Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Identification type 100ug_R1 Identification type 100ug_R2 Experiment 100ug_R1 Experiment 100ug_R2 Intensity Intensity 100ug_R1 Intensity 100ug_R2 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Deamidation (NQ) site IDs Oxidation (M) site IDs Phospho (STY) site IDs MS/MS Count AAAAAATAPPSPGPAQPGPR AAPARAPRAAAAAATA GPAQPGPRAQRAAPLA R A A P R A 8 1 0 0 0 1 0 2 0 0 0 0 0 0 6 1 1 0 0 0 0 0 20 0 1754.9064 Q6SPF0 Q6SPF0 151 170 SAMD1 Atherin yes yes 2;3 5.8693E-14 118.32 By MS/MS By MS/MS 2 2 207640000 113750000 93888000 0 2167 0 0;1;2;3 0;1;2;3;4;5;6;7;8 2 4321 9 AAAAAATAPPSPGPAQPGPRAQR AAPARAPRAAAAAATA QPGPRAQRAAPLAAPP R A A Q R A 9 2 0 0 0 2 0 2 0 0 0 0 0 0 6 1 1 0 0 0 0 0 23 1 2110.1032 Q6SPF0 Q6SPF0 151 173 SAMD1 Atherin yes yes 3 0.015372 44.382 By MS/MS By matching 1 1 11216000 4579500 6636600 1 2167 1 4;5 9 9 4321 1 AAAAAWEEPSSGNGTAR ________________ SSGNGTARAGPRKRGG K A A A R A 6 1 1 0 0 0 2 2 0 0 0 0 0 0 1 2 1 1 0 0 0 0 17 0 1644.7492 Q9P258 Q9P258 6 22 RCC2 Protein RCC2 yes yes 2 4.4669E-16 137.39 By MS/MS By MS/MS 1 1 14597000 8242700 6353800 2 2782 2 6;7 10;11 10 30 5711;7079 2 AAAAGLGHPASPGGSEDGPPGSEEEDAAR MAALAAMRAAAAGLGH SEEEDAAREGTPGSPG R A A A R E 7 1 0 2 0 0 4 6 1 0 1 0 0 0 4 3 0 0 0 0 0 0 29 0 2659.1746 Q99856 Q99856 67 95 ARID3A AT-rich interactive domain-containing protein 3A yes yes 3 0.010268 43.612 By MS/MS By matching 1 1 13877000 10228000 3648400 3 2562 3 8;9 12 12 5172;5173 1 AAAAPGASPSPGGDAAWSEAGPGPRPLAR RASREGGRAAAAPGAS PGPRPLARSASPPKAK R A A A R S 9 2 0 1 0 0 1 5 0 0 1 0 0 0 6 3 0 1 0 0 0 0 29 1 2641.2997 P52701;F8WAX8;F8W7G9 P52701 34 62 MSH6 DNA mismatch repair protein Msh6 yes no 3 0.0016269 52.227 By MS/MS 1 51630000 0 51630000 4 1754 4 10 13 13 3312 1 AAAGPLDMSLPSTPDIK AADEDEKKAAAGPLDM LPSTPDIKIKEEEPVE K A A I K I 3 0 0 2 0 0 0 1 0 1 2 1 1 0 3 2 1 0 0 0 0 0 17 0 1682.8549 K7ELQ4 K7ELQ4 89 105 yes yes 2 2.324E-15 131.72 By MS/MS By MS/MS 1 1 8366000 5057900 3308000 5 1279 5 11;12 14;15 14 6572 2 AAAGSPRSPGPLPGAR DHGLLLERAAAGSPRS PGPLPGARGLHLPDAG R A A A R G 4 2 0 0 0 0 0 3 0 0 1 0 0 0 4 2 0 0 0 0 0 0 16 1 1460.7848 Q96A47 Q96A47 150 165 ISL2 Insulin gene enhancer protein ISL-2 yes yes 3 0.0048519 62.68 By MS/MS By MS/MS 1 1 17993000 8621100 9372300 6 2453 6 13;14 16;17 16 4942;4943 2 AAALSLSTLASPK HRKHTQQRAAALSLST LSTLASPKGGSGTAGT R A A P K G 4 0 0 0 0 0 0 0 0 0 3 1 0 0 1 3 1 0 0 0 0 0 13 0 1228.7027 P98172 P98172 277 289 EFNB1 Ephrin-B1 yes yes 2 0.0061283 69.602 By MS/MS By matching 1 1 1693000 886940 806050 7 1821 7 15;16 18 18 3407;6761 1 AAATPESQEPQAK EGTAQEGKAAATPESQ ESQEPQAKGAEASAAS K A A A K G 4 0 0 0 0 2 2 0 0 0 0 1 0 0 2 1 1 0 0 0 0 0 13 0 1326.6416 P49006 P49006 145 157 MARCKSL1 MARCKS-related protein yes yes 2 3.6669E-28 175.6 By MS/MS By MS/MS 2 1 46827000 28006000 18820000 8 1721 8 17;18;19 19;20;21;22;23;24 24 6714 6 AAAYDISEDEED PANLSRHKAAAYDISE DISEDEED________ K A A E D - 3 0 0 3 0 0 3 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 12 0 1326.5099 P49585 P49585 356 367 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 2 0.00014811 113.69 By MS/MS By MS/MS 1 1 61956000 33121000 28835000 9 1725 9 20;21 25;26 25 3234 2 AADISLDNLVEGK EAVTPLTKAADISLDN LDNLVEGKRKRRSNVS K A A G K R 2 0 1 2 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 1 0 0 13 0 1343.6933 Q12888;A6NNK5;H7BZY0 Q12888 1614 1626 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0038015 77.192 By MS/MS By MS/MS 1 1 6798800 3910500 2888300 10 1882 10 22;23 27;28 27 3570 2 AADPPAENSSAPEAEQGGAE PQDGKETKAADPPAEN EAEQGGAE________ K A A A E - 6 0 1 1 0 1 4 2 0 0 0 0 0 0 3 2 0 0 0 0 0 0 20 0 1896.7973 H0Y449;P67809 H0Y449 355 374 YBX1 Nuclease-sensitive element-binding protein 1 yes no 2 0.0019995 67.645 By matching By MS/MS 1 1 18910000 11750000 7159500 11 1015 11 24;25 29 29 1873;1874 1 AADRLPNLSSPSAEGPPGPPSGPAPR KFLEERAKAADRLPNL PPSGPAPRKKTQEKDD K A A P R K 4 2 1 1 0 0 1 3 0 0 2 0 0 0 8 4 0 0 0 0 0 0 26 1 2494.2564 O60784 O60784 453 478 TOM1 Target of Myb protein 1 yes yes 3 2.6082E-05 67.827 By MS/MS By MS/MS 1 1 79274000 41785000 37489000 12 1421 12 26;27 30;31 31 2614;2615 2 AADSDDGAVSAPAASDGGVSK ________________ ASDGGVSKSTTSGEEL M A A S K S 6 0 0 4 0 0 0 3 0 0 0 1 0 0 1 4 0 0 0 2 0 0 21 0 1846.8181 Q96GM8 Q96GM8 2 22 TOE1 Target of EGR1 protein 1 yes yes 2 2.3503E-68 174.87 By MS/MS By MS/MS 1 1 122050000 61763000 60290000 13 2489 13 28;29 32;33 33 5017 2 AAEAGGAEEQYGFLTTPTK YVMAVVDKAAEAGGAE GFLTTPTKQLGAQSPG K A A T K Q 4 0 0 0 0 1 3 3 0 0 1 1 0 1 1 0 3 0 1 0 0 0 19 0 1939.9163 P46821 P46821 1052 1070 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 5.8427E-182 241.76 By MS/MS By MS/MS 2 2 53650000 25206000 28444000 14 1712 14 30;31;32;33 34;35;36;37 34 7609 4 AAEDEEVPAFFKNLGSGSPKPR AERKQSGKAAEDEEVP GSGSPKPRQKFCGMFC K A A P R Q 3 1 1 1 0 0 3 2 0 0 1 2 0 2 3 2 0 0 0 1 0 0 22 2 2345.1652 A0A1C7CYX9 A0A1C7CYX9 10 31 yes yes 3 0.02607 44.089 By matching By MS/MS 1 1 8189300 4606300 3583000 15 385 15 34;35 38 38 733;734 1 AAESETPGKSPEK LPASETPKAAESETPG TPGKSPEKKPKIKEEA K A A E K K 2 0 0 0 0 0 3 1 0 0 0 2 0 0 2 2 1 0 0 0 0 0 13 1 1329.6412 O76021;J3QSV6 O76021 418 430 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.0086127 68.262 By MS/MS By matching 1 1 19274000 10893000 8380600 16 1454 16 36;37 39 39 2688 1 AAESLTAIPEPASPQLLETPIHASQIQK NQRWGAVRAAESLTAI IHASQIQKVEPAGRSR R A A Q K V 5 0 0 0 0 3 3 0 1 3 3 1 0 0 4 3 2 0 0 0 0 0 28 0 2939.5604 Q14676 Q14676 1763 1790 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3;4 0.00014693 63.63 By MS/MS By MS/MS 1 2 181730000 101280000 80452000 17 1951 17 38;39;40 40;41;42 41 3768;3769 3 AAESLTAIPEPASPQLLETPIHASQIQKVEPAGR NQRWGAVRAAESLTAI QKVEPAGRSRFTPELQ R A A G R S 6 1 0 0 0 3 4 1 1 3 3 1 0 0 5 3 2 0 0 1 0 0 34 1 3548.8839 Q14676 Q14676 1763 1796 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 4 2.0829E-05 59.732 By MS/MS By MS/MS 1 1 85967000 48307000 37659000 18 1951 18 41;42 43;44 44 3768;3769 2 AAESPDQKDTDGGPKEEESPV GKPNEVTKAAESPDQK PKEEESPV________ K A A P V - 2 0 0 3 0 1 4 2 0 0 0 2 0 0 3 2 1 0 0 1 0 0 21 2 2184.9659 P53985 P53985 480 500 SLC16A1 Monocarboxylate transporter 1 yes yes 3 0.0010433 67.478 By MS/MS By MS/MS 2 2 228370000 120800000 107570000 19 1764 19 43;44;45;46 45;46 46 3328;3329 2 AAFDDAIAELDTLSEESYK DRACRLAKAAFDDAIA TLSEESYKDSTLIMQL K A A Y K D 4 0 0 3 0 0 3 0 0 1 2 1 0 1 0 2 1 0 1 0 0 0 19 0 2086.9583 P62258;K7EM20 P62258 197 215 YWHAE 14-3-3 protein epsilon yes no 2 1.4482E-97 203.17 By MS/MS By MS/MS 1 1 32234000 18630000 13604000 20 1793 20 47;48 47;48 47 3368 2 AAFSKDESKEPIVEVR GKDMEEGKAAFSKDES KEPIVEVRTEEERTPN K A A V R T 2 1 0 1 0 0 3 0 0 1 0 2 0 1 1 2 0 0 0 2 0 0 16 2 1803.9367 A0A0D9SF98;A0A087WWJ5;A0A0D9SF30;A0A087WTF6;A0A087WX77;A0A087WWD4;A0A087WV75;P13591 A0A0D9SF98 276 291 NCAM1 Neural cell adhesion molecule 1 yes no 3 0.00014172 92.236 By MS/MS By MS/MS 1 1 14377000 7275300 7101500 21 24 21 49;50 49;50 49 50 2 AAFTTPDHAPLSPQSSVASSGSEQTEEQGSSR SPEELGARAAFTTPDH TEEQGSSRNTFQEDGS R A A S R N 4 1 0 1 0 3 3 2 1 0 1 0 0 1 3 8 3 0 0 1 0 0 32 0 3245.4709 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3 M0QZ22 260 291 SAMD4B Protein Smaug homolog 2 yes no 3 0.011881 41.483 By MS/MS By matching 1 1 50066000 23035000 27031000 22 1308 22 51;52 51 51 2343 1 AAGAGKVTKSAQK VIKAVDKKAAGAGKVT KVTKSAQKAQKAK___ K A A Q K A 4 0 0 0 0 1 0 2 0 0 0 3 0 0 0 1 1 0 0 1 0 0 13 2 1215.6935 P68104;A0A087WVQ9;Q5VTE0 P68104 445 457 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 3 0.0090475 89.136 By MS/MS By matching 1 1 4946800 2379200 2567600 23 1809 23 53;54 52 52 6748 1 AAGALGSASSGSMPNLAAR QRQRQRQRAAGALGSA SMPNLAARGGAGGAGG R A A A R G 6 1 1 0 0 0 0 3 0 0 2 0 1 0 1 4 0 0 0 0 0 0 19 0 1687.8312 Q9P2Q2 Q9P2Q2 789 807 FRMD4A FERM domain-containing protein 4A yes yes 2 6.224E-10 118.66 By MS/MS By MS/MS 1 2 13311000 7772900 5538100 24 2798 24 55;56;57 53;54 53 5739 2 AAGGAPSPPPPVR GLKSRGSRAAGGAPSP PSPPPPVRRASAGPAP R A A V R R 3 1 0 0 0 0 0 2 0 0 0 0 0 0 5 1 0 0 0 1 0 0 13 0 1172.6302 Q4KMP7 Q4KMP7 672 684 TBC1D10B TBC1 domain family member 10B yes yes 2 0.0012987 101.61 By MS/MS By MS/MS 1 1 36263000 19752000 16511000 25 2047 25 58;59 55;56;57;58;59;60 56 4006 6 AAGISLIVPGKSPTR PNNPDLAKAAGISLIV VPGKSPTRKKSGPFGS K A A T R K 2 1 0 0 0 0 0 2 0 2 1 1 0 0 2 2 1 0 0 1 0 0 15 1 1465.8617 F2Z357;J3KPC5;P47736 F2Z357 473 487 RAP1GAP Rap1 GTPase-activating protein 1 yes no 3 0.00059571 80.975 By MS/MS By MS/MS 1 1 2704600 1524900 1179700 26 853 26 60;61 61;62 61 1541 2 AAGMSSPGAQSHPEELPR LRAERAEKAAGMSSPG SHPEELPRGASTPSEK K A A P R G 3 1 0 0 0 1 2 2 1 0 1 0 1 0 3 3 0 0 0 0 0 0 18 0 1820.8475 M0R300;M0R0P8;Q13459;M0QZY4;M0R2J3 M0R300 712 729 MYO9B Unconventional myosin-IXb yes no 3 0.0060645 54.974 By MS/MS By MS/MS 1 1 10949000 5972700 4976100 27 1315 27 62;63 63;64 63 2362;2363 2 AAGSPSSSDQDEKLPGQDESTAGTSEQNDILK ACWRDGGKAAGSPSSS SEQNDILKVVEKRIAC K A A L K V 3 0 1 4 0 3 3 3 0 1 2 2 0 0 2 6 2 0 0 0 0 0 32 1 3261.4757 E7EPN9;Q9Y520 E7EPN9 186 217 PRRC2C Protein PRRC2C yes no 3 0.012268 41.375 By matching By MS/MS 1 1 37781000 23553000 14228000 28 715 28 64;65 65 65 1266 1 AAHTEDINACTLTTSPR ASEPSLHRAAHTEDIN CTLTTSPRLPVF____ R A A P R L 3 1 1 1 1 0 1 0 1 1 1 0 0 0 1 1 4 0 0 0 0 0 17 0 1856.8687 H7C155;P04049 H7C155 507 523 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 3 5.6038E-06 106.42 By MS/MS By MS/MS 1 1 20605000 11888000 8717000 29 1167 29 66;67 66;67 66 2120;6547 2 AAHTEDINACTLTTSPRLPVF ASEPSLHRAAHTEDIN TSPRLPVF________ R A A V F - 3 1 1 1 1 0 1 0 1 1 2 0 0 1 2 1 4 0 0 1 0 0 21 1 2313.1423 H7C155;P04049 H7C155 507 527 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 3 3.877E-09 98.165 By MS/MS By MS/MS 1 1 34707000 18973000 15734000 30 1167 30 68;69 68;69 68 2120;6547 2 AAIDWFDGK FDDPPSAKAAIDWFDG AIDWFDGKEFHGNIIK K A A G K E 2 0 0 2 0 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 0 0 9 0 1021.4869 A0A075B7D9;H3BPE7;P35637;Q92804 A0A075B7D9 207 215 TAF15;FUS RNA-binding protein FUS;TATA-binding protein-associated factor 2N yes no 2 0.0092067 85.161 By MS/MS By MS/MS 1 1 2200900 953620 1247300 31 17 31 70;71 70;71 70 2 AAKLSEGSQPAEEEEDQETPSR SSRVRQARAAKLSEGS EDQETPSRNLRVRADR R A A S R N 3 1 0 1 0 2 6 1 0 0 1 1 0 0 2 3 1 0 0 0 0 0 22 1 2387.0725 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 178 199 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 1.9645E-05 77.66 By MS/MS By MS/MS 2 2 106950000 60313000 46634000 32 725 32;33 72;73;74;75 72;73;74;75;76 74 1289;1290 5 AAKNSEEEEEEK ALTAQNGKAAKNSEEE SEEEEEEKKKAAVVVS K A A E K K 2 0 1 0 0 0 6 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 12 1 1391.6052 A0A0A0MRM9;Q14978 A0A0A0MRM9 568 579 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0029591 89.747 By MS/MS By matching 1 1 9541400 5618900 3922500 33 191 34 76;77 77 77 340 1 AAKPGPAEAPSPTASPSGDASPPATAPYDPR TDSTASSRAAKPGPAE ATAPYDPRVLAAGGLG R A A P R V 8 1 0 2 0 0 1 2 0 0 0 1 0 0 9 4 2 0 1 0 0 0 31 1 2930.4046 Q9UPT8;M0QY97 Q9UPT8 1094 1124 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 3 2.5558E-16 92.225 By matching By MS/MS 2 2 108760000 55317000 53445000 34 2870 35;36 78;79;80;81 78;79 78 5918;5919;5920 2 AALAPAKESPR SGKTHQIRAALAPAKE APAKESPRKGAAPTPP R A A P R K 4 1 0 0 0 0 1 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 11 1 1109.6193 Q13428;J3KQ96;E7ETY2;H0YAB7 Q13428 898 908 TCOF1 Treacle protein yes no 2;3 2.2002E-06 130.19 By MS/MS By MS/MS 2 2 337400000 176430000 160970000 35 1915 37 82;83;84;85 80;81;82;83 82 3675 4 AALASLPK A A P K 3 0 0 0 0 0 0 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 8 0 769.46979 REV__I3L2H8 yes no 2 0.016827 76.064 By MS/MS 1 1765000 1765000 0 + 36 2978 38 86 84 84 6165 1 AALEYLGSFDHYAT DQYQLCYRAALEYLGS GSFDHYAT________ R A A A T - 3 0 0 1 0 0 1 1 1 0 2 0 0 1 0 1 1 0 2 0 0 0 14 0 1556.7147 H0Y380;H0Y4H1;H0Y7Z9;H0Y6Z7;P10586;Q3KPI9;F5GWR7;P23468 H0Y380 966 979 PTPRF;PTPRD Receptor-type tyrosine-protein phosphatase F;Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta yes no 2 1.5169E-05 118.18 By MS/MS By MS/MS 1 1 165540000 87295000 78240000 37 1010 39 87;88 85;86 86 6505;7434 2 AALLKASPK NEVKKLQKAALLKASP ALLKASPKKAPGTKGT K A A P K K 3 0 0 0 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 9 1 897.56475 P50914 P50914 133 141 RPL14 60S ribosomal protein L14 yes yes 2 0.0044782 109.39 By MS/MS By MS/MS 1 1 562080000 316210000 245860000 38 1740 40 89;90 87;88 88 3294 2 AALQELLSK KIRGSLARAALQELLS ALQELLSKGLIKLVSK R A A S K G 2 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 971.56515 P62851 P62851 86 94 RPS25 40S ribosomal protein S25 yes yes 2 0.0071861 106.68 By MS/MS By MS/MS 1 1 3598000 1944700 1653200 39 1802 41 91;92 89;90 90 2 AALSSPR KPPKSRRKAALSSPRS KAALSSPRSRKNATQP K A A P R S 2 1 0 0 0 0 0 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 7 0 700.38679 Q68E01 Q68E01 991 997 INTS3 Integrator complex subunit 3 yes yes 2 0.0059621 106.42 By MS/MS 1 0 0 0 40 2136 42 93 91 91 4246;4247 1 AAMYDIISSPSKDSTK DEKEQSEKAAMYDIIS SPSKDSTKLTLRLSRV K A A T K L 2 0 0 2 0 0 0 0 0 2 0 2 1 0 1 4 1 0 1 0 0 0 16 1 1712.8291 Q6KC79 Q6KC79 342 357 NIPBL Nipped-B-like protein yes yes 2;3 3.9243E-24 154.47 By MS/MS By MS/MS 1 2 22407000 2196100 20211000 41 2147 43;44 94;95;96 92;93;94;95 95 289 4264;4265 4 AAPEASSPPASPLQHLLPGK AGESPQPKAAPEASSP LQHLLPGKAVDLGPPK K A A G K A 4 0 0 0 0 1 1 1 1 0 3 1 0 0 5 3 0 0 0 0 0 0 20 0 1967.0476 Q96TA1 Q96TA1 686 705 FAM129B Niban-like protein 1 yes yes 2;3 8.8045E-09 97.776 By MS/MS By MS/MS 2 3 96726000 51814000 44911000 42 2546 45 97;98;99;100;101 96;97;98;99;100;101 98 5150;5151;5152 6 AAPPPPPPPPPLESSPR TISPSKEKAAPPPPPP PPLESSPRVKSPSKQA K A A P R V 2 1 0 0 0 0 1 0 0 0 1 0 0 0 10 2 0 0 0 0 0 0 17 0 1702.9043 Q5T4S7 Q5T4S7 606 622 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 3 4.0711E-08 118.52 By MS/MS By MS/MS 1 1 14755000 9021100 5734100 43 2096 46 102;103 102;103;104 102 4142;4143 3 AAPQSPSVPK QELVNQSKAAPQSPSV PQSPSVPKKPGPPVLS K A A P K K 2 0 0 0 0 1 0 0 0 0 0 1 0 0 3 2 0 0 0 1 0 0 10 0 980.5291 E9PF10;O75694 E9PF10 924 933 NUP155 Nuclear pore complex protein Nup155 yes no 2 0.00010617 116.84 By MS/MS By MS/MS 1 1 64484000 31935000 32549000 44 775 47 104;105 105;106 106 1401;1402 2 AAPREEPLTPR GRPPAPPRAAPREEPL REEPLTPRLKPEGAPE R A A P R L 2 2 0 0 0 0 2 0 0 0 1 0 0 0 3 0 1 0 0 0 0 0 11 1 1235.6622 A0A0A0MTP6;O15357 A0A0A0MTP6 884 894 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 3 0.0048744 71.806 By MS/MS By MS/MS 1 2 7328900 2917700 4411100 45 250 48 106;107;108 107;108 108 6290 2 AAQQAASSSGQGQQAQTPTGF DWTMLKQKAAQQAASS QAQTPTGF________ K A A G F - 5 0 0 0 0 6 0 3 0 0 0 0 0 1 1 3 2 0 0 0 0 0 21 0 2019.9246 D6REM4;E7ETM0 D6REM4 216 236 CSNK1A1 yes no 2 5.1722E-08 94.325 By matching By MS/MS 1 1 16822000 7405100 9416900 46 674 49 109;110 109 109 6395 1 AAQQLQQEGGLGPPPPPPPSPR MKRQAKDKAAQQLQQE PPPPPSPRRVAVPVLV K A A P R R 2 1 0 0 0 4 1 3 0 0 2 0 0 0 8 1 0 0 0 0 0 0 22 0 2218.1495 Q9H2Z4 Q9H2Z4 252 273 NKX2-4 Homeobox protein Nkx-2.4 yes yes 3 0.00017914 72.569 By MS/MS By MS/MS 1 1 6324800 3882200 2442600 47 2650 50 111;112 110;111;112;113 111 5403 4 AASAATAAPTATPAAQESGTIPK TNECKARRAASAATAA QESGTIPKKRQEVMKW R A A P K K 9 0 0 0 0 1 1 1 0 1 0 1 0 0 3 2 4 0 0 0 0 0 23 0 2082.0593 B8ZZ81;O00116 B8ZZ81 63 85 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes no 2;3 1.4161E-19 118.46 By MS/MS By MS/MS 1 2 24588000 8931700 15656000 48 529 51 113;114;115 114;115;116 115 968 3 AASAPAKESPR SGKTSQVGAASAPAKE APAKESPRKGAAPAPP G A A P R K 4 1 0 0 0 0 1 0 0 0 0 1 0 0 2 2 0 0 0 0 0 0 11 1 1083.5673 Q13428;J3KQ96;E7ETY2 Q13428 373 383 TCOF1 Treacle protein yes no 2;3 0.00082553 94.781 By MS/MS By MS/MS 2 2 574280000 330650000 243630000 49 1915 52 116;117;118;119 117;118;119;120;121;122 122 3676 6 AASAPAKESPRK SGKTSQVGAASAPAKE PAKESPRKGAAPAPPG G A A R K G 4 1 0 0 0 0 1 0 0 0 0 2 0 0 2 2 0 0 0 0 0 0 12 2 1211.6622 Q13428;J3KQ96;E7ETY2 Q13428 373 384 TCOF1 Treacle protein yes no 3 0.004682 72.615 By matching By MS/MS 1 1 6315100 2658400 3656700 50 1915 53 120;121 123 123 3676 1 AASITSEVFNK GELNLMKKAASITSEV ITSEVFNKFFKERVME K A A N K F 2 0 1 0 0 0 1 0 0 1 0 1 0 1 0 2 1 0 0 1 0 0 11 0 1165.5979 Q9Y5B9 Q9Y5B9 186 196 SUPT16H FACT complex subunit SPT16 yes yes 2 0.0029282 86.911 By MS/MS By MS/MS 1 1 1936800 0 1936800 51 2928 54 122;123 124;125 125 6082 2 AASKGEGPEAGAPIR A A I R 4 1 0 0 0 0 2 3 0 1 0 1 0 0 2 1 0 0 0 0 0 0 15 1 1409.7263 REV__H3BU16 yes no 3 0.01312 52.101 By MS/MS By matching 2 1 3884700 3336000 548640 + 52 2967 55 124;125;126 126 126 6152 1 AASLNYLNQPSAAPLQVSR PSSSNMKRAASLNYLN AAPLQVSRGLSASTMD R A A S R G 4 1 2 0 0 2 0 0 0 0 3 0 0 0 2 3 0 0 1 1 0 0 19 0 1999.0487 Q9NSK0 Q9NSK0 588 606 KLC4 Kinesin light chain 4 yes yes 2;3 7.0231E-39 161.08 By MS/MS By MS/MS 2 2 88804000 44793000 44011000 53 2729 56 127;128;129;130 127;128;129;130 127 5576 4 AASLTEDRDR SQPEGLRKAASLTEDR SLTEDRDRGRDAVKRE K A A D R G 2 2 0 2 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 10 1 1132.5473 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1044 1053 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 3.0326E-05 125.97 By MS/MS By MS/MS 2 2 73207000 34547000 38659000 54 740 57 131;132;133;134 131;132;133;134 134 1333 4 AASMFYGRLVAVATLRNHR ________________ VATLRNHRPRTAQRAA - A A H R P 4 3 1 0 0 0 0 1 1 0 2 0 1 1 0 1 1 0 1 2 0 0 19 2 2132.1425 A0A0U1RQU7;Q5T9Q8;A0A0U1RQF8;Q9P2R7 A0A0U1RQU7 1 19 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes no 3 0.011643 49.425 By MS/MS By matching 1 1 922500000 685610000 236900000 55 338 58 135;136 135 135 7243 1 AASPESASSTPESLQAR GDEDASGRAASPESAS TPESLQARRHHQFLEP R A A A R R 4 1 0 0 0 1 2 0 0 0 1 0 0 0 2 5 1 0 0 0 0 0 17 0 1687.8013 Q96BT3 Q96BT3 395 411 CENPT Centromere protein T yes yes 2 0.00044783 78.249 By MS/MS By MS/MS 1 1 17092000 8833700 8258700 56 2461 59 137;138 136;137 136 4959 2 AASPPASASDLIEQQQK IKVIRNMRAASPPASA DLIEQQQKRGRREHKA R A A Q K R 4 0 0 1 0 3 1 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 17 0 1739.869 Q5VSL9 Q5VSL9 333 349 STRIP1 Striatin-interacting protein 1 yes yes 2;3 3.5159E-07 112.57 By MS/MS By MS/MS 2 2 62582000 32961000 29622000 57 2113 60 139;140;141;142 138;139;140;141 139 4184 4 AASPPASASDLIEQQQKR IKVIRNMRAASPPASA LIEQQQKRGRREHKAL R A A K R G 4 1 0 1 0 3 1 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 18 1 1895.9701 Q5VSL9 Q5VSL9 333 350 STRIP1 Striatin-interacting protein 1 yes yes 3 2.7346E-06 95.5 By MS/MS By MS/MS 1 1 37486000 19576000 17910000 58 2113 61 143;144 142;143;144;145;146 144 4184 5 AASPSPQSVR PEPKKIKKAASPSPQS SPSPQSVRRVSSSRSV K A A V R R 2 1 0 0 0 1 0 0 0 0 0 0 0 0 2 3 0 0 0 1 0 0 10 0 998.51451 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 745 754 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0013759 92.792 By MS/MS By MS/MS 1 1 20459000 11049000 9409300 59 442 62 145;146 147;148;149;150;151;152;153;154 148 830;831;832 8 AASQGSDSPLLPAQR AKGRLAERAASQGSDS SPLLPAQRNSIPVSPV R A A Q R N 3 1 0 1 0 2 0 1 0 0 2 0 0 0 2 3 0 0 0 0 0 0 15 0 1496.7583 H0Y507;Q5TCZ1 H0Y507 963 977 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.00047941 88.108 By MS/MS By MS/MS 1 1 11070000 6142200 4927400 60 1022 63 147;148 155;156 156 1894 2 AASREEPIEWEF SIIHRLEKAASREEPI EEPIEWEF________ K A A E F - 2 1 0 0 0 0 4 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 12 1 1462.6729 P39880 P39880 1494 1505 CUX1 Homeobox protein cut-like 1 yes yes 2 0.0034103 87.519 By MS/MS By MS/MS 1 1 114500000 55119000 59381000 61 1682 64 149;150 157;158 157 3096 2 AASSAAQGAFQGN FSSRTFHRAASSAAQG AQGAFQGN________ R A A G N - 5 0 1 0 0 2 0 2 0 0 0 0 0 1 0 2 0 0 0 0 0 0 13 0 1178.5316 O15127 O15127 317 329 SCAMP2 Secretory carrier-associated membrane protein 2 yes yes 2 0.0065884 68.171 By MS/MS By MS/MS 1 1 12103000 6366900 5735600 62 1360 65 151;152 159;160 159 2485;2486 2 AASSSSPGSPVASSPSR FEKPESPRAASSSSPG PVASSPSRLSPTPDGP R A A S R L 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 8 0 0 0 1 0 0 17 0 1530.7274 Q92538 Q92538 1776 1792 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 3.2956E-07 113.07 By MS/MS By MS/MS 3 2 30405000 18358000 12047000 63 2421 66;67 153;154;155;156;157 161;162;163;164;165 162 4864;4865;4866 5 AASSSSVVPYLPR EVAEELGRAASSSSVV SVVPYLPRLPILPSKT R A A P R L 2 1 0 0 0 0 0 0 0 0 1 0 0 0 2 4 0 0 1 2 0 0 13 0 1332.7038 P42684 P42684 559 571 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.00093311 91.636 By MS/MS By MS/MS 1 1 5327700 2966500 2361200 64 1699 68 158;159 166;167 167 7602 2 AASTDLGAGETVVGK RGRRQAKKAASTDLGA AGETVVGKVLEITELP K A A G K V 3 0 0 1 0 0 1 3 0 0 1 1 0 0 0 1 2 0 0 2 0 0 15 0 1374.6991 H7C207;Q15032 H7C207 695 709 R3HDM1 R3H domain-containing protein 1 yes no 2 6.3195E-29 162.88 By MS/MS By MS/MS 1 1 15444000 9813500 5630800 65 1172 69 160;161 168;169 168 2130 2 AASVAAATTSPTPR VTQRRTRRAASVAAAT ATTSPTPRTTRGRRKS R A A P R T 5 1 0 0 0 0 0 0 0 0 0 0 0 0 2 2 3 0 0 1 0 0 14 0 1299.6783 Q9Y2D9 Q9Y2D9 195 208 ZNF652 Zinc finger protein 652 yes yes 2 0.0078717 65.225 By MS/MS By matching 2 2 13026000 6512400 6513300 66 2887 70;71 162;163;164;165 170;171 171 6020;6021;7120 1 AASVPCSVAPEK QRRDGGGRAASVPCSV PCSVAPEKSVCRPQPL R A A E K S 3 0 0 0 1 0 1 0 0 0 0 1 0 0 2 2 0 0 0 2 0 0 12 0 1214.5965 D6RFX7;Q9C073 D6RFX7 65 76 FAM117A Protein FAM117A yes no 2 0.0077863 70.438 By MS/MS By matching 1 1 11482000 5998600 5483500 67 678 72 166;167 172 172 1203 1 AATESVPCSPSPLAGEIR VHRQDMCKAATESVPC SPLAGEIRRGTSAASR K A A I R R 3 1 0 0 1 0 2 1 0 1 1 0 0 0 3 3 1 0 0 1 0 0 18 0 1840.8989 J3QKZ5;J9JIE4;J3QS16;Q8N9M1 J3QKZ5 49 66 C19orf47 Uncharacterized protein C19orf47 yes no 2 1.0593E-05 94.532 By MS/MS By MS/MS 1 1 18039000 9758900 8280300 68 1248 73 168;169 173;174;175;176 174 2259;2260;2261 4 AATKSPQPTPGR CWGPHLNRAATKSPQP SPQPTPGRSRQGSVPD R A A G R S 2 1 0 0 0 1 0 1 0 0 0 1 0 0 3 1 2 0 0 0 0 0 12 1 1209.6466 O94761 O94761 85 96 RECQL4 ATP-dependent DNA helicase Q4 yes yes 2 0.024268 61.657 By MS/MS By matching 1 1 8941300 4510700 4430600 69 1458 74 170;171 177 177 1 AATKSPQSTPGRSR CWGPHLNRAATKSPQS QSTPGRSRQGSVPDYG R A A S R Q 2 2 0 0 0 1 0 1 0 0 0 1 0 0 2 3 2 0 0 0 0 0 14 2 1442.759 V9GYB6;A0A087WZ30 V9GYB6 43 56 RECQL4 yes no 2 0.025001 44.425 By MS/MS 1 0 0 0 70 107 75 172 178 178 1 AATSGVPSIYAPSTYAHLSPAK EALYAAGKAATSGVPS YAHLSPAKTPPPPAMI K A A A K T 5 0 0 0 0 0 0 1 1 1 1 1 0 0 3 4 2 0 2 1 0 0 22 0 2188.1164 S4R3V8;Q86X29 S4R3V8 266 287 LSR Lipolysis-stimulated lipoprotein receptor yes no 2;3 3.7227E-09 89.557 By MS/MS By MS/MS 2 3 72050000 29932000 42118000 71 2250 76;77 173;174;175;176;177 179;180;181;182 180 4509;4510;6946;7773;7774 4 AAVEEGIVLGGGCALLR TDALNATRAAVEEGIV GGGCALLRCIPALDSL R A A L R C 3 1 0 0 1 0 2 4 0 1 3 0 0 0 0 0 0 0 0 2 0 0 17 0 1683.8978 P10809 P10809 430 446 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2;3 0.012753 79.82 By MS/MS By matching 2 1 5039300 3818700 1220600 72 1557 78 178;179;180 183;184 183 2 AAVGEEKDINTFVGTPVEK GKAMHTPKAAVGEEKD FVGTPVEKLDLLGNLP K A A E K L 2 0 1 1 0 0 3 2 0 1 0 2 0 1 1 0 2 0 0 3 0 0 19 1 2003.0211 P46013 P46013 1909 1927 MKI67 Antigen KI-67 yes yes 3 0.027296 44.089 By MS/MS 1 1583000 1583000 0 73 1704 79 181 185 185 1 AAVGQESPGGLEAGNAK PINKGRKRAAVGQESP GLEAGNAKAPKLQDLA R A A A K A 4 0 1 0 0 1 2 4 0 0 1 1 0 0 1 1 0 0 0 1 0 0 17 0 1554.7638 Q29RF7 Q29RF7 1299 1315 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 2.3191E-102 210.2 By MS/MS By MS/MS 1 1 80678000 47556000 33122000 74 2026 80 182;183 186;187 186 3960 2 AAVGQESPGGLEAGNAKAPK PINKGRKRAAVGQESP AGNAKAPKLQDLAKKA R A A P K L 5 0 1 0 0 1 2 4 0 0 1 2 0 0 2 1 0 0 0 1 0 0 20 1 1850.9486 Q29RF7 Q29RF7 1299 1318 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 0.0064799 51.942 By MS/MS By MS/MS 1 1 19278000 10016000 9261400 75 2026 81 184;185 188;189 189 3960 2 AAVLSDSEDEEKASAK EEKVAKRKAAVLSDSE DEEKASAKKSRVVSDA K A A A K K 4 0 0 2 0 0 3 0 0 0 1 2 0 0 0 3 0 0 0 1 0 0 16 1 1648.7792 Q96ST2 Q96ST2 394 409 IWS1 Protein IWS1 homolog yes yes 2 1.6144E-05 114.06 By MS/MS By MS/MS 1 1 51303000 29256000 22047000 76 2541 82 186;187 190;191 191 5123;5124 2 AAVPSGASTGIYEALELR FTSKGLFRAAVPSGAS IYEALELRDNDKTRYM R A A L R D 4 1 0 0 0 0 2 2 0 1 2 0 0 0 1 2 1 0 1 1 0 0 18 0 1803.9367 P06733;K7EM90;F5H1C3;E5RI09;E5RG95;K7EPM1;K7EKN2;E5RGZ4;F5H0C8;P13929;P09104 P06733 33 50 ENO1;ENO2;ENO3 Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase yes no 2;3 1.2287E-26 139.48 By MS/MS By MS/MS 3 2 21869000 15856000 6013100 77 1532 83;84 188;189;190;191;192 192;193;194;195 194 6658 4 AAVQELSSSILAGEDPEER HRSTPESRAAVQELSS AGEDPEERGVKLGLGD R A A E R G 3 1 0 1 0 1 4 1 0 1 2 0 0 0 1 3 0 0 0 1 0 0 19 0 1999.9698 P49768;E7ES96 P49768 359 377 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12;Presenilin yes no 2;3 7.3252E-07 105.38 By MS/MS By MS/MS 3 3 51672000 27658000 24014000 78 1728 85;86 193;194;195;196;197;198 196;197;198;199;200;201 197 3241;3242;3243 6 AAVSAFPTDSLER QSFFAAARAAVSAFPT FPTDSLERDLSPSSAP R A A E R D 3 1 0 1 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 1 0 0 13 0 1362.6779 O14654 O14654 1098 1110 IRS4 Insulin receptor substrate 4 yes yes 2 2.3811E-12 152.88 By MS/MS By MS/MS 1 1 59765000 30277000 29488000 79 1343 87 199;200 202;203 203 2434 2 AAVVTSPPPTTAPHKER ________________ TTAPHKERYFDRVDEN R A A E R Y 3 1 0 0 0 0 1 0 1 0 0 1 0 0 4 1 3 0 0 2 0 0 17 1 1757.9424 P35611;E7EV99;E7ENY0;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 7 23 ADD1 Alpha-adducin yes no 3 0.007406 54.393 By MS/MS By MS/MS 1 1 95528000 41709000 53818000 80 1673 88 201;202 204;205 205 3081 2 AAYGDLSSEEEEENEPESLGVVYK TRDSGKQKAAYGDLSS ESLGVVYKSTRSAKPV K A A Y K S 2 0 1 1 0 0 7 2 0 0 2 1 0 0 1 3 0 0 2 2 0 0 24 0 2643.1712 O15541 O15541 78 101 RNF113A RING finger protein 113A yes yes 2;3 6.3993E-06 78.373 By MS/MS By MS/MS 2 2 64567000 36258000 28309000 81 1369 89 203;204;205;206 206;207;208 206 2503;2504;7518 3 AAYGDLSSEEEEENEPESLGVVYKSTR TRDSGKQKAAYGDLSS GVVYKSTRSAKPVGPE K A A T R S 2 1 1 1 0 0 7 2 0 0 2 1 0 0 1 4 1 0 2 2 0 0 27 1 2987.352 O15541 O15541 78 104 RNF113A RING finger protein 113A yes yes 3 0.013982 46.145 By MS/MS By matching 1 1 52884000 27575000 25309000 82 1369 90 207;208 209 209 2503;2504;7518 1 ACASPSAQVEGSPVAGSDGSQPAVK LSLSPSKRACASPSAQ DGSQPAVKLEPLHFLQ R A C V K L 5 0 0 1 1 2 1 3 0 0 0 1 0 0 3 5 0 0 0 3 0 0 25 0 2356.0965 F8WDB4;Q9UFC0 F8WDB4 96 120 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 0.014122 43.92 By MS/MS By MS/MS 2 2 42608000 23993000 18616000 83 950 91;92 209;210;211;212 210;211 211 1720;1721 2 ACKVDSPTVTTTLK GEYGGWYKACKVDSPT PTVTTTLKNLGALYRR K A C L K N 1 0 0 1 1 0 0 0 0 0 1 2 0 0 1 1 4 0 0 2 0 0 14 1 1519.7916 H0YG16;G3V5R9;G3V3H3;H0YJU9;H0YJL0;H0YJT3;G5E9S8;G3V2E7;F8W6L3;E7EVH7;Q07866 H0YG16 61 74 KLC1 Kinesin light chain 1 yes no 2 0.0036048 77.562 By matching By MS/MS 1 1 7229800 4415300 2814600 84 1071 93 213;214 212 212 1976 1 ACPEEPAAPSPEPR ELASPEERACPEEPAA AAPSPEPRVWLEDPAS R A C P R V 3 1 0 0 1 0 3 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 14 0 1506.6773 O94819 O94819 98 111 KBTBD11 Kelch repeat and BTB domain-containing protein 11 yes yes 2 0.00081168 99.069 By MS/MS By MS/MS 1 1 13774000 7695900 6078600 85 1464 94 215;216 213;214 213 2716 2 ACPGPPPPSPEPLAR DDSSRPSRACPGPPPP PSPEPLARLALAMELS R A C A R L 2 1 0 0 1 0 1 1 0 0 1 0 0 0 7 1 0 0 0 0 0 0 15 0 1541.766 A0A087WSV0;Q9HB09 A0A087WSV0 181 195 BCL2L12 Bcl-2-like protein 12 yes no 2 0.0049443 65.467 By MS/MS By matching 1 1 5103600 2583900 2519700 86 19 95 217;218 215 215 42 1 ACSMPQELPQSPR LPEVETIRACSMPQEL QELPQSPRTRQPEPDF R A C P R T 1 1 0 0 1 2 1 0 0 0 1 0 1 0 3 2 0 0 0 0 0 0 13 0 1499.6861 Q8N5J2 Q8N5J2 93 105 FAM63A Protein FAM63A yes yes 2 1.5461E-10 132.65 By MS/MS By matching 1 1 33298000 19922000 13376000 87 2318 96 219;220 216 216 4655 1 ADADPSPTSPPTAR ________________ PTSPPTARDTPGRQAE R A D A R D 3 1 0 2 0 0 0 0 0 0 0 0 0 0 4 2 2 0 0 0 0 0 14 0 1381.6474 Q9NWZ5 Q9NWZ5 8 21 UCKL1 Uridine-cytidine kinase-like 1 yes yes 2 0.011761 62.166 By MS/MS 1 3829800 3829800 0 88 2748 97 221 217 217 5623 0 ADAPDAGAQSDSELPSYHQNDVSLDR AALQATARADAPDAGA QNDVSLDRGYTSDSEV R A D D R G 4 1 1 5 0 2 1 1 1 0 2 0 0 0 2 4 0 0 1 1 0 0 26 0 2757.2114 Q92538 Q92538 1289 1314 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 3 4.8607E-08 83.064 By MS/MS By MS/MS 1 2 221400000 110060000 111340000 89 2421 98 222;223;224 218;219 219 4867 2 ADDADEFGYSR LWRYGDFRADDADEFG ADEFGYSR________ R A D S R - 2 1 0 3 0 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 11 0 1244.4946 Q7KZF4 Q7KZF4 900 910 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 2.3276E-14 164.97 By MS/MS By MS/MS 1 1 9493400 5346400 4147000 90 2197 99 225;226 220;221 220 7768 2 ADDFPVRDDPSDVTDEDEGPAEPPPPPKLPLPAFR EGSDTQRRADDFPVRD KLPLPAFRLKNDSDLF R A D F R L 3 2 0 7 0 0 3 1 0 0 2 1 0 2 10 1 1 0 0 2 0 0 35 2 3797.8061 H0Y4Z8;Q3YEC7;A0A0X1KG72 H0Y4Z8 587 621 RABL6 Rab-like protein 6 yes no 4 0.000197 52.268 By MS/MS By MS/MS 1 1 14898000 8644200 6253400 91 1021 100 227;228 222;223 222 1892;6511 2 ADEASELACPTPK KLQELSSKADEASELA ELACPTPKEDGLAQQQ K A D P K E 3 0 0 1 1 0 2 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 13 0 1387.6289 A0A0U1RQF0;P49327 A0A0U1RQF0 2192 2204 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 2.6247E-11 148.57 By MS/MS By MS/MS 1 1 16756000 7031600 9724700 92 337 101 229;230 224;225 224 6307 2 ADEASELACPTPKEDGLAQQQTQLNLR KLQELSSKADEASELA QQTQLNLRSLLVNPEG K A D L R S 4 1 1 2 1 4 3 1 0 0 4 1 0 0 2 1 2 0 0 0 0 0 27 1 2982.4353 A0A0U1RQF0;P49327 A0A0U1RQF0 2192 2218 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 3 1.5324E-42 133.68 By MS/MS By MS/MS 1 1 27191000 13967000 13224000 93 337 102 231;232 226;227;228 228 6307 3 ADEGISFR AQDYGVLKADEGISFR ADEGISFRGLFIIDDK K A D F R G 1 1 0 1 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 8 0 893.4243 A0A0A0MSI0;Q06830 A0A0A0MSI0 121 128 PRDX1 Peroxiredoxin-1 yes no 2 0.028295 77.282 By MS/MS By MS/MS 1 1 5839600 3183400 2656200 94 214 103 233;234 229;230 229 2 ADEICIAGSPLTPR MPPQNLERADEICIAG AGSPLTPRRVTEVRAD R A D P R R 2 1 0 1 1 0 1 1 0 2 1 0 0 0 2 1 1 0 0 0 0 0 14 0 1498.745 Q08999;F5H837 Q08999 631 644 RBL2 Retinoblastoma-like protein 2 yes no 2 0.0022527 88.427 By MS/MS By MS/MS 1 1 8908500 4984500 3924100 95 1867 104 235;236 231;232 232 3511;6772 2 ADGGAEYATYQTK QRRKKKGKADGGAEYA EYATYQTKSTTPAEQR K A D T K S 3 0 0 1 0 1 1 2 0 0 0 1 0 0 0 0 2 0 2 0 0 0 13 0 1373.6099 R4GN18 R4GN18 57 69 CD46 yes yes 2 0.0007529 99.539 By MS/MS By MS/MS 1 1 10657000 5900100 4756900 96 2956 105 237;238 233;234;235 235 7966;7967 3 ADGYEPPVQESV ETGAKVERADGYEPPV EPPVQESV________ R A D S V - 1 0 0 1 0 1 2 1 0 0 0 0 0 0 2 1 0 0 1 2 0 0 12 0 1289.5776 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 216 227 RPS3A 40S ribosomal protein S3a yes no 2 3.1087E-05 118.03 By MS/MS By MS/MS 3 3 53153000 27511000 25642000 97 652 106;107 239;240;241;242;243;244 236;237;238;239 236 1171;7342 3 ADHRSSPNVANQPPSPGGK DDRLMKNRADHRSSPN QPPSPGGKSAYASGTT R A D G K S 2 1 2 1 0 1 0 2 1 0 0 1 0 0 4 3 0 0 0 1 0 0 19 1 1914.9296 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1127 1145 MLLT4 Afadin yes no 3 0.011906 51.386 By MS/MS By matching 1 1 4429200 2534400 1894800 98 431 108 245;246 240 240 812;813 1 ADIVFLLDGSINFR PSRPEKKKADIVFLLD LDGSINFRRDSFQEVL K A D F R R 1 1 1 2 0 0 0 1 0 2 2 0 0 2 0 1 0 0 0 1 0 0 14 0 1578.8406 E7ENL6;P12111 E7ENL6 1031 1044 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0014329 99.752 By MS/MS By MS/MS 3 2 4996600 3023400 1973200 99 710 109 247;248;249;250;251 241;242;243;244 243 4 ADIVFLVDGSYSIGIANFVK CSRGVDIKADIVFLVD IGIANFVKVRAFLEVL K A D V K V 2 0 1 2 0 0 0 2 0 3 1 1 0 2 0 2 0 0 1 3 0 0 20 0 2127.1252 D6RGG3;Q99715 D6RGG3 439 458 COL12A1 Collagen alpha-1(XII) chain yes no 2 1.7466E-08 98.943 By matching By MS/MS 1 1 6013400 2209400 3804000 100 679 110 252;253 245 245 1 ADLGPGSPPWAVK LGTSRLTRADLGPGSP GSPPWAVKTEAVSGDC R A D V K T 2 0 0 1 0 0 0 2 0 0 1 1 0 0 3 1 0 1 0 1 0 0 13 0 1293.6717 A0A087WVC5;A0A0C4DH65;A5PL33 A0A087WVC5 204 216 KRBA1 Protein KRBA1 yes no 2 0.0085705 66.285 By MS/MS By matching 1 1 3366800 1493000 1873700 101 61 111 254;255 246 246 108 1 ADLINNLGTIAK DTGIGMTKADLINNLG NNLGTIAKSGTKAFME K A D A K S 2 0 2 1 0 0 0 1 0 2 2 1 0 0 0 0 1 0 0 0 0 0 12 0 1241.698 P07900;Q14568;P08238;Q58FF8 P08238 96 107 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2 0.0013667 105.17 By MS/MS By MS/MS 1 1 17298000 10182000 7116000 102 1542;1540 112 256;257 247;248 248 2 ADLIQARASAATPK A D P K 5 1 0 1 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 0 0 0 14 1 1411.7783 REV__A2RUC4 yes yes 3 0.0063797 60.157 By MS/MS 1 1901400 0 1901400 + 103 2966 113 258 249 249 6151;7143 1 ADLNQGIGEPQSPSR LSAKLLRRADLNQGIG GEPQSPSRRVFNPYTE R A D S R R 1 1 1 1 0 2 1 2 0 1 1 0 0 0 2 2 0 0 0 0 0 0 15 0 1567.759 Q96C19 Q96C19 63 77 EFHD2 EF-hand domain-containing protein D2 yes yes 2 0.00035965 100.69 By MS/MS By MS/MS 1 1 18264000 9787600 8476400 104 2465 114 259;260 250;251 251 4964;4965 2 ADQPVEEGESASLAKK A D K K 3 0 0 1 0 1 3 1 0 0 1 2 0 0 1 2 0 0 0 1 0 0 16 1 1657.8159 REV__O95831 yes yes 3 0.018921 43.12 By MS/MS 1 3983000 0 3983000 + 105 2984 115 261 252 252 6172;6173 1 ADRDQSPFSK SNNSREKKADRDQSPF RDQSPFSKIKQSSQDN K A D S K I 1 1 0 2 0 1 0 0 0 0 0 1 0 1 1 2 0 0 0 0 0 0 10 1 1149.5415 E9PG73;Q13427 E9PG73 667 676 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 2 0.0097049 74.237 By MS/MS By matching 1 1 11361000 3830300 7530900 106 789 116 262;263 253 253 1416 1 ADSGPTQPPLSLSPAPETK EAPPGWDRADSGPTQP LSPAPETKRPGQAAKK R A D T K R 2 0 0 1 0 1 1 1 0 0 2 1 0 0 5 3 2 0 0 0 0 0 19 0 1891.9527 F1T0I1;J3KNL6;O15027;A0A0C4DH09;X6RGP5 F1T0I1 2071 2089 SEC16A Protein transport protein Sec16A yes no 2;3 4.0119E-06 90.412 By MS/MS By matching 2 2 52977000 26411000 26566000 107 846 117 264;265;266;267 254;255;256 254 1521;1522 3 ADSPVNGLPK LEGAKKAKADSPVNGL SPVNGLPKGRESRSRS K A D P K G 1 0 1 1 0 0 0 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 10 0 996.52401 Q96S94;A0A0A0MSF3 Q96S94 367 376 CCNL2 Cyclin-L2 yes no 2 0.0025162 87.713 By MS/MS By MS/MS 1 1 13668000 8054900 5612700 108 2540 118 268;269 257;258 257 5120 2 AEADIVLLVDGSWSIGR SGMECLTRAEADIVLL DGSWSIGRANFRTVRS R A E G R A 2 1 0 2 0 0 1 2 0 2 2 0 0 0 0 2 0 1 0 2 0 0 17 0 1799.9418 D6RGG3;Q99715;A0A087X0A8 D6RGG3 1196 1212 COL12A1 Collagen alpha-1(XII) chain yes no 2;3 4.5488E-46 174.46 By MS/MS By MS/MS 6 7 43275000 21678000 21597000 109 679 119 270;271;272;273;274;275;276;277;278;279;280;281;282 259;260;261;262;263;264;265;266;267;268;269 265 11 AEADKIYSFTDNAPSPSIGGSSR QSRLASIKAEADKIYS PSIGGSSRLENTTPTQ K A E S R L 3 1 1 2 0 0 1 2 0 2 0 1 0 1 2 5 1 0 1 0 0 0 23 1 2369.1135 O15014 O15014 790 812 ZNF609 Zinc finger protein 609 yes yes 3 2.4484E-05 75.797 By MS/MS By MS/MS 1 1 8303100 4587300 3715800 110 1351 120 283;284 270;271 270 2461;2462 2 AEAGAGSATEFQFR VPPGADKKAEAGAGSA SATEFQFRGGFGRGRG K A E F R G 4 1 0 0 0 1 2 2 0 0 0 0 0 2 0 1 1 0 0 0 0 0 14 0 1440.6634 P46783;Q9NQ39 P46783 140 153 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 2 0.00081285 101.72 By MS/MS By MS/MS 1 1 6497400 3399700 3097700 111 1711 121 285;286 272;273 272 3168 2 AEAPPLEREDSGTFSLGK ________________ SGTFSLGKMITAKPGK R A E G K M 2 1 0 1 0 0 3 2 0 0 2 1 0 1 2 2 1 0 0 0 0 0 18 1 1902.9323 G5E9Q4;O75569 G5E9Q4 8 25 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 3 0.0049068 56.768 By MS/MS By MS/MS 1 1 37710000 20650000 17060000 112 996 122 287;288 274;275 275 1824 2 AEDGATPSPSNETPK ASSTSSPKAEDGATPS SPSNETPKKKKKRFSF K A E P K K 2 0 1 1 0 0 2 1 0 0 0 1 0 0 3 2 2 0 0 0 0 0 15 0 1499.674 P29966 P29966 138 152 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 3.1395E-101 213.35 By MS/MS By MS/MS 5 2 111580000 63178000 48402000 113 1648 123;124 289;290;291;292;293;294;295 276;277;278;279;280;281;282;283;284;285;286;287 277 3042;3043;6691 9 AEDGATPSPSNETPKK ASSTSSPKAEDGATPS PSNETPKKKKKRFSFK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 2 0 0 3 2 2 0 0 0 0 0 16 1 1627.7689 P29966 P29966 138 153 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 3.4198E-05 107.63 By MS/MS By MS/MS 2 2 28879000 17587000 11292000 114 1648 125 296;297;298;299 288;289;290 289 3042;3043;6691 3 AEDGATPSPSNETPKKK ASSTSSPKAEDGATPS SNETPKKKKKRFSFKK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 3 0 0 3 2 2 0 0 0 0 0 17 2 1755.8639 P29966 P29966 138 154 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 4.6602E-05 107.41 By MS/MS By MS/MS 2 1 120120000 83043000 37074000 115 1648 126 300;301;302 291;292;293 293 3042;3043;6691 3 AEDQTESSCESHR ASARRKPRAEDQTESS ESSCESHRKSKKEKKK R A E H R K 1 1 0 1 1 1 3 0 1 0 0 0 0 0 0 3 1 0 0 0 0 0 13 0 1534.5954 Q9BU76 Q9BU76 171 183 MMTAG2 Multiple myeloma tumor-associated protein 2 yes yes 2 0.0090291 65.956 By MS/MS By matching 1 1 8923600 4385700 4538000 116 2582 127 303;304 294 294 5217 1 AEEDEILNR EEEDRKPKAEEDEILN EEDEILNRSPRNRKPR K A E N R S 1 1 1 1 0 0 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1087.5146 P27824 P27824 574 582 CANX Calnexin yes yes 2 0.00367 117.4 By MS/MS By MS/MS 1 1 3288300 1900900 1387400 117 1638 128 305;306 295;296 295 2 AEEDEILNRSPR EEEDRKPKAEEDEILN EILNRSPRNRKPRRE_ K A E P R N 1 2 1 1 0 0 3 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1427.7005 P27824 P27824 574 585 CANX Calnexin yes yes 2;3 0.0074814 98.582 By MS/MS By MS/MS 4 4 4356600000 2248600000 2107900000 118 1638 129;130 307;308;309;310;311;312;313;314 297;298;299;300 300 3025 4 AEEKENDTVTISPK LAPEANPKAEEKENDT DTVTISPKQEGFPPKG K A E P K Q 1 0 1 1 0 0 3 0 0 1 0 2 0 0 1 1 2 0 0 1 0 0 14 1 1559.7679 Q9UGU0 Q9UGU0 1511 1524 TCF20 Transcription factor 20 yes yes 2;3 7.0155E-13 137.39 By MS/MS By MS/MS 2 2 19820000 10043000 9776500 119 2810 131 315;316;317;318 301;302;303 303 5758 3 AEEKSPISINVK PSSPREVKAEEKSPIS SPISINVKTVKKEPED K A E V K T 1 0 1 0 0 0 2 0 0 2 0 2 0 0 1 2 0 0 0 1 0 0 12 1 1313.7191 Q9UK58 Q9UK58 348 359 CCNL1 Cyclin-L1 yes yes 2;3 1.081E-77 214.58 By MS/MS By MS/MS 2 2 134060000 73045000 61014000 120 2825 132 319;320;321;322 304;305;306 304 5804 3 AEEQLILPMSSSPPK A E P K 1 0 0 0 0 1 2 0 0 1 2 1 1 0 3 3 0 0 0 0 0 0 15 0 1625.8335 REV__Q14118 yes yes 2 0.0085545 61.815 By MS/MS By matching 2 1 309420000 231630000 77791000 + 121 2994 133 323;324;325 307 307 6185 1 AEFAEYASVDR PGPQTEGKAEFAEYAS AEYASVDRNKKCRQSV K A E D R N 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 11 0 1256.5673 Q9NWQ8 Q9NWQ8 222 232 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 8.535E-07 148.91 By MS/MS By MS/MS 1 1 22368000 14748000 7619800 122 2746 134 326;327 308;309 309 7907 2 AEFLNKSVQK SSLKIEERAEFLNKSV FLNKSVQKSSGVKSTH R A E Q K S 1 0 1 0 0 1 1 0 0 0 1 2 0 1 0 1 0 0 0 1 0 0 10 1 1162.6346 C9J813;E9PGZ1;E7EX44;Q05682 C9J813 395 404 CALD1 Caldesmon no no 2 0.0079209 75.739 By matching By MS/MS 1 1 4682000 2587200 2094800 123 567;753 135 328;329 310 310 1045 1 AEFTSPPSLFK ETALPSTKAEFTSPPS TSPPSLFKTGLPPSRN K A E F K T 1 0 0 0 0 0 1 0 0 0 1 1 0 2 2 2 1 0 0 0 0 0 11 0 1222.6234 Q6UN15;A0A0B4J203 Q6UN15 255 265 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 2 0.0001701 112.64 By MS/MS By MS/MS 1 2 7261000 2470300 4790700 124 2168 136 330;331;332 311;312;313;314;315 315 4322;4323 5 AEGEAEEESDFDVFPSSPR PGPWSLPRAEGEAEEE DVFPSSPRCPQLPGGG R A E P R C 2 1 0 2 0 0 5 1 0 0 0 0 0 2 2 3 0 0 0 1 0 0 19 0 2096.8811 B1AL69;Q7L3B6 B1AL69 16 34 CDC37L1 Hsp90 co-chaperone Cdc37-like 1 yes no 2 0.0065126 59.227 By MS/MS By matching 1 1 3670800 2101300 1569500 125 461 137 333;334 316 316 889 1 AEGEPQEESPLK SQEKQTKKAEGEPQEE PQEESPLKSKSQEEPK K A E L K S 1 0 0 0 0 1 4 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 12 0 1312.6147 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 169 180 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0010804 101.43 By MS/MS By MS/MS 1 1 14295000 7275300 7019800 126 2759 138 335;336 317;318 318 5641 2 AEGEPQEESPLKSK SQEKQTKKAEGEPQEE EESPLKSKSQEEPKDT K A E S K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 2 0 0 0 0 0 0 14 1 1527.7417 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 169 182 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 6.6122E-46 189.04 By MS/MS By MS/MS 1 1 33999000 15961000 18037000 127 2759 139 337;338 319;320 320 5641 2 AEGEWEDQEALDYFSDKESGK EKGSEKGRAEGEWEDQ FSDKESGKQKFNDSEG R A E G K Q 2 0 0 3 0 1 5 2 0 0 1 2 0 1 0 2 0 1 1 0 0 0 21 1 2432.0292 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 371 391 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 2.9078E-10 103.14 By MS/MS By MS/MS 2 2 198470000 91223000 107250000 128 2759 140 339;340;341;342 321;322;323;324 324 5642;5643 4 AEGEWEDQEALDYFSDKESGKQK EKGSEKGRAEGEWEDQ DKESGKQKFNDSEGDD R A E Q K F 2 0 0 3 0 2 5 2 0 0 1 3 0 1 0 2 0 1 1 0 0 0 23 2 2688.1827 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 371 393 BCLAF1 Bcl-2-associated transcription factor 1 yes no 4 0.010901 42.123 By matching By MS/MS 1 1 6760900 3824100 2936800 129 2759 141 343;344 325 325 5642;5643 1 AEGIREPKVTGK DSSQPAGKAEGIREPK REPKVTGKLKQRSPKL K A E G K L 1 1 0 0 0 0 2 2 0 1 0 2 0 0 1 0 1 0 0 1 0 0 12 2 1283.7197 P46087 P46087 686 697 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0.026487 57.567 By MS/MS By matching 1 1 39001000 22864000 16137000 130 1707 142 345;346 326 326 0 AEIYALNR QELKQRQRAEIYALNR AEIYALNRVMTELEQQ R A E N R V 2 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 8 0 948.50288 Q8N300 Q8N300 37 44 CCDC23 Coiled-coil domain-containing protein 23 yes yes 2 0.0028711 114.78 By MS/MS By MS/MS 1 1 12398000 7945800 4451800 131 2301 143 347;348 327;328 328 7796 2 AEKASSYQMK PKSPNSVKAEKASSYQ KASSYQMKSEKVPSSP K A E M K S 2 0 0 0 0 1 1 0 0 0 0 2 1 0 0 2 0 0 1 0 0 0 10 1 1141.5438 X6R5G7;E9PRG2;E9PKY2;A0A0C4DFM7;Q5TAX3 X6R5G7 140 149 ZCCHC11 Terminal uridylyltransferase 4 yes no 2 0.017487 46.457 By MS/MS 1 0 0 0 132 263 144 349 329 329 26 480;481;7216 1 AELSYLVDRPR SNETKHQRAELSYLVD SYLVDRPRRVNSSAFQ R A E P R R 1 2 0 1 0 0 1 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 11 1 1317.7041 Q9P2E7 Q9P2E7 883 893 PCDH10 Protocadherin-10 yes yes 2 0.014213 68.846 By MS/MS 1 1814200 1814200 0 133 2789 145 350 330 330 5726 1 AELSYRGPVSGTEPEPVYSMEAADYR YEDAASFKAELSYRGP SMEAADYREASSQQGL K A E Y R E 3 2 0 1 0 0 4 2 0 0 1 0 1 0 3 3 1 0 3 2 0 0 26 1 2873.3178 Q14247;H0YEV2;H0YCD9 Q14247 429 454 CTTN Src substrate cortactin yes no 3 0.014988 43.156 By MS/MS 1 3455900 0 3455900 134 1945 146 351 331 331 3751;7698;7699 1 AENGLLMTPCYTANFVAPEVLKR FGFAKQLRAENGLLMT VAPEVLKRQGYDEGCD R A E K R Q 3 1 2 0 1 0 2 1 0 0 3 1 1 1 2 0 2 0 1 2 0 0 23 1 2593.3033 P51812;E9PGT3;Q15418 E9PGT3 555 577 RPS6KA3;RPS6KA1 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 no no 3 2.1161E-09 87.652 By MS/MS By MS/MS 2 2 33673000 21536000 12138000 135 796;1746 147;148 352;353;354;355 332;333;334 333 97 6441 3 AEPQAQPQLQGRQAAPGPQQSQSPSSR GPAALQSKAEPQAQPQ QSQSPSSRQIPSGAAS K A E S R Q 4 2 0 0 0 8 1 2 0 0 1 0 0 0 5 4 0 0 0 0 0 0 27 1 2828.3914 Q9UPA5 Q9UPA5 3739 3765 BSN Protein bassoon yes yes 3 0.0091571 41.763 By matching By MS/MS 1 1 6952500 4106900 2845600 136 2866 149 356;357 335 335 5905;5906;5907 1 AEPSEVDMNSPK KAKQVKKKAEPSEVDM EVDMNSPKSKKAKKKE K A E P K S 1 0 1 1 0 0 2 0 0 0 0 1 1 0 2 2 0 0 0 1 0 0 12 0 1302.5762 Q9NR30 Q9NR30 62 73 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.001018 102.33 By MS/MS By MS/MS 1 1 12495000 7312500 5182300 137 2716 150 358;359 336;337 336 5542 2 AEPVEVVAPR SPWGAEVKAEPVEVVA PVEVVAPRGKSGAALS K A E P R G 2 1 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 3 0 0 10 0 1065.5819 P09874 P09874 487 496 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 5.7657E-05 136.8 By matching By MS/MS 1 1 69744000 41566000 28178000 138 1550 151 360;361 338 338 1 AESGDSLGSEDRDLLYSIDAYR FQRTRVPRAESGDSLG LYSIDAYRSQRFKETE R A E Y R S 2 2 0 4 0 0 2 2 0 1 3 0 0 0 0 4 0 0 2 0 0 0 22 1 2431.1139 Q9NQW6 Q9NQW6 656 677 ANLN Actin-binding protein anillin yes yes 3 0.0025055 56.055 By MS/MS By MS/MS 1 1 16213000 7628100 8585400 139 2713 152 362;363 339;340 340 5535;5536 2 AESLDDQMLSR TSAANGLRAESLDDQM LDDQMLSRESSSQAPY R A E S R E 1 1 0 2 0 1 1 0 0 0 2 0 1 0 0 2 0 0 0 0 0 0 11 0 1263.5765 F8VY01;Q6ZV73 F8VY01 719 729 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 yes no 2 0.0014635 97.463 By MS/MS By matching 1 1 4966100 2891200 2074900 140 926 153 364;365 341 341 1665 1 AESMLQQADK NETDDLKRAESMLQQA SMLQQADKLGCRQFVT R A E D K L 2 0 0 1 0 2 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 10 0 1119.523 A0A0A0MSQ0;P13797;H7C4N2 A0A0A0MSQ0 324 333 PLS3 Plastin-3 yes no 2 0.011221 75.378 By MS/MS 1 2595700 0 2595700 141 221 154 366 342;343 343 2 AESPAEKVPEESVLPLVQK LSSPSDTKAESPAEKV SVLPLVQKSTLADYSA K A E Q K S 2 0 0 0 0 1 4 0 0 0 2 2 0 0 3 2 0 0 0 3 0 0 19 1 2049.0994 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 430 448 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 4.8331E-07 102.9 By MS/MS By MS/MS 1 1 8311200 4001700 4309600 142 725 155 367;368 344;345 345 1291 2 AESPDLR KWQDRYGRAESPDLRR RAESPDLRRLPGAIDV R A E L R R 1 1 0 1 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 7 0 786.38718 Q6UN15;A0A0B4J203 Q6UN15 302 308 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 2 0.010815 131.22 By MS/MS By MS/MS 2 1 20513000 13711000 6801200 143 2168 156 369;370;371 346;347;348;349 349 4324 4 AESPESSAIESTQSTPQK VSRRAQQRAESPESSA STQSTPQKGRGRPSKT R A E Q K G 2 0 0 0 0 2 3 0 0 1 0 1 0 0 2 5 2 0 0 0 0 0 18 0 1875.8698 Q9NTI5 Q9NTI5 1356 1373 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 2;3 1.4015E-27 138.82 By MS/MS By MS/MS 3 3 103230000 57458000 45772000 144 2731 157;158 372;373;374;375;376;377 350;351;352;353 350 5582;5583;7067;7068 4 AESPESSAIESTQSTPQKGR VSRRAQQRAESPESSA QSTPQKGRGRPSKTPS R A E G R G 2 1 0 0 0 2 3 1 0 1 0 1 0 0 2 5 2 0 0 0 0 0 20 1 2088.9924 Q9NTI5 Q9NTI5 1356 1375 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 3 0.0032073 61.815 By MS/MS By MS/MS 1 1 60893000 32743000 28150000 145 2731 159 378;379 354;355 355 5582;5583;7067;7068 1 AESPSPAPPPGLR VAEGGLPRAESPSPAP PAPPPGLRGTLDLQVI R A E L R G 2 1 0 0 0 0 1 1 0 0 1 0 0 0 5 2 0 0 0 0 0 0 13 0 1274.6619 Q9BUA3 Q9BUA3 306 318 C11orf84 Uncharacterized protein C11orf84 yes yes 2 0.0012909 102.73 By MS/MS By MS/MS 1 1 68769000 38355000 30414000 146 2583 160 380;381 356;357 357 5220 2 AESYNNVIK A E I K 1 0 2 0 0 0 1 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 9 0 1036.5189 REV__J3KSR0 yes yes 2 0.0037767 97.813 By MS/MS 1 14189000 14189000 0 + 147 2979 161 382 358 358 6166 1 AETPPLPIPPPPPDIQPLER STRSLNERAETPPLPI PDIQPLERYWAAHQQL R A E E R Y 1 1 0 1 0 1 2 0 0 2 2 0 0 0 9 0 1 0 0 0 0 0 20 0 2173.1783 U3KPW8;Q8IX15 U3KPW8 279 298 HOMEZ Homeobox and leucine zipper protein Homez yes no 3 0.0047479 59.539 By MS/MS 1 3646100 3646100 0 148 2276 162 383 359;360 359 6949 2 AETPTESVSEPEVATK PKPLKTSKAETPTESV SEPEVATKQELQEEEE K A E T K Q 2 0 0 0 0 0 4 0 0 0 0 1 0 0 2 2 3 0 0 2 0 0 16 0 1673.7996 M0R0Q7;P18858;B4E135 M0R0Q7 192 207 LIG1 DNA ligase;DNA ligase 1 yes no 2 0.0046814 66.267 By MS/MS By MS/MS 1 1 22836000 11444000 11391000 149 1316 163 384;385 361;362 362 2368 2 AETSEGSGSAPAVPEASASPK AEPAEAGKAETSEGSG PEASASPKQRRSIIRD K A E P K Q 5 0 0 0 0 0 3 2 0 0 0 1 0 0 3 5 1 0 0 1 0 0 21 0 1928.8963 A0A087WVW7;A0A0D9SFX7;B5MCB4;A0A087X1U4;P51608 A0A087WVW7 58 78 MECP2 Methyl-CpG-binding protein 2 yes no 2 0.017938 48.968 By MS/MS By matching 1 1 18850000 9219700 9630000 150 67 164 386;387 363 363 115;116 1 AEVPGATGGDSPHLQPAEPPGEPR ________________ AEPPGEPRREPHPAEA K A E P R R 3 1 0 1 0 1 3 4 1 0 1 0 0 0 6 1 1 0 0 1 0 0 24 0 2365.1299 A0A087WWC8;A0A0A0MQW0;A0A0A0MR39;Q9P2K5 A0A087WWC8 7 30 MYEF2 Myelin expression factor 2 yes no 3 0.00042556 62.099 By MS/MS By matching 1 1 32015000 19759000 12256000 151 75 165 388;389 364 364 129 1 AEYVPSTPSPVPPSTPLLSAHSK ILLGGDYRAEYVPSTP PLLSAHSKTGSRDCST R A E S K T 2 0 0 0 0 0 1 0 1 0 2 1 0 0 6 5 2 0 1 2 0 0 23 0 2361.2216 Q4VCS5;E7ERM3 Q4VCS5 834 856 AMOT Angiomotin yes no 3 5.3271E-05 74.665 By MS/MS By MS/MS 2 2 27519000 15094000 12424000 152 2051 166 390;391;392;393 365;366;367;368 367 4016;4017 4 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR ANVKQAYRAFAAVPTS SPEQLSFRERQKYFEL R A F F R E 7 1 0 1 0 2 2 1 1 0 1 0 0 2 9 3 2 0 0 1 0 0 33 0 3337.6368 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1242 1274 SCRIB Protein scribble homolog yes no 3 0.0045035 46.785 By MS/MS 1 11541000 0 11541000 153 322 167 394 369 369 591;6305 1 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFRER ANVKQAYRAFAAVPTS EQLSFRERQKYFELEV R A F E R Q 7 2 0 1 0 2 3 1 1 0 1 0 0 2 9 3 2 0 0 1 0 0 35 1 3622.7805 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1242 1276 SCRIB Protein scribble homolog yes no 4 1.2503E-05 61.499 By MS/MS By MS/MS 2 2 25682000 13877000 11805000 154 322 168;169 395;396;397;398 370;371;372 371 591;6305 3 AFAGPLSPAKAEDFR RDPVLTLRAFAGPLSP PAKAEDFRKLWKTPPR R A F F R K 4 1 0 1 0 0 1 1 0 0 1 1 0 2 2 1 0 0 0 0 0 0 15 1 1575.8045 Q86XL3 Q86XL3 522 536 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.0011786 71.513 By MS/MS By MS/MS 1 1 3872000 2082400 1789600 155 2252 170 399;400 373;374 373 4517 2 AFAGPLSPAKAEDFRK RDPVLTLRAFAGPLSP AKAEDFRKLWKTPPRE R A F R K L 4 1 0 1 0 0 1 1 0 0 1 2 0 2 2 1 0 0 0 0 0 0 16 2 1703.8995 Q86XL3 Q86XL3 522 537 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.015054 53.377 By MS/MS 1 2231400 0 2231400 156 2252 171 401 375 375 4517 1 AFFSEVER GLKMKTSRAFFSEVER AFFSEVERRFDAMPFT R A F E R R 1 1 0 0 0 0 2 0 0 0 0 0 0 2 0 1 0 0 0 1 0 0 8 0 983.47125 Q9UQ80;F8VR77 Q9UQ80 264 271 PA2G4 Proliferation-associated protein 2G4 yes no 2 0.026157 79.469 By matching By MS/MS 1 1 3597700 2017900 1579800 157 2878 172 402;403 376 376 1 AFGPGLQGGSAGSPAR PTKPSKVKAFGPGLQG GSAGSPARFTIDTKGA K A F A R F 3 1 0 0 0 1 0 5 0 0 1 0 0 1 2 2 0 0 0 0 0 0 16 0 1428.711 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 1072 1087 FLNA Filamin-A yes no 2 7.0245E-10 125.86 By MS/MS By MS/MS 1 1 29917000 14394000 15523000 158 1613 173 404;405 377;378 378 2978 2 AFGPGLQGGSAGSPARFTIDTK PTKPSKVKAFGPGLQG ARFTIDTKGAGTGGLG K A F T K G 3 1 0 1 0 1 0 5 0 1 1 1 0 2 2 2 2 0 0 0 0 0 22 1 2134.0807 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 1072 1093 FLNA Filamin-A yes no 3 0.0010879 60.062 By matching By MS/MS 1 1 5246800 2273700 2973100 159 1613 174 406;407 379 379 2978 1 AFGSGIDIKPGTPPIAGR KMSEMELKAFGSGIDI GTPPIAGRSTTPTSSP K A F G R S 2 1 0 1 0 0 0 4 0 3 0 1 0 1 3 1 1 0 0 0 0 0 18 1 1752.9523 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2664 2681 PRRC2C Protein PRRC2C yes no 3 4.5854E-09 112.17 By MS/MS By MS/MS 1 1 64474000 34598000 29876000 160 715 175 408;409 380;381 381 6416 2 AFGSGYR SRIGSGRRAFGSGYRR RAFGSGYRRDDDYRGG R A F Y R R 1 1 0 0 0 0 0 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 7 0 756.35549 E7EX17;P23588;F8VP89;F8VX11 E7EX17 280 286 EIF4B Eukaryotic translation initiation factor 4B yes no 2 0.014334 95.358 By MS/MS By MS/MS 1 1 12347000 5679900 6667400 161 750 176 410;411 382;383 383 1363 2 AFITNIPFDVK ANPTKRYRAFITNIPF TNIPFDVKWQSLKDLV R A F V K W 1 0 1 1 0 0 0 0 0 2 0 1 0 2 1 0 1 0 0 1 0 0 11 0 1263.6863 A0A087X0X3;P52272;M0R019;M0R0Y6;M0QYQ7;M0R0N3;M0R2T0 A0A087X0X3 73 83 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.018866 69.01 By matching By MS/MS 1 1 2397600 1139700 1258000 162 135 177 412;413 384 384 1 AFLAELEQNSPK KAQAESNKAFLAELEQ ELEQNSPKIQKVKEAL K A F P K I 2 0 1 0 0 1 2 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 12 0 1345.6878 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 1558 1569 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 0.00015748 113.25 By MS/MS By MS/MS 1 1 12233000 7064500 5168900 163 1011 178 414;415 385;386 386 1860 2 AFLSPPTLLEGPLR GWPSSETRAFLSPPTL TLLEGPLRLSPLLPGG R A F L R L 1 1 0 0 0 0 1 1 0 0 4 0 0 1 3 1 1 0 0 0 0 0 14 0 1509.8555 G3V599;O15320;Q96PC5 G3V599 1068 1081 CTAGE5;MIA2 cTAGE family member 5;Melanoma inhibitory activity protein 2 yes no 2 0.0076093 65.092 By MS/MS By matching 1 1 20493000 14216000 6277100 164 980 179 416;417 387 387 1783 1 AFSEDEALAQQENR PMPGPVVRAFSEDEAL ALAQQENRHWRRGTFE R A F N R H 3 1 1 1 0 2 3 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 14 0 1606.7223 Q9C0H5 Q9C0H5 602 615 ARHGAP39 Rho GTPase-activating protein 39 yes yes 2 2.8811E-12 133.66 By MS/MS By matching 1 1 6700100 3403200 3296800 165 2621 180 418;419 388 388 5320 1 AFSEGQITR SRKKTVRRAFSEGQIT FSEGQITRRMNPTRSA R A F T R R 1 1 0 0 0 1 1 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 9 0 1007.5036 Q96GN5 Q96GN5 259 267 CDCA7L Cell division cycle-associated 7-like protein yes yes 2 0.0054531 84.507 By MS/MS By MS/MS 1 1 9110500 4929300 4181200 166 2490 181 420;421 389;390 389 5018 2 AFSFSKTPK KTSKKVTRAFSFSKTP FSFSKTPKRALRRALM R A F P K R 1 0 0 0 0 0 0 0 0 0 0 2 0 2 1 2 1 0 0 0 0 0 9 1 1011.5389 H7C103;Q9H8V3 H7C103 180 188 ECT2 Protein ECT2 yes no 2 0.005642 88.596 By MS/MS By MS/MS 1 1 11048000 6538600 4509700 167 1164 182 422;423 391;392 391 2113 2 AFSPASPCAWNVCVTR SRSQGPEKAFSPASPC AWNVCVTRKAPLLASD K A F T R K 3 1 1 0 2 0 0 0 0 0 0 0 0 1 2 2 1 1 0 2 0 0 16 0 1821.8291 T1ECW5;A0A0A0MSJ8 T1ECW5 517 532 PPP6R2 yes no 2 0.012502 57.434 By matching By MS/MS 1 1 4365500 2065500 2300000 168 3013 183 424;425 393 393 6205 1 AFSTVPLTPVPR ILQSSDSRAFSTVPLT VPLTPVPRPSDSVSST R A F P R P 1 1 0 0 0 0 0 0 0 0 1 0 0 1 3 1 2 0 0 2 0 0 12 0 1283.7238 H0Y5D5;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3 H0Y5D5 482 493 CIZ1 Cip1-interacting zinc finger protein yes no 2 0.0013726 97.214 By matching By MS/MS 1 1 6765900 3832600 2933300 169 882 184 426;427 394 394 1586 1 AFSTVPLTPVPRPSDSVSSTPAATSTPSK ILQSSDSRAFSTVPLT AATSTPSKQALQFFCY R A F S K Q 3 1 0 1 0 0 0 0 0 0 1 1 0 1 6 7 5 0 0 3 0 0 29 1 2884.4818 H0Y5D5;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3 H0Y5D5 482 510 CIZ1 Cip1-interacting zinc finger protein yes no 3 0.014415 42.347 By MS/MS By matching 1 1 7272900 3171100 4101800 170 882 185 428;429 395 395 1586;1587 1 AFSYSGDLR FACKVCEKAFSYSGDL FSYSGDLRVHSRIHTG K A F L R V 1 1 0 1 0 0 0 1 0 0 1 0 0 1 0 2 0 0 1 0 0 0 9 0 1014.4771 K7EK80;Q8NDQ6 K7EK80 419 427 ZNF540 Zinc finger protein 540 yes no 2 0.018858 46.016 By MS/MS 1 0 0 0 171 1273 186 430 396 396 2307;2308;7483 1 AFVDRTPPPAAVAQR DLLVSWQRAFVDRTPP PPAAVAQRTAFGRDAL R A F Q R T 4 2 0 1 0 1 0 0 0 0 0 0 0 1 3 0 1 0 0 2 0 0 15 1 1594.858 Q5JTD0 Q5JTD0 417 431 TJAP1 Tight junction-associated protein 1 yes yes 3 0.00099093 78.225 By MS/MS By MS/MS 1 1 10851000 6195500 4655300 172 2076 187 431;432 397;398 397 6871 2 AFVEDSEDEDGAGEGGSSLLQK KQLKESFRAFVEDSED GGSSLLQKRAKTRQEK R A F Q K R 2 0 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 22 0 2238.9764 H0YFD2;F8WFC1;Q8N9T8 H0YFD2 110 131 KRI1 Protein KRI1 homolog yes no 2;3 4.8817E-44 153.11 By MS/MS By MS/MS 2 2 264000000 142040000 121960000 173 955 188 433;434;435;436 399;400;401;402 399 1729 4 AFVEDSEDEDGAGEGGSSLLQKR KQLKESFRAFVEDSED GSSLLQKRAKTRQEKA R A F K R A 2 1 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 23 1 2395.0775 H0YFD2;F8WFC1;Q8N9T8 H0YFD2 110 132 KRI1 Protein KRI1 homolog yes no 2;3 1.6092E-13 96.391 By MS/MS By MS/MS 2 3 268190000 125130000 143050000 174 955 189 437;438;439;440;441 403;404;405;406 405 1729 4 AGAAAGDSDEESRADDKGVMDYYLK QMMSSVGRAGAAAGDS GVMDYYLKYFSGAHDG R A G L K Y 5 1 0 5 0 0 2 3 0 0 1 2 1 0 0 2 0 0 2 1 0 0 25 2 2633.1551 O95365 O95365 330 354 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 3 0.023218 43.463 By MS/MS By matching 1 1 22186000 11040000 11146000 175 1486 190 442;443 407 407 1 AGAESPTMSVDGR RVHKKDRRAGAESPTM PTMSVDGRQPGTCSPD R A G G R Q 2 1 0 1 0 0 1 2 0 0 0 0 1 0 1 2 1 0 0 1 0 0 13 0 1276.5718 O75362 O75362 403 415 ZNF217 Zinc finger protein 217 yes yes 2 8.778E-11 143.56 By MS/MS By MS/MS 1 1 15782000 7862700 7919400 176 1433 191 444;445 408;409 408 2642 2 AGAGAPVVGSGSSGGGNAFTGLGPVSTLPSLHGK PGVGGKARAGAGAPVV TLPSLHGKQGVTSVTC R A G G K Q 4 0 1 0 0 0 0 10 1 0 3 1 0 1 3 5 2 0 0 3 0 0 34 0 2963.5101 E9PDU5;A0A087X295;Q9NNW5 E9PDU5 485 518 WDR6 WD repeat-containing protein 6 yes no 3 0.00092628 51.871 By matching By MS/MS 1 1 19185000 9522600 9662200 177 146 192 446;447 410 410 6257 1 AGAGMITQHSSNASPINR TRRMGDGRAGAGMITQ SNASPINRIVQISGNS R A G N R I 3 1 2 0 0 1 0 2 1 2 0 0 1 0 1 3 1 0 0 0 0 0 18 0 1810.8744 Q9NWH9;H7C3F4;H0YKH2 Q9NWH9 989 1006 SLTM SAFB-like transcription modulator yes no 2;3 0.0010311 69.07 By MS/MS By MS/MS 3 3 57195000 28136000 29058000 178 2744 193;194 448;449;450;451;452;453 411;412;413;414;415 415 361 5615;5616 5 AGAINATYKVDVIQR YTCRVSNRAGAINATY YKVDVIQRTRSKPVLT R A G Q R T 3 1 1 1 0 1 0 1 0 2 0 1 0 0 0 0 1 0 1 2 0 0 15 1 1617.8839 Q8N441 Q8N441 227 241 FGFRL1 Fibroblast growth factor receptor-like 1 yes yes 2 0.028779 46.352 By MS/MS 1 0 0 0 179 2309 195 454 416 416 7799 1 AGAPGALSPSYDGGLHGLQSK ________________ GLHGLQSKIEDHLDEA R A G S K I 3 0 0 1 0 1 0 5 1 0 3 1 0 0 2 3 0 0 1 0 0 0 21 0 1981.9858 K7ENH8;A0A0A0MRB7;X6REB3;P15923 K7ENH8 8 28 TCF3 Transcription factor E2-alpha yes no 3 1.9446E-08 88.283 By MS/MS By MS/MS 1 1 36999000 19378000 17621000 180 177 196 455;456 417;418 418 315 2 AGAPVGGSPGLAK TEKLPRKRAGAPVGGS GGSPGLAKRGRLQPPS R A G A K R 3 0 0 0 0 0 0 4 0 0 1 1 0 0 2 1 0 0 0 1 0 0 13 0 1080.5928 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2882 2894 SRCAP Helicase SRCAP yes no 2 0.0096713 65.495 By MS/MS By matching 1 1 39532000 20062000 19469000 181 208 197 457;458 419 419 375 1 AGAPVGGSPGLAKR TEKLPRKRAGAPVGGS GSPGLAKRGRLQPPSP R A G K R G 3 1 0 0 0 0 0 4 0 0 1 1 0 0 2 1 0 0 0 1 0 0 14 1 1236.6939 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2882 2895 SRCAP Helicase SRCAP yes no 3 0.00051479 82.837 By MS/MS By MS/MS 1 1 6731000 2542200 4188800 182 208 198 459;460 420;421 420 375 2 AGATASKEPPLYYGVCPVYEDVPAR PSDTDTYRAGATASKE VYEDVPARNERIYVYE R A G A R N 4 1 0 1 1 0 2 2 0 0 1 1 0 0 4 1 1 0 3 3 0 0 25 1 2709.3109 Q86XL3 Q86XL3 188 212 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.026224 44.582 By MS/MS 1 6053200 6053200 0 183 2252 199 461 422 422 7779 0 AGAVPSSPSTPAPPSAK LSSSEPTKAGAVPSSP TPAPPSAKLAEDSALQ K A G A K L 4 0 0 0 0 0 0 1 0 0 0 1 0 0 5 4 1 0 0 1 0 0 17 0 1520.7835 Q9C0C6 Q9C0C6 205 221 CIPC CLOCK-interacting pacemaker yes yes 2 0.00081569 75.376 By matching By MS/MS 1 1 3512700 1555600 1957100 184 2616 200 462;463 423 423 5312 1 AGDDYEVLELDDVPK RHERSLGRAGDDYEVL LELDDVPKENSSGSSP R A G P K E 1 0 0 4 0 0 2 1 0 0 2 1 0 0 1 0 0 0 1 2 0 0 15 0 1676.7781 O43164 O43164 59 73 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 2 2.8292E-10 128.08 By MS/MS By MS/MS 1 1 11259000 5701100 5557900 185 1371 201 464;465 424;425 425 7519 2 AGDLLEDSPK EKGALKRRAGDLLEDS DLLEDSPKRPKEAENP R A G P K R 1 0 0 2 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1043.5135 P51858 P51858 158 167 HDGF Hepatoma-derived growth factor yes yes 2 0.0016491 99.941 By MS/MS By MS/MS 1 1 113450000 62340000 51115000 186 1749 202 466;467 426;427 427 3306 2 AGDLLEDSPKRPK EKGALKRRAGDLLEDS EDSPKRPKEAENPEGE R A G P K E 1 1 0 2 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 0 0 0 13 2 1424.7623 P51858 P51858 158 170 HDGF Hepatoma-derived growth factor yes yes 2;3;4 1.4472E-09 137.21 By MS/MS By MS/MS 3 3 805640000 460400000 345240000 187 1749 203 468;469;470;471;472;473 428;429;430;431;432;433;434;435 433 3306 8 AGDPGEMPQSPTGLGQPK AGLAPKRRAGDPGEMP PTGLGQPKRRGRPPSK R A G P K R 1 0 0 1 0 2 1 4 0 0 1 1 1 0 4 1 1 0 0 0 0 0 18 0 1765.8305 J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9;H0YHL2 J3KPG5 1358 1375 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2;3 1.8556E-38 161.26 By MS/MS By MS/MS 3 3 239570000 131540000 108030000 188 917 204;205 474;475;476;477;478;479 436;437;438;439 437 104 1648 4 AGDPGEMPQSPTGLGQPKR AGLAPKRRAGDPGEMP TGLGQPKRRGRPPSKF R A G K R R 1 1 0 1 0 2 1 4 0 0 1 1 1 0 4 1 1 0 0 0 0 0 19 1 1921.9316 J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9;H0YHL2 J3KPG5 1358 1376 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 3 0.0013234 62.916 By MS/MS By MS/MS 1 1 15226000 8907100 6319100 189 917 206 480;481 440;441 441 1648 2 AGDPGEMPQSPTGLGQPKRR AGLAPKRRAGDPGEMP GLGQPKRRGRPPSKFF R A G R R G 1 2 0 1 0 2 1 4 0 0 1 1 1 0 4 1 1 0 0 0 0 0 20 2 2078.0327 J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9;H0YHL2 J3KPG5 1358 1377 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 3 0.030365 48.623 By MS/MS 1 8583900 8583900 0 190 917 207 482 442 442 1648 0 AGDYTCCDLVVK HIPGWSYRAGDYTCCD TCCDLVVKIKECKKSE R A G V K I 1 0 0 2 2 0 0 1 0 0 1 1 0 0 0 0 1 0 1 2 0 0 12 0 1399.6112 H7C3F8 H7C3F8 54 65 C10orf90 yes yes 2 0.031215 46.457 By MS/MS 1 5269300 5269300 0 191 1181 208 483 443 443 7468 0 AGEEDEGEEDSDSDYEISAKAR KRSRLETRAGEEDEGE YEISAKARYFGYIKQG R A G A R Y 3 1 0 4 0 0 6 2 0 1 0 1 0 0 0 3 0 0 1 0 0 0 22 1 2400.9677 A2RRP1 A2RRP1 463 484 NBAS Neuroblastoma-amplified sequence yes yes 3 0.00025901 70.837 By MS/MS By MS/MS 1 1 12444000 6580300 5864100 192 399 209 484;485 444;445;446 445 766;767 3 AGELTEDEVER ADIDLTKRAGELTEDE LTEDEVERVITIMQNP R A G E R V 1 1 0 1 0 0 4 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1246.5677 P62269 P62269 56 66 RPS18 40S ribosomal protein S18 yes yes 2 0.0024894 98.048 By MS/MS By MS/MS 1 1 11026000 4679500 6346900 193 1795 210 486;487 447;448 448 2 AGEPDGESLDEQPSSSSSK DTSFLNSKAGEPDGES QPSSSSSKRSLLSRKF K A G S K R 1 0 0 2 0 1 3 2 0 0 1 1 0 0 2 6 0 0 0 0 0 0 19 0 1905.8076 Q9H3Q1;J3KRZ9 Q9H3Q1 57 75 CDC42EP4 Cdc42 effector protein 4 yes no 2 0.0027836 66.779 By MS/MS By matching 1 1 5511500 2696600 2814900 194 2654 211 488;489 449 449 5412 1 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR NDVTEGQRAGEPNSPD PAGVHPPR________ R A G P R - 5 1 2 3 1 0 3 3 1 0 0 0 0 0 6 2 1 0 0 2 0 0 30 0 3013.3108 Q08J23 Q08J23 738 767 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 3;4 1.4456E-16 92.613 By MS/MS By MS/MS 4 4 545980000 319340000 226640000 195 1869 212;213 490;491;492;493;494;495;496;497 450;451;452;453;454;455;456;457;458;459;460;461;462 453 3525;3526 13 AGEQQLSEPEDMEMEAGDTDDPPR QQQQQQQKAGEQQLSE GDTDDPPRITQNPVIN K A G P R I 2 1 0 4 0 2 5 2 0 0 1 0 2 0 3 1 1 0 0 0 0 0 24 0 2646.0698 H3BMF6;Q93009 H3BMF6 12 35 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes no 2;3 9.5965E-05 71.118 By MS/MS By MS/MS 2 2 53437000 28198000 25238000 196 1114 214 498;499;500;501 463;464;465;466;467;468 464 2041 6 AGFAGDDAPR DNGSGMCKAGFAGDDA FAGDDAPRAVFPSIVG K A G P R A 3 1 0 2 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 10 0 975.44101 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8;C9JTX5;C9JUM1;C9JZR7;Q6S8J3;A5A3E0;P0CG38;F8WCH0;P0CG39;P63267;P68133;P68032;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 19 28 ACTG1;ACTB;POTEE;POTEF;POTEI;ACTG2;POTEJ;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 2 0.0046427 86.67 By MS/MS By MS/MS 1 1 80840000 35371000 45469000 197 1785;1799 215 502;503 469;470 469 2 AGGAGFGTDGDDQEAINEAISVK DEPDVPERAGGAGFGT INEAISVKQEVTDMNY R A G V K Q 4 0 1 3 0 1 2 5 0 2 0 1 0 1 0 1 1 0 0 1 0 0 23 0 2221.0135 Q96EB6;B0QZ35;E9PC49 Q96EB6 712 734 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes no 2 0.0066745 59.983 By matching By MS/MS 1 1 9626500 5720300 3906100 198 2477 216 504;505 471 471 7000 1 AGGASPAASSTAQPPTQHR GGGGGPVRAGGASPAA AQPPTQHRLVARNGEA R A G H R L 5 1 0 0 0 2 0 2 1 0 0 0 0 0 3 3 2 0 0 0 0 0 19 0 1790.866 Q8IU81 Q8IU81 449 467 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 3 8.2443E-08 110.16 By matching By MS/MS 1 1 24389000 12262000 12127000 199 2260 217 506;507 472 472 4536 1 AGGGGGLGAGSPALSGGQGR PGAALQRRAGGGGGLG ALSGGQGRRRKQPPRP R A G G R R 3 1 0 0 0 1 0 10 0 0 2 0 0 0 1 2 0 0 0 0 0 0 20 0 1582.7812 Q6IQ22 Q6IQ22 11 30 RAB12 Ras-related protein Rab-12 yes yes 2 0.0010689 71.872 By MS/MS By MS/MS 1 1 25466000 12822000 12644000 200 2145 218 508;509 473;474;475 473 4263 3 AGGIETIANEFSDR SCYIAVARAGGIETIA IANEFSDRCTPSVISF R A G D R C 2 1 1 1 0 0 2 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 14 0 1478.7001 Q92598;R4GN69 Q92598 20 33 HSPH1 Heat shock protein 105 kDa yes no 2 0.0027056 84.507 By MS/MS By matching 1 1 2319200 1321400 997820 201 2426 219 510;511 476 476 1 AGGIETIANEYSDR SCYVAVARAGGIETIA IANEYSDRCTPACISF R A G D R C 2 1 1 1 0 0 2 2 0 2 0 0 0 0 0 1 1 0 1 0 0 0 14 0 1494.6951 A0A087WTS8;A0A087WYC1;P34932 A0A087WTS8 20 33 HSPA4 Heat shock 70 kDa protein 4 yes no 2 0.000137 113.67 By MS/MS By MS/MS 1 1 9471300 5824700 3646600 202 31 220 512;513 477;478 478 2 AGGPATPLSPTR MATPLPGRAGGPATPL ATPLSPTRLSRLQEKE R A G T R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 2 0 0 0 0 0 12 0 1123.5986 Q03252 Q03252 29 40 LMNB2 Lamin-B2 yes yes 2 2.8012E-09 144.51 By MS/MS By MS/MS 3 3 149160000 71312000 77849000 203 1847 221;222 514;515;516;517;518;519 479;480;481;482;483;484 480 3473;6768 5 AGGPATPLSPTRLSR MATPLPGRAGGPATPL LSPTRLSRLQEKEELR R A G S R L 2 2 0 0 0 0 0 2 0 0 2 0 0 0 3 2 2 0 0 0 0 0 15 1 1479.8158 Q03252 Q03252 29 43 LMNB2 Lamin-B2 yes yes 2 0.0027416 75.652 By MS/MS By matching 1 1 29368000 16623000 12745000 204 1847 223 520;521 485 485 3473;6768 1 AGGPTTPLSPTR VPPRMGSRAGGPTTPL TTPLSPTRLSRLQEKE R A G T R L 1 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 3 0 0 0 0 0 12 0 1153.6091 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 15 26 LMNB1 Lamin-B1 yes no 2 3.7581E-13 156.52 By MS/MS By MS/MS 3 3 344790000 182270000 162520000 205 1612 224;225 522;523;524;525;526;527 486;487;488;489;490;491 486 2972;6683 6 AGGPTTPLSPTRLSR VPPRMGSRAGGPTTPL LSPTRLSRLQEKEELR R A G S R L 1 2 0 0 0 0 0 2 0 0 2 0 0 0 3 2 3 0 0 0 0 0 15 1 1509.8263 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 15 29 LMNB1 Lamin-B1 yes no 3 0.0011766 71.558 By MS/MS By MS/MS 1 1 24110000 14972000 9137900 206 1612 226 528;529 492;493 492 2972;6683 2 AGGSAALSPSK GMAKKVTKAGGSAALS SAALSPSKKRKNSKKK K A G S K K 3 0 0 0 0 0 0 2 0 0 1 1 0 0 1 3 0 0 0 0 0 0 11 0 944.49271 Q92522 Q92522 24 34 H1FX Histone H1x yes yes 2 3.5191E-06 145 By MS/MS By MS/MS 1 1 108160000 56857000 51307000 207 2419 227 530;531 494;495;496;497;498;499;500 498 4862;4863 7 AGGSAALSPSKK GMAKKVTKAGGSAALS AALSPSKKRKNSKKKN K A G K K R 3 0 0 0 0 0 0 2 0 0 1 2 0 0 1 3 0 0 0 0 0 0 12 1 1072.5877 Q92522 Q92522 24 35 H1FX Histone H1x yes yes 2;3 2.8534E-10 152.11 By MS/MS By MS/MS 2 1 38544000 35553000 2991000 208 2419 228 532;533;534 501;502;503;504 502 4862;4863 4 AGGSAALSPSKKR GMAKKVTKAGGSAALS ALSPSKKRKNSKKKNQ K A G K R K 3 1 0 0 0 0 0 2 0 0 1 2 0 0 1 3 0 0 0 0 0 0 13 2 1228.6888 Q92522 Q92522 24 36 H1FX Histone H1x yes yes 2;3 0.00048113 117.52 By MS/MS By MS/MS 2 2 264820000 167900000 96922000 209 2419 229 535;536;537;538 505;506;507;508 506 4862;4863 4 AGIEIFVVVVGR KAVQEAQRAGIEIFVV IFVVVVGRQVNEPHIR R A G G R Q 1 1 0 0 0 0 1 2 0 2 0 0 0 1 0 0 0 0 0 4 0 0 12 0 1257.7445 A0A087X0S5;P12109 A0A087X0S5 963 974 COL6A1 Collagen alpha-1(VI) chain yes no 2 0.0058692 95.775 By MS/MS By MS/MS 2 2 0 0 0 210 133 230 539;540;541;542 509;510;511;512 509 4 AGIIASAR LTDSLVCKAGIIASAR AGIIASARAGETRFTD K A G A R A 3 1 0 0 0 0 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 8 0 757.44464 P13639 P13639 43 50 EEF2 Elongation factor 2 yes yes 2 0.018628 87.754 By MS/MS By MS/MS 1 1 3030500 1427700 1602800 211 1575 231 543;544 513;514 513 2 AGKEPAKPSPSR KAAKEQPKAGKEPAKP PAKPSPSRDRKETSI_ K A G S R D 2 1 0 0 0 0 1 1 0 0 0 2 0 0 3 2 0 0 0 0 0 0 12 2 1223.6622 Q15311 Q15311 637 648 RALBP1 RalA-binding protein 1 yes yes 3 0.011349 63.462 By MS/MS By matching 1 1 13907000 7193600 6713700 212 1982 232 545;546 515 515 3865 1 AGLASPEEEDAVGKEPLK LLLAHKKKAGLASPEE AVGKEPLKAAPKKRQL K A G L K A 3 0 0 1 0 0 4 2 0 0 2 2 0 0 2 1 0 0 0 1 0 0 18 1 1838.9262 Q9UNS1 Q9UNS1 1145 1162 TIMELESS Protein timeless homolog yes yes 2;3 0.0014935 73.279 By MS/MS By MS/MS 2 2 19236000 11111000 8124800 213 2863 233 547;548;549;550 516;517;518 518 5900 3 AGLASPEEEDAVGKEPLKAAPK LLLAHKKKAGLASPEE EPLKAAPKKRQLLDSD K A G P K K 5 0 0 1 0 0 4 2 0 0 2 3 0 0 3 1 0 0 0 1 0 0 22 2 2206.1481 Q9UNS1 Q9UNS1 1145 1166 TIMELESS Protein timeless homolog yes yes 3 0.0043391 55.337 By MS/MS By matching 1 1 11123000 6200400 4922900 214 2863 234 551;552 519 519 5900 1 AGLESGAEPGDGDSDTTK SKKDKKAKAGLESGAE DGDSDTTKKKKKKKKA K A G T K K 2 0 0 3 0 0 2 4 0 0 1 1 0 0 1 2 2 0 0 0 0 0 18 0 1705.7279 O60832 O60832 481 498 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 1.9855E-27 141.6 By MS/MS By MS/MS 2 2 158860000 80520000 78344000 215 1423 235 553;554;555;556 520;521;522;523 520 2618;2619;6626 4 AGLESGAEPGDGDSDTTKK SKKDKKAKAGLESGAE GDSDTTKKKKKKKKAK K A G K K K 2 0 0 3 0 0 2 4 0 0 1 2 0 0 1 2 2 0 0 0 0 0 19 1 1833.8228 O60832 O60832 481 499 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2;3 1.6223E-07 106.73 By MS/MS By MS/MS 2 2 92621000 43514000 49106000 216 1423 236 557;558;559;560 524;525;526 524 2618;2619;6626 3 AGLESGAEPGDGDSDTTKKK SKKDKKAKAGLESGAE DSDTTKKKKKKKKAKE K A G K K K 2 0 0 3 0 0 2 4 0 0 1 3 0 0 1 2 2 0 0 0 0 0 20 2 1961.9178 O60832 O60832 481 500 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 1.5758E-12 114.76 By MS/MS By MS/MS 1 1 34408000 18585000 15823000 217 1423 237 561;562 527;528 528 2618;2619;6626 2 AGLGSPERPPK GSPPSVQRAGLGSPER GSPERPPKTSPGSPRL R A G P K T 1 1 0 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 1 1107.6037 Q9H6F5;H0YG79 Q9H6F5 54 64 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 0.00045038 109.95 By MS/MS By MS/MS 2 2 143240000 82192000 61048000 218 2666 238 563;564;565;566 529;530;531;532;533;534;535;536 531 5435 8 AGLGSPERPPKTSPGSPR GSPPSVQRAGLGSPER KTSPGSPRLQQGAGLE R A G P R L 1 2 0 0 0 0 1 3 0 0 1 1 0 0 5 3 1 0 0 0 0 0 18 2 1789.9435 Q9H6F5;H0YG79 Q9H6F5 54 71 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 4.4672E-06 100.85 By MS/MS By MS/MS 4 4 212460000 115810000 96652000 219 2666 239;240;241 567;568;569;570;571;572;573;574 537;538;539;540;541 539 5435;5436;7052 5 AGLQFPVGR KAKTRSSRAGLQFPVG GLQFPVGRVHRLLRKG R A G G R V 1 1 0 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 9 0 943.52395 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;Q96QV6;P16104;Q8IUE6;C9J0D1;Q71UI9;P0C0S5 C9J0D1 22 30 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX;HIST2H2AB;H2AFV;H2AFZ Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX;Histone H2A type 2-B;Histone H2A;Histone H2A.V;Histone H2A.Z no no 2 4.3506E-10 117.16 By MS/MS By MS/MS 1 1 71260000 39062000 32198000 220 348;549 242 575;576 542;543 542 1 AGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGK VSKVSTNKAGLQTADK SGFGTTGKAPVGSVVS K A G G K A 6 0 2 3 0 3 0 8 0 1 3 2 0 2 0 2 3 0 1 0 0 0 36 1 3500.6808 P52594 P52594 319 354 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes yes 3 7.0267E-09 73.24 By MS/MS By matching 1 1 34975000 30668000 4306100 221 1753 243 577;578 544 544 7638 1 AGLSPAEPLLSR RLAGPGCKAGLSPAEP PAEPLLSRAGFSPDSS K A G S R A 2 1 0 0 0 0 1 1 0 0 3 0 0 0 2 2 0 0 0 0 0 0 12 0 1209.6717 B8ZZF3;O95402 B8ZZF3 366 377 MED26 Mediator of RNA polymerase II transcription subunit 26 yes no 2 0.0014043 96.756 By MS/MS By MS/MS 1 1 8888800 5338200 3550700 222 531 244 579;580 545;546 546 970 2 AGMSSNQSISSPVLDAVPR LSPDAVEKAGMSSNQS PVLDAVPRTPSRERSS K A G P R T 2 1 1 1 0 1 0 1 0 1 1 0 1 0 2 5 0 0 0 2 0 0 19 0 1914.9469 Q9UQ35 Q9UQ35 1394 1412 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0013551 71.697 By MS/MS By MS/MS 1 1 7597400 3661200 3936300 223 2877 245 581;582 547;548 548 5942 2 AGNWPGSPQVSGPSPAAR ________________ SGPSPAARMPGMSPAN R A G A R M 3 1 1 0 0 1 0 3 0 0 0 0 0 0 4 3 0 1 0 1 0 0 18 0 1734.8438 H7C3E5;O60244 H7C3E5 5 22 MED14 Mediator of RNA polymerase II transcription subunit 14 yes no 2 0.020237 50.222 By matching By MS/MS 1 1 9918800 4584600 5334200 224 1180 246 583;584 549 549 2140 1 AGPDLPSLPSHALEDEGWAAAAPSPGSAR PLARQEGKAGPDLPSL APSPGSARSMGSHTTR K A G A R S 7 1 0 2 0 0 2 3 1 0 3 0 0 0 5 4 0 1 0 0 0 0 29 0 2826.3573 Q9H3Q1 Q9H3Q1 269 297 CDC42EP4 Cdc42 effector protein 4 yes yes 3 0.0016453 51.963 By MS/MS By MS/MS 1 1 18237000 12760000 5477800 225 2654 247 585;586 550;551;552 551 5413 3 AGPEEPGDSPPLR ERLSDGGKAGPEEPGD PGDSPPLRHRPRGPPP K A G L R H 1 1 0 1 0 0 2 2 0 0 1 0 0 0 4 1 0 0 0 0 0 0 13 0 1320.631 A0A0A0MTG6;Q12770 A0A0A0MTG6 469 481 SCAP Sterol regulatory element-binding protein cleavage-activating protein yes no 2 2.1296E-11 146.36 By MS/MS 1 5188000 5188000 0 226 245 248 587 553;554 553 445 2 AGPTLTDENGDDLGLPPSPGDTSYYQDQVDDFHEAR KWAAVRAKAGPTLTDE VDDFHEARSRAALAKG K A G A R S 2 1 1 7 0 2 2 4 1 0 3 0 0 1 4 2 3 0 2 1 0 0 36 0 3891.6984 Q9NQZ2 Q9NQZ2 20 55 UTP3 Something about silencing protein 10 yes yes 4 0.0033081 42.571 By MS/MS 1 8636500 8636500 0 227 2715 249 588 555 555 5539 1 AGQKTANCR YSITAKNKAGQKTANC GQKTANCRVKVMDVPG K A G C R V 2 1 1 0 1 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 9 1 1004.4822 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42 A0A0A0MRA3 9592 9600 TTN Titin no no 1 NaN 0 0 0 228 173 0 AGSCCLSPGGR LVKEEGPRAGSCCLSP CCLSPGGRAELEGRDK R A G G R A 1 1 0 0 2 0 0 3 0 0 1 0 0 0 1 2 0 0 0 0 0 0 11 0 1120.4754 W0Z7M9;E7ER32;A0A087X287;Q969V6;B0QY83;A0A087WU73 W0Z7M9 540 550 mkl1;MKL1 MKL/myocardin-like protein 1 yes no 2 5.7613E-06 132.14 By MS/MS By MS/MS 1 1 10765000 5833300 4931600 229 3015 250 589;590 556;557 556 6211 2 AGSFTGTSDPEAAPAR ILAMPRKRAGSFTGTS DPEAAPARTSFSGRSV R A G A R T 4 1 0 1 0 0 1 2 0 0 0 0 0 1 2 2 2 0 0 0 0 0 16 0 1533.7059 J3KQR7;Q9Y4F5 J3KQR7 1178 1193 CEP170B Centrosomal protein of 170 kDa protein B yes no 2 0.00018189 98.676 By MS/MS By MS/MS 1 1 43503000 23686000 19818000 230 1235 251 591;592 558;559 558 2237 2 AGSGQDQCRKSR KSCQVSTRAGSGQDQC QDQCRKSRGRSASPKK R A G S R G 1 2 0 1 1 2 0 2 0 0 0 1 0 0 0 2 0 0 0 0 0 0 12 2 1348.6266 Q5TCQ9 Q5TCQ9 1297 1308 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 yes yes 3 0.0096931 62.799 By MS/MS 1 8379400 0 8379400 231 2109 252 593 560 560 1 AGSISTLDSLDFAR SGGGQLNRAGSISTLD LDSLDFARYSDDGNRE R A G A R Y 2 1 0 2 0 0 0 1 0 1 2 0 0 1 0 3 1 0 0 0 0 0 14 0 1451.7256 A0A075B785;Q9P260 A0A075B785 178 191 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 2 1.6777E-16 152.16 By MS/MS By MS/MS 1 1 14659000 8505600 6153200 232 14 253 594;595 561;562 561 31 2 AGSLGPETPSR AFLQRPSRAGSLGPET LGPETPSRVGMKVPTI R A G S R V 1 1 0 0 0 0 1 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 11 0 1070.5356 F8W9F9;H0Y7T5;Q9Y3S1;H0Y7J9;H0Y493;H0Y7R3 F8W9F9 1850 1860 WNK2 Serine/threonine-protein kinase WNK2 yes no 2 0.010524 69.216 By MS/MS By MS/MS 1 1 15031000 8197300 6833800 233 942 254 596;597 563;564 563 1708 2 AGSLKDPEIAELFFKEDPEK ________________ FFKEDPEKLFTDLREI R A G E K L 2 0 0 2 0 0 4 1 0 1 2 3 0 2 2 1 0 0 0 0 0 0 20 2 2262.142 Q7L7X3;J3QS76 Q7L7X3 7 26 TAOK1 Serine/threonine-protein kinase TAO1 yes no 3 0.011815 49.851 By MS/MS 1 4608800 0 4608800 234 2201 255 598 565 565 4383 1 AGSLPGCLR ELCSGGVKAGSLPGCL GSLPGCLRVSICDENT K A G L R V 1 1 0 0 1 0 0 2 0 0 2 0 0 0 1 1 0 0 0 0 0 0 9 0 929.47529 Q8NG08;F5H1I4 Q8NG08 54 62 HELB DNA helicase B yes no 2 0.01227 71.614 By MS/MS By matching 1 1 7768800 4247900 3520900 235 2357 256 599;600 566 566 4730 1 AGSLQLSSMSAGNSSLR PCEAGRVRAGSLQLSS SAGNSSLRRTKRKAPS R A G L R R 2 1 1 0 0 1 0 2 0 0 3 0 1 0 0 6 0 0 0 0 0 0 17 0 1664.8152 A0A0X1KG75;A0A0D9SG04;Q53SF7;A0A0B4J1Z0 A0A0X1KG75 382 398 COBLL1 Cordon-bleu protein-like 1 yes no 2 0.0026717 68.123 By matching By MS/MS 1 1 4816400 2916200 1900200 236 317 257 601;602 567 567 577 1 AGSLQLSSMSAGNSSLRRTK PCEAGRVRAGSLQLSS NSSLRRTKRKAPSPPS R A G T K R 2 2 1 0 0 1 0 2 0 0 3 1 1 0 0 6 1 0 0 0 0 0 20 2 2050.0589 A0A0X1KG75;A0A0D9SG04;Q53SF7;A0A0B4J1Z0 A0A0X1KG75 382 401 COBLL1 Cordon-bleu protein-like 1 yes no 3 0.027399 40.349 By MS/MS By matching 1 1 5721700 3465000 2256600 237 317 258 603;604 568 568 577 0 AGSNEDPILAPSGTPPPTIPPDETFGGR LPGPENHRAGSNEDPI PDETFGGRVPRPAFVH R A G G R V 2 1 1 2 0 0 2 4 0 2 1 0 0 1 7 2 3 0 0 0 0 0 28 0 2789.3508 E7EV54;C9JFV4;Q8IZL8 E7EV54 585 612 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 3 0.0014794 53.496 By MS/MS 1 5756500 0 5756500 238 590 259 605 569;570;571 571 1072 3 AGSPDVLR KQAENGERAGSPDVLR AGSPDVLRCSSQGHRK R A G L R C 1 1 0 1 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 8 0 813.43447 Q8NDX6 Q8NDX6 42 49 ZNF740 Zinc finger protein 740 yes yes 2 0.014811 79.489 By MS/MS 1 19529000 19529000 0 239 2347 260 606 572 572 4708 1 AGSPLCNSNLQDSEEDIEPSYSLFR EEVFNSPRAGSPLCNS EPSYSLFREDTSLPSL R A G F R E 1 1 2 2 1 1 3 1 0 1 3 0 0 1 2 5 0 0 1 0 0 0 25 0 2827.2607 Q9NRY4 Q9NRY4 973 997 ARHGAP35 Rho GTPase-activating protein 35 yes yes 3 0.00023703 63.412 By MS/MS 1 6673200 0 6673200 240 2725 261 607 573 573 5566 1 AGSRLSAEER KESIARARAGSRLSAE SRLSAEERQREEQLVS R A G E R Q 2 2 0 0 0 0 2 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 10 1 1074.5418 B1AJQ6;Q86Y82 B1AJQ6 137 146 STX12 Syntaxin-12 yes no 2 0.014067 70.563 By matching By MS/MS 1 2 55847000 21105000 34742000 241 453 262 608;609;610 574;575 574 883 2 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAK AASLSNQKAGSSAAGA SPVTSAAKGIPGFGNT K A G A K G 8 0 3 1 0 2 0 5 1 0 1 1 0 0 3 10 3 1 0 2 0 0 41 0 3811.7634 A0A0A0MSJ0;Q86XP3 A0A0A0MSJ0 602 642 DDX42 ATP-dependent RNA helicase DDX42 yes no 3 0.0019172 44.061 By MS/MS 1 41297000 0 41297000 242 217 263 611 576 576 392 1 AGSSGNSCITYQPSVSGEHK SGSSFSRRAGSSGNSC PSVSGEHKAQVTTKAE R A G H K A 1 0 1 0 1 1 1 3 1 1 0 1 0 0 1 5 1 0 1 1 0 0 20 0 2064.9171 A6PW57;Q99755 A6PW57 461 480 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha yes no 3 0.025468 57.41 By MS/MS 1 3031100 0 3031100 243 427 264 612 577 577 805;806 0 AGSSTPGDAPPAVAEVQGR AGSSEQPRAGSSTPGD AVAEVQGRSDGSGESA R A G G R S 4 1 0 1 0 1 1 3 0 0 0 0 0 0 3 2 1 0 0 2 0 0 19 0 1765.8595 Q7Z6Z7 Q7Z6Z7 2885 2903 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 3.9867E-06 93.226 By matching By MS/MS 1 1 21016000 10844000 10172000 244 2226 265 613;614 578 578 4456 1 AGTDSPVSCASVTEER SESENEPKAGTDSPVS CASVTEERVASDSPKP K A G E R V 2 1 0 1 1 0 2 1 0 0 0 0 0 0 1 3 2 0 0 2 0 0 16 0 1664.7312 E9PEI0;Q69YH5 E9PEI0 691 706 CDCA2 Cell division cycle-associated protein 2 yes no 2 0.000253 87.99 By MS/MS By matching 1 1 12622000 7117500 5504800 245 772 266 615;616 579 579 1396 1 AGTGVDNVDLEAATR EKLQVVGRAGTGVDNV VDLEAATRKGILVMNT R A G T R K 3 1 1 2 0 0 1 2 0 0 1 0 0 0 0 0 2 0 0 2 0 0 15 0 1487.7216 Q5SZU1;O43175 Q5SZU1 42 56 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.0035335 77.74 By MS/MS By matching 1 1 10536000 5681700 4854600 246 1373 267 617;618 580 580 0 AGVVNGTGAPGQSPGAGR QISVNNVKAGVVNGTG GQSPGAGRACESCYTT K A G G R A 3 1 1 0 0 1 0 6 0 0 0 0 0 0 2 1 1 0 0 2 0 0 18 0 1551.7754 H0Y4T7;E7ESY4;Q13330 H0Y4T7 166 183 MTA1 Metastasis-associated protein MTA1 yes no 2 1.1105E-05 88.565 By MS/MS By MS/MS 1 1 11846000 6167000 5679400 247 735 268 619;620 581;582 582 1314 2 AHFNAMFQPSSPTR HRMQLESRAHFNAMFQ FQPSSPTRRPGFSPTS R A H T R R 2 1 1 0 0 1 0 0 1 0 0 0 1 2 2 2 1 0 0 0 0 0 14 0 1589.7409 Q8WUA4;H0Y4Q6 Q8WUA4 883 896 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2;3 1.1855E-71 201.4 By MS/MS By MS/MS 4 4 103900000 55601000 48300000 248 2399 269;270 621;622;623;624;625;626;627;628 583;584;585;586;587;588;589;590 590 319 4793;4794;6976 8 AHGLSLIPSTGLCSPDLVNR QELEMQARAHGLSLIP CSPDLVNRIIKQEPVL R A H N R I 1 1 1 1 1 0 0 2 1 1 4 0 0 0 2 3 1 0 0 1 0 0 20 0 2106.0892 O75030 O75030 401 420 MITF Microphthalmia-associated transcription factor yes yes 3 0.0065517 51.566 By MS/MS By matching 1 1 3490600 1464400 2026200 249 1427 271 629;630 591 591 2628 1 AHLPLGQSNSCGSVLPPSLAAMAK MGRSITPKAHLPLGQS PSLAAMAKDSESRRML K A H A K D 4 0 1 0 1 1 0 2 1 0 4 1 1 0 3 4 0 0 0 1 0 0 24 0 2405.2195 E9PFQ4;Q86SQ0 E9PFQ4 882 905 PHLDB2 Pleckstrin homology-like domain family B member 2 yes no 3 0.0079037 47.757 By matching By MS/MS 1 1 9232200 5656400 3575900 250 784 272 631;632 592 592 1408 1 AHPPVTSAPLSPPQPNDLYK SLATSGVKAHPPVTSA PQPNDLYKNPTSSSEF K A H Y K N 2 0 1 1 0 1 0 0 1 0 2 1 0 0 6 2 1 0 1 1 0 0 20 0 2128.0953 Q4VCS5 Q4VCS5 190 209 AMOT Angiomotin yes yes 3 2.9643E-05 77.657 By MS/MS By MS/MS 1 1 14424000 7673000 6750700 251 2051 273 633;634 593;594 594 4018 2 AHPPVTSAPLSPPQPNDLYKNPTSSSEFYK SLATSGVKAHPPVTSA TSSSEFYKAQGPLPNQ K A H Y K A 2 0 2 1 0 1 1 0 1 0 2 2 0 1 7 5 2 0 2 1 0 0 30 1 3268.6041 Q4VCS5 Q4VCS5 190 219 AMOT Angiomotin yes yes 3;4 4.9436E-06 67.496 By MS/MS By MS/MS 2 2 95238000 57298000 37941000 252 2051 274 635;636;637;638 595;596;597;598;599 595 4018;7734 5 AHSEKDQPPFGDSDDSVEADKSSPGIHLER TKIRALVRAHSEKDQP SPGIHLERSQASTTVD R A H E R S 2 1 0 5 0 1 3 2 2 1 1 2 0 1 3 5 0 0 0 1 0 0 30 2 3249.481 Q14676 Q14676 483 512 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 4;5 0.00070558 59.189 By MS/MS By MS/MS 3 3 64998000 36103000 28895000 253 1951 275;276;277 639;640;641;642;643;644 600;601;602;603;604;605 603 3770;3771;3772;3773 5 AHSIQIMK MGARHRARAHSIQIMK AHSIQIMKVEEIAASK R A H M K V 1 0 0 0 0 1 0 0 1 2 0 1 1 0 0 1 0 0 0 0 0 0 8 0 926.50077 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 82 89 RPL18A 60S ribosomal protein L18a yes no 2 0.007168 97.813 By MS/MS By MS/MS 1 1 5636100 2781600 2854500 254 1314 278 645;646 606;607 606 2360 2 AHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR ALTPQHVRAHSSPASL TPTAQHLRQSSFEIPD R A H L R Q 6 1 0 0 0 2 0 4 2 0 4 0 0 0 5 5 5 0 0 3 0 0 37 0 3533.859 P46937 P46937 125 161 YAP1 Transcriptional coactivator YAP1 yes yes 3 0.0029305 46.01 By MS/MS By matching 1 1 32965000 21342000 11624000 255 1713 279 647;648 608 608 3192;3193;3194 1 AHTFSHPPSSTKR DSPQFRRRAHTFSHPP HPPSSTKRKLNLQDGR R A H K R K 1 1 0 0 0 0 0 0 2 0 0 1 0 1 2 3 2 0 0 0 0 0 13 1 1451.727 O60343;Q5JU47 O60343 640 652 TBC1D4 TBC1 domain family member 4 yes no 4 0.002834 72.958 By MS/MS By matching 1 1 1988600 1371200 617440 256 1407 280 649;650 609 609 2586;6620 1 AIAELGIYPAVDPLDSTSR DATTVLSRAIAELGIY DPLDSTSRIMDPNIVG R A I S R I 3 1 0 2 0 0 1 1 0 2 2 0 0 0 2 2 1 0 1 1 0 0 19 0 1987.0262 P06576;H0YH81 P06576 388 406 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 0.0027173 70.963 By MS/MS By MS/MS 1 1 12919000 7726500 5192700 257 1531 281 651;652 610;611 610 2 AIEPQKEEADENYNSVNTR REIRLQLKAIEPQKEE NYNSVNTRMR______ K A I T R M 2 1 3 1 0 1 4 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 19 1 2206.0138 C9JFM5;Q12846 C9JFM5 155 173 STX4 Syntaxin-4 yes no 3 0.00040484 73.688 By MS/MS By matching 2 1 32911000 17483000 15428000 258 589 282 653;654;655 612;613 612 1071;7320 2 AIGGIILTASHNPGGPNGDFGIK SCIIRKIKAIGGIILT PNGDFGIKFNISNGGP K A I I K F 2 0 2 1 0 0 0 6 1 4 1 1 0 1 2 1 1 0 0 0 0 0 23 0 2205.1542 P36871 P36871 108 130 PGM1 Phosphoglucomutase-1 yes yes 3 2.8749E-15 103.73 By MS/MS By MS/MS 2 2 47902000 25791000 22111000 259 1676 283;284 656;657;658;659 614;615;616;617 615 3088;6699 4 AIGHGRLLK QLRLAIKRAIGHGRLL IGHGRLLKDGPLYRLN R A I L K D 1 1 0 0 0 0 0 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 9 1 963.59778 Q92794;A5PLL3 Q92794 154 162 KAT6A;MYST3 Histone acetyltransferase KAT6A;Histone acetyltransferase yes no 1 0.02949 41.652 By MS/MS 1 11550000 11550000 0 260 2438 285 660 618 618 0 AIGNNSATSPR HHHPPKSRAIGNNSAT NNSATSPRVVVTQPNT R A I P R V 2 1 2 0 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 0 0 0 11 0 1086.5418 A0A1B0GV57;Q9NYJ8 A0A1B0GV57 158 168 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes no 2 2.9733E-41 199.19 By MS/MS By MS/MS 1 1 17023000 8794300 8229200 261 376 286 661;662 619;620 619 710;6319 2 AIGSSPLGSGEGLLGLSPGPNGHSHLLK LKQSHLSKAIGSSPLG NGHSHLLKTPLGGQKR K A I L K T 1 0 1 0 0 0 1 7 2 1 6 1 0 0 3 5 0 0 0 0 0 0 28 0 2651.4031 A0A087WZ13;E9PAU2;K7EQG2;Q8IY67 A0A087WZ13 664 691 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 3 0.0048065 48.389 By MS/MS By matching 1 1 6978400 4898400 2079900 262 104 287 663;664 621 621 194 1 AIGSTSKPQESPK SSASPVSRAIGSTSKP SKPQESPKGKRKLDLN R A I P K G 1 0 0 0 0 1 1 1 0 1 0 2 0 0 2 3 1 0 0 0 0 0 13 1 1328.6936 F5H8D7;P18887;M0QYS5 F5H8D7 200 212 XRCC1 DNA repair protein XRCC1 yes no 2 1.2722E-11 146.84 By MS/MS By MS/MS 1 2 34432000 12407000 22025000 263 898 288 665;666;667 622;623;624 622 1610 3 AIILEQSGKNQGYR VGMDTAAKAIILEQSG SGKNQGYRDADIRSFW K A I Y R D 1 1 1 0 0 2 1 2 0 2 1 1 0 0 0 1 0 0 1 0 0 0 14 1 1575.8369 A0A1B0GWH3;A6NFU8 A0A1B0GWH3 83 96 PGPEP1L Pyroglutamyl-peptidase 1-like protein yes no 2 0.013604 46.481 By matching By MS/MS 1 1 12516000 7573900 4942500 264 382 289 668;669 625 625 730;7257 1 AIIREGSLEGS SLARNLARAIIREGSL REGSLEGS________ R A I G S - 1 1 0 0 0 0 2 2 0 2 1 0 0 0 0 2 0 0 0 0 0 0 11 1 1130.5932 J3KS87;F5H0W7;J3QL54;J3KT10;Q9BW27 J3KS87 88 98 NUP85 Nuclear pore complex protein Nup85 yes no 2 0.014565 68.515 By matching By MS/MS 1 1 4693500 2360500 2333000 265 873 290 670;671 626 626 1569 1 AIKDTEAQKVSTQK SSCKLTIKAIKDTEAQ AQKVSTQKTSEITPQK K A I Q K T 2 0 0 1 0 2 1 0 0 1 0 3 0 0 0 1 2 0 0 1 0 0 14 2 1545.8362 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42 A0A0A0MRA3 26638 26651 TTN Titin yes no 3 0.02882 49.483 By MS/MS 1 2267200 2267200 0 266 173 291 672 627 627 0 AILGSYDSELTPAEYSPQLTR TKERDGMRAILGSYDS EYSPQLTRRMREAEDM R A I T R R 2 1 0 1 0 1 2 1 0 1 3 0 0 0 2 3 2 0 2 0 0 0 21 0 2310.138 Q9Y6D9;C9J9H5;C9JX80;C9JPS1 Q9Y6D9 413 433 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 2;3 3.5027E-08 89.604 By MS/MS By MS/MS 2 2 45905000 23827000 22078000 267 2946 292 673;674;675;676 628;629;630;631 628 6121;7962 4 AILVDLEPGTMDSVR TGGKYVPRAILVDLEP PGTMDSVRSGPFGQIF R A I V R S 1 1 0 2 0 0 1 1 0 1 2 0 1 0 1 1 1 0 0 2 0 0 15 0 1614.8287 Q5JP53;P07437;A0A0B4J269;Q13509;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q9BVA1;Q13885 Q5JP53 45 59 TUBB;TUBB3;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain no no 2 2.8757E-28 160.18 By MS/MS By MS/MS 2 2 37840000 22102000 15739000 268 1537;1935 293;294 677;678;679;680 632;633;634;635 634 185 4 AIPADSPTDQEPK GITNVDVKAIPADSPT SPTDQEPKTVMLSKQS K A I P K T 2 0 0 2 0 1 1 0 0 1 0 1 0 0 3 1 1 0 0 0 0 0 13 0 1367.6569 Q9Y5Y0;H7C3Z2 Q9Y5Y0 531 543 FLVCR1 Feline leukemia virus subgroup C receptor-related protein 1 yes no 2 0.0076267 82.831 By MS/MS By MS/MS 1 1 3223500 3223500 0 269 2941 295 681;682 636;637 636 6107 1 AIPGDQHPESPVHTEPMGIQGR GPCLSPPRAIPGDQHP EPMGIQGRGRQTVDKV R A I G R G 1 1 0 1 0 2 2 3 2 2 0 0 1 0 4 1 1 0 0 1 0 0 22 0 2352.1281 Q14676 Q14676 784 805 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.0027934 55.337 By MS/MS By MS/MS 1 1 41201000 22173000 19028000 270 1951 296 683;684 638;639 639 3774 2 AIPTVNHSGTFSPQAPVPTTVPVVDVR TWGRLVRRAIPTVNHS TVPVVDVRIPQLAPPA R A I V R I 2 1 1 1 0 1 0 1 1 1 0 0 0 1 5 2 4 0 0 6 0 0 27 0 2785.4763 Q16513;B1AL79 Q16513 524 550 PKN2 Serine/threonine-protein kinase N2 yes no 3 0.0020843 51.628 By MS/MS 1 10951000 0 10951000 271 2016 297 685 640 640 3932 1 AIPVSPSAVEEDEDEDGHTVVATAR NNISTVPKAIPVSPSA HTVVATARGIFNSNGG K A I A R G 4 1 0 3 0 0 4 1 1 1 0 0 0 0 2 2 2 0 0 4 0 0 25 0 2593.2144 A0A087X0K9;G5E9E7;G3V1L9;Q07157;H0Y3R8 A0A087X0K9 1521 1545 TJP1 Tight junction protein ZO-1 yes no 3 3.6139E-05 72.564 By MS/MS By MS/MS 1 1 38611000 23668000 14943000 272 129 298 686;687 641;642 641 228 2 AIRLELQGPRGSPNAR NKREIEGRAIRLELQG PRGSPNARSQPSKTLF R A I A R S 2 3 1 0 0 1 1 2 0 1 2 0 0 0 2 1 0 0 0 0 0 0 16 2 1733.9649 P19338;H7BY16 P19338 552 567 NCL Nucleolin yes no 3;4 0.00070973 68.277 By MS/MS By MS/MS 2 2 803060000 482450000 320610000 273 1604 299 688;689;690;691 643;644;645 645 2960 3 AISAPTSPTR AVKRMYDRAISAPTSP SAPTSPTRLSHSGKRS R A I T R L 2 1 0 0 0 0 0 0 0 1 0 0 0 0 2 2 2 0 0 0 0 0 10 0 999.53491 B0QY95;Q9NQG6 B0QY95 53 62 MIEF1 Mitochondrial dynamics protein MID51 yes no 2 2.2097E-05 132.03 By MS/MS By MS/MS 2 2 63395000 31897000 31499000 274 447 300;301 692;693;694;695 646;647;648;649 647 875;876;6341 4 AISETEENSDELSGER PSTSSRRRAISETEEN SDELSGERQRKRHKSD R A I E R Q 1 1 1 1 0 0 5 1 0 1 1 0 0 0 0 3 1 0 0 0 0 0 16 0 1764.765 E7EPE2;A7UKX8;A7UKY0;J3KN53;Q00987 E7EPE2 195 210 MDM2;mdm2 E3 ubiquitin-protein ligase Mdm2 yes no 2 2.5539E-06 115.56 By MS/MS By MS/MS 1 1 20616000 12932000 7684600 275 430 302 696;697 650;651;652 652 811 3 AISSANLLVR PRQKLSRKAISSANLL SSANLLVRSGSTESRG K A I V R S 2 1 1 0 0 0 0 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1042.6135 G3V1D0;B7WPE2;H0Y3M3;Q32P44 G3V1D0 146 155 EML3 Echinoderm microtubule-associated protein-like 3 yes no 2 0.0016218 100.88 By MS/MS By MS/MS 1 1 11291000 5602100 5688700 276 510 303 698;699 653;654 653 949 2 AISSDMFFGR RQKFAGAKAISSDMFF SSDMFFGREVDAEYEA K A I G R E 1 1 0 1 0 0 0 1 0 1 0 0 1 2 0 2 0 0 0 0 0 0 10 0 1129.5226 Q8N6H7;A0A0D9SF70;G5E9L0;H0YDN9;E9PMU9 Q8N6H7 430 439 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 2 7.7924E-05 118.28 By MS/MS By MS/MS 1 1 5725400 3448500 2276900 277 2321 304 700;701 655;656 655 4658 2 AISTGSLASSTLNK VRGFNMGRAISTGSLA LASSTLNKLAVRPLSV R A I N K L 2 0 1 0 0 0 0 1 0 1 2 1 0 0 0 4 2 0 0 0 0 0 14 0 1348.7198 Q12923 Q12923 906 919 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 4.796E-12 130.61 By MS/MS By MS/MS 2 2 40369000 19440000 20929000 278 1885 305;306 702;703;704;705 657;658;659 659 3588;3589;6783 3 AISTPETPLTK PSKGSQKRAISTPETP TPETPLTKRSVSTRSP R A I T K R 1 0 0 0 0 0 1 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 11 0 1156.634 E9PIQ6;Q14181 E9PIQ6 84 94 POLA2 DNA polymerase alpha subunit B yes no 2 0.014819 82.705 By MS/MS By MS/MS 2 2 18936000 10020000 8916200 279 804 307;308 706;707;708;709 660;661;662;663 661 1438;6444;6445 2 AISTPETPLTKR PSKGSQKRAISTPETP PETPLTKRSVSTRSPH R A I K R S 1 1 0 0 0 0 1 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 12 1 1312.7351 E9PIQ6;Q14181 E9PIQ6 84 95 POLA2 DNA polymerase alpha subunit B yes no 2;3 9.109E-29 134.61 By MS/MS By MS/MS 3 3 46197000 25345000 20852000 280 804 309;310 710;711;712;713;714;715 664;665;666;667;668 666 1438;6444;6445 4 AITGASLADIMAK RRAVKFQRAITGASLA SLADIMAKRNQKPEVR R A I A K R 4 0 0 1 0 0 0 1 0 2 1 1 1 0 0 1 1 0 0 0 0 0 13 0 1260.6748 C9JXB8;C9JNW5;P83731 C9JXB8 81 93 RPL24 60S ribosomal protein L24 yes no 2 0.00083466 106.54 By MS/MS By MS/MS 2 2 7912900 4310400 3602500 281 601 311;312 716;717;718;719 669;670;671;672 671 1093 4 AITIAGVPQSVTECVK MLPNSTERAITIAGVP QSVTECVKQICLVMLE R A I V K Q 2 0 0 0 1 1 1 1 0 2 0 1 0 0 1 1 2 0 0 3 0 0 16 0 1671.8866 Q15365 Q15365 145 160 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.0067378 66.326 By MS/MS By matching 1 1 3485600 2107100 1378500 282 1984 313 720;721 673 673 1 AITPPQQPYK PPDSPEPKAITPPQQP TPPQQPYKKRPKICCP K A I Y K K 1 0 0 0 0 2 0 0 0 1 0 1 0 0 3 0 1 0 1 0 0 0 10 0 1141.6132 J3QSD7;Q9NYV4 J3QSD7 689 698 CDK12 Cyclin-dependent kinase 12 yes no 2 0.022741 78.513 By MS/MS 1 0 0 0 283 1260 314 722 674 674 1 AITPPQQPYKK PPDSPEPKAITPPQQP PPQQPYKKRPKICCPR K A I K K R 1 0 0 0 0 2 0 0 0 1 0 2 0 0 3 0 1 0 1 0 0 0 11 1 1269.7081 J3QSD7;Q9NYV4 J3QSD7 689 699 CDK12 Cyclin-dependent kinase 12 yes no 3 0.016806 48.602 By MS/MS 1 0 0 0 284 1260 315 723 675 675 1 AITSLLGGGSPK ASTNARNKAITSLLGG LLGGGSPKNNTAAETE K A I P K N 1 0 0 0 0 0 0 3 0 1 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1099.6237 Q6KC79 Q6KC79 2649 2660 NIPBL Nipped-B-like protein yes yes 2 6.9261E-11 153.81 By MS/MS By MS/MS 1 1 94726000 54188000 40538000 285 2147 316 724;725 676;677 676 4266 2 AIVAIENPADVSVISSR EKLLLAARAIVAIENP DVSVISSRNTGQRAVL R A I S R N 3 1 1 1 0 0 1 0 0 3 0 0 0 0 1 3 0 0 0 3 0 0 17 0 1739.9418 C9J9K3;A0A0C4DG17;P08865;F8WD59 C9J9K3 64 80 RPSA 40S ribosomal protein SA yes no 2 0.00015386 98.105 By MS/MS By MS/MS 1 1 5318800 3184000 2134800 286 274 317 726;727 678;679 678 2 AIYSIVLK EDIGSETRAIYSIVLK AIYSIVLKLPGHSTIL R A I L K L 1 0 0 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 1 1 0 0 8 0 905.5586 P20309 P20309 363 370 CHRM3 Muscarinic acetylcholine receptor M3 yes yes 2 0.0054449 99.375 By MS/MS By MS/MS 1 1 878580 0 878580 287 1610 318 728;729 680;681 680 7573 2 AIYSSFKDDVDLK STATRVMKAIYSSFKD FKDDVDLKQDLRCDTI K A I L K Q 1 0 0 3 0 0 0 0 0 1 1 2 0 1 0 2 0 0 1 1 0 0 13 1 1499.7508 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 384 396 KIRREL Kin of IRRE-like protein 1 yes no 2 0.0047645 70.728 By MS/MS 1 2315600 2315600 0 288 484 319 730 682 682 7286 1 AKADSPVNGLPK RRLEGAKKAKADSPVN SPVNGLPKGRESRSRS K A K P K G 2 0 1 1 0 0 0 1 0 0 1 2 0 0 2 1 0 0 0 1 0 0 12 1 1195.6561 Q96S94;A0A0A0MSF3 Q96S94 365 376 CCNL2 Cyclin-L2 yes no 2 5.1804E-07 126.5 By MS/MS By MS/MS 1 1 8309000 4113700 4195300 289 2540 320 731;732 683;684 683 5120 2 AKAGPTLTDENGDDLGLPPSPGDTSYYQDQVDDFHEAR AAKWAAVRAKAGPTLT VDDFHEARSRAALAKG R A K A R S 3 1 1 7 0 2 2 4 1 0 3 1 0 1 4 2 3 0 2 1 0 0 38 1 4090.8304 Q9NQZ2 Q9NQZ2 18 55 UTP3 Something about silencing protein 10 yes yes 4 0.0037571 43.803 By matching By MS/MS 1 1 22815000 7615600 15200000 290 2715 321 733;734 685 685 5539 1 AKEVELVSE KKKKKKKKAKEVELVS KEVELVSE________ K A K S E - 1 0 0 0 0 0 3 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 1 1002.5233 O60832 O60832 506 514 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 2.7638E-95 229.82 By MS/MS By MS/MS 1 1 126550000 77277000 49271000 291 1423 322 735;736 686;687 686 2620 2 AKGLNPDGTPALSTLGGFSPASKPSSPR ALQEAKLKAKGLNPDG ASKPSSPREVKAEEKS K A K P R E 3 1 1 1 0 0 0 4 0 0 3 2 0 1 5 5 2 0 0 0 0 0 28 2 2709.4086 Q9UK58 Q9UK58 317 344 CCNL1 Cyclin-L1 yes yes 3 0.022269 44.674 By MS/MS By MS/MS 1 1 18773000 9780300 8992800 292 2825 323 737;738 688;689 688 5805;5806;5807;5808;5809;7089 2 AKGPSESSKER QQRKEKTRAKGPSESS PSESSKERNTPRKEDR R A K E R N 1 1 0 0 0 0 2 1 0 0 0 2 0 0 1 3 0 0 0 0 0 0 11 2 1174.5942 Q8TEA8;A0A087WZV9 Q8TEA8 175 185 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase yes no 3 0.011033 65.495 By MS/MS By matching 1 1 6800500 2973100 3827400 293 2385 324 739;740 690 690 4768 1 AKGPSPPGAK GSHRAGERAKGPSPPG GPSPPGAKRRRLSESS R A K A K R 2 0 0 0 0 0 0 2 0 0 0 2 0 0 3 1 0 0 0 0 0 0 10 1 908.50797 Q96S55 Q96S55 61 70 WRNIP1 ATPase WRNIP1 yes yes 2 0.002663 92.151 By MS/MS By MS/MS 1 1 23024000 11671000 11354000 294 2538 325 741;742 691;692;693;694 693 5116 4 AKGSETPGATPGSK RWDETPGRAKGSETPG PGATPGSKIWDPTPSH R A K S K I 2 0 0 0 0 0 1 3 0 0 0 2 0 0 2 2 2 0 0 0 0 0 14 1 1286.6466 O75533 O75533 239 252 SF3B1 Splicing factor 3B subunit 1 yes yes 2 8.1782E-07 125.39 By MS/MS By MS/MS 1 1 21434000 10743000 10692000 295 1443 326 743;744 695;696 695 6631 2 AKIDNYIPIF ECIAQRHRAKIDNYIP IDNYIPIF________ R A K I F - 1 0 1 1 0 0 0 0 0 3 0 1 0 1 1 0 0 0 1 0 0 0 10 1 1192.6492 J3QL14;R4GN72;F5GYQ1;P61421 J3QL14 223 232 ATP6V0D1 V-type proton ATPase subunit d 1 yes no 2 0.0014517 96.253 By MS/MS By MS/MS 1 1 5568000 3827700 1740400 296 864 327 745;746 697;698 698 7399 2 AKLNVEPDYLEVLEK RNEYLELKAKLNVEPD DYLEVLEKQTTFSQF_ K A K E K Q 1 0 1 1 0 0 3 0 0 0 3 2 0 0 1 0 0 0 1 2 0 0 15 1 1758.9404 O94991 O94991 937 951 SLITRK5 SLIT and NTRK-like protein 5 yes yes 3 0.0031447 62.377 By MS/MS 1 1893400 1893400 0 297 1471 328 747 699 699 7537 1 AKLSAPLAGMGNAK ASEDGRVRAKLSAPLA LAGMGNAKADSRGRSR R A K A K A 4 0 1 0 0 0 0 2 0 0 2 2 1 0 1 1 0 0 0 0 0 0 14 1 1327.7282 E3W994;J3KR49;O75122;E7ERI8;E7EW49;A0A0U1RQI6 E3W994 427 440 CLASP2 CLIP-associating protein 2 yes no 2 1.3873E-07 125.33 By MS/MS By MS/MS 2 2 40674000 22703000 17970000 298 690 329;330 748;749;750;751 700;701;702;703 700 78 1216 3 AKNSDLLTSPDVGLLK GSLKPHLRAKNSDLLT SPDVGLLKLASPELER R A K L K L 1 0 1 2 0 0 0 1 0 0 4 2 0 0 1 2 1 0 0 1 0 0 16 1 1669.9251 P05412 P05412 55 70 JUN Transcription factor AP-1 yes yes 2 0.0002458 101.36 By MS/MS By matching 1 1 9774100 5539400 4234700 299 1525 331 752;753 704;705 705 2810;6654 2 AKNSDLLTSPDVGLLKLASPELER GSLKPHLRAKNSDLLT LASPELERLIIQSSNG R A K E R L 2 1 1 2 0 0 2 1 0 0 6 2 0 0 2 3 1 0 0 1 0 0 24 2 2565.4014 P05412 P05412 55 78 JUN Transcription factor AP-1 yes yes 3 0.00093349 61.438 By MS/MS By MS/MS 1 1 36220000 22928000 13293000 300 1525 332 754;755 706;707 706 2810;2811;6654 2 AKNWEDEDFYDSDDDTFLDR EAVSRKRKAKNWEDED DDDTFLDRTGLIEKKR K A K D R T 1 1 1 7 0 0 2 0 0 0 1 1 0 2 0 1 1 1 1 0 0 0 20 1 2495.0037 A0A087WWF4;A0A087X0M4;Q9BWU0 A0A087WWF4 225 244 SLC4A1AP Kanadaptin yes no 2;3 0.00049642 71.969 By MS/MS By MS/MS 2 2 32881000 18627000 14254000 301 76 333 756;757;758;759 708;709;710 709 130;7162 3 AKPAMPQDSVPSPR DEVAPAKKAKPAMPQD QDSVPSPRSLQGKSTT K A K P R S 2 1 0 1 0 1 0 0 0 0 0 1 1 0 4 2 0 0 0 1 0 0 14 1 1479.7504 P53396 P53396 470 483 ACLY ATP-citrate synthase yes yes 2;3 4.6086E-17 153.68 By MS/MS By MS/MS 4 4 188100000 102410000 85695000 302 1761 334;335 760;761;762;763;764;765;766;767 711;712;713;714;715;716;717;718;719;720;721;722;723 722 221 3324 13 AKPPADPAAAASPCR DAAKGKVKAKPPADPA AAAASPCRAAAGGQGS K A K C R A 6 1 0 1 1 0 0 0 0 0 0 1 0 0 4 1 0 0 0 0 0 0 15 1 1478.73 Q9GZT9 Q9GZT9 114 128 EGLN1 Egl nine homolog 1 yes yes 2 0.00090456 84.403 By MS/MS By MS/MS 1 1 30630000 14281000 16349000 303 2624 336 768;769 724;725 725 5326 2 AKSEDSDVELSD EVHEELAKAKSEDSDV DSDVELSD________ K A K S D - 1 0 0 3 0 0 2 0 0 0 1 1 0 0 0 3 0 0 0 1 0 0 12 1 1293.5572 Q5VZL5;H7C1I7 Q5VZL5 1537 1548 ZMYM4 Zinc finger MYM-type protein 4 yes no 2 0.0043691 103.76 By MS/MS By MS/MS 1 1 17803000 7981800 9821100 304 2125 337 770;771 726;727 727 4225;4226 2 AKSLDGVTNDR KSQPNIPKAKSLDGVT LDGVTNDRTASQGQWG K A K D R T 1 1 1 2 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 11 1 1174.5942 E9PRL8;E9PQ71;E9PIP9;E9PJ54;E9PM00;Q9UBM7 E9PRL8 12 22 DHCR7 7-dehydrocholesterol reductase yes no 2 0.0045062 83.877 By MS/MS By MS/MS 1 1 45475000 20172000 25304000 305 803 338 772;773 728;729 729 1437 2 AKSLSAMDVEK STALTKPRAKSLSAMD LSAMDVEKCTKPCKDS R A K E K C 2 0 0 1 0 0 1 0 0 0 1 2 1 0 0 2 0 0 0 1 0 0 11 1 1177.6013 F8VY01;Q6ZV73 F8VY01 603 613 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 yes no 2 0.0066592 92.65 By MS/MS By MS/MS 1 1 0 0 0 306 926 339 774;775 730;731 730 1666 2 AKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK IEENKYSRAKSPQPPV YNCDLHFKISRDRLSA R A K F K I 1 0 1 5 2 1 4 0 2 0 2 2 0 2 3 1 2 0 1 3 0 0 32 1 3833.6825 Q00839;Q5RI18 Q00839 269 300 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 4 0.0010915 50.85 By MS/MS By matching 1 1 70685000 44020000 26665000 307 1827 340 776;777 732 732 3419 1 AKTPVTLK KREPLKGRAKTPVTLK AKTPVTLKQRRVEHNQ R A K L K Q 1 0 0 0 0 0 0 0 0 0 1 2 0 0 1 0 2 0 0 1 0 0 8 1 856.5382 G5E972;P42167;H0YJH7 G5E972 206 213 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2 0.023465 152.69 By MS/MS 1 117680000 0 117680000 308 990 341 778 733 733 6497 1 AKTPVTLKQR KREPLKGRAKTPVTLK TPVTLKQRRVEHNQVE R A K Q R R 1 1 0 0 0 1 0 0 0 0 1 2 0 0 1 0 2 0 0 1 0 0 10 2 1140.6979 G5E972;P42167;H0YJH7 G5E972 206 215 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3 0.0092495 92.781 By matching By MS/MS 1 1 35726000 16615000 19111000 309 990 342 779;780 734 734 6497 1 AKTQTPPVSPAPQPTEER RKLEEQARAKTQTPPV APQPTEERLPSSPVYE R A K E R L 2 1 0 0 0 2 2 0 0 0 0 1 0 0 5 1 3 0 0 1 0 0 18 1 1932.9905 Q14247;H0YEV2;H0YCD9 Q14247 397 414 CTTN Src substrate cortactin yes no 2;3 0.0076095 65.808 By MS/MS By MS/MS 2 2 42568000 20806000 21762000 310 1945 343 781;782;783;784 735;736 735 3752;6813;6814 2 AKTVDLDPGTLYVHSV NQPSRKSRAKTVDLDP GTLYVHSV________ R A K S V - 1 0 0 2 0 0 0 1 1 0 2 1 0 0 1 1 2 0 1 3 0 0 16 1 1713.8938 Q8WY07 Q8WY07 604 619 SLC7A3 Cationic amino acid transporter 3 yes yes 2 0.00014353 94.538 By MS/MS 1 19755000 19755000 0 311 2415 344 785 737 737 4845;7822 1 ALAAAGYDVEK VSLAALKKALAAAGYD AAGYDVEKNNSRIKLG K A L E K N 4 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1106.5608 P16402;P16403;Q02539;P22492;P10412 P10412 65 75 HIST1H1D;HIST1H1C;HIST1H1A;HIST1H1T;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.1;Histone H1t;Histone H1.4 no no 2 0.00012453 117.53 By MS/MS By MS/MS 1 1 61853000 28364000 33489000 312 1556;1586 345 786;787 738;739 739 2 ALAAAGYDVEKNNSR VSLAALKKALAAAGYD DVEKNNSRIKLGLKSL K A L S R I 4 1 2 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 15 1 1577.7798 P16402;P16403;Q02539;P22492;P10412 P10412 65 79 HIST1H1D;HIST1H1C;HIST1H1A;HIST1H1T;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.1;Histone H1t;Histone H1.4 no no 3 1.0202E-27 156.08 By MS/MS By MS/MS 1 1 44553000 27803000 16750000 313 1556;1586 346 788;789 740;741 741 2 ALAAVPSAGSVQRVPSGAAGGK QPLKLDYRALAAVPSA PSGAAGGKMAESPCSP R A L G K M 6 1 0 0 0 1 0 4 0 0 1 1 0 0 2 3 0 0 0 3 0 0 22 1 1950.0647 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1189 1210 SCRIB Protein scribble homolog yes no 2;3 0.01339 51.225 By MS/MS By MS/MS 2 2 20373000 10422000 9950400 314 322 347 790;791;792;793 742;743;744 744 592 3 ALAEEASEEELPSDVDLNDPYFAEEVK KRLKRKQKALAEEASE PYFAEEVKQIGINKKS K A L V K Q 4 0 1 3 0 0 7 0 0 0 3 1 0 1 2 2 0 0 1 2 0 0 27 0 3008.3662 Q9H501 Q9H501 651 677 ESF1 ESF1 homolog yes yes 3 1.8806E-27 117.99 By MS/MS By MS/MS 2 2 261850000 149740000 112110000 315 2664 348;349 794;795;796;797 745;746;747;748 745 5430;5431 4 ALAEEASEEELPSDVDLNDPYFAEEVKQIGINKK KRLKRKQKALAEEASE KQIGINKKSVKSAKDG K A L K K S 4 0 2 3 0 1 7 1 0 2 3 3 0 1 2 2 0 0 1 2 0 0 34 2 3789.8473 Q9H501 Q9H501 651 684 ESF1 ESF1 homolog yes yes 3 2.4212E-13 84.107 By MS/MS By matching 1 1 48809000 44420000 4388300 316 2664 350 798;799 749 749 5430;5431 1 ALANSLACQGK AQEEYVKRALANSLAC NSLACQGKYTPSGQAG R A L G K Y 3 0 1 0 1 1 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1131.5706 J3KPS3;P04075;H3BR68 J3KPS3 336 346 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 7.4215E-06 129.42 By MS/MS By MS/MS 1 1 9583800 5088500 4495300 317 1232 351 800;801 750;751 750 2 ALASNTSFFSGCSPIEEEAH APGKKKKRALASNTSF SPIEEEAH________ R A L A H - 3 0 1 0 1 0 3 1 1 1 1 0 0 2 1 4 1 0 0 0 0 0 20 0 2152.9371 O95239;Q2VIQ3 O95239 1213 1232 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2;3 3.1387E-49 157.07 By MS/MS By MS/MS 2 2 57401000 31633000 25768000 318 1480 352 802;803;804;805 752;753;754;755 753 2736;2737 4 ALCADEYR ELFLEKMRALCADEYR ALCADEYRARCRSYSI R A L Y R A 2 1 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 8 0 996.43348 O14654 O14654 330 337 IRS4 Insulin receptor substrate 4 yes yes 2 0.010096 75.213 By matching By MS/MS 1 1 5240800 2518000 2722800 319 1343 353 806;807 756 756 7501 1 ALCHTTSSPLPGDVK PPLLPNGKALCHTTSS SPLPGDVKVLSEKAIL K A L V K V 1 0 0 1 1 0 0 1 1 0 2 1 0 0 2 2 2 0 0 1 0 0 15 0 1581.7821 Q9H6S1 Q9H6S1 294 308 AZI2 5-azacytidine-induced protein 2 yes yes 2 0.001447 94.547 By matching By MS/MS 1 1 5576700 3105900 2470800 320 2670 354 808;809 757;758 758 7053 2 ALDIDSDEESEPK LYQNYKEKALDIDSDE SDEESEPKEQKSDEKI K A L P K E 1 0 0 3 0 0 3 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 13 0 1446.6362 Q96DR7 Q96DR7 387 399 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 0.0019018 89.26 By MS/MS By MS/MS 1 1 11839000 5326800 6511900 321 2474 355 810;811 759;760;761 759 4981;4982 3 ALDIDSDEESEPKEQK LYQNYKEKALDIDSDE ESEPKEQKSDEKIVIH K A L Q K S 1 0 0 3 0 1 4 0 0 1 1 2 0 0 1 2 0 0 0 0 0 0 16 1 1831.8323 Q96DR7 Q96DR7 387 402 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 8.9075E-21 144.18 By MS/MS By MS/MS 1 1 10903000 5000900 5902000 322 2474 356 812;813 762;763 763 4981;4982 2 ALDSNSLENDDLSAPGREPGHFNPESR HPSQTVRKALDSNSLE GHFNPESREDTRGGNE K A L S R E 2 2 3 3 0 0 3 2 1 0 3 0 0 1 3 4 0 0 0 0 0 0 27 1 2923.3333 Q32MZ4 Q32MZ4 763 789 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 3 0.011769 44.632 By MS/MS 1 4709000 0 4709000 323 2034 357 814 764 764 3972 1 ALDVSASDDEIAR AESFFQTKALDVSASD ASDDEIARLKKPDQAI K A L A R L 3 1 0 3 0 0 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1360.647 C9JLK2;H7C393;H7C1U0;C9JIF9;P13798 C9JLK2 80 92 APEH Acylamino-acid-releasing enzyme yes no 2 1.6521E-10 140.31 By MS/MS By MS/MS 1 1 10299000 6031400 4267100 324 593 358 815;816 765;766 765 1083 2 ALDYALQINVIEDKR ARAGYRGRALDYALQI INVIEDKRKFDIMEFV R A L K R K 2 1 1 2 0 1 1 0 0 2 2 1 0 0 0 0 0 0 1 1 0 0 15 1 1759.9468 I3L0K9;Q15027 I3L0K9 96 110 ACAP1 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 yes no 3 0.027704 41.092 By MS/MS 1 0 0 0 325 1195 359 817 767 767 7471 1 ALEEGDGSVSGSSPR ERKKAELRALEEGDGS SVSGSSPRSDISQPAS R A L P R S 1 1 0 1 0 0 2 3 0 0 1 0 0 0 1 4 0 0 0 1 0 0 15 0 1446.6587 Q8N3X1 Q8N3X1 420 434 FNBP4 Formin-binding protein 4 yes yes 2 1.462E-28 160.64 By MS/MS By MS/MS 1 1 27323000 14579000 12744000 326 2308 360 818;819 768;769 769 4635 2 ALEENNNFSK HEREVLQKALEENNNF EENNNFSKMAEEKLIL K A L S K M 1 0 3 0 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1164.5411 E5RGX5;Q93045 E5RGX5 109 118 STMN2 Stathmin;Stathmin-2 yes no 2 0.012079 87.639 By matching By MS/MS 1 1 7218100 3773900 3444200 327 696 361 820;821 770 770 1 ALEIIPR LLIGAYAKALEIIPRQ KALEIIPRQLCDNAGF K A L P R Q 1 1 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 7 0 810.49634 Q99832 Q99832 441 447 CCT7 T-complex protein 1 subunit eta yes yes 2 0.0096087 110.54 By MS/MS 1 961280 0 961280 328 2561 362 822 771 771 1 ALELDSNNEK AAIESCNKALELDSNN ELDSNNEKGLFRRGEA K A L E K G 1 0 2 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1131.5408 Q02790 Q02790 345 354 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 0.0033864 93.143 By MS/MS By MS/MS 1 1 6401900 2853500 3548400 329 1841 363 823;824 772;773 772 2 ALELTGLK ESAEDLEKALELTGLK ALELTGLKVFGNEIKL K A L L K V 1 0 0 0 0 0 1 1 0 0 3 1 0 0 0 0 1 0 0 0 0 0 8 0 843.50657 P19338 P19338 363 370 NCL Nucleolin yes yes 2 0.00020869 111.65 By MS/MS By MS/MS 1 1 1217000 1217000 0 330 1604 364 825;826 774;775 775 2 ALENDFFNSPPRKTVR RTGISNMRALENDFFN SPPRKTVRFGGTVTEV R A L V R F 1 2 2 1 0 0 1 0 0 0 1 1 0 2 2 1 1 0 0 1 0 0 16 2 1889.9748 F5H148;Q9NYV6;H3BMT1 F5H148 36 51 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 yes no 3 0.029735 47.621 By MS/MS 1 2286800 2286800 0 331 874 365 827 776 776 1 ALEQSQSLPLPAPTSTSPSRGNSR CREASQHRALEQSQSL SPSRGNSRNIKKLEER R A L S R N 2 2 1 0 0 2 1 1 0 0 3 0 0 0 4 6 2 0 0 0 0 0 24 1 2480.2619 H0Y7A3;H3BLT1;H7C2S1;H0Y4M6;H7BYP9;O15068 H0Y7A3 35 58 MCF2L Guanine nucleotide exchange factor DBS yes no 3 0.0013261 57.009 By MS/MS 1 3647900 3647900 0 332 1017 366 828 777 777 1882;1883;1884;6507;6508 1 ALESPERPFLAILGGAK KELNYFAKALESPERP LAILGGAKVADKIQLI K A L A K V 3 1 0 0 0 0 2 2 0 1 3 1 0 1 2 1 0 0 0 0 0 0 17 1 1767.9883 P00558 P00558 200 216 PGK1 Phosphoglycerate kinase 1 yes yes 2;3 5.6671E-22 141.07 By MS/MS By MS/MS 2 2 90379000 52451000 37928000 333 1513 367 829;830;831;832 778;779;780;781 780 2798 4 ALEVAEYLTPVLK VINTVKGKALEVAEYL EYLTPVLKESKFKETG K A L L K E 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 0 1 0 1 2 0 0 13 0 1444.8177 F8WDI0;Q9NT62 F8WDI0 12 24 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes no 2 2.1417E-50 195.51 By MS/MS By MS/MS 1 1 89799000 57342000 32457000 334 951 368 833;834 782;783 782 7418 2 ALEVAEYLTPVLKESK VINTVKGKALEVAEYL TPVLKESKFKETGVIT K A L S K F 2 0 0 0 0 0 3 0 0 0 3 2 0 0 1 1 1 0 1 2 0 0 16 1 1788.9873 F8WDI0;Q9NT62 F8WDI0 12 27 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes no 2;3 7.4944E-10 124.86 By MS/MS By MS/MS 2 2 34854000 20893000 13961000 335 951 369 835;836;837;838 784;785;786 786 7418 3 ALEYSNGIFDCQSPTSPFMGSLR DGIIAGSKALEYSNGI SPFMGSLRALHLVEDL K A L L R A 1 1 1 1 1 1 1 2 0 1 2 0 1 2 2 4 1 0 1 0 0 0 23 0 2576.1676 Q86W92;F5H6Q7;F5H0E0;F5H495;A0A0A0MTP2 Q86W92 25 47 PPFIBP1 Liprin-beta-1 yes no 3 0.0071779 46.353 By MS/MS By matching 1 1 8843000 4956200 3886700 336 2247 370 839;840 787 787 301 4495;4496;6942 1 ALFKPPEDSQDDESDSDAEEEQTTK EGSVDEAKALFKPPED AEEEQTTKRRRPTLGV K A L T K R 2 0 0 5 0 2 5 0 0 0 1 2 0 1 2 3 2 0 0 0 0 0 25 1 2810.189 H7C072;Q13769 H7C072 170 194 THOC5 THO complex subunit 5 homolog yes no 3 0.0090022 57.427 By MS/MS 1 0 0 0 337 1163 371 841 788 788 2111;2112 1 ALFLPGGALPSPR LSHGSKEKALFLPGGA GGALPSPRIPVLSREG K A L P R I 2 1 0 0 0 0 0 2 0 0 3 0 0 1 3 1 0 0 0 0 0 0 13 0 1294.7398 C9JS60;I3L417;C9JEY6;O95201 C9JS60 84 96 ZNF205 Zinc finger protein 205 yes no 2 0.014484 62.042 By MS/MS By matching 1 1 1170800 667250 503530 338 587 372 842;843 789 789 1067 1 ALGLSTDDAYEELR SLTDTVNKALGLSTDD DDAYEELRQKHEYELN K A L L R Q 2 1 0 2 0 0 2 1 0 0 3 0 0 0 0 1 1 0 1 0 0 0 14 0 1551.7417 Q9UK61;A0A087X0F1 Q9UK61 796 809 FAM208A Protein FAM208A yes no 2 0.00075995 86.463 By MS/MS By matching 1 1 3472000 1857000 1615100 339 2826 373 844;845 790 790 7933 1 ALGSPTKQLLPCEMACNEK RSVRLVERALGSPTKQ CEMACNEKLGKSVVAK R A L E K L 2 0 1 0 2 1 2 1 0 0 3 2 1 0 2 1 1 0 0 0 0 0 19 1 2146.0221 Q9NR45;Q5TBR0 Q9NR45 272 290 NANS Sialic acid synthase yes no 3 0.0035484 59.996 By MS/MS By MS/MS 1 1 7114100 4142600 2971600 340 2717 374 846;847 791;792 792 5549;7062 2 ALGSPTKQLLPCEMACNEKLGK RSVRLVERALGSPTKQ ACNEKLGKSVVAKVKI R A L G K S 2 0 1 0 2 1 2 2 0 0 4 3 1 0 2 1 1 0 0 0 0 0 22 2 2444.2226 Q9NR45 Q9NR45 272 293 NANS Sialic acid synthase yes yes 3 0.0002298 73.294 By MS/MS 1 9535100 9535100 0 341 2717 375 848 793;794 794 5549;7062 2 ALGSPTLK PVCPAAKRALGSPTLK ALGSPTLKVFGNHAKT R A L L K V 1 0 0 0 0 0 0 1 0 0 2 1 0 0 1 1 1 0 0 0 0 0 8 0 785.4647 Q8TC76 Q8TC76 92 99 FAM110B Protein FAM110B yes yes 2 0.020001 72.607 By matching By MS/MS 1 1 3924500 1996000 1928500 342 2376 376 849;850 795 795 4757 1 ALIAAQYSGAQVR PENWRAFKALIAAQYS QYSGAQVRVLSAPPHF K A L V R V 4 1 0 0 0 2 0 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 13 0 1346.7306 P26641 P26641 18 30 EEF1G Elongation factor 1-gamma yes yes 2 0.00036188 111.65 By MS/MS By MS/MS 1 1 3039800 1825800 1214000 343 1637 377 851;852 796;797 796 2 ALILVGLER NLRQEGVRALILVGLE LILVGLERVVNLERLM R A L E R V 1 1 0 0 0 0 1 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 9 0 982.61752 E7ENL6;P12111 E7ENL6 1369 1377 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0025382 107.9 By MS/MS By MS/MS 1 1 0 0 0 344 710 378 853;854 798;799 798 2 ALINSMDQNMFR PRLSFADRALINSMDQ SMDQNMFRNFSFMNPG R A L F R N 1 1 2 1 0 1 0 0 0 1 1 0 2 1 0 1 0 0 0 0 0 0 12 0 1438.6697 A0A087X0I9;Q04759 A0A087X0I9 645 656 PRKCQ Protein kinase C;Protein kinase C theta type yes no 2 0.0010734 101.53 By MS/MS By MS/MS 1 1 6476400 4043100 2433300 345 128 379 855;856 800;801 801 227 2 ALKQYNSTGDYR SFKNNYEKALKQYNST YNSTGDYRSHAVDKIQ K A L Y R S 1 1 1 1 0 1 0 1 0 0 1 1 0 0 0 1 1 0 2 0 0 0 12 1 1414.6841 A0A087WYV6;A0A087WZU5;O43657 A0A087WYV6 41 52 TSPAN6 Tetraspanin-6 yes no 2 0.019146 43.991 By MS/MS By matching 1 1 24766000 12925000 11841000 346 100 380 857;858 802 802 186;7167 1 ALLFIPR VEGQLEFRALLFIPRR RALLFIPRRAPFDLFE R A L P R R 1 1 0 0 0 0 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 7 0 828.52216 P08238 P08238 331 337 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.0088821 136.44 By MS/MS By MS/MS 1 1 2582400 1243900 1338400 347 1542 381 859;860 803;804 804 2 ALLFVPR VEGQLEFRALLFVPRR RALLFVPRRAPFDLFE R A L P R R 1 1 0 0 0 0 0 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 7 0 814.50651 P07900 P07900 339 345 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.00053911 112.27 By MS/MS By MS/MS 1 1 1631100 1631100 0 348 1540 382 861;862 805;806 806 2 ALLLLCGEDD DTSGDYKKALLLLCGE LLLCGEDD________ K A L D D - 1 0 0 2 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 10 0 1117.5325 D6RBE9;D6RBL5;P08758 D6RBE9 211 220 ANXA5 Annexin;Annexin A5 yes no 2 0.008675 97.602 By MS/MS By matching 1 1 3040800 1653400 1387400 349 659 383 863;864 807 807 1 ALLQSSASR EVQDAELKALLQSSAS LLQSSASRKTQKKKKK K A L S R K 2 1 0 0 0 1 0 0 0 0 2 0 0 0 0 3 0 0 0 0 0 0 9 0 931.50869 Q9UQ80 Q9UQ80 356 364 PA2G4 Proliferation-associated protein 2G4 yes yes 2 0.0038343 98.048 By MS/MS By matching 1 1 8724100 5089500 3634500 350 2878 384 865;866 808 808 6007 1 ALLSPFSTPVR YRIPQQRKALLSPFST SPFSTPVRSVSENSLV K A L V R S 1 1 0 0 0 0 0 0 0 0 2 0 0 1 2 2 1 0 0 1 0 0 11 0 1186.671 Q13322 Q13322 415 425 GRB10 Growth factor receptor-bound protein 10 yes yes 2 0.001884 93.345 By MS/MS By MS/MS 1 1 4229900 2225200 2004700 351 1910 385 867;868 809;810 810 3662 2 ALMGSPQLVAAVVR SKKEASRRALMGSPQL QLVAAVVRTMQNTSDL R A L V R T 3 1 0 0 0 1 0 1 0 0 2 0 1 0 1 1 0 0 0 3 0 0 14 0 1410.8017 C9JTX4;C9J826;C9JK18;C9JKY1;P14923 C9JTX4 178 191 JUP Junction plakoglobin yes no 2 0.004077 70.622 By MS/MS By matching 1 1 1840400 908100 932260 352 568 386 869;870 811 811 1047 1 ALPLPQSSTC NGGRKNERALPLPQSS PLPQSSTC________ R A L T C - 1 0 0 0 1 1 0 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 10 0 1072.5223 C9J5X1;P08069 C9J5X1 1357 1366 IGF1R Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain yes no 2 0.0070311 102.06 By MS/MS By matching 1 1 12431000 7478000 4953200 353 564 387 871;872 812 812 6368 1 ALPLSPR VTCSPRVKALPLSPRK KALPLSPRKRLGDDNL K A L P R K 1 1 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 7 0 752.45447 J3QR52;J3QLN7;Q99741;J3KTI7 J3QR52 50 56 CDC6 Cell division control protein 6 homolog yes no 2 0.025018 79.939 By MS/MS By MS/MS 1 1 14749000 8053900 6695100 354 1250 388 873;874 813;814 813 2263 2 ALPNNTSSSPQPK LPPGSTKRALPNNTSS TSSSPQPKKKPLDGEY R A L P K K 1 0 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 13 0 1339.6732 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 148 160 TP53 Cellular tumor antigen p53 yes no 2 1.9759E-15 156.52 By MS/MS By MS/MS 2 2 405530000 208130000 197410000 355 118 389;390 875;876;877;878 815;816;817;818;819;820 816 212;213 5 ALPPLPRPPTPK DGPRVLERALPPLPRP LPRPPTPKLEPKEESP R A L P K L 1 1 0 0 0 0 0 0 0 0 2 1 0 0 6 0 1 0 0 0 0 0 12 1 1282.7761 M0QZ09;Q8N6T7 M0QZ09 211 222 SIRT6 NAD-dependent protein deacetylase sirtuin-6 yes no 3 0.0013266 104.7 By MS/MS By MS/MS 2 2 2096400 1316400 780000 356 1306 391 879;880;881;882 821;822;823;824 824 6583 4 ALPSEDEEGQDDKDFYLR DLESAMSRALPSEDEE DDKDFYLRGAVGLSGD R A L L R G 1 1 0 4 0 1 3 1 0 0 2 1 0 1 1 1 0 0 1 0 0 0 18 1 2125.944 Q5JV20;F8WAI0;H0Y326;H0Y325;E7ENN3;A0A0C4DG40;Q8NF91 Q5JV20 457 474 SYNE1 Nesprin-1 yes no 3 0.00040993 74.338 By MS/MS By matching 1 1 9687100 5491500 4195600 357 280 392 883;884 825 825 500 1 ALPSLNTGSSSPR QTSCNPSRALPSLNTG NTGSSSPRGVEEPDVI R A L P R G 1 1 1 0 0 0 0 1 0 0 2 0 0 0 2 4 1 0 0 0 0 0 13 0 1285.6626 O14545 O14545 317 329 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 1.746E-10 134.4 By MS/MS By MS/MS 2 2 323080000 156050000 167020000 358 1340 393;394 885;886;887;888 826;827;828;829 827 2424;2425;2426;6590 4 ALPTSKPEGSLHSSPVGPSSSK PSDPRLARALPTSKPE PVGPSSSKGSGPPPTE R A L S K G 1 0 0 0 0 0 1 2 1 0 2 2 0 0 4 7 1 0 0 1 0 0 22 1 2149.1015 Q9UPT8;M0QY97 Q9UPT8 895 916 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 3 0.011003 47.155 By MS/MS By matching 1 1 16653000 8915700 7737000 359 2870 395 889;890 830 830 5921 1 ALQASALK ALTFSYGRALQASALK ALQASALKAWGGKKEN R A L L K A 3 0 0 0 0 1 0 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 0 800.4756 J3KPS3;P04075;H3BQN4;H3BR68 J3KPS3 309 316 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0089329 113.89 By MS/MS By MS/MS 1 1 3520600 1764900 1755600 360 1232 396 891;892 831;832 831 2 ALQHTESPSETNKPHSK PSSAKKPKALQHTESP ETNKPHSKSKKRHLDQ K A L S K S 1 0 1 0 0 1 2 0 2 0 1 2 0 0 2 3 2 0 0 0 0 0 17 1 1889.9232 Q14669;G5E9G6;C9JLJ5;C9JSX9;C9JLD7 Q14669 94 110 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 4 0.021523 46.368 By MS/MS By matching 1 1 28992000 15764000 13228000 361 1949 397 893;894 833 833 1 ALQLSNSPGASSAFLK SADCAKDKALQLSNSP GASSAFLKAETEHNKE K A L L K A 3 0 1 0 0 1 0 1 0 0 3 1 0 1 1 4 0 0 0 0 0 0 16 0 1589.8413 Q12802;H0YMW2 Q12802 977 992 AKAP13 A-kinase anchor protein 13 yes no 2 4.5113E-06 111.78 By MS/MS By MS/MS 1 1 5362200 3255600 2106600 362 1877 398 895;896 834;835 834 3556 2 ALRASESGI GTGHNQTRALRASESG LRASESGI________ R A L G I - 2 1 0 0 0 0 1 1 0 1 1 0 0 0 0 2 0 0 0 0 0 0 9 1 902.48214 P48960 P48960 827 835 CD97 CD97 antigen;CD97 antigen subunit alpha;CD97 antigen subunit beta yes yes 2 0.0031148 115.23 By MS/MS By MS/MS 1 1 14048000 7445600 6602100 363 1720 399 897;898 836;837 836 3219 2 ALSAAVADSLTNSPR MLRAMKQKALSAAVAD DSLTNSPRDSPAVSLS K A L P R D 4 1 1 1 0 0 0 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 15 0 1471.7631 H7C3B5;Q14687 H7C3B5 99 113 GSE1 Genetic suppressor element 1 yes no 2 6.4473E-05 110.32 By matching By MS/MS 1 1 7125900 4010700 3115200 364 1177 400 899;900 838 838 2135 1 ALSASHTDLAH NNCLADSRALSASHTD ASHTDLAH________ R A L A H - 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1121.5465 H0YG16;H0YJK1 H0YG16 258 268 KLC1 yes no 2;3 3.0275E-14 167.12 By MS/MS By MS/MS 2 2 213560000 110210000 103340000 365 1071 401 901;902;903;904 839;840;841;842 839 1977;1978 4 ALSDHHIYLEGTLLKPNMVTPGHACTQK KVLAAVYKALSDHHIY PGHACTQKFSHEEIAM K A L Q K F 2 0 1 1 1 1 1 2 3 1 4 2 1 0 2 1 3 0 1 1 0 0 28 1 3130.5692 J3KPS3;P04075;H3BQN4;H3BU78 J3KPS3 220 247 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 5 1.9949E-06 80.477 By MS/MS By matching 1 1 16240000 11274000 4966000 366 1232 402 905;906 843 843 1 ALSDPTTPL LSRQSHARALSDPTTP LSDPTTPL________ R A L P L - 1 0 0 1 0 0 0 0 0 0 2 0 0 0 2 1 2 0 0 0 0 0 9 0 913.47566 Q8TER5 Q8TER5 1511 1519 ARHGEF40 Rho guanine nucleotide exchange factor 40 yes yes 1 0.0011181 95.502 By MS/MS By MS/MS 1 1 5821700 3112000 2709700 367 2391 403 907;908 844;845 844 4779 2 ALSDREEEEEDDEEEEEEVEAAAQR AARSEDGRALSDREEE EVEAAAQRRLAKQISP R A L Q R R 4 2 0 3 0 1 12 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 25 1 2935.1963 Q8N3E9 Q8N3E9 494 518 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 yes yes 3 3.269E-10 90.884 By MS/MS By MS/MS 1 1 28680000 15435000 13245000 368 2304 404 909;910 846;847 847 4627 2 ALSGGGSVASPPPSPAMPK NFGPEWLRALSGGGSV PPSPAMPKYKLADYRY R A L P K Y 3 0 0 0 0 0 0 3 0 0 1 1 1 0 5 4 0 0 0 1 0 0 19 0 1706.8662 O75420 O75420 15 33 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 2 0.0017596 70.089 By MS/MS By MS/MS 2 2 11163000 5454500 5708200 369 1439 405;406 911;912;913;914 848;849;850 850 2649;2650;2651;2652 3 ALSGVLEQDRVQSLK KNKFDVQKALSGVLEQ QDRVQSLKDKNEATVS K A L L K D 1 1 0 1 0 2 1 1 0 0 3 1 0 0 0 2 0 0 0 2 0 0 15 1 1641.905 E9PN23;Q9Y450;G5E991;E9PMN1;E9PLR4;E9PJ90 E9PN23 93 107 HBS1L HBS1-like protein yes no 2;3 0.0023573 77.726 By MS/MS By MS/MS 2 2 10901000 6261000 4639600 370 830 407 915;916;917;918 851;852;853 853 1495 3 ALSIESLSPTDSSNGVNWR HKPGTFPKALSIESLS SSNGVNWRTGSISLGR K A L W R T 1 1 2 1 0 0 1 1 0 1 2 0 0 0 1 5 1 1 0 1 0 0 19 0 2031.9861 H3BRG5;Q9Y3M8 H3BRG5 394 412 STARD13 StAR-related lipid transfer protein 13 yes no 2 0.0063713 59.513 By matching By MS/MS 1 1 5356100 2722900 2633200 371 1137 408 919;920 854 854 2073 1 ALSKPGTAAELR AETRKFTRALSKPGTA PGTAAELRQSVSEVVR R A L L R Q 3 1 0 0 0 0 1 1 0 0 2 1 0 0 1 1 1 0 0 0 0 0 12 1 1212.6826 A0A0D9SF41;A0A0A0MT38;Q9BZ29 A0A0D9SF41 19 30 DOCK9 Dedicator of cytokinesis protein 9 yes no 3 0.0018299 79.036 By MS/MS By MS/MS 1 1 7914900 3757200 4157600 372 236 409 921;922 855;856 856 425 2 ALSLDDKGWR PARPRLERALSLDDKG SLDDKGWRRRRFRGSQ R A L W R R 1 1 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 1 0 0 0 0 10 1 1159.5986 Q9NRR6 Q9NRR6 83 92 INPP5E 72 kDa inositol polyphosphate 5-phosphatase yes yes 2 0.0032401 88.155 By MS/MS By MS/MS 1 1 9366500 4842700 4523800 373 2723 410 923;924 857;858;859 859 5564 3 ALSLGTIPSLTR SLPGRLSRALSLGTIP GTIPSLTRADYFSLLS R A L T R A 1 1 0 0 0 0 0 1 0 1 3 0 0 0 1 2 2 0 0 0 0 0 12 0 1227.7187 H0Y4R5;Q5SNT2;H0Y994 H0Y4R5 362 373 TMEM201 Transmembrane protein 201 yes no 2 0.0001117 115.37 By MS/MS By MS/MS 1 1 13091000 7930700 5160500 374 1019 411 925;926 860;861 860 1886 2 ALSMTHGSVK HPRAAYGRALSMTHGS SMTHGSVKSPISNGTF R A L V K S 1 0 0 0 0 0 0 1 1 0 1 1 1 0 0 2 1 0 0 1 0 0 10 0 1029.5277 Q08357 Q08357 314 323 SLC20A2 Sodium-dependent phosphate transporter 2 yes yes 2 0.011476 69.721 By matching By MS/MS 1 1 5098100 3275500 1822700 375 1864 412 927;928 862 862 3508 1 ALSPGLEESGLGLLAR YRLGARERALSPGLEE SGLGLLARFAASALPS R A L A R F 2 1 0 0 0 0 2 3 0 0 5 0 0 0 1 2 0 0 0 0 0 0 16 0 1581.8726 H9KVB4;O15417 H9KVB4 1855 1870 TNRC18 Trinucleotide repeat-containing gene 18 protein yes no 2 1.2777E-44 173.71 By MS/MS By MS/MS 1 1 38882000 21701000 17181000 376 1192 413 929;930 863;864 863 2160 2 ALSPLSPVAIEQTSLK IHNGKKSRALSPLSPV AIEQTSLKMMQAVGGA R A L L K M 2 0 0 0 0 1 1 0 0 1 3 1 0 0 2 3 1 0 0 1 0 0 16 0 1652.9349 J3KTI4;H7BYU6;Q96K83 J3KTI4 383 398 ZNF521 Zinc finger protein 521 yes no 2 0.00012172 94.281 By MS/MS By MS/MS 1 1 23144000 11978000 11167000 377 1154 414 931;932 865;866 865 2098;2099 2 ALSPVIPLIPR GRWEQEDRALSPVIPL PVIPLIPRASIPVFPD R A L P R A 1 1 0 0 0 0 0 0 0 2 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1174.7438 O14686 O14686 4736 4746 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 4.3492E-06 129 By MS/MS By MS/MS 1 1 54687000 26689000 27998000 378 1344 415 933;934 867;868 867 2445 2 ALSPVTSR RPSSATNKALSPVTSR ALSPVTSRTPGVVASA K A L S R T 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 8 0 829.46577 Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91 734 741 EP400 E1A-binding protein p400 yes no 2 0.013435 81.972 By MS/MS By matching 1 1 17142000 8639400 8502200 379 2514 416 935;936 869 869 5076 1 ALSSAVQASPTSPGGSPSSPSSGQR SMGLEQNKALSSAVQA SSPSSGQRSASPSVPG K A L Q R S 3 1 0 0 0 2 0 3 0 0 1 0 0 0 4 9 1 0 0 1 0 0 25 0 2299.104 Q03164 Q03164 3500 3524 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 0.00097031 56.48 By MS/MS 1 18334000 18334000 0 380 1846 417 937 870 870 3465;3466;3467 1 ALSSGGSITSPPLSPALPK NFGPEWLRALSSGGSI PLSPALPKYKLADYRY R A L P K Y 2 0 0 0 0 0 0 2 0 1 3 1 0 0 4 5 1 0 0 0 0 0 19 0 1778.9778 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2 I1E4Y6 17 35 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 1.3775E-97 201.22 By MS/MS By MS/MS 4 4 206760000 94180000 112580000 381 1194 418;419;420 938;939;940;941;942;943;944;945 871;872;873;874;875;876;877;878 877 2164;2165;2166;2167;2168;6554 8 ALSSGGSITSPPLSPALPKYK NFGPEWLRALSSGGSI SPALPKYKLADYRYGR R A L Y K L 2 0 0 0 0 0 0 2 0 1 3 2 0 0 4 5 1 0 1 0 0 0 21 1 2070.1361 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2 I1E4Y6 17 37 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2;3 3.3326E-19 127.35 By MS/MS By MS/MS 4 4 69676000 44755000 24921000 382 1194 421;422 946;947;948;949;950;951;952;953 879;880;881;882;883;884;885 885 2164;2165;2166;2167;2168;6554 7 ALSSLHGDDQDSEDEVLTIPEVK HITTKSVKALSSLHGD VLTIPEVKVHSGRGAG K A L V K V 1 0 0 4 0 1 3 1 1 1 3 1 0 0 1 3 1 0 0 2 0 0 23 0 2496.1868 P11717 P11717 2398 2420 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2;3 2.9566E-09 86.701 By MS/MS By MS/MS 2 2 371120000 171470000 199650000 383 1567 423 954;955;956;957 886;887;888;889;890 887 2881 5 ALSSLTSFQTHVRLHSGER YECKQCGKALSSLTSF VRLHSGERPYECKICG K A L E R P 1 2 0 0 0 1 1 1 2 0 3 0 0 1 0 4 2 0 0 1 0 0 19 1 2125.1028 Q8IYI8 Q8IYI8 320 338 ZNF440 Zinc finger protein 440 yes yes 3 0.014724 40.669 By MS/MS 1 6572900 0 6572900 384 2290 424 958 891 891 4594;4595 1 ALTDDSDENEEEDAFTDQKIR MKLPPPYKALTDDSDE AFTDQKIRQRYADLPG K A L I R Q 2 1 1 5 0 1 4 0 0 1 1 1 0 1 0 1 2 0 0 0 0 0 21 1 2440.0514 Q8NI35;A0A0U1RRD7;A0A0U1RQW4 Q8NI35 1207 1227 INADL InaD-like protein yes no 3 2.1637E-05 77.554 By MS/MS By MS/MS 1 1 16197000 8705800 7490700 385 2365 425 959;960 892;893 892 4741 2 ALTSELANAR ERVQKHLKALTSELAN TSELANARDESKKTAN K A L A R D 3 1 1 0 0 0 1 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 10 0 1044.5564 P26038 P26038 524 533 MSN Moesin yes yes 2 0.0041903 106.29 By MS/MS 1 0 0 0 386 1633 426 961 894 894 3019 1 ALTVPELTQQMFDSK SRGSQQYRALTVPELT TQQMFDSKNMMAACDP R A L S K N 1 0 0 1 0 2 1 0 0 0 2 1 1 1 1 1 2 0 0 1 0 0 15 0 1706.8549 Q9BVA1;Q13885 Q9BVA1 283 297 TUBB2B;TUBB2A Tubulin beta-2B chain;Tubulin beta-2A chain yes no 3 0.028948 41.644 By MS/MS 1 0 0 0 387 1935 427 962 895 895 1 ALTVPELTQQVFDAK SRGSQQYRALTVPELT TQQVFDAKNMMAACDP R A L A K N 2 0 0 1 0 2 1 0 0 0 2 1 0 1 1 0 2 0 0 2 0 0 15 0 1658.8879 Q5JP53;P07437;Q5ST81 Q5JP53 265 279 TUBB Tubulin beta chain yes no 2 0.016148 61.213 By MS/MS By matching 1 1 9400300 4737000 4663300 388 1537 428 963;964 896 896 1 ALVEFESNPEETREPGSPPSVQR TSVSRTRRALVEFESN GSPPSVQRAGLGSPER R A L Q R A 1 2 1 0 0 1 5 1 0 0 1 0 0 1 4 3 1 0 0 2 0 0 23 1 2554.23 Q9H6F5;H0YG79 Q9H6F5 31 53 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 1.6197E-13 99.011 By MS/MS By MS/MS 1 1 417870000 232800000 185080000 389 2666 429 965;966 897;898;899;900 898 5437 4 ALVLDCHYPEDEVGQEDEAESDIFSIR IKNDDGKKALVLDCHY ESDIFSIREVSFQSTG K A L I R E 2 1 0 4 1 1 5 1 1 2 2 0 0 1 1 2 0 0 1 2 0 0 27 0 3135.3979 I3L3Q7;I3L3B0;Q07021 I3L3Q7 77 103 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 3 5.8223E-06 73.761 By MS/MS 1 11104000 11104000 0 390 1211 430 967 901 901 2196 1 ALVLIAFAQYLQQCPFEDHVK DLGEENFKALVLIAFA CPFEDHVKLVNEVTEF K A L V K L 3 0 0 1 1 3 1 0 1 1 3 1 0 2 1 0 0 0 1 2 0 0 21 0 2489.2777 CON__P02768-1;P02768;A0A0C4DGB6;A0A087WWT3;H7C013 CON__P02768-1 45 65 ALB Serum albumin yes no 3 1.7469E-14 119.76 By MS/MS By MS/MS 1 1 9984300 4451200 5533100 + 391 633 431 968;969 902;903 903 2 ALVVPEPEPDSDSNQER GDLLTERKALVVPEPE DSDSNQERKDD_____ K A L E R K 1 1 1 2 0 1 3 0 0 0 1 0 0 0 3 2 0 0 0 2 0 0 17 0 1880.8752 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 126 142 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 2 4.9008E-08 119.39 By MS/MS By MS/MS 2 2 108710000 55915000 52795000 392 547 432;433 970;971;972;973 904;905;906 904 998;999 3 ALYDYAGQEADELSFR AATGVRVRALYDYAGQ EADELSFRAGEELLKM R A L F R A 3 1 0 2 0 1 2 1 0 0 2 0 0 1 0 1 0 0 2 0 0 0 16 0 1846.8374 Q9UKS6;A0A0C4DGG1 Q9UKS6 370 385 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 2 6.7045E-24 150.69 By MS/MS By MS/MS 1 1 9738800 5433700 4305000 393 2835 434 974;975 907;908 907 7936 2 ALYSTAMESIQGEAR TRRPAPQKALYSTAME ESIQGEARRGGTMETD K A L A R R 3 1 0 0 0 1 2 1 0 1 1 0 1 0 0 2 1 0 1 0 0 0 15 0 1625.7719 A6PW57;Q99755;A2A3N6 A6PW57 346 360 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 2;3 1.5665E-217 255.52 By MS/MS By MS/MS 2 2 9210800 1958500 7252300 394 427 435;436 976;977;978;979 909;910;911;912 910 45 807;6329;7263 4 AMGIMNSFVNDIFER PDTGISSKAMGIMNSF FVNDIFERIAGEASRL K A M E R I 1 1 2 1 0 0 1 1 0 2 0 0 2 2 0 1 0 0 0 1 0 0 15 0 1742.812 Q16778;P33778;P23527;P06899;Q8N257;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814 Q16778 59 73 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K yes no 2 1.3911E-05 110.66 By MS/MS By MS/MS 2 3 14839000 9121800 5717100 395 1534 437;438 980;981;982;983;984 913;914;915;916 913 183;184 4 AMLDQLMGTSR MSAQAQMRAMLDQLMG DQLMGTSRDGDTTRQR R A M S R D 1 1 0 1 0 1 0 1 0 0 2 0 2 0 0 1 1 0 0 0 0 0 11 0 1221.5846 Q9Y383;V9GZ75;F8WEU3 Q9Y383 9 19 LUC7L2;C7orf55-LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 2 0.00083044 111.79 By MS/MS By matching 1 1 3378300 2015100 1363100 396 2902 439 985;986 917 917 6045;7126 1 AMLDQLMGTSRDGDTTR MSAQAQMRAMLDQLMG SRDGDTTRQRIKFSDD R A M T R Q 1 2 0 3 0 1 0 2 0 0 2 0 2 0 0 1 3 0 0 0 0 0 17 1 1866.8564 Q9Y383 Q9Y383 9 25 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes yes 3 0.00083886 72.898 By MS/MS By MS/MS 1 1 24009000 13153000 10856000 397 2902 440 987;988 918;919 918 6045;7126 2 AMLDSGIYPPGSPGK AKETARRRAMLDSGIY YPPGSPGK________ R A M G K - 1 0 0 1 0 0 0 3 0 1 1 1 1 0 3 2 0 0 1 0 0 0 15 0 1488.7283 O95295 O95295 122 136 SNAPIN SNARE-associated protein Snapin yes yes 2 0.00034103 97.223 By MS/MS By MS/MS 3 3 22930000 11056000 11874000 398 1484 441;442 989;990;991;992;993;994 920;921;922;923;924 924 177 2748 5 AMLLQGTESLNR MNRLQSQRAMLLQGTE QGTESLNRATQSIERS R A M N R A 1 1 1 0 0 1 1 1 0 0 3 0 1 0 0 1 1 0 0 0 0 0 12 0 1331.6867 H0YJL5;H0YJJ5;Q9UEU0 H0YJL5 47 58 VTI1B Vesicle transport through interaction with t-SNAREs homolog 1B yes no 2 0.0012481 99.011 By MS/MS By MS/MS 1 1 4865800 2946700 1919100 399 1081 443 995;996 925;926 925 1998;6531 2 AMSEVTSLHEDDWR PPSGRVERAMSEVTSL SLHEDDWRSRPSRGPA R A M W R S 1 1 0 2 0 0 2 0 1 0 1 0 1 0 0 2 1 1 0 1 0 0 14 0 1674.7308 S4R3V8;Q86X29 S4R3V8 382 395 LSR Lipolysis-stimulated lipoprotein receptor yes no 2;3 0.00081132 98.253 By MS/MS By MS/MS 3 3 33707000 17603000 16104000 400 2250 444;445 997;998;999;1000;1001;1002 927;928;929;930;931 929 4511;4512 5 AMSLNTLNVDAPR AGAAGMKRAMSLNTLN TLNVDAPRAPGTQFPS R A M P R A 2 1 2 1 0 0 0 0 0 0 2 0 1 0 1 1 1 0 0 1 0 0 13 0 1400.7082 Q6P597 Q6P597 464 476 KLC3 Kinesin light chain 3 yes yes 2 2.4799E-50 196.97 By MS/MS By MS/MS 2 2 41359000 23258000 18101000 401 2156 446;447 1003;1004;1005;1006 932;933;934 933 291 4294 3 AMSTSQSPTR VPQESQERAMSTSQSP STSQSPTRSQKGSSGD R A M T R S 1 1 0 0 0 1 0 0 0 0 0 0 1 0 1 3 2 0 0 0 0 0 10 0 1064.4921 Q15776 Q15776 187 196 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 yes yes 2 0.006974 74.698 By MS/MS By MS/MS 1 1 1899100 0 1899100 402 2011 448 1007;1008 935;936 936 3920 2 AMSTTSISSPQPGK EIFKQKERAMSTTSIS ISSPQPGKLRSPFLQK R A M G K L 1 0 0 0 0 1 0 1 0 1 0 1 1 0 2 4 2 0 0 0 0 0 14 0 1390.6762 H0Y5J4;Q9UJU6;B4DDD6 H0Y5J4 196 209 DBNL Drebrin-like protein yes no 2 7.8836E-27 165.78 By MS/MS By MS/MS 5 5 191530000 99457000 92074000 403 1027 449;450;451 1009;1010;1011;1012;1013;1014;1015;1016;1017;1018 937;938;939;940;941;942;943;944 942 125 1904;1905;1906 8 AMSTTSISSPQPGKLR EIFKQKERAMSTTSIS SPQPGKLRSPFLQKQL R A M L R S 1 1 0 0 0 1 0 1 0 1 1 1 1 0 2 4 2 0 0 0 0 0 16 1 1659.8614 H0Y5J4;Q9UJU6;B4DDD6 H0Y5J4 196 211 DBNL Drebrin-like protein yes no 2;3 0.00023883 98.676 By MS/MS By MS/MS 3 3 35706000 19880000 15826000 404 1027 452;453 1019;1020;1021;1022;1023;1024 945;946;947;948 945 1904;1905;1906 4 AMTLSPQEEVAAGQMASSSR TNHLVAGRAMTLSPQE GQMASSSRSGPVKLEF R A M S R S 4 1 0 0 0 2 2 1 0 0 1 0 2 0 1 4 1 0 0 1 0 0 20 0 2049.9459 Q9Y6A5 Q9Y6A5 313 332 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 2;3 8.848E-08 85.837 By MS/MS By MS/MS 1 3 15525000 6186100 9339000 405 2944 454;455 1025;1026;1027;1028 949;950;951 949 387 6113;7136 3 AMTVEKASPVGDGNFR SHPFPPAKAMTVEKAS PVGDGNFRNRSAPPCA K A M F R N 2 1 1 1 0 0 1 2 0 0 0 1 1 1 1 1 1 0 0 2 0 0 16 1 1677.8145 Q86YS7;H0YFC4 Q86YS7 845 860 C2CD5 C2 domain-containing protein 5 yes no 2;3 8.4883E-05 97.271 By MS/MS By MS/MS 2 2 20924000 12493000 8431400 406 2258 456 1029;1030;1031;1032 952;953;954 952 4529 3 ANASPQKPLDLK LTPTGDPRANASPQKP PQKPLDLKQLKQRAAA R A N L K Q 2 0 1 1 0 1 0 0 0 0 2 2 0 0 2 1 0 0 0 0 0 0 12 1 1280.7089 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7;C9JQE8 C9JE98 935 946 NCOR2 Nuclear receptor corepressor 2 yes no 3 0.0053899 84.198 By MS/MS By MS/MS 1 1 5195500 2536900 2658600 407 552 457 1033;1034 955;956 955 1014 1 ANQQFLVYCEIDGSGNGWTVFQK LYFIKPLKANQQFLVY NGWTVFQK________ K A N Q K - 1 0 2 1 1 3 1 3 0 1 1 1 0 2 0 1 1 1 1 2 0 0 23 0 2660.2329 C9JPQ9;C9JU00;C9JEU5;C9JC84;P02679 C9JPQ9 97 119 FGG Fibrinogen gamma chain yes no 2 7.4114E-13 97.579 By MS/MS By matching 1 1 25872000 16534000 9337500 408 585 458 1035;1036 957 957 4 1 ANSDIISLNFR LGMENFARANSDIISL DIISLNFRSASMISSD R A N F R S 1 1 2 1 0 0 0 0 0 2 1 0 0 1 0 2 0 0 0 0 0 0 11 0 1248.6463 Q8TC76 Q8TC76 299 309 FAM110B Protein FAM110B yes yes 2 7.4044E-06 136.01 By MS/MS By MS/MS 1 1 21113000 13031000 8081600 409 2376 459 1037;1038 958;959 959 4758 2 ANSDTDLVTSESR PENMTLQRANSDTDLV DLVTSESRSSLTASMY R A N S R S 1 1 1 2 0 0 1 0 0 0 1 0 0 0 0 3 2 0 0 1 0 0 13 0 1393.6321 Q9P2P5;C9JHL2;C9JPI9 Q9P2P5 46 58 HECW2 E3 ubiquitin-protein ligase HECW2 yes no 2 0.00015709 113.67 By MS/MS By MS/MS 1 1 22719000 11308000 11411000 410 2797 460 1039;1040 960;961 961 5737 2 ANSFVGTAQYVSPELLTEK SPESKQARANSFVGTA SPELLTEKSACKSSDL R A N E K S 2 0 1 0 0 1 2 1 0 0 2 1 0 1 1 2 2 0 1 2 0 0 19 0 2053.0368 E9PER6;Q6A1A2;O15530 E9PER6 212 230 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 yes no 2;3 4.1633E-05 80.786 By MS/MS By MS/MS 2 2 125620000 70898000 54725000 411 774 461 1041;1042;1043;1044 962;963 962 1400 2 ANSGGVDLDSSGEFASIEK RGMRSRPRANSGGVDL GEFASIEKMLATTDTN R A N E K M 2 0 1 2 0 0 2 3 0 1 1 1 0 1 0 4 0 0 0 1 0 0 19 0 1881.8592 A0A087X055;Q92766 A0A087X055 234 252 RREB1 Ras-responsive element-binding protein 1 yes no 2 1.2725E-13 122.64 By matching By MS/MS 1 2 22091000 12120000 9971100 412 124 462;463 1045;1046;1047 964;965 964 217;218 2 ANSISRLSDSK DKFSPRIRANSISRLS ISRLSDSKVKSMTSAH R A N S K V 1 1 1 1 0 0 0 0 0 1 1 1 0 0 0 4 0 0 0 0 0 0 11 1 1176.6099 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1167 1177 CEP170 Centrosomal protein of 170 kDa yes no 2 0.013714 69.314 By MS/MS By matching 1 1 10293000 4479100 5813600 413 1006 464 1048;1049 966 966 1834 1 ANSLGDLYAQK RQLSTCQRANSLGDLY LGDLYAQKNSGVTANG R A N Q K N 2 0 1 1 0 1 0 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 11 0 1178.5932 Q13009 Q13009 229 239 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 yes yes 2 8.8866E-06 122.39 By MS/MS By MS/MS 1 1 29425000 15664000 13761000 414 1890 465 1050;1051 967;968 968 3606 2 ANSMEGLMPR LAKLQRTRANSMEGLM SMEGLMPRWVPDRAFS R A N P R W 1 1 1 0 0 0 1 1 0 0 1 0 2 0 1 1 0 0 0 0 0 0 10 0 1104.5056 O43306 O43306 574 583 ADCY6 Adenylate cyclase type 6 yes yes 2 0.0029702 84.615 By MS/MS By MS/MS 1 1 3885100 1798900 2086100 415 1378 466 1052;1053 969;970 969 2522 2 ANSPEKPPEAGAAHKPR ASRTQVQKANSPEKPP AGAAHKPRARLAALKR K A N P R A 4 1 1 0 0 0 2 1 1 0 0 2 0 0 4 1 0 0 0 0 0 0 17 2 1755.9016 F8WDB4;Q9UFC0 F8WDB4 58 74 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3;4 9.067E-06 106.19 By MS/MS By MS/MS 2 3 75542000 15924000 59618000 416 950 467 1054;1055;1056;1057;1058 971;972;973 971 1722 3 ANSTSDSVFTETPSPVLK PGHNEFFRANSTSDSV ETPSPVLKNAISLPTI R A N L K N 1 0 1 1 0 0 1 0 0 0 1 1 0 1 2 4 3 0 0 2 0 0 18 0 1878.9211 C9JEZ4;Q9UKI2 C9JEZ4 87 104 CDC42EP3 Cdc42 effector protein 3 yes no 2 0.00013952 80.142 By MS/MS By MS/MS 2 2 17806000 10005000 7800400 417 588 468;469 1059;1060;1061;1062 974;975;976;977 976 1068;1069;1070;6377 4 ANTEPRANLHMNLYETSPLTQTTEK PSSQHFLKANTEPRAN PLTQTTEKQGAQQSLE K A N E K Q 2 1 3 0 0 1 3 0 1 0 3 1 1 0 2 1 5 0 1 0 0 0 25 1 2858.3869 H7C5G6;Q0VF49 H7C5G6 611 635 KIAA2012 Uncharacterized protein KIAA2012 yes no 3 0.0050898 57.484 By MS/MS 1 1991400 1991400 0 418 1189 470 1063 978 978 2154;6550;6551 0 ANVSSPHR XIHEQWEKANVSSPHR ANVSSPHREFPPATAR K A N H R E 1 1 1 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 0 1 0 0 8 0 866.43586 H0Y555;Q5QPM9;Q5QPM7;Q92530 H0Y555 9 16 PSMF1 Proteasome inhibitor PI31 subunit yes no 2 0.0054148 109.79 By MS/MS By MS/MS 1 1 22017000 12934000 9082400 419 1023 471 1064;1065 979;980 980 1900;1901 2 ANVSSPHREFPPATAR XIHEQWEKANVSSPHR EFPPATAREVDPLRIP K A N A R E 3 2 1 0 0 0 1 0 1 0 0 0 0 1 3 2 1 0 0 1 0 0 16 1 1735.8754 H0Y555;Q5QPM9;Q5QPM7;Q92530 H0Y555 9 24 PSMF1 Proteasome inhibitor PI31 subunit yes no 3 0.0011888 69.422 By MS/MS By MS/MS 6 8 84089000 40394000 43694000 420 1023 472 1066;1067;1068;1069;1070;1071;1072;1073;1074;1075;1076;1077;1078;1079 981;982;983;984;985;986;987;988;989;990 988 1900;1901 10 ANYLEDR VSARQKPRANYLEDRK RANYLEDRKNGSKLIV R A N D R K 1 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 7 0 879.40865 O00186 O00186 519 525 STXBP3 Syntaxin-binding protein 3 yes yes 2 0.0050305 101.33 By MS/MS By MS/MS 1 1 5489300 2540400 2948900 421 1323 473 1080;1081 991;992 991 7495 2 APAGPSLEETSVSSPK SPPDWWKKAPAGPSLE ETSVSSPKGSSEPCWL K A P P K G 2 0 0 0 0 0 2 1 0 0 1 1 0 0 3 4 1 0 0 1 0 0 16 0 1555.773 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 477 492 HEATR6 HEAT repeat-containing protein 6 yes no 2 0.00013516 105.46 By MS/MS By MS/MS 1 1 17842000 9143100 8699000 422 92 474 1082;1083 993;994;995 995 171;172 3 APAGQEEPGTPPSSPLSAEQLDR AAAIPAKKAPAGQEEP LSAEQLDRIQRNKAAA K A P D R I 3 1 0 1 0 2 3 2 0 0 2 0 0 0 5 3 1 0 0 0 0 0 23 0 2333.1135 P13051;Q68DM5;F5GYA2 P13051 51 73 UNG;DKFZp781L1143 Uracil-DNA glycosylase yes no 3 0.0070389 57.097 By matching By MS/MS 1 1 16662000 8034600 8627600 423 1574 475 1084;1085 996 996 2891;2892;6671 1 APASPGAGNPPGTPK VSAYDQLKAPASPGAG GNPPGTPKGKRELMSN K A P P K G 3 0 1 0 0 0 0 3 0 0 0 1 0 0 5 1 1 0 0 0 0 0 15 0 1317.6677 Q9ULD9;B3KPE6;A0A0C4DGB8 Q9ULD9 624 638 ZNF608 Zinc finger protein 608 yes no 2 0.028498 42.257 By matching By MS/MS 1 1 4646000 2317300 2328800 424 2843 476 1086;1087 997 997 0 APELKEK LSQAEAMKAPELKEKL KAPELKEKLEESEKLI K A P E K L 1 0 0 0 0 0 2 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 7 1 813.45962 A0A1B0GUA8;Q9H1H9 A0A1B0GUA8 389 395 KIF13A Kinesin-like protein KIF13A yes no 2 0.017657 62.715 By MS/MS By MS/MS 1 1 0 0 0 425 369 477 1088;1089 998;999 998 2 APELPNTSSSPSLK LNLTAKPKAPELPNTS TSSSPSLKMSSCVPRP K A P L K M 1 0 1 0 0 0 1 0 0 0 2 1 0 0 3 4 1 0 0 0 0 0 14 0 1426.7304 Q9UN79 Q9UN79 301 314 SOX13 Transcription factor SOX-13 yes yes 2 0.0083482 82.494 By matching By MS/MS 1 1 3851000 2333700 1517200 426 2860 478 1090;1091 1000 1000 7100 1 APFDLFENR ALLFVPRRAPFDLFEN PFDLFENRKKKNNIKL R A P N R K 1 1 1 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 0 0 0 0 9 0 1107.5349 P07900 P07900 347 355 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.027719 67.494 By MS/MS 1 914670 0 914670 427 1540 479 1092 1001 1001 1 APGASPGNPLSPSLSDKDR SLKKFACKAPGASPGN PSLSDKDRGLKGAGGS K A P D R G 2 1 1 2 0 0 0 2 0 0 2 1 0 0 4 4 0 0 0 0 0 0 19 1 1864.9279 Q7Z5J4 Q7Z5J4 1348 1366 RAI1 Retinoic acid-induced protein 1 yes yes 3 1.9036E-06 89.877 By MS/MS By MS/MS 1 1 14074000 8033800 6039900 428 2219 480 1093;1094 1002;1003 1003 4437 2 APGYPSSPVTTASGTTLR HHHHPGLRAPGYPSSP TASGTTLRLPPLQPEE R A P L R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 3 3 4 0 1 1 0 0 18 0 1761.8897 Q9HCK8 Q9HCK8 2513 2530 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 2 0.015662 53.252 By MS/MS 1 7831200 0 7831200 429 2694 481 1095 1004 1004 5498;5499 1 APIDTSDVEEK ITAFKMEKAPIDTSDV DTSDVEEKAEEIIAEA K A P E K A 1 0 0 2 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1202.5667 D6RIY6;Q06265 D6RIY6 285 295 EXOSC9 Exosome complex component RRP45 yes no 2 0.01844 75.088 By MS/MS By MS/MS 1 1 10386000 5021500 5364900 430 685 482 1096;1097 1005;1006 1005 1210 2 APIIAVTR QVARYRPRAPIIAVTR APIIAVTRNPQTARQA R A P T R N 2 1 0 0 0 0 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 8 0 839.52289 B4DNK4;H3BTN5;P14618;H3BR70 B4DNK4 374 381 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 0.015082 92.47 By MS/MS By matching 1 1 8930600 4863200 4067500 431 485 483 1098;1099 1007 1007 1 APKEEADYEDDFLEYDQEHIR EEESLMWRAPKEEADY EYDQEHIRFIDNMLMG R A P I R F 2 1 0 4 0 1 5 0 1 1 1 1 0 1 1 0 0 0 2 0 0 0 21 1 2611.1351 Q9UPY3;H0YJZ6 Q9UPY3 1431 1451 DICER1 Endoribonuclease Dicer yes no 3 9.3903E-10 101.49 By MS/MS By MS/MS 1 1 16487000 8008500 8478800 432 2873 484 1100;1101 1008;1009;1010;1011 1011 7947 4 APLATGEDDDDEVPDLVENFDEASKNEAN PKQSVDGKAPLATGED EASKNEAN________ K A P A N - 4 0 3 6 0 0 5 1 0 0 2 1 0 1 2 1 1 0 0 2 0 0 29 1 3118.3375 P20290 P20290 178 206 BTF3 Transcription factor BTF3 yes yes 3 0.0017807 60.621 By MS/MS By matching 1 1 67444000 31760000 35684000 433 1609 485 1102;1103 1012 1012 1 APLKPYPVSPSDK EFIFTTIKAPLKPYPV YPVSPSDKVLIQEKTQ K A P D K V 1 0 0 1 0 0 0 0 0 0 1 2 0 0 4 2 0 0 1 1 0 0 13 1 1397.7555 Q5TCC6;J3KR24;A0A0A0MSX9;P41252 Q5TCC6 92 104 IARS Isoleucine--tRNA ligase, cytoplasmic yes no 2;3 2.5448E-07 125.97 By MS/MS By MS/MS 1 2 9705800 4355900 5349900 434 229 486 1104;1105;1106 1013;1014;1015;1016 1015 420;421 4 APPQTHLPSGASSGTGSASATHGGGSPPGTR KVIHLVERAPPQTHLP GGSPPGTRGPGASVHD R A P T R G 4 1 0 0 0 1 0 7 2 0 1 0 0 0 5 6 4 0 0 0 0 0 31 0 2784.3175 A0A024RCR6;A0A0G2JK23;P46379;A0A0G2JL47;F6TC96;F6UR09;F6U1F2;F6XTU0;A0A0G2JJR8;A0A1B0GX79;F6WML8;F6VEM6;F6X9W3;F6U341;F6S6P2;X6REW1;A0A0G2JJM1 A0A024RCR6 88 118 BAT3;BAG6 Large proline-rich protein BAG6 yes no 3 0.0073964 45.635 By MS/MS By matching 1 1 28385000 15334000 13050000 435 4 487 1107;1108 1017 1017 4 1 APPTLQAETATKPQATSAPSPAPK MVPATDTKAPPTLQAE SAPSPAPKQSFLFGTQ K A P P K Q 6 0 0 0 0 2 1 0 0 0 1 2 0 0 6 2 4 0 0 0 0 0 24 1 2359.2383 A0A087WY75;A0A075B7F8;A8CG34;Q96HA1 A0A087WY75 413 436 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 no no 3 0.00038497 63.085 By MS/MS By MS/MS 1 1 18686000 8265300 10421000 436 18;2498 488 1109;1110 1018;1019 1019 36;37 2 APQTSSSPPPVR HSPSPRPRAPQTSSSP SSSPPPVRRGASSSPQ R A P V R R 1 1 0 0 0 1 0 0 0 0 0 0 0 0 4 3 1 0 0 1 0 0 12 0 1222.6306 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 699 710 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2 6.778E-62 201.09 By MS/MS By MS/MS 2 2 232510000 127920000 104590000 437 442;1311 489;490 1111;1112;1113;1114 1020;1021;1022;1023 1021 833;834;835 2 APQTSSSPPPVRR HSPSPRPRAPQTSSSP SSPPPVRRGASSSPQR R A P R R G 1 2 0 0 0 1 0 0 0 0 0 0 0 0 4 3 1 0 0 1 0 0 13 1 1378.7317 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 699 711 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2 0.0046755 87.363 By MS/MS By MS/MS 1 1 29885000 14767000 15118000 438 442;1311 491 1115;1116 1024;1025 1024 833;834;835 1 APSDSSLGTPSDGRPELR DFSQPMNRAPSDSSLG SDGRPELRGPGRSRTK R A P L R G 1 2 0 2 0 0 1 2 0 0 2 0 0 0 3 4 1 0 0 0 0 0 18 1 1840.8915 M0R0F9;W4VSQ9;Q15642;M0R2H7 M0R0F9 186 203 TRIP10 Cdc42-interacting protein 4 yes no 3 0.00015984 76.391 By MS/MS By MS/MS 2 2 30548000 17086000 13462000 439 1312 492;493 1117;1118;1119;1120 1026;1027;1028 1027 2357;2358 3 APSLTDLVK SIPPTLTKAPSLTDLV PSLTDLVKSGPGKAKE K A P V K S 1 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 1 0 0 1 0 0 9 0 942.5386 O15014 O15014 1053 1061 ZNF609 Zinc finger protein 609 yes yes 2 0.0029561 94.465 By MS/MS By MS/MS 1 1 4881600 2720200 2161500 440 1351 494 1121;1122 1029;1030;1031;1032 1032 2463;6595 4 APSPPLSQVFQTR TTSLLGQRAPSPPLSQ LSQVFQTRAASADYLR R A P T R A 1 1 0 0 0 2 0 0 0 0 1 0 0 1 3 2 1 0 0 1 0 0 13 0 1426.7569 Q9NRA8;B1AKL4 Q9NRA8 562 574 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 2 0.016497 60.598 By MS/MS By MS/MS 1 2 6086100 2858500 3227700 441 2719 495 1123;1124;1125 1033;1034;1035 1033 5551 3 APSPPVEHPR DPPRRELRAPSPPVEH SPPVEHPRLLRSVPTP R A P P R L 1 1 0 0 0 0 1 0 1 0 0 0 0 0 4 1 0 0 0 1 0 0 10 0 1085.5618 Q86WR7 Q86WR7 177 186 PROSER2 Proline and serine-rich protein 2 yes yes 3 0.01554 61.765 By MS/MS By MS/MS 1 1 0 0 0 442 2248 496 1126;1127 1036;1037 1036 4501 2 APSPSGLMSPSR GVKRPTSRAPSPSGLM SGLMSPSRLPGSRERD R A P S R L 1 1 0 0 0 0 0 1 0 0 1 0 1 0 3 4 0 0 0 0 0 0 12 0 1185.5812 Q9P1Y5 Q9P1Y5 1072 1083 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.0042686 76.357 By MS/MS By matching 1 1 3973800 2068000 1905800 443 2778 497 1128;1129 1038 1038 5696 1 APSPTKPLR AAQRSGPRAPSPTKPL PSPTKPLRRSQRKSGS R A P L R R 1 1 0 0 0 0 0 0 0 0 1 1 0 0 3 1 1 0 0 0 0 0 9 1 965.56581 B5MBX0;Q96FF9 B5MBX0 19 27 CDCA5 Sororin yes no 2 0.0058344 105.17 By MS/MS By MS/MS 1 1 24656000 13411000 11245000 444 500 498 1130;1131 1039;1040;1041 1041 937 3 APSRQDVYGPQPQVR RPSMEGYRAPSRQDVY YGPQPQVRVGGSSVDL R A P V R V 1 2 0 1 0 3 0 1 0 0 0 0 0 0 3 1 0 0 1 2 0 0 15 1 1696.8645 C9JZR2;O60716;E9PRE2 C9JZR2 250 264 CTNND1 Catenin delta-1 yes no 3 2.7884E-45 179.83 By MS/MS By MS/MS 1 1 28023000 15365000 12658000 445 624 499 1132;1133 1042;1043 1042 7331 2 APSSDEECFFDLLTK VPRTSIPRAPSSDEEC CFFDLLTKFQSSRMDD R A P T K F 1 0 0 2 1 0 2 0 0 0 2 1 0 2 1 2 1 0 0 0 0 0 15 0 1757.7818 A0A0A0MRC4;A0A0A0MSK4;Q86YR5 A0A0A0MRC4 468 482 GPSM1 G-protein-signaling modulator 1 yes no 2 1.2701E-83 200 By MS/MS By MS/MS 1 1 19821000 11017000 8803600 446 178 500 1134;1135 1044;1045 1044 316 2 APSSPVAKPGPVK AKVPASKRAPSSPVAK VAKPGPVKTLTRKKNK R A P V K T 2 0 0 0 0 0 0 1 0 0 0 2 0 0 4 2 0 0 0 2 0 0 13 1 1233.7081 A0A0C4DG31;Q9GZR2 A0A0C4DG31 12 24 REXO4 RNA exonuclease 4 yes no 2;3 0.0028794 86.738 By MS/MS By MS/MS 2 2 41646000 23139000 18507000 447 278 501 1136;1137;1138;1139 1046;1047;1048;1049 1046 496;497 4 APSYSGLSMVSGVK AGLSGHHRAPSYSGLS LSMVSGVKQGSGPAPT R A P V K Q 1 0 0 0 0 0 0 2 0 0 1 1 1 0 1 4 0 0 1 2 0 0 14 0 1381.6912 Q9UBP0 Q9UBP0 266 279 SPAST Spastin yes yes 2 0.0021229 81.128 By MS/MS By MS/MS 1 1 6042200 3251500 2790800 448 2800 502 1140;1141 1050;1051 1050 5742 2 APTKEFYA PSSAAYQKAPTKEFYA APTKEFYA________ K A P Y A - 2 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 8 1 925.45453 E7ESK6;E9PBI9;P34741 E7ESK6 158 165 SDC2 Syndecan;Syndecan-2 yes no 2 0.0082343 89.142 By MS/MS By matching 1 1 27209000 14810000 12399000 449 733 503 1142;1143 1052 1052 7364 1 APVHFVEPLSPTGVAGHR NSQDHKVKAPVHFVEP PTGVAGHRKAPRLGQG K A P H R K 2 1 0 0 0 0 1 2 2 0 1 0 0 1 3 1 1 0 0 3 0 0 18 0 1869.985 Q5T5Y3 Q5T5Y3 1071 1088 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 3 5.1445E-06 91.64 By MS/MS By MS/MS 1 1 21577000 11393000 10184000 450 2099 504 1144;1145 1053;1054;1055 1053 4154 3 APVPEPGLDLSLSPRPDSPQPR EPQVPQLRAPVPEPGL RPDSPQPRHGSPGRRK R A P P R H 1 2 0 2 0 1 1 1 0 0 3 0 0 0 7 3 0 0 0 1 0 0 22 1 2324.2125 Q8TAP8 Q8TAP8 35 56 PPP1R35 Protein phosphatase 1 regulatory subunit 35 yes yes 3 0.0015333 58.073 By matching By MS/MS 1 1 18929000 9366700 9562800 451 2368 505 1146;1147 1056 1056 4746 1 APVPSTCSSTFPEELSPPSHQAK DLENFLQKAPVPSTCS SPPSHQAKREIRFLEL K A P A K R 2 0 0 0 1 1 2 0 1 0 1 1 0 1 5 5 2 0 0 1 0 0 23 0 2453.1533 A0A087WY61;Q14980;F5H6Y5;F5H4J1;F5H0Z7;F5H763 A0A087WY61 154 176 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 2.8149E-09 87.052 By MS/MS By MS/MS 1 1 29380000 12891000 16489000 452 95 506 1148;1149 1057;1058;1059;1060 1060 173 4 APVQPQQSPAAAPGGTDEKPSGK MEEGGRDKAPVQPQQS TDEKPSGKERRDAGDK K A P G K E 4 0 0 1 0 3 1 3 0 0 0 2 0 0 5 2 1 0 0 1 0 0 23 1 2217.1026 Q13200;F8WBS8;C9JPC0 Q13200 9 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 3 0.0014531 57.227 By MS/MS By MS/MS 1 1 17318000 8279400 9038400 453 1903 507 1150;1151 1061;1062;1063 1061 3639 3 AQAVSEEEEEEEGK SKEAPKRKAQAVSEEE EEEEEEGKSSSPKKKI K A Q G K S 2 0 0 0 0 1 7 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 14 0 1562.6584 G3V529;Q9GZR7 G3V529 35 48 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 0.0034492 73.834 By MS/MS By MS/MS 1 1 7553400 4042800 3510500 454 978 508 1152;1153 1064;1065 1065 1780 2 AQAVSEEEEEEEGKSSSPK SKEAPKRKAQAVSEEE EGKSSSPKKKIKLKKS K A Q P K K 2 0 0 0 0 1 7 1 0 0 0 2 0 0 1 4 0 0 0 1 0 0 19 1 2048.9022 G3V529;Q9GZR7 G3V529 35 53 DDX24 ATP-dependent RNA helicase DDX24 yes no 2;3 3.4716E-07 105.38 By MS/MS By MS/MS 4 4 63482000 33291000 30191000 455 978 509;510 1154;1155;1156;1157;1158;1159;1160;1161 1066;1067;1068;1069 1067 1780 4 AQFEGIVTDLIR HLNMKLTRAQFEGIVT GIVTDLIRRTIAPCQK R A Q I R R 1 1 0 1 0 1 1 1 0 2 1 0 0 1 0 0 1 0 0 1 0 0 12 0 1360.7351 P38646;H0YBG6 P38646 349 360 HSPA9 Stress-70 protein, mitochondrial yes no 2 0.015473 68.786 By MS/MS 1 2311000 0 2311000 456 1680 511 1162 1070 1070 1 AQGEPVAGHESPKIPYEK QLRDRLCRAQGEPVAG SPKIPYEKQQLPKGRP R A Q E K Q 2 0 0 0 0 1 3 2 1 1 0 2 0 0 3 1 0 0 1 1 0 0 18 1 1935.969 H7BXG7;D6REX3;O94979;H0YAB3;D6RHZ5 H7BXG7 522 539 SEC31A Protein transport protein Sec31A yes no 3;4 0.0075966 53.254 By MS/MS By MS/MS 2 2 115730000 63476000 52254000 457 675 512 1163;1164;1165;1166 1071;1072;1073 1072 1201 3 AQGEPVAGHESPKIPYEKQQLPK QLRDRLCRAQGEPVAG YEKQQLPKGRPGPVAG R A Q P K G 2 0 0 0 0 3 3 2 1 1 1 3 0 0 4 1 0 0 1 1 0 0 23 2 2530.318 H7BXG7;D6REX3;O94979;H0YAB3;D6RHZ5 H7BXG7 522 544 SEC31A Protein transport protein Sec31A yes no 3;4 9.4833E-05 74.364 By MS/MS By MS/MS 2 2 67349000 39683000 27666000 458 675 513 1167;1168;1169;1170 1074;1075;1076;1077;1078 1075 1201 5 AQGVRSPLLR KLNLQDGRAQGVRSPL GVRSPLLRQSSSEQCS R A Q L R Q 1 2 0 0 0 1 0 1 0 0 2 0 0 0 1 1 0 0 0 1 0 0 10 1 1095.6513 O60343;Q5JU47 O60343 661 670 TBC1D4 TBC1 domain family member 4 yes no 2 0.020073 66.538 By MS/MS By matching 1 1 61386000 31819000 29567000 459 1407 514 1171;1172 1079 1079 2587 1 AQIPEGDYLSYR GDPGSTRRAQIPEGDY EGDYLSYREFHSAGRT R A Q Y R E 1 1 0 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 0 12 0 1410.6779 Q96RT1 Q96RT1 1097 1108 ERBB2IP Protein LAP2 yes yes 2 0.00099598 93.096 By MS/MS By MS/MS 1 1 17457000 9688200 7768800 460 2536 515 1173;1174 1080;1081 1080 7855 2 AQISSPNLR VARIAPQRAQISSPNL QISSPNLRTRPPPRRE R A Q L R T 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 9 0 984.53524 H0Y507;Q5TCZ1 H0Y507 344 352 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.0070432 80.102 By MS/MS By MS/MS 1 1 10870000 5815900 5054000 461 1022 516 1175;1176 1082;1083 1082 1895;1896 2 AQKLPDLSPVENK QPRAGPIKAQKLPDLS DLSPVENKEHKPGPIG K A Q N K E 1 0 1 1 0 1 1 0 0 0 2 2 0 0 2 1 0 0 0 1 0 0 13 1 1437.7827 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2100 2112 PRRC2C Protein PRRC2C yes no 2;3 6.9672E-12 149.32 By MS/MS By MS/MS 2 2 27796000 16358000 11438000 462 715 517 1177;1178;1179;1180 1084;1085;1086;1087 1084 1267 4 AQLEKTIETLR SKDLMKEKAQLEKTIE EKTIETLRENSERQIK K A Q L R E 1 1 0 0 0 1 2 0 0 1 2 1 0 0 0 0 2 0 0 0 0 0 11 1 1300.7351 Q3V6T2;A0A087WXD9 Q3V6T2 536 546 CCDC88A Girdin yes no 1 0.027432 47.187 By MS/MS 1 5361800 0 5361800 463 2040 518 1181 1088 1088 1 AQLEPVASPAK ELQLVTYKAQLEPVAS EPVASPAKKPKVQSGS K A Q A K K 3 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 11 0 1109.6081 Q15149 Q15149 1428 1438 PLEC Plectin yes yes 2 0.0084248 71.806 By matching By MS/MS 1 1 5569900 2351800 3218100 464 1979 519 1182;1183 1089 1089 3859 1 AQLSPGIYDDTSAR STLHEAPKAQLSPGIY IYDDTSARRTPVSYQN K A Q A R R 2 1 0 2 0 1 0 1 0 1 1 0 0 0 1 2 1 0 1 0 0 0 14 0 1492.7158 A0A088AWL3;O75376;E7EVK1 A0A088AWL3 1376 1389 NCOR1 Nuclear receptor corepressor 1 yes no 2 2.331E-27 171.15 By MS/MS By MS/MS 1 1 93056000 53251000 39805000 465 151 520 1184;1185 1090;1091 1091 264 2 AQLYLPSTSPPHEGLDGFAQELSR RQAEATARAQLYLPST GFAQELSR________ R A Q S R - 2 1 0 1 0 2 2 2 1 0 4 0 0 1 3 3 1 0 1 0 0 0 24 0 2612.2871 I3L465;I3L1Z8;I3L1A6;Q8N137 I3L465 54 77 CNTROB Centrobin yes no 3 0.00054445 59.678 By MS/MS By matching 1 1 10084000 6213000 3871000 466 1199 521 1186;1187 1092 1092 2180 1 AQPATPGLGSR SSAPGAPKAQPATPGL ATPGLGSRIRAIQESV K A Q S R I 2 1 0 0 0 1 0 2 0 0 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1053.5567 Q9BWT7 Q9BWT7 897 907 CARD10 Caspase recruitment domain-containing protein 10 yes yes 2 0.020146 63.662 By MS/MS 1 0 0 0 467 2594 522 1188 1093 1093 5252 1 AQPFGFIDSDTDAEEER PAEVHLERAQPFGFID DTDAEEERIPATPVVI R A Q E R I 2 1 0 3 0 1 3 1 0 1 0 0 0 2 1 1 1 0 0 0 0 0 17 0 1925.8279 Q14676 Q14676 321 337 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 0.0037845 65.949 By matching By MS/MS 1 1 4845700 2402200 2443500 468 1951 523 1189;1190 1094 1094 3775 1 AQPFGFIDSDTDAEEERIPATPVVIPMK PAEVHLERAQPFGFID TPVVIPMKKRKIFHGV R A Q M K K 3 1 0 3 0 1 3 1 0 3 0 1 1 2 4 1 2 0 0 2 0 0 28 1 3072.5114 Q14676 Q14676 321 348 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 1.1079E-08 84.025 By MS/MS By matching 1 1 102710000 92326000 10382000 469 1951 524 1191;1192 1095 1095 3775 1 AQPSSASYQPVPADPFAIVSR EAYSAMPRAQPSSASY DPFAIVSRAQQMVEIL R A Q S R A 4 1 0 1 0 2 0 0 0 1 0 0 0 1 4 4 0 0 1 2 0 0 21 0 2187.096 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 413 433 AMOT Angiomotin yes no 2;3 3.7627E-05 78.902 By MS/MS By MS/MS 4 4 88863000 46630000 42234000 470 2051 525 1193;1194;1195;1196;1197;1198;1199;1200 1096;1097;1098;1099;1100 1097 4019;4020;4021 5 AQQELVPPQQQASPPQLPK QGQPGLERAQQELVPP ASPPQLPKAMFSELSN R A Q P K A 2 0 0 0 0 6 1 0 0 0 2 1 0 0 5 1 0 0 0 1 0 0 19 0 2083.1062 F1T0I1;J3KNL6;O15027 F1T0I1 1057 1075 SEC16A Protein transport protein Sec16A yes no 2;3 2.1913E-07 107.62 By MS/MS By MS/MS 2 3 40931000 23830000 17101000 471 846 526 1201;1202;1203;1204;1205 1101;1102;1103;1104;1105;1106;1107 1107 1523 7 AQQGLYQVPGPSPQFQSPPAK YLVPTPSKAQQGLYQV QFQSPPAKQTSTFSKQ K A Q A K Q 2 0 0 0 0 5 0 2 0 0 1 1 0 1 5 2 0 0 1 1 0 0 21 0 2224.1277 P56945;H3BVF0;H3BSY4;H3BQJ7;H3BSB2 P56945 123 143 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 3 5.9301E-05 75.608 By MS/MS 1 5713500 0 5713500 472 1779 527 1206 1108 1108 7648 1 AQQRAESPESSAIESTQSTPQK KQHRVSRRAQQRAESP STQSTPQKGRGRPSKT R A Q Q K G 3 1 0 0 0 4 3 0 0 1 0 1 0 0 2 5 2 0 0 0 0 0 22 1 2359.1252 Q9NTI5 Q9NTI5 1352 1373 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 3 1.0514E-05 79.029 By matching By MS/MS 1 1 9843000 4904800 4938200 473 2731 528 1207;1208 1109 1109 5582;5583;7067;7068 1 AQQRAESPESSAIESTQSTPQKGR KQHRVSRRAQQRAESP QSTPQKGRGRPSKTPS R A Q G R G 3 2 0 0 0 4 3 1 0 1 0 1 0 0 2 5 2 0 0 0 0 0 24 2 2572.2477 Q9NTI5 Q9NTI5 1352 1375 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 3 0.0014188 62.999 By matching By MS/MS 1 1 23518000 11472000 12045000 474 2731 529 1209;1210 1110 1110 5582;5583;7067;7068 1 AQRPQSCTSVGR SSTPKLSRAQRPQSCT QSCTSVGRVTVHSTPV R A Q G R V 1 2 0 0 1 2 0 1 0 0 0 0 0 0 1 2 1 0 0 1 0 0 12 1 1345.6521 Q9NYZ3 Q9NYZ3 472 483 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.017662 61.532 By matching By MS/MS 1 1 13309000 8052200 5256700 475 2762 530 1211;1212 1111 1111 5667 0 AQSLAEQTSDTAGLESSTR KHHIRVKKAQSLAEQT AGLESSTRSESGTDLR K A Q T R S 3 1 0 1 0 2 2 1 0 0 2 0 0 0 0 4 3 0 0 0 0 0 19 0 1950.913 Q12986 Q12986 121 139 NFX1 Transcriptional repressor NF-X1 yes yes 2 0.00071605 74.519 By MS/MS 1 0 0 0 476 1889 531 1213 1112 1112 3603 1 AQSLKAPSIATIK SSHTLPRRAQSLKAPS APSIATIKSLADCNFS R A Q I K S 3 0 0 0 0 1 0 0 0 2 1 2 0 0 1 2 1 0 0 0 0 0 13 1 1326.7871 Q6R327 Q6R327 1300 1312 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 0.024906 58.824 By MS/MS By matching 1 1 2884600 1461800 1422800 477 2165 532 1214;1215 1113 1113 1 AQSLVISPPAPSPR SEIHVEVKAQSLVISP SPPAPSPRKTPVASDQ K A Q P R K 2 1 0 0 0 1 0 0 0 1 1 0 0 0 4 3 0 0 0 1 0 0 14 0 1418.7882 P46013 P46013 573 586 MKI67 Antigen KI-67 yes yes 2 3.8701E-28 173.03 By MS/MS By MS/MS 2 2 40936000 22689000 18247000 478 1704 533;534 1216;1217;1218;1219 1114;1115;1116;1117;1118;1119 1115 3138;3139 6 AQSNGSGNGSDSEMDTSSLER ITIRNINKAQSNGSGN MDTSSLERGRKVSIVS K A Q E R G 1 1 2 2 0 1 2 3 0 0 1 0 1 0 0 6 1 0 0 0 0 0 21 0 2127.8611 Q9NRY4 Q9NRY4 1125 1145 ARHGAP35 Rho GTPase-activating protein 35 yes yes 2 0.024378 53.491 By MS/MS By matching 1 1 9655600 5022700 4632900 479 2725 535 1220;1221 1120 1120 5567 1 AQSSPAAPASLSAPEPASQAR GGHRPLSRAQSSPAAP PEPASQARVLSSSETP R A Q A R V 7 1 0 0 0 2 1 0 0 0 1 0 0 0 4 5 0 0 0 0 0 0 21 0 1992.9865 H0YI15;J3KPH8;Q8WUI4 H0YI15 22 42 HDAC7 Histone deacetylase;Histone deacetylase 7 yes no 2 0.017126 91.725 By MS/MS 1 0 0 0 480 1075 536 1222 1121 1121 1986 1 AQSSPASATFPVSVQEPPTKPR GGHRPLSRAQSSPASA QEPPTKPRFTTGLVYD R A Q P R F 3 1 0 0 0 2 1 0 0 0 0 1 0 1 5 4 2 0 0 2 0 0 22 1 2281.1703 P56524 P56524 630 651 HDAC4 Histone deacetylase 4 yes yes 3 0.00059809 65.428 By MS/MS By MS/MS 1 1 24255000 13227000 11028000 481 1777 537 1223;1224 1122;1123 1122 3349 2 AQSTDSLGTSGSLQSK MFKDGLRRAQSTDSLG TSGSLQSKALGYNYKA R A Q S K A 1 0 0 1 0 2 0 2 0 0 2 1 0 0 0 5 2 0 0 0 0 0 16 0 1565.7533 I3L456;Q15276 I3L456 92 107 RABEP1 Rab GTPase-binding effector protein 1 yes no 2 5.7328E-102 216 By MS/MS By MS/MS 2 2 30074000 15213000 14861000 482 1214 538;539 1225;1226;1227;1228 1124;1125;1126 1125 2198;2199 3 AQSYDIQAWK PRRRLRNRAQSYDIQA SYDIQAWKKQCEELLN R A Q W K K 2 0 0 1 0 2 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 10 0 1208.5826 Q8WWQ0 Q8WWQ0 1313 1322 PHIP PH-interacting protein yes yes 2 2.2784E-05 126.12 By MS/MS By MS/MS 1 1 9737200 4848000 4889200 483 2410 540 1229;1230 1127;1128 1127 4832 2 AQSYDIQAWKK PRRRLRNRAQSYDIQA YDIQAWKKQCEELLNL R A Q K K Q 2 0 0 1 0 2 0 0 0 1 0 2 0 0 0 1 0 1 1 0 0 0 11 1 1336.6776 Q8WWQ0 Q8WWQ0 1313 1323 PHIP PH-interacting protein yes yes 3 0.0022866 72.2 By MS/MS 1 1035300 1035300 0 484 2410 541 1231 1129 1129 4832 1 AQTAPTKTSPR CVGGKRGRAQTAPTKT APTKTSPRNAKKHDEL R A Q P R N 2 1 0 0 0 1 0 0 0 0 0 1 0 0 2 1 3 0 0 0 0 0 11 1 1156.62 Q14669 Q14669 1419 1429 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 0.0014351 112.02 By MS/MS By MS/MS 1 1 105230000 57809000 47423000 485 1949 542 1232;1233 1130;1131 1130 3759;6816;6817 2 AQTLPTSVVTITSESSPGKR QSTPASSRAQTLPTSV SESSPGKREKDKEKDK R A Q K R E 1 1 0 0 0 1 1 1 0 1 1 1 0 0 2 4 4 0 0 2 0 0 20 1 2058.0957 A0A087WUZ3;Q01082 A0A087WUZ3 2328 2347 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2;3 2.4887E-09 100.44 By MS/MS By MS/MS 3 3 120900000 69101000 51795000 486 53 543;544 1234;1235;1236;1237;1238;1239 1132;1133;1134;1135;1136;1137;1138;1139 1133 95;96;6225 8 AQTPPGPSLSGSKSPCPQEK ISPYPKVKAQTPPGPS KSPCPQEKSKDSLVQS K A Q E K S 1 0 0 0 1 2 1 2 0 0 1 2 0 0 5 4 1 0 0 0 0 0 20 1 2051.9946 Q9UQ35 Q9UQ35 1001 1020 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0015815 64.779 By MS/MS By MS/MS 2 2 159680000 78149000 81535000 487 2877 545;546 1240;1241;1242;1243 1140;1141;1142;1143 1143 5943;5944;7103 4 AQTQEFQGSEDYETALSGK KAREALQKAQTQEFQG YETALSGKEALSAALR K A Q G K E 2 0 0 1 0 3 3 2 0 0 1 1 0 1 0 2 2 0 1 0 0 0 19 0 2087.9284 A0A0A0MRG9;Q96SN8;C9K0C9;F8WF55;F8WCI3 A0A0A0MRG9 358 376 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes no 2 0.00080125 71.529 By MS/MS By matching 1 1 9025600 5248100 3777500 488 184 547 1244;1245 1144 1144 7198 1 AQVKATNESEDEIPQLVPIGK KKKRGRGKAQVKATNE PQLVPIGKKTPANEKV K A Q G K K 2 0 1 1 0 2 3 1 0 2 1 2 0 0 2 1 1 0 0 2 0 0 21 1 2265.1852 O76021;J3QSV6 O76021 353 373 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 3 1.3039E-10 107.85 By MS/MS By MS/MS 1 1 47359000 27454000 19905000 489 1454 548 1246;1247 1145;1146;1147 1145 2689;6641 3 AQVKATNESEDEIPQLVPIGKK KKKRGRGKAQVKATNE QLVPIGKKTPANEKVE K A Q K K T 2 0 1 1 0 2 3 1 0 2 1 3 0 0 2 1 1 0 0 2 0 0 22 2 2393.2802 O76021;J3QSV6 O76021 353 374 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 3 0.024849 56.079 By matching By MS/MS 1 1 10961000 5636900 5324300 490 1454 549 1248;1249 1148 1148 2689;6641 1 AREGSFESRYQQPFEDFR SGQLFHGRAREGSFES QQPFEDFRISQEHLAD R A R F R I 1 3 0 1 0 2 3 1 0 0 0 0 0 3 1 2 0 0 1 0 0 0 18 2 2248.0297 P19174;V9GY71;V9GYH5 P19174 1244 1261 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 3 0.0056338 61.361 By MS/MS By matching 1 1 20376000 10091000 10285000 491 1603 550 1250;1251 1149 1149 2956;2957;7570 1 ARELSESTALDAQSTEDQMELLVIK ________________ QMELLVIKVEEEEAGF M A R I K V 3 1 0 2 0 2 4 0 0 1 4 1 1 0 0 3 2 0 0 1 0 0 25 1 2776.3801 Q9BRR0 Q9BRR0 2 26 ZKSCAN3 Zinc finger protein with KRAB and SCAN domains 3 yes yes 3 0.01374 40.197 By MS/MS 1 2423900 2423900 0 492 2573 551 1252 1150 1150 345 5199 1 ARFEELNADLFR DFYTSITRARFEELNA ELNADLFRGTLDPVEK R A R F R G 2 2 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 12 1 1479.747 P11142;E9PKE3;E9PN89;E9PNE6;P54652;A8K7Q2 P11142 300 311 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 3 0.0060323 92.295 By MS/MS By MS/MS 1 1 964060 0 964060 493 1560 552 1253;1254 1151;1152 1152 2 ARGDSEALDEES SDRQERERARGDSEAL SEALDEES________ R A R E S - 2 1 0 2 0 0 3 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 12 1 1277.5372 Q7Z4V5;A0A087WZ99 Q7Z4V5 660 671 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 2 0.0012589 103.11 By MS/MS By MS/MS 1 1 77622000 41477000 36145000 494 2218 553 1255;1256 1153;1154;1155;1156 1155 4433 4 ARGEIGGLSLSPSPER RREARPARARGEIGGL SLSPSPERRKPPPPDP R A R E R R 1 2 0 0 0 0 2 3 0 1 2 0 0 0 2 3 0 0 0 0 0 0 16 1 1624.8533 A0A096LNX8;Q96GP6 A0A096LNX8 641 656 SCARF2 Scavenger receptor class F member 2 yes no 3 0.0062106 57.142 By MS/MS 1 1312500 1312500 0 495 155 554 1257 1157 1157 276 1 ARGQSGRGSASNQR A R Q R 2 3 1 0 0 2 0 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 14 2 1430.7087 REV__P49959 yes yes 2 0.020397 43.761 By MS/MS By matching 1 1 3843500 1527300 2316200 + 496 2987 555 1258;1259 1158 1158 6176;6177 1 ARHDSPDLAPNVTYSLPR SDTQQLRRARHDSPDL NVTYSLPRTKSGKAPE R A R P R T 2 2 1 2 0 0 0 0 1 0 2 0 0 0 3 2 1 0 1 1 0 0 18 1 2008.0126 Q9BRD0;H7C462 Q9BRD0 267 284 BUD13 BUD13 homolog yes no 3 0.0045311 57.293 By MS/MS By matching 1 1 8075300 3810200 4265000 497 2571 556 1260;1261 1159;1160 1160 5191 2 ARLSASTASELSPK QSLPASPRARLSASTA TASELSPKSKARPSSP R A R P K S 3 1 0 0 0 0 1 0 0 0 2 1 0 0 1 4 1 0 0 0 0 0 14 1 1416.7573 Q3KQU3;H0YF21 Q3KQU3 449 462 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.028215 66.606 By matching By MS/MS 1 1 10685000 5804800 4879900 498 2036 557 1262;1263 1161 1161 3979;3980 1 ARLSLVIR LSALARKKARLSLVIR ARLSLVIRSPSLLQSG K A R I R S 1 2 0 0 0 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 8 1 926.60253 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 1300 1307 MYBBP1A Myb-binding protein 1A yes no 2 0.022876 75.416 By MS/MS 1 2616700 2616700 0 499 2570 558 1264 1162 1162 1 ARQSLGTGTLVS QQAIQTVRARQSLGTG LGTGTLVS________ R A R V S - 1 1 0 0 0 1 0 2 0 0 2 0 0 0 0 2 2 0 0 1 0 0 12 1 1188.6463 Q9Y5J5 Q9Y5J5 116 127 PHLDA3 Pleckstrin homology-like domain family A member 3 yes yes 2 0.0046371 81.278 By MS/MS By MS/MS 1 1 4520900 2762800 1758100 500 2930 559 1265;1266 1163;1164 1163 6089 2 ARQSNQDAQDIERASFR HKFQLQMRARQSNQDA DIERASFRSLNLQAES R A R F R S 3 3 1 2 0 3 1 0 0 1 0 0 0 1 0 2 0 0 0 0 0 0 17 2 1990.9569 Q12923 Q12923 873 889 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.01981 49.632 By matching By MS/MS 1 1 21292000 9385200 11906000 501 1885 560 1267;1268 1165 1165 1 ARSPTDDKVK RSQEKIGKARSPTDDK SPTDDKVKIEDKSKSK K A R V K I 1 1 0 2 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 2 1115.5935 Q13523 Q13523 255 264 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 2;3 1.3244E-05 141.73 By MS/MS By MS/MS 2 2 75916000 25332000 50584000 502 1921 561 1269;1270;1271;1272 1166;1167;1168 1166 3703;6799 3 ARSTPSPVLQPR VLPSRAERARSTPSPV PSPVLQPRDPSSTLEK R A R P R D 1 2 0 0 0 1 0 0 0 0 1 0 0 0 3 2 1 0 0 1 0 0 12 1 1307.731 Q8TEK3 Q8TEK3 897 908 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 0.012568 75.02 By MS/MS By matching 1 1 10872000 5242300 5630000 503 2388 562 1273;1274 1169 1169 4772 1 ARTDEVPAGGSRSEAEDEDDEDYVPYVPLR ESEPERKRARTDEVPA YVPYVPLRQRRQLLPG R A R L R Q 3 3 0 5 0 0 5 2 0 0 1 0 0 0 3 2 1 0 2 3 0 0 30 2 3336.5018 D6RD33;D6RGI7;J3KNN5;Q9UJV9 D6RD33 11 40 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 3 5.5625E-10 77.322 By MS/MS By MS/MS 2 2 76838000 38400000 38437000 504 668 563;564 1275;1276;1277;1278 1170;1171 1171 1194;1195 2 ARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK GGPGGSGRARTSSFAE PGGTGGGKASVGAMGG R A R G K A 3 1 0 0 0 0 1 18 0 0 0 1 0 1 3 4 2 0 0 0 0 0 34 1 2659.1971 P49840 P49840 17 50 GSK3A Glycogen synthase kinase-3 alpha yes yes 3 5.8642E-13 80.85 By matching By MS/MS 1 1 56897000 28913000 27983000 505 1732 565 1279;1280 1172 1172 3278;3279;6722 1 ARVGGSDEEASGIPSR KSLEGMKKARVGGSDE EASGIPSRTASLELGE K A R S R T 2 2 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 16 1 1586.7649 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53 301 316 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2 0.00029977 89.846 By matching By MS/MS 1 1 56619000 29622000 26997000 506 255 566 1281;1282 1173 1173 462 1 ARVVNTDHGSPEQLQIPVTDSGR KFPSGSQRARVVNTDH IPVTDSGRHILEDSCA R A R G R H 1 2 1 2 0 2 1 2 1 1 1 0 0 0 2 2 2 0 0 3 0 0 23 1 2475.2466 Q6IQ49 Q6IQ49 269 291 SDE2 Protein SDE2 homolog yes yes 3 0.024991 40.319 By MS/MS By matching 1 1 10409000 5550800 4858500 507 2146 567 1283;1284 1174 1174 6900 1 ARYDSGGVSNGDCSLGVSGDEAR GGRLGHGRARYDSGGV GVSGDEARASPTRGPR R A R A R A 2 2 1 3 1 0 1 5 0 0 1 0 0 0 0 4 0 0 1 2 0 0 23 1 2328.0037 Q9UPR0 Q9UPR0 47 69 PLCL2 Inactive phospholipase C-like protein 2 yes yes 3 0.01792 41.166 By MS/MS By matching 1 1 4710000 2775100 1934800 508 2869 568 1285;1286 1175 1175 7946 1 ASAGTPSLSAGVSPK RRRGRRKRASAGTPSL LSAGVSPKRRALPSVA R A S P K R 3 0 0 0 0 0 0 2 0 0 1 1 0 0 2 4 1 0 0 1 0 0 15 0 1328.6936 Q8TEK3 Q8TEK3 1092 1106 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 1.0712E-23 153.41 By MS/MS By MS/MS 1 1 28968000 17051000 11916000 509 2388 569 1287;1288 1176;1177 1176 4773 2 ASALLFSSDEEDQWNIPASQTHLASDSR ASELSKKKASALLFSS THLASDSRSKGEPRDS K A S S R S 4 1 1 3 0 2 2 0 1 1 3 0 0 1 1 6 1 1 0 0 0 0 28 0 3074.4217 A0A0A0MR88;A0A096LPC5;F8W7U3;E7ESD2;Q641Q2;A0A087WYF6 F8W7U3 525 552 FAM21C;FAM21A WASH complex subunit FAM21A no no 3 6.1428E-05 65.811 By MS/MS By MS/MS 2 2 67519000 45688000 21831000 510 729;158 570;571 1289;1290;1291;1292 1178;1179;1180;1181 1180 279;280;281;6261 4 ASAPSPNAQVACDHCLK DVWTPPARASAPSPNA VACDHCLKEAAVKTCL R A S L K E 4 0 1 1 2 1 0 0 1 0 1 1 0 0 2 2 0 0 0 1 0 0 17 0 1824.8247 Q14258 Q14258 96 112 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.0019382 65.298 By matching By MS/MS 1 1 15340000 7242000 8097700 511 1946 572 1293;1294 1182 1182 3754 1 ASAQSSVR FGPGDQVRASAQSSVR ASAQSSVRSNDSGIQQ R A S V R S 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 0 1 0 0 8 0 804.40898 A0A087X1H5;Q15057 A0A087X1H5 551 558 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 2 0.024286 81.381 By MS/MS By MS/MS 2 2 101770000 49122000 52645000 512 139 573;574 1295;1296;1297;1298 1183;1184 1183 1 ASAVSELSPR YGTGSASRASAVSELS AVSELSPRERSPALKS R A S P R E 2 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1015.5298 Q9Y2W1 Q9Y2W1 236 245 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 1.2389E-20 176.05 By MS/MS By MS/MS 1 1 591370000 343760000 247610000 513 2897 575 1299;1300 1185;1186;1187;1188 1188 6030 4 ASDPGLPAEEPK HLPPRIHRASDPGLPA GLPAEEPKEKSSRKVA R A S P K E 2 0 0 1 0 0 2 1 0 0 1 1 0 0 3 1 0 0 0 0 0 0 12 0 1209.5877 F8VPD4;P27708 F8VPD4 1795 1806 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 2 0.014107 64.534 By MS/MS By matching 1 1 18313000 8680700 9632800 514 910 576 1301;1302 1189 1189 1629 1 ASDPGLPAEEPKEK HLPPRIHRASDPGLPA PAEEPKEKSSRKVAEP R A S E K S 2 0 0 1 0 0 3 1 0 0 1 2 0 0 3 1 0 0 0 0 0 0 14 1 1466.7253 F8VPD4;P27708 F8VPD4 1795 1808 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 2 0.024801 57.328 By MS/MS By matching 1 1 13495000 6266200 7229000 515 910 577 1303;1304 1190 1190 1629 1 ASDPQSPPQVSR EEGDPRTRASDPQSPP QSPPQVSRHKSHYRNR R A S S R H 1 1 0 1 0 2 0 0 0 0 0 0 0 0 3 3 0 0 0 1 0 0 12 0 1267.6157 Q7L7X3 Q7L7X3 416 427 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 2 0.0027471 86.548 By MS/MS By MS/MS 1 1 18170000 9779500 8390200 516 2201 578 1305;1306 1191;1192;1193 1193 4384;4385 3 ASEDTTSGSPPK KVEIGQKRASEDTTSG TTSGSPPKKSSAGPKR R A S P K K 1 0 0 1 0 0 1 1 0 0 0 1 0 0 2 3 2 0 0 0 0 0 12 0 1175.5306 H0YER7;G3V1C3;Q9BZZ5 H0YER7 271 282 API5 Apoptosis inhibitor 5 yes no 2 0.0099235 92.295 By MS/MS By MS/MS 1 2 6046800 1567900 4478900 517 959 579 1307;1308;1309 1194;1195;1196 1194 1743;1744 0 ASEDTTSGSPPKK KVEIGQKRASEDTTSG TSGSPPKKSSAGPKRD R A S K K S 1 0 0 1 0 0 1 1 0 0 0 2 0 0 2 3 2 0 0 0 0 0 13 1 1303.6256 H0YER7;G3V1C3;Q9BZZ5 H0YER7 271 283 API5 Apoptosis inhibitor 5 yes no 2;3 5.0235E-12 153 By MS/MS By MS/MS 2 2 608730000 323360000 285370000 518 959 580 1310;1311;1312;1313 1197;1198;1199;1200;1201 1200 1743;1744 5 ASEDTTSGSPPKKSSAGPK KVEIGQKRASEDTTSG KKSSAGPKRDARQ___ R A S P K R 2 0 0 1 0 0 1 2 0 0 0 3 0 0 3 5 2 0 0 0 0 0 19 2 1830.8959 H0YER7;G3V1C3;Q9BZZ5 H0YER7 271 289 API5 Apoptosis inhibitor 5 yes no 3 7.8056E-28 138.81 By MS/MS By MS/MS 1 2 88930000 45170000 43761000 519 959 581 1314;1315;1316 1202;1203 1202 1743;1744;1745 2 ASEIDQVVPAAQSSPINCEKR EEKASEYRASEIDQVV SPINCEKRENLLPFVG R A S K R E 3 1 1 1 1 2 2 0 0 2 0 1 0 0 2 3 0 0 0 2 0 0 21 1 2298.1274 O94782;C9JWX4;C9JC88 O94782 54 74 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes no 3 0.014797 41.115 By MS/MS By matching 1 1 13294000 12544000 749270 520 1461 582 1317;1318 1204 1204 2701;2702 1 ASENGHYELEHLSTPK MKEKLTHKASENGHYE LEHLSTPKLKGSSHSP K A S P K L 1 0 1 0 0 0 3 1 2 0 2 1 0 0 1 2 1 0 1 0 0 0 16 0 1810.8486 O95149 O95149 328 343 SNUPN Snurportin-1 yes yes 3 7.9055E-05 89.624 By MS/MS By MS/MS 1 1 6637500 3512200 3125300 521 1474 583 1319;1320 1205;1206;1207 1206 7539 3 ASEPLLSPPPFGESR SPGVGGGKASEPLLSP PPPFGESRKALEVKKE K A S S R K 1 1 0 0 0 0 2 1 0 0 2 0 0 1 4 3 0 0 0 0 0 0 15 0 1582.7991 O14686 O14686 2268 2282 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.028588 51.727 By matching By MS/MS 1 1 12835000 7433700 5401000 522 1344 584 1321;1322 1208 1208 1 ASFDHSPDSLPLR PRGRTKKKASFDHSPD SPDSLPLRSSGRQAKK K A S L R S 1 1 0 2 0 0 0 0 1 0 2 0 0 1 2 3 0 0 0 0 0 0 13 0 1440.6997 Q8NB78 Q8NB78 12 24 KDM1B Lysine-specific histone demethylase 1B yes yes 2;3 9.4658E-05 111.66 By MS/MS By MS/MS 2 2 21479000 11328000 10151000 523 2332 585 1323;1324;1325;1326 1209;1210;1211 1211 4670 3 ASGDPGASGMSPR GGGGRGGKASGDPGAS GASGMSPRASPLPPPP K A S P R A 2 1 0 1 0 0 0 3 0 0 0 0 1 0 2 3 0 0 0 0 0 0 13 0 1188.5193 Q8NDT2 Q8NDT2 99 111 RBM15B Putative RNA-binding protein 15B yes yes 2 5.8901E-30 181.75 By MS/MS By MS/MS 1 1 14155000 6689900 7465400 524 2345 586 1327;1328 1212;1213;1214;1215 1214 4702 4 ASGKTSQVGAASAPAKESPR AKALLQAKASGKTSQV APAKESPRKGAAPAPP K A S P R K 5 1 0 0 0 1 1 2 0 0 0 2 0 0 2 4 1 0 0 1 0 0 20 2 1898.981 Q13428;J3KQ96;E7ETY2 Q13428 364 383 TCOF1 Treacle protein yes no 3 5.3197E-26 136.37 By MS/MS By MS/MS 1 1 33373000 20705000 12667000 525 1915 587 1329;1330 1216;1217 1216 3676 2 ASGPPVSELITK SAGAAKRKASGPPVSE PVSELITKAVAASKER K A S T K A 1 0 0 0 0 0 1 1 0 1 1 1 0 0 2 2 1 0 0 1 0 0 12 0 1197.6605 P16402;P16403;P10412 P10412 35 46 HIST1H1D;HIST1H1C;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.4 no no 2 0.024609 64.64 By MS/MS By matching 1 1 28313000 14000000 14313000 526 1556;1586 588 1331;1332 1218 1218 1 ASGQAFELILSPR QVKELEKRASGQAFEL FELILSPRSKESVPEF R A S P R S 2 1 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 13 0 1387.746 A2A2D0;P16949 A2A2D0 15 27 STMN1 Stathmin yes no 2;3 8.5702E-163 250.52 By MS/MS By MS/MS 12 11 1286900000 784810000 502100000 527 393 589;590 1333;1334;1335;1336;1337;1338;1339;1340;1341;1342;1343;1344;1345;1346;1347;1348;1349;1350;1351;1352;1353;1354;1355 1219;1220;1221;1222;1223;1224;1225;1226;1227;1228;1229;1230;1231;1232;1233;1234;1235;1236;1237;1238;1239;1240;1241;1242;1243;1244;1245;1246;1247;1248;1249;1250;1251;1252;1253;1254;1255;1256;1257;1258 1223 752;753 39 ASGQAFELILSPRSK QVKELEKRASGQAFEL LILSPRSKESVPEFPL R A S S K E 2 1 0 0 0 1 1 1 0 1 2 1 0 1 1 3 0 0 0 0 0 0 15 1 1602.873 A2A2D0;P16949 A2A2D0 15 29 STMN1 Stathmin yes no 2;3 0.00015839 95.954 By MS/MS By MS/MS 2 2 27388000 14381000 13007000 528 393 591 1356;1357;1358;1359 1259;1260;1261;1262 1262 752;753;754 4 ASGSLSPPILAPLSPGAEISPHDLSLESCR HFEAEVARASGSLSPP DLSLESCRVGGPLAVL R A S C R V 3 1 0 1 1 0 2 2 1 2 5 0 0 0 5 7 0 0 0 0 0 0 30 0 3057.5441 Q9NRF2 Q9NRF2 83 112 SH2B1 SH2B adapter protein 1 yes yes 3 1.1901E-22 96.923 By MS/MS By matching 1 1 39135000 30881000 8254000 529 2720 592 1360;1361 1263 1263 5556;5557 1 ASGVAVSDGVIK ________________ AVSDGVIKVFNDMKVR M A S I K V 2 0 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 0 0 3 0 0 12 0 1101.603 P23528;E9PP50;E9PS23 P23528 2 13 CFL1 Cofilin-1 yes no 2 0.0010789 101.45 By MS/MS By MS/MS 1 1 23514000 12815000 10699000 530 1625 593 1362;1363 1264;1265 1265 3002 2 ASIGQSPGLPSTTFK VSSTSASKASIGQSPG GLPSTTFKLPSNSLGF K A S F K L 1 0 0 0 0 1 0 2 0 1 1 1 0 1 2 3 2 0 0 0 0 0 15 0 1489.7777 Q5VT52 Q5VT52 609 623 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 0.0022633 73.833 By MS/MS By matching 1 1 10585000 5891900 4693100 531 2115 594 1364;1365 1266;1267 1266 4188 2 ASLEDAPVDDLTR SPDQISHRASLEDAPV APVDDLTRKFTYLGSQ R A S T R K 2 1 0 3 0 0 1 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 13 0 1400.6783 C9J6P4;Q7Z2W4 C9J6P4 283 295 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 8.9014E-08 127.78 By MS/MS By MS/MS 1 1 10941000 5257900 5682900 532 565 595 1366;1367 1268;1269 1269 1037 2 ASLGSLEGEAEAEASSPK KGDLKSSKASLGSLEG EAEASSPKGKFSLFKS K A S P K G 4 0 0 0 0 0 4 2 0 0 2 1 0 0 1 4 0 0 0 0 0 0 18 0 1731.8163 Q09666 Q09666 5748 5765 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 2.3719E-32 148.97 By MS/MS By matching 1 1 19831000 13005000 6825400 533 1871 596 1368;1369 1270;1271 1270 3529;3530;3531 2 ASLGSLEGEAEAEASSPKGK KGDLKSSKASLGSLEG EASSPKGKFSLFKSKK K A S G K F 4 0 0 0 0 0 4 3 0 0 2 2 0 0 1 4 0 0 0 0 0 0 20 1 1916.9327 Q09666 Q09666 5748 5767 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 3 2.903E-06 84.493 By MS/MS By MS/MS 2 2 14452000 8094900 6356800 534 1871 597;598 1370;1371;1372;1373 1272;1273;1274 1272 3529;3530;3531 3 ASLLHSMPTHSSPR SQTALDNKASLLHSMP MPTHSSPRSRDYNPYN K A S P R S 1 1 0 0 0 0 0 0 2 0 2 0 1 0 2 4 1 0 0 0 0 0 14 0 1519.7565 E3W994;J3KR49;O75122;E7ERI8;E7EW49;A0A0U1RQI6;H7C4X8 E3W994 981 994 CLASP2 CLIP-associating protein 2 yes no 2 0.0051858 67.136 By MS/MS By matching 1 1 6499200 3798700 2700500 535 690 599 1374;1375 1275 1275 1217 1 ASLSSAPVVLVGDHA KLAQRRQRASLSSAPV VVLVGDHA________ R A S H A - 3 0 0 1 0 0 0 1 1 0 2 0 0 0 1 3 0 0 0 3 0 0 15 0 1421.7514 Q9HBH9 Q9HBH9 451 465 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 yes yes 2 0.00047797 88.163 By MS/MS By MS/MS 1 1 3873200 2216500 1656700 536 2689 600 1376;1377 1276;1277 1277 5481;5482;5483 2 ASLVALPEQTASEEETPPPLLTK RLTEDRKKASLVALPE TPPPLLTKEASSPPPH K A S T K E 3 0 0 0 0 1 4 0 0 0 4 1 0 0 4 2 3 0 0 1 0 0 23 0 2420.2686 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 341 363 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 0.0087177 51.073 By MS/MS By MS/MS 2 2 30975000 17960000 13014000 537 725 601 1378;1379;1380;1381 1278;1279 1278 1292 2 ASMSEFLESEDGEVEQQR VCRPKRTKASMSEFLE DGEVEQQRTYSSGHNR K A S Q R T 1 1 0 1 0 2 5 1 0 0 1 0 1 1 0 3 0 0 0 1 0 0 18 0 2069.8848 J3QQW9;Q15022 J3QQW9 515 532 SUZ12 Polycomb protein SUZ12 yes no 2;3 3.0275E-32 147.09 By MS/MS By MS/MS 3 4 171270000 86332000 84933000 538 1253 602;603 1382;1383;1384;1385;1386;1387;1388 1280;1281;1282;1283;1284;1285 1280 142 2268 6 ASNTSTPTKGNTETSASASQTNHVK EAAAKAAKASNTSTPT ASQTNHVKDVKKIKIE K A S V K D 3 0 3 0 0 1 1 1 1 0 0 2 0 0 1 5 6 0 0 1 0 0 25 1 2518.1896 Q14004 Q14004 489 513 CDK13 Cyclin-dependent kinase 13 yes yes 3 1.7351E-06 79.94 By MS/MS By matching 1 1 9966000 7569200 2396900 539 1936 604 1389;1390 1286;1287 1287 6807 2 ASPAPGSGHPEGPGAHLDMNSLDR ERKTPEGRASPAPGSG LDMNSLDRAQAAKNKG R A S D R A 3 1 1 2 0 0 1 4 2 0 2 0 1 0 4 3 0 0 0 0 0 0 24 0 2369.0819 O94826 O94826 90 113 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 3;4 3.0758E-06 80.236 By MS/MS 2 133230000 0 133230000 540 1465 605 1391;1392 1288;1289 1288 2717 2 ASPDSRHSPATISSSTR RDSGRLDKASPDSRHS ATISSSTRGLGAEERR K A S T R G 2 2 0 1 0 0 0 0 1 1 0 0 0 0 2 6 2 0 0 0 0 0 17 1 1755.85 O15119 O15119 431 447 TBX3 T-box transcription factor TBX3 yes yes 3 0.0095315 51.798 By matching By MS/MS 1 1 7852600 2992900 4859800 541 1359 606 1393;1394 1290 1290 2483 1 ASPEPQRENASPAPGTTAEEAMSR MEVQGAERASPEPQRE TAEEAMSRGPPPAPEG R A S S R G 5 2 1 0 0 1 4 1 0 0 0 0 1 0 4 3 2 0 0 0 0 0 24 1 2483.1347 A0A024RCR6;A0A0G2JK23;P46379;A0A0G2JL47;H0Y710 A0A024RCR6 957 980 BAT3;BAG6 Large proline-rich protein BAG6 yes no 3 0.013539 44.863 By matching By MS/MS 1 1 18572000 11084000 7487400 542 4 607 1395;1396 1291 1291 5;6 1 ASPFSVESLLSDSPPR RGAAGLPKASPFSVES LLSDSPPRRKAASNAA K A S P R R 1 1 0 1 0 0 1 0 0 0 2 0 0 1 3 5 0 0 0 1 0 0 16 0 1687.8417 A6NJT0 A6NJT0 329 344 UNCX Homeobox protein unc-4 homolog yes yes 2;3 5.4429E-46 181.86 By MS/MS By MS/MS 2 1 42025000 27250000 14775000 543 419 608 1397;1398;1399 1292;1293;1294 1292 786;787 3 ASPITNDGEDEFVPSDGLDKDEYTFSPGK DLEELKVKASPITNDG EYTFSPGKSKATPEKS K A S G K S 1 0 1 5 0 0 3 3 0 1 1 2 0 2 3 3 2 0 1 1 0 0 29 1 3129.3938 Q02880 Q02880 1399 1427 TOP2B DNA topoisomerase 2-beta yes yes 3 0.0024411 49.709 By MS/MS By MS/MS 2 2 113810000 57674000 56131000 544 1842 609;610 1400;1401;1402;1403 1295;1296;1297 1296 3445 3 ASPPPQGPLPGPPGALHR GVVGARPRASPPPQGP GPPGALHRWALAVPPG R A S H R W 2 1 0 0 0 1 0 3 1 0 2 0 0 0 7 1 0 0 0 0 0 0 18 0 1744.9373 A0A087WXV6;Q96G74 A0A087WXV6 39 56 OTUD5 OTU domain-containing protein 5 yes no 3 0.012208 48.896 By MS/MS By MS/MS 1 1 30925000 16970000 13955000 545 90 611 1404;1405 1298;1299 1298 168 2 ASPSPQPSSQPLQIHR NDQSPQIRASPSPQPS SQPLQIHRQTPESKNA R A S H R Q 1 1 0 0 0 3 0 0 1 1 1 0 0 0 4 4 0 0 0 0 0 0 16 0 1728.8907 B5MBZ0;Q9HC35 B5MBZ0 143 158 EML4 Echinoderm microtubule-associated protein-like 4 yes no 2;3 8.2089E-05 93.716 By MS/MS By MS/MS 2 2 35168000 20481000 14687000 546 501 612 1406;1407;1408;1409 1300;1301;1302 1302 940;941 3 ASQSAGDINTIYQPPEPR VSRQVRIKASQSAGDI IYQPPEPRSRHLSVSS K A S P R S 2 1 1 1 0 2 1 1 0 2 0 0 0 0 3 2 1 0 1 0 0 0 18 0 1942.9385 J3KRN4;J3QRB6;Q99759 J3KRN4 144 161 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 2 0.0096076 52.527 By MS/MS By matching 1 1 6513600 3552100 2961500 547 1240 613 1410;1411 1303 1303 2246;7477 1 ASREDSGLFSPIR PDSPRPVKASREDSGL SGLFSPIRSSAFSPLG K A S I R S 1 2 0 1 0 0 1 1 0 1 1 0 0 1 1 3 0 0 0 0 0 0 13 1 1433.7263 Q9UKA4 Q9UKA4 439 451 AKAP11 A-kinase anchor protein 11 yes yes 3 0.016123 59.345 By MS/MS 1 0 0 0 548 2827 614 1412 1304 1304 5816 1 ASRVPSSDEEVVEEPQSR FQDSTEPRASRVPSSD VVEEPQSRRTRMSLGT R A S S R R 1 2 0 1 0 1 4 0 0 0 0 0 0 0 2 4 0 0 0 3 0 0 18 1 1999.9447 Q9C0C2 Q9C0C2 1615 1632 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2;3 1.6056E-05 102.37 By MS/MS By MS/MS 2 2 121500000 76977000 44528000 549 2615 615 1413;1414;1415;1416 1305;1306;1307;1308;1309 1307 5293;5294 5 ASSASVPAVGASAEGTR RQEPLRRRASSASVPA GASAEGTRRDRLGSYS R A S T R R 5 1 0 0 0 0 1 2 0 0 0 0 0 0 1 4 1 0 0 2 0 0 17 0 1516.7481 V9GYZ0;Q9BZ23 V9GYZ0 44 60 PANK2 Pantothenate kinase 2, mitochondrial yes no 2 0.014561 55.011 By MS/MS 1 4834000 0 4834000 550 2607 616 1417 1310 1310 5277 1 ASSDLPSPLEK GVKGPQDRASSDLPSP DLPSPLEKADSESNKG R A S E K A 1 0 0 1 0 0 1 0 0 0 2 1 0 0 2 3 0 0 0 0 0 0 11 0 1142.5819 Q9H161 Q9H161 194 204 ALX4 Homeobox protein aristaless-like 4 yes yes 2 0.0029457 86.803 By MS/MS By MS/MS 1 1 4578100 2244100 2334000 551 2633 617 1418;1419 1311;1312 1311 5355 2 ASSFADMMGILK DDCVSLSKASSFADMM ADMMGILKDFHRMKQS K A S L K D 2 0 0 1 0 0 0 1 0 1 1 1 2 1 0 2 0 0 0 0 0 0 12 0 1269.6097 E9PPF9;E9PLD2;Q9H019 E9PPF9 139 150 MTFR1L Mitochondrial fission regulator 1-like yes no 2 2.7865E-05 119.25 By MS/MS By MS/MS 1 1 26210000 14429000 11780000 552 821 618 1420;1421 1313;1314 1314 1467 2 ASSFSGISILTR SMRPPVTKASSFSGIS SGISILTRGDSIGSSK K A S T R G 1 1 0 0 0 0 0 1 0 2 1 0 0 1 0 4 1 0 0 0 0 0 12 0 1237.6667 H7C0E9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H0YIX9 H7C0E9 112 123 R3HDM2 R3H domain-containing protein 2 yes no 2 0.0039712 78.287 By MS/MS By MS/MS 1 1 26535000 15616000 10919000 553 350 619 1422;1423 1315;1316 1316 643 2 ASSFSGISVLTR NLKPAVTKASSFSGIS SGISVLTRGDSSGSSK K A S T R G 1 1 0 0 0 0 0 1 0 1 1 0 0 1 0 4 1 0 0 1 0 0 12 0 1223.651 H7C207;Q15032;H7C1X4;H7BZ47 H7C207 68 79 R3HDM1 R3H domain-containing protein 1 yes no 2 0.0025075 88.101 By MS/MS By MS/MS 1 1 30436000 19299000 11137000 554 1172 620 1424;1425 1317;1318 1317 2131 2 ASSHSSQTQGGGSVTK TSQRSRGRASSHSSQT QGGGSVTKKRKLESTE R A S T K K 1 0 0 0 0 2 0 3 1 0 0 1 0 0 0 5 2 0 0 1 0 0 16 0 1517.707 Q3BDU5;P02545;A0A0C4DGC5;Q5TCI8 Q3BDU5 402 417 LMNA Prelamin-A/C;Lamin-A/C yes no 2;3 1.131E-09 123.76 By MS/MS By MS/MS 2 2 152650000 79107000 73548000 555 1517 621 1426;1427;1428;1429 1319;1320;1321;1322 1319 2799;2800;2801;2802 4 ASSHSSQTQGGGSVTKK TSQRSRGRASSHSSQT GGGSVTKKRKLESTES R A S K K R 1 0 0 0 0 2 0 3 1 0 0 2 0 0 0 5 2 0 0 1 0 0 17 1 1645.802 Q3BDU5;P02545;A0A0C4DGC5;Q5TCI8 Q3BDU5 402 418 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0017661 61.821 By MS/MS By MS/MS 1 1 12437000 4743500 7693800 556 1517 622 1430;1431 1323;1324 1323 2799;2800;2801;2802 2 ASSHSSQTQGGGSVTKKR TSQRSRGRASSHSSQT GGSVTKKRKLESTESR R A S K R K 1 1 0 0 0 2 0 3 1 0 0 2 0 0 0 5 2 0 0 1 0 0 18 2 1801.9031 Q3BDU5;P02545;A0A0C4DGC5;Q5TCI8 Q3BDU5 402 419 LMNA Prelamin-A/C;Lamin-A/C yes no 3;4 0.0025389 57.197 By MS/MS By MS/MS 2 1 14844000 9327700 5515800 557 1517 623 1432;1433;1434 1325;1326 1325 2799;2800;2801;2802 2 ASSLEDLVLK PCSAPLARASSLEDLV SLEDLVLKEASTAVST R A S L K E 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 10 0 1073.5968 Q15477 Q15477 254 263 SKIV2L Helicase SKI2W yes yes 2 2.5183E-05 133.42 By MS/MS By MS/MS 1 1 180180000 88564000 91612000 558 1993 624 1435;1436 1327;1328 1328 3890 2 ASSLGEIDESSELR EPPPAPPRASSLGEID IDESSELRVLDIPGQD R A S L R V 1 1 0 1 0 0 3 1 0 1 2 0 0 0 0 4 0 0 0 0 0 0 14 0 1491.7053 Q16513 Q16513 581 594 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.00024847 109.83 By MS/MS By MS/MS 1 1 186050000 92984000 93065000 559 2016 625 1437;1438 1329;1330 1330 3933;3934 2 ASSLNENVDHSALLK GVRLSLPRASSLNENV VDHSALLKLGTSVSER R A S L K L 2 0 2 1 0 0 1 0 1 0 3 1 0 0 0 3 0 0 0 1 0 0 15 0 1596.8107 D3DTX6;Q96SB3 D3DTX6 98 112 PPP1R9B Neurabin-2 yes no 2;3 3.6935E-06 116.87 By MS/MS By MS/MS 2 2 70235000 40312000 29924000 560 639 626 1439;1440;1441;1442 1331;1332;1333;1334;1335 1335 1158;1159 5 ASSLNFLNK PPNPRMKRASSLNFLN SSLNFLNKSVEEPTQP R A S N K S 1 0 2 0 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 9 0 992.5291 Q9H0B6;A8MZ87 Q9H0B6 580 588 KLC2 Kinesin light chain 2 yes no 2 0.0017732 133.99 By MS/MS By MS/MS 1 1 150520000 91003000 59520000 561 2625 627 1443;1444 1336;1337 1337 5327 2 ASSLNVLNVGGK PKNPGMKRASSLNVLN NVLNVGGKAAEDRFQE R A S G K A 1 0 2 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 2 0 0 12 0 1157.6404 H0YG16;G3V5R9;H0YJK1 H0YG16 229 240 KLC1 yes no 2 5.6052E-05 117.95 By MS/MS By MS/MS 1 1 170220000 93336000 76888000 562 1071 628 1445;1446 1338;1339 1339 1979;1980 2 ASSLNVLNVGGKAAEDRFQER PKNPGMKRASSLNVLN AEDRFQERNNCLADSR R A S E R N 3 2 2 1 0 1 2 2 0 0 2 1 0 1 0 2 0 0 0 2 0 0 21 2 2260.156 H0YG16;H0YJK1 H0YG16 229 249 KLC1 yes no 3 0.0082144 52.061 By matching By MS/MS 1 1 5792900 3168200 2624700 563 1071 629 1447;1448 1340 1340 1979;1980 1 ASSLPGSLQR RVSAGSSKASSLPGSL SLPGSLQRSRSDIDVN K A S Q R S 1 1 0 0 0 1 0 1 0 0 2 0 0 0 1 3 0 0 0 0 0 0 10 0 1014.5458 E3W994;J3KR49;O75122;E7ERI8;E7EW49;A0A0U1RQI6;B3KR06;E7ENG2 E3W994 358 367 CLASP2 CLIP-associating protein 2 yes no 2 0.0067357 74.962 By MS/MS By MS/MS 1 1 7945900 3957800 3988000 564 690 630 1449;1450 1341;1342;1343 1343 1218 3 ASSLSESSPPK KPLSPDSRASSLSESS LSESSPPKAMKFQAPA R A S P K A 1 0 0 0 0 0 1 0 0 0 1 1 0 0 2 5 0 0 0 0 0 0 11 0 1088.535 F8VS07;F8VQE1;Q9UHB6;F8VRN8 F8VS07 65 75 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.00062612 106.79 By MS/MS By MS/MS 1 1 14260000 7611000 6649100 565 911 631 1451;1452 1344;1345;1346;1347;1348;1349 1349 1631;1632;1633 6 ASSLSESSPPKAMK KPLSPDSRASSLSESS SSPPKAMKFQAPARET R A S M K F 2 0 0 0 0 0 1 0 0 0 1 2 1 0 2 5 0 0 0 0 0 0 14 1 1418.7075 F8VS07;F8VQE1;Q9UHB6;F8VRN8 F8VS07 65 78 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.016549 69.045 By MS/MS By matching 2 2 17467000 9088400 8378300 566 911 632;633 1453;1454;1455;1456 1350;1351 1351 1631;1632;1633 1 ASSPAQCVTPVQTVV RSTSSSERASSPAQCV VTPVQTVV________ R A S V V - 2 0 0 0 1 2 0 0 0 0 0 0 0 0 2 2 2 0 0 4 0 0 15 0 1542.7712 Q13614 Q13614 629 643 MTMR2 Myotubularin-related protein 2 yes yes 2 0.000907 83.087 By MS/MS By MS/MS 1 1 20466000 10092000 10373000 567 1930 634 1457;1458 1352;1353 1353 3725 2 ASSPPDRIDIFGR RRERDRERASSPPDRI DRIDIFGRTVSKRSSL R A S G R T 1 2 0 2 0 0 0 1 0 2 0 0 0 1 2 2 0 0 0 0 0 0 13 1 1429.7314 Q9NWB6 Q9NWB6 75 87 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 2;3 5.5059E-07 122.1 By MS/MS By MS/MS 2 2 463750000 264080000 199670000 568 2743 635 1459;1460;1461;1462 1354;1355;1356;1357 1357 5613;5614 4 ASSPSDIISSK RSEGMRSKASSPSDII PSDIISSKDSVVKGHS K A S S K D 1 0 0 1 0 0 0 0 0 2 0 1 0 0 1 5 0 0 0 0 0 0 11 0 1090.5506 Q9ULD9 Q9ULD9 962 972 ZNF608 Zinc finger protein 608 yes yes 2 0.021489 61.765 By matching By MS/MS 1 1 6102700 4642200 1460500 569 2843 636 1463;1464 1358 1358 1 ASSPSPLTIGTPESQR RSSDLERKASSPSPLT IGTPESQRKPSIILSK K A S Q R K 1 1 0 0 0 1 1 1 0 1 1 0 0 0 3 4 2 0 0 0 0 0 16 0 1626.8213 Q9NPI6 Q9NPI6 521 536 DCP1A mRNA-decapping enzyme 1A yes yes 2 0.0025033 69.451 By MS/MS By MS/MS 1 1 5510100 3292800 2217300 570 2706 637 1465;1466 1359;1360 1359 5516;5517 2 ASSRVSGSFPEDSSKER KEFVARVRASSRVSGS PEDSSKERNLVSWESQ R A S E R N 1 2 0 1 0 0 2 1 0 0 0 1 0 1 1 6 0 0 0 1 0 0 17 2 1824.8602 O15400 O15400 124 140 STX7 Syntaxin-7 yes yes 3 0.0097393 55.621 By MS/MS By matching 1 1 18732000 11352000 7380000 571 1365 638 1467;1468 1361 1361 2494;2495 1 ASSVGVLSPQK SEGSMKVKASSVGVLS VGVLSPQKKSPPTTML K A S Q K K 1 0 0 0 0 1 0 1 0 0 1 1 0 0 1 3 0 0 0 2 0 0 11 0 1071.5924 Q9UGU5 Q9UGU5 490 500 HMGXB4 HMG domain-containing protein 4 yes yes 2 0.0032619 89.189 By MS/MS 1 0 0 0 572 2811 639 1469 1362 1362 5764 1 ASSVGVLSPQKK SEGSMKVKASSVGVLS GVLSPQKKSPPTTMLL K A S K K S 1 0 0 0 0 1 0 1 0 0 1 2 0 0 1 3 0 0 0 2 0 0 12 1 1199.6874 Q9UGU5 Q9UGU5 490 501 HMGXB4 HMG domain-containing protein 4 yes yes 2;3 0.00070711 88.108 By MS/MS By MS/MS 2 2 46520000 21877000 24643000 573 2811 640 1470;1471;1472;1473 1363;1364;1365 1365 5764 3 ASSVSTKESPAR SVKPAQVKASSVSTKE STKESPARKAAPAPGK K A S A R K 2 1 0 0 0 0 1 0 0 0 0 1 0 0 1 4 1 0 0 1 0 0 12 1 1218.6204 Q13428;J3KQ96;E7ETY2 Q13428 225 236 TCOF1 Treacle protein yes no 2;3 0.00060601 108.66 By MS/MS By MS/MS 2 3 94363000 57373000 36990000 574 1915 641 1474;1475;1476;1477;1478 1366;1367;1368;1369 1366 3677 4 ASSVSTKESPARK SVKPAQVKASSVSTKE TKESPARKAAPAPGKV K A S R K A 2 1 0 0 0 0 1 0 0 0 0 2 0 0 1 4 1 0 0 1 0 0 13 2 1346.7154 Q13428;J3KQ96;E7ETY2 Q13428 225 237 TCOF1 Treacle protein yes no 2;3 0.0031337 88.78 By MS/MS By MS/MS 1 2 104800000 37871000 66933000 575 1915 642 1479;1480;1481 1370;1371;1372 1371 3677 3 ASTASPCNNNINAATAVALQEPR PSTTKPSRASTASPCN AVALQEPRKLSYAEVC R A S P R K 6 1 4 0 1 1 1 0 0 1 1 0 0 0 2 2 2 0 0 1 0 0 23 0 2369.1394 Q71RC2 Q71RC2 593 615 LARP4 La-related protein 4 yes yes 3 6.8048E-06 78.319 By MS/MS By matching 1 1 51556000 24274000 27283000 576 2193 643 1482;1483 1373;1374 1374 4366;6925 2 ASTIFLSKSQTDVR SNPSDHPRASTIFLSK SKSQTDVREKRKSNHL R A S V R E 1 1 0 1 0 1 0 0 0 1 1 1 0 1 0 3 2 0 0 1 0 0 14 1 1551.8257 Q8N7R7;H7BZD2;Q8ND76;R4GN48;R4GNF3 Q8N7R7 87 100 CCNYL1;CCNY Cyclin-Y-like protein 1;Cyclin-Y no no 2;3 2.5654E-07 121.95 By MS/MS By MS/MS 1 2 11223000 2982900 8239600 577 2324;2342 644 1484;1485;1486 1375;1376;1377 1377 4663 3 ASTSDYQVISDR RPLATAYKASTSDYQV DYQVISDRQTPKKDES K A S D R Q 1 1 0 2 0 1 0 0 0 1 0 0 0 0 0 3 1 0 1 1 0 0 12 0 1340.6208 Q8NFH5 Q8NFH5 295 306 NUP35 Nucleoporin NUP53 yes yes 2 0.00089619 94.465 By MS/MS By MS/MS 1 1 6427600 3794700 2632900 578 2354 645 1487;1488 1378;1379 1378 7808 2 ASVPAALASPSAR NSGAGPLKASVPAALA ALASPSARVSTIGYLN K A S A R V 5 1 0 0 0 0 0 0 0 0 1 0 0 0 2 3 0 0 0 1 0 0 13 0 1196.6513 I3L0A5;F5H0I3;P35711 I3L0A5 421 433 SOX5 Transcription factor SOX-5 yes no 2 0.0018598 89.624 By matching By MS/MS 1 1 19539000 10498000 9041200 579 872 646 1489;1490 1380 1380 1567 1 ASVSGPNSPSETR NIIDRFQKASVSGPNS PNSPSETRRERAFDAN K A S T R R 1 1 1 0 0 0 1 1 0 0 0 0 0 0 2 4 1 0 0 1 0 0 13 0 1287.6055 C9JZJ7;A0A087X0X0;C9J453;A0A087X255;O15344 C9JZJ7 89 101 MID1 E3 ubiquitin-protein ligase Midline-1 yes no 2 0.019608 74.853 By MS/MS 1 0 0 0 580 134 647 1491 1381 1381 238 1 ASVSPMDEPVPDSESPIEK DAKDENERASVSPMDE DSESPIEKVLSPLRSP R A S E K V 1 0 0 2 0 0 3 0 0 1 0 1 1 0 4 4 0 0 0 2 0 0 19 0 2012.9249 P46821 P46821 1375 1393 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 3.2122E-05 83.758 By MS/MS By MS/MS 2 2 30712000 17581000 13131000 581 1712 648 1492;1493;1494;1495 1382;1383;1384 1384 3169;3170;3171 3 ASYHFSPEELDENTSPLLGDAR VEGTPLPKASYHFSPE SPLLGDARFQKSPPDL K A S A R F 2 1 1 2 0 0 3 1 1 0 3 0 0 1 2 3 1 0 1 0 0 0 22 0 2447.1241 E5RJU4;E5RFM9;H0YAY0;R4GMT7;E7EVI4;E7ET87;O75410 E5RJU4 67 88 TACC1 Transforming acidic coiled-coil-containing protein 1 yes no 3 4.7376E-10 100.67 By MS/MS By MS/MS 1 1 41382000 23127000 18255000 582 692 649 1496;1497 1385;1386 1386 1230 2 ATAGDTHLGGEDFDNR DDGIFEVKATAGDTHL GGEDFDNRLVNHFVEE K A T N R L 2 1 1 3 0 0 1 3 1 0 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1674.7234 P17066;P48741;A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37;Q53FA3;P34931 A0A0G2JIW1 222 237 HSPA6;HSPA7;HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like no no 2;3 0.00019921 85.976 By MS/MS By MS/MS 2 2 22651000 8271200 14380000 583 320;1590 650 1498;1499;1500;1501 1387;1388;1389 1388 2 ATAPQTQHVSPMR EKSSPGHRATAPQTQH TQHVSPMRQVEPPAKK R A T M R Q 2 1 0 0 0 2 0 0 1 0 0 0 1 0 2 1 2 0 0 1 0 0 13 0 1422.7038 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;E9PPR1;E9PL12;E9PK06 E9PL71 100 112 EEF1D Elongation factor 1-delta yes no 2;3 2.8165E-29 179.97 By MS/MS By MS/MS 3 3 1333400000 729840000 603540000 584 143 651;652 1502;1503;1504;1505;1506;1507 1390;1391;1392;1393;1394;1395 1394 16 249 6 ATAVMPDGQFK GHPAPNFKATAVMPDG VMPDGQFKDISLSDYK K A T F K D 2 0 0 1 0 1 0 1 0 0 0 1 1 1 1 0 1 0 0 1 0 0 11 0 1163.5645 A0A0A0MSI0;Q06830 A0A0A0MSI0 17 27 PRDX1 Peroxiredoxin-1 yes no 2 0.0053893 86.136 By MS/MS By MS/MS 1 1 6824600 3434400 3390200 585 214 653 1508;1509 1396;1397 1396 2 ATAVVDGAFK GKPAPDFKATAVVDGA AVVDGAFKEVKLSDYK K A T F K E 3 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 977.5182 P32119;A6NIW5 P32119 17 26 PRDX2 Peroxiredoxin-2 yes no 2 0.0054549 84.213 By MS/MS By MS/MS 1 1 3633900 1917100 1716800 586 1664 654 1510;1511 1398;1399 1399 2 ATDIPASASPPPVAGVPFFK QGSGSSPKATDIPASA VAGVPFFKQSPGHQSP K A T F K Q 4 0 0 1 0 0 0 1 0 1 0 1 0 2 5 2 1 0 0 2 0 0 20 0 1968.0357 Q8N1G0;F8WCX2 Q8N1G0 245 264 ZNF687 Zinc finger protein 687 yes no 2;3 8.531E-08 86.222 By MS/MS By MS/MS 1 2 25747000 11128000 14619000 587 2298 655 1512;1513;1514 1400;1401;1402 1400 4616;4617 3 ATDSDLSSPR DSKGDCQKATDSDLSS DSDLSSPRHKQSPGHQ K A T P R H 1 1 0 2 0 0 0 0 0 0 1 0 0 0 1 3 1 0 0 0 0 0 10 0 1047.4833 Q9BRD0 Q9BRD0 351 360 BUD13 BUD13 homolog yes yes 2 0.0056478 76.165 By MS/MS By MS/MS 1 1 1884200 1884200 0 588 2571 656 1515;1516 1403;1404 1403 5192;5193 2 ATFFAVTYQIPNTQK QGSPVEPKATFFAVTY YQIPNTQKAKGVVLSG K A T Q K A 2 0 1 0 0 2 0 0 0 1 0 1 0 2 1 0 3 0 1 1 0 0 15 0 1727.8883 Q9BY89 Q9BY89 1025 1039 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 1.2503E-15 137.01 By MS/MS By MS/MS 1 1 10154000 5626100 4527500 589 2604 657 1517;1518 1405;1406 1405 7034;7876 2 ATGAALTPTEER LDLSDRHRATGAALTP ALTPTEERRTSFSTSD R A T E R R 3 1 0 0 0 0 2 1 0 0 1 0 0 0 1 0 3 0 0 0 0 0 12 0 1215.6095 M0R300;M0R0P8;Q13459 M0R300 1340 1351 MYO9B Unconventional myosin-IXb yes no 2 4.0848E-08 138.22 By MS/MS By MS/MS 1 1 12814000 7045900 5768600 590 1315 658 1519;1520 1407;1408 1408 6585 2 ATGDETGAKVERADGYEPPVQESV GEGSSSGKATGDETGA EPPVQESV________ K A T S V - 3 1 0 2 0 1 4 3 0 0 0 1 0 0 2 1 2 0 1 3 0 0 24 2 2504.1667 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 204 227 RPS3A 40S ribosomal protein S3a yes no 3 0.014515 40.723 By matching By MS/MS 1 1 11357000 6137400 5219100 591 652 659 1521;1522 1409 1409 1171;7342 1 ATGDGSSPELPSLER QSIRKKRRATGDGSSP PELPSLERKNKRRKIK R A T E R K 1 1 0 1 0 0 2 2 0 0 2 0 0 0 2 3 1 0 0 0 0 0 15 0 1514.7213 Q9H2Y7;A0A0C4DGM5;H3BS99 Q9H2Y7 1020 1034 ZNF106 Zinc finger protein 106 yes no 2 0.0024464 71.933 By MS/MS By matching 1 1 5952400 3458800 2493600 592 2649 660 1523;1524 1410 1410 5399 1 ATGGLCLLGAYADSDDDDNDVSEK TTRPTAVKATGGLCLL DDNDVSEKLAQSKETN K A T E K L 3 0 1 6 1 0 1 3 0 0 3 1 0 0 0 2 1 0 1 1 0 0 24 0 2500.0548 Q8N3X1 Q8N3X1 103 126 FNBP4 Formin-binding protein 4 yes yes 2;3 0.00018219 71.781 By MS/MS By MS/MS 2 2 52623000 25488000 27135000 593 2308 661 1525;1526;1527;1528 1411;1412;1413;1414 1411 4636 4 ATGGLCLLGAYADSDDDDNDVSEKLAQSK TTRPTAVKATGGLCLL SEKLAQSKETNGNQST K A T S K E 4 0 1 6 1 1 1 3 0 0 4 2 0 0 0 3 1 0 1 1 0 0 29 1 3027.3615 Q8N3X1 Q8N3X1 103 131 FNBP4 Formin-binding protein 4 yes yes 3 1.6254E-05 67.285 By MS/MS By MS/MS 1 1 40709000 17868000 22842000 594 2308 662 1529;1530 1415;1416 1415 4636 2 ATGNQPPPLVGTYNTLLSR QPSTSTFKATGNQPPP TYNTLLSRTDSCSSAQ K A T S R T 1 1 2 0 0 1 0 2 0 0 3 0 0 0 3 1 3 0 1 1 0 0 19 0 1998.0534 Q96PD2 Q96PD2 703 721 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 yes yes 2 1.5551E-05 95.428 By MS/MS By MS/MS 1 1 9585400 5895800 3689600 595 2522 663 1531;1532 1417;1418 1417 5096;7009;7010 2 ATISDEEIER LPSASTSKATISDEEI ISDEEIERQLKALGVD K A T E R Q 1 1 0 1 0 0 3 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 10 0 1161.5513 C9J0A7;Q9UQN3 C9J0A7 166 175 CHMP2B Charged multivesicular body protein 2b yes no 2 2.5987E-07 155.47 By MS/MS By MS/MS 1 1 430100000 250640000 179460000 596 548 664 1533;1534 1419;1420 1419 1000 2 ATNESEDEIPQLVPIGK GRGKAQVKATNESEDE PQLVPIGKKTPANEKV K A T G K K 1 0 1 1 0 1 3 1 0 2 1 1 0 0 2 1 1 0 0 1 0 0 17 0 1838.9262 O76021;J3QSV6 O76021 357 373 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2;3 3.0769E-103 216.53 By MS/MS By MS/MS 5 3 1401000000 757470000 643570000 597 1454 665;666 1535;1536;1537;1538;1539;1540;1541;1542 1421;1422;1423;1424;1425;1426;1427;1428;1429;1430 1421 2689;6641 10 ATNESEDEIPQLVPIGKK GRGKAQVKATNESEDE QLVPIGKKTPANEKVE K A T K K T 1 0 1 1 0 1 3 1 0 2 1 2 0 0 2 1 1 0 0 1 0 0 18 1 1967.0211 O76021;J3QSV6 O76021 357 374 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2;3 0.0004198 80.361 By MS/MS By MS/MS 2 2 215750000 110120000 105640000 598 1454 667 1543;1544;1545;1546 1431;1432;1433 1432 2689;6641 3 ATPAQTPRSEDARSSPSQR RRGSRRGRATPAQTPR ARSSPSQRRRGEDSTS R A T Q R R 3 3 0 1 0 2 1 0 0 0 0 0 0 0 3 4 2 0 0 0 0 0 19 2 2040.9937 E5RFR3;P33991;E5RG53 E5RFR3 18 36 MCM4 DNA replication licensing factor MCM4 yes no 3 0.017874 48.623 By matching By MS/MS 1 1 65378000 17278000 48100000 599 693 668 1547;1548 1434 1434 1231;1232 1 ATPATAPGTSPR VPGKRLPRATPATAPG TAPGTSPRANGLSVER R A T P R A 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 1 3 0 0 0 0 0 12 0 1125.5778 H0Y873;Q96P47 H0Y873 20 31 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 2 0.0026956 86.882 By matching By MS/MS 1 1 7009200 3561400 3447800 600 1039 669 1549;1550 1435;1436 1435 1928 2 ATPELGSSENSASSPPR YFTGKIPKATPELGSS NSASSPPRFKTEKMES K A T P R F 2 1 1 0 0 0 2 1 0 0 1 0 0 0 3 5 1 0 0 0 0 0 17 0 1685.7857 Q9BX63 Q9BX63 1019 1035 BRIP1 Fanconi anemia group J protein yes yes 2 0.00098916 74.698 By matching By MS/MS 1 1 9605100 4289300 5315800 601 2595 670 1551;1552 1437 1437 5253 1 ATPPPSPLLSELLKK QKKMLGQKATPPPSPL LLSELLKKGSLLPTSP K A T K K G 1 0 0 0 0 0 1 0 0 0 4 2 0 0 4 2 1 0 0 0 0 0 15 1 1589.9392 H7C128;H7C179;H7C127 H7C128 254 268 BRD8 yes no 3 0.0024062 66.264 By MS/MS By MS/MS 2 2 11026000 5953200 5072400 602 1165 671;672 1553;1554;1555;1556 1438;1439;1440 1440 2114;2115;6546 3 ATPSQLNSPIHQRTSR WTTWWQAKATPSQLNS PIHQRTSRCRQQQSRG K A T S R C 1 2 1 0 0 2 0 0 1 1 1 0 0 0 2 3 2 0 0 0 0 0 16 1 1791.934 K7EJF7 K7EJF7 34 49 TMUB2 yes yes 2 0.0099658 54.764 By matching By MS/MS 1 1 30763000 19246000 11517000 603 1268 673 1557;1558 1441 1441 2299;2300 1 ATQALVLAPTR QQIELDLKATQALVLA ALVLAPTRELAQQIQK K A T T R E 3 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 2 0 0 1 0 0 11 0 1139.6663 P60842;J3QKZ9;J3QLN6;J3KS25;J3QR64;J3KTB5;J3QL43;J3QS69;J3KT12 P60842 100 110 EIF4A1 Eukaryotic initiation factor 4A-I yes no 2 0.015704 71.221 By MS/MS 1 699300 699300 0 604 1786 674 1559 1442 1442 1 ATQCLVKSPEVK FTHTFPPRATQCLVKS LVKSPEVKLMDRGGSQ R A T V K L 1 0 0 0 1 1 1 0 0 0 1 2 0 0 1 1 1 0 0 2 0 0 12 1 1358.7228 O43379 O43379 1116 1127 WDR62 WD repeat-containing protein 62 yes yes 3 0.010807 58.817 By MS/MS By MS/MS 1 1 3947300 2823700 1123500 605 1381 675 1560;1561 1443;1444 1444 2527 2 ATSAAMAAPSSDEAMNLIKNK AEHVVQPKATSAAMAA AMNLIKNKRNMTGYKT K A T N K R 6 0 2 1 0 0 1 0 0 1 1 2 2 0 1 3 1 0 0 0 0 0 21 1 2120.0242 O75626 O75626 533 553 PRDM1 PR domain zinc finger protein 1 yes yes 3 0.013964 41.208 By MS/MS By matching 1 1 6437400 4696600 1740900 606 1445 676 1562;1563 1445 1445 172 2676;2677 1 ATSDTLESPPKIIPK RQTRSKRKATSDTLES SPPKIIPKYISENESP K A T P K Y 1 0 0 1 0 0 1 0 0 2 1 2 0 0 3 2 2 0 0 0 0 0 15 1 1595.877 O94782 O94782 306 320 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 2 9.4662E-06 113.43 By MS/MS By MS/MS 1 1 16883000 7791300 9091900 607 1461 677 1564;1565 1446;1447 1447 2703;6643 2 ATSEEDVSIKSPICEK ENQSHDYKATSEEDVS IKSPICEKQDESNTVI K A T E K Q 1 0 0 1 1 0 3 0 0 2 0 2 0 0 1 3 1 0 0 1 0 0 16 1 1791.856 Q5UIP0 Q5UIP0 1606 1621 RIF1 Telomere-associated protein RIF1 yes yes 2 0.0080689 63.374 By MS/MS By matching 1 1 9841000 5214900 4626000 608 2112 678 1566;1567 1448 1448 4169 1 ATSEVPGSQASPNPVPGDGLHR ARPEIADRATSEVPGS VPGDGLHRAGFDAFMT R A T H R A 2 1 1 1 0 1 1 3 1 0 1 0 0 0 4 3 1 0 0 2 0 0 22 0 2172.056 Q96GM8 Q96GM8 418 439 TOE1 Target of EGR1 protein 1 yes yes 3 0.024038 40.756 By MS/MS By matching 1 1 5489000 2852500 2636600 609 2489 679 1568;1569 1449 1449 1 ATSNVFAMFDQSQIQEFK KTKKRPQRATSNVFAM QSQIQEFKEAFNMIDQ R A T F K E 2 0 1 1 0 3 1 0 0 1 0 1 1 3 0 2 1 0 0 1 0 0 18 0 2089.9779 J3KTJ1;J3QRS3;P19105;P24844;O14950 J3KTJ1 17 34 MYL12A;MYL9;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9;Myosin regulatory light chain 12B yes no 2;3 2.6222E-27 139.88 By MS/MS By MS/MS 2 2 28447000 20981000 7465800 610 1247 680;681 1570;1571;1572;1573 1450;1451;1452;1453;1454 1452 141 2258;6567 5 ATSPEAGGGGGALK SSGFPGARATSPEAGG GGGGGALKASSAPAAA R A T L K A 3 0 0 0 0 0 1 5 0 0 1 1 0 0 1 1 1 0 0 0 0 0 14 0 1171.5833 Q13233 Q13233 19 32 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 yes yes 2 0.010672 79.489 By MS/MS By matching 1 1 4746000 2809400 1936600 611 1905 682 1574;1575 1455 1455 1 ATSPLVSLYPALECR QFSAGADRATSPLVSL LYPALECRALIQQMSP R A T C R A 2 1 0 0 1 0 1 0 0 0 3 0 0 0 2 2 1 0 1 1 0 0 15 0 1675.8603 A0A087WXV6;Q96G74;H7BZQ3 A0A087WXV6 477 491 OTUD5 OTU domain-containing protein 5 yes no 2 0.001378 80.245 By matching By MS/MS 1 1 17121000 9774300 7346700 612 90 683 1576;1577 1456 1456 169 1 ATSPSKSVAHGQAPEMPLVK FADVSPLRATSPSKSV APEMPLVKKKKKKKKG R A T V K K 3 0 0 0 0 1 1 1 1 0 1 2 1 0 3 3 1 0 0 2 0 0 20 1 2034.0568 Q1ED39;H3BMC9 Q1ED39 46 65 KNOP1 Lysine-rich nucleolar protein 1 yes no 3 0.002821 60.735 By MS/MS By MS/MS 1 1 9944500 5327200 4617300 613 2024 684 1578;1579 1457;1458 1457 6848 2 ATSSGRLPLPSPALEYTLGSR SGQDRYDRATSSGRLP LEYTLGSRLANGLGRE R A T S R L 2 2 0 0 0 0 1 2 0 0 4 0 0 0 3 4 2 0 1 0 0 0 21 1 2172.1539 Q8IU81 Q8IU81 115 135 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 3 0.024487 41.292 By MS/MS 1 1915600 1915600 0 614 2260 685 1580 1459 1459 1 ATSSSSGSLSATGR SSRVTVSRATSSSSGS GSLSATGRLGRSKRKR R A T G R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 0 6 2 0 0 0 0 0 14 0 1267.6004 Q03252 Q03252 417 430 LMNB2 Lamin-B2 yes yes 2 8.8544E-08 125.97 By MS/MS By MS/MS 2 2 22737000 13211000 9526000 615 1847 686 1581;1582;1583;1584 1460;1461;1462;1463;1464 1461 3474;3475 5 ATSVALPGWSPSETR ENVPGRSKATSVALPG GWSPSETRSSFMSRTS K A T T R S 2 1 0 0 0 0 1 1 0 0 1 0 0 0 2 3 2 1 0 1 0 0 15 0 1557.7787 Q16513;B1AL79 Q16513 351 365 PKN2 Serine/threonine-protein kinase N2 yes no 2 0.0014763 79.652 By MS/MS By MS/MS 1 1 12842000 7035700 5806300 616 2016 687 1585;1586 1465;1466 1465 3935;6840 2 ATSVALPGWSPSETRSSFMSR ENVPGRSKATSVALPG TRSSFMSRTSKSKSGS K A T S R T 2 2 0 0 0 0 1 1 0 0 1 0 1 1 2 6 2 1 0 1 0 0 21 1 2253.0848 Q16513;B1AL79 Q16513 351 371 PKN2 Serine/threonine-protein kinase N2 yes no 3 0.0050241 53.536 By MS/MS By MS/MS 1 1 66399000 41612000 24788000 617 2016 688 1587;1588 1467;1468 1468 3935;3936;3937;3938;6840 2 ATVTPSPVK KMPKPRLKATVTPSPV TVTPSPVKGKGKVGRP K A T V K G 1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 1 2 0 0 2 0 0 9 0 898.51238 Q9H1E3 Q9H1E3 176 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 4.1773E-24 187.16 By MS/MS By MS/MS 2 2 1334000000 679630000 654330000 618 2637 689;690 1589;1590;1591;1592 1469;1470;1471;1472;1473;1474 1472 5371;7046;7047 6 ATVTPSPVKGK KMPKPRLKATVTPSPV TPSPVKGKGKVGRPTA K A T G K G 1 0 0 0 0 0 0 1 0 0 0 2 0 0 2 1 2 0 0 2 0 0 11 1 1083.6288 Q9H1E3 Q9H1E3 176 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 1;2;3 4.2853E-14 167.22 By MS/MS By MS/MS 5 5 1317600000 684260000 633350000 619 2637 691;692 1593;1594;1595;1596;1597;1598;1599;1600;1601;1602 1475;1476;1477;1478;1479;1480;1481;1482;1483;1484;1485;1486;1487;1488;1489;1490;1491;1492 1479 5371;7046;7047 18 ATVTPSPVKGKGK KMPKPRLKATVTPSPV SPVKGKGKVGRPTASK K A T G K V 1 0 0 0 0 0 0 2 0 0 0 3 0 0 2 1 2 0 0 2 0 0 13 2 1268.7452 Q9H1E3 Q9H1E3 176 188 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.014975 58.159 By MS/MS 1 14402000 14402000 0 620 2637 693 1603 1493 1493 5371;7046;7047 1 ATYINLKPAR NPEAEEMKATYINLKP YINLKPARKYRFH___ K A T A R K 2 1 1 0 0 0 0 0 0 1 1 1 0 0 1 0 1 0 1 0 0 0 10 1 1145.6557 Q9H467 Q9H467 273 282 CUEDC2 CUE domain-containing protein 2 yes yes 2;3 3.1564E-05 120.31 By MS/MS By MS/MS 2 2 10712000 5733100 4979400 621 2659 694 1604;1605;1606;1607 1494;1495;1496 1494 7890 3 AVAGVMITASHNR PYAVQKLKAVAGVMIT MITASHNRKEDNGYKV K A V N R K 3 1 1 0 0 0 0 1 1 1 0 0 1 0 0 1 1 0 0 2 0 0 13 0 1325.6874 Q6PCE3 Q6PCE3 166 178 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 2;3 0.00027111 111.12 By MS/MS By MS/MS 3 3 46197000 26794000 19403000 622 2158 695;696 1608;1609;1610;1611;1612;1613 1497;1498;1499;1500 1498 4298 4 AVANGGTASPEYR LLLGAQRRAVANGGTA GTASPEYRAASPRLRR R A V Y R A 3 1 1 0 0 0 1 2 0 0 0 0 0 0 1 1 1 0 1 1 0 0 13 0 1291.6157 Q96DR7 Q96DR7 90 102 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 0.0088239 83.243 By MS/MS By MS/MS 1 1 0 0 0 623 2474 697 1614;1615 1501;1502 1501 4983 2 AVAQALEVIPR GVEQWPYRAVAQALEV QALEVIPRTLIQNCGA R A V P R T 3 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 2 0 0 11 0 1165.6819 B4DUR8;P49368 B4DUR8 394 404 CCT3 T-complex protein 1 subunit gamma yes no 2 0.023432 58.246 By MS/MS 1 2025800 2025800 0 624 493 698 1616 1503 1503 0 AVASSPAATNSEVK APSEGSPKAVASSPAA AATNSEVKMTSFAERK K A V V K M 4 0 1 0 0 0 1 0 0 0 0 1 0 0 1 3 1 0 0 2 0 0 14 0 1330.6729 Q9P1Y5 Q9P1Y5 550 563 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.021389 67.136 By MS/MS By matching 1 1 5780700 2647200 3133500 625 2778 699 1617;1618 1504 1504 5697 0 AVCSTYLQSR GSASHVSKAVCSTYLQ CSTYLQSRYYRAPEII K A V S R Y 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 2 1 0 1 1 0 0 10 0 1183.5656 H7BXX9;Q5SQL3;J3KP92;Q9H2X6;Q86Z02 H7BXX9 349 358 HIPK2;HIPK1 Homeodomain-interacting protein kinase 2;Homeodomain-interacting protein kinase 1 yes no 2 0.018269 56.81 By matching By MS/MS 1 1 11973000 6459800 5513500 626 1150 700 1619;1620 1505 1505 2094 0 AVDDGVNTFK NLMDDIERAVDDGVNT DDGVNTFKVLTRDKRL R A V F K V 1 0 1 2 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1064.5138 P50990 P50990 391 400 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0017896 106.42 By matching By MS/MS 1 1 4558700 2138400 2420300 627 1741 701 1621;1622 1506 1506 1 AVDGYVKPQIK YYTPVLAKAVDGYVKP GYVKPQIKQVVPEFVN K A V I K Q 1 0 0 1 0 1 0 1 0 1 0 2 0 0 1 0 0 0 1 2 0 0 11 1 1216.6816 K7EM17;K7EK35;P51692;P42229 K7EM17 178 188 STAT5A;STAT5B Signal transducer and activator of transcription;Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription 5A yes no 2 7.0201E-06 122.96 By matching By MS/MS 1 1 15613000 7846300 7767100 628 1272 702 1623;1624 1507 1507 7482 1 AVDITTPK ASNEDVTKAVDITTPK AVDITTPKAARRGRKR K A V P K A 1 0 0 1 0 0 0 0 0 1 0 1 0 0 1 0 2 0 0 1 0 0 8 0 843.47018 O75475 O75475 136 143 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 0.025182 107.45 By MS/MS 1 9513000 0 9513000 629 1440 703 1625 1508 1508 1 AVDKPPSPSPIEMK NGSLCLEKAVDKPPSP SPSPIEMKKASNPVEV K A V M K K 1 0 0 1 0 0 1 0 0 1 0 2 1 0 4 2 0 0 0 1 0 0 14 1 1494.7752 Q9H165;A0A0J9YXG2;A0A0J9YYJ9 Q9H165 80 93 BCL11A B-cell lymphoma/leukemia 11A yes no 2;3 0.00073471 103.66 By MS/MS By matching 3 1 16721000 12631000 4090400 630 2634 704;705 1626;1627;1628;1629 1509;1510;1511;1512 1509 351 5356 3 AVDNILR LYYSQVRKAVDNILRH KAVDNILRHLDKEVGR K A V L R H 1 1 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 7 0 799.4552 A0A0C4DFX2;Q5TBA9 A0A0C4DFX2 562 568 FRY Protein furry homolog yes no 2 0.0002257 116 By MS/MS 1 0 0 0 631 270 706 1630 1513 1513 1 AVDSLVPIGR EPMQTGIKAVDSLVPI DSLVPIGRGQRELIIG K A V G R G 1 1 0 1 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 2 0 0 10 0 1025.5869 P25705;K7ERX7;K7EK77;K7ENJ4 P25705 195 204 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 2 4.185E-05 132.76 By MS/MS By MS/MS 1 1 4571000 2387200 2183800 632 1632 707 1631;1632 1514;1515 1514 2 AVDSSSEEIEVEVPVVDRR QFTQSAEKAVDSSSEE EVPVVDRRNLRRKAKG K A V R R N 1 2 0 2 0 0 4 0 0 1 0 0 0 0 1 3 0 0 0 5 0 0 19 1 2114.0491 D6RB01;Q9Y6X4 D6RB01 572 590 FAM169A Soluble lamin-associated protein of 75 kDa yes no 3 0.00023059 73.834 By MS/MS 1 2577300 2577300 0 633 656 708 1633 1516;1517 1516 1185 2 AVENQYSFY EAAPGRARAVENQYSF VENQYSFY________ R A V F Y - 1 0 1 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 2 1 0 0 9 0 1119.4873 A0A0A0MTI2;O14492 A0A0A0MTI2 667 675 SH2B2 SH2B adapter protein 2 yes no 2 0.0026818 104.21 By MS/MS By MS/MS 1 1 4254000 2211800 2042200 634 247 709 1634;1635 1518;1519 1519 7212 2 AVFPSIVGR FAGDDAPRAVFPSIVG VFPSIVGRPRHQGVMV R A V G R P 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 2 0 0 9 0 944.54435 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8;C9JTX5;C9JUM1;C9JZR7;Q6S8J3;A5A3E0;P0CG38;F8WCH0;P63267;P68133;P68032;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 29 37 ACTG1;ACTB;POTEE;POTEF;POTEI;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 2 0.016482 75.213 By matching By MS/MS 1 1 3490800 1668000 1822800 635 1785;1799 710 1636;1637 1520 1520 1 AVFVDLEPTVIDEVR GAGKHVPRAVFVDLEP PTVIDEVRTGTYRQLF R A V V R T 1 1 0 2 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 4 0 0 15 0 1700.8985 P68363;F5H5D3;Q9BQE3;Q71U36;F8VQQ4;F8VVB9;F8VX09;F8VWV9;F8VRZ4;F8VS66;F8VRK0 P68363 65 79 TUBA1B;TUBA1C;TUBA1A Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain yes no 2;3 3.7953E-120 221.6 By MS/MS By MS/MS 2 2 91704000 54469000 37235000 636 1810 711 1638;1639;1640;1641 1521;1522;1523;1524 1521 4 AVGASFPLYEPAK ESVQTPSKAVGASFPL FPLYEPAKMKTPVQYS K A V A K M 3 0 0 0 0 0 1 1 0 0 1 1 0 1 2 1 0 0 1 1 0 0 13 0 1348.7027 P46013 P46013 332 344 MKI67 Antigen KI-67 yes yes 2 0.0026847 94.409 By MS/MS By MS/MS 1 1 1664800 0 1664800 637 1704 712 1642;1643 1525;1526 1525 7606 2 AVGMPSPVSPK PSPGLGSKAVGMPSPV MPSPVSPKLSPGNSGN K A V P K L 1 0 0 0 0 0 0 1 0 0 0 1 1 0 3 2 0 0 0 2 0 0 11 0 1068.5638 Q9UHB7 Q9UHB7 1050 1060 AFF4 AF4/FMR2 family member 4 yes yes 2 0.0035104 81.525 By MS/MS By MS/MS 3 3 55197000 29517000 25680000 638 2813 713;714;715 1644;1645;1646;1647;1648;1649 1527;1528;1529;1530;1531;1532;1533 1528 366 5769;5770 7 AVIVSSPK SSSKPSIKAVIVSSPK AVIVSSPKAKATVSKT K A V P K A 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 2 0 0 0 2 0 0 8 0 799.48035 Q14966 Q14966 1396 1403 ZNF638 Zinc finger protein 638 yes yes 2 0.0048294 129.85 By MS/MS By MS/MS 1 1 34096000 18635000 15462000 639 1961 716 1650;1651 1534;1535;1536;1537 1534 3811 4 AVIVSSPKAK SSSKPSIKAVIVSSPK IVSSPKAKATVSKTEN K A V A K A 2 0 0 0 0 0 0 0 0 1 0 2 0 0 1 2 0 0 0 2 0 0 10 1 998.61243 Q14966 Q14966 1396 1405 ZNF638 Zinc finger protein 638 yes yes 2 0.0054322 80.737 By MS/MS By MS/MS 1 1 19302000 10101000 9201400 640 1961 717 1652;1653 1538;1539 1539 3811 2 AVKEERSPK PSEDVGSKAVKEERSP VKEERSPKKKEAPSIR K A V P K K 1 1 0 0 0 0 2 0 0 0 0 2 0 0 1 1 0 0 0 1 0 0 9 2 1042.5771 Q8WYP5 Q8WYP5 1990 1998 AHCTF1 Protein ELYS yes yes 3 0.010893 68.132 By matching By MS/MS 1 1 1779200 1290800 488320 641 2417 718 1654;1655 1540 1540 4847 1 AVKSQLYSCY AQCDDSLRAVKSQLYS KSQLYSCY________ R A V C Y - 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 2 0 0 2 1 0 0 10 1 1217.5751 Q9BTX7 Q9BTX7 333 342 TTPAL Alpha-tocopherol transfer protein-like yes yes 2 0.0031764 88.596 By MS/MS By MS/MS 1 1 4168500 1875800 2292700 642 2580 719 1656;1657 1541;1542 1542 5214;7871 2 AVLASQTSLTPLGR LSNLSERRAVLASQTS TSLTPLGRNGRSIPAT R A V G R N 2 1 0 0 0 1 0 1 0 0 3 0 0 0 1 2 2 0 0 1 0 0 14 0 1412.7987 E7EPP7;Q6ZWJ1 E7EPP7 434 447 STXBP4 Syntaxin-binding protein 4 yes no 2 3.8824E-20 160.46 By MS/MS By MS/MS 1 1 16976000 10785000 6190900 643 717 720 1658;1659 1543;1544 1544 1277;6421 2 AVLPVTCHRDSFSR RKIPQLYKAVLPVTCH CHRDSFSRMSLRKMDL K A V S R M 1 2 0 1 1 0 0 0 1 0 1 0 0 1 1 2 1 0 0 2 0 0 14 1 1643.8202 A0A1B0GWE0;Q96N67 Q96N67 2119 2132 DOCK7 Dedicator of cytokinesis protein 7 no no 3 0.0019171 70.784 By MS/MS By MS/MS 1 1 15011000 8338000 6673500 644 2519;381 721 1660;1661 1545;1546 1545 721 2 AVLSDSPQLSEGK HLVEEVARAVLSDSPQ SPQLSEGKEIKLEELI R A V G K E 1 0 0 1 0 1 1 1 0 0 2 1 0 0 1 3 0 0 0 1 0 0 13 0 1329.6776 Q5VY60;Q7Z4H7;Q5SYF9 Q5VY60 411 423 HAUS6 HAUS augmin-like complex subunit 6 yes no 2 9.9849E-11 143.05 By MS/MS By MS/MS 1 1 24669000 13734000 10935000 645 2122 722 1662;1663 1547;1548 1548 4213 2 AVLVDLEPGTMDSVR TGGKYVPRAVLVDLEP PGTMDSVRSGPFGQIF R A V V R S 1 1 0 2 0 0 1 1 0 0 2 0 1 0 1 1 1 0 0 3 0 0 15 0 1600.8131 P68371;Q3ZCM7;P04350;M0R0X0;M0QY85;M0QY37;M0QX14;A0A075B724;M0QZL7;M0R278 P68371 63 77 TUBB4B;TUBB8;TUBB4A Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-4A chain yes no 2 0.0010936 84.821 By MS/MS By MS/MS 1 1 7121600 3930600 3191000 646 1811 723 1664;1665 1549;1550 1550 2 AVLYADYR HEDRPSSRAVLYADYR AVLYADYRAPGPARFD R A V Y R A 2 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 8 0 969.49198 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 433 440 KIRREL Kin of IRRE-like protein 1 yes no 2 0.0054518 85.212 By MS/MS By MS/MS 2 1 17374000 11309000 6065600 647 484 724;725 1666;1667;1668 1551;1552;1553 1551 7287;7288 3 AVLYADYRAPGPAR HEDRPSSRAVLYADYR YRAPGPARFDGRPSSR R A V A R F 4 2 0 1 0 0 0 1 0 0 1 0 0 0 2 0 0 0 2 1 0 0 14 1 1518.7943 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 433 446 KIRREL Kin of IRRE-like protein 1 yes no 2;3 0.0004938 81.709 By MS/MS By MS/MS 1 2 37554000 10284000 27269000 648 484 726 1669;1670;1671 1554;1555;1556 1554 7287;7288 3 AVNTQALSGAGILR LESSELPRAVNTQALS LSGAGILRMVNKAADA R A V L R M 3 1 1 0 0 1 0 2 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1369.7678 O60749 O60749 270 283 SNX2 Sorting nexin-2 yes yes 2 0.004385 69.045 By MS/MS 1 3962800 0 3962800 649 1419 727 1672 1557 1557 2609 1 AVPIAVADEGESESEDDDLKPR PPPSHPLKAVPIAVAD EDDDLKPRGLTGMKNL K A V P R G 3 1 0 4 0 0 4 1 0 1 1 1 0 0 2 2 0 0 0 2 0 0 22 1 2341.0921 Q9Y2K6 Q9Y2K6 121 142 USP20 Ubiquitin carboxyl-terminal hydrolase 20 yes yes 2;3 0.00086026 62.556 By MS/MS By matching 2 2 34229000 16968000 17261000 650 2893 728 1673;1674;1675;1676 1558;1559 1558 6024;6025 2 AVPIGTPPK IIGSPPVRAVPIGTPP VPIGTPPKQMAVPSFT R A V P K Q 1 0 0 0 0 0 0 1 0 1 0 1 0 0 3 0 1 0 0 1 0 0 9 0 878.52255 Q86TB9 Q86TB9 189 197 PATL1 Protein PAT1 homolog 1 yes yes 2 0.015641 91.469 By matching By MS/MS 1 1 25739000 15269000 10469000 651 2229 729 1677;1678 1560 1560 1 AVPMAPAPASPGSSNDSSAR PCEFEHRKAVPMAPAP SSNDSSARSQERAGGL K A V A R S 5 1 1 1 0 0 0 1 0 0 0 0 1 0 4 5 0 0 0 1 0 0 20 0 1868.8687 Q66K74 Q66K74 750 769 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3 2.1827E-14 119.68 By MS/MS By MS/MS 2 2 46494000 27973000 18521000 652 2131 730;731 1679;1680;1681;1682 1561;1562;1563;1564 1563 287 4240 4 AVPPVSPELR TLSPEHWKAVPPVSPE PPVSPELRKPGPPLSP K A V L R K 1 1 0 0 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 0 1063.6026 Q96JM3 Q96JM3 411 420 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0015911 101.93 By MS/MS By MS/MS 2 2 29170000 18302000 10868000 653 2509 732 1683;1684;1685;1686 1565;1566;1567;1568;1569;1570;1571;1572;1573;1574;1575;1576;1577 1576 5047 13 AVPSPTTGEEGSVHSR ENVSEALRAVPSPTTG EEGSVHSREAKESSAA R A V S R E 1 1 0 0 0 0 2 2 1 0 0 0 0 0 2 3 2 0 0 2 0 0 16 0 1609.7696 Q5SYE7 Q5SYE7 1230 1245 NHSL1 NHS-like protein 1 yes yes 3 0.00051825 77.726 By MS/MS By MS/MS 1 1 22630000 13749000 8880800 654 2090 733 1687;1688 1578;1579 1579 4126 2 AVPSSPAGSAAR LAPRPGPRAVPSSPAG SPAGSAARGR______ R A V A R G 4 1 0 0 0 0 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 12 0 1069.5516 F8WBN8;B0QYH1;Q8IWD4 F8WBN8 49 60 CCDC117 Coiled-coil domain-containing protein 117 yes no 2 0.0108 66.708 By MS/MS By MS/MS 1 1 17305000 8807400 8497500 655 448 734 1689;1690 1580;1581 1580 878 2 AVPVESPVQKV RLKQRGKKAVPVESPV VESPVQKV________ K A V K V - 1 0 0 0 0 1 1 0 0 0 0 1 0 0 2 1 0 0 0 4 0 0 11 1 1151.655 Q8TB61 Q8TB61 422 432 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 yes yes 2 0.012383 78.488 By matching By MS/MS 1 1 19400000 10902000 8497800 656 2370 735 1691;1692 1582 1582 4748 0 AVQQHQHGYDSDEEVDSELGTWEHQLR DMQLLWEKAVQQHQHG GTWEHQLRRMEMDKTR K A V L R R 1 1 0 3 0 4 4 2 3 0 2 0 0 0 0 2 1 1 1 2 0 0 27 0 3192.4133 Q8IWZ8 Q8IWZ8 475 501 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 4 3.97E-06 72.99 By MS/MS By MS/MS 1 1 9824900 5375600 4449300 657 2274 736 1693;1694 1583;1584 1584 4569;4570 2 AVSEEQQPALKGK PEKNRINKAVSEEQQP QQPALKGKKGKEEKSK K A V G K K 2 0 0 0 0 2 2 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 13 1 1383.7358 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 165 177 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2 0.0002619 111.83 By MS/MS By MS/MS 1 1 9998700 4862800 5135900 658 2088 737 1695;1696 1585;1586 1585 4116 2 AVSETPAVPPVSEDEDDDDDDATPPPVIAPRPEHTK SSNALNVKAVSETPAV APRPEHTKSVYTRSVI K A V T K S 4 1 0 7 0 0 4 0 1 1 0 1 0 0 8 2 3 0 0 4 0 0 36 1 3807.7599 H0YCM0;E9PM17;B3KNX7;Q13153 H0YCM0 54 89 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 4 1.0347E-05 60.562 By MS/MS 1 24379000 24379000 0 659 473 738 1697 1587 1587 900 1 AVSFHLVHR KPFIEKKKAVSFHLVH VSFHLVHRSQRDPLAA K A V H R S 1 1 0 0 0 0 0 0 2 0 1 0 0 1 0 1 0 0 0 2 0 0 9 0 1064.5879 Q96GA3 Q96GA3 15 23 LTV1 Protein LTV1 homolog yes yes 3 0.020221 55.37 By matching By MS/MS 1 1 4044200 2099200 1945000 660 2488 739 1698;1699 1588 1588 5016 1 AVSLDSPVSVGSSPPVK SIRPPYNRAVSLDSPV VGSSPPVKNISAFPML R A V V K N 1 0 0 1 0 0 0 1 0 0 1 1 0 0 3 5 0 0 0 4 0 0 17 0 1624.8672 Q9Y6Q9 Q9Y6Q9 855 871 NCOA3 Nuclear receptor coactivator 3 yes yes 2 3.8897E-05 86.641 By MS/MS By MS/MS 1 1 14301000 8521900 5779500 661 2953 740 1700;1701 1589;1590;1591;1592 1591 6134 4 AVSMDNSNKYTK SGKAPRRRAVSMDNSN DNSNKYTKSRGRAAKK R A V T K S 1 0 2 1 0 0 0 0 0 0 0 2 1 0 0 2 1 0 1 1 0 0 12 1 1356.6344 O43524 O43524 251 262 FOXO3 Forkhead box protein O3 yes yes 2;3 3.4915E-48 192.65 By MS/MS By MS/MS 2 2 49129000 26403000 22726000 662 1389 741 1702;1703;1704;1705 1593;1594;1595;1596 1594 2545 4 AVSPAPQSSSR TWPVHRARAVSPAPQS PAPQSSSRLQPPFSPH R A V S R L 2 1 0 0 0 1 0 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 11 0 1085.5465 A0A075B784;Q9P275 A0A075B784 740 750 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.024051 69.261 By MS/MS 1 0 0 0 663 13 742 1706 1597 1597 1 AVSPTEPTPR TRPMTMHRAVSPTEPT SPTEPTPRSLSALSAY R A V P R S 1 1 0 0 0 0 1 0 0 0 0 0 0 0 3 1 2 0 0 1 0 0 10 0 1053.5455 H3BMH3;Q6PJI9 H3BMH3 112 121 WDR59 WD repeat-containing protein 59 yes no 2 0.012945 92.866 By matching By MS/MS 1 1 9885500 5046500 4839000 664 1115 743 1707;1708 1598 1598 2042 0 AVSSSSERGSSPSHSATSVHTSV LQREVATRAVSSSSER ATSVHTSV________ R A V S V - 2 1 0 0 0 0 1 1 2 0 0 0 0 0 1 10 2 0 0 3 0 0 23 1 2243.0414 F8WA39;Q13613 F8WA39 651 673 MTMR1 Myotubularin-related protein 1 yes no 3 0.00012236 72.09 By MS/MS By MS/MS 1 1 31210000 15795000 15415000 665 944 744 1709;1710 1599;1600 1600 1712;1713 2 AVSTVVVTTAPSPK GTASGSSKAVSTVVVT VTTAPSPKQAPEQQ__ K A V P K Q 2 0 0 0 0 0 0 0 0 0 0 1 0 0 2 2 3 0 0 4 0 0 14 0 1355.766 Q6P4R8 Q6P4R8 1280 1293 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 2;3 6.1852E-14 139.66 By MS/MS By MS/MS 1 2 11017000 5972200 5045000 666 2155 745 1711;1712;1713 1601;1602;1603 1601 4293 3 AVSVPASFFR PRGRRSRRAVSVPASF SVPASFFRRLAPSPAR R A V F R R 2 1 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 0 2 0 0 10 0 1079.5764 O14654 O14654 425 434 IRS4 Insulin receptor substrate 4 yes yes 2 2.6005E-06 152.69 By MS/MS By MS/MS 2 2 94205000 53054000 41150000 667 1343 746;747 1714;1715;1716;1717 1604;1605;1606;1607;1608;1609;1610;1611;1612;1613;1614;1615;1616;1617 1610 2435;2436 14 AVTAVTATAASDR ________________ TATAASDRMESDSDSD M A V D R M 5 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 2 0 0 13 0 1232.6361 K7EQ06;K7EJP7 K7EQ06 2 14 HDGFRP2 yes no 2 4.7554E-16 162.64 By MS/MS By MS/MS 1 1 3450300 1885500 1564900 668 1270 748 1718;1719 1618;1619 1619 2303 2 AVTDFVIPECQKKSPISK NLSAGTIKAVTDFVIP QKKSPISKSMGTLENT K A V S K S 1 0 0 1 1 1 1 0 0 2 0 3 0 1 2 2 1 0 0 2 0 0 18 2 2046.082 Q6P0N0 Q6P0N0 677 694 MIS18BP1 Mis18-binding protein 1 yes yes 3 8.0137E-06 87.647 By MS/MS By MS/MS 1 1 11503000 6410200 5092900 669 2150 749 1720;1721 1620;1621 1620 4281 2 AVTGQTTQVSPPVIAGR FAKPINSKAVTGQTTQ SPPVIAGRVLSQSTPG K A V G R V 2 1 0 0 0 2 0 2 0 1 0 0 0 0 2 1 3 0 0 3 0 0 17 0 1680.9159 Q6MZP7 Q6MZP7 255 271 LIN54 Protein lin-54 homolog yes yes 2 0.00014806 83.37 By MS/MS By MS/MS 2 1 4860100 2339700 2520400 670 2148 750 1722;1723;1724 1622;1623;1624 1622 4273 3 AVTIANSPSKPSEK AKMEHGPKAVTIANSP SPSKPSEKDSVVSLES K A V E K D 2 0 1 0 0 0 1 0 0 1 0 2 0 0 2 3 1 0 0 1 0 0 14 1 1427.762 Q8NEF9 Q8NEF9 197 210 SRFBP1 Serum response factor-binding protein 1 yes yes 2;3 2.0873E-12 135.72 By MS/MS By MS/MS 2 2 25413000 11920000 13493000 671 2349 751 1725;1726;1727;1728 1625;1626;1627;1628 1628 4710;4711 4 AVTIANSPSKPSEKDSVVSLESQK AKMEHGPKAVTIANSP VVSLESQKTPADPKLK K A V Q K T 2 0 1 1 0 1 2 0 0 1 1 3 0 0 2 6 1 0 0 3 0 0 24 2 2500.3021 Q8NEF9 Q8NEF9 197 220 SRFBP1 Serum response factor-binding protein 1 yes yes 3 0.0006236 62.589 By matching By MS/MS 1 1 34841000 18901000 15940000 672 2349 752 1729;1730 1629 1629 4710;4711 1 AVTPVPTKTEEVSNLK ESAPGSPRAVTPVPTK TEEVSNLKTLPKGLSA R A V L K T 1 0 1 0 0 0 2 0 0 0 1 2 0 0 2 1 3 0 0 3 0 0 16 1 1711.9356 Q6PKG0;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 524 539 LARP1 La-related protein 1 yes no 3 0.00012532 90.725 By MS/MS By MS/MS 1 1 62024000 30665000 31359000 673 2162 753 1731;1732 1630;1631 1630 6907 2 AVTSGLPGDTALLLPPSPRPSPR QPRVPSAKAVTSGLPG PSPRPSPRVHLPTQPA K A V P R V 2 2 0 1 0 0 0 2 0 0 4 0 0 0 6 3 2 0 0 1 0 0 23 1 2298.2696 H7BYY2;Q6W2J9 H7BYY2 320 342 BCOR BCL-6 corepressor yes no 3 0.00078555 58.835 By MS/MS By MS/MS 1 1 21026000 11879000 9147400 674 1155 754 1733;1734 1632;1633 1633 2100 2 AVTTVTQSTPVPGPSVPPPEELQVSPGPR TVSSTLTRAVTTVTQS LQVSPGPRQQLPPRQL R A V P R Q 1 1 0 0 0 2 2 2 0 0 1 0 0 0 8 3 4 0 0 5 0 0 29 0 2923.5291 P51610;H7C1C4 P51610 1483 1511 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 3;4 2.5116E-06 72.584 By MS/MS By MS/MS 2 1 138000000 81879000 56118000 675 1745 755 1735;1736;1737 1634;1635;1636;1637 1636 3298 4 AVVLPGGTATSPK MAASVARKAVVLPGGT GGTATSPKMIAKNVLG K A V P K M 2 0 0 0 0 0 0 2 0 0 1 1 0 0 2 1 2 0 0 2 0 0 13 0 1196.6765 Q8N1G0;F8WCX2;H0Y5I5 Q8N1G0 423 435 ZNF687 Zinc finger protein 687 yes no 2 0.0058365 98.902 By MS/MS By MS/MS 1 1 18660000 10868000 7791100 676 2298 756 1738;1739 1638;1639 1639 4618;6953;6954 2 AVVSPPKFVFGSESVK STSETTPKAVVSPPKF VFGSESVKSIFSSEKS K A V V K S 1 0 0 0 0 0 1 1 0 0 0 2 0 2 2 3 0 0 0 4 0 0 16 1 1676.9138 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;P0DJD0;P0DJD1 P49792 2507 2522 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 yes no 2;3 0.00024841 102.36 By MS/MS By MS/MS 2 2 26764000 14020000 12744000 677 1730 757 1740;1741;1742;1743 1640;1641;1642;1643 1643 3259 4 AVVVSPK SSPRQVKRAVVVSPKE RAVVVSPKEENKAAEP R A V P K E 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 7 0 698.43268 G3V5E1;O75909 G3V5E1 336 342 CCNK Cyclin-K yes no 2 0.031278 72.325 By MS/MS By matching 1 1 8169900 4100900 4068900 678 981 758 1744;1745 1644 1644 1785 1 AVVVSPKEENK SSPRQVKRAVVVSPKE VSPKEENKAAEPPPPK R A V N K A 1 0 1 0 0 0 2 0 0 0 0 2 0 0 1 1 0 0 0 3 0 0 11 1 1198.6558 G3V5E1;O75909 G3V5E1 336 346 CCNK Cyclin-K yes no 2;3 8.1062E-06 126.34 By MS/MS By MS/MS 1 2 27686000 4073300 23613000 679 981 759 1746;1747;1748 1645;1646;1647 1647 1785 3 AVYIGVHVPFSK KEELESHRAVYIGVHV GVHVPFSKESRRRHRH R A V S K E 1 0 0 0 0 0 0 1 1 1 0 1 0 1 1 1 0 0 1 3 0 0 12 0 1315.7289 E9PFN4;A0A0A0MST8;C9JRP1;Q9Y6M7 C9JRP1 42 53 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 no no 2 4.9854E-09 136.99 By MS/MS By MS/MS 1 1 3809800 2284300 1525500 680 606;782 760 1749;1750 1648;1649 1648 1106;7323 2 AVYIGVHVPFSKESR KEELESHRAVYIGVHV VPFSKESRRRHRHRGH R A V S R R 1 1 0 0 0 0 1 1 1 1 0 1 0 1 1 2 0 0 1 3 0 0 15 1 1687.9046 E9PFN4;A0A0A0MST8;C9JRP1;Q9Y6M7 C9JRP1 42 56 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 no no 3 0.00085391 74.78 By MS/MS 2 3082400 3082400 0 681 606;782 761;762 1751;1752 1650;1651 1650 1106;7323 2 AWEALGGAGTLRTSLQIGLSTHRK EWDCGTHRAWEALGGA IGLSTHRKTQLPRAAQ R A W R K T 3 2 0 0 0 1 1 4 1 1 4 1 0 0 0 2 3 1 0 0 0 0 24 2 2522.3718 E7EQL8 E7EQL8 1387 1410 TUBGCP6 yes yes 3 0.0080148 46.353 By matching By MS/MS 1 1 18660000 11927000 6733000 682 722 763 1753;1754 1652 1652 1285;1286;6422;6423 1 AWLDEDSNLSPSPLR GVPLEQYRAWLDEDSN NLSPSPLRDLSGGLGG R A W L R D 1 1 1 2 0 0 1 0 0 0 3 0 0 0 2 3 0 1 0 0 0 0 15 0 1698.8213 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 121 135 INO80B;INO80B-WBP1 INO80 complex subunit B yes no 2 0.0003914 91.457 By MS/MS By MS/MS 2 2 9853500 5583200 4270300 683 2612 764 1755;1756;1757;1758 1653;1654;1655 1654 5285 3 AYADSYYYEDGGMKPR FPEFPATRAYADSYYY EDGGMKPRVMKEAVST R A Y P R V 2 1 0 2 0 0 1 2 0 0 0 1 1 0 1 1 0 0 4 0 0 0 16 1 1884.7989 Q8IVM0 Q8IVM0 139 154 CCDC50 Coiled-coil domain-containing protein 50 yes yes 2;3 0.00011615 105.2 By MS/MS By MS/MS 3 2 19609000 10097000 9512800 684 2265 765;766 1759;1760;1761;1762;1763 1656;1657;1658;1659;1660;1661 1658 7782;7783;7784 6 AYDPDYER DYERAYHRAYDPDYER AYDPDYERAYSPEYRR R A Y E R A 1 1 0 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 8 0 1027.4247 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 315 322 TJP2 Tight junction protein ZO-2 yes no 2 0.024397 57.047 By MS/MS 1 1473400 1473400 0 685 368 767 1764 1662 1662 7253 1 AYEDLEFQQLER EQLDVAQRAYEDLEFQ LEFQQLERESRQEEED R A Y E R E 1 1 0 1 0 2 3 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 12 0 1539.7205 M0R353;Q6NSJ2 M0R353 38 49 PHLDB3 Pleckstrin homology-like domain family B member 3 yes no 2 4.4187E-07 123.79 By MS/MS By MS/MS 1 1 5686200 2867100 2819100 686 1320 768 1765;1766 1663;1664 1663 7493 2 AYELEKRTSPQVLGSILK TEHPVFPKAYELEKRT QVLGSILKSGTTSESG K A Y L K S 1 1 0 0 0 1 2 1 0 1 3 2 0 0 1 2 1 0 1 1 0 0 18 2 2031.1364 Q7Z417 Q7Z417 564 581 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 3 0.028712 61.127 By MS/MS By matching 1 1 6228000 3140000 3088000 687 2214 769 1767;1768 1665 1665 4412 1 AYEYVECPIR SVPAHQERAYEYVECP EYVECPIRGTAAENKE R A Y I R G 1 1 0 0 1 0 2 0 0 1 0 0 0 0 1 0 0 0 2 1 0 0 10 0 1298.5965 P53701 P53701 60 69 HCCS Cytochrome c-type heme lyase yes yes 2 0.0027228 95.502 By MS/MS By MS/MS 1 1 0 0 0 688 1763 770 1769;1770 1666;1667 1666 7640 2 AYIFIDEAHITQALIWLSQR LKTFAQARAYIFIDEA ALIWLSQRQKDNGCFR R A Y Q R Q 3 1 0 1 0 2 1 0 1 4 2 0 0 1 0 1 1 1 1 0 0 0 20 0 2387.2638 P01023 P01023 1054 1073 A2M Alpha-2-macroglobulin yes yes 3 7.6282E-10 103.1 By MS/MS 1 9663200 9663200 0 689 1515 771 1771 1668 1668 1 AYQDQISPVPGAPK TELIERLRAYQDQISP SPVPGAPKAPAATSIL R A Y P K A 2 0 0 1 0 2 0 1 0 1 0 1 0 0 3 1 0 0 1 1 0 0 14 0 1469.7514 W0Z7M9;E7ER32;A0A087X287;Q969V6;B0QY83;A0A087WU73 W0Z7M9 414 427 mkl1;MKL1 MKL/myocardin-like protein 1 yes no 2 3.427E-06 120.21 By MS/MS By MS/MS 1 1 30496000 16849000 13647000 690 3015 772 1772;1773 1669;1670 1669 6212 2 AYQHGGVTGLSQY DSTYQGERAYQHGGVT GVTGLSQY________ R A Y Q Y - 1 0 0 0 0 2 0 3 1 0 1 0 0 0 0 1 1 0 2 1 0 0 13 0 1379.647 Q92900 Q92900 1117 1129 UPF1 Regulator of nonsense transcripts 1 yes yes 2 7.4791E-05 114.83 By MS/MS By MS/MS 2 2 17746000 8468300 9277500 691 2445 773 1774;1775;1776;1777 1671;1672;1673 1671 4922;7829 3 AYSFCGTVEYMAPEVVNR EAIDHEKKAYSFCGTV MAPEVVNRQGHSHSAD K A Y N R Q 2 1 1 0 1 0 2 1 0 0 0 0 1 1 1 1 1 0 2 3 0 0 18 0 2091.9394 P51812;B1AXG1;E9PGT3;Q15418;Q9UK32 E9PGT3 219 236 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 no no 2;3 2.0771E-09 118.31 By MS/MS By matching 3 2 25589000 21207000 4381500 692 796;1746;2824 774;775 1778;1779;1780;1781;1782 1674;1675;1676 1676 98 1427;3304 3 AYSFCGTVEYMAPEVVNRR ESIDHEKKAYSFCGTV APEVVNRRGHTQSADW K A Y R R G 2 2 1 0 1 0 2 1 0 0 0 0 1 1 1 1 1 0 2 3 0 0 19 1 2248.0405 P51812;B1AXG1;Q9UK32 P51812 225 243 RPS6KA3;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-6 no no 3 0.011432 45.436 By MS/MS By matching 1 1 3512900 2637300 875580 693 1746;2824 776 1783;1784 1677 1677 3304 1 AYSNSIVR LSEPGSARAYSNSIVR AYSNSIVRSSRTTLDR R A Y V R S 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 1 0 0 8 0 908.47158 Q9H1Z4 Q9H1Z4 77 84 WDR13 WD repeat-containing protein 13 yes yes 2 0.014276 80.455 By matching By MS/MS 1 1 3812600 1700500 2112100 694 2640 777 1785;1786 1678 1678 5381 1 AYSPEYR AYDPDYERAYSPEYRR RAYSPEYRRGARHDAR R A Y Y R R 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 2 0 0 0 7 0 884.40283 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 323 329 TJP2 Tight junction protein ZO-2 yes no 2 0.026951 76.17 By MS/MS By MS/MS 1 1 8571900 4347600 4224300 695 368 778 1787;1788 1679;1680 1679 2 AYSSFGGGR DFDTYDDRAYSSFGGG YSSFGGGRGSRGSAGG R A Y G R G 1 1 0 0 0 0 0 3 0 0 0 0 0 1 0 2 0 0 1 0 0 0 9 0 900.40898 Q15056 Q15056 11 19 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 0.001501 113.41 By MS/MS By MS/MS 2 2 21135000 12274000 8860300 696 1973 779 1789;1790;1791;1792 1681;1682;1683;1684;1685 1681 7709 5 AYTHQVVTR KSFGSPNRAYTHQVVT YTHQVVTRWYRAPELL R A Y T R W 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 1 2 0 0 9 0 1073.5618 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 75 83 CDK7 Cyclin-dependent kinase 7 yes no 3 0.0043791 86.114 By MS/MS By MS/MS 1 1 9027800 3994800 5033100 697 644 780 1793;1794 1686;1687 1686 6390 2 AYTPPPPLGPHPNLGK VLIGNPIRAYTPPPPL GPHPNLGKSPSPVQRI R A Y G K S 1 0 1 0 0 0 0 2 1 0 2 1 0 0 6 0 1 0 1 0 0 0 16 0 1654.8831 J3QS41;P42694 J3QS41 1162 1177 HELZ Probable helicase with zinc finger domain yes no 3 0.027843 46.964 By MS/MS 1 0 0 0 698 1259 781 1795 1688 1688 1 AYTPVVVTQWYR REYGSPLKAYTPVVVT VVVTQWYRAPELLLGA K A Y Y R A 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 2 1 2 3 0 0 12 0 1481.7667 Q5QPR4;Q5QPR3;Q9UQ88 Q5QPR4 544 555 CDK11A Cyclin-dependent kinase 11A yes no 2 0.018992 76.326 By MS/MS 1 1173000 1173000 0 699 2084 782 1796 1689 1689 7741 1 AYTSPLIDMFNNPATAAPNSQR MPPAPSGRAYTSPLID TAAPNSQRVNNSTGTS R A Y Q R V 4 1 3 1 0 1 0 0 0 1 1 0 1 1 3 2 2 0 1 0 0 0 22 0 2378.1325 Q9UHR4 Q9UHR4 292 313 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 3 3.8845E-20 127.67 By MS/MS By MS/MS 2 3 21080000 13015000 8064400 700 2816 783;784 1797;1798;1799;1800;1801 1690;1691;1692;1693 1692 367 7930 4 CAAPRPPSSSPEQR CPETAEAKCAAPRPPS PSSSPEQRTGQPSAPG K C A Q R T 2 2 0 0 1 1 1 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 14 1 1538.726 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 551 564 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 2;3 0.019508 58.98 By MS/MS By matching 2 2 18463000 13107000 5356700 701 814 785 1802;1803;1804;1805 1694;1695 1694 1457 2 CALSSPSLAFTPPIK SVMESSDRCALSSPSL LAFTPPIKTLGTPTQP R C A I K T 2 0 0 0 1 0 0 0 0 1 2 1 0 1 3 3 1 0 0 0 0 0 15 0 1587.8331 Q8NFH5 Q8NFH5 255 269 NUP35 Nucleoporin NUP53 yes yes 2 0.0034398 73.887 By MS/MS By MS/MS 3 3 31811000 19266000 12545000 702 2354 786 1806;1807;1808;1809;1810;1811 1696;1697;1698;1699;1700;1701 1699 4721;4722 5 CAPSAGSPAAAVGR GTERGPGRCAPSAGSP SPAAAVGRESPGAAAT R C A G R E 5 1 0 0 1 0 0 2 0 0 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1270.6088 Q7L2J0 Q7L2J0 54 67 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 0.0035544 73.296 By MS/MS By MS/MS 1 1 20550000 10697000 9853200 703 2198 787 1812;1813 1702;1703 1703 4375 2 CASESSISSSNSPLCDSSFNAPK RKATPRRRCASESSIS DSSFNAPKCGRGKPAL R C A P K C 2 0 2 1 2 0 1 0 0 1 1 1 0 1 2 9 0 0 0 0 0 0 23 0 2431.0268 O95696 O95696 850 872 BRD1 Bromodomain-containing protein 1 yes yes 2;3 0.00067865 65.16 By MS/MS By MS/MS 2 2 27820000 18773000 9047300 704 1498 788 1814;1815;1816;1817 1704;1705 1704 2776;2777;2778 2 CASLEEILSQR LTPTEKGRCASLEEIL LEEILSQRDAASARTL R C A Q R D 1 1 0 0 1 1 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1304.6395 Q5T4P9;Q53GL0 Q5T4P9 86 96 PLEKHO1 Pleckstrin homology domain-containing family O member 1 yes no 2 0.002443 82.85 By MS/MS By MS/MS 1 1 0 0 0 705 2057 789 1818;1819 1706;1707 1706 4044 2 CCSPPNELGFR SENEAIKRCCSPPNEL PPNELGFRRGSSYSKH R C C F R R 0 1 1 0 2 0 1 1 0 0 1 0 0 1 2 1 0 0 0 0 0 0 11 0 1335.57 C9JG86;Q9BYW2;H7BZ93;H7BXT4;H7C3H4 C9JG86 486 496 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.00020524 111.5 By MS/MS By MS/MS 1 1 16661000 9916500 6744900 706 591 790 1820;1821 1708;1709;1710 1710 1076 3 CDAGSPSKDSAAEENLWSLVAK EDVAASHRCDAGSPSK NLWSLVAKVKKKDPRE R C D A K V 4 0 1 2 1 0 2 1 0 0 2 2 0 0 1 4 0 1 0 1 0 0 22 1 2334.0798 O75132 O75132 1049 1070 ZBED4 Zinc finger BED domain-containing protein 4 yes yes 3 0.00072519 64.035 By MS/MS By matching 1 1 9805500 4763600 5041800 707 1429 791 1822;1823 1711 1711 2630 1 CDGDASPPSPAR SPPRHQSRCDGDASPP ASPPSPARWSLGRKRR R C D A R W 2 1 0 2 1 0 0 1 0 0 0 0 0 0 3 2 0 0 0 0 0 0 12 0 1228.5142 E7EUV9;F8W8D3;Q14493 E7EUV9 15 26 SLBP Histone RNA hairpin-binding protein yes no 2 0.0037483 79.804 By MS/MS By MS/MS 1 1 5636700 2644500 2992200 708 741 792 1824;1825 1712;1713;1714 1714 1340 3 CDILVQEELLASPK IDAIDDQKCDILVQEE EELLASPKKLLEDTLF K C D P K K 1 0 0 1 1 1 2 0 0 1 3 1 0 0 1 1 0 0 0 1 0 0 14 0 1613.8335 Q96JM3 Q96JM3 592 605 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0013929 85.473 By MS/MS By MS/MS 1 1 9994000 6824200 3169700 709 2509 793 1826;1827 1715;1716 1716 5048 2 CDITGLLEGQEYK PIETERSKCDITGLLE LLEGQEYKFRVIAKNK K C D Y K F 0 0 0 1 1 1 2 2 0 1 2 1 0 0 0 0 1 0 1 0 0 0 13 0 1524.713 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42 A0A0A0MRA3 8949 8961 TTN Titin yes no 2 0.01953 45.368 By MS/MS By matching 1 1 8068400 4567600 3500800 710 173 794 1828;1829 1717 1717 7192 1 CDSADLR QKGDKKLRCDSADLRH RCDSADLRHDIDRRRK R C D L R H 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 7 0 835.34942 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 688 694 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.024265 81.525 By MS/MS 1 2327500 2327500 0 711 2759 795 1830 1718 1718 1 CDSSPDSAEDVR QFSVLFTKCDSSPDSA PDSAEDVRKLCPDCPL K C D V R K 1 1 0 3 1 0 1 0 0 0 0 0 0 0 1 3 0 0 0 1 0 0 12 0 1336.5201 CON__P12763;P02765 CON__P12763 132 143 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B no no 2 6.6196E-05 117.48 By MS/MS By MS/MS 2 2 15951000 8464000 7487200 + 712 634;1519 796 1831;1832;1833;1834 1719;1720;1721;1722 1720 1151 4 CEFQDAYVLLSEK INTSKGQKCEFQDAYV AYVLLSEKKISSIQSI K C E E K K 1 0 0 1 1 1 2 0 0 0 2 1 0 1 0 1 0 0 1 1 0 0 13 0 1600.7443 P10809 P10809 237 249 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.00482 83.182 By matching By MS/MS 1 1 4284700 2687600 1597200 713 1557 797 1835;1836 1723 1723 1 CENTPLIGRESPPPSYTSSMR NANFQNPRCENTPLIG PSYTSSMRAKYLATSQ R C E M R A 0 2 1 0 1 0 2 1 0 1 1 0 1 0 4 4 2 0 1 0 0 0 21 1 2378.0995 Q9C0H2 Q9C0H2 486 506 TTYH3 Protein tweety homolog 3 yes yes 3 0.011185 47.68 By matching By MS/MS 1 1 9258600 5934700 3324000 714 2620 798 1837;1838 1724 1724 5319 1 CGDAEDVYYKSMPNLGSR QTEPPPAKCGDAEDVY SMPNLGSRNHVHQLHT K C G S R N 1 1 1 2 1 0 1 2 0 0 1 1 1 0 1 2 0 0 2 1 0 0 18 1 2060.8932 H0Y9K5;E9PBG4;E7EW95;E7EVD6;E7ETE3;E7EUW2;Q9HAR2 H0Y9K5 856 873 ADGRL3;LPHN3 Latrophilin-3 yes no 3 0.010654 45.883 By MS/MS 1 3128300 3128300 0 715 737 799 1839 1725 1725 7365;7366 1 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK PPVVLRLKCGSGPVHI DEEEEDVKLLSISGKR K C G V K L 2 0 0 3 1 1 8 3 2 1 1 1 0 0 1 3 0 0 0 4 0 0 31 0 3379.4634 P06748;E5RI98 P06748 104 134 NPM1 Nucleophosmin no no 3;4 5.3983E-37 117.96 By MS/MS By MS/MS 8 9 2652300000 997380000 1654900000 716 1533;699 800 1840;1841;1842;1843;1844;1845;1846;1847;1848;1849;1850;1851;1852;1853;1854;1855;1856 1726;1727;1728;1729;1730;1731;1732;1733;1734;1735;1736;1737;1738;1739;1740;1741;1742;1743;1744;1745;1746;1747;1748 1734 1237 22 CGSSEDLHDSVR RDSEEGPRCGSSEDLH EDLHDSVREGPDLDRP R C G V R E 0 1 0 2 1 0 1 1 1 0 1 0 0 0 0 3 0 0 0 1 0 0 12 0 1360.5677 Q7Z4V5 Q7Z4V5 631 642 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 2;3 4.3034E-27 174.21 By MS/MS By MS/MS 2 2 15703000 6817600 8885800 717 2218 801;802 1857;1858;1859;1860 1749;1750;1751;1752 1750 4434;4435 4 CHSLGYNFIHK LIPHGHRKCHSLGYNF LGYNFIHKMNTAEFKS K C H H K M 0 0 1 0 1 0 0 1 2 1 1 1 0 1 0 1 0 0 1 0 0 0 11 0 1374.6503 Q86X27 Q86X27 341 351 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes yes 3 4.6211E-06 120.84 By MS/MS By MS/MS 1 1 6180600 2714100 3466500 718 2249 803 1861;1862 1753;1754 1754 4506 2 CIACQAAKLSPR QNKVTDNKCIACQAAK QAAKLSPRDTAKQTGI K C I P R D 3 1 0 0 2 1 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 12 1 1373.6908 P49790 P49790 678 689 NUP153 Nuclear pore complex protein Nup153 yes yes 2;3 0.0014963 92.265 By MS/MS By MS/MS 2 2 130420000 74716000 55704000 719 1729 804 1863;1864;1865;1866 1755;1756;1757;1758;1759 1759 3245 5 CIPALDSLTPANEDQK GGGCALLRCIPALDSL TPANEDQKIGIEIIKR R C I Q K I 2 0 1 2 1 1 1 0 0 1 2 1 0 0 2 1 1 0 0 0 0 0 16 0 1770.8458 P10809 P10809 447 462 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.016346 59.418 By matching By MS/MS 1 1 5382400 3175300 2207100 720 1557 805 1867;1868 1760 1760 1 CLAHSLVGTPNYIAPEVLLR RARKQHQRCLAHSLVG IAPEVLLRKGYTQLCD R C L L R K 2 1 1 0 1 0 1 1 1 1 4 0 0 0 2 1 1 0 1 2 0 0 20 0 2222.1882 Q9NRM7;O95835 O95835 868 887 LATS2;LATS1 Serine/threonine-protein kinase LATS2;Serine/threonine-protein kinase LATS1 no no 3 0.0014307 65.022 By MS/MS By MS/MS 1 1 7991500 5468700 2522800 721 2722;1504 806 1869;1870 1761;1762 1761 2789 2 CLGPPTTPGPYR QAPCPRERCLGPPTTP PTTPGPYRSIYFSSPK R C L Y R S 0 1 0 0 1 0 0 2 0 0 1 0 0 0 4 0 2 0 1 0 0 0 12 0 1314.6391 A2IDA3;P29372 A2IDA3 44 55 MPG DNA-3-methyladenine glycosylase yes no 2 4.3168E-06 122.33 By MS/MS By MS/MS 1 1 16676000 9374500 7301000 722 398 807 1871;1872 1763;1764 1763 6323;6324 2 CLLMQVGFSDKK QHQDDQDKCLLMQVGF QVGFSDKKTIITKSAR K C L K K T 0 0 0 1 1 1 0 1 0 0 2 2 1 1 0 1 0 0 0 1 0 0 12 1 1424.7156 P17025 P17025 116 127 ZNF182 Zinc finger protein 182 yes yes 2 0.015002 64.534 By MS/MS 1 32434000 0 32434000 723 1588 808 1873 1765 1765 196 2916 1 CLPGVLASPELR LPSYLQDRCLPGVLAS VLASPELRSYPYAFSV R C L L R S 1 1 0 0 1 0 1 1 0 0 3 0 0 0 2 1 0 0 0 1 0 0 12 0 1310.7017 A0A075B6Q3;Q5H9F3 A0A075B6Q3 89 100 BCORL1 BCL-6 corepressor-like protein 1 yes no 2 0.00011717 115.12 By MS/MS By MS/MS 1 1 10362000 6070700 4291300 724 8 809 1874;1875 1766;1767 1767 20 2 CLQLSPPSQSK VLVRATSRCLQLSPPS LSPPSQSKLAQRRQRA R C L S K L 0 0 0 0 1 2 0 0 0 0 2 1 0 0 2 3 0 0 0 0 0 0 11 0 1243.6231 Q9HBH9 Q9HBH9 433 443 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 yes yes 2 0.0046881 76.522 By MS/MS By matching 1 1 2717700 1706100 1011700 725 2689 810 1876;1877 1768 1768 5484 1 CLSDPGPHPEPGEGEPFFPKGQ PSSQRIQRCLSDPGPH EPFFPKGQ________ R C L G Q - 0 0 0 1 1 1 3 4 1 0 1 1 0 2 6 1 0 0 0 0 0 0 22 1 2378.0637 P19634 P19634 794 815 SLC9A1 Sodium/hydrogen exchanger 1 yes yes 3 0.0052509 50.358 By MS/MS By MS/MS 1 1 15638000 7615400 8022400 726 1605 811 1878;1879 1769;1770 1770 2964 2 CLSLVNTPQHTPSGQPKPAK RQSHTPHKCLSLVNTP SGQPKPAKAHTCPPPP K C L A K A 1 0 1 0 1 2 0 1 1 0 2 2 0 0 4 2 2 0 0 1 0 0 20 1 2159.1157 Q6ZRQ1 Q6ZRQ1 321 340 NSUN4 yes yes 2 0.021496 49.606 By matching By MS/MS 1 1 21304000 10913000 10391000 727 2182 812 1880;1881 1771 1771 0 CLSPDDSTVK ALGEAEERCLSPDDST SPDDSTVKMASPPPSG R C L V K M 0 0 0 2 1 0 0 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 10 0 1120.507 E9PGC8;P78559 E9PGC8 1222 1231 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.0021032 91.469 By MS/MS By MS/MS 1 1 8762800 4638200 4124500 728 791 813 1882;1883 1772;1773 1772 1417 2 CLSTTPPGDMAHAR TVADQSGRCLSTTPPG PGDMAHARVSEPRPRP R C L A R V 2 1 0 1 1 0 0 1 1 0 1 0 1 0 2 1 2 0 0 0 0 0 14 0 1512.6813 Q9BY89 Q9BY89 631 644 KIAA1671 Uncharacterized protein KIAA1671 yes yes 3 0.0023186 78.249 By MS/MS By MS/MS 1 1 10736000 6726400 4009900 729 2604 814 1884;1885 1774;1775 1774 7035;7036 2 CLSYGGTSQLR HPPSPPKRCLSYGGTS YGGTSQLRVPEEPAAE R C L L R V 0 1 0 0 1 1 0 2 0 0 2 0 0 0 0 2 1 0 1 0 0 0 11 0 1240.587 H0Y894;O95382 H0Y894 686 696 MAP3K6 Mitogen-activated protein kinase kinase kinase 6 yes no 2 0.0067428 73.881 By MS/MS By MS/MS 1 1 4169700 2294000 1875600 730 1040 815 1886;1887 1776;1777 1776 1929 2 CLVAGLLSPR LIPDGYNRCLVAGLLS VAGLLSPRFVDVQPSS R C L P R F 1 1 0 0 1 0 0 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 10 0 1084.6063 Q8WYP5 Q8WYP5 521 530 AHCTF1 Protein ELYS yes yes 2 1.8691E-05 143.42 By MS/MS By MS/MS 1 1 16775000 9444300 7330300 731 2417 816 1888;1889 1778;1779;1780;1781 1781 4848 4 CLYASVLTAQPR QIIPTARRCLYASVLT SVLTAQPRLMEPIYLV R C L P R L 2 1 0 0 1 1 0 0 0 0 2 0 0 0 1 1 1 0 1 1 0 0 12 0 1377.7075 P13639 P13639 728 739 EEF2 Elongation factor 2 yes yes 2 0.0020232 100.48 By MS/MS By matching 1 1 3384400 2271500 1112900 732 1575 817 1890;1891 1782 1782 1 CNMSPVVK KGSLDLQKCNMSPVVK CNMSPVVKIEQVFALQ K C N V K I 0 0 1 0 1 0 0 0 0 0 0 1 1 0 1 1 0 0 0 2 0 0 8 0 933.44121 Q9BZ95 Q9BZ95 495 502 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes yes 2 0.0049634 102.95 By MS/MS By MS/MS 1 1 1640800 0 1640800 733 2609 818 1892;1893 1783;1784 1783 5281 2 CPAKPEEEGMMINISIGYRYPICLGR VPGPIDDRCPAKPEEE RYPICLGRAPGCLMPA R C P G R A 1 2 1 0 2 0 3 3 0 4 1 1 2 0 3 1 0 0 2 0 0 0 26 2 3053.4595 Q9UKH3 Q9UKH3 141 166 ERVK-9 Endogenous retrovirus group K member 9 Env polyprotein;Surface protein;Transmembrane protein yes yes 3 0.020706 44.052 By matching By MS/MS 1 1 4761300 3319000 1442300 734 2830 819 1894;1895 1785 1785 5827 0 CPFTGNVSIR EGTYIDKKCPFTGNVS FTGNVSIRGRILSGVV K C P I R G 0 1 1 0 1 0 0 1 0 1 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1149.5601 M0QZC5;P62280 M0QZC5 60 69 RPS11 40S ribosomal protein S11 yes no 2 0.022405 68.371 By MS/MS By matching 1 1 4872900 3079800 1793100 735 1310 820 1896;1897 1786 1786 1 CPQPPQEQQQLNGLISPELR AKGHPCLRCPQPPQEQ GLISPELRHLRAAASL R C P L R H 0 1 1 0 1 5 2 1 0 1 3 0 0 0 4 1 0 0 0 0 0 0 20 0 2331.1641 Q147X3 Q147X3 74 93 NAA30 N-alpha-acetyltransferase 30 yes yes 3 0.0062155 52.185 By MS/MS By matching 1 1 4513500 2581300 1932100 736 1959 821 1898;1899 1787 1787 3806 1 CPSLDNLAVPESPGVGGGK PDPFLKPRCPSLDNLA SPGVGGGKASEPLLSP R C P G K A 1 0 1 1 1 0 1 4 0 0 2 1 0 0 3 2 0 0 0 2 0 0 19 0 1852.8989 O14686 O14686 2249 2267 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 3.8945E-06 94.281 By matching By MS/MS 1 1 7357800 4590800 2767000 737 1344 822 1900;1901 1788 1788 2446 1 CQENGQELSPIALEPGPEPHR QELVPGLRCQENGQEL EPGPEPHRAKQEARNQ R C Q H R A 1 1 1 0 1 2 4 2 1 1 2 0 0 0 4 1 0 0 0 0 0 0 21 0 2357.107 H0YB23;A0A0A0MR08;E7EST9;B5MEG5 H0YB23 14 34 USP19 Ubiquitin carboxyl-terminal hydrolase yes no 3 0.004174 54.259 By MS/MS By MS/MS 1 1 15215000 7754000 7461500 738 168 823 1902;1903 1789;1790 1790 299 2 CQSLTEDLEFR LKVDLENRCQSLTEDL LTEDLEFRKSMYEEEI R C Q F R K 0 1 0 1 1 1 2 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 11 0 1396.6293 P20700;E9PBF6;A0A0D9SFE5 P20700 198 208 LMNB1 Lamin-B1 yes no 2 0.00031161 110.31 By MS/MS By MS/MS 1 1 3117600 1669100 1448500 739 1612 824 1904;1905 1791;1792 1791 2973 2 CRNSIASCADEQPHIGNYR RTSRSGARCRNSIASC QPHIGNYRLLKTIGKG R C R Y R L 2 2 2 1 2 1 1 1 1 2 0 0 0 0 1 2 0 0 1 0 0 0 19 1 2246.9909 A0A0A0MQR8;A0A0A0MSZ1;A0A0A0MT23;J3KNR0;P27448;A0A0A0MST9;H0YKJ3;H0YNV4 A0A0A0MQR8 39 57 MARK3 MAP/microtubule affinity-regulating kinase 3 yes no 3 1.9124E-06 87.793 By MS/MS By MS/MS 1 1 11980000 7953800 4025900 740 160 825 1906;1907 1793;1794 1793 289 2 CRNSITSATDEQPHIGNYR SSRQNIPRCRNSITSA QPHIGNYRLQKTIGKG R C R Y R L 1 2 2 1 1 1 1 1 1 2 0 0 0 0 1 2 2 0 1 0 0 0 19 1 2218.0185 B4DIB3;A0A087X0I6;Q9P0L2 B4DIB3 43 61 MARK1 Serine/threonine-protein kinase MARK1 yes no 3 0.0096574 49.515 By MS/MS By MS/MS 1 1 7673100 5062800 2610300 741 127 826 1908;1909 1795;1796 1795 226 2 CRSPGMLEPLGSSR MSPTPLDRCRSPGMLE LEPLGSSRTPMSVLQQ R C R S R T 0 2 0 0 1 0 1 2 0 0 2 0 1 0 2 3 0 0 0 0 0 0 14 1 1545.7392 Q9UQ35 Q9UQ35 2130 2143 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.00053774 89.26 By MS/MS By MS/MS 4 2 121720000 86465000 35259000 742 2877 827;828 1910;1911;1912;1913;1914;1915 1797;1798;1799;1800;1801;1802 1801 373 5945 6 CRSVELDLNQAHMEETPK GVISPERRCRSVELDL AHMEETPKRKGAKVFG R C R P K R 1 1 1 1 1 1 3 0 1 0 2 1 1 0 1 1 1 0 0 1 0 0 18 1 2155.999 Q14680 Q14680 503 520 MELK Maternal embryonic leucine zipper kinase yes yes 3 0.00058201 72.927 By MS/MS By MS/MS 1 1 8334800 4894000 3440700 743 1954 829 1916;1917 1803;1804 1804 3786 2 CRSVELDLNQAHMEETPKR GVISPERRCRSVELDL HMEETPKRKGAKVFGS R C R K R K 1 2 1 1 1 1 3 0 1 0 2 1 1 0 1 1 1 0 0 1 0 0 19 2 2312.1001 Q14680 Q14680 503 521 MELK Maternal embryonic leucine zipper kinase yes yes 4 0.013773 52.731 By MS/MS By MS/MS 1 1 4955600 2308000 2647600 744 1954 830 1918;1919 1805;1806 1806 3786 1 CSASPPLRR AAKQPSDKCSASPPLR SASPPLRRQCIRENGN K C S R R Q 1 2 0 0 1 0 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 9 1 1042.5342 P46013 P46013 824 832 MKI67 Antigen KI-67 yes yes 3 0.028234 41.029 By MS/MS By MS/MS 1 1 2339300 1438900 900420 745 1704 831 1920;1921 1807;1808 1807 2 CSATPSAQVKPIVSASPPSR VIEMSSSRCSATPSAQ VSASPPSRAVAGSRSS R C S S R A 3 1 0 0 1 1 0 0 0 1 0 1 0 0 4 5 1 0 0 2 0 0 20 1 2039.047 Q96EV2;H0Y3K4 Q96EV2 726 745 RBM33 RNA-binding protein 33 yes no 3 0.00081722 68.895 By MS/MS By MS/MS 2 2 25863000 13524000 12340000 746 2480 832 1922;1923;1924;1925 1809;1810;1811;1812;1813 1813 5000;5001 5 CSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAK ICAGGQDRCSDAAGYP ISPLDLAKLNQVARQQ R C S A K L 5 0 0 4 1 2 1 3 3 2 4 1 0 0 4 3 2 0 2 0 0 0 37 0 3944.8639 Q15365 Q15365 201 237 PCBP1 Poly(rC)-binding protein 1 yes yes 4 0.0028827 43.04 By MS/MS By matching 1 1 11270000 7270100 4000200 747 1984 833 1926;1927 1814 1814 3869;6831 1 CSDNSSYEEPLSPISASSSTSR HSQEDSSRCSDNSSYE SASSSTSRRRQGQRDL R C S S R R 1 1 1 1 1 0 2 0 0 1 1 0 0 0 2 9 1 0 1 0 0 0 22 0 2360.0074 B3KPJ4;A0A0A0MSI2;Q8IXK0 B3KPJ4 346 367 PHC2 Polyhomeotic-like protein 2 yes no 2;3 4.2422E-09 93.73 By MS/MS By MS/MS 2 2 81040000 41621000 39419000 748 216 834 1928;1929;1930;1931 1815;1816;1817;1818 1817 391 4 CSDVSELSSSPPGPYHQEPYVCKPEER ALMVDSQKCSDVSELS YVCKPEERFRAPPILP K C S E R F 0 1 0 1 2 1 4 1 1 0 1 1 0 0 5 5 0 0 2 2 0 0 27 1 3133.3757 Q9Y478;F5H610;F5H2X8 Q9Y478 173 199 PRKAB1 5-AMP-activated protein kinase subunit beta-1 yes no 3 0.00093631 56.298 By MS/MS 1 6757300 6757300 0 749 2915 835 1932 1819 1819 6062;6063;6064 1 CSGPGLSPGMVR VTDASKVKCSGPGLSP GLSPGMVRANLPQSFQ K C S V R A 0 1 0 0 1 0 0 3 0 0 1 0 1 0 2 2 0 0 0 1 0 0 12 0 1216.5693 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 1453 1464 FLNA Filamin-A yes no 2 6.6033E-09 133.16 By MS/MS By MS/MS 3 4 180350000 94967000 85384000 750 1613 836;837 1933;1934;1935;1936;1937;1938;1939 1820;1821;1822;1823;1824;1825 1824 199 2979 6 CSSAFFEEER RLMGKPRRCSSAFFEE SAFFEEERSALKQKRQ R C S E R S 1 1 0 0 1 0 3 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 10 0 1260.5081 H0Y322;Q5TKA1;C9J5J4;H7C4T7 H0Y322 247 256 LIN9 Protein lin-9 homolog yes no 2 0.0016609 99.539 By MS/MS By MS/MS 1 1 3025800 1372000 1653800 751 1008 838 1940;1941 1826;1827 1826 1856 2 CSSLGDLLGEGPR LPPQFHPRCSSLGDLL DLLGEGPRHPLQPRER R C S P R H 0 1 0 1 1 0 1 3 0 0 3 0 0 0 1 2 0 0 0 0 0 0 13 0 1359.6453 Q8TD55 Q8TD55 388 400 PLEKHO2 Pleckstrin homology domain-containing family O member 2 yes yes 2 0.0058803 70.373 By MS/MS 1 1076600 0 1076600 752 2380 839 1942 1828 1828 4764 1 CSSPVDTECSHAEGSR CCSESGPRCSSPVDTE CSHAEGSRSQGPEKAF R C S S R S 1 1 0 1 2 0 2 1 1 0 0 0 0 0 1 4 1 0 0 1 0 0 16 0 1777.6996 T1ECW5;O75170;A0A0A0MSJ8 T1ECW5 495 510 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 3 0.0017966 66.261 By MS/MS By matching 1 1 8235900 3922300 4313600 753 3013 840 1943;1944 1829 1829 6206 1 CSSSSGGGSSGDEDGLELDGAPGGGKR RKRERPERCSSSSGGG GAPGGGKRAARPATAG R C S K R A 1 1 0 3 1 0 2 9 0 0 2 1 0 0 1 6 0 0 0 0 0 0 27 1 2495.0467 Q9P258 Q9P258 42 68 RCC2 Protein RCC2 yes yes 3 0.0026226 48.867 By MS/MS 1 6826000 6826000 0 754 2782 841 1945 1830 1830 5712;5713 1 CSSVTGVQR EQQEFRSRCSSVTGVQ SSVTGVQRRVHEGSQK R C S Q R R 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 2 1 0 0 2 0 0 9 0 992.47093 O60343 O60343 316 324 TBC1D4 TBC1 domain family member 4 yes yes 2 0.0074155 79.07 By MS/MS 1 8118200 0 8118200 755 1407 842 1946 1831 1831 2588 1 CSVLPLSQNQEFMPFVK PAVVAPFKCSVLPLSQ QEFMPFVKELSEALTR K C S V K E 0 0 1 0 1 2 1 0 0 0 2 1 1 2 2 2 0 0 0 2 0 0 17 0 2022.9907 P41250 P41250 616 632 GARS Glycine--tRNA ligase yes yes 2 0.015627 54.393 By matching By MS/MS 1 2 122900000 62737000 60165000 756 1694 843 1947;1948;1949 1832 1832 3108 1 CSVSLSNVEAR YRRQNPSRCSVSLSNV SLSNVEARRFFNKEFL R C S A R R 1 1 1 0 1 0 1 0 0 0 1 0 0 0 0 3 0 0 0 2 0 0 11 0 1220.5819 P47712 P47712 726 736 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 2 5.3396E-06 127.56 By MS/MS By MS/MS 2 2 18102000 8950400 9152000 757 1716 844 1950;1951;1952;1953 1833;1834;1835;1836 1835 3199;3200 4 CTGDFSPSPEKLVK NQPASAAKCTGDFSPS PSPEKLVKSGNPLQPV K C T V K S 0 0 0 1 1 0 1 1 0 0 1 2 0 1 2 2 1 0 0 1 0 0 14 1 1563.7603 Q5VWN6 Q5VWN6 1534 1547 FAM208B Protein FAM208B yes yes 2 0.00032624 109.83 By MS/MS By MS/MS 1 1 5748200 3077900 2670300 758 2120 845 1954;1955 1837;1838;1839;1840;1841 1838 4204 5 CTGGEVGATSALAPK EIKVVYLRCTGGEVGA ATSALAPKIGPLGLSP R C T P K I 3 0 0 0 1 0 1 3 0 0 1 1 0 0 1 1 2 0 0 1 0 0 15 0 1417.6871 P30050 P30050 17 31 RPL12 60S ribosomal protein L12 yes yes 2 0.0075373 51.727 By MS/MS 1 2171400 2171400 0 759 1651 846 1956 1842 1842 0 CTLPEHESPSQDISDACEAESTER PKSEDADRCTLPEHES CEAESTERCEMSEHPS R C T E R C 2 1 0 2 2 1 5 0 1 1 1 0 0 0 2 4 2 0 0 0 0 0 24 0 2747.1287 Q32MZ4 Q32MZ4 726 749 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 3 4.022E-05 74.364 By MS/MS By MS/MS 1 2 17724000 11106000 6618300 760 2034 847 1957;1958;1959 1843;1844;1845 1843 3973;3974 3 CVACQNPDKPSPSTSVPAPASFK RNEANATRCVACQNPD VPAPASFKFGTSETSK R C V F K F 3 0 1 1 2 1 0 0 0 0 0 2 0 1 5 4 1 0 0 2 0 0 23 1 2444.1464 P49792 P49792 1563 1585 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 3 0.00043041 64.538 By MS/MS By MS/MS 1 2 19322000 10680000 8642300 761 1730 848 1960;1961;1962 1846;1847 1846 3260;3261 2 CVLPEEDSGELAKPK GKTYGLWKCVLPEEDS SGELAKPKIGFPETTE K C V P K I 1 0 0 1 1 0 3 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 15 1 1670.8185 Q9Y3F4 Q9Y3F4 305 319 STRAP Serine-threonine kinase receptor-associated protein yes yes 2 0.005027 66.595 By MS/MS By matching 1 1 4598500 2332000 2266400 762 2908 849 1963;1964 1848 1848 6052 1 CVSAPDLTIEK LLSTQNNRCVSAPDLT APDLTIEKRLPFSSLS R C V E K R 1 0 0 1 1 0 1 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 11 0 1231.6118 Q8NCN4 Q8NCN4 337 347 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 2 0.0044801 77.74 By MS/MS By MS/MS 1 1 3503200 2202800 1300400 763 2338 850 1965;1966 1849;1850 1850 4686 2 CVSVQTDPTDEIPTK KEGSRKSRCVSVQTDP PTDEIPTKKSKKHKKH R C V T K K 0 0 0 2 1 1 1 0 0 1 0 1 0 0 2 1 3 0 0 2 0 0 15 0 1688.7927 P18583 P18583 92 106 SON Protein SON yes yes 2 0.00036754 102.15 By matching By MS/MS 1 1 11954000 7302800 4651000 764 1600 851 1967;1968 1851 1851 2937 1 CVSVQTDPTDEIPTKK KEGSRKSRCVSVQTDP TDEIPTKKSKKHKKHK R C V K K S 0 0 0 2 1 1 1 0 0 1 0 2 0 0 2 1 3 0 0 2 0 0 16 1 1816.8877 P18583 P18583 92 107 SON Protein SON yes yes 2;3 9.0758E-10 127.29 By MS/MS By MS/MS 2 2 47499000 26535000 20964000 765 1600 852 1969;1970;1971;1972 1852;1853;1854;1855 1855 2937 4 CVWSPLASPSTSILK SPSGMQTRCVWSPLAS SPSTSILKRGLKRSQE R C V L K R 1 0 0 0 1 0 0 0 0 1 2 1 0 0 2 4 1 1 0 1 0 0 15 0 1644.8545 Q5UIP0;H7C2B5 Q5UIP0 2169 2183 RIF1 Telomere-associated protein RIF1 yes no 2 0.00035316 99.481 By MS/MS By MS/MS 1 1 19507000 12560000 6947200 766 2112 853 1973;1974 1856;1857 1856 4170;4171;4172;4173;6886 2 CVWSPLASPSTSILKR SPSGMQTRCVWSPLAS PSTSILKRGLKRSQED R C V K R G 1 1 0 0 1 0 0 0 0 1 2 1 0 0 2 4 1 1 0 1 0 0 16 1 1800.9556 Q5UIP0;H7C2B5 Q5UIP0 2169 2184 RIF1 Telomere-associated protein RIF1 yes no 2;3 0.00079729 68.355 By MS/MS By MS/MS 2 2 16988000 10884000 6104400 767 2112 854 1975;1976;1977;1978 1858;1859;1860;1861 1858 4170;4171;4172;4173;6886 4 CYEMASHLR HGGLINKKCYEMASHL YEMASHLRRSQY____ K C Y L R R 1 1 0 0 1 0 1 