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Improving enzymes by error


29 January 2008

Mutant enzymes could make for greener chemical synthesis, say UK scientists.

Cytochrome P450

Luet-Lok Wong's group from the University of Oxford have grown variant forms of a cytochrome P450 monooxygenase (P450) enzyme which can oxidise hydrocarbons under ambient conditions with greatly improved efficiency and selectivity over the natural enzyme.

'Biocatalysis is an increasingly important branch of chemical synthesis which avoids the use of high temperatures and pressures and is typically pollution-free,' explained Wong. P450 enzymes are metabolic enzymes found in all types of life. They typically catalyse the insertion of an oxygen atom into a C-H bond. 'Potential applications for the new variants being explored include the production of fine chemicals, flavours and fragrances, the degradation of environmental contaminants such as dioxins, and the preparation of drug metabolites from pharmaceuticals,' said Wong.

Working with the soil bacterium Bacillus megaterium, Wong's team used a variation of the PCR (polymerase chain reaction) technique to copy the DNA from which the enzyme is made. Using an "error-prone" PCR introduced changes in the DNA to create several new artificial P450 enzymes. A simple screening test - can this variant turn indole into indigo? - identified promising variants. The team went on to pick out variants which efficiently oxidised naphthalene, propylbenzene and pentane.

"Using an "error-prone" PCR introduced changes in the DNA to create several new artificial P450 enzymes"
'It is intriguing that preselection with one small substrate, indole, allowed isolation of efficient catalysts for several different reactions. This seems to contradict the accepted principle that "you get what you screen for",' said Elizabeth Gillam, an expert on P450 enzymes from the University of Queensland, Brisbane, Australia.

Wong accepts that there is a way to go before commercial biosynthesis is practical. 'Scaling up P450 reactions is the greatest single challenge. Control over the regio- and stereo-selectivity of oxidation also needs to be considerably enhanced before chemicals can be manipulated to order,' he said.

Clare Boothby

Link to journal article

Evolved CYP102A1 (P450BM3) variants oxidise a range of non-natural substrates and offer new selectivity options
Christopher J. C. Whitehouse, Stephen G. Bell, Henry G. Tufton, Richard J. P. Kenny, Lydia C. I. Ogilvie and Luet-Lok Wong, Chem. Commun., 2008, 966
DOI: 10.1039/b718124h

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