Issue 18, 2009

Modeling of synthetic phosphono and carba analogues of N-acetyl-α-d-mannosamine 1-phosphate, the repeating unit of the capsular polysaccharide from Neisseria meningitidis serovar A

Abstract

The conformational behavior of methyl (2-acetamido-2-deoxy-α-D-mannopyranosyl)phosphate 1, and its analogues, methyl C-(2-acetamido-2-deoxy-α-D-mannopyranosyl)methanephosphonate 2 and methyl O-(2-acetamido-2-deoxy-5a-carba-α-D-mannopyranosyl)phosphate 3, where a methylene group replaces, respectively, the anomeric and the pyranose oxygen atom, was investigated at the B3LYP/6-311+G(d,p) level [6-311+G(2df,p) for the phosphorus atom]. The energy of the optimized structures was recalculated using the continuum solvent model C-PCM choosing water as the solvent. The compounds exhibited several populated conformations, but they all showed a marked preference for the 4C1 geometry of the pyranose ring; this preference was almost complete for 1, very large for the phosphono analogue 2, and large for the carba analogue 3. To give experimental support to these results, compounds 2 and 3 were synthesized and characterized by NMR spectroscopy. The comparison of the theoretical and experimental vicinal coupling constants confirmed the marked preference for the 4C1 geometry in the case of 2 and suggested that the same holds true for compound 3.

Graphical abstract: Modeling of synthetic phosphono and carba analogues of N-acetyl-α-d-mannosamine 1-phosphate, the repeating unit of the capsular polysaccharide from Neisseria meningitidis serovar A

Supplementary files

Article information

Article type
Paper
Submitted
07 Apr 2009
Accepted
15 Jun 2009
First published
10 Jul 2009

Org. Biomol. Chem., 2009,7, 3734-3740

Modeling of synthetic phosphono and carba analogues of N-acetyl-α-D-mannosamine 1-phosphate, the repeating unit of the capsular polysaccharide from Neisseria meningitidis serovar A

L. Toma, L. Legnani, A. Rencurosi, L. Poletti, L. Lay and G. Russo, Org. Biomol. Chem., 2009, 7, 3734 DOI: 10.1039/B907000A

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