0 1 0 1 0 1 0 0 1 0 0 1 0 0 0 9 0 1165.5008 P07737;K7EJ44;CON__P02584 P07737 128 136 PFN1 Profilin-1 yes no 3 0.025925 52.278 By MS/MS 1 0 0 0 768 1538 855 1979 1862 1862 1 CYEVGQALYGAPSQAPLPHSR HPPFLHARCYEVGQAL QAPLPHSRSFTAPPVS R C Y S R S 3 1 0 0 1 2 1 2 1 0 2 0 0 0 3 2 0 0 2 1 0 0 21 0 2300.1008 Q96HB5 Q96HB5 594 614 CCDC120 Coiled-coil domain-containing protein 120 yes yes 3 0.0026281 55.453 By MS/MS By matching 1 1 6848900 4510500 2338500 769 2499 856 1980;1981 1863;1864 1864 7841 2 CYGGSFAQR EANLVPPKCYGGSFAQ YGGSFAQRNLCNDDGG K C Y Q R N 1 1 0 0 1 1 0 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 9 0 1044.4447 P42684 P42684 717 725 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0018978 95.909 By MS/MS By matching 1 1 5336400 2823000 2513400 770 1699 857 1982;1983 1865 1865 7603 1 DAELQSKPQDGVSNNNEIQKK KHDCLFPKDAELQSKP NNNEIQKKATMGQLQN K D A K K A 1 0 3 2 0 3 2 1 0 1 1 3 0 0 1 2 0 0 0 1 0 0 21 2 2341.151 D6RCP5;Q8N264 D6RCP5 247 267 ARHGAP24 Rho GTPase-activating protein 24 yes no 3 0.011918 57.173 By MS/MS 1 0 0 0 771 666 858 1984 1866 1866 1192 1 DAEPPSPTPAGPPR PRYMSCLRDAEPPSPT PTPAGPPRCPWQDDAF R D A P R C 2 1 0 1 0 0 1 1 0 0 0 0 0 0 6 1 1 0 0 0 0 0 14 0 1387.6732 O43306 O43306 49 62 ADCY6 Adenylate cyclase type 6 yes yes 2 0.015454 58.626 By MS/MS By matching 1 1 12585000 8331200 4254100 772 1378 859 1985;1986 1867 1867 2523 1 DAEYIYPSLESDDDDPALK DSLGACFKDAEYIYPS DDDDPALKSRPKKKKN K D A L K S 2 0 0 5 0 0 2 0 0 1 2 1 0 0 2 2 0 0 2 0 0 0 19 0 2154.9481 Q9UPP1;H0Y3N9;H0Y589 Q9UPP1 847 865 PHF8 Histone lysine demethylase PHF8 yes no 2 3.7845E-06 94.61 By MS/MS By MS/MS 1 1 67251000 33418000 33832000 773 2868 860 1987;1988 1868;1869 1869 5909 2 DAGDPSPPNK ________________ GDPSPPNKMLRRSDSP R D A N K M 1 0 1 2 0 0 0 1 0 0 0 1 0 0 3 1 0 0 0 0 0 0 10 0 996.45124 A0A0A0MRT2;Q9BTA9;E9PMZ7;C9JMU2;C9JVK6;C9JD58;J3QTA0 A0A0A0MRT2 3 12 WAC WW domain-containing adapter protein with coiled-coil yes no 2 0.0042221 80.455 By MS/MS By matching 1 1 6752400 4198700 2553700 774 200 861 1989;1990 1870;1871 1871 363 2 DAGGPRPESPVPAGR ________________ ESPVPAGRASLEEPPD R D A G R A 2 2 0 1 0 0 1 3 0 0 0 0 0 0 4 1 0 0 0 1 0 0 15 1 1461.7324 E9PS47;E9PLE4;Q9BVG9 E9PS47 8 22 PTDSS2 Phosphatidylserine synthase 2 yes no 2;3 0.00010862 106.31 By MS/MS By MS/MS 2 2 137260000 69129000 68133000 775 822 862 1991;1992;1993;1994 1872;1873;1874;1875 1874 1469 4 DAGQISGLNVLR DSQRQATKDAGQISGL ISGLNVLRVINEPTAA K D A L R V 1 1 1 1 0 1 0 2 0 1 2 0 0 0 0 1 0 0 0 1 0 0 12 0 1241.6728 P38646 P38646 207 218 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0026338 95.483 By MS/MS By MS/MS 1 1 4586400 2616700 1969700 776 1680 863 1995;1996 1876;1877 1877 2 DAGTIAGLNVLR DSQRQATKDAGTIAGL IAGLNVLRIINEPTAA K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1198.667 P11142;E9PKE3;E9PN89;E9PQQ4;E9PQK7;E9PLF4;E9PI65;E9PK54 P11142 160 171 HSPA8 Heat shock cognate 71 kDa protein no no 2 1.2714E-08 134.26 By MS/MS By MS/MS 1 1 14402000 7395200 7006800 777 1560;812 864 1997;1998 1878;1879 1879 2 DAGVIAGLNVLR DSQRQATKDAGVIAGL IAGLNVLRIINEPTAA K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 0 0 0 2 0 0 12 0 1196.6877 A0A0G2JIW1;P0DMV9;P0DMV8;Q53FA3;P34931 A0A0G2JIW1 161 172 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like yes no 2 0.0058292 82.831 By MS/MS By MS/MS 1 1 6613800 3631800 2981900 778 320 865 1999;2000 1880;1881 1881 2 DAKEIPSATQSPISK QRPKLEKKDAKEIPSA ATQSPISKKRKKKGFL K D A S K K 2 0 0 1 0 1 1 0 0 2 0 2 0 0 2 3 1 0 0 0 0 0 15 1 1570.8203 Q9BQG0;I3L1L3 Q9BQG0 1153 1167 MYBBP1A Myb-binding protein 1A yes no 3 9.6524E-10 124.25 By MS/MS By MS/MS 1 1 19723000 10088000 9635300 779 2570 866 2001;2002 1882;1883 1883 5184;5185 2 DALGDSLQVPVSPSSTTSSR GHSPSQPRDALGDSLQ PSSTTSSRCSSRDGEF R D A S R C 1 1 0 2 0 1 0 1 0 0 2 0 0 0 2 6 2 0 0 2 0 0 20 0 2002.9807 C9JVY5;Q9Y2D5 C9JVY5 190 209 AKAP2 A-kinase anchor protein 2 yes no 2;3 9.3832E-10 104.17 By MS/MS By MS/MS 2 2 106370000 64339000 42026000 780 611 867 2003;2004;2005;2006 1884;1885;1886 1886 1116 3 DAPISPASIASSSSTPSSK DKTRLLKKDAPISPAS SSSTPSSKSKELSLNE K D A S K S 3 0 0 1 0 0 0 0 0 2 0 1 0 0 3 8 1 0 0 0 0 0 19 0 1788.8741 Q04727;H0Y5S0;H7C4E4 Q04727 288 306 TLE4 Transducin-like enhancer protein 4 yes no 2 0.00011479 79.489 By MS/MS By MS/MS 1 1 32542000 18169000 14374000 781 1851 868 2007;2008 1887;1888;1889;1890 1890 3481 4 DAPTSPASVASSSSTPSSK DKARSLKKDAPTSPAS SSSTPSSKTKDLGHND K D A S K T 3 0 0 1 0 0 0 0 0 0 0 1 0 0 3 8 2 0 0 1 0 0 19 0 1762.8221 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 282 300 TLE3 Transducin-like enhancer protein 3 yes no 2;3 3.9984E-06 98.077 By MS/MS By MS/MS 2 1 114010000 62189000 51824000 782 897 869 2009;2010;2011 1891;1892;1893;1894 1892 1607;6468 4 DAQRLSPIPEEVPK SKKTFLDKDAQRLSPI PIPEEVPKSTLESEKP K D A P K S 1 1 0 1 0 1 2 0 0 1 1 1 0 0 3 1 0 0 0 1 0 0 14 1 1577.8413 Q96T23;H0YER1;H0YCN2 Q96T23 599 612 RSF1 Remodeling and spacing factor 1 yes no 3 0.016993 58.98 By MS/MS 1 0 0 0 783 2544 870 2012 1895 1895 5134 1 DASDDLDDLNFFNQK DEEDTRKKDASDDLDD DLNFFNQKKKKKKTKK K D A Q K K 1 0 2 5 0 1 0 0 0 0 2 1 0 2 0 1 0 0 0 0 0 0 15 0 1755.7588 P20042 P20042 65 79 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 7.1092E-06 116.55 By matching By MS/MS 1 1 8622200 3419100 5203100 784 1607 871 2013;2014 1896 1896 1 DASEETSTSVMQK APWERERRDASEETST TSTSVMQKTPIILSKP R D A Q K T 1 0 0 1 0 1 2 0 0 0 0 1 1 0 0 3 2 0 0 1 0 0 13 0 1411.6137 M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7;Q9H0W8 M0QZH1 51 63 SMG9 Protein SMG9 yes no 2 0.00059622 92.295 By MS/MS 1 0 0 0 785 1293 872 2015 1897 1897 2328 1 DASSQDCYDIPR VDLNKLRKDASSQDCY QDCYDIPRAFPSDRSS K D A P R A 1 1 0 3 1 1 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 12 0 1425.5831 B7Z3B9;Q13480 B7Z3B9 296 307 GAB1 GRB2-associated-binding protein 1 yes no 2 1.0504E-09 145.46 By MS/MS By MS/MS 1 1 36537000 19364000 17173000 786 513 873 2016;2017 1898;1899 1898 7299 2 DASSSPASTASSASSTSLK DKNRLLKKDASSSPAS SASSTSLKSKEMSLHE K D A L K S 4 0 0 1 0 0 0 0 0 0 1 1 0 0 1 9 2 0 0 0 0 0 19 0 1740.8014 Q04724 Q04724 282 300 TLE1 Transducin-like enhancer protein 1 yes yes 2 1.6621E-13 120.6 By MS/MS By MS/MS 1 1 36224000 18060000 18164000 787 1850 874 2018;2019 1900;1901;1902 1900 3479;3480 3 DATNVGDEGGFAPNILENK VIKEKYGKDATNVGDE APNILENKEGLELLKT K D A N K E 2 0 3 2 0 0 2 3 0 1 1 1 0 1 1 0 1 0 0 1 0 0 19 0 1959.9174 P06733 P06733 203 221 ENO1 Alpha-enolase yes yes 2;3 4.7117E-46 165.78 By MS/MS By MS/MS 2 2 55628000 23760000 31868000 788 1532 875 2020;2021;2022;2023 1903;1904;1905 1904 3 DAVTYTEHAK VFLENVIRDAVTYTEH VTYTEHAKRKTVTAMD R D A A K R 2 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 2 0 1 1 0 0 10 0 1133.5353 P62805 P62805 69 78 HIST1H4A Histone H4 yes yes 2 0.027263 82.75 By MS/MS 1 0 0 0 789 1801 876 2024 1906 1906 1 DCCVEPGTELSPTLPHQL PAAGCCCRDCCVEPGT SPTLPHQL________ R D C Q L - 0 0 0 1 2 1 2 1 1 0 3 0 0 0 3 1 2 0 0 1 0 0 18 0 2051.9292 Q14012 Q14012 353 370 CAMK1 Calcium/calmodulin-dependent protein kinase type 1 yes yes 2;3 0.0025137 64.537 By MS/MS By MS/MS 2 2 30565000 17026000 13539000 790 1938 877 2025;2026;2027;2028 1907;1908;1909 1909 3740 3 DCDLQEDACYNCGR GESGHLAKDCDLQEDA DACYNCGRGGHIAKDC K D C G R G 1 1 1 3 3 1 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 14 0 1774.6345 P62633 P62633 66 79 CNBP Cellular nucleic acid-binding protein yes yes 2 0.0021884 87.713 By MS/MS By matching 1 1 3902600 1992400 1910200 791 1797 878 2029;2030 1910 1910 1 DCLIEDSDDEAGQS AWGLQEIRDCLIEDSD SDDEAGQS________ R D C Q S - 1 0 0 4 1 1 2 1 0 1 1 0 0 0 0 2 0 0 0 0 0 0 14 0 1552.5835 H3BSW6;Q2VPK5;H3BPG4 H3BSW6 573 586 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 yes no 2 0.0014661 84.892 By MS/MS By matching 1 1 29392000 15774000 13618000 792 1141 879 2031;2032 1911 1911 2081 1 DCRSPGLLDTTPIR MNEAADSRDCRSPGLL LLDTTPIRGSCTTQRK R D C I R G 0 2 0 2 1 0 0 1 0 1 2 0 0 0 2 1 2 0 0 0 0 0 14 1 1599.8039 Q8IY92 Q8IY92 1466 1479 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 3 0.0016963 73.168 By MS/MS By MS/MS 1 1 2858500 1269200 1589300 793 2287 880 2033;2034 1912;1913 1913 4587 2 DDAMLLK VGEVIVTKDDAMLLKG KDDAMLLKGKGDKAQI K D D L K G 1 0 0 2 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 7 0 804.40514 P10809 P10809 353 359 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.018677 99.384 By matching By MS/MS 1 1 2606700 1297800 1308900 794 1557 881 2035;2036 1914 1914 1 DDDDIDLFGSDDEEESEEAK GSGATDSKDDDDIDLF EEESEEAKRLREERLA K D D A K R 1 0 0 7 0 0 5 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 20 0 2271.8663 P24534;C9JZW3 P24534 97 116 EEF1B2 Elongation factor 1-beta yes no 2 0.01051 66.606 By MS/MS 1 0 0 0 795 1626 882 2037 1915 1915 3004 1 DDDDIDLFGSDDEEESEEAKR GSGATDSKDDDDIDLF EESEEAKRLREERLAQ K D D K R L 1 1 0 7 0 0 5 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 21 1 2427.9674 P24534;C9JZW3 P24534 97 117 EEF1B2 Elongation factor 1-beta yes no 2;3 0.00024412 71.143 By MS/MS By MS/MS 1 2 31414000 15078000 16335000 796 1626 883 2038;2039;2040 1916;1917;1918 1917 3004 3 DDKHGSYEDAVHSGALND IKLHPESKDDKHGSYE VHSGALND________ K D D N D - 2 0 1 4 0 0 1 2 2 0 1 1 0 0 0 2 0 0 1 1 0 0 18 1 1928.8137 F5H282;E7EQR6;P17987 F5H282 315 332 TCP1 T-complex protein 1 subunit alpha yes no 3 0.0070683 53.747 By matching By MS/MS 1 1 25490000 13603000 11886000 797 724 884 2041;2042 1919 1919 1288 1 DDNMFQIGK SKQSSSSRDDNMFQIG DNMFQIGKMRYVSVRD R D D G K M 0 0 1 2 0 1 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 0 9 0 1066.4753 P53999 P53999 60 68 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 2 0.0079869 69.628 By MS/MS 1 0 0 0 798 1765 885 2043 1920 1920 222 1 DDPDGKQEAKPQQAAGMLSPK VSSTLAAKDDPDGKQE AAGMLSPKTGGKEAAS K D D P K T 3 0 0 3 0 3 1 2 0 0 1 3 1 0 3 1 0 0 0 0 0 0 21 2 2210.0637 Q13428;J3KQ96;E7ETY2 Q13428 1239 1259 TCOF1 Treacle protein yes no 3 0.024128 45.436 By MS/MS 1 5215700 5215700 0 799 1915 886 2044 1921 1921 1 DDSHSAEDSEDEKEDHKNVR DKDVKTKKDDSHSAED KEDHKNVRQQRQAASK K D D V R Q 1 1 1 5 0 0 4 0 2 0 0 2 0 0 0 3 0 0 0 1 0 0 20 2 2340.9691 Q9H1E3 Q9H1E3 71 90 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3;4 0.0013179 60.347 By matching By MS/MS 2 2 53029000 8760600 44269000 800 2637 887 2045;2046;2047;2048 1922;1923 1923 5372 2 DDSLDLSPQGR SPSLQHSRDDSLDLSP LDLSPQGRLSDVLKRK R D D G R L 0 1 0 3 0 1 0 1 0 0 2 0 0 0 1 2 0 0 0 0 0 0 11 0 1201.5575 Q14669 Q14669 985 995 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 0.0086341 71.548 By MS/MS By matching 1 1 2385900 1999600 386270 801 1949 888 2049;2050 1924 1924 3760 1 DDTSRYDERPGPSPLPHR VNIRHSGRDDTSRYDE GPSPLPHRDRDRDRER R D D H R D 0 3 0 3 0 0 1 1 1 0 1 0 0 0 4 2 1 0 1 0 0 0 18 2 2093.9879 P08621 P08621 214 231 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 4 0.014046 43.861 By matching By MS/MS 1 1 18928000 7342400 11586000 802 1545 889 2051;2052 1925;1926 1925 2841 2 DEDMLYSPELAQR LDLPPRRRDEDMLYSP YSPELAQRGHDDDVSS R D E Q R G 1 1 0 2 0 1 2 0 0 0 2 0 1 0 1 1 0 0 1 0 0 0 13 0 1565.7032 Q9Y2W2 Q9Y2W2 231 243 WBP11 WW domain-binding protein 11 yes yes 2 1.6045E-10 133.16 By MS/MS By MS/MS 2 2 10229000 5228400 5000600 803 2898 890;891 2053;2054;2055;2056 1927;1928;1929 1927 381 6040 2 DEILPTTPISEQK HVSIVEPKDEILPTTP TTPISEQKGGKPEPPA K D E Q K G 0 0 0 1 0 1 2 0 0 2 1 1 0 0 2 1 2 0 0 0 0 0 13 0 1469.7613 P23396;E9PL09;E9PPU1;H0YEU2;E9PSF4 P23396 215 227 RPS3 40S ribosomal protein S3 yes no 2 4.4233E-63 203.88 By MS/MS By MS/MS 2 2 425400000 213420000 211970000 804 1622 892;893 2057;2058;2059;2060 1930;1931;1932;1933;1934 1934 6685;6686 5 DELILEGNDIELVSNSAALIQQATTVK RPVSQAQKDELILEGN IQQATTVKNKDIRKFL K D E V K N 3 0 2 2 0 2 3 1 0 3 4 1 0 0 0 2 2 0 0 2 0 0 27 0 2883.5077 D6RAN4;H0Y9V9;P32969;H0Y9R4 D6RAN4 137 163 RPL9 60S ribosomal protein L9 yes no 3 0.023102 42.557 By matching By MS/MS 1 1 9288300 4837600 4450700 805 651 894 2061;2062 1935 1935 1 DELTESPKYIQK SHNWGTVKDELTESPK ESPKYIQKQISYNYSD K D E Q K Q 0 0 0 1 0 1 2 0 0 1 1 2 0 0 1 1 1 0 1 0 0 0 12 1 1449.7351 Q8NC51 Q8NC51 229 240 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3 0.0020236 107.79 By MS/MS By MS/MS 2 1 10907000 6311900 4595000 806 2335 895 2063;2064;2065 1936;1937;1938 1938 4673;6961 3 DETNYGIPQR IIMWKLTRDETNYGIP TNYGIPQRALRGHSHF R D E Q R A 0 1 1 1 0 1 1 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 10 0 1191.552 D6RAU2;E9PD14;D6RFX4;D6RFZ9;D6RHH4;D6R9Z1;D6R9L0;P63244;D6RGK8;D6R909;D6RBD0;D6RAC2;D6REE5 D6RAU2 48 57 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 3.5319E-05 143.01 By MS/MS By MS/MS 1 1 7688900 2710600 4978300 807 645 896 2066;2067 1939;1940 1940 2 DFLNRYPR AELMQDTRDFLNRYPR DFLNRYPRKKFWVGKP R D F P R K 0 2 1 1 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 8 1 1079.5512 Q12899 Q12899 259 266 TRIM26 Tripartite motif-containing protein 26 yes yes 2 0.028894 49.59 By matching By MS/MS 1 1 3707800 2476200 1231600 808 1883 897 2068;2069 1941 1941 7677 0 DFNLPEYDLNVEER KFKAHDKKDFNLPEYD YDLNVEERLVLIEKSV K D F E R L 0 1 2 2 0 0 3 0 0 0 2 0 0 1 1 0 0 0 1 1 0 0 14 0 1751.8002 Q96RT1 Q96RT1 727 740 ERBB2IP Protein LAP2 yes yes 2 0.00069903 88.021 By MS/MS 1 12571000 12571000 0 809 2536 898 2070 1942 1942 7856 1 DFQDYMEPEEGCQGSPQRR ELERKFVKDFQDYMEP CQGSPQRRGPLTSGSD K D F R R G 0 2 0 2 1 3 3 2 0 0 0 0 1 1 2 1 0 0 1 0 0 0 19 1 2327.9535 O43237;H3BUM4;B4E2E0 O43237 180 198 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 3 0.0051179 50.077 By MS/MS By MS/MS 1 1 26376000 16099000 10277000 810 1374 899 2071;2072 1943;1944 1943 2515 2 DFQEYVEPGEDFPASPQR QMEQKLIRDFQEYVEP DFPASPQRRNTASQED R D F Q R R 1 1 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 18 0 2109.928 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 193 210 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2;3 1.4348E-19 135.09 By MS/MS By MS/MS 2 3 29835000 13725000 16110000 811 2947 900 2073;2074;2075;2076;2077 1945;1946;1947;1948;1949;1950;1951 1945 6122 7 DFQEYVEPGEDFPASPQRR QMEQKLIRDFQEYVEP FPASPQRRNTASQEDK R D F R R N 1 2 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 19 1 2266.0291 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 193 211 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2;3 1.5944E-07 106.82 By MS/MS By MS/MS 2 2 238500000 143910000 94590000 812 2947 901 2078;2079;2080;2081 1952;1953;1954;1955;1956;1957;1958 1956 6122 7 DFQHLISSPLKK TRRKKRKKDFQHLISS LISSPLKKSRICDETA K D F K K S 0 0 0 1 0 1 0 0 1 1 2 2 0 1 1 2 0 0 0 0 0 0 12 1 1411.7823 Q15361 Q15361 58 69 TTF1 Transcription termination factor 1 yes yes 3 0.0011686 77.124 By MS/MS By MS/MS 1 1 5635900 2854000 2781800 813 1983 902 2082;2083 1959;1960 1959 3868 2 DFSASYFSGEQEVTPSR SQRTPIRRDFSASYFS EQEVTPSRSTLQIGKR R D F S R S 1 1 0 1 0 1 2 1 0 0 0 0 0 2 1 4 1 0 1 1 0 0 17 0 1905.8381 P49454 P49454 240 256 CENPF Centromere protein F yes yes 2 0.0012964 73.498 By MS/MS By matching 1 1 4997400 2663600 2333800 814 1724 903 2084;2085 1961 1961 3229 1 DFSLEQLR SLPRMKKRDFSLEQLR DFSLEQLRQYDGSRNP R D F L R Q 0 1 0 1 0 1 1 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 1006.5084 O15173 O15173 102 109 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 2 0.0060599 104.21 By MS/MS By MS/MS 1 1 3149500 1648500 1501000 815 1363 904 2086;2087 1962;1963 1962 2491 2 DFSLRMEKYR TAVDKRYRDFSLRMEK SLRMEKYRTSLEKALG R D F Y R T 0 2 0 1 0 0 1 0 0 0 1 1 1 1 0 1 0 0 1 0 0 0 10 2 1343.6656 E7EWP2;E7EPJ7;O75962;F5H228 E7EWP2 1171 1180 TRIO Triple functional domain protein yes no 2 0.020636 49.813 By MS/MS 1 1615700 1615700 0 816 713 905 2088 1964 1964 7353 0 DFSPEALKK LMEVCKEKDFSPEALK FSPEALKKANITFEYM K D F K K A 1 0 0 1 0 0 1 0 0 0 1 2 0 1 1 1 0 0 0 0 0 0 9 1 1033.5444 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RJT0 A0A087WZK9 178 186 EIF3H Eukaryotic translation initiation factor 3 subunit H yes no 2 0.011775 84.817 By MS/MS By MS/MS 1 1 5528200 2529400 2998800 817 113 906 2089;2090 1965;1966 1965 205 2 DFTEVLSPNMYNSK IREEYHKRDFTEVLSP SPNMYNSKLWEASGHW R D F S K L 0 0 2 1 0 0 1 0 0 0 1 1 1 1 1 2 1 0 1 1 0 0 14 0 1643.7501 B7ZLP8;A2RTX5 B7ZLP8 447 460 TARSL2 Probable threonine--tRNA ligase 2, cytoplasmic yes no 3 0.02723 41.825 By MS/MS 1 0 0 0 818 400 907 2091 1967 1967 7258 1 DFTPVCTTELGR GILFSHPRDFTPVCTT VCTTELGRAAKLAPEF R D F G R A 0 1 0 1 1 0 1 1 0 0 1 0 0 1 1 0 3 0 0 1 0 0 12 0 1394.65 P30041 P30041 42 53 PRDX6 Peroxiredoxin-6 yes yes 2 1.3707E-06 123.75 By MS/MS By MS/MS 1 2 9519600 3217500 6302100 819 1650 908;909 2092;2093;2094 1968;1969;1970 1968 2 DGADFAKWR ERCAQYKKDGADFAKW GADFAKWRCVLKIGEH K D G W R C 2 1 0 2 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 9 1 1064.5039 J3KPS3;P04075;H3BQN4;H3BUH7;H3BR04;H3BPS8;H3BMQ8;H3BU78;K7EKH5;C9J8F3;J3KSV6;J3QKP5;A8MVZ9;P09972 J3KPS3 141 149 ALDOA;ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase C yes no 2 0.007926 97.635 By MS/MS By MS/MS 1 1 17342000 10452000 6889600 820 1232 910 2095;2096 1971;1972 1972 2 DGDKSPMSSLQISNEK EEEAAAGKDGDKSPMS SLQISNEKNLEPGKQI K D G E K N 0 0 1 2 0 1 1 1 0 1 1 2 1 0 1 4 0 0 0 0 0 0 16 1 1734.8094 Q9UER7 Q9UER7 491 506 DAXX Death domain-associated protein 6 yes yes 3 0.0043314 59.574 By MS/MS By matching 1 1 6524700 3769800 2754900 821 2807 911 2097;2098 1973 1973 5751 1 DGEEYEWKETAR EMDELCYRDGEEYEWK YEWKETARWLKFEEDV R D G A R W 1 1 0 1 0 0 4 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 12 1 1511.6529 E9PFN4;A0A0A0MST8;C9JRP1;Q9Y6M7 C9JRP1 123 134 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 no no 2 0.0011939 96.171 By matching By MS/MS 1 1 10737000 4604200 6133100 822 606;782 912 2099;2100 1974 1974 7324 1 DGEGTEEGEK DGDSSPTKDGEGTEEG EGTEEGEKDEKSESED K D G E K D 0 0 0 1 0 0 4 3 0 0 0 1 0 0 0 0 1 0 0 0 0 0 10 0 1049.4149 P23470 P23470 573 582 PTPRG Receptor-type tyrosine-protein phosphatase gamma yes yes 1 0.0062987 65.695 By MS/MS By matching 1 1 16514000 15874000 639870 823 1624 913 2101;2102 1975 1975 6688 1 DGELPVEDDIDLSDVELDDLGKDEL EREPWDGRDGELPVED DDLGKDEL________ R D G E L - 0 0 0 8 0 0 4 2 0 1 5 1 0 0 1 1 0 0 0 2 0 0 25 1 2757.2604 Q15084 Q15084 416 440 PDIA6 Protein disulfide-isomerase A6 yes yes 2;3 4.2439E-10 89.946 By MS/MS By matching 2 1 110780000 104190000 6594500 824 1977 914 2103;2104;2105 1976;1977 1977 3851 2 DGEQSPNVSLMQR RPESERERDGEQSPNV PNVSLMQRMSDMLSRW R D G Q R M 0 1 1 1 0 2 1 1 0 0 1 0 1 0 1 2 0 0 0 1 0 0 13 0 1459.6725 Q58WW2;F2Z305 Q58WW2 332 344 DCAF6 DDB1- and CUL4-associated factor 6 yes no 2 0.00015519 113.76 By MS/MS By MS/MS 2 2 47153000 22959000 24194000 825 2064 915;916 2106;2107;2108;2109 1978;1979;1980 1980 279 4052 3 DGFYPAPDFR ________________ FYPAPDFRDREAEDMA R D G F R D 1 1 0 2 0 0 0 1 0 0 0 0 0 2 2 0 0 0 1 0 0 0 10 0 1183.5298 P23443;K7EMM2;K7ER06 P23443 8 17 RPS6KB1 Ribosomal protein S6 kinase beta-1 yes no 2 0.025313 53.756 By MS/MS 1 1235200 0 1235200 826 1623 917 2110 1981 1981 7579 1 DGGSGNSTIIVSR LIDELLERDGGSGNST NSTIIVSRSGEDESQE R D G S R S 0 1 1 1 0 0 0 3 0 2 0 0 0 0 0 3 1 0 0 1 0 0 13 0 1261.6262 Q7Z6Z7 Q7Z6Z7 2359 2371 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 8.8113E-08 127.79 By MS/MS By MS/MS 2 2 24487000 11949000 12539000 827 2226 918;919 2111;2112;2113;2114 1982;1983;1984;1985 1983 4457;4458 4 DGGYSEPR NLFMGSEKDGGYSEPR DGGYSEPRSRHRTPAW K D G P R S 0 1 0 1 0 0 1 2 0 0 0 0 0 0 1 1 0 0 1 0 0 0 8 0 879.37226 F6S1J4 F6S1J4 234 241 C16orf62 yes yes 1 0.028614 42.109 By MS/MS By matching 1 1 3185000 1384000 1801000 828 902 920 2115;2116 1986 1986 7406 0 DGKFSPIQEK ENMVVPSRDGKFSPIQ KFSPIQEKSPKQALSS R D G E K S 0 0 0 1 0 1 1 1 0 1 0 2 0 1 1 1 0 0 0 0 0 0 10 1 1147.5873 O43683 O43683 651 660 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 2 0.00019426 114.7 By MS/MS By matching 1 1 10795000 5218100 5576600 829 1391 921 2117;2118 1987 1987 2552 1 DGLNDDDFEPYLSPQAR QNGSVHQKDGLNDDDF PYLSPQARPNNAYTAM K D G A R P 1 1 1 4 0 1 1 1 0 0 2 0 0 1 2 1 0 0 1 0 0 0 17 0 1950.8595 S4R3J8;Q9Y5A9 S4R3J8 27 43 YTHDF2 YTH domain-containing family protein 2 yes no 2;3 2.4344E-25 154.49 By MS/MS By MS/MS 2 3 34679000 15381000 19298000 830 2927 922 2119;2120;2121;2122;2123 1988;1989;1990;1991 1990 6081;7958 4 DGLNQTTIPVSPPSTTKPSR IEDSSVQKDGLNQTTI PSTTKPSRASTASPCN K D G S R A 0 1 1 1 0 1 0 1 0 1 1 1 0 0 4 3 4 0 0 1 0 0 20 1 2095.0909 Q71RC2;X6RLN4 Q71RC2 573 592 LARP4 La-related protein 4 yes no 3 0.00052009 71.742 By MS/MS By MS/MS 1 1 16411000 8129100 8282000 831 2193 923 2124;2125 1992;1993 1993 4367 2 DGQDAIAQSPEKESK DSEASKPKDGQDAIAQ QSPEKESKDYEMNANH K D G S K D 2 0 0 2 0 2 2 1 0 1 0 2 0 0 1 2 0 0 0 0 0 0 15 1 1601.7533 Q9NWH9;H0YL55;H7BXE3 Q9NWH9 281 295 SLTM SAFB-like transcription modulator yes no 2;3 0.0013332 68.129 By matching By MS/MS 2 2 22499000 9633000 12866000 832 2744 924 2126;2127;2128;2129 1994;1995 1994 5617 1 DGQVINETSQHHDDLE LIKTVETRDGQVINET SQHHDDLE________ R D G L E - 0 0 1 3 0 2 2 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 16 0 1835.7922 P08670 P08670 451 466 VIM Vimentin yes yes 2;3 0.00015826 102.39 By MS/MS By MS/MS 3 3 171770000 83676000 88097000 833 1546 925;926 2130;2131;2132;2133;2134;2135 1996;1997;1998;1999;2000 1998 2842;6662 5 DGRASVHSMITR SKFLLMVRDGRASVHS SVHSMITRKVTIAGFD R D G T R K 1 2 0 1 0 0 0 1 1 1 0 0 1 0 0 2 1 0 0 1 0 0 12 1 1328.6619 O60704 O60704 184 195 TPST2 Protein-tyrosine sulfotransferase 2 yes yes 2 0.013874 53.597 By MS/MS 1 8977900 8977900 0 834 1417 927 2136 2001 2001 170 1 DGSLASNPYSGDLTK PTTPLTGRDGSLASNP PYSGDLTKFGRGDASS R D G T K F 1 0 1 2 0 0 0 2 0 0 2 1 0 0 1 3 1 0 1 0 0 0 15 0 1523.7104 F8W726;Q14157;H0Y5H6;H7C2T8 F8W726 861 875 UBAP2L Ubiquitin-associated protein 2-like yes no 2 4.2466E-06 113.24 By MS/MS By MS/MS 2 2 13550000 7133100 6417000 835 937 928 2137;2138;2139;2140 2002;2003;2004;2005 2004 1682;6476;7415 4 DGSLNQSSGYR ATKLTEERDGSLNQSS LNQSSGYRYGTDPTPQ R D G Y R Y 0 1 1 1 0 1 0 2 0 0 1 0 0 0 0 3 0 0 1 0 0 0 11 0 1182.5265 P06241;E5RJX7;E5RHX7;E5RFM6;E5RK23;E5RFM4;E5RHF7;E5RGM6;E5RI25;E5RFM0;E5RGT0;E5RH71;E5RIX5;E5RFS5 P06241 19 29 FYN Tyrosine-protein kinase Fyn yes no 2 0.0016772 95.094 By MS/MS By MS/MS 2 2 14339000 6732000 7607300 836 1529 929 2141;2142;2143;2144 2006;2007;2008;2009 2008 2817 4 DGSSPPLLEK KTAVQDRKDGSSPPLL SSPPLLEKQTVTKDVT K D G E K Q 0 0 0 1 0 0 1 1 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 0 1041.5342 H7BYY2;Q6W2J9 H7BYY2 420 429 BCOR BCL-6 corepressor yes no 2 0.0011779 105.36 By MS/MS By MS/MS 1 1 28341000 16248000 12093000 837 1155 930 2145;2146 2010;2011;2012 2012 2101 3 DGTAPPPQSPGSPGTGQDEEWSDEESPR LTSIVPTRDGTAPPPQ WSDEESPRKAATGVRV R D G P R K 1 1 0 3 0 2 4 4 0 0 0 0 0 0 6 4 2 1 0 0 0 0 28 0 2909.2224 Q9UKS6;A0A0C4DGG1 Q9UKS6 333 360 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 3 0.0021449 50.498 By MS/MS By matching 1 1 12297000 7140900 5156200 838 2835 931 2147;2148 2013 2013 5835 1 DGTSFGEYGGWYK EECKGKQKDGTSFGEY GEYGGWYKACKVDSPT K D G Y K A 0 0 0 1 0 0 1 4 0 0 0 1 0 1 0 1 1 1 2 0 0 0 13 0 1465.615 H0YG16;G3V5R9;G3V3H3;H0YJU9;H0YJL0;H0YJT3;G5E9S8;G3V2E7;F8W6L3;E7EVH7;Q07866 H0YG16 48 60 KLC1 Kinesin light chain 1 yes no 2 0.024027 50.791 By matching By MS/MS 1 1 6142700 3416100 2726700 839 1071 932 2149;2150 2014 2014 7446 1 DGVNKDYEETELISTTANYR RDRAKERRDGVNKDYE ISTTANYRAVGPTA__ R D G Y R A 1 1 2 2 0 0 3 1 0 1 1 1 0 0 0 1 3 0 2 1 0 0 20 1 2317.071 D6RAY9;D6REL4;E7EQZ7;Q13123 D6RAY9 115 134 IK Protein Red yes no 3 1.5184E-34 141.07 By MS/MS By MS/MS 1 1 17236000 8121700 9114100 840 654 933 2151;2152 2015;2016 2016 7343 2 DHANYEEDENGDITPIK GKKFARKRDHANYEED NGDITPIKAKKMFLKP R D H I K A 1 0 2 3 0 0 3 1 1 2 0 1 0 0 1 0 1 0 1 0 0 0 17 0 1958.8494 H3BSB3;H3BNT4;Q99547 H3BSB3 105 121 MPHOSPH6 M-phase phosphoprotein 6 yes no 3 0.018322 51.431 By matching By MS/MS 1 1 6891800 4039300 2852500 841 1121 934 2153;2154 2017 2017 6540 1 DHANYEEDENGDITPIKAK GKKFARKRDHANYEED DITPIKAKKMFLKPQD R D H A K K 2 0 2 3 0 0 3 1 1 2 0 2 0 0 1 0 1 0 1 0 0 0 19 1 2157.9815 H3BSB3;H3BNT4;Q99547 H3BSB3 105 123 MPHOSPH6 M-phase phosphoprotein 6 yes no 3 0.00097418 70.391 By MS/MS By matching 1 1 17611000 10054000 7557100 842 1121 935 2155;2156 2018 2018 6540 1 DHSPTPSVFNSDEER TRERERERDHSPTPSV VFNSDEERYRYREYAE R D H E R Y 0 1 1 2 0 0 2 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 15 0 1715.7387 Q6UN15 Q6UN15 490 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 2;3 1.0702E-06 118.23 By MS/MS By MS/MS 2 2 33309000 15556000 17752000 843 2168 936;937 2157;2158;2159;2160 2019;2020;2021 2020 4325;4326;4327;6918 3 DHTSGSKLTQLKIAQR GVISSLLKDHTSGSKL TQLKIAQRLRLDQPKL K D H Q R L 1 1 0 1 0 2 0 1 1 1 2 2 0 0 0 2 2 0 0 0 0 0 16 2 1781.9748 Q8NDT2 Q8NDT2 753 768 RBM15B Putative RNA-binding protein 15B yes yes 3 0.025783 46.797 By matching By MS/MS 1 1 3782500 2089100 1693300 844 2345 938 2161;2162 2022 2022 0 DHTVSGDEDYCPR YRFNHHCKDHTVSGDE GDEDYCPRSKKANLGK K D H P R S 0 1 0 3 1 0 1 1 1 0 0 0 0 0 1 1 1 0 1 1 0 0 13 0 1549.6103 Q9UIG0 Q9UIG0 943 955 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.0025551 84.169 By MS/MS By MS/MS 1 1 6267400 3386400 2881000 845 2817 939 2163;2164 2023;2024 2024 5788 2 DIDEVSSLLR CCSAKNLRDIDEVSSL DEVSSLLRTSIMSKQY R D I L R T 0 1 0 2 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1145.5928 P50990;H7C4C8 P50990 156 165 CCT8 T-complex protein 1 subunit theta yes no 2 0.0011599 108.74 By MS/MS By MS/MS 1 1 4580800 2367800 2213000 846 1741 940 2165;2166 2025;2026 2026 2 DIDISSPEFK VTGREGAKDIDISSPE DISSPEFKIKIPRHEL K D I F K I 0 0 0 2 0 0 1 0 0 2 0 1 0 1 1 2 0 0 0 0 0 0 10 0 1149.5554 Q09666 Q09666 172 181 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.00087248 107.34 By MS/MS By MS/MS 1 1 13638000 7295100 6342800 847 1871 941 2167;2168 2027;2028 2028 3532;3533 2 DIDNNLITSTPR SKRSRIERDIDNNLIT NLITSTPRAGEKPNKQ R D I P R A 0 1 2 2 0 0 0 0 0 2 1 0 0 0 1 1 2 0 0 0 0 0 12 0 1357.6838 H0YMH7;Q05D32;H0YNU2;H0YNW9 H0YMH7 77 88 CTDSPL2 CTD small phosphatase-like protein 2 yes no 2 0.0039712 95.195 By MS/MS By MS/MS 1 1 5861000 3185300 2675700 848 1100 942 2169;2170 2029;2030;2031 2031 6533 3 DIDPQNDLTFLR MKAKSTVRDIDPQNDL QNDLTFLRIRSKKHEI R D I L R I 0 1 1 3 0 1 0 0 0 1 2 0 0 1 1 0 1 0 0 0 0 0 12 0 1445.7151 H3BQI1;B1AKR6;Q9NP97;Q8TF09 H3BQI1 88 99 DYNLRB2;DYNLRB1 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 2 0.0045922 87.298 By MS/MS 1 0 0 0 849 458 943 2171 2032 2032 1 DIEISTEEEKDTGDLK SEASKENRDIEISTEE EKDTGDLKDSSLLKTK R D I L K D 0 0 0 3 0 0 4 1 0 2 1 2 0 0 0 1 2 0 0 0 0 0 16 1 1820.8527 Q4G0J3 Q4G0J3 333 348 LARP7 La-related protein 7 yes yes 2 0.0010318 80.719 By MS/MS By MS/MS 2 2 53447000 28041000 25406000 850 2046 944;945 2172;2173;2174;2175 2033;2034;2035 2033 4000 3 DIEISTEEEKDTGDLKDSSLLK SEASKENRDIEISTEE LKDSSLLKTKRKHKKK R D I L K T 0 0 0 4 0 0 4 1 0 2 3 3 0 0 0 3 2 0 0 0 0 0 22 2 2464.2068 Q4G0J3 Q4G0J3 333 354 LARP7 La-related protein 7 yes yes 3 0.021779 56.719 By MS/MS By matching 1 1 17513000 9061000 8451700 851 2046 946 2176;2177 2036 2036 4000 1 DIEVLSEDTDYEEDEVTK KSPERLRKDIEVLSED YEEDEVTKKRKDVKKD K D I T K K 0 0 0 4 0 0 5 0 0 1 1 1 0 0 0 1 2 0 1 2 0 0 18 0 2127.9219 H0Y7Y8;H7C5R6;Q4LE39 H0Y7Y8 185 202 ARID4B AT-rich interactive domain-containing protein 4B yes no 2 4.5133E-13 120.84 By MS/MS By MS/MS 1 2 41040000 25208000 15832000 852 1037 947;948 2178;2179;2180 2037;2038;2039 2037 1926;6518 3 DIEVLSEDTDYEEDEVTKK KSPERLRKDIEVLSED EEDEVTKKRKDVKKDT K D I K K R 0 0 0 4 0 0 5 0 0 1 1 2 0 0 0 1 2 0 1 2 0 0 19 1 2256.0169 H0Y7Y8;H7C5R6;Q4LE39 H0Y7Y8 185 203 ARID4B AT-rich interactive domain-containing protein 4B yes no 3 0.00036581 71.929 By MS/MS By MS/MS 1 1 17495000 10032000 7462800 853 1037 949 2181;2182 2040;2041 2041 1926;6518 2 DIIRQPSEEEIIK IPSAKKYKDIIRQPSE PSEEEIIKLAPPPKKA K D I I K L 0 1 0 1 0 1 3 0 0 4 0 1 0 0 1 1 0 0 0 0 0 0 13 1 1568.841 B1AKZ5;Q15121 B1AKZ5 88 100 PEA15 Astrocytic phosphoprotein PEA-15 yes no 2;3 1.8744E-10 134.88 By MS/MS By MS/MS 2 2 354700000 205160000 149540000 854 459 950 2183;2184;2185;2186 2042;2043;2044;2045 2043 887 4 DIISIAEDEDLR FDISLFYRDIISIAED IAEDEDLRVHFEESSK R D I L R V 1 1 0 3 0 0 2 0 0 3 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1387.6831 B1AHC9;P12956 B1AHC9 169 180 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.0023925 97.456 By MS/MS By MS/MS 1 1 2338300 1515600 822740 855 451 951 2187;2188 2046;2047 2046 2 DIKEESDEEEEDDEESGR METLELQKDIKEESDE EDDEESGRLRFKTERK K D I G R L 0 1 0 4 0 0 8 1 0 1 0 1 0 0 0 2 0 0 0 0 0 0 18 1 2138.8247 Q96EV2;H7BXM6;A8MTF7;H7C0H2 Q96EV2 200 217 RBM33 RNA-binding protein 33 yes no 3 0.0031307 66.068 By MS/MS 1 0 0 0 856 2480 952 2189 2048 2048 5002 1 DILCATLSCKQNGIR AENPSWTKDILCATLS SCKQNGIRHLILSAIQ K D I I R H 1 1 1 1 2 1 0 1 0 2 2 1 0 0 0 1 1 0 0 0 0 0 15 1 1747.8709 F5H7B7;A0A0A0MT16;Q86UQ4 F5H7B7 260 274 ABCA13 ATP-binding cassette sub-family A member 13 yes no 2 0.0021183 67.385 By MS/MS By matching 1 1 5333700 3255100 2078600 857 233 953 2190;2191 2049 2049 1 DILIVVGNEIIEAPMAWR GLYSAMPRDILIVVGN IEAPMAWRSRFFEYRA R D I W R S 2 1 1 1 0 0 2 1 0 4 1 0 1 0 1 0 0 1 0 2 0 0 18 0 2038.0921 H0YMX4;P50440 H0YMX4 97 114 GATM Glycine amidinotransferase, mitochondrial yes no 2;3 1.7562E-27 144.27 By MS/MS By MS/MS 3 3 81264000 45130000 36134000 858 1101 954;955 2192;2193;2194;2195;2196;2197 2050;2051;2052;2053;2054;2055 2054 130 6 DILKEMFPYEASTPTGISASCR TEERRVERDILKEMFP TGISASCRRPIKGAAG R D I C R R 2 1 0 1 1 0 2 1 0 2 1 1 1 1 2 3 2 0 1 0 0 0 22 1 2472.1665 G5E972;P42167;H0YJH7 G5E972 303 324 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3 0.0081006 52.541 By matching By MS/MS 1 1 8035700 4232300 3803400 859 990 956 2198;2199 2056 2056 115 1807;6498;7427 1 DINAYNCEEPTEKLPFPIIDDR EDHLAWSKDINAYNCE PFPIIDDRNRELAILL K D I D R N 1 1 2 3 1 0 3 0 0 3 1 1 0 1 3 0 1 0 1 0 0 0 22 1 2648.2428 P30041 P30041 85 106 PRDX6 Peroxiredoxin-6 yes yes 3 2.5649E-06 83.395 By MS/MS By MS/MS 2 2 19529000 8852900 10676000 860 1650 957;958 2200;2201;2202;2203 2057;2058;2059;2060 2059 7587 4 DINSLYDVSR LERYNMERDINSLYDV NSLYDVSRMYVDPSEI R D I S R M 0 1 1 2 0 0 0 0 0 1 1 0 0 0 0 2 0 0 1 1 0 0 10 0 1180.5724 A0A0A0MRF9;P16885 A0A0A0MRF9 748 757 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 2 1.8523E-05 121.6 By MS/MS By MS/MS 1 1 17274000 7102400 10171000 861 183 959 2204;2205 2061;2062 2062 325;7195 2 DINTFLGTPVQK KPAVGEEKDINTFLGT FLGTPVQKLDQPGNLP K D I Q K L 0 0 1 1 0 1 0 1 0 1 1 1 0 1 1 0 2 0 0 1 0 0 12 0 1331.7085 P46013 P46013 1794 1805 MKI67 Antigen KI-67 yes yes 2 0.0018506 109.15 By MS/MS 1 1031000 1031000 0 862 1704 960 2206 2063 2063 6702 1 DINTFVGTPVEK KAAVGEEKDINTFVGT FVGTPVEKLDLLGNLP K D I E K L 0 0 1 1 0 0 1 1 0 1 0 1 0 1 1 0 2 0 0 2 0 0 12 0 1318.6769 P46013 P46013 1916 1927 MKI67 Antigen KI-67 yes yes 2 0.010694 88.706 By MS/MS By matching 1 1 5690000 3057200 2632800 863 1704 961 2207;2208 2064 2064 1 DIQRPDSEHGLSPDSENFDWK EDLTLDLKDIQRPDSE DSENFDWKAIQEGANS K D I W K A 0 1 1 4 0 1 2 1 1 1 1 1 0 1 2 3 0 1 0 0 0 0 21 1 2471.0989 P25054 P25054 2082 2102 APC Adenomatous polyposis coli protein yes yes 3 0.015857 45.436 By MS/MS 1 3199400 3199400 0 864 1628 962 2209 2065 2065 3011 1 DISGPSPSKK FVCDINEKDISGPSPS SGPSPSKKLKKSQCTP K D I K K L 0 0 0 1 0 0 0 1 0 1 0 2 0 0 2 3 0 0 0 0 0 0 10 1 1014.5346 S4R3D6;Q96GX9 S4R3D6 35 44 APIP Methylthioribulose-1-phosphate dehydratase yes no 2 0.0035318 101.56 By MS/MS By MS/MS 1 1 19129000 7582200 11547000 865 2493 963 2210;2211 2066;2067 2067 5021 2 DISLSDYK VMPDGQFKDISLSDYK DISLSDYKGKYVVFFF K D I Y K G 0 0 0 2 0 0 0 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 8 0 939.45493 A0A0A0MSI0;Q06830 A0A0A0MSI0 28 35 PRDX1 Peroxiredoxin-1 yes no 2 0.017584 89.142 By MS/MS By matching 1 1 4176800 1948100 2228700 866 214 964 2212;2213 2068 2068 1 DISSSLNSLADSNAR VVCLFRRRDISSSLNS SLADSNAREFEEESKQ R D I A R E 2 1 2 2 0 0 0 0 0 1 2 0 0 0 0 5 0 0 0 0 0 0 15 0 1548.738 O94776 O94776 50 64 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.00038615 91.657 By MS/MS By MS/MS 1 1 5959900 2747200 3212700 867 1460 965 2214;2215 2069;2070 2070 2698;2699 2 DITDPLSLNTCTDEGHVVLASPLKTGR PVEILIPKDITDPLSL ASPLKTGRKRHRHRGQ K D I G R K 1 1 1 3 1 0 1 2 1 1 4 1 0 0 2 2 4 0 0 2 0 0 27 1 2908.46 Q7L2J0 Q7L2J0 234 260 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 3 4.2516E-22 103.24 By MS/MS By MS/MS 1 1 38941000 21130000 17811000 868 2198 966 2216;2217 2071;2072 2071 4376 2 DITTSADQIAEVK PGLELNKKDITTSADQ ADQIAEVKTMESHPPI K D I V K T 2 0 0 2 0 1 1 0 0 2 0 1 0 0 0 1 2 0 0 1 0 0 13 0 1389.6987 F5H527;Q76I76 F5H527 510 522 SSH2 Protein phosphatase Slingshot homolog 2 yes no 2 2.0431E-15 156.24 By MS/MS By MS/MS 1 1 10590000 5011300 5578700 869 887 967 2218;2219 2073;2074 2073 1595 2 DIYDKDNYELDEDTD LVRVLLVKDIYDKDNY YELDEDTD________ K D I T D - 0 0 1 6 0 0 2 0 0 1 1 1 0 0 0 0 1 0 2 0 0 0 15 1 1861.7378 Q9UBW7 Q9UBW7 1363 1377 ZMYM2 Zinc finger MYM-type protein 2 yes yes 2 0.020974 69.602 By matching By MS/MS 1 1 8663200 4483600 4179600 870 2804 968 2220;2221 2075 2075 1 DIYDLKDQIQDVEGR DTSLSELRDIYDLKDQ QIQDVEGRYMQGLKEL R D I G R Y 0 1 0 4 0 2 1 1 0 2 1 1 0 0 0 0 0 0 1 1 0 0 15 1 1805.8796 C9JSU1;Q9Y608 C9JSU1 114 128 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 3 0.00020804 86.214 By MS/MS By MS/MS 1 1 1039700 1039700 0 871 608 969 2222;2223 2076;2077 2076 7325 2 DIYETDYYR IGDFGMTRDIYETDYY IYETDYYRKGGKGLLP R D I Y R K 0 1 0 2 0 0 1 0 0 1 0 0 0 0 0 0 1 0 3 0 0 0 9 0 1236.5299 C9J5X1;P08069;P06213 C9J5X1 1158 1166 IGF1R;INSR Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Insulin receptor;Insulin receptor subunit alpha;Insulin receptor subunit beta no no 2 0.0012287 101.43 By MS/MS By MS/MS 2 2 13958000 6705400 7252800 872 564;1528 970;971 2224;2225;2226;2227 2078;2079;2080 2080 7312;7313 3 DIYLSPDRTGSSFGK NEFWEANRDIYLSPDR RTGSSFGKNSERRERM R D I G K N 0 1 0 2 0 0 0 2 0 1 1 1 0 1 1 3 1 0 1 0 0 0 15 1 1641.7999 Q15696 Q15696 345 359 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 yes yes 2 0.0054811 66.246 By MS/MS By matching 1 1 13711000 5746900 7963900 873 2003 972 2228;2229 2081 2081 3908 1 DKASPEPEKDFSEK KADPGAVKDKASPEPE PEKDFSEKAKPSPHPI K D K E K A 1 0 0 2 0 0 3 0 0 0 0 3 0 1 2 2 0 0 0 0 0 0 14 2 1605.7522 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 592 605 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.027234 50.188 By MS/MS By matching 1 1 10843000 5354100 5489100 874 69 973 2230;2231 2082 2082 1 DKEAIQAYSESLMTSAPK SSSKKGSKDKEAIQAY SLMTSAPKGSVLQEAK K D K P K G 3 0 0 1 0 1 2 0 0 1 1 2 1 0 1 3 1 0 1 0 0 0 18 1 1967.951 B7ZKQ9 B7ZKQ9 455 472 SCARB1 yes yes 3 7.6655E-05 80.238 By MS/MS By MS/MS 1 1 4845100 2550600 2294500 875 525 974 2232;2233 2083;2084;2085;2086 2084 7306 4 DKEISPSVTK QDKEKPEKDKEISPSV EISPSVTKKNTNKKTK K D K T K K 0 0 0 1 0 0 1 0 0 1 0 2 0 0 1 2 1 0 0 1 0 0 10 1 1102.587 Q8N488 Q8N488 95 104 RYBP RING1 and YY1-binding protein yes yes 2 0.00024727 112.64 By MS/MS By MS/MS 1 1 7504700 3764900 3739800 876 2310 975 2234;2235 2087;2088 2088 4640 2 DKEVSDDEAEEK TLFVEKERDKEVSDDE SDDEAEEKEDKEEEKE R D K E K E 1 0 0 3 0 0 4 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 12 1 1392.5892 P07900;G3V2J8 P07900 227 238 HSP90AA1 Heat shock protein HSP 90-alpha yes no 2 0.0014186 101.43 By MS/MS By matching 1 1 3438700 2215600 1223200 877 1540 976 2236;2237 2089 2089 2831 1 DKLNNLVLFDK KWSKGKVRDKLNNLVL NNLVLFDKATYDKLCK R D K D K A 0 0 2 2 0 0 0 0 0 0 3 2 0 1 0 0 0 0 0 1 0 0 11 1 1317.7293 P62851 P62851 42 52 RPS25 40S ribosomal protein S25 yes yes 2 0.00089571 104.43 By MS/MS By MS/MS 1 1 2655500 0 2655500 878 1802 977 2238;2239 2090;2091;2092 2090 3 DKLNTQSTYSEA VDGVKLKKDKLNTQST TQSTYSEA________ K D K E A - 1 0 1 1 0 1 1 0 0 0 1 1 0 0 0 2 2 0 1 0 0 0 12 1 1355.6205 Q5JWQ2;Q5JWQ6;E9PEP6;O14786 Q5JWQ2 94 105 NRP1 Neuropilin-1 yes no 2 7.5878E-21 172.98 By MS/MS By MS/MS 2 1 22475000 13945000 8530000 879 773 978 2240;2241;2242 2093;2094;2095;2096 2094 7378 4 DKLREIVGASTNWR IFHIHEVRDKLREIVG VGASTNWRDHVKAMEE R D K W R D 1 2 1 1 0 0 1 1 0 1 1 1 0 0 0 1 1 1 0 1 0 0 14 2 1643.8744 Q9Y305 Q9Y305 42 55 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial yes yes 2 0.011976 64.103 By MS/MS By matching 1 1 3150400 1680300 1470100 880 2901 979 2243;2244 2097 2097 6044 1 DKPSVEPVEEYDYEDLKESSNSVSNHQLSGFDQAR AQFIYSRRDKPSVEPV LSGFDQARLYSCLDHM R D K A R L 1 1 2 4 0 2 5 1 1 0 2 2 0 1 2 6 0 0 2 3 0 0 35 2 3997.809 E9PN23;Q9Y450;G5E991;E9PMN1;E9PLR4 E9PN23 24 58 HBS1L HBS1-like protein yes no 4 8.8478E-05 56.832 By MS/MS By MS/MS 2 2 140570000 78459000 62111000 881 830 980;981 2245;2246;2247;2248 2098;2099;2100;2101 2101 1496;1497;1498;1499;7392 4 DKRPLSGPDVGTPQPAGLASGAK GGPQESSRDKRPLSGP AGLASGAKLAAGRPFN R D K A K L 3 1 0 2 0 1 0 4 0 0 2 2 0 0 4 2 1 0 0 1 0 0 23 2 2218.1706 O96013 O96013 176 198 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 3 0.00098711 61.033 By MS/MS By MS/MS 1 1 103160000 52448000 50707000 882 1506 982 2249;2250 2102;2103 2103 2792 2 DKSDSPAIQLR REVLGIKRDKSDSPAI DSPAIQLRLKEPMDVD R D K L R L 1 1 0 2 0 1 0 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 11 1 1228.6412 Q96ST3 Q96ST3 936 946 SIN3A Paired amphipathic helix protein Sin3a yes yes 2;3 8.5756E-06 141.34 By MS/MS By MS/MS 2 2 23724000 12095000 11629000 883 2542 983 2251;2252;2253;2254 2104;2105;2106;2107 2104 5129;5130 4 DKSKASLEK PKPTKAGKDKSKASLE KSKASLEKAGKSGVKK K D K E K A 1 0 0 1 0 0 1 0 0 0 1 3 0 0 0 2 0 0 0 0 0 0 9 2 1004.5502 P53985;Q5T8R3;Q5T8R5 P53985 208 216 SLC16A1 Monocarboxylate transporter 1 yes no 3 0.0040206 84.169 By MS/MS 1 3323500 3323500 0 884 1764 984 2255 2108 2108 3330 1 DKSPSSLLEDAK PALPRKQRDKSPSSLL SSLLEDAKETCFTRDR R D K A K E 1 0 0 2 0 0 1 0 0 0 2 2 0 0 1 3 0 0 0 0 0 0 12 1 1288.6511 P42684 P42684 629 640 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.003442 87.363 By MS/MS By matching 1 1 17721000 9999100 7722200 885 1699 985 2256;2257 2109 2109 3118 1 DKSPSSLLEDAKETCFTR PALPRKQRDKSPSSLL AKETCFTRDRKGGFFS R D K T R D 1 1 0 2 1 0 2 0 0 0 2 2 0 1 1 3 2 0 0 0 0 0 18 2 2082.9892 P42684 P42684 629 646 ABL2 Abelson tyrosine-protein kinase 2 yes yes 3 0.0002145 77.468 By MS/MS By MS/MS 1 1 7351800 3693100 3658700 886 1699 986 2258;2259 2110;2111 2110 3118 2 DKSPVREPIDNLTPEER RSKSPFRKDKSPVREP DNLTPEERDARTVFCM K D K E R D 0 2 1 2 0 0 3 0 0 1 1 1 0 0 3 1 1 0 0 1 0 0 17 2 1994.0069 G3XAC6;Q14498;Q5QP22;Q5QP23;H0Y4X3 G3XAC6 134 150 RBM39 RNA-binding protein 39 yes no 3 3.0209E-25 153.58 By MS/MS By MS/MS 1 1 441480000 194860000 246630000 887 984 987 2260;2261 2112;2113;2114;2115 2114 1789 4 DKYVGVSSDSVGGFR RKKAKKNKDKYVGVSS SDSVGGFRYSERYDPE K D K F R Y 0 1 0 2 0 0 0 3 0 0 0 1 0 1 0 3 0 0 1 3 0 0 15 1 1571.758 Q14677 Q14677 157 171 CLINT1 Clathrin interactor 1 yes yes 2 0.0022997 68.44 By MS/MS By MS/MS 1 1 2279700 2279700 0 888 1952 988 2262;2263 2116;2117 2116 7706 2 DLADELALVDVIEDK CAISILMKDLADELAL LVDVIEDKLKGEMMDL K D L D K L 2 0 0 4 0 0 2 0 0 1 3 1 0 0 0 0 0 0 0 2 0 0 15 0 1656.8458 P00338;F5GXH2;F5GYU2;F5GXY2;F5GZQ4;F5H5J4;F5H6W8 P00338 43 57 LDHA L-lactate dehydrogenase A chain yes no 2 1.4022E-20 145.31 By MS/MS By MS/MS 1 1 4100200 2785800 1314300 889 1509 989 2264;2265 2118;2119 2119 2 DLAVPAALTPR YHTVCTPRDLAVPAAL VPAALTPRASPGHSPH R D L P R A 3 1 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 0 1 0 0 11 0 1122.6397 Q8TEM1 Q8TEM1 1836 1846 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.0038857 103.97 By MS/MS By MS/MS 1 1 53309000 29853000 23456000 890 2390 990 2266;2267 2120;2121 2120 6971 2 DLDAPDDVDFF PRAIVEYRDLDAPDDV APDDVDFF________ R D L F F - 1 0 0 5 0 0 0 0 0 0 1 0 0 2 1 0 0 0 0 1 0 0 11 0 1267.5245 Q9BXP5;H7C3A1 Q9BXP5 866 876 SRRT Serrate RNA effector molecule homolog yes no 2 0.0033165 93.374 By matching By MS/MS 1 1 1879600 802460 1077200 891 2599 991 2268;2269 2122 2122 1 DLDLLASVPSPSSSGSR KTSNTLEKDLDLLASV SPSSSGSRKVVGSMPT K D L S R K 1 1 0 2 0 0 0 1 0 0 3 0 0 0 2 6 0 0 0 1 0 0 17 0 1686.8424 A0A087WV97;Q8WU79 A0A087WV97 205 221 SMAP2 Stromal membrane-associated protein 2 yes no 2 4.5069E-08 119.47 By MS/MS By MS/MS 1 1 5967200 2495700 3471500 892 58 992 2270;2271 2123;2124 2123 105 2 DLDRPESQSPK LLLLKLSKDLDRPESQ RPESQSPKRPPEDFET K D L P K R 0 1 0 2 0 1 1 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 11 1 1270.6153 Q8WUA4;A0A087WZD8 Q8WUA4 159 169 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2 0.019405 65.809 By MS/MS By MS/MS 1 1 21634000 10401000 11233000 893 2399 993 2272;2273 2125;2126 2125 4795 2 DLDSQTMMVLVNYIFFK GKITDLIKDLDSQTMM LVNYIFFKAKWEMPFD K D L F K A 0 0 1 2 0 1 0 0 0 1 2 1 2 2 0 1 1 0 1 2 0 0 17 0 2063.0108 G3V595;P01011 G3V595 198 214 SERPINA3 Alpha-1-antichymotrypsin;Alpha-1-antichymotrypsin His-Pro-less yes no 2 2.8112E-25 150.46 By MS/MS By MS/MS 1 1 25275000 12501000 12773000 894 979 994 2274;2275 2127;2128 2128 113;114 2 DLEGSDIDTR NSEEYIRRDLEGSDID EGSDIDTRRRAACDLV R D L T R R 0 1 0 3 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1119.5044 P55060 P55060 373 382 CSE1L Exportin-2 yes yes 2 0.0064776 82.287 By MS/MS By MS/MS 1 1 3240700 1589800 1651000 895 1770 995 2276;2277 2129;2130 2130 2 DLELALSPIHNSSALPTTGR ETKGFNKKDLELALSP SALPTTGRSCVNLAKK K D L G R S 2 1 1 1 0 0 1 1 1 1 4 0 0 0 2 3 2 0 0 0 0 0 20 0 2091.096 A0A087WUU7;Q96GX5 A0A087WUU7 36 55 MASTL Serine/threonine-protein kinase greatwall yes no 2;3 7.0856E-09 96.562 By MS/MS By MS/MS 2 2 40463000 22924000 17539000 896 50 996 2278;2279;2280;2281 2131;2132;2133;2134 2131 93 4 DLELPSQEAPSFQGTESPKPCK RLKASCQRDLELPSQE TESPKPCKMPK_____ R D L C K M 1 0 0 1 1 2 3 1 0 0 2 2 0 1 4 3 1 0 0 0 0 0 22 1 2444.153 K7EPV3;Q6PJF5 K7EPV3 161 182 RHBDF2 Inactive rhomboid protein 2 yes no 3 0.0053358 52.185 By MS/MS By MS/MS 1 1 13169000 7074500 6094800 897 1284 997 2282;2283 2135;2136 2136 2315;6575 2 DLEQPTYRYESSSYTDQFSR YVEKQASRDLEQPTYR SYTDQFSRNYEHRLRY R D L S R N 0 2 0 2 0 2 2 0 0 0 1 0 0 1 1 4 2 0 3 0 0 0 20 1 2471.0877 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 961 980 TJP1 Tight junction protein ZO-1 yes no 3 0.0075605 49.993 By MS/MS By MS/MS 2 2 9169200 4203700 4965500 898 129 998 2284;2285;2286;2287 2137;2138;2139 2137 229;230;6254;7176 2 DLEVVAATPTSLLISWDAPAVTVR STVSDVPRDLEVVAAT DAPAVTVRYYRITYGE R D L V R Y 4 1 0 2 0 0 1 0 0 1 3 0 0 0 2 2 3 1 0 4 0 0 24 0 2523.3585 P02751;H0Y7Z1 P02751 1453 1476 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 2;3 5.5219E-15 118.47 By MS/MS By MS/MS 2 2 46279000 23826000 22453000 899 1518 999 2288;2289;2290;2291 2140;2141;2142;2143;2144 2144 5 DLFAFQESPPR GEKRQVRRDLFAFQES AFQESPPRFLPSHPIV R D L P R F 1 1 0 1 0 1 1 0 0 0 1 0 0 2 2 1 0 0 0 0 0 0 11 0 1305.6354 E7EX48;P51957 E7EX48 467 477 NEK4 Serine/threonine-protein kinase Nek4 yes no 2 0.00014721 113.77 By MS/MS By MS/MS 1 1 3916900 1950900 1966000 900 754 1000 2292;2293 2145;2146 2146 1379 2 DLFDLNSSEEDDTEGFSER DEDRKQFKDLFDLNSS DTEGFSERGILRPLST K D L E R G 0 1 1 4 0 0 4 1 0 0 2 0 0 2 0 3 1 0 0 0 0 0 19 0 2203.9029 Q9Y3T9 Q9Y3T9 666 684 NOC2L Nucleolar complex protein 2 homolog yes yes 2 9.1337E-28 140.08 By MS/MS By MS/MS 2 1 37021000 20189000 16832000 901 2912 1001;1002 2294;2295;2296 2147;2148;2149;2150 2149 6054;6055 4 DLFDPIIEDR EESYEVFKDLFDPIIE FDPIIEDRHGGYKPSD K D L D R H 0 1 0 3 0 0 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1231.6085 P12277;G3V4N7;G3V461 P12277 87 96 CKB Creatine kinase B-type yes no 2 0.00029852 113.62 By MS/MS By MS/MS 1 1 8701900 3945800 4756100 902 1571 1003 2297;2298 2151;2152 2152 2 DLFDYSPPLHK QVKSEKLKDLFDYSPP DYSPPLHKNLDAREKS K D L H K N 0 0 0 2 0 0 0 0 1 0 2 1 0 1 2 1 0 0 1 0 0 0 11 0 1330.6558 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 507 517 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 6.1732E-41 193.62 By MS/MS By MS/MS 2 2 91925000 47544000 44381000 903 2759 1004 2299;2300;2301;2302 2153;2154;2155;2156;2157;2158;2159;2160;2161 2155 5644 9 DLFSLDSEDPSPASPPLR EQILRTGRDLFSLDSE SPASPPLRSSGSSLFP R D L L R S 1 1 0 3 0 0 1 0 0 0 3 0 0 1 4 4 0 0 0 0 0 0 18 0 1941.932 H3BTX0;Q9BTK6 H3BTX0 54 71 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes no 2;3 1.7798E-19 130.01 By MS/MS By MS/MS 2 2 287080000 157760000 129320000 904 1143 1005 2303;2304;2305;2306 2162;2163;2164;2165;2166;2167 2163 2085;2086 6 DLFSLDSEDPSPASPPLRSSGSSLFPR EQILRTGRDLFSLDSE SGSSLFPRQRKY____ R D L P R Q 1 2 0 3 0 0 1 1 0 0 4 0 0 2 5 8 0 0 0 0 0 0 27 1 2860.3879 H3BTX0;Q9BTK6 H3BTX0 54 80 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes no 3 1.0878E-05 71.527 By MS/MS By MS/MS 1 1 32697000 22052000 10645000 905 1143 1006 2307;2308 2168;2169 2169 2085;2086 2 DLGHNDKSSTPGLKSNTPTPR STPSSKTKDLGHNDKS KSNTPTPRNDAPTPGT K D L P R N 0 1 2 2 0 0 0 2 1 0 2 2 0 0 3 3 3 0 0 0 0 0 21 2 2221.1087 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 303 323 TLE3 Transducin-like enhancer protein 3 yes no 4 0.0035352 50.117 By matching By MS/MS 1 1 7479100 3560400 3918700 906 897 1007 2309;2310 2170 2170 1608;6469 1 DLGNPNTAPPTPELHGINPVFLSSNPSR VRAGHGERDLGNPNTA FLSSNPSRWSVEEVYE R D L S R W 1 1 4 1 0 0 1 2 1 1 3 0 0 1 6 3 2 0 0 1 0 0 28 0 2940.473 J3KQH6;P78364 J3KQH6 867 894 PHC1 Polyhomeotic-like protein 1 yes no 3 0.02448 43.494 By matching By MS/MS 1 1 7312200 4569800 2742400 907 1234 1008 2311;2312 2171 2171 1 DLHQGIEAASDEEDLR EKFHELHRDLHQGIEA ASDEEDLRWWRSTHGP R D L L R W 2 1 0 3 0 1 3 1 1 1 2 0 0 0 0 1 0 0 0 0 0 0 16 0 1796.8177 Q9UKS6;A0A0C4DGG1;E9PIY1 Q9UKS6 267 282 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 3 0.023769 45.885 By MS/MS 1 1600000 1600000 0 908 2835 1009 2313 2172 2172 1 DLIHDQDEDEEEEEGQR DNRVTSFRDLIHDQDE EEEEEGQRFYAGGSER R D L Q R F 0 1 0 4 0 2 6 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 17 0 2084.8407 F2Z2K0;Q9UNZ2;R4GNE6 F2Z2K0 77 93 NSFL1C NSFL1 cofactor p47 yes no 3 8.924E-05 83.758 By MS/MS By MS/MS 1 1 5158900 2728200 2430700 909 848 1010 2314;2315 2173;2174 2174 2 DLIHDQDEDEEEEEGQRFYAGGSER DNRVTSFRDLIHDQDE FYAGGSERSGQQIVGP R D L E R S 1 2 0 4 0 2 7 3 1 1 1 0 0 1 0 1 0 0 1 0 0 0 25 1 2952.2282 F2Z2K0;Q9UNZ2 F2Z2K0 77 101 NSFL1C NSFL1 cofactor p47 yes no 3 0.0012902 55.302 By MS/MS By MS/MS 1 1 34015000 21231000 12784000 910 848 1011 2316;2317 2175;2176 2176 1531;7396 2 DLLHPSPEEEKR ________________ PSPEEEKRKHKKKRLV K D L K R K 0 1 0 1 0 0 3 0 1 0 2 1 0 0 2 1 0 0 0 0 0 0 12 1 1448.726 P42677;Q5T4L4 P42677 6 17 RPS27 40S ribosomal protein S27 yes no 3 3.3388E-05 115.06 By MS/MS By MS/MS 1 1 8787400 4719200 4068200 911 1698 1012 2318;2319 2177;2178 2177 3115 2 DLLHPSPEEEKRK ________________ SPEEEKRKHKKKRLVQ K D L R K H 0 1 0 1 0 0 3 0 1 0 2 2 0 0 2 1 0 0 0 0 0 0 13 2 1576.8209 P42677;Q5T4L4 P42677 6 18 RPS27 40S ribosomal protein S27 yes no 3 0.0022088 81.327 By matching By MS/MS 1 1 8232400 3405400 4827000 912 1698 1013 2320;2321 2179 2179 3115 1 DLLIAYYDVDYEK NKDLIQGKDLLIAYYD YYDVDYEKNAKGSNYW K D L E K N 1 0 0 3 0 0 1 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 13 0 1618.7767 P30101 P30101 259 271 PDIA3 Protein disulfide-isomerase A3 yes yes 2 0.0023027 100.72 By MS/MS By MS/MS 1 1 10367000 5076200 5290800 913 1653 1014 2322;2323 2180;2181;2182;2183 2181 4 DLLPSGSRDEPPPASQSTSQDCSQALKQSP YPPPPAVRDLLPSGSR SQALKQSP________ R D L S P - 2 1 0 3 1 4 1 1 0 0 3 1 0 0 5 7 1 0 0 0 0 0 30 2 3182.4786 Q5JRA6 Q5JRA6 1878 1907 MIA3 Melanoma inhibitory activity protein 3 yes yes 3 0.001327 55.35 By MS/MS By matching 1 1 28826000 16066000 12761000 914 2071 1015 2324;2325 2184 2184 4064 1 DLLSDLQDISDSER KEEKMEERDLLSDLQD QDISDSERKTSSAESS R D L E R K 0 1 0 4 0 1 1 0 0 1 3 0 0 0 0 3 0 0 0 0 0 0 14 0 1604.753 J3QR29;A0A0D9SEI3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;P21127;J3KS35;E7ESP2;Q5QPR4;Q5QPR3;Q9UQ88 Q5QPR4 225 238 CDK11B;CDC2L1;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 2 3.6021E-27 169.92 By MS/MS By MS/MS 1 1 10777000 5188700 5588800 915 2084;305 1016 2326;2327 2185;2186 2185 553 2 DLNYCFSGMSDHR FGSDRFGRDLNYCFSG FSGMSDHRYGDGGSTF R D L H R Y 0 1 1 2 1 0 0 1 1 0 1 0 1 1 0 2 0 0 1 0 0 0 13 0 1600.6399 E9PCY7;G8JLB6;P55795;P31943;H0YB39;H0YBG7;H0YBD7 E9PCY7 263 275 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 3 0.0012205 78.486 By MS/MS By MS/MS 1 1 2574500 1317500 1257100 916 767 1017 2328;2329 2187;2188 2187 7377 2 DLPDGHAASPR KPDFVQVKDLPDGHAA DGHAASPRGTEASPPQ K D L P R G 2 1 0 2 0 0 0 1 1 0 1 0 0 0 2 1 0 0 0 0 0 0 11 0 1134.5418 Q9P1Y5 Q9P1Y5 326 336 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.010514 69.229 By MS/MS 1 20027000 0 20027000 917 2778 1018 2330 2189 2189 5698 1 DLPLLLFR RPEVPLRRDLPLLLFR DLPLLLFRTQTSDPAM R D L F R T 0 1 0 1 0 0 0 0 0 0 4 0 0 1 1 0 0 0 0 0 0 0 8 0 985.59605 Q5SZU1;O43175 Q5SZU1 428 435 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.0093832 110.63 By MS/MS By MS/MS 1 1 3777800 2667500 1110300 918 1373 1019 2331;2332 2190;2191 2190 2 DLPSADSVQYR LYHEHLRKDLPSADSV SADSVQYRHLPSRGIT K D L Y R H 1 1 0 2 0 1 0 0 0 0 1 0 0 0 1 2 0 0 1 1 0 0 11 0 1249.5939 Q92621 Q92621 572 582 NUP205 Nuclear pore complex protein Nup205 yes yes 2 3.0938E-06 131.5 By MS/MS By MS/MS 1 1 22434000 11974000 10460000 919 2429 1020 2333;2334 2192;2193 2192 7823 2 DLQGEEIKSQNSQESTADESEDDMSSQASK WLGNLKNRDLQGEEIK DMSSQASKSKATEDGE R D L S K S 2 0 1 4 0 4 5 1 0 1 1 2 1 0 0 7 1 0 0 0 0 0 30 1 3272.3746 Q9BXW9 Q9BXW9 1393 1422 FANCD2 Fanconi anemia group D2 protein yes yes 3 0.00017519 62.27 By matching By MS/MS 1 1 40480000 20501000 19979000 920 2603 1021 2335;2336 2194 2194 5270 1 DLQSPDFTTGFHSDKIEAK YAGVGSPRDLQSPDFT HSDKIEAKVKPYVNGT R D L A K V 1 0 0 3 0 1 1 1 1 1 1 2 0 2 1 2 2 0 0 0 0 0 19 1 2135.0171 E9PDR5;E7EPI0;Q9P2D0 E9PDR5 841 859 IBTK Inhibitor of Bruton tyrosine kinase yes no 3 1.491E-05 83.792 By MS/MS By MS/MS 1 1 48113000 25338000 22775000 921 712 1022 2337;2338 2195;2196 2196 1262 2 DLQSSPPSLPLGFLGEGDAVTK PSHGGPTRDLQSSPPS GEGDAVTKAIQDARQL R D L T K A 1 0 0 2 0 1 1 3 0 0 4 1 0 1 3 3 1 0 0 1 0 0 22 0 2227.1372 Q9UN79 Q9UN79 331 352 SOX13 Transcription factor SOX-13 yes yes 3 0.013265 45.885 By MS/MS 1 1257000 1257000 0 922 2860 1023 2339 2197 2197 5894 1 DLQVSETAETSLTLLWK ATELDTPKDLQVSETA TSLTLLWKTPLAKFDR K D L W K T 1 0 0 1 0 1 2 0 0 0 4 1 0 0 0 2 3 1 0 1 0 0 17 0 1933.0044 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 990 1006 TNC Tenascin yes no 2;3 3.0232E-46 180.85 By MS/MS By MS/MS 6 5 40140000 18199000 21940000 923 762 1024 2340;2341;2342;2343;2344;2345;2346;2347;2348;2349;2350 2198;2199;2200;2201;2202;2203;2204;2205;2206;2207 2204 10 DLRSPLIATPTFVADKDGAR TEKIYIRKDLRSPLIA VADKDGARQTGLLDPG K D L A R Q 3 2 0 3 0 0 0 1 0 1 2 1 0 1 2 1 2 0 0 1 0 0 20 2 2142.1433 P49116 P49116 216 235 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes yes 3 1.5052E-08 94.072 By MS/MS By MS/MS 1 1 9755100 5220800 4534300 924 1722 1025 2351;2352 2208;2209;2210 2210 3225 3 DLRSPLTATPTFVTDSESTR TEKIYIRKDLRSPLTA VTDSESTRSTGLLDSG K D L T R S 1 2 0 2 0 0 1 0 0 0 2 0 0 1 2 3 5 0 0 1 0 0 20 1 2193.0913 A0A087WUK4;P13056 A0A087WUK4 212 231 NR2C1 Nuclear receptor subfamily 2 group C member 1 yes no 3 0.021333 43.598 By MS/MS By matching 1 1 12731000 7157900 5572800 925 48 1026 2353;2354 2211 2211 79 1 DLSFLLDKK RKKNAPKRDLSFLLDK LSFLLDKKAVLPTPVT R D L K K A 0 0 0 2 0 0 0 0 0 0 3 2 0 1 0 1 0 0 0 0 0 0 9 1 1077.607 O75151 O75151 703 711 PHF2 Lysine-specific demethylase PHF2 yes yes 2 0.012179 84.31 By MS/MS By MS/MS 1 1 3131800 1437200 1694600 926 1430 1027 2355;2356 2212;2213 2212 2631 2 DLSLEEIQK PLSPPKKKDLSLEEIQ LSLEEIQKKLEAAEER K D L Q K K 0 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1073.5605 A2A2D0;P16949;E5RGX5;Q93045 A2A2D0 44 52 STMN1;STMN2 Stathmin;Stathmin-2 no no 2 0.0044435 105.17 By MS/MS By MS/MS 1 1 20938000 12651000 8287400 927 393;696 1028 2357;2358 2214;2215 2215 755 2 DLSLEEIQKK PLSPPKKKDLSLEEIQ SLEEIQKKLEAAEERR K D L K K L 0 0 0 1 0 1 2 0 0 1 2 2 0 0 0 1 0 0 0 0 0 0 10 1 1201.6554 A2A2D0;P16949;E5RGX5;Q93045 A2A2D0 44 53 STMN1;STMN2 Stathmin;Stathmin-2 no no 2 7.0524E-05 136.49 By MS/MS By MS/MS 1 1 12347000 7358000 4989100 928 393;696 1029 2359;2360 2216;2217 2216 755 2 DLSMSEEDQMMR PIMGGVVRDLSMSEED SEEDQMMRAIAMSLGQ R D L M R A 0 1 0 2 0 1 2 0 0 0 1 0 3 0 0 2 0 0 0 0 0 0 12 0 1470.5789 Q7Z6Z7 Q7Z6Z7 1366 1377 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.03066 54.539 By MS/MS By matching 1 1 4318000 1983400 2334600 929 2226 1030 2361;2362 2218 2218 0 DLSPEPAPDEGPR GDLGGGSRDLSPEPAP PAPDEGPRRDGDPAPK R D L P R R 1 1 0 2 0 0 2 1 0 0 1 0 0 0 4 1 0 0 0 0 0 0 13 0 1378.6365 Q8TBE0 Q8TBE0 182 194 BAHD1 Bromo adjacent homology domain-containing 1 protein yes yes 2 0.012897 63.181 By matching By MS/MS 1 1 7318100 3802800 3515400 930 2373 1031 2363;2364 2219 2219 4751 1 DLSPTLIDNSAAK GLQSPPSRDLSPTLID LIDNSAAKQLARNTVT R D L A K Q 2 0 1 2 0 0 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 13 0 1343.6933 Q9P2B4 Q9P2B4 486 498 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 2 0.0027205 83.243 By MS/MS By MS/MS 1 1 8430900 4473300 3957600 931 2786 1032 2365;2366 2220;2221 2220 5719 2 DLSQESSSTAPGSEVTIKQEPVSPK LTAEATGKDLSQESSS KQEPVSPKKKENALLR K D L P K K 1 0 0 1 0 2 3 1 0 1 1 2 0 0 3 6 2 0 0 2 0 0 25 1 2600.2817 E7EWM1;Q15596 E7EWM1 714 738 NCOA2 Nuclear receptor coactivator 2 yes no 3 2.2751E-05 74.13 By MS/MS By MS/MS 1 1 30055000 19332000 10724000 932 748 1033 2367;2368 2222;2223 2222 1360 2 DLSTSPKPSPIPSPVLGR ENTVSAGKDLSTSPKP IPSPVLGRKPNASQSL K D L G R K 0 1 0 1 0 0 0 1 0 1 2 1 0 0 5 4 1 0 0 1 0 0 18 1 1847.0153 Q8NDI1 Q8NDI1 424 441 EHBP1 EH domain-binding protein 1 yes yes 3 0.0047701 56.959 By MS/MS By MS/MS 2 3 11982000 6005300 5976800 933 2344 1034;1035 2369;2370;2371;2372;2373 2224;2225;2226 2224 4698;4699;4700 3 DLTDYLMK LRLDLAGRDLTDYLMK DLTDYLMKILTERGYS R D L M K I 0 0 0 2 0 0 0 0 0 0 2 1 1 0 0 0 1 0 1 0 0 0 8 0 997.47903 P63261;P60709;I3L3I0;I3L1U9;I3L4N8;Q562R1;P63267;P68133;P68032;P62736 P63261 184 191 ACTG1;ACTB;ACTBL2;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 2 0.016355 90.777 By matching By MS/MS 1 1 9297800 4302700 4995100 934 1785;1799 1036 2374;2375 2227 2227 1 DLTHSDSESSLHMSDR QHGLGSQRDLTHSDSE SSLHMSDRQRVAPKPP R D L D R Q 0 1 0 3 0 0 1 0 2 0 2 0 1 0 0 5 1 0 0 0 0 0 16 0 1815.7694 H0YDB2;E9PNJ4;Q13586 H0YDB2 277 292 STIM1 Stromal interaction molecule 1 yes no 3 8.2887E-21 139.66 By MS/MS By MS/MS 1 1 27190000 14949000 12241000 935 832 1037 2376;2377 2228;2229 2228 1502 2 DLTTAGAVTQCYR HNMYREYRDLTTAGAV GAVTQCYRDMGARHRA R D L Y R D 2 1 0 1 1 1 0 1 0 0 1 0 0 0 0 0 3 0 1 1 0 0 13 0 1454.6824 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 60 72 RPL18A 60S ribosomal protein L18a yes no 2 0.0034913 88.596 By MS/MS By MS/MS 1 1 3614900 2318600 1296400 936 1314 1038 2378;2379 2230;2231 2230 2 DLTYQVVLGEYNLAVK TAGHCISRDLTYQVVL GEYNLAVKEGPEQVIP R D L V K E 1 0 1 1 0 1 1 1 0 0 3 1 0 0 0 0 1 0 2 3 0 0 16 0 1823.9669 B1AQ52;P09093 B1AQ52 78 93 CELA3A Chymotrypsin-like elastase family member 3A yes no 2 0.0018534 78.324 By MS/MS 1 1987500 0 1987500 937 469 1039 2380 2232 2232 1 DLVLPTQALPASPALK AFAKLDQKDLVLPTQA LPASPALKNKRPRKDE K D L L K N 3 0 0 1 0 1 0 0 0 0 4 1 0 0 3 1 1 0 0 1 0 0 16 0 1632.9451 J3KSZ6;U3KQ35;H3BR06;Q15554 J3KSZ6 98 113 TERF2 Telomeric repeat-binding factor 2 yes no 2;3 1.7054E-06 117.2 By MS/MS By MS/MS 2 2 175450000 102900000 72549000 938 1133 1040 2381;2382;2383;2384 2233;2234;2235;2236 2234 2068 4 DLVQPDKPASPK SGHLMQTRDLVQPDKP PDKPASPKFIVTLDGV R D L P K F 1 0 0 2 0 1 0 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 12 1 1293.6929 H0YJA2;Q6PJT7;G3V4R5;G3V411 H0YJA2 422 433 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 2;3 0.00051951 105.95 By MS/MS By MS/MS 2 2 221910000 119820000 102090000 939 1080 1041 2385;2386;2387;2388 2237;2238;2239;2240 2240 1994 4 DLVSFPLSPAVR ________________ FPLSPAVRVKLVSAGF R D L V R V 1 1 0 1 0 0 0 0 0 0 2 0 0 1 2 2 0 0 0 2 0 0 12 0 1299.7187 J3QLB5;E9PI66;Q7KZJ0;J3QKK3;O43502 J3QLB5 7 18 RAD51C DNA repair protein RAD51 homolog 3 yes no 2 1.1812E-06 120.84 By MS/MS By MS/MS 1 1 6372200 3630100 2742000 940 800 1042 2389;2390 2241;2242 2241 1435 2 DLYANTVLSGGTTMYPGIADR KCDVDIRKDLYANTVL MYPGIADRMQKEITAL K D L D R M 2 1 1 2 0 0 0 3 0 1 2 0 1 0 1 1 3 0 2 1 0 0 21 0 2214.0627 P63261;P60709 P63261 292 312 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2 0.0028223 66.246 By matching By MS/MS 1 1 10761000 5919800 4840800 941 1785 1043 2391;2392 2243 2243 226 1 DLYFEGGVSSVYLWDLDHGFAGVILIK NNAFDQYRDLYFEGGV FAGVILIKKAGDGSKK R D L I K K 1 0 0 3 0 0 1 4 1 2 4 1 0 2 0 2 0 1 2 3 0 0 27 0 3012.5273 B1AK87;B1AK85;B1AK88;P47756 B1AK87 97 123 CAPZB F-actin-capping protein subunit beta yes no 3 0.00042743 59.561 By matching By MS/MS 1 1 24779000 12559000 12220000 942 454 1044 2393;2394 2244 2244 1 DLYLASVFHATAFELDTDGNPFDQDIYGR LSRMSGKKDLYLASVF FDQDIYGREELRSPKL K D L G R E 3 1 1 5 0 1 1 2 1 1 3 0 0 3 1 1 2 0 2 1 0 0 29 0 3289.5204 E9PKH2;P50454 E9PKH2 128 156 SERPINH1 Serpin H1 yes no 3 0.00062976 58.294 By MS/MS 1 7240500 7240500 0 943 815 1045 2395 2245 2245 1 DLYRPLSSDDLDSVGDSV PGSLRKQRDLYRPLSS LDSVGDSV________ R D L S V - 0 1 0 5 0 0 0 1 0 0 3 0 0 0 1 4 0 0 1 2 0 0 18 1 1951.9011 Q5VZY9 Q5VZY9 346 363 DCLK1 yes yes 2 3.6879E-06 103.01 By MS/MS By MS/MS 2 2 22404000 12697000 9706400 944 2126 1046 2396;2397;2398;2399 2246;2247;2248;2249 2248 4229;4230;4231 4 DMESPTKLDVTLAK KTEVALAKDMESPTKL KLDVTLAKDMQPSMES K D M A K D 1 0 0 2 0 0 1 0 0 0 2 2 1 0 1 1 2 0 0 1 0 0 14 1 1546.7913 E7EVA0;P27816;H7C456 E7EVA0 294 307 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 8.2218E-128 228.76 By MS/MS By MS/MS 4 4 600100000 342560000 257540000 945 742 1047;1048 2400;2401;2402;2403;2404;2405;2406;2407 2250;2251;2252;2253;2254;2255;2256;2257 2254 86 1341;6428 8 DMGSVALDAGTAKDSLSPVLHPSDLILTR EQLERLRKDMGSVALD PSDLILTRGTLDEEDE K D M T R G 3 1 0 4 0 0 0 2 1 1 5 1 1 0 2 4 2 0 0 2 0 0 29 1 2978.5383 Q9HCN4 Q9HCN4 298 326 GPN1 GPN-loop GTPase 1 yes yes 3 0.0030867 49.312 By MS/MS 1 8111200 8111200 0 946 2697 1049 2408 2258 2258 5505 1 DMLGSLRDSALFVK TRGEREQRDMLGSLRD RDSALFVKNAMSLPQL R D M V K N 1 1 0 2 0 0 0 1 0 0 3 1 1 1 0 2 0 0 0 1 0 0 14 1 1550.8127 Q9H3Q1;J3KRZ9 Q9H3Q1 101 114 CDC42EP4 Cdc42 effector protein 4 yes no 2 0.0040582 75.669 By MS/MS By matching 1 1 2500500 1299300 1201100 947 2654 1050 2409;2410 2259 2259 5414;5415 1 DMPGGFLFEGLSDDEDDFHPNTR SMPSSSYRDMPGGFLF DDFHPNTRSTPSSSTP R D M T R S 0 1 1 5 0 0 2 3 1 0 2 0 1 3 2 1 1 0 0 0 0 0 23 0 2610.0969 H3BUV9;Q96S82 H3BUV9 163 185 UBL7 Ubiquitin-like protein 7 yes no 3 0.0002006 71.265 By MS/MS By MS/MS 1 1 74507000 40444000 34063000 948 1145 1051 2411;2412 2260;2261 2260 135 2088 2 DMQGLSLDAASQPSK PKPRGLSRDMQGLSLD DAASQPSKGGLLERTA R D M S K G 2 0 0 2 0 2 0 1 0 0 2 1 1 0 1 3 0 0 0 0 0 0 15 0 1546.7297 E9PLZ8;Q96EY5;E9PLL0;M0QZK6;E9PQA6 E9PLZ8 26 40 MVB12A Multivesicular body subunit 12A yes no 2 0.0067104 63.681 By MS/MS By matching 1 1 7829000 4647300 3181700 949 824 1052 2413;2414 2262 2262 1471 1 DMQGLSLDAASQPSKGGLLER PKPRGLSRDMQGLSLD SKGGLLERTASRLGSR R D M E R T 2 1 0 2 0 2 1 3 0 0 4 1 1 0 1 3 0 0 0 0 0 0 21 1 2172.0845 E9PLZ8;Q96EY5;E9PLL0;M0QZK6;E9PQA6 E9PLZ8 26 46 MVB12A Multivesicular body subunit 12A yes no 3 0.00078619 66.777 By MS/MS By MS/MS 2 2 14317000 7012100 7305300 950 824 1053;1054 2415;2416;2417;2418 2263;2264;2265;2266 2265 1471 4 DMQPLSPISVHER TDSGSLRRDMQPLSPI SPISVHERYSSPTAGS R D M E R Y 0 1 0 1 0 1 1 0 1 1 1 0 1 0 2 2 0 0 0 1 0 0 13 0 1507.7453 P28749 P28749 635 647 RBL1 Retinoblastoma-like protein 1 yes yes 2;3 0.001963 88.73 By MS/MS By MS/MS 2 2 45171000 22679000 22492000 951 1643 1055 2419;2420;2421;2422 2267;2268;2269;2270 2270 3033 4 DMSLYASLTSEK LSDVAPPRDMSLYASL YASLTSEKVQSLEGEK R D M E K V 1 0 0 1 0 0 1 0 0 0 2 1 1 0 0 3 1 0 1 0 0 0 12 0 1343.6279 P46821 P46821 1758 1769 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.02049 52.167 By MS/MS 1 933340 933340 0 952 1712 1056 2423 2271 2271 7610 0 DMSPLSETEMALGKDVTPPPETEVVLIK VKEVGLLKDMSPLSET ETEVVLIKNVCLPPEM K D M I K N 1 0 0 2 0 0 4 1 0 1 3 2 2 0 4 2 3 0 0 3 0 0 28 1 3025.5239 E7EVA0;P27816 E7EVA0 522 549 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 3.1135E-12 86.825 By MS/MS 1 27894000 27894000 0 953 742 1057 2424 2272 2272 87;88 6429 1 DMYDKEYYSVHNK VADFGLARDMYDKEYY EYYSVHNKTGAKLPVK R D M N K T 0 0 1 2 0 0 1 0 1 0 0 2 1 0 0 1 0 0 3 1 0 0 13 1 1690.7297 P08581 P08581 1228 1240 MET Hepatocyte growth factor receptor yes yes 3 0.01454 57.802 By MS/MS 1 2212500 2212500 0 954 1544 1058 2425 2273 2273 2840;7554 1 DNEEREQSSDLTPSGDVSPVKPLSR CLHYKKMKDNEEREQS SPVKPLSRSAELEFPL K D N S R S 0 2 1 3 0 1 3 1 0 0 2 1 0 0 3 5 1 0 0 2 0 0 25 2 2741.3104 Q8WYQ5 Q8WYQ5 360 384 DGCR8 Microprocessor complex subunit DGCR8 yes yes 3 0.0040911 51.857 By matching By MS/MS 1 1 7284000 3660200 3623800 955 2418 1059 2426;2427 2274 2274 4857;4858;4859 1 DNIQGITKPAIR KRHRKVLRDNIQGITK GITKPAIRRLARRGGV R D N I R R 1 1 1 1 0 1 0 1 0 3 0 1 0 0 1 0 1 0 0 0 0 0 12 1 1324.7463 P62805 P62805 25 36 HIST1H4A Histone H4 yes yes 3 0.00055322 112.64 By MS/MS By MS/MS 1 1 27346000 12690000 14656000 956 1801 1060 2428;2429 2275;2276 2276 2 DNLAQQSFNMEQANYTIQSLK KRMYEQQRDNLAQQSF NYTIQSLKDTKTTVDA R D N L K D 2 0 3 1 0 4 1 0 0 1 2 1 1 1 0 2 1 0 1 0 0 0 21 0 2442.1485 Q9NZZ3 Q9NZZ3 80 100 CHMP5 Charged multivesicular body protein 5 yes yes 2;3 6.8878E-19 120.71 By MS/MS By MS/MS 3 3 35399000 19331000 16068000 957 2772 1061;1062 2430;2431;2432;2433;2434;2435 2277;2278;2279;2280 2277 363 5691;7078;7921 4 DNLAQQSFNMEQANYTIQSLKDTK KRMYEQQRDNLAQQSF IQSLKDTKTTVDAMKL R D N T K T 2 0 3 2 0 4 1 0 0 1 2 2 1 1 0 2 2 0 1 0 0 0 24 1 2786.3181 Q9NZZ3 Q9NZZ3 80 103 CHMP5 Charged multivesicular body protein 5 yes yes 3 8.087E-05 72.927 By MS/MS By MS/MS 1 1 12063000 6791500 5271900 958 2772 1063 2436;2437 2281;2282 2282 5691;7078;7921 2 DNLGEVPLTPTEEASLPLAVTK HLEASALRDNLGEVPL SLPLAVTKEAKVSTPP R D N T K E 2 0 1 1 0 0 3 1 0 0 4 1 0 0 3 1 3 0 0 2 0 0 22 0 2293.2053 H7C3Y7;H0Y764;Q6ZNJ1 H7C3Y7 228 249 NBEAL2 Neurobeachin-like protein 2 yes no 3 0.0011561 65.184 By MS/MS 1 4322200 0 4322200 959 1036 1064 2438 2283 2283 6517 1 DNLLDTYSADQGDSSEGGTLAR FLKQHYGRDNLLDTYS SEGGTLARGEEEEKRL R D N A R G 2 1 1 4 0 1 1 3 0 0 3 0 0 0 0 3 2 0 1 0 0 0 22 0 2284.0091 Q6ZRP7 Q6ZRP7 565 586 QSOX2 Sulfhydryl oxidase 2 yes yes 2 0.01817 48.351 By matching By MS/MS 1 1 5213400 2595600 2617800 960 2181 1065 2439;2440 2284 2284 4356 1 DNLTLWTSDMQGDGEEQNKEALQDVEDENQ TLIMQLLRDNLTLWTS QDVEDENQ________ R D N N Q - 1 0 3 5 0 4 5 2 0 0 3 1 1 0 0 1 2 1 0 1 0 0 30 1 3450.4641 P62258 P62258 226 255 YWHAE 14-3-3 protein epsilon yes yes 3 2.9964E-06 74.905 By MS/MS By MS/MS 2 2 124750000 73161000 51590000 961 1793 1066;1067 2441;2442;2443;2444 2285;2286;2287 2286 229 3 DNLTLWTSENQGDEGDAGEGEN TLIMQLLRDNLTLWTS GDAGEGEN________ R D N E N - 1 0 3 3 0 1 4 4 0 0 2 0 0 0 0 1 2 1 0 0 0 0 22 0 2349.9469 P31946 P31946 225 246 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2 0.001059 70.26 By matching By MS/MS 1 1 23848000 11351000 12497000 962 1663 1068 2445;2446 2288 2288 1 DNPGVVTCLDEAR AMVSMVTKDNPGVVTC VTCLDEARHGFESGDF K D N A R H 1 1 1 2 1 0 1 1 0 0 1 0 0 0 1 0 1 0 0 2 0 0 13 0 1444.6616 P22314;Q5JRR9;Q5JRS0 P22314 227 239 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 0.0028106 91.937 By MS/MS By MS/MS 1 1 8980600 4315700 4664900 963 1617 1069 2447;2448 2289;2290 2289 2 DNQFDSPKRE VRMDFARRDNQFDSPK QFDSPKRE________ R D N R E - 0 1 1 2 0 1 1 0 0 0 0 1 0 1 1 1 0 0 0 0 0 0 10 2 1234.5578 H3BTC1 H3BTC1 28 37 yes yes 2 0.020822 84.605 By matching By MS/MS 1 1 11777000 5667800 6109100 964 1142 1070 2449;2450 2291 2291 2083 1 DNSPPPAFKPEPPK AASSDQLRDNSPPPAF AFKPEPPKAKTQNKEE R D N P K A 1 0 1 1 0 0 1 0 0 0 0 2 0 1 6 1 0 0 0 0 0 0 14 1 1519.7671 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1043 1056 TJP2 Tight junction protein ZO-2 yes no 2 0.0033787 78.548 By MS/MS By MS/MS 1 1 10353000 5412400 4940600 965 368 1071 2451;2452 2292;2293 2292 688 2 DNTFFRESPVGR RERSPYKRDNTFFRES FRESPVGRKDSPHSRS R D N G R K 0 2 1 1 0 0 1 1 0 0 0 0 0 2 1 1 1 0 0 1 0 0 12 1 1423.6844 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8;F8VPY7;F8VWU8 F8WF16 78 89 PPHLN1 Periphilin-1 yes no 3 0.0013168 86.344 By MS/MS By MS/MS 1 1 54138000 24627000 29511000 966 518 1072 2453;2454 2294;2295 2295 961 2 DNTFFRESPVGRK RERSPYKRDNTFFRES RESPVGRKDSPHSRSG R D N R K D 0 2 1 1 0 0 1 1 0 0 0 1 0 2 1 1 1 0 0 1 0 0 13 2 1551.7794 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8;F8VPY7;F8VWU8 F8WF16 78 90 PPHLN1 Periphilin-1 yes no 3 0.026842 51.591 By MS/MS 1 0 0 0 967 518 1073 2455 2296 2296 961 1 DNTRPGANSPEMWSEAIK RTDDVHAKDNTRPGAN EMWSEAIKILKGEYAV K D N I K I 2 1 2 1 0 0 2 1 0 1 0 1 1 0 2 2 1 1 0 0 0 0 18 1 2001.9214 F1T0B3;A0A087X2G1;Q92499 F1T0B3 392 409 DDX1 ATP-dependent RNA helicase DDX1 yes no 3 0.0055461 64.589 By MS/MS 2 0 0 0 968 149 1074 2456;2457 2297;2298 2298 260 2 DPAECPQAQLTDNANQLLLVSSR SPDCVPFRDPAECPQA QLLLVSSRAQELVACG R D P S R A 3 1 2 2 1 3 1 0 0 0 4 0 0 0 2 2 1 0 0 1 0 0 23 0 2539.2337 Q9ULL4 Q9ULL4 103 125 PLXNB3 Plexin-B3 yes yes 3 0.017833 41.711 By MS/MS By MS/MS 1 1 50448000 23758000 26691000 969 2850 1075 2458;2459 2299;2300 2299 5862;5863 2 DPAQPMSPGEATQSGAR ________________ EATQSGARPADRYGLL R D P A R P 3 1 0 1 0 2 1 2 0 0 0 0 1 0 3 2 1 0 0 0 0 0 17 0 1698.7631 Q9BQG0 Q9BQG0 5 21 MYBBP1A Myb-binding protein 1A yes yes 2 0.0041748 65.298 By MS/MS By MS/MS 2 2 25924000 13564000 12359000 970 2570 1076;1077 2460;2461;2462;2463 2301;2302;2303 2301 344 5186 3 DPAQPMSPGEATQSGARPADR ________________ SGARPADRYGLLKHSR R D P D R Y 4 2 0 2 0 2 1 2 0 0 0 0 1 0 4 2 1 0 0 0 0 0 21 1 2137.9811 Q9BQG0 Q9BQG0 5 25 MYBBP1A Myb-binding protein 1A yes yes 3 0.004626 53.554 By MS/MS By MS/MS 1 2 51207000 26237000 24969000 971 2570 1078 2464;2465;2466 2304;2305 2304 5186 2 DPKCPSR SCPVKLHRDPKCPSRY RDPKCPSRYHCTHEAG R D P S R Y 0 1 0 1 1 0 0 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 7 1 858.40179 J3KMX1;Q99567 J3KMX1 337 343 NUP88 Nuclear pore complex protein Nup88 yes no 2 0.026251 51.335 By MS/MS 1 0 0 0 972 1218 1079 2467 2306 2306 1 DPSPGPALPPNYK GTAEDEERDPSPGPAL PALPPNYKSSSSDSSD R D P Y K S 1 0 1 1 0 0 0 1 0 0 1 1 0 0 5 1 0 0 1 0 0 0 13 0 1351.6772 A0A0A0MRI1 A0A0A0MRI1 26 38 GPALPP1 yes yes 2 0.027631 44.309 By matching By MS/MS 1 1 3781300 1493800 2287500 973 186 1080 2468;2469 2307 2307 7199 0 DPWYSTVGLLPPVR DHGTGDRRDPWYSTVG VGLLPPVRAMSQRNLN R D P V R A 0 1 0 1 0 0 0 1 0 0 2 0 0 0 3 1 1 1 1 2 0 0 14 0 1598.8457 A0A0U1RQL9;A0A0U1RQN3;A0A0U1RQS5;B3KNS4;A0A0U1RQV1 A0A0U1RQL9 28 41 hCG_2043597 yes no 2 2.689E-21 162.38 By MS/MS By MS/MS 1 1 8296300 4603800 3692500 974 340 1081 2470;2471 2308;2309 2308 7244 2 DQDLEPGAPSMGAK WIKKTTARDQDLEPGA GAPSMGAKSLCIPFKP R D Q A K S 2 0 0 2 0 1 1 2 0 0 1 1 1 0 2 1 0 0 0 0 0 0 14 0 1414.6398 P07814 P07814 1464 1477 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 2 0.017615 63.091 By MS/MS By matching 1 1 3274100 1688600 1585600 975 1539 1082 2472;2473 2310 2310 1 DQDLFVQNCAALSSGAFWFR QKFSTFDRDQDLFVQN SSGAFWFRSCHFANLN R D Q F R S 3 1 1 2 1 2 0 1 0 0 2 0 0 3 0 2 0 1 0 1 0 0 20 0 2331.0743 K7ES70;P55083 K7ES70 216 235 MFAP4 Microfibril-associated glycoprotein 4 yes no 2 0.0089015 81.327 By MS/MS 1 4104300 0 4104300 976 1290 1083 2474 2311 2311 1 DQEPKPSPEPAAVSR GGGELDKKDQEPKPSP PEPAAVSRGGGGEPGA K D Q S R G 2 1 0 1 0 1 2 0 0 0 0 1 0 0 4 2 0 0 0 1 0 0 15 1 1606.7951 Q9H7S9 Q9H7S9 246 260 ZNF703 Zinc finger protein 703 yes yes 3 0.0004551 82.765 By MS/MS 1 17733000 17733000 0 977 2677 1084 2475 2312;2313 2312 5464 2 DQETSYTIIKSK YEIKYFEKDQETSYTI SYTIIKSKETTITAEG K D Q S K E 0 0 0 1 0 1 1 0 0 2 0 2 0 0 0 2 2 0 1 0 0 0 12 1 1411.7195 F8W9W0;F8VP57;B7ZKW7;B7ZKJ3;P54756 F8W9W0 346 357 EPHA5 Receptor protein-tyrosine kinase;Ephrin type-A receptor 5 yes no 2 0.021196 46.318 By MS/MS 1 0 0 0 978 523 1085 2476 2314 2314 964;965;7304 1 DQLEMYHMNQSTAMRQMVFMQK RLEVLGCKDQLEMYHM RQMVFMQKQVLSQRSS K D Q Q K Q 1 1 1 1 0 4 1 0 1 0 1 1 5 1 0 1 1 0 1 1 0 0 22 1 2746.2158 F8W1C8;Q8WXB4 F8W1C8 181 202 ZNF606 Zinc finger protein 606 yes no 3 0.026962 43.81 By MS/MS 1 0 0 0 979 930 1086 2477 2315 2315 7413 1 DQMEGSPNSSESFEHIAR PPKPLMRRDQMEGSPN ESFEHIARSARDHAIS R D Q A R S 1 1 1 1 0 1 3 1 1 1 0 0 1 1 1 4 0 0 0 0 0 0 18 0 2019.8592 E7EPN9;Q9Y520 E7EPN9 776 793 PRRC2C Protein PRRC2C yes no 3 0.0045883 59.502 By MS/MS By MS/MS 1 1 7868600 4445300 3423300 980 715 1087 2478;2479 2316;2317 2317 81 1268 2 DQPAFTPSGILTPHALGSR EKRKRMKRDQPAFTPS TPHALGSRNSPGSQVA R D Q S R N 2 1 0 1 0 1 0 2 1 1 2 0 0 1 3 2 2 0 0 0 0 0 19 0 1964.0116 Q9H0D6 Q9H0D6 428 446 XRN2 5-3 exoribonuclease 2 yes yes 3 0.00078577 73.546 By MS/MS By matching 1 1 7249200 4283300 2965900 981 2626 1088 2480;2481 2318 2318 7039 1 DQPAFTPSGILTPHALGSRNSPGSQVASNPR EKRKRMKRDQPAFTPS SQVASNPRQAAYEMRM R D Q P R Q 3 2 2 1 0 2 0 3 1 1 2 0 0 1 5 5 2 0 0 1 0 0 31 1 3158.5857 Q9H0D6 Q9H0D6 428 458 XRN2 5-3 exoribonuclease 2 yes yes 3 0.006753 46.2 By MS/MS 1 32302000 32302000 0 982 2626 1089 2482 2319 2319 5329;5330;7039 1 DQQNLPYGVTPASPSGHSQGR AGQLRQVRDQQNLPYG PSGHSQGRRGASGSIF R D Q G R R 1 1 1 1 0 3 0 3 1 0 1 0 0 0 3 3 1 0 1 1 0 0 21 0 2195.0356 E7ETY4;E9PC69;Q7KZI7 E7ETY4 527 547 MARK2 Serine/threonine-protein kinase MARK2 yes no 2;3 3.7817E-09 97.049 By MS/MS By MS/MS 3 3 39921000 22080000 17841000 983 738 1090 2483;2484;2485;2486;2487;2488 2320;2321;2322;2323 2321 1325;7368 4 DQVANSAFVER YYITGETKDQVANSAF ANSAFVERLRKHGLEV K D Q E R L 2 1 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1234.5942 P07900 P07900 500 510 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 6.2099E-23 182.16 By MS/MS By MS/MS 1 1 20901000 9542800 11358000 984 1540 1091 2489;2490 2324;2325 2324 2 DQVTEMAPKK EKPVKEEKDQVTEMAP VTEMAPKKTSKIASLI K D Q K K T 1 0 0 1 0 1 1 0 0 0 0 2 1 0 1 0 1 0 0 1 0 0 10 1 1145.5751 F8VZV4;Q8IVL0 F8VZV4 489 498 NAV3 Neuron navigator 3 yes no 2 0.0028821 94.114 By matching By MS/MS 1 1 9842900 6007700 3835200 985 927 1092 2491;2492 2326 2326 1 DQVTYQQLRER FFFDPSARDQVTYQQL TYQQLRERCVCDSETG R D Q E R C 0 2 0 1 0 3 1 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 11 1 1434.7215 A0A075B730;A0A087X1U6;P58107 A0A075B730 1385 1395 EPPK1 Epiplakin yes no 2 0.02157 50.46 By matching By MS/MS 1 1 20910000 10599000 10311000 986 11 1093 2493;2494 2327 2327 7153 0 DRAPQTLPSPEADALAGSK YGSPGELRDRAPQTLP ADALAGSKHKEEKADL R D R S K H 4 1 0 2 0 1 1 1 0 0 2 1 0 0 3 2 1 0 0 0 0 0 19 1 1922.9698 P31274 P31274 151 169 HOXC9 Homeobox protein Hox-C9 yes yes 3 0.0027609 60.618 By MS/MS 1 3036800 0 3036800 987 1656 1094 2495 2328 2328 3058 1 DRDASPSKEER AGELADKKDRDASPSK ASPSKEERKRSRTPDR K D R E R K 1 2 0 2 0 0 2 0 0 0 0 1 0 0 1 2 0 0 0 0 0 0 11 2 1288.6008 F8W1J5;F8VVA2;Q9BUQ8 F8W1J5 10 20 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 3 0.0083905 67.846 By MS/MS By MS/MS 1 1 29680000 9456400 20223000 988 920 1095 2496;2497 2329;2330 2330 1653;1654 2 DRFTWEGLYNVLMYR PLLVSVPRDRFTWEGL LYNVLMYRLSRYVTKP R D R Y R L 0 2 1 1 0 0 1 1 0 0 2 0 1 1 0 0 1 1 2 1 0 0 15 1 1961.9458 G5E9A6;P51784 G5E9A6 581 595 USP11 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 11 yes no 2 0.025216 43.628 By MS/MS 1 726610 726610 0 989 991 1096 2498 2331 2331 7430 0 DRLGSYSGPTSVSR ASAEGTRRDRLGSYSG SGPTSVSRQRVESLRK R D R S R Q 0 2 0 1 0 0 0 2 0 0 1 0 0 0 1 4 1 0 1 1 0 0 14 1 1480.727 V9GYZ0;Q9BZ23 V9GYZ0 62 75 PANK2 Pantothenate kinase 2, mitochondrial yes no 2;3 0.0003842 96.805 By MS/MS By MS/MS 2 1 42705000 33855000 8850400 990 2607 1097 2499;2500;2501 2332;2333;2334 2334 5278 3 DRNSWGGFSEK ________________ SWGGFSEKTYEWSSEE R D R E K T 0 1 1 1 0 0 1 2 0 0 0 1 0 1 0 2 0 1 0 0 0 0 11 1 1281.5738 G3V321;G3V5T4;Q8WXF7 G3V321 7 17 ATL1 Atlastin-1 yes no 2 0.00025015 111.66 By MS/MS By MS/MS 1 1 10021000 6465000 3555700 991 964 1098 2502;2503 2335;2336;2337;2338 2335 1757 4 DRNVIPDTPPSTPLVPSR VEDKQKVRDRNVIPDT STPLVPSRASSEWDIK R D R S R A 0 2 1 2 0 0 0 0 0 1 1 0 0 0 5 2 2 0 0 2 0 0 18 1 1960.0378 Q9UKA4 Q9UKA4 1093 1110 AKAP11 A-kinase anchor protein 11 yes yes 3 0.0027709 63.522 By MS/MS By matching 1 1 6022700 2925400 3097300 992 2827 1099 2504;2505 2339 2339 7090 1 DRPAMQLYQPGAR KRDRIRNKDRPAMQLY QLYQPGARSRNRLCPP K D R A R S 2 2 0 1 0 2 0 1 0 0 1 0 1 0 2 0 0 0 1 0 0 0 13 1 1501.746 Q9BZI7;A0A1B0GVA2 Q9BZI7 435 447 UPF3B Regulator of nonsense transcripts 3B yes no 2;3 6.1426E-11 132.79 By MS/MS By MS/MS 2 2 23161000 13046000 10115000 993 2610 1100 2506;2507;2508;2509 2340;2341;2342;2343 2340 7879 4 DRSFSEHDLAQLR CGEVTLKRDRSFSEHD EHDLAQLRSEVASGLQ R D R L R S 1 2 0 2 0 1 1 0 1 0 2 0 0 1 0 2 0 0 0 0 0 0 13 1 1572.7645 Q8WWL2 Q8WWL2 438 450 SPIRE2 Protein spire homolog 2 yes yes 3 0.017461 52.555 By MS/MS 1 2046900 2046900 0 994 2407 1101 2510 2344 2344 4815 1 DRSPSRLDTFLK LEHGIKRRDRSPSRLD SRLDTFLKGIEEERDY R D R L K G 0 2 0 2 0 0 0 0 0 0 2 1 0 1 1 2 1 0 0 0 0 0 12 2 1433.7627 Q66GS9 Q66GS9 437 448 CEP135 Centrosomal protein of 135 kDa yes yes 3 0.012076 62.799 By MS/MS By MS/MS 1 1 9329800 3780800 5549000 995 2129 1102 2511;2512 2345;2346 2346 4235 2 DRSSPPPGYIPDELHQVAR SIIGPTSRDRSSPPPG DELHQVARNGSFTSIN R D R A R N 1 2 0 2 0 1 1 1 1 1 1 0 0 0 4 2 0 0 1 1 0 0 19 1 2133.0603 Q9Y2U5 Q9Y2U5 161 179 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 yes yes 3 1.4997E-07 108.96 By MS/MS By MS/MS 1 1 17346000 7993600 9352600 996 2895 1103 2513;2514 2347;2348;2349 2349 6026;6027 3 DRTPPLLYR PDPLRGARDRTPPLLY RTPPLLYRDRDRDLYP R D R Y R D 0 2 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 1 0 0 0 9 1 1129.6244 A0A087WWP4;Q96T37 A0A087WWP4 522 530 RBM15 Putative RNA-binding protein 15 yes no 3 0.0040607 80.17 By MS/MS By MS/MS 2 2 14708000 5783300 8925200 997 81 1104 2515;2516;2517;2518 2350;2351;2352;2353 2350 6235 4 DRVLDDVSIRSPETK TTNKLYPKDRVLDDVS SIRSPETKCPKQNSIE K D R T K C 0 2 0 3 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 2 0 0 15 2 1728.9006 F5GXF5;E7ETD6;Q12830 F5GXF5 1227 1241 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 0.020124 52.009 By MS/MS By matching 1 1 11632000 6657800 4973900 998 736 1105 2519;2520 2354 2354 1320;1321 1 DSAIPVESDTDDEGAPR RKNVNIYRDSAIPVES TDDEGAPRISLAEMLE R D S P R I 2 1 0 4 0 0 2 1 0 1 0 0 0 0 2 2 1 0 0 1 0 0 17 0 1772.7701 C9JA08;Q96D46 C9JA08 461 477 NMD3 60S ribosomal export protein NMD3 yes no 2 4.5217E-22 144.73 By MS/MS By MS/MS 1 2 36743000 16553000 20190000 999 575 1106 2521;2522;2523 2355;2356;2357 2356 1053 3 DSALQDTDDSDDDPVLIPGAR AHEETSTRDSALQDTD PVLIPGARYRAGPGDR R D S A R Y 2 1 0 7 0 1 0 1 0 1 2 0 0 0 2 2 1 0 0 1 0 0 21 0 2213.9924 Q58WW2 Q58WW2 648 668 DCAF6 DDB1- and CUL4-associated factor 6 yes yes 2 4.7962E-05 80.96 By MS/MS By MS/MS 1 1 22886000 11948000 10938000 1000 2064 1107 2524;2525 2358;2359 2359 4053;6868 2 DSAPSTPTSPTEFLTPGLR PEESSQSRDSAPSTPT EFLTPGLRSIPPLFSG R D S L R S 1 1 0 1 0 0 1 1 0 0 2 0 0 1 4 3 4 0 0 0 0 0 19 0 1972.9742 Q9NZJ4 Q9NZJ4 4256 4274 SACS Sacsin yes yes 2;3 2.8354E-06 106.17 By MS/MS By MS/MS 2 2 39142000 20858000 18284000 1001 2768 1108;1109 2526;2527;2528;2529 2360;2361;2362 2361 5681;5682;7076 3 DSAPYGEYGSWYK EESKDKRRDSAPYGEY GEYGSWYKACKVDSPT R D S Y K A 1 0 0 1 0 0 1 2 0 0 0 1 0 0 1 2 0 1 3 0 0 0 13 0 1521.6412 Q9H0B6;A8MZ87 Q9H0B6 427 439 KLC2 Kinesin light chain 2 yes no 2 0.011131 58.63 By MS/MS By matching 1 1 3207300 2054100 1153200 1002 2625 1110 2530;2531 2363 2363 7885 1 DSAYQSITHYRPVSASR RERPMYGRDSAYQSIT YRPVSASRSSLDLSYY R D S S R S 2 2 0 1 0 1 0 0 1 1 0 0 0 0 1 4 1 0 2 1 0 0 17 1 1936.9391 P50402;Q5HY57 P50402 158 174 EMD Emerin yes no 3 0.0048554 56.29 By MS/MS By MS/MS 2 2 60681000 29396000 31286000 1003 1738 1111 2532;2533;2534;2535 2364;2365;2366 2364 7630;7631 3 DSDAGSSTPTTSTR KSSRKRKRDSDAGSST STPTTSTRSRDKDDES R D S T R S 1 1 0 2 0 0 0 1 0 0 0 0 0 0 1 4 4 0 0 0 0 0 14 0 1381.5957 Q9HBD4;A0A0A0MT49;P51532;K7EP28 Q9HBD4 1448 1461 SMARCA4 Transcription activator BRG1 yes no 2 0.0018695 107.69 By matching By MS/MS 1 1 6798200 4344700 2453500 1004 237 1112 2536;2537 2367 2367 6288 1 DSDYVYPSLESDEDNPIFK DHLDACFKDSDYVYPS DEDNPIFKSRSKKRKG K D S F K S 0 0 1 4 0 0 2 0 0 1 1 1 0 1 2 3 0 0 2 1 0 0 19 0 2231.9746 O75151;E7ET14;A0A087WW48 O75151 872 890 PHF2 Lysine-specific demethylase PHF2 yes no 2;3 5.3289E-28 142.94 By MS/MS By MS/MS 2 2 106950000 56783000 50167000 1005 1430 1113 2538;2539;2540;2541 2368;2369;2370;2371 2370 2632 4 DSENLASPSEYPENGER NLFSPVNRDSENLASP EYPENGERFSFLSKPV R D S E R F 1 1 2 1 0 0 4 1 0 0 1 0 0 0 2 3 0 0 1 0 0 0 17 0 1892.8024 P52948 P52948 617 633 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 2;3 2.7623E-192 252.1 By MS/MS By MS/MS 4 4 181770000 96423000 85351000 1006 1759 1114;1115 2542;2543;2544;2545;2546;2547;2548;2549 2372;2373;2374;2375;2376;2377 2373 18 3318;3319;3320 6 DSEVNFKELRTAK ATSGDRQRDSEVNFKE FKELRTAKMKPELLSG R D S A K M 1 1 1 1 0 0 2 0 0 0 1 2 0 1 0 1 1 0 0 1 0 0 13 2 1535.7944 A1BQX2;A0A0G2JQ38;D6RA09;A0A0G2JN23;Q8N4S9 A1BQX2 290 302 MARVELD2 MARVEL domain-containing protein 2 yes no 2 0.012022 52.167 By MS/MS By matching 1 1 22417000 10890000 11527000 1007 325 1116 2550;2551 2378 2378 0 DSFSHSPGAVSSLK LSRSDVFRDSFSHSPG PGAVSSLKVFTGLAAP R D S L K V 1 0 0 1 0 0 0 1 1 0 1 1 0 1 1 5 0 0 0 1 0 0 14 0 1417.6838 Q9H6R7 Q9H6R7 685 698 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes yes 2;3 0.00069189 86.189 By MS/MS By MS/MS 2 2 50310000 24052000 26258000 1008 2668 1117 2552;2553;2554;2555 2379;2380;2381;2382 2380 5443;5444 4 DSGIITPEKELK SEGKNSNKDSGIITPE ITPEKELKVSVAGGTQ K D S L K V 0 0 0 1 0 0 2 1 0 2 1 2 0 0 1 1 1 0 0 0 0 0 12 1 1328.7187 E7EVZ1 E7EVZ1 1143 1154 ZFHX4 yes yes 2 0.0229 85.45 By MS/MS By MS/MS 1 1 4828000 2862100 1965900 1009 745 1118 2556;2557 2383;2384 2384 2 DSGPLPTPPGVSLLGEPPK SGLRGLQKDSGPLPTP SLLGEPPKDYRIPLNP K D S P K D 0 0 0 1 0 0 1 3 0 0 3 1 0 0 6 2 1 0 0 1 0 0 19 0 1856.9884 A0A087WZ13;E9PAU2 A0A087WZ13 482 500 RAVER1 yes no 2 0.00839 57.499 By matching By MS/MS 1 1 7172100 4130400 3041700 1010 104 1119 2558;2559 2385 2385 195;6242 1 DSGPLPTPPGVSLLGEPPKDYR SGLRGLQKDSGPLPTP GEPPKDYRIPLNPYLN K D S Y R I 0 1 0 2 0 0 1 3 0 0 3 1 0 0 6 2 1 0 1 1 0 0 22 1 2291.1798 A0A087WZ13;E9PAU2 A0A087WZ13 482 503 RAVER1 yes no 3 0.00010484 74.776 By MS/MS By MS/MS 1 1 36057000 23416000 12641000 1011 104 1120 2560;2561 2386;2387;2388;2389 2388 195;6242 4 DSGRGDSVSDSGSDALR RLRKNSSRDSGRGDSV DSGSDALRSGLTVPTS R D S L R S 1 2 0 4 0 0 0 3 0 0 1 0 0 0 0 5 0 0 0 1 0 0 17 1 1679.7347 Q53EL6;Q5VZS7 Q53EL6 70 86 PDCD4 Programmed cell death protein 4 yes no 2;3 5.008E-05 87.323 By MS/MS By MS/MS 1 2 60436000 15032000 45403000 1012 2053 1121 2562;2563;2564 2390;2391;2392 2392 4033 3 DSGRLSPDLSVCGQPR RLPPFPSRDSGRLSPD LSVCGQPRDGDELGIS R D S P R D 0 2 0 2 1 1 0 2 0 0 2 0 0 0 2 3 0 0 0 1 0 0 16 1 1742.837 Q8TF76 Q8TF76 142 157 GSG2 Serine/threonine-protein kinase haspin yes yes 3 0.00062189 76.118 By MS/MS By MS/MS 1 1 6482900 3114300 3368500 1013 2395 1122 2565;2566 2393;2394 2393 4789;4790 2 DSGSISLQETR SSFLSKTKDSGSISLQ SISLQETRRQKKTLKK K D S T R R 0 1 0 1 0 1 1 1 0 1 1 0 0 0 0 3 1 0 0 0 0 0 11 0 1191.5731 Q9H2G2 Q9H2G2 776 786 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.00012476 114.87 By MS/MS By MS/MS 1 1 32517000 17348000 15169000 1014 2643 1123 2567;2568 2395;2396 2395 5383;5384 2 DSGSQEVLSELR PAGSQETKDSGSQEVL QEVLSELRVLSQKLKE K D S L R V 0 1 0 1 0 1 2 1 0 0 2 0 0 0 0 3 0 0 0 1 0 0 12 0 1318.6365 Q9BVJ6;X6RJY0 Q9BVJ6 450 461 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 0.0012025 99.669 By MS/MS By MS/MS 1 1 5299300 2669900 2629500 1015 2586 1124 2569;2570 2397;2398 2397 5225;5226 2 DSHSSEEDEASSQTDLSQTISK VMTRRGLRDSHSSEED DLSQTISKKTVRSIQE R D S S K K 1 0 0 3 0 2 3 0 1 1 1 1 0 0 0 7 2 0 0 0 0 0 22 0 2380.015 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 32 53 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 5.1769E-09 89.831 By MS/MS By MS/MS 1 1 45934000 27596000 18338000 1016 218 1125 2571;2572 2399;2400 2400 393;394;395;396 2 DSHSSEEDEASSQTDLSQTISKK VMTRRGLRDSHSSEED LSQTISKKTVRSIQEA R D S K K T 1 0 0 3 0 2 3 0 1 1 1 2 0 0 0 7 2 0 0 0 0 0 23 1 2508.11 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 32 54 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.00093962 56.428 By matching By MS/MS 1 1 61449000 34359000 27090000 1017 218 1126 2573;2574 2401;2402 2402 393;394;395;396 2 DSITPDIATKPGQPLFLDSISPK EVHRGLRRDSITPDIA FLDSISPKKSFKTRKQ R D S P K K 1 0 0 3 0 1 0 1 0 3 2 2 0 1 4 3 2 0 0 0 0 0 23 1 2439.2897 Q2TB10 Q2TB10 316 338 ZNF800 Zinc finger protein 800 yes yes 3 0.00055223 62.582 By MS/MS 1 8719300 8719300 0 1018 2033 1127 2575 2403;2404 2404 3970;3971 2 DSLSPVLHPSDLILTR ALDAGTAKDSLSPVLH PSDLILTRGTLDEEDE K D S T R G 0 1 0 2 0 0 0 0 1 1 4 0 0 0 2 3 1 0 0 1 0 0 16 0 1761.9625 Q9HCN4 Q9HCN4 311 326 GPN1 GPN-loop GTPase 1 yes yes 2;3 0.00070031 75.02 By MS/MS By MS/MS 2 1 25034000 20115000 4919100 1019 2697 1128 2576;2577;2578 2405;2406;2407 2407 5505 3 DSMSAAEVGTGQYATTK ENHEIYMKDSMSAAEV TGQYATTKGISQTNLI K D S T K G 3 0 0 1 0 1 1 2 0 0 0 1 1 0 0 2 3 0 1 1 0 0 17 0 1715.7672 A0A0A0MRA8;A0A0A0MSA4;A8K968;J3KT37;A0A1B0GTF8;A0A0J9YW26 A0A0A0MRA8 459 475 EPB41L3 yes no 2 2.5474E-142 230.81 By MS/MS By MS/MS 2 2 57521000 26890000 30632000 1020 175 1129;1130 2579;2580;2581;2582 2408;2409;2410;2411 2410 19 6266;7193 4 DSNAPKSPLTGYVR RKRKKPLRDSNAPKSP SPLTGYVRFMNERREQ R D S V R F 1 1 1 1 0 0 0 1 0 0 1 1 0 0 2 2 1 0 1 1 0 0 14 1 1503.7682 H0YNS8;H0YKM5;Q9NP66 H0YNS8 99 112 HMG20A High mobility group protein 20A yes no 2 0.00086275 104.78 By MS/MS By MS/MS 1 1 43690000 23278000 20413000 1021 1088 1131 2583;2584 2412;2413 2412 2004 2 DSNPYATLPR SSLSRQSKDSNPYATL NPYATLPRASSVISTA K D S P R A 1 1 1 1 0 0 0 0 0 0 1 0 0 0 2 1 1 0 1 0 0 0 10 0 1132.5513 Q3V6T2;H0Y7K3;H0Y470;H7C2C6 Q3V6T2 1795 1804 CCDC88A Girdin yes no 2 0.029231 51.445 By MS/MS By MS/MS 1 1 7738900 4211500 3527400 1022 2040 1132 2585;2586 2414;2415 2415 7732 2 DSPAFPDSPWR AQVSPGPRDSPAFPDS AFPDSPWRERVLAPIL R D S W R E 1 1 0 2 0 0 0 0 0 0 0 0 0 1 3 2 0 1 0 0 0 0 11 0 1273.5728 Q9NQS7 Q9NQS7 268 278 INCENP Inner centromere protein yes yes 2 0.014019 66.267 By MS/MS 1 1176300 0 1176300 1023 2712 1133 2587 2416 2416 5527 1 DSPAFPDSPWRER AQVSPGPRDSPAFPDS PDSPWRERVLAPILPD R D S E R V 1 2 0 2 0 0 1 0 0 0 0 0 0 1 3 2 0 1 0 0 0 0 13 1 1558.7165 Q9NQS7 Q9NQS7 268 280 INCENP Inner centromere protein yes yes 2;3 0.0017239 99.568 By MS/MS By MS/MS 2 2 15921000 9034300 6886400 1024 2712 1134 2588;2589;2590;2591 2417;2418 2417 5527 2 DSPLQGSGQQNSQAGQR RSPVLSRRDSPLQGSG QNSQAGQRNSTSSIEP R D S Q R N 1 1 1 1 0 5 0 3 0 0 1 0 0 0 1 3 0 0 0 0 0 0 17 0 1756.8089 C9J840;E7EX83;A0A0D9SG62;H7C0P6;E7ENQ1;G3XAA2;H7C360;G5E948;E7EN19;A0A0D9SEY1;O95819 C9J840 382 398 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 2 0.010509 54.784 By MS/MS 1 22981000 22981000 0 1025 310 1135 2592 2419 2419 560;561 1 DSPPTPTMYK EDSSLLAKDSPPTPTM PPTPTMYKYRPGYSSS K D S Y K Y 0 0 0 1 0 0 0 0 0 0 0 1 1 0 3 1 2 0 1 0 0 0 10 0 1135.522 Q9C0B5;H0YEF4 Q9C0B5 344 353 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase yes no 2 0.027609 60.691 By MS/MS 1 1485500 1485500 0 1026 2614 1136 2593 2420 2420 0 DSPTLSNSGIR VERRRRPRDSPTLSNS TLSNSGIRATSRTAKQ R D S I R A 0 1 1 1 0 0 0 1 0 1 1 0 0 0 1 3 1 0 0 0 0 0 11 0 1145.5677 Q9HD20 Q9HD20 898 908 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 2 0.010488 69.261 By MS/MS By MS/MS 1 1 11252000 5308600 5943500 1027 2699 1137 2594;2595 2421;2422 2421 5507 2 DSPVLIDFFEDTER SSALANTKDSPVLIDF DFFEDTERYRKQANKA K D S E R Y 0 1 0 3 0 0 2 0 0 1 1 0 0 2 1 1 1 0 0 1 0 0 14 0 1681.7835 P04196 P04196 140 153 HRG Histidine-rich glycoprotein yes yes 2 0.00814 67.879 By MS/MS 1 1311300 0 1311300 1028 1521 1138 2596 2423 2423 1 DSQDASAEQSDHDDEVASLASASGGFGTKVPAPR PYHLLQQRDSQDASAE GTKVPAPRLPAKDWKT R D S P R L 6 1 0 5 0 2 2 3 1 0 1 1 0 1 2 6 1 0 0 2 0 0 34 1 3401.5244 Q6P2E9 Q6P2E9 870 903 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 4 3.1259E-08 70.109 By MS/MS By MS/MS 1 1 33950000 16020000 17930000 1029 2153 1139 2597;2598 2424;2425 2425 4288;4289 2 DSRVSTSSQESK PSARPEKRDSRVSTSS STSSQESKTTNVRQTY R D S S K T 0 1 0 1 0 1 1 0 0 0 0 1 0 0 0 5 1 0 0 1 0 0 12 1 1309.611 H0YJA2;Q6PJT7;G3V256;G3V572;G3V3R9;G3V3Y4 H0YJA2 44 55 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 2 0.0054234 77.204 By MS/MS 1 7657900 7657900 0 1030 1080 1140 2599 2426 2426 1995;1996 1 DSSDSADGRATPSENLVPSSAR IPPRAHSRDSSDSADG NLVPSSARVDKPPSVL R D S A R V 3 2 1 3 0 0 1 1 0 0 1 0 0 0 2 6 1 0 0 1 0 0 22 1 2218.0098 F5H6M0;F5H047;F5H669;Q8N684 F5H6M0 184 205 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 3 0.0034393 54.117 By MS/MS By MS/MS 1 1 41791000 20519000 21272000 1031 870 1141 2600;2601 2427;2428;2429 2427 1565;6464 3 DSSFTEVPRSPK STFSFSGRDSSFTEVP TEVPRSPKHAHSSSLQ R D S P K H 0 1 0 1 0 0 1 0 0 0 0 1 0 1 2 3 1 0 0 1 0 0 12 1 1348.6623 O95425 O95425 236 247 SVIL Supervillin yes yes 2;3 0.0015601 82.908 By MS/MS By MS/MS 2 3 17664000 9440100 8224200 1032 1489 1142 2602;2603;2604;2605;2606 2430;2431;2432;2433;2434 2433 2759 5 DSSIIDPGTEQDLPSPENSSVK STSDNETRDSSIIDPG SPENSSVKEYRMEVPS R D S V K E 0 0 1 3 0 1 2 1 0 2 1 1 0 0 3 5 1 0 0 1 0 0 22 0 2314.0812 H7C150;H7C183;Q70CQ2 H7C150 270 291 USP34 Ubiquitin carboxyl-terminal hydrolase 34 yes no 3 0.0047371 51.22 By matching By MS/MS 1 1 5144800 3072200 2072700 1033 1166 1143 2607;2608 2435 2435 2117;2118;2119 1 DSSSSLTDPQVSYVK PSGLPEFKDSSSSLTD DPQVSYVKSPAAERRS K D S V K S 0 0 0 2 0 1 0 0 0 0 1 1 0 0 1 5 1 0 1 2 0 0 15 0 1611.7628 H7C3M7;O94887 H7C3M7 111 125 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 yes no 2 0.0008616 79.492 By MS/MS By matching 1 1 3183400 1551700 1631700 1034 1183 1144 2609;2610 2436;2437 2436 7470 2 DSSTCPGDYVLSVSENSR RHGMFLVRDSSTCPGD LSVSENSRVSHYIINS R D S S R V 0 1 1 2 1 0 1 1 0 0 1 0 0 0 1 5 1 0 1 2 0 0 18 0 1971.848 P46109 P46109 40 57 CRKL Crk-like protein yes yes 2 0.0024522 68.171 By matching By MS/MS 1 1 9014800 5289200 3725600 1035 1709 1145 2611;2612 2438 2438 3167;6704 1 DSTEAPKPKSSPEQPIGQGR TASLPPRRDSTEAPKP EQPIGQGRIRVGTQLR R D S G R I 1 1 0 1 0 2 2 2 0 1 0 2 0 0 4 3 1 0 0 0 0 0 20 2 2108.0498 Q8N201 Q8N201 1317 1336 INTS1 Integrator complex subunit 1 yes yes 3 0.011387 50.132 By matching By MS/MS 1 1 5330400 2713200 2617200 1036 2299 1146 2613;2614 2439;2440 2440 4621;4622 2 DSTLIMQLLR TLSEESYKDSTLIMQL TLIMQLLRDNLTLWTS K D S L R D 0 1 0 1 0 1 0 0 0 1 3 0 1 0 0 1 1 0 0 0 0 0 10 0 1188.6536 E7EX29;P63104;P27348;Q04917;P61981;P31947;B7Z2E6;H0YB80;B0AZS6;P62258;K7EM20;P31946 P62258 216 225 YWHAZ;YWHAQ;YWHAH;YWHAG;SFN;YWHAE;YWHAB 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein sigma;14-3-3 protein epsilon;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 2 6.261E-05 138.06 By MS/MS By matching 1 1 2391600 1349400 1042200 1037 1793;751;1663 1147 2615;2616 2441 2441 1 DSYVGDEAQSK VMVGMGQKDSYVGDEA VGDEAQSKRGILTLKY K D S S K R 1 0 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 11 0 1197.515 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;C9JTX5;C9JUM1;C9JZR7;P63267;P68133;P68032;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 51 61 ACTG1;ACTB;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 2 0.0045462 89.08 By MS/MS By MS/MS 1 1 9995000 4194500 5800600 1038 1785;1799 1148 2617;2618 2442;2443 2442 2 DSYVGDEAQSKR VMVGMGQKDSYVGDEA GDEAQSKRGILTLKYP K D S K R G 1 1 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 12 1 1353.6161 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;C9JTX5;C9JUM1;C9JZR7;P63267;P68133;P68032;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 51 62 ACTG1;ACTB;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 3 0.0010349 77.597 By MS/MS By MS/MS 2 2 7496500 1876700 5619800 1039 1785;1799 1149 2619;2620;2621;2622 2444;2445;2446 2445 3 DTASLSTTPSESPR RGVQVLPRDTASLSTT TTPSESPRAQATSRLS R D T P R A 1 1 0 1 0 0 1 0 0 0 1 0 0 0 2 4 3 0 0 0 0 0 14 0 1447.6791 H0YJ30;G3V582;F5H039;Q9NQX3 H0YJ30 192 205 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 2 2.3293E-16 150.76 By MS/MS By matching 1 1 9682800 4863600 4819200 1040 869 1150 2623;2624 2447 2447 1564 1 DTDGGPKEEESPV AAESPDQKDTDGGPKE PKEEESPV________ K D T P V - 0 0 0 2 0 0 3 2 0 0 0 1 0 0 2 1 1 0 0 1 0 0 13 1 1358.5838 P53985 P53985 488 500 SLC16A1 Monocarboxylate transporter 1 yes yes 2 1.7259E-10 141.73 By MS/MS By MS/MS 2 1 15570000 9574500 5995800 1041 1764 1151 2625;2626;2627 2448;2449;2450;2451;2452;2453 2449 3329 6 DTEEPLPVKESDQTLAALLSPK SNNNLVSKDTEEPLPV LAALLSPKESSGGEKE K D T P K E 2 0 0 2 0 1 3 0 0 0 4 2 0 0 3 2 2 0 0 1 0 0 22 1 2380.2373 P18583;H7C1M2 P18583 1678 1699 SON Protein SON yes no 3 1.0962E-09 97.295 By MS/MS By MS/MS 1 1 14669000 7592700 7076100 1042 1600 1152 2628;2629 2454;2455 2454 2938;6679 2 DTESCTSPCLLGAPR RLHHPLRKDTESCTSP PCLLGAPRKAQDPSSA K D T P R K 1 1 0 1 2 0 1 1 0 0 2 0 0 0 2 2 2 0 0 0 0 0 15 0 1662.7342 H7BZH1;Q5THK1 H7BZH1 148 162 PRR14L Protein PRR14L yes no 2 0.0022663 73.802 By MS/MS By MS/MS 1 1 6602200 3379600 3222600 1043 1159 1153 2630;2631 2456;2457 2456 2108 1 DTGKTPVEPEVAIHR ________________ EPEVAIHRIRITLTSR K D T H R I 1 1 0 1 0 0 2 1 1 1 0 1 0 0 2 0 2 0 0 2 0 0 15 1 1647.858 P60866;E5RIP1;E5RJX2 P60866 5 19 RPS20 40S ribosomal protein S20 yes no 3 0.00020736 100.46 By MS/MS By MS/MS 1 1 13896000 7679500 6216800 1044 1787 1154 2632;2633 2458;2459 2458 6743 2 DTGPEDSYSSSAIHR IEADTKPRDTGPEDSY YSSSAIHRKLKTCSSM R D T H R K 1 1 0 2 0 0 1 1 1 1 0 0 0 0 1 4 1 0 1 0 0 0 15 0 1620.7016 G3V4T7;Q96NE9;G3V2L4;H0YJC1 G3V4T7 328 342 FRMD6 FERM domain-containing protein 6 yes no 3 0.010045 54.598 By matching By MS/MS 1 1 4464600 2018000 2446600 1045 976 1155 2634;2635 2460 2460 1777 1 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK ________________ SLPEQEIKTLEEDEEE K D T I K T 0 0 2 5 0 2 6 0 3 2 1 1 0 1 3 3 4 0 0 1 0 0 34 0 3932.7097 C9JJ34;P43487 C9JJ34 6 39 RANBP1 Ran-specific GTPase-activating protein yes no 4 0.00011164 56.252 By MS/MS 1 54701000 0 54701000 1046 594 1156 2636 2461 2461 6379 1 DTIIDVVGAPLTPNSR PGLGPDPKDTIIDVVG APLTPNSRKRRESASS K D T S R K 1 1 1 2 0 0 0 1 0 2 1 0 0 0 2 1 2 0 0 2 0 0 16 0 1666.889 Q9NPF5 Q9NPF5 434 449 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 2 2.1273E-08 109.36 By MS/MS By MS/MS 1 1 39334000 23986000 15348000 1047 2705 1157 2637;2638 2462;2463 2463 5515;7057 1 DTIIDVVGAPLTPNSRK PGLGPDPKDTIIDVVG PLTPNSRKRRESASSS K D T R K R 1 1 1 2 0 0 0 1 0 2 1 1 0 0 2 1 2 0 0 2 0 0 17 1 1794.984 Q9NPF5 Q9NPF5 434 450 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 3 1.3104E-05 90.765 By MS/MS By MS/MS 1 1 3248200 1849600 1398600 1048 2705 1158 2639;2640 2464;2465;2466 2464 5515;7057 3 DTISYTELDFELIK VRIDIMEKDTISYTEL ELDFELIKVEVKEMEK K D T I K V 0 0 0 2 0 0 2 0 0 2 2 1 0 1 0 1 2 0 1 0 0 0 14 0 1685.84 Q6UX06 Q6UX06 147 160 OLFM4 Olfactomedin-4 yes yes 2 1.6225E-88 209.97 By MS/MS By MS/MS 1 1 47684000 23225000 24459000 1049 2170 1159 2641;2642 2467;2468 2468 2 DTSATSQSVNGSPQAEQPSLESTSK EEGGVDAKDTSATSQS PSLESTSKEAFFSRVE K D T S K E 2 0 1 1 0 3 2 1 0 0 1 1 0 0 2 7 3 0 0 1 0 0 25 0 2535.1572 C9J0I9;Q86WB0;F8WAU5 C9J0I9 51 75 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.011023 48.899 By matching By MS/MS 1 1 6608800 3037500 3571400 1050 551 1160 2643;2644 2469 2469 1001 1 DTSFTVCPDVPRTPVGK MLNLLLERDTSFTVCP VPRTPVGKFLGDSANL R D T G K F 0 1 0 2 1 0 0 1 0 0 0 1 0 1 3 1 3 0 0 3 0 0 17 1 1874.9196 P30307;D6RJC2;D6RD20 P30307 36 52 CDC25C M-phase inducer phosphatase 3 yes no 3 0.0034341 62.362 By matching By MS/MS 1 1 5336700 2502500 2834200 1051 1654 1161 2645;2646 2470 2470 6694 1 DTSPSSGSAVSSSK VQSLKTSRDTSPSSGS GSAVSSSKVLDKPSRL R D T S K V 1 0 0 1 0 0 0 1 0 0 0 1 0 0 1 7 1 0 0 1 0 0 14 0 1295.5841 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8 F8WF16 136 149 PPHLN1 Periphilin-1 yes no 2 0.0013492 86.114 By MS/MS By MS/MS 1 1 25397000 14715000 10682000 1052 518 1162 2647;2648 2471;2472;2473;2474 2472 962 4 DTTVISHSPNTSYDTALEAR AATVAAQRDTTVISHS YDTALEARIQKEEEEI R D T A R I 2 1 1 2 0 0 1 0 1 1 1 0 0 0 1 3 4 0 1 1 0 0 20 0 2177.0237 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 707 726 AMOT Angiomotin yes no 2;3 5.027E-58 165.17 By MS/MS By MS/MS 4 4 908340000 453350000 455000000 1053 2051 1163;1164 2649;2650;2651;2652;2653;2654;2655;2656 2475;2476;2477;2478;2479;2480;2481;2482 2479 4022;4023;4024;6861;7735 8 DTVIIVSEPSEDEESQGLPTMAR VQEKTFNKDTVIIVSE QGLPTMARRNDDISEL K D T A R R 1 1 0 2 0 1 4 1 0 2 1 0 1 0 2 3 2 0 0 2 0 0 23 0 2502.1796 D6RAY8;Q9H4L7 D6RAY8 118 140 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 0.011761 45.011 By MS/MS By MS/MS 2 1 19035000 13574000 5460800 1054 653 1165;1166 2657;2658;2659 2483;2484 2483 73 1175;1176;1177 2 DTYSDRSGSSSPDSEITELKFPSINHD KGCRLSPRDTYSDRSG KFPSINHD________ R D T H D - 0 1 1 4 0 0 2 1 1 2 1 1 0 1 2 7 2 0 1 0 0 0 27 2 2983.3319 P17812 P17812 565 591 CTPS1 CTP synthase 1 yes yes 3;4 0.0017831 56.468 By MS/MS By matching 3 3 190410000 97257000 93155000 1055 1596 1167;1168 2660;2661;2662;2663;2664;2665 2485;2486;2487 2486 2929;2930;2931;2932;2933 3 DTYVSSFPR RKDETNARDTYVSSFP TYVSSFPRAPSTSDSV R D T P R A 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 2 1 0 1 1 0 0 9 0 1070.5033 P23193 P23193 124 132 TCEA1 Transcription elongation factor A protein 1 yes yes 2 0.0018846 95.815 By MS/MS By MS/MS 1 1 4968800 2751900 2216800 1056 1619 1169 2666;2667 2488;2489 2489 7578 1 DVATSPISPTENNTTPPDALTR PLPVTPTRDVATSPIS TPPDALTRNTEKQKKK R D V T R N 2 1 2 2 0 0 1 0 0 1 1 0 0 0 4 2 5 0 0 1 0 0 22 0 2296.1183 H0YCM0;E9PM17;B3KNX7;Q13153 H0YCM0 107 128 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 2;3 7.2236E-06 84.759 By MS/MS By MS/MS 3 4 56322000 26596000 29726000 1057 473 1170 2668;2669;2670;2671;2672;2673;2674 2490;2491;2492;2493 2490 901;902;6344;6345 4 DVDASPSPLSVQDLK PPAELVQRDVDASPSP PLSVQDLKGLGYEKGK R D V L K G 1 0 0 3 0 1 0 0 0 0 2 1 0 0 2 3 0 0 0 2 0 0 15 0 1569.7886 Q8IWZ8 Q8IWZ8 405 419 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 2;3 2.7221E-09 122.55 By MS/MS By MS/MS 3 2 43348000 25823000 17526000 1058 2274 1171;1172 2675;2676;2677;2678;2679 2494;2495;2496;2497;2498 2496 4571;4572 4 DVDASPSPLSVQDLKGLGYEK PPAELVQRDVDASPSP LKGLGYEKGKPVGLVG R D V E K G 1 0 0 3 0 1 1 2 0 0 3 2 0 0 2 3 0 0 1 2 0 0 21 1 2217.1165 Q8IWZ8 Q8IWZ8 405 425 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 3 0.0020722 58.49 By matching By MS/MS 1 1 3496800 1712800 1784100 1059 2274 1173 2680;2681 2499 2499 4571;4572 1 DVDDGSGSPHSPHQLSSK PEAAFLSRDVDDGSGS SPHQLSSKSLPSQNLS R D V S K S 0 0 0 3 0 1 0 2 2 0 1 1 0 0 2 5 0 0 0 1 0 0 18 0 1848.8238 F5GWT4;Q9H4A3 F5GWT4 1774 1791 WNK1 Serine/threonine-protein kinase WNK1 yes no 2 0.023213 49.463 By MS/MS By matching 1 1 6449700 3176800 3273000 1060 859 1174 2682;2683 2500 2500 1 DVDETGITVASLER DLSLYIPRDVDETGIT ITVASLERFSTYTSDK R D V E R F 1 1 0 2 0 0 2 1 0 1 1 0 0 0 0 1 2 0 0 2 0 0 14 0 1503.7417 H7C466;Q8WU90 H7C466 19 32 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 2 0.003359 74.296 By MS/MS By matching 1 1 3878600 2251600 1627000 1061 1186 1175 2684;2685 2501 2501 2150 1 DVDLEFLAK LRKSPVAKDVDLEFLA VDLEFLAKMTNGFSGA K D V A K M 1 0 0 2 0 0 1 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 9 0 1048.5441 P55072 P55072 669 677 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.011508 81.548 By MS/MS By matching 1 1 1570400 867210 703140 1062 1771 1176 2686;2687 2502 2502 1 DVEDMELSDVEDDGSK PEPVTDNRDVEDMELS DVEDDGSKIIVEDRKE R D V S K I 0 0 0 5 0 0 3 1 0 0 1 1 1 0 0 2 0 0 0 2 0 0 16 0 1781.7149 Q5VT52 Q5VT52 367 382 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 2.2442E-85 208.38 By MS/MS By MS/MS 2 2 78279000 39439000 38840000 1063 2115 1177;1178 2688;2689;2690;2691 2503;2504;2505;2506;2507 2506 284 4189 5 DVESPSWR INRSLASKDVESPSWR DVESPSWRSTTVLGLL K D V W R S 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 2 0 1 0 1 0 0 8 0 974.44576 F5H6E2;O00159 F5H6E2 381 388 MYO1C Unconventional myosin-Ic yes no 2 0.0050254 120.99 By MS/MS By MS/MS 1 1 4954600 2238000 2716600 1064 892 1179 2692;2693 2508;2509 2508 1600 2 DVFLGMFLYEYAR CKNYAEAKDVFLGMFL MFLYEYARRHPDYSVV K D V A R R 1 1 0 1 0 0 1 1 0 0 2 0 1 2 0 0 0 0 2 1 0 0 13 0 1622.7803 CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;A0A0C4DGB6;C9JKR2 CON__P02768-1 348 360 ALB Serum albumin yes no 2 2.1271E-10 131.12 By MS/MS By MS/MS 6 10 391570000 213330000 178240000 + 1065 633 1180;1181 2694;2695;2696;2697;2698;2699;2700;2701;2702;2703;2704;2705;2706;2707;2708;2709 2510;2511;2512;2513;2514;2515;2516;2517;2518;2519;2520;2521;2522;2523 2510 70 11 DVGILALEVYFPAQYVDQTDLEK AKTDTWPKDVGILALE VDQTDLEKYNNVEAGK K D V E K Y 2 0 0 3 0 2 2 1 0 1 3 1 0 1 1 0 1 0 2 3 0 0 23 0 2625.3214 P54868 P54868 53 75 HMGCS2 Hydroxymethylglutaryl-CoA synthase, mitochondrial yes yes 2 0.004042 58.071 By MS/MS 1 5247300 5247300 0 1066 1769 1182 2710 2524 2524 1 DVIEEYFK YGKESQAKDVIEEYFK DVIEEYFKCKK_____ K D V F K C 0 0 0 1 0 0 2 0 0 1 0 1 0 1 0 0 0 0 1 1 0 0 8 0 1041.5019 P25398 P25398 122 129 RPS12 40S ribosomal protein S12 yes yes 2 0.028295 77.282 By matching By MS/MS 1 1 4884900 2268400 2616500 1067 1631 1183 2711;2712 2525 2525 1 DVLSLLNLSPR PGTMTSKRDVLSLLNL SLLNLSPRHNKKEEGV R D V P R H 0 1 1 1 0 0 0 0 0 0 4 0 0 0 1 2 0 0 0 1 0 0 11 0 1225.703 Q96AY4;A0A087WW06 Q96AY4 2390 2400 TTC28 Tetratricopeptide repeat protein 28 yes no 2 0.00015219 113.52 By MS/MS By MS/MS 1 1 1913700 1312200 601430 1068 2459 1184 2713;2714 2526;2527 2526 4949 2 DVLSVAFSSDNR RRFVGHTKDVLSVAFS VAFSSDNRQIVSGSRD K D V N R Q 1 1 1 2 0 0 0 0 0 0 1 0 0 1 0 3 0 0 0 2 0 0 12 0 1308.631 D6RAU2;E9PD14;D6RFX4;D6RFZ9;D6RHH4;D6R9Z1;D6R9L0;P63244;H0YAF8;J3KPE3;H0Y8W2;H0YAM7 D6RAU2 107 118 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.010983 73.067 By MS/MS By matching 1 1 1949900 1157600 792280 1069 645 1185 2715;2716 2528 2528 1 DVMASAALAAEPSPLPGSLIR KKRENKKRDVMASAAL PLPGSLIRGQRKSASS R D V I R G 5 1 0 1 0 0 1 1 0 1 3 0 1 0 3 3 0 0 0 1 0 0 21 0 2065.0878 Q5TBI2;Q8NDD1;Q5TBH9 Q5TBI2 44 64 C1orf131 Uncharacterized protein C1orf131 yes no 3 0.028593 44.258 By MS/MS 1 1361500 1361500 0 1070 2108 1186 2717 2529 2529 0 DVNAAIATIK YRGDVVPKDVNAAIAT NAAIATIKTKRSIQFV K D V I K T 3 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 10 0 1014.571 P68363;F5H5D3;Q9BQE3;Q71U36;Q6PEY2;Q13748 P68363 327 336 TUBA1B;TUBA1C;TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2 0.0033928 93.111 By MS/MS By MS/MS 1 1 24170000 13804000 10366000 1071 1810 1187 2718;2719 2530;2531 2530 2 DVNQQEFVR ________________ VNQQEFVRALAAFLKK K D V V R A 0 1 1 1 0 2 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 9 0 1133.5465 M0R2L9;M0QXK4;M0QYF7;M0R140;P39019 M0R2L9 7 15 RPS19 40S ribosomal protein S19 yes no 2 0.0078539 105.14 By MS/MS By MS/MS 1 1 8038300 4249600 3788700 1072 1296 1188 2720;2721 2532;2533 2532 2 DVPDGPLLREETYDVPPAFAK DVPPSVSKDVPDGPLL DVPPAFAKAKPFDPAR K D V A K A 2 1 0 3 0 0 2 1 0 0 2 1 0 1 4 0 1 0 1 2 0 0 21 1 2328.1638 P56945;H3BN62 P56945 315 335 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 3 0.023493 43.81 By matching By MS/MS 1 1 11176000 5129500 6046500 1073 1779 1189 2722;2723 2534 2534 1 DVPPDILLDSPERK SLPCSSPRDVPPDILL LLDSPERKQKKQKKMK R D V R K Q 0 1 0 3 0 0 1 0 0 1 2 1 0 0 3 1 0 0 0 1 0 0 14 1 1592.841 Q6KC79 Q6KC79 309 322 NIPBL Nipped-B-like protein yes yes 3 0.0051813 57.525 By MS/MS By MS/MS 3 3 17448000 9210900 8236800 1074 2147 1190 2724;2725;2726;2727;2728;2729 2535;2536;2537;2538;2539 2537 4267 5 DVQEIFR LEQLDMRRDVQEIFRM RDVQEIFRMTPHEKQV R D V F R M 0 1 0 1 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 7 0 905.46068 F6S4E6;A0A0A0MT12;F6TRA5;K7EQN7;F6WLT2;Q5STU3;O00148;Q13838;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;A0A140T996;F6UJC5;A0A140TA18;A0A140T9X3;A0A0G2JJZ9 F6S4E6 210 216 DDX39B;DDX39A ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.022479 97.071 By matching By MS/MS 1 1 2906800 1352200 1554600 1075 232 1191 2730;2731 2540 2540 1 DVQSPGFLNEPLSSK SATCKNIKDVQSPGFL LNEPLSSKSQRRKSLK K D V S K S 0 0 1 1 0 1 1 1 0 0 2 1 0 1 2 3 0 0 0 1 0 0 15 0 1616.8046 E9PPJ1;Q8NG31;H0YCZ2 E9PPJ1 1047 1061 CASC5 Protein CASC5 yes no 2 0.0015269 79.346 By MS/MS By MS/MS 1 1 33688000 14618000 19070000 1076 835 1192 2732;2733 2541;2542 2541 1509 2 DVSEYFYEK EGPKDREKDVSEYFYE VSEYFYEKSLPSVNDI K D V E K S 0 0 0 1 0 0 2 0 0 0 0 1 0 1 0 1 0 0 2 1 0 0 9 0 1178.5132 Q5VT06;H0Y7F7;Q5T2X4 Q5VT06 2607 2615 CEP350 Centrosome-associated protein 350 yes no 2 0.0026607 87.308 By MS/MS 1 1674500 1674500 0 1077 2114 1193 2734 2543 2543 7747 1 DVSGSWER GSTFRGRRDVSGSWER DVSGSWERDQQVEAAQ R D V E R D 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 2 0 1 0 1 0 0 8 0 934.41446 Q86VR2;K7ENZ6;K7EMF4;K7ELM8;K7EJ34;K7ENF4 Q86VR2 24 31 FAM134C Protein FAM134C yes no 2 0.011579 85.355 By MS/MS By matching 1 1 3845900 1982500 1863300 1078 2245 1194 2735;2736 2544 2544 4490 1 DVSLGTYGSR QDWEFQKRDVSLGTYG SLGTYGSRAAEPQEQE R D V S R A 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 2 1 0 1 1 0 0 10 0 1053.5091 Q9C0C2 Q9C0C2 934 943 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0014135 88.177 By MS/MS By MS/MS 1 1 8235000 3903400 4331600 1079 2615 1195 2737;2738 2545;2546 2545 5295;7882 2 DVSPFDHSR NKNRNRYRDVSPFDHS VSPFDHSRIKLHQEDN R D V S R I 0 1 0 2 0 0 0 0 1 0 0 0 0 1 1 2 0 0 0 1 0 0 9 0 1058.4781 P18031 P18031 48 56 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 0.0041516 99.343 By matching By MS/MS 1 1 28891000 14496000 14395000 1080 1598 1196 2739;2740 2547 2547 2935 1 DVTIGGSAPIYVK LGFSITSRDVTIGGSA GSAPIYVKNILPRGAA R D V V K N 1 0 0 1 0 0 0 2 0 2 0 1 0 0 1 1 1 0 1 2 0 0 13 0 1318.7133 Q5VWV2;Q8TEW0;Q5VWU8;F5GZI3 Q5VWV2 435 447 PARD3 Partitioning defective 3 homolog yes no 2 9.7903E-11 140.07 By MS/MS By MS/MS 1 1 4388400 2718700 1669700 1081 2121 1197 2741;2742 2548;2549 2549 7748 2 DVTNFTVGGFAPMSPR LAGGSKPRDVTNFTVG GFAPMSPRISSPMHPS R D V P R I 1 1 1 1 0 0 0 2 0 0 0 0 1 2 2 1 2 0 0 2 0 0 16 0 1694.8086 O00267 O00267 653 668 SUPT5H Transcription elongation factor SPT5 yes yes 2;3 0.0001341 102.58 By MS/MS By MS/MS 3 4 223670000 81608000 142060000 1082 1328 1198;1199 2743;2744;2745;2746;2747;2748;2749 2550;2551;2552;2553;2554;2555;2556 2552 151 2395 7 DVTPPPETEVVLIK ETEMALGKDVTPPPET ETEVVLIKNVCLPPEM K D V I K N 0 0 0 1 0 0 2 0 0 1 1 1 0 0 3 0 2 0 0 3 0 0 14 0 1535.8447 E7EVA0;P27816 E7EVA0 536 549 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.014575 74.649 By MS/MS By MS/MS 1 1 21005000 9138300 11866000 1083 742 1200 2750;2751 2557;2558 2558 2 DVVICPDASLEDAKK KDPVQCSRDVVICPDA ASLEDAKKEGPYDVVV R D V K K E 2 0 0 3 1 0 1 0 0 1 1 2 0 0 1 1 0 0 0 2 0 0 15 1 1658.8185 K7EN27;K7ELW0;Q99497 K7EN27 10 24 PARK7 Protein deglycase DJ-1 yes no 3 0.0056962 54.276 By MS/MS 1 604110 604110 0 1084 1280 1201 2752 2559 2559 1 DVVLSIVNDLTIAESNCPR QDTFGRMRDVVLSIVN IAESNCPRGARVAVVT R D V P R G 1 1 2 2 1 0 1 0 0 2 2 0 0 0 1 2 1 0 0 3 0 0 19 0 2114.0678 E7ENL6;P12111 E7ENL6 1815 1833 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 4.304E-09 113.35 By MS/MS By MS/MS 2 2 6969600 3071000 3898600 1085 710 1202 2753;2754;2755;2756 2560;2561;2562 2562 3 DVVLSTSPK RQGSWDSRDVVLSTSP VVLSTSPKLLATATAN R D V P K L 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 2 1 0 0 2 0 0 9 0 944.51786 A0A075B784;Q9P275 A0A075B784 576 584 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.0044809 101.93 By MS/MS By MS/MS 1 1 7532100 4286700 3245400 1086 13 1203 2757;2758 2563;2564 2564 29 2 DVWMPVTSASAKTTCKVSK IEKKEVGKDVWMPVTS KTTCKVSKLLEGKDYI K D V S K L 2 0 0 1 1 0 0 0 0 0 0 3 1 0 1 3 3 1 0 3 0 0 19 2 2095.0442 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42 A0A0A0MRA3 10652 10670 TTN Titin yes no 2 0.015387 54.023 By MS/MS 1 0 0 0 1087 173 1204 2759 2565 2565 308 1 DVYLSPR REPLPSRRDVYLSPRD RDVYLSPRDDGYSTKD R D V P R D 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 7 0 848.43922 P38159;H0Y6E7;H3BT71;H3BUY5;Q96E39 P38159 204 210 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 2 0.031278 72.325 By matching By MS/MS 1 1 186400000 90370000 96026000 1088 1678 1205 2760;2761 2566 2566 3089 1 DVYLSPRDDGYSTK REPLPSRRDVYLSPRD RDDGYSTKDSYSSRDY R D V T K D 0 1 0 3 0 0 0 1 0 0 1 1 0 0 1 2 1 0 2 1 0 0 14 1 1614.7526 P38159;H0Y6E7;H3BT71;H3BUY5;Q96E39 P38159 204 217 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 2 0.0010631 97.2 By MS/MS By MS/MS 1 1 139640000 74951000 64689000 1089 1678 1206 2762;2763 2567;2568;2569 2567 3089 3 DVYLSPRDDGYSTKDSYSSR REPLPSRRDVYLSPRD TKDSYSSRDYPSSRDT R D V S R D 0 2 0 4 0 0 0 1 0 0 1 1 0 0 1 5 1 0 3 1 0 0 20 2 2310.04 P38159;H0Y6E7;H3BT71;H3BUY5;Q96E39 P38159 204 223 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 3 2.2322E-05 81.553 By matching By MS/MS 1 1 101890000 55484000 46404000 1090 1678 1207 2764;2765 2570 2570 3089 1 DWQKYETARR SSRIKGEKDWQKYETA QKYETARRLKKCVDKI K D W R R L 1 2 0 1 0 1 1 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 10 2 1351.6633 P11387 P11387 440 449 TOP1 DNA topoisomerase 1 yes yes 2 0.023093 52.278 By MS/MS By matching 1 1 3789600 1777300 2012400 1091 1564 1208 2766;2767 2571 2571 7562 0 DYDDMSPR RPMPPSRRDYDDMSPR DYDDMSPRRGPPPPPP R D Y P R R 0 1 0 3 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 8 0 997.38111 P61978;Q5T6W2 P61978 279 286 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 1;2 0.0051266 145.99 By MS/MS By MS/MS 6 5 1118800000 645970000 472780000 1092 1788 1209;1210;1211 2768;2769;2770;2771;2772;2773;2774;2775;2776;2777;2778 2572;2573;2574;2575;2576;2577;2578;2579;2580;2581;2582;2583;2584;2585;2586 2581 228 3363 15 DYDEEEQGYDSEKEK KDVKQVTRDYDEEEQG GYDSEKEKKEEKKPIE R D Y E K K 0 0 0 3 0 1 5 1 0 0 0 2 0 0 0 1 0 0 2 0 0 0 15 1 1862.733 Q5T757;Q05519 Q5T757 364 378 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2;3 0.0026904 82.489 By MS/MS By MS/MS 2 2 39898000 20119000 19779000 1093 1853 1212 2779;2780;2781;2782 2587;2588;2589 2589 3483 1 DYDEEEQGYDSEKEKK KDVKQVTRDYDEEEQG YDSEKEKKEEKKPIET R D Y K K E 0 0 0 3 0 1 5 1 0 0 0 3 0 0 0 1 0 0 2 0 0 0 16 2 1990.828 Q5T757;Q05519 Q5T757 364 379 SRSF11 Serine/arginine-rich splicing factor 11 yes no 3 0.026055 48.51 By MS/MS By MS/MS 1 1 37435000 15885000 21551000 1094 1853 1213 2783;2784 2590;2591 2590 3483 2 DYEIESQNPLASPTNTLLGSAK GALVFLSKDYEIESQN NTLLGSAKEQRYQRGL K D Y A K E 2 0 2 1 0 1 2 1 0 1 3 1 0 0 2 3 2 0 1 0 0 0 22 0 2347.1543 Q7Z417 Q7Z417 618 639 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2;3 1.1923E-08 90.367 By MS/MS By MS/MS 2 2 104850000 57649000 47201000 1095 2214 1214 2785;2786;2787;2788 2592;2593;2594;2595 2592 4413;6934 4 DYEPPSPSPAPGAPPPPPQR LCRPPLPRDYEPPSPS APPPPPQRNASYLKTQ R D Y Q R N 2 1 0 1 0 1 1 1 0 0 0 0 0 0 10 2 0 0 1 0 0 0 20 0 2052.9905 A8MQ02;J3KN01;P55196;H0Y8L4 A8MQ02 1648 1667 MLLT4 Afadin yes no 3 2.0359E-05 78.166 By MS/MS By MS/MS 2 2 28250000 16867000 11383000 1096 431 1215 2789;2790;2791;2792 2596;2597;2598;2599;2600 2598 814;815;7266 5 DYFEQYGK DTEEHHLRDYFEQYGK DYFEQYGKIEVIEIMT R D Y G K I 0 0 0 1 0 1 1 1 0 0 0 1 0 1 0 0 0 0 2 0 0 0 8 0 1048.4502 F8W6I7;P09651;F8VTQ5;F8VYN5;F8VZ49;Q32P51 F8W6I7 123 130 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 0.0094436 110.34 By MS/MS By MS/MS 1 1 1640800 0 1640800 1097 933 1216 2793;2794 2601;2602 2602 2 DYNPYNYSDSISPFNK THSSPRSRDYNPYNYS DSISPFNKSALKEAMF R D Y N K S 0 0 3 2 0 0 0 0 0 1 0 1 0 1 2 3 0 0 3 0 0 0 16 0 1922.8323 E3W994;J3KR49;O75122;E7ERI8;E7EW49;A0A0U1RQI6;H7C4X8;H7C5M8 E3W994 997 1012 CLASP2 CLIP-associating protein 2 yes no 2 0.0010784 78.069 By MS/MS By MS/MS 2 2 51394000 28382000 23012000 1098 690 1217 2795;2796;2797;2798 2603;2604;2605;2606 2605 1219;1220;7350 4 DYQYSDQGIDY EYQDDYPRDYQYSDQG YSDQGIDY________ R D Y D Y - 0 0 0 3 0 2 0 1 0 1 0 0 0 0 0 1 0 0 3 0 0 0 11 0 1365.5361 Q15417 Q15417 319 329 CNN3 Calponin-3 yes yes 2 0.00069523 100.25 By MS/MS By MS/MS 2 2 24289000 14303000 9985800 1099 1989 1218 2799;2800;2801;2802 2607;2608;2609 2607 7714;7715 2 DYSPSRNPPEVEAR GLGPGEARDYSPSRNP NPPEVEAR________ R D Y A R - 1 2 1 1 0 0 2 0 0 0 0 0 0 0 3 2 0 0 1 1 0 0 14 1 1615.759 Q9HCM7 Q9HCM7 1032 1045 FBRSL1 Fibrosin-1-like protein yes yes 2;3 0.014462 56.793 By MS/MS By MS/MS 1 3 23705000 7990900 15714000 1100 2696 1219 2803;2804;2805;2806 2610;2611;2612;2613 2611 5503 4 DYTGCSTSESLSPVK YRRKNSKRDYTGCSTS SESLSPVKQAPRKSPS R D Y V K Q 0 0 0 1 1 0 1 1 0 0 1 1 0 0 1 4 2 0 1 1 0 0 15 0 1629.7192 O95297 O95297 199 213 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.00034109 97.235 By MS/MS By MS/MS 2 2 29428000 15767000 13661000 1101 1485 1220 2807;2808;2809;2810 2614;2615;2616;2617 2616 2749;2750;7541 4 DYYRQYNR DYEYNRYRDYYRQYNR DYYRQYNRDGPSIFHI R D Y N R D 0 2 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 8 1 1176.5312 H3BQZ7;Q1KMD3 H3BQZ7 713 720 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 2 0.01673 46.426 By MS/MS 1 0 0 0 1102 1132 1221 2811 2618 2618 7463;7464 1 EAAAGIQWSEEETEDEEEEKEVTPESGPPK AARKQKAREAAAGIQW TPESGPPKVEEADGGL R E A P K V 3 0 0 1 0 1 11 2 0 1 0 2 0 0 3 2 2 1 0 1 0 0 30 1 3329.4583 P46087;F5H5X6;F5GYR3 P46087 173 202 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 3 0.00092372 55.049 By MS/MS By matching 1 1 18933000 10943000 7990400 1103 1707 1222 2812;2813 2619 2619 3154 1 EAAENSLVAYK FATGNDRKEAAENSLV ENSLVAYKAASDIAMT K E A Y K A 3 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 11 0 1193.5928 P62258;K7EM20 P62258 143 153 YWHAE 14-3-3 protein epsilon yes no 2 0.00069445 133.99 By MS/MS By MS/MS 1 1 8818100 4727900 4090200 1104 1793 1223 2814;2815 2620;2621 2620 2 EAAEPLSEPKEDQEAAELLSEPEEESER HIFQLFWREAAEPLSE EPEEESERHILELEEV R E A E R H 4 1 0 1 0 1 11 0 0 0 3 1 0 0 3 3 0 0 0 0 0 0 28 1 3140.4157 A0A0A0MTR7;A0A0A0MTC1;Q63HN8 A0A0A0MTR7 1239 1266 RNF213 E3 ubiquitin-protein ligase RNF213 yes no 3 1.2985E-06 75.534 By MS/MS By MS/MS 1 1 23779000 12518000 11260000 1105 241 1224 2816;2817 2622;2623 2623 438 2 EAAFSPGQQDWSR SLSVGPQREAAFSPGQ PGQQDWSRDFCIEASE R E A S R D 2 1 0 1 0 2 1 1 0 0 0 0 0 1 1 2 0 1 0 0 0 0 13 0 1477.6586 Q9C0C2 Q9C0C2 1099 1111 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0055083 71.529 By MS/MS By MS/MS 1 1 7049000 3522700 3526300 1106 2615 1225 2818;2819 2624;2625 2625 5296 2 EAAGKSSGPTSLFAVTVAPPGAR QQQRGAAKEAAGKSSG TVAPPGARQGQQQAGG K E A A R Q 5 1 0 0 0 0 1 3 0 0 1 1 0 1 3 3 2 0 0 2 0 0 23 1 2170.1382 Q00839 Q00839 182 204 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3 0.029147 50.776 By MS/MS 1 2183200 2183200 0 1107 1827 1226 2820 2626 2626 1 EAAGPAPSPMR ARWQRKAKEAAGPAPS GPAPSPMRAANRSHSA K E A M R A 3 1 0 0 0 0 1 1 0 0 0 0 1 0 3 1 0 0 0 0 0 0 11 0 1082.5179 Q12834 Q12834 34 44 CDC20 Cell division cycle protein 20 homolog yes yes 2 0.0018158 93.766 By MS/MS By MS/MS 1 1 11251000 6569200 4681600 1108 1878 1227 2821;2822 2627;2628;2629 2627 3566 3 EAALILGVSPTANK FEPKMTKREAALILGV GVSPTANKGKIRDAHR R E A N K G 3 0 1 0 0 0 1 1 0 1 2 1 0 0 1 1 1 0 0 1 0 0 14 0 1382.7769 Q96DA6 Q96DA6 62 75 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes yes 2 0.0024339 79.346 By MS/MS 1 2228800 2228800 0 1109 2471 1228 2823 2630 2630 4976 1 EAALPPVSPLK RGRDAVKREAALPPVS LPPVSPLKAALSEEEL R E A L K A 2 0 0 0 0 0 1 0 0 0 2 1 0 0 3 1 0 0 0 1 0 0 11 0 1120.6492 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1061 1071 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 5.4996E-30 184.98 By MS/MS By MS/MS 1 1 107800000 66198000 41605000 1110 740 1229 2824;2825 2631;2632;2633;2634;2635;2636;2637;2638;2639;2640;2641;2642;2643 2640 1334 13 EAALPPVSPLKAALSEEELEK RGRDAVKREAALPPVS LSEEELEKKSKAIIEE R E A E K K 4 0 0 0 0 0 5 0 0 0 4 2 0 0 3 2 0 0 0 1 0 0 21 1 2220.1889 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1061 1081 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 0.001264 63.447 By matching By MS/MS 1 1 9970500 5734000 4236500 1111 740 1230 2826;2827 2644 2644 1334 1 EAALPPVSPLKAALSEEELEKK RGRDAVKREAALPPVS SEEELEKKSKAIIEEY R E A K K S 4 0 0 0 0 0 5 0 0 0 4 3 0 0 3 2 0 0 0 1 0 0 22 2 2348.2839 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1061 1082 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3;4 2.4033E-09 94.632 By MS/MS By MS/MS 2 2 67318000 35585000 31733000 1112 740 1231 2828;2829;2830;2831 2645;2646;2647;2648;2649;2650;2651 2646 1334 7 EAANEAGDSSQDEAEDDVK ADAKHREREAANEAGD DEAEDDVKQITVRFSR R E A V K Q 4 0 1 4 0 1 4 1 0 0 0 1 0 0 0 2 0 0 0 1 0 0 19 0 1978.7876 A0A0C4DH01;Q9NVU0 A0A0C4DH01 117 135 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes no 2 3.9953E-06 92.264 By matching By MS/MS 1 1 10255000 4962300 5292700 1113 303 1232 2832;2833 2652 2652 547;548 1 EAANEAGDSSQDEAEDDVKQITVR ADAKHREREAANEAGD DVKQITVRFSRPESEQ R E A V R F 4 1 1 4 0 2 4 1 0 1 0 1 0 0 0 2 1 0 0 2 0 0 24 1 2576.1474 A0A0C4DH01;Q9NVU0 A0A0C4DH01 117 140 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes no 3 1.798E-06 82.362 By MS/MS By matching 1 1 17166000 10118000 7048700 1114 303 1233 2834;2835 2653 2653 547;548 1 EAARSPDKPGGSPSASR QAETREAREAARSPDK GGSPSASRRKGRASEH R E A S R R 3 2 0 1 0 0 1 2 0 0 0 1 0 0 3 4 0 0 0 0 0 0 17 2 1668.818 Q9Y3T9 Q9Y3T9 45 61 NOC2L Nucleolar complex protein 2 homolog yes yes 3 0.00091722 73.593 By MS/MS By MS/MS 2 2 229380000 137480000 91895000 1115 2912 1234;1235 2836;2837;2838;2839 2654;2655;2656;2657 2654 6056;6057;6058 4 EAASSPAGEPLR PSAAGADREAASSPAG SPAGEPLRKRPRRDGP R E A L R K 3 1 0 0 0 0 2 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 12 0 1183.5833 Q96EB6 Q96EB6 23 34 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 2 0.00095645 103.14 By MS/MS By matching 1 1 7951100 4455800 3495300 1116 2477 1236 2840;2841 2658;2659 2659 4996 2 EAASSSSGTQPAPPAPASPWDSK RKRSGEAKEAASSSSG PASPWDSKKHRSRDRK K E A S K K 5 0 0 1 0 1 1 1 0 0 0 1 0 0 5 6 1 1 0 0 0 0 23 0 2225.0237 Q9H7N4 Q9H7N4 531 553 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.026294 45.885 By MS/MS By matching 1 1 13170000 7536900 5633000 1117 2675 1237 2842;2843 2660 2660 5453 1 EAASSSSGTQPAPPAPASPWDSKK RKRSGEAKEAASSSSG ASPWDSKKHRSRDRKP K E A K K H 5 0 0 1 0 1 1 1 0 0 0 2 0 0 5 6 1 1 0 0 0 0 24 1 2353.1186 Q9H7N4 Q9H7N4 531 554 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 3 1.0162E-15 104.18 By MS/MS By MS/MS 1 1 19460000 9835200 9625200 1118 2675 1238 2844;2845 2661;2662 2661 5453 2 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR RSCTSDTKEAATQEDP AEEEILLREFEERRSL K E A L R E 4 2 0 1 0 2 12 2 1 1 4 0 0 0 3 2 1 0 0 2 0 0 37 1 4114.9455 Q9BVJ6;X6RJY0 Q9BVJ6 386 422 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 4 0.0022832 46.15 By MS/MS By matching 2 2 96686000 70697000 25989000 1119 2586 1239;1240 2846;2847;2848;2849 2663;2664 2664 5227;5228 2 EAAVSASDILQESAIHSPGTVEK DEEWRRCREAAVSASD HSPGTVEKEAKKKRKL R E A E K E 4 0 0 1 0 1 3 1 1 2 1 1 0 0 1 4 1 0 0 2 0 0 23 0 2338.1652 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 118 140 C12orf43 Uncharacterized protein C12orf43 yes no 3 0.00037063 65.374 By MS/MS By MS/MS 1 1 29787000 16495000 13292000 1120 709 1241 2850;2851 2665;2666 2665 1258 2 EACGVIVELIK LVGQENAREACGVIVE GVIVELIKSKKMAGRA R E A I K S 1 0 0 0 1 0 2 1 0 2 1 1 0 0 0 0 0 0 0 2 0 0 11 0 1229.669 Q9Y265 Q9Y265 47 57 RUVBL1 RuvB-like 1 yes yes 2 0.0076598 78.556 By MS/MS 1 835050 835050 0 1121 2885 1242 2852 2667 2667 1 EADDDEEVDDNIPEMPSPK RCPNMAMKEADDDEEV IPEMPSPKKMHQGKKK K E A P K K 1 0 1 5 0 0 4 0 0 1 0 1 1 0 3 1 0 0 0 1 0 0 19 0 2143.8739 P26358 P26358 698 716 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2;3 9.0313E-158 234.12 By MS/MS By MS/MS 2 2 108620000 51173000 57444000 1122 1634 1243 2853;2854;2855;2856 2668;2669;2670;2671;2672 2672 3021 5 EADDIVNWLK PKEYTAGREADDIVNW DDIVNWLKKRTGPAAT R E A L K K 1 0 1 2 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1201.5979 I3L3P5;I3L312;P07237 I3L3P5 85 94 P4HB Protein disulfide-isomerase yes no 2 0.00053163 126.41 By MS/MS By MS/MS 1 1 1863600 1148500 715150 1123 1209 1244 2857;2858 2673;2674 2673 2 EADSSSDYVNMDFTK QKPTHEQREADSSSDY YVNMDFTKRESNTPAP R E A T K R 1 0 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 15 0 1707.6934 O14654 O14654 914 928 IRS4 Insulin receptor substrate 4 yes yes 2 7.6351E-25 155.47 By MS/MS By MS/MS 2 2 85960000 44381000 41579000 1124 1343 1245;1246 2859;2860;2861;2862 2675;2676;2677;2678 2677 155 2437;2438;2439;7502 4 EADSSSDYVNMDFTKR QKPTHEQREADSSSDY VNMDFTKRESNTPAPS R E A K R E 1 1 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 16 1 1863.7945 O14654 O14654 914 929 IRS4 Insulin receptor substrate 4 yes yes 2;3 1.8359E-36 169.04 By MS/MS By MS/MS 6 6 640090000 311840000 328250000 1125 1343 1247;1248;1249 2863;2864;2865;2866;2867;2868;2869;2870;2871;2872;2873;2874 2679;2680;2681;2682;2683;2684;2685;2686;2687 2683 155 2437;2438;2439;7502 9 EAEALLQSMGLTPESPIVPPPMSPSSK SDLEKKRREAEALLQS PPMSPSSKSVSTPSEA R E A S K S 2 0 0 0 0 1 3 1 0 1 3 1 2 0 6 5 1 0 0 1 0 0 27 0 2792.3976 E9PGG1;E7ETL8;E7EQU2;E7EV09;E7EQL5 E9PGG1 59 85 DYNC1I2 yes no 2;3;4 3.8413E-27 115.38 By MS/MS By MS/MS 6 5 326810000 229070000 97733000 1126 721 1250;1251;1252 2875;2876;2877;2878;2879;2880;2881;2882;2883;2884;2885 2688;2689;2690;2691;2692;2693;2694;2695;2696;2697;2698 2698 84;85 1281;1282;1283 11 EAEEGPTGASESQDSPR PAPPSKPKEAEEGPTG SESQDSPRKLKYEEPE K E A P R K 2 1 0 1 0 1 4 2 0 0 0 0 0 0 2 3 1 0 0 0 0 0 17 0 1745.734 H0Y507;Q5TCZ1 H0Y507 460 476 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.0045352 73.597 By MS/MS By MS/MS 2 2 5214200 2890700 2323500 1127 1022 1253 2886;2887;2888;2889 2699;2700;2701 2699 1897;1898 3 EAENQGLDISSPGMSGHR IIAEDETKEAENQGLD SPGMSGHRQGHDSLEH K E A H R Q 1 1 1 1 0 1 2 3 1 1 1 0 1 0 1 3 0 0 0 0 0 0 18 0 1883.8432 Q15545 Q15545 191 208 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 3 0.0080824 52.095 By MS/MS By matching 1 1 5122500 2492700 2629800 1128 1994 1254 2890;2891 2702 2702 3891;3892 1 EAESELTVTQLKELRK EEGPEEDREAESELTV TQLKELRKQQQILLEK R E A R K Q 1 1 0 0 0 1 4 0 0 0 3 2 0 0 0 1 2 0 0 1 0 0 16 2 1873.0157 A0A087WWF4;A0A087X0M4;Q9BWU0;H7C256 A0A087WWF4 52 67 SLC4A1AP Kanadaptin yes no 2 0.02609 46.408 By MS/MS By MS/MS 1 2 8771000 5002700 3768300 1129 76 1255 2892;2893;2894 2703;2704 2704 2 EAEYSDKHGQYLIGHGTK LRKQSNGREAEYSDKH YLIGHGTKVYIDPFTY R E A T K V 1 0 0 1 0 1 2 3 2 1 1 2 0 0 0 1 1 0 2 0 0 0 18 1 2031.965 Q96L35;P54760 Q96L35 571 588 EPHB4 Receptor protein-tyrosine kinase;Ephrin type-B receptor 4 yes no 3 0.01833 52.019 By MS/MS 1 0 0 0 1130 1768 1256 2895 2705 2705 7642;7643 1 EAFEQPQTSSTPPRDLDSK NPGLKIPKEAFEQPQT PPRDLDSKACISIGNQ K E A S K A 1 1 0 2 0 2 2 0 0 0 1 1 0 1 3 3 2 0 0 0 0 0 19 1 2132.0022 A0A0A0MRF7;K7EIW3;P52564 A0A0A0MRF7 18 36 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes no 3 0.0032692 58.635 By MS/MS By matching 1 1 11740000 10747000 993650 1131 182 1257 2896;2897 2706 2706 324;6267 1 EAGSPAQEFK NSSEEEAREAGSPAQE GSPAQEFKYQKSLPPR R E A F K Y 2 0 0 0 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 10 0 1062.4982 Q5JSZ5;Q5JT00 Q5JSZ5 610 619 PRRC2B Protein PRRC2B yes no 2 2.1538E-05 126.71 By MS/MS By MS/MS 1 1 11065000 6104500 4960300 1132 2074 1258 2898;2899 2707;2708 2707 4078 2 EAGVEMGDEDDLSTPNEK CEALAMLREAGVEMGD DLSTPNEKLLGHLVKE R E A E K L 1 0 1 3 0 0 4 2 0 0 1 1 1 0 1 1 1 0 0 1 0 0 18 0 1934.8051 H7BZ35;P14868 H7BZ35 71 88 DARS Aspartate--tRNA ligase, cytoplasmic yes no 2 0.003791 69.352 By matching By MS/MS 1 1 6893800 3523800 3370000 1133 1156 1259 2900;2901 2709 2709 1 EAIIPGSVYDR TTAMYDAREAIIPGSV IPGSVYDRSSQGRPSS R E A D R S 1 1 0 1 0 0 1 1 0 2 0 0 0 0 1 1 0 0 1 1 0 0 11 0 1218.6245 Q92900 Q92900 950 960 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.00012198 115 By MS/MS By MS/MS 1 1 9218000 4608900 4609100 1134 2445 1260 2902;2903 2710;2711 2710 4923;7830 2 EALAEAALESPRPALVR HPEQENSREALAEAAL SPRPALVRSASSDTSE R E A V R S 5 2 0 0 0 0 3 0 0 0 3 0 0 0 2 1 0 0 0 1 0 0 17 1 1791.9843 J3QRP6;O14745 J3QRP6 152 168 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 3 0.0025714 63.212 By MS/MS By MS/MS 1 1 47161000 29439000 17722000 1135 1256 1261 2904;2905 2712;2713 2712 2273 2 EALGLGPPAAQLTPPPAPVGLR LGPAGGDREALGLGPP PPAPVGLRGSGLRGLQ R E A L R G 4 1 0 0 0 1 1 3 0 0 4 0 0 0 6 0 1 0 0 1 0 0 22 0 2121.1946 A0A087WZ13;E9PAU2;Q8IY67 A0A087WZ13 451 472 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 2;3 7.1033E-35 139.75 By MS/MS By MS/MS 2 2 152620000 92800000 59817000 1136 104 1262 2906;2907;2908;2909 2714;2715;2716;2717;2718;2719 2718 6243 6 EALPMDTEVYESPYADPEEIRPK AADKGPQREALPMDTE DPEEIRPKEVYLDRKL R E A P K E 2 1 0 2 0 0 5 0 0 1 1 1 1 0 4 1 1 0 2 1 0 0 23 1 2678.2422 P43405 P43405 339 361 SYK Tyrosine-protein kinase SYK yes yes 3 2.993E-05 75.358 By MS/MS By MS/MS 3 3 40493000 23607000 16886000 1137 1701 1263;1264;1265 2910;2911;2912;2913;2914;2915 2720;2721;2722;2723 2723 212 3132;6701;7604;7605 4 EALQDVEDENQ GDGEEQNKEALQDVED QDVEDENQ________ K E A N Q - 1 0 1 2 0 2 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1288.5419 P62258;I3L0W5 P62258 245 255 YWHAE 14-3-3 protein epsilon yes no 2 1.2344E-05 140.78 By MS/MS By MS/MS 1 1 33576000 15700000 17876000 1138 1793 1266 2916;2917 2724;2725 2724 2 EALSPCPSTVSTK DIRTGNTREALSPCPS CPSTVSTKSQPGSSAS R E A T K S 1 0 0 0 1 0 1 0 0 0 1 1 0 0 2 3 2 0 0 1 0 0 13 0 1375.6653 Q08AD1 Q08AD1 670 682 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 0.00131 99.991 By MS/MS By MS/MS 1 1 13649000 7815400 5833600 1139 1868 1267 2918;2919 2726;2727 2727 3515 2 EANANGSSPEPVKAVEAR TKQKQDSKEANANGSS PVKAVEARSPGLQKEA K E A A R S 4 1 2 0 0 0 3 1 0 0 0 1 0 0 2 2 0 0 0 2 0 0 18 1 1824.8966 Q3KQU3 Q3KQU3 735 752 MAP7D1 MAP7 domain-containing protein 1 yes yes 3 8.979E-05 80.387 By MS/MS By MS/MS 1 1 7092100 3591400 3500700 1140 2036 1268 2920;2921 2728;2729 2728 3981;3982 2 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK AGASPVEKEAPAEGEA ASSTSSPKAEDGATPS K E A P K A 10 0 0 0 0 0 6 3 0 0 0 1 0 0 4 6 2 0 0 0 0 0 32 0 2914.2952 P29966 P29966 106 137 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 5.2377E-44 123.22 By MS/MS By MS/MS 2 3 225340000 136760000 88577000 1141 1648 1269 2922;2923;2924;2925;2926 2730;2731;2732;2733;2734;2735 2730 3044;6692 6 EAQQKVPDEEENEESDNEKETEK SDPVKAWKEAQQKVPD DNEKETEKSDSVTDSG K E A E K S 1 0 2 2 0 2 9 0 0 0 0 3 0 0 1 1 1 0 0 1 0 0 23 2 2733.1737 P11388 P11388 1092 1114 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.0012029 58.755 By matching By MS/MS 1 1 27212000 11488000 15723000 1142 1565 1270 2927;2928 2736 2736 2868 1 EAQTLDSQIQETSI LSGGGDQREAQTLDSQ SQIQETSI________ R E A S I - 1 0 0 1 0 3 2 0 0 2 1 0 0 0 0 2 2 0 0 0 0 0 14 0 1561.7471 E7EVA0;P27816 E7EVA0 2284 2297 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.0020076 81.789 By MS/MS 1 4865000 0 4865000 1143 742 1271 2929 2737 2737 1342 1 EAQVNVRMDSFDEDLARPSGLLAQER KSSFSITREAQVNVRM SGLLAQERKLCRDLVH R E A E R K 3 3 1 3 0 2 3 1 0 0 3 0 1 1 1 2 0 0 0 2 0 0 26 2 2945.4301 Q9Y2W1 Q9Y2W1 566 591 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 4 0.0099664 41.45 By MS/MS 1 3313300 3313300 0 1144 2897 1272 2930 2738 2738 6031 1 EARNSWDSPAFSNDVIR LSKQTYHKEARNSWDS AFSNDVIRKRHYRIGL K E A I R K 2 2 2 2 0 0 1 0 0 1 0 0 0 1 1 3 0 1 0 1 0 0 17 1 1962.9184 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 494 510 IQSEC1 IQ motif and SEC7 domain-containing protein 1 no no 3 4.8091E-05 84.166 By MS/MS By MS/MS 1 1 6913800 4091900 2821900 1145 78;299 1273 2931;2932 2739;2740 2739 135;136 2 EARYSDGSIALDIFGPQK TSTTPRKKEARYSDGS LDIFGPQKMDPIYHTR K E A Q K M 2 1 0 2 0 1 1 2 0 2 1 1 0 1 1 2 0 0 1 0 0 0 18 1 1965.9796 Q12923 Q12923 341 358 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 3 0.00013026 78.078 By MS/MS 1 1044800 1044800 0 1146 1885 1274 2933 2741 2741 3590 1 EASRPPEEPSAPSPTLPAQFK TPPAPSSREASRPPEE PTLPAQFKQRAPMYNS R E A F K Q 3 1 0 0 0 1 3 0 0 0 1 1 0 1 6 3 1 0 0 0 0 0 21 1 2235.1172 H0Y3X6;A0A0C4DFX9;Q9H3P2 H0Y3X6 355 375 NELFA Negative elongation factor A yes no 3 2.1514E-19 127.37 By MS/MS By MS/MS 1 1 82851000 45268000 37583000 1147 271 1275 2934;2935 2742;2743;2744 2743 489 3 EATAQKPTGSVGSTVTTPPPLVR LRQSQIQKEATAQKPT TTPPPLVRGTQNIPAG K E A V R G 2 1 0 0 0 1 1 2 0 0 1 1 0 0 4 2 5 0 0 3 0 0 23 1 2293.2278 Q86YP4 Q86YP4 173 195 GATAD2A Transcriptional repressor p66-alpha yes yes 3 3.2574E-26 128.4 By MS/MS By matching 1 1 56363000 33461000 22902000 1148 2256 1276 2936;2937 2745 2745 6947 1 EAVFPFQPGSVAEVCITFDQANLTVK GAWGTEQREAVFPFQP DQANLTVKLPDGYEFK R E A V K L 3 0 1 1 1 2 2 1 0 1 1 1 0 3 2 1 2 0 0 4 0 0 26 0 2866.4211 P09382 P09382 75 100 LGALS1 Galectin-1 yes yes 3 0.0018236 37.821 By matching By MS/MS 1 1 6861500 2651300 4210200 1149 1549 1277 2938;2939 2746 2746 1 EAVREGSPANWK PPYMIASKEAVREGSP EGSPANWKRKEKLPQV K E A W K R 2 1 1 0 0 0 2 1 0 0 0 1 0 0 1 1 0 1 0 1 0 0 12 1 1342.663 O96019 O96019 227 238 ACTL6A Actin-like protein 6A yes yes 2 0.0023446 92.781 By MS/MS 1 9947800 9947800 0 1150 1507 1278 2940 2747 2747 2795 1 EAVVDLHADDSRISEDETER SITTESLKEAVVDLHA ISEDETERNGDDGTHD K E A E R N 2 2 0 4 0 0 4 0 1 1 1 0 0 0 0 2 1 0 0 2 0 0 20 1 2285.0408 G3V3T3 G3V3T3 115 134 ACIN1 yes yes 3 0.013952 47 By MS/MS By MS/MS 1 1 9883400 4837600 5045800 1151 971 1279 2941;2942 2748;2749 2749 1770 2 ECELSPGVNR NLQNIRLRECELSPGV ELSPGVNRDLTRRVRN R E C N R D 0 1 1 0 1 0 2 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 10 0 1159.5292 Q9BXP5;H7C3A1 Q9BXP5 489 498 SRRT Serrate RNA effector molecule homolog yes no 2 0.001574 102.51 By MS/MS By MS/MS 1 1 4234500 2009400 2225200 1152 2599 1280 2943;2944 2750;2751 2751 5266 2 ECINAAPDSPSK QRSKDHSKECINAAPD AAPDSPSKQLPDQISF K E C S K Q 2 0 1 1 1 0 1 0 0 1 0 1 0 0 2 2 0 0 0 0 0 0 12 0 1287.5765 J3KNN7;Q7Z569 J3KNN7 79 90 BRAP BRCA1-associated protein yes no 2 0.0028352 85.976 By MS/MS By MS/MS 1 1 8563200 3629300 4933900 1153 1224 1281 2945;2946 2752;2753;2754;2755 2754 2216 4 ECLSLDPEER MHKKDTLKECLSLDPE LSLDPEERKKAESQIN K E C E R K 0 1 0 1 1 0 3 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 10 0 1246.55 Q8NI08 Q8NI08 438 447 NCOA7 Nuclear receptor coactivator 7 yes yes 2 0.031089 58.172 By MS/MS 1 2471500 0 2471500 1154 2364 1282 2947 2756 2756 1 ECSPTSSLER SASRPRGRECSPTSSL SPTSSLERLCRHKHQR R E C E R L 0 1 0 0 1 0 2 0 0 0 1 0 0 0 1 3 1 0 0 0 0 0 10 0 1164.5081 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 1122 1131 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 0.0027343 85.731 By MS/MS By MS/MS 1 1 11426000 6482100 4944100 1155 329 1283 2948;2949 2757;2758 2757 613 2 EDAEGVAAEEEQEGDSGEQETGATDARPR PDDMITQREDAEGVAA GATDARPRRRKPARLL R E D P R R 5 2 0 3 0 2 8 4 0 0 0 0 0 0 1 1 2 0 0 1 0 0 29 1 3032.2715 Q96KC8 Q96KC8 415 443 DNAJC1 DnaJ homolog subfamily C member 1 yes yes 3 0.00054294 57.673 By matching By MS/MS 1 1 17707000 8828200 8878700 1156 2512 1284 2950;2951 2759 2759 5074 1 EDALDDSVSSSSVHASPLASSPVRK EWDNYDLREDALDDSV LASSPVRKNLFRFGES R E D R K N 3 1 0 3 0 0 1 0 1 0 2 1 0 0 2 8 0 0 0 3 0 0 25 1 2540.2354 P49792;Q7Z3J3;J3KNE0;A6NKT7;J3KQ37;Q99666;O14715 P49792 2231 2255 RANBP2;RGPD4;RGPD3;RGPD8;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 no no 3 0.00035085 57.986 By MS/MS By matching 1 1 16904000 9614500 7289800 1157 1730;1345 1285 2952;2953 2760 2760 2449;2450;2451 1 EDDMFKDFAARSPSASITDEDSNV NNLTHMLKEDDMFKDF ITDEDSNV________ K E D N V - 3 1 1 5 0 0 2 0 0 1 0 1 1 2 1 4 1 0 0 1 0 0 24 2 2646.1392 Q86W92;H0YFE4 Q86W92 988 1011 PPFIBP1 Liprin-beta-1 yes no 3 0.017485 47.392 By MS/MS By matching 1 1 5421000 3379700 2041300 1158 2247 1286 2954;2955 2761 2761 4497;4498;4499 1 EDEISPPPPNPVVK AGTRTDSREDEISPPP PPPNPVVKGRRRRGAI R E D V K G 0 0 1 1 0 0 2 0 0 1 0 1 0 0 5 1 0 0 0 2 0 0 14 0 1516.7773 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644 K7EMU2 79 92 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 2 0.00097848 91.549 By MS/MS By MS/MS 1 1 7149200 3276600 3872600 1159 1263 1287 2956;2957 2762;2763;2764;2765 2763 2292 4 EDENQNIPEQPVEITKPK TSAEMEIREDENQNIP PVEITKPKRIRPSFKE R E D P K R 0 0 2 1 0 2 4 0 0 2 0 2 0 0 3 0 1 0 0 1 0 0 18 1 2107.0433 Q8NB66 Q8NB66 949 966 UNC13C Protein unc-13 homolog C yes yes 4 0.01229 41.088 By matching By MS/MS 1 1 16058000 4501600 11556000 1160 2331 1288 2958;2959 2766 2766 1 EDGNEEDKENQGDETQGQQPPQRR PPRQRQPREDGNEEDK GQQPPQRRYRRNFNYR R E D R R Y 0 2 2 3 0 5 5 3 0 0 0 1 0 0 2 0 1 0 0 0 0 0 24 2 2783.1979 H0Y449;P67809 H0Y449 307 330 YBX1 Nuclease-sensitive element-binding protein 1 yes no 4 0.027608 32.797 By matching By MS/MS 1 1 9033200 2770800 6262400 1161 1015 1289 2960;2961 2767 2767 1 EDNAVSAATALLESEEDTISAVKQKDTENTGR TKFNLICREDNAVSAA KDTENTGRSVEHLAST R E D G R S 5 1 2 3 0 1 5 1 0 1 2 2 0 0 0 3 4 0 0 2 0 0 32 2 3391.6227 Q9BXT5 Q9BXT5 545 576 TEX15 Testis-expressed sequence 15 protein yes yes 3 0.016587 44.05 By matching By MS/MS 1 1 13728000 7836300 5891300 1162 2601 1290 2962;2963 2768 2768 5268 1 EDPSSQHQEANNLDKNMTKAESAR VDLDENLKEDPSSQHQ MTKAESARLFRMWYSF K E D A R L 3 1 3 2 0 2 3 0 1 0 1 2 1 0 1 3 1 0 0 0 0 0 24 2 2699.2205 Q8IVB4 Q8IVB4 501 524 SLC9A9 Sodium/hydrogen exchanger 9 yes yes 3 0.017414 51.876 By MS/MS 1 0 0 0 1163 2263 1291 2964 2769 2769 4542;4543 1 EDQTEYLEER TKVILHLKEDQTEYLE QTEYLEERRVKEVVKK K E D E R R 0 1 0 1 0 1 4 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1310.5626 P07900;G3V2J8;Q58FF6;P08238;Q58FF7 P08238 187 196 HSP90AA1;HSP90AB4P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 2 3.22E-05 128.27 By matching By MS/MS 1 1 7497000 3161100 4335900 1164 1542;1540 1292 2965;2966 2770 2770 1 EDSGLFSPIR PRPVKASREDSGLFSP SGLFSPIRSSAFSPLG R E D I R S 0 1 0 1 0 0 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1119.556 Q9UKA4 Q9UKA4 442 451 AKAP11 A-kinase anchor protein 11 yes yes 2 2.4E-05 125.54 By MS/MS By MS/MS 1 1 24267000 12489000 11779000 1165 2827 1293 2967;2968 2771;2772 2771 5816 2 EDSGTFSLGK AEAPPLEREDSGTFSL SGTFSLGKMITAKPGK R E D G K M 0 0 0 1 0 0 1 2 0 0 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1039.4822 G5E9Q4;O75569 G5E9Q4 16 25 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 2 0.0016048 101.46 By MS/MS By MS/MS 1 1 9211900 5519600 3692400 1166 996 1294 2969;2970 2773;2774 2774 1824 2 EDSQPPTPVSQRSEEQKSK AEEEGEDKEDSQPPTP RSEEQKSKKGPDGLAL K E D S K K 0 1 0 1 0 3 3 0 0 0 0 2 0 0 3 4 1 0 0 1 0 0 19 2 2156.0346 J3KMZ8;Q92785 J3KMZ8 256 274 DPF2 Zinc finger protein ubi-d4 yes no 3 0.028862 41.202 By MS/MS 1 0 0 0 1167 1219 1295 2971 2775 2775 1 EDVEVAESPLR SPPLLCTREDVEVAES EVAESPLRVLAETPDS R E D L R V 1 1 0 1 0 0 3 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 11 0 1242.6092 J3KMX1;Q99567 J3KMX1 449 459 NUP88 Nuclear pore complex protein Nup88 yes no 2 2.402E-10 163.99 By MS/MS By MS/MS 1 1 39468000 20463000 19005000 1168 1218 1296 2972;2973 2776;2777 2776 2207 2 EDVEVVGGSDGEGAIGLSSDPK LETRKKQKEDVEVVGG IGLSSDPKSREQMIND K E D P K S 1 0 0 3 0 0 3 5 0 1 1 1 0 0 1 3 0 0 0 3 0 0 22 0 2115.9808 Q8NHZ8 Q8NHZ8 34 55 CDC26 Anaphase-promoting complex subunit CDC26 yes yes 2 0.0093645 52.045 By matching By MS/MS 1 1 5734700 3128600 2606100 1169 2363 1297 2974;2975 2778 2778 4738 1 EEADYSAFGTDTLIK LRIFIQKKEEADYSAF FGTDTLIKKKNVLTNV K E E I K K 2 0 0 2 0 0 2 1 0 1 1 1 0 1 0 1 2 0 1 0 0 0 15 0 1658.7675 Q9BYG5 Q9BYG5 97 111 PARD6B Partitioning defective 6 homolog beta yes yes 2 1.5607E-09 122.55 By MS/MS By MS/MS 1 1 7629100 3956200 3672900 1170 2605 1298 2976;2977 2779;2780 2779 5276;7877 2 EEAPASPLRPLYPQISPLK QFTSLYHKEEAPASPL YPQISPLKIHIPEPDL K E E L K I 2 1 0 0 0 1 2 0 0 1 3 1 0 0 5 2 0 0 1 0 0 0 19 1 2105.1521 P85037;U3KQ26 P85037 208 226 FOXK1 Forkhead box protein K1 yes no 3 0.0047098 59.261 By MS/MS By matching 1 1 3706300 1981500 1724700 1171 1818 1299 2978;2979 2781 2781 3393;3394 1 EEASDDDMEGDEAVVR EDVYGEVREEASDDDM EGDEAVVRCTLSANLV R E E V R C 2 1 0 4 0 0 4 1 0 0 0 0 1 0 0 1 0 0 0 2 0 0 16 0 1765.6949 O75643 O75643 222 237 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 6.2233E-36 169.98 By MS/MS By MS/MS 2 2 243150000 117410000 125740000 1172 1446 1300;1301 2980;2981;2982;2983 2782;2783;2784 2782 173 2678 3 EEDEEPESPPEK KEKTPSPKEEDEEPES EPESPPEKKTSTSPPP K E E E K K 0 0 0 1 0 0 6 0 0 0 0 1 0 0 3 1 0 0 0 0 0 0 12 0 1413.5783 Q9H1E3 Q9H1E3 207 218 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 0.0079934 70.089 By MS/MS By matching 1 1 2529900 1431400 1098500 1173 2637 1302 2984;2985 2785 2785 5373 1 EEDEEPESPPEKK KEKTPSPKEEDEEPES PESPPEKKTSTSPPPE K E E K K T 0 0 0 1 0 0 6 0 0 0 0 2 0 0 3 1 0 0 0 0 0 0 13 1 1541.6733 Q9H1E3 Q9H1E3 207 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 3.4803E-63 201.09 By MS/MS By MS/MS 2 2 25302000 9691400 15610000 1174 2637 1303 2986;2987;2988;2989 2786;2787;2788;2789;2790 2789 5373 5 EEDEHPYELLLTAETK RIHGSAAREEDEHPYE LLLTAETKKVVLVDGK R E E T K K 1 0 0 1 0 0 5 0 1 0 3 1 0 0 1 0 2 0 1 0 0 0 16 0 1915.9051 Q92625 Q92625 449 464 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2;3 0.0087095 67.115 By MS/MS By MS/MS 2 2 15640000 8759500 6880500 1175 2430 1304 2990;2991;2992;2993 2791;2792 2791 7825 2 EEDEPEERSGDETPGSEVPGDK EEQGLGKREEDEPEER GSEVPGDKAAEEQGDD R E E D K A 0 1 0 3 0 0 7 3 0 0 0 1 0 0 3 2 1 0 0 1 0 0 22 1 2386.9885 H3BQZ7;Q1KMD3 H3BQZ7 153 174 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 3 0.0044047 53.768 By MS/MS By MS/MS 1 1 40022000 18755000 21267000 1176 1132 1305 2994;2995 2793;2794 2793 2067;6541 2 EEECSTTDHPYKKPYMETSPSEEDSFYR IYHCTKRKEEECSTTD SEEDSFYRSSYPQQQG K E E Y R S 0 1 0 2 1 0 6 0 1 0 0 2 1 1 3 4 3 0 3 0 0 0 28 2 3441.4289 Q99593 Q99593 328 355 TBX5 T-box transcription factor TBX5 yes yes 3 0.025969 43.523 By MS/MS 1 0 0 0 1177 2554 1306 2996 2795 2795 7862 1 EEENADSDDEGELQDLLSQDWR TIKELQKKEEENADSD DLLSQDWRVKGALL__ K E E W R V 1 1 1 5 0 2 5 1 0 0 3 0 0 0 0 2 0 1 0 0 0 0 22 0 2592.0736 J3QQQ3;Q96NB3 J3QQQ3 79 100 ZNF830 Zinc finger protein 830 yes no 2 0.00033048 73.166 By MS/MS 1 9133000 9133000 0 1178 1252 1307 2997 2796 2796 2267 1 EEETSIDVAGKPNEVTK NEQKKESKEEETSIDV GKPNEVTKAAESPDQK K E E T K A 1 0 1 1 0 0 4 1 0 1 0 2 0 0 1 1 2 0 0 2 0 0 17 1 1844.9004 P53985 P53985 463 479 SLC16A1 Monocarboxylate transporter 1 yes yes 3 0.00077991 73.296 By MS/MS By MS/MS 1 1 9784600 5257500 4527100 1179 1764 1308 2998;2999 2797;2798 2797 3331;6736 2 EEEWDPEYTPK TTFQKRPKEEEWDPEY WDPEYTPKSKKYFLHD K E E P K S 0 0 0 1 0 0 4 0 0 0 0 1 0 0 2 0 1 1 1 0 0 0 11 0 1421.5987 Q9NYF8;H0YF14;Q9Y2W1 Q9NYF8 832 842 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 no no 2 0.00020548 118.71 By MS/MS By MS/MS 1 1 9363100 4798200 4564900 1180 2759;2897 1309 3000;3001 2799;2800 2799 7073;7123 2 EEHGGLIRSPR KPLTRGAKEEHGGLIR GGLIRSPRHEKKKKVR K E E P R H 0 2 0 0 0 0 2 2 1 1 1 0 0 0 1 1 0 0 0 0 0 0 11 1 1249.6527 P26368 P26368 71 81 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 2 0.0014578 101.38 By MS/MS By MS/MS 1 1 58228000 19683000 38545000 1181 1635 1310 3002;3003 2801;2802 2802 3023 2 EEIIIKKEVSPEVVR EQENMEKREEIIIKKE EVSPEVVRSKLSPSPS R E E V R S 0 1 0 0 0 0 4 0 0 3 0 2 0 0 1 1 0 0 0 3 0 0 15 2 1767.0142 Q5T200;A0A087WX14 Q5T200 189 203 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 3 0.022481 50.659 By MS/MS By matching 1 1 5081800 3297600 1784200 1182 2094 1311 3004;3005 2803 2803 4131 1 EEKKPIETGSPK YDSEKEKKEEKKPIET PIETGSPKTKECSVEK K E E P K T 0 0 0 0 0 0 3 1 0 1 0 3 0 0 2 1 1 0 0 0 0 0 12 2 1341.714 Q5T757;Q05519 Q5T757 380 391 SRSF11 Serine/arginine-rich splicing factor 11 yes no 3 0.022887 53.403 By matching By MS/MS 1 1 5455300 3013700 2441700 1183 1853 1312 3006;3007 2804 2804 3484 0 EELMSSDLEETAGSTSIPK KKKKSFSKEELMSSDL AGSTSIPKRKKSTPKE K E E P K R 1 0 0 1 0 0 4 1 0 1 2 1 1 0 1 4 2 0 0 0 0 0 19 0 2022.9303 O00567 O00567 515 533 NOP56 Nucleolar protein 56 yes yes 2;3 5.5067E-07 106.94 By MS/MS By MS/MS 3 3 57233000 32212000 25020000 1184 1338 1313;1314 3008;3009;3010;3011;3012;3013 2805;2806;2807;2808;2809;2810 2807 152 2411;2412 6 EELVSQGIMPPLKSPAAFHEQR KLQQRRTREELVSQGI PAAFHEQRRSLERART R E E Q R R 2 1 0 0 0 2 3 1 1 1 2 1 1 1 3 2 0 0 0 1 0 0 22 1 2463.258 W0Z7M9;B0QY74 W0Z7M9 28 49 mkl1;MKL1 Phosphatase and actin regulator yes no 3 0.022265 41.521 By MS/MS 1 4582900 4582900 0 1185 3015 1315 3014 2811 2811 1 EEPVSSGPEEAVGK KKKRKFSKEEPVSSGP GPEEAVGKSSSKKKKK K E E G K S 1 0 0 0 0 0 4 2 0 0 0 1 0 0 2 2 0 0 0 2 0 0 14 0 1413.6624 O00567 O00567 565 578 NOP56 Nucleolar protein 56 yes yes 2 5.6394E-14 140.31 By MS/MS By MS/MS 1 1 17293000 9147500 8145700 1186 1338 1316 3015;3016 2812;2813;2814;2815 2813 2413;2414 4 EESEESEAEPVQR SVSRKQAREESEESEA SEAEPVQRTAKKVEGN R E E Q R T 1 1 0 0 0 1 6 0 0 0 0 0 0 0 1 2 0 0 0 1 0 0 13 0 1517.6482 Q9BW71 Q9BW71 194 206 HIRIP3 HIRA-interacting protein 3 yes yes 2 0.0041053 75.89 By MS/MS By MS/MS 2 2 15657000 9021500 6635800 1187 2589 1317;1318 3017;3018;3019;3020 2816;2817;2818;2819;2820 2819 5234;5235 4 EFAATNSYLGYFGDAKSKYK PEIRDGQREFAATNSY GDAKSKYKRIYVKFIE R E F Y K R 3 0 1 1 0 0 1 2 0 0 1 3 0 2 0 2 1 0 3 0 0 0 20 2 2259.0848 Q2KHR3;H0YCQ7 Q2KHR3 1404 1423 QSER1 Glutamine and serine-rich protein 1 yes no 3 0.025801 44.998 By MS/MS 1 0 0 0 1188 2027 1319 3021 2821 2821 7729 1 EFAPSDEELDSYR RYVMIFKKEFAPSDEE DEELDSYRRGEEWDPQ K E F Y R R 1 1 0 2 0 0 3 0 0 0 1 0 0 1 1 2 0 0 1 0 0 0 13 0 1556.6631 I3L0X5;O75391;I3L4C3 I3L0X5 59 71 SPAG7 Sperm-associated antigen 7 yes no 2 0.0027559 83.045 By MS/MS By MS/MS 1 1 12459000 6864700 5594700 1189 1197 1320 3022;3023 2822;2823 2823 2177 2 EFDGKSLVSVTK EYCVQQLKEFDGKSLV KSLVSVTKEGLELPED K E F T K E 0 0 0 1 0 0 1 1 0 0 1 2 0 1 0 2 1 0 0 2 0 0 12 1 1308.6925 P08238;Q58FF8;Q58FF7 P08238 527 538 HSP90AB1;HSP90AB2P;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Putative heat shock protein HSP 90-beta-3 yes no 2 0.0053131 77.776 By MS/MS 1 3254000 3254000 0 1190 1542 1321 3024 2824 2824 2834 1 EFGSLPTTPSEQR KETDKYIKEFGSLPTT PTTPSEQRQRKIQKDR K E F Q R Q 0 1 0 0 0 1 2 1 0 0 1 0 0 1 2 2 2 0 0 0 0 0 13 0 1447.6943 O15400 O15400 72 84 STX7 Syntaxin-7 yes yes 2 0.00028559 117.7 By MS/MS 1 4935200 4935200 0 1191 1365 1322 3025 2825 2825 6604 1 EFGYDSPHDLDSD KYPLDVQKEFGYDSPH SPHDLDSD________ K E F S D - 0 0 0 4 0 0 1 1 1 0 1 0 0 1 1 2 0 0 1 0 0 0 13 0 1495.5739 Q96CW6 Q96CW6 297 309 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS yes yes 2 0.002661 75.788 By MS/MS 1 0 0 0 1192 2468 1323 3026 2826 2826 4967;7839 1 EFHLNESGDPSSK FENKVLSKEFHLNESG ESGDPSSKSTEIKWKS K E F S K S 0 0 1 1 0 0 2 1 1 0 1 1 0 1 1 3 0 0 0 0 0 0 13 0 1445.6423 A0A0C4DFV9;A0A087X027;Q01105;P0DME0 A0A0C4DFV9 131 143 SET;SETSIP Protein SET;Protein SETSIP yes no 3 0.0038294 71.933 By MS/MS By MS/MS 1 1 3775300 1889600 1885700 1193 122 1324 3027;3028 2827;2828 2827 2 EFITGDVEPTDAESEWHSENEEEEK QPLFDKRREFITGDVE SENEEEEKLAGDMKSK R E F E K L 1 0 1 2 0 0 9 1 1 1 0 1 0 1 1 2 2 1 0 1 0 0 25 0 2935.2156 E9PNJ7;A8MXH2;E9PKT8;C9J6D1;C9JZI7;Q99733;E9PS34 E9PNJ7 108 132 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 3 3.547E-14 99.407 By MS/MS By MS/MS 1 1 178920000 88061000 90856000 1194 439 1325 3029;3030 2829;2830 2830 828;829;6332 2 EFITGDVEPTDAESEWHSENEEEEKLAGDMK QPLFDKRREFITGDVE EKLAGDMKSK______ R E F M K S 2 0 1 3 0 0 9 2 1 1 1 2 1 1 1 2 2 1 0 1 0 0 31 1 3550.5206 E9PNJ7;A8MXH2;E9PKT8;C9J6D1;C9JZI7;Q99733 E9PNJ7 108 138 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 3;4 0.00024471 59.372 By MS/MS By MS/MS 3 4 1899800000 960540000 939300000 1195 439 1326;1327 3031;3032;3033;3034;3035;3036;3037 2831;2832;2833;2834 2831 49 828;829;6332 4 EFITGDVEPTDAESEWHSENEEEEKLAGDMKSK QPLFDKRREFITGDVE LAGDMKSK________ R E F S K - 2 0 1 3 0 0 9 2 1 1 1 3 1 1 1 3 2 1 0 1 0 0 33 2 3765.6476 E9PNJ7;A8MXH2;E9PKT8;C9J6D1;C9JZI7;Q99733 E9PNJ7 108 140 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 4 0.00017866 55.998 By MS/MS 1 55461000 0 55461000 1196 439 1328 3038 2835 2835 828;829;6332 1 EFQEHLQDSVK LKLERNLKEFQEHLQD EHLQDSVKNTKDLNVK K E F V K N 0 0 0 1 0 2 2 0 1 0 1 1 0 1 0 1 0 0 0 1 0 0 11 0 1358.6466 Q96Q89 Q96Q89 1203 1213 KIF20B Kinesin-like protein KIF20B yes yes 3 0.021536 44.847 By MS/MS 1 1337800 1337800 0 1197 2528 1329 3039 2836 2836 1 EFSGGSYSAK QNGSALKREFSGGSYS SGGSYSAKRQPMPSPS R E F A K R 1 0 0 0 0 0 1 2 0 0 0 1 0 1 0 3 0 0 1 0 0 0 10 0 1031.456 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25 H0Y7V8 901 910 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha yes no 2 0.0042221 80.455 By MS/MS By MS/MS 1 1 9874000 4838100 5036000 1198 187 1330 3040;3041 2837;2838 2837 329 2 EFVVMFSVVDENFSWYLEDNIK EKEKHIDREFVVMFSV WYLEDNIKTYCSEPEK R E F I K T 0 0 2 2 0 0 3 0 0 1 1 1 1 3 0 2 0 1 1 4 0 0 22 0 2709.2673 E9PFZ2;P00450 E9PFZ2 216 237 CP Ceruloplasmin yes no 2 0.013073 52.966 By matching By MS/MS 1 1 9832900 4173800 5659100 1199 787 1331 3042;3043 2839 2839 96 1 EGAASPAPETPQPTSPETSPK HDDRWETKEGAASPAP TSPETSPKETPMQPPE K E G P K E 3 0 0 0 0 1 3 1 0 0 0 1 0 0 6 3 3 0 0 0 0 0 21 0 2077.9804 Q9Y3X0 Q9Y3X0 372 392 CCDC9 Coiled-coil domain-containing protein 9 yes yes 2 0.0042231 58.626 By matching By MS/MS 1 1 7832500 4215900 3616500 1200 2913 1332 3044;3045 2840 2840 6059 1 EGASGRPGSPK LLMSNGNKEGASGRPG SGRPGSPKMEGTGKKA K E G P K M 1 1 0 0 0 0 1 3 0 0 0 1 0 0 2 2 0 0 0 0 0 0 11 1 1041.5203 E7EMV7;A0A0A0MRZ4;Q15025;E7EW15 E7EMV7 205 215 TNIP1 TNFAIP3-interacting protein 1 yes no 2 0.0047544 101.72 By MS/MS By MS/MS 1 1 5998600 5998600 0 1201 205 1333 3046;3047 2841;2842 2842 371;372 2 EGDELEDNGKNFYESDDDQKEK TQFVSPWKEGDELEDN SDDDQKEKTDKKKKPY K E G E K T 0 0 2 5 0 1 5 2 0 0 1 3 0 1 0 1 0 0 1 0 0 0 22 2 2603.0783 O00203 O00203 262 283 AP3B1 AP-3 complex subunit beta-1 yes yes 3 0.00072361 66.77 By MS/MS 1 16171000 0 16171000 1202 1325 1334 3048 2843 2843 2390 1 EGDGIFNPGGSVSNMYAMNLARYKYCPDIK MIEFIGWKEGDGIFNP YKYCPDIKEKGLSGSP K E G I K E 2 1 3 2 1 0 1 4 0 2 1 2 2 1 2 2 0 0 3 1 0 0 30 2 3366.5472 Q6ZQY3 Q6ZQY3 171 200 GADL1 Acidic amino acid decarboxylase GADL1 yes yes 3 0.025232 44.264 By MS/MS 1 0 0 0 1203 2180 1335 3049 2844 2844 7760;7761 1 EGDPVSLSTPLETEFGSPSELSPR SAVSQELREGDPVSLS SPSELSPRIEEQELSE R E G P R I 0 1 0 1 0 0 4 2 0 0 3 0 0 1 4 5 2 0 0 1 0 0 24 0 2530.2075 E9PMG4;Q9BUR4;E9PMR3 E9PMG4 69 92 WRAP53 Telomerase Cajal body protein 1 yes no 2;3 1.9643E-25 124.16 By MS/MS By MS/MS 3 3 57470000 30349000 27121000 1204 829 1336;1337 3050;3051;3052;3053;3054;3055 2845;2846;2847;2848 2848 1490;1491;1492;6451 4 EGDVLTLLESER RNVKGPVREGDVLTLL LTLLESEREARRLR__ R E G E R E 0 1 0 1 0 0 3 1 0 0 3 0 0 0 0 1 1 0 0 1 0 0 12 0 1359.6882 P62857 P62857 52 63 RPS28 40S ribosomal protein S28 yes yes 2 3.5336E-10 150.1 By MS/MS By MS/MS 1 1 9270000 4249400 5020600 1205 1803 1338 3056;3057 2849;2850 2849 2 EGEAAGGDHETESTSDKETDIDDR EAVSPPHREGEAAGGD KETDIDDRYGDLDSRT R E G D R Y 2 1 0 5 0 0 5 3 1 1 0 1 0 0 0 2 3 0 0 0 0 0 24 1 2563.043 Q92903 Q92903 23 46 CDS1 Phosphatidate cytidylyltransferase 1 yes yes 3 0.00043199 63.706 By matching By MS/MS 1 1 13643000 5373100 8269600 1206 2446 1339 3058;3059 2851 2851 6987 1 EGEDGDQPTTPPKPLK EAEVATEKEGEDGDQP TTPPKPLKTSKAETPT K E G L K T 0 0 0 2 0 1 2 2 0 0 1 2 0 0 4 0 2 0 0 0 0 0 16 1 1707.8315 M0R0Q7;P18858;B4E135 M0R0Q7 173 188 LIG1 DNA ligase;DNA ligase 1 yes no 3 0.008899 56.039 By MS/MS By matching 1 1 5086000 2727900 2358200 1207 1316 1340 3060;3061 2852 2852 6586 1 EGEEPTVYSDEEEPK HHVGKLLKEGEEPTVY YSDEEEPKDESARKND K E G P K D 0 0 0 1 0 0 6 1 0 0 0 1 0 0 2 1 1 0 1 1 0 0 15 0 1736.7265 O00264 O00264 173 187 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2 0.00033214 95.57 By MS/MS By matching 1 1 30793000 14861000 15933000 1208 1327 1341 3062;3063 2853 2853 2392;6587;7497 1 EGEEPTVYSDEEEPKDESAR HHVGKLLKEGEEPTVY EPKDESARKND_____ K E G A R K 1 1 0 2 0 0 7 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 20 1 2294.9663 O00264 O00264 173 192 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2;3 5.7507E-43 149.32 By MS/MS By MS/MS 2 2 4866000000 2584700000 2281300000 1209 1327 1342 3064;3065;3066;3067 2854;2855;2856;2857;2858;2859;2860;2861 2859 2392;6587;7497 8 EGEEPTVYSDEEEPKDESARK HHVGKLLKEGEEPTVY PKDESARKND______ K E G R K N 1 1 0 2 0 0 7 1 0 0 0 2 0 0 2 2 1 0 1 1 0 0 21 2 2423.0612 O00264 O00264 173 193 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3;4 7.7129E-14 117.3 By MS/MS By MS/MS 2 2 381490000 189690000 191790000 1210 1327 1343 3068;3069;3070;3071 2862;2863;2864;2865 2862 2392;6587;7497 4 EGFGLSENPFASLSPDEQKDEK SGASTNRKEGFGLSEN PDEQKDEKKLLEGIVK K E G E K K 1 0 1 2 0 1 4 2 0 0 2 2 0 2 2 3 0 0 0 0 0 0 22 1 2423.1129 B4DT96;C9JYA1;O15504 B4DT96 93 114 NUPL2 Nucleoporin-like protein 2 yes no 3 0.00037986 68.088 By MS/MS 1 4035300 4035300 0 1211 489 1344 3072 2866 2866 921;922 1 EGHMMDALYAQVK NARPQSPREGHMMDAL DALYAQVKKPRNSKPS R E G V K K 2 0 0 1 0 1 1 1 1 0 1 1 2 0 0 0 0 0 1 1 0 0 13 0 1491.685 Q5VWV2;Q8TEW0 Q5VWV2 1059 1071 PARD3 Partitioning defective 3 homolog yes no 2 7.2857E-11 141.91 By MS/MS 1 4051300 4051300 0 1212 2121 1345 3073 2867 2867 7749 1 EGHSLEMENENLVENGADSDEDDNSFLK GETGKRSKEGHSLEME EDDNSFLKQQSPQEPK K E G L K Q 1 0 4 4 0 0 6 2 1 0 3 1 1 1 0 3 0 0 0 1 0 0 28 0 3136.3051 F8VS07;F8VQE1;Q9UHB6 F8VS07 365 392 LIMA1 LIM domain and actin-binding protein 1 yes no 3 1.8793E-12 91.503 By MS/MS By MS/MS 1 1 35806000 21191000 14615000 1213 911 1346 3074;3075 2868;2869 2868 1634;1635 2 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK YRELLAKKEGITGPPA GSPTAAGKKTEKEEST K E G G K K 5 0 0 5 1 0 1 5 0 3 1 2 0 1 5 5 3 0 0 0 0 0 37 1 3601.673 E9PDE4;E7ES10;E7EVY3;B7Z574;A0A0C4DGB5;P20810;H0YA91 E9PDE4 141 177 CAST Calpastatin yes no 3;4 5.2205E-09 73.296 By MS/MS By MS/MS 1 1 33889000 9759500 24130000 1214 288 1347 3076;3077 2870;2871 2870 513 2 EGKPEIEGKPESEGEPGSETR EMEGGSEREGKPEIEG GEPGSETRAAGKRPAE R E G T R A 0 1 0 0 0 0 7 4 0 1 0 2 0 0 3 2 1 0 0 0 0 0 21 2 2241.0397 D6RD44;Q96EI5 D6RD44 91 111 TCEAL4 Transcription elongation factor A protein-like 4 yes no 3 0.0025447 60.602 By matching By MS/MS 1 1 14708000 8778800 5929500 1215 669 1348 3078;3079 2872 2872 1196 1 EGLELLK APNILENKEGLELLKT KEGLELLKTAIGKAGY K E G L K T 0 0 0 0 0 0 2 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 7 0 800.46437 P06733 P06733 222 228 ENO1 Alpha-enolase yes yes 2 0.0095753 110.61 By matching By MS/MS 1 1 4897400 1996400 2901000 1216 1532 1349 3080;3081 2873 2873 1 EGLELPEDEEEKK KSLVSVTKEGLELPED PEDEEEKKKMEESKAK K E G K K K 0 0 0 1 0 0 6 1 0 0 2 2 0 0 1 0 0 0 0 0 0 0 13 1 1543.7253 P07900;Q58FG0;Q58FF6;P08238;Q58FF7 P08238 539 551 HSP90AA1;HSP90AA5P;HSP90AB4P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 3 0.021187 52.79 By MS/MS 1 0 0 0 1217 1542;1540 1350 3082 2874 2874 1 EGLNMNLSSNSAK YKLVMENREGLNMNLS NLSSNSAKKELGSALL R E G A K K 1 0 3 0 0 0 1 1 0 0 2 1 1 0 0 3 0 0 0 0 0 0 13 0 1363.6402 A0A0A0MR46;Q6ZP01 A0A0A0MR46 635 647 RBM44 RNA-binding protein 44 yes no 3 0.016115 47.189 By MS/MS By matching 1 1 123010000 25103000 97911000 1218 170 1351 3083;3084 2875 2875 18 300;301 1 EGMNIVEAMER HVVFGKVKEGMNIVEA NIVEAMERFGSRNGKT K E G E R F 1 1 1 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 0 11 0 1277.5744 P62937 P62937 134 144 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 7.791E-06 136.96 By MS/MS By MS/MS 2 2 24098000 11067000 13032000 1219 1806 1352;1353 3085;3086;3087;3088 2876;2877;2878 2878 3 EGNTTEDDFPSSPGNGNK TSGSGFHREGNTTEDD SSPGNGNKSSNSSEER R E G N K S 0 0 3 2 0 0 2 3 0 0 0 1 0 1 2 2 2 0 0 0 0 0 18 0 1864.7711 Q15007 Q15007 295 312 WTAP Pre-mRNA-splicing regulator WTAP yes yes 2 4.0403E-20 137.27 By MS/MS By MS/MS 2 2 77937000 47098000 30839000 1220 1966 1354;1355 3089;3090;3091;3092 2879;2880;2881;2882;2883;2884 2880 20 3834;3835 6 EGPEPPEEVPPPTTPPVPK VEPQLPSKEGPEPPEE PTTPPVPKVEPKGDGI K E G P K V 0 0 0 0 0 0 4 1 0 0 0 1 0 0 9 0 2 0 0 2 0 0 19 0 1993.0044 P48634 P48634 597 615 PRRC2A Protein PRRC2A yes yes 2;3 3.676E-07 110.98 By MS/MS By MS/MS 2 2 39372000 21953000 17418000 1221 1718 1356 3093;3094;3095;3096 2885;2886;2887;2888;2889 2885 6710;6711 5 EGPGEEHFEDMASDEDMKPK PGSPGRGREGPGEEHF SDEDMKPKWEEEEMEE R E G P K W 1 0 0 3 0 0 5 2 1 0 0 2 2 1 2 1 0 0 0 0 0 0 20 1 2276.9202 Q99856 Q99856 107 126 ARID3A AT-rich interactive domain-containing protein 3A yes yes 3 0.01483 46.595 By MS/MS By matching 1 1 28319000 21771000 6547900 1222 2562 1357 3097;3098 2890 2890 5174 1 EGPLGWSSDGSLGSVLLDSPSSPR TLPELSCKEGPLGWSS LDSPSSPRVRLPCQPL K E G P R V 0 1 0 2 0 0 1 4 0 0 4 0 0 0 3 7 0 1 0 1 0 0 24 0 2399.1605 C9JRJ5;Q9UGP4 C9JRJ5 403 426 LIMD1 LIM domain-containing protein 1 yes no 2;3 1.4018E-33 132.79 By MS/MS By MS/MS 2 2 49695000 35669000 14026000 1223 605 1358 3099;3100;3101;3102 2891;2892;2893;2894 2894 1101;1102 4 EGPPAPPPVKPPPSPVNIR GQRLHPGREGPPAPPP PPSPVNIRTGPSGQSL R E G I R T 1 1 1 0 0 0 1 1 0 1 0 1 0 0 9 1 0 0 0 2 0 0 19 1 1945.0785 Q8TF74 Q8TF74 222 240 WIPF2 WAS/WASL-interacting protein family member 2 yes yes 3 0.007046 52.569 By MS/MS By matching 1 1 11931000 7363100 4567800 1224 2394 1359 3103;3104 2895 2895 4787 1 EGSEFSFSDGEVAEK DDKNIETKEGSEFSFS SDGEVAEKAEVYGSEN K E G E K A 1 0 0 1 0 0 4 2 0 0 0 1 0 2 0 3 0 0 0 1 0 0 15 0 1616.6842 Q9BVS4 Q9BVS4 330 344 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 2 0.027475 48.823 By matching By MS/MS 1 1 3797900 2172600 1625300 1225 2587 1360 3105;3106 2896 2896 1 EGSFESRYQQPFEDFR QLFHGRAREGSFESRY QQPFEDFRISQEHLAD R E G F R I 0 2 0 1 0 2 3 1 0 0 0 0 0 3 1 2 0 0 1 0 0 0 16 1 2020.8915 P19174;V9GY71;V9GYH5 P19174 1246 1261 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 3 0.0022732 65.085 By MS/MS By MS/MS 1 1 6785000 4000000 2785000 1226 1603 1361 3107;3108 2897;2898;2899 2898 2956;2957;7570 3 EGSHSPLDSADVR PDAERRPREGSHSPLD PLDSADVRVHVPRTSI R E G V R V 1 1 0 2 0 0 1 1 1 0 1 0 0 0 1 3 0 0 0 1 0 0 13 0 1368.627 A0A0A0MRC4;A0A0A0MSK4;Q86YR5 A0A0A0MRC4 445 457 GPSM1 G-protein-signaling modulator 1 yes no 2 0.0012579 103.11 By MS/MS By MS/MS 1 1 11057000 5978500 5078400 1227 178 1362 3109;3110 2900;2901 2901 317;318 2 EGSIETLSNSSGSTSGSIPR GSGTELQREGSIETLS STSGSIPRNFDGYRSP R E G P R N 0 1 1 0 0 0 2 3 0 2 1 0 0 0 1 7 2 0 0 0 0 0 20 0 1964.9287 K7ESE9;Q9H6U6 K7ESE9 655 674 BCAS3 Breast carcinoma-amplified sequence 3 yes no 2 0.0023476 66.777 By MS/MS By matching 1 1 6963900 3594000 3369900 1228 1292 1363 3111;3112 2902 2902 2324 1 EGSLGDELLPLGYSEPEQQEGASAGAPSPTLELASR PSRRGVHKEGSLGDEL PTLELASRSPSGGAAG K E G S R S 4 1 0 1 0 2 6 5 0 0 6 0 0 0 4 5 1 0 1 0 0 0 36 0 3654.7537 Q96CX2 Q96CX2 149 184 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 3 1.3198E-28 97.106 By MS/MS By MS/MS 1 1 69434000 38506000 30928000 1229 2469 1364 3113;3114 2903;2904 2904 4968;4969 2 EGSPAPLEPEPGAAQPK QTPESLSREGSPAPLE EPGAAQPKLAVIQEAR R E G P K L 3 0 0 0 0 1 3 2 0 0 1 1 0 0 5 1 0 0 0 0 0 0 17 0 1673.8261 Q01167 Q01167 396 412 FOXK2 Forkhead box protein K2 yes yes 2 0.0012185 73.802 By MS/MS By matching 1 1 79884000 48403000 31481000 1230 1829 1365 3115;3116 2905 2905 3424 1 EGSPIPHDPEFGSK QTPECLSREGSPIPHD HDPEFGSKLASVPEYR R E G S K L 0 0 0 1 0 0 2 2 1 1 0 1 0 1 3 2 0 0 0 0 0 0 14 0 1495.6943 P85037 P85037 443 456 FOXK1 Forkhead box protein K1 yes yes 2;3 2.1436E-107 219.97 By MS/MS By MS/MS 2 2 135160000 76493000 58672000 1231 1818 1366 3117;3118;3119;3120 2906;2907;2908 2906 3395 3 EGSQGELTPANSQSR SHSKSPPREGSQGELT TPANSQSRMSTNM___ R E G S R M 1 1 1 0 0 2 2 2 0 0 1 0 0 0 1 3 1 0 0 0 0 0 15 0 1559.7176 J3QQX0;C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098 J3QQX0 60 74 GPS1 COP9 signalosome complex subunit 1 yes no 2 0.0088481 90.561 By MS/MS By MS/MS 1 1 6629400 0 6629400 1232 157 1367 3121;3122 2909;2910 2909 278;6260 2 EGSQGEPWTPTANLK LTTPTKPKEGSQGEPW WTPTANLKMLISAVSP K E G L K M 1 0 1 0 0 1 2 2 0 0 1 1 0 0 2 1 2 1 0 0 0 0 15 0 1613.7686 E9PMT9;A0AVK6 E9PMT9 50 64 E2F8 Transcription factor E2F8 yes no 2 0.014743 67.102 By matching By MS/MS 1 1 5463800 3314400 2149400 1233 387 1368 3123;3124 2911 2911 1 EGSTQQLQTTSPK FIKVYWHREGSTQQLQ QLQTTSPKPLVQQPIL R E G P K P 0 0 0 0 0 3 1 1 0 0 1 1 0 0 1 2 3 0 0 0 0 0 13 0 1403.6892 A0A087X0H9;Q5T8P6 A0A087X0H9 611 623 RBM26 RNA-binding protein 26 yes no 2 0.00034201 110.54 By MS/MS By MS/MS 2 1 18775000 12232000 6543500 1234 126 1369 3125;3126;3127 2912;2913;2914;2915 2913 222;223 4 EGSTQQLQTTSPKPLVQQPILPVVK FIKVYWHREGSTQQLQ QPILPVVKQSVKERLG R E G V K Q 0 0 0 0 0 5 1 1 0 1 3 2 0 0 4 2 3 0 0 3 0 0 25 1 2715.5171 A0A087X0H9 A0A087X0H9 611 635 RBM26 yes yes 3 0.016389 42.851 By MS/MS By matching 1 1 26212000 13767000 12445000 1235 126 1370 3128;3129 2916 2916 222;223 1 EGSVLDILKSPGFASPK FRPAEILKEGSVLDIL SPGFASPKIDSVAAQP K E G P K I 1 0 0 1 0 0 1 2 0 1 2 2 0 1 2 3 0 0 0 1 0 0 17 1 1743.9407 P49790 P49790 605 621 NUP153 Nuclear pore complex protein Nup153 yes yes 2;3 1.4607E-24 153.06 By MS/MS By MS/MS 4 4 205310000 111370000 93946000 1236 1729 1371;1372 3130;3131;3132;3133;3134;3135;3136;3137 2917;2918;2919;2920;2921;2922;2923 2917 3246;3247;3248 7 EGSYDRYLR SRDPMYRREGSYDRYL GSYDRYLRMDDYCRRK R E G L R M 0 2 0 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 2 0 0 0 9 1 1157.5465 Q9HCD5;Q5JY17 Q9HCD5 124 132 NCOA5 Nuclear receptor coactivator 5 yes no 2 0.0023145 119.75 By MS/MS 1 35123000 35123000 0 1237 2692 1373 3138 2924 2924 5492 1 EGTAPSENGETKAEEAQKTESVDNEGE EEKQEAGKEGTAPSEN ESVDNEGE________ K E G G E - 3 0 2 1 0 1 8 3 0 0 0 2 0 0 1 2 3 0 0 1 0 0 27 2 2835.2166 Q15651 Q15651 73 99 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 yes yes 3 0.008257 56.72 By MS/MS By MS/MS 2 2 61899000 31507000 30391000 1238 1999 1374 3139;3140;3141;3142 2925;2926 2926 6835 2 EGTLTQVPLAPPPPGAPPSPAPAR DKEAPTPKEGTLTQVP PPSPAPARFTARGGRV K E G A R F 4 1 0 0 0 1 1 2 0 0 2 0 0 0 9 1 2 0 0 1 0 0 24 0 2317.243 P48634 P48634 1129 1152 PRRC2A Protein PRRC2A yes yes 2;3 0.00043223 61.963 By MS/MS By MS/MS 2 2 33336000 19829000 13507000 1239 1718 1375 3143;3144;3145;3146 2927;2928;2929;2930;2931;2932 2927 3203 6 EGTSQLASPLK LTTCEYRREGTSQLAS SQLASPLKLKYNQGVV R E G L K L 1 0 0 0 0 1 1 1 0 0 2 1 0 0 1 2 1 0 0 0 0 0 11 0 1129.5979 Q4KWH8 Q4KWH8 1379 1389 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 yes yes 2 0.017261 64.313 By matching By MS/MS 1 1 2906600 1556200 1350400 1240 2048 1376 3147;3148 2933 2933 4012 1 EGVLYVGSK AEAAGKTKEGVLYVGS GVLYVGSKTKEGVVHG K E G S K T 0 0 0 0 0 0 1 2 0 0 1 1 0 0 0 1 0 0 1 2 0 0 9 0 950.5073 D6RA31;E7EPV7;Q16143;P37840 D6RA31 35 43 SNCA;SNCB Alpha-synuclein;Beta-synuclein yes no 2 0.0064216 72.928 By MS/MS By matching 1 1 2334700 1347100 987550 1241 649 1377 3149;3150 2934 2934 7341 1 EGVTPWASFK TSDGEKKREGVTPWAS VTPWASFKKMVTPKKR R E G F K K 1 0 0 0 0 0 1 1 0 0 0 1 0 1 1 1 1 1 0 1 0 0 10 0 1120.5553 Q02952 Q02952 605 614 AKAP12 A-kinase anchor protein 12 yes yes 2 3.1094E-05 122.18 By MS/MS By MS/MS 1 1 30098000 16477000 13621000 1242 1843 1378 3151;3152 2935;2936 2935 3455 2 EGVTPWASFKK TSDGEKKREGVTPWAS TPWASFKKMVTPKKRV R E G K K M 1 0 0 0 0 0 1 1 0 0 0 2 0 1 1 1 1 1 0 1 0 0 11 1 1248.6503 Q02952 Q02952 605 615 AKAP12 A-kinase anchor protein 12 yes yes 2 1.5696E-05 140.63 By MS/MS By MS/MS 1 1 120730000 63990000 56735000 1243 1843 1379 3153;3154 2937;2938 2937 3455 2 EGYVPQEEVPVYENK WRKQRRVKEGYVPQEE EVPVYENKYVKFFKSK K E G N K Y 0 0 1 0 0 1 4 1 0 0 0 1 0 0 2 0 0 0 2 3 0 0 15 0 1778.8363 Q9BRP8 Q9BRP8 34 48 WIBG Partner of Y14 and mago yes yes 2 1.646E-09 122.18 By MS/MS By MS/MS 1 1 28483000 16329000 12154000 1244 2572 1380 3155;3156 2939;2940 2939 7869 2 EHAPLASPVENKEVYQCR VNKVAKPKEHAPLASP NKEVYQCRLCNAKLSS K E H C R L 2 1 1 0 1 1 3 0 1 0 1 1 0 0 2 1 0 0 1 2 0 0 18 1 2126.0215 Q9ULJ3 Q9ULJ3 708 725 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 3 0.0040445 57.973 By MS/MS By MS/MS 1 1 17384000 9340800 8043500 1245 2847 1381 3157;3158 2941;2942 2941 5854 2 EHASIDAQSGAGVPNPSTSASPK ELEDLVRREHASIDAQ PSTSASPKKSPPPAKD R E H P K K 4 0 1 1 0 1 1 2 1 1 0 1 0 0 3 5 1 0 0 1 0 0 23 0 2207.0455 Q8IXJ6 Q8IXJ6 348 370 SIRT2 NAD-dependent protein deacetylase sirtuin-2 yes yes 3 0.0020095 55.852 By matching By MS/MS 1 1 19705000 10609000 9096400 1246 2278 1382 3159;3160 2943 2943 4574;4575;4576;6950 1 EHIEIIAPSPQR RMDPFATKEHIEIIAP IIAPSPQRSRSFSVGI K E H Q R S 1 1 0 0 0 1 2 0 1 3 0 0 0 0 2 1 0 0 0 0 0 0 12 0 1388.7412 C9J185;E7ER02;Q9NZJ5 C9J185 586 597 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 yes no 2 0.0019506 117.48 By MS/MS By MS/MS 1 1 1673700 1673700 0 1247 554 1383 3161;3162 2944;2945;2946 2944 1025 3 EHNSMWASLSSPDAEAVEPDFSSIER KLPSNVAREHNSMWAS PDFSSIERLFSFPAAK R E H E R L 3 1 1 2 0 0 4 0 1 1 1 0 1 1 2 6 0 1 0 1 0 0 26 0 2890.2716 A0A0A0MQU1;Q27J81 A0A0A0MQU1 47 72 INF2 Inverted formin-2 yes no 3 6.1451E-12 90.694 By MS/MS By matching 1 1 26836000 19631000 7205000 1248 162 1384 3163;3164 2947 2947 294 1 EHSLQVSPSLEK PSLHSFIKEHSLQVSP QVSPSLEKGAKADTGL K E H E K G 0 0 0 0 0 1 2 0 1 0 2 1 0 0 1 3 0 0 0 1 0 0 12 0 1352.6936 O95235 O95235 526 537 KIF20A Kinesin-like protein KIF20A yes yes 2;3 1.5499E-115 231.07 By MS/MS By MS/MS 2 2 23325000 11416000 11909000 1249 1479 1385 3165;3166;3167;3168 2948;2949;2950;2951 2951 2735 4 EHYPVSSPSSPSPPAQPGGVSR TYPMPTAKEHYPVSSP AQPGGVSRNSPLDCGS K E H S R N 1 1 0 0 0 1 1 2 1 0 0 0 0 0 6 6 0 0 1 2 0 0 22 0 2219.0607 H0YM23;O75179 H0YM23 1920 1941 ANKRD17 Ankyrin repeat domain-containing protein 17 yes no 3 0.00035483 68.49 By MS/MS By MS/MS 2 3 37972000 13294000 24679000 1250 1095 1386;1387 3169;3170;3171;3172;3173 2952;2953;2954;2955 2955 2016;2017;2018;2019;7453 3 EIAEAYLGK SMVLTKMKEIAEAYLG IAEAYLGKTVTNAVVT K E I G K T 2 0 0 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 992.51786 P11142;E9PKE3;E9PN89;E9PQQ4;E9PQK7;E9PLF4;E9PI65;E9PPY6;E9PK54 P11142 129 137 HSPA8 Heat shock cognate 71 kDa protein no no 2 0.0054184 95.352 By MS/MS By MS/MS 1 1 5932200 2549400 3382800 1251 1560;812 1388 3174;3175 2956;2957 2957 2 EIAQDFK LPFQRLVREIAQDFKT REIAQDFKTDLRFQSA R E I F K T 1 0 0 1 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 7 0 849.42323 K7EMV3;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431 K7EMV3 74 80 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2 0.016445 100.74 By MS/MS By matching 1 1 36240000 18277000 17963000 1252 477 1389 3176;3177 2958 2958 1 EIAQDFKTDLR LPFQRLVREIAQDFKT QDFKTDLRFQSAAIGG R E I L R F 1 1 0 2 0 1 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 11 1 1334.683 K7EMV3;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431 K7EMV3 74 84 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2 0.0030933 99.53 By MS/MS By MS/MS 1 1 14581000 8090100 6490500 1253 477 1390 3178;3179 2959;2960 2959 2 EIDCLSPEAQK SPAAAQSREIDCLSPE CLSPEAQKLAEARLAA R E I Q K L 1 0 0 1 1 1 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 11 0 1288.5969 Q32MZ4;C9JTC6 Q32MZ4 11 21 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes no 2 0.0017273 94.538 By MS/MS By MS/MS 1 1 8638400 4625500 4012800 1254 2034 1391 3180;3181 2961;2962 2961 3975 2 EIEDAEKYSFMATVTK GEELKQAKEIEDAEKY SFMATVTKAPKKQIQF K E I T K A 2 0 0 1 0 0 3 0 0 1 0 2 1 1 0 1 2 0 1 1 0 0 16 1 1860.8815 O43865 O43865 21 36 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 2 5.1679E-15 134.13 By matching By MS/MS 1 1 21892000 13458000 8434000 1255 1397 1392 3182;3183 2963 2963 2565 1 EIEIDIEPTDKVER KVKTLTGKEIEIDIEP EPTDKVERIKERVEEK K E I E R I 0 1 0 2 0 0 4 0 0 3 0 1 0 0 1 0 1 0 0 1 0 0 14 1 1684.8519 F8VSA6;E9PS38;S4R3E9;E9PL57;Q15843 F8VSA6 12 25 NEDD8;NEDD8-MDP1 NEDD8 yes no 3 0.011899 72.705 By MS/MS 1 1035600 0 1035600 1256 819 1393 3184 2964;2965 2964 2 EIESSPQYR LRAAQLAREIESSPQY IESSPQYRLRIAMEND R E I Y R L 0 1 0 0 0 1 2 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 9 0 1107.5197 Q8WWM7;H3BUF6;H3BSK9 Q8WWM7 302 310 ATXN2L Ataxin-2-like protein yes no 2 0.0017085 140.49 By MS/MS By MS/MS 1 1 15595000 7748500 7846900 1257 2409 1394 3185;3186 2966;2967 2967 4816 2 EIEYVETVTSR NALKYEHKEIEYVETV YVETVTSRQSEIQKFI K E I S R Q 0 1 0 0 0 0 3 0 0 1 0 0 0 0 0 1 2 0 1 2 0 0 11 0 1324.6511 Q9UHR4 Q9UHR4 160 170 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 2.1824E-06 144.65 By MS/MS By MS/MS 1 1 8386200 4608600 3777600 1258 2816 1395 3187;3188 2968;2969 2968 7931 2 EIFSGSLR EDGIKREREIFSGSLR EIFSGSLRTQTHPTEE R E I L R T 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 2 0 0 0 0 0 0 8 0 907.47633 Q68DQ2 Q68DQ2 172 179 CRYBG3 Very large A-kinase anchor protein yes yes 2 0.023452 68.847 By MS/MS By matching 1 1 3111800 1667300 1444600 1259 2135 1396 3189;3190 2970 2970 1 EIFSYMKEREEQFILTDYMNR SFNPMYAKEIFSYMKE ILTDYMNRQIEITSDM K E I N R Q 0 2 1 1 0 1 4 0 0 2 1 1 2 2 0 1 1 0 2 0 0 0 21 2 2741.2829 Q8WWL7 Q8WWL7 1132 1152 CCNB3 G2/mitotic-specific cyclin-B3 yes yes 3 0.023517 48.288 By MS/MS 1 0 0 0 1260 2408 1397 3191 2971 2971 7818 1 EIGGLTQVNKNKK YRLYVSVKEIGGLTQV TQVNKNKKWRELATNL K E I K K W 0 0 2 0 0 1 1 2 0 1 1 3 0 0 0 0 1 0 0 1 0 0 13 2 1427.8096 O14497;H0Y488;A0A1B0GTU5;A0A087WUV6 O14497 1060 1072 ARID1A AT-rich interactive domain-containing protein 1A yes no 3 0.019254 50.024 By MS/MS By matching 1 1 8335600 3374400 4961100 1261 1339 1398 3192;3193 2972 2972 0 EIKCSPSESPLMEK RMKRKIEREIKCSPSE SESPLMEKKNSLKEDH R E I E K K 0 0 0 0 1 0 3 0 0 1 1 2 1 0 2 3 0 0 0 0 0 0 14 1 1633.7691 Q8WUM9 Q8WUM9 261 274 SLC20A1 Sodium-dependent phosphate transporter 1 yes yes 2 0.0039294 94.616 By MS/MS By MS/MS 1 1 11399000 6259300 5140000 1262 2402 1399 3194;3195 2973;2974 2973 4805;4806 2 EIKDILIQYDR YVDEASKKEIKDILIQ DILIQYDRTLLVADPR K E I D R T 0 1 0 2 0 1 1 0 0 3 1 1 0 0 0 0 0 0 1 0 0 0 11 1 1404.7613 M0R210;A0A087WZ27;P62249 M0R210 90 100 RPS16;ZNF90 40S ribosomal protein S16 yes no 3 0.00021162 98.156 By MS/MS 1 0 0 0 1263 106 1400 3196 2975 2975 1 EIKLSDDFDSPVKGPLCK AKIPLKKREIKLSDDF PVKGPLCKSVTPTKEF R E I C K S 0 0 0 3 1 0 1 1 0 1 2 3 0 1 2 2 0 0 0 1 0 0 18 2 2047.0296 Q96T23;H0YER1;H0YCN2 Q96T23 388 405 RSF1 Remodeling and spacing factor 1 yes no 3 0.0070276 57.171 By MS/MS By MS/MS 2 2 15610000 8396900 7212900 1264 2544 1401;1402 3197;3198;3199;3200 2976;2977 2977 5135;5136 2 EILGTAQSVGCNVDGR RELSGTIKEILGTAQS VGCNVDGRHPHDIIDD K E I G R H 1 1 1 1 1 1 1 3 0 1 1 0 0 0 0 1 1 0 0 2 0 0 16 0 1674.7995 P30050 P30050 131 146 RPL12 60S ribosomal protein L12 yes yes 2 0.020724 57.802 By MS/MS By MS/MS 1 1 2382300 1114600 1267700 1265 1651 1403 3201;3202 2978;2979 2978 2 EILSPLFPR SKKHLQEREILSPLFP ILSPLFPRNGTKSPEA R E I P R N 0 1 0 0 0 0 1 0 0 1 2 0 0 1 2 1 0 0 0 0 0 0 9 0 1070.6124 Q5VWN6 Q5VWN6 672 680 FAM208B Protein FAM208B yes yes 2 0.0047541 86.882 By MS/MS By MS/MS 1 1 5131400 3203300 1928100 1266 2120 1404 3203;3204 2980;2981 2980 4205 2 EIMSPTPVELHK RKMKQEIKEIMSPTPV PTPVELHKVTLYKDSD K E I H K V 0 0 0 0 0 0 2 0 1 1 1 1 1 0 2 1 1 0 0 1 0 0 12 0 1379.7119 F5H4N6;Q9Y3R0;H0YFK8 F5H4N6 926 937 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.0078017 70.412 By MS/MS By matching 1 1 2772500 1611800 1160700 1267 885 1405 3205;3206 2982 2982 1590 1 EIPASPSR GAAEKPKKEIPASPSR EIPASPSRTKIPAEKE K E I S R T 1 1 0 0 0 0 1 0 0 1 0 0 0 0 2 2 0 0 0 0 0 0 8 0 855.44503 Q9NYZ3 Q9NYZ3 239 246 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.018826 73.887 By MS/MS By MS/MS 1 1 8161200 4765400 3395700 1268 2762 1406 3207;3208 2983;2984 2984 5668;5669 2 EIPFLNEQTNSK VMEQNTVKEIPFLNEQ LNEQTNSKIEKTDNVE K E I S K I 0 0 2 0 0 1 2 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 12 0 1418.7042 Q92576;E7ER40 Q92576 1495 1506 PHF3 PHD finger protein 3 yes no 2 0.0013649 72.243 By MS/MS By MS/MS 1 1 78263000 42710000 35553000 1269 2425 1407 3209;3210 2985;2986 2985 2 EIPSATQSPISK KLEKKDAKEIPSATQS ATQSPISKKRKKKGFL K E I S K K 1 0 0 0 0 1 1 0 0 2 0 1 0 0 2 3 1 0 0 0 0 0 12 0 1256.6612 Q9BQG0;I3L1L3 Q9BQG0 1156 1167 MYBBP1A Myb-binding protein 1A yes no 2 1.3308E-10 152 By MS/MS By MS/MS 1 1 218250000 121490000 96760000 1270 2570 1408 3211;3212 2987;2988;2989;2990 2990 5184;5185 4 EIPSATQSPISKK KLEKKDAKEIPSATQS TQSPISKKRKKKGFLP K E I K K R 1 0 0 0 0 1 1 0 0 2 0 2 0 0 2 3 1 0 0 0 0 0 13 1 1384.7562 Q9BQG0;I3L1L3 Q9BQG0 1156 1168 MYBBP1A Myb-binding protein 1A yes no 2;3 0.00037382 97.823 By MS/MS By MS/MS 2 2 52661000 28941000 23720000 1271 2570 1409 3213;3214;3215;3216 2991;2992;2993 2992 5184;5185 3 EIPSATQSPISKKR KLEKKDAKEIPSATQS QSPISKKRKKKGFLPE K E I K R K 1 1 0 0 0 1 1 0 0 2 0 2 0 0 2 3 1 0 0 0 0 0 14 2 1540.8573 Q9BQG0;I3L1L3 Q9BQG0 1156 1169 MYBBP1A Myb-binding protein 1A yes no 3 0.002129 76.378 By MS/MS By MS/MS 1 1 20966000 10764000 10202000 1272 2570 1410 3217;3218 2994;2995 2994 5184;5185 2 EIPSLSPTIPR QSRVLPPKEIPSLSPT SLSPTIPRQGSLPQTS K E I P R Q 0 1 0 0 0 0 1 0 0 2 1 0 0 0 3 2 1 0 0 0 0 0 11 0 1208.6765 Q9ULD5 Q9ULD5 42 52 ZNF777 Zinc finger protein 777 yes yes 2 0.016701 64.65 By MS/MS By MS/MS 1 1 2975200 1397500 1577800 1273 2842 1411 3219;3220 2996;2997 2997 5845 2 EIQNGNLHESDSESVPR EKKKNKKKEIQNGNLH SDSESVPRDFKLSDAL K E I P R D 0 1 2 1 0 1 3 1 1 1 1 0 0 0 1 3 0 0 0 1 0 0 17 0 1909.8766 Q86UP2 Q86UP2 66 82 KTN1 Kinectin yes yes 2;3 1.1815E-05 108.47 By MS/MS By MS/MS 6 6 847300000 454470000 392830000 1274 2236 1412;1413 3221;3222;3223;3224;3225;3226;3227;3228;3229;3230;3231;3232 2998;2999;3000;3001;3002;3003;3004;3005;3006;3007;3008;3009 3009 22;36 4477;4478;4479 12 EIQNGNLHESDSESVPRDFK EKKKNKKKEIQNGNLH ESVPRDFKLSDALAVE K E I F K L 0 1 2 2 0 1 3 1 1 1 1 1 0 1 1 3 0 0 0 1 0 0 20 1 2300.0669 Q86UP2 Q86UP2 66 85 KTN1 Kinectin yes yes 3 0.014756 51.225 By matching By MS/MS 1 1 13309000 7385400 5923200 1275 2236 1414 3233;3234 3010 3010 22;36 4477;4478;4479 1 EIQRSQSWDDRGER GAFGRSPREIQRSQSW SWDDRGERRFEKSARR R E I E R R 0 3 0 2 0 2 2 1 0 1 0 0 0 0 0 2 0 1 0 0 0 0 14 2 1760.819 O75420 O75420 151 164 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 3 0.021472 53.21 By MS/MS By matching 1 1 9615700 4873100 4742700 1276 1439 1415 3235;3236 3011 3011 1 EIQTAVR KRSTITSREIQTAVRL REIQTAVRLLLPGELA R E I V R L 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 7 0 815.45012 Q16778;P33778;P23527;P06899;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q96A08 Q16778 94 100 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BA Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-A yes no 2 0.017555 100.07 By MS/MS By matching 1 1 21321000 10621000 10699000 1277 1534 1416 3237;3238 3012 3012 1 EISEASENIYSDVR RKKTRKAKEISEASEN ENIYSDVRGLSQNQQI K E I V R G 1 1 1 1 0 0 3 0 0 2 0 0 0 0 0 3 0 0 1 1 0 0 14 0 1610.7424 Q8WYP5 Q8WYP5 1781 1794 AHCTF1 Protein ELYS yes yes 2 2.5822E-05 118.23 By MS/MS 1 5695300 5695300 0 1278 2417 1417 3239 3013 3013 4849 1 EISPGSGPGEIR ITEEMNGKEISPGSGP GSGPGEIRKVEPVTQK K E I I R K 0 1 0 0 0 0 2 3 0 2 0 0 0 0 2 2 0 0 0 0 0 0 12 0 1197.599 O43491;E9PK52;E9PHY5;H0Y5B0;E9PMV8;Q6R5J7;E9PMG5 O43491 713 724 EPB41L2 Band 4.1-like protein 2 yes no 2 0.0033957 82.202 By MS/MS By MS/MS 1 1 12240000 7336600 4903200 1279 1387 1418 3240;3241 3014;3015 3015 2536;2537 2 EISRIPYPDMEPKPATK KGPWVTVREISRIPYP MEPKPATKKATRTKAI R E I T K K 1 1 0 1 0 0 2 0 0 2 0 2 1 0 4 1 1 0 1 0 0 0 17 2 1971.0135 Q9P2J8 Q9P2J8 118 134 ZNF624 Zinc finger protein 624 yes yes 2 0.022031 51.495 By MS/MS 1 0 0 0 1280 2793 1419 3242 3016 3016 7926 1 EITALAPSTMK GIADRMQKEITALAPS ALAPSTMKIKIIAPPE K E I M K I 2 0 0 0 0 0 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 0 11 0 1160.6111 P63261;P60709;P63267;P68133;P68032;P62736;A6NL76 P63261 316 326 ACTG1;ACTB;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 2 0.00068657 109.44 By MS/MS By MS/MS 2 2 47136000 25101000 22035000 1281 1785;1799 1420;1421 3243;3244;3245;3246 3017;3018;3019;3020 3020 227 4 EITQDTNDITYADLNLPK HEPEKNAREITQDTND YADLNLPKGKKPAPQA R E I P K G 1 0 2 3 0 1 1 0 0 2 2 1 0 0 1 0 3 0 1 0 0 0 18 0 2063.0059 P78324 P78324 419 436 SIRPA Tyrosine-protein phosphatase non-receptor type substrate 1 yes yes 2;3 1.9936E-13 122.78 By MS/MS By MS/MS 2 1 25734000 22496000 3238700 1282 1813 1422 3247;3248;3249 3021;3022;3023 3021 7659 3 EITVHSGSTVELK RILERRTKEITVHSGS SGSTVELKCRAEGRPS K E I L K C 0 0 0 0 0 0 2 1 1 1 1 1 0 0 0 2 2 0 0 2 0 0 13 0 1398.7355 Q6WRI0 Q6WRI0 1754 1766 IGSF10 Immunoglobulin superfamily member 10 yes yes 2 0.00044028 108.23 By MS/MS 1 4628500 0 4628500 1283 2176 1423 3250 3024 3024 4351;4352 1 EIVLADVIDNDSWR FGVDVTTKEIVLADVI VIDNDSWRLWPSGDRS K E I W R L 1 1 1 3 0 0 1 0 0 2 1 0 0 0 0 1 0 1 0 2 0 0 14 0 1643.8155 E9PBS1;P22234;D6RF62 E9PBS1 202 215 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 2.9641E-08 128.67 By MS/MS 1 4250500 4250500 0 1284 759 1424 3251 3025 3025 1 EIYNTIR LNDTVDGKEIYNTIRR KEIYNTIRRKTKDAFY K E I I R R 0 1 1 0 0 0 1 0 0 2 0 0 0 0 0 0 1 0 1 0 0 0 7 0 907.47633 E9PGC0;P20936 E9PGC0 292 298 RASA1 Ras GTPase-activating protein 1 yes no 2 0.004663 138.37 By MS/MS By MS/MS 1 1 17116000 8305600 8810400 1285 790 1425 3252;3253 3026;3027 3026 7384 2 EKDECTPTRK ESRSKDKKEKDECTPT DECTPTRKERKRRHST K E K R K E 0 1 0 1 1 0 2 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 10 2 1262.5925 O15042;E7ET15;H7C4V2 O15042 914 923 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 2 0.0037236 94.402 By MS/MS 1 5083300 0 5083300 1286 1353 1426 3254 3028 3028 6596 1 EKDLLPSPAGPVPSKDPK SSKQSAAKEKDLLPSP PVPSKDPKTEHGSRKR K E K P K T 1 0 0 2 0 0 1 1 0 0 2 3 0 0 5 2 0 0 0 1 0 0 18 2 1874.0149 Q9UHB7 Q9UHB7 808 825 AFF4 AF4/FMR2 family member 4 yes yes 3 0.023049 47.855 By matching By MS/MS 1 1 5691100 3502800 2188300 1287 2813 1427 3255;3256 3029 3029 1 EKEESPQPR FTSVPGGREKEESPQP KEESPQPRRKRQPSSS R E K P R R 0 1 0 0 0 1 3 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 9 1 1098.5306 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 88 96 C12orf43 Uncharacterized protein C12orf43 yes no 2 0.0022453 140.78 By MS/MS By MS/MS 1 1 26879000 15516000 11362000 1288 709 1428 3257;3258 3030;3031 3031 1259 2 EKELSPPPGLPSK ETSGTSAREKELSPPP PPPGLPSKIGSISRQS R E K S K I 0 0 0 0 0 0 2 1 0 0 2 2 0 0 4 2 0 0 0 0 0 0 13 1 1377.7504 H0YHT2;A0A1B0GV47;Q7Z4S6;H0YIM6;H0YI78 H0YHT2 556 568 KIF21A Kinesin-like protein KIF21A yes no 2 0.00025613 112.02 By MS/MS By MS/MS 1 1 6965200 3736300 3228900 1289 375 1429 3259;3260 3032;3033 3033 705 2 EKEPGEQASVPLSPK SPIRRKGKEKEPGEQA ASVPLSPKKGSEASAA K E K P K K 1 0 0 0 0 1 3 1 0 0 1 2 0 0 3 2 0 0 0 1 0 0 15 1 1594.8203 P42858 P42858 1187 1201 HTT Huntingtin yes yes 3 0.0036787 62.617 By MS/MS By MS/MS 1 1 8846400 4216700 4629700 1290 1700 1430 3261;3262 3034;3035 3034 3125 2 EKEVDGLLTSEPMGSPVSSK LKEEPKGKEKEVDGLL MGSPVSSKTESVSDKE K E K S K T 0 0 0 1 0 0 3 2 0 0 2 2 1 0 2 4 1 0 0 2 0 0 20 1 2089.0249 Q8WWM7;H3BUF6 Q8WWM7 580 599 ATXN2L Ataxin-2-like protein yes no 2;3 1.3591E-13 115.57 By MS/MS By MS/MS 3 3 42929000 26970000 15959000 1291 2409 1431;1432 3263;3264;3265;3266;3267;3268 3036;3037;3038;3039 3039 321 4817;6979 4 EKFSFEPK PSVLESVKEKFSFEPK EKFSFEPKIRSPRRFI K E K P K I 0 0 0 0 0 0 2 0 0 0 0 2 0 2 1 1 0 0 0 0 0 0 8 1 1010.5073 P23443;K7ERJ3 P23443 424 431 RPS6KB1 Ribosomal protein S6 kinase beta-1 yes no 2 0.015938 84.31 By MS/MS By MS/MS 1 1 12736000 5817100 6919100 1292 1623 1433 3269;3270 3040;3041 3041 3000 2 EKGPTTGEGALDLSDVHSPPKSPEGK VIRRCQQKEKGPTTGE PPKSPEGKTSAQTTPS K E K G K T 1 0 0 2 0 0 3 4 1 0 2 3 0 0 4 3 2 0 0 1 0 0 26 2 2632.298 O95684 O95684 139 164 FGFR1OP FGFR1 oncogene partner yes yes 4 0.0049746 47.554 By MS/MS 1 7881200 0 7881200 1293 1496 1434 3271 3042 3042 2772;2773 1 EKLQEEGGGSDEEETGSPSEDGMQSAR KRLIAEAKEKLQEEGG EDGMQSARTQARPREP K E K A R T 1 1 0 2 0 2 7 5 0 0 1 1 1 0 1 4 1 0 0 0 0 0 27 1 2838.1734 Q13610 Q13610 41 67 PWP1 Periodic tryptophan protein 1 homolog yes yes 3 2.1353E-42 130.57 By MS/MS By MS/MS 1 2 203500000 99729000 103770000 1294 1929 1435;1436 3272;3273;3274 3043;3044;3045 3043 257 3724 3 EKLQSFDSPER KGRGNDRREKLQSFDS QSFDSPERKRIKYSRE R E K E R K 0 1 0 1 0 1 2 0 0 0 1 1 0 1 1 2 0 0 0 0 0 0 11 1 1334.6466 E9PGM9;P78332 E9PGM9 886 896 RBM6 RNA-binding protein 6 yes no 2 8.2376E-06 138.31 By MS/MS By MS/MS 1 1 28886000 13424000 15462000 1295 793 1437 3275;3276 3046;3047 3046 1424 2 EKPDEYVSSSR ALDKQLAKEKPDEYVS DEYVSSSRSLGLPIAA K E K S R S 0 1 0 1 0 0 2 0 0 0 0 1 0 0 1 3 0 0 1 1 0 0 11 1 1295.5994 A0A087WWH3;Q9NZM4 A0A087WWH3 1144 1154 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein yes no 2 0.016712 71.888 By MS/MS 1 7146400 0 7146400 1296 77 1438 3277 3048 3048 133 0 EKPDSDDDLDIASLVTAK RVIKSSGREKPDSDDD IASLVTAKLVNTTITP R E K A K L 2 0 0 5 0 0 1 0 0 1 2 2 0 0 1 2 1 0 0 1 0 0 18 1 1930.9371 Q86V48 Q86V48 655 672 LUZP1 Leucine zipper protein 1 yes yes 2;3 6.2205E-07 107.63 By MS/MS By MS/MS 2 1 38284000 34024000 4260400 1297 2241 1439 3278;3279;3280 3049;3050;3051;3052 3052 4485 4 EKQSDDEVYAPGLDIESSLK EQRDRSIREKQSDDEV LDIESSLKQLAERRTD R E K L K Q 1 0 0 3 0 1 3 1 0 1 2 2 0 0 1 3 0 0 1 1 0 0 20 1 2222.059 Q15459 Q15459 448 467 SF3A1 Splicing factor 3A subunit 1 yes yes 3 2.2134E-05 78.552 By MS/MS By matching 1 1 6968000 4970200 1997800 1298 1991 1440 3281;3282 3053 3053 7717 1 EKQSSEEEEKETR GRQERSTKEKQSSEEE EEEEKETRGVQKRRGG K E K T R G 0 1 0 0 0 1 6 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 13 2 1607.7275 A2AAT0;Q92504 A2AAT0 182 194 SLC39A7 Zinc transporter SLC39A7 yes no 3 0.005207 71.545 By MS/MS By MS/MS 1 1 51840000 25490000 26350000 1299 396 1441 3283;3284 3054;3055 3055 763;764 2 EKSPVREPVDNLSPEER HSKSPHFREKSPVREP DNLSPEERDARTVFCM R E K E R D 0 2 1 1 0 0 4 0 0 0 1 1 0 0 3 2 0 0 0 2 0 0 17 2 1979.9912 Q86U06 Q86U06 147 163 RBM23 Probable RNA-binding protein 23 yes yes 3 0.01534 51.127 By MS/MS 1 8535900 0 8535900 1300 2231 1442 3285 3056 3056 4471 1 EKTPELPEPSVK PSPAPEKKEKTPELPE ELPEPSVKVKEPSVQE K E K V K V 0 0 0 0 0 0 3 0 0 0 1 2 0 0 3 1 1 0 0 1 0 0 12 1 1352.7187 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 218 229 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2;3 5.2498E-160 248.67 By MS/MS By MS/MS 2 2 111670000 63544000 48124000 1301 442;1311 1443 3286;3287;3288;3289 3057;3058;3059;3060;3061;3062;3063;3064 3062 6333 8 EKTPSPKEEDEEPESPPEK PTASKASKEKTPSPKE EPESPPEKKTSTSPPP K E K E K K 0 0 0 1 0 0 7 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 19 2 2180.9961 Q9H1E3 Q9H1E3 200 218 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 1.3438E-10 119.94 By MS/MS By MS/MS 2 1 20561000 12315000 8245700 1302 2637 1444 3290;3291;3292 3065;3066;3067 3067 5373 3 ELAEDGYSGVEVR ELNEFLTRELAEDGYS GYSGVEVRVTPTRTEI R E L V R V 1 1 0 1 0 0 3 2 0 0 1 0 0 0 0 1 0 0 1 2 0 0 13 0 1422.6627 P23396;E9PL09;F2Z2S8;H0YF32;H0YCJ7;E9PPU1;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 28 40 RPS3 40S ribosomal protein S3 yes no 2 0.0096314 71.03 By matching By MS/MS 1 1 10917000 5935600 4981200 1303 1622 1445 3293;3294 3068 3068 0 ELAEQTLNNIK ALIVEPSRELAEQTLN EQTLNNIKQFKKYIDN R E L I K Q 1 0 2 0 0 1 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 0 1271.6721 F1T0B3;A0A087X2G1;Q92499 F1T0B3 216 226 DDX1 ATP-dependent RNA helicase DDX1 yes no 2 0.0012006 106.18 By MS/MS By MS/MS 1 1 3913100 2317600 1595600 1304 149 1446 3295;3296 3069;3070 3069 1 ELAGNTSSPPLSPGRPSPMQR MDFSRRLRELAGNTSS GRPSPMQRLLQPFQPG R E L Q R L 1 2 1 0 0 1 1 2 0 0 2 0 1 0 5 4 1 0 0 0 0 0 21 1 2178.0851 Q9H165 Q9H165 321 341 BCL11A B-cell lymphoma/leukemia 11A yes yes 3 0.007317 49.537 By MS/MS By matching 1 1 4789000 2586100 2202800 1305 2634 1447 3297;3298 3071 3071 5357;5358 1 ELDEEGSDPPLPGR QKAEALMRELDEEGSD SDPPLPGRAQRIRQVL R E L G R A 0 1 0 2 0 0 3 2 0 0 2 0 0 0 3 1 0 0 0 0 0 0 14 0 1509.6947 C9JQV0;Q9BRJ6;H7C0T1;H7C2R9 C9JQV0 169 182 C7orf50 Uncharacterized protein C7orf50 yes no 2 1.5073E-20 157.5 By MS/MS By MS/MS 1 1 35454000 17391000 18063000 1306 602 1448 3299;3300 3072;3073;3074;3075 3073 1094 4 ELDEGRYGVYEDENYEVGSDDEEIPFK KHGWQIERELDEGRYG DDEEIPFKCFICRQSF R E L F K C 0 1 1 4 0 0 7 3 0 1 1 1 0 1 1 1 0 0 3 2 0 0 27 1 3195.368 O15541 O15541 235 261 RNF113A RING finger protein 113A yes yes 3 0.019534 40.718 By MS/MS By matching 1 1 11281000 8310200 2970600 1307 1369 1449 3301;3302 3076 3076 2505 1 ELDPSLVSANDSPSGMQTR NASPQKLRELDPSLVS SPSGMQTRCVWSPLAS R E L T R C 1 1 1 2 0 1 1 1 0 0 2 0 1 0 2 4 1 0 0 1 0 0 19 0 2002.9266 Q5UIP0;H7C2B5 Q5UIP0 2150 2168 RIF1 Telomere-associated protein RIF1 yes no 2;3 8.8515E-29 146.28 By MS/MS By MS/MS 4 4 161230000 93666000 67569000 1308 2112 1450;1451 3303;3304;3305;3306;3307;3308;3309;3310 3077;3078;3079;3080;3081;3082;3083;3084 3082 283 4174;4175 8 ELEAIFGRPVVDGEEGEPHSISPR PIPPPDAKELEAIFGR EPHSISPRPRPPGRPV K E L P R P 1 2 0 1 0 0 5 3 1 2 1 0 0 1 3 2 0 0 0 2 0 0 24 1 2619.2929 G5E9C7;P36507 G5E9C7 177 200 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 3 2.7633E-06 80.832 By MS/MS By MS/MS 1 1 62963000 28735000 34228000 1309 993 1452 3311;3312 3085;3086;3087 3087 1818 3 ELEEEEENSDEDELDSHTMVK KRHEEQQRELEEEEEN LDSHTMVKTSVESVGT R E L V K T 0 0 1 3 0 0 8 0 1 0 2 1 1 0 0 2 1 0 0 1 0 0 21 0 2506.0177 A0A087WZ06;Q13188;E5RFQ9 A0A087WZ06 197 217 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes no 2;3 9.0122E-11 108.97 By MS/MS By MS/MS 3 3 91992000 44609000 47383000 1310 103 1453;1454 3313;3314;3315;3316;3317;3318 3088;3089;3090;3091;3092 3092 12 192 5 ELEKPIQSKPQSPVIQAAAVSPK NQVLQEARELEKPIQS QAAAVSPKFVRLKHSQ R E L P K F 3 0 0 0 0 3 2 0 0 2 1 3 0 0 4 3 0 0 0 2 0 0 23 2 2444.3639 Q9Y6D5 Q9Y6D5 207 229 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 3 4.6902E-07 84.905 By MS/MS By matching 1 1 22999000 11820000 11179000 1311 2945 1455 3319;3320 3093 3093 6118 1 ELEKRASGQAFELILSPR ASSDIQVKELEKRASG FELILSPRSKESVPEF K E L P R S 2 2 0 0 0 1 3 1 0 1 3 1 0 1 1 2 0 0 0 0 0 0 18 2 2043.1113 A2A2D0;P16949 A2A2D0 10 27 STMN1 Stathmin yes no 3 8.0253E-06 85.61 By MS/MS By MS/MS 2 2 27134000 12452000 14683000 1312 393 1456;1457 3321;3322;3323;3324 3094;3095;3096;3097;3098 3096 752;753 5 ELEQHIQTSDPENFQSEER SSASVDNRELEQHIQT ENFQSEERSDSDVNND R E L E R S 0 1 1 1 0 3 5 0 1 1 1 0 0 1 1 2 1 0 0 0 0 0 19 0 2315.0302 Q96K76 Q96K76 925 943 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 3 0.0068173 58.01 By matching By MS/MS 1 1 9071900 4829800 4242100 1313 2511 1458 3325;3326 3099 3099 7007 1 ELESPLTPGKVCR KKKKESSKELESPLTP LTPGKVCRAEEGKSPF K E L C R A 0 1 0 0 1 0 2 1 0 0 2 1 0 0 2 1 1 0 0 1 0 0 13 1 1484.7657 O15014 O15014 740 752 ZNF609 Zinc finger protein 609 yes yes 3 0.029485 48.823 By MS/MS By matching 1 1 7104900 4921100 2183800 1314 1351 1459 3327;3328 3100 3100 1 ELFDDPSYVNVQNLDK PPPPCPGRELFDDPSY VNVQNLDKARQAVGGA R E L D K A 0 0 2 3 0 1 1 0 0 0 2 1 0 1 1 1 0 0 1 2 0 0 16 0 1894.8949 P29353;Q5T188;H0Y539;X6R6D0 P29353 420 435 SHC1 SHC-transforming protein 1 yes no 2;3 1.8649E-36 171.62 By MS/MS By MS/MS 1 2 98062000 56902000 41160000 1315 1645 1460 3329;3330;3331 3101;3102;3103 3101 7586 3 ELFDDPSYVNVQNLDKAR PPPPCPGRELFDDPSY VQNLDKARQAVGGAGP R E L A R Q 1 1 2 3 0 1 1 0 0 0 2 1 0 1 1 1 0 0 1 2 0 0 18 1 2122.0331 P29353;Q5T188;H0Y539;X6R6D0 P29353 420 437 SHC1 SHC-transforming protein 1 yes no 2;3 2.766E-09 113.11 By MS/MS By MS/MS 2 2 46054000 24870000 21184000 1316 1645 1461 3332;3333;3334;3335 3104;3105;3106;3107 3106 7586 4 ELGSTEDIYLASR ITNPSQQKELGSTEDI EDIYLASRKVKELSVI K E L S R K 1 1 0 1 0 0 2 1 0 1 2 0 0 0 0 2 1 0 1 0 0 0 13 0 1452.7096 A0A0J9YYF7;Q86T65 A0A0J9YYF7 662 674 DAAM2 Disheveled-associated activator of morphogenesis 2 yes no 2 0.01456 55.353 By MS/MS 1 0 0 0 1317 332 1462 3336 3108 3108 619;7242 1 ELHFEGEEVDYDVSPSDPK IIENLDTRELHFEGEE DVSPSDPKIQEGTKY_ R E L P K I 0 0 0 3 0 0 4 1 1 0 1 1 0 1 2 2 0 0 1 2 0 0 19 0 2190.9593 F8WBV7;C9IY79;Q13393 F8WBV7 32 50 PLD1 Phospholipase D1 yes no 2;3 0.001724 70.089 By MS/MS By MS/MS 2 2 11496000 5854000 5642000 1318 540 1463 3337;3338;3339;3340 3109;3110;3111;3112 3110 989;7308 4 ELHYLPFPSP PCLADGQKELHYLPFP HYLPFPSP________ K E L S P - 0 0 0 0 0 0 1 0 1 0 2 0 0 1 3 1 0 0 1 0 0 0 10 0 1198.6023 Q8N565 Q8N565 205 214 MREG Melanoregulin yes yes 2 0.00012685 115.78 By MS/MS By MS/MS 1 1 5516700 2498900 3017800 1319 2314 1464 3341;3342 3113;3114 3113 4649 2 ELILGSETPSSPR LVLRPWIRELILGSET SETPSSPRAGQLLEDA R E L P R A 0 1 0 0 0 0 2 1 0 1 2 0 0 0 2 3 1 0 0 0 0 0 13 0 1384.7198 R4GNJ5;A0A0C4DGT6;Q96AP0 R4GNJ5 15 27 ACD Adrenocortical dysplasia protein homolog yes no 2 0.00090261 105.99 By MS/MS By MS/MS 1 1 12973000 7451300 5521700 1320 300 1465 3343;3344 3115;3116 3115 536;537 2 ELIPQESPR GKVGPDGKELIPQESP LIPQESPRVGGFGFVA K E L P R V 0 1 0 0 0 1 2 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 9 0 1067.5611 Q96DF8 Q96DF8 286 294 DGCR14 Protein DGCR14 yes yes 2 0.013868 69.65 By MS/MS By MS/MS 1 1 16731000 9702200 7028600 1321 2473 1466 3345;3346 3117;3118 3117 4978 2 ELISNASDALDK SNKEIFLRELISNASD NASDALDKIRYESLTD R E L D K I 2 0 1 2 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1274.6354 P08238;F8W026;Q96GW1;P14625 P08238 42 53 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 2 0.00054164 110.38 By MS/MS By MS/MS 1 1 16088000 6648400 9439500 1322 1542;1580 1467 3347;3348 3119;3120 3120 2 ELKPMASGASSA KGGVADSRELKPMASG MASGASSA________ R E L S A - 3 0 0 0 0 0 1 1 0 0 1 1 1 0 1 3 0 0 0 0 0 0 12 1 1147.5543 Q8WWI5 Q8WWI5 646 657 SLC44A1 Choline transporter-like protein 1 yes yes 2 0.011177 69.216 By matching By MS/MS 1 1 20831000 11659000 9171900 1323 2406 1468 3349;3350 3121 3121 4814 1 ELKTDSSPNQAR YIQFSNHKELKTDSSP DSSPNQARAQAALQAV K E L A R A 1 1 1 1 0 1 1 0 0 0 1 1 0 0 1 2 1 0 0 0 0 0 12 1 1344.6634 K7ES59;A0A087WU68;A6NLN1;P26599 K7ES59 105 116 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2 0.013129 67.234 By MS/MS 1 6992900 0 6992900 1324 42 1469 3351 3122 3122 72 1 ELLAKPIGPDDAIDALSSDFTCGSPTAAGK VTIPPKYRELLAKPIG GSPTAAGKKTEKEEST R E L G K K 5 0 0 4 1 0 1 3 0 2 3 2 0 1 3 3 2 0 0 0 0 0 30 1 3016.4699 E9PCH5;F8W7E0 E9PCH5 185 214 CAST yes no 3 1.5288E-15 86.266 By MS/MS By matching 1 1 64205000 56586000 7619000 1325 763 1470 3352;3353 3123 3123 1386 1 ELLDTSFEDLSKPK EPLESQDRELLDTSFE FEDLSKPKRKLADGRQ R E L P K R 0 0 0 2 0 0 2 0 0 0 3 2 0 1 1 2 1 0 0 0 0 0 14 1 1620.8247 P78345 P78345 230 243 RPP38 Ribonuclease P protein subunit p38 yes yes 2;3 7.1831E-08 128.96 By MS/MS By MS/MS 2 1 9481400 5535500 3945800 1326 1814 1471 3354;3355;3356 3124;3125 3125 6750 2 ELLHSVHPESPNLK QTDGILTKELLHSVHP HPESPNLKTSLCFKEQ K E L L K T 0 0 1 0 0 0 2 0 2 0 3 1 0 0 2 2 0 0 0 1 0 0 14 0 1598.8417 Q9Y217 Q9Y217 552 565 MTMR6 Myotubularin-related protein 6 yes yes 2;3 6.1681E-21 158.34 By MS/MS By MS/MS 2 2 29654000 14705000 14950000 1327 2881 1472 3357;3358;3359;3360 3126;3127;3128 3126 6012 3 ELLLLPGQPQTPVFPSTHDPR PAGAALGRELLLLPGQ FPSTHDPRTVTLDFRN R E L P R T 0 1 0 1 0 2 1 1 1 0 4 0 0 1 5 1 2 0 0 1 0 0 21 0 2341.243 A0A0A0MQV9;Q9UPS6 A0A0A0MQV9 1505 1525 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B yes no 3 2.9663E-06 84.653 By MS/MS By MS/MS 1 1 11743000 7464200 4279100 1328 164 1473 3361;3362 3129;3130 3130 6263 2 ELLPTGSVADR E L D R 1 1 0 1 0 0 1 1 0 0 2 0 0 0 1 1 1 0 0 1 0 0 11 0 1156.6088 REV__Q92508 yes yes 2 0.0033771 91.701 By MS/MS By MS/MS 2 2 15520000 8205400 7315000 + 1329 3005 1474 3363;3364;3365;3366 3131;3132 3131 6198;7149 2 ELLSPLSEPDDRYPLIVK MFSPMEEKELLSPLSE DRYPLIVKIDLNLLTR K E L V K I 0 1 0 2 0 0 2 0 0 1 4 1 0 0 3 2 0 0 1 1 0 0 18 1 2083.1201 Q9UHB7 Q9UHB7 700 717 AFF4 AF4/FMR2 family member 4 yes yes 3 0.016074 49.655 By MS/MS By matching 1 1 18171000 10475000 7695900 1330 2813 1475 3367;3368 3133 3133 5771;5772 1 ELLVSQHTVQLVGGLSPLSSPSDTK PNTDADTRELLVSQHT LSSPSDTKAESPAEKV R E L T K A 0 0 0 1 0 2 1 2 1 0 5 1 0 0 2 5 2 0 0 3 0 0 25 0 2591.3806 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 405 429 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.002881 51.089 By MS/MS By matching 1 1 5322700 3494500 1828200 1331 725 1476 3369;3370 3134 3134 1293 1 ELNFVTDSVEQELPSSPKQPICFDR GIIDDVMKELNFVTDS KQPICFDRQSTLKKSF K E L D R Q 0 1 1 2 1 2 3 0 0 1 2 1 0 2 3 3 1 0 0 2 0 0 25 1 2934.4069 B4DP81;Q8TAP6 B4DP81 68 92 CEP76 Centrosomal protein of 76 kDa yes no 3 0.00022988 63.726 By MS/MS By matching 1 1 5419600 4341500 1078100 1332 487 1477 3371;3372 3135;3136 3135 920 2 ELNSEVGSETESNVDSEFAR NTMSSLVKELNSEVGS NVDSEFARTQFEDLVP K E L A R T 1 1 2 1 0 0 5 1 0 0 1 0 0 1 0 4 1 0 0 2 0 0 20 0 2197.9611 M0R0C4;M0QZ28;Q9Y4J8 M0R0C4 60 79 DTNA Dystrobrevin alpha yes no 2 0.0065712 58.01 By MS/MS 1 3615800 3615800 0 1333 1309 1478 3373 3137 3137 2352 1 ELPPLSPSLSR RRGLDSMRELPPLSPS PLSPSLSRRALSPLPT R E L S R R 0 1 0 0 0 0 1 0 0 0 3 0 0 0 3 3 0 0 0 0 0 0 11 0 1194.6608 Q86UU1 Q86UU1 456 466 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 2 0.0073906 73.082 By MS/MS By MS/MS 1 1 3245000 1957200 1287800 1334 2238 1479 3374;3375 3138;3139 3138 4481 2 ELPSLSPAPDTGLSPSKR LKPAHRKRELPSLSPA TGLSPSKRTHQRSKSD R E L K R T 1 1 0 1 0 0 1 1 0 0 3 1 0 0 4 4 1 0 0 0 0 0 18 1 1850.9738 A0A0B4J1S8;Q9UBF8;A0A0A0MSL0 A0A0B4J1S8 265 282 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 0.0031035 56.339 By MS/MS By MS/MS 1 1 10528000 5435800 5091800 1335 257 1480 3376;3377 3140;3141 3140 464;6294 2 ELQEAAAVPTTPR VTRKRLERELQEAAAV AAVPTTPRRGRPPKTR R E L P R R 3 1 0 0 0 1 2 0 0 0 1 0 0 0 2 0 2 0 0 1 0 0 13 0 1381.7201 Q96T58 Q96T58 1937 1949 SPEN Msx2-interacting protein yes yes 2 0.0059224 96.113 By MS/MS By MS/MS 1 1 17849000 10150000 7698500 1336 2545 1481 3378;3379 3142;3143 3142 7017;7018 2 ELQGDGPPSSPTNDPTVK RKYKKKKKELQGDGPP PTNDPTVKYETQPRFI K E L V K Y 0 0 1 2 0 1 1 2 0 0 1 1 0 0 4 2 2 0 0 1 0 0 18 0 1837.8694 Q12873 Q12873 704 721 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 2 0.00081368 74.537 By MS/MS By MS/MS 1 1 11154000 4863600 6290100 1337 1880 1482 3380;3381 3144;3145 3144 3568;3569 2 ELQGDGPPSSPTNDPTVKYETQPR RKYKKKKKELQGDGPP VKYETQPRFITATGGT K E L P R F 0 1 1 2 0 2 2 2 0 0 1 1 0 0 5 2 3 0 1 1 0 0 24 1 2612.2354 Q12873 Q12873 704 727 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 3 0.00013458 69.03 By MS/MS By MS/MS 1 1 19105000 9653100 9451800 1338 1880 1483 3382;3383 3146;3147;3148 3147 3568;3569 3 ELQLLSPDYK EEECRMLKELQLLSPD QLLSPDYKQAMEYKKK K E L Y K Q 0 0 0 1 0 1 1 0 0 0 3 1 0 0 1 1 0 0 1 0 0 0 10 0 1204.634 H0Y758;Q5SQS8 H0Y758 104 113 C10orf120 Uncharacterized protein C10orf120 yes no 2 0.0013609 77.923 By MS/MS 1 19618000 19618000 0 1339 1034 1484 3384 3149 3149 7439 1 ELQRMLDTEKQSR SQFECRVRELQRMLDT LDTEKQSRARADQRIT R E L S R A 0 2 0 1 0 2 2 0 0 0 2 1 1 0 0 1 1 0 0 0 0 0 13 2 1632.8254 H7BYJ3;O14578;F5H4K4 H7BYJ3 691 703 CIT Citron Rho-interacting kinase yes no 3 0.03083 41.54 By MS/MS 1 1635900 0 1635900 1340 1153 1485 3385 3150 3150 0 ELRAPSPPVEHPR STPDPPRRELRAPSPP SPPVEHPRLLRSVPTP R E L P R L 1 2 0 0 0 0 2 0 1 0 1 0 0 0 4 1 0 0 0 1 0 0 13 1 1483.7896 Q86WR7 Q86WR7 174 186 PROSER2 Proline and serine-rich protein 2 yes yes 3 0.028882 52.93 By MS/MS 1 0 0 0 1341 2248 1486 3386 3151 3151 4501 1 ELRIEALLFYTATIHNR E L N R 2 2 1 0 0 0 2 0 1 2 3 0 0 1 0 0 2 0 1 0 0 0 17 1 2059.1215 REV__E7EUC4 yes no 3 0.02829 41.695 By matching By MS/MS 1 2 208270000 85580000 122690000 + 1342 2972 1487 3387;3388;3389 3152 3152 7972 1 ELRNKDTNIEVTFLSSNITSSSK SLVEFHLKELRNKDTN SNITSSSKITIPKQQR K E L S K I 0 1 3 1 0 0 2 0 0 2 2 2 0 1 0 5 3 0 0 1 0 0 23 2 2582.3188 G5E9W0;Q53H76 G5E9W0 333 355 PLA1A Phospholipase A1 member A yes no 2 0.015924 45.54 By MS/MS 1 10724000 10724000 0 1343 997 1488 3390 3153 3153 1825;1826;1827 1 ELSDQATASPIVAR DSLDSKGKELSDQATA TASPIVARTDLSNIPG K E L A R T 3 1 0 1 0 1 1 0 0 1 1 0 0 0 1 2 1 0 0 1 0 0 14 0 1456.7522 Q5JSH3 Q5JSH3 88 101 WDR44 WD repeat-containing protein 44 yes yes 2 0.0038475 85.837 By matching By MS/MS 1 1 28650000 14906000 13745000 1344 2073 1489 3391;3392 3154 3154 4070 0 ELSESVQQQSTPVPLISPK SKAEMDLKELSESVQQ PVPLISPKRQIRSRFQ K E L P K R 0 0 0 0 0 3 2 0 0 1 2 1 0 0 3 4 1 0 0 2 0 0 19 0 2066.0895 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 458 476 ZMYND8 Protein kinase C-binding protein 1 yes no 2;3 0.0010732 70.615 By MS/MS By MS/MS 2 2 43040000 27840000 15200000 1345 69 1490 3393;3394;3395;3396 3155;3156;3157;3158;3159;3160 3160 118 6 ELSESVQQQSTPVPLISPKR SKAEMDLKELSESVQQ VPLISPKRQIRSRFQL K E L K R Q 0 1 0 0 0 3 2 0 0 1 2 1 0 0 3 4 1 0 0 2 0 0 20 1 2222.1907 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 458 477 ZMYND8 Protein kinase C-binding protein 1 yes no 3 1.2587E-05 79.935 By MS/MS By matching 1 1 12210000 6599300 5610900 1346 69 1491 3397;3398 3161 3161 118 1 ELSKELNHEIQR LPNKELSRELSKELNH ELNHEIQRTENSLANE R E L Q R T 0 1 1 0 0 1 3 0 1 1 2 1 0 0 0 1 0 0 0 0 0 0 12 1 1494.7791 A0A0C4DGG3;Q8NHM5 A0A0C4DGG3 317 328 KDM2B Lysine-specific demethylase 2B yes no 3 0.012135 57.885 By MS/MS By matching 1 1 12684000 6249000 6434500 1347 291 1492 3399;3400 3162 3162 517 1 ELSNSPLR PHFSPEHKELSNSPLR ELSNSPLRENSFGSPL K E L L R E 0 1 1 0 0 0 1 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 8 0 914.48214 Q9UQ35 Q9UQ35 1316 1323 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0073024 133.99 By MS/MS By MS/MS 1 1 18694000 8937700 9755900 1348 2877 1493 3401;3402 3163;3164 3163 5946;5947 2 ELSNSPLRENSFGSPLEFR PHFSPEHKELSNSPLR FGSPLEFRNSGPLGTE K E L F R N 0 2 2 0 0 0 3 1 0 0 3 0 0 2 2 4 0 0 0 0 0 0 19 1 2178.0705 Q9UQ35 Q9UQ35 1316 1334 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0010334 71.418 By MS/MS By matching 2 2 56130000 31938000 24192000 1349 2877 1494 3403;3404;3405;3406 3165;3166 3165 5946;5947;5948 2 ELSPAGSISK KKLKRMKKELSPAGSI SPAGSISKNSPATLFE K E L S K N 1 0 0 0 0 0 1 1 0 1 1 1 0 0 1 3 0 0 0 0 0 0 10 0 987.52368 O95453 O95453 617 626 PARN Poly(A)-specific ribonuclease PARN yes yes 2 2.2979E-05 126.03 By MS/MS By MS/MS 1 1 81987000 45281000 36706000 1350 1490 1495 3407;3408 3167;3168 3167 2761 2 ELSRPGDLATPESSAAASPR FSFLSLRRELSRPGDL SSAAASPRRIRAEGVP R E L P R R 4 2 0 1 0 0 2 1 0 0 2 0 0 0 3 4 1 0 0 0 0 0 20 1 2010.997 Q8IUW3 Q8IUW3 315 334 SPATA2L Spermatogenesis-associated protein 2-like protein yes yes 3 0.0014725 64.962 By MS/MS By MS/MS 1 2 10458000 4842900 5614900 1351 2262 1496 3409;3410;3411 3169;3170;3171 3170 4540;4541 3 ELSSEPQTPPAQK SRAIRGEKELSSEPQT PQTPPAQKGTVPLPTI K E L Q K G 1 0 0 0 0 2 2 0 0 0 1 1 0 0 3 2 1 0 0 0 0 0 13 0 1410.6991 E9PGC8;P78559 E9PGC8 735 747 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.025311 70.552 By MS/MS By MS/MS 1 1 14600000 8419200 6180300 1352 791 1497 3412;3413 3172;3173 3173 1 ELSTSPCNPIVR DRILKTSRELSTSPCN SPCNPIVRQKESELQM R E L V R Q 0 1 1 0 1 0 1 0 0 1 1 0 0 0 2 2 1 0 0 1 0 0 12 0 1371.6816 Q9H2Y7;H3BNX5 Q9H2Y7 637 648 ZNF106 Zinc finger protein 106 yes no 2 0.0030424 104.24 By MS/MS By MS/MS 1 1 31698000 17239000 14459000 1353 2649 1498 3414;3415 3174;3175 3175 5400;7050 2 ELTNRHSLPFSLPSQMEPRPDVPR SSDPWTGRELTNRHSL EPRPDVPRLGSTFSLD R E L P R L 0 3 1 1 0 1 2 0 1 0 3 0 1 1 5 3 1 0 0 1 0 0 24 2 2802.4235 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 611 634 CBL E3 ubiquitin-protein ligase CBL yes no 4 0.0090033 41.711 By MS/MS By matching 1 1 7215000 3493700 3721300 1354 345 1499 3416;3417 3176 3176 36 6310 1 ELTSNYIPSYLNNHER ALEKKILKELTSNYIP SYLNNHERSSEQNRNL K E L E R S 0 1 3 0 0 0 2 0 1 1 2 0 0 0 1 2 1 0 2 0 0 0 16 0 1948.9279 H0Y9K5;E9PBG4;E7EW95;E7EVD6;E7ETE3;E7EUW2;Q9HAR2 H0Y9K5 711 726 ADGRL3;LPHN3 Latrophilin-3 yes no 3 6.2596E-05 93.243 By MS/MS By MS/MS 1 1 7809800 4854000 2955800 1355 737 1500 3418;3419 3177;3178 3178 7367 2 ELVEPLTPSGEAPNQALLR LRRLLQERELVEPLTP APNQALLRILKETEFK R E L L R I 2 1 1 0 0 1 3 1 0 0 4 0 0 0 3 1 1 0 0 1 0 0 19 0 2033.0793 E9PFD7;P00533;Q504U8 E9PFD7 642 660 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor yes no 2 0.0077949 70.089 By MS/MS By matching 1 1 48027000 25299000 22728000 1356 778 1501 3420;3421 3179 3179 6437 1 ELVGPPLAETVFTPK QNLNPSNKELVGPPLA AETVFTPKTSPENVQD K E L P K T 1 0 0 0 0 0 2 1 0 0 2 1 0 1 3 0 2 0 0 2 0 0 15 0 1596.8763 P49792 P49792 1384 1398 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.022217 65.395 By MS/MS 1 2281700 0 2281700 1357 1730 1502 3422 3180 3180 1 ELVLDNSR NRTPSDVKELVLDNSR ELVLDNSRSNEGKLEG K E L S R S 0 1 1 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 0 8 0 944.49271 P39687;H0YN26;H7BZ09 P39687 21 28 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 2 0.01923 86.953 By MS/MS By MS/MS 1 2 6370200 1645700 4724500 1358 1681 1503 3423;3424;3425 3181;3182;3183 3183 3 ELVLSSPEDLTQDFEEMKR LPTISGHRELVLSSPE QDFEEMKREERALLAE R E L K R E 0 1 0 2 0 1 4 0 0 0 3 1 1 1 1 2 1 0 0 1 0 0 19 1 2265.0835 E9PGC8;P78559 E9PGC8 760 778 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 3 0.0025228 56.121 By MS/MS 1 3774700 3774700 0 1359 791 1504 3426 3184 3184 1418;1419 1 ELVNEIIYVAQEK CLLEDKARELVNEIIY IIYVAQEKLRNDTFED R E L E K L 1 0 1 0 0 1 3 0 0 2 1 1 0 0 0 0 0 0 1 2 0 0 13 0 1546.8243 Q68DQ2 Q68DQ2 1307 1319 CRYBG3 Very large A-kinase anchor protein yes yes 2 0.00091161 91.961 By MS/MS By MS/MS 1 1 3522300 2035700 1486600 1360 2135 1505 3427;3428 3185;3186 3185 7756 2 ELWSPIQQVTATSSK GELRGPGKELWSPIQQ QVTATSSKWAQFVLPP K E L S K W 1 0 0 0 0 2 1 0 0 1 1 1 0 0 1 3 2 1 0 1 0 0 15 0 1673.8625 A0A087WZ47;E5RJC6;Q6NTE8 A0A087WZ47 29 43 C5orf45 UPF0544 protein C5orf45 yes no 2 0.010775 59.57 By MS/MS By matching 1 1 2409800 1230900 1178900 1361 109 1506 3429;3430 3187 3187 201 1 EMEHNTVCAAGTSPVGEIGEEK INNHLIAKEMEHNTVC VGEIGEEKILPTSETK K E M E K I 2 0 1 0 1 0 5 3 1 1 0 1 1 0 1 1 2 0 0 2 0 0 22 0 2344.0311 P18583;H7C1M2 P18583 1544 1565 SON Protein SON yes no 2;3 4.1885E-05 82.578 By MS/MS By MS/MS 2 2 87529000 39773000 47756000 1362 1600 1507 3431;3432;3433;3434 3188;3189;3190;3191;3192 3191 2939;6680 5 EMFEDTVEER ________________ FEDTVEERVINEEYKI K E M E R V 0 1 0 1 0 0 4 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 10 0 1283.534 E9PC52;Q16576 E9PC52 5 14 RBBP7 Histone-binding protein RBBP7 yes no 2 0.0030962 96.331 By MS/MS By MS/MS 1 1 2470400 1254500 1216000 1363 761 1508 3435;3436 3193;3194 3193 2 EMFPYEASTPTGISASCR RVERDILKEMFPYEAS TGISASCRRPIKGAAG K E M C R R 2 1 0 0 1 0 2 1 0 1 0 0 1 1 2 3 2 0 1 0 0 0 18 0 2002.8765 G5E972;P42167;H0YJH7 G5E972 307 324 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2;3 1.1079E-05 91.932 By MS/MS By MS/MS 4 4 57064000 29444000 27619000 1364 990 1509;1510 3437;3438;3439;3440;3441;3442;3443;3444 3195;3196;3197;3198;3199;3200;3201 3199 115 1807;6498;7427 7 EMGTPLADTPTRPVTR VVVHPGKKEMGTPLAD TPTRPVTRHGGMRDLH K E M T R H 1 2 0 1 0 0 1 1 0 0 1 0 1 0 3 0 4 0 0 1 0 0 16 1 1740.8829 Q9BPU6 Q9BPU6 506 521 DPYSL5 Dihydropyrimidinase-related protein 5 yes yes 3 0.0011145 72.681 By MS/MS By MS/MS 1 1 14229000 7561700 6667800 1365 2566 1511 3445;3446 3202;3203 3203 7023 2 EMLWGSSTQLASDGSPK DLNPPSVREMLWGSST LASDGSPKGSSPESYI R E M P K G 1 0 0 1 0 1 1 2 0 0 2 1 1 0 1 4 1 1 0 0 0 0 17 0 1792.8302 A6NIW2;Q5JSL3;A0A0J9YW64 A6NIW2 426 442 DOCK11 Dedicator of cytokinesis protein 11 yes no 2 0.0017817 70.96 By MS/MS By MS/MS 1 1 6990400 2764100 4226300 1366 418 1512 3447;3448 3204;3205;3206 3206 43 784 3 EMSMDESKQVETK ETKKLMQREMSMDESK ESKQVETKTDAKNGEE R E M T K T 0 0 0 1 0 1 3 0 0 0 0 2 2 0 0 2 1 0 0 1 0 0 13 1 1540.6749 Q9BV00;P29536 Q9BV00 55 67 LMOD1 Leiomodin-1 yes no 2 0.01291 58.268 By MS/MS By matching 1 1 5852600 2726000 3126600 1367 1647 1513 3449;3450 3207 3207 3041 0 EMVQAIAPINYPQMTTLNSTSSTTTPTSRMR KQIVKHDREMVQAIAP TTPTSRMRTQSPPVYT R E M M R T 2 2 2 0 0 2 1 0 0 2 1 0 3 0 3 4 7 0 1 1 0 0 31 1 3426.6582 O60741 O60741 631 661 HCN1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 yes yes 3 0.020146 45.07 By MS/MS 1 0 0 0 1368 1418 1514 3451 3208 3208 2606;2607;7530 1 ENASPAPGTTAEEAMSR RASPEPQRENASPAPG TAEEAMSRGPPPAPEG R E N S R G 4 1 1 0 0 0 3 1 0 0 0 0 1 0 2 2 2 0 0 0 0 0 17 0 1717.7577 A0A024RCR6;A0A0G2JK23;P46379;A0A0G2JL47;H0Y710 A0A024RCR6 964 980 BAT3;BAG6 Large proline-rich protein BAG6 yes no 2 1.8196E-05 103.67 By MS/MS By MS/MS 2 2 49185000 24999000 24186000 1369 4 1515;1516 3452;3453;3454;3455 3209;3210;3211 3211 0 6 3 ENATPTRNTISK ISLMEKVKENATPTRN PTRNTISKVTSNLRIR K E N S K V 1 1 2 0 0 0 1 0 0 1 0 1 0 0 1 1 3 0 0 0 0 0 12 1 1330.6841 A0A0G2JNU3;A6H8Y1;H7C5U4;H0YCV8 A0A0G2JNU3 2078 2089 BDP1 Transcription factor TFIIIB component B homolog yes no 3 0.021771 50.149 By MS/MS By matching 1 1 8901600 3417600 5484000 1370 328 1517 3456;3457 3212 3212 0 ENDYESISDLQQGR GHHGLVPKENDYESIS ISDLQQGRDITRL___ K E N G R D 0 1 1 2 0 2 2 1 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1652.7278 Q9NWQ8 Q9NWQ8 414 427 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 7.5201E-21 158.42 By MS/MS By MS/MS 1 1 44956000 26797000 18160000 1371 2746 1518 3458;3459 3213;3214 3214 7908 2 ENEPLSTKTIDTTAEQTSFR KAEAEWFKENEPLSTK TAEQTSFRILEAKKGD K E N F R I 1 1 1 1 0 1 3 0 0 1 1 1 0 1 1 2 5 0 0 0 0 0 20 1 2267.0917 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42 A0A0A0MRA3 6731 6750 TTN Titin yes no 2 0.029472 48.527 By matching By MS/MS 1 1 14886000 8677900 6208500 1372 173 1519 3460;3461 3215 3215 1 ENFSPER QPRPSANRENFSPERF RENFSPERFLPLNIRN R E N E R F 0 1 1 0 0 0 2 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 7 0 877.393 Q7Z6E9;H3BSK8 Q7Z6E9 858 864 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2 0.025675 78.556 By MS/MS By matching 1 1 14858000 7376600 7481200 1373 2224 1520 3462;3463 3216 3216 1 ENIKPNETSPSFSK QNSPAGNKENIKPNET ETSPSFSKAENKGISP K E N S K A 0 0 2 0 0 0 2 0 0 1 0 2 0 1 2 3 1 0 0 0 0 0 14 1 1576.7733 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700;F8W0B5 H0YH87 685 698 ATXN2 Ataxin-2 no no 2 0.030617 71.531 By MS/MS By matching 1 1 13510000 7204500 6305300 1374 912;929 1521 3464;3465 3217 3217 1 ENLAESSKPTAGGSRSQK LSPLSLGKENLAESSK AGGSRSQKVKVAQRSP K E N Q K V 2 1 1 0 0 1 2 2 0 0 1 2 0 0 1 4 1 0 0 0 0 0 18 2 1845.9181 P49454 P49454 3126 3143 CENPF Centromere protein F yes yes 3 0.027255 50.178 By MS/MS By matching 1 1 5232600 2693900 2538800 1375 1724 1522 3466;3467 3218 3218 1 ENPKQKGLMTIYEDEMK PSFSNWPKENPKQKGL TIYEDEMKQEIGSRSS K E N M K Q 0 0 1 1 0 1 3 1 0 1 1 3 2 0 1 0 1 0 1 0 0 0 17 2 2052.986 Q70EK8 Q70EK8 631 647 USP53 Inactive ubiquitin carboxyl-terminal hydrolase 53 yes yes 2 0.00053007 68.173 By matching By MS/MS 1 1 35228000 16873000 18355000 1376 2190 1523 3468;3469 3219 3219 295;296 6924 1 ENPPVEDSSDEDDKR YLGDDMKRENPPVEDS SSDEDDKRNQGNLYDK R E N K R N 0 1 1 4 0 0 3 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 15 1 1730.7231 Q8TCJ2 Q8TCJ2 491 505 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 3 0.027362 47.904 By MS/MS 1 0 0 0 1377 2377 1524 3470 3220 3220 1 ENRVLHYWTMRK ILNELFQRENRVLHYW LHYWTMRKRRLDQCQQ R E N R K R 0 2 1 0 0 0 1 0 1 0 1 1 1 0 0 0 1 1 1 1 0 0 12 2 1631.8355 E7EWP2;E7EPJ7;O75962;F5H228 E7EWP2 1061 1072 TRIO Triple functional domain protein yes no 2 0.019602 54.982 By MS/MS 1 17939000 17939000 0 1378 713 1525 3471 3221 3221 7354 1 ENSFGSPLEFR ELSNSPLRENSFGSPL FGSPLEFRNSGPLGTE R E N F R N 0 1 1 0 0 0 2 1 0 0 1 0 0 2 1 2 0 0 0 0 0 0 11 0 1281.599 Q9UQ35 Q9UQ35 1324 1334 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.02248 61.167 By matching By MS/MS 1 1 18550000 9918300 8632000 1379 2877 1526 3472;3473 3222 3222 5948 1 ENSPSSQSAGLSSINK EQRNTRNRENSPSSQS AGLSSINKEGEEPTKG R E N N K E 1 0 2 0 0 1 1 1 0 1 1 1 0 0 1 6 0 0 0 0 0 0 16 0 1604.7642 Q9H2Y7;A0A0C4DGM5 Q9H2Y7 1277 1292 ZNF106 Zinc finger protein 106 yes no 2 0.0071002 62.162 By MS/MS By MS/MS 1 1 6492600 3094400 3398200 1380 2649 1527 3474;3475 3223;3224 3223 5401 2 ENTLFDIHRSPAR VPAHQKKRENTLFDIH DIHRSPARRSHIRRKK R E N A R R 1 2 1 1 0 0 1 0 1 1 1 0 0 1 1 1 1 0 0 0 0 0 13 1 1554.7903 Q9ULI0;C9JG15 Q9ULI0 309 321 ATAD2B ATPase family AAA domain-containing protein 2B yes no 3 0.021025 49.934 By matching By MS/MS 1 1 4244900 2005900 2239000 1381 2846 1528 3476;3477 3225 3225 5853 1 ENVEYIEREESDGEYDEFGR YGGGFNERENVEYIER GEYDEFGRKKKKYRGK R E N G R K 0 2 1 2 0 0 7 2 0 1 0 0 0 1 0 1 0 0 2 1 0 0 20 1 2464.0303 O95218 O95218 110 129 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2;3 6.3673E-08 90.689 By MS/MS By MS/MS 2 2 632030000 369520000 262510000 1382 1477 1529 3478;3479;3480;3481 3226;3227;3228;3229 3227 2731;7540 4 ENVEYIEREESDGEYDEFGRK YGGGFNERENVEYIER EYDEFGRKKKKYRGKA R E N R K K 0 2 1 2 0 0 7 2 0 1 0 1 0 1 0 1 0 0 2 1 0 0 21 2 2592.1252 O95218 O95218 110 130 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3;4 4.1064E-10 103.75 By MS/MS By MS/MS 2 2 131720000 72197000 59525000 1383 1477 1530 3482;3483;3484;3485 3230;3231;3232 3232 2731;7540 3 ENVLLSSELQRQEK TECHSLKRENVLLSSE SELQRQEKELHNSQKQ R E N E K E 0 1 1 0 0 2 3 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 14 1 1671.8792 Q14BN4;H7BZW9;B7Z863;B7Z964;H7C3M8;H7BZK0 Q14BN4 679 692 SLMAP Sarcolemmal membrane-associated protein yes no 2 0.01209 56.404 By matching By MS/MS 1 1 2971400 1769600 1201800 1384 1963 1531 3486;3487 3233 3233 3815;3816 0 ENVSDLTLGPGNSPITR HVDSSSGRENVSDLTL PGNSPITRMNPASGAL R E N T R M 0 1 2 1 0 0 1 2 0 1 2 0 0 0 2 2 2 0 0 1 0 0 17 0 1768.8955 Q6DCA0 Q6DCA0 62 78 AMMECR1L AMMECR1-like protein yes yes 2 6.7398E-16 129.89 By MS/MS By MS/MS 1 1 34129000 16431000 17699000 1385 2139 1532 3488;3489 3234;3235 3234 4254;6898 2 EPAITSQNSPEAR KDLDEKKKEPAITSQN SQNSPEAREESTSSGN K E P A R E 2 1 1 0 0 1 2 0 0 1 0 0 0 0 2 2 1 0 0 0 0 0 13 0 1398.6739 P23193;E5RIS7 P23193 92 104 TCEA1 Transcription elongation factor A protein 1 yes no 2 0.00012514 115.06 By MS/MS By MS/MS 1 1 27739000 13654000 14085000 1386 1619 1533 3490;3491 3236;3237;3238;3239 3238 2996;2997;6684 4 EPALPLEPDSGGNTSPGVTANGEAR VELLLTPREPALPLEP VTANGEARTFNGSIEL R E P A R T 3 1 2 1 0 0 3 4 0 0 2 0 0 0 4 2 2 0 0 1 0 0 25 0 2435.1565 V9GYM8;Q92974;Q5VY93 V9GYM8 727 751 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.023392 45.723 By matching By MS/MS 1 1 7696100 4055700 3640400 1387 2450 1534 3492;3493 3240 3240 1 EPEAASSRGSPVR KRERDREREPEAASSR SSRGSPVRVKREFEPA R E P V R V 2 2 0 0 0 0 2 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 13 1 1341.6637 F8WC91;B9A018;Q53GS9 F8WC91 37 49 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 2 0.0049886 77.204 By MS/MS By matching 1 1 5322700 2375500 2947200 1388 536 1535 3494;3495 3241 3241 974 1 EPEELDQLYLDDVNEIIR PIPVTVKREPEELDQL DDVNEIIRNDLSSTST R E P I R N 0 1 1 3 0 1 4 0 0 2 3 0 0 0 1 0 0 0 1 1 0 0 18 0 2202.0692 O95644;F5H4S8 O95644 916 933 NFATC1 Nuclear factor of activated T-cells, cytoplasmic 1 yes no 4 0.021595 37.182 By MS/MS By matching 1 1 78869000 34189000 44680000 1389 1493 1536 3496;3497 3242 3242 1 EPESPPASAPIPLFGADTIGQR PARSRRRREPESPPAS GADTIGQRSPDGPVLS R E P Q R S 3 1 0 1 0 1 2 2 0 2 1 0 0 1 5 2 1 0 0 0 0 0 22 0 2249.1328 Q96AY4 Q96AY4 25 46 TTC28 Tetratricopeptide repeat protein 28 yes yes 3 7.7415E-12 110.89 By MS/MS By MS/MS 1 1 6543000 0 6543000 1390 2459 1537 3498;3499 3243;3244 3244 4950;4951 2 EPGRPTPTYHLVPNTSQSQVEEDVSSPPQR ________________ DVSSPPQRSSETMQLK R E P Q R S 0 2 1 1 0 3 3 1 1 0 1 0 0 0 6 4 3 0 1 3 0 0 30 1 3331.6069 H3BSB6;H3BPV6;H3BUR2;H3BUA4;H3BNF5;E7EPZ8;Q92536 H3BSB6 5 34 SLC7A6 Y+L amino acid transporter 2 yes no 4 0.00064535 51.104 By MS/MS By MS/MS 1 1 12728000 6370200 6357900 1391 719 1538 3500;3501 3245;3246 3245 7360 2 EPLDIEDPSSR E P S R 0 1 0 2 0 0 2 0 0 1 1 0 0 0 2 2 0 0 0 0 0 0 11 0 1256.5885 REV__A0A0A0MRH6 yes no 2 0.010348 65.842 By matching By MS/MS 1 2 31979000 9071200 22907000 + 1392 2960 1539 3502;3503;3504 3247 3247 6145;6146 1 EPLIPASPKAEPIWELPTR RSLAPEPKEPLIPASP PIWELPTRAPRLSIGD K E P T R A 2 1 0 0 0 0 3 0 0 2 2 1 0 0 5 1 1 1 0 0 0 0 19 1 2143.1677 Q9Y613 Q9Y613 517 535 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 3 0.00037317 73.953 By MS/MS By MS/MS 1 1 7966300 5150400 2815900 1393 2943 1540 3505;3506 3248;3249 3249 6109 2 EPLLSSSENGNGGR VSERKNTREPLLSSSE SENGNGGRETSPADAR R E P G R E 0 1 2 0 0 0 2 3 0 0 2 0 0 0 1 3 0 0 0 0 0 0 14 0 1415.6641 M0R2C7;M0QYC1;M0QZR4;Q92888 M0R2C7 208 221 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes no 2 0.0021896 80.746 By matching By MS/MS 1 1 8206300 4153200 4053100 1394 1302 1541 3507;3508 3250 3250 2339 1 EPLSSETQYSVDTR HNIDHAQREPLSSETQ TQYSVDTRRPAPQKAL R E P T R R 0 1 0 1 0 1 2 0 0 0 1 0 0 0 1 3 2 0 1 1 0 0 14 0 1610.7424 A6PW57;Q99755;A2A3N6 A6PW57 326 339 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 2 0.00046431 94.82 By MS/MS By MS/MS 1 1 20250000 9708100 10542000 1395 427 1542 3509;3510 3251;3252 3251 808;7264 2 EPPLYYGVCPVYEDVPAR RAGATASKEPPLYYGV VYEDVPARNERIYVYE K E P A R N 1 1 0 1 1 0 2 1 0 0 1 0 0 0 4 0 0 0 3 3 0 0 18 0 2123.0034 Q86XL3 Q86XL3 195 212 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.024151 40.856 By MS/MS 1 1084600 0 1084600 1396 2252 1543 3511 3253 3253 7779 1 EPQEKEDADGER THPPGPVKEPQEKEDA KEDADGERADSTYGSS K E P E R A 1 1 0 2 0 1 4 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 12 1 1401.6008 H3BNC2;Q7LC14;O00221 H3BNC2 57 68 NFKBIE NF-kappa-B inhibitor epsilon yes no 2 0.023124 57.55 By MS/MS 1 1999500 0 1999500 1397 1117 1544 3512 3254 3254 0 EPQVNQQQLQQLMDMGFTR QEEGGSRREPQVNQQQ LMDMGFTREHAMEALL R E P T R E 0 1 1 1 0 6 1 1 0 0 2 0 2 1 1 0 1 0 0 1 0 0 19 0 2290.0834 Q7Z6Z7 Q7Z6Z7 1314 1332 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.023177 44.953 By MS/MS 1 36006000 36006000 0 1398 2226 1545 3513 3255 3255 1 EPTNEELNR LSRAELYKEPTNEELN PTNEELNRLRETEILF K E P N R L 0 1 2 0 0 0 3 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 9 0 1100.5098 A0A0A0MRW6;Q9H6R4 A0A0A0MRW6 63 71 NOL6 Nucleolar protein 6 yes no 1 0.01749 45.081 By matching By MS/MS 1 1 38353000 22753000 15599000 1399 202 1546 3514;3515 3256 3256 1 EPTPSIASDISLPIATQELR SPGHISVKEPTPSIAS PIATQELRQRLRQLEN K E P L R Q 2 1 0 1 0 1 2 0 0 3 2 0 0 0 3 3 2 0 0 0 0 0 20 0 2137.1267 H7BXI1;A0A087WXU3;A0FGR8 H7BXI1 714 733 ESYT2 Extended synaptotagmin-2 yes no 2 3.8844E-05 78.674 By MS/MS By matching 1 1 13753000 8535000 5218100 1400 89 1547 3516;3517 3257 3257 164;165 1 EPYPGSAEVIR NPTRAGGREPYPGSAE PGSAEVIRESSSTTGM R E P I R E 1 1 0 0 0 0 2 1 0 1 0 0 0 0 2 1 0 0 1 1 0 0 11 0 1216.6088 H0Y568;H7BYC7;A0A1B0GTL0;Q08AH0;A0A0D9SEM5;E7ETA5;A0A0R4J2G7;A0A0D9SEP4;A0A1D5RMU6;E7ERL8;P58400;Q9ULB1 H0Y568 47 57 NRXN1 Neurexin-1-beta;Neurexin-1 yes no 2 0.017996 50.805 By MS/MS 1 0 0 0 1401 307 1548 3518 3258 3258 556;7224 1 EQAFYNMLR PPDTPSLREQAFYNML QAFYNMLRRQEELENG R E Q L R R 1 1 1 0 0 1 1 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 9 0 1170.5492 H3BMG9;H3BSV5;A0A0A0MTL6;Q6ZS17 H3BMG9 319 327 FAM65A Protein FAM65A yes no 2 0.0022801 98.629 By MS/MS By MS/MS 1 1 4450400 2419100 2031300 1402 249 1549 3519;3520 3259;3260 3260 7213 2 EQAPDISPK VIYSNLTREQAPDISP QAPDISPKSDTLTDSQ R E Q P K S 1 0 0 1 0 1 1 0 0 1 0 1 0 0 2 1 0 0 0 0 0 0 9 0 983.49238 Q7Z333 Q7Z333 941 949 SETX Probable helicase senataxin yes yes 2 0.0046508 101.38 By MS/MS By MS/MS 1 1 4198300 2033500 2164800 1403 2209 1550 3521;3522 3261;3262;3263 3261 4405 3 EQDLPLAEAVRPKTPPVVIK KEEKSNGREQDLPLAE KTPPVVIKSQLKTQED R E Q I K S 2 1 0 1 0 1 2 0 0 1 2 2 0 0 4 0 1 0 0 3 0 0 20 2 2199.2627 Q96A49 Q96A49 235 254 SYAP1 Synapse-associated protein 1 yes yes 3 0.0044057 72.489 By matching By MS/MS 1 1 20919000 9803000 11116000 1404 2454 1551 3523;3524 3264 3264 6992 1 EQEMTEMR FRKMLDAKEQEMTEMR EQEMTEMRDVMQQQLA K E Q M R D 0 1 0 0 0 1 3 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 8 0 1052.4267 Q03252 Q03252 357 364 LMNB2 Lamin-B2 yes yes 1 0.027055 42.914 By MS/MS 1 85659000 0 85659000 1405 1847 1552 3525 3265 3265 0 EQIALLVKDMSP QEGERQLREQIALLVK LLVKDMSP________ R E Q S P - 1 0 0 1 0 1 1 0 0 1 2 1 1 0 1 1 0 0 0 1 0 0 12 1 1342.7166 P30307 P30307 462 473 CDC25C M-phase inducer phosphatase 3 yes yes 2 0.019382 64.104 By MS/MS 1 650530 0 650530 1406 1654 1553 3526 3266 3266 3055 1 EQISDIDDAVR PEQWSQLKEQISDIDD SDIDDAVRKL______ K E Q V R K 1 1 0 3 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1259.5994 P53999 P53999 115 125 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 2 0.001914 101.66 By matching By MS/MS 1 1 4939000 2843300 2095700 1407 1765 1554 3527;3528 3267 3267 1 EQLVDQGIMPPLKSPAAFHEQIK RLQQRRTREQLVDQGI AAFHEQIKSLERARTE R E Q I K S 2 0 0 1 0 3 2 1 1 2 2 2 1 1 3 1 0 0 0 1 0 0 23 1 2575.3468 Q9ULH7;I3L2S3 Q9ULH7 53 75 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator yes no 3 0.0042136 50.884 By MS/MS By MS/MS 1 1 16169000 9849700 6319600 1408 2845 1555 3529;3530 3268;3269 3269 5849 2 EQMIDLQNLLTTQSPSVK APKEKKKKEQMIDLQN TTQSPSVKSLAVPTIE K E Q V K S 0 0 1 1 0 3 1 0 0 1 3 1 1 0 1 2 2 0 0 1 0 0 18 0 2044.0511 Q9BVJ6 Q9BVJ6 556 573 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 3 0.0068508 56.746 By MS/MS 1 1968500 1968500 0 1409 2586 1556 3531 3270 3270 346 5229 1 EQMMNSSISSGSGSLR EAKIHDLREQMMNSSI SSGSGSLRTSQKRSLY R E Q L R T 0 1 1 0 0 1 1 2 0 1 1 0 2 0 0 6 0 0 0 0 0 0 16 0 1669.74 E7EQD7;A0A0C4DFT3;Q12959 E7EQD7 562 577 DLG1 Disks large homolog 1 yes no 2 1.527E-09 121.82 By MS/MS By MS/MS 2 2 19770000 11792000 7978000 1410 268 1557 3532;3533;3534;3535 3271;3272;3273;3274 3274 485;486;487 4 EQNECVALLDKAATAQNIMNPK PLDAAASREQNECVAL AQNIMNPKKVTRLKEQ R E Q P K K 4 0 3 1 1 2 2 0 0 1 2 2 1 0 1 0 1 0 0 1 0 0 22 1 2457.1992 Q8N8V4 Q8N8V4 109 130 ANKS4B Ankyrin repeat and SAM domain-containing protein 4B yes yes 3 0.010235 41.53 By MS/MS By matching 1 1 2766800 2019100 747760 1411 2326 1558 3536;3537 3275 3275 312 1 EQPGEEYSEEEESVLK ASMEQLLREQPGEEYS EEEESVLKNSDVEPTA R E Q L K N 0 0 0 0 0 1 7 1 0 0 1 1 0 0 1 2 0 0 1 1 0 0 16 0 1880.8163 Q96PY6 Q96PY6 1119 1134 NEK1 Serine/threonine-protein kinase Nek1 yes yes 2 0.0020937 66.538 By MS/MS By matching 1 1 12975000 7429800 5545100 1412 2526 1559 3538;3539 3276 3276 7851 1 EQSEVSVSPR SPDRDKKKEQSEVSVS SEVSVSPRASKHHYSR K E Q P R A 0 1 0 0 0 1 2 0 0 0 0 0 0 0 1 3 0 0 0 2 0 0 10 0 1116.5411 Q7L4I2;E9PI52 Q7L4I2 25 34 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 2 2.135E-05 131.69 By MS/MS By MS/MS 1 1 56939000 30745000 26194000 1413 2200 1560 3540;3541 3277;3278;3279 3277 4381 3 EQSSDLTPSGDVSPVKPLSR KMKDNEEREQSSDLTP SPVKPLSRSAELEFPL R E Q S R S 0 1 0 2 0 1 1 1 0 0 2 1 0 0 3 5 1 0 0 2 0 0 20 1 2098.0542 Q8WYQ5 Q8WYQ5 365 384 DGCR8 Microprocessor complex subunit DGCR8 yes yes 2;3 0.00082503 68.82 By MS/MS By MS/MS 2 2 30143000 15982000 14162000 1414 2418 1561 3542;3543;3544;3545 3280;3281;3282;3283 3282 4857;4858;4859 4 EQTLQGAEEDEDLEGPPSYKPPTPK LICRQQRKEQTLQGAE SYKPPTPKAKLEAQEM K E Q P K A 1 0 0 2 0 2 5 2 0 0 2 2 0 0 5 1 2 0 1 0 0 0 25 1 2754.2872 Q92692 Q92692 388 412 PVRL2 Nectin-2 yes yes 3 0.010024 47.281 By matching By MS/MS 1 1 12225000 6836900 5388200 1415 2433 1562 3546;3547 3284 3284 6985 1 EQTLSPTITSGLHNIAR EFLYDKLREQTLSPTI SGLHNIARSIETRNYS R E Q A R S 1 1 1 0 0 1 1 1 1 2 2 0 0 0 1 2 3 0 0 0 0 0 17 0 1836.9694 H7BXG7;D6REX3;O94979;H0Y8W8 H7BXG7 908 924 SEC31A Protein transport protein Sec31A yes no 2;3 2.7221E-05 93.909 By MS/MS By MS/MS 2 2 21820000 11483000 10337000 1416 675 1563 3548;3549;3550;3551 3285;3286;3287 3287 1202;6396 3 EQVANSAFVER YYITGESKEQVANSAF ANSAFVERVRKRGFEV K E Q E R V 2 1 1 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1248.6099 P08238;Q58FF7 P08238 492 502 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.00011833 117.7 By MS/MS By MS/MS 1 1 10812000 4949400 5862200 1417 1542 1564 3552;3553 3288;3289 3289 2 EQVYDAMGEKEEAK EEAREELREQVYDAMG MGEKEEAKKTEDKSLA R E Q A K K 2 0 0 1 0 1 4 1 0 0 0 2 1 0 0 0 0 0 1 1 0 0 14 1 1625.7243 P49321;E9PNB5;E9PPR5 P49321 145 158 NASP Nuclear autoantigenic sperm protein yes no 2 0.0029717 73.082 By MS/MS By MS/MS 1 1 5516200 2657900 2858300 1418 1723 1565 3554;3555 3290;3291 3290 7627 2 EQYGLGPYEAVTPLTK LEQGNRLREQYGLGPY EAVTPLTKAADISLDN R E Q T K A 1 0 0 0 0 1 2 2 0 0 2 1 0 0 2 0 2 0 2 1 0 0 16 0 1764.8934 Q12888;A6NNK5;H7BZY0 Q12888 1598 1613 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.00077709 95.409 By MS/MS By MS/MS 1 1 8608400 4436800 4171600 1419 1882 1566 3556;3557 3292;3293 3292 6779 2 EQYVPPRSPK GVTRRNGKEQYVPPRS YVPPRSPK________ K E Q P K - 0 1 0 0 0 1 1 0 0 0 0 1 0 0 3 1 0 0 1 1 0 0 10 1 1199.6299 Q71RC2;X6RLN4 Q71RC2 715 724 LARP4 La-related protein 4 yes no 2 6.2342E-06 150.14 By MS/MS By MS/MS 1 1 34845000 16967000 17878000 1420 2193 1567 3558;3559 3294;3295 3295 4368 2 ERALSPGLEESGLGLLAR GGYRLGARERALSPGL SGLGLLARFAASALPS R E R A R F 2 2 0 0 0 0 3 3 0 0 5 0 0 0 1 2 0 0 0 0 0 0 18 1 1867.0163 H9KVB4;O15417 H9KVB4 1853 1870 TNRC18 Trinucleotide repeat-containing gene 18 protein yes no 3 3.2759E-07 109.56 By MS/MS By MS/MS 1 1 4560200 2186500 2373800 1421 1192 1568 3560;3561 3296;3297 3296 2160 2 ERASDVDHMVR EFFEHIERERASDVDH SDVDHMVRWYLAIGPL R E R V R W 1 2 0 2 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 2 0 0 11 1 1313.6146 A0A087WV07;A0A1C7CYW8;Q8IVF4 A0A087WV07 695 705 DNAH10 Dynein heavy chain 10, axonemal yes no 2 0.03076 48.602 By MS/MS 1 0 0 0 1422 54 1569 3562 3298 3298 1 ERDHSPTPSVFNSDEER ERTRERERERDHSPTP VFNSDEERYRYREYAE R E R E R Y 0 2 1 2 0 0 3 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 17 1 2000.8824 Q6UN15 Q6UN15 488 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 3 0.015093 51.39 By matching By MS/MS 1 1 9268400 4904400 4364000 1423 2168 1570 3563;3564 3299 3299 4325;4326;4327;6918 1 ERDHSPTPSVFNSDEERYR ERTRERERERDHSPTP NSDEERYRYREYAERG R E R Y R Y 0 3 1 2 0 0 3 0 1 0 0 0 0 1 2 3 1 0 1 1 0 0 19 2 2320.0469 Q6UN15 Q6UN15 488 506 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 3;4 0.0063695 48.711 By matching By MS/MS 2 2 59319000 22285000 37034000 1424 2168 1571;1572 3565;3566;3567;3568 3300;3301;3302 3300 4325;4326;4327;6918 3 ERDTSPDKGELVSDEEEDT AIREDFLRERDTSPDK VSDEEEDT________ R E R D T - 0 1 0 4 0 0 5 1 0 0 1 1 0 0 1 2 2 0 0 1 0 0 19 2 2149.9135 Q9UPU7 Q9UPU7 945 963 TBC1D2B TBC1 domain family member 2B yes yes 3 3.6903E-05 82.774 By MS/MS By MS/MS 1 1 36278000 18578000 17701000 1425 2872 1573 3569;3570 3303;3304 3304 5934 2 ERDYAEIQDFHR EFRERQARERDYAEIQ AEIQDFHRTFGCDDEL R E R H R T 1 2 0 2 0 1 2 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 12 1 1577.7223 Q5VWV2;Q8TEW0 Q5VWV2 1017 1028 PARD3 Partitioning defective 3 homolog yes no 3 1.4232E-27 175.48 By MS/MS By MS/MS 1 1 20121000 10022000 10099000 1426 2121 1574 3571;3572 3305;3306 3305 7750 2 ERDYPFYER PLPRDLERERDYPFYE RDYPFYERVRPAYSLE R E R E R V 0 2 0 1 0 0 2 0 0 0 0 0 0 1 1 0 0 0 2 0 0 0 9 1 1273.5728 A0A087WWP4;Q96T37 A0A087WWP4 286 294 RBM15 Putative RNA-binding protein 15 yes no 2 0.0030115 108.43 By MS/MS By MS/MS 1 1 5457100 2521600 2935500 1427 81 1575 3573;3574 3307;3308;3309 3309 7163 3 EREAANEAGDSSQDEAEDDVK DKADAKHREREAANEA DEAEDDVKQITVRFSR R E R V K Q 4 1 1 4 0 1 5 1 0 0 0 1 0 0 0 2 0 0 0 1 0 0 21 1 2263.9313 A0A0C4DH01;Q9NVU0 A0A0C4DH01 115 135 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes no 3 0.0018508 59.359 By MS/MS 1 2403300 2403300 0 1428 303 1576 3575 3310 3310 547;548 1 ERECSPSSPLPPLPEDEEGSEVTNSK MRNSPSVRERECSPSS GSEVTNSKSRDVYKLP R E R S K S 0 1 1 1 1 0 6 1 0 0 2 1 0 0 5 5 1 0 0 1 0 0 26 1 2869.2924 Q96GY3 Q96GY3 131 156 LIN37 Protein lin-37 homolog yes yes 3 0.017944 44.969 By MS/MS 1 11885000 11885000 0 1429 2495 1577 3576 3311 3311 5022;5023 1 EREESEDELEEANGNNPIDIEVDQNK RHARKQKREREESEDE DIEVDQNKESKKEVPP R E R N K E 1 1 4 3 0 1 8 1 0 2 1 1 0 0 1 1 0 0 0 1 0 0 26 1 3014.3225 Q9UKL0 Q9UKL0 256 281 RCOR1 REST corepressor 1 yes yes 3 7.4523E-18 98.015 By MS/MS By MS/MS 2 2 80627000 45058000 35569000 1430 2832 1578;1579 3577;3578;3579;3580 3312;3313;3314 3313 5831 3 ERESPPPSALQPVQLPR EGGCPRPKERESPPPS LQPVQLPRLALSPPPP K E R P R L 1 2 0 0 0 2 2 0 0 0 2 0 0 0 5 2 0 0 0 1 0 0 17 1 1900.0167 Q86VE0 Q86VE0 199 215 MYPOP Myb-related transcription factor, partner of profilin yes yes 3 0.0030157 61.649 By MS/MS 1 2838400 0 2838400 1431 2243 1580 3581 3315 3315 4486 1 ERESSANNSVSPSESLR NHHELDHRERESSANN VSPSESLRASEKHRGS R E R L R A 1 2 2 0 0 0 3 0 0 0 1 0 0 0 1 6 0 0 0 1 0 0 17 1 1847.8609 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726 H0YKH0 193 209 TLE3 Transducin-like enhancer protein 3 yes no 3 0.00049958 74.444 By MS/MS By MS/MS 1 1 31957000 20461000 11496000 1432 897 1581 3582;3583 3316;3317 3316 1609 2 ERFSPPR RDYDRNRRERFSPPRH RERFSPPRHELSPPQK R E R P R H 0 2 0 0 0 0 1 0 0 0 0 0 0 1 2 1 0 0 0 0 0 0 7 1 887.46135 Q9BXP5;C9JUL9 Q9BXP5 64 70 SRRT Serrate RNA effector molecule homolog yes no 2 0.022297 92.239 By matching By MS/MS 1 1 30314000 13846000 16468000 1433 2599 1582 3584;3585 3318 3318 1 ERGSDASGQLFHGR PFSGTSLRERGSDASG SGQLFHGRAREGSFES R E R G R A 1 2 0 1 0 1 1 3 1 0 1 0 0 1 0 2 0 0 0 0 0 0 14 1 1515.7179 P19174;V9GY71;V9GYH5 P19174 1230 1243 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 3 1.1635E-14 144.08 By MS/MS By MS/MS 1 1 8589000 4406200 4182900 1434 1603 1583 3586;3587 3319;3320 3319 2958 2 ERGTPPVDPK RHAPAMLRERGTPPVD GTPPVDPKLAWVGDVF R E R P K L 0 1 0 1 0 0 1 1 0 0 0 1 0 0 3 0 1 0 0 1 0 0 10 1 1094.572 P48634 P48634 779 788 PRRC2A Protein PRRC2A yes yes 2 0.0011609 114.71 By MS/MS By MS/MS 2 1 20987000 13848000 7138200 1435 1718 1584 3588;3589;3590 3321;3322;3323 3323 6712 3 ERHPSWRSEETQER PKLERRPRERHPSWRS RSEETQERERSRTGSE R E R E R E 0 3 0 0 0 1 4 0 1 0 0 0 0 0 1 2 1 1 0 0 0 0 14 2 1825.8456 E7EX17;P23588 E7EX17 402 415 EIF4B Eukaryotic translation initiation factor 4B yes no 4 0.0057634 56.139 By MS/MS 1 19229000 0 19229000 1436 750 1585 3591 3324 3324 1364 1 ERIQQFDDGGSDEEDIWEEK ALFEACCKERIQQFDD EEDIWEEKHIAFTPES K E R E K H 0 1 0 4 0 2 5 2 0 2 0 1 0 1 0 1 0 1 0 0 0 0 20 1 2424.0353 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 314 333 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 2;3 9.6338E-09 94.313 By MS/MS By MS/MS 2 2 29092000 15506000 13586000 1437 814 1586 3592;3593;3594;3595 3325;3326;3327 3325 1458 3 ERLDGENIYIR TEAWKKKRERLDGENI DGENIYIRHSNLMLED R E R I R H 0 2 1 1 0 0 2 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 11 1 1376.7048 Q4VB86;P11171 Q4VB86 410 420 EPB41 Protein 4.1 yes no 2;3 1.7589E-85 221.5 By MS/MS By MS/MS 2 2 391290000 247640000 143650000 1438 1561 1587 3596;3597;3598;3599 3328;3329;3330;3331;3332;3333 3330 7560 6 ERLGSFGSITR VFGDFLGRERLGSFGS GSFGSITRQQEGEASS R E R T R Q 0 2 0 0 0 0 1 2 0 1 1 0 0 1 0 2 1 0 0 0 0 0 11 1 1221.6466 Q14315 Q14315 2229 2239 FLNC Filamin-C yes yes 2 0.005608 78.964 By matching By MS/MS 1 1 13062000 6937700 6124400 1439 1947 1588 3600;3601 3334 3334 3757 1 ERLSTLPDK DNDYNALRERLSTLPD RLSTLPDKLSYNIMVP R E R D K L 0 1 0 1 0 0 1 0 0 0 2 1 0 0 1 1 1 0 0 0 0 0 9 1 1057.5768 O94763 O94763 63 71 URI1 Unconventional prefoldin RPB5 interactor 1 yes yes 2 0.024284 66.056 By MS/MS 1 522020 0 522020 1440 1459 1589 3602 3335 3335 1 ERLYEWISIDKDEAGAK PTERLGTRERLYEWIS DKDEAGAKSKAPSVSR R E R A K S 2 1 0 2 0 0 3 1 0 2 1 2 0 0 0 1 0 1 1 0 0 0 17 2 2022.0058 A0A0A0MTP6;O15357 A0A0A0MTP6 817 833 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 3 0.00039304 73.597 By MS/MS By MS/MS 1 1 5883300 3820400 2062900 1441 250 1590 3603;3604 3336;3337 3337 7214 2 ERPISLGIFPLPAGDGLLTPDAQK TAHSRIRKERPISLGI LLTPDAQKGGETPGSE K E R Q K G 2 1 0 2 0 1 1 3 0 2 4 1 0 1 4 1 1 0 0 0 0 0 24 1 2504.3639 A0A087X2D8;O60271;D6RHI8 A0A087X2D8 199 222 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 3 2.7182E-33 129.82 By MS/MS By MS/MS 2 1 21932000 17218000 4713500 1442 148 1591;1592 3605;3606;3607 3338;3339;3340 3338 254;6258 3 ERPLQQVSPVASVPWR KEDAPQEKERPLQQVS PVASVPWRSHSFCKDR K E R W R S 1 2 0 0 0 2 1 0 0 0 1 0 0 0 3 2 0 1 0 3 0 0 16 1 1848.0006 Q9BY89 Q9BY89 1481 1496 KIAA1671 Uncharacterized protein KIAA1671 yes yes 3 0.0028694 63.488 By MS/MS By MS/MS 1 1 4965300 2413100 2552200 1443 2604 1593 3608;3609 3341;3342;3343 3341 5271 3 ERPSGPESPVQGPR DESVEAKRERPSGPES ESPVQGPRIKHVCRHA R E R P R I 0 2 0 0 0 1 2 2 0 0 0 0 0 0 4 2 0 0 0 1 0 0 14 1 1491.743 Q9UMN6 Q9UMN6 854 867 KMT2B Histone-lysine N-methyltransferase 2B yes yes 3 7.873E-06 119.04 By MS/MS 1 4318200 4318200 0 1444 2857 1594 3610 3344 3344 5883 1 ERPSSAIYPSDSFR LRSKTTIRERPSSAIY IYPSDSFRQSLLGSRR R E R F R Q 1 2 0 1 0 0 1 0 0 1 0 0 0 1 2 4 0 0 1 0 0 0 14 1 1610.7689 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 163 176 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2;3 1.7573E-20 158.29 By MS/MS By MS/MS 2 2 65827000 36845000 28982000 1445 2450 1595 3611;3612;3613;3614 3345;3346;3347 3345 4929;4930 3 ERPTPSLNNNCTTSEDSLVLYNR NETSAPFKERPTPSLN DSLVLYNRVAVQGDVV K E R N R V 0 2 4 1 1 0 2 0 0 0 3 0 0 0 2 3 3 0 1 1 0 0 23 1 2679.2559 P07814;V9GYZ6 P07814 734 756 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 3 0.021428 41.256 By matching By MS/MS 1 1 8271700 4514800 3757000 1446 1539 1596 3615;3616 3348 3348 1 ERRSGEQMVFFVCSN QSGQIPGRERRSGEQM MVFFVCSN________ R E R S N - 0 2 1 0 1 1 2 1 0 0 0 0 1 2 0 2 0 0 0 2 0 0 15 2 1844.8298 H0YMA0 H0YMA0 128 142 SNRPA1 yes yes 2 0.02019 56.936 By MS/MS 1 0 0 0 1447 1098 1597 3617 3349 3349 1 ERSDSGGSSSEPFDR HPSGLVPRERSDSGGS SSSEPFDRHAPAMLRE R E R D R H 0 2 0 2 0 0 2 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 15 1 1611.6761 P48634 P48634 757 771 PRRC2A Protein PRRC2A yes yes 2;3 9.9329E-05 110.04 By MS/MS By MS/MS 2 2 47248000 24386000 22862000 1448 1718 1598 3618;3619;3620;3621 3350;3351;3352;3353 3352 3204;3205 4 ERSDSGGSSSEPFDRHAPAMLR HPSGLVPRERSDSGGS RHAPAMLRERGTPPVD R E R L R E 2 3 0 2 0 0 2 2 1 0 1 0 1 1 2 5 0 0 0 0 0 0 22 2 2388.0877 P48634 P48634 757 778 PRRC2A Protein PRRC2A yes yes 4 0.010982 42.708 By matching By MS/MS 1 1 14129000 5029300 9099900 1449 1718 1599 3622;3623 3354 3354 3204;3205 1 ERSESLDPDSSMDTTLILK LTSASRIRERSESLDP MDTTLILKDTEAVMAF R E R L K D 0 1 0 3 0 0 2 0 0 1 3 1 1 0 1 4 2 0 0 0 0 0 19 1 2136.0256 H0Y2V6;Q5SW79 H0Y2V6 841 859 CEP170 Centrosomal protein of 170 kDa yes no 3 0.022724 43.932 By MS/MS 1 3001100 3001100 0 1450 1006 1600 3624 3355 3355 1835 1 ERSMSENAVR RAVGRLKRERSMSENA SMSENAVRQNGQLVRN R E R V R Q 1 2 1 0 0 0 2 0 0 0 0 0 1 0 0 2 0 0 0 1 0 0 10 1 1177.551 H7C433;A0A0A0MS29;C9JHF5;Q9GZY8 H7C433 10 19 MFF Mitochondrial fission factor yes no 2 0.025571 64.224 By matching By MS/MS 1 1 4900400 2806700 2093700 1451 207 1601 3625;3626 3356 3356 1 ERSPALKSPLQSVVVR AVSELSPRERSPALKS PLQSVVVRRRSPRPSP R E R V R R 1 2 0 0 0 1 1 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 16 2 1765.021 Q9Y2W1 Q9Y2W1 246 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0014742 74.742 By MS/MS By MS/MS 2 2 337360000 186050000 151310000 1452 2897 1602;1603 3627;3628;3629;3630 3357;3358;3359 3358 6032;6033 3 ERSPSPLR LLDTPRSRERSPSPLR ERSPSPLRGNVVPSPL R E R L R G 0 2 0 0 0 0 1 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 8 1 940.50903 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 28 35 CARHSP1 Calcium-regulated heat stable protein 1 yes no 2 1.1073E-08 122.18 By MS/MS 1 0 0 0 1453 1122 1604 3631 3360 3360 2048;2049 1 ERSPSPLRGNVVPSPLPTR LLDTPRSRERSPSPLR VPSPLPTRRTRTFSAT R E R T R R 0 3 1 0 0 0 1 1 0 0 2 0 0 0 5 3 1 0 0 2 0 0 19 2 2058.1334 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 28 46 CARHSP1 Calcium-regulated heat stable protein 1 yes no 3 0.0053579 60.949 By MS/MS By matching 1 1 88752000 47547000 41205000 1454 1122 1605 3632;3633 3361 3361 2048;2049 1 ERSPSPPTIQSK RKRRRMLRERSPSPPT SPPTIQSKRQTPSPRL R E R S K R 0 1 0 0 0 1 1 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 12 1 1325.6939 H7C3B5;Q14687;H0Y613 H7C3B5 26 37 GSE1 Genetic suppressor element 1 yes no 2 0.016251 81.278 By MS/MS 1 6823600 0 6823600 1455 1177 1606 3634 3362;3363;3364 3364 2136;2137 3 ERTSSLTQFPPSQSEER NYCPPVKRERTSSLTQ PPSQSEERSSGFRLKP R E R E R S 0 2 0 0 0 2 3 0 0 0 1 0 0 1 2 4 2 0 0 0 0 0 17 1 1977.9392 B7Z7F3;Q9H6Z4 B7Z7F3 54 70 RANBP3 Ran-binding protein 3 yes no 3 0.0058415 57.986 By MS/MS By matching 3 2 11935000 6621800 5313300 1456 515 1607 3635;3636;3637;3638;3639 3365;3366;3367 3365 954;955 3 ERVDDSTGTVISDVEEDAGELSR SPQKKKPRERVDDSTG EDAGELSRESMWDLSC R E R S R E 1 2 0 4 0 0 4 2 0 1 1 0 0 0 0 3 2 0 0 3 0 0 23 1 2478.1358 S4R403;Q9Y2D8 S4R403 297 319 SSX2IP Afadin- and alpha-actinin-binding protein yes no 3 0.0043648 50.536 By MS/MS By matching 1 1 30865000 20963000 9901600 1457 2886 1608 3640;3641 3368 3368 6019 1 ERVPDSPSPAPSLEEGR RVETSVIKERVPDSPS APSLEEGRRPGSHPSS K E R G R R 1 2 0 1 0 0 3 1 0 0 1 0 0 0 4 3 0 0 0 1 0 0 17 1 1821.8857 A0A087WZP2;Q9UI36 A0A087WZP2 486 502 DACH1 Dachshund homolog 1 yes no 3 0.00339 60.332 By MS/MS By matching 1 1 9920700 5705700 4215000 1458 114 1609 3642;3643 3369 3369 206 1 ERVTPPEGYEVVTVFPK IYCEKHARERVTPPEG EVVTVFPK________ R E R P K - 0 1 0 0 0 0 3 1 0 0 0 1 0 1 3 0 2 0 1 4 0 0 17 1 1946.0149 O00151 O00151 313 329 PDLIM1 PDZ and LIM domain protein 1 yes yes 2;3 3.0964E-11 124.68 By MS/MS By MS/MS 2 2 71138000 36335000 34803000 1459 1321 1610 3644;3645;3646;3647 3370;3371;3372 3370 7494 3 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR TGDSASERESAAPAAA ALPSPAIRAPLPDLYP R E S I R A 9 2 0 0 0 1 3 0 0 1 1 0 0 0 9 3 2 0 0 2 0 0 33 1 3245.7044 Q92841 Q92841 36 68 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 3 0.0014475 49.445 By MS/MS By MS/MS 1 1 78277000 41144000 37133000 1460 2441 1611 3648;3649 3373;3374 3374 4915 2 ESAEPPLTQSDK TLHLCSAKESAEPPLT PPLTQSDKRETSHTTA K E S D K R 1 0 0 1 0 1 2 0 0 0 1 1 0 0 2 2 1 0 0 0 0 0 12 0 1300.6147 Q86TB3 Q86TB3 569 580 ALPK2 Alpha-protein kinase 2 yes yes 2 0.012542 65.563 By MS/MS By matching 1 1 12126000 6678600 5447000 1461 2228 1612 3650;3651 3375 3375 4466 1 ESASPTIPNLDLLEAHTK KKKGKKSRESASPTIP DLLEAHTKEALTKMEP R E S T K E 2 0 1 1 0 0 2 0 1 1 3 1 0 0 2 2 2 0 0 0 0 0 18 0 1934.9949 O75151 O75151 536 553 PHF2 Lysine-specific demethylase PHF2 yes yes 3 2.2292E-06 100.76 By MS/MS By MS/MS 1 1 17472000 10101000 7371100 1462 1430 1613 3652;3653 3376;3377 3377 2633;2634;6627 2 ESCSSPSTVGSSLTTR TPQQQKCRESCSSPST VGSSLTTRKIDPPAVP R E S T R K 0 1 0 0 1 0 1 1 0 0 1 0 0 0 1 6 3 0 0 1 0 0 16 0 1654.7468 E9PMC9;Q7Z589;H0YEP9 E9PMC9 1111 1126 C11orf30;EMSY Protein EMSY yes no 2 0.00026419 87.148 By MS/MS By MS/MS 1 1 9366400 5444500 3921900 1463 827 1614 3654;3655 3378;3379 3378 1473;1474 2 ESDQTLAALLSPK TEEPLPVKESDQTLAA LAALLSPKESSGGEKE K E S P K E 2 0 0 1 0 1 1 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 13 0 1371.7246 P18583;H7C1M2 P18583 1687 1699 SON Protein SON yes no 2 3.4691E-21 170.95 By MS/MS By MS/MS 1 1 11758000 5285200 6472400 1464 1600 1615 3656;3657 3380;3381;3382;3383;3384;3385 3382 2938;6679 6 ESDTKNEVNGTSEDIKSEGDTQSN EDTNTESKESDTKNEV SEGDTQSN________ K E S S N - 0 0 3 3 0 1 4 2 0 1 0 2 0 0 0 4 3 0 0 1 0 0 24 2 2583.1056 O95232 O95232 409 432 LUC7L3 Luc7-like protein 3 yes yes 3 0.00085438 59.565 By MS/MS By matching 1 1 21428000 11039000 10389000 1465 1478 1616 3658;3659 3386 3386 2734 1 ESEDKPEIEDVGSDEEEEK EEKEKEEKESEDKPEI GSDEEEEKKDGDKKKK K E S E K K 0 0 0 3 0 0 8 1 0 1 0 2 0 0 1 2 0 0 0 1 0 0 19 1 2191.9128 P07900 P07900 251 269 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2;3 5.0259E-05 79.94 By MS/MS By MS/MS 2 2 164560000 86569000 77996000 1466 1540 1617 3660;3661;3662;3663 3387;3388 3387 2832 2 ESEDKPEIEDVGSDEEEEKK EEKEKEEKESEDKPEI SDEEEEKKDGDKKKKK K E S K K D 0 0 0 3 0 0 8 1 0 1 0 3 0 0 1 2 0 0 0 1 0 0 20 2 2320.0078 P07900 P07900 251 270 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2;3 2.008E-25 131.48 By MS/MS By MS/MS 2 2 339190000 149700000 189500000 1467 1540 1618 3664;3665;3666;3667 3389;3390;3391;3392 3391 2832 4 ESEGLYGQPGDETYQDIFR ARMNEEMRESEGLYGQ ETYQDIFRDFSQMASN R E S F R D 0 1 0 2 0 2 3 3 0 1 1 0 0 1 1 1 1 0 2 0 0 0 19 0 2202.9706 A0A087X1H5;Q15057 A0A087X1H5 736 754 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 2;3 8.4191E-10 116.19 By MS/MS By MS/MS 3 3 31460000 17827000 13633000 1468 139 1619 3668;3669;3670;3671;3672;3673 3393;3394;3395;3396 3393 6256;7180 4 ESEQESEEEILAQK NKGTKSLKESEQESEE EEEILAQKKEQREEEV K E S Q K K 1 0 0 0 0 2 6 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 14 0 1647.7475 Q9BW71 Q9BW71 222 235 HIRIP3 HIRA-interacting protein 3 yes yes 2 0.00080979 94.781 By MS/MS By MS/MS 1 1 6213600 3152800 3060800 1469 2589 1620 3674;3675 3397;3398 3397 5236;5237 2 ESFGGSSEIVDQLEVEIR EKLVIQLKESFGGSSE DQLEVEIRNMTLLVEK K E S I R N 0 1 0 1 0 1 4 2 0 2 1 0 0 1 0 3 0 0 0 2 0 0 18 0 1992.964 Q6UX06 Q6UX06 175 192 OLFM4 Olfactomedin-4 yes yes 2 4.3938E-19 132.86 By MS/MS By MS/MS 1 1 14379000 6806500 7572100 1470 2170 1621 3676;3677 3399;3400 3400 2 ESGVVAVSPEKSESPQKEDGLSSQLK AAAQAGERESGVVAVS DGLSSQLKSDPVDPDK R E S L K S 1 0 0 1 0 2 4 2 0 0 2 3 0 0 2 6 0 0 0 3 0 0 26 2 2714.361 Q96T58 Q96T58 2113 2138 SPEN Msx2-interacting protein yes yes 3 0.00014876 66.041 By matching By MS/MS 1 1 22434000 11008000 11426000 1471 2545 1622 3678;3679 3401 3401 5142;5143 1 ESKEEETSIDVAGKPNEVTK QKANEQKKESKEEETS GKPNEVTKAAESPDQK K E S T K A 1 0 1 1 0 0 5 1 0 1 0 3 0 0 1 2 2 0 0 2 0 0 20 2 2189.0699 P53985 P53985 460 479 SLC16A1 Monocarboxylate transporter 1 yes yes 3 5.3605E-08 87.554 By MS/MS By MS/MS 1 1 144590000 62898000 81694000 1472 1764 1623 3680;3681 3402;3403 3402 3331;6736 2 ESKGSPVFLPR AAAKMDGKESKGSPVF GSPVFLPRKENSSVEA K E S P R K 0 1 0 0 0 0 1 1 0 0 1 1 0 1 2 2 0 0 0 1 0 0 11 1 1215.6612 J3QSD7;Q9NYV4 J3QSD7 418 428 CDK12 Cyclin-dependent kinase 12 yes no 2;3 0.0014703 97.463 By MS/MS By MS/MS 2 2 30809000 19184000 11625000 1473 1260 1624 3682;3683;3684;3685 3404;3405;3406 3404 2282 3 ESLCDSPHQNLSRPLLENK NYRNESARESLCDSPH SRPLLENKLKAFSIGK R E S N K L 0 1 2 1 1 1 2 0 1 0 4 1 0 0 2 3 0 0 0 0 0 0 19 1 2236.0906 O15042;E7ET15;U3KPT1;C9JDJ7;C9J5L1;E7EW00;H0Y8D9 O15042 62 80 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 3 0.00041608 73.593 By MS/MS By matching 1 1 46006000 29301000 16705000 1474 1353 1625 3686;3687 3407 3407 2470 1 ESLKEEDESDDDNM EEAEKYAKESLKEEDE DESDDDNM________ K E S N M - 0 0 1 4 0 0 4 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 14 1 1654.6152 H0YJ03;G3V4X5;P25788 H0YJ03 70 83 PSMA3 Proteasome subunit alpha type-3 yes no 2 3.4583E-150 237.59 By MS/MS By MS/MS 1 1 1300700000 714590000 586140000 1475 977 1626 3688;3689 3408;3409;3410;3411;3412 3409 1779 5 ESLSMLKLPDLPQNSVKLQTTNTTR TNSMVQPKESLSMLKL LQTTNTTRSVLKDAEK K E S T R S 0 1 2 1 0 2 1 0 0 0 5 2 1 0 2 3 4 0 0 1 0 0 25 2 2813.4957 A0A087WYM5;Q9BVV6 A0A087WYM5 372 396 KIAA0586 Protein TALPID3 yes no 3 0.001131 67.579 By MS/MS 1 0 0 0 1476 97 1627 3690 3413 3413 11 181;182 1 ESLSTHTSPSQSPNSVHGSR NKLTSASKESLSTHTS PNSVHGSRRGSISSMS K E S S R R 0 1 1 0 0 1 1 1 2 0 1 0 0 0 2 7 2 0 0 1 0 0 20 0 2093.9726 Q9H1K0 Q9H1K0 208 227 RBSN Rabenosyn-5 yes yes 3 0.016158 44.468 By matching By MS/MS 1 1 7078000 3480800 3597200 1477 2638 1628 3691;3692 3414 3414 5379;5380 1 ESMFVFSSDDEEVTPAR SRFEIEKRESMFVFSS DEEVTPARAVSRHFED R E S A R A 1 1 0 2 0 0 3 0 0 0 0 0 1 2 1 3 1 0 0 2 0 0 17 0 1944.8411 Q9Y6P5 Q9Y6P5 307 323 SESN1 Sestrin-1 yes yes 2 0.013636 55.546 By MS/MS By MS/MS 2 2 13680000 7256500 6423300 1478 2952 1629;1630 3693;3694;3695;3696 3415;3416;3417 3415 6133 3 ESNPATINAATELDTPK VSAVKEDKESNPATIN ATELDTPKDLQVSETA K E S P K D 3 0 2 1 0 0 2 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 17 0 1770.8636 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 973 989 TNC Tenascin yes no 2 0.028191 41.48 By MS/MS 1 0 0 0 1479 762 1631 3697 3418 3418 1 ESNTPAPSTQGLPDSWGIIAEPR VNMDFTKRESNTPAPS WGIIAEPRQSAFSNYV R E S P R Q 2 1 1 1 0 1 2 2 0 2 1 0 0 0 4 3 2 1 0 0 0 0 23 0 2422.1765 O14654 O14654 930 952 IRS4 Insulin receptor substrate 4 yes yes 2;3 1.9538E-09 89.186 By MS/MS By MS/MS 2 2 118230000 63758000 54468000 1480 1343 1632 3698;3699;3700;3701 3419;3420;3421 3421 2440 3 ESNYFGLSPEER EDFDHTSRESNYFGLS FGLSPEERREKQAIEE R E S E R R 0 1 1 0 0 0 3 1 0 0 1 0 0 1 1 2 0 0 1 0 0 0 12 0 1426.6365 Q01804 Q01804 436 447 OTUD4 OTU domain-containing protein 4 yes yes 2 0.012036 65.895 By MS/MS By MS/MS 1 1 7852400 4342700 3509800 1481 1833 1633 3702;3703 3422;3423 3423 3431 2 ESPESEGPIYEGLIL LEHLRLRRESPESEGP PIYEGLIL________ R E S I L - 0 0 0 0 0 0 4 2 0 2 2 0 0 0 2 2 0 0 1 0 0 0 15 0 1631.793 Q96QK1 Q96QK1 782 796 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 1.5115E-35 166.07 By MS/MS By MS/MS 1 1 50056000 29850000 20207000 1482 2532 1634 3704;3705 3424;3425 3424 7854 2 ESPFSTSASPLLSGSQHFDVPPR HLAAELYRESPFSTSA QHFDVPPRRQLYLPML R E S P R R 1 1 0 1 0 1 1 1 1 0 2 0 0 2 4 6 1 0 0 1 0 0 23 0 2442.1816 O14980 O14980 383 405 XPO1 Exportin-1 yes yes 3 0.025136 40.158 By MS/MS By matching 2 1 7745800 6122600 1623100 1483 1350 1635 3706;3707;3708 3426 3426 1 ESPGPIGLSTEK E S E K 0 0 0 0 0 0 2 2 0 1 1 1 0 0 2 2 1 0 0 0 0 0 12 0 1213.619 REV__E5RHI8 yes yes 2 0.0010377 102.05 By MS/MS By MS/MS 1 2 353910000 121980000 231930000 + 1484 2971 1636 3709;3710;3711 3427;3428;3429;3430;3431;3432 3432 6156 6 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR EGTGQQERESPRPLQL AGAAGAGRRDFVEAPP R E S G R R 8 2 0 1 0 1 5 13 0 1 2 0 0 0 5 2 0 0 0 0 0 0 40 1 3526.6673 Q6PKG0;A0A0B4J210 Q6PKG0 74 113 LARP1 La-related protein 1 yes no 4 9.1945E-08 58.867 By MS/MS By matching 1 1 26964000 15129000 11835000 1485 2162 1637 3712;3713 3433 3433 4302 1 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGRR EGTGQQERESPRPLQL GAAGAGRRDFVEAPPP R E S R R D 8 3 0 1 0 1 5 13 0 1 2 0 0 0 5 2 0 0 0 0 0 0 41 2 3682.7684 Q6PKG0;A0A0B4J210 Q6PKG0 74 114 LARP1 La-related protein 1 yes no 4 1.8426E-08 63.305 By MS/MS By matching 1 1 105590000 59758000 45836000 1486 2162 1638 3714;3715 3434 3434 4302 1 ESQNSLDESLPFR DSHFPAWRESQNSLDE LDESLPFRGSGTAIKP R E S F R G 0 1 1 1 0 1 2 0 0 0 2 0 0 1 1 3 0 0 0 0 0 0 13 0 1520.7107 Q8IXW5 Q8IXW5 425 437 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 2 0.0051375 72.681 By MS/MS By MS/MS 1 1 5538900 2955700 2583300 1487 2282 1639 3716;3717 3435;3436 3435 4581;4582 2 ESRSPQQSAALPR PKAALEPKESRSPQQS QQSAALPRRYMLRERE K E S P R R 2 2 0 0 0 2 1 0 0 0 1 0 0 0 2 3 0 0 0 0 0 0 13 1 1425.7324 E5RJN3;A0A0A6YYG7;Q6IBW4 E5RJN3 247 259 NCAPH2 Condensin-2 complex subunit H2 yes no 2 0.0017067 101.45 By MS/MS By MS/MS 1 1 27572000 14503000 13069000 1488 254 1640 3718;3719 3437;3438 3438 461 2 ESSANNSVSPSESLR HELDHRERESSANNSV VSPSESLRASEKHRGS R E S L R A 1 1 2 0 0 0 2 0 0 0 1 0 0 0 1 6 0 0 0 1 0 0 15 0 1562.7172 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726 H0YKH0 195 209 TLE3 Transducin-like enhancer protein 3 yes no 2 6.333E-69 197.29 By MS/MS By MS/MS 1 1 123840000 67094000 56743000 1489 897 1641 3720;3721 3439;3440;3441;3442 3440 1609 4 ESSIIAPAPAEDVDTPPR QVYEFRVKESSIIAPA EDVDTPPRKKKRKHRL K E S P R K 3 1 0 2 0 0 2 0 0 2 0 0 0 0 4 2 1 0 0 1 0 0 18 0 1863.9214 Q15910 Q15910 473 490 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 2;3 7.2147E-08 111.44 By MS/MS By MS/MS 2 2 51899000 23851000 28048000 1490 2013 1642 3722;3723;3724;3725 3443;3444;3445 3445 6837 3 ESSIIAPAPAEDVDTPPRK QVYEFRVKESSIIAPA DVDTPPRKKKRKHRLW K E S R K K 3 1 0 2 0 0 2 0 0 2 0 1 0 0 4 2 1 0 0 1 0 0 19 1 1992.0164 Q15910 Q15910 473 491 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 3 4.1497E-05 79.805 By MS/MS By matching 1 1 7419800 3669900 3749800 1491 2013 1643 3726;3727 3446 3446 6837 1 ESSIIAPAPAEDVDTPPRKK QVYEFRVKESSIIAPA VDTPPRKKKRKHRLWA K E S K K K 3 1 0 2 0 0 2 0 0 2 0 2 0 0 4 2 1 0 0 1 0 0 20 2 2120.1113 Q15910 Q15910 473 492 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 3 0.0053288 71.601 By MS/MS By matching 1 1 13159000 7157000 6002000 1492 2013 1644 3728;3729 3447 3447 6837 1 ESSLADEEPVEK E S E K 1 0 0 1 0 0 4 0 0 0 1 1 0 0 1 2 0 0 0 1 0 0 12 0 1331.6093 REV__Q96N46 yes yes 3 0.0090239 61.03 By MS/MS By MS/MS 1 2 42174000 14818000 27356000 + 1493 3008 1645 3730;3731;3732 3448;3449;3450 3449 6201 3 ESSLSPSPASSISSR LPLEPSYRESSLSPSP PASSISSRSWFSDASS R E S S R S 1 1 0 0 0 0 1 0 0 1 1 0 0 0 2 8 0 0 0 0 0 0 15 0 1490.7213 I3L3K7;H3BR83;H3BRS1;Q12968 I3L3K7 159 173 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 yes no 2 0.012182 58.626 By matching By MS/MS 1 1 2942000 1499200 1442700 1494 1135 1646 3733;3734 3451 3451 2070 0 ESSPLYSPTFSDSTSAVK DISPLTPRESSPLYSP SDSTSAVKEKTATCHS R E S V K E 1 0 0 1 0 0 1 0 0 0 1 1 0 1 2 6 2 0 1 1 0 0 18 0 1901.8895 P46821 P46821 1791 1808 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0029466 66.939 By MS/MS By MS/MS 3 3 63420000 38513000 24907000 1495 1712 1647;1648;1649 3735;3736;3737;3738;3739;3740 3452;3453;3454;3455 3453 3172;3173;3174;7611 4 ESSPLYSPTFSDSTSAVKEK DISPLTPRESSPLYSP STSAVKEKTATCHSSS R E S E K T 1 0 0 1 0 0 2 0 0 0 1 2 0 1 2 6 2 0 1 1 0 0 20 1 2159.027 P46821 P46821 1791 1810 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 2.808E-05 76.761 By MS/MS By MS/MS 4 4 47662000 24652000 23010000 1496 1712 1650;1651 3741;3742;3743;3744;3745;3746;3747;3748 3456;3457;3458;3459;3460 3456 3172;3173;3174;7611 5 ESSRPVK TTKLGQRRESSRPVKP RESSRPVKPPKKDVPD R E S V K P 0 1 0 0 0 0 1 0 0 0 0 1 0 0 1 2 0 0 0 1 0 0 7 1 801.43447 O60885;M0QZD9 O60885 323 329 BRD4 Bromodomain-containing protein 4 yes no 2 0.0085732 106.18 By MS/MS 2 131340000 131340000 0 1497 1424 1652 3749;3750 3461;3462;3463;3464;3465;3466;3467 3463 2625 7 ESTAKQTGMKYR PQHHISLKESTAKQTG KQTGMKYRNMGDIWRS K E S Y R N 1 1 0 0 0 1 1 1 0 0 0 2 1 0 0 1 2 0 1 0 0 0 12 2 1398.6925 H7C4S9;F8W6W4 H7C4S9 59 70 KCNAB1 yes no 2 0.025872 42.031 By MS/MS By matching 1 1 14617000 7093800 7523500 1498 935 1653 3751;3752 3468 3468 7414 1 ESTESSNTTIEDEDVK LKKPDGVKESTESSNT TIEDEDVKARKQEIIK K E S V K A 0 0 1 2 0 0 4 0 0 1 0 1 0 0 0 3 3 0 0 1 0 0 16 0 1782.7643 H0Y9J2;D6R938;E9PBG7;E9PF82;Q13557 H0Y9J2 33 48 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 2 0.00025574 109.14 By MS/MS By MS/MS 1 1 14822000 7582900 7238700 1499 643 1654 3753;3754 3469;3470 3469 6389 2 ESTHQSEDVFLPSPR SYLSDNTRESTHQSED DVFLPSPRDCFPYNNY R E S P R D 0 1 0 1 0 1 2 0 1 0 1 0 0 1 2 3 1 0 0 1 0 0 15 0 1727.8115 Q13017;A0A0A0MSK6 Q13017 956 970 ARHGAP5 Rho GTPase-activating protein 5 yes no 2;3 0.0023952 65.25 By MS/MS By MS/MS 2 2 13553000 6865200 6687400 1500 1891 1655 3755;3756;3757;3758 3471;3472;3473;3474 3471 3607 3 ESTSSKSPPR EMFETAIKESTSSKSP TSSKSPPRKINSSPNV K E S P R K 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 4 1 0 0 0 0 0 10 1 1074.5306 P78347 P78347 817 826 GTF2I General transcription factor II-I yes yes 2;3 0.00011615 122.34 By MS/MS By MS/MS 4 2 115840000 16135000 99704000 1501 1815 1656 3759;3760;3761;3762;3763;3764 3475;3476;3477;3478;3479;3480;3481 3478 3385;3386 7 ESVPEFPLSPPK LILSPRSKESVPEFPL EFPLSPPKKKDLSLEE K E S P K K 0 0 0 0 0 0 2 0 0 0 1 1 0 1 4 2 0 0 0 1 0 0 12 0 1325.6867 A2A2D0;P16949 A2A2D0 30 41 STMN1 Stathmin yes no 2 3.9094E-37 187.74 By MS/MS By MS/MS 1 2 84895000 37592000 47303000 1502 393 1657 3765;3766;3767 3482;3483;3484;3485;3486;3487;3488;3489;3490 3490 756 9 ESVPEFPLSPPKKK LILSPRSKESVPEFPL PLSPPKKKDLSLEEIQ K E S K K D 0 0 0 0 0 0 2 0 0 0 1 3 0 1 4 2 0 0 0 1 0 0 14 2 1581.8766 A2A2D0;P16949 A2A2D0 30 43 STMN1 Stathmin yes no 3 1.0748E-20 157.58 By MS/MS By MS/MS 1 2 38106000 21492000 16614000 1503 393 1658 3768;3769;3770 3491;3492;3493;3494;3495 3491 756 5 ESVSTASDQPSHSLER EESSRSGRESVSTASD QPSHSLERQMNGNQEK R E S E R Q 1 1 0 1 0 1 2 0 1 0 1 0 0 0 1 5 1 0 0 1 0 0 16 0 1728.7915 Q5VWV2;Q8TEW0;Q5VWU8;F5GZI3 Q5VWV2 901 916 PARD3 Partitioning defective 3 homolog yes no 3 0.023801 45.873 By matching By MS/MS 1 1 5289900 2904400 2385500 1504 2121 1659 3771;3772 3496 3496 1 ESWVSPR DLKQQSTRESWVSPRK RESWVSPRKRGLSSSE R E S P R K 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 2 0 1 0 1 0 0 7 0 859.41882 Q8IYH5 Q8IYH5 78 84 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.014228 128.86 By MS/MS 1 4458600 0 4458600 1505 2288 1660 3773 3497 3497 4590 1 ESYDAPPTPSGAR DGGETESRESYDAPPT PPTPSGARLIPDFPVA R E S A R L 2 1 0 1 0 0 1 1 0 0 0 0 0 0 3 2 1 0 1 0 0 0 13 0 1346.6103 Q96S55 Q96S55 109 121 WRNIP1 ATPase WRNIP1 yes yes 2 0.0058565 98.253 By MS/MS By MS/MS 1 1 18891000 11079000 7812100 1506 2538 1661 3774;3775 3498;3499 3498 7014 2 ESYEVSLTQK EELRNKNRESYEVSLT YEVSLTQKTDPSVRPM R E S Q K T 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 1 0 1 1 0 0 10 0 1182.5768 D6RDK6;D6RBN5;Q9NX40 D6RDK6 154 163 OCIAD1 OCIA domain-containing protein 1 yes no 2 0.025987 53.089 By matching By MS/MS 1 1 6677200 3853800 2823400 1507 661 1662 3776;3777 3500 3500 7344 0 ESYSIYVYK KKRKRSRKESYSIYVY SYSIYVYKVLKQVHPD K E S Y K V 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 2 0 0 3 1 0 0 9 0 1150.5546 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 36 44 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C yes no 2 0.016819 69.628 By MS/MS By MS/MS 2 2 9637600 5383100 4254600 1508 1534 1663;1664 3778;3779;3780;3781 3501;3502 3502 2823;2824 2 ETAVPGPLGIEDISPNLSPDDKSFSR PSRTTGTRETAVPGPL PDDKSFSRVVPRVPDS R E T S R V 1 1 1 3 0 0 2 2 0 2 2 1 0 1 4 4 1 0 0 1 0 0 26 1 2740.3556 Q12888;A6NNK5 Q12888 1413 1438 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.018276 44.848 By MS/MS By matching 1 1 75400000 45441000 29959000 1509 1882 1665 3782;3783 3503 3503 3571;3572 1 ETCFDMLQMDSR PVFQTEDKETCFDMLQ DMLQMDSRIAGYYYAR K E T S R I 0 1 0 2 1 1 1 0 0 0 1 0 2 1 0 1 1 0 0 0 0 0 12 0 1531.6105 Q9UNW8 Q9UNW8 184 195 GPR132 Probable G-protein coupled receptor 132 yes yes 2 0.013545 68.846 By MS/MS 1 38994000 38994000 0 1510 2864 1666 3784 3504 3504 372 1 ETEAAPTSPPIVPLK TSGSKTGRETEAAPTS SPPIVPLKSRHLVAAA R E T L K S 2 0 0 0 0 0 2 0 0 1 1 1 0 0 4 1 2 0 0 1 0 0 15 0 1548.8399 A0A0J9YVS1;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3 A0A0J9YVS1 1011 1025 KANSL1 KAT8 regulatory NSL complex subunit 1 yes no 2 0.00035145 99.161 By MS/MS By matching 1 1 6184800 2775800 3409000 1511 327 1667 3785;3786 3505 3505 611 1 ETERASPIK AKDVTLLKETERASPI TERASPIKMDLAPSKD K E T I K M 1 1 0 0 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 0 0 0 9 1 1029.5455 E7EVA0;P27816 E7EVA0 370 378 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.014792 72.848 By matching By MS/MS 1 1 8880100 4081300 4798900 1512 742 1668 3787;3788 3506 3506 1343 1 ETERASPIKMDLAPSK AKDVTLLKETERASPI KMDLAPSKDMGPPKEN K E T S K D 2 1 0 1 0 0 2 0 0 1 1 2 1 0 2 2 1 0 0 0 0 0 16 2 1771.9138 E7EVA0;P27816 E7EVA0 370 385 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.00012987 97.767 By MS/MS By MS/MS 2 2 86173000 47790000 38382000 1513 742 1669;1670 3789;3790;3791;3792 3507;3508;3509;3510 3510 89 1343 4 ETKVKPEDK AKEKTVKKETKVKPED TKVKPEDKKEEKEKPK K E T D K K 0 0 0 1 0 0 2 0 0 0 0 3 0 0 1 0 1 0 0 1 0 0 9 2 1072.5764 P46821;D6RA40;D6RA32 P46821 641 649 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 3 0.014476 57.59 By MS/MS 1 0 0 0 1514 1712 1671 3793 3511 3511 1 ETPHSPGVEDAPIAK PAQLANARETPHSPGV VEDAPIAKVGVLAASM R E T A K V 2 0 0 1 0 0 2 1 1 1 0 1 0 0 3 1 1 0 0 1 0 0 15 0 1546.7627 F8VS07;F8VQE1;Q9UHB6 F8VS07 183 197 LIMA1 LIM domain and actin-binding protein 1 yes no 2;3 1.3481E-09 122.1 By MS/MS By MS/MS 2 2 745210000 419120000 326090000 1515 911 1672 3794;3795;3796;3797 3512;3513;3514;3515 3513 1636 4 ETPHSPGVEDAPIAKVGVLAASMEAK PAQLANARETPHSPGV LAASMEAKASSQQEKE R E T A K A 5 0 0 1 0 0 3 2 1 1 1 2 1 0 3 2 1 0 0 3 0 0 26 1 2603.3265 F8VS07;F8VQE1;Q9UHB6 F8VS07 183 208 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.00092235 56.57 By matching By MS/MS 1 1 15362000 7115100 8246400 1516 911 1673 3798;3799 3516 3516 1636 1 ETPPNGNLSPAPR KGKLGGPKETPPNGNL GNLSPAPRLRRDYSYE K E T P R L 1 1 2 0 0 0 1 1 0 0 1 0 0 0 4 1 1 0 0 0 0 0 13 0 1348.6735 P48634 P48634 996 1008 PRRC2A Protein PRRC2A yes yes 2 0.0019572 96.82 By MS/MS By MS/MS 2 2 67759000 39257000 28502000 1517 1718 1674;1675 3800;3801;3802;3803 3517;3518;3519;3520;3521;3522;3523;3524;3525;3526;3527 3519 14;15 3206 11 ETQSPEQVKSEK SERITVKKETQSPEQV PEQVKSEKLKDLFDYS K E T E K L 0 0 0 0 0 2 3 0 0 0 0 2 0 0 1 2 1 0 0 1 0 0 12 1 1388.6783 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 493 504 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 1.1829E-115 232.78 By MS/MS By MS/MS 2 2 64045000 27253000 36792000 1518 2759 1676 3804;3805;3806;3807 3528;3529;3530;3531;3532 3531 5645 5 ETRISFVEEDVHPK GRSPQRLKETRISFVE VEEDVHPKWIPGAADD K E T P K W 0 1 0 1 0 0 3 0 1 1 0 1 0 1 1 1 1 0 0 2 0 0 14 1 1684.842 Q8WYP5 Q8WYP5 1228 1241 AHCTF1 Protein ELYS yes yes 3 0.00053904 92.236 By MS/MS By MS/MS 1 1 11375000 4427400 6947900 1519 2417 1677 3808;3809 3533;3534 3533 4850;6981 2 ETSAATLSPGASSR LEVSPGSRETSAATLS LSPGASSRGWDDGDTR R E T S R G 3 1 0 0 0 0 1 1 0 0 1 0 0 0 1 4 2 0 0 0 0 0 14 0 1333.6474 A0A087WTU3;Q9Y6I9 A0A087WTU3 163 176 TEX264 Testis-expressed sequence 264 protein yes no 2 6.5755E-21 161.49 By MS/MS By MS/MS 1 1 22229000 11082000 11147000 1520 34 1678 3810;3811 3535;3536;3537 3536 63;64;65 3 ETSFGSSENITMTSLSK ATSILQKKETSFGSSE ITMTSLSKVTTFVSED K E T S K V 0 0 1 0 0 0 2 1 0 1 1 1 1 1 0 5 3 0 0 0 0 0 17 0 1817.8353 Q9UMZ2;A0A087WZS7 Q9UMZ2 930 946 SYNRG Synergin gamma yes no 2 2.5058E-25 154.46 By MS/MS By MS/MS 1 1 27926000 13601000 14326000 1521 2859 1679 3812;3813 3538;3539 3538 5890 2 ETSKVIYDFIEK SEAQLKDRETSKVIYD VIYDFIEKTGGVEAVK R E T E K T 0 0 0 1 0 0 2 0 0 2 0 2 0 1 0 1 1 0 1 1 0 0 12 1 1470.7606 O00401 O00401 250 261 WASL Neural Wiskott-Aldrich syndrome protein yes yes 2 6.6565E-37 184.24 By MS/MS By MS/MS 1 1 8036000 4831900 3204100 1522 1331 1680 3814;3815 3540;3541 3540 7498 2 ETSVSKEDTDHEEK SDVEVEEKETSVSKED EDTDHEEKASNEDVTK K E T E K A 0 0 0 2 0 0 4 0 1 0 0 2 0 0 0 2 2 0 0 1 0 0 14 1 1632.7115 O75475 O75475 114 127 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 0.0066508 61.815 By MS/MS By MS/MS 1 1 13933000 7421700 6511600 1523 1440 1681 3816;3817 3542;3543 3543 6629 2 ETVFTKSPYQEFTDHLVK YLTPDLWKETVFTKSP EFTDHLVKTHTRVSVQ K E T V K T 0 0 0 1 0 1 2 0 1 0 1 2 0 2 1 1 3 0 1 2 0 0 18 1 2168.079 H0YEN5;E9PQD7;P15880 H0YEN5 160 177 RPS2 40S ribosomal protein S2 yes no 3 5.2596E-06 89.484 By matching By MS/MS 1 1 10877000 3703300 7173900 1524 838 1682 3818;3819 3544 3544 1516 1 ETVNSPAIYK TQKVKVKKETVNSPAI VNSPAIYKFQSRRKR_ K E T Y K F 1 0 1 0 0 0 1 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 10 0 1120.5764 Q9Y3A2 Q9Y3A2 237 246 UTP11L Probable U3 small nucleolar RNA-associated protein 11 yes yes 2 0.0091528 72.289 By matching By MS/MS 1 1 15931000 8216000 7714800 1525 2905 1683 3820;3821 3545 3545 6049 1 ETYYLSDSPLLGPPVGEPR KSPTSLKRETYYLSDS GPPVGEPRLLASSPAL R E T P R L 0 1 0 1 0 0 2 2 0 0 3 0 0 0 4 2 1 0 2 1 0 0 19 0 2089.0368 Q9NYZ3 Q9NYZ3 145 163 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 1.9737E-06 95.631 By MS/MS By matching 1 1 7245900 3848400 3397500 1526 2762 1684 3822;3823 3546;3547 3547 7917 2 EVAEGGLPRAESPSPAPPPGLR SKDSPKDREVAEGGLP PAPPPGLRGTLDLQVI R E V L R G 3 2 0 0 0 0 3 3 0 0 2 0 0 0 6 2 0 0 0 1 0 0 22 1 2183.1335 Q9BUA3 Q9BUA3 297 318 C11orf84 Uncharacterized protein C11orf84 yes yes 3 0.028264 58.693 By matching By MS/MS 1 1 4749200 2236000 2513200 1527 2583 1685 3824;3825 3548 3548 5220 0 EVDEDSEPEREVR FVRVKREREVDEDSEP SEPEREVRAKNGRVDS R E V V R A 0 2 0 2 0 0 5 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 1 1587.7013 F8WC91;B9A018;Q53GS9 F8WC91 77 89 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 2;3 0.00054393 109.95 By MS/MS By MS/MS 2 2 128350000 65370000 62980000 1528 536 1686 3826;3827;3828;3829 3549;3550;3551 3550 975 3 EVDEQMLNVQNK FRGRMSMKEVDEQMLN QMLNVQNKNSSYFVEW K E V N K N 0 0 2 1 0 2 2 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 12 0 1445.682 Q5JP53;P07437;Q5ST81;P68371;Q9BVA1;Q13885 Q5JP53 307 318 TUBB;TUBB4B;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain no no 2 1.257E-61 200.71 By MS/MS By MS/MS 2 2 52021000 24680000 27341000 1529 1537;1935;1811 1687;1688 3830;3831;3832;3833 3552;3553;3554;3555 3555 186 4 EVDGLLTSEPMGSPVSSK EEPKGKEKEVDGLLTS MGSPVSSKTESVSDKE K E V S K T 0 0 0 1 0 0 2 2 0 0 2 1 1 0 2 4 1 0 0 2 0 0 18 0 1831.8873 Q8WWM7;H3BUF6 Q8WWM7 582 599 ATXN2L Ataxin-2-like protein yes no 2 1.349E-19 135.27 By MS/MS By MS/MS 2 2 76252000 45039000 31213000 1530 2409 1689;1690 3834;3835;3836;3837 3556;3557;3558;3559 3558 321 4817;6979 4 EVDYSGLR EWKELEQKEVDYSGLR EVDYSGLRVQAMQISS K E V L R V 0 1 0 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 8 0 937.45051 Q9UKY7;H0Y8K3 Q9UKY7 92 99 CDV3 Protein CDV3 homolog yes no 2 0.004253 96.492 By MS/MS By MS/MS 1 1 16075000 8767100 7308000 1531 2839 1691 3838;3839 3560;3561 3561 7938 2 EVEDKESEGEEEDEDEDLSK VGPASILKEVEDKESE DEDEDLSKYKLDEDED K E V S K Y 0 0 0 4 0 0 9 1 0 0 1 2 0 0 0 2 0 0 0 1 0 0 20 1 2338.9296 O95218 O95218 147 166 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 2.7599E-08 89.507 By MS/MS By MS/MS 1 1 139830000 71924000 67902000 1532 1477 1692 3840;3841 3562;3563 3562 2732 2 EVEDKESEGEEEDEDEDLSKYK VGPASILKEVEDKESE DEDLSKYKLDEDEDED K E V Y K L 0 0 0 4 0 0 9 1 0 0 1 3 0 0 0 2 0 0 1 1 0 0 22 2 2630.0879 O95218 O95218 147 168 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 4.5255E-06 83.465 By MS/MS By MS/MS 1 1 26143000 16632000 9510600 1533 1477 1693 3842;3843 3564;3565 3564 2732 2 EVELVSE KKKKKKAKEVELVSE_ KEVELVSE________ K E V S E - 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 803.39126 O60832 O60832 508 514 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 1;2 0.0068854 104.75 By MS/MS By MS/MS 2 2 307960000 159870000 148090000 1534 1423 1694 3844;3845;3846;3847 3566;3567;3568 3568 2620 3 EVFEDAAEIR KVTQDELKEVFEDAAE FEDAAEIRLVSKDGKS K E V I R L 2 1 0 1 0 0 3 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 10 0 1177.5615 P19338;H7BY16 P19338 411 420 NCL Nucleolin yes no 2 0.00029559 113.71 By MS/MS By MS/MS 1 1 9515700 4527400 4988300 1535 1604 1695 3848;3849 3569;3570 3569 2 EVGDYGQLHETEVLLK KIFKGVRREVGDYGQL HETEVLLKVLDKAHRN R E V L K V 0 0 0 1 0 1 3 2 1 0 3 1 0 0 0 0 1 0 1 2 0 0 16 0 1828.9207 A0A1B0GTR9;O60674 A0A1B0GTR9 566 581 JAK2 Tyrosine-protein kinase JAK2 yes no 3 0.024731 53.981 By MS/MS 1 0 0 0 1536 366 1696 3850 3571 3571 7251 1 EVGGGHGCTSPPFPQEAR PCTSTLPREVGGGHGC PPFPQEARAEISERSG R E V A R A 1 1 0 0 1 1 2 4 1 0 0 0 0 1 3 1 1 0 0 1 0 0 18 0 1881.8428 A0A1B0GVD3;Q6ZN17 A0A1B0GVD3 202 219 LIN28B Protein lin-28 homolog B yes no 3 0.0030971 60.032 By MS/MS By MS/MS 1 1 18968000 11036000 7931700 1537 378 1697 3851;3852 3572;3573 3573 715 2 EVHEELAKAKSEDSDVELSD LTRILMVREVHEELAK DSDVELSD________ R E V S D - 2 0 0 3 0 0 5 0 1 0 2 2 0 0 0 3 0 0 0 2 0 0 20 2 2229.0285 Q5VZL5;H7C1I7 Q5VZL5 1529 1548 ZMYM4 Zinc finger MYM-type protein 4 yes no 2;3 0.0050869 63.827 By MS/MS By MS/MS 2 2 37763000 17890000 19873000 1538 2125 1698 3853;3854;3855;3856 3574;3575;3576 3576 4225;4226 3 EVIEIEDASPTKCPITTK EREREKLREVIEIEDA TKCPITTKLVLDEDEE R E V T K L 1 0 0 1 1 0 3 0 0 3 0 2 0 0 2 1 3 0 0 1 0 0 18 1 2030.0242 P46100 P46100 1519 1536 ATRX Transcriptional regulator ATRX yes yes 3 0.00013745 77.668 By matching By MS/MS 1 1 23365000 12139000 11226000 1539 1708 1699 3857;3858 3577 3577 3159 1 EVIKSPTASR KEGDFVYKEVIKSPTA IKSPTASRISLGKKVK K E V S R I 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 2 1 0 0 1 0 0 10 1 1086.6033 O94885 O94885 438 447 SASH1 SAM and SH3 domain-containing protein 1 yes yes 2 0.030148 62.298 By MS/MS 1 1899100 1899100 0 1540 1467 1700 3859 3578 3578 1 EVKAEEKSPISINVK ASKPSSPREVKAEEKS SPISINVKTVKKEPED R E V V K T 1 0 1 0 0 0 3 0 0 2 0 3 0 0 1 2 0 0 0 2 0 0 15 2 1669.9251 Q9UK58 Q9UK58 345 359 CCNL1 Cyclin-L1 yes yes 3 0.019015 52.644 By MS/MS By matching 1 1 44969000 26246000 18723000 1541 2825 1701 3860;3861 3579 3579 5804 1 EVKQSQDLEK LASEDTKKEVKQSQDL KQSQDLEKSGISRKND K E V E K S 0 0 0 1 0 2 2 0 0 0 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1202.6143 Q6Y288 Q6Y288 35 44 B3GALTL Beta-1,3-glucosyltransferase yes yes 1 0.014409 58.246 By MS/MS 1 3384600 3384600 0 1542 2177 1702 3862 3580 3580 4353 0 EVKYEAPQATDGLAGALDAR SSLADQRKEVKYEAPQ LAGALDARQQSTGAIP K E V A R Q 5 1 0 2 0 1 2 2 0 0 2 1 0 0 1 0 1 0 1 1 0 0 20 1 2074.0331 O60784 O60784 383 402 TOM1 Target of Myb protein 1 yes yes 3 0.00097695 66.448 By MS/MS By MS/MS 1 1 4675700 2231200 2444600 1543 1421 1703 3863;3864 3581;3582 3582 7531 2 EVLYDSEGLSGEER APASSPKREVLYDSEG EGLSGEERGGKSSQKD R E V E R G 0 1 0 1 0 0 4 2 0 0 2 0 0 0 0 2 0 0 1 1 0 0 14 0 1581.7158 Q9H7N4 Q9H7N4 729 742 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.0022997 98.676 By MS/MS By MS/MS 1 1 30953000 16625000 14328000 1544 2675 1704 3865;3866 3583;3584 3583 5454;5455;7893 2 EVMESAVGNSSGSGQNEESPR AELERKLREVMESAVG GQNEESPRKRKKATEA R E V P R K 1 1 2 0 0 1 4 3 0 0 0 0 1 0 1 5 0 0 0 2 0 0 21 0 2149.9182 Q9NVF7 Q9NVF7 326 346 FBXO28 F-box only protein 28 yes yes 2 0.0010816 69.747 By matching By MS/MS 1 1 30645000 16030000 14615000 1545 2740 1705 3867;3868 3585 3585 5610 1 EVNSQLYSKLTVR FRRFQRDKEVNSQLYS LYSKLTVRGKVQVKSS K E V V R G 0 1 1 0 0 1 1 0 0 0 2 1 0 0 0 2 1 0 1 2 0 0 13 1 1535.8308 K7ERE0;K7EPH4;F6XUP2;O43861 K7ERE0 152 164 ATP9B Probable phospholipid-transporting ATPase IIB yes no 3 0.009268 56.956 By matching By MS/MS 1 1 21622000 12814000 8807300 1546 909 1706 3869;3870 3586 3586 7408 1 EVPIYANR VSPVTPPREVPIYANR EVPIYANRFAVPTYAA R E V N R F 1 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 1 0 0 8 0 960.50288 Q13443 Q13443 765 772 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes yes 2 0.0096637 76.035 By MS/MS By MS/MS 1 1 38314000 20650000 17664000 1547 1917 1707 3871;3872 3587;3588 3588 7686 2 EVPSKEEPSPVKAEVAEK TKPSVTEKEVPSKEEP VKAEVAEKQATDVKPK K E V E K Q 2 0 0 0 0 0 5 0 0 0 0 3 0 0 3 2 0 0 0 3 0 0 18 2 1952.0102 P46821;D6RA40;D6RA32 P46821 606 623 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 3 0.011139 53.395 By matching By MS/MS 1 1 18638000 8759100 9878800 1548 1712 1708 3873;3874 3589 3589 3175 1 EVPWSPSAEK EARKQAEKEVPWSPSA PWSPSAEKASPQENGP K E V E K A 1 0 0 0 0 0 2 0 0 0 0 1 0 0 2 2 0 1 0 1 0 0 10 0 1128.5451 Q5JSZ5;Q5JT00 Q5JSZ5 552 561 PRRC2B Protein PRRC2B yes no 2 0.014063 67.214 By MS/MS By MS/MS 1 1 14730000 8935800 5794200 1549 2074 1709 3875;3876 3590;3591 3591 4079 2 EVQAEQPSSSSPR KEKEKADREVQAEQPS QPSSSSPRRKTVKEKD R E V P R R 1 1 0 0 0 2 2 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 13 0 1400.6532 Q9Y388 Q9Y388 178 190 RBMX2 RNA-binding motif protein, X-linked 2 yes yes 2 3.7502E-97 219.84 By MS/MS By MS/MS 1 1 18847000 9106800 9740300 1550 2904 1710 3877;3878 3592;3593;3594;3595 3594 6047;6048 4 EVRIYNNKSNSDIQK E V Q K 0 1 3 1 0 1 1 0 0 2 0 2 0 0 0 2 0 0 1 1 0 0 15 2 1806.9224 REV__Q14571 yes yes 3 0.013136 58.712 By MS/MS 1 21891000 0 21891000 + 1551 2995 1711 3879 3596 3596 6186;7974 1 EVRSPTKAPHLQLIEGK VQDGDGRREVRSPTKA HLQLIEGKKNSLRVEG R E V G K K 1 1 0 0 0 1 2 1 1 1 2 2 0 0 2 1 1 0 0 1 0 0 17 2 1902.0687 O43491;E9PK52;E9PHY5;H0Y5B0;E9PII3 O43491 595 611 EPB41L2 Band 4.1-like protein 2 yes no 3;4 0.0005755 75.445 By MS/MS By MS/MS 2 2 58549000 26845000 31704000 1552 1387 1712 3880;3881;3882;3883 3597;3598;3599;3600 3598 2538;6615 4 EVSPEVVR REEIIIKKEVSPEVVR EVSPEVVRSKLSPSPS K E V V R S 0 1 0 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 0 3 0 0 8 0 913.4869 Q5T200;A0A087WX14 Q5T200 196 203 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.018488 74.255 By matching By MS/MS 1 1 33447000 16335000 17112000 1553 2094 1713 3884;3885 3601 3601 4131 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR TSDDTDVREVSSRPST PNKIEDLRSECSSDFG R E V L R S 1 2 1 2 0 0 3 2 0 3 2 1 0 0 3 7 2 0 0 3 0 0 32 2 3339.7158 Q14C86;H0Y7I9;C9IZ08;H0Y4E7;F8W9S7 Q14C86 755 786 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 4 6.7228E-23 94.031 By MS/MS 1 23170000 23170000 0 1554 1964 1714 3886 3602;3603 3603 3818;3819 2 EVSYNWDPK FLGRGLDKEVSYNWDP VSYNWDPKDAASKPSG K E V P K D 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 9 0 1136.5138 O14654 O14654 844 852 IRS4 Insulin receptor substrate 4 yes yes 2 0.011528 65.224 By MS/MS By matching 1 1 5517000 3104600 2412400 1555 1343 1715 3887;3888 3604 3604 7503 1 EVTPILAQTQSSGPQTSTTPQVLSPTITSPPNALPR FSQSGNSREVTPILAQ SPPNALPRRSSRLFTS R E V P R R 2 1 1 0 0 4 1 1 0 2 3 0 0 0 7 5 7 0 0 2 0 0 36 0 3713.9476 G5EA36;P30260 G5EA36 341 376 CDC27 Cell division cycle protein 27 homolog yes no 4 5.2469E-06 60.562 By MS/MS By matching 1 1 82552000 52690000 29862000 1556 1000 1716 3889;3890 3605 3605 1828 1 EVTPILAQTQSSGPQTSTTPQVLSPTITSPPNALPRR FSQSGNSREVTPILAQ PPNALPRRSSRLFTSD R E V R R S 2 2 1 0 0 4 1 1 0 2 3 0 0 0 7 5 7 0 0 2 0 0 37 1 3870.0487 G5EA36;P30260 G5EA36 341 377 CDC27 Cell division cycle protein 27 homolog yes no 4 0.00015236 52.198 By matching By MS/MS 1 1 18753000 9652300 9101100 1557 1000 1717 3891;3892 3606 3606 1828 1 EVTRVLMVETHNEIYDK PEADYYAKEVTRVLMV THNEIYDKFKQSTHSI K E V D K F 0 1 1 1 0 0 3 0 1 1 1 1 1 0 0 0 2 0 1 3 0 0 17 1 2075.0357 P01137 P01137 107 123 TGFB1 Transforming growth factor beta-1;Latency-associated peptide yes yes 3 0.015182 46.027 By matching By MS/MS 1 1 134250000 67743000 66507000 1558 1516 1718 3893;3894 3607 3607 180 1 EVTSDSGSIVVSGLTPGVEYVYTIQVLR SQGGEAPREVTSDSGS VYTIQVLRDGQERDAP R E V L R D 0 1 0 1 0 1 2 3 0 2 2 0 0 0 1 4 3 0 2 6 0 0 28 0 2967.5441 P02751 P02751 1130 1157 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 3 0.00038305 60.621 By MS/MS By MS/MS 1 1 20758000 11624000 9134000 1559 1518 1719 3895;3896 3608;3609 3608 2 EVVKPVPITSPAVSK PVQKGEPKEVVKPVPI ITSPAVSKVTSTNNMA K E V S K V 1 0 0 0 0 0 1 0 0 1 0 2 0 0 3 2 1 0 0 4 0 0 15 1 1549.9079 Q96HC4;A0A0D9SFR4 Q96HC4 102 116 PDLIM5 PDZ and LIM domain protein 5 yes no 2 1.6766E-19 142.54 By MS/MS By MS/MS 1 1 11585000 5833300 5752200 1560 2500 1720 3897;3898 3610;3611 3611 5033;7004 2 EVYELLDSPGK KLYEGKTKEVYELLDS ELLDSPGKVLLQSKDQ K E V G K V 0 0 0 1 0 0 2 1 0 0 2 1 0 0 1 1 0 0 1 1 0 0 11 0 1248.6238 E9PBS1;P22234 E9PBS1 20 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 2.7192E-30 185.81 By MS/MS By MS/MS 2 3 27305000 9077500 18228000 1561 759 1721;1722 3899;3900;3901;3902;3903 3612;3613;3614;3615;3616 3612 1383;7376 5 EVYELLDSPGKVLLQSK KLYEGKTKEVYELLDS GKVLLQSKDQITAGNA K E V S K D 0 0 0 1 0 1 2 1 0 0 4 2 0 0 1 2 0 0 1 2 0 0 17 1 1917.0459 E9PBS1;P22234 E9PBS1 20 36 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2;3 2.3274E-21 138.24 By MS/MS By MS/MS 2 2 54241000 34758000 19483000 1562 759 1723 3904;3905;3906;3907 3617;3618;3619;3620 3618 1383;7376 4 EVYMTPLR QNEDEKNKEVYMTPLR EVYMTPLRGVKATQAS K E V L R G 0 1 0 0 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 1 0 0 8 0 1007.511 Q9BPX3 Q9BPX3 927 934 NCAPG Condensin complex subunit 3 yes yes 2 0.0049002 92.47 By MS/MS By MS/MS 2 2 16631000 8046000 8585200 1563 2567 1724;1725 3908;3909;3910;3911 3621;3622;3623;3624 3621 343 7867 4 EWNGVVSESDSPVK PPPKAALKEWNGVVSE SESDSPVKRPGRKAAR K E W V K R 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 3 0 1 0 3 0 0 14 0 1531.7155 M0R0Q7;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 41 54 LIG1 DNA ligase;DNA ligase 1 yes no 2 1.6004E-46 190.41 By MS/MS By MS/MS 1 1 20007000 11168000 8838500 1564 1316 1726 3912;3913 3625;3626 3626 2369 2 EYAENIGDGRSPEFR KIVRHIIKEYAENIGD DGRSPEFRENEQKRIL K E Y F R E 1 2 1 1 0 0 3 2 0 1 0 0 0 1 1 1 0 0 1 0 0 0 15 1 1738.7911 A0A087WUB9;Q8WYA6 A0A087WUB9 540 554 CTNNBL1 Beta-catenin-like protein 1 yes no 3 0.00099244 75.589 By MS/MS By MS/MS 1 1 9337000 3796500 5540500 1565 44 1727 3914;3915 3627;3628;3629 3628 74 3 EYCLSPR IRFDQLHREYCLSPRN REYCLSPRNQPRRMCL R E Y P R N 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 0 7 0 923.4171 C9JWC4;Q8NCD3 C9JWC4 359 365 HJURP Holliday junction recognition protein yes no 2 0.023733 82.645 By matching By MS/MS 1 1 5467000 2534400 2932600 1566 612 1728 3916;3917 3630 3630 1 EYDQLYEEYTR QQYQDKSREYDQLYEE QLYEEYTRTSQGLLGS R E Y T R T 0 1 0 1 0 1 3 0 0 0 1 0 0 0 0 0 1 0 3 0 0 0 11 0 1507.6467 E9PFP1;O00459 E9PFP1 459 469 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta yes no 2 3.2636E-06 142.36 By MS/MS By MS/MS 1 1 11991000 5718000 6272700 1567 783 1729 3918;3919 3631;3632 3632 7382 2 EYEEDDILASDDPSSIEQYENTR IVQESWRKEYEEDDIL IEQYENTRTYELQSKK K E Y T R T 1 1 1 4 0 1 5 0 0 2 1 0 0 0 1 3 1 0 2 0 0 0 23 0 2717.1464 Q96RS0 Q96RS0 145 167 TGS1 Trimethylguanosine synthase yes yes 2;3 0.00016727 73.722 By MS/MS By MS/MS 2 2 26411000 13742000 12669000 1568 2535 1730 3920;3921;3922;3923 3633;3634;3635;3636 3634 5111 4 EYFTFPASK IPTQTYTREYFTFPAS YFTFPASKSQDRMAPP R E Y S K S 1 0 0 0 0 0 1 0 0 0 0 1 0 2 1 1 1 0 1 0 0 0 9 0 1088.5179 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1188 1196 MLLT4 Afadin yes no 2 0.0012968 116.05 By MS/MS By MS/MS 1 1 40972000 23589000 17382000 1569 431 1731 3924;3925 3637;3638;3639;3640 3638 7267 4 EYFTFPASKSQDR IPTQTYTREYFTFPAS PASKSQDRMAPPQNQW R E Y D R M 1 1 0 1 0 1 1 0 0 0 0 1 0 2 1 2 1 0 1 0 0 0 13 1 1574.7365 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1188 1200 MLLT4 Afadin yes no 2;3 0.027493 58.098 By matching By MS/MS 1 2 4925600 2709200 2216500 1570 431 1732 3926;3927;3928 3641;3642 3641 7267 2 EYGSPLKAYTPVVVTQWYR VGDFGLAREYGSPLKA VVVTQWYRAPELLLGA R E Y Y R A 1 1 0 0 0 1 1 1 0 0 1 1 0 0 2 1 2 1 3 3 0 0 19 1 2256.1579 Q5QPR4;Q5QPR3;Q9UQ88 Q5QPR4 537 555 CDK11A Cyclin-dependent kinase 11A yes no 3 0.001599 67.563 By matching By MS/MS 1 1 12004000 7557100 4447200 1571 2084 1733 3929;3930 3643 3643 4107;7741 1 EYGSTSSIDKQGTSGESFFDLLK KTGPSLHREYGSTSSI ESFFDLLKGYKDDKSD R E Y L K G 0 0 0 2 0 1 2 3 0 1 2 2 0 2 0 5 2 0 1 0 0 0 23 1 2495.1704 O43166 O43166 205 227 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes yes 3 0.010002 47.155 By MS/MS 1 2688800 0 2688800 1572 1372 1734 3931 3644 3644 2507;2508;2509;6608 1 EYIPGQPPLSQSSDSSPTR QYKEKTGKEYIPGQPP SSDSSPTRNSEPAGLE K E Y T R N 0 1 0 1 0 2 1 1 0 1 1 0 0 0 4 5 1 0 1 0 0 0 19 0 2044.9702 P07814;V9GYZ6 P07814 871 889 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2;3 5.0163E-28 138.82 By MS/MS By MS/MS 4 3 654880000 296950000 357930000 1573 1539 1735;1736 3932;3933;3934;3935;3936;3937;3938 3645;3646;3647;3648;3649;3650;3651;3652;3653 3652 2826;2827;2828;2829;2830 9 EYIPGQPPLSQSSDSSPTRNSEPAGLETPEAK QYKEKTGKEYIPGQPP GLETPEAKVLFDKVAS K E Y A K V 2 1 1 1 0 2 4 2 0 1 2 1 0 0 6 6 2 0 1 0 0 0 32 1 3368.6008 P07814;V9GYZ6 P07814 871 902 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 3 0.008874 43.992 By MS/MS By MS/MS 1 1 184030000 80293000 103740000 1574 1539 1737 3939;3940 3654;3655 3655 2826;2827;2828;2829;2830 2 EYRQMVGKSSF EDKLKMIREYRQMVGK QMVGKSSF________ R E Y S F - 0 1 0 0 0 1 1 1 0 0 0 1 1 1 0 2 0 0 1 1 0 0 11 2 1330.634 B4DJF2 B4DJF2 84 94 YWHAE yes yes 3 0.026087 41.56 By MS/MS 1 0 0 0 1575 482 1738 3941 3656 3656 1 EYSPPYAPSHQQYPPSHATPLPK EKGHRKYREYSPPYAP SHATPLPKKAYSKMDS R E Y P K K 2 0 0 0 0 2 1 0 2 0 1 1 0 0 7 3 1 0 3 0 0 0 23 0 2591.2445 Q9UPT8 Q9UPT8 157 179 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 3 0.021219 41.136 By matching By MS/MS 1 1 15069000 4957200 10112000 1576 2870 1739 3942;3943 3657 3657 5922 1 EYVQLISVYEK EKELSKVREYVQLISV QLISVYEKKLLNLTVR R E Y E K K 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 1 0 0 2 2 0 0 11 0 1369.7129 Q6UX06 Q6UX06 122 132 OLFM4 Olfactomedin-4 yes yes 2 8.4211E-06 130.41 By MS/MS By MS/MS 1 1 12245000 6557600 5687100 1577 2170 1740 3944;3945 3658;3659 3659 2 EYVSNDAAQSDDEEKLQSQPTDTDGGRLK LHIMRRTKEYVSNDAA DTDGGRLKQKTTQLKK K E Y L K Q 2 1 1 5 0 3 3 2 0 0 2 2 0 0 1 3 2 0 1 1 0 0 29 2 3195.444 Q5JSH3;H7BY83 Q5JSH3 394 422 WDR44 WD repeat-containing protein 44 yes no 4 0.0043196 46.399 By MS/MS By MS/MS 1 1 18566000 11244000 7321400 1578 2073 1741 3946;3947 3660;3661 3660 4071 2 FAAATGATPIAGR TGQRAVLKFAAATGAT GATPIAGRFTPGTFTN K F A G R F 5 1 0 0 0 0 0 2 0 1 0 0 0 1 1 0 2 0 0 0 0 0 13 0 1202.6408 C9J9K3;A0A0C4DG17;P08865;F8WD59 C9J9K3 90 102 RPSA 40S ribosomal protein SA yes no 2 0.009339 72.2 By MS/MS By MS/MS 1 1 10083000 5654700 4428400 1579 274 1742 3948;3949 3662;3663 3662 2 FADLSEAANR AEEWYKSKFADLSEAA DLSEAANRNNDALRQA K F A N R N 3 1 1 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1092.52 P08670;B0YJC4;Q5JVS8;B0YJC5 P08670 295 304 VIM Vimentin yes no 2 5.8913E-05 121.09 By MS/MS By MS/MS 1 1 8826600 4201200 4625400 1580 1546 1743 3950;3951 3664;3665 3664 2 FAEAFEAIPR LEQYAIKKFAEAFEAI EAFEAIPRALAENSGV K F A P R A 3 1 0 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 10 0 1149.5819 P50990 P50990 441 450 CCT8 T-complex protein 1 subunit theta yes yes 2 0.00032549 112.84 By MS/MS By MS/MS 1 1 2667700 1230700 1437000 1581 1741 1744 3952;3953 3666;3667 3666 2 FAGSSPSQSSMVAR FGLARFSRFAGSSPSQ SQSSMVARTQTVRGTL R F A A R T 2 1 0 0 0 1 0 1 0 0 0 0 1 1 1 5 0 0 0 1 0 0 14 0 1410.6562 D3YTB5;P51617;H7C2I6;H7C224 D3YTB5 393 406 IRAK1 Interleukin-1 receptor-associated kinase 1 yes no 2 0.0012115 88.134 By MS/MS By matching 1 1 5593200 2242000 3351200 1582 640 1745 3954;3955 3668 3668 1160 1 FAQSAPGSPLSSQPVLITVQR LAVIQEARFAQSAPGS PVLITVQRQLPQAIKP R F A Q R Q 2 1 0 0 0 3 0 1 0 1 2 0 0 1 3 4 1 0 0 2 0 0 21 0 2182.1746 Q01167 Q01167 421 441 FOXK2 Forkhead box protein K2 yes yes 2;3 4.6852E-14 117.48 By MS/MS By MS/MS 2 2 257940000 135720000 122220000 1583 1829 1746 3956;3957;3958;3959 3669;3670;3671;3672 3669 3425 4 FARSDDEQSSADKER QMSNDKERFARSDDEQ QSSADKERLARENHSE R F A E R L 2 2 0 3 0 1 2 0 0 0 0 1 0 1 0 3 0 0 0 0 0 0 15 2 1739.7711 A6NGV6;P27540 A6NGV6 74 88 ARNT Aryl hydrocarbon receptor nuclear translocator yes no 3 0.0076711 59.709 By MS/MS By MS/MS 2 2 12097000 6589200 5508000 1584 415 1747 3960;3961;3962;3963 3673;3674;3675 3673 780 2 FASDDEHDEHDENGATGPVK QFQGKKTKFASDDEHD NGATGPVKRAREETDK K F A V K R 2 0 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 20 0 2168.8883 P05455 P05455 364 383 SSB Lupus La protein yes yes 3 0.0020206 61.985 By MS/MS By MS/MS 4 4 284920000 201710000 83210000 1585 1526 1748;1749 3964;3965;3966;3967;3968;3969;3970;3971 3676;3677;3678;3679;3680 3677 12 2813 5 FASDDEHDEHDENGATGPVKR QFQGKKTKFASDDEHD GATGPVKRAREETDKE K F A K R A 2 1 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 21 1 2324.9894 P05455 P05455 364 384 SSB Lupus La protein yes yes 3;4 5.2695E-26 130.38 By MS/MS By MS/MS 9 9 4853500000 2134000000 2719400000 1586 1526 1750;1751 3972;3973;3974;3975;3976;3977;3978;3979;3980;3981;3982;3983;3984;3985;3986;3987;3988;3989 3681;3682;3683;3684;3685;3686;3687;3688;3689;3690;3691;3692;3693 3684 12 2813 13 FASENDLPEWK KMRAKLFRFASENDLP ENDLPEWKERGTGDVK R F A W K E 1 0 1 1 0 0 2 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 11 0 1334.6143 C9JJ34;P43487;C9JDM3;F6WQW2;C9JIC6;C9JXG8;C9JGV6 C9JJ34 58 68 RANBP1 Ran-specific GTPase-activating protein yes no 2 1.0977E-09 161.87 By MS/MS By MS/MS 2 2 124900000 64436000 60468000 1587 594 1752;1753 3990;3991;3992;3993 3694;3695;3696 3694 1084 3 FASENDLPEWKER KMRAKLFRFASENDLP DLPEWKERGTGDVKLL R F A E R G 1 1 1 1 0 0 3 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 13 1 1619.758 C9JJ34;P43487;C9JDM3;F6WQW2;C9JIC6;C9JXG8;C9JGV6 C9JJ34 58 70 RANBP1 Ran-specific GTPase-activating protein yes no 2;3 6.7652E-11 131.61 By MS/MS By MS/MS 3 3 130990000 73864000 57128000 1588 594 1754;1755 3994;3995;3996;3997;3998;3999 3697;3698;3699;3700;3701 3700 1084 5 FATIKSASLVTR LHYRNRERFATIKSAS KSASLVTRQIHEHEQE R F A T R Q 2 1 0 0 0 0 0 0 0 1 1 1 0 1 0 2 2 0 0 1 0 0 12 1 1292.7452 Q9H2K8 Q9H2K8 435 446 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 2 0.0070733 74.475 By MS/MS By MS/MS 1 1 10431000 5464100 4966700 1589 2646 1756 4000;4001 3702;3703 3702 5391 2 FAVPTYAAK EVPIYANRFAVPTYAA AVPTYAAKQPQQFPSR R F A A K Q 3 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 1 1 0 0 9 0 966.51747 Q13443;A0A0J9YY58 Q13443 773 781 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes no 2 0.0010884 118.74 By MS/MS By MS/MS 1 1 31847000 17500000 14347000 1590 1917 1757 4002;4003 3704;3705 3705 7687 2 FAYTGTEMR DTSRSDSKFAYTGTEM AYTGTEMRTVAEKVDA K F A M R T 1 1 0 0 0 0 1 1 0 0 0 0 1 1 0 0 2 0 1 0 0 0 9 0 1074.4804 A0A087WZR3;H9KVA9;A0A0D9SF50;P46736 A0A087WZR3 53 61 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes no 2 0.027003 55.531 By MS/MS 1 812940 0 812940 1591 115 1758 4004 3706 3706 7172 0 FCDSPTSDLEMR RHDWAPPRFCDSPTSD PTSDLEMRNGRGRGKR R F C M R N 0 1 0 2 1 0 1 0 0 0 1 0 1 1 1 2 1 0 0 0 0 0 12 0 1456.5963 O15014 O15014 355 366 ZNF609 Zinc finger protein 609 yes yes 2 0.00014162 113.99 By MS/MS By MS/MS 1 1 8413000 4732100 3680900 1592 1351 1759 4005;4006 3707;3708 3707 2464 2 FCSNSGRLSGPAELR LPPQRQDRFCSNSGRL LSGPAELRSFNMPSLD R F C L R S 1 2 1 0 1 0 1 2 0 0 2 0 0 1 1 3 0 0 0 0 0 0 15 1 1649.7944 G3V599;O15320;Q96PC5 G3V599 1162 1176 CTAGE5;MIA2 cTAGE family member 5;Melanoma inhibitory activity protein 2 yes no 3 0.021694 47.621 By matching By MS/MS 1 1 14274000 7608200 6665600 1593 980 1760 4007;4008 3709 3709 1 FCTGLTQIETLFK NMKEVFTRFCTGLTQI TQIETLFKSKDYEFMW R F C F K S 0 0 0 0 1 1 1 1 0 1 2 1 0 2 0 0 3 0 0 0 0 0 13 0 1556.7909 P12277 P12277 253 265 CKB Creatine kinase B-type yes yes 2 0.010775 69.672 By MS/MS 1 4566700 4566700 0 1594 1571 1761 4009 3710 3710 1 FDDAVVQSDMK AKRLIGRRFDDAVVQS AVVQSDMKHWPFMVVN R F D M K H 1 0 0 3 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 0 11 0 1253.5598 P11142;E9PKE3;E9PN89;E9PNE6;E9PQQ4;E9PQK7;E9PLF4;E9PPY6;E9PN25;E9PK54 P11142 78 88 HSPA8 Heat shock cognate 71 kDa protein no no 2 8.5379E-06 143.4 By MS/MS By MS/MS 1 1 5030600 2353200 2677500 1595 1560;812 1762 4010;4011 3711;3712 3711 2 FDIYDPFHPTDEAYSPPPAPEQK PPAPPAPRFDIYDPFH PPPAPEQKYDPFEPTG R F D Q K Y 2 0 0 3 0 1 2 0 1 1 0 1 0 2 6 1 1 0 2 0 0 0 23 0 2660.2071 Q9H7N4 Q9H7N4 225 247 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 3 5.8063E-14 101.49 By MS/MS By MS/MS 1 1 77852000 43587000 34264000 1596 2675 1763 4012;4013 3713;3714 3713 5456 2 FDLMYAK AWARLDHKFDLMYAKR KFDLMYAKRAFVHWYV K F D A K R 1 0 0 1 0 0 0 0 0 0 1 1 1 1 0 0 0 0 1 0 0 0 7 0 886.42588 P68363;F5H5D3;Q9BQE3;Q71U36;Q6PEY2;Q13748;P68366;C9J2C0;Q9NY65;V9GZ17;A6NHL2 P68363 395 401 TUBA1B;TUBA1C;TUBA1A;TUBA3E;TUBA3C;TUBA4A;TUBA8;TUBAL3 Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain;Tubulin alpha-4A chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3 yes no 2 0.024946 60.788 By MS/MS 1 0 0 0 1597 1810 1764 4014 3715 3715 1 FDQLFDDESDPFEVLK FGCVVTNRFDQLFDDE SDPFEVLKAAENKKKE R F D L K A 0 0 0 4 0 1 2 0 0 0 2 1 0 3 1 1 0 0 0 1 0 0 16 0 1942.8836 Q8NC51 Q8NC51 17 32 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.00022121 90.379 By MS/MS By MS/MS 1 1 15462000 12261000 3201400 1598 2335 1765 4015;4016 3716;3717 3716 4674 2 FDSNEEDSASVFSPSFGLK KSEDDSAKFDSNEEDS FSPSFGLKQTDKVPSK K F D L K Q 1 0 1 2 0 0 2 1 0 0 1 1 0 3 1 5 0 0 0 1 0 0 19 0 2061.9167 Q02880 Q02880 1464 1482 TOP2B DNA topoisomerase 2-beta yes yes 2 0.031267 63.578 By MS/MS 1 0 0 0 1599 1842 1766 4017 3718 3718 3446;3447 1 FDSPRGPPPPR QVPSPCCRFDSPRGPP PRGPPPPRLGLLGALM R F D P R L 0 2 0 1 0 0 0 1 0 0 0 0 0 1 5 1 0 0 0 0 0 0 11 1 1221.6255 A0A087X0R7;Q9H4L4 A0A087X0R7 116 126 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 0.022574 52.167 By MS/MS 1 1731500 0 1731500 1600 132 1767 4018 3719 3719 1 FDTGNLCMVTGGANLGR GKITDFIKFDTGNLCM TGGANLGRIGVITNRE K F D G R I 1 1 2 1 1 0 0 4 0 0 2 0 1 1 0 0 2 0 0 1 0 0 17 0 1781.8189 P62701 P62701 175 191 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 0.0105 62.338 By MS/MS 1 1769100 1769100 0 1601 1798 1768 4019 3720 3720 1 FEDENFILK GKSIYGEKFEDENFIL EDENFILKHTGPGILS K F E L K H 0 0 1 1 0 0 2 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1153.5655 P62937;F8WE65;C9J5S7 P62937 83 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 2 0.0030434 143.73 By MS/MS By MS/MS 1 1 4317000 2341600 1975400 1602 1806 1769 4020;4021 3721;3722 3722 2 FEEESKEPVADEEEEDSDDDVEPITEFR LYVMVNAKFEEESKEP VEPITEFRFVPSDKSA K F E F R F 1 1 0 5 0 0 10 0 0 1 0 1 0 2 2 2 1 0 0 2 0 0 28 1 3313.3794 P54105;E9PJF4 P54105 86 113 CLNS1A Methylosome subunit pICln yes no 3;4 5.5267E-34 120.85 By MS/MS By MS/MS 2 2 3295700000 1633200000 1662600000 1603 1766 1770 4022;4023;4024;4025 3723;3724;3725;3726 3724 3332 4 FEEKCGDNGSIVGRNQSYPGEK ________________ NQSYPGEKHQPKGKPI K F E E K H 0 1 2 1 1 1 3 4 0 1 0 2 0 1 1 2 0 0 1 1 0 0 22 2 2470.1183 A8MWK0 A8MWK0 3 24 FADS2P1 Putative fatty acid desaturase 2-like protein FADS2P1 yes yes 3 0.0081364 52.298 By MS/MS By matching 1 1 6972600 3199400 3773300 1604 435 1771 4026;4027 3727 3727 826 1 FEELNADLFR YTSITRARFEELNADL ELNADLFRGTLDPVEK R F E F R G 1 1 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 10 0 1252.6088 P11142;E9PKE3;E9PN89;E9PNE6;P54652;A8K7Q2 P11142 302 311 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 0.00031244 113.22 By MS/MS By MS/MS 1 1 3487900 1794300 1693600 1605 1560 1772 4028;4029 3728;3729 3729 2 FEEVEEEPEVIPGPPSESPGMLTK VKKRRIPRFEEVEEEP ESPGMLTKLQIKQMME R F E T K L 0 0 0 0 0 0 7 2 0 1 1 1 1 1 5 2 1 0 0 2 0 0 24 0 2626.236 O43395 O43395 116 139 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 3 0.0037598 50.255 By MS/MS By matching 1 1 7243000 5029800 2213200 1606 1382 1773 4030;4031 3730 3730 2529;2530 1 FEPESPGFESR EFEPQSPRFEPESPGF ESPGFESRSPGLVPPS R F E S R S 0 1 0 0 0 0 3 1 0 0 0 0 0 2 2 2 0 0 0 0 0 0 11 0 1280.5673 H3BS42;Q9H5H4 H3BS42 48 58 ZNF768 Zinc finger protein 768 yes no 2 0.0005724 107.39 By MS/MS By MS/MS 1 1 42299000 21390000 20909000 1607 1139 1774 4032;4033 3731;3732;3733 3731 2076 3 FERPMDYYEDLK NNVENLNRFERPMDYY MDYYEDLKMGMKFVSD R F E L K M 0 1 0 2 0 0 2 0 0 0 1 1 1 1 1 0 0 0 2 0 0 0 12 1 1604.7181 Q9NQS3 Q9NQS3 504 515 PVRL3 Nectin-3 yes yes 2 0.010442 65.5 By MS/MS By matching 1 1 10115000 5835700 4279200 1608 2711 1775 4034;4035 3734 3734 7901;7902 1 FESPATGILSPR MYGPPALRFESPATGI ATGILSPRGDDYFNYN R F E P R G 1 1 0 0 0 0 1 1 0 1 1 0 0 1 2 2 1 0 0 0 0 0 12 0 1273.6667 P49792 P49792 946 957 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.00065039 106.55 By MS/MS By MS/MS 1 1 9064300 4644900 4419400 1609 1730 1776 4036;4037 3735;3736 3736 3262 2 FESPEVAER SKGCGVVKFESPEVAE ESPEVAERACRMMNGM K F E E R A 1 1 0 0 0 0 3 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1062.4982 A0A087X0X3;P52272 A0A087X0X3 699 707 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.030584 68.371 By MS/MS 1 0 0 0 1610 135 1777 4038 3737 3737 239 1 FFCSSDSTDCVSNK VVPGTRSRFFCSSDST STDCVSNKVSIQPLDE R F F N K V 0 0 1 2 2 0 0 0 0 0 0 1 0 2 0 4 1 0 0 1 0 0 14 0 1652.6447 Q9UQ84 Q9UQ84 506 519 EXO1 Exonuclease 1 yes yes 2 0.00091656 92.457 By MS/MS By MS/MS 1 1 5178200 3047600 2130600 1611 2879 1778 4039;4040 3738;3739 3738 6008 2 FFDSEDEDFEILSL SDVERLERFFDSEDED EDFEILSL________ R F F S L - 0 0 0 3 0 0 3 0 0 1 2 0 0 3 0 2 0 0 0 0 0 0 14 0 1704.7407 Q9Y4P1 Q9Y4P1 380 393 ATG4B Cysteine protease ATG4B yes yes 2 0.0021679 80.871 By matching By MS/MS 1 1 7149700 4950000 2199800 1612 2922 1779 4041;4042 3740 3740 6076 1 FFGNSWAETYR DGKQPVGRFFGNSWAE NSWAETYRNRFWKEHH R F F Y R N 1 1 1 0 0 0 1 1 0 0 0 0 0 2 0 1 1 1 1 0 0 0 11 0 1376.6149 H3BLU7;O43488 H3BLU7 206 216 AKR7A2 Aflatoxin B1 aldehyde reductase member 2 yes no 2 0.0023565 90.434 By MS/MS By MS/MS 1 1 2465100 1361700 1103400 1613 1109 1780 4043;4044 3741;3742 3742 2036 2 FFTPSPDGR GLIDGLTKFFTPSPDG FTPSPDGRKARGEVVD K F F G R K 0 1 0 1 0 0 0 1 0 0 0 0 0 2 2 1 1 0 0 0 0 0 9 0 1022.4821 Q92794;A5PLL3;Q8WYB5 Q92794 416 424 KAT6A;MYST3;KAT6B Histone acetyltransferase KAT6A;Histone acetyltransferase;Histone acetyltransferase KAT6B yes no 2 0.028892 60.691 By matching By MS/MS 1 1 4029700 2740100 1289600 1614 2438 1781 4045;4046 3743 3743 1 FFTSSTSLTLK STTPVAERFFTSSTSL SSTSLTLKHAAWYPSE R F F L K H 0 0 0 0 0 0 0 0 0 0 2 1 0 2 0 3 3 0 0 0 0 0 11 0 1230.6496 J3KMX1;Q99567;I3L245 J3KMX1 103 113 NUP88 Nuclear pore complex protein Nup88 yes no 2 0.019947 62.694 By MS/MS 1 1401700 1401700 0 1615 1218 1782 4047 3744 3744 2208 1 FFTTPSK TPKKPEAKFFTTPSKS KFFTTPSKSVRKASHT K F F S K S 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 1 2 0 0 0 0 0 7 0 826.4225 O76021 O76021 462 468 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 2 0.019905 149.57 By matching By MS/MS 1 1 19752000 10051000 9701200 1616 1454 1783 4048;4049 3745 3745 1 FFTTPSKSVR TPKKPEAKFFTTPSKS TTPSKSVRKASHTPKK K F F V R K 0 1 0 0 0 0 0 0 0 0 0 1 0 2 1 2 2 0 0 1 0 0 10 1 1168.6241 O76021 O76021 462 471 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 2 0.012098 78.287 By MS/MS By MS/MS 1 1 18905000 11833000 7072300 1617 1454 1784 4050;4051 3746;3747 3746 2690 2 FGESEEVEMEVESDEEDDKQEK LIQERYEKFGESEEVE EEDDKQEKAEEPPSQL K F G E K A 0 0 0 3 0 1 9 1 0 0 0 2 1 1 0 2 0 0 0 2 0 0 22 1 2616.0545 Q15459;H7C1L2 Q15459 317 338 SF3A1 Splicing factor 3A subunit 1 yes no 3 0.002895 55.247 By MS/MS By MS/MS 1 1 49598000 25403000 24195000 1618 1991 1785 4052;4053 3748;3749 3749 3886 2 FGEVVDCTLK DLKDYFSKFGEVVDCT EVVDCTLKLDPITGRS K F G L K L 0 0 0 1 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1166.5642 D6RAF8;Q14103;D6RD83;D6RF44;H0YA96;H0Y8G5;D6RBQ9 D6RAF8 120 129 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.0028006 102.07 By MS/MS By MS/MS 2 2 8279900 4389000 3890900 1619 650 1786 4054;4055;4056;4057 3750;3751;3752;3753 3752 3 FGEYNSNMSPEEK SNVFRDKRFGEYNSNM SNMSPEEKMMKRFALE R F G E K M 0 0 2 0 0 0 3 1 0 0 0 1 1 1 1 2 0 0 1 0 0 0 13 0 1530.6297 E9PFK5;P78316 E9PFK5 88 100 NOP14 Nucleolar protein 14 yes no 2 3.1387E-21 167.18 By MS/MS By MS/MS 2 2 156800000 89776000 67021000 1620 781 1787;1788 4058;4059;4060;4061 3754;3755;3756;3757 3757 95 1406 4 FGGSGSQVDSAR KTHLENNRFGGSGSQV GSQVDSARMNLASSFV R F G A R M 1 1 0 1 0 1 0 3 0 0 0 0 0 1 0 3 0 0 0 1 0 0 12 0 1166.5316 Q13200 Q13200 358 369 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes yes 2 0.014252 64.439 By MS/MS By matching 1 1 3366900 1593900 1773000 1621 1903 1789 4062;4063 3758 3758 3640 1 FGQAATMEGIGAIGGTPPAFNR LTPPTTERFGQAATME GTPPAFNRAAPGAEFA R F G N R A 4 1 1 0 0 1 1 5 0 2 0 0 1 2 2 0 2 0 0 0 0 0 22 0 2162.0579 Q15233 Q15233 435 456 NONO Non-POU domain-containing octamer-binding protein yes yes 2;3 1.996E-19 126.04 By MS/MS By MS/MS 3 5 384920000 196970000 187950000 1622 1980 1790;1791 4064;4065;4066;4067;4068;4069;4070;4071 3759;3760;3761;3762;3763;3764 3762 266 6830 6 FGSADNIAHLK FANLIRNKFGSADNIA ADNIAHLKNSLEEFRP K F G L K N 2 0 1 1 0 0 0 1 1 1 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1171.5986 G3V207;G5E963;A0A1B0GUZ3;A0A0C4DFR1;Q9ULS5;O75069 G3V207 183 193 TMCC3;TMCC2 Transmembrane and coiled-coil domains protein 3;Transmembrane and coiled-coil domains protein 2 yes no 2 0.00085935 104.17 By MS/MS By MS/MS 1 1 4755500 2930900 1824700 1623 266 1792 4072;4073 3765;3766 3765 484 2 FGSNINLEADES LKVQLYAKFGSNINLE INLEADES________ K F G E S - 1 0 2 1 0 0 2 1 0 1 1 0 0 1 0 2 0 0 0 0 0 0 12 0 1294.5677 Q9NQP4 Q9NQP4 123 134 PFDN4 Prefoldin subunit 4 yes yes 2 0.004221 76.588 By MS/MS By matching 1 1 9709900 5113300 4596500 1624 2709 1793 4074;4075 3767 3767 5525 1 FHPEPYGLEDDQR GSSVDLHRFHPEPYGL YGLEDDQRSMGYDDLD R F H Q R S 0 1 0 2 0 1 2 1 1 0 1 0 0 1 2 0 0 0 1 0 0 0 13 0 1601.711 C9JZR2;O60716;E9PRE2 C9JZR2 275 287 CTNND1 Catenin delta-1 yes no 2 0.00076655 96.113 By MS/MS By MS/MS 1 1 19579000 11803000 7776100 1625 624 1794 4076;4077 3768;3769 3768 7332 2 FHSPSTTWSPNKDTPQEK KPRTRRSRFHSPSTTW NKDTPQEKKRPQSPSP R F H E K K 0 0 1 1 0 1 1 0 1 0 0 2 0 1 3 3 3 1 0 0 0 0 18 1 2085.9756 A0A0A0MTP7;F8VXG7;Q99590 A0A0A0MTP7 734 751 SCAF11 Protein SCAF11 yes no 3 0.0021115 64.522 By MS/MS By MS/MS 1 1 36213000 21395000 14818000 1626 251 1795 4078;4079 3770;3771;3772;3773 3771 454;6291 4 FICVTPTTCSNTIDLPMSPR AAPYLKTKFICVTPTT IDLPMSPRTLDSLMQF K F I P R T 0 1 1 1 2 0 0 0 0 2 1 0 1 1 3 2 4 0 0 1 0 0 20 0 2309.0854 G8JLH9;P40763 G8JLH9 612 631 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 yes no 2;3 0.00176 67.997 By MS/MS By MS/MS 3 3 47834000 27593000 20241000 1627 1004 1796;1797 4080;4081;4082;4083;4084;4085 3774;3775;3776;3777 3777 117 1832 4 FIEIAAR RAPQCLGKFIEIAARK KFIEIAARKKRNFILD K F I A R K 2 1 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 7 0 818.46504 Q00839 Q00839 566 572 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.011266 106.76 By MS/MS By MS/MS 1 1 5363500 2747500 2616000 1628 1827 1798 4086;4087 3778;3779 3779 2 FIGQYGNGLK KKRLSTLKFIGQYGNG GQYGNGLKSGSMRIGK K F I L K S 0 0 1 0 0 1 0 3 0 1 1 1 0 1 0 0 0 0 1 0 0 0 10 0 1095.5713 Q86VD1 Q86VD1 95 104 MORC1 MORC family CW-type zinc finger protein 1 yes yes 2 0.0057387 71.342 By MS/MS By matching 1 1 9166500 5178300 3988200 1629 2242 1799 4088;4089 3780 3780 7771 1 FIGSPRTPVSPVK PKIRSPRRFIGSPRTP RTPVSPVKFSPGDFWG R F I V K F 0 1 0 0 0 0 0 1 0 1 0 1 0 1 3 2 1 0 0 2 0 0 13 1 1383.7874 P23443 P23443 438 450 RPS6KB1 Ribosomal protein S6 kinase beta-1 yes yes 2 0.00093245 89.136 By MS/MS 1 0 0 0 1630 1623 1800 4090 3781 3781 3001;6687 1 FIHQQPQSSSPVYGSSAK QWQPSSSRFIHQQPQS PVYGSSAKTSSVSNPQ R F I A K T 1 0 0 0 0 3 0 1 1 1 0 1 0 1 2 5 0 0 1 1 0 0 18 0 1946.9486 F5GZ78;A0A1B0GTU4;P49023;F5H836;A0A1B0GU60 F5GZ78 74 91 PXN Paxillin yes no 2;3 1.1723E-19 130.87 By MS/MS By MS/MS 4 4 103600000 55202000 48394000 1631 367 1801;1802 4091;4092;4093;4094;4095;4096;4097;4098 3782;3783;3784;3785;3786;3787;3788 3784 681;7252 7 FIIGSVSEDNSEDEISNLVK LELNQHSRFIIGSVSE DEISNLVKLDLLEEKE R F I V K L 0 0 2 2 0 0 3 1 0 3 1 1 0 1 0 4 0 0 0 2 0 0 20 0 2194.0641 A0A0C4DGT1;Q13085;A0A087X2F8;A0A087X126;A0A087WYK6 A0A0C4DGT1 19 38 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 2 4.3389E-34 140.35 By MS/MS By MS/MS 1 1 39629000 22080000 17549000 1632 298 1803 4099;4100 3789;3790;3791 3790 532 3 FIQELSGSSPK QQNTQLKRFIQELSGS ELSGSSPKRRRAEDKD R F I P K R 0 0 0 0 0 1 1 1 0 1 1 1 0 1 1 3 0 0 0 0 0 0 11 0 1191.6136 I3L254;Q01664 I3L254 56 66 TFAP4 Transcription factor AP-4 yes no 2 1.0024E-14 171.32 By MS/MS By MS/MS 1 1 124280000 76301000 47982000 1633 1203 1804 4101;4102 3792;3793 3792 2183;2184 2 FIQELSGSSPKR QQNTQLKRFIQELSGS LSGSSPKRRRAEDKDE R F I K R R 0 1 0 0 0 1 1 1 0 1 1 1 0 1 1 3 0 0 0 0 0 0 12 1 1347.7147 I3L254;Q01664 I3L254 56 67 TFAP4 Transcription factor AP-4 yes no 2;3 1.9579E-13 156.14 By MS/MS By MS/MS 2 2 25429000 13769000 11660000 1634 1203 1805 4103;4104;4105;4106 3794;3795;3796 3796 2183;2184 3 FIQENVFVAANHNGSPLSIK ETVGRVKRFIQENVFV NGSPLSIKEAPKELSF R F I I K E 2 0 3 0 0 1 1 1 1 2 1 1 0 2 1 2 0 0 0 2 0 0 20 0 2184.1328 E9PFD2;P11172 E9PFD2 200 219 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase yes no 3 0.0067368 51.225 By MS/MS By matching 1 1 8514100 6851500 1662700 1635 777 1806 4107;4108 3797 3797 1404 1 FIQWLKEAEEESSEDD RKNQQLQRFIQWLKEA EEESSEDD________ R F I D D - 1 0 0 2 0 1 5 0 0 1 1 1 0 1 0 2 0 1 0 0 0 0 16 1 1953.848 Q13144 Q13144 706 721 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 2 0.00087091 97.45 By matching By MS/MS 1 1 87141000 51297000 35844000 1636 1900 1807 4109;4110 3798 3798 3632;3633 1 FITLLLPGGAQTAVRPGSPSTSTMR VLAANPNRFITLLLPG SPSTSTMRLDLQFQAI R F I M R L 2 2 0 0 0 1 0 3 0 1 3 0 1 1 3 3 4 0 0 1 0 0 25 1 2557.3686 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1333 1357 TRRAP Transformation/transcription domain-associated protein yes no 3 0.00024185 60.602 By MS/MS By MS/MS 2 2 16661000 9316500 7344500 1637 850 1808;1809 4111;4112;4113;4114 3799;3800;3801;3802 3799 101 1534;1535;6458;6459;6460 4 FIYEAWQGVER PAHEENVRFIYEAWQG EAWQGVERDLRGQVPG R F I E R D 1 1 0 0 0 1 2 1 0 1 0 0 0 1 0 0 0 1 1 1 0 0 11 0 1396.6776 I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L2L5 34 44 FAM195B Protein FAM195B yes no 2 3.119E-15 172.27 By MS/MS By MS/MS 1 1 18058000 11140000 6917900 1638 599 1810 4115;4116 3803;3804 3804 7322 2 FIYGNQDLFATSQSK AMQQFNQRFIYGNQDL LFATSQSKEFDPLGPL R F I S K E 1 0 1 1 0 2 0 1 0 1 1 1 0 2 0 2 1 0 1 0 0 0 15 0 1717.8312 Q96J02 Q96J02 418 432 ITCH E3 ubiquitin-protein ligase Itchy homolog yes yes 2 0.0051458 68.515 By MS/MS By matching 1 1 4351100 2045800 2305300 1639 2504 1811 4117;4118 3805 3805 7846 0 FKAEAPLPSPK EFDIKSPKFKAEAPLP EAPLPSPKLEGELQAP K F K P K L 2 0 0 0 0 0 1 0 0 0 1 2 0 1 3 1 0 0 0 0 0 0 11 1 1183.6601 Q09666 Q09666 5102 5112 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.025176 63.16 By MS/MS By MS/MS 1 1 7386900 3817300 3569600 1640 1871 1812 4119;4120 3806;3807 3807 2 FKIDSNISPK KKMKTSCKFKIDSNIS IDSNISPKKDSKEFTQ K F K P K K 0 0 1 1 0 0 0 0 0 2 0 2 0 1 1 2 0 0 0 0 0 0 10 1 1147.6237 Q9H501 Q9H501 146 155 ESF1 ESF1 homolog yes yes 2;3 2.8861E-05 126.5 By MS/MS By matching 2 1 102830000 51796000 51037000 1641 2664 1813 4121;4122;4123 3808;3809;3810 3809 5432 3 FLADEDREPGSSASSDTEEDSLPANK FPNRSGSRFLADEDRE EDSLPANKCKKEIMVG R F L N K C 3 1 1 4 0 0 4 1 0 0 2 1 0 1 2 5 1 0 0 0 0 0 26 1 2766.2104 Q8N344 Q8N344 167 192 MIER2 Mesoderm induction early response protein 2 yes yes 3 0.0047204 48.867 By matching By MS/MS 1 1 6106600 2687100 3419500 1642 2302 1814 4124;4125 3811 3811 4624;4625 1 FLDTSHYSTAGSSSVR TNLPTPRKFLDTSHYS TAGSSSVREINLQDIK K F L V R E 1 1 0 1 0 0 0 1 1 0 1 0 0 1 0 5 2 0 1 1 0 0 16 0 1713.7958 Q96A65 Q96A65 241 256 EXOC4 Exocyst complex component 4 yes yes 3 0.00039114 83.823 By MS/MS By matching 1 1 4923900 2579500 2344400 1643 2455 1815 4126;4127 3812 3812 6993;7832 1 FLEDDTSDPTYTSALGGK VSDFGLSRFLEDDTSD YTSALGGKIPIRWTAP R F L G K I 1 0 0 3 0 0 1 2 0 0 2 1 0 1 1 2 3 0 1 0 0 0 18 0 1915.8687 B1AKC9;P29323 B1AKC9 765 782 EPHB2 Receptor protein-tyrosine kinase;Ephrin type-B receptor 2 yes no 2 0.0027933 71.558 By MS/MS By MS/MS 1 1 12075000 5060900 7014200 1644 455 1816 4128;4129 3813;3814 3813 6342;7276 2 FLEENSSDPTYTSSLGGK VSDFGLSRFLEENSSD YTSSLGGKIPIRWTAP R F L G K I 0 0 1 1 0 0 2 2 0 0 2 1 0 1 1 4 2 0 1 0 0 0 18 0 1930.8796 Q96L35;P54760 Q96L35 764 781 EPHB4 Receptor protein-tyrosine kinase;Ephrin type-B receptor 4 yes no 2 3.1532E-05 85.837 By MS/MS By MS/MS 1 1 14082000 6770800 7311600 1645 1768 1817 4130;4131 3815;3816 3816 3335;3336;3337;3338;6737;6738;7644 2 FLEENSSDPTYTSSLGGKIPIR VSDFGLSRFLEENSSD LGGKIPIRWTAPEAIA R F L I R W 0 1 1 1 0 0 2 2 0 2 2 1 0 1 2 4 2 0 1 0 0 0 22 1 2410.2016 Q96L35;P54760 Q96L35 764 785 EPHB4 Receptor protein-tyrosine kinase;Ephrin type-B receptor 4 yes no 3 1.5008E-08 85.737 By MS/MS By MS/MS 2 2 33404000 18404000 15000000 1646 1768 1818;1819 4132;4133;4134;4135 3817;3818;3819;3820 3819 3335;3336;3337;3338;6737;6738;7644 4 FLEESVSMSPEER ESGSTLKKFLEESVSM VSMSPEERARYLENYD K F L E R A 0 1 0 0 0 0 4 0 0 0 1 0 1 1 1 3 0 0 0 1 0 0 13 0 1538.6923 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 86 98 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes no 2 0.0054963 79.148 By MS/MS 1 0 0 0 1647 23 1820 4136 3821 3821 5 48;49 1 FLENGSQEDLLHGNPGSTYLASNSTSAPNWK SQAGTSQRFLENGSQE STSAPNWKSLTSWTND R F L W K S 2 0 4 1 0 1 2 3 1 0 4 1 0 1 2 5 2 1 1 0 0 0 31 0 3333.5538 C9J6P4;Q7Z2W4 C9J6P4 330 360 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 3 0.0047632 47.537 By matching By MS/MS 1 1 11547000 6640500 4906800 1648 565 1821 4137;4138 3822 3822 1038;6369 1 FLESAAADFSDEDEDDDVDGREK ASVLDNFKFLESAAAD DDVDGREKSVIDTSTI K F L E K S 3 1 0 7 0 0 4 1 0 0 1 1 0 2 0 2 0 0 0 1 0 0 23 1 2574.0518 O43815 O43815 236 258 STRN Striatin yes yes 2;3 0.0028398 58.21 By MS/MS By MS/MS 2 2 124490000 65272000 59219000 1649 1395 1822 4139;4140;4141;4142 3823;3824;3825 3824 2563;2564 3 FLESPSR FNHPAIKKFLESPSRS KFLESPSRSSSPANQR K F L S R S 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 7 0 834.42357 Q9ULM3 Q9ULM3 115 121 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0086502 101.46 By MS/MS By MS/MS 1 2 9154500 4667000 4487400 1650 2853 1823 4143;4144;4145 3826;3827;3828 3828 5870 3 FLETDSEEEQEEVNEK DRFRMDSRFLETDSEE EQEEVNEKKTAEEEEL R F L E K K 0 0 1 1 0 1 7 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 16 0 1953.8327 Q76FK4;F8WE42;F5H101 Q76FK4 885 900 NOL8 Nucleolar protein 8 yes no 2 0.0021651 71.344 By matching By MS/MS 1 1 6722300 3758900 2963400 1651 2194 1824 4146;4147 3829 3829 4369;6926 1 FLETDSEEEQEEVNEKK DRFRMDSRFLETDSEE QEEVNEKKTAEEEELA R F L K K T 0 0 1 1 0 1 7 0 0 0 1 2 0 1 0 1 1 0 0 1 0 0 17 1 2081.9277 Q76FK4;F8WE42;F5H101 Q76FK4 885 901 NOL8 Nucleolar protein 8 yes no 3 0.0017621 64.565 By MS/MS By MS/MS 1 1 6315800 3313300 3002500 1652 2194 1825 4148;4149 3830;3831 3830 4369;6926 2 FLKVPVPESPAFSR PSPRPSTRFLKVPVPE PESPAFSRHADPAHQL R F L S R H 1 1 0 0 0 0 1 0 0 0 1 1 0 2 3 2 0 0 0 2 0 0 14 1 1572.8664 A4D1S0 A4D1S0 150 163 KLRG2 Killer cell lectin-like receptor subfamily G member 2 yes yes 3 0.00051878 89.846 By MS/MS By MS/MS 1 1 4947300 2669200 2278100 1653 405 1826 4150;4151 3832;3833;3834;3835 3834 772;773 4 FLLADNLYCK STNSMETRFLLADNLY LADNLYCKASVPPTDK R F L C K A 1 0 1 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 10 0 1255.6271 B4DWR3;P61758 B4DWR3 100 109 VBP1 Prefoldin subunit 3 yes no 2 3.3322E-14 170.3 By MS/MS By MS/MS 1 1 9502000 5668900 3833100 1654 496 1827 4152;4153 3836;3837 3837 7294 2 FLLGPPQGGSPR ASPPHPCRFLLGPPQG PPQGGSPRGSHHTSGS R F L P R G 0 1 0 0 0 1 0 3 0 0 2 0 0 1 3 1 0 0 0 0 0 0 12 0 1224.6615 Q8IY92 Q8IY92 1035 1046 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2 0.0081379 69.846 By MS/MS By MS/MS 1 1 6775000 3937600 2837400 1655 2287 1828 4154;4155 3838;3839 3838 4588 2 FLMECRNSPVTK TRIIYDRKFLMECRNS CRNSPVTKTPPRDLPT K F L T K T 0 1 1 0 1 0 1 0 0 0 1 1 1 1 1 1 1 0 0 1 0 0 12 1 1480.7167 Q13541 Q13541 58 69 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 2;3 3.4303E-27 177.36 By MS/MS By MS/MS 1 2 52458000 24088000 28371000 1656 1922 1829 4156;4157;4158 3840;3841;3842 3840 3709;6800 3 FLMPEAYPSSPR PSENMDSRFLMPEAYP EAYPSSPRKALRRIRQ R F L P R K 1 1 0 0 0 0 1 0 0 0 1 0 1 1 3 2 0 0 1 0 0 0 12 0 1393.67 O43166 O43166 153 164 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes yes 2 0.0011535 100.38 By MS/MS By MS/MS 1 1 9828000 5056200 4771800 1657 1372 1830 4159;4160 3843;3844 3844 2510;2511 2 FLPLFDR MAGQAFRKFLPLFDRV KFLPLFDRVLVERSAA K F L D R V 0 1 0 1 0 0 0 0 0 0 2 0 0 2 1 0 0 0 0 0 0 0 7 0 906.49634 B8ZZL8;S4R3N1;P61604 B8ZZL8 9 15 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial yes no 2 0.024007 128.38 By MS/MS By matching 1 1 6065400 2518600 3546700 1658 532 1831 4161;4162 3845 3845 1 FLQEHGSDSFLAEHK LPKKDIIKFLQEHGSD DSFLAEHKLLGNIKNV K F L H K L 1 0 0 1 0 1 2 1 2 0 2 1 0 2 0 2 0 0 0 0 0 0 15 0 1743.8216 Q00688 Q00688 28 42 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 yes yes 3 0.00015416 95.554 By MS/MS By MS/MS 1 1 8589700 3650200 4939600 1659 1826 1832 4163;4164 3846;3847 3847 3418 2 FLSHSTDSLNK ENMSNTWKFLSHSTDS HSTDSLNKISKVNEST K F L N K I 0 0 1 1 0 0 0 0 1 0 2 1 0 1 0 3 1 0 0 0 0 0 11 0 1247.6146 Q12802;A0A087WTD7;A8MYJ1;A0A087WY36 Q12802 1925 1935 AKAP13 A-kinase anchor protein 13 yes no 2 1.6588E-06 148.13 By MS/MS By MS/MS 1 1 20770000 10404000 10366000 1660 1877 1833 4165;4166 3848;3849 3849 3557;6777 2 FLSTKLKTLPDEVLTK ________________ LPDEVLTKEVEELILT K F L T K E 0 0 0 1 0 0 1 0 0 0 4 3 0 1 1 1 3 0 0 1 0 0 16 2 1832.0659 H0YER7;G3V1C3;Q9BZZ5 H0YER7 4 19 API5 Apoptosis inhibitor 5 yes no 2 0.0028647 60.691 By MS/MS By matching 1 1 9375400 6361400 3014000 1661 959 1834 4167;4168 3850 3850 1746;6483;6484;6485 1 FMVPGGTMK WAGGAGQRFMVPGGTM MVPGGTMKSLKKDSRL R F M M K S 0 0 0 0 0 0 0 2 0 0 0 1 2 1 1 0 1 0 0 1 0 0 9 0 966.46669 C9JZX1;C9JXR6;H0Y7R1 C9JZX1 37 45 MYCBPAP yes no 2 0.0075825 73.985 By MS/MS 1 0 0 0 1662 616 1835 4169 3851 3851 65 6383 1 FNDPSGCAPSPGAYDVK FPKAPLKRFNDPSGCA SPGAYDVKTLEVLKGP R F N V K T 2 0 1 2 1 0 0 2 0 0 0 1 0 1 3 2 0 0 1 1 0 0 17 0 1780.7726 O75330 O75330 11 27 HMMR Hyaluronan mediated motility receptor yes yes 2 0.0064661 61.477 By matching By MS/MS 1 1 11437000 6590800 4846300 1663 1432 1836 4170;4171 3852 3852 2641 1 FNDSEGDDTEETEDYRQFR DKESGKQKFNDSEGDD TEDYRQFRKSVLADQG K F N F R K 0 2 1 4 0 1 4 1 0 0 0 0 0 2 0 1 2 0 1 0 0 0 19 1 2351.9414 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 394 412 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.00052717 72.662 By MS/MS By matching 1 1 26949000 15189000 11759000 1664 2759 1837 4172;4173 3853 3853 5646 1 FNISSHNQSPK HSFSGVQRFNISSHNQ SSHNQSPKRHSISHSP R F N P K R 0 0 2 0 0 1 0 0 1 1 0 1 0 1 1 3 0 0 0 0 0 0 11 0 1257.6102 Q9H1A4 Q9H1A4 369 379 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 2 0.0021275 91.845 By matching By MS/MS 1 1 11476000 5357000 6119300 1665 2635 1838 4174;4175 3854 3854 5365 1 FNSYDISR TPVTKLQRFNSYDISR FNSYDISRDTLYVSKC R F N S R D 0 1 1 1 0 0 0 0 0 1 0 0 0 1 0 2 0 0 1 0 0 0 8 0 1000.4614 B4DFB6;Q6IQ26 B4DFB6 167 174 DENND5A DENN domain-containing protein 5A yes no 2 0.01586 77.597 By MS/MS By matching 1 1 6378600 2512500 3866000 1666 480 1839 4176;4177 3855 3855 909 1 FNVWDTAGQEK HTNRGPIKFNVWDTAG WDTAGQEKFGGLRDGY K F N E K F 1 0 1 1 0 1 1 1 0 0 0 1 0 1 0 0 1 1 0 1 0 0 11 0 1293.599 B5MDF5;J3KQE5;P62826;F5H018;H0YFC6 B5MDF5 61 71 RAN GTP-binding nuclear protein Ran yes no 2 0.0036415 92.239 By matching By MS/MS 1 1 5821400 2047200 3774200 1667 506 1840 4178;4179 3856 3856 1 FPDRLAEDEGDSEPEAVGQSR YVRRKRKKFPDRLAED PEAVGQSRGRRQKK__ K F P S R G 2 2 0 3 0 1 4 2 0 0 1 0 0 1 2 2 0 0 0 1 0 0 21 1 2303.0302 Q9UIG0 Q9UIG0 1457 1477 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 3 0.0038522 55.049 By MS/MS By MS/MS 1 1 21675000 12881000 8793400 1668 2817 1841 4180;4181 3857;3858 3858 5789 2 FPFCYSTPNASWCNQTR FSDPIRHKFPFCYSTP ASWCNQTRMLTSTPAP K F P T R M 1 1 2 0 2 1 0 0 0 0 0 0 0 2 2 2 2 1 1 0 0 0 17 0 2134.8989 P60608 P60608 329 345 ERVFC1-1 Endogenous retrovirus group FC1 member 1 Env polyprotein;Surface protein;Truncated transmembrane protein yes yes 2 0.030211 43.084 By MS/MS 1 0 0 0 1669 1784 1842 4182 3859 3859 7654 1 FPQCNKAQMTNILQQIKTAR ILEKLLTRFPQCNKAQ LQQIKTARTTMAGLTM R F P A R T 2 1 2 0 1 4 0 0 0 2 1 2 1 1 1 0 2 0 0 0 0 0 20 2 2389.2359 E9PN76;Q8ND24 E9PN76 411 430 RNF214 RING finger protein 214 yes no 3 0.013105 40.844 By matching By MS/MS 1 1 3870100 2224600 1645500 1670 831 1843 4183;4184 3860 3860 100 1 FPSPHPSPAK SSSTSAEKFPSPHPSP SPHPSPAKLKATAGH_ K F P A K L 1 0 0 0 0 0 0 0 1 0 0 1 0 1 4 2 0 0 0 0 0 0 10 0 1063.5451 B7ZB74;O14681 B7ZB74 151 160 EI24 Etoposide-induced protein 2.4 homolog yes no 2 0.009629 99.136 By MS/MS 1 0 0 0 1671 520 1844 4185 3861 3861 963 1 FQAEPYGLEDDTR GGRSLPERFQAEPYGL YGLEDDTRSLAADDEG R F Q T R S 1 1 0 2 0 1 2 1 0 0 1 0 0 1 1 0 1 0 1 0 0 0 13 0 1539.6842 C9JJX6;E9PDC3;O00192 C9JJX6 191 203 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 2 0.029748 67.776 By MS/MS By matching 1 1 2559200 1390400 1168800 1672 596 1845 4186;4187 3862 3862 1 FQDVGPQAPVGSVYQK SFHKESGRFQDVGPQA PVGSVYQKTNAVSEIK R F Q Q K T 1 0 0 1 0 3 0 2 0 0 0 1 0 1 2 1 0 0 1 3 0 0 16 0 1718.8628 H0Y5J4;Q9UJU6;B4DDD6 H0Y5J4 78 93 DBNL Drebrin-like protein yes no 2;3 2.1521E-06 113.24 By MS/MS By MS/MS 2 2 59477000 33551000 25926000 1673 1027 1846 4188;4189;4190;4191 3863;3864;3865;3866 3865 1907;7437 3 FQELLASPAYR LLEEERTRFQELLASP LLASPAYRASPLVAIG R F Q Y R A 2 1 0 0 0 1 1 0 0 0 2 0 0 1 1 1 0 0 1 0 0 0 11 0 1293.6717 Q9NSI2 Q9NSI2 197 207 FAM207A Protein FAM207A yes yes 2 0.0021254 91.858 By MS/MS By matching 1 1 1912300 1087400 824860 1674 2728 1847 4192;4193 3867 3867 5575 1 FQEQECPPSPEPTR ELVRVIRKFQEQECPP PPSPEPTRKEKDKKGC K F Q T R K 0 1 0 0 1 2 3 0 0 0 0 0 0 1 4 1 1 0 0 0 0 0 14 0 1700.7464 P62070 P62070 178 191 RRAS2 Ras-related protein R-Ras2 yes yes 2 7.0492E-35 142.57 By matching By MS/MS 1 1 25933000 11063000 14870000 1675 1789 1848 4194;4195 3868 3868 3367 0 FQEQECPPSPEPTRK ELVRVIRKFQEQECPP PSPEPTRKEKDKKGCH K F Q R K E 0 1 0 0 1 2 3 0 0 0 0 1 0 1 4 1 1 0 0 0 0 0 15 1 1828.8414 P62070 P62070 178 192 RRAS2 Ras-related protein R-Ras2 yes yes 3 0.012042 48.177 By MS/MS By MS/MS 1 1 23849000 11542000 12308000 1676 1789 1849 4196;4197 3869;3870 3869 3367 2 FQETEFLSPPR QKRIDQSKFQETEFLS TEFLSPPRKVPRLSEK K F Q P R K 0 1 0 0 0 1 2 0 0 0 1 0 0 2 2 1 1 0 0 0 0 0 11 0 1349.6616 P42166 P42166 417 427 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 8.8406E-06 122.46 By MS/MS By MS/MS 1 1 3335700 1732700 1603000 1677 1695 1850 4198;4199 3871;3872 3872 3109 2 FQLGGSAR CPTLYESRFQLGGSAR FQLGGSARGSRVLDRA R F Q A R G 1 1 0 0 0 1 0 2 0 0 1 0 0 1 0 1 0 0 0 0 0 0 8 0 834.4348 Q9H3H3 Q9H3H3 230 237 C11orf68 UPF0696 protein C11orf68 yes yes 2 0.015895 77.533 By MS/MS By MS/MS 2 2 7283100 4218600 3064500 1678 2652 1851 4200;4201;4202;4203 3873;3874 3873 5407 2 FQMMSLQWEPAYGTLTKNLSEK DVETDEEKFQMMSLQW LTKNLSEKRSAKSSEM K F Q E K R 1 0 1 0 0 2 2 1 0 0 3 2 2 1 1 2 2 1 1 0 0 0 22 1 2601.2607 B7Z7Y1;E9PCH4;Q8TEU7;D6RE77 B7Z7Y1 1127 1148 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 3 0.026684 43.848 By MS/MS 1 0 0 0 1679 516 1852 4204 3875 3875 7302 1 FQPSSVLSPYER RLGYVVRRFQPSSVLS SVLSPYERQLNLDASV R F Q E R Q 0 1 0 0 0 1 1 0 0 0 1 0 0 1 2 3 0 0 1 1 0 0 12 0 1408.6987 J3QLM6;Q7Z6J9 J3QLM6 116 127 TSEN54 tRNA-splicing endonuclease subunit Sen54 yes no 2 0.0013278 97.86 By MS/MS By MS/MS 1 1 3726100 1949900 1776200 1680 1249 1853 4205;4206 3876;3877 3876 2262 2 FQSEEQQQTEDELQDK RINKKIEKFQSEEQQQ TEDELQDKIHPFAQTQ K F Q D K I 0 0 0 2 0 5 4 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 16 0 1980.8549 CON__P02666 CON__P02666 33 48 yes yes 2 0.00071413 84.169 By MS/MS 1 1593700 0 1593700 + 1681 632 1854 4207 3878 3878 1 FQSISTEFLALMKKVSK LLPVETQRFQSISTEF ALMKKVSKSPLVMDVL R F Q S K S 1 0 0 0 0 1 1 0 0 1 2 3 1 2 0 3 1 0 0 1 0 0 17 2 1956.0754 Q14204 Q14204 1568 1584 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.015321 59.155 By MS/MS 1 0 0 0 1682 1944 1855 4208 3879 3879 1 FQSLGVAFYR WDTAGQERFQSLGVAF SLGVAFYRGADCCVLV R F Q Y R G 1 1 0 0 0 1 0 1 0 0 1 0 0 2 0 1 0 0 1 1 0 0 10 0 1186.6135 C9J8S3;P51149;C9IZZ0;C9J592 C9J8S3 70 79 RAB7A Ras-related protein Rab-7a yes no 2 0.0017812 95.417 By MS/MS By MS/MS 1 1 4454200 2519500 1934700 1683 571 1856 4209;4210 3880;3881 3881 1049 2 FQSPQIQATISPPLQPK QQPKSRPKFQSPQIQA ISPPLQPKTKTYEEDP K F Q P K T 1 0 0 0 0 4 0 0 0 2 1 1 0 1 4 2 1 0 0 0 0 0 17 0 1879.0203 A0A087WYN9;Q7Z478 A0A087WYN9 190 206 DHX29 ATP-dependent RNA helicase DHX29 yes no 2;3 1.0565E-05 100.59 By MS/MS By MS/MS 2 2 36172000 16634000 19538000 1684 98 1857 4211;4212;4213;4214 3882;3883;3884;3885;3886;3887;3888 3885 183;6241 7 FQTGNKSPEVLR RERDVDLRFQTGNKSP NKSPEVLRAFDVPDAE R F Q L R A 0 1 1 0 0 1 1 1 0 0 1 1 0 1 1 1 1 0 0 1 0 0 12 1 1374.7256 Q96S66 Q96S66 432 443 CLCC1 Chloride channel CLIC-like protein 1 yes yes 2;3 0.0015441 98.253 By MS/MS By MS/MS 2 2 153180000 80124000 73053000 1685 2539 1858 4215;4216;4217;4218 3889;3890;3891;3892 3892 5119 4 FRILEQKNYR F R Y R 0 2 1 0 0 1 1 0 0 1 1 1 0 1 0 0 0 0 1 0 0 0 10 2 1365.7517 REV__A2A2P1 yes no 2 0.031386 56.434 By MS/MS 1 0 0 0 + 1686 2957 1859 4219 3893 3893 7968 1 FRQSLPLSR LGFSRMNRFRQSLPLS RQSLPLSRSASQTKLR R F R S R S 0 2 0 0 0 1 0 0 0 0 2 0 0 1 1 2 0 0 0 0 0 0 9 1 1102.6247 A0A087WU33;A0A087X165 A0A087WU33 222 230 SRCIN1 yes no 2 0.017057 70.728 By MS/MS By matching 1 1 6517500 4209900 2307700 1687 40 1860 4220;4221 3894 3894 70 1 FRTPSFLK SPSKKKKKFRTPSFLK FRTPSFLKKSKKKSDS K F R L K K 0 1 0 0 0 0 0 0 0 0 1 1 0 2 1 1 1 0 0 0 0 0 8 1 994.56 P35611;P35612;Q9UEY8 P35611 722 729 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin no no 3 0.023167 55.721 By MS/MS 1 0 0 0 1688 1673;2808;1674 1861 4222 3895 3895 3082 1 FRTPSFLKK SPSKKKKKFRTPSFLK RTPSFLKKSKKKSDS_ K F R K K S 0 1 0 0 0 0 0 0 0 0 1 2 0 2 1 1 1 0 0 0 0 0 9 2 1122.655 P35611;P35612;Q9UEY8 P35611 722 730 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin no no 3 0.024983 58.132 By matching By MS/MS 1 1 14849000 6618600 8230800 1689 1673;2808;1674 1862 4223;4224 3896 3896 3082 1 FSAHYDAVEAELK MKSNIDKKFSAHYDAV DAVEAELKSSTVGLVT K F S L K S 3 0 0 1 0 0 2 0 1 0 1 1 0 1 0 1 0 0 1 1 0 0 13 0 1478.7042 B0S8I6;Q9Y247;Q14320 B0S8I6 9 21 FAM50A;FAM50B Protein FAM50B;Protein FAM50A yes no 2 0.0012985 101.65 By MS/MS 1 7248600 7248600 0 1690 450 1863 4225 3897 3897 880 1 FSASGELGNGNIK SCAKDGVKFSASGELG ELGNGNIKLSQTSNVD K F S I K L 1 0 2 0 0 0 1 3 0 1 1 1 0 1 0 2 0 0 0 0 0 0 13 0 1292.6361 P12004 P12004 169 181 PCNA Proliferating cell nuclear antigen yes yes 2 0.0023428 97.456 By MS/MS By MS/MS 1 2 4157400 2272800 1884600 1691 1568 1864;1865 4226;4227;4228 3898;3899;3900 3898 3 FSDQAGPAIPTSNSYSK SANPKQRRFSDQAGPA PTSNSYSKKTQSNNAE R F S S K K 2 0 1 1 0 1 0 1 0 1 0 1 0 1 2 4 1 0 1 0 0 0 17 0 1768.8268 E7ETY4;E9PC69 E7ETY4 375 391 MARK2 yes no 2 0.0052544 73.928 By matching By MS/MS 1 1 19120000 11593000 7526900 1692 738 1866 4229;4230 3901 3901 1326;1327;1328;6426 1 FSDQAGPAIPTSNSYSKK SANPKQRRFSDQAGPA TSNSYSKKTQSNNAEN R F S K K T 2 0 1 1 0 1 0 1 0 1 0 2 0 1 2 4 1 0 1 0 0 0 18 1 1896.9218 E7ETY4;E9PC69 E7ETY4 375 392 MARK2 yes no 3 0.01395 44.641 By MS/MS 1 3448800 3448800 0 1693 738 1867 4231 3902 3902 1326;1327;1328;6426 1 FSEGVLQSPSQDQEK PTSLVQRRFSEGVLQS SPSQDQEKLGGSLAAL R F S E K L 0 0 0 1 0 3 2 1 0 0 1 1 0 1 1 3 0 0 0 1 0 0 15 0 1677.7846 Q9C0C2 Q9C0C2 428 442 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.013899 57.794 By MS/MS By matching 1 1 6152300 3516700 2635600 1694 2615 1868 4232;4233 3903 3903 5297;5298 1 FSFKKPFK ETPKKKKKFSFKKPFK FSFKKPFKLSGLSFKR K F S F K L 0 0 0 0 0 0 0 0 0 0 0 3 0 3 1 1 0 0 0 0 0 0 8 2 1027.5855 P49006 P49006 92 99 MARCKSL1 MARCKS-related protein yes yes 3 0.025598 59.067 By MS/MS By matching 1 1 30787000 11059000 19728000 1695 1721 1869 4234;4235 3904 3904 1 FSFKKSFK TPKKKKKRFSFKKSFK FSFKKSFKLSGFSFKK R F S F K L 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 2 0 0 0 0 0 0 8 2 1017.5648 P29966 P29966 158 165 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.012408 75.652 By MS/MS By MS/MS 1 1 5147000 2244200 2902800 1696 1648 1870 4236;4237 3905;3906 3905 3045 2 FSFRSQEDLNEPIKR GVTEAIEKFSFRSQED DLNEPIKRDGKKECDI K F S K R D 0 2 1 1 0 1 2 0 0 1 1 1 0 2 1 2 0 0 0 0 0 0 15 2 1864.9432 Q7Z460;H0Y5T1;F8WA11 Q7Z460 1192 1206 CLASP1 CLIP-associating protein 1 yes no 3 1.6476E-09 123.63 By MS/MS By MS/MS 1 1 15364000 8341300 7023100 1697 2217 1871 4238;4239 3907;3908 3907 4421 2 FSFYGNLSPR LVEEGRRKFSFYGNLS FYGNLSPRRSLYRTLS K F S P R R 0 1 1 0 0 0 0 1 0 0 1 0 0 2 1 2 0 0 1 0 0 0 10 0 1186.5771 Q9P2F8 Q9P2F8 1471 1480 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 2 0.0044694 79.633 By MS/MS By MS/MS 1 1 2673200 1241600 1431600 1698 2790 1872 4240;4241 3909;3910 3910 5727 2 FSGDLDDQTCR EKIGCLLKFSGDLDDQ DLDDQTCREDLHILFS K F S C R E 0 1 0 3 1 1 0 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 11 0 1312.5354 P05455 P05455 236 246 SSB Lupus La protein yes yes 2 0.0032326 93.667 By MS/MS 1 2056100 0 2056100 1699 1526 1873 4242 3911 3911 1 FSGFSAKPNNSGEAPSSPTPK VTSTNPRKFSGFSAKP APSSPTPKRSLSSSKC K F S P K R 2 0 2 0 0 0 1 2 0 0 0 2 0 2 4 5 1 0 0 0 0 0 21 1 2106.0018 P49916;K7ENR9;K7ERZ5 P49916 226 246 LIG3 DNA ligase 3 yes no 2;3 2.9207E-05 76.329 By MS/MS By MS/MS 2 2 32496000 18952000 13544000 1700 1735 1874 4243;4244;4245;4246 3912;3913;3914 3914 3283;3284 3 FSGGFGAR RGRSKSSRFSGGFGAR FSGGFGARDYRQSSGA R F S A R D 1 1 0 0 0 0 0 3 0 0 0 0 0 2 0 1 0 0 0 0 0 0 8 0 797.38204 A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O00571;A0A087WVZ1;O15523;A0A0J9YVQ7 A0A0D9SFB3 593 600 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.021162 71.342 By MS/MS By MS/MS 1 1 44590000 20639000 23951000 1701 311 1875 4247;4248 3915;3916 3916 563 2 FSIGDSPDSSTPK TNQFKIPKFSIGDSPD SPDSSTPKLSRAQRPQ K F S P K L 0 0 0 2 0 0 0 1 0 1 0 1 0 1 2 4 1 0 0 0 0 0 13 0 1336.6147 Q9NYZ3 Q9NYZ3 456 468 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.012986 78.191 By MS/MS By matching 1 1 4799300 2955400 1843800 1702 2762 1876 4249;4250 3917 3917 5670 0 FSKEEPVSSGPEEAVGK SGSKKKRKFSKEEPVS GPEEAVGKSSSKKKKK K F S G K S 1 0 0 0 0 0 4 2 0 0 0 2 0 1 2 3 0 0 0 2 0 0 17 1 1775.8578 O00567 O00567 562 578 NOP56 Nucleolar protein 56 yes yes 2;3 1.8975E-16 136.36 By MS/MS By MS/MS 3 2 112760000 73001000 39754000 1703 1338 1877;1878 4251;4252;4253;4254;4255 3918;3919;3920;3921;3922;3923 3920 2413;2414;2415 6 FSLCSDNLEGISEGPSNR GKPDKTLRFSLCSDNL ISEGPSNRSNSVSSLD R F S N R S 0 1 2 1 1 0 2 2 0 1 2 0 0 1 1 4 0 0 0 0 0 0 18 0 1980.8847 Q14C86;H0Y7I9;C9IZ08;B4DGD8;A0A0A0MQV8 Q14C86 565 582 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2 0.0060347 61.212 By matching By MS/MS 1 1 11225000 5811000 5414500 1704 1964 1879 4256;4257 3924 3924 3820;3821 1 FSLSPSLGPQASR SPCPPQRRFSLSPSLG SLGPQASRFLPSARSS R F S S R F 1 1 0 0 0 1 0 1 0 0 2 0 0 1 2 4 0 0 0 0 0 0 13 0 1345.699 Q9NYF3 Q9NYF3 231 243 FAM53C Protein FAM53C yes yes 2 0.0053631 71.98 By MS/MS By matching 1 1 18257000 10028000 8229500 1705 2757 1880 4258;4259 3925 3925 5636;5637;5638 1 FSPDSQYIDNR KNNYYSSRFSPDSQYI DSQYIDNRSVNSAGLH R F S N R S 0 1 1 2 0 1 0 0 0 1 0 0 0 1 1 2 0 0 1 0 0 0 11 0 1340.5997 Q5VWV2;Q8TEW0;Q5VWU8;F5GZI3 Q5VWV2 338 348 PARD3 Partitioning defective 3 homolog yes no 2 4.5613E-06 123.75 By MS/MS By MS/MS 1 1 58077000 32880000 25197000 1706 2121 1881 4260;4261 3926;3927 3926 7751 2 FSPVTPK SSPAPAPKFSPVTPKF KFSPVTPKFTPVASKF K F S P K F 0 0 0 0 0 0 0 0 0 0 0 1 0 1 2 1 1 0 0 1 0 0 7 0 774.42759 H0Y2Y8;Q15942;H7C3D3 H0Y2Y8 234 240 ZYX Zyxin yes no 2 0.013705 96.034 By matching By MS/MS 1 1 17720000 9476400 8243600 1707 1007 1882 4262;4263 3928 3928 1853 1 FSSLSYK TTSETNKRFSSLSYKS RFSSLSYKSREEDPTL R F S Y K S 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 3 0 0 1 0 0 0 7 0 830.41742 Q9NWQ8 Q9NWQ8 294 300 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 0.023114 83.948 By MS/MS By matching 1 1 2362700 1121300 1241400 1708 2746 1883 4264;4265 3929 3929 1 FSSVSSPQPR ASVRSLGRFSSVSSPQ SVSSPQPRSRHPSSSS R F S P R S 0 1 0 0 0 1 0 0 0 0 0 0 0 1 2 4 0 0 0 1 0 0 10 0 1090.5407 Q9P206 Q9P206 337 346 KIAA1522 Uncharacterized protein KIAA1522 yes yes 2 0.0015279 103.08 By MS/MS By MS/MS 1 1 17034000 10149000 6884600 1709 2779 1884 4266;4267 3930;3931 3930 5703;5704 2 FSTLTDDPSPR KDDLGPDRFSTLTDDP LTDDPSPRLSAQAQVA R F S P R L 0 1 0 2 0 0 0 0 0 0 1 0 0 1 2 2 2 0 0 0 0 0 11 0 1234.583 Q14C86 Q14C86 1011 1021 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.00051813 107.99 By MS/MS By MS/MS 1 1 5040300 2928700 2111500 1710 1964 1885 4268;4269 3932;3933 3932 3822 2 FSVSPSSPSSQQTPPPVTPR NVIGSERRFSVSPSSP TPPPVTPRAKLSFSMQ R F S P R A 0 1 0 0 0 2 0 0 0 0 0 0 0 1 6 6 2 0 0 2 0 0 20 0 2082.0382 A0A096LNH6;Q14185 A0A096LNH6 1776 1795 DOCK1 Dedicator of cytokinesis protein 1 yes no 3 0.0081884 49.577 By MS/MS 1 1694600 0 1694600 1711 153 1886 4270 3934 3934 274;275 1 FSVSPVVR AHNMRVMKFSVSPVVR FSVSPVVRVAVEAKNP K F S V R V 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 3 0 0 8 0 889.50215 P13639 P13639 499 506 EEF2 Elongation factor 2 yes yes 2 0.015 79.148 By MS/MS By MS/MS 1 1 2695700 1371100 1324600 1712 1575 1887 4271;4272 3935;3936 3935 2895 2 FSYANVAWQDIDFAVDENGLWVIYSTEASTGNMVISK PNAAYNNRFSYANVAW TGNMVISKLNDTTLQV R F S S K L 4 0 3 3 0 1 2 2 0 3 1 1 1 2 0 4 2 2 2 4 0 0 37 0 4139.9463 Q6UX06 Q6UX06 373 409 OLFM4 Olfactomedin-4 yes yes 3;4 0.0039822 61.642 By MS/MS By MS/MS 2 1 15688000 10093000 5594800 1713 2170 1888 4273;4274;4275 3937;3938 3937 293 0 FTDKDQQPSGSEGEDDDAEAALK DDMYGPEKFTDKDQQP DDAEAALKKEVGDIKA K F T L K K 3 0 0 5 0 2 3 2 0 0 1 2 0 1 1 2 1 0 0 0 0 0 23 1 2452.0514 H3BNW0;Q9NXG2 H3BNW0 78 100 THUMPD1 THUMP domain-containing protein 1 yes no 3 0.0051054 52.898 By MS/MS By MS/MS 1 1 18074000 10264000 7810100 1714 1123 1889 4276;4277 3939;3940 3939 2051;2052 2 FTDKDQQPSGSEGEDDDAEAALKK DDMYGPEKFTDKDQQP DAEAALKKEVGDIKAS K F T K K E 3 0 0 5 0 2 3 2 0 0 1 3 0 1 1 2 1 0 0 0 0 0 24 2 2580.1463 H3BNW0;Q9NXG2 H3BNW0 78 101 THUMPD1 THUMP domain-containing protein 1 yes no 3 0.025598 45.243 By matching By MS/MS 1 1 132960000 64871000 68088000 1715 1123 1890 4278;4279 3941 3941 2051;2052 1 FTEYSMTSSVMR WSEETKSRFTEYSMTS SMTSSVMRRNEQLTLH R F T M R R 0 1 0 0 0 0 1 0 0 0 0 0 2 1 0 3 2 0 1 1 0 0 12 0 1437.6268 Q96GA3;A0A075B6Q4 Q96GA3 240 251 LTV1 Protein LTV1 homolog yes no 2 4.7755E-28 180.67 By MS/MS By MS/MS 2 3 39940000 22301000 17639000 1716 2488 1891;1892 4280;4281;4282;4283;4284 3942;3943;3944;3945;3946;3947 3946 332;333 7840 6 FTISHMYADIK WAPEGKDRFTISHMYA SHMYADIKCQKISPEG R F T I K C 1 0 0 1 0 0 0 0 1 2 0 1 1 1 0 1 1 0 1 0 0 0 11 0 1324.6486 E9PL58;P32780 E9PL58 41 51 GTF2H1 General transcription factor IIH subunit 1 yes no 2 0.021294 67.385 By matching By MS/MS 1 1 11276000 5236900 6038900 1717 820 1893 4285;4286 3948 3948 1466 1 FTLSVLKCLQMLSVEK FSLSIVRRFTLSVLKC LQMLSVEKIIHCDLKP R F T E K I 0 0 0 0 1 1 1 0 0 0 4 2 1 1 0 2 1 0 0 2 0 0 16 1 1895.026 A0A0A0MTH5;Q9NR20 A0A0A0MTH5 325 340 DYRK4 Dual specificity tyrosine-phosphorylation-regulated kinase 4 yes no 2 0.0044177 72.523 By MS/MS By MS/MS 1 1 57829000 36736000 21094000 1718 246 1894 4287;4288 3949;3950 3949 450;6289 2 FTNTVTWNSR F T S R 0 1 2 0 0 0 0 0 0 0 0 0 0 1 0 1 3 1 0 1 0 0 10 0 1224.5887 REV__Q13651 yes yes 2 0.010652 53.569 By MS/MS By matching 1 1 44373000 24724000 19649000 + 1719 2993 1895 4289;4290 3951 3951 6184;7146 1 FTSGAFLSPSVSVQECRTPR VGGLLQSKFTSGAFLS VQECRTPRAASLMNIP K F T P R A 1 2 0 0 1 1 1 1 0 0 1 0 0 2 2 4 2 0 0 2 0 0 20 1 2225.0899 P52948;H7C3P6 P52948 1053 1072 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 3 0.0026412 61.477 By MS/MS By MS/MS 2 2 32067000 16458000 15609000 1720 1759 1896;1897 4291;4292;4293;4294 3952;3953;3954 3953 6734 3 FTSQQGPIKPVSPNSSPFGTDYR TVTQVLSRFTSQQGPI SPFGTDYRNLANTANP R F T Y R N 0 1 1 1 0 2 0 2 0 1 0 1 0 2 4 4 2 0 1 1 0 0 23 1 2509.2238 Q9P2B4 Q9P2B4 512 534 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 3 0.010336 46.982 By matching By MS/MS 1 1 7302100 4092200 3209900 1721 2786 1898 4295;4296 3955 3955 5720 1 FTSSQTQSPTPPKPPSPSFELGLSSFPPLPGAAGNLK YRKKREEKFTSSQTQS PGAAGNLKTEDLFENR K F T L K T 2 0 1 0 0 2 1 3 0 0 4 2 0 3 9 7 3 0 0 0 0 0 37 1 3765.9254 H0Y4V9;Q92615 H0Y4V9 75 111 LARP4B La-related protein 4B yes no 3 0.00028516 50.224 By MS/MS 1 40589000 40589000 0 1722 1020 1899 4297 3956 3956 1888 1 FTVLLMPNGPMR GEFVAQFKFTVLLMPN LMPNGPMRITSGPFEP K F T M R I 0 1 1 0 0 0 0 1 0 0 2 0 2 1 2 0 1 0 0 1 0 0 12 0 1374.7152 Q9UQ80 Q9UQ80 321 332 PA2G4 Proliferation-associated protein 2G4 yes yes 2 0.020032 49.418 By MS/MS 1 2321000 2321000 0 1723 2878 1900 4298 3957 3957 1 FTYLGSQDR PVDDLTRKFTYLGSQD TYLGSQDRARPPSGSS K F T D R A 0 1 0 1 0 1 0 1 0 0 1 0 0 1 0 1 1 0 1 0 0 0 9 0 1085.5142 C9J6P4;Q7Z2W4 C9J6P4 297 305 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0026592 101.33 By MS/MS By MS/MS 1 1 2827100 1281400 1545600 1724 565 1901 4299;4300 3958;3959 3959 7314 2 FVAFSGEGQSLR EEDEAGGRFVAFSGEG SGEGQSLRKKGRKP__ R F V L R K 1 1 0 0 0 1 1 2 0 0 1 0 0 2 0 2 0 0 0 1 0 0 12 0 1296.6463 Q92890 Q92890 290 301 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 1.3112E-28 181.98 By MS/MS By MS/MS 1 1 20888000 11932000 8956800 1725 2444 1902 4301;4302 3960;3961 3961 4920 2 FVAFSGEGQSLRK EEDEAGGRFVAFSGEG GEGQSLRKKGRKP___ R F V R K K 1 1 0 0 0 1 1 2 0 0 1 1 0 2 0 2 0 0 0 1 0 0 13 1 1424.7412 Q92890 Q92890 290 302 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 3 0.023534 50.207 By MS/MS 1 0 0 0 1726 2444 1903 4303 3962 3962 4920 1 FVLSQAKDEL RDLDSLHRFVLSQAKD LSQAKDEL________ R F V E L - 1 0 0 1 0 1 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 0 10 1 1148.6077 Q8NBS9 Q8NBS9 423 432 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 2 0.0063699 70.256 By MS/MS 1 0 0 0 1727 2334 1904 4304 3963 3963 1 FVMQEEFSR IRTAKGEKFVMQEEFS VMQEEFSRDGKALERF K F V S R D 0 1 0 0 0 1 2 0 0 0 0 0 1 2 0 1 0 0 0 1 0 0 9 0 1171.5332 P30101 P30101 336 344 PDIA3 Protein disulfide-isomerase A3 yes yes 2 0.010352 93.374 By MS/MS 1 0 0 0 1728 1653 1905 4305 3964 3964 1 FVNVVPTFGK RRMQYNRRFVNVVPTF NVVPTFGKKKGPNANS R F V G K K 0 0 1 0 0 0 0 1 0 0 0 1 0 2 1 0 1 0 0 3 0 0 10 0 1106.6124 E9PR30;P62861 E9PR30 81 90 FAU 40S ribosomal protein S30 yes no 2 0.011013 75.509 By matching By MS/MS 1 1 2930700 1147400 1783300 1729 840 1906 4306;4307 3965 3965 1 FVSEGDGGR CPSRGRKRFVSEGDGG VSEGDGGRLKPESY__ R F V G R L 0 1 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 1 0 0 9 0 922.41446 Q53EL6 Q53EL6 455 463 PDCD4 Programmed cell death protein 4 yes yes 2 0.0016661 120.63 By MS/MS By MS/MS 1 1 79428000 43292000 36136000 1730 2053 1907 4308;4309 3966;3967;3968;3969;3970;3971 3971 4034 6 FVSEGDGGRLKPESY CPSRGRKRFVSEGDGG GRLKPESY________ R F V S Y - 0 1 0 1 0 0 2 3 0 0 1 1 0 1 1 2 0 0 1 1 0 0 15 2 1639.7842 Q53EL6 Q53EL6 455 469 PDCD4 Programmed cell death protein 4 yes yes 2;3 0.001403 92.773 By MS/MS By MS/MS 2 2 470970000 258900000 212070000 1731 2053 1908 4310;4311;4312;4313 3972;3973;3974 3974 4034 3 FVSEIVDTVYEDGDSIQVGLVQYNSDPTDEFFLK DSFQEVLRFVSEIVDT PTDEFFLKDFSTKRQI R F V L K D 0 0 1 5 0 2 3 2 0 2 2 1 0 3 1 3 2 0 2 5 0 0 34 0 3867.8255 E7ENL6;P12111 E7ENL6 1054 1087 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.028022 40.129 By MS/MS By matching 1 1 71003000 69814000 1189000 1732 710 1909 4314;4315 3975 3975 1 FVTKINMNGINNSSGMSLTLSPR PEAPPSVRFVTKINMN MSLTLSPRLEYNCAIL R F V P R L 0 1 4 0 0 0 0 2 0 2 2 1 2 1 1 4 2 0 0 1 0 0 23 1 2480.2516 H0YBX6 H0YBX6 87 109 UBE2V2 yes yes 3 0.0037192 48.607 By MS/MS By matching 1 1 23826000 10283000 13543000 1733 1056 1910 4316;4317 3976 3976 128 1961;1962;6525 1 FVVIQNEDLGPASPLDSTFYR RMARDPQRFVVIQNED PLDSTFYRSLLEDDDM R F V Y R S 1 1 1 2 0 1 1 1 0 1 2 0 0 2 2 2 1 0 1 2 0 0 21 0 2367.1747 B4DTR1;J3QLU9;P04626 B4DTR1 710 730 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 yes no 2 1.1718E-18 124.31 By MS/MS By MS/MS 1 1 20647000 14466000 6181400 1734 490 1911 4318;4319 3977;3978 3977 923 2 FYAGGSER EEEEEGQRFYAGGSER FYAGGSERSGQQIVGP R F Y E R S 1 1 0 0 0 0 1 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 8 0 885.39808 F2Z2K0;Q9UNZ2 F2Z2K0 94 101 NSFL1C NSFL1 cofactor p47 yes no 2 0.014955 72.789 By MS/MS By MS/MS 1 1 2554200 0 2554200 1735 848 1912 4320;4321 3979;3980 3980 1531;7396 2 FYCDYCDTYLTHDSPSVR LFLSPLFRFYCDYCDT THDSPSVRKTHCSGRK R F Y V R K 0 1 0 3 2 0 0 0 1 0 1 0 0 1 1 2 2 0 3 1 0 0 18 0 2297.9358 A0A0A0MRR7;P09234 A0A0A0MRR7 25 42 SNRPC U1 small nuclear ribonucleoprotein C yes no 2;3 1.4946E-19 131.31 By MS/MS By MS/MS 2 2 21912000 11423000 10489000 1736 198 1913 4322;4323;4324;4325 3981;3982;3983;3984;3985 3984 361 5 FYDANYDGKEYDPVEAR DFIQWFKKFYDANYDG EYDPVEARQGQDAIPP K F Y A R Q 2 1 1 3 0 0 2 1 0 0 0 1 0 1 1 0 0 0 3 1 0 0 17 1 2050.8909 K7EL66;K7ERD8;Q15555 K7EL66 63 79 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes no 3 0.0053608 55.546 By MS/MS By matching 1 1 5562300 2453900 3108400 1737 1276 1914 4326;4327 3986 3986 7484 1 FYDPSPPR EKIMDQYKFYDPSPPR FYDPSPPRRRGNWITL K F Y P R R 0 1 0 1 0 0 0 0 0 0 0 0 0 1 3 1 0 0 1 0 0 0 8 0 977.46068 Q3V6T2;H0Y7K3;H0Y470;H7C2C6;H0Y7U8 Q3V6T2 1383 1390 CCDC88A Girdin yes no 2 0.015981 77.379 By MS/MS By MS/MS 1 1 8093700 4008600 4085100 1738 2040 1915 4328;4329 3987;3988 3988 3994 2 FYEEVHDLER RCAHIEAKFYEEVHDL EEVHDLERKYAALYQP K F Y E R K 0 1 0 1 0 0 3 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 10 0 1335.6095 E9PNJ7;A8MXH2;E9PKT8;C9J6D1;C9JZI7;Q99733;E9PS34;E9PNW0;E9PJJ2;F8VRJ2;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;F8VV59;B7Z9C2;F8W0J6;F5H4R6;H0YIV4;P55209;F8VVB5;H0YH88;F8W543 E9PNJ7 84 93 NAP1L4;NAP1L1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 no no 2;3 0.002435 76.679 By MS/MS By MS/MS 2 1 4672600 2694500 1978100 1739 439;519 1916 4330;4331;4332 3989;3990;3991 3989 7272 3 FYEQFSK EDKENYKKFYEQFSKN KFYEQFSKNIKLGIHE K F Y S K N 0 0 0 0 0 1 1 0 0 0 0 1 0 2 0 1 0 0 1 0 0 0 7 0 947.43888 P07900 P07900 437 443 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.0060427 132.57 By MS/MS By MS/MS 1 1 7536100 3539800 3996300 1740 1540 1917 4333;4334 3992;3993 3992 2 FYETKEESYSPSKDR KTEPIETKFYETKEES SYSPSKDRNIITEGNG K F Y D R N 0 1 0 1 0 0 3 0 0 0 0 2 0 1 1 3 1 0 2 0 0 0 15 2 1864.8479 Q96T23;H0YER1;H0YCN2 Q96T23 464 478 RSF1 Remodeling and spacing factor 1 yes no 3 0.00069374 82.755 By MS/MS By MS/MS 1 1 18188000 9983500 8204100 1741 2544 1918 4335;4336 3994;3995 3994 5137 2 FYGPQVNNISHTK NPEITTNRFYGPQVNN VNNISHTKEKKKGKAK R F Y T K E 0 0 2 0 0 1 0 1 1 1 0 1 0 1 1 1 1 0 1 1 0 0 13 0 1503.747 O00401 O00401 174 186 WASL Neural Wiskott-Aldrich syndrome protein yes yes 3 0.011435 61.532 By MS/MS 1 0 0 0 1742 1331 1919 4337 3996 3996 7499 1 FYQGLPWGVSSLPR AFNNYHSRFYQGLPWG WGVSSLPRYLGLPGLH R F Y P R Y 0 1 0 0 0 1 0 2 0 0 2 0 0 1 2 2 0 1 1 1 0 0 14 0 1605.8304 Q5JTC6 Q5JTC6 858 871 AMER1 APC membrane recruitment protein 1 yes yes 2 0.0025269 78.814 By MS/MS By matching 1 1 7484600 5503500 1981100 1743 2075 1920 4338;4339 3997 3997 4088;4089 1 GAAEEAELEDSDDEEKPVK FISAGLKKGAAEEAEL DDEEKPVKQDDFPKDF K G A V K Q 3 0 0 3 0 0 6 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 19 1 2059.907 Q9UBB9;F6XM96 Q9UBB9 88 106 TFIP11 Tuftelin-interacting protein 11 yes no 2 5.2946E-06 88.133 By matching By MS/MS 1 1 10152000 5347700 4804400 1744 2799 1921 4340;4341 3998 3998 5740 1 GAAEEAELEDSDDEEKPVKQDDFPK FISAGLKKGAAEEAEL VKQDDFPKDFGPRKLK K G A P K D 3 0 0 5 0 1 6 1 0 0 1 3 0 1 2 1 0 0 0 1 0 0 25 2 2790.2356 Q9UBB9;F6XM96 Q9UBB9 88 112 TFIP11 Tuftelin-interacting protein 11 yes no 3 1.0148E-05 75.912 By MS/MS By MS/MS 1 1 77742000 41983000 35758000 1745 2799 1922 4342;4343 3999;4000 4000 5740 2 GAAKEAAGKSSGPTSLFAVTVAPPGAR QQQPQQQRGAAKEAAG TVAPPGARQGQQQAGG R G A A R Q 7 1 0 0 0 0 1 4 0 0 1 2 0 1 3 3 2 0 0 2 0 0 27 2 2497.3289 Q00839 Q00839 178 204 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3;4 0.0003592 73.574 By MS/MS By MS/MS 2 2 27345000 19526000 7819000 1746 1827 1923 4344;4345;4346;4347 4001;4002 4001 2 GAASPTQAALPR CGAALGARGAASPTQA PTQAALPRRQQLLLEF R G A P R R 4 1 0 0 0 1 0 1 0 0 1 0 0 0 2 1 1 0 0 0 0 0 12 0 1138.6095 Q96JH8 Q96JH8 390 401 RADIL Ras-associating and dilute domain-containing protein yes yes 2 0.021314 59.796 By matching By MS/MS 1 1 13329000 7165100 6163800 1747 2508 1924 4348;4349 4003 4003 5046 1 GAASTLVPGVSETSASPGSPSVR VRRRRQQRGAASTLVP SPGSPSVRSMSGPESS R G A V R S 3 1 0 0 0 0 1 3 0 0 1 0 0 0 3 6 2 0 0 3 0 0 23 0 2113.0651 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2513 2535 SRCAP Helicase SRCAP yes no 2;3 5.5205E-19 112.57 By MS/MS By MS/MS 3 4 92025000 50211000 41814000 1748 208 1925;1926 4350;4351;4352;4353;4354;4355;4356 4004;4005;4006;4007;4008 4008 376;377;378;6279 5 GADDAADADTAIINAEGGQNNSEEKKEYFI TYFTHEAKGADDAADA EEKKEYFI________ K G A F I - 6 0 3 4 0 1 4 3 0 3 0 2 0 1 0 1 1 0 1 0 0 0 30 2 3155.4167 A0A087X105;A0A087WZW4;A0A087X1W8;A0A0A0MTJ8;A0A087WZR6;X5DQS5;Q9BY67 A0A087X105 344 373 CADM1 Cell adhesion molecule 1 yes no 3 2.1434E-31 110.25 By MS/MS By MS/MS 1 1 129050000 57549000 71504000 1749 116 1927 4357;4358 4009;4010 4010 6248;7173 2 GADFLVTEVENGGSLGSK ISLQVKQKGADFLVTE NGGSLGSKKGVNLPGA K G A S K K 1 0 1 1 0 0 2 4 0 0 2 1 0 1 0 2 1 0 0 2 0 0 18 0 1778.8687 B4DNK4;H3BTN5;P14618;H3BQ34 B4DNK4 115 132 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 1.7656E-05 86.772 By MS/MS By MS/MS 2 2 9341200 4479300 4861800 1750 485 1928;1929 4359;4360;4361;4362 4011;4012;4013 4011 3 3 GADNDGSGSESGYTTPK ITNGYMGKGADNDGSG ESGYTTPKKRKARRNS K G A P K K 1 0 1 2 0 0 1 4 0 0 0 1 0 0 1 3 2 0 1 0 0 0 17 0 1641.6754 Q7Z417 Q7Z417 206 222 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 3.3845E-11 127.32 By MS/MS By MS/MS 1 1 13304000 6987300 6317100 1751 2214 1930 4363;4364 4014;4015 4015 4414 2 GAEAFGDSEEDGEDVFEVEK EDNDAAARGAEAFGDS EDVFEVEKILDMKTEG R G A E K I 2 0 0 3 0 0 6 3 0 0 0 1 0 2 0 1 0 0 0 2 0 0 20 0 2157.8862 Q99549 Q99549 44 63 MPHOSPH8 M-phase phosphoprotein 8 yes yes 3 0.024956 41.689 By MS/MS By matching 1 1 10019000 4672300 5347200 1752 2551 1931 4365;4366 4016 4016 1 GAEASAASEEEAGPQATEPSTPSGPESGPTPASAEQNE ESQEPQAKGAEASAAS PASAEQNE________ K G A N E - 8 0 1 0 0 2 8 4 0 0 0 0 0 0 6 6 3 0 0 0 0 0 38 0 3624.5459 P49006 P49006 158 195 MARCKSL1 MARCKS-related protein yes yes 4 0.00023497 49.464 By MS/MS By matching 1 1 39145000 22001000 17144000 1753 1721 1932 4367;4368 4017 4017 3220 1 GAEETSWSGEER CSQAAGTKGAEETSWS TSWSGEERAAKVPSTP K G A E R A 1 1 0 0 0 0 4 2 0 0 0 0 0 0 0 2 1 1 0 0 0 0 12 0 1336.5531 Q9H7N4 Q9H7N4 958 969 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 1.9588E-14 162.72 By MS/MS By MS/MS 1 1 37973000 21445000 16528000 1754 2675 1933 4369;4370 4018;4019 4019 5457 2 GAGAGHPGAGGAQPPDSPAGVR ATNGSFCRGAGAGHPG PDSPAGVRTAFTDLPE R G A V R T 5 1 0 1 0 1 0 7 1 0 0 0 0 0 4 1 0 0 0 1 0 0 22 0 1882.9034 Q13884 Q13884 71 92 SNTB1 Beta-1-syntrophin yes yes 3 0.0084636 48.337 By matching By MS/MS 1 1 16887000 8732000 8154800 1755 1934 1934 4371;4372 4020 4020 3731 1 GAGDGSDEEVDGKADGAEAKPAE VPRRMARKGAGDGSDE GAEAKPAE________ K G A A E - 5 0 0 4 0 0 4 5 0 0 0 2 0 0 1 1 0 0 0 1 0 0 23 2 2173.9247 P35579 P35579 1938 1960 MYH9 Myosin-9 yes yes 2;3 1.6266E-14 108.69 By MS/MS By MS/MS 2 2 139930000 75113000 64815000 1756 1670 1935 4373;4374;4375;4376 4021;4022;4023;4024 4021 3075 4 GAGDTDEEGEEDAFEDAPR EAAGAPVRGAGDTDEE DAFEDAPRGSPGEEWA R G A P R G 3 1 0 4 0 0 5 3 0 0 0 0 0 1 1 0 1 0 0 0 0 0 19 0 2008.777 Q9NZ56 Q9NZ56 341 359 FMN2 Formin-2 yes yes 2 1.3715E-05 96.666 By MS/MS By matching 1 1 4826600 3119200 1707400 1757 2763 1936 4377;4378 4025;4026 4026 7075 2 GAILSEEELAAMSPTAAAVAK LLSATKRKGAILSEEE PTAAAVAKIVKPGMKL K G A A K I 7 0 0 0 0 0 3 1 0 1 2 1 1 0 1 2 1 0 0 1 0 0 21 0 2029.0402 P12270 P12270 367 387 TPR Nucleoprotein TPR yes yes 2;3 2.5031E-05 81.016 By MS/MS By MS/MS 4 3 47189000 23637000 23552000 1758 1570 1937;1938 4379;4380;4381;4382;4383;4384;4385 4027;4028;4029;4030;4031 4030 191 2885 5 GAKEEHGGLIRSPR RRSKPLTRGAKEEHGG GGLIRSPRHEKKKKVR R G A P R H 1 2 0 0 0 0 2 3 1 1 1 1 0 0 1 1 0 0 0 0 0 0 14 2 1505.8063 P26368 P26368 68 81 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 3 0.023588 52.101 By MS/MS By MS/MS 1 1 184310000 58265000 126040000 1759 1635 1939 4386;4387 4032;4033 4033 3023 2 GALAERQHTSMDLPK GYAILEKKGALAERQH HTSMDLPKLASDDRPS K G A P K L 2 1 0 1 0 1 1 1 1 0 2 1 1 0 1 1 1 0 0 0 0 0 15 1 1652.8304 A0A0A0MR66;P98175 A0A0A0MR66 766 780 RBM10 RNA-binding protein 10 yes no 2 0.025063 58.752 By MS/MS 1 0 0 0 1760 172 1940 4388 4034 4034 1 GALHTVSHEDIR LRLDRLHKGALHTVSH TVSHEDIRDIRNSTGS K G A I R D 1 1 0 1 0 0 1 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1333.6739 Q13136;H0YDW2;H0YD72 Q13136 757 768 PPFIA1 Liprin-alpha-1 yes no 2;3 0.0023009 89.44 By MS/MS By MS/MS 2 2 61447000 28593000 32854000 1761 1899 1941 4389;4390;4391;4392 4035;4036;4037 4037 3624 3 GALPDDTEALQSLIDTHK AEQTLRFRGALPDDTE QSLIDTHKEFMKKVEE R G A H K E 2 0 0 3 0 1 1 1 1 1 3 1 0 0 1 1 2 0 0 0 0 0 18 0 1922.9585 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 3842 3859 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 0.030409 40.475 By matching By MS/MS 1 1 49077000 26284000 22793000 1762 1011 1942 4393;4394 4038 4038 0 GALQNIIPASTGAAK GKLWRDGRGALQNIIP PASTGAAKAVGKVIPE R G A A K A 4 0 1 0 0 1 0 2 0 2 1 1 0 0 1 1 1 0 0 0 0 0 15 0 1410.7831 P04406;E7EUT5 P04406 201 215 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.00049488 87.519 By MS/MS By MS/MS 2 2 28179000 14788000 13391000 1763 1522 1943;1944 4395;4396;4397;4398 4039;4040;4041;4042;4043;4044;4045 4045 2806;6653 7 GAMAATYSALNR QDAPHLVKGAMAATYS ATYSALNRNQSPVLEP K G A N R N 4 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 1 0 0 0 12 0 1224.5921 P51812 P51812 701 712 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 2 6.2434E-07 121.5 By MS/MS By MS/MS 1 1 17134000 9833200 7300800 1764 1746 1945 4399;4400 4046;4047 4046 7637 2 GAMVATYSALTHKTFQPVLEPVAASSLAQR NDVSHVVKGAMVATYS AASSLAQRRSMKKRTS K G A Q R R 6 1 0 0 0 2 1 1 1 0 3 1 1 1 2 3 3 0 1 3 0 0 30 1 3143.6438 Q9UK32 Q9UK32 705 734 RPS6KA6 Ribosomal protein S6 kinase alpha-6 yes yes 3 0.019521 47.807 By MS/MS 1 0 0 0 1765 2824 1946 4401 4048 4048 5803 1 GANDFMCDEMER TSASIILRGANDFMCD FMCDEMERSLHDALCV R G A E R S 1 1 1 2 1 0 2 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 12 0 1473.5323 F5H282;E7EQR6;P17987;F5GZ03;E7ERF2 F5H282 155 166 TCP1 T-complex protein 1 subunit alpha yes no 2 0.0056823 83.397 By MS/MS By matching 1 1 3144400 1665000 1479400 1766 724 1947 4402;4403 4049 4049 1 GANPVEIR EGFEKISKGANPVEIR GANPVEIRRGVMLAVD K G A I R R 1 1 1 0 0 0 1 1 0 1 0 0 0 0 1 0 0 0 0 1 0 0 8 0 854.46102 P10809;E7EXB4;E7ESH4 P10809 134 141 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2 0.023024 82.671 By MS/MS By MS/MS 1 1 5575700 2737900 2837800 1767 1557 1948 4404;4405 4050;4051 4051 2 GANVSWEPGFDGGYLQR VSVVALPKGANVSWEP FDGGYLQRFSVWYTPL K G A Q R F 1 1 1 1 0 1 1 4 0 0 1 0 0 1 1 1 0 1 1 1 0 0 17 0 1851.854 Q9P2J2 Q9P2J2 522 538 IGSF9 Protein turtle homolog A yes yes 2 0.030251 48.741 By matching By MS/MS 1 1 5677300 3268700 2408700 1768 2792 1949 4406;4407 4052 4052 7925 0 GAPANVSSSDLTGR KVSMRLHRGAPANVSS SSSDLTGRQEVSRIPA R G A G R Q 2 1 1 1 0 0 0 2 0 0 1 0 0 0 1 3 1 0 0 1 0 0 14 0 1330.6477 H0Y5S9;H0Y682;P49674 H0Y5S9 86 99 CSNK1E Casein kinase I isoform epsilon yes no 2 0.00081168 99.069 By MS/MS By MS/MS 1 1 6816300 3810100 3006200 1769 1028 1950 4408;4409 4053;4054;4055 4053 1910 3 GAPDPRVDDDSLGEFPVTNSR RTDPLEKRGAPDPRVD EFPVTNSRARKRILEP R G A S R A 1 2 1 4 0 0 1 2 0 0 1 0 0 1 3 2 1 0 0 2 0 0 21 1 2243.0455 J3KMZ8;Q92785 J3KMZ8 132 152 DPF2 Zinc finger protein ubi-d4 yes no 3 0.0015289 61.602 By MS/MS By MS/MS 1 1 35465000 19733000 15732000 1770 1219 1951 4410;4411 4056;4057 4056 2209 2 GAPPGSPEPPALLAAPLAAGACPGGR PTPSPAARGAPPGSPE AGACPGGRSIPSGVSG R G A G R S 7 1 0 0 1 0 1 5 0 0 3 0 0 0 7 1 0 0 0 0 0 0 26 0 2351.2056 Q9Y4B5 Q9Y4B5 258 283 MTCL1 Microtubule cross-linking factor 1 yes yes 3 0.00024611 60.379 By MS/MS 1 3050100 3050100 0 1771 2918 1952 4412 4058;4059 4058 6070 2 GAPSSPATGVLPSPQGK SLSRYFRRGAPSSPAT VLPSPQGKSTSLSKAS R G A G K S 2 0 0 0 0 1 0 3 0 0 1 1 0 0 4 3 1 0 0 1 0 0 17 0 1549.81 Q5SRE5 Q5SRE5 1705 1721 NUP188 Nucleoporin NUP188 homolog yes yes 2 2.6416E-11 127.75 By MS/MS By MS/MS 2 2 73768000 41466000 32302000 1772 2087 1953;1954 4413;4414;4415;4416 4060;4061;4062;4063;4064;4065;4066;4067;4068;4069 4063 4113;4114;4115;6873 10 GASQAGMTGYGMPR GLQMGTNRGASQAGMT MTGYGMPRQIL_____ R G A P R Q 2 1 0 0 0 1 0 4 0 0 0 0 2 0 1 1 1 0 1 0 0 0 14 0 1382.6071 P37802;C9J5W6;Q9UI15 P37802 183 196 TAGLN2;TAGLN3 Transgelin-2;Transgelin-3 yes no 2 0.0010883 82.417 By MS/MS By MS/MS 1 1 9506300 6261700 3244600 1773 1677 1955 4417;4418 4070;4071 4071 7596 2 GATQQILDEAER EACTIVLRGATQQILD QILDEAERSLHDALCV R G A E R S 2 1 0 1 0 2 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 12 0 1329.6525 F8VQ14;F5GWF6;P78371 F8VQ14 377 388 CCT2 T-complex protein 1 subunit beta yes no 2 0.0016754 103.21 By MS/MS 1 3334500 0 3334500 1774 857 1956 4419 4072 4072 1 GAVAAEGASDTEREEPTESQGLAAR SSAMSKLRGAVAAEGA ESQGLAARLRRPSPPE R G A A R L 6 2 0 1 0 1 5 3 0 0 1 0 0 0 1 2 2 0 0 1 0 0 25 1 2501.163 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 907 931 PHRF1 PHD and RING finger domain-containing protein 1 yes no 3 1.6108E-06 79.237 By MS/MS By MS/MS 1 1 125110000 58101000 67005000 1775 329 1957 4420;4421 4073;4074 4073 614 2 GCGVVKFESPEVAER KMENGKSKGCGVVKFE ESPEVAERACRMMNGM K G C E R A 1 1 0 0 1 0 3 2 0 0 0 1 0 1 1 1 0 0 0 3 0 0 15 1 1662.8036 A0A087X0X3;P52272 A0A087X0X3 693 707 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2;3 0.0048625 60.09 By MS/MS By MS/MS 1 2 6496000 3350700 3145300 1776 135 1958 4422;4423;4424 4075;4076 4076 239 2 GCRDSKTPSESIVAISECHTLLSCK QTSGENEKGCRDSKTP CHTLLSCKVQLLGSQE K G C C K V 1 1 0 1 3 0 2 1 1 2 2 2 0 0 1 5 2 0 0 1 0 0 25 2 2834.3361 Q5SWA1 Q5SWA1 584 608 PPP1R15B Protein phosphatase 1 regulatory subunit 15B yes yes 3 0.0081854 56.663 By MS/MS 1 0 0 0 1777 2089 1959 4425 4077 4077 4122;4123;4124;4125;6876 1 GCSPGESASGGLSK DDGTVNGRGCSPGESA SASGGLSKKLLLGSPS R G C S K K 1 0 0 0 1 0 1 4 0 0 1 1 0 0 1 4 0 0 0 0 0 0 14 0 1292.5667 Q9H165 Q9H165 606 619 BCL11A B-cell lymphoma/leukemia 11A yes yes 2 0.017656 57.794 By matching By MS/MS 1 1 11033000 5579400 5453800 1778 2634 1960 4426;4427 4078 4078 5359 1 GCWEVSPTER MANRRVGRGCWEVSPT WEVSPTERRPPAGLRG R G C E R R 0 1 0 0 1 0 2 1 0 0 0 0 0 0 1 1 1 1 0 1 0 0 10 0 1219.5292 A0A087WV76;Q8IZT6 A0A087WV76 9 18 ASPM Abnormal spindle-like microcephaly-associated protein yes no 2 0.0016609 99.539 By MS/MS By MS/MS 2 1 8595900 6244800 2351100 1779 56 1961 4428;4429;4430 4079;4080 4080 103 2 GDAASSPAPAASVGSSQGGAR TFEEALARGDAASSPA GSSQGGARKRQVDADL R G D A R K 6 1 0 1 0 1 0 4 0 0 0 0 0 0 2 5 0 0 0 1 0 0 21 0 1799.8398 E7EXA6;A0A0D9SF58;Q8WVB6;F8WCC1 E7EXA6 59 79 CHTF18 Chromosome transmission fidelity protein 18 homolog yes no 2 0.00031437 74.698 By MS/MS By MS/MS 1 1 22793000 13130000 9662800 1780 313 1962 4431;4432 4081;4082 4081 567 2 GDADMYDLPK FSDLNSTRGDADMYDL ADMYDLPKKEDALLYQ R G D P K K 1 0 0 3 0 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 0 0 10 0 1123.4856 P50402;Q5HY57 P50402 69 78 EMD Emerin yes no 2 0.00075784 104.42 By MS/MS By MS/MS 1 2 30562000 13063000 17499000 1781 1738 1963;1964 4433;4434;4435 4083;4084;4085 4083 218 7632 3 GDADMYDLPKKEDALLYQSK FSDLNSTRGDADMYDL DALLYQSKGYNDDYYE R G D S K G 2 0 0 4 0 1 1 1 0 0 3 3 1 0 1 1 0 0 2 0 0 0 20 2 2299.1042 P50402;Q5HY57 P50402 69 88 EMD Emerin yes no 3 0.0011439 63.546 By MS/MS By matching 1 1 7802300 4168000 3634300 1782 1738 1965 4436;4437 4086 4086 7632 1 GDEASEEGQNGSSPK TRWLNSGRGDEASEEG GQNGSSPKSKTKWTKE R G D P K S 1 0 1 1 0 1 3 3 0 0 0 1 0 0 1 3 0 0 0 0 0 0 15 0 1490.6121 P35611;E7EV99;E7ENY0;H0Y9H2 P35611 453 467 ADD1 Alpha-adducin yes no 2 0.0027312 68.978 By MS/MS 1 2582300 2582300 0 1783 1673 1966 4438 4087;4088 4088 3083;3084 2 GDEELDSLIK RHLQLAIRGDEELDSL EELDSLIKATIAGGGM R G D I K A 0 0 0 2 0 0 2 1 0 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1117.5503 C9J0D1;Q71UI9;P0C0S5;C9J386 C9J0D1 93 102 H2AFV;H2AFZ Histone H2A;Histone H2A.V;Histone H2A.Z yes no 2 5.5588E-05 136.27 By MS/MS By MS/MS 1 1 3255800 1529500 1726300 1784 549 1967 4439;4440 4089;4090 4089 2 GDFCIQVGR DSKPGTIRGDFCIQVG DFCIQVGRTMANLERT R G D G R T 0 1 0 1 1 1 0 2 0 1 0 0 0 1 0 0 0 0 0 1 0 0 9 0 1050.4917 Q32Q12;O60361;P22392;E7ERL0;J3KPD9;P15531 Q32Q12 131 139 NME1-NME2;NME2P1;NME2;NME1 Nucleoside diphosphate kinase;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A yes no 2 0.026871 67.981 By MS/MS By MS/MS 1 1 4539200 2971800 1567500 1785 1409 1968 4441;4442 4091;4092 4092 2 GDLGIEIPAEK SDGIMVARGDLGIEIP GIEIPAEKVFLAQKMM R G D E K V 1 0 0 1 0 0 2 2 0 2 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1140.6027 B4DNK4;H3BTN5;P14618;H3BR70;P30613 B4DNK4 221 231 PKM;PKLR Pyruvate kinase;Pyruvate kinase PKM;Pyruvate kinase PKLR yes no 2 0.0030686 94.409 By MS/MS By MS/MS 1 1 7194800 3855500 3339300 1786 485 1969 4443;4444 4093;4094 4094 2 GDLSDVEEEEEEEMDVDEATGAVK PDLLFAQRGDLSDVEE DEATGAVKKHNGVGGS R G D V K K 2 0 0 4 0 0 8 2 0 0 1 1 1 0 0 1 1 0 0 3 0 0 24 0 2624.0807 Q96ST3 Q96ST3 829 852 SIN3A Paired amphipathic helix protein Sin3a yes yes 2;3 2.8571E-06 83.065 By MS/MS By MS/MS 3 2 115250000 64553000 50700000 1787 2542 1970;1971 4445;4446;4447;4448;4449 4095;4096;4097;4098;4099 4097 340 5131 5 GDLSDVEEEEEEEMDVDEATGAVKK PDLLFAQRGDLSDVEE EATGAVKKHNGVGGSP R G D K K H 2 0 0 4 0 0 8 2 0 0 1 2 1 0 0 1 1 0 0 3 0 0 25 1 2752.1757 Q96ST3 Q96ST3 829 853 SIN3A Paired amphipathic helix protein Sin3a yes yes 3 2.1886E-05 72.578 By MS/MS By MS/MS 1 1 38143000 20689000 17454000 1788 2542 1972 4450;4451 4100;4101 4101 5131 2 GDQPAASGDSDDDEPPPLPR FLLYKIVRGDQPAASG DEPPPLPRLKRRDFTP R G D P R L 2 1 0 5 0 1 1 2 0 0 1 0 0 0 5 2 0 0 0 0 0 0 20 0 2034.8767 O00264 O00264 48 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2;3 2.2989E-06 84.946 By MS/MS By MS/MS 2 2 48293000 21872000 26421000 1789 1327 1973 4452;4453;4454;4455 4102;4103;4104 4102 2393;2394 3 GDSESEEDEDLEVPVPSR PDRVADAKGDSESEED LEVPVPSRFNRRVSVC K G D S R F 0 1 0 3 0 0 5 1 0 0 1 0 0 0 2 3 0 0 0 2 0 0 18 0 1987.8494 P13861 P13861 76 93 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 2 0.0017483 68.034 By MS/MS By matching 1 1 10325000 5093400 5231600 1790 1577 1974 4456;4457 4105 4105 2897;2898 1 GDSIEEILADSEDEEDNEEEER EEEPAQGKGDSIEEIL EDNEEEERSRGKEQRK K G D E R S 1 1 1 4 0 0 9 1 0 2 1 0 0 0 0 2 0 0 0 0 0 0 22 0 2551.0205 Q5JTH9 Q5JTH9 1070 1091 RRP12 RRP12-like protein yes yes 3 1.7664E-14 116.65 By matching By MS/MS 1 1 36730000 19067000 17663000 1791 2077 1975 4458;4459 4106 4106 4092 1 GDVTAEEAAGASPAK SQSSKAPRGDVTAEEA AAGASPAKANGQENGH R G D A K A 5 0 0 1 0 0 2 2 0 0 0 1 0 0 1 1 1 0 0 1 0 0 15 0 1372.647 P49006 P49006 11 25 MARCKSL1 MARCKS-related protein yes yes 2 1.1376E-68 195.23 By MS/MS By MS/MS 1 1 144130000 78674000 65458000 1792 1721 1976 4460;4461 4107;4108 4107 3221 1 GDVTAEEAAGASPAKANGQENGHVK SQSSKAPRGDVTAEEA GQENGHVKSNGDLSPK R G D V K S 6 0 2 1 0 1 3 4 1 0 0 2 0 0 1 1 1 0 0 2 0 0 25 1 2407.1364 P49006 P49006 11 35 MARCKSL1 MARCKS-related protein yes yes 3;4 4.9372E-06 80.016 By MS/MS By MS/MS 6 6 206720000 124480000 82243000 1793 1721 1977;1978;1979 4462;4463;4464;4465;4466;4467;4468;4469;4470;4471;4472;4473 4109;4110;4111;4112;4113;4114;4115;4116 4110 16;17;34 3221 8 GEAAAERPGEAAVASSPSK QFSKTAAKGEAAAERP AVASSPSKANGQENGH K G E S K A 6 1 0 0 0 0 3 2 0 0 0 1 0 0 2 3 0 0 0 1 0 0 19 1 1783.8701 P29966 P29966 12 30 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 0.0069993 59.342 By MS/MS By MS/MS 2 2 28820000 12950000 15871000 1794 1648 1980 4474;4475;4476;4477 4117;4118;4119 4117 3046;3047;3048 3 GEAAAERPGEAAVASSPSKANGQENGHVK QFSKTAAKGEAAAERP GQENGHVKVNGDASPA K G E V K V 7 1 2 0 0 1 4 4 1 0 0 2 0 0 2 3 0 0 0 2 0 0 29 2 2818.3594 P29966 P29966 12 40 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 4 0.00084774 52.685 By MS/MS By matching 1 1 10710000 5999600 4710600 1795 1648 1981 4478;4479 4120;4121 4121 3046;3047;3048 2 GEAVLRPGLDAEPELSPEEQR SGEGAGSKGEAVLRPG ELSPEEQRVLERKLKK K G E Q R V 2 2 0 1 0 1 5 2 0 0 3 0 0 0 3 1 0 0 0 1 0 0 21 1 2291.1394 C9JQV0;Q9BRJ6 C9JQV0 44 64 C7orf50 Uncharacterized protein C7orf50 yes no 3 0.021531 42.711 By MS/MS 1 2120700 2120700 0 1796 602 1982 4480 4122 4122 1 GEDAEESLEEEEALDPLGIMR ________________ LDPLGIMRSKKPKKHP K G E M R S 2 1 0 2 0 0 7 2 0 1 3 0 1 0 1 1 0 0 0 0 0 0 21 0 2331.0424 H7BZZ1;F6TR53;Q53T59 H7BZZ1 7 27 HS1BP3 HCLS1-binding protein 3 yes no 2 3.7019E-05 79.004 By MS/MS 1 7259200 7259200 0 1797 905 1983 4481 4123 4123 1624 1 GEFSASPMLK RSPIRQDRGEFSASPM FSASPMLKSGMSPEQS R G E L K S 1 0 0 0 0 0 1 1 0 0 1 1 1 1 1 2 0 0 0 0 0 0 10 0 1065.5165 Q9UQ35 Q9UQ35 1119 1128 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0017987 94.82 By MS/MS By MS/MS 2 2 42196000 23352000 18844000 1798 2877 1984;1985 4482;4483;4484;4485 4124;4125;4126;4127;4128 4126 374 5949 5 GEGDAPFSEPGTTSTQRPSSPETATK PSPASGRRGEGDAPFS SSPETATKQPSSPYED R G E T K Q 2 1 0 1 0 1 3 3 0 0 0 1 0 1 4 4 5 0 0 0 0 0 26 1 2634.2045 Q9UQ35;I3L182;I3L4D8;I3L1I8;A0A087X1W1 Q9UQ35 304 329 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0024521 52.754 By matching By MS/MS 1 1 22528000 13234000 9293900 1799 2877 1986 4486;4487 4129 4129 7104 1 GEGPGEAGGPLTPR EGEDKKVRGEGPGEAG AGGPLTPRRVSSDLQH R G E P R R 1 1 0 0 0 0 2 5 0 0 1 0 0 0 3 0 1 0 0 0 0 0 14 0 1293.6313 P50548 P50548 515 528 ERF ETS domain-containing transcription factor ERF yes yes 2 0.0058738 86.455 By MS/MS By matching 1 1 17320000 10307000 7012600 1800 1739 1987 4488;4489 4130 4130 6727 1 GELESPKPLVTPGSTLTLLTR KPAAPFPRGELESPKP STLTLLTRAEAGS___ R G E T R A 0 1 0 0 0 0 2 2 0 0 5 1 0 0 3 2 4 0 0 1 0 0 21 1 2208.2365 H0YKN5;Q9GZN2 H0YKN5 149 169 TGIF2 Homeobox protein TGIF2 yes no 3 1.6475E-05 79.382 By MS/MS By MS/MS 1 1 6633100 3791200 2841900 1801 1089 1988 4490;4491 4131;4132;4133 4132 2005 3 GELIPISPSTEVGGSGIGTPPSVLKR SDLSRSSRGELIPISP TPPSVLKRQRKRRVAL R G E K R Q 0 1 0 0 0 0 2 5 0 3 2 1 0 0 4 4 2 0 0 2 0 0 26 1 2547.3908 P10244 P10244 387 412 MYBL2 Myb-related protein B yes yes 3 0.0011992 54.582 By MS/MS 1 3134700 3134700 0 1802 1554 1989 4492 4134 4134 6663 1 GEPAAAAAPEAGASPVEK ASPSAAEKGEPAAAAA AGASPVEKEAPAEGEA K G E E K E 7 0 0 0 0 0 3 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 18 0 1621.7948 P29966 P29966 88 105 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 1.1114E-05 87.49 By MS/MS By MS/MS 1 1 19990000 10436000 9554000 1803 1648 1990 4493;4494 4135;4136 4136 3049 2 GEPNVSYICSR GSAKQLVRGEPNVSYI NVSYICSRYYRAPELI R G E S R Y 0 1 1 0 1 0 1 1 0 1 0 0 0 0 1 2 0 0 1 1 0 0 11 0 1280.5819 P49840;A8MT37;P49841 P49841 273 283 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 2 2.6336E-14 167.93 By MS/MS By MS/MS 1 1 142930000 80495000 62431000 1804 1732;1733 1991 4495;4496 4137;4138;4139;4140;4141;4142;4143;4144 4139 3280;7628 8 GEQVSQNGLPAEQGSPR QQQWDTSKGEQVSQNG PAEQGSPRMAETVDTS K G E P R M 1 1 1 0 0 3 2 3 0 0 1 0 0 0 2 2 0 0 0 1 0 0 17 0 1752.8391 A0A087WUZ3;Q01082 A0A087WUZ3 2126 2142 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 2.9703E-05 94.845 By matching By MS/MS 1 1 4479400 2243300 2236100 1805 53 1992 4497;4498 4145 4145 97 1 GERKAIHTLQDVSTCETK SNTTSSLKGERKAIHT DVSTCETKELLNVGVS K G E T K E 1 1 0 1 1 1 2 1 1 1 1 2 0 0 0 1 3 0 0 1 0 0 18 2 2072.0321 Q5VWN6 Q5VWN6 1725 1742 FAM208B Protein FAM208B yes yes 3 0.014676 40.994 By MS/MS 1 4458200 0 4458200 1806 2120 1993 4499 4146 4146 4206 1 GEVPPKETPK PSQGAEAKGEVPPKET VPPKETPKKKKKFSFK K G E P K K 0 0 0 0 0 0 2 1 0 0 0 2 0 0 3 0 1 0 0 1 0 0 10 1 1080.5815 P49006 P49006 78 87 MARCKSL1 MARCKS-related protein yes yes 2;3 0.00055451 106.79 By MS/MS By MS/MS 5 7 60978000 22173000 38805000 1807 1721 1994 4500;4501;4502;4503;4504;4505;4506;4507;4508;4509;4510;4511 4147;4148;4149;4150;4151;4152;4153;4154;4155;4156 4151 6715 8 GEVPPKETPKK PSQGAEAKGEVPPKET PPKETPKKKKKFSFKK K G E K K K 0 0 0 0 0 0 2 1 0 0 0 3 0 0 3 0 1 0 0 1 0 0 11 2 1208.6765 P49006 P49006 78 88 MARCKSL1 MARCKS-related protein yes yes 2;3 0.0045543 91.307 By MS/MS By MS/MS 2 2 66512000 39960000 26552000 1808 1721 1995 4512;4513;4514;4515 4157;4158;4159 4157 6715 3 GFAFVTFESPADAK DRETNKSRGFAFVTFE FESPADAKDAARDMNG R G F A K D 3 0 0 1 0 0 1 1 0 0 0 1 0 3 1 1 1 0 0 1 0 0 14 0 1485.714 P38159;H0Y6E7;H3BT71;Q96E39;H3BR27;A0A1B0GUK8;Q8N7X1;O75526 P38159 50 63 RBMX;RBMXL1;RBMXL3;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-3;RNA-binding motif protein, X-linked-like-2 no no 2 0.00063698 105.03 By MS/MS By MS/MS 1 1 2084700 0 2084700 1809 1678;1442 1996 4516;4517 4160;4161 4161 2665 2 GFASPLGAGR VSGPGVARGFASPLGA ASPLGAGRASGEQWQP R G F G R A 2 1 0 0 0 0 0 3 0 0 1 0 0 1 1 1 0 0 0 0 0 0 10 0 931.48756 Q8TDN4 Q8TDN4 165 174 CABLES1 CDK5 and ABL1 enzyme substrate 1 yes yes 2 0.01156 69.628 By matching By MS/MS 1 1 1957000 1113000 843930 1810 2381 1997 4518;4519 4162 4162 4765 1 GFDPTASPFCQ ASLKDVFKGFDPTASP PTASPFCQ________ K G F C Q - 1 0 0 1 1 1 0 1 0 0 0 0 0 2 2 1 1 0 0 0 0 0 11 0 1225.5074 Q9UPT8;M0QY97 Q9UPT8 1293 1303 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 2 0.0037624 95.618 By MS/MS 1 0 0 0 1811 2870 1998 4520 4163 4163 5923 1 GFGDGYNGYGGGPGGGNFGGSPGYGGGR SDGYGSGRGFGDGYNG SPGYGGGRGGYGGGGP R G F G R G 0 1 2 1 0 0 0 16 0 0 0 0 0 2 2 1 0 0 3 0 0 0 28 0 2494.0323 P22626 P22626 239 266 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2;3 0.00015293 63.44 By MS/MS By MS/MS 4 3 343600000 168000000 175600000 1812 1618 1999;2000 4521;4522;4523;4524;4525;4526;4527 4164;4165;4166;4167;4168 4167 2994 5 GFGEYSRSPTF DEEIEKMKGFGEYSRS EYSRSPTF________ K G F T F - 0 1 0 0 0 0 1 2 0 0 0 0 0 2 1 2 1 0 1 0 0 0 11 1 1246.5619 D6REL5;Q6UWZ7 D6REL5 350 360 FAM175A BRCA1-A complex subunit Abraxas yes no 2 9.7824E-06 135.1 By MS/MS By MS/MS 1 1 17825000 9845800 7979500 1813 672 2001 4528;4529 4169;4170 4169 1200 2 GFGFVDFNSEEDAK DRETGSSKGFGFVDFN FNSEEDAKAAKEAMED K G F A K A 1 0 1 2 0 0 2 2 0 0 0 1 0 3 0 1 0 0 0 1 0 0 14 0 1560.6733 P19338;H7BY16 P19338 611 624 NCL Nucleolin yes no 2 3.7609E-07 121.29 By MS/MS By MS/MS 2 2 20799000 11456000 9343500 1814 1604 2002;2003 4530;4531;4532;4533 4171;4172;4173;4174 4171 2961 3 GFGFVTFDDHDPVDK DRQSGKKRGFGFVTFD DDHDPVDKIVLQKYHT R G F D K I 0 0 0 4 0 0 0 2 1 0 0 1 0 3 1 0 1 0 0 2 0 0 15 0 1694.7577 P22626;A0A087WUI2 P22626 154 168 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3 0.0026783 90.689 By MS/MS By MS/MS 1 1 5823500 1831600 3991900 1815 1618 2004 4534;4535 4175;4176 4176 2 GFGSVEELCTNSSLGMEK DSIATLPKGFGSVEEL NSSLGMEKSFATKNEA K G F E K S 0 0 1 0 1 0 3 3 0 0 2 1 1 1 0 3 1 0 0 1 0 0 18 0 1943.8605 B5MDQ0;Q2NKX8 B5MDQ0 694 711 ERCC6L DNA excision repair protein ERCC-6-like yes no 2 1.0143E-05 92.211 By MS/MS By MS/MS 2 2 30471000 17896000 12575000 1816 508 2005;2006 4536;4537;4538;4539 4177;4178;4179;4180;4181 4179 57 946 5 GFNEGLWEIQNNPHASYSAPPQ YGKPNKRKGFNEGLWE ASYSAPPQ________ K G F P Q - 2 0 3 0 0 2 2 2 1 1 1 0 0 1 3 2 0 1 1 0 0 0 22 0 2455.1193 M0R0J3 M0R0J3 76 97 HDGFRP2 yes yes 3 0.0038783 57.338 By MS/MS By matching 1 1 8058600 3915600 4143000 1817 1313 2007 4540;4541 4182;4183 4182 2 GFQFVSSSLPDICYR RGGFTSDRGFQFVSSS SLPDICYRCGESGHLA R G F Y R C 0 1 0 1 1 1 0 1 0 1 1 0 0 2 1 3 0 0 1 1 0 0 15 0 1774.8349 P62633 P62633 42 56 CNBP Cellular nucleic acid-binding protein yes yes 2 0.027285 52.265 By MS/MS By matching 1 1 11866000 6839300 5027000 1818 1797 2008 4542;4543 4184 4184 1 GFSDSGGGPPAK RGSLLLRRGFSDSGGG SGGGPPAKQRDLEGAV R G F A K Q 1 0 0 1 0 0 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 12 0 1075.4934 Q9H307;G3V5F0;G3V579 Q9H307 64 75 PNN Pinin yes no 2 1.2159E-06 120.59 By MS/MS 1 40271000 40271000 0 1819 2651 2009 4544 4185;4186 4186 5404 2 GFSFVATGLMEDDGKPR AGAHQLFRGFSFVATG MEDDGKPRAPQAPLHS R G F P R A 1 1 0 2 0 0 1 3 0 0 1 1 1 2 1 1 1 0 0 1 0 0 17 1 1825.8669 E9PGT3;Q15418;Q5SVM6 E9PGT3 367 383 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 yes no 2 0.00032616 81.656 By MS/MS By matching 1 1 6185800 3382700 2803100 1820 796 2010 4545;4546 4187 4187 1428 1 GFSLEELR HTKVRAGRGFSLEELR GFSLEELRVAGIHKKV R G F L R V 0 1 0 0 0 0 2 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 949.4869 P26373;J3QSB4 P26373 75 82 RPL13 60S ribosomal protein L13 yes no 2 0.0069414 99.013 By MS/MS By MS/MS 2 2 5236600 3040200 2196400 1821 1636 2011;2012 4547;4548;4549;4550 4188;4189;4190;4191 4190 3024 4 GFSQYGVSGSPTK SAVPHQGRGFSQYGVS GVSGSPTKSKVTSCPG R G F T K S 0 0 0 0 0 1 0 3 0 0 0 1 0 1 1 3 1 0 1 1 0 0 13 0 1313.6252 Q9NXC5 Q9NXC5 757 769 MIOS WD repeat-containing protein mio yes yes 2 1.9383E-12 153.41 By MS/MS By MS/MS 1 1 34621000 17733000 16888000 1822 2751 2013 4551;4552 4192;4193 4193 5626 2 GFSVVADTPELQR EFEKNKGKGFSVVADT ADTPELQRIKKTQDQI K G F Q R I 1 1 0 1 0 1 1 1 0 0 1 0 0 1 1 1 1 0 0 2 0 0 13 0 1417.7201 C9J9W2;Q14847 C9J9W2 61 73 LASP1 LIM and SH3 domain protein 1 yes no 2 0.0016729 110.25 By MS/MS By MS/MS 1 1 6149200 3097400 3051900 1823 574 2014 4553;4554 4194;4195 4194 6375 2 GFTECEMTKSSPLK KNSSTEPKGFTECEMT MTKSSPLKITLFLEED K G F L K I 0 0 0 0 1 0 2 1 0 0 1 2 1 1 1 2 2 0 0 0 0 0 14 1 1613.7429 Q9NQW6 Q9NQW6 508 521 ANLN Actin-binding protein anillin yes yes 3 0.0016926 73.208 By MS/MS By MS/MS 1 1 5158200 2440900 2717300 1824 2713 2015 4555;4556 4196;4197 4196 5537;7060 2 GFYESLAK STFTMEKRGFYESLAK GFYESLAKVKPGNFKV R G F A K V 1 0 0 0 0 0 1 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 8 0 913.45453 Q9HB21 Q9HB21 343 350 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 2 0.0034388 104.75 By MS/MS By MS/MS 1 1 13963000 7905300 6057900 1825 2685 2016 4557;4558 4198;4199 4198 5476;7896 2 GGAAGGALPTSPGPALGAK ________________ PGPALGAKGALKAGVG R G G A K G 5 0 0 0 0 0 0 6 0 0 2 1 0 0 3 1 1 0 0 0 0 0 19 0 1548.826 Q9UPR0 Q9UPR0 7 25 PLCL2 Inactive phospholipase C-like protein 2 yes yes 2 1.6941E-09 115.53 By MS/MS By MS/MS 1 1 18924000 10638000 8285800 1826 2869 2017 4559;4560 4200;4201 4200 5915 2 GGAPDPSPGATATPGAPAQPSSPDAR RGRKPRVRGGAPDPSP QPSSPDARRNGQEKHF R G G A R R 6 1 0 2 0 1 0 4 0 0 0 0 0 0 7 3 2 0 0 0 0 0 26 0 2329.0935 O95365 O95365 505 530 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 3 1.2521E-05 72.227 By MS/MS By MS/MS 1 1 26624000 15574000 11051000 1827 1486 2018 4561;4562 4202;4203 4203 2752;2753 2 GGCPGGEATLSQPPPR SRGRGRARGGCPGGEA TLSQPPPRGGTRGQEP R G G P R G 1 1 0 0 1 1 1 4 0 0 1 0 0 0 4 1 1 0 0 0 0 0 16 0 1579.7413 P20290 P20290 20 35 BTF3 Transcription factor BTF3 yes yes 2 0.0002402 88.951 By MS/MS By MS/MS 1 1 10425000 6444000 3981200 1828 1609 2019 4563;4564 4204;4205 4205 2971 2 GGCVSPERGPTFNPK HQRIHRVRGGCVSPER RGPTFNPKHALKPRPK R G G P K H 0 1 1 0 1 0 1 3 0 0 0 1 0 1 3 1 1 0 0 1 0 0 15 1 1601.762 Q9ULD5 Q9ULD5 600 614 ZNF777 Zinc finger protein 777 yes yes 2 0.022421 56.482 By MS/MS 1 2618900 0 2618900 1829 2842 2020 4565 4206 4206 1 GGDAKSPVLQEK GTQERLSRGGDAKSPV KSPVLQEKGLQASRAP R G G E K G 1 0 0 1 0 1 1 2 0 0 1 2 0 0 1 1 0 0 0 1 0 0 12 1 1227.6459 A6NFI3 A6NFI3 107 118 ZNF316 Zinc finger protein 316 yes yes 2 0.00017969 114.21 By matching By MS/MS 1 1 7753200 3371900 4381300 1830 412 2021 4566;4567 4207 4207 778 1 GGDSIGETPTPGASK AETPRTDRGGDSIGET TPTPGASKRKSRWDET R G G S K R 1 0 0 1 0 0 1 4 0 1 0 1 0 0 2 2 2 0 0 0 0 0 15 0 1372.647 O75533 O75533 319 333 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.024393 55.335 By MS/MS 1 4249900 0 4249900 1831 1443 2022 4568 4208 4208 0 GGEFDEFVNDDTDDDLPISK GGGRRSKKGGEFDEFV DDDLPISKKKKRRKGS K G G S K K 0 0 1 6 0 0 2 2 0 1 1 1 0 2 1 1 1 0 0 1 0 0 20 0 2226.9441 Q6PD62 Q6PD62 914 933 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 2 1.4841E-12 114.74 By MS/MS By MS/MS 1 1 152340000 76234000 76106000 1832 2159 2023 4569;4570 4209;4210 4209 6906 2 GGEFDEFVNDDTDDDLPISKK GGGRRSKKGGEFDEFV DDLPISKKKKRRKGSG K G G K K K 0 0 1 6 0 0 2 2 0 1 1 2 0 2 1 1 1 0 0 1 0 0 21 1 2355.039 Q6PD62 Q6PD62 914 934 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 3 2.2231E-05 76.351 By MS/MS 1 13838000 13838000 0 1833 2159 2024 4571 4211 4211 6906 1 GGESAAKNSNKQDSR G G S R 2 1 2 1 0 1 1 2 0 0 0 2 0 0 0 3 0 0 0 0 0 0 15 2 1547.7288 REV__Q2M1Z3 yes yes 2 0.001924 66.19 By matching By MS/MS 1 1 8644900 4689200 3955700 + 1834 2997 2025 4572;4573 4212 4212 6187;6188 1 GGFDGEYQDDSLDLLR NHREALLKGGFDGEYQ DDSLDLLRYFTVTCYS K G G L R Y 0 1 0 4 0 1 1 3 0 0 3 0 0 1 0 1 0 0 1 0 0 0 16 0 1798.801 Q5F1R6 Q5F1R6 75 90 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 2 0.0001424 88.338 By MS/MS By MS/MS 1 1 6863200 3875400 2987800 1835 2065 2026 4574;4575 4213;4214 4214 7739 2 GGGGNFGPGPGSNFR NFGFGDSRGGGGNFGP PGPGSNFRGGSDGYGS R G G F R G 0 1 2 0 0 0 0 7 0 0 0 0 0 2 2 1 0 0 0 0 0 0 15 0 1376.6222 P22626 P22626 214 228 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2 0.00041523 106.16 By MS/MS 1 8335100 8335100 0 1836 1618 2027 4576 4215 4215 1 GGGLRLPLLPPESPGPLR DYSPRERRGGGLRLPL PESPGPLRQRHVACLA R G G L R Q 0 2 0 0 0 0 1 4 0 0 5 0 0 0 5 1 0 0 0 0 0 0 18 1 1825.0574 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5 A0A0G2JMS7 760 777 SCRIB Protein scribble homolog yes no 3 0.0012377 67.56 By MS/MS By MS/MS 1 1 12415000 7112900 5302300 1837 322 2028 4577;4578 4216;4217;4218 4216 593 3 GGGQSVQFTDIETLKQESPNGSR KGDIYKTRGGGQSVQF QESPNGSRKRRSSTVA R G G S R K 0 1 1 1 0 3 2 4 0 1 1 1 0 1 1 3 2 0 0 1 0 0 23 1 2434.1724 Q02241 Q02241 885 907 KIF23 Kinesin-like protein KIF23 yes yes 3 0.0042251 50.857 By MS/MS By matching 1 1 24068000 11867000 12201000 1838 1838 2029 4579;4580 4219 4219 3440 1 GGGTPDANSLAPPGK FPPNSSGRGGGTPDAN NSLAPPGKAGGGSGPQ R G G G K A 2 0 1 1 0 0 0 4 0 0 1 1 0 0 3 1 1 0 0 0 0 0 15 0 1337.6575 Q5T171;Q9BRQ0 Q5T171 262 276 PYGO2 Pygopus homolog 2 yes no 2 0.0084359 77.068 By MS/MS 1 21537000 0 21537000 1839 2093 2030 4581 4220 4220 6877 1 GGIDNPAITSDQELDDKK LSPVETWKGGIDNPAI DQELDDKKMKKKTHKV K G G K K M 1 0 1 4 0 1 1 2 0 2 1 2 0 0 1 1 1 0 0 0 0 0 18 1 1914.9171 Q13017;A0A0A0MSK6;H0YK04 Q13017 1209 1226 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 0.00041774 73.448 By MS/MS By MS/MS 1 1 20581000 11251000 9330300 1840 1891 2031 4582;4583 4221;4222 4221 3608;6784 2 GGIVDEGALLR VRVVNCARGGIVDEGA VDEGALLRALQSGQCA R G G L R A 1 1 0 1 0 0 1 3 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1098.6033 Q5SZU1;O43175 Q5SZU1 203 213 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 8.7593E-06 130.75 By MS/MS By MS/MS 1 1 6045700 3619800 2425900 1841 1373 2032 4584;4585 4223;4224 4223 2 GGLNTPLHESDFSGVTPQR TNVDTPLKGGLNTPLH FSGVTPQRQVVQTPNT K G G Q R Q 0 1 1 1 0 1 1 3 1 0 2 0 0 1 2 2 2 0 0 1 0 0 19 0 2010.9759 Q99459 Q99459 381 399 CDC5L Cell division cycle 5-like protein yes yes 3 0.015958 50.132 By matching By MS/MS 1 1 3771100 2200600 1570500 1842 2548 2033 4586;4587 4225 4225 1 GGLPPFSEPSSLVPWPPGRSLPK LLGLCQVRGGLPPFSE PPGRSLPKAVRPPLSW R G G P K A 0 1 0 0 0 0 1 3 0 0 3 1 0 1 7 4 0 1 0 1 0 0 23 1 2401.2794 Q5JUK2 Q5JUK2 214 236 SOHLH1 Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1 yes yes 3 0.021045 43.534 By matching By MS/MS 1 1 15582000 7583600 7998300 1843 2078 2034 4588;4589 4226 4226 4093;4094;4095 1 GGLSPANDTGAK EEDNSYNRGGLSPAND PANDTGAKKKKKKQKK R G G A K K 2 0 1 1 0 0 0 3 0 0 1 1 0 0 1 1 1 0 0 0 0 0 12 0 1086.5306 K7EN42;B7Z8J4;P30419 K7EN42 43 54 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes no 2 0.0037483 79.804 By MS/MS By MS/MS 1 1 65374000 34788000 30586000 1844 517 2035 4590;4591 4227;4228;4229 4228 960 3 GGLVSDAYGEDDFSR ________________ YGEDDFSRLGGDEDGY K G G S R L 1 1 0 3 0 0 1 3 0 0 1 0 0 1 0 2 0 0 1 1 0 0 15 0 1586.6849 J3KS14;F5H478;J3KRU5;X6R3T8;J3QLH3;J3QQJ0;Q9UHR5 J3KS14 4 18 SAP30BP SAP30-binding protein yes no 2 0.00046206 88.768 By MS/MS By MS/MS 1 1 3872900 2446100 1426900 1845 884 2036 4592;4593 4230;4231 4231 1589 2 GGNFGFGDSR VQSSRSGRGGNFGFGD NFGFGDSRGGGGNFGP R G G S R G 0 1 1 1 0 0 0 4 0 0 0 0 0 2 0 1 0 0 0 0 0 0 10 0 1012.4363 P22626 P22626 204 213 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2 0.0030788 96.668 By MS/MS By MS/MS 1 1 13409000 6632800 6776300 1846 1618 2037 4594;4595 4232;4233 4233 2 GGNLPPVSPNDSGAK IIIKASAKGGNLPPVS SPNDSGAKIASNPLER K G G A K I 1 0 2 1 0 0 0 3 0 0 1 1 0 0 3 2 0 0 0 1 0 0 15 0 1408.6947 Q9UK61;A0A087X0F1 Q9UK61 1096 1110 FAM208A Protein FAM208A yes no 2 0.000338 103.66 By MS/MS By MS/MS 2 2 26143000 13705000 12438000 1847 2826 2038 4596;4597;4598;4599 4234;4235;4236;4237;4238;4239;4240;4241;4242 4234 5812 9 GGPADPVDYLPAAPR RQYASLPRGGPADPVD DYLPAAPRGLYKEREL R G G P R G 3 1 0 2 0 0 0 2 0 0 1 0 0 0 4 0 0 0 1 1 0 0 15 0 1494.7467 A0A087WZG6;A0A087X1S9;Q8TEW8;A0A087WYL6 A0A087WZG6 913 927 PARD3B Partitioning defective 3 homolog B yes no 2 0.00020436 100.09 By MS/MS By MS/MS 1 1 5671300 3346600 2324700 1848 112 2039 4600;4601 4243;4244 4243 7171 2 GGPASPGGLQGLETR SWAMNMYRGGPASPGG GLQGLETRRLSLPSSK R G G T R R 1 1 0 0 0 1 1 5 0 0 2 0 0 0 2 1 1 0 0 0 0 0 15 0 1395.7106 C9JWC4;Q8NCD3 C9JWC4 384 398 HJURP Holliday junction recognition protein yes no 2 8.0884E-06 112.57 By MS/MS By MS/MS 1 1 51217000 27389000 23828000 1849 612 2040 4602;4603 4245;4246 4245 1119 2 GGPASVPSSSPGTSVK GSPRTQGRGGPASVPS SSPGTSVKKPDPNIKN R G G V K K 1 0 0 0 0 0 0 3 0 0 0 1 0 0 3 5 1 0 0 2 0 0 16 0 1413.71 O43237;J3KRZ2;J3KRI4 O43237 398 413 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 2 7.4393E-05 108.35 By MS/MS By MS/MS 1 1 13175000 6859100 6315800 1850 1374 2041 4604;4605 4247;4248 4247 2516;2517 2 GGPGKLSPR DFALPSSRGGPGKLSP GPGKLSPRKGVSQTGT R G G P R K 0 1 0 0 0 0 0 3 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 867.49265 Q12888 Q12888 1356 1364 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 2 0.0049349 107.97 By MS/MS By MS/MS 1 1 74092000 29363000 44729000 1851 1882 2042 4606;4607 4249;4250;4251 4250 3573 3 GGPISFSSSR TLKNRLRRGGPISFSS PISFSSSRSGRRQLHL R G G S R S 0 1 0 0 0 0 0 2 0 1 0 0 0 1 1 4 0 0 0 0 0 0 10 0 993.48796 P35580 P35580 1931 1940 MYH10 Myosin-10 yes yes 2 0.012421 68.676 By matching By MS/MS 2 2 32167000 15468000 16698000 1852 1671 2043 4608;4609;4610;4611 4252;4253 4252 3076;3077 2 GGRSPDEVTLTSIVPTR RTISRKEKGGRSPDEV LTSIVPTRDGTAPPPQ K G G T R D 0 2 0 1 0 0 1 2 0 1 1 0 0 0 2 2 3 0 0 2 0 0 17 1 1783.9428 Q9UKS6;A0A0C4DGG1;H0YDM6 Q9UKS6 316 332 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 3 0.018633 47.223 By MS/MS 1 2469100 2469100 0 1853 2835 2044 4612 4254 4254 5836 1 GGSDDSSKDPIDVNYEK EVAYSLLRGGSDDSSK PIDVNYEKLKTDIKVV R G G E K L 0 0 1 4 0 0 1 2 0 1 0 2 0 0 1 3 0 0 1 1 0 0 17 1 1824.8014 P09874 P09874 780 796 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.00013523 84.14 By MS/MS By MS/MS 2 2 20063000 9061400 11002000 1854 1550 2045 4613;4614;4615;4616 4255;4256;4257;4258;4259 4257 2849;2850 5 GGSGSGPTIEEVD GFGAQGPKGGSGSGPT GPTIEEVD________ K G G V D - 0 0 0 1 0 0 2 4 0 1 0 0 0 0 1 2 1 0 0 1 0 0 13 0 1203.5255 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 630 642 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.0011592 103.91 By MS/MS By MS/MS 3 3 52690000 28156000 24534000 1855 320 2046;2047 4617;4618;4619;4620;4621;4622 4260;4261;4262;4263 4260 585 4 GGSGSHNWGTVKDELTESPK GLKHEDKRGGSGSHNW DELTESPKYIQKQISY R G G P K Y 0 0 1 1 0 0 2 4 1 0 1 2 0 0 1 3 2 1 0 1 0 0 20 1 2084.9763 Q8NC51 Q8NC51 217 236 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3;4 1.5087E-18 121.5 By MS/MS By MS/MS 4 3 427520000 221800000 205730000 1856 2335 2048 4623;4624;4625;4626;4627;4628;4629 4264;4265;4266;4267;4268;4269 4268 4673;4675;6961 6 GGSGSHNWGTVKDELTESPKYIQK GLKHEDKRGGSGSHNW ESPKYIQKQISYNYSD R G G Q K Q 0 0 1 1 0 1 2 4 1 1 1 3 0 0 1 3 2 1 1 1 0 0 24 2 2617.2772 Q8NC51 Q8NC51 217 240 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3 0.012963 56.914 By MS/MS By matching 1 1 31355000 13740000 17615000 1857 2335 2049 4630;4631 4270 4270 4673;4675;6961 1 GGSGSVLQDEEVLASLER LLDNNLPRGGSGSVLQ EVLASLERATLDFKPL R G G E R A 1 1 0 1 0 1 3 3 0 0 3 0 0 0 0 3 0 0 0 2 0 0 18 0 1844.9116 A0A0D9SG79;Q9NZ09 A0A0D9SG79 229 246 UBAP1 Ubiquitin-associated protein 1 yes no 2 3.1497E-13 123.4 By MS/MS 1 4468000 0 4468000 1858 318 2050 4632 4271 4271 580 1 GGSISVQVNSIKFDSE KKKRGSYRGGSISVQV NSIKFDSE________ R G G S E - 0 0 1 1 0 1 1 2 0 2 0 1 0 1 0 4 0 0 0 2 0 0 16 1 1665.821 A0A0A0MRM9;Q14978 A0A0A0MRM9 693 708 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 1.2802E-120 222.09 By MS/MS By MS/MS 4 2 178830000 142650000 36180000 1859 191 2051;2052 4633;4634;4635;4636;4637;4638 4272;4273;4274;4275;4276;4277;4278;4279;4280;4281 4273 341 9 GGSLGLGGGGGMGPR PGPGSFGRGGSLGLGG GGGGMGPREAEPGELG R G G P R E 0 1 0 0 0 0 0 9 0 0 2 0 1 0 1 1 0 0 0 0 0 0 15 0 1228.5983 Q15768 Q15768 272 286 EFNB3 Ephrin-B3 yes yes 2 0.0091512 61.212 By matching By MS/MS 1 1 12100000 6872500 5227500 1860 2009 2053 4639;4640 4282 4282 3918 1 GGSPAPLPAKVDEATSGLIR GTPAGRARGGSPAPLP EATSGLIRELAAVEDE R G G I R E 3 1 0 1 0 0 1 3 0 1 2 1 0 0 3 2 1 0 0 1 0 0 20 1 1935.0425 A0A087WWH3;Q9NZM4 A0A087WWH3 1359 1378 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein yes no 3 0.0008512 68.569 By MS/MS By MS/MS 1 1 4157100 2209600 1947500 1861 77 2054 4641;4642 4283;4284;4285 4284 134 3 GGSPQMDDIK DSEEPDSRGGSPQMDD SPQMDDIKVFQNEVLG R G G I K V 0 0 0 2 0 1 0 2 0 1 0 1 1 0 1 1 0 0 0 0 0 0 10 0 1046.4703 Q13144 Q13144 542 551 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 2 0.0087532 72.731 By MS/MS By MS/MS 1 1 18416000 8799000 9616900 1862 1900 2055 4643;4644 4286;4287 4286 3634 2 GGTSQVGSPTLLSPAVPSK SLSTPRSRGGTSQVGS LSPAVPSKQKRDRSIL R G G S K Q 1 0 0 0 0 1 0 3 0 0 2 1 0 0 3 4 2 0 0 2 0 0 19 0 1781.9523 Q8IY92 Q8IY92 1063 1081 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2 1.7205E-06 100.77 By MS/MS By MS/MS 1 1 13258000 6867800 6390300 1863 2287 2056 4645;4646 4288;4289 4289 4589 2 GGTTSWGTSGQPSPSYDSSR SGSGIDERGGTTSWGT SPSYDSSRGFTDSPHY R G G S R G 0 1 0 1 0 1 0 4 0 0 0 0 0 0 2 6 3 1 1 0 0 0 20 0 2013.8664 H0YNQ5;Q99081 H0YNQ5 55 74 TCF12 Transcription factor 12 yes no 2 0.003207 64.723 By MS/MS By matching 1 1 15176000 8603000 6572800 1864 1105 2057 4647;4648 4290 4290 2029 1 GGVTGSPEASISGSK NFSKPKGKGGVTGSPE EASISGSKGDLKSSKA K G G S K G 1 0 0 0 0 0 1 4 0 1 0 1 0 0 1 4 1 0 0 1 0 0 15 0 1332.6521 Q09666 Q09666 5726 5740 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.00047941 88.108 By MS/MS By MS/MS 1 1 20740000 9741400 10998000 1865 1871 2058 4649;4650 4291;4292 4291 3534;6774 2 GGVTGSPEASISGSKGDLK NFSKPKGKGGVTGSPE SGSKGDLKSSKASLGS K G G L K S 1 0 0 1 0 0 1 5 0 1 1 2 0 0 1 4 1 0 0 1 0 0 19 1 1745.8796 Q09666 Q09666 5726 5744 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2;3 0.0056638 63.681 By MS/MS By MS/MS 2 2 14079000 6333600 7744900 1866 1871 2059 4651;4652;4653;4654 4293;4294 4294 3534;6774 2 GGYRQQQSQTAY KNEGYMRRGGYRQQQS QQQSQTAY________ R G G A Y - 1 1 0 0 0 4 0 2 0 0 0 0 0 0 0 1 1 0 2 0 0 0 12 1 1385.6324 Q99613;B5ME19 Q99613 902 913 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.011177 69.216 By MS/MS By MS/MS 1 1 16685000 7860000 8824900 1867 509 2060 4655;4656 4295;4296 4296 947 2 GHIENPGDGLFAPLPTYSYCK KHLDYLKKGHIENPGD LPTYSYCKQISAQEFD K G H C K Q 1 0 1 1 1 0 1 3 1 1 2 1 0 1 3 1 1 0 2 0 0 0 21 0 2335.0943 Q5TB30 Q5TB30 703 723 DEPDC1 DEP domain-containing protein 1A yes yes 3 0.007219 55.007 By MS/MS By matching 1 1 5521000 3481300 2039800 1868 2106 2061 4657;4658 4297 4297 4160;6884 1 GHLSRPEAQSLSPYTTSANR GTTEPHSRGHLSRPEA PYTTSANRAKLLAKNR R G H N R A 2 2 1 0 0 1 1 1 1 0 2 0 0 0 2 4 2 0 1 0 0 0 20 1 2171.0719 O94776 O94776 424 443 MTA2 Metastasis-associated protein MTA2 yes yes 3 3.1303E-06 84.436 By MS/MS By MS/MS 1 1 29912000 17474000 12437000 1869 1460 2062 4659;4660 4298;4299 4298 2700 2 GHPHSASSPSER NNSSSETRGHPHSASS SASSPSERVFPMPLPR R G H E R V 1 1 0 0 0 0 1 1 2 0 0 0 0 0 2 4 0 0 0 0 0 0 12 0 1247.5643 C9JZP1;C9J470;E9PHA2;Q15003 C9JZP1 21 32 NCAPH Condensin complex subunit 2 yes no 2 6.2791E-09 136.01 By MS/MS By MS/MS 1 2 10842000 3844900 6997000 1870 561 2063 4661;4662;4663 4300;4301 4301 1031 2 GHREEEQEDLTKDMDEPSPVPNVEEVTLPK TPYTKSKRGHREEEQE VEEVTLPKTVNTKKDS R G H P K T 0 1 1 3 0 1 7 1 1 0 2 2 1 0 4 1 2 0 0 3 0 0 30 2 3446.6148 F8VXC8;Q8TAQ2 F8VXC8 330 359 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 4 0.0034582 47.018 By matching By MS/MS 1 1 10175000 5602400 4572700 1871 925 2064 4664;4665 4302 4302 1660 1 GHTASESDEQQWPEEK GSQRSRKRGHTASESD EQQWPEEKRLKEDILE R G H E K R 1 0 0 1 0 2 4 1 1 0 0 1 0 0 1 2 1 1 0 0 0 0 16 0 1856.7813 Q9NTI5;A9IYQ1 Q9NTI5 1253 1268 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2;3 6.1461E-56 186.42 By MS/MS By MS/MS 2 2 90732000 51535000 39197000 1872 2731 2065 4666;4667;4668;4669 4303;4304;4305;4306;4307 4304 5584;5585;7069 5 GHTESCSCPLQQSPR PVCKEGIRGHTESCSC CPLQQSPRADNSAPGT R G H P R A 0 1 0 0 2 2 1 1 1 0 1 0 0 0 2 3 1 0 0 0 0 0 15 0 1742.7465 C9JGT3;G5E9C5;O76074 C9JGT3 22 36 PDE5A cGMP-specific 3,5-cyclic phosphodiesterase yes no 2 0.012736 58.274 By matching By MS/MS 1 1 4160200 2399300 1760900 1873 592 2066 4670;4671 4308 4308 1082 1 GHYYVPLLR ERIREYLKGHYYVPLL HYYVPLLRAEETSSPV K G H L R A 0 1 0 0 0 0 0 1 1 0 2 0 0 0 1 0 0 0 2 1 0 0 9 0 1116.608 Q86XL3 Q86XL3 474 482 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.00098294 122.79 By MS/MS By MS/MS 1 1 2971200 1300500 1670800 1874 2252 2067 4672;4673 4309;4310 4310 7780 2 GIDPFSLDSLAK GFVVINQKGIDPFSLD FSLDSLAKHGIVALRR K G I A K H 1 0 0 2 0 0 0 1 0 1 2 1 0 1 1 2 0 0 0 0 0 0 12 0 1261.6554 Q92526 Q92526 296 307 CCT6B T-complex protein 1 subunit zeta-2 yes yes 2 0.012008 60.434 By matching By MS/MS 1 1 2201200 1317900 883320 1875 2420 2068 4674;4675 4311 4311 1 GIDSDDVQDNSQLK TPTTETIRGIDSDDVQ VQDNSQLKASTQKAAN R G I L K A 0 0 1 4 0 2 0 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 14 0 1532.6954 A0A075B754;Q96QE3 A0A075B754 611 624 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 3.771E-12 132.24 By MS/MS By MS/MS 1 1 7218600 4408500 2810100 1876 12 2069 4676;4677 4312;4313 4312 25 2 GIENLAFVPSSPDILR ________________ PSSPDILRRLSASPSQ K G I L R R 1 1 1 1 0 0 1 1 0 2 2 0 0 1 2 2 0 0 0 1 0 0 16 0 1726.9254 Q6ZQN7 Q6ZQN7 6 21 SLCO4C1 Solute carrier organic anion transporter family member 4C1 yes yes 2 0.0018392 73.168 By MS/MS By matching 1 1 5438200 3844800 1593300 1877 2179 2070 4678;4679 4314 4314 4355 1 GIGFGDIFKEGSVK VTQPKKIRGIGFGDIF IFKEGSVKLRTRTSSS R G I V K L 0 0 0 1 0 0 1 4 0 2 0 2 0 2 0 1 0 0 0 1 0 0 14 1 1452.7613 Q9Y5K6 Q9Y5K6 213 226 CD2AP CD2-associated protein yes yes 2;3 3.4957E-05 118.16 By MS/MS By MS/MS 2 2 22274000 12932000 9343000 1878 2931 2071 4680;4681;4682;4683 4315;4316 4315 6090 2 GIGFGDIFKEGSVKLR VTQPKKIRGIGFGDIF KEGSVKLRTRTSSSET R G I L R T 0 1 0 1 0 0 1 4 0 2 1 2 0 2 0 1 0 0 0 1 0 0 16 2 1721.9465 Q9Y5K6 Q9Y5K6 213 228 CD2AP CD2-associated protein yes yes 3 0.014791 53.554 By MS/MS By MS/MS 1 1 5973100 3541100 2432000 1879 2931 2072 4684;4685 4317;4318 4317 6090 2 GIGLDESELDSEAELMR TAESHDSKGIGLDESE DSEAELMRSMGLPLQF K G I M R S 1 1 0 2 0 0 4 2 0 1 3 0 1 0 0 2 0 0 0 0 0 0 17 0 1862.8568 Q96RS0 Q96RS0 79 95 TGS1 Trimethylguanosine synthase yes yes 2 3.5098E-22 144.5 By MS/MS By MS/MS 3 3 42318000 23341000 18977000 1880 2535 2073;2074;2075 4686;4687;4688;4689;4690;4691 4319;4320;4321;4322;4323 4322 337 5112;5113 5 GIGTPPNTTPIKNGSPEIK RFESQEMKGIGTPPNT KNGSPEIKLKITKTYM K G I I K L 0 0 2 0 0 0 1 3 0 3 0 2 0 0 4 1 3 0 0 0 0 0 19 1 1920.0316 O96028;D6RIS1;D6R9V2 O96028 107 125 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 3 0.0032253 61.127 By MS/MS By MS/MS 1 1 9223000 4675100 4547900 1881 1508 2076 4692;4693 4324;4325 4324 2796;6651 2 GIISSDGESN PPDWSHMRGIISSDGE ISSDGESN________ R G I S N - 0 0 1 1 0 0 1 2 0 2 0 0 0 0 0 3 0 0 0 0 0 0 10 0 977.43017 Q9BW71 Q9BW71 547 556 HIRIP3 HIRA-interacting protein 3 yes yes 2 0.013687 64.224 By MS/MS By matching 1 1 3850000 3190900 659090 1882 2589 2077 4694;4695 4326 4326 5238;5239;5240 1 GIITAVEPSTPTVLR VLHNTGMKGIITAVEP PSTPTVLRSTSTSSPV K G I L R S 1 1 0 0 0 0 1 1 0 2 1 0 0 0 2 1 3 0 0 2 0 0 15 0 1552.8825 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7;H7C0P3 C9JE98 1872 1886 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.00037004 92.269 By MS/MS By MS/MS 1 1 4102200 2531300 1570900 1883 552 2078 4696;4697 4327;4328 4327 1015;6367 2 GIITDSFGR TIGVKDGRGIITDSFG IITDSFGRHRRALSTT R G I G R H 0 1 0 1 0 0 0 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 9 0 964.49779 C9JUH3;A0A0A0MT72;Q9BSQ5 C9JUH3 282 290 CCM2 Cerebral cavernous malformations 2 protein yes no 2 0.0017866 126.03 By MS/MS By MS/MS 1 1 13764000 7841800 5922000 1884 239 2079 4698;4699 4329;4330 4330 436 1 GIKSEPHSPGIPEIFR GHSSSSSKGIKSEPHS PGIPEIFRTASQRCRD K G I F R T 0 1 0 0 0 0 2 2 1 3 0 1 0 1 3 2 0 0 0 0 0 0 16 1 1762.9366 Q9UJJ2;Q8ND82 Q9UJJ2 73 88 ZNF280C Zinc finger protein 280C yes no 3 0.00012882 86.575 By matching By MS/MS 1 1 19206000 10348000 8858000 1885 2343 2080 4700;4701 4331 4331 4696 1 GILAADESTGSIAK HRIVAPGKGILAADES ESTGSIAKRLQSIGTE K G I A K R 3 0 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 14 0 1331.6933 J3KPS3;P04075;H3BQN4;H3BUH7;H3BPS8 J3KPS3 29 42 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 6.7561E-05 117.14 By MS/MS By MS/MS 3 3 17470000 8489000 8980800 1886 1232 2081;2082 4702;4703;4704;4705;4706;4707 4332;4333;4334;4335;4336;4337 4333 2231;2232 6 GILAADESTGSIAKR HRIVAPGKGILAADES STGSIAKRLQSIGTEN K G I K R L 3 1 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 15 1 1487.7944 J3KPS3;P04075;H3BQN4;H3BUH7;H3BPS8 J3KPS3 29 43 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2;3 5.2416E-35 166.79 By MS/MS By MS/MS 3 2 30408000 15658000 14749000 1887 1232 2083;2084 4708;4709;4710;4711;4712 4338;4339;4340;4341;4342 4342 2231;2232 5 GILHTDSQSQSLR TVMRQMKRGILHTDSQ DSQSQSLRNLNIINTH R G I L R N 0 1 0 1 0 2 0 1 1 1 2 0 0 0 0 3 1 0 0 0 0 0 13 0 1440.7321 Q15678 Q15678 455 467 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 0.0018733 89.507 By MS/MS By MS/MS 1 1 12685000 6155800 6529500 1888 2001 2085 4713;4714 4343;4344 4344 3902;3903;3904 2 GILRTPDTIR KVAANAPKGILRTPDT LRTPDTIRRFQSVPAQ K G I I R R 0 2 0 1 0 0 0 1 0 2 1 0 0 0 1 0 2 0 0 0 0 0 10 1 1140.6615 A0A087WVQ6;Q00610 A0A087WVQ6 394 403 CLTC Clathrin heavy chain;Clathrin heavy chain 1 yes no 3 0.029015 51.727 By MS/MS By matching 1 1 5043500 2907300 2136200 1889 65 2086 4715;4716 4345 4345 1 GILSLPHQASPVSR PTSPLNNKGILSLPHQ HQASPVSRTPSLPAVD K G I S R T 1 1 0 0 0 1 0 1 1 1 2 0 0 0 2 3 0 0 0 1 0 0 14 0 1460.81 O75925 O75925 494 507 PIAS1 E3 SUMO-protein ligase PIAS1 yes yes 2;3 4.1334E-05 112.67 By MS/MS By MS/MS 2 2 43059000 24297000 18762000 1890 1450 2087 4717;4718;4719;4720 4346;4347;4348 4346 2682 2 GILSMANSGPNSNR PNLSHTGRGILSMANS NSGPNSNRSQFFITFR R G I N R S 1 1 3 0 0 0 0 2 0 1 1 0 1 0 1 3 0 0 0 0 0 0 14 0 1416.678 Q13356 Q13356 364 377 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes yes 2 0.0064577 53.751 By MS/MS By matching 1 1 4835200 2280700 2554400 1891 1911 2088 4721;4722 4349 4349 252 3667 1 GIMESPIVR ELDLIFLRGIMESPIV IMESPIVRSLAKAHER R G I V R S 0 1 0 0 0 0 1 1 0 2 0 0 1 0 1 1 0 0 0 1 0 0 9 0 1000.5376 E5RFN8;A0A087X0C7;E5RK50;E5RJK0;E5RK44;E5RI32;E5RIU3;A0A087WVY2;B4DZ84;D3DX48;A0A0A0MRU0;A0A0D9SFF8;D3DX49;A0A0C4DH75;Q14168 E5RFN8 38 46 MPP2 MAGUK p55 subfamily member 2 yes no 2 0.0044294 101.97 By MS/MS By MS/MS 1 1 5873800 3102500 2771300 1892 68 2089 4723;4724 4350;4351 4350 117 2 GINGGPSRMSPK PGPGSEARGINGGPSR GPSRMSPKAQRPLRGA R G I P K A 0 1 1 0 0 0 0 3 0 1 0 1 1 0 2 2 0 0 0 0 0 0 12 1 1199.6081 Q8WWM7;H3BUF6 Q8WWM7 400 411 ATXN2L Ataxin-2-like protein yes no 2 0.010235 77.633 By MS/MS By MS/MS 2 2 65186000 33179000 32007000 1893 2409 2090;2091 4725;4726;4727;4728 4352;4353;4354 4353 4818 2 GIPLATGDTSPEPELLPGAPLPPPK CVTSELLKGIPLATGD GAPLPPPKEVINGNIK K G I P K E 2 0 0 1 0 0 2 3 0 1 4 1 0 0 8 1 2 0 0 0 0 0 25 0 2463.3261 K7EL60;K7ER90;K7EL20;K7ENA8;O75821 K7EL60 33 57 EIF3G Eukaryotic translation initiation factor 3 subunit G yes no 2;3 1.4003E-13 95.622 By MS/MS By MS/MS 3 3 176760000 90518000 86242000 1894 1275 2092;2093 4729;4730;4731;4732;4733;4734 4355;4356;4357;4358;4359;4360;4361;4362 4358 2310;6570;6571 8 GIPLATGDTSPEPELLPGAPLPPPKEVINGNIK CVTSELLKGIPLATGD EVINGNIKTVTEYKID K G I I K T 2 0 2 1 0 0 3 4 0 3 4 2 0 0 8 1 2 0 0 1 0 0 33 1 3330.8075 K7EL60;K7ER90;K7EL20;K7ENA8;O75821 K7EL60 33 65 EIF3G Eukaryotic translation initiation factor 3 subunit G yes no 3 0.0026173 49.486 By MS/MS By MS/MS 1 1 34771000 29655000 5115500 1895 1275 2094 4735;4736 4363;4364 4364 2310;6570;6571 2 GIPNMLLSEEETES GRMFPISRGIPNMLLS LSEEETES________ R G I E S - 0 0 1 0 0 0 4 1 0 1 2 0 1 0 1 2 1 0 0 0 0 0 14 0 1547.7025 F5GYQ2;Q9UI30 F5GYQ2 68 81 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes no 2 0.0045168 68.371 By MS/MS By matching 1 1 22231000 11975000 10256000 1896 865 2095 4737;4738 4365 4365 1554 1 GIQLYDTPYEPEGQSVDSDSESTVSPR ESVRSQHKGIQLYDTP SESTVSPRLRESKLPQ K G I P R L 0 1 0 3 0 2 3 2 0 1 1 0 0 0 3 5 2 0 2 2 0 0 27 0 2955.3258 Q15464 Q15464 293 319 SHB SH2 domain-containing adapter protein B yes yes 3 1.0254E-07 78.717 By MS/MS By matching 1 1 11166000 5748200 5418000 1897 1992 2096 4739;4740 4366 4366 3887 1 GIQYIDLSSDSEDVVSPNCSNTVQEK ISYFKNQRGIQYIDLS CSNTVQEKTFNKDTVI R G I E K T 0 0 2 3 1 2 2 1 0 2 1 1 0 0 1 5 1 0 1 3 0 0 26 0 2883.308 D6RAY8;Q9H4L7 D6RAY8 88 113 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 0.0017453 53.551 By matching By MS/MS 1 1 27397000 14865000 12532000 1898 653 2097 4741;4742 4367 4367 1178 1 GISEDSHLESLQDVGQSAAPTFMISPETVTGTGK MEIAQTQKGISEDSHL ETVTGTGKKCSLPAEE K G I G K K 2 0 0 2 0 2 3 4 1 2 2 1 1 1 2 5 4 0 0 2 0 0 34 0 3488.6617 E7EVA0;P27816 E7EVA0 617 650 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0042496 47.66 By MS/MS By matching 1 1 11462000 8554700 2907400 1899 742 2098 4743;4744 4368 4368 90 1344 1 GISHASSSIVSLAR VQEKRLSRGISHASSS SSIVSLARSHVSSNGG R G I A R S 2 1 0 0 0 0 0 1 1 2 1 0 0 0 0 5 0 0 0 1 0 0 14 0 1383.747 Q6GQQ9;Q5SZ59 Q6GQQ9 98 111 OTUD7B OTU domain-containing protein 7B yes no 2 0.0037054 72.523 By matching By MS/MS 1 1 14212000 7715400 6496800 1900 2141 2099 4745;4746 4369 4369 4256 1 GISPIVFDR KKERKRARGISPIVFD ISPIVFDRSGSSASES R G I D R S 0 1 0 1 0 0 0 1 0 2 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1002.5498 J3QR07;Q96MU7 J3QR07 306 314 YTHDC1 YTH domain-containing protein 1 yes no 2 0.0026135 113.44 By MS/MS By MS/MS 1 1 22249000 10183000 12066000 1901 1254 2100 4747;4748 4370;4371 4370 2269 2 GITQEQMNEFR QILTRDAKGITQEQMN QEQMNEFRASFNHFDR K G I F R A 0 1 1 0 0 2 2 1 0 1 0 0 1 1 0 0 1 0 0 0 0 0 11 0 1351.619 P35609;F6THM6 P35609 749 759 ACTN2 Alpha-actinin-2 yes no 3 0.02389 42.718 By MS/MS 1 0 0 0 1902 1672 2101 4749 4372 4372 1 GIYAYGFEKPSAIQQR NLSESLLRGIYAYGFE KPSAIQQRAILPCIKG R G I Q R A 2 1 0 0 0 2 1 2 0 2 0 1 0 1 1 1 0 0 2 0 0 0 16 1 1826.9315 P60842;J3QKZ9;J3QLN6;J3KS25;J3QR64;J3KTB5;J3QL43;J3QS69;J3KT12;E7EQG2;Q14240;J3KT04;J3KS93;E7EMV8;J3KSN7;J3QQP0;E9PBH4;F8WE11;I3L3H2;P38919 P60842 46 61 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 3 0.0021952 81.703 By MS/MS By matching 1 1 4069300 2416600 1652700 1903 1786 2102 4750;4751 4373 4373 1 GKAKSYHEIGR LFILLGPKGKAKSYHE KSYHEIGRAIATLMSD K G K G R A 1 1 0 0 0 0 1 2 1 1 0 2 0 0 0 1 0 0 1 0 0 0 11 2 1244.6626 Q9Y6R1 Q9Y6R1 332 342 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 yes yes 2 0.013031 61.233 By MS/MS 1 5917800 5917800 0 1904 2954 2103 4752 4374 4374 6135;7965 1 GKASPFEEDQNR GPEKGDQKGKASPFEE PFEEDQNRDLKQGDDD K G K N R D 1 1 1 1 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 12 1 1376.6321 C9JW01;A0A0C4DG68;A0A0A0MR59;Q8TB72 C9JW01 133 144 PUM2 Pumilio homolog 2 yes no 2 5.8311E-06 107.35 By MS/MS By MS/MS 1 1 17024000 8045100 8979000 1905 171 2104 4753;4754 4375;4376 4376 302 1 GKDSLSDDGVDLK ________________ SDDGVDLKTQPVRNTE K G K L K T 0 0 0 4 0 0 0 2 0 0 2 2 0 0 0 2 0 0 0 1 0 0 13 1 1347.6518 P07948;E5RJ37 P07948 8 20 LYN Tyrosine-protein kinase Lyn yes no 2;3 1.839E-79 215.37 By MS/MS By MS/MS 2 2 43700000 22137000 21563000 1906 1541 2105 4755;4756;4757;4758 4377;4378;4379;4380;4381 4377 2833 5 GKEKEPGEQASVPLSPK SLSPIRRKGKEKEPGE ASVPLSPKKGSEASAA K G K P K K 1 0 0 0 0 1 3 2 0 0 1 3 0 0 3 2 0 0 0 1 0 0 17 2 1779.9367 P42858 P42858 1185 1201 HTT Huntingtin yes yes 3 0.0036994 63.706 By MS/MS By MS/MS 1 1 4159900 2373900 1786000 1907 1700 2106 4759;4760 4382;4383 4383 3125 2 GKGGVTGSPEASISGSK KFNFSKPKGKGGVTGS EASISGSKGDLKSSKA K G K S K G 1 0 0 0 0 0 1 5 0 1 0 2 0 0 1 4 1 0 0 1 0 0 17 1 1517.7686 Q09666 Q09666 5724 5740 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0074762 73.36 By MS/MS 1 3524400 3524400 0 1908 1871 2107 4761 4384;4385 4384 3534;6774 2 GKGSPRPQAPK EEEEEKLKGKGSPRPQ SPRPQAPKANGTSALT K G K P K A 1 1 0 0 0 1 0 2 0 0 0 2 0 0 3 1 0 0 0 0 0 0 11 2 1121.6305 A0A0A0MRM9;Q14978 A0A0A0MRM9 544 554 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2;3 0.0062466 95.273 By MS/MS By MS/MS 2 2 201760000 117990000 83775000 1909 191 2108 4762;4763;4764;4765 4386;4387;4388;4389 4386 342 4 GKLEAIITPPPAK LAKKRGSKGKLEAIIT IITPPPAKKAKSPSQK K G K A K K 2 0 0 0 0 0 1 1 0 2 1 2 0 0 3 0 1 0 0 0 0 0 13 1 1333.7969 D6RCF2;O75367 D6RCF2 122 134 H2AFY Histone H2A;Core histone macro-H2A.1 yes no 2;3 3.1383E-21 172.61 By MS/MS By MS/MS 2 2 17428000 9387400 8040600 1910 665 2109 4766;4767;4768;4769 4390;4391;4392 4392 6393 3 GKLPESPK PGGEREERGKLPESPK GKLPESPKRAEEIWQQ R G K P K R 0 0 0 0 0 0 1 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 8 1 854.48617 E9PLT2;E9PKP7;P17480 E9PLT2 66 73 UBTF Nucleolar transcription factor 1 yes no 2 8.3745E-08 139.38 By MS/MS By MS/MS 2 1 13789000 5982900 7806200 1911 817 2110 4770;4771;4772 4393;4394;4395 4393 1462 3 GKLSAEENPDDSEVPSSSGINSTK EKKSLQEKGKLSAEEN SSGINSTKSQDKDVNE K G K T K S 1 0 2 2 0 0 3 2 0 1 1 2 0 0 2 6 1 0 0 1 0 0 24 1 2447.13 Q9Y5Q9 Q9Y5Q9 40 63 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2 5.4137E-14 102.16 By MS/MS 1 16380000 16380000 0 1912 2933 2111 4773 4396 4396 6097 1 GKNSIDASEEKPVMR KESLKVKKGKNSIDAS SEEKPVMRKKRGREDE K G K M R K 1 1 1 1 0 0 2 1 0 1 0 2 1 0 1 2 0 0 0 1 0 0 15 2 1659.825 A0A0B4J1V9;Q9NRZ9;B1ALG6 A0A0B4J1V9 112 126 HELLS Lymphoid-specific helicase yes no 3 0.014847 55.031 By MS/MS By MS/MS 1 1 9053600 4257000 4796600 1913 258 2112 4774;4775 4397;4398 4398 469 2 GKPVDSQTSRSESEIVPK VSTGKIAKGKPVDSQT SESEIVPKVA______ K G K P K V 0 1 0 1 0 1 2 1 0 1 0 2 0 0 2 4 1 0 0 2 0 0 18 2 1942.996 E9PN23;Q9Y450 E9PN23 122 139 HBS1L HBS1-like protein yes no 3 0.00894 55.415 By MS/MS By MS/MS 1 1 10566000 5526200 5040200 1914 830 2113 4776;4777 4399;4400 4400 1500;6453 2 GKRINVELSTK QLNGKEVKGKRINVEL INVELSTKGQKKGPGL K G K T K G 0 1 1 0 0 0 1 1 0 1 1 2 0 0 0 1 1 0 0 1 0 0 11 2 1243.7248 Q96PK6 Q96PK6 139 149 RBM14 RNA-binding protein 14 yes yes 2 0.0073668 71.548 By MS/MS 1 1393800 1393800 0 1915 2524 2114 4778 4401 4401 7011 1 GKSSEPVVIMK QRVAPRARGKSSEPVV SEPVVIMKRSLRTSAK R G K M K R 0 0 0 0 0 0 1 1 0 1 0 2 1 0 1 2 0 0 0 2 0 0 11 1 1173.6427 P46013 P46013 3039 3049 MKI67 Antigen KI-67 yes yes 2 0.0022392 94.781 By MS/MS By MS/MS 1 1 17138000 9647100 7490400 1916 1704 2115 4779;4780 4402;4403 4402 3140 2 GLAAEDSGGDSKDLSEVSETTESTDVK GEACREEKGLAAEDSG TTESTDVKDSSEASDS K G L V K D 2 0 0 4 0 0 4 3 0 0 2 2 0 0 0 5 3 0 0 2 0 0 27 1 2726.2254 P41227 P41227 199 225 NAA10 N-alpha-acetyltransferase 10 yes yes 3 0.00056987 57.735 By matching By MS/MS 1 1 20603000 10573000 10031000 1917 1691 2116 4781;4782 4404 4404 3104;3105 1 GLAAGSAETLPANFR KFRPKDIRGLAAGSAE ETLPANFRVTSSMSSP R G L F R V 4 1 1 0 0 0 1 2 0 0 2 0 0 1 1 1 1 0 0 0 0 0 15 0 1473.7576 Q13136 Q13136 1151 1165 PPFIA1 Liprin-alpha-1 yes yes 2 8.1933E-55 184 By MS/MS By MS/MS 1 1 102490000 57428000 45061000 1918 1899 2117 4783;4784 4405;4406 4405 6788 2 GLAEVQQDGEAEEGATSDGEK EEITCLEKGLAEVQQD GATSDGEKKREGVTPW K G L E K K 3 0 0 2 0 2 5 4 0 0 1 1 0 0 0 1 1 0 0 1 0 0 21 0 2118.9189 Q02952 Q02952 582 602 AKAP12 A-kinase anchor protein 12 yes yes 2 0.0024373 82.449 By matching By MS/MS 1 1 70124000 39685000 30439000 1919 1843 2118 4785;4786 4407 4407 3456;6764 0 GLAEVQQDGEAEEGATSDGEKKR EEITCLEKGLAEVQQD TSDGEKKREGVTPWAS K G L K R E 3 1 0 2 0 2 5 4 0 0 1 2 0 0 0 1 1 0 0 1 0 0 23 2 2403.115 Q02952 Q02952 582 604 AKAP12 A-kinase anchor protein 12 yes yes 3;4 3.4705E-08 85.571 By MS/MS By MS/MS 2 2 111610000 51571000 60036000 1920 1843 2119 4787;4788;4789;4790 4408;4409;4410;4411 4409 3456;6764 4 GLAGPPASPGK GTPTLPPKGLAGPPAS GPPASPGKAQPPKPER K G L G K A 2 0 0 0 0 0 0 3 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 0 950.51853 Q9P206 Q9P206 538 548 KIAA1522 Uncharacterized protein KIAA1522 yes yes 2 0.0035506 83.182 By MS/MS By MS/MS 1 1 11686000 5831600 5854500 1921 2779 2120 4791;4792 4412;4413 4413 5705 2 GLAPNTPGKAR PRTPSKRRGLAPNTPG PNTPGKARKLNTTTMS R G L A R K 2 1 1 0 0 0 0 2 0 0 1 1 0 0 2 0 1 0 0 0 0 0 11 1 1080.604 G3V3N7;O43663;H0YL53 G3V3N7 93 103 PRC1 Protein regulator of cytokinesis 1 yes no 3 0.0050944 70.563 By MS/MS 1 0 0 0 1922 970 2121 4793 4414 4414 6488 1 GLCAIAQAESLR YAEKVATRGLCAIAQA IAQAESLRYKLLGGLA R G L L R Y 3 1 0 0 1 1 1 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1287.6605 P23396;F2Z2S8;H0YF32;H0YCJ7 P23396 95 106 RPS3 40S ribosomal protein S3 yes no 2 0.00065518 109.66 By MS/MS By MS/MS 2 2 7056900 5326700 1730100 1923 1622 2122;2123 4794;4795;4796;4797 4415;4416;4417;4418 4415 2999 4 GLDKEVSYNWDPK LPGKFLGRGLDKEVSY VSYNWDPKDAASKPSG R G L P K D 0 0 1 2 0 0 1 1 0 0 1 2 0 0 1 1 0 1 1 1 0 0 13 1 1549.7413 O14654 O14654 840 852 IRS4 Insulin receptor substrate 4 yes yes 2;3 7.0222E-11 139.74 By MS/MS By MS/MS 2 2 35202000 19824000 15378000 1924 1343 2124 4798;4799;4800;4801 4419;4420;4421;4422 4421 7503 4 GLDRSNSWVNTGGPK VRSIIGSKGLDRSNSW WVNTGGPKAAPWGSNP K G L P K A 0 1 2 1 0 0 0 3 0 0 1 1 0 0 1 2 1 1 0 1 0 0 15 1 1586.7801 A0A1B0GWE0;Q96N67;A0A0U1RRC1 Q96N67 923 937 DOCK7 Dedicator of cytokinesis protein 7 no no 2;3 0.0001196 109.67 By MS/MS By MS/MS 2 2 18809000 9940100 8869300 1925 2519;381 2125 4802;4803;4804;4805 4423;4424;4425;4426 4423 722;723 4 GLDVEDVK IATDVASRGLDVEDVK GLDVEDVKFVINYDYP R G L V K F 0 0 0 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 8 0 873.44436 Q92841 Q92841 481 488 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2 0.011163 143.85 By MS/MS By matching 1 1 2318800 956210 1362600 1926 2441 2126 4806;4807 4427 4427 1 GLERNDSWGSFDLR AKEQRYQRGLERNDSW SWGSFDLRAAIVYHTK R G L L R A 0 2 1 2 0 0 1 2 0 0 2 0 0 1 0 2 0 1 0 0 0 0 14 1 1650.775 Q7Z417 Q7Z417 646 659 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2;3 4.0324E-05 113.01 By MS/MS By MS/MS 2 3 60280000 29338000 30942000 1927 2214 2127 4808;4809;4810;4811;4812 4428;4429;4430;4431 4429 4415 4 GLFSDEEDSEDLFSSQSASK SSETKTQKGLFSDEED FSSQSASKLKGASLLP K G L S K L 1 0 0 3 0 1 3 1 0 0 2 1 0 2 0 6 0 0 0 0 0 0 20 0 2176.9284 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6 F8W7U3 448 467 FAM21A WASH complex subunit FAM21A yes no 3 0.0020366 61.903 By MS/MS By MS/MS 1 1 23471000 14060000 9410900 1928 729 2128 4813;4814 4432;4433 4432 1305 2 GLFSDEEDSEDLFSSQSASKLK SSETKTQKGLFSDEED SQSASKLKGASLLPGK K G L L K G 1 0 0 3 0 1 3 1 0 0 3 2 0 2 0 6 0 0 0 0 0 0 22 1 2418.1074 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6 F8W7U3 448 469 FAM21A WASH complex subunit FAM21A yes no 3 0.00041839 67.396 By MS/MS 1 3293300 3293300 0 1929 729 2129 4815 4434;4435 4435 1305 2 GLFSDEEDSEDLFSSQSASNLK SSETKTQKGLFSDEED SQSASNLKGASLLPGK K G L L K G 1 0 1 3 0 1 3 1 0 0 3 1 0 2 0 6 0 0 0 0 0 0 22 0 2404.0554 A0A0A0MR88;A0A096LPC5;J3KP36;Q9Y4E1 A0A0A0MR88 536 557 FAM21C WASH complex subunit FAM21C yes no 2 6.8815E-14 113.54 By MS/MS By matching 1 1 61946000 39684000 22262000 1930 158 2130 4816;4817 4436 4436 282 1 GLGACTLLGSPR DPEEGFPRGLGACTLL CTLLGSPRHSPSTSPR R G L P R H 1 1 0 0 1 0 0 3 0 0 3 0 0 0 1 1 1 0 0 0 0 0 12 0 1200.6285 O95644;K7ER53 O95644 224 235 NFATC1 Nuclear factor of activated T-cells, cytoplasmic 1 yes no 2 0.00089379 103.83 By matching By MS/MS 1 1 4371600 2836300 1535200 1931 1493 2131 4818;4819 4437 4437 2768 1 GLGAGAGAGEESPATSLPR LWVRWGRRGLGAGAGA SPATSLPRMKKRDFSL R G L P R M 4 1 0 0 0 0 2 5 0 0 2 0 0 0 2 2 1 0 0 0 0 0 19 0 1696.838 O15173 O15173 79 97 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 2 1.9278E-09 119.21 By MS/MS By MS/MS 1 1 20031000 10775000 9255800 1932 1363 2132 4820;4821 4438;4439 4438 2492;6603 2 GLGFSIAGGK ACLARSERGLGFSIAG GFSIAGGKGSTPYRAG R G L G K G 1 0 0 0 0 0 0 4 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 0 905.49707 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5 A0A0G2JMS7 790 799 SCRIB Protein scribble homolog yes no 2 0.004053 81.017 By MS/MS By MS/MS 1 1 3730200 2169000 1561300 1933 322 2133 4822;4823 4440;4441 4440 594 2 GLGHPPSSPLLK SPPGFSAKGLGHPPSS PPSSPLLKKTPLALAG K G L L K K 0 0 0 0 0 0 0 2 1 0 3 1 0 0 3 2 0 0 0 0 0 0 12 0 1201.6819 B9EGQ5;M0QXA7;O95785 B9EGQ5 157 168 WIZ Protein Wiz yes no 2 0.00039592 109.39 By MS/MS By MS/MS 1 1 27098000 14247000 12851000 1934 538 2134 4824;4825 4442;4443;4444;4445;4446 4445 977;978 5 GLGLDDALEPR IGAHSHIRGLGLDDAL LDDALEPRQLPDVVEM R G L P R Q 1 1 0 2 0 0 1 2 0 0 3 0 0 0 1 0 0 0 0 0 0 0 11 0 1154.5932 M0R0Z0;X6R2L4;Q9Y230 M0R0Z0 30 40 RUVBL2 RuvB-like 2 yes no 2 0.0072326 79.974 By MS/MS By matching 1 1 2538900 1541400 997500 1935 1317 2135 4826;4827 4447 4447 1 GLGLDESGLAK IASHSHVKGLGLDESG LDESGLAKQAASGLVG K G L A K Q 1 0 0 1 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1058.5608 Q9Y265 Q9Y265 23 33 RUVBL1 RuvB-like 1 yes yes 2 0.017085 70.256 By matching By MS/MS 1 1 2007200 1302700 704500 1936 2885 2136 4828;4829 4448 4448 1 GLGLGANLTEAQALTPTGPSR RVNSLRPKGLGLGANL LTPTGPSRMPRPDEEQ K G L S R M 3 1 1 0 0 1 1 4 0 0 4 0 0 0 2 1 3 0 0 0 0 0 21 0 2023.0698 Q92917 Q92917 202 222 GPKOW G patch domain and KOW motifs-containing protein yes yes 2 1.238E-07 90.968 By MS/MS By matching 1 1 9429900 5296200 4133700 1937 2447 2137 4830;4831 4449 4449 6988;6989 1 GLGPPSPPAPPR SLPGSPSRGLGPPSPP PSPPAPPRGPAGEAGA R G L P R G 1 1 0 0 0 0 0 2 0 0 1 0 0 0 6 1 0 0 0 0 0 0 12 0 1141.6244 Q13425;A0A140TA73 Q13425 90 101 SNTB2 Beta-2-syntrophin yes no 2 0.00018404 112.02 By MS/MS By MS/MS 1 1 22086000 9948500 12138000 1938 1914 2138 4832;4833 4450;4451;4452;4453;4454 4452 3670 5 GLGRSDFGRDR RGPGSRERGLGRSDFG RSDFGRDRGPFRPEPG R G L D R G 0 3 0 2 0 0 0 3 0 0 1 0 0 1 0 1 0 0 0 0 0 0 11 2 1234.6167 H0YIQ2;P49750 H0YIQ2 709 719 YLPM1 YLP motif-containing protein 1 yes no 2 0.016589 56.563 By MS/MS 1 272720 0 272720 1939 1077 2139 4834 4455 4455 0 GLGSSPDLELLLR DGGPKALKGLGSSPDL PDLELLLRSSQREEGD K G L L R S 0 1 0 1 0 0 1 2 0 0 5 0 0 0 1 2 0 0 0 0 0 0 13 0 1368.7613 Q9NQQ7 Q9NQQ7 332 344 SLC35C2 Solute carrier family 35 member C2 yes yes 2 1.2637E-12 154.23 By MS/MS By MS/MS 1 1 19590000 12398000 7191700 1940 2710 2140 4835;4836 4456;4457 4456 5526 2 GLKEGMNPSYDEYADSDEDQHDAYLER KKLNIKNRGLKEGMNP QHDAYLERMKEEGKIR R G L E R M 2 1 1 5 0 1 4 2 1 0 2 1 1 0 1 2 0 0 3 0 0 0 27 1 3146.3047 Q08945 Q08945 429 455 SSRP1 FACT complex subunit SSRP1 yes yes 3;4 2.741E-27 116.92 By MS/MS By MS/MS 3 3 1255900000 712010000 543910000 1941 1866 2141;2142 4837;4838;4839;4840;4841;4842 4458;4459;4460;4461;4462;4463 4458 241 3510 6 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK PDGVTEIRGLLAQGLR AGESPQPKAAPEASSP R G L P K A 4 1 1 0 0 2 2 5 0 0 5 1 0 0 8 2 0 0 0 0 0 0 31 1 3015.6142 Q96TA1 Q96TA1 655 685 FAM129B Niban-like protein 1 yes yes 3 8.3231E-07 72.499 By MS/MS By matching 1 1 107840000 62952000 44887000 1942 2546 2143 4843;4844 4464;4465 4465 5153 2 GLLPGGTQVLDGTSGFSPAPK EEAKAQARGLLPGGTQ SGFSPAPKLVESPKEG R G L P K L 1 0 0 1 0 1 0 5 0 0 3 1 0 1 3 2 2 0 0 1 0 0 21 0 1998.0422 Q96S94 Q96S94 314 334 CCNL2 Cyclin-L2 yes yes 2;3 0.0024393 64.2 By MS/MS By MS/MS 2 2 50116000 27910000 22206000 1943 2540 2144 4845;4846;4847;4848 4466;4467;4468 4466 5121 3 GLLSNHTGSPR EFQEHCRRGLLSNHTG SNHTGSPRSPSTTYLH R G L P R S 0 1 1 0 0 0 0 2 1 0 2 0 0 0 1 2 1 0 0 0 0 0 11 0 1137.5891 Q13111 Q13111 764 774 CHAF1A Chromatin assembly factor 1 subunit A yes yes 2 0.0035401 83.243 By matching By MS/MS 1 1 24771000 12663000 12107000 1944 1896 2145 4849;4850 4469 4469 3617 1 GLLVRSPVSK RQCGLDSRGLLVRSPV LVRSPVSKSAAAPTVT R G L S K S 0 1 0 0 0 0 0 1 0 0 2 1 0 0 1 2 0 0 0 2 0 0 10 1 1054.6499 C4P092;C4P0A0;C4P093;C4P0B0;C4P0B1;A0A087WYX6;Q5T409;A0A075B6Q7;Q9NRI5 C4P092 92 101 DISC1 Disrupted in schizophrenia 1 protein yes no 2 0.017409 67.749 By MS/MS 1 2798500 2798500 0 1945 9 2146 4851 4470 4470 22 1 GLLYDSDEEDEERPAR RGLGRMRRGLLYDSDE EDEERPARKRRQVERA R G L A R K 1 2 0 3 0 0 4 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 16 1 1892.8388 P49736 P49736 134 149 MCM2 DNA replication licensing factor MCM2 yes yes 2;3 0.0012476 79.23 By MS/MS By MS/MS 2 2 3494100000 1903300000 1590800000 1946 1726 2147 4852;4853;4854;4855 4471;4472;4473;4474 4471 3237 4 GLLYDSDEEDEERPARK RGLGRMRRGLLYDSDE DEERPARKRRQVERAT R G L R K R 1 2 0 3 0 0 4 1 0 0 2 1 0 0 1 1 0 0 1 0 0 0 17 2 2020.9338 P49736 P49736 134 150 MCM2 DNA replication licensing factor MCM2 yes yes 3 0.0085585 56.569 By MS/MS By MS/MS 1 1 520370000 284770000 235600000 1947 1726 2148 4856;4857 4475;4476 4476 3237 2 GLMAGGRPEGQYSEDEDTDTDEYKEAK AAGLLAARGLMAGGRP TDEYKEAKASINPVTG R G L A K A 2 1 0 4 0 1 5 4 0 0 1 2 1 0 1 1 2 0 2 0 0 0 27 2 2990.2724 H0YE35;Q9NPQ8;H0YC88 H0YE35 32 58 RIC8A Synembryn-A yes no 3 1.6892E-05 71.426 By MS/MS By MS/MS 2 2 100020000 58594000 41427000 1948 1067 2149;2150 4858;4859;4860;4861 4477;4478 4477 129 1970 2 GLNPDGTPALSTLGGFSPASKPSSPR QEAKLKAKGLNPDGTP ASKPSSPREVKAEEKS K G L P R E 2 1 1 1 0 0 0 4 0 0 3 1 0 1 5 5 2 0 0 0 0 0 26 1 2510.2765 Q9UK58 Q9UK58 319 344 CCNL1 Cyclin-L1 yes yes 3 0.00041115 59.818 By MS/MS By MS/MS 1 2 160670000 84246000 76428000 1949 2825 2151;2152 4862;4863;4864 4479;4480;4481 4479 5805;5806;5807;5808;5809;7089 3 GLNSPVLIGK QTNIQNLKGLNSPVLI NSPVLIGKSKDPSCVA K G L G K S 0 0 1 0 0 0 0 2 0 1 2 1 0 0 1 1 0 0 0 1 0 0 10 0 996.59678 R4GNB1;Q4L235 R4GNB1 568 577 AASDH Acyl-CoA synthetase family member 4 yes no 2 0.0076495 73.951 By MS/MS By matching 1 1 5767900 2652200 3115700 1950 2050 2153 4865;4866 4482 4482 4015 1 GLNSSFETSPK SSFQGSKRGLNSSFET SSFETSPKKVKWSSTV R G L P K K 0 0 1 0 0 0 1 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 11 0 1165.5615 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63 M0QZ79 51 61 VRK3 Inactive serine/threonine-protein kinase VRK3 yes no 2 1.0853E-53 204.32 By MS/MS By MS/MS 2 2 55358000 31139000 24219000 1951 1295 2154;2155 4867;4868;4869;4870 4483;4484;4485;4486;4487 4483 2331;2332;6578 5 GLNVIGASDQSPLQSPSNLR ACLREKKKGLNVIGAS LQSPSNLRDNPFRTTQ K G L L R D 1 1 2 1 0 2 0 2 0 1 3 0 0 0 2 4 0 0 0 1 0 0 20 0 2052.06 B4DJX4;Q9HAU0;A0JP02;H0YGJ6 B4DJX4 878 897 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes no 3 0.0013338 65.521 By MS/MS By MS/MS 2 2 8559000 5041700 3517300 1952 483 2156;2157 4871;4872;4873;4874 4488;4489;4490 4489 913;914 3 GLPFYAGLSPAGK RERLHGGKGLPFYAGL AGLSPAGKLVAYKRKP K G L G K L 2 0 0 0 0 0 0 3 0 0 2 1 0 1 2 1 0 0 1 0 0 0 13 0 1276.6816 Q8IWI9 Q8IWI9 1449 1461 MGA MAX gene-associated protein yes yes 2 0.014317 62.162 By matching By MS/MS 1 1 3422600 1831900 1590700 1953 2268 2158 4875;4876 4491 4491 4548 1 GLPLGSAVSSPVLFSPVGR TPRTASRKGLPLGSAV VLFSPVGRRSSLSSRG K G L G R R 1 1 0 0 0 0 0 3 0 0 3 0 0 1 3 4 0 0 0 3 0 0 19 0 1839.0254 Q8WUM0 Q8WUM0 36 54 NUP133 Nuclear pore complex protein Nup133 yes yes 2 1.0755E-14 128.74 By MS/MS By MS/MS 1 1 15776000 10282000 5494200 1954 2401 2159 4877;4878 4492;4493 4493 4802;4803;4804 2 GLPPSMER DRVGRQERGLPPSMER GLPPSMERGYPPPRDS R G L E R G 0 1 0 0 0 0 1 1 0 0 1 0 1 0 2 1 0 0 0 0 0 0 8 0 885.43784 P38159;H3BUY5 P38159 348 355 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 2 0.0090601 91.265 By MS/MS By MS/MS 1 5 33021000 13038000 19983000 1955 1678 2160 4879;4880;4881;4882;4883;4884 4494;4495;4496;4497;4498;4499;4500;4501;4502;4503;4504;4505;4506;4507;4508 4504 3090 15 GLPSPYNMSSAPGSR EAASVSSKGLPSPYNM MSSAPGSRSGSRSGSR K G L S R S 1 1 1 0 0 0 0 2 0 0 1 0 1 0 3 4 0 0 1 0 0 0 15 0 1519.7089 P15924 P15924 2812 2826 DSP Desmoplakin yes yes 2 1.3048E-09 126.07 By MS/MS By MS/MS 1 1 11521000 6319700 5201100 1956 1582 2161 4885;4886 4509;4510;4511 4511 2907 3 GLQLTPGIGGMQQHFFDDEDR TRRQSVGRGLQLTPGI HFFDDEDRTVPSTPTL R G L D R T 0 1 0 3 0 3 1 4 1 1 2 0 1 2 1 0 1 0 0 0 0 0 21 0 2360.0855 P12270 P12270 2112 2132 TPR Nucleoprotein TPR yes yes 3 3.3464E-06 84.581 By MS/MS By MS/MS 1 1 10010000 6984600 3025900 1957 1570 2162 4887;4888 4512;4513 4512 6669 2 GLRDSHSSEEDEASSQTDLSQTISK PSPVMTRRGLRDSHSS DLSQTISKKTVRSIQE R G L S K K 1 1 0 3 0 2 3 1 1 1 2 1 0 0 0 7 2 0 0 0 0 0 25 1 2706.2216 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 29 53 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.0024166 55.228 By matching By MS/MS 1 1 41094000 23751000 17343000 1958 218 2163 4889;4890 4514 4514 393;394;395;396 1 GLRDSHSSEEDEASSQTDLSQTISKK PSPVMTRRGLRDSHSS LSQTISKKTVRSIQEA R G L K K T 1 1 0 3 0 2 3 1 1 1 2 2 0 0 0 7 2 0 0 0 0 0 26 2 2834.3166 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 29 54 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.0091005 48.958 By MS/MS By matching 1 1 40319000 22286000 18034000 1959 218 2164 4891;4892 4515 4515 393;394;395;396 1 GLSAPDLR LSLSNKNRGLSAPDLR GLSAPDLRSVGLTPGQ R G L L R S 1 1 0 1 0 0 0 1 0 0 2 0 0 0 1 1 0 0 0 0 0 0 8 0 827.45012 Q9P266 Q9P266 1042 1049 KIAA1462 Junctional protein associated with coronary artery disease yes yes 2 0.0086452 92.239 By MS/MS By matching 1 1 12145000 7350200 4794700 1960 2784 2165 4893;4894 4516 4516 5715 1 GLSASLPDLDSENWIEVK SNLKTLPKGLSASLPD SENWIEVKKRPRPSPA K G L V K K 1 0 1 2 0 0 2 1 0 1 3 1 0 0 1 3 0 1 0 1 0 0 18 0 1971.9789 Q6PKG0;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 544 561 LARP1 La-related protein 1 yes no 2 1.8186E-67 183.75 By MS/MS By MS/MS 1 1 256810000 222250000 34561000 1961 2162 2166 4895;4896 4517;4518 4517 4303 2 GLSASLPDLDSENWIEVKK SNLKTLPKGLSASLPD ENWIEVKKRPRPSPAR K G L K K R 1 0 1 2 0 0 2 1 0 1 3 2 0 0 1 3 0 1 0 1 0 0 19 1 2100.0739 Q6PKG0;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 544 562 LARP1 La-related protein 1 yes no 3 0.0016954 60.246 By MS/MS 1 2292300 2292300 0 1962 2162 2167 4897 4519;4520 4520 4303 2 GLSASTMDLSSSS AAPLQVSRGLSASTMD TMDLSSSS________ R G L S S - 1 0 0 1 0 0 0 1 0 0 2 0 1 0 0 6 1 0 0 0 0 0 13 0 1241.5445 Q9NSK0 Q9NSK0 607 619 KLC4 Kinesin light chain 4 yes yes 2 0.0061768 69.451 By MS/MS By MS/MS 2 1 7748900 4659500 3089500 1963 2729 2168 4898;4899;4900 4521;4522;4523 4521 5577;5578;7066 3 GLSDHVSLDGQELGTR CDSVEHLRGLSDHVSL DGQELGTRSGGRRGSD R G L T R S 0 1 0 2 0 1 1 3 1 0 3 0 0 0 0 2 1 0 0 1 0 0 16 0 1682.8224 Q7L8J4 Q7L8J4 356 371 SH3BP5L SH3 domain-binding protein 5-like yes yes 2;3 0.0054348 64.275 By MS/MS By MS/MS 2 2 15697000 10027000 5670000 1964 2203 2169 4901;4902;4903;4904 4524;4525;4526 4525 4390 3 GLSEDTTEETLK PSKTLFVKGLSEDTTE DTTEETLKESFDGSVR K G L L K E 0 0 0 1 0 0 3 1 0 0 2 1 0 0 0 1 3 0 0 0 0 0 12 0 1321.6249 P19338;H7BY16 P19338 578 589 NCL Nucleolin yes no 2 8.4528E-07 123.26 By MS/MS By MS/MS 1 1 8680300 5539900 3140400 1965 1604 2170 4905;4906 4527;4528 4528 2962 2 GLSEDTTEETLKESFDGSVR PSKTLFVKGLSEDTTE ESFDGSVRARIVTDRE K G L V R A 0 1 0 2 0 0 4 2 0 0 2 1 0 1 0 3 3 0 0 1 0 0 20 1 2199.0179 P19338;H7BY16 P19338 578 597 NCL Nucleolin yes no 2;3 0.0063122 69.081 By MS/MS By MS/MS 2 2 7277700 5309800 1967800 1966 1604 2171;2172 4907;4908;4909;4910 4529;4530;4531 4530 2962 3 GLSGPCRPPPPPQAR SGSGRAGRGLSGPCRP PPPPPQARGLLTEIRA R G L A R G 1 2 0 0 1 1 0 2 0 0 1 0 0 0 6 1 0 0 0 0 0 0 15 1 1585.8147 Q9UEE5 Q9UEE5 26 40 STK17A Serine/threonine-protein kinase 17A yes yes 3 0.0039481 62.042 By MS/MS By MS/MS 1 1 8382700 4234500 4148200 1967 2806 2173 4911;4912 4532;4533 4532 5750 2 GLSHSPWAVK YLMKRSPRGLSHSPWA SHSPWAVKKINPICND R G L V K K 1 0 0 0 0 0 0 1 1 0 1 1 0 0 1 2 0 1 0 1 0 0 10 0 1080.5716 E5RFX4;Q96KB5 E5RFX4 21 30 PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 2 0.0016666 99.343 By matching By MS/MS 1 1 9727200 6314400 3412800 1968 694 2174 4913;4914 4534 4534 1234 1 GLSIPRADTLDEY KVQALKDRGLSIPRAD RADTLDEY________ R G L E Y - 1 1 0 2 0 0 1 1 0 1 2 0 0 0 1 1 1 0 1 0 0 0 13 1 1448.7147 O15116 O15116 121 133 LSM1 U6 snRNA-associated Sm-like protein LSm1 yes yes 2 0.011966 90.412 By MS/MS By MS/MS 1 2 5729100 2251900 3477200 1969 1358 2175 4915;4916;4917 4535;4536;4537 4537 2482 3 GLSLVDKENTPPALSGTR QLQLSPLKGLSLVDKE PPALSGTRVLASKTAR K G L T R V 1 1 1 1 0 0 1 2 0 0 3 1 0 0 2 2 2 0 0 1 0 0 18 1 1853.9847 P31350 P31350 24 41 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 3 0.00062558 73.498 By MS/MS By MS/MS 1 1 3581500 2011700 1569800 1970 1659 2176 4918;4919 4538;4539 4539 6695 2 GLSPAMSPALQR NLASLTPKGLSPAMSP AMSPALQRLVSRTASK K G L Q R L 2 1 0 0 0 1 0 1 0 0 2 0 1 0 2 2 0 0 0 0 0 0 12 0 1226.6441 Q96DF8 Q96DF8 389 400 DGCR14 Protein DGCR14 yes yes 2 0.0010247 95.981 By MS/MS By MS/MS 2 2 10712000 7620600 3091700 1971 2473 2177;2178 4920;4921;4922;4923 4540;4541;4542;4543 4542 330 4979;4980 4 GLSPAQADSQFLENAK AELHKTHRGLSPAQAD SQFLENAKRLSMYGVD R G L A K R 3 0 1 1 0 2 1 1 0 0 2 1 0 1 1 2 0 0 0 0 0 0 16 0 1674.8213 O43491;E9PK52;E9PHY5;E9PII3 O43491 384 399 EPB41L2 Band 4.1-like protein 2 yes no 2 0.0079159 61.127 By MS/MS By MS/MS 1 1 4532300 2655700 1876600 1972 1387 2179 4924;4925 4544;4545 4545 2539 2 GLSPPQCLPR GSIAASGRGLSPPQCL SPPQCLPRNYDAQPPG R G L P R N 0 1 0 0 1 1 0 1 0 0 2 0 0 0 3 1 0 0 0 0 0 0 10 0 1123.5808 O94885;A0A087WW74 O94885 921 930 SASH1 SAM and SH3 domain-containing protein 1 yes no 2 0.012224 68.893 By matching By MS/MS 1 1 2298600 1095700 1202900 1973 1467 2180 4926;4927 4546 4546 2719 1 GLSSGWSSPLLPAPVCNPNK VSCCSLLRGLSSGWSS APVCNPNKAIFTVDAK R G L N K A 1 0 2 0 1 0 0 2 0 0 3 1 0 0 4 4 0 1 0 1 0 0 20 0 2080.0412 Q96RG2 Q96RG2 113 132 PASK PAS domain-containing serine/threonine-protein kinase yes yes 2 4.9197E-05 79.393 By matching By MS/MS 1 1 12305000 7252700 5052400 1974 2534 2181 4928;4929 4547 4547 5110 1 GLSSSEKDNIER SWVSPRKRGLSSSEKD SEKDNIERQAIENCER R G L E R Q 0 1 1 1 0 0 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 12 1 1333.6474 Q8IYH5 Q8IYH5 87 98 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 4.6663E-14 161.21 By MS/MS By MS/MS 1 1 47010000 26925000 20084000 1975 2288 2182 4930;4931 4548;4549;4550 4549 4591 3 GLSTSLPDLDSEPWIEVK SILQAMSRGLSTSLPD SEPWIEVKKRHQPAPV R G L V K K 0 0 0 2 0 0 2 1 0 1 3 1 0 0 2 3 1 1 0 1 0 0 18 0 1984.9993 H0Y9K3;D6R9W6;D6RJB0;Q659C4 H0Y9K3 328 345 LARP1B La-related protein 1B yes no 2 4.2159E-06 101.39 By MS/MS By matching 1 1 14700000 9778200 4921700 1976 648 2183 4932;4933 4551 4551 1165 1 GLSVDSAQEVK SVSSSIKRGLSVDSAQ VDSAQEVKRFRTATGA R G L V K R 1 0 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 11 0 1131.5772 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1771 1781 TRRAP Transformation/transcription domain-associated protein yes no 2 1.0151E-05 120.55 By MS/MS By MS/MS 1 1 22309000 11318000 10991000 1977 850 2184 4934;4935 4552;4553 4553 1536 2 GLSVDSAQEVKR SVSSSIKRGLSVDSAQ DSAQEVKRFRTATGAI R G L K R F 1 1 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 12 1 1287.6783 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1771 1782 TRRAP Transformation/transcription domain-associated protein yes no 2;3 0.00065699 107.93 By MS/MS By MS/MS 2 2 71741000 40403000 31338000 1978 850 2185 4936;4937;4938;4939 4554;4555;4556;4557 4555 1536 4 GLTSVINQK LPCILNARGLTSVINQ LTSVINQKLKDDEVAQ R G L Q K L 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 958.54475 P07195 P07195 300 308 LDHB L-lactate dehydrogenase B chain yes yes 2 0.0059897 100.45 By MS/MS By MS/MS 1 1 16080000 8952500 7127900 1979 1535 2186 4940;4941 4558;4559 4559 2 GLVAAYSGDSDNEEELVER DEENPLKRGLVAAYSG NEEELVERLESEEEKL R G L E R L 2 1 1 2 0 0 4 2 0 0 2 0 0 0 0 2 0 0 1 2 0 0 19 0 2051.9284 P52756 P52756 615 633 RBM5 RNA-binding protein 5 yes yes 2 3.4569E-10 119.47 By MS/MS By MS/MS 1 1 22722000 11231000 11492000 1980 1756 2187 4942;4943 4560;4561;4562 4562 3315 3 GLVAAYSGESDSEEEQER DDRPSPPRGLVAAYSG DSEEEQERGGPEREEK R G L E R G 2 1 0 1 0 1 5 2 0 0 1 0 0 0 0 3 0 0 1 1 0 0 18 0 1954.8392 A0A0A0MR66;P98175 A0A0A0MR66 792 809 RBM10 RNA-binding protein 10 yes no 2 0.0032882 63.727 By MS/MS By MS/MS 1 1 13380000 6527800 6852200 1981 172 2188 4944;4945 4563;4564;4565 4563 304;305;306 3 GLWSTDSAEEDKETK RRLSGEERGLWSTDSA AEEDKETKRNESKEKY R G L T K R 1 0 0 2 0 0 3 1 0 0 1 2 0 0 0 2 2 1 0 0 0 0 15 1 1694.7635 Q99549;A0A0A0MT47 Q99549 397 411 MPHOSPH8 M-phase phosphoprotein 8 yes no 3 0.00016796 99.711 By MS/MS By MS/MS 1 1 17725000 9079400 8646000 1982 2551 2189 4946;4947 4566;4567 4567 5159 2 GLWSTDSAEEDKETKR RRLSGEERGLWSTDSA EEDKETKRNESKEKYQ R G L K R N 1 1 0 2 0 0 3 1 0 0 1 2 0 0 0 2 2 1 0 0 0 0 16 2 1850.8646 Q99549;A0A0A0MT47 Q99549 397 412 MPHOSPH8 M-phase phosphoprotein 8 yes no 3 0.029735 47.621 By MS/MS By matching 1 1 9038900 5263100 3775900 1983 2551 2190 4948;4949 4568 4568 5159 1 GLYDGPVCEVSVTPK AELRGVPRGLYDGPVC CEVSVTPKTVTPASSA R G L P K T 0 0 0 1 1 0 1 2 0 0 1 1 0 0 2 1 1 0 1 3 0 0 15 0 1619.7865 A0A1C7CYX9;Q16555 A0A1C7CYX9 602 616 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 6.1512E-20 144.08 By MS/MS By MS/MS 1 1 44461000 23587000 20875000 1984 385 2191 4950;4951 4569;4570 4569 6322 2 GMARYVCSICDQGNFRK RLHNDMHKGMARYVCS CDQGNFRKHDHVRHMI K G M R K H 1 2 1 1 2 1 0 2 0 1 0 1 1 1 0 1 0 0 1 1 0 0 17 2 2060.9343 Q9Y2K1 Q9Y2K1 630 646 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes yes 3 0.027235 46.926 By MS/MS 1 0 0 0 1985 2892 2192 4952 4571 4571 7950 1 GMGPGTPAGYGR PVGGQGPRGMGPGTPA GTPAGYGRGREEYEGP R G M G R G 1 1 0 0 0 0 0 5 0 0 0 0 1 0 2 0 1 0 1 0 0 0 12 0 1119.5131 P23246 P23246 682 693 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.015772 73.881 By MS/MS By matching 2 2 63364000 33935000 29429000 1986 1620 2193;2194 4953;4954;4955;4956 4572;4573 4572 202 2 GMGSLDAMDK GIRLKKYRGMGSLDAM GSLDAMDKHLSSQNRY R G M D K H 1 0 0 2 0 0 0 2 0 0 1 1 2 0 0 1 0 0 0 0 0 0 10 0 1023.4365 H0Y4R1;P12268 H0Y4R1 369 378 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 2 0.0018425 93.839 By MS/MS By MS/MS 2 2 27814000 15036000 12778000 1987 1018 2195;2196 4957;4958;4959;4960 4574;4575;4576 4574 123 1885 3 GMGSLDAMDKHLSSQNR GIRLKKYRGMGSLDAM KHLSSQNRYFSEADKI R G M N R Y 1 1 1 2 0 1 0 2 1 0 2 1 2 0 0 3 0 0 0 0 0 0 17 1 1845.8462 H0Y4R1;P12268 H0Y4R1 369 385 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 3 1.8126E-05 87.228 By MS/MS By MS/MS 1 1 25266000 16577000 8689200 1988 1018 2197 4961;4962 4577;4578 4577 1885 2 GMKDDDYDDQLC DFARLRLKGMKDDDYD DDYDDQLC________ K G M L C - 0 0 0 5 1 1 0 1 0 0 1 1 1 0 0 0 0 0 1 0 0 0 12 1 1473.5388 Q68DZ5;P32121 Q68DZ5 206 217 DKFZp686L0365;ARRB2 Beta-arrestin-2 yes no 2 3.756E-07 126.07 By MS/MS By MS/MS 1 1 19905000 10553000 9352100 1989 1665 2198 4963;4964 4579;4580 4580 7591 2 GMSVYGLGR TNKVASQKGMSVYGLG MSVYGLGRQVYDPKYC K G M G R Q 0 1 0 0 0 0 0 3 0 0 1 0 1 0 0 1 0 0 1 1 0 0 9 0 938.46439 Q15417 Q15417 257 265 CNN3 Calponin-3 yes yes 2 0.0046681 77.058 By MS/MS By MS/MS 1 1 59462000 36845000 22617000 1990 1989 2199 4965;4966 4581;4582 4582 7716 2 GMYDGPVFDLTTTPK ADLHAVPRGMYDGPVF FDLTTTPKGGTPAGSA R G M P K G 0 0 0 2 0 0 0 2 0 0 1 1 1 1 2 0 3 0 1 1 0 0 15 0 1640.7756 H0YBT4;Q14195 H0YBT4 136 150 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 2 0.021514 57.53 By MS/MS By matching 1 1 3299400 1937700 1361700 1991 1054 2200 4967;4968 4583 4583 0 GNAEGSSDEEGKLVIDEPAK AEGDGDKKGNAEGSSD LVIDEPAKEKNEKGAL K G N A K E 2 0 1 2 0 0 4 3 0 1 1 2 0 0 1 2 0 0 0 1 0 0 20 1 2043.9597 P51858 P51858 127 146 HDGF Hepatoma-derived growth factor yes yes 2 0.0083418 68.919 By MS/MS By matching 1 1 90156000 49936000 40220000 1992 1749 2201 4969;4970 4584 4584 3307;3308 1 GNAEGSSDEEGKLVIDEPAKEK AEGDGDKKGNAEGSSD IDEPAKEKNEKGALKR K G N E K N 2 0 1 2 0 0 5 3 0 1 1 3 0 0 1 2 0 0 0 1 0 0 22 2 2301.0972 P51858 P51858 127 148 HDGF Hepatoma-derived growth factor yes yes 3 2.5611E-05 77.668 By MS/MS By MS/MS 1 1 436860000 229330000 207530000 1993 1749 2202 4971;4972 4585;4586 4585 3307;3308 2 GNASPGAATHDSLSDYGPQDSRPTPMR SIKHESYRGNASPGAA DSRPTPMRRVPGRVGG R G N M R R 3 2 1 3 0 1 0 3 1 0 1 0 1 0 4 4 2 0 1 0 0 0 27 1 2784.2522 Q9UGU0 Q9UGU0 963 989 TCF20 Transcription factor 20 yes yes 3 0.01664 41.83 By matching By MS/MS 1 1 13581000 7285200 6295900 1994 2810 2203 4973;4974 4587 4587 5759 1 GNDPLTSSPGR SSPAQRRRGNDPLTSS PLTSSPGRSSRRTDAL R G N G R S 0 1 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 11 0 1099.5258 P49736;C9J013;C9JZ21;F8WDM3 P49736 20 30 MCM2 DNA replication licensing factor MCM2 yes no 2 9.4812E-105 228.7 By MS/MS By MS/MS 2 2 308470000 169110000 139360000 1995 1726 2204;2205 4975;4976;4977;4978 4588;4589;4590;4591;4592 4591 3238;3239 4 GNDPLTSSPGRSSR SSPAQRRRGNDPLTSS SSPGRSSRRTDALTSS R G N S R R 0 2 1 1 0 0 0 2 0 0 1 0 0 0 2 4 1 0 0 0 0 0 14 1 1429.691 P49736;C9J013;C9JZ21;F8WDM3 P49736 20 33 MCM2 DNA replication licensing factor MCM2 yes no 3 0.027738 48.277 By matching By MS/MS 1 1 24896000 13017000 11879000 1996 1726 2206 4979;4980 4593 4593 3238;3239 1 GNFGGSFAGSFGGAGGHAPGVAR DRAIEMERGNFGGSFA GHAPGVARKACQIFVR R G N A R K 4 1 1 0 0 0 0 9 1 0 0 0 0 3 1 2 0 0 0 1 0 0 23 0 2033.9456 A0A087X0X3;P52272;M0R2I7;M0QY96 A0A087X0X3 628 650 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 3 8.3994E-06 76.704 By MS/MS By matching 1 1 4504900 2326300 2178600 1997 135 2207 4981;4982 4594 4594 240 1 GNLELRPGGAHPGTCSPSRPGS HKILRKARGNLELRPG CSPSRPGS________ R G N G S - 1 2 1 0 1 0 1 5 1 0 2 0 0 0 4 3 1 0 0 0 0 0 22 2 2203.0552 A0A0A0MRG9;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 1642 1663 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes no 3 0.0011795 63.488 By MS/MS By matching 1 1 16155000 10317000 5838700 1998 184 2208 4983;4984 4595 4595 326 1 GNPTVEVDLFTSK AREIFDSRGNPTVEVD EVDLFTSKGLFRAAVP R G N S K G 0 0 1 1 0 0 1 1 0 0 1 1 0 1 1 1 2 0 0 2 0 0 13 0 1405.7089 P06733;K7EM90 P06733 16 28 ENO1 Alpha-enolase;Enolase yes no 2 0.0099335 71.153 By MS/MS By matching 1 1 5048900 3266800 1782100 1999 1532 2209 4985;4986 4596 4596 1 GNSDGYIIPINK QMCYQISRGNSDGYII GYIIPINKEGCIPEGD R G N N K E 0 0 2 1 0 0 0 2 0 3 0 1 0 0 1 1 0 0 1 0 0 0 12 0 1289.6616 H0Y3V3;H0Y5C0;B1ALU1;B1ALU3;O95490 H0Y3V3 440 451 ADGRL2;LPHN2 Latrophilin-2 yes no 2 0.0029229 74.962 By MS/MS By matching 1 1 2926500 1471200 1455300 2000 463 2210 4987;4988 4597 4597 7279 1 GNSRPGTPSAEGGSTSSTLR KPSGGSSRGNSRPGTP GSTSSTLRAAASKLEQ R G N L R A 1 2 1 0 0 0 1 4 0 0 1 0 0 0 2 5 3 0 0 0 0 0 20 1 1917.914 M0QXD6;P35269 M0QXD6 299 318 GTF2F1 General transcription factor IIF subunit 1 yes no 3 1.0184E-25 133.93 By MS/MS By MS/MS 2 2 54808000 34055000 20753000 2001 1294 2211;2212 4989;4990;4991;4992 4598;4599;4600;4601 4599 2330;6577 4 GNVVPSPLPTRR ERSPSPLRGNVVPSPL PSPLPTRRTRTFSATV R G N R R T 0 2 1 0 0 0 0 1 0 0 1 0 0 0 3 1 1 0 0 2 0 0 12 1 1291.7361 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 36 47 CARHSP1 Calcium-regulated heat stable protein 1 yes no 3 0.018615 50.484 By MS/MS By matching 1 1 5722000 3606600 2115400 2002 1122 2213 4993;4994 4602 4602 1 GPAADPSSPGTSGVGPAAGAGDSR SSPNQAVRGPAADPSS AAGAGDSRLCLPQRAQ R G P S R L 5 1 0 2 0 0 0 6 0 0 0 0 0 0 4 4 1 0 0 1 0 0 24 0 2037.9352 A0A0U1RRM4 A0A0U1RRM4 148 171 yes yes 2;3 1.0503E-05 77.324 By MS/MS By MS/MS 2 1 14043000 10234000 3808900 2003 353 2214 4995;4996;4997 4603;4604;4605 4603 658;659 3 GPAGEAGASPPVR PSPPAPPRGPAGEAGA AGASPPVRRVRVVKQE R G P V R R 3 1 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 13 0 1164.5887 Q13425;A0A140TA73 Q13425 102 114 SNTB2 Beta-2-syntrophin yes no 2 1.1561E-10 142.39 By MS/MS By MS/MS 1 1 19942000 10265000 9676400 2004 1914 2215 4998;4999 4606;4607;4608;4609 4609 3671 4 GPAGEAGASPPVRR PSPPAPPRGPAGEAGA GASPPVRRVRVVKQEA R G P R R V 3 2 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 14 1 1320.6898 Q13425;A0A140TA73 Q13425 102 115 SNTB2 Beta-2-syntrophin yes no 2;3 0.00075693 108.66 By MS/MS By MS/MS 2 1 27232000 17422000 9810500 2005 1914 2216 5000;5001;5002 4610;4611;4612 4612 3671 3 GPAPAPQQCSEPETK AEVAAPTKGPAPAPQQ QCSEPETKWSSIPASK K G P T K W 2 0 0 0 1 2 2 1 0 0 0 1 0 0 4 1 1 0 0 0 0 0 15 0 1595.725 H0Y4Z8;Q3YEC7;A0A0X1KG72;G3V154 H0Y4Z8 484 498 RABL6 Rab-like protein 6 yes no 2 0.0025968 70.373 By MS/MS 1 2677800 2677800 0 2006 1021 2217 5003 4613 4613 1893 1 GPASPLEAK FDPLSQSRGPASPLEA PASPLEAKKKDSPEEK R G P A K K 2 0 0 0 0 0 1 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 0 868.46543 Q13099 Q13099 130 138 IFT88 Intraflagellar transport protein 88 homolog yes yes 2 0.0026944 112.85 By MS/MS By MS/MS 1 1 7813500 4086000 3727400 2007 1895 2218 5004;5005 4614;4615 4615 3616 2 GPASQFYITPSTSLSPR SKWGMIPRGPASQFYI PSTSLSPRQSGPQWKG R G P P R Q 1 1 0 0 0 1 0 1 0 1 1 0 0 1 3 4 2 0 1 0 0 0 17 0 1807.9105 H0YIQ2;P49750 H0YIQ2 368 384 YLPM1 YLP motif-containing protein 1 yes no 2;3 5.6837E-37 169.64 By MS/MS By MS/MS 2 2 29203000 15067000 14136000 2008 1077 2219 5006;5007;5008;5009 4616;4617;4618;4619 4616 1988;1989;1990;6529 4 GPAYGLSR ________________ GPAYGLSREVQQKIEK R G P S R E 1 1 0 0 0 0 0 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 8 0 819.4239 P37802;X6RJP6 P37802 5 12 TAGLN2 Transgelin-2 yes no 2 0.010991 94.006 By MS/MS By MS/MS 1 1 0 0 0 2009 1677 2220 5010;5011 4620;4621 4620 7597 2 GPDKLLPYPTLASPASD LDSSWVSRGPDKLLPY TLASPASD________ R G P S D - 2 0 0 2 0 0 0 1 0 0 3 1 0 0 4 2 1 0 1 0 0 0 17 1 1740.8934 P0C1Z6 P0C1Z6 237 253 TFPT TCF3 fusion partner yes yes 2 0.0031983 69.045 By matching By MS/MS 1 1 1812700 985050 827650 2010 1551 2221 5012;5013 4622 4622 2851;2852 1 GPGEPDSPTPLHPPTPPILSTDR IIPAPKPKGPGEPDSP PPILSTDRSREDSPEL K G P D R S 0 1 0 2 0 0 1 2 1 1 2 0 0 0 8 2 3 0 0 0 0 0 23 0 2377.1914 Q03164 Q03164 1831 1853 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 1.3601E-14 102.59 By MS/MS By MS/MS 1 1 15996000 8559500 7436200 2011 1846 2222 5014;5015 4623;4624 4624 3468 1 GPGQPSSPQR RGGGKGRKGPGQPSSP GQPSSPQRLDRLSGLA K G P Q R L 0 1 0 0 0 2 0 2 0 0 0 0 0 0 3 2 0 0 0 0 0 0 10 0 1009.4941 O95400 O95400 189 198 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 2 0.025869 60.691 By MS/MS 1 1434200 1434200 0 2012 1488 2223 5016 4625 4625 2756;2757 1 GPGQVPTATSALSLELQEVEPLGLPQASPSR PADKLTPKGPGQVPTA LPQASPSRTRSPDVIS K G P S R T 3 1 0 0 0 3 3 3 0 0 5 0 0 0 5 4 2 0 0 2 0 0 31 0 3128.6354 Q6P2E9 Q6P2E9 696 726 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 3 6.1408E-05 65.058 By MS/MS By matching 1 1 20551000 17994000 2557300 2013 2153 2224 5017;5018 4626 4626 4290 1 GPGSPPRTPPAPGPPSFEEQLR LQLSTEPRGPGSPPRT PSFEEQLRLALELSSR R G P L R L 1 2 0 0 0 1 2 3 0 0 1 0 0 1 8 2 1 0 0 0 0 0 22 1 2270.1444 Q6ZTN6 Q6ZTN6 462 483 ANKRD13D Ankyrin repeat domain-containing protein 13D yes yes 3 0.0044593 52.427 By MS/MS 1 2450500 0 2450500 2014 2183 2225 5019 4627 4627 4357;6923 1 GPHHLDNSSPGPGSEAR GLSSLPPRGPHHLDNS PGPGSEARGINGGPSR R G P A R G 1 1 1 1 0 0 1 3 2 0 1 0 0 0 3 3 0 0 0 0 0 0 17 0 1713.7819 Q8WWM7;H3BUF6 Q8WWM7 383 399 ATXN2L Ataxin-2-like protein yes no 3 0.0013485 67.416 By MS/MS By matching 1 1 7668700 3218400 4450300 2015 2409 2226 5020;5021 4628 4628 4819;4820 1 GPKPEPPGSGSPAPPR SAPADSERGPKPEPPG SGSPAPPRRRRRAQDD R G P P R R 1 1 0 0 0 0 1 3 0 0 0 1 0 0 7 2 0 0 0 0 0 0 16 1 1526.7841 Q9UKJ3 Q9UKJ3 730 745 GPATCH8 G patch domain-containing protein 8 yes yes 2 0.0019812 75.018 By matching By MS/MS 1 1 9087000 4344300 4742700 2016 2831 2227 5022;5023 4629 4629 5828 1 GPLSPFNSR SSSWLNVKGPLSPFNS PLSPFNSRAAAGPAHH K G P S R A 0 1 1 0 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 0 0 9 0 973.49813 A1L390;A0A0U1RR71;G3V3I3;G3V278 A1L390 73 81 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.0069933 80.24 By MS/MS By MS/MS 1 1 6069200 3350000 2719200 2017 391 2228 5024;5025 4630;4631 4630 747 2 GPPASSPAPAPK SLANTQPRGPPASSPA SSPAPAPKFSPVTPKF R G P P K F 3 0 0 0 0 0 0 1 0 0 0 1 0 0 5 2 0 0 0 0 0 0 12 0 1075.5662 H0Y2Y8;Q15942;H7C3D3 H0Y2Y8 222 233 ZYX Zyxin yes no 2 0.001083 101.39 By MS/MS By MS/MS 1 1 11309000 6242300 5066900 2018 1007 2229 5026;5027 4632;4633;4634 4633 1854 3 GPPASSPAPAPKFSPVTPK SLANTQPRGPPASSPA KFSPVTPKFTPVASKF R G P P K F 3 0 0 0 0 0 0 1 0 0 0 2 0 1 7 3 1 0 0 1 0 0 19 1 1831.9832 H0Y2Y8;Q15942;H7C3D3 H0Y2Y8 222 240 ZYX Zyxin yes no 3 1.9114E-06 88.036 By matching By MS/MS 1 1 5416600 3201000 2215600 2019 1007 2230 5028;5029 4635 4635 1853;1854 1 GPPDFSSDEEREPTPVLGSGAAAAGR LPAGTNSKGPPDFSSD SGAAAAGRSRAAVGRK K G P G R S 4 2 0 2 0 0 3 4 0 0 1 0 0 1 4 3 1 0 0 1 0 0 26 1 2569.2045 P42166;G5E972;P42167 G5E972 61 86 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 3;4 6.9846E-27 116.35 By MS/MS By MS/MS 6 6 528640000 308610000 220030000 2020 990;1695 2231;2232;2233 5030;5031;5032;5033;5034;5035;5036;5037;5038;5039;5040;5041 4636;4637;4638;4639;4640;4641;4642;4643;4644;4645;4646;4647;4648;4649;4650;4651;4652;4653;4654;4655;4656;4657;4658;4659 4654 1808;1809;1810;6499 24 GPPQSPVFEGVYNNSR ARGQSTGKGPPQSPVF EGVYNNSRMLHFLTAV K G P S R M 0 1 2 0 0 1 1 2 0 0 0 0 0 1 3 2 0 0 1 2 0 0 16 0 1746.8325 Q8WWM7;H3BUF6;H3BSK9 Q8WWM7 107 122 ATXN2L Ataxin-2-like protein yes no 3 0.00027826 82.406 By MS/MS By MS/MS 1 1 7042100 4247800 2794300 2021 2409 2234 5042;5043 4660;4661 4660 4821 2 GPPSPPAPVMHSPSR KINKKIPRGPPSPPAP PVMHSPSRKMTVKEQQ R G P S R K 1 1 0 0 0 0 0 1 1 0 0 0 1 0 6 3 0 0 0 1 0 0 15 0 1512.7507 G3V4X8;G3V3A4;Q13573 G3V4X8 59 73 SNW1 SNW domain-containing protein 1 yes no 2;3 1.0074E-20 143.99 By MS/MS By MS/MS 6 5 127450000 71298000 56149000 2022 967 2235;2236;2237 5044;5045;5046;5047;5048;5049;5050;5051;5052;5053;5054 4662;4663;4664;4665;4666;4667;4668;4669;4670;4671;4672;4673;4674;4675;4676;4677;4678;4679;4680;4681;4682 4681 111 1760;1761;1762 21 GPPSPPAPVMHSPSRK KINKKIPRGPPSPPAP VMHSPSRKMTVKEQQE R G P R K M 1 1 0 0 0 0 0 1 1 0 0 1 1 0 6 3 0 0 0 1 0 0 16 1 1640.8457 G3V4X8;G3V3A4;Q13573 G3V4X8 59 74 SNW1 SNW domain-containing protein 1 yes no 2;3 1.3292E-15 132.67 By MS/MS By MS/MS 3 3 173230000 96855000 76374000 2023 967 2238;2239 5055;5056;5057;5058;5059;5060 4683;4684;4685;4686;4687;4688;4689;4690;4691;4692;4693;4694;4695;4696;4697 4689 111 1760;1761;1762 15 GPQPPTVSPIR QKQNDTPKGPQPPTVS PPTVSPIRSSRPPPAK K G P I R S 0 1 0 0 0 1 0 1 0 1 0 0 0 0 4 1 1 0 0 1 0 0 11 0 1147.635 P46087 P46087 779 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0.00014356 113.95 By MS/MS By MS/MS 1 1 123400000 59575000 63829000 2024 1707 2240 5061;5062 4698;4699;4700 4699 3155 3 GPRTPSPPPPIPEDIALGKK KTNQSKKKGPRTPSPP EDIALGKKYKEKYKVK K G P K K Y 1 1 0 1 0 0 1 2 0 2 1 2 0 0 7 1 1 0 0 0 0 0 20 2 2066.1524 Q5T200 Q5T200 260 279 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 0.026973 50.178 By MS/MS 1 0 0 0 2025 2094 2241 5063 4701 4701 1 GPSFMTSPSPK SKSQVKKRGPSFMTSP FMTSPSPKHLKTDDST R G P P K H 0 0 0 0 0 0 0 1 0 0 0 1 1 1 3 3 1 0 0 0 0 0 11 0 1134.5379 E7ESG2;Q9HAW4 E7ESG2 1255 1265 CLSPN Claspin yes no 2 0.00012476 114.87 By MS/MS By MS/MS 1 1 4434600 2357600 2077000 2026 731 2242 5064;5065 4702;4703 4702 1307 2 GPSHPLDLGTSSPNTSQIHWTPYR GPALSHSRGPSHPLDL QIHWTPYRAMYQYRPQ R G P Y R A 0 1 1 1 0 1 0 2 2 1 2 0 0 0 4 4 3 1 1 0 0 0 24 0 2647.2779 H0YAZ3;O60504 H0YAZ3 107 130 SORBS3 Vinexin yes no 3 0.013936 44.5 By MS/MS By matching 1 1 16982000 9476500 7505200 2027 1052 2243 5066;5067 4704;4705 4704 1954;1955 2 GPSPAPASSPKR RLDKSDPRGPSPAPAS APASSPKREVLYDSEG R G P K R E 2 1 0 0 0 0 0 1 0 0 0 1 0 0 4 3 0 0 0 0 0 0 12 1 1150.6095 Q9H7N4 Q9H7N4 717 728 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.0083654 79.489 By MS/MS 1 1737400 1737400 0 2028 2675 2244 5068 4706;4707 4706 5458;5459 2 GPSPAPASSPKREVLYDSEGLSGEER RLDKSDPRGPSPAPAS EGLSGEERGGKSSQKD R G P E R G 2 2 0 1 0 0 4 3 0 0 2 1 0 0 4 5 0 0 1 1 0 0 26 2 2714.3148 Q9H7N4 Q9H7N4 717 742 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 3 0.014886 42.325 By matching By MS/MS 1 1 10776000 6145000 4630600 2029 2675 2245 5069;5070 4708 4708 5454;5455;5458;5459;7893 1 GPSPSPVGSPASVAQSR SPHLPGIRGPSPSPVG PASVAQSRSGPLSPAA R G P S R S 2 1 0 0 0 1 0 2 0 0 0 0 0 0 4 5 0 0 0 2 0 0 17 0 1579.7954 O14497;H0Y488;A0A1B0GTU5;A0A087WUV6 O14497 694 710 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 8.1459E-05 84.508 By MS/MS By MS/MS 1 1 7329200 4179400 3149900 2030 1339 2246 5071;5072 4709;4710 4709 2417 2 GPSPSSPTPPAAAAPAEQAPR LPGPGAARGPSPSSPT APAEQAPRAKGRPRRS R G P P R A 6 1 0 0 0 1 1 1 0 0 0 0 0 0 7 3 1 0 0 0 0 0 21 0 1955.9701 Q86VQ1 Q86VQ1 103 123 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 3 0.012951 46.702 By MS/MS By MS/MS 1 1 6315900 3076400 3239500 2031 2244 2247 5073;5074 4711;4712 4712 4487 2 GPSSVEDIK EKTPKTPKGPSSVEDI PSSVEDIKAKMQASIE K G P I K A 0 0 0 1 0 0 1 1 0 1 0 1 0 0 1 2 0 0 0 1 0 0 9 0 930.46583 P06748 P06748 240 248 NPM1 Nucleophosmin yes yes 2 0.014572 69.598 By MS/MS By MS/MS 2 2 22773000 12124000 10649000 2032 1533 2248;2249 5075;5076;5077;5078 4713;4714 4713 2819 2 GPSTPKSPGASNFSTLPK NEDGTWPRGPSTPKSP SNFSTLPKISPSSLSN R G P P K I 1 0 1 0 0 0 0 2 0 0 1 2 0 1 4 4 2 0 0 0 0 0 18 1 1771.9105 Q9Y4E8 Q9Y4E8 223 240 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2;3 3.7793E-09 112.12 By MS/MS By MS/MS 2 2 30184000 16482000 13702000 2033 2919 2250 5079;5080;5081;5082 4715;4716;4717;4718 4715 6071;6072 4 GPTSTSIDNIDGTPVRDER SHPSDFQRGPTSTSID GTPVRDERSGTPTQDE R G P E R S 0 2 1 3 0 0 1 2 0 2 0 0 0 0 2 2 3 0 0 1 0 0 19 1 2028.9712 Q5VT52 Q5VT52 711 729 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.00039956 74.338 By MS/MS By matching 1 1 48769000 25451000 23318000 2034 2115 2251 5083;5084 4719 4719 6889 1 GPTTGEGALDLSDVHSPPKSPEGK RRCQQKEKGPTTGEGA PPKSPEGKTSAQTTPS K G P G K T 1 0 0 2 0 0 2 4 1 0 2 2 0 0 4 3 2 0 0 1 0 0 24 1 2375.1605 O95684 O95684 141 164 FGFR1OP FGFR1 oncogene partner yes yes 3 0.013486 45.22 By MS/MS 1 6266400 0 6266400 2035 1496 2252 5085 4720 4720 2772;2773 1 GPVSGSPDSMNASR KIACSKVRGPVSGSPD PDSMNASRLSQPGQLM R G P S R L 1 1 1 1 0 0 0 2 0 0 0 0 1 0 2 4 0 0 0 1 0 0 14 0 1360.6041 O14920 O14920 667 680 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes yes 2 0.0012502 87.566 By MS/MS By MS/MS 1 1 8892200 5168200 3724000 2036 1348 2253 5086;5087 4721;4722 4722 2455;2456 2 GPVSGTEPEPVYSMEAADYR FKAELSYRGPVSGTEP SMEAADYREASSQQGL R G P Y R E 2 1 0 1 0 0 3 2 0 0 0 0 1 0 3 2 1 0 2 2 0 0 20 0 2153.9575 Q14247;H0YEV2;H0YCD9 Q14247 435 454 CTTN Src substrate cortactin yes no 2;3 5.3007E-50 162.37 By MS/MS By MS/MS 9 8 186530000 98801000 87731000 2037 1945 2254;2255;2256;2257 5088;5089;5090;5091;5092;5093;5094;5095;5096;5097;5098;5099;5100;5101;5102;5103;5104 4723;4724;4725;4726;4727;4728;4729;4730;4731;4732;4733;4734;4735;4736;4737;4738;4739;4740;4741;4742;4743;4744;4745;4746 4731 261 3751;7698;7699 23 GPVSPSVSFQPLAR TSSLTPSRGPVSPSVS VSFQPLARSTPRASRL R G P A R S 1 1 0 0 0 1 0 1 0 0 1 0 0 1 3 3 0 0 0 2 0 0 14 0 1440.7725 Q7Z434 Q7Z434 219 232 MAVS Mitochondrial antiviral-signaling protein yes yes 2 2.1591E-07 121.18 By MS/MS By MS/MS 1 1 19195000 12083000 7111900 2038 2216 2258 5105;5106 4747;4748 4748 4420 2 GQAGLPGGLVSPGSGDR EELKATTRGQAGLPGG VSPGSGDRAQRLGHSL R G Q D R A 1 1 0 1 0 1 0 6 0 0 2 0 0 0 2 2 0 0 0 1 0 0 17 0 1523.7692 Q9P266 Q9P266 1294 1310 KIAA1462 Junctional protein associated with coronary artery disease yes yes 2 0.019956 51.888 By MS/MS By matching 1 1 6280400 3983400 2297100 2039 2784 2259 5107;5108 4749 4749 5716 1 GQESSSDQEQVDVESIDFSK DLDAMDIKGQESSSDQ VESIDFSKENKMDMTS K G Q S K E 0 0 0 3 0 3 3 1 0 1 0 1 0 1 0 5 0 0 0 2 0 0 20 0 2212.9608 Q96JM3 Q96JM3 648 667 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0035313 65.704 By MS/MS 1 0 0 0 2040 2509 2260 5109 4750 4750 5049;5050;5051 1 GQGESDPLDHEPAVSPLLPR VPEMPHSKGQGESDPL AVSPLLPRKERGPPEG K G Q P R K 1 1 0 2 0 1 2 2 1 0 3 0 0 0 4 2 0 0 0 1 0 0 20 0 2113.044 P00519 P00519 555 574 ABL1 Tyrosine-protein kinase ABL1 yes yes 3 0.0023883 60.093 By MS/MS By MS/MS 1 1 6653200 3488100 3165100 2041 1512 2261 5110;5111 4751;4752 4751 2797 2 GQGPRSPHKVGR ________________ RSPHKVGRRFPAGGKR M G Q G R R 0 2 0 0 0 1 0 3 1 0 0 1 0 0 2 1 0 0 0 1 0 0 12 2 1274.6956 Q86U38 Q86U38 2 13 NOP9 Nucleolar protein 9 yes yes 3 0.011337 63.473 By matching By MS/MS 1 1 12407000 2986400 9420300 2042 2232 2262 5112;5113 4753 4753 4472 1 GQGTSTCSTAGSNSSR SRPSFLSRGQGTSTCS TAGSNSSRGSSSSRGS R G Q S R G 1 1 1 0 1 1 0 3 0 0 0 0 0 0 0 5 3 0 0 0 0 0 16 0 1556.6485 F5GWJ5;Q96MS0;F5H0K7 F5GWJ5 1313 1328 ROBO3 Roundabout homolog 3 yes no 2 0.025655 48.004 By MS/MS By MS/MS 1 1 0 0 0 2043 858 2263 5114;5115 4754;4755 4755 2 GQKSPGALETPSAAGSQGNTASQGK DSGASAAKGQKSPGAL GNTASQGKEGPYSEPS K G Q G K E 4 0 1 0 0 3 1 5 0 0 1 2 0 0 2 4 2 0 0 0 0 0 25 1 2328.1306 C9JVY5;Q9Y2D5 C9JVY5 439 463 AKAP2 A-kinase anchor protein 2 yes no 3 0.00041191 58.998 By MS/MS By matching 1 1 13299000 6489700 6809300 2044 611 2264 5116;5117 4756 4756 1117 1 GQLERSPSGSAFGSQENLR QEMVRRSRGQLERSPS FGSQENLRWRKDMTHW R G Q L R W 1 2 1 0 0 2 2 3 0 0 2 0 0 1 1 4 0 0 0 0 0 0 19 1 2018.977 A0A1B0GWE0 A0A1B0GWE0 516 534 yes yes 3 1.2258E-09 112.91 By MS/MS By MS/MS 1 1 14962000 7602800 7359500 2045 381 2265 5118;5119 4757;4758 4758 724;725;726 1 GQLTNIVSPTAATTPR LPMSLSAKGQLTNIVS PTAATTPRITRSNSIP K G Q P R I 2 1 1 0 0 1 0 1 0 1 1 0 0 0 2 1 4 0 0 1 0 0 16 0 1625.8737 Q8NEY1;H0Y6F6 Q8NEY1 993 1008 NAV1 Neuron navigator 1 yes no 2 4.5512E-06 111.7 By MS/MS By MS/MS 1 1 9860200 5527100 4333100 2046 2350 2266 5120;5121 4759;4760;4761 4760 4712 3 GQSPAGDGSPEPPTPR NVRSAWYRGQSPAGDG SPEPPTPRYNTWVLQD R G Q P R Y 1 1 0 1 0 1 1 3 0 0 0 0 0 0 5 2 1 0 0 0 0 0 16 0 1548.7168 A0A0A0MRW6;Q9H6R4 A0A0A0MRW6 281 296 NOL6 Nucleolar protein 6 yes no 2 0.0032961 66.989 By MS/MS By matching 1 1 4638900 2070600 2568200 2047 202 2267 5122;5123 4762 4762 368 1 GQSQLSNPTDDSWK IDKNPSERGQSQLSNP NPTDDSWKGRPYANQK R G Q W K G 0 0 1 2 0 2 0 1 0 0 1 1 0 0 1 3 1 1 0 0 0 0 14 0 1561.7009 Q9Y6D5 Q9Y6D5 1523 1536 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 7.9347E-05 113.52 By MS/MS By MS/MS 1 1 14919000 7314600 7604300 2048 2945 2268 5124;5125 4763;4764 4764 6119 2 GQSTGKGPPQSPVFEGVYNNSR AAAIGSARGQSTGKGP EGVYNNSRMLHFLTAV R G Q S R M 0 1 2 0 0 2 1 4 0 0 0 1 0 1 3 3 1 0 1 2 0 0 22 1 2305.1087 Q8WWM7;H3BUF6 Q8WWM7 101 122 ATXN2L Ataxin-2-like protein yes no 3 8.4495E-12 102.9 By MS/MS By MS/MS 1 1 25911000 13384000 12526000 2049 2409 2269 5126;5127 4765;4766;4767;4768 4768 4821 3 GQTPLTEGSEDLDGHSDPEESFAR NGTFNLSRGQTPLTEG DPEESFARDLPDFPSI R G Q A R D 1 1 0 3 0 1 4 3 1 0 2 0 0 1 2 3 2 0 0 0 0 0 24 0 2573.1154 Q86VR2;K7EQI9 Q86VR2 305 328 FAM134C Protein FAM134C yes no 3 0.00093432 57.826 By MS/MS By MS/MS 1 1 34300000 18693000 15607000 2050 2245 2270 5128;5129 4769;4770 4770 4491;4492 2 GQYLNLDKDHNGMLSKEELSR ________________ LSKEELSRYGTATMTN - G Q S R Y 0 1 2 2 0 1 2 2 1 0 4 2 1 0 0 2 0 0 1 0 0 0 21 2 2446.1911 H0YJV0 H0YJV0 1 21 PPP2R3C yes yes 4 0.0096354 43.383 By MS/MS By matching 1 1 18135000 8372800 9762000 2051 1083 2271 5130;5131 4771 4771 2000 1 GRAEGEWEDQEALDYFSDKESGK SKEKGSEKGRAEGEWE FSDKESGKQKFNDSEG K G R G K Q 2 1 0 3 0 1 5 3 0 0 1 2 0 1 0 2 0 1 1 0 0 0 23 2 2645.1518 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 369 391 BCLAF1 Bcl-2-associated transcription factor 1 yes no 4 7.5011E-14 99.641 By MS/MS By MS/MS 1 1 16271000 9095500 7175700 2052 2759 2272 5132;5133 4772;4773 4772 5642;5643 2 GRASSHSSQTQGGGSVTK SPTSQRSRGRASSHSS QGGGSVTKKRKLESTE R G R T K K 1 1 0 0 0 2 0 4 1 0 0 1 0 0 0 5 2 0 0 1 0 0 18 1 1730.8296 Q3BDU5;P02545;A0A0C4DGC5;Q5TCI8 Q3BDU5 400 417 LMNA Prelamin-A/C;Lamin-A/C yes no 3 5.8277E-06 85.176 By matching By MS/MS 1 1 14288000 5252100 9036400 2053 1517 2273 5134;5135 4774 4774 2799;2800;2801;2802 1 GRDSPYQSR SRSRSGSRGRDSPYQS RDSPYQSRGSPHYFSP R G R S R G 0 2 0 1 0 1 0 1 0 0 0 0 0 0 1 2 0 0 1 0 0 0 9 1 1064.4999 Q13242 Q13242 201 209 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 2;3 0.0088835 80.871 By MS/MS By MS/MS 1 2 14102000 6634200 7468000 2054 1906 2274 5136;5137;5138 4775;4776;4777 4775 3644 3 GRDYCSEEEDIT MLDEKIEKGRDYCSEE CSEEEDIT________ K G R I T - 0 1 0 2 1 0 3 1 0 1 0 0 0 0 0 1 1 0 1 0 0 0 12 1 1472.5726 Q9H246 Q9H246 110 121 C1orf21 Uncharacterized protein C1orf21 yes yes 2 0.0040781 84.173 By MS/MS By MS/MS 1 1 30730000 15960000 14770000 2055 2641 2275 5139;5140 4778;4779 4779 5382 2 GREDVSNFDDEFTSEAPILTPPREPR PPFIPTIRGREDVSNF LTPPREPRILSEEEQE R G R P R I 1 3 1 3 0 0 4 1 0 1 1 0 0 2 4 2 2 0 0 1 0 0 26 2 2973.4104 Q16513 Q16513 939 964 PKN2 Serine/threonine-protein kinase N2 yes yes 4 0.00012495 63.272 By MS/MS By MS/MS 1 2 48425000 17580000 30845000 2056 2016 2276 5141;5142;5143 4780;4781 4781 6841 2 GREVSPSDVR IKHVRRVRGREVSPSD EVSPSDVREDSNLESS R G R V R E 0 2 0 1 0 0 1 1 0 0 0 0 0 0 1 2 0 0 0 2 0 0 10 1 1100.5574 Q8WYP5 Q8WYP5 1940 1949 AHCTF1 Protein ELYS yes yes 2 0.0068599 77.124 By matching By MS/MS 1 1 10813000 5032700 5780000 2057 2417 2277 5144;5145 4782 4782 4851 1 GRFTISTDNSKNTLYLQMNSLR TNYADSVKGRFTISTD YLQMNSLRVEDTAVYY K G R L R V 0 2 3 1 0 1 0 1 0 1 3 1 1 1 0 3 3 0 1 0 0 0 22 2 2558.2911 A0A075B7B8 A0A075B7B8 85 106 IGHV3OR16-12 yes yes 3 0.016661 40.384 By MS/MS 1 3275700 3275700 0 2058 16 2278 5146 4783 4783 34;35;7154 1 GRLGSVDSFER SRGANRMRGRLGSVDS GSVDSFERSNSLASEK R G R E R S 0 2 0 1 0 0 1 2 0 0 1 0 0 1 0 2 0 0 0 1 0 0 11 1 1221.6102 O60343;Q5JU47 O60343 584 594 TBC1D4 TBC1 domain family member 4 yes no 2;3 0.0028219 91.712 By MS/MS By MS/MS 2 2 102700000 54178000 48521000 2059 1407 2279 5147;5148;5149;5150 4784;4785;4786;4787 4786 2589;2590 4 GRLSPVPVPR YDRLFDYRGRLSPVPV LSPVPVPRAVPVKRPR R G R P R A 0 2 0 0 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 1 1076.6455 Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9 132 141 RALY RNA-binding protein Raly yes no 2;3 0.0028851 90.614 By MS/MS By MS/MS 2 2 162130000 93867000 68265000 2060 2833 2280 5151;5152;5153;5154 4788;4789;4790;4791 4790 5832 4 GRLTPSPDIIVLSDNEASSPR ARRSEPERGRLTPSPD DNEASSPRSSSRMEER R G R P R S 1 2 1 2 0 0 1 1 0 2 2 0 0 0 3 4 1 0 0 1 0 0 21 1 2223.1495 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 117 137 GATAD2B Transcriptional repressor p66-beta yes no 3 1.9809E-08 89.756 By MS/MS By MS/MS 7 8 149240000 79966000 69271000 2061 352 2281;2282;2283;2284 5155;5156;5157;5158;5159;5160;5161;5162;5163;5164;5165;5166;5167;5168;5169 4792;4793;4794;4795;4796;4797;4798;4799;4800;4801;4802;4803;4804;4805 4792 649;650;651;652;6314 14 GRNSATSADEQPHIGNYR ________________ QPHIGNYRLLKTIGKG R G R Y R L 2 2 2 1 0 1 1 2 1 1 0 0 0 0 1 2 1 0 1 0 0 0 18 1 1971.9147 E7ETY4;E9PC69;Q7KZI7;F5H4J8;F5H6N2;F5H4F6 E7ETY4 4 21 MARK2 Serine/threonine-protein kinase MARK2 yes no 3 0.0076852 54.828 By MS/MS By MS/MS 1 1 54169000 30358000 23812000 2062 738 2285 5170;5171 4806;4807 4806 6427 2 GRPPAEKLSPNPPNLTK ESKKQKKRGRPPAEKL PNPPNLTKKMKKIVDA R G R T K K 1 1 2 0 0 0 1 1 0 0 2 2 0 0 5 1 1 0 0 0 0 0 17 2 1815.0003 Q9HBD4;A0A0A0MT49;P51532 Q9HBD4 1476 1492 SMARCA4 Transcription activator BRG1 yes no 3 2.7473E-05 87.363 By MS/MS By MS/MS 1 1 17209000 9928000 7281500 2063 237 2286 5172;5173 4808;4809;4810;4811 4809 426 4 GRRSPILLPK GRTSPEARGRRSPILL RSPILLPKGLLAPEAG R G R P K G 0 2 0 0 0 0 0 1 0 1 2 1 0 0 2 1 0 0 0 0 0 0 10 2 1135.719 Q8TD16 Q8TD16 579 588 BICD2 Protein bicaudal D homolog 2 yes yes 3 0.0027032 82.029 By MS/MS 1 5917900 5917900 0 2064 2378 2287 5174 4812 4812 4760 1 GRSPSQYHDFAEKLK VGGREGMRGRSPSQYH HDFAEKLKMSPGRSRG R G R L K M 1 1 0 1 0 1 1 1 1 0 1 2 0 1 1 2 0 0 1 0 0 0 15 2 1761.8798 Q9UGU0 Q9UGU0 1003 1017 TCF20 Transcription factor 20 yes yes 3 0.027655 43.813 By matching By MS/MS 1 1 2659500 1541400 1118100 2065 2810 2288 5175;5176 4813 4813 7929 0 GRSSESSCGVDGDYEDAELNPR DASRPPYRGRSSESSC EDAELNPRFLKDNLID R G R P R F 1 2 1 3 1 0 3 3 0 0 1 0 0 0 1 4 0 0 1 1 0 0 22 1 2398.9932 P11274;A9UF01 P11274 233 254 BCR;BCR/ABL fusion Breakpoint cluster region protein yes no 3 0.014478 55.744 By MS/MS 1 0 0 0 2066 1562 2289 5177 4814 4814 2864;7561 1 GRSYDSSMESR SDYEHSRRGRSYDSSM YDSSMESRNRDREKRR R G R S R N 0 2 0 1 0 0 1 1 0 0 0 0 1 0 0 4 0 0 1 0 0 0 11 1 1273.5357 Q9HCG8;B7WP74 Q9HCG8 59 69 CWC22 Pre-mRNA-splicing factor CWC22 homolog yes no 2 0.016097 64.945 By MS/MS By MS/MS 1 2 9599700 4088700 5511100 2067 2693 2290 5178;5179;5180 4815;4816 4815 5495 1 GRTLEEVVMAEEEDEGTDRPGSPA VLVESKLRGRTLEEVV TDRPGSPA________ R G R P A - 2 2 0 2 0 0 6 3 0 0 1 0 1 0 2 1 2 0 0 2 0 0 24 2 2573.1551 F8WC89;A6NKF1 F8WC89 335 358 SAC3D1 SAC3 domain-containing protein 1 yes no 3 3.744E-06 81.312 By MS/MS By MS/MS 1 1 16648000 8580400 8067500 2068 421 2291 5181;5182 4817;4818 4818 792 2 GSALGTPAAAEPVTPTSK PHKEEAGKGSALGTPA EPVTPTSKAGSGAPGG K G S S K A 4 0 0 0 0 0 1 2 0 0 1 1 0 0 3 2 3 0 0 1 0 0 18 0 1653.8574 P00519 P00519 839 856 ABL1 Tyrosine-protein kinase ABL1 yes yes 2 0.0019703 75.97 By MS/MS By MS/MS 1 1 8875800 5900200 2975700 2069 1512 2292 5183;5184 4819;4820 4820 6652 2 GSAPHSESDLPEQEEEILGSDDDEQEDPNDYCKGGYHLVK LRSETQHRGSAPHSES KGGYHLVKIGDLFNGR R G S V K I 1 0 1 6 1 2 7 4 2 1 3 2 0 0 3 4 0 0 2 1 0 0 40 1 4487.9096 D6RBM8;H3BLV9;Q96SB4 D6RBM8 48 87 SRPK1 SRSF protein kinase 1 yes no 4 1.7816E-08 65.883 By MS/MS By matching 1 1 171300000 95541000 75757000 2070 660 2293 5185;5186 4821 4821 1189 1 GSCNLSRVDSTTCLFPVEEK GERGKDKKGSCNLSRV CLFPVEEKAVEYYFAS K G S E K A 0 1 1 1 2 0 2 1 0 0 2 1 0 1 1 3 2 0 0 2 0 0 20 1 2298.062 Q06210 Q06210 252 271 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 3 1.4326E-05 81.639 By MS/MS By MS/MS 1 1 25228000 11319000 13909000 2071 1857 2294 5187;5188 4822;4823 4822 3497;6771 2 GSDDAPYSPTAR KSRSKKRKGSDDAPYS APYSPTARVGPSVPRQ K G S A R V 2 1 0 2 0 0 0 1 0 0 0 0 0 0 2 2 1 0 1 0 0 0 12 0 1235.5418 O75151;E7ET14;A0A087WW48 O75151 898 909 PHF2 Lysine-specific demethylase PHF2 yes no 2 2.8012E-09 144.51 By matching By MS/MS 1 1 13736000 8035100 5700900 2072 1430 2295 5189;5190 4824 4824 2635;2636 1 GSDDELFLGGSNQDSVQGLGR PQELPQAKGSDDELFL DSVQGLGRAVCPAGGE K G S G R A 0 1 1 3 0 2 1 5 0 0 3 0 0 1 0 3 0 0 0 1 0 0 21 0 2149.9876 Q96JB3 Q96JB3 196 216 HIC2 Hypermethylated in cancer 2 protein yes yes 2 4.8482E-05 77.08 By MS/MS By MS/MS 1 1 11948000 6393600 5554400 2073 2505 2296 5191;5192 4825;4826 4825 5041 2 GSDNSSYDEALSPTSPGPLSVR RGQEDSSRGSDNSSYD SPGPLSVRAGHGERDL R G S V R A 1 1 1 2 0 0 1 2 0 0 2 0 0 0 3 6 1 0 1 1 0 0 22 0 2235.0291 J3KQH6;P78364 J3KQH6 839 860 PHC1 Polyhomeotic-like protein 1 yes no 2 0.0032567 63.037 By MS/MS By matching 1 1 4405200 2316400 2088800 2074 1234 2297 5193;5194 4827 4827 2236;6563 1 GSEGYLAATYPTVGQTSPR TQPWSSPKGSEGYLAA TVGQTSPRARKSMSLD K G S P R A 2 1 0 0 0 1 1 3 0 0 1 0 0 0 2 2 3 0 2 1 0 0 19 0 1953.9432 J3QSG6;H0Y465;P21359 J3QSG6 294 312 NF1 Neurofibromin;Neurofibromin truncated yes no 3 0.0018031 69.148 By MS/MS 1 0 0 0 2075 1016 2298 5195 4828 4828 1876 1 GSEKEEYFI QMESDLAKGSEKEEYF SEKEEYFI________ K G S F I - 0 0 0 0 0 0 3 1 0 1 0 1 0 1 0 1 0 0 1 0 0 0 9 1 1100.5026 S4R466;Q0VAQ4 S4R466 75 83 SMAGP Small cell adhesion glycoprotein yes no 2 0.0093485 72.789 By matching By MS/MS 1 1 11211000 5880000 5330900 2076 1873 2299 5196;5197 4829 4829 7675 1 GSESPEMGPEVTPAPR PLPGLDLKGSESPEMG PEVTPAPRDELVEAAC K G S P R D 1 1 0 0 0 0 3 2 0 0 0 0 1 0 4 2 1 0 0 1 0 0 16 0 1639.7512 A0A0A0MSQ2;H0Y4B4;F8W689;P48382 A0A0A0MSQ2 182 197 RFX5 DNA-binding protein RFX5 yes no 2 0.0020871 71.781 By MS/MS By MS/MS 1 1 5503600 3080300 2423300 2077 222 2300 5198;5199 4830;4831 4830 404;405 2 GSESPNSFLDQESR KQPLPGPKGSESPNSF SFLDQESRRRRFTIAD K G S S R R 0 1 1 1 0 1 2 1 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1551.6801 Q5T4Y8;C9IZX4;Q6P9H4 Q5T4Y8 142 155 CNKSR3 Connector enhancer of kinase suppressor of ras 3 yes no 2 0.0037559 72.265 By MS/MS By MS/MS 1 1 9762900 5815500 3947500 2078 545 2301 5200;5201 4832;4833;4834 4834 995;996 3 GSFSDTGLGDGKMK DKEKIKEKGSFSDTGL GLGDGKMKSDSFAPKT K G S M K S 0 0 0 2 0 0 0 4 0 0 1 2 1 1 0 2 1 0 0 0 0 0 14 1 1398.6449 Q9Y2W1 Q9Y2W1 376 389 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0042839 74.789 By matching By MS/MS 1 1 11276000 5759600 5516700 2079 2897 2302 5202;5203 4835 4835 6034 1 GSFSSENYWR LLPTHRRRGSFSSENY FSSENYWRKSYESSED R G S W R K 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 3 0 1 1 0 0 0 10 0 1231.5258 K7ER58;Q6P6C2 K7ER58 19 28 ALKBH5 RNA demethylase ALKBH5 yes no 2 0.0053655 76.655 By MS/MS By MS/MS 1 1 8116800 4871500 3245200 2080 1287 2303 5204;5205 4836;4837 4837 2319 2 GSGIFDESTPVQTR RTNPPGGKGSGIFDES ESTPVQTRQHLNPPGG K G S T R Q 0 1 0 1 0 1 1 2 0 1 0 0 0 1 1 2 2 0 0 1 0 0 14 0 1492.7158 H3BMT0;H3BTV5;H3BU16;A6NGP5;H3BMV3;Q9H910 H3BMT0 52 65 HN1L Hematological and neurological expressed 1-like protein yes no 2 0.020084 68.283 By MS/MS By MS/MS 1 1 15917000 10504000 5412800 2081 413 2304 5206;5207 4838;4839 4838 2 GSGLGSPTSSFNSTVFGPSSLNSLR SSFPYTTKGSGLGSPT PSSLNSLRQSPMQTIQ K G S L R Q 0 1 2 0 0 0 0 4 0 0 3 0 0 2 2 8 2 0 0 1 0 0 25 0 2455.1979 O43524 O43524 420 444 FOXO3 Forkhead box protein O3 yes yes 2 3.5529E-05 74.786 By matching By MS/MS 1 1 33889000 21633000 12257000 2082 1389 2305 5208;5209 4840 4840 2546 1 GSGSPTHSLSQK RRKRGAQKGSGSPTHS PTHSLSQKSTRLSGAA K G S Q K S 0 0 0 0 0 1 0 2 1 0 1 1 0 0 1 4 1 0 0 0 0 0 12 0 1184.5786 I3L2R2;I3L419;I3L156;Q9BSJ6 I3L2R2 20 31 FAM64A Protein FAM64A yes no 2 0.0010839 101.38 By matching By MS/MS 1 1 8930000 3326400 5603600 2083 1198 2306 5210;5211 4841 4841 2179 1 GSGTASDDEFENLR RIALPAPRGSGTASDD DDEFENLRIKGPNAVQ R G S L R I 1 1 1 2 0 0 2 2 0 0 1 0 0 1 0 2 1 0 0 0 0 0 14 0 1496.6379 Q7Z6Z7 Q7Z6Z7 1902 1915 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 6.75E-05 114.56 By MS/MS By MS/MS 1 1 601700000 300800000 300900000 2084 2226 2307 5212;5213 4842;4843 4843 4459;4460 2 GSHQISLDNPDYQQDFFPK SPAHWAQKGSHQISLD YQQDFFPKEAKPNGIF K G S P K E 0 0 1 3 0 3 0 1 1 1 1 1 0 2 2 2 0 0 1 0 0 0 19 0 2235.0233 E9PFD7;P00533 E9PFD7 1116 1134 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor yes no 3 0.00061484 69.935 By MS/MS By MS/MS 1 1 5767600 3303500 2464100 2085 778 2308 5214;5215 4844;4845 4844 7380 2 GSISSTSEVHSPPNVGLR SNTSRLSRGSISSTSE SPPNVGLRRSGQIEGV R G S L R R 0 1 1 0 0 0 1 2 1 1 1 0 0 0 2 5 1 0 0 2 0 0 18 0 1822.9173 Q8WWQ0 Q8WWQ0 673 690 PHIP PH-interacting protein yes yes 3 0.0012535 67.396 By MS/MS By MS/MS 1 1 7947000 3680700 4266300 2086 2410 2309 5216;5217 4846;4847 4846 4833 2 GSISTPNSPVK MRVSVSSKGSISTPNS STPNSPVKMTLIPSPN K G S V K M 0 0 1 0 0 0 0 1 0 1 0 1 0 0 2 3 1 0 0 1 0 0 11 0 1085.5717 Q96AY4;A0A087WW06 Q96AY4 2101 2111 TTC28 Tetratricopeptide repeat protein 28 yes no 2 0.0016271 90.689 By MS/MS By MS/MS 1 1 7427400 3745500 3681800 2087 2459 2310 5218;5219 4848;4849 4848 4952;4953 2 GSKPSPLSVK VESPKEGKGSKPSPLS KPSPLSVKNTKRRLEG K G S V K N 0 0 0 0 0 0 0 1 0 0 1 2 0 0 2 3 0 0 0 1 0 0 10 1 998.57605 Q96S94;A0A0A0MSF3 Q96S94 344 353 CCNL2 Cyclin-L2 yes no 2 3.7844E-05 123.26 By MS/MS By MS/MS 1 1 27809000 13491000 14318000 2088 2540 2311 5220;5221 4850;4851 4850 5122 2 GSLAEAVGSPPPAATPTPTPPTR AFDMSGVRGSLAEAVG PTPTPPTRKTPESFLG R G S T R K 4 1 0 0 0 0 1 2 0 0 1 0 0 0 7 2 4 0 0 1 0 0 23 0 2171.1222 Q9Y6I3 Q9Y6I3 446 468 EPN1 Epsin-1 yes yes 2;3 2.12E-15 105.82 By MS/MS By MS/MS 2 2 26474000 13813000 12661000 2089 2948 2312 5222;5223;5224;5225 4852;4853;4854;4855;4856 4855 6128 4 GSLASLDSLR APLAQHERGSLASLDS LASLDSLRKGGPPPPN R G S L R K 1 1 0 1 0 0 0 1 0 0 3 0 0 0 0 3 0 0 0 0 0 0 10 0 1017.5455 C9JZR2;O60716;E9PKY0 C9JZR2 345 354 CTNND1 Catenin delta-1 yes no 2 0.00091575 109.24 By MS/MS 1 0 0 0 2090 624 2313 5226 4857 4857 1129;1130 1 GSLASLDSLRK APLAQHERGSLASLDS ASLDSLRKGGPPPPNW R G S R K G 1 1 0 1 0 0 0 1 0 0 3 1 0 0 0 3 0 0 0 0 0 0 11 1 1145.6404 C9JZR2;O60716;E9PKY0 C9JZR2 345 355 CTNND1 Catenin delta-1 yes no 2 1.3375E-05 126.5 By MS/MS By MS/MS 2 2 37716000 21210000 16506000 2091 624 2314 5227;5228;5229;5230 4858;4859;4860;4861 4859 1129;1130 4 GSLLGSMK KKGGLFRRGSLLGSMK GSLLGSMKLRKSESKS R G S M K L 0 0 0 0 0 0 0 2 0 0 2 1 1 0 0 2 0 0 0 0 0 0 8 0 791.42112 Q9HDC5 Q9HDC5 215 222 JPH1 Junctophilin-1 yes yes 2 0.027419 78.098 By MS/MS 1 0 0 0 2092 2700 2315 5231 4862 4862 1 GSLPQLVSPIVSR TVQLVIARGSLPQLVS LVSPIVSRSPSAASTI R G S S R S 0 1 0 0 0 1 0 1 0 1 2 0 0 0 2 3 0 0 0 2 0 0 13 0 1351.7823 F5H1U9;O75970 F5H1U9 223 235 MPDZ Multiple PDZ domain protein yes no 2 0.029295 55.186 By MS/MS By matching 1 1 4693600 2782800 1910800 2093 879 2316 5232;5233 4863 4863 1 GSLQAHDTSSLPTVIMR KVKMKQPKGSLQAHDT SLPTVIMRNKPSQPKE K G S M R N 1 1 0 1 0 1 0 1 1 1 2 0 1 0 1 3 2 0 0 1 0 0 17 0 1811.92 Q12802;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802 1848 1864 AKAP13 A-kinase anchor protein 13 yes no 2;3 1.3256E-10 121.51 By MS/MS By MS/MS 3 3 31355000 18764000 12591000 2094 1877 2317;2318 5234;5235;5236;5237;5238;5239 4864;4865;4866;4867 4865 243 3558;3559 4 GSLSPVTKPR DWRSPKQRGSLSPVTK LSPVTKPRSQTYPDVG R G S P R S 0 1 0 0 0 0 0 1 0 0 1 1 0 0 2 2 1 0 0 1 0 0 10 1 1040.5978 F5H4N6;Q9Y3R0;H0YFK8;F5H4P8;F5H4Q7 F5H4N6 792 801 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.0044838 83.137 By MS/MS By MS/MS 1 1 24535000 13132000 11403000 2095 885 2319 5240;5241 4868;4869 4868 1591 2 GSLSTDKDTAYGSFQNGHGIK GFTSPANRGSLSTDKD FQNGHGIKREDSRGSL R G S I K R 1 0 1 2 0 1 0 4 1 1 1 2 0 1 0 3 2 0 1 0 0 0 21 1 2182.0291 A6NIW2;Q5JSL3;A0A0J9YW64 A6NIW2 1213 1233 DOCK11 Dedicator of cytokinesis protein 11 yes no 3 2.0202E-08 86.453 By MS/MS By MS/MS 1 1 12281000 7488700 4792300 2096 418 2320 5242;5243 4870;4871 4871 7262 2 GSPDGSLQTGKPSAPK ALKLRSPRGSPDGSLQ TGKPSAPKKLKLDVGE R G S P K K 1 0 0 1 0 1 0 3 0 0 1 2 0 0 3 3 1 0 0 0 0 0 16 1 1525.7736 E7EV54;C9JFV4;Q8IZL8 E7EV54 333 348 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 2;3 1.4633E-20 142.4 By MS/MS By MS/MS 2 2 268810000 133450000 135360000 2097 590 2321 5244;5245;5246;5247 4872;4873;4874;4875 4872 1073;1074 4 GSPEEELPLPAFEK CHSLGTARGSPEEELP LPLPAFEKLNPYPTPS R G S E K L 1 0 0 0 0 0 4 1 0 0 2 1 0 1 3 1 0 0 0 0 0 0 14 0 1541.7613 Q5JTD0 Q5JTD0 299 312 TJAP1 Tight junction-associated protein 1 yes yes 2 1.1385E-16 153.32 By MS/MS By MS/MS 1 1 9683900 6048300 3635600 2098 2076 2322 5248;5249 4876;4877 4876 4090 2 GSPHYFSPFRPY RDSPYQSRGSPHYFSP YFSPFRPY________ R G S P Y - 0 1 0 0 0 0 0 1 1 0 0 0 0 2 3 2 0 0 2 0 0 0 12 1 1453.6779 Q13242 Q13242 210 221 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 2;3 1.2674E-06 122.39 By MS/MS By MS/MS 3 3 240320000 101090000 139230000 2099 1906 2323;2324 5250;5251;5252;5253;5254;5255 4878;4879;4880;4881;4882;4883;4884 4882 3645;3646 7 GSPLAEGPQAFFPER LGRAGSPRGSPLAEGP PQAFFPERGPSPRPPA R G S E R G 2 1 0 0 0 1 2 2 0 0 1 0 0 2 3 1 0 0 0 0 0 0 15 0 1601.7838 Q8WUF5 Q8WUF5 186 200 PPP1R13L RelA-associated inhibitor yes yes 2 0.0098807 60.474 By MS/MS 1 1781100 0 1781100 2100 2400 2325 5256 4885 4885 4797 1 GSPNTASAEATLPR YSSLREARGSPNTASA SAEATLPRWRAGEQAQ R G S P R W 3 1 1 0 0 0 1 1 0 0 1 0 0 0 2 2 2 0 0 0 0 0 14 0 1370.679 Q6PJG6 Q6PJG6 741 754 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.00087227 93.106 By MS/MS By MS/MS 1 1 10152000 6150900 4001000 2101 2161 2326 5257;5258 4886;4887 4886 4301 2 GSPTGGAQLLK GSHPQGPRGSPTGGAQ TGGAQLLKRKRKLGVV R G S L K R 1 0 0 0 0 1 0 3 0 0 2 1 0 0 1 1 1 0 0 0 0 0 11 0 1027.5662 Q14684 Q14684 512 522 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 1.8427E-06 147.28 By MS/MS By MS/MS 1 1 32127000 17509000 14618000 2102 1955 2327 5259;5260 4888;4889 4888 3790 2 GSPTRPNPPVR GTPAGSARGSPTRPNP TRPNPPVRNLHQSGFS R G S V R N 0 2 1 0 0 0 0 1 0 0 0 0 0 0 4 1 1 0 0 1 0 0 11 1 1176.6364 H0YBT4;Q14195 H0YBT4 160 170 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 3 0.019864 53.947 By MS/MS By MS/MS 1 1 10288000 4978900 5309600 2103 1054 2328 5261;5262 4890;4891 4891 1959 2 GSPVFLPR KMDGKESKGSPVFLPR GSPVFLPRKENSSVEA K G S P R K 0 1 0 0 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 1 0 0 8 0 871.49159 J3QSD7;Q9NYV4 J3QSD7 421 428 CDK12 Cyclin-dependent kinase 12 yes no 2 0.01549 78.264 By MS/MS By MS/MS 1 1 10929000 6301100 4627800 2104 1260 2329 5263;5264 4892;4893 4892 2282 2 GSRPPLILQSQSLPCSSPR AGSEGTPKGSRPPLIL SLPCSSPRDVPPDILL K G S P R D 0 2 0 0 1 2 0 1 0 1 3 0 0 0 4 5 0 0 0 0 0 0 19 1 2079.0895 Q6KC79 Q6KC79 290 308 NIPBL Nipped-B-like protein yes yes 3 2.5912E-05 82.593 By MS/MS By MS/MS 1 1 36360000 19034000 17325000 2105 2147 2330 5265;5266 4894;4895 4894 4268;4269 2 GSSFEMTDDDSAIR HAPLRDSRGSSFEMTD TDDDSAIRALTQFPLP R G S I R A 1 1 0 3 0 0 1 1 0 1 0 0 1 1 0 3 1 0 0 0 0 0 14 0 1529.6304 H7BXY3;Q7L2E3 H7BXY3 196 209 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 2 0.0027135 77.744 By matching By MS/MS 1 1 11072000 5594200 5478100 2106 1151 2331 5267;5268 4896 4896 2095 1 GSSGENNNPGSPTVSNFR AHRSGLQRGSSGENNN SPTVSNFRQLQEKLVF R G S F R Q 0 1 4 0 0 0 1 3 0 0 0 0 0 1 2 4 1 0 0 1 0 0 18 0 1819.8085 D6R8Z7;D6RDZ7;D6RD37;D6RAX8;D6RBL1;D6RDZ9;D6RCK9 D6R8Z7 32 49 TSC22D3 yes no 2 0.0060938 61.102 By MS/MS By MS/MS 1 1 16016000 8079200 7936900 2107 642 2332 5269;5270 4897;4898 4898 1163 2 GSSGGYGSGGAALQPK APILEKPKGSSGGYGS GGAALQPKGGLFQGGV K G S P K G 2 0 0 0 0 1 0 6 0 0 1 1 0 0 1 3 0 0 1 0 0 0 16 0 1392.6634 Q8TF74;J3QKM5 Q8TF74 69 84 WIPF2 WAS/WASL-interacting protein family member 2 yes no 2 0.027466 49.28 By matching By MS/MS 1 1 10390000 5904900 4485100 2108 2394 2333 5271;5272 4899 4899 7815 0 GSSKQQSEEDLLLQDFSR ________________ LLLQDFSRNLSAKSSA K G S S R N 0 1 0 2 0 3 2 1 0 0 3 1 0 1 0 4 0 0 0 0 0 0 18 1 2065.9916 C9JA28;Q9UNL2 C9JA28 5 22 SSR3 Translocon-associated protein subunit gamma yes no 3 0.024421 44.258 By MS/MS By MS/MS 1 1 3940100 2059000 1881100 2109 576 2334 5273;5274 4900;4901 4900 1054 2 GSSLSGTDDGAQEVVK NGDAPRERGSSLSGTD DGAQEVVKDILEDVVT R G S V K D 1 0 0 2 0 1 1 3 0 0 1 1 0 0 0 3 1 0 0 2 0 0 16 0 1548.7267 Q9Y6D5 Q9Y6D5 275 290 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 7.7394E-15 130.27 By MS/MS By MS/MS 1 1 9158000 4669900 4488100 2110 2945 2335 5275;5276 4902;4903 4903 6120 2 GSSMGVRNSPQALR GPMQGVPRGSSMGVRN RNSPQALRRTASGGRT R G S L R R 1 2 1 0 0 1 0 2 0 0 1 0 1 0 1 3 0 0 0 1 0 0 14 1 1458.7361 Q7L7X3 Q7L7X3 957 970 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 2;3 0.0057764 68.972 By MS/MS By matching 2 2 23859000 13203000 10656000 2111 2201 2336 5277;5278;5279;5280 4904;4905 4904 4386;4387;4388 2 GSSMGVRNSPQALRR GPMQGVPRGSSMGVRN NSPQALRRTASGGRTE R G S R R T 1 3 1 0 0 1 0 2 0 0 1 0 1 0 1 3 0 0 0 1 0 0 15 2 1614.8373 Q7L7X3 Q7L7X3 957 971 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 3 0.014559 55.196 By MS/MS By MS/MS 1 1 20708000 12966000 7742700 2112 2201 2337 5281;5282 4906;4907 4906 4386;4387;4388 2 GSSPGIQDTLEAEDGAFETDEAPEDR EPDPKKIKGSSPGIQD TDEAPEDRILSCRKAG K G S D R I 3 1 0 4 0 1 5 3 0 1 1 0 0 1 2 2 2 0 0 0 0 0 26 0 2735.1682 Q9UNX4 Q9UNX4 239 264 WDR3 WD repeat-containing protein 3 yes yes 2 0.0017124 56.959 By matching By MS/MS 1 1 55857000 27978000 27879000 2113 2865 2338 5283;5284 4908 4908 5903;5904 1 GSSPGPRPVEGTPASR KTKSQTHRGSSPGPRP VEGTPASRTQDPSSPG R G S S R T 1 2 0 0 0 0 1 3 0 0 0 0 0 0 4 3 1 0 0 1 0 0 16 1 1550.7801 Q13112 Q13112 408 423 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2;3 8.9383E-05 102.07 By MS/MS By MS/MS 2 2 393890000 173530000 220350000 2114 1897 2339 5285;5286;5287;5288 4909;4910;4911 4909 3620;3621 3 GSSPTPPCSPVQPSK TAEAIGLKGSSPTPPC CSPVQPSKQLEYLARI K G S S K Q 0 0 0 0 1 1 0 1 0 0 0 1 0 0 5 4 1 0 0 1 0 0 15 0 1524.7242 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3 H0YBY0 97 111 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 2 0.011034 64.565 By MS/MS By MS/MS 2 1 15382000 7880200 7502300 2115 242 2340;2341 5289;5290;5291 4912;4913 4913 439 2 GSSPTRVLDEGKVNMAPK TMMNSSSRGSSPTRVL GKVNMAPKGPPPFPGV R G S P K G 1 1 1 1 0 0 1 2 0 0 1 2 1 0 2 2 1 0 0 2 0 0 18 2 1884.9727 Q5JRA6;H7C0T4 Q5JRA6 1743 1760 MIA3 Melanoma inhibitory activity protein 3 yes no 3 0.0012801 70.802 By MS/MS By matching 1 1 14426000 9887300 4538500 2116 2071 2342 5292;5293 4914 4914 4065;4066 1 GSSWLQDGSAR RLKLEGLRGSSWLQDG WLQDGSARSSPPLRTP R G S A R S 1 1 0 1 0 1 0 2 0 0 1 0 0 0 0 3 0 1 0 0 0 0 11 0 1162.5367 A0A0A6YYC0;E9PJN1;O75676 A0A0A6YYC0 648 658 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 yes no 2 0.0098302 78.287 By MS/MS 1 0 0 0 2117 252 2343 5294 4915 4915 457 1 GSVPLSSSPPATHFPDETEITNPVPK DLEADDVKGSVPLSSS EITNPVPKKNVTVKKT K G S P K K 1 0 1 1 0 0 2 1 1 1 1 1 0 1 6 4 3 0 0 2 0 0 26 0 2703.3392 P11388 P11388 1386 1411 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.00025944 59.943 By MS/MS By MS/MS 1 2 143480000 72411000 71068000 2118 1565 2344 5295;5296;5297 4916;4917 4917 2869;2870;2871 2 GSVQAPEISSNSIK LLSLQKDKGSVQAPEI EISSNSIKDTLAVN__ K G S I K D 1 0 1 0 0 1 1 1 0 2 0 1 0 0 1 4 0 0 0 1 0 0 14 0 1415.7256 C9JG86;Q9BYW2;H7BZ93;H7BXT4;H7C3H4 C9JG86 1321 1334 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.018091 52.278 By MS/MS By matching 1 1 5940000 3345000 2594900 2119 591 2345 5298;5299 4918 4918 1077;1078 0 GSVSDCSDGTSELEEPLGEDPR VVARRLGRGSVSDCSD EPLGEDPRARPPGPPD R G S P R A 0 1 0 3 1 0 4 3 0 0 2 0 0 0 2 4 1 0 0 1 0 0 22 0 2334.9758 P50548 P50548 184 205 ERF ETS domain-containing transcription factor ERF yes yes 2 0.027454 46.15 By MS/MS By matching 1 1 6800500 3710300 3090200 2120 1739 2346 5300;5301 4919 4919 3292 1 GSVSDEEMMELR ________________ DEEMMELREAFAKVDT R G S L R E 0 1 0 1 0 0 3 1 0 0 1 0 2 0 0 2 0 0 0 1 0 0 12 0 1381.5854 Q5TBN3;P13796;Q5TBN5 Q5TBN3 4 15 LCP1 Plastin-2 yes no 2 0.0035104 78.964 By MS/MS By MS/MS 3 4 18693000 9007300 9685900 2121 1576 2347;2348 5302;5303;5304;5305;5306;5307;5308 4920;4921;4922;4923;4924 4924 192;193 2896 3 GSVSSVSPKPPSSFK ARSPINRRGSVSSVSP PKPPSSFKMSIRNWVT R G S F K M 0 0 0 0 0 0 0 1 0 0 0 2 0 1 3 6 0 0 0 2 0 0 15 1 1489.7777 F5GZ90;Q9NZJ0 F5GZ90 442 456 DTL Denticleless protein homolog yes no 2 0.012049 61.186 By matching By MS/MS 1 1 7872400 4575700 3296700 2122 867 2349 5309;5310 4925 4925 1556 1 GSYGDLGGPIITTQVTIPK DYSYAGGRGSYGDLGG TTQVTIPKDLAGSIIG R G S P K D 0 0 0 1 0 1 0 4 0 3 1 1 0 0 2 1 3 0 1 1 0 0 19 0 1916.0255 P61978;Q5T6W2;S4R359 P61978 378 396 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 1.1587E-20 136.93 By MS/MS By MS/MS 1 1 13001000 7512600 5488700 2123 1788 2350 5311;5312 4926;4927 4927 7655 2 GSYGSDAEEEEYR SRPYQDTRGSYGSDAE DAEEEEYRQQLSEHSK R G S Y R Q 1 1 0 1 0 0 4 2 0 0 0 0 0 0 0 2 0 0 2 0 0 0 13 0 1490.5797 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1214 1226 TJP2 Tight junction protein ZO-2 yes no 2 0.0057143 70.889 By matching By MS/MS 1 1 5497100 2981300 2515800 2124 368 2351 5313;5314 4928 4928 689 1 GSYRGGSISVQVNSIKFDSE HEKTKKKRGSYRGGSI NSIKFDSE________ R G S S E - 0 1 1 1 0 1 1 3 0 2 0 1 0 1 0 5 0 0 1 2 0 0 20 2 2129.0389 A0A0A0MRM9;Q14978 A0A0A0MRM9 689 708 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 6.1771E-08 86.18 By MS/MS By matching 1 1 6419500 4797200 1622300 2125 191 2352 5315;5316 4929 4929 341 1 GSYVSIHSSGFR APAKKDVKGSYVSIHS SIHSSGFRDFLLKPEL K G S F R D 0 1 0 0 0 0 0 2 1 1 0 0 0 1 0 4 0 0 1 1 0 0 12 0 1295.6258 F6S4E6;A0A0A0MT12;F6TRA5;K7EQN7;F6WLT2;Q5STU3;O00148;Q13838;K7ENP6;A0A0G2JHN7;K7EL56;K7EIL8;F6U6E2;K7EN69;F6S2B7;F6SXL5;F6QYI9;A0A0G2JJL7;K7EPJ3;F6R6M7 F6S4E6 37 48 DDX39B;DDX39A ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.0095042 74.944 By MS/MS 1 0 0 0 2126 232 2353 5317 4930 4930 7210 1 GTDTQTPAVLSPSK LRQNAPPKGTDTQTPA PAVLSPSKTQATLKPK K G T S K T 1 0 0 1 0 1 0 1 0 0 1 1 0 0 2 2 3 0 0 1 0 0 14 0 1400.7147 P46087 P46087 722 735 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 7.3697E-261 275.76 By MS/MS By MS/MS 1 1 62915000 32355000 30560000 2127 1707 2354 5318;5319 4931;4932;4933 4931 3156 3 GTDTQTPAVLSPSKTQATLKPK LRQNAPPKGTDTQTPA TQATLKPKDHHQPLGR K G T P K D 2 0 0 1 0 2 0 1 0 0 2 3 0 0 3 2 5 0 0 1 0 0 22 2 2268.2325 P46087 P46087 722 743 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 3 2.8335E-19 123.63 By MS/MS By MS/MS 1 1 46006000 26162000 19844000 2128 1707 2355 5320;5321 4934;4935 4935 3156 2 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTK GTPALNAKGTEAPAVV APRPDHTKSIYTRSVI K G T T K S 4 1 0 4 0 0 6 1 1 1 0 1 0 0 5 0 4 0 0 3 0 0 31 1 3314.5426 Q13177 Q13177 161 191 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 3;4 0.0082932 45.558 By matching By MS/MS 2 2 33622000 17040000 16582000 2129 1901 2356 5322;5323;5324;5325 4936;4937 4937 6789;6790 2 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR HSEGSLQKGTEPSPGG PEEAQPPRLGQERDPG K G T P R L 2 2 0 0 0 2 4 5 0 0 0 0 0 0 11 3 2 0 0 2 0 0 33 1 3258.5905 I3L1Q2;Q8WUZ0 I3L1Q2 110 142 BCL7C B-cell CLL/lymphoma 7 protein family member C yes no 3 0.0096289 42.536 By matching By MS/MS 1 1 20942000 9664800 11277000 2130 1201 2357 5326;5327 4938 4938 2181 1 GTGASGSFKLNK KGTLVQTKGTGASGSF SGSFKLNKKAASGEAK K G T N K K 1 0 1 0 0 0 0 3 0 0 1 2 0 1 0 2 1 0 0 0 0 0 12 1 1165.6091 P16402;P16403;Q02539;P16401;P10412 P10412 98 109 HIST1H1D;HIST1H1C;HIST1H1A;HIST1H1B;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.1;Histone H1.5;Histone H1.4 no no 2 0.0029591 89.747 By MS/MS By MS/MS 1 1 21510000 12679000 8830700 2131 1556;1586 2358 5328;5329 4939;4940 4939 2857;2858 2 GTGASGSFKLNKK KGTLVQTKGTGASGSF GSFKLNKKAASGEAKP K G T K K A 1 0 1 0 0 0 0 3 0 0 1 3 0 1 0 2 1 0 0 0 0 0 13 2 1293.7041 P16402;P16403;Q02539;P16401;P10412 P10412 98 110 HIST1H1D;HIST1H1C;HIST1H1A;HIST1H1B;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.1;Histone H1.5;Histone H1.4 no no 2;3 2.2932E-06 123.68 By MS/MS By matching 2 2 37563000 21631000 15932000 2132 1556;1586 2359 5330;5331;5332;5333 4941;4942 4942 2857;2858 2 GTGGVDTAAVGGVFDVSNADR KRLRLQKRGTGGVDTA FDVSNADRLGFSEVEL R G T D R L 3 1 1 3 0 0 0 5 0 0 0 0 0 1 0 1 2 0 0 4 0 0 21 0 1963.9235 P12277;H0YJG0 P12277 321 341 CKB Creatine kinase B-type yes no 2 6.6097E-08 89.136 By matching By MS/MS 1 1 8322000 4003100 4318900 2133 1571 2360 5334;5335 4943 4943 1 GTGQSDDSDIWDDTALIK EDSVLFRRGTGQSDDS WDDTALIKAYDKAVAS R G T I K A 1 0 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 18 0 1935.8698 B4DP61;E7EQZ4;Q16637 B4DP61 24 41 SMN2;SMN1 Survival motor neuron protein yes no 2;3 5.1429E-09 115.09 By MS/MS By MS/MS 3 3 269520000 133540000 135980000 2134 486 2361;2362 5336;5337;5338;5339;5340;5341 4944;4945;4946;4947;4948 4946 918;919;6350 5 GTGSSSSGVLMVGPNFR GRSGHNTRGTGSSSSG LMVGPNFRVGKKIGCG R G T F R V 0 1 1 0 0 0 0 4 0 0 1 0 1 1 1 4 1 0 0 2 0 0 17 0 1651.7988 Q9Y6M4 Q9Y6M4 28 44 CSNK1G3 Casein kinase I isoform gamma-3 yes yes 2 2.3769E-06 110.77 By MS/MS By MS/MS 3 3 24158000 13855000 10303000 2135 2951 2363;2364;2365 5342;5343;5344;5345;5346;5347 4949;4950;4951;4952;4953 4951 390 6130;6131;6132;7142 5 GTIQVITQGTSLK RAWAGSPKGTIQVITQ ITQGTSLKNAGNCLSP K G T L K N 0 0 0 0 0 2 0 2 0 2 1 1 0 0 0 1 3 0 0 1 0 0 13 0 1344.7613 Q5SZU1;O43175 Q5SZU1 318 330 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.0023269 98.754 By MS/MS By matching 1 1 4905800 2300000 2605700 2136 1373 2366 5348;5349 4954 4954 1 GTLDPVEK ELNADLFRGTLDPVEK GTLDPVEKALRDAKLD R G T E K A 0 0 0 1 0 0 1 1 0 0 1 1 0 0 1 0 1 0 0 1 0 0 8 0 857.44945 P11142;E9PKE3;E9PN89;E9PNE6;A8K7Q2 P11142 312 319 HSPA8 Heat shock cognate 71 kDa protein yes no 2 0.012255 98.997 By matching By MS/MS 1 1 5437300 2383200 3054100 2137 1560 2367 5350;5351 4955 4955 1 GTLSDSEIETNSATSTIFGK SVHLASSRGTLSDSEI ATSTIFGKAHSLKPSI R G T G K A 1 0 1 1 0 0 2 2 0 2 1 1 0 1 0 4 4 0 0 0 0 0 20 0 2056.9801 F8W8U2;A0A0A0MRB5;Q8WXG6 F8W8U2 46 65 MADD MAP kinase-activating death domain protein yes no 2 5.0991E-08 90.385 By MS/MS By MS/MS 1 1 14833000 6841900 7991500 2138 176 2368 5352;5353 4956;4957 4956 314 2 GTLVQTK GLKSLVSKGTLVQTKG KGTLVQTKGTGASGSF K G T T K G 0 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 2 0 0 1 0 0 7 0 745.4334 P16402;P16403;Q02539;P16401;P10412 P10412 91 97 HIST1H1D;HIST1H1C;HIST1H1A;HIST1H1B;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.1;Histone H1.5;Histone H1.4 no no 2 0.015673 101.21 By MS/MS By MS/MS 1 2 4589000 2367100 2221900 2139 1556;1586 2369 5354;5355;5356 4958;4959 4958 2 GTNTSSPYDAGADYLR SSQVMLSKGTNTSSPY DAGADYLRACPKCNVQ K G T L R A 2 1 1 2 0 0 0 2 0 0 1 0 0 0 1 2 2 0 2 0 0 0 16 0 1686.7485 Q9UJJ2;Q8ND82 Q9UJJ2 222 237 ZNF280C Zinc finger protein 280C yes no 2 0.001938 72.615 By matching By MS/MS 1 1 15315000 7663700 7651700 2140 2343 2370 5357;5358 4960 4960 4697 1 GTPLYGQPSWWGDDEVDEKR MDISAMPRGTPLYGQP DDEVDEKRAFKTNGKP R G T K R A 0 1 0 3 0 1 2 3 0 0 1 1 0 0 2 1 1 2 1 1 0 0 20 1 2334.0553 H0Y2V6;Q5SW79 H0Y2V6 75 94 CEP170 Centrosomal protein of 170 kDa yes no 3 0.0054676 51.39 By MS/MS By MS/MS 1 1 7536300 4054000 3482200 2141 1006 2371 5359;5360 4961;4962 4961 6503 2 GTPPLTPSDSPQTR VFTPPLPKGTPPLTPS PSDSPQTRTASGAVDE K G T T R T 0 1 0 1 0 1 0 1 0 0 1 0 0 0 4 2 3 0 0 0 0 0 14 0 1452.7209 Q6NZY4 Q6NZY4 491 504 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 2 0.0020672 81.448 By MS/MS By MS/MS 1 1 17761000 10212000 7548500 2142 2149 2372 5361;5362 4963;4964;4965 4963 4276;4277 3 GTSFFPTAGGFRSPSPGLFR PCNRQTGRGTSFFPTA SPSPGLFRASLVSSAS R G T F R A 1 2 0 0 0 0 0 4 0 0 1 0 0 4 3 3 2 0 0 0 0 0 20 1 2085.0432 E7ESG2;Q9HAW4 E7ESG2 743 762 CLSPN Claspin yes no 3 0.008856 53.188 By MS/MS 1 5324200 5324200 0 2143 731 2373 5363 4966 4966 1308;1309 1 GTSHVFPINPYGGQPCVRTHMSPR WVVVSTLRGTSHVFPI VRTHMSPRVVNRMSRF R G T P R V 0 2 1 0 1 1 0 3 2 1 0 0 1 1 4 2 2 0 1 2 0 0 24 1 2694.2907 K7ESE9;Q9H6U6 K7ESE9 198 221 BCAS3 Breast carcinoma-amplified sequence 3 yes no 3 0.017173 41.115 By MS/MS By matching 1 1 9233400 4667100 4566300 2144 1292 2374 5364;5365 4967 4967 144 2325;2326 1 GTVIKPPVEEYEEMKSSYCSVIENMNK EKLVEREKGTVIKPPV SVIENMNKEKAFLFEK K G T N K E 0 0 2 0 1 0 5 1 0 2 0 3 2 0 2 3 1 0 2 3 0 0 27 2 3160.4767 Q9P0K7 Q9P0K7 566 592 RAI14 Ankycorbin yes yes 3 0.029159 40.986 By MS/MS 1 0 0 0 2145 2773 2375 5366 4968 4968 1 GTYGILSK SYSSASTRGTYGILSK GTYGILSKTVGTQDTP R G T S K T 0 0 0 0 0 0 0 2 0 1 1 1 0 0 0 1 1 0 1 0 0 0 8 0 837.45962 Q08378 Q08378 327 334 GOLGA3 Golgin subfamily A member 3 yes yes 2 0.0036008 102.51 By MS/MS By MS/MS 1 1 10500000 6304500 4195800 2146 1865 2376 5367;5368 4969;4970 4970 7674 2 GTYVPSSPTR TYGAAAGKGTYVPSSP YVPSSPTRLAYTDDLG K G T T R L 0 1 0 0 0 0 0 1 0 0 0 0 0 0 2 2 2 0 1 1 0 0 10 0 1063.5298 Q9Y4P8 Q9Y4P8 407 416 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 yes yes 2 0.00091125 107.09 By MS/MS By MS/MS 1 1 74720000 36762000 37958000 2147 2923 2377 5369;5370 4971;4972 4971 6077;6078 2 GVAPADSPEAPR EFLASVARGVAPADSP ADSPEAPRRSFAGGTW R G V P R R 3 1 0 1 0 0 1 1 0 0 0 0 0 0 3 1 0 0 0 1 0 0 12 0 1165.5728 Q9P2G1 Q9P2G1 731 742 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 yes yes 2 0.0034153 82.069 By MS/MS 1 4258100 4258100 0 2148 2791 2378 5371 4973;4974 4974 5731 2 GVASDSGGGVSPALAAK GSAHLLERGVASDSGG VSPALAAKASGAPAAA R G V A K A 4 0 0 1 0 0 0 4 0 0 1 1 0 0 1 3 0 0 0 2 0 0 17 0 1442.7365 Q9NZ56 Q9NZ56 506 522 FMN2 Formin-2 yes yes 2 0.025155 49.621 By matching By MS/MS 1 1 4358700 2291800 2066800 2149 2763 2379 5372;5373 4975 4975 1 GVDEVTIVNILTNR IETAIKTKGVDEVTIV IVNILTNRSN______ K G V N R S 0 1 2 1 0 0 1 1 0 2 1 0 0 0 0 0 2 0 0 3 0 0 14 0 1541.8413 H0YMD9;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355 H0YMD9 50 63 ANXA2 Annexin;Annexin A2 yes no 2 4.3697E-12 134.3 By MS/MS By MS/MS 1 1 7414800 3224500 4190300 2150 1087 2380 5374;5375 4976;4977 4976 2 GVEEEEEDGEMRE CNNVLYIRGVEEEEED EEDGEMRE________ R G V R E - 0 1 0 1 0 0 7 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 13 1 1536.5886 P62306 P62306 74 86 SNRPF Small nuclear ribonucleoprotein F yes yes 2 2.3247E-10 141.08 By MS/MS By MS/MS 1 1 10412000 5686500 4725700 2151 1796 2381 5376;5377 4978;4979 4979 2 GVELCFGIQHYAGKVLYDASGVLEKNR CKYFWRPKGVELCFGI SGVLEKNRDTLPADVV K G V N R D 2 1 1 1 1 1 2 4 1 1 3 2 0 1 0 1 0 0 2 3 0 0 27 2 3022.5335 F5H2J1;Q8WXR4 F5H2J1 836 862 MYO3B Myosin-IIIb yes no 3 0.028897 42.612 By MS/MS 1 0 0 0 2152 881 2382 5378 4980 4980 7401 1 GVEPSPSPIKPGDIK NRLDGKKKGVEPSPSP PIKPGDIKRGIPNYEF K G V I K R 0 0 0 1 0 0 1 2 0 2 0 2 0 0 4 2 0 0 0 1 0 0 15 1 1519.8246 Q92890;C9JNP9 Q92890 241 255 UFD1L Ubiquitin fusion degradation protein 1 homolog yes no 2 0.00043546 95.477 By MS/MS By MS/MS 1 1 13962000 7869100 6093100 2153 2444 2383 5379;5380 4981;4982 4981 4921 2 GVEPSPSPIKPGDIKR NRLDGKKKGVEPSPSP IKPGDIKRGIPNYEFK K G V K R G 0 1 0 1 0 0 1 2 0 2 0 2 0 0 4 2 0 0 0 1 0 0 16 2 1675.9257 Q92890 Q92890 241 256 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 3 0.0008845 76.728 By MS/MS 1 6459700 6459700 0 2154 2444 2384 5381 4983 4983 4921 1 GVGYETILK ________________ VGYETILKEQKGQSMF R G V L K E 0 0 0 0 0 0 1 2 0 1 1 1 0 0 0 0 1 0 1 1 0 0 9 0 978.5386 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84 J9JIE0 6 14 GPRC5C G-protein coupled receptor family C group 5 member C yes no 2 0.010585 66.073 By MS/MS 1 1212500 0 1212500 2155 272 2385 5382 4984 4984 7219 1 GVHIHQAGGSPPASSTSSSSLTNDVAK APASPTNKGVHIHQAG SLTNDVAKQPVSRDLP K G V A K Q 3 0 1 1 0 1 0 3 2 1 1 1 0 0 2 7 2 0 0 2 0 0 27 0 2591.2576 Q8N122;I3L436 Q8N122 868 894 RPTOR Regulatory-associated protein of mTOR yes no 3 0.0052288 48.331 By MS/MS By matching 1 1 11699000 6338800 5360700 2156 2296 2386 5383;5384 4985 4985 4606 1 GVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLELASR PGPPPSRRGVHKEGSL PTLELASRSPSGGAAG R G V S R S 4 1 0 1 0 2 6 6 1 0 6 1 0 0 4 5 1 0 1 1 0 0 40 1 4075.9974 Q96CX2 Q96CX2 145 184 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 4 1.8966E-08 65.774 By MS/MS By matching 2 1 113770000 73247000 40521000 2157 2469 2387 5385;5386;5387 4986;4987 4987 4968;4969 2 GVLDLDRPGEPAGEESPGPLQER RMKTPTVRGVLDLDRP SPGPLQERSPLLPLPE R G V E R S 1 2 0 2 0 1 4 4 0 0 3 0 0 0 4 1 0 0 0 1 0 0 23 1 2417.1823 Q9UMN6 Q9UMN6 2333 2355 KMT2B Histone-lysine N-methyltransferase 2B yes yes 3 2.4382E-25 121 By MS/MS By MS/MS 1 1 15363000 7892900 7470100 2158 2857 2388 5388;5389 4988;4989 4988 5884 2 GVLEGDDVLFYDESPPPRPK TMTPKLGRGVLEGDDV ESPPPRPKLSALAEAK R G V P K L 0 1 0 3 0 0 2 2 0 0 2 1 0 1 4 1 0 0 1 2 0 0 20 1 2229.0954 Q5T670;Q7L590 Q5T670 630 649 MCM10 Protein MCM10 homolog yes no 3 0.00079899 69.069 By MS/MS By MS/MS 1 1 3855300 2148800 1706500 2159 2100 2389 5390;5391 4990;4991 4990 4156;7743 2 GVLEPLTNLR DPVAAFKRGVLEPLTN LEPLTNLRNEQKIPEE R G V L R N 0 1 1 0 0 0 1 1 0 0 3 0 0 0 1 0 1 0 0 1 0 0 10 0 1110.6397 Q9C0D5;A0A0A0MSM4 Q9C0D5 568 577 TANC1 Protein TANC1 yes no 3 0.018497 54.722 By MS/MS 1 0 0 0 2160 2619 2390 5392 4992 4992 1 GVLGKSPLSALAR HQKALPKKGVLGKSPL SPLSALARKKARLSLV K G V A R K 2 1 0 0 0 0 0 2 0 0 3 1 0 0 1 2 0 0 0 1 0 0 13 1 1267.7612 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 1285 1297 MYBBP1A Myb-binding protein 1A yes no 2 0.0073227 71.316 By matching By MS/MS 1 1 4874100 2936700 1937500 2161 2570 2391 5393;5394 4993 4993 5187 1 GVLHTFSPSPK RGSATTPRGVLHTFSP HTFSPSPKLQNSASAT R G V P K L 0 0 0 0 0 0 0 1 1 0 1 1 0 1 2 2 1 0 0 1 0 0 11 0 1168.6241 Q86YP4 Q86YP4 540 550 GATAD2A Transcriptional repressor p66-alpha yes yes 2 5.4996E-30 184.98 By MS/MS By MS/MS 1 1 12240000 6653100 5586500 2162 2256 2392 5395;5396 4994;4995 4995 4523 2 GVNTFSPEGR LTRSEYDRGVNTFSPE NTFSPEGRLFQVEYAI R G V G R L 0 1 1 0 0 0 1 2 0 0 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1062.5094 P28066 P28066 11 20 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.00066135 108.72 By MS/MS By MS/MS 1 1 6350500 3359700 2990800 2163 1639 2393 5397;5398 4996;4997;4998 4998 3028 3 GVPAGNSDTEGGQPGR ISVVSATKGVPAGNSD TEGGQPGRKRRWGAST K G V G R K 1 1 1 1 0 1 1 5 0 0 0 0 0 0 2 1 1 0 0 1 0 0 16 0 1497.6808 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;G3V3T3 S4R3H4 774 789 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 2 8.9238E-07 118.77 By MS/MS By MS/MS 1 1 33159000 15832000 17327000 2164 725;968;971 2394 5399;5400 4999;5000;5001;5002 5002 1294 4 GVPVISVKTSGSKER TVVMDKSKGVPVISVK KTSGSKERASKSQDRK K G V E R A 0 1 0 0 0 0 1 2 0 1 0 2 0 0 1 3 1 0 0 3 0 0 15 2 1542.873 Q15424 Q15424 571 585 SAFB Scaffold attachment factor B1 yes yes 2;3 0.0015847 106.38 By MS/MS By MS/MS 2 2 43586000 26117000 17469000 2165 1990 2395 5401;5402;5403;5404 5003;5004;5005 5004 3882;3883;6833 3 GVQVPVSPGTIPQPVAR PWRQEWEKGVQVPVSP TIPQPVARVVSEEKSL K G V A R V 1 1 0 0 0 2 0 2 0 1 0 0 0 0 4 1 1 0 0 4 0 0 17 0 1700.9574 D6RCS1;D6RC05;D6RBB3;D6RFK0;D6RGE7;Q6IE81 D6RCS1 83 99 JADE1 Protein Jade-1 yes no 2 3.77E-05 87.719 By MS/MS By MS/MS 1 1 3739500 1897600 1841900 2166 658 2396 5405;5406 5006;5007 5007 1188 2 GVSASAVPFTPSSPLLSCSQEGSR AGLYRIRKGVSASAVP SCSQEGSRHTSKLSRH K G V S R H 2 1 0 0 1 1 1 2 0 0 2 0 0 1 3 7 1 0 0 2 0 0 24 0 2420.1642 J3QRU8;Q9Y2X7;J3QL89 J3QRU8 559 582 GIT1 ARF GTPase-activating protein GIT1 yes no 2 0.001079 60.564 By MS/MS By matching 1 1 5755900 3344400 2411500 2167 1258 2397 5407;5408 5008 5008 2275;2276;2277 1 GVSGVDLYR SPYEHLLRGVSGVDLY VSGVDLYRSHIPLAFD R G V Y R S 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 1 0 0 1 2 0 0 9 0 964.49779 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7 C9JE98 1607 1615 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.013561 70.028 By MS/MS By MS/MS 1 1 62929000 34453000 28476000 2168 552 2398 5409;5410 5009;5010 5010 1016 2 GVSMPNMLEPK MPAMRMDRGVSMPNML MPNMLEPKIFPYEMLM R G V P K I 0 0 1 0 0 0 1 1 0 0 1 1 2 0 2 1 0 0 0 1 0 0 11 0 1201.5835 J3QSX6;F8W8M4;A0A0A0MRL6;O14639 J3QSX6 327 337 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.00059904 107.09 By MS/MS By MS/MS 2 3 23459000 11145000 12314000 2169 189 2399;2400 5411;5412;5413;5414;5415 5011;5012;5013 5013 20 336 3 GVSMSLPSSPLLPR TYRVSLAKGVSMSLPS PSSPLLPRQSHLVQSR K G V P R Q 0 1 0 0 0 0 0 1 0 0 3 0 1 0 3 4 0 0 0 1 0 0 14 0 1439.7806 Q9C0D5 Q9C0D5 59 72 TANC1 Protein TANC1 yes yes 2 0.0025546 78.655 By MS/MS By MS/MS 1 2 3463100 1925800 1537300 2170 2619 2401;2402 5416;5417;5418 5014;5015;5016 5015 348 5316;5317;5318 3 GVSQEKEAQISSAIVSSVQSK GSSQERSRGVSQEKEA IVSSVQSKITQDLMAK R G V S K I 2 0 0 0 0 3 2 1 0 2 0 2 0 0 0 6 0 0 0 3 0 0 21 1 2161.1226 Q12872 Q12872 907 927 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 3 0.0063449 50.232 By MS/MS By MS/MS 1 1 20088000 11259000 8829400 2171 1879 2403 5419;5420 5017;5018 5018 3567 2 GVTIKPTVDDD IGWGQIRRGVTIKPTV IKPTVDDD________ R G V D D - 0 0 0 3 0 0 0 1 0 1 0 1 0 0 1 0 2 0 0 2 0 0 11 1 1158.5768 Q2VIR3;P41091 Q2VIR3 462 472 EIF2S3L;EIF2S3 Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 yes no 2 1.1198E-05 128.6 By MS/MS By MS/MS 1 1 7905500 4292300 3613300 2172 1689 2404 5421;5422 5019;5020 5020 2 GVTIPYRPKPSSSPVIFAGGQDR TLSQSPPKGVTIPYRP IFAGGQDRYSTGSDSA K G V D R Y 1 2 0 1 0 1 0 3 0 2 0 1 0 1 4 3 1 0 1 2 0 0 23 2 2428.2863 Q15366;H3BSS4 Q15366 177 199 PCBP2 Poly(rC)-binding protein 2 yes no 3;4 2.7681E-06 80.236 By MS/MS By MS/MS 2 2 57546000 32011000 25535000 2173 1985 2405 5423;5424;5425;5426 5021;5022;5023;5024;5025 5022 3873;3874;3875 5 GVTQEVDGLSQTDGTLTYFDKVDK CIDGHKYKGVTQEVDG TYFDKVDKNREELFLR K G V D K N 0 0 0 4 0 2 1 3 0 0 2 2 0 1 0 1 4 0 1 3 0 0 24 1 2615.2603 Q8NB49;H7C0E8;A0A067XG54 Q8NB49 436 459 ATP11C Phospholipid-transporting ATPase IG;Phospholipid-transporting ATPase yes no 3 0.0014647 56.485 By MS/MS By MS/MS 1 1 13866000 6420200 7446100 2174 2330 2406 5427;5428 5026;5027 5026 4668;6960 2 GVVDSDDLPLNVSR PKYLNFVKGVVDSDDL DLPLNVSRETLQQHKL K G V S R E 0 1 1 3 0 0 0 1 0 0 2 0 0 0 1 2 0 0 0 3 0 0 14 0 1484.7471 P14625 P14625 435 448 HSP90B1 Endoplasmin yes yes 2 4.4144E-06 144.7 By MS/MS By MS/MS 1 1 12646000 6300800 6345600 2175 1580 2407 5429;5430 5028;5029 5029 2 GVVDSEDLPLNISR PEYLNFIRGVVDSEDL DLPLNISREMLQQSKI R G V S R E 0 1 1 2 0 0 1 1 0 1 2 0 0 0 1 2 0 0 0 2 0 0 14 0 1512.7784 P07900;P08238 P08238 379 392 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 2 3.6001E-45 182.92 By MS/MS By MS/MS 1 1 48445000 22588000 25857000 2176 1542;1540 2408 5431;5432 5030;5031;5032 5032 3 GVVIPTWNISPIKK KLKEVVEKGVVIPTWN WNISPIKKANEIKPPQ K G V K K A 0 0 1 0 0 0 0 1 0 3 0 2 0 0 2 1 1 1 0 2 0 0 14 1 1550.9184 A0A087WUE6;Q3T8J9;A4PB68 A0A087WUE6 337 350 GON4L GON-4-like protein yes no 2;3 0.00078621 85.862 By MS/MS By MS/MS 2 2 6900700 3987900 2912800 2177 46 2409 5433;5434;5435;5436 5033;5034;5035;5036 5036 76;6224 4 GVVQELQQAISK EVENQSLRGVVQELQQ ELQQAISKLEARLNVL R G V S K L 1 0 0 0 0 3 1 1 0 1 1 1 0 0 0 1 0 0 0 2 0 0 12 0 1298.7194 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PPR1;E9PL12;E9PN91;E9PMW7;H0YCK7;E9PIZ1 E9PL71 72 83 EEF1D Elongation factor 1-delta yes no 2 0.0067707 79.201 By MS/MS 1 1005300 1005300 0 2178 143 2410 5437 5037 5037 1 GWAFGSNSLPIAGSVGMGVAR MQNYRQQKGWAFGSNS SVGMGVARRTQRQFPM K G W A R R 3 1 1 0 0 0 0 5 0 1 1 0 1 1 1 3 0 1 0 2 0 0 21 0 2033.0153 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 550 570 SAMD4B Protein Smaug homolog 2 yes no 2;3 3.7414E-14 119.37 By MS/MS By MS/MS 3 2 56489000 45499000 10989000 2179 1308 2411;2412 5438;5439;5440;5441;5442 5038;5039;5040 5040 145 2344;2345 3 GWSRDQPGQAPMR SVDKSFSRGWSRDQPG QPGQAPMRQRSATTTG R G W M R Q 1 2 0 1 0 2 0 2 0 0 0 0 1 0 2 1 0 1 0 0 0 0 13 1 1484.6943 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 719 731 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 3 0.022458 49.423 By MS/MS By matching 1 1 5700900 2750300 2950600 2180 371 2413 5443;5444 5041 5041 1 GYDVIAQAQSGTGK RAILPCIKGYDVIAQA QAQSGTGKTATFAISI K G Y G K T 2 0 0 1 0 2 0 3 0 1 0 1 0 0 0 1 1 0 1 1 0 0 14 0 1393.6838 P60842;J3QKZ9;J3QLN6;J3KS25;J3QR64;J3KTB5;J3QL43;J3QS69;J3KT12;E7EQG2;Q14240;J3KT04;J3KS93;E7EMV8;J3KSN7 P60842 69 82 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.0014016 103.08 By MS/MS By MS/MS 1 1 4191100 1967600 2223500 2181 1786 2414 5445;5446 5042;5043 5043 2 GYGFVDFDSPSAAQK DKTTNKCKGYGFVDFD DSPSAAQKAVTALKAS K G Y Q K A 2 0 0 2 0 1 0 2 0 0 0 1 0 2 1 2 0 0 1 1 0 0 15 0 1587.7205 F8W1T6;Q15434 F8W1T6 98 112 RBMS2 RNA-binding motif, single-stranded-interacting protein 2 yes no 2 0.00053719 85.909 By MS/MS By MS/MS 1 1 2942400 1515900 1426600 2182 931 2415 5447;5448 5044;5045 5045 1669;1670 2 GYLGPEQLPDCLK IETKAAVKGYLGPEQL EQLPDCLKGCDVVVIP K G Y L K G 0 0 0 1 1 1 1 2 0 0 3 1 0 0 2 0 0 0 1 0 0 0 13 0 1488.7283 P40926 P40926 79 91 MDH2 Malate dehydrogenase, mitochondrial yes yes 2 0.0034663 90.149 By MS/MS By MS/MS 1 1 1235900 0 1235900 2183 1688 2416 5449;5450 5046;5047 5046 2 GYLPLPR APGHPLAKGYLPLPRG KGYLPLPRGAPVGKES K G Y P R G 0 1 0 0 0 0 0 1 0 0 2 0 0 0 2 0 0 0 1 0 0 0 7 0 814.47012 Q9Y5Y0 Q9Y5Y0 21 27 FLVCR1 Feline leukemia virus subgroup C receptor-related protein 1 yes yes 2 0.0060007 99.511 By MS/MS By MS/MS 1 1 7376500 4013600 3362900 2184 2941 2417 5451;5452 5048;5049;5050 5049 7961 3 GYMMMFPR RSPFEDSRGYMMMFPR GYMMMFPRVSPPPAPS R G Y P R V 0 1 0 0 0 0 0 1 0 0 0 0 3 1 1 0 0 0 1 0 0 0 8 0 1031.4391 O14654 O14654 742 749 IRS4 Insulin receptor substrate 4 yes yes 2 0.0018625 104.11 By MS/MS By MS/MS 4 4 30942000 18463000 12480000 2185 1343 2418;2419 5453;5454;5455;5456;5457;5458;5459;5460 5051;5052;5053;5054;5055;5056;5057;5058 5052 156;157;158 7504 7 GYNDDYYEESYFTTR DALLYQSKGYNDDYYE EESYFTTRTYGEPESA K G Y T R T 0 1 1 2 0 0 2 1 0 0 0 0 0 1 0 1 2 0 4 0 0 0 15 0 1921.7643 P50402;Q5HY57 P50402 89 103 EMD Emerin yes no 2;3 1.6076E-09 122.34 By MS/MS By MS/MS 3 4 48597000 24678000 23919000 2186 1738 2420 5461;5462;5463;5464;5465;5466;5467 5059;5060;5061;5062;5063;5064;5065;5066;5067 5065 3290;7633;7634;7635;7636 9 GYQMSTRLK GGETEKPRGYQMSTRL YQMSTRLKIVTIHQEP R G Y L K I 0 1 0 0 0 1 0 1 0 0 1 1 1 0 0 1 1 0 1 0 0 0 9 1 1082.5543 Q5VSF9;Q05586 Q5VSF9 412 420 GRIN1 Glutamate receptor ionotropic, NMDA 1 yes no 2 0.023022 40.268 By MS/MS 1 0 0 0 2187 1854 2421 5468 5068 5068 7666 1 GYSDEIYVVPDDSQNR IDTIFKQKGYSDEIYV VPDDSQNRIKIRNSFV K G Y N R I 0 1 1 3 0 1 1 1 0 1 0 0 0 0 1 2 0 0 2 2 0 0 16 0 1855.8224 Q13017;A0A0A0MSK6 Q13017 1103 1118 ARHGAP5 Rho GTPase-activating protein 5 yes no 2;3 1.5337E-84 205.07 By MS/MS By MS/MS 2 2 72267000 38760000 33507000 2188 1891 2422 5469;5470;5471;5472 5069;5070;5071 5069 7683 3 GYSFSLTTFSPSGK ________________ TTFSPSGKLVQIEYAL R G Y G K L 0 0 0 0 0 0 0 2 0 0 1 1 0 2 1 4 2 0 1 0 0 0 14 0 1477.7089 H3BT36;A0A024RA52;P25787 H3BT36 5 18 PSMA2 Proteasome subunit alpha type;Proteasome subunit alpha type-2 yes no 2 0.017656 57.794 By MS/MS 1 1362000 1362000 0 2189 3 2423 5473 5072 5072 3 1 GYSFTTTAER LMKILTERGYSFTTTA SFTTTAEREIVRDIKE R G Y E R E 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 1 3 0 1 0 0 0 10 0 1131.5197 P63261;P60709;I3L3I0;I3L1U9;I3L4N8 P63261 197 206 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2 7.264E-05 120.15 By MS/MS By MS/MS 1 1 28480000 14285000 14195000 2190 1785 2424 5474;5475 5073;5074 5074 2 GYTSDDDTWEPEIHLEDCK VLYKVRWKGYTSDDDT EIHLEDCKEVLLEFRK K G Y C K E 0 0 0 4 1 0 3 1 1 1 1 1 0 0 1 1 2 1 1 0 0 0 19 0 2308.943 Q99549 Q99549 82 100 MPHOSPH8 M-phase phosphoprotein 8 yes yes 2;3 3.99E-06 92.856 By MS/MS By MS/MS 2 2 51078000 26802000 24276000 2191 2551 2425 5476;5477;5478;5479 5075;5076;5077;5078 5076 5160;7022 4 GYTSDSEVYTDHGRPGK QNDVSLDRGYTSDSEV TDHGRPGKIHRSATDA R G Y G K I 0 1 0 2 0 0 1 3 1 0 0 1 0 0 1 2 2 0 2 1 0 0 17 1 1867.8337 Q92538 Q92538 1315 1331 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 3 0.00063883 73.296 By MS/MS By MS/MS 1 1 62474000 32759000 29714000 2192 2421 2426 5480;5481 5079;5080 5079 4868 2 GYTSDSEVYTDHGRPGKIHR QNDVSLDRGYTSDSEV GRPGKIHRSATDADVV R G Y H R S 0 2 0 2 0 0 1 3 2 1 0 1 0 0 1 2 2 0 2 1 0 0 20 2 2274.0778 Q92538 Q92538 1315 1334 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 4 0.020747 41.115 By MS/MS 1 4213900 0 4213900 2193 2421 2427 5482 5081 5081 4868 1 GYYSPGIVSTR HTNYLLMRGYYSPGIV SPGIVSTRNLNPNDSI R G Y T R N 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 2 1 0 2 1 0 0 11 0 1198.5982 Q12789 Q12789 1650 1660 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0036072 82.85 By MS/MS By MS/MS 1 1 18730000 8225800 10504000 2194 1876 2428 5483;5484 5082;5083 5082 3552 2 HALIIYDDLSK EYFRDNGKHALIIYDD IIYDDLSKQAVAYRQM K H A S K Q 1 0 0 2 0 0 0 0 1 2 2 1 0 0 0 1 0 0 1 0 0 0 11 0 1286.6871 P25705 P25705 306 316 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 4.1428E-07 145.72 By MS/MS 1 0 0 0 2195 1632 2429 5485 5084 5084 1 HALTSPSLGGQGR GIGGVSPRHALTSPSL PSLGGQGRQNLWFANP R H A G R Q 1 1 0 0 0 1 0 3 1 0 2 0 0 0 1 2 1 0 0 0 0 0 13 0 1279.6633 M0QZ22;Q5PRF9;M0QX45 M0QZ22 603 615 SAMD4B Protein Smaug homolog 2 yes no 2 2.0351E-10 136.93 By MS/MS By MS/MS 1 1 30122000 15284000 14838000 2196 1308 2430 5486;5487 5085;5086 5086 2346 2 HAPHCLSEEEGEQDRPR PRPASLLRHAPHCLSE EGEQDRPRAPGPWDPL R H A P R A 1 2 0 1 1 1 4 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 17 1 2045.8973 E9PH18;A0A0J9YX62;O75190 E9PH18 156 172 DNAJB6 DnaJ homolog subfamily B member 6 yes no 4 0.00958 52.009 By matching By MS/MS 1 1 35943000 9969900 25973000 2197 331 2431 5488;5489 5087 5087 618 1 HAPSPEPAVQGTGVAGVPEESGDAAAIPAKK SPSPARKRHAPSPEPA AAAIPAKKAPAGQEEP R H A K K A 7 0 0 1 0 1 3 4 1 1 0 2 0 0 5 2 1 0 0 3 0 0 31 1 2937.4832 P13051 P13051 20 50 UNG Uracil-DNA glycosylase yes yes 4 0.0035096 47.376 By MS/MS By matching 1 1 9084200 5114400 3969800 2198 1574 2432 5490;5491 5088 5088 2893 1 HAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPR SITQSNEKHAPTYTIP QVPPSLPRNSTMMQAV K H A P R N 4 1 0 0 0 1 1 0 1 1 4 0 0 0 9 3 4 0 1 2 0 0 32 0 3317.8024 Q9NPI6 Q9NPI6 306 337 DCP1A mRNA-decapping enzyme 1A yes yes 3 0.00021061 60.641 By MS/MS By MS/MS 2 2 118840000 101870000 16978000 2199 2706 2433;2434 5492;5493;5494;5495 5089;5090;5091 5089 5518;7058 3 HASAPSHVQPSDSEK QKSQPRRRHASAPSHV VQPSDSEKNRTMLFQV R H A E K N 2 0 0 1 0 1 1 0 2 0 0 1 0 0 2 4 0 0 0 1 0 0 15 0 1575.7277 O60343 O60343 339 353 TBC1D4 TBC1 domain family member 4 yes yes 3 0.00021437 88.78 By MS/MS By MS/MS 1 1 26460000 6586500 19873000 2200 1407 2435 5496;5497 5092;5093 5093 2591;2592 2 HASAPSHVQPSDSEKNR QKSQPRRRHASAPSHV PSDSEKNRTMLFQVGR R H A N R T 2 1 1 1 0 1 1 0 2 0 0 1 0 0 2 4 0 0 0 1 0 0 17 1 1845.8718 O60343 O60343 339 355 TBC1D4 TBC1 domain family member 4 yes yes 3;4 6.7171E-23 146.27 By MS/MS By MS/MS 2 1 61561000 44581000 16980000 2201 1407 2436 5498;5499;5500 5094;5095;5096 5096 2591;2592 3 HASLDGASPYFK QFLTRLRRHASLDGAS DGASPYFKVKKWKLEP R H A F K V 2 0 0 1 0 0 0 1 1 0 1 1 0 1 1 2 0 0 1 0 0 0 12 0 1291.6197 A0A140LJL2;Q8N350 A0A140LJL2 317 328 DOS Protein Dos yes no 2 0.0018925 92.112 By MS/MS 1 0 0 0 2202 356 2437 5501 5097 5097 664 1 HASPILPITEFSDIPR NRVTGNFKHASPILPI TEFSDIPRRAPKKPLT K H A P R R 1 1 0 1 0 0 1 0 1 3 1 0 0 1 3 2 1 0 0 0 0 0 16 0 1791.9519 G5E972;P42167;H0YJH7 G5E972 264 279 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2;3 6.5203E-29 157.09 By MS/MS By MS/MS 2 2 121960000 67483000 54480000 2203 990 2438 5502;5503;5504;5505 5098;5099;5100;5101;5102 5101 1811 5 HAYKDDSPR KERRPHKKHAYKDDSP AYKDDSPRRRSTSPDH K H A P R R 1 1 0 2 0 0 0 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 9 1 1087.5047 Q02040 Q02040 627 635 AKAP17A A-kinase anchor protein 17A yes yes 3 0.0032064 80.871 By MS/MS By MS/MS 1 1 16900000 4092800 12807000 2204 1837 2439 5506;5507 5103;5104 5103 3438 2 HCAPSPDRSPELSSSR ESDRPRKRHCAPSPDR SPELSSSRDRYNSDND R H C S R D 1 2 0 1 1 0 1 0 1 0 1 0 0 0 3 5 0 0 0 0 0 0 16 1 1781.8115 A0A087WWP4;Q96T37 A0A087WWP4 622 637 RBM15 Putative RNA-binding protein 15 yes no 2;3 0.0020726 83.966 By MS/MS By MS/MS 2 2 159580000 72401000 87180000 2205 81 2440 5508;5509;5510;5511 5105;5106;5107 5107 146;147 3 HDDGTQSDSENAGAHR LKRLKGNKHDDGTQSD SENAGAHRRCSKRATL K H D H R R 2 1 1 3 0 1 1 2 2 0 0 0 0 0 0 2 1 0 0 0 0 0 16 0 1695.6833 H0Y2V6;Q5SW79 H0Y2V6 275 290 CEP170 Centrosomal protein of 170 kDa yes no 3 0.0052529 58.01 By MS/MS By matching 1 1 6103200 3368700 2734500 2206 1006 2441 5512;5513 5108 5108 1836 1 HDSDTSPPRR PSPLRGARHDSDTSPP SDTSPPRRIRHDSSDT R H D R R I 0 2 0 2 0 0 0 0 1 0 0 0 0 0 2 2 1 0 0 0 0 0 10 1 1166.5428 Q9BRD0 Q9BRD0 170 179 BUD13 BUD13 homolog yes yes 3 0.024753 45.161 By MS/MS 1 392600 0 392600 2207 2571 2442 5514 5109 5109 0 HDSIPAADTFEDLSDVEGGGSEPTQR EDLRRSVKHDSIPAAD GGSEPTQRDAGSRDEK K H D Q R D 2 1 0 4 0 1 3 3 1 1 1 0 0 1 2 3 2 0 0 1 0 0 26 0 2729.2053 O95671 O95671 226 251 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 3 8.0996E-12 89.634 By MS/MS By MS/MS 1 1 78485000 43021000 35464000 2208 1494 2443 5515;5516 5110;5111 5111 2769 2 HDSPDLAPNVTYSLPR TQQLRRARHDSPDLAP NVTYSLPRTKSGKAPE R H D P R T 1 1 1 2 0 0 0 0 1 0 2 0 0 0 3 2 1 0 1 1 0 0 16 0 1780.8744 Q9BRD0;H7C462 Q9BRD0 269 284 BUD13 BUD13 homolog yes no 2;3 0.0038566 60.631 By MS/MS By MS/MS 2 2 7484800 3187600 4297200 2209 2571 2444 5517;5518;5519;5520 5112;5113 5113 5191 2 HDSPEDVKR CMMAQYNRHDSPEDVK DSPEDVKRRAMADPEV R H D K R R 0 1 0 2 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 9 1 1081.5152 H0YGI8;P31948 H0YGI8 78 86 STIP1 Stress-induced-phosphoprotein 1 yes no 3 0.0012454 88.155 By MS/MS By MS/MS 1 1 15178000 8772200 6405600 2210 1073 2445 5521;5522 5114;5115 5115 1984 2 HDTPDPSPLR DPSPRRARHDTPDPSP TPDPSPLRGARHDSDT R H D L R G 0 1 0 2 0 0 0 0 1 0 1 0 0 0 3 1 1 0 0 0 0 0 10 0 1133.5465 Q9BRD0 Q9BRD0 157 166 BUD13 BUD13 homolog yes yes 2 0.0041171 90.793 By MS/MS By MS/MS 1 1 17427000 10055000 7371700 2211 2571 2446 5523;5524 5116;5117 5117 5194;7026 2 HEEEEWTDDDLVESL DYVSKKSKHEEEEWTD DDDLVESL________ K H E S L - 0 0 0 3 0 0 5 0 1 0 2 0 0 0 0 1 1 1 0 1 0 0 15 0 1844.7588 D6RHI7;P51946 D6RHI7 235 249 CCNH Cyclin-H yes no 2 3.6129E-05 112.51 By MS/MS By matching 1 1 9291300 4962200 4329100 2212 681 2447 5525;5526 5118 5118 6398 1 HEEQQRELEEEEENSDEDELDSHTMVK AMEIKAKRHEEQQREL LDSHTMVKTSVESVGT R H E V K T 0 1 1 3 0 2 10 0 2 0 2 1 1 0 0 2 1 0 0 1 0 0 27 1 3313.3801 A0A087WZ06;Q13188;E5RFQ9 A0A087WZ06 191 217 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes no 4 0.017358 41.648 By matching By MS/MS 1 1 11715000 8272900 3442000 2213 103 2448 5527;5528 5119 5119 192 1 HELSPPQKR RERFSPPRHELSPPQK ELSPPQKRMRRDWDEH R H E K R M 0 1 0 0 0 1 1 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1090.5883 Q9BXP5;C9JUL9 Q9BXP5 71 79 SRRT Serrate RNA effector molecule homolog yes no 3 0.0097733 58.132 By MS/MS By MS/MS 1 1 12242000 5464600 6777300 2214 2599 2449 5529;5530 5120;5121 5121 5267 2 HEYALPLAPPEPEYATPIVER DCPQRAGRHEYALPLA YATPIVERHVLRAHTF R H E E R H 3 1 0 0 0 0 4 0 1 1 2 0 0 0 5 0 1 0 2 1 0 0 21 0 2391.2111 Q8N8Z6 Q8N8Z6 587 607 DCBLD1 Discoidin, CUB and LCCL domain-containing protein 1 yes yes 3 0.00023935 68.625 By MS/MS By MS/MS 1 1 8242500 3250000 4992400 2215 2327 2450 5531;5532 5122;5123 5122 6959;7802;7803 2 HFEASCGQLSPAR NKATKILRHFEASCGQ CGQLSPARGTSAEPGP R H F A R G 2 1 0 0 1 1 1 1 1 0 1 0 0 1 1 2 0 0 0 0 0 0 13 0 1458.6674 A0A1B0GV70;Q96N21 A0A1B0GV70 415 427 ENTHD2 AP-4 complex accessory subunit tepsin yes no 2 0.00057362 108.66 By MS/MS By matching 1 1 6471200 3611300 2860000 2216 377 2451 5533;5534 5124 5124 713 1 HFELGGDK MLAIKRCKHFELGGDK HFELGGDKKRKGQVIQ K H F D K K 0 0 0 1 0 0 1 2 1 0 1 1 0 1 0 0 0 0 0 0 0 0 8 0 901.42938 R4GN19;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881 R4GN19 9 16 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a yes no 2 0.012413 98.523 By MS/MS 1 1792100 0 1792100 2217 1025 2452 5535 5125 5125 1 HFHASQCPRPTSPVSTDSNMSAAVMQK MQDAAGRRHFHASQCP MSAAVMQKTRPAKKLK R H F Q K T 3 1 1 1 1 2 0 0 2 0 0 1 2 1 3 5 2 0 0 2 0 0 27 1 2970.3535 A0A0A0MSX4;Q9Y6N7;A0A087WZ85;A0A087WTM1 A0A0A0MSX4 1311 1337 ROBO1 Roundabout homolog 1 yes no 4 0.00091588 56.461 By MS/MS By MS/MS 1 1 8981500 5920800 3060700 2218 228 2453 5536;5537 5126;5127 5127 418 2 HFKDEDEDEDVASPDGLGR ARRNGQEKHFKDEDED ASPDGLGRLNVAGAGG K H F G R L 1 1 0 5 0 0 3 2 1 0 1 1 0 1 1 1 0 0 0 1 0 0 19 1 2129.9138 O95365 O95365 537 555 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 3 0.0031969 58.755 By matching By MS/MS 1 1 9092800 4648500 4444300 2219 1486 2454 5538;5539 5128 5128 2754 1 HFNYPSTPPSER DMNQGTSRHFNYPSTP PSTPPSERNGTSSTCQ R H F E R N 0 1 1 0 0 0 1 0 1 0 0 0 0 1 3 2 1 0 1 0 0 0 12 0 1430.6579 Q9BX63;J3QSE8 Q9BX63 107 118 BRIP1 Fanconi anemia group J protein yes no 2 4.9323E-09 136.38 By MS/MS By MS/MS 1 1 7770600 3684600 4086000 2220 2595 2455 5540;5541 5129;5130 5129 5254;7030 2 HFSQSEETGNEVFGALNEEQPLPR LPRSTRVRHFSQSEET NEEQPLPRSSSTSDIL R H F P R S 1 1 2 0 0 2 5 2 1 0 2 0 0 2 2 2 1 0 0 1 0 0 24 0 2714.2572 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 771 794 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 3 7.6917E-05 72.227 By MS/MS By MS/MS 1 1 30922000 15849000 15073000 2221 371 2456 5542;5543 5131;5132 5131 698 2 HFSTLKDDDLVEFSDLESEDDERPR PRVRKQTRHFSTLKDD SEDDERPRSRRHDRHH R H F P R S 0 2 0 6 0 0 4 0 1 0 3 1 0 2 1 3 1 0 0 1 0 0 25 2 2993.3527 Q9HCK8;H0YJG4 Q9HCK8 1407 1431 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes no 4 0.0076169 44.254 By MS/MS By MS/MS 1 2 16772000 4322400 12449000 2222 2694 2457;2458 5544;5545;5546 5133;5134 5134 5500;5501 2 HGAPAAPSPPPR PLVAPPRRHGAPAAPS AAPSPPPRGSRAGPVV R H G P R G 3 1 0 0 0 0 0 1 1 0 0 0 0 0 5 1 0 0 0 0 0 0 12 0 1153.5992 Q4KMP7 Q4KMP7 15 26 TBC1D10B TBC1 domain family member 10B yes yes 2;3 0.0015574 94.547 By MS/MS By MS/MS 2 2 10663000 5977300 4686100 2223 2047 2459 5547;5548;5549;5550 5135;5136;5137;5138;5139 5138 4007 5 HGESAWNLENR AYKLVLIRHGESAWNL SAWNLENRFSGWYDAD R H G N R F 1 1 2 0 0 0 2 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 11 0 1311.5956 P18669 P18669 11 21 PGAM1 Phosphoglycerate mutase 1 yes yes 2;3 0.00016474 136.83 By MS/MS By MS/MS 2 2 8375100 4112300 4262800 2224 1602 2460 5551;5552;5553;5554 5140;5141;5142;5143 5143 2954 4 HGGPGPGGPEPELSPITEGSEAR IISRLFHRHGGPGPGG ITEGSEARAGPPAPAP R H G A R A 1 1 0 0 0 0 4 6 1 1 1 0 0 0 5 2 1 0 0 0 0 0 23 0 2227.0505 Q8WUF5 Q8WUF5 554 576 PPP1R13L RelA-associated inhibitor yes yes 3 3.628E-20 119.37 By MS/MS By MS/MS 1 2 10258000 4487700 5770700 2225 2400 2461 5555;5556;5557 5144;5145 5144 4798 2 HGGSPQPLATTPLSQEPVNPPSEASPTR PTPLLAERHGGSPQPL PSEASPTRDRSPPKSP R H G T R D 2 1 1 0 0 2 2 2 1 0 2 0 0 0 7 4 3 0 0 1 0 0 28 0 2851.41 Q9UQ35;I3L182;I3L4D8 Q9UQ35 374 401 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0014561 52.427 By MS/MS By MS/MS 1 1 35581000 18217000 17364000 2226 2877 2462 5558;5559 5146;5147 5146 5950;5951;5952 2 HGGVCAPAAVATSPPGAIPK HGAEEECRHGGVCAPA SPPGAIPKEACGGAPL R H G P K E 5 0 0 0 1 0 0 3 1 1 0 1 0 0 4 1 1 0 0 2 0 0 20 0 1856.9567 Q9Y6A5 Q9Y6A5 238 257 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 3 3.3412E-05 80.738 By MS/MS By MS/MS 1 1 5491800 2941300 2550500 2227 2944 2463 5560;5561 5148;5149 5148 6114;7137 2 HGLAHDEMKSPR ISPSTFRKHGLAHDEM HDEMKSPREPGYKAEG K H G P R E 1 1 0 1 0 0 1 1 2 0 1 1 1 0 1 1 0 0 0 0 0 0 12 1 1376.6619 Q9Y2W1 Q9Y2W1 689 700 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 4 0.0035348 71.279 By matching By MS/MS 1 1 3414300 1183600 2230700 2228 2897 2464 5562;5563 5150 5150 6035 1 HGLLLPASPVR NSTTFPSRHGLLLPAS LLPASPVRMHSSRLHQ R H G V R M 1 1 0 0 0 0 0 1 1 0 3 0 0 0 2 1 0 0 0 1 0 0 11 0 1158.6873 Q96E09 Q96E09 69 79 FAM122A Protein FAM122A yes yes 2;3 5.6038E-06 127.17 By MS/MS By MS/MS 1 2 63538000 34844000 28694000 2229 2476 2465 5564;5565;5566 5151;5152;5153 5151 4987 3 HGLQLGAQSPGR LEKHVQVRHGLQLGAQ LGAQSPGRGTTLARGS R H G G R G 1 1 0 0 0 2 0 3 1 0 2 0 0 0 1 1 0 0 0 0 0 0 12 0 1219.6422 Q8N1G0;A6PVV7 Q8N1G0 1049 1060 ZNF687 Zinc finger protein 687 yes no 2;3 7.1309E-05 113.43 By MS/MS By MS/MS 2 2 57328000 31148000 26179000 2230 2298 2466 5567;5568;5569;5570 5154;5155;5156;5157 5156 4619 4 HGLQLGAQSPGRGTTLAR LEKHVQVRHGLQLGAQ GRGTTLARGSSARAQG R H G A R G 2 2 0 0 0 2 0 4 1 0 3 0 0 0 1 1 2 0 0 0 0 0 18 1 1818.9813 Q8N1G0;A6PVV7 Q8N1G0 1049 1066 ZNF687 Zinc finger protein 687 yes no 3 0.0001423 77.391 By MS/MS By MS/MS 1 1 35404000 19524000 15880000 2231 2298 2467 5571;5572 5158;5159 5159 4619;6955;6956 2 HGLTSGSASPPPPALPLYPDPVR PAPSSSPKHGLTSGSA PLYPDPVRLIRYSIKC K H G V R L 2 1 0 1 0 0 0 2 1 0 3 0 0 0 7 3 1 0 1 1 0 0 23 0 2325.2117 H0YM74;Q92610 H0YM74 683 705 ZNF592 Zinc finger protein 592 yes no 3 2.5866E-15 104.53 By MS/MS By MS/MS 1 1 8952300 4435600 4516600 2232 1097 2468 5573;5574 5160;5161 5161 2020 2 HGSASQVQKQR HCNSGRTRHGSASQVQ ASQVQKQRSAGSFKLA R H G Q R S 1 1 0 0 0 3 0 1 1 0 0 1 0 0 0 2 0 0 0 1 0 0 11 1 1224.6323 J3QSG6;H0Y465;P21359 J3QSG6 610 620 NF1 Neurofibromin;Neurofibromin truncated yes no 3 2.545E-06 127.51 By MS/MS By MS/MS 1 1 7611800 2656000 4955800 2233 1016 2469 5575;5576 5162;5163 5163 1877;1878 2 HGSFHEDEDPIGSPR TGGSPSVRHGSFHEDE EDPIGSPRLLSVKGSP R H G P R L 0 1 0 2 0 0 2 2 2 1 0 0 0 1 2 2 0 0 0 0 0 0 15 0 1678.7336 Q96T58 Q96T58 1266 1280 SPEN Msx2-interacting protein yes yes 3 9.5329E-07 118.48 By MS/MS By MS/MS 1 1 20783000 9016200 11767000 2234 2545 2470 5577;5578 5164;5165 5165 5144 2 HGSFNTVQASER CAKQKLARHGSFNTVQ NTVQASERIQRKVNSE R H G E R I 1 1 1 0 0 1 1 1 1 0 0 0 0 1 0 2 1 0 0 1 0 0 12 0 1331.6218 F8VSE7;Q96AV8 F8VSE7 408 419 E2F7 Transcription factor E2F7 yes no 2 0.0012926 98.368 By MS/MS By MS/MS 1 1 8746100 4729600 4016500 2235 916 2471 5579;5580 5166;5167 5166 1647 2 HGSFVNKPTR LGGEEWTRHGSFVNKP SFVNKPTRGWLHPNDK R H G T R G 0 1 1 0 0 0 0 1 1 0 0 1 0 1 1 1 1 0 0 1 0 0 10 1 1141.5992 P29353;Q5T181;Q5T182 P29353 137 146 SHC1 SHC-transforming protein 1 yes no 3 0.0067469 67.118 By MS/MS By MS/MS 1 1 14055000 6773300 7281200 2236 1645 2472 5581;5582 5168;5169 5168 3036 2 HGSGADSDYENTQSGDPLLGLEGKR RHTSKLSRHGSGADSD LLGLEGKRFLELGKEE R H G K R F 1 1 1 3 0 1 2 5 1 0 3 1 0 0 1 3 1 0 1 0 0 0 25 1 2602.1896 J3QRU8;Q9Y2X7;J3QL89;A0A0C4DGN6 J3QRU8 590 614 GIT1 ARF GTPase-activating protein GIT1 yes no 3 9.8457E-06 74.561 By MS/MS By MS/MS 4 4 84773000 48738000 36035000 2237 1258 2473;2474;2475 5583;5584;5585;5586;5587;5588;5589;5590 5170;5171;5172;5173;5174 5171 2278;2279;7480 5 HGSGPNIILTGDSSPGFSK QNLTHCSRHGSGPNII DSSPGFSKEIAAALAG R H G S K E 0 0 1 1 0 0 0 4 1 2 1 1 0 1 2 4 1 0 0 0 0 0 19 0 1869.9221 Q53ET0;Q5T4K5 Q53ET0 611 629 CRTC2 CREB-regulated transcription coactivator 2 yes no 2;3 0.00088281 69.525 By MS/MS By MS/MS 2 2 23749000 11223000 12526000 2238 2054 2476 5591;5592;5593;5594 5175;5176;5177 5176 4036;4037 3 HGSGPPSSGGGLYR DPNGTRVRHGSGPPSS SSGGGLYRDMGAQGGR R H G Y R D 0 1 0 0 0 0 0 5 1 0 1 0 0 0 2 3 0 0 1 0 0 0 14 0 1327.6269 Q9HC52 Q9HC52 309 322 CBX8 Chromobox protein homolog 8 yes yes 2 0.015454 58.626 By MS/MS By matching 1 1 17697000 9529800 8166800 2239 2691 2477 5595;5596 5178 5178 5487 1 HGSPEFCGILGER GGGFKPIKHGSPEFCG FCGILGERVDPAVPLE K H G E R V 0 1 0 0 1 0 2 3 1 1 1 0 0 1 1 1 0 0 0 0 0 0 13 0 1457.6721 Q15464 Q15464 386 398 SHB SH2 domain-containing adapter protein B yes yes 2 0.0040668 76.01 By matching By MS/MS 1 1 4449000 2581000 1867900 2240 1992 2478 5597;5598 5179;5180 5179 3888 2 HGSSDISSPR PSPPRRARHGSSDISS SSDISSPRRVHNNSPD R H G P R R 0 1 0 1 0 0 0 1 1 1 0 0 0 0 1 4 0 0 0 0 0 0 10 0 1041.4839 Q9BRD0 Q9BRD0 233 242 BUD13 BUD13 homolog yes yes 2 0.014211 63.32 By MS/MS 1 0 0 0 2241 2571 2479 5599 5181 5181 5195;5196 1 HGSVSADEAAR ________________ VSADEAARTAPFHLDL R H G A R T 3 1 0 1 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1098.5054 A0A1B0GU90;A0A1B0GW73;H3BNF1;A0A1B0GTV3;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;Q9NWW5 A0A1B0GU90 5 15 CLN6 Ceroid-lipofuscinosis neuronal protein 6 yes no 2 0.018178 63.76 By MS/MS By MS/MS 2 1 22147000 11165000 10982000 2242 334 2480 5600;5601;5602 5182;5183;5184 5183 625 3 HGSYEDAVHSGALND HPESKDDKHGSYEDAV VHSGALND________ K H G N D - 2 0 1 2 0 0 1 2 2 0 1 0 0 0 0 2 0 0 1 1 0 0 15 0 1570.6648 F5H282;E7EQR6;P17987 F5H282 318 332 TCP1 T-complex protein 1 subunit alpha yes no 2 0.00054865 85.473 By MS/MS By MS/MS 1 1 7233000 3291700 3941300 2243 724 2481 5603;5604 5185;5186 5185 1288 2 HGTDLWIDNMSSAVPNHSPEKK LGSAALARHGTDLWID PNHSPEKKDSDFFTEH R H G K K D 1 0 2 2 0 0 1 1 2 1 1 2 1 0 2 3 1 1 0 1 0 0 22 1 2462.1649 Q8N6H7;E9PIY6;H0YF45;E9PJT7;E9PK28;E9PN48 Q8N6H7 129 150 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 3 0.00037116 65.149 By MS/MS 1 4786900 4786900 0 2244 2321 2482 5605 5187 5187 4659 1 HIDRNYEPLK AFKPTSNRHIDRNYEP DRNYEPLKTQPKKYAK R H I L K T 0 1 1 1 0 0 1 0 1 1 1 1 0 0 1 0 0 0 1 0 0 0 10 1 1283.6622 Q12929 Q12929 520 529 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 3 0.0043922 70.056 By matching By MS/MS 1 1 4759500 2386000 2373500 2245 1886 2483 5606;5607 5188 5188 7680 1 HIDSSPYSPAYLSPPPESSWR SPLRRYTRHIDSSPYS PPPESSWRRTMAWGNF R H I W R R 1 1 0 1 0 0 1 0 1 1 1 0 0 0 5 6 0 1 2 0 0 0 21 0 2372.1073 Q53ET0;H0YDQ8 Q53ET0 124 144 CRTC2 CREB-regulated transcription coactivator 2 yes no 3 2.3352E-09 99.454 By MS/MS By MS/MS 1 1 8148100 4956300 3191700 2246 2054 2484 5608;5609 5189;5190 5189 4038;7738 2 HIISATSLSTSPTELGSR SWREGGGRHIISATSL SPTELGSRNSSTGDGA R H I S R N 1 1 0 0 0 0 1 1 1 2 2 0 0 0 1 5 3 0 0 0 0 0 18 0 1855.964 Q5JSZ5 Q5JSZ5 216 233 PRRC2B Protein PRRC2B yes yes 2;3 9.6564E-14 127.49 By MS/MS By MS/MS 2 2 65990000 31600000 34391000 2247 2074 2485 5610;5611;5612;5613 5191;5192;5193;5194 5191 4080;6870 4 HIKEEPLSEEEPCTSTAIASPEK KKKRGKKKHIKEEPLS TAIASPEKKKKKKKKR K H I E K K 2 0 0 0 1 0 6 0 1 2 1 2 0 0 3 3 2 0 0 0 0 0 23 1 2581.2218 Q9Y2X3 Q9Y2X3 495 517 NOP58 Nucleolar protein 58 yes yes 3 0.00045396 64.16 By MS/MS By MS/MS 2 2 203940000 133130000 70815000 2248 2899 2486;2487 5614;5615;5616;5617 5195;5196;5197 5195 6041;6042;6043;7124;7125 3 HIKEEPLSEEEPCTSTAIASPEKK KKKRGKKKHIKEEPLS AIASPEKKKKKKKKRE K H I K K K 2 0 0 0 1 0 6 0 1 2 1 3 0 0 3 3 2 0 0 0 0 0 24 2 2709.3167 Q9Y2X3 Q9Y2X3 495 518 NOP58 Nucleolar protein 58 yes yes 3;4 5.931E-27 128.71 By MS/MS By MS/MS 6 6 827090000 501340000 325750000 2249 2899 2488;2489 5618;5619;5620;5621;5622;5623;5624;5625;5626;5627;5628;5629 5198;5199;5200;5201;5202;5203;5204;5205;5206;5207 5198 6041;6042;6043;7124;7125 10 HIPTALPVSGTLSSSNPDLLQSHHR IVGLRQTKHIPTALPV DLLQSHHRILDFSATP K H I H R I 1 1 1 1 0 1 0 1 3 1 4 0 0 0 3 5 2 0 0 1 0 0 25 0 2663.378 Q9Y4G8 Q9Y4G8 571 595 RAPGEF2 Rap guanine nucleotide exchange factor 2 yes yes 4 0.0017275 50.858 By matching By MS/MS 1 1 4970300 1861600 3108800 2250 2920 2490 5630;5631 5208 5208 7130 1 HISLTLPATFR TPAPNLPRHISLTLPA LTLPATFRGRNSTRTD R H I F R G 1 1 0 0 0 0 0 0 1 1 2 0 0 1 1 1 2 0 0 0 0 0 11 0 1254.7085 Q9H7P6 Q9H7P6 222 232 MVB12B Multivesicular body subunit 12B yes yes 2 0.00077038 105.17 By matching By MS/MS 1 1 3333000 1980100 1352900 2251 2676 2491 5632;5633 5209 5209 5463 1 HIYYITGETK TRMKENQKHIYYITGE YYITGETKDQVANSAF K H I T K D 0 0 0 0 0 0 1 1 1 2 0 1 0 0 0 0 2 0 2 0 0 0 10 0 1223.6186 P07900;Q58FG0 P07900 490 499 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 2 0.0052414 84.615 By MS/MS 1 1772600 0 1772600 2252 1540 2492 5634 5210 5210 1 HKAAAYDISEDEED CSPANLSRHKAAAYDI DISEDEED________ R H K E D - 3 0 0 3 0 0 3 0 1 1 0 1 0 0 0 1 0 0 1 0 0 0 14 1 1591.6638 P49585 P49585 354 367 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 2;3 0.0017899 85.909 By MS/MS By MS/MS 2 2 188540000 100590000 87956000 2253 1725 2493 5635;5636;5637;5638 5211;5212;5213 5211 3234 3 HKMSPPPSGFGER LGPHGPSRHKMSPPPS PPSGFGERSSGGSGGG R H K E R S 0 1 0 0 0 0 1 2 1 0 0 1 1 1 3 2 0 0 0 0 0 0 13 1 1425.6823 A0A087WZ13;E9PAU2;K7EQG2 A0A087WZ13 614 626 RAVER1 yes no 3 0.0099232 58.098 By MS/MS By MS/MS 1 1 17913000 9917100 7996000 2254 104 2494 5639;5640 5214;5215 5215 196 2 HLAESESLLTSPPK EGVMHQVKHLAESESL SLLTSPPKACTNGSGS K H L P K A 1 0 0 0 0 0 2 0 1 0 3 1 0 0 2 3 1 0 0 0 0 0 14 0 1507.7882 Q14669 Q14669 932 945 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 0.00052924 92.295 By MS/MS 1 539840 0 539840 2255 1949 2495 5641 5216 5216 3761 0 HLDGEEDGSSDQSQASGTTGGR AKKARKVKHLDGEEDG ASGTTGGRRVSKARRR K H L G R R 1 1 0 3 0 2 2 5 1 0 1 0 0 0 0 4 2 0 0 0 0 0 22 0 2189.9057 Q5H907;Q5H909;Q9UNF1 Q5H907 144 165 MAGED2 Melanoma-associated antigen D2 yes no 3 4.5729E-11 107.03 By MS/MS 1 3702200 0 3702200 2256 2066 2496 5642 5217 5217 4055 1 HLDRSPESDRPR LPEESGGRHLDRSPES SPESDRPRKRHCAPSP R H L P R K 0 3 0 2 0 0 1 0 1 0 1 0 0 0 2 2 0 0 0 0 0 0 12 2 1463.7229 A0A087WWP4;Q96T37 A0A087WWP4 608 619 RBM15 Putative RNA-binding protein 15 yes no 3;4 0.0086133 65.956 By matching By MS/MS 1 2 77425000 1850000 75575000 2257 81 2497 5643;5644;5645 5218;5219 5219 148 2 HLEAADKGHSPAQKPK GTEFNKQKHLEAADKG HSPAQKPKTSSGTKPS K H L P K T 3 0 0 1 0 1 1 1 2 0 1 3 0 0 2 1 0 0 0 0 0 0 16 2 1712.8958 Q14966;A0A096LPH6;A0A096LPI0;A0A096LPB4 Q14966 596 611 ZNF638 Zinc finger protein 638 yes no 3;4 0.00071857 68.088 By MS/MS By MS/MS 2 2 108640000 22251000 86389000 2258 1961 2498 5646;5647;5648;5649 5220;5221;5222;5223 5222 3812 4 HLFSSTENLAAGSWKEPAEGGGLSSDR SPKGFRKKHLFSSTEN GGGLSSDRQLSESSTK K H L D R Q 3 1 1 1 0 0 3 4 1 0 3 1 0 1 1 5 1 1 0 0 0 0 27 1 2802.3209 Q6WKZ4;E7EX40 Q6WKZ4 353 379 RAB11FIP1 Rab11 family-interacting protein 1 no no 3 0.00064721 57.432 By MS/MS 1 26312000 26312000 0 2259 2175;752 2499 5650 5224 5224 1369;6433 1 HLLAPGPQDIYDVPPVR QDEYDIPRHLLAPGPQ IYDVPPVRGLLPSQYG R H L V R G 1 1 0 2 0 1 0 1 1 1 2 0 0 0 4 0 0 0 1 2 0 0 17 0 1886.005 P56945;H3BN62 P56945 239 255 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 3 7.8461E-06 100.43 By MS/MS By matching 1 1 3535000 2795400 739630 2260 1779 2500 5651;5652 5225 5225 7649 1 HLLSPVGR TEPGLASRHLLSPVGR HLLSPVGRRQVAGHT_ R H L G R R 0 1 0 0 0 0 0 1 1 0 2 0 0 0 1 1 0 0 0 1 0 0 8 0 877.51339 H7C0W5;H7C1Q6;H7BXF4;B1PBA3;Q9NXE4 H7C0W5 299 306 SMPD4 Sphingomyelin phosphodiesterase 4 yes no 2 0.0049962 114.97 By MS/MS By MS/MS 1 1 8053500 4430600 3622900 2261 470 2501 5653;5654 5226;5227 5226 896 2 HLNYLRNLAKSLDAEQDTTNPK TNRMTPEKHLNYLRNL EQDTTNPKPFWNMGEN K H L P K P 2 1 3 2 0 1 1 0 1 0 4 2 0 0 1 1 2 0 1 0 0 0 22 2 2540.2983 Q8IWB4 Q8IWB4 359 380 SPATA31A7 Spermatogenesis-associated protein 31A7 yes yes 3 0.031156 44.788 By MS/MS 1 0 0 0 2262 2267 2502 5655 5228 5228 1 HLPSPPLTQEVDLHSIAGPPVPPR PSPHGTRRHLPSPPLT AGPPVPPRQSTSQHIP R H L P R Q 1 1 0 1 0 1 1 1 2 1 3 0 0 0 7 2 1 0 0 2 0 0 24 0 2553.3704 G5E9C8;Q07889 G5E9C8 1257 1280 SOS1 Son of sevenless homolog 1 yes no 3 0.003471 51.029 By MS/MS By matching 1 1 7876800 3824600 4052200 2263 994 2503 5656;5657 5229 5229 1821 1 HLQLAIR KKTRIIPRHLQLAIRN RHLQLAIRNDEELNKL R H L I R N 1 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 7 0 849.51847 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;Q96QV6;P16104;C9J0D1;Q71UI9;P0C0S5;C9J386 C9J0D1 83 89 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX;H2AFV;H2AFZ Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A;Histone H2A type 1-A;Histone H2AX;Histone H2A.V;Histone H2A.Z no no 2 0.028085 93.593 By MS/MS By matching 1 1 17499000 6145600 11354000 2264 348;549 2504 5658;5659 5230 5230 1 HLQQGSESPMMIGELR PANENGDRHLQQGSES PMMIGELRSDLDDVDP R H L L R S 0 1 0 0 0 2 2 2 1 1 2 0 2 0 1 2 0 0 0 0 0 0 16 0 1811.8658 Q9UPU5 Q9UPU5 2597 2612 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 3 0.0007547 74.364 By MS/MS 1 1427400 1427400 0 2265 2871 2505 5660 5231 5231 5927 1 HLSLPAGQVVPK VELTPMKKHLSLPAGQ PAGQVVPKINSLSLIR K H L P K I 1 0 0 0 0 1 0 1 1 0 2 1 0 0 2 1 0 0 0 2 0 0 12 0 1244.7241 Q8IXS8 Q8IXS8 428 439 FAM126B Protein FAM126B yes yes 2 0.0092637 67.952 By MS/MS By MS/MS 1 1 6522300 3880400 2641900 2266 2281 2506 5661;5662 5232;5233 5233 4580 2 HLSPVITSSANYR H L Y R 1 1 1 0 0 0 0 0 1 1 1 0 0 0 1 3 1 0 1 1 0 0 13 0 1443.747 REV__H3BU82 yes no 2 0.012494 55.98 By MS/MS 1 18158000 18158000 0 + 2267 2975 2507 5663 5234 5234 6162;6163 1 HLSTPSSVSPEPQDSAK LQKARHPKHLSTPSSV PEPQDSAKLRQSGLAN K H L A K L 1 0 0 1 0 1 1 0 1 0 1 1 0 0 3 5 1 0 0 1 0 0 17 0 1765.8483 Q9NZN5;E9PMR6 Q9NZN5 629 645 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 3 1.4961E-07 113.23 By MS/MS By MS/MS 1 1 10390000 5798200 4592200 2268 2770 2508 5664;5665 5235;5236 5235 5685;5686 2 HLTPEPDIVASTK VAPAKPPRHLTPEPDI PDIVASTKKPVPARPP R H L T K K 1 0 0 1 0 0 1 0 1 1 1 1 0 0 2 1 2 0 0 1 0 0 13 0 1406.7405 Q5JSH3;H7BY83 Q5JSH3 217 229 WDR44 WD repeat-containing protein 44 yes no 3 0.0057866 68.283 By MS/MS 1 704690 704690 0 2269 2073 2509 5666 5237 5237 6869 1 HMLASFSNFK H M F K 1 0 1 0 0 0 0 0 1 0 1 1 1 2 0 2 0 0 0 0 0 0 10 0 1180.5699 REV__A6NN14 yes yes 2 0.015678 62.659 By matching By MS/MS 1 1 47148000 22475000 24673000 + 2270 2968 2510 5667;5668 5238 5238 6153;6154 1 HNGSLSPGLEAR QCPEPGLRHNGSLSPG LSPGLEARDPLEAREL R H N A R D 1 1 1 0 0 0 1 2 1 0 2 0 0 0 1 2 0 0 0 0 0 0 12 0 1236.6211 Q9C0C2 Q9C0C2 1380 1391 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 0.019892 52.372 By MS/MS 1 1268000 1268000 0 2271 2615 2511 5669 5239 5239 5299 1 HNQFLTLFCVK KENAMCEKHNQFLTLF FLTLFCVKDLEILCTQ K H N V K D 0 0 1 0 1 1 0 0 1 0 2 1 0 2 0 0 1 0 0 1 0 0 11 0 1405.7176 Q495X7 Q495X7 100 110 TRIM60 Tripartite motif-containing protein 60 yes yes 4 0.023791 38.75 By MS/MS By matching 1 1 3711900 3295900 415970 2272 2043 2512 5670;5671 5240 5240 1 HNSSDGFFNNGPLR RFGVSRRRHNSSDGFF FFNNGPLRTAGDSWHQ R H N L R T 0 1 3 1 0 0 0 2 1 0 1 0 0 2 1 2 0 0 0 0 0 0 14 0 1560.707 Q9HC44 Q9HC44 47 60 GPBP1L1 Vasculin-like protein 1 yes yes 2;3 0.00081206 99.927 By MS/MS By MS/MS 2 1 9473100 5763400 3709700 2273 2690 2513 5672;5673;5674 5241;5242;5243 5242 5485;5486 3 HNSWSSSSR QSKSFRRRHNSWSSSS NSWSSSSRHPNQATPK R H N S R H 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 5 0 1 0 0 0 0 9 0 1046.453 H3BQ37;H3BPW9;Q96F86 H3BQ37 159 167 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2 0.0022801 115.91 By MS/MS By MS/MS 2 3 21883000 8138700 13744000 2274 1126 2514 5675;5676;5677;5678;5679 5244;5245;5246 5244 2057 3 HPDIYAVPIK ARIEIAQKHPDIYAVP DIYAVPIKTHKPDPGT K H P I K T 1 0 0 1 0 0 0 0 1 2 0 1 0 0 2 0 0 0 1 1 0 0 10 0 1151.6339 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1173 1182 TJP2 Tight junction protein ZO-2 yes no 2 0.0014474 87.639 By MS/MS By MS/MS 1 1 7711500 4786900 2924600 2275 368 2515 5680;5681 5247;5248;5249 5247 7254 3 HPGGGDYEEL GGGAPGGRHPGGGDYE GGGDYEEL________ R H P E L - 0 0 0 1 0 0 2 3 1 0 1 0 0 0 1 0 0 0 1 0 0 0 10 0 1072.4462 H0Y4Z8;Q3YEC7 H0Y4Z8 721 730 RABL6 Rab-like protein 6 yes no 2 0.00042138 108.24 By MS/MS By MS/MS 1 1 29452000 16504000 12948000 2276 1021 2516 5682;5683 5250;5251;5252;5253 5251 7436 4 HPKGEEGSDDDETENGPKPK RKKKKRRRHPKGEEGS TENGPKPKKRRPPKAE R H P P K K 0 0 1 3 0 0 4 3 1 0 0 3 0 0 3 1 1 0 0 0 0 0 20 2 2164.9509 Q6PD62 Q6PD62 963 982 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 3 0.0031096 62.082 By MS/MS By MS/MS 1 1 20486000 13637000 6849200 2277 2159 2517 5684;5685 5254;5255 5255 4299 2 HPLLSSGGPQSPLR SSPVFTFRHPLLSSGG GGPQSPLRGSTGSLKS R H P L R G 0 1 0 0 0 1 0 2 1 0 3 0 0 0 3 3 0 0 0 0 0 0 14 0 1444.7787 Q9P1Y5 Q9P1Y5 358 371 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2;3 0.0021394 74.966 By MS/MS By MS/MS 2 2 10012000 5378600 4633800 2278 2778 2518 5686;5687;5688;5689 5256;5257;5258;5259 5259 5699;5700;5701 4 HPSSPSALR TAAARSARHPSSPSAL PSSPSALRSPADPIDL R H P L R S 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 3 0 0 0 0 0 0 9 0 950.49338 H0YAZ3;O60504;H0YB51 H0YAZ3 54 62 SORBS3 Vinexin yes no 2 0.021695 73.887 By MS/MS 1 0 0 0 2279 1052 2519 5690 5260 5260 1 HPYFYAPELLFFAK YLYEIARRHPYFYAPE PELLFFAKRYKAAFTE R H P A K R 2 0 0 0 0 0 1 0 1 0 2 1 0 3 2 0 0 0 2 0 0 0 14 0 1741.8868 CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;A0A0C4DGB6;H7C013 CON__P02768-1 170 183 ALB Serum albumin yes no 3 0.00057759 97.957 By MS/MS 1 2686800 0 2686800 + 2280 633 2520 5691 5261 5261 1 HQDGLPYIDDSPSSSPHLSSK DRAEEQRRHQDGLPYI SSPHLSSKGRGSRDAL R H Q S K G 0 0 0 3 0 1 0 1 2 1 2 1 0 0 3 6 0 0 1 0 0 0 21 0 2266.0502 P11274 P11274 449 469 BCR Breakpoint cluster region protein yes yes 3 7.4506E-07 84.948 By MS/MS By MS/MS 1 1 15856000 7735800 8120300 2281 1562 2521 5692;5693 5262;5263;5264 5262 2865 3 HQGVMVGMGQK PSIVGRPRHQGVMVGM VMVGMGQKDSYVGDEA R H Q Q K D 0 0 0 0 0 2 0 3 1 0 0 1 2 0 0 0 0 0 0 2 0 0 11 0 1170.5638 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;C9JTX5;C9JUM1;C9JZR7;Q562R1;P63267;P68133;P68032;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 40 50 ACTG1;ACTB;ACTBL2;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 2 0.010236 75.043 By MS/MS By matching 1 1 3885200 2072200 1813100 2282 1785;1799 2522 5694;5695 5265 5265 1 HQNSLPELEAAEAGAPGSGPVDLFR EFLRKKARHQNSLPEL SGPVDLFRELLEEGKG R H Q F R E 4 1 1 1 0 1 3 3 1 0 3 0 0 1 3 2 0 0 0 1 0 0 25 0 2561.251 Q96BZ8 Q96BZ8 56 80 LENG1 Leukocyte receptor cluster member 1 yes yes 3 0.0014165 55.634 By MS/MS By MS/MS 1 1 5751100 3170100 2581000 2283 2464 2523 5696;5697 5266;5267 5266 4963 2 HQPSTPDPFLKPR TTPPGTPRHQPSTPDP PDPFLKPRCPSLDNLA R H Q P R C 0 1 0 1 0 1 0 0 1 0 1 1 0 1 4 1 1 0 0 0 0 0 13 1 1518.7943 O14686 O14686 2236 2248 KMT2D Histone-lysine N-methyltransferase 2D yes yes 3 0.0054908 64.121 By matching By MS/MS 1 1 7573300 3566700 4006500 2284 1344 2524 5698;5699 5268 5268 2447;6592 1 HQQQLLASPGSSTVDNK RLHGQLQRHQQQLLAS GSSTVDNKMLDDLYED R H Q N K M 1 0 1 1 0 3 0 1 1 0 2 1 0 0 1 3 1 0 0 1 0 0 17 0 1808.9017 F2Z2X4;Q9C0E2 F2Z2X4 514 530 XPO4 Exportin-4 yes no 2;3 0.00096373 70.452 By MS/MS By MS/MS 2 2 16635000 9043500 7591900 2285 852 2525 5700;5701;5702;5703 5269;5270;5271 5271 1540 3 HRAEAPPLEREDSGTFSLGK ________________ SGTFSLGKMITAKPGK R H R G K M 2 2 0 1 0 0 3 2 1 0 2 1 0 1 2 2 1 0 0 0 0 0 20 2 2196.0923 G5E9Q4;O75569 G5E9Q4 6 25 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 4 0.018112 42.679 By MS/MS 1 53926000 0 53926000 2286 996 2526 5704 5272 5272 1824 1 HRGSEEDPLLSPVETWK SKTKRKGRHRGSEEDP LSPVETWKGGIDNPAI R H R W K G 0 1 0 1 0 0 3 1 1 0 2 1 0 0 2 2 1 1 0 1 0 0 17 1 1978.9749 Q13017;A0A0A0MSK6;H0YK04 Q13017 1192 1208 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 0.018066 49.662 By matching By MS/MS 1 1 2918500 1372200 1546300 2287 1891 2527 5705;5706 5273 5273 3609;3610 1 HRPSEADEEELAR EEEQRRPKHRPSEADE ADEEELARRREARKQE K H R A R R 2 2 0 1 0 0 4 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 13 1 1537.7121 O14617 O14617 655 667 AP3D1 AP-3 complex subunit delta-1 yes yes 3 4.4485E-29 174.72 By MS/MS By MS/MS 1 1 18842000 8821800 10021000 2288 1341 2528 5707;5708 5274;5275 5275 2430 2 HRPSPPATPPPK SASPPRRRHRPSPPAT PPATPPPKTRHSPTPQ R H R P K T 1 1 0 0 0 0 0 0 1 0 0 1 0 0 6 1 1 0 0 0 0 0 12 1 1280.699 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 394 405 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2;3 0.00014289 110.6 By MS/MS By MS/MS 2 2 81459000 39612000 41847000 2289 442;1311 2529 5709;5710;5711;5712 5276;5277;5278;5279;5280;5281;5282;5283;5284;5285 5283 836;6334 10 HRSEDCGGGPR AHPRFKRRHRSEDCGG EDCGGGPRSLSRGLPC R H R P R S 0 2 0 1 1 0 1 3 1 0 0 0 0 0 1 1 0 0 0 0 0 0 11 1 1226.5211 Q9UGU0;A9JX13 Q9UGU0 1790 1800 TCF20 Transcription factor 20 yes no 3 0.006936 65.895 By MS/MS By MS/MS 1 1 5938800 2110600 3828200 2290 2810 2530 5713;5714 5286;5287 5286 5760 2 HSEEAEFTPPLKCSPK KKKKKKRKHSEEAEFT PPLKCSPKRKGKSNFL K H S P K R 1 0 0 0 1 0 3 0 1 0 1 2 0 1 3 2 1 0 0 0 0 0 16 1 1855.8774 Q3B726 Q3B726 315 330 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 3 0.020911 58.824 By MS/MS By matching 1 1 7111500 3692800 3418800 2291 2035 2531 5715;5716 5288 5288 3977;3978 0 HSEKSPPSTENKHEAK SRKLLNAKHSEKSPPS TENKHEAKRRRTERVR K H S A K R 1 0 1 0 0 0 3 0 2 0 0 3 0 0 2 3 1 0 0 0 0 0 16 2 1804.8704 H3BQL3;Q6PH81 H3BQL3 51 66 C16orf87 UPF0547 protein C16orf87 yes no 4 0.0021677 60.657 By matching By MS/MS 1 1 2945100 553880 2391200 2292 1130 2532 5717;5718 5289 5289 2063 1 HSGGFLSSPADFSQENKAPFEAVKR TFSNVFGRHSGGFLSS APFEAVKRFSLDERSL R H S K R F 3 1 1 1 0 1 2 2 1 0 1 2 0 3 2 4 0 0 0 1 0 0 25 2 2705.3198 Q7LBC6 Q7LBC6 772 796 KDM3B Lysine-specific demethylase 3B yes yes 4 0.0013634 52.522 By MS/MS By MS/MS 1 1 8731600 2119500 6612100 2293 2204 2533 5719;5720 5290;5291 5291 4391;4392 2 HSHSPASSPKPLKK RSPEASPKHSHSPASS SSPKPLKKQNPSSGAR K H S K K Q 1 0 0 0 0 0 0 0 2 0 1 3 0 0 3 4 0 0 0 0 0 0 14 2 1499.8209 Q9HDC5 Q9HDC5 472 485 JPH1 Junctophilin-1 yes yes 3 0.012737 60.158 By matching By MS/MS 1 1 7697900 1092100 6605800 2294 2700 2534 5721;5722 5292 5292 5508;5509 1 HSLDSDEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR PGSRFKGKHSLDSDEE LPSEGGVRITPFNLQE K H S V R I 3 1 0 8 0 1 7 5 1 1 3 1 0 0 1 6 1 0 1 2 0 0 42 1 4422.8855 O95400 O95400 45 86 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 4 0.0022154 41.514 By MS/MS 1 14203000 0 14203000 2295 1488 2535 5723 5293 5293 2758 1 HSLEEGLDMVNR NSTTIMSRHSLEEGLD EGLDMVNRETAHEREM R H S N R E 0 1 1 1 0 0 2 1 1 0 2 0 1 0 0 1 0 0 0 1 0 0 12 0 1398.6562 Q7Z309 Q7Z309 57 68 FAM122B Protein FAM122B yes yes 2 0.004149 77.078 By matching By MS/MS 1 1 4730300 2791100 1939200 2296 2208 2536 5724;5725 5294;5295 5295 4404 2 HSLLLSSSPNRIPSSR NSTTIMSRHSLLLSSS PNRIPSSRLHQIKREE R H S S R L 0 2 1 0 0 0 0 0 1 1 3 0 0 0 2 6 0 0 0 0 0 0 16 1 1749.9486 G1UD79 G1UD79 57 72 SPACIA2 yes yes 3 0.016108 48.883 By MS/MS By matching 1 1 15152000 9029100 6123300 2297 956 2537 5726;5727 5296 5296 1731;1732;1733 1 HSMGPGGYGDNLGGGQMYSPR ASQVESLRHSMGPGGY GGQMYSPREMRANGSW R H S P R E 0 1 1 1 0 1 0 7 1 0 1 0 2 0 2 2 0 0 2 0 0 0 21 0 2136.9106 P40425 P40425 377 397 PBX2 Pre-B-cell leukemia transcription factor 2 yes yes 3 1.3292E-08 90.836 By matching By MS/MS 1 1 13162000 7079600 6082000 2298 1686 2538 5728;5729 5297 5297 3099 1 HSPIAPSSPSPQVLAQK RTDSQSVRHSPIAPSS SPQVLAQKYSLVAKQE R H S Q K Y 2 0 0 0 0 2 0 0 1 1 1 1 0 0 4 4 0 0 0 1 0 0 17 0 1742.9315 Q9NQS7 Q9NQS7 305 321 INCENP Inner centromere protein yes yes 2;3 1.2226E-07 114.56 By MS/MS By MS/MS 2 2 34869000 20376000 14494000 2299 2712 2539 5730;5731;5732;5733 5298;5299;5300;5301 5301 5528;5529;5530;5531 4 HSQQLFPDGSPGDQWVK KLSRTKFRHSQQLFPD SPGDQWVKHRQPLQQK R H S V K H 0 0 0 2 0 3 0 2 1 0 1 1 0 1 2 2 0 1 0 1 0 0 17 0 1924.9068 H0Y9T5;Q8IU60 H0Y9T5 257 273 DCP2 m7GpppN-mRNA hydrolase yes no 3 4.7111E-05 84.166 By MS/MS By MS/MS 1 1 4671100 2334000 2337100 2300 1046 2540 5734;5735 5302;5303;5304 5303 1943 3 HSSDINHLVTQGRESPEGSYTDDANQEVR TGGRGDRRHSSDINHL DDANQEVRGPPQQHGH R H S V R G 1 2 2 3 0 2 3 2 2 1 1 0 0 0 1 4 2 0 1 2 0 0 29 1 3240.4668 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 333 361 FNBP1L Formin-binding protein 1-like yes no 4 0.00078021 54.441 By MS/MS By matching 1 1 17246000 7892200 9353500 2301 7 2541 5736;5737 5305 5305 16;17;18;6218 1 HSSISPSTLTLK RLSRSRSRHSSISPST SPSTLTLKSSLAAELN R H S L K S 0 0 0 0 0 0 0 0 1 1 2 1 0 0 1 4 2 0 0 0 0 0 12 0 1269.6929 Q14004 Q14004 435 446 CDK13 Cyclin-dependent kinase 13 yes yes 2 0.00047329 106.29 By MS/MS By MS/MS 1 1 7399600 4179100 3220500 2302 1936 2542 5738;5739 5306;5307 5306 3733;3734 2 HSSISPVRLPLNSSLGAELSR KRSSSRSRHSSISPVR SLGAELSRKKKERAAA R H S S R K 1 2 1 0 0 0 1 1 1 1 4 0 0 0 2 6 0 0 0 1 0 0 21 1 2219.2022 J3QSD7;Q9NYV4 J3QSD7 380 400 CDK12 Cyclin-dependent kinase 12 yes no 3;4 0.009571 50.404 By MS/MS By MS/MS 3 2 153290000 101670000 51624000 2303 1260 2543;2544 5740;5741;5742;5743;5744 5308;5309;5310 5310 2283;2284;2285;2286 3 HSSLKNRLDSPQIR GSLNSISRHSSLKNRL RLDSPQIRKTATAGRS R H S I R K 0 2 1 1 0 1 0 0 1 1 2 1 0 0 1 3 0 0 0 0 0 0 14 2 1649.8962 B7ZM87;A2RUF3;O75044;A0A075B7E9 B7ZM87 906 919 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes no 4 0.021499 42.317 By MS/MS 1 1815100 0 1815100 2304 402 2545 5745 5311 5311 1 HSSNPPLESHVGWVMDSR MPRKRKTRHSSNPPLE VGWVMDSREHRPRTAS R H S S R E 0 1 1 1 0 0 1 1 2 0 1 0 1 0 2 4 0 1 0 2 0 0 18 0 2033.9378 Q6PKG0;H0YC33;H0YBR8 Q6PKG0 822 839 LARP1 La-related protein 1 yes no 3 2.0347E-07 110.34 By MS/MS By MS/MS 2 2 18704000 8099000 10605000 2305 2162 2546;2547 5746;5747;5748;5749 5312;5313 5312 292 4304 2 HSSPTEERDEPAYPR LQFRSLSRHSSPTEER RDEPAYPRGDSSGSTR R H S P R G 1 2 0 1 0 0 3 0 1 0 0 0 0 0 3 2 1 0 1 0 0 0 15 1 1769.7969 F5H4R1;J3KNB8;F5H538;Q9Y6R4 F5H4R1 1250 1264 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 yes no 3 0.0042382 61.423 By MS/MS By matching 1 1 10626000 5940500 4685700 2306 886 2548 5750;5751 5314 5314 1594 1 HSSYPAGTEDDEGMGEEPSPFR GAVEIRSRHSSYPAGT GEEPSPFRGRSRSAPP R H S F R G 1 1 0 2 0 0 4 3 1 0 0 0 1 1 3 3 1 0 1 0 0 0 22 0 2393.9706 Q92934 Q92934 73 94 BAD Bcl2-associated agonist of cell death yes yes 3 0.022566 41.136 By MS/MS By matching 1 1 11389000 6682900 4706200 2307 2449 2549 5752;5753 5315 5315 1 HSTPSNSSNPSGPPSPNSPHR EPDSDSTKHSTPSNSS PSPNSPHRSQLPLEGL K H S H R S 0 1 3 0 0 0 0 1 2 0 0 0 0 0 6 7 1 0 0 0 0 0 21 0 2139.9682 Q9Y5S2 Q9Y5S2 1676 1696 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 3 0.0055164 51.611 By matching By MS/MS 1 1 4808800 2216400 2592400 2308 2934 2550 5754;5755 5316 5316 6098 1 HSTPSPTR RNADSEIKHSTPSPTR HSTPSPTRYSLSPSKS K H S T R Y 0 1 0 0 0 0 0 0 1 0 0 0 0 0 2 2 2 0 0 0 0 0 8 0 881.43553 P49792 P49792 777 784 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.0019626 153.97 By MS/MS By MS/MS 1 1 27753000 14630000 13123000 2309 1730 2551 5756;5757 5317;5318 5317 3263 2 HSTSGTDEGEDGDEPDDGSNDVVDLLPR APTRGISKHSTSGTDE DVVDLLPRTEISDKIT K H S P R T 0 1 1 7 0 0 3 4 1 0 2 0 0 0 2 3 2 0 0 2 0 0 28 0 2927.2177 Q14008 Q14008 827 854 CKAP5 Cytoskeleton-associated protein 5 yes yes 3 0.0037984 49.001 By MS/MS 1 6430200 0 6430200 2310 1937 2552 5758 5319 5319 3739 1 HTDDEMTGYVATR ILDFGLARHTDDEMTG MTGYVATRWYRAPEIM R H T T R W 1 1 0 2 0 0 1 1 1 0 0 0 1 0 0 0 3 0 1 1 0 0 13 0 1494.6409 E7EX54;B4E0K5;Q16539 E7EX54 97 109 MAPK14 Mitogen-activated protein kinase 14 yes no 2;3 1.199E-21 169.76 By MS/MS By MS/MS 2 3 336430000 186620000 149810000 2311 498 2553;2554 5759;5760;5761;5762;5763 5320;5321;5322;5323;5324 5321 55 6354;7295 5 HTFSGVASVESSSGEAFHVGK HRAHYDLRHTFSGVAS GEAFHVGKTPIVGQPS R H T G K T 2 0 0 0 0 0 2 3 2 0 0 1 0 2 0 5 1 0 0 3 0 0 21 0 2118.997 CON__P12763 CON__P12763 313 333 yes yes 3 7.2156E-19 122.68 By MS/MS By MS/MS 3 3 47673000 24600000 23074000 + 2312 634 2555;2556 5764;5765;5766;5767;5768;5769 5325;5326;5327;5328;5329;5330 5326 1152;1153;1154 6 HTGPNSPDTANDGFVR VEMDWVLKHTGPNSPD TANDGFVRLRGLPFGC K H T V R L 1 1 2 2 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 16 0 1683.7601 E9PCY7;G8JLB6;P55795;P31943;E5RGH4;E5RGV0;D6RIU0;D6RBM0;E7EQJ0;D6RAM1;H0YAQ2;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9 E9PCY7 99 114 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 3 8.0929E-08 120.15 By MS/MS By MS/MS 1 1 291060000 125140000 165920000 2313 767 2557 5770;5771 5331;5332 5332 1390 2 HTTFEQPVFSVSKQSPPISTSK RKVNTEQKHTTFEQPV SPPISTSKWFDPKSIC K H T S K W 0 0 0 0 0 2 1 0 1 1 0 2 0 2 3 5 3 0 0 2 0 0 22 1 2431.2383 P33981 P33981 422 443 TTK Dual specificity protein kinase TTK yes yes 3 0.0023258 56.428 By MS/MS By matching 1 1 17490000 8728000 8761900 2314 1667 2558 5772;5773 5333 5333 3066 1 HVDSLSQRSPK KNSEPSARHVDSLSQR SLSQRSPKASLRRVEL R H V P K A 0 1 0 1 0 1 0 0 1 0 1 1 0 0 1 3 0 0 0 1 0 0 11 1 1252.6524 K7EJV0;K7EPY1;K7ENL0;Q9UHD8 K7EJV0 62 72 SEPT9 Septin-9 yes no 2 0.0016735 100.04 By MS/MS By MS/MS 1 1 7195800 3399300 3796500 2315 1271 2559 5774;5775 5334;5335 5335 2304;2305 0 HVDSLSQRSPKASLR KNSEPSARHVDSLSQR RSPKASLRRVELSGPK R H V L R R 1 2 0 1 0 1 0 0 1 0 2 1 0 0 1 4 0 0 0 1 0 0 15 2 1679.9067 K7EJV0;K7EPY1;K7ENL0;Q9UHD8 K7EJV0 62 76 SEPT9 Septin-9 yes no 4 0.00089196 67.019 By MS/MS By MS/MS 1 1 19946000 6344900 13601000 2316 1271 2560 5776;5777 5336;5337 5336 2304;2305 2 HVFGESDELIGQK VLGHSERRHVFGESDE SDELIGQKVAHALAEG R H V Q K V 0 0 0 1 0 1 2 2 1 1 1 1 0 1 0 1 0 0 0 1 0 0 13 0 1457.7151 P60174;U3KQF3;U3KPZ0;U3KPS5 P60174 138 150 TPI1 Triosephosphate isomerase yes no 3 1.0171E-10 107.34 By MS/MS By MS/MS 1 1 4340100 2853000 1487000 2317 1781 2561 5778;5779 5338;5339 5339 2 HVLQTAVADSPR TKEAEFQRHVLQTAVA TAVADSPRDTASLFSD R H V P R D 2 1 0 1 0 1 0 0 1 0 1 0 0 0 1 1 1 0 0 2 0 0 12 0 1292.6837 Q7Z2Z1 Q7Z2Z1 432 443 TICRR Treslin yes yes 2 0.002498 88.163 By MS/MS By MS/MS 1 1 7949700 3036700 4913000 2318 2207 2562 5780;5781 5340;5341;5342 5342 4398 3 HVSGITLLSPK PSSKSSKKHVSGITLL GITLLSPKHKYKSGIK K H V P K H 0 0 0 0 0 0 0 1 1 1 2 1 0 0 1 2 1 0 0 1 0 0 11 0 1150.671 Q9P2B7 Q9P2B7 210 220 CFAP97 Cilia- and flagella-associated protein 97 yes yes 2 0.016213 64.945 By MS/MS By MS/MS 1 1 4854300 2708600 2145800 2319 2787 2563 5782;5783 5343;5344 5343 5723 2 HVSISYDIPPTPGNTYQIPR SSVETQMRHVSISYDI GNTYQIPRTFPEGTLG R H V P R T 0 1 1 1 0 1 0 1 1 3 0 0 0 0 4 2 2 0 2 1 0 0 20 0 2254.1382 B7Z3B9;Q13480 B7Z3B9 199 218 GAB1 GRB2-associated-binding protein 1 yes no 3 0.0012612 68.129 By MS/MS By MS/MS 2 1 0 0 0 2320 513 2564 5784;5785;5786 5345;5346;5347 5347 951;952;6359 3 HVSPVTPPREVPIYANR RQPGSVPRHVSPVTPP EVPIYANRFAVPTYAA R H V N R F 1 2 1 0 0 0 1 0 1 1 0 0 0 0 4 1 1 0 1 3 0 0 17 1 1931.0377 Q13443 Q13443 756 772 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes yes 3 0.030017 44.252 By MS/MS By matching 1 1 21451000 13261000 8189900 2321 1917 2565 5787;5788 5348 5348 7686 1 HVSSTSSSFLEV RSREKIQKHVSSTSSS TSSSFLEV________ K H V E V - 0 0 0 0 0 0 1 0 1 0 1 0 0 1 0 5 1 0 0 2 0 0 12 0 1278.6092 B4E2Q0;P98194 B4E2Q0 942 953 ATP2C1 Calcium-transporting ATPase;Calcium-transporting ATPase type 2C member 1 yes no 2 0.020488 71.555 By MS/MS 1 0 0 0 2322 499 2566 5789 5349 5349 936 1 HVTLPSSPR LRPRNKRRHVTLPSSP VTLPSSPRSNTPMGDK R H V P R S 0 1 0 0 0 0 0 0 1 0 1 0 0 0 2 2 1 0 0 1 0 0 9 0 992.54033 Q5T4S7;X6RE05;A0A0A0MSW0 Q5T4S7 2713 2721 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 2 0.0017215 123.11 By MS/MS By MS/MS 1 1 60403000 31814000 28589000 2323 2096 2567 5790;5791 5350;5351 5350 4144;4145 2 HVTQSGCNRK HKSGRDQRHVTQSGCN TQSGCNRKFKCTECGK R H V R K F 0 1 1 0 1 1 0 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 10 1 1185.5673 H0YMD3;H0YND9;P37275;H0YMN2;F6TDF5 H0YMD3 12 21 ZEB1 Zinc finger E-box-binding homeobox 1 yes no 2 0.017167 47.971 By MS/MS 1 0 0 0 2324 1099 2568 5792 5352 5352 2021 1 HWVAPGGPYSAETPGVPSPIAALK TTEEQQQRHWVAPGGP PSPIAALKNVAEALGH R H W L K N 4 0 0 0 0 0 1 3 1 1 1 1 0 0 5 2 1 1 1 2 0 0 24 0 2401.243 Q8IU81 Q8IU81 404 427 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 3 0.018903 41.818 By MS/MS By matching 1 1 11742000 8377300 3364300 2325 2260 2569 5793;5794 5353 5353 4537 1 HYEDGYPGGSDNYGSLSR YPPDGYSRHYEDGYPG DNYGSLSRVTRIEERY R H Y S R V 0 1 1 2 0 0 1 4 1 0 1 0 0 0 1 3 0 0 3 0 0 0 18 0 1972.8187 C9JZR2;O60716;E9PRE2 C9JZR2 216 233 CTNND1 Catenin delta-1 yes no 2;3 1.9587E-57 181.81 By MS/MS By MS/MS 3 2 235210000 126060000 109150000 2326 624 2570;2571 5795;5796;5797;5798;5799 5354;5355;5356;5357 5355 1131;1132;7333 4 HYEDGYPGGSDNYGSLSRVTR YPPDGYSRHYEDGYPG GSLSRVTRIEERYRPS R H Y T R I 0 2 1 2 0 0 1 4 1 0 1 0 0 0 1 3 1 0 3 1 0 0 21 1 2329.036 C9JZR2;O60716;E9PRE2 C9JZR2 216 236 CTNND1 Catenin delta-1 yes no 3 0.0059694 50.957 By matching By MS/MS 1 1 6625100 3691200 2933800 2327 624 2572 5800;5801 5358 5358 1131;1132;7333 1 HYGITSPISLAAPK QQTQPPQKHYGITSPI PISLAAPKETDCVLTQ K H Y P K E 2 0 0 0 0 0 0 1 1 2 1 1 0 0 2 2 1 0 1 0 0 0 14 0 1453.7929 G3V457;G3V3I9;A0A0C4DGK1;G3XAH6;P51003 G3V457 19 32 PAPOLA Poly(A) polymerase alpha yes no 2 4.5006E-12 131.08 By MS/MS By MS/MS 1 1 16295000 8511700 7783800 2328 294 2573 5802;5803 5359;5360;5361 5360 525 3 HYNWAVAAPMILSLQAFQKNLPK ________________ AFQKNLPKRSAQKEKT K H Y P K R 4 0 2 0 0 2 0 0 1 1 3 2 1 1 2 1 0 1 1 1 0 0 23 1 2639.4046 H0Y5E1;Q9BQK8 H0Y5E1 8 30 LPIN3 Phosphatidate phosphatase LPIN3 yes no 3 0.011329 43.696 By MS/MS By matching 1 1 13181000 7124500 6056100 2329 1026 2574 5804;5805 5362 5362 124 1903 1 HYYIAAEEIIWNYAPSGIDIFTK NIRGKHVRHYYIAAEE SGIDIFTKENLTAPGS R H Y T K E 3 0 1 1 0 0 2 1 1 5 0 1 0 1 1 1 1 1 3 0 0 0 23 0 2713.3428 E9PFZ2;P00450;H7C5R1 E9PFZ2 373 395 CP Ceruloplasmin yes no 3 4.3112E-09 87.062 By matching By MS/MS 1 1 14822000 6512900 8308700 2330 787 2575 5806;5807 5363 5363 1 IAAAILNTPDLR NPPLNGARIAAAILNT ILNTPDLRKQWLQEVK R I A L R K 3 1 1 1 0 0 0 0 0 2 2 0 0 0 1 0 1 0 0 0 0 0 12 0 1266.7296 P00505 P00505 326 337 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 1.0546E-08 132.01 By MS/MS By MS/MS 1 1 2921400 1527100 1394400 2331 1511 2576 5808;5809 5364;5365 5365 2 IAAPELHKGDSDSEEDEPTK KKRKEPVKIAAPELHK SEEDEPTKKKTILQGS K I A T K K 2 0 0 3 0 0 4 1 1 1 1 2 0 0 2 2 1 0 0 0 0 0 20 1 2166.9917 Q92733 Q92733 147 166 PRCC Proline-rich protein PRCC yes yes 3 0.0019667 65.905 By MS/MS By MS/MS 1 1 96898000 51413000 45486000 2332 2435 2577 5810;5811 5366;5367;5368 5367 4897;4898 3 IAASSSFR FPCTTAPKIAASSSFR IAASSSFRSSDKPIRT K I A F R S 2 1 0 0 0 0 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 8 0 837.43447 Q99961 Q99961 283 290 SH3GL1 Endophilin-A2 yes yes 2 0.0061417 135.43 By MS/MS By matching 1 1 129540000 128900000 644010 2333 2564 2578 5812;5813 5369;5370 5370 5175 2 IACDEEFSDSEDEGEGGRR SIRASDKRIACDEEFS DEGEGGRRNVADHKKG R I A R R N 1 2 0 3 1 0 5 3 0 1 0 0 0 1 0 2 0 0 0 0 0 0 19 1 2156.8553 Q92769 Q92769 415 433 HDAC2 Histone deacetylase 2 yes yes 2 0.0047524 68.515 By MS/MS 1 15882000 15882000 0 2334 2436 2579 5814 5371 5371 4902 1 IACKSPPPESMDTPTSTR TTDDKTTKIACKSPPP MDTPTSTRRRPKTPLG K I A T R R 1 1 0 1 1 0 1 0 0 1 0 1 1 0 4 3 3 0 0 0 0 0 18 1 1973.9187 P46013 P46013 2101 2118 MKI67 Antigen KI-67 yes yes 3 2.0062E-20 137.23 By MS/MS By MS/MS 1 1 30402000 19415000 10987000 2335 1704 2580 5815;5816 5372;5373;5374 5372 3141 3 IACKSPPPESVDTPTSTK MTDEKTTKIACKSPPP VDTPTSTKQWPKRSLR K I A T K Q 1 0 0 1 1 0 1 0 0 1 0 2 0 0 4 3 3 0 0 1 0 0 18 1 1913.9404 P46013 P46013 1127 1144 MKI67 Antigen KI-67 yes yes 2;3 3.0613E-09 113.71 By MS/MS By MS/MS 2 2 73900000 40693000 33207000 2336 1704 2581 5817;5818;5819;5820 5375;5376;5377 5377 3142 3 IACKSPQPDPVDTPASTK TTDEKTTKIACKSPQP VDTPASTKQRPKRNLR K I A T K Q 2 0 0 2 1 1 0 0 0 1 0 2 0 0 4 2 2 0 0 1 0 0 18 1 1910.9408 P46013 P46013 2340 2357 MKI67 Antigen KI-67 yes yes 2 0.00016992 82.01 By MS/MS By MS/MS 1 1 15445000 7420700 8023900 2337 1704 2582 5821;5822 5378;5379;5380 5378 3143 3 IACRSPQPDPVGTPTIFKPQSK TTHEKTTKIACRSPQP TIFKPQSKRSLRKADV K I A S K R 1 1 0 1 1 2 0 1 0 2 0 2 0 1 5 2 2 0 0 1 0 0 22 2 2423.2631 P46013 P46013 2219 2240 MKI67 Antigen KI-67 yes yes 3 0.0039021 67.866 By MS/MS By MS/MS 1 1 19939000 10238000 9700500 2338 1704 2583 5823;5824 5381;5382 5382 3144 1 IADLQSPLFR EFHHVFRRIADLQSPL DLQSPLFRGPDDDPAA R I A F R G 1 1 0 1 0 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 10 0 1158.6397 Q9NZJ4 Q9NZJ4 1774 1783 SACS Sacsin yes yes 2 5.4999E-05 119.45 By MS/MS By MS/MS 1 1 3233000 1779600 1453400 2339 2768 2584 5825;5826 5383;5384 5383 5683 2 IADLQSPLFRGPDDDPAALFEMAK EFHHVFRRIADLQSPL AALFEMAKSGQSKKPS R I A A K S 4 1 0 4 0 1 1 1 0 1 3 1 1 2 3 1 0 0 0 0 0 0 24 1 2616.2894 Q9NZJ4 Q9NZJ4 1774 1797 SACS Sacsin yes yes 3 0.00089314 57.985 By MS/MS 1 6330600 6330600 0 2340 2768 2585 5827 5385 5385 5683 1 IADPEHDHTGFLTEYVATR ICDFGLARIADPEHDH LTEYVATRWYRAPEIM R I A T R W 2 1 0 2 0 0 2 1 2 1 1 0 0 1 1 0 3 0 1 1 0 0 19 0 2171.0283 B3KR49;E9PJF0;E9PQW4;P27361 B3KR49 76 94 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 2;3;4 1.0265E-20 136.35 By MS/MS By MS/MS 4 5 756030000 391650000 364380000 2341 474 2586;2587 5828;5829;5830;5831;5832;5833;5834;5835;5836 5386;5387;5388;5389;5390;5391;5392 5387 6346;7285 6 IAISPLKSPNK STTQTPNKIAISPLKS SPLKSPNKAVKSTVQT K I A N K A 1 0 1 0 0 0 0 0 0 2 1 2 0 0 2 2 0 0 0 0 0 0 11 1 1166.7023 Q6MZP7 Q6MZP7 307 317 LIN54 Protein lin-54 homolog yes yes 2 0.002594 92.781 By MS/MS By MS/MS 2 2 13472000 6800100 6671800 2342 2148 2588 5837;5838;5839;5840 5393;5394;5395;5396 5393 4274;4275 3 IAIYELLFK MLMPKKNRIAIYELLF AIYELLFKEGVMVAKK R I A F K E 1 0 0 0 0 0 1 0 0 2 2 1 0 1 0 0 0 0 1 0 0 0 9 0 1108.6532 P46783;F6U211;S4R435 P46783 9 17 RPS10;RPS10-NUDT3 40S ribosomal protein S10 yes no 2 0.0028259 102.51 By MS/MS By MS/MS 1 1 2481900 1895000 586850 2343 1711 2589 5841;5842 5397;5398 5397 7608 2 IALPAPRGSGTASDDEFENLR EVANCCIRIALPAPRG DDEFENLRIKGPNAVQ R I A L R I 3 2 1 2 0 0 2 2 0 1 2 0 0 1 2 2 1 0 0 0 0 0 21 1 2215.0869 Q7Z6Z7 Q7Z6Z7 1895 1915 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.022369 42.309 By matching By MS/MS 1 1 23630000 12391000 11239000 2344 2226 2590 5843;5844 5399 5399 4459;4460 1 IANPVEGSTDR QMSGAQIKIANPVEGS PVEGSTDRQVTITGSA K I A D R Q 1 1 1 1 0 0 1 1 0 1 0 0 0 0 1 1 1 0 0 1 0 0 11 0 1157.5677 Q15366;H3BSS4;H3BRU6;F8VZX2;F8VRH0 Q15366 323 333 PCBP2 Poly(rC)-binding protein 2 yes no 2 0.016151 70.908 By matching By MS/MS 1 1 7860800 4416600 3444200 2345 1985 2591 5845;5846 5400 5400 1 IAQVSPGPR GRSASKLRIAQVSPGP AQVSPGPRDSPAFPDS R I A P R D 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 1 0 0 0 1 0 0 9 0 923.51886 Q9NQS7 Q9NQS7 259 267 INCENP Inner centromere protein yes yes 2 0.0017215 125.74 By MS/MS By MS/MS 1 1 130340000 71350000 58990000 2346 2712 2592 5847;5848 5401;5402 5401 5532 2 IAQVSPGPRDSPAFPDSPWR GRSASKLRIAQVSPGP AFPDSPWRERVLAPIL R I A W R E 2 2 0 2 0 1 0 1 0 1 0 0 0 1 5 3 0 1 0 1 0 0 20 1 2179.0811 Q9NQS7 Q9NQS7 259 278 INCENP Inner centromere protein yes yes 3 0.024311 45.704 By matching By MS/MS 2 2 16994000 8337400 8656900 2347 2712 2593;2594 5849;5850;5851;5852 5403;5404 5403 5527;5532 2 IARLSSGEGPTLANVSELELPADPK SSNTPLVRIARLSSGE LELPADPKWELSRARL R I A P K W 3 1 1 1 0 0 3 2 0 1 4 1 0 0 3 3 1 0 0 1 0 0 25 1 2563.3493 F8W9L4;P22607 F8W9L4 441 465 FGFR3 Fibroblast growth factor receptor;Fibroblast growth factor receptor 3 yes no 3 0.00042202 62.532 By MS/MS 1 10253000 10253000 0 2348 943 2595 5853 5405 5405 1710;1711 1 IASDEEIQGTKDAVIQDLER KKASRTARIASDEEIQ AVIQDLERKLRFKEDL R I A E R K 2 1 0 3 0 2 3 1 0 3 1 1 0 0 0 1 1 0 0 1 0 0 20 1 2229.1125 Q8WX93 Q8WX93 891 910 PALLD Palladin yes yes 2;3 1.9371E-68 174.87 By MS/MS By MS/MS 2 2 283200000 168930000 114270000 2349 2411 2596 5854;5855;5856;5857 5406;5407;5408;5409 5408 4837 4 IASSMSSTFFSR TTRRLLSRIASSMSST MSSTFFSRRSSQDSLN R I A S R R 1 1 0 0 0 0 0 0 0 1 0 0 1 2 0 5 1 0 0 0 0 0 12 0 1319.618 F5H6W4;Q9H992 F5H6W4 230 241 MARCH7 E3 ubiquitin-protein ligase MARCH7 yes no 2 0.015519 56.569 By MS/MS 1 0 0 0 2350 895 2597 5858 5410 5410 1602;1603;1604;1605 1 IATGSFLK PIEWVCRRIATGSFLK IATGSFLKRNPGVKEG R I A L K R 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 1 1 0 0 0 0 0 8 0 835.48035 E9PBS1;P22234;D6RF62 E9PBS1 103 110 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 0.0050007 114.89 By MS/MS By MS/MS 1 1 4864100 2885800 1978200 2351 759 2598 5859;5860 5411;5412 5411 1384 2 IAVAAQNCYK ARQKLDPKIAVAAQNC VAAQNCYKVTNGAFTG K I A Y K V 3 0 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 10 0 1136.5648 P60174 P60174 97 106 TPI1 Triosephosphate isomerase yes yes 2 0.0029886 98.418 By MS/MS By MS/MS 1 1 8935000 5326100 3608900 2352 1781 2599 5861;5862 5413;5414 5414 2 ICARPSPATQTR IAHEIGHRICARPSPA PSPATQTRWTKAAAAA R I C T R W 2 2 0 0 1 1 0 0 0 1 0 0 0 0 2 1 2 0 0 0 0 0 12 1 1356.6932 F6V803 F6V803 230 241 ADAMTS13 yes yes 2 0.016567 61.038 By MS/MS 1 0 0 0 2353 906 2600 5863 5415 5415 1625 1 ICDDELILIK AEEVVQERICDDELIL DDELILIKNTKARTSA R I C I K N 0 0 0 2 1 0 1 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1230.653 F5H282;E7EQR6;P17987;F5GZ03;E7ERF2 F5H282 132 141 TCP1 T-complex protein 1 subunit alpha yes no 2 0.0041573 94.309 By matching By MS/MS 1 1 2952200 1880400 1071700 2354 724 2601 5864;5865 5416 5416 1 ICRDPQTPVLQTK PSKSSVTKICRDPQTP QTPVLQTKHRARAVTC K I C T K H 0 1 0 1 1 2 0 0 0 1 1 1 0 0 2 0 2 0 0 1 0 0 13 1 1554.8188 Q9ULW0 Q9ULW0 363 375 TPX2 Targeting protein for Xklp2 yes yes 2;3 0.003637 104.94 By MS/MS By MS/MS 2 2 43921000 25827000 18094000 2355 2854 2602 5866;5867;5868;5869 5417;5418;5419 5418 7097 3 ICSFEEAK RGFSPPHRICSFEEAK ICSFEEAKGLDRINER R I C A K G 1 0 0 0 1 0 2 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 8 0 982.44298 Q5F2G0;P16298 Q5F2G0 139 146 PPP3CB Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 2 0.0052679 111.06 By MS/MS By MS/MS 1 1 8373400 4271700 4101600 2356 1584 2603 5870;5871 5420;5421 5420 2911 2 ICTEQSNSPPPIR HKFYKQNKICTEQSNS SNSPPPIRRQPTWSRS K I C I R R 0 1 1 0 1 1 1 0 0 2 0 0 0 0 3 2 1 0 0 0 0 0 13 0 1497.7246 Q15678 Q15678 307 319 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 9.0228E-11 143.46 By MS/MS 1 8163200 8163200 0 2357 2001 2604 5872 5422 5422 3905 1 ICTLPSPPSPLASLAPVADSSTR VHEKNGKKICTLPSPP PVADSSTRVDSPSHGL K I C T R V 3 1 0 1 1 0 0 0 0 1 3 0 0 0 5 5 2 0 0 1 0 0 23 0 2336.2046 Q9UER7 Q9UER7 663 685 DAXX Death domain-associated protein 6 yes yes 2;3 3.4296E-13 94.463 By MS/MS By MS/MS 2 2 34652000 21123000 13529000 2358 2807 2605 5873;5874;5875;5876 5423;5424;5425 5423 5752;5753 3 IDASKNEEDEGHSNSSPR SAESEGAKIDASKNEE GHSNSSPRHSEAATAQ K I D P R H 1 1 2 2 0 0 3 1 1 1 0 1 0 0 1 4 0 0 0 0 0 0 18 1 1970.8566 D6RAF8;Q14103;D6RD83 D6RAF8 68 85 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2;3 1.6746E-09 116.78 By MS/MS By MS/MS 3 3 401220000 100170000 301050000 2359 650 2606;2607 5877;5878;5879;5880;5881;5882 5426;5427;5428;5429;5430;5431;5432 5427 5 1167;1168;1169 7 IDEDGENTQIEDTEPMSPVLNSK MESLSSHRIDEDGENT MSPVLNSKFVPAENDS R I D S K F 0 0 2 3 0 1 4 1 0 2 1 1 1 0 2 2 2 0 0 1 0 0 23 0 2560.1487 Q12888;A6NNK5;C9JXV0 Q12888 536 558 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2;3 2.2517E-25 125.67 By MS/MS By MS/MS 2 2 101510000 54664000 46844000 2360 1882 2608 5883;5884;5885;5886 5433;5434;5435;5436 5434 3574 4 IDENSDKEMEVEESPEKIK IGAENSEKIDENSDKE EESPEKIKVQTTPKVE K I D I K V 0 0 1 2 0 0 6 0 0 2 0 3 1 0 1 2 0 0 0 1 0 0 19 2 2248.0417 Q8N3X1 Q8N3X1 495 513 FNBP4 Formin-binding protein 4 yes yes 3 0.016304 50.77 By matching By MS/MS 1 1 10199000 4483700 5715700 2361 2308 2609 5887;5888 5437 5437 4637;4638 1 IDEPLEGSEDR HESGASIKIDEPLEGS PLEGSEDRIITITGTQ K I D D R I 0 1 0 2 0 0 3 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 11 0 1258.5677 P61978;S4R359 P61978 423 433 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.00068657 109.44 By MS/MS By MS/MS 1 1 13875000 6903600 6971400 2362 1788 2610 5889;5890 5438;5439 5438 2 IDFIPVSPAPSPTR EKSASPKRIDFIPVSP SPAPSPTRGIGKQCFS R I D T R G 1 1 0 1 0 0 0 0 0 2 0 0 0 1 4 2 1 0 0 1 0 0 14 0 1495.8035 Q96E09 Q96E09 137 150 FAM122A Protein FAM122A yes yes 2 0.0029278 70.167 By MS/MS By MS/MS 1 1 10414000 6201900 4212300 2363 2476 2611 5891;5892 5440;5441 5440 4988;4989;6998 2 IDFSSIAVPGTSSPR VQFPNLPRIDFSSIAV VPGTSSPRQRQPPGTQ R I D P R Q 1 1 0 1 0 0 0 1 0 2 0 0 0 1 2 4 1 0 0 1 0 0 15 0 1532.7835 Q5TDH0 Q5TDH0 94 108 DDI2 Protein DDI1 homolog 2 yes yes 2 0.0051135 81.594 By MS/MS By MS/MS 1 1 201020000 96837000 104190000 2364 2111 2612 5893;5894 5442;5443 5442 4166;4167;6885 2 IDFTPVSPAPSPTR EKLYSPKRIDFTPVSP SPAPSPTRGFGKMFVS R I D T R G 1 1 0 1 0 0 0 0 0 1 0 0 0 1 4 2 2 0 0 1 0 0 14 0 1483.7671 G1UD79;Q7Z309 Q7Z309 128 141 SPACIA2;FAM122B Protein FAM122B no no 2 0.00043357 105.28 By MS/MS By MS/MS 1 1 15389000 8366700 7022000 2365 956;2208 2613 5895;5896 5444;5445;5446 5446 1734;1735 3 IDGATQSSPAEPK GVAKDNAKIDGATQSS QSSPAEPKSEDADRCT K I D P K S 2 0 0 1 0 1 1 1 0 1 0 1 0 0 2 2 1 0 0 0 0 0 13 0 1299.6307 Q32MZ4 Q32MZ4 707 719 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 2 1.1584E-21 171.11 By MS/MS 1 4889500 0 4889500 2366 2034 2614 5897 5447 5447 3976 1 IDIIPNPQER LDSGKELKIDIIPNPQ IIPNPQERTLTLVDTG K I D E R T 0 1 1 1 0 1 1 0 0 3 0 0 0 0 2 0 0 0 0 0 0 0 10 0 1193.6404 P08238;Q58FF7 P08238 73 82 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.0030085 98.033 By MS/MS By matching 1 1 7408500 3856800 3551600 2367 1542 2615 5898;5899 5448 5448 1 IDISPSTFR KSPEIHRRIDISPSTF DISPSTFRKHGLAHDE R I D F R K 0 1 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 9 0 1034.5397 Q9Y2W1 Q9Y2W1 679 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0017287 144.55 By MS/MS By MS/MS 1 1 247250000 134390000 112860000 2368 2897 2616 5900;5901 5449;5450;5451;5452 5449 6036 4 IDISPSTFRK KSPEIHRRIDISPSTF ISPSTFRKHGLAHDEM R I D R K H 0 1 0 1 0 0 0 0 0 2 0 1 0 1 1 2 1 0 0 0 0 0 10 1 1162.6346 Q9Y2W1 Q9Y2W1 679 688 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 0.00069124 110.98 By MS/MS By MS/MS 2 3 77166000 41272000 35895000 2369 2897 2617 5902;5903;5904;5905;5906 5453;5454;5455;5456;5457;5458;5459 5454 6036 7 IDISPSTLR KSPEIHRRIDISPSTL DISPSTLRKHTRLAGE R I D L R K 0 1 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 9 0 1000.5553 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 655 663 BCLAF1 Bcl-2-associated transcription factor 1 yes no 1;2 0.0037021 90.827 By MS/MS By MS/MS 2 2 537530000 301980000 235540000 2370 2759 2618 5907;5908;5909;5910 5460;5461;5462;5463;5464;5465;5466 5460 5647 7 IDISPSTLRK KSPEIHRRIDISPSTL ISPSTLRKHTRLAGEE R I D R K H 0 1 0 1 0 0 0 0 0 2 1 1 0 0 1 2 1 0 0 0 0 0 10 1 1128.6503 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 655 664 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 0.0011002 103.44 By MS/MS By MS/MS 2 2 130270000 65179000 65094000 2371 2759 2619 5911;5912;5913;5914 5467;5468;5469;5470;5471;5472;5473 5470 5647 7 IDLSSENELASTVSTPVSK YPSLPLTKIDLSSENE TVSTPVSKTAELSPKN K I D S K T 1 0 1 1 0 0 2 0 0 1 2 1 0 0 1 5 2 0 0 2 0 0 19 0 1975.995 E7EVZ1;Q86UP3 E7EVZ1 2714 2732 ZFHX4 Zinc finger homeobox protein 4 yes no 2 0.026405 60.345 By MS/MS By matching 1 1 5139300 2536800 2602500 2372 745 2620 5915;5916 5474 5474 1 IDSIPHLNNSTPLVDPSVYGYGVQK RVRQIAAKIDSIPHLN VYGYGVQKRPLDDGVG K I D Q K R 0 0 2 2 0 1 0 2 1 2 2 1 0 0 3 3 1 0 2 3 0 0 25 0 2712.3759 Q96I24 Q96I24 33 57 FUBP3 Far upstream element-binding protein 3 yes yes 3 0.0002984 58.952 By MS/MS By MS/MS 1 1 15087000 8316400 6770400 2373 2502 2621 5917;5918 5475;5476 5475 7843;7844 2 IDSNISPK MKTSCKFKIDSNISPK IDSNISPKKDSKEFTQ K I D P K K 0 0 1 1 0 0 0 0 0 2 0 1 0 0 1 2 0 0 0 0 0 0 8 0 872.46035 Q9H501 Q9H501 148 155 ESF1 ESF1 homolog yes yes 2 0.0049384 115.91 By MS/MS 1 8626600 8626600 0 2374 2664 2622 5919 5477 5477 5432 1 IDSPGFKPASQQVYR AQPQPIHRIDSPGFKP PASQQVYRKDPYPEEM R I D Y R K 1 1 0 1 0 2 0 1 0 1 0 1 0 1 2 2 0 0 1 1 0 0 15 1 1691.8631 A0A087X0K9;G5E9E7 A0A087X0K9 898 912 TJP1 yes no 3 0.00021883 88.78 By MS/MS By MS/MS 1 1 35221000 17758000 17463000 2375 129 2623 5920;5921 5478;5479 5478 231 2 IDSTEVIYQPR GMDTFIHRIDSTEVIY TEVIYQPRRKRAKLIG R I D P R R 0 1 0 1 0 1 1 0 0 2 0 0 0 0 1 1 1 0 1 1 0 0 11 0 1319.6721 K7EMR0;K7EQN8;K7EP59;Q15831 K7EMR0 29 39 STK11 Serine/threonine-protein kinase STK11 yes no 2 0.0043421 78.548 By MS/MS 1 3812200 0 3812200 2376 1283 2624 5922 5480 5480 2314;6574 1 IDTIEIITDR DYFEEYGKIDTIEIIT TIEIITDRQSGKKRGF K I D D R Q 0 1 0 2 0 0 1 0 0 4 0 0 0 0 0 0 2 0 0 0 0 0 10 0 1187.6398 P22626;A0A087WUI2 P22626 138 147 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 1.0536E-05 148.69 By MS/MS By MS/MS 1 1 6055300 2853800 3201600 2377 1618 2625 5923;5924 5481;5482 5482 2 IDYQGRPSGGFVISGVLSPDTISSK LEYWRGERIDYQGRPS SPDTISSKRKAKENIG R I D S K R 0 1 0 2 0 1 0 4 0 3 1 1 0 1 2 5 1 0 1 2 0 0 25 1 2579.3231 H0Y8J2;Q03188;H0Y9W1 H0Y8J2 663 687 CENPC Centromere protein C yes no 3 0.0031076 50.583 By MS/MS 1 3151600 3151600 0 2378 1041 2626 5925 5483 5483 1930 1 IEAYMDTLQTQWSWILQITK NQHPASDKIEAYMDTL SWILQITKCIDVHLKE K I E T K C 1 0 0 1 0 3 1 0 0 3 2 1 1 0 0 1 3 2 1 0 0 0 20 0 2467.2457 P15924 P15924 347 366 DSP Desmoplakin yes yes 3 0.024749 46.159 By MS/MS 1 0 0 0 2379 1582 2627 5926 5484 5484 1 IEDLSQQAQLAAAEK YIVFGEAKIEDLSQQA AQLAAAEKFKVQGEAV K I E E K F 4 0 0 1 0 3 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 15 0 1613.8261 F8VZJ2;F8W0W4;H0YHX9;Q13765;E9PAV3;F8W1N5;F8VNW4 F8VZJ2 49 63 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 2 1.9906E-06 119.39 By MS/MS By MS/MS 1 1 4792000 2632000 2160000 2380 755 2628 5927;5928 5485;5486 5485 2 IEDSEPHIPLIDDTDAEDDAPTKR FMTHPEFRIEDSEPHI EDDAPTKRNSSPPP__ R I E K R N 2 1 0 6 0 0 3 0 1 3 1 1 0 0 3 1 2 0 0 0 0 0 24 1 2691.2511 H0YHH6;A0A0U1RQU3;E7ERY9;P20020 H0YHH6 133 156 ATP2B1 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 1 yes no 3 0.0015992 53.278 By MS/MS By matching 1 1 8397400 6425300 1972000 2381 343 2629 5929;5930 5487 5487 635 1 IEDVGSDEEDDSGK KDDEEKPKIEDVGSDE DEEDDSGKDKKKKTKK K I E G K D 0 0 0 4 0 0 3 2 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 0 1493.6005 P08238;Q58FF8 P08238 250 263 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 6.3768E-58 193.98 By MS/MS By MS/MS 1 1 83849000 38176000 45673000 2382 1542 2630 5931;5932 5488;5489;5490;5491 5489 2835 4 IEDVGSDEEDDSGKDK KDDEEKPKIEDVGSDE EDDSGKDKKKKTKKIK K I E D K K 0 0 0 5 0 0 3 2 0 1 0 2 0 0 0 2 0 0 0 1 0 0 16 1 1736.7224 P08238;Q58FF8 P08238 250 265 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 2.0125E-278 276.34 By MS/MS By MS/MS 2 2 400080000 161750000 238330000 2383 1542 2631 5933;5934;5935;5936 5492;5493;5494;5495;5496;5497;5498 5494 2835 7 IEDVGSDEEDDSGKDKK KDDEEKPKIEDVGSDE DDSGKDKKKKTKKIKE K I E K K K 0 0 0 5 0 0 3 2 0 1 0 3 0 0 0 2 0 0 0 1 0 0 17 2 1864.8174 P08238;Q58FF8 P08238 250 266 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 6.1105E-69 191.41 By MS/MS By MS/MS 4 5 1225700000 496540000 729130000 2384 1542 2632 5937;5938;5939;5940;5941;5942;5943;5944;5945 5499;5500;5501;5502;5503;5504;5505;5506;5507 5507 2835 9 IEDVTPIPSDSTRR RSGMKIGRIEDVTPIP IPSDSTRRKGGRRGRR R I E R R K 0 2 0 2 0 0 1 0 0 2 0 0 0 0 2 2 2 0 0 1 0 0 14 1 1584.8107 P62263 P62263 129 142 RPS14 40S ribosomal protein S14 yes yes 2;3 0.00046624 84.173 By MS/MS By MS/MS 2 2 23687000 12635000 11052000 2385 1794 2633 5946;5947;5948;5949 5508;5509;5510 5510 3369;3370;6746 3 IEEFVYEKLDR LQPNPNARIEEFVYEK FVYEKLDRKAPSRINN R I E D R K 0 1 0 1 0 0 3 0 0 1 1 1 0 1 0 0 0 0 1 1 0 0 11 1 1439.7296 A0A087WW40;Q9Y371 A0A087WW40 75 85 SH3GLB1 Endophilin-B1 yes no 2;3 5.9805E-06 140.49 By MS/MS By MS/MS 2 2 29691000 18503000 11188000 2386 70 2634 5950;5951;5952;5953 5511;5512;5513 5513 7160 3 IEEGVPQFLVLISSGK FKRPLGSRIEEGVPQF LVLISSGKSDDEVDDP R I E G K S 0 0 0 0 0 1 2 2 0 2 2 1 0 1 1 2 0 0 0 2 0 0 16 0 1714.9505 E7ENL6;P12111 E7ENL6 725 740 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0038446 71.268 By matching By MS/MS 1 1 6038000 3465100 2572900 2387 710 2635 5954;5955 5514 5514 1 IEEQELSENTSLPAEEANGSLSEEEANGPELGSGK SPSELSPRIEEQELSE GPELGSGKAMEDTSGE R I E G K A 3 0 3 0 0 1 10 4 0 1 4 1 0 0 2 5 1 0 0 0 0 0 35 0 3643.6497 E9PMG4;Q9BUR4;E9PMR3 E9PMG4 93 127 WRAP53 Telomerase Cajal body protein 1 yes no 3 0.0088583 41.035 By MS/MS By matching 1 1 16795000 10741000 6054100 2388 829 2636 5956;5957 5515 5515 1493;1494 1 IEEVLSPEGSPSKSPSK ITIKSPEKIEEVLSPE SPSKSPSKKKKKFRTP K I E S K K 0 0 0 0 0 0 3 1 0 1 1 2 0 0 3 5 0 0 0 1 0 0 17 1 1769.9047 Q9UEY8 Q9UEY8 668 684 ADD3 Gamma-adducin yes yes 3 0.0071131 92.133 By MS/MS 1 0 0 0 2389 2808 2637 5958 5516 5516 5754;5755 1 IEIAQKHPDIYAVPIK LQEAQNARIEIAQKHP DIYAVPIKTHKPDPGT R I E I K T 2 0 0 1 0 1 1 0 1 4 0 2 0 0 2 0 0 0 1 1 0 0 16 1 1834.0353 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1167 1182 TJP2 Tight junction protein ZO-2 yes no 3 8.4983E-05 90.759 By MS/MS By MS/MS 1 1 12358000 5511100 6847300 2390 368 2638 5959;5960 5517;5518 5517 7254 2 IEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVK WQKNGVFKIEIIQPLL GSPPPPVKVSSEPPTQ K I E V K V 5 0 4 1 0 1 3 2 0 3 2 1 1 0 6 2 2 0 0 3 0 0 36 0 3653.8611 O95104 O95104 125 160 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 3 0.0093305 40.513 By MS/MS 1 14738000 14738000 0 2391 1473 2639 5961 5519 5519 2727 1 IEIPVTPTGQSVPSSPSIPGTPTLK GNGVKKPKIEIPVTPT IPGTPTLKMWGTSPED K I E L K M 0 0 0 0 0 1 1 2 0 3 1 1 0 0 6 4 4 0 0 2 0 0 25 0 2502.3581 Q9H4Z3 Q9H4Z3 130 154 PCIF1 Phosphorylated CTD-interacting factor 1 yes yes 3 0.00037256 59.819 By MS/MS By MS/MS 1 1 8886000 5392000 3493900 2392 2663 2640 5962;5963 5520;5521 5521 5427;5428 2 IEKIGEGTYGVVYK ________________ GTYGVVYKGRHKTTGQ K I E Y K G 0 0 0 0 0 0 2 3 0 2 0 2 0 0 0 0 1 0 2 2 0 0 14 1 1554.8294 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7 E5RIU6 7 20 CDK1;CDC2 Cyclin-dependent kinase 1 yes no 2;3 5.7129E-45 188.15 By MS/MS By MS/MS 4 4 108670000 69897000 38772000 2393 119 2641;2642 5964;5965;5966;5967;5968;5969;5970;5971 5522;5523;5524;5525;5526;5527;5528;5529 5523 6249;7174 8 IEKIGEGTYGVVYKGR ________________ YGVVYKGRHKTTGQVV K I E G R H 0 1 0 0 0 0 2 4 0 2 0 2 0 0 0 0 1 0 2 2 0 0 16 2 1767.9519 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7 E5RIU6 7 22 CDK1;CDC2 Cyclin-dependent kinase 1 yes no 3 5.0989E-21 140.22 By MS/MS By MS/MS 1 1 39662000 23311000 16351000 2394 119 2643 5972;5973 5530;5531 5530 6249;7174 2 IEKLSDDEEVDITDEVDELSSQTPQK DPNLNAVKIEKLSDDE LSSQTPQKNSSSDLLL K I E Q K N 0 0 0 5 0 2 5 0 0 2 2 2 0 0 1 3 2 0 0 2 0 0 26 1 2961.3826 Q5VVJ2 Q5VVJ2 214 239 MYSM1 Histone H2A deubiquitinase MYSM1 yes yes 3 0.020148 40.756 By matching By MS/MS 1 1 17503000 11768000 5734200 2395 2118 2644 5974;5975 5532 5532 4200 1 IEKMSSEVVDSNPYSRLMALK DGGGGRVRIEKMSSEV YSRLMALKRMGIVSDY R I E L K R 1 1 1 1 0 0 2 0 0 1 2 2 2 0 1 4 0 0 1 2 0 0 21 2 2396.208 E7EWE1;E7EQ61;Q9GZZ9 E7EWE1 40 60 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes no 3 0.01462 43.658 By MS/MS By matching 1 1 34344000 18318000 16026000 2396 720 2645 5976;5977 5533 5533 83 1279;1280 1 IEMEDPCLMLASRFK FLKSQVRRIEMEDPCL LMLASRFKQVQTLAVT R I E F K Q 1 1 0 1 1 0 2 0 0 1 2 1 2 1 1 1 0 0 0 0 0 0 15 1 1838.8729 A2RU30 A2RU30 208 222 TESPA1 Protein TESPA1 yes yes 2 0.015939 61.423 By matching By MS/MS 1 1 15493000 7878400 7614500 2397 401 2646 5978;5979 5534 5534 42 768 1 IENPNQFVPLYTDPQEVLEMR SSSGMPIRIENPNQFV PQEVLEMRNKIREQNR R I E M R N 0 1 2 1 0 2 3 0 0 1 2 0 1 1 3 0 1 0 1 2 0 0 21 0 2531.2366 P35612 P35612 479 499 ADD2 Beta-adducin yes yes 3 0.0018502 57.537 By MS/MS By matching 1 1 7708800 5984600 1724200 2398 1674 2647 5980;5981 5535 5535 7594 1 IEPIPGESPK KGQEVCVKIEPIPGES PIPGESPKMFGRHFEA K I E P K M 0 0 0 0 0 0 2 1 0 2 0 1 0 0 3 1 0 0 0 0 0 0 10 0 1065.5706 A0A087WUT6;O60841 A0A087WUT6 1161 1170 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0017403 96.82 By MS/MS By MS/MS 1 1 6399300 3001500 3397800 2399 49 2648 5982;5983 5536;5537 5536 80 2 IESDEEEDFENVGK ESTKKPYRIESDEEED EDFENVGKVGSPLDYS R I E G K V 0 0 1 2 0 0 5 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 14 0 1638.6897 Q96T23 Q96T23 1343 1356 RSF1 Remodeling and spacing factor 1 yes yes 2 7.331E-46 188.12 By MS/MS By MS/MS 1 1 15977000 9904200 6072300 2400 2544 2649 5984;5985 5538;5539 5538 5138 2 IESDVQEPTEPEDDLDIMLGNK EEGVKDLKIESDVQEP LDIMLGNKKKKKKNVK K I E N K K 0 0 1 4 0 1 4 1 0 2 2 1 1 0 2 1 1 0 0 1 0 0 22 0 2486.137 P20042 P20042 103 124 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2;3 0.00033315 73.138 By MS/MS By MS/MS 2 2 37371000 20980000 16390000 2401 1607 2650 5986;5987;5988;5989 5540;5541;5542;5543;5544 5544 2966 5 IESDVQEPTEPEDDLDIMLGNKK EEGVKDLKIESDVQEP DIMLGNKKKKKKNVKF K I E K K K 0 0 1 4 0 1 4 1 0 2 2 2 1 0 2 1 1 0 0 1 0 0 23 1 2614.232 P20042 P20042 103 125 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 0.015622 42.309 By MS/MS By matching 1 1 5651600 3324300 2327200 2402 1607 2651 5990;5991 5545;5546 5546 2966 2 IESFGSPK DGMDTVKKIESFGSPK IESFGSPKGSVCRRIT K I E P K G 0 0 0 0 0 0 1 1 0 1 0 1 0 1 1 2 0 0 0 0 0 0 8 0 863.43888 P49792 P49792 3202 3209 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.02524 79.974 By MS/MS 1 0 0 0 2403 1730 2652 5992 5547 5547 1 IESKSMSAPVIFDR PTTLIAPRIESKSMSA SAPVIFDRSREEIEEE R I E D R S 1 1 0 1 0 0 1 0 0 2 0 1 1 1 1 3 0 0 0 1 0 0 14 1 1578.8076 O60749;D6RC15 O60749 113 126 SNX2 Sorting nexin-2 yes no 2 0.0021916 83.729 By MS/MS By matching 1 1 3763500 2273400 1490100 2404 1419 2653 5993;5994 5548 5548 2610;2611;2612 1 IESPKLER VVTQPKPKIESPKLER IESPKLERTPNGPNID K I E E R T 0 1 0 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 8 1 970.54475 Q92598;Q5TBM3;A0A0A0MSM0 Q92598 807 814 HSPH1 Heat shock protein 105 kDa yes no 1;2 0.013274 88.803 By MS/MS By matching 2 2 450270000 216740000 233530000 2405 2426 2654 5995;5996;5997;5998 5549;5550 5550 4877 2 IEVIEIMTDR DYFEQYGKIEVIEIMT VIEIMTDRGSGKKRGF K I E D R G 0 1 0 1 0 0 2 0 0 3 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1217.6326 F8W6I7;P09651;F8VTQ5;H0YH80;F8VYN5;F8VZ49;Q32P51 F8W6I7 131 140 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 5.9297E-05 120.99 By MS/MS By matching 1 1 8510300 4135300 4375100 2406 933 2655 5999;6000 5551 5551 1 IEVLDSPASK NSEGGKGKIEVLDSPA VLDSPASKKKK_____ K I E S K K 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 0 0 0 1 0 0 10 0 1057.5655 Q8N5I9 Q8N5I9 173 182 C12orf45 Uncharacterized protein C12orf45 yes yes 2 3.0399E-05 139.76 By MS/MS By MS/MS 1 1 8056900 3799900 4257000 2407 2317 2656 6001;6002 5552;5553 5552 4654 2 IFFDTDDDDDMPHSTSR SPNCVKPKIFFDTDDD DMPHSTSRWRDTANDN K I F S R W 0 1 0 6 0 0 0 0 1 1 0 0 1 2 1 2 2 0 0 0 0 0 17 0 2012.8058 Q8NG27 Q8NG27 273 289 PJA1 E3 ubiquitin-protein ligase Praja-1 yes yes 3 0.0012003 73.252 By MS/MS By MS/MS 2 1 18572000 10646000 7925100 2408 2358 2657;2658 6003;6004;6005 5554;5555;5556 5556 317 6968 3 IFGVTTLDIVR HGVYNPNKIFGVTTLD VTTLDIVRANTFVAEL K I F V R A 0 1 0 1 0 0 0 1 0 2 1 0 0 1 0 0 2 0 0 2 0 0 11 0 1232.7129 P40926;G3XAL0 P40926 166 176 MDH2 Malate dehydrogenase, mitochondrial;Malate dehydrogenase yes no 2 0.0048802 87.913 By MS/MS By MS/MS 1 1 2174800 1263400 911430 2409 1688 2659 6006;6007 5557;5558 5557 2 IFLGADAEEEIGTPR TVGDFDERIFLGADAE EEEIGTPRKFTRDTPL R I F P R K 2 1 0 1 0 0 3 2 0 2 1 0 0 1 1 0 1 0 0 0 0 0 15 0 1616.8046 P28749;H0YE05 P28749 320 334 RBL1 Retinoblastoma-like protein 1 yes no 2 0.0021 88.311 By MS/MS By MS/MS 1 1 6026400 5077700 948700 2410 1643 2660 6008;6009 5559;5560;5561 5559 6690 2 IFPDRLSGEMPPASPSFPR EINLNKDRIFPDRLSG PASPSFPRNKRTDANE R I F P R N 1 2 0 1 0 0 1 1 0 1 1 0 1 2 5 3 0 0 0 0 0 0 19 1 2100.0462 Q96JM7 Q96JM7 595 613 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 yes yes 3 0.001591 70.167 By MS/MS By MS/MS 1 1 8746700 4612500 4134200 2411 2510 2661 6010;6011 5562;5563 5563 335 5071;5072 2 IFPLRPDYQEPSR GSNSTYDRIFPLRPDY PDYQEPSRLIRKLPEF R I F S R L 0 2 0 1 0 1 1 0 0 1 1 0 0 1 3 1 0 0 1 0 0 0 13 1 1616.8311 Q16832;Q5T241;H0Y570 Q16832 474 486 DDR2 Discoidin domain-containing receptor 2 yes no 2;3 0.013781 55.261 By MS/MS By MS/MS 1 1 6557100 2982300 3574800 2412 2021 2662 6012;6013 5564;5565 5564 3951;7725 2 IFSLSGTLETVR QLRERHWRIFSLSGTL SGTLETVRGRGVVGRE R I F V R G 0 1 0 0 0 0 1 1 0 1 2 0 0 1 0 2 2 0 0 1 0 0 12 0 1321.7242 B4DEM9;Q9Y2S7 B4DEM9 268 279 POLDIP2 Polymerase delta-interacting protein 2 yes no 2 0.0023076 107.99 By MS/MS By MS/MS 1 1 6125100 4183700 1941400 2413 479 2663 6014;6015 5566;5567 5566 6347 2 IFTKLSYPQDNLQPDVNLK QDLPLKERIFTKLSYP LQPDVNLKTLSILSVK R I F L K T 0 0 2 2 0 2 0 0 0 1 3 2 0 1 2 1 1 0 1 1 0 0 19 1 2232.179 Q17RS7 Q17RS7 678 696 GEN1 Flap endonuclease GEN homolog 1 yes yes 3 0.011728 49.537 By matching By MS/MS 1 1 11008000 5395600 5612400 2414 2023 2664 6016;6017 5568 5568 3955 1 IFVGGLNPEATEEK MKKDPVKKIFVGGLNP NPEATEEKIREYFGEF K I F E K I 1 0 1 0 0 0 3 2 0 1 1 1 0 1 1 0 1 0 0 1 0 0 14 0 1502.7617 D6R9P3;D6RD18;D6RBZ0 D6R9P3 156 169 HNRNPAB yes no 2 0.0014315 98.04 By matching By MS/MS 1 1 4966800 1933000 3033900 2415 646 2665 6018;6019 5569 5569 1 IFVGGLSPDTPEEK KTKEPVKKIFVGGLSP SPDTPEEKIREYFGGF K I F E K I 0 0 0 1 0 0 2 2 0 1 1 1 0 1 2 1 1 0 0 1 0 0 14 0 1487.7508 D6RAF8;Q14103;D6RF44;H0YA96;H0Y8G5 D6RAF8 184 197 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.00092965 99.752 By MS/MS By MS/MS 2 2 18273000 9928800 8343800 2416 650 2666;2667 6020;6021;6022;6023 5570;5571;5572;5573 5573 1170 4 IFVNDDR ________________ RIFVNDDRHVMAKHSS R I F D R H 0 1 1 2 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 7 0 877.42938 Q12906;K7EKJ9;K7ERM6;K7ENK6;K7EM82;K7EJ09;K7ER69 Q12906 6 12 ILF3 Interleukin enhancer-binding factor 3 yes no 2 0.02965 92.467 By MS/MS By matching 1 1 8322300 4204600 4117700 2417 1884 2668 6024;6025 5574 5574 1 IFYYFSNSPSKR TMLSPREKIFYYFSNS FSNSPSKRLREINSMI K I F K R L 0 1 1 0 0 0 0 0 0 1 0 1 0 2 1 3 0 0 2 0 0 0 12 1 1507.746 Q08999 Q08999 1073 1084 RBL2 Retinoblastoma-like protein 2 yes yes 3 1.2707E-07 126.1 By MS/MS By MS/MS 1 1 4457900 2566600 1891300 2418 1867 2669 6026;6027 5575;5576 5575 3512 2 IGAEVYHNLK ANFREAMRIGAEVYHN AEVYHNLKNVIKEKYG R I G L K N 1 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1142.6084 P06733;K7EM90 P06733 184 193 ENO1 Alpha-enolase;Enolase yes no 3 0.0040181 76.17 By MS/MS By MS/MS 1 1 3521000 1543800 1977200 2419 1532 2670 6028;6029 5577;5578 5577 2 IGDEYAEDSSDEEDIR RTEMASARIGDEYAED SSDEEDIRNTVGNVPL R I G I R N 1 1 0 4 0 0 4 1 0 2 0 0 0 0 0 2 0 0 1 0 0 0 16 0 1841.7439 A0A075B729;Q14137 A0A075B729 48 63 BOP1 Ribosome biogenesis protein BOP1 yes no 2 0.00020246 114.63 By MS/MS By MS/MS 2 2 9053800 6161400 2892500 2420 10 2671;2672 6030;6031;6032;6033 5579;5580;5581;5582 5579 23;24 4 IGDLGLATLKRASFAK TGPTGSVKIGDLGLAT LKRASFAKSVIGTPEF K I G A K S 3 1 0 1 0 0 0 2 0 1 3 2 0 1 0 1 1 0 0 0 0 0 16 2 1659.9672 F5GWT4;Q9H4A3;F6UYG0;K7ENT7;A6PVV2;Q96J92;F8W9F9;H0Y7T5;Q9Y3S1 F5GWT4 366 381 WNK1;WNK4;WNK2 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK4;Serine/threonine-protein kinase WNK2 no no 3 0.0016913 74.649 By MS/MS By MS/MS 1 1 9035700 5214400 3821300 2421 859;942 2673 6034;6035 5583;5584 5584 1545;6461 2 IGEGTYGTVFK QKYEKLEKIGEGTYGT GTYGTVFKAKNRETHE K I G F K A 0 0 0 0 0 0 1 3 0 1 0 1 0 1 0 0 2 0 1 1 0 0 11 0 1170.5921 Q00535 Q00535 10 20 CDK5 Cyclin-dependent-like kinase 5 yes yes 2 0.00052489 103.55 By matching By MS/MS 1 1 8087100 4607400 3479700 2422 1824 2674 6036;6037 5585 5585 7661 1 IGEGTYGVVYK EDYTKIEKIGEGTYGV GTYGVVYKGRHKTTGQ K I G Y K G 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 0 11 0 1184.6077 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;G3V317;E7ESI2;G3V5T9;P24941;K7ELV5;Q00526 E5RIU6 10 20 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 no no 2 1.4573E-21 177.3 By MS/MS By MS/MS 2 2 1531500000 855160000 676310000 2423 119;732 2675 6038;6039;6040;6041 5586;5587;5588;5589;5590 5588 6249;6424;7174;7363 5 IGEGTYGVVYKAR ENFQKVEKIGEGTYGV YGVVYKARNKLTGEVV K I G A R N 1 1 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 0 13 1 1411.746 G3V317;E7ESI2;G3V5T9;P24941 G3V317 10 22 CDK2 Cyclin-dependent kinase 2 yes no 2;3 0.00097391 84.605 By MS/MS By MS/MS 2 2 32742000 17522000 15220000 2424 732 2676 6042;6043;6044;6045 5591;5592;5593 5591 6424;7363 3 IGEGTYGVVYKGR EDYTKIEKIGEGTYGV YGVVYKGRHKTTGQVV K I G G R H 0 1 0 0 0 0 1 4 0 1 0 1 0 0 0 0 1 0 2 2 0 0 13 1 1397.7303 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7 E5RIU6 10 22 CDK1;CDC2 Cyclin-dependent kinase 1 yes no 2;3 3.8895E-29 178.46 By MS/MS By MS/MS 3 3 146480000 84665000 61810000 2425 119 2677;2678 6046;6047;6048;6049;6050;6051 5594;5595;5596;5597;5598;5599 5596 6249;7174 6 IGEHTPSALAIMENANVLAR AKWRCVLKIGEHTPSA ENANVLARYASICQQV K I G A R Y 4 1 2 0 0 0 2 1 1 2 2 0 1 0 1 1 1 0 0 1 0 0 20 0 2106.0892 J3KPS3;P04075;H3BQN4;H3BR04;H3BPS8;H3BU78 J3KPS3 154 173 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 3 0.0029191 62.589 By MS/MS 1 1672300 1672300 0 2426 1232 2679 6052 5600 5600 1 IGELGAPEVWGLSPK KRLSERERIGELGAPE EVWGLSPKNPEPDSDE R I G P K N 1 0 0 0 0 0 2 3 0 1 2 1 0 0 2 1 0 1 0 1 0 0 15 0 1551.8297 Q8N5F7 Q8N5F7 137 151 NKAP NF-kappa-B-activating protein yes yes 2 0.00017462 107.63 By MS/MS By MS/MS 1 1 19890000 9096300 10794000 2427 2316 2680 6053;6054 5601;5602 5602 4653 2 IGEYKQLMRSR IVDGKKLRIGEYKQLM YKQLMRSRRQEMRQFF R I G S R R 0 2 0 0 0 1 1 1 0 1 1 1 1 0 0 1 0 0 1 0 0 0 11 2 1379.7344 P35712 P35712 707 717 SOX6 Transcription factor SOX-6 yes yes 2 0.015251 50.04 By matching By MS/MS 1 1 15661000 7751300 7909800 2428 1675 2681 6055;6056 5603 5603 208 3087;7595 1 IGFPSTSPAK APIHKVIRIGFPSTSP FPSTSPAKAKKTKRMA R I G A K A 1 0 0 0 0 0 0 1 0 1 0 1 0 1 2 2 1 0 0 0 0 0 10 0 1003.5338 Q9UDT6 Q9UDT6 288 297 CLIP2 CAP-Gly domain-containing linker protein 2 yes yes 2 0.019475 64.224 By matching By MS/MS 1 1 3671400 1880800 1790600 2429 2805 2682 6057;6058 5604 5604 5748 1 IGGAEITGYYVNYREVIDGVPGK LGWKQPDKIGGAEITG VIDGVPGKWREANVKA K I G G K W 1 1 1 1 0 0 2 5 0 3 0 1 0 0 1 0 1 0 3 3 0 0 23 1 2469.254 A8MX12;P52179 A8MX12 727 749 MYOM1 Myomesin-1 yes no 3 0.012295 41.136 By MS/MS By matching 1 1 60810000 38362000 22448000 2430 436 2683 6059;6060 5605 5605 7270;7271 1 IGGDAATTVNNSTPDFGFGGQKR RARQIAAKIGGDAATT FGFGGQKRQLEDGDQP K I G K R Q 2 1 2 2 0 1 0 5 0 1 0 1 0 2 1 1 3 0 0 1 0 0 23 1 2309.1036 A0A087WTP3;Q92945;M0R0I5 A0A087WTP3 88 110 KHSRP Far upstream element-binding protein 2 yes no 3 3.4399E-06 81.643 By MS/MS By MS/MS 2 2 67475000 39541000 27935000 2431 28 2684;2685 6061;6062;6063;6064 5606;5607;5608;5609 5609 1;2 54;6220;6221;6222 4 IGGDAGTSLNSNDYGYGGQK RARQIAAKIGGDAGTS DYGYGGQKRPLEDGDQ K I G Q K R 1 0 2 2 0 1 0 6 0 1 1 1 0 0 0 2 1 0 2 0 0 0 20 0 1972.8763 Q96AE4;C9JSZ1;E9PEB5 Q96AE4 45 64 FUBP1 Far upstream element-binding protein 1 yes no 2 4.4844E-08 87.083 By MS/MS By matching 1 1 6897800 4460400 2437400 2432 2457 2686 6065;6066 5610 5610 7833 1 IGGIGTVPVGR LPLQDVYKIGGIGTVP IGTVPVGRVETGVLKP K I G G R V 0 1 0 0 0 0 0 4 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1024.6029 P68104;A0A087WVQ9;Q5VTE0;Q05639 P68104 256 266 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 2 yes no 2 1.7528E-05 120.87 By MS/MS By MS/MS 1 1 37109000 21653000 15456000 2433 1809 2687 6067;6068 5611;5612 5611 2 IGIEIIK TPANEDQKIGIEIIKR KIGIEIIKRTLKIPAM K I G I K R 0 0 0 0 0 0 1 1 0 4 0 1 0 0 0 0 0 0 0 0 0 0 7 0 784.50584 P10809 P10809 463 469 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.012429 104.11 By MS/MS 1 998700 998700 0 2434 1557 2688 6069 5613 5613 1 IGLPHSIK FNSAIRGKIGLPHSIK IGLPHSIKLSRRRSRS K I G I K L 0 0 0 0 0 0 0 1 1 2 1 1 0 0 1 1 0 0 0 0 0 0 8 0 863.52289 G3XAC6;Q14498;Q5QP22;Q5QP23 G3XAC6 112 119 RBM39 RNA-binding protein 39 yes no 2 9.7436E-08 119.22 By MS/MS By MS/MS 1 1 1184400 1184400 0 2435 984 2689 6070;6071 5614;5615 5615 1790 2 IGLYPANYVECVGA QGQLQSGRIGLYPANY NYVECVGA________ R I G G A - 2 0 1 0 1 0 1 2 0 1 1 0 0 0 1 0 0 0 2 2 0 0 14 0 1524.7283 Q9UKS6 Q9UKS6 411 424 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes yes 2 0.0066152 61.78 By MS/MS By matching 1 1 8207500 4950000 3257500 2436 2835 2690 6072;6073 5616 5616 7937 1 IGPLGLSPK ATSALAPKIGPLGLSP GPLGLSPKKVGDDIAK K I G P K K 0 0 0 0 0 0 0 2 0 1 2 1 0 0 2 1 0 0 0 0 0 0 9 0 880.5382 P30050 P30050 32 40 RPL12 60S ribosomal protein L12 yes yes 2 0.0046432 102.05 By MS/MS By MS/MS 2 2 52964000 28712000 24252000 2437 1651 2691;2692 6074;6075;6076;6077 5617;5618;5619;5620 5620 3054 4 IGSDPLAYEPK SPTMSRARIGSDPLAY DPLAYEPKEDLPVITI R I G P K E 1 0 0 1 0 0 1 1 0 1 1 1 0 0 2 1 0 0 1 0 0 0 11 0 1188.6027 P19634 P19634 701 711 SLC9A1 Sodium/hydrogen exchanger 1 yes yes 2 4.5452E-05 118.76 By MS/MS By MS/MS 1 1 4549800 2383000 2166800 2438 1605 2693 6078;6079 5621;5622 5622 2965 2 IGSLGLGTGEDDDYVDDFNSTSHR DLKLISDKIGSLGLGT DFNSTSHRSEKSEISI K I G H R S 0 1 1 5 0 0 1 4 1 1 2 0 0 1 0 3 2 0 1 1 0 0 24 0 2569.1205 O95684;A0A087WV25 O95684 324 347 FGFR1OP FGFR1 oncogene partner yes no 2;3 3.9908E-43 138.82 By MS/MS By MS/MS 2 2 112360000 65191000 47168000 2439 1496 2694 6080;6081;6082;6083 5623;5624;5625 5623 6647;7543 3 IGSMTGAEQALLPR YNLQERRRIGSMTGAE AEQALLPRVPTDEIEA R I G P R V 2 1 0 0 0 1 1 2 0 1 2 0 1 0 1 1 1 0 0 0 0 0 14 0 1442.7551 P04920 P04920 241 254 SLC4A2 Anion exchange protein 2 yes yes 2 0.0014903 84.753 By MS/MS By MS/MS 1 1 3347900 2052000 1295900 2440 1523 2695 6084;6085 5626;5627;5628;5629 5627 2808 4 IGSTTNPFLDIPHDPNAAVYK THPKTISRIGSTTNPF DPNAAVYKSGFLARKI R I G Y K S 2 0 2 2 0 0 0 1 1 2 1 1 0 1 3 1 2 0 1 1 0 0 21 0 2269.1379 A0A087X1Z0;A0A087WXD8;B4DKF8;E5RJ29;Q9NYI0 A0A087X1Z0 96 116 PSD3 PH and SEC7 domain-containing protein 3 yes no 3 0.0076383 52.158 By MS/MS By MS/MS 1 1 9461700 5594800 3866900 2441 85 2696 6086;6087 5630;5631 5630 159;6236 2 IGTAEPDYGALYEGR INEEALEKIGTAEPDY YGALYEGRNPGFYVEA K I G G R N 2 1 0 1 0 0 2 3 0 1 1 0 0 0 1 0 1 0 2 0 0 0 15 0 1610.7577 P19174 P19174 764 778 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 2 2.359E-20 138.45 By MS/MS By MS/MS 1 1 41271000 19346000 21925000 2442 1603 2697 6088;6089 5632;5633 5633 7571 2 IGTAEPDYGALYEGRNPGFYVEANPMPTFK INEEALEKIGTAEPDY ANPMPTFKCAVKALFD K I G F K C 3 1 2 1 0 0 3 4 0 1 1 1 1 2 4 0 2 0 3 1 0 0 30 1 3303.5547 P19174 P19174 764 793 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 3 0.012314 43.895 By MS/MS 1 7648100 0 7648100 2443 1603 2698 6090 5634 5634 7571;7572 1 IGTLHTSPDLK FVRKTTEKIGTLHTSP LHTSPDLKVRPELRGD K I G L K V 0 0 0 1 0 0 0 1 1 1 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1180.6452 Q9UPZ3 Q9UPZ3 557 567 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 2 2.9865E-06 152.67 By MS/MS By MS/MS 1 1 10181000 5685700 4495600 2444 2876 2699 6091;6092 5635;5636 5636 5941;7102 2 IGVITNR TGGANLGRIGVITNRE RIGVITNRERHPGSFD R I G N R E 0 1 1 0 0 0 0 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 7 0 771.46029 P62701 P62701 192 198 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 0.025011 128.82 By MS/MS By matching 1 1 5124300 2618900 2505400 2445 1798 2700 6093;6094 5637 5637 1 IHGSAAREEDEHPYELLLTAETK EVLSMRPRIHGSAARE LLLTAETKKVVLVDGK R I H T K K 3 1 0 1 0 0 5 1 2 1 3 1 0 0 1 1 2 0 1 0 0 0 23 1 2608.2769 Q92625 Q92625 442 464 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 4 0.0053886 45.423 By MS/MS By matching 1 1 11474000 5197500 6276100 2446 2430 2701 6095;6096 5638 5638 7825 1 IHIDPEIQDGSPTTSR DSKAQAHRIHIDPEIQ DGSPTTSRRPSGTGTG R I H S R R 0 1 0 2 0 1 1 1 1 3 0 0 0 0 2 2 2 0 0 0 0 0 16 0 1764.8642 C9J542;P50479 C9J542 43 58 PDLIM4 PDZ and LIM domain protein 4 yes no 2;3 1.2824E-07 120.24 By MS/MS By MS/MS 2 2 40068000 24950000 15118000 2447 563 2702 6097;6098;6099;6100 5639;5640;5641;5642 5641 1036 4 IHLGSSPK NQGVSEERIHLGSSPK IHLGSSPKKGGNCDLS R I H P K K 0 0 0 0 0 0 0 1 1 1 1 1 0 0 1 2 0 0 0 0 0 0 8 0 837.47085 Q5JW53;Q9H410 Q5JW53 53 60 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.006035 104.42 By MS/MS By MS/MS 1 1 34236000 18180000 16056000 2448 2080 2703 6101;6102 5643;5644;5645;5646 5644 4097;4098 4 IHPMAYQLQLQAASNFKSPVK VPRLYGFKIHPMAYQL SNFKSPVKTIR_____ K I H V K T 3 0 1 0 0 3 0 0 1 1 2 2 1 1 2 2 0 0 1 1 0 0 21 1 2370.2518 Q5SRQ6;P67870 Q5SRQ6 211 231 CSNK2B Casein kinase II subunit beta yes no 3 2.7343E-06 84.249 By MS/MS By MS/MS 2 2 16632000 11330000 5302300 2449 1808 2704;2705 6103;6104;6105;6106 5647;5648;5649 5649 232 3378;3379 3 IHRASDPGLPAEEPK GRFHLPPRIHRASDPG GLPAEEPKEKSSRKVA R I H P K E 2 1 0 1 0 0 2 1 1 1 1 1 0 0 3 1 0 0 0 0 0 0 15 1 1615.8318 F8VPD4;P27708 F8VPD4 1792 1806 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 2;3 0.00032388 84.436 By MS/MS By MS/MS 2 2 70151000 33569000 36583000 2450 910 2706 6107;6108;6109;6110 5650;5651;5652 5650 1629 3 IHRASDPGLPAEEPKEK GRFHLPPRIHRASDPG PAEEPKEKSSRKVAEP R I H E K S 2 1 0 1 0 0 3 1 1 1 1 2 0 0 3 1 0 0 0 0 0 0 17 2 1872.9694 F8VPD4;P27708 F8VPD4 1792 1808 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 3;4 7.4367E-06 95.9 By MS/MS By MS/MS 2 2 283160000 135810000 147340000 2451 910 2707 6111;6112;6113;6114 5653;5654;5655 5653 1629 3 IHSPIIR LVVVKEEKIHSPIIRS KIHSPIIRSEPFSPSL K I H I R S 0 1 0 0 0 0 0 0 1 3 0 0 0 0 1 1 0 0 0 0 0 0 7 0 834.50757 O60885 O60885 1115 1121 BRD4 Bromodomain-containing protein 4 yes yes 2 0.0044625 114.89 By MS/MS By MS/MS 1 1 140370000 71724000 68645000 2452 1424 2708 6115;6116 5656;5657 5656 2626 2 IHSPIPDMSK TSPSTATKIHSPIPDM SPIPDMSKFATGITPF K I H S K F 0 0 0 1 0 0 0 0 1 2 0 1 1 0 2 2 0 0 0 0 0 0 10 0 1123.5696 Q6NZY4 Q6NZY4 656 665 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 2;3 1.3303E-13 166.29 By MS/MS By MS/MS 3 3 90933000 50470000 40463000 2453 2149 2709;2710 6117;6118;6119;6120;6121;6122 5658;5659;5660;5661;5662 5660 290 4278 5 IIALQNGER LTEQQHQKIIALQNGE IALQNGERSLKSPIQS K I I E R S 1 1 1 0 0 1 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1012.5665 Q9C0J9 Q9C0J9 110 118 BHLHE41 Class E basic helix-loop-helix protein 41 yes yes 2 0.0073662 104.37 By MS/MS By matching 1 1 2408700 1197300 1211400 2454 2622 2711 6123;6124 5663 5663 1 IIAPPER APSTMKIKIIAPPERK KIIAPPERKYSVWIGG K I I E R K 1 1 0 0 0 0 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 7 0 794.46504 P63261;P60709;Q562R1;P63267;P68133;P68032;P62736;A6NL76 P63261 329 335 ACTG1;ACTB;ACTBL2;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 2 0.021819 97.473 By MS/MS By matching 1 1 25157000 12573000 12584000 2455 1785;1799 2712 6125;6126 5664 5664 1 IIASLADRPYEEPPQKPPR QLLGHRKRIIASLADR EPPQKPPRFSQLRCQD R I I P R F 2 2 0 1 0 1 2 0 0 2 1 1 0 0 5 1 0 0 1 0 0 0 19 2 2176.1641 Q92625 Q92625 825 843 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 3 0.0012494 70.197 By MS/MS By MS/MS 1 2 21364000 8614500 12750000 2456 2430 2713 6127;6128;6129 5665;5666;5667 5666 4885;7826 3 IIEQLSPQAATSR TSLRQINKIIEQLSPQ SPQAATSRDINRKLDS K I I S R D 2 1 0 0 0 2 1 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 13 0 1412.7623 Q03468;D6R9X7 Q03468 153 165 ERCC6 DNA excision repair protein ERCC-6 yes no 2 0.0003411 110.55 By MS/MS 1 3494900 3494900 0 2457 1848 2714 6130 5668 5668 3476 1 IIGEDSPSRLDR LYKGTITRIIGEDSPS DSPSRLDRGREDSLPK R I I D R G 0 2 0 2 0 0 1 1 0 2 1 0 0 0 1 2 0 0 0 0 0 0 12 1 1356.6997 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7;C9JQE8 C9JE98 1236 1247 NCOR2 Nuclear receptor corepressor 2 yes no 2;3 3.6588E-05 119.25 By MS/MS By MS/MS 3 2 44637000 28825000 15812000 2458 552 2715 6131;6132;6133;6134;6135 5669;5670;5671 5670 1017;1018 3 IIGEKSFR LCDFGFARIIGEKSFR IIGEKSFRRSVVGTPA R I I F R R 0 1 0 0 0 0 1 1 0 2 0 1 0 1 0 1 0 0 0 0 0 0 8 1 948.53927 B4DTS2;Q9BZL6;O94806;H0Y5M6;Q15139;F8WBA3 Q15139 726 733 PRKD2;PRKD3;PRKD1 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2;Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1 no no 2 0.0062556 120.63 By MS/MS By MS/MS 1 1 46694000 22009000 24686000 2459 1463;1978;491 2716 6136;6137 5672;5673 5672 924 2 IIISKHDGGSPSIKAK VGSTGVAKIIISKHDG GSPSIKAKVTLQKPGE K I I A K V 1 0 0 1 0 0 0 2 1 4 0 3 0 0 1 3 0 0 0 0 0 0 16 2 1649.9465 Q15648 Q15648 1392 1407 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 3 0.025367 48.677 By matching By MS/MS 1 1 3711800 1283000 2428800 2460 1998 2717 6138;6139 5674 5674 1 IILDLISESPIK DRVVECIKIILDLISE LISESPIKGRAQPYDP K I I I K G 0 0 0 1 0 0 1 0 0 4 2 1 0 0 1 2 0 0 0 0 0 0 12 0 1339.7963 P61978;Q5T6W2 P61978 208 219 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 3.5682E-09 143.76 By MS/MS By MS/MS 1 1 8715100 4539600 4175600 2461 1788 2718 6140;6141 5675;5676 5675 3364;3365 2 IILDLISESPIKGR DRVVECIKIILDLISE SESPIKGRAQPYDPNF K I I G R A 0 1 0 1 0 0 1 1 0 4 2 1 0 0 1 2 0 0 0 0 0 0 14 1 1552.9188 P61978;Q5T6W2 P61978 208 221 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2;3 3.3947E-14 143.93 By MS/MS By MS/MS 2 2 65573000 35782000 29790000 2462 1788 2719 6142;6143;6144;6145 5677;5678;5679;5680 5677 3364;3365 4 IILNSHSPAGSAAISQQDFHPK DFLFRASRIILNSHSP SQQDFHPKCSTANSRL R I I P K C 3 0 1 1 0 2 0 1 2 3 1 1 0 1 2 4 0 0 0 0 0 0 22 0 2317.1815 Q9UPU5 Q9UPU5 1606 1627 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 3 1.2624E-09 96.234 By MS/MS By MS/MS 1 1 9543100 5075900 4467200 2463 2871 2720 6146;6147 5681;5682 5681 5928;5929 2 IINEPTAAAIAY IAGLNVLRIINEPTAA PTAAAIAY________ R I I A Y - 4 0 1 0 0 0 1 0 0 3 0 0 0 0 1 0 1 0 1 0 0 0 12 0 1245.6605 E9PK54 E9PK54 172 183 HSPA8 yes yes 2 0.0053663 84.615 By MS/MS By MS/MS 1 1 11409000 5870800 5537800 2464 812 2721 6148;6149 5683;5684 5683 2 IINEPTAAAIAYGLDKK IAGLNVLRIINEPTAA IAYGLDKKVGAERNVL R I I K K V 4 0 1 1 0 0 1 1 0 3 1 2 0 0 1 0 1 0 1 0 0 0 17 1 1786.9829 P11142;E9PKE3;E9PN89;P54652;E9PI65 P11142 172 188 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 3 2.5348E-05 84.195 By MS/MS By MS/MS 1 1 5902400 3269800 2632700 2465 1560 2722 6150;6151 5685;5686 5686 2 IINEPTAAAIAYGLDR IAGLNVLRIINEPTAA AIAYGLDRTGKGERNV R I I D R T 4 1 1 1 0 0 1 1 0 3 1 0 0 0 1 0 1 0 1 0 0 0 16 0 1686.8941 P17066;A0A0G2JIW1;P0DMV9;P0DMV8 A0A0G2JIW1 173 188 HSPA6;HSPA1B;HSPA1A Heat shock 70 kDa protein 6;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 0.00012786 111.79 By MS/MS By MS/MS 2 2 10625000 6641400 3983300 2466 320;1590 2723 6152;6153;6154;6155 5687;5688;5689;5690 5687 4 IINLGPVHPGPLSPEPQPMGVR CPRPYCKRIINLGPVH EPQPMGVRVICGHCKN R I I V R V 0 1 1 0 0 1 1 3 1 2 2 0 1 0 6 1 0 0 0 2 0 0 22 0 2304.2413 Q86T03 Q86T03 150 171 TMEM55B Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase yes yes 3 0.00015586 73.11 By MS/MS By MS/MS 2 2 32865000 20163000 12702000 2467 2227 2724;2725 6156;6157;6158;6159 5691;5692;5693;5694 5694 4465 4 IIPGFMCQGGDFTR YKGSCFHRIIPGFMCQ CQGGDFTRHNGTGGKS R I I T R H 0 1 0 1 1 1 0 3 0 2 0 0 1 2 1 0 1 0 0 0 0 0 14 0 1597.7381 P62937;F8WE65;C9J5S7;P0DN26;A0A0H2UH34;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284 P62937 56 69 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 2 0.0021315 88.187 By MS/MS By MS/MS 2 2 29676000 17664000 12012000 2468 1806 2726;2727 6160;6161;6162;6163 5695;5696;5697 5695 231 3 IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK TIGEILKKIIPTLEEG CLNYQHYKGSDFDCEL K I I Y K G 2 0 1 1 1 3 4 1 1 2 6 1 0 0 4 3 3 0 2 1 0 0 36 0 4054.0245 P61978 P61978 104 139 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 4 0.00097691 48.106 By MS/MS 1 51454000 51454000 0 2469 1788 2728 6164 5698 5698 3366 1 IIQLLDDYPK WKSNYFLKIIQLLDDY QLLDDYPKCFIVGADN K I I P K C 0 0 0 2 0 1 0 0 0 2 2 1 0 0 1 0 0 0 1 0 0 0 10 0 1216.6703 F8VS58;F8VQY6;F8VRK7;G3V210;F8VZS0;F8VU65;F8VWS0;Q8NHW5;P05388 F8VS58 17 26 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2 9.1242E-05 119.62 By MS/MS By MS/MS 1 1 6084500 3624100 2460400 2470 913 2729 6165;6166 5699;5700 5699 2 IIQQEYEAR ENLQKTSKIIQQEYEA IQQEYEARTGRTCKPP K I I A R T 1 1 0 0 0 2 2 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 9 0 1148.5826 O60347 O60347 362 370 TBC1D12 TBC1 domain family member 12 yes yes 2 0.013452 73.248 By MS/MS 1 0 0 0 2471 1408 2730 6167 5701 5701 7527 1 IIRGIDKGR GEKPKEEKIIRGIDKG IRGIDKGRVRAAVDKK K I I G R V 0 2 0 1 0 0 0 2 0 3 0 1 0 0 0 0 0 0 0 0 0 0 9 2 1026.6298 Q9BV00;P29536 Q9BV00 126 134 LMOD1 Leiomodin-1 yes no 2 0.030876 47.849 By MS/MS 1 0 0 0 2472 1647 2731 6168 5702 5702 1 IISIFSGTEK EEKKPRHKIISIFSGT SIFSGTEKGSKKKEKE K I I E K G 0 0 0 0 0 0 1 1 0 3 0 1 0 1 0 2 1 0 0 0 0 0 10 0 1093.6019 Q13177 Q13177 53 62 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 2 0.0017754 95.618 By MS/MS By MS/MS 1 1 27941000 16763000 11178000 2473 1901 2732 6169;6170 5703;5704 5703 3635 2 IISNASCTTNCLAPLAK EKYDNSLKIISNASCT NCLAPLAKVIHDNFGI K I I A K V 3 0 2 0 2 0 0 0 0 2 2 1 0 0 1 2 2 0 0 0 0 0 17 0 1832.9125 P04406;E7EUT5 P04406 146 162 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 1.6481E-36 167.22 By MS/MS By MS/MS 3 3 94760000 48662000 46098000 2474 1522 2733;2734 6171;6172;6173;6174;6175;6176 5705;5706;5707;5708;5709;5710 5706 2807 6 IITLTGPTNAIFK SEGNCPERIITLTGPT GPTNAIFKAFAMIIDK R I I F K A 1 0 1 0 0 0 0 1 0 3 1 1 0 1 1 0 3 0 0 0 0 0 13 0 1387.8075 Q15365 Q15365 58 70 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.0071009 76.143 By MS/MS 1 1058500 0 1058500 2475 1984 2735 6177 5711;5712 5712 2 IIVELGASVVTVSEAIISVK GPDGSISRIIVELGAS SEAIISVKDIGVISLP R I I V K D 2 0 0 0 0 0 2 1 0 4 1 1 0 0 0 3 1 0 0 5 0 0 20 0 2026.1926 E9PJC5;A0A0G2JNJ8;A0A0G2JN42;Q6W4X9 E9PJC5 121 140 MUC6 Mucin-6 yes no 2 6.264E-08 92.265 By MS/MS 1 14367000 14367000 0 2476 326 2736 6178 5713 5713 1 IIYDSDSESEETLQVK KQPSKKKRIIYDSDSE SEETLQVKNAKKPPEK R I I V K N 0 0 0 2 0 1 3 0 0 2 1 1 0 0 0 3 1 0 1 1 0 0 16 0 1854.8735 P35251;D6RAD2;E0CX09 P35251 65 80 RFC1 Replication factor C subunit 1 yes no 2;3 6.4246E-24 151.8 By MS/MS By MS/MS 3 3 175510000 101740000 73768000 2477 1669 2737;2738 6179;6180;6181;6182;6183;6184 5714;5715;5716;5717;5718;5719;5720;5721;5722;5723 5722 3070;3071;6696;7592 10 IIYDSDSESEETLQVKNAK KQPSKKKRIIYDSDSE TLQVKNAKKPPEKLPV R I I A K K 1 0 1 2 0 1 3 0 0 2 1 2 0 0 0 3 1 0 1 1 0 0 19 1 2168.0485 P35251;D6RAD2;E0CX09 P35251 65 83 RFC1 Replication factor C subunit 1 yes no 2;3 8.5216E-05 80.014 By MS/MS By MS/MS 2 2 39847000 21152000 18695000 2478 1669 2739 6185;6186;6187;6188 5724;5725;5726;5727 5724 3070;3071;6696;7592 3 IIYEPHPQLTR LSPSWNPKIIYEPHPQ EPHPQLTRNLPEIAPS K I I T R N 0 1 0 0 0 1 1 0 1 2 1 0 0 0 2 0 1 0 1 0 0 0 11 0 1365.7405 Q96BY7 Q96BY7 262 272 ATG2B Autophagy-related protein 2 homolog B yes yes 2;3 0.00014163 109.16 By MS/MS By MS/MS 2 2 22075000 10457000 11618000 2479 2463 2740 6189;6190;6191;6192 5728;5729;5730;5731 5729 7836 4 IIYGGSVTGATCK DAVAQSTRIIYGGSVT SVTGATCKELASQPDV R I I C K E 1 0 0 0 1 0 0 3 0 2 0 1 0 0 0 1 2 0 1 1 0 0 13 0 1325.6649 P60174 P60174 244 256 TPI1 Triosephosphate isomerase yes yes 2 0.0013433 95.195 By MS/MS By MS/MS 2 2 20390000 11749000 8641300 2480 1781 2741;2742 6193;6194;6195;6196 5732;5733;5734 5732 3355;7652 2 IIYQEFNSDIIDILRTPENVTQSK LTVLAVNRIIYQEFNS PENVTQSKTSVFQTEI R I I S K T 0 1 2 2 0 2 2 0 0 5 1 1 0 1 1 2 2 0 1 1 0 0 24 1 2835.4654 Q99698 Q99698 2654 2677 LYST Lysosomal-trafficking regulator yes yes 3 0.026331 43.799 By MS/MS 1 0 0 0 2481 2556 2743 6197 5735 5735 7863 1 IKASQSAGDINTIYQPPEPR SGVSRQVRIKASQSAG IYQPPEPRSRHLSVSS R I K P R S 2 1 1 1 0 2 1 1 0 3 0 1 0 0 3 2 1 0 1 0 0 0 20 1 2184.1175 J3KRN4;J3QRB6;Q99759 J3KRN4 142 161 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 3 0.0010186 67.251 By MS/MS By matching 1 1 3531600 2716800 814820 2482 1240 2744 6198;6199 5736 5736 2246;7477 1 IKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSK PAVPPGVRIKEEPVSE SPSGLHSKLANGLPLG R I K S K L 1 0 0 2 0 1 12 2 1 1 1 2 1 0 3 4 1 0 0 1 0 0 33 1 3699.5741 A0A0C4DH01;Q9NVU0 A0A0C4DH01 461 493 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes no 3;4 0.00077411 51.236 By MS/MS By MS/MS 2 2 142550000 86759000 55796000 2483 303 2745 6200;6201;6202;6203 5737;5738;5739 5738 549 3 IKEEVLSESEAENQQAGAAALAPEIVIK EASNKPVKIKEEVLSE LAPEIVIKVEKLDPEL K I K I K V 6 0 1 0 0 2 6 1 0 3 2 2 0 0 1 2 0 0 0 2 0 0 28 1 2936.5342 Q9UJX5 Q9UJX5 771 798 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 3 0.015053 42.355 By matching By MS/MS 1 1 18667000 9399200 9267500 2484 2822 2746 6204;6205 5740 5740 5801 1 IKGSSPGIQDTLEAEDGAFETDEAPEDR PEEPDPKKIKGSSPGI TDEAPEDRILSCRKAG K I K D R I 3 1 0 4 0 1 5 3 0 2 1 1 0 1 2 2 2 0 0 0 0 0 28 1 2976.3472 Q9UNX4 Q9UNX4 237 264 WDR3 WD repeat-containing protein 3 yes yes 3 0.00018695 62.57 By MS/MS By MS/MS 1 1 41535000 22307000 19228000 2485 2865 2747 6206;6207 5741;5742 5741 5903;5904 2 IKKSTYFSDEEELSD SDDSRRPRIKKSTYFS SDEEELSD________ R I K S D - 0 0 0 2 0 0 3 0 0 1 1 2 0 1 0 3 1 0 1 0 0 0 15 2 1789.8258 G3V1V1;Q8TBF4 G3V1V1 162 176 ZCRB1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 yes no 2 0.002164 82.663 By MS/MS By MS/MS 1 1 27373000 11998000 15375000 2486 963 2748 6208;6209 5743;5744 5743 1755;1756 2 IKLGDSSNYYYISPFCRYR QSKSCKHRIKLGDSSN ISPFCRYRITSVCNFF R I K Y R I 0 2 1 1 1 0 0 1 0 2 1 1 0 1 1 3 0 0 4 0 0 0 19 2 2401.1525 Q96QF0;H3BNG1;F8VTR6;H0YD03 Q96QF0 408 426 RAB3IP Rab-3A-interacting protein yes no 3 0.016354 40.085 By matching By MS/MS 1 1 26323000 16682000 9641100 2487 2531 2749 6210;6211 5745 5745 5108;7852;7853 1 IKLQTPNTFPK AETPQAKKIKLQTPNT QTPNTFPKRKKGEKRA K I K P K R 0 0 1 0 0 1 0 0 0 1 1 2 0 1 2 0 2 0 0 0 0 0 11 1 1285.7394 A0A0A0MRM9;Q14978 A0A0A0MRM9 612 622 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0036947 93.228 By MS/MS By MS/MS 1 1 12540000 6814400 5725600 2488 191 2750 6212;6213 5746;5747 5746 6271;6272 2 IKNENTEGSPQEDGVELEGLK AEKKNKKKIKNENTEG GVELEGLKQRLEKKQK K I K L K Q 0 0 2 1 0 1 5 3 0 1 2 2 0 0 1 1 1 0 0 1 0 0 21 1 2285.1023 P11388 P11388 1239 1259 TOP2A DNA topoisomerase 2-alpha yes yes 3 2.4306E-09 99.378 By MS/MS By MS/MS 1 1 132370000 70829000 61541000 2489 1565 2751 6214;6215 5748;5749;5750 5750 2872;6668 3 IKNENTEGSPQEDGVELEGLKQR AEKKNKKKIKNENTEG ELEGLKQRLEKKQKRE K I K Q R L 0 1 2 1 0 2 5 3 0 1 2 2 0 0 1 1 1 0 0 1 0 0 23 2 2569.262 P11388 P11388 1239 1261 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.0095365 58.366 By MS/MS By matching 1 1 42530000 21561000 20969000 2490 1565 2752 6216;6217 5751 5751 2872;6668 1 IKPDEDLPSPGAR PMHNKRSKIKPDEDLP DLPSPGARGQQEQPEG K I K A R G 1 1 0 2 0 0 1 1 0 1 1 1 0 0 3 1 0 0 0 0 0 0 13 1 1393.7201 P10071 P10071 437 449 GLI3 Transcriptional activator GLI3;Transcriptional repressor GLI3R yes yes 3 0.0065267 66.826 By MS/MS By MS/MS 1 1 0 0 0 2491 1553 2753 6218;6219 5752;5753 5752 2854 2 IKPNLSSSPR EPEVCPTKIKPNLSSS PNLSSSPRSEETTASS K I K P R S 0 1 1 0 0 0 0 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 10 1 1097.6193 A0A1P0AZG4;A0A1B0GUH9 A0A1P0AZG4 288 297 yes no 3 0.0032806 77.894 By MS/MS By MS/MS 1 1 0 0 0 2492 370 2754 6220;6221 5754;5755 5754 696;697 2 IKPSSSANAIYSLAARPLPVPK GPECDHPKIKPSSSAN ARPLPVPKLPPGEQCE K I K P K L 4 1 1 0 0 0 0 0 0 2 2 2 0 0 4 4 0 0 1 1 0 0 22 2 2279.3002 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 662 683 CBL E3 ubiquitin-protein ligase CBL yes no 3 0.0025838 53.037 By MS/MS 1 2670800 2670800 0 2493 345 2755 6222 5756 5756 7247 1 IKTEPSSPLSDPSDIIR ASPVTEVRIKTEPSSP SDPSDIIRVTVGDAAT R I K I R V 0 1 0 2 0 0 1 0 0 3 1 1 0 0 3 4 1 0 0 0 0 0 17 1 1853.9735 Q9ULJ3 Q9ULJ3 429 445 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2;3 4.2634E-05 92.427 By MS/MS By MS/MS 2 2 34921000 18189000 16732000 2494 2847 2756 6223;6224;6225;6226 5757;5758;5759 5759 5855;5856;7094 3 IKTLHCEGTEINSDDEQESKEVEETATAK IEPFKTKKIKTLHCEG VEETATAKNVLKLLSD K I K A K N 2 0 1 2 1 1 7 1 1 2 1 3 0 0 0 2 4 0 0 1 0 0 29 2 3290.5096 Q9BPX3;H0Y9Z8 Q9BPX3 662 690 NCAPG Condensin complex subunit 3 yes no 4 5.3362E-13 89.803 By MS/MS By MS/MS 1 1 32245000 13651000 18594000 2495 2567 2757 6227;6228 5760;5761 5761 5181;7024 2 ILAPPGGRSSGIW VPKRASARILAPPGGR GGRSSGIW________ R I L I W - 1 1 0 0 0 0 0 3 0 2 1 0 0 0 2 2 0 1 0 0 0 0 13 1 1309.7143 Q9BPU6 Q9BPU6 552 564 DPYSL5 Dihydropyrimidinase-related protein 5 yes yes 2 0.004779 78.098 By MS/MS By MS/MS 1 1 90972000 49242000 41730000 2496 2566 2758 6229;6230 5762;5763 5763 5179;5180 2 ILATDVSSKNTPDSK QAHEVHQKILATDVSS SKNTPDSKKISSRNIN K I L S K K 1 0 1 2 0 0 0 0 0 1 1 2 0 0 1 3 2 0 0 1 0 0 15 1 1574.8152 H0Y8J2;Q03188 H0Y8J2 27 41 CENPC Centromere protein C yes no 2;3 3.6728E-06 114.28 By MS/MS By MS/MS 2 2 39092000 19835000 19257000 2497 1041 2759 6231;6232;6233;6234 5764;5765 5764 6519 2 ILATPPQEDAPSVDIANIR SQIQSKKKILATPPQE SVDIANIRMPSLPSYK K I L I R M 3 1 1 2 0 1 1 0 0 3 1 0 0 0 3 1 1 0 0 1 0 0 19 0 2019.0637 E9PFF2;A0A0B4J1R6;P29401 E9PFF2 284 302 TKT Transketolase yes no 3 0.00065233 74.147 By MS/MS By MS/MS 1 1 3641500 1816000 1825500 2498 256 2760 6235;6236 5766;5767;5768 5767 6293 3 ILCKSPQSDPADTPTNTK TDEKTTKKILCKSPQS ADTPTNTKQRPKRSLK K I L T K Q 1 0 1 2 1 1 0 0 0 1 1 2 0 0 3 2 3 0 0 0 0 0 18 1 1971.9572 P46013 P46013 1857 1874 MKI67 Antigen KI-67 yes yes 3 0.0022174 63.726 By MS/MS By MS/MS 1 1 23525000 12880000 10645000 2499 1704 2761 6237;6238 5769;5770 5770 3145;3146 2 ILDEIEEHNIKIYHLPDAESDEDEDFKEQTR ERERLKKRILDEIEEH EDFKEQTRLLKASIPF R I L T R L 1 1 1 5 0 1 7 0 2 4 2 2 0 1 1 1 1 0 1 0 0 0 31 2 3769.7595 H7C2Y0;B5MCX3;Q15019 H7C2Y0 54 84 SEPT2 Septin-2 yes no 4;5 0.00080567 51.321 By MS/MS By MS/MS 2 2 133150000 80175000 52980000 2500 505 2762 6239;6240;6241;6242 5771;5772;5773 5771 945 3 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR SAPQGTLRILEGPQQS IPPGLRPRFCAFGGNP R I L P R F 1 2 0 0 0 4 1 3 0 3 4 0 0 0 10 4 0 0 0 0 0 0 32 1 3323.8354 O15446 O15446 117 148 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 3;4 0.00026747 57.688 By MS/MS By matching 3 3 65655000 45442000 20213000 2501 1368 2763;2764 6243;6244;6245;6246;6247;6248 5774;5775;5776 5775 2499;2500;2501 3 ILELTPEPDRPR LIQHQDMRILELTPEP TPEPDRPRILPPDQRP R I L P R I 0 2 0 1 0 0 2 0 0 1 2 0 0 0 3 0 1 0 0 0 0 0 12 1 1434.7831 Q14004 Q14004 1242 1253 CDK13 Cyclin-dependent kinase 13 yes yes 2;3 0.00092226 110.51 By MS/MS By MS/MS 2 2 90237000 49484000 40753000 2502 1936 2765 6249;6250;6251;6252 5777;5778;5779;5780 5777 6808 4 ILENSEDSSPECLF KEKMGIFKILENSEDS DSSPECLF________ K I L L F - 0 0 1 1 1 0 3 0 0 1 2 0 0 1 1 3 0 0 0 0 0 0 14 0 1638.7083 A0A0B4J1V9;Q9NRZ9;A0A087WSW7;F6XU50 A0A0B4J1V9 871 884 HELLS Lymphoid-specific helicase yes no 2 0.00081007 98.582 By MS/MS By MS/MS 1 1 23066000 12613000 10453000 2503 258 2766 6253;6254 5781;5782 5782 470;471 2 ILEPDDFLDDLDDEDYEEDTPKRR TNSRARKRILEPDDFL EEDTPKRRGKGKSKGK R I L R R G 0 2 0 8 0 0 4 0 0 1 3 1 0 1 2 0 1 0 1 0 0 0 24 2 2952.3149 J3KMZ8;Q92785 J3KMZ8 157 180 DPF2 Zinc finger protein ubi-d4 yes no 4 0.00015475 63.578 By MS/MS By matching 1 1 11469000 7328000 4141300 2504 1219 2767 6255;6256 5783 5783 7474 1 ILEQQNSSRTLEK ANWEAQQRILEQQNSS NSSRTLEKNKKKGKIF R I L E K N 0 1 1 0 0 2 2 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 13 1 1544.8158 G3V1Q4;E7ES33;E7EPK1;Q16181;Q5JXL7 G3V1Q4 381 393 SEPT7;DKFZp586I031 Septin-7 yes no 2;3 2.6137E-78 212.43 By MS/MS By MS/MS 5 5 703260000 321500000 381760000 2505 714 2768;2769 6257;6258;6259;6260;6261;6262;6263;6264;6265;6266 5784;5785;5786;5787;5788;5789;5790;5791;5792;5793 5786 6 1264;1265;6415 10 ILEQQNSSRTLEKNK ANWEAQQRILEQQNSS SRTLEKNKKKGKIF__ R I L N K K 0 1 2 0 0 2 2 0 0 1 2 2 0 0 0 2 1 0 0 0 0 0 15 2 1786.9537 G3V1Q4;E7ES33;E7EPK1;Q16181;Q5JXL7 G3V1Q4 381 395 SEPT7;DKFZp586I031 Septin-7 yes no 3 0.004192 64.588 By MS/MS By matching 1 1 36812000 22692000 14119000 2506 714 2770 6267;6268 5794 5794 1264;1265;6415 1 ILEYNNENDFLAGSPDAAIDSR HIAVRTGKILEYNNEN PDAAIDSRYSDAWRVH K I L S R Y 3 1 3 3 0 0 2 1 0 2 2 0 0 1 1 2 0 0 1 0 0 0 22 0 2423.1241 A1L020 A1L020 295 316 MEX3A RNA-binding protein MEX3A yes yes 2 0.0066935 54.672 By matching By MS/MS 1 1 16939000 9018800 7920000 2507 390 2771 6269;6270 5795 5795 745 1 ILGDMQPGDYFDLVLFGTR QTKEALLKILGDMQPG DLVLFGTRVQSWKGSL K I L T R V 0 1 0 3 0 1 0 3 0 1 3 0 1 2 1 0 1 0 1 1 0 0 19 0 2156.0612 P19827 P19827 318 336 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes yes 2 0.008247 61.649 By MS/MS By matching 1 1 5471500 3488700 1982800 2508 1606 2772 6271;6272 5796 5796 198 1 ILGEQNESASDEWIVDEAK I L A K 2 0 1 2 0 1 4 1 0 2 1 1 0 0 0 2 0 1 0 1 0 0 19 0 2131.991 REV__O75792 yes yes 2 0.0067115 52.071 By matching By MS/MS 1 1 23830000 10171000 13659000 + 2509 2982 2773 6273;6274 5797 5797 6169;6170 1 ILGQSSPEKK KEKKLKRKILGQSSPE GQSSPEKKIRIENGME K I L K K I 0 0 0 0 0 1 1 1 0 1 1 2 0 0 1 2 0 0 0 0 0 0 10 1 1085.6081 P29374;H7C485 P29374 859 868 ARID4A AT-rich interactive domain-containing protein 4A yes no 2 0.00012878 119.27 By MS/MS By MS/MS 1 1 8156200 4071600 4084700 2510 1646 2774 6275;6276 5798;5799 5798 3037;3038 2 ILGSASPEEEQEKPILDRPTR EYAEARKRILGSASPE PILDRPTRISQPEDSR R I L T R I 1 2 0 1 0 1 4 1 0 2 2 1 0 0 3 2 1 0 0 0 0 0 21 2 2364.2285 Q7Z422 Q7Z422 102 122 SZRD1 SUZ domain-containing protein 1 yes yes 3 0.014244 48.555 By MS/MS By MS/MS 1 1 85528000 53468000 32060000 2511 2215 2775 6277;6278 5800;5801 5800 4418 2 ILIPSDIESSK HKQTKKRRILIPSDIE PSDIESSKSSTRRMKS R I L S K S 0 0 0 1 0 0 1 0 0 3 1 1 0 0 1 3 0 0 0 0 0 0 11 0 1200.6602 A0A087WYW3;P30414 A0A087WYW3 159 169 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.0073906 73.082 By MS/MS By MS/MS 1 1 7020800 2680700 4340100 2512 101 2776 6279;6280 5802;5803 5803 187 2 ILITIVEEVETLR VTVEKVIKILITIVEE VEEVETLRQERLSFSG K I L L R Q 0 1 0 0 0 0 3 0 0 3 2 0 0 0 0 0 2 0 0 2 0 0 13 0 1526.892 Q15149 Q15149 3424 3436 PLEC Plectin yes yes 2 0.0086015 73.499 By MS/MS 1 2035900 0 2035900 2513 1979 2777 6281 5804 5804 1 ILIVTQTPHYMR IDDRDVNKILIVTQTP TQTPHYMRRHPGGDRT K I L M R R 0 1 0 0 0 1 0 0 1 2 1 0 1 0 1 0 2 0 1 1 0 0 12 0 1470.8017 Q6PKG0;A0A0B4J210;E5RH50 Q6PKG0 643 654 LARP1 La-related protein 1 yes no 2 0.025154 73.985 By MS/MS By matching 1 1 4701900 2310400 2391500 2514 2162 2778 6282;6283 5805 5805 1 ILKPASAHSPTQVR YARDMRMKILKPASAH AHSPTQVRSRGKSLSP K I L V R S 2 1 0 0 0 1 0 0 1 1 1 1 0 0 2 2 1 0 0 1 0 0 14 1 1503.8522 Q86V25 Q86V25 294 307 VASH2 Vasohibin-2 yes yes 3 0.004829 62.916 By MS/MS By matching 1 1 11384000 3138100 8246200 2515 2240 2779 6284;6285 5806 5806 4484 1 ILKSPEIQR MINTDLSRILKSPEIQ LKSPEIQRALRAPRKK R I L Q R A 0 1 0 0 0 1 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1082.6448 H3BM89;P36578 H3BM89 198 206 RPL4 60S ribosomal protein L4 yes no 2;3 0.0019908 106.16 By MS/MS By MS/MS 2 2 92039000 49033000 43007000 2516 1113 2780 6286;6287;6288;6289 5807;5808;5809 5807 2040 3 ILLAELEQLK RFLEQQNKILLAELEQ LAELEQLKGQGKSRLG K I L L K G 1 0 0 0 0 1 2 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 10 0 1168.7067 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5 P08670 130 139 VIM Vimentin yes no 2 0.0023938 104.2 By MS/MS By MS/MS 1 1 3948800 2457700 1491000 2517 1546 2781 6290;6291 5810;5811 5810 2 ILLAELEQLKGQGK RFLEQQNKILLAELEQ EQLKGQGKSRLGDLYE K I L G K S 1 0 0 0 0 2 2 2 0 1 4 2 0 0 0 0 0 0 0 0 0 0 14 1 1538.9032 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5 P08670 130 143 VIM Vimentin yes no 3 0.0034822 123.26 By MS/MS By MS/MS 1 1 2329700 1298100 1031600 2518 1546 2782 6292;6293 5812;5813 5813 2 ILLLFGETELSPTATPR HLGVSPSRILLLFGET LSPTATPRTLKLGVAD R I L P R T 1 1 0 0 0 0 2 1 0 1 4 0 0 1 2 1 3 0 0 0 0 0 17 0 1857.0248 Q8NCF5;H3BSZ7 Q8NCF5 304 320 NFATC2IP NFATC2-interacting protein yes no 2 1.8601E-16 137.61 By MS/MS By matching 1 1 6345100 4531400 1813800 2519 2337 2783 6294;6295 5814 5814 6963 1 ILLVDSPGMGNADDEQQEEGTSSK KPTHEDSKILLVDSPG QEEGTSSKQVVKQGLQ K I L S K Q 1 0 1 3 0 2 3 3 0 1 2 1 1 0 1 3 1 0 0 1 0 0 24 0 2519.1333 Q9UKN8 Q9UKN8 606 629 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 2;3 1.3927E-13 97.352 By MS/MS By MS/MS 4 4 211780000 117800000 93988000 2520 2834 2784;2785 6296;6297;6298;6299;6300;6301;6302;6303 5815;5816;5817;5818;5819;5820 5820 369 5834 6 ILMKNVK LPLADQIKILMKNVKV KILMKNVKVMPFANLM K I L V K V 0 0 1 0 0 0 0 0 0 1 1 2 1 0 0 0 0 0 0 1 0 0 7 1 844.52044 A0A0C4DH01;Q9NVU0;H3BNJ0 A0A0C4DH01 248 254 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes no 2 0.026347 44.973 By MS/MS 1 0 0 0 2521 303 2786 6304 5821 5821 1 ILNTSPDGHPYEK CDHNNCGKILNTSPDG PDGHPYEKIHTAEKQY K I L E K I 0 0 1 1 0 0 1 1 1 1 1 1 0 0 2 1 1 0 1 0 0 0 13 0 1469.7151 Q16600 Q16600 187 199 ZNF239 Zinc finger protein 239 yes yes 2 0.001298 101.71 By MS/MS By MS/MS 1 1 6935900 3465700 3470200 2522 2018 2787 6305;6306 5822;5823 5822 3943 2 ILQEKLDQPVSAPPSPR DKLEAEKRILQEKLDQ VSAPPSPRDISMEIDS R I L P R D 1 1 0 1 0 2 1 0 0 1 2 1 0 0 4 2 0 0 0 1 0 0 17 1 1874.0262 Q16204 Q16204 230 246 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2;3 6.0515E-11 124.4 By MS/MS By MS/MS 5 5 142400000 90355000 52047000 2523 2014 2788;2789 6307;6308;6309;6310;6311;6312;6313;6314;6315;6316 5824;5825;5826;5827;5828;5829;5830;5831;5832;5833;5834;5835;5836 5836 3924;3925 13 ILRFNEYVEVTDAQDYDR VAELLARKILRFNEYV TDAQDYDRRADKPWTK K I L D R R 1 2 1 3 0 1 2 0 0 1 1 0 0 1 0 0 1 0 2 2 0 0 18 1 2245.0651 Q8IZ21 Q8IZ21 641 658 PHACTR4 Phosphatase and actin regulator 4 yes yes 3 0.0077269 50.608 By matching By MS/MS 1 1 9601400 3275400 6326000 2524 2291 2790 6317;6318 5837 5837 7791 1 ILRLSTFEK MAFANFRRILRLSTFE LRLSTFEKRKSREYEH R I L E K R 0 1 0 0 0 0 1 0 0 1 2 1 0 1 0 1 1 0 0 0 0 0 9 1 1105.6495 O94804 O94804 9 17 STK10 Serine/threonine-protein kinase 10 yes yes 2 0.002366 126.71 By MS/MS By MS/MS 1 1 15339000 6835300 8504000 2525 1462 2791 6319;6320 5838;5839 5838 2704 2 ILRVEKTGHSGTLDPK EVVAWIRRILRVEKTG HSGTLDPKVTGCLIVC R I L P K V 0 1 0 1 0 0 1 2 1 1 2 2 0 0 1 1 2 0 0 1 0 0 16 2 1749.9737 O60832;H7C2Q9;H7C0M1;C9IYT0 O60832 112 127 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 2 0.017965 62.357 By MS/MS 1 18616000 18616000 0 2526 1423 2792 6321 5840 5840 2621 1 ILSDVTHSAVFGVPASK TQRAGHRRILSDVTHS VFGVPASKSTQLLQAA R I L S K S 2 0 0 1 0 0 0 1 1 1 1 1 0 1 1 3 1 0 0 3 0 0 17 0 1726.9254 Q2M2I8;E9PG46 Q2M2I8 635 651 AAK1 AP2-associated protein kinase 1 yes no 2;3 5.8359E-22 144.08 By MS/MS By MS/MS 2 2 55328000 31794000 23534000 2527 2030 2793 6322;6323;6324;6325 5841;5842;5843;5844 5841 3966;6850 3 ILSEVTPDQSKPEN NRLKSLMKILSEVTPD PDQSKPEN________ K I L E N - 0 0 1 1 0 1 2 0 0 1 1 1 0 0 2 2 1 0 0 1 0 0 14 1 1555.773 O43482 O43482 216 229 OIP5 Protein Mis18-beta yes yes 2 0.0085172 89.992 By MS/MS 1 3210900 3210900 0 2528 1386 2794 6326 5845 5845 6614 1 ILSGVVTK GNVSIRGRILSGVVTK ILSGVVTKMKMQRTIV R I L T K M 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 1 1 0 0 2 0 0 8 0 815.51165 M0QZC5;P62280 M0QZC5 72 79 RPS11 40S ribosomal protein S11 yes no 2 0.026174 79.451 By MS/MS By MS/MS 1 1 3232000 1679100 1552900 2529 1310 2795 6327;6328 5846;5847 5846 2 ILSKLSLPTR AREGASRKILSKLSLP SKLSLPTRAWEPAMKK K I L T R A 0 1 0 0 0 0 0 0 0 1 3 1 0 0 1 2 1 0 0 0 0 0 10 1 1126.7074 A0A0U1RQY8;F5H562;E7ET55;F5H748;B7ZLR4;P35670 A0A0U1RQY8 18 27 ATP7B Copper-transporting ATPase 2;WND/140 kDa yes no 2 0.0080043 75.669 By MS/MS By matching 1 1 3288400 1956600 1331700 2530 346 2796 6329;6330 5848 5848 638 1 ILSLQASPTQK QITLPGNKILSLQASP LQASPTQKNRIKENVT K I L Q K N 1 0 0 0 0 2 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 11 0 1184.6765 J3KTH2;Q92750 J3KTH2 594 604 TAF4B Transcription initiation factor TFIID subunit 4B yes no 2 1.8468E-06 147.26 By MS/MS By MS/MS 1 1 4906300 2600000 2306400 2531 1246 2797 6331;6332 5849;5850 5849 2257 2 ILSLSEEGSLER NSPQALKKILSLSEEG SEEGSLERHKKQAEDT K I L E R H 0 1 0 0 0 0 3 1 0 1 3 0 0 0 0 3 0 0 0 0 0 0 12 0 1331.6933 Q9Y4G8;H0Y8H7 Q9Y4G8 1087 1098 RAPGEF2 Rap guanine nucleotide exchange factor 2 yes no 2 0.0034893 81.565 By MS/MS By MS/MS 1 1 3018900 1995900 1023000 2532 2920 2798 6333;6334 5851;5852 5852 6073 2 ILSMFGSTYICEQLFSIMK KYKHHCAKILSMFGST EQLFSIMKLSKTKYCS K I L M K L 0 0 0 0 1 1 1 1 0 3 2 1 2 2 0 3 1 0 1 0 0 0 19 0 2267.104 A0A0A0MSY2;Q86UP8;Q6EKJ0 A0A0A0MSY2 908 926 GTF2IRD2;GTF2IRD2B General transcription factor II-I repeat domain-containing protein 2A;General transcription factor II-I repeat domain-containing protein 2B yes no 2 0.028995 45.915 By MS/MS 1 0 0 0 2533 230 2799 6335 5853 5853 7209 1 ILSNEYEEKYDLSR PKKKAQDKILSNEYEE EEKYDLSRPTASQLED K I L S R P 0 1 1 1 0 0 3 0 0 1 2 1 0 0 0 2 0 0 2 0 0 0 14 1 1757.8472 Q76M96 Q76M96 501 514 CCDC80 Coiled-coil domain-containing protein 80 yes yes 2 0.0024375 75.376 By MS/MS 1 0 0 0 2534 2195 2800 6336 5854 5854 4371;4372;7766;7767 1 ILSPSMASK LRDPQTHRILSPSMAS LSPSMASKLEAPFTQD R I L S K L 1 0 0 0 0 0 0 0 0 1 1 1 1 0 1 3 0 0 0 0 0 0 9 0 932.5001 Q9Y6A5;Q8IX09;C9JWI7;E7EMT0;C9JA91 Q9Y6A5 69 77 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 yes no 2 0.0039669 107.11 By MS/MS 1 14020000 14020000 0 2535 2944 2801 6337 5855 5855 6115 1 ILSQSTDSLNMR ESPLGLRRILSQSTDS STDSLNMRNRTLSVES R I L M R N 0 1 1 1 0 1 0 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 12 0 1363.6766 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 215 226 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 5.4572E-09 131.06 By MS/MS By MS/MS 4 4 182470000 100700000 81768000 2536 2450 2802;2803;2804 6338;6339;6340;6341;6342;6343;6344;6345 5856;5857;5858;5859;5860;5861;5862 5861 328 4931;4932;4933;6990 7 ILTFDQLALDSPK RILRAGGKILTFDQLA QLALDSPKGCGTVLLS K I L P K G 1 0 0 2 0 1 0 0 0 1 3 1 0 1 1 1 1 0 0 0 0 0 13 0 1459.7922 F8VUA6;G3V203;H0YHA7;J3QQ67;Q07020 F8VUA6 68 80 RPL18 60S ribosomal protein L18 yes no 2 0.0023428 97.456 By MS/MS By MS/MS 1 1 2457400 1256300 1201000 2537 918 2805 6346;6347 5863;5864 5864 2 ILVPKSPVK DLAKSGIKILVPKSPV LVPKSPVKSRTAVDGF K I L V K S 0 0 0 0 0 0 0 0 0 1 1 2 0 0 2 1 0 0 0 2 0 0 9 1 979.643 Q9Y232 Q9Y232 196 204 CDYL Chromodomain Y-like protein yes yes 2 0.012445 75.043 By matching By MS/MS 1 1 174100000 96118000 77980000 2538 2882 2806 6348;6349 5865 5865 6013 1 ILVPKSPVKSR DLAKSGIKILVPKSPV PKSPVKSRTAVDGFQS K I L S R T 0 1 0 0 0 0 0 0 0 1 1 2 0 0 2 2 0 0 0 2 0 0 11 2 1222.7761 Q9Y232 Q9Y232 196 206 CDYL Chromodomain Y-like protein yes yes 3 5.8901E-05 116.98 By MS/MS By MS/MS 1 1 22231000 12590000 9640400 2539 2882 2807 6350;6351 5866;5867 5866 6013;6014 2 IMATPEQVGK RKMPFTEKIMATPEQV ATPEQVGKMKAIVEKL K I M G K M 1 0 0 0 0 1 1 1 0 1 0 1 1 0 1 0 1 0 0 1 0 0 10 0 1072.5587 B1AHC9;P12956 B1AHC9 402 411 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.022885 77.318 By matching By MS/MS 1 1 26746000 13548000 13198000 2540 451 2808 6352;6353 5868 5868 1 IMDPNIVGSEHYDVAR DPLDSTSRIMDPNIVG SEHYDVARGVQKILQD R I M A R G 1 1 1 2 0 0 1 1 1 2 0 0 1 0 1 1 0 0 1 2 0 0 16 0 1814.8621 P06576;H0YH81 P06576 407 422 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 3 0.0041875 63.709 By MS/MS 1 1163500 1163500 0 2541 1531 2809 6354 5869 5869 1 IMGPNYTPGKK VSTGLKVRIMGPNYTP PNYTPGKKEDLYLKPI R I M K K E 0 0 1 0 0 0 0 2 0 1 0 2 1 0 2 0 1 0 1 0 0 0 11 1 1204.6274 P13639 P13639 429 439 EEF2 Elongation factor 2 yes yes 2 0.019958 85.42 By MS/MS By matching 1 1 17385000 8645200 8739600 2542 1575 2810 6355;6356 5870 5870 1 IMNVIGEPIDER VGPETLGRIMNVIGEP IGEPIDERGPIKTKQF R I M E R G 0 1 1 1 0 0 2 1 0 3 0 0 1 0 1 0 0 0 0 1 0 0 12 0 1384.7021 P06576;H0YH81;F8W079 P06576 144 155 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 0.014221 69.979 By MS/MS 1 1774800 0 1774800 2543 1531 2811 6357 5871 5871 1 IMSCSPDTQCSR LLKKQVVRIMSCSPDT SPDTQCSRDHSMEDPD R I M S R D 0 1 0 1 2 1 0 0 0 1 0 0 1 0 1 3 1 0 0 0 0 0 12 0 1440.5796 Q9C0C9;K7EQ12 Q9C0C9 397 408 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 2 0.0037762 79.614 By MS/MS By matching 1 1 5668800 2838200 2830700 2544 2617 2812 6358;6359 5872 5872 5313 1 IMSQSQVSKGVDFESSEDDDDDPFMNTSSLRR WSSTSSSKIMSQSQVS MNTSSLRRNRR_____ K I M R R N 0 2 1 6 0 2 2 1 0 1 1 1 2 2 1 7 1 0 0 2 0 0 32 2 3621.5835 F8W7U8;P49959 F8W7U8 673 704 MRE11A Double-strand break repair protein MRE11A yes no 4 0.00050331 53.844 By MS/MS 1 6954900 0 6954900 2545 940 2813 6360 5873 5873 1703;1704 1 INEEFKNNK ALEAARIKINEEFKNN NEEFKNNKSETSSKKI K I N N K S 0 0 3 0 0 0 2 0 0 1 0 2 0 1 0 0 0 0 0 0 0 0 9 1 1134.5669 D6RBV5;Q5U5X0 D6RBV5 36 44 LYRM7 Complex III assembly factor LYRM7 yes no 2 0.0088632 61.999 By MS/MS By matching 1 1 1163600 629940 533640 2546 663 2814 6361;6362 5874 5874 1 INEELESQYQQSMDSK RTGEEDKKINEELESQ YQQSMDSKLSGRYRRH K I N S K L 0 0 1 1 0 3 3 0 0 1 1 1 1 0 0 3 0 0 1 0 0 0 16 0 1927.8469 O00193;E9PM92;E9PRZ9 O00193 76 91 SMAP;C11orf58 Small acidic protein yes no 2 4.4806E-05 108.17 By MS/MS By matching 1 1 6431700 4429200 2002500 2547 1324 2815 6363;6364 5875 5875 7496 1 INEILSNALK GSGMNMGRINEILSNA EILSNALKRGEIIAKQ R I N L K R 1 0 2 0 0 0 1 0 0 2 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1113.6394 A0A087X0X3;P52272;M0R019 A0A087X0X3 372 381 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.001719 106.68 By MS/MS By matching 1 1 2518400 1159100 1359200 2548 135 2816 6365;6366 5876 5876 1 INEMSKEVTK LEEDKDKKINEMSKEV EMSKEVTKLKEALNSL K I N T K L 0 0 1 0 0 0 2 0 0 1 0 2 1 0 0 1 1 0 0 1 0 0 10 1 1177.6013 Q9P0K7 Q9P0K7 884 893 RAI14 Ankycorbin yes yes 2 0.016805 51.949 By MS/MS 1 0 0 0 2549 2773 2817 6367 5877 5877 364 1 INFDVNGYIVGANIETYLLEK SRFGKFIRINFDVNGY IETYLLEKSRAIRQAK R I N E K S 1 0 3 1 0 0 2 2 0 3 2 1 0 1 0 0 1 0 2 2 0 0 21 0 2384.2264 P35579 P35579 241 261 MYH9 Myosin-9 yes yes 2 0.027071 49.559 By MS/MS 1 3042900 0 3042900 2550 1670 2818 6368 5878 5878 1 INHTVILDDPFDDPPDLLIPDRSPEPTR FVPYQDIRINHTVILD DRSPEPTREQLDSGRI R I N T R E 0 2 1 6 0 0 1 0 1 3 3 0 0 1 6 1 2 0 0 1 0 0 28 1 3196.6041 Q8WUA2 Q8WUA2 156 183 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 3;4 6.304E-43 134.28 By MS/MS By MS/MS 2 2 103150000 78684000 24462000 2551 2398 2819 6369;6370;6371;6372 5879;5880;5881;5882 5879 4792 4 INHTVILDDPFDDPPDLLIPDRSPEPTREQLDSGR FVPYQDIRINHTVILD REQLDSGRIGADEEID R I N G R I 0 3 1 7 0 1 2 1 1 3 4 0 0 1 6 2 2 0 0 1 0 0 35 2 3981.9708 Q8WUA2 Q8WUA2 156 190 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 4 0.0042241 42.319 By MS/MS By matching 1 1 29302000 26140000 3161800 2552 2398 2820 6373;6374 5883 5883 4792 1 INPPSSGGTSSSPIK NRRQKEKRINPPSSGG GTSSSPIKAIFPSPTS R I N I K A 0 0 1 0 0 0 0 2 0 2 0 1 0 0 3 5 1 0 0 0 0 0 15 0 1427.7256 A0A0C4DG88;P14859;A0A0A0MT46 A0A0C4DG88 345 359 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 2 1.7822E-24 155.37 By MS/MS By MS/MS 1 1 44092000 21893000 22199000 2553 285 2821 6375;6376 5884;5885;5886;5887 5887 506 4 INQEMQNKISSLRNELEHLQYK SGPGEELKINQEMQNK ELEHLQYKVLQERENY K I N Y K V 0 1 3 0 0 3 3 0 1 2 3 2 1 0 0 2 0 0 1 0 0 0 22 2 2714.381 Q8IWZ6 Q8IWZ6 334 355 BBS7 Bardet-Biedl syndrome 7 protein yes yes 3 0.006274 47.688 By matching By MS/MS 1 1 33841000 19572000 14269000 2554 2273 2822 6377;6378 5888 5888 306 4567;4568 1 INSDDSNLYLTASK RRIGDVVRINSDDSNL NLYLTASKKKPTCC__ R I N S K K 1 0 2 2 0 0 0 0 0 1 2 1 0 0 0 3 1 0 1 0 0 0 14 0 1539.7417 C9JY26;Q9BZG1 C9JY26 239 252 RAB34 Ras-related protein Rab-34 yes no 2 4.4672E-15 146.07 By MS/MS By MS/MS 1 1 18370000 10500000 7870800 2555 617 2823 6379;6380 5889;5890 5889 7327 2 INSLTFK KGKKAFERINSLTFKK RINSLTFKKSLDMKAR R I N F K K 0 0 1 0 0 0 0 0 0 1 1 1 0 1 0 1 1 0 0 0 0 0 7 0 821.4647 K7ESB7;Q96HP0 K7ESB7 595 601 DOCK6 Dedicator of cytokinesis protein 6 yes no 2 0.021185 86.898 By MS/MS By MS/MS 1 1 3614300 1992700 1621700 2556 1291 2824 6381;6382 5891;5892 5892 2321 2 IPAKLSPTQLR SGQETFWRIPAKLSPT KLSPTQLRRAAASLSQ R I P L R R 1 1 0 0 0 1 0 0 0 1 2 1 0 0 2 1 1 0 0 0 0 0 11 1 1222.7398 Q9UNS1 Q9UNS1 1082 1092 TIMELESS Protein timeless homolog yes yes 2;3 0.0022026 86.114 By MS/MS By MS/MS 2 2 19066000 11414000 7651800 2557 2863 2825 6383;6384;6385;6386 5893;5894;5895 5893 5901 2 IPAMTIAK EIIKRTLKIPAMTIAK IPAMTIAKNAGVEGSL K I P A K N 2 0 0 0 0 0 0 0 0 2 0 1 1 0 1 0 1 0 0 0 0 0 8 0 843.48881 P10809 P10809 474 481 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.028792 76.774 By matching By MS/MS 1 1 5993900 2938000 3055900 2558 1557 2826 6387;6388 5896 5896 1 IPCESPPLEVVDTTASTKR LTAGKATKIPCESPPL DTTASTKRHLRTRVQK K I P K R H 1 1 0 1 1 0 2 0 0 1 1 1 0 0 3 2 3 0 0 2 0 0 19 1 2099.0569 P46013 P46013 2704 2722 MKI67 Antigen KI-67 yes yes 3 0.000182 74.519 By MS/MS 1 3388800 0 3388800 2559 1704 2827 6389 5897 5897 3147 1 IPGGNIYISPLKSPYK KFPSSPLRIPGGNIYI SPLKSPYKISEGLPTP R I P Y K I 0 0 1 0 0 0 0 2 0 3 1 2 0 0 3 2 0 0 2 0 0 0 16 1 1745.9716 P06400 P06400 799 814 RB1 Retinoblastoma-associated protein yes yes 2;3 0.020816 51.286 By matching By MS/MS 1 2 3472000 1870900 1601100 2560 1530 2828;2829 6390;6391;6392 5898;5899 5898 7549 2 IPGTPGAGGRLSPENNQVLTK ANSTAVVKIPGTPGAG ENNQVLTKKKLQDLVR K I P T K K 1 1 2 0 0 1 1 4 0 1 2 1 0 0 3 1 2 0 0 1 0 0 21 1 2105.1229 Q16514 Q16514 40 60 TAF12 Transcription initiation factor TFIID subunit 12 yes yes 3 0.020969 42.981 By matching By MS/MS 1 1 46623000 25611000 21012000 2561 2017 2830 6393;6394 5900 5900 3942 1 IPMPPSSPQPR RSWQPVSRIPMPPSSP PPSSPQPRGAPRQRPI R I P P R G 0 1 0 0 0 1 0 0 0 1 0 0 1 0 5 2 0 0 0 0 0 0 11 0 1205.6227 Q8WUF5 Q8WUF5 352 362 PPP1R13L RelA-associated inhibitor yes yes 2 0.0014859 97.214 By MS/MS By MS/MS 2 2 13069000 5379000 7690100 2562 2400 2831;2832 6395;6396;6397;6398 5901;5902;5903;5904 5901 4799;4800 4 IPNYQLSPTK SNTLAKMRIPNYQLSP NYQLSPTKLPSINKSK R I P T K L 0 0 1 0 0 1 0 0 0 1 1 1 0 0 2 1 1 0 1 0 0 0 10 0 1159.6237 A0A0C4DG07;O60934 A0A0C4DG07 344 353 NBN Nibrin yes no 3 0.02125 52.49 By MS/MS 1 5211900 0 5211900 2563 273 2833 6399 5905 5905 490;6298;7220 0 IPNYQLSPTKLPSINK SNTLAKMRIPNYQLSP TKLPSINKSKDRASQQ R I P N K S 0 0 2 0 0 1 0 0 0 2 2 2 0 0 3 2 1 0 1 0 0 0 16 1 1812.0145 A0A0C4DG07;O60934 A0A0C4DG07 344 359 NBN Nibrin yes no 2;3 8.9759E-05 102.84 By MS/MS By MS/MS 2 2 115980000 61285000 54692000 2564 273 2834 6400;6401;6402;6403 5906;5907;5908;5909 5909 490;6298;7220 4 IPQDGDYEFLK LKNSSDWKIPQDGDYE DGDYEFLKSWTVEDLQ K I P L K S 0 0 0 2 0 1 1 1 0 1 1 1 0 1 1 0 0 0 1 0 0 0 11 0 1323.6347 F5H5B4;Q13043 F5H5B4 372 382 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes no 2 0.021939 55.084 By MS/MS By MS/MS 1 1 5153500 2673300 2480200 2565 888 2835 6404;6405 5910;5911 5910 7402 2 IPSEMPSPNFGK DTSLIHGKIPSEMPSP MPSPNFGKNIYRKQSG K I P G K N 0 0 1 0 0 0 1 1 0 1 0 1 1 1 3 2 0 0 0 0 0 0 12 0 1302.6278 Q9H2J7 Q9H2J7 681 692 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 1.0341E-27 180.3 By MS/MS By MS/MS 1 1 34153000 16719000 17434000 2566 2645 2836 6406;6407 5912;5913;5914 5914 5387 3 IPSFFPSPEEPPSPSAPSIAK HPHTKLMRIPSFFPSP PSAPSIAKSGSLDSEL R I P A K S 2 0 0 0 0 0 2 0 0 2 0 1 0 2 7 5 0 0 0 0 0 0 21 0 2181.0994 Q12802;A0A087WTD7;A8MYJ1 Q12802 2697 2717 AKAP13 A-kinase anchor protein 13 yes no 2;3 0.0014499 61.942 By MS/MS By MS/MS 1 2 32190000 11204000 20986000 2567 1877 2837 6408;6409;6410 5915;5916;5917 5916 3560 3 IPSIVSSPLNSPLDR SPLADAKRIPSIVSSP PLNSPLDRSGIDITDF R I P D R S 0 1 1 1 0 0 0 0 0 2 2 0 0 0 3 4 0 0 0 1 0 0 15 0 1593.8726 P49790 P49790 328 342 NUP153 Nuclear pore complex protein Nup153 yes yes 2 1.2457E-44 176.25 By MS/MS By MS/MS 3 3 62426000 35421000 27005000 2568 1729 2838;2839 6411;6412;6413;6414;6415;6416 5918;5919;5920;5921;5922 5922 3249;3250;3251 5 IPSPNILK SPNPRSVRIPSPNILK IPSPNILKTGLTENVD R I P L K T 0 0 1 0 0 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 0 0 8 0 880.5382 Q5VUA4 Q5VUA4 2099 2106 ZNF318 Zinc finger protein 318 yes yes 2 0.012375 83.883 By MS/MS By MS/MS 1 1 9722000 6512700 3209300 2569 2116 2840 6417;6418 5923;5924;5925;5926 5926 4195 4 IPSTPKLIPK DSRNKLSKIPSTPKLI STPKLIPKVTKTADKH K I P P K V 0 0 0 0 0 0 0 0 0 2 1 2 0 0 3 1 1 0 0 0 0 0 10 1 1092.6907 B5MBZ0;Q9HC35 B5MBZ0 198 207 EML4 Echinoderm microtubule-associated protein-like 4 yes no 2 0.0022719 97.163 By MS/MS By matching 1 1 5015500 3029300 1986200 2570 501 2841 6419;6420 5927 5927 942;6355 1 IPVEGPLSPSR GNNPIFPRIPVEGPLS EGPLSPSRGDFPKGIP R I P S R G 0 1 0 0 0 0 1 1 0 1 1 0 0 0 3 2 0 0 0 1 0 0 11 0 1150.6346 O00512 O00512 680 690 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 4.5452E-05 118.76 By MS/MS By MS/MS 1 1 9976300 6510700 3465600 2571 1335 2842 6421;6422 5928;5929 5928 2405 2 IPVEGPLSPSRGDFPK GNNPIFPRIPVEGPLS PSRGDFPKGIPPQMGP R I P P K G 0 1 0 1 0 0 1 2 0 1 1 1 0 1 4 2 0 0 0 1 0 0 16 1 1694.8992 O00512 O00512 680 695 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2;3 0.0057112 65.652 By matching By MS/MS 2 2 42981000 21884000 21097000 2572 1335 2843 6423;6424;6425;6426 5930;5931 5931 2405 2 IPYPGRSPQDLASTSR SDSARGIRIPYPGRSP QDLASTSRAREGLRNM R I P S R A 1 2 0 1 0 1 0 1 0 1 1 0 0 0 3 3 1 0 1 0 0 0 16 1 1743.8904 Q9HC52;C9JM54;C9J6K3 Q9HC52 104 119 CBX8 Chromobox protein homolog 8 yes no 3 0.0090143 54.276 By matching By MS/MS 1 1 5165900 3609100 1556800 2573 2691 2844 6427;6428 5932 5932 5488 1 IQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPK GPQPPPVRIQDIKTEN GSAAAVPKIESPDSSS R I Q P K I 6 0 1 1 1 2 1 3 0 2 2 2 0 0 6 4 2 0 0 1 0 0 34 1 3329.6926 Q12948 Q12948 223 256 FOXC1 Forkhead box protein C1 yes yes 3 0.00083923 51.125 By MS/MS By matching 1 1 29333000 17083000 12250000 2574 1887 2845 6429;6430 5933 5933 3599;3600 1 IQDPTEDAEAEDTPR KKRNHTKRIQDPTEDA AEAEDTPRKRLRTDKH R I Q P R K 2 1 0 3 0 1 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 0 15 0 1685.738 O96028;H0Y9L4 O96028 532 546 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2 0.011519 70.335 By MS/MS By matching 1 1 16282000 8284400 7997800 2575 1508 2846 6431;6432 5934 5934 1 IQELEDLLAK ESRACLERIQELEDLL ELEDLLAKEKDNSRRM R I Q A K E 1 0 0 1 0 1 2 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1170.6496 P20700;E9PBF6 P20700 321 330 LMNB1 Lamin-B1 yes no 2 0.0085765 78.334 By MS/MS 1 629890 0 629890 2576 1612 2847 6433 5935 5935 1 IQELGDLYTPAPGR IRSEQRPRIQELGDLY LYTPAPGRAESGPEKP R I Q G R A 1 1 0 1 0 1 1 2 0 1 2 0 0 0 2 0 1 0 1 0 0 0 14 0 1528.7886 M0R2P8;M0R3A4;M0QYA2;Q9NWS0 M0R2P8 68 81 PIH1D1 PIH1 domain-containing protein 1 yes no 2 0.00046515 101.95 By MS/MS By MS/MS 1 1 5317700 2400900 2916800 2577 1301 2848 6434;6435 5936;5937 5936 6580;7490 2 IQEQESSGEEDSDLSPEER EGLEPKYRIQEQESSG SDLSPEEREKKRQFEM R I Q E R E 0 1 0 2 0 2 6 1 0 1 1 0 0 0 1 4 0 0 0 0 0 0 19 0 2162.9087 E7EMN6;G1AUC5;Q6NXS1;P41236 E7EMN6 90 108 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 yes no 2 0.001968 69.261 By MS/MS 1 4946700 4946700 0 2578 706 2849 6436 5938 5938 1250;1251 1 IQIVTAVDASGSPK TDQQTGQKIQIVTAVD VDASGSPKQQFILTSP K I Q P K Q 2 0 0 1 0 1 0 1 0 2 0 1 0 0 1 2 1 0 0 2 0 0 14 0 1384.7562 P49116;C9JKS0;C9JMI6 P49116 35 48 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.00081018 95.662 By MS/MS By MS/MS 1 1 6065200 3662100 2403100 2579 1722 2850 6437;6438 5939;5940 5939 3226;6716 2 IQPLEPDSPTGLSENPTPATEK PPPPPLPKIQPLEPDS NPTPATEKLFVPQESD K I Q E K L 1 0 1 1 0 1 3 1 0 1 2 1 0 0 5 2 3 0 0 0 0 0 22 0 2320.1434 Q9ULJ3 Q9ULJ3 996 1017 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 3 2.7029E-19 120.9 By MS/MS By MS/MS 1 1 60865000 32842000 28023000 2580 2847 2851 6439;6440 5941;5942 5941 5857;5858 2 IQPQPPDEDGDHSDKEDEQPQVVVLK GPTVETKRIQPQPPDE QPQVVVLKKGDLSVEE R I Q L K K 0 0 0 5 0 4 3 1 1 1 1 2 0 0 4 1 0 0 0 3 0 0 26 1 2941.3941 Q96AT1 Q96AT1 38 63 KIAA1143 Uncharacterized protein KIAA1143 yes yes 3 0.014328 43.523 By matching By MS/MS 1 1 139400000 67302000 72099000 2581 2458 2852 6441;6442 5943 5943 4947 1 IQQALTSPLPMTPILEGSHR PPLPLHIRIQQALTSP PILEGSHRAHSLLFEN R I Q H R A 1 1 0 0 0 2 1 1 1 2 3 0 1 0 3 2 2 0 0 0 0 0 20 0 2188.1674 Q8IZ21 Q8IZ21 421 440 PHACTR4 Phosphatase and actin regulator 4 yes yes 3 3.7861E-05 80.142 By MS/MS By matching 2 2 18096000 11152000 6943700 2582 2291 2853;2854 6443;6444;6445;6446 5944;5945 5945 307 4596;6951 2 IQQFDDGGSDEEDIWEEK FEACCKERIQQFDDGG EEDIWEEKHIAFTPES R I Q E K H 0 0 0 4 0 2 4 2 0 2 0 1 0 1 0 1 0 1 0 0 0 0 18 0 2138.8916 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 316 333 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 2;3 2.0235E-48 173.36 By MS/MS By MS/MS 2 2 647600000 335560000 312040000 2583 814 2855 6447;6448;6449;6450 5946;5947;5948;5949 5949 1458 4 IQQFDDGGSDEEDIWEEKHIAFTPESQR FEACCKERIQQFDDGG AFTPESQRRSSSGSTD R I Q Q R R 1 1 0 4 0 3 5 2 1 3 0 1 0 2 1 2 1 1 0 0 0 0 28 1 3305.4749 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 316 343 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 4 6.6904E-06 71.857 By MS/MS By MS/MS 1 1 32267000 18666000 13602000 2584 814 2856 6451;6452 5950;5951 5950 1458 2 IQQMLPDKTIASLVKYYYSWK FHGKSFHRIQQMLPDK VKYYYSWKKTRSRTSL R I Q W K K 1 0 0 1 0 2 0 0 0 2 2 3 1 0 1 2 1 1 3 1 0 0 21 2 2574.3556 Q9P2K3;E9PQE5;B4DV59 Q9P2K3 111 131 RCOR3 REST corepressor 3 yes no 3 0.028966 41.257 By MS/MS By matching 1 1 10613000 6710000 3903100 2585 2794 2857 6453;6454 5952 5952 1 IQQQFSDLK KYRMERPKIQQQFSDL QQQFSDLKRKLAEVTE K I Q L K R 0 0 0 1 0 3 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 9 0 1105.5768 O94906 O94906 138 146 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.0043868 105.4 By MS/MS By MS/MS 2 2 19631000 9729500 9901400 2586 1468 2858 6455;6456;6457;6458 5953;5954 5954 2724 2 IQQQFSDLKR KYRMERPKIQQQFSDL QQFSDLKRKLAEVTEE K I Q K R K 0 1 0 1 0 3 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 1 1261.6779 O94906 O94906 138 147 PRPF6 Pre-mRNA-processing factor 6 yes yes 2;3 7.47E-05 120.86 By MS/MS By MS/MS 2 2 45221000 25376000 19844000 2587 1468 2859 6459;6460;6461;6462 5955;5956;5957;5958 5958 2724 4 IQQSLSNPLSISLTDR VPHVSKERIQQSLSNP LSISLTDRKTELLSGE R I Q D R K 0 1 1 1 0 2 0 0 0 2 3 0 0 0 1 4 1 0 0 0 0 0 16 0 1770.9476 E9PPJ1;Q8NG31 E9PPJ1 547 562 CASC5 Protein CASC5 yes no 2 0.0036832 66.498 By MS/MS By MS/MS 1 1 2733000 1321200 1411800 2588 835 2860 6463;6464 5959;5960 5960 1510;1511 2 IQSSPGALSEDKCSPK SGNSSPKRIQSSPGAL SEDKCSPKKVKLGFQQ R I Q P K K 1 0 0 1 1 1 1 1 0 1 1 2 0 0 2 4 0 0 0 0 0 0 16 1 1702.8196 Q5T7B8 Q5T7B8 571 586 KIF24 Kinesin-like protein KIF24 yes yes 2 0.020358 55.98 By MS/MS By MS/MS 1 1 6605900 3777300 2828600 2589 2101 2861 6465;6466 5961;5962 5962 4157 2 IQTTLSNLVVK AAVAPKKKIQTTLSNL TLSNLVVKGTNLIIQE K I Q V K G 0 0 1 0 0 1 0 0 0 1 2 1 0 0 0 1 2 0 0 2 0 0 11 0 1214.7234 Q5T670;Q7L590 Q5T670 482 492 MCM10 Protein MCM10 homolog yes no 2 0.022368 61.235 By MS/MS By MS/MS 1 1 1832900 1096500 736410 2590 2100 2862 6467;6468 5963;5964 5964 2 IQVEQTRDEDLDTDSLD INPVTEKRIQVEQTRD DLDTDSLD________ R I Q L D - 0 1 0 5 0 2 2 0 0 1 2 0 0 0 0 1 2 0 0 1 0 0 17 1 1990.8967 V9GYT7 V9GYT7 49 65 PSIP1 yes yes 2;3 1.5192E-10 122.5 By MS/MS By MS/MS 2 2 297760000 177520000 120240000 2591 3014 2863 6469;6470;6471;6472 5965;5966;5967;5968 5965 6210 4 IREEYPDR MGTLLISKIREEYPDR IREEYPDRIMNTFSVV K I R D R I 0 2 0 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 8 1 1076.5251 Q5JP53;P07437;Q5ST81;A0A075B736;Q5SQY0;CON__ENSEMBL:ENSBTAP00000025008;A6NNZ2;Q9H4B7;P68371;Q3ZCM7;Q9BVA1;Q13885 Q5JP53 137 144 TUBB;TUBB8;TUBB1;TUBB4B;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-2B chain;Tubulin beta-2A chain no no 3 0.023942 96.668 By matching By MS/MS 1 1 3141200 1340900 1800300 2592 1537;1935;1811 2864 6473;6474 5969 5969 1 IRSSPREAK DSGPPTKKIRSSPREA RSSPREAKNKRRSGKN K I R A K N 1 2 0 0 0 0 1 0 0 1 0 1 0 0 1 2 0 0 0 0 0 0 9 2 1042.5883 Q9H1E3 Q9H1E3 37 45 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.012998 66.299 By MS/MS By matching 1 1 37619000 37062000 557060 2593 2637 2865 6475;6476 5970 5970 5374 1 IRSTRSVENLPECGITHEQR PARIPENRIRSTRSVE CGITHEQRAGSFSTVP R I R Q R A 0 3 1 0 1 1 3 1 1 2 1 0 0 0 1 2 2 0 0 1 0 0 20 2 2381.187 A0A0B4J1S8;Q9UBF8;F8W860 A0A0B4J1S8 435 454 PI4KB Phosphatidylinositol 4-kinase beta yes no 4 1.879E-05 76.713 By MS/MS By MS/MS 1 1 8080800 3410700 4670100 2594 257 2866 6477;6478 5971;5972 5972 465;466;6295 2 IRTPSGEFLER AEPVSKLRIRTPSGEF PSGEFLERRFLASNKL R I R E R R 0 2 0 0 0 0 2 1 0 1 1 0 0 1 1 1 1 0 0 0 0 0 11 1 1303.6884 B3KT28;B1ANM7;Q9UNN5 B3KT28 384 394 FAF1 FAS-associated factor 1 yes no 2 0.012889 70.089 By matching By MS/MS 1 1 6578500 2922300 3656200 2595 467 2867 6479;6480 5973 5973 894 1 IRTSPTFR VHSHKKKKIRTSPTFR IRTSPTFRRPKTLRLR K I R F R R 0 2 0 0 0 0 0 0 0 1 0 0 0 1 1 1 2 0 0 0 0 0 8 1 976.54541 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 42 49 RPL23A 60S ribosomal protein L23a yes no 3 0.005865 83.883 By MS/MS By MS/MS 1 1 9041200 4419100 4622100 2596 433 2868 6481;6482 5974;5975 5975 823 2 ISAPELLLHSPAR NPQDTPVKISAPELLL LLLHSPARSAMCLTGS K I S A R S 2 1 0 0 0 0 1 0 1 1 3 0 0 0 2 2 0 0 0 0 0 0 13 0 1402.7932 Q5VUA4 Q5VUA4 1887 1899 ZNF318 Zinc finger protein 318 yes yes 2;3 0.0010962 111.43 By MS/MS By MS/MS 2 2 4116600 2600200 1516400 2597 2116 2869 6483;6484;6485;6486 5976;5977;5978 5976 4196 3 ISAPNVDFNLEGPK DVNLKGPRISAPNVDF DFNLEGPKVKGSLGAT R I S P K V 1 0 2 1 0 0 1 1 0 1 1 1 0 1 2 1 0 0 0 1 0 0 14 0 1499.762 Q09666 Q09666 5447 5460 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.013415 60.196 By MS/MS By MS/MS 1 1 4775600 2960900 1814700 2598 1871 2870 6487;6488 5979;5980 5980 3535 2 ISAWHNNVEKTLPSTK CVEWFNTKISAWHNNV EKTLPSTKATRVGVLL K I S T K A 1 0 2 0 0 0 1 0 1 1 1 2 0 0 1 2 2 1 0 1 0 0 16 1 1823.953 Q14258 Q14258 558 573 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.005838 64.224 By MS/MS 1 19661000 19661000 0 2599 1946 2871 6489 5981 5981 3755;3756;6815 0 ISDYFEFAGGSAPGTSPGR KGTPRGHKISDYFEFA APGTSPGRSVPPVARS K I S G R S 2 1 0 1 0 0 1 4 0 1 0 0 0 2 2 3 1 0 1 0 0 0 19 0 1914.8748 Q86UE8 Q86UE8 84 102 TLK2 Serine/threonine-protein kinase tousled-like 2 yes yes 2;3 6.8997E-05 81.854 By MS/MS By matching 2 2 26709000 13370000 13339000 2600 2235 2872 6490;6491;6492;6493 5982;5983 5982 4476 2 ISDYFEYQGGNGSSPVR SIGGRGHKISDYFEYQ GNGSSPVRGIPPAIRS K I S V R G 0 1 1 1 0 1 1 3 0 1 0 0 0 1 1 3 0 0 2 1 0 0 17 0 1874.8435 C9JWT6;B3KRP1;Q9UKI8 C9JWT6 71 87 TLK1 Serine/threonine-protein kinase tousled-like 1 yes no 2 0.0009202 83.792 By MS/MS By MS/MS 2 2 26759000 15858000 10900000 2601 475 2873;2874 6494;6495;6496;6497 5984;5985;5986 5986 904;905 3 ISEEDELDTKLTRIPSAK DYRTRVLKISEEDELD LTRIPSAKKYKDIIRQ K I S A K K 1 1 0 2 0 0 3 0 0 2 2 2 0 0 1 2 2 0 0 0 0 0 18 2 2044.0688 B1AKZ5;Q15121 B1AKZ5 67 84 PEA15 Astrocytic phosphoprotein PEA-15 yes no 3 0.026473 46.982 By MS/MS By matching 2 1 19511000 15271000 4239800 2602 459 2875 6498;6499;6500 5987 5987 1 ISEGLPTPTK SPLKSPYKISEGLPTP EGLPTPTKMTPRSRIL K I S T K M 0 0 0 0 0 0 1 1 0 1 1 1 0 0 2 1 2 0 0 0 0 0 10 0 1041.5706 P06400 P06400 815 824 RB1 Retinoblastoma-associated protein yes yes 2 0.0081977 93.766 By MS/MS By MS/MS 1 1 6624500 3330900 3293600 2603 1530 2876 6501;6502 5988;5989 5988 6655 2 ISEGLPTPTKMTPR SPLKSPYKISEGLPTP TPTKMTPRSRILVSIG K I S P R S 0 1 0 0 0 0 1 1 0 1 1 1 1 0 3 1 3 0 0 0 0 0 14 1 1526.8127 P06400 P06400 815 828 RB1 Retinoblastoma-associated protein yes yes 3 0.010139 79.013 By MS/MS By matching 1 1 10069000 5693500 4375800 2604 1530 2877 6503;6504 5990 5990 6655;6656 1 ISESPEPGQR ________________ ESPEPGQRTFTTLSSV R I S Q R T 0 1 0 0 0 1 2 1 0 1 0 0 0 0 2 2 0 0 0 0 0 0 10 0 1098.5306 H7C4B6;O14867 H7C4B6 8 17 BACH1 Transcription regulator protein BACH1 yes no 2 0.018722 64.64 By MS/MS 1 1824500 0 1824500 2605 1187 2878 6505 5991 5991 2151 1 ISFVEEDVHPK PQRLKETRISFVEEDV VEEDVHPKWIPGAADD R I S P K W 0 0 0 1 0 0 2 0 1 1 0 1 0 1 1 1 0 0 0 2 0 0 11 0 1298.6507 Q8WYP5 Q8WYP5 1231 1241 AHCTF1 Protein ELYS yes yes 2 0.0089359 71.176 By MS/MS By matching 1 1 5072100 2370200 2701900 2606 2417 2879 6506;6507 5992 5992 4850 1 ISGLDYVDSALLMGR ISRGEFVRISGLDYVD DSALLMGRDRDKPFKR R I S G R D 1 1 0 2 0 0 0 2 0 1 3 0 1 0 0 2 0 0 1 1 0 0 15 0 1608.8181 Q9P2F8 Q9P2F8 258 272 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 2 6.0998E-07 119.45 By MS/MS 1 2452300 2452300 0 2607 2790 2880 6508 5993 5993 7924 1 ISGLIYEETR ARRGGVKRISGLIYEE GLIYEETRGVLKVFLE R I S T R G 0 1 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1179.6136 P62805 P62805 47 56 HIST1H4A Histone H4 yes yes 2 5.6527E-05 121.73 By MS/MS By MS/MS 1 1 57749000 30394000 27355000 2608 1801 2881 6509;6510 5994;5995 5994 2 ISHSLYSGIEGLDESPSRNAALSR ALDDRERRISHSLYSG SRNAALSRIMGKYQLS R I S S R I 2 2 1 1 0 0 2 2 1 2 3 0 0 0 1 6 0 0 1 0 0 0 24 1 2558.2725 Q5VWV2;Q8TEW0;Q5VWU8;F5GZI3;B1AP52 Q5VWV2 657 680 PARD3 Partitioning defective 3 homolog yes no 3 0.0015412 55.453 By MS/MS By MS/MS 2 2 15408000 7862700 7545400 2609 2121 2882;2883 6511;6512;6513;6514 5996;5997;5998 5996 4208;4209;4210;7752 2 ISICSSDKR DEDDPDKRISICSSDK SICSSDKRIACEEEFS R I S K R I 0 1 0 1 1 0 0 0 0 2 0 1 0 0 0 3 0 0 0 0 0 0 9 1 1064.5284 Q13547 Q13547 405 413 HDAC1 Histone deacetylase 1 yes yes 2 0.012022 84.507 By MS/MS By MS/MS 1 1 6330700 2816800 3513900 2610 1925 2884 6515;6516 5999;6000 6000 3714;3715 2 ISKLEVTEIVKPSPK DFESSSMKISKLEVTE EIVKPSPKRKMEPDTE K I S P K R 0 0 0 0 0 0 2 0 0 2 1 3 0 0 2 2 1 0 0 2 0 0 15 2 1666.9869 Q7Z6E9 Q7Z6E9 1167 1181 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 3 2.7715E-06 116.73 By MS/MS By MS/MS 1 1 20194000 10000000 10194000 2611 2224 2885 6517;6518 6001;6002 6001 4451 2 ISKQQLQTVK DMARRQQKISKQQLQT KQQLQTVKDRFQAFLN K I S V K D 0 0 0 0 0 3 0 0 0 1 1 2 0 0 0 1 1 0 0 1 0 0 10 1 1171.6925 F1T0E5;Q9ULU8 F1T0E5 148 157 CADPS Calcium-dependent secretion activator 1 yes no 2 0.0036066 71.379 By matching By MS/MS 1 1 4214600 2449100 1765500 2612 845 2886 6519;6520 6003 6003 1 ISLPLPNFSSLNLR LLEGEESRISLPLPNF NFSSLNLRETNLDSLP R I S L R E 0 1 2 0 0 0 0 0 0 1 4 0 0 1 2 3 0 0 0 0 0 0 14 0 1569.8879 P08670;B0YJC4 P08670 411 424 VIM Vimentin yes no 2 0.020301 56.793 By MS/MS 1 1533200 1533200 0 2613 1546 2887 6521 6004 6004 2843 1 ISLSKSPTK KLAKPMEKISLSKSPT SLSKSPTKTDPKNEEE K I S T K T 0 0 0 0 0 0 0 0 0 1 1 2 0 0 1 3 1 0 0 0 0 0 9 1 959.56515 A0A0A0MRN4;Q5BKZ1 A0A0A0MRN4 176 184 ZNF326 DBIRD complex subunit ZNF326 yes no 2 0.014917 72.731 By matching By MS/MS 1 1 35370000 14347000 21023000 2614 193 2888 6522;6523 6005 6005 347 1 ISLSKSPTKTDPK KLAKPMEKISLSKSPT SPTKTDPKNEEEEKRR K I S P K N 0 0 0 1 0 0 0 0 0 1 1 3 0 0 2 3 2 0 0 0 0 0 13 2 1400.7875 A0A0A0MRN4;Q5BKZ1 A0A0A0MRN4 176 188 ZNF326 DBIRD complex subunit ZNF326 yes no 2 6.1476E-10 143.56 By MS/MS By MS/MS 1 1 29596000 10520000 19076000 2615 193 2889 6524;6525 6006;6007 6007 347 2 ISLSPFSTTDSAYEWK GSGAFVKKISLSPFST TDSAYEWKMPKKSSLG K I S W K M 1 0 0 1 0 0 1 0 0 1 1 1 0 1 1 4 2 1 1 0 0 0 16 0 1830.8676 Q9UPY3;H0YJZ6 Q9UPY3 1467 1482 DICER1 Endoribonuclease Dicer yes no 2 8.4947E-05 107.85 By MS/MS By MS/MS 2 2 15931000 7049600 8881000 2616 2873 2890 6526;6527;6528;6529 6008;6009;6010 6008 5936;5937 3 ISMPDLDLHLKSPK DMHFKAPKISMPDLDL DLHLKSPKAKGEVDVD K I S P K A 0 0 0 2 0 0 0 0 1 1 3 2 1 0 2 2 0 0 0 0 0 0 14 1 1592.8596 Q09666 Q09666 2386 2399 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 3 0.005332 73.252 By MS/MS 1 0 0 0 2617 1871 2891 6530 6011 6011 3536 1 ISMQDVDLSLGSPK EMIIQKPKISMQDVDL DLSLGSPKLKGDIKVS K I S P K L 0 0 0 2 0 1 0 1 0 1 2 1 1 0 1 3 0 0 0 1 0 0 14 0 1488.7494 Q09666 Q09666 500 513 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0036079 73.022 By MS/MS By MS/MS 1 1 11710000 6704100 5006400 2618 1871 2892 6531;6532 6012;6013 6013 3537;3538 2 ISMSEVDLNVAAPK SGKTGTCRISMSEVDL DLNVAAPKVKGGVDVT R I S P K V 2 0 1 1 0 0 1 0 0 1 1 1 1 0 1 2 0 0 0 2 0 0 14 0 1472.7545 Q09666 Q09666 569 582 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0036874 72.615 By MS/MS By MS/MS 1 1 2086700 1271200 815550 2619 1871 2893 6533;6534 6014;6015 6014 3539;3540 2 ISPMPFHPSQVSPR PLKIPVSRISPMPFHP HPSQVSPRARFPVSIT R I S P R A 0 1 0 0 0 1 0 0 1 1 0 0 1 1 4 3 0 0 0 1 0 0 14 0 1578.7977 E7EWD6;Q76L83 E7EWD6 598 611 ASXL2 Putative Polycomb group protein ASXL2 yes no 2;3 0.0017511 72.184 By MS/MS By MS/MS 2 2 14235000 8279300 5955900 2620 747 2894 6535;6536;6537;6538 6016;6017;6018;6019;6020 6020 1356;1357;1358 5 ISQDADLKTPTKPK IQSLLLSKISQDADLK LKTPTKPKQHDQVSKI K I S P K Q 1 0 0 2 0 1 0 0 0 1 1 3 0 0 2 1 2 0 0 0 0 0 14 2 1540.8461 Q9P0K7 Q9P0K7 241 254 RAI14 Ankycorbin yes yes 3 0.02176 67.902 By matching By MS/MS 1 1 12703000 5818500 6884300 2621 2773 2895 6539;6540 6021 6021 1 ISRQDPVTYISETDEEDDFMCK PVSSKPGKISRQDPVT EEDDFMCKKAASKSKE K I S C K K 0 1 0 4 1 1 3 0 0 2 0 1 1 1 1 2 2 0 1 1 0 0 22 1 2677.1524 P35251;D6RAD2 P35251 98 119 RFC1 Replication factor C subunit 1 yes no 3 0.00079921 63.225 By MS/MS By MS/MS 2 2 26828000 14354000 12475000 2622 1669 2896;2897 6541;6542;6543;6544 6022;6023;6024 6024 206 3072;6697 3 ISSKSPGHMVILDQTK KKSEEKKRISSKSPGH MVILDQTKGDHCRPSR R I S T K G 0 0 0 1 0 1 0 1 1 2 1 2 1 0 1 3 1 0 0 1 0 0 16 1 1739.924 Q9NWH9 Q9NWH9 549 564 SLTM SAFB-like transcription modulator yes yes 3 8.3461E-05 101.38 By MS/MS By MS/MS 2 2 56847000 24994000 31853000 2623 2744 2898;2899 6545;6546;6547;6548 6025;6026;6027 6025 5618;5619;5620 3 ISSLGSQAMQMER NDKEVSDRISSLGSQA SQAMQMERKKSQHGAG R I S E R K 1 1 0 0 0 2 1 1 0 1 1 0 2 0 0 3 0 0 0 0 0 0 13 0 1436.6752 P11274;A9UF01 P11274 200 212 BCR;BCR/ABL fusion Breakpoint cluster region protein yes no 2 0.0037694 77.372 By MS/MS By MS/MS 1 1 6687900 3832300 2855600 2624 1562 2900 6549;6550 6028;6029 6028 2866 2 ISSPMHPSAGGQR GFAPMSPRISSPMHPS HPSAGGQRGGFGSPGG R I S Q R G 1 1 0 0 0 1 0 2 1 1 0 0 1 0 2 3 0 0 0 0 0 0 13 0 1323.6354 O00267 O00267 669 681 SUPT5H Transcription elongation factor SPT5 yes yes 2 0.0048207 73.666 By MS/MS By MS/MS 1 1 16235000 7897200 8337400 2625 1328 2901 6551;6552 6030;6031 6030 2396 2 ISSSVKK DGEIKWLRISSSVKKY RISSSVKKYYIHDHFI R I S K K Y 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 3 0 0 0 1 0 0 7 1 747.44905 P48357 P48357 788 794 LEPR Leptin receptor yes yes 2 0.017224 54.722 By MS/MS 1 0 0 0 2626 1717 2902 6553 6032 6032 3201;3202 1 ISSTPTTETIR KSTRRSGRISSTPTTE TPTTETIRGIDSDDVQ R I S I R G 0 1 0 0 0 0 1 0 0 2 0 0 0 0 1 2 4 0 0 0 0 0 11 0 1204.6299 A0A075B754;Q96QE3 A0A075B754 600 610 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 4.7852E-06 130.44 By MS/MS By MS/MS 2 2 34522000 19585000 14937000 2627 12 2903 6554;6555;6556;6557 6033;6034;6035 6035 26 3 ISSTSSLVK TVSQRRKRISSTSSLV SSTSSLVKSSVSVPSE R I S V K S 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 4 1 0 0 1 0 0 9 0 920.51786 A0A0G2JNU3;A6H8Y1;A0A0G2JN16;A0A0A0MRX7 A0A0G2JNU3 98 106 BDP1 Transcription factor TFIIIB component B homolog yes no 2 0.0084696 76.282 By MS/MS By MS/MS 1 1 9205200 5321800 3883300 2628 328 2904 6558;6559 6036;6037 6036 612 2 ISSVPNSLSK SGDVQTMKISSVPNSL SVPNSLSKRNVSLTRS K I S S K R 0 0 1 0 0 0 0 0 0 1 1 1 0 0 1 4 0 0 0 1 0 0 10 0 1030.5659 X6R5W5;X6RAE7;R4GNB2;R4GN35;Q5VZ89 X6R5W5 408 417 DENND4C DENN domain-containing protein 4C yes no 2 0.012547 68.536 By MS/MS By MS/MS 1 1 3568400 1871200 1697200 2629 2123 2905 6560;6561 6038;6039 6038 4216 2 ISSYPEDNFPDEEK PPLPPKPRISSYPEDN DNFPDEEKASTIKHCP R I S E K A 0 0 1 2 0 0 3 0 0 1 0 1 0 1 2 2 0 0 1 0 0 0 14 0 1668.7155 A0A0A0MQR1;Q9Y4K4 A0A0A0MQR1 398 411 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 5 yes no 2 0.006195 66.285 By matching By MS/MS 1 1 6358400 3401300 2957100 2630 159 2906 6562;6563 6040 6040 287;288 1 ISTASQVSQGTGSPVPK STGSPTNKISTASQVS GTGSPVPKIHGSSFVT K I S P K I 1 0 0 0 0 2 0 2 0 1 0 1 0 0 2 4 2 0 0 2 0 0 17 0 1642.8526 Q9ULM3 Q9ULM3 524 540 YEATS2 YEATS domain-containing protein 2 yes yes 2 2.3786E-46 180.32 By MS/MS By MS/MS 1 1 28846000 14008000 14838000 2631 2853 2907 6564;6565 6041;6042;6043 6041 5871 3 ISTPQTNTVPIKPLISTPPVSSQPK PRSYVSPRISTPQTNT PPVSSQPKVSTPVVKQ R I S P K V 0 0 1 0 0 2 0 0 0 3 1 2 0 0 6 4 4 0 0 2 0 0 25 1 2629.4691 A0A0A0MRT2;Q9BTA9 A0A0A0MRT2 303 327 WAC WW domain-containing adapter protein with coiled-coil yes no 3 0.01399 44.5 By MS/MS By MS/MS 2 3 28302000 15188000 13114000 2632 200 2908;2909 6566;6567;6568;6569;6570 6044;6045;6046 6044 364 3 ISTVAVQSVNAGAPLITSTSPTTATSPK VMTSLGQKISTVAVQS PTTATSPKVVIQTIPT K I S P K V 4 0 1 0 0 1 0 1 0 2 1 1 0 0 3 5 6 0 0 3 0 0 28 0 2698.4389 Q15723 Q15723 405 432 ELF2 ETS-related transcription factor Elf-2 yes yes 3 0.0012212 54.66 By matching By MS/MS 1 1 18691000 10846000 7845700 2633 2005 2910 6571;6572 6047 6047 3910;6836 1 ISTYGLPAGGIQPHPQTK NVASLVQRISTYGLPA IQPHPQTKNIKKKTKK R I S T K N 1 0 0 0 0 2 0 3 1 2 1 1 0 0 3 1 2 0 1 0 0 0 18 0 1863.9843 Q9Y5K6 Q9Y5K6 85 102 CD2AP CD2-associated protein yes yes 2 0.018363 51.463 By MS/MS By MS/MS 1 1 4099200 2597600 1501600 2634 2931 2911 6573;6574 6048;6049 6049 6091 2 ISVYYNEATGGK DSDLQLDRISVYYNEA YNEATGGKYVPRAILV R I S G K Y 1 0 1 0 0 0 1 2 0 1 0 1 0 0 0 1 1 0 2 1 0 0 12 0 1300.6299 Q5JP53;P07437 Q5JP53 29 40 TUBB Tubulin beta chain yes no 2 9.8913E-05 115.7 By MS/MS By matching 1 1 9618400 5021700 4596700 2635 1537 2912 6575;6576 6050 6050 1 ISYIPDEEVSSPSPPQR QFENYSFKISYIPDEE SSPSPPQRAQRGDHSS K I S Q R A 0 1 0 1 0 1 2 0 0 2 0 0 0 0 4 4 0 0 1 1 0 0 17 0 1899.9214 F8W930;Q9Y6M1 F8W930 158 174 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 yes no 2;3 0.00068745 75.877 By MS/MS By MS/MS 4 3 72096000 43201000 28895000 2636 941 2913;2914 6577;6578;6579;6580;6581;6582;6583 6051;6052;6053;6054;6055;6056;6057 6056 1705;1706;1707 7 ITARKDNILR ENYHDQKRITARKDNI ARKDNILRLWSYLQEL R I T L R L 1 2 1 1 0 0 0 0 0 2 1 1 0 0 0 0 1 0 0 0 0 0 10 2 1198.7146 P11277 P11277 499 508 SPTB Spectrin beta chain, erythrocytic yes yes 3 0.013408 58.433 By MS/MS 1 0 0 0 2637 1563 2915 6584 6058 6058 1 ITEGVPQLLIVLTADR LVSSAGSRITEGVPQL LIVLTADRSGDDVRNP R I T D R S 1 1 0 1 0 1 1 1 0 2 3 0 0 0 1 0 2 0 0 2 0 0 16 0 1737.0036 E7ENL6;P12111 E7ENL6 521 536 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0023877 75.89 By MS/MS By matching 1 1 3119700 1706300 1413400 2638 710 2916 6585;6586 6059 6059 1 ITFELVYEELLK VSVAPNAKITFELVYE LVYEELLKRRLGVYEL K I T L K R 0 0 0 0 0 0 3 0 0 1 3 1 0 1 0 0 1 0 1 1 0 0 12 0 1495.8174 H7C0L5;B7ZKJ8;Q14624 H7C0L5 10 21 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 0.0021343 99.568 By MS/MS By MS/MS 1 1 2408900 1220500 1188400 2639 524 2917 6587;6588 6060;6061 6060 2 ITGSPTLVK YQKRRSQKITGSPTLV TGSPTLVKNIPTSLGY K I T V K N 0 0 0 0 0 0 0 1 0 1 1 1 0 0 1 1 2 0 0 1 0 0 9 0 914.54368 A0A0U1RQE0;A8MUV4;A0A0U1RQR8;A0A0U1RQY3;A0A0U1RQM2;O15409;Q0PRL4 A0A0U1RQE0 568 576 FOXP2 Forkhead box protein P2 yes no 2 0.004999 85.963 By MS/MS By MS/MS 1 1 10223000 5470900 4752400 2640 335 2918 6589;6590 6062;6063 6062 626 2 ITIADCGQLE RNGKTSKKITIADCGQ IADCGQLE________ K I T L E - 1 0 0 1 1 1 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1118.5278 P62937 P62937 156 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 1 0.0013967 80.755 By matching By MS/MS 1 1 5416500 2359600 3056900 2641 1806 2919 6591;6592 6064 6064 1 ITISSLQDLTLYNPER VEQDTETKITISSLQD LTLYNPERTITVKGAI K I T E R T 0 1 1 1 0 1 1 0 0 2 3 0 0 0 1 2 2 0 1 0 0 0 16 0 1861.9785 Q9NZI8 Q9NZI8 310 325 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.00017465 95.018 By MS/MS 1 1700600 1700600 0 2642 2767 2920 6593 6065 6065 5679 1 ITITNDK KSTGKENKITITNDKG KITITNDKGRLSKEDI K I T D K G 0 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 2 0 0 0 0 0 7 0 803.43888 P17066;E9PM13;E9PS65;P11142;E9PKE3;E9PNE6;P54652;A8K7Q2;A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37;Q53FA3;P34931 P11142 501 507 HSPA6;HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 6;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like no no 2 2.4565E-07 119.56 By MS/MS By MS/MS 2 2 6037500 2529800 3507700 2643 1560;320;1590 2921 6594;6595;6596;6597 6066;6067;6068 6066 3 ITKPGSIDSNNQLFAPGGRLSWGK IDTSRLTKITKPGSID GGRLSWGKGSSGGSGA K I T G K G 1 1 2 1 0 1 0 4 0 2 2 2 0 1 2 3 1 1 0 0 0 0 24 2 2542.3292 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 909 932 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 0.00056819 63.316 By MS/MS By matching 1 1 63917000 38106000 25811000 2644 740 2922 6598;6599 6069 6069 1335 1 ITKTESLVIPSTR ERLPPSGRITKTESLV SLVIPSTRSEGKQAGR R I T T R S 0 1 0 0 0 0 1 0 0 2 1 1 0 0 1 2 3 0 0 1 0 0 13 1 1443.8297 F8VW41;Q86VP3 F8VW41 381 393 PACS2 Phosphofurin acidic cluster sorting protein 2 yes no 2 0.0093493 67.326 By matching By MS/MS 1 1 4792900 2837700 1955100 2645 921 2923 6600;6601 6070 6070 1655 1 ITLPVDFVTADKFDENAK KAEKNGVKITLPVDFV DKFDENAKTGQATVAS K I T A K T 2 0 1 3 0 0 1 0 0 1 1 2 0 2 1 0 2 0 0 2 0 0 18 1 2022.031 P00558 P00558 280 297 PGK1 Phosphoglycerate kinase 1 yes yes 3 0.0010143 77.051 By MS/MS 1 2783700 2783700 0 2646 1513 2924 6602 6071 6071 1 ITPLSLQTQGSSHETLNIVEEK PNEWEKRRITPLSLQT TLNIVEEKKRAEVGKD R I T E K K 0 0 1 0 0 2 3 1 1 2 3 1 0 0 1 3 3 0 0 1 0 0 22 0 2423.2544 O43491;E9PMV8;Q6R5J7 O43491 672 693 EPB41L2 Band 4.1-like protein 2 yes no 3 8.0476E-06 80.382 By MS/MS By MS/MS 1 1 16599000 8921700 7677800 2647 1387 2925 6603;6604 6072;6073 6072 2540;2541;6616 2 ITPPAAKPGSPQAK SMVQKSPRITPPAAKP KPGSPQAKSLQPAVAE R I T A K S 3 0 0 0 0 1 0 1 0 1 0 2 0 0 4 1 1 0 0 0 0 0 14 1 1361.7667 A0A0A0MSW3;P35658 A0A0A0MSW3 98 111 NUP214 Nuclear pore complex protein Nup214 yes no 2 2.9586E-05 118.52 By MS/MS By MS/MS 1 2 65701000 32545000 33156000 2648 226 2926 6605;6606;6607 6074;6075 6074 409 2 ITRKPVTVSPTTPTSPTEGEAS DVHAELDRITRKPVTV SPTEGEAS________ R I T A S - 1 1 0 0 0 0 2 1 0 1 0 1 0 0 4 3 6 0 0 2 0 0 22 2 2255.1645 Q9Y6G9;E9PHI6 Q9Y6G9 502 523 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2;3 7.1318E-05 81.003 By MS/MS By MS/MS 2 2 88237000 44307000 43930000 2649 2947 2927;2928 6608;6609;6610;6611 6076;6077 6077 6123;6124;7139;7140;7141 2 ITSFPESEGYSYETSTK YSYETTEKITSFPESE YSYETSTKTTRTPDTS K I T T K T 0 0 0 0 0 0 3 1 0 1 0 1 0 1 1 4 3 0 2 0 0 0 17 0 1924.8578 P46821 P46821 2014 2030 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0013044 73.466 By MS/MS By MS/MS 1 1 17295000 10307000 6988200 2650 1712 2929 6612;6613 6078;6079 6078 3176 2 ITSPLMEPSSIEK VCLAVEKRITSPLMEP MEPSSIEKIVEIDAHI R I T E K I 0 0 0 0 0 0 2 0 0 2 1 1 1 0 2 3 1 0 0 0 0 0 13 0 1430.7327 P28066 P28066 54 66 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.0020971 87.568 By MS/MS 1 3831000 3831000 0 2651 1639 2930 6614 6080 6080 3029 1 ITSPNIR KLEAIVQKITSPNIRR KITSPNIRRSASSNSA K I T I R R 0 1 1 0 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 7 0 799.4552 Q9UGU0 Q9UGU0 1359 1365 TCF20 Transcription factor 20 yes yes 2 0.026264 77.318 By matching By MS/MS 1 1 5103600 2626500 2477100 2652 2810 2931 6615;6616 6081 6081 1 ITSSTTGDKHFDKSPTK QSTAVDCKITSSTTGD HFDKSPTKTRHPRKID K I T T K T 0 0 0 2 0 0 0 1 1 1 0 3 0 1 1 3 4 0 0 0 0 0 17 2 1848.9218 H3BPM0;H3BS25;Q9BY12;H3BPB0 H3BPM0 73 89 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum yes no 4 0.0028896 57.045 By matching By MS/MS 1 1 5406300 2061100 3345100 2653 1125 2932 6617;6618 6082 6082 2053 1 ITVNGDSSAEAEELANEI PGYEEDMKITVNGDSS AEELANEI________ K I T E I - 3 0 2 1 0 0 4 1 0 2 1 0 0 0 0 2 1 0 0 1 0 0 18 0 1860.8589 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 848 865 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 2 3.5802E-56 179.66 By MS/MS By matching 1 1 50320000 26819000 23501000 2654 260 2933 6619;6620 6083 6083 475 1 ITVQASPNLDK LPSDFQHKITVQASPN QASPNLDKRRSLNSSS K I T D K R 1 0 1 1 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 11 0 1184.6401 Q5TCX8 Q5TCX8 523 533 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 yes yes 2 0.0015901 96.059 By MS/MS By MS/MS 1 1 8761600 4701200 4060400 2655 2110 2934 6621;6622 6084;6085 6084 4165 2 ITVQASPNLDKR LPSDFQHKITVQASPN ASPNLDKRRSLNSSSS K I T K R R 1 1 1 1 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 12 1 1340.7412 Q5TCX8 Q5TCX8 523 534 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 yes yes 3 0.0043144 63.754 By MS/MS 1 2560900 0 2560900 2656 2110 2935 6623 6086 6086 4165 1 ITVTAVCIR I T I R 1 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 2 0 0 2 0 0 9 0 1031.5798 REV__K7EQ11 yes no 2 0.00915 85.265 By MS/MS By matching 2 1 9100600 6577400 2523200 + 2657 2981 2936 6624;6625;6626 6087 6087 1 IVADKDYSVTANSK SLFLQTPKIVADKDYS YSVTANSKIVVVTAGV K I V S K I 2 0 1 2 0 0 0 0 0 1 0 2 0 0 0 2 1 0 1 2 0 0 14 1 1509.7675 P07195;A8MW50;F5H793;C9J7H8 P07195 78 91 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 3 0.004031 104.7 By MS/MS 1 5078800 0 5078800 2658 1535 2937 6627 6088 6088 1 IVAHAVEVPAVQSPR RKPIVLKRIVAHAVEV VPAVQSPRRSPRISFF R I V P R R 3 1 0 0 0 1 1 0 1 1 0 0 0 0 2 1 0 0 0 4 0 0 15 0 1571.8784 B5MBX0;Q96FF9;H0YCL8 B5MBX0 63 77 CDCA5 Sororin yes no 2;3 2.8144E-23 149.59 By MS/MS By MS/MS 2 3 76457000 40297000 36160000 2659 500 2938 6628;6629;6630;6631;6632 6089;6090;6091;6092;6093;6094;6095;6096 6091 938 8 IVELSEANKLAANSSLFTQR KIRSLEQRIVELSEAN NSSLFTQRNMKAQEEM R I V Q R N 3 1 2 0 0 1 2 0 0 1 3 1 0 1 0 3 1 0 0 1 0 0 20 1 2190.1644 H7BYJ3;O14578 H7BYJ3 409 428 CIT Citron Rho-interacting kinase yes no 3 0.030096 40.798 By MS/MS 1 0 0 0 2660 1153 2939 6633 6097 6097 1 IVEPEVVGESDSEVEGDAWR ERLARHRKIVEPEVVG EVEGDAWRMEREDSSE K I V W R M 1 1 0 2 0 0 5 2 0 1 0 0 0 0 1 2 0 1 0 4 0 0 20 0 2201.0124 P55081 P55081 107 126 MFAP1 Microfibrillar-associated protein 1 yes yes 2;3 8.1441E-35 145.71 By MS/MS By MS/MS 3 3 126780000 59699000 67083000 2661 1772 2940;2941 6634;6635;6636;6637;6638;6639 6098;6099;6100;6101;6102;6103 6100 3339;3340 6 IVEYSPPSAPR ALPEPKVRIVEYSPPS YSPPSAPRRPPVYYKF R I V P R R 1 1 0 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 1 0 0 11 0 1214.6295 O95696 O95696 124 134 BRD1 Bromodomain-containing protein 1 yes yes 2 1.8506E-06 147.24 By MS/MS By MS/MS 1 1 31954000 20054000 11900000 2662 1498 2942 6640;6641 6104;6105;6106 6106 2779 3 IVLLDSSLEYK RRYIKNPRIVLLDSSL LDSSLEYKKGESQTDI R I V Y K K 0 0 0 1 0 0 1 0 0 1 3 1 0 0 0 2 0 0 1 1 0 0 11 0 1278.7071 B4DUR8;P49368;Q5SZX6 B4DUR8 193 203 CCT3 T-complex protein 1 subunit gamma yes no 2 0.0046835 89.029 By MS/MS By MS/MS 2 1 1794700 954380 840310 2663 493 2943;2944 6642;6643;6644 6107;6108;6109 6108 929;930 3 IVLTSLPALAVPPPTPTK ALPTSHPKIVLTSLPA VPPPTPTKAAPPALVN K I V T K A 2 0 0 0 0 0 0 0 0 1 3 1 0 0 5 1 3 0 0 2 0 0 18 0 1814.0917 H0YCH1;O75398 H0YCH1 206 223 DEAF1 Deformed epidermal autoregulatory factor 1 homolog yes no 2 0.00044803 82.774 By MS/MS By MS/MS 1 1 10248000 6000900 4247400 2664 1060 2945 6645;6646 6110;6111 6110 6526;6527 2 IVNHWASPELR STFRQNPRIVNHWASP HWASPELRQNPGVKNE R I V L R Q 1 1 1 0 0 0 1 0 1 1 1 0 0 0 1 1 0 1 0 1 0 0 11 0 1320.6939 F1T0I1;J3KNL6;O15027 F1T0I1 308 318 SEC16A Protein transport protein Sec16A yes no 2 0.0040408 80.312 By MS/MS By MS/MS 1 1 9803800 6174400 3629400 2665 846 2946 6647;6648 6112;6113 6113 1524 2 IVPQSQVPNPESPGK QPIASSCKIVPQSQVP PNPESPGKSFQPITMS K I V G K S 0 0 1 0 0 2 1 1 0 1 0 1 0 0 4 2 0 0 0 2 0 0 15 0 1575.8257 Q9ULM3 Q9ULM3 436 450 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.00055156 85.362 By MS/MS By MS/MS 1 1 13715000 8225900 5489500 2666 2853 2947 6649;6650 6114;6115;6116 6115 5872;5873 3 IVPQSQVPNPESPGKSFQPITMSCK QPIASSCKIVPQSQVP QPITMSCKIVSGSPIS K I V C K I 0 0 1 0 1 3 1 1 0 2 0 2 1 1 5 4 1 0 0 2 0 0 25 1 2755.3673 Q9ULM3 Q9ULM3 436 460 YEATS2 YEATS domain-containing protein 2 yes yes 3 0.0038154 49.662 By matching By MS/MS 1 1 9062200 5415400 3646800 2667 2853 2948 6651;6652 6117 6117 5872;5873 1 IVPSYRTQSSSCEDLPSTTQPK MRGSITFKIVPSYRTQ LPSTTQPKGRQIYVRA K I V P K G 0 1 0 1 1 2 1 0 0 1 1 1 0 0 3 5 3 0 1 1 0 0 22 1 2480.1853 Q5JS72 Q5JS72 182 203 CASK yes yes 3 0.00011092 73.688 By MS/MS By MS/MS 1 1 8536200 5409700 3126500 2668 2072 2949 6653;6654 6118;6119;6120 6119 4068;4069;7740 2 IVRGDQPAASGDSDDDEPPPLPR LCIFLLYKIVRGDQPA DEPPPLPRLKRRDFTP K I V P R L 2 2 0 5 0 1 1 2 0 1 1 0 0 0 5 2 0 0 0 1 0 0 23 1 2403.1302 O00264 O00264 45 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 2.5635E-25 120.57 By MS/MS By MS/MS 1 1 76221000 40298000 35923000 2669 1327 2950 6655;6656 6121;6122;6123;6124;6125 6122 2393;2394 5 IVSAQSLAEDDVE KLPTISQRIVSAQSLA SLAEDDVE________ R I V V E - 2 0 0 2 0 1 2 0 0 1 1 0 0 0 0 2 0 0 0 2 0 0 13 0 1374.6515 Q15388 Q15388 133 145 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 2 0.00019365 112.08 By MS/MS By MS/MS 3 3 69457000 35483000 33974000 2670 1987 2951;2952 6657;6658;6659;6660;6661;6662 6126;6127;6128;6129;6130;6131 6130 3880;3881 6 IVSGSPISTPSPSPLPR QPITMSCKIVSGSPIS PSPSPLPRTPTSTPVH K I V P R T 0 1 0 0 0 0 0 1 0 2 1 0 0 0 5 5 1 0 0 1 0 0 17 0 1690.9254 Q9ULM3 Q9ULM3 461 477 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0026376 68.257 By MS/MS By matching 1 1 6332600 3702900 2629700 2671 2853 2953 6663;6664 6132 6132 5874;5875 1 IVSSFKTTTSR TYKASTSKIVSSFKTT SFKTTTSRAACQLVKE K I V S R A 0 1 0 0 0 0 0 0 0 1 0 1 0 1 0 3 3 0 0 1 0 0 11 1 1225.6667 E7EQ49;A0A087WTQ2;Q9Y2I8;C9JGR9 E7EQ49 133 143 WDR37 WD repeat-containing protein 37 yes no 2 0.011933 77.387 By matching By MS/MS 1 1 9010500 5028400 3982100 2672 29 2954 6665;6666 6133 6133 57;58 0 IVSVDKQQQWLLYLSNSGYLK LALALLDRIVSVDKQQ LSNSGYLKVLVDSLVE R I V L K V 0 0 1 1 0 3 0 1 0 1 4 2 0 0 0 3 0 1 2 2 0 0 21 1 2481.3268 Q92621;U3KPX2 Q92621 1503 1523 NUP205 Nuclear pore complex protein Nup205 yes no 3 0.010351 43.534 By MS/MS 1 2578900 0 2578900 2673 2429 2955 6667 6134 6134 4884;7824 1 IVVVTAGVR YSVTANSKIVVVTAGV VVVTAGVRQQEGESRL K I V V R Q 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 4 0 0 9 0 912.57565 P07195;A8MW50;F5H793;C9J7H8 P07195 92 100 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 2 0.0057596 109.01 By MS/MS By MS/MS 1 1 8255700 5582400 2673300 2674 1535 2956 6668;6669 6135;6136 6136 2 IWEERVSLTK EFQHKLVRIWEERVSL EERVSLTKLREKVTRE R I W T K L 0 1 0 0 0 0 2 0 0 1 1 1 0 0 0 1 1 1 0 1 0 0 10 1 1259.6874 Q96DD0 Q96DD0 42 51 LRRC39 Leucine-rich repeat-containing protein 39 yes yes 3 0.015647 57.52 By MS/MS 1 9505500 0 9505500 2675 2472 2957 6670 6137 6137 4977 1 IWEREPAPLLSAQYETLSDSDD AAPHQQNRIWEREPAP ETLSDSDD________ R I W D D - 2 1 0 3 0 1 3 0 0 1 3 0 0 0 2 3 1 1 1 0 0 0 22 1 2534.1813 A0A088AWL3;O75376;E7EVK1 A0A088AWL3 2322 2343 NCOR1 Nuclear receptor corepressor 1 yes no 2 0.017342 49.528 By matching By MS/MS 1 1 5838100 3359200 2479000 2676 151 2958 6671;6672 6138 6138 265;266 1 IWSPTIGR GQTYNPWRIWSPTIGR IWSPTIGRRSSDPWSN R I W G R R 0 1 0 0 0 0 0 1 0 2 0 0 0 0 1 1 1 1 0 0 0 0 8 0 928.51305 Q92545 Q92545 1861 1868 TMEM131 Transmembrane protein 131 yes yes 2 0.0069414 99.013 By MS/MS By MS/MS 1 1 10739000 6388300 4351100 2677 2423 2959 6673;6674 6139;6140 6139 4871 2 IYALNENVSSFR EFEEFSRRIYALNENV NENVSSFRRPRRSSDK R I Y F R R 1 1 2 0 0 0 1 0 0 1 1 0 0 1 0 2 0 0 1 1 0 0 12 0 1411.7096 E9PR71;Q9P2Y5 E9PR71 579 590 UVRAG UV radiation resistance-associated gene protein yes no 2 0.0078388 64.82 By MS/MS 1 1091400 1091400 0 2678 841 2960 6675 6141 6141 7393 1 IYASSSPPDTGQR EPERLENRIYASSSPP SPPDTGQRFCPSSFQS R I Y Q R F 1 1 0 1 0 1 0 1 0 1 0 0 0 0 2 3 1 0 1 0 0 0 13 0 1377.6525 F8WDA1;E9PGP6;Q9UGJ0 F8WDA1 191 203 PRKAG2 5-AMP-activated protein kinase subunit gamma-2 yes no 2 0.0013352 96.371 By MS/MS By MS/MS 2 2 7258300 4949100 2309200 2679 794 2961 6676;6677;6678;6679 6142;6143;6144;6145 6142 1425 4 IYEDGDDDMKR GLMNVLKKIYEDGDDD DGDDDMKRTINKAWVE K I Y K R T 0 1 0 4 0 0 1 1 0 1 0 1 1 0 0 0 0 0 1 0 0 0 11 1 1355.5663 Q9HB71 Q9HB71 198 208 CACYBP Calcyclin-binding protein yes yes 2;3 2.3592E-06 153.05 By MS/MS By MS/MS 3 3 13623000 7219600 6402900 2680 2686 2962 6680;6681;6682;6683;6684;6685 6146;6147;6148;6149;6150 6149 7897 3 IYEPLDVK ADPDEFERIYEPLDVK IYEPLDVKSKKIHVVD R I Y V K S 0 0 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 0 1 1 0 0 8 0 975.5277 P47712 P47712 534 541 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 2 1.8741E-06 164.53 By MS/MS By MS/MS 1 1 5640900 3177700 2463200 2681 1716 2963 6686;6687 6151;6152 6152 7625 2 IYERPSTTCSKPQR NPSAPLRRIYERPSTT TTCSKPQRVKQNSESE R I Y Q R V 0 2 0 0 1 1 1 0 0 1 0 1 0 0 2 2 2 0 1 0 0 0 14 2 1721.8519 Q9BVA0 Q9BVA0 336 349 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 yes yes 3 0.0002443 103.14 By MS/MS By matching 1 1 6746700 3825000 2921700 2682 2585 2964 6688;6689 6153 6153 7872 1 IYESIEEAK ARLADKNKIYESIEEA YESIEEAKSEAMKEME K I Y A K S 1 0 0 0 0 0 3 0 0 2 0 1 0 0 0 1 0 0 1 0 0 0 9 0 1080.5339 Q14DU5;E9PF63;O75116 Q14DU5 36 44 ROCK2 Rho-associated protein kinase 2 yes no 2 0.0018846 95.815 By MS/MS By matching 1 1 7121600 4196000 2925600 2683 776 2965 6690;6691 6154 6154 7379 1 IYHLPDAESDEDEDFKEQTR EIEEHNIKIYHLPDAE EDFKEQTRLLKASIPF K I Y T R L 1 1 0 4 0 1 4 0 1 1 1 1 0 1 1 1 1 0 1 0 0 0 20 1 2436.0717 H7C2Y0;B5MCX3;Q15019 H7C2Y0 65 84 SEPT2 Septin-2 yes no 2;3;4 8.4959E-14 119.38 By MS/MS By MS/MS 3 3 2185100000 1155300000 1029800000 2684 505 2966 6692;6693;6694;6695;6696;6697 6155;6156;6157;6158;6159;6160;6161;6162 6159 945 8 IYHLPDAESDEDEDFKEQTRLLK EIEEHNIKIYHLPDAE KEQTRLLKASIPFSVV K I Y L K A 1 1 0 4 0 1 4 0 1 1 3 2 0 1 1 1 1 0 1 0 0 0 23 2 2790.3348 H7C2Y0;B5MCX3;Q15019 H7C2Y0 65 87 SEPT2 Septin-2 yes no 4 0.0024199 50.493 By MS/MS By matching 1 1 15827000 7109000 8717700 2685 505 2967 6698;6699 6163 6163 945 1 IYIDPFTYEDPNEAVR GHMTPGMKIYIDPFTY EDPNEAVREFAKEIDI K I Y V R E 1 1 1 2 0 0 2 0 0 2 0 0 0 1 2 0 1 0 2 1 0 0 16 0 1940.9156 B1AKC9;P29323;P54762 B1AKC9 590 605 EPHB2;EPHB1 Receptor protein-tyrosine kinase;Ephrin type-B receptor 2;Ephrin type-B receptor 1 yes no 2;3 1.2094E-21 143.38 By MS/MS By MS/MS 2 2 40498000 16575000 23922000 2686 455 2968 6700;6701;6702;6703 6164;6165;6166;6167;6168 6167 7277;7278 5 IYLEENPEKSETIQDTDTQSLVGSPSTR PKSGPKERIYLEENPE LVGSPSTRIAPHIIGA R I Y T R I 0 1 1 2 0 2 4 1 0 2 2 1 0 0 2 4 4 0 1 1 0 0 28 1 3136.5048 Q9NZN5;E9PMR6 Q9NZN5 318 345 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 3 0.0010732 55.425 By MS/MS By matching 1 1 93583000 44341000 49243000 2687 2770 2969 6704;6705 6169 6169 5687 1 IYLESEHGSPLTPR AQNTHGLRIYLESEHG HGSPLTPRVGIPSGLG R I Y P R V 0 1 0 0 0 0 2 1 1 1 2 0 0 0 2 2 1 0 1 0 0 0 14 0 1597.81 Q9H165;A0A0J9YXG2 Q9H165 197 210 BCL11A B-cell lymphoma/leukemia 11A yes no 2 0.0047387 78.932 By matching By MS/MS 1 1 21327000 12791000 8536000 2688 2634 2970 6706;6707 6170 6170 5360;7045 1 IYNISGNGSPLADSK RTPAAGERIYNISGNG GSPLADSKEIFLTVPV R I Y S K E 1 0 2 1 0 0 0 2 0 2 1 1 0 0 1 3 0 0 1 0 0 0 15 0 1534.7627 Q53HL2 Q53HL2 211 225 CDCA8 Borealin yes yes 2 0.0021204 87.388 By MS/MS By MS/MS 2 2 46143000 26758000 19385000 2689 2061 2971;2972 6708;6709;6710;6711 6171;6172;6173 6172 4049 3 IYNISGNGSPLADSKEIFLTVPVGGGESLR RTPAAGERIYNISGNG VGGGESLRLLASDLQR R I Y L R L 1 1 2 1 0 0 2 5 0 3 3 1 0 1 2 4 1 0 1 2 0 0 30 1 3089.6033 Q53HL2 Q53HL2 211 240 CDCA8 Borealin yes yes 3 0.00023782 60.348 By MS/MS 1 52738000 52738000 0 2690 2061 2973 6712 6174 6174 4049 1 IYSFNSTNDSSGPANLDK PRVKQGPKIYSFNSTN SGPANLDKSILKVVIN K I Y D K S 1 0 3 2 0 0 0 1 0 1 1 1 0 1 1 4 1 0 1 0 0 0 18 0 1928.8752 A0A087WYN9;Q7Z478 A0A087WYN9 66 83 DHX29 ATP-dependent RNA helicase DHX29 yes no 2 1.0361E-05 94.781 By MS/MS By MS/MS 1 1 8799600 5394900 3404700 2691 98 2974 6713;6714 6175;6176 6175 184 2 IYSYMSPNK NVFTGQSKIYSYMSPN YSYMSPNKCSGMRFPL K I Y N K C 0 0 1 0 0 0 0 0 0 1 0 1 1 0 1 2 0 0 2 0 0 0 9 0 1101.5165 C9JKQ0;A0A0C4DFR3;Q9NQR1 C9JKQ0 45 53 SETD8 N-lysine methyltransferase SETD8 yes no 2 0.02687 49.423 By MS/MS By matching 1 1 4366500 2298200 2068200 2692 267 2975 6715;6716 6177 6177 7218 0 IYSYVVSRPQPR QVNTADHRIYSYVVSR VVSRPQPRGLLGWGYY R I Y P R G 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 2 0 0 2 2 0 0 12 1 1463.7885 Q96CS3 Q96CS3 78 89 FAF2 FAS-associated factor 2 yes yes 2;3 0.00051712 98.04 By MS/MS By MS/MS 2 2 39284000 23075000 16209000 2693 2466 2976 6717;6718;6719;6720 6178;6179;6180;6181 6180 7838 4 KAALSSPR TKPPKSRRKAALSSPR KAALSSPRSRKNATQP R K A P R S 2 1 0 0 0 0 0 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 8 1 828.48175 Q68E01 Q68E01 990 997 INTS3 Integrator complex subunit 3 yes yes 2 0.0023806 114.86 By MS/MS By MS/MS 1 1 4827600 0 4827600 2694 2136 2977 6721;6722 6182;6183 6182 4246;4247 2 KAASLMNLENI SVITVQRRKAASLMNL SLMNLENI________ R K A N I - 2 0 2 0 0 0 1 0 0 1 2 1 1 0 0 1 0 0 0 0 0 0 11 1 1202.6329 D6RBP0;Q96NL6 D6RBP0 274 284 SCLT1 Sodium channel and clathrin linker 1 yes no 2 0.00024329 115.57 By MS/MS By MS/MS 1 1 3277600 1409800 1867800 2695 662 2978 6723;6724 6184;6185 6184 1191 2 KAASPSPQSVR TPEPKKIKKAASPSPQ SPSPQSVRRVSSSRSV K K A V R R 2 1 0 0 0 1 0 0 0 0 0 1 0 0 2 3 0 0 0 1 0 0 11 1 1126.6095 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 744 754 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0010503 87.083 By MS/MS By MS/MS 4 3 51064000 37465000 13599000 2696 442 2979;2980 6725;6726;6727;6728;6729;6730;6731 6186;6187;6188;6189;6190;6191;6192 6189 830;831;832 7 KAASTDLGAGETVVGK NRGRRQAKKAASTDLG AGETVVGKVLEITELP K K A G K V 3 0 0 1 0 0 1 3 0 0 1 2 0 0 0 1 2 0 0 2 0 0 16 1 1502.794 H7C207;Q15032 H7C207 694 709 R3HDM1 R3H domain-containing protein 1 yes no 2 6.0784E-29 163.11 By MS/MS By MS/MS 1 1 35844000 18935000 16910000 2697 1172 2981 6732;6733 6193;6194 6194 2130 2 KAAVLSDSEDEEKASAK EEEKVAKRKAAVLSDS DEEKASAKKSRVVSDA R K A A K K 4 0 0 2 0 0 3 0 0 0 1 3 0 0 0 3 0 0 0 1 0 0 17 2 1776.8741 Q96ST2 Q96ST2 393 409 IWS1 Protein IWS1 homolog yes yes 3 0.0025593 67.994 By MS/MS By MS/MS 1 1 35108000 19222000 15886000 2698 2541 2982 6734;6735 6195;6196 6196 5123;5124 2 KADIVFLLDGSINFR PPSRPEKKKADIVFLL LDGSINFRRDSFQEVL K K A F R R 1 1 1 2 0 0 0 1 0 2 2 1 0 2 0 1 0 0 0 1 0 0 15 1 1706.9356 E7ENL6;P12111 E7ENL6 1030 1044 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.0038666 73.833 By MS/MS 1 0 0 0 2699 710 2983 6736 6197 6197 1 KADTTTPTPTAILAPGSPASPPGSLEPK AKKKGVKRKADTTTPT PPGSLEPKAARLPPMR R K A P K A 4 0 0 1 0 0 1 2 0 1 2 2 0 0 7 3 5 0 0 0 0 0 28 1 2701.4174 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;H0YDJ7;U3KPW0;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2 H0Y6K2 288 315 BRD2 Bromodomain-containing protein 2 yes no 3 1.6123E-09 84.878 By MS/MS By MS/MS 3 2 174180000 114770000 59409000 2700 321 2984;2985 6737;6738;6739;6740;6741 6198;6199;6200;6201;6202;6203;6204;6205;6206;6207;6208;6209;6210 6205 586;587;588 13 KAEDSDSEPEPEDNVR SPLGGIKRKAEDSDSE PEPEDNVRLWEAGWKQ R K A V R L 1 1 1 3 0 0 4 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 16 1 1815.7759 Q9H0D6 Q9H0D6 495 510 XRN2 5-3 exoribonuclease 2 yes yes 2;3 3.7165E-44 175.16 By MS/MS By MS/MS 3 3 196090000 84233000 111860000 2701 2626 2986;2987 6742;6743;6744;6745;6746;6747 6211;6212;6213;6214;6215;6216;6217;6218 6214 5331;5332 8 KAEDSDSEPEPEDNVRLWEAGWK SPLGGIKRKAEDSDSE RLWEAGWKQRYYKNKF R K A W K Q 2 1 1 3 0 0 5 1 0 0 1 2 0 0 2 2 0 2 0 1 0 0 23 2 2686.2147 Q9H0D6 Q9H0D6 495 517 XRN2 5-3 exoribonuclease 2 yes yes 3 1.191E-05 79.293 By MS/MS By MS/MS 1 1 63478000 39851000 23627000 2702 2626 2988 6748;6749 6219;6220 6220 5331;5332 2 KAEGEPQEESPLK GSQEKQTKKAEGEPQE PQEESPLKSKSQEEPK K K A L K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 13 1 1440.7096 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 168 180 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 3.8151E-64 207.85 By MS/MS By MS/MS 1 2 65488000 32083000 33406000 2703 2759 2989 6750;6751;6752 6221;6222 6222 5641 2 KAEGEPQEESPLKSK GSQEKQTKKAEGEPQE EESPLKSKSQEEPKDT K K A S K S 1 0 0 0 0 1 4 1 0 0 1 3 0 0 2 2 0 0 0 0 0 0 15 2 1655.8366 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 168 182 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 1.6662E-06 118.23 By MS/MS By matching 2 2 319060000 172970000 146090000 2704 2759 2990 6753;6754;6755;6756 6223;6224 6223 5641 2 KAEPSEVDMNSPK PKAKQVKKKAEPSEVD EVDMNSPKSKKAKKKE K K A P K S 1 0 1 1 0 0 2 0 0 0 0 2 1 0 2 2 0 0 0 1 0 0 13 1 1430.6711 Q9NR30 Q9NR30 61 73 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.0006557 108.31 By MS/MS By MS/MS 1 2 9894700 4433300 5461400 2705 2716 2991 6757;6758;6759 6225;6226;6227 6227 356 5542 3 KAEPSEVDMNSPKSK PKAKQVKKKAEPSEVD DMNSPKSKKAKKKEEP K K A S K K 1 0 1 1 0 0 2 0 0 0 0 3 1 0 2 3 0 0 0 1 0 0 15 2 1645.7981 Q9NR30 Q9NR30 61 75 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.026785 50.04 By MS/MS By matching 1 1 6489400 3361600 3127800 2706 2716 2992 6760;6761 6228 6228 5542 0 KAEQGSEEEGEGEEEEEEGGESKADDPYAHLSK KQGKEKAKKAEQGSEE DPYAHLSKKEKKKLKK K K A S K K 3 0 0 2 0 1 12 5 1 0 1 3 0 0 1 3 0 0 1 0 0 0 33 2 3578.4928 Q5STZ8;Q8NE71 Q5STZ8 224 256 ABCF1 ATP-binding cassette sub-family F member 1 yes no 4 1.2952E-05 64.806 By MS/MS By MS/MS 1 1 71870000 46849000 25021000 2707 2088 2993 6762;6763 6229;6230 6229 4117 2 KAESPVKEEAVAEVVTITK PKDVPEKKKAESPVKE AEVVTITKSVKVHLEK K K A T K S 3 0 0 0 0 0 4 0 0 1 0 3 0 0 1 1 2 0 0 4 0 0 19 2 2027.115 E7ESP9;P07197 E7ESP9 694 712 NEFM Neurofilament medium polypeptide yes no 3 2.2059E-06 96.777 By MS/MS By MS/MS 1 1 9454600 3999100 5455500 2708 734 2994 6764;6765 6231;6232 6232 1311 2 KALAAAGYDVEK GVSLAALKKALAAAGY AAGYDVEKNNSRIKLG K K A E K N 4 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 1 1 0 0 12 1 1234.6558 P16402;P16403;Q02539;P22492;P10412 P10412 64 75 HIST1H1D;HIST1H1C;HIST1H1A;HIST1H1T;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.1;Histone H1t;Histone H1.4 no no 2;3 0.00024902 102.87 By MS/MS By MS/MS 2 2 6533700 3107600 3426100 2709 1556;1586 2995 6766;6767;6768;6769 6233;6234;6235;6236 6235 3 KALAAAGYDVEKNNSR GVSLAALKKALAAAGY DVEKNNSRIKLGLKSL K K A S R I 4 1 2 1 0 0 1 1 0 0 1 2 0 0 0 1 0 0 1 1 0 0 16 2 1705.8747 P16402;P16403;Q02539;P22492;P10412 P10412 64 79 HIST1H1D;HIST1H1C;HIST1H1A;HIST1H1T;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.1;Histone H1t;Histone H1.4 no no 3 2.4698E-05 118.71 By MS/MS By matching 1 1 8768000 4690700 4077200 2710 1556;1586 2996 6770;6771 6237 6237 1 KALVVPEPEPDSDSNQER LGDLLTERKALVVPEP DSDSNQERKDD_____ R K A E R K 1 1 1 2 0 1 3 0 0 0 1 1 0 0 3 2 0 0 0 2 0 0 18 1 2008.9702 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 125 142 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 2;3 0.00065308 74.147 By MS/MS By MS/MS 2 2 34277000 17086000 17191000 2711 547 2997 6772;6773;6774;6775 6238;6239;6240 6239 998;999 3 KAPAGQEEPGTPPSSPLSAEQLDR DAAAIPAKKAPAGQEE LSAEQLDRIQRNKAAA K K A D R I 3 1 0 1 0 2 3 2 0 0 2 1 0 0 5 3 1 0 0 0 0 0 24 1 2461.2085 P13051;Q68DM5;F5GYA2 P13051 50 73 UNG;DKFZp781L1143 Uracil-DNA glycosylase yes no 3 1.9153E-25 120.64 By MS/MS By MS/MS 2 2 88393000 46913000 41480000 2712 1574 2998;2999 6776;6777;6778;6779 6241;6242;6243;6244 6243 2891;2892;6671 4 KAPSEISR TTVKEMSKKAPSEISR KAPSEISRKYQSEFEE K K A S R K 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 2 0 0 0 0 0 0 8 1 886.48723 E9PDN5;A0A075B6G3;P11532;A0A087WV90;A0A087WTU7 E9PDN5 1005 1012 DMD Dystrophin yes no 2 0.030165 81.525 By matching By MS/MS 1 1 167370000 102480000 64888000 2713 6 3000 6780;6781 6245 6245 1 KAPTNEFYA LGKKPIYKKAPTNEFY APTNEFYA________ K K A Y A - 2 0 1 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 9 1 1039.4975 P31431 P31431 190 198 SDC4 Syndecan-4 yes yes 2 0.018958 86.833 By MS/MS By matching 1 1 4992400 2679100 2313300 2714 1660 3001 6782;6783 6246 6246 7590 1 KARDMDLTEVITGTLWNLSSHDSIK PALVRLLRKARDMDLT LSSHDSIKMEIVDHAL R K A I K M 1 1 1 3 0 0 1 1 1 2 3 2 1 0 0 3 3 1 0 1 0 0 25 2 2829.4331 C9JZR2;O60716 C9JZR2 462 486 CTNND1 Catenin delta-1 yes no 3 0.0053828 51.834 By MS/MS 1 3883700 3883700 0 2715 624 3002 6784 6247 6247 1133;1134;1135 1 KASAQASLASK VTKTFKTRKASAQASL AQASLASKDKTPKSKS R K A S K D 4 0 0 0 0 1 0 0 0 0 1 2 0 0 0 3 0 0 0 0 0 0 11 1 1060.5877 A6NNN6;E7ETA6;Q15154 A6NNN6 1282 1292 PCM1 Pericentriolar material 1 protein yes no 2 0.0091222 79.744 By matching By MS/MS 1 2 5881500 1409600 4471900 2716 423 3003 6785;6786;6787 6248;6249 6249 794 2 KASEEIEDFR VKASKFRRKASEEIED SEEIEDFRLRPQSLNG R K A F R L 1 1 0 1 0 0 3 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 10 1 1222.583 Q96FT9 Q96FT9 76 85 IFT43 Intraflagellar transport protein 43 homolog yes yes 2 0.0044712 92.151 By MS/MS By MS/MS 1 1 31204000 17483000 13721000 2717 2485 3004 6788;6789 6250;6251 6251 5011 2 KASGPPVSELITK KSAGAAKRKASGPPVS PVSELITKAVAASKER R K A T K A 1 0 0 0 0 0 1 1 0 1 1 2 0 0 2 2 1 0 0 1 0 0 13 1 1325.7555 P16402;P16403;P10412 P10412 34 46 HIST1H1D;HIST1H1C;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.4 no no 2;3 9.0689E-21 165.24 By MS/MS By MS/MS 2 5 54321000 28205000 26115000 2718 1556;1586 3005;3006 6790;6791;6792;6793;6794;6795;6796 6252;6253;6254;6255;6256;6257 6254 2859 5 KASGSENEGDYNPGR KGRGAKKRKASGSENE EGDYNPGRKTSKTTSK R K A G R K 1 1 2 1 0 0 2 3 0 0 0 1 0 0 1 2 0 0 1 0 0 0 15 1 1579.6863 Q02880 Q02880 1548 1562 TOP2B DNA topoisomerase 2-beta yes yes 2 0.00078132 99.711 By MS/MS By MS/MS 2 3 30668000 13387000 17281000 2719 1842 3007;3008 6797;6798;6799;6800;6801 6258;6259;6260;6261 6259 3448;3449 4 KASGSENEGDYNPGRK KGRGAKKRKASGSENE GDYNPGRKTSKTTSKK R K A R K T 1 1 2 1 0 0 2 3 0 0 0 2 0 0 1 2 0 0 1 0 0 0 16 2 1707.7812 Q02880 Q02880 1548 1563 TOP2B DNA topoisomerase 2-beta yes yes 3 7.5005E-10 124.2 By MS/MS By MS/MS 2 3 23848000 15111000 8736700 2720 1842 3009;3010 6802;6803;6804;6805;6806 6262;6263;6264;6265;6266;6267 6264 3448;3449 6 KASPEPEGEAAGK LAPTPRRRKASPEPEG PEGEAAGKMTTEEQQQ R K A G K M 3 0 0 0 0 0 3 2 0 0 0 2 0 0 2 1 0 0 0 0 0 0 13 1 1269.6201 Q8IU81 Q8IU81 382 394 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2 0.0029609 95.236 By MS/MS By MS/MS 1 2 18464000 8696400 9767800 2721 2260 3011 6807;6808;6809 6268;6269;6270;6271;6272 6271 4538 5 KASPEPPDSAEGALK AAASLRKRKASPEPPD DSAEGALKLGEEQQRQ R K A L K L 3 0 0 1 0 0 2 1 0 0 1 2 0 0 3 2 0 0 0 0 0 0 15 1 1495.7518 Q9H1B7 Q9H1B7 545 559 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 2 0.00075072 97.129 By MS/MS By MS/MS 1 1 41087000 21793000 19294000 2722 2636 3012 6810;6811 6273;6274 6274 5368 2 KASPEPPDSAEGALKLGEEQQR AAASLRKRKASPEPPD KLGEEQQRQQWMANQS R K A Q R Q 3 1 0 1 0 2 4 2 0 0 2 2 0 0 3 2 0 0 0 0 0 0 22 2 2336.1608 Q9H1B7 Q9H1B7 545 566 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 3 0.0018259 58.835 By matching By MS/MS 1 1 8814800 4568600 4246200 2723 2636 3013 6812;6813 6275 6275 5368 1 KASPPSGLWSPAYASH PNALPPARKASPPSGL WSPAYASH________ R K A S H - 3 0 0 0 0 0 0 1 1 0 1 1 0 0 3 4 0 1 1 0 0 0 16 1 1654.8104 Q8TEM1 Q8TEM1 1872 1887 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2;3 0.0014223 81.992 By MS/MS By MS/MS 2 2 9635100 6460000 3175100 2724 2390 3014 6814;6815;6816;6817 6276;6277;6278 6276 4778 3 KASQLVGIEK VHNSTQKRKASQLVGI SQLVGIEKKFHPDV__ R K A E K K 1 0 0 0 0 1 1 1 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1071.6288 Q9NPD8 Q9NPD8 182 191 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 2 0.0021928 106.55 By MS/MS By MS/MS 1 1 10059000 5029400 5029900 2725 2704 3015 6818;6819 6279;6280 6279 5514 2 KASSEGGTAAGAGLDSLHK ERFQNLDKKASSEGGT AGLDSLHKNSVSQISV K K A H K N 4 0 0 1 0 0 1 4 1 0 2 2 0 0 0 3 1 0 0 0 0 0 19 1 1755.8751 O15143 O15143 308 326 ARPC1B Actin-related protein 2/3 complex subunit 1B yes yes 3 3.3258E-07 102.39 By MS/MS By MS/MS 1 1 4582000 2101400 2480600 2726 1361 3016 6820;6821 6281;6282 6282 2487;2488 2 KASVVDPSTESSPAPQEGSEQPASPASPLSSR QPGSIGSRKASVVDPS PASPLSSRQSFCAQEA R K A S R Q 4 1 0 1 0 2 3 1 0 0 1 1 0 0 6 9 1 0 0 2 0 0 32 1 3179.5218 Q66K14 Q66K14 409 440 TBC1D9B TBC1 domain family member 9B yes yes 3 3.1597E-11 81.406 By MS/MS By MS/MS 3 3 99021000 69923000 29099000 2727 2130 3017;3018 6822;6823;6824;6825;6826;6827 6283;6284;6285;6286 6286 4236;4237;4238 4 KAVPMAPAPASPGSSNDSSAR SPCEFEHRKAVPMAPA SSNDSSARSQERAGGL R K A A R S 5 1 1 1 0 0 0 1 0 0 0 1 1 0 4 5 0 0 0 1 0 0 21 1 1996.9636 Q66K74 Q66K74 749 769 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3 2.8847E-09 95.444 By MS/MS By MS/MS 1 1 29870000 17919000 11951000 2728 2131 3019 6828;6829 6287;6288 6287 4240 2 KAVVLPGGTATSPK LMAASVARKAVVLPGG GGTATSPKMIAKNVLG R K A P K M 2 0 0 0 0 0 0 2 0 0 1 2 0 0 2 1 2 0 0 2 0 0 14 1 1324.7715 Q8N1G0;F8WCX2;H0Y5I5 Q8N1G0 422 435 ZNF687 Zinc finger protein 687 yes no 2 4.9675E-05 118.52 By MS/MS By MS/MS 1 1 17168000 8749000 8418600 2729 2298 3020 6830;6831 6289;6290 6290 4618;6953;6954 2 KCSLPAEEDSVLEK ETVTGTGKKCSLPAEE EEDSVLEKLGERKPCN K K C E K L 1 0 0 1 1 0 3 0 0 0 2 2 0 0 1 2 0 0 0 1 0 0 14 1 1603.7763 E7EVA0;P27816 E7EVA0 651 664 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.002961 62.658 By MS/MS By MS/MS 1 1 5287900 2732800 2555100 2730 742 3021 6832;6833 6291;6292 6292 1345 2 KDCGQYSVTLR LCLPSAGRKDCGQYSV GQYSVTLRSEGGSVQA R K D L R S 0 1 0 1 1 1 0 1 0 0 1 1 0 0 0 1 1 0 1 1 0 0 11 1 1325.6398 H7BZ61;Q86VF2 H7BZ61 491 501 IGFN1 Immunoglobulin-like and fibronectin type III domain-containing protein 1 yes no 2 0.016017 50.034 By MS/MS 1 0 0 0 2731 1157 3022 6834 6293 6293 2106 1 KDDDSDDESQSSHTGK KKVKKKGRKDDDSDDE SQSSHTGKKKPEISFM R K D G K K 0 0 0 5 0 1 1 1 1 0 0 2 0 0 0 4 1 0 0 0 0 0 16 1 1749.6925 O94874 O94874 454 469 UFL1 E3 UFM1-protein ligase 1 yes yes 2;3 5.0783E-06 116.04 By MS/MS By matching 2 2 66077000 28259000 37818000 2732 1466 3023 6835;6836;6837;6838 6294;6295 6295 2718 2 KDDDSDDESQSSHTGKK KKVKKKGRKDDDSDDE QSSHTGKKKPEISFMF R K D K K K 0 0 0 5 0 1 1 1 1 0 0 3 0 0 0 4 1 0 0 0 0 0 17 2 1877.7875 O94874 O94874 454 470 UFL1 E3 UFM1-protein ligase 1 yes yes 3 2.2003E-05 94.176 By matching By MS/MS 1 1 6400200 3232500 3167700 2733 1466 3024 6839;6840 6296 6296 2718 1 KDDSDDDGGGWITPSNIK EENGFEDRKDDSDDDG WITPSNIKQIQQELEQ R K D I K Q 0 0 1 5 0 0 0 3 0 2 0 2 0 0 1 2 1 1 0 0 0 0 18 1 1918.8545 Q9ULX3 Q9ULX3 198 215 NOB1 RNA-binding protein NOB1 yes yes 3 2.5138E-06 96.341 By matching By MS/MS 1 1 17378000 9627900 7749900 2734 2855 3025 6841;6842 6297 6297 5881 1 KDDSHSAEDSEDEKEDHK EDKDVKTKKDDSHSAE EDEKEDHKNVRQQRQA K K D H K N 1 0 0 5 0 0 4 0 2 0 0 3 0 0 0 3 0 0 0 0 0 0 18 2 2099.8516 Q9H1E3 Q9H1E3 70 87 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.00014652 80.016 By MS/MS 2 7081800 0 7081800 2735 2637 3026;3027 6843;6844 6298;6299 6298 5372 2 KDLADKETLENMMQR KVLDNQIKKDLADKET TLENMMQRHEEEAHEK K K D Q R H 1 1 1 2 0 1 2 0 0 0 2 2 2 0 0 0 1 0 0 0 0 0 15 2 1820.8761 H7BYJ3;O14578 H7BYJ3 362 376 CIT Citron Rho-interacting kinase yes no 2 0.02397 51.092 By MS/MS 1 0 0 0 2736 1153 3028 6845 6300 6300 1 KDLFMNTLYLK YHELIPSRKDLFMNTL FMNTLYLKYSNILLNC R K D L K Y 0 0 1 1 0 0 0 0 0 0 3 2 1 1 0 0 1 0 1 0 0 0 11 1 1384.7425 Q9NZJ4 Q9NZJ4 3185 3195 SACS Sacsin no no 1 NaN 0 0 0 2737 2768 0 KDLMLEEKNK RGFIESGKKDLMLEEK LMLEEKNKKLMNECDH K K D N K K 0 0 1 1 0 0 2 0 0 0 2 3 1 0 0 0 0 0 0 0 0 0 10 2 1246.6591 Q8NF67 Q8NF67 66 75 ANKRD20A12P Putative ankyrin repeat domain-containing protein 20A12 pseudogene yes yes 3 0.016526 48.284 By MS/MS 1 0 0 0 2738 2352 3029 6846 6301 6301 315 1 KDLYANTVLSGGTTMYPGIADR MKCDVDIRKDLYANTV MYPGIADRMQKEITAL R K D D R M 2 1 1 2 0 0 0 3 0 1 2 1 1 0 1 1 3 0 2 1 0 0 22 1 2342.1576 P63261;P60709 P63261 291 312 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 3 0.00020432 69.084 By MS/MS By MS/MS 1 1 17318000 8535900 8781700 2739 1785 3030 6847;6848 6302;6303 6303 226 2 KDNEESEQPPVPGTPTLR IDFGSLLKKDNEESEQ VPGTPTLRNRTFSESS K K D L R N 0 1 1 1 0 1 3 1 0 0 1 1 0 0 4 1 2 0 0 1 0 0 18 1 1992.9752 O15439 O15439 633 650 ABCC4 Multidrug resistance-associated protein 4 yes yes 2;3 6.9987E-05 87.088 By MS/MS By MS/MS 2 2 24416000 12803000 11613000 2740 1366 3031 6849;6850;6851;6852 6304;6305;6306 6305 6605 3 KDNSILEIR DYMESGTKKDNSILEI DNSILEIRGPGLQMLP K K D I R G 0 1 1 1 0 0 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 9 1 1086.6033 Q9NZU1;Q9NZU0 Q9NZU1 579 587 FLRT1;FLRT3 Leucine-rich repeat transmembrane protein FLRT1;Leucine-rich repeat transmembrane protein FLRT3 yes no 2 0.0064214 79.036 By MS/MS 1 0 0 0 2741 2771 3032 6853 6307 6307 5690 1 KDPFSPDKK ELQSRKKRKDPFSPDK DPFSPDKKKPVVVSGP R K D K K K 0 0 0 2 0 0 0 0 0 0 0 3 0 1 2 1 0 0 0 0 0 0 9 2 1060.5553 H0YHD0;Q5PSV4 H0YHD0 108 116 BRMS1L Breast cancer metastasis-suppressor 1-like protein yes no 3 0.01426 58.63 By MS/MS 1 0 0 0 2742 1074 3033 6854 6308 6308 1985 1 KDRILNTHLLTGLR K D L R 0 2 1 1 0 0 0 1 1 1 4 1 0 0 0 0 2 0 0 0 0 0 14 2 1648.9737 REV__Q04721 yes yes 2 0.0024612 74.769 By matching By MS/MS 1 1 23437000 11018000 12419000 + 2743 2989 3034 6855;6856 6309 6309 7144;7145 1 KDSEEEVSLLGSQDIEEGNHQVEDGCR RSGYTLIRKDSEEEVS HQVEDGCREMACEEFN R K D C R E 0 1 1 3 1 2 6 3 1 1 2 1 0 0 0 3 0 0 0 2 0 0 27 1 3058.3422 Q9Y487 Q9Y487 693 719 ATP6V0A2 V-type proton ATPase 116 kDa subunit a isoform 2 yes yes 3 0.0003108 57.922 By MS/MS By MS/MS 1 1 26481000 13048000 13432000 2744 2916 3035 6857;6858 6310;6311 6311 6066;6067 2 KDSLESDSSTAIIPHELIR AHDRAPSRKDSLESDS IIPHELIRTRQLESVH R K D I R T 1 1 0 2 0 0 2 0 1 3 2 1 0 0 1 4 1 0 0 0 0 0 19 1 2110.0906 Q9UMX1 Q9UMX1 344 362 SUFU Suppressor of fused homolog yes yes 3 0.0029091 56.036 By MS/MS 1 4672000 4672000 0 2745 2858 3036 6859 6312 6312 5889;7099 1 KDSLSINLEFVK EPTSVTGRKDSLSINL SINLEFVKVSLSRIRR R K D V K V 0 0 1 1 0 0 1 0 0 1 2 2 0 1 0 2 0 0 0 1 0 0 12 1 1391.766 Q2LD37;H7C0Y8;H3BLT5;H0Y781 Q2LD37 4198 4209 KIAA1109 Uncharacterized protein KIAA1109 yes no 3 0.023779 48.568 By MS/MS By MS/MS 1 1 0 0 0 2746 2028 3037 6860;6861 6313;6314 6314 2 KDSLSQLEEYLR RKNSTNCRKDSLSQLE SQLEEYLRLSAVPTSM R K D L R L 0 1 0 1 0 1 2 0 0 0 3 1 0 0 0 2 0 0 1 0 0 0 12 1 1479.7569 O60303 O60303 689 700 KIAA0556 Uncharacterized protein KIAA0556 yes yes 2 0.0071993 83.087 By MS/MS By MS/MS 1 1 3713700 1906700 1807100 2747 1403 3038 6862;6863 6315;6316;6317 6317 2581 3 KDSLTQAQEQGNLLN MGVHHLHRKDSLTQAQ QEQGNLLN________ R K D L N - 1 0 2 1 0 3 1 1 0 0 3 1 0 0 0 1 1 0 0 0 0 0 15 1 1657.8271 Q5JTD0 Q5JTD0 543 557 TJAP1 Tight junction-associated protein 1 yes yes 2 0.00069196 104.24 By MS/MS By matching 1 1 97438000 51198000 46240000 2748 2076 3039 6864;6865 6318 6318 4091 1 KDSNELSDSAGEEDSADLKR RFVVKEEKKDSNELSD EDSADLKRAQKDKGLH K K D K R A 2 1 1 4 0 0 3 1 0 0 2 2 0 0 0 4 0 0 0 0 0 0 20 2 2164.972 Q9Y6X9 Q9Y6X9 771 790 MORC2 MORC family CW-type zinc finger protein 2 yes yes 3 0.0012402 68.916 By MS/MS By matching 1 1 5995400 3423700 2571700 2749 2955 3040 6866;6867 6319 6319 6138 1 KDSQNSSQHSVSSHR PKSQPLERKDSQNSSQ QHSVSSHRSLHTASPS R K D H R S 0 1 1 1 0 2 0 0 2 0 0 1 0 0 0 6 0 0 0 1 0 0 15 1 1682.7721 A0A087WXD2;H7C5T8;H7C4U7;H7C535;A0A087WT53;Q96QZ7 A0A087WXD2 432 446 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 yes no 3 0.0022564 62.378 By MS/MS By MS/MS 1 1 7344200 2811600 4532600 2750 21 3041 6868;6869 6320;6321 6320 46;47 2 KDSSSEVFSDAAK SSEDSGSRKDSSSEVF EVFSDAAKEGWLHFRP R K D A K E 2 0 0 2 0 0 1 0 0 0 0 2 0 1 0 4 0 0 0 1 0 0 13 1 1369.6361 Q5T5U3;E7ESW5;F8W9U9;A0A1B0GV73;A0A1B0GTZ9 Q5T5U3 921 933 ARHGAP21 Rho GTPase-activating protein 21 yes no 2 8.094E-13 116.79 By matching By MS/MS 1 1 15642000 8027400 7614200 2751 2098 3042 6870;6871 6322 6322 4149 0 KDSSSVVEWTQAPK SSSILYARKDSSSVVE VEWTQAPKERGHRGSE R K D P K E 1 0 0 1 0 1 1 0 0 0 0 2 0 0 1 3 1 1 0 2 0 0 14 1 1560.7784 Q8TC07;F8WCB5 Q8TC07 68 81 TBC1D15 TBC1 domain family member 15 yes no 3 0.0026929 63.46 By MS/MS By MS/MS 1 1 3569600 1711700 1857900 2752 2375 3043 6872;6873 6323;6324 6323 4754;4755 2 KDYDTLSK IERSNVVRKDYDTLSK KDYDTLSKCSPKMPPA R K D S K C 0 0 0 2 0 0 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 8 1 968.48148 Q9UHR4 Q9UHR4 272 279 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 3.9969E-70 219.25 By MS/MS By MS/MS 2 2 22261000 10153000 12108000 2753 2816 3044 6874;6875;6876;6877 6325;6326;6327;6328;6329;6330 6327 7086;7932 5 KEDGFEDGVEDNKLK VLGNKVERKEDGFEDG GVEDNKLKENMERACL R K E L K E 0 0 1 3 0 0 3 2 0 0 1 3 0 1 0 0 0 0 0 1 0 0 15 2 1721.8108 Q14191 Q14191 370 384 WRN Werner syndrome ATP-dependent helicase yes yes 2 0.013269 61.353 By MS/MS 1 0 0 0 2754 1943 3045 6878 6331 6331 1 KEDLVFIFWAPESAPLK TYETKESKKEDLVFIF APESAPLKSKMIYASS K K E L K S 2 0 0 1 0 0 2 0 0 1 2 2 0 2 2 1 0 1 0 1 0 0 17 1 1989.0612 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;Q9Y281 P23528 96 112 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 3 0.003808 54.764 By matching By MS/MS 1 1 6739800 3543800 3196100 2755 1625 3046 6879;6880 6332 6332 1 KEEADYSAFGTDTLIK LLRIFIQKKEEADYSA FGTDTLIKKKNVLTNV K K E I K K 2 0 0 2 0 0 2 1 0 1 1 2 0 1 0 1 2 0 1 0 0 0 16 1 1786.8625 Q9BYG5 Q9BYG5 96 111 PARD6B Partitioning defective 6 homolog beta yes yes 2 0.0093232 65.805 By MS/MS By matching 1 1 8651800 4750800 3901000 2756 2605 3047 6881;6882 6333 6333 5276;7877 1 KEEENADSDDEGELQDLLSQDWR LTIKELQKKEEENADS DLLSQDWRVKGALL__ K K E W R V 1 1 1 5 0 2 5 1 0 0 3 1 0 0 0 2 0 1 0 0 0 0 23 1 2720.1685 J3QQQ3;Q96NB3 J3QQQ3 78 100 ZNF830 Zinc finger protein 830 yes no 3 4.7382E-14 101 By MS/MS By matching 1 1 43131000 26012000 17119000 2757 1252 3048 6883;6884 6334 6334 2267 1 KEEPSQNDISPK PKSKKAKKKEEPSQND SQNDISPKTKSLRKKK K K E P K T 0 0 1 1 0 1 2 0 0 1 0 2 0 0 2 2 0 0 0 0 0 0 12 1 1370.6678 Q9NR30 Q9NR30 80 91 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.0016492 105.46 By MS/MS 1 9241900 9241900 0 2758 2716 3049 6885 6335 6335 5543 1 KEESEESDDDMGFGLFD AEEKKDEKKEESEESD DMGFGLFD________ K K E F D - 0 0 0 4 0 0 4 2 0 0 1 1 1 2 0 2 0 0 0 0 0 0 17 1 1948.752 H0YDD8;P05386;P05387 H0YDD8 76 92 RPLP2;RPLP1 60S acidic ribosomal protein P1;60S acidic ribosomal protein P2 yes no 2 5.6106E-26 155.63 By MS/MS By MS/MS 1 1 69754000 29562000 40192000 2759 1062 3050 6886;6887 6336;6337 6337 1967 2 KEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK KYRELLAKKEGITGPP GSPTAAGKKTEKEEST K K E G K K 5 0 0 5 1 0 1 5 0 3 1 3 0 1 5 5 3 0 0 0 0 0 38 2 3729.768 E9PDE4;E7ES10;E7EVY3;B7Z574;A0A0C4DGB5;P20810;H0YA91 E9PDE4 140 177 CAST Calpastatin yes no 4 0.00096178 47.195 By matching By MS/MS 1 1 8927100 3176700 5750500 2760 288 3051 6888;6889 6338 6338 513 1 KEIPASPSR PGAAEKPKKEIPASPS EIPASPSRTKIPAEKE K K E S R T 1 1 0 0 0 0 1 0 0 1 0 1 0 0 2 2 0 0 0 0 0 0 9 1 983.53999 Q9NYZ3 Q9NYZ3 238 246 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.0029396 99.343 By MS/MS 1 0 0 0 2761 2762 3052 6890 6339 6339 5668;5669 1 KEKPELSEPSHLNGPSSDPEAAFLSR VLPAVIPKKEKPELSE PEAAFLSRDVDDGSGS K K E S R D 2 1 1 1 0 0 4 1 1 0 3 2 0 1 4 5 0 0 0 0 0 0 26 2 2821.3883 F5GWT4;Q9H4A3 F5GWT4 1748 1773 WNK1 Serine/threonine-protein kinase WNK1 yes no 4 0.00097753 53.589 By MS/MS By MS/MS 1 1 20845000 8921200 11923000 2762 859 3053 6891;6892 6340;6341 6341 1546;1547 2 KELSPAGSISK AKKLKRMKKELSPAGS SPAGSISKNSPATLFE K K E S K N 1 0 0 0 0 0 1 1 0 1 1 2 0 0 1 3 0 0 0 0 0 0 11 1 1115.6186 O95453 O95453 616 626 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.0027879 99.669 By matching By MS/MS 1 1 25429000 12384000 13045000 2763 1490 3054 6893;6894 6342 6342 2761 1 KENPSPLFSIK PVDDKEQRKENPSPLF PSPLFSIKKTKQLRSE R K E I K K 0 0 1 0 0 0 1 0 0 1 1 2 0 1 2 2 0 0 0 0 0 0 11 1 1258.6921 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 810 820 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 1.7327E-05 135.81 By MS/MS By matching 1 1 6112600 3537700 2574900 2764 329 3055 6895;6896 6343 6343 615 1 KESIIKSEGELLER EKPSLPPRKESIIKSE SEGELLERERERQRTE R K E E R E 0 1 0 0 0 0 4 1 0 2 2 2 0 0 0 2 0 0 0 0 0 0 14 2 1629.8938 A1X283 A1X283 526 539 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 3 0.0024978 73.76 By MS/MS By MS/MS 1 1 4873400 2041300 2832200 2765 392 3056 6897;6898 6344;6345 6344 751 2 KESKGPIVPLNVADQK TATQPLLKKESKGPIV PLNVADQKLLEASTQF K K E Q K L 1 0 1 1 0 1 1 1 0 1 1 3 0 0 2 1 0 0 0 2 0 0 16 2 1721.9676 G3XAL9;P55011 G3XAL9 992 1007 SLC12A2 Solute carrier family 12 member 2 yes no 3 0.0031003 65.716 By MS/MS By MS/MS 1 1 30715000 15584000 15131000 2766 985 3057 6899;6900 6346;6347 6346 1794 2 KESYSIYVYK GKKRKRSRKESYSIYV SYSIYVYKVLKQVHPD R K E Y K V 0 0 0 0 0 0 1 0 0 1 0 2 0 0 0 2 0 0 3 1 0 0 10 1 1278.6496 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 35 44 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C yes no 2 0.0048006 90.793 By MS/MS By matching 1 1 4815100 2382000 2433100 2767 1534 3058 6901;6902 6348 6348 2823;2824 1 KETESEAEDNLDDLEK PVAAPEPKKETESEAE DNLDDLEKHLREKALR K K E E K H 1 0 1 3 0 0 5 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 16 1 1863.8222 A9Z1X7;Q8IYB3 A9Z1X7 879 894 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 6.9924E-190 246.32 By MS/MS By MS/MS 6 6 484680000 283990000 200690000 2768 442 3059;3060 6903;6904;6905;6906;6907;6908;6909;6910;6911;6912;6913;6914 6349;6350;6351;6352;6353;6354;6355;6356;6357;6358;6359;6360 6351 837;6335 12 KETESEAEDNLDDLEKHLR PVAAPEPKKETESEAE DDLEKHLREKALRSMR K K E L R E 1 1 1 3 0 0 5 0 1 0 3 2 0 0 0 1 1 0 0 0 0 0 19 2 2270.0662 A9Z1X7;Q8IYB3 A9Z1X7 879 897 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3;4 3.3398E-33 155.2 By MS/MS By MS/MS 4 4 92306000 39259000 53047000 2769 442 3061;3062 6915;6916;6917;6918;6919;6920;6921;6922 6361;6362;6363;6364;6365;6366;6367;6368 6364 837;6335 7 KETPPPLVPPAAR ________________ PLVPPAAREWNLPPNA R K E A R E 2 1 0 0 0 0 1 0 0 0 1 1 0 0 5 0 1 0 0 1 0 0 13 1 1371.7874 Q9BQA1 Q9BQA1 3 15 WDR77 Methylosome protein 50 yes yes 2;3 2.9743E-06 121.18 By MS/MS By MS/MS 2 2 116920000 64368000 52547000 2770 2569 3063 6923;6924;6925;6926 6369;6370;6371;6372;6373 6373 7025 5 KETQSPEQVK NSERITVKKETQSPEQ TQSPEQVKSEKLKDLF K K E V K S 0 0 0 0 0 2 2 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 1 1172.6037 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 492 501 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 3.321E-20 174.72 By MS/MS By MS/MS 1 1 124730000 71214000 53516000 2771 2759 3064 6927;6928 6374;6375 6375 5645 2 KEVSPEVVR KREEIIIKKEVSPEVV EVSPEVVRSKLSPSPS K K E V R S 0 1 0 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 9 1 1041.5819 Q5T200;A0A087WX14 Q5T200 195 203 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2;3 0.0039016 134.18 By MS/MS By MS/MS 2 2 49872000 20300000 29571000 2772 2094 3065 6929;6930;6931;6932 6376;6377;6378;6379 6378 4131 4 KFDGVEGPRTPK FDYQFGYRKFDGVEGP VEGPRTPKYMNNITYY R K F P K Y 0 1 0 1 0 0 1 2 0 0 0 2 0 1 2 0 1 0 0 1 0 0 12 2 1329.7041 Q6PKG0;A0A0B4J210;E5RH50;H0YBW1;H0YAN4 Q6PKG0 367 378 LARP1 La-related protein 1 yes no 2;3 0.00583 95.195 By MS/MS By MS/MS 2 2 33083000 15152000 17930000 2773 2162 3066 6933;6934;6935;6936 6380;6381;6382;6383 6381 6908 4 KFGDPVVQSDMK DAKRLIGRKFGDPVVQ PVVQSDMKHWPFQVIN R K F M K H 0 0 0 2 0 1 0 1 0 0 0 2 1 1 1 1 0 0 0 2 0 0 12 1 1349.6649 A0A0G2JIW1;P0DMV9;P0DMV8 A0A0G2JIW1 78 89 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 0.0057245 64.827 By MS/MS 1 0 0 0 2774 320 3067 6937 6384 6384 1 KFLDTSHYSTAGSSSVR VTNLPTPRKFLDTSHY TAGSSSVREINLQDIK R K F V R E 1 1 0 1 0 0 0 1 1 0 1 1 0 1 0 5 2 0 1 1 0 0 17 1 1841.8908 Q96A65 Q96A65 240 256 EXOC4 Exocyst complex component 4 yes yes 3 0.0017825 64.476 By MS/MS By MS/MS 1 1 18504000 8399700 10104000 2775 2455 3068 6938;6939 6385;6386 6385 6993;7832 2 KFPDRLAEDEGDSEPEAVGQSR PYVRRKRKKFPDRLAE PEAVGQSRGRRQKK__ K K F S R G 2 2 0 3 0 1 4 2 0 0 1 1 0 1 2 2 0 0 0 1 0 0 22 2 2431.1252 Q9UIG0 Q9UIG0 1456 1477 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 3;4 0.0023773 57.803 By MS/MS By MS/MS 1 2 137010000 79754000 57260000 2776 2817 3069 6940;6941;6942 6387;6388;6389;6390 6390 5789 4 KFQEQECPPSPEPTRK HELVRVIRKFQEQECP PSPEPTRKEKDKKGCH R K F R K E 0 1 0 0 1 2 3 0 0 0 0 2 0 1 4 1 1 0 0 0 0 0 16 2 1956.9364 P62070 P62070 177 192 RRAS2 Ras-related protein R-Ras2 yes yes 3;4 0.00044955 82.189 By MS/MS By MS/MS 2 2 50111000 27980000 22132000 2777 1789 3070 6943;6944;6945;6946 6391;6392;6393 6393 3367 2 KFQTGTR CETQTKLKKFQTGTRT KKFQTGTRTKKSSKKK K K F T R T 0 1 0 0 0 1 0 1 0 0 0 1 0 1 0 0 2 0 0 0 0 0 7 1 836.45045 Q9P266 Q9P266 560 566 KIAA1462 Junctional protein associated with coronary artery disease yes yes 2 0.022982 67.494 By MS/MS 1 0 0 0 2778 2784 3071 6947 6394 6394 1 KFSAGGDSDPPLKR LTERLGKRKFSAGGDS DSDPPLKRSLAQRLGK R K F K R S 1 1 0 2 0 0 0 2 0 0 1 2 0 1 2 2 0 0 0 0 0 0 14 2 1473.7576 O75152;E9PBY7;E9PQ61 O75152 288 301 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 0.00086633 88.282 By MS/MS By MS/MS 1 1 48885000 26688000 22197000 2779 1431 3072 6948;6949 6395;6396 6396 2638 2 KFSGFSAKPNNSGEAPSSPTPK FVTSTNPRKFSGFSAK APSSPTPKRSLSSSKC R K F P K R 2 0 2 0 0 0 1 2 0 0 0 3 0 2 4 5 1 0 0 0 0 0 22 2 2234.0968 P49916;K7ENR9;K7ERZ5 P49916 225 246 LIG3 DNA ligase 3 yes no 3 2.0677E-05 77.221 By MS/MS By matching 1 1 47301000 27207000 20094000 2780 1735 3073 6950;6951 6397 6397 3283;3284 1 KFSKEEPVSSGPEEAVGK RSGSKKKRKFSKEEPV GPEEAVGKSSSKKKKK R K F G K S 1 0 0 0 0 0 4 2 0 0 0 3 0 1 2 3 0 0 0 2 0 0 18 2 1903.9527 O00567 O00567 561 578 NOP56 Nucleolar protein 56 yes yes 2;3 8.2749E-05 82.406 By MS/MS By MS/MS 4 4 136450000 81378000 55075000 2781 1338 3074;3075;3076 6952;6953;6954;6955;6956;6957;6958;6959 6398;6399;6400;6401;6402;6403 6398 2413;2414;2415 6 KFSLDELAGPGAEGPSNLK NKELRTKRKFSLDELA AEGPSNLKSKINKVSC R K F L K S 2 0 1 1 0 0 2 3 0 0 3 2 0 1 2 2 0 0 0 0 0 0 19 1 1928.9844 C9J858;O76064 C9J858 98 116 RNF8 E3 ubiquitin-protein ligase RNF8 yes no 2;3 7.7841E-29 146.68 By MS/MS By MS/MS 2 1 24283000 13541000 10743000 2782 569 3077 6960;6961;6962 6404;6405 6405 1048 2 KFSPDLK ARHAPAVRKFSPDLKL RKFSPDLKLLKDVKIS R K F L K L 0 0 0 1 0 0 0 0 0 0 1 2 0 1 1 1 0 0 0 0 0 0 7 1 833.4647 Q8WYQ5;C9JSD5 Q8WYQ5 107 113 DGCR8 Microprocessor complex subunit DGCR8 yes no 2 0.021876 77.533 By MS/MS 1 0 0 0 2783 2418 3078 6963 6406 6406 1 KGAAPTPPGK APAKESPRKGAAPTPP AAPTPPGKTGPSAAQA R K G G K T 2 0 0 0 0 0 0 2 0 0 0 2 0 0 3 0 1 0 0 0 0 0 10 1 922.52362 Q13428;J3KQ96;E7ETY2;H0YAB7 Q13428 909 918 TCOF1 Treacle protein yes no 2 0.016846 86.262 By matching By MS/MS 1 1 11916000 5251100 6665400 2784 1915 3079 6964;6965 6407 6407 1 KGAGDGSDEEVDGK VVPRRMARKGAGDGSD SDEEVDGKADGAEAKP R K G G K A 1 0 0 3 0 0 2 4 0 0 0 2 0 0 0 1 0 0 0 1 0 0 14 1 1362.5899 P35579 P35579 1937 1950 MYH9 Myosin-9 yes yes 2 0.0020881 91.592 By MS/MS By MS/MS 2 2 19640000 9489000 10151000 2785 1670 3080 6966;6967;6968;6969 6408;6409;6410;6411 6411 3075 3 KGAILSEEELAAMSPTAAAVAK DLLSATKRKGAILSEE PTAAAVAKIVKPGMKL R K G A K I 7 0 0 0 0 0 3 1 0 1 2 2 1 0 1 2 1 0 0 1 0 0 22 1 2157.1351 P12270 P12270 366 387 TPR Nucleoprotein TPR yes yes 3 2.6857E-05 75.703 By MS/MS 1 4992100 0 4992100 2786 1570 3081 6970 6412 6412 2885 1 KGDEVDGVDEVAK GVKSEGKRKGDEVDGV DGVDEVAKKKSKKEKD R K G A K K 1 0 0 3 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 3 0 0 13 1 1359.6518 P09874 P09874 209 221 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.029705 47.606 By MS/MS 1 0 0 0 2787 1550 3082 6971 6413 6413 1 KGDRSPEPGQTWTR TVGLKLHRKGDRSPEP EPGQTWTREVFSSCSS R K G T R E 0 2 0 1 0 1 1 2 0 0 0 1 0 0 2 1 2 1 0 0 0 0 14 2 1613.791 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4 Q09666 89 102 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 3 0.028642 49.708 By MS/MS By matching 1 1 6895800 3602400 3293400 2788 1871 3083 6972;6973 6414 6414 1 KGGEFDEFVNDDTDDDLPISK GGGGRRSKKGGEFDEF DDDLPISKKKKRRKGS K K G S K K 0 0 1 6 0 0 2 2 0 1 1 2 0 2 1 1 1 0 0 1 0 0 21 1 2355.039 Q6PD62 Q6PD62 913 933 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 2;3 1.4595E-08 99.238 By MS/MS By MS/MS 2 2 178480000 91316000 87163000 2789 2159 3084 6974;6975;6976;6977 6415;6416;6417;6418 6417 6906 4 KGGEFDEFVNDDTDDDLPISKK GGGGRRSKKGGEFDEF DDLPISKKKKRRKGSG K K G K K K 0 0 1 6 0 0 2 2 0 1 1 3 0 2 1 1 1 0 0 1 0 0 22 2 2483.134 Q6PD62 Q6PD62 913 934 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 4 0.0046518 49.662 By MS/MS 1 3052900 3052900 0 2790 2159 3085 6978 6419 6419 6906 1 KGGSYSQAASSDSAQGSDVSLTACKV WRRKSSDRKGGSYSQA VSLTACKV________ R K G K V - 4 0 0 2 1 2 0 3 0 0 1 2 0 0 0 7 1 0 1 2 0 0 26 2 2560.1711 A0A140T9I0;A0A140T9X5;A0A140T913;Q09160;P30447;P10316;P05534;P01892;P01891 A0A140T9I0 340 365 HLA-A HLA class I histocompatibility antigen, A-80 alpha chain;HLA class I histocompatibility antigen, A-23 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-24 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain yes no 3 0.0027881 54.904 By MS/MS By matching 1 1 12834000 6282700 6550800 2791 359 3086 6979;6980 6420 6420 665;666 1 KGLNVIGASDQSPLQSPSNLR QACLREKKKGLNVIGA LQSPSNLRDNPFRTTQ K K G L R D 1 1 2 1 0 2 0 2 0 1 3 1 0 0 2 4 0 0 0 1 0 0 21 1 2180.1549 B4DJX4;Q9HAU0;A0JP02;H0YGJ6 B4DJX4 877 897 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes no 3 0.001779 56.719 By matching By MS/MS 1 1 7609800 4432200 3177600 2792 483 3087 6981;6982 6421 6421 913;914 1 KGLPLGSAVSSPVLFSPVGR STPRTASRKGLPLGSA VLFSPVGRRSSLSSRG R K G G R R 1 1 0 0 0 0 0 3 0 0 3 1 0 1 3 4 0 0 0 3 0 0 20 1 1967.1204 Q8WUM0 Q8WUM0 35 54 NUP133 Nuclear pore complex protein Nup133 yes yes 2;3 1.2762E-34 140.07 By MS/MS By MS/MS 4 4 41781000 23584000 18197000 2793 2401 3088;3089 6983;6984;6985;6986;6987;6988;6989;6990 6422;6423;6424;6425;6426;6427;6428 6424 4802;4803;4804 7 KGNSPNSEPPTPK RPPEADGKKGNSPNSE NSEPPTPKTAWAETSR K K G P K T 0 0 2 0 0 0 1 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 13 1 1351.6732 P48634 P48634 377 389 PRRC2A Protein PRRC2A yes yes 2 0.0043616 88.596 By MS/MS By MS/MS 1 2 13539000 5374100 8164500 2794 1718 3090 6991;6992;6993 6429;6430;6431 6429 3207;3208 3 KGPDEAEESQYDSGIESLR ________________ DSGIESLRSLRSLPES R K G L R S 1 1 0 2 0 1 4 2 0 1 1 1 0 0 1 3 0 0 1 0 0 0 19 1 2108.9498 H3BNC2;Q7LC14;O00221 H3BNC2 6 24 NFKBIE NF-kappa-B inhibitor epsilon yes no 3 0.00044923 69.361 By MS/MS By MS/MS 1 1 7906200 5720800 2185300 2795 1117 3091 6994;6995 6432;6433;6434 6433 7460 3 KGPGQPSSPQR ARGGGKGRKGPGQPSS GQPSSPQRLDRLSGLA R K G Q R L 0 1 0 0 0 2 0 2 0 0 0 1 0 0 3 2 0 0 0 0 0 0 11 1 1137.5891 O95400 O95400 188 198 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 2;3 0.00018784 113.07 By MS/MS By MS/MS 2 2 10446000 4418900 6027100 2796 1488 3092 6996;6997;6998;6999 6435;6436;6437 6437 2756;2757 3 KGPGQPSSPQRLDR ARGGGKGRKGPGQPSS SSPQRLDRLSGLADQM R K G D R L 0 2 0 1 0 2 0 2 0 0 1 1 0 0 3 2 0 0 0 0 0 0 14 2 1521.8012 O95400 O95400 188 201 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 3 0.0071223 63.181 By MS/MS By matching 1 1 87569000 47360000 40209000 2797 1488 3093 7000;7001 6438 6438 2756;2757 1 KGSDDAPYSPTAR FKSRSKKRKGSDDAPY APYSPTARVGPSVPRQ R K G A R V 2 1 0 2 0 0 0 1 0 0 0 1 0 0 2 2 1 0 1 0 0 0 13 1 1363.6368 O75151;E7ET14;A0A087WW48 O75151 897 909 PHF2 Lysine-specific demethylase PHF2 yes no 2 0.0008421 110.22 By MS/MS By MS/MS 2 2 30718000 14487000 16231000 2798 1430 3094;3095 7002;7003;7004;7005 6439;6440;6441;6442;6443 6440 2635;2636 5 KGSFSALVGR ________________ SFSALVGRTNGLTKPA R K G G R T 1 1 0 0 0 0 0 2 0 0 1 1 0 1 0 2 0 0 0 1 0 0 10 1 1020.5716 A0A087WWN2;Q13619 A0A087WWN2 8 17 CUL4A Cullin-4A yes no 2 0.0055649 87.641 By MS/MS By MS/MS 1 1 11773000 6730900 5042300 2799 79 3096 7006;7007 6444;6445 6445 143 2 KGSITEYTAAEEK PKTTEVIRKGSITEYT EYTAAEEKEDGRRWRM R K G E K E 2 0 0 0 0 0 3 1 0 1 0 2 0 0 0 1 2 0 1 0 0 0 13 1 1425.6987 J3KN59;Q12982 J3KN59 233 245 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 yes no 2 4.023E-10 135.09 By MS/MS By MS/MS 1 1 15718000 7517500 8200000 2800 1222 3097 7008;7009 6446;6447;6448 6447 2214 3 KGSKVGDFGDAINWPTPGEIAHK RAAVPKQRKGSKVGDF TPGEIAHKSVQPQSHK R K G H K S 2 0 1 2 0 0 1 4 1 2 0 3 0 1 2 1 1 1 0 1 0 0 23 2 2423.2234 Q6PKG0;A0A0B4J210;H0YAX9 Q6PKG0 163 185 LARP1 La-related protein 1 yes no 4 0.0017673 53.209 By MS/MS By matching 1 1 5517000 1909000 3608000 2801 2162 3098 7010;7011 6449;6450 6449 4305 2 KGSLADVVDTLK ALGTPERRKGSLADVV ADVVDTLKQRKMEELI R K G L K Q 1 0 0 2 0 0 0 1 0 0 2 2 0 0 0 1 1 0 0 2 0 0 12 1 1244.6976 I3L0A5;F5H0I3;P35711;G3V0H1;E9PN02;F5GWL1;E9PQL4;E9PQ78;F5H876;P35712 I3L0A5 126 137 SOX5;SOX6 Transcription factor SOX-5;Transcription factor SOX-6 no no 2 0.0075293 82.069 By MS/MS 1 1074500 1074500 0 2802 872;1675 3099 7012 6451 6451 1568 1 KGSLLPTSPR PLLSELLKKGSLLPTS SLLPTSPRLVNESEMA K K G P R L 0 1 0 0 0 0 0 1 0 0 2 1 0 0 2 2 1 0 0 0 0 0 10 1 1054.6135 H7C128;H7C179;H7C127 H7C128 268 277 BRD8 yes no 2 0.0035212 101.72 By MS/MS By MS/MS 1 1 24070000 12782000 11288000 2803 1165 3100 7013;7014 6452;6453 6452 2116 2 KGSPCDTLASSTEKR ANPDSHKRKGSPCDTL LASSTEKRRREQENKY R K G K R R 1 1 0 1 1 0 1 1 0 0 1 2 0 0 1 3 2 0 0 0 0 0 15 2 1635.7886 Q15788 Q15788 20 34 NCOA1 Nuclear receptor coactivator 1 yes yes 3 0.0015662 74.783 By MS/MS By matching 1 1 4626200 2428300 2198000 2804 2012 3101 7015;7016 6454 6454 3921 1 KGSPTPGFSTR PTSAYPERKGSPTPGF PTPGFSTRRGSPTTGF R K G T R R 0 1 0 0 0 0 0 2 0 0 0 1 0 1 2 2 2 0 0 0 0 0 11 1 1133.5829 J3KPS2;Q6ZRV2 J3KPS2 606 616 FAM83H Protein FAM83H yes no 2 0.0021044 103.11 By MS/MS By MS/MS 1 1 12556000 6813300 5742600 2805 1231 3102 7017;7018 6455;6456 6456 2228 2 KGSPVSEIGWETPPPESPR REATPYVKKGSPVSEI TPPPESPRLGGSTSDP K K G P R L 0 1 0 0 0 0 3 2 0 1 0 1 0 0 5 3 1 1 0 1 0 0 19 1 2049.0167 Q13884 Q13884 203 221 SNTB1 Beta-1-syntrophin yes yes 3 0.0019245 58.693 By MS/MS By MS/MS 1 1 4589100 2938400 1650700 2806 1934 3103 7019;7020 6457;6458 6458 3732 2 KGSSGNASEVSVACLTER IPSIERSRKGSSGNAS SVACLTERIHQMEENQ R K G E R I 2 1 1 0 1 0 2 2 0 0 1 1 0 0 0 4 1 0 0 2 0 0 18 1 1850.8792 Q69YQ0;F8WAN1;C9J8U1 Q69YQ0 382 399 SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 3 1.7081E-06 99.413 By MS/MS By MS/MS 1 1 16687000 9688600 6998800 2807 2137 3104 7021;7022 6459;6460 6459 4248;4249;4250 2 KGSSSSVCSVASSSDISLGSTK AAAGSSSRKGSSSSVC DISLGSTKTERRSEIV R K G T K T 1 0 0 1 1 0 0 2 0 1 1 2 0 0 0 10 1 0 0 2 0 0 22 1 2130.011 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 1386 1407 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes no 3 0.016349 40.044 By MS/MS By matching 1 1 10725000 5418500 5306500 2808 150 3105 7023;7024 6461 6461 261 1 KGSVSHDTVQPR PPGRGQVKKGSVSHDT SHDTVQPRTSADAQEP K K G P R T 0 1 0 1 0 1 0 1 1 0 0 1 0 0 1 2 1 0 0 2 0 0 12 1 1309.6739 E9PMG1;H0YDT0;Q96D71;F2Z3L2 E9PMG1 141 152 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 2 0.0049162 89.9 By MS/MS By matching 1 1 10438000 6304300 4133600 2809 828 3106 7025;7026 6462 6462 1477 1 KGTENGVNGTLTSNVADSPR VTKGRSSKKGTENGVN SNVADSPRNKKEKSS_ K K G P R N 1 1 3 1 0 0 1 3 0 0 1 1 0 0 1 2 3 0 0 2 0 0 20 1 2015.9872 G3XAN4;Q15629 G3XAN4 262 281 TRAM1 Translocating chain-associated membrane protein 1 yes no 3 0.0037646 56.529 By MS/MS By matching 1 1 5778200 3170700 2607500 2810 987 3107 7027;7028 6463 6463 1799 1 KGTGLLSSDYR TPEAVTTRKGTGLLSS GLLSSDYRIINGKSGT R K G Y R I 0 1 0 1 0 0 0 2 0 0 2 1 0 0 0 2 1 0 1 0 0 0 11 1 1195.6197 C9J6P4;Q7Z2W4 C9J6P4 401 411 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0030019 98.592 By MS/MS By MS/MS 1 1 8921900 4743300 4178600 2811 565 3108 7029;7030 6464;6465 6465 1039;7315 2 KGVLGKSPLSALAR QHQKALPKKGVLGKSP SPLSALARKKARLSLV K K G A R K 2 1 0 0 0 0 0 2 0 0 3 2 0 0 1 2 0 0 0 1 0 0 14 2 1395.8562 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 1284 1297 MYBBP1A Myb-binding protein 1A yes no 3 0.010982 58.712 By MS/MS By MS/MS 1 1 4959100 2034700 2924400 2812 2570 3109 7031;7032 6466;6467 6467 5187 2 KGVSASAVPFTPSSPLLSCSQEGSR PAGLYRIRKGVSASAV SCSQEGSRHTSKLSRH R K G S R H 2 1 0 0 1 1 1 2 0 0 2 1 0 1 3 7 1 0 0 2 0 0 25 1 2548.2592 J3QRU8;Q9Y2X7;J3QL89 J3QRU8 558 582 GIT1 ARF GTPase-activating protein GIT1 yes no 3 0.010861 41.846 By MS/MS By MS/MS 1 1 11888000 6039900 5848400 2813 1258 3110 7033;7034 6468;6469 6468 2275;2276;2277 2 KHSDPHLLER RSFADIGKKHSDPHLL SDPHLLERNGILASPQ K K H E R N 0 1 0 1 0 0 1 0 2 0 2 1 0 0 1 1 0 0 0 0 0 0 10 1 1230.6469 C9JRP1;Q9Y6M7 C9JRP1 240 249 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 yes no 3 0.011525 54.871 By MS/MS 1 1191500 0 1191500 2814 606 3111 7035 6470 6470 1107 1 KHSEEAEFTPPLKCSPK HKKKKKKRKHSEEAEF PPLKCSPKRKGKSNFL R K H P K R 1 0 0 0 1 0 3 0 1 0 1 3 0 1 3 2 1 0 0 0 0 0 17 2 1983.9724 Q3B726 Q3B726 314 330 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 3 0.00020121 82.267 By MS/MS By MS/MS 1 1 17704000 10957000 6747200 2815 2035 3112 7036;7037 6471;6472;6473 6473 3977;3978 3 KHSPSPPPPTPTESR ASANARKRKHSPSPPP PPTPTESRKKSGKKGQ R K H S R K 0 1 0 0 0 0 1 0 1 0 0 1 0 0 6 3 2 0 0 0 0 0 15 1 1613.8162 Q92922 Q92922 326 340 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2;3 3.1377E-21 144.33 By MS/MS By MS/MS 3 3 107680000 55533000 52146000 2816 2448 3113;3114 7038;7039;7040;7041;7042;7043 6474;6475;6476;6477;6478;6479;6480;6481;6482;6483;6484 6479 4925;4926 11 KHSQTDLVSR KQPPPLMKKHSQTDLV SQTDLVSRLKTRKILG K K H S R L 0 1 0 1 0 1 0 0 1 0 1 1 0 0 0 2 1 0 0 1 0 0 10 1 1169.6153 E9PN66;E9PNB3;E9PKN9;E9PS55;E9PMY0;E9PMW4;E9PQ46;E9PIN5;E9PIK4;U3KQ32;E9PKZ4;E9PPM1;O14683 E9PN66 12 21 TP53I11 Tumor protein p53-inducible protein 11 yes no 3 0.0004823 104.81 By MS/MS By MS/MS 2 2 22141000 10360000 11782000 2817 801 3115 7044;7045;7046;7047 6485;6486;6487;6488;6489 6486 1436;6443 5 KIDAGTMAEPSASPSKR VPEQHRKRKIDAGTMA PSASPSKRRDSGDNSA R K I K R R 3 1 0 1 0 0 1 1 0 1 0 2 1 0 2 3 1 0 0 0 0 0 17 2 1744.8778 Q8IXQ3 Q8IXQ3 57 73 C9orf40 Uncharacterized protein C9orf40 yes yes 3 0.014913 51.469 By MS/MS By matching 1 1 5459900 2930800 2529100 2818 2279 3116 7048;7049 6490 6490 4577 1 KIDTHPSPSHSSTVK PEREQKRRKIDTHPSP PSHSSTVKDSLIELKE R K I V K D 0 0 0 1 0 0 0 0 2 1 0 2 0 0 2 4 2 0 0 1 0 0 15 1 1619.8267 A0A0C4DG98;Q8NI27;H0Y594;H0Y7U4;H7C477 A0A0C4DG98 1296 1310 THOC2 THO complex subunit 2 yes no 3 0.00068266 72.209 By MS/MS 1 11796000 0 11796000 2819 287 3117 7050 6491 6491 509;510;511 1 KIDTHPSPSHSSTVKDSLIELK PEREQKRRKIDTHPSP KDSLIELKESSAKLYI R K I L K E 0 0 0 2 0 0 1 0 2 2 2 3 0 0 2 5 2 0 0 1 0 0 22 2 2418.2755 A0A0C4DG98;Q8NI27;H0Y594 A0A0C4DG98 1296 1317 THOC2 THO complex subunit 2 yes no 4 0.003384 49.592 By MS/MS By MS/MS 1 1 12561000 4722500 7838700 2820 287 3118 7051;7052 6492;6493 6492 509;510;511 2 KIKGSSPGIQDTLEAEDGAFETDEAPEDR DPEEPDPKKIKGSSPG TDEAPEDRILSCRKAG K K I D R I 3 1 0 4 0 1 5 3 0 2 1 2 0 1 2 2 2 0 0 0 0 0 29 2 3104.4422 Q9UNX4 Q9UNX4 236 264 WDR3 WD repeat-containing protein 3 yes yes 3 0.0030077 50.47 By MS/MS By MS/MS 1 1 19653000 10419000 9234300 2821 2865 3119 7053;7054 6494;6495 6494 5903;5904 2 KIPDPDSDDVSEVDAR TLPVEEKKKIPDPDSD DVSEVDARHIIENAKQ K K I A R H 1 1 0 5 0 0 1 0 0 1 0 1 0 0 2 2 0 0 0 2 0 0 16 1 1756.8115 Q9HBD4;A0A0A0MT49;P51532 Q9HBD4 689 704 SMARCA4 Transcription activator BRG1 yes no 2;3 0.00038427 94.845 By MS/MS By MS/MS 2 2 29237000 17320000 11917000 2822 237 3120 7055;7056;7057;7058 6496;6497;6498;6499 6496 427 4 KIPEPSPVTR RQSSLSEKKIPEPSPV PEPSPVTRRKAYEKAE K K I T R R 0 1 0 0 0 0 1 0 0 1 0 1 0 0 3 1 1 0 0 1 0 0 10 1 1122.6397 H0YHT2;A0A1B0GV47;Q7Z4S6;H0YI78 H0YHT2 582 591 KIF21A Kinesin-like protein KIF21A yes no 3 0.0039731 71.933 By MS/MS 1 0 0 0 2823 375 3121 7059 6500 6500 706 1 KISLEDIQAFEK AYWRLLFKKISLEDIQ EDIQAFEKTYKGSEEE K K I E K T 1 0 0 1 0 1 2 0 0 2 1 2 0 1 0 1 0 0 0 0 0 0 12 1 1419.7609 Q8WXX5 Q8WXX5 107 118 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 2 0.0076751 81.619 By matching By MS/MS 1 1 8638200 4284400 4353800 2824 2414 3122 7060;7061 6501 6501 4844 1 KISPPSYAR REKRLRGRKISPPSYA ISPPSYARRDSPTYDP R K I A R R 1 1 0 0 0 0 0 0 0 1 0 1 0 0 2 2 0 0 1 0 0 0 9 1 1017.5607 F5H0Q6;A0A0A0MQS2;Q8N2M8 F5H0Q6 283 291 CLASRP CLK4-associating serine/arginine rich protein yes no 2 0.011773 84.821 By MS/MS By MS/MS 1 1 17460000 6910000 10550000 2825 161 3123 7062;7063 6502;6503 6503 292 2 KISVVSTK SLPKSFKRKISVVSTK KISVVSTKGVPAGNSD R K I T K G 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 2 1 0 0 2 0 0 8 1 860.53312 G3V3B0 G3V3B0 65 72 ACIN1 yes yes 2 0.0263 84.687 By MS/MS By MS/MS 1 1 9006000 4462600 4543500 2826 968 3124 7064;7065 6504;6505 6505 2 KITIADCGQLE SRNGKTSKKITIADCG IADCGQLE________ K K I L E - 1 0 0 1 1 1 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1246.6227 P62937 P62937 155 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 5.4252E-14 187.5 By MS/MS By MS/MS 1 1 67488000 42593000 24895000 2827 1806 3125 7066;7067 6506;6507 6507 2 KIVEPEVVGESDSEVEGDAWR EERLARHRKIVEPEVV EVEGDAWRMEREDSSE R K I W R M 1 1 0 2 0 0 5 2 0 1 0 1 0 0 1 2 0 1 0 4 0 0 21 1 2329.1074 P55081 P55081 106 126 MFAP1 Microfibrillar-associated protein 1 yes yes 2;3 3.2432E-09 94.463 By MS/MS By MS/MS 3 3 57788000 31868000 25921000 2828 1772 3126;3127 7068;7069;7070;7071;7072;7073 6508;6509;6510;6511;6512 6508 3339;3340 5 KIYEDGDDDMKR EGLMNVLKKIYEDGDD DGDDDMKRTINKAWVE K K I K R T 0 1 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 1 0 0 0 12 2 1483.6613 Q9HB71 Q9HB71 197 208 CACYBP Calcyclin-binding protein yes yes 2;3 3.9407E-11 152.16 By MS/MS By MS/MS 2 2 36780000 20628000 16152000 2829 2686 3128 7074;7075;7076;7077 6513;6514;6515 6514 7897 3 KKDDYMESGTK RAYNRGSRKKDDYMES DYMESGTKKDNSILEI R K K T K K 0 0 0 2 0 0 1 1 0 0 0 3 1 0 0 1 1 0 1 0 0 0 11 2 1300.5969 Q9NZU1 Q9NZU1 568 578 FLRT1 Leucine-rich repeat transmembrane protein FLRT1 yes yes 1 0.028528 43.442 By MS/MS By matching 1 1 54754000 36935000 17819000 2830 2771 3129 7078;7079 6516 6516 0 KKDELSDYAEK KIRDKTSKKKDELSDY ELSDYAEKSTGKGDSC K K K E K S 1 0 0 2 0 0 2 0 0 0 1 3 0 0 0 1 0 0 1 0 0 0 11 2 1324.6511 P46100;A0A096LNL9;A0A096LP59 P46100 1056 1066 ATRX Transcriptional regulator ATRX yes no 2;3 0.0018126 92.906 By MS/MS By MS/MS 1 2 11179000 3519200 7659700 2831 1708 3130 7080;7081;7082 6517;6518 6517 3160 2 KKEEPSQNDISPK SPKSKKAKKKEEPSQN SQNDISPKTKSLRKKK K K K P K T 0 0 1 1 0 1 2 0 0 1 0 3 0 0 2 2 0 0 0 0 0 0 13 2 1498.7627 Q9NR30 Q9NR30 79 91 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 1.2178E-10 133.9 By MS/MS By MS/MS 2 2 117850000 66162000 51691000 2832 2716 3131 7083;7084;7085;7086 6519;6520;6521;6522;6523;6524;6525;6526;6527 6524 5543 9 KKEIQNGNLHESDSESVPR KAEKKKNKKKEIQNGN SDSESVPRDFKLSDAL K K K P R D 0 1 2 1 0 1 3 1 1 1 1 2 0 0 1 3 0 0 0 1 0 0 19 2 2166.0665 Q86UP2 Q86UP2 64 82 KTN1 Kinectin yes yes 3 0.0047902 58.964 By matching By MS/MS 1 1 13698000 6136400 7561900 2833 2236 3132 7087;7088 6528 6528 4477;4478;4479 1 KKEPAITSQNSPEAR TEKDLDEKKKEPAITS SQNSPEAREESTSSGN K K K A R E 2 1 1 0 0 1 2 0 0 1 0 2 0 0 2 2 1 0 0 0 0 0 15 2 1654.8638 P23193;E5RIS7 P23193 90 104 TCEA1 Transcription elongation factor A protein 1 yes no 2;3 0.00014788 106.89 By MS/MS By MS/MS 2 2 94184000 48383000 45802000 2834 1619 3133 7089;7090;7091;7092 6529;6530;6531;6532 6530 2996;2997;6684 4 KKEQSEVSVSPR KTSPDRDKKKEQSEVS SEVSVSPRASKHHYSR K K K P R A 0 1 0 0 0 1 2 0 0 0 0 2 0 0 1 3 0 0 0 2 0 0 12 2 1372.731 Q7L4I2;E9PI52 Q7L4I2 23 34 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 3 0.012008 62.861 By MS/MS By MS/MS 1 1 4689800 0 4689800 2835 2200 3134 7093;7094 6533;6534 6534 4381 2 KKIPDPDSDDVSEVDAR PTLPVEEKKKIPDPDS DVSEVDARHIIENAKQ K K K A R H 1 1 0 5 0 0 1 0 0 1 0 2 0 0 2 2 0 0 0 2 0 0 17 2 1884.9065 Q9HBD4;A0A0A0MT49;P51532 Q9HBD4 688 704 SMARCA4 Transcription activator BRG1 yes no 3 0.00031578 78.419 By MS/MS By matching 1 1 7905600 4092800 3812800 2836 237 3135 7095;7096 6535 6535 427 1 KKLGVSVSPSR WRRSKSPKKKLGVSVS GVSVSPSRARRRRKTS K K K S R A 0 1 0 0 0 0 0 1 0 0 1 2 0 0 1 3 0 0 0 2 0 0 11 2 1156.6928 E7ERS3;Q86VM9;H3BP01 E7ERS3 551 561 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 3 0.016509 60.918 By MS/MS By matching 1 1 5443400 2414700 3028800 2837 727 3136 7097;7098 6536 6536 1300;1301;1302 1 KKMASDQEQLASK ISQLKIKKKKMASDQE DQEQLASKLDKALSLT K K K S K L 2 0 0 1 0 2 1 0 0 0 1 3 1 0 0 2 0 0 0 0 0 0 13 2 1462.745 H9KVB4;O15417;H7C0N9 H9KVB4 1617 1629 TNRC18 Trinucleotide repeat-containing gene 18 protein yes no 2 0.014625 49.988 By MS/MS By matching 1 1 10341000 5429000 4912100 2838 1192 3137 7099;7100 6537 6537 2161;2162 1 KKNDIYGED FDFEEMKRKKNDIYGE KNDIYGED________ R K K E D - 0 0 1 2 0 0 1 1 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1080.5088 P50395 P50395 437 445 GDI2 Rab GDP dissociation inhibitor beta yes yes 2 0.0014493 104.06 By MS/MS By MS/MS 4 2 105620000 47192000 58429000 2839 1737 3138 7101;7102;7103;7104;7105;7106 6538;6539;6540;6541;6542;6543;6544 6544 7629 7 KKPGDASSLPDAGLSPGSQVDSK AKKPAVQKKKPGDASS PGSQVDSKSTFKRLFL K K K S K S 2 0 0 3 0 1 0 3 0 0 2 3 0 0 3 5 0 0 0 1 0 0 23 2 2240.1285 M0R300;M0R0P8;Q13459 M0R300 1391 1413 MYO9B Unconventional myosin-IXb yes no 3 0.0097657 49.005 By matching By MS/MS 1 1 10991000 4734800 6256000 2840 1315 3139 7107;7108 6545 6545 2364 1 KKSIVAVEPR PQPRRRGRKKSIVAVE SIVAVEPRSLIQGAFQ R K K P R S 1 1 0 0 0 0 1 0 0 1 0 2 0 0 1 1 0 0 0 2 0 0 10 2 1125.687 Q5VZL5;H7C1I7 Q5VZL5 1179 1188 ZMYM4 Zinc finger MYM-type protein 4 yes no 3 0.0019935 85.457 By MS/MS By MS/MS 1 1 20257000 11107000 9149600 2841 2125 3140 7109;7110 6546;6547 6546 4227 2 KKSPIINESR DKSKSKDRKKSPIINE SPIINESRSRDRGKKS R K K S R S 0 1 1 0 0 0 1 0 0 2 0 2 0 0 1 2 0 0 0 0 0 0 10 2 1170.6721 Q13523 Q13523 275 284 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 3 0.0013029 94.547 By MS/MS By MS/MS 2 2 45018000 24543000 20475000 2842 1921 3141 7111;7112;7113;7114 6548;6549;6550;6551 6548 3704 4 KKSPNELVDDLFK QQIVGPPRKKSPNELV ELVDDLFKGAKEHGAV R K K F K G 0 0 1 2 0 0 1 0 0 0 2 3 0 1 1 1 0 0 0 1 0 0 13 2 1531.8246 F2Z2K0;Q9UNZ2 F2Z2K0 112 124 NSFL1C NSFL1 cofactor p47 yes no 3 9.4789E-11 141.73 By matching By MS/MS 1 1 10155000 3635900 6518800 2843 848 3142 7115;7116 6552 6552 1532 1 KKSSSEALFK EELSAKKRKKSSSEAL SSSEALFKSFSSAPPL R K K F K S 1 0 0 0 0 0 1 0 0 0 1 3 0 1 0 3 0 0 0 0 0 0 10 2 1123.6237 P42568 P42568 299 308 MLLT3 Protein AF-9 yes yes 3 0.026697 46.88 By MS/MS 1 0 0 0 2844 1697 3143 7117 6553 6553 1 KKTEFLDLDNSPLSPPSPR RTKDKEEKKKTEFLDL PLSPPSPRTKSRTHTR K K K P R T 0 1 1 2 0 0 1 0 0 0 3 2 0 1 4 3 1 0 0 0 0 0 19 2 2140.1164 Q8NCF5 Q8NCF5 188 206 NFATC2IP NFATC2-interacting protein yes yes 3 2.9122E-06 87.468 By MS/MS By MS/MS 1 1 12677000 4602100 8075400 2845 2337 3144 7118;7119 6554;6555;6556 6556 4685 3 KKYAALVVEPTSDGNYVTK KSLLLLKKKKYAALVV SDGNYVTKQELKGLDI K K K T K Q 2 0 1 1 0 0 1 1 0 0 1 3 0 0 1 1 2 0 2 3 0 0 19 2 2082.0997 A0A087WU64;A6NMQ1;P09884 A0A087WU64 1052 1070 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit yes no 2 0.028452 45.115 By MS/MS 1 0 0 0 2846 41 3145 7120 6557 6557 7157 1 KLATPPAAQESSR LDLRGHKRKLATPPAA PAAQESSRRRSRKGHL R K L S R R 3 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 1 0 0 0 0 0 13 1 1354.7205 H0Y760;Q9Y4B4 H0Y760 1086 1098 RAD54L2 Helicase ARIP4 yes no 3 0.00043091 104.16 By MS/MS By MS/MS 1 1 19713000 9553100 10160000 2847 1035 3146 7121;7122 6558;6559;6560 6558 6516 3 KLDDQSEDEALELEGPLITPGSGSIYSSPGLYSK DPTKKKKKKLDDQSED SSPGLYSKTMTPTYDA K K L S K T 1 0 0 3 0 1 4 4 0 2 5 2 0 0 3 6 1 0 2 0 0 0 34 1 3594.7465 G3V3J0;Q96AC1 G3V3J0 49 82 FERMT2 Fermitin family homolog 2 yes no 3 8.9834E-06 60.941 By MS/MS By MS/MS 2 2 109510000 80961000 28545000 2848 969 3147;3148 7123;7124;7125;7126 6561;6562;6563;6564 6564 1763;1764;1765;1766;7420 4 KLEKEEEEGISQESSEEEQ RKPRGRPKKLEKEEEE QESSEEEQ________ K K L E Q - 0 0 0 0 0 2 9 1 0 1 1 2 0 0 0 3 0 0 0 0 0 0 19 2 2235.9867 P17096 P17096 89 107 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2;3 2.3195E-32 147.39 By MS/MS By MS/MS 4 6 965890000 522460000 443440000 2849 1591 3149;3150;3151 7127;7128;7129;7130;7131;7132;7133;7134;7135;7136 6565;6566;6567;6568;6569;6570;6571;6572;6573;6574;6575;6576;6577;6578;6579;6580;6581;6582;6583;6584;6585;6586;6587;6588 6580 2918;2919;2920 24 KLELDGEKETAPEEPGSPAK YKKEVERKKLELDGEK EEPGSPAKSAPASPVQ K K L A K S 2 0 0 1 0 0 5 2 0 0 2 3 0 0 3 1 1 0 0 0 0 0 20 2 2124.0586 P35612 P35612 576 595 ADD2 Beta-adducin yes yes 3 4.1417E-08 89.604 By MS/MS By MS/MS 1 1 28242000 16749000 11493000 2850 1674 3152 7137;7138 6589;6590 6590 3086 2 KLENSPLGEALR KTCQEKFKKLENSPLG SPLGEALRSGQARRSS K K L L R S 1 1 1 0 0 0 2 1 0 0 3 1 0 0 1 1 0 0 0 0 0 0 12 1 1325.7303 D6RDK6;D6RBN5;Q9NX40;D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9 D6RDK6 50 61 OCIAD1 OCIA domain-containing protein 1 yes no 2;3 0.0034327 94.551 By MS/MS By MS/MS 2 1 16203000 9084900 7117900 2851 661 3153 7139;7140;7141 6591;6592;6593 6593 1190 3 KLESVGSGMLDHR ________________ GSGMLDHRVRPGPVPH R K L H R V 0 1 0 1 0 0 1 2 1 0 2 1 1 0 0 2 0 0 0 1 0 0 13 1 1427.7191 Q99767;H0YNE8;H0YNG7;H0YL28;H0YMS0 Q99767 5 17 APBA2 Amyloid beta A4 precursor protein-binding family A member 2 yes no 3 0.020799 44.998 By MS/MS By MS/MS 1 1 5593200 2768300 2824900 2852 2559 3154 7142;7143 6594;6595 6594 5170 2 KLGAGEGGEASVSPEK TPRSKKKKKLGAGEGG EASVSPEKTSTTSKGK K K L E K T 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 2 0 0 0 1 0 0 16 1 1514.7577 Q13428;J3KQ96;E7ETY2 Q13428 1366 1381 TCOF1 Treacle protein yes no 2 0.00039995 93.371 By matching By MS/MS 1 1 11250000 6196500 5053800 2853 1915 3155 7144;7145 6596 6596 3678 1 KLGAGEGGEASVSPEKTSTTSK TPRSKKKKKLGAGEGG EKTSTTSKGKAKRDKA K K L S K G 2 0 0 0 0 0 3 4 0 0 1 3 0 0 1 4 3 0 0 1 0 0 22 2 2120.0597 Q13428;J3KQ96;E7ETY2 Q13428 1366 1387 TCOF1 Treacle protein yes no 3 1.1481E-36 146.8 By MS/MS By MS/MS 1 1 191290000 100900000 90384000 2854 1915 3156 7146;7147 6597;6598 6597 3678 2 KLGDVSPTQIDVSQFGSFKEDTK PALALDERKLGDVSPT GSFKEDTKMSISEGTV R K L T K M 0 0 0 3 0 2 1 2 0 1 1 3 0 2 1 3 2 0 0 2 0 0 23 2 2525.2649 P46821 P46821 1496 1518 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.0040823 64.87 By MS/MS By matching 1 1 7184000 4870800 2313200 2855 1712 3157 7148;7149 6599 6599 6705 1 KLLLGSPSSLSPFSK SASGGLSKKLLLGSPS SSLSPFSKRIKLEKEF K K L S K R 0 0 0 0 0 0 0 1 0 0 4 2 0 1 2 5 0 0 0 0 0 0 15 1 1559.8923 Q9H165 Q9H165 620 634 BCL11A B-cell lymphoma/leukemia 11A yes yes 2 0.0086569 71.685 By MS/MS By matching 1 1 6721900 3890700 2831200 2856 2634 3158 7150;7151 6600 6600 5361;5362;5363;5364 1 KLMFKTEGPDSD GQSTSRHKKLMFKTEG KTEGPDSD________ K K L S D - 0 0 0 2 0 0 1 1 0 0 1 2 1 1 1 1 1 0 0 0 0 0 12 2 1366.6439 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 223 234 TP53 Cellular tumor antigen p53 yes no 2;3 1.8296E-26 177.36 By MS/MS By MS/MS 3 3 581860000 298240000 283630000 2857 118 3159;3160 7152;7153;7154;7155;7156;7157 6601;6602;6603;6604;6605 6603 13 214 4 KLNSPEETAFQTPK SSYPVEPKKLNSPEET ETAFQTPKSSQMPRPS K K L P K S 1 0 1 0 0 1 2 0 0 0 1 2 0 1 2 1 2 0 0 0 0 0 14 1 1588.8097 Q9BTX1 Q9BTX1 403 416 NDC1 Nucleoporin NDC1 yes yes 2 1.4807E-08 129.05 By MS/MS By MS/MS 1 1 25152000 11639000 13513000 2858 2579 3161 7158;7159 6606;6607 6607 5212 2 KLPFPQLSEAR RQAAMTVRKLPFPQLS FPQLSEARICSPKGFA R K L A R I 1 1 0 0 0 1 1 0 0 0 2 1 0 1 2 1 0 0 0 0 0 0 11 1 1284.719 B1AMR4 B1AMR4 458 468 ARHGEF9 yes yes 2 0.011106 62.463 By MS/MS 1 2413900 2413900 0 2859 465 3162 7160 6608 6608 0 KLPPPPGSPLGHSPTASPPPTAR LHISPLAKKLPPPPGS ASPPPTARKMFPGLAA K K L A R K 2 1 0 0 0 0 0 2 1 0 2 1 0 0 9 3 2 0 0 0 0 0 23 1 2258.2172 B9EGQ5;M0QXA7;O95785 B9EGQ5 320 342 WIZ Protein Wiz yes no 3 0.0092535 43.164 By MS/MS By MS/MS 1 1 17587000 5963700 11623000 2860 538 3163 7161;7162 6609;6610 6610 979;980;981 2 KLPPPPPQAPPEEENESEPEEPSGVEGAAFQSR NAKAEKEKKLPPPPPQ EGAAFQSRLPHDRMTS K K L S R L 3 1 1 0 0 2 8 2 0 0 1 1 0 1 9 3 0 0 0 1 0 0 33 1 3525.6536 O60341 O60341 150 182 KDM1A Lysine-specific histone demethylase 1A yes yes 3 0.0040167 44.969 By MS/MS By MS/MS 1 1 19444000 10301000 9143800 2861 1406 3164 7163;7164 6611;6612 6611 2584 2 KLPSTTL ILAQRRVRKLPSTTL_ RKLPSTTL________ R K L T L - 0 0 0 0 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 0 0 0 7 1 758.4538 E9PGT3;Q15418 E9PGT3 718 724 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 yes no 2 0.015389 104.37 By matching By MS/MS 1 1 32683000 18277000 14406000 2862 796 3165 7165;7166 6613 6613 1429;6442 1 KLQHTYLCEEK TPNRVEKKKLQHTYLC HTYLCEEKENNKSFQS K K L E K E 0 0 0 0 1 1 2 0 1 0 2 2 0 0 0 0 1 0 1 0 0 0 11 1 1447.7129 Q6P0N0;G5E9K5 Q6P0N0 157 167 MIS18BP1 Mis18-binding protein 1 yes no 3 0.0033585 71.349 By MS/MS 1 1220800 0 1220800 2863 2150 3166 7167 6614 6614 6901 1 KLSEADNRK AVSKEVTRKLSEADNR LSEADNRKMSRKEKDE R K L R K M 1 1 1 1 0 0 1 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 9 2 1059.5673 C9JA28;Q9UNL2;C9J365 C9JA28 103 111 SSR3 Translocon-associated protein subunit gamma yes no 3 0.004598 81.95 By MS/MS By MS/MS 1 1 14237000 5843800 8393000 2864 576 3167 7168;7169 6615;6616 6616 1055 2 KLSGDQITLPTTVDYSSVPK ICRSGRGRKLSGDQIT VDYSSVPKQTDVEEWT R K L P K Q 0 0 0 2 0 1 0 1 0 1 2 2 0 0 2 3 3 0 1 2 0 0 20 1 2148.1314 E9PJ38;E9PND3;E9PN10;O00559 E9PJ38 34 53 EBAG9 Receptor-binding cancer antigen expressed on SiSo cells yes no 2;3 5.5855E-49 158.52 By MS/MS By MS/MS 2 2 142020000 77011000 65011000 2865 807 3168 7170;7171;7172;7173 6617;6618;6619 6618 1449 3 KLSGDQPAAR KGWESRKRKLSGDQPA SGDQPAARTPRSKKKK R K L A R T 2 1 0 1 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 1 1041.5567 Q13428;J3KQ96;E7ETY2 Q13428 1348 1357 TCOF1 Treacle protein yes no 2;3 0.00060499 91.093 By MS/MS By MS/MS 5 3 381890000 222040000 159850000 2866 1915 3169 7174;7175;7176;7177;7178;7179;7180;7181 6620;6621;6622;6623;6624;6625;6626;6627;6628 6623 3679 9 KLSLGQYDNDAGGQLPFSK QPLGGRLRKLSLGQYD GGQLPFSKCAWGKAGV R K L S K C 1 0 1 2 0 2 0 3 0 0 3 2 0 1 1 2 0 0 1 0 0 0 19 1 2037.0167 E9PCX8;Q68CZ2 E9PCX8 877 895 TNS3 Tensin-3 yes no 2 8.9173E-06 86.727 By matching By MS/MS 1 1 11540000 4558200 6981300 2867 766 3170 7182;7183 6629 6629 1389 1 KLSLPTDLKPDLDVK IEKAKMSRKLSLPTDL LKPDLDVKDNSFSRSR R K L V K D 0 0 0 3 0 0 0 0 0 0 4 3 0 0 2 1 1 0 0 1 0 0 15 2 1680.9662 H0Y332;Q5JRH0;Q5T5C0 H0Y332 83 97 STXBP5 Syntaxin-binding protein 5 yes no 3 0.0020259 68.168 By MS/MS By MS/MS 1 1 4770800 2356500 2414300 2868 1009 3171 7184;7185 6630;6631 6630 1859 2 KLSNPDIFSSTGK GVSPLLFRKLSNPDIF DIFSSTGKVKLQRQLS R K L G K V 0 0 1 1 0 0 0 1 0 1 1 2 0 1 1 3 1 0 0 0 0 0 13 1 1392.7249 Q6P0Q8 Q6P0Q8 72 84 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 2 0.00023522 115.87 By matching By MS/MS 1 1 10318000 5455800 4862700 2869 2151 3172 7186;7187 6632 6632 4283 1 KLSPIIEDSR YSQTLSIKKLSPIIED SPIIEDSREATHSSGF K K L S R E 0 1 0 1 0 0 1 0 0 2 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1156.6452 O60566 O60566 668 677 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 2 0.0091146 80.746 By MS/MS By MS/MS 1 1 17264000 9523900 7739800 2870 1413 3173 7188;7189 6633;6634 6634 2603 2 KLSRSPSPR KKPRSPKRKLSRSPSP LSRSPSPRRHKKEKKK R K L P R R 0 2 0 0 0 0 0 0 0 0 1 1 0 0 2 3 0 0 0 0 0 0 9 2 1026.5934 Q5T757;Q05519;Q5T760 Q5T757 304 312 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.006236 73.36 By MS/MS By MS/MS 1 1 115340000 61917000 53424000 2871 1853 3174 7190;7191 6635;6636 6635 3485;3486;3487 2 KLSSNCSGVEGDVTDEDEGAEMSQR GKILIKAKKLSSNCSG EGAEMSQRMGKENMEQ K K L Q R M 1 1 1 3 1 1 4 3 0 0 1 1 1 0 0 4 1 0 0 2 0 0 25 1 2699.1287 Q9UPR0;H7C276 Q9UPR0 571 595 PLCL2 Inactive phospholipase C-like protein 2;Phosphoinositide phospholipase C yes no 3 8.3372E-05 67.01 By MS/MS By matching 1 1 54935000 36805000 18130000 2872 2869 3175 7192;7193 6637 6637 7101 1 KLSSSDAPAQDTGSSAAAVETDASR KVAGKVTRKLSSSDAP AVETDASRTGAQQKMR R K L S R T 6 1 0 3 0 1 1 1 0 0 1 1 0 0 1 6 2 0 0 1 0 0 25 1 2421.1256 H0YHT2;A0A1B0GV47;Q7Z4S6;H0YIM6 H0YHT2 199 223 KIF21A Kinesin-like protein KIF21A yes no 2;3 1.641E-34 135.58 By MS/MS By MS/MS 2 2 210320000 116310000 94007000 2873 375 3176 7194;7195;7196;7197 6638;6639;6640 6639 707;708;709 3 KLSSSSEPYEEDEFNDDQSIKK AGGGPRKRKLSSSSEP NDDQSIKKTRLDHCAW R K L K K T 0 0 1 3 0 1 4 0 0 1 1 3 0 1 1 5 0 0 1 0 0 0 22 2 2574.1609 D6RAY8;Q9H4L7 D6RAY8 209 230 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 2.1986E-05 78.736 By matching By MS/MS 2 2 85199000 43773000 41426000 2874 653 3177 7198;7199;7200;7201 6641;6642 6641 1179;1180;1181;1182 2 KLSSWDQAETPGHTPSLR QTPGATPKKLSSWDQA PGHTPSLRWDETPGRA K K L L R W 1 1 0 1 0 1 1 1 1 0 2 1 0 0 2 3 2 1 0 0 0 0 18 1 2008.9967 O75533 O75533 214 231 SF3B1 Splicing factor 3B subunit 1 yes yes 3 6.2274E-06 88.168 By MS/MS By MS/MS 2 2 59381000 33729000 25652000 2875 1443 3178;3179 7202;7203;7204;7205 6643;6644;6645 6645 6632;6633 3 KLSVPTSDEEDEVPAPKPR KELMERLKKLSVPTSD EVPAPKPRGGKKTKGG K K L P R G 1 1 0 2 0 0 3 0 0 0 1 2 0 0 4 2 1 0 0 2 0 0 19 2 2093.0641 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 104 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3;4 1.0913E-38 157.02 By MS/MS By MS/MS 4 5 295350000 168350000 127000000 2876 2088 3180;3181;3182 7206;7207;7208;7209;7210;7211;7212;7213;7214 6646;6647;6648;6649;6650;6651;6652;6653;6654;6655;6656;6657 6650 4118;4119;6874 12 KLTELENELNTK SNKVKASRKLTELENE LENELNTK________ R K L T K - 0 0 2 0 0 0 3 0 0 0 3 2 0 0 0 0 2 0 0 0 0 0 12 1 1430.7617 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1770 1781 MLLT4 Afadin yes no 2 5.3001E-08 139 By matching By MS/MS 1 1 17390000 8752400 8637400 2877 431 3183 7215;7216 6658 6658 6330 1 KLTSDEEGEPSGK AQRLLKAKKLTSDEEG EEGEPSGKRKAEDDDK K K L G K R 0 0 0 1 0 0 3 2 0 0 1 2 0 0 1 2 1 0 0 0 0 0 13 1 1375.6467 Q8WVC0 Q8WVC0 627 639 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 2.8602E-10 130.47 By MS/MS By MS/MS 1 1 5700800 5700800 0 2878 2403 3184 7217;7218 6659;6660;6661 6659 4807;6977 3 KMEESDEEAVQAK SSEKAQKRKMEESDEE DEEAVQAKVLRPLRSC R K M A K V 2 0 0 1 0 1 4 0 0 0 0 2 1 0 0 1 0 0 0 1 0 0 13 1 1492.6715 I3VM54;Q9Y2K7 I3VM54 671 683 KDM2A Lysine-specific demethylase 2A yes no 2 3.0939E-10 131.4 By MS/MS By MS/MS 1 1 15134000 6846100 8287500 2879 1216 3185 7219;7220 6662;6663 6662 2201 2 KMGAPESGLAEYLFDKHTLGDSDNES GDHVTNLRKMGAPESG LGDSDNES________ R K M E S - 2 0 1 3 0 0 3 3 1 0 3 2 1 1 1 3 1 0 1 0 0 0 26 2 2810.2705 G3V1D1;G3V192;P02794 G3V1D1 88 113 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes no 3;4 0.00036317 58.952 By MS/MS By MS/MS 2 2 114200000 54695000 59509000 2880 957 3186;3187 7221;7222;7223;7224 6664;6665;6666 6665 109 1739;1740;6482 3 KMLGEDSDEEEEMDTSER QQQILLEKKMLGEDSD EEMDTSERKINAGSQD K K M E R K 0 1 0 3 0 0 6 1 0 0 1 1 2 0 0 2 1 0 0 0 0 0 18 1 2128.8413 A0A087WWF4;A0A087X0M4;Q9BWU0;H7C256 A0A087WWF4 76 93 SLC4A1AP Kanadaptin yes no 2;3 5.0619E-06 97.095 By MS/MS By MS/MS 4 5 140480000 74300000 66180000 2881 76 3188;3189 7225;7226;7227;7228;7229;7230;7231;7232;7233 6667;6668;6669;6670;6671;6672;6673;6674;6675 6667 8;9 131 9 KMQSWYSMLSPTYKQR RNFIRNSKKMQSWYSM LSPTYKQRNEDFRKLF K K M Q R N 0 1 0 0 0 2 0 0 0 0 1 2 2 0 1 3 1 1 2 0 0 0 16 2 2032.9863 S4R3I2;M0R0J9;M0QZ12;Q96CP6 S4R3I2 74 89 GRAMD1A GRAM domain-containing protein 1A yes no 2 0.031002 44.765 By MS/MS 1 0 0 0 2882 1307 3190 7234 6676 6676 7491 1 KMSGGSTMSSGGGNTNNSNSK QPSKRRKRKMSGGSTM NTNNSNSKKKSPASTF R K M S K K 0 0 4 0 0 0 0 5 0 0 0 2 2 0 0 6 2 0 0 0 0 0 21 1 2001.848 Q86U70 Q86U70 300 320 LDB1 LIM domain-binding protein 1 yes yes 3 0.0061112 50.237 By MS/MS By matching 1 1 3517000 2006100 1510900 2883 2233 3191 7235;7236 6677 6677 300 4473;6939 1 KMSIQDSLALQPK PSSPKQARKMSIQDSL DSLALQPKLTRHKELA R K M P K L 1 0 0 1 0 2 0 0 0 1 2 2 1 0 1 2 0 0 0 0 0 0 13 1 1457.7912 E9PFQ4;Q86SQ0;E9PDY7;G5E9V3 E9PFQ4 210 222 PHLDB2 Pleckstrin homology-like domain family B member 2 yes no 3 0.0030596 74.726 By MS/MS 1 0 0 0 2884 784 3192 7237 6678 6678 1409 1 KNEKAEENTDQASPQEDYAGFER AIQNLEERKNEKAEEN EDYAGFERLQSGHLTK R K N E R L 3 1 2 2 0 2 5 1 0 0 0 2 0 1 1 1 1 0 1 0 0 0 23 2 2655.1685 Q9NU22 Q9NU22 4526 4548 MDN1 Midasin yes yes 3 0.0036008 55.128 By matching By MS/MS 1 1 9443100 5476700 3966400 2885 2734 3193 7238;7239 6679;6680 6679 5598 2 KNEVYETFSYPESYSPTLPVSR KLKLQKMKKNEVYETF SPTLPVSRRENNSPSN K K N S R R 0 1 1 0 0 0 3 0 0 0 1 1 0 1 3 4 2 0 3 2 0 0 22 1 2592.2384 Q5H966;Q9UN30 Q5H966 97 118 SCML1 Sex comb on midleg-like protein 1 yes no 3 7.9993E-12 110.34 By MS/MS By MS/MS 1 1 12293000 5674700 6617900 2886 2067 3194 7240;7241 6681;6682 6681 4058;4059 2 KNNLHLSTQNK TKKMMDKRKNNLHLST LHLSTQNKLEASLFSP R K N N K L 0 0 3 0 0 1 0 0 1 0 2 2 0 0 0 1 1 0 0 0 0 0 11 1 1295.6946 Q5T5C7 Q5T5C7 421 431 SARS yes yes 2 0.0092081 58.098 By MS/MS 1 0 0 0 2887 2097 3195 7242 6683 6683 4148;6880 1 KNQKPSQVNGAPGSPTEPAGQK AKSPKLQKKNQKPSQV PTEPAGQKQHQKALPK K K N Q K Q 2 0 2 0 0 3 1 3 0 0 0 3 0 0 4 2 1 0 0 1 0 0 22 2 2219.1295 Q9BQG0;I3L1L3 Q9BQG0 1254 1275 MYBBP1A Myb-binding protein 1A yes no 3 0.00067474 68.587 By MS/MS By MS/MS 2 2 29230000 15281000 13949000 2888 2570 3196;3197 7243;7244;7245;7246 6684;6685;6686 6684 27;37 5188 3 KNSAPQLPLLQSSGPFVEGSIVR SSEVPSKRKNSAPQLP FVEGSIVRISMENFLT R K N V R I 1 1 1 0 0 2 1 2 0 1 3 1 0 1 3 4 0 0 0 2 0 0 23 1 2423.3173 Q8IY18 Q8IY18 33 55 SMC5 Structural maintenance of chromosomes protein 5 yes yes 3 0.00021069 65.766 By MS/MS 1 4778800 0 4778800 2889 2284 3198 7247 6687 6687 4584 1 KNSFGYR SPGLGRGRKNSFGYRK RKNSFGYRKKREEKFT R K N Y R K 0 1 1 0 0 0 0 1 0 0 0 1 0 1 0 1 0 0 1 0 0 0 7 1 870.4348 H0Y4V9;Q92615 H0Y4V9 62 68 LARP4B La-related protein 4B yes no 2 0.013225 146.79 By MS/MS By MS/MS 1 1 34844000 17744000 17100000 2890 1020 3199 7248;7249 6688;6689;6690;6691 6689 1889 4 KNSLRVEGDNIYVR HLQLIEGKKNSLRVEG EGDNIYVRHSNLMLEE K K N V R H 0 2 2 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 1 2 0 0 14 2 1661.8849 O43491;H0Y5B0 O43491 612 625 EPB41L2 Band 4.1-like protein 2 yes no 2;3 3.694E-08 124.81 By MS/MS By MS/MS 4 4 218430000 127920000 90516000 2891 1387 3200;3201 7250;7251;7252;7253;7254;7255;7256;7257 6692;6693;6694;6695;6696;6697 6692 2542;7520 6 KNSLSDHSLGISR FSPVRSVRKNSLSDHS DHSLGISRSKTPVDDP R K N S R S 0 1 1 1 0 0 0 1 1 1 2 1 0 0 0 4 0 0 0 0 0 0 13 1 1412.7372 Q02363 Q02363 12 24 ID2 DNA-binding protein inhibitor ID-2 yes yes 3 0.0031063 64.534 By matching By MS/MS 1 1 22745000 10485000 12260000 2892 1839 3202 7258;7259 6698 6698 3443 1 KNSPGNGSALGPR SISPALARKNSPGNGS NGSALGPRLGSQPIRA R K N P R L 1 1 2 0 0 0 0 3 0 0 1 1 0 0 2 2 0 0 0 0 0 0 13 1 1253.6476 Q9UKE5 Q9UKE5 686 698 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.0095392 72.321 By MS/MS 1 0 0 0 2893 2828 3203 7260 6699 6699 5822 1 KNSRVTFSEDDEIINPEDVDPSVGR IQRPKRKRKNSRVTFS DVDPSVGRFRNMVQTA R K N G R F 0 2 2 4 0 0 3 1 0 2 0 1 0 1 2 3 1 0 0 3 0 0 25 2 2817.3417 A0A0A0MT09;Q12972 A0A0A0MT09 55 79 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes no 3 0.0018982 64.749 By MS/MS By MS/MS 1 1 9856100 4475900 5380100 2894 231 3204 7261;7262 6700;6701 6701 422;6287 2 KNSTDLDSAPEDPTSPK LGSYRKKRKNSTDLDS PEDPTSPKRKMRRRSS R K N P K R 1 0 1 3 0 0 1 0 0 0 1 2 0 0 3 3 2 0 0 0 0 0 17 1 1800.8378 I3L2J0;A0A0A0MQR4;Q96RK0;I3L373;I3L135;I3L1Q4 I3L2J0 2301 2317 CIC Protein capicua homolog yes no 2 0.023737 64.65 By MS/MS By matching 1 1 8415800 4371400 4044400 2895 1207 3205 7263;7264 6702 6702 1 KNTFTAWSDEESDYEIDDRDVNK EMEQMDGRKNTFTAWS IDDRDVNKILIVTQTP R K N N K I 1 1 2 5 0 0 3 0 0 1 0 2 0 1 0 2 2 1 1 1 0 0 23 2 2776.21 Q6PKG0;A0A0B4J210;E5RH50 Q6PKG0 620 642 LARP1 La-related protein 1 yes no 3 2.977E-25 122.64 By MS/MS By MS/MS 1 2 64721000 16341000 48380000 2896 2162 3206;3207 7265;7266;7267 6703;6704;6705;6706 6703 4306;4307;6909 4 KNYDRVMK MLAFNPRKKNYDRVMK KNYDRVMKALDSITSI K K N M K A 0 1 1 1 0 0 0 0 0 0 0 2 1 0 0 0 0 0 1 1 0 0 8 2 1052.5437 E9PFI7;Q8N3A8;F5H3X8 E9PFI7 579 586 PARP8 Poly [ADP-ribose] polymerase 8 yes no 3 0.010403 58.917 By MS/MS 1 0 0 0 2897 780 3208 7268 6707 6707 94 7381 1 KPALFPEPAKTAPPASPEAR LSIDTEPRKPALFPEP PPASPEARKRALFPEP R K P A R K 5 1 0 0 0 0 2 0 0 0 1 2 0 1 6 1 1 0 0 0 0 0 20 2 2074.1211 Q96JM3 Q96JM3 527 546 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.00048251 73.688 By MS/MS By MS/MS 1 1 3065300 0 3065300 2898 2509 3209 7269;7270 6708;6709 6709 5052 2 KPALPVSPAAR QDLSGDFKKPALPVSP LPVSPAARSKAPASSS K K P A R S 3 1 0 0 0 0 0 0 0 0 1 1 0 0 3 1 0 0 0 1 0 0 11 1 1105.6608 A0A087WWF4;A0A087X0M4;Q9BWU0 A0A087WWF4 22 32 SLC4A1AP Kanadaptin yes no 3 0.0030081 69.045 By matching By MS/MS 1 1 2785800 1418700 1367200 2899 76 3210 7271;7272 6710 6710 132 1 KPAQEETEETSSQESAEED WPQQVVQKKPAQEETE SQESAEED________ K K P E D - 2 0 0 1 0 2 7 0 0 0 0 1 0 0 1 3 2 0 0 0 0 0 19 1 2122.8662 P52926 P52926 91 109 HMGA2 High mobility group protein HMGI-C yes yes 2 5.5324E-09 113.14 By MS/MS By MS/MS 1 1 19056000 10439000 8616800 2900 1758 3211 7273;7274 6711;6712;6713;6714 6711 3316 4 KPASSSSAPQNIPK NGTGKFVKKPASSSSA SAPQNIPKRTDVKSQD K K P P K R 2 0 1 0 0 1 0 0 0 1 0 2 0 0 3 4 0 0 0 0 0 0 14 1 1410.7467 H3BQ37;H3BPW9;Q96F86;H3BQP5;H3BU87 H3BQ37 106 119 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2 0.026404 61.409 By MS/MS 1 1230600 1230600 0 2901 1126 3212 7275 6715 6715 1 KPATPAEDDEDDDIDLFGSDNEEEDK RQVEPPAKKPATPAED SDNEEEDKEAAQLREE K K P D K E 2 0 1 8 0 0 5 1 0 1 1 2 0 1 2 1 1 0 0 0 0 0 26 1 2908.1894 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;H0YE72 E9PL71 120 145 EEF1D Elongation factor 1-delta yes no 3 0.00080464 55.061 By MS/MS By matching 1 1 7594900 3783000 3811900 2902 143 3213 7276;7277 6716 6716 250 1 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR RQVEPPAKKPATPAED DKEAAQLREERLRQYA K K P L R E 4 1 1 8 0 1 6 1 0 1 2 2 0 1 2 1 1 0 0 0 0 0 32 2 3576.55 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;H0YE72 E9PL71 120 151 EEF1D Elongation factor 1-delta yes no 3;4 9.3725E-37 113.87 By MS/MS By MS/MS 2 3 985900000 512630000 473270000 2903 143 3214 7278;7279;7280;7281;7282 6717;6718;6719;6720 6720 250 4 KPEDVLDDDDAGSAPLK IFIYEKRRKPEDVLDD DAGSAPLKSSGQHQND R K P L K S 2 0 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 17 1 1783.8476 A0A087WUV8;P35613 A0A087WUV8 154 170 BSG Basigin yes no 2;3 3.8036E-07 116.6 By MS/MS By MS/MS 1 2 18260000 8203600 10056000 2904 51 3215 7283;7284;7285 6721;6722;6723 6721 94 3 KPESPYGNLCDAPDSPRPVK NVRKPTPRKPESPYGN PDSPRPVKASREDSGL R K P V K A 1 1 1 2 1 0 1 1 0 0 1 2 0 0 5 2 0 0 1 1 0 0 20 2 2226.0739 Q9UKA4 Q9UKA4 419 438 AKAP11 A-kinase anchor protein 11 yes yes 3 4.8351E-05 76.351 By MS/MS By MS/MS 2 2 25198000 14299000 10899000 2905 2827 3216;3217 7286;7287;7288;7289 6724;6725;6726 6726 5817;7934 2 KPGDGEVSPSTEDAPFQHSPLGK KPFSLKEKKPGDGEVS FQHSPLGKAAGRTGAS K K P G K A 1 0 0 2 0 1 2 3 1 0 1 2 0 1 4 3 1 0 0 1 0 0 23 1 2379.1343 O60318 O60318 520 542 MCM3AP Germinal-center associated nuclear protein yes yes 3 0.00013853 67.911 By MS/MS By matching 1 1 13003000 6451600 6551400 2906 1405 3218 7290;7291 6727 6727 2583 1 KPGPPLSPEIR PPVSPELRKPGPPLSP PPLSPEIRSPAGSPEL R K P I R S 0 1 0 0 0 0 1 1 0 1 1 1 0 0 4 1 0 0 0 0 0 0 11 1 1189.6819 Q96JM3 Q96JM3 421 431 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 0.0037811 94.673 By MS/MS By MS/MS 2 1 8835300 5726900 3108400 2907 2509 3219 7292;7293;7294 6728;6729;6730 6728 5053 3 KPGPPLSPEIRSPAGSPELR PPVSPELRKPGPPLSP PAGSPELRKPSGSPDL R K P L R K 1 2 0 0 0 0 2 2 0 1 2 1 0 0 6 3 0 0 0 0 0 0 20 2 2084.1378 Q96JM3 Q96JM3 421 440 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.0067552 50.14 By MS/MS 1 41035000 41035000 0 2908 2509 3220 7295 6731 6731 5053;5054;5055 1 KPGPSGPSESPK KPVFPETRKPGPSGPS SGPSESPKAASDIWKP R K P P K A 0 0 0 0 0 0 1 2 0 0 0 2 0 0 4 3 0 0 0 0 0 0 12 1 1166.5932 Q96JM3 Q96JM3 498 509 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.015737 71.529 By MS/MS By matching 1 1 18745000 10489000 8256200 2909 2509 3221 7296;7297 6732 6732 5056 1 KPIETGSPK EKEKKEEKKPIETGSP PIETGSPKTKECSVEK K K P P K T 0 0 0 0 0 0 1 1 0 1 0 2 0 0 2 1 1 0 0 0 0 0 9 1 955.53385 Q5T757;Q05519 Q5T757 383 391 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.0037705 137.4 By matching By MS/MS 1 1 166470000 103300000 63177000 2910 1853 3222 7298;7299 6733;6734 6734 3484 2 KPIKYLEESDEDDLF RAKSVRAKKPIKYLEE ESDEDDLF________ K K P L F - 0 0 0 3 0 0 3 0 0 1 2 2 0 1 1 1 0 0 1 0 0 0 15 2 1839.8778 P11388;J3QR57 P11388 1517 1531 TOP2A DNA topoisomerase 2-alpha yes no 2 0.00043214 110.38 By MS/MS By MS/MS 1 1 112890000 59560000 53333000 2911 1565 3223 7300;7301 6735;6736 6736 2873 2 KPKVEEESTGDPFGFDSDDESLPVSSK PDIQEIPKKPKVEEES ESLPVSSKNLAQVKCS K K P S K N 0 0 0 4 0 0 4 2 0 0 1 3 0 2 3 5 1 0 0 2 0 0 27 2 2925.3404 Q7Z5K2 Q7Z5K2 61 87 WAPAL Wings apart-like protein homolog yes yes 3 0.021965 43.099 By matching By MS/MS 1 1 10770000 5249900 5520400 2912 2220 3224 7302;7303 6737 6737 4438;4439 1 KPLPDHVSIVEPKDEILPTTPISEQK PTGKIGPKKPLPDHVS TTPISEQKGGKPEPPA K K P Q K G 0 0 0 2 0 1 3 0 1 3 2 3 0 0 5 2 2 0 0 2 0 0 26 2 2909.575 P23396;E9PL09;E9PPU1;H0YEU2;E9PSF4 P23396 202 227 RPS3 40S ribosomal protein S3 yes no 4 6.3925E-08 81.65 By MS/MS 1 20445000 0 20445000 2913 1622 3225 7304 6738;6739;6740 6738 6685;6686 3 KPLSLAGDEETECQSSPK ALQLRPTRKPLSLAGD TECQSSPKHSSRERRR R K P P K H 1 0 0 1 1 1 3 1 0 0 2 2 0 0 2 3 1 0 0 0 0 0 18 1 1974.9204 F5H1K3;Q86TN4 F5H1K3 83 100 TRPT1 tRNA 2-phosphotransferase 1 yes no 3 0.00061796 69.188 By matching By MS/MS 1 1 8271000 5112400 3158700 2914 877 3226 7305;7306 6741 6741 1574;1575 1 KPNIFYSGPASPARPR LEKPRHQRKPNIFYSG PASPARPRYRLSSAGP R K P P R Y 2 2 1 0 0 0 0 1 0 1 0 1 0 1 4 2 0 0 1 0 0 0 16 2 1756.9373 Q6PL18 Q6PL18 317 332 ATAD2 ATPase family AAA domain-containing protein 2 yes yes 3 0.017423 51.786 By MS/MS By matching 1 1 20195000 11616000 8578600 2915 2163 3227 7307;7308 6742 6742 4316 1 KPPAPPSPVQSQSPSTNWSPAVPVK GSPEPAAKKPPAPPSP WSPAVPVKKAKSPTPS K K P V K K 2 0 1 0 0 2 0 0 0 0 0 2 0 0 8 5 1 1 0 3 0 0 25 1 2582.3493 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 772 796 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 4.1444E-16 103.03 By MS/MS By MS/MS 3 3 103820000 62577000 41241000 2916 442 3228;3229;3230 7309;7310;7311;7312;7313;7314 6743;6744;6745;6746;6747;6748;6749;6750;6751 6745 838;839;840;841;842;6336 9 KPPAPPSPVQSQSPSTNWSPAVPVKK GSPEPAAKKPPAPPSP SPAVPVKKAKSPTPSP K K P K K A 2 0 1 0 0 2 0 0 0 0 0 3 0 0 8 5 1 1 0 3 0 0 26 2 2710.4442 A9Z1X7;Q8IYB3 A9Z1X7 772 797 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3;4 1.1707E-05 72.167 By MS/MS By MS/MS 5 3 142200000 90764000 51432000 2917 442 3231;3232 7315;7316;7317;7318;7319;7320;7321;7322 6752;6753;6754;6755;6756;6757;6758;6759;6760;6761;6762;6763 6762 838;839;840;841;842;6336 11 KPSDEEFASR LPKRKPERKPSDEEFA SDEEFASRKSTAALEE R K P S R K 1 1 0 1 0 0 2 0 0 0 0 1 0 1 1 2 0 0 0 0 0 0 10 1 1164.5411 B1ALK7;Q14155;E9PDQ5 B1ALK7 514 523 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes no 2 0.030036 67.456 By MS/MS By matching 1 1 10981000 5368300 5612600 2918 462 3233 7323;7324 6764 6764 1 KPSDGSPDTKPSR LLPHAFSRKPSDGSPD SPDTKPSRLASKTKTS R K P S R L 0 1 0 2 0 0 0 1 0 0 0 2 0 0 3 3 1 0 0 0 0 0 13 2 1370.679 Q92733 Q92733 207 219 PRCC Proline-rich protein PRCC yes yes 3 0.0011353 92.096 By MS/MS By matching 1 1 25104000 9944900 15159000 2919 2435 3234 7325;7326 6765 6765 4899 1 KPSEDEVLNK AAITETQRKPSEDEVL SEDEVLNKGFKDTSQY R K P N K G 0 0 1 1 0 0 2 0 0 0 1 2 0 0 1 1 0 0 0 1 0 0 10 1 1157.5928 Q8NDI1 Q8NDI1 1056 1065 EHBP1 EH domain-binding protein 1 yes yes 2 0.0014988 96.334 By MS/MS By MS/MS 1 1 0 0 0 2920 2344 3235 7327;7328 6766;6767 6767 4701 2 KPSGDSQPSSPR SPLLAQPRKPSGDSQP DSQPSSPRYGYEPPLY R K P P R Y 0 1 0 1 0 1 0 1 0 0 0 1 0 0 3 4 0 0 0 0 0 0 12 1 1241.6 Q9C0H5 Q9C0H5 294 305 ARHGAP39 Rho GTPase-activating protein 39 yes yes 2 0.016972 53.869 By MS/MS 1 0 0 0 2921 2621 3236 7329 6768 6768 5321;5322 1 KPSGSPDLWK PAGSPELRKPSGSPDL SGSPDLWKLSPDQRKT R K P W K L 0 0 0 1 0 0 0 1 0 0 1 2 0 0 2 2 0 1 0 0 0 0 10 1 1113.5819 Q96JM3 Q96JM3 441 450 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 4.9295E-05 138.42 By MS/MS By MS/MS 1 1 15034000 9005300 6028300 2922 2509 3237 7330;7331 6769;6770 6769 5057 2 KPSGSPDLWKLSPDQR PAGSPELRKPSGSPDL WKLSPDQRKTSPASLD R K P Q R K 0 1 0 2 0 1 0 1 0 0 2 2 0 0 3 3 0 1 0 0 0 0 16 2 1809.9373 Q96JM3 Q96JM3 441 456 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.017114 54.728 By MS/MS By matching 1 1 15201000 8028100 7172600 2923 2509 3238 7332;7333 6771 6771 5057;5058 1 KPSIVTK SGSSRSKRKPSIVTKY RKPSIVTKYVESDDEK R K P T K Y 0 0 0 0 0 0 0 0 0 1 0 2 0 0 1 1 1 0 0 1 0 0 7 1 771.48544 P46100;A0A096LNL9;A0A096LNW1;A0A096LNN3;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100 82 88 ATRX Transcriptional regulator ATRX yes no 2 0.016964 98.044 By MS/MS 1 0 0 0 2924 1708 3239 7334 6772 6772 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK REVTPYIKKPSLVSDL SEDSGSPKHQNSTKDR K K P P K H 2 0 0 2 0 1 2 3 0 0 2 2 0 1 5 8 0 1 0 1 0 0 30 1 3043.4411 Q13425;H7BY41;H0YCS0 Q13425 206 235 SNTB2 Beta-2-syntrophin yes no 3 0.0079752 42.367 By MS/MS By MS/MS 1 1 13028000 7277500 5750300 2925 1914 3240 7335;7336 6773;6774 6773 3672 2 KPSPAQAAETPALELPLPSVPAPAPL KLEQLDHRKPSPAQAA SVPAPAPL________ R K P P L - 6 0 0 0 0 1 2 0 0 0 4 1 0 0 8 2 1 0 0 1 0 0 26 1 2561.4105 A0A0X1KG71;Q8WX92 A0A0X1KG71 603 628 NELFB Negative elongation factor B yes no 3 0.00017566 58.974 By MS/MS By MS/MS 1 1 50919000 41893000 9026000 2926 355 3241 7337;7338 6775;6776 6775 663;6316 2 KPSPEPEGEVGPPK VARTARKRKPSPEPEG EGEVGPPKINGEAQPW R K P P K I 0 0 0 0 0 0 3 2 0 0 0 2 0 0 5 1 0 0 0 1 0 0 14 1 1446.7355 Q7Z5L9 Q7Z5L9 358 371 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 1.9276E-10 112.62 By MS/MS By MS/MS 1 1 9777500 5340200 4437300 2927 2221 3242 7339;7340 6777;6778 6777 4441 1 KPSPQPSSPR QQPAQQPKKPSPQPSS SPQPSSPRQVKRAVVV K K P P R Q 0 1 0 0 0 1 0 0 0 0 0 1 0 0 4 3 0 0 0 0 0 0 10 1 1079.5724 G3V5E1;O75909 G3V5E1 322 331 CCNK Cyclin-K yes no 2 0.0061755 96.067 By MS/MS By MS/MS 1 1 33659000 18893000 14767000 2928 981 3243 7341;7342 6779;6780;6781 6779 1786;1787 3 KPSPSESPEPWKPFPAVSPEPR RTTSPEPRKPSPSESP PAVSPEPRRPAPAVSP R K P P R R 1 1 0 0 0 0 3 0 0 0 0 2 0 1 8 4 0 1 0 1 0 0 22 2 2445.2329 Q96JM3 Q96JM3 280 301 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.00065594 69.256 By MS/MS By MS/MS 2 2 30958000 16436000 14522000 2929 2509 3244;3245 7343;7344;7345;7346 6782;6783;6784;6785 6784 5059;5060 4 KPSTSDDSDSNFEKIVSK KTKNRRKRKPSTSDDS NFEKIVSKAVTSKKSK R K P S K A 0 0 1 3 0 0 1 0 0 1 0 3 0 1 1 5 1 0 0 1 0 0 18 2 1982.9433 P11388 P11388 1467 1484 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.011709 57.238 By MS/MS 1 0 0 0 2930 1565 3246 7347 6786 6786 2874;2875;2876;2877 1 KPSVGVPPPASPSYPR KAPPPVARKPSVGVPP PASPSYPRAEPLTAPP R K P P R A 1 1 0 0 0 0 0 1 0 0 0 1 0 0 6 3 0 0 1 2 0 0 16 1 1634.878 Q9P206 Q9P206 969 984 KIAA1522 Uncharacterized protein KIAA1522 yes yes 2;3 0.0020536 73.11 By MS/MS By MS/MS 4 4 14328000 10135000 4192200 2931 2779 3247;3248 7348;7349;7350;7351;7352;7353;7354;7355 6787;6788;6789;6790;6791;6792;6793 6789 5706;5707;5708 6 KPSVSEEVQATPNK IQSRKVERKPSVSEEV EVQATPNKAGPKLKDP R K P N K A 1 0 1 0 0 1 2 0 0 0 0 2 0 0 2 2 1 0 0 2 0 0 14 1 1512.7784 Q9UKJ3 Q9UKJ3 1105 1118 GPATCH8 G patch domain-containing protein 8 yes yes 2 1.0101E-11 130.95 By MS/MS By MS/MS 1 1 11020000 4466500 6553800 2932 2831 3249 7356;7357 6794;6795 6795 5829 2 KPTGSLPSPSGVR NNGTVLPKKPTGSLPS LPSPSGVRKETAVPAT K K P V R K 0 1 0 0 0 0 0 2 0 0 1 1 0 0 3 3 1 0 0 1 0 0 13 1 1281.7041 G3V497;G3V4H6;G3V538;G3V500;G3V3N9;F8W717;O00423 G3V497 75 87 EML1 Echinoderm microtubule-associated protein-like 1 yes no 3 0.0036127 71.402 By MS/MS 1 0 0 0 2933 936 3250 7358 6796 6796 1681 1 KPVTVSPTTPTSPTEGEAS AELDRITRKPVTVSPT SPTEGEAS________ R K P A S - 1 0 0 0 0 0 2 1 0 0 0 1 0 0 4 3 5 0 0 2 0 0 19 1 1884.9317 Q9Y6G9;E9PHI6 Q9Y6G9 505 523 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2;3 1.6497E-13 125.39 By MS/MS By MS/MS 4 4 806750000 469150000 337590000 2934 2947 3251;3252 7359;7360;7361;7362;7363;7364;7365;7366 6797;6798;6799;6800;6801;6802;6803;6804;6805;6806 6798 6123;6124;7139;7140;7141 10 KPYRIESDEEEDFENVGK PSEQESTKKPYRIESD EDFENVGKVGSPLDYS K K P G K V 0 1 1 2 0 0 5 1 0 1 0 2 0 1 1 1 0 0 1 1 0 0 18 2 2183.0019 Q96T23 Q96T23 1339 1356 RSF1 Remodeling and spacing factor 1 yes yes 3 0.010401 54.073 By MS/MS By MS/MS 1 1 10248000 5157800 5090200 2935 2544 3253 7367;7368 6807;6808 6807 5138 2 KQAREESEESEAEPVQR PGKASVSRKQAREESE SEAEPVQRTAKKVEGN R K Q Q R T 2 2 0 0 0 2 6 0 0 0 0 1 0 0 1 2 0 0 0 1 0 0 17 2 2000.9399 Q9BW71 Q9BW71 190 206 HIRIP3 HIRA-interacting protein 3 yes yes 3 0.00038929 76.678 By MS/MS By matching 2 2 55551000 29587000 25963000 2936 2589 3254;3255 7369;7370;7371;7372 6809;6810 6809 5234;5235 2 KQEGTPEGLYL SKENVLYKKQEGTPEG GTPEGLYL________ K K Q Y L - 0 0 0 0 0 1 2 2 0 0 2 1 0 0 1 0 1 0 1 0 0 0 11 1 1233.6241 P62191 P62191 430 440 PSMC1 26S protease regulatory subunit 4 yes yes 2 3.357E-09 162.49 By MS/MS By MS/MS 2 2 21222000 12873000 8348900 2937 1792 3256 7373;7374;7375;7376 6811;6812;6813;6814 6811 6745;7657 4 KQETAAVCGETDEEAGESGGEGIFR TRPLHLAKKQETAAVC SGGEGIFRERDEFVIR K K Q F R E 3 1 0 1 1 1 6 5 0 1 0 1 0 1 0 1 2 0 0 1 0 0 25 1 2626.1453 Q9ULL5 Q9ULL5 730 754 PRR12 Proline-rich protein 12 yes yes 3 0.021885 42.024 By MS/MS By matching 1 1 25077000 14353000 10724000 2938 2851 3257 7377;7378 6815 6815 1 KQFKDLFDLNSSEEDDTEGFSER ADRKDEDRKQFKDLFD DTEGFSERGILRPLST R K Q E R G 0 1 1 4 0 1 4 1 0 0 2 2 0 3 0 3 1 0 0 0 0 0 23 2 2735.2198 Q9Y3T9 Q9Y3T9 662 684 NOC2L Nucleolar complex protein 2 homolog yes yes 3 0.016967 47.931 By MS/MS By matching 1 1 9656900 5774300 3882500 2939 2912 3258 7379;7380 6816 6816 6054;6055 1 KQGTDAVRTLSNAEDYLDDEDSD ACASLLKKKQGTDAVR YLDDEDSD________ K K Q S D - 2 1 1 6 0 1 2 1 0 0 2 1 0 0 0 2 2 0 1 1 0 0 23 2 2556.11 Q92882 Q92882 192 214 OSTF1 Osteoclast-stimulating factor 1 yes yes 3 0.0038027 53.496 By matching By MS/MS 1 1 25662000 13357000 12306000 2940 2443 3259 7381;7382 6817 6817 4918;4919;7828 1 KQHYLSSEDEPDDNPDVLDSR RHMPKRKRKQHYLSSE NPDVLDSRIETAQRQC R K Q S R I 0 1 1 5 0 1 2 0 1 0 2 1 0 0 2 3 0 0 1 1 0 0 21 1 2458.0884 Q8NFC6 Q8NFC6 2774 2794 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.0022901 67.928 By MS/MS By MS/MS 1 1 22911000 13137000 9774300 2941 2353 3260 7383;7384 6818;6819;6820 6820 4714;4715;7807 3 KQKSYTLVVAK RFIPPWLKKQKSYTLV SYTLVVAKDGGDKKEP K K Q A K D 1 0 0 0 0 1 0 0 0 0 1 3 0 0 0 1 1 0 1 2 0 0 11 2 1263.7551 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 84 94 EPB41L2 Band 4.1-like protein 2 yes no 3 0.0074493 69.456 By MS/MS By MS/MS 1 1 6930700 3718600 3212200 2942 1387 3261 7385;7386 6821;6822 6822 2543;6617;7521 2 KQMRVFCQICQHYLTNVNTTVK KEDLLRLKKQMRVFCQ TNVNTTVKEQAFTILC K K Q V K E 0 1 2 0 2 3 0 0 1 1 1 2 1 1 0 0 3 0 1 3 0 0 22 2 2767.372 Q8N3U4 Q8N3U4 763 784 STAG2 Cohesin subunit SA-2 yes yes 2 0.026604 43.03 By MS/MS 1 0 0 0 2943 2307 3262 7387 6823 6823 1 KQPPVSPGTALVGSQK KRGRGRPRKQPPVSPG TALVGSQKEPSEVPTP R K Q Q K E 1 0 0 0 0 2 0 2 0 0 1 2 0 0 3 2 1 0 0 2 0 0 16 1 1592.8886 P17096 P17096 31 46 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 3 0.0027216 58.93 By matching By MS/MS 1 1 7038200 3289900 3748400 2944 1591 3263 7388;7389 6824 6824 2921;6676 1 KQPPVSPGTALVGSQKEPSEVPTPK KRGRGRPRKQPPVSPG PSEVPTPKRPRGRPKG R K Q P K R 1 0 0 0 0 2 2 2 0 0 1 3 0 0 6 3 2 0 0 3 0 0 25 2 2557.3752 P17096 P17096 31 55 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 3;4 0.00088472 55.158 By MS/MS By MS/MS 2 1 23846000 15441000 8404700 2945 1591 3264;3265 7390;7391;7392 6825;6826 6825 2921;6676 2 KQQQEPTGEPSPK KRGRGRPRKQQQEPTG PTGEPSPKRPRGRPKG R K Q P K R 0 0 0 0 0 3 2 1 0 0 0 2 0 0 3 1 1 0 0 0 0 0 13 1 1452.7209 P52926;F5H2U8;F5H2A4;F5H6H0 P52926 34 46 HMGA2 High mobility group protein HMGI-C yes no 2;3 3.7551E-38 184.87 By MS/MS By MS/MS 2 2 81857000 29481000 52376000 2946 1758 3266 7393;7394;7395;7396 6827;6828;6829;6830;6831;6832;6833 6833 3317;6733 7 KQSFDDNDSEELEDKDSK KKKGQKGKKQSFDDND ELEDKDSKSKKTAKPK K K Q S K S 0 0 1 5 0 1 3 0 0 0 1 3 0 1 0 3 0 0 0 0 0 0 18 2 2127.908 A0A087WUT6;O60841 A0A087WUT6 105 122 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 2.2086E-38 159.1 By MS/MS By MS/MS 3 4 222090000 98484000 123600000 2947 49 3267;3268 7397;7398;7399;7400;7401;7402;7403 6834;6835;6836;6837;6838;6839 6834 81;82 6 KQSGSPTLDTAPNGR NFGKNIYRKQSGSPTL LDTAPNGRYGIGYLMA R K Q G R Y 1 1 1 1 0 1 0 2 0 0 1 1 0 0 2 2 2 0 0 0 0 0 15 1 1527.7641 Q9H2J7 Q9H2J7 697 711 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.0005487 103.39 By MS/MS By MS/MS 3 3 37738000 17939000 19799000 2948 2645 3269;3270;3271 7404;7405;7406;7407;7408;7409 6840;6841;6842;6843;6844;6845 6843 5388;5389 6 KQSLGELIGTLNAAK GNWKMNGRKQSLGELI IGTLNAAKVPADTEVV R K Q A K V 2 0 1 0 0 1 1 2 0 1 3 2 0 0 0 1 1 0 0 0 0 0 15 1 1541.8777 P60174 P60174 56 70 TPI1 Triosephosphate isomerase yes yes 2;3 2.2341E-101 216.16 By MS/MS By MS/MS 2 2 544660000 320140000 224520000 2949 1781 3272 7410;7411;7412;7413 6846;6847;6848;6849 6849 3356 4 KQSSSEISLAVER DEAWRQRRKQSSSEIS EISLAVERARRRREEE R K Q E R A 1 1 0 0 0 1 2 0 0 1 1 1 0 0 0 4 0 0 0 1 0 0 13 1 1432.7522 P48634 P48634 454 466 PRRC2A Protein PRRC2A yes yes 2;3 6.9725E-30 181.97 By MS/MS By MS/MS 2 2 46378000 28824000 17554000 2950 1718 3273 7414;7415;7416;7417 6850;6851;6852;6853 6850 3209;3210;3211 4 KREEGSDIEDEDMEELLNDTR KKKMNEKRKREEGSDI EELLNDTRLLKKLKKG R K R T R L 0 2 1 4 0 0 6 1 0 1 2 1 1 0 0 1 1 0 0 0 0 0 21 2 2522.1079 F5H5U2;Q8NHQ9 F5H5U2 508 528 DDX55 ATP-dependent RNA helicase DDX55 yes no 3 1.6592E-05 81.356 By MS/MS By MS/MS 2 2 93643000 41585000 52058000 2951 890 3274;3275 7418;7419;7420;7421 6854;6855;6856 6854 102 1597 3 KREPEDEGEDDD EEERGQKRKREPEDEG EDEGEDDD________ R K R D D - 0 1 0 4 0 0 4 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 12 2 1432.559 P39687 P39687 238 249 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes yes 2 0.029897 63.408 By matching By MS/MS 1 1 6981900 2784500 4197400 2952 1681 3276 7422;7423 6857 6857 1 KRESESESDETPPAAPQLIK EAAKTAKRKRESESES PAAPQLIKKEKKKSKK R K R I K K 2 1 0 1 0 1 4 0 0 1 1 2 0 0 3 3 1 0 0 0 0 0 20 2 2211.1019 O60832 O60832 448 467 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 0.0015002 69.525 By MS/MS By MS/MS 2 2 79248000 40401000 38847000 2953 1423 3277;3278 7424;7425;7426;7427 6858;6859;6860;6861;6862 6861 2622;2623;2624 5 KRETDDEGEDD EGGKGEKRKRETDDEG TDDEGEDD________ R K R D D - 0 1 0 4 0 0 3 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 11 2 1307.5113 Q92688 Q92688 241 251 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes yes 2 0.0072935 83.204 By MS/MS 1 80566000 0 80566000 2954 2432 3279 7428 6863;6864 6863 6984 2 KRPQSPSPR NKDTPQEKKRPQSPSP RPQSPSPRRETGKESR K K R P R R 0 2 0 0 0 1 0 0 0 0 0 1 0 0 3 2 0 0 0 0 0 0 9 2 1051.5887 A0A0A0MTP7;F8VXG7;Q99590 A0A0A0MTP7 752 760 SCAF11 Protein SCAF11 yes no 3 0.014476 65.241 By MS/MS By matching 1 1 8008000 2533100 5474900 2955 251 3280 7429;7430 6865 6865 455 1 KRQSPEPSPVTLGR SESKRRCRKRQSPEPS PSPVTLGRRSSGRQGG R K R G R R 0 2 0 0 0 1 1 1 0 0 1 1 0 0 3 2 1 0 0 1 0 0 14 2 1550.8529 Q9NRL2 Q9NRL2 1410 1423 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 3 0.0010145 85.271 By MS/MS By MS/MS 1 1 28912000 14990000 13922000 2956 2721 3281 7431;7432 6866;6867 6867 5560 2 KRSEGFSMDR PVKVERTRKRSEGFSM SEGFSMDRKVEKKKEP R K R D R K 0 2 0 1 0 0 1 1 0 0 0 1 1 1 0 2 0 0 0 0 0 0 10 2 1211.5717 Q7Z4V5;K7ERA4 Q7Z4V5 452 461 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 3 0.0014512 92.295 By MS/MS By MS/MS 1 1 111750000 51212000 60537000 2957 2218 3282 7433;7434 6868;6869 6868 4436 2 KRSPSPSPTPEAK KGGNYKKRKRSPSPSP PSPTPEAKKKNAKKGP R K R A K K 1 1 0 0 0 0 1 0 0 0 0 2 0 0 4 3 1 0 0 0 0 0 13 2 1380.7361 F8VXC8;Q8TAQ2 F8VXC8 300 312 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2;3 0.0028979 100.18 By MS/MS By MS/MS 2 2 102850000 54648000 48204000 2958 925 3283 7435;7436;7437;7438 6870;6871;6872;6873;6874;6875 6873 1661;1662;1663 6 KRSSSEDAESLAPR PEVRTGKRKRSSSEDA DAESLAPRSKVKKIIQ R K R P R S 2 2 0 1 0 0 2 0 0 0 1 1 0 0 1 4 0 0 0 0 0 0 14 2 1531.759 Q4G0J3;H0YA82 Q4G0J3 296 309 LARP7 La-related protein 7 yes no 2;3 1.1722E-05 119.08 By MS/MS By MS/MS 3 3 85837000 44450000 41387000 2959 2046 3284;3285 7439;7440;7441;7442;7443;7444 6876;6877;6878;6879;6880;6881 6877 4001;4002;4003 6 KRSVAVSDEEEVEEEAER LSPATPSRKRSVAVSD EVEEEAERRKERCKRG R K R E R R 2 2 0 1 0 0 7 0 0 0 0 1 0 0 0 2 0 0 0 3 0 0 18 2 2089.9764 Q9Y6X9 Q9Y6X9 737 754 MORC2 MORC family CW-type zinc finger protein 2 yes yes 3 0.0056875 61.256 By MS/MS By MS/MS 1 1 27817000 16587000 11230000 2960 2955 3286 7445;7446 6882;6883 6883 6139;6140 2 KRSVQEGENPDDGVR EGMSKRKRKRSVQEGE ENPDDGVRGSPPEDYR R K R V R G 0 2 1 2 0 1 2 2 0 0 0 1 0 0 1 1 0 0 0 2 0 0 15 2 1684.8129 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 15 29 RBM34 RNA-binding protein 34 yes no 3 0.00025824 100.4 By MS/MS By MS/MS 1 1 20487000 8846100 11641000 2961 395 3287 7447;7448 6884;6885 6885 761 2 KSAEPSANTTLVSETEEEGSVPAFGAAAK LLSGKSPRKSAEPSAN PAFGAAAKPGMVSAGQ R K S A K P 6 0 1 0 0 0 5 2 0 0 1 2 0 1 2 4 3 0 0 2 0 0 29 1 2877.388 Q13428;J3KQ96;E7ETY2 Q13428 159 187 TCOF1 Treacle protein yes no 3 4.2826E-05 65.765 By MS/MS By MS/MS 1 1 31859000 21019000 10841000 2962 1915 3288 7449;7450 6886;6887 6886 3680;6794;6795 2 KSASPEVSEGHENQHGQESEAK DEAWAFVRKSASPEVS HGQESEAKASKRLREP R K S A K A 2 0 1 0 0 2 5 2 2 0 0 2 0 0 1 4 0 0 0 1 0 0 22 1 2364.0578 O60930 O60930 73 94 RNASEH1 Ribonuclease H1 yes yes 4 0.00013176 72.383 By MS/MS By MS/MS 1 1 30885000 21600000 9284600 2963 1426 3289 7451;7452 6888;6889 6888 2627 2 KSDSSGQEYSL TTPSPRHKKSDSSGQE SSGQEYSL________ K K S S L - 0 0 0 1 0 1 1 1 0 0 1 1 0 0 0 4 0 0 1 0 0 0 11 1 1199.5306 Q9Y597 Q9Y597 805 815 KCTD3 BTB/POZ domain-containing protein KCTD3 yes yes 2 0.015951 73.273 By MS/MS 1 2291000 0 2291000 2964 2926 3290 7453 6890 6890 6080 1 KSEAGHASSPDSEVTSLCQK EVPEIFTKKSEAGHAS EVTSLCQKEKAELAPV K K S Q K E 2 0 0 1 1 1 2 1 1 0 1 2 0 0 1 5 1 0 0 1 0 0 20 1 2116.9695 Q6NZY4 Q6NZY4 590 609 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 3 0.00095943 64.26 By MS/MS By MS/MS 1 1 11132000 7350400 3781900 2965 2149 3291 7454;7455 6891;6892 6891 4279;4280 2 KSEAPAEVTHFSPK QKVAQRIKKSEAPAEV EVTHFSPKSIPDYDFE K K S P K S 2 0 0 0 0 0 2 0 1 0 0 2 0 1 2 2 1 0 0 1 0 0 14 1 1526.7729 Q6PID6 Q6PID6 186 199 TTC33 Tetratricopeptide repeat protein 33 yes yes 2 0.0034178 84.41 By MS/MS By matching 1 1 4905000 2594400 2310600 2966 2160 3292 7456;7457 6893 6893 4300 1 KSEPLDESDNDF TKPNRRVRKSEPLDES LDESDNDF________ R K S D F - 0 0 1 3 0 0 2 0 0 0 1 1 0 1 1 2 0 0 0 0 0 0 12 1 1394.5838 J3KNW5;Q96AJ1 J3KNW5 421 432 CLUAP1 Clusterin-associated protein 1 yes no 2 5.9141E-10 148.18 By MS/MS By MS/MS 1 1 32259000 18625000 13633000 2967 1228 3293 7458;7459 6894;6895 6894 2222 2 KSFSKEELMSSDLEETAGSTSIPK SFSKPKKKKSFSKEEL AGSTSIPKRKKSTPKE K K S P K R 1 0 0 1 0 0 4 1 0 1 2 3 1 1 1 6 2 0 0 0 0 0 24 2 2600.2527 O00567 O00567 510 533 NOP56 Nucleolar protein 56 yes yes 3 2.1766E-09 88.413 By MS/MS By MS/MS 1 1 47882000 28194000 19687000 2968 1338 3294 7460;7461 6896;6897 6897 2411;2412;2416 2 KSLDSDESEDEEDDYQQK AGDPKKEKKSLDSDES EEDDYQQKRKGVEGLI K K S Q K R 0 0 0 5 0 2 4 0 0 0 1 2 0 0 0 3 0 0 1 0 0 0 18 1 2158.8662 Q13442 Q13442 56 73 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 3 0.003808 90.884 By MS/MS 1 0 0 0 2969 1916 3295 7462 6898 6898 3691;3692 1 KSLSDSESDDSK KEKDGTKRKSLSDSES DSESDDSKSKKKRDAA R K S S K S 0 0 0 3 0 0 1 0 0 0 1 2 0 0 0 5 0 0 0 0 0 0 12 1 1296.5681 Q13185;S4R2Y4 Q13185 92 103 CBX3 Chromobox protein homolog 3 yes no 2 4.8032E-10 149.6 By MS/MS By MS/MS 2 1 35697000 17289000 18409000 2970 1902 3296 7463;7464;7465 6899;6900;6901;6902 6899 3637 4 KSMSLDMGQPSQANTK GQTSPRARKSMSLDMG QPSQANTKKLLGTRKS R K S T K K 1 0 1 1 0 2 0 1 0 0 1 2 2 0 1 3 1 0 0 0 0 0 16 1 1721.8077 J3QSG6;H0Y465;P21359 J3QSG6 315 330 NF1 Neurofibromin;Neurofibromin truncated yes no 2 0.00022984 106.93 By MS/MS By matching 1 1 10128000 6148900 3979200 2971 1016 3297 7466;7467 6903 6903 1879;1880 1 KSPATPQAKPDGVTATAADEEEDEYSGGLC VPGGGIKKKSPATPQA DEYSGGLC________ K K S L C - 5 0 0 3 1 1 4 3 0 0 1 2 0 0 3 2 3 0 1 1 0 0 30 2 3093.3721 Q99747 Q99747 283 312 NAPG Gamma-soluble NSF attachment protein yes yes 3 9.0731E-07 71.678 By MS/MS By MS/MS 1 1 23948000 11171000 12777000 2972 2558 3298 7468;7469 6904;6905 6904 7864 2 KSPRPAGPQLFLPDPDPQR EETAVSPRKSPRPAGP LPDPDPQRGGPGPGVR R K S Q R G 1 2 0 2 0 2 0 1 0 0 2 1 0 1 6 1 0 0 0 0 0 0 19 2 2115.1225 Q9BUH6 Q9BUH6 151 169 C9orf142 Protein PAXX yes yes 3 0.0013389 69.704 By matching By MS/MS 1 1 8873600 4874300 3999400 2973 2584 3299 7470;7471 6906 6906 5223 1 KSPSDTEGLVK SPVKQAPRKSPSDTEG SDTEGLVKSLPSGSHQ R K S V K S 0 0 0 1 0 0 1 1 0 0 1 2 0 0 1 2 1 0 0 1 0 0 11 1 1159.6085 O95297 O95297 218 228 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.0010953 108.23 By MS/MS 1 43134000 0 43134000 2974 1485 3300 7472 6907 6907 2751 1 KSPSGPVKSPPLSPVGTTPVK QNHDLTHRKSPSGPVK PVGTTPVKLKRAAPKE R K S V K L 0 0 0 0 0 0 0 2 0 0 1 3 0 0 6 4 2 0 0 3 0 0 21 2 2059.1677 C9J4K0;Q9BVC5 C9J4K0 139 159 C2orf49 Ashwin yes no 3 0.002278 64.305 By matching By MS/MS 2 2 123830000 60708000 63121000 2975 562 3301;3302 7473;7474;7475;7476 6908;6909 6908 1033;1034;1035 2 KSPVFSDEDSDLDFDISKLEQQSK NSSKSDLRKSPVFSDE SKLEQQSKVQNKGQGK R K S S K V 0 0 0 5 0 2 2 0 0 1 2 3 0 2 1 5 0 0 0 1 0 0 24 2 2756.3028 U3KQ48;O00566 U3KQ48 162 185 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes no 3 1.4568E-19 112.57 By MS/MS By matching 1 1 97210000 56729000 40481000 2976 1337 3303 7477;7478 6910 6910 2408;2409;2410 1 KSQAMSKSVTLR QWLEIHKKKSQAMSKS MSKSVTLRAKAMDPHK K K S L R A 1 1 0 0 0 1 0 0 0 0 1 2 1 0 0 3 1 0 0 1 0 0 12 2 1334.734 Q96MY7;H0YJ62 Q96MY7 489 500 FAM161B Protein FAM161B yes no 2 0.018964 51.445 By MS/MS 1 0 0 0 2977 2517 3304 7479 6911 6911 5082;5083 1 KSSADTEFSDECTTAER SWRSNNSRKSSADTEF DECTTAERVLMKSPSP R K S E R V 2 1 0 2 1 0 3 0 0 0 0 1 0 1 0 3 3 0 0 0 0 0 17 1 1932.8007 Q9H6S0 Q9H6S0 1200 1216 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2;3 6.2057E-18 137.86 By MS/MS By MS/MS 2 2 124780000 60201000 64579000 2978 2669 3305 7480;7481;7482;7483 6912;6913;6914 6914 5446;5447 3 KSSAQGKPLALK AALTECHRKSSAQGKP QGKPLALKVFVAGRNR R K S L K V 2 0 0 0 0 1 0 1 0 0 2 3 0 0 1 2 0 0 0 0 0 0 12 2 1226.7347 P46060 P46060 172 183 RANGAP1 Ran GTPase-activating protein 1 yes yes 2 0.005728 81.92 By MS/MS 1 166410000 166410000 0 2979 1706 3306 7484 6915 6915 3153 1 KSSGFLNLIK EKKKRDSRKSSGFLNL SGFLNLIKSRSKSERP R K S I K S 0 0 1 0 0 0 0 1 0 1 2 2 0 1 0 2 0 0 0 0 0 0 10 1 1105.6495 Q5VZK9;A0A0U1RQQ1 Q5VZK9 1066 1075 LRRC16A Leucine-rich repeat-containing protein 16A yes no 2 6.2043E-05 134.75 By MS/MS By MS/MS 1 1 6730300 4319700 2410600 2980 2124 3307 7485;7486 6916;6917 6917 4219 2 KSSLVTSK TPQDLPQRKSSLVTSK KSSLVTSKLAGGQVE_ R K S S K L 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 3 1 0 0 1 0 0 8 1 848.49673 O43768;A6NMQ3;Q5T5H1 O43768 107 114 ENSA Alpha-endosulfine yes no 2 0.010738 133.42 By MS/MS By MS/MS 2 2 74346000 42817000 31528000 2981 1394 3308 7487;7488;7489;7490 6918;6919;6920 6920 2559;2560 3 KSSLVTSKLAGGQVE TPQDLPQRKSSLVTSK KLAGGQVE________ R K S V E - 1 0 0 0 0 1 1 2 0 0 2 2 0 0 0 3 1 0 0 2 0 0 15 2 1502.8304 O43768 O43768 107 121 ENSA Alpha-endosulfine yes yes 3 0.0027534 66.606 By MS/MS By MS/MS 1 1 11825000 6352200 5472500 2982 1394 3309 7491;7492 6921;6922 6922 2559;2560 2 KSSPEMEDAR EKQKPEVKKSSPEMED SPEMEDARVLSKKQPD K K S A R V 1 1 0 1 0 0 2 0 0 0 0 1 1 0 1 2 0 0 0 0 0 0 10 1 1148.5132 Q96T58 Q96T58 1004 1013 SPEN Msx2-interacting protein yes yes 2 0.018134 69.815 By MS/MS By MS/MS 2 3 12560000 4528400 8031400 2983 2545 3310;3311 7493;7494;7495;7496;7497 6923;6924;6925 6925 5145 3 KSSPQSTDTAMDLLK ESSQKKKKKSSPQSTD DTAMDLLKAITSPLAA K K S L K A 1 0 0 2 0 1 0 0 0 0 2 2 1 0 1 3 2 0 0 0 0 0 15 1 1620.8029 Q9UGU5 Q9UGU5 100 114 HMGXB4 HMG domain-containing protein 4 yes yes 2 0.011527 65.179 By MS/MS 1 4335100 0 4335100 2984 2811 3312 7498 6926 6926 5765 1 KSSPSVKPAVDPAAAK QLKLSITKKSSPSVKP AVDPAAAKLWTLSAND K K S A K L 4 0 0 1 0 0 0 0 0 0 0 3 0 0 3 3 0 0 0 2 0 0 16 2 1551.8621 H3BV90;Q6FI81;H3BPG7;H3BT65 H3BV90 181 196 CIAPIN1 Anamorsin yes no 3 0.00083446 77.357 By MS/MS By MS/MS 1 1 29853000 14406000 15447000 2985 1146 3313 7499;7500 6927;6928 6928 2089;2090 2 KSSSGPVWSGASSACTSPAVGK GSTSNLARKSSSGPVW CTSPAVGKAKSSEFAS R K S G K A 3 0 0 0 1 0 0 3 0 0 0 2 0 0 2 7 1 1 0 2 0 0 22 1 2107.0004 Q9NYZ3 Q9NYZ3 310 331 GTSE1 G2 and S phase-expressed protein 1 yes yes 3 1.5087E-06 83.723 By matching By MS/MS 1 1 11020000 6623000 4397000 2986 2762 3314 7501;7502 6929 6929 5671 1 KSTYFSDEEELSD DSRRPRIKKSTYFSDE SDEEELSD________ K K S S D - 0 0 0 2 0 0 3 0 0 0 1 1 0 1 0 3 1 0 1 0 0 0 13 1 1548.6468 G3V1V1;Q8TBF4 G3V1V1 164 176 ZCRB1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 yes no 2 0.014086 76.156 By MS/MS By MS/MS 1 2 17947000 8355200 9592300 2987 963 3315 7503;7504;7505 6930;6931 6931 1755;1756 2 KSWNFMDLK K S L K 0 0 1 1 0 0 0 0 0 0 1 2 1 1 0 1 0 1 0 0 0 0 9 1 1167.5747 REV__Q96RY7 yes yes 2 0.0096974 63.565 By MS/MS By matching 1 1 6699500 3494400 3205200 + 2988 3010 3316 7506;7507 6932 6932 1 KTAHNSEAADLEESFNEHELEPSSPK MVYCRKHKKTAHNSEA ELEPSSPKSKKKSRKG K K T P K S 3 0 2 1 0 0 6 0 2 0 2 2 0 1 2 4 1 0 0 0 0 0 26 1 2895.3159 Q5JRC6;A0A0D9SGE8 Q5JRC6 133 158 PHF6 yes no 4 6.216E-08 81.312 By MS/MS By MS/MS 1 1 11582000 4895200 6686300 2989 319 3317 7508;7509 6933;6934;6935;6936 6934 582;583;584 4 KTAHNSEADLEESFNEHELEPSSPK MVYCRKHKKTAHNSEA ELEPSSPKSKKKSRKG K K T P K S 2 0 2 1 0 0 6 0 2 0 2 2 0 1 2 4 1 0 0 0 0 0 25 1 2824.2788 Q8IWS0 Q8IWS0 133 157 PHF6 PHD finger protein 6 yes yes 4 4.8671E-07 82.593 By MS/MS By MS/MS 1 1 66107000 33204000 32903000 2990 2271 3318 7510;7511 6937;6938 6937 4563;4564;4565 2 KTAHNSEADLEESFNEHELEPSSPKSK MVYCRKHKKTAHNSEA EPSSPKSKKKSRKGRP K K T S K K 2 0 2 1 0 0 6 0 2 0 2 3 0 1 2 5 1 0 0 0 0 0 27 2 3039.4058 Q8IWS0 Q8IWS0 133 159 PHF6 PHD finger protein 6 yes yes 4;5 7.4471E-06 70.345 By MS/MS By MS/MS 2 2 38707000 24375000 14332000 2991 2271 3319 7512;7513;7514;7515 6939;6940 6940 4563;4564;4565;4566 2 KTAPTLSPEHWK KSGPPELRKTAPTLSP TLSPEHWKAVPPVSPE R K T W K A 1 0 0 0 0 0 1 0 1 0 1 2 0 0 2 1 2 1 0 0 0 0 12 1 1393.7354 Q96JM3 Q96JM3 399 410 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 0.012617 73.91 By MS/MS By MS/MS 2 2 36281000 19042000 17240000 2992 2509 3320 7516;7517;7518;7519 6941;6942;6943 6943 5061 3 KTDKSILVSPTGPSR RNMTAEFKKTDKSILV VSPTGPSRVAFDPEQK K K T S R V 0 1 0 1 0 0 0 1 0 1 1 2 0 0 2 3 2 0 0 1 0 0 15 2 1584.8835 Q14684 Q14684 698 712 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 3 0.01219 56.553 By matching By MS/MS 1 1 3722800 1434900 2287900 2993 1955 3321 7520;7521 6944 6944 3791;3792 1 KTEDTYFISSAGKPTPGTQGK EFLRPGPRKTEDTYFI PTPGTQGKIKLVKESS R K T G K I 1 0 0 1 0 1 1 3 0 1 0 3 0 1 2 2 4 0 1 0 0 0 21 2 2212.1012 Q3V6T2;H0Y7K3;H0Y470;H7C2C6;H0Y7U8 Q3V6T2 1760 1780 CCDC88A Girdin yes no 3 0.00058423 78.554 By MS/MS 1 0 0 0 2994 2040 3322 7522 6945 6945 6856 1 KTGSPEIK VPQTVIPKKTGSPEIK KTGSPEIKLKITKTIQ K K T I K L 0 0 0 0 0 0 1 1 0 1 0 2 0 0 1 1 1 0 0 0 0 0 8 1 858.48108 Q9BZ95;E9PKA2 Q9BZ95 147 154 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes no 2 0.014657 72.289 By MS/MS 1 0 0 0 2995 2609 3323 7523 6946 6946 5282 1 KTGSYGALAEITASK ATWRLGLRKTGSYGAL LAEITASKEGQKEKDT R K T S K E 3 0 0 0 0 0 1 2 0 1 1 2 0 0 0 2 2 0 1 0 0 0 15 1 1495.7882 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 442 456 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2;3 1.2351E-35 171.85 By MS/MS By MS/MS 2 2 79153000 41222000 37931000 2996 1349 3324 7524;7525;7526;7527 6947;6948;6949 6949 2457;6593 3 KTPEGRASPAPGSGHPEGPGAHLDMNSLDR GLKRNSERKTPEGRAS LDMNSLDRAQAAKNKG R K T D R A 3 2 1 2 0 0 2 5 2 0 2 1 1 0 5 3 1 0 0 0 0 0 30 2 3037.4424 O94826 O94826 84 113 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 4 0.0055053 44.6 By MS/MS 1 15382000 0 15382000 2997 1465 3325 7528 6950 6950 2717 1 KTPLALAGSPTPK PPSSPLLKKTPLALAG LAGSPTPKNPEDKSPQ K K T P K N 2 0 0 0 0 0 0 1 0 0 2 2 0 0 3 1 2 0 0 0 0 0 13 1 1279.75 B9EGQ5;M0QXA7;O95785 B9EGQ5 169 181 WIZ Protein Wiz yes no 2 0.0177 74.338 By MS/MS By MS/MS 1 1 20739000 11286000 9453400 2998 538 3326 7529;7530 6951;6952 6952 982 2 KTPQGPPEIYSDTQFPSLQSTAK GARLTTTRKTPQGPPE PSLQSTAKHVESRKDK R K T A K H 1 0 0 1 0 3 1 1 0 1 1 2 0 1 4 3 3 0 1 0 0 0 23 1 2519.2544 Q9UKY7;H0Y8K3;D6R9V8;D6RFH2;D6RDN0 Q9UKY7 181 203 CDV3 Protein CDV3 homolog yes no 3 2.4809E-83 178.45 By MS/MS By MS/MS 1 1 491070000 281280000 209790000 2999 2839 3327 7531;7532 6953;6954 6953 7939 2 KTQMAEVLPSPR KGGKAKGKKTQMAEVL AEVLPSPRGQRVIPRI K K T P R G 1 1 0 0 0 1 1 0 0 0 1 1 1 0 2 1 1 0 0 1 0 0 12 1 1355.7231 P11388 P11388 1204 1215 TOP2A DNA topoisomerase 2-alpha yes yes 2 1.5739E-08 134.14 By MS/MS By MS/MS 1 1 13983000 6676000 7307500 3000 1565 3328 7533;7534 6955;6956;6957;6958 6956 2878 4 KTQQLHPVLQKPSVFGNDSDDDDETSVSESLQR QYGLILPKKTQQLHPV SVSESLQREAAKKQAM K K T Q R E 0 1 1 5 0 4 2 1 1 0 3 2 0 1 2 5 2 0 0 3 0 0 33 2 3698.766 Q9H0G5 Q9H0G5 15 47 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 4 2.5027E-32 110.62 By MS/MS By MS/MS 1 1 73746000 42896000 30850000 3001 2627 3329 7535;7536 6959;6960 6960 5339 2 KTSASDVTNIYPGDAGK KKARDEGKKTSASDVT IYPGDAGKAGDQLVPD K K T G K A 2 0 1 2 0 0 0 2 0 1 0 2 0 0 1 2 2 0 1 1 0 0 17 1 1722.8424 Q15042 Q15042 535 551 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2;3 0.015287 61.532 By MS/MS By matching 2 2 19275000 10142000 9133300 3002 1971 3330 7537;7538;7539;7540 6961;6962 6962 3841 1 KTSAVSSPLLDQQR SSASKKDRKTSAVSSP SPLLDQQRNSKTNQSK R K T Q R N 1 1 0 1 0 2 0 0 0 0 2 1 0 0 1 3 1 0 0 1 0 0 14 1 1528.8209 Q5T200;A0A087WX14 Q5T200 236 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.0017875 97.073 By matching By MS/MS 1 1 14181000 7953000 6227600 3003 2094 3331 7541;7542 6963 6963 4132 1 KTSDANETEDHLESLICK GGQPHKRRKTSDANET HLESLICKVGEKSACS R K T C K V 1 0 1 2 1 0 3 0 1 1 2 2 0 0 0 2 2 0 0 0 0 0 18 1 2088.9634 F2Z2T1;Q09161 F2Z2T1 20 37 NCBP1 Nuclear cap-binding protein subunit 1 yes no 3 1.2501E-13 120.99 By MS/MS By MS/MS 1 1 287620000 160280000 127340000 3004 849 3332 7543;7544 6964;6965 6965 1533;6457 2 KTSDANETEDHLESLICKVGEK GGQPHKRRKTSDANET LICKVGEKSACSLESN R K T E K S 1 0 1 2 1 0 4 1 1 1 2 3 0 0 0 2 2 0 0 1 0 0 22 2 2502.1908 F2Z2T1;Q09161 F2Z2T1 20 41 NCBP1 Nuclear cap-binding protein subunit 1 yes no 4 0.00010056 72.585 By MS/MS By MS/MS 1 1 14952000 5788800 9163300 3005 849 3333 7545;7546 6966;6967 6966 1533;6457 2 KTSFDQDSDVDIFPSDFPTEPPSLPR KTTSKKPKKTSFDQDS TEPPSLPRTGRARKEV K K T P R T 0 1 0 5 0 1 1 0 0 1 1 1 0 3 5 4 2 0 0 1 0 0 26 1 2936.3716 Q02880 Q02880 1574 1599 TOP2B DNA topoisomerase 2-beta yes yes 3;4 3.6824E-27 114.88 By MS/MS By MS/MS 3 3 1298200000 856590000 441650000 3006 1842 3334;3335 7547;7548;7549;7550;7551;7552 6968;6969;6970;6971;6972;6973;6974;6975 6972 3450;6763 8 KTSLDVSNSAEPGFLAPGAR PVKPVNGRKTSLDVSN GFLAPGARSNIQYRSL R K T A R S 3 1 1 1 0 0 1 2 0 0 2 1 0 1 2 3 1 0 0 1 0 0 20 1 2016.0276 A0A0A0MRJ3;Q8NEY1;H0Y6F6 Q8NEY1 659 678 NAV1 Neuron navigator 1 no no 2;3 4.2817E-06 83.891 By MS/MS By MS/MS 2 2 17544000 10220000 7324100 3007 188;2350 3336 7553;7554;7555;7556 6976;6977;6978 6976 332;6269 3 KTSPASLDFPESQK WKLSPDQRKTSPASLD LDFPESQKSSRGGSPD R K T Q K S 1 0 0 1 0 1 1 0 0 0 1 2 0 1 2 3 1 0 0 0 0 0 14 1 1533.7675 Q96JM3 Q96JM3 457 470 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 0.0011505 76.068 By MS/MS By MS/MS 2 2 46013000 23793000 22221000 3008 2509 3337 7557;7558;7559;7560 6979;6980;6981 6980 5062;7006 3 KTSSDDESEEDEDDLLQR AWAETTKRKTSSDDES DEDDLLQRTGNFISTS R K T Q R T 0 1 0 5 0 1 4 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 18 1 2109.8822 Q9Y5J1 Q9Y5J1 203 220 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 2 0.0037748 94.188 By MS/MS 1 0 0 0 3009 2929 3338 7561 6982 6982 6084;6085;6086;7131 1 KTSSDDESEEDEDDLLQRTGNFISTSTSLPR AWAETTKRKTSSDDES STSTSLPRGILKMKNC R K T P R G 0 2 1 5 0 1 4 1 0 1 3 1 0 1 1 6 4 0 0 0 0 0 31 2 3471.5761 Q9Y5J1 Q9Y5J1 203 233 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 3;4 0.0012483 51.393 By MS/MS By matching 2 2 70959000 51544000 19415000 3010 2929 3339 7562;7563;7564;7565 6983;6984 6984 6084;6085;6086;7131;7132 2 KTVEDEDQDSEEEKDNDSYIK SVNDKNLKKTVEDEDQ KDNDSYIKERSDIPSG K K T I K E 0 0 1 5 0 1 5 0 0 1 0 3 0 0 0 2 1 0 1 1 0 0 21 2 2515.0722 Q9Y5T5 Q9Y5T5 406 426 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 3 0.0025301 60.669 By MS/MS By matching 1 1 12652000 6537400 6114400 3011 2936 3340 7566;7567 6985 6985 6101 1 KTVFPGAVPVLPASPPPKDSLR LIPPSKRKKTVFPGAV PPPKDSLRSTPSHGSV K K T L R S 2 1 0 1 0 0 0 1 0 0 2 2 0 1 6 2 1 0 0 3 0 0 22 2 2272.2943 M0R165;Q9UBC2;M0R2S2 M0R165 216 237 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 3 1.256E-05 80.359 By MS/MS By MS/MS 1 1 8346300 4078000 4268300 3012 1319 3341 7568;7569 6986;6987 6986 2374 2 KTVFSPTLPAAR TNDQGARRKTVFSPTL SPTLPAARSSLGSLQT R K T A R S 2 1 0 0 0 0 0 0 0 0 1 1 0 1 2 1 2 0 0 1 0 0 12 1 1286.7347 C9J6P4;Q7Z2W4 C9J6P4 374 385 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0051761 89.136 By MS/MS By MS/MS 1 1 5844200 3110000 2734200 3013 565 3342 7570;7571 6988;6989 6989 1040 2 KTVTYEDPQAVGGLASALDNR GNSLAEQRKTVTYEDP LASALDNRKQSSEGTF R K T N R K 3 1 1 2 0 1 1 2 0 0 2 1 0 0 1 1 2 0 1 2 0 0 21 1 2204.1073 F5H3S6;B7Z2U2;Q6ZVM7 F5H3S6 252 272 TOM1L2 TOM1-like protein 2 yes no 3 1.0469E-34 139.7 By MS/MS By MS/MS 1 1 26733000 15411000 11322000 3014 512 3343 7572;7573 6990;6991 6990 6357;6358;7298 2 KTVTYEDPQAVGGLASALDNRK GNSLAEQRKTVTYEDP ASALDNRKQSSEGTFL R K T R K Q 3 1 1 2 0 1 1 2 0 0 2 2 0 0 1 1 2 0 1 2 0 0 22 2 2332.2023 F5H3S6;B7Z2U2;Q6ZVM7 F5H3S6 252 273 TOM1L2 TOM1-like protein 2 yes no 3 1.7624E-11 108.99 By MS/MS By MS/MS 1 1 11784000 6819200 4964400 3015 512 3344 7574;7575 6992;6993 6992 6357;6358;7298 2 KVAGAATPKK AGAAKKPKKVAGAATP AGAATPKKSIKKTPKK K K V K K S 3 0 0 0 0 0 0 1 0 0 0 3 0 0 1 0 1 0 0 1 0 0 10 2 969.59712 P16402 P16402 141 150 HIST1H1D Histone H1.3 yes yes 2 0.0044096 91.093 By MS/MS By MS/MS 1 2 10548000 4483400 6064900 3016 1586 3345 7576;7577;7578 6994;6995 6995 6675 2 KVDEGAGDSAAVASGGAQTLALAGSPAPSGHPK ADKVRKRRKVDEGAGD PAPSGHPKAGHSENGV R K V P K A 8 0 0 2 0 1 1 6 1 0 2 2 0 0 3 4 1 0 0 2 0 0 33 1 2973.4792 A0A0A0MRN5;Q9NZT2 A0A0A0MRN5 408 440 OGFR Opioid growth factor receptor yes no 3 0.0010283 49.209 By MS/MS By MS/MS 1 1 8738900 4635700 4103100 3017 194 3346 7579;7580 6996;6997 6997 348 2 KVEEEQEADEEDVSEEEAESK SESAQPLKKVEEEQEA SEEEAESKEGTNKDFP K K V S K E 2 0 0 2 0 1 10 0 0 0 0 2 0 0 0 2 0 0 0 2 0 0 21 1 2437.014 Q9H3N1 Q9H3N1 234 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2;3 1.1697E-43 149.09 By MS/MS By MS/MS 2 2 827670000 400410000 427260000 3018 2653 3347 7581;7582;7583;7584 6998;6999;7000;7001 6999 5408 4 KVELSESEEDKGGK PSPAPKPRKVELSESE SEEDKGGKMAAADSVQ R K V G K M 0 0 0 1 0 0 4 2 0 0 1 3 0 0 0 2 0 0 0 1 0 0 14 2 1533.7522 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 454 467 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2;3 0.00014811 110.37 By MS/MS By MS/MS 2 2 127380000 67632000 59751000 3019 442;1311 3348;3349 7585;7586;7587;7588 7002;7003;7004 7002 843;844 3 KVEPVPVTKQPTPPSEAAASK DASKIPGKKVEPVPVT PSEAAASKKKPGQKKS K K V S K K 3 0 0 0 0 1 2 0 0 0 0 3 0 0 5 2 2 0 0 3 0 0 21 2 2160.179 Q86UP2 Q86UP2 142 162 KTN1 Kinectin yes yes 3 0.0024215 61.167 By MS/MS By matching 1 1 24657000 14568000 10089000 3020 2236 3350 7589;7590 7005 7005 4480;6940 1 KVIYSQPSAR TKKGTSSKKVIYSQPS IYSQPSARSEGEFKQT K K V A R S 1 1 0 0 0 1 0 0 0 1 0 1 0 0 1 2 0 0 1 1 0 0 10 1 1147.635 A0A087WY82;Q9Y624 A0A087WY82 257 266 F11R Junctional adhesion molecule A yes no 2 0.018354 79.148 By matching By MS/MS 1 1 6566600 3084700 3481800 3021 96 3351 7591;7592 7006 7006 178;7165 1 KVLSDSEDEEKDADVPGTSTR PLYNSMKKKVLSDSED DVPGTSTRKRKDHQPR K K V T R K 1 1 0 4 0 0 3 1 0 0 1 2 0 0 1 3 2 0 0 2 0 0 21 2 2277.0608 Q8WWQ0 Q8WWQ0 1278 1298 PHIP PH-interacting protein yes yes 3 0.0035421 59.893 By MS/MS By matching 1 1 112700000 53028000 59671000 3022 2410 3352 7593;7594 7007 7007 4834;4835 1 KVLSPTAAKPSPFEGK GIKIKKKKKVLSPTAA KPSPFEGKTSTEPSTA K K V G K T 2 0 0 0 0 0 1 1 0 0 1 3 0 1 3 2 1 0 0 1 0 0 16 2 1655.9247 Q96QC0 Q96QC0 310 325 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 2;3 1.8318E-06 115.58 By MS/MS By MS/MS 2 2 45318000 23676000 21642000 3023 2529 3353 7595;7596;7597;7598 7008;7009;7010;7011;7012 7011 5104 5 KVMDSDEDDDY TTVKFNRRKVMDSDED DSDEDDDY________ R K V D Y - 0 0 0 5 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 11 1 1330.4871 K7EQA1;O14737 K7EQA1 77 87 PDCD5 Programmed cell death protein 5 yes no 2 4.5875E-20 163.71 By MS/MS By MS/MS 8 7 1330400000 705980000 624400000 3024 1285 3354;3355;3356 7599;7600;7601;7602;7603;7604;7605;7606;7607;7608;7609;7610;7611;7612;7613 7013;7014;7015;7016;7017;7018;7019;7020;7021;7022;7023;7024;7025;7026;7027;7028;7029;7030;7031;7032;7033;7034;7035 7035 143 2317;7486 22 KVPSFTFTPTVTYQR TSTYAGIRKVPSFTFT TPTVTYQRGGEAVSSG R K V Q R G 0 1 0 0 0 1 0 0 0 0 0 1 0 2 2 1 4 0 1 2 0 0 15 1 1770.9305 A0A0A0MSX4;Q9Y6N7 A0A0A0MSX4 817 831 ROBO1 Roundabout homolog 1 yes no 2;3 0.00078454 85.163 By matching By MS/MS 2 2 26604000 15825000 10779000 3025 228 3357 7614;7615;7616;7617 7036;7037 7037 419;6286;7205 2 KVQLTYYPHGVK GHFSGINRKVQLTYYP TYYPHGVKASNEGQDP R K V V K A 0 0 0 0 0 1 0 1 1 0 1 2 0 0 1 0 1 0 2 2 0 0 12 1 1431.7874 F8W9A8;B7WPL9;Q6PFW1 F8W9A8 489 500 PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 yes no 1 0.029249 31.494 By MS/MS 1 2832400 0 2832400 3026 511 3358 7618 7038 7038 1 KVQVAALQASPPLDQDDR AIVVKRPRKVQVAALQ PPLDQDDRAFEVMDEF R K V D R A 3 1 0 3 0 3 0 0 0 0 2 1 0 0 2 1 0 0 0 2 0 0 18 1 1950.0171 A0A1B0GTW1;Q9UDY2;B1AN86;U3KQJ2 A0A1B0GTW1 180 197 TJP2 Tight junction protein ZO-2 yes no 3 0.0045693 52.898 By MS/MS 1 2838100 2838100 0 3027 368 3359 7619 7039 7039 690 1 KVSGDSSHTETTAEEVPEDPLLK TLRVDRKRKVSGDSSH VPEDPLLKAKRRRVSK R K V L K A 1 0 0 2 0 0 4 1 1 0 2 2 0 0 2 3 3 0 0 2 0 0 23 1 2468.1918 H7BYY2;Q6W2J9;H7C2V9;A6NE70 H7BYY2 1137 1159 BCOR BCL-6 corepressor yes no 3 0.00015891 69.255 By MS/MS By MS/MS 1 1 22418000 13157000 9261300 3028 1155 3360 7620;7621 7040;7041 7040 2102;6545 2 KVSGVGGTTYEISV SPTRGGVKKVSGVGGT GTTYEISV________ K K V S V - 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 2 2 0 1 3 0 0 14 1 1395.7246 Q9C0B5;Q9ULC8 Q9C0B5 702 715 ZDHHC5;ZDHHC8 Palmitoyltransferase ZDHHC5;Probable palmitoyltransferase ZDHHC8 no no 2 2.5786E-13 139.31 By MS/MS By MS/MS 1 1 37988000 21046000 16942000 3029 2614;2840 3361 7622;7623 7042;7043 7042 7881 2 KVSIVSKPVLYR TSSLERGRKVSIVSKP VSKPVLYRTRCTRLGR R K V Y R T 0 1 0 0 0 0 0 0 0 1 1 2 0 0 1 2 0 0 1 3 0 0 12 2 1387.8551 Q9NRY4 Q9NRY4 1148 1159 ARHGAP35 Rho GTPase-activating protein 35 yes yes 3 0.021558 56.514 By MS/MS By matching 1 1 14641000 8931900 5708900 3030 2725 3362 7624;7625 7044 7044 1 KVSPIKINLK SSHILAERKVSPIKIN SPIKINLKNLRVTEAN R K V L K N 0 0 1 0 0 0 0 0 0 2 1 3 0 0 1 1 0 0 0 1 0 0 10 2 1138.7438 H0Y6F5;Q9H4I2 H0Y6F5 430 439 ZHX3 Zinc fingers and homeoboxes protein 3 yes no 3 0.019164 60.301 By matching By MS/MS 1 1 3334700 1367800 1966900 3031 1031 3363 7626;7627 7045 7045 1920 1 KVSSAEGAAKEEPK ________________ GAAKEEPKRRSARLSA R K V P K R 3 0 0 0 0 0 3 1 0 0 0 3 0 0 1 2 0 0 0 1 0 0 14 2 1429.7413 F2Z2W6;F2Z2Y5;H7BXJ5;P05114 F2Z2W6 5 18 HMGN1 Non-histone chromosomal protein HMG-14 yes no 2;3 4.6239E-14 139.39 By MS/MS By MS/MS 2 2 52068000 32030000 20039000 3032 851 3364 7628;7629;7630;7631 7046;7047;7048 7046 1538;1539 3 KVSYSHIQSK GKVQIVSKKVSYSHIQ SYSHIQSKCGSKDNIK K K V S K C 0 0 0 0 0 1 0 0 1 1 0 2 0 0 0 3 0 0 1 1 0 0 10 1 1175.6299 E7EVA0;P27816;H0Y2V1;F8W9U4 E7EVA0 2143 2152 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0026729 71.933 By MS/MS 1 3382700 3382700 0 3033 742 3365 7632 7049 7049 1346 1 KVTPIDSPPVWSPEGYMALQSK CVPPLQERKVTPIDSP GYMALQSKGYPLPHPK R K V S K G 1 0 0 1 0 1 1 1 0 1 1 2 1 0 4 3 1 1 1 2 0 0 22 1 2429.2301 Q5JSZ5;Q5JSZ9 Q5JSZ5 734 755 PRRC2B Protein PRRC2B yes no 3 0.00027569 66.906 By MS/MS By MS/MS 1 2 14000000 7100700 6899600 3034 2074 3366 7633;7634;7635 7050;7051 7050 4081 2 KVTSPLQSPTK RPHPPQLRKVTSPLQS SPLQSPTKAKPKVQED R K V T K A 0 0 0 0 0 1 0 0 0 0 1 2 0 0 2 2 2 0 0 1 0 0 11 1 1184.6765 H0YDE2;A0A1B0GTN9;E9PKC0;Q6IQ23;A0A1B0GUM1;A0A1B0GUN0 H0YDE2 531 541 PLEKHA7 Pleckstrin homology domain-containing family A member 7 yes no 2 3.1372E-05 137.73 By MS/MS 1 5070100 0 5070100 3035 365 3367 7636 7052 7052 678;679 1 KVVDYSQFQESDDADEDYGR MSRPVRNRKVVDYSQF DADEDYGRDSGPPTKK R K V G R D 1 1 0 5 0 2 2 1 0 0 0 1 0 1 0 2 0 0 2 2 0 0 20 1 2364.9982 Q9H1E3 Q9H1E3 9 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 5.1375E-68 178.03 By MS/MS By MS/MS 7 8 2886300000 1698500000 1187800000 3036 2637 3368 7637;7638;7639;7640;7641;7642;7643;7644;7645;7646;7647;7648;7649;7650;7651 7053;7054;7055;7056;7057;7058;7059;7060;7061;7062;7063;7064;7065;7066;7067;7068 7063 5375;5376;7886 16 KVVDYSQFQESDDADEDYGRDSGPPTK MSRPVRNRKVVDYSQF RDSGPPTKKIRSSPRE R K V T K K 1 1 0 6 0 2 2 2 0 0 0 2 0 1 2 3 1 0 2 2 0 0 27 2 3047.3268 Q9H1E3 Q9H1E3 9 35 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 4 3.8926E-08 80.835 By MS/MS By MS/MS 1 1 223850000 148300000 75548000 3037 2637 3369 7652;7653 7069;7070 7069 5375;5376;7886 2 KVVEAVNSDSDSEFGIPK PKRAPKQKKVVEAVNS DSEFGIPKKTTTPKGK K K V P K K 1 0 1 2 0 0 2 1 0 1 0 2 0 1 1 3 0 0 0 3 0 0 18 1 1919.9476 Q02880 Q02880 1515 1532 TOP2B DNA topoisomerase 2-beta yes yes 2;3 2.3668E-67 188.34 By MS/MS By MS/MS 3 3 278090000 162080000 116000000 3038 1842 3370;3371 7654;7655;7656;7657;7658;7659 7071;7072;7073;7074;7075;7076;7077;7078 7074 3451;3452;3453 8 KVVQSLEQTAR ARSPEEIRKVVQSLEQ QSLEQTAREILTLLQG R K V A R E 1 1 0 0 0 2 1 0 0 0 1 1 0 0 0 1 1 0 0 2 0 0 11 1 1257.7041 E9PGT1;Q15631;A0A0J9YVW2;H7C1D4 E9PGT1 21 31 TSN Translin no no 1 NaN 0 0 0 3039 795 0 KVVVSPTK KAAATSAKKVVVSPTK KVVVSPTKKVAVATPA K K V T K K 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 70 NCL Nucleolin yes no 2 0.012155 147.28 By MS/MS By MS/MS 1 1 308850000 159600000 149250000 3040 1604 3372 7660;7661 7079;7080 7080 2963 2 KVVVSPTKK KAAATSAKKVVVSPTK VVVSPTKKVAVATPAK K K V K K V 0 0 0 0 0 0 0 0 0 0 0 3 0 0 1 1 1 0 0 3 0 0 9 2 984.63317 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 71 NCL Nucleolin yes no 2;3 0.0007 155.33 By MS/MS By MS/MS 2 2 3385800000 1983500000 1402300000 3041 1604 3373 7662;7663;7664;7665 7081;7082;7083;7084 7081 2963 4 KVYEDSGIPLPAESPK QIKATVKRKVYEDSGI PLPAESPKKGPKKVAS R K V P K K 1 0 0 1 0 0 2 1 0 1 1 2 0 0 3 2 0 0 1 1 0 0 16 1 1728.8934 F8W038;F8W1H0;H0YIS7;Q8IXM2 F8W038 83 98 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 2 0.0087209 66.152 By MS/MS By MS/MS 1 1 9657000 5511000 4146000 3042 928 3374 7666;7667 7085;7086 7086 1667 2 KWDGSEEDEDNSK GKAQKSNKKWDGSEED EEDEDNSKKIKERSRI K K W S K K 0 0 1 3 0 0 3 1 0 0 0 2 0 0 0 2 0 1 0 0 0 0 13 1 1537.6169 A0A087WUT6;O60841 A0A087WUT6 160 172 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0035687 91.712 By MS/MS By MS/MS 1 2 31323000 10269000 21055000 3043 49 3375 7668;7669;7670 7087;7088 7088 83;84 1 KWSLNTYK MEKLELVRKWSLNTYK KWSLNTYKCTRQIISE R K W Y K C 0 0 1 0 0 0 0 0 0 0 1 2 0 0 0 1 1 1 1 0 0 0 8 1 1038.5498 P53367 P53367 130 137 ARFIP1 Arfaptin-1 yes yes 2 0.02898 82.494 By MS/MS By matching 1 1 129380000 63925000 65453000 3044 1760 3376 7671;7672 7089 7089 1 KYESDEDSLGSSGR HGHSYSNRKYESDEDS DSLGSSGRVCVEKWNL R K Y G R V 0 1 0 2 0 0 2 2 0 0 1 1 0 0 0 4 0 0 1 0 0 0 14 1 1528.6641 O00418 O00418 467 480 EEF2K Eukaryotic elongation factor 2 kinase yes yes 2 0.005788 78.249 By matching By MS/MS 1 1 10238000 3629200 6608400 3045 1332 3377 7673;7674 7090 7090 2400 1 KYGLFKEENPYAR TRHDEIRKKYGLFKEE KEENPYARFENN____ K K Y A R F 1 1 1 0 0 0 2 1 0 0 1 2 0 1 1 0 0 0 2 0 0 0 13 2 1613.8202 A8MXQ1;P53801 A8MXQ1 143 155 PTTG1IP Pituitary tumor-transforming gene 1 protein-interacting protein yes no 3 0.004181 62.732 By MS/MS By MS/MS 1 1 6295500 2880500 3414900 3046 440 3378 7675;7676 7091;7092 7092 7273;7274 2 KYQGLEIKSSDQPLTVPVSPK VHKANPIRKYQGLEIK LTVPVSPKFSTRFHC_ R K Y P K F 0 0 0 1 0 2 1 1 0 1 2 3 0 0 3 3 1 0 1 2 0 0 21 2 2313.258 Q9ULW0 Q9ULW0 720 740 TPX2 Targeting protein for Xklp2 yes yes 3 0.0097935 50.055 By matching By MS/MS 1 1 5457200 3236000 2221200 3047 2854 3379 7677;7678 7093 7093 5878 1 KYVISDEEEEDDD DKANKKHKKYVISDEE DEEEEDDD________ K K Y D D - 0 0 0 4 0 0 4 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 13 1 1584.6315 Q8WVC0 Q8WVC0 654 666 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 0.0091398 75.764 By MS/MS By MS/MS 1 1 322000000 176540000 145450000 3048 2403 3380 7679;7680 7094;7095 7094 4808 2 LAAAEETAVSPR RVWSLERRLAAAEETA EETAVSPRKSPRPAGP R L A P R K 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1213.6303 Q9BUH6 Q9BUH6 139 150 C9orf142 Protein PAXX yes yes 2 1.446E-48 195.94 By MS/MS By MS/MS 1 1 249030000 134840000 114190000 3049 2584 3381 7681;7682 7096;7097;7098 7096 5224 3 LAAEVYKDMPETSFTR GEDVENSRLAAEVYKD MPETSFTRTISNPEVV R L A T R T 2 1 0 1 0 0 2 0 0 0 1 1 1 1 1 1 2 0 1 1 0 0 16 1 1856.8978 A8MQ02;J3KN01;P55196;Q5TIG5;F8W9I4;E9PFY5 A8MQ02 157 172 MLLT4 Afadin yes no 2;3 4.3686E-05 106.6 By MS/MS By MS/MS 2 2 24267000 13712000 10555000 3050 431 3382 7683;7684;7685;7686 7099;7100;7101;7102;7103 7101 7268 5 LAAGRPFNTYPR AGLASGAKLAAGRPFN RPFNTYPRADTDHPSR K L A P R A 2 2 1 0 0 0 0 1 0 0 1 0 0 1 2 0 1 0 1 0 0 0 12 1 1361.7204 O96013 O96013 199 210 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 3 0.012857 59.198 By matching By MS/MS 1 1 7894500 4490600 3403900 3051 1506 3383 7687;7688 7104;7105 7105 2 LAALKDEPQTVPDVPSFGESPPLSPIDMDTQER PGALGPPRLAALKDEP IDMDTQERIKAERKRL R L A E R I 2 1 0 4 0 2 3 1 0 1 3 1 1 1 6 3 2 0 0 2 0 0 33 1 3578.745 P17535;U3KPR5 P17535 236 268 JUND Transcription factor jun-D yes no 3 0.00095777 52.669 By matching By MS/MS 1 1 25110000 18545000 6564700 3052 1595 3384 7689;7690 7106 7106 2926;2927 1 LAAMPDHTDVSLSPEER FTVNSLKKLAAMPDHT VSLSPEERVRALSKLG K L A E R V 2 1 0 2 0 0 2 0 1 0 2 0 1 0 2 2 1 0 0 1 0 0 17 0 1866.8782 Q96FJ0 Q96FJ0 13 29 STAMBPL1 AMSH-like protease yes yes 2 0.0085892 47.559 By MS/MS By matching 1 1 1110700000 551200000 559530000 3053 2484 3385 7691;7692 7107 7107 331 5009;5010;7002 1 LAAPSVSHVSPR QTSERANKLAAPSVSH SVSHVSPRKNPSVVIK K L A P R K 2 1 0 0 0 0 0 0 1 0 1 0 0 0 2 3 0 0 0 2 0 0 12 0 1219.6673 A0A0U1RRM7;A0A0U1RQW3;Q8WXE1 A0A0U1RRM7 122 133 ATRIP ATR-interacting protein yes no 2;3 0.0015021 88.282 By MS/MS By MS/MS 2 2 71623000 37566000 34057000 3054 344 3386 7693;7694;7695;7696 7108;7109;7110;7111 7109 636 4 LAAQLGAPTSPIPDSAIVNTR RALAAERRLAAQLGAP DSAIVNTRRCWSCGAS R L A T R R 4 1 1 1 0 1 0 1 0 2 2 0 0 0 3 2 2 0 0 1 0 0 21 0 2091.1324 B8ZZS4;Q9H8Y5 B8ZZS4 456 476 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes no 2;3 3.0478E-05 80.102 By MS/MS By MS/MS 2 2 21061000 11764000 9296400 3055 533 3387 7697;7698;7699;7700 7112;7113;7114 7113 971;6363 3 LAAQLGAPTSPIPDSAIVNTRR RALAAERRLAAQLGAP SAIVNTRRCWSCGASL R L A R R C 4 2 1 1 0 1 0 1 0 2 2 0 0 0 3 2 2 0 0 1 0 0 22 1 2247.2335 B8ZZS4;Q9H8Y5 B8ZZS4 456 477 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes no 3 0.0081197 47.618 By matching By MS/MS 1 1 8862600 5828000 3034600 3056 533 3388 7701;7702 7115 7115 971;6363 1 LAAVTYNGVDNNK YENYRSRKLAAVTYNG YNGVDNNKNKGQLTKS K L A N K N 2 0 3 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 1 2 0 0 13 0 1377.6888 G3V1Q4;E7ES33;E7EPK1;Q16181 G3V1Q4 278 290 SEPT7 Septin-7 yes no 2 0.0060414 66.19 By MS/MS By matching 1 1 6574500 3628100 2946400 3057 714 3389 7703;7704 7116 7116 7355 0 LACGVIGIAQ KTGNAGSRLACGVIGI CGVIGIAQ________ R L A A Q - 2 0 0 0 1 1 0 2 0 2 1 0 0 0 0 0 0 0 0 1 0 0 10 0 1000.5376 H7BYH4;P00441 H7BYH4 126 135 SOD1 Superoxide dismutase [Cu-Zn] yes no 2 9.331E-05 119.56 By MS/MS 1 1741800 0 1741800 3058 1152 3390 7705 7117 7117 1 LADAMAESPSRDVVGSGTELQR TEEGLRERLADAMAES GSGTELQREGSIETLS R L A Q R E 3 2 0 2 0 1 2 2 0 0 2 0 1 0 1 3 1 0 0 2 0 0 22 1 2288.1067 K7ESE9;Q9H6U6 K7ESE9 633 654 BCAS3 Breast carcinoma-amplified sequence 3 yes no 3 0.00091633 61.942 By MS/MS 1 7429900 7429900 0 3059 1292 3391 7706 7118 7118 2327 1 LADSGDGAGPSPEEKDFLK TRTSARRRLADSGDGA PEEKDFLKTVEGRELQ R L A L K T 2 0 0 3 0 0 2 3 0 0 2 2 0 1 2 2 0 0 0 0 0 0 19 1 1931.9113 Q92917 Q92917 32 50 GPKOW G patch domain and KOW motifs-containing protein yes yes 3 0.015022 47.223 By MS/MS By matching 1 1 8840500 4559600 4281000 3060 2447 3392 7707;7708 7119 7119 4924 1 LAEAPSPAPTPSPTPVEDLGPQTSTSPGRLSPDFAEELR GTRGPLERLAEAPSPA PDFAEELRSLEPSPSP R L A L R S 4 2 0 2 0 1 4 2 0 0 4 0 0 1 9 5 4 0 0 1 0 0 39 1 4013.9858 A0A0G2JMS7;A0A0G2JNZ2;Q14160;H0YCG0 A0A0G2JMS7 1455 1493 SCRIB Protein scribble homolog yes no 4 5.0157E-05 54.997 By MS/MS By matching 1 1 28995000 20575000 8420100 3061 322 3393 7709;7710 7120 7120 595 1 LAEDEGDSEPEAVGQSR KRKKFPDRLAEDEGDS PEAVGQSRGRRQKK__ R L A S R G 2 1 0 2 0 1 4 2 0 0 1 0 0 0 1 2 0 0 0 1 0 0 17 0 1787.781 Q9UIG0 Q9UIG0 1461 1477 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2;3 0.00017495 79.462 By MS/MS By MS/MS 2 2 171290000 80586000 90704000 3062 2817 3394 7711;7712;7713;7714 7121;7122;7123 7123 5789 3 LAELPAAAQPSAEDSDTEDDSEAEQTER KEGKYDLKLAELPAAA SEAEQTERNIHPTAMM K L A E R N 6 1 0 4 0 2 6 0 0 0 2 0 0 0 2 3 2 0 0 0 0 0 28 0 2974.2799 O95714 O95714 1928 1955 HERC2 E3 ubiquitin-protein ligase HERC2 yes yes 3 0.0001247 66.012 By MS/MS By MS/MS 1 1 13549000 6563800 6985400 3063 1499 3395 7715;7716 7124;7125;7126;7127;7128 7125 2782;6650 5 LAEPDIYQEK TSSGGQPRLAEPDIYQ EPDIYQEKLSQVRDVR R L A E K L 1 0 0 1 0 1 2 0 0 1 1 1 0 0 1 0 0 0 1 0 0 0 10 0 1204.5976 Q70EL1 Q70EL1 1227 1236 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 yes yes 2 0.010526 64.841 By matching By MS/MS 1 1 2120300 1465400 654880 3064 2191 3396 7717;7718 7129 7129 7765 1 LAEPDIYQEKLSQVR TSSGGQPRLAEPDIYQ QEKLSQVRDVRSKDLG R L A V R D 1 1 0 1 0 2 2 0 0 1 2 1 0 0 1 1 0 0 1 1 0 0 15 1 1787.9418 Q70EL1 Q70EL1 1227 1241 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 yes yes 3 0.00233 65.495 By MS/MS By MS/MS 1 1 6350800 2548700 3802200 3065 2191 3397 7719;7720 7130;7131 7131 4364;7765 2 LAEQFVLLNLVYETTDK AENKEIQKLAEQFVLL LVYETTDKHLSPDGQY K L A D K H 1 0 1 1 0 1 2 0 0 0 4 1 0 1 0 0 2 0 1 2 0 0 17 0 1995.0565 H7C3Z9;C9J3E2;B5MC07;O95994 H7C3Z9 30 46 AGR2 Anterior gradient protein 2 homolog yes no 2;3 2.3764E-12 129.11 By MS/MS By MS/MS 2 2 22086000 13023000 9062900 3066 502 3398 7721;7722;7723;7724 7132;7133;7134;7135 7135 4 LAERLSPFLAESK RQDRGPPRLAERLSPF SPFLAESKTKNAALQP R L A S K T 2 1 0 0 0 0 2 0 0 0 3 1 0 1 1 2 0 0 0 0 0 0 13 1 1459.8035 H9KVB4;O15417 H9KVB4 258 270 TNRC18 Trinucleotide repeat-containing gene 18 protein yes no 2 0.0019647 92.773 By MS/MS By MS/MS 1 1 5359200 2904900 2454300 3067 1192 3399 7725;7726 7136;7137 7136 2163 2 LAGTQPLEVLEAVQR KFVERTLRLAGTQPLE EVLEAVQRSLVLQRPQ R L A Q R S 2 1 0 0 0 2 2 1 0 0 3 0 0 0 1 0 1 0 0 2 0 0 15 0 1622.8992 P22314;Q5JRR6 P22314 679 693 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 0.017274 60.08 By MS/MS By matching 1 1 5403300 3300600 2102700 3068 1617 3400 7727;7728 7138 7138 0 LAIQGPEDSPSR RRAEGPPRLAIQGPED GPEDSPSRQSRRYDW_ R L A S R Q 1 1 0 1 0 1 1 1 0 1 1 0 0 0 2 2 0 0 0 0 0 0 12 0 1268.6361 Q15773 Q15773 230 241 MLF2 Myeloid leukemia factor 2 yes yes 2 5.2377E-09 130.66 By MS/MS By MS/MS 1 1 72893000 37843000 35049000 3069 2010 3401 7729;7730 7139;7140 7139 3919 2 LAIQGPEDSPSRQSR RRAEGPPRLAIQGPED DSPSRQSRRYDW____ R L A S R R 1 2 0 1 0 2 1 1 0 1 1 0 0 0 2 3 0 0 0 0 0 0 15 1 1639.8278 Q15773 Q15773 230 244 MLF2 Myeloid leukemia factor 2 yes yes 2;3 0.0021848 75.376 By MS/MS By MS/MS 2 2 64785000 32358000 32427000 3070 2010 3402 7731;7732;7733;7734 7141;7142;7143;7144 7143 3919 4 LAKHESQQDYSK VGFDYKEKLAKHESQQ ESQQDYSKGFGGKYGV K L A S K G 1 0 0 1 0 2 1 0 1 0 1 2 0 0 0 2 0 0 1 0 0 0 12 1 1432.6947 Q14247 Q14247 293 304 CTTN Src substrate cortactin yes yes 2 0.00025251 97.452 By MS/MS 1 1139300 0 1139300 3071 1945 3403 7735 7145 7145 7700 0 LALAGEGEACPLLGSPGAGR LADGAAVRLALAGEGE LGSPGAGRNSVLFLPV R L A G R N 4 1 0 0 1 0 2 5 0 0 4 0 0 0 2 1 0 0 0 0 0 0 20 0 1894.9571 Q96F46 Q96F46 694 713 IL17RA Interleukin-17 receptor A yes yes 2 0.004649 61.276 By MS/MS By matching 1 1 5481900 3019700 2462200 3072 2482 3404 7736;7737 7146 7146 5007 1 LALDGETLGEEEQEDEQPPWASPSPTSR AEAGAEARLALDGETL ASPSPTSRQSPASPPP R L A S R Q 2 1 0 2 0 2 6 2 0 0 3 0 0 0 4 3 2 1 0 0 0 0 28 0 3067.3894 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1335 1362 SCRIB Protein scribble homolog yes no 3 5.1962E-34 121.19 By MS/MS By MS/MS 1 1 54570000 29755000 24816000 3073 322 3405 7738;7739 7147;7148 7148 596;597 2 LALLGLAQPSEKPSSPSPDLPFTTPAPK FSTPPAQRLALLGLAQ PFTTPAPKKPGNPSRA R L A P K K 3 0 0 1 0 1 1 1 0 0 5 2 0 1 7 4 2 0 0 0 0 0 28 1 2858.543 A0A0C4DGU2;Q9Y4U1 A0A0C4DGU2 174 201 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes no 3 8.5662E-19 101.47 By MS/MS By MS/MS 1 1 150300000 88898000 61404000 3074 301 3406 7740;7741 7149;7150;7151 7151 541;542 3 LAPDYDALDVANK GEKKAYVRLAPDYDAL DALDVANKIGII____ R L A N K I 3 0 1 3 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 13 0 1403.6933 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 142 154 RPL23A 60S ribosomal protein L23a yes no 2 0.0078399 74.841 By MS/MS By matching 1 1 7548900 3430000 4118900 3075 433 3407 7742;7743 7152 7152 1 LAPEYEAAATR PWCGHCKRLAPEYEAA EYEAAATRLKGIVPLA R L A T R L 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 11 0 1190.5932 P30101;H7BZJ3 P30101 63 73 PDIA3 Protein disulfide-isomerase A3 no no 2 0.022704 66.962 By matching By MS/MS 1 1 4594300 2556700 2037600 3076 1653;1160 3408 7744;7745 7153 7153 1 LAPSPARPR VPASFFRRLAPSPARP APSPARPRHPAEAPNN R L A P R H 2 2 0 0 0 0 0 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 9 1 963.5614 O14654 O14654 436 444 IRS4 Insulin receptor substrate 4 yes yes 2 0.010001 78.513 By MS/MS By MS/MS 1 1 97534000 45026000 52508000 3077 1343 3409 7746;7747 7154;7155 7154 2441 2 LAPVPSPEPQKPAPVSPESVK VPVCESQKLAPVPSPE PVSPESVKATLSNPKP K L A V K A 2 0 0 0 0 1 2 0 0 0 1 2 0 0 7 3 0 0 0 3 0 0 21 1 2153.1732 Q96JM3 Q96JM3 199 219 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 1.3278E-09 101.92 By MS/MS By MS/MS 2 2 138800000 82303000 56496000 3078 2509 3410;3411 7748;7749;7750;7751 7156;7157;7158;7159 7159 5063;5064 4 LAQQQQQLYAPPPPAEQEEQALSPSPTNGNPLLPFPGAQVR RKKELLERLAQQQQQL PFPGAQVRQNVKNRLL R L A V R Q 5 1 2 0 0 8 3 2 0 0 5 0 0 1 9 2 1 0 1 1 0 0 41 0 4406.2295 Q96EV2;H0Y3K4 Q96EV2 827 867 RBM33 RNA-binding protein 33 yes no 4 0.00087582 44.903 By MS/MS 1 16402000 0 16402000 3079 2480 3412 7752 7160 7160 5003 1 LAQRLQEAEENTETANSK ELEEAKKKLAQRLQEA NTETANSKCASLEKTK K L A S K C 3 1 2 0 0 2 4 0 0 0 2 1 0 0 0 1 2 0 0 0 0 0 18 1 2030.9869 Q9UKX3 Q9UKX3 1397 1414 MYH13 Myosin-13 yes yes 2 0.014518 45.257 By MS/MS By matching 1 1 8255100 3796300 4458800 3080 2837 3413 7753;7754 7161 7161 5838 1 LAQYESKK AKRLREERLAQYESKK LAQYESKKAKKPALVA R L A K K A 1 0 0 0 0 1 1 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 8 1 965.5182 P24534 P24534 123 130 EEF1B2 Elongation factor 1-beta yes yes 2 0.029819 46.994 By matching By MS/MS 1 1 3733600 2679600 1054000 3081 1626 3414 7755;7756 7162 7162 7580 0 LARSSPEQPRPSTSK SEEGKEARLARSSPEQ QPRPSTSKAVSPPHLD R L A S K A 1 2 0 0 0 1 1 0 0 0 1 1 0 0 3 4 1 0 0 0 0 0 15 2 1639.8642 H3BRN3;H3BVD2;H3BUJ5;H3BT57;P29590 H3BRN3 51 65 PML Protein PML yes no 3 0.0018727 70.373 By matching By MS/MS 1 1 15362000 3113600 12248000 3082 1138 3415 7757;7758 7163 7163 2074;2075 1 LASDDRPSPPR HTSMDLPKLASDDRPS DDRPSPPRGLVAAYSG K L A P R G 1 2 0 2 0 0 0 0 0 0 1 0 0 0 3 2 0 0 0 0 0 0 11 1 1209.6102 A0A0A0MR66;P98175 A0A0A0MR66 781 791 RBM10 RNA-binding protein 10 yes no 2;3 0.00020706 108.9 By MS/MS By MS/MS 2 1 34008000 24711000 9297300 3083 172 3416 7759;7760;7761 7164;7165;7166;7167;7168 7164 307 5 LASELAKTPQK KHSEKMAKLASELAKT ELAKTPQKSVSFSLKN K L A Q K S 2 0 0 0 0 1 1 0 0 0 2 2 0 0 1 1 1 0 0 0 0 0 11 1 1184.6765 Q13416 Q13416 109 119 ORC2 Origin recognition complex subunit 2 yes yes 2;3 0.0025141 83.877 By MS/MS By MS/MS 2 2 21444000 10398000 11046000 3084 1913 3417 7762;7763;7764;7765 7169;7170 7170 6793 2 LASLGDTASPLVK SRQPTGHKLASLGDTA DTASPLVKSVSCDGAL K L A V K S 2 0 0 1 0 0 0 1 0 0 3 1 0 0 1 2 1 0 0 1 0 0 13 0 1270.7133 Q6P4F7 Q6P4F7 860 872 ARHGAP11A Rho GTPase-activating protein 11A yes yes 2 0.0017688 90.412 By MS/MS By matching 1 1 2940400 1665500 1274900 3085 2154 3418 7766;7767 7171 7171 4291 1 LASPELER SPDVGLLKLASPELER LASPELERLIIQSSNG K L A E R L 1 1 0 0 0 0 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 8 0 913.4869 P05412;P17535 P05412 71 78 JUN;JUND Transcription factor AP-1;Transcription factor jun-D no no 2 0.0086452 92.239 By MS/MS By MS/MS 1 1 163640000 88023000 75614000 3086 1525;1595 3419 7768;7769 7172;7173 7172 2811;2928 2 LASPMKPVPGTPPSSK RPPGGSDKLASPMKPV PGTPPSSKAKSPISSG K L A S K A 1 0 0 0 0 0 0 1 0 0 1 2 1 0 5 3 1 0 0 1 0 0 16 1 1592.8596 Q15648 Q15648 1205 1220 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.013024 62.468 By MS/MS By MS/MS 1 1 11013000 0 11013000 3087 1998 3420 7770;7771 7174;7175 7174 3900 1 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR GPGAEGPRLASPSGST DDSATICRVCQKPGDL R L A C R V 4 1 0 2 1 0 2 7 0 1 3 0 0 0 4 7 4 0 0 2 0 0 38 0 3557.6791 Q13263;M0R0K9 Q13263 592 629 TRIM28 Transcription intermediary factor 1-beta yes no 3;4 1.0901E-30 102.47 By MS/MS By MS/MS 3 3 513820000 308550000 205280000 3088 1908 3421;3422 7772;7773;7774;7775;7776;7777 7176;7177;7178 7178 3650 3 LASTNSSVLGADLPSSMK ETAKATPRLASTNSSV ADLPSSMKEKAKAETE R L A M K E 2 0 1 1 0 0 0 1 0 0 3 1 1 0 1 5 1 0 0 1 0 0 18 0 1776.8928 Q13428;J3KQ96;E7ETY2;H0YA99 Q13428 105 122 TCOF1 Treacle protein yes no 2 0.00076058 74.744 By MS/MS By matching 1 1 6192000 3108500 3083500 3089 1915 3423 7778;7779 7179 7179 3681 1 LASTSDIEEKENR VAPTIPRRLASTSDIE DIEEKENRDSSSLRTS R L A N R D 1 1 1 1 0 0 3 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 13 1 1490.7213 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 505 517 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2;3 2.6229E-10 136.6 By MS/MS By MS/MS 2 2 63959000 35451000 28508000 3090 1349 3424 7780;7781;7782;7783 7180;7181;7182;7183 7180 2458;6594 4 LATKLSSSLGR ALTGGPKRLATKLSSS KLSSSLGRSSGRRVRA R L A G R S 1 1 0 0 0 0 0 1 0 0 3 1 0 0 0 3 1 0 0 0 0 0 11 1 1131.6612 Q9BST9 Q9BST9 213 223 RTKN Rhotekin yes yes 2 0.0011008 104.41 By MS/MS By matching 1 1 15596000 9154600 6441600 3091 2575 3425 7784;7785 7184 7184 5201 1 LATKSSPVKVGEK SAMKVGEKLATKSSPV SPVKVGEKRKAADETL K L A E K R 1 0 0 0 0 0 1 1 0 0 1 3 0 0 1 2 1 0 0 2 0 0 13 2 1342.782 P49916 P49916 908 920 LIG3 DNA ligase 3 yes yes 2;3 0.004486 88.78 By MS/MS By MS/MS 2 2 30245000 16478000 13767000 3092 1735 3426 7786;7787;7788;7789 7185;7186;7187 7186 3285;3286 3 LATLSDQVNR EKRELEGKLATLSDQV TLSDQVNRRDFESEKR K L A N R R 1 1 1 1 0 1 0 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 10 0 1115.5935 A0A0D9SFK2;Q92614 A0A0D9SFK2 1635 1644 MYO18A Unconventional myosin-XVIIIa yes no 2 0.012533 90.601 By MS/MS 1 1114700 1114700 0 3093 315 3427 7790 7188 7188 574 0 LATNTSAPDLK STTPRLSRLATNTSAP NTSAPDLKNVRSKVGS R L A L K N 2 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1129.5979 E7EVA0;P27816;H0Y2V1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 2068 2078 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 7.5241E-06 124.38 By MS/MS By MS/MS 1 1 54996000 32495000 22501000 3094 742 3428 7791;7792 7189;7190 7189 1347;6430 2 LATNTSAPDLKNVR STTPRLSRLATNTSAP APDLKNVRSKVGSTEN R L A V R S 2 1 2 1 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 1 0 0 14 1 1498.8104 E7EVA0;P27816;H0Y2V1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 2068 2081 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 0.00046844 105.19 By MS/MS By MS/MS 2 2 36130000 19107000 17024000 3095 742 3429 7793;7794;7795;7796 7191;7192;7193;7194 7192 1347;6430 4 LATQLTGPVMPVR DSSAEELKLATQLTGP TGPVMPVRNVYKKEKA K L A V R N 1 1 0 0 0 1 0 1 0 0 2 0 1 0 2 0 2 0 0 2 0 0 13 0 1381.7752 P26373 P26373 146 158 RPL13 60S ribosomal protein L13 yes yes 2 0.0023384 97.813 By MS/MS By MS/MS 1 1 3662600 1549100 2113500 3096 1636 3430 7797;7798 7195;7196 7195 2 LAVEALSSLDGDLAGR GERRAIEKLAVEALSS LDGDLAGRYYALKSMT K L A G R Y 3 1 0 2 0 0 1 2 0 0 4 0 0 0 0 2 0 0 0 1 0 0 16 0 1585.8312 P12277;G3V4N7 P12277 157 172 CKB Creatine kinase B-type yes no 2 6.1417E-06 113.77 By MS/MS By MS/MS 1 1 10184000 6728100 3455700 3097 1571 3431 7799;7800 7197;7198 7197 2 LAVLSSSLTHWK RARQYSTRLAVLSSSL SSSLTHWKKLPPLPSL R L A W K K 1 0 0 0 0 0 0 0 1 0 3 1 0 0 0 3 1 1 0 1 0 0 12 0 1340.7452 F5GX19;F5H3Y3;Q6IAA8 F5GX19 92 103 LAMTOR1 Ragulator complex protein LAMTOR1 yes no 2 0.0061013 73.273 By MS/MS 1 1665000 1665000 0 3098 860 3432 7801 7199 7199 1549 1 LAVNMVPFPR QLNADLRKLAVNMVPF VNMVPFPRLHFFMPGF K L A P R L 1 1 1 0 0 0 0 0 0 0 1 0 1 1 2 0 0 0 0 2 0 0 10 0 1142.627 Q5JP53;P07437;Q5ST81;A0A0B4J269;Q13509;K7ESM5;A0A075B736;Q5SQY0;CON__ENSEMBL:ENSBTAP00000025008;A6NNZ2;Q9BUF5;Q9H4B7;P68371;Q3ZCM7;P04350;Q9BVA1;Q13885 Q5JP53 235 244 TUBB;TUBB3;TUBB6;TUBB8;TUBB1;TUBB4B;TUBB4A;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-6 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-2B chain;Tubulin beta-2A chain no no 2 5.3624E-05 135.77 By MS/MS By MS/MS 1 1 3786700 2099400 1687300 3099 1537;1935;1811 3433 7802;7803 7200;7201 7200 2 LAVRPLSVQAEILK LASSTLNKLAVRPLSV SVQAEILKRLSCSELS K L A L K R 2 1 0 0 0 1 1 0 0 1 3 1 0 0 1 1 0 0 0 2 0 0 14 1 1535.9399 Q12923 Q12923 920 933 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.0037678 76.85 By MS/MS By MS/MS 1 1 5763200 4075700 1687500 3100 1885 3434 7804;7805 7202;7203 7202 3591 2 LAWVGDVFTATPAEPRPLTSPLR GTPPVDPKLAWVGDVF RPLTSPLRQAADEDDK K L A L R Q 3 2 0 1 0 0 1 1 0 0 3 0 0 1 4 1 3 1 0 2 0 0 23 1 2493.338 P48634 P48634 789 811 PRRC2A Protein PRRC2A yes yes 3 4.3661E-13 94.281 By MS/MS By MS/MS 1 1 81196000 67609000 13587000 3101 1718 3435 7806;7807 7204;7205 7204 3212;6713 2 LAYKDLEIQMK ESIVSSLRLAYKDLEI KDLEIQMKKDEKMNIS R L A M K K 1 0 0 1 0 1 1 0 0 1 2 2 1 0 0 0 0 0 1 0 0 0 11 1 1350.7217 Q9NP61;H0Y6A0 Q9NP61 277 287 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes no 2;3 3.6906E-06 129.88 By MS/MS By matching 2 1 5289900 3552600 1737300 3102 2701 3436 7808;7809;7810 7206;7207 7206 7900 2 LAYQELQIDR ESMVASMRLAYQELQI YQELQIDRKKEEKKLQ R L A D R K 1 1 0 1 0 2 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 10 0 1247.651 Q8N6H7;A0A0D9SF70;G5E9L0;E9PIY6;H0YDN9;E9PQP3 Q8N6H7 276 285 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 2 2.9258E-06 149.72 By MS/MS By matching 1 1 7009600 3963500 3046200 3103 2321 3437 7811;7812 7208 7208 7800 1 LCAGIMITASHNPK PFTVSHLKLCAGIMIT ITASHNPKQDNGYKVY K L C P K Q 2 0 1 0 1 0 0 1 1 2 1 1 1 0 1 1 1 0 0 0 0 0 14 0 1511.7589 Q96G03 Q96G03 156 169 PGM2 Phosphoglucomutase-2 yes yes 2;3 0.0013159 77.051 By MS/MS By matching 2 1 8602200 7273200 1329100 3104 2486 3438 7813;7814;7815 7209;7210 7209 5012 2 LCDDGPQLPTSPR VSREPRLRLCDDGPQL PQLPTSPRLTAAARSA R L C P R L 0 1 0 2 1 1 0 1 0 0 2 0 0 0 3 1 1 0 0 0 0 0 13 0 1454.6824 H0YAZ3;O60504;H0YB51 H0YAZ3 32 44 SORBS3 Vinexin yes no 2 3.1224E-10 144.29 By MS/MS By MS/MS 1 1 94483000 52585000 41898000 3105 1052 3439 7816;7817 7211;7212;7213 7212 1956;6523 3 LCDDGPQLPTSPRLTAAAR VSREPRLRLCDDGPQL PRLTAAARSARHPSSP R L C A R S 3 2 0 2 1 1 0 1 0 0 3 0 0 0 3 1 2 0 0 0 0 0 19 1 2038.0266 H0YAZ3;O60504;H0YB51 H0YAZ3 32 50 SORBS3 Vinexin yes no 3 0.00082108 70.197 By MS/MS By MS/MS 1 1 10695000 5090100 5604700 3106 1052 3440 7818;7819 7214;7215 7215 1956;6523 2 LCDFGSASHVADNDITPYLVSR NESKTILKLCDFGSAS ITPYLVSRFYRAPEII K L C S R F 2 1 1 3 1 0 0 1 1 1 2 0 0 1 1 3 1 0 1 2 0 0 22 0 2436.138 Q13523;H0YDJ3 Q13523 832 853 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 2;3 2.1651E-14 114.1 By MS/MS By MS/MS 2 2 332190000 197160000 135030000 3107 1921 3441 7820;7821;7822;7823 7216;7217;7218;7219 7216 7689 4 LCDFGVSGQLIDSMANSFVGTR VNSRGEIKLCDFGVSG ANSFVGTRSYMAPERL K L C T R S 1 1 1 2 1 1 0 3 0 1 2 0 1 2 0 3 1 0 0 2 0 0 22 0 2373.1093 G5E9C7;P36507;H3BRW9;A0A1B0GUL7;Q02750 G5E9C7 113 134 MAP2K2;MAP2K1 Dual specificity mitogen-activated protein kinase kinase 2;Dual specificity mitogen-activated protein kinase kinase 1 yes no 2;3 0.00026882 73.831 By MS/MS 2 12698000 12698000 0 3108 993 3442 7824;7825 7220;7221 7220 1819;1820 2 LCSSSSSDTSSR LRKAKRARLCSSSSSD SSSDTSSRSFFDPTSQ R L C S R S 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 7 1 0 0 0 0 0 12 0 1272.5252 C9J0I9;Q86WB0 C9J0I9 362 373 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.00011455 115.24 By MS/MS By MS/MS 2 2 24376000 12037000 12339000 3109 551 3443 7826;7827;7828;7829 7222;7223;7224;7225 7225 1002 3 LCYVALDFEQEMATAASSSSLEK IVRDIKEKLCYVALDF ASSSSLEKSYELPDGQ K L C E K S 4 0 0 1 1 1 3 0 0 0 3 1 1 1 0 4 1 0 1 1 0 0 23 0 2549.1666 P63261;P60709;I3L4N8;Q6S8J3 P63261 216 238 ACTG1;ACTB;POTEE Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E yes no 3 0.00017488 72.316 By MS/MS By MS/MS 1 1 10194000 5729300 4464400 3110 1785 3444 7830;7831 7226;7227 7227 2 LDDGHLNNSLSSPVQADVYFPR ADSDAVVKLDDGHLNN QADVYFPRLIVPFCGH K L D P R L 1 1 2 3 0 1 0 1 1 0 3 0 0 1 2 3 0 0 1 2 0 0 22 0 2443.1768 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 14 35 LGALSL Galectin;Galectin-related protein yes no 3 4.4989E-10 100.81 By MS/MS By MS/MS 1 1 23464000 13083000 10380000 3111 537 3445 7832;7833 7228;7229 7228 976 2 LDDSCSGSVTYSYSALIVPKEMIK NCNGEEKKLDDSCSGS IVPKEMIKKAKKLIET K L D I K K 1 0 0 2 1 0 1 1 0 2 2 2 1 0 1 5 1 0 2 2 0 0 24 1 2662.287 P46100;A0A096LNL9;A0A096LNW1;A0A096LNN3 P46100 331 354 ATRX Transcriptional regulator ATRX yes no 3 0.030088 40.137 By MS/MS 1 0 0 0 3112 1708 3446 7834 7230 7230 1 LDFIESDSPCSSEALSK HNFLLEQKLDFIESDS CSSEALSKKELSAEEL K L D S K K 1 0 0 2 1 0 2 0 0 1 2 1 0 1 1 5 0 0 0 0 0 0 17 0 1883.8459 A0A0A0MSA7;A0A0U1RQK7;O43432 A0A0A0MSA7 1438 1454 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 2 0.0020162 70.685 By MS/MS By MS/MS 1 1 5174100 1928900 3245200 3113 213 3447 7835;7836 7231;7232 7232 388;389 2 LDFLPEMMVDHCSLNSSPVSK ________________ LNSSPVSKKMNGTLDH K L D S K K 0 0 1 2 1 0 1 0 1 0 3 1 2 1 2 4 0 0 0 2 0 0 21 0 2405.1065 F5H3J7;F5H0D8;E9PKU1;G5EA30 F5H3J7 6 26 CELF1 yes no 3 0.003339 55.907 By MS/MS By matching 1 1 41054000 22772000 18282000 3114 818 3448 7837;7838 7233 7233 1463;1464;1465 1 LDFLPEMMVDHCSLNSSPVSKK ________________ NSSPVSKKMNGTLDHP K L D K K M 0 0 1 2 1 0 1 0 1 0 3 2 2 1 2 4 0 0 0 2 0 0 22 1 2533.2015 F5H3J7;F5H0D8;E9PKU1;G5EA30 F5H3J7 6 27 CELF1 yes no 3 0.011357 43.116 By MS/MS By MS/MS 1 1 4216400 2439700 1776700 3115 818 3449 7839;7840 7234;7235 7235 1463;1464;1465 2 LDGENIYIR AWKKKRERLDGENIYI DGENIYIRHSNLMLED R L D I R H 0 1 1 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 9 0 1091.5611 Q4VB86;P11171 Q4VB86 412 420 EPB41 Protein 4.1 yes no 2 0.00097507 122.52 By MS/MS By MS/MS 1 1 124180000 65072000 59108000 3116 1561 3450 7841;7842 7236;7237 7237 7560 2 LDGLVETPTGYIESLPR ILAALQERLDGLVETP GYIESLPRVVKRRVNA R L D P R V 0 1 0 1 0 0 2 2 0 1 3 0 0 0 2 1 2 0 1 1 0 0 17 0 1858.9676 F8VRJ2;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;F8VV59;B7Z9C2;F8W0J6;F5H4R6;H0YIV4;P55209 F8VRJ2 15 31 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 2;3 0.006843 78.234 By MS/MS By MS/MS 2 1 6775700 4828600 1947200 3117 519 3451 7843;7844;7845 7238;7239 7238 6360;6361 1 LDIDSPPITAR TFLEHMCRLDIDSPPI DSPPITARNTGIICTI R L D A R N 1 1 0 2 0 0 0 0 0 2 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1196.6401 B4DNK4;H3BTN5;P14618;H3BQ34;H3BU13;H3BT25;H3BUW1;H3BTJ2;H3BN34;H3BQZ3 B4DNK4 33 43 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 0.0011849 100.55 By MS/MS By MS/MS 1 1 18544000 10642000 7902400 3118 485 3452 7846;7847 7240;7241;7242 7241 917 3 LDIPTGTTPQRK CFLEQDLKLDIPTGTT TGTTPQRKSYLYPSTL K L D R K S 0 1 0 1 0 1 0 1 0 1 1 1 0 0 2 0 3 0 0 0 0 0 12 1 1325.7303 P52732 P52732 919 930 KIF11 Kinesin-like protein KIF11 yes yes 2;3 0.0029881 99.844 By MS/MS By MS/MS 2 2 29984000 16388000 13596000 3119 1755 3453 7848;7849;7850;7851 7243;7244;7245 7243 6731;6732 3 LDPPPSPHANR ISSTTSPKLDPPPSPH PPSPHANRKKHRRKKS K L D N R K 1 1 1 1 0 0 0 0 1 0 1 0 0 0 4 1 0 0 0 0 0 0 11 0 1199.6047 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C0A7;H7C211 A0A087X1U1 409 419 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 3 0.017597 55.196 By matching By MS/MS 1 1 4290400 1475000 2815400 3120 142 3454 7852;7853 7246 7246 245 1 LDQPVSAPPSPR EKRILQEKLDQPVSAP VSAPPSPRDISMEIDS K L D P R D 1 1 0 1 0 1 0 0 0 0 1 0 0 0 4 2 0 0 0 1 0 0 12 0 1262.6619 Q16204 Q16204 235 246 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 1.0037E-06 122.12 By MS/MS By MS/MS 2 2 137380000 73737000 63646000 3121 2014 3455;3456 7854;7855;7856;7857 7247;7248;7249;7250;7251;7252;7253;7254 7249 3924;3925 8 LDSDRVSSASSTAER PTSKSTTRLDSDRVSS SASSTAERGMVKPMIR R L D E R G 2 2 0 2 0 0 1 0 0 0 1 0 0 0 0 5 1 0 0 1 0 0 15 1 1579.7438 A8MQ02;J3KN01;P55196;Q5TIG5;H0Y7R8 A8MQ02 514 528 MLLT4 Afadin yes no 2 0.024225 51.998 By MS/MS 1 0 0 0 3122 431 3457 7858 7255 7255 1 LDSPPPSPITEASEAAEAAEAGNLAVSSR PSGLGVWRLDSPPPSP GNLAVSSREEGVSQQG R L D S R E 7 1 1 1 0 0 4 1 0 1 2 0 0 0 4 5 1 0 0 1 0 0 29 0 2836.3727 Q9C0C2 Q9C0C2 492 520 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 0.00072428 56.021 By MS/MS By MS/MS 1 1 13026000 7271500 5754600 3123 2615 3458 7859;7860 7256;7257 7256 5300;5301 2 LDSPYFR PFDKYAPKLDSPYFRH KLDSPYFRHSSVSFFP K L D F R H 0 1 0 1 0 0 0 0 0 0 1 0 0 1 1 1 0 0 1 0 0 0 7 0 896.43922 Q9HCM7 Q9HCM7 485 491 FBRSL1 Fibrosin-1-like protein yes yes 2 0.011331 98.582 By MS/MS By MS/MS 1 1 4991100 2570100 2421000 3124 2696 3459 7861;7862 7258;7259 7258 5504 2 LDSQPQETSPELPR HVTEGIPRLDSQPQET ETSPELPRRRVRHQGD R L D P R R 0 1 0 1 0 2 2 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 14 0 1595.7791 O14545 O14545 407 420 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2;3 1.4908E-128 233.62 By MS/MS By MS/MS 3 3 283300000 153680000 129620000 3125 1340 3460;3461 7863;7864;7865;7866;7867;7868 7260;7261;7262;7263;7264;7265;7266 7265 2427;2428;6591 7 LDSSEMDHSENEDYTMSSPLPGKK SPGRIKGRLDSSEMDH SSPLPGKKSDKRDDSD R L D K K S 0 0 1 3 0 0 3 1 1 0 2 2 2 0 2 5 1 0 1 0 0 0 24 1 2696.1582 Q9NTI5;A9IYQ1 Q9NTI5 1174 1197 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 0.012044 45.413 By MS/MS 1 1989200 1989200 0 3126 2731 3462 7869 7267 7267 359 5586 1 LDSSPSVSSTLAAK QASKATPKLDSSPSVS VSSTLAAKDDPDGKQE K L D A K D 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 1 0 0 14 0 1361.7038 Q13428;J3KQ96;E7ETY2 Q13428 1225 1238 TCOF1 Treacle protein yes no 2 2.1115E-12 134.88 By MS/MS By MS/MS 1 1 44926000 25074000 19852000 3127 1915 3463 7870;7871 7268;7269 7269 3682;3683 2 LDSSPVSSPR FGPNKMMRLDSSPVSS SSPVSSPRKHSAELIA R L D P R K 0 1 0 1 0 0 0 0 0 0 1 0 0 0 2 4 0 0 0 1 0 0 10 0 1043.5247 O60293 O60293 946 955 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 1.6959E-05 128.88 By MS/MS By MS/MS 3 2 24826000 12274000 12552000 3128 1402 3464;3465 7872;7873;7874;7875;7876 7270;7271;7272;7273;7274 7271 2576;2577;2578 4 LDTFCGSPPYAAPELFQGK NEFTFGNKLDTFCGSP APELFQGKKYDGPEVD K L D G K K 2 0 0 1 1 1 1 2 0 0 2 1 0 2 3 1 1 0 1 0 0 0 19 0 2096.9877 E7ETY4;E9PC69;Q7KZI7;K7EN95;Q6IPE9;Q96L34;A0A0A0MQR8;A0A0A0MSZ1;A0A0A0MT23;J3KNR0;P27448;B4DIB3;A0A087X0I6;Q9P0L2 E7ETY4 173 191 MARK2;MARK4;MARK3;MARK1 Serine/threonine-protein kinase MARK2;MAP/microtubule affinity-regulating kinase 4;MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK1 no no 2 0.0068444 70.942 By matching By MS/MS 1 1 11669000 6526200 5142800 3129 738;160;127 3466 7877;7878 7275 7275 6253 1 LDVTILSPSRK RGAGGQGKLDVTILSP TILSPSRKVVPCLVTP K L D R K V 0 1 0 1 0 0 0 0 0 1 2 1 0 0 1 2 1 0 0 1 0 0 11 1 1227.7187 O75369;E7EN95 O75369 977 987 FLNB Filamin-B yes no 2 0.0090687 79.886 By MS/MS 1 1395700 1395700 0 3130 1434 3467 7879 7276 7276 2643 1 LDYCGGSGEPGGVQR RKLRAMCRLDYCGGSG GEPGGVQRAFSASSAS R L D Q R A 0 1 0 1 1 1 1 5 0 0 1 0 0 0 1 1 0 0 1 1 0 0 15 0 1550.6784 Q15464 Q15464 112 126 SHB SH2 domain-containing adapter protein B yes yes 2 2.6739E-07 120.03 By MS/MS By MS/MS 1 1 16660000 9597400 7063000 3131 1992 3468 7880;7881 7277;7278 7278 7718 2 LEDSEVRSVASNQSEMEFSSLQDMPK EEEFAGAKLEDSEVRS SSLQDMPKELDPSAVL K L E P K E 1 1 1 2 0 2 4 0 0 0 2 1 2 1 1 6 0 0 0 2 0 0 26 1 2942.3274 Q8N163;A0A087X2B6;G3V119;H0YB24 Q8N163 668 693 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 3 0.026762 41.763 By matching By MS/MS 1 1 8152100 4018100 4134000 3132 2297 3469 7882;7883 7279 7279 4611;4612;4613 1 LEEPPELNRQSPNPR LVPNGFSKLEEPPELN NRQSPNPRRGHAVPPT K L E P R R 0 2 2 0 0 1 3 0 0 0 2 0 0 0 4 1 0 0 0 0 0 0 15 1 1774.8962 Q7Z5L9 Q7Z5L9 165 179 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2;3 0.00096269 76.24 By MS/MS By MS/MS 2 2 308570000 174150000 134430000 3133 2221 3470 7884;7885;7886;7887 7280;7281;7282 7280 4442 3 LEGQGDVPTPK PEAVRWEKLEGQGDVP QGDVPTPKQFVADVKN K L E P K Q 0 0 0 1 0 1 1 2 0 0 1 1 0 0 2 0 1 0 0 1 0 0 11 0 1139.5823 Q9Y2Z0 Q9Y2Z0 257 267 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 0.01833 79.744 By MS/MS By matching 1 1 9393000 4534800 4858200 3134 2900 3471 7888;7889 7283 7283 1 LEGVDGGQSPR ADEDLIFRLEGVDGGQ VDGGQSPRAGHDGDSD R L E P R A 0 1 0 1 0 1 1 3 0 0 1 0 0 0 1 1 0 0 0 1 0 0 11 0 1113.5415 O00418;H3BRH4 O00418 10 20 EEF2K Eukaryotic elongation factor 2 kinase yes no 2 0.0012488 99.844 By MS/MS By MS/MS 1 1 6245900 2346800 3899100 3135 1332 3472 7890;7891 7284;7285 7284 2401 2 LELPLSR LPEPGGLRLELPLSRR RLELPLSRRGAPDPVG R L E S R R 0 1 0 0 0 0 1 0 0 0 3 0 0 0 1 1 0 0 0 0 0 0 7 0 826.49125 S4R446;Q86XN8 S4R446 349 355 MEX3D RNA-binding protein MEX3D yes no 2 0.013705 96.034 By matching By MS/MS 1 1 69187000 36131000 33057000 3136 2253 3473 7892;7893 7286 7286 4519 1 LELQGPR EIEGRAIRLELQGPRG RLELQGPRGSPNARSQ R L E P R G 0 1 0 0 0 1 1 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 7 0 811.4552 P19338;H7BY16 P19338 555 561 NCL Nucleolin yes no 2 0.0085029 121.68 By MS/MS By MS/MS 1 1 4652000 2424500 2227500 3137 1604 3474 7894;7895 7287;7288 7288 2 LELQGPRGSPNAR EIEGRAIRLELQGPRG PRGSPNARSQPSKTLF R L E A R S 1 2 1 0 0 1 1 2 0 0 2 0 0 0 2 1 0 0 0 0 0 0 13 1 1393.7426 P19338;H7BY16 P19338 555 567 NCL Nucleolin yes no 2 0.0029891 86.014 By MS/MS By MS/MS 1 1 667450000 348540000 318920000 3138 1604 3475 7896;7897 7289;7290 7289 2960 2 LELSHEYKNRNQLR PQASAWKKLELSHEYK YKNRNQLREYQLEGVN K L E L R E 0 2 2 0 0 1 2 0 1 0 3 1 0 0 0 1 0 0 1 0 0 0 14 2 1798.9438 Q9HCK8;H0YJG4 Q9HCK8 799 812 CHD8 Chromodomain-helicase-DNA-binding protein 8 no no 1 NaN 0 0 0 3139 2694 0 LENEGSDEDIETDVLYSPQMALK STVSIQIKLENEGSDE YSPQMALKLALTEWLQ K L E L K L 1 0 1 3 0 1 4 1 0 1 3 1 1 0 1 2 1 0 1 1 0 0 23 0 2595.1898 O60502 O60502 359 381 MGEA5 Protein O-GlcNAcase yes yes 3 0.00070346 59.918 By MS/MS 1 11163000 0 11163000 3140 1412 3476 7898 7291 7291 2602 1 LENIQSPSEQK RTLDLLNRLENIQSPS IQSPSEQKIKRSVSDI R L E Q K I 0 0 1 0 0 2 2 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 11 0 1271.6357 Q13023 Q13023 1639 1649 AKAP6 A-kinase anchor protein 6 yes yes 2 0.0033726 91.867 By MS/MS 1 19359000 19359000 0 3141 1892 3477 7899 7292 7292 1 LENLHGAMYT RKQQQQHRLENLHGAM NLHGAMYT________ R L E Y T - 1 0 1 0 0 0 1 1 1 0 2 0 1 0 0 0 1 0 1 0 0 0 10 0 1147.5332 Q9P0P0 Q9P0P0 144 153 RNF181 E3 ubiquitin-protein ligase RNF181 yes yes 2 0.0085209 60.828 By MS/MS 1 0 0 0 3142 2774 3478 7900 7293 7293 365 7922 1 LENSPLGEALR TCQEKFKKLENSPLGE SPLGEALRSGQARRSS K L E L R S 1 1 1 0 0 0 2 1 0 0 3 0 0 0 1 1 0 0 0 0 0 0 11 0 1197.6354 D6RDK6;D6RBN5;Q9NX40;D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9 D6RDK6 51 61 OCIAD1 OCIA domain-containing protein 1 yes no 2 0.026439 58.781 By MS/MS 1 2725100 2725100 0 3143 661 3479 7901 7294 7294 1190 1 LENVSQLSLDKSPTEK FYQHNVEKLENVSQLS LDKSPTEKSTQYLNQH K L E E K S 0 0 1 1 0 1 2 0 0 0 3 2 0 0 1 3 1 0 0 1 0 0 16 1 1786.9313 Q86W56 Q86W56 126 141 PARG Poly(ADP-ribose) glycohydrolase yes yes 3 0.0038882 60.761 By MS/MS By matching 1 1 2886600 1551300 1335300 3144 2246 3480 7902;7903 7295 7295 4493 1 LEPLGETHHNDFYR PKVTRLPKLEPLGETH THHNDFYRKPLPPLAV K L E Y R K 0 1 1 1 0 0 2 1 2 0 2 0 0 1 1 0 1 0 1 0 0 0 14 0 1726.8063 Q3SXY8 Q3SXY8 394 407 ARL13B ADP-ribosylation factor-like protein 13B yes yes 3 0.0015503 68.277 By MS/MS By MS/MS 1 1 10034000 5474700 4558900 3145 2039 3481 7904;7905 7296;7297 7296 7731 2 LEPNSPMHGGTLLEDVVGGR SSSEANFKLEPNSPMH LEDVVGGRQTTPESDF K L E G R Q 0 1 1 1 0 0 2 4 1 0 3 0 1 0 2 1 1 0 0 2 0 0 20 0 2077.0262 Q5VY60;Q7Z4H7 Q5VY60 665 684 HAUS6 HAUS augmin-like complex subunit 6 yes no 3 2.3636E-05 80.975 By MS/MS By MS/MS 2 2 8732300 4989700 3742600 3146 2122 3482;3483 7906;7907;7908;7909 7298;7299;7300;7301 7299 286 4214 4 LEPQELSPLSATVFPK AFQGLEPKLEPQELSP LSATVFPKVEHSPGPP K L E P K V 1 0 0 0 0 1 2 0 0 0 3 1 0 1 3 2 1 0 0 1 0 0 16 0 1754.9455 A0A087WUE6;Q3T8J9;Q9H869 A0A087WUE6 1249 1264 GON4L;YY1AP1 GON-4-like protein;YY1-associated protein 1 yes no 2 0.00244 69.805 By MS/MS By MS/MS 1 1 8258000 4691600 3566400 3147 46 3484 7910;7911 7302;7303 7303 77 2 LEQGQAIDDLMPAQK LLIEMEQRLEQGQAID DDLMPAQK________ R L E Q K - 2 0 0 2 0 3 1 1 0 1 2 1 1 0 1 0 0 0 0 0 0 0 15 0 1655.8189 P12277;H0YJG0 P12277 367 381 CKB Creatine kinase B-type yes no 2 0.00078466 89.43 By MS/MS By MS/MS 1 1 8368800 4327300 4041600 3148 1571 3485 7912;7913 7304;7305 7304 2 LEQNGSPLGR GPPAKIARLEQNGSPL QNGSPLGRGRLGSTGA R L E G R G 0 1 1 0 0 1 1 2 0 0 2 0 0 0 1 1 0 0 0 0 0 0 10 0 1069.5516 C9J3I0;H0YN86;C9JLL5;C9J7F3;C9JGL9;C9IZC5;C9JP21;Q01826 C9J3I0 33 42 SATB1 DNA-binding protein SATB1 yes no 2 0.006146 99.752 By MS/MS By MS/MS 1 1 10169000 5454000 4715100 3149 543 3486 7914;7915 7306;7307 7307 993 0 LEQNGSPMGAR PPPVKVARLEQNGSPM NGSPMGARGRPNGAVA R L E A R G 1 1 1 0 0 1 1 2 0 0 1 0 1 0 1 1 0 0 0 0 0 0 11 0 1158.5452 C9JR56;Q9UPW6;F8WCV6 C9JR56 34 44 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 yes no 2 0.0038759 81.278 By MS/MS By MS/MS 1 1 7484200 4062300 3421900 3150 604 3487 7916;7917 7308;7309 7308 1098 2 LEQYTLSLKPPK L E P K 0 0 0 0 0 1 1 0 0 0 3 2 0 0 2 1 1 0 1 0 0 0 12 1 1415.8024 REV__A0A0D9SEN0 yes yes 2 0.015571 64.841 By MS/MS 1 837970 0 837970 + 3151 2963 3488 7918 7310 7310 6148 0 LERQISQDVKLEPDILLR QLEERRQRLERQISQD LEPDILLRAKQD____ R L E L R A 0 2 0 2 0 2 2 0 0 2 4 1 0 0 1 1 0 0 0 1 0 0 18 2 2164.2216 E9PJF6;H0YCL9;H0Y360;Q01433;E9PIJ1 E9PJF6 82 99 AMPD2 AMP deaminase 2 yes no 3 0.017211 49.343 By MS/MS By matching 1 1 4764200 3502600 1261500 3152 810 3489 7919;7920 7311 7311 1453 1 LESESTSPSLEMK SSEVSKPKLESESTSP TSPSLEMKIHNFLKGN K L E M K I 0 0 0 0 0 0 3 0 0 0 2 1 1 0 1 4 1 0 0 0 0 0 13 0 1436.6705 Q5VT52 Q5VT52 659 671 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 0.0067911 67.113 By MS/MS By matching 1 1 11880000 5364200 6515800 3153 2115 3490 7921;7922 7312 7312 285 4190 1 LESLNIQR TIEERKERLESLNIQR LESLNIQREKEELEQR R L E Q R E 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 971.53999 Q14152 Q14152 582 589 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0071245 98.044 By MS/MS By MS/MS 1 1 7574800 2876700 4698100 3154 1940 3491 7923;7924 7313;7314 7313 3742 2 LEVREDPSSNK RTGVSLEKLEVREDPS REDPSSNKDLKVQCDE K L E N K D 0 1 1 1 0 0 2 0 0 0 1 1 0 0 1 2 0 0 0 1 0 0 11 1 1272.631 B4DFB6;Q6IQ26 B4DFB6 462 472 DENND5A DENN domain-containing protein 5A yes no 2 0.024323 69.812 By MS/MS By matching 1 1 13513000 6497100 7015800 3155 480 3492 7925;7926 7315 7315 1 LEVSPEAQPTAR QTRAVKPRLEVSPEAQ PEAQPTARLPSPTDSP R L E A R L 2 1 0 0 0 1 2 0 0 0 1 0 0 0 2 1 1 0 0 1 0 0 12 0 1296.6674 Q6WKZ4 Q6WKZ4 542 553 RAB11FIP1 Rab11 family-interacting protein 1 yes yes 2 0.0036649 80.371 By MS/MS By matching 1 1 8065900 4663800 3402200 3156 2175 3493 7927;7928 7316 7316 4349 1 LFDDEASVDEPR FTLVCCRRLFDDEASV EASVDEPRRTETSLPE R L F P R R 1 1 0 3 0 0 2 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 12 0 1391.6205 Q8NI35;A0A0U1RR46;A0A0X1KG69;A0A087WUZ6 Q8NI35 639 650 INADL InaD-like protein yes no 2 0.00046708 108.59 By matching By MS/MS 1 1 7710900 4120300 3590600 3157 2365 3494 7929;7930 7317;7318 7317 4742 2 LFEDDDSNEKLFDEEEDSSEK EVEDADEKLFEDDDSN EEEDSSEKLFDDSDER K L F E K L 0 0 1 5 0 0 6 0 0 0 2 2 0 2 0 3 0 0 0 0 0 0 21 1 2519.0347 O43719 O43719 696 716 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.011314 47.618 By MS/MS By MS/MS 1 1 7838700 4896600 2942100 3158 1392 3495 7931;7932 7319;7320 7319 2553 2 LFEESDDKEDEDADGKEVEDADEK EEGDADEKLFEESDDK EVEDADEKLFEDDDSN K L F E K L 2 0 0 7 0 0 7 1 0 0 1 3 0 1 0 1 0 0 0 1 0 0 24 2 2756.1308 O43719 O43719 672 695 HTATSF1 HIV Tat-specific factor 1 yes yes 3 1.4278E-19 115.88 By MS/MS By MS/MS 1 1 70222000 35932000 34290000 3159 1392 3496 7933;7934 7321;7322 7321 2554 2 LFGAPEPSTIARSLPTTVPESPNYR PTDALANKLFGAPEPS VPESPNYRNTRTPRTP K L F Y R N 2 2 1 0 0 0 2 1 0 1 2 0 0 1 5 3 3 0 1 1 0 0 25 1 2699.3919 Q6PKG0;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 754 778 LARP1 La-related protein 1 yes no 3 3.0713E-05 73.405 By MS/MS By MS/MS 1 1 43611000 25786000 17825000 3160 2162 3497 7935;7936 7323;7324 7323 4308;4309;4310;6910;6911 2 LFLDHDKTLQTDSIDSFETQRTPR KNKDLDARLFLDHDKT FETQRTPRKSNLDEEV R L F P R K 0 2 0 4 0 2 1 0 1 1 3 1 0 2 1 2 4 0 0 0 0 0 24 2 2862.4148 P06400 P06400 335 358 RB1 Retinoblastoma-associated protein yes yes 4 0.0010593 56.748 By matching By MS/MS 1 1 31175000 12945000 18230000 3161 1530 3498 7937;7938 7325 7325 6657 1 LFLINEQSPR GINKLLNKLFLINEQS LINEQSPRASEETLLG K L F P R A 0 1 1 0 0 1 1 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 10 0 1215.6612 E9PFF8;Q6NW34 E9PFF8 188 197 C3orf17 Uncharacterized protein C3orf17 yes no 2 0.0014741 103.43 By MS/MS By MS/MS 1 1 4538300 2620200 1918100 3162 779 3499 7939;7940 7326;7327 7326 1405 2 LFMAQALQEYNN FTAQNLGKLFMAQALQ QALQEYNN________ K L F N N - 2 0 2 0 0 2 1 0 0 0 2 0 1 1 0 0 0 0 1 0 0 0 12 0 1440.6708 A0A087WZK9;B3KS98;O15372 A0A087WZK9 338 349 EIF3H Eukaryotic translation initiation factor 3 subunit H yes no 2 0.0063723 85.862 By MS/MS By matching 1 1 10488000 5524200 4963500 3163 113 3500 7941;7942 7328 7328 1 LFPADTSPSTATK ISNGGSQKLFPADTSP TSPSTATKIHSPIPDM K L F T K I 2 0 0 1 0 0 0 0 0 0 1 1 0 1 2 2 3 0 0 0 0 0 13 0 1334.6718 Q6NZY4 Q6NZY4 643 655 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 2 0.022486 72.209 By MS/MS 1 0 0 0 3164 2149 3501 7943 7329 7329 1 LFPSPGLPTRTSPVR SHEIQPLRLFPSPGLP PTRTSPVRGSKRMVST R L F V R G 0 2 0 0 0 0 0 1 0 0 2 0 0 1 4 2 2 0 0 1 0 0 15 1 1623.9097 M0QYT1;M0R2C2;Q8IY17 M0QYT1 162 176 PNPLA6 Neuropathy target esterase yes no 3 0.002806 65.563 By MS/MS By MS/MS 1 1 5496300 2800300 2696000 3165 1305 3502 7944;7945 7330;7331 7331 2342;6581;6582 2 LFQIYSK ASSHGTRKLFQIYSKS KLFQIYSKSPFYRAAS K L F S K S 0 0 0 0 0 1 0 0 0 1 1 1 0 1 0 1 0 0 1 0 0 0 7 0 897.496 H3BV44;B2RTY4;H3BU05 H3BV44 1300 1306 MYO9A Unconventional myosin-IXa yes no 2 0.0093189 100.74 By MS/MS By MS/MS 1 1 2301900 1094500 1207300 3166 472 3503 7946;7947 7332;7333 7333 898;7284 2 LFQKNSPMEDLGAK TASQGLLKLFQKNSPM PMEDLGAKGAKEKMKE K L F A K G 1 0 1 1 0 1 1 1 0 0 2 2 1 1 1 1 0 0 0 0 0 0 14 1 1576.7919 Q66K14;H0YB08 Q66K14 458 471 TBC1D9B TBC1 domain family member 9B yes no 2 0.0016149 87.863 By MS/MS By MS/MS 1 1 4722700 2822300 1900500 3167 2130 3504 7948;7949 7334;7335 7334 4239 2 LFQLGPPSPVK DEEGELEKLFQLGPPS LGPPSPVKMPSPPWEC K L F V K M 0 0 0 0 0 1 0 1 0 0 2 1 0 1 3 1 0 0 0 1 0 0 11 0 1181.6808 Q9NZH5;O95997 Q9NZH5 158 168 PTTG2;PTTG1 Securin-2;Securin yes no 2 0.0015215 96.82 By MS/MS By MS/MS 1 1 3510700 1705200 1805600 3168 1505 3505 7950;7951 7336;7337;7338 7336 2791 3 LFQQIYSDGSDEVKR EGDAALNRLFQQIYSD DGSDEVKRAMNKSFME R L F K R A 0 1 0 2 0 2 1 1 0 1 1 1 0 1 0 2 0 0 1 1 0 0 15 1 1783.8741 Q9Y2Z0 Q9Y2Z0 312 326 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2;3 4.3046E-14 132.56 By MS/MS By MS/MS 2 2 56708000 29517000 27190000 3169 2900 3506 7952;7953;7954;7955 7339;7340;7341;7342;7343 7340 7952 5 LFRPPSPAPAAPGAR PAGSRSGRLFRPPSPA APAAPGARLLRLPGSG R L F A R L 4 2 0 0 0 0 0 1 0 0 1 0 0 1 5 1 0 0 0 0 0 0 15 1 1503.831 Q86U90 Q86U90 32 46 YRDC YrdC domain-containing protein, mitochondrial yes yes 2;3 0.00017387 92.39 By MS/MS By MS/MS 2 2 162800000 93396000 69405000 3170 2234 3507 7956;7957;7958;7959 7344;7345;7346;7347 7346 4474 3 LFSADPFDLEAQAK RREQERIRLFSADPFD FDLEAQAKIEEDIRQQ R L F A K I 3 0 0 2 0 1 1 0 0 0 2 1 0 2 1 1 0 0 0 0 0 0 14 0 1550.7617 Q5TDH0;H0YII4;H0YI90 Q5TDH0 192 205 DDI2 Protein DDI1 homolog 2 yes no 2 1.4745E-07 123.76 By MS/MS By MS/MS 1 1 20128000 10366000 9762300 3171 2111 3508 7960;7961 7348;7349 7348 4168 2 LFSDEDDR FRNSKRSRLFSDEDDR LFSDEDDRQINTRSPK R L F D R Q 0 1 0 3 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 8 0 995.4196 H0Y322;Q5TKA1;B1B047 H0Y322 134 141 LIN9 Protein lin-9 homolog yes no 2 0.025088 67.207 By MS/MS By matching 1 1 13694000 8395800 5297700 3172 1008 3509 7962;7963 7350 7350 1857 1 LFSLSNPSLSTTNLSGPSR SALHPSLRLFSLSNPS TNLSGPSRRRQPPVSP R L F S R R 0 1 2 0 0 0 0 1 0 0 4 0 0 1 2 6 2 0 0 0 0 0 19 0 1977.0167 Q6UUV7 Q6UUV7 366 384 CRTC3 CREB-regulated transcription coactivator 3 yes yes 2;3 2.2988E-09 113.76 By MS/MS By MS/MS 2 2 74887000 42316000 32571000 3173 2169 3510 7964;7965;7966;7967 7351;7352;7353;7354 7351 4328;4329 4 LFSPVIAR KTPDSEDKLFSPVIAR LFSPVIARNLADEIES K L F A R N 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 1 0 0 8 0 901.53854 X6R5W5;X6RAE7;R4GNB2;R4GN35;Q5VZ89 X6R5W5 10 17 DENND4C DENN domain-containing protein 4C yes no 2 0.0057511 106.88 By MS/MS By MS/MS 1 1 2383600 1297200 1086300 3174 2123 3511 7968;7969 7355;7356 7355 4217 2 LFSQGQDVSNK LTFKERQRLFSQGQDV QGQDVSNKVKASRKLT R L F N K V 0 0 1 1 0 2 0 1 0 0 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1221.599 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1754 1764 MLLT4 Afadin yes no 2 8.1552E-06 136.33 By MS/MS By MS/MS 1 1 140600000 81084000 59520000 3175 431 3512 7970;7971 7357;7358 7357 816 2 LFSQGQDVSNKVK LTFKERQRLFSQGQDV QDVSNKVKASRKLTEL R L F V K A 0 0 1 1 0 2 0 1 0 0 1 2 0 1 0 2 0 0 0 2 0 0 13 1 1448.7623 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1754 1766 MLLT4 Afadin yes no 2;3 3.6324E-21 167.92 By MS/MS By MS/MS 2 2 168770000 100790000 67976000 3176 431 3513 7972;7973;7974;7975 7359;7360;7361;7362 7359 816 4 LFSQGQDVSNKVKASR LTFKERQRLFSQGQDV SNKVKASRKLTELENE R L F S R K 1 1 1 1 0 2 0 1 0 0 1 2 0 1 0 3 0 0 0 2 0 0 16 2 1762.9326 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1754 1769 MLLT4 Afadin yes no 3 0.00015953 90.379 By MS/MS By MS/MS 1 1 19498000 11582000 7915800 3177 431 3514 7976;7977 7363;7364 7363 816 2 LFSSSFNGGR QRGGGSSKLFSSSFNG SSSFNGGRRDELPICG K L F G R R 0 1 1 0 0 0 0 2 0 0 1 0 0 2 0 3 0 0 0 0 0 0 10 0 1070.5145 H0YGL7;F5H5P6;Q8N5U6 H0YGL7 86 95 RNF10 RING finger protein 10 yes no 2 0.0098166 71.555 By matching By MS/MS 1 1 4043000 2144600 1898500 3178 889 3515 7978;7979 7365 7365 1596 1 LFTFSHPVRSR TRPPSRRKLFTFSHPV FSHPVRSRDTDRFLDV K L F S R D 0 2 0 0 0 0 0 0 1 0 1 0 0 2 1 2 1 0 0 1 0 0 11 1 1345.7255 C9J5F6;C9JNS8;A4D2P6 C9J5F6 476 486 GRID2IP Delphilin yes no 2 0.020843 64.64 By MS/MS By matching 1 1 4477400 2749100 1728300 3179 406 3516 7980;7981 7366 7366 774 0 LFVENDSPSDGGTPGR PASTTRRRLFVENDSP SDGGTPGRMPPQPLVN R L F G R M 0 1 1 2 0 0 1 3 0 0 1 0 0 1 2 2 1 0 0 1 0 0 16 0 1646.7536 Q08999;F5H837 Q08999 682 697 RBL2 Retinoblastoma-like protein 2 yes no 2 0.001726 73.802 By MS/MS By MS/MS 1 1 6504500 4073800 2430700 3180 1867 3517 7982;7983 7367;7368 7367 3513 2 LFVGNLPADITEDEFKR KTYTQRCRLFVGNLPA ITEDEFKRLFAKYGEP R L F K R L 1 1 1 2 0 0 2 1 0 1 2 1 0 2 1 0 1 0 0 1 0 0 17 1 1963.0051 P23246 P23246 299 315 SFPQ Splicing factor, proline- and glutamine-rich yes yes 3 0.02289 64.244 By matching By MS/MS 1 1 3272200 1853600 1418600 3181 1620 3518 7984;7985 7369 7369 1 LFVLLPEQSPVSYSKR DRHANTIRLFVLLPEQ SPVSYSKRTAYQKAGG R L F K R T 0 1 0 0 0 1 1 0 0 0 3 1 0 1 2 3 0 0 1 2 0 0 16 1 1862.0302 Q96K76 Q96K76 824 839 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 3 0.018777 43.208 By MS/MS 1 1409700 1409700 0 3182 2511 3519 7986 7370 7370 5073 1 LFVTNDAATILR MVINHLEKLFVTNDAA NDAATILRELEVQHPA K L F L R E 2 1 1 1 0 0 0 0 0 1 2 0 0 1 0 0 2 0 0 1 0 0 12 0 1332.7402 P50990;H7C4C8 P50990 63 74 CCT8 T-complex protein 1 subunit theta yes no 2 0.0084221 75.509 By MS/MS 1 1703900 1703900 0 3183 1741 3520 7987 7371 7371 1 LGAAPEEESAYVAGEK PFAGGGYRLGAAPEEE SAYVAGEKRQHSSQDV R L G E K R 4 0 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 16 0 1619.7679 F2Z2K0;Q9UNZ2 F2Z2K0 157 172 NSFL1C NSFL1 cofactor p47 yes no 2 3.1406E-15 132.56 By MS/MS By MS/MS 1 1 56072000 34123000 21949000 3184 848 3521 7988;7989 7372;7373;7374;7375 7373 7397 4 LGAAPEEESAYVAGEKR PFAGGGYRLGAAPEEE AYVAGEKRQHSSQDVH R L G K R Q 4 1 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 17 1 1775.869 F2Z2K0;Q9UNZ2 F2Z2K0 157 173 NSFL1C NSFL1 cofactor p47 yes no 2;3 1.1951E-37 171.26 By MS/MS By MS/MS 2 2 758360000 445720000 312640000 3185 848 3522 7990;7991;7992;7993 7376;7377;7378;7379 7376 7397 4 LGAGEGGEASVSPEK PRSKKKKKLGAGEGGE EASVSPEKTSTTSKGK K L G E K T 2 0 0 0 0 0 3 4 0 0 1 1 0 0 1 2 0 0 0 1 0 0 15 0 1386.6627 Q13428;J3KQ96;E7ETY2 Q13428 1367 1381 TCOF1 Treacle protein yes no 2 2.3855E-28 158.14 By MS/MS By MS/MS 1 1 64236000 34568000 29669000 3186 1915 3523 7994;7995 7380;7381 7381 3678 2 LGAGEGGEASVSPEKTSTTSK PRSKKKKKLGAGEGGE EKTSTTSKGKAKRDKA K L G S K G 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 4 3 0 0 1 0 0 21 1 1991.9647 Q13428;J3KQ96;E7ETY2 Q13428 1367 1387 TCOF1 Treacle protein yes no 2;3 2.7125E-10 103.71 By MS/MS By MS/MS 2 2 846530000 407630000 438900000 3187 1915 3524 7996;7997;7998;7999 7382;7383;7384;7385 7384 3678 4 LGAGEGGEASVSPEKTSTTSKGK PRSKKKKKLGAGEGGE TSTTSKGKAKRDKASG K L G G K A 2 0 0 0 0 0 3 5 0 0 1 3 0 0 1 4 3 0 0 1 0 0 23 2 2177.0812 Q13428;J3KQ96;E7ETY2 Q13428 1367 1389 TCOF1 Treacle protein yes no 3 0.00023373 70.907 By MS/MS By MS/MS 1 1 159930000 84562000 75364000 3188 1915 3525 8000;8001 7386;7387 7386 3678 2 LGAGGGSPEKSPSAQELK EEKEGGARLGAGGGSP SPSAQELKEQGNRLFV R L G L K E 2 0 0 0 0 1 2 4 0 0 2 2 0 0 2 3 0 0 0 0 0 0 18 1 1711.8741 H3BS86;Q9UNE7 H3BS86 13 30 STUB1 E3 ubiquitin-protein ligase CHIP yes no 2;3 8.9614E-46 171.52 By MS/MS By MS/MS 4 5 1398700000 782870000 615810000 3189 1140 3526;3527 8002;8003;8004;8005;8006;8007;8008;8009;8010 7388;7389;7390;7391;7392;7393;7394;7395 7394 2078;2079;2080 8 LGAGGGSPEKSPSAQELKEQGNR EEKEGGARLGAGGGSP ELKEQGNRLFVGRKYP R L G N R L 2 1 1 0 0 2 3 5 0 0 2 2 0 0 2 3 0 0 0 0 0 0 23 2 2296.1408 H3BS86;Q9UNE7 H3BS86 13 35 STUB1 E3 ubiquitin-protein ligase CHIP yes no 3;4 0.00029762 62.792 By MS/MS By MS/MS 2 2 400850000 187400000 213440000 3190 1140 3528 8011;8012;8013;8014 7396;7397 7397 2078;2079;2080 2 LGAHEGLSPTPFMNSNLMGK SDHLNDSRLGAHEGLS MNSNLMGKTSERGSFS R L G G K T 1 0 2 0 0 0 1 3 1 0 3 1 2 1 2 2 1 0 0 0 0 0 20 0 2100.0132 H0YNQ5;Q99081;B4DGI9 H0YNQ5 91 110 TCF12 Transcription factor 12 yes no 3 0.00048864 71.946 By MS/MS By MS/MS 1 1 7068400 4128300 2940100 3191 1105 3529 8015;8016 7398;7399 7398 2030 2 LGAPENSGISTLER QRPTPGSRLGAPENSG SGISTLERGQKPPPTP R L G E R G 1 1 1 0 0 0 2 2 0 1 2 0 0 0 1 2 1 0 0 0 0 0 14 0 1442.7365 C9JME2;Q9Y4F1;A0A1B0GV68;M0QYB0 C9JME2 14 27 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 2 6.5284E-72 204.67 By matching By MS/MS 1 1 51395000 26467000 24927000 3192 600 3530 8017;8018 7400 7400 6380 1 LGASNSPGQPNSVK PKIGLSLKLGASNSPG PGQPNSVKRKKLPVDS K L G V K R 1 0 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 14 0 1354.6841 P49756 P49756 672 685 RBM25 RNA-binding protein 25 yes yes 2 2.3408E-72 202.32 By MS/MS By MS/MS 3 3 364020000 157970000 206050000 3193 1727 3531;3532 8019;8020;8021;8022;8023;8024 7401;7402;7403;7404;7405;7406;7407;7408 7402 3240 7 LGASNSPGQPNSVKR PKIGLSLKLGASNSPG GQPNSVKRKKLPVDSV K L G K R K 1 1 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 15 1 1510.7852 P49756 P49756 672 686 RBM25 RNA-binding protein 25 yes yes 2;3 9.091E-21 146.1 By MS/MS By MS/MS 2 2 160220000 86159000 74058000 3194 1727 3533 8025;8026;8027;8028 7409;7410;7411;7412 7410 3240 4 LGDLYEEEMR LKGQGKSRLGDLYEEE DLYEEEMRELRRQVDQ R L G M R E 0 1 0 1 0 0 3 1 0 0 2 0 1 0 0 0 0 0 1 0 0 0 10 0 1253.5598 P08670;B0YJC4;A0A1B0GUA0 P08670 146 155 VIM Vimentin yes no 2 0.01521 72.879 By MS/MS 1 1398700 0 1398700 3195 1546 3534 8029 7413 7413 1 LGDSSLSR RRREEERRLGDSSLSR LGDSSLSRKDSRWGDR R L G S R K 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 0 0 0 8 0 833.4243 Q14152 Q14152 878 885 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0047362 128.91 By MS/MS By MS/MS 2 2 22928000 10319000 12608000 3196 1940 3535 8030;8031;8032;8033 7414;7415;7416;7417 7414 3743 4 LGDVYVNDAFGTAHR AFRASLSKLGDVYVND DAFGTAHRAHSSMVGV K L G H R A 2 1 1 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 1 2 0 0 15 0 1633.7849 P00558;P07205 P00558 157 171 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 yes no 3 1.7842E-23 150.26 By MS/MS By MS/MS 1 1 4658500 2573800 2084700 3197 1513 3536 8034;8035 7418;7419 7419 2 LGEASDSELADADK TSLLRRARLGEASDSE SELADADKASVASEVS R L G D K A 3 0 0 3 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 14 0 1419.6365 H0Y2V6;Q5SW79 H0Y2V6 1072 1085 CEP170 Centrosomal protein of 170 kDa yes no 2 2.185E-14 144.4 By MS/MS By MS/MS 1 1 20886000 11767000 9119200 3198 1006 3537 8036;8037 7420;7421 7421 1837 2 LGEHNIDVLEGNEQFINAAK YKSRIQVRLGEHNIDV EQFINAAKIITHPNFN R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 3 6.034E-10 104.89 By MS/MS By MS/MS 1 1 6009800 3710400 2299300 + 3199 631 3538 8038;8039 7422;7423 7422 2 LGELWEEMALSPR EQTSEQNKLGELWEEM EEMALSPRQQRRQLRK K L G P R Q 1 1 0 0 0 0 3 1 0 0 3 0 1 0 1 1 0 1 0 0 0 0 13 0 1529.7548 Q9NWQ4;G3V5D0;G3V290;G3V553 Q9NWQ4 21 33 GPATCH2L G patch domain-containing protein 2-like yes no 2 0.015703 61.167 By MS/MS 1 1869600 1869600 0 3200 2745 3539 8040 7424;7425 7424 5621 2 LGEWVGLCK IKVDDNKKLGEWVGLC GEWVGLCKIDREGKPR K L G C K I 0 0 0 0 1 0 1 2 0 0 2 1 0 0 0 0 0 1 0 1 0 0 9 0 1060.5376 P25398 P25398 85 93 RPS12 40S ribosomal protein S12 yes yes 2 0.0092684 85.064 By MS/MS By MS/MS 1 1 1301800 773160 528670 3201 1631 3540 8041;8042 7426;7427 7426 2 LGEYEDVSR VIDHSGARLGEYEDVS GEYEDVSRVEKYTISQ R L G S R V 0 1 0 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1066.4931 Q99426;K7EP07;K7EK42;K7EL99 Q99426 95 103 TBCB Tubulin-folding cofactor B yes no 2 5.4002E-06 159.28 By MS/MS By MS/MS 1 1 95985000 48145000 47840000 3202 2547 3541 8043;8044 7428;7429 7429 7860 2 LGEYEDVSRVEK VIDHSGARLGEYEDVS EDVSRVEKYTISQEAY R L G E K Y 0 1 0 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 1 2 0 0 12 1 1422.6991 Q99426;K7EP07;K7EK42 Q99426 95 106 TBCB Tubulin-folding cofactor B yes no 2;3 7.613E-117 234.9 By MS/MS By MS/MS 2 2 301430000 148150000 153290000 3203 2547 3542 8045;8046;8047;8048 7430;7431;7432;7433 7431 7860 4 LGEYEDVSRVEKYTISQEAYDQR VIDHSGARLGEYEDVS SQEAYDQRQDTVRSFL R L G Q R Q 1 2 0 2 0 2 4 1 0 1 1 1 0 0 0 2 1 0 3 2 0 0 23 2 2777.3144 Q99426;K7EP07;K7EK42 Q99426 95 117 TBCB Tubulin-folding cofactor B yes no 3 0.00069813 58.107 By matching By MS/MS 1 1 17324000 7208500 10115000 3204 2547 3543 8049;8050 7434 7434 7860 1 LGFSLTPSK TADKLAIKLGFSLTPS GFSLTPSKGKTSGTTS K L G S K G 0 0 0 0 0 0 0 1 0 0 2 1 0 1 1 2 1 0 0 0 0 0 9 0 948.52803 P38432 P38432 298 306 COIL Coilin yes yes 2 0.0090527 75.566 By MS/MS By matching 1 1 4169000 2400300 1768700 3205 1679 3544 8051;8052 7435 7435 3092 1 LGFSSSPTKK AGWFRFPKLGFSSSPT FSSSPTKKSKSTEDGA K L G K K S 0 0 0 0 0 0 0 1 0 0 1 2 0 1 1 3 1 0 0 0 0 0 10 1 1050.571 Q8IVF2 Q8IVF2 5702 5711 AHNAK2 Protein AHNAK2 yes yes 2 0.011882 70.728 By MS/MS 1 0 0 0 3206 2264 3545 8053 7436 7436 4544;4545 1 LGFVDVQNCISR EQRKRRQRLGFVDVQN DVQNCISR________ R L G S R - 0 1 1 1 1 1 0 1 0 1 1 0 0 1 0 1 0 0 0 2 0 0 12 0 1406.6976 Q14573 Q14573 2660 2671 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 yes yes 2 1.2139E-06 120.6 By MS/MS By matching 1 1 4316300 2807300 1509000 3207 1948 3546 8054;8055 7437 7437 3758 1 LGGLRPESPESLTSVSR TPLRRSRRLGGLRPES ESLTSVSRTRRALVEF R L G S R T 0 2 0 0 0 0 2 2 0 0 3 0 0 0 2 4 1 0 0 1 0 0 17 1 1783.9428 Q9H6F5;H0YG79 Q9H6F5 11 27 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 5.9517E-30 156.51 By MS/MS By MS/MS 2 2 685140000 407410000 277730000 3208 2666 3547 8056;8057;8058;8059 7438;7439;7440;7441;7442;7443 7441 5438 6 LGGPEGPGSPLLAT YRINLQMRLGGPEGPG PGSPLLAT________ R L G A T - 1 0 0 0 0 0 1 4 0 0 3 0 0 0 3 1 1 0 0 0 0 0 14 0 1264.6663 Q9C086 Q9C086 343 356 INO80B INO80 complex subunit B yes yes 2 4.7483E-08 127.52 By MS/MS By MS/MS 1 1 17770000 10461000 7308400 3209 2612 3548 8060;8061 7444;7445;7446;7447 7447 5286 4 LGGPKETPPNGNLSPAPR PLKITKGKLGGPKETP GNLSPAPRLRRDYSYE K L G P R L 1 1 2 0 0 0 1 3 0 0 2 1 0 0 5 1 1 0 0 0 0 0 18 1 1800.9482 P48634 P48634 991 1008 PRRC2A Protein PRRC2A yes yes 2;3 2.4054E-06 100.47 By MS/MS By MS/MS 7 7 106290000 50971000 55318000 3210 1718 3549;3550 8062;8063;8064;8065;8066;8067;8068;8069;8070;8071;8072;8073;8074;8075 7448;7449;7450;7451;7452;7453;7454;7455;7456;7457;7458;7459;7460;7461 7449 14;15 3206 14 LGGSAVISLEGKPL DRCTLAEKLGGSAVIS ISLEGKPL________ K L G P L - 1 0 0 0 0 0 1 3 0 1 3 1 0 0 1 2 0 0 0 1 0 0 14 1 1339.7711 P23528;G3V1A4;E9PK25 P23528 153 166 CFL1 Cofilin-1 yes no 2 0.0069908 67.019 By MS/MS 1 1544700 1544700 0 3211 1625 3551 8076 7462 7462 3003 1 LGGSPTNGNSMAPSSPDSDP AEYLEKLKLGGSPTNG PSSPDSDP________ K L G D P - 1 0 2 2 0 0 0 3 0 0 1 0 1 0 4 5 1 0 0 0 0 0 20 0 1886.7952 Q96G61;Q8NFP7 Q96G61 145 164 NUDT11;NUDT10 Diphosphoinositol polyphosphate phosphohydrolase 3-beta;Diphosphoinositol polyphosphate phosphohydrolase 3-alpha yes no 2 0.011704 65.295 By MS/MS By matching 2 2 13456000 7147000 6308600 3212 2355 3552;3553 8077;8078;8079;8080 7463;7464 7463 316 4726 2 LGGSVLGQIPFLQNCEDEDSDEDDELDSVQHK AGKDGKERLGGSVLGQ ELDSVQHKKQRVKLPS R L G H K K 0 0 1 6 1 3 4 3 1 1 4 1 0 1 1 3 0 0 0 2 0 0 32 0 3587.5846 R4GN16;F5GYK2;Q9NRL3 R4GN16 107 138 STRN4 Striatin-4 yes no 3 0.0056175 46.412 By MS/MS By matching 1 1 24218000 20090000 4128700 3213 863 3554 8081;8082 7465 7465 1553 1 LGHPEALSAGTGSPQPPSFTYAQQR SGSQPNQKLGHPEALS SFTYAQQREKPRVQEK K L G Q R E 3 1 0 0 0 3 1 3 1 0 2 0 0 1 4 3 2 0 1 0 0 0 25 0 2596.267 H0Y2Y8;Q15942;H7C3D3 H0Y2Y8 264 288 ZYX Zyxin yes no 3 0.0006651 57.227 By MS/MS By matching 1 1 6342200 3118100 3224100 3214 1007 3555 8083;8084 7466 7466 7433 1 LGHVVMGNNAVSPYQQVIEK LDAKIDSKLGHVVMGN PYQQVIEKTKSLSFRS K L G E K T 1 0 2 0 0 2 1 2 1 1 1 1 1 0 1 1 0 0 1 4 0 0 20 0 2182.1205 P60228;H0YAW4;E5RGA2 P60228 388 407 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 3 3.0403E-08 88.627 By MS/MS By MS/MS 1 1 6464600 3958800 2505800 3215 1782 3556 8085;8086 7467;7468;7469 7468 3357 3 LGIAVIHGEAQDAESDLVDGRHSPPMVR QSFAERLRLGIAVIHG RHSPPMVRSVAAIHPS R L G V R S 3 2 0 3 0 1 2 3 2 2 2 0 1 0 2 2 0 0 0 3 0 0 28 1 2968.4825 C9K0K7;I3L0S1;E7EPA1;O60256 C9K0K7 205 232 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes no 4 3.4487E-08 80.002 By MS/MS By MS/MS 2 2 98622000 49713000 48909000 3216 627 3557;3558 8087;8088;8089;8090 7470;7471;7472 7472 69 1145 2 LGKSEAPETPMEEEAELVLTEK ELQSGSLRLGKSEAPE AELVLTEKSSGTFLSG R L G E K S 2 0 0 0 0 0 7 1 0 0 3 2 1 0 2 1 2 0 0 1 0 0 22 1 2429.1883 Q5JTH9;A0A087X1U8 Q5JTH9 69 90 RRP12 RRP12-like protein yes no 3 0.004137 54.223 By matching By MS/MS 1 1 11136000 6608100 4527700 3217 2077 3559 8091;8092 7473 7473 6872 1 LGLFVFSQEMVFFSDLK DKTYAGGRLGLFVFSQ MVFFSDLKYECRDS__ R L G L K Y 0 0 0 1 0 1 1 1 0 0 3 1 1 4 0 2 0 0 0 2 0 0 17 0 2006.0223 CON__Q28194;P07996 CON__Q28194 1148 1164 THBS1 Thrombospondin-1 yes no 2 0.0040183 68.44 By MS/MS 1 9013700 9013700 0 + 3218 635 3560 8093 7474 7474 72 1 LGLGLDDESNNQQAAATQSPGDSR NHDHKMEKLGLGLDDE TQSPGDSRRLSIQRCI K L G S R R 3 1 2 3 0 3 1 3 0 0 3 0 0 0 1 3 1 0 0 0 0 0 24 0 2443.1211 Q09472 Q09472 1708 1731 EP300 Histone acetyltransferase p300 yes yes 3 0.0066775 50.924 By MS/MS 1 3113900 0 3113900 3219 1870 3561 8094 7475 7475 3527;6773 1 LGLGTLSSSLSR ACCRDYQRLGLGTLSS TLSSSLSRAKSEPFRI R L G S R A 0 1 0 0 0 0 0 2 0 0 4 0 0 0 0 4 1 0 0 0 0 0 12 0 1189.6667 G5E933;O95248 G5E933 1134 1145 SBF1 Myotubularin-related protein 5 yes no 2 2.1696E-07 127.78 By MS/MS By MS/MS 2 2 65238000 33945000 31293000 3220 988 3562 8095;8096;8097;8098 7476;7477 7477 1800;6493 2 LGLHVTPSNVDQVSTPPAAK FFHIQAQKLGLHVTPS VSTPPAAKKSRI____ K L G A K K 2 0 1 1 0 1 0 1 1 0 2 1 0 0 3 2 2 0 0 3 0 0 20 0 2030.0797 Q9NRL2 Q9NRL2 1533 1552 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 3 8.8817E-09 94.845 By MS/MS By MS/MS 1 1 15951000 8507500 7443800 3221 2721 3563 8099;8100 7478;7479 7478 5561;7064 2 LGLPLLTDCAQPSRPHGSPSR AAPAPTVRLGLPLLTD RPHGSPSRSKPKKKSK R L G S R S 1 2 0 1 1 1 0 2 1 0 4 0 0 0 4 3 1 0 0 0 0 0 21 1 2258.159 U3KQ90;P55199 U3KQ90 292 312 ELL RNA polymerase II elongation factor ELL yes no 3 0.0097356 48.376 By MS/MS By matching 1 1 12924000 7442100 5481400 3222 1775 3564 8101;8102 7480 7480 3345 1 LGMLSPEGTCK NTSVQFLRLGMLSPEG LSPEGTCKAFDTAGNG R L G C K A 0 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 1 0 0 0 0 0 11 0 1191.5628 A0A0U1RQF0;P49327 A0A0U1RQF0 203 213 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 0.0067674 73.435 By MS/MS By MS/MS 2 2 30743000 16474000 14269000 3223 337 3565;3566 8103;8104;8105;8106 7481;7482;7483 7481 35 630 3 LGNAGDVCVPQASPR EGTSPGDRLGNAGDVC CVPQASPRRWRPKINW R L G P R R 2 1 1 1 1 1 0 2 0 0 1 0 0 0 2 1 0 0 0 2 0 0 15 0 1539.7464 Q9H0W5 Q9H0W5 249 263 CCDC8 Coiled-coil domain-containing protein 8 yes yes 2 9.7696E-69 195.89 By MS/MS By MS/MS 1 1 18044000 10502000 7541900 3224 2632 3567 8107;8108 7484;7485 7484 5354 2 LGNPYCSPTLVR EGRARHARLGNPYCSP YCSPTLVRKKAIRSKV R L G V R K 0 1 1 0 1 0 0 1 0 0 2 0 0 0 2 1 1 0 1 1 0 0 12 0 1375.6918 Q6ZV89 Q6ZV89 225 236 SH2D5 SH2 domain-containing protein 5 yes yes 2 0.0084539 69.314 By MS/MS By MS/MS 1 1 9650600 4682100 4968500 3225 2187 3568 8109;8110 7486;7487 7487 4360 2 LGNSGASPSSAGK TLAPVVAKLGNSGASP ASPSSAGK________ K L G G K - 2 0 1 0 0 0 0 3 0 0 1 1 0 0 1 4 0 0 0 0 0 0 13 0 1131.552 Q8IWI9 Q8IWI9 3014 3026 MGA MAX gene-associated protein yes yes 2 0.011108 114.21 By MS/MS By MS/MS 1 1 0 0 0 3226 2268 3569 8111;8112 7488;7489 7488 4549 2 LGPRMPQDGSDDEDEEWPTLEK APRERTTRLGPRMPQD EEWPTLEKAATMTAAG R L G E K A 0 1 0 4 0 1 4 2 0 0 2 1 1 0 3 1 1 1 0 0 0 0 22 1 2543.1122 F8WBL2;Q13895 F8WBL2 89 110 BYSL Bystin yes no 3 1.6064E-10 103.4 By MS/MS By MS/MS 1 1 48002000 23578000 24423000 3227 948 3570 8113;8114 7490;7491 7490 107 1719 2 LGQGVLVQVSPSLVK TRSLKYGKLGQGVLVQ QVSPSLVKRQKTHFHD K L G V K R 0 0 0 0 0 2 0 2 0 0 3 1 0 0 1 2 0 0 0 4 0 0 15 0 1522.9083 Q13868 Q13868 166 180 EXOSC2 Exosome complex component RRP4 yes yes 2 0.00058893 85.006 By MS/MS By MS/MS 1 1 2902600 2103300 799350 3228 1933 3571 8115;8116 7492;7493 7493 3729 2 LGSAEQSSPDLSFLVVK SNSKKLERLGSAEQSS DLSFLVVKNNMGEKHL R L G V K N 1 0 0 1 0 1 1 1 0 0 3 1 0 1 1 4 0 0 0 2 0 0 17 0 1775.9305 D3DP56;A0A0A0MTC0;Q96LW4 D3DP56 124 140 FLJ33167;PRIMPOL DNA-directed primase/polymerase protein yes no 2 1.1845E-21 141.13 By MS/MS By MS/MS 1 1 28124000 14328000 13796000 3229 240 3572 8117;8118 7494;7495 7495 437 2 LGSDLTSAQK EQKQKMRRLGSDLTSA SDLTSAQKEMKTKHKA R L G Q K E 1 0 0 1 0 1 0 1 0 0 2 1 0 0 0 2 1 0 0 0 0 0 10 0 1018.5295 Q08378 Q08378 981 990 GOLGA3 Golgin subfamily A member 3 yes yes 2 0.006494 75.229 By MS/MS By MS/MS 1 1 1847800 0 1847800 3230 1865 3573 8119;8120 7496;7497 7497 3509 2 LGSEIRDSVV VCPRPRVRLGSEIRDS SEIRDSVV________ R L G V V - 0 1 0 1 0 0 1 1 0 1 1 0 0 0 0 2 0 0 0 2 0 0 10 1 1073.5717 J3KNP4;Q9NPR2 J3KNP4 828 837 SEMA4B Semaphorin-4B yes no 2 0.0025486 92.943 By MS/MS By MS/MS 1 1 5405700 2868200 2537500 3231 1225 3574 8121;8122 7498;7499 7499 2217 2 LGSFGSITR GDFLGRERLGSFGSIT GSFGSITRQQEGEASS R L G T R Q 0 1 0 0 0 0 0 2 0 1 1 0 0 1 0 2 1 0 0 0 0 0 9 0 936.50288 Q14315 Q14315 2231 2239 FLNC Filamin-C yes yes 2 0.0095444 74.962 By MS/MS By MS/MS 1 1 89567000 44299000 45267000 3232 1947 3575 8123;8124 7500;7501 7500 3757 2 LGSFSTAAEELAR EELAAAAKLGSFSTAA TAAEELARRPGELARR K L G A R R 3 1 0 0 0 0 2 1 0 0 2 0 0 1 0 2 1 0 0 0 0 0 13 0 1350.6779 H0Y3A3;Q5VWQ8 H0Y3A3 781 793 DAB2IP Disabled homolog 2-interacting protein yes no 2 4.6679E-07 121.28 By MS/MS By MS/MS 1 1 2639500 1237300 1402100 3233 1012 3576 8125;8126 7502;7503 7502 1865;1866 2 LGSGSFGTVYLVSDKK RRYVLQQKLGSGSFGT VYLVSDKKAKRGEELA K L G K K A 0 0 0 1 0 0 0 3 0 0 2 2 0 1 0 3 1 0 1 2 0 0 16 1 1656.8723 D6RGV6;D6RJF7;E9PHI8;Q8NG66 D6RGV6 35 50 NEK11 Serine/threonine-protein kinase Nek11 yes no 3 0.013011 59.294 By MS/MS 1 0 0 0 3234 680 3577 8127 7504 7504 1204;7346 1 LGSGSNGLLR EEVSARLRLGSGSNGL SGSNGLLRRKVSIIET R L G L R R 0 1 1 0 0 0 0 3 0 0 3 0 0 0 0 2 0 0 0 0 0 0 10 0 972.53524 H7C1A0;Q9HC62 H7C1A0 38 47 SENP2 Sentrin-specific protease 2 yes no 2 0.0011779 105.36 By MS/MS By MS/MS 1 1 11800000 5058100 6742000 3235 1168 3578 8128;8129 7505;7506 7506 2122 2 LGSLSAR LAQPRRTRLGSLSARS RLGSLSARSDSEATIS R L G A R S 1 1 0 0 0 0 0 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 7 0 702.40244 H0Y2V6;Q5SW79;H0Y4T4;Q00G26 H0Y2V6 1122 1128 CEP170;PLIN5 Centrosomal protein of 170 kDa;Perilipin-5 yes no 2 0.0037488 120.87 By MS/MS By MS/MS 1 1 21261000 11672000 9588400 3236 1006 3579 8130;8131 7507;7508 7507 1838;1839 2 LGSLSARSDSEATISR LAQPRRTRLGSLSARS DSEATISRSSASSRTA R L G S R S 2 2 0 1 0 0 1 1 0 1 2 0 0 0 0 5 1 0 0 0 0 0 16 1 1648.838 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1122 1137 CEP170 Centrosomal protein of 170 kDa yes no 2;3 1.393E-23 151.16 By MS/MS By MS/MS 2 2 165660000 86611000 79051000 3237 1006 3580 8132;8133;8134;8135 7509;7510;7511;7512;7513;7514 7510 1838;1839;1840 6 LGSPDYGNSALLSLPGYRPTTR SSTQSLARLGSPDYGN PGYRPTTRSSARRSQA R L G T R S 1 2 1 1 0 0 0 3 0 0 4 0 0 0 3 3 2 0 2 0 0 0 22 1 2334.1968 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1844 1865 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0013884 58.373 By matching By MS/MS 1 1 31086000 19227000 11859000 3238 95 3581 8136;8137 7515 7515 174 1 LGSPGAPQQEDAMDDKELIEYFK ________________ KELIEYFKSQMKEDPD R L G F K S 2 0 0 3 0 2 3 2 0 1 2 2 1 1 2 1 0 0 1 0 0 0 23 1 2580.2054 H0YGG4 H0YGG4 5 27 EIF2B1 yes yes 3 0.0032503 53.097 By MS/MS By MS/MS 1 1 20329000 10921000 9408500 3239 1072 3582 8138;8139 7516;7517 7517 1983 2 LGSPLAVDEALR SQSDTKDRLGSPLAVD LAVDEALRRSDLVEEF R L G L R R 2 1 0 1 0 0 1 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 12 0 1239.6823 Q7RTP6 Q7RTP6 1308 1319 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 2 0.009999 67.234 By MS/MS By MS/MS 1 1 7748800 4752000 2996900 3240 2205 3583 8140;8141 7518;7519 7519 4395 2 LGSPVDNLEDMDRDDLTDDSVFTR ERRRLSDRLGSPVDNL TDDSVFTRSSQCSRGL R L G T R S 0 2 1 7 0 0 1 1 0 0 3 0 1 1 1 2 2 0 0 2 0 0 24 1 2724.2185 Q5VUA4 Q5VUA4 171 194 ZNF318 Zinc finger protein 318 yes yes 3 0.0017057 55.852 By MS/MS By MS/MS 1 1 22580000 14102000 8478000 3241 2116 3584 8142;8143 7520;7521 7520 4197 2 LGSQHSPGR DYMTSPARLGSQHSPG GSQHSPGRTASLNQRP R L G G R T 0 1 0 0 0 1 0 2 1 0 1 0 0 0 1 2 0 0 0 0 0 0 9 0 937.47298 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 220 228 ABI1 Abl interactor 1 yes no 2 0.01531 67.879 By MS/MS By matching 1 1 63630000 39431000 24199000 3242 201 3585 8144;8145 7522 7522 366 1 LGSSGLGSASSIQAAVR KKAKQTGRLGSSGLGS SSIQAAVRQLEAEADA R L G V R Q 3 1 0 0 0 1 0 3 0 1 2 0 0 0 0 5 0 0 0 1 0 0 17 0 1559.8267 Q7Z6Z7;H0Y659 Q7Z6Z7 3750 3766 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 2 1.1696E-29 157.07 By MS/MS By MS/MS 2 2 33498000 19154000 14344000 3243 2226 3586 8146;8147;8148;8149 7523;7524;7525 7523 4461;4462;4463 2 LGSSSNLQFK NSLPSSARLGSSSNLQ SSSNLQFKAERIKIPS R L G F K A 0 0 1 0 0 1 0 1 0 0 2 1 0 1 0 3 0 0 0 0 0 0 10 0 1079.5611 A0A0J9YYG8;A0A0A0MSL1;Q8TDM6 A0A0J9YYG8 280 289 DLG5 Disks large homolog 5 yes no 2 0.00062011 108.98 By MS/MS By matching 1 1 4827400 2442500 2384900 3244 219 3587 8150;8151 7526 7526 402 1 LGSVDSFER GANRMRGRLGSVDSFE GSVDSFERSNSLASEK R L G E R S 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 9 0 1008.4876 O60343;Q5JU47 O60343 586 594 TBC1D4 TBC1 domain family member 4 yes no 2 0.0017121 122.69 By MS/MS By MS/MS 2 2 95156000 49603000 45553000 3245 1407 3588;3589 8152;8153;8154;8155 7527;7528;7529;7530 7527 2589;2590 4 LGSVEAPK RKRAAKRRLGSVEAPK LGSVEAPKTNKSPEAK R L G P K T 1 0 0 0 0 0 1 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 8 0 799.44397 P46087;F5H5X6;F5H359;F5GWB7;F5H709 P46087 56 63 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 2 0.014811 79.489 By matching By MS/MS 1 1 10956000 5848400 5107700 3246 1707 3590 8156;8157 7531 7531 3157 1 LGSYSGPTSVSR AEGTRRDRLGSYSGPT SGPTSVSRQRVESLRK R L G S R Q 0 1 0 0 0 0 0 2 0 0 1 0 0 0 1 4 1 0 1 1 0 0 12 0 1209.599 V9GYZ0;Q9BZ23 V9GYZ0 64 75 PANK2 Pantothenate kinase 2, mitochondrial yes no 2 3.8519E-15 164.22 By MS/MS By MS/MS 1 1 82173000 44014000 38159000 3247 2607 3591 8158;8159 7532;7533 7532 5278 2 LGTAQSNYLPMVVVR LPDGTYVKLGTAQSNY YLPMVVVRVELLSGEI K L G V R V 1 1 1 0 0 1 0 1 0 0 2 0 1 0 1 1 1 0 1 3 0 0 15 0 1646.8814 C9J0G0;Q99424 C9J0G0 269 283 ACOX2 Acyl-coenzyme A oxidase;Peroxisomal acyl-coenzyme A oxidase 2 yes no 2 0.025573 47.894 By MS/MS 1 0 0 0 3248 550 3592 8160 7534 7534 7309 1 LGTLNGSQEEMWQK EDSISNLKLGTLNGSQ SQEEMWQKTETVKQEN K L G Q K T 0 0 1 0 0 2 2 2 0 0 2 1 1 0 0 1 1 1 0 0 0 0 14 0 1619.7614 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6 H0YDJ4 1035 1048 NIN Ninein yes no 2 0.0032175 75.02 By MS/MS By MS/MS 2 2 10202000 5561700 4640600 3249 546 3593;3594 8161;8162;8163;8164 7535;7536 7535 997 2 LGTSESLPCTAEELSR LASGHSVRLGTSESLP CTAEELSRSTTELLPR R L G S R S 1 1 0 0 1 0 3 1 0 0 3 0 0 0 1 3 2 0 0 0 0 0 16 0 1748.8251 B4DTS2;Q9BZL6 B4DTS2 209 224 PRKD2 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2 yes no 2 0.00019685 92.211 By matching By MS/MS 1 1 52713000 28470000 24243000 3250 491 3595 8165;8166 7537 7537 925 1 LGVSVSPSR RSKSPKKKLGVSVSPS GVSVSPSRARRRRKTS K L G S R A 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 3 0 0 0 2 0 0 9 0 900.50288 E7ERS3;Q86VM9;H3BP01 E7ERS3 553 561 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.0018764 118.9 By MS/MS By MS/MS 2 2 333910000 166430000 167480000 3251 727 3596;3597 8167;8168;8169;8170 7538;7539;7540;7541;7542 7540 1300;1301;1302 5 LGVSVSPSRAR RSKSPKKKLGVSVSPS SVSPSRARRRRKTSAS K L G A R R 1 2 0 0 0 0 0 1 0 0 1 0 0 0 1 3 0 0 0 2 0 0 11 1 1127.6411 E7ERS3;Q86VM9;H3BP01 E7ERS3 553 563 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2;3 0.00042742 110.15 By MS/MS By MS/MS 2 2 86307000 50560000 35746000 3252 727 3598 8171;8172;8173;8174 7543;7544;7545 7543 1300;1301;1302 3 LGYDTGPSDTQGVLGPSPPQSFPQ VVTKDMRKLGYDTGPS SPPQSFPQ________ K L G P Q - 0 0 0 2 0 3 0 4 0 0 2 0 0 1 5 3 2 0 1 1 0 0 24 0 2444.1496 Q9UPM9 Q9UPM9 181 204 B9D1 B9 domain-containing protein 1 yes yes 3 0.0095425 54.441 By MS/MS 1 1901600 1901600 0 3253 2867 3599 8175 7546 7546 5908;7945 0 LGYLVSPPQQIR PGWEHSNKLGYLVSPP VSPPQQIRRGERSCYR K L G I R R 0 1 0 0 0 2 0 1 0 1 2 0 0 0 2 1 0 0 1 1 0 0 12 0 1369.7718 Q7Z6E9;H3BSK8 Q7Z6E9 511 522 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2 0.0010734 101.53 By MS/MS By MS/MS 2 1 4878000 2627300 2250700 3254 2224 3600 8176;8177;8178 7547;7548;7549 7549 4452 3 LHGGFDSDCSEDGEALNGEPELDLTSK RAAAAAARLHGGFDSD PELDLTSKLVLVSPTS R L H S K L 1 0 1 4 1 0 4 4 1 0 4 1 0 1 1 3 1 0 0 0 0 0 27 0 2891.2403 O00178;F8WAZ4 O00178 38 64 GTPBP1 GTP-binding protein 1 yes no 3 1.1194E-07 78.122 By MS/MS By matching 1 1 15584000 9242100 6341600 3255 1322 3601 8179;8180 7550 7550 2382 1 LHKRDSFDNCSLGESSK RTRNAIKRLHKRDSFD CSLGESSKIGISDISS R L H S K I 0 1 1 2 1 0 1 1 1 0 2 2 0 1 0 4 0 0 0 0 0 0 17 2 1978.9167 Q5UIP0 Q5UIP0 1683 1699 RIF1 Telomere-associated protein RIF1 yes yes 3 0.0016163 69.805 By matching By MS/MS 1 1 10481000 4875300 5605600 3256 2112 3602 8181;8182 7551 7551 4176 1 LHPDGSPDVAGEK RLNVKAQKLHPDGSPD SPDVAGEKGIQKIPSG K L H E K G 1 0 0 2 0 0 1 2 1 0 1 1 0 0 2 1 0 0 0 1 0 0 13 0 1320.631 Q7Z2Z1 Q7Z2Z1 594 606 TICRR Treslin yes yes 2 0.0028563 82.483 By MS/MS By matching 1 1 14646000 6408700 8237300 3257 2207 3603 8183;8184 7552 7552 4399 1 LHPYITVFG NKYSKQMRLHPYITVF HPYITVFG________ R L H F G - 0 0 0 0 0 0 0 1 1 1 1 0 0 1 1 0 1 0 1 1 0 0 9 0 1045.5597 O60245 O60245 1061 1069 PCDH7 Protocadherin-7 yes yes 2 0.018216 59.205 By MS/MS By matching 1 1 2668000 1276200 1391900 3258 1399 3604 8185;8186 7553 7553 7526 1 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK IPQPDLTKLHQLAMQQ ESSSPEVKGYWGLDAS K L H V K G 1 0 1 0 0 3 2 3 3 1 2 1 2 2 2 5 2 0 0 1 0 0 31 0 3381.587 Q15366;H3BRU6;F8VZX2;F8VRH0 Q15366 246 276 PCBP2 Poly(rC)-binding protein 2 yes no 4 0.00010769 59.083 By MS/MS By MS/MS 1 3 106800000 35588000 71208000 3259 1985 3605;3606 8187;8188;8189;8190 7554;7555;7556;7557;7558 7556 270 3876;3877;3878 5 LHQLSGSDQLESTAHSR MEHLERTKLHQLSGSD LESTAHSRIRKERPIS K L H S R I 1 1 0 1 0 2 1 1 2 0 3 0 0 0 0 4 1 0 0 0 0 0 17 0 1864.9028 A0A087X2D8;O60271 A0A087X2D8 179 195 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 3 0.00013268 81.017 By MS/MS By MS/MS 1 1 12747000 5966900 6779800 3260 148 3607 8191;8192 7559;7560 7560 255;256 2 LHSYSSPSTK GGGSSSSRLHSYSSPS SYSSPSTKNSSGGGES R L H T K N 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 4 1 0 1 0 0 0 10 0 1105.5404 A0A087WWP4;Q96T37 A0A087WWP4 79 88 RBM15 Putative RNA-binding protein 15 yes no 2 0.0076495 73.951 By MS/MS By MS/MS 1 2 10640000 3297200 7343000 3261 81 3608 8193;8194;8195 7561;7562 7562 149;150 2 LHVGNISPTCTNK NKSKTSTKLHVGNISP ISPTCTNKELRAKFEE K L H N K E 0 0 2 0 1 0 0 1 1 1 1 1 0 0 1 1 2 0 0 1 0 0 13 0 1439.7191 Q9BWF3;E9PB51;D6R9K7;J3QRR5 Q9BWF3 80 92 RBM4 RNA-binding protein 4 yes no 2;3 2.1659E-12 153.14 By MS/MS By MS/MS 2 2 47381000 26473000 20907000 3262 2591 3609 8196;8197;8198;8199 7563;7564;7565 7564 5246 2 LHVGNISPTCTNKELR NKSKTSTKLHVGNISP TCTNKELRAKFEEYGP K L H L R A 0 1 2 0 1 0 1 1 1 1 2 1 0 0 1 1 2 0 0 1 0 0 16 1 1837.9469 Q9BWF3;E9PB51;D6R9K7;J3QRR5 Q9BWF3 80 95 RBM4 RNA-binding protein 4 yes no 3 0.025201 45.54 By MS/MS By MS/MS 1 1 11826000 7178900 4647500 3263 2591 3610 8200;8201 7566;7567 7566 5246 2 LHVGNISPTCTNQELR NKSKASTKLHVGNISP TCTNQELRAKFEEYGP K L H L R A 0 1 2 0 1 1 1 1 1 1 2 0 0 0 1 1 2 0 0 1 0 0 16 0 1837.9105 Q9BQ04;E9PLB0;E9PM61;U3KQD5 Q9BQ04 80 95 RBM4B RNA-binding protein 4B yes no 3 0.011303 51.695 By MS/MS By MS/MS 1 1 5907000 3108900 2798000 3264 2568 3611 8202;8203 7568;7569 7569 5183 2 LHYTPPLQSPIIDNDPLLGQSPWR RFFMTPPRLHYTPPLQ LLGQSPWRSKISGSDT R L H W R S 0 1 1 2 0 2 0 1 1 2 4 0 0 0 5 2 1 1 1 0 0 0 24 0 2756.4286 H0Y322;Q5TKA1;C9J5J4;H7C4T7 H0Y322 372 395 LIN9 Protein lin-9 homolog yes no 3 1.0091E-13 98.887 By MS/MS By matching 1 1 39190000 36523000 2667500 3265 1008 3612 8204;8205 7570 7570 1858 1 LIALLEVLSQK TDLSDGLRLIALLEVL LLEVLSQKKMHRKHNQ R L I Q K K 1 0 0 0 0 1 1 0 0 1 4 1 0 0 0 1 0 0 0 1 0 0 11 0 1225.7646 O75369;F8WE98;Q5HY54;Q60FE5;P21333;A0A087WWY3;Q14315 Q5HY54 77 87 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C no no 2 0.0098779 75.294 By matching By MS/MS 1 1 2596200 1294800 1301400 3266 1613;1434;1947 3613 8206;8207 7571 7571 1 LIAPVAEEEATVPNNK ________________ EATVPNNKITVVGVGQ K L I N K I 3 0 2 0 0 0 3 0 0 1 1 1 0 0 2 0 1 0 0 2 0 0 16 0 1693.8887 P07195;A8MW50;F5H793;C9J7H8 P07195 8 23 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 2;3 0.00017793 107.09 By MS/MS By MS/MS 1 2 26612000 13632000 12980000 3267 1535 3614 8208;8209;8210 7572;7573;7574 7573 3 LIASSPTLISGITSPPLLDSIK PTTTSQSRLIASSPTL PPLLDSIKTIQGHGLL R L I I K T 1 0 0 1 0 0 0 1 0 4 4 1 0 0 3 5 2 0 0 0 0 0 22 0 2222.2774 F5H055;Q5T0B9 F5H055 143 164 ZNF362 Zinc finger protein 362 yes no 2 0.0039931 57.328 By MS/MS By matching 1 1 16967000 13960000 3006800 3268 871 3615 8211;8212 7575 7575 1566;6465 1 LICCDILDVLDK QMVETELKLICCDILD DILDVLDKHLIPAANT K L I D K H 0 0 0 3 2 0 0 0 0 2 3 1 0 0 0 0 0 0 0 1 0 0 12 0 1475.7364 P62258;K7EIT4 P62258 95 106 YWHAE 14-3-3 protein epsilon yes no 2 4.0738E-11 155.11 By MS/MS By MS/MS 1 1 20179000 11485000 8694200 3269 1793 3616 8213;8214 7576;7577 7577 2 LIDLESPTPESQK TIEEDLKKLIDLESPT SPTPESQKSFKFHALS K L I Q K S 0 0 0 1 0 1 2 0 0 1 2 1 0 0 2 2 1 0 0 0 0 0 13 0 1455.7457 O43166;F5GYF8 O43166 1544 1556 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 2.1785E-97 222.56 By MS/MS By MS/MS 1 1 27675000 15043000 12631000 3270 1372 3617 8215;8216 7578;7579 7579 2512 2 LIDLHSPSEIVK FQMRIHKRLIDLHSPS HSPSEIVKQITSISIE R L I V K Q 0 0 0 1 0 0 1 0 1 2 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1349.7555 P60866;G3XAN0 P60866 88 99 RPS20 40S ribosomal protein S20 yes no 3 0.0010862 107.11 By MS/MS By MS/MS 1 1 908100 0 908100 3271 1787 3618 8217;8218 7580;7581 7580 2 LIEDNEYTAR IADFGLARLIEDNEYT EDNEYTARQGAKFPIK R L I A R Q 1 1 1 1 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1222.583 J3QRU1;P07947;Q573B4;P06239;P06241;P12931 P06241 425 434 YES1;LCK;FYN;SRC Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Yes;Tyrosine-protein kinase Lck;Tyrosine-protein kinase Fyn;Proto-oncogene tyrosine-protein kinase Src no no 2 1.9139E-40 191.17 By MS/MS By MS/MS 2 2 571120000 302650000 268470000 3272 1257;1529;1573 3619;3620 8219;8220;8221;8222 7582;7583;7584;7585 7583 7479 4 LIEDNEYTARQGAK IADFGLARLIEDNEYT YTARQGAKFPIKWTAP R L I A K F 2 1 1 1 0 1 2 1 0 1 1 1 0 0 0 0 1 0 1 0 0 0 14 1 1606.7951 J3QRU1;P07947;P06241;P12931 P06241 425 438 YES1;FYN;SRC Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Yes;Tyrosine-protein kinase Fyn;Proto-oncogene tyrosine-protein kinase Src no no 2 2.0027E-21 163.45 By MS/MS By MS/MS 1 1 52676000 30123000 22553000 3273 1257;1529;1573 3621 8223;8224 7586;7587 7586 7479 2 LIEGVHPGSLVEKLPDSPALAK MTSNGSHRLIEGVHPG PDSPALAKKALLALNH R L I A K K 2 0 0 1 0 0 2 2 1 1 4 2 0 0 3 2 0 0 0 2 0 0 22 1 2269.2682 H0YDB2;E9PNJ4;Q13586;G0XQ39 H0YDB2 321 342 STIM1 Stromal interaction molecule 1 yes no 3 1.6409E-06 84.249 By MS/MS By MS/MS 1 1 13558000 7501900 6055800 3274 832 3622 8225;8226 7588;7589 7589 1503 2 LIESLSPDFCHQNK LNKANRKKLIESLSPD PDFCHQNKGLLLTVNT K L I N K G 0 0 1 1 1 1 1 0 1 1 2 1 0 1 1 2 0 0 0 0 0 0 14 0 1686.8036 Q9H6R7 Q9H6R7 463 476 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes yes 3 0.0014435 75.574 By MS/MS By matching 1 1 4722400 2105400 2617000 3275 2668 3623 8227;8228 7590 7590 5445 1 LIEVDDER FPATGCQKLIEVDDER LIEVDDERKLRTFYEK K L I E R K 0 1 0 2 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 987.48729 P62753;A2A3R7 P62753 15 22 RPS6 40S ribosomal protein S6 yes no 2 0.021169 84.568 By MS/MS By matching 1 1 13086000 6090600 6995100 3276 1800 3624 8229;8230 7591 7591 1 LIFAGKQLEDGR GIPPDQQRLIFAGKQL GKQLEDGRTLSDYNIQ R L I G R T 1 1 0 1 0 1 1 2 0 1 2 1 0 1 0 0 0 0 0 0 0 0 12 1 1345.7354 M0R1V7;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5PY61;Q96C32;P62987;P62979;P0CG47;P0CG48;F5GZ39;M0R1M6;M0R2S1 M0R1V7 43 54 UBA52;UBB;RPS27A;UBC Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 3 0.007278 89.805 By MS/MS 1 1236200 1236200 0 3277 494 3625 8231 7592 7592 1 LIGTAVPQRTSPTGPK QIFNKSKKLIGTAVPQ RTSPTGPKNMQTSGRL K L I P K N 1 1 0 0 0 1 0 2 0 1 1 1 0 0 3 1 3 0 0 1 0 0 16 1 1621.9152 C9JB30;Q9UPY8 C9JB30 152 167 MAPRE3 Microtubule-associated protein RP/EB family member 3 yes no 2;3 0.00099721 71.685 By MS/MS By MS/MS 2 2 34276000 20141000 14136000 3278 582 3626 8232;8233;8234;8235 7593;7594;7595 7595 1063;6376 2 LIHTLDDRTQLWASEPGTPPLPTSLPSQNPILK NDIKLAAKLIHTLDDR PSQNPILKNITDYLIE K L I L K N 1 1 1 2 0 2 1 1 1 2 6 1 0 0 6 3 4 1 0 0 0 0 33 1 3634.9359 Q9BXP5;H7C3A1 Q9BXP5 527 559 SRRT Serrate RNA effector molecule homolog yes no 4 0.0022668 47.757 By MS/MS 1 20323000 20323000 0 3279 2599 3627 8236 7596 7596 7032;7033 1 LIIESPSNTSSTEPA WKELIDPRLIIESPSN NTSSTEPA________ R L I P A - 1 0 1 0 0 0 2 0 0 2 1 0 0 0 2 4 2 0 0 0 0 0 15 0 1544.757 P38432 P38432 562 576 COIL Coilin yes yes 2 0.0083307 62.042 By MS/MS By matching 1 1 27241000 14557000 12684000 3280 1679 3628 8237;8238 7597 7597 3093 1 LILSPKEK EPDGLKMKLILSPKEK LILSPKEKGSSSVDEE K L I E K G 0 0 0 0 0 0 1 0 0 1 2 2 0 0 1 1 0 0 0 0 0 0 8 1 926.58007 Q9UGU5;B0QXZ8;B0QXZ9 Q9UGU5 194 201 HMGXB4 HMG domain-containing protein 4 yes no 2 0.01626 83.869 By MS/MS By matching 1 1 11534000 5422600 6111400 3281 2811 3629 8239;8240 7598 7598 5766 1 LINGVRSPQTRQAGQTR IFNFTADRLINGVRSP TRQAGQTRTRIQNPSA R L I T R T 1 3 1 0 0 3 0 2 0 1 1 0 0 0 1 1 2 0 0 1 0 0 17 2 1881.0293 H0Y4V9;Q92615 H0Y4V9 11 27 LARP4B La-related protein 4B yes no 3 0.0082939 51.31 By MS/MS By matching 1 1 29489000 16899000 12590000 3282 1020 3630 8241;8242 7599 7599 6509;6510 1 LIPGPLSPVAR SKEPLKEKLIPGPLSP GPLSPVARGGSNGGSN K L I A R G 1 1 0 0 0 0 0 1 0 1 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1118.6812 P48634 P48634 1213 1223 PRRC2A Protein PRRC2A yes yes 2 0.0013783 98.407 By MS/MS By MS/MS 1 1 526420000 268590000 257840000 3283 1718 3631 8243;8244 7600;7601;7602 7601 3213 3 LIPITGGNARSPEDQLGK EETEIHWKLIPITGGN SPEDQLGKHGEKQTPG K L I G K H 1 1 1 1 0 1 1 3 0 2 2 1 0 0 2 1 1 0 0 0 0 0 18 1 1865.0007 Q9UK61 Q9UK61 917 934 FAM208A Protein FAM208A yes yes 2;3 0.0043859 61.87 By MS/MS By matching 2 2 31348000 16806000 14542000 3284 2826 3632 8245;8246;8247;8248 7603;7604 7604 5813 2 LIRDFQEYVEPGEDFPASPQRR EMKQMEQKLIRDFQEY FPASPQRRNTASQEDK K L I R R N 1 3 0 2 0 2 3 1 0 1 1 0 0 2 3 1 0 0 1 1 0 0 22 2 2648.2983 Q9Y6G9;C9JGM7 Q9Y6G9 190 211 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 3 1.5476E-08 86.189 By MS/MS By matching 1 1 63430000 32385000 31045000 3285 2947 3633 8249;8250 7605 7605 6122 1 LIRGPGENGDDS GGKRGHKRLIRGPGEN PGENGDDS________ R L I D S - 0 1 1 2 0 0 1 3 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1228.5684 Q6IBS0 Q6IBS0 338 349 TWF2 Twinfilin-2 yes yes 2 3.0832E-48 193.49 By MS/MS By MS/MS 2 3 43992000 22385000 21607000 3286 2142 3634;3635 8251;8252;8253;8254;8255 7606;7607;7608;7609;7610;7611 7609 21 4258 6 LIRPEYAWIVQPVSGAVYDRPGASPK LAALNCLRLIRPEYAW DRPGASPKRNHDGECT R L I P K R 3 2 0 1 0 1 1 2 0 2 1 1 0 0 4 2 0 1 2 3 0 0 26 2 2868.5286 G3V198;Q12769 G3V198 1099 1124 NUP160 Nuclear pore complex protein Nup160 yes no 3;4 1.5386E-05 73.11 By MS/MS By MS/MS 2 2 49753000 40801000 8952800 3287 958 3636 8256;8257;8258;8259 7612;7613;7614;7615 7612 1741;1742 4 LISDKIGSLGLGTGEDDDYVDDFNSTSHR NTVLKDLKLISDKIGS DFNSTSHRSEKSEISI K L I H R S 0 1 1 6 0 0 1 4 1 2 3 1 0 1 0 4 2 0 1 1 0 0 29 1 3125.4425 O95684;A0A087WV25 O95684 319 347 FGFR1OP FGFR1 oncogene partner yes no 3 3.7893E-28 117.08 By MS/MS By MS/MS 1 1 30972000 19008000 11964000 3288 1496 3637 8260;8261 7616;7617 7617 6647;7543 2 LISGEEHFSSK CRSQPPARLISGEEHF GEEHFSSKKCLAWFYE R L I S K K 0 0 0 0 0 0 2 1 1 1 1 1 0 1 0 3 0 0 0 0 0 0 11 0 1232.6037 E9PQV9;Q9BTE7;H0YCN4 E9PQV9 39 49 DCUN1D5 DCN1-like protein;DCN1-like protein 5 yes no 2 0.0094323 85.672 By MS/MS By MS/MS 1 1 8519600 4540300 3979300 3289 839 3638 8262;8263 7618;7619 7619 1517 1 LISPLASPADGVK SPPPIEIRLISPLASP ASPADGVKSKPRKTTE R L I V K S 2 0 0 1 0 0 0 1 0 1 2 1 0 0 2 2 0 0 0 1 0 0 13 0 1266.7184 Q8WYP5 Q8WYP5 2220 2232 AHCTF1 Protein ELYS yes yes 2 0.00094103 95.822 By MS/MS By MS/MS 1 1 4420100 2025800 2394400 3290 2417 3639 8264;8265 7620;7621 7620 4852;4853 2 LISWYDNEFGYSNR ALNDHFVKLISWYDNE NEFGYSNRVVDLMAHM K L I N R V 0 1 2 1 0 0 1 1 0 1 1 0 0 1 0 2 0 1 2 0 0 0 14 0 1762.7951 P04406;E7EUT5 P04406 310 323 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.0014288 104.24 By MS/MS By MS/MS 1 1 15973000 8203800 7769200 3291 1522 3640 8266;8267 7622;7623 7623 2 LITEDVQGK EVAFRKFKLITEDVQG ITEDVQGKNCLTNFHG K L I G K N 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1001.5393 D6RAT0;P61247;D6RG13;D6RGE0;D6RED7;D6RAS7;H0Y8L7;D6RB09;E9PFI5 D6RAT0 49 57 RPS3A 40S ribosomal protein S3a yes no 2 0.005443 98.458 By MS/MS By MS/MS 1 1 9370900 4464700 4906200 3292 652 3641 8268;8269 7624;7625;7626 7625 3 LITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGR ETVADTRRLITKPQNL PQTVGVGRGRFTTYEI R L I G R G 1 1 4 2 0 2 1 3 0 2 3 1 0 1 4 2 2 0 1 3 0 0 33 1 3552.8213 O60493 O60493 11 43 SNX3 Sorting nexin-3 yes yes 3 0.0061058 44.452 By MS/MS By matching 1 1 13380000 9983500 3396200 3293 1411 3642 8270;8271 7627 7627 7528 1 LIVENLSSR PPVRTEYRLIVENLSS IVENLSSRCSWQDLKD R L I S R C 0 1 1 0 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 9 0 1029.5819 Q13247;B4DJK0;B4DUA4;A0A0D9SEM4;Q13243;Q08170 Q13247 112 120 SRSF6;SRSF5;SRSF4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5;Serine/arginine-rich splicing factor 4 yes no 2 0.0047112 104.07 By MS/MS By MS/MS 1 1 8055700 4076100 3979600 3294 1907 3643 8272;8273 7628;7629 7628 3647;3648 2 LIYVSER ACSLQEEKLIYVSERT KLIYVSERTELPMKHQ K L I E R T 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 7 0 878.48617 Q9BYI3 Q9BYI3 491 497 FAM126A Hyccin yes yes 2 0.018845 70.912 By MS/MS 1 1480100 0 1480100 3295 2606 3644 8274 7630 7630 7878 1 LKATVTPSPVK EKKMPKPRLKATVTPS TVTPSPVKGKGKVGRP R L K V K G 1 0 0 0 0 0 0 0 0 0 1 2 0 0 2 1 2 0 0 2 0 0 11 1 1139.6914 Q9H1E3 Q9H1E3 174 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 9.9184E-08 155.43 By MS/MS By MS/MS 3 3 604550000 339430000 265120000 3296 2637 3645;3646 8275;8276;8277;8278;8279;8280 7631;7632;7633;7634;7635;7636;7637;7638;7639 7632 5371;7046;7047 9 LKATVTPSPVKGK EKKMPKPRLKATVTPS TPSPVKGKGKVGRPTA R L K G K G 1 0 0 0 0 0 0 1 0 0 1 3 0 0 2 1 2 0 0 2 0 0 13 2 1324.8078 Q9H1E3 Q9H1E3 174 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 2.8881E-15 160.03 By MS/MS By MS/MS 4 4 1089900000 555410000 534520000 3297 2637 3647;3648 8281;8282;8283;8284;8285;8286;8287;8288 7640;7641;7642;7643;7644;7645;7646;7647;7648 7645 5371;7046;7047 9 LKCGSGPVHISGQHLVAVEEDAESEDEEEEDVK ITPPVVLRLKCGSGPV DEEEEDVKLLSISGKR R L K V K L 2 0 0 3 1 1 8 3 2 1 2 2 0 0 1 3 0 0 0 4 0 0 33 1 3620.6424 P06748;E5RI98 P06748 102 134 NPM1 Nucleophosmin no no 4 7.1875E-06 66.786 By MS/MS By MS/MS 1 1 118900000 41464000 77441000 3298 1533;699 3649 8289;8290 7649;7650;7651 7651 1237 3 LKDDEVAQLK LTSVINQKLKDDEVAQ DDEVAQLKKSADTLWD K L K L K K 1 0 0 2 0 1 1 0 0 0 2 2 0 0 0 0 0 0 0 1 0 0 10 1 1157.6292 P07195 P07195 309 318 LDHB L-lactate dehydrogenase B chain yes yes 3 0.010365 83.862 By MS/MS 1 1124800 0 1124800 3299 1535 3650 8291 7652 7652 1 LKDLFDYSPPLHK PEQVKSEKLKDLFDYS DYSPPLHKNLDAREKS K L K H K N 0 0 0 2 0 0 0 0 1 0 3 2 0 1 2 1 0 0 1 0 0 0 13 1 1571.8348 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 505 517 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 9.1816E-16 160.03 By MS/MS By MS/MS 2 2 173900000 71323000 102570000 3300 2759 3651 8292;8293;8294;8295 7653;7654;7655;7656;7657;7658;7659;7660;7661 7659 5644 9 LKDLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI KILSLKNKLKDLGHPV PGKDLDHI________ K L K H I - 0 0 0 9 0 1 9 3 2 1 4 2 0 0 2 2 0 0 0 1 0 0 36 2 4076.7254 O60763 O60763 927 962 USO1 General vesicular transport factor p115 yes yes 4 2.3972E-20 90.041 By MS/MS By MS/MS 1 1 532550000 277350000 255200000 3301 1420 3652 8296;8297 7662;7663 7663 2613 2 LKEDILENEDEQNSPPK QQWPEEKRLKEDILEN DEQNSPPKKGKRGRPP R L K P K K 0 0 2 2 0 1 4 0 0 1 2 2 0 0 2 1 0 0 0 0 0 0 17 1 1996.9589 Q9NTI5;A9IYQ1 Q9NTI5 1270 1286 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2;3 1.3896E-05 107.09 By MS/MS By matching 2 2 24721000 13836000 10885000 3302 2731 3653 8298;8299;8300;8301 7664;7665 7664 5587 1 LKETCVSGEDPTQGADLSPDEK EPAKELVKLKETCVSG ADLSPDEKVLSKPPEG K L K E K V 1 0 0 3 1 1 3 2 0 0 2 2 0 0 2 2 2 0 0 1 0 0 22 1 2375.0798 Q02952 Q02952 466 487 AKAP12 A-kinase anchor protein 12 yes yes 3 0.0033495 54.304 By MS/MS By matching 1 1 4818000 2748500 2069500 3303 1843 3654 8302;8303 7666 7666 3457 1 LKFSDDEEEEEVVK EEVDYSEKLKFSDDEE EEEEEVVKDGRPKWNS K L K V K D 0 0 0 2 0 0 5 0 0 0 1 2 0 1 0 1 0 0 0 2 0 0 14 1 1694.7887 Q5JSZ5 Q5JSZ5 385 398 PRRC2B Protein PRRC2B yes yes 2 4.9376E-05 117.2 By MS/MS 1 9173700 0 9173700 3304 2074 3655 8304 7667 7667 4082 1 LKGMKDDDYDDQLC FEDFARLRLKGMKDDD DDYDDQLC________ R L K L C - 0 0 0 5 1 1 0 1 0 0 2 2 1 0 0 0 0 0 1 0 0 0 14 2 1714.7178 Q68DZ5;P32121 Q68DZ5 204 217 DKFZp686L0365;ARRB2 Beta-arrestin-2 yes no 2;3 0.00061415 89.171 By MS/MS By MS/MS 3 3 138370000 76873000 61499000 3305 1665 3656;3657 8305;8306;8307;8308;8309;8310 7668;7669;7670;7671;7672 7670 7591 5 LKGQEDSLASAVDAATEQKTCDSD IAELIRERLKGQEDSL EQKTCDSD________ R L K S D - 4 0 0 4 1 2 2 1 0 0 2 2 0 0 0 3 2 0 0 1 0 0 24 2 2538.1392 J3KR35;Q8WUD4 J3KR35 156 179 CCDC12 Coiled-coil domain-containing protein 12 yes no 3 7.5663E-43 139.64 By MS/MS By MS/MS 1 1 235590000 106630000 128950000 3306 1237 3658 8311;8312 7673;7674;7675 7673 2243 3 LKGTSPSSSSRPQR ILFTQFKRLKGTSPSS SSSSRPQRVIEDRDSG R L K Q R V 0 2 0 0 0 1 0 1 0 0 1 1 0 0 2 5 1 0 0 0 0 0 14 2 1486.7852 H3BVG0;Q8N1F7 H3BVG0 763 776 NUP93 Nuclear pore complex protein Nup93 yes no 2 0.022044 62.469 By MS/MS By matching 1 1 17690000 11613000 6077000 3307 1147 3659 8313;8314 7676 7676 1 LKISEEDLTPR RRQLKESKLKISEEDL SEEDLTPRMRQRSNTL K L K P R M 0 1 0 1 0 0 2 0 0 1 2 1 0 0 1 1 1 0 0 0 0 0 11 1 1299.7034 E9PGM7;O94988 E9PGM7 310 320 FAM13A Protein FAM13A yes no 2 0.011664 71.241 By MS/MS By matching 1 1 4645200 2738100 1907100 3308 792 3660 8315;8316 7677 7677 1423 1 LKLEYETQIK TNTEKLQKLKLEYETQ LEYETQIKKMLCSKDS K L K I K K 0 0 0 0 0 1 2 0 0 1 2 2 0 0 0 0 1 0 1 0 0 0 10 1 1263.7075 Q2M2Z5 Q2M2Z5 104 113 KIZ Centrosomal protein kizuna yes yes 2 0.0065635 60.49 By MS/MS 1 10658000 0 10658000 3309 2031 3661 8317 7678 7678 6854;7730 1 LKLSPSPSSR LLEGEEERLKLSPSPS LSPSPSSRVTVSRASS R L K S R V 0 1 0 0 0 0 0 0 0 0 2 1 0 0 2 4 0 0 0 0 0 0 10 1 1070.6084 P20700;Q03252 P20700 388 397 LMNB1;LMNB2 Lamin-B1;Lamin-B2 no no 2 0.010383 89.747 By MS/MS By MS/MS 2 2 272280000 136380000 135910000 3310 1612;1847 3662;3663 8318;8319;8320;8321 7679;7680;7681;7682 7680 2974;2975;2976 4 LKNGFPHPEPDCNPSEAASEESNSEIEQEIPVEQK ETREKSPKLKNGFPHP QEIPVEQKEGAFSNFP K L K Q K E 2 0 3 1 1 2 8 1 1 2 1 2 0 1 5 4 0 0 0 1 0 0 35 1 3934.7803 Q9NR30 Q9NR30 150 184 DDX21 Nucleolar RNA helicase 2 yes yes 3;4 1.0034E-05 60.637 By MS/MS By MS/MS 2 2 155060000 75349000 79712000 3311 2716 3664 8322;8323;8324;8325 7683;7684;7685 7684 28 5544;5545;5546 3 LKPFFEGMSQSSSQTEIGSLNSK ILSTPKPKLKPFFEGM EIGSLNSKGSLGKDTT K L K S K G 0 0 1 0 0 2 2 2 0 1 2 2 1 2 1 6 1 0 0 0 0 0 23 1 2501.2108 Q6VY07 Q6VY07 399 421 PACS1 Phosphofurin acidic cluster sorting protein 1 yes yes 3 0.013473 45.363 By MS/MS By MS/MS 1 1 6364800 3479900 2884900 3312 2173 3665 8326;8327 7686;7687 7686 4342;4343 2 LKPGGVGAPSSSSPSPSPSAR RQLEEEQKLKPGGVGA PSPSPSARPGPPPSEE K L K A R P 2 1 0 0 0 0 0 3 0 0 1 1 0 0 5 7 0 0 0 1 0 0 21 1 1921.9858 Q92797 Q92797 1159 1179 SYMPK Symplekin yes yes 3 0.0013691 66.019 By MS/MS By MS/MS 3 3 70151000 38682000 31470000 3313 2439 3666;3667 8328;8329;8330;8331;8332;8333 7688;7689;7690;7691 7691 4909;4910;4911 4 LKQQVARSEEQNYVPK EVKNENAKLKQQVARS EEQNYVPKFETAQLKD K L K P K F 1 1 1 0 0 3 2 0 0 0 1 2 0 0 1 1 0 0 1 2 0 0 16 2 1916.0116 E7EUJ7;Q8TC20 E7EUJ7 547 562 CAGE1 Cancer-associated gene 1 protein yes no 3 0.020297 42.633 By matching By MS/MS 1 1 62460000 34154000 28305000 3314 739 3668 8334;8335 7692 7692 1332;7369 1 LKSDERPVHIK FIQPRRKRLKSDERPV DERPVHIK________ R L K I K - 0 1 0 1 0 0 1 0 1 1 1 2 0 0 1 1 0 0 0 1 0 0 11 2 1320.7514 H0Y612;Q9UPN9 H0Y612 878 888 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 2 0.021245 86.262 By matching By MS/MS 1 1 20583000 8324300 12259000 3315 1029 3669 8336;8337 7693 7693 1912 1 LKSEDELRPEVDEHTQK PPKPVRRRLKSEDELR EVDEHTQKTGVLAAVL R L K Q K T 0 1 0 2 0 1 4 0 1 0 2 2 0 0 1 1 1 0 0 1 0 0 17 2 2052.0124 E9PMG1;H0YDT0;Q96D71;H0YCR2 E9PMG1 648 664 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 4 0.008481 48.391 By MS/MS 1 22138000 22138000 0 3316 828 3670 8338 7694 7694 1478 1 LKSEDGVEGDLGETQSR YTTKIKPRLKSEDGVE DLGETQSRTITVTRRV R L K S R T 0 1 0 2 0 1 3 3 0 0 2 1 0 0 0 2 1 0 0 1 0 0 17 1 1818.8595 Q09666 Q09666 133 149 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2;3 5.6699E-06 106.47 By MS/MS By MS/MS 2 2 96323000 50587000 45736000 3317 1871 3671 8339;8340;8341;8342 7695;7696;7697;7698 7698 3541 4 LKSIEERQLLK FVQPRKKRLKSIEERQ IEERQLLK________ R L K L K - 0 1 0 0 0 1 2 0 0 1 3 2 0 0 0 1 0 0 0 0 0 0 11 2 1355.8136 O15164 O15164 1040 1050 TRIM24 Transcription intermediary factor 1-alpha yes yes 3 8.4497E-05 115.24 By MS/MS By MS/MS 1 1 23116000 10899000 12217000 3318 1362 3672 8343;8344 7699;7700 7700 2489 2 LKSLNANTDITSLAR KECQKIIRLKSLNANT TDITSLARKVVEECKL R L K A R K 2 1 2 1 0 0 0 0 0 1 3 1 0 0 0 2 2 0 0 0 0 0 15 1 1615.8893 Q92845 Q92845 58 72 KIFAP3 Kinesin-associated protein 3 yes yes 2;3 0.00038695 83.633 By MS/MS By MS/MS 2 2 13060000 7692300 5367900 3319 2442 3673 8345;8346;8347;8348 7701;7702;7703;7704 7701 4917 4 LKSVEDEMDSPGEEPFYTGQGR SSTSSTKRLKSVEDEM PFYTGQGRSPGSGSQS R L K G R S 0 1 0 2 0 1 4 3 0 0 1 1 1 1 2 2 1 0 1 1 0 0 22 1 2470.0958 S4R3W2;B1AKN7;B1AKN5;B1AKN8;Q12857 S4R3W2 45 66 NFIA Nuclear factor 1;Nuclear factor 1 A-type yes no 3 0.018599 46.578 By MS/MS By matching 1 1 8224100 5305500 2918500 3320 457 3674 8349;8350 7705 7705 885;886 1 LKTPGVDAPSWLEEQ TLKQFHIKLKTPGVDA APSWLEEQ________ K L K E Q - 1 0 0 1 0 1 2 1 0 0 2 1 0 0 2 1 1 1 0 1 0 0 15 1 1668.8359 P53367 P53367 359 373 ARFIP1 Arfaptin-1 yes yes 2 0.0026469 96.489 By MS/MS By MS/MS 1 1 18039000 10337000 7702500 3321 1760 3675 8351;8352 7706;7707 7706 6735 2 LKTPTKPPCQ QMRVPAVRLKTPTKPP TPTKPPCQ________ R L K C Q - 0 0 0 0 1 1 0 0 0 0 1 2 0 0 3 0 2 0 0 0 0 0 10 2 1168.6274 Q96L91;A0A0A0MR70 Q96L91 3150 3159 EP400 E1A-binding protein p400 yes no 2 0.011303 76.332 By matching By MS/MS 1 1 2833900 1498400 1335500 3322 2514 3676 8353;8354 7708 7708 1 LKVESGQIYKNPVTWLK ASILLNGKLKVESGQI KNPVTWLKDLLGGNSY K L K L K D 0 0 1 0 0 1 1 1 0 1 2 3 0 0 1 1 1 1 1 2 0 0 17 2 2002.1251 D6RJB7;Q8N7Z5 D6RJB7 1791 1807 ANKRD31 Putative ankyrin repeat domain-containing protein 31 yes no 2 0.0046363 55.975 By MS/MS By matching 1 1 75579000 34511000 41068000 3323 687 3677 8355;8356 7709 7709 6401;7348 1 LLAEALNQVTQRASR NLCGINQKLLAEALNQ QVTQRASRRSDSASSE K L L S R R 3 2 1 0 0 2 1 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 15 1 1668.9271 Q05655 Q05655 286 300 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2 0.00051743 91.355 By MS/MS By matching 1 1 23420000 13112000 10308000 3324 1855 3678 8357;8358 7710 7710 3491 1 LLAEALNQVTQRASRR NLCGINQKLLAEALNQ VTQRASRRSDSASSEP K L L R R S 3 3 1 0 0 2 1 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 16 2 1825.0282 Q05655 Q05655 286 301 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 4 0.0072295 50.102 By MS/MS 1 2449200 2449200 0 3325 1855 3679 8359 7711 7711 3491 1 LLAESADLVTELQGRSRR ERSAEEGRLLAESADL ELQGRSRRREGLKRRQ R L L R R R 2 3 0 1 0 1 2 1 0 0 4 0 0 0 0 2 1 0 0 1 0 0 18 2 2013.0967 I3L2A4;Q9NRC8 I3L2A4 50 67 SIRT7 NAD-dependent protein deacetylase sirtuin-7 yes no 3 0.005798 61.04 By MS/MS 1 54643000 54643000 0 3326 1205 3680 8360 7712 7712 2186;2187 1 LLAQAEGEPCYIR RVPVCHLRLLAQAEGE EGEPCYIRDSGVAPTD R L L I R D 2 1 0 0 1 1 2 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 13 0 1518.7501 H0YE41;E9PPF2;E9PM19;P29597 H0YE41 61 73 TYK2 Tyrosine-protein kinase;Non-receptor tyrosine-protein kinase TYK2 yes no 2 6.9542E-05 115.23 By MS/MS By MS/MS 1 1 21312000 10978000 10334000 3327 825 3681 8361;8362 7713;7714 7714 7389 2 LLASSPALPSSGAQAR GPPVGEPRLLASSPAL PSSGAQARLTRAPGPP R L L A R L 4 1 0 0 0 1 0 1 0 0 3 0 0 0 2 4 0 0 0 0 0 0 16 0 1524.826 Q9NYZ3 Q9NYZ3 164 179 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 9.5447E-05 107.35 By MS/MS By MS/MS 1 1 38946000 22302000 16643000 3328 2762 3682 8363;8364 7715;7716;7717 7716 5672;5673 3 LLCGLLAER AQNRSYSKLLCGLLAE LCGLLAERLRISPDRV K L L E R L 1 1 0 0 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 9 0 1043.5798 P14174 P14174 79 87 MIF Macrophage migration inhibitory factor yes yes 2 0.0070641 89.698 By MS/MS By MS/MS 1 2 28389000 9676100 18713000 3329 1579 3683 8365;8366;8367 7718;7719 7718 2 LLDEVFFSEK AERRNIHKLLDEVFFS DEVFFSEKIYKLNEDM K L L E K I 0 0 0 1 0 0 2 0 0 0 2 1 0 2 0 1 0 0 0 1 0 0 10 0 1225.6231 H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YL69;P25789;H0YKT8;H0YN18 H0YLS6 55 64 PSMA4 Proteasome subunit alpha type;Proteasome subunit alpha type-4;Proteasome subunit beta type yes no 2 0.010823 90.906 By MS/MS 1 0 0 0 3330 1090 3684 8368 7720 7720 1 LLDFGSLSNLQVTQPTVGMNFK PDTKEMLKLLDFGSLS PTVGMNFKTPRGPV__ K L L F K T 0 0 2 1 0 2 0 2 0 0 4 1 1 2 1 2 2 0 0 2 0 0 22 0 2408.241 P08708 P08708 108 129 RPS17 40S ribosomal protein S17 yes yes 2;3 1.9536E-14 118.52 By MS/MS By matching 3 1 42926000 40404000 2522200 3331 1547 3685;3686 8369;8370;8371;8372 7721;7722;7723 7722 189 2847;2848 3 LLDIDETEYHADGGKVPIK ITDFGLARLLDIDETE DGGKVPIKWMALESIL R L L I K W 1 0 0 3 0 0 2 2 1 2 2 2 0 0 1 0 1 0 1 1 0 0 19 1 2112.0739 B4DTR1;J3QLU9;P04626 B4DTR1 593 611 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 yes no 3 0.00084144 68.576 By MS/MS By MS/MS 1 1 9152900 3372200 5780700 3332 490 3687 8373;8374 7724;7725 7725 7292 2 LLDLSDSTSVASFPSADETDGNLPESR DIEQLRAKLLDLSDST DGNLPESRIEGWLSVP K L L S R I 2 1 1 4 0 0 2 1 0 0 4 0 0 1 2 6 2 0 0 1 0 0 27 0 2822.3094 Q13464 Q13464 1094 1120 ROCK1 Rho-associated protein kinase 1 yes yes 3 0.001909 52.329 By MS/MS By MS/MS 1 2 17796000 6577800 11218000 3333 1918 3688;3689 8375;8376;8377 7726;7727;7728 7728 3697;3698;3699 3 LLDQIVEK ESVQSAKRLLDQIVEK LLDQIVEKGRPAPGFH R L L E K G 0 0 0 1 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 0 956.55425 Q96AE4;C9JSZ1;E9PEB5 Q96AE4 163 170 FUBP1 Far upstream element-binding protein 1 yes no 2 0.013882 94.114 By matching By MS/MS 1 1 1921200 989760 931430 3334 2457 3690 8378;8379 7729 7729 1 LLEDSDSEDEAAPSPLQPALRPNPTAILDEAPKPK LEEARKRRLLEDSDSE LDEAPKPKRKVEVWEQ R L L P K R 5 1 1 4 0 1 4 0 0 1 5 2 0 0 7 3 1 0 0 0 0 0 35 2 3723.8843 Q9BW85 Q9BW85 207 241 CCDC94 Coiled-coil domain-containing protein 94 yes yes 4 0.00025467 52.642 By MS/MS 1 25574000 25574000 0 3335 2590 3691 8380 7730;7731 7730 5244;5245 2 LLEDSEESSEETVSR LEKNRSYRLLEDSEES SSEETVSRAGSSLQKK R L L S R A 0 1 0 1 0 0 5 0 0 0 2 0 0 0 0 4 1 0 0 1 0 0 15 0 1708.7639 A2AB15;A0A140T947;O60231 A2AB15 39 53 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 2 2.8799E-23 149.44 By MS/MS By MS/MS 2 2 240700000 133240000 107460000 3336 360 3692;3693 8381;8382;8383;8384 7732;7733;7734;7735;7736 7732 667;668;669 5 LLEDSEESSEETVSRAGSSLQK LEKNRSYRLLEDSEES RAGSSLQKKRKKRKHL R L L Q K K 1 1 0 1 0 1 5 1 0 0 3 1 0 0 0 6 1 0 0 1 0 0 22 1 2380.1242 A2AB15;A0A140T947;O60231 A2AB15 39 60 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 3 0.015228 47.68 By MS/MS By matching 1 1 9316100 4836800 4479300 3337 360 3694 8385;8386 7737 7737 667;668;669 1 LLEGEEERLKLSPSPSSR MEISAYRKLLEGEEER LSPSPSSRVTVSRASS K L L S R V 0 2 0 0 0 0 4 1 0 0 4 1 0 0 2 4 0 0 0 0 0 0 18 2 2026.0695 P20700;Q03252 P20700 380 397 LMNB1;LMNB2 Lamin-B1;Lamin-B2 no no 3 0.018146 50.924 By MS/MS By matching 1 1 34820000 16698000 18122000 3338 1612;1847 3695 8387;8388 7738 7738 2974;2975;2976 1 LLELKSPTELMK HSNVHSDRLLELKSPT KSPTELMKSKERSDVE R L L M K S 0 0 0 0 0 0 2 0 0 0 4 2 1 0 1 1 1 0 0 0 0 0 12 1 1400.7949 Q5VT06;H0Y7F7 Q5VT06 2455 2466 CEP350 Centrosome-associated protein 350 yes no 2 1.1962E-06 122.78 By MS/MS By MS/MS 1 1 5256100 2678000 2578100 3339 2114 3696 8389;8390 7739;7740 7740 4185 2 LLEPVLLLGK KRGNGLIKLLEPVLLL EPVLLLGKERFAGVDI K L L G K E 0 0 0 0 0 0 1 1 0 0 5 1 0 0 1 0 0 0 0 1 0 0 10 0 1093.7111 M0R210;A0A087WZ27;P62249;M0QX76;M0R1M5;M0R3H0;Q6IPX4 M0R210 34 43 RPS16;ZNF90 40S ribosomal protein S16 yes no 2 0.0011599 108.74 By MS/MS By MS/MS 1 1 5791200 2895400 2895800 3340 106 3697 8391;8392 7741;7742 7742 2 LLETDSKSLR AKLEEQNRLLETDSKS ETDSKSLRSVNGSRRN R L L L R S 0 1 0 1 0 0 1 0 0 0 3 1 0 0 0 2 1 0 0 0 0 0 10 1 1160.6401 O60447 O60447 95 104 EVI5 Ecotropic viral integration site 5 protein homolog yes yes 2 0.017889 67.456 By MS/MS 1 1890200 0 1890200 3341 1410 3698 8393 7743 7743 2600 1 LLFENEYSYTTQIDYNPK TNTQIVPRLLFENEYS TQIDYNPKDRLLYAWD R L L P K D 0 0 2 1 0 1 2 0 0 1 2 1 0 1 1 1 2 0 3 0 0 0 18 0 2237.0528 H0YE85;H0YEW8;F2Z3N3;Q68BL8 H0YE85 50 67 OLFML2B Olfactomedin-like protein 2B yes no 3 0.026989 43.798 By MS/MS 1 0 0 0 3342 856 3699 8394 7744 7744 7398 1 LLGASELPIVTPALR GVVPQLVKLLGASELP PIVTPALRAIGNIVTG K L L L R A 2 1 0 0 0 0 1 1 0 1 4 0 0 0 2 1 1 0 0 1 0 0 15 0 1548.9239 P52292 P52292 301 315 KPNA2 Importin subunit alpha-1 yes yes 2 0.021403 78.692 By MS/MS 1 0 0 0 3343 1752 3700 8395 7745 7745 1 LLGGLAVR QAESLRYKLLGGLAVR LLGGLAVRRACYGVLR K L L V R R 1 1 0 0 0 0 0 2 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 797.51232 P23396;E9PL09;F2Z2S8;H0YF32;H0YCJ7 P23396 109 116 RPS3 40S ribosomal protein S3 yes no 2 0.028206 77.374 By MS/MS 1 1378800 1378800 0 3344 1622 3701 8396 7746 7746 1 LLGPSAAADILQLSSSLPLQSR NPPLILQRLLGPSAAA SSLPLQSRGRARLLVG R L L S R G 3 1 0 1 0 2 0 1 0 1 6 0 0 0 2 5 0 0 0 0 0 0 22 0 2236.2427 Q7Z6Z7 Q7Z6Z7 2580 2601 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 1.0647E-19 125.99 By MS/MS 1 15544000 15544000 0 3345 2226 3702 8397 7747 7747 4464 1 LLGSLDEVVLLSPVPELR STPKPLSKLLGSLDEV LSPVPELRDSSKLHDS K L L L R D 0 1 0 1 0 0 2 1 0 0 6 0 0 0 2 2 0 0 0 3 0 0 18 0 1948.1245 Q9H1A4;H0Y564 Q9H1A4 544 561 ANAPC1 Anaphase-promoting complex subunit 1 yes no 2 3.0077E-06 102.69 By MS/MS By matching 1 1 2594000 2191900 402050 3346 2635 3703 8398;8399 7748 7748 5366 1 LLHEDLDESDDDMDEK VHVEYEWRLLHEDLDE SDDDMDEKLQPSPNRR R L L E K L 0 0 0 6 0 0 3 0 1 0 3 1 1 0 0 1 0 0 0 0 0 0 16 0 1917.7786 O43150 O43150 693 708 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 yes yes 2 0.0013493 75.911 By MS/MS By MS/MS 1 1 14285000 7685000 6600100 3347 1370 3704 8400;8401 7749;7750 7750 2506 2 LLHMDSDDEIPIR EERRLQERLLHMDSDD SDDEIPIRKKERNPMD R L L I R K 0 1 0 3 0 0 1 0 1 2 2 0 1 0 1 1 0 0 0 0 0 0 13 0 1552.7555 Q1MSJ5 Q1MSJ5 961 973 CSPP1 Centrosome and spindle pole-associated protein 1 yes yes 2 0.011701 79.089 By matching By MS/MS 1 1 7600500 4894700 2705800 3348 2025 3705 8402;8403 7751 7751 3958 0 LLHSPMTK DPLEMEIKLLHSPMTK LLHSPMTKIADAIENK K L L T K I 0 0 0 0 0 0 0 0 1 0 2 1 1 0 1 1 1 0 0 0 0 0 8 0 925.50552 Q9NVN8 Q9NVN8 462 469 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 2 2.9861E-10 115.46 By MS/MS By matching 1 1 18240000 9095800 9144700 3349 2741 3706 8404;8405 7752 7752 5611 0 LLIDPNCSGHSPR KGSFSKGRLLIDPNCS NCSGHSPRTARHAPAV R L L P R T 0 1 1 1 1 0 0 1 1 1 2 0 0 0 2 2 0 0 0 0 0 0 13 0 1464.7143 Q8WYQ5;C9JSD5 Q8WYQ5 85 97 DGCR8 Microprocessor complex subunit DGCR8 yes no 2;3 0.00013341 114.7 By MS/MS By MS/MS 2 2 22001000 11799000 10202000 3350 2418 3707 8406;8407;8408;8409 7753;7754;7755 7754 4860;4861 3 LLIEMEQR QMVVDGVKLLIEMEQR LLIEMEQRLEQGQAID K L L Q R L 0 1 0 0 0 1 2 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 8 0 1030.5481 P12277;H0YJG0 P12277 359 366 CKB Creatine kinase B-type yes no 2 0.0099025 124.59 By MS/MS By MS/MS 1 1 7441700 4839300 2602400 3351 1571 3708 8410;8411 7756;7757 7757 2 LLISDNMK L L M K 0 0 1 1 0 0 0 0 0 1 2 1 1 0 0 1 0 0 0 0 0 0 8 0 932.5001 REV__A2A376 yes no 2 0.015 79.148 By MS/MS 1 10112000 0 10112000 + 3352 2965 3709 8412 7758 7758 6150 1 LLIVQDASER QEAEEENRLLIVQDAS IVQDASERAALIPGGL R L L E R A 1 1 0 1 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1142.6295 C9JPX5;C9JKL2;O95772 C9JPX5 186 195 STARD3NL MLN64 N-terminal domain homolog yes no 2 2.2415E-05 132.17 By MS/MS By MS/MS 1 1 6825100 3229100 3596000 3353 597 3710 8413;8414 7759;7760 7760 1087 2 LLKEGEEPTVYSDEEEPKDESAR FKYHHVGKLLKEGEEP EPKDESARKND_____ K L L A R K 1 1 0 2 0 0 7 1 0 0 2 2 0 0 2 2 1 0 1 1 0 0 23 2 2649.2294 O00264 O00264 170 192 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3;4 3.1412E-19 114.24 By MS/MS By MS/MS 2 2 841540000 509690000 331850000 3354 1327 3711 8415;8416;8417;8418 7761;7762;7763;7764 7761 2392;6587;7497 4 LLKPGEEPSEYTDEEDTK EKYDYVGRLLKPGEEP YTDEEDTKDHNKQD__ R L L T K D 0 0 0 2 0 0 5 1 0 0 2 2 0 0 2 1 2 0 1 0 0 0 18 1 2078.9532 O15173;D3DNX8;U3KQM0 O15173 200 217 PGRMC2 Membrane-associated progesterone receptor component 2 yes no 3 0.025617 43.794 By matching By MS/MS 1 1 10796000 5435900 5359800 3355 1363 3712 8419;8420 7765 7765 1 LLKQKSEEPSVSIPFLQTALLR GHGVPHGKLLKQKSEE FLQTALLRSSGSLGHR K L L L R S 1 1 0 0 0 2 2 0 0 1 5 2 0 1 2 3 1 0 0 1 0 0 22 2 2496.4316 H0Y2V6;Q5SW79;H0YB66 H0Y2V6 405 426 CEP170 Centrosomal protein of 170 kDa yes no 3 0.00094402 65.184 By MS/MS By matching 1 1 10588000 9382300 1205500 3356 1006 3713 8421;8422 7766 7766 1841;1842 1 LLLAADPGGSPAQR CPPHPTARLLLAADPG PGGSPAQRRRTRGTPP R L L Q R R 3 1 0 1 0 1 0 2 0 0 3 0 0 0 2 1 0 0 0 0 0 0 14 0 1364.7412 Q5SQI0 Q5SQI0 306 319 ATAT1 Alpha-tubulin N-acetyltransferase 1 yes yes 2 0.00081034 96.015 By MS/MS By MS/MS 1 1 6159900 3692700 2467200 3357 2086 3714 8423;8424 7767;7768 7767 4110 2 LLLAEDSEEEVDFLSER QGETQPQRLLLAEDSE EVDFLSERRMVKKSRT R L L E R R 1 1 0 2 0 0 5 0 0 0 4 0 0 1 0 2 0 0 0 1 0 0 17 0 1992.9528 Q14676 Q14676 162 178 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2;3 2.3058E-22 145.82 By MS/MS By MS/MS 2 2 193620000 114590000 79031000 3358 1951 3715 8425;8426;8427;8428 7769;7770;7771;7772 7771 3776 4 LLLAEDSEEEVDFLSERR QGETQPQRLLLAEDSE VDFLSERRMVKKSRTT R L L R R M 1 2 0 2 0 0 5 0 0 0 4 0 0 1 0 2 0 0 0 1 0 0 18 1 2149.0539 Q14676 Q14676 162 179 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 1.724E-05 83.856 By MS/MS By MS/MS 1 1 105020000 67315000 37700000 3359 1951 3716 8429;8430 7773;7774 7773 3776 2 LLLERPSPIR SDNDRSSRLLLERPSP LERPSPIRDRRGSLEK R L L I R D 0 2 0 0 0 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 10 1 1192.7292 A0A087WWP4;Q96T37 A0A087WWP4 650 659 RBM15 Putative RNA-binding protein 15 yes no 2 0.018376 67.252 By MS/MS By matching 1 1 34204000 16500000 17704000 3360 81 3717 8431;8432 7775 7775 151 1 LLLERPSPIRDR SDNDRSSRLLLERPSP RPSPIRDRRGSLEKSQ R L L D R R 0 3 0 1 0 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 12 2 1463.8572 A0A087WWP4;Q96T37 A0A087WWP4 650 661 RBM15 Putative RNA-binding protein 15 yes no 3 0.011658 63.181 By MS/MS By MS/MS 1 1 127940000 64188000 63754000 3361 81 3718 8433;8434 7776;7777 7776 151 2 LLLGSPSSLSPFSK ASGGLSKKLLLGSPSS SSLSPFSKRIKLEKEF K L L S K R 0 0 0 0 0 0 0 1 0 0 4 1 0 1 2 5 0 0 0 0 0 0 14 0 1431.7973 Q9H165 Q9H165 621 634 BCL11A B-cell lymphoma/leukemia 11A yes yes 2 3.0958E-27 169.15 By MS/MS By MS/MS 3 3 27608000 16119000 11489000 3362 2634 3719;3720 8435;8436;8437;8438;8439;8440 7778;7779;7780;7781;7782 7781 5361;5362;5363;5364 5 LLLNPGNQR MGRKDAERLLLNPGNQ LLNPGNQRGIFLVRES R L L Q R G 0 1 2 0 0 1 0 1 0 0 3 0 0 0 1 0 0 0 0 0 0 0 9 0 1023.5825 J3QRU1;P07947 J3QRU1 176 184 YES1 Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Yes yes no 2 0.0083619 56.122 By MS/MS 1 747580 0 747580 3363 1257 3721 8441 7783 7783 1 LLLPGELAK REIQTAVRLLLPGELA LLPGELAKHAVSEGTK R L L A K H 1 0 0 0 0 0 1 1 0 0 4 1 0 0 1 0 0 0 0 0 0 0 9 0 952.59572 Q16778;P33778;P23527;P06899;Q8N257;U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q96A08 Q16778 101 109 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BA Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-A yes no 2 0.0050649 101.6 By MS/MS By MS/MS 1 1 93458000 53395000 40063000 3364 1534 3722 8442;8443 7784;7785 7785 2 LLLQVQHASK VAPIERVKLLLQVQHA LQVQHASKQISAEKQY K L L S K Q 1 0 0 0 0 2 0 0 1 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1135.6713 V9GYG0;P12236;P12235;P05141 V9GYG0 34 43 SLC25A4;SLC25A6;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 3 0.0014094 82.029 By MS/MS By MS/MS 1 1 0 0 0 3365 1524 3723 8444;8445 7786;7787 7786 2 LLNDEDPVVVTK RALPELTKLLNDEDPV EDPVVVTKAAMIVNQL K L L T K A 0 0 1 2 0 0 1 0 0 0 2 1 0 0 1 0 1 0 0 3 0 0 12 0 1340.7187 C9JTX4;C9J826;C9JK18;C9JKY1;P14923 C9JTX4 150 161 JUP Junction plakoglobin yes no 2 0.01168 66.568 By MS/MS 1 1191100 0 1191100 3366 568 3724 8446 7788 7788 0 LLNLKNDSLR NELDSGFRLLNLKNDS NLKNDSLRKRYDGLKY R L L L R K 0 1 2 1 0 0 0 0 0 0 4 1 0 0 0 1 0 0 0 0 0 0 10 1 1184.6877 E9PGT1;Q15631 E9PGT1 178 187 TSN Translin yes no 2 0.014156 70.488 By MS/MS 1 701270 0 701270 3367 795 3725 8447 7789 7789 1426 1 LLPEGEETLESDDEKDEHTSK PQNAKKARLLPEGEET EKDEHTSKKRKVEPGE R L L S K K 0 0 0 3 0 0 6 1 1 0 3 2 0 0 1 2 2 0 0 0 0 0 21 1 2400.0816 Q8N6N3 Q8N6N3 148 168 C1orf52 UPF0690 protein C1orf52 yes yes 2;3;4 1.3087E-10 107.83 By MS/MS By MS/MS 3 3 243270000 149820000 93443000 3368 2322 3726 8448;8449;8450;8451;8452;8453 7790;7791;7792;7793;7794 7790 4661 5 LLPPASP LLQRLKNRLLPPASP_ RLLPPASP________ R L L S P - 1 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 0 0 0 0 0 0 7 0 693.40613 Q9Y4R8 Q9Y4R8 831 837 TELO2 Telomere length regulation protein TEL2 homolog yes yes 1;2 0.0071439 99.375 By MS/MS By MS/MS 2 2 11362000 5992800 5368900 3369 2924 3727 8454;8455;8456;8457 7795;7796;7797;7798;7799 7796 6079 5 LLPSAPQTLPDGPLASPAR EHSSPSVRLLPSAPQT GPLASPARVPMFPVPL R L L A R V 3 1 0 1 0 1 0 1 0 0 4 0 0 0 5 2 1 0 0 0 0 0 19 0 1900.0418 F1T0I1;J3KNL6;O15027;A0A0C4DH09;X6RGP5 F1T0I1 1949 1967 SEC16A Protein transport protein Sec16A yes no 3 0.0096663 49.425 By MS/MS By MS/MS 1 1 3493900 1792600 1701400 3370 846 3728 8458;8459 7800;7801 7801 1525 2 LLPSVWSESEDGAGSPPPYR VDEDELKRLLPSVWSE AGSPPPYRRRKRPSSA R L L Y R R 1 1 0 1 0 0 2 2 0 0 2 0 0 0 4 4 0 1 1 1 0 0 20 0 2143.0222 K7EN65;K7EMA9;K7EPZ6;A0A0A0MS90;Q9UIS9 K7EN65 35 54 MBD1 Methyl-CpG-binding domain protein 1 yes no 2 0.011904 53.453 By MS/MS 1 8024600 8024600 0 3371 211 3729 8460 7802 7802 384 1 LLPYPTLASPASD WVSRGPDKLLPYPTLA TLASPASD________ K L L S D - 2 0 0 1 0 0 0 0 0 0 3 0 0 0 3 2 1 0 1 0 0 0 13 0 1343.6973 P0C1Z6 P0C1Z6 241 253 TFPT TCF3 fusion partner yes yes 2 1.7865E-10 134.75 By MS/MS By MS/MS 2 2 14426000 7832400 6593100 3372 1551 3730;3731 8461;8462;8463;8464 7803;7804;7805;7806 7803 2851;2852 4 LLQAQGVEVPSKDSLPK ARAEATLKLLQAQGVE PSKDSLPKKRPIYEDK K L L P K K 1 0 0 1 0 2 1 1 0 0 3 2 0 0 2 2 0 0 0 2 0 0 17 1 1808.0044 A0A087WUT6;O60841 A0A087WUT6 425 441 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 0.00015599 80.277 By MS/MS By MS/MS 2 2 14029000 6193600 7835400 3373 49 3732 8465;8466;8467;8468 7807;7808;7809;7810;7811 7811 85;86 5 LLQDFFNGK TRIPKIQKLLQDFFNG LQDFFNGKELNKSINP K L L G K E 0 0 1 1 0 1 0 1 0 0 2 1 0 2 0 0 0 0 0 0 0 0 9 0 1080.5604 P17066;P11142;E9PKE3;E9PN89;E9PNE6;P54652;A8K7Q2 P11142 349 357 HSPA6;HSPA8;HSPA2 Heat shock 70 kDa protein 6;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 2 0.0030607 123.69 By MS/MS By MS/MS 1 2 3443700 1650400 1793300 3374 1560;1590 3733;3734 8469;8470;8471 7812;7813;7814 7813 3 LLQDFFNGR TRIPKVQKLLQDFFNG LQDFFNGRDLNKSINP K L L G R D 0 1 1 1 0 1 0 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 9 0 1108.5665 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 350 358 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.0092684 85.064 By MS/MS By MS/MS 2 1 2731900 1462800 1269100 3375 320 3735;3736 8472;8473;8474 7815;7816;7817 7815 3 LLQDSSSPVDLAK EKHKILHRLLQDSSSP SSPVDLAKLTAEATGK R L L A K L 1 0 0 2 0 1 0 0 0 0 3 1 0 0 1 3 0 0 0 1 0 0 13 0 1371.7246 E7EWM1;Q15596 E7EWM1 693 705 NCOA2 Nuclear receptor coactivator 2 yes no 2 0.0013103 99.941 By MS/MS By matching 1 1 16807000 10376000 6431100 3376 748 3737 8475;8476 7818 7818 1361 1 LLQERELVEPLTPSGEAPNQALLR VRKRTLRRLLQERELV APNQALLRILKETEFK R L L L R I 2 2 1 0 0 2 4 1 0 0 6 0 0 0 3 1 1 0 0 1 0 0 24 1 2672.4497 E9PFD7;P00533;Q504U8 E9PFD7 637 660 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor yes no 3 0.00042202 63.869 By MS/MS 1 5284300 5284300 0 3377 778 3738 8477 7819 7819 6437 1 LLQMEKRPSLPV LWISAQPKLLQMEKRP EKRPSLPV________ K L L P V - 0 1 0 0 0 1 1 0 0 0 3 1 1 0 2 1 0 0 0 1 0 0 12 2 1409.8065 J3QR46 J3QR46 88 99 KIAA0040 yes yes 2 0.019075 86.699 By MS/MS By matching 1 1 11951000 7705900 4245100 3378 1255 3739 8478;8479 7820 7820 2272 1 LLQQQQAVPVPPAPSSPPPLWAGLAK RQQELLLKLLQQQQAV PLWAGLAKQGLSMKTL K L L A K Q 4 0 0 0 0 4 0 1 0 0 4 1 0 0 7 2 0 1 0 2 0 0 26 0 2689.4956 O75420 O75420 741 766 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 3 0.0079232 53.381 By MS/MS By matching 1 1 31487000 21929000 9557900 3379 1439 3740 8480;8481 7821 7821 2653;2654 0 LLQSPLCAGCSSDK YARRRYYRLLQSPLCA CAGCSSDKQQCWCRQA R L L D K Q 1 0 0 1 2 1 0 1 0 0 3 1 0 0 1 3 0 0 0 0 0 0 14 0 1534.712 Q9UJX6 Q9UJX6 215 228 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 2 0.006195 66.285 By MS/MS By MS/MS 1 1 4971500 2370500 2601000 3380 2823 3741 8482;8483 7822;7823 7823 5802 2 LLQTCFSSPADDSMDR EELEFCEKLLQTCFSS PADDSMDR________ K L L D R - 1 1 0 3 1 1 0 0 0 0 2 0 1 1 1 3 1 0 0 0 0 0 16 0 1841.7924 Q9NZL4 Q9NZL4 347 362 HSPBP1 Hsp70-binding protein 1 yes yes 2 0.0016141 74.428 By MS/MS By matching 1 1 12832000 8194400 4637900 3381 2769 3742 8484;8485 7824 7824 5684 1 LLQTTNNSPMNSKPQQIK KAVGTITKLLQTTNNS NSKPQQIKMQSTKKGP K L L I K M 0 0 3 0 0 3 0 0 0 1 2 2 1 0 2 2 2 0 0 0 0 0 18 1 2041.0626 O00178;B0QY59 O00178 573 590 GTPBP1 GTP-binding protein 1 yes no 3 0.00035531 74.786 By MS/MS By MS/MS 1 1 42662000 23179000 19483000 3382 1322 3743 8486;8487 7825;7826 7826 2383 2 LLSASQLSAEEEEEKQAE MKWKKESKLLSASQLS EEEEKQAE________ K L L A E - 3 0 0 0 0 2 6 0 0 0 3 1 0 0 0 3 0 0 0 0 0 0 18 1 1989.9379 P17509 P17509 207 224 HOXB6 Homeobox protein Hox-B6 yes yes 2;3 3.3E-38 160.09 By MS/MS By MS/MS 2 2 136190000 77257000 58932000 3383 1594 3744 8488;8489;8490;8491 7827;7828;7829 7827 2924 3 LLSDNGINR LGNEPLQRLLSDNGIN LSDNGINRLSLMAPDT R L L N R L 0 1 2 1 0 0 0 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1000.5302 H0Y7I6;E9PI60;Q9ULD4 H0Y7I6 109 117 BRPF3 Bromodomain and PHD finger-containing protein 3 yes no 2 0.0038829 90.149 By MS/MS By matching 2 1 11043000 6451000 4591600 3384 799 3745;3746 8492;8493;8494 7830;7831 7830 1434 2 LLSESAQPLK PYPYPSKKLLSESAQP SESAQPLKKVEEEQEA K L L L K K 1 0 0 0 0 1 1 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 0 1084.6128 Q9H3N1 Q9H3N1 224 233 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.0065558 89.403 By MS/MS 1 0 0 0 3385 2653 3747 8495 7832 7832 5409 1 LLSESAQPLKKVEEEQEADEEDVSEEEAESK PYPYPSKKLLSESAQP SEEEAESKEGTNKDFP K L L S K E 3 0 0 2 0 2 11 0 0 0 3 3 0 0 1 4 0 0 0 2 0 0 31 2 3503.6163 Q9H3N1 Q9H3N1 224 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 4 3.9605E-05 64.685 By MS/MS By MS/MS 1 1 27528000 15764000 11765000 3386 2653 3748 8496;8497 7833;7834 7834 5408;5409 2 LLSFRSMEEAR PFTRGRLRLLSFRSME FRSMEEARLVPTVKEK R L L A R L 1 2 0 0 0 0 2 0 0 0 2 0 1 1 0 2 0 0 0 0 0 0 11 1 1337.6762 I3L1Q8;O43149 I3L1Q8 21 31 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes no 2 0.0036084 88.021 By MS/MS By MS/MS 2 2 41041000 22624000 18417000 3387 1202 3749;3750 8498;8499;8500;8501 7835;7836 7835 2182 2 LLSFSPEEFPTLK GGLRGSSRLLSFSPEE PEEFPTLKAAGGQDKA R L L L K A 0 0 0 0 0 0 2 0 0 0 3 1 0 2 2 2 1 0 0 0 0 0 13 0 1506.797 Q5JSZ5 Q5JSZ5 164 176 PRRC2B Protein PRRC2B yes yes 2 2.787E-07 124.51 By MS/MS By MS/MS 1 1 6764600 3964500 2800100 3388 2074 3751 8502;8503 7837;7838 7838 4083 2 LLSPACPAPK RVGCADSRLLSPACPA SPACPAPKEVTAAPAV R L L P K E 2 0 0 0 1 0 0 0 0 0 2 1 0 0 3 1 0 0 0 0 0 0 10 0 1052.5689 T1ECW5;O75170;A0A0A0MSJ8 T1ECW5 594 603 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 2 0.0050588 77.674 By MS/MS By MS/MS 1 1 7121500 3712700 3408800 3389 3013 3752 8504;8505 7839;7840 7839 6207 2 LLSPLSSAR KAFQLKSRLLSPLSSA LSPLSSARLPPEPGLS R L L A R L 1 1 0 0 0 0 0 0 0 0 3 0 0 0 1 3 0 0 0 0 0 0 9 0 942.54983 A0A087WZ13;E9PAU2 A0A087WZ13 565 573 RAVER1 yes no 2 0.0049387 86.189 By MS/MS By MS/MS 1 1 127990000 78923000 49068000 3390 104 3753 8506;8507 7841;7842 7841 197 2 LLSPQQPALQR TSSLTDPRLLSPQQPA PQQPALQRNSVSPGLP R L L Q R N 1 1 0 0 0 3 0 0 0 0 3 0 0 0 2 1 0 0 0 0 0 0 11 0 1249.7143 Q14814 Q14814 178 188 MEF2D Myocyte-specific enhancer factor 2D yes yes 2 7.1027E-06 134.49 By MS/MS By MS/MS 1 1 9454600 5641300 3813300 3391 1960 3754 8508;8509 7843;7844 7844 3810 2 LLSSNEDDANILSSPTDR VQPSKLMRLLSSNEDD ILSSPTDRSMSSSLSA R L L D R S 1 1 2 3 0 0 1 0 0 1 3 0 0 0 1 4 1 0 0 0 0 0 18 0 1945.9229 H0YEG1;F5GY88;A0A0B4J1W0;O75448 H0YEG1 36 53 MED24 Mediator of RNA polymerase II transcription subunit 24 yes no 2;3 4.9332E-09 115.31 By MS/MS By MS/MS 4 3 169070000 102650000 66417000 3392 259 3755;3756 8510;8511;8512;8513;8514;8515;8516 7845;7846;7847;7848;7849;7850;7851;7852 7846 472;473;474 8 LLSSSLTADCSLR EEEDEQVRLLSSSLTA LTADCSLRSPSGREVE R L L L R S 1 1 0 1 1 0 0 0 0 0 4 0 0 0 0 4 1 0 0 0 0 0 13 0 1421.7184 Q147X3 Q147X3 186 198 NAA30 N-alpha-acetyltransferase 30 yes yes 2 6.8028E-05 103.97 By MS/MS By matching 1 1 2685900 1433500 1252400 3393 1959 3757 8517;8518 7853 7853 3807 0 LLSSSLTADCSLRSPSGR EEEDEQVRLLSSSLTA SLRSPSGREVEPGEDR R L L G R E 1 2 0 1 1 0 0 1 0 0 4 0 0 0 1 6 1 0 0 0 0 0 18 1 1905.9578 Q147X3 Q147X3 186 203 NAA30 N-alpha-acetyltransferase 30 yes yes 3 0.0069421 53.924 By matching By MS/MS 1 1 7259800 4110300 3149500 3394 1959 3758 8519;8520 7854 7854 3807;3808 1 LLSTCGLVQSVELQEKPDLAESPKESR CTEESLSRLLSTCGLV AESPKESRSKFFHPKP R L L S R S 1 1 0 1 1 2 4 1 0 0 5 2 0 0 2 4 1 0 0 2 0 0 27 2 3012.5438 Q9Y3A4 Q9Y3A4 78 104 RRP7A Ribosomal RNA-processing protein 7 homolog A yes yes 3 0.010901 47.281 By MS/MS By matching 1 1 8252600 4240500 4012100 3395 2906 3759 8521;8522 7855 7855 6050 1 LLSTDAEAVSTR DVEKEVKRLLSTDAEA DAEAVSTRWEIIAEDE R L L T R W 2 1 0 1 0 0 1 0 0 0 2 0 0 0 0 2 2 0 0 1 0 0 12 0 1261.6514 Q15545 Q15545 169 180 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 2 9.2776E-07 122.66 By MS/MS By MS/MS 1 1 10826000 6540200 4286000 3396 1994 3760 8523;8524 7856;7857 7856 3893 2 LLSVGDGTR AKGHPERRLLSVGDGT LSVGDGTRVGMGARTP R L L T R V 0 1 0 1 0 0 0 2 0 0 2 0 0 0 0 1 1 0 0 1 0 0 9 0 916.49779 H3BTF6;H3BND0;Q7L2K0 H3BTF6 124 132 C16orf59 Uncharacterized protein C16orf59 yes no 2 0.0070432 80.102 By MS/MS By MS/MS 1 1 4525100 2507100 2018100 3397 1118 3761 8525;8526 7858;7859 7859 2043 2 LLSWSDNWR VLPPTRRRLLSWSDNW LSWSDNWREILDSKRG R L L W R E 0 1 1 1 0 0 0 0 0 0 2 0 0 0 0 2 0 2 0 0 0 0 9 0 1175.5724 J3KSY6;J3KSX6;Q8TCD5 J3KSY6 94 102 NT5C 5(3)-deoxyribonucleotidase, cytosolic type yes no 2 0.0043868 105.4 By matching By MS/MS 1 1 12839000 7156500 5682600 3398 1243 3762 8527;8528 7860 7860 2252 1 LLTGIKSPR LSPTVKGKLLTGIKSP LTGIKSPRSYTPKPNP K L L P R S 0 1 0 0 0 0 0 1 0 1 2 1 0 0 1 1 1 0 0 0 0 0 9 1 983.61277 Q8IWI9 Q8IWI9 1202 1210 MGA MAX gene-associated protein yes yes 2 0.003882 93.623 By MS/MS By MS/MS 1 1 22596000 12675000 9921000 3399 2268 3763 8529;8530 7861;7862 7861 4550 2 LLVVTDPR QAAFREPRLLVVTDPR LLVVTDPRADHQPLTE R L L P R A 0 1 0 1 0 0 0 0 0 0 2 0 0 0 1 0 1 0 0 2 0 0 8 0 911.54402 C9J9K3;A0A0C4DG17;P08865 C9J9K3 121 128 RPSA 40S ribosomal protein SA yes no 2 0.013833 94.262 By matching By MS/MS 1 1 6893500 3960200 2933300 3400 274 3764 8531;8532 7863 7863 1 LLYEIQNR KQAIEESRLLYEIQNR LLYEIQNRDEQAFPAL R L L N R D 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 8 0 1047.5713 Q01804 Q01804 458 465 OTUD4 OTU domain-containing protein 4 yes yes 2 0.0032174 108.09 By MS/MS By MS/MS 1 1 3246900 2032300 1214600 3401 1833 3765 8533;8534 7864;7865;7866 7864 7663 3 LLYGCAGSDSECSAGR SPSAPQRRLLYGCAGS DSECSAGRLGPLGRRG R L L G R L 2 1 0 1 2 0 1 3 0 0 2 0 0 0 0 3 0 0 1 0 0 0 16 0 1701.7087 A0A0C4DFP1;Q96B18 A0A0C4DFP1 288 303 DACT3 Dapper homolog 3 yes no 2 0.020821 53.403 By MS/MS By matching 1 1 6350100 3241300 3108800 3402 264 3766 8535;8536 7867 7867 482 1 LMELHGEGSSSGK KPKFELGKLMELHGEG GEGSSSGKATGDETGA K L M G K A 0 0 0 0 0 0 2 3 1 0 2 1 1 0 0 3 0 0 0 0 0 0 13 0 1330.6187 D6RAT0;P61247;D6R9B6;H0Y9Y4;D6RG13 D6RAT0 191 203 RPS3A 40S ribosomal protein S3a yes no 2 0.0019018 89.26 By MS/MS By MS/MS 1 1 14499000 8205000 6294300 3403 652 3767 8537;8538 7868;7869 7869 1172;1173;1174 2 LMETYCSQKHTR VAFLLRGKLMETYCSQ YCSQKHTRLDYIGDSK K L M T R L 0 1 0 0 1 1 1 0 1 0 1 1 1 0 0 1 2 0 1 0 0 0 12 1 1552.7126 B5MCV9;Q96H15 B5MCV9 42 53 TIMD4 T-cell immunoglobulin and mucin domain-containing protein 4 yes no 2 0.0038823 67.749 By MS/MS 1 0 0 0 3404 504 3768 8539 7870 7870 944;6356;7296 1 LMFKTEGPDSD QSTSRHKKLMFKTEGP KTEGPDSD________ K L M S D - 0 0 0 2 0 0 1 1 0 0 1 1 1 1 1 1 1 0 0 0 0 0 11 1 1238.5489 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 224 234 TP53 Cellular tumor antigen p53 yes no 2 7.1014E-41 194.39 By MS/MS By MS/MS 4 6 1516500000 783360000 733140000 3405 118 3769;3770 8540;8541;8542;8543;8544;8545;8546;8547;8548;8549 7871;7872;7873;7874;7875;7876;7877;7878;7879;7880;7881;7882;7883;7884 7883 13 214 13 LMHNASDSEVDQDDVVEWK HLTEEPTKLMHNASDS QDDVVEWKDGASPSES K L M W K D 1 0 1 4 0 1 2 0 1 0 1 1 1 0 0 2 0 1 0 3 0 0 19 0 2215.9692 Q9H2P0 Q9H2P0 948 966 ADNP Activity-dependent neuroprotector homeobox protein yes yes 2;3 3.2445E-05 81.808 By MS/MS By MS/MS 4 3 40316000 23880000 16436000 3406 2647 3771;3772;3773 8550;8551;8552;8553;8554;8555;8556 7885;7886;7887;7888;7889;7890 7885 5393;5394 6 LMIEMDGTENK TEQEKIDKLMIEMDGT EMDGTENKSKFGANAI K L M N K S 0 0 1 1 0 0 2 1 0 1 1 1 2 0 0 0 1 0 0 0 0 0 11 0 1279.5788 P06733;K7EM90 P06733 93 103 ENO1 Alpha-enolase;Enolase yes no 2 0.018507 76.282 By MS/MS By matching 1 1 3151700 1615200 1536500 3407 1532 3774 8557;8558 7891 7891 1 LMKSESMPVQLNK QQQQQQQRLMKSESMP SMPVQLNKGLSSKNIS R L M N K G 0 0 1 0 0 1 1 0 0 0 2 2 2 0 1 2 0 0 0 1 0 0 13 1 1503.7789 Q92609;C9J3F6 Q92609 517 529 TBC1D5 TBC1 domain family member 5 yes no 3 0.030253 46.66 By MS/MS 1 934170 0 934170 3408 2427 3775 8559 7892 7892 4878 1 LMLLLEVISGER EDFRNGLKLMLLLEVI LEVISGERLPKPDRGK K L M E R L 0 1 0 0 0 0 2 1 0 1 4 0 1 0 0 1 0 0 0 1 0 0 12 0 1371.7796 P35609;G3V5M4;G3V2N5;A0A087WSZ2;P12814;Q08043;O43707 P35609 72 83 ACTN2;ACTN1;ACTN3;ACTN4 Alpha-actinin-2;Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4 yes no 2 0.0018325 99.973 By matching By MS/MS 1 2 11354000 4581500 6772200 3409 1672 3776;3777 8560;8561;8562 7893;7894 7893 207 2 LMLSTSEYSQSPK SLTGDSCKLMLSTSEY SEYSQSPKMESLSSHR K L M P K M 0 0 0 0 0 1 1 0 0 0 2 1 1 0 1 4 1 0 1 0 0 0 13 0 1469.7072 Q12888;A6NNK5;C9JXV0 Q12888 515 527 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 2.8818E-21 167.69 By MS/MS By MS/MS 2 2 25979000 15478000 10501000 3410 1882 3778;3779 8563;8564;8565;8566 7895;7896;7897 7895 3575 3 LMNRSISCTMKNPK ________________ SCTMKNPKVEVFGYPP R L M P K V 0 1 2 0 1 0 0 0 0 1 1 2 2 0 1 2 1 0 0 0 0 0 14 2 1678.8317 H3BSK7;H3BMA3;A0A087X1Y8;H3BRZ3;H3BRR4;F5H3B4;H3BQK2;Q2NL67 H3BSK7 5 18 PARP6 Poly [ADP-ribose] polymerase 6 yes no 2 0.0091866 58.676 By MS/MS 1 0 0 0 3411 144 3780 8567 7898 7898 17 1 LMSALTQLK SLDAANARLMSALTQL MSALTQLKESMH____ R L M L K E 1 0 0 0 0 1 0 0 0 0 3 1 1 0 0 1 1 0 0 0 0 0 9 0 1003.5736 H0Y3A3;Q5VWQ8 H0Y3A3 1057 1065 DAB2IP Disabled homolog 2-interacting protein yes no 2 0.0049818 90.827 By MS/MS 1 1958700 0 1958700 3412 1012 3781 8568 7899 7899 121 1867;6506 1 LMSPVLK RADSQTEKLMSPVLKQ KLMSPVLKQHLNQQAS K L M L K Q 0 0 0 0 0 0 0 0 0 0 2 1 1 0 1 1 0 0 0 1 0 0 7 0 786.46735 E7EPB1;E7EQS8;Q6N021 E7EPB1 694 700 TET2 Methylcytosine dioxygenase TET2 yes no 2 0.0059621 106.42 By MS/MS 1 0 0 0 3413 711 3782 8569 7900 7900 1260 1 LMTGDTYTAHAGAK VADFGLSRLMTGDTYT YTAHAGAKFPIKWTAP R L M A K F 3 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 3 0 1 0 0 0 14 0 1435.6766 P00519;P42684 P42684 433 446 ABL1;ABL2 Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2 no no 2 5.1527E-06 119.03 By MS/MS By matching 1 1 8205000 4610600 3594300 3414 1699;1512 3783 8570;8571 7901 7901 179 7546 1 LMTPKPVSIATNR SQYPPVQRLMTPKPVS PVSIATNRSVYFKPSL R L M N R S 1 1 1 0 0 0 0 0 0 1 1 1 1 0 2 1 2 0 0 1 0 0 13 1 1426.7966 P49790 P49790 367 379 NUP153 Nuclear pore complex protein Nup153 yes yes 3 0.0098077 54.953 By MS/MS By matching 1 1 4090500 2602900 1487700 3415 1729 3784 8572;8573 7902 7902 213 6718 1 LNATASLEQER PQPQARSRLNATASLE TASLEQERSERPRAPG R L N E R S 2 1 1 0 0 1 2 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1230.6204 O76024 O76024 27 37 WFS1 Wolframin yes yes 2 4.573E-06 128.68 By MS/MS By MS/MS 1 1 17733000 9997700 7735400 3416 1455 3785 8574;8575 7903;7904 7903 2691 2 LNDLQVESCLVSAPDAPLLSCKNPLK L N L K 2 0 2 2 2 1 1 0 0 0 6 2 0 0 3 3 0 0 0 2 0 0 26 1 2880.4725 REV__Q05066 yes yes 3 0.018678 43.956 By MS/MS 1 15110000 15110000 0 + 3417 2990 3786 8576 7905 7905 6180;6181 1 LNDSPTLK GSPAPSNRLNDSPTLK LNDSPTLKKLDELPIF R L N L K K 0 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 1 0 0 0 0 0 8 0 886.476 C9JG86;Q9BYW2;H7BZ93;H7BXT4;H7C3H4 C9JG86 577 584 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.015043 79.07 By matching By MS/MS 1 1 18433000 8690100 9742900 3418 591 3787 8577;8578 7906 7906 1079 1 LNEQIDSGSKGSLSSR RSIYDTVRLNEQIDSG SKGSLSSRHFTDRTLP R L N S R H 0 1 1 1 0 1 1 2 0 1 2 1 0 0 0 5 0 0 0 0 0 0 16 1 1676.8329 A0A0U1RQJ2 A0A0U1RQJ2 45 60 yes yes 3 0.0067873 56.553 By MS/MS By matching 1 1 5794100 2243500 3550500 3419 339 3788 8579;8580 7907 7907 633 1 LNFDMTASPK IDKQEKVKLNFDMTAS FDMTASPKILMSKPVL K L N P K I 1 0 1 1 0 0 0 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 10 0 1122.5379 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 326 335 ZMYND8 Protein kinase C-binding protein 1 yes no 2 1.9119E-05 130.69 By matching By MS/MS 1 1 16971000 9993000 6978200 3420 69 3789 8581;8582 7908 7908 119 1 LNGPGENVSEDEAQSSNQR SKENRETKLNGPGENV EAQSSNQRKRANKHKW K L N Q R K 1 1 3 1 0 2 3 2 0 0 1 0 0 0 1 3 0 0 0 1 0 0 19 0 2029.8937 H0Y9K3;D6R9W6;D6RJB0;Q659C4;G3V0E9 H0Y9K3 21 39 LARP1B La-related protein 1B yes no 2;3 0.0036938 57.829 By matching By MS/MS 2 2 30730000 17525000 13205000 3421 648 3790 8583;8584;8585;8586 7909;7910 7910 1166 2 LNGPQDHSHLLYSTIPR RQKFSDLKLNGPQDHS LLYSTIPRMQEPGQIV K L N P R M 0 1 1 1 0 1 0 1 2 1 3 0 0 0 2 2 1 0 1 0 0 0 17 0 1946.9963 C9JZR2;O60716;E9PKL1 C9JZR2 85 101 CTNND1 Catenin delta-1 yes no 3 0.00070967 70.451 By MS/MS By matching 1 1 30380000 17400000 12980000 3422 624 3791 8587;8588 7911;7912 7912 7334 2 LNHSPPQSSSR REKKFSRRLNHSPPQS SPPQSSSRYRENRSRD R L N S R Y 0 1 1 0 0 1 0 0 1 0 1 0 0 0 2 4 0 0 0 0 0 0 11 0 1208.5898 A0A087X0H9;Q5T8P6 A0A087X0H9 124 134 RBM26 RNA-binding protein 26 yes no 2;3 0.00015185 113.54 By MS/MS By MS/MS 3 4 75123000 25611000 49511000 3423 126 3792 8589;8590;8591;8592;8593;8594;8595 7913;7914;7915;7916;7917;7918;7919;7920;7921 7920 224 9 LNHVAAGLVSPSLK LMSTVDPKLNHVAAGL GLVSPSLKSDTSSKEI K L N L K S 2 0 1 0 0 0 0 1 1 0 3 1 0 0 1 2 0 0 0 2 0 0 14 0 1404.8089 Q5T757;Q05519;Q5T760 Q5T757 138 151 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2;3 2.331E-27 171.15 By MS/MS By MS/MS 2 2 340370000 186410000 153960000 3424 1853 3793 8596;8597;8598;8599 7922;7923;7924;7925 7923 3488 4 LNHVAAGLVSPSLKSDTSSK LMSTVDPKLNHVAAGL LKSDTSSKEIEEAMKR K L N S K E 2 0 1 1 0 0 0 1 1 0 3 2 0 0 1 5 1 0 0 2 0 0 20 1 2010.0746 Q5T757;Q05519;Q5T760 Q5T757 138 157 SRSF11 Serine/arginine-rich splicing factor 11 yes no 3 0.022554 43.035 By matching By MS/MS 1 1 39069000 23654000 15415000 3425 1853 3794 8600;8601 7926 7926 3488 1 LNKVSENQQVPYMNTIK L N I K 0 0 3 0 0 2 1 0 0 1 1 2 1 0 1 1 1 0 1 2 0 0 17 1 2005.0303 REV__Q562F6 yes yes 2 0.00011822 87.647 By MS/MS By matching 1 1 189940000 165690000 24254000 + 3426 2998 3795 8602;8603 7927 7927 6189 1 LNLGTDSDSSPQK TGDISVEKLNLGTDSD DSDSSPQKSSRDPPSS K L N Q K S 0 0 1 2 0 1 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 13 0 1360.647 Q16512;K7EN76 Q16512 553 565 PKN1 Serine/threonine-protein kinase N1 yes no 2 4.0876E-05 118.73 By matching By MS/MS 1 1 23734000 11492000 12242000 3427 2015 3796 8604;8605 7928 7928 3928;3929 1 LNLTSPK PLSSPNIKLNLTSPKR KLNLTSPKRGQKREEG K L N P K R 0 0 1 0 0 0 0 0 0 0 2 1 0 0 1 1 1 0 0 0 0 0 7 0 771.44905 A0A0A0MQZ8;H0Y7Y3;H0Y785;H0Y472;H0Y4P6;Q8IWZ3 A0A0A0MQZ8 58 64 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes no 2 0.0047311 113.66 By MS/MS By matching 1 1 16012000 9311500 6700300 3428 166 3797 8606;8607 7929;7930 7930 296;6265 2 LNQEIRMMKNQR STERTVSKLNQEIRMM IRMMKNQRVQLMRQMK K L N Q R V 0 2 2 0 0 2 1 0 0 1 1 1 2 0 0 0 0 0 0 0 0 0 12 2 1559.8024 O95239 O95239 636 647 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.0096207 57.96 By MS/MS 1 0 0 0 3429 1480 3798 8608 7931 7931 176 1 LNQPGTPTR GWLCKTLRLNQPGTPT NQPGTPTRTAV_____ R L N T R T 0 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 2 0 0 0 0 0 9 0 982.51959 G5E9C7;P36507;M0R1B6 G5E9C7 292 300 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 2 0.0078107 119.74 By MS/MS By MS/MS 1 1 251920000 132810000 119110000 3430 993 3799 8609;8610 7932;7933 7933 6501 2 LNQPGTPTRTAV GWLCKTLRLNQPGTPT GTPTRTAV________ R L N A V - 1 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 3 0 0 1 0 0 12 1 1253.6728 G5E9C7;P36507;M0R1B6 G5E9C7 292 303 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 2 0.022631 85.672 By matching By MS/MS 1 1 405730000 218920000 186810000 3431 993 3800 8611;8612 7934 7934 6501 1 LNQSSPDNVTDTK SILNSNIKLNQSSPDN PDNVTDTKGALSPITD K L N T K G 0 0 2 2 0 1 0 0 0 0 1 1 0 0 1 2 2 0 0 1 0 0 13 0 1417.6685 Q08AD1 Q08AD1 595 607 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 0.0007958 96.135 By MS/MS By MS/MS 1 1 10983000 5111100 5872000 3432 1868 3801 8613;8614 7935;7936 7936 3516 0 LNRGSLSLDDFR ESPTRNSKLNRGSLSL SLSLDDFRNTQKRGES K L N F R N 0 2 1 2 0 0 0 1 0 0 3 0 0 1 0 2 0 0 0 0 0 0 12 1 1391.7157 Q9Y5W7 Q9Y5W7 481 492 SNX14 Sorting nexin-14 yes yes 3 0.01343 61.165 By MS/MS 1 0 0 0 3433 2939 3802 8615 7937 7937 6105 1 LNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGR TAVADTRRLNSKPQDL PQTVGVGRARFTTYEV R L N G R A 1 1 3 3 0 2 1 3 0 2 3 1 0 2 4 2 2 0 1 2 0 0 33 1 3601.8053 A0A087X0R6;Q9UMY4 A0A087X0R6 12 44 SNX12 Sorting nexin-12 yes no 3 3.2291E-05 62.945 By MS/MS 1 18787000 18787000 0 3434 131 3803 8616 7938 7938 7179 1 LNSKWDLR KYNIMLVRLNSKWDLR LNSKWDLRRLCKTVGA R L N L R R 0 1 1 1 0 0 0 0 0 0 2 1 0 0 0 1 0 1 0 0 0 0 8 1 1030.556 P50990;H7C4C8 P50990 315 322 CCT8 T-complex protein 1 subunit theta yes no 2 0.024985 73.666 By MS/MS By matching 1 1 6015700 3782500 2233200 3435 1741 3804 8617;8618 7939 7939 1 LNSPLEK VDSGKTVKLNSPLEKI KLNSPLEKINSFSPQK K L N E K I 0 0 1 0 0 0 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 7 0 799.44397 Q9BX63;J3QSE8 Q9BX63 195 201 BRIP1 Fanconi anemia group J protein yes no 2 0.0070678 104.01 By MS/MS By MS/MS 1 1 5920100 2973800 2946400 3436 2595 3805 8619;8620 7940;7941 7940 5255 2 LNSPTTTSQIMAR QSTSSVIRLNSPTTTS TTSQIMARKKRRGIIE R L N A R K 1 1 1 0 0 1 0 0 0 1 1 0 1 0 1 2 3 0 0 0 0 0 13 0 1418.7188 Q9UBP5 Q9UBP5 37 49 HEY2 Hairy/enhancer-of-split related with YRPW motif protein 2 yes yes 2 0.0061768 69.451 By MS/MS By matching 1 1 5340800 3105500 2235300 3437 2801 3806 8621;8622 7942;7943 7942 5743 2 LNSQDSYNNFTNNNPGNPR SGSPLHGKLNSQDSYN NNNPGNPRLSPLPSLM K L N P R L 0 1 7 1 0 1 0 1 0 0 1 0 0 1 2 2 1 0 1 0 0 0 19 0 2164.9522 K7ESE9;Q9H6U6 K7ESE9 269 287 BCAS3 Breast carcinoma-amplified sequence 3 yes no 2 0.026728 48.229 By matching By MS/MS 1 1 5990700 3198700 2792000 3438 1292 3807 8623;8624 7944 7944 1 LNSSDPSLIGLK MRDPTFVRLNSSDPSL DPSLIGLKQYYKVVNS R L N L K Q 0 0 1 1 0 0 0 1 0 1 3 1 0 0 1 3 0 0 0 0 0 0 12 0 1242.682 Q9UHI6 Q9UHI6 266 277 DDX20 Probable ATP-dependent RNA helicase DDX20 yes yes 2 0.0037734 79.633 By MS/MS 1 1390900 1390900 0 3439 2814 3808 8625 7945 7945 5779 1 LNSSENGEDRHK SSDKGRERLNSSENGE ENGEDRHKRKERKSSR R L N H K R 0 1 2 1 0 0 2 1 1 0 1 1 0 0 0 2 0 0 0 0 0 0 12 1 1384.6331 Q7L4I2;H0YGP9;E1B6W4 Q7L4I2 102 113 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 3 0.0040342 69.216 By MS/MS By matching 1 1 14400000 6026800 8373000 3440 2200 3809 8626;8627 7946 7946 4382 1 LNTSDFQK FGDLPRPRLNTSDFQK LNTSDFQKLKRKY___ R L N Q K L 0 0 1 1 0 1 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 8 0 951.46616 Q96B36 Q96B36 244 251 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.025182 107.45 By MS/MS 1 93886000 0 93886000 3441 2460 3810 8628 7947 7947 6995 1 LNTSDFQKLK FGDLPRPRLNTSDFQK TSDFQKLKRKY_____ R L N L K R 0 0 1 1 0 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 10 1 1192.6452 Q96B36 Q96B36 244 253 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2;3 2.6254E-13 171.62 By MS/MS By MS/MS 2 2 80533000 45507000 35026000 3442 2460 3811 8629;8630;8631;8632 7948;7949;7950;7951 7949 6995 4 LNTSDFQKLKR FGDLPRPRLNTSDFQK SDFQKLKRKY______ R L N K R K 0 1 1 1 0 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 11 2 1348.7463 Q96B36 Q96B36 244 254 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 3 0.0014395 110.38 By MS/MS By MS/MS 1 1 41957000 20884000 21073000 3443 2460 3812 8633;8634 7952;7953 7952 6995 2 LNTVASPK SKKIKLDRLNTVASPK LNTVASPKDCQELASI R L N P K D 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 8 0 828.47052 Q96T58 Q96T58 1057 1064 SPEN Msx2-interacting protein yes yes 2 0.0059225 105.4 By MS/MS By MS/MS 1 2 2994800 1616300 1378600 3444 2545 3813 8635;8636;8637 7954;7955;7956 7954 5146 3 LNVEPDYLEVLEK EYLELKAKLNVEPDYL DYLEVLEKQTTFSQF_ K L N E K Q 0 0 1 1 0 0 3 0 0 0 3 1 0 0 1 0 0 0 1 2 0 0 13 0 1559.8083 O94991 O94991 939 951 SLITRK5 SLIT and NTRK-like protein 5 yes yes 2 7.0141E-11 134.75 By MS/MS By MS/MS 1 1 13352000 7272900 6079300 3445 1471 3814 8638;8639 7957;7958;7959 7959 7537 3 LNVLEKSSPGHR AISKLEARLNVLEKSS EKSSPGHRATAPQTQH R L N H R A 0 1 1 0 0 0 1 1 1 0 2 1 0 0 1 2 0 0 0 1 0 0 12 1 1335.7259 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;E9PPR1;E9PL12;E9PN91;E9PMW7;E9PK06;H0YCK7 E9PL71 88 99 EEF1D Elongation factor 1-delta yes no 2;3 1.4758E-10 146.96 By MS/MS By MS/MS 2 2 77661000 36598000 41063000 3446 143 3815 8640;8641;8642;8643 7960;7961;7962;7963 7960 251;252 4 LNVWDLSK ASSGTDRRLNVWDLSK LNVWDLSKIGEEQSAE R L N S K I 0 0 1 1 0 0 0 0 0 0 2 1 0 0 0 1 0 1 0 1 0 0 8 0 973.52328 E9PC52;Q16576;Q5JNZ6;H0YEU5;Q5JP02;H0YCT5;H0YF10;H0YDK2;Q09028 E9PC52 332 339 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 yes no 2 0.017166 89.698 By MS/MS By matching 1 1 1978100 1135400 842720 3447 761 3816 8644;8645 7964 7964 1 LPATAAEPEAAVISNGEH SPAKKVPRLPATAAEP AVISNGEH________ R L P E H - 5 0 1 0 0 0 3 1 1 1 1 0 0 0 2 1 1 0 0 1 0 0 18 0 1775.869 Q01581 Q01581 503 520 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 2 3.9119E-08 114.99 By MS/MS By MS/MS 1 1 19554000 11458000 8096300 3448 1831 3817 8646;8647 7965;7966 7965 19 3428 2 LPDLSPVENK AGPIKAQKLPDLSPVE DLSPVENKEHKPGPIG K L P N K E 0 0 1 1 0 0 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1110.5921 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2103 2112 PRRC2C Protein PRRC2C yes no 2 8.6134E-05 117.86 By MS/MS By MS/MS 1 1 23791000 13213000 10578000 3449 715 3818 8648;8649 7967;7968 7968 1267 2 LPDSDDDEDEETAIQR QVTLQDYRLPDSDDDE DEETAIQRVLQQLTEE R L P Q R V 1 1 0 5 0 1 3 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 16 0 1846.7705 H3BRM1;H3BRF9;Q96K21 H3BRM1 259 274 ZFYVE19 Abscission/NoCut checkpoint regulator yes no 2 9.8159E-29 159.34 By MS/MS By MS/MS 1 1 33822000 18573000 15249000 3450 1136 3819 8650;8651 7969;7970 7970 2071 2 LPDSPALAK HPGSLVEKLPDSPALA PDSPALAKKALLALNH K L P A K K 2 0 0 1 0 0 0 0 0 0 2 1 0 0 2 1 0 0 0 0 0 0 9 0 910.51238 H0YDB2;E9PNJ4;Q13586;G0XQ39 H0YDB2 334 342 STIM1 Stromal interaction molecule 1 yes no 2 0.010457 73.841 By MS/MS By MS/MS 1 1 1618600 1618600 0 3451 832 3820 8652;8653 7971;7972 7971 1503 2 LPEASQSPLVLK IKAECTARLPEASQSP SQSPLVLKQAVRKPLE R L P L K Q 1 0 0 0 0 1 1 0 0 0 3 1 0 0 2 2 0 0 0 1 0 0 12 0 1280.734 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 308 319 MTA1 Metastasis-associated protein MTA1 yes no 2 0.0026645 87.083 By MS/MS By MS/MS 1 1 15369000 9163800 6205200 3452 735 3821 8654;8655 7973;7974 7973 1315;1316 2 LPGLGEPEVEYETLKDTSEK NDVNVATRLPGLGEPE TLKDTSEKLKQLEMEN R L P E K L 0 0 0 1 0 0 5 2 0 0 3 2 0 0 2 1 2 0 1 1 0 0 20 1 2233.1002 Q9HCM4 Q9HCM4 489 508 EPB41L5 Band 4.1-like protein 5 yes yes 3 0.0017877 61.52 By MS/MS By MS/MS 1 1 15254000 7586900 7666800 3453 2695 3822 8656;8657 7975;7976;7977 7976 7898 3 LPGLVFLYMEK IDQRVLEKLPGLVFLY LVFLYMEKNQLEEVPS K L P E K N 0 0 0 0 0 0 1 1 0 0 3 1 1 1 1 0 0 0 1 1 0 0 11 0 1308.7152 P51888 P51888 149 159 PRELP Prolargin yes yes 2 0.00047887 110.76 By matching By MS/MS 1 1 3032600 1550000 1482600 3454 1751 3823 8658;8659 7978 7978 1 LPGSGAVQAASPER APGARLLRLPGSGAVQ VQAASPERAGWTEALR R L P E R A 3 1 0 0 0 1 1 2 0 0 1 0 0 0 2 2 0 0 0 1 0 0 14 0 1338.6892 Q86U90 Q86U90 50 63 YRDC YrdC domain-containing protein, mitochondrial yes yes 2 4.7788E-12 130.64 By MS/MS By MS/MS 1 2 14779000 6680600 8098600 3455 2234 3824 8660;8661;8662 7979;7980 7979 4475 2 LPIFSRLSISDD PTLDNSRRLPIFSRLS SRLSISDD________ R L P D D - 0 1 0 2 0 0 0 0 0 2 2 0 0 1 1 3 0 0 0 0 0 0 12 1 1361.7191 Q07352;P47974 Q07352 327 338 ZFP36L1;ZFP36L2 Zinc finger protein 36, C3H1 type-like 1;Zinc finger protein 36, C3H1 type-like 2 yes no 2 9.7143E-09 134.68 By MS/MS By MS/MS 1 1 23459000 16429000 7030600 3456 1861 3825 8663;8664 7981;7982 7982 3502 2 LPLCSLPGEPGNGPDQQLQRSPPEFQ VEDKGACRLPLCSLPG QRSPPEFQ________ R L P F Q - 0 1 1 1 1 4 2 3 0 0 4 0 0 1 6 2 0 0 0 0 0 0 26 1 2860.3814 Q96GX2 Q96GX2 72 97 ATXN7L3B Putative ataxin-7-like protein 3B yes yes 3 0.013007 44.258 By MS/MS By matching 1 1 7292300 6310500 981800 3457 2492 3826 8665;8666 7983 7983 5020 1 LPLLPPESPGPLR ERRGGGLRLPLLPPES PESPGPLRQRHVACLA R L P L R Q 0 1 0 0 0 0 1 1 0 0 4 0 0 0 5 1 0 0 0 0 0 0 13 0 1384.8078 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5 A0A0G2JMS7 765 777 SCRIB Protein scribble homolog yes no 2 1.3765E-11 146.67 By MS/MS By MS/MS 1 1 38094000 19587000 18508000 3458 322 3827 8667;8668 7984;7985;7986;7987;7988;7989;7990;7991 7991 593 8 LPLQDVYK RPTDKPLRLPLQDVYK LPLQDVYKIGGIGTVP R L P Y K I 0 0 0 1 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 8 0 974.54368 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01;Q05639 P68104 248 255 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha;Elongation factor 1-alpha 2 yes no 2 0.013284 95.909 By MS/MS By MS/MS 1 1 4039700 1890800 2148800 3459 1809 3828 8669;8670 7992;7993 7992 2 LPLVPESPR GLEGRPERLPLVPESP PLVPESPRRMMTRSQD R L P P R R 0 1 0 0 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 9 0 1006.5811 C9J0I9;Q86WB0 C9J0I9 272 280 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.0031583 101.93 By MS/MS By MS/MS 1 1 16904000 9256700 7647500 3460 551 3829 8671;8672 7994;7995 7995 1003 2 LPLVPESPRR GLEGRPERLPLVPESP LVPESPRRMMTRSQDA R L P R R M 0 2 0 0 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 10 1 1162.6822 C9J0I9;Q86WB0 C9J0I9 272 281 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 8.3986E-06 151.26 By MS/MS By MS/MS 2 3 60701000 31093000 29607000 3461 551 3830 8673;8674;8675;8676;8677 7996;7997;7998;7999 7996 1003 4 LPNNSSRPSTPTINVLESK PGGRRRGRLPNNSSRP TINVLESKDTDSDREA R L P S K D 0 1 3 0 0 0 1 0 0 1 2 1 0 0 3 4 2 0 0 1 0 0 19 1 2053.0804 Q15910 Q15910 358 376 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 3 0.0036082 58.09 By matching By MS/MS 1 1 7153900 3131700 4022200 3462 2013 3831 8678;8679 8000 8000 3922;3923 1 LPNSIASR IKGLSLERLPNSIASR LPNSIASRFRLTEREE R L P S R F 1 1 1 0 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 0 856.47667 H7C055;G5E9G4;Q9ULT0 H7C055 179 186 TTC7A Tetratricopeptide repeat protein 7A yes no 2 0.012959 82.831 By MS/MS By matching 1 1 4381900 2085500 2296400 3463 995 3832 8680;8681 8001 8001 1823 1 LPPQTPEPLPK TYCLPQRKLPPQTPEP QTPEPLPKACSNPSQQ K L P P K A 0 0 0 0 0 1 1 0 0 0 2 1 0 0 5 0 1 0 0 0 0 0 11 0 1215.6863 Q86YN6 Q86YN6 304 314 PPARGC1B Peroxisome proliferator-activated receptor gamma coactivator 1-beta yes yes 3 0.0058317 72.096 By MS/MS 1 6891800 0 6891800 3464 2255 3833 8682 8002 8002 1 LPPYPYSSPSLVLPTQPHTPK SKLSTDQRLPPYPYSS PTQPHTPKSLQQPGLP R L P P K S 0 0 0 0 0 1 0 0 1 0 3 1 0 0 7 3 2 0 2 1 0 0 21 0 2318.2311 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 483 503 CRTC2 CREB-regulated transcription coactivator 2 yes no 3 0.010493 51.611 By MS/MS 1 1879200 1879200 0 3465 2054 3834 8683 8003 8003 6866 1 LPQPPEGQCYSN MMSKENMKLPQPPEGQ PEGQCYSN________ K L P S N - 0 0 1 0 1 2 1 1 0 0 1 0 0 0 3 1 0 0 1 0 0 0 12 0 1388.6031 A0A0A0MSL3;G3V2F7;I3L0A0;Q13404 A0A0A0MSL3 92 103 UBE2V1;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1 yes no 2 0.0016982 93.348 By MS/MS By MS/MS 1 1 7005900 4193500 2812400 3466 220 3835 8684;8685 8004;8005 8004 403 2 LPQTSDDEKKDF QVHTRRPKLPQTSDDE SDDEKKDF________ K L P D F - 0 0 0 3 0 1 1 0 0 0 1 2 0 1 1 1 1 0 0 0 0 0 12 2 1421.6674 Q9GZT3 Q9GZT3 98 109 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2;3 1.5804E-06 127.71 By MS/MS By MS/MS 2 2 37968000 19588000 18379000 3467 2623 3836 8686;8687;8688;8689 8006;8007;8008 8006 5325 3 LPSAQTPNGTDYVASGK KQPPPSIRLPSAQTPN TDYVASGKSIQTPQSH R L P G K S 2 0 1 1 0 1 0 2 0 0 1 1 0 0 2 2 2 0 1 1 0 0 17 0 1704.8319 E7EPN9;Q9Y520;H7C5N8 E7EPN9 1962 1978 PRRC2C Protein PRRC2C yes no 2 0.00015901 89.344 By MS/MS By matching 2 2 10995000 6631200 4363600 3468 715 3837 8690;8691;8692;8693 8009;8010 8010 6417;7356 2 LPSGLPVSLLTLYLDNNK LSFNQIARLPSGLPVS TLYLDNNKISNIPDEY R L P N K I 0 0 2 1 0 0 0 1 0 0 6 1 0 0 2 2 1 0 1 1 0 0 18 0 1956.0932 P51884;CON__Q05443 P51884 199 216 LUM Lumican yes no 2 1.6062E-05 96.135 By MS/MS 1 11184000 0 11184000 3469 1750 3838 8694 8011 8011 1 LPSGSGAASPTGSAVDIR QSGKTVIRLPSGSGAA TGSAVDIRAGAISASG R L P I R A 3 1 0 1 0 0 0 3 0 1 1 0 0 0 2 4 1 0 0 1 0 0 18 0 1641.8322 Q09666 Q09666 208 225 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 1.1107E-05 88.311 By MS/MS By MS/MS 1 1 8147600 4528200 3619400 3470 1871 3839 8695;8696 8012;8013 8013 3542;3543 2 LPSLGNKEPPGQEK LQGNVNGRLPSLGNKE KEPPGQEKVQLKRKVT R L P E K V 0 0 1 0 0 1 2 2 0 0 2 2 0 0 3 1 0 0 0 0 0 0 14 1 1492.7886 Q9UPY5 Q9UPY5 24 37 SLC7A11 Cystine/glutamate transporter yes yes 2;3 0.0045237 70.438 By MS/MS By matching 2 2 15968000 10299000 5669300 3471 2874 3840 8697;8698;8699;8700 8014;8015 8015 5939 2 LPSPEPSMSPK SLTGSYAKLPSPEPSM PEPSMSPKMHRRRSRT K L P P K M 0 0 0 0 0 0 1 0 0 0 1 1 1 0 4 3 0 0 0 0 0 0 11 0 1168.5798 O43303 O43303 364 374 CCP110 Centriolar coiled-coil protein of 110 kDa yes yes 2 0.00023864 111.12 By MS/MS By MS/MS 1 1 8916400 4665900 4250400 3472 1377 3841 8701;8702 8016;8017 8016 2520;2521 2 LPSQAYIDLPLGK HRKPKQIKLPSQAYID YIDLPLGKDAQRENPA K L P G K D 1 0 0 1 0 1 0 1 0 1 3 1 0 0 2 1 0 0 1 0 0 0 13 0 1413.7868 Q5TCX8;X6R610 Q5TCX8 664 676 MLK4;KIAA1804 Mitogen-activated protein kinase kinase kinase MLK4 yes no 2 0.0030177 72.29 By MS/MS By MS/MS 1 1 2435400 1273200 1162200 3473 2110 3842 8703;8704 8018;8019 8019 7746 2 LPSSPLGCR PHFQGFQKLPSSPLGC PSSPLGCRKSLLGSTA K L P C R K 0 1 0 0 1 0 0 1 0 0 2 0 0 0 2 2 0 0 0 0 0 0 9 0 985.5015 C9JWC4;Q8NCD3 C9JWC4 554 562 HJURP Holliday junction recognition protein yes no 2 0.011792 72.2 By matching By MS/MS 1 1 6518900 3917000 2601900 3474 612 3843 8705;8706 8020;8021 8021 1120 2 LPSSPVYEDAASFK APQPTEERLPSSPVYE YEDAASFKAELSYRGP R L P F K A 2 0 0 1 0 0 1 0 0 0 1 1 0 1 2 3 0 0 1 1 0 0 14 0 1509.7351 Q14247;H0YEV2;H0YCD9 Q14247 415 428 CTTN Src substrate cortactin yes no 2 8.4498E-14 143.46 By MS/MS By MS/MS 1 1 57490000 33179000 24311000 3475 1945 3844 8707;8708 8022;8023 8022 3753;7701 2 LPYELQKMPNGSAGVK IVQTERIRLPYELQKM PNGSAGVKIPSFFTDA R L P V K I 1 0 1 0 0 1 1 2 0 0 2 2 1 0 2 1 0 0 1 1 0 0 16 1 1730.9025 D6RJ96;E9PDE8;O95757 D6RJ96 87 102 HSPA4L Heat shock 70 kDa protein 4L yes no 2 0.028123 45.077 By matching By MS/MS 1 1 1527900 689030 838830 3476 686 3845 8709;8710 8024 8024 7347 1 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR LKAELMERLQAALDDE LGGDSAGRSGAGLEQE R L Q G R S 5 2 1 4 0 1 3 7 0 0 4 0 1 0 2 2 0 0 0 0 0 0 32 1 3125.432 Q00839 Q00839 38 69 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3 3.7538E-07 73.616 By MS/MS By MS/MS 4 4 248200000 140730000 107470000 3477 1827 3846;3847;3848;3849 8711;8712;8713;8714;8715;8716;8717;8718 8025;8026;8027;8028;8029;8030 8028 236 3420 6 LQAKESPQR CLAWAPARLQAKESPQ QAKESPQRKKRKSEAV R L Q Q R K 1 1 0 0 0 2 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1055.5724 Q15061 Q15061 72 80 WDR43 WD repeat-containing protein 43 yes yes 2 0.0056902 100.09 By MS/MS By MS/MS 1 1 109450000 63813000 45640000 3478 1976 3850 8719;8720 8031;8032;8033 8033 3849 3 LQAKESPQRK CLAWAPARLQAKESPQ AKESPQRKKRKSEAVG R L Q R K K 1 1 0 0 0 2 1 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 10 2 1183.6673 Q15061 Q15061 72 81 WDR43 WD repeat-containing protein 43 yes yes 3 0.014043 64.224 By matching By MS/MS 1 1 32801000 333560 32468000 3479 1976 3851 8721;8722 8034 8034 3849 1 LQALKEEPQTVPEMPGETPPLSPIDMESQER QMPVQHPRLQALKEEP IDMESQERIKAERKRM R L Q E R I 1 1 0 1 0 3 6 1 0 1 3 1 2 0 6 2 2 0 0 1 0 0 31 1 3475.6851 P05412 P05412 222 252 JUN Transcription factor AP-1 yes yes 3 1.8573E-10 77.917 By MS/MS By MS/MS 1 1 43278000 26679000 16599000 3480 1525 3852 8723;8724 8035;8036 8036 2812 2 LQAPDSATLLEK PPRSTFSRLQAPDSAT DSATLLEKMKLKDSLF R L Q E K M 2 0 0 1 0 1 1 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 12 0 1284.6925 A0A087WVQ2;I3L0Y2;I3L4Q4;Q9BUL5 A0A087WVQ2 119 130 PHF23 PHD finger protein 23 yes no 2 0.0068602 94.673 By MS/MS By MS/MS 1 1 17448000 9940300 7508000 3481 64 3853 8725;8726 8037;8038 8038 6229 2 LQDEANYHLYGSR NEPSLQSKLQDEANYH NYHLYGSRMDRQTKQQ K L Q S R M 1 1 1 1 0 1 1 1 1 0 2 0 0 0 0 1 0 0 2 0 0 0 13 0 1564.727 Q13546 Q13546 378 390 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 3 0.0043558 63.292 By MS/MS By MS/MS 1 1 9366100 4901600 4464500 3482 1924 3854 8727;8728 8039;8040 8040 3712;7692 2 LQDEAYQVSLQG MEEYLKQKLQDEAYQV AYQVSLQG________ K L Q Q G - 1 0 0 1 0 3 1 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 12 0 1349.6463 M0R0C4;M0QZ28;Q9Y4J8 M0R0C4 158 169 DTNA Dystrobrevin alpha yes no 2 0.0010717 92.239 By MS/MS 1 3062400 3062400 0 3483 1309 3855 8729 8041 8041 7492 1 LQDISELLATGAGLSESEAEPDGDHNITELPQAVAGR EKFPNMSRLQDISELL LPQAVAGRGNMRAQQS R L Q G R G 5 1 1 3 0 2 5 4 1 2 5 0 0 0 2 3 2 0 0 1 0 0 37 0 3802.8497 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;C9J3W3 A8MV53 171 207 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 4 1.0337E-13 79.877 By MS/MS By matching 1 1 48346000 44612000 3733600 3484 255 3856 8730;8731 8042 8042 463 1 LQEDPNYSPQRFPNAQR LRSDIQKRLQEDPNYS QRFPNAQRAFADDP__ R L Q Q R A 1 2 2 1 0 3 1 0 0 0 1 0 0 1 3 1 0 0 1 0 0 0 17 1 2058.9872 A0A024RCR6;A0A0G2JK23;P46379;A0A0G2JL47;H0Y710;H0Y4L1 A0A024RCR6 1104 1120 BAT3;BAG6 Large proline-rich protein BAG6 yes no 3 0.025394 44.807 By matching By MS/MS 1 1 60667000 36197000 24471000 3485 4 3857 8732;8733 8043 8043 1 LQEEGGGSDEEETGSPSEDGMQSAR LIAEAKEKLQEEGGGS EDGMQSARTQARPREP K L Q A R T 1 1 0 2 0 2 6 5 0 0 1 0 1 0 1 4 1 0 0 0 0 0 25 0 2581.0358 Q13610 Q13610 43 67 PWP1 Periodic tryptophan protein 1 homolog yes yes 2;3 1.8937E-13 94.203 By MS/MS By MS/MS 1 2 39614000 0 39614000 3486 1929 3858 8734;8735;8736 8044;8045;8046 8046 3724 3 LQEEQDGGSSDEDRAGPAPPGASDGVDIQDVK GRRRKVLRLQEEQDGG GVDIQDVKFKLRHDLA R L Q V K F 3 1 0 6 0 3 3 5 0 1 1 1 0 0 3 3 0 0 0 2 0 0 32 1 3238.4498 H7C504;Q14147 H7C504 130 161 DHX34 Probable ATP-dependent RNA helicase DHX34 yes no 3 0.00021112 59.094 By MS/MS By matching 1 1 38837000 19111000 19726000 3487 1188 3859 8737;8738 8047 8047 2152;2153 1 LQELESCSGLGSTSDDTDVR PDLKQEERLQELESCS TSDDTDVREVSSRPST R L Q V R E 0 1 0 3 1 1 2 2 0 0 3 0 0 0 0 4 2 0 0 1 0 0 20 0 2167.9539 Q14C86;H0Y7I9;C9IZ08;H0Y4E7;F8W9S7;B4DGD8 Q14C86 735 754 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2;3 3.076E-50 163.85 By MS/MS By MS/MS 3 3 63693000 34964000 28729000 3488 1964 3860 8739;8740;8741;8742;8743;8744 8048;8049;8050;8051;8052;8053 8050 3823;3824;6825 6 LQELNAHIVVSDPEDITDCPR KLEELHHKLQELNAHI EDITDCPRTPDTPNND K L Q P R T 1 1 1 3 1 1 2 0 1 2 2 0 0 0 2 1 1 0 0 2 0 0 21 0 2420.1642 Q16513;B1AL79 Q16513 100 120 PKN2 Serine/threonine-protein kinase N2 yes no 3 0.00064378 67.778 By MS/MS By matching 1 1 4468300 3181500 1286800 3489 2016 3861 8745;8746 8054;8055 8054 3939 2 LQHQQLYYSQDDSNRK PAREQNRRLQHQQLYY SQDDSNRKNFDAYRLY R L Q R K N 0 1 1 2 0 4 0 0 1 0 2 1 0 0 0 2 0 0 2 0 0 0 16 1 2021.9555 A0A0D9SF60;Q99569 Q99569 1107 1122 PKP4 Plakophilin-4 no no 3 7.6313E-20 143.64 By MS/MS By MS/MS 1 1 12611000 6862700 5748000 3490 314;2552 3862 8747;8748 8056;8057 8056 7226;7227 2 LQHSTSILR QQRTRRPKLQHSTSIL QHSTSILRKQAEEEAI K L Q L R K 0 1 0 0 0 1 0 0 1 1 2 0 0 0 0 2 1 0 0 0 0 0 9 0 1053.5931 A0A087WWK8;Q6DN90 A0A087WWK8 70 78 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2 0.0031378 92.943 By MS/MS By MS/MS 1 1 21920000 11112000 10808000 3491 78 3863 8749;8750 8058;8059 8058 137 2 LQKLESPVAH AAELRRRRLQKLESPV KLESPVAH________ R L Q A H - 1 0 0 0 0 1 1 0 1 0 2 1 0 0 1 1 0 0 0 1 0 0 10 1 1120.6241 Q86TM6 Q86TM6 608 617 SYVN1 E3 ubiquitin-protein ligase synoviolin yes yes 2 0.0007795 109.16 By MS/MS By MS/MS 1 1 10508000 5704100 4803400 3492 2230 3864 8751;8752 8060;8061 8061 4470 2 LQLDNQYAVLENQK VSKNQALKLQLDNQYA YAVLENQKSSHSQYN_ K L Q Q K S 1 0 2 1 0 3 1 0 0 0 3 1 0 0 0 0 0 0 1 1 0 0 14 0 1674.8577 Q9UKY7;D6R9V8 Q9UKY7 238 251 CDV3 Protein CDV3 homolog yes no 2;3 7.1408E-46 182.72 By MS/MS By MS/MS 2 2 207200000 132320000 74883000 3493 2839 3865 8753;8754;8755;8756 8062;8063;8064 8063 7940 3 LQLERPVSPETQADLQR IFSKGSRKLQLERPVS ETQADLQRNLVAELRS K L Q Q R N 1 2 0 1 0 3 2 0 0 0 3 0 0 0 2 1 1 0 0 1 0 0 17 1 1979.0436 Q9P206 Q9P206 922 938 KIAA1522 Uncharacterized protein KIAA1522 yes yes 3 0.021148 46.324 By matching By MS/MS 1 1 7283300 4097200 3186000 3494 2779 3866 8757;8758 8065 8065 5709 1 LQLGTPPPLLAAR HGAAASERLQLGTPPP PPPLLAARLVPPRNLM R L Q A R L 2 1 0 0 0 1 0 1 0 0 4 0 0 0 3 0 1 0 0 0 0 0 13 0 1345.8082 Q9P2N5 Q9P2N5 443 455 RBM27 RNA-binding protein 27 yes yes 2 0.005758 101.45 By MS/MS By MS/MS 1 1 16714000 8782700 7931000 3495 2795 3867 8759;8760 8066;8067 8067 7082 2 LQLLEDDKENR KGTNSYYKLQLLEDDK LEDDKENRYWIFRSWG K L Q N R Y 0 1 1 2 0 1 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 11 1 1371.6994 P09874 P09874 572 582 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.0097298 86.463 By MS/MS By MS/MS 1 1 3180700 1627100 1553600 3496 1550 3868 8761;8762 8068;8069 8069 2 LQLQGLDLSSR SLELEVARLQLQGLDL QGLDLSSRSLLGIDTE R L Q S R S 0 1 0 1 0 2 0 1 0 0 4 0 0 0 0 2 0 0 0 0 0 0 11 0 1228.6776 P49454 P49454 1739 1749 CENPF Centromere protein F yes yes 2 0.0016495 95.401 By MS/MS By MS/MS 1 1 2459800 1251000 1208800 3497 1724 3869 8763;8764 8070;8071 8070 3230;3231 2 LQMYFQSPK PPKNLNTKLQMYFQSP QMYFQSPKRSGGGECE K L Q P K R 0 0 0 0 0 2 0 0 0 0 1 1 1 1 1 1 0 0 1 0 0 0 9 0 1140.5638 Q460N5;H7C4Y3 Q460N5 27 35 PARP14 Poly [ADP-ribose] polymerase 14 yes no 2 0.017267 50.791 By matching By MS/MS 1 1 1755200 1088000 667200 3498 2041 3870 8765;8766 8072 8072 273 3997 1 LQPERGSPK AEKHVTQRLQPERGSP QPERGSPKKCEAEEAE R L Q P K K 0 1 0 0 0 1 1 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1010.5509 S4R3H4;E7EQT4;Q9UKV3;A0A087WYN3 S4R3H4 665 673 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 0.0054512 99.343 By MS/MS By MS/MS 2 1 69701000 53576000 16124000 3499 725 3871 8767;8768;8769 8073;8074;8075 8073 1295 3 LQPSSSPENSLDPFPPR RKFGAQFKLQPSSSPE SLDPFPPRILKEEPKG K L Q P R I 0 1 1 1 0 1 1 0 0 0 2 0 0 1 5 4 0 0 0 0 0 0 17 0 1866.9112 Q8WWM7;H3BUF6 Q8WWM7 554 570 ATXN2L Ataxin-2-like protein yes no 2;3 3.9291E-05 86.288 By MS/MS By MS/MS 2 1 57451000 35847000 21604000 3500 2409 3872 8770;8771;8772 8076;8077;8078;8079 8079 4822;4823;4824 4 LQPTWNDLGDKYNSMEDAK PWCGHCQRLQPTWNDL YNSMEDAKVYVAKVDC R L Q A K V 1 0 2 3 0 1 1 1 0 0 2 2 1 0 1 1 1 1 1 0 0 0 19 1 2224.0106 Q8NBS9 Q8NBS9 95 113 TXNDC5 Thioredoxin domain-containing protein 5 yes yes 3 0.0046695 51.606 By MS/MS 1 2258900 0 2258900 3501 2334 3873 8773 8080 8080 313 4672 1 LQQGAGLESPQGQPEPGAASPQR KTSPGSPRLQQGAGLE PGAASPQRQQDLHLES R L Q Q R Q 3 1 0 0 0 5 2 4 0 0 2 0 0 0 4 2 0 0 0 0 0 0 23 0 2302.1302 Q9H6F5 Q9H6F5 72 94 CCDC86 Coiled-coil domain-containing protein 86 yes yes 2;3 1.9501E-25 122.53 By MS/MS By MS/MS 3 3 171880000 110750000 61123000 3502 2666 3874;3875 8774;8775;8776;8777;8778;8779 8081;8082;8083;8084;8085;8086 8083 5439;5440 6 LQQQAALSPTTAPAVSSVSK QEQEIEQRLQQQAALS PAVSSVSKQETIMRHH R L Q S K Q 4 0 0 0 0 3 0 0 0 0 2 1 0 0 2 4 2 0 0 2 0 0 20 0 1983.0637 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 463 482 GATAD2B Transcriptional repressor p66-beta yes no 2;3 1.3171E-13 118.23 By MS/MS By MS/MS 2 2 85678000 51124000 34554000 3503 352 3876 8780;8781;8782;8783 8087;8088;8089;8090 8088 653;6315 4 LQQQAALSPTTAPAVSSVSKQETIMR QEQEIEQRLQQQAALS SKQETIMRHHTLRQAP R L Q M R H 4 1 0 0 0 4 1 0 0 1 2 1 1 0 2 4 3 0 0 2 0 0 26 1 2741.4382 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 463 488 GATAD2B Transcriptional repressor p66-beta yes no 3 0.022903 41.084 By MS/MS By MS/MS 1 1 29352000 15542000 13810000 3504 352 3877 8784;8785 8091;8092 8091 653;6315 2 LQQQHSEQPPLQPSPVMTR MKTRRTTRLQQQHSEQ QPSPVMTRRGLRDSHS R L Q T R R 0 1 0 0 0 5 1 0 1 0 2 0 1 0 4 2 1 0 0 1 0 0 19 0 2200.1059 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 9 27 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 2;3 1.2885E-06 97.623 By MS/MS By MS/MS 5 5 422980000 218870000 204110000 3505 218 3878;3879;3880;3881 8786;8787;8788;8789;8790;8791;8792;8793;8794;8795 8093;8094;8095;8096;8097;8098;8099;8100 8096 23 397;6282 8 LQRLPSSSSEMGSQDGSPLR DSFLKSARLQRLPSSS SQDGSPLRETRKDPFS R L Q L R E 0 2 0 1 0 2 1 2 0 0 3 0 1 0 2 6 0 0 0 0 0 0 20 1 2131.0328 A2A2G5;Q9UJ14 A2A2G5 84 103 GGT7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain yes no 3 0.00036692 73.21 By MS/MS By MS/MS 2 2 32322000 18830000 13492000 3506 394 3882;3883 8796;8797;8798;8799 8101;8102;8103 8101 41 757;758;759;760 1 LQRPPSVDSIIR LQNKIASKLQRPPSVD PSVDSIIRSFIHESSM K L Q I R S 0 2 0 1 0 1 0 0 0 2 1 0 0 0 2 2 0 0 0 1 0 0 12 1 1379.7885 Q1MSJ5 Q1MSJ5 896 907 CSPP1 Centrosome and spindle pole-associated protein 1 yes yes 3 0.0068309 65.528 By MS/MS 1 0 0 0 3507 2025 3884 8800 8104 8104 3959 1 LQSAGSAMPTSSSFK SPALKTTRLQSAGSAM MPTSSSFKHRIKEQED R L Q F K H 2 0 0 0 0 1 0 1 0 0 1 1 1 1 1 5 1 0 0 0 0 0 15 0 1497.7133 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1232 1246 CEP170 Centrosomal protein of 170 kDa yes no 2 1.9846E-06 118.55 By MS/MS By MS/MS 1 1 20220000 11474000 8746500 3508 1006 3885 8801;8802 8105;8106 8105 1843 2 LQSDVLATGPTSNNRWVSR YEQGFFPKLQSDVLAT SNNRWVSRSATAQRRK K L Q S R S 1 2 2 1 0 1 0 1 0 0 2 0 0 0 1 3 2 1 0 2 0 0 19 1 2100.0712 G3V1S3;Q6ZUT9 G3V1S3 693 711 DENND5B DENN domain-containing protein 5B yes no 3 0.023399 44.341 By matching By MS/MS 1 1 5552800 2672600 2880200 3509 960 3886 8803;8804 8107 8107 0 LQSFDSPER RGNDRREKLQSFDSPE QSFDSPERKRIKYSRE K L Q E R K 0 1 0 1 0 1 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 9 0 1077.5091 E9PGM9;P78332 E9PGM9 888 896 RBM6 RNA-binding protein 6 yes no 2 0.0035308 91.469 By MS/MS By MS/MS 1 1 23514000 11993000 11521000 3510 793 3887 8805;8806 8108;8109 8109 1424 2 LQSIGTENTEENR STGSIAKRLQSIGTEN TENTEENRRFYRQLLL R L Q N R R 0 1 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 13 0 1489.7009 J3KPS3;P04075;H3BQN4;H3BUH7;H3BR04;H3BPS8;H3BMQ8 J3KPS3 44 56 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0023196 99.343 By MS/MS By MS/MS 1 1 10439000 4621300 5818100 3511 1232 3888 8807;8808 8110;8111 8110 2 LQSIGTENTEENRR STGSIAKRLQSIGTEN ENTEENRRFYRQLLLT R L Q R R F 0 2 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 14 1 1645.802 J3KPS3;P04075;H3BQN4;H3BUH7;H3BR04;H3BPS8;H3BMQ8 J3KPS3 44 57 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 3 0.009592 63.662 By MS/MS By MS/MS 2 2 25985000 12575000 13410000 3512 1232 3889;3890 8809;8810;8811;8812 8112;8113;8114 8114 2233 3 LQSPLPGESAAK QKKQQEQKLQSPLPGE LPGESAAKKSESATSN K L Q A K K 2 0 0 0 0 1 1 1 0 0 2 1 0 0 2 2 0 0 0 0 0 0 12 0 1196.6401 H0YLX2;Q2KHR2 H0YLX2 223 234 RFX7 DNA-binding protein RFX7 yes no 2 0.0015071 95.273 By MS/MS By MS/MS 1 1 9042000 4630700 4411400 3513 1094 3891 8813;8814 8115;8116 8115 2011 2 LQSSQEPEAPPPR KARRRAAKLQSSQEPE EPEAPPPRDVALLQGR K L Q P R D 1 1 0 0 0 2 2 0 0 0 1 0 0 0 4 2 0 0 0 0 0 0 13 0 1434.7103 Q5H907;Q5H909;Q9UNF1 Q5H907 177 189 MAGED2 Melanoma-associated antigen D2 yes no 2 0.0029303 82.069 By MS/MS By MS/MS 1 2 16533000 2399800 14133000 3514 2066 3892 8815;8816;8817 8117;8118;8119 8117 4056;4057 3 LQTLSPSHK SSSSLGNKLQTLSPSH QTLSPSHKGIAAPHAG K L Q H K G 0 0 0 0 0 1 0 0 1 0 2 1 0 0 1 2 1 0 0 0 0 0 9 0 1009.5556 Q96GY0;H0YAP0 Q96GY0 219 227 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes no 2 0.029148 69.261 By MS/MS 1 0 0 0 3515 2494 3893 8818 8120 8120 1 LQTPNTFPK TPQAKKIKLQTPNTFP QTPNTFPKRKKGEKRA K L Q P K R 0 0 1 0 0 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 0 0 9 0 1044.5604 A0A0A0MRM9;Q14978 A0A0A0MRM9 614 622 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0090033 116.74 By MS/MS By MS/MS 1 1 32101000 18501000 13599000 3516 191 3894 8819;8820 8121;8122 8121 6271;6272 2 LQTPNTFPKR TPQAKKIKLQTPNTFP TPNTFPKRKKGEKRAS K L Q K R K 0 1 1 0 0 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 0 0 10 1 1200.6615 A0A0A0MRM9;Q14978 A0A0A0MRM9 614 623 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0013943 91.961 By MS/MS 1 4182900 4182900 0 3517 191 3895 8821 8123 8123 6271;6272 1 LQTSSVLVSGLR LGHEAMKRLQTSSVLV SVLVSGLRGLGVEIAK R L Q L R G 0 1 0 0 0 1 0 1 0 0 3 0 0 0 0 3 1 0 0 2 0 0 12 0 1258.7245 P22314;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3;Q5JRS2 P22314 70 81 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 0.001516 104.22 By MS/MS 1 1371400 1371400 0 3518 1617 3896 8822 8124 8124 1 LQTTDNLLPMSPEEFDEVSR ________________ EEFDEVSRIVGSVEFD R L Q S R I 0 1 1 2 0 1 3 0 0 0 3 0 1 1 2 2 2 0 0 1 0 0 20 0 2320.0893 H7BZ88;P42224 H7BZ88 7 26 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes no 2 4.5125E-05 79.875 By MS/MS By MS/MS 1 1 13173000 7226700 5946000 3519 1158 3897 8823;8824 8125;8126 8126 2107 2 LQVYEGGGQPPPQDLPGSPK EVAALRKKLQVYEGGG QDLPGSPKSGPPPEHL K L Q P K S 0 0 0 1 0 3 1 4 0 0 2 1 0 0 5 1 0 0 1 1 0 0 20 0 2063.0324 A0A0C4DGP2;A0A0C4DGP5;Q86Y91 A0A0C4DGP2 387 406 KIF18B Kinesin-like protein;Kinesin-like protein KIF18B yes no 2;3 0.0011216 66.613 By MS/MS By MS/MS 2 2 18733000 8285300 10448000 3520 296 3898 8825;8826;8827;8828 8127;8128;8129;8130 8129 528 4 LQWDGSSDLSPSDSGSSK DSQALISRLQWDGSSD PSDSGSSKT_______ R L Q S K T 0 0 0 3 0 1 0 2 0 0 2 1 0 0 1 7 0 1 0 0 0 0 18 0 1851.8123 K7EJK2;K7ENU1;K7EKG9;Q14CW9 K7EJK2 54 71 ATXN7L3 Ataxin-7-like protein 3 yes no 2 0.0048594 63.392 By MS/MS By MS/MS 1 1 13551000 8231500 5319300 3521 1269 3899 8829;8830 8131;8132 8131 2301;2302 2 LRAESPSPPR PPAAPADRLRAESPSP AESPSPPRLLAAHCAL R L R P R L 1 2 0 0 0 0 1 0 0 0 1 0 0 0 3 2 0 0 0 0 0 0 10 1 1108.5989 P50219 P50219 73 82 MNX1 Motor neuron and pancreas homeobox protein 1 yes yes 2 0.018829 72.891 By MS/MS By MS/MS 1 1 14756000 7828700 6927700 3522 1736 3900 8831;8832 8133;8134 8133 3288;3289 0 LRLCDDGPQLPTSPR VQVSREPRLRLCDDGP PQLPTSPRLTAAARSA R L R P R L 0 2 0 2 1 1 0 1 0 0 3 0 0 0 3 1 1 0 0 0 0 0 15 1 1723.8676 H0YAZ3;O60504;H0YB51 H0YAZ3 30 44 SORBS3 Vinexin yes no 2;3 0.0041505 63.212 By MS/MS By MS/MS 2 2 27363000 14085000 13278000 3523 1052 3901 8833;8834;8835;8836 8135;8136 8136 1956;6523 2 LRLDTGSPEPETR STLRSAKRLRLDTGSP GSPEPETRGVTAEGIH R L R T R G 0 2 0 1 0 0 2 1 0 0 2 0 0 0 2 1 2 0 0 0 0 0 13 1 1469.7474 Q9Y2F5 Q9Y2F5 1848 1860 ICE1 Little elongation complex subunit 1 yes yes 2 0.01019 101.75 By MS/MS By matching 1 1 12902000 6860800 6040800 3524 2888 3902 8837;8838 8137 8137 7121 1 LRLEEEALYAAQR ELALQEEKLRLEEEAL EALYAAQREAARAAKQ K L R Q R E 3 2 0 0 0 1 3 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 13 1 1560.826 Q63HQ0 Q63HQ0 102 114 AP1AR AP-1 complex-associated regulatory protein yes yes 3 0.00051541 99.844 By MS/MS By MS/MS 1 1 2967800 1485800 1482100 3525 2127 3903 8839;8840 8138;8139 8138 7753 2 LRLESEGSPETLTNLR KEEERLNKLRLESEGS PETLTNLRKGYLFMYN K L R L R K 0 2 1 0 0 0 3 1 0 0 4 0 0 0 1 2 2 0 0 0 0 0 16 1 1813.9534 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8 H3BPZ1 106 121 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 3 0.010254 53.008 By MS/MS 1 1365200 1365200 0 3526 1127 3904 8841 8140 8140 2059 1 LRLGDVNQFAQSKVVEPGIESTVP LFYDEVRKLRLGDVNQ PGIESTVP________ K L R V P - 1 1 1 1 0 2 2 2 0 1 2 1 0 1 2 2 1 0 0 4 0 0 24 2 2582.3704 H7C2J7 H7C2J7 143 166 STK11IP yes yes 2 0.005748 45.863 By matching By MS/MS 1 1 6787800 4154100 2633600 3527 1175 3905 8842;8843 8141 8141 2134;6549 1 LRLSPSPTSQR LLEGEEERLRLSPSPT SPSPTSQRSRGRASSH R L R Q R S 0 2 0 0 0 1 0 0 0 0 2 0 0 0 2 3 1 0 0 0 0 0 11 1 1240.6888 Q3BDU5;P02545;A0A0C4DGC5;Q5TCI8 Q3BDU5 387 397 LMNA Prelamin-A/C;Lamin-A/C yes no 2;3 0.0020067 96.745 By MS/MS By MS/MS 3 3 65196000 34698000 30497000 3528 1517 3906;3907 8844;8845;8846;8847;8848;8849 8142;8143;8144;8145 8144 2803;2804 4 LRRESPESEGPIYEGLIL HNTLEHLRLRRESPES PIYEGLIL________ R L R I L - 0 2 0 0 0 0 4 2 0 2 3 0 0 0 2 2 0 0 1 0 0 0 18 2 2057.0793 Q96QK1 Q96QK1 779 796 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 3 0.028516 44.294 By MS/MS By matching 1 1 11155000 5000700 6154700 3529 2532 3908 8850;8851 8146 8146 7854 0 LRSADSENALSVQER QYLDPRGRLRSADSEN NALSVQERNVPTKSPS R L R E R N 2 2 1 1 0 1 2 0 0 0 2 0 0 0 0 3 0 0 0 1 0 0 15 1 1673.8333 J3KRN4;J3QRB6;Q99759 J3KRN4 331 345 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 2;3 2.5267E-22 146.84 By MS/MS By MS/MS 1 2 25931000 7983400 17947000 3530 1240 3909 8852;8853;8854 8147;8148;8149 8147 2247;2248 3 LRSDAGLESDTAMK ________________ LESDTAMKKGETLRKQ K L R M K K 2 1 0 2 0 0 1 1 0 0 2 1 1 0 0 2 1 0 0 0 0 0 14 1 1492.7192 Q9NR30 Q9NR30 5 18 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.014617 60.542 By MS/MS 1 0 0 0 3531 2716 3910 8855 8150 8150 5547 1 LRSDGAAIPR GGVMGRVRLRSDGAAI SDGAAIPRRRSGGDTH R L R P R R 2 2 0 1 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 10 1 1054.5883 O43295 O43295 856 865 SRGAP3 SLIT-ROBO Rho GTPase-activating protein 3 yes yes 2 0.012494 71.888 By matching By MS/MS 1 1 9057500 5242900 3814600 3532 1376 3911 8856;8857 8151 8151 2519 1 LRSFSMQDLR SQGALAGRLRSFSMQD SFSMQDLRSISDAPAP R L R L R S 0 2 0 1 0 1 0 0 0 0 2 0 1 1 0 2 0 0 0 0 0 0 10 1 1251.6394 E5RGS2;Q9H6H4 E5RGS2 148 157 REEP4 Receptor expression-enhancing protein;Receptor expression-enhancing protein 4 yes no 2 3.1443E-05 132.86 By MS/MS By MS/MS 1 1 19588000 10767000 8820200 3533 695 3912 8858;8859 8152;8153 8152 1235 2 LRSPFLQK ISSPQPGKLRSPFLQK LRSPFLQKQLTQPETH K L R Q K Q 0 1 0 0 0 1 0 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 8 1 987.58655 H0Y5J4;Q9UJU6;B4DDD6 H0Y5J4 210 217 DBNL Drebrin-like protein yes no 2 0.00702 110.38 By MS/MS By MS/MS 1 1 37174000 18376000 18797000 3534 1027 3913 8860;8861 8154;8155 8155 1908 2 LRSVSSYGNIR RDSPCTPRLRSVSSYG VSSYGNIRAVATARSL R L R I R A 0 2 1 0 0 0 0 1 0 1 1 0 0 0 0 3 0 0 1 1 0 0 11 1 1250.6731 Q8N122 Q8N122 717 727 RPTOR Regulatory-associated protein of mTOR yes yes 2 4.0183E-05 123.28 By MS/MS 1 7766900 7766900 0 3535 2296 3914 8862 8156 8156 4607;4608;4609 1 LRVQSPEPPAPER AERRHQERLRVQSPEP PEPPAPERALSPAELR R L R E R A 1 2 0 0 0 1 2 0 0 0 1 0 0 0 4 1 0 0 0 1 0 0 13 1 1474.7892 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1390 1402 SCRIB Protein scribble homolog yes no 2 0.0018942 93.237 By MS/MS By MS/MS 1 1 22151000 12511000 9640000 3536 322 3915 8863;8864 8157;8158 8158 598 2 LSAEAHNVMKPPYNVGILK L S L K 2 0 2 0 0 0 1 1 1 1 2 2 1 0 2 1 0 0 1 2 0 0 19 1 2080.1139 REV__Q16526 yes yes 2 0.026938 40.725 By matching By MS/MS 1 1 15239000 6621800 8616800 + 3537 2996 3916 8865;8866 8159 8159 7975 1 LSAMLVPVTPEVKPK EPKRRSARLSAMLVPV VTPEVKPKRTSSSRKM R L S P K R 1 0 0 0 0 0 1 0 0 0 2 2 1 0 3 1 1 0 0 3 0 0 15 1 1607.9321 Q5JSK7;Q5JSK8;Q5JSL0;Q5JSK6;P82970 Q5JSK7 23 37 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes no 2;3 7.533E-10 126.07 By MS/MS By MS/MS 4 4 37272000 20584000 16688000 3538 1817 3917;3918 8867;8868;8869;8870;8871;8872;8873;8874 8160;8161;8162;8163;8164;8165;8166;8167;8168 8165 234 6757 8 LSASSEDISER GKGLCATKLSASSEDI SSEDISERLASISVGP K L S E R L 1 1 0 1 0 0 2 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0 11 0 1192.5572 Q13233 Q13233 920 930 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 yes yes 2 0.001661 95.273 By MS/MS By MS/MS 1 1 9317300 4892200 4425100 3539 1905 3919 8875;8876 8169;8170 8169 3642;3643 1 LSASTASELSPK LPASPRARLSASTASE TASELSPKSKARPSSP R L S P K S 2 0 0 0 0 0 1 0 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1189.619 Q3KQU3;H0YF21 Q3KQU3 451 462 MAP7D1 MAP7 domain-containing protein 1 yes no 2 6.0673E-14 158.81 By MS/MS By MS/MS 1 1 61863000 36185000 25677000 3540 2036 3920 8877;8878 8171;8172 8171 3979;3980 2 LSASTASELSPKSK LPASPRARLSASTASE SELSPKSKARPSSPST R L S S K A 2 0 0 0 0 0 1 0 0 0 2 2 0 0 1 5 1 0 0 0 0 0 14 1 1404.746 Q3KQU3;H0YF21 Q3KQU3 451 464 MAP7D1 MAP7 domain-containing protein 1 yes no 2 3.7195E-14 143.64 By MS/MS By MS/MS 1 1 9139600 4512500 4627100 3541 2036 3921 8879;8880 8173;8174 8174 3979;3980 2 LSAVEAIANAISVVSSNGPGNR ERNTFAERLSAVEAIA SSNGPGNRAGSSSSRS R L S N R A 4 1 3 0 0 0 1 2 0 2 1 0 0 0 1 4 0 0 0 3 0 0 22 0 2125.1127 E7EMW7;O95071;H0YBB4;H0YAV7 E7EMW7 950 971 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.031293 49.31 By MS/MS 1 0 0 0 3542 707 3922 8881 8175 8175 1 LSCIGSPIVSPR DCIKDYERLSCIGSPI GSPIVSPRIVQLETES R L S P R I 0 1 0 0 1 0 0 1 0 2 1 0 0 0 2 3 0 0 0 1 0 0 12 0 1284.686 Q9UKT4 Q9UKT4 93 104 FBXO5 F-box only protein 5 yes yes 2 0.0040987 77.42 By MS/MS 1 5225100 5225100 0 3543 2836 3923 8882 8176 8176 5837 1 LSDDFDSPVKGPLCK PLKKREIKLSDDFDSP PVKGPLCKSVTPTKEF K L S C K S 0 0 0 3 1 0 0 1 0 0 2 2 0 1 2 2 0 0 0 1 0 0 15 1 1676.808 Q96T23;H0YER1;H0YCN2 Q96T23 391 405 RSF1 Remodeling and spacing factor 1 yes no 2;3 0.00070065 79.639 By MS/MS By MS/MS 2 2 28340000 16659000 11681000 3544 2544 3924 8883;8884;8885;8886 8177;8178;8179 8177 5135;5136 2 LSDGVAVLK KLNERLAKLSDGVAVL SDGVAVLKVGGTSDVE K L S L K V 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 9 0 900.52803 P10809 P10809 397 405 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0050649 110.12 By MS/MS By MS/MS 1 1 8230000 4225900 4004200 3545 1557 3925 8887;8888 8180;8181 8181 2 LSDPPTSPSSPSQMMPHVQTHF LQLANSAKLSDPPTSP MPHVQTHF________ K L S H F - 0 0 0 1 0 2 0 0 2 0 1 0 2 1 5 5 2 0 0 1 0 0 22 0 2407.0937 Q13496 Q13496 582 603 MTM1 Myotubularin yes yes 3 0.010191 56.719 By MS/MS By MS/MS 1 1 10803000 5896800 4906300 3546 1919 3926 8889;8890 8182;8183 8182 3700;3701;6798 2 LSDSPSMKKESELPR SDQPILLRLSDSPSMK KKESELPRRVNSASSS R L S P R R 0 1 0 1 0 0 2 0 0 0 2 2 1 0 2 4 0 0 0 0 0 0 15 2 1702.856 F6VRR5;Q9BY77 F6VRR5 382 396 POLDIP3 Polymerase delta-interacting protein 3 yes no 3 0.0019499 69.261 By MS/MS 1 6563200 0 6563200 3547 908 3927 8891 8184 8184 1626 1 LSDSYSNTLPVR SPPQSQSKLSDSYSNT YSNTLPVRKSVTPKNS K L S V R K 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 3 1 0 1 1 0 0 12 0 1350.6779 I3L0Y9;B4DWA1;I3L4C2;Q9UQB8;I3L3C6 I3L0Y9 90 101 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 no no 2 4.6061E-09 139.38 By MS/MS By MS/MS 1 1 4237100 2393600 1843500 3548 495;1212 3928 8892;8893 8185;8186 8185 7293 2 LSEAACEDEDSASEGLGELFLDGLSTENPHGAR AIKARNIRLSEAACED TENPHGARLSLDGQGR R L S A R L 4 1 1 3 1 0 6 4 1 0 5 0 0 1 1 4 1 0 0 0 0 0 33 0 3475.5322 O95801 O95801 233 265 TTC4 Tetratricopeptide repeat protein 4 yes yes 3 0.00036967 55.406 By MS/MS 1 9437600 9437600 0 3549 1501 3929 8894 8187 8187 2783 1 LSEAVWQPEEHYSSSPEK LDEKVDTKLSEAVWQP HYSSSPEKILSPFSQK K L S E K I 1 0 0 0 0 1 4 0 1 0 1 1 0 0 2 4 0 1 1 1 0 0 18 0 2101.9593 F5H269;Q9Y485 F5H269 904 921 DMXL1 DmX-like protein 1 yes no 2;3 0.00061844 72.523 By matching By MS/MS 2 2 9401700 4131300 5270300 3550 880 3930 8895;8896;8897;8898 8188;8189 8188 1583;1584;1585 2 LSEEAECPNPSTPSK REQEMFFKLSEEAECP PNPSTPSKAAKFFPYS K L S S K A 1 0 1 0 1 0 3 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 15 0 1644.7301 O94804 O94804 941 955 STK10 Serine/threonine-protein kinase 10 yes yes 2 4.1862E-165 242.45 By MS/MS By MS/MS 1 1 45608000 23918000 21690000 3551 1462 3931 8899;8900 8190;8191 8191 2705;6644 2 LSEGSQPAEEEEDQETPSR VRQARAAKLSEGSQPA EDQETPSRNLRVRADR K L S S R N 1 1 0 1 0 2 6 1 0 0 1 0 0 0 2 3 1 0 0 0 0 0 19 0 2116.9033 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 181 199 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 1.0204E-06 102.89 By MS/MS By matching 1 1 9405600 4346400 5059200 3552 725 3932 8901;8902 8192 8192 1289;1290 1 LSENVIDR ITVVKGIRLSENVIDR LSENVIDRMKESSPSG R L S D R M 0 1 1 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 1 0 0 8 0 944.49271 C9JRZ6;F8WAR4;Q9NX63;F8WD73 C9JRZ6 28 35 CHCHD3 MICOS complex subunit MIC19 yes no 2 0.012377 98.629 By MS/MS By MS/MS 1 1 3087300 1470900 1616400 3553 607 3933 8903;8904 8193;8194 8194 2 LSEPVPQTNAHESK RCNEFEMRLSEPVPQT QTNAHESKEWYHASLT R L S S K E 1 0 1 0 0 1 2 0 1 0 1 1 0 0 2 2 1 0 0 1 0 0 14 0 1535.758 P19174 P19174 653 666 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 2 0.012496 88.552 By matching By MS/MS 1 1 22477000 12343000 10133000 3554 1603 3934 8905;8906 8195 8195 2959 1 LSESPASLPSCPPVETALINQR PTEIAGQKLSESPASL ETALINQRDLADALLD K L S Q R D 2 1 1 0 1 1 2 0 0 1 3 0 0 0 4 4 1 0 0 1 0 0 22 0 2365.1948 Q2TAZ0 Q2TAZ0 1260 1281 ATG2A Autophagy-related protein 2 homolog A yes yes 3 0.017983 43.476 By MS/MS By matching 1 1 4885400 2509300 2376100 3555 2032 3935 8907;8908 8196 8196 3969 1 LSESQLSFR AELSDYRRLSESQLSF SESQLSFRRSPTKSSL R L S F R R 0 1 0 0 0 1 1 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 9 0 1065.5455 Q96PK6 Q96PK6 617 625 RBM14 RNA-binding protein 14 yes yes 2 0.0024179 114.89 By MS/MS By matching 1 1 2375000 1061700 1313300 3556 2524 3936 8909;8910 8197 8197 5097 1 LSESQLSFRRSPTK AELSDYRRLSESQLSF SFRRSPTKSSLDYRRL R L S T K S 0 2 0 0 0 1 1 0 0 0 2 1 0 1 1 4 1 0 0 0 0 0 14 2 1634.874 Q96PK6 Q96PK6 617 630 RBM14 RNA-binding protein 14 yes yes 3 0.027169 50.222 By matching By MS/MS 1 1 24684000 12307000 12377000 3557 2524 3937 8911;8912 8198 8198 5097;5098 1 LSEVIYEPFQLLSK KIEDTKRRLSEVIYEP EPFQLLSKIIGEESGS R L S S K I 0 0 0 0 0 1 2 0 0 1 3 1 0 1 1 2 0 0 1 1 0 0 14 0 1664.9025 A0A087WVA8;Q8IWB9 A0A087WVA8 294 307 TEX2 Testis-expressed sequence 2 protein yes no 2 0.00047147 93.839 By MS/MS By MS/MS 1 1 3296700 2343900 952780 3558 59 3938 8913;8914 8199;8200 8199 106;7159 2 LSFASETPLEKEPHSPADQPEQQAESTLTSAETR ACTSSFLRLSFASETP TLTSAETRGSKKKKKL R L S T R G 4 1 0 1 0 3 6 0 1 0 3 1 0 1 4 5 4 0 0 0 0 0 34 1 3710.7548 Q9H2Y7;A0A0C4DGM5 Q9H2Y7 1314 1347 ZNF106 Zinc finger protein 106 yes no 4 0.00029737 54.867 By matching By MS/MS 1 1 29643000 11753000 17889000 3559 2649 3939 8915;8916 8201 8201 5402 1 LSFDSSPTSSTDGHSSYGLDSGFCTISR YDSLVVGKLSFDSSPT SGFCTISRLPRSEKPH K L S S R L 0 1 0 3 1 0 0 3 1 1 2 0 0 2 1 9 3 0 1 0 0 0 28 0 2967.2829 Q00587 Q00587 138 165 CDC42EP1 Cdc42 effector protein 1 yes yes 3 0.00085893 56.292 By MS/MS By matching 1 1 32392000 20170000 12222000 3560 1825 3940 8917;8918 8202 8202 3413;3414 1 LSGFSFK FSFKKSFKLSGFSFKK KLSGFSFKKNKKEAGE K L S F K K 0 0 0 0 0 0 0 1 0 0 1 1 0 2 0 2 0 0 0 0 0 0 7 0 784.41194 P29966 P29966 166 172 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.022147 85.676 By MS/MS By MS/MS 1 1 147930000 86718000 61215000 3561 1648 3941 8919;8920 8203;8204 8204 3050;3051 2 LSGFSFKK FSFKKSFKLSGFSFKK LSGFSFKKNKKEAGEG K L S K K N 0 0 0 0 0 0 0 1 0 0 1 2 0 2 0 2 0 0 0 0 0 0 8 1 912.5069 P29966 P29966 166 173 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.027309 83.862 By MS/MS By MS/MS 1 1 1283000000 800330000 482680000 3562 1648 3942 8921;8922 8205;8206 8206 3050;3051 2 LSGINEIPRPFSPPVTSNTSPPPAAPLAR RPKLTSGKLSGINEIP PPAAPLARAESSSSIS K L S A R A 3 2 2 0 0 0 1 1 0 2 2 0 0 1 8 4 2 0 0 1 0 0 29 1 2982.5927 Q0JRZ9 Q0JRZ9 477 505 FCHO2 F-BAR domain only protein 2 yes yes 3 0.0094977 45.639 By MS/MS By matching 1 1 8806800 7050700 1756100 3563 1872 3943 8923;8924 8207 8207 3546;6775 1 LSGLSFKR FSFKKPFKLSGLSFKR LSGLSFKRNRKEGGGD K L S K R N 0 1 0 0 0 0 0 1 0 0 2 1 0 1 0 2 0 0 0 0 0 0 8 1 906.5287 P49006 P49006 100 107 MARCKSL1 MARCKS-related protein yes yes 2 0.016415 96.342 By MS/MS By MS/MS 1 1 1514300000 936020000 578260000 3564 1721 3944 8925;8926 8208;8209;8210 8209 3222 3 LSGSSESPSGPK DLTSPHSRLSGSSESP SESPSGPKLGNSHINS R L S P K L 0 0 0 0 0 0 1 2 0 0 1 1 0 0 2 5 0 0 0 0 0 0 12 0 1131.5408 E5RIQ7;A6NCB9;F8WB53;Q99502 E5RIQ7 13 24 EYA1 Eyes absent homolog;Eyes absent homolog 1 yes no 2 0.02086 71.268 By MS/MS 1 0 0 0 3565 408 3945 8927 8211 8211 776 1 LSKIPSTPK NSDDSRNKLSKIPSTP SKIPSTPKLIPKVTKT K L S P K L 0 0 0 0 0 0 0 0 0 1 1 2 0 0 2 2 1 0 0 0 0 0 9 1 969.58588 B5MBZ0;Q9HC35 B5MBZ0 195 203 EML4 Echinoderm microtubule-associated protein-like 4 yes no 2 0.0063814 103.46 By matching By MS/MS 1 1 9106200 4451400 4654900 3566 501 3946 8928;8929 8212 8212 942;6355 1 LSKIPSTPKLIPK NSDDSRNKLSKIPSTP STPKLIPKVTKTADKH K L S P K V 0 0 0 0 0 0 0 0 0 2 2 3 0 0 3 2 1 0 0 0 0 0 13 2 1420.9017 B5MBZ0;Q9HC35 B5MBZ0 195 207 EML4 Echinoderm microtubule-associated protein-like 4 yes no 3 0.024831 53.395 By MS/MS 1 2228100 2228100 0 3567 501 3947 8930 8213 8213 942;6355 1 LSKSSATLWNSPSR VDSIINKRLSKSSATL TLWNSPSRNRSLQLSA R L S S R N 1 1 1 0 0 0 0 0 0 0 2 1 0 0 1 5 1 1 0 0 0 0 14 1 1532.7947 Q3KQU3;C9JIR3 Q3KQU3 270 283 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.0054074 70.41 By MS/MS By matching 1 1 9317100 4501800 4815200 3568 2036 3948 8931;8932 8214 8214 3983 1 LSLEGDHSTPPSAYGSVK TVHEILCKLSLEGDHS PSAYGSVKAYTNFDAE K L S V K A 1 0 0 1 0 0 1 2 1 0 2 1 0 0 2 4 1 0 1 1 0 0 18 0 1843.8952 H0YMD9;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;H0YNB8;H0YKN4;A6NMY6 H0YMD9 11 28 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 2;3 7.9095E-20 133.23 By MS/MS By MS/MS 2 2 42430000 19217000 23213000 3569 1087 3949 8933;8934;8935;8936 8215;8216;8217;8218;8219 8219 2003;7452 5 LSLFSDGDSSESEDTLSSSER SSTVTSPRLSLFSDGD DTLSSSERSKGSGSRP R L S E R S 0 1 0 3 0 0 3 1 0 0 3 0 0 1 0 8 1 0 0 0 0 0 21 0 2246.9663 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63 M0QZ79 74 94 VRK3 Inactive serine/threonine-protein kinase VRK3 yes no 2 1.0581E-09 102.52 By MS/MS By MS/MS 2 2 52291000 30263000 22029000 3570 1295 3950;3951 8937;8938;8939;8940 8220;8221;8222;8223 8221 2333;2334;2335;2336 4 LSLGSDDEADLVK LTLNLDQRLSLGSDDE DDEADLVKELQSMCSS R L S V K E 1 0 0 3 0 0 1 1 0 0 3 1 0 0 0 2 0 0 0 1 0 0 13 0 1360.6722 H0Y448;Q8WZ74 H0Y448 1008 1020 CTTNBP2 Cortactin-binding protein 2 yes no 2 0.012034 80.746 By MS/MS 1 0 0 0 3571 1014 3952 8941 8224 8224 1872 1 LSLLSSTSK VFCSVPGRLSLLSSTS SLLSSTSKYKVTVAEV R L S S K Y 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 4 1 0 0 0 0 0 9 0 934.53351 C9JXZ2;H7C5E5;C1K3N0;Q96SH1;P05549;Q6VUC0;Q92754;Q7Z6R9;Q92481 C9JXZ2 75 83 TFAP2A;TFAP2E;TFAP2C;TFAP2D;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2 gamma;Transcription factor AP-2-delta;Transcription factor AP-2-beta yes no 2 0.0021948 116.55 By MS/MS By MS/MS 1 1 2708800 1282400 1426400 3572 539 3953 8942;8943 8225;8226 8225 987;988 2 LSLPGLLSQVSPR ETEGGSRRLSLPGLLS LLSQVSPRLLRKAARV R L S P R L 0 1 0 0 0 1 0 1 0 0 4 0 0 0 2 3 0 0 0 1 0 0 13 0 1365.798 Q96Q42 Q96Q42 482 494 ALS2 Alsin yes yes 2 0.00051911 109.1 By MS/MS By MS/MS 1 1 7521500 4496300 3025200 3573 2527 3954 8944;8945 8227;8228 8228 5102;5103 2 LSLSPLR SPAEGSERLSLSPLRG RLSLSPLRGGEAGPDA R L S L R G 0 1 0 0 0 0 0 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 7 0 784.48069 Q66K74 Q66K74 654 660 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 2 0.010815 99.136 By MS/MS By MS/MS 1 1 25122000 14540000 10582000 3574 2131 3955 8946;8947 8229;8230 8229 4241 2 LSLVIRSPSLLQSGAK ALARKKARLSLVIRSP SLLQSGAKKKAQVRKA R L S A K K 1 1 0 0 0 1 0 1 0 1 4 1 0 0 1 4 0 0 0 1 0 0 16 1 1667.9934 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 1302 1317 MYBBP1A Myb-binding protein 1A yes no 3 0.00091847 72.615 By MS/MS By MS/MS 1 1 6702700 4736800 1965900 3575 2570 3956 8948;8949 8231;8232 8231 5189;5190 2 LSMEDSKSPPPK GEFIQQLKLSMEDSKS DSKSPPPKATEEKKSL K L S P K A 0 0 0 1 0 0 1 0 0 0 1 2 1 0 3 3 0 0 0 0 0 0 12 1 1314.649 Q9NQG5 Q9NQG5 127 138 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 3 0.0014719 84.173 By MS/MS By MS/MS 1 1 6984500 3710400 3274100 3576 2708 3957 8950;8951 8233;8234 8234 5522 2 LSNGLARLSSPVLHR DAGAIGQRLSNGLARL LSSPVLHRLRLREDEN R L S H R L 1 2 1 0 0 0 0 1 1 0 4 0 0 0 1 3 0 0 0 1 0 0 15 1 1618.9267 Q16643;D6RCR4;D6R9W4 Q16643 133 147 DBN1 Drebrin yes no 3 0.0016158 67.019 By matching By MS/MS 1 1 5060300 2103700 2956600 3577 2019 3958 8952;8953 8235 8235 3944 1 LSNGSFSAPSLTNSR PKTGLSARLSNGSFSA APSLTNSRGSVHTVSF R L S S R G 1 1 2 0 0 0 0 1 0 0 2 0 0 1 1 5 1 0 0 0 0 0 15 0 1536.7532 O94806 O94806 40 54 PRKD3 Serine/threonine-protein kinase D3 yes yes 2 0.002397 72.446 By MS/MS By MS/MS 1 1 8143500 4218600 3924900 3578 1463 3959 8954;8955 8236;8237 8237 2707;2708 2 LSNVSLTGVSTIR CSGVRRRRLSNVSLTG LTGVSTIRTSSAELST R L S I R T 0 1 1 0 0 0 0 1 0 1 2 0 0 0 0 3 2 0 0 2 0 0 13 0 1345.7565 Q15139;F8WBA3 Q15139 204 216 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 2 0.00073595 130.47 By MS/MS By MS/MS 1 1 22098000 22098000 0 3579 1978 3960 8956;8957 8238;8239 8238 3852;3853 2 LSPATPTSEGPK LAEASLLKLSPATPTS TPTSEGPKVVSVQLGD K L S P K V 1 0 0 0 0 0 1 1 0 0 1 1 0 0 3 2 2 0 0 0 0 0 12 0 1183.6085 Q8N1G0;F8WCX2 Q8N1G0 373 384 ZNF687 Zinc finger protein 687 yes no 2 0.026655 73.415 By MS/MS By matching 1 1 33444000 17010000 16434000 3580 2298 3961 8958;8959 8240 8240 1 LSPSWNPK APVETEPKLSPSWNPK LSPSWNPKIIYEPHPQ K L S P K I 0 0 1 0 0 0 0 0 0 0 1 1 0 0 2 2 0 1 0 0 0 0 8 0 927.48142 Q96BY7 Q96BY7 254 261 ATG2B Autophagy-related protein 2 homolog B yes yes 2 0.018571 74.165 By matching By MS/MS 1 1 5714700 2861400 2853300 3581 2463 3962 8960;8961 8241 8241 4960;4961 1 LSPYPSSPMR LLTPLISKLSPYPSSP PYPSSPMRRPQSADAY K L S M R R 0 1 0 0 0 0 0 0 0 0 1 0 1 0 3 3 0 0 1 0 0 0 10 0 1133.5539 A0A0A0MRE6;O94967 A0A0A0MRE6 263 272 WDR47 WD repeat-containing protein 47 yes no 2 0.0087532 72.731 By MS/MS By MS/MS 1 1 4757400 2390200 2367200 3582 181 3963 8962;8963 8242;8243 8242 322;323 2 LSQKAPSLEDGSDAFMSPQDVR HVTTMGQRLSQKAPSL FMSPQDVRGTSENLPE R L S V R G 2 1 0 3 0 2 1 1 0 0 2 1 1 1 2 4 0 0 0 1 0 0 22 1 2377.122 E9PJ68;O75387 E9PJ68 230 251 SLC43A1 Large neutral amino acids transporter small subunit 3 yes no 3 0.010529 47.392 By MS/MS 1 2059600 2059600 0 3583 809 3964 8964 8244 8244 1451;1452 1 LSQMQSPIPLTETR FGAQTSSRLSQMQSPI PIPLTETRTPPGPCCS R L S T R T 0 1 0 0 0 2 1 0 0 1 2 0 1 0 2 2 2 0 0 0 0 0 14 0 1599.829 H3BSW6;Q2VPK5 H3BSW6 485 498 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 yes no 2 0.00081022 95.751 By MS/MS By MS/MS 2 2 50268000 24123000 26145000 3584 1141 3965;3966 8965;8966;8967;8968 8245;8246;8247;8248 8247 134 2082 4 LSQSDEDVIR SSLKKKKRLSQSDEDV QSDEDVIRLIGQHLNG R L S I R L 0 1 0 2 0 1 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 10 0 1160.5673 H0Y917;Q9H7D7 H0Y917 112 121 WDR26 WD repeat-containing protein 26 yes no 2 0.0025156 87.719 By MS/MS By MS/MS 1 1 4246000 1916800 2329200 3585 1044 3967 8969;8970 8249;8250 8249 1939;1940 2 LSQSGHMLLNLSR LEMMACDRLSQSGHML HMLLNLSRGKQDFLKE R L S S R G 0 1 1 0 0 1 0 1 1 0 4 0 1 0 0 3 0 0 0 0 0 0 13 0 1454.7664 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;P0DJD0;P0DJD1 P49792 351 363 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 yes no 3 0.021931 49.448 By MS/MS 1 1841700 1841700 0 3586 1730 3968 8971 8251 8251 1 LSQSSQDSSPVR RVTRSSARLSQSSQDS SQDSSPVRNLQSFGTE R L S V R N 0 1 0 1 0 2 0 0 0 0 1 0 0 0 1 5 0 0 0 1 0 0 12 0 1289.6212 O95251 O95251 49 60 KAT7 Histone acetyltransferase KAT7 yes yes 2 0.0068721 71.976 By MS/MS By MS/MS 1 1 5930100 3076200 2853900 3587 1482 3969 8972;8973 8252;8253 8253 2740;2741;2742 2 LSQSSQDSSPVRNLQSFGTEEPAYSTR RVTRSSARLSQSSQDS EEPAYSTRRVTRSQQQ R L S T R R 1 2 1 1 0 3 2 1 0 0 2 0 0 1 2 7 2 0 1 1 0 0 27 1 2970.3955 O95251 O95251 49 75 KAT7 Histone acetyltransferase KAT7 yes yes 3 0.010241 45.511 By matching By MS/MS 1 1 35087000 15095000 19993000 3588 1482 3970 8974;8975 8254 8254 2740;2741;2742 1 LSQSVYHGASSEGSLSPDTR KELRPDNRLSQSVYHG GSLSPDTRSHASDVTD R L S T R S 1 1 0 1 0 1 1 2 1 0 2 0 0 0 1 6 1 0 1 1 0 0 20 0 2076.9712 Q9UPY6 Q9UPY6 220 239 WASF3 Wiskott-Aldrich syndrome protein family member 3 yes yes 3 0.017772 45.069 By MS/MS 1 2649000 2649000 0 3589 2875 3971 8976 8255;8256 8255 5940 2 LSSEDEEEDEAEDDQSEASGKK HPSNMMSKLSSEDEEE QSEASGKKSVKG____ K L S K K S 2 0 0 4 0 1 7 1 0 0 1 2 0 0 0 4 0 0 0 0 0 0 22 1 2425.9729 G3V4G1;Q8NEJ9 G3V4G1 116 137 NGDN Neuroguidin yes no 3 1.3482E-11 109.42 By MS/MS By MS/MS 1 1 35276000 19570000 15706000 3590 973 3972 8977;8978 8257;8258 8258 1773 2 LSSESHHGGSPIHWVLPAGMSAK GKFQGFARLSSESHHG LPAGMSAKMLGGVFKI R L S A K M 2 0 0 0 0 0 1 3 3 1 2 1 1 0 2 5 0 1 0 1 0 0 23 0 2384.1695 J3QR07;Q96MU7 J3QR07 415 437 YTHDC1 YTH domain-containing protein 1 yes no 4 1.7303E-06 81.904 By MS/MS By MS/MS 1 1 21005000 10524000 10481000 3591 1254 3973 8979;8980 8259;8260 8259 2270;2271 2 LSSFSCGQASATPFTDIK RGKPVRLRLSSFSCGQ ATPFTDIKSNNWSLED R L S I K S 2 0 0 1 1 1 0 1 0 1 1 1 0 2 1 4 2 0 0 0 0 0 18 0 1915.8986 Q14680 Q14680 334 351 MELK Maternal embryonic leucine zipper kinase yes yes 2 6.7849E-09 113.37 By MS/MS By MS/MS 1 1 18506000 10394000 8112700 3592 1954 3974 8981;8982 8261;8262 8261 3787;3788 2 LSSLRASTSKSESSQK EQIAKRRRLSSLRAST SKSESSQK________ R L S Q K - 1 1 0 0 0 1 1 0 0 0 2 2 0 0 0 7 1 0 0 0 0 0 16 2 1694.8799 P62753;A2A3R5 P62753 234 249 RPS6 40S ribosomal protein S6 yes no 2 0.00099906 73.735 By MS/MS By MS/MS 2 2 49719000 24553000 25166000 3593 1800 3975;3976 8983;8984;8985;8986 8263;8264;8265;8266 8263 3371;3372;3373;3374;3375;3376;6747 4 LSSLSSLGDSAPER RLPQSIDRLSSLSSLG LGDSAPERKSPSHHRQ R L S E R K 1 1 0 1 0 0 1 1 0 0 3 0 0 0 1 5 0 0 0 0 0 0 14 0 1417.7049 O15085 O15085 12 25 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 2 0.0019103 88.282 By MS/MS By MS/MS 1 1 4145500 2768000 1377600 3594 1357 3977 8987;8988 8267;8268 8267 2474 1 LSSPISKR GKRGHHNRLSSPISKR LSSPISKRCRTSILST R L S K R C 0 1 0 0 0 0 0 0 0 1 1 1 0 0 1 3 0 0 0 0 0 0 8 1 886.52362 Q99728 Q99728 328 335 BARD1 BRCA1-associated RING domain protein 1 yes yes 2 0.019974 91.265 By MS/MS By MS/MS 1 1 5567100 2879900 2687200 3595 2557 3978 8989;8990 8269;8270 8270 5169 2 LSSPVKRPR EAFTFNIKLSSPVKRP SSPVKRPRKEPVDEDL K L S P R K 0 2 0 0 0 0 0 0 0 0 1 1 0 0 2 2 0 0 0 1 0 0 9 2 1038.6298 P26358 P26358 952 960 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 3 0.017023 63.419 By MS/MS By MS/MS 1 1 18399000 11442000 6956900 3596 1634 3979 8991;8992 8271;8272;8273 8272 3022 3 LSSPVLHR RLSNGLARLSSPVLHR LSSPVLHRLRLREDEN R L S H R L 0 1 0 0 0 0 0 0 1 0 2 0 0 0 1 2 0 0 0 1 0 0 8 0 907.52395 Q16643;D6RCR4;D6R9W4 Q16643 140 147 DBN1 Drebrin yes no 2 0.0092133 90.906 By MS/MS By MS/MS 1 1 1174700000 566230000 608490000 3597 2019 3980 8993;8994 8274;8275 8275 3944 2 LSSPVLHRLR RLSNGLARLSSPVLHR SPVLHRLRLREDENAE R L S L R L 0 2 0 0 0 0 0 0 1 0 3 0 0 0 1 2 0 0 0 1 0 0 10 1 1176.7091 Q16643;D6RCR4;D6R9W4 Q16643 140 149 DBN1 Drebrin yes no 2;3 0.0012958 85.731 By MS/MS By MS/MS 1 2 42924000 8317600 34606000 3598 2019 3981 8995;8996;8997 8276;8277 8277 3944 2 LSSQDVLR FPREYFRRLSSQDVLR LSSQDVLRCQSSSKRK R L S L R C 0 1 0 1 0 1 0 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 8 0 916.49779 Q92794;C9K0F9 Q92794 1088 1095 KAT6A Histone acetyltransferase KAT6A;Histone acetyltransferase yes no 2 0.015824 77.662 By MS/MS By matching 1 1 3140700 1928200 1212500 3599 2438 3982 8998;8999 8278 8278 4905;4906 1 LSSQISAGEEK GWNEKSVKLSSQISAG QISAGEEKWNSVSPAS K L S E K W 1 0 0 0 0 1 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 11 0 1147.5721 E5RJU9;Q86UE4;H0YB56 E5RJU9 270 280 MTDH Protein LYRIC yes no 2 4.5452E-05 118.76 By MS/MS By MS/MS 1 1 189410000 106820000 82592000 3600 701 3983 9000;9001 8279;8280;8281 8279 1240 3 LSSQISAGEEKWNSVSPASAGKR GWNEKSVKLSSQISAG SPASAGKRKTEPSAWS K L S K R K 3 1 1 0 0 1 2 2 0 1 1 2 0 0 1 6 0 1 0 1 0 0 23 2 2388.2034 E5RJU9;Q86UE4;H0YB56 E5RJU9 270 292 MTDH Protein LYRIC yes no 3;4 3.2907E-06 83.065 By MS/MS 2 23950000 0 23950000 3601 701 3984 9002;9003 8282;8283 8283 1240 2 LSSRHTMAR GKPVVPTRLSSRHTMA SSRHTMARLSRSSEPS R L S A R L 1 2 0 0 0 0 0 0 1 0 1 0 1 0 0 2 1 0 0 0 0 0 9 1 1057.5451 Q5T925 Q5T925 82 90 SORBS1 yes yes 2 0.010706 60.064 By MS/MS By matching 1 1 11151000 6145900 5005500 3602 2103 3985 9004;9005 8284 8284 282 1 LSSSSATLLNSPDR VDPVISKRLSSSSATL TLLNSPDRARRLQLSP R L S D R A 1 1 1 1 0 0 0 0 0 0 3 0 0 0 1 5 1 0 0 0 0 0 14 0 1446.7314 A0A087WZ40;Q14244 A0A087WZ40 221 234 MAP7 Ensconsin yes no 2 0.00041818 107.74 By MS/MS By matching 1 1 4092600 2279000 1813600 3603 108 3986 9006;9007 8285 8285 200 1 LSSSWESLQPEPSHPY SPVSLWSRLSSSWESL QPEPSHPY________ R L S P Y - 0 0 0 0 0 1 2 0 1 0 2 0 0 0 3 5 0 1 1 0 0 0 16 0 1842.8424 P11277 P11277 2122 2137 SPTB Spectrin beta chain, erythrocytic yes yes 2 0.030448 49.5 By matching By MS/MS 1 1 6880400 3651700 3228600 3604 1563 3987 9008;9009 8286 8286 1 LSSTDDGYIDLQFK SSKVKYSRLSSTDDGY GYIDLQFKKTPPKIPY R L S F K K 0 0 0 3 0 1 0 1 0 1 2 1 0 1 0 2 1 0 1 0 0 0 14 0 1600.7621 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 22 35 TMEM230 Transmembrane protein 230 yes no 2 2.5015E-06 120.29 By MS/MS By matching 1 1 61623000 38431000 23193000 3605 32 3988 9010;9011 8287;8288 8287 61 2 LSSTDDGYIDLQFKK SSKVKYSRLSSTDDGY YIDLQFKKTPPKIPYK R L S K K T 0 0 0 3 0 1 0 1 0 1 2 2 0 1 0 2 1 0 1 0 0 0 15 1 1728.857 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 22 36 TMEM230 Transmembrane protein 230 yes no 2;3 7.6608E-20 139.77 By MS/MS By MS/MS 2 2 29899000 18609000 11289000 3606 32 3989 9012;9013;9014;9015 8289;8290;8291 8289 61 2 LSSTPPLSALGR TGLTKRPKLSSTPPLS PPLSALGRLAEAAVAE K L S G R L 1 1 0 0 0 0 0 1 0 0 3 0 0 0 2 3 1 0 0 0 0 0 12 0 1197.6717 Q8N201 Q8N201 80 91 INTS1 Integrator complex subunit 1 yes yes 2 0.0061013 73.273 By MS/MS By matching 1 1 7677900 4195500 3482300 3607 2299 3990 9016;9017 8292 8292 4623 1 LSSWDQAETPGHTPSLR TPGATPKKLSSWDQAE PGHTPSLRWDETPGRA K L S L R W 1 1 0 1 0 1 1 1 1 0 2 0 0 0 2 3 2 1 0 0 0 0 17 0 1880.9017 O75533 O75533 215 231 SF3B1 Splicing factor 3B subunit 1 yes yes 3 7.9863E-06 107.78 By MS/MS By MS/MS 2 2 25149000 13055000 12094000 3608 1443 3991 9018;9019;9020;9021 8293;8294;8295 8293 6632;6633 3 LSSYTECYK LIPIAKKRLSSYTECY SSYTECYKWSSSPENA R L S Y K W 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 2 1 0 2 0 0 0 9 0 1149.5012 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 447 455 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.007368 79.201 By MS/MS By MS/MS 1 1 20787000 12465000 8321900 3609 195 3992 9022;9023 8296;8297 8297 351 2 LSTASVIQAR GRPPRSQRLSTASVIQ TASVIQARYQGLVDGR R L S A R Y 2 1 0 0 0 1 0 0 0 1 1 0 0 0 0 2 1 0 0 1 0 0 10 0 1044.5928 Q96JB3 Q96JB3 165 174 HIC2 Hypermethylated in cancer 2 protein yes yes 2 0.0095498 98.754 By MS/MS By MS/MS 1 1 1490000 0 1490000 3610 2505 3993 9024;9025 8298;8299 8298 5042;5043;7005 2 LSTHSPFR RPSEWDKRLSTHSPFR LSTHSPFRTLNINGQI R L S F R T 0 1 0 0 0 0 0 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 8 0 943.48756 Q4VB86;P11171;A0A1B0GWG0 Q4VB86 466 473 EPB41 Protein 4.1 yes no 2 0.0092468 90.827 By MS/MS By MS/MS 1 1 8917300 4854700 4062500 3611 1561 3994 9026;9027 8300;8301 8301 2863;6667 2 LSTTPSPTSSLHEDGVEDFRR PAQSPEDRLSTTPSPT DGVEDFRR________ R L S R R - 0 2 0 2 0 0 2 1 1 0 2 0 0 1 2 4 3 0 0 1 0 0 21 1 2330.1139 C9J919;C9JNL1;O94842 C9J919 150 170 TOX4 TOX high mobility group box family member 4 yes no 3 0.0033755 51.535 By matching By MS/MS 1 1 14323000 7365100 6957900 3612 572 3995 9028;9029 8302 8302 1050 1 LSVPTSDEEDEVPAPKPR ELMERLKKLSVPTSDE EVPAPKPRGGKKTKGG K L S P R G 1 1 0 2 0 0 3 0 0 0 1 1 0 0 4 2 1 0 0 2 0 0 18 1 1964.9691 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 105 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 1.3501E-116 217.32 By MS/MS By MS/MS 3 3 599810000 342530000 257270000 3613 2088 3996;3997 9030;9031;9032;9033;9034;9035 8303;8304;8305;8306;8307;8308;8309;8310;8311 8305 4118;4119;6874 9 LSVPYVPQVTDEDRLSR GSGYSVERLSVPYVPQ TDEDRLSRRKSIVDTV R L S S R R 0 2 0 2 0 1 1 0 0 0 2 0 0 0 2 2 1 0 1 3 0 0 17 1 1973.0218 A0A1B0GUZ7;Q14156 A0A1B0GUZ7 706 722 EFR3A Protein EFR3 homolog A yes no 3 0.0031122 63.29 By matching By MS/MS 1 1 11396000 6068800 5327200 3614 373 3998 9036;9037 8312 8312 704;6318 1 LSVQSNPSPQLR QLSVQQNKLSVQSNPS SNPSPQLRSVMKVESS K L S L R S 0 1 1 0 0 2 0 0 0 0 2 0 0 0 2 3 0 0 0 1 0 0 12 0 1324.7099 O75152;E9PBY7;E9PQ61 O75152 125 136 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.00067343 106.29 By MS/MS By MS/MS 1 1 22757000 11912000 10846000 3615 1431 3999 9038;9039 8313;8314 8313 2639 2 LSYLPATVEPASPTPAHSLPR TLHTYRGRLSYLPATV TPAHSLPRAKSELTLT R L S P R A 3 1 0 0 0 0 1 0 1 0 3 0 0 0 5 3 2 0 1 1 0 0 21 0 2203.1637 E9PCV4;M0R344;Q9NRA0 E9PCV4 170 190 SPHK2 Sphingosine kinase 2 yes no 3 0.017902 58.693 By MS/MS By matching 1 1 7761100 3951200 3810000 3616 765 4000 9040;9041 8315 8315 1388 0 LTATPTPLGGMTGFHMQTEDR PIRTPARKLTATPTPL FHMQTEDRTMKSVNDQ K L T D R T 1 1 0 1 0 1 1 3 1 0 2 0 2 1 2 0 5 0 0 0 0 0 21 0 2260.0616 O75533 O75533 431 451 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.0011088 68.625 By MS/MS By matching 1 1 8209400 4024200 4185100 3617 1443 4001 9042;9043 8316 8316 6634 1 LTCHARSMVSEYSAVSR RVHSMSVRLTCHARSM SEYSAVSRNSLKEMGE R L T S R N 2 2 0 0 1 0 1 0 1 0 1 0 1 0 0 4 1 0 1 2 0 0 17 1 1952.9197 A0A0A0MSI1;Q1MX18 A0A0A0MSI1 109 125 INSC Protein inscuteable homolog yes no 2 0.030219 41.202 By MS/MS 1 0 0 0 3618 215 4002 9044 8317 8317 7204 1 LTEGCSFR QPTGGKARLTEGCSFR LTEGCSFRRKQH____ R L T F R R 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 8 0 968.43857 P42677;H0YMV8;Q71UM5;C9J1C5 P42677 73 80 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 2 0.0063656 102.06 By MS/MS By MS/MS 1 1 94892000 50940000 43952000 3619 1698 4003 9045;9046 8318;8319 8319 3116 2 LTFDSSFSPNTGK DQLARGLKLTFDSSFS SFSPNTGKKNAKIKTG K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 3 2 0 0 0 0 0 13 0 1399.662 P21796;C9JI87 P21796 97 109 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 0.00084936 106.42 By MS/MS By MS/MS 1 1 11852000 6896900 4955400 3620 1615 4004 9047;9048 8320;8321 8321 2982;2983;2984 2 LTFDSSFSPNTGKK DQLARGLKLTFDSSFS FSPNTGKKNAKIKTGY K L T K K N 0 0 1 1 0 0 0 1 0 0 1 2 0 2 1 3 2 0 0 0 0 0 14 1 1527.7569 P21796;C9JI87 P21796 97 110 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 0.0010963 106.76 By MS/MS By MS/MS 1 1 50726000 26848000 23878000 3621 1615 4005 9049;9050 8322;8323 8322 2982;2983;2984 2 LTFDTTFSPNTGK DQICQGLKLTFDTTFS TFSPNTGKKSGKIKSS K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 1 4 0 0 0 0 0 13 0 1427.6933 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880 Q5JSD2 108 120 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2 0.00016265 113.43 By MS/MS By MS/MS 1 1 9421300 4534200 4887100 3622 167 4006 9051;9052 8324;8325;8326 8325 298 3 LTFDTTFSPNTGKK DQICQGLKLTFDTTFS FSPNTGKKSGKIKSSY K L T K K S 0 0 1 1 0 0 0 1 0 0 1 2 0 2 1 1 4 0 0 0 0 0 14 1 1555.7882 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880 Q5JSD2 108 121 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2;3 6.4224E-06 120.21 By MS/MS By MS/MS 2 2 44610000 23250000 21360000 3623 167 4007 9053;9054;9055;9056 8327;8328;8329;8330;8331;8332;8333 8329 298 7 LTGSTSSLNK SLHGSSGKLTGSTSSL GSTSSLNKLSVQSSGN K L T N K L 0 0 1 0 0 0 0 1 0 0 2 1 0 0 0 3 2 0 0 0 0 0 10 0 1006.5295 Q9NV70 Q9NV70 467 476 EXOC1 Exocyst complex component 1 yes yes 2 0.0019495 92.866 By MS/MS By MS/MS 2 3 12072000 7345500 4726800 3624 2738 4008 9057;9058;9059;9060;9061 8334;8335;8336;8337 8335 5604;5605;7071 4 LTIAEER LPRGKGIRLTIAEERD RLTIAEERDKRLAAKQ R L T E R D 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 7 0 830.44978 P62701;Q8TD47 P62701 246 252 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 2 0.0076584 124.34 By MS/MS By MS/MS 1 1 3903500 1770900 2132600 3625 1798 4009 9062;9063 8338;8339 8339 2 LTLEGLEEDDDDRVSPTVLHK KKSRFRVKLTLEGLEE VSPTVLHKMSNSLEIS K L T H K M 0 1 0 4 0 0 3 1 1 0 4 1 0 0 1 1 2 0 0 2 0 0 21 1 2380.1758 Q9NPB8 Q9NPB8 161 181 GPCPD1 Glycerophosphocholine phosphodiesterase GPCPD1 yes yes 3 0.0039996 54.764 By MS/MS By MS/MS 1 1 10319000 5228500 5090100 3626 2702 4010 9064;9065 8340;8341 8340 5512 2 LTLNSPIFDKPLSR LPEGYLEKLTLNSPIF IFDKPLSRRLRRVSLS K L T S R R 0 1 1 1 0 0 0 0 0 1 3 1 0 1 2 2 1 0 0 0 0 0 14 1 1599.8984 H0YBX5;E5RJM2;E5RGN0;A0A087WZU2;Q00536;E5RIY8;E5RIU4 H0YBX5 94 107 CDK16 Cyclin-dependent kinase 16 yes no 2;3 4.5073E-05 117.48 By MS/MS By MS/MS 2 2 23144000 13884000 9260600 3627 117 4011 9066;9067;9068;9069 8342;8343;8344;8345 8343 208 4 LTLSALLDGK QTLKPGIKLTLSALLD LSALLDGKNVNAGGHK K L T G K N 1 0 0 1 0 0 0 1 0 0 4 1 0 0 0 1 1 0 0 0 0 0 10 0 1029.607 P21796 P21796 257 266 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 2 0.0073264 80.688 By MS/MS By matching 1 1 1675800 1140700 535040 3628 1615 4012 9070;9071 8346 8346 1 LTPAEEENNSFQRLSP PRKLPTLKLTPAEEEN NSFQRLSP________ K L T S P - 1 1 2 0 0 1 3 0 0 0 2 0 0 1 2 2 1 0 0 0 0 0 16 1 1830.8748 Q5HYI7 Q5HYI7 297 312 MTX3 Metaxin-3 yes yes 2 0.0035304 68.413 By MS/MS By matching 1 1 28003000 13489000 14514000 3629 2069 4013 9072;9073 8347 8347 4062 1 LTPRPSPSPMIESTPMSIAGDATPLLDEMDR ERRKQKQRLTPRPSPS PLLDEMDR________ R L T D R - 2 2 0 3 0 0 2 1 0 2 3 0 3 0 6 4 3 0 0 0 0 0 31 1 3324.604 Q7KZ85 Q7KZ85 1696 1726 SUPT6H Transcription elongation factor SPT6 yes yes 3 0.0040656 46.813 By MS/MS 1 13712000 13712000 0 3630 2196 4014 9074 8348 8348 297 6927 1 LTPSPDIIVLSDNEASSPR RSEPERGRLTPSPDII DNEASSPRSSSRMEER R L T P R S 1 1 1 2 0 0 1 0 0 2 2 0 0 0 3 4 1 0 0 1 0 0 19 0 2010.0269 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 119 137 GATAD2B Transcriptional repressor p66-beta yes no 2;3 0.0088216 57.171 By MS/MS By MS/MS 4 4 110140000 58960000 51177000 3631 352 4015;4016 9075;9076;9077;9078;9079;9080;9081;9082 8349;8350;8351;8352;8353;8354 8350 649;650;651;652;6314 6 LTPVRPAAASPIVSGAR HTMKPAPRLTPVRPAA SPIVSGARRRRVRCRK R L T A R R 4 2 0 0 0 0 0 1 0 1 1 0 0 0 3 2 1 0 0 2 0 0 17 1 1661.9577 I3VM54;Q9Y2K7 I3VM54 532 548 KDM2A Lysine-specific demethylase 2A yes no 3 0.0019569 65.374 By MS/MS By MS/MS 2 2 11026000 6834600 4191500 3632 1216 4017 9083;9084;9085;9086 8355;8356;8357 8355 2202;6558 3 LTPVSLSNSPIK VTKELYVKLTPVSLSN SLSNSPIKGADCQEVP K L T I K G 0 0 1 0 0 0 0 0 0 1 2 1 0 0 2 3 1 0 0 1 0 0 12 0 1254.7184 P46100 P46100 590 601 ATRX Transcriptional regulator ATRX yes yes 2 0.001594 94.023 By matching By MS/MS 1 1 12834000 6789900 6044200 3633 1708 4018 9087;9088 8358 8358 3161;3162;3163 1 LTPVSLSNSPIKGADCQEVPQDKDGYK VTKELYVKLTPVSLSN PQDKDGYKSCGLNPKL K L T Y K S 1 0 1 3 1 2 1 2 0 1 2 3 0 0 3 3 1 0 1 2 0 0 27 2 2945.4441 P46100 P46100 590 616 ATRX Transcriptional regulator ATRX yes yes 4 0.0093375 41.672 By MS/MS By matching 1 1 11677000 6250500 5426400 3634 1708 4019 9089;9090 8359 8359 3161;3162;3163 1 LTPVSPESSSTEEK EHGGKRSRLTPVSPES ESSSTEEKSSSQPSSC R L T E K S 0 0 0 0 0 0 3 0 0 0 1 1 0 0 2 4 2 0 0 1 0 0 14 0 1489.7148 E7EMC7;Q13501 E7EMC7 268 281 SQSTM1 Sequestosome-1 yes no 2 0.0008132 102.53 By MS/MS By MS/MS 1 1 29292000 15681000 13611000 3635 704 4020 9091;9092 8360;8361 8361 1249 2 LTQAEISEQPTMATVVPQVPTSPK PKRNDSTRLTQAEISE PQVPTSPKSSLSVQPG R L T P K S 2 0 0 0 0 3 2 0 0 1 1 1 1 0 4 2 4 0 0 3 0 0 24 0 2551.3204 C9K0J5;Q70E73 C9K0J5 1185 1208 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 3 0.0072939 50.055 By matching By MS/MS 1 1 20674000 12056000 8618000 3636 626 4021 9093;9094 8362 8362 6387 1 LTQTSSTEQLNVLETETEVLNK KPVDETTKLTQTSSTE TETEVLNKEAVEVKGG K L T N K E 0 0 2 0 0 2 4 0 0 0 4 1 0 0 0 2 5 0 0 2 0 0 22 0 2476.2544 Q5JSH3;H7BY83 Q5JSH3 157 178 WDR44 WD repeat-containing protein 44 yes no 2 4.7614E-14 115.68 By MS/MS By MS/MS 1 1 28733000 12610000 16124000 3637 2073 4022 9095;9096 8363;8364;8365 8365 4072;4073 3 LTQYHGGSLPNVSQLR FQKLQQLRLTQYHGGS LPNVSQLRSSASEFQP R L T L R S 0 1 1 0 0 2 0 2 1 0 3 0 0 0 1 2 1 0 1 1 0 0 16 0 1768.922 Q6UUV7;H0YK33 Q6UUV7 55 70 CRTC3 CREB-regulated transcription coactivator 3 yes no 2;3 0.0016222 66.738 By MS/MS By MS/MS 2 2 51116000 30118000 20998000 3638 2169 4023 9097;9098;9099;9100 8366;8367;8368 8367 4330 3 LTRPAASPAVGEK SPSPAREKLTRPAASP ASPAVGEKLKKTEPAA K L T E K L 3 1 0 0 0 0 1 1 0 0 1 1 0 0 2 1 1 0 0 1 0 0 13 1 1295.7197 F5H0Q6;A0A0A0MQS2;Q8N2M8 F5H0Q6 541 553 CLASRP CLK4-associating serine/arginine rich protein yes no 2;3 0.00062903 97.502 By MS/MS By MS/MS 2 2 22217000 9077300 13139000 3639 161 4024 9101;9102;9103;9104 8369;8370;8371;8372 8370 293 4 LTSQSEAMALQSIR ESSKNKSRLTSQSEAM AMALQSIRNMRGNSHC R L T I R N 2 1 0 0 0 2 1 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 14 0 1533.7821 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C0A7 A0A087X1U1 496 509 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 1.2979E-07 124.42 By MS/MS By MS/MS 2 2 33341000 18393000 14947000 3640 142 4025;4026 9105;9106;9107;9108 8373;8374;8375;8376;8377 8376 15 246;247 5 LTSSLEAGLQR LTDPPTARLTSSLEAG SLEAGLQRDLLMHSRR R L T Q R D 1 1 0 0 0 1 1 1 0 0 3 0 0 0 0 2 1 0 0 0 0 0 11 0 1173.6354 B7Z879;A0A087WXL6;Q9H270 B7Z879 911 921 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes no 2 0.0051717 75.819 By MS/MS By MS/MS 1 1 3770600 2544100 1226500 3641 88 4027 9109;9110 8378;8379 8378 162;163 2 LTSTSTSDTQNINNSAQR ASGVRRGRLTSTSTSD NINNSAQRRTALLNYE R L T Q R R 1 1 3 1 0 2 0 0 0 1 1 0 0 0 0 4 4 0 0 0 0 0 18 0 1936.9086 Q8WU20 Q8WU20 325 342 FRS2 Fibroblast growth factor receptor substrate 2 yes yes 2 0.007094 59.248 By MS/MS 1 3090500 3090500 0 3642 2397 4028 9111 8380 8380 4791;6975 1 LTTTGQVTSPVK KKAVVQAKLTTTGQVT GQVTSPVKGASFVTST K L T V K G 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 1 4 0 0 2 0 0 12 0 1230.682 P49916;K7ENR9;K7ERZ5 P49916 202 213 LIG3 DNA ligase 3 yes no 2 4.2326E-14 160.56 By MS/MS 1 106350000 106350000 0 3643 1735 4029 9112 8381 8381 3287;6726 1 LTTTGQVTSPVKGASFVTSTNPR KKAVVQAKLTTTGQVT FVTSTNPRKFSGFSAK K L T P R K 1 1 1 0 0 1 0 2 0 0 1 1 0 1 2 3 6 0 0 3 0 0 23 1 2348.2336 P49916;K7ENR9;K7ERZ5 P49916 202 224 LIG3 DNA ligase 3 yes no 2;3 4.335E-14 102.07 By MS/MS By MS/MS 2 2 368590000 215040000 153550000 3644 1735 4030 9113;9114;9115;9116 8382;8383;8384 8382 3287;6726 3 LTTVCPTSK HADGLCHRLTTVCPTS TTVCPTSKPQTQGLAK R L T S K P 0 0 0 0 1 0 0 0 0 0 1 1 0 0 1 1 3 0 0 1 0 0 9 0 1005.5165 P12931 P12931 244 252 SRC Proto-oncogene tyrosine-protein kinase Src yes yes 2 0.027474 43.501 By MS/MS By matching 1 1 7694600 3569300 4125300 3645 1573 4031 9117;9118 8385 8385 0 LTVQEFPGDKWNPITGNR GNTWKPRKLTVQEFPG WNPITGNRKTSQSGRE K L T N R K 0 1 2 1 0 1 1 2 0 1 1 1 0 1 2 0 2 1 0 1 0 0 18 1 2071.0487 Q9ULL8 Q9ULL8 962 979 SHROOM4 Protein Shroom4 yes yes 3 0.0020499 59.261 By MS/MS 1 2837700 0 2837700 3646 2852 4032 9119 8386 8386 7095 1 LTWHSCPEDEAQ VIAFYEERLTWHSCPE SCPEDEAQ________ R L T A Q - 1 0 0 1 1 1 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 0 12 0 1471.6038 Q13185 Q13185 172 183 CBX3 Chromobox protein homolog 3 yes yes 2 7.741E-07 128.08 By MS/MS By MS/MS 2 2 77254000 47568000 29686000 3647 1902 4033;4034 9120;9121;9122;9123 8387;8388;8389 8388 3638;6791 3 LVAASQAALGL CFAEEGKKLVAASQAA ASQAALGL________ K L V G L - 4 0 0 0 0 1 0 1 0 0 3 0 0 0 0 1 0 0 0 1 0 0 11 0 1012.5917 CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;C9JKR2;A0A087WWT3 CON__P02768-1 599 609 ALB Serum albumin yes no 2 0.0058954 93.195 By MS/MS 1 0 0 0 + 3648 633 4035 9124 8390 8390 1 LVAIVDVIDQNR SFGPHAGKLVAIVDVI VDVIDQNRALVDGPCT K L V N R A 1 1 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 3 0 0 12 0 1353.7616 P50914;E7EPB3 P50914 24 35 RPL14 60S ribosomal protein L14 yes no 2 1.3425E-06 123.86 By MS/MS By matching 1 1 3863100 2409700 1453400 3649 1740 4036 9125;9126 8391 8391 1 LVDVSPDRGSPPSRVPQALNFSPEESDSTFSK SNRKTDSRLVDVSPDR ESDSTFSKSTATEVAR R L V S K S 1 2 1 3 0 1 2 1 0 0 2 1 0 2 5 7 1 0 0 3 0 0 32 2 3444.6797 Q9NYZ3 Q9NYZ3 571 602 GTSE1 G2 and S phase-expressed protein 1 yes yes 4 0.0031638 46.415 By matching By MS/MS 1 1 7421000 3220100 4200900 3650 2762 4037 9127;9128 8392 8392 5674 1 LVEAPEQPGPLTPSLLGPGRPR LRPRQPQRLVEAPEQP LLGPGRPRQQKQPLMG R L V P R Q 1 2 0 0 0 1 2 3 0 0 4 0 0 0 6 1 1 0 0 1 0 0 22 1 2280.259 A0A1B0GUN3 A0A1B0GUN3 348 369 yes yes 3 0.0040512 54.368 By matching By MS/MS 1 1 4586200 1921100 2665100 3651 372 4038 9129;9130 8393 8393 6317 1 LVEPHSPSPSSK RSATPKVRLVEPHSPS HSPSPSSKFSTKGLCK R L V S K F 0 0 0 0 0 0 1 0 1 0 1 1 0 0 3 4 0 0 0 1 0 0 12 0 1263.6459 O15014 O15014 571 582 ZNF609 Zinc finger protein 609 yes yes 2;3 5.4083E-05 116.98 By MS/MS By MS/MS 2 1 25391000 15542000 9849100 3652 1351 4039;4040 9131;9132;9133 8394;8395 8395 2465;2466;2467 1 LVEQANSPK QEELASGKLVEQANSP VEQANSPKHQWGEEEP K L V P K H 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 9 0 984.52401 O95391 O95391 209 217 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 2 0.0033743 96.171 By MS/MS By MS/MS 3 2 12144000 5924100 6220300 3653 1487 4041 9134;9135;9136;9137;9138 8396;8397;8398;8399;8400 8397 2755 5 LVESPKEGK SGFSPAPKLVESPKEG VESPKEGKGSKPSPLS K L V G K G 0 0 0 0 0 0 2 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 9 1 985.54441 Q96S94 Q96S94 335 343 CCNL2 Cyclin-L2 yes yes 2 0.024325 79.07 By MS/MS 1 0 0 0 3654 2540 4042 9139 8401 8401 1 LVFDNQLTIKSPSKR SHTLKGRRLVFDNQLT TIKSPSKRELAKVHQN R L V K R E 0 1 1 1 0 1 0 0 0 1 2 2 0 1 1 2 1 0 0 1 0 0 15 2 1744.9836 J3QR52;J3QLN7;Q99741 J3QR52 96 110 CDC6 Cell division control protein 6 homolog yes no 3 0.003388 65.716 By MS/MS 1 3721700 3721700 0 3655 1250 4043 9140 8402 8402 2264 1 LVGATATSSPPPK ________________ ATSSPPPKARSNENLD R L V P K A 2 0 0 0 0 0 0 1 0 0 1 1 0 0 3 2 2 0 0 1 0 0 13 0 1224.6714 Q96QD9;H9KVD1 Q96QD9 8 20 FYTTD1 UAP56-interacting factor yes no 2 0.0016034 91.845 By MS/MS By MS/MS 1 1 15500000 7933000 7566500 3656 2530 4044 9141;9142 8403;8404 8404 5106;5107 1 LVGATATSSPPPKAR ________________ SSPPPKARSNENLDKI R L V A R S 3 1 0 0 0 0 0 1 0 0 1 1 0 0 3 2 2 0 0 1 0 0 15 1 1451.8096 Q96QD9;H9KVD1 Q96QD9 8 22 FYTTD1 UAP56-interacting factor yes no 2;3 0.010917 78.191 By MS/MS By MS/MS 1 1 0 0 0 3657 2530 4045 9143;9144 8405;8406 8405 5106;5107 2 LVGIISSR DTGRMGSRLVGIISSR LVGIISSRDIDFLKEE R L V S R D 0 1 0 0 0 0 0 1 0 2 1 0 0 0 0 2 0 0 0 1 0 0 8 0 843.5178 H0Y4R1;P12268;E7ETK5 H0Y4R1 86 93 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 2 0.01006 107.32 By MS/MS By MS/MS 1 1 2873800 1810600 1063200 3658 1018 4046 9145;9146 8407;8408 8408 2 LVGLNLSPPMSPVQLPLR LQLIEQQKLVGLNLSP SPVQLPLRAWTEGAKR K L V L R A 0 1 1 0 0 1 0 1 0 0 5 0 1 0 4 2 0 0 0 2 0 0 18 0 1930.1074 Q8N0Z3 Q8N0Z3 754 771 SPICE1 Spindle and centriole-associated protein 1 yes yes 2 0.00010395 81.51 By MS/MS By matching 2 1 13103000 11754000 1348800 3659 2294 4047;4048 9147;9148;9149 8409;8410 8410 308 4603;4604 2 LVGMDPEQASVTNQNEYAR DGCSFPTRLVGMDPEQ TNQNEYARSSGSNQPF R L V A R S 2 1 2 1 0 2 2 1 0 0 1 0 1 0 1 1 1 0 1 2 0 0 19 0 2120.9797 B4DRN8;Q5W0Z9 B4DRN8 233 251 ZDHHC20 Palmitoyltransferase;Probable palmitoyltransferase ZDHHC20 yes no 2;3 1.156E-07 109.95 By MS/MS By MS/MS 3 3 43146000 24010000 19137000 3660 488 4049;4050 9150;9151;9152;9153;9154;9155 8411;8412;8413;8414;8415 8415 54 7291 5 LVHDSLEDLQMTR DPEAIPVKLVHDSLED LEDLQMTRYHFAMNGK K L V T R Y 0 1 0 2 0 1 1 0 1 0 3 0 1 0 0 1 1 0 0 1 0 0 13 0 1555.7664 A0A087WYY3;Q9H7F0 A0A087WYY3 536 548 ATP13A3 Probable cation-transporting ATPase 13A3 yes no 2 0.0059125 70.272 By matching By MS/MS 1 1 7679900 3591000 4088900 3661 102 4051 9156;9157 8416 8416 191 1 LVHSGSGCRSPSLGSDLTFATR SYPLVATRLVHSGSGC SDLTFATRTGSRQGIE R L V T R T 1 2 0 1 1 0 0 3 1 0 3 0 0 1 1 5 2 0 0 1 0 0 22 1 2304.1281 Q13425 Q13425 384 405 SNTB2 Beta-2-syntrophin yes yes 3 0.021498 41.905 By matching By MS/MS 1 1 24233000 15047000 9185300 3662 1914 4052 9158;9159 8417 8417 3673 1 LVIITAGAR YNVTANSKLVIITAGA VIITAGARQQEGESRL K L V A R Q 2 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 912.57565 P00338;F5GXH2;F5GYU2;F5GXY2 P00338 91 99 LDHA L-lactate dehydrogenase A chain yes no 2 0.0017286 150.84 By MS/MS By MS/MS 1 1 5298900 3065800 2233000 3663 1509 4053 9160;9161 8418;8419 8419 2 LVILANNCPALR MIRQGKAKLVILANNC ANNCPALRKSEIEYYA K L V L R K 2 1 2 0 1 0 0 0 0 1 3 0 0 0 1 0 0 0 0 1 0 0 12 0 1352.7598 E5RI99;P62888;E5RJH3 E5RI99 45 56 RPL30 60S ribosomal protein L30 yes no 2 0.0057838 83.005 By matching By MS/MS 1 1 2652500 1460900 1191700 3664 700 4054 9162;9163 8420 8420 1 LVINGNPITIFQERDPSK TVKAENGKLVINGNPI FQERDPSKIKWGDAGA K L V S K I 0 1 2 1 0 1 1 1 0 3 1 1 0 1 2 1 1 0 0 1 0 0 18 1 2040.1004 P04406 P04406 67 84 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 3 0.0010421 76.82 By MS/MS By matching 1 1 3556700 1599800 1956900 3665 1522 4055 9164;9165 8421 8421 1 LVLAESPQPK GEHQQNSKLVLAESPQ LAESPQPKGKNK____ K L V P K G 1 0 0 0 0 1 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1080.6179 E7EUR8;A0A1B0GVL4;P78312 E7EUR8 993 1002 FAM193A Protein FAM193A yes no 2 0.0017012 98.156 By MS/MS By MS/MS 1 1 32742000 18757000 13985000 3666 379 4056 9166;9167 8422;8423 8422 717 2 LVLPAPQISDAELQEVVK EFTKKRSKLVLPAPQI AELQEVVKVGQASEIA K L V V K V 2 0 0 1 0 2 2 0 0 1 3 1 0 0 2 1 0 0 0 3 0 0 18 0 1948.0881 Q99459 Q99459 295 312 CDC5L Cell division cycle 5-like protein yes yes 2 3.287E-13 123.14 By MS/MS By MS/MS 1 1 11153000 7695400 3457700 3667 2548 4057 9168;9169 8424;8425 8424 5156 2 LVLVGDGGTGK GEPQVQFKLVLVGDGG VGDGGTGKTTFVKRHL K L V G K T 0 0 0 1 0 0 0 4 0 0 2 1 0 0 0 0 1 0 0 2 0 0 11 0 1014.571 B5MDF5;J3KQE5;P62826;H0YFC6 B5MDF5 13 23 RAN GTP-binding nuclear protein Ran yes no 2 0.00013224 117.31 By MS/MS By MS/MS 1 1 20601000 11659000 8941500 3668 506 4058 9170;9171 8426;8427 8427 2 LVNEAPVYSVYSK EALELYNKLVNEAPVY PVYSVYSKLHPPAHYP K L V S K L 1 0 1 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 2 3 0 0 13 0 1467.7609 O75886 O75886 364 376 STAM2 Signal transducing adapter molecule 2 yes yes 2 0.0090191 80.979 By MS/MS 1 3240600 3240600 0 3669 1449 4059 9172 8428 8428 2681 0 LVNIMPYELTR PCNKFKNRLVNIMPYE IMPYELTRVCLQPIRG R L V T R V 0 1 1 0 0 0 1 0 0 1 2 0 1 0 1 0 1 0 1 1 0 0 11 0 1347.7221 H0Y380;H0Y4H1;H0Y7Z9;H0Y6Z7;P10586 H0Y380 742 752 PTPRF Receptor-type tyrosine-protein phosphatase F yes no 2 0.00235 79.974 By MS/MS By matching 1 1 7898000 4693000 3205000 3670 1010 4060 9173;9174 8429 8429 7435 1 LVPGGGATEIELAK KVLTRDKRLVPGGGAT ATEIELAKQITSYGET R L V A K Q 2 0 0 0 0 0 2 3 0 1 2 1 0 0 1 0 1 0 0 1 0 0 14 0 1353.7504 P50990 P50990 408 421 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0055413 75.416 By MS/MS By MS/MS 1 1 3990600 2366900 1623700 3671 1741 4061 9175;9176 8430;8431 8430 2 LVPSDKFSPR AIIRSGARLVPSDKFS PSDKFSPRIRANSISR R L V P R I 0 1 0 1 0 0 0 0 0 0 1 1 0 1 2 2 0 0 0 1 0 0 10 1 1144.6241 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1155 1164 CEP170 Centrosomal protein of 170 kDa yes no 2 0.027135 62.799 By matching By MS/MS 1 1 10047000 5170000 4876700 3672 1006 4062 9177;9178 8432 8432 0 LVPSQEETKLSVEESEAAGDGVDTK LEEKVRAKLVPSQEET AGDGVDTKVAQGATEK K L V T K V 2 0 0 2 0 1 5 2 0 0 2 2 0 0 1 3 2 0 0 3 0 0 25 1 2617.2607 P49321 P49321 418 442 NASP Nuclear autoantigenic sperm protein yes yes 3 0.00035343 60.517 By MS/MS By MS/MS 1 1 18931000 10489000 8441700 3673 1723 4063 9179;9180 8433;8434 8433 3228;6717 2 LVQDVANNTNEEAGDGTTTATVLAR KYKNIGAKLVQDVANN TTATVLARSIAKEGFE K L V A R S 4 1 3 2 0 1 2 2 0 0 2 0 0 0 0 0 5 0 0 3 0 0 25 0 2559.2413 P10809;E7EXB4;E7ESH4;C9JL25 P10809 97 121 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2;3 1.0181E-09 87.511 By MS/MS By MS/MS 2 2 53827000 26038000 27789000 3674 1557 4064 9181;9182;9183;9184 8435;8436;8437 8436 3 LVQNCLWTLRNLSDAATK HLTDPSQRLVQNCLWT NLSDAATKQEGMEGLL R L V T K Q 2 1 2 1 1 1 0 0 0 0 4 1 0 0 0 1 2 1 0 1 0 0 18 1 2102.0943 B4DGU4;P35222 B4DGU4 370 387 CTNNB1 Catenin beta-1 yes no 3 0.030358 43.024 By MS/MS By matching 1 1 47768000 26296000 21471000 3675 481 4065 9185;9186 8438 8438 0 LVQSPNSYFMDVK KRKHKKKRLVQSPNSY NSYFMDVKCPGCYKIT R L V V K C 0 0 1 1 0 1 0 0 0 0 1 1 1 1 1 2 0 0 1 2 0 0 13 0 1526.7439 P42677;Q5T4L4;H0YMV8;Q71UM5;C9JLI6 P42677 24 36 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 2 0.019522 58.592 By matching By MS/MS 1 1 6706400 3961300 2745100 3676 1698 4066 9187;9188 8439 8439 3117 1 LVRLSSDSFAR SDPALRSKLVRLSSDS LSSDSFARLVELFCSR K L V A R L 1 2 0 1 0 0 0 0 0 0 2 0 0 1 0 3 0 0 0 1 0 0 11 1 1249.6779 A0A087WSV0;Q9HB09 A0A087WSV0 154 164 BCL2L12 Bcl-2-like protein 12 yes no 2 0.0063429 76.24 By MS/MS By matching 1 1 18073000 9330200 8743000 3677 19 4067 9189;9190 8440 8440 43 1 LVSFHDDSDEDLLHI QKTVSSTKLVSFHDDS SDEDLLHI________ K L V H I - 0 0 0 4 0 0 1 0 2 1 3 0 0 1 0 2 0 0 0 1 0 0 15 0 1753.8159 P11717 P11717 2477 2491 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2;3 1.7383E-23 150.34 By MS/MS By MS/MS 4 4 510270000 320460000 189810000 3678 1567 4068;4069 9191;9192;9193;9194;9195;9196;9197;9198 8441;8442;8443;8444;8445;8446;8447;8448 8445 2882;2883 8 LVSIEKEKIDEK KIAQLEGKLVSIEKEK EKEKIDEKSETEKLLE K L V E K S 0 0 0 1 0 0 3 0 0 2 1 3 0 0 0 1 0 0 0 1 0 0 12 2 1429.8028 O75330 O75330 216 227 HMMR Hyaluronan mediated motility receptor no no 1 NaN 0 0 0 3679 1432 0 LVSVQEDAGKSPAR SNTPLSTRLVSVQEDA DAGKSPARNRSASITN R L V A R N 2 1 0 1 0 1 1 1 0 0 1 1 0 0 1 2 0 0 0 2 0 0 14 1 1455.7682 E9PDH4;Q9Y2I7 E9PDH4 289 302 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes no 2 0.001831 107.11 By MS/MS By MS/MS 1 1 2239800 2239800 0 3680 770 4070 9199;9200 8449;8450 8449 1394 2 LVTSGAESGNLNTSPSSNQTR DSFKQLAKLVTSGAES SPSSNQTRNSEKFEKP K L V T R N 1 1 3 0 0 1 1 2 0 0 2 0 0 0 1 5 3 0 0 1 0 0 21 0 2119.0142 Q8NHV4 Q8NHV4 503 523 NEDD1 Protein NEDD1 yes yes 2;3 0.00077082 69.737 By MS/MS By MS/MS 2 2 59713000 36811000 22902000 3681 2362 4071 9201;9202;9203;9204 8451;8452 8451 4737;6969 2 LVVTELPVSFSRPLQDVVTTEK EGVHTSARLVVTELPV QDVVTTEKEKVTLECE R L V E K E 0 1 0 1 0 1 2 0 0 0 3 1 0 1 2 2 3 0 0 5 0 0 22 1 2456.3526 A6NGQ3;Q5VST9 A6NGQ3 2534 2555 OBSCN Obscurin yes no 3 0.0083019 43.992 By MS/MS By matching 1 1 15401000 8127400 7273800 3682 414 4072 9205;9206 8453 8453 6326;6327;6328 1 LVYENINGLSIPSASGVR RDAPSVNKLVYENING IPSASGVRRGRLTSTS K L V V R R 1 1 2 0 0 0 1 2 0 2 2 0 0 0 1 3 0 0 1 2 0 0 18 0 1888.0054 Q8WU20 Q8WU20 304 321 FRS2 Fibroblast growth factor receptor substrate 2 yes yes 2 4.2609E-05 83.499 By MS/MS By MS/MS 1 1 6583700 4133000 2450700 3683 2397 4073 9207;9208 8454;8455 8454 7816 2 LWDLTTGTTTR GSWDGTLRLWDLTTGT LTTGTTTRRFVGHTKD R L W T R R 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 5 1 0 0 0 0 11 0 1263.6459 D6RAU2;E9PD14;D6RFX4;D6RFZ9;D6RHH4;D6R9Z1;D6R9L0;P63244;H0YAF8;J3KPE3;H0Y8W2 D6RAU2 89 99 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.0066304 81.972 By MS/MS By MS/MS 1 1 2899800 1431000 1468800 3684 645 4074 9209;9210 8456;8457 8457 2 LWMEAMDGKEPIYHSPITK ALSEANRRLWMEAMDG IYHSPITKQQEMELNE R L W T K Q 1 0 0 1 0 0 2 1 1 2 1 2 2 0 2 1 1 1 1 0 0 0 19 1 2245.0911 O60890 O60890 358 376 OPHN1 Oligophrenin-1 yes yes 3 0.0017998 63.145 By MS/MS By matching 1 1 6959300 3874000 3085400 3685 1425 4075 9211;9212 8458 8458 7532 1 LYANMFER RQLAREKKLYANMFER LYANMFERLAEEENKA K L Y E R L 1 1 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 8 0 1042.4906 Q02790;H0YFG2 Q02790 410 417 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 2 0.0027092 119.41 By MS/MS By MS/MS 1 1 3374500 1784700 1589800 3686 1841 4076 9213;9214 8459;8460 8459 7664 2 LYDIDVAK QIKQAVKKLYDIDVAK LYDIDVAKVNTLIRPD K L Y A K V 1 0 0 2 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 8 0 935.4964 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 118 125 RPL23A 60S ribosomal protein L23a yes no 2 0.018628 87.754 By MS/MS 1 1451900 0 1451900 3687 433 4077 9215 8461 8461 1 LYDLNMPAYVK SFVDPGERLYDLNMPA LNMPAYVKF_______ R L Y V K F 1 0 1 1 0 0 0 0 0 0 2 1 1 0 1 0 0 0 2 1 0 0 11 0 1325.669 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333 C9K098 104 114 NCK1 Cytoplasmic protein NCK1 yes no 2 0.00038903 106.2 By MS/MS By MS/MS 1 1 6628800 3497800 3131000 3688 570 4078 9216;9217 8462;8463 8462 7316 2 LYDLPDEPFTR IRKKWNSKLYDLPDEP LPDEPFTRQFYFVHSA K L Y T R Q 0 1 0 2 0 0 1 0 0 0 2 0 0 1 2 0 1 0 1 0 0 0 11 0 1364.6612 Q96NW4 Q96NW4 927 937 ANKRD27 Ankyrin repeat domain-containing protein 27 yes yes 2 3.6585E-06 133.23 By MS/MS By MS/MS 1 1 10832000 5157500 5674200 3689 2521 4079 9218;9219 8464;8465 8464 7849 2 LYEALTPVH MVELAAQRLYEALTPV YEALTPVH________ R L Y V H - 1 0 0 0 0 0 1 0 1 0 2 0 0 0 1 0 1 0 1 1 0 0 9 0 1041.5495 G5E9W3;Q9UKF6 G5E9W3 639 647 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 2 0.0078939 125.82 By MS/MS By MS/MS 1 1 6880300 3884600 2995700 3690 998 4080 9220;9221 8466;8467 8467 6502 2 LYEEDDLDRLEQMEDSEGTVR FKPGLDMRLYEEDDLD EDSEGTVRQIGAFSEG R L Y V R Q 0 2 0 4 0 1 5 1 0 0 3 0 1 0 0 1 1 0 1 1 0 0 21 1 2541.1177 Q86W92;H0YFE4 Q86W92 950 970 PPFIBP1 Liprin-beta-1 yes no 3 2.4478E-50 161.99 By MS/MS By MS/MS 2 2 89203000 56268000 32934000 3691 2247 4081;4082 9222;9223;9224;9225 8468;8469;8470;8471 8470 302 7772 4 LYEQLSGK EWDDYVPKLYEQLSGK LYEQLSGK________ K L Y G K - 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 8 0 936.49165 P30086 P30086 180 187 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 2 0.0034845 104.06 By MS/MS By MS/MS 2 2 9127400 5748700 3378600 3692 1652 4083;4084 9226;9227;9228;9229 8472;8473;8474;8475 8473 7588 4 LYEWISIDKDEAGAK ERLGTRERLYEWISID DKDEAGAKSKAPSVSR R L Y A K S 2 0 0 2 0 0 2 1 0 2 1 2 0 0 0 1 0 1 1 0 0 0 15 1 1736.8621 A0A0A0MTP6;O15357 A0A0A0MTP6 819 833 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 3 0.030627 44.436 By matching By MS/MS 1 1 7762600 4367500 3395100 3693 250 4085 9230;9231 8476 8476 7214 0 LYFCVDR GKSGGRFRLYFCVDRG RLYFCVDRGATKECKE R L Y D R G 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 7 0 971.45349 O14654 O14654 655 661 IRS4 Insulin receptor substrate 4 yes yes 2 5.9906E-12 180.49 By MS/MS By MS/MS 1 1 30383000 20746000 9637000 3694 1343 4086 9232;9233 8477;8478 8477 7505 2 LYGQNSIK QKAEAQRRLYGQNSIK LYGQNSIKRLLPGSSD R L Y I K R 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 1 0 0 1 0 0 0 8 0 921.49198 F2Z2J7;A0A087X234;F2Z2X2;Q6ZT98 F2Z2J7 85 92 TTLL7 Tubulin polyglutamylase TTLL7 yes no 2 0.022364 44.721 By MS/MS 1 0 0 0 3695 145 4087 9234 8479 8479 7182 1 LYGSPTQIGPSYR LPPLQTPKLYGSPTQI TQIGPSYRGMINVSTS K L Y Y R G 0 1 0 0 0 1 0 2 0 1 1 0 0 0 2 2 1 0 2 0 0 0 13 0 1437.7252 E7EWD6;Q76L83 E7EWD6 1288 1300 ASXL2 Putative Polycomb group protein ASXL2 yes no 2 0.0025543 84.173 By MS/MS By MS/MS 1 1 13297000 6730100 6567200 3696 747 4088 9235;9236 8480;8481 8481 1359 2 LYGSVCDLR PPRSEVKRLYGSVCDL YGSVCDLRTNKLPGSP R L Y L R T 0 1 0 1 1 0 0 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 9 0 1081.5226 Q8N9U0 Q8N9U0 153 161 TC2N Tandem C2 domains nuclear protein yes yes 2 0.0010511 130.75 By MS/MS By MS/MS 1 1 6226400 3320000 2906400 3697 2328 4089 9237;9238 8482;8483 8482 7804 2 LYINHTPPPLSK ELKESSAKLYINHTPP HTPPPLSKSKEREMDK K L Y S K S 0 0 1 0 0 0 0 0 1 1 2 1 0 0 3 1 1 0 1 0 0 0 12 0 1378.7609 A0A0C4DG98;Q8NI27;H0Y594;H0Y7U4;B7ZBA0 A0A0C4DG98 1323 1334 THOC2 THO complex subunit 2 yes no 2;3 0.00046622 86.772 By MS/MS By MS/MS 2 2 7848200 6577500 1270700 3698 287 4090 9239;9240;9241;9242 8484;8485;8486 8486 6299 2 LYIQNYTSAVPGTCLTIR APNEFPHKLYIQNYTS PGTCLTIRKWLFTTEE K L Y I R K 1 1 1 0 1 1 0 1 0 2 2 0 0 0 1 1 3 0 2 1 0 0 18 0 2069.0616 Q96L92;A0A0C4DFU6 Q96L92 341 358 SNX27 Sorting nexin-27 yes no 2;3 0.0014653 64.454 By MS/MS By matching 2 2 11554000 7401800 4151900 3699 2515 4091 9243;9244;9245;9246 8487;8488 8487 7847 2 LYLPQEPTSEETPR TPPPKPPRLYLPQEPT PTSEETPRTKRPHMEP R L Y P R T 0 1 0 0 0 1 3 0 0 0 2 0 0 0 3 1 2 0 1 0 0 0 14 0 1658.8152 Q6P5Z2 Q6P5Z2 516 529 PKN3 Serine/threonine-protein kinase N3 yes yes 2 0.00062926 89.805 By MS/MS By MS/MS 1 1 8709900 5018200 3691600 3700 2157 4092 9247;9248 8489;8490;8491 8489 7757 3 LYNSGDFRSSTEDMER AVFLRAVKLYNSGDFR SSTEDMERALSEYLAV K L Y E R A 0 2 1 2 0 0 2 1 0 0 1 0 1 1 0 3 1 0 1 0 0 0 16 1 1905.8163 K7ERA3;Q92791 K7ERA3 96 111 P3H4;LEPREL4 Synaptonemal complex protein SC65 yes no 2 0.028347 41.052 By MS/MS 1 0 0 0 3701 1288 4093 9249 8492 8492 7487 1 LYNTLDDLLLYINAR GRLLEYYRLYNTLDDL LLLYINARELRITYGQ R L Y A R E 1 1 2 2 0 0 0 0 0 1 5 0 0 0 0 0 1 0 2 0 0 0 15 0 1808.9672 Q6UX06 Q6UX06 305 319 OLFM4 Olfactomedin-4 yes yes 2;3 4.4521E-36 166.14 By MS/MS By MS/MS 2 2 43382000 19871000 23511000 3702 2170 4094 9250;9251;9252;9253 8493;8494;8495;8496 8494 4 LYNTRGKSLTQNSAPSR THDSSRQRLYNTRGKS TQNSAPSRSYLRKNPD R L Y S R S 1 2 2 0 0 1 0 1 0 0 2 1 0 0 1 3 2 0 1 0 0 0 17 2 1891.9864 F5H6R4;P17031 F5H6R4 107 123 ZNF26 Zinc finger protein 26 yes no 3 0.026505 44.106 By MS/MS 1 0 0 0 3703 894 4095 9254 8497 8497 7403 1 LYQEMFAWKMVVLSLPR PIEECRYKLYQEMFAW MVVLSLPRIQSQRYQV K L Y P R I 1 1 0 0 0 1 1 0 0 0 3 1 2 1 1 1 0 1 1 2 0 0 17 1 2110.1108 Q14204 Q14204 982 998 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.027777 46.069 By MS/MS 1 1114500 0 1114500 3704 1944 4096 9255 8498 8498 7697 1 LYSILQGDSPTKWR AHVYYRWKLYSILQGD GDSPTKWRTEDFRMFK K L Y W R T 0 1 0 1 0 1 0 1 0 1 2 1 0 0 1 2 1 1 1 0 0 0 14 1 1662.873 O15042 O15042 477 490 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 2;3 0.00066987 106.6 By MS/MS By MS/MS 2 2 11718000 6179000 5538900 3705 1353 4097 9256;9257;9258;9259 8499;8500;8501;8502 8502 2471;6597 4 LYSLLSQCIYR LAVDQLERLYSLLSQC LLSQCIYRHRKDYDKS R L Y Y R H 0 1 0 0 1 1 0 0 0 1 3 0 0 0 0 2 0 0 2 0 0 0 11 0 1414.7279 Q9ULI0;H7BYF1 Q9ULI0 1423 1433 ATAD2B ATPase family AAA domain-containing protein 2B yes no 2 0.021194 43.083 By MS/MS 1 34622000 34622000 0 3706 2846 4098 9260 8503 8503 7941;7942 1 LYSLSVDNFNEVLEEYPMMRR VRADTYCRLYSLSVDN EEYPMMRRAFETVAID R L Y R R A 0 2 2 1 0 0 3 0 0 0 3 0 2 1 1 2 0 0 2 2 0 0 21 1 2604.2352 O60741;Q9UL51;Q9Y3Q4 O60741 561 581 HCN1;HCN2;HCN4 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1;Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2;Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 yes no 3 0.028999 33.836 By MS/MS By matching 1 1 30999000 16086000 14913000 3707 1418 4099 9261;9262 8504 8504 1 LYTLVTYVPVTTFK EDEDSPNKLYTLVTYV YVPVTTFKNLQTVNVD K L Y F K N 0 0 0 0 0 0 0 0 0 0 2 1 0 1 1 0 4 0 2 3 0 0 14 0 1643.9174 P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8 P62899 102 115 RPL31 60S ribosomal protein L31 yes no 2 0.0068726 71.555 By MS/MS By MS/MS 1 1 8342700 5253600 3089200 3708 1804 4100 9263;9264 8505;8506 8506 2 LYVYNDGYLLNYDLSVLQKPQ NYNPFDQKLYVYNDGY LSVLQKPQ________ K L Y P Q - 0 0 2 2 0 2 0 1 0 0 5 1 0 0 1 1 0 0 4 2 0 0 21 1 2517.2791 Q6UX06 Q6UX06 490 510 OLFM4 Olfactomedin-4 yes yes 3 0.00014146 68.411 By MS/MS By MS/MS 1 1 12572000 5507900 7063700 3709 2170 4101 9265;9266 8507;8508;8509 8508 3 MAAAGGTVSGPSSACKPGR LTEELLSRMAAAGGTV SSACKPGRSTTGAPST R M A G R S 4 1 0 0 1 0 0 4 0 0 0 1 1 0 2 3 1 0 0 1 0 0 19 1 1760.8298 A0A087X2H1;Q9ULT8;A0A087WVU6;G3V4V5 A0A087X2H1 240 258 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes no 3 0.0020421 63.69 By MS/MS By MS/MS 1 1 5413000 2985000 2428000 3710 150 4102 9267;9268 8510;8511 8511 262;263 2 MAEAPASPAPLSPLEVELDPEFEPQSRPR ________________ FEPQSRPRSCTWPLQR - M A P R S 4 2 0 1 0 1 5 0 0 0 3 0 1 1 7 3 0 0 0 1 0 0 29 1 3159.5547 O43524;J3KS91 O43524 1 29 FOXO3;ZNF286B Forkhead box protein O3 yes no 3 1.6544E-06 71.656 By matching By MS/MS 1 1 50059000 29592000 20468000 3711 1389 4103 9269;9270 8512 8512 167 2547;2548 1 MAEESSSSSSSSSPTAATSQQQQLK EFVGFDAKMAEESSSS TSQQQQLKNKSILISS K M A L K N 3 0 0 0 0 4 2 0 0 0 1 1 1 0 1 10 2 0 0 0 0 0 25 0 2543.1293 K4DI93;Q13620 K4DI93 121 145 CUL4B Cullin-4B yes no 2;3 0.00039431 62.792 By MS/MS By MS/MS 3 3 86022000 44645000 41377000 3712 1262 4104;4105 9271;9272;9273;9274;9275;9276 8513;8514;8515;8516;8517 8515 2288;2289;2290;2291 5 MAESPCSPSGQQPPSPPSPDELPANVK PSGAAGGKMAESPCSP DELPANVKQAYRAFAA K M A V K Q 2 0 1 1 1 2 2 1 0 0 1 1 1 0 8 5 0 0 0 1 0 0 27 0 2803.2793 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1211 1237 SCRIB Protein scribble homolog yes no 3 0.01369 40.669 By MS/MS 1 4312400 0 4312400 3713 322 4106 9277 8518 8518 599;600;601 1 MAGIFDVNTCYGSPQSPQLIR FGSSVMNRMAGIFDVN PQSPQLIRRGPRLWTS R M A I R R 1 1 1 1 1 2 0 2 0 2 1 0 1 1 2 2 1 0 1 1 0 0 21 0 2353.1195 Q9BTX1 Q9BTX1 459 479 NDC1 Nucleoporin NDC1 yes yes 2 0.0038589 59.512 By MS/MS By matching 1 1 15368000 12277000 3090600 3714 2579 4107 9278;9279 8519 8519 5213 1 MAGNEALSPTSPFR MAQKISERMAGNEALS LSPTSPFREGRPGEWR R M A F R E 2 1 1 0 0 0 1 1 0 0 1 0 1 1 2 2 1 0 0 0 0 0 14 0 1476.7031 Q86WR7;D3DRR9 Q86WR7 205 218 PROSER2;C10orf47 Proline and serine-rich protein 2 yes no 2 0.0019711 80.632 By MS/MS By MS/MS 3 3 22873000 13427000 9445300 3715 2248 4108;4109;4110 9280;9281;9282;9283;9284;9285 8520;8521;8522;8523 8521 303 4502;4503;6944 4 MALPPQEDATASPPR ETAESKEKMALPPQED DATASPPRQKDKFSPF K M A P R Q 3 1 0 1 0 1 1 0 0 0 1 0 1 0 4 1 1 0 0 0 0 0 15 0 1579.7664 Q9UQ35 Q9UQ35 1168 1182 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.022253 55.401 By matching By MS/MS 2 2 12106000 5729000 6376700 3716 2877 4111 9286;9287;9288;9289 8524;8525 8524 5953;7105 1 MALPPQEDATASPPRQK ETAESKEKMALPPQED TASPPRQKDKFSPFPV K M A Q K D 3 1 0 1 0 2 1 0 0 0 1 1 1 0 4 1 1 0 0 0 0 0 17 1 1835.92 Q9UQ35 Q9UQ35 1168 1184 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0009459 72.175 By MS/MS By MS/MS 3 3 22625000 12872000 9753700 3717 2877 4112 9290;9291;9292;9293;9294;9295 8526;8527;8528;8529;8530 8527 5953;7105 5 MANSSPVLSK SAGRSQKKMANSSPVL NSSPVLSKVPGYGLQV K M A S K V 1 0 1 0 0 0 0 0 0 0 1 1 1 0 1 3 0 0 0 1 0 0 10 0 1032.5274 Q9NXE8 Q9NXE8 214 223 CWC25 Pre-mRNA-splicing factor CWC25 homolog yes yes 2 1.2776E-05 145.28 By MS/MS By MS/MS 1 1 11872000 6898900 4973500 3718 2753 4113 9296;9297 8531;8532 8531 5627;5628 2 MANSSPVLSKVPGYGLQVR SAGRSQKKMANSSPVL PGYGLQVRNSDRNQGL K M A V R N 1 1 1 0 0 1 0 2 0 0 2 1 1 0 2 3 0 0 1 3 0 0 19 1 2002.067 Q9NXE8 Q9NXE8 214 232 CWC25 Pre-mRNA-splicing factor CWC25 homolog yes yes 3 0.00065473 71.592 By MS/MS By matching 1 1 9959000 4939000 5020100 3719 2753 4114 9298;9299 8533;8534 8534 5627;5628 2 MAPALSGANLTSPR PASLTSARMAPALSGA GANLTSPRVPLSAYER R M A P R V 3 1 1 0 0 0 0 1 0 0 2 0 1 0 2 2 1 0 0 0 0 0 14 0 1384.7133 Q9UQ35 Q9UQ35 2371 2384 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.00049218 106.82 By MS/MS By MS/MS 2 2 24929000 13526000 11404000 3720 2877 4115;4116 9300;9301;9302;9303 8535;8536;8537;8538 8535 375 5954;7106 3 MAPALSGANLTSPRVPLSAYER PASLTSARMAPALSGA VPLSAYERVSGRTSPP R M A E R V 4 2 1 0 0 0 1 1 0 0 3 0 1 0 3 3 1 0 1 1 0 0 22 1 2300.1947 Q9UQ35 Q9UQ35 2371 2392 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0026746 56.708 By MS/MS By MS/MS 2 2 34130000 17787000 16343000 3721 2877 4117;4118 9304;9305;9306;9307 8539;8540 8540 375 5954;7106 2 MAPPVDDLSPK NCKICIGRMAPPVDDL PVDDLSPKKVKVVVGV R M A P K K 1 0 0 2 0 0 0 0 0 0 1 1 1 0 3 1 0 0 0 1 0 0 11 0 1168.5798 Q92576;E7ER40;E7EVH3 Q92576 1125 1135 PHF3 PHD finger protein 3 yes no 2 4.2721E-06 136.3 By MS/MS By MS/MS 2 3 84276000 46671000 37605000 3722 2425 4119;4120 9308;9309;9310;9311;9312 8541;8542;8543;8544;8545;8546 8545 322 4875 6 MAPTPIPTRSPSDSSTASTPVAEQIER SHLDSHRRMAPTPIPT PVAEQIERALDEVTSS R M A E R A 3 2 0 1 0 1 2 0 0 2 0 0 1 0 5 5 4 0 0 1 0 0 27 1 2825.3865 Q16643;D6R9Q9 Q16643 328 354 DBN1 Drebrin yes no 3 3.0668E-27 117.22 By MS/MS By MS/MS 3 4 158680000 74913000 83770000 3723 2019 4121;4122 9313;9314;9315;9316;9317;9318;9319 8547;8548;8549;8550;8551;8552;8553 8551 272 3945;3946;3947;3948;3949;6844;6845;6846 7 MARYDNGSGYR GDGPRPPKMARYDNGS YDNGSGYRRGGSSYSG K M A Y R R 1 2 1 1 0 0 0 2 0 0 0 0 1 0 0 1 0 0 2 0 0 0 11 1 1288.5619 Q08211 Q08211 1164 1174 DHX9 ATP-dependent RNA helicase A yes yes 1 0.0061927 42.864 By MS/MS By matching 1 1 204430000 114070000 90358000 3724 1863 4123 9320;9321 8554 8554 7673 0 MASNIFGTPEENQASWAK ________________ ENQASWAKSAGAKSSG - M A A K S 3 0 2 0 0 1 2 1 0 1 0 1 1 1 1 2 1 1 0 0 0 0 18 0 1979.9047 J3KSH8;J3KT51;Q9UK76 J3KSH8 1 18 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 2 0.00080506 80.596 By MS/MS By MS/MS 1 1 18655000 10372000 8283300 3725 1242 4124 9322;9323 8555;8556 8556 6566 1 MAVLANGVMNSLQDRYGSY GVKSVAGKMAVLANGV LQDRYGSY________ K M A S Y - 2 1 2 1 0 1 0 2 0 0 2 0 2 0 0 2 0 0 2 2 0 0 19 1 2087.9768 Q8N6H7;A0A0D9SF70;G5E9L0 Q8N6H7 503 521 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 2 0.021895 51.193 By MS/MS By matching 1 1 9112700 6650600 2462000 3726 2321 4125 9324;9325 8557 8557 1 MAVTFIGNSTAIQELFK DIPPRGLKMAVTFIGN TAIQELFKRISEQFTA K M A F K R 2 0 1 0 0 1 1 1 0 2 1 1 1 2 0 1 2 0 0 1 0 0 17 0 1868.9706 Q5JP53;P07437;Q5ST81 Q5JP53 345 361 TUBB Tubulin beta chain yes no 2 6.218E-30 162.32 By MS/MS By MS/MS 1 1 21518000 10332000 11186000 3727 1537 4126 9326;9327 8558;8559 8559 2 MCSLTFYSKSEMQIHSK DGKTYRCRMCSLTFYS SEMQIHSKSHTETKPH R M C S K S 0 0 0 0 1 1 1 0 1 1 1 2 2 1 0 4 1 0 1 0 0 0 17 1 2075.9479 F5H8L7;E9PHB3;Q8TF68 F5H8L7 216 232 ZNF384 Zinc finger protein 384 yes no 2 0.027402 43.544 By MS/MS 1 0 0 0 3728 797 4127 9328 8560 8560 7385 1 MDKNASTFEDVTQVSSAYQK KYGVQKDRMDKNASTF QVSSAYQKTVPVEAVT R M D Q K T 2 0 1 2 0 2 1 0 0 0 0 2 1 1 0 3 2 0 1 2 0 0 20 1 2248.0318 Q14247 Q14247 317 336 CTTN Src substrate cortactin yes yes 3 0.0028686 57.39 By matching By MS/MS 1 1 25586000 14389000 11196000 3729 1945 4128 9329;9330 8561 8561 7702 1 MDMTSPEQSR IDFSKENKMDMTSPEQ MTSPEQSRNVLQFTEE K M D S R N 0 1 0 1 0 1 1 0 0 0 0 0 2 0 1 2 1 0 0 0 0 0 10 0 1180.4853 Q96JM3 Q96JM3 671 680 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.010604 70.685 By MS/MS By MS/MS 1 1 3706600 1720200 1986400 3730 2509 4129 9331;9332 8562;8563 8563 5065 2 MDNITRQNQFYDTQVIK ________________ FYDTQVIKQENESGYE - M D I K Q 0 1 2 2 0 3 0 0 0 2 0 1 1 1 0 0 2 0 1 1 0 0 17 1 2113.0262 A0A0A0MRA5;M0R203;M0QZV6;M0R0K8;M0QYZ0 A0A0A0MRA5 1 17 HNRNPUL1 yes no 2 0.028328 42.382 By MS/MS 1 0 0 0 3731 174 4130 9333 8564 8564 1 MDPIYHTR LDIFGPQKMDPIYHTR MDPIYHTRELPTSSAI K M D T R E 0 1 0 1 0 0 0 0 1 1 0 0 1 0 1 0 1 0 1 0 0 0 8 0 1031.4859 Q12923 Q12923 359 366 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.019328 73.665 By MS/MS 1 0 0 0 3732 1885 4131 9334 8565 8565 7678 1 MDSDEDEKEGEEEKVAK EEEHKKQKMDSDEDEK GEEEKVAKRKAAVLSD K M D A K R 1 0 0 3 0 0 6 1 0 0 0 3 1 0 0 1 0 0 0 1 0 0 17 2 1966.8313 Q96ST2 Q96ST2 375 391 IWS1 Protein IWS1 homolog yes yes 3 0.0013983 70.987 By MS/MS By MS/MS 1 1 31216000 19000000 12216000 3733 2541 4132 9335;9336 8566;8567 8566 5125 2 MDSFDEDLAR REAQVNVRMDSFDEDL SFDEDLARPSGLLAQE R M D A R P 1 1 0 3 0 0 1 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 10 0 1197.4972 Q9Y2W1 Q9Y2W1 573 582 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0003205 110.93 By MS/MS By MS/MS 2 2 14259000 7967000 6292000 3734 2897 4133;4134 9337;9338;9339;9340 8568;8569;8570;8571 8571 380 6031 4 MDSFDEDLARPSGLLAQER REAQVNVRMDSFDEDL SGLLAQERKLCRDLVH R M D E R K 2 2 0 3 0 1 2 1 0 0 3 0 1 1 1 2 0 0 0 0 0 0 19 1 2149.011 Q9Y2W1 Q9Y2W1 573 591 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0032464 65.225 By MS/MS By MS/MS 2 2 150830000 79311000 71517000 3735 2897 4135;4136 9341;9342;9343;9344 8572;8573;8574;8575 8573 380 6031 4 MDSNFGLAGLPGSPK PVDMESTRMDSNFGLA AGLPGSPKKRVRIECK R M D P K K 1 0 1 1 0 0 0 3 0 0 2 1 1 1 2 2 0 0 0 0 0 0 15 0 1489.7235 O43463 O43463 379 393 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 yes yes 2 0.00031098 93.427 By MS/MS By MS/MS 2 2 22031000 10352000 11679000 3736 1385 4137;4138 9345;9346;9347;9348 8576;8577;8578;8579 8578 165 2535 4 MDVPPAILATNKILVDMAKMR ARQKHANKMDVPPAIL LVDMAKMRPTTVENVK K M D M R P 3 1 1 2 0 0 0 0 0 2 2 2 3 0 2 0 1 0 0 2 0 0 21 2 2326.2575 Q14191 Q14191 1171 1191 WRN Werner syndrome ATP-dependent helicase yes yes 3 0.0073393 47.204 By matching By MS/MS 1 1 12534000 5862600 6671500 3737 1943 4139 9349;9350 8580 8580 258;259;260 6811 1 MDYLTTFTEK ________________ YLTTFTEKSGRLLRGT - M D E K S 0 0 0 1 0 0 1 0 0 0 1 1 1 1 0 0 3 0 1 0 0 0 10 0 1247.5744 E5RFD1;C9JY63 E5RFD1 1 10 OXR1 yes no 2 0.0099158 52.255 By MS/MS By MS/MS 1 1 27304000 15382000 11922000 3738 618 4140 9351;9352 8581;8582 8582 66 6384;7328 2 MEGSVDLLQTR DLEEKVTRMEGSVDLL SVDLLQTRFARILAEY R M E T R F 0 1 0 1 0 1 1 1 0 0 2 0 1 0 0 1 1 0 0 1 0 0 11 0 1247.618 P29973 P29973 630 640 CNGA1 cGMP-gated cation channel alpha-1 yes yes 2 0.018908 63.32 By matching By MS/MS 1 1 53047000 26946000 26101000 3739 1649 4141 9353;9354 8583 8583 3053 1 MEIGDTLSTAEESSPPKSR VDSTPKMKMEIGDTLS ESSPPKSRVELGKIHF K M E S R V 1 1 0 1 0 0 3 1 0 1 1 1 1 0 2 4 2 0 0 0 0 0 19 1 2033.9575 C9JG86;Q9BYW2 C9JG86 74 92 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 3 0.0086127 50.053 By MS/MS 1 3622500 3622500 0 3740 591 4142 9355 8584 8584 1080 1 MEISAELPQTPQR EEAGGTERMEISAELP ELPQTPQRLASGLCN_ R M E Q R L 1 1 0 0 0 2 2 0 0 1 1 0 1 0 2 1 1 0 0 0 0 0 13 0 1498.745 H3BS20;H3BNQ6;A0A087WTJ9;Q8IWV7 H3BS20 12 24 UBR1 E3 ubiquitin-protein ligase UBR1 yes no 2 0.0033039 90.689 By MS/MS By MS/MS 1 1 3446300 0 3446300 3741 25 4143 9356;9357 8585;8586 8585 6219 2 MEITIRNSPYR EGELRDHRMEITIRNS TIRNSPYRREDSMEDR R M E Y R R 0 2 1 0 0 0 1 0 0 2 0 0 1 0 1 1 1 0 1 0 0 0 11 1 1378.7027 J3QR29;A0A0D9SEI3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;P21127;A0A087WYI9;A0A087X1I0 J3QR29 24 34 CDK11B;CDC2L1 Cyclin-dependent kinase 11B yes no 3 0.02733 49.35 By MS/MS By matching 1 1 2462200 1229500 1232700 3742 305 4144 9358;9359 8587 8587 7223 1 MENYELIHSSR FGNKTTGKMENYELIH YELIHSSRVKFTYPSE K M E S R V 0 1 1 0 0 0 2 0 1 1 1 0 1 0 0 2 0 0 1 0 0 0 11 0 1377.6347 Q9Y2I1 Q9Y2I1 1304 1314 NISCH Nischarin yes yes 2;3 6.3928E-126 236.22 By MS/MS By MS/MS 2 2 24228000 12742000 11486000 3743 2890 4145 9360;9361;9362;9363 8588;8589;8590;8591 8590 7949 4 MESLSSHRIDEDGENTQIEDTEPMSPVLNSK SEYSQSPKMESLSSHR MSPVLNSKFVPAENDS K M E S K F 0 1 2 3 0 1 5 1 1 2 2 1 2 0 2 5 2 0 0 1 0 0 31 1 3487.5719 Q12888;A6NNK5;C9JXV0 Q12888 528 558 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 4 0.0041281 48.124 By MS/MS By matching 1 1 9822500 5867500 3955000 3744 1882 4146 9364;9365 8592 8592 3574 1 MESMNRPYTSLVPPLSPQPK LEESSKARMESMNRPY PPLSPQPKIVTPYTAS R M E P K I 0 1 1 0 0 1 1 0 0 0 2 1 2 0 5 3 1 0 1 1 0 0 20 1 2271.1392 C9K0J5;Q70E73 C9K0J5 647 666 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 3 0.0017728 63.447 By MS/MS By MS/MS 1 1 12344000 7309500 5034100 3745 626 4147 9366;9367 8593;8594;8595 8594 1144 3 METEADAPSPAPSLGER KNSRIGEKMETEADAP PAPSLGERLEPRKIPL K M E E R L 3 1 0 1 0 0 3 1 0 0 1 0 1 0 3 2 1 0 0 0 0 0 17 0 1756.7938 Q12873 Q12873 1593 1609 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 2 0.022776 57.616 By MS/MS 1 0 0 0 3746 1880 4148 9368 8596 8596 1 METVSNASSSSNPSSPGR QSQTKSSRMETVSNAS SNPSSPGRIKGRLDSS R M E G R I 1 1 2 0 0 0 1 1 0 0 0 0 1 0 2 7 1 0 0 1 0 0 18 0 1793.785 Q9NTI5;A9IYQ1 Q9NTI5 1152 1169 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 0.0071049 59.227 By MS/MS By MS/MS 2 2 84805000 45086000 39719000 3747 2731 4149;4150 9369;9370;9371;9372 8597;8598 8597 360 5588;5589;5590;5591;5592 2 METVSNASSSSNPSSPGRIK QSQTKSSRMETVSNAS PSSPGRIKGRLDSSEM R M E I K G 1 1 2 0 0 0 1 1 0 1 0 1 1 0 2 7 1 0 0 1 0 0 20 1 2034.964 Q9NTI5;A9IYQ1 Q9NTI5 1152 1171 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2;3 4.2046E-08 85.808 By MS/MS By MS/MS 3 3 79723000 41113000 38610000 3748 2731 4151;4152 9373;9374;9375;9376;9377;9378 8599;8600;8601;8602 8601 5588;5589;5590;5591;5592 4 MEVDRSPGLPMSDLK GTEDAALRMEVDRSPG GLPMSDLKTHNVHVEI R M E L K T 0 1 0 2 0 0 1 1 0 0 2 1 2 0 2 2 0 0 0 1 0 0 15 1 1673.8117 Q6WCQ1;J3KSW8;H0Y2S9 Q6WCQ1 614 628 MPRIP Myosin phosphatase Rho-interacting protein yes no 3 0.0015069 67.252 By MS/MS By MS/MS 1 1 1460200 1460200 0 3749 2174 4153 9379;9380 8603;8604 8603 4346 2 MFLYADNEDR HLENYALKMFLYADNE LYADNEDRAGRFHKNM K M F D R A 1 1 1 2 0 0 1 0 0 0 1 0 1 1 0 0 0 0 1 0 0 0 10 0 1272.5445 Q5TGM0;A0A087WY55;Q9NP79 Q5TGM0 39 48 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 2 0.0097903 81.594 By MS/MS By MS/MS 1 1 1215300 0 1215300 3750 94 4154 9381;9382 8605;8606 8605 2 MFSAGPTGSASSSAR PPQGPRTRMFSAGPTG GSASSSARHLVPGPCS R M F A R H 3 1 0 0 0 0 0 2 0 0 0 0 1 1 1 5 1 0 0 0 0 0 15 0 1412.6354 O75385 O75385 773 787 ULK1 Serine/threonine-protein kinase ULK1 yes yes 2 0.0008165 83.633 By MS/MS By MS/MS 1 1 7843500 4715700 3127700 3751 1437 4155 9383;9384 8607;8608 8607 2646 2 MFSPMEEK EDSFFRQRMFSPMEEK MFSPMEEKELLSPLSE R M F E K E 0 0 0 0 0 0 2 0 0 0 0 1 2 1 1 1 0 0 0 0 0 0 8 0 997.42489 Q9UHB7 Q9UHB7 692 699 AFF4 AF4/FMR2 family member 4 yes yes 2 0.0069414 99.013 By MS/MS By MS/MS 1 1 5180800 2987400 2193300 3752 2813 4156 9385;9386 8609;8610 8609 5773 2 MFVSSSGLPPSPVPSPR SPTRGFGKMFVSSSGL PSPVPSPRRFSSRRSQ K M F P R R 0 1 0 0 0 0 0 1 0 0 1 0 1 1 5 5 0 0 0 2 0 0 17 0 1740.8869 G1UD79;Q7Z309 Q7Z309 146 162 SPACIA2;FAM122B Protein FAM122B no no 2 0.00012481 82.865 By MS/MS By MS/MS 4 3 21039000 12429000 8610000 3753 956;2208 4157;4158;4159 9387;9388;9389;9390;9391;9392;9393 8611;8612;8613;8614;8615;8616 8613 108 1736;1737 6 MGANSLER LERMGLERMGANSLER MGANSLERMGLERMGA R M G E R M 1 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 8 0 876.41235 A0A087X0X3;P52272;M0R2I7;M0QZM1;M0QY96 A0A087X0X3 571 578 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.0097361 89.679 By MS/MS By MS/MS 1 3 18909000 8323300 10585000 3754 135 4160;4161 9394;9395;9396;9397 8617;8618;8619 8617 241 3 MGAPESGLAEYLFDKHTLGDSDNES DHVTNLRKMGAPESGL LGDSDNES________ K M G E S - 2 0 1 3 0 0 3 3 1 0 3 1 1 1 1 3 1 0 1 0 0 0 25 1 2682.1755 G3V1D1;G3V192;P02794 G3V1D1 89 113 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes no 3 0.00019499 64.633 By MS/MS By matching 1 1 589950000 399290000 190660000 3755 957 4162 9398;9399 8620 8620 1739;1740;6482 1 MGESDDSILR AICGAIRRMGESDDSI ESDDSILRLAKADGIV R M G L R L 0 1 0 2 0 0 1 1 0 1 1 0 1 0 0 2 0 0 0 0 0 0 10 0 1121.5023 Q8WVC2;P63220 Q8WVC2 62 71 RPS21 40S ribosomal protein S21 yes no 2 0.0031115 96.034 By MS/MS By MS/MS 1 1 9838500 5404300 4434100 3756 1807 4163 9400;9401 8621;8622 8622 2 MGFGSISR KRKKKKEKMGFGSISR MGFGSISRVFARGKQR K M G S R V 0 1 0 0 0 0 0 2 0 1 0 0 1 1 0 2 0 0 0 0 0 0 8 0 853.41162 A0A1B0GWK2;Q674X7 A0A1B0GWK2 471 478 KAZN Kazrin yes no 2 0.013403 82.029 By MS/MS By MS/MS 1 1 3860200 2001700 1858500 3757 383 4164 9402;9403 8623;8624 8624 731 2 MGGAGGEGSDDDTSLT VAESREERMGGAGGEG SDDDTSLT________ R M G L T - 1 0 0 3 0 0 1 5 0 0 1 0 1 0 0 2 2 0 0 0 0 0 16 0 1468.5624 F5GY11;F5H8H3;Q9Y365 F5GY11 230 245 STARD10 PCTP-like protein yes no 2 0.00097958 78.964 By MS/MS By MS/MS 1 1 31522000 17160000 14362000 3758 861 4165 9404;9405 8625;8626 8626 1550 2 MGLLSPSGIGGVSPR PRALPPGRMGLLSPSG GIGGVSPRHALTSPSL R M G P R H 0 1 0 0 0 0 0 4 0 1 2 0 1 0 2 3 0 0 0 1 0 0 15 0 1426.7602 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 588 602 SAMD4B Protein Smaug homolog 2 yes no 2 0.00023915 97.223 By MS/MS By MS/MS 4 3 40579000 24629000 15950000 3759 1308 4166;4167;4168;4169 9406;9407;9408;9409;9410;9411;9412 8627;8628;8629;8630;8631;8632;8633;8634 8634 146 2347;2348 8 MGLSMER RMGPAIERMGLSMERM RMGLSMERMVPAGMGA R M G E R M 0 1 0 0 0 0 1 1 0 0 1 0 2 0 0 1 0 0 0 0 0 0 7 0 822.37279 A0A087X0X3;P52272;M0R2I7;M0QZM1 A0A087X0X3 525 531 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.030599 72.928 By MS/MS By matching 1 1 44811000 25789000 19023000 3760 135 4170 9413;9414 8635 8635 1 MGLVMDR RVGSEIERMGLVMDRM RMGLVMDRMGSVERMG R M G D R M 0 1 0 1 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 1 0 0 7 0 820.39353 A0A087X0X3;P52272;M0QZM1 A0A087X0X3 437 443 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.0081465 114.19 By matching By MS/MS 1 1 5106700 2653500 2453200 3761 135 4171 9415;9416 8636 8636 1 MGPTELLIEMEDWK DKISQLTRMGPTELLI LIEMEDWKGDKVKAHY R M G W K G 0 0 0 1 0 0 3 1 0 1 2 1 2 0 1 0 1 1 0 0 0 0 14 0 1690.7946 D6REL8;P02675 D6REL8 116 129 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 2 2.7865E-07 122.55 By MS/MS By MS/MS 1 1 7642100 3527000 4115100 3762 673 4172 9417;9418 8637;8638 8638 75 2 MGPVMDR GMGAGLERMGPVMDRM RMGPVMDRMATGLERM R M G D R M 0 1 0 1 0 0 0 1 0 0 0 0 2 0 1 0 0 0 0 1 0 0 7 0 804.36223 A0A087X0X3;P52272;M0R2I7;M0QZM1 A0A087X0X3 544 550 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.0096958 110.34 By matching By MS/MS 1 1 4390000 2450400 1939600 3763 135 4173 9419;9420 8639 8639 1 MGQAPSQSLLPPAQDQPRSPVPSAFSDQSR RAPSPSSRMGQAPSQS SAFSDQSRCLIAQTTP R M G S R C 3 2 0 2 0 5 0 1 0 0 2 0 1 1 6 6 0 0 0 1 0 0 30 1 3178.5466 Q9UQ35;I3L3Q8 Q9UQ35 2431 2460 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.00015899 65.118 By MS/MS By matching 2 2 193480000 98565000 94916000 3764 2877 4174;4175 9421;9422;9423;9424 8640;8641;8642 8640 376 5955 3 MGQKKTMGTER ________________ KKTMGTERSRGGKRGP - M G E R S 0 1 0 0 0 1 1 2 0 0 0 2 2 0 0 0 2 0 0 0 0 0 11 2 1265.622 A8MZ25 A8MZ25 1 11 Putative uncharacterized protein FLJ38767 yes yes 2 0.01729 43.442 By matching By MS/MS 1 1 2539800 1518800 1021000 3765 441 4176 9425;9426 8643 8643 50;51 1 MGSKSPGNTSQPPAFFSK GEQTEPSRMGSKSPGN QPPAFFSKLTESNSAM R M G S K L 1 0 1 0 0 1 0 2 0 0 0 2 1 2 3 4 1 0 0 0 0 0 18 1 1866.8934 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7;H7C184 C9JE98 2244 2261 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.0035302 67.418 By MS/MS By MS/MS 1 1 5882500 2960100 2922400 3766 552 4177 9427;9428 8644;8645 8645 1019 2 MGSSPLEVPKPR NHSDNFFRMGSSPLEV PLEVPKPRSVDHPLPG R M G P R S 0 1 0 0 0 0 1 1 0 0 1 1 1 0 3 2 0 0 0 1 0 0 12 1 1296.686 Q8NCE2 Q8NCE2 527 538 MTMR14 Myotubularin-related protein 14 yes yes 2 0.021404 63.091 By MS/MS By matching 1 1 6467100 3354500 3112600 3767 2336 4178 9429;9430 8646 8646 4683;4684 1 MHIEKDETPLSTPTAR DMGHESKRMHIEKDET PLSTPTARDSLDKLSL R M H A R D 1 1 0 1 0 0 2 0 1 1 1 1 1 0 2 1 3 0 0 0 0 0 16 1 1824.904 A0A087WZP2;Q9UI36 A0A087WZP2 571 586 DACH1 Dachshund homolog 1 yes no 2;3 0.0006332 77.124 By MS/MS By MS/MS 2 2 54788000 28773000 26015000 3768 114 4179 9431;9432;9433;9434 8647;8648;8649;8650 8648 207;6245;6246;6247 4 MHLRQYELL DCRDIIQRMHLRQYEL HLRQYELL________ R M H L L - 0 1 0 0 0 1 1 0 1 0 3 0 1 0 0 0 0 0 1 0 0 0 9 1 1201.6278 A0A0A0MR13;P63092;Q5JWF2 A0A0A0MR13 150 158 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 2 0.0099618 71.877 By matching By MS/MS 1 1 4426200 2195800 2230400 3769 169 4180 9435;9436 8651 8651 7191 1 MHSSNPKVRSSPSGNTQSSPK ________________ GNTQSSPKSKQEVMVR - M H P K S 0 1 2 0 0 1 0 1 1 0 0 2 1 0 3 7 1 0 0 1 0 0 21 2 2212.0655 O00512 O00512 1 21 BCL9 B-cell CLL/lymphoma 9 protein yes yes 3 0.028237 42.309 By MS/MS 1 0 0 0 3770 1335 4181 9437 8652 8652 1 MIFEGPNKLSPR VARDGPTKMIFEGPNK GPNKLSPRIDGPP___ K M I P R I 0 1 1 0 0 0 1 1 0 1 1 1 1 1 2 1 0 0 0 0 0 0 12 1 1387.7282 E9PKN0;E9PQ01;O94913 E9PKN0 768 779 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 2;3 0.004478 82.102 By MS/MS By MS/MS 2 2 21903000 12447000 9456400 3771 816 4182 9438;9439;9440;9441 8653;8654;8655;8656 8654 1459 4 MINLSVPDTIDER GDGIVLCKMINLSVPD VPDTIDERTINKKKLT K M I E R T 0 1 1 2 0 0 1 0 0 2 1 0 1 0 1 1 1 0 0 1 0 0 13 0 1501.7446 Q5TBN3;P13796;U3KQI3;A0A0A0MSQ0;P13797 Q5TBN3 166 178 LCP1;PLS3 Plastin-2;Plastin-3 no no 2 0.0024269 93.821 By MS/MS By MS/MS 2 1 6624200 4406400 2217800 3772 1576;221 4183;4184 9442;9443;9444 8657;8658;8659 8658 24 3 MIQIQENMAEQK YYFERNMRMIQIQENM QENMAEQKNIKDKLEN R M I Q K N 1 0 1 0 0 3 2 0 0 2 0 1 2 0 0 0 0 0 0 0 0 0 12 0 1461.6956 A0A0U1RRH6;O94880 A0A0U1RRH6 630 641 PHF14 PHD finger protein 14 yes no 2 0.020502 70.056 By MS/MS By matching 1 1 2479600 1172300 1307300 3773 351 4185 9445;9446 8660 8660 1 MISDAIPELK KVSSFEEKMISDAIPE SDAIPELKASIKKGED K M I L K A 1 0 0 1 0 0 1 0 0 2 1 1 1 0 1 1 0 0 0 0 0 0 10 0 1115.5896 P40926;G3XAL0 P40926 315 324 MDH2 Malate dehydrogenase, mitochondrial;Malate dehydrogenase yes no 2 0.010054 66.27 By MS/MS 1 0 0 0 3774 1688 4186 9447 8661 8661 209 1 MISTPSPK MDYDLELKMISTPSPK MISTPSPKKSMKMTMY K M I P K K 0 0 0 0 0 0 0 0 0 1 0 1 1 0 2 2 1 0 0 0 0 0 8 0 859.44734 Q53F19 Q53F19 410 417 C17orf85 Uncharacterized protein C17orf85 yes yes 2 0.0088743 91.701 By MS/MS By MS/MS 2 2 28732000 15783000 12949000 3775 2056 4187;4188 9448;9449;9450;9451 8662;8663;8664;8665;8666;8667 8665 4042;4043 6 MISTPSPKK MDYDLELKMISTPSPK ISTPSPKKSMKMTMYA K M I K K S 0 0 0 0 0 0 0 0 0 1 0 2 1 0 2 2 1 0 0 0 0 0 9 1 987.5423 Q53F19 Q53F19 410 418 C17orf85 Uncharacterized protein C17orf85 yes yes 2 0.011805 62.799 By MS/MS By MS/MS 2 1 5782600 1997200 3785400 3776 2056 4189;4190 9452;9453;9454 8668;8669;8670 8668 4042;4043 1 MIVKNYAYKPSK VQCMNLIKMIVKNYAY NYAYKPSKNFEDSSPE K M I S K N 1 0 1 0 0 0 0 0 0 1 0 3 1 0 1 1 0 0 2 1 0 0 12 2 1440.7799 F8WDV0;Q9UI26 F8WDV0 326 337 IPO11 Importin-11 yes no 2 0.020544 48.794 By MS/MS 1 672600 672600 0 3777 952 4191 9455 8671 8671 7419 0 MKDCEYQQISPGAAPLPASPGAR ________________ LPASPGARRPGPAASP - M K A R R 4 1 0 1 1 2 1 2 0 1 1 1 1 0 4 2 0 0 1 0 0 0 23 1 2443.1624 Q9NUE0 Q9NUE0 1 23 ZDHHC18 Palmitoyltransferase ZDHHC18 yes yes 3 0.018828 40.723 By MS/MS 1 10680000 10680000 0 3778 2735 4192 9456 8672 8672 7906 1 MKNGASDDQSGFSLHEFSVK M K V K 1 0 1 2 0 1 1 2 1 0 1 2 1 2 0 4 0 0 0 1 0 0 20 1 2182.9953 REV__E7EVM7 yes no 2 0.014797 40.577 By MS/MS By matching 1 1 9187700 5637600 3550100 + 3779 2973 4193 9457;9458 8673 8673 6157;6158;6159;6160 1 MKSEAVMNQFENSMR ISEKNELKMKSEAVMN NQFENSMRRVKEDTAA K M K M R R 1 1 2 0 0 1 2 0 0 0 0 1 3 1 0 2 0 0 0 1 0 0 15 1 1800.7957 Q5TB80 Q5TB80 1195 1209 CEP162 Centrosomal protein of 162 kDa yes yes 2 0.018657 43.958 By MS/MS By matching 1 1 7819900 2721300 5098600 3780 2107 4194 9459;9460 8674 8674 1 MKSLEQDALR RALWRAARMKSLEQDA SLEQDALRAQMVLSRS R M K L R A 1 1 0 1 0 1 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 10 1 1189.6125 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1425 1434 SCRIB Protein scribble homolog yes no 2;3 1.2737E-05 134.18 By MS/MS By MS/MS 3 3 121720000 68621000 53098000 3781 322 4195;4196 9461;9462;9463;9464;9465;9466 8675;8676;8677;8678;8679 8679 34 602 5 MLAESDESGDEESVSQTDK LAKAKAVKMLAESDES ESVSQTDKTELQNTLR K M L D K T 1 0 0 3 0 1 4 1 0 0 1 1 1 0 0 4 1 0 0 1 0 0 19 0 2055.8426 P22059 P22059 186 204 OSBP Oxysterol-binding protein 1 yes yes 2 0.021392 59.155 By MS/MS 1 0 0 0 3782 1616 4197 9467 8680 8680 2985;2986 1 MLAESDESGDEESVSQTDKTELQNTLR LAKAKAVKMLAESDES TELQNTLRTLSSKVED K M L L R T 1 1 1 3 0 2 5 1 0 0 3 1 1 0 0 4 3 0 0 1 0 0 27 1 3011.3513 P22059 P22059 186 212 OSBP Oxysterol-binding protein 1 yes yes 3 0.02616 42.322 By matching By MS/MS 1 1 207940000 92738000 115200000 3783 1616 4198 9468;9469 8681 8681 2985;2986 0 MLGEDSDEEEEMDTSER QQILLEKKMLGEDSDE EEMDTSERKINAGSQD K M L E R K 0 1 0 3 0 0 6 1 0 0 1 0 2 0 0 2 1 0 0 0 0 0 17 0 2000.7463 A0A087WWF4;A0A087X0M4;Q9BWU0;H7C256 A0A087WWF4 77 93 SLC4A1AP Kanadaptin yes no 3 0.024487 53.188 By MS/MS 1 0 0 0 3784 76 4199 9470 8682 8682 8;9 131 1 MLGEDSDEEEEMDTSERK QQILLEKKMLGEDSDE EMDTSERKINAGSQDD K M L R K I 0 1 0 3 0 0 6 1 0 0 1 1 2 0 0 2 1 0 0 0 0 0 18 1 2128.8413 A0A087WWF4;A0A087X0M4;Q9BWU0;H7C256 A0A087WWF4 77 94 SLC4A1AP Kanadaptin yes no 3 0.0010536 65.477 By MS/MS By MS/MS 1 1 16170000 7493400 8676600 3785 76 4200 9471;9472 8683;8684 8683 131 2 MLGMYVPDR ________________ LGMYVPDRFSLKSSRV - M L D R F 0 1 0 1 0 0 0 1 0 0 1 0 2 0 1 0 0 0 1 1 0 0 9 0 1080.5096 Q9NQX1 Q9NQX1 1 9 PRDM5 PR domain zinc finger protein 5 yes yes 2 0.022474 56.721 By MS/MS By MS/MS 1 1 50549000 22362000 28187000 3786 2714 4201 9473;9474 8685;8686;8687 8686 7903 3 MLGQKATPPPSPLLSELLK TDDSPQKKMLGQKATP PLLSELLKKGSLLPTS K M L L K K 1 0 0 0 0 1 1 1 0 0 5 2 1 0 4 2 1 0 0 0 0 0 19 1 2019.1438 H7C128;H7C179;H7C127 H7C128 249 267 BRD8 yes no 3 7.7664E-07 97.152 By MS/MS By MS/MS 2 3 32302000 18605000 13697000 3787 1165 4202;4203 9475;9476;9477;9478;9479 8688;8689;8690;8691;8692;8693 8689 136 2114;2115;6546 6 MLGQKATPPPSPLLSELLKK TDDSPQKKMLGQKATP LLSELLKKGSLLPTSP K M L K K G 1 0 0 0 0 1 1 1 0 0 5 3 1 0 4 2 1 0 0 0 0 0 20 2 2147.2388 H7C128;H7C179;H7C127 H7C128 249 268 BRD8 yes no 3 0.0044928 59.356 By matching By MS/MS 1 1 6648500 3755200 2893200 3788 1165 4204 9480;9481 8694 8694 136 2114;2115;6546 1 MLISAVSPEIR WTPTANLKMLISAVSP SAVSPEIRNRDQKRGL K M L I R N 1 1 0 0 0 0 1 0 0 2 1 0 1 0 1 2 0 0 0 1 0 0 11 0 1214.6693 E9PMT9;A0AVK6 E9PMT9 65 75 E2F8 Transcription factor E2F8 yes no 2 0.0019756 92.781 By MS/MS By MS/MS 1 1 3523200 2173100 1350000 3789 387 4205 9482;9483 8695;8696 8696 739 2 MLLSPGGVSQPLTASLAR GRRSQMLRMLLSPGGV PLTASLARQRIVEEER R M L A R Q 2 1 0 0 0 1 0 2 0 0 4 0 1 0 2 3 1 0 0 1 0 0 18 0 1796.9819 I3L0U5;Q6PK04 I3L0U5 239 256 CCDC137 Coiled-coil domain-containing protein 137 yes no 2 9.1388E-06 96.096 By MS/MS By MS/MS 2 1 8386100 5661200 2724900 3790 1196 4206;4207 9484;9485;9486 8697;8698;8699 8698 138 2175 3 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR QRLFENLRMLPHAPGV DEDDPDKRISICSSDK R M L K R I 3 1 0 6 0 2 5 2 1 2 1 1 2 0 5 1 0 0 0 1 0 0 33 1 3630.609 Q13547 Q13547 372 404 HDAC1 Histone deacetylase 1 yes yes 3;4 1.0516E-05 66.501 By MS/MS By MS/MS 7 7 919950000 377500000 542450000 3791 1925 4208;4209;4210 9487;9488;9489;9490;9491;9492;9493;9494;9495;9496;9497;9498;9499;9500 8700;8701;8702;8703;8704;8705;8706;8707;8708;8709;8710;8711;8712 8709 255;256 3716 13 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR QRLFENLRMLPHAPGV DGEDPDKRISIRASDK R M L K R I 3 1 0 6 0 2 4 3 2 1 1 1 2 0 4 1 0 0 0 2 0 0 33 1 3584.5784 Q92769 Q92769 373 405 HDAC2 Histone deacetylase 2 yes yes 3;4;5 2.1842E-11 79.993 By MS/MS By MS/MS 7 7 1214500000 623330000 591180000 3792 2436 4211;4212 9501;9502;9503;9504;9505;9506;9507;9508;9509;9510;9511;9512;9513;9514 8713;8714;8715;8716;8717;8718;8719;8720;8721;8722;8723;8724;8725;8726 8714 324;325 4903 14 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIR QRLFENLRMLPHAPGV PDKRISIRASDKRIAC R M L I R A 3 2 0 6 0 2 4 3 2 3 1 1 2 0 4 2 0 0 0 2 0 0 37 2 4053.8797 Q92769 Q92769 373 409 HDAC2 Histone deacetylase 2 yes yes 4;5 3.31E-09 73.936 By MS/MS By MS/MS 4 6 176660000 72641000 104020000 3793 2436 4213;4214 9515;9516;9517;9518;9519;9520;9521;9522;9523;9524 8727;8728;8729;8730;8731;8732;8733;8734;8735 8734 324;325 4903 9 MLQCLVTGHPRPQVRWTK ________________ RPQVRWTKTAGSASDK - M L T K T 0 2 0 0 1 2 0 1 1 0 2 1 1 0 2 0 2 1 0 2 0 0 18 2 2206.1616 D6RHU8;D6RFG6 D6RHU8 1 18 MDGA1 yes no 3 0.01281 42.806 By MS/MS By matching 1 1 6774900 3900300 2874600 3794 676 4215 9525;9526 8736 8736 76 1 MLQWLATKSPK RASGSSQRMLQWLATK WLATKSPKKEDSKTPQ R M L P K K 1 0 0 0 0 1 0 0 0 0 2 2 1 0 1 1 1 1 0 0 0 0 11 1 1301.7166 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 239 249 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein yes no 2 0.0042786 84.892 By MS/MS By MS/MS 1 1 7688500 3682200 4006400 3795 647 4216 9527;9528 8737;8738 8738 1164 2 MLSFQGLAELAHR DSTEPTKRMLSFQGLA GLAELAHREYQAGDFE R M L H R E 2 1 0 0 0 1 1 1 1 0 3 0 1 1 0 1 0 0 0 0 0 0 13 0 1471.7606 O15294;C9JZL3 O15294 18 30 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 2 0.004024 76.143 By MS/MS 1 3232000 3232000 0 3796 1364 4217 9529 8739 8739 2493 1 MLSQDAPTVK SKMEQKFRMLSQDAPT SQDAPTVKESCKTSSN R M L V K E 1 0 0 1 0 1 0 0 0 0 1 1 1 0 1 1 1 0 0 1 0 0 10 0 1088.5536 A0A0C4DG07;O60934 A0A0C4DG07 313 322 NBN Nibrin yes no 2 0.0017012 98.156 By MS/MS By MS/MS 1 1 14199000 8355200 5843400 3797 273 4218 9530;9531 8740;8741 8740 491 2 MLSSSDAITQEFMDLR KSPGKRRRMLSSSDAI TQEFMDLRTRYTALVT R M L L R T 1 1 0 2 0 1 1 0 0 1 2 0 2 1 0 3 1 0 0 0 0 0 16 0 1842.8492 H0Y390;H3BPE1;H3BQK9;Q9UPN3;E9PLY5;E9PNZ4 H0Y390 508 523 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 5.7355E-29 161.24 By MS/MS By MS/MS 3 3 31600000 20161000 11438000 3798 1011 4219;4220;4221 9532;9533;9534;9535;9536;9537 8742;8743;8744;8745;8746 8743 119;120 1861 5 MLWGSDPYPHAEPQQATTPK AISLSEPRMLWGSDPY PQQATTPKATEEPEDV R M L P K A 2 0 0 1 0 2 1 1 1 0 1 1 1 0 4 1 2 1 1 0 0 0 20 0 2253.0525 E7EPN9;Q9Y520 E7EPN9 807 826 PRRC2C Protein PRRC2C yes no 3 0.0018561 67.364 By MS/MS By MS/MS 2 1 18968000 12729000 6238900 3799 715 4222;4223 9538;9539;9540 8747;8748;8749;8750 8749 82 6418;6419;7357 4 MLYPRVWPYR LPFEVLLRMLYPRVWP YPRVWPYRMKVPQGFY R M L Y R M 0 2 0 0 0 0 0 0 0 0 1 0 1 0 2 0 0 1 2 1 0 0 10 1 1379.7172 C9JZ61;Q8N9V6 C9JZ61 424 433 ANKRD53 Ankyrin repeat domain-containing protein 53 yes no 3 0.030243 46.462 By MS/MS 1 2173100 0 2173100 3800 621 4224 9541 8751 8751 7329 0 MMASFQRSNSHDK ________________ QRSNSHDKVRRIVAEE - M M D K V 1 1 1 1 0 1 0 0 1 0 0 1 2 1 0 3 0 0 0 0 0 0 13 1 1537.6766 H3BPM0;H3BS25;Q9BY12;H3BPB0;H3BQF3;H3BQ61 H3BPM0 1 13 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum yes no 2 0.020461 50.088 By MS/MS By matching 1 1 4041500 1931000 2110400 3801 1125 4225 9542;9543 8752 8752 2054;2055 1 MMFVKSSGS KDAKSNYKMMFVKSSG MFVKSSGS________ K M M G S - 0 0 0 0 0 0 0 1 0 0 0 1 2 1 0 3 0 0 0 1 0 0 9 1 972.44087 O00193 O00193 175 183 SMAP Small acidic protein yes yes 2 0.0059246 87.789 By MS/MS By MS/MS 1 1 2614100 1309200 1304800 3802 1324 4226 9544;9545 8753;8754 8753 2387 2 MMSLSQSR DFGLSKWRMMSLSQSR MMSLSQSRSSKSAPEG R M M S R S 0 1 0 0 0 1 0 0 0 0 1 0 2 0 0 3 0 0 0 0 0 0 8 0 938.43137 O43353 O43353 172 179 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 2 0.02958 63.694 By MS/MS 1 1663800 1663800 0 3803 1380 4227 9546 8755 8755 1 MNAAVSFTNCALGR ________________ FTNCALGRVPWRKFPV - M N G R V 3 1 2 0 1 0 0 1 0 0 1 0 1 1 0 1 1 0 0 1 0 0 14 0 1510.7021 F6QWF9 F6QWF9 1 14 yes yes 2 0.029473 41.08 By MS/MS 1 0 0 0 3804 900 4228 9547 8756 8756 1 MNDFHISDDEEKNPSK ________________ DEEKNPSKLLFLKTNK - M N S K L 0 0 2 3 0 0 2 0 1 1 0 2 1 1 1 2 0 0 0 0 0 0 16 1 1904.8211 A8MSM7;A0A0C4DG83;A2VCS9;E7ETZ8;Q49MG5 A8MSM7 1 16 MAP9 Microtubule-associated protein 9 yes no 3 2.5479E-15 132.67 By MS/MS By matching 1 1 17730000 12511000 5219400 3805 284 4229 9548;9549 8757 8757 505 1 MNGVMFPGNSPSYTER NNSNSLNRMNGVMFPG NSPSYTERSNINGPGT R M N E R S 0 1 2 0 0 0 1 2 0 0 0 0 2 1 2 2 1 0 1 1 0 0 16 0 1785.7814 Q9NY27 Q9NY27 150 165 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 2 4.0493E-10 120.59 By MS/MS By MS/MS 5 5 97126000 57818000 39308000 3806 2754 4230;4231;4232;4233 9550;9551;9552;9553;9554;9555;9556;9557;9558;9559 8758;8759;8760;8761;8762;8763;8764;8765 8759 29 362 5629 8 MNILGSQSPLHPSTLSTVIHR AWRKRSTRMNILGSQS TLSTVIHRTQHWFHGR R M N H R T 0 1 1 0 0 1 0 1 2 2 3 0 1 0 2 4 2 0 0 1 0 0 21 0 2287.2107 Q13322 Q13322 469 489 GRB10 Growth factor receptor-bound protein 10 yes yes 3 0.0076383 49.306 By MS/MS By MS/MS 1 2 10461000 3433600 7027300 3807 1910 4234;4235 9560;9561;9562 8766;8767;8768 8768 3663;3664 3 MNPRPVMVSYPGSR AKVSQVPRMNPRPVMV MVSYPGSRRVCLFE__ R M N S R R 0 2 1 0 0 0 0 1 0 0 0 0 2 0 3 2 0 0 1 2 0 0 14 1 1589.7807 A0A0C4DG81 A0A0C4DG81 154 167 CLEC2D yes yes 3 0.012151 54.004 By matching By MS/MS 1 1 6671400 3023200 3648200 3808 283 4236 9563;9564 8769 8769 28 504 0 MNSLTFK KGKKVFERMNSLTFKK RMNSLTFKKSKDMRAK R M N F K K 0 0 1 0 0 0 0 0 0 0 1 1 1 1 0 1 1 0 0 0 0 0 7 0 839.42112 A0A1B0GWE0;Q96N67 Q96N67 1381 1387 DOCK7 Dedicator of cytokinesis protein 7 no no 2 0.010717 134.77 By MS/MS By MS/MS 1 1 30066000 15449000 14617000 3809 2519;381 4237 9565;9566 8770;8771 8771 727 2 MNSLTFKK KGKKVFERMNSLTFKK MNSLTFKKSKDMRAKL R M N K K S 0 0 1 0 0 0 0 0 0 0 1 2 1 1 0 1 1 0 0 0 0 0 8 1 967.51609 A0A1B0GWE0;Q96N67 Q96N67 1381 1388 DOCK7 Dedicator of cytokinesis protein 7 no no 2 0.0095427 91.469 By MS/MS By MS/MS 2 2 95540000 49041000 46499000 3810 2519;381 4238;4239 9567;9568;9569;9570 8772;8773;8774 8772 39 727 3 MNSQDSNTSVLEVVSEKPLSER ISSATVARMNSQDSNT SEKPLSERLKVVPGET R M N E R L 0 1 2 1 0 1 3 0 0 0 2 1 1 0 1 5 1 0 0 3 0 0 22 1 2448.1802 Q9UJA3 Q9UJA3 628 649 MCM8 DNA helicase MCM8 yes yes 3 4.9998E-09 90.968 By MS/MS By MS/MS 2 2 27207000 15473000 11734000 3811 2819 4240;4241 9571;9572;9573;9574 8775;8776;8777;8778 8777 368 5796;5797;7087 4 MNSTGGQTPR EQMPQRRRMNSTGGQT STGGQTPRRDLEKVLT R M N P R R 0 1 1 0 0 1 0 2 0 0 0 0 1 0 1 1 2 0 0 0 0 0 10 0 1047.4767 Q96ST2;A0A1B0GW95 Q96ST2 718 727 IWS1 Protein IWS1 homolog yes no 2 0.0025162 88.338 By MS/MS By MS/MS 3 3 26609000 16239000 10370000 3812 2541 4242;4243 9575;9576;9577;9578;9579;9580 8779;8780;8781;8782;8783;8784;8785 8781 5126 7 MNSYPYLADR PSSQRKVRMNSYPYLA SYPYLADRHYSREQRY R M N D R H 1 1 1 1 0 0 0 0 0 0 1 0 1 0 1 1 0 0 2 0 0 0 10 0 1228.5547 G3V1T9;J3KPD3;Q9Y580 G3V1T9 82 91 RBM7 RNA-binding protein 7 yes no 2 0.0055795 76.24 By MS/MS By MS/MS 2 2 17903000 9276000 8627100 3813 962 4244;4245 9581;9582;9583;9584 8786;8787;8788;8789;8790 8789 110 1752 5 MPCAEDYLSVVLNQLCVLHEK CKHPEAKRMPCAEDYL QLCVLHEKTPVSDRVT R M P E K T 1 0 1 1 2 1 2 0 1 0 4 1 1 0 1 1 0 0 1 3 0 0 21 0 2517.2066 CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;A0A0C4DGB6;C9JKR2;A0A087WWT3 CON__P02768-1 470 490 ALB Serum albumin yes no 3 1.5068E-26 136.49 By MS/MS By MS/MS 2 2 26127000 14971000 11156000 + 3814 633 4246;4247 9585;9586;9587;9588 8791;8792;8793;8794;8795 8793 71 5 MPCESSPPESADTPTSTR VAAGKTTKMPCESSPP ADTPTSTRRQPKTPLE K M P T R R 1 1 0 1 1 0 2 0 0 0 0 0 1 0 4 4 3 0 0 0 0 0 18 0 1948.8143 P46013 P46013 1371 1388 MKI67 Antigen KI-67 yes yes 2 7.5443E-09 112.57 By matching By MS/MS 1 1 19614000 3910600 15704000 3815 1704 4248 9589;9590 8796 8796 3148 1 MPCQSLQPEPINTPTHTK SEKGKITKMPCQSLQP INTPTHTKQQLKASLG K M P T K Q 0 0 1 0 1 2 1 0 1 1 1 1 1 0 4 1 3 0 0 0 0 0 18 0 2077.9925 P46013 P46013 1005 1022 MKI67 Antigen KI-67 yes yes 3 0.0022762 67.685 By MS/MS 1 3504100 3504100 0 3816 1704 4249 9591 8797 8797 6703 1 MPFLSISSPK KVKGSKFKMPFLSISS FLSISSPKVSMPDVEL K M P P K V 0 0 0 0 0 0 0 0 0 1 1 1 1 1 2 3 0 0 0 0 0 0 10 0 1105.5842 Q09666 Q09666 3405 3414 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0027087 85.963 By MS/MS By matching 1 1 2898500 1517700 1380800 3817 1871 4250 9592;9593 8798 8798 3544 1 MPGMSPANPSLHSPVPDASHSPR SGPSPAARMPGMSPAN PDASHSPRAGTSSQTM R M P P R A 2 1 1 1 0 0 0 1 2 0 1 0 2 0 6 5 0 0 0 1 0 0 23 0 2368.1052 H7C3E5;O60244 H7C3E5 23 45 MED14 Mediator of RNA polymerase II transcription subunit 14 yes no 3 0.0021364 54.658 By MS/MS By matching 2 2 15783000 8190400 7592600 3818 1180 4251;4252 9594;9595;9596;9597 8799;8800 8799 2141;2142;2143 2 MPIDLVIDDREGGSKSDSEDITR YISCLKGKMPIDLVID SDSEDITRSANLTDQP K M P T R S 0 2 0 5 0 0 2 2 0 3 1 1 1 0 1 3 1 0 0 1 0 0 23 2 2547.2123 E9PDC4;F5GYS8;H0YNY8;U3KPR8;O00470 E9PDC4 55 77 MEIS1 Homeobox protein Meis1 yes no 3 0.020871 45.237 By MS/MS By matching 1 1 10460000 6659900 3799900 3819 769 4253 9598;9599 8801 8801 1393 1 MPLDLSPLATPIIR ASEDDIKKMPLDLSPL PLATPIIRSKIEEPSV K M P I R S 1 1 0 1 0 0 0 0 0 2 3 0 1 0 3 1 1 0 0 0 0 0 14 0 1535.8745 E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336;C9JCI8 E9PEK8 107 120 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes no 2 7.1533E-05 114.21 By MS/MS By MS/MS 2 2 13285000 9398100 3887200 3820 534 4254;4255 9600;9601;9602;9603 8802;8803;8804;8805 8804 58 972 4 MPPLIADSPK GLKPHPERMPPLIADS PLIADSPKARCPLDAL R M P P K A 1 0 0 1 0 0 0 0 0 1 1 1 1 0 3 1 0 0 0 0 0 0 10 0 1067.5685 A0A087WXX9;P54646 A0A087WXX9 370 379 PRKAA2 5-AMP-activated protein kinase catalytic subunit alpha-2 yes no 2 2.674E-05 140.91 By MS/MS By MS/MS 1 1 7414600 3635100 3779500 3821 91 4256 9604;9605 8806;8807;8808;8809;8810 8807 170 5 MPQDGSDDEDEEWPTLEK RTTRLGPRMPQDGSDD EEWPTLEKAATMTAAG R M P E K A 0 0 0 4 0 1 4 1 0 0 1 1 1 0 2 1 1 1 0 0 0 0 18 0 2119.8528 F8WBL2;Q13895 F8WBL2 93 110 BYSL Bystin yes no 2;3 3.7427E-46 169.58 By MS/MS By MS/MS 4 4 500590000 271100000 229490000 3822 948 4257;4258 9606;9607;9608;9609;9610;9611;9612;9613 8811;8812;8813;8814;8815;8816;8817;8818;8819;8820;8821 8820 107 1719 11 MPSARPPSPPLSSWER EEAAPSDRMPSARPPS PPLSSWERVSRLMEED R M P E R V 1 2 0 0 0 0 1 0 0 0 1 0 1 0 5 4 0 1 0 0 0 0 16 1 1793.8883 O43896 O43896 908 923 KIF1C Kinesin-like protein KIF1C yes yes 3 0.0086991 54.598 By MS/MS By matching 1 1 4226200 2517700 1708500 3823 1398 4259 9614;9615 8822;8823 8822 2566 2 MPSQPLTDSMEDFYPNK DLPSLSKRMPSQPLTD MEDFYPNKNHGPDSGI R M P N K N 0 0 1 2 0 1 1 0 0 0 1 1 2 1 3 2 1 0 1 0 0 0 17 0 1998.8703 Q5VUJ6 Q5VUJ6 325 341 LRCH2 Leucine-rich repeat and calponin homology domain-containing protein 2 yes yes 3 0.028911 44.925 By MS/MS By matching 1 1 5589200 3207500 2381700 3824 2117 4260 9616;9617 8824 8824 0 MPVCSYFLKGICSNSNCPYSHVYVSRK SHHVSKEKMPVCSYFL SHVYVSRKAEVCSDFL K M P R K A 0 1 2 0 3 0 0 1 1 1 1 2 1 1 2 5 0 0 3 3 0 0 27 2 3252.4977 Q8IXZ2 Q8IXZ2 726 752 ZC3H3 Zinc finger CCCH domain-containing protein 3 yes yes 3 0.029801 40.682 By MS/MS 1 0 0 0 3825 2283 4261 9618 8825 8825 7789;7790 1 MQASIEKGGSLPK SVEDIKAKMQASIEKG EKGGSLPKVEAKFINY K M Q P K V 1 0 0 0 0 1 1 2 0 1 1 2 1 0 1 2 0 0 0 0 0 0 13 1 1344.7071 P06748 P06748 251 263 NPM1 Nucleophosmin yes yes 2;3 7.4185E-11 144.88 By MS/MS By MS/MS 3 3 61707000 34948000 26759000 3826 1533 4262;4263 9619;9620;9621;9622;9623;9624 8826;8827;8828;8829;8830 8829 182 2820 5 MQASIEKGGSLPKVEAK SVEDIKAKMQASIEKG SLPKVEAKFINYVKNC K M Q A K F 2 0 0 0 0 1 2 2 0 1 1 3 1 0 1 2 0 0 0 1 0 0 17 2 1771.9502 P06748 P06748 251 267 NPM1 Nucleophosmin yes yes 3 2.2003E-05 94.176 By matching By MS/MS 1 1 38368000 24519000 13849000 3827 1533 4264 9625;9626 8831 8831 2820 1 MQETLVGLELENER RKLGRQEKMQETLVGL GLELENERLLAKLQSW K M Q E R L 0 1 1 0 0 1 4 1 0 0 3 0 1 0 0 0 1 0 0 1 0 0 14 0 1659.8138 Q9Y6D9;C9JTA2 Q9Y6D9 296 309 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 3 0.0016338 68.944 By MS/MS By matching 1 1 9307100 4957700 4349300 3828 2946 4265 9627;9628 8832 8832 388 7138 1 MQFSFEGPEK RIVLSNMRMQFSFEGP FSFEGPEKVHSSYFEG R M Q E K V 0 0 0 0 0 1 2 1 0 0 0 1 1 2 1 1 0 0 0 0 0 0 10 0 1198.5329 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 163 172 IQSEC1 IQ motif and SEC7 domain-containing protein 1 no no 2 0.0034013 83.182 By MS/MS By MS/MS 1 1 5501000 2519200 2981800 3829 78;299 4266 9629;9630 8833;8834 8834 138 2 MQNNEELPTYEEAK MEKQLSPRMQNNEELP LPTYEEAKVQSQYFRG R M Q A K V 1 0 2 0 0 1 4 0 0 0 1 1 1 0 1 0 1 0 1 0 0 0 14 0 1694.7458 Q4VCS5 Q4VCS5 100 113 AMOT Angiomotin yes yes 2 2.2601E-89 212.82 By MS/MS By MS/MS 2 2 132710000 75200000 57505000 3830 2051 4267;4268 9631;9632;9633;9634 8835;8836;8837;8838 8836 275 6862;7736 3 MQNNEELPTYEEAKVQSQYFR MEKQLSPRMQNNEELP KVQSQYFRGQQHASVG R M Q F R G 1 1 2 0 0 3 4 0 0 0 1 1 1 1 1 1 1 0 2 1 0 0 21 1 2603.1962 Q4VCS5 Q4VCS5 100 120 AMOT Angiomotin yes yes 3 4.3497E-35 143.69 By MS/MS By MS/MS 2 2 200640000 114340000 86300000 3831 2051 4269;4270 9635;9636;9637;9638 8839;8840;8841;8842 8840 275 6862;7736 4 MQNNSSPSISPNTSFTSDGSPSPLGGIK RQAAYEMRMQNNSSPS PSPLGGIKRKAEDSDS R M Q I K R 0 0 3 1 0 1 0 3 0 2 1 1 1 1 4 8 2 0 0 0 0 0 28 0 2806.308 Q9H0D6 Q9H0D6 466 493 XRN2 5-3 exoribonuclease 2 yes yes 3 0.029789 40.094 By MS/MS By matching 1 1 9363500 4799100 4564400 3832 2626 4271 9639;9640 8843 8843 350 5333;5334;5335;5336;5337;5338;7040 1 MQNNSSPSISPNTSFTSDGSPSPLGGIKR RQAAYEMRMQNNSSPS SPLGGIKRKAEDSDSE R M Q K R K 0 1 3 1 0 1 0 3 0 2 1 1 1 1 4 8 2 0 0 0 0 0 29 1 2962.4091 Q9H0D6 Q9H0D6 466 494 XRN2 5-3 exoribonuclease 2 yes yes 3 1.0183E-12 86.551 By MS/MS By MS/MS 3 3 68394000 34544000 33850000 3833 2626 4272;4273;4274 9641;9642;9643;9644;9645;9646 8844;8845;8846;8847;8848;8849 8845 350 5333;5334;5335;5336;5337;5338;7040 6 MQNTLYLSLTR VLAVKSFRMQNTLYLS TLYLSLTRFIGDSRVM R M Q T R F 0 1 1 0 0 1 0 0 0 0 3 0 1 0 0 1 2 0 1 0 0 0 11 0 1338.6966 Q8N0V4 Q8N0V4 428 438 LGI2 Leucine-rich repeat LGI family member 2 yes yes 2 0.022779 43.442 By MS/MS 1 0 0 0 3834 2293 4275 9647 8850 8850 7792 1 MQSLQLDCVAVPSSR NENAVVKRMQSLQLDC CVAVPSSRSNSATEQP R M Q S R S 1 1 0 1 1 2 0 0 0 0 2 0 1 0 1 3 0 0 0 2 0 0 15 0 1689.8178 Q13546 Q13546 318 332 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 2 0.00022712 106.36 By MS/MS By MS/MS 1 1 15544000 7732800 7811000 3835 1924 4276 9648;9649 8851;8852 8851 3713 2 MQSLSLNK DATLSGKRMQSLSLNK MQSLSLNK________ R M Q N K - 0 0 1 0 0 1 0 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 8 0 919.4797 Q13442 Q13442 174 181 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 2 0.0043922 145.46 By MS/MS By MS/MS 3 3 181220000 95656000 85560000 3836 1916 4277;4278 9650;9651;9652;9653;9654;9655 8853;8854;8855;8856;8857;8858 8853 253 3693;3694 6 MQTKGAMDLLTMK M Q M K 1 0 0 1 0 1 0 1 0 0 2 2 3 0 0 0 2 0 0 0 0 0 13 1 1466.7295 REV__Q9UIG0 yes yes 2 0.0021907 74.841 By MS/MS 1 15254000 0 15254000 + 3837 3011 4279 9656 8859 8859 393 7150;7151 1 MREDYDSVEQDGDEPGPQR SEEGSRARMREDYDSV GDEPGPQRSVEGWILF R M R Q R S 0 2 0 4 0 2 3 2 0 0 0 0 1 0 2 1 0 0 1 1 0 0 19 1 2221.9182 Q9Y5S9 Q9Y5S9 50 68 RBM8A RNA-binding protein 8A yes yes 3 1.5992E-06 95.834 By MS/MS By MS/MS 2 2 40159000 21349000 18810000 3838 2935 4280;4281 9657;9658;9659;9660 8860;8861;8862 8862 6100 3 MRIPNYQLSPTKLPSINK MVSNTLAKMRIPNYQL TKLPSINKSKDRASQQ K M R N K S 0 1 2 0 0 1 0 0 0 2 2 2 1 0 3 2 1 0 1 0 0 0 18 2 2099.1561 A0A0C4DG07;O60934 A0A0C4DG07 342 359 NBN Nibrin yes no 3 0.014426 50.376 By matching By MS/MS 1 1 8284100 4771100 3513000 3839 273 4282 9661;9662 8863 8863 490;6298;7220 1 MRPGEATLSC GPDGHAKKMRPGEATL PGEATLSC________ K M R S C - 1 1 0 0 1 0 1 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 10 1 1120.5005 P57081 P57081 403 412 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 2 0.0025598 92.866 By MS/MS 1 2082600 2082600 0 3840 1780 4283 9663 8864 8864 3353 1 MSADMSEIEAR PPTSEGKRMSADMSEI DMSEIEARIAATTGNG R M S A R I 2 1 0 1 0 0 2 0 0 1 0 0 2 0 0 2 0 0 0 0 0 0 11 0 1238.5271 Q9UG54;O43318 Q9UG54 69 79 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 2 7.5241E-06 124.38 By MS/MS By MS/MS 1 1 15973000 9270600 6702300 3841 1379 4284 9664;9665 8865;8866 8865 2524 2 MSCFSRPSMSPTPLDR PVALNSSRMSCFSRPS MSPTPLDRCRSPGMLE R M S D R C 0 2 0 1 1 0 0 0 0 0 1 0 2 1 3 4 1 0 0 0 0 0 16 1 1867.8379 Q9UQ35 Q9UQ35 2114 2129 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.0048603 54.598 By matching By MS/MS 1 3 16259000 3238800 13020000 3842 2877 4285;4286;4287 9666;9667;9668;9669 8867;8868;8869 8868 377 5956;5957;7107 3 MSDTGSPGMQR IYELSLCKMSDTGSPG TGSPGMQRRRRKILDT K M S Q R R 0 1 0 1 0 1 0 2 0 0 0 0 2 0 1 2 1 0 0 0 0 0 11 0 1165.4856 A0A087WWA3;Q4R9M9;O60333;A0A0U1RQL3 A0A087WWA3 1423 1433 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B yes no 2 0.0020715 92.19 By MS/MS By MS/MS 1 2 5926800 2087500 3839300 3843 74 4288 9670;9671;9672 8870;8871;8872;8873 8871 127 4 MSGFIYQGK LMLSASPRMSGFIYQG SGFIYQGKLPTTGMTI R M S G K L 0 0 0 0 0 1 0 2 0 1 0 1 1 1 0 1 0 0 1 0 0 0 9 0 1029.4954 B1ALK7;Q14155;E9PDQ5;E7EUY6;F6SJA5;Q15052 B1ALK7 339 347 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 yes no 2 0.0056585 82.494 By MS/MS By MS/MS 2 2 71903000 38966000 32937000 3844 462 4289;4290 9673;9674;9675;9676 8874;8875;8876 8875 52 890 3 MSGFIYQGKLPTTGMTITK LMLSASPRMSGFIYQG TTGMTITKLEDSENHR R M S T K L 0 0 0 0 0 1 0 3 0 2 1 2 2 1 1 1 4 0 1 0 0 0 19 1 2073.0639 B1ALK7;Q14155;E9PDQ5;E7EUY6;F6SJA5 B1ALK7 339 357 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes no 3 0.0024225 62.064 By MS/MS By matching 1 1 4990500 3183200 1807300 3845 462 4291 9677;9678 8877 8877 890 1 MSLEEIKNRQNAAR ________________ KNRQNAARNNSPPTVG - M S A R N 2 2 2 0 0 1 2 0 0 1 1 1 1 0 0 1 0 0 0 0 0 0 14 2 1658.8522 F5H1D4 F5H1D4 1 14 ANKLE2 yes yes 2 0.02844 43.512 By MS/MS 1 0 0 0 3846 876 4292 9679 8878 8878 1 MSLSPSSPR EMSARIAKMSLSPSSP SLSPSSPRHEDQLEVT K M S P R H 0 1 0 0 0 0 0 0 0 0 1 0 1 0 2 4 0 0 0 0 0 0 9 0 960.46987 F5H1D4;Q86XL3 Q86XL3 801 809 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 no no 2 0.0027603 112.36 By MS/MS By MS/MS 1 1 4602800 2541700 2061100 3847 2252;876 4293 9680;9681 8879;8880 8879 1571;1572 2 MSPMGTASGSNSPTSDSASVQR QRQQNSGRMSPMGTAS SDSASVQRADTSLNNC R M S Q R A 2 1 1 1 0 1 0 2 0 0 0 0 2 0 2 7 2 0 0 1 0 0 22 0 2153.9317 Q5QPB1;O76080 Q5QPB1 99 120 ZFAND5 AN1-type zinc finger protein 5 yes no 2;3 2.5656E-06 84.499 By MS/MS By matching 2 2 28149000 17570000 10579000 3848 1456 4294 9682;9683;9684;9685 8881;8882;8883 8882 2692 3 MSPNETLFLESTNK IQKVVFHKMSPNETLF LFLESTNKIYKDDISN K M S N K I 0 0 2 0 0 0 2 0 0 0 2 1 1 1 1 2 2 0 0 0 0 0 14 0 1609.7658 Q9HB90;Q9NQL2 Q9HB90 85 98 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 2 0.0043215 91.592 By MS/MS By MS/MS 1 1 13558000 7241000 6317200 3849 2687 4295 9686;9687 8884;8885 8885 7055 2 MSPSKSPFLPSMK FQRSLENRMSPSKSPF SPFLPSMKMQKVMPTV R M S M K M 0 0 0 0 0 0 0 0 0 0 1 2 2 1 3 4 0 0 0 0 0 0 13 1 1435.7203 A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;Q8NFD5 A0A1B0GV63 674 686 ARID1B AT-rich interactive domain-containing protein 1B yes no 3 0.00063254 96.435 By MS/MS By matching 1 1 3792000 2376100 1415900 3850 363 4296 9688;9689 8886 8886 674 1 MSQEEVNVFRLEMEGITVK VEVPELAKMSQEEVNV EMEGITVKGKGCPKPI K M S V K G 0 1 1 0 0 1 4 1 0 1 1 1 2 1 0 1 1 0 0 3 0 0 19 1 2238.1024 D6RJA6;A0A0C4DG89;Q7L014 D6RJA6 297 315 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 3 0.015512 40.962 By MS/MS 1 2680100 2680100 0 3851 286 4297 9690 8887 8887 29 1 MSQPGSPSPK AEVEENKKMSQPGSPS QPGSPSPKTPTPSTPG K M S P K T 0 0 0 0 0 1 0 1 0 0 0 1 1 0 3 3 0 0 0 0 0 0 10 0 1014.4804 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 1523 1532 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0038545 81.676 By MS/MS By MS/MS 2 1 58512000 36047000 22466000 3852 292 4298;4299 9691;9692;9693 8888;8889;8890;8891;8892;8893 8891 30 520;521 6 MSSEGPPRMSPK PVSTMPKRMSSEGPPR GPPRMSPKAQRHPRNH R M S P K A 0 1 0 0 0 0 1 1 0 0 0 1 2 0 3 3 0 0 0 0 0 0 12 1 1302.606 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700;F8W0B5 H0YH87 536 547 ATXN2 Ataxin-2 no no 2 0.0013893 101.75 By MS/MS By MS/MS 2 2 28458000 15181000 13277000 3853 912;929 4300;4301 9694;9695;9696;9697 8894;8895 8895 1641 2 MSSHTETSSFLQTLTGR AMDRSCNRMSSHTETS FLQTLTGRLPTKKLFH R M S G R L 0 1 0 0 0 1 1 1 1 0 2 0 1 1 0 4 4 0 0 0 0 0 17 0 1881.8891 A0A1B0GWE0;Q96N67 Q96N67 962 978 DOCK7 Dedicator of cytokinesis protein 7 no no 3 2.2152E-05 96.247 By MS/MS By MS/MS 2 2 6523000 3640700 2882300 3854 2519;381 4302;4303 9698;9699;9700;9701 8896;8897;8898;8899 8896 40 728;729;6320;6321 4 MSSPLADAK RILQSLEKMSSPLADA SSPLADAKRIPSIVSS K M S A K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 1 2 0 0 0 0 0 0 9 0 918.44807 P49790 P49790 318 326 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.015269 67.93 By matching By MS/MS 1 1 7461500 4642300 2819100 3855 1729 4304 9702;9703 8900 8900 3252 1 MTGSAPPPSPTPNK GCQTSRTKMTGSAPPP PPSPTPNKEMKNKAVL K M T N K E 1 0 1 0 0 0 0 1 0 0 0 1 1 0 5 2 2 0 0 0 0 0 14 0 1380.6708 Q9UBW7 Q9UBW7 830 843 ZMYM2 Zinc finger MYM-type protein 2 yes yes 2 0.027795 67.136 By MS/MS 1 0 0 0 3856 2804 4305 9704 8901 8901 1 MTLIPSPNSPFQK STPNSPVKMTLIPSPN SPNSPFQKVGKLASSD K M T Q K V 0 0 1 0 0 1 0 0 0 1 1 1 1 1 3 2 1 0 0 0 0 0 13 0 1458.7541 Q96AY4;A0A087WW06 Q96AY4 2112 2124 TTC28 Tetratricopeptide repeat protein 28 yes no 2 0.0028087 82.749 By MS/MS By MS/MS 1 1 2634900 1444900 1189900 3857 2459 4306 9705;9706 8902;8903 8902 4954 1 MTMSSLVER SALKPSDRMTMSSLVE TMSSLVERACCRDYQR R M T E R A 0 1 0 0 0 0 1 0 0 0 1 0 2 0 0 2 1 0 0 1 0 0 9 0 1052.4995 G5E933;O95248 G5E933 1117 1125 SBF1 Myotubularin-related protein 5 yes no 2 0.0017751 133.89 By MS/MS By MS/MS 1 1 2476200 1336600 1139600 3858 988 4307 9707;9708 8904;8905 8904 1801 2 MTNNEDSLSPTSSTLSNLELDAAEKDR FLSSSPLRMTNNEDSL LDAAEKDRKLQEKEKQ R M T D R K 2 1 3 3 0 0 3 0 0 0 4 1 1 0 1 5 3 0 0 0 0 0 27 1 2937.3509 Q9ULH7 Q9ULH7 535 561 MKL2 MKL/myocardin-like protein 2 yes yes 3 0.0011993 51.554 By MS/MS By MS/MS 1 2 12327000 4338100 7988900 3859 2845 4308;4309 9709;9710;9711 8906;8907 8906 370 5850;7093 2 MTSERAPSPSSR PSAPSQSRMTSERAPS RAPSPSSRMGQAPSQS R M T S R M 1 2 0 0 0 0 1 0 0 0 0 0 1 0 2 4 1 0 0 0 0 0 12 1 1304.6143 Q9UQ35;I3L3Q8 Q9UQ35 2419 2430 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.012342 71.888 By MS/MS By MS/MS 2 2 69056000 23543000 45512000 3860 2877 4310;4311 9712;9713;9714;9715 8908;8909 8909 378 5958;5959 2 MVCSPVTVR ________________ VCSPVTVRIAPPDRRF - M V V R I 0 1 0 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 3 0 0 9 0 1047.5205 A0A087WY75;A0A075B7F8;A8CG34;A8MY32;Q96HA1 A0A087WY75 1 9 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 no no 2 0.0023336 113.93 By MS/MS By MS/MS 2 2 14590000 9154000 5436200 3861 18;2498 4312;4313 9716;9717;9718;9719 8910;8911;8912;8913 8910 3 38 4 MVEPENAVTITPLRPEDDYSPR QMRVWRERMVEPENAV PEDDYSPRERRGGGLR R M V P R E 1 2 1 2 0 0 3 0 0 1 1 0 1 0 4 1 2 0 1 2 0 0 22 1 2528.2217 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YDF9 A0A0G2JMS7 735 756 SCRIB Protein scribble homolog yes no 3 0.00011023 74.222 By MS/MS By MS/MS 1 1 56884000 31105000 25779000 3862 322 4314 9720;9721 8914;8915 8914 603;6306 2 MVEPENAVTITPLRPEDDYSPRER QMRVWRERMVEPENAV DDYSPRERRGGGLRLP R M V E R R 1 3 1 2 0 0 4 0 0 1 1 0 1 0 4 1 2 0 1 2 0 0 24 2 2813.3654 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YDF9 A0A0G2JMS7 735 758 SCRIB Protein scribble homolog yes no 3 0.0059351 56.055 By MS/MS 1 12348000 12348000 0 3863 322 4315 9722 8916 8916 603;6306 1 MVIQGPSSPQGEAMVTDVLEDQKEGR PVSPASQKMVIQGPSS LEDQKEGRSTNKENPS K M V G R S 1 1 0 2 0 3 3 3 0 1 1 1 2 0 2 2 1 0 0 3 0 0 26 1 2800.3371 Q12888;A6NNK5 Q12888 1107 1132 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 4.8511E-22 104.97 By MS/MS By MS/MS 3 3 216370000 129660000 86704000 3864 1882 4316;4317;4318 9723;9724;9725;9726;9727;9728 8917;8918;8919;8920;8921;8922 8921 244;245 3576;3577 6 MVKQPCPSESDIITEEDKSK PKPRGRPKMVKQPCPS ITEEDKSKKKGQEEKQ K M V S K K 0 0 0 2 1 1 3 0 0 2 0 3 1 0 2 3 1 0 0 1 0 0 20 2 2320.0927 O75475 O75475 199 218 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 0.00076171 71.929 By MS/MS By MS/MS 1 1 10429000 5401800 5027500 3865 1440 4319 9729;9730 8923;8924 8924 2657 2 MVSQSQPGSR SRGRSRTKMVSQSQPG SQSQPGSRSGSPGRVL K M V S R S 0 1 0 0 0 2 0 1 0 0 0 0 1 0 1 3 0 0 0 1 0 0 10 0 1075.508 E3W994;J3KR49;O75122;E7ERI8;E7EW49 E3W994 451 460 CLASP2 CLIP-associating protein 2 yes no 2 3.3639E-16 126.31 By MS/MS By MS/MS 1 1 12524000 7586500 4937300 3866 690 4320 9731;9732 8925;8926 8926 1221;1222;1223 1 MVSQSQPGSRSGSPGRVLTTTALSTVSSGVQR SRGRSRTKMVSQSQPG TVSSGVQRVLVNSASA K M V Q R V 1 3 0 0 0 3 0 4 0 0 2 0 1 0 2 8 4 0 0 4 0 0 32 2 3217.6473 E3W994;J3KR49;O75122;E7ERI8;E7EW49 E3W994 451 482 CLASP2 CLIP-associating protein 2 yes no 4 0.00047314 50.757 By matching By MS/MS 1 1 8514000 4377500 4136500 3867 690 4321 9733;9734 8927 8927 79 1221;1222;1223;1224;1225;6404;6405 1 MVTGNGSLKR KVARKRKRMVTGNGSL TGNGSLKRKSSRKETP R M V K R K 0 1 1 0 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 1 0 0 10 1 1061.5652 P52701;A0A087WWJ1 P52701 303 312 MSH6 DNA mismatch repair protein Msh6 yes no 2 0.0049089 83.045 By MS/MS By matching 1 1 3328800 2114900 1213900 3868 1754 4322 9735;9736 8928 8928 3313 1 MVVESAYEVIK ENWKEVHKMVVESAYE ESAYEVIKLKGYTNWA K M V I K L 1 0 0 0 0 0 2 0 0 1 0 1 1 0 0 1 0 0 1 3 0 0 11 0 1266.653 P07195 P07195 234 244 LDHB L-lactate dehydrogenase B chain yes yes 2 0.0021761 100.02 By MS/MS By MS/MS 1 1 4841400 3052500 1788900 3869 1535 4323 9737;9738 8929;8930 8929 2 MYDAAKLLYNNVSNFGR GDRCYDEKMYDAAKLL NNVSNFGRLASTLVHL K M Y G R L 2 1 3 1 0 0 0 1 0 0 2 1 1 1 0 1 0 0 2 1 0 0 17 1 1974.9622 A0A087WVQ6;Q00610;J3KS13 A0A087WVQ6 1214 1230 CLTC Clathrin heavy chain;Clathrin heavy chain 1 yes no 2 0.019658 47.062 By matching By MS/MS 1 1 5008200 3383400 1624800 3870 65 4324 9739;9740 8931 8931 113 1 MYFAETVLALEYLHNYGIVHRDLK PLPVDMARMYFAETVL GIVHRDLKPDNLLVTS R M Y L K P 2 1 1 1 0 0 2 1 2 1 4 1 1 1 0 0 1 0 3 2 0 0 24 1 2894.4789 J3QT34;O15021 J3QT34 672 695 MAST4 Microtubule-associated serine/threonine-protein kinase 4 no no 3 0.029427 41.615 By MS/MS 1 0 0 0 3871 1261 4325 9741 8932 8932 1 MYLGYEYVTAIR VPPRMDAKMYLGYEYV YEYVTAIRNLREGTCP K M Y I R N 1 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 1 0 3 1 0 0 12 0 1477.7275 P02787 P02787 332 343 TF Serotransferrin yes yes 2 0.0082078 83 By MS/MS 1 0 0 0 3872 1520 4326 9742 8933 8933 1 MYPPRSPK PPPPAVGRMYPPRSPK MYPPRSPKSAAPAPIS R M Y P K S 0 1 0 0 0 0 0 0 0 0 0 1 1 0 3 1 0 0 1 0 0 0 8 1 974.50077 Q8WWM7;H3BUF6 Q8WWM7 444 451 ATXN2L Ataxin-2-like protein yes no 2;3 0.0058992 83.753 By MS/MS By MS/MS 2 2 114550000 62651000 51900000 3873 2409 4327 9743;9744;9745;9746 8934;8935;8936;8937;8938;8939 8939 4825 6 MYVDPSEINPSMPQR NSLYDVSRMYVDPSEI INPSMPQRTVKALYDY R M Y Q R T 0 1 1 1 0 1 1 0 0 1 0 0 2 0 3 2 0 0 1 1 0 0 15 0 1762.8018 A0A0A0MRF9;P16885 A0A0A0MRF9 758 772 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 2 0.021732 51.252 By MS/MS By matching 1 1 10830000 5096200 5733300 3874 183 4328 9747;9748 8940 8940 7196 0 NAASFPLRSPQPVCSPAGSEGTPK DGDSSTMRNAASFPLR AGSEGTPKGSRPPLIL R N A P K G 3 1 1 0 1 1 1 2 0 0 1 1 0 1 5 4 1 0 0 1 0 0 24 1 2454.1962 Q6KC79 Q6KC79 266 289 NIPBL Nipped-B-like protein yes yes 3 1.5493E-25 120.75 By MS/MS By MS/MS 2 2 31067000 15037000 16030000 3875 2147 4329;4330 9749;9750;9751;9752 8941;8942;8943;8944;8945;8946;8947 8944 4270;4271 6 NADSQEDAEELKATTR RMRVLSFRNADSQEDA EELKATTRGQAGLPGG R N A T R G 3 1 1 2 0 1 3 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 16 1 1776.8126 Q9P266 Q9P266 1278 1293 KIAA1462 Junctional protein associated with coronary artery disease yes yes 2 0.02396 54.65 By matching By MS/MS 1 1 5866700 2982200 2884600 3876 2784 4331 9753;9754 8948 8948 1 NAEAVLQSPGLSGK VLTVDYTRNAEAVLQS QSPGLSGKVKRDAEKK R N A G K V 2 0 1 0 0 1 1 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1369.7201 Q13045 Q13045 849 862 FLII Protein flightless-1 homolog yes yes 2 5.0901E-14 140.96 By MS/MS By MS/MS 1 1 35328000 16527000 18801000 3877 1894 4332 9755;9756 8949;8950;8951 8950 3615 3 NAEDCLYELPENIR EEQKVKPKNAEDCLYE YELPENIRVSSAKKTE K N A I R V 1 1 2 1 1 0 3 0 0 1 2 0 0 0 1 0 0 0 1 0 0 0 14 0 1734.7883 Q9NZ63 Q9NZ63 141 154 C9orf78 Uncharacterized protein C9orf78 yes yes 2;3 4.9078E-21 160.56 By MS/MS By MS/MS 2 2 76243000 40392000 35851000 3878 2764 4333 9757;9758;9759;9760 8952;8953;8954;8955 8954 7918 4 NAGNEQDLGIQYK EDGILKLRNAGNEQDL QDLGIQYKALKPEVDK R N A Y K A 1 0 2 1 0 2 1 2 0 1 1 1 0 0 0 0 0 0 1 0 0 0 13 0 1448.6896 G3XAM7;P35221;E5RJ41;E5RIB1 G3XAM7 166 178 CTNNA1 Catenin alpha-1 yes no 2 0.00093166 91.658 By MS/MS By MS/MS 1 1 4009000 2161900 1847100 3879 986 4334 9761;9762 8956;8957 8957 7425 2 NAGVEGSLIVEK IPAMTIAKNAGVEGSL EGSLIVEKIMQSSSEV K N A E K I 1 0 1 0 0 0 2 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 12 0 1214.6507 P10809 P10809 482 493 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0059164 82.494 By MS/MS By matching 1 1 3666200 2258700 1407500 3880 1557 4335 9763;9764 8958 8958 1 NAIKVPIVINPNAYDNLAIYK PTYARSSKNAIKVPIV YDNLAIYKSFLGTSGE K N A Y K S 3 0 4 1 0 0 0 0 0 4 1 2 0 0 2 0 0 0 2 2 0 0 21 1 2342.2998 H0YN99;Q9H792;H3BUZ5 H0YN99 622 642 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 3 0.0029699 52.045 By MS/MS 1 2242300 2242300 0 3881 1102 4336 9765 8959;8960 8959 7455;7456 2 NAISLPQLNQAAYDSLVVGK PAISPIIKNAISLPQL YDSLVVGKLSFDSSPT K N A G K L 3 0 2 1 0 2 0 1 0 1 3 1 0 0 1 2 0 0 1 2 0 0 20 0 2100.1215 Q00587 Q00587 118 137 CDC42EP1 Cdc42 effector protein 1 yes yes 2;3 4.0518E-13 113.54 By MS/MS By MS/MS 3 1 41069000 36283000 4786100 3882 1825 4337;4338 9766;9767;9768;9769 8961;8962;8963;8964 8961 3415;3416;7662 4 NALASKMLYEFILER QAALEGIKNALASKML LYEFILERRMTLTDSI K N A E R R 2 1 1 0 0 0 2 0 0 1 3 1 1 1 0 1 0 0 1 0 0 0 15 1 1796.9495 E9PMY4;C9JNM6;C9JA65;O00458 E9PMY4 58 72 IFRD1 Interferon-related developmental regulator 1 yes no 3 0.0093182 50.897 By MS/MS 1 453530000 453530000 0 3883 577 4339 9770 8965 8965 62 1 NALKQETEVELYNEFPEPIK QAFQTIARNALKQETE NEFPEPIKLDKNDRAK R N A I K L 1 0 2 0 0 1 5 0 0 1 2 2 0 1 2 0 1 0 1 1 0 0 20 1 2390.2006 C9J8S3;P51149;C9J4S4;C9J4V0 C9J8S3 125 144 RAB7A Ras-related protein Rab-7a yes no 3 0.023762 40.622 By MS/MS 1 2385000 2385000 0 3884 571 4340 9771 8966 8966 7317 1 NALPPVLTTVNGQSPPEHSAPAK PKVNPWTKNALPPVLT PEHSAPAKVVRAAVPK K N A A K V 3 0 2 0 0 1 1 1 1 0 2 1 0 0 5 2 2 0 0 2 0 0 23 0 2324.2125 Q6PKG0;A0A0B4J210;H0YBM7 Q6PKG0 130 152 LARP1 La-related protein 1 yes no 3 0.00027719 66.906 By MS/MS By MS/MS 3 3 91530000 55695000 35835000 3885 2162 4341;4342 9772;9773;9774;9775;9776;9777 8967;8968;8969;8970;8971;8972;8973;8974;8975;8976;8977 8970 4311;4312;6912;6913 11 NALPPVLTTVNGQSPPEHSAPAKVVR PKVNPWTKNALPPVLT SAPAKVVRAAVPKQRK K N A V R A 3 1 2 0 0 1 1 1 1 0 2 1 0 0 5 2 2 0 0 4 0 0 26 1 2678.4504 Q6PKG0;A0A0B4J210;H0YBM7 Q6PKG0 130 155 LARP1 La-related protein 1 yes no 3 0.0028645 51.568 By MS/MS By MS/MS 1 1 26173000 12488000 13685000 3886 2162 4343 9778;9779 8978;8979 8978 4311;4312;6912;6913 2 NAMSLPQLNEK RDSALFVKNAMSLPQL SLPQLNEKEAAEKGTS K N A E K E 1 0 2 0 0 1 1 0 0 0 2 1 1 0 1 1 0 0 0 0 0 0 11 0 1243.6231 Q9H3Q1;J3KRZ9 Q9H3Q1 115 125 CDC42EP4 Cdc42 effector protein 4 yes no 2 0.028582 58.098 By MS/MS 1 1050300 1050300 0 3887 2654 4344 9780 8980 8980 1 NAPAAVDEGSISPR NRRQARGRNAPAAVDE DEGSISPRTLSAIKRA R N A P R T 3 1 1 1 0 0 1 1 0 1 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1382.679 R4GMW8;P28715 R4GMW8 799 812 BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells yes no 2 0.0014061 85.28 By MS/MS By MS/MS 1 1 53071000 28917000 24154000 3888 1642 4345 9781;9782 8981;8982 8981 3031;3032 2 NASASFQELEDK AFVKRRNRNASASFQE SFQELEDKKELSEESE R N A D K K 2 0 1 1 0 1 2 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 12 0 1337.6099 F2Z3H0;F2Z3N9;H7C3L7;Q99543 F2Z3H0 45 56 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 2 0.019633 60.901 By matching By MS/MS 1 1 3211000 1525000 1685900 3889 855 4346 9783;9784 8983 8983 1543 1 NASSYKATTR SCAAAAQRNASSYKAT SSYKATTRAFPRVTPT R N A T R A 2 1 1 0 0 0 0 0 0 0 0 1 0 0 0 2 2 0 1 0 0 0 10 1 1097.5465 Q14573 Q14573 1565 1574 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 yes yes 3 0.026843 41.704 By MS/MS By MS/MS 1 1 4392300 2421500 1970800 3890 1948 4347 9785;9786 8984;8985 8984 7705 0 NASTFEDVTQVSSAYQK VQKDRMDKNASTFEDV QVSSAYQKTVPVEAVT K N A Q K T 2 0 1 1 0 2 1 0 0 0 0 1 0 1 0 3 2 0 1 2 0 0 17 0 1873.8694 Q14247 Q14247 320 336 CTTN Src substrate cortactin yes yes 2;3 1.4911E-11 127.78 By MS/MS By MS/MS 2 2 70779000 35145000 35634000 3891 1945 4348 9787;9788;9789;9790 8986;8987;8988;8989 8988 7702 4 NASVPNLR ________________ NASVPNLRGSEERLLA R N A L R G 1 1 2 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 8 0 869.47191 E9PPF9;E9PLD2;Q9H019;E9PNJ0;E9PPQ0;E9PRW1;E9PSD6;C9JF50;E9PLU1;E9PRK5 E9PPF9 4 11 MTFR1L Mitochondrial fission regulator 1-like yes no 2 0.013062 82.645 By MS/MS By MS/MS 1 1 39033000 20452000 18581000 3892 821 4349 9791;9792 8990;8991 8990 1468 2 NATDLQNSSMSEEELTK ETLSGLAKNATDLQNS MSEEELTKAMEGLGMD K N A T K A 1 0 2 1 0 1 3 0 0 0 2 1 1 0 0 3 2 0 0 0 0 0 17 0 1895.8419 Q5QNY5;H0YJ60;P40855 Q5QNY5 119 135 PEX19 Peroxisomal biogenesis factor 19 yes no 2 2.5273E-05 98.507 By MS/MS By MS/MS 1 1 7545500 3306200 4239300 3893 1079 4350 9793;9794 8992;8993;8994;8995 8992 1992;1993 4 NATLAWDSSHSSIQNSPK PHIKIEMKNATLAWDS SSIQNSPKLTPKMKKD K N A P K L 2 0 2 1 0 1 0 0 1 1 1 1 0 0 1 5 1 1 0 0 0 0 18 0 1941.9181 O15440 O15440 494 511 ABCC5 Multidrug resistance-associated protein 5 yes yes 2;3 6.9953E-05 83.617 By MS/MS By MS/MS 2 2 12470000 8054800 4415500 3894 1367 4351 9795;9796;9797;9798 8996;8997;8998 8997 2496;2497;2498 3 NATLAWDSSHSSIQNSPKLTPK PHIKIEMKNATLAWDS NSPKLTPKMKKDKRAS K N A P K M 2 0 2 1 0 1 0 0 1 1 2 2 0 0 2 5 2 1 0 0 0 0 22 1 2381.1975 O15440 O15440 494 515 ABCC5 Multidrug resistance-associated protein 5 yes yes 3 0.017613 43.848 By MS/MS 1 2296800 2296800 0 3895 1367 4352 9799 8999 8999 2496;2497;2498 1 NATQHTAGYFGSDVKVAYQLATR QQLALLLRNATQHTAG VAYQLATRLLAHESTQ R N A T R L 4 1 1 1 0 2 0 2 1 0 1 1 0 1 0 1 3 0 2 2 0 0 23 1 2497.235 Q9HCU4 Q9HCU4 2061 2083 CELSR2 Cadherin EGF LAG seven-pass G-type receptor 2 yes yes 3 0.013448 55.007 By MS/MS 1 0 0 0 3896 2698 4353 9800 9000 9000 5506 1 NATSPQVQRPSFMDYFDKQDFK EEDGTMKRNATSPQVQ YFDKQDFKNKSHENCN R N A F K N 1 1 1 3 0 3 0 0 0 0 0 2 1 3 2 2 1 0 1 1 0 0 22 2 2648.2329 A0A087WZ06;Q13188 A0A087WZ06 271 292 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes no 3 0.0048371 54.658 By MS/MS By matching 1 1 13573000 7913400 5659400 3897 103 4354 9801;9802 9001 9001 193 1 NAVALSASPQLK LALANSSRNAVALSAS LSASPQLKEAQSEKEE R N A L K E 3 0 1 0 0 1 0 0 0 0 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1197.6717 Q92547 Q92547 881 892 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 3.9162E-05 118.73 By MS/MS By MS/MS 1 1 23838000 12435000 11403000 3898 2424 4355 9803;9804 9002;9003 9003 4874 2 NCLALGGSTSPTSVIK VIPDLNLRNCLALGGS TSPTSVIKFLLAGSKQ R N C I K F 1 0 1 0 1 0 0 2 0 1 2 1 0 0 1 3 2 0 0 1 0 0 16 0 1603.824 Q8NFU7 Q8NFU7 313 328 TET1 Methylcytosine dioxygenase TET1 yes yes 2 0.00042708 83.966 By MS/MS By MS/MS 1 1 5842500 3085300 2757200 3899 2356 4356 9805;9806 9004;9005 9005 4727;4728;6967 2 NCPAVTLTSPAK DLPSPDSRNCPAVTLT VTLTSPAKTKILPPRK R N C A K T 2 0 1 0 1 0 0 0 0 0 1 1 0 0 2 1 2 0 0 1 0 0 12 0 1257.6387 Q9UGU0 Q9UGU0 1327 1338 TCF20 Transcription factor 20 yes yes 2 0.0012583 110.64 By MS/MS By matching 1 1 10393000 9564100 829420 3900 2810 4357 9807;9808 9006 9006 5761;7084 1 NCPAVTLTSPAKTK DLPSPDSRNCPAVTLT LTSPAKTKILPPRKGR R N C T K I 2 0 1 0 1 0 0 0 0 0 1 2 0 0 2 1 3 0 0 1 0 0 14 1 1486.7814 Q9UGU0 Q9UGU0 1327 1340 TCF20 Transcription factor 20 yes yes 3 0.018208 52.569 By MS/MS By matching 1 1 5977500 3594500 2383000 3901 2810 4358 9809;9810 9007 9007 5761;7084 1 NCPPSPLPLISK STNRQIQKNCPPSPLP SPLPLISKQSPQTSFP K N C S K Q 0 0 1 0 1 0 0 0 0 1 2 1 0 0 4 2 0 0 0 0 0 0 12 0 1321.7064 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 479 490 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.0013396 97.69 By MS/MS By MS/MS 1 1 30678000 21140000 9537600 3902 195 4359 9811;9812 9008;9009;9010;9011;9012;9013;9014 9008 352 7 NDAPTPGTSTTPGLR KSNTPTPRNDAPTPGT TSTTPGLRSMPGKPPG R N D L R S 1 1 1 1 0 0 0 2 0 0 1 0 0 0 3 1 4 0 0 0 0 0 15 0 1483.7267 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 324 338 TLE3 Transducin-like enhancer protein 3 yes no 2 6.3515E-44 177.39 By MS/MS By MS/MS 2 2 59700000 33555000 26145000 3903 897 4360 9813;9814;9815;9816 9015;9016;9017;9018;9019;9020 9016 6470;6471 6 NDARSPGSISYLPSFFTK GAEPAEQRNDARSPGS YLPSFFTKLENTSPMV R N D T K L 1 1 1 1 0 0 0 1 0 1 1 1 0 2 2 4 1 0 1 0 0 0 18 1 1985.9847 A0A088AWL3;O75376;E7EVK1;J3KS29;J3QKP0 A0A088AWL3 2084 2101 NCOR1 Nuclear receptor corepressor 1 yes no 3 0.013457 48.51 By MS/MS By MS/MS 1 1 15552000 8940800 6611600 3904 151 4361 9817;9818 9021;9022 9022 267;268 2 NDENKDNVDTPCSQASAHSDLNDGEK ESKCETEKNDENKDNV SDLNDGEKTSLHPCDP K N D E K T 2 0 4 5 1 1 2 1 1 0 1 2 0 0 1 3 1 0 0 1 0 0 26 1 2859.1849 Q8NEZ4;H7BY37 Q8NEZ4 2842 2867 KMT2C Histone-lysine N-methyltransferase 2C yes no 3 0.030304 41.208 By MS/MS 1 0 0 0 3905 2351 4362 9819 9023 9023 1 NDFQLIGIQDGYLSLLQDSGEVR MDVPNIKRNDFQLIGI LQDSGEVREDLRLPEG R N D V R E 0 1 1 3 0 3 1 3 0 2 4 0 0 1 0 2 0 0 1 1 0 0 23 0 2579.2867 I3L397;I3L504;P63241 I3L397 87 109 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 2 3.143E-15 140.81 By MS/MS By MS/MS 1 1 13039000 6673000 6365600 3906 1210 4363 9820;9821 9024;9025 9025 2 NDHLTSTTSSPGVIVPESSENK GLSKRKHRNDHLTSTT VPESSENKNLGGVTQE R N D N K N 0 0 2 1 0 0 2 1 1 1 1 1 0 0 2 5 3 0 0 2 0 0 22 0 2298.0975 H7C608;E2QRF9;O75496 H7C608 55 76 GMNN Geminin yes no 3 0.0047872 51.114 By MS/MS 1 6121800 0 6121800 3907 688 4364 9822 9026 9026 1212;1213;1214;6402;6403 1 NDISPPGR QFDASTPKNDISPPGR NDISPPGRFFSSQIPS K N D G R F 0 1 1 1 0 0 0 1 0 1 0 0 0 0 2 1 0 0 0 0 0 0 8 0 854.42463 B5MDQ0;Q2NKX8 B5MDQ0 943 950 ERCC6L DNA excision repair protein ERCC-6-like yes no 2 0.021922 82.831 By MS/MS 1 0 0 0 3908 508 4365 9823 9027 9027 1 NDKSEEEQSSSSVK SKQAVEMKNDKSEEEQ EQSSSSVKKDETNVKM K N D V K K 0 0 1 1 0 1 3 0 0 0 0 2 0 0 0 5 0 0 0 1 0 0 14 1 1552.6853 G3V5V7;G3V2D6;G3V4W0;B4DY08;B2R5W2;P07910;G3V4C1;G3V2Q1 G3V5V7 114 127 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2 2.4032E-89 216 By MS/MS By MS/MS 1 2 58784000 33198000 25586000 3909 471 4366 9824;9825;9826 9028;9029 9028 897 2 NDLAVVDVR GISDVFAKNDLAVVDV DLAVVDVRIGMTRKFG K N D V R I 1 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 9 0 999.53491 P19338 P19338 334 342 NCL Nucleolin yes yes 2 0.0059969 109.44 By MS/MS By MS/MS 1 1 6040800 3204000 2836800 3910 1604 4367 9827;9828 9030;9031 9031 2 NDLQDTEISPR EAWEASHKNDLQDTEI QDTEISPRQNRRTRAA K N D P R Q 0 1 1 2 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1286.6103 Q9NS91 Q9NS91 463 473 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 2 3.0125E-06 145.61 By MS/MS By MS/MS 1 1 71551000 40609000 30942000 3911 2727 4368 9829;9830 9032;9033;9034 9034 5572 3 NDQEPPPEALDFSDDEKEK KGSDASWKNDQEPPPE FSDDEKEKEAKQRKKS K N D E K E 1 0 1 4 0 1 4 0 0 0 1 2 0 1 3 1 0 0 0 0 0 0 19 1 2201.9601 Q96HR8 Q96HR8 303 321 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes yes 3 0.0083804 50.426 By matching By MS/MS 1 1 15411000 7507900 7902900 3912 2501 4369 9831;9832 9035 9035 5037 1 NDSLVTPSPQQAR RQNGQLVRNDSLVTPS TPSPQQARVCPPHMLP R N D A R V 1 1 1 1 0 2 0 0 0 0 1 0 0 0 2 2 1 0 0 1 0 0 13 0 1411.7056 H7C433;A0A0A0MS29;E9PQX8 H7C433 27 39 MFF yes no 2 0.0017688 90.412 By MS/MS By MS/MS 1 1 18534000 10080000 8454400 3913 207 4370 9833;9834 9036;9037 9037 374 2 NDSPTQIPVSSDVCR TLSASGARNDSPTQIP PVSSDVCRLTPA____ R N D C R L 0 1 1 2 1 1 0 0 0 1 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1673.7679 Q8TC07 Q8TC07 673 687 TBC1D15 TBC1 domain family member 15 yes yes 2;3 0.0027792 68.481 By matching By MS/MS 2 2 177050000 93878000 83169000 3914 2375 4371 9835;9836;9837;9838 9038;9039 9038 4756 2 NDSVIVADQTPTPTR TLKFGPARNDSVIVAD DQTPTPTRFLKNCEEV R N D T R F 1 1 1 2 0 1 0 0 0 1 0 0 0 0 2 1 3 0 0 2 0 0 15 0 1612.8057 E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336 E9PEK8 60 74 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes no 2 1.1968E-34 165.89 By MS/MS By MS/MS 1 1 9410100 5761600 3648500 3915 534 4372 9839;9840 9040;9041;9042 9040 6364;6365 3 NDSWGSFDLR RYQRGLERNDSWGSFD SWGSFDLRAAIVYHTK R N D L R A 0 1 1 2 0 0 0 1 0 0 1 0 0 1 0 2 0 1 0 0 0 0 10 0 1195.5258 Q7Z417 Q7Z417 650 659 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 1.9119E-05 130.69 By MS/MS By MS/MS 1 1 63364000 39775000 23589000 3916 2214 4373 9841;9842 9043;9044 9044 4415 2 NEEDAAELVALAQAVNAR HGRPPRPRNEEDAAEL LAQAVNARALPAVQQN R N E A R A 6 1 2 1 0 1 3 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0 18 0 1882.9385 P22314 P22314 351 368 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 1.0574E-55 177.93 By MS/MS By MS/MS 1 1 16288000 7621300 8667000 3917 1617 4374 9843;9844 9045;9046 9045 2 NEEENIYSVPHDSTQGK MDAVVKPRNEEENIYS PHDSTQGKIITIRNIN R N E G K I 0 0 2 1 0 1 3 1 1 1 0 1 0 0 1 2 1 0 1 1 0 0 17 0 1945.8654 Q9NRY4 Q9NRY4 1099 1115 ARHGAP35 Rho GTPase-activating protein 35 yes yes 2;3 2.0739E-219 260.5 By MS/MS By MS/MS 2 2 101230000 53341000 47885000 3918 2725 4375 9845;9846;9847;9848 9047;9048;9049;9050 9048 5568;7904 4 NEEPSEEEIDAPKPK SKTKKVTKNEEPSEEE EIDAPKPKKMKKEKEM K N E P K K 1 0 1 1 0 0 5 0 0 1 0 2 0 0 3 1 0 0 0 0 0 0 15 1 1710.7948 Q9NR30 Q9NR30 117 131 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 4.3796E-69 198.51 By MS/MS By MS/MS 2 1 162320000 126210000 36111000 3919 2716 4376 9849;9850;9851 9051;9052;9053 9052 5548 3 NEGVVGGEDYEEVDRYSR YAPRHSRRNEGVVGGE EEVDRYSRQGRVARAG R N E S R Q 0 2 1 2 0 0 4 3 0 0 0 0 0 0 0 1 0 0 2 3 0 0 18 1 2071.9083 H3BQQ2;Q86UK7 H3BQQ2 242 259 ZNF598 Zinc finger protein 598 yes no 3 5.2752E-06 85.28 By MS/MS By MS/MS 1 1 15437000 9381700 6055000 3920 1131 4377 9852;9853 9054;9055 9055 2066;7462 2 NEIIQSPISQVPSVEK NETGDITRNEIIQSPI SQVPSVEKLSMNTGNE R N E E K L 0 0 1 0 0 2 2 0 0 3 0 1 0 0 2 3 0 0 0 2 0 0 16 0 1766.9414 Q7Z3T8 Q7Z3T8 934 949 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 2 0.00068906 81.594 By MS/MS By MS/MS 1 1 12320000 5721600 6598600 3921 2212 4378 9854;9855 9056;9057 9057 4410 2 NEIISKLQGRYGCCR VNLVNVTKNEIISKLQ QGRYGCCRFLRDGYKT K N E C R F 0 2 1 0 2 1 1 2 0 2 1 1 0 0 0 1 0 0 1 0 0 0 15 2 1852.9036 P46019 P46019 281 295 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 2 0.013522 55.196 By MS/MS 1 0 0 0 3922 1705 4379 9856 9058 9058 3151;7607 1 NEINSLQSSEGLLEKIIK SGPQAFDKNEINSLQS GLLEKIIKQAKHIFLR K N E I K Q 0 0 2 0 0 1 3 1 0 3 3 2 0 0 0 3 0 0 0 0 0 0 18 1 2014.0946 Q9NVC6 Q9NVC6 416 433 MED17 Mediator of RNA polymerase II transcription subunit 17 yes yes 2 0.020712 50.95 By MS/MS 1 0 0 0 3923 2739 4380 9857 9059 9059 5607;5608;5609 1 NELAIDFAKSDK N E D K 2 0 1 2 0 0 1 0 0 1 1 2 0 1 0 1 0 0 0 0 0 0 12 1 1349.6827 REV__Q5SZG2 yes no 3 0.0064744 64.827 By matching By MS/MS 1 2 30940000 5877100 25063000 + 3924 2999 4381 9858;9859;9860 9060 9060 6190 1 NELSKNYGAK N E A K 1 0 2 0 0 0 1 1 0 0 1 2 0 0 0 1 0 0 1 0 0 0 10 1 1122.5669 REV__P48552 yes yes 2 0.015151 69.65 By MS/MS By matching 2 1 5722500 3767900 1954600 + 3925 2986 4382 9861;9862;9863 9061 9061 6175 1 NENTEGSPQEDGVELEGLK KKNKKKIKNENTEGSP GVELEGLKQRLEKKQK K N E L K Q 0 0 2 1 0 1 5 3 0 0 2 1 0 0 1 1 1 0 0 1 0 0 19 0 2043.9233 P11388 P11388 1241 1259 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.00013421 78.486 By MS/MS By MS/MS 1 1 25311000 13776000 11536000 3926 1565 4383 9864;9865 9062;9063;9064 9064 2872;6668 3 NESLTATDGLR NLSCALRRNESLTATD LTATDGLRGVRRNSSF R N E L R G 1 1 1 1 0 0 1 1 0 0 2 0 0 0 0 1 2 0 0 0 0 0 11 0 1175.5782 H0Y507;Q5TCZ1 H0Y507 927 937 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.0023083 90.731 By MS/MS By MS/MS 1 1 9425000 4707700 4717200 3927 1022 4384 9866;9867 9065;9066 9066 1899 2 NEVNGTSEDIKSEGDTQSN ESKESDTKNEVNGTSE SEGDTQSN________ K N E S N - 0 0 3 2 0 1 3 2 0 1 0 1 0 0 0 3 2 0 0 1 0 0 19 1 2022.8614 O95232 O95232 414 432 LUC7L3 Luc7-like protein 3 yes yes 2 0.0081152 59.9 By MS/MS By matching 1 1 5676700 3586800 2090000 3928 1478 4385 9868;9869 9067 9067 2734 1 NEVYETFSYPESYSPTLPVSR LKLQKMKKNEVYETFS SPTLPVSRRENNSPSN K N E S R R 0 1 1 0 0 0 3 0 0 0 1 0 0 1 3 4 2 0 3 2 0 0 21 0 2464.1434 Q5H966;Q9UN30 Q5H966 98 118 SCML1 Sex comb on midleg-like protein 1 yes no 2 0.019099 48.704 By MS/MS By matching 1 1 6618500 3779200 2839400 3929 2067 4386 9870;9871 9068 9068 4058;4059 1 NFDFEGSLSPVIAPK TDRLAWTRNFDFEGSL LSPVIAPKKARPSETG R N F P K K 1 0 1 1 0 0 1 1 0 1 1 1 0 2 2 2 0 0 0 1 0 0 15 0 1619.8195 Q9H1A4;H0Y564 Q9H1A4 680 694 ANAPC1 Anaphase-promoting complex subunit 1 yes no 2 2.4352E-120 220.97 By MS/MS By MS/MS 1 1 119140000 72672000 46469000 3930 2635 4387 9872;9873 9069;9070 9070 5367 2 NFIGNSNHGSQSPR DAYFTEIRNFIGNSNH NHGSQSPRNVEERMNG R N F P R N 0 1 3 0 0 1 0 2 1 1 0 0 0 1 1 3 0 0 0 0 0 0 14 0 1513.7022 E7EUL6;A0A0C3SFZ7;E7EQ57;Q03112 E7EUL6 840 853 MECOM MDS1 and EVI1 complex locus protein EVI1 yes no 2;3 0.00042633 107.63 By MS/MS By MS/MS 2 2 33039000 17912000 15128000 3931 262 4388 9874;9875;9876;9877 9071;9072;9073;9074 9071 477;478 4 NFILDQTNVSAAAQR EIAARKKRNFILDQTN NVSAAAQRRKMCLFAG R N F Q R R 3 1 2 1 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 15 0 1646.8376 Q00839 Q00839 576 590 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.0057185 71.176 By MS/MS By matching 1 1 9876200 6245800 3630300 3932 1827 4389 9878;9879 9075 9075 0 NFTKPQDGDVIAPLITPQKK FVQWCADRNFTKPQDG PLITPQKKEWNDSTSV R N F K K E 1 0 1 2 0 2 0 1 0 2 1 3 0 1 3 0 2 0 0 1 0 0 20 2 2209.2107 Q9Y3Z3 Q9Y3Z3 577 596 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 3;4 0.00024237 74.278 By MS/MS By MS/MS 2 2 53180000 28519000 24661000 3933 2914 4390 9880;9881;9882;9883 9076;9077;9078;9079 9077 7129 4 NFVFHTLSPVKAEAAK PSAPRNSRNFVFHTLS PVKAEAAKESSKSQVK R N F A K E 3 0 1 0 0 0 1 0 1 0 1 2 0 2 1 1 1 0 0 2 0 0 16 1 1757.9465 E7ESG2;Q9HAW4 E7ESG2 1229 1244 CLSPN Claspin yes no 3 0.0022732 65.085 By MS/MS By MS/MS 1 1 9091000 4760900 4330100 3934 731 4391 9884;9885 9080;9081 9080 1310 2 NFYESDDDQKEK DELEDNGKNFYESDDD SDDDQKEKTDKKKKPY K N F E K T 0 0 1 3 0 1 2 0 0 0 0 2 0 1 0 1 0 0 1 0 0 0 12 1 1516.6318 O00203 O00203 272 283 AP3B1 AP-3 complex subunit beta-1 yes yes 2 6.5498E-11 154.36 By MS/MS By MS/MS 1 1 15754000 6178800 9575400 3935 1325 4392 9886;9887 9082;9083;9084 9082 2390 3 NGAAGPHSPDPLLDEQAFGDLTDLPVVPK TEEAVPRRNGAAGPHS TDLPVVPKATYGLKHA R N G P K A 3 0 1 4 0 1 1 3 1 0 4 1 0 1 5 1 1 0 0 2 0 0 29 0 2969.4771 Q9H3Q1 Q9H3Q1 167 195 CDC42EP4 Cdc42 effector protein 4 yes yes 3 0.014969 41.784 By MS/MS 1 4904300 4904300 0 3936 2654 4393 9888 9085 9085 5416 1 NGAAKQSNPKSSPGQPEAGPEGAQER ________________ GPEGAQERPSQAAPAV K N G E R P 4 1 2 0 0 3 3 4 0 0 0 2 0 0 4 3 0 0 0 0 0 0 26 2 2591.2324 P40222 P40222 8 33 TXLNA Alpha-taxilin yes yes 3 0.027631 41.76 By MS/MS 1 0 0 0 3937 1684 4394 9889 9086 9086 1 NGDPRIRMLEVSR EYNELMVRNGDPRIRM IRMLEVSRDGRKHSLP R N G S R D 0 3 1 1 0 0 1 1 0 1 1 0 1 0 1 1 0 0 0 1 0 0 13 2 1541.8096 O15018 O15018 525 537 PDZD2 PDZ domain-containing protein 2;Processed PDZ domain-containing protein 2 yes yes 2 0.0099532 53.754 By MS/MS 1 4783500 0 4783500 3938 1352 4395 9890 9087 9087 162 2469 1 NGDVSQFPYVEFTGR EVHNEDGRNGDVSQFP PYVEFTGRDSVTCPTC R N G G R D 0 1 1 1 0 1 1 2 0 0 0 0 0 2 1 1 1 0 1 2 0 0 15 0 1714.7951 F2Z3N7;C9JZ87;Q9NUM4 F2Z3N7 42 56 TMEM106B Transmembrane protein 106B yes no 2 0.00019197 96.067 By MS/MS By matching 1 1 15137000 6429000 8707800 3939 622 4396 9891;9892 9088;9089 9089 7330 2 NGILAIEGTGSDVDDDMSGDEKQDNESNVDPR LYMIPSIRNGILAIEG NESNVDPRDDVFGYPQ R N G P R D 1 1 3 7 0 1 3 4 0 2 1 1 1 0 1 3 1 0 0 2 0 0 32 1 3391.4594 Q93008 Q93008 1583 1614 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 0.00093239 55.587 By MS/MS By MS/MS 2 2 243610000 121870000 121740000 3940 2451 4397;4398 9893;9894;9895;9896 9090;9091;9092;9093 9091 329 4940;4941;6991 4 NGILASPQSAPGNLDNSK SDPHLLERNGILASPQ PGNLDNSKSGEIKGNG R N G S K S 2 0 3 1 0 1 0 2 0 1 2 1 0 0 2 3 0 0 0 0 0 0 18 0 1781.8908 C9JRP1 C9JRP1 250 267 SLC4A7 Anion exchange protein yes yes 2 1.1073E-05 92.671 By MS/MS By MS/MS 2 2 62393000 30697000 31696000 3941 606 4399;4400 9897;9898;9899;9900 9094;9095;9096;9097 9095 1108 4 NGKEQYVPPRSPK IPQGVTRRNGKEQYVP YVPPRSPK________ R N G P K - 0 1 1 0 0 1 1 1 0 0 0 2 0 0 3 1 0 0 1 1 0 0 13 2 1498.7892 Q71RC2;X6RLN4 Q71RC2 712 724 LARP4 La-related protein 4 yes no 3 0.022976 54.292 By MS/MS By MS/MS 1 1 16642000 9586200 7055400 3942 2193 4401 9901;9902 9098;9099 9099 4368 2 NGLAAELGPASPR GGAPNGVRNGLAAELG ELGPASPRRAGALRRN R N G P R R 3 1 1 0 0 0 1 2 0 0 2 0 0 0 2 1 0 0 0 0 0 0 13 0 1251.6571 Q9BX95 Q9BX95 91 103 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 2 1.1731E-10 129.38 By MS/MS By MS/MS 2 1 7269200 3452300 3817000 3943 2596 4402;4403 9903;9904;9905 9100;9101;9102 9100 5256 3 NGLTSTYAGIR LYRHRKKRNGLTSTYA TSTYAGIRKVPSFTFT R N G I R K 1 1 1 0 0 0 0 2 0 1 1 0 0 0 0 1 2 0 1 0 0 0 11 0 1151.5935 A0A0A0MSX4;Q9Y6N7;A0A087WZ85;A0A087WTM1 A0A0A0MSX4 806 816 ROBO1 Roundabout homolog 1 yes no 2 2.5502E-06 128.86 By MS/MS By MS/MS 2 3 69093000 37652000 31441000 3944 228 4404;4405 9906;9907;9908;9909;9910 9103;9104;9105;9106;9107 9105 7206 5 NGPLNESQEDEEDSEHGTSLNR KILFQETRNGPLNESQ EHGTSLNREMDSLGSN R N G N R E 0 1 3 2 0 1 5 2 1 0 2 0 0 0 1 3 1 0 0 0 0 0 22 0 2456.0324 Q9H2K8 Q9H2K8 318 339 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 3 0.013346 45.844 By MS/MS By matching 1 1 24134000 14426000 9707200 3945 2646 4406 9911;9912 9108 9108 5392 1 NGPLPIPSEGSGFTK TALGEIGRNGPLPIPS SEGSGFTKLHLVESLL R N G T K L 0 0 1 0 0 0 1 3 0 1 1 1 0 1 3 2 1 0 0 0 0 0 15 0 1499.762 R4GMY1;J3KN16;Q5VYK3 R4GMY1 823 837 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 2 0.00034805 93.106 By MS/MS By MS/MS 1 1 3606400 1930800 1675600 3946 1220 4407 9913;9914 9109;9110;9111 9111 2210;2211;6559 3 NGQDLGVAFK EVELSYAKNGQDLGVA QDLGVAFKISKEVLAG K N G F K I 1 0 1 1 0 1 0 2 0 0 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1047.5349 Q00839;Q5RI18 Q00839 424 433 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 2 0.0034724 90.709 By MS/MS 1 981360 0 981360 3947 1827 4408 9915 9112 9112 1 NGSEADIDEGLYSR VPTNGMAKNGSEADID IDEGLYSRQLYVLGHE K N G S R Q 1 1 1 2 0 0 2 2 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1524.6692 P22314;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3;Q5JRS2 P22314 44 57 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 6.4222E-46 186.58 By MS/MS By MS/MS 4 4 153600000 78738000 74858000 3948 1617 4409;4410 9916;9917;9918;9919;9920;9921;9922;9923 9113;9114;9115;9116;9117;9118;9119;9120 9113 13 2988;2989;7575 8 NGSLTNHFSFEK QINGSVLKNGSLTNHF TNHFSFEKKKARVAVL K N G E K K 0 0 2 0 0 0 1 1 1 0 1 1 0 2 0 2 1 0 0 0 0 0 12 0 1379.647 A0A140TA71;P22102 A0A140TA71 58 69 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 2;3 2.3507E-08 129.17 By MS/MS By MS/MS 2 2 15420000 7635100 7785100 3949 361 4411 9924;9925;9926;9927 9121;9122;9123;9124 9121 671 4 NGSPTPAGSLGGGAVATAGGPGSR ________________ TAGGPGSRLQPMRATV R N G S R L 4 1 1 0 0 0 0 8 0 0 1 0 0 0 3 3 2 0 0 1 0 0 24 0 1994.977 Q6P1L5 Q6P1L5 8 31 FAM117B Protein FAM117B yes yes 2;3 3.6842E-10 92.552 By MS/MS By matching 2 2 46511000 29892000 16619000 3950 2152 4412 9928;9929;9930;9931 9125;9126 9126 4285;6903 2 NGSTAVAESVASPQK KPATGERKNGSTAVAE ESVASPQKTMSVLSCI K N G Q K T 3 0 1 0 0 1 1 1 0 0 0 1 0 0 1 3 1 0 0 2 0 0 15 0 1444.7158 Q12888;A6NNK5;C9JXV0 Q12888 1017 1031 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 1.2756E-24 115.58 By MS/MS By MS/MS 3 2 21911000 12090000 9821100 3951 1882 4413;4414 9932;9933;9934;9935;9936 9127;9128;9129;9130 9128 3578;3579 3 NGSVVSLQSPGSR SRSVPQIKNGSVVSLQ SLQSPGSRSSSAGGTS K N G S R S 0 1 1 0 0 1 0 2 0 0 1 0 0 0 1 4 0 0 0 2 0 0 13 0 1286.6579 H0YLX2;Q2KHR2 H0YLX2 416 428 RFX7 DNA-binding protein RFX7 yes no 2 0.0040197 76.156 By MS/MS By matching 1 1 4081300 1750600 2330700 3952 1094 4415 9937;9938 9131 9131 2012 1 NGTGQSSDSEDLPVLDNSSK SAAAKNEKNGTGQSSD PVLDNSSKCTPVKHLN K N G S K C 0 0 2 3 0 1 1 2 0 0 2 1 0 0 1 5 1 0 0 1 0 0 20 0 2048.9134 P29374 P29374 1103 1122 ARID4A AT-rich interactive domain-containing protein 4A yes yes 2 0.015002 50.806 By matching By MS/MS 1 1 4387700 2631200 1756400 3953 1646 4416 9939;9940 9132 9132 3039;3040 1 NGTLILSPVDIK IGQVGKFKNGTLILSP ILSPVDIKKINSSRVA K N G I K K 0 0 1 1 0 0 0 1 0 2 2 1 0 0 1 1 1 0 0 1 0 0 12 0 1268.734 Q5TBI2;Q8NDD1 Q5TBI2 236 247 C1orf131 Uncharacterized protein C1orf131 yes no 2 0.0010099 93.823 By MS/MS By MS/MS 2 1 7460800 3670200 3790700 3954 2108 4417;4418 9941;9942;9943 9133;9134;9135 9135 4162 3 NGTLILSPVDIKK IGQVGKFKNGTLILSP LSPVDIKKINSSRVAK K N G K K I 0 0 1 1 0 0 0 1 0 2 2 2 0 0 1 1 1 0 0 1 0 0 13 1 1396.829 Q5TBI2;Q8NDD1 Q5TBI2 236 248 C1orf131 Uncharacterized protein C1orf131 yes no 2 0.00039955 112.62 By MS/MS By matching 1 1 3953900 2132200 1821700 3955 2108 4419 9944;9945 9136 9136 4162 1 NGVAAEVSPAKEENPR DYFGPPAKNGVAAEVS PAKEENPRRASKAVEE K N G P R R 3 1 2 0 0 0 3 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 16 1 1666.8275 Q9BW71 Q9BW71 118 133 HIRIP3 HIRA-interacting protein 3 yes yes 2;3 0.00010931 96.143 By MS/MS By MS/MS 2 2 61646000 34452000 27194000 3956 2589 4420;4421 9946;9947;9948;9949 9137;9138;9139;9140 9138 5241 4 NGVIQHTGAAAEEFNDDTD DDDVQRERNGVIQHTG EEFNDDTD________ R N G T D - 3 0 2 3 0 1 2 2 1 1 0 0 0 1 0 0 2 0 0 1 0 0 19 0 2002.8504 Q8WU17 Q8WU17 646 664 RNF139 E3 ubiquitin-protein ligase RNF139 yes yes 2 2.9842E-06 102.37 By MS/MS By MS/MS 2 2 20470000 9268500 11201000 3957 2396 4422;4423 9950;9951;9952;9953 9141;9142;9143;9144;9145 9144 24 6974 5 NHAQSRNMQLYSKMSLSSR N H S R 1 2 2 0 0 2 0 0 1 0 2 1 2 0 0 5 0 0 1 0 0 0 19 2 2237.0794 REV__Q5T706 yes no 3 0.018457 43.091 By MS/MS 1 46873000 0 46873000 + 3958 3000 4424 9954 9146 9146 6191;6192 1 NHLLQFALESPAKSPASSSSK VKSLNFARNHLLQFAL SPASSSSKNLAVKVYT R N H S K N 3 0 1 0 0 1 1 0 1 0 3 2 0 1 2 6 0 0 0 0 0 0 21 1 2198.1331 Q9NS91;F8WE49 Q9NS91 90 110 RAD18 E3 ubiquitin-protein ligase RAD18 yes no 3 0.0015066 61.757 By MS/MS By MS/MS 3 3 29718000 16174000 13544000 3959 2727 4425;4426 9955;9956;9957;9958;9959;9960 9147;9148;9149;9150;9151;9152 9148 5573;5574 6 NHLSPQQGGATPQVPSPCCR RRGLAHPKNHLSPQQG QVPSPCCRFDSPRGPP K N H C R F 1 1 1 0 2 3 0 2 1 0 1 0 0 0 4 2 1 0 0 1 0 0 20 0 2190.0059 A0A087X0R7;Q9H4L4 A0A087X0R7 96 115 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 8.7628E-09 94.958 By MS/MS By MS/MS 2 3 44709000 23511000 21197000 3960 132 4427;4428 9961;9962;9963;9964;9965 9153;9154;9155;9156;9157;9158;9159 9154 235;236 6 NHSDSSTSESEVSSVSPLK NLQQNEEKNHSDSSTS VSSVSPLKNKHPDEDA K N H L K N 0 0 1 1 0 0 2 0 1 0 1 1 0 0 1 8 1 0 0 2 0 0 19 0 1975.8971 Q9NY27;H7C559;C9IZ04 Q9NY27 211 229 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 2 0.0013926 71.548 By matching By MS/MS 1 1 11342000 5662800 5679100 3961 2754 4429 9966;9967 9160 9160 5630 1 NHSGSRTPPVALNSSR SATPPATRNHSGSRTP PVALNSSRMSCFSRPS R N H S R M 1 2 2 0 0 0 0 1 1 0 1 0 0 0 2 4 1 0 0 1 0 0 16 1 1678.8499 Q9UQ35 Q9UQ35 2098 2113 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0012024 69.261 By MS/MS By MS/MS 1 1 14299000 7663200 6636200 3962 2877 4430 9968;9969 9161;9162 9162 5960;5961;7108 2 NHSNAQFIESYVCR KMTMRLRRNHSNAQFI FIESYVCRMCSRGDED R N H C R M 1 1 2 0 1 1 1 0 1 1 0 0 0 1 0 2 0 0 1 1 0 0 14 0 1723.7737 P41229 P41229 315 328 KDM5C Lysine-specific demethylase 5C yes yes 2 0.0013492 86.114 By MS/MS By matching 1 1 7732200 3517700 4214500 3963 1692 4431 9970;9971 9163 9163 3106 1 NHSVNEEEQEEQGEGSEDEWEQVGPR LTISNGPKNHSVNEEE EWEQVGPRNKTSVTRQ K N H P R N 0 1 2 1 0 3 9 3 1 0 0 0 0 0 1 2 0 1 0 2 0 0 26 0 3026.2398 Q14694;H3BNA1 Q14694 561 586 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 3 0.00041191 58.332 By MS/MS By MS/MS 1 1 309180000 167200000 141980000 3964 1957 4432 9972;9973 9164;9165;9166 9166 3802 3 NIELICQENEGENDPVLQR DFYFGKLRNIELICQE ENDPVLQRIVDILYAT R N I Q R I 0 1 3 1 1 2 4 1 0 2 2 0 0 0 1 0 0 0 0 1 0 0 19 0 2269.0645 Q15691 Q15691 223 241 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 2;3 2.8595E-06 72.891 By MS/MS By MS/MS 2 2 8921700 4750600 4171100 3965 2002 4433 9974;9975;9976;9977 9167;9168;9169;9170 9168 4 NIGNGIISSPLTGK VIPDHSKKNIGNGIIS ISSPLTGKRQDSGTMK K N I G K R 0 0 2 0 0 0 0 3 0 3 1 1 0 0 1 2 1 0 0 0 0 0 14 0 1369.7565 A0A075B784;Q9P275;K7EMM6;E9PEW0 A0A075B784 456 469 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.00081162 98.943 By matching By MS/MS 1 1 5764300 3476600 2287700 3966 13 4434 9978;9979 9171 9171 30 1 NIGRDTPTSAGPNSFNK PEAKMRMKNIGRDTPT AGPNSFNKGKHGFSDN K N I N K G 1 1 3 1 0 0 0 2 0 1 0 1 0 1 2 2 2 0 0 0 0 0 17 1 1774.8598 Q8WW12 Q8WW12 134 150 PCNP PEST proteolytic signal-containing nuclear protein yes yes 3 1.2877E-05 101 By MS/MS By MS/MS 2 2 45002000 27376000 17627000 3967 2405 4435;4436 9980;9981;9982;9983 9172;9173;9174;9175;9176;9177 9172 4810;6978 6 NIIEATHMYDNAAEACSTTEEVFNSPR FKDVVEKKNIIEATHM EEVFNSPRAGSPLCNS K N I P R A 4 1 3 1 1 0 4 0 1 2 0 0 1 1 1 2 3 0 1 1 0 0 27 0 3069.3444 Q9NRY4 Q9NRY4 946 972 ARHGAP35 Rho GTPase-activating protein 35 yes yes 3 3.3544E-05 68.303 By MS/MS By matching 1 1 9039100 5938200 3100900 3968 2725 4437 9984;9985 9178 9178 7065 1 NIIHGSDSVK DFCIQVGRNIIHGSDS IHGSDSVKSAEKEISL R N I V K S 0 0 1 1 0 0 0 1 1 2 0 1 0 0 0 2 0 0 0 1 0 0 10 0 1068.5564 Q32Q12;O60361;P22392 Q32Q12 255 264 NME1-NME2;NME2P1;NME2 Nucleoside diphosphate kinase;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 3 0.013215 64.73 By MS/MS By MS/MS 1 1 4797800 2349800 2448000 3969 1409 4438 9986;9987 9179;9180 9180 2 NIKDVQSPGFLNEPLSSK LSKSATCKNIKDVQSP LNEPLSSKSQRRKSLK K N I S K S 0 0 2 1 0 1 1 1 0 1 2 2 0 1 2 3 0 0 0 1 0 0 18 1 1972.0266 E9PPJ1;Q8NG31;H0YCZ2 E9PPJ1 1044 1061 CASC5 Protein CASC5 yes no 3 0.0032876 59.539 By MS/MS By MS/MS 1 1 7676200 3610800 4065400 3970 835 4439 9988;9989 9181;9182 9182 1509 2 NILSQIVDIDGIWEGTR VEMPGCKKNILSQIVD DGIWEGTRDFAACNHL K N I T R D 0 1 1 2 0 1 1 2 0 4 1 0 0 0 0 1 1 1 0 1 0 0 17 0 1928.0003 P16233 P16233 257 273 PNLIP Pancreatic triacylglycerol lipase yes yes 2;3 5.7658E-17 151.99 By MS/MS By MS/MS 1 2 19725000 10311000 9414400 3971 1583 4440 9990;9991;9992 9183;9184;9185 9184 3 NILVQTPESESPQSHR NLCQACARNILVQTPE SESPQSHRAAGSGVSD R N I H R A 0 1 1 0 0 2 2 0 1 1 1 0 0 0 2 3 1 0 0 1 0 0 16 0 1820.9017 Q9C026 Q9C026 36 51 TRIM9 E3 ubiquitin-protein ligase TRIM9 yes yes 2;3 0.00076034 74.296 By MS/MS By MS/MS 2 2 10965000 6045800 4919500 3972 2611 4441 9993;9994;9995;9996 9186;9187;9188 9186 5283;5284 3 NILYNFLK ESQSQYCRNILYNFLK NILYNFLKLPAKRSIN R N I L K L 0 0 2 0 0 0 0 0 0 1 2 1 0 1 0 0 0 0 1 0 0 0 8 0 1023.5753 H0YM40;H0YMW7;O95395 H0YM40 54 61 GCNT3 Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 yes no 2 0.026819 42.914 By MS/MS 1 0 0 0 3973 1096 4442 9997 9189 9189 7454 1 NINKAQSNGSGNGSDSEMDTSSLER QGKIITIRNINKAQSN MDTSSLERGRKVSIVS R N I E R G 1 1 4 2 0 1 2 3 0 1 1 1 1 0 0 6 1 0 0 0 0 0 25 1 2597.126 Q9NRY4 Q9NRY4 1121 1145 ARHGAP35 Rho GTPase-activating protein 35 yes yes 3 0.009126 46.785 By matching By MS/MS 1 1 13488000 7888900 5599200 3974 2725 4443 9998;9999 9190 9190 5567 1 NINMDNDLEVLTSSPTR STEEVDMKNINMDNDL VLTSSPTRNLNGAYLT K N I T R N 0 1 3 2 0 0 1 0 0 1 2 0 1 0 1 2 2 0 0 1 0 0 17 0 1917.9102 Q9Y5T5 Q9Y5T5 539 555 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 2;3 7.2189E-46 176.44 By MS/MS By matching 2 2 24819000 16686000 8132900 3975 2936 4444 10000;10001;10002;10003 9191;9192 9192 6102 2 NINTFVETPVQK KPAVSDEKNINTFVET FVETPVQKLDLLGNLP K N I Q K L 0 0 2 0 0 1 1 0 0 1 0 1 0 1 1 0 2 0 0 2 0 0 12 0 1388.73 P46013 P46013 2399 2410 MKI67 Antigen KI-67 yes yes 2 0.01127 87.863 By MS/MS By matching 1 1 4988200 2673900 2314300 3976 1704 4445 10004;10005 9193 9193 1 NIPKYDLLYQDI VQSPIDPKNIPKYDLL YDLLYQDI________ K N I D I - 0 0 1 2 0 1 0 0 0 2 2 1 0 0 1 0 0 0 2 0 0 0 12 1 1493.7766 Q9NX01 Q9NX01 138 149 TXNL4B Thioredoxin-like protein 4B yes yes 2 0.00010764 114.51 By MS/MS By MS/MS 1 1 22106000 12418000 9687300 3977 2749 4446 10006;10007 9194;9195 9194 7913 2 NIPSPGQLDPDTR DIETPPTRNIPSPGQL GQLDPDTRIPVINLED R N I T R I 0 1 1 2 0 1 0 1 0 1 1 0 0 0 3 1 1 0 0 0 0 0 13 0 1408.6947 Q9P2D1 Q9P2D1 2556 2568 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 2 0.016563 60.55 By matching By MS/MS 1 1 4594000 1999500 2594500 3978 2788 4447 10008;10009 9196 9196 5724 1 NIPTVNENLENYYLEVNQLEK DLSYNKLKNIPTVNEN LEVNQLEKFDIKSFCK K N I E K F 0 0 5 0 0 1 4 0 0 1 3 1 0 0 1 0 1 0 2 2 0 0 21 0 2535.2493 P51884 P51884 268 288 LUM Lumican yes yes 2 0.0071825 58.814 By matching By MS/MS 1 1 15847000 8869400 6977800 3979 1750 4448 10010;10011 9197 9197 1 NISQDMTQTSGTNLTSEELR LSMQGSSRNISQDMTQ NLTSEELRKRREAYFE R N I L R K 0 1 2 1 0 2 2 1 0 1 2 0 1 0 0 3 4 0 0 0 0 0 20 0 2224.0278 G3V2G2;G3V2G1;G3V3T6;G3V328;G3V4U9;C9JQV6;D3VVH9;A0A0A0MS38;A0A087X1A8;G3V3R7;F5H211;P54252 G3V2G2 84 103 ATXN3 Ataxin-3 yes no 2 1.3336E-08 97.417 By MS/MS 1 5542400 5542400 0 3980 137 4449 10012 9198 9198 242 1 NISSSPSVESLPGGR LNKGLSSKNISSSPSV VESLPGGREFTGSPPS K N I G R E 0 1 1 0 0 0 1 2 0 1 1 0 0 0 2 5 0 0 0 1 0 0 15 0 1485.7423 Q92609;C9J3F6 Q92609 535 549 TBC1D5 TBC1 domain family member 5 yes no 2 0.00029279 90.498 By MS/MS By MS/MS 1 1 13040000 7903300 5136900 3981 2427 4450 10013;10014 9199;9200 9199 4879;4880;4881 2 NISYPMILRNYK ERATWKGRNISYPMIL PMILRNYKAKMPSHLM R N I Y K A 0 1 2 0 0 0 0 0 0 2 1 1 1 0 1 1 0 0 2 0 0 0 12 1 1510.7966 Q8ND61 Q8ND61 304 315 C3orf20 Uncharacterized protein C3orf20 yes yes 3 0.027307 46.796 By MS/MS 1 0 0 0 3982 2341 4451 10015 9201 9201 7806 1 NITYEELR LEESPKRKNITYEELR NITYEELRNKNRESYE K N I L R N 0 1 1 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 8 0 1036.5189 D6RDK6;D6RBN5;Q9NX40 D6RDK6 142 149 OCIAD1 OCIA domain-containing protein 1 yes no 2 0.0035056 103.74 By MS/MS By MS/MS 1 1 26433000 14189000 12244000 3983 661 4452 10016;10017 9202;9203 9202 7345 2 NIYVLQELDNPGAK DKNSVNFKNIYVLQEL ELDNPGAKRILELDQF K N I A K R 1 0 2 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 14 0 1572.8148 B1AHC9;P12956 B1AHC9 51 64 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 1.6819E-07 125.72 By MS/MS By MS/MS 1 1 2893600 1642800 1250800 3984 451 4453 10018;10019 9204;9205 9204 2 NKAITSLLGGGSPK VSASTNARNKAITSLL LLGGGSPKNNTAAETE R N K P K N 1 0 1 0 0 0 0 3 0 1 2 2 0 0 1 2 1 0 0 0 0 0 14 1 1341.7616 Q6KC79 Q6KC79 2647 2660 NIPBL Nipped-B-like protein yes yes 2 0.0010676 102.29 By MS/MS By MS/MS 1 1 5520700 2665500 2855100 3985 2147 4454 10020;10021 9206;9207 9207 4266 2 NKDMKTAIR NPIIYTLRNKDMKTAI KDMKTAIRRLRKWDAH R N K I R R 1 1 1 1 0 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 0 0 9 2 1075.5808 Q96R69;Q8NH21;Q8NGA8 Q96R69 284 292 OR4F4;OR4F5;OR4F17 Olfactory receptor 4F4;Olfactory receptor 4F5;Olfactory receptor 4F17 yes no 3 0.010864 56.916 By MS/MS 1 0 0 0 3986 2359 4455 10022 9208 9208 1 NKENVYTPK RTPANKLKNKENVYTP KENVYTPKSAVKNEEY K N K P K S 0 0 2 0 0 0 1 0 0 0 0 2 0 0 1 0 1 0 1 1 0 0 9 1 1091.5611 Q14680 Q14680 422 430 MELK Maternal embryonic leucine zipper kinase yes yes 2 0.0073194 96.229 By MS/MS 1 0 0 0 3987 1954 4456 10023 9209 9209 6823 1 NKFGSADNIAHLK REFANLIRNKFGSADN ADNIAHLKNSLEEFRP R N K L K N 2 0 2 1 0 0 0 1 1 1 1 2 0 1 0 1 0 0 0 0 0 0 13 1 1413.7365 G3V207;G5E963;A0A1B0GUZ3;A0A0C4DFR1;Q9ULS5;O75069 G3V207 181 193 TMCC3;TMCC2 Transmembrane and coiled-coil domains protein 3;Transmembrane and coiled-coil domains protein 2 yes no 3 0.00063044 97.073 By MS/MS By matching 1 1 5114000 2707300 2406700 3988 266 4457 10024;10025 9210 9210 484 1 NKKANECSSGLK RATYQDQKNKKANECS NECSSGLKYSMELDEM K N K L K Y 1 0 2 0 1 0 1 1 0 0 1 3 0 0 0 2 0 0 0 0 0 0 12 2 1334.6612 Q5HY64 Q5HY64 887 898 FAM47C Putative protein FAM47C yes yes 2 0.015787 65.234 By MS/MS 1 0 0 0 3989 2068 4458 10026 9211 9211 4060;4061 1 NKKSPEIHR GTEQEAAKNKKSPEIH KKSPEIHRRIDISPST K N K H R R 0 1 1 0 0 0 1 0 1 1 0 2 0 0 1 1 0 0 0 0 0 0 9 2 1107.6149 Q9Y2W1 Q9Y2W1 669 677 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0056937 77.74 By MS/MS By MS/MS 1 2 202590000 40445000 162140000 3990 2897 4459 10027;10028;10029 9212;9213;9214;9215 9212 6037 4 NKPGPNIESGNEDDDASFK KGQKKNQKNKPGPNIE EDDDASFKIKTVAQKK K N K F K I 1 0 3 3 0 0 2 2 0 1 0 2 0 1 2 2 0 0 0 0 0 0 19 1 2032.8974 A0A087WUT6;O60841 A0A087WUT6 206 224 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 5.8993E-07 102.19 By MS/MS By MS/MS 2 3 1189600000 605280000 584290000 3991 49 4460 10030;10031;10032;10033;10034 9216;9217;9218;9219 9217 87 4 NKPGPNIESGNEDDDASFKIK KGQKKNQKNKPGPNIE DDASFKIKTVAQKKAE K N K I K T 1 0 3 3 0 0 2 2 0 2 0 3 0 1 2 2 0 0 0 0 0 0 21 2 2274.0764 A0A087WUT6;O60841 A0A087WUT6 206 226 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3;4 3.6373E-10 104.66 By MS/MS By MS/MS 3 3 1048500000 655220000 393310000 3992 49 4461 10035;10036;10037;10038;10039;10040 9220;9221;9222;9223;9224;9225;9226 9220 87 7 NKPGVYTK WGDGCAQKNKPGVYTK NKPGVYTKVYNYVKWI K N K T K V 0 0 1 0 0 0 0 1 0 0 0 2 0 0 1 0 1 0 1 1 0 0 8 1 905.49707 A6XGL3;CON__P07477;E7EQ64;P07477;E9PRA0;J3KQC6;Q9BYE2;CON__P00761 A6XGL3 214 221 PRSS1;TMPRSS13 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2;Transmembrane protease serine 13 no no 1 NaN 0 0 0 + 3993 428;631 0 NKPLSPIKLTPTSVLDYFGTGSVQR NEENTKTKNKPLSPIK FGTGSVQRSNKKMVAS K N K Q R S 0 1 1 1 0 1 0 2 0 1 3 2 0 1 3 3 3 0 1 2 0 0 25 2 2717.4752 P35251 P35251 152 176 RFC1 Replication factor C subunit 1 yes yes 3 2.8331E-20 118.22 By MS/MS 2 47528000 47528000 0 3994 1669 4462;4463 10041;10042 9227;9228 9227 3073 2 NKPRSPVVELSK VQRVPKMKNKPRSPVV SPVVELSKVPLVQRGS K N K S K V 0 1 1 0 0 0 1 0 0 0 1 2 0 0 2 2 0 0 0 2 0 0 12 2 1352.7776 P25098 P25098 666 677 ADRBK1 Beta-adrenergic receptor kinase 1 yes yes 3 0.012561 62.357 By MS/MS By MS/MS 1 1 7847000 3888300 3958600 3995 1630 4464 10043;10044 9229;9230 9229 3017 2 NKPYISWPSSGGSEPSVTVPLR LARQPPSRNKPYISWP PSVTVPLRSMSDPDQD R N K L R S 0 1 1 0 0 0 1 2 0 1 1 1 0 0 4 5 1 1 1 2 0 0 22 1 2357.2016 Q9Y5S2 Q9Y5S2 1635 1656 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 3 0.0019817 57.142 By MS/MS 1 2526900 2526900 0 3996 2934 4465 10045 9231 9231 6099 1 NKQDDDLNCEPLSPHNITPEPVSK CILSVNVKNKQDDDLN ITPEPVSKLPAEPVSG K N K S K L 0 0 3 3 1 1 2 0 1 1 2 2 0 0 4 2 1 0 0 1 0 0 24 1 2746.2868 Q6VMQ6;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9;A8MV73 Q6VMQ6 101 124 ATF7IP Activating transcription factor 7-interacting protein 1 yes no 3 0.0025077 53.747 By MS/MS By matching 1 1 13830000 9255200 4575100 3997 2172 4466 10046;10047 9232 9232 4337;6921 1 NKSNESVDIQDQEEK KKRSGKWKNKSNESVD DIQDQEEKVVKQECIK K N K E K V 0 0 2 2 0 2 3 0 0 1 0 2 0 0 0 2 0 0 0 1 0 0 15 1 1761.8017 Q5UIP0 Q5UIP0 1574 1588 RIF1 Telomere-associated protein RIF1 yes yes 2;3 5.5552E-16 137.91 By MS/MS By MS/MS 2 2 21665000 12621000 9044300 3998 2112 4467 10048;10049;10050;10051 9233;9234;9235;9236 9235 4177 4 NKSSSPEDPGAEV KRSRDHFRNKSSSPED PEDPGAEV________ R N K E V - 1 0 1 1 0 0 2 1 0 0 0 1 0 0 2 3 0 0 0 1 0 0 13 1 1315.5892 Q9Y5U2 Q9Y5U2 317 329 TSSC4 Protein TSSC4 yes yes 2 2.6442E-15 156.36 By MS/MS By MS/MS 1 1 13097000 6926600 6170500 3999 2937 4468 10052;10053 9237;9238;9239 9237 6103;6104 2 NKTSTTSSMVASAEQPR RPIKGILKNKTSTTSS VASAEQPRGNVDEELS K N K P R G 2 1 1 0 0 1 1 0 0 0 0 1 1 0 1 4 3 0 0 1 0 0 17 1 1793.8578 E7EMN6;G1AUC5;Q6NXS1;P41236;E7EUI7 E7EMN6 17 33 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 yes no 3 1.1267E-05 99.747 By MS/MS By MS/MS 1 1 9756000 6050500 3705600 4000 706 4469 10054;10055 9240;9241 9241 1252;1253;6411;6412 2 NLALDEAGQRSTM SEVAARKRNLALDEAG EAGQRSTM________ R N L T M - 2 1 1 1 0 1 1 1 0 0 2 0 1 0 0 1 1 0 0 0 0 0 13 1 1404.6667 Q53TN4 Q53TN4 274 286 CYBRD1 Cytochrome b reductase 1 yes yes 2 0.00029726 113.25 By MS/MS By MS/MS 2 2 28029000 14864000 13166000 4001 2062 4470;4471 10056;10057;10058;10059 9242;9243;9244;9245 9243 278 4050 4 NLALSRESLVV SRERRLKKNLALSRES LSRESLVV________ K N L V V - 1 1 1 0 0 0 1 0 0 0 3 0 0 0 0 2 0 0 0 2 0 0 11 1 1199.6874 S4R3V8;Q86X29 S4R3V8 591 601 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.00085055 106.54 By MS/MS By MS/MS 2 2 40429000 22819000 17610000 4002 2250 4472 10060;10061;10062;10063 9246;9247;9248;9249 9248 4513 4 NLASPNCVKPK PVVRPKIRNLASPNCV SPNCVKPKIFFDTDDD R N L P K I 1 0 2 0 1 0 0 0 0 0 1 2 0 0 2 1 0 0 0 1 0 0 11 1 1226.6441 Q8NG27 Q8NG27 262 272 PJA1 E3 ubiquitin-protein ligase Praja-1 yes yes 2 0.001039 104.94 By MS/MS By MS/MS 1 1 38483000 18420000 20063000 4003 2358 4473 10064;10065 9250;9251 9250 4732 2 NLATSADTPPSTVPGTGK NARKLIQKNLATSADT STVPGTGKSVACSPKK K N L G K S 2 0 1 1 0 0 0 2 0 0 1 1 0 0 3 2 4 0 0 1 0 0 18 0 1712.8581 J3KRA9;Q96Q15 J3KRA9 3456 3473 SMG1 Serine/threonine-protein kinase SMG1 yes no 2 0.0002287 79.326 By MS/MS By MS/MS 2 3 33171000 17843000 15329000 4004 1238 4474;4475 10066;10067;10068;10069;10070 9252;9253;9254;9255 9252 2244;6564 3 NLDIERPTYTNLNR AIYDICRRNLDIERPT PTYTNLNRLISQIVSS R N L N R L 0 2 3 1 0 0 1 0 0 1 2 0 0 0 1 0 2 0 1 0 0 0 14 1 1717.8747 P68363;F5H5D3;Q9BQE3;Q71U36;Q6PEY2;Q13748;F8VQQ4;F8VVB9;P68366;C9J2C0;Q9NY65;C9JDS9 P68363 216 229 TUBA1B;TUBA1C;TUBA1A;TUBA3E;TUBA3C;TUBA4A;TUBA8 Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain;Tubulin alpha-4A chain;Tubulin alpha-8 chain yes no 3 0.0026261 95.183 By MS/MS By matching 1 1 8329300 4868800 3460500 4005 1810 4476 10071;10072 9256 9256 1 NLDPDPEPPSPDSPTETFAAPAEVR KRGRPMTKNLDPDPEP FAAPAEVRHFTDGSFP K N L V R H 3 1 1 3 0 0 3 0 0 0 1 0 0 1 7 2 2 0 0 1 0 0 25 0 2648.2242 Q9BUA3;H0YGY5 Q9BUA3 239 263 C11orf84 Uncharacterized protein C11orf84 yes no 3 2.545E-26 125.11 By MS/MS By MS/MS 2 3 79110000 36887000 42223000 4006 2583 4477;4478 10073;10074;10075;10076;10077 9257;9258;9259;9260 9257 5221;5222 4 NLEELEEKSTTPPPAEPVSLPQEPPK LKPQVEEKNLEELEEK SLPQEPPKAFSWASVT K N L P K A 1 0 1 0 0 1 6 0 0 0 3 2 0 0 7 2 2 0 0 1 0 0 26 1 2855.444 Q9UN86 Q9UN86 217 242 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 3 0.018758 41.087 By matching By MS/MS 1 1 9734600 4385600 5349000 4007 2862 4479 10078;10079 9261 9261 5899 1 NLEQILNGGESPK PNGSVETKNLEQILNG LNGGESPKQKGQEIKR K N L P K Q 0 0 2 0 0 1 2 2 0 1 2 1 0 0 1 1 0 0 0 0 0 0 13 0 1397.7151 G3V340;Q13033;G3V3G7 G3V340 219 231 STRN3 Striatin-3 yes no 2 3.2943E-08 128.74 By MS/MS By MS/MS 1 1 10742000 5890700 4851200 4008 966 4480 10080;10081 9262;9263 9263 1759 2 NLEQILNGGESPKQK PNGSVETKNLEQILNG GGESPKQKGQEIKRSS K N L Q K G 0 0 2 0 0 2 2 2 0 1 2 2 0 0 1 1 0 0 0 0 0 0 15 1 1653.8686 G3V340;Q13033 G3V340 219 233 STRN3 Striatin-3 yes no 2;3 8.1042E-05 112.02 By MS/MS By MS/MS 5 4 38534000 19985000 18549000 4009 966 4481;4482 10082;10083;10084;10085;10086;10087;10088;10089;10090 9264;9265;9266;9267;9268;9269;9270;9271;9272;9273 9268 31 1759 10 NLESHLMSPAEIPGQPVPK PSQPKVSRNLESHLMS IPGQPVPKNILQELLG R N L P K N 1 0 1 0 0 1 2 1 1 1 2 1 1 0 4 2 0 0 0 1 0 0 19 0 2043.0459 Q9NRA8;B0QYZ7 Q9NRA8 506 524 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 3 1.6044E-06 95.591 By MS/MS By MS/MS 1 1 5811600 2539700 3271900 4010 2719 4483 10091;10092 9274;9275 9274 5552 2 NLETLPSFSSDEEDSVAK RLDEELKRNLETLPSF DEEDSVAKNRDLQESI R N L A K N 1 0 1 2 0 0 3 0 0 0 2 1 0 1 1 4 1 0 0 1 0 0 18 0 1966.9007 Q9ULL5 Q9ULL5 552 569 PRR12 Proline-rich protein 12 yes yes 2 0.00076558 73.466 By matching By MS/MS 1 1 15405000 8126500 7278600 4011 2851 4484 10093;10094 9276 9276 5864;5865;5866 1 NLFNQELLSPSKR QEVTKVRRNLFNQELL ELLSPSKRSLKRGLPR R N L K R S 0 1 2 0 0 1 1 0 0 0 3 1 0 1 1 2 0 0 0 0 0 0 13 1 1544.8311 Q7Z2Z1 Q7Z2Z1 915 927 TICRR Treslin yes yes 3 0.0036566 63.134 By matching By MS/MS 1 1 5652300 3310900 2341400 4012 2207 4485 10095;10096 9277 9277 4400 1 NLGSGSPKPR EEVPAFFKNLGSGSPK GSGSPKPRQKFCGMFC K N L P R Q 0 1 1 0 0 0 0 2 0 0 1 1 0 0 2 2 0 0 0 0 0 0 10 1 1011.5461 A0A1C7CYX9 A0A1C7CYX9 22 31 yes yes 2 0.0023725 94.538 By MS/MS By MS/MS 2 1 26582000 14824000 11758000 4013 385 4486 10097;10098;10099 9278;9279;9280 9279 733;734 3 NLGSINTELQDVQR YIDSRARRNLGSINTE TELQDVQRIMVANIEE R N L Q R I 0 1 2 1 0 2 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1585.806 A0A087X1A9;O75396 A0A087X1A9 9 22 SEC22B Vesicle-trafficking protein SEC22b yes no 2 1.7039E-16 152.11 By MS/MS By MS/MS 1 1 33210000 17743000 15467000 4014 138 4487 10100;10101 9281;9282 9281 243 2 NLIDAGVDALR VVTAAQAKNLIDAGVD DAGVDALRVGMGSGSI K N L L R V 2 1 1 2 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1155.6248 H0Y4R1;P12268 H0Y4R1 244 254 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 2 0.022704 66.962 By MS/MS By matching 1 1 2677500 1363200 1314300 4015 1018 4488 10102;10103 9283 9283 1 NLLDSMVLITDK ADLDAEWRNLLDSMVL SMVLITDKFWGTSGVE R N L D K F 0 0 1 2 0 0 0 0 0 1 3 1 1 0 0 1 1 0 0 1 0 0 12 0 1360.7272 H7BZL4;H7C024;H7C410;P35052 H7BZL4 37 48 GPC1 Glypican-1;Secreted glypican-1 yes no 3 0.017397 54.09 By matching By MS/MS 1 1 128400000 118540000 9863500 4016 1161 4489 10104;10105 9284 9284 2109 1 NLLEDDSDEEEDFFLR GSVKSERRNLLEDDSD EEEDFFLRGPSGPRFG R N L L R G 0 1 1 4 0 0 4 0 0 0 3 0 0 2 0 1 0 0 0 0 0 0 16 0 1984.8538 O75379 O75379 24 39 VAMP4 Vesicle-associated membrane protein 4 yes yes 2 2.0344E-24 154.88 By MS/MS By MS/MS 1 1 284430000 166800000 117620000 4017 1435 4490 10106;10107 9285;9286 9285 2644 2 NLLEDDSDEEEDFFLRGPSGPR GSVKSERRNLLEDDSD LRGPSGPRFGPRNDKI R N L P R F 0 2 1 4 0 0 4 2 0 0 3 0 0 2 2 2 0 0 0 0 0 0 22 1 2536.1354 O75379 O75379 24 45 VAMP4 Vesicle-associated membrane protein 4 yes yes 3 5.6368E-09 90.379 By MS/MS By MS/MS 1 1 150490000 82270000 68216000 4018 1435 4491 10108;10109 9287;9288 9288 2644 2 NLLELCLKGMFLKLNYWNTK TSLQFSKKNLLELCLK KLNYWNTKIGLQVKEL K N L T K I 0 0 3 0 1 0 1 1 0 0 6 3 1 1 0 0 1 1 1 0 0 0 20 2 2497.3225 A6NFE2 A6NFE2 117 136 SMCO2 Single-pass membrane and coiled-coil domain-containing protein 2 yes yes 3 0.021886 44.312 By matching By MS/MS 1 1 2595000 1321300 1273700 4019 411 4492 10110;10111 9289 9289 7261 0 NLLLSTSEEQIEK YFSEQPLKNLLLSTSE TSEEQIEKCFIIENIS K N L E K C 0 0 1 0 0 1 3 0 0 1 3 1 0 0 0 2 1 0 0 0 0 0 13 0 1502.7828 P17181 P17181 489 501 IFNAR1 Interferon alpha/beta receptor 1 yes yes 2 1.218E-10 129.77 By MS/MS By MS/MS 1 1 5090400 3159500 1930800 4020 1592 4493 10112;10113 9290;9291 9291 2922 2 NLLPAYRPNLSPPAEAGLALPPTGYR FNKILNSKNLLPAYRP ALPPTGYRCLECGDAF K N L Y R C 4 2 2 0 0 0 1 2 0 0 5 0 0 0 6 1 1 0 2 0 0 0 26 1 2747.4759 Q8N1G0;F8WCX2;H0Y5I5 Q8N1G0 509 534 ZNF687 Zinc finger protein 687 yes no 3 0.012424 43.162 By MS/MS By matching 1 1 3367700 2767100 600600 4021 2298 4494 10114;10115 9292 9292 4620;7794 1 NLLSVAYK VELTVEERNLLSVAYK NLLSVAYKNVIGARRA R N L Y K N 1 0 1 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 8 0 906.51747 E7EX29;P63104;E5RGE1;E5RIR4;E9PD24;E7EVZ2;E7ESK7;P27348;Q04917;P61981;P31947;Q4VY20;A0A0J9YWZ2;Q4VY19;I3L3T1;E9PG15;A0A0J9YWE8;A2IDB2;P62258;K7EIT4;B4DJF2;P31946 P62258 43 50 YWHAZ;YWHAQ;YWHAH;YWHAG;SFN;YWHAB;YWHAE 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein sigma;14-3-3 protein epsilon;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 2 0.0144 80.231 By MS/MS By MS/MS 1 2 5827100 2885800 2941200 4022 1793;751;1663;482 4495;4496 10116;10117;10118 9293;9294;9295 9295 912 3 NLNNSNLFSPVNRDSENLASPSEYPENGER SIKKLVLKNLNNSNLF EYPENGERFSFLSKPV K N L E R F 1 2 7 1 0 0 4 1 0 0 3 0 0 1 3 5 0 0 1 1 0 0 30 1 3362.54 P52948 P52948 604 633 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 3 0.0030811 49.094 By MS/MS By MS/MS 2 2 84798000 41511000 43287000 4023 1759 4497;4498 10119;10120;10121;10122 9296;9297 9297 3318;3319;3320;3321 2 NLQEAEEWYK QYESVAAKNLQEAEEW QEAEEWYKSKFADLSE K N L Y K S 1 0 1 0 0 1 3 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 10 0 1308.5986 P08670;B0YJC4;Q5JVS8;B0YJC5;H7C5W5;F8W835;P41219 P08670 283 292 VIM;PRPH Vimentin;Peripherin yes no 2 0.003029 97.635 By MS/MS By MS/MS 1 1 5881400 2871000 3010400 4024 1546 4499 10123;10124 9298;9299 9299 2 NLQPLMRSPISR PPRPLIQRNLQPLMRS LMRSPISRQQDPLMIP R N L S R Q 0 2 1 0 0 1 0 0 0 1 2 0 1 0 2 2 0 0 0 0 0 0 12 1 1410.7766 Q7Z6E9;H3BSK8 Q7Z6E9 353 364 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2;3 1.1628E-06 122.97 By MS/MS By MS/MS 3 3 57941000 31081000 26860000 4025 2224 4500;4501 10125;10126;10127;10128;10129;10130 9300;9301;9302;9303;9304;9305 9303 299 4453 6 NLQTVNVDEN YVPVTTFKNLQTVNVD QTVNVDEN________ K N L E N - 0 0 3 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1144.536 P62899 P62899 116 125 RPL31 60S ribosomal protein L31 yes yes 2 4.5837E-40 193.1 By MS/MS By MS/MS 1 1 33046000 15950000 17096000 4026 1804 4502 10131;10132 9306;9307 9307 2 NLQTYLQEEDTRMQQADR NLKIQVLKNLQTYLQE TRMQQADRDWKKVAKQ K N L D R D 1 2 1 2 0 4 2 0 0 0 2 0 1 0 0 0 2 0 1 0 0 0 18 1 2238.0335 Q6KC79 Q6KC79 2236 2253 NIPBL Nipped-B-like protein yes yes 3 0.027665 44.567 By MS/MS 1 0 0 0 4027 2147 4503 10133 9308 9308 1 NLQYYDISAK SIVFHRKKNLQYYDIS QYYDISAKSNYNFEKP K N L A K S 1 0 1 1 0 1 0 0 0 1 1 1 0 0 0 1 0 0 2 0 0 0 10 0 1213.5979 B5MDF5;J3KQE5;P62826;F5H018;B4DV51 B5MDF5 160 169 RAN GTP-binding nuclear protein Ran yes no 2 0.0024437 104.01 By MS/MS By MS/MS 1 1 12670000 6509600 6160400 4028 506 4504 10134;10135 9309;9310 9310 2 NLSEGNNANYTEYVATR LCDFGFARNLSEGNNA YTEYVATRWYRSPELL R N L T R W 2 1 4 0 0 0 2 1 0 0 1 0 0 0 0 1 2 0 2 1 0 0 17 0 1914.8708 A0A1B0GTX4;A0A096LNR9;A0A1B0GUM4;O76039 A0A1B0GTX4 159 175 CDKL5 Cyclin-dependent kinase-like 5 yes no 2 0.0047284 74.392 By MS/MS By MS/MS 1 1 7132800 4227100 2905700 4029 154 4505 10136;10137 9311;9312 9312 6259;7185 2 NLSESPVITK KTSTNSSKNLSESPVI SESPVITKAKEGCQSD K N L T K A 0 0 1 0 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 1 0 0 10 0 1086.5921 F5GXF5;E7ETD6;Q12830 F5GXF5 1164 1173 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.0021972 90.614 By MS/MS By MS/MS 1 1 15337000 9250800 6085900 4030 736 4506 10138;10139 9313;9314 9313 1322 2 NLSFNELYPSGTLK QDSGEEARNLSFNELY LYPSGTLKLQYNFDTI R N L L K L 0 0 2 0 0 0 1 1 0 0 3 1 0 1 1 2 1 0 1 0 0 0 14 0 1581.8039 Q8WYP5 Q8WYP5 1539 1552 AHCTF1 Protein ELYS yes yes 2 7.2711E-06 119.87 By MS/MS By MS/MS 1 1 12266000 6972500 5294000 4031 2417 4507 10140;10141 9315;9316 9315 4854 2 NLSGSTLYPVSNIPR SPAVHRQRNLSGSTLY YPVSNIPRSNVTPFGS R N L P R S 0 1 2 0 0 0 0 1 0 1 2 0 0 0 2 3 1 0 1 1 0 0 15 0 1616.8522 H0YLX2;Q2KHR2 H0YLX2 1079 1093 RFX7 DNA-binding protein RFX7 yes no 2 0.00035362 99.566 By MS/MS By MS/MS 1 1 20567000 10741000 9826000 4032 1094 4508 10142;10143 9317;9318 9317 2013 2 NLSLSSSTPPLPSPGR ETPRLPQRNLSLSSST PPLPSPGRSGPLPPPP R N L G R S 0 1 1 0 0 0 0 1 0 0 3 0 0 0 4 5 1 0 0 0 0 0 16 0 1608.8471 E9PB87;O43516 E9PB87 338 353 WIPF1 WAS/WASL-interacting protein family member 1 yes no 2 0.00018156 98.507 By MS/MS By MS/MS 1 1 11522000 5327300 6195000 4033 758 4509 10144;10145 9319;9320;9321 9321 1382 3 NLSNEELTK HSPVQMNRNLSNEELT LSNEELTKSKPSAPPN R N L T K S 0 0 2 0 0 0 2 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 9 0 1046.5244 Q0JRZ9 Q0JRZ9 401 409 FCHO2 F-BAR domain only protein 2 yes yes 2 0.012991 70.728 By MS/MS By MS/MS 1 1 93627000 52358000 41268000 4034 1872 4510 10146;10147 9322;9323 9322 3547 2 NLSPGAVESDVR DISGLRKKNLSPGAVE GAVESDVRGITGVDLF K N L V R G 1 1 1 1 0 0 1 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 12 0 1242.6204 P53621 P53621 171 182 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 1.663E-05 119.77 By MS/MS By MS/MS 1 1 18084000 9247400 8836500 4035 1762 4511 10148;10149 9324;9325;9326;9327 9325 3327 4 NLSPSFSR LRLMGGFKNLSPSFSR NLSPSFSRPASTIARP K N L S R P 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 3 0 0 0 0 0 0 8 0 906.45593 Q1ED39;H3BNU8 Q1ED39 385 392 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.0099914 89.08 By MS/MS 1 9444600 0 9444600 4036 2024 4512 10150 9328 9328 3956 1 NLSSDEATNPISR GEREISLKNLSSDEAT EATNPISRVLNGNQQV K N L S R V 1 1 2 1 0 0 1 0 0 1 1 0 0 0 1 3 1 0 0 0 0 0 13 0 1402.6688 Q7Z417 Q7Z417 110 122 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 2.0707E-10 138.55 By MS/MS By MS/MS 1 1 26516000 14042000 12474000 4037 2214 4513 10151;10152 9329;9330 9329 4416 2 NLSSVGYQLFKPSLISWLEEEEELSTLPR DVMLENYKNLSSVGYQ EELSTLPRVLQEWKMC K N L P R V 0 1 1 0 0 1 5 1 0 1 6 1 0 1 2 5 1 1 1 1 0 0 29 1 3363.7238 Q96MR9 Q96MR9 145 173 ZNF560 Zinc finger protein 560 yes yes 3 0.019455 45.546 By MS/MS By matching 1 1 5581900 1797100 3784800 4038 2516 4514 10153;10154 9331 9331 5079;5080;5081;7848 0 NLSVKVPATTSD RHITNTRRNLSVKVPA KVPATTSD________ R N L S D - 1 0 1 1 0 0 0 0 0 0 1 1 0 0 1 2 2 0 0 2 0 0 12 1 1230.6456 Q9UJC3 Q9UJC3 717 728 HOOK1 Protein Hook homolog 1 yes yes 2 8.8557E-07 124.48 By MS/MS By MS/MS 2 2 14463000 8242900 6220600 4039 2820 4515 10155;10156;10157;10158 9332;9333;9334;9335;9336 9332 5798;5799 5 NLTANDPSQEYVASEGEEDPEVEFLK LKRNVLGRNLTANDPS DPEVEFLKSLTTKQKQ R N L L K S 2 0 2 2 0 1 6 1 0 0 2 1 0 1 2 2 1 0 1 2 0 0 26 0 2909.3091 Q86X95 Q86X95 189 214 CIR1 Corepressor interacting with RBPJ 1 yes yes 3 0.00019951 61.903 By MS/MS By matching 1 1 34321000 19358000 14963000 4040 2251 4516 10159;10160 9337 9337 4516 1 NLTMSPLHK ETGMALLRNLTMSPLH LTMSPLHKRRQRRGRL R N L H K R 0 0 1 0 0 0 0 0 1 0 2 1 1 0 1 1 1 0 0 0 0 0 9 0 1039.5485 O14686 O14686 1602 1610 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.0045446 87.667 By MS/MS By MS/MS 1 1 14074000 7646200 6428100 4041 1344 4517 10161;10162 9338;9339 9338 2448 2 NLVSPAYCTQESR SDFITENRNLVSPAYC AYCTQESREEIPGGEA R N L S R E 1 1 1 0 1 1 1 0 0 0 1 0 0 0 1 2 1 0 1 1 0 0 13 0 1523.7038 Q9NUQ3 Q9NUQ3 94 106 TXLNG Gamma-taxilin yes yes 2 0.0018779 89.466 By MS/MS By MS/MS 1 1 11686000 6971900 4714200 4042 2736 4518 10163;10164 9340;9341 9340 5599;5600 2 NLVSPAYCTQESREEIPGGEAR SDFITENRNLVSPAYC EIPGGEARTDPPDGQQ R N L A R T 2 2 1 0 1 1 4 2 0 1 1 0 0 0 2 2 1 0 1 1 0 0 22 1 2462.1496 Q9NUQ3 Q9NUQ3 94 115 TXLNG Gamma-taxilin yes yes 3 0.0008547 62.617 By MS/MS By MS/MS 2 2 225850000 118290000 107560000 4043 2736 4519;4520 10165;10166;10167;10168 9342;9343;9344 9342 5599;5600 3 NLVWNAGALHYSDEVEIIQGLTR DRYYRCDRNLVWNAGA EIIQGLTRMPGGRDAL R N L T R M 2 1 2 1 0 1 2 2 1 2 3 0 0 0 0 1 1 1 1 2 0 0 23 0 2597.3238 A0A087X0S5;P12109 A0A087X0S5 83 105 COL6A1 Collagen alpha-1(VI) chain yes no 3 0.0011069 59.618 By MS/MS 1 22902000 22902000 0 4044 133 4521 10169 9345 9345 1 NLYSGDYYR IADFGMSRNLYSGDYY LYSGDYYRIQGRAVLP R N L Y R I 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 3 0 0 0 9 0 1149.5091 Q16832 Q16832 734 742 DDR2 Discoidin domain-containing receptor 2 yes yes 2 0.0012287 101.54 By MS/MS By MS/MS 2 2 13302000 6437800 6864000 4045 2021 4522 10170;10171;10172;10173 9346;9347;9348;9349 9346 3952;7726;7727;7728 4 NMAPSQQSPVR DYVPSPTRNMAPSQQS PSQQSPVRTASVNQRN R N M V R T 1 1 1 0 0 2 0 0 0 0 0 0 1 0 2 2 0 0 0 1 0 0 11 0 1213.5874 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9 H7C3Q7 86 96 ABI2 Abl interactor 2 yes no 2 0.0044103 78.149 By MS/MS 1 6550200 0 6550200 4046 275 4523 10174 9350 9350 493 1 NMDDYEDFDEK EYQEKMGRNMDDYEDF DYEDFDEKHSIYPSEK R N M E K H 0 0 1 4 0 0 2 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 11 0 1419.5136 Q68DH5 Q68DH5 286 296 LMBRD2 LMBR1 domain-containing protein 2 yes yes 2 0.01529 60.102 By MS/MS By MS/MS 1 1 7119100 3688100 3431000 4047 2134 4524 10175;10176 9351;9352 9351 7755 0 NMGGPYGGGNYGPGGSGGSGGYGGR SGNFGGSRNMGGPYGG GSGGYGGRSRY_____ R N M G R S 0 1 2 0 0 0 0 14 0 0 0 0 1 0 2 2 0 0 3 0 0 0 25 0 2188.8981 P22626 P22626 326 350 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2;3 0.0017747 55.984 By MS/MS By MS/MS 2 3 20818000 10868000 9950300 4048 1618 4525 10177;10178;10179;10180;10181 9353;9354;9355 9354 201 2995;7577 3 NMTVEQLLTGSPTSPTVEPEKPTR IKILESLKNMTVEQLL VEPEKPTREKKFLDDI K N M T R E 0 1 1 0 0 1 3 1 0 0 2 1 1 0 4 2 5 0 0 2 0 0 24 1 2611.3163 Q9C0C9;K7ES11 Q9C0C9 826 849 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 3;4 8.2391E-20 114.63 By MS/MS By MS/MS 4 4 201810000 99113000 102700000 4049 2617 4526;4527;4528 10182;10183;10184;10185;10186;10187;10188;10189 9356;9357;9358;9359;9360;9361 9357 347 5314;5315;7038 6 NNLGTPLQK QGISFGIKNNLGTPLQ NLGTPLQKLGVSFSFA K N N Q K L 0 0 2 0 0 1 0 1 0 0 2 1 0 0 1 0 1 0 0 0 0 0 9 0 983.53999 Q9UKJ3 Q9UKJ3 289 297 GPATCH8 G patch domain-containing protein 8 yes yes 2 0.027748 82.261 By matching By MS/MS 1 1 5402700 2604000 2798700 4050 2831 4529 10190;10191 9362 9362 1 NNLKECGLY AVTDVIIKNNLKECGL NLKECGLY________ K N N L Y - 0 0 2 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 1 0 0 0 9 1 1109.5175 P08754 P08754 346 354 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 2 0.0032433 98.458 By MS/MS By MS/MS 1 1 4815700 2768300 2047300 4051 1548 4530 10192;10193 9363;9364 9364 7557 2 NNLPISISSNVSISR SPEIEWFKNNLPISIS SSNVSISRSRNVYSLE K N N S R S 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 5 0 0 0 1 0 0 15 0 1599.858 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42 A0A0A0MRA3 26865 26879 TTN Titin yes no 2 0.025555 51.03 By MS/MS By MS/MS 1 1 0 0 0 4052 173 4531;4532 10194;10195 9365;9366 9366 2 NNLYPHRTAFPSVALK TIEDFQKKNNLYPHRT AFPSVALKGHSLASVF K N N L K G 2 1 2 0 0 0 0 0 1 0 2 1 0 1 2 1 1 0 1 1 0 0 16 1 1826.9792 Q9C0D4 Q9C0D4 467 482 ZNF518B Zinc finger protein 518B yes yes 2 0.029693 41.359 By MS/MS 1 0 0 0 4053 2618 4533 10196 9367 9367 7883 1 NNMTASMFDLSMK EVDIQFMRNNMTASMF SMFDLSMKDKSRNPFG R N N M K D 1 0 2 1 0 0 0 0 0 0 1 1 3 1 0 2 1 0 0 0 0 0 13 0 1488.6411 Q6WKZ4;Q7L804;E7EX40 Q6WKZ4 151 163 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 no no 2 2.1972E-08 128.9 By MS/MS By MS/MS 3 3 17824000 9238500 8585900 4054 2175;752;2202 4534;4535 10197;10198;10199;10200;10201;10202 9368;9369;9370;9371;9372 9369 91;92 1370;1371;4350;6434;6922 5 NNMTASMFDLSMKDK EVDIQFMRNNMTASMF FDLSMKDKSRNPFGKL R N N D K S 1 0 2 2 0 0 0 0 0 0 1 2 3 1 0 2 1 0 0 0 0 0 15 1 1731.763 Q6WKZ4;Q7L804;E7EX40 Q6WKZ4 151 165 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 no no 2;3 3.8709E-09 121.99 By MS/MS By MS/MS 3 3 23721000 13852000 9868600 4055 2175;752;2202 4536;4537 10203;10204;10205;10206;10207;10208 9373;9374;9375;9376;9377 9376 91;92 1370;1371;4350;6434;6922 5 NNPSPPPDSDLER KSRGRGRKNNPSPPPD PPDSDLERVFVWDLDE K N N E R V 0 1 2 2 0 0 1 0 0 0 1 0 0 0 4 2 0 0 0 0 0 0 13 0 1436.6532 E7ESD5;E9PLN6;F2Z2Y1;O95677 E7ESD5 310 322 EYA4 Eyes absent homolog;Eyes absent homolog 4 yes no 2 0.0023623 85.271 By MS/MS By MS/MS 1 1 18109000 8364600 9744300 4056 730 4538 10209;10210 9378;9379;9380 9380 1306 3 NNQSKSANSTLR VRWLLGMKNNQSKSAN KSANSTLRLLSAMLVS K N N L R L 1 1 3 0 0 1 0 0 0 0 1 1 0 0 0 3 1 0 0 0 0 0 12 1 1318.6589 Q29RF7 Q29RF7 851 862 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.030055 46.158 By MS/MS 1 0 0 0 4057 2026 4539 10211 9381 9381 1 NNSFTAPSTVGK TLQNHYYRNNSFTAPS TAPSTVGKRNLSPSQE R N N G K R 1 0 2 0 0 0 0 1 0 0 0 1 0 1 1 2 2 0 0 1 0 0 12 0 1221.599 O95453 O95453 555 566 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.0022907 89.507 By MS/MS By MS/MS 1 1 38215000 19916000 18298000 4058 1490 4540 10212;10213 9382;9383 9382 2762 2 NNSFTAPSTVGKR TLQNHYYRNNSFTAPS APSTVGKRNLSPSQEE R N N K R N 1 1 2 0 0 0 0 1 0 0 0 1 0 1 1 2 2 0 0 1 0 0 13 1 1377.7001 O95453 O95453 555 567 PARN Poly(A)-specific ribonuclease PARN yes yes 2;3 2.8978E-10 141.73 By MS/MS By MS/MS 1 2 38554000 9203100 29351000 4059 1490 4541 10214;10215;10216 9384;9385;9386 9385 2762 3 NNSPPTVGAFGHTR KNRQNAARNNSPPTVG VGAFGHTRCSAFPLEQ R N N T R C 1 1 2 0 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 14 0 1453.7062 F5H1D4;Q86XL3 Q86XL3 660 673 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 no no 3 0.015384 51.939 By MS/MS By matching 1 1 7320800 3907000 3413800 4060 2252;876 4542 10217;10218 9387 9387 1573 1 NNSSGRVPTII LSRRNNNRNNSSGRVP SGRVPTII________ R N N I I - 0 1 2 0 0 0 0 1 0 2 0 0 0 0 1 2 1 0 0 1 0 0 11 1 1156.62 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3 A0A087X1U1 740 750 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 6.2831E-06 130.44 By MS/MS By MS/MS 1 1 5693900 3119100 2574900 4061 142 4543 10219;10220 9388;9389 9389 248 2 NNSSSSFSPHFLGPGVGGAASK SWGSSRRRNNSSSSFS GVGGAASKGCLIRNTR R N N S K G 2 0 2 0 0 0 0 4 1 0 1 1 0 2 2 6 0 0 0 1 0 0 22 0 2103.9974 H7C1D0;H7C1W4;Q93075 H7C1D0 21 42 TATDN2 Putative deoxyribonuclease TATDN2 yes no 3 0.00089224 62.002 By MS/MS By MS/MS 1 1 7132400 4067500 3064900 4062 1169 4544 10221;10222 9390;9391 9391 2123;2124;2125 2 NNSVSGLSVK GDHMASSRNNSVSGLS SVSGLSVKSKNNTKQK R N N V K S 0 0 2 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 0 2 0 0 10 0 1003.5298 Q9UHI6;E9PJ60 Q9UHI6 498 507 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.002217 90.434 By MS/MS By MS/MS 1 1 20456000 12021000 8434200 4063 2814 4545 10223;10224 9392;9393 9392 5780 2 NNTAAETEDDESDGEDRGGGTSGSLR LLGGGSPKNNTAAETE GGTSGSLRRSKRNSDS K N N L R R 2 2 2 4 0 0 4 5 0 0 1 0 0 0 0 3 3 0 0 0 0 0 26 1 2639.0815 Q6KC79 Q6KC79 2661 2686 NIPBL Nipped-B-like protein yes yes 3 0.00018155 62.611 By matching By MS/MS 1 1 17818000 7890000 9927700 4064 2147 4546 10225;10226 9394 9394 4272 1 NNTAAETEDDESDGEDRGGGTSGSLRR LLGGGSPKNNTAAETE GTSGSLRRSKRNSDST K N N R R S 2 3 2 4 0 0 4 5 0 0 1 0 0 0 0 3 3 0 0 0 0 0 27 2 2795.1826 Q6KC79 Q6KC79 2661 2687 NIPBL Nipped-B-like protein yes yes 3 0.001351 56.488 By MS/MS By matching 1 1 15407000 7931700 7475800 4065 2147 4547 10227;10228 9395 9395 4272 1 NNTALQSVSLR QQKAALLKNNTALQSV ALQSVSLRSKTTIRER K N N L R S 1 1 2 0 0 1 0 0 0 0 2 0 0 0 0 2 1 0 0 1 0 0 11 0 1201.6415 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14;V9GZ58 V9GYM8 146 156 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.00070064 105.95 By MS/MS By MS/MS 1 1 2540500 1432200 1108300 4066 2450 4548 10229;10230 9396;9397 9397 4934;4935 2 NNTITTTSSKRK LAGSHGKRNNTITTTS TTTSSKRKNRKNKITP R N N R K N 0 1 2 0 0 0 0 0 0 1 0 2 0 0 0 2 4 0 0 0 0 0 12 2 1349.7263 H0YM23;O75179 H0YM23 1443 1454 ANKRD17 Ankyrin repeat domain-containing protein 17 yes no 2 0.016894 57.567 By matching By MS/MS 1 1 5712400 570060 5142400 4067 1095 4549 10231;10232 9398 9398 1 NNTVIDELPFKSPITK KPTPLDLRNNTVIDEL PFKSPITKSWSRANHT R N N T K S 0 0 2 1 0 0 1 0 0 2 1 2 0 1 2 1 2 0 0 1 0 0 16 1 1814.9778 Q9UQC2 Q9UQC2 532 547 GAB2 GRB2-associated-binding protein 2 yes yes 2 0.001236 79.311 By MS/MS By MS/MS 1 1 4322600 2029800 2292700 4068 2880 4550 10233;10234 9399;9400 9400 6011;7119 2 NNYALNTTATYAEPYRPIQYR RSTLTYQRNNYALNTT PYRPIQYRVQECNYNR R N N Y R V 3 2 3 0 0 1 1 0 0 1 1 0 0 0 2 0 3 0 4 0 0 0 21 1 2518.2241 A0A0D9SF60;Q99569 Q99569 467 487 PKP4 Plakophilin-4 no no 3 1.5274E-05 80.361 By MS/MS By MS/MS 3 3 45808000 23712000 22096000 4069 314;2552 4551;4552 10235;10236;10237;10238;10239;10240 9401;9402;9403;9404;9405;9406;9407 9404 6303;7228;7229;7230;7231 7 NPDDITNEEYGEFYK KTKPIWTRNPDDITNE EEYGEFYKSLTNDWED R N P Y K S 0 0 2 2 0 0 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1832.7741 P07900 P07900 300 314 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 1.9837E-55 186.76 By MS/MS By MS/MS 1 1 15640000 6779700 8860500 4070 1540 4553 10241;10242 9408;9409 9409 2 NPDDITQEEYGEFYK KTKPIWTRNPDDITQE EEYGEFYKSLTNDWED R N P Y K S 0 0 1 2 0 1 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1846.7897 P08238 P08238 292 306 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 1.5588E-35 170.95 By MS/MS 1 10959000 0 10959000 4071 1542 4554 10243 9410 9410 1 NPEDKSPQLSLSPRPASPK LAGSPTPKNPEDKSPQ SPRPASPKAQWPQSED K N P P K A 1 1 1 1 0 1 1 0 0 0 2 2 0 0 5 4 0 0 0 0 0 0 19 2 2047.0698 B9EGQ5;M0QXA7;O95785 B9EGQ5 182 200 WIZ Protein Wiz yes no 3 3.7963E-06 90.378 By MS/MS By MS/MS 2 2 71946000 36231000 35715000 4072 538 4555;4556 10244;10245;10246;10247 9411;9412;9413 9412 983;984 3 NPGFYVEANPMPTFK YGALYEGRNPGFYVEA ANPMPTFKCAVKALFD R N P F K C 1 0 2 0 0 0 1 1 0 0 0 1 1 2 3 0 1 0 1 1 0 0 15 0 1710.8076 P19174 P19174 779 793 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 2 0.00023586 90.697 By MS/MS By MS/MS 1 1 11113000 5553200 5559800 4073 1603 4557 10248;10249 9414;9415 9415 7572 2 NPLPPILGSPTK KLPDFLQRNPLPPILG PILGSPTKAVPSFDFP R N P T K A 0 0 1 0 0 0 0 1 0 1 2 1 0 0 4 1 1 0 0 0 0 0 12 0 1232.7129 O75385 O75385 615 626 ULK1 Serine/threonine-protein kinase ULK1 yes yes 2 2.6591E-08 132.06 By MS/MS By MS/MS 1 1 15534000 8769800 6764000 4074 1437 4558 10250;10251 9416;9417 9417 2647;6628 2 NPPSPRPSQLPVLDR RKRGRPPKNPPSPRPS SQLPVLDRDSTSVLES K N P D R D 0 2 1 1 0 1 0 0 0 0 2 0 0 0 5 2 0 0 0 1 0 0 15 1 1671.9057 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2754 2768 SRCAP Helicase SRCAP yes no 3 0.0052574 59.248 By matching By MS/MS 1 1 7050900 3095800 3955100 4075 208 4559 10252;10253 9418 9418 379 1 NPQMPQYSSPQPGSALSPR QDRGYMQRNPQMPQYS PGSALSPRQPSGGQIH R N P P R Q 1 1 1 0 0 3 0 1 0 0 1 0 1 0 5 4 0 0 1 0 0 0 19 0 2040.9687 O14497;H0Y488;A0A1B0GTU5;A0A087WUV6 O14497 756 774 ARID1A AT-rich interactive domain-containing protein 1A yes no 3 0.012274 48.288 By MS/MS By matching 1 1 11111000 7133400 3978000 4076 1339 4560 10254;10255 9419 9419 2418 1 NPSDSAVHSPFTK SLVQYDLKNPSDSAVH AVHSPFTKRQAFTPSS K N P T K R 1 0 1 1 0 0 0 0 1 0 0 1 0 1 2 3 1 0 0 1 0 0 13 0 1385.6575 F8W726;Q14157 F8W726 419 431 UBAP2L Ubiquitin-associated protein 2-like yes no 2 1.3467E-15 159.09 By matching By MS/MS 1 1 20400000 9414800 10985000 4077 937 4561 10256;10257 9420 9420 1683;6477 1 NPSDSAVHSPFTKR SLVQYDLKNPSDSAVH VHSPFTKRQAFTPSST K N P K R Q 1 1 1 1 0 0 0 0 1 0 0 1 0 1 2 3 1 0 0 1 0 0 14 1 1541.7587 F8W726;Q14157 F8W726 419 432 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.0094569 55.105 By MS/MS 1 12714000 12714000 0 4078 937 4562 10258 9421 9421 1683;6477 1 NPTSSSEFYK PQPNDLYKNPTSSSEF TSSSEFYKAQGPLPNQ K N P Y K A 0 0 1 0 0 0 1 0 0 0 0 1 0 1 1 3 1 0 1 0 0 0 10 0 1158.5193 Q4VCS5 Q4VCS5 210 219 AMOT Angiomotin yes yes 2 0.0026629 85.862 By MS/MS By MS/MS 1 1 1998300 1998300 0 4079 2051 4563 10259;10260 9422;9423 9423 7734 2 NPYLLSEEEDDDVDGDVNVEKNETEPPKGK NHVTMLLRNPYLLSEE ETEPPKGKKKKQKNKQ R N P G K K 0 0 3 5 0 0 6 2 0 0 2 3 0 0 3 1 1 0 1 3 0 0 30 2 3373.5321 G3V5V3;O60524 G3V5V3 370 399 NEMF Nuclear export mediator factor NEMF yes no 3 0.015176 44.6 By MS/MS By matching 1 1 40020000 22442000 17578000 4080 982 4564 10261;10262 9424 9424 1788 1 NQATSATSEKDNDDDQSDKGTYTIELENPNSEEVEAR QEMDKMLKNQATSATS NSEEVEARKMIDKVFG K N Q A R K 3 1 4 5 0 2 6 1 0 1 1 2 0 0 1 4 4 0 1 1 0 0 37 2 4099.785 H0Y2V6;Q5SW79;H0YB66 H0Y2V6 445 481 CEP170 Centrosomal protein of 170 kDa yes no 4 1.9686E-05 58.21 By MS/MS By MS/MS 1 1 37078000 19070000 18008000 4081 1006 4565 10263;10264 9425;9426 9426 1844;1845;6504 2 NQENFSSVLYKENMR PEMERVKRNQENFSSV VLYKENMRKATPTPVT R N Q M R K 0 1 3 0 0 1 2 0 0 0 1 1 1 1 0 2 0 0 1 1 0 0 15 1 1857.8679 A0A087X1N7;P20929;H7C2Z5;H0Y3P5 A0A087X1N7 8253 8267 NEB Nebulin yes no 2 0.024325 40.496 By matching By MS/MS 1 1 10541000 5428500 5112200 4082 140 4566 10265;10266 9427 9427 1 NQGGYGGSSSSSSYGSGR GQYFAKPRNQGGYGGS SSSYGSGRRF______ R N Q G R R 0 1 1 0 0 1 0 6 0 0 0 0 0 0 0 7 0 0 2 0 0 0 18 0 1693.6928 F8W6I7;P09651;H0YH80 F8W6I7 288 305 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 2 0.00011195 82.482 By MS/MS By MS/MS 2 4 19609000 6962700 12646000 4083 933 4567 10267;10268;10269;10270;10271;10272 9428;9429;9430;9431;9432;9433 9430 1671;1672;1673 6 NQHLVQTSWNYMNDSLRTDVFVR LQVLECERNQHLVQTS LRTDVFVRFQPESIAC R N Q V R F 0 2 3 2 0 2 0 0 1 0 2 0 1 1 0 2 2 1 1 3 0 0 23 1 2822.3558 Q96S94 Q96S94 212 234 CCNL2 Cyclin-L2 yes yes 3 0.027823 41.521 By MS/MS 1 0 0 0 4084 2540 4568 10273 9434 9434 1 NQIPRTPENLITEIR GSNPFLTRNQIPRTPE ENLITEIRSSWRKAIE R N Q I R S 0 2 2 0 0 1 2 0 0 3 1 0 0 0 2 0 2 0 0 0 0 0 15 1 1792.9795 Q5VY60;Q7Z4H7;Q5SYF9 Q5VY60 443 457 HAUS6 HAUS augmin-like complex subunit 6 yes no 3 0.00020763 100.54 By MS/MS By MS/MS 1 1 21299000 11549000 9750400 4085 2122 4569 10274;10275 9435;9436;9437 9435 6893 3 NQKNSLSDPNIDR RFIRPSDRNQKNSLSD LSDPNIDRINLVILGK R N Q D R I 0 1 3 2 0 1 0 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 13 1 1499.7328 Q9NRY4;A2RRE5 Q9NRY4 585 597 ARHGAP35;GRLF1 Rho GTPase-activating protein 35 yes no 2;3 0.002581 88.706 By matching By MS/MS 2 2 18505000 9898100 8607300 4086 2725 4570 10276;10277;10278;10279 9438;9439 9438 5569 2 NQKPSQVNGAPGSPTEPAGQK KSPKLQKKNQKPSQVN PTEPAGQKQHQKALPK K N Q Q K Q 2 0 2 0 0 3 1 3 0 0 0 2 0 0 4 2 1 0 0 1 0 0 21 1 2091.0345 Q9BQG0;I3L1L3 Q9BQG0 1255 1275 MYBBP1A Myb-binding protein 1A yes no 2;3 1.1757E-05 85.006 By MS/MS By MS/MS 4 5 83800000 29298000 54502000 4087 2570 4571;4572 10280;10281;10282;10283;10284;10285;10286;10287;10288 9440;9441;9442;9443;9444;9445 9443 27;37 5188 6 NQKPSQVNGAPGSPTEPAGQKQHQK KSPKLQKKNQKPSQVN AGQKQHQKALPKKGVL K N Q Q K A 2 0 2 0 0 5 1 3 1 0 0 3 0 0 4 2 1 0 0 1 0 0 25 2 2612.3055 Q9BQG0;I3L1L3 Q9BQG0 1255 1279 MYBBP1A Myb-binding protein 1A yes no 3;4 1.497E-05 73.796 By MS/MS By MS/MS 2 2 33892000 17842000 16050000 4088 2570 4573 10289;10290;10291;10292 9446;9447;9448 9448 27;37 5188 3 NQKQPGVDSLSPVASLPK SQSASFPRNQKQPGVD SPVASLPKQIFQPSVQ R N Q P K Q 1 0 1 1 0 2 0 1 0 0 2 2 0 0 3 3 0 0 0 2 0 0 18 1 1864.0054 Q9UBW7;A0A087X151 Q9UBW7 295 312 ZMYM2 Zinc finger MYM-type protein 2 yes no 2;3 4.7231E-09 116.71 By MS/MS By MS/MS 2 2 34232000 19223000 15009000 4089 2804 4574 10293;10294;10295;10296 9449;9450;9451;9452;9453 9450 5746;5747 5 NQNIQKPEYSE EEYTEKKKNQNIQKPE IQKPEYSE________ K N Q S E - 0 0 2 0 0 2 2 0 0 1 0 1 0 0 1 1 0 0 1 0 0 0 11 1 1348.6259 Q5QPE8;Q9BQP7 Q5QPE8 254 264 MGME1 Mitochondrial genome maintenance exonuclease 1 yes no 2 0.0053058 80.312 By MS/MS By MS/MS 1 1 7157000 3666200 3490800 4090 2083 4575 10297;10298 9454;9455 9454 4103 2 NQNYLVPSPVLR DGIKARNRNQNYLVPS LVPSPVLRILDHTAFS R N Q L R I 0 1 2 0 0 1 0 0 0 0 2 0 0 0 2 1 0 0 1 2 0 0 12 0 1398.7619 C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6 C9J3R1 81 92 ZNF639 Zinc finger protein 639 yes no 2 0.00012531 114.74 By MS/MS By MS/MS 1 1 6452000 2717900 3734100 4091 544 4576 10299;10300 9456;9457 9457 994 2 NQPGKYSQLVVETIR KRKNSKKKNQPGKYSQ QLVVETIRRLGERNGS K N Q I R R 0 1 1 0 0 2 1 1 0 1 1 1 0 0 1 1 1 0 1 2 0 0 15 1 1730.9315 Q92522 Q92522 43 57 H1FX Histone H1x yes yes 3 0.0067548 58.712 By MS/MS 1 2745100 0 2745100 4092 2419 4577 10301 9458 9458 6982 1 NQSGTMFRPGQK FQNPKRRKNQSGTMFR TMFRPGQKVTLA____ K N Q Q K V 0 1 1 0 0 2 0 2 0 0 0 1 1 1 1 1 1 0 0 0 0 0 12 1 1349.651 A0A0C4DG33;O43933 A0A0C4DG33 1211 1222 PEX1 Peroxisome biogenesis factor 1 yes no 2 0.010681 53.597 By MS/MS 1 3209500 0 3209500 4093 279 4578 10302 9459 9459 27 1 NQSLGQSAPSLTAGLK ASNLVRMRNQSLGQSA PSLTAGLKELSLPRRG R N Q L K E 2 0 1 0 0 2 0 2 0 0 3 1 0 0 1 3 1 0 0 0 0 0 16 0 1570.8315 Q6P0Q8 Q6P0Q8 142 157 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 2 0.0039125 79.837 By MS/MS By MS/MS 1 1 8993500 4979200 4014200 4094 2151 4579 10303;10304 9460;9461 9461 6902 1 NQVEEDAEDSGEADDEEKPEIHKPGQNSFSK EWSQPRFRNQVEEDAE PGQNSFSKSTNSSDVS R N Q S K S 2 0 2 4 0 2 7 2 1 1 0 3 0 1 2 3 0 0 0 1 0 0 31 2 3457.503 O75717 O75717 859 889 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 4 0.0054935 43.936 By MS/MS 1 28872000 28872000 0 4095 1448 4580 10305 9462 9462 2679 1 NQVIPRTPSSFR NFGNTTPRNQVIPRTP PRTPSSFRQPFTPTSR R N Q F R Q 0 2 1 0 0 1 0 0 0 1 0 0 0 1 2 2 1 0 0 1 0 0 12 1 1400.7524 G3V1T4;P57740 G3V1T4 49 60 NUP107 Nuclear pore complex protein Nup107 yes no 2 0.027662 81.338 By MS/MS By matching 1 1 6200600 3321300 2879300 4096 961 4581 10306;10307 9463 9463 1748 1 NQVVSSTNGELNTDDPTAGR RDKMQQSKNQVVSSTN TDDPTAGRSNAPITAP K N Q G R S 1 1 3 2 0 1 1 2 0 0 1 0 0 0 1 2 3 0 0 2 0 0 20 0 2073.9563 H0YBN6 H0YBN6 110 129 CSNK1G3 yes yes 2;3 0.0020664 67.449 By MS/MS By MS/MS 2 2 26145000 13930000 12216000 4097 1053 4582 10308;10309;10310;10311 9464;9465;9466 9464 1957;1958;6524 3 NQYGEVMVRFSTYFFR FDWIRKERNQYGEVMV RFSTYFFRNSWYWLYE R N Q F R N 0 2 1 0 0 1 1 1 0 0 0 0 1 3 0 1 1 0 2 2 0 0 16 1 2042.9673 Q8N119 Q8N119 345 360 MMP21 Matrix metalloproteinase-21 yes yes 2 0.020814 45.077 By MS/MS By matching 1 1 9624600 5650600 3973900 4098 2295 4583 10312;10313 9467 9467 4605;7793 1 NRDLVYV QNTGSEIKNRDLVYV_ KNRDLVYV________ K N R Y V - 0 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 2 0 0 7 1 877.46577 O95835 O95835 1124 1130 LATS1 Serine/threonine-protein kinase LATS1 yes yes 2 0.026804 71.296 By MS/MS By matching 1 1 3899700 1751200 2148500 4099 1504 4584 10314;10315 9468 9468 7545 1 NREEEWDPEYTPK SNNDFQKRNREEEWDP WDPEYTPKSKKYYLHD R N R P K S 0 1 1 1 0 0 4 0 0 0 0 1 0 0 2 0 1 1 1 0 0 0 13 1 1691.7427 Q9Y2W1 Q9Y2W1 864 876 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.00077359 96.096 By MS/MS By matching 1 1 7451000 4564300 2886700 4100 2897 4585 10316;10317 9469 9469 7123 1 NRENEHIFNLGEEDETYGPGESQITAQSR CDPLIMPRNRENEHIF SQITAQSRELLKDSPQ R N R S R E 1 2 3 1 0 2 6 3 1 2 1 0 0 1 1 2 2 0 1 0 0 0 29 1 3319.4978 A0A0U1RQJ2 A0A0U1RQJ2 301 329 yes yes 3 0.00046898 58.47 By matching By MS/MS 1 1 9548500 5732500 3815900 4101 339 4586 10318;10319 9470 9470 6308 1 NRGLKEGMNPSYDEYADSDEDQHDAYLER NAKKLNIKNRGLKEGM QHDAYLERMKEEGKIR K N R E R M 2 2 2 5 0 1 4 2 1 0 2 1 1 0 1 2 0 0 3 0 0 0 29 2 3416.4488 Q08945 Q08945 427 455 SSRP1 FACT complex subunit SSRP1 yes yes 4 4.7351E-05 65.387 By MS/MS By MS/MS 2 2 51221000 24635000 26585000 4102 1866 4587;4588 10320;10321;10322;10323 9471;9472 9471 241 3510 2 NRHSPDHPGMGSSQASSSSSLR KKEKKKKKNRHSPDHP ASSSSSLR________ K N R L R - 1 2 1 1 0 1 0 2 2 0 1 0 1 0 2 8 0 0 0 0 0 0 22 1 2281.0254 J3KR33;A0JLT2 J3KR33 223 244 MED19 Mediator of RNA polymerase II transcription subunit 19 yes no 3;4 0.0051969 50.47 By MS/MS By MS/MS 2 2 33609000 16085000 17524000 4103 388 4589 10324;10325;10326;10327 9473;9474;9475 9473 740;741 3 NRILENSKSQTDK LNRELQERNRILENSK NSKSQTDKDYYQLQAI R N R D K D 0 1 2 1 0 1 1 0 0 1 1 2 0 0 0 2 1 0 0 0 0 0 13 2 1531.7954 Q13464;A0A0U1RQV4 Q13464 589 601 ROCK1 Rho-associated protein kinase 1 yes no 3 0.028949 46.319 By MS/MS 1 2404300 0 2404300 4104 1918 4590 10328 9476 9476 0 NRKEGGGDSSASSPTEEEQEQGEIGACSDEGTAQEGK LSGLSFKRNRKEGGGD EGTAQEGKAAATPESQ R N R G K A 3 1 1 2 1 3 8 7 0 1 0 2 0 0 1 5 2 0 0 0 0 0 37 2 3810.5995 P49006 P49006 108 144 MARCKSL1 MARCKS-related protein yes yes 4 9.1798E-05 53.878 By MS/MS By MS/MS 1 1 27271000 14912000 12359000 4105 1721 4591 10329;10330 9477;9478 9477 3223;3224 2 NRPDYVSEEEEDDEDFETAVK PPTFFCYKNRPDYVSE EDFETAVKKLNGKLYL K N R V K K 1 1 1 4 0 0 6 0 0 0 0 1 0 1 1 1 1 0 1 2 0 0 21 1 2515.0511 P49792 P49792 2662 2682 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2;3 3.4582E-09 101.3 By MS/MS By MS/MS 2 2 57474000 33055000 24419000 4106 1730 4592 10331;10332;10333;10334 9479;9480;9481 9480 3264 3 NRPTSISWDGLDSGK VLTPTQVKNRPTSISW WDGLDSGKLYTLVLTD K N R G K L 0 1 1 2 0 0 0 2 0 1 1 1 0 0 1 3 1 1 0 0 0 0 15 1 1631.7903 P30086 P30086 48 62 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 3 0.017619 50.957 By MS/MS By matching 1 1 4177000 2454900 1722100 4107 1652 4593 10335;10336 9482 9482 1 NRSAEEGELAESK LKAKLRPRNRSAEEGE EGELAESKSSQKESAV R N R S K S 2 1 1 0 0 0 4 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 13 1 1418.6638 Q9C0C2 Q9C0C2 1664 1676 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.00011871 116.58 By MS/MS By MS/MS 1 1 22202000 10108000 12094000 4108 2615 4594 10337;10338 9483;9484 9484 5302 2 NRSGVRMFK LTDSKQGKNRSGVRMF RSGVRMFKDGVVAHAC K N R F K D 0 2 1 0 0 0 0 1 0 0 0 1 1 1 0 1 0 0 0 1 0 0 9 2 1093.5815 E9PLZ0;H0YEW9;E9PQ18;Q6ZNB5 E9PLZ0 105 113 Putative short transient receptor potential channel 2-like protein yes no 2 0.0036577 70.028 By MS/MS 1 0 0 0 4109 823 4595 10339 9485 9485 99 1470 1 NRTPSDVKELVLDNSR RRIHLELRNRTPSDVK ELVLDNSRSNEGKLEG R N R S R S 0 2 2 2 0 0 1 0 0 0 2 1 0 0 1 2 1 0 0 2 0 0 16 2 1841.9595 P39687;H0YN26;H7BZ09 P39687 13 28 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 3 0.0048439 62.648 By MS/MS By MS/MS 1 1 10968000 4638000 6330300 4110 1681 4596 10340;10341 9486;9487 9487 3095 2 NRVNMTYEKMSR ARLWGNHKNRVNMTYE MTYEKMSRALRHYYKL K N R S R A 0 2 2 0 0 0 1 0 0 0 0 1 2 0 0 1 1 0 1 1 0 0 12 2 1527.7286 Q9Y603 Q9Y603 270 281 ETV7 Transcription factor ETV7 yes yes 2 0.0066586 59.116 By MS/MS By matching 1 1 9057500 4920000 4137500 4111 2942 4597 10342;10343 9488 9488 386 6108 1 NRYLNVVLNTLKR AYDCSPNKNRYLNVVL VVLNTLKRLKGLTPSS K N R K R L 0 2 3 0 0 0 0 0 0 0 3 1 0 0 0 0 1 0 1 2 0 0 13 2 1601.9366 Q8IX06 Q8IX06 337 349 REXO1L1P Putative exonuclease GOR yes yes 3 0.026363 42.095 By MS/MS 1 102230000 0 102230000 4112 2275 4598 10344 9489 9489 7788 0 NSADDEELTNDSLTLSQSK KKSKVLSRNSADDEEL SLTLSQSKSNEDSLIL R N S S K S 1 0 2 3 0 1 2 0 0 0 3 1 0 0 0 4 2 0 0 0 0 0 19 0 2065.9288 A0A0U1RRH6;O94880 A0A0U1RRH6 279 297 PHF14 PHD finger protein 14 yes no 2 2.2977E-14 128.1 By MS/MS 1 7195100 7195100 0 4113 351 4599 10345 9490 9490 647 1 NSASATTPLSGNSSR NYTRPSSRNSASATTP PLSGNSSRRGSGDTSS R N S S R R 2 1 2 0 0 0 0 1 0 0 1 0 0 0 1 5 2 0 0 0 0 0 15 0 1448.6855 C9JSU1;Q9Y608 C9JSU1 79 93 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2 0.00049726 87.429 By MS/MS By MS/MS 1 1 9538900 5054500 4484400 4114 608 4600 10346;10347 9491;9492 9491 1111;1112 2 NSATCHSEDSDLEID VLVLTSVRNSATCHSE EDSDLEID________ R N S I D - 1 0 1 3 1 0 2 0 1 1 1 0 0 0 0 3 1 0 0 0 0 0 15 0 1691.6581 Q13371 Q13371 287 301 PDCL Phosducin-like protein yes yes 2 0.00152 133.87 By MS/MS By MS/MS 2 2 18490000 10244000 8246600 4115 1912 4601;4602 10348;10349;10350;10351 9493;9494;9495 9494 3668;3669;6792 3 NSATFKSFEDR SRKLGDMRNSATFKSF TFKSFEDRVGTIKSKV R N S D R V 1 1 1 1 0 0 1 0 0 0 0 1 0 2 0 2 1 0 0 0 0 0 11 1 1300.6048 O43399 O43399 160 170 TPD52L2 Tumor protein D54 yes yes 2 6.3075E-06 130.47 By MS/MS By MS/MS 1 1 121970000 70223000 51750000 4116 1383 4603 10352;10353 9496;9497 9496 2533 2 NSCNVLHPQSPNNSNR QKPVGEMKNSCNVLHP QSPNNSNRQGCKVPFG K N S N R Q 0 1 5 0 1 1 0 0 1 0 1 0 0 0 2 3 0 0 0 1 0 0 16 0 1836.8285 Q7Z333 Q7Z333 1654 1669 SETX Probable helicase senataxin yes yes 2;3 0.0087178 54.393 By MS/MS By MS/MS 2 2 14488000 6975900 7511900 4117 2209 4604 10354;10355;10356;10357 9498;9499;9500;9501 9498 4406 4 NSDDAPWSPK KSRPKKKKNSDDAPWS DDAPWSPKARVTPTLP K N S P K A 1 0 1 2 0 0 0 0 0 0 0 1 0 0 2 2 0 1 0 0 0 0 10 0 1115.4884 Q9UPP1;H0Y3N9;H0Y589 Q9UPP1 873 882 PHF8 Histone lysine demethylase PHF8 yes no 2 4.2643E-09 161.87 By MS/MS By MS/MS 1 1 26890000 15733000 11157000 4118 2868 4605 10358;10359 9502;9503;9504;9505 9503 5910 4 NSDLLTSPDVGLLK LKPHLRAKNSDLLTSP SPDVGLLKLASPELER K N S L K L 0 0 1 2 0 0 0 1 0 0 4 1 0 0 1 2 1 0 0 1 0 0 14 0 1470.793 P05412 P05412 57 70 JUN Transcription factor AP-1 yes yes 2 3.2533E-35 180.56 By MS/MS By MS/MS 1 1 54030000 29820000 24210000 4119 1525 4606 10360;10361 9506;9507 9507 2810;6654 2 NSDLLTSPDVGLLKLASPELER LKPHLRAKNSDLLTSP LASPELERLIIQSSNG K N S E R L 1 1 1 2 0 0 2 1 0 0 6 1 0 0 2 3 1 0 0 1 0 0 22 1 2366.2693 P05412 P05412 57 78 JUN Transcription factor AP-1 yes yes 3 1.7674E-05 78.418 By MS/MS By MS/MS 1 1 15917000 13053000 2863400 4120 1525 4607 10362;10363 9508;9509 9509 2810;2811;6654 2 NSELARTDPVR QTSICRERNSELARTD LARTDPVRPFISGHVA R N S V R P 1 2 1 1 0 0 1 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 11 1 1256.6473 F8VWT9;J3KPF0;Q9Y4D8 F8VWT9 1928 1938 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes no 2 0.018484 63.727 By MS/MS By matching 1 1 4253100 1747500 2505600 4121 923 4608 10364;10365 9510 9510 0 NSEQLRRVENSISR GLAVLPDKNSEQLRRV RVENSISRANTFLGAK K N S S R A 0 3 2 0 0 1 2 0 0 1 1 0 0 0 0 3 0 0 0 1 0 0 14 2 1686.8761 CON__P01030;CON__ENSEMBL:ENSBTAP00000007350 CON__P01030 1158 1171 yes no 2 0.0032133 72.662 By MS/MS 1 8423000 8423000 0 + 4122 629 4609 10366 9511 9511 1148;1149 0 NSESESNKVAAETQSPSLFGSTK QQHGNSGRNSESESNK PSLFGSTKLQQESTFL R N S T K L 2 0 2 0 0 1 3 1 0 0 1 2 0 1 1 6 2 0 0 1 0 0 23 1 2397.1296 Q9UKX7 Q9UKX7 207 229 NUP50 Nuclear pore complex protein Nup50 yes yes 3 3.4152E-13 94.671 By MS/MS By MS/MS 1 1 204460000 116900000 87558000 4123 2838 4610 10367;10368 9512;9513;9514;9515 9514 5839;5840 4 NSFLGSPR RARLNSIKNSFLGSPR NSFLGSPRFHRRKLQV K N S P R F 0 1 1 0 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 8 0 876.44537 Q8IWQ3;H0YES6;J3KNK0;Q8TDC3 Q8IWQ3 484 491 BRSK2;BRSK1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 yes no 2 0.012138 84.31 By MS/MS By MS/MS 1 1 6895000 3823300 3071700 4124 2270 4611 10369;10370 9516;9517 9516 4557 2 NSFLYAR TSIVSAGRNSFLYARS RNSFLYARSCQNQWPE R N S A R S 1 1 1 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 0 0 0 7 0 869.43955 Q8TED9 Q8TED9 539 545 AFAP1L1 Actin filament-associated protein 1-like 1 yes yes 2 0.0031081 110.63 By MS/MS By MS/MS 1 1 3823100 2132100 1691000 4125 2386 4612 10371;10372 9518;9519 9519 7813 2 NSGSFPSPSISPR AIPLQSPRNSGSFPSP PSPSISPR________ R N S P R - 0 1 1 0 0 0 0 1 0 1 0 0 0 1 3 5 0 0 0 0 0 0 13 0 1331.647 Q9ULD2 Q9ULD2 1258 1270 MTUS1 Microtubule-associated tumor suppressor 1 yes yes 2 0.0020257 88.187 By MS/MS 1 3133500 3133500 0 4126 2841 4613 10373 9520 9520 5844 1 NSIFHDIDGSVTGYKDAYVGRMDNYLIR DCEMDGDKNSIFHDID RMDNYLIRHPSCVNVS K N S I R H 1 2 2 4 0 0 0 3 1 3 1 1 1 1 0 2 1 0 3 2 0 0 28 2 3218.5455 H3BLX9;Q9UHN6 H3BLX9 48 75 TMEM2 Transmembrane protein 2 yes no 3 0.012955 41.423 By MS/MS 1 7792100 7792100 0 4127 1110 4614 10374 9521 9521 2037;7458;7459 1 NSILAQVLDQSAR ________________ QVLDQSARARLSNLAL R N S A R A 2 1 1 1 0 2 0 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 13 0 1413.7576 K7EQA1;O14737;K7ESJ4 K7EQA1 3 15 PDCD5 Programmed cell death protein 5 yes no 2 0.010231 63.091 By MS/MS By matching 1 1 1269200 637260 631900 4128 1285 4615 10375;10376 9522 9522 0 NSITLTNLTPGTEYVVSIVALNGR EDRVPHSRNSITLTNL SIVALNGREESPLLIG R N S G R E 1 1 3 0 0 0 1 2 0 2 3 0 0 0 1 2 4 0 1 3 0 0 24 0 2531.3595 P02751;H0Y7Z1 P02751 1411 1434 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 2;3 5.0194E-25 121.03 By MS/MS By MS/MS 2 2 25368000 12084000 13284000 4129 1518 4616 10377;10378;10379;10380 9523;9524;9525;9526 9525 11 4 NSKPSYSDIAANPK EEQFERERNSKPSYSD SDIAANPKVLKWMTEL R N S P K V 2 0 2 1 0 0 0 0 0 1 0 2 0 0 2 3 0 0 1 0 0 0 14 1 1490.7365 Q9NYF5 Q9NYF5 592 605 FAM13B Protein FAM13B yes yes 2 0.027659 43.297 By MS/MS 1 0 0 0 4130 2758 4617 10381 9527 9527 7915 1 NSKSPEEHLEEMMK PLKVKNSKNSKSPEEH EHLEEMMKMMSPNKLH K N S M K M 0 0 1 0 0 0 4 0 1 0 1 2 2 0 1 2 0 0 0 0 0 0 14 1 1687.7546 Q9UIG0 Q9UIG0 358 371 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 3 0.0012952 77.633 By MS/MS By MS/MS 1 1 6483100 3312300 3170800 4131 2817 4618 10382;10383 9528;9529 9528 5790 2 NSKYEYDPDISPPR ASHLSFPKNSKYEYDP DPDISPPRKKQAKSHF K N S P R K 0 1 1 2 0 0 1 0 0 1 0 1 0 0 3 2 0 0 2 0 0 0 14 1 1679.7791 Q9BRD0;H7C462 Q9BRD0 315 328 BUD13 BUD13 homolog yes no 3 0.0050128 62.589 By MS/MS By MS/MS 1 1 2097000 2097000 0 4132 2571 4619 10384;10385 9530;9531 9530 5197 2 NSLDASRPAGLSPTLTPGER EQPLALTKNSLDASRP PTLTPGERQQVGLCLG K N S E R Q 2 2 1 1 0 0 1 2 0 0 3 0 0 0 3 3 2 0 0 0 0 0 20 1 2038.0443 F8W708;E7ERW0;E7EQU6;E7EWF5;A0A075B6E4;A0A0A6YYI5;G5E9M7;Q14135;G5E9M9 F8W708 138 157 VGLL4 Transcription cofactor vestigial-like protein 4 yes no 3 0.0098574 49.708 By MS/MS By MS/MS 1 1 11115000 6347600 4767200 4133 5 4620 10386;10387 9532;9533 9533 7;6217 2 NSLESISSIDR FAAGIGHRNSLESISS ESISSIDRELSPEGPG R N S D R E 0 1 1 1 0 0 1 0 0 2 1 0 0 0 0 4 0 0 0 0 0 0 11 0 1219.6044 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1138 1148 SCRIB Protein scribble homolog yes no 2 0.022923 60.901 By matching By MS/MS 1 1 10664000 5069600 5594200 4134 322 4621 10388;10389 9534 9534 1 NSLLAGGDDDTMSVISGISSR WLPLMSYRNSLLAGGD VISGISSRGSTVRSKK R N S S R G 1 1 1 3 0 0 0 3 0 2 2 0 1 0 0 5 1 0 0 1 0 0 21 0 2093.9899 Q8N3U4 Q8N3U4 1046 1066 STAG2 Cohesin subunit SA-2 yes yes 2;3 5.8568E-19 125.75 By MS/MS By MS/MS 8 7 93026000 54531000 38495000 4135 2307 4622;4623;4624;4625 10390;10391;10392;10393;10394;10395;10396;10397;10398;10399;10400;10401;10402;10403;10404 9535;9536;9537;9538;9539;9540;9541;9542;9543;9544;9545;9546;9547 9545 311 4631;4632;4633;4634 12 NSLPASPAHQLSSSPR PLLLAQPRNSLPASPA HQLSSSPRLGGAAQGP R N S P R L 2 1 1 0 0 1 0 0 1 0 2 0 0 0 3 5 0 0 0 0 0 0 16 0 1647.8329 Q8TEK3 Q8TEK3 996 1011 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 0.0059177 63.662 By MS/MS By MS/MS 2 2 14758000 8774200 5984100 4136 2388 4626;4627 10405;10406;10407;10408 9548;9549;9550 9548 4774;4775 3 NSLRVEGDNIYVR LQLIEGKKNSLRVEGD EGDNIYVRHSNLMLEE K N S V R H 0 2 2 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 1 2 0 0 13 1 1533.79 O43491;H0Y5B0;E9PMV8;E9PPC9;Q6ZSX4 O43491 613 625 EPB41L2 Band 4.1-like protein 2 yes no 2;3 6.9925E-11 137.01 By MS/MS By MS/MS 2 1 163480000 131470000 32007000 4137 1387 4628 10409;10410;10411 9551;9552;9553;9554 9553 2542;7520 4 NSLTGEEGQLAR RRAGALRRNSLTGEEG GEEGQLARVSNWPLYC R N S A R V 1 1 1 0 0 1 2 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 12 0 1273.6262 Q9BX95 Q9BX95 111 122 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 2 0.0025115 88.075 By MS/MS By MS/MS 1 1 9609100 5394400 4214600 4138 2596 4629 10412;10413 9555;9556 9556 5257;7031 2 NSLYDMAR SQASAAARNSLYDMAR NSLYDMARYEREQYAD R N S A R Y 1 1 1 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 0 8 0 968.43857 Q9BWF3;E9PB51;Q9BQ04 Q9BWF3 342 349 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 2 0.0091823 77.318 By MS/MS By MS/MS 1 1 7817000 4406600 3410300 4139 2591;2568 4630 10414;10415 9557;9558 9557 7868 2 NSNFSVQHPSSTSPTEK KSRFGKKRNSNFSVQH SSTSPTEKCQDGIMKK R N S E K C 0 0 2 0 0 1 1 0 1 0 0 1 0 1 2 5 2 0 0 1 0 0 17 0 1845.8493 Q03468 Q03468 1336 1352 ERCC6 DNA excision repair protein ERCC-6 yes yes 3 0.0069194 54.812 By MS/MS By MS/MS 1 1 4968900 2796200 2172700 4140 1848 4631 10416;10417 9559;9560 9559 3477 2 NSNSPPSPSSMNQR QVHSTTRRNSNSPPSP SPSSMNQRRLGPREVG R N S Q R R 0 1 3 0 0 1 0 0 0 0 0 0 1 0 3 5 0 0 0 0 0 0 14 0 1501.658 Q7Z5L9 Q7Z5L9 454 467 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 5.6779E-27 167.92 By MS/MS By MS/MS 2 2 64391000 36574000 27817000 4141 2221 4632;4633 10418;10419;10420;10421 9561;9562;9563;9564;9565;9566;9567;9568;9569;9570 9561 4443;4444;4445 10 NSNYCLPSYTAYK NMNNRNVKNSNYCLPS LPSYTAYKNYDYSEPG K N S Y K N 1 0 2 0 1 0 0 0 0 0 1 1 0 0 1 2 1 0 3 0 0 0 13 0 1579.6977 Q9Y4E8 Q9Y4E8 260 272 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 0.0060643 63.727 By matching By MS/MS 1 1 7094800 3781300 3313400 4142 2919 4634 10422;10423 9571 9571 7956 0 NSPEDLGLSLTGDSCK KTSEIEPKNSPEDLGL SLTGDSCKLMLSTSEY K N S C K L 0 0 1 2 1 0 1 2 0 0 3 1 0 0 1 3 1 0 0 0 0 0 16 0 1691.7672 Q12888;A6NNK5;C9JXV0 Q12888 499 514 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.00018262 99.044 By MS/MS By MS/MS 1 1 20113000 10486000 9626500 4143 1882 4635 10424;10425 9572;9573 9572 3580 2 NSPGSQVASNPR TPHALGSRNSPGSQVA SQVASNPRQAAYEMRM R N S P R Q 1 1 2 0 0 1 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 12 0 1212.5847 Q9H0D6 Q9H0D6 447 458 XRN2 5-3 exoribonuclease 2 yes yes 2 0.00014795 113.69 By MS/MS By MS/MS 2 1 24681000 16160000 8520500 4144 2626 4636 10426;10427;10428 9574;9575;9576;9577 9576 5329;5330 4 NSPNNISGISNPPGTPR GDIDGLPKNSPNNISG SNPPGTPRDDGELGGN K N S P R D 0 1 4 0 0 0 0 2 0 2 0 0 0 0 4 3 1 0 0 0 0 0 17 0 1720.8493 Q9NW25;A0A087WVT6;Q9BWW4 Q9NW25 236 252 SSBP3 Single-stranded DNA-binding protein 3 yes no 2 2.5183E-05 98.582 By MS/MS By MS/MS 1 1 18452000 11523000 6928900 4145 66 4637 10429;10430 9578;9579 9579 114;6230 2 NSQEDSEDSEDKDVK KNKRRSGKNSQEDSED DSEDKDVKTKKDDSHS K N S V K T 0 0 1 4 0 1 3 0 0 0 0 2 0 0 0 3 0 0 0 1 0 0 15 1 1723.702 Q9H1E3 Q9H1E3 53 67 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 2.7134E-44 175.26 By MS/MS By MS/MS 7 8 77131000 30505000 46626000 4146 2637 4638;4639 10431;10432;10433;10434;10435;10436;10437;10438;10439;10440;10441;10442;10443;10444;10445 9580;9581;9582;9583;9584;9585;9586;9587;9588;9589;9590;9591;9592;9593;9594;9595 9581 5377;5378 16 NSQPHSPTSSLTSGGSLPLLQSPPSTR ISLPLSARNSQPHSPT LQSPPSTRLSPARHPL R N S T R L 0 1 1 0 0 2 0 2 1 0 4 0 0 0 5 8 3 0 0 0 0 0 27 0 2732.3729 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 304 330 AMOT Angiomotin yes no 3 1.6793E-23 111.33 By MS/MS By MS/MS 3 3 578530000 307860000 270670000 4147 2051 4640;4641 10446;10447;10448;10449;10450;10451 9596;9597;9598;9599;9600;9601;9602;9603;9604 9600 4025;4026;4027;4028;4029;6863;6864 9 NSQPVNPKHSR QASLTTFKNSQPVNPK PVNPKHSRRSEKKSNH K N S S R R 0 1 2 0 0 1 0 0 1 0 0 1 0 0 2 2 0 0 0 1 0 0 11 1 1262.648 H7BZN8;Q75T13 H7BZN8 47 57 PGAP1 GPI inositol-deacylase yes no 2 0.0020213 88.803 By MS/MS 1 21316000 0 21316000 4148 1162 4642 10452 9605 9605 2110 1 NSQSFDSSLHGAGNGISR ISSPVTVRNSQSFDSS GAGNGISRIQSCIPSP R N S S R I 1 1 2 1 0 1 0 3 1 1 1 0 0 1 0 5 0 0 0 0 0 0 18 0 1832.8402 X6RGK9;B7Z326;A0A0C4DFN6;A0A0A0MSS3;Q8ND83 X6RGK9 165 182 SLAIN1 SLAIN motif-containing protein 1 yes no 2 0.0018755 70.412 By MS/MS By matching 1 1 10991000 5307700 5683200 4149 224 4643 10453;10454 9606 9606 407 1 NSSEASSGDFLDLK ESSGLQRRNSSEASSG SGDFLDLKGEGDIHEN R N S L K G 1 0 1 2 0 0 1 1 0 0 2 1 0 1 0 4 0 0 0 0 0 0 14 0 1468.6682 J3KSH8;J3KT51;Q9UK76 J3KSH8 40 53 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 2 9.5234E-05 112.12 By matching By MS/MS 1 1 7225800 4299000 2926800 4150 1242 4644 10455;10456 9607 9607 2251 1 NSSEKLPTELSKEEPSTK SKVTLEARNSSEKLPT SKEEPSTKNTTADKLA R N S T K N 0 0 1 0 0 0 4 0 0 0 2 3 0 0 2 4 2 0 0 0 0 0 18 2 2003.0059 P38432 P38432 270 287 COIL Coilin yes yes 3 0.013784 50.966 By MS/MS By matching 1 1 16714000 10162000 6552200 4151 1679 4645 10457;10458 9608 9608 3094 1 NSSLGSPSNLCGSPPGSIR DLSALLCRNSSLGSPS GSPPGSIRKPPNLEGI R N S I R K 0 1 2 0 1 0 0 3 0 1 2 0 0 0 3 6 0 0 0 0 0 0 19 0 1885.8952 Q9C0B0 Q9C0B0 373 391 UNK RING finger protein unkempt homolog yes yes 2;3 4.0403E-06 87.24 By MS/MS By MS/MS 2 2 27459000 15302000 12156000 4152 2613 4646 10459;10460;10461;10462 9609;9610;9611 9609 5287;5288 3 NSSLLSFDNEDENE KNSQKQIKNSSLLSFD FDNEDENE________ K N S N E - 0 0 3 2 0 0 3 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 14 0 1611.6536 Q96AT1 Q96AT1 141 154 KIAA1143 Uncharacterized protein KIAA1143 yes yes 2 1.2799E-45 185.95 By MS/MS By MS/MS 2 2 76395000 40386000 36010000 4153 2458 4647 10463;10464;10465;10466 9612;9613;9614;9615 9613 4948 4 NSSMDEEIENPYWSVR DVFRYRQRNSSMDEEI ENPYWSVRALVQQYEG R N S V R A 0 1 2 1 0 0 3 0 0 1 0 0 1 0 1 3 0 1 1 1 0 0 16 0 1954.8367 Q155Q3 Q155Q3 184 199 DIXDC1 Dixin yes yes 2 0.001248 76.533 By MS/MS By MS/MS 1 1 7238100 3805400 3432700 4154 1996 4648 10467;10468 9616;9617 9617 3895;3896 2 NSSNTSVGSPSNTIGR KLLHNHLKNSSNTSVG SPSNTIGRTPSRHTSS K N S G R T 0 1 3 0 0 0 0 2 0 1 0 0 0 0 1 5 2 0 0 1 0 0 16 0 1576.7441 Q7Z460;H0Y5T1;F8WA11 Q7Z460 1083 1098 CLASP1 CLIP-associating protein 1 yes no 2 3.4116E-29 162.76 By MS/MS By MS/MS 1 1 29452000 15688000 13764000 4155 2217 4649 10469;10470 9618;9619 9619 4422;4423 2 NSSPGEASLLEK VTEETDHRNSSPGEAS GEASLLEKETTRFFFF R N S E K E 1 0 1 0 0 0 2 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 12 0 1230.6092 Q76FK4 Q76FK4 1097 1108 NOL8 Nucleolar protein 8 yes yes 2 0.0012926 98.368 By MS/MS By matching 1 1 9788600 4330500 5458100 4156 2194 4650 10471;10472 9620 9620 4370 1 NSSQSGGKPGSSPITK SSGSSQSKNSSQSGGK PGSSPITKHGLSSGSS K N S T K H 0 0 1 0 0 1 0 3 0 1 0 2 0 0 2 5 1 0 0 0 0 0 16 1 1530.7638 Q15648 Q15648 1145 1160 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.019502 56.295 By matching By MS/MS 1 1 8933800 2375400 6558400 4157 1998 4651 10473;10474 9621 9621 3901 1 NSSSPVSPASVPGQR STTASARRNSSSPVSP PASVPGQRRLASRNGD R N S Q R R 1 1 1 0 0 1 0 1 0 0 0 0 0 0 3 5 0 0 0 2 0 0 15 0 1468.727 Q9H1B7 Q9H1B7 656 670 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 2 0.0057618 64.64 By MS/MS By MS/MS 1 1 11879000 6646300 5232300 4158 2636 4652 10475;10476 9622;9623 9623 5369;5370 2 NSSTPGLQVPVSPTVPIQNQK GNNQDLTRNSSTPGLQ TVPIQNQKYVPNSTDS R N S Q K Y 0 0 2 0 0 3 0 1 0 1 1 1 0 0 4 3 2 0 0 3 0 0 21 0 2190.1644 Q03164 Q03164 3025 3045 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 3.5782E-09 97.388 By MS/MS By MS/MS 1 1 77275000 42103000 35171000 4159 1846 4653 10477;10478 9624;9625;9626;9627 9625 3469 4 NSSTYWEGNPEMETLQR IKTIKIFKNSSTYWEG PEMETLQRIYGISFPD K N S Q R I 0 1 2 0 0 1 3 1 0 0 1 0 1 0 1 2 2 1 1 0 0 0 17 0 2040.8847 B7ZLP8;A2RTX5;H0YKB9 B7ZLP8 359 375 TARSL2 Probable threonine--tRNA ligase 2, cytoplasmic yes no 2 0.029377 41.54 By MS/MS 1 0 0 0 4160 400 4654 10479 9628 9628 7259 1 NSSYFVEWIPNNVK QMLNVQNKNSSYFVEW EWIPNNVKTAVCDIPP K N S V K T 0 0 3 0 0 0 1 0 0 1 0 1 0 1 1 2 0 1 1 2 0 0 14 0 1695.8257 Q5JP53;P07437;Q5ST81;A0A0B4J269;Q13509;K7ESM5;Q9BUF5;P68371;P04350;Q9BVA1;Q13885 Q5JP53 319 332 TUBB;TUBB3;TUBB6;TUBB4B;TUBB4A;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-2B chain;Tubulin beta-2A chain no no 2 0.0022521 87.184 By MS/MS By MS/MS 1 1 27641000 16246000 11396000 4161 1537;1935;1811 4655 10480;10481 9629;9630 9629 2 NSTGSGHSAQELPTIR EEAKRKRKNSTGSGHS AQELPTIRTPADIYRA K N S I R T 1 1 1 0 0 1 1 2 1 1 1 0 0 0 1 3 2 0 0 0 0 0 16 0 1653.8071 O94763;I3L280 O94763 371 386 URI1 Unconventional prefoldin RPB5 interactor 1 yes no 3 0.02918 49.049 By MS/MS By matching 1 1 6090200 4017200 2073000 4162 1459 4656 10482;10483 9631 9631 1 NSTLPMEETSPCSSR QSVVVVPKNSTLPMEE ETSPCSSRSSQSYRHY K N S S R S 0 1 1 0 1 0 2 0 0 0 1 0 1 0 2 4 2 0 0 0 0 0 15 0 1694.724 C9JG86;Q9BYW2;H7BZ93;H7BXT4;H7C3H4 C9JG86 1031 1045 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.0021608 87.789 By MS/MS By MS/MS 1 1 6480100 3480300 2999900 4163 591 4657 10484;10485 9632;9633 9633 1081;6378 2 NSVASPTSPTR YGDLKSRRNSVASPTS ASPTSPTRSLPRSASS R N S T R S 1 1 1 0 0 0 0 0 0 0 0 0 0 0 2 3 2 0 0 1 0 0 11 0 1115.5571 Q96HB5 Q96HB5 279 289 CCDC120 Coiled-coil domain-containing protein 120 yes yes 2 0.0053565 101.32 By MS/MS 1 0 0 0 4164 2499 4658 10486 9634 9634 7003 1 NSVLSDPGLDSPRTSPVIMAR LSESLMNRNSVLSDPG TSPVIMARVAQHHRRQ R N S A R V 1 2 1 2 0 0 0 1 0 1 2 0 1 0 3 4 1 0 0 2 0 0 21 1 2211.1318 O15085 O15085 241 261 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 3 0.002353 54.355 By MS/MS By MS/MS 3 3 34826000 18379000 16447000 4165 1357 4659;4660;4661 10487;10488;10489;10490;10491;10492 9635;9636;9637;9638;9639;9640 9635 164 2475;2476;6598 5 NSWDSPAFSNDVIR QTYHKEARNSWDSPAF AFSNDVIRKRHYRIGL R N S I R K 1 1 2 2 0 0 0 0 0 1 0 0 0 1 1 3 0 1 0 1 0 0 14 0 1606.7376 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 497 510 IQSEC1 IQ motif and SEC7 domain-containing protein 1 no no 2 0.0013929 85.473 By MS/MS By MS/MS 2 2 14936000 7951200 6984500 4166 78;299 4662 10493;10494;10495;10496 9641;9642;9643 9641 135;136 3 NSYATTAENK VRKSVTPKNSYATTAE YATTAENKTLPRSSSM K N S N K T 2 0 2 0 0 0 1 0 0 0 0 1 0 0 0 1 2 0 1 0 0 0 10 0 1097.4989 I3L3C6 I3L3C6 32 41 BAIAP2 yes yes 1 0.027085 41.029 By matching By MS/MS 1 1 3212600 1931800 1280900 4167 1212 4663 10497;10498 9644 9644 0 NSYATTENKTLPR VRKSVTPKNSYATTEN TENKTLPRSSSMAAGL K N S P R S 1 1 2 0 0 0 1 0 0 0 1 1 0 0 1 1 3 0 1 0 0 0 13 1 1493.7474 I3L0Y9;B4DWA1;I3L4C2;Q9UQB8 I3L0Y9 108 120 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 3 0.0054691 65.652 By MS/MS By MS/MS 1 1 5185700 2489700 2696000 4168 495 4664 10499;10500 9645;9646 9645 6353 2 NSYNNSQAPSPGLGSK KTLTEHLKNSYNNSQA PSPGLGSKAVGMPSPV K N S S K A 1 0 3 0 0 1 0 2 0 0 1 1 0 0 2 4 0 0 1 0 0 0 16 0 1619.754 Q9UHB7 Q9UHB7 1034 1049 AFF4 AF4/FMR2 family member 4 yes yes 2 1.5867E-28 156.11 By MS/MS By MS/MS 1 1 32908000 17001000 15907000 4169 2813 4665 10501;10502 9647;9648 9648 5774 2 NTDEMVELR EQAFKRSRNTDEMVEL TDEMVELRILLQSKNA R N T L R I 0 1 1 1 0 0 2 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 9 0 1105.5074 P61978;Q5T6W2;S4R457 P61978 38 46 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.00014766 155.42 By MS/MS By MS/MS 1 1 6957700 3787700 3170000 4170 1788 4666 10503;10504 9649;9650 9649 2 NTDYTELHQQNTDLIYQTGPK NASNIYSKNTDYTELH LIYQTGPKSTYISSAA K N T P K S 0 0 2 2 0 3 1 1 1 1 2 1 0 0 1 0 4 0 2 0 0 0 21 0 2478.1663 Q8TBA6 Q8TBA6 39 59 GOLGA5 Golgin subfamily A member 5 yes yes 3 0.0045748 50.237 By MS/MS 1 3712300 0 3712300 4171 2371 4667 10505 9651 9651 7810 1 NTEESSSPVRK VDTEPQKRNTEESSSP ESSSPVRKESSRGRHR R N T R K E 0 1 1 0 0 0 2 0 0 0 0 1 0 0 1 3 1 0 0 1 0 0 11 1 1232.5997 Q5T200 Q5T200 104 114 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 6.8355E-30 187.62 By matching By MS/MS 1 1 57856000 28774000 29082000 4172 2094 4668 10506;10507 9652 9652 4133 1 NTETSKSPEKDVPMVEK KLPIQKHRNTETSKSP KDVPMVEKKSKKPKKK R N T E K K 0 0 1 1 0 0 3 0 0 0 0 3 1 0 2 2 2 0 0 2 0 0 17 2 1917.9354 O14617 O14617 823 839 AP3D1 AP-3 complex subunit delta-1 yes yes 3 0.0086697 56.48 By MS/MS By MS/MS 1 1 29931000 15189000 14741000 4173 1341 4669 10508;10509 9653;9654 9653 2431 2 NTFTAWSDEESDYEIDDR MEQMDGRKNTFTAWSD SDYEIDDRDVNKILIV K N T D R D 1 1 1 4 0 0 3 0 0 1 0 0 0 1 0 2 2 1 1 0 0 0 18 0 2191.8818 Q6PKG0;A0A0B4J210;E5RH50 Q6PKG0 621 638 LARP1 La-related protein 1 yes no 2 1.1116E-05 87.16 By MS/MS By MS/MS 1 1 9418700 4548700 4870000 4174 2162 4670 10510;10511 9655;9656 9656 4306;4307;6909 2 NTFTAWSDEESDYEIDDRDVNK MEQMDGRKNTFTAWSD IDDRDVNKILIVTQTP K N T N K I 1 1 2 5 0 0 3 0 0 1 0 1 0 1 0 2 2 1 1 1 0 0 22 1 2648.115 Q6PKG0;A0A0B4J210;E5RH50 Q6PKG0 621 642 LARP1 La-related protein 1 yes no 3 1.7427E-50 159.4 By MS/MS By MS/MS 1 1 45999000 19184000 26815000 4175 2162 4671 10512;10513 9657;9658 9658 4306;4307;6909 2 NTGIICTIGPASR DSPPITARNTGIICTI CTIGPASRSVELKKGA R N T S R S 1 1 1 0 1 0 0 2 0 3 0 0 0 0 1 1 2 0 0 0 0 0 13 0 1358.6976 B4DNK4;H3BTN5;P14618;H3BQ34;H3BU13;H3BT25;H3BUW1;H3BTJ2 B4DNK4 44 56 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 0.0038346 86.911 By MS/MS By MS/MS 1 1 8120900 4813600 3307300 4176 485 4672 10514;10515 9659;9660;9661 9659 3 NTGVSPASRPSPGTPTSPSNLTSGLK SSLTSVMKNTGVSPAS SNLTSGLKTPAPATTT K N T L K T 1 1 2 0 0 0 0 3 0 0 2 1 0 0 5 6 4 0 0 1 0 0 26 1 2509.2772 Q5VT52 Q5VT52 469 494 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 3.1648E-05 67.88 By MS/MS By MS/MS 2 2 52644000 28631000 24012000 4177 2115 4673;4674 10516;10517;10518;10519 9662;9663;9664 9663 4191;4192;4193;6890;6891 3 NTLKDSLFK SRCLSSSKNTLKDSLF TLKDSLFKNGNSCASQ K N T F K N 0 0 1 1 0 0 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 9 1 1064.5866 Q9P0U3 Q9P0U3 228 236 SENP1 Sentrin-specific protease 1 yes yes 3 0.014609 58.676 By MS/MS 1 0 0 0 4178 2775 4675 10520 9665 9665 5692 1 NTPASASLEGLAQTAGR KKKKPRTKNTPASASL GLAQTAGRRPSEGNEP K N T G R R 4 1 1 0 0 1 1 2 0 0 2 0 0 0 1 2 2 0 0 0 0 0 17 0 1642.8275 F2Z329;A0A087WWU1;Q96Q45 F2Z329 43 59 TMEM237 Transmembrane protein 237 yes no 2 0.00053498 76.761 By matching By MS/MS 1 1 16047000 7999600 8047500 4179 83 4676 10521;10522 9666 9666 157 1 NTPSQHSHSIQHSPER LSTVHSAKNTPSQHSH SIQHSPERSGSGSVGN K N T E R S 0 1 1 0 0 2 1 0 3 1 0 0 0 0 2 4 1 0 0 0 0 0 16 0 1840.8565 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 256 271 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3;4 1.0539E-10 128.79 By MS/MS By MS/MS 4 3 1311200000 626400000 684850000 4180 2759 4677;4678 10523;10524;10525;10526;10527;10528;10529 9667;9668;9669;9670;9671;9672;9673 9670 5648;5649;5650;7074 7 NTPVKSSEGSQQR AIDVERLKNTPVKSSE SSEGSQQRSPSYTNDS K N T Q R S 0 1 1 0 0 2 1 1 0 0 0 1 0 0 1 3 1 0 0 1 0 0 13 1 1416.6957 Q04656 Q04656 257 269 ATP7A Copper-transporting ATPase 1 yes yes 2 0.023593 41.092 By MS/MS 1 856050 0 856050 4181 1849 4679 10530 9674 9674 1 NTPYKTLEPVKPPTVPNDYMTSPAR SGRGTLGRNTPYKTLE DYMTSPARLGSQHSPG R N T A R L 1 1 2 1 0 0 1 0 0 0 1 2 1 0 6 1 4 0 2 2 0 0 25 2 2815.4215 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 195 219 ABI1 Abl interactor 1 yes no 3 0.00021181 63.674 By MS/MS By MS/MS 2 2 89062000 49896000 39166000 4182 201 4680;4681 10531;10532;10533;10534 9675;9676;9677;9678 9677 22 367;6275;6276;7202;7203 4 NTQKEANKNFEK AKFSAYIKNTQKEANK EANKNFEKSLLKEFKR K N T E K S 1 0 3 0 0 1 2 0 0 0 0 3 0 1 0 0 1 0 0 0 0 0 12 2 1449.7212 A6PVS0;O15247 A6PVS0 84 95 CLIC2 Chloride intracellular channel protein 2 yes no 2 0.011852 59.426 By MS/MS By matching 1 1 11212000 7198700 4012900 4183 425 4682 10535;10536 9679 9679 1 NTSLPPLWSPEAER DKDITVSKNTSLPPLW LWSPEAERSHSLSQHT K N T E R S 1 1 1 0 0 0 2 0 0 0 2 0 0 0 3 2 1 1 0 0 0 0 14 0 1595.7944 P49790 P49790 201 214 NUP153 Nuclear pore complex protein Nup153 yes yes 2 7.1533E-05 114.21 By MS/MS By MS/MS 1 1 23977000 12565000 11411000 4184 1729 4683 10537;10538 9680;9681;9682;9683 9680 3253 4 NTSNIPVILEPETEESENEFYIK VHLRKSTRNTSNIPVI SENEFYIKQKKARPSV R N T I K Q 0 0 3 0 0 0 6 0 0 3 1 1 0 1 2 2 2 0 1 1 0 0 23 0 2694.2912 Q6P0N0 Q6P0N0 809 831 MIS18BP1 Mis18-binding protein 1 yes yes 3 0.00053477 62.684 By matching By MS/MS 1 1 13941000 8306300 5634300 4185 2150 4684 10539;10540 9684 9684 4282 1 NTYSGLQLIIVILPGK EPMFRHLKNTYSGLQL IIVILPGKTPVYAEVK K N T G K T 0 0 1 0 0 1 0 2 0 3 3 1 0 0 1 1 1 0 1 1 0 0 16 0 1728.0186 Q5TA58;Q9UL18;Q9H9G7 Q5TA58 433 448 AGO1;AGO3 Protein argonaute;Protein argonaute-1;Protein argonaute-3 yes no 2 0.010098 48.948 By matching By MS/MS 1 1 33204000 18731000 14474000 4186 2105 4685 10541;10542 9685 9685 6883;7745 1 NVALLSQLYHSPAR AANPNQNKNVALLSQL QLYHSPARRFGGPVHH K N V A R R 2 1 1 0 0 1 0 0 1 0 3 0 0 0 1 2 0 0 1 1 0 0 14 0 1567.8471 Q15717 Q15717 192 205 ELAVL1 ELAV-like protein 1 yes yes 2;3 5.7978E-17 154.52 By MS/MS By MS/MS 2 2 30791000 19241000 11550000 4187 2004 4686 10543;10544;10545;10546 9686;9687;9688;9689 9687 3909 4 NVDNAEGSDTDY MDNYMLSRNVDNAEGS AEGSDTDY________ R N V D Y - 1 0 2 3 0 0 1 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 12 0 1298.4899 Q15751 Q15751 4850 4861 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 2 0.0081563 69.815 By MS/MS By matching 1 1 7846000 4842800 3003200 4188 2008 4687 10547;10548 9690 9690 3916 1 NVFSSSGTSFSGR FTVGSNGKNVFSSSGT SGTSFSGRKIKTAVRR K N V G R K 0 1 1 0 0 0 0 2 0 0 0 0 0 2 0 5 1 0 0 1 0 0 13 0 1331.6106 P49790 P49790 1453 1465 NUP153 Nuclear pore complex protein Nup153 yes yes 2 8.5854E-07 125.97 By MS/MS By matching 1 1 5639900 2975500 2664400 4189 1729 4688 10549;10550 9691 9691 6719 1 NVLIVEDIIDTGK DLSTLTGKNVLIVEDI EDIIDTGKTMQTLLSL K N V G K T 0 0 1 2 0 0 1 1 0 3 1 1 0 0 0 0 1 0 0 2 0 0 13 0 1427.7872 P00492 P00492 129 141 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.006567 77.64 By matching By MS/MS 1 1 3427400 1679900 1747600 4190 1510 4689 10551;10552 9692 9692 1 NVLSQYWTMGSR KKLLPQEKNVLSQYWT QYWTMGSRNTKKSVNN K N V S R N 0 1 1 0 0 1 0 1 0 0 1 0 1 0 0 2 1 1 1 1 0 0 12 0 1440.682 J3KN34;P26045 J3KN34 319 330 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 yes no 2 0.0012566 90.149 By MS/MS By matching 1 1 3094500 1816900 1277600 4191 1221 4690 10553;10554 9693 9693 7475 1 NVNIYRDSAIPVESDTDDEGAPR EEDEAIRKNVNIYRDS TDDEGAPRISLAEMLE K N V P R I 2 2 2 4 0 0 2 1 0 2 0 0 0 0 2 2 1 0 1 2 0 0 23 1 2532.1728 C9JA08;Q96D46 C9JA08 455 477 NMD3 60S ribosomal export protein NMD3 yes no 3 0.014095 45.042 By matching By MS/MS 1 1 14619000 6748800 7869900 4192 575 4691 10555;10556 9694 9694 1053 1 NVPQEESLEDSDVDADFK DEHLLKKRNVPQEESL SDVDADFKAQNVTLEA R N V F K A 1 0 1 4 0 1 3 0 0 0 1 1 0 1 1 2 0 0 0 2 0 0 18 0 2035.8858 O00505 O00505 50 67 KPNA3 Importin subunit alpha-4 yes yes 2;3 0.0034407 66.023 By MS/MS By MS/MS 2 3 98555000 45681000 52873000 4193 1334 4692;4693 10557;10558;10559;10560;10561 9695;9696;9697;9698;9699 9695 2403;2404 5 NVSAGTQDVPSPPSDYVER PNVEEWVKNVSAGTQD PPSDYVERVDSPMAYS K N V E R V 1 1 1 2 0 1 1 1 0 0 0 0 0 0 3 3 1 0 1 3 0 0 19 0 2016.9389 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 300 318 OCLN Occludin yes no 2 9.8856E-05 80.312 By MS/MS By matching 1 1 6072900 3455200 2617700 4194 324 4694 10562;10563 9700 9700 610 1 NVSPEFVPCEGEGGFGLHK KHLNSLPRNVSPEFVP EGGFGLHKKKDLLSDN R N V H K K 0 0 1 0 1 0 3 4 1 0 1 1 0 2 2 1 0 0 0 2 0 0 19 0 2058.9469 O94986 O94986 1459 1477 CEP152 Centrosomal protein of 152 kDa yes yes 3 0.0040847 57.188 By MS/MS 1 2843200 0 2843200 4195 1470 4695 10564 9701;9702 9702 2725 2 NVSSFPDDATSPLQENR DDQMLKRRNVSSFPDD TSPLQENRNNQGTVNW R N V N R N 1 1 2 2 0 1 1 0 0 0 1 0 0 1 2 3 1 0 0 1 0 0 17 0 1875.8599 P52292;J3QLL0;J3KS65 P52292 52 68 KPNA2 Importin subunit alpha-1 yes no 2;3 5.3944E-85 199.91 By MS/MS By MS/MS 3 2 90488000 50689000 39799000 4196 1752 4696 10565;10566;10567;10568;10569 9703;9704;9705;9706;9707;9708;9709;9710;9711 9704 3309 9 NWEDEDFYDSDDDTFLDRTGLIEKK VSRKRKAKNWEDEDFY RTGLIEKKRLNRMKKA K N W K K R 0 1 1 7 0 0 3 1 0 1 2 2 0 2 0 1 2 1 1 0 0 0 25 2 3065.3414 A0A087WWF4;A0A087X0M4;Q9BWU0 A0A087WWF4 227 251 SLC4A1AP Kanadaptin yes no 3 0.00031168 64.377 By MS/MS By matching 1 1 21146000 16355000 4790700 4197 76 4697 10570;10571 9712 9712 130;7162 1 NWGAVVRSPEGTPQK AFAVGVEKNWGAVVRS SPEGTPQKIRQLIDEG K N W Q K I 1 1 1 0 0 1 1 2 0 0 0 1 0 0 2 1 1 1 0 2 0 0 15 1 1624.8322 C9J0I9;Q86WB0;F8WAU5;F8WBD7;F8WDK5;F8WF13 C9J0I9 17 31 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 4.9191E-20 139.21 By MS/MS By MS/MS 2 2 35303000 17819000 17484000 4198 551 4698 10572;10573;10574;10575 9713;9714;9715 9713 1004 3 NYEGSPIKVTLATLK ________________ KVTLATLKMSVQPTVS M N Y L K M 1 0 1 0 0 0 1 1 0 1 2 2 0 0 1 1 2 0 1 1 0 0 15 1 1632.9087 E5RI98 E5RI98 2 16 NPM1 yes yes 3 0.0062985 66.809 By MS/MS 1 0 0 0 4199 699 4699 10576 9716 9716 1238 1 NYEPLKTQPK TSNRHIDRNYEPLKTQ EPLKTQPKKYAKSKYD R N Y P K K 0 0 1 0 0 1 1 0 0 0 1 2 0 0 2 0 1 0 1 0 0 0 10 1 1216.6452 Q12929 Q12929 524 533 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 2 0.010734 66.299 By MS/MS 1 0 0 0 4200 1886 4700 10577 9717 9717 7680 1 NYGNSSVQASEMTVPQK SVFNHAKKNYGNSSVQ SEMTVPQKPSVCHRPC K N Y Q K P 1 0 2 0 0 2 1 1 0 0 0 1 1 0 1 3 1 0 1 2 0 0 17 0 1838.8469 E2QRN0;Q7Z353 E2QRN0 138 154 HDX Highly divergent homeobox yes no 2 0.016678 54.004 By MS/MS 1 0 0 0 4201 689 4701 10578 9718 9718 77 1215;7349 1 NYGSYSTQASAAAATAELLK KLSPTEPKNYGSYSTQ AATAELLKKQEELNRK K N Y L K K 6 0 1 0 0 1 1 1 0 0 2 1 0 0 0 3 2 0 2 0 0 0 20 0 2015.98 O14828 O14828 82 101 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2;3 5.7252E-81 185.27 By MS/MS By MS/MS 4 4 90152000 49150000 41002000 4202 1346 4702;4703 10579;10580;10581;10582;10583;10584;10585;10586 9719;9720;9721;9722;9723;9724;9725;9726;9727 9724 2454;7508;7509 9 NYGYNPSPVKPEGLR SVVTESSRNYGYNPSP PVKPEGLRRPPSKTSM R N Y L R R 0 1 2 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 2 1 0 0 15 1 1689.8475 E9PRF4;Q15047 E9PRF4 1060 1074 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes no 2;3 0.00028177 97.214 By MS/MS By MS/MS 2 2 51021000 31768000 19253000 4203 842 4704 10587;10588;10589;10590 9728;9729;9730;9731 9729 1519;7394 4 NYILDQTNVYGSAQR QIAARKKRNYILDQTN NVYGSAQRRKMRPFEG R N Y Q R R 1 1 2 1 0 2 0 1 0 1 1 0 0 0 0 1 1 0 2 1 0 0 15 0 1740.8431 A0A0A0MRA5;M0R3F1;B7Z4B8;Q9BUJ2 A0A0A0MRA5 401 415 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 2 3.1563E-06 117.4 By MS/MS By MS/MS 1 1 9121000 5226300 3894700 4204 174 4705 10591;10592 9732;9733 9733 309 2 NYILMLTNSLEEMK IATLLLARNYILMLTN TNSLEEMKRLVSEIYG R N Y M K R 0 0 2 0 0 0 2 0 0 1 3 1 2 0 0 1 1 0 1 0 0 0 14 0 1697.8368 Q13516 Q13516 157 170 OLIG2 Oligodendrocyte transcription factor 2 yes yes 2 0.016556 47.228 By MS/MS 1 13997000 13997000 0 4205 1920 4706 10593 9734 9734 254 7688 1 NYQNGDVFGDEYR EEEAQKGKNYQNGDVF DVFGDEYRIKPVEEVK K N Y Y R I 0 1 2 2 0 1 1 2 0 0 0 0 0 1 0 0 0 0 2 1 0 0 13 0 1575.659 Q9H246 Q9H246 23 35 C1orf21 Uncharacterized protein C1orf21 yes yes 2 7.06E-11 129.89 By MS/MS By matching 1 1 2930100 1802800 1127300 4206 2641 4707 10594;10595 9735 9735 7888 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR PRRRGPPRNYQQNYQN PEGQAQQRRPYRRRRF R N Y Q R R 2 1 4 0 0 6 5 3 0 0 0 1 0 0 1 4 0 0 2 0 0 0 29 1 3256.3889 H0Y449;P67809;C9J5V9 H0Y449 207 235 YBX1 Nuclease-sensitive element-binding protein 1 yes no 3 2.7967E-10 85.11 By matching By MS/MS 1 1 51018000 28938000 22079000 4207 1015 4708 10596;10597 9736 9736 1875 1 NYQSQADIPIRSPFGIVK VGSRGSKKNYQSQADI RSPFGIVKASWLPKFS K N Y V K A 1 1 1 1 0 2 0 1 0 3 0 1 0 1 2 2 0 0 1 1 0 0 18 1 2032.0742 Q14966;A0A096LPH6 Q14966 372 389 ZNF638 Zinc finger protein 638 yes no 2;3 0.00053906 73.279 By MS/MS By MS/MS 2 2 58379000 34550000 23828000 4208 1961 4709 10598;10599;10600;10601 9737;9738;9739 9738 3813 3 NYSQMRIR GALYSEERNYSQMRIR NYSQMRIRAKQWAEGM R N Y I R A 0 2 1 0 0 1 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 0 8 1 1066.5342 Q6ZV29 Q6ZV29 975 982 PNPLA7 Patatin-like phospholipase domain-containing protein 7 yes yes 2 0.025052 46.016 By MS/MS 1 0 0 0 4209 2186 4710 10602 9740 9740 7764 1 NYSREQHGVAASCLEDLR LKPCLLRRNYSREQHG ASCLEDLRSKACDILA R N Y L R S 2 2 1 1 1 1 2 1 1 0 2 0 0 0 0 2 0 0 1 1 0 0 18 1 2103.9756 O00273;K7ERT1 O00273 26 43 DFFA DNA fragmentation factor subunit alpha yes no 3 0.012434 48.907 By matching By MS/MS 1 1 16387000 8287400 8100000 4210 1329 4711 10603;10604 9741 9741 2397 1 NYSSPPPCHLSR DSNRIGRRNYSSPPPC PPPCHLSRQVPYDEIS R N Y S R Q 0 1 1 0 1 0 0 0 1 0 1 0 0 0 3 3 0 0 1 0 0 0 12 0 1413.6459 Q12986 Q12986 47 58 NFX1 Transcriptional repressor NF-X1 yes yes 2;3 0.0011603 90.926 By MS/MS By MS/MS 1 2 21942000 8227300 13715000 4211 1889 4712 10605;10606;10607 9742;9743;9744;9745;9746;9747;9748 9748 3604;3605 7 NYYEQWGK ETTEESLRNYYEQWGK NYYEQWGKLTDCVVMR R N Y G K L 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 1 2 0 0 0 8 0 1086.4771 P22626;A0A087WUI2 P22626 39 46 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.01341 95.531 By matching By MS/MS 1 1 4690300 2887500 1802800 4212 1618 4713 10608;10609 9749 9749 1 PAMPQDSVPSPR VAPAKKAKPAMPQDSV QDSVPSPRSLQGKSTT K P A P R S 1 1 0 1 0 1 0 0 0 0 0 0 1 0 4 2 0 0 0 1 0 0 12 0 1280.6183 P53396 P53396 472 483 ACLY ATP-citrate synthase yes yes 2 0.0071471 71.513 By matching By MS/MS 1 1 8018400 4410300 3608100 4213 1761 4714 10610;10611 9750 9750 3324 1 PAPPPQSQSPEVEQLGR LQMALNGKPAPPPQSQ PEVEQLGRVVELDSDM K P A G R V 1 1 0 0 0 3 2 1 0 0 1 0 0 0 5 2 0 0 0 1 0 0 17 0 1815.9115 P52948 P52948 926 942 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 3 0.000573 81.878 By MS/MS 1 0 0 0 4214 1759 4715 10612 9751 9751 3322 1 PASPDRFAVSAEAENK ________________ VSAEAENKVREQQPHV R P A N K V 4 1 1 1 0 0 2 0 0 0 0 1 0 1 2 2 0 0 0 1 0 0 16 1 1687.8166 G3V331;O15037 G3V331 8 23 KHNYN Protein KHNYN yes no 3 0.0088992 54.393 By matching By MS/MS 1 1 3476200 1709300 1766900 4215 965 4716 10613;10614 9752 9752 1758 1 PATPGASSVEQLRK GPGTPEPRPATPGASS SSVEQLRKEGNELFKC R P A R K E 2 1 0 0 0 1 1 1 0 0 1 1 0 0 2 2 1 0 0 1 0 0 14 1 1439.7732 Q9H3U1 Q9H3U1 13 26 UNC45A Protein unc-45 homolog A yes yes 2;3 0.0012506 93.348 By MS/MS By MS/MS 2 2 27702000 13555000 14147000 4216 2655 4717 10615;10616;10617;10618 9753;9754;9755 9754 7051 3 PCSEETPAISPSK ________________ TPAISPSKRARPAEVG M P C S K R 1 0 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 13 0 1401.6446 H0YNJ9 H0YNJ9 2 14 DUT yes yes 2 3.4966E-216 269.87 By MS/MS By MS/MS 1 1 109210000 58086000 51123000 4217 1103 4718 10619;10620 9756;9757;9758;9759 9759 2028;6534 4 PCSEETPAISPSKR ________________ PAISPSKRARPAEVGG M P C K R A 1 1 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 14 1 1557.7457 H0YNJ9 H0YNJ9 2 15 DUT yes yes 2;3 2.1082E-229 262.83 By MS/MS By MS/MS 3 3 2412500000 1156800000 1255700000 4218 1103 4719 10621;10622;10623;10624;10625;10626 9760;9761;9762;9763;9764;9765;9766;9767;9768;9769 9761 2028;6534 10 PEELSAAPPPK P E P K 2 0 0 0 0 0 2 0 0 0 1 1 0 0 4 1 0 0 0 0 0 0 11 0 1134.5921 REV__A0A087WYH0 yes no 2 0.00158 96.171 By MS/MS By MS/MS 2 2 49821000 21217000 28605000 + 4219 2958 4720 10627;10628;10629;10630 9770;9771 9771 6143 2 PEENLILDAQATSR ARAEAGARPEENLILD LDAQATSRSTGPEGVT R P E S R S 2 1 1 1 0 1 2 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 14 0 1555.7842 P98095 P98095 336 349 FBLN2 Fibulin-2 yes yes 2 0.0056034 66.784 By MS/MS By matching 2 1 1245400000 820090000 425290000 4220 1819 4721 10631;10632;10633 9772 9772 3406 1 PEFLEDPSVLTK ________________ EDPSVLTKDKLKSELV M P E T K D 0 0 0 1 0 0 2 0 0 0 2 1 0 1 2 1 1 0 0 1 0 0 12 0 1373.7078 P42166;G5E972;P42167 G5E972 2 13 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 0.0027398 98.04 By MS/MS By MS/MS 1 1 1071200 1071200 0 4221 990;1695 4722 10634;10635 9773;9774 9773 2 PEQLPIYTAPPLQSK ESKKQLVKPEQLPIYT TAPPLQSKYVEEQPGH K P E S K Y 1 0 0 0 0 2 1 0 0 1 2 1 0 0 4 1 1 0 1 0 0 0 15 0 1680.9087 A0A087WUX8;A0A087WYF7;Q6UXV4 A0A087WUX8 33 47 APOOL MICOS complex subunit MIC27 yes no 2 0.022813 48.004 By MS/MS 1 0 0 0 4222 52 4723 10636 9775 9775 7158 1 PETPEETQRESTEK LQPPKMTKPETPEETQ TQRESTEKKRTEPPEQ K P E E K K 0 1 0 0 0 1 5 0 0 0 0 1 0 0 2 1 3 0 0 0 0 0 14 1 1659.7588 Q9P1V8 Q9P1V8 238 251 SAMD15 Sterile alpha motif domain-containing protein 15 yes yes 2 0.011866 57.492 By MS/MS 1 0 0 0 4223 2777 4724 10637 9776 9776 5695 1 PFFGNTFSPK ________________ FGNTFSPKKTPPRKSA M P F P K K 0 0 1 0 0 0 0 1 0 0 0 1 0 3 2 1 1 0 0 0 0 0 10 0 1140.5604 B0QY53;B0QY54;Q9Y3M2 B0QY53 2 11 CBY1 Protein chibby homolog 1 yes no 2 3.314E-05 121.21 By MS/MS By MS/MS 1 1 14960000 8494700 6465000 4224 444 4725 10638;10639 9777;9778;9779 9777 871 3 PFGSVSSPK MAYNKAPRPFGSVSSP FGSVSSPKVTSIPSPS R P F P K V 0 0 0 0 0 0 0 1 0 0 0 1 0 1 2 3 0 0 0 1 0 0 9 0 904.46543 Q96HC4;A0A0D9SFR4 Q96HC4 131 139 PDLIM5 PDZ and LIM domain protein 5 yes no 2 0.0017091 137.46 By MS/MS By MS/MS 1 1 7759800 3969100 3790700 4225 2500 4726 10640;10641 9780;9781;9782 9781 5034;5035;5036 3 PFSAPKPQTSPSPK GPVRSGPKPFSAPKPQ PQTSPSPKRATKKEPA K P F P K R 1 0 0 0 0 1 0 0 0 0 0 2 0 1 5 3 1 0 0 0 0 0 14 1 1467.7722 Q01518 Q01518 299 312 CAP1 Adenylyl cyclase-associated protein 1 yes yes 2 0.0035885 88.163 By MS/MS By MS/MS 1 1 4379900 2737900 1642000 4226 1830 4727 10642;10643 9783;9784 9784 3426;3427;6762 2 PFSNSHNALK ________________ SNSHNALKLRFPAEDE M P F L K L 1 0 2 0 0 0 0 0 1 0 1 1 0 1 1 2 0 0 0 0 0 0 10 0 1113.5567 P12277;G3V4N7;G3V2I1 P12277 2 11 CKB Creatine kinase B-type yes no 2 1.8051E-05 128.36 By MS/MS By MS/MS 1 1 22638000 11463000 11175000 4227 1571 4728 10644;10645 9785;9786 9785 2887 2 PGALPANLDDMKVAELKQELK NSTSLTGKPGALPANL AELKQELKLRSLPVSG K P G L K L 3 0 1 2 0 1 2 1 0 0 4 3 1 0 2 0 0 0 0 1 0 0 21 2 2279.2195 W0Z7M9;E7ER32;A0A087X287;Q969V6;B0QY83;A0A087WU73 W0Z7M9 375 395 mkl1;MKL1 MKL/myocardin-like protein 1 yes no 2 0.019502 45.79 By MS/MS 1 1668700 0 1668700 4228 3015 4729 10646 9787 9787 0 PGEGGTGSPGPALRTRTK EISVLLTRPGEGGTGS PALRTRTKCADPMRGP R P G T K C 1 2 0 0 0 0 1 5 0 0 1 1 0 0 3 1 3 0 0 0 0 0 18 2 1737.9122 E7EPS8;P28827;J3QLI4 E7EPS8 296 313 PTPRM Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase mu yes no 2 0.013772 62.528 By MS/MS 1 7156000 0 7156000 4229 718 4730 10647 9788 9788 1278 1 PGGLLLGDVAPNFEANTTVGR ________________ EANTTVGRIRFHDFLG M P G G R I 2 1 2 1 0 0 1 4 0 0 3 0 0 1 2 0 2 0 0 2 0 0 21 0 2097.0855 P30041 P30041 2 22 PRDX6 Peroxiredoxin-6 yes yes 2;3 1.3332E-25 130.36 By MS/MS By MS/MS 2 2 6144700 4356600 1788100 4230 1650 4731 10648;10649;10650;10651 9789;9790;9791 9789 3 PGMYPDPHSPFAVSPIPGR IMLPLFARPGMYPDPH AVSPIPGRGGVLNVPI R P G G R G 1 1 0 1 0 0 0 2 1 1 0 0 1 1 6 2 0 0 1 1 0 0 19 0 2020.9829 P41162 P41162 237 255 ETV3 ETS translocation variant 3 yes yes 3 0.0070862 50.189 By MS/MS By matching 1 1 5371400 3466700 1904700 4231 1690 4732 10652;10653 9792 9792 3101;3102 1 PGPPGSPR AVSPGSWKPGPPGSPR PGPPGSPRPWKSNPSA K P G P R P 0 1 0 0 0 0 0 2 0 0 0 0 0 0 4 1 0 0 0 0 0 0 8 0 763.39769 Q96JM3 Q96JM3 314 321 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.022532 82.305 By MS/MS 1 0 0 0 4232 2509 4733 10654 9793 9793 1 PGPTPSGTNVGSSGR ________________ TNVGSSGRSPSKAVAA M P G G R S 0 1 1 0 0 0 0 4 0 0 0 0 0 0 3 3 2 0 0 1 0 0 15 0 1369.6586 P60468 P60468 2 16 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.0028927 84.62 By MS/MS By MS/MS 1 1 8368300 4026700 4341600 4233 1783 4734 10655;10656 9794;9795 9794 3358;3359;6742 2 PGPTPSGTNVGSSGRSPSK ________________ SSGRSPSKAVAARAAG M P G S K A 0 1 1 0 0 0 0 4 0 0 0 1 0 0 4 5 2 0 0 1 0 0 19 1 1768.8704 P60468 P60468 2 20 SEC61B Protein transport protein Sec61 subunit beta yes yes 3 1.1185E-46 166.67 By MS/MS By MS/MS 1 1 486630000 232110000 254520000 4234 1783 4735 10657;10658 9796;9797 9796 3358;3359;3360;3361;6742 2 PGPTPSGTNVGSSGRSPSKAVAAR ________________ PSKAVAARAAGSTVRQ M P G A R A 3 2 1 0 0 0 0 4 0 0 0 1 0 0 4 5 2 0 0 2 0 0 24 2 2237.1513 P60468 P60468 2 25 SEC61B Protein transport protein Sec61 subunit beta yes yes 3;4 0.00028871 60.332 By MS/MS By MS/MS 2 2 255900000 144910000 110990000 4235 1783 4736 10659;10660;10661;10662 9798;9799;9800 9798 3358;3359;3360;3361;6742 3 PGQAERLQGRHSQSGR HSPVGPRRPGQAERLQ GRHSQSGRGPRENPLP R P G G R G 1 3 0 0 0 3 1 3 1 0 1 0 0 0 1 2 0 0 0 0 0 0 16 2 1762.8935 M0R2T5;M0R118 M0R2T5 30 45 STXBP2 yes no 2 0.019257 50.827 By MS/MS 1 5547700 5547700 0 4236 1318 4737 10663 9801 9801 2373 0 PGSPPPRGQAPPESR P G S R 1 2 0 0 0 1 1 2 0 0 0 0 0 0 6 2 0 0 0 0 0 0 15 1 1528.7746 REV__Q99933 yes no 3 0.0080433 59.248 By MS/MS 1 9434200 9434200 0 + 4237 2980 4738 10664 9802 9802 6167;6168 1 PGVPVEGSPGRNPGV AAGSSHSRPGVPVEGS SPGRNPGV________ R P G G V - 0 1 1 0 0 0 1 4 0 0 0 0 0 0 4 1 0 0 0 3 0 0 15 1 1417.7314 Q8NE01 Q8NE01 693 707 CNNM3 Metal transporter CNNM3 yes yes 2 0.017343 58.079 By MS/MS 1 1729900 1729900 0 4238 2348 4739 10665 9803 9803 4709 1 PGVTEATITGLEPGTEYTIYVIALK REVVPRPRPGVTEATI TIYVIALKNNQKSEPL R P G L K N 2 0 0 0 0 0 3 3 0 3 2 1 0 0 2 0 5 0 2 2 0 0 25 0 2635.3997 P02751;H0Y7Z1;H0Y4K8 P02751 1953 1977 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 1.1176E-15 103.58 By matching By MS/MS 1 1 11784000 6700100 5084000 4239 1518 4740 10666;10667 9804 9804 1 PGWLSSPTLGR GGPLPLPRPGWLSSPT LSSPTLGRANRFLSTA R P G G R A 0 1 0 0 0 0 0 2 0 0 2 0 0 0 2 2 1 1 0 0 0 0 11 0 1169.6193 C9JS59;C9J266;Q5XPI4 C9JS59 670 680 RNF123 E3 ubiquitin-protein ligase RNF123 yes no 2 1.6588E-06 148.13 By MS/MS By MS/MS 1 1 10632000 5043900 5588300 4240 556 4741 10668;10669 9805;9806 9805 1026;1027 2 PIDQNFQPMSSSCRELR KTFTQRPKPIDQNFQP SSSCRELRRHPMDQSY K P I L R R 0 2 1 1 1 2 1 0 0 1 1 0 1 1 2 3 0 0 0 0 0 0 17 1 2063.9517 Q9ULL8 Q9ULL8 806 822 SHROOM4 Protein Shroom4 yes yes 4 0.02886 40.983 By matching By MS/MS 1 1 3716300 622040 3094200 4241 2852 4742 10670;10671 9807 9807 0 PIFGGTVYHSPVSR ATANSSIRPIFGGTVY VYHSPVSRLPPSGSKP R P I S R L 0 1 0 0 0 0 0 2 1 1 0 0 0 1 2 2 1 0 1 2 0 0 14 0 1515.7834 G3V3N7;O43663;H0YNE4 G3V3N7 121 134 PRC1 Protein regulator of cytokinesis 1 yes no 2;3 0.00081151 98.676 By MS/MS By MS/MS 2 2 10082000 5627000 4454700 4242 970 4743 10672;10673;10674;10675 9808;9809;9810;9811 9811 1767;1768 4 PKSPSSGSGGGGPK PKHALKPRPKSPSSGS GSGGGGPKPYKCPECD R P K P K P 0 0 0 0 0 0 0 5 0 0 0 2 0 0 3 4 0 0 0 0 0 0 14 1 1198.5942 Q9ULD5 Q9ULD5 621 634 ZNF777 Zinc finger protein 777 yes yes 3 0.023331 50.46 By MS/MS By matching 1 1 940590 502580 438010 4243 2842 4744 10676;10677 9812 9812 0 PLKPLSPLR RNYSVGSRPLKPLSPL LKPLSPLRAQDMQEGA R P L L R A 0 1 0 0 0 0 0 0 0 0 3 1 0 0 3 1 0 0 0 0 0 0 9 1 1019.6492 O60825 O60825 488 496 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 2 0.008832 80.979 By MS/MS By matching 1 1 4898700 2953500 1945100 4244 1422 4745 10678;10679 9813 9813 2616 1 PLPEGWEMRFTVDGIPYFVDHNR SQGQLNEKPLPEGWEM PYFVDHNRRTTTYIDP K P L N R R 0 2 1 2 0 0 2 2 1 1 1 0 1 2 3 0 1 1 1 2 0 0 23 1 2774.3275 Q96J02 Q96J02 479 501 ITCH E3 ubiquitin-protein ligase Itchy homolog yes yes 3 0.020772 43.534 By MS/MS By matching 1 1 9460800 4070900 5389900 4245 2504 4746 10680;10681 9814 9814 1 PLSPGALQLAGEK KLSPQDPRPLSPGALQ ALQLAGEKSSEKGLRE R P L E K S 2 0 0 0 0 1 1 2 0 0 3 1 0 0 2 1 0 0 0 0 0 0 13 0 1279.7136 Q8TEK3 Q8TEK3 832 844 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 0.0030983 81.128 By MS/MS By MS/MS 1 1 6122100 3068800 3053300 4246 2388 4747 10682;10683 9815;9816 9815 4776 2 PLSQGNSGRKDDGSK CSGSVTDKPLSQGNSG GRKDDGSKPTPTMETQ K P L S K P 0 1 1 2 0 1 0 3 0 0 1 2 0 0 1 3 0 0 0 0 0 0 15 2 1544.7543 Q9H4F8 Q9H4F8 166 180 SMOC1 SPARC-related modular calcium-binding protein 1 yes yes 2 0.0027767 78.505 By MS/MS 1 33388000 0 33388000 4247 2660 4748 10684 9817 9817 5422 1 PLTSPESLSR AAKAAGARPLTSPESL TSPESLSRDLEAPEVQ R P L S R D 0 1 0 0 0 0 1 0 0 0 2 0 0 0 2 3 1 0 0 0 0 0 10 0 1085.5717 A0A024RCR6;A0A0G2JK23;P46379 A0A024RCR6 1072 1081 BAT3;BAG6 Large proline-rich protein BAG6 yes no 2 0.0082974 93.561 By MS/MS By matching 1 1 7186300 3904800 3281400 4248 4 4749 10685;10686 9818 9818 6216 1 PLTSPLR TATPAEPRPLTSPLRQ RPLTSPLRQAADEDDK R P L L R Q 0 1 0 0 0 0 0 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 7 0 782.46504 P48634 P48634 805 811 PRRC2A Protein PRRC2A yes yes 2 0.015872 93.649 By MS/MS 1 25004000 25004000 0 4249 1718 4750 10687 9819 9819 3212;6713 1 PLTYSLTGSIQQSR QEGRWPSKPLTYSLTG TGSIQQSRSLGAQSSK K P L S R S 0 1 0 0 0 2 0 1 0 1 2 0 0 0 1 3 2 0 1 0 0 0 14 0 1549.81 Q8IWB4;Q5VU36 Q8IWB4 926 939 SPATA31A7;SPATA31A5 Spermatogenesis-associated protein 31A7;Spermatogenesis-associated protein 31A5 yes no 2 0.0065228 63.292 By MS/MS 1 0 0 0 4250 2267 4751 10688 9820 9820 4547;7785 1 PLYEGLGSGGEK ________________ GLGSGGEKTAVVIDLG M P L E K T 0 0 0 0 0 0 2 4 0 0 2 1 0 0 1 1 0 0 1 0 0 0 12 0 1205.5928 G3V4K6;G3V524;G3V2Q5;G3V5Y4;F6S9Y6;Q9NZ32 G3V4K6 2 13 ACTR10 Actin-related protein 10 yes no 2 1.0504E-09 145.46 By MS/MS By MS/MS 1 1 35811000 18610000 17202000 4251 903 4752 10689;10690 9821;9822 9821 7407 2 PMFIVNTNVPR ________________ IVNTNVPRASVPDGFL M P M P R A 0 1 2 0 0 0 0 0 0 1 0 0 1 1 2 0 1 0 0 2 0 0 11 0 1286.6805 P14174 P14174 2 12 MIF Macrophage migration inhibitory factor yes yes 2 0.0013238 105.4 By MS/MS By MS/MS 2 2 18532000 10736000 7795800 4252 1579 4753;4754 10691;10692;10693;10694 9823;9824;9825;9826 9826 194 4 PMKCNSGNISCLLK ICDLGKVRPMKCNSGN GNISCLLKNCSSGPSE R P M L K N 0 0 2 0 2 0 0 1 0 1 2 2 1 0 1 2 0 0 0 0 0 0 14 1 1620.7786 A0A087WUA7;A4D1E1 A0A087WUA7 805 818 ZNF804B Zinc finger protein 804B yes no 3 0.015587 58.674 By MS/MS 1 6925200 0 6925200 4253 43 4755 10695 9827 9827 73 1 PPYTVVYFPVR ________________ TVVYFPVRGRCAALRM M P P V R G 0 1 0 0 0 0 0 0 0 0 0 0 0 1 3 0 1 0 2 3 0 0 11 0 1336.718 A8MX94;P09211 A8MX94 2 12 GSTP1 Glutathione S-transferase P yes no 2 0.0021397 100.25 By MS/MS By matching 1 1 3396200 2474400 921840 4254 438 4756 10696;10697 9828 9828 1 PQKTSSLDYLWTSSLQR SSTLLQSKPQKTSSLD LWTSSLQRNQRSLSSP K P Q Q R N 0 1 0 1 0 2 0 0 0 0 3 1 0 0 1 4 2 1 1 0 0 0 17 1 2009.0218 A0A1B0GTH6 A0A1B0GTH6 220 236 yes yes 2 0.018274 55.452 By MS/MS 1 0 0 0 4255 362 4757 10698 9829 9829 672;673 1 PQTQPPSGSR NLPSNIPRPQTQPPSG TQPPSGSRPPSQHRSV R P Q S R P 0 1 0 0 0 2 0 1 0 0 0 0 0 0 3 2 1 0 0 0 0 0 10 0 1053.5203 Q96MY7 Q96MY7 145 154 FAM161B Protein FAM161B yes yes 1 0.024673 40.067 By MS/MS 1 923850 923850 0 4256 2517 4758 10699 9830 9830 1 PQYQTWEEFSR ________________ QTWEEFSRAAEKLYLA M P Q S R A 0 1 0 0 0 2 2 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 11 0 1469.6575 E9PE20;P49458 E9PE20 2 12 SRP9 Signal recognition particle 9 kDa protein yes no 2 0.0084647 76.282 By MS/MS By MS/MS 1 1 5427500 1824800 3602700 4257 771 4759 10700;10701 9831;9832 9832 2 PRPSFDQSVICNPAPPIRPSPPR P R P R 1 3 1 1 1 1 0 0 0 2 0 0 0 1 8 3 0 0 0 1 0 0 23 2 2584.3333 REV__H0YC66 yes no 3 0.013298 47.807 By MS/MS 1 1212600 0 1212600 + 4258 2976 4760 10702 9833 9833 6164 1 PSGGFVISGVLSPDTISSK ERIDYQGRPSGGFVIS SPDTISSKRKAKENIG R P S S K R 0 0 0 1 0 0 0 3 0 2 1 1 0 1 2 5 1 0 0 2 0 0 19 0 1846.9676 H0Y8J2;Q03188;H0Y9W1 H0Y8J2 669 687 CENPC Centromere protein C yes no 2 0.0016781 70.413 By MS/MS By MS/MS 1 1 3993600 2645100 1348600 4259 1041 4761 10703;10704 9834;9835 9834 1930 2 PSMSPTPLDR SRMSCFSRPSMSPTPL MSPTPLDRCRSPGMLE R P S D R C 0 1 0 1 0 0 0 0 0 0 1 0 1 0 3 2 1 0 0 0 0 0 10 0 1099.5332 Q9UQ35 Q9UQ35 2120 2129 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0030985 84.188 By MS/MS By MS/MS 1 1 9963700 5056200 4907600 4260 2877 4762 10705;10706 9836;9837 9836 5957;7107 2 PSRPPRPSR SLSNGGFKPSRPPRPS SRPPRPSRPPPPTPRR K P S S R P 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 9 2 1048.589 Q96J02 Q96J02 250 258 ITCH E3 ubiquitin-protein ligase Itchy homolog yes yes 3 0.0098759 69.864 By matching By MS/MS 1 2 9909500 3762900 6146600 4261 2504 4763 10707;10708;10709 9838;9839 9838 5040 1 PSSINYMVAPVTGNDVGIR PLQGLVARPSSINYMV TGNDVGIRRAEIKQGI R P S I R R 1 1 2 1 0 0 0 2 0 2 0 0 1 0 2 2 1 0 1 3 0 0 19 0 1988.999 G5EA09;O00560 G5EA09 106 124 SDCBP Syntenin-1 yes no 2 0.0020378 65.219 By MS/MS By MS/MS 1 1 5543800 3082000 2461700 4262 999 4764 10710;10711 9840;9841 9840 7431 2 PSSIPAPAEAEAWSPR SPGTTAPRPSSIPAPA EAEAWSPRKLPSSAST R P S P R K 4 1 0 0 0 0 2 0 0 1 0 0 0 0 4 3 0 1 0 0 0 0 16 0 1664.8158 D3YTB5;P51617;H7C1F0;F8WAB6 D3YTB5 144 159 IRAK1 Interleukin-1 receptor-associated kinase 1 yes no 2 0.00026432 87.138 By MS/MS By MS/MS 1 1 7478700 3438600 4040100 4263 640 4765 10712;10713 9842;9843 9842 1161 2 PSSLLGAAMPASTSAAALQEALENAGR ________________ EALENAGRLIDRQLQE M P S G R L 8 1 1 0 0 1 2 2 0 0 4 0 1 0 2 4 1 0 0 0 0 0 27 0 2583.2963 E9PF10;O75694;D6RA13 E9PF10 2 28 NUP155 Nuclear pore complex protein Nup155 yes no 3 0.0014838 55.789 By MS/MS 1 14561000 14561000 0 4264 775 4766 10714 9844 9844 93 1403 1 PSSSPVIFAGGQDR VTIPYRPKPSSSPVIF IFAGGQDRYSTGSDSA K P S D R Y 1 1 0 1 0 1 0 2 0 1 0 0 0 1 2 3 0 0 0 1 0 0 14 0 1416.6997 Q15366;H3BSS4 Q15366 186 199 PCBP2 Poly(rC)-binding protein 2 yes no 2 3.8205E-16 147.56 By MS/MS 1 15203000 0 15203000 4265 1985 4767 10715 9845 9845 3873;3874;3875 1 PSSVTALGQAR ________________ VTALGQARSSGPGMAP M P S A R S 2 1 0 0 0 1 0 1 0 0 1 0 0 0 1 2 1 0 0 1 0 0 11 0 1085.5829 I3L266;I3L3K8;I3L124;I3L1H1;Q86WA9 I3L266 2 12 SLC26A11 Sodium-independent sulfate anion transporter yes no 2 3.7667E-06 144.7 By MS/MS By MS/MS 1 1 5491900 2659600 2832300 4266 1204 4768 10716;10717 9846;9847 9847 2185 2 PSSYRALR GGGPGRGRPSSYRALR PSSYRALRSAVSSLAR R P S L R S 1 2 0 0 0 0 0 0 0 0 1 0 0 0 1 2 0 0 1 0 0 0 8 1 948.51411 Q15569 Q15569 38 45 TESK1 Dual specificity testis-specific protein kinase 1 yes yes 1 0.020385 58.815 By MS/MS By matching 1 1 34654000 24602000 10052000 4267 1995 4769 10718;10719 9848 9848 3894;7720 0 PSTPTINVLESK RLPNNSSRPSTPTINV TINVLESKDTDSDREA R P S S K D 0 0 1 0 0 0 1 0 0 1 1 1 0 0 2 2 2 0 0 1 0 0 12 0 1284.6925 Q15910 Q15910 365 376 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 2 0.013661 64.827 By MS/MS By matching 1 1 3608800 1523000 2085800 4268 2013 4770 10720;10721 9849 9849 3923 1 PSTQPRPDSWGEDNWEGLETDSR PFATLSARPSTQPRPD EGLETDSRQVKAELAR R P S S R Q 0 2 1 3 0 1 3 2 0 0 1 0 0 0 3 3 2 2 0 0 0 0 23 1 2658.1583 H0YDH0;E9PPN3;E9PS17;Q96KG9 H0YDH0 218 240 SCYL1 N-terminal kinase-like protein yes no 3 0.00066726 60.735 By MS/MS By MS/MS 1 1 9434300 5261400 4172900 4269 836 4771 10722;10723 9850;9851 9851 1513 2 PTEMGLDLEESLRKLIQYPYLQAFFETK EMANRDERPTEMGLDL LQAFFETKQHGRCFY_ R P T T K Q 1 1 0 1 0 2 4 1 0 1 5 2 1 2 2 1 2 0 2 0 0 0 28 2 3358.7159 E9PM29;E9PMV5;Q68D06 E9PM29 72 99 SLFN13 Schlafen family member 13 yes no 3 0.0019816 49.186 By MS/MS By matching 1 1 5283500 3399700 1883700 4270 826 4772 10724;10725 9852 9852 1472;6447;6448;7390 1 PTSRTQVYKPPALK FSTDTKGKPTSRTQVY VYKPPALKKSNSPGTA K P T L K K 1 1 0 0 0 1 0 0 0 0 1 2 0 0 3 1 2 0 1 1 0 0 14 2 1584.8988 Q96GY0 Q96GY0 162 175 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes yes 2 0.023048 47.201 By MS/MS 1 0 0 0 4271 2494 4773 10726 9853 9853 1 PTSSPAKGPPQK LGNILQAKPTSSPAKG PAKGPPQKAGPVAVQV K P T Q K A 1 0 0 0 0 1 0 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 12 1 1193.6404 Q13428;J3KQ96;E7ETY2 Q13428 580 591 TCOF1 Treacle protein yes no 2;3 3.7468E-10 147.7 By MS/MS By MS/MS 2 2 87405000 49560000 37846000 4272 1915 4774 10727;10728;10729;10730 9854;9855;9856;9857 9855 3684;3685;6796 4 PTSVEAKQK EKGQVQTKPTSVEAKQ TSVEAKQKPGPSFASW K P T Q K P 1 0 0 0 0 1 1 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 9 1 986.53966 A0A0A0MS79;O14513 A0A0A0MS79 1493 1501 NCKAP5 Nck-associated protein 5 yes no 2 0.0083617 81.972 By MS/MS 1 455800000 0 455800000 4273 209 4775 10731 9858 9858 381 1 PVDIVFLLDGSER SVAQCTQRPVDIVFLL FLLDGSERLGEQNFHK R P V E R L 0 1 0 2 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 2 0 0 13 0 1458.7718 P12110 P12110 831 843 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.00016072 116.55 By MS/MS By MS/MS 1 1 10659000 4406200 6252600 4274 1569 4776 10732;10733 9859;9860 9860 2 PVESPGDPNQLTR EPGALDAKPVESPGDP GDPNQLTRKGRKRKSV K P V T R K 0 1 1 1 0 1 1 1 0 0 1 0 0 0 3 1 1 0 0 1 0 0 13 0 1408.6947 Q96QC0 Q96QC0 379 391 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 2 0.015365 61.409 By matching By MS/MS 1 1 13141000 6790600 6350200 4275 2529 4777 10734;10735 9861 9861 5105 1 PVLSMDANSWQR AQFAAYWKPVLSMDAN MDANSWQRWLHMHRLV K P V Q R W 1 1 1 1 0 1 0 0 0 0 1 0 1 0 1 2 0 1 0 1 0 0 12 0 1402.6663 Q5T011 Q5T011 564 575 SZT2 Protein SZT2 yes yes 2 0.023495 57.55 By MS/MS By matching 1 1 2315100 1032400 1282700 4276 2091 4778 10736;10737 9862 9862 0 PVPDSPVSVTR TFALQHPRPVPDSPVS DSPVSVTRL_______ R P V T R L 0 1 0 1 0 0 0 0 0 0 0 0 0 0 3 2 1 0 0 3 0 0 11 0 1152.6139 G3XAC1;A0A0C4DFT5;Q9BXS9 G3XAC1 640 650 SLC26A6 Solute carrier family 26 member 6 yes no 2 0.003528 83.314 By MS/MS By MS/MS 1 1 7442800 4370500 3072300 4277 269 4779 10738;10739 9863;9864 9864 488 2 PVPDSPVSVTRL TFALQHPRPVPDSPVS SPVSVTRL________ R P V R L - 0 1 0 1 0 0 0 0 0 0 1 0 0 0 3 2 1 0 0 3 0 0 12 1 1265.698 G3XAC1;A0A0C4DFT5;Q9BXS9 G3XAC1 640 651 SLC26A6 Solute carrier family 26 member 6 yes no 2 0.0095353 76.262 By MS/MS By matching 2 1 6568800 3593600 2975200 4278 269 4780;4781 10740;10741;10742 9865;9866 9865 488 2 PYERQQFESVEWYNNR LEILRKYKPYERQQFE SVEWYNNRNQDNYVSW K P Y N R N 0 2 2 0 0 2 3 0 0 0 0 0 0 1 1 1 0 1 2 1 0 0 16 1 2143.9712 Q9UPY3 Q9UPY3 389 404 DICER1 Endoribonuclease Dicer yes yes 3 0.002583 75.445 By MS/MS 1 4381600 4381600 0 4279 2873 4782 10743 9867 9867 5938;7948 0 PYLRYMMLSDVK P Y V K 0 1 0 1 0 0 0 0 0 0 2 1 2 0 1 1 0 0 2 1 0 0 12 1 1514.7625 REV__A0A1B0GV45 yes yes 2 0.021377 53.034 By MS/MS By matching 1 1 2292100 1153900 1138200 + 4280 2964 4783 10744;10745 9868 9868 6149;7970 0 PYQYPALTPEQK ________________ PALTPEQKKELSDIAH M P Y Q K K 1 0 0 0 0 2 1 0 0 0 1 1 0 0 3 0 1 0 2 0 0 0 12 0 1433.7191 J3KPS3;P04075;H3BQN4;H3BUH7;H3BR04;H3BMQ8 J3KPS3 2 13 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0026338 95.483 By MS/MS By MS/MS 1 1 13984000 8213200 5771000 4281 1232 4784 10746;10747 9869;9870;9871 9871 3 PYQYPALTPEQKK ________________ ALTPEQKKELSDIAHR M P Y K K E 1 0 0 0 0 2 1 0 0 0 1 2 0 0 3 0 1 0 2 0 0 0 13 1 1561.814 J3KPS3;P04075;H3BQN4;H3BUH7;H3BR04;H3BMQ8 J3KPS3 2 14 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 3 0.012231 49.298 By MS/MS 1 2646700 2646700 0 4282 1232 4785 10748 9872 9872 1 QAALKSHYADVDPENQNFLLESNLGKK FNYSYPTKQAALKSHY LESNLGKKKYETEFNS K Q A K K K 3 0 3 2 0 2 2 1 1 0 4 3 0 1 1 2 0 0 1 1 0 0 27 2 3028.5254 F8VUY8;Q96QD8 F8VUY8 34 60 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 4 1.6894E-08 83.31 By matching By MS/MS 1 1 21566000 11934000 9631800 4283 919 4786 10749;10750 9873 9873 1652;7412 1 QADSEMTGYVVTR ILDFGLARQADSEMTG MTGYVVTRWYRAPEVI R Q A T R W 1 1 0 1 0 1 1 1 0 0 0 0 1 0 0 1 2 0 1 2 0 0 13 0 1455.6664 B5MDL5;P53778 B5MDL5 87 99 MAPK12 Mitogen-activated protein kinase 12 yes no 2;3 8.2418E-52 199.7 By MS/MS By MS/MS 3 3 71625000 39819000 31807000 4284 507 4787;4788 10751;10752;10753;10754;10755;10756 9874;9875;9876;9877;9878;9879;9880 9879 56 7297 7 QAFSMYEPGSALKPFGGPPGDELTTR GSTHRRDRQAFSMYEP PGDELTTRLQPFHSTE R Q A T R L 2 1 0 1 0 1 2 4 0 0 2 1 1 2 4 2 2 0 1 0 0 0 26 1 2752.3167 J3QRU8;Q9Y2X7;A0A0C4DGN6;J3QQI0 J3QRU8 505 530 GIT1 ARF GTPase-activating protein GIT1 yes no 3 0.0012241 54.626 By MS/MS By matching 1 1 5016200 2891700 2124500 4285 1258 4789 10757;10758 9881 9881 7481 1 QALDSEEEEEDVAAK GRPQALSRQALDSEEE EEEDVAAKETLLRLSS R Q A A K E 3 0 0 2 0 1 5 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 15 0 1661.7268 H7C3D5;Q8NC44 H7C3D5 76 90 FAM134A Protein FAM134A yes no 2 2.5942E-28 157.58 By MS/MS By MS/MS 1 1 52516000 29362000 23154000 4286 1179 4790 10759;10760 9882;9883 9883 2139 2 QALDSEEEEEDVAAKETLLR GRPQALSRQALDSEEE AAKETLLRLSSPLHFV R Q A L R L 3 1 0 2 0 1 6 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 20 1 2274.0863 H7C3D5;Q8NC44 H7C3D5 76 95 FAM134A Protein FAM134A yes no 2;3 1.0975E-49 159.04 By MS/MS By MS/MS 2 2 68085000 39069000 29015000 4287 1179 4791 10761;10762;10763;10764 9884;9885;9886;9887 9885 2139 4 QALDYVELSPLTQASPQR PRKADGQRQALDYVEL LTQASPQRARTPARTP R Q A Q R A 2 1 0 1 0 3 1 0 0 0 3 0 0 0 2 2 1 0 1 1 0 0 18 0 2015.0324 Q9H2D6;F6WYE2;F6TR96;H0Y5J9 Q9H2D6 1941 1958 TRIOBP TRIO and F-actin-binding protein yes no 2;3 9.958E-07 106.32 By MS/MS By MS/MS 2 2 14712000 8127900 6584300 4288 2642 4792 10765;10766;10767;10768 9888;9889;9890;9891 9888 7889 4 QALKSASTDLGTADVVLGR KHGNRGKRQALKSAST TADVVLGRVLEVTDLP R Q A G R V 3 1 0 2 0 1 0 2 0 0 3 1 0 0 0 2 2 0 0 2 0 0 19 1 1901.0218 H7C0E9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5 H7C0E9 614 632 R3HDM2 R3H domain-containing protein 2 yes no 3 0.00098779 71.263 By MS/MS By MS/MS 1 1 3320200 3320200 0 4289 350 4793 10769;10770 9892;9893 9893 644;645;6313 2 QALSDLMIKPVQR SMRENKEKQALSDLMI LMIKPVQRIPRYELLV K Q A Q R I 1 1 0 1 0 2 0 0 0 1 2 1 1 0 1 1 0 0 0 1 0 0 13 1 1497.8337 Q96PE2 Q96PE2 1200 1212 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes yes 2 0.0093458 80.916 By matching By MS/MS 1 1 11061000 5884700 5176800 4290 2523 4794 10771;10772 9894 9894 336 1 QAPAPTVIRDPPSITPAVKSPLPGPSEEK GTTPPQARQAPAPTVI LPGPSEEKTLQPSSQN R Q A E K T 3 1 0 1 0 1 2 1 0 2 1 2 0 0 8 3 2 0 0 2 0 0 29 2 2978.6077 Q13112 Q13112 439 467 CHAF1B Chromatin assembly factor 1 subunit B yes yes 4 0.0069559 43.462 By MS/MS By MS/MS 1 1 31753000 17022000 14732000 4291 1897 4795 10773;10774 9895;9896 9895 3622 2 QAPRAPQSPR QPSSASERQAPRAPQS PRAPQSPRRPPHPLPP R Q A P R R 2 2 0 0 0 2 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 10 1 1106.5945 P12270 P12270 2066 2075 TPR Nucleoprotein TPR yes yes 2 0.025571 64.224 By MS/MS By matching 1 1 16063000 5572100 10491000 4292 1570 4796 10775;10776 9897 9897 1 QAQAQESEEEEESR LDLEARERQAQAQESE SEEEEESRSTRTLEQE R Q A S R S 2 1 0 0 0 3 6 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 14 0 1648.6813 H0YLQ7;Q9NVM6 H0YLQ7 106 119 DNAJC17 DnaJ homolog subfamily C member 17 yes no 2 0.0022313 80.507 By MS/MS By matching 1 1 8258000 3796300 4461600 4293 1093 4797 10777;10778 9898 9898 2010 1 QAQIEVVPSASALIIK VKLTIQNRQAQIEVVP SASALIIKALKEPPRD R Q A I K A 3 0 0 0 0 2 1 0 0 3 1 1 0 0 1 2 0 0 0 2 0 0 16 0 1665.9665 P30050 P30050 68 83 RPL12 60S ribosomal protein L12 yes yes 2 0.00062917 84.605 By MS/MS By MS/MS 1 1 3577900 2185300 1392600 4294 1651 4798 10779;10780 9899;9900 9900 2 QAREESEESEAEPVQR GKASVSRKQAREESEE SEAEPVQRTAKKVEGN K Q A Q R T 2 2 0 0 0 2 6 0 0 0 0 0 0 0 1 2 0 0 0 1 0 0 16 1 1872.845 Q9BW71 Q9BW71 191 206 HIRIP3 HIRA-interacting protein 3 yes yes 3 0.0020631 67.56 By MS/MS By matching 1 1 17803000 9525200 8277900 4295 2589 4799 10781;10782 9901 9901 5234;5235 1 QASASYDSEEEEEGLPMSYDEK RQLKKGGKQASASYDS LPMSYDEKRQLSLDIN K Q A E K R 2 0 0 2 0 1 6 1 0 0 1 1 1 0 1 4 0 0 2 0 0 0 22 0 2493.0013 Q15059 Q15059 556 577 BRD3 Bromodomain-containing protein 3 yes yes 2 0.0003314 73.156 By MS/MS By matching 1 1 11603000 7563000 4040300 4296 1975 4800 10783;10784 9902 9902 3845;3846 1 QASASYDSEEEEEGLPMSYDEKR RQLKKGGKQASASYDS PMSYDEKRQLSLDINR K Q A K R Q 2 1 0 2 0 1 6 1 0 0 1 1 1 0 1 4 0 0 2 0 0 0 23 1 2649.1024 Q15059 Q15059 556 578 BRD3 Bromodomain-containing protein 3 yes yes 3 1.1762E-06 83.251 By MS/MS By MS/MS 2 1 91794000 58462000 33332000 4297 1975 4801;4802 10785;10786;10787 9903;9904;9905 9905 265 3845;3846 3 QASDTEEDDITDNQK NTGTLQFRQASDTEED DDITDNQKHKPPKVPK R Q A Q K H 1 0 1 4 0 2 2 0 0 1 0 1 0 0 0 1 2 0 0 0 0 0 15 0 1707.7071 Q6ZU65;C9J6Y5;H7C4P8 Q6ZU65 248 262 UBN2 Ubinuclein-2 yes no 2 0.0019948 76.522 By MS/MS By MS/MS 1 1 5483800 3526500 1957300 4298 2184 4803 10788;10789 9906;9907 9907 4358 1 QASEQLNSR GVNADSIKQASEQLNS ASEQLNSRWIEFCQLL K Q A S R W 1 1 1 0 0 2 1 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 9 0 1031.4996 E9PDN5;A0A075B6G3;P11532;A0A087WV90;A0A087WTU7 E9PDN5 799 807 DMD Dystrophin yes no 1 0.018395 57.177 By matching By MS/MS 1 1 10848000 6532000 4315700 4299 6 4804 10790;10791 9908 9908 10;11 0 QASFQER TPRSQLGRQASFQERS RQASFQERSSSRPHYS R Q A E R S 1 1 0 0 0 2 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 7 0 864.40898 F5H4N6;Q9Y3R0;H0YFK8;F5H4P8;F5H4Q7 F5H4N6 884 890 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.010929 99.013 By MS/MS 1 2500600 2500600 0 4300 885 4805 10792 9909 9909 1592 1 QASGTPQPALR EADLESLRQASGTPQP GTPQPALRERKSSISS R Q A L R E 2 1 0 0 0 2 0 1 0 0 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1124.5938 E9PFQ4;Q86SQ0;E9PDY7;G5E9V3 E9PFQ4 400 410 PHLDB2 Pleckstrin homology-like domain family B member 2 yes no 2 0.0030026 82.505 By MS/MS 1 0 0 0 4301 784 4806 10793 9910 9910 1410 1 QASLDGLQQLR GGGGRLLRQASLDGLQ LDGLQQLRDNMGSRRD R Q A L R D 1 1 0 1 0 3 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 11 0 1227.6571 Q3MII6 Q3MII6 504 514 TBC1D25 TBC1 domain family member 25 yes yes 2 6.1732E-41 193.62 By MS/MS By MS/MS 1 1 36505000 19940000 16565000 4302 2038 4807 10794;10795 9911;9912 9912 3993 2 QASLPVSGSVAGDFVK RARPPVQKQASLPVSG SVAGDFVKKATAFLQR K Q A V K K 2 0 0 1 0 1 0 2 0 0 1 1 0 1 1 3 0 0 0 3 0 0 16 0 1560.8148 F8W9F9;H0Y7T5;Q9Y3S1;H0Y7J9;H0Y493;H0Y7R3;E9PCD1 F8W9F9 1823 1838 WNK2 Serine/threonine-protein kinase WNK2 yes no 2 2.9888E-24 154.47 By MS/MS By MS/MS 1 1 33343000 20074000 13269000 4303 942 4808 10796;10797 9913;9914 9914 1709 2 QASLPVSGSVAGDFVKK RARPPVQKQASLPVSG VAGDFVKKATAFLQRP K Q A K K A 2 0 0 1 0 1 0 2 0 0 1 2 0 1 1 3 0 0 0 3 0 0 17 1 1688.9097 F8W9F9;H0Y7T5;Q9Y3S1;H0Y7J9;H0Y493;H0Y7R3;E9PCD1 F8W9F9 1823 1839 WNK2 Serine/threonine-protein kinase WNK2 yes no 3 0.02182 50.376 By MS/MS By MS/MS 1 1 1226400 0 1226400 4304 942 4809 10798;10799 9915;9916 9916 1709 2 QASPETSASPDGSQNLVYETELLR PLKVQYQRQASPETSA VYETELLRTQLNDSLK R Q A L R T 2 1 1 1 0 2 3 1 0 0 3 0 0 0 2 4 2 0 1 1 0 0 24 0 2591.2351 Q14789 Q14789 3008 3031 GOLGB1 Golgin subfamily B member 1 yes yes 3 0.00010925 70.345 By MS/MS By MS/MS 1 2 20998000 8452000 12546000 4305 1958 4810 10800;10801;10802 9917;9918 9918 3805 2 QASPTEVVER FNRTPGSRQASPTEVV SPTEVVERLGPNTNPS R Q A E R L 1 1 0 0 0 1 2 0 0 0 0 0 0 0 1 1 1 0 0 2 0 0 10 0 1114.5619 C9JW01;A0A0C4DG68;A0A0A0MR59;Q8TB72 C9JW01 180 189 PUM2 Pumilio homolog 2 yes no 2 2.1538E-05 140.78 By MS/MS By MS/MS 1 1 66609000 35942000 30666000 4306 171 4811 10803;10804 9919;9920 9920 303 2 QASQLSLESTVGPCGERS PATGPLLRQASQLSLE VGPCGERS________ R Q A R S - 1 1 0 0 1 2 2 2 0 0 2 0 0 0 1 4 1 0 0 1 0 0 18 1 1904.8898 Q9H426 Q9H426 252 269 RIMS4 Regulating synaptic membrane exocytosis protein 4 yes yes 2 2.0439E-05 95.954 By MS/MS By MS/MS 1 1 11635000 6635900 4998700 4307 2658 4812 10805;10806 9921;9922 9921 5421 2 QASSDSDSILSLK AAAACLSRQASSDSDS SDSILSLKSGISLGSP R Q A L K S 1 0 0 2 0 1 0 0 0 1 2 1 0 0 0 5 0 0 0 0 0 0 13 0 1349.6674 P25054 P25054 2127 2139 APC Adenomatous polyposis coli protein yes yes 2 0.0013352 96.371 By MS/MS By MS/MS 1 1 4326600 2867700 1458900 4308 1628 4813 10807;10808 9923;9924 9924 3012;3013 2 QASTDAGTAGALTPQHVR PEPKSHSRQASTDAGT ALTPQHVRAHSSPASL R Q A V R A 4 1 0 1 0 2 0 2 1 0 1 0 0 0 1 1 3 0 0 1 0 0 18 0 1779.8864 P46937 P46937 107 124 YAP1 Transcriptional coactivator YAP1 yes yes 2;3 5.2433E-09 114.99 By MS/MS By MS/MS 2 2 54667000 31804000 22863000 4309 1713 4814 10809;10810;10811;10812 9925;9926;9927 9927 3195;6709 3 QASTVEYLPGMLHSNCPK KRPNFVDRQASTVEYL MLHSNCPKGLLPKFSS R Q A P K G 1 0 1 0 1 1 1 1 1 0 2 1 1 0 2 2 1 0 1 1 0 0 18 0 2030.9554 Q8ND04 Q8ND04 740 757 SMG8 Protein SMG8 yes yes 2;3 0.0011429 71.286 By MS/MS By MS/MS 2 2 19893000 8764500 11129000 4310 2339 4815 10813;10814;10815;10816 9928;9929;9930 9928 4688;6964 3 QASVTLQPLK KRKLADGRQASVTLQP SVTLQPLKIKKLIPNP R Q A L K I 1 0 0 0 0 2 0 0 0 0 2 1 0 0 1 1 1 0 0 1 0 0 10 0 1083.6288 P78345 P78345 251 260 RPP38 Ribonuclease P protein subunit p38 yes yes 2 0.016813 65.695 By matching By MS/MS 1 1 3011200 2043300 967960 4311 1814 4816 10817;10818 9931 9931 3384 1 QATPGVPAQQSPSM GAMYTLPRQATPGVPA PAQQSPSM________ R Q A S M - 2 0 0 0 0 3 0 1 0 0 0 0 1 0 3 2 1 0 0 1 0 0 14 0 1397.6609 O60341 O60341 839 852 KDM1A Lysine-specific histone demethylase 1A yes yes 2 0.0033407 72.815 By MS/MS By matching 1 1 14048000 6174500 7873400 4312 1406 4817 10819;10820 9932 9932 169 2585 1 QAVEMKNDKSEEEQSSSSVK KIEKEQSKQAVEMKND EQSSSSVKKDETNVKM K Q A V K K 1 0 1 1 0 2 4 0 0 0 0 3 1 0 0 5 0 0 0 2 0 0 20 2 2239.0274 G3V5V7;G3V2D6;G3V4W0;B4DY08;B2R5W2;P07910 G3V5V7 108 127 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 3 0.0019198 67.252 By MS/MS 1 5854500 5854500 0 4313 471 4818 10821 9933 9933 897 1 QAYEPPPPPAYR HASRRPDRQAYEPPPP PPPPPAYRTGSLKPNP R Q A Y R T 2 1 0 0 0 1 1 0 0 0 0 0 0 0 5 0 0 0 2 0 0 0 12 0 1384.6776 Q15654;A0A0D9SFS2 Q15654 121 132 TRIP6 Thyroid receptor-interacting protein 6 yes no 2 5.0986E-07 122.94 By MS/MS By MS/MS 1 1 18448000 9975700 8472500 4314 2000 4819 10822;10823 9934;9935 9935 7722 2 QCEGITSPEGSK VSMVGQVKQCEGITSP ITSPEGSKSIVEGIIE K Q C S K S 0 0 0 0 1 1 2 2 0 1 0 1 0 0 1 2 1 0 0 0 0 0 12 0 1291.5714 Q9Y570 Q9Y570 237 248 PPME1 Protein phosphatase methylesterase 1 yes yes 2 0.011885 70.563 By MS/MS By MS/MS 1 1 6579400 4144400 2435100 4315 2925 4820 10824;10825 9936;9937 9936 1 QCHALQEDMQTRSK AIYAEMSRQCHALQED EDMQTRSKQLEEEVKG R Q C S K Q 1 1 0 1 1 3 1 0 1 0 1 1 1 0 0 1 1 0 0 0 0 0 14 1 1730.7828 Q494R4 Q494R4 90 103 CCDC153 Coiled-coil domain-containing protein 153 yes yes 3 0.0020018 67.252 By matching By MS/MS 1 1 54787000 28926000 25860000 4316 2042 4821 10826;10827 9938 9938 274 6857 1 QDDSPPRPIIGPALPPGFIK ALPPGFKKQDDSPPRP ALPPGFIKSTQKSDKG K Q D I K S 1 1 0 2 0 1 0 2 0 3 1 1 0 1 6 1 0 0 0 0 0 0 20 1 2114.1524 A0A0A0MRI1;Q8IXQ4 A0A0A0MRI1 100 119 GPALPP1 GPALPP motifs-containing protein 1 yes no 3 2.02E-08 91.401 By MS/MS By MS/MS 1 1 51432000 31512000 19920000 4317 186 4822 10828;10829 9939;9940;9941;9942;9943 9939 328 5 QDHAQQLATAAEER AEKQEATRQDHAQQLA LATAAEEREASLRERD R Q D E R E 4 1 0 1 0 3 2 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 14 0 1566.7386 A0A087WY61;Q14980;F5H6Y5;F5H4J1 A0A087WY61 579 592 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.020631 61.65 By matching By MS/MS 1 1 9513500 5899700 3613800 4318 95 4823 10830;10831 9944 9944 1 QDLLFLDMLK LAEEYLSKQDLLFLDM LLFLDMLKFLCLCVTT K Q D L K F 0 0 0 2 0 1 0 0 0 0 4 1 1 1 0 0 0 0 0 0 0 0 10 0 1234.6631 E9PIN0;Q13315 E9PIN0 893 902 ATM Serine-protein kinase ATM yes no 3 0.0066662 68.557 By MS/MS 1 1664400 0 1664400 4319 802 4824 10832 9945 9945 1 QDNPRTSSPNRATR NLRTSCTRQDNPRTSS SSPNRATRDNPRTSCA R Q D T R D 1 3 2 1 0 1 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 14 2 1598.7873 Q9H2D6 Q9H2D6 775 788 TRIOBP TRIO and F-actin-binding protein yes yes 2 0.026729 48.131 By MS/MS 1 0 0 0 4320 2642 4825 10833 9946 9946 1 QDPVTYISETDEEDDFMCKK SKPGKISRQDPVTYIS EDDFMCKKAASKSKEN R Q D K K A 0 0 0 4 1 1 3 0 0 1 0 2 1 1 1 1 2 0 1 1 0 0 20 1 2449.0301 P35251;D6RAD2 P35251 101 120 RFC1 Replication factor C subunit 1 yes no 3 0.013674 45.608 By matching By MS/MS 1 1 30814000 18621000 12193000 4321 1669 4826 10834;10835 9947 9947 3072;6697 1 QDSLVINLNR KEKEGIVKQDSLVINL SLVINLNRSNPKLKDL K Q D N R S 0 1 2 1 0 1 0 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1170.6357 Q9Y5B9 Q9Y5B9 648 657 SUPT16H FACT complex subunit SPT16 yes yes 2 0.0060867 88.596 By MS/MS 1 0 0 0 4322 2928 4827 10836 9948 9948 6083 1 QDSMEALQMDR PAPPRVKRQDSMEALQ MEALQMDRSGSGKTVS R Q D D R S 1 1 0 2 0 2 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 11 0 1322.5595 Q8TDR0 Q8TDR0 474 484 TRAF3IP1 TRAF3-interacting protein 1 yes yes 2 0.0030335 86.262 By MS/MS By MS/MS 1 1 4379900 2806000 1573900 4323 2382 4828 10837;10838 9949;9950 9949 4766 2 QDSRYYSDREK HRDWDHYKQDSRYYSD RYYSDREKHRKLDDHR K Q D E K H 0 2 0 2 0 1 1 0 0 0 0 1 0 0 0 2 0 0 2 0 0 0 11 2 1445.6535 O14646 O14646 1593 1603 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 2 0.019922 46.406 By MS/MS 1 0 0 0 4324 1342 4829 10839 9951 9951 2432;2433;7500 1 QDSWEVVEGLR CSSKQGSRQDSWEVVE WEVVEGLRGEMNYTQE R Q D L R G 0 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 1 0 2 0 0 11 0 1316.6361 Q9H4L5;C9J8P4;C9JEF2;C9JZ19 Q9H4L5 32 42 OSBPL3 Oxysterol-binding protein-related protein 3 yes no 2 0.020604 62.298 By MS/MS 1 821250 0 821250 4325 2661 4830 10840 9952 9952 5423 1 QDVYGPQPQVR EGYRAPSRQDVYGPQP YGPQPQVRVGGSSVDL R Q D V R V 0 1 0 1 0 3 0 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 11 0 1285.6415 C9JZR2;O60716;E9PRE2 C9JZR2 254 264 CTNND1 Catenin delta-1 yes no 2;3 1.9901E-30 187.22 By MS/MS By MS/MS 3 2 298310000 175640000 122670000 4326 624 4831 10841;10842;10843;10844;10845 9953;9954;9955;9956;9957 9956 7331 5 QEAGGLGISIK VRRVRVVKQEAGGLGI GGLGISIKGGRENRMP K Q E I K G 1 0 0 0 0 1 1 3 0 2 1 1 0 0 0 1 0 0 0 0 0 0 11 0 1071.5924 Q13425;A0A140TA73 Q13425 121 131 SNTB2 Beta-2-syntrophin yes no 2 0.00015533 113.37 By MS/MS By MS/MS 1 1 5137200 2530000 2607200 4327 1914 4832 10846;10847 9958;9959 9958 3674 2 QEAIPDLEDSPPVSDSEEQQESAR ESKKTAPRQEAIPDLE EEQQESARAVPEKSTA R Q E A R A 2 1 0 3 0 3 5 0 0 1 1 0 0 0 3 4 0 0 0 1 0 0 24 0 2655.1784 Q9BTC0 Q9BTC0 796 819 DIDO1 Death-inducer obliterator 1 yes yes 3 2.8101E-14 101.6 By MS/MS By MS/MS 1 2 40986000 19368000 21618000 4328 2576 4833 10848;10849;10850 9960;9961 9961 5203;5204 2 QEDGGVYSSSGLK ISDFGMSRQEDGGVYS VYSSSGLKQIPIKWTA R Q E L K Q 0 0 0 1 0 1 1 3 0 0 1 1 0 0 0 3 0 0 1 1 0 0 13 0 1325.6099 W0S4B9;P16591 W0S4B9 297 309 Pe1Fe10;FER Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Fer yes no 2 1.4775E-12 152.64 By MS/MS By MS/MS 1 1 18565000 9750700 8814600 4329 1587 4834 10851;10852 9962;9963 9963 2915;7567 2 QEELNNQLFLYDTHQNLR SCRQLRRRQEELNNQL YDTHQNLRNANRDALV R Q E L R N 0 1 3 1 0 3 2 0 1 0 4 0 0 1 0 0 1 0 1 0 0 0 18 0 2274.1029 A0A0A0MRF9;P16885 A0A0A0MRF9 1207 1224 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 3 0.0063797 51.265 By MS/MS By matching 1 1 4532700 2613400 1919300 4330 183 4835 10853;10854 9964 9964 7197 1 QEEMNSQQEEEEMETDAR ILQLKESRQEEMNSQQ EEMETDARSSLGQSAS R Q E A R S 1 1 1 1 0 3 7 0 0 0 0 0 2 0 0 1 1 0 0 0 0 0 18 0 2211.8532 E9PJ04;H0YCG1;E9PPJ0;Q13435 E9PJ04 282 299 SF3B2 Splicing factor 3B subunit 2 yes no 2 0.0038848 82.543 By MS/MS 1 0 0 0 4331 805 4836 10855 9965 9965 1442 1 QEISRLQK KILEETHKQEISRLQK QEISRLQKRLQWYAEN K Q E Q K R 0 1 0 0 0 2 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 1 1000.5665 Q5TB80 Q5TB80 853 860 CEP162 Centrosomal protein of 162 kDa yes yes 2 0.013342 88.681 By matching By MS/MS 1 1 6282700 3250500 3032200 4332 2107 4837 10856;10857 9966 9966 4161 1 QEKPAEKPAETPVATSPTATDSTSGDSSR PAPASAAKQEKPAEKP STSGDSSRSNLFEDAT K Q E S R S 4 1 0 2 0 1 3 1 0 0 0 2 0 0 4 5 5 0 0 1 0 0 29 2 2944.3898 H0Y579;P54727 H0Y579 15 43 RAD23B UV excision repair protein RAD23 homolog B yes no 3 1.5219E-11 87.352 By matching By MS/MS 1 1 124180000 73095000 51090000 4333 1024 4838 10858;10859 9967 9967 1902;6512 1 QELGSPEER RNFEDRERQELGSPEE ELGSPEERLQDSSDPD R Q E E R L 0 1 0 0 0 1 3 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 9 0 1043.4884 V9GYM8;Q92974;V9GYF0 V9GYM8 973 981 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.0045446 87.667 By MS/MS By MS/MS 1 1 6235000 3636100 2598900 4334 2450 4839 10860;10861 9968;9969 9968 4936 2 QELNQMLAETPPVWKGSSK KTWKSLSKQELNQMLA PVWKGSSKLFRNLKEK K Q E S K L 1 0 1 0 0 2 2 1 0 0 2 2 1 0 2 2 1 1 0 1 0 0 19 1 2142.0779 H0YB82;H0YAN7;Q86XE3 H0YB82 29 47 MICU3 Calcium uptake protein 3, mitochondrial yes no 3 0.01693 40.856 By MS/MS By matching 1 1 12930000 7673700 5256400 4335 1050 4840 10862;10863 9970 9970 127 1953 1 QELQDERDSLAAQLEITLTK GKELQQKKQELQDERD QLEITLTKADSEQLAR K Q E T K A 2 1 0 2 0 3 3 0 0 1 4 1 0 0 0 1 2 0 0 0 0 0 20 1 2300.186 Q14DU5;E9PF63;O75116 Q14DU5 217 236 ROCK2 Rho-associated protein kinase 2 yes no 3 0.023997 48.053 By MS/MS 1 0 0 0 4336 776 4841 10864 9971 9971 1 QENCGAQQVPAGPGTSTPPSSPVR TAAEGAPRQENCGAQQ TPPSSPVRTCGPLTDE R Q E V R T 2 1 1 0 1 3 1 3 0 0 0 0 0 0 5 3 2 0 0 2 0 0 24 0 2421.1343 Q96G46 Q96G46 257 280 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 2 0.0081827 52.754 By MS/MS By MS/MS 1 1 8021800 4942700 3079100 4337 2487 4842 10865;10866 9972;9973 9972 5013;5014;5015 2 QEPIESDEEEAEPPREVEPGQR AQAGVQVKQEPIESDE REVEPGQRQPSEQELL K Q E Q R Q 1 2 0 1 0 2 8 1 0 1 0 0 0 0 4 1 0 0 0 1 0 0 22 1 2549.1518 P56524 P56524 560 581 HDAC4 Histone deacetylase 4 yes yes 3 0.0044879 51.942 By MS/MS By MS/MS 1 1 18086000 9884900 8200900 4338 1777 4843 10867;10868 9974;9975 9975 3350 2 QEPLGSDSEGVNCLAYDEAIMAQQDR AEEPQQQKQEPLGSDS AIMAQQDRIQQEFMDL K Q E D R I 3 1 1 3 1 3 3 2 0 1 2 0 1 0 1 2 0 0 1 1 0 0 26 0 2895.2651 F5H3F0;J3KR44;F5H6Q1;F5GYJ8;Q96FW1 F5H3F0 11 36 OTUB1 Ubiquitin thioesterase OTUB1 yes no 3 0.016415 42.172 By MS/MS By matching 1 1 12450000 6311400 6138200 4339 862 4844 10869;10870 9976 9976 1551;1552 1 QEPLRQPSPQR YYRKDKRRQEPLRQPS LRQPSPQRGAGAPELG R Q E Q R G 0 2 0 0 0 3 1 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 11 1 1334.7055 Q9NZ94 Q9NZ94 738 748 NLGN3 Neuroligin-3 yes yes 2 0.00091578 79.036 By MS/MS 1 29146000 29146000 0 4340 2765 4845 10871 9977 9977 5678 1 QEQAPVEDAGPTGANEDDSDVPAVVPLSEYDAVER RKKRPDGKQEQAPVED SEYDAVEREKMEAQQA K Q E E R E 5 1 1 5 0 2 5 2 0 0 1 0 0 0 4 2 1 0 1 5 0 0 35 0 3668.6602 Q02952 Q02952 823 857 AKAP12 A-kinase anchor protein 12 yes yes 3 0.0051269 44.898 By matching By MS/MS 1 1 19894000 12119000 7774100 4341 1843 4846 10872;10873 9978 9978 3458 1 QEQINTEPLEDTVLSPTK EPEDKTVKQEQINTEP DTVLSPTKKRKRQKGT K Q E T K K 0 0 1 1 0 2 3 0 0 1 2 1 0 0 2 1 3 0 0 1 0 0 18 0 2041.0215 O15446 O15446 271 288 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 2;3 9.8295E-06 85.376 By MS/MS By MS/MS 2 2 69709000 37306000 32403000 4342 1368 4847 10874;10875;10876;10877 9979;9980;9981;9982 9982 2502;6606;6607 4 QEQINTEPLEDTVLSPTKK EPEDKTVKQEQINTEP TVLSPTKKRKRQKGTE K Q E K K R 0 0 1 1 0 2 3 0 0 1 2 2 0 0 2 1 3 0 0 1 0 0 19 1 2169.1165 O15446 O15446 271 289 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 3 0.0020876 61.345 By MS/MS By MS/MS 1 1 7371200 4232400 3138700 4343 1368 4848 10878;10879 9983;9984 9984 2502;6606;6607 2 QERLSPEVAPPAHR LPAGVVVKQERLSPEV EVAPPAHRRPDHSGGS K Q E H R R 2 2 0 0 0 1 2 0 1 0 1 0 0 0 3 1 0 0 0 1 0 0 14 1 1585.8325 Q8TAD8 Q8TAD8 31 44 SNIP1 Smad nuclear-interacting protein 1 yes yes 3 5.9773E-21 158.65 By MS/MS By MS/MS 1 1 39760000 20242000 19517000 4344 2367 4849 10880;10881 9985;9986 9986 4743 2 QESDPEDDDVKKPALQSSVVATSK RRTRRESRQESDPEDD SSVVATSKERTRRDLI R Q E S K E 2 0 0 4 0 2 2 0 0 0 1 3 0 0 2 4 1 0 0 3 0 0 24 2 2572.2504 Q9H307 Q9H307 98 121 PNN Pinin yes yes 3 1.1096E-09 91.166 By MS/MS By MS/MS 1 1 134400000 72544000 61856000 4345 2651 4850 10882;10883 9987;9988 9987 5405 2 QESEGSDLLENHIKK GIIRPYDRQESEGSDL LLENHIKKLEGETYRY R Q E K K L 0 0 1 1 0 1 3 1 1 1 2 2 0 0 0 2 0 0 0 0 0 0 15 1 1725.8533 Q709C8 Q709C8 3612 3626 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 2 0.020283 48.981 By MS/MS 1 0 0 0 4346 2189 4851 10884 9989 9989 1 QETEVELYNEFPEPIK TIARNALKQETEVELY NEFPEPIKLDKNDRAK K Q E I K L 0 0 1 0 0 1 5 0 0 1 1 1 0 1 2 0 1 0 1 1 0 0 16 0 1963.9415 C9J8S3;P51149;C9J4S4;C9J4V0 C9J8S3 129 144 RAB7A Ras-related protein Rab-7a yes no 2;3 7.4324E-24 150.14 By MS/MS By MS/MS 2 1 9290900 6607000 2683800 4347 571 4852 10885;10886;10887 9990;9991;9992 9990 7317 2 QEVAPVQYNIVEQNK WKPLGQQKQEVAPVQY YNIVEQNKLNKDYRAN K Q E N K L 1 0 2 0 0 3 2 0 0 1 0 1 0 0 1 0 0 0 1 3 0 0 15 0 1757.8948 A0A0A0MSX4;Q9Y6N7;A0A087WZ85;A0A087WTM1 A0A0A0MSX4 987 1001 ROBO1 Roundabout homolog 1 yes no 2;3 1.646E-09 122.18 By MS/MS By MS/MS 2 2 21540000 11351000 10189000 4348 228 4853 10888;10889;10890;10891 9993;9994;9995;9996;9997 9996 7207 5 QEVAPVQYNIVEQNKLNKDYR WKPLGQQKQEVAPVQY NKLNKDYRANDTVPPT K Q E Y R A 1 1 3 1 0 3 2 0 0 1 1 2 0 0 1 0 0 0 2 3 0 0 21 2 2547.3082 A0A0A0MSX4;Q9Y6N7;A0A087WZ85;A0A087WTM1 A0A0A0MSX4 987 1007 ROBO1 Roundabout homolog 1 yes no 3 0.0024342 52.866 By MS/MS By MS/MS 1 1 11834000 5064000 6769700 4349 228 4854 10892;10893 9998;9999 9999 7207;7208 2 QEVNVPAGETSVRLR GQPLPSERQEVNVPAG GETSVRLRGLRPLTEY R Q E L R G 1 2 1 0 0 1 2 1 0 0 1 0 0 0 1 1 1 0 0 3 0 0 15 1 1653.8798 Q02388 Q02388 281 295 COL7A1 Collagen alpha-1(VII) chain yes yes 4 0.016733 42.317 By MS/MS 1 40240000 0 40240000 4350 1840 4855 10894 10000 10000 3444 1 QEYATSTLWQNDLLKEATR Q E T R 2 1 1 1 0 2 2 0 0 0 3 1 0 0 0 1 3 1 1 0 0 0 19 1 2266.123 REV__A0A0C4DH60 yes yes 3 0.0068919 50.178 By matching By MS/MS 1 1 10954000 6131400 4822600 + 4351 2962 4856 10895;10896 10001 10001 7969 1 QEYDESGPSIVHR FQQMWISKQEYDESGP SGPSIVHRKCF_____ K Q E H R K 0 1 0 1 0 1 2 1 1 1 0 0 0 0 1 2 0 0 1 1 0 0 13 0 1515.6954 P63261;P60709;Q6S8J3;A5A3E0;P0CG38;Q9BYX7;P0CG39 P63261 360 372 ACTG1;ACTB;POTEE;POTEF;POTEI;POTEKP;POTEJ Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J yes no 3 0.026017 53.869 By MS/MS 1 2489100 0 2489100 4352 1785 4857 10897 10002 10002 0 QFEMENSLSDPENEQTVQKR PRIFLKQKQFEMENSL NEQTVQKRKSNVVIQE K Q F K R K 0 1 2 1 0 3 4 0 0 0 1 1 1 1 1 2 1 0 0 1 0 0 20 1 2408.0914 A0A075B754;Q96QE3 A0A075B754 348 367 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 0.0021308 57.171 By MS/MS By MS/MS 1 1 15528000 8847100 6680600 4353 12 4858 10898;10899 10003;10004 10003 27 2 QFKDLFDLNSSEEDDTEGFSER DRKDEDRKQFKDLFDL DTEGFSERGILRPLST K Q F E R G 0 1 1 4 0 1 4 1 0 0 2 1 0 3 0 3 1 0 0 0 0 0 22 1 2607.1249 Q9Y3T9 Q9Y3T9 663 684 NOC2L Nucleolar complex protein 2 homolog yes yes 2;3 2.5944E-13 115.09 By MS/MS By MS/MS 3 3 378070000 246220000 131850000 4354 2912 4859;4860 10900;10901;10902;10903;10904;10905 10005;10006;10007;10008 10007 6054;6055 4 QFLISPPASPPVGWK LLPPQPVKQFLISPPA ASPPVGWKQSEDAMPV K Q F W K Q 1 0 0 0 0 1 0 1 0 1 1 1 0 1 4 2 0 1 0 1 0 0 15 0 1622.8821 H0YF64;V9GYW9;E9PD55;E9PDJ2;Q9UKA8;P53805 H0YF64 11 25 RCAN3;RCAN1 Calcipressin-3;Calcipressin-1 yes no 2 0.00032588 88.706 By MS/MS By matching 1 1 15028000 8926600 6101000 4355 768 4861 10906;10907 10009 10009 1391;1392 1 QFLRQNTGDDQTS MATSYFGKQFLRQNTG NTGDDQTS________ K Q F T S - 0 1 1 2 0 3 0 1 0 0 1 0 0 1 0 1 2 0 0 0 0 0 13 1 1508.6855 J3QL63;J3QL47;C9JYS5;Q9NYZ1 J3QL63 129 141 TVP23B;TVP23C Golgi apparatus membrane protein TVP23 homolog;Golgi apparatus membrane protein TVP23 homolog B yes no 2 0.0055997 107.53 By MS/MS By matching 1 1 24449000 13004000 11445000 4356 620 4862 10908;10909 10010 10010 6385 1 QFPPSPSAPK KGLLLNRRQFPPSPSA PPSPSAPKIPSWQIPV R Q F P K I 1 0 0 0 0 1 0 0 0 0 0 1 0 1 4 2 0 0 0 0 0 0 10 0 1054.5447 O75381 O75381 228 237 PEX14 Peroxisomal membrane protein PEX14 yes yes 2 0.0034148 83.137 By MS/MS By MS/MS 1 1 5837200 3084100 2753100 4357 1436 4863 10910;10911 10011;10012 10011 2645 2 QFSLENVQEGEILHDAK SEERHTKKQFSLENVQ GEILHDAKTLAGNVIA K Q F A K T 1 0 1 1 0 2 3 1 1 1 2 1 0 1 0 1 0 0 0 1 0 0 17 0 1955.9589 O75113 O75113 298 314 N4BP1 NEDD4-binding protein 1 yes yes 3 1.7529E-05 87.669 By MS/MS By MS/MS 1 1 7915700 5239300 2676400 4358 1428 4864 10912;10913 10013;10014 10014 2629 2 QFSPTMSPTLSSITQGVPLDTSK RSQQQLPKQFSPTMSP GVPLDTSKLSTDQRLP K Q F S K L 0 0 0 1 0 2 0 1 0 1 2 1 1 1 3 5 4 0 0 1 0 0 23 0 2421.2097 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 454 476 CRTC2 CREB-regulated transcription coactivator 2 yes no 3 0.020174 40.88 By matching By MS/MS 1 1 16467000 10411000 6055600 4359 2054 4865 10914;10915 10015 10015 4039 1 QFSTASDHEQPGVSG KDQKKVERQFSTASDH HEQPGVSG________ R Q F S G - 1 0 0 1 0 2 1 2 1 0 0 0 0 1 1 3 1 0 0 1 0 0 15 0 1545.6696 Q66K14;G3V133 Q66K14 1236 1250 TBC1D9B TBC1 domain family member 9B yes no 2 0.0065492 79.639 By MS/MS By matching 2 1 95550000 51233000 44317000 4360 2130 4866 10916;10917;10918 10016;10017 10016 6896 2 QGAIYHGLATLLNQPSPMMQR VVTLEVAKQGAIYHGL QPSPMMQRISDRRGSG K Q G Q R I 2 1 1 0 0 3 0 2 1 1 3 0 2 0 2 1 1 0 1 0 0 0 21 0 2325.1722 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1051 1071 MLLT4 Afadin yes no 3 0.00010881 75.215 By MS/MS By matching 2 2 13204000 10867000 2337600 4361 431 4867;4868 10919;10920;10921;10922 10018;10019 10019 817 2 QGEQETKNRSASEEQALSQDGSGEK NTGNQDSKQGEQETKN SQDGSGEKPMHTAPPQ K Q G E K P 2 1 1 1 0 4 5 3 0 0 1 2 0 0 0 4 1 0 0 0 0 0 25 2 2692.2172 Q5SQI0 Q5SQI0 356 380 ATAT1 Alpha-tubulin N-acetyltransferase 1 yes yes 3 0.014844 41.798 By matching By MS/MS 1 1 8765000 4301300 4463700 4362 2086 4869 10923;10924 10020 10020 4111;4112 1 QGGLGPMNIPLVSDPK AWVNTPKKQGGLGPMN IPLVSDPKRTIAQDYG K Q G P K R 0 0 1 1 0 1 0 3 0 1 2 1 1 0 3 1 0 0 0 1 0 0 16 0 1621.8498 A0A0A0MSI0;Q06830 A0A0A0MSI0 94 109 PRDX1 Peroxiredoxin-1 yes no 2 0.021959 57.52 By MS/MS By matching 1 1 1685100 954920 730170 4363 214 4870 10925;10926 10021 10021 0 QGGSQPSSFSPGQSQVTPQDQEK GGIQGASKQGGSQPSS VTPQDQEKAALIMQVL K Q G E K A 0 0 0 1 0 6 1 3 0 0 0 1 0 1 3 5 1 0 0 1 0 0 23 0 2403.0939 Q9H0L4 Q9H0L4 554 576 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 3 0.00050177 63.225 By MS/MS 1 7079000 7079000 0 4364 2630 4871 10927 10022;10023 10023 5351;5352 2 QGNFFASPMLK KSATNLGRQGNFFASP FFASPMLK________ R Q G L K - 1 0 1 0 0 1 0 1 0 0 1 1 1 2 1 1 0 0 0 0 0 0 11 0 1238.6118 Q9H0H5 Q9H0H5 622 632 RACGAP1 Rac GTPase-activating protein 1 yes yes 2 8.8945E-06 137.62 By MS/MS By MS/MS 1 1 9770500 5516800 4253700 4365 2628 4872 10928;10929 10024;10025 10024 5344 2 QGPPCSDSEEEVER KGKKKCQKQGPPCSDS DSEEEVERKKKCHKQA K Q G E R K 0 1 0 1 1 1 4 1 0 0 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1617.6577 E9PPY3;O43159 E9PPY3 99 112 RRP8 Ribosomal RNA-processing protein 8 yes no 2 0.016236 61.641 By MS/MS 1 0 0 0 4366 837 4873 10930 10026 10026 1514;1515 1 QGPVSQSATQQPVTADKQQGHEPVSPR KVSTPVVKQGPVSQSA GHEPVSPRSLQRSSSQ K Q G P R S 2 1 0 1 0 6 1 2 1 0 0 1 0 0 4 3 2 0 0 3 0 0 27 1 2856.4114 A0A0A0MRT2;Q9BTA9 A0A0A0MRT2 335 361 WAC WW domain-containing adapter protein with coiled-coil yes no 3 0.0085917 46.46 By MS/MS By MS/MS 1 1 52145000 31834000 20311000 4367 200 4874 10931;10932 10027;10028 10028 365 2 QGQSQAASSSSVTSPIK AQVEQQHKQGQSQAAS SSVTSPIKMKIPIANT K Q G I K M 2 0 0 0 0 3 0 1 0 1 0 1 0 0 1 6 1 0 0 1 0 0 17 0 1661.822 O60583 O60583 467 483 CCNT2 Cyclin-T2 yes yes 2 3.0001E-69 193.3 By MS/MS By MS/MS 1 1 29729000 16946000 12783000 4368 1414 4875 10933;10934 10029;10030 10030 2604;6624 2 QGSDEWGGPAELGPGEAGPGWQDKPPR PEPSYHSRQGSDEWGG GWQDKPPRENGHVPFH R Q G P R E 2 1 0 2 0 2 3 7 0 0 1 1 0 0 5 1 0 2 0 0 0 0 27 1 2774.2685 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3;M0QY61 M0QZ22 170 196 SAMD4B Protein Smaug homolog 2 yes no 3 2.0163E-06 75.539 By MS/MS By MS/MS 1 1 20649000 9985600 10664000 4369 1308 4876 10935;10936 10031;10032 10032 2349 2 QGSFRGFPALSQK APIEQLARQGSFRGFP GFPALSQKMSPFKRQL R Q G Q K M 1 1 0 0 0 2 0 2 0 0 1 1 0 2 1 2 0 0 0 0 0 0 13 1 1421.7415 G3V3Z8;P49757;A0A0C4DGH3;Q9Y6R0 G3V3Z8 130 142 NUMB;NUMBL Protein numb homolog;Numb-like protein no no 2 0.012124 65.809 By matching By MS/MS 1 1 11845000 6381300 5463800 4370 972;293 4877 10937;10938 10033 10033 522 1 QGSFTIEKPSPNIPIELIPHINK ESSKSLVRQGSFTIEK ELIPHINKQTSSTPSS R Q G N K Q 0 0 2 0 0 1 2 1 1 5 1 2 0 1 4 2 1 0 0 0 0 0 23 1 2571.4061 H0Y2V6;Q5SW79 H0Y2V6 800 822 CEP170 Centrosomal protein of 170 kDa yes no 3;4 0.020406 41.798 By MS/MS By MS/MS 2 1 95404000 85076000 10327000 4371 1006 4878 10939;10940;10941 10034;10035 10035 1846 2 QGSFTIEKPSPNIPIELIPHINKQTSSTPSSLALTSASR ESSKSLVRQGSFTIEK LALTSASRIRERSESL R Q G S R I 2 1 2 0 0 2 2 1 1 5 3 2 0 1 5 8 4 0 0 0 0 0 39 2 4146.1961 H0Y2V6;Q5SW79 H0Y2V6 800 838 CEP170 Centrosomal protein of 170 kDa yes no 4 0.001984 42.47 By MS/MS By matching 1 1 37381000 36396000 985110 4372 1006 4879 10942;10943 10036 10036 1846 1 QGSGRESPSLASR EKHSAVQRQGSGRESP ESPSLASREGKYIPLP R Q G S R E 1 2 0 0 0 1 1 2 0 0 1 0 0 0 1 4 0 0 0 0 0 0 13 1 1330.6589 Q8WWM7;H3BUF6;H3BSK9 Q8WWM7 333 345 ATXN2L Ataxin-2-like protein yes no 2;3 0.0075707 70.728 By MS/MS By MS/MS 4 3 106340000 59010000 47325000 4373 2409 4880 10944;10945;10946;10947;10948;10949;10950 10037;10038;10039;10040;10041 10038 4826;4827;4828 5 QGSGSSQPMEVQEGYGFGSGDDPYSSAEPHVSGVKR RAPGPLSKQGSGSSQP PHVSGVKRSRSGEGEV K Q G K R S 1 1 0 2 0 3 3 7 1 0 0 1 1 1 3 7 0 0 2 3 0 0 36 1 3712.6336 Q13263 Q13263 435 470 TRIM28 Transcription intermediary factor 1-beta yes yes 4 9.0676E-09 71.501 By MS/MS By MS/MS 3 2 49126000 33137000 15988000 4374 1908 4881;4882 10951;10952;10953;10954;10955 10042;10043;10044;10045 10042 250 3651;3652;3653 4 QGSPDQVSPVSEMTSTSLYQDKQEGK PFEEKSGKQGSPDQVS YQDKQEGKSTDFAPIK K Q G G K S 0 0 0 2 0 4 2 2 0 0 1 2 1 0 2 5 2 0 1 2 0 0 26 1 2825.3025 P46821 P46821 1436 1461 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 6.3694E-34 125.37 By matching By MS/MS 1 2 25418000 12197000 13220000 4375 1712 4883 10956;10957;10958 10046;10047 10047 3177 2 QGSPVAAGAPAK FGSRGQPRQGSPVAAG VAAGAPAKQQQVDIPL R Q G A K Q 4 0 0 0 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 12 0 1052.5615 Q9NZI8 Q9NZI8 179 190 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 3.8701E-20 171.62 By MS/MS By MS/MS 2 2 535440000 292720000 242720000 4376 2767 4884;4885 10959;10960;10961;10962 10048;10049;10050;10051;10052;10053;10054;10055 10050 5680 7 QGSPVAAGAPAKQQQVDIPLR FGSRGQPRQGSPVAAG QQVDIPLRLLVPTQYV R Q G L R L 4 1 0 1 0 4 0 2 0 1 1 1 0 0 3 1 0 0 0 2 0 0 21 1 2130.1546 Q9NZI8 Q9NZI8 179 199 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2;3;4 1.3507E-13 111.99 By MS/MS By MS/MS 5 5 1719400000 985070000 734350000 4377 2767 4886;4887 10963;10964;10965;10966;10967;10968;10969;10970;10971;10972 10056;10057;10058;10059;10060;10061;10062;10063;10064 10060 5680 9 QGSSLNLFEDVQITEPEAEPESK DTAAVVSRQGSSLNLF PEAEPESKSEPRPPIS R Q G S K S 1 0 1 1 0 2 5 1 0 1 2 1 0 1 2 3 1 0 0 1 0 0 23 0 2546.2024 Q6WKZ4;E7EX40 Q6WKZ4 498 520 RAB11FIP1 Rab11 family-interacting protein 1 no no 2;3 0.00066548 60.541 By MS/MS 2 14616000 14616000 0 4378 2175;752 4888 10973;10974 10065;10066;10067 10065 1372;1373 3 QGTDAVRTLSNAEDYLDDEDSD CASLLKKKQGTDAVRT YLDDEDSD________ K Q G S D - 2 1 1 6 0 1 2 1 0 0 2 0 0 0 0 2 2 0 1 1 0 0 22 1 2428.015 Q92882 Q92882 193 214 OSTF1 Osteoclast-stimulating factor 1 yes yes 2 4.5306E-05 103.26 By MS/MS 1 0 0 0 4379 2443 4889 10975 10068 10068 4918;4919;7828 1 QGVYENFR SSTGDAARQGVYENFR QGVYENFRRELEMSTT R Q G F R R 0 1 1 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 8 0 1011.4774 Q13009 Q13009 381 388 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 yes yes 2 0.0027968 116.9 By MS/MS By MS/MS 1 1 5687900 3179300 2508700 4380 1890 4890 10976;10977 10069;10070 10069 7682 2 QHEAPSNRPLNELLTPQGPSPR QDLSGGSRQHEAPSNR TPQGPSPRTQHCDPEH R Q H P R T 1 2 2 0 0 2 2 1 1 0 3 0 0 0 5 2 1 0 0 0 0 0 22 1 2437.2462 P10398;Q96II5 P10398 167 188 ARAF Serine/threonine-protein kinase A-Raf yes no 3 0.0014976 58.29 By MS/MS By MS/MS 2 2 47483000 23886000 23597000 4381 1555 4891;4892 10978;10979;10980;10981 10071;10072;10073 10071 2856;6665 3 QHYLSSEDEPDDNPDVLDSR HMPKRKRKQHYLSSED NPDVLDSRIETAQRQC K Q H S R I 0 1 1 5 0 1 2 0 1 0 2 0 0 0 2 3 0 0 1 1 0 0 20 0 2329.9935 Q8NFC6 Q8NFC6 2775 2794 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.020297 42.172 By MS/MS 1 7062200 0 7062200 4382 2353 4893 10982 10074 10074 4714;4715;7807 1 QHYQKETESAPGSPR NCPEFVPRQHYQKETE ESAPGSPRAVTPVPTK R Q H P R A 1 1 0 0 0 2 2 1 1 0 0 1 0 0 2 2 1 0 1 0 0 0 15 1 1713.8071 Q6PKG0;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 509 523 LARP1 La-related protein 1 yes no 3 0.00099158 75.608 By MS/MS By MS/MS 1 1 27561000 13697000 13864000 4383 2162 4894 10983;10984 10075;10076 10076 4313 2 QIANSQDGYVWQVTDMNR QMQPLNEKQIANSQDG WQVTDMNRLHRFLCFG K Q I N R L 1 1 2 2 0 3 0 1 0 1 0 0 1 0 0 1 1 1 1 2 0 0 18 0 2123.9695 D6RDN1;D6RE09;P10155 D6RDN1 15 32 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 2 4.9952E-06 100.55 By MS/MS 1 2989400 2989400 0 4384 670 4895 10985 10077 10077 1197 1 QIAQEIVKGMGYLHAK VLDVNKTRQIAQEIVK GMGYLHAKGILHKDLK R Q I A K G 2 0 0 0 0 2 1 2 1 2 1 2 1 0 0 0 0 0 1 1 0 0 16 1 1784.9607 E9PB13;Q6VAB6 E9PB13 736 751 KSR2 Kinase suppressor of Ras 2 yes no 3 0.013453 44.436 By MS/MS 1 1551300 1551300 0 4385 756 4896 10986 10078 10078 7375 1 QICLVMLETLSQSPQGR QSVTECVKQICLVMLE LSQSPQGRVMTIPYQP K Q I G R V 0 1 0 0 1 3 1 1 0 1 3 0 1 0 1 2 1 0 0 1 0 0 17 0 1958.9918 Q15365 Q15365 161 177 PCBP1 Poly(rC)-binding protein 1 yes yes 2;3 1.4651E-121 218.66 By MS/MS By MS/MS 4 3 83523000 69278000 14245000 4386 1984 4897;4898 10987;10988;10989;10990;10991;10992;10993 10079;10080;10081;10082;10083;10084;10085;10086 10083 267 3870;6832 8 QICVVMLETLSQSPPK QSIIECVKQICVVMLE TLSQSPPKGVTIPYRP K Q I P K G 0 0 0 0 1 2 1 0 0 1 2 1 1 0 2 2 1 0 0 2 0 0 16 0 1828.9427 Q15366;H3BRU6;F8VZX2 Q15366 161 176 PCBP2 Poly(rC)-binding protein 2 yes no 2;3 6.919E-16 136.61 By MS/MS By MS/MS 2 2 32451000 23662000 8788800 4387 1985 4899 10994;10995;10996;10997 10087;10088;10089;10090 10088 3879 4 QIDSSPVGGETDETTVSQNYR EASGSFFKQIDSSPVG TTVSQNYRGSVSQPST K Q I Y R G 0 1 1 2 0 2 2 2 0 1 0 0 0 0 1 3 3 0 1 2 0 0 21 0 2282.0299 F1T0I1;J3KNL6;O15027 F1T0I1 565 585 SEC16A Protein transport protein Sec16A yes no 2;3 0.0024212 64.26 By MS/MS By MS/MS 2 2 68120000 42864000 25257000 4388 846 4900 10998;10999;11000;11001 10091;10092;10093;10094 10092 1526;1527;6455 4 QILIACSPVSSVR ILRVTRRRQILIACSP CSPVSSVRKKPKVTPT R Q I V R K 1 1 0 0 1 1 0 0 0 2 1 0 0 0 1 3 0 0 0 2 0 0 13 0 1428.7759 J3KP30;Q5QJE6;E9PRB3 J3KP30 111 123 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 1.5001E-10 132.24 By MS/MS By MS/MS 2 2 136440000 79726000 56715000 4389 1229 4901 11002;11003;11004;11005 10095;10096;10097;10098 10095 2223 4 QILLGPNTGLSGGMPGALPSLPGKI QQQQLQQRQILLGPNT LPSLPGKI________ R Q I K I - 1 0 1 0 0 1 0 6 0 2 5 1 1 0 4 2 1 0 0 0 0 0 25 1 2387.3247 Q9NS69 Q9NS69 118 142 TOMM22 Mitochondrial import receptor subunit TOM22 homolog yes yes 3 0.0023747 49.613 By MS/MS 1 3127900 3127900 0 4390 2726 4902 11006 10099 10099 358 1 QIQKNCPPSPLPLISK PSPISTNRQIQKNCPP SPLPLISKQSPQTSFP R Q I S K Q 0 0 1 0 1 2 0 0 0 2 2 2 0 0 4 2 0 0 0 0 0 0 16 1 1819.0026 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 475 490 MAP7D3 MAP7 domain-containing protein 3 yes no 3 0.0095112 53.768 By matching By MS/MS 1 1 9402200 4350200 5052000 4391 195 4903 11007;11008 10100 10100 352 1 QIQTSPVPVR DKGGKDKKQIQTSPVP QTSPVPVRKNSRDEEK K Q I V R K 0 1 0 0 0 2 0 0 0 1 0 0 0 0 2 1 1 0 0 2 0 0 10 0 1123.635 Q9NRM7 Q9NRM7 572 581 LATS2 Serine/threonine-protein kinase LATS2 yes yes 2 0.00016821 113.67 By MS/MS By MS/MS 1 1 5961100 3101700 2859400 4392 2722 4904 11009;11010 10101;10102 10102 5562 2 QISLAPETLDSSGDVSPGPR EAWDLDVKQISLAPET GDVSPGPRNSPSLQPP K Q I P R N 1 1 0 2 0 1 1 2 0 1 2 0 0 0 3 4 1 0 0 1 0 0 20 0 2025.0015 Q8TER5 Q8TER5 1459 1478 ARHGEF40 Rho guanine nucleotide exchange factor 40 yes yes 2 0.0037235 63.488 By MS/MS By matching 1 1 6914000 4236900 2677000 4393 2391 4905 11011;11012 10103 10103 4780 1 QISLPDLSQEEPQLK FFEKAPSRQISLPDLS SQEEPQLKTPALANEE R Q I L K T 0 0 0 1 0 3 2 0 0 1 3 1 0 0 2 2 0 0 0 0 0 0 15 0 1723.8992 H0YBZ4;Q15390 H0YBZ4 75 89 MTFR1 Mitochondrial fission regulator 1 yes no 2;3 1.6668E-23 152.11 By MS/MS By MS/MS 2 1 25878000 14222000 11657000 4394 1057 4906 11013;11014;11015 10104;10105;10106 10106 1963 3 QISQDFSELSTQLTGVAR PPLPTDMRQISQDFSE TQLTGVARDLQEEMLP R Q I A R D 1 1 0 1 0 3 1 1 0 1 2 0 0 1 0 3 2 0 0 1 0 0 18 0 1978.996 A0A0A0MSQ9;X6R3V9;Q86VX9 A0A0A0MSQ9 97 114 MON1A Vacuolar fusion protein MON1 homolog A yes no 2;3 2.5863E-13 124.45 By MS/MS By MS/MS 2 2 45782000 25661000 20121000 4395 223 4907 11016;11017;11018;11019 10107;10108;10109 10107 406 3 QISQDVK ERRQRLERQISQDVKL RQISQDVKLEPDILLR R Q I V K L 0 0 0 1 0 2 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 7 0 816.43413 E9PJF6;H0YCL9;H0Y360;Q01433;E9PIJ1 E9PJF6 85 91 AMPD2 AMP deaminase 2 yes no 2 0.013946 95.775 By MS/MS By MS/MS 2 3 16244000 7310800 8932800 4396 810 4908 11020;11021;11022;11023;11024 10110;10111;10112 10111 1453 3 QISQDVKLEPDILLR ERRQRLERQISQDVKL LEPDILLRAKQD____ R Q I L R A 0 1 0 2 0 2 1 0 0 2 3 1 0 0 1 1 0 0 0 1 0 0 15 1 1765.9938 E9PJF6;H0YCL9;H0Y360;Q01433;E9PIJ1 E9PJF6 85 99 AMPD2 AMP deaminase 2 yes no 2;3 8.6663E-84 204.17 By MS/MS By MS/MS 2 2 302240000 201140000 101090000 4397 810 4909 11025;11026;11027;11028 10113;10114;10115;10116 10114 1453 4 QISQDVKLEPDILLRAK ERRQRLERQISQDVKL PDILLRAKQD______ R Q I A K Q 1 1 0 2 0 2 1 0 0 2 3 2 0 0 1 1 0 0 0 1 0 0 17 2 1965.1259 E9PJF6;H0YCL9;H0Y360;Q01433;E9PIJ1 E9PJF6 85 101 AMPD2 AMP deaminase 2 yes no 3 0.0011064 72.568 By MS/MS 1 3741200 3741200 0 4398 810 4910 11029 10117 10117 1453 1 QITTSPITVR DSGDKEKKQITTSPIT TTSPITVRKNKKDEER K Q I V R K 0 1 0 0 0 1 0 0 0 2 0 0 0 0 1 1 3 0 0 1 0 0 10 0 1114.6346 O95835 O95835 609 618 LATS1 Serine/threonine-protein kinase LATS1 yes yes 2 2.6185E-06 152.67 By MS/MS By MS/MS 1 1 57218000 29189000 28028000 4399 1504 4911 11030;11031 10118;10119 10119 2790 2 QITVNDLPVGR IDDKGILRQITVNDLP VNDLPVGRSVDETLRL R Q I G R S 0 1 1 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1210.667 P32119;A0A0A0MRQ5;A0A0A0MSI0;Q06830 A0A0A0MSI0 141 151 PRDX2;PRDX1 Peroxiredoxin-2;Peroxiredoxin-1 no no 2 1.3766E-05 135.71 By matching By MS/MS 1 1 24761000 14091000 10670000 4400 214;1664 4912 11032;11033 10120 10120 1 QIVGTPVNSEDSDTR KIVPGNEKQIVGTPVN NSEDSDTRQTSHLQAR K Q I T R Q 0 1 1 2 0 1 1 1 0 1 0 0 0 0 1 2 2 0 0 2 0 0 15 0 1616.7642 J3KP30;Q5QJE6 J3KP30 228 242 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 1.0685E-09 128.71 By MS/MS By MS/MS 1 1 20920000 11062000 9857900 4401 1229 4913 11034;11035 10121;10122 10122 6560 2 QIYLSENPEETAAR CTINNISKQIYLSENP NPEETAARVNQSALEA K Q I A R V 2 1 1 0 0 1 3 0 0 1 1 0 0 0 1 1 1 0 1 0 0 0 14 0 1619.7791 Q9UKG1 Q9UKG1 376 389 APPL1 DCC-interacting protein 13-alpha yes yes 2 0.00046476 96.604 By MS/MS By MS/MS 1 1 11579000 6401800 5177200 4402 2829 4914 11036;11037 10123;10124 10124 7935 2 QKASEYESEGMSRK YLVIEDLKQKASEYES ESEGMSRKQSCICLQK K Q K R K Q 1 1 0 0 0 1 3 1 0 0 0 2 1 0 0 3 0 0 1 0 0 0 14 2 1628.7464 K7EM54 K7EM54 60 73 HAUS1 yes yes 3 0.024691 44.539 By MS/MS 1 0 0 0 4403 1282 4915 11038 10125 10125 7485 1 QKEDVEVVGGSDGEGAIGLSSDPK KDLETRKKQKEDVEVV IGLSSDPKSREQMIND K Q K P K S 1 0 0 3 0 1 3 5 0 1 1 2 0 0 1 3 0 0 0 3 0 0 24 1 2372.1343 Q8NHZ8 Q8NHZ8 32 55 CDC26 Anaphase-promoting complex subunit CDC26 yes yes 3 0.014442 44.385 By matching By MS/MS 1 1 29696000 16215000 13481000 4404 2363 4916 11039;11040 10126 10126 4738 1 QKFNDSEGDDTEETEDYR FSDKESGKQKFNDSEG TEETEDYRQFRKSVLA K Q K Y R Q 0 1 1 4 0 1 4 1 0 0 0 1 0 1 0 1 2 0 1 0 0 0 18 1 2176.8669 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 392 409 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 1.7704E-13 122.3 By MS/MS By MS/MS 2 2 348170000 179850000 168320000 4405 2759 4917 11041;11042;11043;11044 10127;10128;10129 10129 5646 3 QKGYSDEIYVVPDDSQNR EPIDTIFKQKGYSDEI VPDDSQNRIKIRNSFV K Q K N R I 0 1 1 3 0 2 1 1 0 1 0 1 0 0 1 2 0 0 2 2 0 0 18 1 2111.976 Q13017;A0A0A0MSK6 Q13017 1101 1118 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 0.00068187 70.96 By MS/MS By MS/MS 1 1 5192500 2230200 2962200 4406 1891 4918 11045;11046 10130;10131;10132;10133 10130 7683 4 QKKAHLMEIQVNGGTVAEK QMRLLPLRQKKAHLME NGGTVAEKLDWARERL R Q K E K L 2 0 1 0 0 2 2 2 1 1 1 3 1 0 0 0 1 0 0 2 0 0 19 2 2080.1099 H7C422;H7C3M2;B5MCW2;G5E9G0;P39023 H7C422 202 220 RPL3 60S ribosomal protein L3 yes no 2;3 0.021844 50.831 By matching By MS/MS 1 2 4662600 2939700 1722900 4407 1185 4919 11047;11048;11049 10134;10135 10134 1 QKLSRMEPVELDTPGHLCPDSPESSR SGPPSGLRQKLSRMEP PDSPESSRLSLERRRY R Q K S R L 0 2 0 2 1 1 3 1 1 0 3 1 1 0 4 4 1 0 0 1 0 0 26 2 2964.407 Q69YU3 Q69YU3 331 356 ANKRD34A Ankyrin repeat domain-containing protein 34A yes yes 3 0.010154 42.041 By matching By MS/MS 1 1 5806200 3673200 2132900 4408 2138 4920 11050;11051 10136 10136 288 4253;6897 1 QKSDAEEDGGTVSQEEEDR GEEKLEEKQKSDAEED VSQEEEDRKPKAEEDE K Q K D R K 1 1 0 3 0 2 5 2 0 0 0 1 0 0 0 2 1 0 0 1 0 0 19 1 2107.8778 P27824 P27824 552 570 CANX Calnexin yes yes 3 0.0020682 63.578 By MS/MS By MS/MS 1 2 30113000 12082000 18031000 4409 1638 4921 11052;11053;11054 10137;10138 10138 3026;3027 2 QKSEEPSVSIPFLQTALLR VPHGKLLKQKSEEPSV FLQTALLRSSGSLGHR K Q K L R S 1 1 0 0 0 2 2 0 0 1 3 1 0 1 2 3 1 0 0 1 0 0 19 1 2142.1685 H0Y2V6;Q5SW79;H0YB66 H0Y2V6 408 426 CEP170 Centrosomal protein of 170 kDa yes no 2 0.008373 59.502 By MS/MS 1 8282400 8282400 0 4410 1006 4922 11055 10139 10139 1841;1842 1 QKSLTLTPTR KKDINRERQKSLTLTP SLTLTPTRSDSSEGFL R Q K T R S 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 1 3 0 0 0 0 0 10 1 1143.6612 Q3V6T2;H0Y7K3;H0Y470;H7C2C6;H0Y7U8 Q3V6T2 1415 1424 CCDC88A Girdin yes no 2 0.015614 69.261 By matching By MS/MS 1 1 8205500 4077900 4127600 4411 2040 4923 11056;11057 10140 10140 3995 1 QKSPEIHR ATEEHSTRQKSPEIHR QKSPEIHRRIDISPST R Q K H R R 0 1 0 0 0 1 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 0 8 1 993.53558 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 646 653 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 0.0056195 84.817 By MS/MS By MS/MS 2 2 802360000 396890000 405470000 4412 2759 4924 11058;11059;11060;11061 10141;10142;10143;10144;10145;10146;10147;10148;10149 10144 5651 9 QKSYTLVVAK FIPPWLKKQKSYTLVV SYTLVVAKDGGDKKEP K Q K A K D 1 0 0 0 0 1 0 0 0 0 1 2 0 0 0 1 1 0 1 2 0 0 10 1 1135.6601 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 85 94 EPB41L2 Band 4.1-like protein 2 yes no 2;3 4.3509E-05 137.01 By MS/MS By MS/MS 2 2 150450000 81973000 68481000 4413 1387 4925 11062;11063;11064;11065 10150;10151;10152;10153 10152 2543;6617;7521 4 QKYFELEVR EQLSFRERQKYFELEV KYFELEVRVPQAEGPP R Q K V R V 0 1 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 0 1 1 0 0 9 1 1210.6346 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1277 1285 SCRIB Protein scribble homolog yes no 2;3 0.00067529 122.94 By MS/MS By matching 2 1 13655000 12304000 1350800 4414 322 4926 11066;11067;11068 10154;10155 10155 7240 2 QLAVIPPMLYDADQQR ENLEKQMRQLAVIPPM LYDADQQRIKFINMNG R Q L Q R I 2 1 0 2 0 3 0 0 0 1 2 0 1 0 2 0 0 0 1 1 0 0 16 0 1856.9455 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9JQE8;C9J330 C9JE98 390 405 NCOR2 Nuclear receptor corepressor 2 yes no 3 0.031386 44.44 By MS/MS 1 1990500 0 1990500 4415 552 4927 11069 10156 10156 0 QLECNQQKVVTVHYSLNSEAYEDDSNVK LKIVPEPKQLECNQQK YEDDSNVKFFYLNGNF K Q L V K F 1 0 3 2 1 3 3 0 1 0 2 2 0 0 0 3 1 0 2 4 0 0 28 1 3296.5255 Q6IE37 Q6IE37 418 445 OVOS1 Ovostatin homolog 1 yes yes 3 0.0097821 40.669 By MS/MS 1 5260300 0 5260300 4416 2143 4928 11070 10157 10157 4259;6899 1 QLEEPGAGTPSPVR SGSGMPSRQLEEPGAG AGTPSPVRLHALAGFQ R Q L V R L 1 1 0 0 0 1 2 2 0 0 1 0 0 0 3 1 1 0 0 1 0 0 14 0 1436.726 Q63ZY6;Q96P11 Q63ZY6 133 146 NSUN5P2;NSUN5 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 2 2.8688E-16 149.6 By MS/MS By matching 1 1 16776000 7684200 9091400 4417 2128 4929 11071;11072 10158 10158 4234 1 QLESGGFEAR SGASRLRRQLESGGFE ESGGFEARLYVKQLSQ R Q L A R L 1 1 0 0 0 1 2 2 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1092.52 Q8IYI6 Q8IYI6 16 25 EXOC8 Exocyst complex component 8 yes yes 2 0.0027076 85.973 By MS/MS By matching 1 1 3543100 1641500 1901600 4418 2289 4930 11073;11074 10159 10159 4593 1 QLEYQQLEDDKLSQK EFAARAAKQLEYQQLE EDDKLSQKSSSSKLSR K Q L Q K S 0 0 0 2 0 4 2 0 0 0 3 2 0 0 0 1 0 0 1 0 0 0 15 1 1863.9214 A0A0A0MRA8;A0A0A0MSA4;J3KS70;J3QKY2;J3KRD1;J3QKK4;J3QR33;J3QS55;Q9Y2J2 A0A0A0MRA8 76 90 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 2 0.019133 60.657 By MS/MS By matching 1 1 11549000 6931800 4617000 4419 175;2891 4931 11075;11076 10160 10160 310 0 QLFHPEQLITGK EVRTGTYRQLFHPEQL PEQLITGKEDAANNYA R Q L G K E 0 0 0 0 0 2 1 1 1 1 2 1 0 1 1 0 1 0 0 0 0 0 12 0 1409.7667 P68363;F5H5D3;Q9BQE3;Q71U36;Q6PEY2;Q13748;F8VQQ4;F8VVB9;P68366;F8VX09;F8VWV9;F8VRZ4;F8VS66;C9J2C0;Q9NY65;C9K0S6;C9JDL2;C9JEV8;C9JQ00;C9JJQ8 P68363 85 96 TUBA1B;TUBA1C;TUBA1A;TUBA3E;TUBA3C;TUBA4A;TUBA8 Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain;Tubulin alpha-4A chain;Tubulin alpha-8 chain yes no 3 0.0020372 80.245 By MS/MS By MS/MS 1 1 0 0 0 4420 1810 4932 11077;11078 10161;10162 10161 2 QLHLEGASLELSDDDTESK SSSRSGRRQLHLEGAS SDDDTESKTSDVNETQ R Q L S K T 1 0 0 3 0 1 3 1 1 0 4 1 0 0 0 3 1 0 0 0 0 0 19 0 2085.9702 P35580 P35580 1945 1963 MYH10 Myosin-10 yes yes 3 0.00069385 71.143 By MS/MS By MS/MS 2 2 48792000 27946000 20846000 4421 1671 4933;4934 11079;11080;11081;11082 10163;10164;10165;10166 10163 3078;3079;3080 4 QLIVGVNK LAYTLGVKQLIVGVNK QLIVGVNKMDSTEPPY K Q L N K M 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 869.53345 P68104;Q5VTE0;A0A087WV01;Q05639 P68104 147 154 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha;Elongation factor 1-alpha 2 yes no 2 0.023382 82.305 By MS/MS By MS/MS 1 1 18180000 8748500 9431300 4422 1809 4935 11083;11084 10167;10168 10167 2 QLKLSITK NFEVGSSRQLKLSITK QLKLSITKKSSPSVKP R Q L T K K 0 0 0 0 0 1 0 0 0 1 2 2 0 0 0 1 1 0 0 0 0 0 8 1 929.59097 H3BV90;Q6FI81;H3BPG7;H3BT65;H3BUG4 H3BV90 173 180 CIAPIN1 Anamorsin yes no 2 0.011351 92.239 By matching By MS/MS 1 1 19161000 10195000 8965900 4423 1146 4936 11085;11086 10169 10169 2091 1 QLKLSITKK NFEVGSSRQLKLSITK LKLSITKKSSPSVKPA R Q L K K S 0 0 0 0 0 1 0 0 0 1 2 3 0 0 0 1 1 0 0 0 0 0 9 2 1057.6859 H3BV90;Q6FI81;H3BPG7;H3BT65;H3BUG4 H3BV90 173 181 CIAPIN1 Anamorsin yes no 3 0.015897 64.224 By MS/MS By matching 1 1 6693400 4366000 2327400 4424 1146 4937 11087;11088 10170 10170 2091 1 QLLDSDEEQEEDEGR LKAAPKKRQLLDSDEE EQEEDEGRNRAPELGA R Q L G R N 0 1 0 3 0 2 5 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 15 0 1790.7442 Q9UNS1 Q9UNS1 1169 1183 TIMELESS Protein timeless homolog yes yes 2 0.00019764 107.07 By MS/MS By MS/MS 1 1 121610000 68787000 52823000 4425 2863 4938 11089;11090 10171;10172 10172 5902 2 QLLLQQQQQQQVSGLKSPK QQALQVARQLLLQQQQ VSGLKSPKRNDKQPAL R Q L P K R 0 0 0 0 0 8 0 1 0 0 4 2 0 0 1 2 0 0 0 1 0 0 19 1 2178.2121 G5E965;H0Y882;C9J0F0;E9PFD3;A0A087X299;Q9H334;A0A087WVT2 G5E965 67 85 FOXP1 Forkhead box protein P1 yes no 3 0.026899 42.149 By MS/MS By matching 1 1 25949000 14399000 11550000 4426 147 4939 11091;11092 10173 10173 1 QLLLQQQTSGLKSPK QQALQAARQLLLQQQT TSGLKSPKSSDKQRPL R Q L P K S 0 0 0 0 0 4 0 1 0 0 4 2 0 0 1 2 1 0 0 0 0 0 15 1 1667.957 A0A0U1RQE0;A8MUV4;A0A0U1RQR8;A0A0U1RQY3;A0A0U1RQM2;O15409;C9JQP8;Q8N6B5 A0A0U1RQE0 63 77 FOXP2 Forkhead box protein P2 yes no 2;3 0.00017341 92.427 By MS/MS By MS/MS 2 1 15064000 11599000 3465000 4427 335 4940 11093;11094;11095 10174;10175;10176 10174 627 2 QLLLTADDR EENRRFYRQLLLTADD LLLTADDRVNPCIGGV R Q L D R V 1 1 0 2 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1043.5611 J3KPS3;P04075;H3BQN4;H3BUH7;H3BR04;H3BPS8;H3BMQ8;H3BU78 J3KPS3 61 69 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0062902 96.948 By MS/MS By MS/MS 1 1 6809500 3061000 3748500 4428 1232 4941 11096;11097 10177;10178 10177 2 QLLTLSSELSQAR EKNERVQRQLLTLSSE SSELSQARDENKRTHN R Q L A R D 1 1 0 0 0 2 1 0 0 0 4 0 0 0 0 3 1 0 0 0 0 0 13 0 1444.7886 E7EQR4;P15311 E7EQR4 530 542 EZR Ezrin yes no 2 8.0276E-39 188.13 By MS/MS By MS/MS 1 1 13082000 8004100 5078000 4429 723 4942 11098;11099 10179;10180 10179 1287 2 QLMEQDASSSPSAQVIGLK SAEREKLKQLMEQDAS SAQVIGLKNALSSALA K Q L L K N 2 0 0 1 0 3 1 1 0 1 2 1 1 0 1 4 0 0 0 1 0 0 19 0 1987.9885 Q9H4L5 Q9H4L5 363 381 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 2 2.3107E-06 99.011 By matching By MS/MS 1 1 7529200 3725600 3803600 4430 2661 4943 11100;11101 10181;10182 10182 5424 2 QLPSPEPCEIQK RGIIVDARQLPSPEPC PEPCEIQKNLNDNEML R Q L Q K N 0 0 0 0 1 2 2 0 0 1 1 1 0 0 3 1 0 0 0 0 0 0 12 0 1424.697 Q5VVJ2 Q5VVJ2 337 348 MYSM1 Histone H2A deubiquitinase MYSM1 yes yes 2 0.0010367 102.06 By MS/MS By MS/MS 1 1 21255000 11260000 9995400 4431 2118 4944 11102;11103 10183;10184 10184 4201 2 QLQAETEPIVK TTVVAQLKQLQAETEP AETEPIVKMFEDPETT K Q L V K M 1 0 0 0 0 2 2 0 0 1 1 1 0 0 1 0 1 0 0 1 0 0 11 0 1254.682 P60228;E5RIT4;H0YBR5 P60228 83 93 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 2 0.017083 66.568 By MS/MS 1 1124600 1124600 0 4432 1782 4945 11104 10185 10185 0 QLQALSSELAQAR QKNERVKKQLQALSSE SSELAQARDETKKTQN K Q L A R D 3 1 0 0 0 3 1 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 13 0 1413.7576 P35241 P35241 527 539 RDX Radixin yes yes 2 1.8086E-15 157.2 By MS/MS By MS/MS 1 1 9066600 4967000 4099600 4433 1668 4946 11105;11106 10186;10187 10186 3069 2 QLSEEQPSGNGVK AENKPRKRQLSEEQPS QPSGNGVKKPKIEIPV R Q L V K K 0 0 1 0 0 2 2 2 0 0 1 1 0 0 1 2 0 0 0 1 0 0 13 0 1371.663 Q9H4Z3 Q9H4Z3 114 126 PCIF1 Phosphorylated CTD-interacting factor 1 yes yes 2 0.0020213 90.05 By MS/MS By MS/MS 2 2 22122000 10739000 11383000 4434 2663 4947;4948 11107;11108;11109;11110 10188;10189;10190;10191 10191 5429 3 QLSESESSLEMDDER ERREALCRQLSESESS SLEMDDERYFNEMSAQ R Q L E R Y 0 1 0 2 0 1 4 0 0 0 2 0 1 0 0 4 0 0 0 0 0 0 15 0 1753.7312 Q16204 Q16204 321 335 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 2.7844E-09 122.39 By MS/MS By MS/MS 2 2 50080000 27486000 22593000 4435 2014 4949;4950 11111;11112;11113;11114 10192;10193;10194;10195 10194 271 3926;3927 4 QLSESFK SSSKSSSRQLSESFKS RQLSESFKSKEFVSSD R Q L F K S 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 7 0 837.42323 Q08945 Q08945 655 661 SSRP1 FACT complex subunit SSRP1 yes yes 2 0.022151 85.67 By MS/MS By MS/MS 1 1 7849800 4203500 3646400 4436 1866 4951 11115;11116 10196;10197 10196 2 QLSFISPPTPQPK RQIEERKKQLSFISPP SPPTPQPKTPSSSQPE K Q L P K T 0 0 0 0 0 2 0 0 0 1 1 1 0 1 4 2 1 0 0 0 0 0 13 0 1438.782 O43395 O43395 159 171 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 2 0.014405 108.71 By MS/MS 1 0 0 0 4437 1382 4952 11117 10198 10198 1 QLSLEGSGLGVEDLK STKYDVFRQLSLEGSG GLGVEDLKDNTPSGKS R Q L L K D 0 0 0 1 0 1 2 3 0 0 4 1 0 0 0 2 0 0 0 1 0 0 15 0 1543.8094 Q9UMZ2 Q9UMZ2 750 764 SYNRG Synergin gamma yes yes 2 1.1422E-55 186.69 By MS/MS By MS/MS 1 1 14601000 6649300 7951500 4438 2859 4953 11118;11119 10199;10200 10199 5891 2 QLSLEGSGLGVEDLKDNTPSGK STKYDVFRQLSLEGSG KDNTPSGKSDDDFADF R Q L G K S 0 0 1 2 0 1 2 4 0 0 4 2 0 0 1 3 1 0 0 1 0 0 22 1 2243.1281 Q9UMZ2 Q9UMZ2 750 771 SYNRG Synergin gamma yes yes 3 4.5185E-11 107.18 By MS/MS By MS/MS 1 1 21649000 10712000 10936000 4439 2859 4954 11120;11121 10201;10202 10201 5891 2 QLSLRINELPSTMQR QKMSPFKRQLSLRINE ELPSTMQRKTDFPIKN R Q L Q R K 0 2 1 0 0 2 1 0 0 1 3 0 1 0 1 2 1 0 0 0 0 0 15 1 1784.9567 G3V3Z8;P49757 G3V3Z8 149 163 NUMB Protein numb homolog yes no 3 0.00015671 93.768 By MS/MS By MS/MS 1 1 7764500 4198000 3566400 4440 972 4955 11122;11123 10203;10204 10204 1771 2 QLSLRLNELPSTLQR QKNSPFKRQLSLRLNE ELPSTLQRRTDFQVKG R Q L Q R R 0 2 1 0 0 2 1 0 0 0 5 0 0 0 1 2 1 0 0 0 0 0 15 1 1767.0003 A0A0C4DGH3;Q9Y6R0 A0A0C4DGH3 281 295 NUMBL Numb-like protein yes no 3 0.001553 67.153 By MS/MS By MS/MS 1 1 11069000 7190600 3878200 4441 293 4956 11124;11125 10205;10206 10205 523 2 QLSMSSADSADAKR SWDPRRQRQLSMSSAD ADSADAKRTREEGKDW R Q L K R T 3 1 0 2 0 1 0 0 0 0 1 1 1 0 0 4 0 0 0 0 0 0 14 1 1465.6831 Q5JSZ5 Q5JSZ5 414 427 PRRC2B Protein PRRC2B yes yes 2;3 0.0017607 72.615 By MS/MS By MS/MS 2 2 30370000 15907000 14463000 4442 2074 4957 11126;11127;11128;11129 10207;10208;10209 10207 4084 3 QLSPTPGYPSQYQLYAMENTR AAAYLFQRQLSPTPGY LYAMENTRQTILNDYI R Q L T R Q 1 1 1 0 0 3 1 1 0 0 2 0 1 0 3 2 2 0 3 0 0 0 21 0 2443.1478 A0A088AWL3;O75376;E7EVK1 A0A088AWL3 1494 1514 NCOR1 Nuclear receptor corepressor 1 yes no 3 0.015078 45.659 By matching By MS/MS 1 1 8440900 4969500 3471400 4443 151 4958 11130;11131 10210 10210 269 1 QLSSRPMLGLRLSLSSLQK Q L Q K 0 2 0 0 0 2 0 1 0 0 6 1 1 0 1 5 0 0 0 0 0 0 19 2 2113.2041 REV__Q8IXR5 yes yes 3 0.016228 50.831 By MS/MS By MS/MS 1 3 65413000 20672000 44741000 + 4444 3004 4959;4960 11132;11133;11134;11135 10211;10212;10213 10212 6196;6197 2 QLSSSSSYSGDISR SAGKQLQRQLSSSSSY SYSGDISRHHNSTAEL R Q L S R H 0 1 0 1 0 1 0 1 0 1 1 0 0 0 0 7 0 0 1 0 0 0 14 0 1472.6743 A0A0A0MS99;I3L4X2;P33527 A0A0A0MS99 597 610 ABCC1 Multidrug resistance-associated protein 1 yes no 2 0.00057118 101.42 By MS/MS By MS/MS 1 1 14122000 6983400 7139000 4445 212 4961 11136;11137 10214;10215 10215 385;386;387 2 QLSSTSPLAPYPTSQMVSSDR EAHQGFSRQLSSTSPL SQMVSSDRSQLSFLPT R Q L D R S 1 1 0 1 0 2 0 0 0 0 2 0 1 0 3 6 2 0 1 1 0 0 21 0 2251.0791 Q6UUV7 Q6UUV7 408 428 CRTC3 CREB-regulated transcription coactivator 3 yes yes 3 0.0010214 63.69 By MS/MS By MS/MS 1 1 9284400 5420200 3864200 4446 2169 4962 11138;11139 10216;10217 10216 4331;4332;4333;6919 2 QLSTEQAVLQESLEKESK DKHMAISRQLSTEQAV ESLEKESKVNKRLSME R Q L S K V 1 0 0 0 0 3 4 0 0 0 3 2 0 0 0 3 1 0 0 1 0 0 18 1 2046.0481 Q9ULD2 Q9ULD2 1201 1218 MTUS1 Microtubule-associated tumor suppressor 1 yes yes 3 0.0043126 58.688 By MS/MS By matching 1 1 4040800 2163600 1877200 4447 2841 4963 11140;11141 10218 10218 7092 1 QLTQPETHFGR LRSPFLQKQLTQPETH QPETHFGREPAAAISR K Q L G R E 0 1 0 0 0 2 1 1 1 0 1 0 0 1 1 0 2 0 0 0 0 0 11 0 1312.6524 H0Y5J4;Q9UJU6;B4DDD6 H0Y5J4 218 228 DBNL Drebrin-like protein yes no 3 0.018389 62.166 By matching By MS/MS 1 1 4404500 2836700 1567800 4448 1027 4964 11142;11143 10219 10219 1 QLVAGNSPK QVGTKTYKQLVAGNSP LVAGNSPKKQASRPPI K Q L P K K 1 0 1 0 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 9 0 912.50288 Q96EU6 Q96EU6 67 75 RRP36 Ribosomal RNA processing protein 36 homolog yes yes 2 0.0017688 125.23 By MS/MS By MS/MS 2 1 14393000 10711000 3682600 4449 2479 4965 11144;11145;11146 10220;10221;10222 10222 4999 3 QLVRGEPNVSYICSR LCDFGSAKQLVRGEPN NVSYICSRYYRAPELI K Q L S R Y 0 2 1 0 1 1 1 1 0 1 1 0 0 0 1 2 0 0 1 2 0 0 15 1 1776.8941 P49840;A8MT37;P49841 P49841 269 283 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 3 0.00093596 72.615 By MS/MS By MS/MS 1 1 48676000 27915000 20762000 4450 1732;1733 4966 11147;11148 10223;10224;10225 10224 3280;7628 3 QLVTSPSPMSSSDGK PIPVQRTRQLVTSPSP PMSSSDGKVLPLNVQV R Q L G K V 0 0 0 1 0 1 0 1 0 0 1 1 1 0 2 5 1 0 0 1 0 0 15 0 1519.7188 H0YLX2;Q2KHR2 H0YLX2 278 292 RFX7 DNA-binding protein RFX7 yes no 2 0.00032614 94.454 By MS/MS By matching 1 1 3116300 2614700 501540 4451 1094 4967 11149;11150 10226 10226 2014 1 QLWDSPETAPAAR AGGHPDARQLWDSPET PETAPAARTPQSPAPC R Q L A R T 3 1 0 1 0 1 1 0 0 0 1 0 0 0 2 1 1 1 0 0 0 0 13 0 1440.6997 Q9Y613 Q9Y613 482 494 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.0023605 85.287 By MS/MS By matching 1 1 11951000 6532900 5417900 4452 2943 4968 11151;11152 10227 10227 6110 1 QLYVLGHEAMKR IDEGLYSRQLYVLGHE LGHEAMKRLQTSSVLV R Q L K R L 1 1 0 0 0 1 1 1 1 0 2 1 1 0 0 0 0 0 1 1 0 0 12 1 1443.7657 P22314;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3;Q5JRS2 P22314 58 69 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 3 0.012037 49.632 By MS/MS By matching 1 1 2687100 1415200 1271900 4453 1617 4969 11153;11154 10228 10228 7576 1 QMFDFQGLIPGYTPTTVDSPLQKR GKWPVNRRQMFDFQGL VDSPLQKRSFAELSMV R Q M K R S 0 1 0 2 0 3 0 2 0 1 2 1 1 2 3 1 3 0 1 1 0 0 24 1 2738.3738 Q9P2D1 Q9P2D1 2338 2361 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 3 0.0026253 51.777 By MS/MS 1 6248700 6248700 0 4454 2788 4970 11155 10229 10229 7080 1 QMMMKFNDILAQYCK RSREAVNRQMMMKFND DILAQYCKEIDIINKI R Q M C K E 1 0 1 1 1 2 0 0 0 1 1 2 3 1 0 0 0 0 1 0 0 0 15 1 1919.8766 A0A087WV07 A0A087WV07 404 418 DNAH10 yes yes 3 0.008795 48.277 By MS/MS 1 6441300 0 6441300 4455 54 4971 11156 10230 10230 6;7 1 QMMNLLTGGQK ________________ NLLTGGQKLCADCHVL - Q M Q K L 0 0 1 0 0 2 0 2 0 0 2 1 2 0 0 0 1 0 0 0 0 0 11 0 1219.6053 H7C422 H7C422 1 11 RPL3 yes yes 2 0.022988 45.764 By MS/MS 1 0 0 0 4456 1185 4972 11157 10231 10231 1 QMMSATAQNREPESVEQLESR HKYSLMKRQMMSATAQ SVEQLESRIVEQENAI R Q M S R I 2 2 1 0 0 3 4 0 0 0 1 0 2 0 1 3 1 0 0 1 0 0 21 1 2420.106 Q9Y5X2 Q9Y5X2 355 375 SNX8 Sorting nexin-8 yes yes 3 0.017402 51.554 By MS/MS 1 1509900 1509900 0 4457 2940 4973 11158 10232 10232 385 6106 0 QMMSPVSK PEYPFKTKQMMSPVSK QMMSPVSKTQEHGLFY K Q M S K T 0 0 0 0 0 1 0 0 0 0 0 1 2 0 1 2 0 0 0 1 0 0 8 0 906.43031 Q8IY63 Q8IY63 319 326 AMOTL1 Angiomotin-like protein 1 yes yes 2 0.0067951 99.788 By MS/MS By MS/MS 1 1 8948200 5100200 3848000 4458 2286 4974 11159;11160 10233;10234 10233 4586 2 QMPSESLDPAFSPR LQQAVLSRQMPSESLD LDPAFSPRMPSSGFAA R Q M P R M 1 1 0 1 0 1 1 0 0 0 1 0 1 1 3 3 0 0 0 0 0 0 14 0 1560.7242 Q15018 Q15018 269 282 FAM175B BRISC complex subunit Abro1 yes yes 2 0.0093421 63.631 By MS/MS 1 4429300 4429300 0 4459 1967 4975 11161 10235 10235 3836 1 QMQVSLTSK CRSVRTVKQMQVSLTS MQVSLTSKKHSRKSSS K Q M S K K 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 2 1 0 0 1 0 0 9 0 1020.5274 P55085 P55085 369 377 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 yes yes 2 0.0062964 82.171 By MS/MS By MS/MS 1 1 11700000 6124300 5576000 4460 1773 4976 11162;11163 10236;10237 10237 3343 2 QMSFDLTK QMQRTITRQMSFDLTK QMSFDLTKLLVTEDWF R Q M T K L 0 0 0 1 0 1 0 0 0 0 1 1 1 1 0 1 1 0 0 0 0 0 8 0 968.46372 Q9ULH0;H0Y8E4;E9PH70 Q9ULH0 916 923 KIDINS220 Kinase D-interacting substrate of 220 kDa yes no 2 0.0072326 97.472 By matching By MS/MS 2 2 17496000 8254500 9241900 4461 2844 4977;4978 11164;11165;11166;11167 10238;10239 10239 5846 2 QMSLCGTPEK NVSRQTSRQMSLCGTP SLCGTPEKSSYRQLSV R Q M E K S 0 0 0 0 1 1 1 1 0 0 1 1 1 0 1 1 1 0 0 0 0 0 10 0 1149.5158 Q9UPU5 Q9UPU5 1283 1292 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.024551 61.419 By MS/MS By matching 1 1 6003300 3316100 2687200 4462 2871 4979 11168;11169 10240;10241 10240 2 QMSVPGIFNPHEIPEEMCD ADEEKHKRQMSVPGIF EIPEEMCD________ R Q M C D - 0 0 1 1 1 1 3 1 1 2 0 0 2 1 3 1 0 0 0 1 0 0 19 0 2228.9541 O14980 O14980 1053 1071 XPO1 Exportin-1 yes yes 2;3 5.3331E-05 82.663 By MS/MS By MS/MS 4 4 123880000 79020000 44857000 4463 1350 4980;4981;4982 11170;11171;11172;11173;11174;11175;11176;11177 10242;10243;10244;10245;10246;10247 10246 160;161 2460 6 QMVETELK LKMIREYRQMVETELK QMVETELKLICCDILD R Q M L K L 0 0 0 0 0 1 2 0 0 0 1 1 1 0 0 0 1 0 0 1 0 0 8 0 976.48993 P62258;K7EIT4 P62258 87 94 YWHAE 14-3-3 protein epsilon yes no 2 0.013284 95.909 By MS/MS 1 2805200 2805200 0 4464 1793 4983 11178 10248 10248 1 QNDPVSKLLNNLDSK Q N S K 0 0 3 2 0 1 0 0 0 0 3 2 0 0 1 2 0 0 0 1 0 0 15 1 1683.8792 REV__Q6Q759 yes yes 3 0.00079782 78.401 By MS/MS By MS/MS 2 2 582710000 297060000 285640000 + 4465 3001 4984 11179;11180;11181;11182 10249;10250 10250 6193 2 QNDTPKGPQPPTVSPIR FEKAAFQKQNDTPKGP PPTVSPIRSSRPPPAK K Q N I R S 0 1 1 1 0 2 0 1 0 1 0 1 0 0 5 1 2 0 0 1 0 0 17 1 1830.9588 P46087 P46087 773 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 3 0.0056574 57.537 By MS/MS By MS/MS 1 2 26437000 12273000 14164000 4466 1707 4985 11183;11184;11185 10251;10252 10251 3155 1 QNGSNDSDRYSDNEEDSKIELK SSSAENTRQNGSNDSD EDSKIELKLEKREPLK R Q N L K L 0 1 3 4 0 1 3 1 0 1 1 2 0 0 0 4 0 0 1 0 0 0 22 2 2542.1055 G5E972;P42167;H0YJH7 G5E972 174 195 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3;4 6.0408E-15 118.52 By MS/MS By MS/MS 6 8 1460000000 820450000 639580000 4467 990 4986;4987;4988;4989 11186;11187;11188;11189;11190;11191;11192;11193;11194;11195;11196;11197;11198;11199 10253;10254;10255;10256;10257;10258;10259;10260;10261;10262;10263;10264;10265;10266 10253 9;32 1812;1813;1814;7428 14 QNITNQLEKWMK ANLTEWKRQNITNQLE NQLEKWMKLNVEEGLY R Q N M K L 0 0 2 0 0 2 1 0 0 1 1 2 1 0 0 0 1 1 0 0 0 0 12 1 1531.7817 Q68CQ7 Q68CQ7 256 267 GLT8D1 Glycosyltransferase 8 domain-containing protein 1 yes yes 2 0.011283 59.57 By MS/MS 1 0 0 0 4468 2132 4990 11200 10267 10267 1 QNLWFANPGGSNSMPSQSR PSLGGQGRQNLWFANP NSMPSQSRSSVQRTHS R Q N S R S 1 1 3 0 0 2 0 2 0 0 1 0 1 1 2 4 0 1 0 0 0 0 19 0 2076.9436 M0QZ22;Q5PRF9;M0QX45 M0QZ22 616 634 SAMD4B Protein Smaug homolog 2 yes no 2;3 1.0572E-06 99.11 By MS/MS By MS/MS 3 3 19081000 9974400 9106700 4469 1308 4991;4992 11201;11202;11203;11204;11205;11206 10268;10269;10270;10271;10272 10272 147 2350;2351 5 QNMYRGYRPR GEQGRPVRQNMYRGYR MYRGYRPRFRRGPPRQ R Q N P R F 0 3 1 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 2 0 0 0 10 2 1339.6568 H0Y449;P67809;C9J5V9 H0Y449 285 294 YBX1 Nuclease-sensitive element-binding protein 1 yes no 2 0.029497 45.335 By MS/MS 1 0 0 0 4470 1015 4993 11207 10273 10273 1 QNNFSLAMK KMIDSARKQNNFSLAM NNFSLAMKLLKELHKE K Q N M K L 1 0 2 0 0 1 0 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 9 0 1051.5121 P78527 P78527 3249 3257 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.022605 50.452 By MS/MS 1 0 0 0 4471 1816 4994 11208 10274 10274 1 QNSATESADSIEIYVPEAQTR AKRAASVRQNSATESA YVPEAQTRL_______ R Q N T R L 3 1 1 1 0 2 3 0 0 2 0 0 0 0 1 3 2 0 1 1 0 0 21 0 2308.0819 A0A0B4J2C2;Q9Y2H0 A0A0B4J2C2 264 284 DLGAP4 Disks large-associated protein 4 yes no 2 0.0015501 67.136 By matching By MS/MS 1 1 8026400 3836400 4190000 4472 261 4995 11209;11210 10275;10276 10275 476;6297 2 QNSDPTSENPPLPTR SHRVEMPRQNSDPTSE ENPPLPTRIEKFDRSS R Q N T R I 0 1 2 1 0 1 1 0 0 0 1 0 0 0 4 2 2 0 0 0 0 0 15 0 1651.7802 Q9UKE5 Q9UKE5 638 652 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 8.3156E-24 153.94 By MS/MS By MS/MS 1 2 44589000 23732000 20857000 4473 2828 4996 11211;11212;11213 10277;10278;10279 10278 5823 3 QNSIENDIEEK SPETKCPKQNSIENDI IENDIEEKVSDLASRG K Q N E K V 0 0 2 1 0 1 3 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 11 0 1317.6048 F5GXF5;E7ETD6;Q12830 F5GXF5 1245 1255 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 4.8592E-06 130.56 By MS/MS By MS/MS 1 1 15827000 9103700 6723600 4474 736 4997 11214;11215 10280;10281 10280 1323 2 QNSLGCIGECGVDSGFEAPR CKPLSTFRQNSLGCIG DSGFEAPRLGEQGGDF R Q N P R L 1 1 1 1 2 1 2 4 0 1 1 0 0 1 1 2 0 0 0 1 0 0 20 0 2151.9314 A1L020 A1L020 336 355 MEX3A RNA-binding protein MEX3A yes yes 2;3 5.6958E-34 138.28 By MS/MS By MS/MS 2 2 28809000 17469000 11340000 4475 390 4998 11216;11217;11218;11219 10282;10283;10284;10285;10286 10285 746 5 QNSQLPAQVQNGPSQEELEIQR YLGPTLPRQNSQLPAQ QEELEIQRRQLQEQQR R Q N Q R R 1 1 2 0 0 6 3 1 0 1 2 0 0 0 2 2 0 0 0 1 0 0 22 0 2492.2255 A0A0U1RRM6;Q8N8S7;A0A075B6E5;A0A0U1RQP7 A0A0U1RRM6 127 148 ENAH Protein enabled homolog yes no 3 5.1345E-09 90.744 By MS/MS By MS/MS 1 1 26747000 11258000 15489000 4476 354 4999 11220;11221 10287;10288 10288 660 2 QNSQLPAQVQNGPSQEELEIQRR YLGPTLPRQNSQLPAQ EELEIQRRQLQEQQRQ R Q N R R Q 1 2 2 0 0 6 3 1 0 1 2 0 0 0 2 2 0 0 0 1 0 0 23 1 2648.3267 A0A0U1RRM6;Q8N8S7;A0A075B6E5;A0A0U1RQP7 A0A0U1RRM6 127 149 ENAH Protein enabled homolog yes no 3 0.00012188 68.97 By MS/MS By MS/MS 1 1 72067000 33647000 38420000 4477 354 5000 11222;11223 10289;10290 10290 660 2 QNSSSSDSGGSIVR KVPANITRQNSSSSDS DSGGSIVRDSQRHKQL R Q N V R D 0 1 1 1 0 1 0 2 0 1 0 0 0 0 0 6 0 0 0 1 0 0 14 0 1379.6277 Q12929 Q12929 657 670 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 2 4.4647E-05 116.58 By MS/MS By MS/MS 3 4 26437000 12144000 14293000 4478 1886 5001 11224;11225;11226;11227;11228;11229;11230 10291;10292;10293;10294;10295;10296;10297;10298 10296 3597;3598 8 QNSTGQAQIR HIPLALPRQNSTGQAQ STGQAQIRKVDQGGLG R Q N I R K 1 1 1 0 0 3 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 10 0 1101.5527 H0Y638;Q9UJF2 H0Y638 413 422 RASAL2 Ras GTPase-activating protein nGAP yes no 2 0.0086593 97.452 By MS/MS 2 0 0 0 4479 1030 5002 11231;11232 10299;10300 10300 1917 2 QNSTSLTGKPGALPANLDDMK PGPCGLARQNSTSLTG PANLDDMKVAELKQEL R Q N M K V 2 0 2 2 0 1 0 2 0 0 3 2 1 0 2 2 2 0 0 0 0 0 21 1 2157.0736 W0Z7M9;E7ER32;A0A087X287;Q969V6;B0QY83;A0A087WU73 W0Z7M9 366 386 mkl1;MKL1 MKL/myocardin-like protein 1 yes no 3 0.004781 53.254 By MS/MS 1 5865900 5865900 0 4480 3015 5003 11233 10301 10301 6213 1 QNSVPPSQTKSETSWESPKQIK DKSKSNTKQNSVPPSQ WESPKQIKKKKKARRE K Q N I K K 0 0 1 0 0 3 2 0 0 1 0 3 0 0 3 5 2 1 0 1 0 0 22 2 2485.2449 E5RJU9;Q86UE4 E5RJU9 496 517 MTDH Protein LYRIC yes no 3 0.027155 46.702 By MS/MS 1 0 0 0 4481 701 5004 11234 10302 10302 1 QNTAWDTETSPR GWGQTPIKQNTAWDTE WDTETSPRGERKTDNG K Q N P R G 1 1 1 1 0 1 1 0 0 0 0 0 0 0 1 1 3 1 0 0 0 0 12 0 1404.627 Q8NDV7 Q8NDV7 730 741 TNRC6A Trinucleotide repeat-containing gene 6A protein yes yes 2 0.014762 64.103 By matching By MS/MS 1 1 3139600 1472300 1667300 4482 2346 5005 11235;11236 10303 10303 4707 1 QNTSTPVRK NATPNTPRQNTSTPVR NTSTPVRKPGPLPSSL R Q N R K P 0 1 1 0 0 1 0 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 9 1 1029.5567 Q9ULH7 Q9ULH7 373 381 MKL2 MKL/myocardin-like protein 2 yes yes 2 0.02488 66.595 By MS/MS By matching 1 1 38671000 22508000 16163000 4483 2845 5006 11237;11238 10304 10304 1 QPAPKPEPSFSEYASVQVPR VHLNRTPKQPAPKPEP YASVQVPRK_______ K Q P P R K 2 1 0 0 0 2 2 0 0 0 0 1 0 1 5 3 0 0 1 2 0 0 20 1 2213.1117 P78324 P78324 484 503 SIRPA Tyrosine-protein phosphatase non-receptor type substrate 1 yes yes 3 0.0054607 53.779 By MS/MS 1 2847100 2847100 0 4484 1813 5007 11239 10305 10305 3383 1 QPAQSQNLSPLSGFSR DNHVGTSKQPAQSQNL SPLSGFSRSRQTQDWV K Q P S R S 1 1 1 0 0 3 0 1 0 0 2 0 0 1 2 4 0 0 0 0 0 0 16 0 1715.8591 A6PVU7;Q9P2M7 A6PVU7 250 265 CGN Cingulin yes no 2 0.0011908 77.051 By MS/MS By matching 1 1 3887000 1970500 1916500 4485 426 5008 11240;11241 10306 10306 801 1 QPDISCILGTGGKSPR PTSRSLLRQPDISCIL GTGGKSPRLTQSSGFF R Q P P R L 0 1 0 1 1 1 0 3 0 2 1 1 0 0 2 2 1 0 0 0 0 0 16 1 1684.8567 G3V1T4;P57740 G3V1T4 73 88 NUP107 Nuclear pore complex protein Nup107 yes no 3 2.1737E-06 113.23 By MS/MS By MS/MS 1 1 23318000 13666000 9651900 4486 961 5009 11242;11243 10307;10308;10309;10310 10307 1749;6486 4 QPESKESAAEGAGLSPK Q P P K 3 0 0 0 0 1 3 2 0 0 1 2 0 0 2 3 0 0 0 0 0 0 17 1 1684.8268 REV__Q02952 yes yes 2 0.0030837 62.966 By matching By MS/MS 1 1 21182000 12493000 8688900 + 4487 2988 5010 11244;11245 10311 10311 6178;6179 1 QPEYSPESPR LHLESPQRQPEYSPES EYSPESPRCQPKPSEE R Q P P R C 0 1 0 0 0 1 2 0 0 0 0 0 0 0 3 2 0 0 1 0 0 0 10 0 1188.5411 Q9H6F5 Q9H6F5 106 115 CCDC86 Coiled-coil domain-containing protein 86 yes yes 2 0.0023355 89.356 By MS/MS By matching 1 1 15526000 9866200 5659700 4488 2666 5011 11246;11247 10312;10313 10312 5441 2 QPGQVIGATTPSTGSPTNK NPYVIMDKQPGQVIGA STGSPTNKISTASQVS K Q P N K I 1 0 1 0 0 2 0 3 0 1 0 1 0 0 3 2 4 0 0 1 0 0 19 0 1839.9327 Q9ULM3 Q9ULM3 505 523 YEATS2 YEATS domain-containing protein 2 yes yes 3 0.0012623 71.402 By MS/MS By matching 1 1 6850000 3199600 3650500 4489 2853 5012 11248;11249 10314 10314 5876;7096 1 QPGVDSLSPVASLPK ASFPRNQKQPGVDSLS SPVASLPKQIFQPSVQ K Q P P K Q 1 0 0 1 0 1 0 1 0 0 2 1 0 0 3 3 0 0 0 2 0 0 15 0 1493.809 Q9UBW7;A0A087X151 Q9UBW7 298 312 ZMYM2 Zinc finger MYM-type protein 2 yes no 2 0.0021884 74.611 By MS/MS By MS/MS 1 1 9281400 4321800 4959600 4490 2804 5013 11250;11251 10315;10316 10316 5746;5747 2 QPLFVPTTSGPSTPPGLVLPHTEFQPAPK LPTQTAPKQPLFVPTT TEFQPAPKQDSSPHLT K Q P P K Q 1 0 0 0 0 2 1 2 1 0 3 1 0 2 8 2 4 0 0 2 0 0 29 0 3039.607 Q96T58 Q96T58 3455 3483 SPEN Msx2-interacting protein yes yes 3 0.00098764 57.738 By MS/MS By MS/MS 1 1 9973200 5432000 4541200 4491 2545 5014 11252;11253 10317;10318 10317 5147;7019;7020 2 QPLLLSEDEEDTK PVGGNYGKQPLLLSED SEDEEDTKRVVRSAKD K Q P T K R 0 0 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 13 0 1515.7304 Q99613;B5ME19;H3BPE4 Q99613 34 46 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.003793 77.24 By MS/MS By MS/MS 1 1 15417000 8694100 6722500 4492 509 5015 11254;11255 10319;10320 10320 948 2 QPLLLSEDEEDTKR PVGGNYGKQPLLLSED EDEEDTKRVVRSAKDK K Q P K R V 0 1 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 14 1 1671.8315 Q99613;B5ME19;H3BPE4 Q99613 34 47 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 6.5257E-72 200.63 By MS/MS By MS/MS 2 2 429530000 242260000 187280000 4493 509 5016 11256;11257;11258;11259 10321;10322;10323;10324;10325;10326;10327;10328;10329;10330;10331 10330 948 11 QPPGVPNGPSSPTNESAPELPQR APPPPPYRQPPGVPNG SAPELPQRHNSLHRKT R Q P Q R H 1 1 2 0 0 2 2 2 0 0 1 0 0 0 7 3 1 0 0 1 0 0 23 0 2355.1455 Q8TF74 Q8TF74 257 279 WIPF2 WAS/WASL-interacting protein family member 2 yes yes 3 0.00032975 66.045 By MS/MS By MS/MS 1 1 12186000 6831700 5354200 4494 2394 5017 11260;11261 10332;10333;10334 10334 4788;6973 3 QPSATRLPK GSSQRMPRQPSATRLP PSATRLPKGGGPGKSP R Q P P K G 1 1 0 0 0 1 0 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 9 1 996.57163 H7BZ50;H7C173;B8ZZ87;Q6P582;Q6NZ67 H7BZ50 100 108 MZT2B;MZT2A Mitotic-spindle organizing protein 2A;Mitotic-spindle organizing protein 2B yes no 2;3 0.0091825 80.24 By MS/MS By matching 2 1 30220000 15476000 14744000 4495 530 5018 11262;11263;11264 10335;10336 10336 969 2 QPSDASETTGLVQR RKSPSHHRQPSDASET ETTGLVQRCVIIQKDQ R Q P Q R C 1 1 0 1 0 2 1 1 0 0 1 0 0 0 1 2 2 0 0 1 0 0 14 0 1487.7216 O15085 O15085 33 46 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 2 0.006146 66.326 By matching By MS/MS 1 1 6807300 3258600 3548700 4496 1357 5019 11265;11266 10337 10337 2477 1 QPSEEEIIK KKYKDIIRQPSEEEII PSEEEIIKLAPPPKKA R Q P I K L 0 0 0 0 0 1 3 0 0 2 0 1 0 0 1 1 0 0 0 0 0 0 9 0 1071.5448 B1AKZ5;Q15121 B1AKZ5 92 100 PEA15 Astrocytic phosphoprotein PEA-15 yes no 2 0.003469 91.701 By MS/MS By MS/MS 1 1 17488000 8990800 8496800 4497 459 5020 11267;11268 10338;10339;10340;10341;10342 10339 887 5 QPSSPSHNTNLR NGILGGSRQPSSPSHN PSHNTNLRAGSQEFWA R Q P L R A 0 1 2 0 0 1 0 0 1 0 1 0 0 0 2 3 1 0 0 0 0 0 12 0 1336.6484 J3KPG5;F8VU39;Q9UIF9 J3KPG5 132 143 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 3 0.017127 54.276 By MS/MS By matching 1 1 3631300 2821000 810250 4498 917 5021 11269;11270 10343 10343 1649;1650 1 QPTPPFFGR GGFDGQARQPTPPFFG PTPPFFGRDRSPLRRS R Q P G R D 0 1 0 0 0 1 0 1 0 0 0 0 0 2 3 0 1 0 0 0 0 0 9 0 1045.5345 Q96PK6 Q96PK6 204 212 RBM14 RNA-binding protein 14 yes yes 2 2.2011E-09 169.76 By MS/MS By MS/MS 1 1 152810000 77745000 75066000 4499 2524 5022 11271;11272 10344;10345;10346;10347;10348;10349;10350;10351;10352;10353;10354;10355 10348 7012 12 QPTPPSEAAASK VEPVPVTKQPTPPSEA PSEAAASKKKPGQKKS K Q P S K K 3 0 0 0 0 1 1 0 0 0 0 1 0 0 3 2 1 0 0 0 0 0 12 0 1182.5881 Q86UP2 Q86UP2 151 162 KTN1 Kinectin yes yes 2 0.00017348 118.73 By MS/MS By MS/MS 1 1 10505000 5207200 5297600 4500 2236 5023 11273;11274 10356;10357 10356 4480;6940 1 QPVSEPPADQVASDMPHSPTLR VEKYFVERQPVSEPPA MPHSPTLRVDRKRKVS R Q P L R V 2 1 0 2 0 2 1 0 1 0 1 0 1 0 5 3 1 0 0 2 0 0 22 0 2358.1274 H7BYY2;Q6W2J9;H7C2V9 H7BYY2 1110 1131 BCOR BCL-6 corepressor yes no 3 0.019488 42.708 By matching By MS/MS 1 1 11297000 6335900 4961000 4501 1155 5024 11275;11276 10358 10358 2103 1 QQAAYYAQTSPQGMPQHPPAPQGQ AAWAEYYRQQAAYYAQ HPPAPQGQ________ R Q Q G Q - 4 0 0 0 0 7 0 2 1 0 0 0 1 0 5 1 1 0 2 0 0 0 24 0 2580.1816 Q96AE4 Q96AE4 621 644 FUBP1 Far upstream element-binding protein 1 yes yes 3 0.0023591 54.008 By MS/MS By MS/MS 1 1 155530000 87387000 68147000 4502 2457 5025 11277;11278 10359;10360 10359 4946;6994 2 QQASKSPYNGVR VKKEPEDRQQASKSPY KSPYNGVRKDSKRSRN R Q Q V R K 1 1 1 0 0 2 0 1 0 0 0 1 0 0 1 2 0 0 1 1 0 0 12 1 1333.6739 Q9UK58 Q9UK58 369 380 CCNL1 Cyclin-L1 yes yes 2 0.0044687 88.803 By MS/MS By MS/MS 1 2 5100100 2801900 2298200 4503 2825 5026 11279;11280;11281 10361;10362 10362 5810;5811 2 QQDKDSPSESDVILPCPK GPKNMKHRQQDKDSPS DVILPCPKAEKPHSGN R Q Q P K A 0 0 0 3 1 2 1 0 0 1 1 2 0 0 3 3 0 0 0 1 0 0 18 1 2041.9626 Q4L180 Q4L180 35 52 FILIP1L Filamin A-interacting protein 1-like yes yes 3 0.0036799 58.885 By MS/MS By matching 1 1 8140300 4086500 4053800 4504 2049 5027 11282;11283 10363 10363 4013;4014 1 QQFYHSVQDLSGGSR CVDMSTNRQQFYHSVQ QDLSGGSRQHEAPSNR R Q Q S R Q 0 1 0 1 0 3 0 2 1 0 1 0 0 1 0 3 0 0 1 1 0 0 15 0 1707.7965 P10398 P10398 152 166 ARAF Serine/threonine-protein kinase A-Raf yes yes 2 0.001424 71.548 By MS/MS By MS/MS 1 1 29426000 15066000 14360000 4505 1555 5028 11284;11285 10364;10365 10364 7558 2 QQIQSIQQSIER IKEGSQLKQQIQSIQQ SIQQSIERLLV_____ K Q Q E R L 0 1 0 0 0 5 1 0 0 3 0 0 0 0 0 2 0 0 0 0 0 0 12 0 1456.7634 B1AHD1;P55769 B1AHD1 118 129 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 2 6.7663E-07 124.47 By MS/MS By MS/MS 1 1 4932700 2969000 1963700 4506 452 5029 11286;11287 10366;10367 10366 881;882 2 QQLEEEEENFSRPQIDENPLDDNSEEEMEDAPK REMVALLKQQLEEEEE EEMEDAPKQKLSKKQK K Q Q P K Q 1 1 3 4 0 3 10 0 0 1 2 1 1 1 3 2 0 0 0 0 0 0 33 1 3932.6654 Q5F1R6 Q5F1R6 347 379 DNAJC21 DnaJ homolog subfamily C member 21 yes yes 3 0.0057205 45.836 By MS/MS 1 24603000 0 24603000 4507 2065 5030 11288 10368 10368 4054 1 QQLQMEVKMLSSSK LNLILQKKQQLQMEVK VKMLSSSKSMKELTEE K Q Q S K S 0 0 0 0 0 3 1 0 0 0 2 2 2 0 0 3 0 0 0 1 0 0 14 1 1635.8324 P12757 P12757 553 566 SKIL Ski-like protein yes yes 3 0.018472 50.286 By MS/MS 1 0 0 0 4508 1572 5031 11289 10369 10369 2888;2889;2890 1 QQLSAEELDAQLDAYNAR RGAGRNSKQQLSAEEL QLDAYNARMDTS____ K Q Q A R M 4 1 1 2 0 3 2 0 0 0 3 0 0 0 0 1 0 0 1 0 0 0 18 0 2033.9654 E9PB61;Q86V81 E9PB61 243 260 ALYREF THO complex subunit 4 yes no 2 0.00026908 78.234 By MS/MS By MS/MS 1 1 16233000 8936600 7296000 4509 757 5032 11290;11291 10370;10371 10370 1381 2 QQPPEPEWIGDGESTSPSDK ________________ ESTSPSDKVVKKGKKD K Q Q D K V 0 0 0 2 0 2 3 2 0 1 0 1 0 0 4 3 1 1 0 0 0 0 20 0 2182.9655 Q5STZ8;Q8NE71;A0A0G2JIC2 Q5STZ8 7 26 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 0.010941 54.276 By MS/MS By matching 2 2 36497000 18886000 17611000 4510 2088 5033 11292;11293;11294;11295 10372;10373 10372 4120;4121;6875 2 QQPPEPEWIGDGESTSPSDKVVK ________________ SPSDKVVKKGKKDKKI K Q Q V K K 0 0 0 2 0 2 3 2 0 1 0 2 0 0 4 3 1 1 0 2 0 0 23 1 2509.1973 Q5STZ8;Q8NE71;A0A0G2JIC2 Q5STZ8 7 29 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 0.00048226 63.706 By MS/MS By MS/MS 1 1 111830000 65034000 46793000 4511 2088 5034 11296;11297 10374;10375 10374 4120;4121;6875 2 QQPPLGPSSSLLSLPGLK AIHEERRRQQPPLGPS LLSLPGLKSRGSRAAG R Q Q L K S 0 0 0 0 0 2 0 2 0 0 5 1 0 0 4 4 0 0 0 0 0 0 18 0 1818.0251 Q4KMP7 Q4KMP7 649 666 TBC1D10B TBC1 domain family member 10B yes yes 2;3 2.2936E-32 149.19 By MS/MS By MS/MS 3 2 107780000 65992000 41792000 4512 2047 5035;5036 11298;11299;11300;11301;11302 10376;10377;10378;10379 10378 4008;4009;4010 4 QQPPLGPSSSLLSLPGLKSR AIHEERRRQQPPLGPS SLPGLKSRGSRAAGGA R Q Q S R G 0 1 0 0 0 2 0 2 0 0 5 1 0 0 4 5 0 0 0 0 0 0 20 1 2061.1582 Q4KMP7 Q4KMP7 649 668 TBC1D10B TBC1 domain family member 10B yes yes 3 0.030354 40.186 By matching By MS/MS 1 1 3795200 2120600 1674700 4513 2047 5037 11303;11304 10380 10380 4008;4009;4010 1 QQPQPSQTESPQEAQIIQAK RSSRLQAKQQPQPSQT EAQIIQAKKRKTTQFT K Q Q A K K 2 0 0 0 0 7 2 0 0 2 0 1 0 0 3 2 1 0 0 0 0 0 20 0 2235.1131 E5RHN2;E5RK20;Q8WUE3;O96020 E5RHN2 12 31 CCNE2 G1/S-specific cyclin-E2 yes no 3 2.4472E-05 78.976 By MS/MS By MS/MS 1 1 17083000 10062000 7020400 4514 698 5038 11305;11306 10381;10382 10381 1236 2 QQQEPTGEPSPK RGRGRPRKQQQEPTGE PTGEPSPKRPRGRPKG K Q Q P K R 0 0 0 0 0 3 2 1 0 0 0 1 0 0 3 1 1 0 0 0 0 0 12 0 1324.6259 P52926;F5H2U8;F5H2A4;F5H6H0 P52926 35 46 HMGA2 High mobility group protein HMGI-C yes no 2 1.1812E-06 120.84 By MS/MS By MS/MS 1 1 10707000 5465500 5241800 4515 1758 5039 11307;11308 10383;10384;10385;10386 10385 3317;6733 4 QQQQQLDQKSAATR EMLKYQRRQQQQQLDQ DQKSAATREMGSATSV R Q Q T R E 2 1 0 1 0 6 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 14 1 1628.823 P54198 P54198 408 421 HIRA Protein HIRA yes yes 2 0.012281 46.68 By MS/MS By matching 1 1 6469400 3043600 3425800 4516 1767 5040 11309;11310 10387 10387 3334 1 QQSEEDLLLQDFSR MAPKGSSKQQSEEDLL LLLQDFSRNLSAKSSA K Q Q S R N 0 1 0 2 0 3 2 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 14 0 1706.8111 C9JA28;Q9UNL2 C9JA28 9 22 SSR3 Translocon-associated protein subunit gamma yes no 2 1.1327E-08 128.88 By MS/MS By MS/MS 1 1 47685000 26055000 21631000 4517 576 5041 11311;11312 10388;10389;10390;10391 10390 1054 4 QQSGNANTETLPSGWEQRK DGCMDPVRQQSGNANT PSGWEQRKDPHGRTYY R Q Q R K D 1 1 2 0 0 3 2 2 0 0 1 1 0 0 1 2 2 1 0 0 0 0 19 1 2130.009 Q9H0M0 Q9H0M0 341 359 WWP1 NEDD4-like E3 ubiquitin-protein ligase WWP1 yes yes 3 0.020333 47.942 By MS/MS By matching 1 1 4436000 1737700 2698300 4518 2631 5042 11313;11314 10392 10392 5353 0 QQSIEDKEDKPPPR SSMGSMFRQQSIEDKE KEDKPPPRQKFIQSEM R Q Q P R Q 0 1 0 2 0 2 2 0 0 1 0 2 0 0 3 1 0 0 0 0 0 0 14 2 1665.8322 Q5JSZ5;Q5JT00 Q5JSZ5 478 491 PRRC2B Protein PRRC2B yes no 3 0.0050853 65.563 By MS/MS By matching 2 1 24127000 16052000 8075500 4519 2074 5043 11315;11316;11317 10393 10393 4085 1 QQSKSNNVEETEIHWK PIEHGFRRQQSKSNNV EETEIHWKLIPITGGN R Q Q W K L 0 0 2 0 0 2 3 0 1 1 0 2 0 0 0 2 1 1 0 1 0 0 16 1 1955.9337 Q9UK61;A0A087X0F1 Q9UK61 901 916 FAM208A Protein FAM208A yes no 3 0.011538 51.695 By matching By MS/MS 1 1 12203000 6606800 5595700 4520 2826 5044 11318;11319 10394 10394 5814;5815 1 QQTEKPESEDEWER KKKTGGSKQQTEKPES ESEDEWERTERERLQD K Q Q E R T 0 1 0 1 0 2 5 0 0 0 0 1 0 0 1 1 1 1 0 0 0 0 14 1 1789.7755 A2AB15;A0A140T947;O60231 A2AB15 93 106 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 2;3 0.0016848 87.083 By MS/MS By MS/MS 2 2 54006000 25824000 28182000 4521 360 5045 11320;11321;11322;11323 10395;10396;10397 10395 670 3 QQTEKPESEDEWERTER KKKTGGSKQQTEKPES DEWERTERERLQDLEE K Q Q E R E 0 2 0 1 0 2 6 0 0 0 0 1 0 0 1 1 2 1 0 0 0 0 17 2 2175.9669 A2AB15;A0A140T947;O60231 A2AB15 93 109 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 3 0.0024615 66.568 By MS/MS By matching 1 1 66750000 37023000 29727000 4522 360 5046 11324;11325 10398 10398 670 1 QQTQQVQSPVDSATMSPVER PKVRAIQRQQTQQVQS ATMSPVERTAAWVLNN R Q Q E R T 1 1 0 1 0 5 1 0 0 0 0 0 1 0 2 3 2 0 0 3 0 0 20 0 2215.0539 H0Y638;Q9UJF2 H0Y638 490 509 RASAL2 Ras GTPase-activating protein nGAP yes no 3 0.00072729 69.612 By MS/MS By MS/MS 2 2 21225000 13007000 8218000 4523 1030 5047;5048 11326;11327;11328;11329 10399;10400;10401 10400 126 1918;1919;6514 3 QQVPSGESAILDR KELLIFNKQQVPSGES GESAILDRVADGMVFG K Q Q D R V 1 1 0 1 0 2 1 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 13 0 1398.7103 P09874 P09874 270 282 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0037557 87.298 By MS/MS By MS/MS 1 1 7392300 3956800 3435600 4524 1550 5049 11330;11331 10402;10403 10403 2 QRAEIYALNR AQQELKQRQRAEIYAL AEIYALNRVMTELEQQ R Q R N R V 2 2 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 10 1 1232.6626 Q8N300 Q8N300 35 44 CCDC23 Coiled-coil domain-containing protein 23 yes yes 2;3 0.00082188 91.584 By MS/MS By MS/MS 2 3 16517000 7118000 9399400 4525 2301 5050 11332;11333;11334;11335;11336 10404;10405;10406;10407 10405 7796 4 QRASLSSAPVVLVGDHA QSKLAQRRQRASLSSA VVLVGDHA________ R Q R H A - 3 1 0 1 0 1 0 1 1 0 2 0 0 0 1 3 0 0 0 3 0 0 17 1 1705.9111 Q9HBH9 Q9HBH9 449 465 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 yes yes 2;3 1.216E-05 98.188 By MS/MS By MS/MS 2 2 15721000 8766800 6954300 4526 2689 5051 11337;11338;11339;11340 10408;10409;10410;10411 10408 5481;5482;5483 4 QRGSETDTDSEIHESASDKDSLSK EVVPKRRRQRGSETDT SDKDSLSKGKLPKREE R Q R S K G 1 1 0 4 0 1 3 1 1 1 1 2 0 0 0 6 2 0 0 0 0 0 24 2 2621.1689 E7EPN9;Q9Y520 E7EPN9 1262 1285 PRRC2C Protein PRRC2C yes no 4 1.17E-10 93.196 By MS/MS By MS/MS 1 1 26229000 18189000 8039600 4527 715 5052 11341;11342 10412;10413 10412 1269;6420 2 QRGSETGSETHESDLAPSDK EEIPKRRRQRGSETGS SDLAPSDKEAPTPKEG R Q R D K E 1 1 0 2 0 1 3 2 1 0 1 1 0 0 1 4 2 0 0 0 0 0 20 1 2129.9461 P48634 P48634 1103 1122 PRRC2A Protein PRRC2A yes yes 3 0.0025809 59.372 By MS/MS 1 2618200 2618200 0 4528 1718 5053 11343 10414 10414 3214 1 QRIDEFESM QIRQGNTKQRIDEFES RIDEFESM________ K Q R S M - 0 1 0 1 0 1 2 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 9 1 1153.5074 P26038 P26038 569 577 MSN Moesin yes yes 2 0.012947 79.489 By MS/MS By MS/MS 1 1 3149400 1369600 1779800 4529 1633 5054 11344;11345 10415;10416 10416 205 3020 2 QRISSPLFNTKQYTMELER KVRGKVWKQRISSPLF QYTMELERLYLQMWEH K Q R E R L 0 2 1 0 0 2 2 0 0 1 2 1 1 1 1 2 2 0 1 0 0 0 19 2 2340.1896 O15294 O15294 1000 1018 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 0.02654 46.159 By MS/MS 1 0 0 0 4530 1364 5055 11346 10417 10417 1 QRLFSQGQDVSNKVK ENLTFKERQRLFSQGQ QDVSNKVKASRKLTEL R Q R V K A 0 1 1 1 0 3 0 1 0 0 1 2 0 1 0 2 0 0 0 2 0 0 15 2 1732.922 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1752 1766 MLLT4 Afadin yes no 3 0.00183 70.987 By MS/MS By MS/MS 1 1 29869000 16089000 13780000 4531 431 5056 11347;11348 10418;10419 10418 816 2 QRMDRLDNLTCHLLK HPHVRLLRQRMDRLDN NLTCHLLKKQAFRPQL R Q R L K K 0 2 1 2 1 1 0 0 1 0 4 1 1 0 0 0 1 0 0 0 0 0 15 2 1911.9771 Q9NU22 Q9NU22 3298 3312 MDN1 Midasin yes yes 2 0.030487 44.188 By MS/MS 1 0 0 0 4532 2734 5057 11349 10420 10420 1 QRPDLGSAQK GVRGTPVRQRPDLGSA PDLGSAQKGLQVDLQS R Q R Q K G 1 1 0 1 0 2 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 1 1098.5782 E5RFR3;P33991;E5RFJ8 E5RFR3 114 123 MCM4 DNA replication licensing factor MCM4 yes no 2 0.0021035 101.56 By MS/MS By MS/MS 1 1 9639300 4267700 5371600 4533 693 5058 11350;11351 10421;10422;10423 10421 1233 3 QRSAPDLKESGAAV TTPPRMRRQRSAPDLK LKESGAAV________ R Q R A V - 3 1 0 1 0 1 1 1 0 0 1 1 0 0 1 2 0 0 0 1 0 0 14 2 1427.7369 O43896 O43896 1090 1103 KIF1C Kinesin-like protein KIF1C yes yes 2 0.023747 74.133 By matching By MS/MS 1 1 19815000 8465600 11349000 4534 1398 5059 11352;11353 10424 10424 2567 1 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER ________________ EPEEQEERKPSATQQK R Q R E R K 3 3 0 5 0 3 6 1 0 0 0 0 0 0 4 7 1 0 0 0 0 0 33 2 3588.4956 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 6 38 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 yes no 4 0.0010323 49.088 By MS/MS By matching 1 1 21940000 12539000 9401000 4535 384 5060 11354;11355 10425;10426 10426 732 2 QRSHILEDDENSVDISMLK MMASGRPRQRSHILED SVDISMLKTGSSLLKE R Q R L K T 0 1 1 3 0 1 2 0 1 2 2 1 1 0 0 3 0 0 0 1 0 0 19 1 2228.0743 O75717 O75717 372 390 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 3 0.022724 43.932 By MS/MS By MS/MS 1 1 11687000 6638800 5048600 4536 1448 5061 11356;11357 10427;10428 10427 2680 2 QRSLGPSLATDKS DFPQNAIRQRSLGPSL PSLATDKS________ R Q R K S - 1 1 0 1 0 1 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 13 2 1358.7154 Q9H3N1 Q9H3N1 268 280 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2;3 0.0017129 98.253 By MS/MS By MS/MS 2 2 292220000 146110000 146110000 4537 2653 5062 11358;11359;11360;11361 10429;10430;10431 10431 5410;5411 3 QRSPIALPVK RPSSFRDRQRSPIALP SPIALPVKQEPPQIDA R Q R V K Q 1 1 0 0 0 1 0 0 0 1 1 1 0 0 2 1 0 0 0 1 0 0 10 1 1107.6764 Q8TF01 Q8TF01 209 218 PNISR Arginine/serine-rich protein PNISR yes yes 2;3 4.2407E-05 121.61 By MS/MS By MS/MS 2 2 20300000 12151000 8149300 4538 2393 5063 11362;11363;11364;11365 10432;10433;10434;10435 10435 4784 4 QRSPIALPVKQEPPQIDAVK RPSSFRDRQRSPIALP PPQIDAVKRRTLPAWI R Q R V K R 2 1 0 1 0 3 1 0 0 2 1 2 0 0 4 1 0 0 0 2 0 0 20 2 2213.2532 Q8TF01 Q8TF01 209 228 PNISR Arginine/serine-rich protein PNISR yes yes 3;4 0.0013022 68.525 By MS/MS By MS/MS 2 1 42414000 24740000 17674000 4539 2393 5064 11366;11367;11368 10436;10437;10438 10436 4784 3 QRSPSPAPAPAPAAAAGPPTR TQRRERYRQRSPSPAP AAAGPPTRKKSRRERK R Q R T R K 7 2 0 0 0 1 0 1 0 0 0 0 0 0 7 2 1 0 0 0 0 0 21 1 1967.0337 Q9H7N4 Q9H7N4 496 516 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2;4 0.0013169 63.639 By MS/MS By MS/MS 2 1 34013000 20782000 13231000 4540 2675 5065 11369;11370;11371 10439;10440 10439 5460;5461 2 QRVAPKPPQMSR SSLHMSDRQRVAPKPP PKPPQMSRAADEALNA R Q R S R A 1 2 0 0 0 2 0 0 0 0 0 1 1 0 3 1 0 0 0 1 0 0 12 2 1393.7612 H0YDB2;E9PNJ4;Q13586;G0XQ39 H0YDB2 293 304 STIM1 Stromal interaction molecule 1 yes no 3 0.029864 42.682 By MS/MS 1 2267300 2267300 0 4541 832 5066 11372 10441 10441 0 QSDDEVYAPGLDIESSLK RDRSIREKQSDDEVYA LDIESSLKQLAERRTD K Q S L K Q 1 0 0 3 0 1 2 1 0 1 2 1 0 0 1 3 0 0 1 1 0 0 18 0 1964.9215 Q15459 Q15459 450 467 SF3A1 Splicing factor 3A subunit 1 yes yes 2 2.517E-06 101.2 By MS/MS By matching 1 1 4639100 3197200 1441800 4542 1991 5067 11373;11374 10442 10442 7717 1 QSETVDQNSDSDEMLAILK PNKLPKSKQSETVDQN DEMLAILKEVSRMSHS K Q S L K E 1 0 1 3 0 2 2 0 0 1 2 1 1 0 0 3 1 0 0 1 0 0 19 0 2121.9736 P46100;A0A096LNL9;A0A096LNW1 P46100 721 739 ATRX Transcriptional regulator ATRX yes no 2 6.776E-28 141.85 By MS/MS By MS/MS 1 1 19096000 9021800 10075000 4543 1708 5068 11375;11376 10443;10444 10443 3164 2 QSFDDNDSEELEDKDSK KKGQKGKKQSFDDNDS ELEDKDSKSKKTAKPK K Q S S K S 0 0 1 5 0 1 3 0 0 0 1 2 0 1 0 3 0 0 0 0 0 0 17 1 1999.8131 A0A087WUT6;O60841 A0A087WUT6 106 122 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 0.00050854 79.283 By MS/MS By MS/MS 2 2 468310000 233550000 234760000 4544 49 5069 11377;11378;11379;11380 10445;10446;10447;10448 10445 81;82 4 QSFDDNDSEELEDKDSKSK KKGQKGKKQSFDDNDS EDKDSKSKKTAKPKVE K Q S S K K 0 0 1 5 0 1 3 0 0 0 1 3 0 1 0 4 0 0 0 0 0 0 19 2 2214.94 A0A087WUT6;O60841 A0A087WUT6 106 124 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.01781 48.641 By MS/MS By matching 1 1 41073000 17027000 24046000 4545 49 5070 11381;11382 10449 10449 81;82 1 QSGLSSLVNGKSPIR ADMNESCKQSGLSSLV VNGKSPIRSLMHRSAR K Q S I R S 0 1 1 0 0 1 0 2 0 1 2 1 0 0 1 4 0 0 0 1 0 0 15 1 1541.8526 H0Y612;Q9UPN9 H0Y612 612 626 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 2;3 6.4672E-05 110.34 By MS/MS By MS/MS 5 5 51697000 30569000 21128000 4546 1029 5071;5072 11383;11384;11385;11386;11387;11388;11389;11390;11391;11392 10450;10451;10452;10453;10454;10455;10456;10457;10458;10459;10460 10451 10 1913;1914;1915 11 QSGSPTLDTAPNGR FGKNIYRKQSGSPTLD LDTAPNGRYGIGYLMA K Q S G R Y 1 1 1 1 0 1 0 2 0 0 1 0 0 0 2 2 2 0 0 0 0 0 14 0 1399.6692 Q9H2J7 Q9H2J7 698 711 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.0024356 79.337 By MS/MS By MS/MS 1 1 26584000 12907000 13676000 4547 2645 5073 11393;11394 10461;10462 10462 5388;5389 2 QSHSESPSLQSK DTSSPEVRQSHSESPS ESPSLQSKSQTSPKGG R Q S S K S 0 0 0 0 0 2 1 0 1 0 1 1 0 0 1 5 0 0 0 0 0 0 12 0 1313.6212 Q9UQ35 Q9UQ35 1078 1089 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 4.1623E-27 174.47 By MS/MS By MS/MS 3 2 23296000 11549000 11747000 4548 2877 5074 11395;11396;11397;11398;11399 10463;10464;10465;10466;10467 10465 5962;5963 4 QSIIRFWLQNLR RFFTSQERQSIIRFWL RFWLQNLRAKQGEALH R Q S L R A 0 2 1 0 0 2 0 0 0 2 2 0 0 1 0 1 0 1 0 0 0 0 12 1 1572.8889 M0QYD2;Q9HCE9 M0QYD2 166 177 ANO8 Anoctamin;Anoctamin-8 yes no 2 0.0087237 56.563 By MS/MS By MS/MS 1 1 7905900 4600800 3305100 4549 1303 5075 11400;11401 10468;10469 10468 2 QSISFPEGLR ALTADLPKQSISFPEG ISFPEGLRTPASPSSA K Q S L R T 0 1 0 0 0 1 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1132.5877 H7C3M7;O94887 H7C3M7 73 82 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 yes no 2 0.0016463 100.04 By MS/MS By MS/MS 1 1 7717900 4277400 3440500 4550 1183 5076 11402;11403 10470;10471;10472 10470 2146 3 QSLGELIGTLNAAK NWKMNGRKQSLGELIG IGTLNAAKVPADTEVV K Q S A K V 2 0 1 0 0 1 1 2 0 1 3 1 0 0 0 1 1 0 0 0 0 0 14 0 1413.7827 P60174 P60174 57 70 TPI1 Triosephosphate isomerase yes yes 2 0.006536 72.531 By MS/MS 1 1152000 1152000 0 4551 1781 5077 11404 10473 10473 1 QSLGHPPPEPGPDRVADAKGDSESEEDEDLEVPVPSR VLPAATPRQSLGHPPP LEVPVPSRFNRRVSVC R Q S S R F 2 2 0 5 0 1 6 3 1 0 2 1 0 0 7 4 0 0 0 3 0 0 37 2 3936.825 P13861 P13861 57 93 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 4 0.0039176 42.253 By MS/MS 1 31323000 0 31323000 4552 1577 5078 11405 10474 10474 2897;2898 1 QSLPASPR RERSLKKRQSLPASPR QSLPASPRARLSASTA R Q S P R A 1 1 0 0 0 1 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 8 0 854.46102 Q3KQU3;H0YF21 Q3KQU3 441 448 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.0066253 100.69 By MS/MS By MS/MS 1 1 16709000 8575600 8133000 4553 2036 5079 11406;11407 10475;10476;10477;10478 10475 3984 4 QSMAFSILNTPK STKQADRRQSMAFSIL FSILNTPKKLGNSLLR R Q S P K K 1 0 1 0 0 1 0 0 0 1 1 1 1 1 1 2 1 0 0 0 0 0 12 0 1335.6857 A0A087WY61;Q14980;H0YFY6 A0A087WY61 2030 2041 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.0053787 99.5 By MS/MS By matching 1 1 3959400 2185000 1774400 4554 95 5080 11408;11409 10479 10479 6239 1 QSMDMSPIK PFLRGHTKQSMDMSPI SMDMSPIKIVKNPDGS K Q S I K I 0 0 0 1 0 1 0 0 0 1 0 1 2 0 1 2 0 0 0 0 0 0 9 0 1035.4729 F5H658;Q14562 F5H658 455 463 DHX8 ATP-dependent RNA helicase DHX8 yes no 2 0.0043336 100.09 By MS/MS By MS/MS 1 1 21831000 10879000 10952000 4555 891 5081 11410;11411 10480;10481 10481 1599 2 QSMDMSPIKIVK PFLRGHTKQSMDMSPI MSPIKIVKNPDGSLSQ K Q S V K N 0 0 0 1 0 1 0 0 0 2 0 2 2 0 1 2 0 0 0 1 0 0 12 1 1375.7203 F5H658;Q14562 F5H658 455 466 DHX8 ATP-dependent RNA helicase DHX8 yes no 2 8.8557E-07 124.48 By MS/MS By MS/MS 1 1 10665000 6244700 4419800 4556 891 5082 11412;11413 10482;10483 10482 1599 2 QSNASSDVEVEEK SSQQAATKQSNASSDV SDVEVEEKETSVSKED K Q S E K E 1 0 1 1 0 1 3 0 0 0 0 1 0 0 0 3 0 0 0 2 0 0 13 0 1420.6318 O75475 O75475 101 113 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 1.5676E-104 224.34 By MS/MS By MS/MS 1 2 87877000 42010000 45866000 4557 1440 5083 11414;11415;11416 10484;10485;10486 10486 2658;2659 3 QSNASSDVEVEEKETSVSK SSQQAATKQSNASSDV EKETSVSKEDTDHEEK K Q S S K E 1 0 1 1 0 1 4 0 0 0 0 2 0 0 0 5 1 0 0 3 0 0 19 1 2051.9495 O75475 O75475 101 119 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 0.0010558 73.887 By matching By MS/MS 1 1 10101000 4132200 5968700 4558 1440 5084 11417;11418 10487 10487 2658;2659 1 QSNASSDVEVEEKETSVSKEDTDHEEK SSQQAATKQSNASSDV EDTDHEEKASNEDVTK K Q S E K A 1 0 1 3 0 1 7 0 1 0 0 3 0 0 0 5 2 0 0 3 0 0 27 2 3035.3327 O75475 O75475 101 127 PSIP1 PC4 and SFRS1-interacting protein yes yes 3;4 3.8926E-08 80.835 By MS/MS By MS/MS 2 2 71560000 35015000 36545000 4559 1440 5085 11419;11420;11421;11422 10488;10489;10490 10489 2658;2659;6629 3 QSNVAAPGDATPPAEK LKPIPLKRQSNVAAPG DATPPAEKKYKPLNTT R Q S E K K 4 0 1 1 0 1 1 1 0 0 0 1 0 0 3 1 1 0 0 1 0 0 16 0 1551.7529 Q96QC0 Q96QC0 246 261 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 2 0.0011396 87.669 By MS/MS By MS/MS 1 1 20806000 10658000 10148000 4560 2529 5086 11423;11424 10491;10492 10491 7013 2 QSNVAAPGDATPPAEKK LKPIPLKRQSNVAAPG ATPPAEKKYKPLNTTP R Q S K K Y 4 0 1 1 0 1 1 1 0 0 0 2 0 0 3 1 1 0 0 1 0 0 17 1 1679.8479 Q96QC0 Q96QC0 246 262 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 2 0.0074695 73.927 By matching By MS/MS 1 1 5028100 2134500 2893600 4561 2529 5087 11425;11426 10493 10493 7013 1 QSPASPPPLGGGAPVR ASPSPTSRQSPASPPP LGGGAPVRTAKAERRH R Q S V R T 2 1 0 0 0 1 0 3 0 0 1 0 0 0 5 2 0 0 0 1 0 0 16 0 1486.7892 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1363 1378 SCRIB Protein scribble homolog yes no 2;3 2.391E-36 172.09 By MS/MS By MS/MS 2 1 152680000 77737000 74945000 4562 322 5088 11427;11428;11429 10494;10495;10496;10497;10498;10499;10500;10501 10501 604 8 QSPASPPPLGGGAPVRTAK ASPSPTSRQSPASPPP GAPVRTAKAERRHQER R Q S A K A 3 1 0 0 0 1 0 3 0 0 1 1 0 0 5 2 1 0 0 1 0 0 19 1 1786.969 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1363 1381 SCRIB Protein scribble homolog yes no 3 4.4744E-05 80.541 By MS/MS By MS/MS 1 1 11927000 6646600 5280600 4563 322 5089 11430;11431 10502;10503 10502 604 2 QSPGPALAR AAAAASVRQSPGPALA SPGPALARLEGREFEF R Q S A R L 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 9 0 895.48756 P85037 P85037 100 108 FOXK1 Forkhead box protein K1 yes yes 2 0.013259 70.399 By matching By MS/MS 1 1 37092000 17641000 19451000 4564 1818 5090 11432;11433 10504 10504 3396 1 QSQQPMKPISPVKDPVSPASQK LEGDHTIRQSQQPMKP PVSPASQKMVIQGPSS R Q S Q K M 1 0 0 1 0 4 0 0 0 1 0 3 1 0 5 4 0 0 0 2 0 0 22 2 2376.2471 Q12888;A6NNK5 Q12888 1085 1106 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.00044878 70.02 By MS/MS By MS/MS 2 2 65334000 37597000 27737000 4565 1882 5091;5092 11434;11435;11436;11437 10505;10506;10507 10505 3581 3 QSSGPSSSPAAAAAPEK KEGSPLHKQSSGPSSS AAAAAPEKPGPKAAEV K Q S E K P 5 0 0 0 0 1 1 1 0 0 0 1 0 0 3 5 0 0 0 0 0 0 17 0 1541.7322 Q9UDT6 Q9UDT6 47 63 CLIP2 CAP-Gly domain-containing linker protein 2 yes yes 2 0.007745 59.345 By matching By MS/MS 1 1 67468000 37764000 29703000 4566 2805 5093 11438;11439 10508 10508 5749 1 QSSGSATNVASTPDNR LGRIRTRRQSSGSATN VASTPDNRGRSRAKVV R Q S N R G 2 1 2 1 0 1 0 1 0 0 0 0 0 0 1 4 2 0 0 1 0 0 16 0 1590.7234 Q7Z460;H0Y5T1;F8WA11 Q7Z460 645 660 CLASP1 CLIP-associating protein 1 yes no 2 0.01682 70.622 By MS/MS By matching 1 1 4017100 2200700 1816400 4567 2217 5094 11440;11441 10509 10509 4424;4425;4426 0 QSSLTFQSSDPEQMR GPSFTVMRQSSLTFQS SSDPEQMRQSLLTAIR R Q S M R Q 0 1 0 1 0 3 1 0 0 0 1 0 1 1 1 4 1 0 0 0 0 0 15 0 1739.7785 A0A0X1KG75;A0A0D9SG04;Q53SF7 A0A0X1KG75 1108 1122 COBLL1 Cordon-bleu protein-like 1 yes no 2 0.0020199 74.428 By MS/MS By matching 1 1 7557100 3963400 3593700 4568 317 5095 11442;11443 10510 10510 32 578 1 QSSSSDTDLSLTPK SPSKSYSRQSSSSDTD TDLSLTPKTGMGSGSA R Q S P K T 0 0 0 2 0 1 0 0 0 0 2 1 0 0 1 5 2 0 0 0 0 0 14 0 1464.6944 Q86YS7;H0YFE9 Q86YS7 303 316 C2CD5 C2 domain-containing protein 5 yes no 2 0.00094987 91.969 By matching By MS/MS 2 2 21804000 12265000 9539100 4569 2258 5096;5097 11444;11445;11446;11447 10511;10512 10511 4530 2 QSSVTQVTEQSPK ISASVAVKQSSVTQVT QVTEQSPKVQSRYTKE K Q S P K V 0 0 0 0 0 3 1 0 0 0 0 1 0 0 1 3 2 0 0 2 0 0 13 0 1417.7049 Q14966;A0A096LPH6;C9JWN0 Q14966 118 130 ZNF638 Zinc finger protein 638 yes no 2 0.031303 54.486 By MS/MS By matching 1 1 10971000 5327000 5643800 4570 1961 5098 11448;11449 10513 10513 1 QSVDKVTSPTKV SKRNLWEKQSVDKVTS KVTSPTKV________ K Q S K V - 0 0 0 1 0 1 0 0 0 0 0 2 0 0 1 2 2 0 0 3 0 0 12 2 1287.7034 E7EX44;Q05682 E7EX44 546 557 CALD1 Caldesmon yes no 2 0.010793 94.781 By MS/MS By matching 1 1 143220000 73913000 69304000 4571 753 5099 11450;11451 10514 10514 1378 1 QTDPSTPQQESSKPLGGIQPSSQTIQPK GILATGEKQTDPSTPQ SSQTIQPKVETDAAQA K Q T P K V 0 0 0 1 0 6 1 2 0 2 1 2 0 0 5 5 3 0 0 0 0 0 28 1 2963.4836 Q14004 Q14004 1142 1169 CDK13 Cyclin-dependent kinase 13 yes yes 3 6.8517E-08 77.894 By MS/MS By matching 1 1 22582000 12865000 9716700 4572 1936 5100 11452;11453 10515 10515 3735;6809 1 QTELFAHFIQPAAQKTPTSPLK NRFEYLLKQTELFAHF KTPTSPLKMKPGRPRI K Q T L K M 3 0 0 0 0 3 1 0 1 1 2 2 0 2 3 1 3 0 0 0 0 0 22 1 2452.3114 O60264 O60264 98 119 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 3 1.0876E-08 87.356 By MS/MS By matching 1 1 24571000 14971000 9599100 4573 1400 5101 11454;11455 10516 10516 2570;6619 1 QTELFAHFIQPSAQKSPTSPLNMK KRFEFLLKQTELFAHF PTSPLNMKLGRPRIKK K Q T M K L 2 0 1 0 0 3 1 0 1 1 2 2 1 2 3 3 2 0 0 0 0 0 24 1 2699.3741 A0A0A0MRP6;B7ZLQ5;P28370 A0A0A0MRP6 101 124 SMARCA1 Probable global transcription activator SNF2L1 yes no 3 0.0025286 53.998 By MS/MS By MS/MS 1 2 17107000 6788800 10318000 4574 196 5102;5103 11456;11457;11458 10517;10518 10517 21 356;357;358;6274 2 QTEPVSPVLK AIENCERRQTEPVSPV EPVSPVLKRIKRCLRS R Q T L K R 0 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 1 0 0 2 0 0 10 0 1096.6128 Q8IYH5 Q8IYH5 108 117 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 6.0491E-05 119.17 By MS/MS By MS/MS 1 1 16919000 9765500 7153300 4575 2288 5104 11459;11460 10519;10520 10519 4592 2 QTEPVSPVLKR AIENCERRQTEPVSPV PVSPVLKRIKRCLRSE R Q T K R I 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 1 1 0 0 2 0 0 11 1 1252.7139 Q8IYH5 Q8IYH5 108 118 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.0050888 90.731 By matching By MS/MS 1 1 27919000 14219000 13700000 4576 2288 5105 11461;11462 10521 10521 4592 1 QTETEMLYGSAPR ERQLKNKKQTETEMLY MLYGSAPRTPSKRRGL K Q T P R T 1 1 0 0 0 1 2 1 0 0 1 0 1 0 1 1 2 0 1 0 0 0 13 0 1481.682 G3V3N7;O43663;H0YL53 G3V3N7 74 86 PRC1 Protein regulator of cytokinesis 1 yes no 2 0.00081361 93.442 By MS/MS By MS/MS 1 1 7931000 5083600 2847400 4577 970 5106 11463;11464 10522;10523 10522 1769;7421 1 QTETEMLYGSAPRTPSK ERQLKNKKQTETEMLY SAPRTPSKRRGLAPNT K Q T S K R 1 1 0 0 0 1 2 1 0 0 1 1 1 0 2 2 3 0 1 0 0 0 17 1 1894.9095 G3V3N7;O43663;H0YL53 G3V3N7 74 90 PRC1 Protein regulator of cytokinesis 1 yes no 2;3 3.6231E-07 114.28 By MS/MS By MS/MS 2 2 20220000 11987000 8233700 4578 970 5107 11465;11466;11467;11468 10524;10525;10526;10527 10525 1769;6489;7421 4 QTGGEEGDGASGYDAYWK TRSLKFGRQTGGEEGD SGYDAYWKNLSSDKYG R Q T W K N 2 0 0 2 0 1 2 5 0 0 0 1 0 0 0 1 1 1 2 0 0 0 18 0 1889.7704 Q9Y3S2 Q9Y3S2 238 255 ZNF330 Zinc finger protein 330 yes yes 2 2.4543E-06 101.32 By MS/MS By MS/MS 2 2 20024000 11670000 8354400 4579 2911 5108 11469;11470;11471;11472 10528;10529;10530;10531 10528 7953;7954 4 QTGMTLNER FDINSVGKQTGMTLNE TGMTLNERFGILKEQR K Q T E R F 0 1 1 0 0 1 1 1 0 0 1 0 1 0 0 0 2 0 0 0 0 0 9 0 1048.4971 Q96QD9 Q96QD9 286 294 FYTTD1 UAP56-interacting factor yes yes 2 0.025253 53.124 By MS/MS 1 3339200 3339200 0 4580 2530 5109 11473 10532 10532 0 QTLPSSPTTTK TVNPDRIKQTLPSSPT PSSPTTTKSSPSDPMT K Q T T K S 0 0 0 0 0 1 0 0 0 0 1 1 0 0 2 2 4 0 0 0 0 0 11 0 1159.6085 F8VW64;F8VWX1;F8W659;J3KQU3;P51513 F8VW64 27 37 NOVA1 RNA-binding protein Nova-1 yes no 2 8.5899E-06 137.09 By MS/MS 1 43853000 43853000 0 4581 922 5110 11474 10533 10533 1656 1 QTQTALENEVYCNPK ADLKLQLKQTQTALEN NEVYCNPKQSVIDRSV K Q T P K Q 1 0 2 0 1 2 2 0 0 0 1 1 0 0 1 0 2 0 1 1 0 0 15 0 1793.8254 A6NF31;O75665 A6NF31 408 422 OFD1 Oral-facial-digital syndrome 1 protein yes no 2 0.0069265 80.245 By MS/MS 1 0 0 0 4582 410 5111 11475 10534 10534 7260 1 QTSNPNGPTPQYQTTAR RIGSVTSRQTSNPNGP PQYQTTARVGSPLTLT R Q T A R V 1 1 2 0 0 3 0 1 0 0 0 0 0 0 3 1 4 0 1 0 0 0 17 0 1859.8762 A0A0D9SF60;Q99569 Q99569 295 311 PKP4 Plakophilin-4 no no 2 0.027275 45.825 By MS/MS By matching 1 1 6681400 3399600 3281800 4583 314;2552 5112 11476;11477 10535 10535 7232 1 QTSSFLV ARSEGEFKQTSSFLV_ KQTSSFLV________ K Q T L V - 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 2 1 0 0 1 0 0 7 0 780.40177 A0A087WY82;Q9Y624 A0A087WY82 273 279 F11R Junctional adhesion molecule A yes no 1 0.019188 56.916 By matching By MS/MS 1 1 3353900 1687200 1666700 4584 96 5113 11478;11479 10536 10536 179 1 QTTPESDFNLQALR LEDVVGGRQTTPESDF DFNLQALRSRYEALKK R Q T L R S 1 1 1 1 0 2 1 0 0 0 2 0 0 1 1 1 2 0 0 0 0 0 14 0 1618.7951 Q5VY60;Q7Z4H7 Q5VY60 685 698 HAUS6 HAUS augmin-like complex subunit 6 yes no 2 0.0068137 84.479 By MS/MS By MS/MS 1 1 4561300 2491700 2069700 4585 2122 5114 11480;11481 10537;10538 10538 6894 2 QTVVRTLNATGEEIIQQSSK LQDGIGQRQTVVRTLN EIIQQSSKTDASILQE R Q T S K T 1 1 1 0 0 3 2 1 0 2 1 1 0 0 0 2 3 0 0 2 0 0 20 1 2201.1652 E9PDN5;A0A075B6G3;P11532 E9PDN5 2152 2171 DMD Dystrophin yes no 4 0.0074269 46.131 By matching By MS/MS 1 1 31333000 13239000 18094000 4586 6 5115 11482;11483 10539 10539 12 1 QVAEQGGDLSPAANR RIQVAQEKQVAEQGGD DLSPAANRSQKASQSR K Q V N R S 3 1 1 1 0 2 1 2 0 0 1 0 0 0 1 1 0 0 0 1 0 0 15 0 1511.7328 O94804 O94804 429 443 STK10 Serine/threonine-protein kinase 10 yes yes 2 1.4897E-14 130.47 By MS/MS By MS/MS 1 1 38640000 21776000 16864000 4587 1462 5116 11484;11485 10540;10541 10541 2706 2 QVAGDAPVEQATAETASPVHR SEGATELRQVAGDAPV ETASPVHREEHGRGES R Q V H R E 5 1 0 1 0 2 2 1 1 0 0 0 0 0 2 1 2 0 0 3 0 0 21 0 2133.0451 A0A087X055;Q92766 A0A087X055 373 393 RREB1 Ras-responsive element-binding protein 1 yes no 3 0.00028703 74.63 By MS/MS 1 4894900 0 4894900 4588 124 5117 11486 10542 10542 219;6251 1 QVEYLDLDLDSGK MIKPKGDKQVEYLDLD DLDLDSGKSTPPRKQK K Q V G K S 0 0 0 3 0 1 1 1 0 0 3 1 0 0 0 1 0 0 1 1 0 0 13 0 1493.725 B7Z3B9;Q13480 B7Z3B9 521 533 GAB1 GRB2-associated-binding protein 1 yes no 2 0.0036642 68.786 By MS/MS 1 2275500 2275500 0 4589 513 5118 11487 10543 10543 7300 1 QVGETSAPGDTLDGTPR KENDTGSKQVGETSAP DTLDGTPRTLNTVFDF K Q V P R T 1 1 0 2 0 1 1 3 0 0 1 0 0 0 2 1 3 0 0 1 0 0 17 0 1699.8013 Q9NZN5;E9PMR6 Q9NZN5 689 705 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2 9.0536E-05 102.5 By MS/MS By MS/MS 1 1 51589000 26729000 24860000 4590 2770 5119 11488;11489 10544;10545 10545 7077 2 QVGSISMDLQLTNKALQVMTDFAIQFNR EISGTFTRQVGSISMD DFAIQFNRNSFGLAPA R Q V N R N 2 1 2 2 0 4 0 1 0 2 3 1 2 2 0 2 2 0 0 2 0 0 28 1 3167.6107 Q10567 Q10567 741 768 AP1B1 AP-1 complex subunit beta-1 yes yes 3 0.0091943 44.74 By MS/MS 1 16666000 16666000 0 4591 1874 5120 11490 10546 10546 242 3549;6776 1 QVLLKPQVSEDDDDSDTDEPSPPPASGAATPAR RRPRSRGRQVLLKPQV SGAATPARAHASAAPP R Q V A R A 4 1 0 6 0 2 2 1 0 0 2 1 0 0 6 4 2 0 0 2 0 0 33 1 3404.5856 Q9HAP2 Q9HAP2 19 51 MLXIP MLX-interacting protein yes yes 3 0.0012603 50.492 By matching By MS/MS 1 1 16078000 8720400 7357800 4592 2684 5121 11491;11492 10547 10547 5474;5475 1 QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR DGTVVTIKQVLTAPGS PAPGPCPRSNAMLAVK K Q V P R S 4 2 0 2 1 2 4 4 0 0 2 0 0 0 6 4 1 0 0 1 0 0 33 1 3361.5481 Q8TBB5 Q8TBB5 400 432 KLHDC4 Kelch domain-containing protein 4 yes yes 3 7.094E-05 62.049 By matching By MS/MS 1 1 111630000 60076000 51557000 4593 2372 5122 11493;11494 10548 10548 4749;4750 1 QVNITVQK PVYKLTQRQVNITVQK QVNITVQKKVSQWWER R Q V Q K K 0 0 1 0 0 2 0 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 8 0 928.53418 H3BPZ1;H3BS72;Q9P035 H3BPZ1 52 59 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 2 0.028059 69.998 By MS/MS 1 3019100 3019100 0 4594 1127 5123 11495 10549 10549 0 QVNQISGAHNTSDKQTPSKPK NKKDGFYRQVNQISGA KQTPSKPKKKQNSKGL R Q V P K K 1 0 2 1 0 3 0 1 1 1 0 3 0 0 2 3 2 0 0 1 0 0 21 2 2264.1509 F5GZ90;Q9NZJ0 F5GZ90 139 159 DTL Denticleless protein homolog yes no 3;4 0.0086563 66.201 By matching By MS/MS 1 2 18676000 3790100 14886000 4595 867 5124 11496;11497;11498 10550;10551 10550 1557;6462 2 QVPVMQGTGMQGASIQGGSQPGGFSPGQNQVTPQDHEK AVVPQGSRQVPVMQGT VTPQDHEKAALIMQVL R Q V E K A 1 0 1 1 0 8 1 8 1 1 0 1 2 1 4 3 2 0 0 3 0 0 38 0 3863.7955 E7EWR4;P33240 E7EWR4 520 557 CSTF2 Cleavage stimulation factor subunit 2 yes no 4 0.00067023 47.989 By MS/MS 1 10829000 10829000 0 4596 749 5125 11499 10552 10552 1362 1 QVQQNSLHR QILNDQLKQVQQNSLH VQQNSLHRDSLVTLKR K Q V H R D 0 1 1 0 0 3 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1108.5738 F8W7U0;Q15811;A8CTZ0;CON__ENSEMBL:ENSBTAP00000001528 F8W7U0 554 562 ITSN1 Intersectin-1 no no 2 0.0079234 77.662 By matching By MS/MS 1 1 1783500 545530 1238000 + 4597 939;628 5126 11500;11501 10553 10553 1146 1 QVSITGFFQR AALGKANRQVSITGFF SITGFFQRK_______ R Q V Q R K 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 1 1 0 0 1 0 0 10 0 1181.6193 Q15054;H0YEX7 Q15054 456 465 POLD3 DNA polymerase delta subunit 3 yes no 2 0.0012601 104.82 By MS/MS By MS/MS 1 1 8581500 5440300 3141200 4598 1972 5127 11502;11503 10554;10555 10554 3842 2 QVSITGFFQRK AALGKANRQVSITGFF ITGFFQRK________ R Q V R K - 0 1 0 0 0 2 0 1 0 1 0 1 0 2 0 1 1 0 0 1 0 0 11 1 1309.7143 Q15054;H0YEX7 Q15054 456 466 POLD3 DNA polymerase delta subunit 3 yes no 2 0.0036975 95.094 By MS/MS By MS/MS 1 1 6891000 3991100 2899900 4599 1972 5128 11504;11505 10556;10557 10556 3842 2 QVVESAYEVIK EQWKEVHKQVVESAYE ESAYEVIKLKGYTSWA K Q V I K L 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 1 0 0 1 3 0 0 11 0 1263.6711 P00338 P00338 233 243 LDHA L-lactate dehydrogenase A chain yes yes 2 0.0036952 92.051 By MS/MS By MS/MS 1 1 5133300 2389100 2744200 4600 1509 5129 11506;11507 10558;10559 10558 2 QVVSVVQDEEVGLPFEASPESPPPASPDGVTEIR SEKRRRAKQVVSVVQD PDGVTEIRGLLAQGLR K Q V I R G 2 1 0 2 0 2 5 2 0 1 1 0 0 1 6 4 1 0 0 6 0 0 34 0 3560.7522 Q96TA1 Q96TA1 621 654 FAM129B Niban-like protein 1 yes yes 3 0.0059676 43.795 By MS/MS By matching 1 1 16769000 12202000 4567000 4601 2546 5130 11508;11509 10560 10560 5154;5155 1 QYAGYDYSQQGR GSGGPYSKQYAGYDYS YDYSQQGRFVPPDMMQ K Q Y G R F 1 1 0 1 0 3 0 2 0 0 0 0 0 0 0 1 0 0 3 0 0 0 12 0 1434.6164 Q969M3 Q969M3 38 49 YIPF5 Protein YIPF5 yes yes 2 0.0014348 88.134 By MS/MS By MS/MS 1 1 6371200 2738100 3633000 4602 2452 5131 11510;11511 10561;10562 10561 7831 2 QYATLDVYNPFETR VIQHRPSRQYATLDVY VYNPFETREPPPAYEP R Q Y T R E 1 1 1 1 0 1 1 0 0 0 1 0 0 1 1 0 2 0 2 1 0 0 14 0 1715.8155 O14828 O14828 34 47 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2;3 2.3543E-151 242.97 By MS/MS By MS/MS 3 3 125260000 75980000 49283000 4603 1346 5132;5133 11512;11513;11514;11515;11516;11517 10563;10564;10565;10566;10567;10568 10565 7510;7511 6 QYEQQTYQVIPEVIK KQDLAYERQYEQQTYQ QVIPEVIKNFIQYFHK R Q Y I K N 0 0 0 0 0 4 2 0 0 2 0 1 0 0 1 0 1 0 2 2 0 0 15 0 1864.9571 H7C3A0;C9JHP4;C9K0Q7;B0QY89;Q9Y262 H7C3A0 52 66 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 2;3 5.5434E-15 133.16 By MS/MS By MS/MS 2 2 14717000 7140400 7576700 4604 446 5134 11518;11519;11520;11521 10569;10570;10571 10569 7275 3 RAAAKSPDLSNQNSDQANEEWETASESSDFTSER VTVAPAPRRAAAKSPD SSDFTSERRGDKEAPP R R A E R R 5 2 3 3 0 2 5 0 0 0 1 1 0 1 1 7 2 1 0 0 0 0 34 2 3756.6372 P48634 P48634 1301 1334 PRRC2A Protein PRRC2A yes yes 4 6.3996E-06 63.111 By MS/MS By matching 1 1 7645700 4881500 2764300 4605 1718 5135 11522;11523 10572 10572 3215 1 RAASLNYLNQPSAAPLQVSR RPSSSNMKRAASLNYL AAPLQVSRGLSASTMD K R A S R G 4 2 2 0 0 2 0 0 0 0 3 0 0 0 2 3 0 0 1 1 0 0 20 1 2155.1498 Q9NSK0 Q9NSK0 587 606 KLC4 Kinesin light chain 4 yes yes 3 2.9211E-06 83.992 By MS/MS By MS/MS 1 1 9074100 4943000 4131100 4606 2729 5136 11524;11525 10573;10574 10574 5576 2 RADLNQGIGEPQSPSRR ELSAKLLRRADLNQGI EPQSPSRRVFNPYTEF R R A R R V 1 3 1 1 0 2 1 2 0 1 1 0 0 0 2 2 0 0 0 0 0 0 17 2 1879.9613 Q96C19 Q96C19 62 78 EFHD2 EF-hand domain-containing protein D2 yes yes 3 0.00031578 78.419 By MS/MS By MS/MS 1 1 38585000 20990000 17595000 4607 2465 5137 11526;11527 10575;10576 10575 4964;4965 2 RAELPGSSSPLLAQPR RRPSPFLKRAELPGSS SPLLAQPRKPSGDSQP K R A P R K 2 2 0 0 0 1 1 1 0 0 3 0 0 0 3 3 0 0 0 0 0 0 16 1 1677.9162 Q9C0H5 Q9C0H5 278 293 ARHGAP39 Rho GTPase-activating protein 39 yes yes 3 0.011175 58.848 By MS/MS By MS/MS 1 1 1422100 1422100 0 4608 2621 5138 11528;11529 10577;10578 10578 5323;5324 2 RAGSSGNSCITYQPSVSGEHK RSGSSFSRRAGSSGNS PSVSGEHKAQVTTKAE R R A H K A 1 1 1 0 1 1 1 3 1 1 0 1 0 0 1 5 1 0 1 1 0 0 21 1 2221.0182 A6PW57;Q99755 A6PW57 460 480 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha yes no 3 0.0020907 55.707 By MS/MS By matching 1 1 5935100 3490400 2444700 4609 427 5139 11530;11531 10579 10579 805;806 1 RALPNNTSSSPQPK ELPPGSTKRALPNNTS TSSSPQPKKKPLDGEY K R A P K K 1 1 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 14 1 1495.7743 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 147 160 TP53 Cellular tumor antigen p53 yes no 2;3 0.00085866 91.712 By matching By MS/MS 2 2 64141000 28170000 35971000 4610 118 5140 11532;11533;11534;11535 10580;10581 10581 212;213 2 RALVEFESNPEETREPGSPPSVQR LTSVSRTRRALVEFES GSPPSVQRAGLGSPER R R A Q R A 1 3 1 0 0 1 5 1 0 0 1 0 0 1 4 3 1 0 0 2 0 0 24 2 2710.3311 Q9H6F5;H0YG79 Q9H6F5 30 53 CCDC86 Coiled-coil domain-containing protein 86 yes no 3;4 0.01562 46.595 By MS/MS By matching 2 2 87504000 52904000 34599000 4611 2666 5141 11536;11537;11538;11539 10582;10583 10583 5437 2 RAPSVANVGSHCDLSLK KESITRRRRAPSVANV SHCDLSLKIPEISIQD R R A L K I 2 1 1 1 1 0 0 1 1 0 2 1 0 0 1 3 0 0 0 2 0 0 17 1 1809.9156 Q5HY54;Q60FE5;P21333 Q5HY54 2109 2125 FLNA Filamin-A yes no 3 0.00015926 76.358 By MS/MS By MS/MS 1 1 11392000 6043000 5349100 4612 1613 5142 11540;11541 10584;10585 10585 2980 2 RAQIPEGDYLSYR LGDPGSTRRAQIPEGD EGDYLSYREFHSAGRT R R A Y R E 1 2 0 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 0 13 1 1566.7791 Q96RT1 Q96RT1 1096 1108 ERBB2IP Protein LAP2 yes yes 3 0.00059061 84.173 By MS/MS By MS/MS 1 1 5878500 3698500 2180000 4613 2536 5143 11542;11543 10586;10587 10587 7855 2 RAQSTDSLGTSGSLQSK DMFKDGLRRAQSTDSL TSGSLQSKALGYNYKA R R A S K A 1 1 0 1 0 2 0 2 0 0 2 1 0 0 0 5 2 0 0 0 0 0 17 1 1721.8544 I3L456;Q15276 I3L456 91 107 RABEP1 Rab GTPase-binding effector protein 1 yes no 3 5.8416E-05 82.362 By MS/MS By MS/MS 1 1 5591800 3216100 2375700 4614 1214 5144 11544;11545 10588;10589 10589 2198;2199 2 RASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK PSPPPPVRRASAGPAP STPLGSSKETRKQEKE R R A S K E 4 1 1 0 0 0 1 5 1 0 3 1 0 0 7 6 3 0 0 2 0 0 35 1 3293.7004 Q4KMP7 Q4KMP7 685 719 TBC1D10B TBC1 domain family member 10B yes yes 4 5.7984E-14 84.221 By MS/MS By MS/MS 1 1 23578000 12182000 11396000 4615 2047 5145 11546;11547 10590;10591 10590 4011;6859 2 RASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSKETR PSPPPPVRRASAGPAP LGSSKETRKQEKERQK R R A T R K 4 2 1 0 0 0 2 5 1 0 3 1 0 0 7 6 4 0 0 2 0 0 38 2 3679.8918 Q4KMP7 Q4KMP7 685 722 TBC1D10B TBC1 domain family member 10B yes yes 4 0.00075492 47.674 By MS/MS By MS/MS 1 2 24535000 9240200 15295000 4616 2047 5146;5147 11548;11549;11550 10592;10593 10592 4011;6859 2 RASALIDRPAPYFER GRTQAQTRRASALIDR RPAPYFERSSSKRYTM R R A E R S 3 3 0 1 0 0 1 0 0 1 1 0 0 1 2 1 0 0 1 0 0 0 15 2 1760.9322 A0A0A0MRA8;A0A0A0MSA4;A8K968;J3KT37;A0A1B0GTF8;Q9Y2J2 A0A0A0MRA8 418 432 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 3 0.023192 50.252 By MS/MS By matching 1 1 37114000 18918000 18195000 4617 175;2891 5148 11551;11552 10594 10594 1 RASDTSLTQGIVAFR PVSFREGRRASDTSLT TQGIVAFRQHLQNLAR R R A F R Q 2 2 0 1 0 1 0 1 0 1 1 0 0 1 0 2 2 0 0 1 0 0 15 1 1620.8584 Q9H0K1 Q9H0K1 585 599 SIK2 Serine/threonine-protein kinase SIK2 yes yes 3 0.0001674 89.669 By MS/MS By MS/MS 1 1 4038800 2108800 1930000 4618 2629 5149 11553;11554 10595;10596 10596 5349;5350;7044 2 RASEDTTSGSPPKK QKVEIGQKRASEDTTS TSGSPPKKSSAGPKRD K R A K K S 1 1 0 1 0 0 1 1 0 0 0 2 0 0 2 3 2 0 0 0 0 0 14 2 1459.7267 H0YER7;G3V1C3;Q9BZZ5 H0YER7 270 283 API5 Apoptosis inhibitor 5 yes no 3 0.00018295 109.77 By MS/MS 1 50833000 0 50833000 4619 959 5150 11555 10597 10597 1743;1744 1 RASGLSTEGATGPSADTSGSELDGR PRPRRRSRRASGLSTE SGSELDGRCSLRRGSS R R A G R C 3 2 0 2 0 0 2 5 0 0 2 0 0 0 1 5 3 0 0 0 0 0 25 1 2378.0946 Q7Z628 Q7Z628 19 43 NET1 Neuroepithelial cell-transforming gene 1 protein yes yes 3 0.000746 56.22 By MS/MS 1 16600000 0 16600000 4620 2223 5151 11556 10598 10598 4449 1 RASGQAFELILSPR IQVKELEKRASGQAFE FELILSPRSKESVPEF K R A P R S 2 2 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 14 1 1543.8471 A2A2D0;P16949 A2A2D0 14 27 STMN1 Stathmin yes no 2;3 1.2313E-57 196.62 By MS/MS By MS/MS 5 6 267020000 155530000 111490000 4621 393 5152;5153 11557;11558;11559;11560;11561;11562;11563;11564;11565;11566;11567 10599;10600;10601;10602;10603;10604;10605;10606;10607;10608;10609;10610;10611;10612;10613;10614 10607 752;753 16 RASISEPSDTDPEPR VKSRVRVRRASISEPS SDTDPEPRTLNPSPAG R R A P R T 1 2 0 2 0 0 2 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 15 1 1655.7751 C9JQV3;Q8N1F8 C9JQV3 385 399 STK11IP Serine/threonine-protein kinase 11-interacting protein yes no 2;3 1.0186E-23 147.84 By MS/MS By MS/MS 4 4 96816000 49064000 47752000 4622 603 5154;5155;5156 11568;11569;11570;11571;11572;11573;11574;11575 10615;10616;10617;10618;10619;10620 10618 1095;1096;1097 5 RASLSDIGFGKLETYVK KPLSRMSRRASLSDIG GKLETYVKLDKLGEGT R R A V K L 1 1 0 1 0 0 1 2 0 1 2 2 0 1 0 2 1 0 1 1 0 0 17 2 1883.0153 Q07002;D6R9B0;D6RA44;A0A0A0MSJ6 Q07002 128 144 CDK18 Cyclin-dependent kinase 18 yes no 3 0.0043061 62.303 By MS/MS 1 949140 0 949140 4623 1859 5157 11576 10621 10621 3499;3500 1 RASLSEIGFGK QPMSRRSRRASLSEIG LSEIGFGKMETYIKLE R R A G K M 1 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 0 0 0 11 1 1163.6299 F5H6Z0;Q00537 F5H6Z0 125 135 CDK17 Cyclin-dependent kinase 17 yes no 2 0.00063929 110.55 By MS/MS By MS/MS 1 1 26826000 12354000 14473000 4624 896 5158 11577;11578 10622;10623 10622 1606 2 RASLTLEEK DGLQNKHKRASLTLEE ASLTLEEKQKLAKEQE K R A E K Q 1 1 0 0 0 0 2 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 9 1 1045.5768 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 679 687 SCYL2 SCY1-like protein 2 yes no 2 0.0044213 117.95 By MS/MS By MS/MS 1 1 17600000 10116000 7484600 4625 341 5159 11579;11580 10624;10625 10625 634 2 RASMQPIQIAEGTGITTR GDPQETLRRASMQPIQ EGTGITTRQQRKRVSL R R A T R Q 2 2 0 0 0 2 1 2 0 3 0 0 1 0 1 1 3 0 0 0 0 0 18 1 1929.0102 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1951 1968 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0032324 56.036 By MS/MS 1 1531700 1531700 0 4626 95 5160 11581 10626 10626 175 1 RASPNSDDTVLSPQELQK RARRAVQKRASPNSDD LSPQELQKVLCLVEMS K R A Q K V 1 1 1 2 0 2 1 0 0 0 2 1 0 0 2 3 1 0 0 1 0 0 18 1 1983.9861 Q9UH62 Q9UH62 108 125 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes yes 3 0.0012501 69.922 By MS/MS By MS/MS 1 1 0 0 0 4627 2812 5161 11582;11583 10627;10628 10627 5767;7085 2 RASPSKPASAPASR ADAKAPEKRASPSKPA PASAPASRSGSKSTQT K R A S R S 4 2 0 0 0 0 0 0 0 0 0 1 0 0 3 4 0 0 0 0 0 0 14 2 1381.7426 E7EVA0;P27816;H0Y2V1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 1930 1943 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.025256 51.225 By MS/MS By MS/MS 1 1 119070000 65762000 53308000 4628 742 5162 11584;11585 10629;10630 10629 2 RASPSPPPKR SPPPPPKRRASPSPPP SPSPPPKRRVSHSPPP R R A K R R 1 2 0 0 0 0 0 0 0 0 0 1 0 0 4 2 0 0 0 0 0 0 10 2 1091.62 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 633 642 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2 0.01269 76.073 By MS/MS By matching 1 1 85752000 44187000 41565000 4629 442;1311 5163 11586;11587 10631 10631 845;846 1 RASQEANLLTLAQK IQSTRRRRRASQEANL NLLTLAQKAVELASLQ R R A Q K A 3 1 1 0 0 2 1 0 0 0 3 1 0 0 0 1 1 0 0 0 0 0 14 1 1541.8526 H7C1L3;A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 H7C1L3 281 294 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 2;3 4.8915E-08 122.78 By MS/MS By MS/MS 2 2 24583000 13181000 11402000 4630 225 5164 11588;11589;11590;11591 10632;10633;10634 10633 408 3 RASQGLLSSIENSESDSSEAKEEGSR GRTRYQTRRASQGLLS EAKEEGSRKKRSGKWK R R A S R K 2 2 1 1 0 1 5 2 0 1 2 1 0 0 0 8 0 0 0 0 0 0 26 2 2752.2747 Q5UIP0 Q5UIP0 1540 1565 RIF1 Telomere-associated protein RIF1 yes yes 3 0.0068166 49.001 By matching By MS/MS 1 1 12350000 6457000 5892700 4631 2112 5165 11592;11593 10635 10635 4178 1 RASSKGGGGYTCQSGSGWDEFTK AISVPRVRRASSKGGG SGWDEFTKHVTSECLG R R A T K H 1 1 0 1 1 1 1 6 0 0 0 2 0 1 0 4 2 1 1 0 0 0 23 2 2422.0608 P15924 P15924 163 185 DSP Desmoplakin yes yes 3 0.00039958 60.939 By MS/MS By MS/MS 1 1 18776000 7325700 11450000 4632 1582 5166 11594;11595 10636;10637 10636 2908;6673;7566 2 RASSLNVLNVGGK EPKNPGMKRASSLNVL NVLNVGGKAAEDRFQE K R A G K A 1 1 2 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 2 0 0 13 1 1313.7415 H0YG16;G3V5R9;H0YJK1 H0YG16 228 240 KLC1 yes no 2;3 4.7674E-10 138.05 By MS/MS By MS/MS 2 2 38829000 22252000 16578000 4633 1071 5167 11596;11597;11598;11599 10638;10639;10640 10639 1979;1980 3 RASSPFR PKRKKGEKRASSPFRR KRASSPFRRVREEEIE K R A F R R 1 2 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 7 1 819.43514 A0A0A0MRM9;Q14978 A0A0A0MRM9 629 635 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.026808 66.962 By MS/MS 1 0 0 0 4634 191 5168 11600 10641 10641 1 RASSPFRR PKRKKGEKRASSPFRR RASSPFRRVREEEIEV K R A R R V 1 3 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 0 0 8 2 975.53625 A0A0A0MRM9;Q14978 A0A0A0MRM9 629 636 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 0.021578 63.426 By MS/MS By matching 1 1 12065000 4743800 7321200 4635 191 5169 11601;11602 10642 10642 1 RASVCAEAYNPDEEEDDAESR PVINRFTRRASVCAEA EEDDAESRIIHPKTDD R R A S R I 4 2 1 3 1 0 5 0 0 0 0 0 0 0 1 2 0 0 1 1 0 0 21 1 2411.9772 P31323 P31323 112 132 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit yes yes 3 0.00045837 66.889 By MS/MS By MS/MS 1 1 10369000 5406000 4963400 4636 1657 5170 11603;11604 10643;10644 10643 3059 2 RASWASENGETDAEGTQMTPAK HSPRGTKRRASWASEN GTQMTPAKRPALQDSN R R A A K R 4 1 1 1 0 1 3 2 0 0 0 1 1 0 1 2 3 1 0 0 0 0 22 1 2336.0339 Q12789 Q12789 1863 1884 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.00070473 59.011 By MS/MS By MS/MS 2 1 18861000 13108000 5753000 4637 1876 5171;5172 11605;11606;11607 10645;10646;10647 10646 3553;3554 3 RATPHPSELK AEKRGLQRRATPHPSE TPHPSELKVMKRSIEG R R A L K V 1 1 0 0 0 0 1 0 1 0 1 1 0 0 2 1 1 0 0 0 0 0 10 1 1134.6146 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5 A0A0G2JMS7 392 401 SCRIB Protein scribble homolog yes no 3 0.017914 52.821 By MS/MS By MS/MS 1 1 5938400 2699100 3239300 4638 322 5173 11608;11609 10648;10649 10649 2 RAVSVPASFFR LPRGRRSRRAVSVPAS SVPASFFRRLAPSPAR R R A F R R 2 2 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 0 2 0 0 11 1 1235.6775 O14654 O14654 424 434 IRS4 Insulin receptor substrate 4 yes yes 2;3 1.4374E-05 125.84 By MS/MS By MS/MS 1 2 42464000 22290000 20174000 4639 1343 5174 11610;11611;11612 10650;10651;10652;10653 10650 2435;2436 4 RCNVSDEMKGSK LSLTRDKKRCNVSDEM SDEMKGSKDISSSEMT K R C S K D 0 1 1 1 1 0 1 1 0 0 0 2 1 0 0 2 0 0 0 1 0 0 12 2 1409.6391 Q13023 Q13023 1818 1829 AKAP6 A-kinase anchor protein 6 yes yes 2 0.0097377 78.939 By MS/MS By matching 1 1 8098500 4596500 3502000 4640 1892 5175 11613;11614 10654 10654 248 1 RCPNMAMKEADDDEEVDDNIPEMPSPK SKQACQERRCPNMAMK IPEMPSPKKMHQGKKK R R C P K K 2 1 2 5 1 0 4 0 0 1 0 2 3 0 4 1 0 0 0 1 0 0 27 2 3132.3144 P26358 P26358 690 716 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 3 0.0011614 56.977 By MS/MS 1 5070400 0 5070400 4641 1634 5176 11615 10655 10655 3021 1 RCQTAEADSESDHEVPEPESEMK TVSARTNRRCQTAEAD PEPESEMKMRLPRRAK R R C M K M 2 1 0 2 1 1 6 0 1 0 0 1 1 0 2 3 1 0 0 1 0 0 23 1 2660.0966 Q9BPX3 Q9BPX3 965 987 NCAPG Condensin complex subunit 3 yes yes 3 0.030892 40.454 By MS/MS 1 0 0 0 4642 2567 5177 11616 10656 10656 1 RDGPGLERSPGEPGGAAPER EPLRKRPRRDGPGLER PGGAAPEREVPAAARG R R D E R E 2 3 0 1 0 0 3 5 0 0 1 0 0 0 4 1 0 0 0 0 0 0 20 2 2003.9773 Q96EB6 Q96EB6 39 58 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 3 0.002149 65.265 By matching By MS/MS 1 1 41713000 22587000 19126000 4643 2477 5178 11617;11618 10657 10657 4997 1 RDLAEEIVMYMNNMSSPLTSRTPSIDLQR SISTPSARRDLAEEIV TPSIDLQRACDDKLNK R R D Q R A 1 3 2 2 0 1 2 0 0 2 3 0 3 0 2 4 2 0 1 1 0 0 29 2 3366.637 A0A0U1RR27;Q7Z401 A0A0U1RR27 1246 1274 DENND4A C-myc promoter-binding protein yes no 3 0.027045 41.423 By MS/MS 1 0 0 0 4644 347 5179 11619 10658 10658 1 RDNTNEIYSGK CGQCVCRKRDNTNEIY TNEIYSGKFCECDNFN K R D G K F 0 1 2 1 0 0 1 1 0 1 0 1 0 0 0 1 1 0 1 0 0 0 11 1 1295.6106 P05556;H7C4N8 P05556 541 551 ITGB1 Integrin beta-1 yes no 2 0.023072 45.653 By MS/MS By matching 1 1 3287400 1593900 1693600 4645 1527 5180 11620;11621 10659 10659 7547 0 RDQEGSVGPSDFGPR HSDSLPRRRDQEGSVG GPSDFGPRSIDPTLTR R R D P R S 0 2 0 2 0 1 1 3 0 0 0 0 0 1 2 2 0 0 0 1 0 0 15 1 1602.7386 C9JDF5;A0A0C4DG26;Q9NP71 C9JDF5 66 80 MLXIPL Carbohydrate-responsive element-binding protein yes no 3 0.014288 46.746 By matching By MS/MS 1 1 19624000 9581300 10043000 4646 276 5181 11622;11623 10660 10660 494 1 RDSDGVDGFEAEGK IHNNRKRRRDSDGVDG DGFEAEGKKDKKDYDN R R D G K K 1 1 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1480.643 Q96KR1 Q96KR1 1052 1065 ZFR Zinc finger RNA-binding protein yes yes 2;3 1.5105E-14 146.18 By MS/MS By MS/MS 1 3 58627000 25091000 33536000 4647 2513 5182 11624;11625;11626;11627 10661;10662;10663 10662 5075 3 RDSFDDRGPSLNPVLDYDHGSR WEEKRHFRRDSFDDRG LDYDHGSRSQESGYYD R R D S R S 0 3 1 5 0 0 0 2 1 0 2 0 0 1 2 3 0 0 1 1 0 0 22 2 2517.1633 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 186 207 MATR3 Matrin-3 yes no 3;4 6.1904E-14 111.82 By MS/MS By MS/MS 2 2 505010000 153610000 351410000 4648 333 5183 11628;11629;11630;11631 10664;10665;10666;10667 10665 620;621 4 RDSFDNCSLGESSK NAIKRLHKRDSFDNCS CSLGESSKIGISDISS K R D S K I 0 1 1 2 1 0 1 1 0 0 1 1 0 1 0 4 0 0 0 0 0 0 14 1 1600.6787 Q5UIP0 Q5UIP0 1686 1699 RIF1 Telomere-associated protein RIF1 yes yes 2;3 0.0014096 105 By MS/MS By MS/MS 2 3 120540000 63779000 56758000 4649 2112 5184 11632;11633;11634;11635;11636 10668;10669;10670 10669 4176 3 RDSFLAQTK MERKSNGKRDSFLAQT DSFLAQTKNKKENMKP K R D T K N 1 1 0 1 0 1 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 9 1 1064.5615 Q5UIP0 Q5UIP0 1006 1014 RIF1 Telomere-associated protein RIF1 yes yes 2 0.003858 124.39 By MS/MS By MS/MS 1 1 5277900 2741200 2536800 4650 2112 5185 11637;11638 10671;10672 10672 4179 2 RDSGVGSGLEAQESWER RIPRPGQRRDSGVGSG EAQESWERLSDGGKAG R R D E R L 1 2 0 1 0 1 3 3 0 0 1 0 0 0 0 3 0 1 0 1 0 0 17 1 1861.8555 A0A0A0MTG6;Q12770 A0A0A0MTG6 446 462 SCAP Sterol regulatory element-binding protein cleavage-activating protein yes no 2;3 0.001072 77.593 By MS/MS By MS/MS 2 1 15133000 9720000 5413000 4651 245 5186 11639;11640;11641 10673;10674 10674 446;447 2 RDSLTGSSDLYK SNTGSGSRRDSLTGSS TGSSDLYKRTSSSLTP R R D Y K R 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 0 0 12 1 1340.6572 Q5T1Z4;Q5T1Z8;Q14671;E9PR38;H0YDK8 Q5T1Z4 708 719 PUM1 Pumilio homolog 1 yes no 2;3 1.3775E-08 132.51 By MS/MS By MS/MS 2 2 68424000 34687000 33737000 4652 1950 5187 11642;11643;11644;11645 10675;10676;10677;10678 10677 3764 4 RDSLTGSSDLYKR SNTGSGSRRDSLTGSS GSSDLYKRTSSSLTPI R R D K R T 0 2 0 2 0 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 0 0 13 2 1496.7583 Q5T1Z4;Q5T1Z8;Q14671;E9PR38;H0YDK8 Q5T1Z4 708 720 PUM1 Pumilio homolog 1 yes no 2;3 0.0005498 109.07 By MS/MS By MS/MS 2 2 91563000 45204000 46359000 4653 1950 5188 11646;11647;11648;11649 10679;10680;10681;10682 10680 3764 2 RDSLTSPEDELGAEVGDEAGDKK RSSASELRRDSLTSPE GDEAGDKKSPWQRREE R R D K K S 2 1 0 4 0 0 4 3 0 0 2 2 0 0 1 2 1 0 0 1 0 0 23 2 2417.1194 A8MVW0 A8MVW0 787 809 FAM171A2 Protein FAM171A2 yes yes 3 0.0014034 54.12 By MS/MS By matching 1 1 6136300 4296800 1839400 4654 434 5189 11650;11651 10683 10683 824;825;6331 0 RDSPPPPAR VTRSNSLRRDSPPPPA DSPPPPARARQENGMP R R D A R A 1 2 0 1 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 9 1 991.51993 O96013;M0R2X4 O96013 102 110 PAK4 Serine/threonine-protein kinase PAK 4 yes no 3 0.0049541 66.538 By MS/MS By MS/MS 1 1 5348000 2563600 2784400 4655 1506 5190 11652;11653 10684;10685 10685 2793 2 RDSSDDWEIPDGQITVGQR NRMKTLGRRDSSDDWE GQITVGQRIGSGSFGT R R D Q R I 0 2 0 4 0 2 1 2 0 2 0 0 0 0 1 2 1 1 0 1 0 0 19 1 2173.0036 P15056;H7C560 P15056 444 462 BRAF Serine/threonine-protein kinase B-raf yes no 2;3 0.0011442 70.373 By MS/MS By MS/MS 2 2 75840000 44262000 31578000 4656 1581 5191 11654;11655;11656;11657 10686;10687;10688;10689 10689 2901;2902 4 RDSSESQLASTESDKPTTGR PCLLMELRRDSSESQL SDKPTTGRVYESDSSN R R D G R V 1 2 0 2 0 1 2 1 0 0 1 1 0 0 1 5 3 0 0 0 0 0 20 2 2151.004 A0A087WVF1;Q5BIX2;Q96B23;K7EQH1 A0A087WVF1 64 83 C18orf25;ARKL1 Uncharacterized protein C18orf25 yes no 3 6.3187E-19 127.16 By MS/MS By MS/MS 1 1 80842000 46789000 34053000 4657 62 5192 11658;11659 10690;10691 10690 109 2 REEGPPPPSPDGASSDAEPEPPSGR TQPSTARRREEGPPPP EPEPPSGRTESPATAA R R E G R T 2 2 0 2 0 0 4 3 0 0 0 0 0 0 8 4 0 0 0 0 0 0 25 1 2514.1259 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 14 38 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 3.6204E-05 69.913 By MS/MS By MS/MS 1 1 14105000 7591500 6513700 4658 542 5193 11660;11661 10692;10693 10693 991 2 REEGSDIEDEDMEELLNDTR KKMNEKRKREEGSDIE EELLNDTRLLKKLKKG K R E T R L 0 2 1 4 0 0 6 1 0 1 2 0 1 0 0 1 1 0 0 0 0 0 20 1 2394.0129 F5H5U2;Q8NHQ9 F5H5U2 509 528 DDX55 ATP-dependent RNA helicase DDX55 yes no 3 7.7305E-06 81.974 By MS/MS By MS/MS 1 1 6665800 3782000 2883800 4659 890 5194 11662;11663 10694;10695 10694 1597 2 REEQTDTSDGESVTHHIR SRSGSRERREEQTDTS ESVTHHIRRLNQQPSQ R R E I R R 0 2 0 2 0 1 3 1 2 1 0 0 0 0 0 2 3 0 0 1 0 0 18 1 2095.9519 A2AB27;P36915 A2AB27 42 59 GNL1 Guanine nucleotide-binding protein-like 1 yes no 4 0.0014996 63.894 By MS/MS 1 25298000 0 25298000 4660 397 5195 11664 10696 10696 765 1 REFITGDVEPTDAESEWHSENEEEEKLAGDMK YQPLFDKRREFITGDV EKLAGDMKSK______ R R E M K S 2 1 1 3 0 0 9 2 1 1 1 2 1 1 1 2 2 1 0 1 0 0 32 2 3706.6217 E9PNJ7;A8MXH2;E9PKT8;C9J6D1;C9JZI7;Q99733 E9PNJ7 107 138 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 4 0.0020867 47.919 By MS/MS By MS/MS 2 2 45716000 27935000 17781000 4661 439 5196;5197 11665;11666;11667;11668 10697;10698;10699 10698 49 828;829;6332 3 RESESESDETPPAAPQLIK AAKTAKRKRESESESD PAAPQLIKKEKKKSKK K R E I K K 2 1 0 1 0 1 4 0 0 1 1 1 0 0 3 3 1 0 0 0 0 0 19 1 2083.0069 O60832 O60832 449 467 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 9.8687E-07 92.805 By MS/MS By matching 1 1 5982100 3121000 2861100 4662 1423 5198 11669;11670 10700 10700 2622;2623;2624 1 RESLSYIPK DAGFSVRRRESLSYIP ESLSYIPKGLVRNSIS R R E P K G 0 1 0 0 0 0 1 0 0 1 1 1 0 0 1 2 0 0 1 0 0 0 9 1 1091.5975 A1L390;G3V311 A1L390 739 747 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.016348 79.07 By MS/MS By matching 1 1 3650500 2230300 1420200 4663 391 5199 11671;11672 10701 10701 748 1 RESPESEGPIYEGLIL TLEHLRLRRESPESEG PIYEGLIL________ R R E I L - 0 1 0 0 0 0 4 2 0 2 2 0 0 0 2 2 0 0 1 0 0 0 16 1 1787.8941 Q96QK1 Q96QK1 781 796 VPS35 Vacuolar protein sorting-associated protein 35 yes yes 2 0.00052173 105.65 By MS/MS By MS/MS 1 1 14354000 7228100 7125600 4664 2532 5200 11673;11674 10702;10703 10703 7854 2 RESPSPAPKPR TKHKGTEKRESPSPAP PSPAPKPRKVELSESE K R E P R K 1 2 0 0 0 0 1 0 0 0 0 1 0 0 4 2 0 0 0 0 0 0 11 2 1220.6626 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 443 453 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2;3 0.0023017 85.287 By MS/MS By MS/MS 2 2 416950000 247750000 169200000 4665 442;1311 5201;5202 11675;11676;11677;11678 10704;10705;10706 10705 847 3 REVSPAPAVAGQSK RSHHADRRREVSPAPA PAVAGQSKGYRPKLYS R R E S K G 3 1 0 0 0 1 1 1 0 0 0 1 0 0 2 2 0 0 0 2 0 0 14 1 1395.747 O60292 O60292 1361 1374 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 yes yes 2 0.020466 63.681 By matching By MS/MS 1 1 4496400 2793100 1703300 4666 1401 5203 11679;11680 10707 10707 2571 1 RFDDAVVQSDMK DAKRLIGRRFDDAVVQ AVVQSDMKHWPFMVVN R R F M K H 1 1 0 3 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 0 12 1 1409.6609 P11142;E9PKE3;E9PN89;E9PNE6;E9PQQ4;E9PQK7;E9PLF4;E9PPY6;E9PN25;E9PK54 P11142 77 88 HSPA8 Heat shock cognate 71 kDa protein no no 3 0.0056357 59.227 By MS/MS By MS/MS 1 1 4021500 2750000 1271500 4667 1560;812 5204 11681;11682 10708;10709 10709 2 RFSDFLGLYEK SKQFAVKRRFSDFLGL DFLGLYEKLSEKHSQN R R F E K L 0 1 0 1 0 0 1 1 0 0 2 1 0 2 0 1 0 0 1 0 0 0 11 1 1373.698 Q13596 Q13596 186 196 SNX1 Sorting nexin-1 yes yes 2 0.0047021 91.812 By MS/MS By MS/MS 1 1 5433400 3549700 1883800 4668 1928 5205 11683;11684 10710;10711 10710 3723 2 RFSDQAGPAIPTSNSYSK VSANPKQRRFSDQAGP PTSNSYSKKTQSNNAE R R F S K K 2 1 1 1 0 1 0 1 0 1 0 1 0 1 2 4 1 0 1 0 0 0 18 1 1924.9279 E7ETY4;E9PC69 E7ETY4 374 391 MARK2 yes no 2;3 0.0013511 63.522 By MS/MS By MS/MS 2 2 29644000 16460000 13184000 4669 738 5206 11685;11686;11687;11688 10712;10713;10714 10714 1326;1327;1328;6426 3 RFSDSEGEETVPEPR GGCAGSRRRFSDSEGE EETVPEPRLPLLDHQG R R F P R L 0 2 0 1 0 0 4 1 0 0 0 0 0 1 2 2 1 0 0 1 0 0 15 1 1733.7857 A0A1B0GWH8;H3BPL0;A0A0D9SF04;Q9UBH5;Q9UP10;H3BR00;O95090;H3BR84;H3BQ48;Q9UBD8;A0A1B0GV41;A0A0D9SFH9;A0A1B0GW34;A0A1B0GV71;A0A0A0MRC7;A0A1B0GWD3;A0A024QZB8;Q13286 A0A1B0GWH8 10 24 CLN3 Battenin yes no 2 0.0029475 76.341 By MS/MS 1 0 0 0 4670 0 5207 11689 10715 10715 0;1 1 RFSEGVLQSPSQDQEK RPTSLVQRRFSEGVLQ SPSQDQEKLGGSLAAL R R F E K L 0 1 0 1 0 3 2 1 0 0 1 1 0 1 1 3 0 0 0 1 0 0 16 1 1833.8857 Q9C0C2 Q9C0C2 427 442 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2;3 0.00025795 106.32 By MS/MS By MS/MS 2 2 23863000 10822000 13041000 4671 2615 5208 11690;11691;11692;11693 10716;10717;10718;10719 10718 5297;5298 4 RFSLSPSLGPQASR LSPCPPQRRFSLSPSL SLGPQASRFLPSARSS R R F S R F 1 2 0 0 0 1 0 1 0 0 2 0 0 1 2 4 0 0 0 0 0 0 14 1 1501.8001 Q9NYF3 Q9NYF3 230 243 FAM53C Protein FAM53C yes yes 2;3 0.00069729 99.238 By MS/MS By MS/MS 2 2 33323000 18583000 14740000 4672 2757 5209 11694;11695;11696;11697 10720;10721;10722 10721 5636;5637;5638 3 RFSMEDVSK FQRRQNQRRFSMEDVS FSMEDVSKRLSLPMDI R R F S K R 0 1 0 1 0 0 1 0 0 0 0 1 1 1 0 2 0 0 0 1 0 0 9 1 1097.5175 Q07002 Q07002 85 93 CDK18 Cyclin-dependent kinase 18 yes yes 2 0.0071128 103.43 By MS/MS By MS/MS 1 1 24288000 12847000 11441000 4673 1859 5210 11698;11699 10723;10724 10723 3501 2 RFSPSQVPIQTR VDSLPRLRRFSPSQVP SQVPIQTRSFVCFGDD R R F T R S 0 2 0 0 0 2 0 0 0 1 0 0 0 1 2 2 1 0 0 1 0 0 12 1 1414.7681 Q08AD1 Q08AD1 1017 1028 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 3 0.015236 49.265 By MS/MS By MS/MS 1 1 6674100 3430800 3243300 4674 1868 5211 11700;11701 10725;10726 10726 3517;3518 2 RFSTEEFVLL EDEKKQLKRFSTEEFV STEEFVLL________ K R F L L - 0 1 0 0 0 0 2 0 0 0 2 0 0 2 0 1 1 0 0 1 0 0 10 1 1239.6499 Q96DT6 Q96DT6 449 458 ATG4C Cysteine protease ATG4C yes yes 2 0.021093 69.01 By MS/MS By MS/MS 1 1 2568300 1287000 1281300 4675 2475 5212 11702;11703 10727;10728 10727 4986 0 RFVSEGDGGR LCPSRGRKRFVSEGDG VSEGDGGRLKPESY__ K R F G R L 0 2 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 1 0 0 10 1 1078.5156 Q53EL6 Q53EL6 454 463 PDCD4 Programmed cell death protein 4 yes yes 2 0.0055188 87.831 By MS/MS By matching 1 1 17263000 8719600 8543300 4676 2053 5213 11704;11705 10729 10729 4034 1 RGAPSSPATGVLPSPQGK SSLSRYFRRGAPSSPA VLPSPQGKSTSLSKAS R R G G K S 2 1 0 0 0 1 0 3 0 0 1 1 0 0 4 3 1 0 0 1 0 0 18 1 1705.9111 Q5SRE5 Q5SRE5 1704 1721 NUP188 Nucleoporin NUP188 homolog yes yes 2;3 0.0002396 76.704 By MS/MS By MS/MS 3 4 24079000 12925000 11154000 4677 2087 5214;5215 11706;11707;11708;11709;11710;11711;11712 10730;10731;10732;10733;10734;10735 10733 4113;4114;4115;6873 6 RGASGSIFSK PSGHSQGRRGASGSIF ASGSIFSKFTSKFVRR R R G S K F 1 1 0 0 0 0 0 2 0 1 0 1 0 1 0 3 0 0 0 0 0 0 10 1 1008.5352 E7ETY4;E9PC69;Q7KZI7 E7ETY4 548 557 MARK2 Serine/threonine-protein kinase MARK2 yes no 2 0.015696 74.537 By MS/MS 1 3538800 3538800 0 4678 738 5216 11713 10736 10736 1329 1 RGESLDNLDSPR VSLPGIMRRGESLDNL LDNLDSPRSNSWRQPP R R G P R S 0 2 1 2 0 0 1 1 0 0 2 0 0 0 1 2 0 0 0 0 0 0 12 1 1357.6586 E9PMS6;A0A0A0MTE2;E9PMT2;F8WD26;J3KP06;Q8WWI1 E9PMS6 1099 1110 LMO7 LIM domain only protein 7 yes no 2 0.0085843 78.814 By MS/MS By matching 1 1 20455000 11368000 9087800 4679 243 5217 11714;11715 10737 10737 441 1 RGFSDSGGGPPAK GRGSLLLRRGFSDSGG SGGGPPAKQRDLEGAV R R G A K Q 1 1 0 1 0 0 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 13 1 1231.5945 Q9H307;G3V5F0;G3V579 Q9H307 63 75 PNN Pinin yes no 2;3 0.00090329 109.99 By MS/MS By MS/MS 1 3 81450000 40666000 40784000 4680 2651 5218 11716;11717;11718;11719 10738;10739;10740;10741 10739 5404 4 RGFSDSGGGPPAKQR GRGSLLLRRGFSDSGG GGPPAKQRDLEGAVSR R R G Q R D 1 2 0 1 0 1 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 15 2 1515.7542 Q9H307;G3V5F0;G3V579 Q9H307 63 77 PNN Pinin yes no 3 0.0043754 64.331 By MS/MS By matching 1 1 12103000 5756500 6346800 4681 2651 5219 11720;11721 10742 10742 5404 1 RGGGSGGGEESEGEEVDED QRDKLYERRGGGSGGG EGEEVDED________ R R G E D - 0 1 0 2 0 0 6 7 0 0 0 0 0 0 0 2 0 0 0 1 0 0 19 1 1850.7038 Q96QR8 Q96QR8 294 312 PURB Transcriptional activator protein Pur-beta yes yes 2 9.1527E-06 85.203 By MS/MS By MS/MS 3 2 33855000 19620000 14235000 4682 2533 5220 11722;11723;11724;11725;11726 10743;10744;10745;10746;10747;10748;10749;10750 10750 5109 8 RGIAIAYEDEGSG VTEAVSGRRGIAIAYE AYEDEGSG________ R R G S G - 2 1 0 1 0 0 2 3 0 2 0 0 0 0 0 1 0 0 1 0 0 0 13 1 1336.6259 H0YCR5;Q9BQC3 H0YCR5 250 262 DPH2 Diphthamide biosynthesis protein 2 yes no 2 0.0028667 101.38 By MS/MS 1 3731500 0 3731500 4683 1061 5221 11727 10751 10751 1966 1 RGLGAGAGAGEESPATSLPR RLWVRWGRRGLGAGAG SPATSLPRMKKRDFSL R R G P R M 4 2 0 0 0 0 2 5 0 0 2 0 0 0 2 2 1 0 0 0 0 0 20 1 1852.9391 O15173 O15173 78 97 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 3 0.00082151 65.428 By MS/MS 1 3296600 3296600 0 4684 1363 5222 11728 10752 10752 2492;6603 1 RGLLYDSDEEDEERPAR GRGLGRMRRGLLYDSD EDEERPARKRRQVERA R R G A R K 1 3 0 3 0 0 4 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 17 2 2048.9399 P49736 P49736 133 149 MCM2 DNA replication licensing factor MCM2 yes yes 4 0.020043 40.952 By MS/MS 1 8256300 0 8256300 4685 1726 5223 11729 10753 10753 3237 1 RGNDPLTSSPGR ASSPAQRRRGNDPLTS PLTSSPGRSSRRTDAL R R G G R S 0 2 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 12 1 1255.6269 P49736;C9J013;C9JZ21;F8WDM3 P49736 19 30 MCM2 DNA replication licensing factor MCM2 yes no 2 3.3625E-48 195.72 By MS/MS By MS/MS 1 1 354890000 183440000 171450000 4686 1726 5224 11730;11731 10754;10755 10755 3238;3239 2 RGPLPIPKSSPDDPNYSLVDDYSLLYQ ATGPNLARRGPLPIPK DDYSLLYQ________ R R G Y Q - 0 1 1 4 0 1 0 1 0 1 4 1 0 0 5 4 0 0 3 1 0 0 27 2 3048.508 Q9H939 Q9H939 308 334 PSTPIP2 Proline-serine-threonine phosphatase-interacting protein 2 yes yes 3 0.0091209 41.166 By MS/MS By matching 1 1 11851000 8591400 3259600 4687 2682 5225 11732;11733 10756 10756 5471;5472;7895 1 RGPNYTSGYGTNSELSNPSETESER YSGRGRGRRGPNYTSG PSETESERKDELSDWS R R G E R K 0 2 3 0 0 0 4 3 0 0 1 0 0 0 2 5 3 0 2 0 0 0 25 1 2731.1958 E7EU85;E9PFF5;B4DXZ6;P51114 E7EU85 306 330 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 3 0.0098698 41.483 By MS/MS 1 4101700 0 4101700 4688 497 5226 11734 10757 10757 934;935 1 RGPPPPRSR KPAFESSRRGPPPPRS GPPPPRSRGRPRFLRG R R G S R G 0 3 0 0 0 0 0 1 0 0 0 0 0 0 4 1 0 0 0 0 0 0 9 2 1018.5784 O75526 O75526 94 102 RBMXL2 RNA-binding motif protein, X-linked-like-2 yes yes 3 0.014499 65.224 By MS/MS 1 2211700 0 2211700 4689 1442 5227 11735 10758 10758 2666 1 RGSASGSEPAGDSDR LGEEPKQRRGSASGSE EPAGDSDRG_______ R R G D R G 2 2 0 2 0 0 1 3 0 0 0 0 0 0 1 4 0 0 0 0 0 0 15 1 1447.6288 A0A0C4DG27;P50747 A0A0C4DG27 77 91 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase yes no 2 0.012815 64.588 By MS/MS By matching 1 1 9827500 5200300 4627200 4690 277 5228 11736;11737 10759 10759 495 1 RGSDASDFDLLETQSACSDTSESSAAGGQGNSR AGSRASSRRGSDASDF AGGQGNSRRGLNKPSK R R G S R R 4 2 1 4 1 2 2 4 0 0 2 0 0 1 0 8 2 0 0 0 0 0 33 1 3362.4189 H0Y390;H3BPE1;H3BQK9;Q9UPN3;H0Y314;H0Y6T5;H0Y4F5 H0Y390 4374 4406 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 3 0.00046937 50.88 By MS/MS 1 9601400 0 9601400 4691 1011 5229 11738 10760 10760 1862 1 RGSFSSENYWR VLLPTHRRRGSFSSEN FSSENYWRKSYESSED R R G W R K 0 2 1 0 0 0 1 1 0 0 0 0 0 1 0 3 0 1 1 0 0 0 11 1 1387.6269 K7ER58;Q6P6C2 K7ER58 18 28 ALKBH5 RNA demethylase ALKBH5 yes no 2;3 4.0532E-21 178.67 By MS/MS By MS/MS 2 2 73758000 6615600 67143000 4692 1287 5230 11739;11740;11741;11742 10761;10762;10763;10764 10763 2319 4 RGSFSSENYWRK VLLPTHRRRGSFSSEN SSENYWRKSYESSEDC R R G R K S 0 2 1 0 0 0 1 1 0 0 0 1 0 1 0 3 0 1 1 0 0 0 12 2 1515.7219 K7ER58;Q6P6C2 K7ER58 18 29 ALKBH5 RNA demethylase ALKBH5 yes no 3 0.0027031 79.804 By MS/MS 1 1993500 0 1993500 4693 1287 5231 11743 10765 10765 2319 1 RGSGDTSSLIDPDTSLSELR PLSGNSSRRGSGDTSS DTSLSELRDIYDLKDQ R R G L R D 0 2 0 3 0 0 1 2 0 1 3 0 0 0 1 5 2 0 0 0 0 0 20 1 2105.0237 C9JSU1;Q9Y608 C9JSU1 94 113 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2;3 4.4219E-09 102.07 By MS/MS By MS/MS 2 2 100060000 46464000 53594000 4694 608 5232 11744;11745;11746;11747 10766;10767;10768 10767 1113;6381 3 RGSGSALGGPLDPQFVGPSDTSLGAAPGHR SEPGLLARRGSGSALG LGAAPGHRVLPCGPSP R R G H R V 3 2 0 2 0 1 0 7 1 0 3 0 0 1 4 4 1 0 0 1 0 0 30 1 2860.4216 P98174 P98174 46 75 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 3;4 1.2688E-22 94.031 By MS/MS By MS/MS 2 2 21890000 11163000 10726000 4695 1822 5233 11748;11749;11750;11751 10769;10770;10771 10769 3408;3409 3 RGSIGENQIKDEK EEEEEKPKRGSIGENQ ENQIKDEKIKKDKEPK K R G E K I 0 1 1 1 0 1 2 2 0 2 0 2 0 0 0 1 0 0 0 0 0 0 13 2 1472.7583 C9J813;E9PGZ1 C9J813 200 212 CALD1 yes no 2;3 8.492E-11 129.42 By MS/MS By MS/MS 2 2 44492000 22321000 22171000 4696 567 5234 11752;11753;11754;11755 10772;10773;10774 10772 1046 3 RGSLEMSSDGEPLSR SSATSGGRRGSLEMSS SDGEPLSRMDSEDSIS R R G S R M 0 2 0 1 0 0 2 2 0 0 2 0 1 0 1 4 0 0 0 0 0 0 15 1 1619.7573 Q6ZN18 Q6ZN18 204 218 AEBP2 Zinc finger protein AEBP2 yes yes 3 0.00036592 80.733 By MS/MS By MS/MS 1 1 8784200 4607100 4177000 4697 2178 5235 11756;11757 10775;10776 10775 4354 2 RGSLSNAGDPEIVK DESEEEGRRGSLSNAG AGDPEIVKSPSDPKQY R R G V K S 1 1 1 1 0 0 1 2 0 1 1 1 0 0 1 2 0 0 0 1 0 0 14 1 1441.7525 F5H7V1;B1AKJ5;O43847 F5H7V1 92 105 NRD1 Nardilysin yes no 2;3 0.00092986 96.773 By MS/MS By MS/MS 2 1 57169000 32515000 24654000 4698 456 5236 11758;11759;11760 10777;10778;10779 10778 884 3 RGSLSNAGDPEIVKSPSDPK DESEEEGRRGSLSNAG VKSPSDPKQYRYIKLQ R R G P K Q 1 1 1 2 0 0 1 2 0 1 1 2 0 0 3 4 0 0 0 1 0 0 20 2 2053.044 F5H7V1;B1AKJ5;O43847 F5H7V1 92 111 NRD1 Nardilysin yes no 3 0.0081586 53.958 By MS/MS By MS/MS 1 1 9467500 4898600 4568800 4699 456 5237 11761;11762 10780;10781 10780 884 2 RGSLSQEMAKGEEK SRRLCENRRGSLSQEM EMAKGEEKLAANTLST R R G E K L 1 1 0 0 0 1 3 2 0 0 1 2 1 0 0 2 0 0 0 0 0 0 14 2 1548.7566 Q8NFC6 Q8NFC6 1075 1088 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2;3 6.3586E-05 112.74 By MS/MS By MS/MS 2 2 33372000 18187000 15185000 4700 2353 5238 11763;11764;11765;11766 10782;10783;10784 10783 4716 3 RGSPTTGFIEQK PTPGFSTRRGSPTTGF TTGFIEQKGSPTSAYP R R G Q K G 0 1 0 0 0 1 1 2 0 1 0 1 0 1 1 1 2 0 0 0 0 0 12 1 1319.6834 J3KPS2;Q6ZRV2 J3KPS2 617 628 FAM83H Protein FAM83H yes no 2 5.5107E-09 144.8 By MS/MS 1 9002300 9002300 0 4701 1231 5239 11767 10785 10785 2229 1 RGSPVPPVPERR PTSAYPERRGSPVPPV VPPVPERRSSPVPPVP R R G R R S 0 3 0 0 0 0 1 1 0 0 0 0 0 0 4 1 0 0 0 2 0 0 12 2 1345.7579 J3KPS2;Q6ZRV2 J3KPS2 639 650 FAM83H Protein FAM83H yes no 3 0.0037335 72.523 By MS/MS By MS/MS 1 1 0 0 0 4702 1231 5240 11768;11769 10786;10787 10787 2230 2 RGSSGSVDETLFALPAASEPVIR STPAAPKRRGSSGSVD AASEPVIRSSAENMDL R R G I R S 3 2 0 1 0 0 2 2 0 1 2 0 0 1 2 4 1 0 0 2 0 0 23 1 2358.2179 Q9NQC3 Q9NQC3 179 201 RTN4 Reticulon-4 yes yes 3 0.00025456 64.583 By MS/MS By MS/MS 2 2 18426000 9820400 8605600 4703 2707 5241;5242 11770;11771;11772;11773 10788;10789;10790;10791 10788 5519;5520;5521 4 RGSSPGSLEIPK GNASTMTRRGSSPGSL PGSLEIPKDLPDILNK R R G P K D 0 1 0 0 0 0 1 2 0 1 1 1 0 0 2 3 0 0 0 0 0 0 12 1 1226.6619 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 1317 1328 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 2 0.0081762 67.952 By MS/MS By MS/MS 2 2 16611000 8785700 7825600 4704 371 5243;5244 11774;11775;11776;11777 10792;10793 10793 699;700 1 RGSVRGTSAADV KELETMRKRGSVRGTS RGTSAADV________ K R G D V - 2 2 0 1 0 0 0 2 0 0 0 0 0 0 0 2 1 0 0 2 0 0 12 2 1174.6054 A0A0A0MSW4;P48739 A0A0A0MSW4 260 271 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 2 0.0074248 101.72 By MS/MS By matching 1 1 60762000 29882000 30880000 4705 227 5245 11778;11779 10794 10794 417 1 RGTGQSDDSDIWDDTALIK QEDSVLFRRGTGQSDD WDDTALIKAYDKAVAS R R G I K A 1 1 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 19 1 2091.9709 B4DP61;E7EQZ4;Q16637 B4DP61 23 41 SMN2;SMN1 Survival motor neuron protein yes no 2;3 1.2389E-09 118.84 By MS/MS By MS/MS 4 4 263520000 151050000 112470000 4706 486 5246;5247 11780;11781;11782;11783;11784;11785;11786;11787 10795;10796;10797;10798;10799;10800;10801;10802;10803 10796 918;919;6350 9 RGTGQSDDSDIWDDTALIKAYDK QEDSVLFRRGTGQSDD ALIKAYDKAVASFKHA R R G D K A 2 1 0 6 0 1 0 2 0 2 1 2 0 0 0 2 2 1 1 0 0 0 23 2 2569.1932 B4DP61;E7EQZ4;Q16637 B4DP61 23 45 SMN2;SMN1 Survival motor neuron protein yes no 3 0.0094691 49.106 By matching By MS/MS 1 1 3760300 1913300 1847000 4707 486 5248 11788;11789 10804 10804 918;919;6350 1 RHNSISEAK LQKILDRKRHNSISEA HNSISEAKMRDKHKKE K R H A K M 1 1 1 0 0 0 1 0 1 1 0 1 0 0 0 2 0 0 0 0 0 0 9 1 1040.5363 Q01970 Q01970 1102 1110 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 3 0.0012555 88.021 By MS/MS By MS/MS 1 1 4017400 1258300 2759100 4708 1836 5249 11790;11791 10805;10806 10806 3437 2 RHPDYSVVLLLR MFLYEYARRHPDYSVV YSVVLLLRLAKTYETT R R H L R L 0 2 0 1 0 0 0 0 1 0 3 0 0 0 1 1 0 0 1 2 0 0 12 1 1466.8358 CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;A0A0C4DGB6;C9JKR2 CON__P02768-1 361 372 ALB Serum albumin yes no 3 1.537E-09 132.14 By MS/MS 1 1495700 1495700 0 + 4709 633 5250 11792 10807;10808 10807 2 RHPTGTTPPVK SQNGCQIRRHPTGTTP TGTTPPVKKKPKLLNL R R H V K K 0 1 0 0 0 0 0 1 1 0 0 1 0 0 3 0 3 0 0 1 0 0 11 1 1189.6568 Q96ST3 Q96ST3 429 439 SIN3A Paired amphipathic helix protein Sin3a yes yes 3 0.0029048 72.815 By MS/MS By MS/MS 1 3 2505500 1909500 596010 4710 2542 5251 11793;11794;11795;11796 10809;10810;10811 10809 7015 3 RHPYFYAPELLFFAK KYLYEIARRHPYFYAP PELLFFAKRYKAAFTE R R H A K R 2 1 0 0 0 0 1 0 1 0 2 1 0 3 2 0 0 0 2 0 0 0 15 1 1897.9879 CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;A0A0C4DGB6;H7C013 CON__P02768-1 169 183 ALB Serum albumin yes no 3 0.030836 36.193 By MS/MS 1 2538300 0 2538300 + 4711 633 5252 11797 10812 10812 0 RHSEVETDSK VGAGKRKRRHSEVETD SEVETDSKKKKMKLPE R R H S K K 0 1 0 1 0 0 2 0 1 0 0 1 0 0 0 2 1 0 0 1 0 0 10 1 1186.5578 Q9NX58 Q9NX58 274 283 LYAR Cell growth-regulating nucleolar protein yes yes 2;3 5.8233E-14 171.99 By MS/MS By MS/MS 2 4 46524000 16836000 29688000 4712 2750 5253 11798;11799;11800;11801;11802;11803 10813;10814;10815;10816;10817 10816 5625 5 RHSGSYLVTSV SSGTQSPKRHSGSYLV GSYLVTSV________ K R H S V - 0 1 0 0 0 0 0 1 1 0 1 0 0 0 0 3 1 0 1 2 0 0 11 1 1204.62 P25054 P25054 2833 2843 APC Adenomatous polyposis coli protein yes yes 2 0.0072107 84.821 By matching By MS/MS 1 1 7193100 3296100 3897000 4713 1628 5254 11804;11805 10818 10818 3014;3015 1 RHSIEKETPTNVR ERRQPPQRRHSIEKET KETPTNVRQFLPPSRQ R R H V R Q 0 2 1 0 0 0 2 0 1 1 0 1 0 0 1 1 2 0 0 1 0 0 13 2 1565.8274 J3KNG6;Q08AE8 J3KNG6 310 322 SPIRE1 Protein spire homolog 1 yes no 4 0.019958 44.567 By MS/MS By MS/MS 1 1 6197100 2621600 3575600 4714 1223 5255 11806;11807 10819;10820 10820 2215 2 RHSLEVMNSMVR KHHGTVNKRHSLEVMN EVMNSMVRGMEAMTLK K R H V R G 0 2 1 0 0 0 1 0 1 0 1 0 2 0 0 2 0 0 0 2 0 0 12 1 1457.7231 Q15678 Q15678 640 651 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 3 3.8202E-05 114.27 By matching By MS/MS 1 1 6583700 3027700 3555900 4715 2001 5256 11808;11809 10821 10821 3906 1 RHSSDINHLVTQGR KTGGRGDRRHSSDINH NHLVTQGRESPEGSYT R R H G R E 0 2 1 1 0 1 0 1 2 1 1 0 0 0 0 2 1 0 0 1 0 0 14 1 1618.8288 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 332 345 FNBP1L Formin-binding protein 1-like yes no 3;4 0.0032412 63.145 By MS/MS 2 6570600 0 6570600 4716 7 5257 11810;11811 10822;10823 10822 16;17;6218 2 RHSSDINHLVTQGRESPEGSYTDDANQEVR KTGGRGDRRHSSDINH DDANQEVRGPPQQHGH R R H V R G 1 3 2 3 0 2 3 2 2 1 1 0 0 0 1 4 2 0 1 2 0 0 30 2 3396.5679 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 332 361 FNBP1L Formin-binding protein 1-like yes no 4 1.0803E-07 75.868 By MS/MS By MS/MS 1 1 51806000 30704000 21102000 4717 7 5258 11812;11813 10824;10825 10824 16;17;18;6218 2 RHSVTLPSSK PAGGGFPRRHSVTLPS SVTLPSSKFHQNQLLS R R H S K F 0 1 0 0 0 0 0 0 1 0 1 1 0 0 1 3 1 0 0 1 0 0 10 1 1110.6146 Q07352;G3V2D5;G3V515;G3V2P5 Q07352 52 61 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 yes no 3 0.0033629 69.229 By MS/MS By MS/MS 1 1 2619900 1895400 724450 4718 1861 5259 11814;11815 10826;10827;10828 10827 3503 3 RIDFIPVSPAPSPTR VEKSASPKRIDFIPVS SPAPSPTRGIGKQCFS K R I T R G 1 2 0 1 0 0 0 0 0 2 0 0 0 1 4 2 1 0 0 1 0 0 15 1 1651.9046 Q96E09 Q96E09 136 150 FAM122A Protein FAM122A yes yes 2;3 1.1974E-08 120.82 By MS/MS By MS/MS 4 4 103580000 58395000 45189000 4719 2476 5260;5261 11816;11817;11818;11819;11820;11821;11822;11823 10829;10830;10831;10832;10833;10834;10835 10833 4988;4989;6998 7 RIDFIPVSPAPSPTRGIGK VEKSASPKRIDFIPVS SPTRGIGKQCFSPSLQ K R I G K Q 1 2 0 1 0 0 0 2 0 3 0 1 0 1 4 2 1 0 0 1 0 0 19 2 2007.1265 Q96E09 Q96E09 136 154 FAM122A Protein FAM122A yes yes 3 0.00026828 75.956 By MS/MS By MS/MS 1 1 13926000 6432300 7494100 4720 2476 5262 11824;11825 10836;10837 10837 4988;4989;6998 2 RIDFTPVSPAPSPTR PEKLYSPKRIDFTPVS SPAPSPTRGFGKMFVS K R I T R G 1 2 0 1 0 0 0 0 0 1 0 0 0 1 4 2 2 0 0 1 0 0 15 1 1639.8682 G1UD79;Q7Z309 Q7Z309 127 141 SPACIA2;FAM122B Protein FAM122B no no 2;3 0.00059027 84.035 By MS/MS By MS/MS 3 2 169530000 96208000 73322000 4721 956;2208 5263;5264 11826;11827;11828;11829;11830 10838;10839;10840;10841;10842 10839 1734;1735 5 RIDFTPVSPAPSPTRGFGK PEKLYSPKRIDFTPVS SPTRGFGKMFVSSSGL K R I G K M 1 2 0 1 0 0 0 2 0 1 0 1 0 2 4 2 2 0 0 1 0 0 19 2 2029.0745 G1UD79;Q7Z309 Q7Z309 127 145 SPACIA2;FAM122B Protein FAM122B no no 3 3.7949E-06 90.545 By MS/MS By MS/MS 1 1 53074000 26922000 26153000 4722 956;2208 5265 11831;11832 10843;10844 10844 1734;1735 2 RIDISPSTFR KKSPEIHRRIDISPST DISPSTFRKHGLAHDE R R I F R K 0 2 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 10 1 1190.6408 Q9Y2W1 Q9Y2W1 678 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 1.2791E-05 148.89 By MS/MS By MS/MS 3 3 342900000 206220000 136680000 4723 2897 5266 11833;11834;11835;11836;11837;11838 10845;10846;10847;10848;10849;10850;10851 10845 6036 7 RIDISPSTFRK KKSPEIHRRIDISPST ISPSTFRKHGLAHDEM R R I R K H 0 2 0 1 0 0 0 0 0 2 0 1 0 1 1 2 1 0 0 0 0 0 11 2 1318.7357 Q9Y2W1 Q9Y2W1 678 688 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.00086453 100.4 By MS/MS By MS/MS 1 1 41911000 23652000 18259000 4724 2897 5267 11839;11840 10852;10853 10853 6036 2 RIDISPSTLR QKSPEIHRRIDISPST DISPSTLRKHTRLAGE R R I L R K 0 2 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 10 1 1156.6564 Q9NYF8;E9PK91;E9PQN2;E9PKI6 Q9NYF8 654 663 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 1.0576E-20 179.83 By MS/MS By MS/MS 2 3 983240000 526480000 456760000 4725 2759 5268 11841;11842;11843;11844;11845 10854;10855;10856;10857;10858 10856 5647 5 RIDISPSTLRK QKSPEIHRRIDISPST ISPSTLRKHTRLAGEE R R I R K H 0 2 0 1 0 0 0 0 0 2 1 1 0 0 1 2 1 0 0 0 0 0 11 2 1284.7514 Q9NYF8;E9PK91;E9PQN2;E9PKI6 Q9NYF8 654 664 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0021552 86.539 By MS/MS By MS/MS 1 1 82768000 48162000 34606000 4726 2759 5269 11846;11847 10859;10860;10861;10862 10862 5647 4 RILSDVTHSAVFGVPASK KTQRAGHRRILSDVTH VFGVPASKSTQLLQAA R R I S K S 2 1 0 1 0 0 0 1 1 1 1 1 0 1 1 3 1 0 0 3 0 0 18 1 1883.0265 Q2M2I8;E9PG46 Q2M2I8 634 651 AAK1 AP2-associated protein kinase 1 yes no 3 0.0046722 52.657 By MS/MS By MS/MS 1 1 11766000 5974500 5792000 4727 2030 5270 11848;11849 10863;10864 10863 3966;6850 2 RILSQSTDSLNMR DESPLGLRRILSQSTD STDSLNMRNRTLSVES R R I M R N 0 2 1 1 0 1 0 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 13 1 1519.7777 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 214 226 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.00017338 119.31 By MS/MS By MS/MS 1 1 23073000 12034000 11038000 4728 2450 5271 11850;11851 10865;10866 10866 4931;4932;4933;6990 2 RIPSIVSSPLNSPLDR SSPLADAKRIPSIVSS PLNSPLDRSGIDITDF K R I D R S 0 2 1 1 0 0 0 0 0 2 2 0 0 0 3 4 0 0 0 1 0 0 16 1 1749.9737 P49790 P49790 327 342 NUP153 Nuclear pore complex protein Nup153 yes yes 2;3 3.9286E-10 122.47 By MS/MS By MS/MS 5 4 96219000 55251000 40968000 4729 1729 5272;5273 11852;11853;11854;11855;11856;11857;11858;11859;11860 10867;10868;10869;10870;10871;10872;10873;10874;10875 10869 3249;3250;3251 9 RIQVEQTRDEDLDTDSLD HINPVTEKRIQVEQTR DLDTDSLD________ K R I L D - 0 2 0 5 0 2 2 0 0 1 2 0 0 0 0 1 2 0 0 1 0 0 18 2 2146.9978 V9GYT7 V9GYT7 48 65 PSIP1 yes yes 3 0.028518 46.461 By MS/MS By matching 1 1 27125000 12405000 14721000 4730 3014 5274 11861;11862 10876 10876 6210 1 RISFSASHR RCQAQVSRRISFSASH ISFSASHRLYSKFLSD R R I H R L 1 2 0 0 0 0 0 0 1 1 0 0 0 1 0 3 0 0 0 0 0 0 9 1 1059.5574 E9PKY8;E9PJM0;Q03393 E9PKY8 17 25 PTS 6-pyruvoyl tetrahydrobiopterin synthase yes no 3 0.00096318 105.36 By MS/MS By MS/MS 1 1 9750900 4390200 5360700 4731 811 5275 11863;11864 10877;10878 10877 1455 2 RISGLIYEETR LARRGGVKRISGLIYE GLIYEETRGVLKVFLE K R I T R G 0 2 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 11 1 1335.7147 P62805 P62805 46 56 HIST1H4A Histone H4 yes yes 3 0.002337 71.98 By MS/MS 1 1165000 1165000 0 4732 1801 5276 11865 10879 10879 3377 1 RISHSLYSGIEGLDESPSR TALDDRERRISHSLYS GLDESPSRNAALSRIM R R I S R N 0 2 0 1 0 0 2 2 1 2 2 0 0 0 1 5 0 0 1 0 0 0 19 1 2102.0392 Q5VWV2;Q8TEW0;Q5VWU8;F5GZI3;B1AP52 Q5VWV2 656 674 PARD3 Partitioning defective 3 homolog yes no 3 5.4884E-06 96.153 By MS/MS By MS/MS 1 1 11402000 6758300 4643300 4733 2121 5277 11866;11867 10880;10881 10880 4208;4209;4210;7752 2 RISLSDMPR VLSGGTGRRISLSDMP ISLSDMPRSPMSTNSS R R I P R S 0 2 0 1 0 0 0 0 0 1 1 0 1 0 1 2 0 0 0 0 0 0 9 1 1073.5652 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 350 358 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.025404 72.531 By MS/MS By matching 1 1 7964200 4594400 3369800 4734 69 5278 11868;11869 10882 10882 1 RISQSQPVR IIRNPQQRRISQSQPV ISQSQPVRGRDEEQDD R R I V R G 0 2 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 9 1 1069.5992 E7EMW7;O95071 E7EMW7 1541 1549 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.0037537 139.31 By MS/MS By MS/MS 2 2 61072000 25779000 35293000 4735 707 5279 11870;11871;11872;11873 10883;10884;10885 10884 1254 3 RISSSSVQPCSEEVSTPQDSLAQCK PGRPLYQRRISSSSVQ QDSLAQCKELQDHSNQ R R I C K E 1 1 0 1 2 3 2 0 0 1 1 1 0 0 2 7 1 0 0 2 0 0 25 1 2779.2753 J3QS41;P42694 J3QS41 1762 1786 HELZ Probable helicase with zinc finger domain yes no 3 0.0030568 48.947 By MS/MS 1 4686500 0 4686500 4736 1259 5280 11874 10886 10886 2280;2281 1 RISTSDILSEK DKEQNLTRRISTSDIL TSDILSEKKLGEDEEE R R I E K K 0 1 0 1 0 0 1 0 0 2 1 1 0 0 0 3 1 0 0 0 0 0 11 1 1247.6721 O60293 O60293 350 360 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 1.8272E-05 139.21 By MS/MS By MS/MS 1 1 45372000 26325000 19047000 4737 1402 5281 11875;11876 10887;10888 10887 2579 2 RIVAHAVEVPAVQSPR VRKPIVLKRIVAHAVE VPAVQSPRRSPRISFF K R I P R R 3 2 0 0 0 1 1 0 1 1 0 0 0 0 2 1 0 0 0 4 0 0 16 1 1727.9795 B5MBX0;Q96FF9;H0YCL8 B5MBX0 62 77 CDCA5 Sororin yes no 3 0.00028208 78.78 By MS/MS By MS/MS 1 1 3218300 3218300 0 4738 500 5282 11877;11878 10889;10890 10889 938 2 RKADTTTPTPTAILAPGSPASPPGSLEPK LAKKKGVKRKADTTTP PPGSLEPKAARLPPMR K R K P K A 4 1 0 1 0 0 1 2 0 1 2 2 0 0 7 3 5 0 0 0 0 0 29 2 2857.5185 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;H0YDJ7;U3KPW0;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2 H0Y6K2 287 315 BRD2 Bromodomain-containing protein 2 yes no 3 0.0023031 54.605 By MS/MS By MS/MS 1 1 11471000 5692900 5777800 4739 321 5283 11879;11880 10891;10892;10893 10892 586;587;588 3 RKLSGDQPAAR RKGWESRKRKLSGDQP SGDQPAARTPRSKKKK K R K A R T 2 2 0 1 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 11 2 1197.6578 Q13428;J3KQ96;E7ETY2 Q13428 1347 1357 TCOF1 Treacle protein yes no 3 0.0023834 84.62 By MS/MS By MS/MS 1 1 36153000 21989000 14164000 4740 1915 5284 11881;11882 10894;10895 10894 3679 2 RKPEDVLDDDDAGSAPLK IIFIYEKRRKPEDVLD DAGSAPLKSSGQHQND R R K L K S 2 1 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 18 2 1939.9487 A0A087WUV8;P35613 A0A087WUV8 153 170 BSG Basigin yes no 3 7.9974E-06 90.545 By MS/MS By MS/MS 1 1 19038000 8628100 10410000 4741 51 5285 11883;11884 10896;10897 10897 94 2 RKPNAGGSPAPVR PAGERGERRKPNAGGS GGSPAPVRRRPEASPV R R K V R R 2 2 1 0 0 0 0 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 13 2 1305.7266 Q3KQU3 Q3KQU3 392 404 MAP7D1 MAP7 domain-containing protein 1 yes yes 3 0.0014606 88.19 By MS/MS By matching 1 1 30922000 17785000 13137000 4742 2036 5286 11885;11886 10898 10898 3985 1 RKPSPEPEGEVGPPK AVARTARKRKPSPEPE EGEVGPPKINGEAQPW K R K P K I 0 1 0 0 0 0 3 2 0 0 0 2 0 0 5 1 0 0 0 1 0 0 15 2 1602.8366 Q7Z5L9 Q7Z5L9 357 371 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.0044376 64.244 By matching By MS/MS 1 1 28337000 16018000 12319000 4743 2221 5287 11887;11888 10899 10899 4441 1 RKQSSSEISLAVER EDEAWRQRRKQSSSEI EISLAVERARRRREEE R R K E R A 1 2 0 0 0 1 2 0 0 1 1 1 0 0 0 4 0 0 0 1 0 0 14 2 1588.8533 P48634 P48634 453 466 PRRC2A Protein PRRC2A yes yes 3 0.0028667 71.143 By MS/MS By MS/MS 1 1 12313000 7076200 5236700 4744 1718 5288 11889;11890 10900;10901 10901 3209;3210;3211 2 RKSASDSGCDPASK IEGKDGRRRKSASDSG SGCDPASKKLKGDRGE R R K S K K 2 1 0 2 1 0 0 1 0 0 0 2 0 0 1 4 0 0 0 0 0 0 14 2 1464.6627 Q7LBC6;H0Y9V5 Q7LBC6 287 300 KDM3B Lysine-specific demethylase 3B yes no 3 0.0026341 72.793 By MS/MS By MS/MS 1 1 5420400 1425300 3995000 4745 2204 5289 11891;11892 10902;10903 10903 4393;4394 1 RKSELEFETLK RPAPPPRKRKSELEFE ELEFETLKTPDIDVPK K R K L K T 0 1 0 0 0 0 3 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 11 2 1378.7456 Q5JSH3;H7BY83 Q5JSH3 260 270 WDR44 WD repeat-containing protein 44 yes no 3 0.0077487 68.944 By MS/MS 1 1703000 0 1703000 4746 2073 5290 11893 10904 10904 4074 1 RKSELPQDVYTIK KKEKVLLRRKSELPQD PQDVYTIKALEAHKRA R R K I K A 0 1 0 1 0 1 1 0 0 1 1 2 0 0 1 1 1 0 1 1 0 0 13 2 1575.8621 H0Y8C4;E9PFR3;Q14738 H0Y8C4 473 485 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes no 3 0.0095419 62.94 By MS/MS By MS/MS 1 1 5193500 2467300 2726300 4747 786 5291 11894;11895 10905;10906 10906 1415 2 RKSFTSLYK TERKSTQKRKSFTSLY KSFTSLYKDRCSTGSP K R K Y K D 0 1 0 0 0 0 0 0 0 0 1 2 0 1 0 2 1 0 1 0 0 0 9 2 1128.6291 H0Y2V6;Q5SW79 H0Y2V6 920 928 CEP170 Centrosomal protein of 170 kDa yes no 3 0.019308 54.023 By MS/MS 1 0 0 0 4748 1006 5292 11896 10907 10907 1847 1 RKSQVNGEAGSYEMTNQHVK NKQISRVRRKSQVNGE EMTNQHVKQNGKLEDN R R K V K Q 1 1 2 0 0 2 2 2 1 0 0 2 1 0 0 2 1 0 1 2 0 0 20 2 2262.0811 H0YMH7;Q05D32 H0YMH7 102 121 CTDSPL2 CTD small phosphatase-like protein 2 yes no 4 0.00010813 75.91 By MS/MS By MS/MS 1 1 8262200 4950500 3311700 4749 1100 5293 11897;11898 10908;10909 10908 33 2025 2 RKTSDANETEDHLESLICK DGGQPHKRRKTSDANE HLESLICKVGEKSACS R R K C K V 1 1 1 2 1 0 3 0 1 1 2 2 0 0 0 2 2 0 0 0 0 0 19 2 2245.0645 F2Z2T1;Q09161 F2Z2T1 19 37 NCBP1 Nuclear cap-binding protein subunit 1 yes no 3;4 4.1966E-07 102.5 By MS/MS By MS/MS 2 2 83268000 31448000 51820000 4750 849 5294 11899;11900;11901;11902 10910;10911;10912 10911 1533;6457 3 RKTVFSPTLPAAR WTNDQGARRKTVFSPT SPTLPAARSSLGSLQT R R K A R S 2 2 0 0 0 0 0 0 0 0 1 1 0 1 2 1 2 0 0 1 0 0 13 2 1442.8358 C9J6P4;Q7Z2W4 C9J6P4 373 385 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 3 0.010994 61.495 By matching By MS/MS 1 1 2499100 1358100 1140900 4751 565 5295 11903;11904 10913 10913 1040 1 RKVMDSDEDDDY TTTVKFNRRKVMDSDE DSDEDDDY________ R R K D Y - 0 1 0 5 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 12 2 1486.5882 K7EQA1;O14737 K7EQA1 76 87 PDCD5 Programmed cell death protein 5 yes no 2;3 0.00030396 109.95 By MS/MS By MS/MS 4 3 371520000 202890000 168630000 4752 1285 5296;5297;5298 11905;11906;11907;11908;11909;11910;11911 10914;10915;10916;10917;10918;10919;10920;10921;10922 10919 143 2317;7486 9 RLASTSDIEEKENR YVAPTIPRRLASTSDI DIEEKENRDSSSLRTS R R L N R D 1 2 1 1 0 0 3 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 14 2 1646.8224 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 504 517 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 3 1.3753E-07 122.13 By MS/MS By MS/MS 1 1 68438000 35626000 32812000 4753 1349 5299 11912;11913 10923;10924 10924 2458;6594 2 RLDSSCLESVK ESRNRVKRRLDSSCLE SSCLESVKQKCVKSCN R R L V K Q 0 1 0 1 1 0 1 0 0 0 2 1 0 0 0 3 0 0 0 1 0 0 11 1 1292.6395 F5GZ90;Q9NZJ0 F5GZ90 512 522 DTL Denticleless protein homolog yes no 2 8.9539E-30 186.56 By MS/MS By MS/MS 1 1 41297000 21860000 19437000 4754 867 5300 11914;11915 10925;10926;10927 10926 1558;1559 3 RLDSSCLESVKQK ESRNRVKRRLDSSCLE CLESVKQKCVKSCNCV R R L Q K C 0 1 0 1 1 1 1 0 0 0 2 2 0 0 0 3 0 0 0 1 0 0 13 2 1548.793 F5GZ90;Q9NZJ0 F5GZ90 512 524 DTL Denticleless protein homolog yes no 3 0.00095792 97.352 By MS/MS By matching 1 1 14836000 8150600 6685800 4755 867 5301 11916;11917 10928 10928 1558;1559 1 RLEMHHSSSYGVDYKR LSQTGLSKRLEMHHSS SYGVDYKRSYPTNSLT K R L K R S 0 2 0 1 0 0 1 1 2 0 1 1 1 0 0 3 0 0 2 1 0 0 16 2 1963.9323 E9PDV9;B3KU01;H0Y8V9;A0A0A0MQU6;Q9H2E6 E9PDV9 282 297 SEMA6A Semaphorin-6A yes no 2 0.026258 44.294 By MS/MS 1 0 0 0 4756 163 5302 11918 10929 10929 7189;7190 1 RLGGLRPESPESLTSVSR DTPLRRSRRLGGLRPE ESLTSVSRTRRALVEF R R L S R T 0 3 0 0 0 0 2 2 0 0 3 0 0 0 2 4 1 0 0 1 0 0 18 2 1940.0439 Q9H6F5;H0YG79 Q9H6F5 10 27 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 0.00012739 80.733 By MS/MS By MS/MS 1 1 90755000 40819000 49936000 4757 2666 5303 11919;11920 10930;10931 10931 5438 2 RLGRGSVSDCSDGTSELEEPLGEDPR LFSAVVARRLGRGSVS EPLGEDPRARPPGPPD R R L P R A 0 3 0 3 1 0 4 4 0 0 3 0 0 0 2 4 1 0 0 1 0 0 26 2 2817.2835 P50548 P50548 180 205 ERF ETS domain-containing transcription factor ERF yes yes 3 0.006863 48.984 By MS/MS By matching 1 1 10772000 5211700 5560300 4758 1739 5304 11921;11922 10932 10932 3292 1 RLGSSTLGSK NVGMGTTRRLGSSTLG GSSTLGSKSSAAKEGA R R L S K S 0 1 0 0 0 0 0 2 0 0 2 1 0 0 0 3 1 0 0 0 0 0 10 1 1004.5615 Q7Z460;H0Y5T1;F8WA11;C9JP76;C9J151 Q7Z460 277 286 CLASP1 CLIP-associating protein 1 yes no 2 0.010085 79.283 By matching By MS/MS 1 1 5906400 2869000 3037400 4759 2217 5305 11923;11924 10933 10933 4427 1 RLNHSPPQSSSR EREKKFSRRLNHSPPQ SPPQSSSRYRENRSRD R R L S R Y 0 2 1 0 0 1 0 0 1 0 1 0 0 0 2 4 0 0 0 0 0 0 12 1 1364.6909 A0A087X0H9;Q5T8P6 A0A087X0H9 123 134 RBM26 RNA-binding protein 26 yes no 3 0.0020545 71.286 By MS/MS By MS/MS 1 1 230290000 149010000 81280000 4760 126 5306 11925;11926 10934;10935 10934 224 2 RLNTLNKCASMK DLVEPLCRRLNTLNKC LNKCASMKLDVNFQRK R R L M K L 1 1 2 0 1 0 0 0 0 0 2 2 1 0 0 1 1 0 0 0 0 0 12 2 1434.7435 H3BRG5;Q9Y3M8 H3BRG5 94 105 STARD13 StAR-related lipid transfer protein 13 yes no 3 0.02521 58.274 By MS/MS 1 1322100 0 1322100 4761 1137 5307 11927 10936 10936 1 RLPSKELPDSSSPVPANNIR TIDTSRKKRLPSKELP PVPANNIRVIKNSIRL K R L I R V 1 2 2 1 0 0 1 0 0 1 2 1 0 0 4 4 0 0 0 1 0 0 20 2 2176.16 Q9BWT3;A0A0C4DH56 Q9BWT3 705 724 PAPOLG Poly(A) polymerase gamma yes no 3 5.9171E-08 86.617 By MS/MS By MS/MS 1 1 28647000 18233000 10414000 4762 2593 5308 11928;11929 10937;10938 10937 5248 2 RLSAQGQAISVVGSLSSMSPLEEEAPQAK TESVLIKRRLSAQGQA EEEAPQAKRRPEPIIP R R L A K R 4 1 0 0 0 3 3 2 0 1 3 1 1 0 2 6 0 0 0 2 0 0 29 1 2969.5128 Q92797;M0R3C7;A0A087WUE9 Q92797 492 520 SYMPK Symplekin yes no 3 1.3784E-77 156.51 By MS/MS By MS/MS 3 3 199670000 153060000 46610000 4763 2439 5309;5310 11930;11931;11932;11933;11934;11935 10939;10940;10941;10942 10941 326 4912 4 RLSCSELSLYQPLQNSSK SVQAEILKRLSCSELS QPLQNSSKEKNDKASW K R L S K E 0 1 1 0 1 2 1 0 0 0 4 1 0 0 1 5 0 0 1 0 0 0 18 1 2109.0525 Q12923 Q12923 934 951 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 3 0.0064449 65.287 By matching By MS/MS 1 1 4475700 2299300 2176400 4764 1885 5311 11936;11937 10943 10943 3592;3593;7679 1 RLSDCESTDVKR PKSQKNRRRLSDCEST CESTDVKRAGSHTAQN R R L K R A 0 2 0 2 1 0 1 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 12 2 1464.6991 Q7Z333 Q7Z333 1364 1375 SETX Probable helicase senataxin yes yes 3 0.00013259 112.03 By MS/MS By MS/MS 1 1 9346800 5590800 3756000 4765 2209 5312 11938;11939 10944;10945 10944 4407 2 RLSEGVEPWR GKPDLPKRRLSEGVEP SEGVEPWRGQLKKSPE R R L W R G 0 2 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 1 0 1 0 0 10 1 1227.636 Q92794;C9K0F9 Q92794 939 948 KAT6A Histone acetyltransferase KAT6A;Histone acetyltransferase yes no 2 0.0092633 80.522 By MS/MS By MS/MS 1 1 21351000 12166000 9185400 4766 2438 5313 11940;11941 10946;10947 10947 4907 2 RLSEQLAHTPTAFK IAAGDIRRRLSEQLAH AHTPTAFKRDPEDPSA R R L F K R 2 1 0 0 0 1 1 0 1 0 2 1 0 1 1 1 2 0 0 0 0 0 14 1 1597.8576 A0A0B4J1S8;Q9UBF8;F8W860 A0A0B4J1S8 521 534 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 0.014492 47.68 By MS/MS By MS/MS 1 1 5853400 3186900 2666500 4767 257 5314 11942;11943 10948;10949 10949 467 2 RLSESLHVVDENKNESK SEPSKPARRLSESLHV DENKNESKLEREHKRR R R L S K L 0 1 2 1 0 0 3 0 1 0 2 2 0 0 0 3 0 0 0 2 0 0 17 2 1983.0021 Q8NFC6 Q8NFC6 633 649 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.0079653 57.045 By MS/MS By matching 1 1 8936600 4315400 4621200 4768 2353 5315 11944;11945 10950 10950 4717 1 RLSFAVPFR YVAWDREKRLSFAVPF LSFAVPFREMKPVIFL K R L F R E 1 2 0 0 0 0 0 0 0 0 1 0 0 2 1 1 0 0 0 1 0 0 9 1 1091.624 P78527 P78527 891 899 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0087063 89.9 By MS/MS By MS/MS 1 1 2055700 1118100 937620 4769 1816 5316 11946;11947 10951;10952 10951 3390 2 RLSGNEYVLSTK GLMSDGLRRLSGNEYV NEYVLSTKNTQMVSSN R R L T K N 0 1 1 0 0 0 1 1 0 0 2 1 0 0 0 2 1 0 1 1 0 0 12 1 1365.7252 O60658 O60658 455 466 PDE8A High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A yes yes 2 0.018854 55.806 By matching By MS/MS 1 1 8615100 4745400 3869700 4770 1415 5317 11948;11949 10953 10953 7529 0 RLSITSLTGK QKSPTTARRLSITSLT SITSLTGKNNKPNAGQ R R L G K N 0 1 0 0 0 0 0 1 0 1 2 1 0 0 0 2 2 0 0 0 0 0 10 1 1074.6397 G3V1S3;Q6ZUT9 G3V1S3 1109 1118 DENND5B DENN domain-containing protein 5B yes no 2 0.0051489 89.356 By MS/MS By MS/MS 1 1 10475000 5599100 4876000 4771 960 5318 11950;11951 10954;10955 10955 1747 2 RLSKPGTAAELR AEVRKFTKRLSKPGTA PGTAAELRQSVSEAVR K R L L R Q 2 2 0 0 0 0 1 1 0 0 2 1 0 0 1 1 1 0 0 0 0 0 12 2 1297.7466 A6NIW2;Q5JSL3 A6NIW2 10 21 DOCK11 Dedicator of cytokinesis protein 11 yes no 3 0.00011586 113.11 By MS/MS By MS/MS 1 1 31706000 19337000 12370000 4772 418 5319 11952;11953 10956;10957 10956 785 2 RLSLDSSCLDSSR SSGGLQSKRLSLDSSC SSCLDSSRDTDNGTPF K R L S R D 0 2 0 2 1 0 0 0 0 0 3 0 0 0 0 5 0 0 0 0 0 0 13 1 1494.7097 Q9BWT3;A0A0C4DH56 Q9BWT3 523 535 PAPOLG Poly(A) polymerase gamma yes no 2;3 0.00037852 106.52 By MS/MS By MS/MS 2 2 28548000 17063000 11486000 4773 2593 5320 11954;11955;11956;11957 10958;10959;10960;10961 10960 5249 4 RLSLPADIR SPVRDINKRLSLPADI LSLPADIRLPEGYLEK K R L I R L 1 2 0 1 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 9 1 1039.6138 F5H6Z0;Q00537;F8VZY6;F8VQZ9;H0YBX5;E5RJM2;E5RGN0;A0A087WZU2;Q00536;E5RIY8;E5RIU4 H0YBX5 77 85 CDK17;CDK16 Cyclin-dependent kinase 17;Cyclin-dependent kinase 16 no no 2 0.0037864 137.01 By MS/MS By MS/MS 1 1 34800000 20822000 13978000 4774 117;896 5321 11958;11959 10962;10963;10964 10964 209 3 RLSLPGLLSQVSPR EETEGGSRRLSLPGLL LLSQVSPRLLRKAARV R R L P R L 0 2 0 0 0 1 0 1 0 0 4 0 0 0 2 3 0 0 0 1 0 0 14 1 1521.8991 Q96Q42 Q96Q42 481 494 ALS2 Alsin yes yes 2 0.0069959 81.854 By MS/MS By MS/MS 1 1 20858000 12696000 8161500 4775 2527 5322 11960;11961 10965;10966 10965 5102;5103 2 RLSNPCIQR ASSMRQARRLSNPCIQ LSNPCIQRSIPPVLQN R R L Q R S 0 2 1 0 1 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 9 1 1142.5979 Q5RGS4 Q5RGS4 306 314 PLEKHA1 yes yes 3 0.0017771 81.92 By MS/MS By MS/MS 1 1 2549500 2549500 0 4776 2085 5323 11962;11963 10967;10968 10968 4108 2 RLSNVSLPGPGLSVPR NCSGVRKRRLSNVSLP GPGLSVPRPLQPEYVA R R L P R P 0 2 1 0 0 0 0 2 0 0 3 0 0 0 3 3 0 0 0 2 0 0 16 1 1647.942 O94806;C9JKP8 O94806 211 226 PRKD3 Serine/threonine-protein kinase D3 yes no 3 0.026443 45.707 By MS/MS 1 0 0 0 4777 1463 5324 11964 10969 10969 1 RLSNVSLTGVSTIR NCSGVRRRRLSNVSLT LTGVSTIRTSSAELST R R L I R T 0 2 1 0 0 0 0 1 0 1 2 0 0 0 0 3 2 0 0 2 0 0 14 1 1501.8576 Q15139;F8WBA3 Q15139 203 216 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 2;3 6.9245E-05 109.87 By MS/MS By MS/MS 4 4 66141000 37553000 28587000 4778 1978 5325;5326 11965;11966;11967;11968;11969;11970;11971;11972 10970;10971;10972;10973;10974;10975 10971 3852;3853 6 RLSPPSSSAASSYSFSDLNSTR FEYETQRRRLSPPSSS FSDLNSTRGDADMYDL R R L T R G 2 2 1 1 0 0 0 0 0 0 2 0 0 1 2 9 1 0 1 0 0 0 22 1 2316.0982 P50402 P50402 47 68 EMD Emerin yes yes 3 0.00057791 61.345 By MS/MS By MS/MS 1 2 13162000 5230000 7932000 4779 1738 5327 11973;11974;11975 10976;10977 10977 3291 2 RLSPSASPPR SSPPRKTRRLSPSASP SPSASPPRRRHRPSPP R R L P R R 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 0 0 0 10 1 1066.5883 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 382 391 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2;3 0.0017358 102.33 By MS/MS By MS/MS 3 6 125850000 34609000 91241000 4780 442;1311 5328;5329 11976;11977;11978;11979;11980;11981;11982;11983;11984 10978;10979;10980;10981;10982;10983;10984;10985;10986;10987;10988;10989;10990;10991;10992;10993 10978 848;849;850 15 RLSQPESAEK SSSSVQARRLSQPESA SQPESAEKHVTQRLQP R R L E K H 1 1 0 0 0 1 2 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1143.5884 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 650 659 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 7.3711E-14 171.62 By MS/MS By MS/MS 2 2 112860000 53669000 59196000 4781 725 5330 11985;11986;11987;11988 10994;10995;10996;10997;10998 10995 1296 5 RLSQPESAEKHVTQR SSSSVQARRLSQPESA AEKHVTQRLQPERGSP R R L Q R L 1 2 0 0 0 2 2 0 1 0 1 1 0 0 1 2 1 0 0 1 0 0 15 2 1764.9231 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 650 664 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3;4 2.0266E-06 116.09 By MS/MS By MS/MS 2 2 89729000 33613000 56115000 4782 725 5331 11989;11990;11991;11992 10999;11000;11001;11002 11002 1296 3 RLSQPPLVVAK LRSTSLSRRLSQPPLV QPPLVVAKSKKVPLSK R R L A K S 1 1 0 0 0 1 0 0 0 0 2 1 0 0 2 1 0 0 0 2 0 0 11 1 1206.7448 Q8NFU7 Q8NFU7 114 124 TET1 Methylcytosine dioxygenase TET1 yes yes 2 0.0076489 73.219 By MS/MS 1 0 0 0 4783 2356 5332 11993 11003 11003 4729 1 RLSQRPTPEELEQR QIGNTLIRRLSQRPTP TPEELEQRNILQPKNE R R L Q R N 0 3 0 0 0 2 3 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 14 2 1737.9122 Q8IZ21 Q8IZ21 588 601 PHACTR4 Phosphatase and actin regulator 4 yes yes 3 0.027234 50.188 By matching By MS/MS 1 1 30863000 18391000 12472000 4784 2291 5333 11994;11995 11004 11004 1 RLSQSDEDVIR GSSLKKKKRLSQSDED QSDEDVIRLIGQHLNG K R L I R L 0 2 0 2 0 1 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 11 1 1316.6684 H0Y917;Q9H7D7 H0Y917 111 121 WDR26 WD repeat-containing protein 26 yes no 2;3 1.5071E-05 134.02 By MS/MS By MS/MS 2 2 67611000 35775000 31836000 4785 1044 5334 11996;11997;11998;11999 11005;11006;11007 11006 1939;1940 3 RLSSASTGKPPLSVEDDFEK SQMSMKTRRLSSASTG SVEDDFEKLIWEISGG R R L E K L 1 1 0 2 0 0 2 1 0 0 2 2 0 1 2 4 1 0 0 1 0 0 20 2 2162.0855 O75152;A0A1B0GTU1;A0A1B0GUI2 O75152 756 775 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 0.010408 58.082 By MS/MS By matching 1 1 9355000 6041800 3313200 4786 1431 5335 12000;12001 11008 11008 2640 0 RLSSFVTK SMRGAGGRRLSSFVTK RLSSFVTKGYRTRRLA R R L T K G 0 1 0 0 0 0 0 0 0 0 1 1 0 1 0 2 1 0 0 1 0 0 8 1 936.53927 F8VPD4;P27708;H7C3Z5 F8VPD4 1341 1348 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 2 0.017817 93.561 By MS/MS By MS/MS 1 2 7042200 2220500 4821700 4787 910 5336 12002;12003;12004 11009;11010 11009 1630 2 RLSSLRASTSK QEQIAKRRRLSSLRAS SLRASTSKSESSQK__ R R L S K S 1 2 0 0 0 0 0 0 0 0 2 1 0 0 0 4 1 0 0 0 0 0 11 2 1204.6888 P62753;A2A3R5 P62753 233 243 RPS6 40S ribosomal protein S6 yes no 2 6.7138E-05 115.26 By MS/MS By MS/MS 1 1 207500000 114030000 93466000 4788 1800 5337 12005;12006 11011;11012 11012 3371;3372;3373;3374;6747 2 RLSSQDVLR LFPREYFRRLSSQDVL LSSQDVLRCQSSSKRK R R L L R C 0 2 0 1 0 1 0 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 9 1 1072.5989 Q92794;C9K0F9 Q92794 1087 1095 KAT6A Histone acetyltransferase KAT6A;Histone acetyltransferase yes no 2 0.017523 77.593 By matching By MS/MS 1 1 6209700 2747600 3462100 4789 2438 5338 12007;12008 11013 11013 4905;4906 1 RLSSSLNPSK DGISPKRRRLSSSLNP SSSLNPSKRAPKQTED R R L S K R 0 1 1 0 0 0 0 0 0 0 2 1 0 0 1 4 0 0 0 0 0 0 10 1 1087.5986 D6RIG7;Q13535 D6RIG7 114 123 ATR Serine/threonine-protein kinase ATR yes no 2 0.0033509 103.14 By matching By MS/MS 1 1 12523000 5603600 6919100 4790 684 5339 12009;12010 11014 11014 1209 1 RLSSTSLASGHSVR NCSGARKRRLSSTSLA LASGHSVRLGTSESLP R R L V R L 1 2 0 0 0 0 0 1 1 0 2 0 0 0 0 5 1 0 0 1 0 0 14 1 1456.7746 B4DTS2;Q9BZL6;M0QZ82 B4DTS2 195 208 PRKD2 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2 yes no 3 8.8495E-15 144.25 By MS/MS By MS/MS 2 2 27241000 15041000 12200000 4791 491 5340;5341 12011;12012;12013;12014 11015;11016;11017 11015 926;6351 3 RLSTHSPFR PRPSEWDKRLSTHSPF LSTHSPFRTLNINGQI K R L F R T 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 9 1 1099.5887 Q4VB86;P11171;A0A1B0GWG0 Q4VB86 465 473 EPB41 Protein 4.1 yes no 3 0.0039587 73.951 By MS/MS By MS/MS 1 1 13723000 5504600 8218500 4792 1561 5342 12015;12016 11018;11019;11020 11020 2863;6667 3 RLSTLILHGGGTVCR VRPSPAKRRLSTLILH HGGGTVCRVQEPGAVL R R L C R V 0 2 0 0 1 0 0 3 1 1 3 0 0 0 0 1 2 0 0 1 0 0 15 1 1638.8988 Q9NYB0 Q9NYB0 41 55 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 3 0.027909 42.711 By MS/MS By matching 1 1 6223900 2556800 3667100 4793 2756 5343 12017;12018 11021 11021 1 RLSTSPDVIQGHQPR RAQQQSQRRLSTSPDV VIQGHQPRDNHTDHGG R R L P R D 0 2 0 1 0 2 0 1 1 1 1 0 0 0 2 2 1 0 0 1 0 0 15 1 1689.8911 Q9Y385 Q9Y385 264 278 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 3 7.4291E-16 137.13 By MS/MS By MS/MS 1 1 76103000 42243000 33860000 4794 2903 5344 12019;12020 11022;11023 11022 6046;7127 2 RMLAEWLVAESR R M S R 2 2 0 0 0 0 2 0 0 0 2 0 1 0 0 1 0 1 0 1 0 0 12 1 1459.7606 REV__Q96JG8 yes no 2 0.010236 59.153 By MS/MS 1 6928800 6928800 0 + 4795 3007 5345 12021 11024 11024 392 6200 0 RMNSTGGQTPR LEQMPQRRRMNSTGGQ STGGQTPRRDLEKVLT R R M P R R 0 2 1 0 0 1 0 2 0 0 0 0 1 0 1 1 2 0 0 0 0 0 11 1 1203.5779 Q96ST2;A0A1B0GW95 Q96ST2 717 727 IWS1 Protein IWS1 homolog yes no 2 0.011669 67.118 By MS/MS 1 0 0 0 4796 2541 5346 12022 11025 11025 5126 1 RMQSLSLNK DDATLSGKRMQSLSLN MQSLSLNK________ K R M N K - 0 1 1 0 0 1 0 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 9 1 1075.5808 Q13442 Q13442 173 181 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 2 0.0038994 125.23 By matching By MS/MS 1 1 14260000 7017400 7242500 4797 1916 5347 12023;12024 11026 11026 3693;3694 1 RMSADMSEIEAR LPPTSEGKRMSADMSE DMSEIEARIAATTGNG K R M A R I 2 2 0 1 0 0 2 0 0 1 0 0 2 0 0 2 0 0 0 0 0 0 12 1 1394.6282 Q9UG54;O43318 Q9UG54 68 79 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 2 0.0047943 90.259 By MS/MS By matching 1 1 39797000 25825000 13972000 4798 1379 5348 12025;12026 11027 11027 2524 1 RMSDEFVDSFK QRYGRELRRMSDEFVD DEFVDSFKKGLPRPKS R R M F K K 0 1 0 2 0 0 1 0 0 0 0 1 1 2 0 2 0 0 0 1 0 0 11 1 1359.6129 Q92934;F5H3B1;F5H1R6 Q92934 116 126 BAD Bcl2-associated agonist of cell death yes no 2 7.6893E-16 173.33 By MS/MS By matching 1 1 12838000 8196800 4640800 4799 2449 5349 12027;12028 11028 11028 4927 1 RMSDEFVDSFKK QRYGRELRRMSDEFVD EFVDSFKKGLPRPKSA R R M K K G 0 1 0 2 0 0 1 0 0 0 0 2 1 2 0 2 0 0 0 1 0 0 12 2 1487.7079 Q92934;F5H3B1;F5H1R6 Q92934 116 127 BAD Bcl2-associated agonist of cell death yes no 3 9.0706E-06 119.96 By MS/MS By MS/MS 2 2 34044000 16431000 17613000 4800 2449 5350;5351 12029;12030;12031;12032 11029;11030;11031;11032 11032 327 4927 4 RMSGEPIQTVESIR GYHSASNRRMSGEPIQ IQTVESIRVPGKGNRG R R M I R V 0 2 0 0 0 1 2 1 0 2 0 0 1 0 1 2 1 0 0 1 0 0 14 1 1601.8195 Q5VT52 Q5VT52 1097 1110 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2;3 0.022259 49.149 By MS/MS 2 1022900 0 1022900 4801 2115 5352 12033;12034 11033;11034 11034 2 RNDDISELEDLSELEDLKDAK QGLPTMARRNDDISEL LEDLKDAKLQTLKELF R R N A K L 1 1 1 5 0 0 4 0 0 1 4 2 0 0 0 2 0 0 0 0 0 0 21 2 2446.1711 D6RAY8;Q9H4L7 D6RAY8 141 161 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 0.0012987 66.308 By MS/MS 1 2886700 2886700 0 4802 653 5353 12035 11035 11035 1183 1 RNEGVVGGEDYEEVDR SYAPRHSRRNEGVVGG EDYEEVDRYSRQGRVA R R N D R Y 0 2 1 2 0 0 4 3 0 0 0 0 0 0 0 0 0 0 1 3 0 0 16 1 1821.8129 H3BQQ2;Q86UK7 H3BQQ2 241 256 ZNF598 Zinc finger protein 598 yes no 2;3 7.9093E-07 113.88 By MS/MS By MS/MS 2 2 34935000 16600000 18335000 4803 1131 5354 12036;12037;12038;12039 11036;11037;11038 11038 7462 3 RNEGVVGGEDYEEVDRYSR SYAPRHSRRNEGVVGG EEVDRYSRQGRVARAG R R N S R Q 0 3 1 2 0 0 4 3 0 0 0 0 0 0 0 1 0 0 2 3 0 0 19 2 2228.0094 H3BQQ2;Q86UK7 H3BQQ2 241 259 ZNF598 Zinc finger protein 598 yes no 3;4 1.4595E-07 107.62 By MS/MS By MS/MS 1 2 137870000 77981000 59886000 4804 1131 5355 12040;12041;12042 11039;11040;11041 11039 2066;7462 3 RNESLTATDGLR NNLSCALRRNESLTAT LTATDGLRGVRRNSSF R R N L R G 1 2 1 1 0 0 1 1 0 0 2 0 0 0 0 1 2 0 0 0 0 0 12 1 1331.6793 H0Y507;Q5TCZ1 H0Y507 926 937 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 3 0.0032256 71.279 By MS/MS 1 0 0 0 4805 1022 5356 12043 11042 11042 1899 1 RNGSPTPAGSLGGGAVATAGGPGSR ________________ TAGGPGSRLQPMRATV R R N S R L 4 2 1 0 0 0 0 8 0 0 1 0 0 0 3 3 2 0 0 1 0 0 25 1 2151.0781 Q6P1L5 Q6P1L5 7 31 FAM117B Protein FAM117B yes yes 3 0.0018224 50.723 By matching By MS/MS 1 1 12178000 6720300 5457300 4806 2152 5357 12044;12045 11043 11043 4285;6903 1 RNLLEDDSDEEEDFFLR TGSVKSERRNLLEDDS EEEDFFLRGPSGPRFG R R N L R G 0 2 1 4 0 0 4 0 0 0 3 0 0 2 0 1 0 0 0 0 0 0 17 1 2140.9549 O75379 O75379 23 39 VAMP4 Vesicle-associated membrane protein 4 yes yes 2;3 3.763E-11 121.46 By MS/MS By MS/MS 2 2 44790000 25186000 19604000 4807 1435 5358 12046;12047;12048;12049 11044;11045;11046;11047;11048;11049 11044 2644 6 RNNMTASMFDLSMK ________________ SMFDLSMKDKSRNPFG M R N M K D 1 1 2 1 0 0 0 0 0 0 1 1 3 1 0 2 1 0 0 0 0 0 14 1 1644.7422 E7EX40 E7EX40 2 15 RAB11FIP1 yes yes 2 0.0070242 62.357 By MS/MS 1 0 0 0 4808 752 5359 12050 11050 11050 1370;1371;6434 1 RNSAKGCENLNIVQDK TPKKRKARRNSAKGCE NLNIVQDKIMQQETSV R R N D K I 1 1 3 1 1 1 1 1 0 1 1 2 0 0 0 1 0 0 0 1 0 0 16 2 1844.9163 Q7Z417 Q7Z417 228 243 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 3 0.00013694 102.72 By MS/MS By MS/MS 1 1 29229000 16131000 13098000 4809 2214 5360 12051;12052 11051;11052 11052 4417 2 RNSCNVGGGGGGFK PGGGGGKRRNSCNVGG GGGGGGFKHPAFKRRR R R N F K H 0 1 2 0 1 0 0 6 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1365.6208 Q7L2J0 Q7L2J0 150 163 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 0.0017882 97.767 By MS/MS By MS/MS 1 1 17014000 7343900 9670000 4810 2198 5361 12053;12054 11053;11054 11053 4377 2 RNSEGSELSCTEGSLTSSLDSR QEVTKSSRRNSEGSEL LTSSLDSRRQLFSSHK R R N S R R 0 2 1 1 1 0 3 2 0 0 3 0 0 0 0 7 2 0 0 0 0 0 22 1 2371.0558 Q5T5U3;A0A087WW76 Q5T5U3 1666 1687 ARHGAP21 Rho GTPase-activating protein 21 yes no 3 4.9434E-10 98.76 By MS/MS By MS/MS 1 1 19484000 10896000 8587800 4811 2098 5362 12055;12056 11055;11056 11055 4150;4151 2 RNSFSENEK PKKKRGERRNSFSENE NSFSENEKHTHRIKDS R R N E K H 0 1 2 0 0 0 2 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 9 1 1109.5102 Q9HCG8 Q9HCG8 827 835 CWC22 Pre-mRNA-splicing factor CWC22 homolog yes yes 2 0.003593 87.713 By MS/MS By MS/MS 4 2 23921000 12701000 11220000 4812 2693 5363 12057;12058;12059;12060;12061;12062 11057;11058;11059;11060 11058 5496;5497 4 RNSFTPLSSSNTIR NQTPVRMRRNSFTPLS LSSSNTIRRPRNYSVG R R N I R R 0 2 2 0 0 0 0 0 0 1 1 0 0 1 1 4 2 0 0 0 0 0 14 1 1578.8114 O60825 O60825 464 477 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 2;3 1.8996E-05 114.58 By MS/MS By MS/MS 2 2 79201000 44177000 35024000 4813 1422 5364 12063;12064;12065;12066 11061;11062;11063 11061 2617;6625 3 RNSLEGYSR SPSKSSDRRNSLEGYS NSLEGYSRSVRSRSGE R R N S R S 0 2 1 0 0 0 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 9 1 1080.5312 Q8NDT2 Q8NDT2 560 568 RBM15B Putative RNA-binding protein 15B yes yes 2 0.013112 83.137 By MS/MS By matching 1 1 9616900 4578300 5038600 4814 2345 5365 12067;12068 11064 11064 4703 1 RNSLTGEEGQLAR PRRAGALRRNSLTGEE GEEGQLARVSNWPLYC R R N A R V 1 2 1 0 0 1 2 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 13 1 1429.7274 Q9BX95 Q9BX95 110 122 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 3 1.1161E-07 122.5 By MS/MS By MS/MS 1 1 25639000 13584000 12055000 4815 2596 5366 12069;12070 11065;11066 11066 5257;7031 2 RNSNSPPSPSSMNQR NQVHSTTRRNSNSPPS SPSSMNQRRLGPREVG R R N Q R R 0 2 3 0 0 1 0 0 0 0 0 0 1 0 3 5 0 0 0 0 0 0 15 1 1657.7591 Q7Z5L9 Q7Z5L9 453 467 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2;3 0.0010322 72.932 By MS/MS By MS/MS 2 2 36344000 17117000 19227000 4816 2221 5367 12071;12072;12073;12074 11067;11068;11069 11068 4443;4444;4445 3 RNSRTEEPTVASESVENGHR EKSKIPGRRNSRTEEP ESVENGHRKRSSRPAS R R N H R K 1 3 2 0 0 0 4 1 1 0 0 0 0 0 1 3 2 0 0 2 0 0 20 2 2254.0686 A0A0D9SFT8;F6M2K2;Q14686 A0A0D9SFT8 153 172 NCOA6 Nuclear receptor coactivator 6 yes no 4 0.0076815 47.016 By matching By MS/MS 1 1 12501000 5139400 7361700 4817 316 5368 12075;12076 11070 11070 576;6304 1 RNSSEASSGDFLDLK LESSGLQRRNSSEASS SGDFLDLKGEGDIHEN R R N L K G 1 1 1 2 0 0 1 1 0 0 2 1 0 1 0 4 0 0 0 0 0 0 15 1 1624.7693 J3KSH8;J3KT51;Q9UK76 J3KSH8 39 53 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 2;3 7.1189E-21 141.74 By MS/MS By MS/MS 2 2 280750000 168900000 111860000 4818 1242 5369 12077;12078;12079;12080 11071;11072;11073;11074 11072 2251 4 RNSSSPVSPASVPGQR HSTTASARRNSSSPVS PASVPGQRRLASRNGD R R N Q R R 1 2 1 0 0 1 0 1 0 0 0 0 0 0 3 5 0 0 0 2 0 0 16 1 1624.8281 Q9H1B7 Q9H1B7 655 670 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 2 0.0076238 71.286 By matching By MS/MS 1 1 8219600 4025500 4194100 4819 2636 5370 12081;12082 11075 11075 5369;5370 1 RNSTTFPSR QAEAPSARRNSTTFPS NSTTFPSRHGLLLPAS R R N S R H 0 2 1 0 0 0 0 0 0 0 0 0 0 1 1 2 2 0 0 0 0 0 9 1 1064.5363 Q96E09 Q96E09 60 68 FAM122A Protein FAM122A yes yes 2 2.5519E-05 158.06 By MS/MS By MS/MS 1 1 28936000 13884000 15052000 4820 2476 5371 12083;12084 11076;11077;11078 11078 4990 3 RNSTTIMSR QPYTLRTRRNSTTIMS NSTTIMSRHSLLLSSS R R N S R H 0 2 1 0 0 0 0 0 0 1 0 0 1 0 0 2 2 0 0 0 0 0 9 1 1064.5397 G1UD79;Q7Z309 Q7Z309 48 56 SPACIA2;FAM122B Protein FAM122B no no 2 0.0060615 112.44 By MS/MS By MS/MS 2 1 27455000 18070000 9384500 4821 956;2208 5372 12085;12086;12087 11079;11080;11081 11080 1738;6481 3 RNSVERPAEPVAGAATPSLVEQQK NRMCADVRRNSVERPA PSLVEQQKMLEELNKQ R R N Q K M 4 2 1 0 0 2 3 1 0 0 1 1 0 0 3 2 1 0 0 3 0 0 24 2 2533.3249 Q9BTC0 Q9BTC0 1454 1477 DIDO1 Death-inducer obliterator 1 yes yes 3 0.00024435 67.56 By MS/MS By matching 1 1 31269000 18578000 12691000 4822 2576 5373 12088;12089 11082 11082 5205 1 RNSVTPLASPEPTK KGPNPLMRRNSVTPLA LASPEPTKKPRINSFE R R N T K K 1 1 1 0 0 0 1 0 0 0 1 1 0 0 3 2 2 0 0 1 0 0 14 1 1495.7995 Q9H178;Q5W015;Q5VX20;Q16875 Q9H178 28 41 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes no 3 0.00097925 73.722 By MS/MS By MS/MS 2 2 8485600 4422200 4063400 4823 2022 5374;5375 12090;12091;12092;12093 11083;11084;11085;11086 11083 3953;3954;6847 4 RNTSMEPAAETGKPPTVK INLLTHHRRNTSMEPA TGKPPTVKSPPTVKLP R R N V K S 2 1 1 0 0 0 2 1 0 0 0 2 1 0 3 1 3 0 0 1 0 0 18 2 1912.9677 D6RHU4;Q53FE4 D6RHU4 233 250 C4orf17 Uncharacterized protein C4orf17 yes no 2 0.010499 55.899 By MS/MS By matching 1 1 5819300 3577000 2242200 4824 682 5376 12094;12095 11087 11087 1205;6399;6400 1 RPAAAAAAGSASPR PGRKGSGKRPAAAAAA AAGSASPRSWDEAEAQ K R P P R S 7 2 0 0 0 0 0 1 0 0 0 0 0 0 2 2 0 0 0 0 0 0 14 1 1252.6636 Q96S55 Q96S55 142 155 WRNIP1 ATPase WRNIP1 yes yes 2 4.9813E-05 118.52 By MS/MS By MS/MS 1 1 45459000 18017000 27442000 4825 2538 5377 12096;12097 11088;11089 11088 5117;5118 2 RPAEATSSPTSPERPR KKKDKEHRRPAEATSS PTSPERPRHHHHDSDS R R P P R H 2 3 0 0 0 0 2 0 0 0 0 0 0 0 4 3 2 0 0 0 0 0 16 2 1737.8758 Q9BU76 Q9BU76 210 225 MMTAG2 Multiple myeloma tumor-associated protein 2 yes yes 3 0.00075637 80.596 By MS/MS By MS/MS 1 1 76013000 29402000 46611000 4826 2582 5378 12098;12099 11090;11091 11091 5218;5219 2 RPASPSSPEHLPATPAESPAQR LNKLKSPKRPASPSSP PAESPAQRFEARIEDG K R P Q R F 4 2 0 0 0 1 2 0 1 0 1 0 0 0 6 4 1 0 0 0 0 0 22 1 2282.1404 Q9H7L9 Q9H7L9 231 252 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 3 0.0017677 54.225 By MS/MS By MS/MS 1 1 74374000 34921000 39453000 4827 2674 5379 12100;12101 11092;11093 11092 5450;5451;5452 2 RPASQKDSGAASEQATAAPNPCSSSSR APVSGEKRRPASQKDS NPCSSSSRTTRRKK__ R R P S R T 6 2 1 1 1 2 1 1 0 0 0 1 0 0 3 7 1 0 0 0 0 0 27 2 2717.2423 Q9BU23 Q9BU23 675 701 LMF2 Lipase maturation factor 2 yes yes 3 0.016223 45.269 By MS/MS By matching 1 1 13942000 7548000 6394400 4828 2581 5380 12102;12103 11094 11094 5215;5216 1 RPASVSSSAAVEHEQR PTDLGAHKRPASVSSS AAVEHEQREAAAKEKQ K R P Q R E 3 2 0 0 0 1 2 0 1 0 0 0 0 0 1 4 0 0 0 2 0 0 16 1 1709.8445 Q7Z5L9 Q7Z5L9 237 252 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 4.5641E-05 104.2 By MS/MS By MS/MS 1 1 33306000 18872000 14434000 4829 2221 5381 12104;12105 11095;11096 11096 4446;4447 2 RPATADSPKPSAK PPPRASSKRPATADSP DSPKPSAKKQKKSSSK K R P A K K 3 1 0 1 0 0 0 0 0 0 0 2 0 0 3 2 1 0 0 0 0 0 13 2 1324.7099 Q03111 Q03111 286 298 MLLT1 Protein ENL yes yes 3 0.0015057 87.647 By MS/MS By MS/MS 1 1 34689000 15034000 19655000 4830 1844 5382 12106;12107 11097;11098 11097 3463;3464 2 RPDDVPLSLSPSKR RARLAALKRPDDVPLS LSLSPSKRACASPSAQ K R P K R A 0 2 0 2 0 0 0 0 0 0 2 1 0 0 3 3 0 0 0 1 0 0 14 2 1565.8526 F8WDB4;Q9UFC0 F8WDB4 82 95 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 0.00080611 89.507 By MS/MS By MS/MS 1 1 18004000 9378500 8625900 4831 950 5383 12108;12109 11099;11100 11100 1723 2 RPDHSGGSPSPPTSEPAR EVAPPAHRRPDHSGGS PPTSEPARSGHRGNRA R R P A R S 1 2 0 1 0 0 1 2 1 0 0 0 0 0 5 4 1 0 0 0 0 0 18 1 1830.8609 Q8TAD8 Q8TAD8 45 62 SNIP1 Smad nuclear-interacting protein 1 yes yes 3 0.006594 49.433 By MS/MS By MS/MS 1 1 10990000 4380400 6609800 4832 2367 5384 12110;12111 11101;11102 11102 4744;4745 2 RPDLEIYKPGLSR ARPRKDNRRPDLEIYK IYKPGLSRLRNKPKIK R R P S R L 0 2 0 1 0 0 1 1 0 1 2 1 0 0 2 1 0 0 1 0 0 0 13 2 1542.8518 Q86US8 Q86US8 46 58 SMG6 Telomerase-binding protein EST1A yes yes 3 0.027532 42.426 By MS/MS 1 1264200 0 1264200 4833 2237 5385 12112 11103 11103 7770 1 RPDPDSDEDEDYER HEASGFARRPDPDSDE DEDEDYERERRKRSMG R R P E R E 0 2 0 5 0 0 3 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 14 1 1736.6762 H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010 H0Y6J6 57 70 RBM17 Splicing factor 45 yes no 2;3 1.1647E-11 129.84 By MS/MS By MS/MS 2 2 55459000 29951000 25508000 4834 1032 5386 12113;12114;12115;12116 11104;11105;11106;11107 11107 1921 4 RPDPDSDEDEDYERER HEASGFARRPDPDSDE DEDYERERRKRSMGGA R R P E R R 0 3 0 5 0 0 4 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 16 2 2021.8199 H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010 H0Y6J6 57 72 RBM17 Splicing factor 45 yes no 3 0.00012671 95.554 By MS/MS By MS/MS 1 1 81213000 45649000 35564000 4835 1032 5387 12117;12118 11108;11109 11109 1921 2 RPDSPTRPTLR APSQGKERRPDSPTRP SPTRPTLRGSEEPTLK R R P L R G 0 3 0 1 0 0 0 0 0 0 1 0 0 0 3 1 2 0 0 0 0 0 11 2 1294.7106 Q7RTP6 Q7RTP6 1646 1656 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 3 0.017532 60.064 By MS/MS 1 11767000 11767000 0 4836 2205 5388 12119 11110 11110 4396 1 RPDYAPMESSDEEDEEFQFIK VKRYVSGKRPDYAPME DEEFQFIKKAKEQEAE K R P I K K 1 1 0 3 0 1 5 0 0 1 0 1 1 2 2 2 0 0 1 0 0 0 21 1 2561.0904 P55081 P55081 44 64 MFAP1 Microfibrillar-associated protein 1 yes yes 3 0.031173 40.097 By MS/MS 1 0 0 0 4837 1772 5389 12120 11111 11111 3341;3342 1 RPDYAPMESSDEEDEEFQFIKK VKRYVSGKRPDYAPME EEFQFIKKAKEQEAEP K R P K K A 1 1 0 3 0 1 5 0 0 1 0 2 1 2 2 2 0 0 1 0 0 0 22 2 2689.1854 P55081 P55081 44 65 MFAP1 Microfibrillar-associated protein 1 yes yes 3 3.5068E-05 76.329 By MS/MS By MS/MS 2 2 53856000 27689000 26167000 4838 1772 5390;5391 12121;12122;12123;12124 11112;11113 11112 224 3341;3342 2 RPEGPGAQAPSSPR LTDSGPERRPEGPGAQ AQAPSSPRVTEAPCYP R R P P R V 2 2 0 0 0 1 1 2 0 0 0 0 0 0 4 2 0 0 0 0 0 0 14 1 1405.7062 P40222 P40222 504 517 TXLNA Alpha-taxilin yes yes 2;3 0.00026284 92.236 By MS/MS By MS/MS 2 2 177320000 93941000 83378000 4839 1684 5392 12125;12126;12127;12128 11114;11115;11116;11117 11117 3097;3098 4 RPESPSEISPIK TWNSQFGKRPESPSEI PSEISPIKGSVRTGLF K R P I K G 0 1 0 0 0 0 2 0 0 2 0 1 0 0 3 3 0 0 0 0 0 0 12 1 1338.7143 Q7Z5K2 Q7Z5K2 218 229 WAPAL Wings apart-like protein homolog yes yes 2 2.8534E-10 152.11 By MS/MS By MS/MS 1 1 19542000 11191000 8350400 4840 2220 5393 12129;12130 11118;11119 11119 4440 2 RPGAPSLSPAPR PPPARSPRRPGAPSLS PSLSPAPRSGELGLPG R R P P R S 2 2 0 0 0 0 0 1 0 0 1 0 0 0 4 2 0 0 0 0 0 0 12 1 1204.6677 Q5QP82 Q5QP82 56 67 DCAF10 DDB1- and CUL4-associated factor 10 yes yes 2 0.0011539 107.97 By MS/MS By matching 1 1 15277000 8114700 7162500 4841 2082 5394 12131;12132 11120 11120 4101;4102 1 RPGFSPTSHR FQPSSPTRRPGFSPTS GFSPTSHRLLPTP___ R R P H R L 0 2 0 0 0 0 0 1 1 0 0 0 0 1 2 2 1 0 0 0 0 0 10 1 1140.5788 Q8WUA4;H0Y4Q6 Q8WUA4 897 906 GTF3C2 General transcription factor 3C polypeptide 2 yes no 3 0.0056371 66.004 By MS/MS 1 0 0 0 4842 2399 5395 12133 11121 11121 4796 1 RPGPGTLYDVPR YDVPPGLRRPGPGTLY GTLYDVPRERVLPPEV R R P P R E 0 2 0 1 0 0 0 2 0 0 1 0 0 0 3 0 1 0 1 1 0 0 12 1 1326.7044 P56945;H3BN62 P56945 380 391 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 2;3 1.6755E-07 124.12 By MS/MS By MS/MS 2 2 22461000 11923000 10538000 4843 1779 5396 12134;12135;12136;12137 11122;11123;11124 11122 7650 3 RPGQSFHVNSEVNSVLSPR SQPIMVQRRPGQSFHV VNSVLSPRSESGGLGV R R P P R S 0 2 2 0 0 1 1 1 1 0 1 0 0 1 2 4 0 0 0 3 0 0 19 1 2109.0715 Q5T1Z4;Q5T1Z8;Q14671;H0YEH2 Q5T1Z4 193 211 PUM1 Pumilio homolog 1 yes no 3 0.0029797 55.846 By MS/MS By MS/MS 1 1 11344000 5123300 6221000 4844 1950 5397 12138;12139 11125;11126 11125 3765 2 RPHFPQFSYSASGRE MDCMDNERRPHFPQFS SYSASGRE________ R R P R E - 1 2 0 0 0 1 1 1 1 0 0 0 0 2 2 3 0 0 1 0 0 0 15 2 1764.8332 Q9Y243 Q9Y243 465 479 AKT3 RAC-gamma serine/threonine-protein kinase yes yes 3 0.0043999 65.765 By MS/MS By MS/MS 1 1 13736000 6624000 7112200 4845 2883 5398 12140;12141 11127;11128 11127 6015;6016;6017 2 RPILQLSPPGPR KSRAVPGRRPILQLSP QLSPPGPRGSTPGRDP R R P P R G 0 2 0 0 0 1 0 1 0 1 2 0 0 0 4 1 0 0 0 0 0 0 12 1 1329.7881 Q8N3X1;F5GXL1 Q8N3X1 12 23 FNBP4 Formin-binding protein 4 yes no 2;3 0.0028779 90.689 By MS/MS By MS/MS 3 2 29386000 18324000 11063000 4846 2308 5399 12142;12143;12144;12145;12146 11129;11130;11131;11132;11133;11134 11133 4639 6 RPISDDDCPSASK KQPSGTTKRPISDDDC DDCPSASKVYKASDSA K R P S K V 1 1 0 3 1 0 0 0 0 1 0 1 0 0 2 3 0 0 0 0 0 0 13 1 1446.6409 Q96PU4 Q96PU4 664 676 UHRF2 E3 ubiquitin-protein ligase UHRF2 yes yes 2 0.011244 72.797 By MS/MS By matching 1 1 6826400 2957100 3869200 4847 2525 5400 12147;12148 11135 11135 5100 1 RPKEEEWDPEYTPK NSNTTFQKRPKEEEWD WDPEYTPKSKKYFLHD K R P P K S 0 1 0 1 0 0 4 0 0 0 0 2 0 0 3 0 1 1 1 0 0 0 14 2 1802.8475 Q9NYF8;H0YF14 Q9NYF8 829 842 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0024266 86.262 By MS/MS By MS/MS 1 1 9996400 5043700 4952800 4848 2759 5401 12149;12150 11136;11137 11136 7073 1 RPMASEVPYASGMPIKK SSAASGIKRPMASEVP ASGMPIKKIGHRSVDS K R P K K I 2 1 0 0 0 0 1 1 0 1 0 2 2 0 3 2 0 0 1 1 0 0 17 2 1860.959 A6PW57;A2A5X0 A6PW57 35 51 PIP5K1A yes no 3 0.015961 45.14 By MS/MS 1 1977300 1977300 0 4849 427 5402 12151 11138 11138 7265 1 RPMEEDGEEKSPSK TYAITPMKRPMEEDGE GEEKSPSKKKKKIQKK K R P S K K 0 1 0 1 0 0 4 1 0 0 0 2 1 0 2 2 0 0 0 0 0 0 14 2 1617.7305 Q12906 Q12906 372 385 ILF3 Interleukin enhancer-binding factor 3 yes yes 2;3 2.6257E-09 129.17 By MS/MS By MS/MS 4 3 228560000 138810000 89748000 4850 1884 5403;5404 12152;12153;12154;12155;12156;12157;12158 11139;11140;11141;11142;11143;11144;11145 11144 246 3587 7 RPMSSPEMK SGTKPANKRPMSSPEM PMSSPEMKSAPKKSKA K R P M K S 0 1 0 0 0 0 1 0 0 0 0 1 2 0 2 2 0 0 0 0 0 0 9 1 1061.4998 P51610;A6NEM2;H7C1C4 P51610 2016 2024 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.0039566 131.42 By MS/MS By MS/MS 2 2 40189000 21222000 18967000 4851 1745 5405;5406 12159;12160;12161;12162 11146;11147;11148 11147 219 3299;3300 3 RPNEDSDEDEEK AVLTKAVKRPNEDSDE DSDEDEEKGAVVPPVH K R P E K G 0 1 1 3 0 0 4 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 12 1 1461.5856 H0YE74;Q12996 H0YE74 60 71 CSTF3 Cleavage stimulation factor subunit 3 yes no 2 0.0022714 102.15 By MS/MS By MS/MS 1 1 11422000 5875200 5546700 4852 1068 5407 12163;12164 11149;11150 11149 1972 1 RPNEDSDEDEEKGAVVPPVHDIYR AVLTKAVKRPNEDSDE PPVHDIYRARQQKRIR K R P Y R A 1 2 1 4 0 0 4 1 1 1 0 1 0 0 3 1 0 0 1 3 0 0 24 2 2765.2893 H0YE74;Q12996 H0YE74 60 83 CSTF3 Cleavage stimulation factor subunit 3 yes no 3;4 2.6598E-06 77.576 By MS/MS By MS/MS 2 2 296220000 180050000 116170000 4853 1068 5408 12165;12166;12167;12168 11151;11152;11153 11152 1972 3 RPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLR PTQQAVARRPPGGTSP AAAGSGLRRGAEGILA R R P L R R 9 2 1 0 1 0 0 9 0 0 4 0 0 0 12 4 2 0 0 1 0 0 45 1 4023.0749 Q8WWM7;H3BUF6 Q8WWM7 26 70 ATXN2L Ataxin-2-like protein yes no 4 0.024881 43.655 By MS/MS 1 6189600 0 6189600 4854 2409 5409 12169 11154 11154 1 RPPSPDVIVLSDNEQPSSPR HSDMKSERRPPSPDVI NEQPSSPRVNGLTTVA R R P P R V 0 2 1 2 0 1 1 0 0 1 1 0 0 0 5 4 0 0 0 2 0 0 20 1 2189.1077 Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4 97 116 GATAD2A Transcriptional repressor p66-alpha yes no 2;3 1.2041E-34 141.12 By MS/MS By MS/MS 3 3 89383000 50747000 38637000 4855 2256 5410;5411 12170;12171;12172;12173;12174;12175 11155;11156;11157;11158;11159;11160;11161 11157 4524;4525;4526;4527 7 RPPSPEPSTK QEEEERKRRPPSPEPS PSPEPSTKVSEEAESQ R R P T K V 0 1 0 0 0 0 1 0 0 0 0 1 0 0 4 2 1 0 0 0 0 0 10 1 1094.572 A0A087WUZ3;Q01082 A0A087WUZ3 2101 2110 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2;3 3.7633E-05 131.32 By MS/MS By MS/MS 3 2 80789000 40400000 40389000 4856 53 5412 12176;12177;12178;12179;12180 11162;11163;11164;11165;11166;11167;11168;11169;11170;11171 11169 98 10 RPPSVGDVFHGISK SQFRVSSKRPPSVGDV DVFHGISKEDHRHSAP K R P S K E 0 1 0 1 0 0 0 2 1 1 0 1 0 1 2 2 0 0 0 2 0 0 14 1 1494.7943 E7EUR8;A0A1B0GVL4;P78312;D6RFZ4 E7EUR8 493 506 FAM193A Protein FAM193A yes no 3 0.00080082 77.027 By MS/MS By MS/MS 1 1 1359500 0 1359500 4857 379 5413 12181;12182 11172;11173 11173 718 2 RPPTPCSDPER LDLTKKGKRPPTPCSD TPCSDPERKRFRFNSE K R P E R K 0 2 0 1 1 0 1 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 11 1 1310.6037 Q9BW71 Q9BW71 81 91 HIRIP3 HIRA-interacting protein 3 yes yes 2 4.1638E-05 123.68 By MS/MS By MS/MS 2 3 36097000 21901000 14195000 4858 2589 5414;5415 12183;12184;12185;12186;12187 11174;11175;11176;11177 11175 5242;7029 4 RPRDSPTLSNSGIR ERVVERRRRPRDSPTL TLSNSGIRATSRTAKQ R R P I R A 0 3 1 1 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 0 0 0 14 2 1554.8227 Q9HD20 Q9HD20 895 908 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 3 0.0033032 68.044 By matching By MS/MS 1 1 6187300 3452400 2734900 4859 2699 5416 12188;12189 11178 11178 5507 1 RPSASSPNNNTAAK PGVFLTQRRPSASSPN PNNNTAAKGKRTKKGM R R P A K G 3 1 3 0 0 0 0 0 0 0 0 1 0 0 2 3 1 0 0 0 0 0 14 1 1413.6961 O75151;E7ET14;A0A087WW48 O75151 1054 1067 PHF2 Lysine-specific demethylase PHF2 yes no 2 0.0041465 82.515 By MS/MS By matching 1 1 11189000 5285100 5904300 4860 1430 5417 12190;12191 11179 11179 2637 1 RPSEGPQPLVR RPRSIVSRRPSEGPQP EGPQPLVRRKMTGSRD R R P V R R 0 2 0 0 0 1 1 1 0 0 1 0 0 0 3 1 0 0 0 1 0 0 11 1 1234.6782 Q5T5Y3 Q5T5Y3 627 637 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 2 0.0078196 83.204 By MS/MS By matching 1 1 12374000 5928500 6445200 4861 2099 5418 12192;12193 11180 11180 4155 1 RPSLGELLLR SDPLVKSRRPSLGELL SLGELLLRHAHSPTRA R R P L R H 0 2 0 0 0 0 1 1 0 0 4 0 0 0 1 1 0 0 0 0 0 0 10 1 1152.6979 Q8N612 Q8N612 857 866 FAM160A2 FTS and Hook-interacting protein yes yes 2 0.0047014 91.202 By MS/MS By MS/MS 1 1 3536500 1749700 1786800 4862 2320 5419 12194;12195 11181;11182;11183 11181 4657 3 RPSPQPSPR SYSPVERRRPSPQPSP PSPQPSPRDQQSSSSE R R P P R D 0 2 0 0 0 1 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 9 1 1020.5465 Q9UQ35;I3L4U6 Q9UQ35 2700 2708 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 0.003317 94.402 By MS/MS By MS/MS 2 2 57589000 29715000 27874000 4863 2877 5420 12196;12197;12198;12199 11184;11185;11186;11187;11188 11186 5964;5965 5 RPSQEQSASASSGQPQAPLNR EKAEERPRRPSQEQSA QPQAPLNRERPESPMV R R P N R E 3 2 1 0 0 4 1 1 0 0 1 0 0 0 3 5 0 0 0 0 0 0 21 1 2195.0679 A0A0A0MT60;Q5T1M5 A0A0A0MT60 979 999 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 3 1.6959E-06 84.208 By MS/MS By MS/MS 1 1 35639000 15072000 20567000 4864 238 5421 12200;12201 11189;11190 11189 428;429 2 RPSQNAISFFNVGHSK SNSPISQRRPSQNAIS FFNVGHSKLQSLSKRT R R P S K L 1 1 2 0 0 1 0 1 1 1 0 1 0 2 1 3 0 0 0 1 0 0 16 1 1787.9067 Q9BXB4 Q9BXB4 187 202 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 3 4.505E-10 121.47 By MS/MS By MS/MS 1 1 17946000 10664000 7281900 4865 2597 5422 12202;12203 11191;11192 11191 5258 2 RPSSPVISK EFSGGIPKRPSSPVIS PSSPVISKTATKAYPQ K R P S K T 0 1 0 0 0 0 0 0 0 1 0 1 0 0 2 3 0 0 0 1 0 0 9 1 969.56073 Q96T17 Q96T17 287 295 MAP7D2 MAP7 domain-containing protein 2 yes yes 2 0.0037902 123.01 By MS/MS By matching 1 1 8163800 3953600 4210200 4866 2543 5423 12204;12205 11193 11193 5133 1 RPSVGSQSNQAGQGK PGVFLTQRRPSVGSQS SNQAGQGKRPKKGLAT R R P G K R 1 1 1 0 0 3 0 3 0 0 0 1 0 0 1 3 0 0 0 1 0 0 15 1 1499.7441 Q9UPP1;H0Y3N9 Q9UPP1 1019 1033 PHF8 Histone lysine demethylase PHF8 yes no 2 0.0026426 81.327 By MS/MS By MS/MS 2 2 11056000 4134700 6921000 4867 2868 5424 12206;12207;12208;12209 11194;11195;11196;11197 11196 5911;5912 4 RPSVSKEGR HQHSAQVKRPSVSKEG PSVSKEGRKTSIKSHM K R P G R K 0 2 0 0 0 0 1 1 0 0 0 1 0 0 1 2 0 0 0 1 0 0 9 2 1014.557 H7BXI1;A0A087WXU3;A0FGR8 H7BXI1 637 645 ESYT2 Extended synaptotagmin-2 yes no 3 0.004926 80.69 By MS/MS By matching 1 1 13116000 7963600 5152800 4868 89 5425 12210;12211 11198 11198 166 1 RPTETNPVTSNSDEECNETVK RVKTTPLRRPTETNPV EECNETVKEKQKLSVP R R P V K E 0 1 3 1 1 0 4 0 0 0 0 1 0 0 2 2 4 0 0 2 0 0 21 1 2406.0605 P46100;A0A096LNL9;A0A096LNW1 P46100 666 686 ATRX Transcriptional regulator ATRX yes no 3 0.012555 42.923 By MS/MS 1 4758100 4758100 0 4869 1708 5426 12212 11199 11199 3165 1 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK KHRRTYARRPTPNDDT EHIPSPAKKVPRLPAT R R P A K K 2 1 2 3 0 0 2 2 2 2 2 1 0 0 4 2 3 0 0 2 0 0 30 1 3179.5847 Q01581 Q01581 469 498 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 4 1.2923E-30 103.57 By MS/MS By MS/MS 1 1 35004000 17263000 17741000 4870 1831 5427 12213;12214 11200;11201 11201 3429 2 RPTSVPSR R P S R 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 1 0 0 8 1 898.49846 REV__E9PK97 yes yes 2 0.015393 129 By MS/MS By MS/MS 2 2 449990000 275100000 174890000 + 4871 2974 5428 12215;12216;12217;12218 11202;11203 11203 6161 2 RQDPQVVSPFSR DQEKCTVRRQDPQVVS QVVSPFSRGKQNHVLK R R Q S R G 0 2 0 1 0 2 0 0 0 0 0 0 0 1 2 2 0 0 0 2 0 0 12 1 1414.7317 Q12986 Q12986 319 330 NFX1 Transcriptional repressor NF-X1 yes yes 2 0.030709 64.65 By matching By MS/MS 1 1 5885000 2451300 3433700 4872 1889 5429 12219;12220 11204 11204 1 RQDSDLVQCGVTSPSSAEATGK HSVIQLARRQDSDLVQ SSAEATGKLAVDTFPA R R Q G K L 2 1 0 2 1 2 1 2 0 0 1 1 0 0 1 4 2 0 0 2 0 0 22 1 2292.0652 Q9HC52 Q9HC52 253 274 CBX8 Chromobox protein homolog 8 yes yes 3 8.6944E-10 95.287 By MS/MS By MS/MS 2 2 26170000 14154000 12016000 4873 2691 5430 12221;12222;12223;12224 11205;11206;11207 11207 5489;5490 3 RQDSMEALQMDR RPAPPRVKRQDSMEAL MEALQMDRSGSGKTVS K R Q D R S 1 2 0 2 0 2 1 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 12 1 1478.6606 Q8TDR0 Q8TDR0 473 484 TRAF3IP1 TRAF3-interacting protein 1 yes yes 2 0.0029416 97.767 By MS/MS By MS/MS 1 1 41085000 25038000 16047000 4874 2382 5431 12225;12226 11208;11209 11208 4766 2 RQPPVSPLTLSPGPEAHQGFSR NLSGPSRRRQPPVSPL EAHQGFSRQLSSTSPL R R Q S R Q 1 2 0 0 0 2 1 2 1 0 2 0 0 1 5 3 1 0 0 1 0 0 22 1 2357.224 Q6UUV7 Q6UUV7 386 407 CRTC3 CREB-regulated transcription coactivator 3 yes yes 3 0.0041382 54.225 By MS/MS By matching 1 1 3802800 2131000 1671800 4875 2169 5432 12227;12228 11210 11210 4334;4335;6920 1 RQQKISK KQPTDMARRQQKISKQ RRQQKISKQQLQTVKD R R Q S K Q 0 1 0 0 0 2 0 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 7 2 886.53485 F1T0E5;Q9ULU8 F1T0E5 144 150 CADPS Calcium-dependent secretion activator 1 yes no 2 0.023187 49.536 By MS/MS 1 0 0 0 4876 845 5433 12229 11211 11211 1 RQQPPLGPSSSLLSLPGLK RAIHEERRRQQPPLGP LLSLPGLKSRGSRAAG R R Q L K S 0 1 0 0 0 2 0 2 0 0 5 1 0 0 4 4 0 0 0 0 0 0 19 1 1974.1262 Q4KMP7 Q4KMP7 648 666 TBC1D10B TBC1 domain family member 10B yes yes 3 0.00025468 72.99 By MS/MS By MS/MS 3 2 13882000 8305200 5576700 4877 2047 5434;5435 12230;12231;12232;12233;12234 11212;11213;11214 11214 4008;4009;4010 3 RQSFASLALR ________________ SFASLALRKRYSYLTE R R Q L R K 2 2 0 0 0 1 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 10 1 1147.6462 H0YA66;H0Y3A4;A0A087WZ65;A0A087WTF3;Q12955 H0YA66 8 17 ANK3 Ankyrin-3 yes no 2 0.010297 78.964 By MS/MS By MS/MS 1 1 12104000 7348500 4755600 4878 1013 5436 12235;12236 11215;11216 11216 1869 2 RQSILFSTEV AIPAPDSKRQSILFST SILFSTEV________ K R Q E V - 0 1 0 0 0 1 1 0 0 1 1 0 0 1 0 2 1 0 0 1 0 0 10 1 1178.6295 P11274 P11274 1262 1271 BCR Breakpoint cluster region protein yes yes 2 0.00050559 111.52 By matching By MS/MS 1 1 13366000 8727300 4639200 4879 1562 5437 12237;12238 11217 11217 2867 1 RQSIPEEFK PDGALAVRRQSIPEEF QSIPEEFKGSTVVELM R R Q F K G 0 1 0 0 0 1 2 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 9 1 1132.5877 F5H4N6;Q9Y3R0;F5H3G9 F5H4N6 41 49 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.0063692 98.105 By MS/MS By MS/MS 1 1 12052000 6488700 5563100 4880 885 5438 12239;12240 11218;11219 11218 1593 2 RQSLELQKCEEILHK LQTKRSSRRQSLELQK KCEEILHKIVKYRFSW R R Q H K I 0 1 0 0 1 2 3 0 1 1 3 2 0 0 0 1 0 0 0 0 0 0 15 2 1910.0044 Q9UIG0 Q9UIG0 1340 1354 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 4 0.00053975 75.91 By matching By MS/MS 1 1 5611600 1685500 3926100 4881 2817 5439 12241;12242 11220;11221 11221 5791 2 RQSLYENQV LKELKSKKRQSLYENQ QSLYENQV________ K R Q Q V - 0 1 1 0 0 2 1 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 9 1 1135.5622 Q9BY89;A0A1B0GVJ7 Q9BY89 1798 1806 KIAA1671 Uncharacterized protein KIAA1671 yes no 2 0.014829 80.979 By MS/MS By MS/MS 1 1 4888400 2989800 1898700 4882 2604 5440 12243;12244 11222;11223 11222 5272 2 RQSPEPSPVTLGR ESKRRCRKRQSPEPSP PSPVTLGRRSSGRQGG K R Q G R R 0 2 0 0 0 1 1 1 0 0 1 0 0 0 3 2 1 0 0 1 0 0 13 1 1422.7579 Q9NRL2 Q9NRL2 1411 1423 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 3 0.00086655 81.278 By MS/MS By MS/MS 1 1 11202000 5387000 5815400 4883 2721 5441 12245;12246 11224;11225 11225 5560 2 RQSPSPSTRPIR GASSSPQRRQSPSPST SPSTRPIRRVSRTPEP R R Q I R R 0 3 0 0 0 1 0 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 12 2 1380.7586 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 720 731 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0074174 82.515 By MS/MS By matching 1 1 38467000 20261000 18206000 4884 442 5442 12247;12248 11226 11226 851;852 1 RQSSGSATNVASTPDNR SLGRIRTRRQSSGSAT VASTPDNRGRSRAKVV R R Q N R G 2 2 2 1 0 1 0 1 0 0 0 0 0 0 1 4 2 0 0 1 0 0 17 1 1746.8245 Q7Z460;H0Y5T1;F8WA11 Q7Z460 644 660 CLASP1 CLIP-associating protein 1 yes no 2;3 7.9528E-06 96.096 By MS/MS By MS/MS 3 3 35935000 17106000 18829000 4885 2217 5443;5444 12249;12250;12251;12252;12253;12254 11227;11228;11229;11230;11231 11228 4424;4425;4426 5 RQSSSYDDPWK ATTAIEIRRQSSSYDD SSYDDPWKITDEQRQY R R Q W K I 0 1 0 2 0 1 0 0 0 0 0 1 0 0 1 3 0 1 1 0 0 0 11 1 1367.6106 E9PMG1;H0YDT0;Q96D71;H0YCF0;H7C1V2 E9PMG1 270 280 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 2 0.0022313 73.36 By MS/MS By MS/MS 1 1 4852600 2252600 2599900 4886 828 5445 12255;12256 11232;11233 11232 1479;1480;1481;7391 2 RQSSSYDDPWKITDEQR ATTAIEIRRQSSSYDD WKITDEQRQYYVNQFK R R Q Q R Q 0 2 0 3 0 2 1 0 0 1 0 1 0 0 1 3 1 1 1 0 0 0 17 2 2109.9716 E9PMG1;H0YDT0;Q96D71;H0YCF0;H7C1V2 E9PMG1 270 286 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 3 0.0094326 54.117 By MS/MS By matching 1 1 13525000 6984500 6540400 4887 828 5446 12257;12258 11234 11234 1479;1480;1481;7391 1 RQSVGDFVSGALNK PGEYKRKRRQSVGDFV FVSGALNKFKPNRTPS R R Q N K F 1 1 1 1 0 1 0 2 0 0 1 1 0 1 0 2 0 0 0 2 0 0 14 1 1476.7685 Q6P4F7;H3BR51 Q6P4F7 283 296 ARHGAP11A Rho GTPase-activating protein 11A yes no 2 0.0017865 96.096 By MS/MS By MS/MS 1 1 10248000 5338700 4909300 4888 2154 5447 12259;12260 11235;11236 11235 4292 2 RRDEDMLYSPELAQR FALDLPPRRRDEDMLY YSPELAQRGHDDDVSS R R R Q R G 1 3 0 2 0 1 2 0 0 0 2 0 1 0 1 1 0 0 1 0 0 0 15 2 1877.9054 Q9Y2W2 Q9Y2W2 229 243 WBP11 WW domain-binding protein 11 yes yes 3 0.0084526 58.693 By MS/MS By matching 1 1 18288000 9945300 8342600 4889 2898 5448 12261;12262 11237 11237 6040 1 RRDSDGVDGFEAEGK NIHNNRKRRRDSDGVD DGFEAEGKKDKKDYDN R R R G K K 1 2 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 15 2 1636.7441 Q96KR1 Q96KR1 1051 1065 ZFR Zinc finger RNA-binding protein yes yes 3 0.00038612 85.976 By MS/MS By MS/MS 1 1 43538000 20534000 23003000 4890 2513 5449 12263;12264 11238;11239 11238 5075 2 RREEGPPPPSPDGASSDAEPEPPSGR GTQPSTARRREEGPPP EPEPPSGRTESPATAA R R R G R T 2 3 0 2 0 0 4 3 0 0 0 0 0 0 8 4 0 0 0 0 0 0 26 2 2670.227 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 13 38 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 0.030186 40.83 By MS/MS 1 12827000 12827000 0 4891 542 5450 12265 11240 11240 991 1 RRGSSGSVDETLFALPAASEPVIR PSTPAAPKRRGSSGSV AASEPVIRSSAENMDL K R R I R S 3 3 0 1 0 0 2 2 0 1 2 0 0 1 2 4 1 0 0 2 0 0 24 2 2514.319 Q9NQC3 Q9NQC3 178 201 RTN4 Reticulon-4 yes yes 3 0.00024413 67.563 By MS/MS By matching 1 1 5892900 2564000 3328900 4892 2707 5451 12266;12267 11241 11241 5519;5520;5521 1 RRHSEVETDSK HVGAGKRKRRHSEVET SEVETDSKKKKMKLPE K R R S K K 0 2 0 1 0 0 2 0 1 0 0 1 0 0 0 2 1 0 0 1 0 0 11 2 1342.6589 Q9NX58 Q9NX58 273 283 LYAR Cell growth-regulating nucleolar protein yes yes 3 0.015906 61.423 By matching By MS/MS 1 1 4183000 1422400 2760700 4893 2750 5452 12268;12269 11242 11242 5625 1 RRPSALEADSPMAPK RWPMEKKRRRPSALEA ADSPMAPKRGTKRQRQ R R R P K R 3 2 0 1 0 0 1 0 0 0 1 1 1 0 3 2 0 0 0 0 0 0 15 2 1624.8355 A0A0C4DGP2;A0A0C4DGP5;Q86Y91 A0A0C4DGP2 642 656 KIF18B Kinesin-like protein;Kinesin-like protein KIF18B yes no 3 0.0016792 73.156 By MS/MS By MS/MS 1 1 5657800 3150300 2507400 4894 296 5453 12270;12271 11243;11244 11243 529 1 RRPSDENTIAPSEVQK NFEPNCLRRRPSDENT IAPSEVQKWTNHRVME R R R Q K W 1 2 1 1 0 1 2 0 0 1 0 1 0 0 2 2 1 0 0 1 0 0 16 2 1825.9282 Q86W92;F5GZP6 Q86W92 791 806 PPFIBP1 Liprin-beta-1 yes no 2 0.03128 43.791 By MS/MS 1 0 0 0 4895 2247 5454 12272 11245 11245 1 RRPSPQPSPR LSYSPVERRRPSPQPS PSPQPSPRDQQSSSSE R R R P R D 0 3 0 0 0 1 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 10 2 1176.6476 Q9UQ35;I3L4U6 Q9UQ35 2699 2708 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0060834 73.082 By MS/MS By MS/MS 1 1 86928000 48628000 38300000 4896 2877 5455 12273;12274 11246;11247 11246 5964;5965 2 RRQEELNNQLFLYDTHQNLR YSSCRQLRRRQEELNN YDTHQNLRNANRDALV R R R L R N 0 3 3 1 0 3 2 0 1 0 4 0 0 1 0 0 1 0 1 0 0 0 20 2 2586.3051 A0A0A0MRF9;P16885 A0A0A0MRF9 1205 1224 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 4 0.020592 46.159 By MS/MS 1 2694900 0 2694900 4897 183 5456 12275 11248 11248 7197 0 RRSAEDELAMR NLPGGELRRRSAEDEL AEDELAMRGFLQEGDL R R R M R G 2 3 0 1 0 0 2 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 11 2 1332.6568 Q13868;A3KFL1;A3KFL5;A3KFL2 Q13868 122 132 EXOSC2 Exosome complex component RRP4 yes no 3 0.024197 56.551 By MS/MS By matching 1 1 4376300 2167100 2209200 4898 1933 5457 12276;12277 11249 11249 3730 1 RRSFSISPVR RRSRSVVRRRSFSISP SFSISPVRLRRSRTPL R R R V R L 0 3 0 0 0 0 0 0 0 1 0 0 0 1 1 3 0 0 0 1 0 0 10 2 1203.6836 P18583;H7C1M2;H7C2G8 P18583 2007 2016 SON Protein SON yes no 2 0.015802 59.796 By matching By MS/MS 1 1 115920000 69458000 46464000 4899 1600 5458 12278;12279 11250 11250 2940;2941;2942 1 RRSIQDLTVTGTEPGQVSSR TTGNGQPRRRSIQDLT EPGQVSSRSSSPSVRM R R R S R S 0 3 0 1 0 2 1 2 0 1 1 0 0 0 1 3 3 0 0 2 0 0 20 2 2186.1404 Q9UG54;O43318 Q9UG54 91 110 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 3 0.0036377 60.332 By MS/MS By MS/MS 1 1 72854000 46593000 26261000 4900 1379 5459 12280;12281 11251;11252 11252 2525;6609 2 RRSPPADAIPK MSPKRIAKRRSPPADA PPADAIPKSKKVKDTR K R R P K S 2 2 0 1 0 0 0 0 0 1 0 1 0 0 3 1 0 0 0 0 0 0 11 2 1206.6833 M0R1Q8;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4;C9JW69;P18754 M0R1Q8 111 121 RCC1 Regulator of chromosome condensation yes no 3 0.00010631 113.76 By MS/MS By MS/MS 1 1 83319000 36595000 46724000 4901 558 5460 12282;12283 11253;11254;11255;11256;11257 11257 1029 5 RRSPPPGPDGHAK QQLEKKQRRRSPPPGP PGPDGHAKKMRPGEAT R R R A K K 1 2 0 1 0 0 0 2 1 0 0 1 0 0 4 1 0 0 0 0 0 0 13 2 1370.7167 P57081 P57081 389 401 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 4 0.017925 45.873 By matching By MS/MS 1 1 28775000 9410100 19365000 4902 1780 5461 12284;12285 11258 11258 3354 1 RRSPSPAPPPR PSPPPTRRRRSPSPAP PSPAPPPRRRRTPTPP R R R P R R 1 3 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 11 2 1216.6789 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 567 577 SRRM1 Serine/arginine repetitive matrix protein 1 no no 3 0.0064749 73.758 By MS/MS By MS/MS 1 1 69070000 33775000 35296000 4903 442;1311 5462 12286;12287 11259;11260;11261 11260 853;854 3 RRSPSPYYSR EDYDYRYRRRSPSPYY SPSPYYSRYRSRSRSR R R R S R Y 0 3 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 2 0 0 0 10 2 1267.6422 Q13595;H7BXF3;P62995 Q13595 258 267 TRA2A;TRA2B Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta yes no 2 8.0066E-05 115.24 By MS/MS By MS/MS 1 2 62604000 28618000 33986000 4904 1927 5463 12288;12289;12290 11262;11263 11263 3718;3719;7693 2 RRSQSIEQESQEK DQSDKHDRRRSQSIEQ IEQESQEKQHKNKDET R R R E K Q 0 2 0 0 0 3 3 0 0 1 0 1 0 0 0 3 0 0 0 0 0 0 13 2 1603.7914 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 414 426 PRPF38B Pre-mRNA-splicing factor 38B yes no 3 0.0063158 67.902 By MS/MS By MS/MS 1 1 19402000 10604000 8797700 4905 192 5464 12291;12292 11264;11265 11265 345;346 2 RRTPTPPPR SPAPPPRRRRTPTPPP RTPTPPPRRRTPSPPP R R R P R R 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4 0 2 0 0 0 0 0 9 2 1076.6203 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 579 587 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2;3 0.0067493 73.632 By MS/MS By MS/MS 2 3 100570000 32114000 68456000 4906 442;1311 5465 12293;12294;12295;12296;12297 11266;11267;11268;11269 11266 6337;6338 4 RRTSADVEIR PSPARPPRRRTSADVE TSADVEIRGQGTGRPG R R R I R G 1 3 0 1 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 10 2 1201.6527 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2463 2472 SRCAP Helicase SRCAP yes no 3 0.0055621 73.881 By MS/MS By matching 1 1 18323000 10204000 8119500 4907 208 5466 12298;12299 11270 11270 380 1 RSASASHQADIK GRPPKSARRSASASHQ ASHQADIKEARREVEV R R S I K E 3 1 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 12 1 1269.6426 C9JXK0;Q14739 C9JXK0 96 107 LBR Lamin-B receptor yes no 2;3 0.00033862 113.43 By MS/MS By MS/MS 2 3 119810000 58329000 61479000 4908 615 5467 12300;12301;12302;12303;12304 11271;11272;11273;11274 11272 1122;1123 4 RSASASHQADIKEAR GRPPKSARRSASASHQ QADIKEARREVEVKLT R R S A R R 4 2 0 1 0 1 1 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 15 2 1625.8234 C9JXK0;Q14739 C9JXK0 96 110 LBR Lamin-B receptor yes no 4 0.0020307 62.617 By MS/MS By MS/MS 1 1 65792000 42822000 22970000 4909 615 5468 12305;12306 11275;11276 11275 1122;1123 2 RSASPDDDLGSSNWEAADLGNEER ESHPHGVKRSASPDDD ADLGNEERKQKFLRLM K R S E R K 3 2 2 4 0 0 3 2 0 0 2 0 0 0 1 4 0 1 0 0 0 0 24 1 2590.1168 O00193;E9PM92;E9PQA1 O00193 14 37 SMAP;C11orf58 Small acidic protein yes no 3 0.0049735 47.605 By matching By MS/MS 1 1 205740000 128480000 77256000 4910 1324 5469 12307;12308 11277 11277 2388;2389 1 RSDSASSEPVGIYQGFEK QVTQRASRRSDSASSE GIYQGFEKKTGVAGED R R S E K K 1 1 0 1 0 1 2 2 0 1 0 1 0 1 1 4 0 0 1 1 0 0 18 1 1955.9225 Q05655 Q05655 301 318 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2 0.0033857 56.424 By MS/MS By matching 1 1 11781000 5808600 5972200 4911 1855 5470 12309;12310 11278 11278 3492;3493;7667 1 RSDSLLSFR FPSEPGLRRSDSLLSF SDSLLSFRLDLDLGPS R R S F R L 0 2 0 1 0 0 0 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 9 1 1079.5724 Q00587 Q00587 189 197 CDC42EP1 Cdc42 effector protein 1 yes yes 2 0.0083927 104.94 By MS/MS By MS/MS 1 1 14475000 7597900 6877200 4912 1825 5471 12311;12312 11279;11280 11280 3417 2 RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR DVGAGALRRSDSPEIP GNSFVGLRVVAKWSSN R R S L R V 4 2 1 3 0 1 1 4 0 1 2 0 0 2 4 6 0 0 0 1 0 0 32 1 3201.5327 Q12888;A6NNK5 Q12888 1459 1490 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 4.5444E-11 80.415 By MS/MS By MS/MS 1 1 95527000 53436000 42091000 4913 1882 5472 12313;12314 11281;11282 11282 3582;3583 2 RSDSVSASER PEANRGLRRSDSVSAS DSVSASERAGPSRARH R R S E R A 1 2 0 1 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 1 0 0 10 1 1092.516 O43719 O43719 384 393 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.00045522 111.72 By MS/MS By MS/MS 1 1 83384000 56485000 26899000 4914 1392 5473 12315;12316 11283;11284 11284 2555 2 RSEACPCQPDSGSPLPAEEEK MKRSIEGRRSEACPCQ PLPAEEEKRLSAESGL R R S E K R 2 1 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 21 1 2343.0107 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5 A0A0G2JMS7 411 431 SCRIB Protein scribble homolog yes no 3 1.4785E-10 104.38 By MS/MS By MS/MS 1 1 21705000 11881000 9823700 4915 322 5474 12317;12318 11285;11286;11287;11288 11286 605 4 RSEEKEAGEI SNGKMASRRSEEKEAG EEKEAGEI________ R R S E I - 1 1 0 0 0 0 4 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 10 2 1146.5517 B8ZZ08;Q9NQ29 B8ZZ08 161 170 LUC7L Putative RNA-binding protein Luc7-like 1 yes no 2 0.0011403 113.95 By matching By MS/MS 1 1 14844000 6634100 8209700 4916 528 5475 12319;12320 11289 11289 967 1 RSESPPAELPSLR SLRKSTKKRSESPPAE PAELPSLRRSTRQKTT K R S L R R 1 2 0 0 0 0 2 0 0 0 2 0 0 0 3 3 0 0 0 0 0 0 13 1 1437.7576 Q14669;G5E9G6;H7C1L9 Q14669 309 321 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 3 0.012064 50.493 By MS/MS By matching 1 1 2008000 1115900 892060 4917 1949 5476 12321;12322 11290 11290 3762;3763 1 RSESSGILPNTTDMR LQTHPPCRRSESSGIL LPNTTDMRLRPGTRRD R R S M R L 0 2 1 1 0 0 1 1 0 1 1 0 1 0 1 3 2 0 0 0 0 0 15 1 1662.7995 Q92667;I3L2A2;I3L2N7;I3L0K6 Q92667 104 118 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 3 0.0036956 58.123 By MS/MS 1 2084700 0 2084700 4918 2431 5477 12323 11291 11291 4890;4891;4892 1 RSETPPHWR SRSRDRFRRSETPPHW SETPPHWRQEMQRAQR R R S W R Q 0 2 0 0 0 0 1 0 1 0 0 0 0 0 2 1 1 1 0 0 0 0 9 1 1164.5788 E9PG73;Q13427;C9JM79 E9PG73 340 348 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 3 0.029258 46.378 By matching By MS/MS 1 1 5102900 2139600 2963300 4919 789 5478 12324;12325 11292 11292 1 RSFSADNFIGIQR DLCRAAMRRSFSADNF DNFIGIQRSKAILS__ R R S Q R S 1 2 1 1 0 1 0 1 0 2 0 0 0 2 0 2 0 0 0 0 0 0 13 1 1509.7688 Q8N7R7 Q8N7R7 341 353 CCNYL1 Cyclin-Y-like protein 1 yes yes 3 0.00041628 92.952 By MS/MS By MS/MS 1 1 3969600 2497400 1472200 4920 2324 5479 12326;12327 11293;11294;11295 11294 4664;4665 3 RSFSKEVEER RARTPATKRSFSKEVE FSKEVEERSRERPSQP K R S E R S 0 2 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 10 2 1265.6364 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1021 1030 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 0.0012894 95.183 By MS/MS 1 18013000 18013000 0 4921 740 5480 12328 11296 11296 1336;1337 1 RSGSNGSVVSLEQQQKIEEQK IAAFQRKRRSGSNGSV QQKIEEQKKWLDQEME R R S Q K K 0 1 1 0 0 4 3 2 0 1 1 2 0 0 0 4 0 0 0 2 0 0 21 2 2330.1826 Q2M1P5 Q2M1P5 892 912 KIF7 Kinesin-like protein KIF7 yes yes 2 0.027625 41.644 By MS/MS 1 0 0 0 4922 2029 5481 12329 11297 11297 1 RSLSEQPVMDTATATEQAK TTSQGGVKRSLSEQPV ATATEQAKQLVKSGAI K R S A K Q 3 1 0 1 0 2 2 0 0 0 1 1 1 0 1 2 3 0 0 1 0 0 19 1 2062.0001 P18615;A0A0A0MT02;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 48 66 NELFE Negative elongation factor E yes no 3 0.0041341 52.731 By MS/MS By matching 1 1 6723000 4003400 2719600 4923 1601 5482 12330;12331 11298 11298 2947 1 RSLSMDSQVPVYSPSIDLK PLVKSLLRRSLSMDSQ YSPSIDLKSSQGSSSV R R S L K S 0 1 0 2 0 1 0 0 0 1 2 1 1 0 2 5 0 0 1 2 0 0 19 1 2121.0776 Q9ULJ3 Q9ULJ3 342 360 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 3 0.0017874 59.585 By MS/MS By MS/MS 1 1 5744500 3833400 1911100 4924 2847 5483 12332;12333 11299;11300 11299 5859;5860 2 RSLTNSHLEK FISDRESRRSLTNSHL LTNSHLEKKKCDEYIP R R S E K K 0 1 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 10 1 1183.6309 F8VX12;F8VX04;Q9H2H9 F8VX12 51 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 3 4.0056E-05 116.9 By MS/MS By MS/MS 1 1 24453000 10485000 13967000 4925 924 5484 12334;12335 11301;11302 11302 1658;1659;6474 2 RSMPNLAR RTNGDKLRRSMPNLAR RSMPNLARMPSTTAIS R R S A R M 1 2 1 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 0 0 0 0 8 1 943.50217 X6RGK9;B7Z326;A0A0C4DFN6;A0A0A0MSS3;Q8ND83;C9JUW9;X6RDJ2 X6RGK9 139 146 SLAIN1 SLAIN motif-containing protein 1 yes no 2 0.026994 69.998 By MS/MS 1 0 0 0 4926 224 5485 12336 11303 11303 1 RSNSAPLIHGLSDTSPVFQAEAPSAR SGGGGGLRRSNSAPLI QAEAPSARRNSTTFPS R R S A R R 4 2 1 1 0 1 1 1 1 1 2 0 0 1 3 5 1 0 0 1 0 0 26 1 2707.3678 Q96E09 Q96E09 34 59 FAM122A Protein FAM122A yes yes 3 0.00010493 62.781 By MS/MS 1 6885600 6885600 0 4927 2476 5486 12337 11304 11304 4991;4992;4993;6999 1 RSNSLLKYITDK EDVKLLARRSNSLLKY LLKYITDKSEEIAQIN R R S D K S 0 1 1 1 0 0 0 0 0 1 2 2 0 0 0 2 1 0 1 0 0 0 12 2 1436.7987 Q8N2Z9 Q8N2Z9 88 99 APITD1 Centromere protein S yes yes 2 0.023337 49.06 By MS/MS 1 1702900 1702900 0 4928 2300 5487 12338 11305 11305 7795 0 RSNSPDKFK GITRPSPRRSNSPDKF SNSPDKFKRPTPPPSP R R S F K R 0 1 1 1 0 0 0 0 0 0 0 2 0 1 1 2 0 0 0 0 0 0 9 2 1077.5567 Q16204 Q16204 416 424 CCDC6 Coiled-coil domain-containing protein 6 yes yes 3 0.021711 60.064 By MS/MS By matching 1 1 8374400 6381200 1993200 4929 2014 5488 12339;12340 11306 11306 1 RSPDAVASPGAPAPAPAPFR APDSAFARRSPDAVAS APAPAPFRDLASAAAT R R S F R D 6 2 0 1 0 0 0 1 0 0 0 0 0 1 6 2 0 0 0 1 0 0 20 1 1931.0013 A6NJT0 A6NJT0 442 461 UNCX Homeobox protein unc-4 homolog yes yes 3 0.0068305 47.397 By matching By MS/MS 1 1 7974000 3930400 4043600 4930 419 5489 12341;12342 11307 11307 788;789 1 RSPPADAIPK SPKRIAKRRSPPADAI PPADAIPKSKKVKDTR R R S P K S 2 1 0 1 0 0 0 0 0 1 0 1 0 0 3 1 0 0 0 0 0 0 10 1 1050.5822 M0R1Q8;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4;C9JW69;P18754 M0R1Q8 112 121 RCC1 Regulator of chromosome condensation yes no 2 0.023458 74.46 By MS/MS By matching 1 1 4740900 3874600 866280 4931 558 5490 12343;12344 11308 11308 1029 0 RSPQQTVPYVVPLSPK VTERQSTKRSPQQTVP YVVPLSPKLPKTKEYA K R S P K L 0 1 0 0 0 2 0 0 0 0 1 1 0 0 4 2 1 0 1 3 0 0 16 1 1794.9992 H0Y6S1;Q9UQR0 H0Y6S1 14 29 SCML2 Sex comb on midleg-like protein 2 yes no 2;3 0.00024396 78.902 By MS/MS By MS/MS 4 3 29221000 19087000 10134000 4932 1033 5491;5492 12345;12346;12347;12348;12349;12350;12351 11309;11310;11311;11312;11313;11314 11312 1923;1924;7438 6 RSPQQTVPYVVPLSPKLPK VTERQSTKRSPQQTVP PLSPKLPKTKEYASEG K R S P K T 0 1 0 0 0 2 0 0 0 0 2 2 0 0 5 2 1 0 1 3 0 0 19 2 2133.231 H0Y6S1;Q9UQR0 H0Y6S1 14 32 SCML2 Sex comb on midleg-like protein 2 yes no 3 0.017002 51.956 By MS/MS By MS/MS 1 1 2563100 0 2563100 4933 1033 5493 12352;12353 11315;11316 11316 1923;1924;7438 2 RSPRNYTDSTSPGGPR RPKARPSKRSPRNYTD STSPGGPRAPRGGAWR K R S P R A 0 3 1 1 0 0 0 2 0 0 0 0 0 0 3 3 2 0 1 0 0 0 16 2 1746.8398 A0A087X018 A0A087X018 473 488 SLC2A11 yes yes 2 0.028826 40.616 By MS/MS 1 0 0 0 4934 121 5494 12354 11317 11317 7175 1 RSPSPYYSR DYDYRYRRRSPSPYYS SPSPYYSRYRSRSRSR R R S S R Y 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 2 0 0 0 9 1 1111.5411 Q13595;H7BXF3;P62995;H7C2L4 Q13595 259 267 TRA2A;TRA2B Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta yes no 2 0.00099821 95.483 By MS/MS By MS/MS 1 1 19478000 9456800 10021000 4935 1927 5495 12355;12356 11318;11319 11319 3718;3719;7693 2 RSPVPAQIAITVPK DSQNLNSRRSPVPAQI QIAITVPKTWKKPKDR R R S P K T 2 1 0 0 0 1 0 0 0 2 0 1 0 0 3 1 1 0 0 2 0 0 14 1 1475.8824 A0A0A0MSA7;A0A0U1RQK7;O43432 A0A0A0MSA7 493 506 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 2 0.005049 80.17 By MS/MS By MS/MS 1 1 10998000 6109700 4888400 4936 213 5496 12357;12358 11320;11321 11320 390 2 RSPVSTRPLPSASQK PAPAAVGRRSPVSTRP PLPSASQKAGENQEHR R R S Q K A 1 2 0 0 0 1 0 0 0 0 1 1 0 0 3 4 1 0 0 1 0 0 15 2 1609.89 Q8ND56 Q8ND56 215 229 LSM14A Protein LSM14 homolog A yes yes 3 0.011804 56.774 By MS/MS 1 14517000 14517000 0 4937 2340 5497 12359 11322 11322 4689;4690 1 RSRPTSEGSDIESTEPQK NTSISKMKRSRPTSEG IESTEPQKQCSKKKKK K R S Q K Q 0 2 0 1 0 1 3 1 0 1 0 1 0 0 2 4 2 0 0 0 0 0 18 2 2002.9556 Q4G0J3;H0YA82;D6RFF0 Q4G0J3 253 270 LARP7 La-related protein 7 yes no 3 0.018391 50.752 By MS/MS By MS/MS 1 1 9044100 4641000 4403100 4938 2046 5498 12360;12361 11323;11324 11323 4004;4005;6858 2 RSRQNPQSPPQDSSVTSK DSTTTRQRRSRQNPQS QDSSVTSKRNIKKGAV R R S S K R 0 2 1 1 0 3 0 0 0 0 0 1 0 0 3 5 1 0 0 1 0 0 18 2 1997.9879 C9JEF4;C9J172;E9PEH1;E7EP63;E7ER52;A6NDI8;E7EPS2;Q9UBN7 C9JEF4 15 32 HDAC6 Histone deacetylase 6 yes no 3 0.0041066 74.783 By MS/MS 1 1781000 1781000 0 4939 409 5499 12362 11325 11325 777;6325 0 RSSDGSLSHEEDLAK NTPSTSGKRSSDGSLS SHEEDLAKVIELQEII K R S A K V 1 1 0 2 0 0 2 1 1 0 2 1 0 0 0 4 0 0 0 0 0 0 15 1 1629.7594 Q13136;H0YEF9;E9PJZ7 Q13136 237 251 PPFIA1 Liprin-alpha-1 yes no 3 0.018202 44.252 By MS/MS By matching 1 1 7423800 3972000 3451800 4940 1899 5500 12363;12364 11326 11326 3625 1 RSSDPALIGLSTSVSDSNFSSEEPSR ANMPLHVRRSSDPALI FSSEEPSRKNPTRWST R R S S R K 1 2 1 2 0 0 2 1 0 1 2 0 0 1 2 9 1 0 0 1 0 0 26 1 2724.2838 Q5VWV2;Q8TEW0;Q5VWU8 Q5VWV2 142 167 PARD3 Partitioning defective 3 homolog yes no 3 0.00011325 71.426 By MS/MS By matching 1 1 27716000 15687000 12029000 4941 2121 5501 12365;12366 11327 11327 4211 0 RSSDPWSNSHFPHEN IWSPTIGRRSSDPWSN NSHFPHEN________ R R S E N - 0 1 2 1 0 0 1 0 2 0 0 0 0 1 2 4 0 1 0 0 0 0 15 1 1795.7663 Q92545 Q92545 1869 1883 TMEM131 Transmembrane protein 131 yes yes 3 0.00066204 72.968 By MS/MS By MS/MS 1 1 10356000 5284700 5071300 4942 2423 5502 12367;12368 11328;11329 11328 4872;4873 2 RSSEKLVR SKLRASIRRSSEKLVR RSSEKLVRKLKGGSSR R R S V R K 0 2 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 8 2 973.56688 H0YG16;G3V5R9;G3V3H3 H0YG16 202 209 KLC1 yes no 3 0.0066716 72.289 By MS/MS 1 0 0 0 4943 1071 5503 12369 11330 11330 1981 1 RSSFSMEEGDVL EASKASSRRSSFSMEE SMEEGDVL________ R R S V L - 0 1 0 1 0 0 2 1 0 0 1 0 1 1 0 3 0 0 0 1 0 0 12 1 1355.6027 B1AKB5;B0QYS6;B0QYS7;P19484 B1AKB5 323 334 TFEB Transcription factor EB yes no 2 0.0071486 83.243 By MS/MS By matching 1 1 8801700 4823800 3977900 4944 449 5504 12370;12371 11331 11331 879 1 RSSGFISELPSEEGK FPSLRQEKRSSGFISE ELPSEEGKKLEHFTKL K R S G K K 0 1 0 0 0 0 3 2 0 1 1 1 0 1 1 4 0 0 0 0 0 0 15 1 1621.7948 Q5VZK9;A0A0U1RQQ1 Q5VZK9 966 980 LRRC16A Leucine-rich repeat-containing protein 16A yes no 2 0.00075006 97.073 By MS/MS By MS/MS 1 1 4876500 2200400 2676100 4945 2124 5505 12372;12373 11332;11333 11332 4220;4221 2 RSSGPAPQSLLSAWR TVHSTPVRRSSGPAPQ QSLLSAWRVSALPTPA R R S W R V 2 2 0 0 0 1 0 1 0 0 2 0 0 0 2 4 0 1 0 0 0 0 15 1 1611.8481 Q9NYZ3 Q9NYZ3 493 507 GTSE1 G2 and S phase-expressed protein 1 yes yes 3 3.8003E-10 125.96 By MS/MS By MS/MS 1 1 6763400 3652700 3110700 4946 2762 5506 12374;12375 11334;11335 11335 5675;5676 2 RSSITEPEGPNGPNIQK NAPRPLKKRSSITEPE PNGPNIQKLLYQRTTI K R S Q K L 0 1 2 0 0 1 2 2 0 2 0 1 0 0 3 2 1 0 0 0 0 0 17 1 1822.9173 Q13625 Q13625 735 751 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 3 0.0042261 54.768 By MS/MS By matching 1 1 4000600 1928500 2072100 4947 1931 5507 12376;12377 11336 11336 3726;6806 1 RSSLLSLMTGK ESKKPESRRSSLLSLM LLSLMTGKKDVAKGSE R R S G K K 0 1 0 0 0 0 0 1 0 0 3 1 1 0 0 3 1 0 0 0 0 0 11 1 1191.6645 Q6WKZ4;E7EX40 Q6WKZ4 433 443 RAB11FIP1 Rab11 family-interacting protein 1 no no 2 1.745E-05 135.91 By MS/MS By MS/MS 1 1 9278000 5268900 4009100 4948 2175;752 5508 12378;12379 11337;11338 11338 1374 2 RSSLLSLMTGKK ESKKPESRRSSLLSLM LSLMTGKKDVAKGSEG R R S K K D 0 1 0 0 0 0 0 1 0 0 3 2 1 0 0 3 1 0 0 0 0 0 12 2 1319.7595 Q6WKZ4;E7EX40 Q6WKZ4 433 444 RAB11FIP1 Rab11 family-interacting protein 1 no no 3 0.018686 57.788 By MS/MS 1 1646700 0 1646700 4949 2175;752 5509 12380 11339 11339 1374 1 RSSLLSR SPLFIFMRRSSLLSRS RRSSLLSRSSSGYFSF R R S S R S 0 2 0 0 0 0 0 0 0 0 2 0 0 0 0 3 0 0 0 0 0 0 7 1 817.477 C9J417;O43521 C9J417 85 91 BCL2L11 Bcl-2-like protein 11 yes no 2 0.015998 103.26 By MS/MS By MS/MS 1 1 4231000 1836700 2394300 4950 559 5510 12381;12382 11340;11341 11341 1030 2 RSSLPVSNER VKSGVVTKRSSLPVSN SLPVSNERHLEVKVNV K R S E R H 0 2 1 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 1 1143.5996 H3BLS7;Q5THJ4 H3BLS7 1276 1285 VPS13D Vacuolar protein sorting-associated protein 13D yes no 2 0.013833 48.423 By MS/MS 1 21640000 0 21640000 4951 1107 5511 12383 11342 11342 2032;2033 1 RSSNVSYKYSK SKLTTCCRRSSNVSYK NVSYKYSKVNKEEETD R R S S K V 0 1 1 0 0 0 0 0 0 0 0 2 0 0 0 4 0 0 2 1 0 0 11 2 1317.6677 P11717 P11717 2345 2355 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.024305 46.3 By MS/MS 1 0 0 0 4952 1567 5512 12384 11343 11343 1 RSSPAAFINPPIGTVTPALK AREKISLKRSSPAAFI GTVTPALKLTKTIQRM K R S L K L 3 1 1 0 0 0 0 1 0 2 1 1 0 1 4 2 2 0 0 1 0 0 20 1 2036.1419 F6VRR5;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 125 144 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 yes no 3 0.00047492 69.081 By MS/MS By matching 1 1 11555000 6231300 5323400 4953 908 5513 12385;12386 11344;11345 11345 1627;1628 2 RSSPESDRQVHSR DSRSHSSRRSSPESDR SDRQVHSRSGSFDSRD R R S S R S 0 3 0 1 0 1 1 0 1 0 0 0 0 0 1 4 0 0 0 1 0 0 13 2 1539.7502 Q5T200 Q5T200 1277 1289 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3;4 0.0013654 72.428 By matching By MS/MS 2 2 23743000 4875000 18868000 4954 2094 5514 12387;12388;12389;12390 11346;11347 11346 4134 2 RSSPSARPPDVPGQQPQAAK KAEYPRRRRSSPSARP GQQPQAAKSPSPVQGK R R S A K S 3 2 0 1 0 3 0 1 0 0 0 1 0 0 5 3 0 0 0 1 0 0 20 2 2073.0715 A0A0A6YYC7;Q96JP5 A0A0A6YYC7 81 100 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 yes no 3 0.020959 47.082 By MS/MS By matching 1 1 17373000 9554300 7818600 4955 253 5515 12391;12392 11348 11348 459;460 1 RSSQPSPTAVPASDSPPTKQEVK PRDARPPRRSSQPSPT PPTKQEVKKAGERHKL R R S V K K 2 1 0 1 0 2 1 0 0 0 0 2 0 0 5 5 2 0 0 2 0 0 23 2 2393.2187 Q3KQU3;C9JIR3;E9PLH3 Q3KQU3 111 133 MAP7D1 MAP7 domain-containing protein 1 yes no 3 0.0096229 55.662 By MS/MS By MS/MS 2 2 24463000 14160000 10303000 4956 2036 5516;5517 12393;12394;12395;12396 11349;11350;11351 11351 3986;3987;3988;3989;3990;6855 2 RSSTSSEPTPTVK RQGMGLSRRSSTSSEP SEPTPTVKTLIKSFDS R R S V K T 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 4 3 0 0 1 0 0 13 1 1375.6943 Q69YQ0;F8WAN1 Q69YQ0 830 842 SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 2 4.7388E-10 137.93 By MS/MS By MS/MS 1 1 13987000 7457100 6530200 4957 2137 5518 12397;12398 11352;11353 11353 4251 2 RSSTVAPAQPDGAESEWTDVETR SPNGSRKRRSSTVAPA EWTDVETRCSVAVEMR R R S T R C 3 2 0 2 0 1 3 1 0 0 0 0 0 0 2 3 3 1 0 2 0 0 23 1 2488.1466 Q02241;H7BYN4 Q02241 910 932 KIF23 Kinesin-like protein KIF23;Kinesin-like protein yes no 3 6.0762E-05 72.859 By MS/MS By MS/MS 1 1 30330000 16432000 13899000 4958 1838 5519 12399;12400 11354;11355 11354 3441 2 RSTQESLTAGGTDLK APATRVTRRSTQESLT TAGGTDLKRELHPPAT R R S L K R 1 1 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 15 1 1562.79 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 303 317 LRRC41 Leucine-rich repeat-containing protein 41 yes no 2 0.025154 45.908 By MS/MS 1 0 0 0 4959 33 5520 12401 11356 11356 62;6223 1 RSTQESLTAGGTDLKR APATRVTRRSTQESLT AGGTDLKRELHPPATS R R S K R E 1 2 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 16 2 1718.8911 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 303 318 LRRC41 Leucine-rich repeat-containing protein 41 yes no 3 5.2374E-55 182.7 By MS/MS By MS/MS 1 1 27668000 15046000 12622000 4960 33 5521 12402;12403 11357;11358 11357 62;6223 2 RSTSPIIGSPPVR LSERALPRRSTSPIIG IIGSPPVRAVPIGTPP R R S V R A 0 2 0 0 0 0 0 1 0 2 0 0 0 0 3 3 1 0 0 1 0 0 13 1 1365.7728 Q86TB9 Q86TB9 176 188 PATL1 Protein PAT1 homolog 1 yes yes 2;3 0.0042899 97.823 By MS/MS By MS/MS 3 3 134190000 74562000 59633000 4961 2229 5522;5523 12404;12405;12406;12407;12408;12409 11359;11360;11361;11362;11363 11361 4467;4468;4469;6938 5 RSTSTLYSQFQTAESENR SGSRQAARRSTSTLYS QTAESENRSYEGTLYK R R S N R S 1 2 1 0 0 2 2 0 0 0 1 0 0 1 0 4 3 0 1 0 0 0 18 1 2103.9821 G5E933;O95248;H0Y5W8 G5E933 1746 1763 SBF1 Myotubularin-related protein 5 yes no 3 0.0055994 78.413 By matching By MS/MS 2 2 8255100 4135400 4119700 4962 988 5524;5525 12410;12411;12412;12413 11364;11365 11365 1802;1803;6494;6495;7426 2 RSTVQSSGR TTMGALKRRSTVQSSG STVQSSGRAQGGRAPA R R S G R A 0 2 0 0 0 1 0 1 0 0 0 0 0 0 0 3 1 0 0 1 0 0 9 1 976.50501 H3BUE3 H3BUE3 139 147 ATXN2L yes yes 2 0.0031107 91.701 By MS/MS 1 0 0 0 4963 1144 5526 12414 11366 11366 2087 1 RSYSPMRK RERARRRRRSYSPMRK RSYSPMRKRRRDSPSH R R S R K R 0 2 0 0 0 0 0 0 0 0 0 1 1 0 1 2 0 0 1 0 0 0 8 2 1023.5284 A7MD48 A7MD48 488 495 SRRM4 Serine/arginine repetitive matrix protein 4 yes yes 2 0.0053448 70.399 By MS/MS 1 0 0 0 4964 429 5527 12415 11367 11367 47 809;810 1 RTAFYNEDDSEEEQR MRTRNQGRRTAFYNED DDSEEEQRQLLFEDTS R R T Q R Q 1 2 1 2 0 1 4 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 15 1 1887.7871 Q8WWQ0 Q8WWQ0 1774 1788 PHIP PH-interacting protein yes yes 3 0.0055989 55.337 By MS/MS By MS/MS 1 1 5950500 3469100 2481400 4965 2410 5528 12416;12417 11368;11369 11368 4836 2 RTAPAKQAPSAQ YGVAQTPRRTAPAKQA AKQAPSAQ________ R R T A Q - 4 1 0 0 0 2 0 0 0 0 0 1 0 0 2 1 1 0 0 0 0 0 12 2 1224.6575 Q9BXI3 Q9BXI3 357 368 NT5C1A Cytosolic 5-nucleotidase 1A yes yes 3 0.0040341 76.927 By MS/MS By matching 1 1 11600000 6893900 4705900 4966 2598 5529 12418;12419 11370 11370 5265 0 RTASPPPPPKR SPSPPPKRRTASPPPP SPPPPPKRRASPSPPP R R T K R R 1 2 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 11 2 1202.6884 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 622 632 SRRM1 Serine/arginine repetitive matrix protein 1 no no 3 0.029888 54.094 By MS/MS 1 3975600 0 3975600 4967 442;1311 5530 12420 11371 11371 855;6339 1 RTDALTSSPGR SSPGRSSRRTDALTSS ALTSSPGRDLPPFEDE R R T G R D 1 2 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 11 1 1159.5945 P49736;C9J013;C9JZ21;F8WDM3 P49736 34 44 MCM2 DNA replication licensing factor MCM2 yes no 2 0.023179 69.229 By matching By MS/MS 1 1 16920000 8557000 8362900 4968 1726 5531 12421;12422 11372 11372 1 RTESVPSDINNPVDR FLPLTRLRRTESVPSD DINNPVDRAAEPHFGT R R T D R A 0 2 2 2 0 0 1 0 0 1 0 0 0 0 2 2 1 0 0 2 0 0 15 1 1697.8333 A8MY87;A0A0A0MQW1;Q8IVT5 A8MY87 138 152 KSR1 Kinase suppressor of Ras 1 yes no 2 0.0020835 95.347 By MS/MS By matching 1 1 13108000 6828900 6279200 4969 165 5532 12423;12424 11373 11373 295;6264 1 RTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIK TEEKKSLKRTFQQIQE LLTEELIKALQDLENA K R T I K A 1 1 0 4 0 4 5 2 0 2 3 1 0 1 4 3 2 0 2 0 0 0 35 1 3994.8596 Q9NQG5;A2A2M0 Q9NQG5 148 182 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 4 0.0021818 47.105 By MS/MS By matching 1 1 14213000 11722000 2491000 4970 2708 5533 12425;12426 11374 11374 5523;5524 1 RTFSLTEVR NPPPKLRRRTFSLTEV TFSLTEVRGQVSESED R R T V R G 0 2 0 0 0 0 1 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 9 1 1107.6037 O95239 O95239 798 806 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.0037493 122.18 By MS/MS By matching 1 1 14317000 7425600 6891300 4971 1480 5534 12427;12428 11375 11375 2738 1 RTHSDASDDEAFTTSK SKAKSYYRRTHSDASD DEAFTTSKTKRKGRHR R R T S K T 2 1 0 3 0 0 1 0 1 0 0 1 0 1 0 3 3 0 0 0 0 0 16 1 1766.7707 Q13017;H0YK04 Q13017 1170 1185 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 0.009452 48.146 By MS/MS By matching 1 1 8866600 4457100 4409400 4972 1891 5535 12429;12430 11376 11376 3611;3612 1 RTIQEVLEEQSEDEDREAK TARKQLPKRTIQEVLE EDEDREAKRKKEEEEE K R T A K R 1 2 0 2 0 2 6 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 19 2 2303.0877 M0R0Q7;P18858 M0R0Q7 131 149 LIG1 DNA ligase;DNA ligase 1 yes no 3 0.015439 49.306 By matching By MS/MS 1 1 32958000 17348000 15610000 4973 1316 5536 12431;12432 11377 11377 2370 1 RTNSTGGSSGSSVGGGSGK RSPRLGHRRTNSTGGS SVGGGSGKTLSMENIQ R R T G K T 0 1 1 0 0 0 0 7 0 0 0 1 0 0 0 6 2 0 0 1 0 0 19 1 1638.7558 X6RM00;G8JLD3;X6RLX0;Q8IUD2;K7EKH8;A0A0U1RRM0;K7EIZ7;A0A0U1RQD6 X6RM00 34 52 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes no 2 8.8378E-06 90.759 By matching By MS/MS 1 1 10710000 4895000 5814900 4974 1002 5537 12433;12434 11378 11378 1829 1 RTPSDDEEDNLFAPPK TLKEKKERRTPSDDEE DNLFAPPKLTDEDFSP R R T P K L 1 1 1 3 0 0 2 0 0 0 1 1 0 1 3 1 1 0 0 0 0 0 16 1 1829.8432 A0A0A0MR88;A0A096LPC5;J3KP36;Q9Y4E1;F8W7U3;E7ESD2;Q641Q2 F8W7U3 242 257 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A no no 2;3 0.00040046 98.552 By MS/MS By MS/MS 3 2 17885000 9851000 8033700 4975 729;158 5538 12435;12436;12437;12438;12439 11379;11380;11381;11382;11383;11384 11381 283 6 RTPSEADRWLEEVSK GLFQAGHRRTPSEADR RWLEEVSKSVRAQQPQ R R T S K S 1 2 0 1 0 0 3 0 0 0 1 1 0 0 1 2 1 1 0 1 0 0 15 2 1801.8959 G3V3Z8;P49757 G3V3Z8 291 305 NUMB Protein numb homolog yes no 3 0.016484 54.094 By MS/MS By matching 1 1 36132000 17662000 18470000 4976 972 5539 12440;12441 11385 11385 1772 1 RTQSLSALPKER LPLPPGKRRTQSLSAL LSALPKERDSSSEKDG R R T E R D 1 2 0 0 0 1 1 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 12 2 1384.7787 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 1079 1090 CIC Protein capicua homolog yes no 3 0.0090448 65.563 By MS/MS By matching 1 1 3038700 1991500 1047200 4977 1207 5540 12442;12443 11386 11386 2190 1 RTSADVEIR SPARPPRRRTSADVEI TSADVEIRGQGTGRPG R R T I R G 1 2 0 1 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 9 1 1045.5516 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2464 2472 SRCAP Helicase SRCAP yes no 2 0.0018472 104.41 By MS/MS By MS/MS 1 1 0 0 0 4978 208 5541 12444;12445 11387;11388 11387 380 2 RTSFSTSDVSK ALTPTEERRTSFSTSD FSTSDVSKLLPSLAKA R R T S K L 0 1 0 1 0 0 0 0 0 0 0 1 0 1 0 4 2 0 0 1 0 0 11 1 1213.5939 M0R300;M0R0P8;Q13459 M0R300 1352 1362 MYO9B Unconventional myosin-IXb yes no 2 2.2322E-05 120.59 By MS/MS By MS/MS 1 1 18841000 8980400 9860900 4979 1315 5542 12446;12447 11389;11390 11389 2365 2 RTSIEVSVK AQGRKRKKRTSIEVSV TSIEVSVKGALESHFL K R T V K G 0 1 0 0 0 0 1 0 0 1 0 1 0 0 0 2 1 0 0 2 0 0 9 1 1017.5819 P20265;P49335;P20264 P20265 358 366 POU3F2;POU3F4;POU3F3 POU domain, class 3, transcription factor 2;POU domain, class 3, transcription factor 4;POU domain, class 3, transcription factor 3 yes no 2 0.0045972 82.489 By MS/MS 1 0 0 0 4980 1608 5543 12448 11391 11391 2968 1 RTSLSAEDAEVTK DLLFMSHKRTSLSAED AEDAEVTKAFEEDIET K R T T K A 2 1 0 1 0 0 2 0 0 0 1 1 0 0 0 2 2 0 0 1 0 0 13 1 1405.7049 Q9P2D1 Q9P2D1 2531 2543 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 2 0.0041522 97.2 By MS/MS By MS/MS 1 1 4355300 0 4355300 4981 2788 5544 12449;12450 11392;11393 11392 5725 1 RTSMGGTQQQFVEGVR RAHQDTQRRTSMGGTQ QQFVEGVRMEEIVEGC R R T V R M 0 2 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 16 1 1779.8686 B4DGU4;P35222 B4DGU4 543 558 CTNNB1 Catenin beta-1 yes no 2;3 1.8196E-29 161.14 By MS/MS By MS/MS 3 3 96598000 49050000 47548000 4982 481 5545;5546 12451;12452;12453;12454;12455;12456 11394;11395;11396;11397;11398;11399 11398 53 910;6348;6349 6 RTSPQVLGSILK PKAYELEKRTSPQVLG QVLGSILKSGTTSESG K R T L K S 0 1 0 0 0 1 0 1 0 1 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1297.7718 Q7Z417 Q7Z417 570 581 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 1.9189E-08 137.01 By MS/MS By MS/MS 1 1 22910000 12244000 10666000 4983 2214 5547 12457;12458 11400;11401 11400 4412 2 RTSPSSLPGR QQLFRSPRRTSPSSLP SPSSLPGRLSRALSLG R R T G R L 0 2 0 0 0 0 0 1 0 0 1 0 0 0 2 3 1 0 0 0 0 0 10 1 1056.5676 H0Y4R5;Q5SNT2 H0Y4R5 349 358 TMEM201 Transmembrane protein 201 yes no 2 0.019297 72.731 By matching By MS/MS 1 1 11566000 6496000 5069600 4984 1019 5548 12459;12460 11402 11402 1887 1 RTSTPVIMEGVQEETDTR KLEREHKRRTSTPVIM VQEETDTRDVKRQVER R R T T R D 0 2 0 1 0 1 3 1 0 1 0 0 1 0 1 1 4 0 0 2 0 0 18 1 2047.9844 Q8NFC6 Q8NFC6 657 674 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 4.2327E-06 91.202 By MS/MS 1 5093400 5093400 0 4985 2353 5549 12461 11403 11403 4718;6965 1 RTVTEIDEKEYISLR YPHVEDYRRTVTEIDE EKEYISLRLIISELRN R R T L R L 0 2 0 1 0 0 3 0 0 2 1 1 0 0 0 1 2 0 1 1 0 0 15 2 1850.9738 A0A087WTV2;B3KQ25;K7ESG5;K9J957;P61289 A0A087WTV2 120 134 PSME3 Proteasome activator complex subunit 3 yes no 2 0.030253 43.261 By MS/MS 1 0 0 0 4986 35 5550 12462 11404 11404 7156 1 RVALSDDETKETENMR QKEKKRGKRVALSDDE TKETENMRKKRRRIKL K R V M R K 1 2 1 2 0 0 3 0 0 0 1 1 1 0 0 1 2 0 0 1 0 0 16 2 1892.8898 Q15054;H0YD46 Q15054 303 318 POLD3 DNA polymerase delta subunit 3 yes no 3 0.014686 53.625 By MS/MS By matching 2 2 116480000 62878000 53599000 4987 1972 5551;5552 12463;12464;12465;12466 11405;11406 11406 264 3843 2 RVGTEGLVDSFSQGLER ________________ SFSQGLERSYAVSSSV R R V E R S 0 2 0 1 0 1 2 3 0 0 2 0 0 1 0 2 1 0 0 2 0 0 17 1 1848.933 T1ECW5;O75170 T1ECW5 6 22 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 3 0.0016237 62.663 By MS/MS By MS/MS 1 1 4416100 2245000 2171100 4988 3013 5553 12467;12468 11407;11408 11407 6208;6209 2 RVHNNSPDTSR SSDISSPRRVHNNSPD NNSPDTSRRTLGSSDT R R V S R R 0 2 2 1 0 0 0 0 1 0 0 0 0 0 1 2 1 0 0 1 0 0 11 1 1281.6174 Q9BRD0 Q9BRD0 243 253 BUD13 BUD13 homolog yes yes 3 0.0075848 58.626 By MS/MS By matching 1 1 3525800 1557900 1967900 4989 2571 5554 12469;12470 11409 11409 5198 1 RVHNNSPDTSRR SSDISSPRRVHNNSPD NSPDTSRRTLGSSDTQ R R V R R T 0 3 2 1 0 0 0 0 1 0 0 0 0 0 1 2 1 0 0 1 0 0 12 2 1437.7185 Q9BRD0 Q9BRD0 243 254 BUD13 BUD13 homolog yes yes 4 0.017554 46.797 By matching By MS/MS 1 1 2327600 681370 1646200 4990 2571 5555 12471;12472 11410 11410 5198 1 RVNDAEPGSPEAPQGK RRRPRRRRRVNDAEPG SPEAPQGKRRKADGED R R V G K R 2 1 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 16 1 1650.7962 Q8N8A6 Q8N8A6 75 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 3 5.2338E-05 93.062 By MS/MS By MS/MS 1 1 22278000 12591000 9687900 4991 2325 5556 12473;12474 11411;11412 11412 4666 2 RVNNGNTAPEDSSPAKK ARALNESKRVNNGNTA EDSSPAKKTRRCQRQE K R V K K T 2 1 3 1 0 0 1 1 0 0 0 2 0 0 2 2 1 0 0 1 0 0 17 2 1783.8813 E9PJ27;G3V167;Q9UGN5 E9PJ27 22 38 PARP2 Poly [ADP-ribose] polymerase 2 yes no 3 2.1221E-05 95.073 By MS/MS By MS/MS 2 2 21614000 11994000 9619300 4992 806 5557;5558 12475;12476;12477;12478 11413;11414;11415 11413 7;8 1447;1448 3 RVNSGDTEVGSSLLR RVKAIPRRRVNSGDTE EVGSSLLRHPSPELSR R R V L R H 0 2 1 1 0 0 1 2 0 0 2 0 0 0 0 3 1 0 0 2 0 0 15 1 1588.8169 O75592 O75592 3464 3478 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2;3 0.00036004 80.859 By matching By MS/MS 1 2 15790000 6758900 9031200 4993 1444 5559 12479;12480;12481 11416;11417 11417 2670 2 RVPLGPSSPLSVSQPMLGIR PHLHQMPRRVPLGPSS SQPMLGIREARPAGLG R R V I R E 0 2 0 0 0 1 0 2 0 1 3 0 1 0 4 4 0 0 0 2 0 0 20 1 2090.167 F5GWJ5;Q96MS0 F5GWJ5 1157 1176 ROBO3 Roundabout homolog 3 yes no 3 0.00050942 68.525 By MS/MS By matching 1 1 3194200 2118600 1075600 4994 858 5560 12482;12483 11418 11418 1544 1 RVPLSPLSLLAGPADAR PGASPHHRRVPLSPLS LAGPADARRSQQQLPK R R V A R R 3 2 0 1 0 0 0 1 0 0 4 0 0 0 3 2 0 0 0 1 0 0 17 1 1731.9996 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 429 445 CRTC2 CREB-regulated transcription coactivator 2 yes no 3 6.3125E-06 100.9 By MS/MS By MS/MS 1 1 13811000 10633000 3177900 4995 2054 5561 12484;12485 11419;11420 11419 4040 2 RVPSINQK TKKIFLFKRVPSINQK RVPSINQKIVKNNNEP K R V Q K I 0 1 1 0 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 1 0 0 8 1 940.54541 Q92834 Q92834 958 965 RPGR X-linked retinitis pigmentosa GTPase regulator yes yes 2 0.016652 95.775 By matching By MS/MS 1 1 13176000 6384700 6791500 4996 2440 5562 12486;12487 11421 11421 4914 1 RVPSPTPAPKEAVR VQPEVALKRVPSPTPA PAPKEAVREGRPPEPT K R V V R E 2 2 0 0 0 0 1 0 0 0 0 1 0 0 4 1 1 0 0 2 0 0 14 2 1503.8522 Q9UQ35 Q9UQ35 2578 2591 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.002227 75.682 By MS/MS By matching 1 1 8766000 6902600 1863400 4997 2877 5563 12488;12489 11422 11422 5966 1 RVQSLPSVPLSCAAYR LPEQVELRRVQSLPSV PLSCAAYREALPGWMR R R V Y R E 2 2 0 0 1 1 0 0 0 0 2 0 0 0 2 3 0 0 1 2 0 0 16 1 1802.9461 Q96AD5 Q96AD5 401 416 PNPLA2 Patatin-like phospholipase domain-containing protein 2 yes yes 3 0.0006728 70.114 By MS/MS By MS/MS 1 1 11554000 7040600 4513000 4998 2456 5564 12490;12491 11423;11424;11425 11424 4945 3 RVSADSQPFQHGDKVK GKPAELQRRVSADSQP FQHGDKVKCLLDTDVL R R V V K C 1 1 0 2 0 2 0 1 1 0 0 2 0 1 1 2 0 0 0 2 0 0 16 2 1797.9122 D6RED3;D6RAZ0;H0YAM8;F2Z2L2;E9PD12;Q96AX9 D6RED3 249 264 MIB2 E3 ubiquitin-protein ligase MIB2 yes no 4 0.0046611 54.859 By MS/MS 1 2876000 0 2876000 4999 655 5565 12492 11426 11426 1184 1 RVSEVEEEKEPVPQPLPSDDTR RLRGRGRRRVSEVEEE PLPSDDTRVENMDISD R R V T R V 0 2 0 2 0 1 5 0 0 0 1 1 0 0 4 2 1 0 0 3 0 0 22 2 2535.2453 O43290 O43290 446 467 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 3 1.4359E-05 79.663 By MS/MS By MS/MS 1 1 44194000 30121000 14073000 5000 1375 5566 12493;12494 11427;11428 11427 2518 2 RVSFADTIK LRNKKNSRRVSFADTI VSFADTIKVFQTESHM R R V I K V 1 1 0 1 0 0 0 0 0 1 0 1 0 1 0 1 1 0 0 1 0 0 9 1 1035.5713 E9PPJ1;Q8NG31 E9PPJ1 58 66 CASC5 Protein CASC5 yes no 2 0.0067377 110.84 By matching By MS/MS 1 1 14446000 8742900 5702900 5001 835 5567 12495;12496 11429 11429 1512 1 RVSGPDPKPGSNCSPAQSVLSEVPSVPTNGMAK SSPLSKKRRVSGPDPK VPTNGMAKNGSEADID R R V A K N 2 1 2 1 1 1 1 3 0 0 1 2 1 0 6 6 1 0 0 4 0 0 33 2 3349.6395 P22314;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3;Q5JRS2 P22314 11 43 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 3;4 0.0023206 47.537 By MS/MS By MS/MS 4 3 153140000 86084000 67057000 5002 1617 5568;5569;5570 12497;12498;12499;12500;12501;12502;12503 11430;11431;11432;11433 11432 200 2990;2991;2992;2993 4 RVSHSPPPK SPSPPPKRRVSHSPPP VSHSPPPKQRSSPVTK R R V P K Q 0 1 0 0 0 0 0 0 1 0 0 1 0 0 3 2 0 0 0 1 0 0 9 1 1003.5563 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 643 651 SRRM1 Serine/arginine repetitive matrix protein 1 no no 3 0.023219 42.425 By MS/MS By matching 1 1 52424000 26782000 25642000 5003 442;1311 5571 12504;12505 11434 11434 856 1 RVSISEGDDKIEYR GESVYGEKRVSISEGD GDDKIEYRAWNPFRSK K R V Y R A 0 2 0 2 0 0 2 1 0 2 0 1 0 0 0 2 0 0 1 1 0 0 14 2 1665.8322 M0R2U2;M0R1H0;M0R2B0;M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087 M0R2U2 109 122 FBL rRNA 2-O-methyltransferase fibrillarin yes no 3 0.001057 84.895 By MS/MS By MS/MS 1 1 16566000 9647400 6918900 5004 1297 5572 12506;12507 11435;11436 11435 2337 2 RVSLEPHQGPGTPESK ITTRQQRKRVSLEPHQ GPGTPESKKATSCFPR K R V S K K 0 1 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 16 1 1717.8747 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1973 1988 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 4.7919E-05 105.92 By MS/MS By MS/MS 1 1 14688000 7007400 7681000 5005 95 5573 12508;12509 11437;11438 11437 6240 2 RVSLSEIGFGK KPLSRRLRRVSLSEIG LSEIGFGKLETYIKLD R R V G K L 0 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 1 0 0 11 1 1191.6612 H0YBX5;E5RJM2;E5RGN0;A0A087WZU2;Q00536 H0YBX5 111 121 CDK16 Cyclin-dependent kinase 16 yes no 2 0.0002012 116.51 By MS/MS By MS/MS 1 1 20967000 11709000 9257600 5006 117 5574 12510;12511 11439;11440 11439 210;211 2 RVSLVGADDLRK PQAEGPPKRVSLVGAD VGADDLRKMQEEEARK K R V R K M 1 2 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 12 2 1327.7572 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1295 1306 SCRIB Protein scribble homolog yes no 3 7.909E-07 121.45 By MS/MS By MS/MS 1 1 6943500 3986400 2957200 5007 322 5575 12512;12513 11441;11442 11441 606 2 RVSPLNLSSVTP SANNTPTRRVSPLNLS LNLSSVTP________ R R V T P - 0 1 1 0 0 0 0 0 0 0 2 0 0 0 2 3 1 0 0 2 0 0 12 1 1268.7089 Q9UJX2 Q9UJX2 586 597 CDC23 Cell division cycle protein 23 homolog yes yes 2 0.0042257 95.273 By MS/MS By MS/MS 3 3 41689000 21956000 19732000 5008 2821 5576;5577 12514;12515;12516;12517;12518;12519 11443;11444;11445;11446 11445 5800;7088 3 RVSRTPEPK SPSTRPIRRVSRTPEP VSRTPEPKKIKKAASP R R V P K K 0 2 0 0 0 0 1 0 0 0 0 1 0 0 2 1 1 0 0 1 0 0 9 2 1068.604 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 732 740 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.020749 77.387 By MS/MS By matching 1 1 330450000 174050000 156400000 5009 442 5578 12520;12521 11447 11447 857 1 RVSVCAETYNPDEEEEDTDPR PVPSRFNRRVSVCAET EEEDTDPRVIHPKTDE R R V P R V 1 2 1 3 1 0 5 0 0 0 0 0 0 0 2 1 2 0 1 2 0 0 21 1 2510.0503 P13861 P13861 97 117 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 3 3.6922E-12 111.49 By MS/MS By MS/MS 1 1 207960000 120270000 87690000 5010 1577 5579 12522;12523 11448;11449 11449 2899 2 RVSVCAETYNPDEEEEDTDPRVIHPK PVPSRFNRRVSVCAET DPRVIHPKTDEQRCRL R R V P K T 1 2 1 3 1 0 5 0 1 1 0 1 0 0 3 1 2 0 1 3 0 0 26 2 3084.4095 P13861 P13861 97 122 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 4 0.00022566 58.373 By matching By MS/MS 1 1 42162000 24722000 17440000 5011 1577 5580 12524;12525 11450 11450 2899 1 RVTQEQGVSLLEDK SALREPSRRVTQEQGV GVSLLEDKKESREDET R R V D K K 0 1 0 1 0 2 2 1 0 0 2 1 0 0 0 1 1 0 0 2 0 0 14 1 1600.842 M0R300;M0R0P8;Q13459 M0R300 1181 1194 MYO9B Unconventional myosin-IXb yes no 4 0.0069624 56.414 By MS/MS By matching 1 1 26485000 10618000 15867000 5012 1315 5581 12526;12527 11451 11451 2366 1 RVTQHESDNENEIQIQNK DDSLEVERRVTQHESD NEIQIQNKLKKDFPKQ R R V N K L 0 1 3 1 0 3 3 0 1 2 0 1 0 0 0 1 1 0 0 1 0 0 18 1 2181.041 Q5VZL5 Q5VZL5 116 133 ZMYM4 Zinc finger MYM-type protein 4 yes yes 3 3.5122E-20 135.49 By MS/MS By MS/MS 1 1 23780000 11464000 12316000 5013 2125 5582 12528;12529 11452;11453 11453 4228 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDR SRAIPATRRVVLGDGV GTRIIYDRKFLMECRN R R V D R K 0 3 0 3 0 1 0 7 0 2 3 0 0 1 4 2 6 0 2 3 0 0 37 2 3862.9854 Q13541 Q13541 20 56 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 4 0.00018126 50.583 By MS/MS By matching 1 1 7456900 5106600 2350300 5014 1922 5583 12530;12531 11454 11454 6801;6802;7690 1 RWDQTADQTPGATPK QPPSKRKRRWDQTADQ QTPGATPKKLSSWDQA R R W P K K 2 1 0 2 0 2 0 1 0 0 0 1 0 0 2 0 3 1 0 0 0 0 15 1 1670.8012 O75533 O75533 199 213 SF3B1 Splicing factor 3B subunit 1 yes yes 2;3 0.00010986 104.88 By MS/MS By MS/MS 6 6 97606000 53589000 44017000 5015 1443 5584;5585 12532;12533;12534;12535;12536;12537;12538;12539;12540;12541;12542;12543 11455;11456;11457;11458;11459;11460;11461;11462;11463;11464;11465 11458 6635;6636;6637 11 RWSWGGSAMANSESK LADDYQQKRWSWGGSA AMANSESKTANKRSAS K R W S K T 2 1 1 0 0 0 1 2 0 0 0 1 1 0 0 4 0 2 0 0 0 0 15 1 1652.7365 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 163 177 MAP7D3 MAP7 domain-containing protein 3 yes no 3 0.0046554 56.719 By MS/MS By matching 1 1 3220900 1889600 1331300 5016 195 5586 12544;12545 11466 11466 353 1 RYEDDGISDDEIEGK ________________ SDDEIEGKRTFDLEEK R R Y G K R 0 1 0 4 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 0 0 0 15 1 1739.7486 I3VM54;Q9Y2K7 I3VM54 4 18 KDM2A Lysine-specific demethylase 2A yes no 2 0.00076705 98.507 By MS/MS By MS/MS 1 1 16461000 7409100 9052300 5017 1216 5587 12546;12547 11467;11468 11468 2203 2 RYEDDGISDDEIEGKR ________________ DDEIEGKRTFDLEEKL R R Y K R T 0 2 0 4 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 0 0 0 16 2 1895.8497 I3VM54;Q9Y2K7 I3VM54 4 19 KDM2A Lysine-specific demethylase 2A yes no 3 9.7449E-05 105.46 By MS/MS By MS/MS 1 2 39244000 17516000 21727000 5018 1216 5588 12548;12549;12550 11469;11470 11470 2203 2 RYGPKSEAAAPHTDAGGGLSSDEEEGTSSQAEAAR LIRERLKRRYGPKSEA SSQAEAARILAASWPQ R R Y A R I 7 2 0 2 0 1 5 5 1 0 1 1 0 0 2 5 2 0 1 0 0 0 35 2 3488.5676 Q01831 Q01831 864 898 XPC DNA repair protein complementing XP-C cells yes yes 4 0.0012534 48.576 By MS/MS 1 11755000 11755000 0 5019 1834 5589 12551 11471;11472 11472 3433;3434 2 RYPSSISSSPQK EQRSTQTRRYPSSISS SISSSPQKDLTQAKNG R R Y Q K D 0 1 0 0 0 1 0 0 0 1 0 1 0 0 2 5 0 0 1 0 0 0 12 1 1335.6783 F8W726;Q14157 F8W726 612 623 UBAP2L Ubiquitin-associated protein 2-like yes no 2 4.7405E-27 178.22 By MS/MS By MS/MS 2 2 154940000 78727000 76214000 5020 937 5590;5591 12552;12553;12554;12555 11473;11474;11475;11476;11477 11475 1684;1685;1686;1687 5 RYPSSISSSPQKDLTQAK EQRSTQTRRYPSSISS QKDLTQAKNGFSSVQA R R Y A K N 1 1 0 1 0 2 0 0 0 1 1 2 0 0 2 5 1 0 1 0 0 0 18 2 1992.0276 F8W726;Q14157 F8W726 612 629 UBAP2L Ubiquitin-associated protein 2-like yes no 3 5.4237E-20 136.53 By MS/MS By MS/MS 1 1 128070000 73654000 54413000 5021 937 5592 12556;12557 11478;11479 11479 1684;1685;1686;1687 2 RYSDFEWLR LKESTVRRRYSDFEWL YSDFEWLRSELERESK R R Y L R S 0 2 0 1 0 0 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 0 9 1 1270.6095 O60493 O60493 70 78 SNX3 Sorting nexin-3 yes yes 2 0.0096249 88.338 By MS/MS By MS/MS 1 1 9136400 4138700 4997600 5022 1411 5593 12558;12559 11480;11481 11480 2601 2 RYSDHAGPAIPSVVAYPK VSSSQKQRRYSDHAGP PSVVAYPKRSQTSTAD R R Y P K R 3 1 0 1 0 0 0 1 1 1 0 1 0 0 3 2 0 0 2 2 0 0 18 1 1926.9952 A0A0A0MQR8;A0A0A0MSZ1;A0A0A0MT23;J3KNR0;P27448;A0A0A0MST9;H0YIY6 A0A0A0MQR8 401 418 MARK3 MAP/microtubule affinity-regulating kinase 3 yes no 3 0.0013194 61.821 By MS/MS By MS/MS 1 1 9589700 4413600 5176100 5023 160 5594 12560;12561 11482;11483 11483 290;7188 2 RYSDKYNVPISSADIAQNQEFYK HTVGPIRRRYSDKYNV AQNQEFYKNAEVRPPF R R Y Y K N 2 1 2 2 0 2 1 0 0 2 0 2 0 1 1 3 0 0 3 1 0 0 23 2 2735.3191 G5E965;H0Y882;C9J0F0;E9PFD3;A0A087X299;Q9H334;A0A0B4J2F3 G5E965 438 460 FOXP1 Forkhead box protein P1 yes no 3 1.0864E-05 78.128 By MS/MS By MS/MS 1 1 21403000 10919000 10485000 5024 147 5595 12562;12563 11484;11485 11484 253;7183 2 RYSPPIQR RRRSPSPRRYSPPIQR RYSPPIQRRYSPSPPP R R Y Q R R 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 8 1 1015.5563 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 604 611 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2;3 0.00040049 161.51 By MS/MS By MS/MS 2 2 445960000 240000000 205960000 5025 442;1311 5596 12564;12565;12566;12567 11486;11487;11488;11489;11490;11491;11492 11487 858 7 RYSPSPPPK RYSPPIQRRYSPSPPP YSPSPPPKRRTASPPP R R Y P K R 0 1 0 0 0 0 0 0 0 0 0 1 0 0 4 2 0 0 1 0 0 0 9 1 1027.5451 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 612 620 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2;3 0.012525 91.307 By MS/MS By MS/MS 2 2 101810000 60168000 41640000 5026 442;1311 5597 12568;12569;12570;12571 11493;11494;11495;11496;11497 11496 859;860 5 SAAATSPAPHLVAGPLLGTVGK SLVYSDKKSAAATSPA PLLGTVGKAPATVTNL K S A G K A 5 0 0 0 0 0 0 3 1 0 3 1 0 0 3 2 2 0 0 2 0 0 22 0 2014.1211 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 1643 1664 CIC Protein capicua homolog yes no 3 0.0020324 60.032 By MS/MS By MS/MS 1 1 6327300 3664500 2662900 5027 1207 5598 12572;12573 11498;11499 11498 2191;6556 2 SAADSISESVPVGPK AMDISEGRSAADSISE ESVPVGPKVRDGPGKY R S A P K V 2 0 0 1 0 0 1 1 0 1 0 1 0 0 2 4 0 0 0 2 0 0 15 0 1442.7253 P45974 P45974 779 793 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 0.00046307 88.73 By MS/MS By MS/MS 1 1 14937000 8751000 6185600 5028 1703 5599 12574;12575 11500;11501 11500 3137 2 SAAEPVASTPASRIQPAGNTSPR GATANRLRSAAEPVAS PAGNTSPRAISRVDRE R S A P R A 5 2 1 0 0 1 1 1 0 1 0 0 0 0 4 4 2 0 0 1 0 0 23 1 2264.1509 H0Y5S9;H0Y682;P49674 H0Y5S9 46 68 CSNK1E Casein kinase I isoform epsilon yes no 3 0.014675 44.743 By MS/MS By MS/MS 1 1 14822000 6275600 8546100 5029 1028 5600 12576;12577 11502;11503 11503 1911 2 SAAQAAAQTNSNAAGK GVGGPGAKSAAQAAAQ TNSNAAGKQLRKESQK K S A G K Q 7 0 2 0 0 2 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 16 0 1459.7015 Q8NC51 Q8NC51 53 68 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.011391 69.069 By MS/MS By MS/MS 1 1 8571200 3533500 5037700 5030 2335 5601 12578;12579 11504;11505 11505 4676 2 SAASPVVSSMPER ASDVGRDRSAASPVVS VVSSMPERASESSSEE R S A E R A 2 1 0 0 0 0 1 0 0 0 0 0 1 0 2 4 0 0 0 2 0 0 13 0 1316.6395 P18583;H7C1M2 P18583 1766 1778 SON Protein SON yes no 2 0.00016019 113.54 By MS/MS 1 8461500 8461500 0 5031 1600 5602 12580 11506 11506 2943 1 SADFTNFDPR DSIKTKGKSADFTNFD DFTNFDPRGLLPESLD K S A P R G 1 1 1 2 0 0 0 0 0 0 0 0 0 2 1 1 1 0 0 0 0 0 10 0 1168.5149 P00918 P00918 172 181 CA2 Carbonic anhydrase 2 yes yes 2 0.0036368 91.853 By MS/MS By MS/MS 1 1 4698500 2202800 2495700 5032 1514 5603 12581;12582 11507;11508 11508 2 SADGSAPAGEGEGVTLQR REKMLAAKSADGSAPA GEGVTLQRNITLLNGV K S A Q R N 3 1 0 1 0 1 2 4 0 0 1 0 0 0 1 2 1 0 0 1 0 0 18 0 1700.7966 Q01650 Q01650 31 48 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 2 0.002221 69.069 By MS/MS By MS/MS 1 1 6723500 3291300 3432200 5033 1832 5604 12583;12584 11509;11510;11511;11512 11509 3430 4 SADTLWGIQK EEEARLKKSADTLWGI DTLWGIQKELQF____ K S A Q K E 1 0 0 1 0 1 0 1 0 1 1 1 0 0 0 1 1 1 0 0 0 0 10 0 1117.5768 P00338 P00338 319 328 LDHA L-lactate dehydrogenase A chain yes yes 2 0.0040551 89.698 By MS/MS 1 943740 943740 0 5034 1509 5605 12585 11513 11513 1 SADVSPTTEGVK PFKLKVIRSADVSPTT SPTTEGVKRRVKSPGS R S A V K R 1 0 0 1 0 0 1 1 0 0 0 1 0 0 1 2 2 0 0 2 0 0 12 0 1189.5826 A0A0J9YX34;Q9C040 A0A0J9YX34 424 435 TRIM2 Tripartite motif-containing protein 2 yes no 2 0.012775 77.279 By MS/MS By MS/MS 1 1 2983700 2983700 0 5035 330 5606 12586;12587 11514;11515 11515 617 2 SADVSPTTEGVKR PFKLKVIRSADVSPTT PTTEGVKRRVKSPGSG R S A K R R 1 1 0 1 0 0 1 1 0 0 0 1 0 0 1 2 2 0 0 2 0 0 13 1 1345.6838 A0A0J9YX34;Q9C040 A0A0J9YX34 424 436 TRIM2 Tripartite motif-containing protein 2 yes no 3 0.018309 46.481 By MS/MS 1 2610900 2610900 0 5036 330 5607 12588 11516 11516 617 1 SAEDELAMR PGGELRRRSAEDELAM AEDELAMRGFLQEGDL R S A M R G 2 1 0 1 0 0 2 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 9 0 1020.4546 Q13868;A3KFL1;A3KFL5;A3KFL2 Q13868 124 132 EXOSC2 Exosome complex component RRP4 yes no 2 0.0018315 128.03 By MS/MS 1 2055700 2055700 0 5037 1933 5608 12589 11517 11517 3730 1 SAEEAPLYSK TGTGTGARSAEEAPLY EEAPLYSKVTPRAQRP R S A S K V 2 0 0 0 0 0 2 0 0 0 1 1 0 0 1 2 0 0 1 0 0 0 10 0 1093.5292 E7EMB8;Q99952 E7EMB8 187 196 PTPN18 Tyrosine-protein phosphatase non-receptor type 18 yes no 2 2.0343E-05 141.52 By MS/MS By MS/MS 1 1 8396300 4674900 3721500 5038 703 5609 12590;12591 11518;11519 11518 1248;7351 2 SAEEAPLYSKVTPR TGTGTGARSAEEAPLY LYSKVTPRAQRPGAHA R S A P R A 2 1 0 0 0 0 2 0 0 0 1 1 0 0 2 2 1 0 1 1 0 0 14 1 1546.7991 E7EMB8;Q99952 E7EMB8 187 200 PTPN18 Tyrosine-protein phosphatase non-receptor type 18 yes no 2;3 0.0011365 76.728 By MS/MS By MS/MS 2 2 27905000 12790000 15116000 5039 703 5610 12592;12593;12594;12595 11520;11521;11522 11521 1248;7351 2 SAEEEAADLPTKPTK SSRSAEKRSAEEEAAD DLPTKPTKISKFGFAI R S A T K I 3 0 0 1 0 0 3 0 0 0 1 2 0 0 2 1 2 0 0 0 0 0 15 1 1585.7835 Q8WW12 Q8WW12 53 67 PCNP PEST proteolytic signal-containing nuclear protein yes yes 2 0.0030398 73.296 By MS/MS 1 2249400 2249400 0 5040 2405 5611 12596 11523 11523 4811 1 SAEPSANTTLVSETEEEGSVPAFGAAAK LSGKSPRKSAEPSANT PAFGAAAKPGMVSAGQ K S A A K P 6 0 1 0 0 0 5 2 0 0 1 1 0 1 2 4 3 0 0 2 0 0 28 0 2749.293 Q13428;J3KQ96;E7ETY2 Q13428 160 187 TCOF1 Treacle protein yes no 3 0.00014007 65.775 By MS/MS By MS/MS 1 1 16114000 7478600 8635400 5041 1915 5612 12597;12598 11524;11525 11525 3680;6794;6795 2 SAESPTSPVTSETGSTFK KQEKEPSKSAESPTSP SETGSTFKKFFTQGWA K S A F K K 1 0 0 0 0 0 2 1 0 0 0 1 0 1 2 5 4 0 0 1 0 0 18 0 1811.8425 Q02952 Q02952 280 297 AKAP12 A-kinase anchor protein 12 yes yes 2 0.0070012 71.558 By MS/MS By matching 1 1 26708000 15480000 11228000 5042 1843 5613 12599;12600 11526 11526 6765 1 SAFSNLFGGEPLSYTR ________________ GEPLSYTRFSLARQVD R S A T R F 1 1 1 0 0 0 1 2 0 0 2 0 0 2 1 3 1 0 1 0 0 0 16 0 1744.842 F8WBE5;P02786 F8WBE5 7 22 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 2 3.5765E-29 161.25 By MS/MS By MS/MS 1 1 34470000 20088000 14382000 5043 946 5614 12601;12602 11527;11528;11529 11528 1715;7416 3 SAFTPATATGSSPSPVLGQGEK SAGQLRQRSAFTPATA PVLGQGEKVEGLQAQA R S A E K V 3 0 0 0 0 1 1 3 0 0 1 1 0 1 3 4 3 0 0 1 0 0 22 0 2089.0328 F8W7U0;Q15811;CON__ENSEMBL:ENSBTAP00000001528 F8W7U0 891 912 ITSN1 Intersectin-1 no no 2 0.0018669 62.287 By matching By MS/MS 1 1 4672000 2184800 2487200 + 5044 939;628 5615 12603;12604 11530 11530 1147 1 SAGAPASVSGQDADGSTSPR EKLARELRSAGAPASV ADGSTSPRSQEP____ R S A P R S 4 1 0 2 0 1 0 3 0 0 0 0 0 0 2 5 1 0 0 1 0 0 20 0 1816.8187 K7EQY5;P42679 K7EQY5 483 502 MATK Non-specific protein-tyrosine kinase;Megakaryocyte-associated tyrosine-protein kinase yes no 2 1.0918E-08 102.24 By MS/MS By matching 1 1 12868000 7986000 4882000 5045 1286 5616 12605;12606 11531 11531 2318;6576 1 SAGEEEDGPVLTDEQK PSLDQWHRSAGEEEDG PVLTDEQKSRIQAMKP R S A Q K S 1 0 0 2 0 1 4 2 0 0 1 1 0 0 1 1 1 0 0 1 0 0 16 0 1702.7534 F5GYV5;H7BZV4;A0A0C4DG62;F8WCT1;F5H7X4;Q66PJ3 F5GYV5 140 155 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 2 1.199E-44 174.24 By MS/MS By MS/MS 1 1 206580000 113100000 93478000 5046 281 5617 12607;12608 11532;11533 11532 501 2 SAGEEEDGPVLTDEQKSR PSLDQWHRSAGEEEDG LTDEQKSRIQAMKPMT R S A S R I 1 1 0 2 0 1 4 2 0 0 1 1 0 0 1 2 1 0 0 1 0 0 18 1 1945.8865 F5GYV5;H7BZV4;A0A0C4DG62;F8WCT1;F5H7X4;Q66PJ3 F5GYV5 140 157 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 3 0.0085419 51.688 By MS/MS By matching 1 1 10936000 4806400 6129300 5047 281 5618 12609;12610 11534 11534 501 1 SAGGRPGSGPQLGTGR GWDMISQRSAGGRPGS GPQLGTGRGTLRLRSR R S A G R G 1 2 0 0 0 1 0 6 0 0 1 0 0 0 2 2 1 0 0 0 0 0 16 1 1453.7386 K7EM11;K7ESN1;O14908 K7EM11 20 35 GIPC1 PDZ domain-containing protein GIPC1 yes no 2;3 0.00057124 83.894 By MS/MS By MS/MS 2 2 44031000 19255000 24776000 5048 1281 5619 12611;12612;12613;12614 11535;11536;11537 11537 2313 3 SAGGSSPEGGEDSDREDGNYCPPVKR QKDKGQKRSAGGSSPE NYCPPVKRERTSSLTQ R S A K R E 1 2 1 3 1 0 3 5 0 0 0 1 0 0 3 4 0 0 1 1 0 0 26 2 2722.1525 B7Z7F3;Q9H6Z4;K7EID7;K7ENB9 B7Z7F3 28 53 RANBP3 Ran-binding protein 3 yes no 3 0.011001 47.472 By MS/MS By matching 1 1 80899000 48293000 32606000 5049 515 5620 12615;12616 11538 11538 956 1 SAGRKSSMDGAQNQDDGYLALSSR KSSALVSRSAGRKSSM GYLALSSRTNLQYRSL R S A S R T 3 2 1 3 0 2 0 3 0 0 2 1 1 0 0 5 0 0 1 0 0 0 24 2 2513.1565 E9PNV5;A0A0A0MTL4;A0A0A0MTE8;Q8IVL1 E9PNV5 248 271 NAV2 Neuron navigator 2 yes no 4 0.017122 46.938 By MS/MS 1 2470300 2470300 0 5050 244 5621 12617 11539 11539 25 444 0 SAGSMCITQFMK TPISLKRKSAGSMCIT MCITQFMKKRRHDGQI K S A M K K 1 0 0 0 1 1 0 1 0 1 0 1 2 1 0 2 1 0 0 0 0 0 12 0 1359.5985 Q13111 Q13111 873 884 CHAF1A Chromatin assembly factor 1 subunit A yes yes 2 0.002594 89.43 By MS/MS By MS/MS 1 1 886520 0 886520 5051 1896 5622 12618;12619 11540;11541 11540 3618 2 SAGWREHMER PHSPDGPRSAGWREHM GWREHMERRRRFEFDF R S A E R R 1 2 0 0 0 0 2 1 1 0 0 0 1 0 0 1 0 1 0 0 0 0 10 1 1257.5673 I1E4Y6;Q6Y7W6;C9JH78;C9IYH5;F8WBF1;B8ZZD2 I1E4Y6 264 273 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 3 0.0058864 68.676 By MS/MS 1 10778000 0 10778000 5052 1194 5623 12620 11542 11542 2169 1 SAKPETVIDSLLQ PKTGRRKRSAKPETVI TVIDSLLQ________ R S A L Q - 1 0 0 1 0 1 1 0 0 1 2 1 0 0 1 2 1 0 0 1 0 0 13 1 1399.7559 H7C2F6;J3KPF9;A0A087X011;E9PES4;Q9Y496 H7C2F6 173 185 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A yes no 2 2.0969E-29 180.95 By MS/MS By MS/MS 1 1 34046000 17473000 16574000 5053 120 5624 12621;12622 11543;11544 11543 215 2 SALSPSKSPAK TGFNFSFKSALSPSKS SPSKSPAKLNQSGTSV K S A A K L 2 0 0 0 0 0 0 0 0 0 1 2 0 0 2 4 0 0 0 0 0 0 11 1 1071.5924 P49792;Q7Z3J3 P49792 2273 2283 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 yes no 2 0.0032584 89.663 By MS/MS By MS/MS 1 1 8565900 4785400 3780400 5054 1730 5625 12623;12624 11545;11546 11546 3265 2 SALSSSLR ASGEGLKRSALSSSLR SALSSSLRDLSEAGKR R S A L R D 1 1 0 0 0 0 0 0 0 0 2 0 0 0 0 4 0 0 0 0 0 0 8 0 819.44503 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 906 913 IQSEC1 IQ motif and SEC7 domain-containing protein 1 no no 2 0.01795 74.841 By MS/MS By MS/MS 2 2 13361000 6987900 6373000 5055 78;299 5626 12625;12626;12627;12628 11547;11548 11548 139;140;534;535 2 SALSSSLRDLSEAGVHH ASGEGLKRSALSSSLR LSEAGVHH________ R S A H H - 2 1 0 1 0 0 1 1 2 0 3 0 0 0 0 5 0 0 0 1 0 0 17 1 1764.8755 A0A0C4DGT3 A0A0C4DGT3 798 814 IQSEC1 yes yes 3 0.014156 48.823 By MS/MS By matching 1 1 27131000 13767000 13364000 5056 299 5627 12629;12630 11549 11549 534;535 1 SAMDSPVPASMFAPEPSSPGAAR ________________ PSSPGAARAAAAAARL R S A A R A 5 1 0 1 0 0 1 1 0 0 0 0 2 1 5 5 0 0 0 1 0 0 23 0 2259.03 O00178;F8WAZ4 O00178 8 30 GTPBP1 GTP-binding protein 1 yes no 2;3 1.6525E-42 139.2 By MS/MS By MS/MS 8 9 277570000 134180000 143390000 5057 1322 5628;5629;5630 12631;12632;12633;12634;12635;12636;12637;12638;12639;12640;12641;12642;12643;12644;12645;12646;12647 11550;11551;11552;11553;11554;11555;11556;11557;11558;11559;11560;11561 11554 149;150 2384;2385 12 SAMDSPVPASMFAPEPSSPGAARAAAAAAR ________________ RAAAAAARLHGGFDSD R S A A R L 11 2 0 1 0 0 1 1 0 0 0 0 2 1 5 5 0 0 0 1 0 0 30 1 2841.3538 O00178;F8WAZ4 O00178 8 37 GTPBP1 GTP-binding protein 1 yes no 3 2.6889E-30 105.65 By matching By MS/MS 1 1 22004000 11786000 10218000 5058 1322 5631 12648;12649 11562 11562 149;150 2384;2385 1 SAMPFTASPASSTTAR HIGSAHNRSAMPFTAS PASSTTARVITNQYNN R S A A R V 4 1 0 0 0 0 0 0 0 0 0 0 1 1 2 4 3 0 0 0 0 0 16 0 1581.7457 O00151 O00151 123 138 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 2.9464E-06 114.27 By MS/MS By MS/MS 2 2 73519000 38443000 35077000 5059 1321 5632;5633 12650;12651;12652;12653 11563;11564;11565;11566;11567 11563 148 2378 5 SAMQNYER LNSVAYERSAMQNYER SAMQNYERRR______ R S A E R R 1 1 1 0 0 1 1 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 8 0 997.42873 P20366 P20366 120 127 TAC1 Protachykinin-1;Substance P;Neurokinin A;Neuropeptide K;Neuropeptide gamma;C-terminal-flanking peptide yes yes 2 0.019211 47.082 By MS/MS 1 0 0 0 5060 1611 5634 12654 11568 11568 7574 1 SANPTRPSSPVTSHISK SPLRSPIRSANPTRPS PVTSHISKVLFGEDDS R S A S K V 1 1 1 0 0 0 0 0 1 1 0 1 0 0 3 5 2 0 0 1 0 0 17 1 1764.9119 F8W6N3;Q92560;H0Y8E8 F8W6N3 495 511 BAP1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase BAP1 yes no 3 0.0035235 59.862 By MS/MS By matching 1 1 19417000 9823200 9594200 5061 934 5635 12655;12656 11569 11569 1678;1679 1 SAPASPTHPGLMSPR PFGPLSSRSAPASPTH HPGLMSPRSGGLQTPE R S A P R S 2 1 0 0 0 0 0 1 1 0 1 0 1 0 4 3 1 0 0 0 0 0 15 0 1504.7456 P85037 P85037 416 430 FOXK1 Forkhead box protein K1 yes yes 2;3 3.7523E-06 118.55 By MS/MS By MS/MS 10 11 314040000 171340000 142700000 5062 1818 5636;5637;5638;5639 12657;12658;12659;12660;12661;12662;12663;12664;12665;12666;12667;12668;12669;12670;12671;12672;12673;12674;12675;12676;12677 11570;11571;11572;11573;11574;11575;11576;11577;11578;11579;11580;11581;11582;11583;11584;11585;11586;11587;11588;11589;11590 11580 235 3397;3398;3399;6758 21 SAPDLKESGAAV PPRMRRQRSAPDLKES LKESGAAV________ R S A A V - 3 0 0 1 0 0 1 1 0 0 1 1 0 0 1 2 0 0 0 1 0 0 12 1 1143.5772 O43896 O43896 1092 1103 KIF1C Kinesin-like protein KIF1C yes yes 2 0.0059528 75.911 By MS/MS By matching 1 1 12552000 6166500 6385600 5063 1398 5640 12678;12679 11591 11591 2567 1 SAPTSPTATNISSK PPRKNCHKSAPTSPTA TATNISSKTIPVKSPN K S A S K T 2 0 1 0 0 0 0 0 0 1 0 1 0 0 2 4 3 0 0 0 0 0 14 0 1360.6834 H0YN99;Q9H792;H3BUZ5 H0YN99 568 581 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.0039414 71.316 By MS/MS By matching 1 1 19904000 11270000 8634400 5064 1102 5641 12680;12681 11592 11592 2026 1 SAQGSSSPVPSMVQK VLPSPSGRSAQGSSSP PVPSMVQKSPRITPPA R S A Q K S 1 0 0 0 0 2 0 1 0 0 0 1 1 0 2 5 0 0 0 2 0 0 15 0 1488.7242 A0A0A0MSW3;P35658 A0A0A0MSW3 80 94 NUP214 Nuclear pore complex protein Nup214 yes no 2 2.3296E-28 158.29 By MS/MS By MS/MS 1 1 50143000 27665000 22479000 5065 226 5642 12682;12683 11593;11594 11594 410 2 SAQWLDQEEAPK ILYDNRRRSAQWLDQE LDQEEAPKHFPKPILH R S A P K H 2 0 0 1 0 2 2 0 0 0 1 1 0 0 1 1 0 1 0 0 0 0 12 0 1400.6572 Q53H47 Q53H47 508 519 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase yes yes 2 0.00067343 106.29 By MS/MS By MS/MS 1 1 5617200 2947600 2669500 5066 2058 5643 12684;12685 11595;11596 11595 4045 2 SASADNLTLPR LRRSARKRSASADNLT ADNLTLPRWSPAIIS_ R S A P R W 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 2 1 0 0 0 0 0 11 0 1143.5884 Q8ND76 Q8ND76 324 334 CCNY Cyclin-Y yes yes 2 4.1406E-21 174.21 By MS/MS By MS/MS 1 1 56542000 30674000 25868000 5067 2342 5644 12686;12687 11597;11598;11599;11600 11600 4695 4 SASASHQADIK RPPKSARRSASASHQA ASHQADIKEARREVEV R S A I K E 3 0 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1113.5415 C9JXK0;Q14739 C9JXK0 97 107 LBR Lamin-B receptor yes no 2 0.00011972 115.12 By MS/MS By MS/MS 1 1 63235000 31014000 32222000 5068 615 5645 12688;12689 11601;11602;11603;11604 11603 1122;1123 4 SASASHQADIKEAR RPPKSARRSASASHQA QADIKEARREVEVKLT R S A A R R 4 1 0 1 0 1 1 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 14 1 1469.7223 C9JXK0;Q14739 C9JXK0 97 110 LBR Lamin-B receptor yes no 3 3.1829E-09 129.05 By MS/MS By MS/MS 1 1 69155000 33053000 36102000 5069 615 5646 12690;12691 11605;11606 11606 1122;1123 2 SASASHQADIKEARR RPPKSARRSASASHQA ADIKEARREVEVKLTP R S A R R E 4 2 0 1 0 1 1 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 15 2 1625.8234 C9JXK0;Q14739 C9JXK0 97 111 LBR Lamin-B receptor yes no 3;4 0.0078184 59.502 By matching By MS/MS 1 2 28935000 2694200 26241000 5070 615 5647 12692;12693;12694 11607;11608 11608 1122;1123 2 SASDSGCDPASKK GKDGRRRKSASDSGCD GCDPASKKLKGDRGEV K S A K K L 2 0 0 2 1 0 0 1 0 0 0 2 0 0 1 4 0 0 0 0 0 0 13 1 1308.5616 Q7LBC6;H0Y9V5 Q7LBC6 289 301 KDM3B Lysine-specific demethylase 3B yes no 2 0.0095156 71.933 By MS/MS By MS/MS 1 1 11906000 5520200 6385900 5071 2204 5648 12695;12696 11609;11610 11610 4393;4394 1 SASEPSLNR RSLPKIHRSASEPSLN ASEPSLNRAGFQTEDF R S A N R A 1 1 1 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 0 0 0 9 0 959.46722 P15056;H7C560 P15056 727 735 BRAF Serine/threonine-protein kinase B-raf yes no 2 0.0020383 117.71 By MS/MS By MS/MS 1 1 25660000 13248000 12412000 5072 1581 5649 12697;12698 11611;11612 11612 2903 2 SASITNLSLDR GKSPARNRSASITNLS ITNLSLDRSGSPMVPS R S A D R S 1 1 1 1 0 0 0 0 0 1 2 0 0 0 0 3 1 0 0 0 0 0 11 0 1175.6146 E9PDH4;Q9Y2I7 E9PDH4 305 315 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes no 2 0.0013337 98.902 By MS/MS By MS/MS 1 1 30186000 16596000 13589000 5073 770 5650 12699;12700 11613;11614 11613 1395 2 SASLGSQQLLGLPR DTHFLHLRSASLGSQQ QQLLGLPRDPGSSVSG R S A P R D 1 1 0 0 0 2 0 2 0 0 4 0 0 0 1 3 0 0 0 0 0 0 14 0 1425.794 Q8IZJ1 Q8IZJ1 526 539 UNC5B Netrin receptor UNC5B yes yes 2 0.0025989 78.401 By MS/MS By MS/MS 1 1 4438100 2345400 2092700 5074 2292 5651 12701;12702 11615;11616 11615 4601;4602 2 SASLSHPGGEGEPAR RPPATHPRSASLSHPG GGEGEPARSRAPAPGT R S A A R S 2 1 0 0 0 0 2 3 1 0 1 0 0 0 2 3 0 0 0 0 0 0 15 0 1450.6801 C9JXU1;A6NN40;Q2M3G4 C9JXU1 186 200 SHROOM1 Protein Shroom1 yes no 2;3 8.0861E-10 127.3 By MS/MS By MS/MS 2 2 18823000 9273200 9549900 5075 422 5652 12703;12704;12705;12706 11617;11618;11619 11619 793 2 SASLSNLHSLDR PKKTPPRKSASLSNLH SNLHSLDRSTREVELG K S A D R S 1 1 1 1 0 0 0 0 1 0 3 0 0 0 0 4 0 0 0 0 0 0 12 0 1298.6579 B0QY53;B0QY54;Q9Y3M2;A0A087WUW0 B0QY53 18 29 CBY1 Protein chibby homolog 1 yes no 2 0.0007722 105.19 By MS/MS By MS/MS 1 1 47402000 27196000 20207000 5076 444 5653 12707;12708 11620;11621 11620 872 2 SASNVPSGKSTDEEEEAQTPQAPR STLGEETKSASNVPSG AQTPQAPRTLGPSPPA K S A P R T 3 1 1 1 0 2 4 1 0 0 0 1 0 0 3 4 2 0 0 1 0 0 24 1 2514.147 Q9P2K3 Q9P2K3 366 389 RCOR3 REST corepressor 3 yes yes 3 0.0026052 54.728 By MS/MS By MS/MS 2 1 10865000 7357500 3507800 5077 2794 5654;5655 12709;12710;12711 11622;11623;11624 11622 5732;5733;7081 2 SASPDDDLGSSNWEAADLGNEER SHPHGVKRSASPDDDL ADLGNEERKQKFLRLM R S A E R K 3 1 2 4 0 0 3 2 0 0 2 0 0 0 1 4 0 1 0 0 0 0 23 0 2434.0157 O00193;E9PM92;E9PQA1 O00193 15 37 SMAP;C11orf58 Small acidic protein yes no 2;3 2.6706E-15 108.25 By MS/MS By MS/MS 2 2 1662100000 958550000 703560000 5078 1324 5656 12712;12713;12714;12715 11625;11626;11627;11628;11629 11625 2388;2389 5 SASPDDDLGSSNWEAADLGNEERK SHPHGVKRSASPDDDL DLGNEERKQKFLRLMG R S A R K Q 3 1 2 4 0 0 3 2 0 0 2 1 0 0 1 4 0 1 0 0 0 0 24 1 2562.1106 O00193;E9PM92;E9PQA1 O00193 15 38 SMAP;C11orf58 Small acidic protein yes no 3 5.3185E-14 99.423 By MS/MS By MS/MS 1 1 253720000 149290000 104430000 5079 1324 5657 12716;12717 11630;11631 11631 2388;2389 2 SASPDDDLGSSNWEAADLGNEERKQK SHPHGVKRSASPDDDL GNEERKQKFLRLMGAG R S A Q K F 3 1 2 4 0 1 3 2 0 0 2 2 0 0 1 4 0 1 0 0 0 0 26 2 2818.2642 O00193;E9PM92;E9PQA1 O00193 15 40 SMAP;C11orf58 Small acidic protein yes no 3;4 6.126E-08 80.412 By MS/MS By MS/MS 2 2 372060000 196240000 175820000 5080 1324 5658 12718;12719;12720;12721 11632;11633;11634 11633 2388;2389 3 SASPHDVDLCLVSPCEFEHR LRGPRARRSASPHDVD SPCEFEHRKAVPMAPA R S A H R K 1 1 0 2 2 0 2 0 2 0 2 0 0 1 2 3 0 0 0 2 0 0 20 0 2354.042 Q66K74 Q66K74 729 748 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3 0.017449 45.221 By MS/MS By MS/MS 1 1 10688000 6049300 4639000 5081 2131 5659 12722;12723 11635;11636 11635 4242;4243 2 SASPYPSHSLSSPQR TLTPPLRRSASPYPSH HSLSSPQRKQSPPRHR R S A Q R K 1 1 0 0 0 1 0 0 1 0 1 0 0 0 3 6 0 0 1 0 0 0 15 0 1599.7641 Q5T200 Q5T200 370 384 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 0.0021349 63.212 By MS/MS By MS/MS 2 1 44093000 21982000 22111000 5082 2094 5660;5661 12724;12725;12726 11637;11638;11639 11639 4135;4136;4137;4138;7742 3 SASQAEEEPSVEPVKK GRQCAPIRSASQAEEE PSVEPVKKSQHRSSSS R S A K K S 2 0 0 0 0 1 4 0 0 0 0 2 0 0 2 3 0 0 0 2 0 0 16 1 1713.8421 A0A087WUH4;A0A087WWJ0;A6PVM6;A0A087WVX5;Q08289 A0A087WUH4 16 31 CACNB2 Voltage-dependent L-type calcium channel subunit beta-2 yes no 2 0.008252 68.978 By MS/MS By MS/MS 1 1 6271300 3989400 2281900 5083 47 5662 12727;12728 11640;11641 11640 78 0 SASQDCIETTPGAQEGK MARRRMPRSASQDCIE TPGAQEGKKQYKMICH R S A G K K 2 0 0 1 1 2 2 2 0 1 0 1 0 0 1 2 2 0 0 0 0 0 17 0 1777.7789 Q99767 Q99767 478 494 APBA2 Amyloid beta A4 precursor protein-binding family A member 2 yes yes 2 0.0056033 62.916 By matching By MS/MS 1 1 7366700 3681600 3685200 5084 2559 5663 12729;12730 11642 11642 5171 1 SASQSSLDKLDQELK DTEGSKQRSASQSSLD DKLDQELKEQQKELKN R S A L K E 1 0 0 2 0 2 1 0 0 0 3 2 0 0 0 4 0 0 0 0 0 0 15 1 1647.8315 A0A087X2D8;O60271 A0A087X2D8 719 733 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2;3 6.2319E-15 135.69 By MS/MS By MS/MS 4 6 169290000 75417000 93869000 5085 148 5664;5665 12731;12732;12733;12734;12735;12736;12737;12738;12739;12740 11643;11644;11645;11646;11647;11648;11649;11650;11651;11652 11647 257;258;259 10 SASQSSLDKLDQELKEQQK DTEGSKQRSASQSSLD QELKEQQKELKNQEEL R S A Q K E 1 0 0 2 0 4 2 0 0 0 3 3 0 0 0 4 0 0 0 0 0 0 19 2 2161.0863 A0A087X2D8;O60271 A0A087X2D8 719 737 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 3 3.8084E-06 88.951 By MS/MS By MS/MS 2 2 94017000 47440000 46577000 5086 148 5666;5667 12741;12742;12743;12744 11653;11654;11655;11656 11655 257;258;259 4 SASSASSLFSPSSTLFSSSR PGAEAKYRSASSASSL STLFSSSRLRYGMSDV R S A S R L 2 1 0 0 0 0 0 0 0 0 2 0 0 2 1 11 1 0 0 0 0 0 20 0 1991.9436 Q5T1Z4;Q5T1Z8;Q14671;E9PR38;H0YDK8;H0YEH2 Q5T1Z4 798 817 PUM1 Pumilio homolog 1 yes no 2;3 7.164E-09 96.487 By MS/MS By MS/MS 2 2 41449000 22704000 18745000 5087 1950 5668 12745;12746;12747;12748 11657;11658;11659 11657 3766 3 SASSDTSEELNSQDSPPK SPRPALVRSASSDTSE NSQDSPPKQDSTAPSS R S A P K Q 1 0 1 2 0 1 2 0 0 0 1 1 0 0 2 6 1 0 0 0 0 0 18 0 1877.8127 J3QRP6;O14745 J3QRP6 169 186 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 2 0.0049923 63.145 By MS/MS By matching 1 1 10653000 6168500 4484400 5088 1256 5669 12749;12750 11660 11660 2274 1 SASSEEASESPTAR PCTPSKSRSASSEEAS ASESPTARQIPPEARR R S A A R Q 3 1 0 0 0 0 3 0 0 0 0 0 0 0 1 5 1 0 0 0 0 0 14 0 1407.6114 A0A075B6Q3 A0A075B6Q3 1067 1080 BCORL1 yes yes 2 0.0012446 87.647 By MS/MS 1 2198700 2198700 0 5089 8 5670 12751 11661 11661 21 1 SASSGAEGDVSSEREP NTPRKEDRSASSGAEG DVSSEREP________ R S A E P - 2 1 0 1 0 0 3 2 0 0 0 0 0 0 1 5 0 0 0 1 0 0 16 1 1563.6649 Q8TEA8 Q8TEA8 194 209 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 2 3.7648E-84 204.81 By MS/MS By MS/MS 2 2 222090000 120440000 101650000 5090 2385 5671 12752;12753;12754;12755 11662;11663;11664;11665;11666;11667 11662 4769;4770 6 SASSGLGEFNAR CERPGRGRSASSGLGE GLGEFNARAREVELEH R S A A R A 2 1 1 0 0 0 1 2 0 0 1 0 0 1 0 3 0 0 0 0 0 0 12 0 1194.5629 Q86YS3 Q86YS3 525 536 RAB11FIP4 Rab11 family-interacting protein 4 yes yes 2 9.5592E-07 122.46 By MS/MS By MS/MS 1 1 6869800 3332300 3537600 5091 2257 5672 12756;12757 11668;11669 11668 4528 2 SASSLNHTILAGVHSNDHSVV GPTEGSDRSASSLNHT HSNDHSVV________ R S A V V - 2 0 2 1 0 0 0 1 3 1 2 0 0 0 0 5 1 0 0 3 0 0 21 0 2144.061 Q6GPG7;Q92633 Q6GPG7 326 346 LPAR1 Lysophosphatidic acid receptor 1 yes no 3 0.00089602 65.881 By MS/MS By matching 1 1 15164000 6537000 8626800 5092 2140 5673 12758;12759 11670 11670 4255 1 SASSNSAEAGGDTVTLDDILSLK ITSPNIRRSASSNSAE LDDILSLKSGPPEGGS R S A L K S 3 0 1 3 0 0 1 2 0 1 3 1 0 0 0 5 2 0 0 1 0 0 23 0 2250.0863 Q9UGU0 Q9UGU0 1367 1389 TCF20 Transcription factor 20 yes yes 2 5.5824E-15 104.52 By MS/MS By matching 1 1 11052000 9086700 1965200 5093 2810 5674 12760;12761 11671 11671 5762 1 SASSSWLEGTSTQAK APGAGLQRSASSSWLE EGTSTQAKELRLARIT R S A A K E 2 0 0 0 0 1 1 1 0 0 1 1 0 0 0 5 2 1 0 0 0 0 15 0 1538.7213 K7EL81;Q9BZL4 K7EL81 406 420 PPP1R12C Protein phosphatase 1 regulatory subunit 12C yes no 2 9.0047E-10 127.07 By MS/MS By matching 1 1 16405000 8331000 8074200 5094 1277 5675 12762;12763 11672 11672 2311 1 SASSVEGPGGALYAR PASSDSERSASSVEGP PGGALYARVARREARP R S A A R V 3 1 0 0 0 0 1 3 0 0 1 0 0 0 1 3 0 0 1 1 0 0 15 0 1420.6947 A0A096LNX8;Q96GP6 A0A096LNX8 616 630 SCARF2 Scavenger receptor class F member 2 yes no 2 1.1276E-09 124.42 By MS/MS By MS/MS 1 1 15896000 8166300 7729300 5095 155 5676 12764;12765 11673;11674 11673 7186 2 SASTDLGTADVVLGR RGKRQALKSASTDLGT TADVVLGRVLEVTDLP K S A G R V 2 1 0 2 0 0 0 2 0 0 2 0 0 0 0 2 2 0 0 2 0 0 15 0 1460.7471 H7C0E9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5 H7C0E9 618 632 R3HDM2 R3H domain-containing protein 2 yes no 2 5.4428E-190 247.17 By MS/MS By MS/MS 1 1 50770000 30572000 20198000 5096 350 5677 12766;12767 11675;11676 11676 644;645;6313 2 SASTEKLEQGTSALIR ESKTANKRSASTEKLE QGTSALIRQMPLSSAG R S A I R Q 2 1 0 0 0 1 2 1 0 1 2 1 0 0 0 3 2 0 0 0 0 0 16 1 1689.8897 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 183 198 MAP7D3 MAP7 domain-containing protein 3 yes no 2;3 1.5492E-37 173.34 By MS/MS By MS/MS 2 2 221950000 121670000 100290000 5097 195 5678 12768;12769;12770;12771 11677;11678;11679;11680 11678 354;6273 4 SASVNKEPVSLPGIMR DNSWIRQRSASVNKEP VSLPGIMRRGESLDNL R S A M R R 1 1 1 0 0 0 1 1 0 1 1 1 1 0 2 3 0 0 0 2 0 0 16 1 1683.8978 E9PMS6;A0A0A0MTE2;E9PMT2;F8WD26;J3KP06;Q8WWI1 E9PMS6 1083 1098 LMO7 LIM domain only protein 7 yes no 2;3 8.199E-05 94.188 By MS/MS By MS/MS 2 2 12923000 7641100 5281600 5098 243 5679 12772;12773;12774;12775 11681;11682;11683 11681 442;443 3 SASVSSISLTK HSSPFHSRSASVSSIS VSSISLTKGTDEVPVP R S A T K G 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 5 1 0 0 1 0 0 11 0 1078.587 G5E9C8;Q07889 G5E9C8 1117 1127 SOS1 Son of sevenless homolog 1 yes no 2 8.7803E-06 122.55 By MS/MS By MS/MS 1 1 34770000 20775000 13995000 5099 994 5680 12776;12777 11684;11685 11685 1822 2 SASWGSADQLK AEKRSHQRSASWGSAD WGSADQLKEQIAKLRQ R S A L K E 2 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 0 1 0 0 0 0 11 0 1148.5462 Q86VQ1;H7C0Q2 Q86VQ1 221 231 GLCCI1 Glucocorticoid-induced transcript 1 protein yes no 2 0.017579 64.121 By MS/MS By matching 1 1 25773000 15443000 10330000 5100 2244 5681 12778;12779 11686 11686 4488;4489 1 SASWGSADQLKEQIAK AEKRSHQRSASWGSAD QLKEQIAKLRQQLQRS R S A A K L 3 0 0 1 0 2 1 1 0 1 1 2 0 0 0 3 0 1 0 0 0 0 16 1 1717.8635 Q86VQ1;H7C0Q2 Q86VQ1 221 236 GLCCI1 Glucocorticoid-induced transcript 1 protein yes no 2 0.00024849 102.39 By MS/MS By MS/MS 1 1 14855000 8468100 6386900 5101 2244 5682 12780;12781 11687;11688 11687 4488;4489 2 SASWGSTDQLK KKKGSHKRSASWGSTD WGSTDQLKEIAKLRQQ R S A L K E 1 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 1 1 0 0 0 0 11 0 1178.5568 Q6P1L5 Q6P1L5 271 281 FAM117B Protein FAM117B yes yes 2 0.0023273 90.614 By MS/MS By MS/MS 1 1 44118000 25060000 19058000 5102 2152 5683 12782;12783 11689;11690 11690 4286 2 SASWGSTDQLKEIAK KKKGSHKRSASWGSTD DQLKEIAKLRQQLQRS R S A A K L 2 0 0 1 0 1 1 1 0 1 1 2 0 0 0 3 1 1 0 0 0 0 15 1 1619.8155 Q6P1L5 Q6P1L5 271 285 FAM117B Protein FAM117B yes yes 2;3 0.00022641 107.69 By MS/MS By MS/MS 2 2 33702000 15194000 18508000 5103 2152 5684 12784;12785;12786;12787 11691;11692;11693;11694 11691 4286 4 SASWGSTDQLKEIAKLR KKKGSHKRSASWGSTD LKEIAKLRQQLQRSKH R S A L R Q 2 1 0 1 0 1 1 1 0 1 2 2 0 0 0 3 1 1 0 0 0 0 17 2 1889.0007 Q6P1L5 Q6P1L5 271 287 FAM117B Protein FAM117B yes yes 3 0.014844 51.524 By matching By MS/MS 1 1 4628500 2088800 2539700 5104 2152 5685 12788;12789 11695 11695 4286 1 SATDGNTSTTPPTSAK AAAAQEVRSATDGNTS TTPPTSAKKRKLNSSS R S A A K K 2 0 1 1 0 0 0 1 0 0 0 1 0 0 2 3 5 0 0 0 0 0 16 0 1534.7111 K4DI93;Q13620 K4DI93 27 42 CUL4B Cullin-4B yes no 2 4.7557E-23 151.11 By MS/MS By MS/MS 1 1 29476000 15328000 14148000 5105 1262 5686 12790;12791 11696;11697;11698;11699 11697 6568 4 SATFPNAGPR KMNTAEFKSATFPNAG TFPNAGPRHLLDDSVM K S A P R H 2 1 1 0 0 0 0 1 0 0 0 0 0 1 2 1 1 0 0 0 0 0 10 0 1016.5039 Q86X27 Q86X27 359 368 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes yes 2 0.011537 86.911 By MS/MS By MS/MS 1 1 33572000 18909000 14663000 5106 2249 5687 12792;12793 11700;11701 11700 2 SATLLYDQPLQVFTGSSSSSDLISGTK GKNIVRSKSATLLYDQ SDLISGTKAIFKFDSN K S A T K A 1 0 0 2 0 2 0 2 0 1 4 1 0 1 1 7 3 0 1 1 0 0 27 0 2801.3971 Q96RT1 Q96RT1 915 941 ERBB2IP Protein LAP2 yes yes 3 0.012808 41.188 By MS/MS By matching 1 1 7387900 5383300 2004600 5107 2536 5688 12794;12795 11702 11702 7857 1 SATLPYIKQEEFSPR PRQQESAKSATLPYIK KQEEFSPRSQNSQPEG K S A P R S 1 1 0 0 0 1 2 0 0 1 1 1 0 1 2 2 1 0 1 0 0 0 15 1 1764.9046 A0A088AWL3;O75376 A0A088AWL3 1006 1020 NCOR1 Nuclear receptor corepressor 1 yes no 3 0.0010702 73.887 By MS/MS By MS/MS 1 1 3454200 1943100 1511100 5108 151 5689 12796;12797 11703;11704 11703 270;7184 2 SATLSSTESTASEMQEEMK EDELDKVKSATLSSTE SEMQEEMKGSVEEPKP K S A M K G 2 0 0 0 0 1 4 0 0 0 1 1 2 0 0 5 3 0 0 0 0 0 19 0 2045.8769 Q02952 Q02952 640 658 AKAP12 A-kinase anchor protein 12 yes yes 2 8.4109E-20 133.16 By MS/MS By MS/MS 2 2 39233000 21690000 17543000 5109 1843 5690;5691 12798;12799;12800;12801 11705;11706;11707;11708 11705 3459;3460;6766 4 SATRPSPSPERSSTGPEPPAPTPLLAER KDKDKKEKSATRPSPS PTPLLAERHGGSPQPL K S A E R H 3 3 0 0 0 0 3 1 0 0 2 0 0 0 8 5 3 0 0 0 0 0 28 2 2884.4679 Q9UQ35;I3L182;I3L4D8;I3L1I8 Q9UQ35 346 373 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 4 0.0019435 49.662 By MS/MS By matching 1 1 21188000 12195000 8993300 5110 2877 5692 12802;12803 11709 11709 5967;5968 1 SAVGHEYQSK VEQDRMDKSAVGHEYQ VGHEYQSKLSKHCSQV K S A S K L 1 0 0 0 0 1 1 1 1 0 0 1 0 0 0 2 0 0 1 1 0 0 10 0 1104.52 Q14247 Q14247 98 107 CTTN Src substrate cortactin yes yes 2 0.011994 63.426 By MS/MS 1 2862300 2862300 0 5111 1945 5693 12804 11710 11710 7703 1 SAVKNEEYFMFPEPK KENVYTPKSAVKNEEY YFMFPEPKTPVNKNQH K S A P K T 1 0 1 0 0 0 3 0 0 0 0 2 1 2 2 1 0 0 1 1 0 0 15 1 1814.8549 Q14680 Q14680 431 445 MELK Maternal embryonic leucine zipper kinase yes yes 2 0.016994 55.04 By MS/MS By matching 1 1 4266100 2348200 1917900 5112 1954 5694 12805;12806 11711 11711 7708 1 SAVLLVDETATTPIFANRR SQPKERPRSAVLLVDE TPIFANRRSQQSVSLS R S A R R S 3 2 1 1 0 0 1 0 0 1 2 0 0 1 1 1 3 0 0 2 0 0 19 1 2073.1219 Q12802;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73 Q12802 1876 1894 AKAP13 A-kinase anchor protein 13 yes no 3 0.00099835 65.25 By MS/MS By MS/MS 1 1 5531000 4373500 1157500 5113 1877 5695 12807;12808 11712;11713;11714 11712 3561 3 SAVQKPPSTGSAPAIESVD EAEPKSQRSAVQKPPS APAIESVD________ R S A V D - 3 0 0 1 0 1 1 1 0 1 0 1 0 0 3 4 1 0 0 2 0 0 19 1 1839.9214 Q9NUQ3 Q9NUQ3 510 528 TXLNG Gamma-taxilin yes yes 2 0.00096988 74.147 By matching By MS/MS 1 1 20163000 10665000 9498400 5114 2736 5696 12809;12810 11715 11715 5601;7070 1 SAVRPASLNLNR VHYATMARSAVRPASL PASLNLNRSRSLSNSN R S A N R S 2 2 2 0 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 12 1 1296.7262 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 882 893 DOCK7 Dedicator of cytokinesis protein 7 yes no 2;3 0.00098719 101.45 By MS/MS By MS/MS 2 1 71020000 62660000 8360900 5115 2519 5697 12811;12812;12813 11716;11717;11718 11717 5085 3 SAVSPDLHITPIYEGR SQLGQDLRSAVSPDLH ITPIYEGRTYYSPVYR R S A G R T 1 1 0 1 0 0 1 1 1 2 1 0 0 0 2 2 1 0 1 1 0 0 16 0 1753.8999 A0A0D9SF60;Q99569 Q99569 403 418 PKP4 Plakophilin-4 no no 3 0.0069322 53.169 By MS/MS 1 1062800 1062800 0 5116 314;2552 5698 12814 11719 11719 569;7233 1 SAYQTIDSAEAPADPFAVPEGR FLGSSQDRSAYQTIDS PFAVPEGRSQDARGY_ R S A G R S 5 1 0 2 0 1 2 1 0 1 0 0 0 1 3 2 1 0 1 1 0 0 22 0 2291.0706 Q6RW13 Q6RW13 131 152 AGTRAP Type-1 angiotensin II receptor-associated protein yes yes 2;3 3.6491E-14 114.06 By MS/MS By MS/MS 2 2 35137000 20240000 14896000 5117 2166 5699 12815;12816;12817;12818 11720;11721;11722;11723 11721 7758 4 SCAAIIAYLMHSNEQTLQR FSTQGISRSCAAIIAY SNEQTLQRSWAYVKKC R S C Q R S 3 1 1 0 1 2 1 0 1 2 2 0 1 0 0 2 1 0 1 0 0 0 19 0 2205.0671 Q9Y6J8 Q9Y6J8 253 271 STYXL1 Serine/threonine/tyrosine-interacting-like protein 1 yes yes 3 0.02543 41.912 By matching By MS/MS 1 1 4847500 1985200 2862300 5118 2949 5700 12819;12820 11724 11724 7963 0 SCAHDWVYE PEELVDYKSCAHDWVY CAHDWVYE________ K S C Y E - 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 1 0 1 1 1 0 0 9 0 1165.4499 Q32Q12;O60361;P22392 Q32Q12 284 292 NME1-NME2;NME2P1;NME2 Nucleoside diphosphate kinase;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 2 0.010792 82.671 By MS/MS By MS/MS 1 1 5603300 2960300 2643000 5119 1409 5701 12821;12822 11725;11726 11725 2 SCDELSPVSPTQGGYPSEPTR PLKPAYERSCDELSPV GYPSEPTRSRTTPFMG R S C T R S 0 1 0 1 1 1 2 2 0 0 1 0 0 0 4 4 2 0 1 1 0 0 21 0 2263.0063 A0A087WUE1;Q9HCD6 A0A087WUE1 929 949 TANC2 Protein TANC2 yes no 2 0.0074664 55.656 By MS/MS By matching 1 1 7858400 4265300 3593200 5120 45 5702 12823;12824 11727 11727 75 1 SCDEPLTPPPHSPTSMLQLIHDPVSPR AKVLRPLRSCDEPLTP IHDPVSPRGMVTRSSP R S C P R G 0 1 0 2 1 1 1 0 2 1 3 0 1 0 7 4 2 0 0 1 0 0 27 0 3007.4532 I3VM54;Q9Y2K7 I3VM54 690 716 KDM2A Lysine-specific demethylase 2A yes no 3;4 0.011501 47.745 By MS/MS By matching 2 2 60893000 42399000 18493000 5121 1216 5703;5704 12825;12826;12827;12828 11728;11729 11728 2204;2205 1 SCFESSPDPELK QSVTPQRRSCFESSPD SSPDPELKSRTPSRHS R S C L K S 0 0 0 1 1 0 2 0 0 0 1 1 0 1 2 3 0 0 0 0 0 0 12 0 1394.6024 Q9UQ35;I3L182;I3L4D8 Q9UQ35 871 882 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 1.8535E-77 210.93 By MS/MS By MS/MS 2 2 269930000 167150000 102780000 5122 2877 5705;5706 12829;12830;12831;12832 11730;11731;11732;11733 11730 5969;5970 4 SCFESSPDPELKSR QSVTPQRRSCFESSPD PDPELKSRTPSRHSCS R S C S R T 0 1 0 1 1 0 2 0 0 0 1 1 0 1 2 4 0 0 0 0 0 0 14 1 1637.7355 Q9UQ35;I3L182;I3L4D8 Q9UQ35 871 884 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 1.5788E-12 136.33 By MS/MS By MS/MS 2 2 35200000 15511000 19689000 5123 2877 5707 12833;12834;12835;12836 11734;11735;11736 11736 5969;5970 3 SCFQQNNNK SNIEPSVRSCFQQNNN CFQQNNNKPEISVKEF R S C N K P 0 0 3 0 1 2 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 9 0 1138.4826 P46939;H0Y337;Q5T097 P46939 3022 3030 UTRN Utrophin no no 1 NaN 0 0 0 5124 1714 0 SCFSWSGGLGDFSR PPTLGTLRSCFSWSGG GGLGDFSRTPSPSPST R S C S R T 0 1 0 1 1 0 0 3 0 0 1 0 0 2 0 4 0 1 0 0 0 0 14 0 1561.662 Q9UQ84;H0YAZ2 Q9UQ84 607 620 EXO1 Exonuclease 1 yes no 2 7.4475E-05 97.797 By MS/MS By MS/MS 1 1 11992000 7986900 4004800 5125 2879 5708 12837;12838 11737;11738 11737 6009 1 SCNCLLLK IAKAVNEKSCNCLLLK SCNCLLLKVNQIGSVT K S C L K V 0 0 1 0 2 0 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 8 0 1006.494 P06733 P06733 336 343 ENO1 Alpha-enolase yes yes 2 0.0090012 113.26 By MS/MS By MS/MS 1 1 5468100 2978500 2489600 5126 1532 5709 12839;12840 11739;11740 11739 2 SCSIDRSPGAGSLGSPASQR ARQKPVLRSCSIDRSP LGSPASQRKDLGRSES R S C Q R K 2 2 0 1 1 1 0 3 0 1 1 0 0 0 2 6 0 0 0 0 0 0 20 1 1988.9334 E9PC47;P53667 E9PC47 326 345 LIMK1 LIM domain kinase 1 yes no 3 0.0063601 52.158 By MS/MS By MS/MS 1 1 12383000 6998800 5384600 5127 760 5710 12841;12842 11741;11742 11741 1385 2 SCSLVLEHQPDNIK DHYRAALRSCSLVLEH EHQPDNIKALFRKGKV R S C I K A 0 0 1 1 1 1 1 0 1 1 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1638.8036 U3KQI1;U3KQ64;A0A0A0MTJ1;Q14318 U3KQI1 15 28 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes no 2 0.0032843 74.678 By MS/MS By MS/MS 1 1 6423200 3730100 2693100 5128 248 5711 12843;12844 11743;11744 11744 451 2 SCTPSPDQISHR SASASAERSCTPSPDQ SPDQISHRASLEDAPV R S C H R A 0 1 0 1 1 1 0 0 1 1 0 0 0 0 2 3 1 0 0 0 0 0 12 0 1383.6201 C9J6P4;Q7Z2W4 C9J6P4 271 282 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0016517 93.649 By MS/MS 1 6811800 6811800 0 5129 565 5712 12845 11745 11745 1041;1042 1 SCTPSPDQISHRASLEDAPVDDLTR SASASAERSCTPSPDQ APVDDLTRKFTYLGSQ R S C T R K 2 2 0 4 1 1 1 0 1 1 2 0 0 0 3 4 2 0 0 1 0 0 25 1 2766.2879 C9J6P4;Q7Z2W4 C9J6P4 271 295 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 3 0.016459 42.813 By matching By MS/MS 1 1 14695000 8850100 5844700 5130 565 5713 12846;12847 11746 11746 1037;1041;1042 1 SCWRRLVQVFQSK DAVPRSGRSCWRRLVQ LVQVFQSKQFRSAKLE R S C S K Q 0 2 0 0 1 2 0 0 0 0 1 1 0 1 0 2 0 1 0 2 0 0 13 2 1692.8882 O43306 O43306 117 129 ADCY6 Adenylate cyclase type 6 yes yes 2 0.027079 50.292 By MS/MS By matching 1 1 22688000 9489500 13198000 5131 1378 5714 12848;12849 11747 11747 1 SDAEEDGGTVSQEEEDRKPK EKLEEKQKSDAEEDGG EEEDRKPKAEEDEILN K S D P K A 1 1 0 3 0 1 5 2 0 0 0 2 0 0 1 2 1 0 0 1 0 0 20 2 2204.9669 P27824 P27824 554 573 CANX Calnexin yes yes 3 0.020492 47.223 By matching By MS/MS 1 1 19810000 7549500 12261000 5132 1638 5715 12850;12851 11748 11748 3026;3027 1 SDAGLESDTAMK ________________ LESDTAMKKGETLRKQ R S D M K K 2 0 0 2 0 0 1 1 0 0 1 1 1 0 0 2 1 0 0 0 0 0 12 0 1223.534 Q9NR30 Q9NR30 7 18 DDX21 Nucleolar RNA helicase 2 yes yes 2 3.7638E-27 175.21 By MS/MS By MS/MS 1 1 11382000 6965400 4417000 5133 2716 5716 12852;12853 11749;11750 11749 5547 2 SDGSLEDGDDVHR LIEDGGARSDGSLEDG EDGDDVHRAVDNERDG R S D H R A 0 1 0 4 0 0 1 2 1 0 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1400.5804 Q9NRX5 Q9NRX5 361 373 SERINC1 Serine incorporator 1 yes yes 2 0.0019052 89.231 By matching By MS/MS 1 1 6868900 2579800 4289100 5134 2724 5717 12854;12855 11751 11751 5565 1 SDILKDPPSEANSIQSANATTK TNKKTKPKSDILKDPP QSANATTKTSETNHTS K S D T K T 3 0 2 2 0 1 1 0 0 2 1 2 0 0 2 4 2 0 0 0 0 0 22 1 2286.1339 Q8N488 Q8N488 115 136 RYBP RING1 and YY1-binding protein yes yes 3 0.00010399 74.364 By MS/MS By MS/MS 1 1 6208000 3073900 3134000 5135 2310 5718 12856;12857 11752;11753 11753 4641 2 SDISPLTPR EGEKLSPKSDISPLTP DISPLTPRESSPLYSP K S D P R E 0 1 0 1 0 0 0 0 0 1 1 0 0 0 2 2 1 0 0 0 0 0 9 0 984.52401 P46821 P46821 1782 1790 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.017607 102.53 By MS/MS By MS/MS 1 1 11516000 5448400 6067500 5136 1712 5719 12858;12859 11754;11755 11755 2 SDKSPDLAPTPAPQSTPR KAAKQEARSDKSPDLA PAPQSTPRNTVSQSIS R S D P R N 2 1 0 2 0 1 0 0 0 0 1 1 0 0 5 3 2 0 0 0 0 0 18 1 1863.9327 F8WAE5;Q9BY44 F8WAE5 498 515 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 2;3 5.2724E-13 121.77 By MS/MS By MS/MS 3 2 525460000 270740000 254720000 5137 945 5720;5721 12860;12861;12862;12863;12864 11756;11757;11758;11759 11758 1714 3 SDLLLEGFNNYR SGAGEHLKSDLLLEGF LEGFNNYRFLSNGYIP K S D Y R F 0 1 2 1 0 0 1 1 0 0 3 0 0 1 0 1 0 0 1 0 0 0 12 0 1439.7045 P35580 P35580 297 308 MYH10 Myosin-10 yes yes 2 0.01564 68.626 By MS/MS 1 824670 0 824670 5138 1671 5722 12865 11760 11760 1 SDLNGLPSPVEER PYATIIPRSDLNGLPS LPSPVEERCGDSPNSE R S D E R C 0 1 1 1 0 0 2 1 0 0 2 0 0 0 2 2 0 0 0 1 0 0 13 0 1411.6943 C9JLA7;E7EWN3;Q9C0A6 C9JLA7 65 77 SETD5 SET domain-containing protein 5 yes no 2 0.0047638 94.532 By MS/MS 1 0 0 0 5139 598 5723 12866 11761 11761 1088 1 SDQQGEALDSSQKK MKEPDEEKSDQQGEAL ALDSSQKKTKNKKKKN K S D K K T 1 0 0 2 0 3 1 1 0 0 1 2 0 0 0 3 0 0 0 0 0 0 14 1 1519.7114 Q32MZ4 Q32MZ4 555 568 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 2 0.022544 46.68 By MS/MS 1 0 0 0 5140 2034 5724 12867 11762 11762 1 SDSASSEPVGIYQGFEK VTQRASRRSDSASSEP GIYQGFEKKTGVAGED R S D E K K 1 0 0 1 0 1 2 2 0 1 0 1 0 1 1 4 0 0 1 1 0 0 17 0 1799.8214 Q05655 Q05655 302 318 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2 1.2491E-05 101.39 By MS/MS By MS/MS 3 3 40090000 22525000 17565000 5141 1855 5725;5726 12868;12869;12870;12871;12872;12873 11763;11764;11765;11766;11767 11765 3492;3493;7667 5 SDSASSEPVGIYQGFEKK VTQRASRRSDSASSEP IYQGFEKKTGVAGEDM R S D K K T 1 0 0 1 0 1 2 2 0 1 0 2 0 1 1 4 0 0 1 1 0 0 18 1 1927.9163 Q05655 Q05655 302 319 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2;3 2.7789E-05 82.259 By MS/MS By MS/MS 3 3 24695000 11459000 13236000 5142 1855 5727;5728 12874;12875;12876;12877;12878;12879 11768;11769;11770;11771 11770 3492;3493;7667 4 SDSEATISR RLGSLSARSDSEATIS DSEATISRSSASSRTA R S D S R S 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 3 1 0 0 0 0 0 9 0 964.44615 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1129 1137 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0026907 106.62 By MS/MS By matching 3 1 5429700 3966100 1463600 5143 1006 5729 12880;12881;12882;12883 11772;11773;11774 11774 1840 3 SDSGGSSSEPFDR SGLVPRERSDSGGSSS SSSEPFDRHAPAMLRE R S D D R H 0 1 0 2 0 0 1 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 13 0 1326.5324 P48634 P48634 759 771 PRRC2A Protein PRRC2A yes yes 2 1.1561E-10 142.39 By MS/MS By MS/MS 1 1 21979000 11563000 10416000 5144 1718 5730 12884;12885 11775;11776;11777 11776 3204;3205 3 SDSGGSSSEPFDRHAPAMLR SGLVPRERSDSGGSSS RHAPAMLRERGTPPVD R S D L R E 2 2 0 2 0 0 1 2 1 0 1 0 1 1 2 5 0 0 0 0 0 0 20 1 2102.944 P48634 P48634 759 778 PRRC2A Protein PRRC2A yes yes 3 0.0013906 65.374 By MS/MS By MS/MS 1 1 16237000 7574500 8662500 5145 1718 5731 12886;12887 11778;11779 11778 3204;3205 2 SDSLILDHQWELEK NLAGWRPRSDSLILDH DHQWELEKLSLLQEVE R S D E K L 0 0 0 2 0 1 2 0 1 1 3 1 0 0 0 2 0 1 0 0 0 0 14 0 1711.8417 Q12756;H7C3Y8 Q12756 1368 1381 KIF1A Kinesin-like protein KIF1A yes no 3 0.0012938 77.324 By MS/MS By MS/MS 1 1 3594300 1573700 2020600 5146 1875 5732 12888;12889 11780;11781 11780 3550 2 SDSLLSFR PSEPGLRRSDSLLSFR SDSLLSFRLDLDLGPS R S D F R L 0 1 0 1 0 0 0 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 8 0 923.47125 Q00587 Q00587 190 197 CDC42EP1 Cdc42 effector protein 1 yes yes 2 0.0072089 97.597 By MS/MS By MS/MS 1 1 4764300 2762800 2001500 5147 1825 5733 12890;12891 11782;11783 11783 3417 2 SDSNASFLR QRRKRPKKSDSNASFL DSNASFLRAARAGNLD K S D L R A 1 1 1 1 0 0 0 0 0 0 1 0 0 1 0 3 0 0 0 0 0 0 9 0 995.46722 I6L894;Q01484;D6R9U4;B7Z651;A0A0U1RQN6;D6RHE1;E9PHW9 I6L894 29 37 ANK2 Ankyrin-2 yes no 2 0.005854 83.397 By MS/MS By MS/MS 1 1 8620300 3660700 4959600 5148 1217 5734 12892;12893 11784;11785 11784 2206 2 SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR VGAGALRRSDSPEIPF GNSFVGLRVVAKWSSN R S D L R V 4 1 1 3 0 1 1 4 0 1 2 0 0 2 4 6 0 0 0 1 0 0 31 0 3045.4316 Q12888;A6NNK5 Q12888 1460 1490 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 3.2073E-05 66.294 By MS/MS By MS/MS 1 1 187260000 122860000 64401000 5149 1882 5735 12894;12895 11786;11787 11786 3582;3583 2 SDSQASLTVPLSPQVVR KSTSVLSKSDSQASLT PLSPQVVRSKAVSHRT K S D V R S 1 1 0 1 0 2 0 0 0 0 2 0 0 0 2 4 1 0 0 3 0 0 17 0 1782.9476 Q8TEV9 Q8TEV9 487 503 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein yes yes 2 2.4541E-07 114.96 By MS/MS By MS/MS 1 2 10515000 4319800 6195000 5150 2392 5736 12896;12897;12898 11788;11789;11790 11788 4781;4782 3 SDSRAQAVSEDAGGNEGR GEQARDERSDSRAQAV DAGGNEGRAAEAEPRA R S D G R A 3 2 1 2 0 1 2 3 0 0 0 0 0 0 0 3 0 0 0 1 0 0 18 1 1804.7936 C9JZG1;P55884 C9JZG1 78 95 EIF3B Eukaryotic translation initiation factor 3 subunit B yes no 3 0.016232 71.905 By matching By MS/MS 1 1 14630000 6530000 8099700 5151 623 5737 12899;12900 11791 11791 1127;1128 0 SDSSQPMLLR SPSTSLQRSDSSQPML SSQPMLLRVVGSQTSD R S D L R V 0 1 0 1 0 1 0 0 0 0 2 0 1 0 1 3 0 0 0 0 0 0 10 0 1132.5547 E9PDN5;A0A075B6G3;P11532;A0A087WV90;A0A087WTU7;E7EQR9;F5GZY3;E7EQS5;F8VX32;E7ESB2;H0Y304 E9PDN5 3617 3626 DMD Dystrophin yes no 2 2.5183E-05 133.42 By MS/MS By MS/MS 1 2 23881000 14455000 9426000 5152 6 5738;5739 12901;12902;12903 11792;11793;11794 11792 2 13 3 SDSVLPASHGHLPQAGSLER RSDPGWERSDSVLPAS PQAGSLERNRVGVSSK R S D E R N 2 1 0 1 0 1 1 2 2 0 3 0 0 0 2 4 0 0 0 1 0 0 20 0 2057.029 Q8N4C8 Q8N4C8 747 766 MINK1 Misshapen-like kinase 1 yes yes 3 8.8903E-09 94.837 By matching By MS/MS 1 1 5917700 3660200 2257500 5153 2311 5740 12904;12905 11795 11795 4644 1 SDTSISDFLSEEDDIVPSKK NLFYTAPKSDTSISDF DDIVPSKKISQSTALA K S D K K I 0 0 0 4 0 0 2 0 0 2 1 2 0 1 1 5 1 0 0 1 0 0 20 1 2211.0431 Q4AC94 Q4AC94 457 476 C2CD3 C2 domain-containing protein 3 yes yes 2 0.027695 50.425 By MS/MS 1 1549200 1549200 0 5154 2044 5741 12906 11796 11796 0 SDVFRDSFSHSPGAVSSLK IRDGSLSRSDVFRDSF PGAVSSLKVFTGLAAP R S D L K V 1 1 0 2 0 0 0 1 1 0 1 1 0 2 1 6 0 0 0 2 0 0 19 1 2021.9807 Q9H6R7 Q9H6R7 680 698 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes yes 3 5.1211E-05 79.837 By MS/MS By matching 1 1 11649000 7249200 4399800 5155 2668 5742 12907;12908 11797 11797 5443;5444 1 SDVIHAPLPSPVDK DGMEARLRSDVIHAPL PLPSPVDKVAANTPSM R S D D K V 1 0 0 2 0 0 0 0 1 1 1 1 0 0 3 2 0 0 0 2 0 0 14 0 1473.7827 Q14BN4 Q14BN4 139 152 SLMAP Sarcolemmal membrane-associated protein yes yes 2 0.0021428 92.063 By MS/MS 1 0 0 0 5156 1963 5743 12909 11798 11798 3817 1 SDVLELTDDNFESR ________________ TDDNFESRISDTGSAG - S D S R I 0 1 1 3 0 0 2 0 0 0 2 0 0 1 0 2 1 0 0 1 0 0 14 0 1638.7373 H7BZJ3 H7BZJ3 1 14 PDIA3 yes yes 2 0.0054805 99.539 By MS/MS By matching 1 1 17228000 7445500 9782000 5157 1160 5744 12910;12911 11799 11799 0 SDYLELR FTDHQTQKSDYLELRA KSDYLELRAKLQTKPD K S D L R A 0 1 0 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 1 0 0 0 7 0 894.4447 O94933 O94933 951 957 SLITRK3 SLIT and NTRK-like protein 3 yes yes 2 0.031087 75.189 By MS/MS 1 0 0 0 5158 1469 5745 12912 11800 11800 7536 1 SEACPCQPDSGSPLPAEEEKR KRSIEGRRSEACPCQP LPAEEEKRLSAESGLS R S E K R L 2 1 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 21 1 2343.0107 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5 A0A0G2JMS7 412 432 SCRIB Protein scribble homolog yes no 3 0.011718 43.598 By MS/MS By matching 1 1 6458300 4229000 2229200 5159 322 5746 12913;12914 11801 11801 605 1 SEAPAEVTHFSPK KVAQRIKKSEAPAEVT EVTHFSPKSIPDYDFE K S E P K S 2 0 0 0 0 0 2 0 1 0 0 1 0 1 2 2 1 0 0 1 0 0 13 0 1398.6779 Q6PID6 Q6PID6 187 199 TTC33 Tetratricopeptide repeat protein 33 yes yes 2;3 5.7974E-13 155.06 By MS/MS By MS/MS 2 2 44353000 25500000 18853000 5160 2160 5747 12915;12916;12917;12918 11802;11803;11804;11805 11802 4300 3 SEAPETPMEEEAELVLTEK SGSLRLGKSEAPETPM AELVLTEKSSGTFLSG K S E E K S 2 0 0 0 0 0 7 0 0 0 2 1 1 0 2 1 2 0 0 1 0 0 19 0 2130.9878 Q5JTH9;A0A087X1U8 Q5JTH9 72 90 RRP12 RRP12-like protein yes no 2;3 0.0032008 88.283 By MS/MS By matching 2 1 18662000 11686000 6976000 5161 2077 5748 12919;12920;12921 11806;11807 11807 6872 2 SEAPNWATQDSGFY KKLNQNSRSEAPNWAT ATQDSGFY________ R S E F Y - 2 0 1 1 0 1 1 1 0 0 0 0 0 1 1 2 1 1 1 0 0 0 14 0 1571.6529 P60228;H0YAW4;E5RGA2 P60228 432 445 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 2 1.7385E-08 128.17 By MS/MS By MS/MS 1 1 5894800 3108500 2786300 5162 1782 5749 12922;12923 11808;11809 11809 7653 2 SEDDSAKFDSNEEDSASVFSPSFGLK SFPSYSQKSEDDSAKF FSPSFGLKQTDKVPSK K S E L K Q 2 0 1 4 0 0 3 1 0 0 1 2 0 3 1 7 0 0 0 1 0 0 26 1 2794.2093 Q02880 Q02880 1457 1482 TOP2B DNA topoisomerase 2-beta yes yes 3 8.0314E-18 99.443 By MS/MS By MS/MS 2 2 175780000 88829000 86955000 5163 1842 5750;5751 12924;12925;12926;12927 11810;11811;11812;11813 11812 3446;3447;3454 4 SEDEDSLEEAGSPAPGPCPR PGSAGQPRSEDEDSLE PAPGPCPRSNAMLAVK R S E P R S 2 1 0 2 1 0 4 2 0 0 1 0 0 0 4 3 0 0 0 0 0 0 20 0 2098.8749 Q8TBB5 Q8TBB5 413 432 KLHDC4 Kelch domain-containing protein 4 yes yes 2 4.8143E-08 90.731 By MS/MS By MS/MS 1 1 9847500 4731300 5116200 5164 2372 5752 12928;12929 11814;11815 11815 4749;4750 2 SEDESETEDEEEKSQEDQEQK KEKKRKKRSEDESETE SQEDQEQKRKRRKTRQ R S E Q K R 0 0 0 3 0 3 9 0 0 0 0 2 0 0 0 3 1 0 0 0 0 0 21 1 2526.9842 Q7Z6P5;J3KQ69;P25205 Q7Z6P5 163 183 MCM3 DNA replication licensing factor MCM3 yes no 3 0.014176 61.015 By MS/MS 1 0 0 0 5165 1233 5753 12930 11816 11816 2234 1 SEDESETEDEEEKSQEDQEQKR KEKKRKKRSEDESETE QEDQEQKRKRRKTRQP R S E K R K 0 1 0 3 0 3 9 0 0 0 0 2 0 0 0 3 1 0 0 0 0 0 22 2 2683.0853 Q7Z6P5;J3KQ69;P25205 Q7Z6P5 163 184 MCM3 DNA replication licensing factor MCM3 yes no 3 1.1565E-43 147.03 By MS/MS By MS/MS 1 1 483120000 177130000 305990000 5166 1233 5754 12931;12932 11817;11818 11818 2234 2 SEDMPFSPK EQNPPPARSEDMPFSP EDMPFSPKASVAAMEA R S E P K A 0 0 0 1 0 0 1 0 0 0 0 1 1 1 2 2 0 0 0 0 0 0 9 0 1036.4535 Q12888;A6NNK5;C9JXV0 Q12888 259 267 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 6.3058E-16 177.57 By MS/MS By MS/MS 2 2 33063000 16054000 17009000 5167 1882 5755;5756 12933;12934;12935;12936 11819;11820;11821;11822;11823;11824 11824 3584 6 SEDPPGQEAGSEEEGSSASGLAK GPSSLESKSEDPPGQE SSASGLAKVKELAETI K S E A K V 3 0 0 1 0 1 5 4 0 0 1 1 0 0 2 5 0 0 0 0 0 0 23 0 2217.9509 I3L2B0;K7EIG1;O75153 I3L2B0 692 714 CLUH Clustered mitochondria protein homolog yes no 2 0.0087177 51.073 By MS/MS By MS/MS 1 1 19390000 9686500 9703000 5168 1206 5757 12937;12938 11825;11826 11826 2188;2189 2 SEDSTIYDLLKDPVSLR GSSSLEHRSEDSTIYD LKDPVSLRSKARRAKK R S E L R S 0 1 0 3 0 0 1 0 0 1 3 1 0 0 1 3 1 0 1 1 0 0 17 1 1949.9946 H0YAN8;O15013 H0YAN8 920 936 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes no 2;3 7.3637E-30 158.86 By MS/MS By MS/MS 2 2 36744000 28423000 8320800 5169 1051 5758 12939;12940;12941;12942 11827;11828;11829 11827 7440 3 SEEPSVSIPFLQTALLRSSGSLGHR HGKLLKQKSEEPSVSI SSGSLGHRPSQEMDKM K S E H R P 1 2 0 0 0 1 2 2 1 1 4 0 0 1 2 6 1 0 0 1 0 0 25 1 2667.398 H0Y2V6;Q5SW79;H0YB66 H0Y2V6 410 434 CEP170 Centrosomal protein of 170 kDa yes no 3 0.011737 40.622 By MS/MS By matching 1 1 6701500 4483800 2217700 5170 1006 5759 12943;12944 11830 11830 1841;1842;1848;1849;1850 1 SEESPVYSNSSVR PSDWWVVKSEESPVYS VYSNSSVRNELPMHHN K S E V R N 0 1 1 0 0 0 2 0 0 0 0 0 0 0 1 5 0 0 1 2 0 0 13 0 1439.6529 H0Y8J2;Q03188 H0Y8J2 442 454 CENPC Centromere protein C yes no 2 0.0010365 104.9 By MS/MS By MS/MS 1 1 14448000 8098300 6349700 5171 1041 5760 12945;12946 11831;11832 11832 1931 2 SEGEFKQTSSFLV IYSQPSARSEGEFKQT KQTSSFLV________ R S E L V - 0 0 0 0 0 1 2 1 0 0 1 1 0 2 0 3 1 0 0 1 0 0 13 1 1457.7038 A0A087WY82;Q9Y624 A0A087WY82 267 279 F11R Junctional adhesion molecule A yes no 2 0.0017115 100.93 By MS/MS By MS/MS 1 1 5209900 2528600 2681300 5172 96 5761 12947;12948 11833;11834 11833 179;180 2 SEGEGEAASADDGSLNTSGAGPK AQASVGSRSEGEGEAA NTSGAGPKSWQVPPPA R S E P K S 4 0 1 2 0 0 3 5 0 0 1 1 0 0 1 4 1 0 0 0 0 0 23 0 2105.8985 M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;M0R2I2;J3KQS6;Q9NWV8 M0QXG9 49 71 BABAM1 BRISC and BRCA1-A complex member 1 yes no 2 3.9386E-06 83.359 By MS/MS By MS/MS 1 1 15255000 8492000 6762700 5173 1236 5762 12949;12950 11835;11836 11835 2240;2241 2 SEGFSMDR KVERTRKRSEGFSMDR SEGFSMDRKVEKKKEP R S E D R K 0 1 0 1 0 0 1 1 0 0 0 0 1 1 0 2 0 0 0 0 0 0 8 0 927.37563 Q7Z4V5;K7ERA4 Q7Z4V5 454 461 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 2 0.0074835 96.143 By MS/MS By MS/MS 1 1 12455000 6995200 5460000 5174 2218 5763 12951;12952 11837;11838 11838 4436 2 SEIYGLVQR KSSSEESRSEIYGLVQ EIYGLVQRCVIIQKDD R S E Q R C 0 1 0 0 0 1 1 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1063.5662 Q9NZN5 Q9NZN5 63 71 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 2 0.0017605 93.195 By MS/MS By MS/MS 1 1 3677900 1954200 1723700 5175 2770 5764 12953;12954 11839;11840 11840 7920 2 SELDTEKVPLSPLPGPK AKRKQLLRSELDTEKV LSPLPGPKQTPPLKGC R S E P K Q 0 0 0 1 0 0 2 1 0 0 3 2 0 0 4 2 1 0 0 1 0 0 17 1 1805.9775 Q8NHU6 Q8NHU6 309 325 TDRD7 Tudor domain-containing protein 7 yes yes 3 3.9006E-05 84.493 By MS/MS By MS/MS 1 1 5214600 2806600 2408000 5176 2361 5765 12955;12956 11841;11842 11842 4736 2 SELGNQSPSTSSR MQNDSILKSELGNQSP QSPSTSSRQVTGQPQN K S E S R Q 0 1 1 0 0 1 1 1 0 0 1 0 0 0 1 5 1 0 0 0 0 0 13 0 1348.6219 A0A0A0MSK5;J3KN66;Q5JTV8;H0YD16 A0A0A0MSK5 188 200 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 2 1.1685E-07 127.3 By MS/MS By MS/MS 1 2 12957000 5916200 7040700 5177 218 5766 12957;12958;12959 11843;11844 11843 398;399 2 SELSPVAR RGAKPSVKSELSPVAR SELSPVARQTSQIGGS K S E A R Q 1 1 0 0 0 0 1 0 0 0 1 0 0 0 1 2 0 0 0 1 0 0 8 0 857.46068 P25054 P25054 2280 2287 APC Adenomatous polyposis coli protein yes yes 2 0.02156 70.908 By matching By MS/MS 1 1 6033400 3482200 2551200 5178 1628 5767 12960;12961 11845 11845 1 SELSQDAEPAGSQETK ERRSLRKRSELSQDAE PAGSQETKDSGSQEVL R S E T K D 2 0 0 1 0 2 3 1 0 0 1 1 0 0 1 3 1 0 0 0 0 0 16 0 1675.7537 Q9BVJ6;X6RJY0 Q9BVJ6 434 449 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 0.0025784 69.03 By MS/MS By MS/MS 2 2 19721000 11428000 8292500 5179 2586 5768 12962;12963;12964;12965 11846;11847;11848;11849 11847 5230;5231;7028 4 SENEDIYYK EDLSPSRRSENEDIYY ENEDIYYKSMPNLGAG R S E Y K S 0 0 1 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 2 0 0 0 9 0 1159.5033 H0Y3V3;H0Y5C0;B1ALU1;B1ALU3;O95490 H0Y3V3 412 420 ADGRL2;LPHN2 Latrophilin-2 yes no 2 0.0015131 113.26 By MS/MS By MS/MS 1 1 4185100 1688500 2496600 5180 463 5769 12966;12967 11850;11851 11851 7280;7281 2 SEPHSPGIPEIFR SSSSKGIKSEPHSPGI PGIPEIFRTASQRCRD K S E F R T 0 1 0 0 0 0 2 1 1 2 0 0 0 1 3 2 0 0 0 0 0 0 13 0 1464.7361 Q9UJJ2;Q8ND82 Q9UJJ2 76 88 ZNF280C Zinc finger protein 280C yes no 2;3 1.0055E-12 153.14 By MS/MS By MS/MS 2 2 47527000 25447000 22081000 5181 2343 5770 12968;12969;12970;12971 11852;11853;11854;11855;11856 11855 4696 5 SEPRPPISSPR PEAEPESKSEPRPPIS RPPISSPRAPQTRAVK K S E P R A 0 2 0 0 0 0 1 0 0 1 0 0 0 0 4 3 0 0 0 0 0 0 11 1 1221.6466 Q6WKZ4;E7EX40 Q6WKZ4 521 531 RAB11FIP1 Rab11 family-interacting protein 1 no no 3 0.0094255 63.966 By MS/MS 1 0 0 0 5182 2175;752 5771 12972 11857 11857 1375 1 SEPSLEPESFRSPTFGK SSRHPSYRSEPSLEPE FRSPTFGKSFHFDPLS R S E G K S 0 1 0 0 0 0 3 1 0 0 1 1 0 2 3 4 1 0 0 0 0 0 17 1 1893.9109 Q9C0B5;H0YEF4 Q9C0B5 398 414 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase yes no 2;3 0.0038012 58.885 By MS/MS By MS/MS 2 2 13653000 6683400 6969200 5183 2614 5772 12973;12974;12975;12976 11858;11859;11860 11858 5289;5290 3 SESAPTLHPYSPLSPK GADTPFGRSESAPTLH PYSPLSPKGRPSSPRT R S E P K G 1 0 0 0 0 0 1 0 1 0 2 1 0 0 4 4 1 0 1 0 0 0 16 0 1709.8625 Q8WUF5;K7EN03 Q8WUF5 100 115 PPP1R13L RelA-associated inhibitor yes no 3 0.00047031 78.661 By MS/MS 1 3889800 3889800 0 5184 2400 5773 12977 11861 11861 4801 1 SESELIDELSEDFDR PEEKPKPRSESELIDE ELSEDFDRSECKEKPS R S E D R S 0 1 0 3 0 0 4 0 0 1 2 0 0 1 0 3 0 0 0 0 0 0 15 0 1782.7796 E9PDE4;E7ES10;E7EVY3;B7Z574;A0A0C4DGB5;P20810;D6RC54;E7EQ12;A0A0A0MR45;E7EQA0;H0Y7F0;H0YD33;H0Y9H6;E9PCH5 E9PDE4 292 306 CAST Calpastatin no no 2 5.4961E-05 110.55 By MS/MS 1 3826300 3826300 0 5185 288;763 5774 12978 11862 11862 514 1 SESENWR GRKHEFIRSESENWRI RSESENWRIFREEQNG R S E W R I 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 7 0 906.38316 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1;C9JH78;C9IYH5 I1E4Y6 221 227 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 0.0037488 120.87 By MS/MS By MS/MS 2 2 27572000 12965000 14607000 5186 1194 5775 12979;12980;12981;12982 11863;11864;11865;11866;11867 11864 2170 5 SESGYGFNVR PRVVRIVKSESGYGFN SGYGFNVRGQVSEGGQ K S E V R G 0 1 1 0 0 0 1 2 0 0 0 0 0 1 0 2 0 0 1 1 0 0 10 0 1114.5043 Q96L92;H7C603 Q96L92 49 58 SNX27 Sorting nexin-27 yes no 2 1.8777E-05 143.4 By MS/MS By MS/MS 1 1 12943000 7761000 5182000 5187 2515 5776 12983;12984 11868;11869 11868 5078 2 SESLDPDSSMDTTLILK SASRIRERSESLDPDS MDTTLILKDTEAVMAF R S E L K D 0 0 0 3 0 0 1 0 0 1 3 1 1 0 1 4 2 0 0 0 0 0 17 0 1850.8819 H0Y2V6;Q5SW79 H0Y2V6 843 859 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0021798 69.261 By MS/MS 1 5008300 5008300 0 5188 1006 5777 12985 11870 11870 118 1835 1 SESLELPQAAPPQIYHEK PWKGDKAKSESLELPQ PPQIYHEKQRRELCAL K S E E K Q 2 0 0 0 0 2 3 0 1 1 2 1 0 0 3 2 0 0 1 0 0 0 18 0 2036.0215 B0QY58;B0QY55;B0QY57;B0QY56;H0YGT9;Q15040 B0QY58 13 30 JOSD1 Josephin-1 yes no 3 0.0093742 50.252 By matching By MS/MS 1 1 4359800 1973300 2386500 5189 445 5778 12986;12987 11871 11871 873;874 1 SESLESPR TLPRGLFRSESLESPR SESLESPRGERLLQDA R S E P R G 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 3 0 0 0 0 0 0 8 0 903.42977 V9GYM8;Q92974;Q5VY93 V9GYM8 688 695 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.014542 81.338 By MS/MS By MS/MS 2 1 5943500 5943500 0 5190 2450 5779 12988;12989;12990 11872;11873;11874 11873 4937 3 SESLIDASEDSQLEAAIR SPPKKCARSESLIDAS SQLEAAIRASLQETHF R S E I R A 3 1 0 2 0 1 3 0 0 2 2 0 0 0 0 4 0 0 0 0 0 0 18 0 1932.9276 C9JAT7;O94888 C9JAT7 116 133 UBXN7 UBX domain-containing protein 7 yes no 2;3 2.4775E-38 160.15 By MS/MS By MS/MS 4 3 67687000 47303000 20384000 5191 580 5780;5781 12991;12992;12993;12994;12995;12996;12997 11875;11876;11877;11878;11879;11880 11877 1058;1059;1060 6 SESLTAESR EGGGLMTRSESLTAES ESLTAESRLVHTSPNY R S E S R L 1 1 0 0 0 0 2 0 0 0 1 0 0 0 0 3 1 0 0 0 0 0 9 0 978.4618 Q15751;H0YNB1 Q15751 1489 1497 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes no 2 0.0080587 77.288 By MS/MS By MS/MS 1 1 2666300 993980 1672300 5192 2008 5782 12998;12999 11881;11882 11882 3917 2 SESMPVQLNK QQQQRLMKSESMPVQL SMPVQLNKGLSSKNIS K S E N K G 0 0 1 0 0 1 1 0 0 0 1 1 1 0 1 2 0 0 0 1 0 0 10 0 1131.5594 Q92609;C9J3F6 Q92609 520 529 TBC1D5 TBC1 domain family member 5 yes no 2 0.0029484 84.687 By MS/MS By matching 1 1 21588000 13216000 8372400 5193 2427 5783 13000;13001 11883 11883 4878 1 SESPDLILHDSGVSAAR ASNLETPRSESPDLIL DSGVSAARAAAAAAAA R S E A R A 2 1 0 2 0 0 1 1 1 1 2 0 0 0 1 4 0 0 0 1 0 0 17 0 1752.8642 P0CG40 P0CG40 438 454 SP9 Transcription factor Sp9 yes yes 3 0.00068552 72.793 By matching By MS/MS 1 1 6512800 1988600 4524200 5194 1552 5784 13002;13003 11884 11884 2853 1 SESPKEPEQLR ________________ PKEPEQLRKLFIGGLS K S E L R K 0 1 0 0 0 1 3 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 11 1 1298.6466 F8W6I7;P09651;F8VTQ5;F8W646 F8W6I7 4 14 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 2;3 2.7076E-06 133.04 By MS/MS By MS/MS 2 2 582220000 229530000 352690000 5195 933 5785 13004;13005;13006;13007 11885;11886;11887;11888 11885 1674 4 SESPKEPEQLRK ________________ KEPEQLRKLFIGGLSF K S E R K L 0 1 0 0 0 1 3 0 0 0 1 2 0 0 2 2 0 0 0 0 0 0 12 2 1426.7416 F8W6I7;P09651;F8VTQ5;F8W646 F8W6I7 4 15 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 3 0.0010152 96.707 By MS/MS By MS/MS 1 1 140870000 57955000 82915000 5196 933 5786 13008;13009 11889;11890 11889 1674 2 SESPPAELPSLR LRKSTKKRSESPPAEL PAELPSLRRSTRQKTT R S E L R R 1 1 0 0 0 0 2 0 0 0 2 0 0 0 3 3 0 0 0 0 0 0 12 0 1281.6565 Q14669;G5E9G6;H7C1L9 Q14669 310 321 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 7.591E-05 117.03 By MS/MS By MS/MS 1 2 43801000 25185000 18616000 5197 1949 5787 13010;13011;13012 11891;11892;11893;11894 11891 3762;3763 4 SESPPAELPSLRR LRKSTKKRSESPPAEL AELPSLRRSTRQKTTG R S E R R S 1 2 0 0 0 0 2 0 0 0 2 0 0 0 3 3 0 0 0 0 0 0 13 1 1437.7576 Q14669;G5E9G6;H7C1L9 Q14669 310 322 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 3 0.00058839 87.667 By MS/MS By MS/MS 1 1 10836000 6570700 4265300 5198 1949 5788 13013;13014 11895;11896;11897 11896 3762;3763 3 SESPPPLSDPK TSAITASRSESPPPLS PPPLSDPKQAKVVARR R S E P K Q 0 0 0 1 0 0 1 0 0 0 1 1 0 0 4 3 0 0 0 0 0 0 11 0 1152.5663 Q15059 Q15059 261 271 BRD3 Bromodomain-containing protein 3 yes yes 2 5.3607E-06 142.76 By MS/MS By MS/MS 1 1 94119000 48356000 45763000 5199 1975 5789 13015;13016 11898;11899;11900;11901;11902;11903;11904 11904 3847;3848 7 SESPPPLSDPKQAK TSAITASRSESPPPLS LSDPKQAKVVARRESG R S E A K V 1 0 0 1 0 1 1 0 0 0 1 2 0 0 4 3 0 0 0 0 0 0 14 1 1479.7569 Q15059 Q15059 261 274 BRD3 Bromodomain-containing protein 3 yes yes 2 0.0060172 68.033 By MS/MS By MS/MS 1 1 10690000 4884000 5806400 5200 1975 5790 13017;13018 11905;11906;11907 11906 3847;3848 3 SESPQEALLLPR CFSEKRARSESPQEAL QEALLLPRELGPSMAP R S E P R E 1 1 0 0 0 1 2 0 0 0 3 0 0 0 2 2 0 0 0 0 0 0 12 0 1338.7143 I7G285;H7BY14;A0A087WYU3;Q96NU1 I7G285 169 180 SAMD11 Sterile alpha motif domain-containing protein 11 yes no 2 0.0047252 75.589 By matching By MS/MS 1 1 3320700 1850900 1469800 5201 99 5791 13019;13020 11908 11908 185 1 SESSDFEVVPK QREESETRSESSDFEV SDFEVVPKRRRQRGSE R S E P K R 0 0 0 1 0 0 2 0 0 0 0 1 0 1 1 3 0 0 0 2 0 0 11 0 1222.5717 E7EPN9;Q9Y520 E7EPN9 1248 1258 PRRC2C Protein PRRC2C yes no 2 0.0032707 84.821 By matching By MS/MS 1 1 4742900 2938400 1804500 5202 715 5792 13021;13022 11909 11909 1270 1 SESSGILPNTTDMR QTHPPCRRSESSGILP LPNTTDMRLRPGTRRD R S E M R L 0 1 1 1 0 0 1 1 0 1 1 0 1 0 1 3 2 0 0 0 0 0 14 0 1506.6984 Q92667;I3L2A2;I3L2N7;I3L0K6 Q92667 105 118 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 8.5584E-08 126.09 By MS/MS By MS/MS 2 2 33274000 19036000 14238000 5203 2431 5793;5794 13023;13024;13025;13026 11910;11911;11912 11911 323 4890;4891;4892 3 SESVEGFLSPSR HSGKRTPRSESVEGFL EGFLSPSRCGSRNGEK R S E S R C 0 1 0 0 0 0 2 1 0 0 1 0 0 1 1 4 0 0 0 1 0 0 12 0 1293.6201 Q08AD1 Q08AD1 1311 1322 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 8.2785E-20 169.58 By MS/MS By MS/MS 2 2 16422000 8338500 8083000 5204 1868 5795 13027;13028;13029;13030 11913;11914;11915;11916 11913 3519;3520 4 SESVVSGLDSPAK KALGILGRSESVVSGL SGLDSPAKTSSMEKKL R S E A K T 1 0 0 1 0 0 1 1 0 0 1 1 0 0 1 4 0 0 0 2 0 0 13 0 1274.6354 H7BYJ3;O14578 H7BYJ3 59 71 CIT Citron Rho-interacting kinase yes no 2 2.0213E-21 169.4 By MS/MS By MS/MS 1 1 10217000 4809800 5407400 5205 1153 5796 13031;13032 11917;11918 11918 2096 2 SESVVYADIR HHSDKINKSESVVYAD SVVYADIRKN______ K S E I R K 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 2 0 0 1 2 0 0 10 0 1137.5666 O95297 O95297 258 267 MPZL1 Myelin protein zero-like protein 1 yes yes 2 1.688E-05 122.96 By MS/MS By MS/MS 1 1 73674000 42812000 30861000 5206 1485 5797 13033;13034 11919;11920 11919 7542 2 SETAPAAPAAPAPAEKTPVK ________________ PAEKTPVKKKARKSAG M S E V K K 7 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 2 0 0 1 0 0 20 1 1903.0051 P10412 P10412 2 21 HIST1H1E Histone H1.4 yes yes 2;3 6.7777E-26 135.33 By MS/MS By MS/MS 2 3 64309000 33167000 31141000 5207 1556 5798 13035;13036;13037;13038;13039 11921;11922;11923;11924;11925 11921 6666 4 SETAPAAPAAPAPAEKTPVKK ________________ AEKTPVKKKARKSAGA M S E K K K 7 0 0 0 0 0 2 0 0 0 0 3 0 0 5 1 2 0 0 1 0 0 21 2 2031.1001 P10412 P10412 2 22 HIST1H1E Histone H1.4 yes yes 3 6.7484E-10 109.68 By MS/MS By MS/MS 1 1 21812000 11078000 10734000 5208 1556 5799 13040;13041 11926;11927 11927 6666 2 SETSTSDNTETYQENTSSSGHPTFK ________________ SSGHPTFKCPLCQESN - S E F K C 0 0 2 1 0 1 3 1 1 0 0 1 0 1 1 6 6 0 1 0 0 0 25 0 2734.1478 J3QLQ3;Q8WVD3 J3QLQ3 1 25 RNF138 E3 ubiquitin-protein ligase RNF138 yes no 3 0.016244 42.746 By MS/MS 1 4177300 0 4177300 5209 1251 5800 13042 11928 11928 2265;2266 1 SETSWESPK SVPPSQTKSETSWESP ETSWESPKQIKKKKKA K S E P K Q 0 0 0 0 0 0 2 0 0 0 0 1 0 0 1 3 1 1 0 0 0 0 9 0 1049.4666 E5RJU9;Q86UE4 E5RJU9 506 514 MTDH Protein LYRIC yes no 2 0.0032264 92.611 By MS/MS By MS/MS 1 1 8788600 4090500 4698100 5210 701 5801 13043;13044 11929;11930 11930 1241 2 SEVQQPVHPKPLSPDSR DSRDSQVKSEVQQPVH KPLSPDSRASSLSESS K S E S R A 0 1 0 1 0 2 1 0 1 0 1 1 0 0 4 3 0 0 0 2 0 0 17 1 1899.9803 F8VS07;F8VQE1;Q9UHB6;F8VRN8 F8VS07 48 64 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0012998 67.846 By MS/MS By MS/MS 1 1 49504000 23653000 25851000 5211 911 5802 13045;13046 11931;11932 11931 1637 2 SEWLDPSQKSPLHVGETR QDNSSNGKSEWLDPSQ PLHVGETRKEDDPNED K S E T R K 0 1 0 1 0 1 2 1 1 0 2 1 0 0 2 3 1 1 0 1 0 0 18 1 2065.0229 O15164 O15164 802 819 TRIM24 Transcription intermediary factor 1-alpha yes yes 3 0.0025756 62.325 By MS/MS By MS/MS 1 1 22751000 12953000 9797500 5212 1362 5803 13047;13048 11933;11934 11933 2490 2 SFADIGKK TSRIPLVRSFADIGKK SFADIGKKHSDPHLLE R S F K K H 1 0 0 1 0 0 0 1 0 1 0 2 0 1 0 1 0 0 0 0 0 0 8 1 864.47052 C9JRP1;Q9Y6M7;F8WDX9;E7EW28;C9J240;Q6U841 C9JRP1 233 240 SLC4A7;SLC4A10 Anion exchange protein;Sodium bicarbonate cotransporter 3;Sodium-driven chloride bicarbonate exchanger yes no 2 0.022075 89.029 By matching By MS/MS 1 1 22359000 10484000 11874000 5213 606 5804 13049;13050 11935 11935 1 SFDDPIVQTER GFKKLHGRSFDDPIVQ DPIVQTERIRLPYELQ R S F E R I 0 1 0 2 0 1 1 0 0 1 0 0 0 1 1 1 1 0 0 1 0 0 11 0 1305.6201 D6RJ96;E9PDE8;O95757 D6RJ96 74 84 HSPA4L Heat shock 70 kDa protein 4L yes no 2 0.0094508 70.54 By MS/MS By matching 1 1 2918800 1618800 1300000 5214 686 5805 13051;13052 11936;11937 11937 1211 2 SFDEVEGVFGR GECGFYQRSFDEVEGV EVEGVFGRGGGREMHR R S F G R G 0 1 0 1 0 0 2 2 0 0 0 0 0 2 0 1 0 0 0 2 0 0 11 0 1240.5724 I1E4Y6;Q6Y7W6;E7ESB6;C9JW88 I1E4Y6 139 149 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 1.7683E-06 147.62 By MS/MS By MS/MS 1 1 9375300 4136500 5238800 5215 1194 5806 13053;13054 11938;11939;11940 11939 2171 3 SFDHLISDTK KKLLGTRKSFDHLISD DHLISDTKAPKRQEME K S F T K A 0 0 0 2 0 0 0 0 1 1 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1161.5666 J3QSG6;H0Y465;P21359 J3QSG6 338 347 NF1 Neurofibromin;Neurofibromin truncated yes no 2 1.3303E-13 166.29 By MS/MS By MS/MS 1 1 57163000 30254000 26910000 5216 1016 5807 13055;13056 11941;11942 11942 1881 2 SFDHLISDTKAPK KKLLGTRKSFDHLISD ISDTKAPKRQEMESGI K S F P K R 1 0 0 2 0 0 0 0 1 1 1 2 0 1 1 2 1 0 0 0 0 0 13 1 1457.7514 J3QSG6;H0Y465;P21359 J3QSG6 338 350 NF1 Neurofibromin;Neurofibromin truncated yes no 3 1.0959E-07 125.33 By MS/MS By MS/MS 1 1 12537000 4479900 8056800 5217 1016 5808 13057;13058 11943;11944 11943 1881 2 SFDYNYR ERRRSRSRSFDYNYRR RSFDYNYRRSYSPRNR R S F Y R R 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 0 7 0 963.40865 Q5JRI1;O75494 Q5JRI1 133 139 SRSF10 Serine/arginine-rich splicing factor 10 yes no 2 0.0047206 113.71 By matching By MS/MS 1 1 25236000 13438000 11799000 5218 1441 5809 13059;13060 11945 11945 2663 1 SFEEEGEHLGSR RLEAVTARSFEEEGEH EGEHLGSRKHRMSEEK R S F S R K 0 1 0 0 0 0 4 2 1 0 1 0 0 1 0 2 0 0 0 0 0 0 12 0 1375.6004 Q9BXW6 Q9BXW6 499 510 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 2;3 5.7882E-09 141.58 By MS/MS By MS/MS 1 2 44283000 23399000 20884000 5219 2602 5810 13061;13062;13063 11946;11947;11948 11947 5269 2 SFEFEDIQHFR IRGRSKRKSFEFEDIQ FEDIQHFRNRNSQTIR K S F F R N 0 1 0 1 0 1 2 0 1 1 0 0 0 3 0 1 0 0 0 0 0 0 11 0 1453.6626 Q68D51 Q68D51 271 281 DENND2C DENN domain-containing protein 2C yes yes 2 0.020953 62.088 By MS/MS By matching 1 1 1689800 1074000 615730 5220 2133 5811 13064;13065 11949 11949 4244 1 SFEVEEVETPNSTPPR RPFTALKRSFEVEEVE TPNSTPPRRVQTPLLR R S F P R R 0 1 1 0 0 0 4 0 0 0 0 0 0 1 3 2 2 0 0 2 0 0 16 0 1816.8479 K7EJV0;K7EPY1;K7ENL0;Q9UHD8 K7EJV0 15 30 SEPT9 Septin-9 yes no 2 5.2945E-69 195.6 By MS/MS By MS/MS 1 1 30809000 18265000 12544000 5221 1271 5812 13066;13067 11950;11951;11952;11953 11951 2306 4 SFGSPNR LADFGLAKSFGSPNRA KSFGSPNRAYTHQVVT K S F N R A 0 1 1 0 0 0 0 1 0 0 0 0 0 1 1 2 0 0 0 0 0 0 7 0 763.3613 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 68 74 CDK7 Cyclin-dependent kinase 7 yes no 2 0.030256 73.233 By MS/MS By MS/MS 1 2 16401000 5936200 10465000 5222 644 5813 13068;13069;13070 11954;11955 11954 2 SFGSPNRAYTHQVVTR LADFGLAKSFGSPNRA YTHQVVTRWYRAPELL K S F T R W 1 2 1 0 0 1 0 1 1 0 0 0 0 1 1 2 2 0 1 2 0 0 16 1 1818.9125 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 68 83 CDK7 Cyclin-dependent kinase 7 yes no 3 0.025496 45.864 By matching By MS/MS 1 1 53853000 29625000 24228000 5223 644 5814 13071;13072 11956 11956 6390 1 SFKLSGFSFK KKRFSFKKSFKLSGFS KLSGFSFKKNKKEAGE K S F F K K 0 0 0 0 0 0 0 1 0 0 1 2 0 3 0 3 0 0 0 0 0 0 10 1 1146.6073 P29966 P29966 163 172 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.0015682 105.25 By MS/MS By MS/MS 4 4 69964000 42059000 27905000 5224 1648 5815;5816;5817 13073;13074;13075;13076;13077;13078;13079;13080 11957;11958;11959;11960;11961;11962;11963 11958 3045;3050;3051 7 SFKLSGFSFKK KKRFSFKKSFKLSGFS LSGFSFKKNKKEAGEG K S F K K N 0 0 0 0 0 0 0 1 0 0 1 3 0 3 0 3 0 0 0 0 0 0 11 2 1274.7023 P29966 P29966 163 173 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 0.002413 101.61 By MS/MS By MS/MS 4 4 32446000 16235000 16211000 5225 1648 5818;5819 13081;13082;13083;13084;13085;13086;13087;13088 11964;11965;11966;11967;11968;11969;11970 11968 3045;3050;3051 7 SFLESNYFTKPNLK GSSRERRRSFLESNYF YFTKPNLKHTDTANKE R S F L K H 0 0 2 0 0 0 1 0 0 0 2 2 0 2 1 2 1 0 1 0 0 0 14 1 1686.8617 O60293 O60293 1046 1059 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 0.001831 85.45 By MS/MS By MS/MS 1 1 9113200 4271600 4841600 5226 1402 5820 13089;13090 11971;11972 11971 2580 2 SFLQSLECLR MEEEKAKKSFLQSLEC LQSLECLRRSTQSLSL K S F L R R 0 1 0 0 1 1 1 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 10 0 1251.6282 A0A087WW59;Q7Z7L8 A0A087WW59 82 91 C11orf96 Uncharacterized protein C11orf96 yes no 2 0.0040642 80.979 By MS/MS By matching 1 1 4786000 3382200 1403700 5227 71 5821 13091;13092 11973 11973 125 1 SFLSEPSSPGR ________________ SEPSSPGRTKTTKGFK R S F G R T 0 1 0 0 0 0 1 1 0 0 1 0 0 1 2 4 0 0 0 0 0 0 11 0 1162.5619 H0YC41;Q69YN4 H0YC41 5 15 KIAA1429 Protein virilizer homolog yes no 2 1.5169E-06 148.78 By MS/MS By MS/MS 1 1 69607000 37894000 31713000 5228 1058 5822 13093;13094 11974;11975;11976 11974 1964;1965 3 SFLSEPSSPGRTK ________________ PSSPGRTKTTKGFKLG R S F T K T 0 1 0 0 0 0 1 1 0 0 1 1 0 1 2 4 1 0 0 0 0 0 13 1 1391.7045 H0YC41;Q69YN4 H0YC41 5 17 KIAA1429 Protein virilizer homolog yes no 2;3 4.1363E-13 155.39 By MS/MS By MS/MS 2 2 76909000 40145000 36764000 5229 1058 5823 13095;13096;13097;13098 11977;11978;11979;11980 11977 1964;1965 4 SFLVASVLPGPDGNINSPTR DCPELVQRSFLVASVL GNINSPTRNADMQEEL R S F T R N 1 1 2 1 0 0 0 2 0 1 2 0 0 1 3 3 1 0 0 2 0 0 20 0 2040.064 Q7Z3K3 Q7Z3K3 1322 1341 POGZ Pogo transposable element with ZNF domain yes yes 2;3 5.9832E-49 161.35 By MS/MS By MS/MS 2 2 56988000 31392000 25596000 5230 2211 5824 13099;13100;13101;13102 11981;11982;11983;11984 11981 4409;6933 4 SFNGTDNHIR DRNSNVRRSFNGTDNH NGTDNHIRFLQQRMPT R S F I R F 0 1 2 1 0 0 0 1 1 1 0 0 0 1 0 1 1 0 0 0 0 0 10 0 1159.537 Q5T0W9 Q5T0W9 466 475 FAM83B Protein FAM83B yes yes 2 0.004916 78.149 By MS/MS By matching 1 1 5422500 2926400 2496000 5231 2092 5825 13103;13104 11985 11985 4130 1 SFNYSPNSSTSEVSSTSASK SAQPFIPKSFNYSPNS VSSTSASKASIGQSPG K S F S K A 1 0 2 0 0 0 1 0 0 0 0 1 0 1 1 9 2 0 1 1 0 0 20 0 2065.9076 Q5VT52 Q5VT52 589 608 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2;3 2.0134E-130 209.23 By MS/MS By MS/MS 2 2 87621000 46516000 41104000 5232 2115 5826 13105;13106;13107;13108 11986;11987;11988 11988 4194 3 SFPIKPVPSPSWSGSCR CHVSAYEKSFPIKPVP PSWSGSCRRSLLSPKK K S F C R R 0 1 0 0 1 0 0 1 0 1 0 1 0 1 4 5 0 1 0 1 0 0 17 1 1887.9302 Q9P0U3 Q9P0U3 149 165 SENP1 Sentrin-specific protease 1 yes yes 2;3 0.0066403 63.827 By MS/MS By MS/MS 1 2 12096000 4915200 7180500 5233 2775 5827 13109;13110;13111 11989;11990;11991 11989 5693 3 SFSADNFIGIQR LCRAAMRRSFSADNFI DNFIGIQRSKAILS__ R S F Q R S 1 1 1 1 0 1 0 1 0 2 0 0 0 2 0 2 0 0 0 0 0 0 12 0 1353.6677 Q8N7R7 Q8N7R7 342 353 CCNYL1 Cyclin-Y-like protein 1 yes yes 2 3.7638E-27 175.21 By MS/MS By MS/MS 1 1 82640000 54583000 28057000 5234 2324 5828 13112;13113 11992;11993 11993 4664;4665 2 SFSAHCTQVVNAK KVKRRSPKSFSAHCTQ CTQVVNAKKNAIPVSK K S F A K K 2 0 1 0 1 1 0 0 1 0 0 1 0 1 0 2 1 0 0 2 0 0 13 0 1447.6878 B4DUJ5;Q8IWP9 B4DUJ5 13 25 CCDC28A Coiled-coil domain-containing protein 28A yes no 2 3.2268E-07 123.76 By matching By MS/MS 1 1 7377700 3692300 3685300 5235 492 5829 13114;13115 11994 11994 928 1 SFSASQSTDREGASPVTEVR VLQPHRLRSFSASQST ASPVTEVRIKTEPSSP R S F V R I 2 2 0 1 0 1 2 1 0 0 0 0 0 1 1 5 2 0 0 2 0 0 20 1 2109.9927 Q9ULJ3 Q9ULJ3 409 428 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 3 3.4844E-08 87.652 By MS/MS By MS/MS 1 1 45345000 25099000 20247000 5236 2847 5830 13116;13117 11995;11996 11996 5861 2 SFSEDVFQSVK KTKASVRKSFSEDVFQ EDVFQSVKSLLQSQKE K S F V K S 0 0 0 1 0 1 1 0 0 0 0 1 0 2 0 3 0 0 0 2 0 0 11 0 1271.6034 Q9UKA4 Q9UKA4 18 28 AKAP11 A-kinase anchor protein 11 yes yes 2 0.0020623 92.247 By MS/MS By MS/MS 1 1 8293900 4652200 3641800 5237 2827 5831 13118;13119 11997;11998 11998 5818 2 SFSEPFGR ________________ SFSEPFGRDLLSISDG R S F G R D 0 1 0 0 0 0 1 1 0 0 0 0 0 2 1 2 0 0 0 0 0 0 8 0 925.42938 C9K0D3;C9J3M3;P58340 C9K0D3 7 14 MLF1 Myeloid leukemia factor 1 yes no 2 0.0054554 109.44 By MS/MS By MS/MS 1 1 25024000 13110000 11914000 5238 557 5832 13120;13121 11999;12000 11999 1028 2 SFSEPFGRDLLSISDGR ________________ LLSISDGRGRAHNRRG R S F G R G 0 2 0 2 0 0 1 2 0 1 2 0 0 2 1 4 0 0 0 0 0 0 17 1 1881.9221 C9K0D3;C9J3M3;P58340 C9K0D3 7 23 MLF1 Myeloid leukemia factor 1 yes no 3 1.9037E-05 85.496 By matching By MS/MS 1 1 8605700 4959900 3645800 5239 557 5833 13122;13123 12001 12001 1028 1 SFSISPVR SRSVVRRRSFSISPVR SFSISPVRLRRSRTPL R S F V R L 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 3 0 0 0 1 0 0 8 0 891.48142 P18583;H7C1M2;H7C2G8 P18583 2009 2016 SON Protein SON yes no 2 0.012549 74.944 By MS/MS By matching 1 1 3076600 1550300 1526400 5240 1600 5834 13124;13125 12002 12002 2940;2941;2942 1 SFSKEELMSSDLEETAGSTSIPK FSKPKKKKSFSKEELM AGSTSIPKRKKSTPKE K S F P K R 1 0 0 1 0 0 4 1 0 1 2 2 1 1 1 6 2 0 0 0 0 0 23 1 2472.1578 O00567 O00567 511 533 NOP56 Nucleolar protein 56 yes yes 2;3 1.3246E-25 124.79 By MS/MS By MS/MS 5 6 548520000 291280000 257240000 5241 1338 5835;5836;5837;5838 13126;13127;13128;13129;13130;13131;13132;13133;13134;13135;13136 12003;12004;12005;12006;12007;12008;12009;12010;12011;12012 12008 152 2411;2412;2416 10 SFSKEELMSSDLEETAGSTSIPKR FSKPKKKKSFSKEELM GSTSIPKRKKSTPKEE K S F K R K 1 1 0 1 0 0 4 1 0 1 2 2 1 1 1 6 2 0 0 0 0 0 24 2 2628.2589 O00567 O00567 511 534 NOP56 Nucleolar protein 56 yes yes 3;4 1.3456E-33 134.83 By MS/MS By MS/MS 5 5 115900000 57911000 57988000 5242 1338 5839;5840;5841;5842 13137;13138;13139;13140;13141;13142;13143;13144;13145;13146 12013;12014;12015;12016;12017;12018;12019;12020 12017 152 2411;2412;2416 8 SFSKEVEER ARTPATKRSFSKEVEE FSKEVEERSRERPSQP R S F E R S 0 1 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 9 1 1109.5353 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1022 1030 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2;3 0.003063 113.38 By MS/MS By MS/MS 4 4 2087100000 1147100000 940030000 5243 740 5843 13147;13148;13149;13150;13151;13152;13153;13154 12021;12022;12023;12024;12025;12026;12027 12022 1336;1337 7 SFSKEVEERSR ARTPATKRSFSKEVEE KEVEERSRERPSQPEG R S F S R E 0 2 0 0 0 0 3 0 0 0 0 1 0 1 0 3 0 0 0 1 0 0 11 2 1352.6684 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1022 1032 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 0.0065344 86.772 By MS/MS By matching 1 1 24588000 14420000 10168000 5244 740 5844 13155;13156 12028 12028 1336;1337;1338 1 SFSLASSSNSPISQR NNPPLKSRSFSLASSS SNSPISQRRPSQNAIS R S F Q R R 1 1 1 0 0 1 0 0 0 1 1 0 0 1 1 7 0 0 0 0 0 0 15 0 1566.7638 Q9BXB4 Q9BXB4 172 186 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 2;3 6.0971E-36 171.71 By MS/MS By MS/MS 8 9 187460000 103520000 83940000 5245 2597 5845;5846;5847 13157;13158;13159;13160;13161;13162;13163;13164;13165;13166;13167;13168;13169;13170;13171;13172;13173 12029;12030;12031;12032;12033;12034;12035;12036;12037;12038;12039;12040;12041;12042;12043;12044;12045 12033 5259;5260;5261;5262;5263;5264 17 SFSLSWR QKGTTVGRSFSLSWRS RSFSLSWRSHPDVTEP R S F W R S 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 3 0 1 0 0 0 0 7 0 881.43955 H7C1F9;Q2PPJ7 H7C1F9 511 517 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 yes no 2 0.025694 78.516 By MS/MS By MS/MS 1 1 6200800 3621400 2579400 5246 1170 5848 13174;13175 12046;12047 12046 2 SFSMQDLR GALAGRLRSFSMQDLR SFSMQDLRSISDAPAP R S F L R S 0 1 0 1 0 1 0 0 0 0 1 0 1 1 0 2 0 0 0 0 0 0 8 0 982.45422 E5RGS2;Q9H6H4 E5RGS2 150 157 REEP4 Receptor expression-enhancing protein;Receptor expression-enhancing protein 4 yes no 2 0.012387 83.862 By MS/MS By MS/MS 2 2 155730000 80906000 74825000 5247 695 5849;5850 13176;13177;13178;13179 12048;12049;12050 12049 80 1235 3 SFSMQDLTTIR GALSERLRSFSMQDLT MQDLTTIRGDGAPAPS R S F I R G 0 1 0 1 0 1 0 0 0 1 1 0 1 1 0 2 2 0 0 0 0 0 11 0 1297.6336 E7EUF7;A0A1C7CYY3;Q9H902 E7EUF7 157 167 REEP1 Receptor expression-enhancing protein;Receptor expression-enhancing protein 1 yes no 2 0.0023565 90.434 By MS/MS By MS/MS 1 1 4318800 2379900 1938900 5248 386 5851 13180;13181 12051;12052 12051 737;738 2 SFSMQDLTTIRGDGAPAPSGPPPPGSGR GALSERLRSFSMQDLT PPPPGSGRASGKHGQP R S F G R A 2 2 0 2 0 1 0 5 0 1 1 0 1 1 6 4 2 0 0 0 0 0 28 1 2752.3239 E7EUF7;A0A1C7CYY3;Q9H902 E7EUF7 157 184 REEP1 Receptor expression-enhancing protein;Receptor expression-enhancing protein 1 yes no 3 0.00014999 63.63 By MS/MS By MS/MS 1 1 6933500 2644500 4288900 5249 386 5852 13182;13183 12053;12054 12054 737;738 2 SFSPTMK WINDMKMRSFSPTMKV RSFSPTMKVPVVKEDD R S F M K V 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 2 1 0 0 0 0 0 7 0 796.37893 A3KN83 A3KN83 212 218 SBNO1 Protein strawberry notch homolog 1 yes yes 2 0.0070213 104.2 By MS/MS By MS/MS 1 1 7075600 3341100 3734500 5250 404 5853 13184;13185 12055;12056 12055 771 2 SFSSPENFQR SSAQIIQRSFSSPENF SSPENFQRQAVMNSAL R S F Q R Q 0 1 1 0 0 1 1 0 0 0 0 0 0 2 1 3 0 0 0 0 0 0 10 0 1197.5415 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 14 23 RBM7 RNA-binding protein 7 yes no 2 3.4358E-05 120.63 By MS/MS By MS/MS 2 2 149440000 73293000 76147000 5251 962 5854 13186;13187;13188;13189 12057;12058;12059 12058 1753;1754 3 SFSSQRPGMER RAKDLSKRSFSSQRPG SQRPGMERQNRRPGPG R S F E R Q 0 2 0 0 0 1 1 1 0 0 0 0 1 1 1 3 0 0 0 0 0 0 11 1 1280.5932 P48634 P48634 1384 1394 PRRC2A Protein PRRC2A yes yes 3 0.0059786 67.113 By MS/MS By MS/MS 1 1 8147800 4596400 3551300 5252 1718 5855 13190;13191 12060;12061 12061 3216 2 SFSSQRPVDR PKREIAKRSFSSQRPV SSQRPVDRQNRRGNNG R S F D R Q 0 2 0 1 0 1 0 0 0 0 0 0 0 1 1 3 0 0 0 1 0 0 10 1 1177.584 E7EPN9;Q9Y520;H7C5N8 E7EPN9 1544 1553 PRRC2C Protein PRRC2C yes no 2 0.0036204 85.522 By MS/MS By MS/MS 1 1 315830000 170100000 145720000 5253 715 5856 13192;13193 12062;12063 12062 1271;1272 2 SFSSSAEEHS LRNHIRSRSFSSSAEE SSSAEEHS________ R S F H S - 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 5 0 0 0 0 0 0 10 0 1066.4203 Q96EQ0 Q96EQ0 295 304 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 2 0.0013217 104.42 By MS/MS By MS/MS 1 1 40514000 21947000 18567000 5254 2478 5857 13194;13195 12064;12065 12064 4998 2 SFTLDDESLK RSSSSRSRSFTLDDES TLDDESLKYLTHEEKD R S F L K Y 0 0 0 2 0 0 1 0 0 0 2 1 0 1 0 2 1 0 0 0 0 0 10 0 1153.5503 Q86WR7;X6RHS9 Q86WR7 43 52 PROSER2 Proline and serine-rich protein 2 yes no 2 0.0013761 104.07 By MS/MS By MS/MS 1 1 8215000 4238500 3976500 5255 2248 5858 13196;13197 12066;12067 12067 4504 2 SFVPEEEKHEER TRTRGRKRSFVPEEEK EEEKHEERVPRERRQR R S F E R V 0 1 0 0 0 0 5 0 1 0 0 1 0 1 1 1 0 0 0 1 0 0 12 1 1514.7001 A0A0U1RRH6;O94880 A0A0U1RRH6 835 846 PHF14 PHD finger protein 14 yes no 3 0.0059692 65.528 By matching By MS/MS 1 1 11392000 4729700 6662400 5256 351 5859 13198;13199 12068 12068 648 1 SFVPEEEKHEERVPR TRTRGRKRSFVPEEEK KHEERVPRERRQRQSV R S F P R E 0 2 0 0 0 0 5 0 1 0 0 1 0 1 2 1 0 0 0 2 0 0 15 2 1866.9224 A0A0U1RRH6;O94880 A0A0U1RRH6 835 849 PHF14 PHD finger protein 14 yes no 4 0.015133 45.452 By MS/MS 1 7169100 0 7169100 5257 351 5860 13200 12069 12069 648 1 SGAASMPSSPKQAR AGPPPISRSGAASMPS PSSPKQARKMSIQDSL R S G A R K 3 1 0 0 0 1 0 1 0 0 0 1 1 0 2 4 0 0 0 0 0 0 14 1 1373.6721 E9PFQ4;Q86SQ0;E9PDY7;G5E9V3 E9PFQ4 196 209 PHLDB2 Pleckstrin homology-like domain family B member 2 yes no 2 0.0010647 97.203 By MS/MS By MS/MS 1 1 6050300 3192300 2858000 5258 784 5861 13201;13202 12070;12071 12070 1411;1412;1413 2 SGAHSSASPPR FDWGYEERSGAHSSAS HSSASPPRSRSRDRSH R S G P R S 2 1 0 0 0 0 0 1 1 0 0 0 0 0 2 4 0 0 0 0 0 0 11 0 1052.4999 P18615;A0A0A0MT02;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 174 184 NELFE Negative elongation factor E yes no 2 0.00041411 109.16 By MS/MS By MS/MS 1 1 54199000 27456000 26743000 5259 1601 5862 13203;13204 12072;12073;12074 12074 2948;2949 3 SGAQASSTPLSPTR PSQRRATRSGAQASST STPLSPTRITRLQEKE R S G T R I 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 4 2 0 0 0 0 0 14 0 1358.679 Q3BDU5;P02545 Q3BDU5 12 25 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0013916 85.493 By matching By MS/MS 1 2 43763000 21345000 22418000 5260 1517 5863;5864 13205;13206;13207 12075;12076 12075 2805 2 SGASEANLIVAK QMICSKRRSGASEANL EANLIVAKSWADVVKL R S G A K S 3 0 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 12 0 1158.6245 P46013 P46013 648 659 MKI67 Antigen KI-67 yes yes 2 0.0027237 86.699 By matching By MS/MS 1 1 10509000 6828900 3680500 5261 1704 5865 13208;13209 12077 12077 3149 1 SGAVQGAGSLGPGSPVR QNEQLRSRSGAVQGAG LGPGSPVRAGASIPSS R S G V R A 2 1 0 0 0 1 0 5 0 0 1 0 0 0 2 3 0 0 0 2 0 0 17 0 1495.7743 Q9P270 Q9P270 35 51 SLAIN2 SLAIN motif-containing protein 2 yes yes 2 3.2603E-05 92.307 By MS/MS By matching 1 1 9681700 5160600 4521100 5262 2785 5866 13210;13211 12078 12078 5718 1 SGCSEAQPPESPETR IPFGGDTKSGCSEAQP PPESPETRLGQPAAEQ K S G T R L 1 1 0 0 1 1 3 1 0 0 0 0 0 0 3 3 1 0 0 0 0 0 15 0 1630.6893 Q9Y6A5;H0Y8F2 Q9Y6A5 424 438 TACC3 Transforming acidic coiled-coil-containing protein 3 yes no 2 1.356E-20 144.15 By MS/MS By MS/MS 1 1 24056000 12291000 11765000 5263 2944 5867 13212;13213 12079;12080;12081 12079 6116 3 SGDEMIFDPTMSK ________________ IFDPTMSKKKKKKKKP M S G S K K 0 0 0 2 0 0 1 1 0 1 0 1 2 1 1 2 1 0 0 0 0 0 13 0 1456.6214 P20042 P20042 2 14 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 0.00053549 108.97 By MS/MS By MS/MS 2 1 3190700 1850800 1339900 5264 1607 5868;5869 13214;13215;13216 12082;12083;12084 12082 2967 3 SGDYSTMEGPELR RDQRLGVKSGDYSTME TMEGPELRHSQPPTPL K S G L R H 0 1 0 1 0 0 2 2 0 0 1 0 1 0 1 2 1 0 1 0 0 0 13 0 1440.6191 Q9C0H5 Q9C0H5 445 457 ARHGAP39 Rho GTPase-activating protein 39 yes yes 2 8.4136E-11 141.08 By MS/MS By MS/MS 2 1 8904200 6402700 2501500 5265 2621 5870;5871 13217;13218;13219 12085;12086;12087 12085 349 7884 2 SGEGEVSGLMR VSGVKRSRSGEGEVSG GEVSGLMRKVPRVSLE R S G M R K 0 1 0 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 0 1 0 0 11 0 1120.5183 Q13263;M0R0K9 Q13263 473 483 TRIM28 Transcription intermediary factor 1-beta yes no 2 4.7852E-06 130.44 By MS/MS By MS/MS 2 2 160780000 85808000 74970000 5266 1908 5872;5873 13220;13221;13222;13223 12088;12089;12090;12091 12090 251 3654 4 SGEISLPIKEEPSPISK DLFDILIKSGEISLPI EEPSPISKMRPVTASI K S G S K M 0 0 0 0 0 0 3 1 0 3 1 2 0 0 3 4 0 0 0 0 0 0 17 1 1809.9724 Q9ULH7;I3L2A0 Q9ULH7 909 925 MKL2 MKL/myocardin-like protein 2 yes no 2;3 7.917E-08 116.73 By MS/MS By MS/MS 2 2 31093000 17430000 13663000 5267 2845 5874 13224;13225;13226;13227 12092;12093;12094;12095;12096 12092 5851;5852 5 SGEQIFTQDVRPEQLLEGK HRPLANCRSGEQIFTQ PEQLLEGKDAQAIHNW R S G G K D 0 1 0 1 0 3 3 2 0 1 2 1 0 1 1 1 1 0 0 1 0 0 19 1 2173.1015 Q8WXE0 Q8WXE0 471 489 CASKIN2 Caskin-2 yes yes 3 0.00093143 69.272 By MS/MS By MS/MS 1 1 6147300 3211100 2936200 5268 2412 5875 13228;13229 12097;12098 12098 4840 2 SGEQITSSPVSPK GTGRRRRRSGEQITSS TSSPVSPKSLAFTSSI R S G P K S 0 0 0 0 0 1 1 1 0 1 0 1 0 0 2 4 1 0 0 1 0 0 13 0 1315.662 A0A087WWN8;A0A087WZV0;O43314 A0A087WWN8 187 199 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes no 2 0.0032055 81.51 By MS/MS By MS/MS 1 1 0 0 0 5269 80 5876 13230;13231 12099;12100 12099 144;145 2 SGEVAEGEARSPSHK GMQAVKIKSGEVAEGE EARSPSHKKRAADERH K S G H K K 2 1 0 0 0 0 3 2 1 0 0 1 0 0 1 3 0 0 0 1 0 0 15 1 1539.7277 O00257 O00257 281 295 CBX4 E3 SUMO-protein ligase CBX4 yes yes 3 0.0059827 58.32 By MS/MS By MS/MS 1 1 13681000 8988700 4692300 5270 1326 5877 13232;13233 12101;12102 12102 2391 2 SGFEPPGDFPFEDYSQHIYR QMVVDSFKSGFEPPGD DYSQHIYRTISDGTIS K S G Y R T 0 1 0 2 0 1 2 2 1 1 0 0 0 3 3 2 0 0 2 0 0 0 20 0 2387.0495 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 119 138 FNBP1L Formin-binding protein 1-like yes no 3 0.0080469 48.288 By matching By MS/MS 1 1 20221000 13797000 6424600 5271 7 5878 13234;13235 12103 12103 7152 1 SGFGEISSPVIR ________________ EISSPVIREAEVTRTA R S G I R E 0 1 0 0 0 0 1 2 0 2 0 0 0 1 1 3 0 0 0 1 0 0 12 0 1247.651 G3V1T4;P57740 G3V1T4 4 15 NUP107 Nuclear pore complex protein Nup107 yes no 2 5.1789E-07 125.61 By MS/MS By MS/MS 1 1 93211000 53130000 40081000 5272 961 5879 13236;13237 12104;12105 12105 1750;1751 2 SGGLQTPECLSR HPGLMSPRSGGLQTPE QTPECLSREGSPIPHD R S G S R E 0 1 0 0 1 1 1 2 0 0 2 0 0 0 1 2 1 0 0 0 0 0 12 0 1303.619 P85037 P85037 431 442 FOXK1 Forkhead box protein K1 yes yes 2 0.0029032 89.507 By MS/MS By MS/MS 2 2 22185000 13479000 8706400 5273 1818 5880 13238;13239;13240;13241 12106;12107;12108 12107 3400;6759 3 SGGLQTPECLSREGSPIPHDPEFGSK HPGLMSPRSGGLQTPE HDPEFGSKLASVPEYR R S G S K L 0 1 0 1 1 1 3 4 1 1 2 1 0 1 4 4 1 0 0 0 0 0 26 1 2781.3028 P85037 P85037 431 456 FOXK1 Forkhead box protein K1 yes yes 3 0.0001314 65.677 By MS/MS By MS/MS 2 2 94408000 49925000 44484000 5274 1818 5881;5882 13242;13243;13244;13245 12109;12110;12111 12109 3395;3400;6759 3 SGGNEVSIEER EQVESKRKSGGNEVSI NEVSIEERLGAMDIDT K S G E R L 0 1 1 0 0 0 3 2 0 1 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1175.5418 Q15061 Q15061 431 441 WDR43 WD repeat-containing protein 43 yes yes 2 0.011549 67.952 By matching By MS/MS 1 1 8051500 4017600 4034000 5275 1976 5883 13246;13247 12112 12112 3850 1 SGGVTEASSLLGGSPR YSTRGDQRSGGVTEAS SLLGGSPRRPCGRKGS R S G P R R 1 1 0 0 0 0 1 4 0 0 2 0 0 0 1 4 1 0 0 1 0 0 16 0 1473.7423 Q92729 Q92729 840 855 PTPRU Receptor-type tyrosine-protein phosphatase U yes yes 2 7.1614E-24 152.66 By MS/MS By MS/MS 1 1 13998000 7555800 6442100 5276 2434 5884 13248;13249 12113;12114 12114 4896 2 SGITSPVEKR LSHGASQRSGITSPVE ITSPVEKREDPGTGMG R S G K R E 0 1 0 0 0 0 1 1 0 1 0 1 0 0 1 2 1 0 0 1 0 0 10 1 1072.5877 O14686 O14686 2636 2645 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.021673 83.045 By MS/MS By MS/MS 1 1 16448000 8001600 8446000 5277 1344 5885 13250;13251 12115;12116 12115 2 SGKNSQEDSEDSEDKDVK REAKNKRRSGKNSQED DSEDKDVKTKKDDSHS R S G V K T 0 0 1 4 0 1 3 1 0 0 0 3 0 0 0 4 0 0 0 1 0 0 18 2 1995.8505 Q9H1E3 Q9H1E3 50 67 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 1.2059E-67 188.86 By MS/MS By MS/MS 3 3 367120000 207470000 159650000 5278 2637 5886;5887 13252;13253;13254;13255;13256;13257 12117;12118;12119;12120;12121;12122 12120 5377;5378 6 SGLEPASSPSKGSEPRPLVPPVSGHATIAR FLAKPPARSGLEPASS SGHATIARTPAKNLAP R S G A R T 3 2 0 0 0 0 2 3 1 1 2 1 0 0 6 6 1 0 0 2 0 0 30 2 2980.573 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7 C9JE98 1954 1983 NCOR2 Nuclear receptor corepressor 2 yes no 4 0.00056945 54.419 By MS/MS 1 6156300 6156300 0 5279 552 5888 13258 12123 12123 1020;1021 1 SGLSDIILGK EAALFLKKSGLSDIIL LSDIILGKIWDLADPE K S G G K I 0 0 0 1 0 0 0 2 0 2 2 1 0 0 0 2 0 0 0 0 0 0 10 0 1001.5757 M0R165;Q9UBC2;K7EJR2;M0R330;M0QX30;M0R1V5 M0R165 46 55 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 2 0.030085 58.511 By MS/MS By matching 1 1 6887600 3318800 3568800 5280 1319 5889 13259;13260 12124 12124 1 SGLSLEELR FSSVAMTRSGLSLEEL GLSLEELRIVEGQGQS R S G L R I 0 1 0 0 0 0 2 1 0 0 3 0 0 0 0 2 0 0 0 0 0 0 9 0 1002.5346 A0A087WWA3;Q4R9M9;O60333 A0A087WWA3 1028 1036 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B yes no 2 0.0088461 75.819 By MS/MS By matching 1 1 7219700 3429500 3790300 5281 74 5890 13261;13262 12125 12125 128 1 SGLTVPTSPK DSGSDALRSGLTVPTS LTVPTSPKGRLLDRRS R S G P K G 0 0 0 0 0 0 0 1 0 0 1 1 0 0 2 2 2 0 0 1 0 0 10 0 985.54441 Q53EL6;Q5VZS7 Q53EL6 87 96 PDCD4 Programmed cell death protein 4 yes no 2 0.00014679 114.76 By MS/MS By MS/MS 1 1 722330000 411330000 310990000 5282 2053 5891 13263;13264 12126;12127 12127 4035;6865 2 SGLTVPTSPKGR DSGSDALRSGLTVPTS VPTSPKGRLLDRRSRS R S G G R L 0 1 0 0 0 0 0 2 0 0 1 1 0 0 2 2 2 0 0 1 0 0 12 1 1198.667 Q53EL6;Q5VZS7 Q53EL6 87 98 PDCD4 Programmed cell death protein 4 yes no 2;3 1.2441E-06 122.52 By MS/MS By MS/MS 2 2 108220000 50380000 57840000 5283 2053 5892 13265;13266;13267;13268 12128;12129;12130;12131 12129 4035;6865 4 SGMFHGTAWLNR S G N R 1 1 1 0 0 0 0 2 1 0 1 0 1 1 0 1 1 1 0 0 0 0 12 0 1375.6455 REV__P08949 yes yes 2 0.017492 43.761 By matching By MS/MS 1 1 4800200 2314400 2485800 + 5284 2985 5893 13269;13270 12132 12132 6174 1 SGMSPEQSR FSASPMLKSGMSPEQS GMSPEQSRFQSDSSSY K S G S R F 0 1 0 0 0 1 1 1 0 0 0 0 1 0 1 3 0 0 0 0 0 0 9 0 977.42364 Q9UQ35 Q9UQ35 1129 1137 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.019355 75.566 By MS/MS By MS/MS 1 1 0 0 0 5285 2877 5894 13271;13272 12133;12134 12133 5971 2 SGPFVDQLKQCFSRQPTEPK HSFCKDRRSGPFVDQL SRQPTEPKDTDTLVHE R S G P K D 0 1 0 1 1 3 1 1 0 0 1 2 0 2 3 2 1 0 0 1 0 0 20 2 2348.1583 Q9BY89 Q9BY89 1506 1525 KIAA1671 Uncharacterized protein KIAA1671 yes yes 3 0.02839 44.831 By MS/MS By matching 1 1 5418800 3026600 2392200 5286 2604 5895 13273;13274 12135 12135 1 SGPKPFSAPKPQTSPSPK KAQSGPVRSGPKPFSA PQTSPSPKRATKKEPA R S G P K R 1 0 0 0 0 1 0 1 0 0 0 3 0 1 6 4 1 0 0 0 0 0 18 2 1836.9734 Q01518 Q01518 295 312 CAP1 Adenylyl cyclase-associated protein 1 yes yes 2;3 0.00098317 81.713 By MS/MS By MS/MS 3 3 248380000 136260000 112110000 5287 1830 5896;5897 13275;13276;13277;13278;13279;13280 12136;12137;12138 12136 3426;3427;6762 3 SGPLEACYGELGQSR SRMLRQQRSGPLEACY YGELGQSRMYFNASGP R S G S R M 1 1 0 0 1 1 2 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 15 0 1622.7359 Q9NXD2 Q9NXD2 701 715 MTMR10 Myotubularin-related protein 10 yes yes 2 3.3539E-06 114.76 By matching By MS/MS 1 1 19539000 10213000 9326200 5288 2752 5898 13281;13282 12139 12139 7914 1 SGQSLTVPESTYTSIQGDPQR KPGQLVNKSGQSLTVP SIQGDPQRSPSSCNDL K S G Q R S 0 1 0 1 0 3 1 2 0 1 1 0 0 0 2 4 3 0 1 1 0 0 21 0 2250.0764 Q9NWQ8 Q9NWQ8 330 350 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 1.2805E-06 84.842 By MS/MS By MS/MS 1 1 41249000 22832000 18417000 5289 2746 5899 13283;13284 12140;12141 12141 7909 2 SGRSPQEASSTK ARAEISERSGRSPQEA PQEASSTKSSIAPEEQ R S G T K S 1 1 0 0 0 1 1 1 0 0 0 1 0 0 1 4 1 0 0 0 0 0 12 1 1233.5949 A0A1B0GVD3;Q6ZN17 A0A1B0GVD3 226 237 LIN28B Protein lin-28 homolog B yes no 2 0.0015554 99.927 By matching By MS/MS 1 1 13823000 5284300 8538700 5290 378 5900 13285;13286 12142 12142 716 1 SGSAAQAEGLCK AGLRKRGRSGSAAQAE AQAEGLCKQWLQRAWQ R S G C K Q 3 0 0 0 1 1 1 2 0 0 1 1 0 0 0 2 0 0 0 0 0 0 12 0 1177.5397 F8WF93;H7BZZ2;F8WE30;H7C0X4;Q92685 F8WF93 11 22 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase yes no 2 0.0009588 103.11 By MS/MS By MS/MS 2 1 17230000 11173000 6057100 5291 953 5901 13287;13288;13289 12143;12144;12145;12146;12147 12144 1724;1725 5 SGSAAQAEGLCKQWLQR AGLRKRGRSGSAAQAE LCKQWLQRAWQERRLL R S G Q R A 3 1 0 0 1 3 1 2 0 0 2 1 0 0 0 2 0 1 0 0 0 0 17 1 1888.9214 F8WF93;H7BZZ2;F8WE30;H7C0X4;Q92685 F8WF93 11 27 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase yes no 3 0.0015584 66.777 By MS/MS 1 5093900 5093900 0 5292 953 5902 13290 12148 12148 1724;1725 1 SGSDAGEARPPTPASPR PVRGPLLRSGSDAGEA PPTPASPRARAHSHEE R S G P R A 3 2 0 1 0 0 1 2 0 0 0 0 0 0 4 3 1 0 0 0 0 0 17 1 1651.7914 F6RY50;Q96FS4;E9PIB3 F6RY50 53 69 SIPA1 Signal-induced proliferation-associated protein 1 yes no 3 0.0049328 57.414 By MS/MS By matching 1 1 9624000 4712000 4912000 5293 901 5903 13291;13292 12149 12149 1616 1 SGSELPSILPEIWPK PLRRSQRKSGSELPSI ILPEIWPKTPSAAAVR K S G P K T 0 0 0 0 0 0 2 1 0 2 2 1 0 0 3 3 0 1 0 0 0 0 15 0 1651.8821 B5MBX0;Q96FF9 B5MBX0 33 47 CDCA5 Sororin yes no 2 0.012749 58.268 By MS/MS 1 2335700 2335700 0 5294 500 5904 13293 12150 12150 939 1 SGSGISVISSTSVDQR PPSFRRVRSGSGISVI SSTSVDQRLPEEPVLE R S G Q R L 0 1 0 1 0 1 0 2 0 2 0 0 0 0 0 6 1 0 0 2 0 0 16 0 1578.7849 F8W7U0;Q15811;A8CTZ0;D6PAW0;C9JQZ7 F8W7U0 313 328 ITSN1 Intersectin-1 yes no 2 0.00017812 96.773 By MS/MS By MS/MS 1 1 28092000 15833000 12259000 5295 939 5905 13294;13295 12151;12152;12153 12151 1698;1699 3 SGSGNFGGGRGGGFGGNDNFGR ASSSQRGRSGSGNFGG GGNDNFGRGGNFSGRG R S G G R G 0 2 3 1 0 0 0 11 0 0 0 0 0 3 0 2 0 0 0 0 0 0 22 1 2029.8739 F8W6I7;P09651;H0YH80 F8W6I7 197 218 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 3 0.00013541 73.649 By MS/MS By MS/MS 1 1 26069000 15297000 10772000 5296 933 5906 13296;13297 12154;12155 12155 1675 2 SGSIVELIAGGGSSCSPVLSR EESGGRSRSGSIVELI SCSPVLSRKQKGKVLL R S G S R K 1 1 0 0 1 0 1 4 0 2 2 0 0 0 1 6 0 0 0 2 0 0 21 0 2032.0259 P42858 P42858 417 437 HTT Huntingtin yes yes 2;3 5.4711E-174 232.57 By MS/MS By MS/MS 5 6 249050000 137770000 111280000 5297 1700 5907;5908 13298;13299;13300;13301;13302;13303;13304;13305;13306;13307;13308 12156;12157;12158;12159;12160;12161;12162;12163;12164;12165 12162 3126;3127;3128;3129;3130;3131 10 SGSIVELIAGGGSSCSPVLSRK EESGGRSRSGSIVELI CSPVLSRKQKGKVLLG R S G R K Q 1 1 0 0 1 0 1 4 0 2 2 1 0 0 1 6 0 0 0 2 0 0 22 1 2160.1209 P42858 P42858 417 438 HTT Huntingtin yes yes 2;3 0.0051413 62.064 By matching By MS/MS 1 2 15825000 5093300 10732000 5298 1700 5909 13309;13310;13311 12166;12167;12168 12166 3126;3127;3128;3129;3130;3131 3 SGSKENVQETQI IHEPLLFKSGSKENVQ ENVQETQI________ K S G Q I - 0 0 1 0 0 2 2 1 0 1 0 1 0 0 0 2 1 0 0 1 0 0 12 1 1318.6365 Q9NT99 Q9NT99 702 713 LRRC4B Leucine-rich repeat-containing protein 4B yes yes 2 0.00018595 113.99 By MS/MS By MS/MS 1 1 14155000 7105400 7049800 5299 2730 5910 13312;13313 12169;12170 12170 5580;5581 2 SGSLDDSFSDFQELPASSK QDFQDASKSGSLDDSF QELPASSKTSNSQHGN K S G S K T 1 0 0 3 0 1 1 1 0 0 2 1 0 2 1 6 0 0 0 0 0 0 19 0 2015.896 Q9UMZ2 Q9UMZ2 467 485 SYNRG Synergin gamma yes yes 2 0.0026275 67.095 By MS/MS By matching 1 1 16448000 9375400 7072800 5300 2859 5911 13314;13315 12171 12171 5892 1 SGSLDSELSVSPK PSAPSIAKSGSLDSEL SELSVSPKRNSISRTH K S G P K R 0 0 0 1 0 0 1 1 0 0 2 1 0 0 1 5 0 0 0 1 0 0 13 0 1304.646 Q12802;A0A087WTD7;A8MYJ1 Q12802 2718 2730 AKAP13 A-kinase anchor protein 13 yes no 2 1.4729E-10 141.06 By MS/MS By MS/MS 1 1 13783000 8182200 5600700 5301 1877 5912 13316;13317 12172;12173 12173 3562 2 SGSMDPSGAHPSVR RMSRSSGRSGSMDPSG SGAHPSVRQTPSRQPP R S G V R Q 1 1 0 1 0 0 0 2 1 0 0 0 1 0 2 4 0 0 0 1 0 0 14 0 1383.6201 Q07666 Q07666 18 31 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 2;3 4.0792E-05 116.58 By MS/MS By MS/MS 4 4 1296600000 675560000 620990000 5302 1862 5913;5914 13318;13319;13320;13321;13322;13323;13324;13325 12174;12175;12176;12177;12178;12179;12180;12181;12182;12183 12179 240 3504;3505 10 SGSNGSVVSLEQQQK AAFQRKRRSGSNGSVV VSLEQQQKIEEQKKWL R S G Q K I 0 0 1 0 0 3 1 2 0 0 1 1 0 0 0 4 0 0 0 2 0 0 15 0 1546.7587 Q2M1P5 Q2M1P5 893 907 KIF7 Kinesin-like protein KIF7 yes yes 2 1.4641E-28 160.63 By MS/MS By MS/MS 1 1 10021000 5358500 4662000 5303 2029 5915 13326;13327 12184;12185 12184 3964;3965 2 SGSPAPETTNESVPFAQHSSLDSR PRPASPARSGSPAPET QHSSLDSRIEMLLKEQ R S G S R I 2 1 1 1 0 1 2 1 1 0 1 0 0 1 3 6 2 0 0 1 0 0 24 0 2500.1466 O15047 O15047 468 491 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 3 0.012651 45.193 By MS/MS By matching 1 1 23535000 12069000 11466000 5304 1354 5916 13328;13329 12186 12186 2472 1 SGSPDVKGPPPVK LRDSPDRRSGSPDVKG VKGPPPVKVARLEQNG R S G V K V 0 0 0 1 0 0 0 2 0 0 0 2 0 0 4 2 0 0 0 2 0 0 13 1 1263.6823 C9JR56;Q9UPW6;F8WCV6 C9JR56 18 30 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 yes no 2;3 0.00065747 93.716 By MS/MS By MS/MS 2 2 26864000 13093000 13771000 5305 604 5917 13330;13331;13332;13333 12187;12188;12189 12188 1099 3 SGSPDVKGPPPVKVAR LRDSPDRRSGSPDVKG PPPVKVARLEQNGSPM R S G A R L 1 1 0 1 0 0 0 2 0 0 0 2 0 0 4 2 0 0 0 3 0 0 16 2 1589.8889 C9JR56;Q9UPW6;F8WCV6 C9JR56 18 33 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 yes no 3 0.00092146 76.311 By MS/MS By MS/MS 1 1 11421000 6134500 5286200 5306 604 5918 13334;13335 12190;12191 12190 1099 2 SGSPGRVLTTTALSTVSSGVQR SQSQPGSRSGSPGRVL TVSSGVQRVLVNSASA R S G Q R V 1 2 0 0 0 1 0 3 0 0 2 0 0 0 1 5 4 0 0 3 0 0 22 1 2160.1499 E3W994;J3KR49;O75122;E7ERI8;E7EW49;A0A0U1RQI6 E3W994 461 482 CLASP2 CLIP-associating protein 2 yes no 2;3 0.00070152 64.295 By MS/MS By MS/MS 2 2 104930000 44837000 60097000 5307 690 5919 13336;13337;13338;13339 12192;12193;12194 12193 1224;1225;6404;6405 3 SGSPKLDPSEVYLK PFPPSIIRSGSPKLDP DPSEVYLKSKTLYEDK R S G L K S 0 0 0 1 0 0 1 1 0 0 2 2 0 0 2 3 0 0 1 1 0 0 14 1 1518.793 Q5TCQ9 Q5TCQ9 722 735 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 yes yes 2;3 0.00015913 108.75 By MS/MS By MS/MS 2 2 25407000 12624000 12783000 5308 2109 5920 13340;13341;13342;13343 12195;12196;12197;12198 12196 4163;4164 4 SGSPNLPHSVSSYK PHREKYPRSGSPNLPH PHSVSSYKSREDGYYR R S G Y K S 0 0 1 0 0 0 0 1 1 0 1 1 0 0 2 5 0 0 1 1 0 0 14 0 1458.7103 Q5T481 Q5T481 740 753 RBM20 RNA-binding protein 20 yes yes 2;3 0.0018981 79.337 By MS/MS By MS/MS 2 2 49476000 26191000 23285000 5309 2095 5921 13344;13345;13346;13347 12199;12200;12201 12200 4140;4141 3 SGSPRPTEPTDFLMLFEGSPSGK TTQVSQPRSGSPRPTE FEGSPSGKKRPASLST R S G G K K 0 1 0 1 0 0 2 3 0 0 2 1 1 2 4 4 2 0 0 0 0 0 23 1 2436.1631 I3L2J8;Q9UPN4 I3L2J8 87 109 CEP131 Centrosomal protein of 131 kDa yes no 3 5.7747E-09 86.761 By MS/MS By MS/MS 1 1 14372000 6226500 8145000 5310 1208 5922 13348;13349 12202;12203 12202 139 2194 2 SGSPSDNSGAEEMEVSLAKPK EEEEMDFRSGSPSDNS EVSLAKPKHRVTMNEF R S G P K H 2 0 1 1 0 0 3 2 0 0 1 2 1 0 2 5 0 0 0 1 0 0 21 1 2118.9739 P31749 P31749 122 142 AKT1 RAC-alpha serine/threonine-protein kinase yes yes 2;3 4.4641E-05 79.511 By MS/MS By MS/MS 2 3 36098000 14855000 21244000 5311 1662 5923;5924 13350;13351;13352;13353;13354 12204;12205;12206;12207;12208 12206 3062;3063;3064 5 SGSSSPDSEITELK PRDTYSDRSGSSSPDS DSEITELKFPSINHD_ R S G L K F 0 0 0 1 0 0 2 1 0 1 1 1 0 0 1 5 1 0 0 0 0 0 14 0 1435.6678 P17812 P17812 571 584 CTPS1 CTP synthase 1 yes yes 2 0.0012299 87.863 By MS/MS By MS/MS 2 2 17745000 13761000 3984300 5312 1596 5925;5926 13355;13356;13357;13358 12209;12210 12209 2930;2931;2932;2933 2 SGSSSPDSEITELKFPSINHD PRDTYSDRSGSSSPDS KFPSINHD________ R S G H D - 0 0 1 2 0 0 2 1 1 2 1 1 0 1 2 6 1 0 0 0 0 0 21 1 2246.0339 P17812 P17812 571 591 CTPS1 CTP synthase 1 yes yes 2;3 1.2877E-25 134.06 By MS/MS By MS/MS 3 3 266510000 126120000 140390000 5313 1596 5927;5928 13359;13360;13361;13362;13363;13364 12211;12212;12213;12214;12215 12214 2930;2931;2932;2933 5 SGSVYEPLK SPSSAFLRSGSVYEPL GSVYEPLKSINLPRPD R S G L K S 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 2 0 0 1 1 0 0 9 0 978.50221 I3L3F2;H3BV13;H3BQ89;Q93100 I3L3F2 18 26 PHKB Phosphorylase b kinase regulatory subunit beta yes no 2 0.0041415 106.4 By MS/MS By MS/MS 1 1 4210700 2054300 2156400 5314 1128 5929 13365;13366 12216;12217 12216 2061 2 SGSWAAIYQDIR KEFEQIDKSGSWAAIY AAIYQDIRHEASDFPC K S G I R H 2 1 0 1 0 1 0 1 0 2 0 0 0 0 0 2 0 1 1 0 0 0 12 0 1365.6677 P18031 P18031 13 24 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 0.002211 79.07 By MS/MS By MS/MS 1 1 9390300 5189900 4200400 5315 1598 5930 13367;13368 12218;12219 12219 7568 2 SGSYSYLEER RYDSLLGRSGSYSYLE SYSYLEERKPYSSRLE R S G E R K 0 1 0 0 0 0 2 1 0 0 1 0 0 0 0 3 0 0 2 0 0 0 10 0 1189.5251 O14974;A0A0U1RQZ1;H0YIM2;H0YIS3 O14974 908 917 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 1.0462E-05 128.27 By MS/MS By MS/MS 2 2 34571000 19295000 15277000 5316 1349 5931 13369;13370;13371;13372 12220;12221;12222;12223 12220 2459;7514 4 SGTLKSPPKGFDTTAINK SEKPVSPKSGTLKSPP FDTTAINKSYYNVVLQ K S G N K S 1 0 1 1 0 0 0 2 0 1 1 3 0 1 2 2 3 0 0 0 0 0 18 2 1860.9945 B1ALK7;Q14155;E7EUY6;E7EU80 B1ALK7 74 91 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes no 3 0.010632 53.861 By matching By MS/MS 1 1 5984100 1845600 4138500 5317 462 5932 13373;13374 12224 12224 891 1 SGTLSPEIFEK TDSASWIRSGTLSPEI LSPEIFEKSTIDSNEN R S G E K S 0 0 0 0 0 0 2 1 0 1 1 1 0 1 1 2 1 0 0 0 0 0 11 0 1206.6132 O60673 O60673 1720 1730 REV3L DNA polymerase zeta catalytic subunit yes yes 2 0.0033821 84.169 By MS/MS By MS/MS 1 1 3039800 1647000 1392800 5318 1416 5933 13375;13376 12225;12226 12225 2605 2 SGTPTQDEMMDKPTSSSVDTMSLLSK GTPVRDERSGTPTQDE DTMSLLSKIISPGSST R S G S K I 0 0 0 3 0 1 1 1 0 0 2 2 3 0 2 6 4 0 0 1 0 0 26 1 2772.2504 Q5VT52 Q5VT52 730 755 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 1.2993E-07 80.608 By MS/MS By MS/MS 1 1 37933000 23533000 14399000 5319 2115 5934 13377;13378 12227;12228;12229 12228 6892 3 SGTSSPQSPVFR LGLAIEPKSGTSSPQS SPQSPVFRHRTLENSP K S G F R H 0 1 0 0 0 1 0 1 0 0 0 0 0 1 2 4 1 0 0 1 0 0 12 0 1248.6099 Q8N556 Q8N556 661 672 AFAP1 Actin filament-associated protein 1 yes yes 2 0.0030235 84.734 By matching By MS/MS 1 1 56335000 31325000 25009000 5320 2313 5935 13379;13380 12230 12230 4648 1 SGVFPSNYVRLKDSEGSGTAGK WTGTVGDKSGVFPSNY EGSGTAGKTGSLGKKP K S G G K T 1 1 1 1 0 0 1 4 0 0 1 2 0 1 1 4 1 0 1 2 0 0 22 2 2255.1182 CON__ENSEMBL:ENSBTAP00000001528 CON__ENSEMBL:ENSBTAP00000001528 1049 1070 yes yes 3 0.025289 50.404 By matching By MS/MS 1 1 11043000 5755000 5288000 + 5321 628 5936 13381;13382 12231 12231 0 SGVSITIDDPVR RRSISQQKSGVSITID ITIDDPVRTAQVPSPP K S G V R T 0 1 0 2 0 0 0 1 0 2 0 0 0 0 1 2 1 0 0 2 0 0 12 0 1257.6565 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 929 940 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 2 0.022872 69.716 By MS/MS 1 0 0 0 5322 725;968 5937 13383 12232 12232 1 SGVSITIDDPVRTAQVPSPPRGK RRSISQQKSGVSITID VPSPPRGKISNIVHIS K S G G K I 1 2 0 2 0 1 0 2 0 2 0 1 0 0 4 3 2 0 0 3 0 0 23 2 2376.2761 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 929 951 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 3;4 4.7291E-13 95.414 By MS/MS By MS/MS 2 2 104360000 70818000 33546000 5323 725;968 5938 13384;13385;13386;13387 12233;12234;12235;12236;12237;12238 12234 1297 6 SGVSLAALK AVAASKERSGVSLAAL GVSLAALKKALAAAGY R S G L K K 2 0 0 0 0 0 0 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 9 0 844.50182 P16402;P16403;P10412 P10412 55 63 HIST1H1D;HIST1H1C;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.4 no no 2 0.005434 93.162 By MS/MS By MS/MS 1 1 24506000 13069000 11437000 5324 1556;1586 5939 13388;13389 12239;12240 12239 2 SGVSLAALKK AVAASKERSGVSLAAL VSLAALKKALAAAGYD R S G K K A 2 0 0 0 0 0 0 1 0 0 2 2 0 0 0 2 0 0 0 1 0 0 10 1 972.59678 P16402;P16403;P10412 P10412 55 64 HIST1H1D;HIST1H1C;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.4 no no 2 0.0025221 101.9 By MS/MS By MS/MS 1 1 6380800 4286700 2094100 5325 1556;1586 5940 13390;13391 12241;12242 12242 2 SGYHDDSDEDLLE DTASHTNKSGYHDDSD DSDEDLLE________ K S G L E - 0 0 0 4 0 0 2 1 1 0 2 0 0 0 0 2 0 0 1 0 0 0 13 0 1493.5794 Q99523 Q99523 819 831 SORT1 Sortilin yes yes 2 8.7684E-22 171.67 By MS/MS By MS/MS 1 1 113040000 61302000 51735000 5326 2550 5941 13392;13393 12243;12244 12243 5158 2 SGYISESENSEISQQVR ETVDEIVKSGYISESE SEISQQVRFKTVTVLA K S G V R F 0 1 1 0 0 2 3 1 0 2 0 0 0 0 0 5 0 0 1 1 0 0 17 0 1911.881 A0A075B754;Q96QE3 A0A075B754 302 318 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 3.0176E-05 94.454 By MS/MS By MS/MS 1 1 9420800 5232800 4188000 5327 12 5942 13394;13395 12245;12246 12246 28 2 SGYMSDSDLMGK DSDEVDLKSGYMSDSD SDSDLMGKTMTEDDDI K S G G K T 0 0 0 2 0 0 0 2 0 0 1 1 2 0 0 3 0 0 1 0 0 0 12 0 1289.5268 A0A0A0MRJ3;Q8NEY1 Q8NEY1 400 411 NAV1 Neuron navigator 1 no no 2 0.021876 59.426 By MS/MS By matching 1 1 8103100 4798600 3304400 5328 188;2350 5943 13396;13397 12247 12247 1 SGYSSPGSPGTPGSR EPPKSGDRSGYSSPGS SPGTPGSRSRTPSLPT R S G S R S 0 1 0 0 0 0 0 4 0 0 0 0 0 0 3 5 1 0 1 0 0 0 15 0 1392.627 I3L170;A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636 I3L170 126 140 MAPT Microtubule-associated protein;Microtubule-associated protein tau yes no 2 0.0038555 66.568 By MS/MS By MS/MS 1 1 52804000 28997000 23807000 5329 323 5944 13398;13399 12248;12249 12248 607;608 2 SHDWSSLATR PRPKGRNRSHDWSSLA DWSSLATRGLPSSIMR R S H T R G 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 3 1 1 0 0 0 0 10 0 1158.5418 Q14999 Q14999 1124 1133 CUL7 Cullin-7 yes yes 2 6.3238E-05 119.03 By MS/MS By matching 1 1 4894400 2570500 2323800 5330 1962 5945 13400;13401 12250 12250 3814 1 SHGLEPAAPSPR LQLEAHLRSHGLEPAA EPAAPSPRLRPEESLD R S H P R L 2 1 0 0 0 0 1 1 1 0 1 0 0 0 3 2 0 0 0 0 0 0 12 0 1217.6153 Q9ULL5 Q9ULL5 35 46 PRR12 Proline-rich protein 12 yes yes 2;3 0.0012778 98.582 By MS/MS By MS/MS 2 2 27501000 14906000 12595000 5331 2851 5946 13402;13403;13404;13405 12251;12252;12253 12253 5867 3 SHHAPMSPGSSGGGGQPLAR ASGGAQQRSHHAPMSP GGGQPLARTPQPSSPM R S H A R T 2 1 0 0 0 1 0 5 2 0 1 0 1 0 3 4 0 0 0 0 0 0 20 0 1886.8806 O14497 O14497 357 376 ARID1A AT-rich interactive domain-containing protein 1A yes yes 3 2.5737E-08 89.846 By MS/MS By MS/MS 2 2 51141000 26962000 24179000 5332 1339 5947;5948 13406;13407;13408;13409 12254;12255;12256 12255 153 2419 3 SHILEDDENSVDISMLK ASGRPRQRSHILEDDE SVDISMLKTGSSLLKE R S H L K T 0 0 1 3 0 0 2 0 1 2 2 1 1 0 0 3 0 0 0 1 0 0 17 0 1943.9146 O75717 O75717 374 390 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.0044577 64.827 By MS/MS By matching 2 2 23286000 14858000 8427700 5333 1448 5949;5950 13410;13411;13412;13413 12257;12258 12257 2680 1 SHISDQSPLSSK IQPLCPERSHISDQSP DQSPLSSKRKALEESE R S H S K R 0 0 0 1 0 1 0 0 1 1 1 1 0 0 1 5 0 0 0 0 0 0 12 0 1284.631 P42166 P42166 345 356 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 6.6158E-09 140.77 By MS/MS By MS/MS 1 1 26833000 12363000 14470000 5334 1695 5951 13414;13415 12259;12260 12259 3110 2 SHNNFVAILDLPEGEHQYK WSKLPLTRSHNNFVAI PEGEHQYKFFVDGQWT R S H Y K F 1 0 2 1 0 1 2 1 2 1 2 1 0 1 1 1 0 0 1 1 0 0 19 0 2210.0756 Q9Y478 Q9Y478 108 126 PRKAB1 5-AMP-activated protein kinase subunit beta-1 yes yes 3 0.011008 48.84 By MS/MS By MS/MS 1 1 8354300 3109800 5244500 5335 2915 5952 13416;13417 12261;12262 12262 6065 2 SHSITNMEIGGLK GPVGSVVKSHSITNME NMEIGGLKIYDILSDN K S H L K I 0 0 1 0 0 0 1 2 1 2 1 1 1 0 0 2 1 0 0 0 0 0 13 0 1385.6973 Q96RT1 Q96RT1 870 882 ERBB2IP Protein LAP2 yes yes 2 0.016769 59.294 By MS/MS By matching 1 1 4138100 2250500 1887600 5336 2536 5953 13418;13419 12263 12263 338 5114 1 SHSLPSSIIF PNYRTLKRSHSLPSSI SLPSSIIF________ R S H I F - 0 0 0 0 0 0 0 0 1 2 1 0 0 1 1 4 0 0 0 0 0 0 10 0 1086.571 Q86Z20 Q86Z20 502 511 CCDC125 Coiled-coil domain-containing protein 125 yes yes 2 2.2058E-05 132.01 By MS/MS By MS/MS 1 1 3025300 1626800 1398400 5337 2259 5954 13420;13421 12264;12265 12265 4534;4535 2 SHSLSIR RQTKQKRKSHSLSIRR KSHSLSIRRTNSSEQE K S H I R R 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 3 0 0 0 0 0 0 7 0 798.4348 E7EQ49;A0A087WTQ2;Q9Y2I8 E7EQ49 20 26 WDR37 WD repeat-containing protein 37 yes no 2 0.025574 78.77 By matching By MS/MS 1 1 4237700 2013600 2224100 5338 29 5955 13422;13423 12266 12266 1 SHSPSIDGTPK TKTVTPKRSHSPSIDG PSIDGTPKRLKDVEKF R S H P K R 0 0 0 1 0 0 0 1 1 1 0 1 0 0 2 3 1 0 0 0 0 0 11 0 1124.5462 Q9BWT3;A0A0C4DH56 Q9BWT3 646 656 PAPOLG Poly(A) polymerase gamma yes no 2 0.0042165 79.283 By MS/MS By matching 1 1 7560400 3814700 3745700 5339 2593 5956 13424;13425 12267 12267 5250 1 SHSPSSPDPDTPSPVGDSR SPHLDSSRSHSPSSPD PSPVGDSRALQASRNT R S H S R A 0 1 0 3 0 0 0 1 1 0 0 0 0 0 5 6 1 0 0 1 0 0 19 0 1920.845 H0YDB2;E9PNJ4;Q13586;G0XQ39 H0YDB2 378 396 STIM1 Stromal interaction molecule 1 yes no 2;3 0.00099961 68.525 By MS/MS By MS/MS 4 4 41422000 21579000 19842000 5340 832 5957;5958 13426;13427;13428;13429;13430;13431;13432;13433 12268;12269;12270;12271;12272;12273 12270 1504;1505;1506 6 SHSQASLAGPGPVDPSNR YWNGKLLRSHSQASLA GPVDPSNRSNSMLELA R S H N R S 2 1 1 1 0 1 0 2 1 0 1 0 0 0 3 4 0 0 0 1 0 0 18 0 1775.8551 A6PVU7;Q9P2M7;A2A3M4 A6PVU7 135 152 CGN Cingulin yes no 2;3 1.1923E-06 103.75 By MS/MS By MS/MS 2 2 27350000 13609000 13741000 5341 426 5959 13434;13435;13436;13437 12274;12275;12276;12277 12275 802;803 4 SHSSPSLNPDTSPITAK SEAAGLKKSHSSPSLN DTSPITAKVKRNVSER K S H A K V 1 0 1 1 0 0 0 0 1 1 1 1 0 0 3 5 2 0 0 0 0 0 17 0 1737.8533 A0A087X1Z0;A0A087WXD8;B4DKF8;E5RJ29;Q9NYI0 A0A087X1Z0 230 246 PSD3 PH and SEC7 domain-containing protein 3 yes no 2 3.8402E-05 87.088 By MS/MS By MS/MS 2 2 19782000 10482000 9300500 5342 85 5960;5961 13438;13439;13440;13441 12278;12279 12279 160 2 SHSSPSQIPK LQDSEKKRSHSSPSQI SSPSQIPKKILRYVK_ R S H P K K 0 0 0 0 0 1 0 0 1 1 0 1 0 0 2 4 0 0 0 0 0 0 10 0 1066.5407 H0YN99;Q9H792 H0YN99 1033 1042 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.0067269 89.698 By MS/MS 1 0 0 0 5343 1102 5962 13442 12280 12280 2027 1 SHSVPENMVEPPLSGR PRGPPVNRSHSVPENM VEPPLSGRVGRCRSLS R S H G R V 0 1 1 0 0 0 2 1 1 0 1 0 1 0 3 3 0 0 0 2 0 0 16 0 1734.8359 A1L390;G3V311 A1L390 1079 1094 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.024561 51.591 By matching By MS/MS 1 1 6647000 3990900 2656100 5344 391 5963 13443;13444 12281 12281 1 SHSVSAVDGLEDKLDNFKK SLKRGLPRSHSVSAVD DKLDNFKKNKGYHKLL R S H K K N 1 0 1 3 0 0 1 1 1 0 2 3 0 1 0 3 0 0 0 2 0 0 19 2 2088.0487 Q7Z2Z1 Q7Z2Z1 936 954 TICRR Treslin yes yes 4 0.0015453 60.454 By MS/MS 1 1515100 0 1515100 5345 2207 5964 13445 12282 12282 4401 1 SHSWVNSAYAPGGSK LASKGIDRSHSWVNSA AYAPGGSKAVLRRAPP R S H S K A 2 0 1 0 0 0 0 2 1 0 0 1 0 0 1 4 0 1 1 1 0 0 15 0 1546.7165 K7ESB7;K7EKT0 K7ESB7 165 179 DOCK6 yes no 3 0.011397 53.395 By MS/MS By matching 1 1 3947000 2393800 1553200 5346 1291 5965 13446;13447 12283 12283 2322 1 SHTPSPTSPK GQTQSPTKSHTPSPTS TPSPTSPKSYPSQKHA K S H P K S 0 0 0 0 0 0 0 0 1 0 0 1 0 0 3 3 2 0 0 0 0 0 10 0 1037.5142 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123 B7Z385 193 202 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 yes no 2 2.5473E-06 115.91 By MS/MS By MS/MS 2 1 8172200 4209800 3962400 5347 105 5966 13448;13449;13450 12284;12285;12286 12286 198 0 SHVARTLSLNEKQK S H Q K 1 1 1 0 0 1 1 0 1 0 2 2 0 0 0 2 1 0 0 1 0 0 14 2 1609.89 REV__S4R3B4 yes no 3 0.019313 54.343 By MS/MS 1 16286000 0 16286000 + 5348 2969 5967 13451 12287 12287 6155 1 SHVEDGDIAGAPASSPEAPPAEQDPVQLK RQQLSEMKSHVEDGDI EQDPVQLKTQLEWTEA K S H L K T 5 0 0 3 0 2 3 2 1 1 1 1 0 0 5 3 0 0 0 2 0 0 29 0 2911.3836 A0A087WU26;F8W7S5;A0A087WVV2;A0A0A0MRV0;Q9P2E9 A0A087WU26 200 228 RRBP1 Ribosome-binding protein 1 yes no 3 0.010353 44.712 By matching By MS/MS 1 1 18364000 8133000 10231000 5349 39 5968 13452;13453 12288 12288 69 1 SHVSADSNRGYSR ________________ DSNRGYSRGGRKVPNL - S H S R G 1 2 1 1 0 0 0 1 1 0 0 0 0 0 0 4 0 0 1 1 0 0 13 1 1434.66 H0YJY0 H0YJY0 1 13 FOXN3 yes yes 2 0.029836 49.35 By matching By MS/MS 1 1 5476900 3429700 2047100 5350 1084 5969 13454;13455 12289 12289 7449 0 SHVTEEEEEEEEEESDS TTLELSTKSHVTEEEE EEEEESDS________ K S H D S - 0 0 0 1 0 0 10 0 1 0 0 0 0 0 0 3 1 0 0 1 0 0 17 0 2021.7345 O75971 O75971 82 98 SNAPC5 snRNA-activating protein complex subunit 5 yes yes 2 0.0090697 70.942 By MS/MS 1 0 0 0 5351 1452 5970 13456 12290 12290 2687 1 SHWDDSTSDSELEK PSPKESGRSHWDDSTS TSDSELEKGAREQPEK R S H E K G 0 0 0 3 0 0 2 0 1 0 1 1 0 0 0 4 1 1 0 0 0 0 14 0 1634.6696 E9PGC8;P78559 E9PGC8 2337 2350 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.0042551 91.812 By MS/MS By MS/MS 1 1 7828400 4345500 3482900 5352 791 5971 13457;13458 12291;12292 12291 1420;1421;6440 2 SHYADVDPENQNFLLESNLGK PTKQAALKSHYADVDP LLESNLGKKKYETEFN K S H G K K 1 0 3 2 0 1 2 1 1 0 3 1 0 1 1 2 0 0 1 1 0 0 21 0 2389.1186 F8VUY8;Q96QD8 F8VUY8 39 59 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 2;3 2.3428E-58 168 By MS/MS By MS/MS 2 2 176600000 79189000 97414000 5353 919 5972 13459;13460;13461;13462 12293;12294;12295;12296;12297;12298 12298 1652;7412 6 SHYADVDPENQNFLLESNLGKK PTKQAALKSHYADVDP LESNLGKKKYETEFNS K S H K K K 1 0 3 2 0 1 2 1 1 0 3 2 0 1 1 2 0 0 1 1 0 0 22 1 2517.2136 F8VUY8;Q96QD8 F8VUY8 39 60 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 3 3.7133E-59 166.21 By MS/MS By MS/MS 1 1 99860000 50403000 49457000 5354 919 5973 13463;13464 12299;12300 12300 1652;7412 2 SIDDEDVDENEDDVYGNSSGRK GYQKLDVKSIDDEDVD YGNSSGRKHRGHSESP K S I R K H 0 1 2 6 0 0 3 2 0 1 0 1 0 0 0 3 0 0 1 2 0 0 22 1 2457.0052 Q8IUI4;Q8TEQ0 Q8IUI4 191 212 SNX29P2;SNX29 Putative protein SNX29P2;Sorting nexin-29 yes no 3 0.00054219 62.002 By MS/MS By MS/MS 1 1 9934700 5352600 4582100 5355 2261 5974 13465;13466 12301;12302 12302 4539;7781 2 SIDDEITEAKSGTATPQR RTYLLDFRSIDDEITE SGTATPQRSGSVSNYR R S I Q R S 2 1 0 2 0 1 2 1 0 2 0 1 0 0 1 2 3 0 0 0 0 0 18 1 1917.928 Q13131 Q13131 476 493 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 2 2.1572E-05 87.831 By matching By MS/MS 1 1 24542000 12200000 12342000 5356 1898 5975 13467;13468 12303 12303 6786;6787 1 SIEEAMNEIR VANKRDTRSIEEAMNE EEAMNEIRAKKRLRQS R S I I R A 1 1 1 0 0 0 3 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 10 0 1190.5601 I3L0X5;O75391 I3L0X5 151 160 SPAG7 Sperm-associated antigen 7 yes no 2 0.0025744 87.184 By MS/MS 1 2040700 2040700 0 5357 1197 5976 13469 12304 12304 2178 1 SIEEGDGAFGR GDSCFYQRSIEEGDGA EGDGAFGRSPREIQRS R S I G R S 1 1 0 1 0 0 2 3 0 1 0 0 0 1 0 1 0 0 0 0 0 0 11 0 1136.5098 O75420 O75420 137 147 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 2 0.0023565 90.434 By matching By MS/MS 1 1 16581000 8991100 7589600 5358 1439 5977 13470;13471 12305 12305 2655 1 SIEVENDFLPVEK KPIKLRPRSIEVENDF NDFLPVEKTIGKKLPA R S I E K T 0 0 1 1 0 0 3 0 0 1 1 1 0 1 1 1 0 0 0 2 0 0 13 0 1517.7613 Q5JPT1;Q5VSN0;Q5JPT2;Q96B97 Q5JPT1 177 189 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes no 2 4.8779E-79 210.07 By MS/MS By MS/MS 1 1 99001000 57909000 41092000 5359 2070 5978 13472;13473 12306;12307 12306 4063 2 SIEVIENR EAVAQFSKSIEVIENR SIEVIENRMAVLNEQV K S I N R M 0 1 1 0 0 0 2 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 8 0 958.50836 P49321;H0YDS9;E9PRH9;H0YF33;Q5T624 P49321 610 617 NASP Nuclear autoantigenic sperm protein yes no 2 0.018952 87.323 By MS/MS By MS/MS 1 1 2971500 1702300 1269200 5360 1723 5979 13474;13475 12308;12309 12308 2 SIFASPESVTGK NKKGQVKRSIFASPES SPESVTGKVGVGTCGI R S I G K V 1 0 0 0 0 0 1 1 0 1 0 1 0 1 1 3 1 0 0 1 0 0 12 0 1221.6241 O75940 O75940 197 208 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 2 0.0038534 79.089 By MS/MS By MS/MS 1 1 7221800 4070000 3151900 5361 1451 5980 13476;13477 12310;12311;12312 12310 2686 3 SIGASPNPFSVHTATAVPSGK VMILKKKRSIGASPNP ATAVPSGKIASPVSRK R S I G K I 3 0 1 0 0 0 0 2 1 1 0 1 0 1 3 4 2 0 0 2 0 0 21 0 2024.0327 A0A087WU64;A6NMQ1;P09884 A0A087WU64 186 206 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit yes no 2;3 2.0967E-08 87.652 By MS/MS By MS/MS 2 2 119590000 64389000 55199000 5362 41 5981 13478;13479;13480;13481 12313;12314;12315;12316 12314 71 4 SIGSAVDQGNESIVAK PGPVKKTRSIGSAVDQ GNESIVAKTTVTVPND R S I A K T 2 0 1 1 0 1 1 2 0 2 0 1 0 0 0 3 0 0 0 2 0 0 16 0 1573.7948 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 203 218 RACGAP1 Rac GTPase-activating protein 1 yes no 2 1.3007E-23 150.12 By MS/MS By MS/MS 2 2 119090000 67123000 51972000 5363 2628 5982;5983 13482;13483;13484;13485 12317;12318;12319;12320 12317 5345;5346 4 SIGSPESTPK DSDNISLKSIGSPEST GSPESTPKNQASHPTA K S I P K N 0 0 0 0 0 0 1 1 0 1 0 1 0 0 2 3 1 0 0 0 0 0 10 0 1001.5029 A0A0A0MRJ3;Q8NEY1;H0Y6F6 Q8NEY1 770 779 NAV1 Neuron navigator 1 no no 2 0.025101 60.255 By MS/MS 1 4512100 4512100 0 5364 188;2350 5984 13486 12321 12321 0 SIITCRVSLLDGTDVSVDLPK IPAAGDSKSIITCRVS DVSVDLPKKAKGQELF K S I P K K 0 1 0 3 1 0 0 1 0 2 3 1 0 0 1 3 2 0 0 3 0 0 21 1 2287.2093 Q9HCM4 Q9HCM4 41 61 EPB41L5 Band 4.1-like protein 5 yes yes 3 0.022038 44.382 By MS/MS 1 9426900 9426900 0 5365 2695 5985 13487 12322 12322 1 SIKSDVPVYLK ERTEEDSKSIKSDVPV SDVPVYLKRLKGNKHD K S I L K R 0 0 0 1 0 0 0 0 0 1 1 2 0 0 1 2 0 0 1 2 0 0 11 1 1247.7125 H0Y2V6;Q5SW79 H0Y2V6 258 268 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0018581 98 By MS/MS By MS/MS 1 1 3647100 2129800 1517300 5366 1006 5986 13488;13489 12323;12324 12323 1851 2 SIKSDVPVYLKR ERTEEDSKSIKSDVPV DVPVYLKRLKGNKHDD K S I K R L 0 1 0 1 0 0 0 0 0 1 1 2 0 0 1 2 0 0 1 2 0 0 12 2 1403.8136 H0Y2V6;Q5SW79 H0Y2V6 258 269 CEP170 Centrosomal protein of 170 kDa yes no 3 0.0037858 72.315 By MS/MS 1 0 0 0 5367 1006 5987 13490 12325 12325 1851 1 SILAKPSSSPDPR LTSVMVPKSILAKPSS PSSSPDPRYLSVPPSP K S I P R Y 1 1 0 1 0 0 0 0 0 1 1 1 0 0 3 4 0 0 0 0 0 0 13 1 1353.7252 Q9BTC0 Q9BTC0 1011 1023 DIDO1 Death-inducer obliterator 1 yes yes 2;3 0.0014927 104.09 By MS/MS By MS/MS 2 2 53527000 27548000 25979000 5368 2576 5988 13491;13492;13493;13494 12326;12327;12328;12329 12326 5206 4 SILPYPVSPK GRTKSSYKSILPYPVS LPYPVSPKQKYSHVIL K S I P K Q 0 0 0 0 0 0 0 0 0 1 1 1 0 0 3 2 0 0 1 1 0 0 10 0 1099.6277 Q8IWI9;H3BP52;H3BTF4 Q8IWI9 917 926 MGA MAX gene-associated protein yes no 2 0.00012413 115.92 By MS/MS By MS/MS 1 1 12791000 7037300 5753200 5369 2268 5989 13495;13496 12330;12331;12332;12333;12334;12335 12332 4551 6 SILSPGGSCGPIK VMVTDADRSILSPGGS GGSCGPIKVKTEPTED R S I I K V 0 0 0 0 1 0 0 3 0 2 1 1 0 0 2 3 0 0 0 0 0 0 13 0 1271.6544 P78347 P78347 207 219 GTF2I General transcription factor II-I yes yes 2 0.0023317 85.536 By MS/MS By MS/MS 1 2 114060000 63327000 50732000 5370 1815 5990 13497;13498;13499 12336;12337 12337 3387 2 SILSPGGSCGPIKVK VMVTDADRSILSPGGS SCGPIKVKTEPTEDSG R S I V K T 0 0 0 0 1 0 0 3 0 2 1 2 0 0 2 3 0 0 0 1 0 0 15 1 1498.8177 P78347 P78347 207 221 GTF2I General transcription factor II-I yes yes 2;3 0.0004439 96.673 By MS/MS By MS/MS 1 2 18721000 8405000 10316000 5371 1815 5991 13500;13501;13502 12338;12339;12340;12341 12338 3387 4 SILVSPTGPSR AEFKKTDKSILVSPTG VSPTGPSRVAFDPEQK K S I S R V 0 1 0 0 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1112.619 Q14684 Q14684 702 712 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.004271 78.964 By MS/MS By MS/MS 1 1 139550000 78633000 60916000 5372 1955 5992 13503;13504 12342;12343 12342 3791;3792 2 SIMVQSPEK SGSNISKKSIMVQSPE IMVQSPEKAYSSSQPV K S I E K A 0 0 0 0 0 1 1 0 0 1 0 1 1 0 1 2 0 0 0 1 0 0 9 0 1017.5165 Q14191 Q14191 1128 1136 WRN Werner syndrome ATP-dependent helicase yes yes 2 0.0036172 97.163 By MS/MS By matching 1 1 4658200 2323500 2334700 5373 1943 5993 13505;13506 12344 12344 3749 1 SIPLECPLSSPK ALTGGEAKSIPLECPL ECPLSSPKGVLFSSKS K S I P K G 0 0 0 0 1 0 1 0 0 1 2 1 0 0 3 3 0 0 0 0 0 0 12 0 1326.6853 Q92667;I3L2A2;I3L2N7 Q92667 142 153 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 9.0422E-09 137.62 By MS/MS By MS/MS 1 1 102620000 60590000 42031000 5374 2431 5994 13507;13508 12345;12346 12345 4893;4894 2 SIPLECPLSSPKGVLFSSK ALTGGEAKSIPLECPL KGVLFSSKSAEVCKQD K S I S K S 0 0 0 0 1 0 1 1 0 1 3 2 0 1 3 5 0 0 0 1 0 0 19 1 2045.0867 Q92667;I3L2A2;I3L2N7 Q92667 142 160 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2;3 0.0023901 62.203 By MS/MS By MS/MS 2 2 42883000 22314000 20569000 5375 2431 5995 13509;13510;13511;13512 12347;12348;12349 12349 4893;4894 3 SIQADGLVWGSSK AKLEECVRSIQADGLV GLVWGSSKLVPVGYGI R S I S K L 1 0 0 1 0 1 0 2 0 1 1 1 0 0 0 3 0 1 0 1 0 0 13 0 1346.683 P24534 P24534 164 176 EEF1B2 Elongation factor 1-beta yes yes 2 0.0030657 90.685 By MS/MS By matching 1 1 3007700 2142800 864880 5376 1626 5996 13513;13514 12350 12350 1 SIQDLTVTGTEPGQVSSR GNGQPRRRSIQDLTVT EPGQVSSRSSSPSVRM R S I S R S 0 1 0 1 0 2 1 2 0 1 1 0 0 0 1 3 3 0 0 2 0 0 18 0 1873.9381 Q9UG54;O43318 Q9UG54 93 110 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 2;3 3.6997E-68 189.56 By MS/MS By MS/MS 2 2 133990000 79789000 54196000 5377 1379 5997 13515;13516;13517;13518 12351;12352;12353;12354 12351 2525;6609 4 SIQFVDWCPTGFK IATIKTKRSIQFVDWC DWCPTGFKVGINYQPP R S I F K V 0 0 0 1 1 1 0 1 0 1 0 1 0 2 1 1 1 1 0 1 0 0 13 0 1583.7442 P68363;P68366 P68363 340 352 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain yes no 2 0.0011903 103.66 By matching By MS/MS 1 1 20426000 13524000 6902500 5378 1810 5998 13519;13520 12355 12355 3380 1 SIRDTPAKNAQK EEKAPVKKSIRDTPAK TPAKNAQKSNQNGKDS K S I Q K S 2 1 1 1 0 1 0 0 0 1 0 2 0 0 1 1 1 0 0 0 0 0 12 2 1327.7208 P06748 P06748 195 206 NPM1 Nucleophosmin yes yes 3 0.014754 84.046 By MS/MS By matching 1 1 122090000 61955000 60139000 5379 1533 5999 13521;13522 12356 12356 1 SISADDDLQESSR PTFQPFQRSISADDDL DDLQESSRRPQRKSLY R S I S R R 1 1 0 3 0 1 1 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0 13 0 1421.627 P18615;A0A0A0MT02;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 113 125 NELFE Negative elongation factor E yes no 2 9.1096E-29 174.94 By MS/MS By MS/MS 1 1 390620000 186030000 204590000 5380 1601 6000 13523;13524 12357;12358 12358 2950 2 SISADDDLQESSRRPQR PTFQPFQRSISADDDL ESSRRPQRKSLYESFV R S I Q R K 1 3 0 3 0 2 1 0 0 1 1 0 0 0 1 4 0 0 0 0 0 0 17 2 1958.9406 P18615;A0A0A0MT02;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 113 129 NELFE Negative elongation factor E yes no 3 0.023445 48.376 By matching By MS/MS 1 1 93348000 55018000 38330000 5381 1601 6001 13525;13526 12359 12359 2950 1 SISADSFDQR KGKGKRERSISADSFD SADSFDQRDPGTPNDD R S I Q R D 1 1 0 2 0 1 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 10 0 1124.5098 O00512 O00512 102 111 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 0.00022933 111.52 By MS/MS By MS/MS 1 1 10373000 6059700 4313600 5382 1335 6002 13527;13528 12360;12361 12361 2406 2 SISASKASPPGDLQNPK TQSLHSLRSISASKAS PGDLQNPKRARQDPT_ R S I P K R 2 0 1 1 0 1 0 1 0 1 1 2 0 0 3 4 0 0 0 0 0 0 17 1 1695.8792 O00273 O00273 308 324 DFFA DNA fragmentation factor subunit alpha yes yes 2;3 7.9668E-46 177.36 By MS/MS By MS/MS 2 2 90232000 51052000 39180000 5383 1329 6003 13529;13530;13531;13532 12362;12363;12364;12365;12366;12367;12368 12366 2398 7 SISASKASPPGDLQNPKR TQSLHSLRSISASKAS GDLQNPKRARQDPT__ R S I K R A 2 1 1 1 0 1 0 1 0 1 1 2 0 0 3 4 0 0 0 0 0 0 18 2 1851.9803 O00273 O00273 308 325 DFFA DNA fragmentation factor subunit alpha yes yes 3 6.4737E-05 83.082 By MS/MS By MS/MS 1 1 30970000 16116000 14853000 5384 1329 6004 13533;13534 12369;12370 12370 2398 2 SISCEEATCSDTSESILEEEPQENQKK DDRRGVLRSISCEEAT EPQENQKKLLPLSVTP R S I K K L 1 0 1 1 2 2 7 0 0 2 1 2 0 0 1 5 2 0 0 0 0 0 27 1 3127.3445 O94763;I3L280 O94763 440 466 URI1 Unconventional prefoldin RPB5 interactor 1 yes no 3 1.5417E-08 83.602 By matching By MS/MS 1 1 36084000 17288000 18796000 5385 1459 6005 13535;13536 12371 12371 2697 1 SISGASSGLSTSPLSSPR AQHGQRSRSISGASSG TSPLSSPRVTPHPSPR R S I P R V 1 1 0 0 0 0 0 2 0 1 2 0 0 0 2 8 1 0 0 0 0 0 18 0 1689.8533 Q8IWQ3 Q8IWQ3 412 429 BRSK2 Serine/threonine-protein kinase BRSK2 yes yes 2 1.1065E-05 103.87 By MS/MS By MS/MS 2 1 14912000 9142200 5769600 5386 2270 6006 13537;13538;13539 12372;12373;12374 12373 4558;4559;4560;6948 3 SISGTPAETPACK AAQSGLTRSISGTPAE PAETPACKSASETKVI R S I C K S 2 0 0 0 1 0 1 1 0 1 0 1 0 0 2 2 2 0 0 0 0 0 13 0 1317.6235 F8VWT9;J3KPF0;Q9Y4D8 F8VWT9 1361 1373 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes no 2 2.6139E-17 164.48 By MS/MS By MS/MS 1 1 19687000 9647900 10039000 5387 923 6007 13540;13541 12375;12376 12375 1657 2 SISLGDSEGPIVATLAQPLR SSRARISRSISLGDSE ATLAQPLRRPSSVGEL R S I L R R 2 1 0 1 0 1 1 2 0 2 3 0 0 0 2 3 1 0 0 1 0 0 20 0 2023.095 O43379 O43379 1226 1245 WDR62 WD repeat-containing protein 62 yes yes 2 9.7216E-09 99.021 By MS/MS By MS/MS 1 1 7720200 5391000 2329200 5388 1381 6008 13542;13543 12377;12378;12379 12377 2528 3 SISLKLDSEE TLARGKARSISLKLDS SLKLDSEE________ R S I E E - 0 0 0 1 0 0 2 0 0 1 2 1 0 0 0 3 0 0 0 0 0 0 10 1 1119.5659 O00562 O00562 1235 1244 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 yes yes 2 0.010657 73.435 By MS/MS 1 2085400 2085400 0 5389 1336 6009 13544 12380 12380 2407 1 SISLSQSAENVPASK GFEFFRNRSISLSQSA AENVPASKFSLQKTLS R S I S K F 2 0 1 0 0 1 1 0 0 1 1 1 0 0 1 5 0 0 0 1 0 0 15 0 1516.7733 H0YFN7;Q4ADV7 H0YFN7 907 921 RIC1 RAB6A-GEF complex partner protein 1 yes no 2 1.3514E-28 160.93 By matching By MS/MS 1 1 23199000 12516000 10683000 5390 1070 6010 13545;13546 12381 12381 1973;1974 1 SISLSQSAENVPASKFSLQK GFEFFRNRSISLSQSA ASKFSLQKTLSMPSGP R S I Q K T 2 0 1 0 0 2 1 0 0 1 2 2 0 1 1 6 0 0 0 1 0 0 20 1 2120.1113 H0YFN7;Q4ADV7 H0YFN7 907 926 RIC1 RAB6A-GEF complex partner protein 1 yes no 3 0.0053603 53.96 By matching By MS/MS 1 1 6616800 3031200 3585600 5391 1070 6011 13547;13548 12382 12382 1973;1974 1 SISLYYTGEK QGTEIDGRSISLYYTG SLYYTGEKGQNQDYRG R S I E K G 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P19338;H7BY16 P19338 458 467 NCL Nucleolin yes no 2 0.014231 99.802 By MS/MS By MS/MS 1 1 1037300 0 1037300 5392 1604 6012 13549;13550 12383;12384 12383 2 SISNEGLTLNNSHVSK TPNRGITRSISNEGLT LNNSHVSKHIRKNLSF R S I S K H 0 0 3 0 0 0 1 1 1 1 2 1 0 0 0 4 1 0 0 1 0 0 16 0 1698.8537 Q08AD1 Q08AD1 462 477 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2;3 3.0931E-247 268.08 By MS/MS By MS/MS 2 2 202380000 117610000 84774000 5393 1868 6013 13551;13552;13553;13554 12385;12386;12387;12388 12385 3521 4 SISNPPGSNLR FNISNLQKSISNPPGS NPPGSNLRTT______ K S I L R T 0 1 2 0 0 0 0 1 0 1 1 0 0 0 2 3 0 0 0 0 0 0 11 0 1140.5887 F5GWT4;Q9H4A3 F5GWT4 2122 2132 WNK1 Serine/threonine-protein kinase WNK1 yes no 2 0.0076752 72.731 By MS/MS By MS/MS 1 1 21999000 11834000 10165000 5394 859 6014 13555;13556 12389;12390 12389 1548 2 SISNPPGSNLRTT FNISNLQKSISNPPGS PGSNLRTT________ K S I T T - 0 1 2 0 0 0 0 1 0 1 1 0 0 0 2 3 2 0 0 0 0 0 13 1 1342.6841 F5GWT4;Q9H4A3 F5GWT4 2122 2134 WNK1 Serine/threonine-protein kinase WNK1 yes no 2 0.015024 64.224 By matching By MS/MS 1 1 5156200 2705200 2451000 5395 859 6015 13557;13558 12391 12391 1548 1 SISPSALQDLLR MPSVQPPRSISPSALQ SALQDLLRTLKSPSSP R S I L R T 1 1 0 1 0 1 0 0 0 1 3 0 0 0 1 3 0 0 0 0 0 0 12 0 1298.7194 Q92793 Q92793 2061 2072 CREBBP CREB-binding protein yes yes 2 8.1209E-09 135.94 By MS/MS By MS/MS 1 1 31769000 18004000 13766000 5396 2437 6016 13559;13560 12392;12393 12392 4904 2 SISSPSVSSETMDKPVDLSTR EEPDSITKSISSPSVS KPVDLSTRKEIDTDST K S I T R K 0 1 0 2 0 0 1 0 0 1 1 1 1 0 2 7 2 0 0 2 0 0 21 1 2222.0736 P49792 P49792 2802 2822 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 3 0.0001303 74.953 By MS/MS By MS/MS 1 1 12511000 6741100 5770100 5397 1730 6017 13561;13562 12394;12395 12394 3266 2 SISTSGPLDKEDTGR CPIFPMARSISTSGPL LDKEDTGRQKLISTGS R S I G R Q 0 1 0 2 0 0 1 2 0 1 1 1 0 0 1 3 2 0 0 0 0 0 15 1 1561.7584 A0A0U1RR27;Q7Z401 A0A0U1RR27 1631 1645 DENND4A C-myc promoter-binding protein yes no 2 0.00048205 92.38 By MS/MS By MS/MS 1 1 27388000 14160000 13228000 5398 347 6018 13563;13564 12396;12397 12397 639;640;6311 2 SISTSGPLDKEDTGRQK CPIFPMARSISTSGPL KEDTGRQKLISTGSLP R S I Q K L 0 1 0 2 0 1 1 2 0 1 1 2 0 0 1 3 2 0 0 0 0 0 17 2 1817.9119 A0A0U1RR27;Q7Z401 A0A0U1RR27 1631 1647 DENND4A C-myc promoter-binding protein yes no 3 2.5677E-05 89.604 By MS/MS By MS/MS 1 1 14561000 7531800 7029400 5399 347 6019 13565;13566 12398;12399;12400 12398 639;640;6311 3 SISVSEHVVR AAEAFRCRSISVSEHV SVSEHVVRSRIQTSLT R S I V R S 0 1 0 0 0 0 1 0 1 1 0 0 0 0 0 3 0 0 0 3 0 0 10 0 1111.5986 P49815 P49815 979 988 TSC2 Tuberin yes yes 2 0.0017754 95.618 By MS/MS By matching 1 1 7161000 3862200 3298800 5400 1731 6020 13567;13568 12401 12401 3269 1 SITSPPSTSTTK NQVTLGRRSITSPPST PPSTSTTKRPKSIDDS R S I T K R 0 0 0 0 0 0 0 0 0 1 0 1 0 0 2 4 4 0 0 0 0 0 12 0 1205.6139 C9JWJ8;K7EN08;Q14938 C9JWJ8 268 279 NFIX Nuclear factor 1;Nuclear factor 1 X-type yes no 2 0.019125 61.235 By matching By MS/MS 1 1 7406300 3990900 3415400 5401 613 6021 13569;13570 12402 12402 1121 1 SITSPTTLYDR ADTGGLGRSITSPTTL SPTTLYDRYSSPPAST R S I D R Y 0 1 0 1 0 0 0 0 0 1 1 0 0 0 1 2 3 0 1 0 0 0 11 0 1252.6299 Q08999;F5H837 Q08999 659 669 RBL2 Retinoblastoma-like protein 2 yes no 2 0.0011156 101.32 By MS/MS By MS/MS 1 1 12177000 7061500 5115200 5402 1867 6022 13571;13572 12403;12404 12403 3514 2 SIVAVEPR PRRRGRKKSIVAVEPR SIVAVEPRSLIQGAFQ K S I P R S 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 2 0 0 8 0 869.49707 Q5VZL5;H7C1I7 Q5VZL5 1181 1188 ZMYM4 Zinc finger MYM-type protein 4 yes no 2 0.007811 94.409 By MS/MS By MS/MS 1 1 28720000 12928000 15792000 5403 2125 6023 13573;13574 12405;12406 12406 4227 2 SIVPSSPQPQR SSLCRSRRSIVPSSPQ PSSPQPQRAQLAPHAP R S I Q R A 0 1 0 0 0 2 0 0 0 1 0 0 0 0 3 3 0 0 0 1 0 0 11 0 1194.6357 H7C5C6;H7C5K2;H7C5A5;H0Y860;Q9P246 H7C5C6 120 130 STIM2 Stromal interaction molecule 2 yes no 2 0.0027212 88.187 By MS/MS By MS/MS 1 1 21990000 11796000 10194000 5404 1038 6024 13575;13576 12407;12408 12408 1927 2 SIYDDISSPGLGSTPLTSR KSGAPPVRSIYDDISS GSTPLTSRRQPNISVM R S I S R R 0 1 0 2 0 0 0 2 0 2 2 0 0 0 2 5 2 0 1 0 0 0 19 0 1964.9691 Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5 93 111 NUP35 Nucleoporin NUP53 yes no 2 0.0035587 62.162 By MS/MS By matching 1 1 4577800 2469300 2108500 5405 2354 6025 13577;13578 12409 12409 4723;4724 1 SIYGEKFEDENFILK RHNGTGGKSIYGEKFE EDENFILKHTGPGILS K S I L K H 0 0 1 1 0 0 3 1 0 2 1 2 0 2 0 1 0 0 1 0 0 0 15 1 1830.904 P62937;F8WE65;C9J5S7 P62937 77 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 3 0.0047825 96.464 By MS/MS By matching 1 1 16523000 6433800 10089000 5406 1806 6026 13579;13580 12410 12410 1 SIYYITGESK SRMKETQKSIYYITGE YYITGESKEQVANSAF K S I S K E 0 0 0 0 0 0 1 1 0 2 0 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P08238;Q58FF8 P08238 482 491 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 0.013445 73.985 By MS/MS By MS/MS 1 1 4502400 2100900 2401600 5407 1542 6027 13581;13582 12411;12412 12412 1 SKDEEEDEESDDADDTPILKPVSLLR CQSSSKRKSKDEEEDE LKPVSLLRKRDVKNSP K S K L R K 1 1 0 6 0 0 5 0 0 1 3 2 0 0 2 3 1 0 0 1 0 0 26 2 2944.3673 Q92794;C9K0F9 Q92794 1104 1129 KAT6A Histone acetyltransferase KAT6A;Histone acetyltransferase yes no 3 0.0024035 54.261 By MS/MS By matching 1 1 30858000 16312000 14546000 5408 2438 6028 13583;13584 12413 12413 4908 1 SKDHFGLEGDEESTMLEDSVSPK DIILKKKKSKDHFGLE LEDSVSPKKSTVLQQQ K S K P K K 0 0 0 3 0 0 4 2 1 0 2 2 1 1 1 4 1 0 0 1 0 0 23 1 2536.1275 Q9Y490 Q9Y490 405 427 TLN1 Talin-1 yes yes 3 0.00049964 66.467 By matching By MS/MS 1 2 20481000 6688200 13793000 5409 2917 6029;6030 13585;13586;13587 12414;12415 12415 383 6068;6069 2 SKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQEPK SKGETGKRSKEGHSLE QQSPQEPKSLNWSSFV R S K P K S 1 0 4 4 0 3 7 2 1 0 3 3 1 1 2 5 0 0 0 1 0 0 38 2 4273.8829 F8VS07;F8VQE1;Q9UHB6 F8VS07 363 400 LIMA1 LIM domain and actin-binding protein 1 yes no 4 2.1218E-06 58.943 By MS/MS By matching 1 1 48474000 35456000 13019000 5410 911 6031 13588;13589 12416 12416 1634;1635;1638 1 SKESGWVENEIYGY FSPDQMGRSKESGWVE VENEIYGY________ R S K G Y - 0 0 1 0 0 0 3 2 0 1 0 1 0 0 0 2 0 1 2 1 0 0 14 1 1659.7417 Q6UX15 Q6UX15 369 382 LAYN Layilin yes yes 2 0.0012411 84.687 By matching By MS/MS 1 1 8859400 4751100 4108300 5411 2171 6032 13590;13591 12417 12417 7759 1 SKESVPEFPLSPPK FELILSPRSKESVPEF EFPLSPPKKKDLSLEE R S K P K K 0 0 0 0 0 0 2 0 0 0 1 2 0 1 4 3 0 0 0 1 0 0 14 1 1540.8137 A2A2D0;P16949 A2A2D0 28 41 STMN1 Stathmin yes no 2;3 4.1364E-36 181.51 By MS/MS By MS/MS 2 3 67459000 39873000 27586000 5412 393 6033 13592;13593;13594;13595;13596 12418;12419;12420;12421;12422;12423;12424;12425;12426;12427;12428 12422 754;756 11 SKFDSDEEEEDTENVEAASSGK DGPRLPQRSKFDSDEE VEAASSGKVTRSPSPV R S K G K V 2 0 1 3 0 0 6 1 0 0 0 2 0 1 0 4 1 0 0 1 0 0 22 1 2401.9881 Q8TF01 Q8TF01 286 307 PNISR Arginine/serine-rich protein PNISR yes yes 2;3 6.7051E-10 99.641 By MS/MS By MS/MS 2 2 125700000 72473000 53227000 5413 2393 6034 13597;13598;13599;13600 12429;12430;12431;12432 12430 4785;4786;6972 4 SKKGGEFDEFVNDDTDDDLPISK RGGGGGRRSKKGGEFD DDDLPISKKKKRRKGS R S K S K K 0 0 1 6 0 0 2 2 0 1 1 3 0 2 1 2 1 0 0 1 0 0 23 2 2570.166 Q6PD62 Q6PD62 911 933 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 3;4 3.8769E-15 110.62 By MS/MS By MS/MS 2 2 58039000 30256000 27783000 5414 2159 6035 13601;13602;13603;13604 12433;12434;12435;12436 12435 6906 4 SKLNLAQFLNEDLS AKTAALEKSKLNLAQF QFLNEDLS________ K S K L S - 1 0 2 1 0 1 1 0 0 0 4 1 0 1 0 2 0 0 0 0 0 0 14 1 1590.8253 Q9BPX3 Q9BPX3 1002 1015 NCAPG Condensin complex subunit 3 yes yes 2 1.3083E-35 179.97 By MS/MS By MS/MS 1 1 23907000 17830000 6076800 5415 2567 6036 13605;13606 12437;12438 12437 5182 2 SKLSPSPSLR EVSPEVVRSKLSPSPS LSPSPSLRKSSKSPKR R S K L R K 0 1 0 0 0 0 0 0 0 0 2 1 0 0 2 4 0 0 0 0 0 0 10 1 1070.6084 Q5T200;A0A087WX14 Q5T200 204 213 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.022885 78.814 By MS/MS 1 29639000 0 29639000 5416 2094 6037 13607 12439 12439 1 SKPDPEVGPLLGVQPLPGSPTADR HNEDLAKRSKPDPEVG PGSPTADRQSSSGGGP R S K D R Q 1 1 0 2 0 1 1 3 0 0 3 1 0 0 6 2 1 0 0 2 0 0 24 1 2426.2805 Q9H5J0 Q9H5J0 531 554 ZBTB3 Zinc finger and BTB domain-containing protein 3 yes yes 3 9.4855E-05 71.295 By matching By MS/MS 1 1 8425000 3605200 4819700 5417 2665 6038 13608;13609 12440 12440 5434 1 SKPIPIMPASPQK EELLAEEKSKPIPIMP IMPASPQKGHAVNLLD K S K Q K G 1 0 0 0 0 1 0 0 0 2 0 2 1 0 4 2 0 0 0 0 0 0 13 1 1392.7799 G8JLD5;O00429 G8JLD5 583 595 DNM1L Dynamin-1-like protein yes no 2;3 8.896E-11 144.4 By MS/MS By MS/MS 1 2 36039000 16607000 19432000 5418 1003 6039 13610;13611;13612 12441;12442;12443;12444 12441 1831 4 SKPIPIMPASPQKGHAVNLLDVPVPVAR EELLAEEKSKPIPIMP DVPVPVARKLSAREQR K S K A R K 3 1 1 1 0 1 0 1 1 2 2 2 1 0 6 2 0 0 0 4 0 0 28 2 2930.6528 G8JLD5;O00429 G8JLD5 583 610 DNM1L Dynamin-1-like protein yes no 4 0.00044694 56.588 By MS/MS By MS/MS 2 1 14070000 10041000 4029200 5419 1003 6040;6041 13613;13614;13615 12445;12446;12447 12446 116 1831 3 SKPLAASPKPAGLK PVKKSDGKSKPLAASP SPKPAGLKESSDKVSR K S K L K E 3 0 0 0 0 0 0 1 0 0 2 3 0 0 3 2 0 0 0 0 0 0 14 2 1363.8187 P46821 P46821 2265 2278 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.024666 51.535 By MS/MS By matching 1 1 6327400 3760200 2567200 5420 1712 6042 13616;13617 12448 12448 1 SKQSETVDQNSDSDEMLAILK PKPNKLPKSKQSETVD DEMLAILKEVSRMSHS K S K L K E 1 0 1 3 0 2 2 0 0 1 2 2 1 0 0 4 1 0 0 1 0 0 21 1 2337.1006 P46100;A0A096LNL9;A0A096LNW1 P46100 719 739 ATRX Transcriptional regulator ATRX yes no 3 0.022514 42.738 By MS/MS By matching 1 1 3928100 2265700 1662400 5421 1708 6043 13618;13619 12449 12449 3164 1 SKSDATASISLSSNLKR PSKRTHQRSKSDATAS SLSSNLKRTASNPKVE R S K K R T 2 1 1 1 0 0 0 0 0 1 2 2 0 0 0 6 1 0 0 0 0 0 17 2 1763.9377 A0A0B4J1S8;Q9UBF8 A0A0B4J1S8 287 303 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 2.4531E-08 119.72 By MS/MS By MS/MS 1 1 19134000 13020000 6114200 5422 257 6044 13620;13621 12450;12451 12450 468;6296 2 SKSDSYTLDPDTLR KLDPPRERSKSDSYTL TLDPDTLRKKKMPLTE R S K L R K 0 1 0 3 0 0 0 0 0 0 2 1 0 0 1 3 2 0 1 0 0 0 14 1 1596.7631 O75592 O75592 2831 2844 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2;3 5.5193E-12 131.56 By MS/MS By MS/MS 2 2 48111000 26464000 21647000 5423 1444 6045 13622;13623;13624;13625 12452;12453;12454;12455 12454 2671;2672;2673;6638 4 SKSEDMDNVQSK NEFSRRKRSKSEDMDN DMDNVQSKRRRYMEEE R S K S K R 0 0 1 2 0 1 1 0 0 0 0 2 1 0 0 3 0 0 0 1 0 0 12 1 1366.6035 Q6VMQ6 Q6VMQ6 557 568 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 2 9.2906E-09 136.33 By MS/MS By MS/MS 4 4 26667000 9966500 16700000 5424 2172 6046;6047 13626;13627;13628;13629;13630;13631;13632;13633 12456;12457;12458;12459;12460;12461;12462 12460 294 4338;4339 7 SKSEEAHAEDSVMDHHFR KKGFVLHKSKSEEAHA SVMDHHFRKPANDITS K S K F R K 2 1 0 2 0 0 3 0 3 0 0 1 1 1 0 3 0 0 0 1 0 0 18 1 2110.9127 Q8NC51 Q8NC51 328 345 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3;4;5 2.1119E-38 156.61 By MS/MS By MS/MS 5 5 1487500000 120750000 1366800000 5425 2335 6048;6049 13634;13635;13636;13637;13638;13639;13640;13641;13642;13643 12463;12464;12465;12466;12467;12468;12469;12470 12470 314 4677 8 SKSERPPTILMTEEPSSPK FLNLIKSRSKSERPPT TEEPSSPKGAVRSPPV R S K P K G 0 1 0 0 0 0 3 0 0 1 1 2 1 0 4 4 2 0 0 0 0 0 19 2 2113.0725 Q5VZK9;A0A0U1RQQ1 Q5VZK9 1078 1096 LRRC16A Leucine-rich repeat-containing protein 16A yes no 3 2.8863E-06 91.475 By MS/MS By MS/MS 1 1 10031000 5079100 4951800 5426 2124 6050 13644;13645 12471;12472 12472 4222;6895 2 SKSETGDSSIFR REKPLKRRSKSETGDS TGDSSIFRKLRNAKGE R S K F R K 0 1 0 1 0 0 1 1 0 1 0 1 0 1 0 4 1 0 0 0 0 0 12 1 1312.6259 O43166 O43166 286 297 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes yes 2 0.0020449 94.547 By matching By MS/MS 1 1 17012000 8135000 8876600 5427 1372 6051 13646;13647 12473 12473 2513 1 SKSISSSNPDLAVAPGSVDDEVSR PASLYLARSKSISSSN SVDDEVSRILASKGID R S K S R I 2 1 1 3 0 0 1 1 0 1 1 1 0 0 2 7 0 0 0 3 0 0 24 1 2416.1718 K7ESB7;K7EKT0;Q96HP0;K7EP20 K7ESB7 132 155 DOCK6 Dedicator of cytokinesis protein 6 yes no 3 0.00059217 58.952 By MS/MS By matching 1 1 14985000 7559900 7425200 5428 1291 6052 13648;13649 12474 12474 2323 1 SKSNPDFLKK VSGYDIMKSKSNPDFL SNPDFLKKDRSCVTRQ K S K K K D 0 0 1 1 0 0 0 0 0 0 1 3 0 1 1 2 0 0 0 0 0 0 10 2 1162.6346 Q6WCQ1;J3KSW8;H0Y7E2;H0Y2S9;J3QL44;K7EL39;J3QRL2;H7C3G6 Q6WCQ1 991 1000 MPRIP Myosin phosphatase Rho-interacting protein yes no 2 0.021087 84.479 By matching By MS/MS 1 1 3446300 1684000 1762300 5429 2174 6053 13650;13651 12475 12475 4347 1 SKSPASTSSVNGTPGSQLSTPR KSPGPSRRSKSPASTS GSQLSTPRSGKSPSPS R S K P R S 1 1 1 0 0 1 0 2 0 0 1 1 0 0 3 7 3 0 0 1 0 0 22 1 2145.0662 Q5VZY9;O15075 Q5VZY9 305 326 DCLK1 Serine/threonine-protein kinase DCLK1 yes no 3 0.0049784 50.924 By MS/MS By MS/MS 1 1 13275000 6075600 7199300 5430 2126 6054 13652;13653 12476;12477 12476 4232 2 SKSPPKVPIVIQDDSLPAGPPPQIR ITQKESRKSKSPPKVP AGPPPQIRILKRPTSN K S K I R I 1 1 0 2 0 2 0 1 0 3 1 2 0 0 7 3 0 0 0 2 0 0 25 2 2635.4697 Q7Z422 Q7Z422 37 61 SZRD1 SUZ domain-containing protein 1 yes yes 3;4 0.00078532 55.705 By matching By MS/MS 1 2 23601000 9658700 13942000 5431 2215 6055 13654;13655;13656 12478;12479 12479 4419 2 SKSPVGNPQLIQFSR NTDPWLLRSKSPVGNP PQLIQFSREVIDLLKS R S K S R E 0 1 1 0 0 2 0 1 0 1 1 1 0 1 2 3 0 0 0 1 0 0 15 1 1656.8948 G8JLP4;Q9Y4F3 G8JLP4 926 940 KIAA0430 Meiosis arrest female protein 1 yes no 3 0.00025024 86.258 By MS/MS By MS/MS 1 1 5277200 2673900 2603300 5432 1005 6056 13657;13658 12480;12481 12480 1833 2 SKSSRFSGGFGAR YKGSSRGRSKSSRFSG FSGGFGARDYRQSSGA R S K A R D 1 2 0 0 0 0 0 3 0 0 0 1 0 2 0 4 0 0 0 0 0 0 13 2 1342.6742 A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O00571;A0A087WVZ1 A0A0D9SFB3 588 600 DDX3X ATP-dependent RNA helicase DDX3X yes no 3 0.0015595 87.001 By MS/MS By matching 1 1 15566000 6688000 8878400 5433 311 6057 13659;13660 12482 12482 563;564 1 SKSVIEQVSWDT TRQLRNIRSKSVIEQV IEQVSWDT________ R S K D T - 0 0 0 1 0 1 1 0 0 1 0 1 0 0 0 3 1 1 0 2 0 0 12 1 1377.6776 Q6WCQ1;H0Y7E2 Q6WCQ1 1014 1025 MPRIP Myosin phosphatase Rho-interacting protein yes no 2 3.4186E-27 177.38 By MS/MS By MS/MS 1 1 17271000 9436600 7834600 5434 2174 6058 13661;13662 12483;12484 12484 4348 2 SKSVKEDSNLTLQEK KTPDKMKKSKSVKEDS SNLTLQEKKEKIQTGL K S K E K K 0 0 1 1 0 1 2 0 0 0 2 3 0 0 0 3 1 0 0 1 0 0 15 2 1704.8894 H0YLE8;P46940 H0YLE8 869 883 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2;3 1.5453E-29 164.01 By MS/MS By MS/MS 2 2 40064000 21502000 18562000 5435 1091 6059 13663;13664;13665;13666 12485;12486;12487 12485 2007;2008 3 SKTDLLVNDNPDPAPLSPELQDFK DGGVRLNKSKTDLLVN SPELQDFKCNICGYGY K S K F K C 1 0 2 4 0 1 1 0 0 0 4 2 0 1 4 2 1 0 0 1 0 0 24 1 2652.3283 H0YC29;E5RJ97;E5RFF3;Q9UHF7 H0YC29 204 227 TRPS1 Zinc finger transcription factor Trps1 yes no 3 0.00014483 68.445 By MS/MS By MS/MS 1 1 14046000 8324400 5721100 5436 691 6060 13667;13668 12488;12489 12488 1229 2 SKTFNPGAGLPTDK LAKDIARRSKTFNPGA GAGLPTDKKKGGPSPG R S K D K K 1 0 1 1 0 0 0 2 0 0 1 2 0 1 2 1 2 0 0 0 0 0 14 1 1431.7358 H0YMA0;H0YLR3;P09661 H0YMA0 73 86 SNRPA1 U2 small nuclear ribonucleoprotein A yes no 2 0.0099548 95.755 By MS/MS 1 0 0 0 5437 1098 6061 13669 12490 12490 6532 1 SKTPVQAAAVSIVEKPVTR KKPNKSKRSKTPVQAA IVEKPVTRKSERIDRE R S K T R K 3 1 0 0 0 1 1 0 0 1 0 2 0 0 2 2 2 0 0 4 0 0 19 2 1980.1368 Q96T58 Q96T58 1824 1842 SPEN Msx2-interacting protein yes yes 3 1.8888E-05 91.725 By MS/MS By MS/MS 1 1 7803000 2982200 4820800 5438 2545 6062 13670;13671 12491;12492 12492 7021 2 SKTQLSPSIK TTRSEAQRSKTQLSPS TQLSPSIKRKREVSPP R S K I K R 0 0 0 0 0 1 0 0 0 1 1 2 0 0 1 3 1 0 0 0 0 0 10 1 1087.6237 Q8NFC6;H0Y9Y2 Q8NFC6 3014 3023 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 no no 2 0.0030545 89.44 By MS/MS By MS/MS 1 1 10572000 5668000 4903700 5439 2353;1048 6063 13672;13673 12493;12494 12493 1945 2 SKVGSTENIK APDLKNVRSKVGSTEN VGSTENIKHQPGGGRA R S K I K H 0 0 1 0 0 0 1 1 0 1 0 2 0 0 0 2 1 0 0 1 0 0 10 1 1061.5717 E7EVA0;P27816;H0Y2V1;F8W9U4;H7C4C5 E7EVA0 2082 2091 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 3.4399E-05 133.88 By MS/MS By MS/MS 1 1 25865000 12460000 13406000 5440 742 6064 13674;13675 12495;12496;12497;12498 12496 1348 4 SKVGSTENIKHQPGGGR APDLKNVRSKVGSTEN KHQPGGGRAKVEKKTE R S K G R A 0 1 1 0 0 1 1 4 1 1 0 2 0 0 1 2 1 0 0 1 0 0 17 2 1750.9074 E7EVA0;P27816;H0Y2V1;F8W9U4;H7C4C5 E7EVA0 2082 2098 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3;4 3.047E-05 85.177 By matching By MS/MS 2 2 89009000 10537000 78472000 5441 742 6065 13676;13677;13678;13679 12499;12500 12499 1348 2 SLAADDEGGPELEPDYGTATR YGLEDDTRSLAADDEG PDYGTATRRRPECGRG R S L T R R 3 1 0 3 0 0 3 3 0 0 2 0 0 0 2 1 2 0 1 0 0 0 21 0 2162.9604 C9JJX6;E9PDC3;O00192 C9JJX6 204 224 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 2 1.2723E-09 101.62 By MS/MS By MS/MS 1 1 14240000 8914300 5325500 5442 596 6066 13680;13681 12501;12502 12501 7321 2 SLAALDALNTDDENDEEEYEAWK KELEENKRSLAALDAL EEEYEAWKVRELKRIK R S L W K V 4 0 2 4 0 0 5 0 0 0 3 1 0 0 0 1 1 1 1 0 0 0 23 0 2640.1351 P55081 P55081 258 280 MFAP1 Microfibrillar-associated protein 1 yes yes 2;3 2.5073E-43 145.73 By MS/MS By MS/MS 2 2 125960000 61655000 64307000 5443 1772 6067 13682;13683;13684;13685 12503;12504;12505 12504 6740 3 SLAALDALNTDDENDEEEYEAWKVR KELEENKRSLAALDAL EYEAWKVRELKRIKRD R S L V R E 4 1 2 4 0 0 5 0 0 0 3 1 0 0 0 1 1 1 1 1 0 0 25 1 2895.3046 P55081 P55081 258 282 MFAP1 Microfibrillar-associated protein 1 yes yes 3 8.4799E-07 82.635 By MS/MS By MS/MS 1 1 217900000 142710000 75189000 5444 1772 6068 13686;13687 12506;12507 12507 6740 2 SLADELALVDVLEDK CAISILGKSLADELAL LVDVLEDKLKGEMMDL K S L D K L 2 0 0 3 0 0 2 0 0 0 4 1 0 0 0 1 0 0 0 2 0 0 15 0 1628.8509 P07195;A8MW50;F5H793;C9J7H8 P07195 44 58 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 2 6.3582E-15 136.27 By MS/MS By matching 1 1 4536400 3982400 554010 5445 1535 6069 13688;13689 12508 12508 1 SLADIEEEYNYGFVVEK AFGDLTIKSLADIEEE NYGFVVEKTAAARLPP K S L E K T 1 0 1 1 0 0 4 1 0 1 1 1 0 1 0 1 0 0 2 2 0 0 17 0 2003.9364 E9PLZ8;Q96EY5 E9PLZ8 107 123 MVB12A Multivesicular body subunit 12A yes no 2 1.298E-11 124.38 By MS/MS By MS/MS 2 2 25459000 15611000 9847900 5446 824 6070;6071 13690;13691;13692;13693 12509;12510;12511 12510 7387;7388 3 SLADIGKTVSSASR QTKKSNLRSLADIGKT KTVSSASRMFTNPDNG R S L S R M 2 1 0 1 0 0 0 1 0 1 1 1 0 0 0 4 1 0 0 1 0 0 14 1 1390.7416 Q9Y6R1 Q9Y6R1 223 236 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 yes yes 2 0.0048417 72.615 By MS/MS By MS/MS 1 1 3947300 1870800 2076500 5447 2954 6072 13694;13695 12512;12513 12513 6136;6137 2 SLALMYESEK ATAASTSRSLALMYES ALMYESEKVGVASSEE R S L E K V 1 0 0 0 0 0 2 0 0 0 2 1 1 0 0 2 0 0 1 0 0 0 10 0 1169.5638 O95721 O95721 63 72 SNAP29 Synaptosomal-associated protein 29 yes yes 2 0.0025017 79.986 By MS/MS By MS/MS 1 1 5579500 3828700 1750800 5448 1500 6073 13696;13697 12514;12515 12515 7544 2 SLALMYESEKVGVASSEELAR ATAASTSRSLALMYES ASSEELARQRGVLERT R S L A R Q 3 1 0 0 0 0 4 1 0 0 3 1 1 0 0 4 0 0 1 2 0 0 21 1 2268.1308 O95721 O95721 63 83 SNAP29 Synaptosomal-associated protein 29 yes yes 3 0.009157 47.75 By MS/MS 1 1530100 1530100 0 5449 1500 6074 13698 12516 12516 7544 1 SLASIEAK YTTHHILKSLASIEAK SLASIEAKCSDMSSEN K S L A K C 2 0 0 0 0 0 1 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 8 0 817.45453 E9PHV5;P28290;E7EUL7 E9PHV5 665 672 SSFA2 Sperm-specific antigen 2 yes no 2 0.017205 75.652 By MS/MS By MS/MS 1 1 8370700 4300000 4070700 5450 798 6075 13699;13700 12517;12518 12517 1430 2 SLASVLEGQKYCYR PSPASLLKSLASVLEG EGQKYCYRGTGAAVST K S L Y R G 1 1 0 0 1 1 1 1 0 0 2 1 0 0 0 2 0 0 2 1 0 0 14 1 1672.8243 O15054 O15054 806 819 KDM6B Lysine-specific demethylase 6B yes yes 2 0.025003 51.359 By MS/MS 1 0 0 0 5451 1355 6076 13701 12519 12519 7515;7516 1 SLATMDSPPHQK KASQSRKRSLATMDSP MDSPPHQKQPQRGEVS R S L Q K Q 1 0 0 1 0 1 0 0 1 0 1 1 1 0 2 2 1 0 0 0 0 0 12 0 1310.6289 Q14676 Q14676 1814 1825 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 0.0015077 95.264 By MS/MS By MS/MS 1 1 7846300 4832100 3014200 5452 1951 6077 13702;13703 12520;12521 12520 3777 1 SLDDKPYK SSFSRLRRSLDDKPYK SLDDKPYKCTECEKSF R S L Y K C 0 0 0 2 0 0 0 0 0 0 1 2 0 0 1 1 0 0 1 0 0 0 8 1 964.48656 P17026 P17026 49 56 ZNF22 Zinc finger protein 22 yes yes 2 0.0093193 134.25 By MS/MS By MS/MS 1 1 13137000 5941700 7195700 5453 1589 6078 13704;13705 12522;12523;12524 12523 2917 3 SLDGAPIGVMDQSLMK TSSKRVSRSLDGAPIG VMDQSLMKDFPGAAGE R S L M K D 1 0 0 2 0 1 0 2 0 1 2 1 2 0 1 2 0 0 0 1 0 0 16 0 1660.8164 O43491;E9PK52;E9PHY5;H0Y5B0;E9PII3 O43491 550 565 EPB41L2 Band 4.1-like protein 2 yes no 2 0.0019916 72.315 By MS/MS By MS/MS 2 2 16043000 8728200 7314600 5454 1387 6079;6080 13706;13707;13708;13709 12525;12526;12527;12528;12529 12529 166 2544 5 SLDGASVNENHEIYMK SKRYTMSRSLDGASVN ENHEIYMKDSMSAAEV R S L M K D 1 0 2 1 0 0 2 1 1 1 1 1 1 0 0 2 0 0 1 1 0 0 16 0 1805.8254 A0A0A0MRA8;A0A0A0MSA4;A8K968;J3KT37;A0A1B0GTF8;A0A0J9YW26 A0A0A0MRA8 443 458 EPB41L3 yes no 2;3 6.4781E-05 102.52 By MS/MS By MS/MS 2 2 17661000 10935000 6725600 5455 175 6081 13710;13711;13712;13713 12530;12531;12532;12533 12531 7194 4 SLDGEVGTGQYATTK SKRYTMSRSLDGEVGT TGQYATTKGISQTNLI R S L T K G 1 0 0 1 0 1 1 3 0 0 1 1 0 0 0 1 3 0 1 1 0 0 15 0 1525.726 Q9Y2J2 Q9Y2J2 443 457 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes yes 2 1.4095E-27 155.99 By matching By MS/MS 1 1 22438000 11522000 10916000 5456 2891 6082 13714;13715 12534 12534 7122 1 SLDGSGSEPAVCEMCGIVGTR LLSPGTPRSLDGSGSE MCGIVGTREAFFSKTK R S L T R E 1 1 0 1 2 0 2 4 0 1 1 0 1 0 1 3 1 0 0 2 0 0 21 0 2180.95 H7C228;Q969R5 H7C228 71 91 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 yes no 2 0.010789 52.612 By matching By MS/MS 1 1 6649200 3985200 2664000 5457 1173 6083 13716;13717 12535 12535 2132 1 SLDGVTNDR QPNIPKAKSLDGVTND LDGVTNDRTASQGQWG K S L D R T 0 1 1 2 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 975.46214 E9PRL8;E9PQ71;E9PIP9;E9PJ54;E9PM00;Q9UBM7 E9PRL8 14 22 DHCR7 7-dehydrocholesterol reductase yes no 2 0.0085829 76.143 By MS/MS By MS/MS 1 1 9266600 4756600 4510000 5458 803 6084 13718;13719 12536;12537 12537 1437 2 SLDLFNCEVTNLNDYR LKKLENLKSLDLFNCE VTNLNDYRENVFKLLP K S L Y R E 0 1 3 2 1 0 1 0 0 0 3 0 0 1 0 1 1 0 1 1 0 0 16 0 1971.8996 P39687;H0YN26;Q92688 P39687 117 132 ANP32A;ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member B no no 2 3.7087E-06 138.94 By MS/MS By matching 1 1 6684000 4160000 2524000 5459 1681;2432 6085 13720;13721 12538;12539 12539 2 SLDNGGYYISPR VIKHYKIRSLDNGGYY GGYYISPRITFPCISD R S L P R I 0 1 1 1 0 0 0 2 0 1 1 0 0 0 1 2 0 0 2 0 0 0 12 0 1340.6361 P07948 P07948 187 198 LYN Tyrosine-protein kinase Lyn yes yes 2 0.028649 48.284 By MS/MS By matching 1 1 4401500 2339000 2062500 5460 1541 6086 13722;13723 12540 12540 7551 0 SLDNNYSTPNER SNMGSNTKSLDNNYST NYSTPNERGDHNRTLD K S L E R G 0 1 3 1 0 0 1 0 0 0 1 0 0 0 1 2 1 0 1 0 0 0 12 0 1408.6219 C9JZR2;O60716;H0YC95 C9JZR2 899 910 CTNND1 Catenin delta-1 yes no 2 0.00025196 108.9 By MS/MS By MS/MS 3 2 151550000 81283000 70264000 5461 624 6087;6088 13724;13725;13726;13727;13728 12541;12542;12543;12544;12545;12546 12546 1136;6386;7335 5 SLDNNYSTPNERGDHNR SNMGSNTKSLDNNYST NERGDHNRTLDRSGDL K S L N R T 0 2 4 2 0 0 1 1 1 0 1 0 0 0 1 2 1 0 1 0 0 0 17 1 1987.8732 C9JZR2;O60716;H0YC95 C9JZR2 899 915 CTNND1 Catenin delta-1 yes no 3 4.7779E-05 83.823 By MS/MS By MS/MS 1 1 48185000 18075000 30110000 5462 624 6089 13729;13730 12547;12548 12547 1136;6386;7335 2 SLDSDESEDEEDDYQQKR GDPKKEKKSLDSDESE EDDYQQKRKGVEGLID K S L K R K 0 1 0 5 0 2 4 0 0 0 1 1 0 0 0 3 0 0 1 0 0 0 18 1 2186.8724 Q13442 Q13442 57 74 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 3 0.00090773 66.436 By MS/MS By MS/MS 1 1 9999100 6272900 3726200 5463 1916 6090 13731;13732 12549;12550 12549 3691;3692 2 SLDSPTSSPGAGTR VGGGSESRSLDSPTSS SSPGAGTRQLVKASST R S L T R Q 1 1 0 1 0 0 0 2 0 0 1 0 0 0 2 4 2 0 0 0 0 0 14 0 1331.6317 K7EJC2;Q9P107 K7EJC2 178 191 GMIP GEM-interacting protein yes no 2 0.0019876 81.904 By MS/MS 1 2736700 0 2736700 5464 1267 6091 13733 12551 12551 2298 1 SLDTLQNVSLQLEGLERDNK LENRTLRKSLDTLQNV EGLERDNKQLDAENLE K S L N K Q 0 1 2 2 0 2 2 1 0 0 5 1 0 0 0 2 1 0 0 1 0 0 20 1 2271.1707 Q9P219 Q9P219 681 700 CCDC88C Protein Daple yes yes 3 0.010303 62.203 By MS/MS By matching 1 1 790800000 474700000 316100000 5465 2780 6092 13734;13735 12552 12552 1 SLDYLNLDK KGKRAHSKSLDYLNLD LDYLNLDKMIKEPADT K S L D K M 0 0 1 2 0 0 0 0 0 0 3 1 0 0 0 1 0 0 1 0 0 0 9 0 1079.5499 Q96GV9 Q96GV9 167 175 C5orf30 UNC119-binding protein C5orf30 yes yes 2 0.019194 65.695 By MS/MS By matching 1 1 2835500 1806300 1029200 5466 2491 6093 13736;13737 12553 12553 5019 1 SLEDLRAPK LQPLGQAKSLEDLRAP LEDLRAPKDLREQPGT K S L P K D 1 1 0 1 0 0 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 9 1 1027.5662 Q8TEH3 Q8TEH3 592 600 DENND1A DENN domain-containing protein 1A yes yes 2 0.0039454 93.442 By MS/MS By matching 1 1 8863800 4476300 4387500 5467 2387 6094 13738;13739 12554 12554 4771 1 SLEDPYSQQIR PRTTIFVKSLEDPYSQ DPYSQQIRLQQQQAQQ K S L I R L 0 1 0 1 0 2 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 0 11 0 1334.6466 A0A087WXK3;Q9NVH2 A0A087WXK3 120 130 INTS7 Integrator complex subunit 7 yes no 2 4.4727E-06 135.71 By MS/MS By MS/MS 1 1 7738000 4114100 3623900 5468 87 6095 13740;13741 12555;12556 12556 7164 2 SLEGGGCPAR EEGKRSRRSLEGGGCP EGGGCPARAPEPGPTG R S L A R A 1 1 0 0 1 0 1 3 0 0 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1002.4553 Q9Y613 Q9Y613 367 376 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.00013762 115.23 By MS/MS By MS/MS 2 2 11133000 6127600 5005300 5469 2943 6096 13742;13743;13744;13745 12557;12558;12559 12558 6111 3 SLELSSLAGPGEDPLSADSLGKPTR EKWQEHRRSLELSSLA DSLGKPTRVPGGAELS R S L T R V 2 1 0 2 0 0 2 3 0 0 5 1 0 0 3 5 1 0 0 0 0 0 25 1 2496.2708 G5E953;Q13615 G5E953 511 535 MTMR3 Myotubularin-related protein 3 yes no 3 0.017855 42.057 By MS/MS By matching 1 1 3234000 1589400 1644600 5470 989 6097 13746;13747 12560 12560 1804 1 SLENPTPPFTPK STSSLSTRSLENPTPP PTPPFTPKMGRRSIES R S L P K M 0 0 1 0 0 0 1 0 0 0 1 1 0 1 4 1 2 0 0 0 0 0 12 0 1326.682 O15085 O15085 663 674 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 2 0.010014 98.249 By MS/MS 1 0 0 0 5471 1357 6098 13748 12561 12561 6599 1 SLEPRPWSSTDSDGSVR SSTDSELKSLEPRPWS TDSDGSVRSMRPPVTK K S L V R S 0 2 0 2 0 0 1 1 0 0 1 0 0 0 2 5 1 1 0 1 0 0 17 1 1874.8759 H7C0E9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H0YIX9 H7C0E9 87 103 R3HDM2 R3H domain-containing protein 2 yes no 3 0.0086396 52.887 By MS/MS 1 1779700 1779700 0 5472 350 6099 13749 12562 12562 646 1 SLESINSR VAAKKTKKSLESINSR SLESINSRLQLVMKSG K S L S R L 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 8 0 904.46141 E5RI99;P62888;E5RJH3;A0A0C4DH44 E5RI99 10 17 RPL30 60S ribosomal protein L30 yes no 2 0.012375 83.883 By MS/MS By MS/MS 1 1 7173000 3131000 4042000 5473 700 6100 13750;13751 12563;12564 12564 1239 2 SLESLADGGSASPIKDQPVMAVK EKERPEHKSLESLADG DQPVMAVKTGEDGSNL K S L V K T 3 0 0 2 0 1 1 2 0 1 2 2 1 0 2 4 0 0 0 2 0 0 23 1 2299.173 Q9HB96 Q9HB96 238 260 FANCE Fanconi anemia group E protein yes yes 2;3 5.4418E-09 89.26 By MS/MS By MS/MS 2 2 23938000 13995000 9942800 5474 2688 6101 13752;13753;13754;13755 12565;12566;12567 12566 5479;5480 3 SLEVIPEKANDETGE ADVQKPRRSLEVIPEK KANDETGE________ R S L G E - 1 0 1 1 0 0 4 1 0 1 1 1 0 0 1 1 1 0 0 1 0 0 15 1 1629.7734 Q9UPR0 Q9UPR0 1113 1127 PLCL2 Inactive phospholipase C-like protein 2 yes yes 2 1.6006E-23 153.09 By MS/MS By MS/MS 1 1 32226000 17282000 14944000 5475 2869 6102 13756;13757 12568;12569;12570 12569 5916 3 SLEYLDLSFNQIAR SAAFKGLKSLEYLDLS LSFNQIARLPSGLPVS K S L A R L 1 1 1 1 0 1 1 0 0 1 3 0 0 1 0 2 0 0 1 0 0 0 14 0 1667.8519 P51884 P51884 185 198 LUM Lumican yes yes 2 1.2203E-75 160.77 By MS/MS By MS/MS 1 1 33168000 0 33168000 5476 1750 6103 13758;13759 12571;12572 12572 1 SLFINHHPPGQIAR TDVREKRKSLFINHHP HPPGQIARKYSSCSTI K S L A R K 1 1 1 0 0 1 0 1 2 2 1 0 0 1 2 1 0 0 0 0 0 0 14 0 1585.8477 Q8ND76;R4GN48;R4GNF3 Q8ND76 83 96 CCNY Cyclin-Y yes no 3 0.025951 46.892 By matching By MS/MS 1 1 3255100 1541600 1713500 5477 2342 6104 13760;13761 12573 12573 1 SLGGAVGSVASGAR APAAPRSRSLGGAVGS GSVASGARAAQSPFSI R S L A R A 3 1 0 0 0 0 0 4 0 0 1 0 0 0 0 3 0 0 0 2 0 0 14 0 1187.6258 Q8NHG8 Q8NHG8 82 95 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 yes yes 2 0.0013586 85.976 By matching By MS/MS 1 1 20796000 11932000 8863600 5478 2360 6105 13762;13763 12574 12574 4734 1 SLGGESSGGTTPVGSFHTEAAR LAHRELLKSLGGESSG SFHTEAARWTDGSLSP K S L A R W 2 1 0 0 0 0 2 5 1 0 1 0 0 1 1 4 3 0 0 1 0 0 22 0 2103.9821 O15085 O15085 1452 1473 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 3 0.0048421 60.602 By MS/MS By matching 2 2 24787000 13316000 11471000 5479 1357 6106;6107 13764;13765;13766;13767 12575;12576 12576 2478;2479;6600;6601 2 SLGGSATSLCLLPSEETSGEESR EPEVVLGRSLGGSATS ETSGEESRAAVGPRRS R S L S R A 1 1 0 0 1 0 4 3 0 0 4 0 0 0 1 6 2 0 0 0 0 0 23 0 2366.0907 Q9P244 Q9P244 642 664 LRFN1 Leucine-rich repeat and fibronectin type III domain-containing protein 1 yes yes 2 0.0093128 50.425 By MS/MS By matching 1 1 7584800 4486200 3098600 5480 2781 6108 13768;13769 12577 12577 5710 1 SLGHPEPLSNGRPQGNSR RQEHNDRRSLGHPEPL GRPQGNSRQVVEQDEE R S L S R Q 0 2 2 0 0 1 1 3 1 0 2 0 0 0 3 3 0 0 0 0 0 0 18 1 1901.9456 P49768;G3V5B1;G3V3P0;G3V449;G3V2B1;G3V519;G3V4M0;H0YM52;G3V4P4;G3V3Z0;G3V499;G3V2G7 P49768 43 60 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 yes no 3 0.020573 50.226 By MS/MS By matching 1 1 15005000 9045400 5959300 5481 1728 6109 13770;13771 12578 12578 3244 1 SLGKDGSLEDDEDEEDDLDEGVGGK MVENEVIKSLGKDGSL LDEGVGGKRRSMEVKP K S L G K R 0 0 0 7 0 0 5 5 0 0 3 2 0 0 0 2 0 0 0 1 0 0 25 1 2622.094 Q12789 Q12789 1605 1629 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2;3 6.6975E-11 93.384 By MS/MS By MS/MS 2 2 57974000 29009000 28965000 5482 1876 6110 13772;13773;13774;13775 12579;12580;12581 12581 3555 3 SLGLDINMDSR STTPLQERSLGLDINM LDINMDSRIIHENIVE R S L S R I 0 1 1 2 0 0 0 1 0 1 2 0 1 0 0 2 0 0 0 0 0 0 11 0 1219.5867 Q96H22 Q96H22 226 236 CENPN Centromere protein N yes yes 2 0.0062142 74.533 By MS/MS 1 680000 680000 0 5483 2497 6111 13776 12582 12582 5025 1 SLGLSLSGGDQEDAGR VDPLVPLRSLGLSLSG GDQEDAGRILIEELRD R S L G R I 1 1 0 2 0 1 1 4 0 0 3 0 0 0 0 3 0 0 0 0 0 0 16 0 1560.738 H0YE82;H7C1L7;H0YEB7;C9JEV6;H7C3G9;Q9UJ70 H0YE82 19 34 NAGK N-acetyl-D-glucosamine kinase yes no 2 0.0019715 72.428 By MS/MS By MS/MS 1 1 4507900 2620600 1887300 5484 586 6112 13777;13778 12583;12584 12584 1066 2 SLGNILQAKPTSSPAK AVAPAQEKSLGNILQA KPTSSPAKGPPQKAGP K S L A K G 2 0 1 0 0 1 0 1 0 1 2 2 0 0 2 3 1 0 0 0 0 0 16 1 1610.8992 Q13428;J3KQ96;E7ETY2 Q13428 571 586 TCOF1 Treacle protein yes no 2;3 1.5093E-56 190.18 By MS/MS By MS/MS 2 2 93987000 49896000 44091000 5485 1915 6113 13779;13780;13781;13782 12585;12586;12587;12588 12588 3684;3685;6796 4 SLGNILQAKPTSSPAKGPPQK AVAPAQEKSLGNILQA PAKGPPQKAGPVAVQV K S L Q K A 2 0 1 0 0 2 0 2 0 1 2 3 0 0 4 3 1 0 0 0 0 0 21 2 2118.1797 Q13428;J3KQ96;E7ETY2 Q13428 571 591 TCOF1 Treacle protein yes no 3;4 1.4231E-07 90.545 By MS/MS By MS/MS 2 2 201040000 114660000 86384000 5486 1915 6114 13783;13784;13785;13786 12589;12590;12591;12592;12593 12589 3684;3685;6796 5 SLGQWLQEEKVPAIYGVDTRMLTK YNHWLATKSLGQWLQE VDTRMLTKIIRDKGTM K S L T K I 1 1 0 1 0 2 2 2 0 1 3 2 1 0 1 1 2 1 1 2 0 0 24 2 2761.4473 Q5R211;P31327 Q5R211 148 171 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes no 4 0.01994 43.823 By MS/MS By matching 1 1 19857000 12469000 7387100 5487 1658 6115 13787;13788 12594 12594 7589 0 SLGRAEVALGAQGPR AELRGKTRSLGRAEVA ALGAQGPREKPAPPQK R S L P R E 3 2 0 0 0 1 1 3 0 0 2 0 0 0 1 1 0 0 0 1 0 0 15 1 1480.811 A0A096LNX8;Q96GP6 A0A096LNX8 785 799 SCARF2 Scavenger receptor class F member 2 yes no 3 0.0311 44.054 By MS/MS By matching 1 1 5723100 3394100 2328900 5488 155 6116 13789;13790 12595 12595 1 SLGSASPGPGQPPLSSPTR SKSNGQPKSLGSASPG PPLSSPTRGGVKKVSG K S L T R G 1 1 0 0 0 1 0 3 0 0 2 0 0 0 5 5 1 0 0 0 0 0 19 0 1791.9115 Q9C0B5 Q9C0B5 679 697 ZDHHC5 Palmitoyltransferase ZDHHC5 yes yes 2 0.0028189 66.708 By MS/MS By MS/MS 1 1 11029000 6289100 4740100 5489 2614 6117 13791;13792 12596;12597 12597 5291;5292 2 SLHGPCPVTTFGPK TKEFRRTRSLHGPCPV PVTTFGPKACVLQNPQ R S L P K A 0 0 0 0 1 0 0 2 1 0 1 1 0 1 3 1 2 0 0 1 0 0 14 0 1496.7446 O95544 O95544 64 77 NADK NAD kinase yes yes 2 1.2996E-07 124.42 By MS/MS By MS/MS 1 1 18731000 10516000 8214600 5490 1491 6118 13793;13794 12598;12599 12599 2764 2 SLHLSPQEQSASYQDR HQERLQSKSLHLSPQE QSASYQDRRQSWRRAS K S L D R R 1 1 0 1 0 3 1 0 1 0 2 0 0 0 1 4 0 0 1 0 0 0 16 0 1844.8653 Q5JW53;Q9H410 Q5JW53 77 92 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.0069304 62.377 By matching By MS/MS 1 1 6558900 3378700 3180200 5491 2080 6119 13795;13796 12600;12601 12600 4099 2 SLHPWYGITPTSSPK GHPESTPKSLHPWYGI ITPTSSPKTKKRPAPR K S L P K T 0 0 0 0 0 0 0 1 1 1 1 1 0 0 3 3 2 1 1 0 0 0 15 0 1669.8464 Q8N3F8;H0Y6J8 Q8N3F8 459 473 MICALL1 MICAL-like protein 1 yes no 2;3 0.0003012 83.243 By matching By MS/MS 1 2 13584000 6487700 7096600 5492 2305 6120 13797;13798;13799 12602;12603;12604 12602 4628;7797 3 SLIGSPGR GSKKHDVRSLIGSPGR SLIGSPGRTFPPVHPL R S L G R T 0 1 0 0 0 0 0 2 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 0 785.43955 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7 C9JE98 1465 1472 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.012375 83.883 By MS/MS By MS/MS 1 1 11927000 7579100 4348100 5493 552 6121 13800;13801 12605;12606 12605 1022 2 SLKESEQESEEEILAQK VEGNKGTKSLKESEQE EEEILAQKKEQREEEV K S L Q K K 1 0 0 0 0 2 6 0 0 1 2 2 0 0 0 3 0 0 0 0 0 0 17 1 1975.9586 Q9BW71 Q9BW71 219 235 HIRIP3 HIRA-interacting protein 3 yes yes 2;3 0.01041 65.924 By MS/MS By MS/MS 2 2 41281000 24969000 16312000 5494 2589 6122 13802;13803;13804;13805 12607;12608;12609 12607 5236;5237 3 SLKESEQESEEEILAQKK VEGNKGTKSLKESEQE EEILAQKKEQREEEVE K S L K K E 1 0 0 0 0 2 6 0 0 1 2 3 0 0 0 3 0 0 0 0 0 0 18 2 2104.0536 Q9BW71 Q9BW71 219 236 HIRIP3 HIRA-interacting protein 3 yes yes 3 5.1904E-05 84.025 By MS/MS By MS/MS 2 2 117890000 70507000 47383000 5495 2589 6123;6124 13806;13807;13808;13809 12610;12611;12612 12611 5236;5237 3 SLKTQLSQGR SAFTQDTRSLKTQLSQ KTQLSQGRSSPQLDPL R S L G R S 0 1 0 0 0 2 0 1 0 0 2 1 0 0 0 2 1 0 0 0 0 0 10 1 1116.6251 Q8ND56 Q8ND56 172 181 LSM14A Protein LSM14 homolog A yes yes 3 0.00075922 101.56 By MS/MS By MS/MS 1 1 9446300 4421800 5024600 5496 2340 6125 13810;13811 12613;12614 12613 4691 2 SLLGDSAPTLHLNKGTPSQSPVVGR TPEVKPLKSLLGDSAP SQSPVVGRSQGQQQEK K S L G R S 1 1 1 1 0 1 0 3 1 0 4 1 0 0 3 4 2 0 0 2 0 0 25 1 2530.3503 P52594;C9J2I0;B8ZZY2 P52594 162 186 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 3 0.0012897 56.29 By MS/MS By MS/MS 1 1 19333000 9772600 9560700 5497 1753 6126 13812;13813 12615;12616 12616 3310;6729;6730 2 SLLGIDTEDAIQGR QGLDLSSRSLLGIDTE TEDAIQGRNESCDISK R S L G R N 1 1 0 2 0 1 1 2 0 2 2 0 0 0 0 1 1 0 0 0 0 0 14 0 1486.7627 P49454 P49454 1750 1763 CENPF Centromere protein F yes yes 2 0.0028908 76.728 By matching By MS/MS 1 1 2012000 1268200 743720 5498 1724 6127 13814;13815 12617 12617 3232 1 SLLGLDSGELQSGPESSSSPGVHVR TSVGTGTRSLLGLDSG SSPGVHVRQTKEAPAK R S L V R Q 0 1 0 1 0 1 2 4 1 0 4 0 0 0 2 7 0 0 0 2 0 0 25 0 2494.23 P49815;H3BMQ0 P49815 1079 1103 TSC2 Tuberin yes no 3 0.012415 44.863 By MS/MS By matching 1 1 7075000 3475300 3599700 5499 1731 6128 13816;13817 12618 12618 3270 1 SLLQSEQQPSWTDDLPLCHLSGVGSASNR ________________ GVGSASNRSYSADGKG R S L N R S 1 1 1 2 1 3 1 2 1 0 5 0 0 0 2 6 1 1 0 1 0 0 29 0 3181.5098 Q15750 Q15750 7 35 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 3 4.0383E-06 70.249 By MS/MS By MS/MS 1 1 45887000 36414000 9473000 5500 2007 6129 13818;13819 12619;12620 12619 3915 2 SLLRQPDISCILGTGGKSPR QPFTPTSRSLLRQPDI GTGGKSPRLTQSSGFF R S L P R L 0 2 0 1 1 1 0 3 0 2 3 1 0 0 2 3 1 0 0 0 0 0 20 2 2154.1579 G3V1T4;P57740 G3V1T4 69 88 NUP107 Nuclear pore complex protein Nup107 yes no 3 1.2728E-18 124.98 By MS/MS By MS/MS 1 1 46301000 27426000 18875000 5501 961 6130 13820;13821 12621;12622 12622 1749;6486 2 SLLSHEFQDETDTEEETLYSSKH MMSTGSKKSLLSHEFQ ETLYSSKH________ K S L K H - 0 0 0 2 0 1 5 0 2 0 3 1 0 1 0 4 3 0 1 0 0 0 23 1 2724.2039 O75976 O75976 1358 1380 CPD Carboxypeptidase D yes yes 3 2.3871E-72 170.02 By matching By MS/MS 1 1 69776000 36106000 33670000 5502 1453 6131 13822;13823 12623 12623 7535 1 SLLSSPTK KTYVSCLKSLLSSPTK SLLSSPTKDSKPNISA K S L T K D 0 0 0 0 0 0 0 0 0 0 2 1 0 0 1 3 1 0 0 0 0 0 8 0 831.47018 Q92667;I3NI36 Q92667 441 448 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.0086452 92.239 By MS/MS 1 4675900 4675900 0 5503 2431 6132 13824 12624 12624 4895 1 SLMSISNAGSGLLSHSSTLTGSPIMEEK LSCMRPAKSLMSISNA GSPIMEEKRDDKSWKG K S L E K R 1 0 1 0 0 0 2 3 1 2 4 1 2 0 1 8 2 0 0 0 0 0 28 0 2833.3838 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 787 814 AMOT Angiomotin yes no 3 0.001067 50.945 By matching By MS/MS 2 2 20922000 13559000 7363800 5504 2051 6133;6134 13825;13826;13827;13828 12625;12626 12625 276;277 4030;4031 2 SLMSSPEDLTK AKELEAERSLMSSPED SSPEDLTKDFEELKAE R S L T K D 0 0 0 1 0 0 1 0 0 0 2 1 1 0 1 3 1 0 0 0 0 0 11 0 1206.5802 P46821 P46821 828 838 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.011395 64.945 By MS/MS By MS/MS 1 1 4322500 2038400 2284000 5505 1712 6135 13829;13830 12627;12628 12627 3178;3179 2 SLNFGGSTGTVPAPR NVTSNARRSLNFGGST TGTVPAPRLAPTGVSW R S L P R L 1 1 1 0 0 0 0 3 0 0 1 0 0 1 2 2 2 0 0 1 0 0 15 0 1459.7419 H3BPM0;H3BS25;Q9BY12;H3BQF3;H3BU24;H3BR40 H3BPM0 200 214 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum yes no 2 0.013101 71.08 By MS/MS By matching 1 1 2053500 1116700 936770 5506 1125 6136 13831;13832 12629 12629 2056 0 SLNLEDYK AKDGAPRRSLNLEDYK SLNLEDYKKRRGLI__ R S L Y K K 0 0 1 1 0 0 1 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 8 0 980.48148 Q92541 Q92541 697 704 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 2 0.0067951 99.788 By MS/MS By MS/MS 1 1 2719400 1568400 1151000 5507 2422 6137 13833;13834 12630;12631 12630 4870 2 SLNLEDYKK AKDGAPRRSLNLEDYK LNLEDYKKRRGLI___ R S L K K R 0 0 1 1 0 0 1 0 0 0 2 2 0 0 0 1 0 0 1 0 0 0 9 1 1108.5764 Q92541 Q92541 697 705 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 2 0.006687 110.93 By matching By MS/MS 1 1 7997800 4918100 3079700 5508 2422 6138 13835;13836 12632 12632 4870 1 SLNLQAESVR DIERASFRSLNLQAES NLQAESVRGFNMGRAI R S L V R G 1 1 1 0 0 1 1 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1115.5935 Q12923 Q12923 890 899 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.00062011 108.98 By MS/MS By MS/MS 1 1 6379800 2567600 3812200 5509 1885 6139 13837;13838 12633;12634 12633 3594 2 SLPAGDALYLSFNPPQPSR RPVDPRRRSLPAGDAL FNPPQPSRGTDRLDLP R S L S R G 2 1 1 1 0 1 0 1 0 0 3 0 0 1 4 3 0 0 1 0 0 0 19 0 2029.0269 V9GYM8;Q92974;V9GYF0 V9GYM8 931 949 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2;3 2.0681E-09 114.43 By MS/MS By MS/MS 2 2 21978000 12858000 9120300 5510 2450 6140 13839;13840;13841;13842 12635;12636;12637;12638 12637 4938 4 SLPAPVAQRPDSPGGGLQAPGQK RESQKERKSLPAPVAQ GLQAPGQKRTPRRGEQ K S L Q K R 3 1 0 1 0 3 0 4 0 0 2 1 0 0 5 2 0 0 0 1 0 0 23 1 2227.1709 Q5JVS0 Q5JVS0 97 119 HABP4 Intracellular hyaluronan-binding protein 4 yes yes 3 0.0024846 54.857 By MS/MS By MS/MS 1 1 43343000 23796000 19546000 5511 2079 6141 13843;13844 12639;12640 12639 4096 2 SLPGPAPCLK APPLQSARSLPGPAPC PGPAPCLKHFPLDLRT R S L L K H 1 0 0 0 1 0 0 1 0 0 2 1 0 0 3 1 0 0 0 0 0 0 10 0 1038.5532 E9PJF6;H0YCL9;H0Y360;Q01433 E9PJF6 19 28 AMPD2 AMP deaminase 2 yes no 2 0.0022838 89.827 By MS/MS By MS/MS 1 1 80429000 48254000 32175000 5512 810 6142 13845;13846 12641;12642 12642 1454 2 SLPKVPAKLSPMK TTIESHTKSLPKVPAK PAKLSPMKQAQLRNFL K S L M K Q 1 0 0 0 0 0 0 0 0 0 2 3 1 0 3 2 0 0 0 1 0 0 13 2 1394.8319 A0A0A0MSW3;P35658 A0A0A0MSW3 360 372 NUP214 Nuclear pore complex protein Nup214 yes no 3 0.0052682 67.846 By MS/MS By MS/MS 1 1 0 0 0 5513 226 6143 13847;13848 12643;12644 12644 411 2 SLPLKMEPQSPGEVK PFPDRDLRSLPLKMEP PQSPGEVKKLQKGSSE R S L V K K 0 0 0 0 0 1 2 1 0 0 2 2 1 0 3 2 0 0 0 1 0 0 15 1 1638.8651 E7EUL6;A0A0C3SFZ7;E7EQ57;Q03112;H9KVD4 E7EUL6 529 543 MECOM MDS1 and EVI1 complex locus protein EVI1 yes no 3 0.00015583 103.88 By matching By MS/MS 1 1 3898700 1736400 2162300 5514 262 6144 13849;13850 12645 12645 479 1 SLPQEQKPLEIK FSDINLSKSLPQEQKP EQKPLEIKPAPFVRSR K S L I K P 0 0 0 0 0 2 2 0 0 1 2 2 0 0 2 1 0 0 0 0 0 0 12 1 1408.7926 A0A0G2JNU3;A6H8Y1 A0A0G2JNU3 1418 1429 BDP1 Transcription factor TFIIIB component B homolog yes no 2 0.02967 42.338 By MS/MS 1 0 0 0 5515 328 6145 13851 12646 12646 1 SLPSASTSKATISDEEIER AKAPSAARSLPSASTS ISDEEIERQLKALGVD R S L E R Q 2 1 0 1 0 0 3 0 0 2 1 1 0 0 1 5 2 0 0 0 0 0 19 1 2019.996 C9J0A7;Q9UQN3 C9J0A7 157 175 CHMP2B Charged multivesicular body protein 2b yes no 3 0.021854 44.304 By matching By MS/MS 1 1 26947000 12937000 14010000 5516 548 6146 13852;13853 12647 12647 1000 1 SLPSSSQLKGSPQAISR SPLYLVSRSLPSSSQL GSPQAISRASELHLLE R S L S R A 1 1 0 0 0 2 0 1 0 1 2 1 0 0 2 6 0 0 0 0 0 0 17 1 1741.9323 Q8WYP5 Q8WYP5 1150 1166 AHCTF1 Protein ELYS yes yes 2;3 4.4887E-05 90.882 By MS/MS By MS/MS 2 2 122890000 65846000 57043000 5517 2417 6147 13854;13855;13856;13857 12648;12649;12650;12651 12651 4855 4 SLPTPAVLLSPTKEPPPLLAKPK NGKANSNKSLPTPAVL PPLLAKPKLDPLKLQQ K S L P K L 2 0 0 0 0 0 1 0 0 0 5 3 0 0 7 2 2 0 0 1 0 0 23 2 2393.4298 Q8WX93 Q8WX93 632 654 PALLD Palladin yes yes 3 0.025413 43.696 By MS/MS By matching 1 1 8032000 4540600 3491400 5518 2411 6148 13858;13859 12652 12652 1 SLPTTVPESPNYR PEPSTIARSLPTTVPE VPESPNYRNTRTPRTP R S L Y R N 0 1 1 0 0 0 1 0 0 0 1 0 0 0 3 2 2 0 1 1 0 0 13 0 1459.7307 Q6PKG0;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 766 778 LARP1 La-related protein 1 yes no 2;3 2.2556E-06 120.55 By MS/MS By MS/MS 3 4 491580000 264590000 226990000 5519 2162 6149;6150 13860;13861;13862;13863;13864;13865;13866 12653;12654;12655;12656;12657;12658;12659 12653 4309;4310;6911 7 SLPTTVPESPNYRNTR PEPSTIARSLPTTVPE SPNYRNTRTPRTPRTP R S L T R T 0 2 2 0 0 0 1 0 0 0 1 0 0 0 3 2 3 0 1 1 0 0 16 1 1830.9224 Q6PKG0;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 766 781 LARP1 La-related protein 1 yes no 2;3 0.00022945 95.067 By MS/MS By MS/MS 2 2 87588000 41121000 46466000 5520 2162 6151 13867;13868;13869;13870 12660;12661;12662;12663 12663 4309;4310;6911;6914 4 SLPTTVPESPNYRNTRTPR PEPSTIARSLPTTVPE YRNTRTPRTPRTPQLK R S L P R T 0 3 2 0 0 0 1 0 0 0 1 0 0 0 4 2 4 0 1 1 0 0 19 2 2185.124 Q6PKG0;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 766 784 LARP1 La-related protein 1 yes no 3 0.013118 50.04 By MS/MS By matching 1 1 12709000 5244800 7464400 5521 2162 6152 13871;13872 12664 12664 4309;4310;6911;6914 1 SLPVSICR TGLNKNRRSLPVSICR SLPVSICRSCETLEGP R S L C R S 0 1 0 0 1 0 0 0 0 1 1 0 0 0 1 2 0 0 0 1 0 0 8 0 930.49569 O94885;A0A087WW74 O94885 813 820 SASH1 SAM and SH3 domain-containing protein 1 yes no 2 0.013447 81.95 By MS/MS By MS/MS 1 1 13326000 7218300 6107600 5522 1467 6153 13873;13874 12665;12666 12665 2720 2 SLPVSVPVWGFK LPTQQYAKSLPVSVPV SVPVWGFKEKRTEARS K S L F K E 0 0 0 0 0 0 0 1 0 0 1 1 0 1 2 2 0 1 0 3 0 0 12 0 1314.7336 Q96B36 Q96B36 183 194 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.0001663 112.84 By MS/MS By MS/MS 1 1 205750000 134630000 71117000 5523 2460 6154 13875;13876 12667;12668 12667 4955 2 SLPVSVPVWGFKEK LPTQQYAKSLPVSVPV PVWGFKEKRTEARSSD K S L E K R 0 0 0 0 0 0 1 1 0 0 1 2 0 1 2 2 0 1 0 3 0 0 14 1 1571.8712 Q96B36 Q96B36 183 196 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 3 0.0020759 69.069 By MS/MS By MS/MS 1 1 2072700 1298300 774400 5524 2460 6155 13877;13878 12669;12670 12669 4955 2 SLQDIIAILGMDELSEEDKLTVSR QKILQDYKSLQDIIAI EDKLTVSRARKIQRFL K S L S R A 1 1 0 3 0 1 3 1 0 3 4 1 1 0 0 3 1 0 0 1 0 0 24 1 2674.3735 P06576;F8W079 P06576 433 456 ATP5B ATP synthase subunit beta, mitochondrial yes no 3 0.00017178 66.383 By MS/MS 1 1378600 0 1378600 5525 1531 6156 13879 12671 12671 181 1 SLQLMDNR TRKAQRPKSLQLMDNR SLQLMDNRLSPFHGSS K S L N R L 0 1 1 1 0 1 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 0 8 0 975.48076 Q9H7D0 Q9H7D0 1766 1773 DOCK5 Dedicator of cytokinesis protein 5 yes yes 2 0.018233 74.533 By MS/MS By MS/MS 1 1 7390600 4026900 3363700 5526 2673 6157 13880;13881 12672;12673 12672 5449 2 SLSAIDRAGAEVK IATGGTPRSLSAIDRA DRAGAEVKSRTTLFRK R S L V K S 3 1 0 1 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 13 1 1315.7096 O95831 O95831 266 278 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.0044146 79.652 By MS/MS By MS/MS 1 1 15999000 9969200 6030000 5527 1503 6158 13882;13883 12674;12675 12674 2788 2 SLSAIDRAGAEVKSR IATGGTPRSLSAIDRA AGAEVKSRTTLFRKIG R S L S R T 3 2 0 1 0 0 1 1 0 1 1 1 0 0 0 3 0 0 0 1 0 0 15 2 1558.8427 O95831 O95831 266 280 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 3 0.029695 50.392 By MS/MS 1 0 0 0 5528 1503 6159 13884 12676 12676 2788 1 SLSAPGNLLTK EGSRREERSLSAPGNL APGNLLTKKPTRECES R S L T K K 1 0 1 0 0 0 0 1 0 0 3 1 0 0 1 2 1 0 0 0 0 0 11 0 1099.6237 F5GZ00;Q96RR4 F5GZ00 296 306 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 yes no 2 0.0025177 89.44 By MS/MS By MS/MS 1 1 6429200 3523000 2906300 5529 866 6160 13885;13886 12677;12678 12677 1555 2 SLSAPLHPEFEEVYR TPRRRMKKSLSAPLHP PEFEEVYRFGAESRKL K S L Y R F 1 1 0 0 0 0 3 0 1 0 2 0 0 1 2 2 0 0 1 1 0 0 15 0 1772.8733 Q53HC0 Q53HC0 209 223 CCDC92 Coiled-coil domain-containing protein 92 yes yes 2;3 0.00032656 94.532 By MS/MS By MS/MS 2 2 48062000 27683000 20379000 5530 2060 6161 13887;13888;13889;13890 12679;12680;12681 12680 4048 3 SLSASPALGSTK IRGRAKSRSLSASPAL SPALGSTKEFRRTRSL R S L T K E 2 0 0 0 0 0 0 1 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1117.5979 O95544 O95544 46 57 NADK NAD kinase yes yes 2 8.1209E-09 135.94 By MS/MS By MS/MS 2 2 38180000 19244000 18936000 5531 1491 6162 13891;13892;13893;13894 12682;12683;12684 12683 2765;2766 3 SLSCLSDLDGGVALEPR GSRKLGPRSLSCLSDL GGVALEPRACRPPGSP R S L P R A 1 1 0 2 1 0 1 2 0 0 4 0 0 0 1 3 0 0 0 1 0 0 17 0 1787.8724 O95685 O95685 23 39 PPP1R3D Protein phosphatase 1 regulatory subunit 3D yes yes 2 0.0053445 61.11 By MS/MS By matching 2 1 5952000 4252500 1699500 5532 1497 6163;6164 13895;13896;13897 12685;12686 12686 2774;2775 2 SLSDNGQPGTPDPADSGGTSAK EEKEYTCKSLSDNGQP DSGGTSAKESECITKP K S L A K E 2 0 1 3 0 1 0 4 0 0 1 1 0 0 3 4 2 0 0 0 0 0 22 0 2057.9138 O75691 O75691 1732 1753 UTP20 Small subunit processome component 20 homolog yes yes 2;3 1.4209E-08 94.958 By MS/MS By MS/MS 3 3 46328000 24790000 21538000 5533 1447 6165;6166 13898;13899;13900;13901;13902;13903 12687;12688;12689;12690;12691 12689 6639 4 SLSDSESDDSK EKDGTKRKSLSDSESD DSESDDSKSKKKRDAA K S L S K S 0 0 0 3 0 0 1 0 0 0 1 1 0 0 0 5 0 0 0 0 0 0 11 0 1168.4732 Q13185;S4R2Y4 Q13185 93 103 CBX3 Chromobox protein homolog 3 yes no 2 1.035E-50 190.66 By MS/MS By MS/MS 4 5 31277000 31277000 0 5534 1902 6167 13904;13905;13906;13907;13908;13909;13910;13911;13912 12692;12693;12694;12695;12696;12697;12698;12699;12700;12701;12702;12703 12703 3637 11 SLSDSESDDSKSK EKDGTKRKSLSDSESD ESDDSKSKKKRDAADK K S L S K K 0 0 0 3 0 0 1 0 0 0 1 2 0 0 0 6 0 0 0 0 0 0 13 1 1383.6001 Q13185;S4R2Y4 Q13185 93 105 CBX3 Chromobox protein homolog 3 yes no 2 2.3315E-15 157.33 By MS/MS By MS/MS 2 2 44555000 21917000 22637000 5535 1902 6168 13913;13914;13915;13916 12704;12705;12706;12707;12708;12709 12705 3637 6 SLSEEVESSESGELPEVDVK EFMLKLMRSLSEEVES ELPEVDVKSEHSGKKV R S L V K S 0 0 0 1 0 0 6 1 0 0 2 1 0 0 1 5 0 0 0 3 0 0 20 0 2147.9958 Q9UKA4 Q9UKA4 1169 1188 AKAP11 A-kinase anchor protein 11 yes yes 2 2.8414E-05 81.854 By MS/MS By MS/MS 1 1 26540000 14205000 12335000 5536 2827 6169 13917;13918 12710;12711 12711 5819;5820 2 SLSELESLKLPAESNEK KHGTALQRSLSELESL LPAESNEKIKQVNERA R S L E K I 1 0 1 0 0 0 4 0 0 0 4 2 0 0 1 4 0 0 0 0 0 0 17 1 1872.968 P22059 P22059 238 254 OSBP Oxysterol-binding protein 1 yes yes 3 0.0068297 55.097 By MS/MS By matching 1 1 3271700 1763700 1508000 5537 1616 6170 13919;13920 12712 12712 2987 1 SLSELESLKLPAESNEKIK KHGTALQRSLSELESL AESNEKIKQVNERATL R S L I K Q 1 0 1 0 0 0 4 0 0 1 4 3 0 0 1 4 0 0 0 0 0 0 19 2 2114.1471 P22059 P22059 238 256 OSBP Oxysterol-binding protein 1 yes yes 3 0.028428 45.659 By MS/MS By matching 1 1 5049700 2005600 3044000 5538 1616 6171 13921;13922 12713 12713 2987 1 SLSEQPVMDTATATEQAK TSQGGVKRSLSEQPVM ATATEQAKQLVKSGAI R S L A K Q 3 0 0 1 0 2 2 0 0 0 1 1 1 0 1 2 3 0 0 1 0 0 18 0 1905.899 P18615;A0A0A0MT02;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 49 66 NELFE Negative elongation factor E yes no 2;3 4.6103E-06 100.97 By MS/MS By MS/MS 4 4 424750000 237890000 186870000 5539 1601 6172;6173 13923;13924;13925;13926;13927;13928;13929;13930 12714;12715;12716;12717;12718;12719;12720 12717 197 2947 7 SLSEQPVMDTATATEQAKQLVK TSQGGVKRSLSEQPVM EQAKQLVKSGAISAIK R S L V K S 3 0 0 1 0 3 2 0 0 0 2 2 1 0 1 2 3 0 0 2 0 0 22 1 2374.205 P18615;A0A0A0MT02;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 49 70 NELFE Negative elongation factor E yes no 2;3 0.00016838 72.899 By MS/MS By MS/MS 2 2 48635000 28883000 19752000 5540 1601 6174 13931;13932;13933;13934 12721;12722;12723 12721 2947 3 SLSESYELSSDLQDK EEAIKRSRSLSESYEL LSSDLQDKQVEMLERK R S L D K Q 0 0 0 2 0 1 2 0 0 0 3 1 0 0 0 5 0 0 1 0 0 0 15 0 1699.7788 A0A087WWK8;Q6DN90 A0A087WWK8 91 105 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2 1.5909E-09 125.36 By MS/MS By MS/MS 1 1 6598400 6598400 0 5541 78 6175 13935;13936 12724;12725 12724 141;142 2 SLSETVTHR SKLSPTKRSLSETVTH LSETVTHRAKIMKIAT R S L H R A 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 2 2 0 0 1 0 0 9 0 1028.5251 A0A1B0GUI1 A0A1B0GUI1 1081 1089 yes yes 2 0.0076255 78.488 By MS/MS By MS/MS 1 1 17051000 8805600 8245600 5542 371 6176 13937;13938 12726;12727 12726 701 2 SLSFPILNPALSQPSQPSSPLPGSHGR VMPSADPRSLSFPILN PLPGSHGRNSPGLGSL R S L G R N 1 1 1 0 0 2 0 2 1 1 4 0 0 1 6 7 0 0 0 0 0 0 27 0 2770.4402 E9PN76;Q8ND24 E9PN76 328 354 RNF214 RING finger protein 214 yes no 3 4.1161E-22 103.34 By MS/MS By MS/MS 1 1 87832000 50559000 37273000 5543 831 6177 13939;13940 12728;12729 12729 1501 2 SLSFSDEMSSCR PPSKRQCRSLSFSDEM SDEMSSCRTSWRPLGS R S L C R T 0 1 0 1 1 0 1 0 0 0 1 0 1 1 0 5 0 0 0 0 0 0 12 0 1404.565 Q14153 Q14153 116 127 FAM53B Protein FAM53B yes yes 2 7.0741E-05 117.27 By MS/MS By MS/MS 1 2 9512600 4590800 4921800 5544 1941 6178;6179 13941;13942;13943 12730;12731;12732;12733 12732 3744 3 SLSFSEPQQPAPAMK SLSPVRSRSLSFSEPQ QQPAPAMKSHLIVTSP R S L M K S 2 0 0 0 0 2 1 0 0 0 1 1 1 1 3 3 0 0 0 0 0 0 15 0 1616.7868 Q9H8N7 Q9H8N7 447 461 ZNF395 Zinc finger protein 395 yes yes 2 0.00036297 101.3 By MS/MS By MS/MS 2 2 13843000 7819600 6023300 5545 2680 6180;6181 13944;13945;13946;13947 12734;12735;12736;12737;12738 12737 354 5469 5 SLSGSPLKVK WCHVHLKKSLSGSPLK SGSPLKVKNSKNSKSP K S L V K N 0 0 0 0 0 0 0 1 0 0 2 2 0 0 1 3 0 0 0 1 0 0 10 1 1014.6073 Q9UIG0 Q9UIG0 345 354 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 1.7358E-05 145.14 By MS/MS By MS/MS 2 2 71614000 35450000 36164000 5546 2817 6182 13948;13949;13950;13951 12739;12740;12741;12742 12741 5792;5793 4 SLSGSPLKVKNSK WCHVHLKKSLSGSPLK PLKVKNSKNSKSPEEH K S L S K N 0 0 1 0 0 0 0 1 0 0 2 3 0 0 1 4 0 0 0 1 0 0 13 2 1343.7773 Q9UIG0 Q9UIG0 345 357 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 3 0.0025956 78.324 By MS/MS By matching 1 1 5388900 2713600 2675200 5547 2817 6183 13952;13953 12743 12743 5792;5793 1 SLSGSSPCPK KSRLSLRRSLSGSSPC SGSSPCPKQKSQTPPR R S L P K Q 0 0 0 0 1 0 0 1 0 0 1 1 0 0 2 4 0 0 0 0 0 0 10 0 1018.4753 Q9UQ35;I3L182;I3L4D8 Q9UQ35 778 787 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.002739 80.245 By MS/MS 1 0 0 0 5548 2877 6184 13954 12744 12744 5972;5973 1 SLSIEIGHEVK RSKVTAIKSLSIEIGH IEIGHEVKTQNKLLAE K S L V K T 0 0 0 0 0 0 2 1 1 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1210.6558 C9JTT8;Q68DU7;H7C1N3;O15155 C9JTT8 48 58 BET1;DKFZp781C0425 BET1 homolog yes no 2;3 8.8406E-06 122.46 By MS/MS By matching 2 2 40387000 22964000 17422000 5549 609 6185 13955;13956;13957;13958 12745;12746;12747 12746 1114 3 SLSKSDSDLLTCSPTEDATMGSR KAELKLSRSLSKSDSD EDATMGSRSESLSNCS R S L S R S 1 1 0 3 1 0 1 1 0 0 3 1 1 0 1 6 3 0 0 0 0 0 23 1 2457.0999 Q92625 Q92625 622 644 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 3 2.9003E-09 86.987 By MS/MS By MS/MS 1 1 11917000 7326700 4590300 5550 2430 6186 13959;13960 12748;12749 12749 4886;4887;4888 2 SLSLDPGQSLEPHPEGPQR QGNRILVKSLSLDPGQ PHPEGPQRLRSDPGPP K S L Q R L 0 1 0 1 0 2 2 2 1 0 3 0 0 0 4 3 0 0 0 0 0 0 19 0 2043.0021 P98174 P98174 114 132 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 3 5.462E-05 79.341 By MS/MS By MS/MS 1 1 18778000 10163000 8615900 5551 1822 6187 13961;13962 12750;12751 12751 3410 2 SLSLEATSPLSAEK SEILSQPKSLSLEATS TSPLSAEKHSCTVPEG K S L E K H 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 4 1 0 0 0 0 0 14 0 1431.7457 H3BN63;Q86YC2 H3BN63 85 98 PALB2 Partner and localizer of BRCA2 yes no 2 0.0012967 133.04 By MS/MS By MS/MS 1 1 4048100 4048100 0 5552 1116 6188 13963;13964 12752;12753 12752 6538 1 SLSLESTDRGSWDP PASPRKTKSLSLESTD TDRGSWDP________ K S L D P - 0 1 0 2 0 0 1 1 0 0 2 0 0 0 1 4 1 1 0 0 0 0 14 1 1548.7056 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25 H0Y7V8 971 984 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha yes no 2 0.0020175 101.62 By MS/MS By MS/MS 2 1 6594700 3286700 3308100 5553 187 6189;6190 13965;13966;13967 12754;12755 12755 330;6268 2 SLSLGDKEISR SVQGSHKRSLSLGDKE LGDKEISRSSPSPALE R S L S R S 0 1 0 1 0 0 1 1 0 1 2 1 0 0 0 3 0 0 0 0 0 0 11 1 1203.6459 Q9UMZ2 Q9UMZ2 1073 1083 SYNRG Synergin gamma yes yes 2 1.0902E-05 139.19 By MS/MS By MS/MS 1 1 146310000 80101000 66205000 5554 2859 6191 13968;13969 12756;12757 12757 5893 2 SLSLLDAFPR TPPPPPRRSLSLLDAF SLLDAFPRIAPIRAAE R S L P R I 1 1 0 1 0 0 0 0 0 0 3 0 0 1 1 2 0 0 0 0 0 0 10 0 1117.6132 A0A087X1Q5 A0A087X1Q5 315 324 SOCS7 yes yes 2 0.0030109 84.479 By MS/MS By MS/MS 1 1 1368200 1368200 0 5555 141 6192 13970;13971 12758;12759 12758 244 2 SLSLQPQLTQR PRLSTRPRSLSLQPQL LQPQLTQRSGLQ____ R S L Q R S 0 1 0 0 0 3 0 0 0 0 3 0 0 0 1 2 1 0 0 0 0 0 11 0 1269.7041 P21731 P21731 329 339 TBXA2R Thromboxane A2 receptor yes yes 2 0.0044801 77.74 By MS/MS By MS/MS 1 1 3932400 2184600 1747800 5556 1614 6193 13972;13973 12760;12761;12762 12761 2981 3 SLSMDSQVPVYSPSIDLK LVKSLLRRSLSMDSQV YSPSIDLKSSQGSSSV R S L L K S 0 0 0 2 0 1 0 0 0 1 2 1 1 0 2 5 0 0 1 2 0 0 18 0 1964.9765 Q9ULJ3 Q9ULJ3 343 360 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2 7.4162E-06 97.214 By MS/MS By matching 1 1 12815000 6933000 5882300 5557 2847 6194 13974;13975 12763;12764 12763 371 5859;5860 2 SLSMVDLQDAR LQMANGGKSLSMVDLQ MVDLQDARTLDGEAGS K S L A R T 1 1 0 2 0 1 0 0 0 0 2 0 1 0 0 2 0 0 0 1 0 0 11 0 1233.6023 H0Y3A3;Q5VWQ8 H0Y3A3 654 664 DAB2IP Disabled homolog 2-interacting protein yes no 2 0.003699 80.318 By MS/MS By matching 1 1 3254900 1309200 1945700 5558 1012 6195 13976;13977 12765 12765 122 1868 1 SLSNSNPDISGTPTSPDDEVR SLNLNRSRSLSNSNPD TSPDDEVRSIIGSKGL R S L V R S 0 1 2 3 0 0 1 1 0 1 1 0 0 0 3 5 2 0 0 1 0 0 21 0 2186.9927 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 896 916 DOCK7 Dedicator of cytokinesis protein 7 yes no 2;3 0.00063266 72.644 By MS/MS By MS/MS 3 3 86876000 48580000 38295000 5559 2519 6196 13978;13979;13980;13981;13982;13983 12766;12767;12768;12769;12770;12771 12769 5086;5087;5088 6 SLSPGGAALGYR PGGGGGQRSLSPGGAA GGAALGYRDYRLQQLA R S L Y R D 2 1 0 0 0 0 0 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 12 0 1147.5986 A0A087WWP4;Q96T37 A0A087WWP4 248 259 RBM15 Putative RNA-binding protein 15 yes no 2 0.0024467 88.495 By MS/MS By MS/MS 1 1 335360000 173680000 161680000 5560 81 6197 13984;13985 12772;12773 12773 152 2 SLSPGKENVSALDMEK IEPDKECKSLSPGKEN VSALDMEKESEEKEEK K S L E K E 1 0 1 1 0 0 2 1 0 0 2 2 1 0 1 3 0 0 0 1 0 0 16 1 1703.84 Q9H307 Q9H307 441 456 PNN Pinin yes yes 3 0.00044423 79.346 By MS/MS By MS/MS 1 1 3815200 1748900 2066300 5561 2651 6198 13986;13987 12774;12775 12774 5406 2 SLSPILPGR ESTSRNRRSLSPILPG LSPILPGRHSPAPPPD R S L G R H 0 1 0 0 0 0 0 1 0 1 2 0 0 0 2 2 0 0 0 0 0 0 9 0 938.55492 M0QZS0;A0A087WZG4;Q6ZSZ5 M0QZS0 740 748 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes no 2 0.001703 139.38 By MS/MS By MS/MS 1 1 6712800 3742000 2970800 5562 111 6199 13988;13989 12776;12777 12776 203 2 SLSPLIK TSIGERKRSLSPLIKF RSLSPLIKFSPVEQRL R S L I K F 0 0 0 0 0 0 0 0 0 1 2 1 0 0 1 2 0 0 0 0 0 0 7 0 756.47454 Q5VY60;Q7Z4H7 Q5VY60 770 776 HAUS6 HAUS augmin-like complex subunit 6 yes no 2 0.012161 102.51 By MS/MS 1 0 0 0 5563 2122 6200 13990 12778 12778 4215 1 SLSPLIKFSPVEQR TSIGERKRSLSPLIKF KFSPVEQRLRTTIACS R S L Q R L 0 1 0 0 0 1 1 0 0 1 2 1 0 1 2 3 0 0 0 1 0 0 14 1 1599.8984 Q5VY60;Q7Z4H7 Q5VY60 770 783 HAUS6 HAUS augmin-like complex subunit 6 yes no 2 0.027434 56.569 By matching By MS/MS 1 1 3811900 1653400 2158500 5564 2122 6201 13991;13992 12779 12779 4215 1 SLSPNHNTLQTLK LRSDSHSRSLSPNHNT HNTLQTLKSDGRMPSS R S L L K S 0 0 2 0 0 1 0 0 1 0 3 1 0 0 1 2 2 0 0 0 0 0 13 0 1451.7732 O75592 O75592 2749 2761 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 3 0.0066989 62.081 By MS/MS By MS/MS 1 1 8842000 4923600 3918400 5565 1444 6202 13993;13994 12780;12781 12780 2674 2 SLSPSHLTEDR VVRPQESRSLSPSHLT PSHLTEDRQGRWKEED R S L D R Q 0 1 0 1 0 0 1 0 1 0 2 0 0 0 1 3 1 0 0 0 0 0 11 0 1240.6048 Q5T200 Q5T200 875 885 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2;3 0.0020544 92.295 By MS/MS By MS/MS 2 2 92928000 45331000 47597000 5566 2094 6203 13995;13996;13997;13998 12782;12783;12784;12785 12784 4139 4 SLSPVAAPPLREPR GGYQYKQRSLSPVAAP APPLREPRARHAAAAF R S L P R A 2 2 0 0 0 0 1 0 0 0 2 0 0 0 4 2 0 0 0 1 0 0 14 1 1488.8413 Q8NDT2 Q8NDT2 265 278 RBM15B Putative RNA-binding protein 15B yes yes 2;3 0.00038364 94.122 By MS/MS By MS/MS 2 2 51024000 32624000 18400000 5567 2345 6204 13999;14000;14001;14002 12786;12787;12788 12787 4704 3 SLSQGSTNSNMLDVQGGAHK PAMMFRQRSLSQGSTN DVQGGAHKKRARRSSL R S L H K K 1 0 2 1 0 2 0 3 1 0 2 1 1 0 0 4 1 0 0 1 0 0 20 0 2029.9487 B7Z7Y1;E9PCH4;Q8TEU7 B7Z7Y1 1068 1087 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 2;3 3.0186E-08 89.669 By MS/MS By MS/MS 3 3 40485000 22821000 17664000 5568 516 6205;6206 14003;14004;14005;14006;14007;14008 12789;12790;12791;12792;12793;12794 12792 958;959 6 SLSQPTPPPMPILSQSEAK KSRSGGRKSLSQPTPP ILSQSEAKNPRINQLS K S L A K N 1 0 0 0 0 2 1 0 0 1 2 1 1 0 5 4 1 0 0 0 0 0 19 0 2007.0347 H0Y390;H3BPE1;H3BQK9;Q9UPN3;H0Y314 H0Y390 4013 4031 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 0.011239 55.33 By MS/MS By matching 1 1 7263500 3691100 3572400 5569 1011 6207 14009;14010 12795 12795 1863 1 SLSQSFENLLDEPAYGLIQK LLVNCQNKSLSQSFEN PAYGLIQKIKKDPYTA K S L Q K I 1 0 1 1 0 2 2 1 0 1 4 1 0 1 1 3 0 0 1 0 0 0 20 0 2251.1372 C9JA93 C9JA93 102 121 TBC1D15 yes yes 2;3 6.1123E-26 135.58 By MS/MS 2 14622000 14622000 0 5570 579 6208 14011;14012 12796;12797 12796 7318 2 SLSRPSSLIEQEK LSERALTRSLSRPSSL SSLIEQEKQRSLEKQR R S L E K Q 0 1 0 0 0 1 2 0 0 1 2 1 0 0 1 4 0 0 0 0 0 0 13 1 1472.7835 Q12802;A0A087WTD7;A8MYJ1 Q12802 2561 2573 AKAP13 A-kinase anchor protein 13 yes no 2 0.0017416 97.631 By MS/MS 1 11589000 11589000 0 5571 1877 6209 14013 12798 12798 3563;3564 1 SLSRPSSLIEQEKQR LSERALTRSLSRPSSL LIEQEKQRSLEKQRQD R S L Q R S 0 2 0 0 0 2 2 0 0 1 2 1 0 0 1 4 0 0 0 0 0 0 15 2 1756.9432 Q12802;A0A087WTD7;A8MYJ1 Q12802 2561 2575 AKAP13 A-kinase anchor protein 13 yes no 3 0.0015345 75.239 By MS/MS By matching 1 1 16335000 9801500 6533200 5572 1877 6210 14014;14015 12799 12799 3563;3564 1 SLSSGSNFCSEQK SLVKKKERSLSSGSNF SNFCSEQKTSGIINKF R S L Q K T 0 0 1 0 1 1 1 1 0 0 1 1 0 1 0 5 0 0 0 0 0 0 13 0 1429.6144 O95243 O95243 316 328 MBD4 Methyl-CpG-binding domain protein 4 yes yes 2 1.9186E-10 135.91 By MS/MS By MS/MS 1 1 12351000 7155000 5196300 5573 1481 6211 14016;14017 12800;12801 12800 2739 2 SLSSPTVTLSAPLEGAK EPQIRRPRSLSSPTVT SAPLEGAKDSPVRRAV R S L A K D 2 0 0 0 0 0 1 1 0 0 3 1 0 0 2 4 2 0 0 1 0 0 17 0 1656.8934 A0A1B0GVY1;Q96PU5 A0A1B0GVY1 725 741 NEDD4L E3 ubiquitin-protein ligase NEDD4-like yes no 2 9.5216E-46 174.59 By MS/MS By MS/MS 1 1 57852000 30065000 27787000 5574 380 6212 14018;14019 12802;12803 12802 719;720 2 SLSSPTVTLSAPLEGAKDSPVR EPQIRRPRSLSSPTVT GAKDSPVRRAVKDTLS R S L V R R 2 1 0 1 0 0 1 1 0 0 3 1 0 0 3 5 2 0 0 2 0 0 22 1 2211.1747 A0A1B0GVY1;Q96PU5 A0A1B0GVY1 725 746 NEDD4L E3 ubiquitin-protein ligase NEDD4-like yes no 3 7.7013E-10 99.092 By MS/MS 1 8227200 8227200 0 5575 380 6213 14020 12804 12804 719;720 1 SLSSPTVTLSAPLEGAKDSPVRR EPQIRRPRSLSSPTVT AKDSPVRRAVKDTLSN R S L R R A 2 2 0 1 0 0 1 1 0 0 3 1 0 0 3 5 2 0 0 2 0 0 23 2 2367.2758 A0A1B0GVY1;Q96PU5 A0A1B0GVY1 725 747 NEDD4L E3 ubiquitin-protein ligase NEDD4-like yes no 3 0.022675 44.625 By MS/MS By matching 1 1 29713000 15908000 13805000 5576 380 6214 14021;14022 12805 12805 719;720 1 SLSSSLDDTEVK TETPIVSKSLSSSLDD SLDDTEVKKVMEECKR K S L V K K 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 4 1 0 0 1 0 0 12 0 1279.6143 O95292 O95292 156 167 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 5.9077E-10 146.67 By MS/MS By MS/MS 1 1 54635000 28890000 25744000 5577 1483 6215 14023;14024 12806;12807 12807 2745;2746;2747 2 SLSSSLDDTEVKK TETPIVSKSLSSSLDD LDDTEVKKVMEECKRL K S L K K V 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 4 1 0 0 1 0 0 13 1 1407.7093 O95292 O95292 156 168 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2;3 0.0040624 68.676 By MS/MS By MS/MS 3 2 50059000 28089000 21970000 5578 1483 6216 14025;14026;14027;14028;14029 12808;12809;12810;12811 12811 2745;2746;2747 3 SLSSSPQAQPPRPAELSDEEVAELFQR ESSAVPARSLSSSPQA EVAELFQRLAETQQEK R S L Q R L 3 2 0 1 0 3 4 0 0 0 3 0 0 1 4 5 0 0 0 1 0 0 27 1 2967.4574 A0A087WXA6;A0A087WT45;A0A075B793;Q4V328 A0A087WXA6 267 293 GRIPAP1 GRIP1-associated protein 1 yes no 3 0.0010101 56.009 By MS/MS By matching 1 1 25128000 12873000 12256000 5579 15 6217 14030;14031 12812;12813 12812 32;33 2 SLSTNGENMGLAVQYLDPR FTLVPSSRSLSTNGEN AVQYLDPRGRLRSADS R S L P R G 1 1 2 1 0 1 1 2 0 0 3 0 1 0 1 2 1 0 1 1 0 0 19 0 2063.9946 J3KRN4;J3QRB6;Q99759 J3KRN4 310 328 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 2 1.5515E-06 101.28 By MS/MS By MS/MS 1 1 16746000 10628000 6117700 5580 1240 6218 14032;14033 12814;12815 12814 2249;6565 2 SLSTSGESLYHVLGLDK ________________ YHVLGLDKNATSDDIK R S L D K N 0 0 0 1 0 0 1 2 1 0 4 1 0 0 0 4 1 0 1 1 0 0 17 0 1804.9207 Q9H3Z4 Q9H3Z4 8 24 DNAJC5 DnaJ homolog subfamily C member 5 yes yes 2 1.2763E-21 140.68 By MS/MS By MS/MS 1 1 25856000 18409000 7446700 5581 2656 6219 14034;14035 12816;12817 12816 5418 2 SLSTSGESLYHVLGLDKNATSDDIKK ________________ ATSDDIKKSYRKLALK R S L K K S 1 0 1 3 0 0 1 2 1 1 4 3 0 0 0 5 2 0 1 1 0 0 26 2 2777.4083 Q9H3Z4 Q9H3Z4 8 33 DNAJC5 DnaJ homolog subfamily C member 5 yes yes 4 5.3041E-08 81.055 By matching By MS/MS 1 1 11908000 4235200 7673100 5582 2656 6220 14036;14037 12818 12818 5418 1 SLSVPAASTAKPPPLPR HRDTALYKSLSVPAAS AKPPPLPRSNTVASFS K S L P R S 3 1 0 0 0 0 0 0 0 0 2 1 0 0 5 3 1 0 0 1 0 0 17 1 1687.9621 P49815;H3BMQ0 P49815 1252 1268 TSC2 Tuberin yes no 3 0.0036227 59.513 By MS/MS By MS/MS 1 1 8749300 4649800 4099500 5583 1731 6221 14038;14039 12819;12820;12821;12822;12823 12822 3271 5 SLSVPDSGR NLLPTMSRSLSVPDSG LSVPDSGRLWDVHTSA R S L G R L 0 1 0 1 0 0 0 1 0 0 1 0 0 0 1 3 0 0 0 1 0 0 9 0 916.46141 O75420 O75420 636 644 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 2 0.011792 72.2 By MS/MS By MS/MS 1 1 16388000 8741600 7646800 5584 1439 6222 14040;14041 12824;12825 12825 2656 2 SLSVPVDLSR PPSKRHCRSLSVPVDL SVPVDLSRWQPVWRPA R S L S R W 0 1 0 1 0 0 0 0 0 0 2 0 0 0 1 3 0 0 0 2 0 0 10 0 1071.5924 Q9NYF3;D6RHW3 Q9NYF3 120 129 FAM53C Protein FAM53C yes no 2 0.0017795 95.477 By MS/MS By MS/MS 1 1 31489000 16309000 15180000 5585 2757 6223 14042;14043 12826;12827 12827 5639 2 SLSYEEPR PIRQGVVRSLSYEEPR SLSYEEPRRHSPPIEK R S L P R R 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 2 0 0 1 0 0 0 8 0 979.46108 F5GZK9;Q8IZD4 F5GZK9 147 154 DCP1B mRNA-decapping enzyme 1B yes no 2 0.0051709 112.11 By MS/MS By MS/MS 1 1 66472000 36617000 29855000 5586 868 6224 14044;14045 12828;12829 12829 1563 2 SLSYSPVER IDSLRDSRSLSYSPVE LSYSPVERRRPSPQPS R S L E R R 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 1 1 0 0 9 0 1036.5189 Q9UQ35;I3L4U6 Q9UQ35 2690 2698 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.029229 55.98 By MS/MS By matching 1 1 98044000 53681000 44363000 5587 2877 6225 14046;14047 12830 12830 1 SLTAHSLLPLAEK PEPLRRHRSLTAHSLL SLLPLAEKQRRVLRNL R S L E K Q 2 0 0 0 0 0 1 0 1 0 4 1 0 0 1 2 1 0 0 0 0 0 13 0 1378.782 F2Z2E2;Q86VI3 F2Z2E2 1381 1393 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes no 2 1.5087E-28 179.5 By MS/MS By MS/MS 1 1 8666900 3727200 4939700 5588 847 6226 14048;14049 12831;12832 12831 1530;6456 2 SLTDPSQESHTEAISDAETSSSDISFSGIATR GARRSKAKSLTDPSQE SFSGIATRRTRSMQRK K S L T R R 3 1 0 3 0 1 3 1 1 3 1 0 0 1 1 9 4 0 0 0 0 0 32 0 3325.507 J3KP30;Q5QJE6 J3KP30 170 201 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 3 5.9482E-07 71.903 By MS/MS By MS/MS 1 1 16412000 8286700 8125800 5589 1229 6227 14050;14051 12833;12834 12834 2224;2225;2226;6561 2 SLTDSCLFEK ASLVGLPKSLTDSCLF TDSCLFEKSGYEEDNE K S L E K S 0 0 0 1 1 0 1 0 0 0 2 1 0 1 0 2 1 0 0 0 0 0 10 0 1198.554 Q9UKA4 Q9UKA4 1483 1492 AKAP11 A-kinase anchor protein 11 yes yes 2 0.00044438 117.14 By matching By MS/MS 1 1 3534200 1890400 1643800 5590 2827 6228 14052;14053 12835 12835 7091 1 SLTEISTDFDRSSPPLQPPPVNSLTTENR EVAEDPAKSLTEISTD NSLTTENRFHSLPFSL K S L N R F 0 2 2 2 0 1 2 0 0 1 3 0 0 1 5 5 4 0 0 1 0 0 29 1 3197.5841 J3KRR7;Q9NQC7 J3KRR7 384 412 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD yes no 3 0.020687 40.094 By matching By MS/MS 1 1 16415000 9328400 7086700 5591 1241 6229 14054;14055 12836 12836 2250 1 SLTNDWEDHLAVK EEYGEFYKSLTNDWED WEDHLAVKHFSVEGQL K S L V K H 1 0 1 2 0 0 1 0 1 0 2 1 0 0 0 1 1 1 0 1 0 0 13 0 1526.7365 P07900;P08238 P08238 307 319 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 3 0.00093084 100.38 By MS/MS By MS/MS 1 1 3840100 1573200 2266900 5592 1542;1540 6230 14056;14057 12837;12838;12839 12838 3 SLTNLSFLTDSEK ASNLRKQKSLTNLSFL SFLTDSEKKLQLYEPE K S L E K K 0 0 1 1 0 0 1 0 0 0 3 1 0 1 0 3 2 0 0 0 0 0 13 0 1453.73 A0A0A0MRJ3;Q8NEY1 Q8NEY1 103 115 NAV1 Neuron navigator 1 no no 2 5.819E-12 148.7 By MS/MS By MS/MS 1 1 9146500 4869200 4277300 5593 188;2350 6231 14058;14059 12840;12841;12842 12840 333 3 SLTNLSFLTDSEKK ASNLRKQKSLTNLSFL FLTDSEKKLQLYEPEW K S L K K L 0 0 1 1 0 0 1 0 0 0 3 2 0 1 0 3 2 0 0 0 0 0 14 1 1581.825 A0A0A0MRJ3;Q8NEY1 Q8NEY1 103 116 NAV1 Neuron navigator 1 no no 2 0.021715 73.834 By matching By MS/MS 1 1 6991700 4367500 2624200 5594 188;2350 6232 14060;14061 12843 12843 333 1 SLTNSHLEK ISDRESRRSLTNSHLE LTNSHLEKKKCDEYIP R S L E K K 0 0 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 9 0 1027.5298 F8VX12;F8VX04;Q9H2H9 F8VX12 52 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 2 0.0011249 150.09 By MS/MS By MS/MS 2 2 116910000 54323000 62583000 5595 924 6233;6234 14062;14063;14064;14065 12844;12845;12846;12847;12848;12849 12845 1658;1659;6474 6 SLTNSHLEKK ISDRESRRSLTNSHLE TNSHLEKKKCDEYIPG R S L K K K 0 0 1 0 0 0 1 0 1 0 2 2 0 0 0 2 1 0 0 0 0 0 10 1 1155.6248 F8VX12;F8VX04;Q9H2H9 F8VX12 52 61 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 3 0.013058 53.754 By MS/MS By MS/MS 1 1 7014500 3318200 3696300 5596 924 6235 14066;14067 12850;12851 12851 1658;1659;6474 2 SLTQNSAPSRSYLR RLYNTRGKSLTQNSAP APSRSYLRKNPDKFHG K S L L R K 1 2 1 0 0 1 0 0 0 0 2 0 0 0 1 4 1 0 1 0 0 0 14 1 1578.8114 F5H6R4;P17031 F5H6R4 114 127 ZNF26 Zinc finger protein 26 yes no 2 0.023663 48.741 By MS/MS 1 0 0 0 5597 894 6236 14068 12852 12852 7404 1 SLTRSPPAIR PRTARGKRSLTRSPPA TRSPPAIRRRSASGSS R S L I R R 1 2 0 0 0 0 0 0 0 1 1 0 0 0 2 2 1 0 0 0 0 0 10 1 1096.6353 Q9UQ35 Q9UQ35 2067 2076 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0019055 96.067 By MS/MS By matching 1 1 53489000 30982000 22507000 5598 2877 6237 14069;14070 12853 12853 5974;5975;7109 1 SLTSSLENIFSR ILKNKAKRSLTSSLEN SLENIFSRGANRMRGR R S L S R G 0 1 1 0 0 0 1 0 0 1 2 0 0 1 0 4 1 0 0 0 0 0 12 0 1352.6936 O60343;Q5JU47 O60343 566 577 TBC1D4 TBC1 domain family member 4 yes no 2 6.9801E-20 170.18 By MS/MS By MS/MS 2 2 104320000 67424000 36898000 5599 1407 6238 14071;14072;14073;14074 12854;12855;12856;12857 12854 2593;2594 4 SLTVSDDAESSEPER RRGRKPKRSLTVSDDA AESSEPERKRQKSVSD R S L E R K 1 1 0 2 0 0 3 0 0 0 1 0 0 0 1 4 1 0 0 1 0 0 15 0 1620.7115 Q8NFC6;H0Y9Y2 Q8NFC6 2954 2968 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 no no 2 5.3441E-06 115.26 By MS/MS By MS/MS 2 2 16843000 9690200 7152300 5600 2353;1048 6239 14075;14076;14077;14078 12858;12859;12860;12861 12860 1946;1947;1948;6521 4 SLVESVSSSPNKESNEEEQVWHFLGK RCTQEEARSLVESVSS QVWHFLGK________ R S L G K - 0 0 2 0 0 1 5 1 1 0 2 2 0 1 1 6 0 1 0 3 0 0 26 1 2945.4043 Q9H2U2 Q9H2U2 309 334 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 3 2.2379E-05 69.052 By MS/MS By MS/MS 1 1 32324000 23354000 8969400 5601 2648 6240 14079;14080 12862;12863 12862 5397;5398 2 SLVGSWLK RSLSGTGRSLVGSWLK SLVGSWLKLNRADGNF R S L L K L 0 0 0 0 0 0 0 1 0 0 2 1 0 0 0 2 0 1 0 1 0 0 8 0 888.5069 B0QY16;Q6ICG6 B0QY16 243 250 KIAA0930 Uncharacterized protein KIAA0930 yes no 2 0.0068366 99.568 By matching By MS/MS 1 1 8971800 5112900 3858800 5602 443 6241 14081;14082 12864 12864 869 1 SLVGTPYWMAPELISR SKEVPRRKSLVGTPYW MAPELISRLPYGPEVD K S L S R L 1 1 0 0 0 0 1 1 0 1 2 0 1 0 2 2 1 1 1 1 0 0 16 0 1818.9338 O96013;M0R1R1 O96013 474 489 PAK4 Serine/threonine-protein kinase PAK 4 yes no 2 0.00018401 99.747 By MS/MS By MS/MS 2 2 27798000 18048000 9750100 5603 1506 6242;6243 14083;14084;14085;14086 12865;12866 12865 178 2794 2 SLVSKGTLVQTK SRIKLGLKSLVSKGTL KGTLVQTKGTGASGSF K S L T K G 0 0 0 0 0 1 0 1 0 0 2 2 0 0 0 2 2 0 0 2 0 0 12 1 1259.7449 P16402;P16403;Q02539;P16401;P10412 P10412 86 97 HIST1H1D;HIST1H1C;HIST1H1A;HIST1H1B;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.1;Histone H1.5;Histone H1.4 no no 2 0.022797 85.536 By matching By MS/MS 1 1 8006900 4034200 3972700 5604 1556;1586 6244 14087;14088 12867 12867 1 SLVSVTK QLKEFDGKSLVSVTKE KSLVSVTKEGLELPED K S L T K E 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 2 1 0 0 2 0 0 7 0 732.43815 P08238;Q58FF8;Q58FF7 P08238 532 538 HSP90AB1;HSP90AB2P;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Putative heat shock protein HSP 90-beta-3 yes no 2 0.017257 102.71 By MS/MS 1 0 0 0 5605 1542 6245 14089 12868 12868 1 SLYASSPGGVYATR ALRPSTSRSLYASSPG PGGVYATRSSAVRLRS R S L T R S 2 1 0 0 0 0 0 2 0 0 1 0 0 0 1 3 1 0 2 1 0 0 14 0 1427.7045 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 P08670 51 64 VIM Vimentin yes no 2;3 1.9414E-35 174.57 By MS/MS By MS/MS 4 5 724920000 417020000 307900000 5606 1546 6246;6247 14090;14091;14092;14093;14094;14095;14096;14097;14098 12869;12870;12871;12872;12873;12874;12875;12876;12877;12878 12870 2844;2845;7555;7556 10 SLYDEVAAQGEVVR SASILESKSLYDEVAA AAQGEVVRKLKAEKSP K S L V R K 2 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 3 0 0 14 0 1534.7627 P07814;V9GYZ6 P07814 825 838 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2 4.1323E-14 138.45 By MS/MS 1 11045000 11045000 0 5607 1539 6248 14099 12879 12879 7550 1 SLYDEVAAQGEVVRK SASILESKSLYDEVAA AQGEVVRKLKAEKSPK K S L R K L 2 1 0 1 0 1 2 1 0 0 1 1 0 0 0 1 0 0 1 3 0 0 15 1 1662.8577 P07814;V9GYZ6 P07814 825 839 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2 0.0097778 71.806 By MS/MS By MS/MS 1 1 8169500 3747400 4422100 5608 1539 6249 14100;14101 12880;12881 12880 7550 2 SLYESFVSSSDR SSRRPQRKSLYESFVS SFVSSSDRLRELGPDG K S L D R L 0 1 0 1 0 0 1 0 0 0 1 0 0 1 0 5 0 0 1 1 0 0 12 0 1375.6256 P18615;A0A0A0MT02;A2ABK4 P18615 131 142 NELFE Negative elongation factor E yes no 2 0.00010734 115.57 By MS/MS By MS/MS 1 1 5251600 2273500 2978100 5609 1601 6250 14102;14103 12882;12883 12882 2951 2 SLYPSSEIQLNNK KQQHTETKSLYPSSEI SEIQLNNKVARKVRAL K S L N K V 0 0 2 0 0 1 1 0 0 1 2 1 0 0 1 3 0 0 1 0 0 0 13 0 1491.7569 O75886 O75886 190 202 STAM2 Signal transducing adapter molecule 2 yes yes 2 0.0095218 60.518 By matching By MS/MS 1 1 5476500 2736600 2739900 5610 1449 6251 14104;14105 12884;12885 12885 7534 2 SLYTSMARPPLPR GSQRSNQKSLYTSMAR MARPPLPRQQSTSSDR K S L P R Q 1 2 0 0 0 0 0 0 0 0 2 0 1 0 3 2 1 0 1 0 0 0 13 1 1487.7919 Q12965 Q12965 987 999 MYO1E Unconventional myosin-Ie yes yes 3 0.0017314 74.962 By MS/MS By MS/MS 1 1 4248400 2050100 2198400 5611 1888 6252 14106;14107 12886;12887 12886 7681 2 SMDAMSSPTKTETVK ESKEEVLKSMDAMSSP PTKTETVKAQAESNKA K S M V K A 1 0 0 1 0 0 1 0 0 0 0 2 2 0 1 3 3 0 0 1 0 0 15 1 1611.7484 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 1536 1550 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 0.00061383 88.561 By MS/MS By MS/MS 1 1 8459700 4885700 3574000 5612 1011 6253 14108;14109 12888;12889 12888 1864 2 SMDELNHDFQALALEGR IHAEHQVRSMDELNHD QALALEGRAMGEQLLP R S M G R A 2 1 1 2 0 1 2 1 1 0 3 0 1 1 0 1 0 0 0 0 0 0 17 0 1944.9 Q5T1Z4;Q5T1Z8;Q14671;E9PR38;H0YEH2 Q5T1Z4 124 140 PUM1 Pumilio homolog 1 yes no 3 0.0055814 56.48 By MS/MS By matching 1 1 4486000 2803200 1682800 5613 1950 6254 14110;14111 12890 12890 3767 1 SMDLGIADETK FVKTRKSKSMDLGIAD LGIADETKLNTVDDQK K S M T K L 1 0 0 2 0 0 1 1 0 1 1 1 1 0 0 1 1 0 0 0 0 0 11 0 1178.5489 Q5VWV2;Q8TEW0 Q5VWV2 792 802 PARD3 Partitioning defective 3 homolog yes no 2 0.0012327 100.02 By MS/MS 1 2394500 2394500 0 5614 2121 6255 14112 12891 12891 4212 1 SMEVLSVTDGGSPVPAR GKRRPERKSMEVLSVT GGSPVPARRAIEMAQH K S M A R R 1 1 0 1 0 0 1 2 0 0 1 0 1 0 2 3 1 0 0 3 0 0 17 0 1700.8403 Q8IWQ3 Q8IWQ3 382 398 BRSK2 Serine/threonine-protein kinase BRSK2 yes yes 2 0.00044336 78.326 By MS/MS By MS/MS 1 1 4146500 2570600 1576000 5615 2270 6256 14113;14114 12892;12893 12893 4561;4562 2 SMEVLSVTDGGSPVPARR GKRRPERKSMEVLSVT GSPVPARRAIEMAQHG K S M R R A 1 2 0 1 0 0 1 2 0 0 1 0 1 0 2 3 1 0 0 3 0 0 18 1 1856.9414 Q8IWQ3 Q8IWQ3 382 399 BRSK2 Serine/threonine-protein kinase BRSK2 yes yes 3 1.9529E-07 109.55 By MS/MS By MS/MS 2 2 15747000 8677800 7069600 5616 2270 6257;6258 14115;14116;14117;14118 12894;12895;12896 12894 305 4561;4562 3 SMGLEVVLMTGDNSK ELAIHILKSMGLEVVL LMTGDNSKTARSIASQ K S M S K T 0 0 1 1 0 0 1 2 0 0 2 1 2 0 0 2 1 0 0 2 0 0 15 0 1579.7586 Q04656 Q04656 1245 1259 ATP7A Copper-transporting ATPase 1 yes yes 2 0.029839 40.187 By MS/MS 1 0 0 0 5617 1849 6259 14119 12897 12897 1 SMGTGDTPGLEVPSSPLR TRTRPVTRSMGTGDTP EVPSSPLRKAKRARLC R S M L R K 0 1 0 1 0 0 1 3 0 0 2 0 1 0 3 3 2 0 0 1 0 0 18 0 1799.8724 C9J0I9;Q86WB0 C9J0I9 338 355 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 5.1314E-97 201.04 By MS/MS By MS/MS 2 2 149870000 82423000 67448000 5618 551 6260;6261 14120;14121;14122;14123 12898;12899;12900;12901 12899 59 1005;1006 4 SMGTGDTPGLEVPSSPLRK TRTRPVTRSMGTGDTP VPSSPLRKAKRARLCS R S M R K A 0 1 0 1 0 0 1 3 0 0 2 1 1 0 3 3 2 0 0 1 0 0 19 1 1927.9673 C9J0I9;Q86WB0 C9J0I9 338 356 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 4.1454E-28 140.12 By MS/MS By MS/MS 4 4 266840000 152620000 114220000 5619 551 6262;6263 14124;14125;14126;14127;14128;14129;14130;14131 12902;12903;12904;12905;12906;12907;12908;12909 12903 59 1005;1006 8 SMKDTSIQEVVSRPSSK DLKNFRQKSMKDTSIQ VVSRPSSKRMTSHTTK K S M S K R 0 1 0 1 0 1 1 0 0 1 0 2 1 0 1 5 1 0 0 2 0 0 17 2 1877.9517 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 776 792 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.021586 45.879 By MS/MS By matching 1 1 29084000 19136000 9948100 5620 195 6264 14132;14133 12910 12910 1 SMMSPMAER RSMMSYERSMMSPMAE MMSPMAERSMMSAYER R S M E R S 1 1 0 0 0 0 1 0 0 0 0 0 3 0 1 2 0 0 0 0 0 0 9 0 1038.4297 P18583;H7C1M2 P18583 1023 1031 SON Protein SON yes no 2 0.0035724 91.313 By MS/MS By MS/MS 1 1 13953000 7828800 6123900 5621 1600 6265 14134;14135 12911;12912 12911 2944 2 SMNPNVSMVSSASSSPSSSR IYQDERERSMNPNVSM SSSPSSSRTPQAKTST R S M S R T 1 1 2 0 0 0 0 0 0 0 0 0 2 0 2 10 0 0 0 2 0 0 20 0 1997.8783 C9JR56;Q9UPW6 C9JR56 381 400 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 yes no 2 0.017282 49.655 By MS/MS By matching 1 1 4620200 2823400 1796900 5622 604 6266 14136;14137 12913 12913 1100 1 SMSAPVIFDR IAPRIESKSMSAPVIF SAPVIFDRSREEIEEE K S M D R S 1 1 0 1 0 0 0 0 0 1 0 0 1 1 1 2 0 0 0 1 0 0 10 0 1121.5539 O60749;D6RC15 O60749 117 126 SNX2 Sorting nexin-2 yes no 2 1.1762E-13 167.11 By MS/MS By MS/MS 4 4 40992000 21838000 19154000 5623 1419 6267;6268 14138;14139;14140;14141;14142;14143;14144;14145 12914;12915;12916;12917;12918;12919;12920 12920 171 2611;2612 7 SMSASSGLSAR KSRPEPGRSMSASSGL ASSGLSARSSAQNGSA R S M A R S 2 1 0 0 0 0 0 1 0 0 1 0 1 0 0 5 0 0 0 0 0 0 11 0 1052.4921 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25 H0Y7V8 879 889 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha yes no 2 0.0012589 99.732 By MS/MS By MS/MS 1 1 14043000 6467400 7575900 5624 187 6269 14146;14147 12921;12922 12922 331 2 SMSFQGIR LLLSVQKRSMSFQGIR SMSFQGIRQPVTVTEL R S M I R Q 0 1 0 0 0 1 0 1 0 1 0 0 1 1 0 2 0 0 0 0 0 0 8 0 924.44874 P15924 P15924 2207 2214 DSP Desmoplakin yes yes 2 0.0078389 94.262 By MS/MS By MS/MS 1 2 14180000 5272000 8907700 5625 1582 6270;6271 14148;14149;14150 12923;12924;12925 12923 195 2909;2910 3 SMSHQAAIASQR RKGDIVRKSMSHQAAI QAAIASQRFEGTTSLG K S M Q R F 3 1 0 0 0 2 0 0 1 1 0 0 1 0 0 3 0 0 0 0 0 0 12 0 1285.6197 Q4G0F5 Q4G0F5 302 313 VPS26B Vacuolar protein sorting-associated protein 26B yes yes 2;3 0.0041284 68.576 By MS/MS By MS/MS 2 2 44224000 19775000 24449000 5626 2045 6272 14151;14152;14153;14154 12926;12927;12928 12928 3999 3 SMSIDDTPR DQDDLKRRSMSIDDTP MSIDDTPRGSWACSIF R S M P R G 0 1 0 2 0 0 0 0 0 1 0 0 1 0 1 2 1 0 0 0 0 0 9 0 1020.4546 Q96N67;A0A1B0GUE9;A0A0C4DGY6;A0A1B0GVW2 Q96N67 180 188 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.0030048 93.442 By MS/MS By MS/MS 2 2 79213000 40230000 38984000 5627 2519 6273 14155;14156;14157;14158 12929;12930;12931 12931 5089;5090 3 SMSLDMGQPSQANTK QTSPRARKSMSLDMGQ QPSQANTKKLLGTRKS K S M T K K 1 0 1 1 0 2 0 1 0 0 1 1 2 0 1 3 1 0 0 0 0 0 15 0 1593.7127 J3QSG6;H0Y465;P21359 J3QSG6 316 330 NF1 Neurofibromin;Neurofibromin truncated yes no 2 8.6403E-06 112.03 By MS/MS By MS/MS 1 1 10066000 5890600 4175100 5628 1016 6274 14159;14160 12932;12933;12934 12932 1879;1880 3 SMSSIPPYPASSLASSSPPGSGR LDNLGRFRSMSSIPPY SSPPGSGRSTPRRIPH R S M G R S 2 1 0 0 0 0 0 2 0 1 1 0 1 0 5 9 0 0 1 0 0 0 23 0 2219.0528 Q13136;H0YDW2 Q13136 677 699 PPFIA1 Liprin-alpha-1 yes no 3 0.0037849 51.688 By MS/MS By MS/MS 2 2 12994000 7889800 5103800 5629 1899 6275 14161;14162;14163;14164 12935;12936 12935 3626;3627 2 SMSVDETDKSPCEAGR RPASCIVKSMSVDETD KSPCEAGRVRAGSLQL K S M G R V 1 1 0 2 1 0 2 1 0 0 0 1 1 0 1 3 1 0 0 1 0 0 16 1 1767.7404 A0A0X1KG75;A0A0D9SG04;Q53SF7;A0A0B4J1Z0 A0A0X1KG75 364 379 COBLL1 Cordon-bleu protein-like 1 yes no 2 0.0094106 62.077 By MS/MS By matching 1 1 11136000 6151200 4985200 5630 317 6276 14165;14166 12937 12937 579 1 SMVSPVPSPTGTISVPNSCPASPR HIPEPDLRSMVSPVPS NSCPASPRGAGSSSYR R S M P R G 1 1 1 0 1 0 0 1 0 1 0 0 1 0 6 6 2 0 0 3 0 0 24 0 2424.1777 P85037;U3KQ26 P85037 236 259 FOXK1 Forkhead box protein K1 yes no 2;3 0.00042232 57.945 By MS/MS By MS/MS 2 2 74632000 38196000 36436000 5631 1818 6277 14167;14168;14169;14170 12938;12939;12940 12939 3401;3402;3403;3404;3405;6760 3 SNDSGEEAEKEFIFV KDGHQGSKSNDSGEEA AEKEFIFV________ K S N F V - 1 0 1 1 0 0 4 1 0 1 0 1 0 2 0 2 0 0 0 1 0 0 15 1 1699.7577 Q5VZK9 Q5VZK9 1357 1371 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 2 5.2032E-23 147.07 By MS/MS By MS/MS 1 1 45549000 26678000 18871000 5632 2124 6278 14171;14172 12941;12942;12943 12943 4223 3 SNESVDIQDQEEK RSGKWKNKSNESVDIQ DIQDQEEKVVKQECIK K S N E K V 0 0 1 2 0 2 3 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 13 0 1519.6638 Q5UIP0 Q5UIP0 1576 1588 RIF1 Telomere-associated protein RIF1 yes yes 2 7.2783E-117 226.93 By MS/MS By MS/MS 1 1 42161000 20696000 21465000 5633 2112 6279 14173;14174 12944;12945 12945 4177 2 SNFSNSADDIK KSESNKRKSNFSNSAD SNSADDIKSKKKREQS K S N I K S 1 0 2 2 0 0 0 0 0 1 0 1 0 1 0 3 0 0 0 0 0 0 11 0 1196.5309 P45973 P45973 92 102 CBX5 Chromobox protein homolog 5 yes yes 2 0.0043154 78.705 By matching By MS/MS 1 1 5180000 2642300 2537700 5634 1702 6280 14175;14176 12946 12946 3133 1 SNLITHQKIHTREK CGKAFTDRSNLITHQK QKIHTREKPYECGDCG R S N E K P 0 1 1 0 0 1 1 0 2 2 1 2 0 0 0 1 2 0 0 0 0 0 14 2 1703.9431 P51814 P51814 718 731 ZNF41 Zinc finger protein 41 yes yes 2 0.0065347 57.492 By MS/MS 1 2522600 2522600 0 5635 1747 6281 14177 12947 12947 6728 1 SNMSPDKPVSVK TENAKVTRSNMSPDKP PDKPVSVKISFEDEPR R S N V K I 0 0 1 1 0 0 0 0 0 0 0 2 1 0 2 3 0 0 0 2 0 0 12 1 1287.6493 H7C3C4 H7C3C4 772 783 SLC4A7 Anion exchange protein yes yes 2 0.0026431 91.307 By MS/MS 1 4415000 4415000 0 5636 1178 6282 14178 12948 12948 2138 1 SNMSPHGLPAR GERPGPNRSNMSPHGL SPHGLPARSSGSPKFA R S N A R S 1 1 1 0 0 0 0 1 1 0 1 0 1 0 2 2 0 0 0 0 0 0 11 0 1165.5662 H0Y4T7;E7ESY4;Q13330 H0Y4T7 238 248 MTA1 Metastasis-associated protein MTA1 yes no 3 0.011287 60.064 By MS/MS By MS/MS 1 1 14350000 7532600 6817900 5637 735 6283 14179;14180 12949;12950 12950 1317 2 SNPKSPQKPIVR QNPTDVARSNPKSPQK SPQKPIVRVFLPNKQR R S N V R V 0 1 1 0 0 1 0 0 0 1 0 2 0 0 3 2 0 0 0 1 0 0 12 2 1349.7779 P15056;H7C5K3 P15056 147 158 BRAF Serine/threonine-protein kinase B-raf yes no 3 0.015953 59.265 By MS/MS By MS/MS 1 1 24827000 13871000 10956000 5638 1581 6284 14181;14182 12951;12952 12951 2904 2 SNPSIQATLNK SSGLQSSRSNPSIQAT SIQATLNKTVLSSSLN R S N N K T 1 0 2 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 11 0 1171.6197 Q6UUV7 Q6UUV7 329 339 CRTC3 CREB-regulated transcription coactivator 3 yes yes 2 0.0083585 71.888 By matching By MS/MS 1 1 15884000 9980700 5903000 5639 2169 6285 14183;14184 12953 12953 4336 1 SNQIPTEVR KEQLKIRKSNQIPTEV NQIPTEVRSKAEEVVS K S N V R S 0 1 1 0 0 1 1 0 0 1 0 0 0 0 1 1 1 0 0 1 0 0 9 0 1042.5407 Q9BWH2 Q9BWH2 151 159 FUNDC2 FUN14 domain-containing protein 2 yes yes 2 0.0081179 77.124 By MS/MS By matching 1 1 38840000 20228000 18612000 5640 2592 6286 14185;14186 12954 12954 5247 1 SNQNGKDSKPSSTPR TPAKNAQKSNQNGKDS SKPSSTPRSKGQESFK K S N P R S 0 1 2 1 0 1 0 1 0 0 0 2 0 0 2 4 1 0 0 0 0 0 15 2 1601.7758 P06748 P06748 207 221 NPM1 Nucleophosmin yes yes 2;3 0.0010152 81.703 By MS/MS By MS/MS 3 3 42217000 34988000 7228600 5641 1533 6287;6288 14187;14188;14189;14190;14191;14192 12955;12956;12957;12958 12955 2821;2822;6659 4 SNSAPLIHGLSDTSPVFQAEAPSAR GGGGGLRRSNSAPLIH QAEAPSARRNSTTFPS R S N A R R 4 1 1 1 0 1 1 1 1 1 2 0 0 1 3 5 1 0 0 1 0 0 25 0 2551.2667 Q96E09 Q96E09 35 59 FAM122A Protein FAM122A yes yes 3 9.2717E-05 67.239 By MS/MS By matching 1 1 148150000 86379000 61776000 5642 2476 6289 14193;14194 12959 12959 4991;4992;4993;6999 1 SNSAWQIYLQR QAVRARPRSNSAWQIY AWQIYLQRRAERGTPK R S N Q R R 1 1 1 0 0 2 0 0 0 1 1 0 0 0 0 2 0 1 1 0 0 0 11 0 1364.6837 Q8N4C8 Q8N4C8 699 709 MINK1 Misshapen-like kinase 1 yes yes 2 2.852E-06 145.81 By MS/MS By MS/MS 1 1 7735200 4646100 3089100 5643 2311 6290 14195;14196 12960;12961 12961 4645 2 SNSDESNFSEKLR GATNNLSRSNSDESNF SNFSEKLRASTVMYHP R S N L R A 0 1 2 1 0 0 2 0 0 0 1 1 0 1 0 4 0 0 0 0 0 0 13 1 1511.6852 A0A087WWW9;O95999 A0A087WWW9 125 137 BCL10 B-cell lymphoma/leukemia 10 yes no 2;3 1.7084E-07 127.07 By MS/MS By MS/MS 1 2 32666000 7702600 24963000 5644 84 6291 14197;14198;14199 12962;12963;12964 12963 158 3 SNSDVTISDIDAEDVLDQNAVNPNTGAALHR GLHPIRQRSNSDVTIS NTGAALHREYGSTSSI R S N H R E 4 1 4 5 0 1 1 1 1 2 2 0 0 0 1 3 2 0 0 3 0 0 31 0 3250.5338 Q9P2F8 Q9P2F8 160 190 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 3 0.001245 51.401 By MS/MS By MS/MS 1 1 13009000 5589800 7419600 5645 2790 6292 14200;14201 12965;12966 12965 5728;5729 2 SNSEDSSVGKGDWK ERKNPLHKSNSEDSSV SVGKGDWKKKNKYFWQ K S N W K K 0 0 1 2 0 0 1 2 0 0 0 2 0 0 0 4 0 1 0 1 0 0 14 1 1494.6587 O94885 O94885 135 148 SASH1 SAM and SH3 domain-containing protein 1 yes yes 2 0.0057899 68.919 By MS/MS By MS/MS 1 1 8347300 4624200 3723100 5646 1467 6293 14202;14203 12967;12968;12969 12969 2721;2722 3 SNSELEDEILCLEK ATCEKLNRSNSELEDE DEILCLEKELKEEKSK R S N E K E 0 0 1 1 1 0 4 0 0 1 3 1 0 0 0 2 0 0 0 0 0 0 14 0 1677.7767 G3V599;O15320;Q96PC5;G3V5K6;Q8IX94;Q86UF2;P0CG41;A4FU28;A4D2H0 G3V599 672 685 CTAGE5;MIA2;CTAGE4;CTAGE6;CTAGE8;CTAGE9;CTAGE15 cTAGE family member 5;Melanoma inhibitory activity protein 2;cTAGE family member 4;cTAGE family member 6;cTAGE family member 8;cTAGE family member 9;cTAGE family member 15 yes no 2 0.00092179 92.38 By matching By MS/MS 1 1 11957000 6333300 5623600 5647 980 6294 14204;14205 12970 12970 1784 1 SNSEVEDVGPTSHNR KKQGMKKRSNSEVEDV VGPTSHNRKKARWDTL R S N N R K 0 1 2 1 0 0 2 1 1 0 0 0 0 0 1 3 1 0 0 2 0 0 15 0 1626.7234 Q13206 Q13206 829 843 DDX10 Probable ATP-dependent RNA helicase DDX10 yes yes 2 5.6102E-21 145.79 By MS/MS By MS/MS 1 1 33881000 16012000 17868000 5648 1904 6295 14206;14207 12971;12972 12971 3641 2 SNSEVEDVGPTSHNRK KKQGMKKRSNSEVEDV GPTSHNRKKARWDTLE R S N R K K 0 1 2 1 0 0 2 1 1 0 0 1 0 0 1 3 1 0 0 2 0 0 16 1 1754.8184 Q13206 Q13206 829 844 DDX10 Probable ATP-dependent RNA helicase DDX10 yes yes 3 0.003541 57.41 By MS/MS By MS/MS 1 1 6689800 4538200 2151600 5649 1904 6296 14208;14209 12973;12974;12975 12974 3641 3 SNSGLGGEVSGVMSKPNVDPQPWFQDGPK PRQGGLPRSNSGLGGE PWFQDGPKSYLSSSAP R S N P K S 0 0 2 2 0 2 1 5 0 0 1 2 1 1 4 4 0 1 0 3 0 0 29 1 3013.424 C9JRJ5;Q9UGP4 C9JRJ5 314 342 LIMD1 LIM domain-containing protein 1 yes no 3 5.4211E-07 76.004 By matching By MS/MS 2 2 84310000 48615000 35695000 5650 605 6297;6298 14210;14211;14212;14213 12976;12977 12976 63 1103 2 SNSGRELTDEEILASVMIK VMGPQRPRSNSGRELT ILASVMIKNLDTGEEI R S N I K N 1 1 1 1 0 0 3 1 0 2 2 1 1 0 0 3 1 0 0 1 0 0 19 1 2091.0518 Q5JSH3;H7BY83 Q5JSH3 342 360 WDR44 WD repeat-containing protein 44 yes no 3 0.001121 72.21 By MS/MS By matching 2 2 14750000 10919000 3830500 5651 2073 6299;6300 14214;14215;14216;14217 12978;12979 12978 280 4075;4076 2 SNSGVRLDGYAR ________________ VRLDGYARLVQQTILC R S N A R L 1 2 1 1 0 0 0 2 0 0 1 0 0 0 0 2 0 0 1 1 0 0 12 1 1293.6426 P46019;A6NIT2;A6NMN0;P46020 P46019 5 16 PHKA2;PHKA1 Phosphorylase b kinase regulatory subunit alpha, liver isoform;Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform yes no 3 0.0061824 65.232 By MS/MS By MS/MS 1 1 15034000 8448300 6585200 5652 1705 6301 14218;14219 12980;12981 12981 3152 2 SNSHSDHIR LENRKRSRSNSHSDHI NSHSDHIRRGRGRPKS R S N I R R 0 1 1 1 0 0 0 0 2 1 0 0 0 0 0 3 0 0 0 0 0 0 9 0 1051.4795 H3BQL3;Q6PH81 H3BQL3 94 102 C16orf87 UPF0547 protein C16orf87 yes no 3 0.001935 89.08 By MS/MS By MS/MS 1 1 7685800 2183700 5502100 5653 1130 6302 14220;14221 12982;12983 12983 2064;2065 2 SNSIKRNPNAPVVR KVHNFGKRSNSIKRNP NPNAPVVRRGWLYKQD R S N V R R 1 2 3 0 0 0 0 0 0 1 0 1 0 0 2 2 0 0 0 2 0 0 14 2 1550.8641 B4DJX4;Q9HAU0;F5H1X3 B4DJX4 51 64 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes no 3 0.0023618 74.726 By MS/MS By MS/MS 1 1 16954000 10592000 6361600 5654 483 6303 14222;14223 12984;12985;12986 12984 915 3 SNSIQQMEQLNR PAPQVLQRSNSIQQME QQMEQLNRRYQSIRRT R S N N R R 0 1 2 0 0 3 1 0 0 1 1 0 1 0 0 2 0 0 0 0 0 0 12 0 1446.6885 Q9P2P5 Q9P2P5 850 861 HECW2 E3 ubiquitin-protein ligase HECW2 yes yes 2 0.00052697 107.93 By MS/MS By MS/MS 1 1 7452700 4736000 2716700 5655 2797 6304 14224;14225 12987;12988 12987 5738 2 SNSISQIPSLEEMQQLR LTRRRLKRSNSISQIP LEEMQQLRSCNRQLQI R S N L R S 0 1 1 0 0 3 2 0 0 2 2 0 1 0 1 4 0 0 0 0 0 0 17 0 1958.9731 A0A1B0GV57;Q9NYJ8 A0A1B0GV57 296 312 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes no 2;3 0.00012701 81.226 By MS/MS By MS/MS 2 2 17445000 10776000 6669200 5656 376 6305 14226;14227;14228;14229 12989;12990;12991;12992 12990 711;712 4 SNSLPHSAVSNAGSK SVPPPLPRSNSLPHSA AVSNAGSKSSVMDGAI R S N S K S 2 0 2 0 0 0 0 1 1 0 1 1 0 0 1 5 0 0 0 1 0 0 15 0 1454.7114 A0A088AWN2;Q8TBZ3 A0A088AWN2 463 477 WDR20 WD repeat-containing protein 20 yes no 2 3.2844E-06 117.27 By matching By MS/MS 1 1 45160000 22282000 22878000 5657 152 6306 14230;14231 12993 12993 273 1 SNSLSEQLAINTSPDAVK GEPALRTKSNSLSEQL NTSPDAVKAKLISRMA K S N V K A 2 0 2 1 0 1 1 0 0 1 2 1 0 0 1 4 1 0 0 1 0 0 18 0 1872.9429 A0A0A0MT60;Q5T1M5;X6RKW4 A0A0A0MT60 369 386 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 8.5181E-46 164.69 By MS/MS By MS/MS 1 1 32223000 21337000 10886000 5658 238 6307 14232;14233 12994;12995 12994 430;431;432 2 SNSLSEQLAINTSPDAVKAK GEPALRTKSNSLSEQL SPDAVKAKLISRMAKM K S N A K L 3 0 2 1 0 1 1 0 0 1 2 2 0 0 1 4 1 0 0 1 0 0 20 1 2072.075 A0A0A0MT60;Q5T1M5;X6RKW4 A0A0A0MT60 369 388 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 3 0.00075113 69.528 By MS/MS By MS/MS 1 1 12302000 7035200 5267200 5659 238 6308 14234;14235 12996;12997;12998 12996 430;431;432 3 SNSMLELAPK GPVDPSNRSNSMLELA SMLELAPKVASPGSTI R S N P K V 1 0 1 0 0 0 1 0 0 0 2 1 1 0 1 2 0 0 0 0 0 0 10 0 1088.5536 A6PVU7;Q9P2M7;A2A3M4 A6PVU7 153 162 CGN Cingulin yes no 2 0.001608 101.35 By MS/MS By MS/MS 1 1 3526400 1622800 1903600 5660 426 6309 14236;14237 12999;13000;13001 13000 804 3 SNSPLPVPPSK SRSRSQSRSNSPLPVP PLPVPPSKARSVSPPP R S N S K A 0 0 1 0 0 0 0 0 0 0 1 1 0 0 4 3 0 0 0 1 0 0 11 0 1121.6081 Q13247 Q13247 301 311 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 2 4.8038E-06 130.47 By MS/MS By MS/MS 3 2 27580000 18247000 9333500 5661 1907 6310 14238;14239;14240;14241;14242 13002;13003;13004;13005;13006;13007;13008;13009 13002 3649 8 SNSQSYIGRPIHLDK SFIGREKRSNSQSYIG GRPIHLDKILMSKVKV R S N D K I 0 1 1 1 0 1 0 1 1 2 1 1 0 0 1 3 0 0 1 0 0 0 15 1 1713.8798 Q15139;F8WBA3 Q15139 247 261 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 3 0.0019581 66.289 By MS/MS By MS/MS 1 1 21600000 12270000 9329500 5662 1978 6311 14243;14244 13010;13011 13010 3854 2 SNSRLEDQVIGVALQASK RYSQSVIRSNSRLEDQ GVALQASKKEESVVGS R S N S K K 2 1 1 1 0 2 1 1 0 1 2 1 0 0 0 3 0 0 0 2 0 0 18 1 1914.0171 Q2KHR3 Q2KHR3 613 630 QSER1 Glutamine and serine-rich protein 1 yes yes 3 0.00032257 75.054 By MS/MS By MS/MS 1 1 5128500 3340000 1788500 5663 2027 6312 14245;14246 13012;13013 13012 3961;3962 2 SNSSEALLVDR LFVARTRRSNSSEALL SEALLVDRAAGGGAGS R S N D R A 1 1 1 1 0 0 1 0 0 0 2 0 0 0 0 3 0 0 0 1 0 0 11 0 1189.5939 Q96HB5 Q96HB5 358 368 CCDC120 Coiled-coil domain-containing protein 120 yes yes 2 7.0509E-06 134.4 By MS/MS By MS/MS 2 2 11420000 6145600 5273900 5664 2499 6313 14247;14248;14249;14250 13014;13015;13016;13017;13018;13019 13016 5031;5032 6 SNSSSEAVLGQEELSAQAK DTWPRGSRSNSSSEAV EELSAQAKVLAPGASH R S N A K V 3 0 1 0 0 2 3 1 0 0 2 1 0 0 0 5 0 0 0 1 0 0 19 0 1933.9229 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 393 411 RAB11FIP5 Rab11 family-interacting protein 5 yes no 2 3.25E-33 153.17 By matching By MS/MS 1 1 26441000 15592000 10849000 5665 364 6314 14251;14252 13020 13020 675 1 SNSTEYLNPWFK RGKRFRPRSNSTEYLN EYLNPWFKRDYNVAKW R S N F K R 0 0 2 0 0 0 1 0 0 0 1 1 0 1 1 2 1 1 1 0 0 0 12 0 1484.6936 H7C3I4 H7C3I4 184 195 ADAM22 yes yes 2 1.7094E-08 141.34 By MS/MS By matching 1 1 4096800 2368200 1728600 5666 1182 6315 14253;14254 13021 13021 2144;7469 1 SNSTSSMSSGLPEQDR DTSKPFPRSNSTSSMS SGLPEQDRMAMTLPRN R S N D R M 0 1 1 1 0 1 1 1 0 0 1 0 1 0 1 6 1 0 0 0 0 0 16 0 1681.7213 P42684 P42684 781 796 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 5.316E-36 170.48 By MS/MS By MS/MS 1 1 26531000 14408000 12123000 5667 1699 6316 14255;14256 13022;13023 13023 3119;3120 2 SNSVEKPVSSILSR AGRKPWERSNSVEKPV PVSSILSRMKPAGSVN R S N S R M 0 1 1 0 0 0 1 0 0 1 1 1 0 0 1 5 0 0 0 2 0 0 14 1 1501.81 H0YJN0;Q9UI08 H0YJN0 146 159 EVL Ena/VASP-like protein yes no 2;3 0.0022068 67.655 By MS/MS By matching 2 1 19115000 15881000 3234000 5668 1082 6317 14257;14258;14259 13024;13025 13025 1999 2 SNSVGIQDAFNDGSDSTFQK PPLPGMSRSNSVGIQD GSDSTFQKRNSMTPNP R S N Q K R 1 0 2 3 0 2 0 2 0 1 0 1 0 2 0 4 1 0 0 1 0 0 20 0 2115.9345 O14497;H0Y488;A0A1B0GTU5;A0A087WUV6 O14497 1182 1201 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 0.00077423 73.21 By MS/MS By matching 1 1 10328000 5696700 4631500 5669 1339 6318 14260;14261 13026 13026 2420;2421 1 SNSVGIQDAFNDGSDSTFQKR PPLPGMSRSNSVGIQD SDSTFQKRNSMTPNPG R S N K R N 1 1 2 3 0 2 0 2 0 1 0 1 0 2 0 4 1 0 0 1 0 0 21 1 2272.0356 O14497;H0Y488;A0A1B0GTU5;A0A087WUV6 O14497 1182 1202 ARID1A AT-rich interactive domain-containing protein 1A yes no 3 1.1567E-06 84.529 By MS/MS By MS/MS 1 1 48170000 25771000 22399000 5670 1339 6319 14262;14263 13027;13028 13028 2420;2421 2 SNSVSLVPPGSSHTLPR SNHLSLSKSNSVSLVP GSSHTLPRRAQSLKAP K S N P R R 0 1 1 0 0 0 0 1 1 0 2 0 0 0 3 5 1 0 0 2 0 0 17 0 1733.906 Q6R327 Q6R327 1282 1298 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2;3 0.00033988 75.877 By MS/MS By MS/MS 2 2 25347000 12723000 12624000 5671 2165 6320 14264;14265;14266;14267 13029;13030;13031;13032;13033 13032 4319;4320 5 SNSWQGNLGGNK ICENGRPRSNSWQGNL QGNLGGNKKKIRGKRF R S N N K K 0 0 3 0 0 1 0 3 0 0 1 1 0 0 0 2 0 1 0 0 0 0 12 0 1260.5847 H7C3I4;H7C0Q9;Q9P0K1 H7C3I4 161 172 ADAM22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 2 0.00016147 113.07 By MS/MS By MS/MS 1 1 14318000 8179500 6138200 5672 1182 6321 14268;14269 13034;13035 13034 2145 2 SNSWVNTGGPK IGSKGLDRSNSWVNTG WVNTGGPKAAPWGSNP R S N P K A 0 0 2 0 0 0 0 2 0 0 0 1 0 0 1 2 1 1 0 1 0 0 11 0 1145.5465 A0A1B0GWE0;Q96N67;A0A0U1RRC1 Q96N67 927 937 DOCK7 Dedicator of cytokinesis protein 7 no no 2 0.00032552 110.15 By MS/MS By MS/MS 1 1 49879000 25195000 24684000 5673 2519;381 6322 14270;14271 13036;13037 13036 722;723 2 SNTEPQSPPIASPK DTSTWGLKSNTEPQSP SPPIASPKAITKPVRR K S N P K A 1 0 1 0 0 1 1 0 0 1 0 1 0 0 4 3 1 0 0 0 0 0 14 0 1451.7256 F8WF45;P82094 F8WF45 66 79 TMF1 TATA element modulatory factor yes no 2 3.271E-12 133.04 By MS/MS By MS/MS 2 2 25406000 13091000 12314000 5674 954 6323;6324 14272;14273;14274;14275 13038;13039;13040;13041;13042;13043 13038 1726;1727 6 SNTLPSDVGRK PHYSQTTRSNTLPSDV LPSDVGRKSVTLRKMK R S N R K S 0 1 1 1 0 0 0 1 0 0 1 1 0 0 1 2 1 0 0 1 0 0 11 1 1172.6149 F5H4N6;Q9Y3R0;H0YFK8;F5H4P8 F5H4N6 903 913 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.005811 103.46 By MS/MS 1 4162700 4162700 0 5675 885 6325 14276 13044 13044 6467 1 SNVSDAVAQSTR EKLRGWLKSNVSDAVA DAVAQSTRIIYGGSVT K S N T R I 2 1 1 1 0 1 0 0 0 0 0 0 0 0 0 3 1 0 0 2 0 0 12 0 1233.5949 P60174 P60174 232 243 TPI1 Triosephosphate isomerase yes yes 2 0.00027058 113.44 By MS/MS By MS/MS 1 1 11847000 5962100 5885000 5676 1781 6326 14277;14278 13045;13046;13047 13047 3 SNVSSPATPTASSSSSTTPTR VEGKRKRRSNVSSPAT SSSTTPTRKITESPRA R S N T R K 2 1 1 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 1 0 0 21 0 2021.9502 Q12888;A6NNK5;H7BZY0 Q12888 1631 1651 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2;3 0.00091692 70.027 By MS/MS By MS/MS 2 2 26099000 12074000 14026000 5677 1882 6327 14279;14280;14281;14282 13048;13049;13050 13049 6780;6781 3 SNVVRKDYDTLSK QASPMIERSNVVRKDY KDYDTLSKCSPKMPPA R S N S K C 0 1 1 2 0 0 0 0 0 0 1 2 0 0 0 2 1 0 1 2 0 0 13 2 1523.7944 Q9UHR4 Q9UHR4 267 279 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2;3 0.0004165 94.673 By MS/MS By MS/MS 2 2 52916000 36424000 16492000 5678 2816 6328 14283;14284;14285;14286 13051;13052;13053 13052 7086;7932 3 SNVYQPTEMAVVLNGGTIPTAPPSHTGR KRPSAPFRSNVYQPTE APPSHTGRHLW_____ R S N G R H 2 1 2 0 0 1 1 3 1 1 1 0 1 0 4 2 4 0 1 3 0 0 28 0 2893.4392 Q9NZH0 Q9NZH0 373 400 GPRC5B G-protein coupled receptor family C group 5 member B yes yes 3 0.00039616 57.738 By MS/MS 1 6088300 6088300 0 5679 2766 6329 14287 13054 13054 7919 1 SNYSELREDIQTK LREEGFRRSNYSELRE LREDIQTKGKEVENFE R S N T K G 0 1 1 1 0 1 2 0 0 1 1 1 0 0 0 2 1 0 1 0 0 0 13 1 1581.7635 Q9UN81 Q9UN81 50 62 L1RE1 LINE-1 retrotransposable element ORF1 protein yes yes 2 0.0033218 84.31 By matching By MS/MS 1 1 5341700 2647200 2694500 5680 2861 6330 14288;14289 13055 13055 5895 1 SPAFALK VLPITVPKSPAFALKN KSPAFALKNRIRMPTK K S P L K N 2 0 0 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 7 0 732.41703 Q9ULW0 Q9ULW0 486 492 TPX2 Targeting protein for Xklp2 yes yes 2 0.026663 76.478 By MS/MS By matching 1 1 5414700 3359400 2055300 5681 2854 6331 14290;14291 13056 13056 5879 1 SPAGPAATPAQAQAASTPR LIFVDPNRSPAGPAAT AQAASTPRKARASEST R S P P R K 7 1 0 0 0 2 0 1 0 0 0 0 0 0 4 2 2 0 0 0 0 0 19 0 1748.8806 Q13428;J3KQ96;E7ETY2 Q13428 967 985 TCOF1 Treacle protein yes no 2 0.0055899 61.096 By MS/MS By matching 1 1 8767600 4596700 4170900 5682 1915 6332 14292;14293 13057 13057 3686 1 SPAGSQQQFGYSPGQQQTHPQGSPR GYPGSYSRSPAGSQQQ THPQGSPRTSTPFGSG R S P P R T 1 1 0 0 0 7 0 4 1 0 0 0 0 1 4 4 1 0 1 0 0 0 25 0 2654.2222 Q8TAP9 Q8TAP9 93 117 MPLKIP M-phase-specific PLK1-interacting protein yes yes 3 0.0037377 49.662 By MS/MS By MS/MS 1 1 12859000 6947700 5911700 5683 2369 6333 14294;14295 13058;13059 13059 4747 2 SPAKTIAPQNAPR IHHIPSRRSPAKTIAP IAPQNAPRDESRGRSS R S P P R D 3 1 1 0 0 1 0 0 0 1 0 1 0 0 3 1 1 0 0 0 0 0 13 1 1349.7415 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00 Q9NYF8 300 312 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 0.0046779 78.529 By MS/MS By MS/MS 2 2 19223000 7664600 11558000 5684 2759 6334 14296;14297;14298;14299 13060;13061;13062 13060 5652 3 SPALKSPLQSVVVR SELSPRERSPALKSPL PLQSVVVRRRSPRPSP R S P V R R 1 1 0 0 0 1 0 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 14 1 1479.8773 Q9Y2W1 Q9Y2W1 248 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0010663 99.927 By matching By MS/MS 1 1 37878000 20076000 17802000 5685 2897 6335 14300;14301 13063 13063 6032;6033 1 SPAVATSTAAPPPPSSPLPSK MEVFLQEKSPAVATST PSSPLPSKSTSAPQMS K S P S K S 4 0 0 0 0 0 0 0 0 0 1 1 0 0 7 5 2 0 0 1 0 0 21 0 1959.0313 F8W726;Q14157 F8W726 450 470 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 7.6163E-81 183.39 By MS/MS By MS/MS 2 2 606000000 305580000 300430000 5686 937 6336 14302;14303;14304;14305 13064;13065;13066;13067;13068;13069;13070;13071;13072 13065 1688;1689 9 SPDEATAADQESEDDLSASR ASSPPDNKSPDEATAA EDDLSASRTSLERQAP K S P S R T 4 1 0 4 0 1 3 0 0 0 1 0 0 0 1 4 1 0 0 0 0 0 20 0 2092.8669 C9JME2;Q9Y4F1;M0QXT1 C9JME2 909 928 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 2 4.0194E-05 80.459 By MS/MS By matching 1 1 8310200 4069300 4240800 5687 600 6337 14306;14307 13073 13073 1091 1 SPDEATAADQESEDDLSASRTSLER ASSPPDNKSPDEATAA ASRTSLERQAPHRGNT K S P E R Q 4 2 0 4 0 1 4 0 0 0 2 0 0 0 1 5 2 0 0 0 0 0 25 1 2679.1744 C9JME2;Q9Y4F1;M0QXT1 C9JME2 909 933 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 3 0.021639 40.622 By matching By MS/MS 1 1 9989700 3707000 6282700 5688 600 6338 14308;14309 13074 13074 1091 1 SPDKPGGSPSASR REAREAARSPDKPGGS GGSPSASRRKGRASEH R S P S R R 1 1 0 1 0 0 0 2 0 0 0 1 0 0 3 4 0 0 0 0 0 0 13 1 1241.6 Q9Y3T9 Q9Y3T9 49 61 NOC2L Nucleolar complex protein 2 homolog yes yes 2 0.00025315 112.12 By MS/MS By MS/MS 1 1 33345000 19815000 13530000 5689 2912 6339 14310;14311 13075;13076 13076 6056;6057;6058 2 SPEAVGPELEAEEK PPPGELARSPEAVGPE PELEAEEKLSVRVAES R S P E K L 2 0 0 0 0 0 5 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 14 0 1483.7042 Q96N64 Q96N64 81 94 PWWP2A PWWP domain-containing protein 2A yes yes 2 0.0035367 73.386 By MS/MS 1 3279900 3279900 0 5690 2518 6340 14312 13077 13077 5084 1 SPEKIEEVLSPEGSPSKSPSK ENIEITIKSPEKIEEV SPSKSPSKKKKKFRTP K S P S K K 0 0 0 0 0 0 4 1 0 1 1 3 0 0 4 6 0 0 0 1 0 0 21 2 2211.1271 Q9UEY8 Q9UEY8 664 684 ADD3 Gamma-adducin yes yes 3 0.0046178 58.024 By matching By MS/MS 1 1 6289400 3617100 2672300 5691 2808 6341 14313;14314 13078 13078 5754;5755 1 SPFEDSRGYMMMFPR ASKKRHSRSPFEDSRG GYMMMFPRVSPPPAPS R S P P R V 0 2 0 1 0 0 1 1 0 0 0 0 3 2 2 2 0 0 1 0 0 0 15 1 1849.795 O14654 O14654 735 749 IRS4 Insulin receptor substrate 4 yes yes 3 0.015629 48.704 By MS/MS By MS/MS 1 1 2948800 1449400 1499400 5692 1343 6342 14315;14316 13079;13080 13079 7504 1 SPFLKPDER FSRDRESRSPFLKPDE PFLKPDERAPTEMAKA R S P E R A 0 1 0 1 0 0 1 0 0 0 1 1 0 1 2 1 0 0 0 0 0 0 9 1 1087.5662 Q9H7N4 Q9H7N4 874 882 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.0047495 103.31 By MS/MS By MS/MS 1 1 26807000 14539000 12268000 5693 2675 6343 14317;14318 13081;13082 13081 5462 2 SPGAPGPLTLK AQNQNQVRSPGAPGPL APGPLTLKEVEELEQL R S P L K E 1 0 0 0 0 0 0 2 0 0 2 1 0 0 3 1 1 0 0 0 0 0 11 0 1036.5917 H0Y2Y8;Q15942;C9JJK5 H0Y2Y8 312 322 ZYX Zyxin yes no 2 0.0039454 80.871 By MS/MS By matching 1 1 60049000 29848000 30201000 5694 1007 6344 14319;14320 13083 13083 1855 1 SPGASNFSTLPK PRGPSTPKSPGASNFS SNFSTLPKISPSSLSN K S P P K I 1 0 1 0 0 0 0 1 0 0 1 1 0 1 2 3 1 0 0 0 0 0 12 0 1204.6088 Q9Y4E8 Q9Y4E8 229 240 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 4.8623E-07 125.84 By MS/MS By MS/MS 1 1 12326000 5788900 6537500 5695 2919 6345 14321;14322 13084;13085 13084 6071;6072 2 SPGCRPLPSAGSPTPTTHEIVTVGDPLLSSGLR PSYSPTQRSPGCRPLP PLLSSGLRSIGSRRHS R S P L R S 1 2 0 1 1 0 1 4 1 1 4 0 0 0 6 5 4 0 0 2 0 0 33 1 3355.7194 Q03164 Q03164 2156 2188 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 0.0035608 47.66 By MS/MS By MS/MS 1 2 24278000 14282000 9996300 5696 1846 6346 14323;14324;14325 13086;13087 13086 3470;3471 2 SPGHMVILDQTK EKKRISSKSPGHMVIL MVILDQTKGDHCRPSR K S P T K G 0 0 0 1 0 1 0 1 1 1 1 1 1 0 1 1 1 0 0 1 0 0 12 0 1324.6809 Q9NWH9;H7C3F4 Q9NWH9 553 564 SLTM SAFB-like transcription modulator yes no 2;3 2.8349E-07 127.3 By MS/MS By MS/MS 2 2 46666000 20780000 25886000 5697 2744 6347 14326;14327;14328;14329 13088;13089;13090;13091 13088 5620 4 SPGLLDTTPIR AADSRDCRSPGLLDTT LLDTTPIRGSCTTQRK R S P I R G 0 1 0 1 0 0 0 1 0 1 2 0 0 0 2 1 2 0 0 0 0 0 11 0 1168.6452 Q8IY92 Q8IY92 1469 1479 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2 0.0047613 76.326 By MS/MS 1 1712500 1712500 0 5698 2287 6348 14330 13092 13092 4587 1 SPGMLEPLGSSR PTPLDRCRSPGMLEPL LEPLGSSRTPMSVLQQ R S P S R T 0 1 0 0 0 0 1 2 0 0 2 0 1 0 2 3 0 0 0 0 0 0 12 0 1229.6074 Q9UQ35 Q9UQ35 2132 2143 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0033957 82.202 By MS/MS By matching 1 1 6206200 3296200 2910000 5699 2877 6349 14331;14332 13093 13093 5945 1 SPGPLPGAR RAAAGSPRSPGPLPGA PGPLPGARGLHLPDAG R S P A R G 1 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 0 0 0 0 0 0 9 0 850.4661 Q96A47 Q96A47 157 165 ISL2 Insulin gene enhancer protein ISL-2 yes yes 2 0.027143 61.593 By MS/MS By matching 1 1 9845100 5371500 4473600 5700 2453 6350 14333;14334 13094 13094 4943 1 SPGSISYLPSFFTK AEQRNDARSPGSISYL YLPSFFTKLENTSPMV R S P T K L 0 0 0 0 0 0 0 1 0 1 1 1 0 2 2 4 1 0 1 0 0 0 14 0 1529.7766 A0A088AWL3;O75376;E7EVK1;J3KS29;J3QKP0 A0A088AWL3 2088 2101 NCOR1 Nuclear receptor corepressor 1 yes no 2 1.2379E-174 244.71 By MS/MS By MS/MS 1 1 31995000 21265000 10730000 5701 151 6351 14335;14336 13095;13096 13095 267;268 2 SPGSNSKVPEIEVTVEGPNNNNPQTSAVR LQSPKRPRSPGSNSKV NPQTSAVRTPTQTNGS R S P V R T 1 1 5 0 0 1 3 2 0 1 0 1 0 0 4 4 2 0 0 4 0 0 29 1 3020.4799 P78347 P78347 674 702 GTF2I General transcription factor II-I yes yes 3 2.7356E-14 93.908 By MS/MS By MS/MS 2 2 273680000 144070000 129600000 5702 1815 6352;6353 14337;14338;14339;14340 13097;13098;13099;13100 13098 3388;3389;6751;6752 4 SPGSPVGEGTGSPPK EKYKAKSRSPGSPVGE EGTGSPPKWQIGEQEF R S P P K W 0 0 0 0 0 0 1 4 0 0 0 1 0 0 4 3 1 0 0 1 0 0 15 0 1352.6572 P35611;E7EV99;E7ENY0;H0Y9H2;A0A0A0MSR2 P35611 355 369 ADD1 Alpha-adducin yes no 2 0.00023602 106.14 By MS/MS By MS/MS 1 1 58494000 25512000 32983000 5703 1673 6354 14341;14342 13101;13102 13102 3085 2 SPGSPVGEGTGSPPKWQIGEQEFEALMR EKYKAKSRSPGSPVGE QEFEALMRMLDNLGYR R S P M R M 1 1 0 0 0 2 4 5 0 1 1 1 1 1 4 3 1 1 0 1 0 0 28 1 2970.4182 P35611;E7EV99;E7ENY0;H0Y9H2;A0A0A0MSR2 P35611 355 382 ADD1 Alpha-adducin yes no 3 5.0476E-08 79.82 By MS/MS By matching 1 1 38010000 33847000 4162500 5704 1673 6355 14343;14344 13103 13103 3085 1 SPGTPRPPGASK KNLGPSRRSPGTPRPP PRPPGASKGGRTPPQQ R S P S K G 1 1 0 0 0 0 0 2 0 0 0 1 0 0 4 2 1 0 0 0 0 0 12 1 1150.6095 Q9Y3X0;M0QYB4 Q9Y3X0 80 91 CCDC9 Coiled-coil domain-containing protein 9 yes no 2 0.020383 63.602 By matching By MS/MS 1 1 7553000 2434700 5118300 5705 2913 6356 14345;14346 13104 13104 6060 1 SPGVAAAVAEDGGLKK MPVKKKRKSPGVAAAV AEDGGLKKCKISSYCR K S P K K C 4 0 0 1 0 0 1 3 0 0 1 2 0 0 1 1 0 0 0 2 0 0 16 1 1468.7886 E9PQV9;Q9BTE7;E9PLH8;E9PM78;H0YD80;E9PLS2;E9PM04 E9PQV9 9 24 DCUN1D5 DCN1-like protein;DCN1-like protein 5 yes no 2 0.00038919 93.738 By MS/MS By MS/MS 1 1 30528000 17184000 13343000 5706 839 6357 14347;14348 13105;13106 13105 1518 2 SPHKDLGHR ENLAKSRKSPHKDLGH PHKDLGHRKEENRRPL K S P H R K 0 1 0 1 0 0 0 1 2 0 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1045.5417 C9JAT7;O94888 C9JAT7 188 196 UBXN7 UBX domain-containing protein 7 yes no 3 0.013877 60.49 By matching By MS/MS 1 1 3245600 985370 2260200 5707 580 6358 14349;14350 13107 13107 1061 1 SPHQLLSPSSFSPSATPSQK TKRSVSTRSPHQLLSP PSATPSQKYNSRSNRG R S P Q K Y 1 0 0 0 0 2 0 0 1 0 2 1 0 1 4 7 1 0 0 0 0 0 20 0 2082.0382 E9PIQ6;Q14181 E9PIQ6 101 120 POLA2 DNA polymerase alpha subunit B yes no 3 2.5236E-09 100.92 By MS/MS By MS/MS 2 2 20174000 10293000 9881200 5708 804 6359 14351;14352;14353;14354 13108;13109;13110;13111;13112 13111 1439;1440 5 SPIIHSPK RSRSPKSRSPIIHSPK SPIIHSPKRRDRRSPK R S P P K R 0 0 0 0 0 0 0 0 1 2 0 1 0 0 2 2 0 0 0 0 0 0 8 0 877.50215 E9PKN0;E9PQ01;O94913 E9PKN0 489 496 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 2 0.021382 86.014 By MS/MS By MS/MS 1 1 3251500 3251500 0 5709 816 6360 14355;14356 13113;13114 13114 1460 2 SPIKASDLTK GRWNNNKKSPIKASDL IKASDLTKFGDCGGSD K S P T K F 1 0 0 1 0 0 0 0 0 1 1 2 0 0 1 2 1 0 0 0 0 0 10 1 1058.5972 J3KP30;Q5QJE6 J3KP30 381 390 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 0.0068599 77.124 By MS/MS By matching 1 1 7105400 3871000 3234400 5710 1229 6361 14357;14358 13115 13115 2227 1 SPISPLSDASK NKNEKMLRSPISPLSD SPLSDASKHKYTSEDL R S P S K H 1 0 0 1 0 0 0 0 0 1 1 1 0 0 2 4 0 0 0 0 0 0 11 0 1100.5714 P51826 P51826 878 888 AFF3 AF4/FMR2 family member 3 yes yes 2 0.00012798 114.71 By MS/MS By MS/MS 1 1 3804000 1873700 1930300 5711 1748 6362 14359;14360 13116;13117 13116 3305 2 SPISVPGGSALISNLGK TKTITLVKSPISVPGG ALISNLGKVMSVVQTK K S P G K V 1 0 1 0 0 0 0 3 0 2 2 1 0 0 2 4 0 0 0 1 0 0 17 0 1595.8883 P51610;A6NEM2 P51610 666 682 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 1.9738E-16 135.72 By MS/MS By MS/MS 1 1 8663500 5569700 3093800 5712 1745 6363 14361;14362 13118;13119 13118 3301 2 SPLAMSHASGVKTSPDPR SGEKKNKKSPLAMSHA VKTSPDPRQGEEETRV K S P P R Q 2 1 0 1 0 0 0 1 1 0 1 1 1 0 3 4 1 0 0 1 0 0 18 1 1836.9152 Q1ED39 Q1ED39 119 136 KNOP1 Lysine-rich nucleolar protein 1 yes yes 3 6.4243E-06 88.768 By MS/MS By MS/MS 1 1 20989000 10712000 10277000 5713 2024 6364 14363;14364 13120;13121;13122 13122 3957;6849 3 SPLELGEKLSPLPGGPGAGDPR SARSFSPKSPLELGEK GPGAGDPRIWPGRSTP K S P P R I 1 1 0 1 0 0 2 5 0 0 4 1 0 0 5 2 0 0 0 0 0 0 22 1 2143.1273 Q15742 Q15742 162 183 NAB2 NGFI-A-binding protein 2 yes yes 3 0.0047922 51.31 By MS/MS By MS/MS 1 1 5333700 2665700 2668000 5714 2006 6365 14365;14366 13123;13124 13124 3914 2 SPLGEAPPGTPPCR QPCQLCGRSPLGEAPP PPGTPPCRLCCPATAP R S P C R L 1 1 0 0 1 0 1 2 0 0 1 0 0 0 5 1 1 0 0 0 0 0 14 0 1434.6925 M0QXZ5;Q96B54 M0QXZ5 132 145 ZNF428 Zinc finger protein 428 yes no 2 2.19E-20 162.26 By MS/MS By MS/MS 1 2 10499000 6082300 4416800 5715 1299 6366 14367;14368;14369 13125;13126 13125 6579 2 SPLLAGGSPPQPVVPAHK SVGVMEMRSPLLAGGS QPVVPAHKDKSGAPPV R S P H K D 2 0 0 0 0 1 0 2 1 0 2 1 0 0 5 2 0 0 0 2 0 0 18 0 1750.973 Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5 66 83 NUP35 Nucleoporin NUP53 yes no 2 1.1122E-05 86.488 By MS/MS By matching 1 1 4577600 2169300 2408300 5716 2354 6367 14370;14371 13127 13127 4725 1 SPLRTSLASLR YGMATVIRSPLRTSLA RTSLASLRSEQSNGSV R S P L R S 1 2 0 0 0 0 0 0 0 0 3 0 0 0 1 3 1 0 0 0 0 0 11 1 1199.6986 Q9HDC5 Q9HDC5 157 167 JPH1 Junctophilin-1 yes yes 2 0.00038102 118.61 By MS/MS By matching 1 1 11729000 6174100 5554500 5717 2700 6368 14372;14373 13128 13128 5510;7056 1 SPLSALAR PKKGVLGKSPLSALAR SPLSALARKKARLSLV K S P A R K 2 1 0 0 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 8 0 813.47085 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 1290 1297 MYBBP1A Myb-binding protein 1A yes no 2 0.023453 68.846 By MS/MS 1 2497900 2497900 0 5718 2570 6369 14374 13129 13129 5187 1 SPLSGIPVR ISVHKTPRSPLSGIPV PLSGIPVRTAPAAAVS R S P V R T 0 1 0 0 0 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 0 0 9 0 924.53927 Q5M775;J3KSG2 Q5M775 847 855 SPECC1 Cytospin-B yes no 2 0.016819 66.92 By MS/MS By matching 1 1 4870800 2727500 2143300 5719 2081 6370 14375;14376 13130 13130 4100 1 SPLTGYVR LRDSNAPKSPLTGYVR SPLTGYVRFMNERREQ K S P V R F 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 1 1 0 0 8 0 891.48142 H0YNS8;H0YKM5;Q9NP66 H0YNS8 105 112 HMG20A High mobility group protein 20A yes no 2 0.025401 66.962 By matching By MS/MS 1 1 9744200 5592000 4152200 5720 1088 6371 14377;14378 13131 13131 2004 1 SPPASPESWK SVSPSSWKSPPASPES PASPESWKSGPPELRK K S P W K S 1 0 0 0 0 0 1 0 0 0 0 1 0 0 3 3 0 1 0 0 0 0 10 0 1084.5189 Q96JM3 Q96JM3 382 391 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0016067 101.39 By MS/MS By MS/MS 1 2 10797000 4771400 6025600 5721 2509 6372 14379;14380;14381 13132;13133;13134;13135;13136 13133 5066;5067;5068 5 SPPLLESPDATR SDSQQAVKSPPLLESP LESPDATRESMVKLSS K S P T R E 1 1 0 1 0 0 1 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 12 0 1281.6565 Q15036 Q15036 415 426 SNX17 Sorting nexin-17 yes yes 2 0.0076426 70.68 By matching By MS/MS 1 1 7289300 4069400 3219900 5722 1970 6373 14382;14383 13137 13137 3840 1 SPPLPAVIR VRRPQRPRSPPLPAVI PPLPAVIRNAPSRPPS R S P I R N 1 1 0 0 0 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 9 0 948.57565 Q9Y6X9 Q9Y6X9 615 623 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 0.0047541 86.882 By MS/MS By MS/MS 1 1 51266000 24908000 26358000 5723 2955 6374 14384;14385 13138;13139 13139 6141 2 SPPLSPVGTTPVK KSPSGPVKSPPLSPVG PVGTTPVKLKRAAPKE K S P V K L 0 0 0 0 0 0 0 1 0 0 1 1 0 0 4 2 2 0 0 2 0 0 13 0 1278.7184 C9J4K0;Q9BVC5 C9J4K0 147 159 C2orf49 Ashwin yes no 2 6.6469E-12 147.7 By MS/MS By MS/MS 1 1 19560000 10605000 8955000 5724 562 6375 14386;14387 13140;13141;13142;13143;13144;13145;13146;13147;13148 13142 1034;1035 9 SPPPGMGLNQNR RGGLHDFRSPPPGMGL GMGLNQNRGPMGPGPG R S P N R G 0 1 2 0 0 1 0 2 0 0 1 0 1 0 3 1 0 0 0 0 0 0 12 0 1266.6139 P23246 P23246 33 44 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.0023139 89.356 By MS/MS By MS/MS 1 1 23765000 11747000 12018000 5725 1620 6376 14388;14389 13149;13150 13150 2998 2 SPPRASYVAPLTAQPATYR RDRSPLRRSPPRASYV TAQPATYRAQPSVSLG R S P Y R A 4 2 0 0 0 1 0 0 0 0 1 0 0 0 4 2 2 0 2 1 0 0 19 1 2045.0694 Q96PK6 Q96PK6 220 238 RBM14 RNA-binding protein 14 yes yes 3 0.0020955 63.462 By MS/MS By MS/MS 1 1 26675000 13649000 13026000 5726 2524 6377 14390;14391 13151;13152 13152 5099 2 SPPREGSQGELTPANSQSR ARVDSHSKSPPREGSQ TPANSQSRMSTNM___ K S P S R M 1 2 1 0 0 2 2 2 0 0 1 0 0 0 3 4 1 0 0 0 0 0 19 1 1996.9562 J3QQX0;C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098 J3QQX0 56 74 GPS1 COP9 signalosome complex subunit 1 yes no 3 0.0016361 65.425 By MS/MS By MS/MS 3 2 28667000 16976000 11692000 5727 157 6378 14392;14393;14394;14395;14396 13153;13154;13155;13156 13154 278;6260 4 SPPSPVER LELQSHAKSPPSPVER SPPSPVEREMVVQVER K S P E R E 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 2 0 0 0 1 0 0 8 0 867.44503 Q02952 Q02952 1328 1335 AKAP12 A-kinase anchor protein 12 yes yes 2 0.0059458 105.2 By MS/MS By MS/MS 1 1 30064000 16948000 13116000 5728 1843 6379 14397;14398 13157;13158;13159;13160;13161;13162;13163 13158 3461 7 SPPSSSEIFTPAHEENVR GKRTSSPRSPPSSSEI PAHEENVRFIYEAWQG R S P V R F 1 1 1 0 0 0 3 0 1 1 0 0 0 1 3 4 1 0 0 1 0 0 18 0 1982.9334 I3L2L5;I3L317;I3L4Q0;C9JLW8;I3L3A7 I3L2L5 16 33 FAM195B Protein FAM195B yes no 3 0.029315 42.123 By MS/MS By matching 1 1 7394200 3519000 3875200 5729 599 6380 14399;14400 13164 13164 1089 1 SPQFINLK NLVANTARSPQFINLK SPQFINLKRDPRQAAG R S P L K R 0 0 1 0 0 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 8 0 945.52837 Q92576 Q92576 1642 1649 PHF3 PHD finger protein 3 yes yes 2 0.010928 86.882 By MS/MS 1 1338900 0 1338900 5730 2425 6381 14401 13165 13165 4876 1 SPQLSDFGLER CISEKSPRSPQLSDFG LSDFGLERYIVSQVLP R S P E R Y 0 1 0 1 0 1 1 1 0 0 2 0 0 1 1 2 0 0 0 0 0 0 11 0 1247.6146 Q8IX90 Q8IX90 155 165 SKA3 Spindle and kinetochore-associated protein 3 yes yes 2 0.0058462 74.987 By MS/MS By matching 1 1 7778600 4120100 3658500 5731 2277 6382 14402;14403 13166 13166 4573 1 SPQMVSAIVR ASRHAIMRSPQMVSAI QMVSAIVRTMQNTNDV R S P V R T 1 1 0 0 0 1 0 0 0 1 0 0 1 0 1 2 0 0 0 2 0 0 10 0 1086.5856 B4DGU4;P35222 B4DGU4 184 193 CTNNB1 Catenin beta-1 yes no 2 0.0026921 86.114 By MS/MS By matching 1 1 3781100 2455700 1325300 5732 481 6383 14404;14405 13167 13167 911 1 SPQPPSR EKGKPKPRSPQPPSRQ RSPQPPSRQAEPPKKE R S P S R Q 0 1 0 0 0 1 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 7 0 767.3926 E7ERS3;Q86VM9 E7ERS3 511 517 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.0099941 100.02 By MS/MS By MS/MS 2 1 25563000 11391000 14172000 5733 727 6384 14406;14407;14408 13168;13169;13170;13171;13172 13168 1303 5 SPQPVCSPAGSEGTPK NAASFPLRSPQPVCSP AGSEGTPKGSRPPLIL R S P P K G 1 0 0 0 1 1 1 2 0 0 0 1 0 0 4 3 1 0 0 1 0 0 16 0 1597.7406 Q6KC79 Q6KC79 274 289 NIPBL Nipped-B-like protein yes yes 2 0.00035654 84.605 By matching By MS/MS 1 1 8141400 4405900 3735500 5734 2147 6385 14409;14410 13173 13173 4270;4271 1 SPQQSAALPR ALEPKESRSPQQSAAL QQSAALPRRYMLRERE R S P P R R 2 1 0 0 0 2 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 10 0 1053.5567 E5RJN3;A0A0A6YYG7;Q6IBW4 E5RJN3 250 259 NCAPH2 Condensin-2 complex subunit H2 yes no 2 0.018722 64.64 By MS/MS By MS/MS 1 1 19781000 11674000 8106900 5735 254 6386 14411;14412 13174;13175 13175 461 2 SPQQTVPYVVPLSPK TERQSTKRSPQQTVPY YVVPLSPKLPKTKEYA R S P P K L 0 0 0 0 0 2 0 0 0 0 1 1 0 0 4 2 1 0 1 3 0 0 15 0 1638.8981 H0Y6S1;Q9UQR0 H0Y6S1 15 29 SCML2 Sex comb on midleg-like protein 2 yes no 2;3 2.2804E-06 115.68 By MS/MS By MS/MS 2 2 23684000 13366000 10319000 5736 1033 6387 14413;14414;14415;14416 13176;13177;13178 13177 1923;1924;7438 3 SPQQTVPYVVPLSPKLPK TERQSTKRSPQQTVPY PLSPKLPKTKEYASEG R S P P K T 0 0 0 0 0 2 0 0 0 0 2 2 0 0 5 2 1 0 1 3 0 0 18 1 1977.1299 H0Y6S1;Q9UQR0 H0Y6S1 15 32 SCML2 Sex comb on midleg-like protein 2 yes no 3 0.00013764 77.657 By MS/MS By MS/MS 1 1 8806600 4134800 4671800 5737 1033 6388 14417;14418 13179;13180 13179 1923;1924;7438 2 SPQTLAPVGEDAMKTPSPAAEDAREPEAK GLTLKEERSPQTLAPV DAREPEAKGNS_____ R S P A K G 6 1 0 2 0 1 4 1 0 0 1 2 1 0 5 2 2 0 0 1 0 0 29 2 2992.4448 Q92797 Q92797 1243 1271 SYMPK Symplekin yes yes 4 1.3531E-05 67.01 By MS/MS By matching 1 1 11534000 7198600 4335200 5738 2439 6389 14419;14420 13181 13181 4913;6986 1 SPRGSPDGSLQTGKPSAPK PADALKLRSPRGSPDG TGKPSAPKKLKLDVGE R S P P K K 1 1 0 1 0 1 0 3 0 0 1 2 0 0 4 4 1 0 0 0 0 0 19 2 1865.9595 E7EV54;C9JFV4;Q8IZL8 E7EV54 330 348 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 3 3.7191E-07 107.25 By MS/MS By MS/MS 1 1 8356800 4643600 3713200 5739 590 6390 14421;14422 13182;13183 13183 1073;1074;1075 2 SPRITPPAAKPGSPQAK PVPSMVQKSPRITPPA KPGSPQAKSLQPAVAE K S P A K S 3 1 0 0 0 1 0 1 0 1 0 2 0 0 5 2 1 0 0 0 0 0 17 2 1701.9526 A0A0A0MSW3;P35658 A0A0A0MSW3 95 111 NUP214 Nuclear pore complex protein Nup214 yes no 3 0.0082994 58.361 By MS/MS By matching 1 1 12149000 7174400 4974400 5740 226 6391 14423;14424 13184 13184 409;412 1 SPRPASPASNVVVLPSGSTVYVK SGSIATVKSPRPASPA SGSTVYVKSVSCSDED K S P V K S 2 1 1 0 0 0 0 1 0 0 1 1 0 0 4 5 1 0 1 5 0 0 23 1 2311.2536 E9PMC9;Q7Z589 E9PMC9 169 191 C11orf30;EMSY Protein EMSY yes no 3 0.00062359 61.436 By MS/MS By MS/MS 1 1 9790200 5444500 4345700 5741 827 6392 14425;14426 13185;13186 13185 1475 2 SPRSPQLSDFGLER ASSCISEKSPRSPQLS LSDFGLERYIVSQVLP K S P E R Y 0 2 0 1 0 1 1 1 0 0 2 0 0 1 2 3 0 0 0 0 0 0 14 1 1587.8005 Q8IX90 Q8IX90 152 165 SKA3 Spindle and kinetochore-associated protein 3 yes yes 3 0.0011947 78.848 By matching By MS/MS 1 1 12137000 6568000 5568900 5742 2277 6393 14427;14428 13187;13188 13188 4573 2 SPSAGILR LARVADPRSPSAGILR SPSAGILRTPIQVESS R S P L R T 1 1 0 0 0 0 0 1 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 0 799.4552 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 29 36 CDCA3 Cell division cycle-associated protein 3 yes no 2 0.021269 90.601 By MS/MS By MS/MS 1 1 0 0 0 5743 2555 6394 14429;14430 13189;13190 13189 5165 2 SPSDLHISPLAK PGSSLEARSPSDLHIS LHISPLAKKLPPPPGS R S P A K K 1 0 0 1 0 0 0 0 1 1 2 1 0 0 2 3 0 0 0 0 0 0 12 0 1263.6823 B9EGQ5;M0QXA7;O95785 B9EGQ5 308 319 WIZ Protein Wiz yes no 2 7.3584E-20 170 By MS/MS By MS/MS 2 2 36467000 19967000 16499000 5744 538 6395 14431;14432;14433;14434 13191;13192;13193;13194 13191 985;986 4 SPSDSGYSYETIGK EKIERTTKSPSDSGYS YSYETIGKTTKTPEDG K S P G K T 0 0 0 1 0 0 1 2 0 1 0 1 0 0 1 4 1 0 2 0 0 0 14 0 1489.6573 P46821 P46821 1915 1928 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 3.7971E-35 173.64 By MS/MS By MS/MS 2 2 48154000 25679000 22475000 5745 1712 6396;6397 14435;14436;14437;14438 13195;13196;13197;13198 13198 3180;3181;3182;7612;7613 4 SPSDSSTASTPVAEQIER APTPIPTRSPSDSSTA PVAEQIERALDEVTSS R S P E R A 2 1 0 1 0 1 2 0 0 1 0 0 0 0 2 5 2 0 0 1 0 0 18 0 1860.8701 Q16643;D6R9Q9 Q16643 337 354 DBN1 Drebrin yes no 2 1.503E-18 130.95 By MS/MS By MS/MS 1 2 15147000 4303300 10844000 5746 2019 6398 14439;14440;14441 13199;13200;13201;13202;13203;13204 13200 3945;3946;3947;3948;3949;6845;6846 6 SPSESFIGR PDEPLLQKSPSESFIG PSESFIGREKRSNSQS K S P G R E 0 1 0 0 0 0 1 1 0 1 0 0 0 1 1 3 0 0 0 0 0 0 9 0 978.47706 Q15139;F8WBA3 Q15139 235 243 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 2 0.0055242 84.31 By MS/MS By MS/MS 1 1 11797000 6067400 5729700 5747 1978 6399 14442;14443 13205;13206 13205 3855;3856 2 SPSFASEWDEIEK IGKKRLEKSPSFASEW SEWDEIEKIMSSIGEG K S P E K I 1 0 0 1 0 0 3 0 0 1 0 1 0 1 1 3 0 1 0 0 0 0 13 0 1523.678 Q92625 Q92625 661 673 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2 0.0012547 103.13 By MS/MS By MS/MS 1 1 24922000 13255000 11668000 5748 2430 6400 14444;14445 13207;13208 13207 4889 2 SPSFGGASEASAR GFEPQMVKSPSFGGAS GASEASARTPPQVVQP K S P A R T 3 1 0 0 0 0 1 2 0 0 0 0 0 1 1 4 0 0 0 0 0 0 13 0 1222.5578 H7C2F7;Q8WVT3 H7C2F7 15 27 TRAPPC12 Trafficking protein particle complex subunit 12 yes no 2 0.00062646 108.23 By MS/MS By MS/MS 1 1 13351000 6906800 6444100 5749 1174 6401 14446;14447 13209;13210;13211;13212 13210 2133 4 SPSGGAAGPLLTPSQSLDGSR PTLELASRSPSGGAAG SQSLDGSRRSGYITIG R S P S R R 2 1 0 1 0 1 0 4 0 0 3 0 0 0 3 5 1 0 0 0 0 0 21 0 1953.9756 Q96CX2 Q96CX2 185 205 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 2;3 3.7397E-09 100.45 By MS/MS By MS/MS 3 4 42977000 21561000 21415000 5750 2469 6402 14448;14449;14450;14451;14452;14453;14454 13213;13214;13215;13216;13217 13215 4970;4971;4972;4973;4974;6997 5 SPSGGAAGPLLTPSQSLDGSRR PTLELASRSPSGGAAG QSLDGSRRSGYITIGY R S P R R S 2 2 0 1 0 1 0 4 0 0 3 0 0 0 3 5 1 0 0 0 0 0 22 1 2110.0767 Q96CX2 Q96CX2 185 206 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 3 6.6777E-21 129.05 By MS/MS By MS/MS 2 2 60206000 31572000 28634000 5751 2469 6403;6404 14455;14456;14457;14458 13218;13219;13220;13221 13219 4970;4971;4972;4973;4974;6997 4 SPSGHPHVR NQRGRSPRSPSGHPHV PSGHPHVRRPRSRSRD R S P V R R 0 1 0 0 0 0 0 1 2 0 0 0 0 0 2 2 0 0 0 1 0 0 9 0 972.48896 Q8WX93 Q8WX93 1104 1112 PALLD Palladin yes yes 3 0.0035361 78.513 By MS/MS By MS/MS 1 1 4475700 1637900 2837800 5752 2411 6405 14459;14460 13222;13223 13223 4838 2 SPSGPVKSPPLSPVGTTPVK NHDLTHRKSPSGPVKS PVGTTPVKLKRAAPKE K S P V K L 0 0 0 0 0 0 0 2 0 0 1 2 0 0 6 4 2 0 0 3 0 0 20 1 1931.0728 C9J4K0;Q9BVC5 C9J4K0 140 159 C2orf49 Ashwin yes no 2;3 0.004225 72.772 By MS/MS By MS/MS 2 2 35307000 20439000 14867000 5753 562 6406 14461;14462;14463;14464 13224;13225;13226 13226 1033;1034;1035 3 SPSGSAFGSQENLR TIASPPERSPSGSAFG FGSQENLRWRKDMTHW R S P L R W 1 1 1 0 0 1 1 2 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1435.6692 A0A1B0GWE0;Q96N67 Q96N67 1430 1443 DOCK7 Dedicator of cytokinesis protein 7 no no 2 1.8221E-128 233.28 By MS/MS By MS/MS 3 3 182270000 93422000 88851000 5754 2519;381 6407;6408 14465;14466;14467;14468;14469;14470 13227;13228;13229;13230;13231;13232 13228 724;725;726;5091;5092 6 SPSKPLPEVTDEYK EDKTKIRRSPSKPLPE PEVTDEYKNDVKNRSV R S P Y K N 0 0 0 1 0 0 2 0 0 0 1 2 0 0 3 2 1 0 1 1 0 0 14 1 1588.7985 P05455;E9PGX9;E9PFL9;E7ERC4 P05455 92 105 SSB Lupus La protein yes no 2 0.017182 60.474 By MS/MS By matching 1 1 6334400 3067200 3267200 5755 1526 6409 14471;14472 13233 13233 2814;2815 1 SPSKPLPEVTDEYKNDVK EDKTKIRRSPSKPLPE DEYKNDVKNRSVYIKG R S P V K N 0 0 1 2 0 0 2 0 0 0 1 3 0 0 3 2 1 0 1 2 0 0 18 2 2045.0317 P05455;E9PGX9;E9PFL9;E7ERC4 P05455 92 109 SSB Lupus La protein yes no 3 0.00072199 73.809 By MS/MS By MS/MS 1 1 9803900 5192600 4611200 5756 1526 6410 14473;14474 13234;13235 13234 2814;2815 2 SPSLGSDLTFATR VHSGSGCRSPSLGSDL SDLTFATRTGSRQGIE R S P T R T 1 1 0 1 0 0 0 1 0 0 2 0 0 1 1 3 2 0 0 0 0 0 13 0 1350.6779 Q13425 Q13425 393 405 SNTB2 Beta-2-syntrophin yes yes 2 0.016074 60.901 By MS/MS By matching 1 1 1841600 904690 936930 5757 1914 6411 14475;14476 13236 13236 3673 1 SPSLNLLQNK PEILVVSRSPSLNLLQ SLNLLQNKSM______ R S P N K S 0 0 2 0 0 1 0 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 0 1112.619 O43353 O43353 529 538 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 2 1.6053E-20 174.23 By MS/MS By MS/MS 1 1 10455000 5287400 5167900 5758 1380 6412 14477;14478 13237;13238;13239;13240;13241;13242 13241 2526 6 SPSLSPSPPSPLEK SEKVSPSKSPSLSPSP SPPSPLEKTPLGERSV K S P E K T 0 0 0 0 0 0 1 0 0 0 2 1 0 0 5 5 0 0 0 0 0 0 14 0 1421.7402 P46821 P46821 1256 1269 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.468E-20 157.68 By matching By MS/MS 1 1 13789000 609440 13180000 5759 1712 6413 14479;14480 13243;13244;13245 13245 3183 3 SPSLSPSPPSPLEKTPLGER SEKVSPSKSPSLSPSP EKTPLGERSVNFSLTP K S P E R S 0 1 0 0 0 0 2 1 0 0 3 1 0 0 6 5 1 0 0 0 0 0 20 1 2075.0899 P46821 P46821 1256 1275 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 2.1852E-13 112.58 By MS/MS By MS/MS 1 2 11057000 5003700 6053400 5760 1712 6414 14481;14482;14483 13246;13247;13248 13248 3183 3 SPSMPENLNRPR VSRSGLYRSPSMPENL PENLNRPRLKQVEKFK R S P P R L 0 2 2 0 0 0 1 0 0 0 1 0 1 0 3 2 0 0 0 0 0 0 12 1 1396.6881 P30307;D6RJC2;H0Y999 P30307 214 225 CDC25C M-phase inducer phosphatase 3 yes no 2;3 0.015342 62.924 By MS/MS 2 8660200 0 8660200 5761 1654 6415 14484;14485 13249;13250 13250 3056 2 SPSPAHLPDDPK AVSATYERSPSPAHLP AHLPDDPKVAEKQRET R S P P K V 1 0 0 2 0 0 0 0 1 0 1 1 0 0 4 2 0 0 0 0 0 0 12 0 1259.6146 H0Y4V9;Q92615;H0Y641;A0A087X183 H0Y4V9 165 176 LARP4B La-related protein 4B yes no 2 0.0010839 101.38 By MS/MS By MS/MS 1 1 16686000 9006900 7679500 5762 1020 6416 14486;14487 13251;13252;13253 13251 1890 3 SPSPAPPPR PPPTRRRRSPSPAPPP PSPAPPPRRRRTPTPP R S P P R R 1 1 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 9 0 904.47667 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 569 577 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2 0.0021118 93.442 By MS/MS By MS/MS 1 1 15856000 9262500 6593600 5763 442;1311 6417 14488;14489 13254;13255;13256;13257 13255 853;854 4 SPSPGLFR FPTAGGFRSPSPGLFR SPSPGLFRASLVSSAS R S P F R A 0 1 0 0 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 0 0 8 0 859.4552 E7ESG2;Q9HAW4 E7ESG2 755 762 CLSPN Claspin yes no 2 0.011444 85.67 By MS/MS By MS/MS 1 2 13509000 4157000 9351600 5764 731 6418 14490;14491;14492 13258;13259;13260 13259 1308;1309 3 SPSPPLPTHIPPEPPRTPPFPAK LLPMISPRSPSPPLPT RTPPFPAKTFQVVPEI R S P A K T 1 1 0 0 0 0 1 0 1 1 1 1 0 1 11 2 2 0 0 0 0 0 23 1 2456.3216 Q8IZ21 Q8IZ21 342 364 PHACTR4 Phosphatase and actin regulator 4 yes yes 3 0.00023624 68.189 By MS/MS By matching 2 1 7236600 6166500 1070100 5765 2291 6419 14493;14494;14495 13261;13262 13261 4597;6952 1 SPSPPTQHTGQPPGQPSAPSQLSAPR LSPKPPTRSPSPPTQH PSQLSAPRRYSSSLSP R S P P R R 2 1 0 0 0 4 0 2 1 0 1 0 0 0 8 5 2 0 0 0 0 0 26 0 2606.2837 I3L460;Q68EM7 I3L460 42 67 ARHGAP17 Rho GTPase-activating protein 17 yes no 3 1.2481E-11 90.468 By MS/MS By MS/MS 1 1 91724000 50378000 41347000 5766 1215 6420 14496;14497 13263;13264;13265;13266 13264 2200;6557 4 SPSPSPTSPGSLR LSTPRSGKSPSPSPTS PTSPGSLRKQRDLYRP K S P L R K 0 1 0 0 0 0 0 1 0 0 1 0 0 0 4 5 1 0 0 0 0 0 13 0 1268.6361 Q5VZY9;O15075 Q5VZY9 330 342 DCLK1 Serine/threonine-protein kinase DCLK1 yes no 2 0.0013519 94.023 By MS/MS By MS/MS 1 1 7782500 4110900 3671600 5767 2126 6421 14498;14499 13267;13268 13267 4233 2 SPSSCNDLYATVK SIQGDPQRSPSSCNDL NDLYATVKDFEKTPNS R S P V K D 1 0 1 1 1 0 0 0 0 0 1 1 0 0 1 3 1 0 1 1 0 0 13 0 1440.6555 Q9NWQ8 Q9NWQ8 351 363 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 1.5744E-16 163.46 By MS/MS By MS/MS 1 1 41515000 23453000 18062000 5768 2746 6422 14500;14501 13269;13270 13270 7910 2 SPSSDLDTDAEGDDFELLDQSELSQLDPASSR RATRGFLRSPSSDLDT QLDPASSRSH______ R S P S R S 2 1 0 7 0 2 3 1 0 0 5 0 0 1 2 7 1 0 0 0 0 0 32 0 3438.507 Q86VR2;K7EQI9 Q86VR2 433 464 FAM134C Protein FAM134C yes no 3 0.031134 45.685 By MS/MS 1 19466000 19466000 0 5769 2245 6423 14502 13271 13271 1 SPSSEWLVR TPASQAPKSPSSEWLV PSSEWLVRTSAAEKAT K S P V R T 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 1 0 1 0 0 9 0 1059.5349 Q9NWQ4 Q9NWQ4 447 455 GPATCH2L G patch domain-containing protein 2-like yes yes 2 0.013737 69.812 By MS/MS By MS/MS 1 1 2920300 1484500 1435800 5770 2745 6424 14503;14504 13272;13273 13273 5622 2 SPSSSVGSPPVLYMQPSPL SSFDTHFRSPSSSVGS LYMQPSPL________ R S P P L - 0 0 0 0 0 1 0 1 0 0 2 0 1 0 5 6 0 0 1 2 0 0 19 0 1928.9554 F5H148;Q9NYV6 F5H148 603 621 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 yes no 2 0.029473 41.401 By MS/MS 1 0 0 0 5771 874 6425 14505 13274 13274 7400 1 SPSSVTGNALWK TYVKENARSPSSVTGN VTGNALWKAMEKSSLT R S P W K A 1 0 1 0 0 0 0 1 0 0 1 1 0 0 1 3 1 1 0 1 0 0 12 0 1245.6354 Q9NYB0 Q9NYB0 154 165 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 2 0.005023 75.088 By matching By MS/MS 1 1 4891500 3190900 1700500 5772 2756 6426 14506;14507 13275 13275 5634 1 SPSTTYLHTPTPSEDAAIPSK SNHTGSPRSPSTTYLH EDAAIPSKSRLKRLIS R S P S K S 2 0 0 1 0 0 1 0 1 1 1 1 0 0 4 4 4 0 1 0 0 0 21 0 2199.0695 Q13111 Q13111 775 795 CHAF1A Chromatin assembly factor 1 subunit A yes yes 3 0.0056242 51.398 By MS/MS 1 8431600 0 8431600 5773 1896 6427 14508 13276 13276 3619 1 SPSVPKSPTPKSPPSR AMATSPQKSPSVPKSP TPKSPPSRKKDDSFLG K S P S R K 0 1 0 0 0 0 0 0 0 0 0 2 0 0 6 5 1 0 0 1 0 0 16 2 1647.8944 J3KNQ4;Q9NVD7 J3KNQ4 48 63 PARVA Alpha-parvin yes no 3 0.00064459 81.665 By MS/MS By MS/MS 1 1 15039000 7652200 7387000 5774 1226 6428 14509;14510 13277;13278 13277 2218;2219;2220 2 SPSWTAPPVIALQNGLSEDEALQR SPSRATTRSPSWTAPP SEDEALQRALEMSLAE R S P Q R A 3 1 1 1 0 2 2 1 0 1 3 0 0 0 3 3 1 1 0 1 0 0 24 0 2578.3027 A0A087X0D9;E9PFU9;Q8WV99 A0A087X0D9 137 160 ZFAND2B AN1-type zinc finger protein 2B yes no 3 0.0045324 49.577 By MS/MS 1 4534300 4534300 0 5775 125 6429 14511 13279 13279 220;221;6252 1 SPTGPSNSFLANMGGTVAHK YEEQDRPRSPTGPSNS MGGTVAHKIMQKYGFR R S P H K I 2 0 2 0 0 0 0 3 1 0 1 1 1 1 2 3 2 0 0 1 0 0 20 0 1971.9473 H0Y6J6;Q5W012;Q96I25 H0Y6J6 129 148 RBM17 Splicing factor 45 yes no 3 0.00045077 72.317 By MS/MS By MS/MS 1 1 18172000 10098000 8073500 5776 1032 6430 14512;14513 13280;13281 13280 1922;6515 2 SPTKAPHLQLIEGK GDGRREVRSPTKAPHL HLQLIEGKKNSLRVEG R S P G K K 1 0 0 0 0 1 1 1 1 1 2 2 0 0 2 1 1 0 0 0 0 0 14 1 1517.8566 O43491;E9PK52;E9PHY5;H0Y5B0;E9PII3 O43491 598 611 EPB41L2 Band 4.1-like protein 2 yes no 2 0.025347 74.966 By matching By MS/MS 1 1 6813900 4147200 2666700 5777 1387 6431 14514;14515 13282 13282 2538;6615 1 SPTKSSLDYR ESQLSFRRSPTKSSLD TKSSLDYRRLPDAHSD R S P Y R R 0 1 0 1 0 0 0 0 0 0 1 1 0 0 1 3 1 0 1 0 0 0 10 1 1152.5775 Q96PK6 Q96PK6 627 636 RBM14 RNA-binding protein 14 yes yes 2 0.0033144 87.641 By MS/MS By MS/MS 1 1 24956000 11872000 13084000 5778 2524 6432 14516;14517 13283;13284 13284 5098 2 SPTMEQAVQTASAHLPAPAAVGR PQLDPLRKSPTMEQAV PAPAAVGRRSPVSTRP K S P G R R 6 1 0 0 0 2 1 1 1 0 1 0 1 0 3 2 2 0 0 2 0 0 23 0 2289.1536 Q8ND56 Q8ND56 192 214 LSM14A Protein LSM14 homolog A yes yes 3 0.00019244 69.284 By MS/MS By MS/MS 1 1 13265000 6971400 6293800 5779 2340 6433 14518;14519 13285;13286 13286 4692 2 SPTPPLFSLPEAR ________________ LFSLPEARTRFTKSTR M S P A R T 1 1 0 0 0 0 1 0 0 0 2 0 0 1 4 2 1 0 0 0 0 0 13 0 1410.7507 J3KRD7;J3QQZ3;J3KT14;A0A087WWS1;Q96FV9 J3KRD7 2 14 THOC1 THO complex subunit 1 yes no 2 0.0047502 73.885 By MS/MS 1 889700 0 889700 5780 82 6434 14520 13287 13287 156 1 SPTPTVNPR PTTNKPVKSPTPTVNP PTPTVNPRKKLWAFPS K S P P R K 0 1 1 0 0 0 0 0 0 0 0 0 0 0 3 1 2 0 0 1 0 0 9 0 967.50869 C9JA69;Q8WY36;C9JYU6;C9JZA0;C9J8D0 C9JA69 159 167 BBX HMG box transcription factor BBX yes no 2 0.012055 71.877 By MS/MS 1 5539300 5539300 0 5781 578 6435 14521 13288 13288 1056 1 SPTSPLNMK FIQPSAQKSPTSPLNM PTSPLNMKLGRPRIKK K S P M K L 0 0 1 0 0 0 0 0 0 0 1 1 1 0 2 2 1 0 0 0 0 0 9 0 973.49027 A0A0A0MRP6;B7ZLQ5;P28370 A0A0A0MRP6 116 124 SMARCA1 Probable global transcription activator SNF2L1 yes no 2 0.014485 97.813 By MS/MS By MS/MS 1 1 33934000 18495000 15439000 5782 196 6436 14522;14523 13289;13290 13289 357;358;6274 2 SPVPKSPVEEK VEKPEKAKSPVPKSPV PKSPVEEKGKSPVSKS K S P E K G 0 0 0 0 0 0 2 0 0 0 0 2 0 0 3 2 0 0 0 2 0 0 11 1 1195.6449 E7ESP9;P07197 E7ESP9 615 625 NEFM Neurofilament medium polypeptide yes no 2;3 0.0049382 69.345 By MS/MS By MS/MS 2 2 20640000 10229000 10412000 5783 734 6437 14524;14525;14526;14527 13291;13292;13293 13293 1312 2 SPVPSPGSSSPQLQVK PLLLVGDRSPVPSPGS SSPQLQVKSSCKENPF R S P V K S 0 0 0 0 0 2 0 1 0 0 1 1 0 0 4 5 0 0 0 2 0 0 16 0 1593.8362 Q8N3F8 Q8N3F8 612 627 MICALL1 MICAL-like protein 1 yes yes 2 4.4947E-06 111.81 By MS/MS By MS/MS 1 1 39991000 24570000 15421000 5784 2305 6438 14528;14529 13294;13295;13296;13297 13294 4629 4 SPVSPLAAQGIPLPAQLTK MSRLSLTRSPVSPLAA PLPAQLTKSNAPVHID R S P T K S 3 0 0 0 0 2 0 1 0 1 3 1 0 0 4 2 1 0 0 1 0 0 19 0 1887.0829 K7EIF1;K7EPF0;K7EQS3;K7EM48;K7EN63;Q96SI1 K7EIF1 35 53 KCTD15 BTB/POZ domain-containing protein KCTD15 yes no 2;3 1.3701E-46 169.49 By MS/MS By MS/MS 2 2 43575000 25602000 17973000 5785 1264 6439 14530;14531;14532;14533 13298;13299;13300 13300 2294;2295 3 SPVSSLQIR PRGSLSPRSPVSSLQI PVSSLQIRYDQPG___ R S P I R Y 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 3 0 0 0 1 0 0 9 0 985.55564 Q5JT35;P55197 Q5JT35 348 356 MLLT10 Protein AF-10 yes no 2 0.012926 70.808 By MS/MS By matching 1 1 4174200 2567700 1606500 5786 1774 6440 14534;14535 13301 13301 3344 1 SPVSTRPLPSASQK APAAVGRRSPVSTRPL PLPSASQKAGENQEHR R S P Q K A 1 1 0 0 0 1 0 0 0 0 1 1 0 0 3 4 1 0 0 1 0 0 14 1 1453.7889 Q8ND56 Q8ND56 216 229 LSM14A Protein LSM14 homolog A yes yes 2;3 1.4334E-14 145.7 By MS/MS By MS/MS 3 2 627410000 349190000 278220000 5787 2340 6441;6442 14536;14537;14538;14539;14540 13302;13303;13304;13305;13306 13305 4689;4690 5 SPVVELSKVPLVQRGSANGL PKMKNKPRSPVVELSK QRGSANGL________ R S P G L - 1 1 1 0 0 1 1 2 0 0 3 1 0 0 2 3 0 0 0 4 0 0 20 2 2049.1582 P25098 P25098 670 689 ADRBK1 Beta-adrenergic receptor kinase 1 yes yes 3 0.011474 50.029 By MS/MS By matching 1 1 4861200 3078600 1782600 5788 1630 6443 14541;14542 13307 13307 3017;3018 1 SPVVSEQTAK PKSLGLSRSPVVSEQT VVSEQTAKGPIAAGTS R S P A K G 1 0 0 0 0 1 1 0 0 0 0 1 0 0 1 2 1 0 0 2 0 0 10 0 1044.5451 Q8NEZ4 Q8NEZ4 1987 1996 KMT2C Histone-lysine N-methyltransferase 2C yes yes 2 0.017727 65.627 By MS/MS 1 0 0 0 5789 2351 6444 14543 13308 13308 4713 1 SPVVSGDTSPR HGAEIVYKSPVVSGDT VSGDTSPRHLSNVSST K S P P R H 0 1 0 1 0 0 0 1 0 0 0 0 0 0 2 3 1 0 0 2 0 0 11 0 1100.5462 I3L170;A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636 I3L170 296 306 MAPT Microtubule-associated protein;Microtubule-associated protein tau yes no 2 6.0669E-06 126.5 By MS/MS 1 9573400 9573400 0 5790 323 6445 14544 13309 13309 609 1 SPYEAENSGEELDQR MSNIASVKSPYEAENS SGEELDQRYSKAKPMC K S P Q R Y 1 1 1 1 0 1 4 1 0 0 1 0 0 0 1 2 0 0 1 0 0 0 15 0 1722.7333 R4GMT1;Q9NPC7 R4GMT1 20 34 MYNN Myoneurin yes no 2 0.00043203 89.911 By MS/MS By matching 1 1 6525400 3409800 3115600 5791 2703 6446 14545;14546 13310 13310 5513 1 SQAKPGTPGGTGGPAPQY LASVQHMKSQAKPGTP TGGPAPQY________ K S Q Q Y - 2 0 0 0 0 2 0 5 0 0 0 1 0 0 4 1 2 0 1 0 0 0 18 1 1669.806 Q96L35;P54760 Q96L35 918 935 EPHB4 Receptor protein-tyrosine kinase;Ephrin type-B receptor 4 yes no 2 2.7236E-09 117.03 By MS/MS 1 17619000 0 17619000 5792 1768 6447 14547 13311 13311 7645 1 SQALGQSAPSLTASLK TSNLVRMRSQALGQSA PSLTASLKELSLPRRG R S Q L K E 3 0 0 0 0 2 0 1 0 0 3 1 0 0 1 4 1 0 0 0 0 0 16 0 1557.8362 J3QT34;O15021;H7C0U3;H7C2V7;H7C3S4;E7EX28 J3QT34 200 215 MAST4 Microtubule-associated serine/threonine-protein kinase 4 yes no 2 0.0040986 86.814 By MS/MS 1 1815600 1815600 0 5793 1261 6448 14548 13312 13312 2287 0 SQANGAGALSYVSPNTSK REQYDEKRSQANGAGA YVSPNTSKCPVTIPED R S Q S K C 3 0 2 0 0 1 0 2 0 0 1 1 0 0 1 4 1 0 1 1 0 0 18 0 1750.8486 O95453;F5H1Z4 O95453 151 168 PARN Poly(A)-specific ribonuclease PARN yes no 2 0.017539 52.009 By MS/MS By matching 1 1 6994800 3497300 3497500 5794 1490 6449 14549;14550 13313 13313 2763 1 SQAQQPQKEAALSS ESQKILQRSQAQQPQK QKEAALSS________ R S Q S S - 3 0 0 0 0 4 1 0 0 0 1 1 0 0 1 3 0 0 0 0 0 0 14 1 1471.7267 Q3MHD2 Q3MHD2 182 195 LSM12 Protein LSM12 homolog yes yes 2 2.0137E-20 157.37 By MS/MS By MS/MS 1 1 18276000 8816600 9459800 5795 2037 6450 14551;14552 13314;13315;13316 13315 3991;3992 3 SQASMVINSDTDDEEEVSAALTLAHLK PQAVPLEKSQASMVIN ALTLAHLKESQPAIWN K S Q L K E 4 0 1 3 0 1 3 0 1 1 3 1 1 0 0 4 2 0 0 2 0 0 27 0 2873.36 Q14676 Q14676 394 420 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 1.708E-05 67.33 By MS/MS By matching 1 1 12638000 9511600 3126500 5796 1951 6451 14553;14554 13317 13317 262 3778;6818 1 SQDADSPGSSGAPENLTFK DAKEKRSKSQDADSPG APENLTFKERQRLFSQ K S Q F K E 2 0 1 2 0 1 1 2 0 0 1 1 0 1 2 4 1 0 0 0 0 0 19 0 1906.8545 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1731 1749 MLLT4 Afadin yes no 2 0.00095335 73.294 By MS/MS By matching 1 1 11491000 6720000 4770900 5797 431 6452 14555;14556 13318;13319 13318 818 2 SQDATFSPGSEQAEKSPGPIVSR SPRRMMTRSQDATFSP SPGPIVSRTRSWDSSS R S Q S R T 2 1 0 1 0 2 2 2 0 1 0 1 0 1 3 5 1 0 0 1 0 0 23 1 2374.1401 C9J0I9;Q86WB0 C9J0I9 286 308 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 3.1472E-33 130.89 By MS/MS By MS/MS 4 4 753250000 417100000 336140000 5798 551 6453;6454;6455 14557;14558;14559;14560;14561;14562;14563;14564 13320;13321;13322;13323;13324;13325;13326 13320 1007;1008;1009 7 SQDLGVQFPGDR AVVRQVRRSQDLGVQF GVQFPGDRALTFYEGV R S Q D R A 0 1 0 2 0 2 0 2 0 0 1 0 0 1 1 1 0 0 0 1 0 0 12 0 1317.6313 I3L2J0 I3L2J0 227 238 CIC yes yes 2 0.0039693 84.173 By MS/MS 1 0 0 0 5799 1207 6456 14565 13327 13327 2192 1 SQDQDSEVNELSR EDRASEPKSQDQDSEV SEVNELSRGPTSSPCE K S Q S R G 0 1 1 2 0 2 2 0 0 0 1 0 0 0 0 3 0 0 0 1 0 0 13 0 1505.6594 E7ERS3;Q86VM9 E7ERS3 78 90 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.020071 74.475 By MS/MS 1 0 0 0 5800 727 6457 14566 13328 13328 1304 1 SQDSYPGSPSLSPR SLSSRSPKSQDSYPGS GSPSLSPRHGPSSSHM K S Q P R H 0 1 0 1 0 1 0 1 0 0 1 0 0 0 3 5 0 0 1 0 0 0 14 0 1476.6845 A0A0D9SEU5;R4GMX8;Q6VN20 A0A0D9SEU5 358 371 RANBP10 Ran-binding protein 10 yes no 2 2.8696E-05 119.62 By MS/MS By MS/MS 4 2 35492000 19623000 15868000 5801 308 6458;6459;6460 14567;14568;14569;14570;14571;14572 13329;13330;13331;13332;13333;13334;13335 13334 557;558;559;7225 6 SQDVAVSPQQQQCSK IPKRTDVKSQDVAVSP PQQQQCSKSYVDRHME K S Q S K S 1 0 0 1 1 5 0 0 0 0 0 1 0 0 1 3 0 0 0 2 0 0 15 0 1688.7788 H3BQ37;H3BPW9;Q96F86;H3BTD6 H3BQ37 125 139 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2;3 3.5562E-165 242.67 By MS/MS By MS/MS 2 2 101970000 52517000 49450000 5802 1126 6461 14573;14574;14575;14576 13336;13337;13338;13339 13337 2058 4 SQEADVQDWEFR PAQLGTQRSQEADVQD DVQDWEFRKRDSQGTY R S Q F R K 1 1 0 2 0 2 2 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 12 0 1508.6532 Q9C0C2 Q9C0C2 836 847 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 1.744E-14 162.93 By MS/MS By MS/MS 1 1 48332000 28463000 19870000 5803 2615 6462 14577;14578 13340;13341 13340 5303 2 SQEDEISSPVNK ILKRGLKRSQEDEISS EISSPVNKVRRVSFAD R S Q N K V 0 0 1 1 0 1 2 0 0 1 0 1 0 0 1 3 0 0 0 1 0 0 12 0 1331.6205 Q5UIP0;H7C2B5 Q5UIP0 2189 2200 RIF1 Telomere-associated protein RIF1 yes no 2 7.0495E-09 133.98 By MS/MS By MS/MS 1 1 38553000 21572000 16981000 5804 2112 6463 14579;14580 13342;13343 13342 4180;4181 2 SQEDEISSPVNKVR ILKRGLKRSQEDEISS SSPVNKVRRVSFADPI R S Q V R R 0 1 1 1 0 1 2 0 0 1 0 1 0 0 1 3 0 0 0 2 0 0 14 1 1586.79 Q5UIP0;H7C2B5 Q5UIP0 2189 2202 RIF1 Telomere-associated protein RIF1 yes no 2;3 0.00059692 96.673 By MS/MS By MS/MS 2 2 115910000 63569000 52337000 5805 2112 6464 14581;14582;14583;14584 13344;13345;13346 13344 4180;4181 3 SQEELREDKAYQLER IAIQRVTRSQEELRED DKAYQLERHRIEAAMD R S Q E R H 1 2 0 1 0 2 4 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 15 2 1892.9228 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1234 1248 MLLT4 Afadin yes no 3 0.00010301 95.755 By MS/MS By MS/MS 1 1 25287000 14208000 11079000 5806 431 6465 14585;14586 13347;13348 13348 7269 2 SQEPIPDDQKVSDDDKEK EERASLLKSQEPIPDD VSDDDKEKGEGALPTG K S Q E K G 0 0 0 5 0 2 2 0 0 1 0 3 0 0 2 2 0 0 0 1 0 0 18 2 2071.9546 E5RJU9;Q86UE4;H0YBJ8 E5RJU9 359 376 MTDH Protein LYRIC yes no 3 0.00023557 76.678 By MS/MS By MS/MS 1 1 22336000 11969000 10367000 5807 701 6466 14587;14588 13349;13350 13349 1242 2 SQEPIYSEEASGPRSPLDMVSSR PPSLALSRSQEPIYSE PLDMVSSRSSDAARPV R S Q S R S 1 2 0 1 0 1 3 1 0 1 1 0 1 0 3 6 0 0 1 1 0 0 23 1 2521.1755 Q5T011 Q5T011 2122 2144 SZT2 Protein SZT2 yes yes 3 0.0077546 48.315 By MS/MS By matching 1 1 14637000 8852500 5785000 5808 2091 6467 14589;14590 13351 13351 4127 1 SQERPGNFYVSSESIR IFKVFAEKSQERPGNF YVSSESIRKGPPVRPW K S Q I R K 0 2 1 0 0 1 2 1 0 1 0 0 0 1 1 4 0 0 1 1 0 0 16 1 1854.886 Q6ZUJ8 Q6ZUJ8 562 577 PIK3AP1 Phosphoinositide 3-kinase adapter protein 1 yes yes 3 0.00046208 77.191 By MS/MS By MS/MS 1 1 4106200 2300100 1806100 5809 2185 6468 14591;14592 13352;13353 13353 7763 2 SQGDEAGGHGEDRPEPLSPK QDAGPLERSQGDEAGG RPEPLSPKESKKRKLE R S Q P K E 1 1 0 2 0 1 3 4 1 0 1 1 0 0 3 2 0 0 0 0 0 0 20 1 2061.9352 A0A0A0MRN5;Q9NZT2 A0A0A0MRN5 309 328 OGFR Opioid growth factor receptor yes no 3 0.0028829 58.427 By MS/MS By matching 1 1 42001000 26301000 15701000 5810 194 6469 14593;14594 13354 13354 349 1 SQHFFDTSVPLMDDGDDNTLYHR RMKNREERSQHFFDTS DDNTLYHRRTS_____ R S Q H R R 0 1 1 5 0 1 0 1 2 0 2 0 1 2 1 2 2 0 1 1 0 0 23 0 2709.1765 Q96NX8;F8W9Z6;B7ZBM8;H3BU86;O14662 Q96NX8 177 199 STX16;STX16-NPEPL1 Syntaxin-16 yes no 3 6.6611E-09 85.35 By matching By MS/MS 1 1 10967000 6024300 4943200 5811 521 6470 14595;14596 13355 13355 6362 1 SQIHDIVLVGGSTR LRDAKLDKSQIHDIVL VLVGGSTRIPKIQKLL K S Q T R I 0 1 0 1 0 1 0 2 1 2 1 0 0 0 0 2 1 0 0 2 0 0 14 0 1480.7998 P11142;E9PKE3;E9PN89;E9PNE6;A8K7Q2 P11142 329 342 HSPA8 Heat shock cognate 71 kDa protein yes no 3 0.020837 53.403 By MS/MS 1 859810 0 859810 5812 1560 6471 14597 13356 13356 1 SQKTPTSPLSPSSQK SVSSDKGRSQKTPTSP PLSPSSQKSLQFDVAG R S Q Q K S 0 0 0 0 0 2 0 0 0 0 1 2 0 0 3 5 2 0 0 0 0 0 15 1 1571.8155 Q5VT06 Q5VT06 1250 1264 CEP350 Centrosome-associated protein 350 yes yes 2 0.0039604 78.932 By MS/MS By matching 1 1 5365900 3034700 2331200 5813 2114 6472 14598;14599 13357 13357 4186;4187;6888 1 SQLPTLEQDGGTQNPVSSPGMSQELR KCQELALRSQLPTLEQ PGMSQELRTMTTNSSD R S Q L R T 0 1 1 1 0 4 2 3 0 0 3 0 1 0 3 4 2 0 0 1 0 0 26 0 2755.3083 P46937;H0YCI3 P46937 350 375 YAP1 Transcriptional coactivator YAP1 yes no 3 0.019896 40.717 By MS/MS By matching 1 1 35975000 22068000 13907000 5814 1713 6473 14600;14601 13358 13358 3196;3197 1 SQNHSRSPSEERGHSTR ENDFKHHRSQNHSRSP EERGHSTRHHTKGSRT R S Q T R H 0 3 1 0 0 1 2 1 2 0 0 0 0 0 1 5 1 0 0 0 0 0 17 2 1950.9005 Q9H0G5;A0A024QZ33 Q9H0G5 285 301 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 yes no 3;4 0.020035 45.885 By matching By MS/MS 2 2 20203000 4212000 15991000 5815 2627 6474;6475 14602;14603;14604;14605 13359;13360 13359 5340;5341;5342;5343 2 SQNRQATFSGRTK PPVSRKAKSQNRQATF ATFSGRTKSSYKSILP K S Q T K S 1 2 1 0 0 2 0 1 0 0 0 1 0 1 0 2 2 0 0 0 0 0 13 2 1479.7542 Q8IWI9;H3BP52;H3BTF4 Q8IWI9 900 912 MGA MAX gene-associated protein yes no 2 0.020551 47.228 By MS/MS By matching 1 1 10659000 7530100 3129100 5816 2268 6476 14606;14607 13361 13361 1 SQPLTSPESR EELRRNMRSQPLTSPE PLTSPESRTARGGSQM R S Q S R T 0 1 0 0 0 1 1 0 0 0 1 0 0 0 2 3 1 0 0 0 0 0 10 0 1100.5462 P46939 P46939 1400 1409 UTRN Utrophin yes yes 2 0.013035 67.997 By matching By MS/MS 1 1 6762900 3344900 3418000 5817 1714 6477 14608;14609 13362 13362 3198 1 SQQQPTPVTPK YSTRRVTRSQQQPTPV QPTPVTPKKYPLRQTR R S Q P K K 0 0 0 0 0 3 0 0 0 0 0 1 0 0 3 1 2 0 0 1 0 0 11 0 1209.6354 O95251 O95251 80 90 KAT7 Histone acetyltransferase KAT7 yes yes 2 3.6782E-05 139.19 By MS/MS By MS/MS 1 1 58221000 35859000 22362000 5818 1482 6478 14610;14611 13363;13364 13364 6646 2 SQRLSTASVIQAR TGMGRPPRSQRLSTAS TASVIQARYQGLVDGR R S Q A R Y 2 2 0 0 0 2 0 0 0 1 1 0 0 0 0 3 1 0 0 1 0 0 13 1 1415.7845 Q96JB3 Q96JB3 162 174 HIC2 Hypermethylated in cancer 2 protein yes yes 3 0.0011035 85.563 By MS/MS By MS/MS 1 1 5561600 3919300 1642300 5819 2505 6479 14612;14613 13365;13366 13365 5042;5043;7005 2 SQRYSGAYGASVSDEELK ESSPSGSKSQRYSGAY SVSDEELKRRVAEELA K S Q L K R 2 1 0 1 0 1 2 2 0 0 1 1 0 0 0 4 0 0 2 1 0 0 18 1 1945.9017 C9JRZ6;F8WAR4;Q9NX63 C9JRZ6 46 63 CHCHD3 MICOS complex subunit MIC19 yes no 2 0.010181 58.49 By matching By MS/MS 1 1 15474000 7743000 7730800 5820 607 6480 14614;14615 13367 13367 1109;1110 1 SQRYSGAYGASVSDEELKR ESSPSGSKSQRYSGAY VSDEELKRRVAEELAL K S Q K R R 2 2 0 1 0 1 2 2 0 0 1 1 0 0 0 4 0 0 2 1 0 0 19 2 2102.0029 C9JRZ6;F8WAR4;Q9NX63 C9JRZ6 46 64 CHCHD3 MICOS complex subunit MIC19 yes no 3 5.2096E-39 160.98 By MS/MS By MS/MS 1 1 20443000 13525000 6918000 5821 607 6481 14616;14617 13368;13369 13368 1109;1110 2 SQSESSDEVTELDLSHGK RQRSRLLRSQSESSDE ELDLSHGKKDAFVLEI R S Q G K K 0 0 0 2 0 1 3 1 1 0 2 1 0 0 0 5 1 0 0 1 0 0 18 0 1946.8705 Q86YS7 Q86YS7 657 674 C2CD5 C2 domain-containing protein 5 yes yes 3 0.0038218 57.197 By MS/MS By matching 1 1 7669200 4787900 2881300 5822 2258 6482 14618;14619 13370 13370 4531;4532;4533 1 SQSESSDEVTELDLSHGKK RQRSRLLRSQSESSDE LDLSHGKKDAFVLEID R S Q K K D 0 0 0 2 0 1 3 1 1 0 2 2 0 0 0 5 1 0 0 1 0 0 19 1 2074.9655 Q86YS7 Q86YS7 657 675 C2CD5 C2 domain-containing protein 5 yes yes 2;3 2.3769E-05 80.453 By MS/MS By MS/MS 2 2 60505000 31460000 29046000 5823 2258 6483 14620;14621;14622;14623 13371;13372;13373;13374 13373 4531;4532;4533 4 SQSETSLLGR PRARKASRSQSETSLL SETSLLGRASAVPSGP R S Q G R A 0 1 0 0 0 1 1 1 0 0 2 0 0 0 0 3 1 0 0 0 0 0 10 0 1076.5462 A0A0C4DFP1;Q96B18 A0A0C4DFP1 199 208 DACT3 Dapper homolog 3 yes no 2 0.00068481 108.56 By MS/MS By matching 1 1 6632500 4194100 2438400 5824 264 6484 14624;14625 13375 13375 483 1 SQSEYKPDTPQSGLEYSGIQELEDR DRNSILPKSQSEYKPD GIQELEDRRSQQRFQF K S Q D R R 0 1 0 2 0 3 4 2 0 1 2 1 0 0 2 4 1 0 2 0 0 0 25 1 2855.3097 Q16513 Q16513 620 644 PKN2 Serine/threonine-protein kinase N2 yes yes 3 2.92E-20 116.2 By MS/MS By MS/MS 1 1 45865000 20017000 25849000 5825 2016 6485 14626;14627 13376;13377 13376 3940;7724 2 SQSEYKPDTPQSGLEYSGIQELEDRR DRNSILPKSQSEYKPD IQELEDRRSQQRFQFN K S Q R R S 0 2 0 2 0 3 4 2 0 1 2 1 0 0 2 4 1 0 2 0 0 0 26 2 3011.4108 Q16513 Q16513 620 645 PKN2 Serine/threonine-protein kinase N2 yes yes 3;4 2.2748E-06 74.703 By matching By MS/MS 2 2 64059000 32444000 31614000 5826 2016 6486 14628;14629;14630;14631 13378;13379 13379 3940;7724 2 SQSFFAAAR ERRRPQSRSQSFFAAA QSFFAAARAAVSAFPT R S Q A R A 3 1 0 0 0 1 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 9 0 983.48248 O14654 O14654 1089 1097 IRS4 Insulin receptor substrate 4 yes yes 2 0.0024693 114.51 By MS/MS By MS/MS 2 2 49225000 25344000 23881000 5827 1343 6487 14632;14633;14634;14635 13380;13381;13382;13383 13381 2442 4 SQSFTHSPSGDPK EDTPRKKRSQSFTHSP HSPSGDPKADKRRGPT R S Q P K A 0 0 0 1 0 1 0 1 1 0 0 1 0 1 2 4 1 0 0 0 0 0 13 0 1373.6212 J3KQR7;Q9Y4F5 J3KQR7 420 432 CEP170B Centrosomal protein of 170 kDa protein B yes no 2 0.0027911 89.26 By MS/MS By MS/MS 1 1 8348700 3503400 4845300 5828 1235 6488 14636;14637 13384;13385 13384 2238 1 SQSGTLDGESAAWSASGEDSR LSPEVKARSQSGTLDG SASGEDSRGQPEGPLP R S Q S R G 3 1 0 2 0 1 2 3 0 0 1 0 0 0 0 6 1 1 0 0 0 0 21 0 2096.8883 P49815;H3BMQ0;H3BQK4 P49815 1418 1438 TSC2 Tuberin yes no 2 1.4748E-08 93.51 By MS/MS By MS/MS 1 1 10851000 4814900 6036400 5829 1731 6489 14638;14639 13386;13387;13388 13387 3272 3 SQSIEQESQEK SDKHDRRRSQSIEQES IEQESQEKQHKNKDET R S Q E K Q 0 0 0 0 0 3 3 0 0 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1291.5892 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 416 426 PRPF38B Pre-mRNA-splicing factor 38B yes no 2 0.00031161 110.31 By MS/MS By MS/MS 4 5 13954000 7311000 6642900 5830 192 6490 14640;14641;14642;14643;14644;14645;14646;14647;14648 13389;13390;13391;13392;13393;13394;13395;13396;13397;13398 13396 345;346 10 SQSLNIR LSVATVTRSQSLNIRT RSQSLNIRTTQLAKAQ R S Q I R T 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 7 0 816.44537 A0A0C4DGF9;O00443 A0A0C4DGF9 336 342 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes no 2 0.0064244 106.6 By MS/MS By MS/MS 1 1 23116000 10853000 12263000 5831 290 6491 14649;14650 13399;13400 13400 515 2 SQSLPGADSLLAK AISAVFGRSQSLPGAD GADSLLAKPIDKQHTD R S Q A K P 2 0 0 1 0 1 0 1 0 0 3 1 0 0 1 3 0 0 0 0 0 0 13 0 1285.6878 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1797 1809 TRRAP Transformation/transcription domain-associated protein yes no 2 0.016563 60.55 By MS/MS By matching 1 1 2521700 1225300 1296400 5832 850 6492 14651;14652 13401 13401 1537 1 SQSLPGADSLLAKPIDK AISAVFGRSQSLPGAD LLAKPIDKQHTDTVVN R S Q D K Q 2 0 0 2 0 1 0 1 0 1 3 2 0 0 2 3 0 0 0 0 0 0 17 1 1738.9465 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1797 1813 TRRAP Transformation/transcription domain-associated protein yes no 3 0.00033837 75.773 By MS/MS By MS/MS 1 1 9207400 4709700 4497600 5833 850 6493 14653;14654 13402;13403;13404 13404 1537 3 SQSLPHSATVTLGGTSDPSTLSSSALSER SDAAPLQRSQSLPHSA SSSALSEREASRLDKF R S Q E R E 2 1 0 1 0 1 1 2 1 0 4 0 0 0 2 9 4 0 0 1 0 0 29 0 2872.405 F8WDP1;A0A0A0MRY0;Q8WUA7 F8WDP1 165 193 TBC1D22A TBC1 domain family member 22A yes no 3 0.00024355 64.16 By MS/MS By MS/MS 1 1 55806000 31174000 24633000 5834 204 6494 14655;14656 13405;13406 13406 370;6278 2 SQSLPNSLDYTQTSDPGR KRTQRHGRSQSLPNSL TQTSDPGRHVMLLRAV R S Q G R H 0 1 1 2 0 2 0 1 0 0 2 0 0 0 2 4 2 0 1 0 0 0 18 0 1964.9076 H0YNE5;H0YLG5;Q96TC7 H0YNE5 44 61 RMDN3 Regulator of microtubule dynamics protein 3 yes no 2 0.00016771 80.975 By MS/MS By MS/MS 1 1 51385000 27420000 23965000 5835 1092 6495 14657;14658 13407;13408 13408 2009 2 SQSLPTTLLSPVR KAGYPLRRSQSLPTTL TTLLSPVRVVSSVNVR R S Q V R V 0 1 0 0 0 1 0 0 0 0 3 0 0 0 2 3 2 0 0 1 0 0 13 0 1397.7878 E9PHV5;P28290;E7EUL7 E9PHV5 737 749 SSFA2 Sperm-specific antigen 2 yes no 2 0.00070835 105.14 By MS/MS By MS/MS 2 2 32410000 16812000 15597000 5836 798 6496;6497 14659;14660;14661;14662 13409;13410;13411;13412 13412 1431;1432 4 SQSMDIDGVSCEK TQSQSLSRSQSMDIDG IDGVSCEKSMSQVDVD R S Q E K S 0 0 0 2 1 1 1 1 0 1 0 1 1 0 0 3 0 0 0 1 0 0 13 0 1454.6017 O95155 O95155 103 115 UBE4B Ubiquitin conjugation factor E4 B yes yes 2 0.00043415 109.79 By MS/MS By MS/MS 1 1 36613000 19716000 16897000 5837 1475 6498 14663;14664 13413;13414 13413 2728 2 SQSPHYFR FIRSKIYRSQSPHYFR SQSPHYFRSGRGEGPG R S Q F R S 0 1 0 0 0 1 0 0 1 0 0 0 0 1 1 2 0 0 1 0 0 0 8 0 1020.4777 Q9UKJ3 Q9UKJ3 1033 1040 GPATCH8 G patch domain-containing protein 8 yes yes 2;3 0.0058066 106.4 By MS/MS By MS/MS 2 1 25566000 13753000 11813000 5838 2831 6499 14665;14666;14667 13415;13416;13417 13417 5830 3 SQSPINCIR TTRFTTRRSQSPINCI QSPINCIRPSVLGPLK R S Q I R P 0 1 1 0 1 1 0 0 0 2 0 0 0 0 1 2 0 0 0 0 0 0 9 0 1073.5288 Q96E09 Q96E09 187 195 FAM122A Protein FAM122A yes yes 2 0.0095114 83.883 By MS/MS 1 0 0 0 5839 2476 6500 14668 13418 13418 4994 1 SQSPINCIRPSVLGPLK TTRFTTRRSQSPINCI PSVLGPLKRKCEMETE R S Q L K R 0 1 1 0 1 1 0 1 0 2 2 1 0 0 3 3 0 0 0 1 0 0 17 1 1865.0193 Q96E09 Q96E09 187 203 FAM122A Protein FAM122A yes yes 3 0.0036712 59.342 By MS/MS By MS/MS 1 1 8759900 5412900 3347000 5840 2476 6501 14669;14670 13419;13420 13419 4994 2 SQSSDTEQQSPTSGGGK RSSNPPARSQSSDTEQ SPTSGGGKVAPAQPSE R S Q G K V 0 0 0 1 0 3 1 3 0 0 0 1 0 0 1 5 2 0 0 0 0 0 17 0 1679.7235 E7EX17;P23588 E7EX17 500 516 EIF4B Eukaryotic translation initiation factor 4B yes no 2 2.6253E-07 114.58 By MS/MS By MS/MS 2 2 35241000 18407000 16835000 5841 750 6502 14671;14672;14673;14674 13421;13422;13423 13423 1365;1366 3 SQSSEGVSSLSSSPSNSLETQSQSLSR GASGVAHRSQSSEGVS TQSQSLSRSQSMDIDG R S Q S R S 0 1 1 0 0 3 2 1 0 0 3 0 0 0 1 13 1 0 0 1 0 0 27 0 2755.2744 O95155 O95155 76 102 UBE4B Ubiquitin conjugation factor E4 B yes yes 3 0.0022011 51.16 By MS/MS 1 16862000 16862000 0 5842 1475 6503 14675 13424 13424 2729 1 SQSSHSYDDSTLPLIDR VNLNNASRSQSSHSYD STLPLIDRNQKSDKKP R S Q D R N 0 1 0 3 0 1 0 0 1 1 2 0 0 0 1 5 1 0 1 0 0 0 17 0 1919.8861 C9JZR2;O60716;H0YC95 C9JZR2 859 875 CTNND1 Catenin delta-1 yes no 2;3 1.5712E-16 132.51 By MS/MS By MS/MS 3 2 28390000 20531000 7859000 5843 624 6504;6505 14676;14677;14678;14679;14680 13425;13426;13427;13428 13427 1137;7336 4 SQSSSLLDMGNMSASDLDVADR VQSSGNRRSQSSSLLD SDLDVADRTKFDKIFE R S Q D R T 2 1 1 4 0 1 0 1 0 0 3 0 2 0 0 6 0 0 0 1 0 0 22 0 2298.0104 Q9NV70 Q9NV70 487 508 EXOC1 Exocyst complex component 1 yes yes 2 0.021174 47.639 By MS/MS 1 2022900 0 2022900 5844 2738 6506 14681 13429 13429 5606 1 SQSTTFNPDDMSEPEFK KLFGKLRRSQSTTFNP DMSEPEFKRGGTRATA R S Q F K R 0 0 1 2 0 1 2 0 0 0 0 1 1 2 2 3 2 0 0 0 0 0 17 0 1958.8204 Q86W92;F5GZP6 Q86W92 599 615 PPFIBP1 Liprin-beta-1 yes no 2 5.6117E-05 84.94 By MS/MS 1 7345700 0 7345700 5845 2247 6507 14682 13430 13430 4500;6943 1 SQSTTFNPDDMSEPEFKR KLFGKLRRSQSTTFNP MSEPEFKRGGTRATAG R S Q K R G 0 1 1 2 0 1 2 0 0 0 0 1 1 2 2 3 2 0 0 0 0 0 18 1 2114.9215 Q86W92;F5GZP6 Q86W92 599 616 PPFIBP1 Liprin-beta-1 yes no 3 0.0006778 70.802 By MS/MS 1 3465500 3465500 0 5846 2247 6508 14683 13431 13431 4500;6943 1 SQSTTSDVPANYK KLRVKPERSQSTTSDV SDVPANYKVIKSSSDA R S Q Y K V 1 0 1 1 0 1 0 0 0 0 0 1 0 0 1 3 2 0 1 1 0 0 13 0 1396.647 Q9NU19 Q9NU19 114 126 TBC1D22B TBC1 domain family member 22B yes yes 2 5.0022E-07 120.7 By MS/MS By MS/MS 1 1 16656000 8956200 7699300 5847 2733 6509 14684;14685 13432;13433 13433 5597 2 SQSWEERGDR GGGREMHRSQSWEERG SWEERGDRRFEKPGRK R S Q D R R 0 2 0 1 0 1 2 1 0 0 0 0 0 0 0 2 0 1 0 0 0 0 10 1 1248.5483 I1E4Y6;Q6Y7W6;E7ESB6 I1E4Y6 158 167 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 0.013871 70.728 By MS/MS By matching 1 1 46202000 19601000 26601000 5848 1194 6510 14686;14687 13434 13434 2172 1 SQTDVYNDSTNLACR QPVLPFSKSQTDVYND DSTNLACRNGHLQSES K S Q C R N 1 1 2 2 1 1 0 0 0 0 1 0 0 0 0 2 2 0 1 1 0 0 15 0 1742.753 Q9UBP0 Q9UBP0 207 221 SPAST Spastin yes yes 2 0.0011647 76.24 By MS/MS By MS/MS 1 1 7299200 4091100 3208100 5849 2800 6511 14688;14689 13435;13436 13436 7927 2 SQTPPGVATPPIPK KSPGSAGRSQTPPGVA VATPPIPKITIQIPKG R S Q P K I 1 0 0 0 0 1 0 1 0 1 0 1 0 0 5 1 2 0 0 1 0 0 14 0 1388.7664 Q15648 Q15648 1049 1062 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 2.8157E-07 126.91 By MS/MS By MS/MS 1 1 66186000 36842000 29345000 5850 1998 6512 14690;14691 13437;13438;13439;13440 13440 6834 4 SQTTSLENGIIPR SYQRRWLRSQTTSLEN LENGIIPRRSTDETFS R S Q P R R 0 1 1 0 0 1 1 1 0 2 1 0 0 0 1 2 2 0 0 0 0 0 13 0 1414.7416 H0Y8F3;D6RFH5;Q9P278 H0Y8F3 138 150 FNIP2 Folliculin-interacting protein 2 yes no 2 0.010161 69.03 By MS/MS By matching 1 1 6583500 3646300 2937200 5851 677 6513 14692;14693 13441 13441 6397 0 SQTTTERDSDTDVEEEELPVENR QRVVLLQRSQTTTERD EELPVENREAVLKDHT R S Q N R E 0 2 1 3 0 1 6 0 0 0 1 0 0 0 1 2 4 0 0 2 0 0 23 1 2678.1791 Q14676 Q14676 445 467 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 3.9006E-14 102.03 By MS/MS By MS/MS 2 2 323150000 200960000 122190000 5852 1951 6514;6515 14694;14695;14696;14697 13442;13443;13444;13445 13444 3779;6819;6820 4 SQTYPDVGLSYEDWDR LSPVTKPRSQTYPDVG LSYEDWDRSTASGFAG R S Q D R S 0 1 0 3 0 1 1 1 0 0 1 0 0 0 1 2 1 1 2 1 0 0 16 0 1929.8381 F5H4N6;Q9Y3R0;H0YFK8;F5H4P8;F5H4Q7 F5H4N6 802 817 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.027003 63.436 By MS/MS 1 1375700 0 1375700 5853 885 6516 14698 13446 13446 1 SQWESPSPTPSYR SGYGSSRRSQWESPSP PSPTPSYRDSERSHRL R S Q Y R D 0 1 0 0 0 1 1 0 0 0 0 0 0 0 3 4 1 1 1 0 0 0 13 0 1520.6896 Q92620 Q92620 228 240 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 2 5.5821E-05 118.08 By MS/MS 1 3459200 3459200 0 5854 2428 6517 14699 13447 13447 4883 1 SQYEVFR ESCLRNMKSQYEVFRS KSQYEVFRSSRLSSDA K S Q F R S 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 7 0 927.44503 Q63HQ0;H0Y8Y4 Q63HQ0 163 169 AP1AR AP-1 complex-associated regulatory protein yes no 2 0.0040245 104.21 By MS/MS By MS/MS 1 1 9671900 5468400 4203600 5855 2127 6518 14700;14701 13448;13449 13448 7754 2 SQYGLPEDAIVYCNFNQLYK RTIIVTTRSQYGLPED CNFNQLYKIDPSTLQM R S Q Y K I 1 0 2 1 1 2 1 1 0 1 2 1 0 1 1 1 0 0 3 1 0 0 20 0 2421.1311 O15294 O15294 833 852 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 3 0.0046849 49.708 By MS/MS 1 8600700 0 8600700 5856 1364 6519 14702 13450 13450 7517 1 SRADLTAEMISAPLGDFR SSVHSKRRSRADLTAE SAPLGDFRHTMHVGRA R S R F R H 3 2 0 2 0 0 1 1 0 1 2 0 1 1 1 2 1 0 0 0 0 0 18 1 1948.9677 Q9H3Q1;J3KRZ9;J3QQS6;J3QR93 Q9H3Q1 18 35 CDC42EP4 Cdc42 effector protein 4 yes no 3 1.6714E-07 110.6 By MS/MS By MS/MS 1 1 12953000 8491700 4461700 5857 2654 6520 14703;14704 13451;13452 13451 5417 2 SRDDLYDQDDSRDFPR AYMPPRSRSRDDLYDQ DDSRDFPRSRDPHYDD R S R P R S 0 3 0 6 0 1 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 0 16 2 1998.8668 S4R3V8;Q86X29 S4R3V8 482 497 LSR Lipolysis-stimulated lipoprotein receptor yes no 3 3.1503E-07 118.52 By MS/MS By MS/MS 1 1 36878000 18842000 18036000 5858 2250 6521 14705;14706 13453;13454 13453 7775 2 SRDSDESGDKTTR SVTTVKARSRDSDESG ESGDKTTRSSSQYIES R S R T R S 0 2 0 3 0 0 1 1 0 0 0 1 0 0 0 3 2 0 0 0 0 0 13 2 1452.6441 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3;H0YD16 A0A0A0MSK5 118 130 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.0012373 90.872 By MS/MS By MS/MS 1 1 9864200 5830700 4033500 5859 218 6522 14707;14708 13455;13456 13455 400 2 SRDSPGYDFSCLVQR RHRAVCGRSRDSPGYD DFSCLVQRVYQEEGLA R S R Q R V 0 2 0 2 1 1 0 1 0 0 1 0 0 1 1 3 0 0 1 1 0 0 15 1 1785.8104 A0A0A0MTG6;Q12770 A0A0A0MTG6 530 544 SCAP Sterol regulatory element-binding protein cleavage-activating protein yes no 3 0.010478 54.402 By MS/MS 1 1333900 0 1333900 5860 245 6523 14709 13457 13457 448;449 1 SRDVLQSYFDLLGELMK CIVDSECKSRDVLQSY DLLGELMKFNVDAFKR K S R M K F 0 1 0 2 0 1 1 1 0 0 4 1 1 1 0 2 0 0 1 1 0 0 17 1 2013.0241 Q8TEL6 Q8TEL6 575 591 TRPC4AP Short transient receptor potential channel 4-associated protein yes yes 3 0.028373 46.68 By MS/MS By matching 1 1 72644000 40088000 32556000 5861 2389 6524 14710;14711 13458 13458 7814 1 SREDLSAQPVQTK SSKRNLRKSREDLSAQ SAQPVQTKFPAYERVV K S R T K F 1 1 0 1 0 2 1 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 13 1 1457.7474 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 605 617 TJP1 Tight junction protein ZO-1 yes no 2 0.0017604 95.57 By MS/MS By matching 1 1 12940000 6477400 6462600 5862 129 6525 14712;14713 13459 13459 232 1 SREDLSAQPVQTKFPAYER SSKRNLRKSREDLSAQ TKFPAYERVVLREAGF K S R E R V 2 2 0 1 0 2 2 0 0 0 1 1 0 1 2 2 1 0 1 1 0 0 19 2 2221.1127 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 605 623 TJP1 Tight junction protein ZO-1 yes no 3 0.004939 58.672 By matching By MS/MS 1 1 9420500 5982900 3437600 5863 129 6526 14714;14715 13460 13460 232 1 SREEDPTLTEEEISAMYSSVNKPGQLVNK RFSSLSYKSREEDPTL KPGQLVNKSGQSLTVP K S R N K S 1 1 2 1 0 1 5 1 0 1 2 2 1 0 2 4 2 0 1 2 0 0 29 2 3250.5664 Q9NWQ8 Q9NWQ8 301 329 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 3 0.00027349 58.294 By MS/MS By matching 1 1 40765000 16137000 24627000 5864 2746 6527 14716;14717 13461 13461 7911 1 SRESLNVDVVK PENMEKRRSRESLNVD SLNVDVVKYESGPDGG R S R V K Y 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 11 1 1244.6725 H0YG16;G3V5R9;G3V3H3;H0YJU9;H0YJL0;H0YJT3;G5E9S8;G3V2E7;F8W6L3;E7EVH7;Q07866;H0YGB8 H0YG16 152 162 KLC1 Kinesin light chain 1 yes no 2 0.0025603 92.939 By MS/MS By MS/MS 1 1 24991000 14107000 10885000 5865 1071 6528 14718;14719 13462;13463 13462 1982 2 SRESSPSHGLLK VRAEATTRSRESSPSH SPSHGLLKLGSGGVVK R S R L K L 0 1 0 0 0 0 1 1 1 0 2 1 0 0 1 4 0 0 0 0 0 0 12 1 1296.6786 Q96JH7 Q96JH7 994 1005 VCPIP1 Deubiquitinating protein VCIP135 yes yes 3 0.021022 51.888 By MS/MS 1 1630400 0 1630400 5866 2507 6529 14720 13464 13464 5045 1 SRFEQFCHLR EPGGWLRRSRFEQFCH FEQFCHLRAIGDGEDE R S R L R A 0 2 0 0 1 1 1 0 1 0 1 0 0 2 0 1 0 0 0 0 0 0 10 1 1378.6564 O14654 O14654 375 384 IRS4 Insulin receptor substrate 4 yes yes 3 0.00083096 96.371 By MS/MS By MS/MS 1 1 5146900 2337600 2809300 5867 1343 6530 14721;14722 13465;13466 13466 2443 2 SRFTPELQPK QKVEPAGRSRFTPELQ FTPELQPKASQSRKRS R S R P K A 0 1 0 0 0 1 1 0 0 0 1 1 0 1 2 1 1 0 0 0 0 0 10 1 1201.6455 Q14676 Q14676 1797 1806 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 0.0036204 85.522 By MS/MS By matching 1 1 7645100 4653200 2991800 5868 1951 6531 14723;14724 13467 13467 3780 1 SRGGTSQVGSPTLLSPAVPSK GSSLSTPRSRGGTSQV LSPAVPSKQKRDRSIL R S R S K Q 1 1 0 0 0 1 0 3 0 0 2 1 0 0 3 5 2 0 0 2 0 0 21 1 2025.0855 Q8IY92 Q8IY92 1061 1081 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 3 0.028566 47.082 By MS/MS 1 0 0 0 5869 2287 6532 14725 13468 13468 4589 1 SRGSTNLFSK ATPLSQTRSRGSTNLF GSTNLFSKLTSKLTRS R S R S K L 0 1 1 0 0 0 0 1 0 0 1 1 0 1 0 3 1 0 0 0 0 0 10 1 1095.5673 A0A0A0MQR8;A0A0A0MSZ1;A0A0A0MT23;J3KNR0;P27448;A0A0A0MST9;H0YIY6;A2SY06 A0A0A0MQR8 582 591 MARK3 MAP/microtubule affinity-regulating kinase 3 yes no 2 8.4596E-06 148.13 By MS/MS By MS/MS 1 1 13201000 6871600 6329600 5870 160 6533 14726;14727 13469;13470 13469 291 2 SRHSSISPVRLPLNSSLGAELSR KKKRSSSRSRHSSISP SLGAELSRKKKERAAA R S R S R K 1 3 1 0 0 0 1 1 1 1 4 0 0 0 2 7 0 0 0 1 0 0 23 2 2462.3354 J3QSD7;Q9NYV4 J3QSD7 378 400 CDK12 Cyclin-dependent kinase 12 yes no 4 0.0074985 46.808 By MS/MS 1 6990900 6990900 0 5871 1260 6534 14728 13471 13471 2283;2284;2285;2286 1 SRINSSGESGDESDEFLQSR NSKKIKERSRINSSGE SDEFLQSRKGQKKNQK R S R S R K 0 2 1 2 0 1 3 2 0 1 1 0 0 1 0 6 0 0 0 0 0 0 20 1 2198.9676 A0A087WUT6;O60841 A0A087WUT6 178 197 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0062911 64.249 By MS/MS 1 0 0 0 5872 49 6535 14729 13472 13472 88;89;90 1 SRLFSDEDDRQINTR MPFRNSKRSRLFSDED DDRQINTRSPKRNQRV R S R T R S 0 3 1 3 0 1 1 0 0 1 1 0 0 1 0 2 1 0 0 0 0 0 15 2 1850.8871 H0Y322;Q5TKA1;B1B047 H0Y322 132 146 LIN9 Protein lin-9 homolog yes no 3 0.018864 52.731 By MS/MS By matching 1 1 28805000 16299000 12506000 5873 1008 6536 14730;14731 13473 13473 1857 1 SRLLSPLSSAR SSKAFQLKSRLLSPLS LSPLSSARLPPEPGLS K S R A R L 1 2 0 0 0 0 0 0 0 0 3 0 0 0 1 4 0 0 0 0 0 0 11 1 1185.683 A0A087WZ13;E9PAU2 A0A087WZ13 563 573 RAVER1 yes no 2 0.029517 61.167 By MS/MS By matching 1 1 12582000 6663400 5918900 5874 104 6537 14732;14733 13474 13474 197 1 SRLSAIEIDIPVVSHTT YSQPYSARSRLSAIEI IPVVSHTT________ R S R T T - 1 1 0 1 0 0 1 0 1 3 1 0 0 0 1 3 2 0 0 2 0 0 17 1 1836.9945 P56749 P56749 228 244 CLDN12 Claudin-12 yes yes 2;3 5.7323E-08 119.51 By MS/MS By MS/MS 2 2 22828000 13492000 9335300 5875 1778 6538 14734;14735;14736;14737 13475;13476;13477;13478 13478 3351;3352 4 SRLSLQENQLPK RSSQGTSRSRLSLQEN LQENQLPK________ R S R P K - 0 1 1 0 0 2 1 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 12 1 1411.7783 Q5RGS4 Q5RGS4 372 383 PLEKHA1 yes yes 2;3 0.0037052 74.966 By MS/MS By matching 2 1 13842000 7295900 6546300 5876 2085 6539 14738;14739;14740 13479;13480 13480 4109 2 SRNSPLLER VLSTSTNRSRNSPLLE RNSPLLERASLGQASG R S R E R A 0 2 1 0 0 0 1 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 9 1 1070.5833 E7ETY4;E9PC69;Q7KZI7 E7ETY4 449 457 MARK2 Serine/threonine-protein kinase MARK2 yes no 2;3 0.0036482 97.957 By MS/MS By MS/MS 1 2 41272000 5360800 35911000 5877 738 6540 14741;14742;14743 13481;13482 13481 1330 2 SRPALSPLGDIDFCPPNPGPDGPR PDLVSSCRSRPALSPL NPGPDGPRRRGRKPTK R S R P R R 1 2 1 3 1 0 0 3 0 1 2 0 0 1 7 2 0 0 0 0 0 0 24 1 2531.2227 Q9ULL5 Q9ULL5 309 332 PRR12 Proline-rich protein 12 yes yes 3 0.00044422 61.903 By MS/MS By MS/MS 1 1 8033300 4450800 3582500 5878 2851 6541 14744;14745 13483;13484;13485 13483 5868;5869 3 SRPEAVSHPLNTVTEDMYTNGSPAPGSPAQVKGQEVR LEHLLQKRSRPEAVSH QVKGQEVRKVRLIQFE R S R V R K 3 2 2 1 0 2 3 3 1 0 1 1 1 0 5 4 3 0 1 4 0 0 37 2 3905.8966 Q00013 Q00013 31 67 MPP1 55 kDa erythrocyte membrane protein yes yes 4 3.1062E-06 61.241 By MS/MS By matching 1 1 8728800 4944900 3784000 5879 1823 6542 14746;14747 13486 13486 3411 1 SRPFTVAASFQSTSVKSPK RSSSLKERSRPFTVAA STSVKSPKTVSPPIRK R S R P K T 2 1 0 0 0 1 0 0 0 0 0 2 0 2 2 5 2 0 0 2 0 0 19 2 2024.0691 F8VS07;F8VQE1;Q9UHB6 F8VS07 285 303 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.00097742 71.696 By MS/MS By MS/MS 1 1 25696000 15738000 9957900 5880 911 6543 14748;14749 13487;13488 13487 1639;1640 2 SRPTSEGSDIESTEPQK TSISKMKRSRPTSEGS IESTEPQKQCSKKKKK R S R Q K Q 0 1 0 1 0 1 3 1 0 1 0 1 0 0 2 4 2 0 0 0 0 0 17 1 1846.8545 Q4G0J3;H0YA82;D6RFF0 Q4G0J3 254 270 LARP7 La-related protein 7 yes no 2;3 1.6517E-07 112.64 By MS/MS By MS/MS 3 3 84495000 39823000 44672000 5881 2046 6544;6545 14750;14751;14752;14753;14754;14755 13489;13490;13491;13492;13493;13494 13490 4004;4005;6858 6 SRPTSEGSDIESTEPQKQCSK TSISKMKRSRPTSEGS EPQKQCSKKKKKRDRV R S R S K K 0 1 0 1 1 2 3 1 0 1 0 2 0 0 2 5 2 0 0 0 0 0 21 2 2350.0707 Q4G0J3;H0YA82;D6RFF0 Q4G0J3 254 274 LARP7 La-related protein 7 yes no 3 2.4556E-09 100.71 By matching By MS/MS 2 2 56347000 29571000 26776000 5882 2046 6546;6547 14756;14757;14758;14759 13495;13496 13495 4004;4005;6858 2 SRPTSFADELAAR EENTRPKRSRPTSFAD FADELAARIKGDAVGR R S R A R I 3 2 0 1 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 0 0 0 13 1 1419.7106 A0A0A0MR88;A0A096LPC5;J3KP36;Q9Y4E1;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2;A0A087WYF6 F8W7U3 196 208 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A no no 2;3 0.0014499 95.755 By MS/MS By MS/MS 3 3 177740000 99941000 77798000 5883 729;158 6548;6549 14760;14761;14762;14763;14764;14765 13497;13498;13499;13500;13501 13497 284;285;6262 5 SRSAMDSPVPASMFAPEPSSPGAAR ________________ PSSPGAARAAAAAARL R S R A R A 5 2 0 1 0 0 1 1 0 0 0 0 2 1 5 6 0 0 0 1 0 0 25 1 2502.1631 O00178;F8WAZ4 O00178 6 30 GTPBP1 GTP-binding protein 1 yes no 3 8.4813E-05 71.78 By MS/MS By MS/MS 3 4 68410000 34596000 33814000 5884 1322 6550;6551 14766;14767;14768;14769;14770;14771;14772 13502;13503;13504;13505;13506;13507 13503 149;150 2384;2385 6 SRSAPPNLWAAQR EPSPFRGRSRSAPPNL PNLWAAQRYGRELRRM R S R Q R Y 3 2 1 0 0 1 0 0 0 0 1 0 0 0 2 2 0 1 0 0 0 0 13 1 1452.7586 Q92934;F5H3B1;F5H1R6 Q92934 97 109 BAD Bcl2-associated agonist of cell death yes no 2;3 0.0033249 84.297 By MS/MS By MS/MS 2 2 9379200 4897100 4482200 5885 2449 6552 14773;14774;14775;14776 13508;13509;13510 13509 4928 3 SRSDIDVNAAAGAK SLPGSLQRSRSDIDVN VNAAAGAKAHHAAGQS R S R A K A 4 1 1 2 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 1 1373.6899 E3W994;J3KR49;O75122;E7ERI8;E7EW49;A0A0U1RQI6;B3KR06;E7ENG2 E3W994 368 381 CLASP2 CLIP-associating protein 2 yes no 2;3 1.4066E-12 133.52 By MS/MS By MS/MS 2 2 440810000 230490000 210320000 5886 690 6553 14777;14778;14779;14780 13511;13512;13513;13514 13512 1226;1227 4 SRSDIDVNAAASAK STTGSLQRSRSDIDVN VNAAASAKSKVSSSSG R S R A K S 4 1 1 2 0 0 0 0 0 1 0 1 0 0 0 3 0 0 0 1 0 0 14 1 1403.7005 Q7Z460;H0Y5T1;F8WA11 Q7Z460 598 611 CLASP1 CLIP-associating protein 1 yes no 2;3 8.589E-08 122.49 By MS/MS By MS/MS 2 2 257590000 147180000 110410000 5887 2217 6554 14781;14782;14783;14784 13515;13516;13517;13518 13515 4428;4429 4 SRSDIDVNAAASAKSK STTGSLQRSRSDIDVN AAASAKSKVSSSSGTT R S R S K V 4 1 1 2 0 0 0 0 0 1 0 2 0 0 0 4 0 0 0 1 0 0 16 2 1618.8275 Q7Z460;H0Y5T1;F8WA11 Q7Z460 598 613 CLASP1 CLIP-associating protein 1 yes no 3 0.00018167 88.071 By MS/MS By MS/MS 1 1 8258600 3373200 4885400 5888 2217 6555 14785;14786 13519;13520 13519 4428;4429 2 SRSDITQVDWR TFKPGHARSRSDITQV DITQVDWRVVLKTTPL R S R W R V 0 2 0 2 0 1 0 0 0 1 0 0 0 0 0 2 1 1 0 1 0 0 11 1 1361.6688 C9J119;Q6ZWE6 C9J119 150 160 PLEKHM3 Pleckstrin homology domain-containing family M member 3 yes no 2 1.1668E-05 122.39 By MS/MS By MS/MS 1 1 11487000 5593600 5893000 5889 553 6556 14787;14788 13521;13522 13521 1023 2 SRSDVDMDAAAEATR RKAENVPRSRSDVDMD DAAAEATRLHQSASSS R S R T R L 4 2 0 3 0 0 1 0 0 0 0 0 1 0 0 2 1 0 0 1 0 0 15 1 1593.7053 O15085 O15085 633 647 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 2;3 0.00025384 85.969 By MS/MS By MS/MS 2 2 18105000 11265000 6839300 5890 1357 6557 14789;14790;14791;14792 13523;13524;13525 13525 2480 2 SRSESETSTMAAK TVGRKSRRSRSESETS ETSTMAAKKNRQSSDK R S R A K K 2 1 0 0 0 0 2 0 0 0 0 1 1 0 0 4 2 0 0 0 0 0 13 1 1383.63 A0A087WVF1;Q5BIX2;Q96B23 A0A087WVF1 143 155 C18orf25;ARKL1 Uncharacterized protein C18orf25 yes no 2 0.011144 64.374 By matching By MS/MS 1 1 4489100 1926900 2562100 5891 62 6558 14793;14794 13526 13526 110 0 SRSFDYNYR SYERRRSRSRSFDYNY RSFDYNYRRSYSPRNR R S R Y R R 0 2 1 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 2 0 0 0 9 1 1206.5418 Q5JRI1;O75494 Q5JRI1 131 139 SRSF10 Serine/arginine-rich splicing factor 10 yes no 3 0.014341 56.205 By MS/MS 1 0 0 0 5892 1441 6559 14795 13527 13527 2663;2664 1 SRSFSGLIK SQVQKRARSRSFSGLI RSFSGLIKRKVLGNQM R S R I K R 0 1 0 0 0 0 0 1 0 1 1 1 0 1 0 3 0 0 0 0 0 0 9 1 993.56073 Q14CB8 Q14CB8 420 428 ARHGAP19 Rho GTPase-activating protein 19 yes yes 2 0.0078094 83.137 By matching By MS/MS 1 1 20809000 11462000 9347100 5893 1965 6560 14796;14797 13528 13528 3832;3833 1 SRSFSGLIKR SQVQKRARSRSFSGLI SFSGLIKRKVLGNQMM R S R K R K 0 2 0 0 0 0 0 1 0 1 1 1 0 1 0 3 0 0 0 0 0 0 10 2 1149.6618 Q14CB8 Q14CB8 420 429 ARHGAP19 Rho GTPase-activating protein 19 yes yes 3 0.0015745 80.905 By MS/MS By MS/MS 1 1 2928000 0 2928000 5894 1965 6561 14798;14799 13529;13530 13529 3832;3833 2 SRSFSSSAEEHS EQLRNHIRSRSFSSSA SSSAEEHS________ R S R H S - 1 1 0 0 0 0 2 0 1 0 0 0 0 1 0 6 0 0 0 0 0 0 12 1 1309.5535 Q96EQ0 Q96EQ0 293 304 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 2 0.002443 92.295 By MS/MS By matching 1 1 8827200 5330600 3496600 5895 2478 6562 14800;14801 13531 13531 4998 1 SRSFTLDDESLK ESRSSSSRSRSFTLDD TLDDESLKYLTHEEKD R S R L K Y 0 1 0 2 0 0 1 0 0 0 2 1 0 1 0 3 1 0 0 0 0 0 12 1 1396.6834 Q86WR7;X6RHS9 Q86WR7 41 52 PROSER2 Proline and serine-rich protein 2 yes no 2;3 1.1708E-08 137.39 By MS/MS By MS/MS 2 2 36147000 20177000 15970000 5896 2248 6563 14802;14803;14804;14805 13532;13533;13534;13535 13532 4504;4505 4 SRSGEGEVSGLMR PHVSGVKRSRSGEGEV GEVSGLMRKVPRVSLE R S R M R K 0 2 0 0 0 0 2 3 0 0 1 0 1 0 0 3 0 0 0 1 0 0 13 1 1363.6514 Q13263;M0R0K9 Q13263 471 483 TRIM28 Transcription intermediary factor 1-beta yes no 2;3 6.9355E-11 141.1 By MS/MS By MS/MS 3 3 698710000 391760000 306950000 5897 1908 6564;6565 14806;14807;14808;14809;14810;14811 13536;13537;13538;13539;13540;13541;13542 13542 251 3654;3655 7 SRSGSIVELIAGGGSSCSPVLSR AKEESGGRSRSGSIVE SCSPVLSRKQKGKVLL R S R S R K 1 2 0 0 1 0 1 4 0 2 2 0 0 0 1 7 0 0 0 2 0 0 23 1 2275.159 P42858 P42858 415 437 HTT Huntingtin yes yes 3 3.1828E-13 97.897 By MS/MS By MS/MS 1 1 18139000 10534000 7605000 5898 1700 6566 14812;14813 13543;13544 13544 3126;3127;3128;3129;3130;3131 2 SRSHSPMSNR TPEYRRRRSRSHSPMS SHSPMSNRRRHTGSRA R S R N R R 0 2 1 0 0 0 0 0 1 0 0 0 1 0 1 4 0 0 0 0 0 0 10 1 1157.536 Q13595 Q13595 96 105 TRA2A Transformer-2 protein homolog alpha yes yes 2 0.018065 53.947 By matching By MS/MS 1 1 12879000 5118400 7760600 5899 1927 6567 14814;14815 13545 13545 3720;3721;3722 1 SRSIDKDR EQERKKERSRSIDKDR SRSIDKDRKKKDKERE R S R D R K 0 2 0 2 0 0 0 0 0 1 0 1 0 0 0 2 0 0 0 0 0 0 8 2 975.50976 Q8TF01 Q8TF01 670 677 PNISR Arginine/serine-rich protein PNISR yes yes 3 0.023179 61.691 By matching By MS/MS 1 1 6946300 2317200 4629100 5900 2393 6568 14816;14817 13546 13546 1 SRSISGASSGLSTSPLSSPR EMAQHGQRSRSISGAS TSPLSSPRVTPHPSPR R S R P R V 1 2 0 0 0 0 0 2 0 1 2 0 0 0 2 9 1 0 0 0 0 0 20 1 1932.9865 Q8IWQ3 Q8IWQ3 410 429 BRSK2 Serine/threonine-protein kinase BRSK2 yes yes 3 0.022276 43.164 By MS/MS By matching 1 1 4319200 2366800 1952400 5901 2270 6569 14818;14819 13547 13547 4558;4559;4560;6948 1 SRSLGGAVGSVASGAR PAAPAAPRSRSLGGAV GSVASGARAAQSPFSI R S R A R A 3 2 0 0 0 0 0 4 0 0 1 0 0 0 0 4 0 0 0 2 0 0 16 1 1430.759 Q8NHG8 Q8NHG8 80 95 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 yes yes 2;3 8.391E-05 99.044 By MS/MS 2 17262000 17262000 0 5902 2360 6570 14820;14821 13548;13549 13548 4734;4735 2 SRSLSASPALGSTK HPIRGRAKSRSLSASP SPALGSTKEFRRTRSL K S R T K E 2 1 0 0 0 0 0 1 0 0 2 1 0 0 1 5 1 0 0 0 0 0 14 1 1360.731 O95544 O95544 44 57 NADK NAD kinase yes yes 2 0.0010661 99.711 By MS/MS By MS/MS 1 1 9647600 4823400 4824300 5903 1491 6571 14822;14823 13550;13551 13550 2765;2766 2 SRSLSNSNPDISGTPTSPDDEVR PASLNLNRSRSLSNSN TSPDDEVRSIIGSKGL R S R V R S 0 2 2 3 0 0 1 1 0 1 1 0 0 0 3 6 2 0 0 1 0 0 23 1 2430.1259 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 894 916 DOCK7 Dedicator of cytokinesis protein 7 yes no 2;3 4.1421E-05 75.156 By MS/MS By MS/MS 4 4 118160000 68343000 49814000 5904 2519 6572;6573;6574 14824;14825;14826;14827;14828;14829;14830;14831 13552;13553;13554;13555;13556 13552 5086;5087;5088;5093 5 SRSPFSTTR APSQTTKRSRSPFSTT RSPFSTTRRSWDDSES R S R T R R 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 3 2 0 0 0 0 0 9 1 1037.5254 Q8NG27;K7EPI8 Q8NG27 68 76 PJA1 E3 ubiquitin-protein ligase Praja-1 yes no 2 0.0099841 78.548 By MS/MS By matching 1 1 11737000 5421600 6315000 5905 2358 6575 14832;14833 13557 13557 4733 1 SRSPGRPPK RGSRSRSRSRSPGRPP RSPGRPPKSARRSASA R S R P K S 0 2 0 0 0 0 0 1 0 0 0 1 0 0 3 2 0 0 0 0 0 0 9 2 980.55156 C9JXK0;Q14739 C9JXK0 84 92 LBR Lamin-B receptor yes no 3 0.0015545 116.84 By MS/MS By MS/MS 2 2 63093000 23728000 39364000 5906 615 6576;6577 14834;14835;14836;14837 13558;13559;13560 13558 1124 3 SRSPGSPVGEGTGSPPKWQIGEQEFEALMR NPEKYKAKSRSPGSPV QEFEALMRMLDNLGYR K S R M R M 1 2 0 0 0 2 4 5 0 1 1 1 1 1 4 4 1 1 0 1 0 0 30 2 3213.5513 P35611;E7EV99;E7ENY0;H0Y9H2;A0A0A0MSR2 P35611 353 382 ADD1 Alpha-adducin yes no 4 0.00076128 52.391 By MS/MS 1 4027600 4027600 0 5907 1673 6578 14838 13561 13561 3085 1 SRSPHEAGFCVYLK PSGQKRSRSRSPHEAG AGFCVYLKGLPFEAEN R S R L K G 1 1 0 0 1 0 1 1 1 0 1 1 0 1 1 2 0 0 1 1 0 0 14 1 1649.7984 Q9NTZ6 Q9NTZ6 422 435 RBM12 RNA-binding protein 12 yes yes 3 0.005836 70.438 By MS/MS By MS/MS 1 1 785070 0 785070 5908 2732 6579 14839;14840 13562;13563 13562 5595;5596 2 SRSPLAIR LLPRKRSRSRSPLAIR SRSPLAIRRRSRSRTP R S R I R R 1 2 0 0 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 1 898.53485 Q9UQ35 Q9UQ35 2044 2051 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.023965 115.91 By MS/MS By matching 1 1 270640000 145610000 125020000 5909 2877 6580 14841;14842 13564 13564 1 SRSPLDKDTYPPSASVVGASVGGHR AVYVSRRRSRSPLDKD GASVGGHRHPPGGGGG R S R H R H 2 2 0 2 0 0 0 3 1 0 1 1 0 0 3 5 1 0 1 3 0 0 25 2 2539.2779 A0A087WWP4;Q96T37 A0A087WWP4 213 237 RBM15 Putative RNA-binding protein 15 yes no 3 0.0081224 49.525 By matching By MS/MS 1 1 11675000 7084800 4590200 5910 81 6581 14843;14844 13565 13565 153;154 1 SRSPLELEPEAK VLRPRNKRSRSPLELE LELEPEAKKLCAKGSD R S R A K K 1 1 0 0 0 0 3 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 12 1 1354.7092 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 24 35 DDB2 DNA damage-binding protein 2 yes no 2;3 9.7224E-20 169.98 By MS/MS By MS/MS 2 2 96252000 46524000 49728000 5911 30 6582 14845;14846;14847;14848 13566;13567;13568 13568 59;60 3 SRSPLELEPEAKK VLRPRNKRSRSPLELE ELEPEAKKLCAKGSDH R S R K K L 1 1 0 0 0 0 3 0 0 0 2 2 0 0 2 2 0 0 0 0 0 0 13 2 1482.8042 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 24 36 DDB2 DNA damage-binding protein 2 yes no 3 0.005346 67.115 By MS/MS By MS/MS 1 1 11346000 6293800 5052600 5912 30 6583 14849;14850 13569;13570;13571 13570 59;60 3 SRSPLLNDRR KPRDKSRRSRSPLLND SPLLNDRRSKQSKSPS R S R R R S 0 3 1 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 10 2 1212.6687 Q13523 Q13523 366 375 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 2 0.0039444 95.417 By MS/MS By matching 1 1 97780000 48164000 49617000 5913 1921 6584 14851;14852 13572 13572 3705;3706 1 SRSPLLVTVVESDPRPQGQPR PFLHPAPRSRSPLLVT PRPQGQPRRGYTASSL R S R P R R 0 3 0 1 0 2 1 1 0 0 2 0 0 0 4 3 1 0 0 3 0 0 21 2 2317.2502 Q5VWN6 Q5VWN6 2035 2055 FAM208B Protein FAM208B yes yes 3 0.019117 47.018 By MS/MS By matching 1 1 12581000 6546100 6035300 5914 2120 6585 14853;14854 13573 13573 4207 1 SRSPNRFDAHDPR HGLYYASRSRSPNRFD RFDAHDPRYEPRAREQ R S R P R Y 1 3 1 2 0 0 0 0 1 0 0 0 0 1 2 2 0 0 0 0 0 0 13 2 1553.7447 Q96T58;F6WRY4 Q96T58 188 200 SPEN Msx2-interacting protein yes no 4 0.012953 49.066 By MS/MS 1 4256400 0 4256400 5915 2545 6586 14855 13574 13574 5148 1 SRSPPPVSK SRSRSRSRSRSPPPVS RSPPPVSKRESKSRSR R S R S K R 0 1 0 0 0 0 0 0 0 0 0 1 0 0 3 3 0 0 0 1 0 0 9 1 953.52943 Q01130 Q01130 189 197 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 2 0.0089868 129.74 By MS/MS By MS/MS 1 1 26778000 11254000 15524000 5916 1828 6587 14856;14857 13575;13576;13577 13577 3421;3422 3 SRSPSSPELNNK LPQTPRPRSRSPSSPE SSPELNNKCLTPQRER R S R N K C 0 1 2 0 0 0 1 0 0 0 1 1 0 0 2 4 0 0 0 0 0 0 12 1 1314.6528 Q9UQ35 Q9UQ35 1497 1508 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0029364 75.02 By MS/MS By MS/MS 2 3 10997000 7910500 3086900 5917 2877 6588;6589 14858;14859;14860;14861;14862 13578;13579;13580;13581 13581 5976;5977;5978;5979 4 SRSPYSPVLR YSSSSWRRSRSPYSPV SPYSPVLRRSGKSRSR R S R L R R 0 2 0 0 0 0 0 0 0 0 1 0 0 0 2 3 0 0 1 1 0 0 10 1 1160.6302 Q14004 Q14004 395 404 CDK13 Cyclin-dependent kinase 13 yes yes 2 0.010091 61.532 By MS/MS By matching 1 1 5353900 2579600 2774300 5918 1936 6590 14863;14864 13582 13582 3736;3737;3738 1 SRSQPCDLDAR RGLRNLPRSRSQPCDL QPCDLDARKTGVKRRH R S R A R K 1 2 0 2 1 1 0 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 11 1 1303.5939 Q9NYF3 Q9NYF3 271 281 FAM53C Protein FAM53C yes yes 2 0.00010936 116.9 By MS/MS By MS/MS 1 1 15855000 6100900 9753800 5919 2757 6591 14865;14866 13583;13584 13583 5640 2 SRSRASPATHR TSPAPWKRSRSRASPA RASPATHRRSRSRTPL R S R H R R 2 3 0 0 0 0 0 0 1 0 0 0 0 0 1 3 1 0 0 0 0 0 11 2 1224.6436 Q9UQ35 Q9UQ35 1864 1874 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.015811 58.433 By matching By MS/MS 1 1 8399000 3059400 5339600 5920 2877 6592 14867;14868 13585 13585 5980;5981;5982 1 SRSRSPHEAGFCVYLK KSPSGQKRSRSRSPHE AGFCVYLKGLPFEAEN R S R L K G 1 2 0 0 1 0 1 1 1 0 1 1 0 1 1 3 0 0 1 1 0 0 16 2 1892.9315 Q9NTZ6 Q9NTZ6 420 435 RBM12 RNA-binding protein 12 yes yes 3 0.0017034 73.386 By MS/MS By MS/MS 2 2 27341000 18325000 9016800 5921 2732 6593;6594 14869;14870;14871;14872 13586;13587;13588 13587 5595;5596 3 SRSRSPLAIR TPLLPRKRSRSRSPLA SRSPLAIRRRSRSRTP R S R I R R 1 3 0 0 0 0 0 0 0 1 1 0 0 0 1 3 0 0 0 0 0 0 10 2 1141.668 Q9UQ35 Q9UQ35 2042 2051 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.025053 53.947 By matching By MS/MS 1 1 27438000 15187000 12251000 5922 2877 6595 14873;14874 13589 13589 1 SRSRTPLISR ASPATHRRSRSRTPLI SRTPLISRRRSRSRTS R S R S R R 0 3 0 0 0 0 0 0 0 1 1 0 0 0 1 3 1 0 0 0 0 0 10 2 1171.6786 Q9UQ35 Q9UQ35 1876 1885 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0061932 73.415 By MS/MS By MS/MS 1 1 65778000 31504000 34274000 5923 2877 6596 14875;14876 13590;13591 13591 5983;5984;7110 2 SRSRTPLLPR TPPAIRRRSRSRTPLL SRTPLLPRKRSRSRSP R S R P R K 0 3 0 0 0 0 0 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 10 2 1181.6993 Q9UQ35 Q9UQ35 2030 2039 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0090756 69.229 By matching By MS/MS 1 1 32334000 18507000 13827000 5924 2877 6597 14877;14878 13592 13592 5985;5986;7111 1 SRSSDIVSSVR SYPERLVRSRSSDIVS SDIVSSVRRPMSDPSW R S R V R R 0 2 0 1 0 0 0 0 0 1 0 0 0 0 0 5 0 0 0 2 0 0 11 1 1191.6208 Q14C86;H0Y7I9;C9IZ08;H0Y4E7;F8W9S7 Q14C86 900 910 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2;3 7.5257E-07 153.14 By MS/MS By MS/MS 2 2 469150000 228510000 240640000 5925 1964 6598 14879;14880;14881;14882 13593;13594;13595;13596 13596 3825;3826;3827 4 SRSVSPCSNVESR TSRTTPRRSRSVSPCS PCSNVESRLLPRYSHS R S R S R L 0 2 1 0 1 0 1 0 0 0 0 0 0 0 1 5 0 0 0 2 0 0 13 1 1463.6787 Q9UQ35;I3L182;I3L4D8 Q9UQ35 950 962 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.017531 78.249 By MS/MS By matching 1 1 15005000 7504800 7500500 5926 2877 6599 14883;14884 13597 13597 5987;5988 1 SRSWEDSPER RLNSHGGRSRSWEDSP SWEDSPERGRPHERAR R S R E R G 0 2 0 1 0 0 2 0 0 0 0 0 0 0 1 3 0 1 0 0 0 0 10 1 1247.5531 A0A1B0GTW1;Q9UDY2;B1AN86 A0A1B0GTW1 227 236 TJP2 Tight junction protein ZO-2 yes no 2 0.012722 86.756 By matching By MS/MS 1 1 7130200 3135600 3994600 5927 368 6600 14885;14886 13598 13598 691;692 1 SRSWPASPR PLVVRAVRSRSWPASP RSWPASPRGPQPPRIR R S R P R G 1 2 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 1 0 0 0 0 9 1 1042.5308 Q86YD1 Q86YD1 34 42 PTOV1 Prostate tumor-overexpressed gene 1 protein yes yes 2 0.0057964 88.155 By MS/MS By matching 1 1 20214000 10221000 9992700 5928 2254 6601 14887;14888 13599 13599 4520 1 SRSYTYDSYYSRSR SSYDPHSRSRSYTYDS DSYYSRSRSRSRSQRS R S R S R S 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 5 1 0 4 0 0 0 14 2 1789.802 A0A087WYW3;P30414 A0A087WYW3 1099 1112 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.018039 51.235 By MS/MS By MS/MS 1 1 0 0 0 5929 101 6602 14889;14890 13600;13601 13600 188;189;190;7168;7169 2 SRTASGSSVTSLDGTR ASMTRLMRSRTASGSS VTSLDGTRSRSHTSEG R S R T R S 1 2 0 1 0 0 0 2 0 0 1 0 0 0 0 5 3 0 0 1 0 0 16 1 1580.7754 E5RJY1;E7ESM1;Q92597 E5RJY1 35 50 NDRG1 Protein NDRG1 yes no 2;3 0.00013901 86.959 By MS/MS By MS/MS 4 4 91680000 55205000 36476000 5930 702 6603;6604 14891;14892;14893;14894;14895;14896;14897;14898 13602;13603;13604;13605;13606;13607 13602 1244;1245;1246;1247;6410 6 SRTASLTSAASVDGNR SCMTRLSRSRTASLTS AASVDGNRSRSRTLSQ R S R N R S 3 2 1 1 0 0 0 1 0 0 1 0 0 0 0 4 2 0 0 1 0 0 16 1 1591.7914 G3V578;H0YJT9;A0A0A0MS87;Q9UN36 G3V578 241 256 NDRG2 Protein NDRG2 yes no 2;3 3.3309E-28 157.42 By MS/MS By MS/MS 3 3 50534000 29666000 20868000 5931 210 6605;6606 14899;14900;14901;14902;14903;14904 13608;13609;13610;13611;13612;13613 13612 382;383;6280;6281 6 SRTGSESSQTGTSTTSSR EETQERERSRTGSESS GTSTTSSRSKSDQDAR R S R S R S 0 2 0 0 0 1 1 2 0 0 0 0 0 0 0 7 5 0 0 0 0 0 18 1 1815.8195 E7EX17;P23588 E7EX17 418 435 EIF4B Eukaryotic translation initiation factor 4B yes no 2;3 2.1135E-19 130.4 By MS/MS By MS/MS 3 3 162510000 76520000 85991000 5932 750 6607;6608 14905;14906;14907;14908;14909;14910 13614;13615;13616;13617 13615 1367;6432 4 SRTHSTSSSLGSGESPFSR ASMTRLARSRTHSTSS SGESPFSRSVTSNQSD R S R S R S 0 2 0 0 0 0 1 2 1 0 1 0 0 1 1 8 2 0 0 0 0 0 19 1 1965.914 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 232 250 NDRG3 Protein NDRG3 yes no 3 0.00074473 70.837 By MS/MS By MS/MS 2 2 53846000 30864000 22982000 5933 947 6609;6610 14911;14912;14913;14914 13618;13619;13620 13618 1716;1717;6480 3 SRTLSQSSESGTLSSGPPGHTMEVSC SVDGNRSRSRTLSQSS GHTMEVSC________ R S R S C - 0 1 0 0 1 1 2 3 1 0 2 0 1 0 2 8 3 0 0 1 0 0 26 1 2678.1912 G3V578;H0YJT9;A0A0A0MS87;Q9UN36 G3V578 259 284 NDRG2 Protein NDRG2 yes no 3 0.030035 43.64 By MS/MS 1 0 0 0 5934 210 6611 14915 13621 13621 1 SRTPLLPR PAIRRRSRSRTPLLPR SRTPLLPRKRSRSRSP R S R P R K 0 2 0 0 0 0 0 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 8 1 938.56615 Q9UQ35 Q9UQ35 2032 2039 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.029611 84.687 By MS/MS By matching 1 1 204420000 103230000 101200000 5935 2877 6612 14916;14917 13622 13622 5986;7111 1 SRTPPAIR PVTRRRSRSRTPPAIR SRTPPAIRRRSRSRTP R S R I R R 1 2 0 0 0 0 0 0 0 1 0 0 0 0 2 1 1 0 0 0 0 0 8 1 896.5192 Q9UQ35 Q9UQ35 2020 2027 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.018562 96.171 By MS/MS By MS/MS 1 1 130750000 66025000 64726000 5936 2877 6613 14918;14919 13623;13624 13623 5989 2 SRTPPSAPSQSR PPLLDRARSRTPPSAP PSAPSQSRMTSERAPS R S R S R M 1 2 0 0 0 1 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 12 1 1269.6426 Q9UQ35;I3L3Q8 Q9UQ35 2407 2418 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 0.00063253 108.43 By MS/MS By MS/MS 4 3 81568000 49359000 32209000 5937 2877 6614;6615 14920;14921;14922;14923;14924;14925;14926 13625;13626;13627;13628;13629;13630 13626 5990;5991;7112 6 SRTPPVTR PVSRRRSRSRTPPVTR SRTPPVTRRRSRSRTP R S R T R R 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 1 0 0 8 1 912.51411 Q9UQ35 Q9UQ35 1925 1932 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0081866 66.962 By MS/MS By MS/MS 3 3 7436700 3186600 4250000 5938 2877 6616 14927;14928;14929;14930;14931;14932 13631;13632;13633;13634 13634 5992;7113 4 SRTPSASNDDQQE EQLRSQIRSRTPSASN ASNDDQQE________ R S R Q E - 1 1 1 2 0 2 1 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 13 1 1433.6019 O43765 O43765 301 313 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 2 7.5206E-98 225.33 By MS/MS By MS/MS 1 1 97806000 43930000 53876000 5939 1393 6617 14933;14934 13635;13636;13637;13638;13639;13640;13641;13642;13643;13644 13638 2557;2558 10 SRTSVQTEDDQLIAGQSAR ETEDFDVRSRTSVQTE LIAGQSARAIMAQLPQ R S R A R A 2 2 0 2 0 3 1 1 0 1 1 0 0 0 0 3 2 0 0 1 0 0 19 1 2061.0087 G3XAM7;P35221;A0A0A0MTJ6;A0A0A0MRI5;P26232 G3XAM7 652 670 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 yes no 2;3 6.7438E-82 191.9 By MS/MS By MS/MS 3 3 296490000 174970000 121520000 5940 986 6618;6619 14935;14936;14937;14938;14939;14940 13645;13646;13647;13648;13649;13650 13646 1795;1796;1797;6491;6492 6 SRTTPLGGLGPGEAR PTPPGPPRSRTTPLGG GLGPGEARDYSPSRNP R S R A R D 1 2 0 0 0 0 1 4 0 0 2 0 0 0 2 1 2 0 0 0 0 0 15 1 1467.7794 Q9HCM7 Q9HCM7 1017 1031 FBRSL1 Fibrosin-1-like protein yes yes 3 0.012319 54.74 By matching By MS/MS 1 1 4145400 2091600 2053700 5941 2696 6620 14941;14942 13651 13651 1 SRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSALR DLAAGVGRSRVPVRPP QNTNSALRYKGKGTGK R S R L R Y 1 3 2 8 0 3 4 0 0 0 1 0 0 0 3 3 1 0 2 3 0 0 34 2 3995.7165 F8W6N3;Q92560 F8W6N3 366 399 BAP1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase BAP1 yes no 4 1.7164E-20 92.449 By MS/MS By MS/MS 1 1 17241000 7807300 9434000 5942 934 6621 14943;14944 13652;13653 13653 1680 2 SRVSVSPGR QQSNRTRKSRVSVSPG RVSVSPGRTSGKVTKH K S R G R T 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 3 0 0 0 2 0 0 9 1 943.51993 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 421 429 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2 0.016303 92.112 By MS/MS By MS/MS 1 1 79496000 41796000 37700000 5943 442;1311 6622 14945;14946 13654;13655;13656 13655 861;862;2355;2356 3 SRVSVSPGRTSVTK QQSNRTRKSRVSVSPG PGRTSVTKHKGTEKRE K S R T K H 0 2 0 0 0 0 0 1 0 0 0 1 0 0 1 4 2 0 0 3 0 0 14 2 1459.8107 M0R088 M0R088 387 400 SRRM1 yes yes 2 0.029808 60.158 By matching By MS/MS 1 1 18610000 11405000 7205400 5944 1311 6623 14947;14948 13657 13657 2355;2356 1 SRYSGDGIMMSTYLTQRHR CWVYKDRKSRYSGDGI TYLTQRHRLGFNQKLK K S R H R L 0 3 0 1 0 1 0 2 1 1 1 0 2 0 0 3 2 0 2 0 0 0 19 2 2258.0685 G3V5V5 G3V5V5 137 155 KLHDC1 yes yes 3 0.025384 41.86 By matching By MS/MS 1 1 4863400 3169200 1694200 5945 983 6624 14949;14950 13658 13658 7424 0 SSADKIGEVSSPKASSK KESQQHSKSSADKIGE SSPKASSKLAIMKRKE K S S S K L 2 0 0 1 0 0 1 1 0 1 0 3 0 0 1 6 0 0 0 1 0 0 17 2 1676.8581 P35251 P35251 302 318 RFC1 Replication factor C subunit 1 yes yes 3 0.010669 54.875 By MS/MS By MS/MS 1 1 7288900 3755600 3533300 5946 1669 6625 14951;14952 13659;13660 13659 3074 2 SSADTEFSDECTTAER WRSNNSRKSSADTEFS DECTTAERVLMKSPSP K S S E R V 2 1 0 2 1 0 3 0 0 0 0 0 0 1 0 3 3 0 0 0 0 0 16 0 1804.7058 Q9H6S0 Q9H6S0 1201 1216 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.019944 53.828 By MS/MS 1 1823200 0 1823200 5947 2669 6626 14953 13661 13661 5446;5447 1 SSARLSQSSQDSSPVR RRSARVTRSSARLSQS SQDSSPVRNLQSFGTE R S S V R N 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 7 0 0 0 1 0 0 16 1 1690.8234 O95251 O95251 45 60 KAT7 Histone acetyltransferase KAT7 yes yes 3 0.0073549 55.972 By MS/MS By MS/MS 1 1 4161500 2408300 1753200 5948 1482 6627 14954;14955 13662;13663 13662 2740;2741;2742 2 SSATSGDIWPGLSAYDNSPR ESIDEFNKSSATSGDI SAYDNSPRSPHSPSPI K S S P R S 2 1 1 2 0 0 0 2 0 1 1 0 0 0 2 5 1 1 1 0 0 0 20 0 2079.9498 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 205 224 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.00074127 73.36 By MS/MS By MS/MS 1 1 9430200 4913500 4516700 5949 2759 6628 14956;14957 13664;13665 13664 5653;5654 2 SSDEENGPPSSPDLDR KEKRTEARSSDEENGP PSSPDLDRIAASMRAL R S S D R I 0 1 1 3 0 0 2 1 0 0 1 0 0 0 3 4 0 0 0 0 0 0 16 0 1700.7126 Q96B36 Q96B36 202 217 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.00020762 91.401 By MS/MS By MS/MS 2 2 17472000 8418000 9054300 5950 2460 6629;6630 14958;14959;14960;14961 13666;13667;13668;13669;13670 13667 4956;4957;4958 5 SSDGSLSHEEDLAK TPSTSGKRSSDGSLSH SHEEDLAKVIELQEII R S S A K V 1 0 0 2 0 0 2 1 1 0 2 1 0 0 0 4 0 0 0 0 0 0 14 0 1473.6583 Q13136;H0YEF9;E9PJZ7 Q13136 238 251 PPFIA1 Liprin-alpha-1 yes no 2 0.024977 51.03 By MS/MS By matching 1 1 10894000 6116200 4777800 5951 1899 6631 14962;14963 13671 13671 3625 1 SSDIVSSVR PERLVRSRSSDIVSSV SDIVSSVRRPMSDPSW R S S V R R 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 2 0 0 9 0 948.48762 Q14C86;H0Y7I9;C9IZ08;H0Y4E7;F8W9S7 Q14C86 902 910 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2 0.0043868 105.4 By MS/MS By MS/MS 1 1 55123000 28896000 26227000 5952 1964 6632 14964;14965 13672;13673 13673 3826;3827 2 SSDQPLTVPVSPK KYQGLEIKSSDQPLTV LTVPVSPKFSTRFHC_ K S S P K F 0 0 0 1 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 0 1353.714 Q9ULW0 Q9ULW0 728 740 TPX2 Targeting protein for Xklp2 yes yes 2 6.4771E-50 192.32 By MS/MS By MS/MS 1 1 319380000 178690000 140690000 5953 2854 6633 14966;14967 13674;13675;13676;13677 13675 5878 4 SSDQPLTVPVSPKFSTR KYQGLEIKSSDQPLTV VSPKFSTRFHC_____ K S S T R F 0 1 0 1 0 1 0 0 0 0 1 1 0 1 3 4 2 0 0 2 0 0 17 1 1844.9632 Q9ULW0 Q9ULW0 728 744 TPX2 Targeting protein for Xklp2 yes yes 2;3 0.0036686 67.645 By MS/MS By MS/MS 2 2 14931000 7746400 7184900 5954 2854 6634 14968;14969;14970;14971 13678;13679;13680 13679 5878;5880;7098 3 SSEDLAGPLPSSVSSSSTTSSKPK LAVLGPSRSSEDLAGP STTSSKPKLKKRFSLR R S S P K L 1 0 0 1 0 0 1 1 0 0 2 2 0 0 3 10 2 0 0 1 0 0 24 1 2335.1391 Q9NRF2 Q9NRF2 125 148 SH2B1 SH2B adapter protein 1 yes yes 3 4.8563E-05 73.936 By MS/MS By MS/MS 1 1 8402000 4081200 4320800 5955 2720 6635 14972;14973 13681;13682 13681 5558;5559 2 SSELLVR KIRDVLRRSSELLVRK RSSELLVRKLQGTEPR R S S V R K 0 1 0 0 0 0 1 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 7 0 802.45487 Q9NSK0 Q9NSK0 565 571 KLC4 Kinesin light chain 4 yes yes 2 0.0045487 114.5 By MS/MS By MS/MS 1 1 2667700 1383200 1284500 5956 2729 6636 14974;14975 13683;13684 13683 5579 2 SSENVLDEEGGRSPR HFLSKHFRSSENVLDE EEGGRSPRLRPRSRSL R S S P R L 0 2 1 1 0 0 3 2 0 0 1 0 0 0 1 3 0 0 0 1 0 0 15 1 1630.7547 O60307 O60307 134 148 MAST3 Microtubule-associated serine/threonine-protein kinase 3 yes yes 2 0.0098752 62.861 By MS/MS By MS/MS 1 1 13812000 6539100 7272600 5957 1404 6637 14976;14977 13685;13686 13686 2582 2 SSEPVKETVQTTQSPTPVEK NTEWETVKSSEPVKET QSPTPVEKETVVTTQA K S S E K E 0 0 0 0 0 2 3 0 0 0 0 2 0 0 3 3 4 0 0 3 0 0 20 1 2171.0958 A0A0A0MT33;Q9UPN6 A0A0A0MT33 682 701 SCAF8 Protein SCAF8 yes no 3 1.2964E-18 122.6 By MS/MS By MS/MS 1 1 26494000 12968000 13526000 5958 235 6638 14978;14979 13687;13688 13687 424 2 SSEPVQHEESIRKPSPEPR PLVSSITRSSEPVQHE RKPSPEPRAQMRRAAS R S S P R A 0 2 0 0 0 1 4 0 1 1 0 1 0 0 4 4 0 0 0 1 0 0 19 2 2188.0873 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1011 1029 TJP2 Tight junction protein ZO-2 yes no 4 0.014127 42.708 By matching By MS/MS 1 1 14404000 7495600 6908400 5959 368 6639 14980;14981 13689 13689 693 1 SSEQSRSVNIASK NFRVIATKSSEQSRSV RSVNIASKLSLQESES K S S S K L 1 1 1 0 0 1 1 0 0 1 0 1 0 0 0 5 0 0 0 1 0 0 13 1 1391.7005 Q9NRL2 Q9NRL2 1384 1396 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 2 0.016567 61.213 By MS/MS 1 0 0 0 5960 2721 6640 14982 13690 13690 1 SSESSCGVDGDYEDAELNPR SRPPYRGRSSESSCGV EDAELNPRFLKDNLID R S S P R F 1 1 1 3 1 0 3 2 0 0 1 0 0 0 1 4 0 0 1 1 0 0 20 0 2185.8706 P11274;A9UF01 P11274 235 254 BCR;BCR/ABL fusion Breakpoint cluster region protein yes no 2 1.7951E-25 130.66 By MS/MS By MS/MS 1 1 19971000 12173000 7798700 5961 1562 6641 14983;14984 13691;13692;13693 13692 2864;7561 3 SSFFSDRGSGSR SRSDSRGKSSFFSDRG SDRGSGSRGRFDDRGR K S S S R G 0 2 0 1 0 0 0 2 0 0 0 0 0 2 0 5 0 0 0 0 0 0 12 1 1288.5796 A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O00571;A0A087WX09;B4DLA0;A0A0J9YYH6 A0A0D9SFB3 82 93 DDX3X ATP-dependent RNA helicase DDX3X yes no 3 0.019355 53.013 By MS/MS By matching 2 1 70509000 50047000 20462000 5962 311 6642 14985;14986;14987 13694 13694 565 1 SSFLSSPER CREELMVKSSFLSSPE SFLSSPERAVNPHLPR K S S E R A 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 4 0 0 0 0 0 0 9 0 1008.4876 Q4AC94 Q4AC94 2127 2135 C2CD3 C2 domain-containing protein 3 yes yes 2 0.0045408 100.93 By MS/MS By MS/MS 1 1 3100800 1554100 1546700 5963 2044 6643 14988;14989 13695;13696 13695 3998 2 SSFSHYSGLK DRHSGSDRSSFSHYSG FSHYSGLKHEDKRGGS R S S L K H 0 0 0 0 0 0 0 1 1 0 1 1 0 1 0 4 0 0 1 0 0 0 10 0 1111.5298 Q8NC51 Q8NC51 202 211 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3 8.3102E-05 114.86 By MS/MS By MS/MS 3 3 47822000 25860000 21963000 5964 2335 6644 14990;14991;14992;14993;14994;14995 13697;13698;13699;13700;13701 13697 4678;4679;7805 5 SSFYSGGWQEGSSSPR ANSNGVERSSFYSGGW QEGSSSPRSHLSPEQG R S S P R S 0 1 0 0 0 1 1 3 0 0 0 0 0 1 1 6 0 1 1 0 0 0 16 0 1717.7332 D3DPQ1;Q96BR9 D3DPQ1 148 163 ZBTB8A Zinc finger and BTB domain-containing protein 8A yes no 2 0.00018091 98.182 By MS/MS By MS/MS 1 1 11710000 6409000 5300600 5965 637 6645 14996;14997 13702;13703 13702 1155;1156;1157 2 SSFYVNGLTLGGQK GVLVGKDRSSFYVNGL GLTLGGQKCSVIRDSL R S S Q K C 0 0 1 0 0 1 0 3 0 0 2 1 0 1 0 2 1 0 1 1 0 0 14 0 1469.7514 P07737;K7EJ44;I3L3D5 P07737 57 70 PFN1 Profilin-1 yes no 2 0.003402 81.017 By MS/MS By MS/MS 1 1 2023200 1299900 723300 5966 1538 6646 14998;14999 13704;13705;13706 13705 3 SSGDPEQIKEDSLSEESADAR ESEGCYCRSSGDPEQI SEESADARSFEMTEFN R S S A R S 2 1 0 3 0 1 4 1 0 1 1 1 0 0 1 5 0 0 0 0 0 0 21 1 2248.9931 Q9BVS4 Q9BVS4 369 389 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 3 2.0283E-06 84.499 By MS/MS By MS/MS 1 1 9363300 5187500 4175800 5967 2587 6647 15000;15001 13707;13708 13708 5232 1 SSGEIVYCGQVFEKSPLR YKLKKMKKSSGEIVYC VFEKSPLRVKNFGIWL K S S L R V 0 1 0 0 1 1 2 2 0 1 1 1 0 1 1 3 0 0 1 2 0 0 18 1 2055.0095 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 18 35 RPL18A 60S ribosomal protein L18a yes no 3 0.00057438 72.99 By MS/MS By MS/MS 1 1 11033000 5007100 6026000 5968 1314 6648 15002;15003 13709;13710 13709 2361 2 SSGEIVYCGQVFEKSPLRVK YKLKKMKKSSGEIVYC EKSPLRVKNFGIWLRY K S S V K N 0 1 0 0 1 1 2 2 0 1 1 2 0 1 1 3 0 0 1 3 0 0 20 2 2282.1729 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 18 37 RPL18A 60S ribosomal protein L18a yes no 3 0.0016538 66.906 By MS/MS By matching 1 1 7127600 4402900 2724600 5969 1314 6649 15004;15005 13711 13711 2361 1 SSGFISELPSEEGK PSLRQEKRSSGFISEL ELPSEEGKKLEHFTKL R S S G K K 0 0 0 0 0 0 3 2 0 1 1 1 0 1 1 4 0 0 0 0 0 0 14 0 1465.6937 Q5VZK9;A0A0U1RQQ1 Q5VZK9 967 980 LRRC16A Leucine-rich repeat-containing protein 16A yes no 2 0.0044425 68.751 By MS/MS By matching 1 1 10762000 5574200 5187900 5970 2124 6650 15006;15007 13712 13712 4220;4221 1 SSGHSSSELSPDAVEK DMKEQSTRSSGHSSSE LSPDAVEKAGMSSNQS R S S E K A 1 0 0 1 0 0 2 1 1 0 1 1 0 0 1 6 0 0 0 1 0 0 16 0 1615.7326 Q9UQ35 Q9UQ35 1378 1393 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.00014095 91.932 By matching By MS/MS 2 2 27243000 12726000 14517000 5971 2877 6651;6652 15008;15009;15010;15011 13713;13714 13714 5993;5994;5995 2 SSGLRNSATGYR LGMSFMNRSSGLRNSA RNSATGYRQSPDGACS R S S Y R Q 1 2 1 0 0 0 0 2 0 0 1 0 0 0 0 3 1 0 1 0 0 0 12 1 1267.6269 Q9UIQ6 Q9UIQ6 85 96 LNPEP Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form yes yes 2 0.013361 67.118 By MS/MS 1 6090300 0 6090300 5972 2818 6653 15012 13715 13715 5794;5795 1 SSGPAPQSLLSAWR VHSTPVRRSSGPAPQS QSLLSAWRVSALPTPA R S S W R V 2 1 0 0 0 1 0 1 0 0 2 0 0 0 2 4 0 1 0 0 0 0 14 0 1455.747 Q9NYZ3 Q9NYZ3 494 507 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.0030907 86.498 By MS/MS By MS/MS 1 1 5981800 0 5981800 5973 2762 6654 15013;15014 13716;13717 13717 5675;5676 2 SSGPTSLFAVTVAPPGAR AAKEAAGKSSGPTSLF TVAPPGARQGQQQAGG K S S A R Q 3 1 0 0 0 0 0 2 0 0 1 0 0 1 3 3 2 0 0 2 0 0 18 0 1713.905 Q00839 Q00839 187 204 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3 1.6478E-07 87.669 By MS/MS 1 1531500 1531500 0 5974 1827 6655 15015 13718 13718 1 SSGPYGGGGQYFAKPR KGGNFGGRSSGPYGGG GQYFAKPRNQGGYGGS R S S P R N 1 1 0 0 0 1 0 5 0 0 0 1 0 1 2 2 0 0 2 0 0 0 16 1 1627.7743 F8W6I7;P09651;H0YH80 F8W6I7 272 287 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 2 0.0020197 74.853 By MS/MS By matching 1 1 11333000 5129900 6203500 5975 933 6656 15016;15017 13719 13719 1676;1677 1 SSGRSGSMDPSGAHPSVR DPAARMSRSSGRSGSM SGAHPSVRQTPSRQPP R S S V R Q 1 2 0 1 0 0 0 3 1 0 0 0 1 0 2 6 0 0 0 1 0 0 18 1 1770.8067 Q07666 Q07666 14 31 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 2;3 5.0536E-06 94.456 By MS/MS By MS/MS 3 2 218530000 122210000 96320000 5976 1862 6657;6658 15018;15019;15020;15021;15022 13720;13721;13722;13723;13724 13724 240 3504;3505;3506;3507 5 SSGSEGSSPNWLQALK TLPPKPEKSSGSEGSS PNWLQALKLKKKKV__ K S S L K L 1 0 1 0 0 1 1 2 0 0 2 1 0 0 1 5 0 1 0 0 0 0 16 0 1646.79 Q9C0C2 Q9C0C2 1708 1723 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 4.0722E-06 112.62 By MS/MS By MS/MS 2 2 7015200 3380600 3634500 5977 2615 6659 15023;15024;15025;15026 13725;13726;13727 13725 5304;5305;5306 3 SSGSETEQVVDFSDR KYPLRQTRSSGSETEQ QVVDFSDRETKNTADH R S S D R E 0 1 0 2 0 1 2 1 0 0 0 0 0 1 0 4 1 0 0 2 0 0 15 0 1641.7118 O95251 O95251 99 113 KAT7 Histone acetyltransferase KAT7 yes yes 2 0.0019455 76.82 By MS/MS By MS/MS 3 2 11624000 6554200 5069700 5978 1482 6660;6661 15027;15028;15029;15030;15031 13728;13729;13730;13731;13732 13731 2743;2744 5 SSGSETEQVVDFSDRETK KYPLRQTRSSGSETEQ DFSDRETKNTADHDES R S S T K N 0 1 0 2 0 1 3 1 0 0 0 1 0 1 0 4 2 0 0 2 0 0 18 1 1999.8971 O95251 O95251 99 116 KAT7 Histone acetyltransferase KAT7 yes yes 2;3 0.00014095 77.469 By MS/MS By MS/MS 2 2 13509000 6472900 7035900 5979 1482 6662 15032;15033;15034;15035 13733;13734;13735;13736 13734 2743;2744 4 SSGSGSSVADERVDYVVVDQQK STPPRKQKSSGSGSSV YVVVDQQKTLALKSTR K S S Q K T 1 1 0 3 0 2 1 2 0 0 0 1 0 0 0 5 0 0 1 5 0 0 22 1 2311.0928 B7Z3B9;Q13480 B7Z3B9 542 563 GAB1 GRB2-associated-binding protein 1 yes no 3 2.0416E-35 142.3 By MS/MS 1 25139000 25139000 0 5980 513 6663 15036 13737 13737 7301 1 SSGSPAAGDPESSLCVEYEQEPVPAR HVPSLKQRSSGSPAAG EQEPVPAR________ R S S A R - 3 1 0 1 1 1 4 2 0 0 1 0 0 0 4 5 0 0 1 2 0 0 26 0 2718.2079 X6RBZ7;A0A0C4DGC7;F6WH68;Q9NZ71 X6RBZ7 196 221 RTEL1;RTEL1-TNFRSF6B Regulator of telomere elongation helicase 1 yes no 3 0.02301 45.784 By MS/MS 1 0 0 0 5981 289 6664 15037 13738 13738 7222 1 SSGSPEPSPAIAK CPEAAPARSSGSPEPS EPSPAIAKAKEFVADI R S S A K A 2 0 0 0 0 0 1 1 0 1 0 1 0 0 3 4 0 0 0 0 0 0 13 0 1226.6143 K7ELE9;Q66K64 K7ELE9 84 96 DCAF15 DDB1- and CUL4-associated factor 15 yes no 2 0.019159 73.881 By matching By MS/MS 1 1 17029000 13072000 3956800 5982 1278 6665 15038;15039 13739 13739 2312 0 SSGSPKFAMK SPHGLPARSSGSPKFA GSPKFAMKTRQAFYLH R S S M K T 1 0 0 0 0 0 0 1 0 0 0 2 1 1 1 3 0 0 0 0 0 0 10 1 1038.5168 H0Y4T7;E7ESY4;Q13330 H0Y4T7 249 258 MTA1 Metastasis-associated protein MTA1 yes no 2 0.0024467 93.649 By MS/MS By MS/MS 2 1 26968000 14941000 12027000 5983 735 6666;6667 15040;15041;15042 13740;13741;13742 13741 1318 3 SSGSPYGGGYGSGGGSGGYGSR KGGSFGGRSSGSPYGG GSGGYGSRRF______ R S S S R R 0 1 0 0 0 0 0 11 0 0 0 0 0 0 1 6 0 0 3 0 0 0 22 0 1909.7827 H7C1J8;P51991 H7C1J8 92 113 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 2;3 1.8636E-10 102.9 By MS/MS By MS/MS 2 2 1230700000 635910000 594830000 5984 1171 6668 15043;15044;15045;15046 13743;13744;13745;13746;13747 13743 2127;2128;2129;7467 4 SSGSPYGGGYGSGGGSGGYGSRRF KGGSFGGRSSGSPYGG GGYGSRRF________ R S S R F - 0 2 0 0 0 0 0 11 0 0 0 0 0 1 1 6 0 0 3 0 0 0 24 2 2212.9522 H7C1J8;P51991 H7C1J8 92 115 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 2;3 6.1966E-06 78.758 By MS/MS By MS/MS 2 2 829490000 435250000 394240000 5985 1171 6669 15047;15048;15049;15050 13748;13749;13750;13751 13751 2127;2128;2129;7467 4 SSGSSSSGLGTVSNSPASQR WWTGGQDRSSGSSSSG SNSPASQRTPGKRPIK R S S Q R T 1 1 1 0 0 1 0 3 0 0 1 0 0 0 1 9 1 0 0 1 0 0 20 0 1851.8559 Q9UPP1;H0Y3N9;H0Y589 Q9UPP1 790 809 PHF8 Histone lysine demethylase PHF8 yes no 3 0.0063498 51.938 By MS/MS By matching 1 1 4044300 2099600 1944700 5986 2868 6670 15051;15052 13752 13752 5913 1 SSGVVPQSAPPVPTASSR NYPFINIRSSGVVPQS PVPTASSRFHFPPLDT R S S S R F 2 1 0 0 0 1 0 1 0 0 0 0 0 0 4 5 1 0 0 3 0 0 18 0 1722.8901 P41162 P41162 132 149 ETV3 ETS translocation variant 3 yes yes 2 0.00054933 75.564 By matching By MS/MS 1 1 15191000 9531700 5659700 5987 1690 6671 15053;15054 13753 13753 3103 1 SSIDSQASLSGPLSGGAPGAGAR GGGGAGSRSSIDSQAS GAPGAGARDVGDGSST R S S A R D 4 1 0 1 0 1 0 5 0 1 2 0 0 0 2 6 0 0 0 0 0 0 23 0 2042.0029 A6NKD9 A6NKD9 178 200 CCDC85C Coiled-coil domain-containing protein 85C yes yes 2 0.00023155 72.568 By MS/MS 1 12249000 12249000 0 5988 420 6672 15055 13754;13755 13754 790;791 2 SSILLDVKPWDDETDMAK KKPALVAKSSILLDVK DDETDMAKLEECVRSI K S S A K L 1 0 0 4 0 0 1 0 0 1 2 2 1 0 1 2 1 1 0 1 0 0 18 1 2061.9929 P24534 P24534 140 157 EEF1B2 Elongation factor 1-beta yes yes 2;3 0.00094074 73.168 By MS/MS By MS/MS 3 3 25867000 14070000 11797000 5989 1626 6673;6674 15056;15057;15058;15059;15060;15061 13756;13757;13758;13759;13760 13760 203 3005;3006 5 SSISGSLPSSGSLQAVSSR PQGPVRHRSSISGSLP SLQAVSSRFSEEGPRS R S S S R F 1 1 0 0 0 1 0 2 0 1 2 0 0 0 1 9 0 0 0 1 0 0 19 0 1805.9119 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 356 374 RAB11FIP5 Rab11 family-interacting protein 5 yes no 2 0.0071715 58.427 By matching By MS/MS 1 1 4435800 2307400 2128500 5990 364 6675 15062;15063 13761 13761 676 1 SSKRGASPSR STSSKSSRSSKRGASP KRGASPSRHSISEWRM R S S S R H 1 2 0 0 0 0 0 1 0 0 0 1 0 0 1 4 0 0 0 0 0 0 10 2 1031.5472 Q9BZ72 Q9BZ72 313 322 PITPNM2 Membrane-associated phosphatidylinositol transfer protein 2 yes yes 2 0.018297 73.273 By MS/MS By matching 1 1 229800000 127780000 102020000 5991 2608 6676 15064;15065 13762;13763 13763 5279;5280 2 SSLAETLDSTGSLDPQR TENGIAEKSSLAETLD TGSLDPQRSDMIYTIE K S S Q R S 1 1 0 2 0 1 1 1 0 0 3 0 0 0 1 4 2 0 0 0 0 0 17 0 1775.8537 Q9UGH3 Q9UGH3 70 86 SLC23A2 Solute carrier family 23 member 2 yes yes 2 0.0087757 64.52 By MS/MS By matching 1 1 11471000 5390000 6080700 5992 2809 6677 15066;15067 13764 13764 5757;7083 1 SSLGQSASETEEDTVSVSK EEMETDARSSLGQSAS EDTVSVSKKEKNRKRR R S S S K K 1 0 0 1 0 1 3 1 0 0 1 1 0 0 0 6 2 0 0 2 0 0 19 0 1939.8858 E9PJ04;H0YCG1;E9PPJ0;Q13435 E9PJ04 300 318 SF3B2 Splicing factor 3B subunit 2 yes no 2 4.0214E-06 89.353 By MS/MS By MS/MS 1 2 20417000 10383000 10034000 5993 805 6678 15068;15069;15070 13765;13766;13767 13765 1443;1444;1445;1446;6446 3 SSLGQSASETEEDTVSVSKK EEMETDARSSLGQSAS DTVSVSKKEKNRKRRN R S S K K E 1 0 0 1 0 1 3 1 0 0 1 2 0 0 0 6 2 0 0 2 0 0 20 1 2067.9808 E9PJ04;H0YCG1;E9PPJ0;Q13435 E9PJ04 300 319 SF3B2 Splicing factor 3B subunit 2 yes no 2;3 2.7667E-19 126.9 By MS/MS By MS/MS 4 4 200720000 106720000 93990000 5994 805 6679;6680 15071;15072;15073;15074;15075;15076;15077;15078 13768;13769;13770;13771;13772;13773;13774;13775;13776;13777;13778 13770 1443;1444;1445;1446;6446 11 SSLGQSASETEEDTVSVSKKEK EEMETDARSSLGQSAS VSVSKKEKNRKRRNRK R S S E K N 1 0 0 1 0 1 4 1 0 0 1 3 0 0 0 6 2 0 0 2 0 0 22 2 2325.1183 E9PJ04;H0YCG1;E9PPJ0;Q13435 E9PJ04 300 321 SF3B2 Splicing factor 3B subunit 2 yes no 3 0.0017232 59.574 By MS/MS By MS/MS 1 1 35123000 18694000 16429000 5995 805 6681 15079;15080 13779;13780 13780 1443;1444;1445;1446;6446 2 SSLGSLQTPEAVTTR SPTLPAARSSLGSLQT TPEAVTTRKGTGLLSS R S S T R K 1 1 0 0 0 1 1 1 0 0 2 0 0 0 1 3 3 0 0 1 0 0 15 0 1545.7999 C9J6P4;Q7Z2W4 C9J6P4 386 400 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.00077951 83.856 By MS/MS By MS/MS 1 2 21969000 10921000 11047000 5996 565 6682 15081;15082;15083 13781;13782;13783 13783 1043;1044;6370 3 SSLNSSPWSGLMALGNSR SAPESKHKSSLNSSPW LMALGNSRHGHHGPGA K S S S R H 1 1 2 0 0 0 0 2 0 0 3 0 1 0 1 6 0 1 0 0 0 0 18 0 1862.8945 Q8TCJ2 Q8TCJ2 13 30 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2 0.0083852 58.071 By MS/MS By matching 1 1 6843000 4158500 2684500 5997 2377 6683 15084;15085 13784 13784 4759 1 SSLSGDEEDELFK RPSHHSQRSSLSGDEE DEEDELFKGATLKALR R S S F K G 0 0 0 2 0 0 3 1 0 0 2 1 0 1 0 3 0 0 0 0 0 0 13 0 1454.6413 A0A0A0MT60;Q5T1M5 A0A0A0MT60 1186 1198 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 3.0813E-05 119.17 By MS/MS By MS/MS 2 2 23116000 13309000 9807000 5998 238 6684 15086;15087;15088;15089 13785;13786;13787;13788 13786 433;434;435 4 SSLSGDEEDELFKGATLK RPSHHSQRSSLSGDEE LFKGATLKALRPKAQP R S S L K A 1 0 0 2 0 0 3 2 0 0 3 2 0 1 0 3 1 0 0 0 0 0 18 1 1924.9266 A0A0A0MT60;Q5T1M5 A0A0A0MT60 1186 1203 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2;3 0.00064294 72.428 By MS/MS By MS/MS 2 2 35655000 20621000 15034000 5999 238 6685 15090;15091;15092;15093 13789;13790;13791;13792 13792 433;434;435 4 SSLSNNECGSLDKTSPEMSNSNNDER GMAEHLEKSSLSNNEC SNSNNDERKKALISSR K S S E R K 0 1 5 2 1 0 3 1 0 0 2 1 1 0 1 7 1 0 0 0 0 0 26 1 2871.1883 Q5UIP0 Q5UIP0 1148 1173 RIF1 Telomere-associated protein RIF1 yes yes 3 0.0047747 49.318 By MS/MS By matching 1 1 18293000 10910000 7382800 6000 2112 6686 15094;15095 13793 13793 4182;6887 1 SSLSTVSR NGNKEGARSSLSTVSR SSLSTVSRTLEKLKPG R S S S R T 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 4 1 0 0 1 0 0 8 0 835.43995 A6PVL3 A6PVL3 102 109 KNCN Kinocilin yes yes 2 0.014109 94.309 By MS/MS By MS/MS 3 1 2407100 0 2407100 6001 424 6687 15096;15097;15098;15099 13794;13795;13796;13797;13798;13799 13798 799;800 6 SSLVTSKLAGGQVE PQDLPQRKSSLVTSKL KLAGGQVE________ K S S V E - 1 0 0 0 0 1 1 2 0 0 2 1 0 0 0 3 1 0 0 2 0 0 14 1 1374.7355 O43768 O43768 108 121 ENSA Alpha-endosulfine yes yes 2 5.1092E-05 117.08 By MS/MS By MS/MS 1 1 13099000 6703200 6395400 6002 1394 6688 15100;15101 13800;13801;13802 13802 2559;2560 3 SSLYEGLEKPESR IRVVNAFRSSLYEGLE GLEKPESRSSIHNFMT R S S S R S 0 1 0 0 0 0 3 1 0 0 2 1 0 0 1 3 0 0 1 0 0 0 13 1 1493.7362 H0YHH6;A0A0U1RQU3;E7ERY9;P20020;H0Y7S3;Q01814 H0YHH6 107 119 ATP2B1;ATP2B2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 1;Plasma membrane calcium-transporting ATPase 2 yes no 2;3 4.1575E-11 145.14 By MS/MS By MS/MS 2 2 42384000 24433000 17951000 6003 343 6689 15102;15103;15104;15105 13803;13804;13805;13806;13807;13808 13808 7246 6 SSLYFPRSPSANEK PYPSPDKRSSLYFPRS RSPSANEKSLHAESPG R S S E K S 1 1 1 0 0 0 1 0 0 0 1 1 0 1 2 4 0 0 1 0 0 0 14 1 1581.7787 B8ZZW8;E7ENZ2;E9PG19;O94868 B8ZZW8 35 48 FCHSD2 F-BAR and double SH3 domains protein 2 yes no 3 0.0015468 74.783 By MS/MS 1 2435100 2435100 0 6004 535 6690 15106 13809 13809 973 1 SSMSGLHLVK DGLALHIRSSMSGLHL MSGLHLVKQGRDRKKI R S S V K Q 0 0 0 0 0 0 0 1 1 0 2 1 1 0 0 3 0 0 0 1 0 0 10 0 1057.559 A0A0C4DGT1;Q13085 A0A0C4DGT1 77 86 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 2 1.5747E-05 129.82 By MS/MS By MS/MS 2 2 92151000 46841000 45310000 6005 298 6691;6692 15107;15108;15109;15110 13810;13811;13812;13813;13814 13810 31 533 5 SSMSGLHLVKQGR DGLALHIRSSMSGLHL LHLVKQGRDRKKIDSQ R S S G R D 0 1 0 0 0 1 0 2 1 0 2 1 1 0 0 3 0 0 0 1 0 0 13 1 1398.7402 A0A0C4DGT1;Q13085 A0A0C4DGT1 77 89 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 3 0.020278 50.484 By matching By MS/MS 1 1 9361500 5471600 3889900 6006 298 6693 15111;15112 13815 13815 533 1 SSNLEGRTKSVTR FLPPASQKSSNLEGRT GRTKSVTRPTGSSAVI K S S T R P 0 2 1 0 0 0 1 1 0 0 1 1 0 0 0 3 2 0 0 1 0 0 13 2 1433.7587 A0A0C4DH27;P03979 A0A0C4DH27 19 31 TRGV8;TRGV3 T-cell receptor gamma chain V region PT-gamma-1/2 yes no 2 0.014777 54.198 By MS/MS 1 0 0 0 6007 304 6694 15113 13816 13816 550;551;552 1 SSNTSQSQKKGQQSQFLQSR DEPASSSKSSNTSQSQ QSQFLQSRNLKCIALC K S S S R N 0 1 1 0 0 6 0 1 0 0 1 2 0 1 0 6 1 0 0 0 0 0 20 2 2253.1098 E9PFI7;Q8N3A8 E9PFI7 743 762 PARP8 Poly [ADP-ribose] polymerase 8 yes no 3 0.02178 50.178 By MS/MS 1 0 0 0 6008 780 6695 15114 13817 13817 1 SSPAAFINPPIGTVTPALK REKISLKRSSPAAFIN GTVTPALKLTKTIQRM R S S L K L 3 0 1 0 0 0 0 1 0 2 1 1 0 1 4 2 2 0 0 1 0 0 19 0 1880.0407 F6VRR5;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 126 144 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 yes no 2 0.0076136 58.09 By MS/MS By matching 1 1 5785400 3286800 2498500 6009 908 6696 15115;15116 13818 13818 1627;1628 1 SSPDDPNYSLVDDYSLLYQ RGPLPIPKSSPDDPNY DDYSLLYQ________ K S S Y Q - 0 0 1 4 0 1 0 0 0 0 3 0 0 0 2 4 0 0 3 1 0 0 19 0 2189.9641 Q9H939 Q9H939 316 334 PSTPIP2 Proline-serine-threonine phosphatase-interacting protein 2 yes yes 3 0.012187 42.612 By MS/MS 1 3541600 0 3541600 6010 2682 6697 15117 13819 13819 5471;5472;7895 1 SSPEQPIGQGR STEAPKPKSSPEQPIG EQPIGQGRIRVGTQLR K S S G R I 0 1 0 0 0 2 1 2 0 1 0 0 0 0 2 2 0 0 0 0 0 0 11 0 1154.568 Q8N201 Q8N201 1326 1336 INTS1 Integrator complex subunit 1 yes yes 2 4.5398E-06 130.01 By MS/MS 2 17158000 17158000 0 6011 2299 6698 15118;15119 13820;13821 13820 4621;4622 2 SSPEQPRPSTSK GKEARLARSSPEQPRP QPRPSTSKAVSPPHLD R S S S K A 0 1 0 0 0 1 1 0 0 0 0 1 0 0 3 4 1 0 0 0 0 0 12 1 1299.6419 H3BRN3;H3BVD2;H3BUJ5;H3BT57;P29590 H3BRN3 54 65 PML Protein PML yes no 2 1.4835E-06 121.21 By MS/MS By matching 1 1 22253000 14368000 7884900 6012 1138 6699 15120;15121 13822 13822 2074;2075 1 SSPGGQDEGGFMAQGK GWPRDGGRSSPGGQDE GGFMAQGKTGSSSPPG R S S G K T 1 0 0 1 0 2 1 5 0 0 0 1 1 1 1 2 0 0 0 0 0 0 16 0 1551.6624 F5GZ78;A0A1B0GTU4;P49023;A0A1B0GV30 F5GZ78 300 315 PXN Paxillin yes no 2 0.0031665 67.153 By MS/MS By matching 1 1 6234100 2952100 3282000 6013 367 6700 15122;15123 13823;13824 13824 682;683 2 SSPGQTPEEGAQALAEFAALHGPALR PERRPAERSSPGQTPE ALHGPALRASGVPERY R S S L R A 6 1 0 0 0 2 3 3 1 0 3 0 0 1 3 2 1 0 0 0 0 0 26 0 2604.2932 Q14166 Q14166 15 40 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 3 5.293E-13 93.74 By MS/MS By MS/MS 1 1 187330000 137310000 50019000 6014 1942 6701 15124;15125 13825;13826 13826 3747;3748 2 SSPLGQNDNSEYVPMLPGK FSLPNPFRSSPLGQND YVPMLPGKFLGRGLDK R S S G K F 0 0 2 1 0 1 1 2 0 0 2 1 1 0 3 3 0 0 1 1 0 0 19 0 2031.9572 O14654 O14654 817 835 IRS4 Insulin receptor substrate 4 yes yes 2;3 3.0554E-20 132.24 By MS/MS By MS/MS 4 4 506150000 290010000 216140000 6015 1343 6702;6703 15126;15127;15128;15129;15130;15131;15132;15133 13827;13828;13829;13830;13831;13832;13833;13834;13835 13832 159 2444;7506 9 SSPLGQNDNSEYVPMLPGKFLGR FSLPNPFRSSPLGQND LPGKFLGRGLDKEVSY R S S G R G 0 1 2 1 0 1 1 3 0 0 3 1 1 1 3 3 0 0 1 1 0 0 23 1 2505.2322 O14654 O14654 817 839 IRS4 Insulin receptor substrate 4 yes yes 3 1.4327E-25 123.42 By MS/MS By MS/MS 2 2 156550000 91467000 65084000 6016 1343 6704;6705 15134;15135;15136;15137 13836;13837;13838;13839;13840 13839 159 2444;7506 5 SSPLYEYIQEQRSQYR QFASVPVRSSPLYEYI QEQRSQYRP_______ R S S Y R P 0 2 0 0 0 3 2 0 0 1 1 0 0 0 1 3 0 0 3 0 0 0 16 1 2045.9807 Q07283 Q07283 1927 1942 TCHH Trichohyalin yes yes 3 0.0085513 48.214 By MS/MS 1 19605000 0 19605000 6017 1860 6706 15138 13841 13841 7672 1 SSPNVANQPPSPGGK MKNRADHRSSPNVANQ QPPSPGGKSAYASGTT R S S G K S 1 0 2 0 0 1 0 2 0 0 0 1 0 0 4 3 0 0 0 1 0 0 15 0 1435.7056 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1131 1145 MLLT4 Afadin yes no 2 1.7181E-36 172.93 By MS/MS By MS/MS 3 3 104610000 49897000 54709000 6018 431 6707;6708 15139;15140;15141;15142;15143;15144 13842;13843;13844;13845;13846;13847;13848;13849;13850;13851;13852;13853;13854 13842 812;813 12 SSPPLRTPDVLESSGPAVR WLQDGSARSSPPLRTP ESSGPAVRSGLNATFM R S S V R S 1 2 0 1 0 0 1 1 0 0 2 0 0 0 4 4 1 0 0 2 0 0 19 1 1964.0327 A0A0A6YYC0;E9PJN1;O75676 A0A0A6YYC0 659 677 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 yes no 3 0.0029595 60.352 By MS/MS By matching 1 1 7940100 4480900 3459200 6019 252 6709 15145;15146 13855 13855 458;6292 1 SSPQLDPLR KTQLSQGRSSPQLDPL SPQLDPLRKSPTMEQA R S S L R K 0 1 0 1 0 1 0 0 0 0 2 0 0 0 2 2 0 0 0 0 0 0 9 0 1011.5349 Q8ND56 Q8ND56 182 190 LSM14A Protein LSM14 homolog A yes yes 2 0.010457 73.841 By MS/MS By MS/MS 1 1 35531000 20325000 15206000 6020 2340 6710 15147;15148 13856;13857 13857 4693;4694 2 SSPQLDPLRK KTQLSQGRSSPQLDPL PQLDPLRKSPTMEQAV R S S R K S 0 1 0 1 0 1 0 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 1 1139.6299 Q8ND56 Q8ND56 182 191 LSM14A Protein LSM14 homolog A yes yes 2;3 0.0055584 87.667 By MS/MS By MS/MS 2 2 43092000 24437000 18654000 6021 2340 6711 15149;15150;15151;15152 13858;13859;13860;13861 13861 4693;4694 4 SSPSARPPDVPGQQPQAAK AEYPRRRRSSPSARPP GQQPQAAKSPSPVQGK R S S A K S 3 1 0 1 0 3 0 1 0 0 0 1 0 0 5 3 0 0 0 1 0 0 19 1 1916.9704 A0A0A6YYC7;Q96JP5 A0A0A6YYC7 82 100 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 yes no 3 0.0054028 55.208 By MS/MS By MS/MS 1 1 9856400 5596800 4259500 6022 253 6712 15153;15154 13862;13863 13862 459;460 2 SSPSTENMHFPSSISSQTR RPGRYFLKSSPSTENM SSISSQTRQSCISTSA K S S T R Q 0 1 1 0 0 1 1 0 1 1 0 0 1 1 2 7 2 0 0 0 0 0 19 0 2078.9327 A0A0U1RR27;Q7Z401 A0A0U1RR27 1552 1570 DENND4A C-myc promoter-binding protein yes no 3 0.01849 45.577 By matching By MS/MS 1 1 14139000 6981900 7156800 6023 347 6713 15155;15156 13864 13864 641 1 SSPSTIESFAK S S A K 1 0 0 0 0 0 1 0 0 1 0 1 0 1 1 4 1 0 0 0 0 0 11 0 1152.5663 REV__Q13415 yes yes 2 0.0033787 84.188 By MS/MS By MS/MS 3 4 1839500000 1025300000 814210000 + 6024 2992 6714;6715 15157;15158;15159;15160;15161;15162;15163 13865;13866;13867 13867 6183 3 SSPVCSTAPVETEPKLSPSWNPK DEFSASAKSSPVCSTA LSPSWNPKIIYEPHPQ K S S P K I 1 0 1 0 1 0 2 0 0 0 1 2 0 0 5 5 2 1 0 2 0 0 23 1 2497.2159 Q96BY7 Q96BY7 239 261 ATG2B Autophagy-related protein 2 homolog B yes yes 3 0.00017782 69.99 By matching By MS/MS 1 1 8378300 3961500 4416800 6025 2463 6716 15164;15165 13868 13868 4960;4961 1 SSQNWNSKNRQR ALGFVILRSSQNWNSK WNSKNRQRWSRTKAGQ R S S Q R W 0 2 3 0 0 2 0 0 0 0 0 1 0 0 0 3 0 1 0 0 0 0 12 2 1503.7291 Q8IXR5 Q8IXR5 155 166 FAM178B Protein FAM178B yes yes 2 0.0078933 64.121 By MS/MS By matching 1 1 2413600 1231900 1181700 6026 2280 6717 15166;15167 13869 13869 4578;4579 0 SSQPSPTAVPASDSPPTKQEVK RDARPPRRSSQPSPTA PPTKQEVKKAGERHKL R S S V K K 2 0 0 1 0 2 1 0 0 0 0 2 0 0 5 5 2 0 0 2 0 0 22 1 2237.1176 Q3KQU3;C9JIR3;E9PLH3 Q3KQU3 112 133 MAP7D1 MAP7 domain-containing protein 1 yes no 3 0.015825 44.743 By matching By MS/MS 1 1 6699700 3819600 2880100 6027 2036 6718 15168;15169 13870 13870 3986;3987;3988;3989;3990;6855 1 SSRFSGGFGAR GSSRGRSKSSRFSGGF FSGGFGARDYRQSSGA K S S A R D 1 2 0 0 0 0 0 3 0 0 0 0 0 2 0 3 0 0 0 0 0 0 11 1 1127.5472 A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O00571;A0A087WVZ1 A0A0D9SFB3 590 600 DDX3X ATP-dependent RNA helicase DDX3X yes no 2;3 0.0018281 98.253 By MS/MS By MS/MS 2 2 72275000 36270000 36006000 6028 311 6719 15170;15171;15172;15173 13871;13872;13873;13874 13873 563;564 4 SSRGQEEISGALPVASPASSR PALRKHFRSSRGQEEI VASPASSRTDLVKSEL R S S S R T 3 2 0 0 0 1 2 2 0 1 1 0 0 0 2 6 0 0 0 1 0 0 21 1 2085.0451 H0Y9D5;H0Y8S9;Q9UBK8 H0Y9D5 85 105 MTRR Methionine synthase reductase yes no 3 0.0098161 48.337 By MS/MS By matching 1 1 9778500 4507000 5271500 6029 1042 6720 15174;15175 13875 13875 1936;1937 1 SSSADFGTFNTSQSHQTASAVSK AHFDNFPKSSSADFGT QTASAVSKVSTNKAGL K S S S K V 3 0 1 1 0 2 0 1 1 0 0 1 0 2 0 7 3 0 0 1 0 0 23 0 2344.0567 P52594;C9J2I0;B8ZZY2 P52594 291 313 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 3 0.00042266 64.522 By matching By MS/MS 1 1 36970000 20227000 16743000 6030 1753 6721 15176;15177 13876 13876 3311 1 SSSAGGQGSYVPLLR GYPGDVDRSSSAGGQG GSYVPLLRDTDSSVAS R S S L R D 1 1 0 0 0 1 0 3 0 0 2 0 0 0 1 4 0 0 1 1 0 0 15 0 1477.7525 S4R3V8;Q86X29 S4R3V8 315 329 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.0027058 65.695 By matching By MS/MS 1 1 55101000 25643000 29458000 6031 2250 6722 15178;15179 13877 13877 7776 1 SSSAGGQGSYVPLLRDTDSSVASEVR GYPGDVDRSSSAGGQG SSVASEVRSGYRIQAS R S S V R S 2 2 0 2 0 1 1 3 0 0 2 0 0 0 1 7 1 0 1 3 0 0 26 1 2624.2678 S4R3V8;Q86X29 S4R3V8 315 340 LSR Lipolysis-stimulated lipoprotein receptor yes no 3 0.0035603 49.106 By MS/MS By MS/MS 1 2 16607000 9078800 7528300 6032 2250 6723 15180;15181;15182 13878;13879 13878 7776 2 SSSAPNVHINTIEPVNIDDLIR NQFGQRDRSSSAPNVH VNIDDLIRDQGFRGDG R S S I R D 1 1 3 2 0 0 1 0 1 4 1 0 0 0 2 3 1 0 0 2 0 0 22 0 2403.2394 P15056 P15056 363 384 BRAF Serine/threonine-protein kinase B-raf yes yes 3 3.3893E-15 119.75 By MS/MS By matching 1 1 50600000 36985000 13615000 6033 1581 6724 15183;15184 13880 13880 2905;2906 1 SSSDMDLQKK NKKLPFNRSSSDMDLQ SDMDLQKKQSNLATGL R S S K K Q 0 0 0 2 0 1 0 0 0 0 1 2 1 0 0 3 0 0 0 0 0 0 10 1 1137.5336 A0A0U1RQE4;Q5HYK7 A0A0U1RQE4 647 656 SH3D19 SH3 domain-containing protein 19 yes no 2 0.0090563 80.834 By matching By MS/MS 1 1 6123200 3222200 2901100 6034 336 6725 15185;15186 13881 13881 628 1 SSSDSWEPTSAGSK NGHLSRKRSSSDSWEP EPTSAGSKQNKFPEKR R S S S K Q 1 0 0 1 0 0 1 1 0 0 0 1 0 0 1 6 1 1 0 0 0 0 14 0 1424.6056 B1AL16;Q8IX21 B1AL16 315 328 FAM178A Protein FAM178A yes no 2 0.0086153 64.244 By matching By MS/MS 1 1 8761700 4248300 4513400 6035 460 6726 15187;15188 13882 13882 888 1 SSSEDAESLAPR VRTGKRKRSSSEDAES DAESLAPRSKVKKIIQ R S S P R S 2 1 0 1 0 0 2 0 0 0 1 0 0 0 1 4 0 0 0 0 0 0 12 0 1247.563 Q4G0J3;H0YA82 Q4G0J3 298 309 LARP7 La-related protein 7 yes no 2 9.0232E-14 156 By MS/MS By MS/MS 1 1 113810000 60614000 53191000 6036 2046 6727 15189;15190 13883;13884;13885;13886 13883 4001;4002;4003 4 SSSEITLSECDAEDAGEPR AFLPLRHRSSSEITLS AEDAGEPRGARHTGAL R S S P R G 2 1 0 2 1 0 4 1 0 1 1 0 0 0 1 4 1 0 0 0 0 0 19 0 2051.859 O60292 O60292 170 188 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 yes yes 2 3.9956E-06 92.236 By MS/MS By MS/MS 1 1 10039000 5152100 4887300 6037 1401 6728 15191;15192 13887;13888 13887 2572;2573;2574 2 SSSELNGVSTTSVVK YKPRPVKRSSSELNGV VSTTSVVKTTGSNIPM R S S V K T 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 5 2 0 0 3 0 0 15 0 1493.7573 Q99963 Q99963 263 277 SH3GL3 Endophilin-A3 yes yes 2 1.3042E-15 137.46 By MS/MS By MS/MS 5 4 119280000 85772000 33511000 6038 2565 6729;6730 15193;15194;15195;15196;15197;15198;15199;15200;15201 13889;13890;13891;13892;13893;13894;13895 13890 26 5176;5177;5178 7 SSSESYTQSFQSR ETARSHQRSSSESYTQ YTQSFQSRKPFFSWW_ R S S S R K 0 1 0 0 0 2 1 0 0 0 0 0 0 1 0 6 1 0 1 0 0 0 13 0 1492.643 Q9BTU6;E9PAM4 Q9BTU6 460 472 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes no 2 0.00017642 112.83 By MS/MS By MS/MS 1 1 88568000 46913000 41655000 6039 2578 6731 15202;15203 13896;13897 13896 5209;5210;5211 2 SSSETILSSLAGSDIVK SHRKPLKRSSSETILS LAGSDIVKGHEETCIR R S S V K G 1 0 0 1 0 0 1 1 0 2 2 1 0 0 0 6 1 0 0 1 0 0 17 0 1692.8782 Q01850 Q01850 309 325 CDR2 Cerebellar degeneration-related protein 2 yes yes 2 3.1906E-46 179.67 By MS/MS By MS/MS 1 1 61697000 38541000 23157000 6040 1835 6732 15204;15205 13898;13899 13898 3436 2 SSSFGSVSTSSNSSK FTTNRNQRSSSFGSVS STSSNSSKGQLEDSNM R S S S K G 0 0 1 0 0 0 0 1 0 0 0 1 0 1 0 9 1 0 0 1 0 0 15 0 1447.6427 E5RG30;E5RJ65;E5RHF1;E5RGS8;E5RH07;E5RGQ6;A0A0C4DGW2;P57768 E5RG30 27 41 SNX16 Sorting nexin-16 yes no 2 0.018602 55.851 By MS/MS By matching 2 1 5843400 3820100 2023300 6041 302 6733 15206;15207;15208 13900 13900 546 1 SSSFPYTTK PTGGLMQRSSSFPYTT SSFPYTTKGSGLGSPT R S S T K G 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 3 2 0 1 0 0 0 9 0 1016.4815 O43524 O43524 411 419 FOXO3 Forkhead box protein O3 yes yes 2 0.007368 79.201 By MS/MS By MS/MS 1 1 10684000 5141600 5542800 6042 1389 6734 15209;15210 13901;13902 13902 2549 2 SSSFQAEVSLV RVSPGARRSSSFQAEV FQAEVSLV________ R S S L V - 1 0 0 0 0 1 1 0 0 0 1 0 0 1 0 4 0 0 0 2 0 0 11 0 1152.5663 P32241 P32241 447 457 VIPR1 Vasoactive intestinal polypeptide receptor 1 yes yes 2 0.015349 65.465 By MS/MS 1 19497000 19497000 0 6043 1666 6735 15211 13903 13903 3065 1 SSSFSLPSR NGFSTMQRSSSFSLPS SSFSLPSRANVLSSPC R S S S R A 0 1 0 0 0 0 0 0 0 0 1 0 0 1 1 5 0 0 0 0 0 0 9 0 966.47706 Q14153 Q14153 165 173 FAM53B Protein FAM53B yes yes 2 0.0045955 87.476 By MS/MS By MS/MS 1 1 22541000 13012000 9528200 6044 1941 6736 15212;15213 13904;13905 13905 3745;3746 2 SSSFSSWDDSSDSYWK FDEPVELRSSSFSSWD DSSDSYWKKETSKDTE R S S W K K 0 0 0 3 0 0 0 0 0 0 0 1 0 1 0 8 0 2 1 0 0 0 16 0 1869.733 Q9NP61 Q9NP61 365 380 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes yes 2 0.00018091 98.182 By matching By MS/MS 1 1 6901200 3809100 3092100 6045 2701 6737 15214;15215 13906 13906 5511 1 SSSFVLPK PIKSKKKRSSSFVLPK SSSFVLPKLVKSQLQK R S S P K L 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 3 0 0 0 1 0 0 8 0 863.47527 Q8WYP3 Q8WYP3 484 491 RIN2 Ras and Rab interactor 2 yes yes 2 0.014536 88.495 By MS/MS By MS/MS 1 1 1441200 1441200 0 6046 2416 6738 15216;15217 13907;13908 13907 4846 2 SSSGLQSSRSNPSIQATLNK AMTHLGIRSSSGLQSS SIQATLNKTVLSSSLN R S S N K T 1 1 2 0 0 2 0 1 0 1 2 1 0 0 1 7 1 0 0 0 0 0 20 1 2061.0451 Q6UUV7 Q6UUV7 320 339 CRTC3 CREB-regulated transcription coactivator 3 yes yes 3 0.019208 44.577 By matching By MS/MS 1 1 5671800 3774900 1896900 6047 2169 6739 15218;15219 13909 13909 4336 1 SSSHEAGLQQGSLGGVYK LGSRSTLRSSSHEAGL GSLGGVYKTVVHALSK R S S Y K T 1 0 0 0 0 2 1 4 1 0 2 1 0 0 0 4 0 0 1 1 0 0 18 0 1803.8751 A0A1B0GUI1 A0A1B0GUI1 1210 1227 yes yes 3 0.014684 47.916 By matching By MS/MS 1 1 4113700 2180300 1933400 6048 371 6740 15220;15221 13910 13910 702 1 SSSISEEKGDSDDEKPR LSRHSPRKSSSISEEK DSDDEKPRKGERRSSR K S S P R K 0 1 0 3 0 0 3 1 0 1 0 2 0 0 1 5 0 0 0 0 0 0 17 2 1864.8286 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 148 164 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 2.2907E-05 93.062 By MS/MS By MS/MS 1 2 63691000 25079000 38612000 6049 725 6741 15222;15223;15224 13911;13912;13913;13914 13913 1298 4 SSSKGSVEEIMSQPK SGHLTHSRSSSKGSVE EEIMSQPKQKELAGSV R S S P K Q 0 0 0 0 0 1 2 1 0 1 0 2 1 0 1 5 0 0 0 1 0 0 15 1 1592.7716 A0A087WVA8;Q8IWB9;J3KRZ8 A0A087WVA8 746 760 TEX2 Testis-expressed sequence 2 protein yes no 3 0.017682 58.672 By MS/MS By MS/MS 1 1 1038200 0 1038200 6050 59 6742 15225;15226 13915;13916 13915 107 2 SSSLDMNR RPQPSHSRSSSLDMNR SSSLDMNRTFTVTTGQ R S S N R T 0 1 1 1 0 0 0 0 0 0 1 0 1 0 0 3 0 0 0 0 0 0 8 0 908.40218 E9PMG1;H0YDT0;Q96D71 E9PMG1 533 540 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 2 0.0054102 109.83 By MS/MS By MS/MS 1 2 33004000 13915000 19088000 6051 828 6743 15227;15228;15229 13917;13918;13919;13920 13918 1482;1483 4 SSSLEGFHNHFK PRAFPSDRSSSLEGFH EGFHNHFKVKNVLTVG R S S F K V 0 0 1 0 0 0 1 1 2 0 1 1 0 2 0 3 0 0 0 0 0 0 12 0 1388.6473 B7Z3B9;Q13480 B7Z3B9 314 325 GAB1 GRB2-associated-binding protein 1 yes no 2;3 0.0057295 71.933 By MS/MS By MS/MS 2 2 26148000 11648000 14499000 6052 513 6744 15230;15231;15232;15233 13921;13922;13923 13922 953 3 SSSLEMTPYNTPQLSPATTPANKK LPPAKPGKSSSLEMTP ATTPANKKNRLPIATR K S S K K N 2 0 2 0 0 1 1 0 0 0 2 2 1 0 4 4 4 0 1 0 0 0 24 1 2562.2636 Q14C86;H0Y7I9;C9IZ08;H0Y4E7;F8W9S7;B4DGD8;A0A0A0MQV8;B0QZ65 Q14C86 452 475 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 3 0.00041957 59.537 By MS/MS By MS/MS 3 3 32876000 18671000 14205000 6053 1964 6745;6746 15234;15235;15236;15237;15238;15239 13924;13925;13926;13927;13928 13927 263 3828;3829;3830;3831;6826;6827 5 SSSLESLQTAVAEVR GPTLGLKKSSSLESLQ QTAVAEVRKNDLPFHR K S S V R K 2 1 0 0 0 1 2 0 0 0 2 0 0 0 0 4 1 0 0 2 0 0 15 0 1575.8104 A0A087WZG6;A0A087X1S9;Q8TEW8;R4GN62 A0A087WZG6 670 684 PARD3B Partitioning defective 3 homolog B yes no 2 0.000217 106.6 By MS/MS By matching 1 1 10407000 5322700 5084500 6054 112 6747 15240;15241 13929 13929 204 1 SSSLGSTPHEELER NPSRSGSRSSSLGSTP TPHEELERLAGLEQAI R S S E R L 0 1 0 0 0 0 3 1 1 0 2 0 0 0 1 4 1 0 0 0 0 0 14 0 1527.7165 Q9NRA8;B1AKL4 Q9NRA8 351 364 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 2 0.0069221 72.209 By MS/MS 1 0 0 0 6055 2719 6748 15242 13930 13930 5553;5554 1 SSSLIQLTSQNSSPNQQR SNNPPLQRSSSLIQLT NSSPNQQRTPQVIGVM R S S Q R T 0 1 2 0 0 4 0 0 0 1 2 0 0 0 1 6 1 0 0 0 0 0 18 0 1973.9766 H7C419;O95639 H7C419 82 99 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 yes no 2;3 1.9675E-19 133.96 By MS/MS By MS/MS 2 2 86365000 43314000 43051000 6056 1184 6749 15243;15244;15245;15246 13931;13932;13933 13931 2147;2148;2149 3 SSSLIRHYQIHTEVK ECGKSFIRSSSLIRHY YQIHTEVKQYECKECG R S S V K Q 0 1 0 0 0 1 1 0 2 2 1 1 0 0 0 3 1 0 1 1 0 0 15 1 1796.9533 A0A0A0MT18;A0A0J9YW98;O75123 A0A0A0MT18 235 249 ZNF623 Zinc finger protein 623 yes no 3 0.019581 48.423 By MS/MS 1 991680 991680 0 6057 234 6750 15247 13934 13934 423 1 SSSMAAGLER TENKTLPRSSSMAAGL SMAAGLER________ R S S E R - 2 1 0 0 0 0 1 1 0 0 1 0 1 0 0 3 0 0 0 0 0 0 10 0 1007.4706 I3L0Y9;B4DWA1;I3L4C2;Q9UQB8;I3L3C6 I3L0Y9 121 130 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 no no 2 0.0098166 71.555 By MS/MS By MS/MS 1 1 19162000 11637000 7524800 6058 495;1212 6751 15248;15249 13935;13936 13935 932;933 2 SSSMSSIDLVSASDDVHR FVQKPYSRSSSMSSID SASDDVHRFSSQVEEM R S S H R F 1 1 0 3 0 0 0 0 1 1 1 0 1 0 0 7 0 0 0 2 0 0 18 0 1891.8582 Q9Y5P4 Q9Y5P4 375 392 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 2;3 0.00011679 78.708 By MS/MS By MS/MS 3 3 24259000 12135000 12123000 6059 2932 6752;6753 15250;15251;15252;15253;15254;15255 13937;13938;13939;13940;13941 13938 384 6093;6094;6095;6096 5 SSSMSSLTGAYASGIPSSSR DHLNKRSRSSSMSSLT SGIPSSSRNAITSSYS R S S S R N 2 1 0 0 0 0 0 2 0 1 1 0 1 0 1 9 1 0 1 0 0 0 20 0 1931.8895 Q96HA1 Q96HA1 391 410 POM121 Nuclear envelope pore membrane protein POM 121 yes yes 2 0.00043464 73.918 By MS/MS By MS/MS 1 2 15613000 7164400 8448400 6060 2498 6754;6755 15256;15257;15258 13942;13943;13944;13945;13946 13944 334 5026;5027;5028;5029;5030 5 SSSMSSLTGAYTSGIPSSSR DHLNKRSRSSSMSSLT SGIPSSSRNAITSSYS R S S S R N 1 1 0 0 0 0 0 2 0 1 1 0 1 0 1 9 2 0 1 0 0 0 20 0 1961.9 A0A087WY75;A0A075B7F8;A8CG34 A0A087WY75 126 145 POM121C Nuclear envelope pore membrane protein POM 121C yes no 2 6.4224E-08 88.78 By MS/MS By MS/MS 2 2 26893000 14903000 11990000 6061 18 6756;6757 15259;15260;15261;15262 13947;13948;13949;13950;13951;13952 13951 4 39;40;41 6 SSSMSYVDGFIGTWPK SASGGIRRSSSMSYVD GFIGTWPKEKRSSVHG R S S P K E 0 0 0 1 0 0 0 2 0 1 0 1 1 1 1 4 1 1 1 1 0 0 16 0 1760.808 Q08AD1 Q08AD1 414 429 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 3.236E-06 114.24 By MS/MS By MS/MS 2 2 35134000 21039000 14095000 6062 1868 6758;6759 15263;15264;15265;15266 13953;13954;13955 13955 3522;3523;3524 3 SSSPAPADIAQTVQEDLR TAPEDAQKSSSPAPAD QTVQEDLRTFSWASVT K S S L R T 3 1 0 2 0 2 1 0 0 1 1 0 0 0 2 3 1 0 0 1 0 0 18 0 1883.9225 Q13283 Q13283 230 247 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2;3 3.1688E-09 113.33 By MS/MS By MS/MS 4 4 5093600000 2632400000 2461200000 6063 1909 6760;6761 15267;15268;15269;15270;15271;15272;15273;15274 13956;13957;13958;13959;13960;13961;13962;13963;13964;13965 13961 35 3657;3658;3659 10 SSSPATEQSWMENDFDELREEGFR ASPPPKERSSSPATEQ ELREEGFRRSNYSELR R S S F R R 1 2 1 2 0 1 5 1 0 0 1 0 1 2 1 4 1 1 0 0 0 0 24 1 2846.209 Q9UN81 Q9UN81 25 48 L1RE1 LINE-1 retrotransposable element ORF1 protein yes yes 3 0.00037408 63.302 By MS/MS By matching 1 1 17115000 14763000 2351900 6064 2861 6762 15275;15276 13966 13966 5896;5897 1 SSSPEDPGAEV SRDHFRNKSSSPEDPG PEDPGAEV________ K S S E V - 1 0 0 1 0 0 2 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 11 0 1073.4513 Q9Y5U2 Q9Y5U2 319 329 TSSC4 Protein TSSC4 yes yes 2 0.0010071 102.52 By MS/MS By MS/MS 1 1 6351200 3744800 2606400 6065 2937 6763 15277;15278 13967;13968 13967 6103;6104 2 SSSPELVTHLK FPKSDDSKSSSPELVT PELVTHLKWDDPYYDI K S S L K W 0 0 0 0 0 0 1 0 1 0 2 1 0 0 1 3 1 0 0 1 0 0 11 0 1196.6401 E9PNR6;H0YE29;Q07960 E9PNR6 49 59 ARHGAP1 Rho GTPase-activating protein 1 yes no 2 0.00036383 109.72 By MS/MS By MS/MS 1 1 26454000 11534000 14920000 6066 833 6764 15279;15280 13969;13970 13970 1507 2 SSSPFLSK PSPYGRRRSSSPFLSK SSSPFLSKRSLSRSPL R S S S K R 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 4 0 0 0 0 0 0 8 0 851.43888 J3QSD7;Q9NYV4 J3QSD7 332 339 CDK12 Cyclin-dependent kinase 12 yes no 2 0.023496 60.682 By MS/MS 1 1095400 1095400 0 6067 1260 6765 15281 13971 13971 1 SSSPGKLLGSGYGGLTGGSSR NPAGAGSRSSSPGKLL GLTGGSSRGPPVTPSS R S S S R G 0 1 0 0 0 0 0 7 0 0 3 1 0 0 1 6 1 0 1 0 0 0 21 1 1923.965 Q7Z460;H0Y5T1;F8WA11 Q7Z460 686 706 CLASP1 CLIP-associating protein 1 yes no 3 0.0013018 63.184 By MS/MS By MS/MS 1 1 15419000 7942800 7476200 6068 2217 6766 15282;15283 13972;13973 13972 4430;4431 2 SSSPGKPQAVSSLNSSHSR GSEHSKSRSSSPGKPQ SLNSSHSRSHGNDHHS R S S S R S 1 1 1 0 0 1 0 1 1 0 1 1 0 0 2 8 0 0 0 1 0 0 19 1 1911.9399 Q9UHB7 Q9UHB7 178 196 AFF4 AF4/FMR2 family member 4 yes yes 3 3.9185E-14 124.98 By MS/MS By MS/MS 1 1 68688000 33755000 34933000 6069 2813 6767 15284;15285 13974;13975 13975 5775;5776;5777 2 SSSPHDKNLPQK PSGASSPRSSSPHDKN HDKNLPQKSTAPVKTK R S S Q K S 0 0 1 1 0 1 0 0 1 0 1 2 0 0 2 3 0 0 0 0 0 0 12 1 1336.6735 O75592 O75592 2804 2815 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2;3 0.0012057 87.863 By MS/MS By MS/MS 2 2 24248000 12669000 11580000 6070 1444 6768 15286;15287;15288;15289 13976;13977;13978 13977 2675 3 SSSPIPLTPSKEGSAVFAGFEGR KKTPVHSRSSSPIPLT VFAGFEGRRTNEINEV R S S G R R 2 1 0 0 0 0 2 3 0 1 1 1 0 2 3 5 1 0 0 1 0 0 23 1 2320.1699 Q8N5Y2 Q8N5Y2 398 420 MSL3 Male-specific lethal 3 homolog yes yes 3 0.001177 57.986 By MS/MS By matching 1 1 13575000 7675900 5899500 6071 2319 6769 15290;15291 13979;13980 13980 4656;6958 2 SSSPLPTVQLHPQSPTAGKK PDLARHYKSSSPLPTV QSPTAGKKHQAVQDLP K S S K K H 1 0 0 0 0 2 0 1 1 0 2 2 0 0 4 4 2 0 0 1 0 0 20 1 2059.1062 O60245;A0A087X2C4;H0YAH0 O60245 998 1017 PCDH7 Protocadherin-7 yes no 3 0.0041389 51.089 By MS/MS By matching 1 1 7367900 3989500 3378300 6072 1399 6770 15292;15293 13981 13981 2568 1 SSSPNSPLPMFR KKNKLPSKSSSPNSPL NSPLPMFRRTKQEIKS K S S F R R 0 1 1 0 0 0 0 0 0 0 1 0 1 1 3 4 0 0 0 0 0 0 12 0 1318.634 A0A0U1RR27;Q7Z401;H3BTW5 A0A0U1RR27 726 737 DENND4A C-myc promoter-binding protein yes no 2 0.021109 59.931 By matching By MS/MS 1 1 2404100 1363400 1040700 6073 347 6771 15294;15295 13982 13982 642 1 SSSPRGEASSLNGESH NTERGMSRSSSPRGEA SSLNGESH________ R S S S H - 1 1 1 0 0 0 2 2 1 0 1 0 0 0 1 6 0 0 0 0 0 0 16 1 1600.7077 Q8IY57 Q8IY57 165 180 YAF2 YY1-associated factor 2 yes yes 2 4.3378E-09 125.67 By MS/MS By MS/MS 2 2 21262000 10910000 10352000 6074 2285 6772;6773 15296;15297;15298;15299 13983;13984;13985 13984 23 4585 3 SSSPTQYGLTK ITPVNQSRSSSPTQYG PTQYGLTKNFSSLHLN R S S T K N 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 3 2 0 1 0 0 0 11 0 1167.5772 Q9NYL2 Q9NYL2 635 645 ZAK Mitogen-activated protein kinase kinase kinase MLT yes yes 2 0.002933 86.882 By MS/MS By MS/MS 1 1 36671000 20227000 16443000 6075 2760 6774 15300;15301 13986;13987 13986 5664 2 SSSPTSYWK ASDDGSLKSSSPTSYW SSPTSYWKSLAPDRSD K S S W K S 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 4 1 1 1 0 0 0 9 0 1041.4767 A0A0D9SFK2;Q92614 A0A0D9SFK2 1989 1997 MYO18A Unconventional myosin-XVIIIa yes no 2 0.0056836 83.869 By MS/MS 1 1177700 1177700 0 6076 315 6775 15302 13988 13988 575 1 SSSPVGLAK LEHRPSQRSSSPVGLA SSPVGLAKWFGSDVLQ R S S A K W 1 0 0 0 0 0 0 1 0 0 1 1 0 0 1 3 0 0 0 1 0 0 9 0 844.46543 Q9NRA8;B1AKL4 Q9NRA8 949 957 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 2 0.0018385 128.35 By MS/MS By MS/MS 1 1 22805000 11322000 11483000 6077 2719 6776 15303;15304 13989;13990 13989 5555 2 SSSPVQVEEEPVR TTPIGNARSSSPVQVE QVEEEPVRLASLRKAI R S S V R L 0 1 0 0 0 1 3 0 0 0 0 0 0 0 2 3 0 0 0 3 0 0 13 0 1441.7049 Q8IZ21;A0A0J9YVR0 Q8IZ21 116 128 PHACTR4 Phosphatase and actin regulator 4 yes no 2 0.0049646 73.219 By MS/MS By MS/MS 1 1 120580000 72196000 48385000 6078 2291 6777 15305;15306 13991;13992 13992 4598;4599;4600 2 SSSPVTELASR SPKGGRSRSSSPVTEL PVTELASRSPIRQDRG R S S S R S 1 1 0 0 0 0 1 0 0 0 1 0 0 0 1 4 1 0 0 1 0 0 11 0 1132.5724 Q9UQ35 Q9UQ35 1101 1111 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0021578 91.658 By MS/MS By MS/MS 1 1 6504100 2630500 3873600 6079 2877 6778 15307;15308 13993;13994 13993 5996;5997;5998 2 SSSQGPLSSIR ERNKPEHRSSSQGPLS QGPLSSIRAVIKRSSR R S S I R A 0 1 0 0 0 1 0 1 0 1 1 0 0 0 1 5 0 0 0 0 0 0 11 0 1117.5728 A0A0U1RQE4 A0A0U1RQE4 49 59 yes yes 2 0.0048407 76.228 By matching By MS/MS 1 1 18346000 9814500 8531900 6080 336 6779 15309;15310 13995 13995 629 1 SSSQSTFHIPLSPVEVKPGNVR LKYIGKPKSSSQSTFH EVKPGNVRNIIQHFEN K S S V R N 0 1 1 0 0 1 1 1 1 1 1 1 0 1 3 5 1 0 0 3 0 0 22 1 2365.239 O15085 O15085 545 566 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 3 0.00056948 65.741 By matching By MS/MS 1 1 19226000 8730800 10495000 6081 1357 6780 15311;15312 13996 13996 2481 1 SSSSGSDDYAYTQALLLHQR KGSHKYQRSSSSGSDD QALLLHQRARMERLAK R S S Q R A 2 1 0 2 0 2 0 1 1 0 3 0 0 0 0 5 1 0 2 0 0 0 20 0 2198.024 F6SS63;Q8N5C8 F6SS63 504 523 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 yes no 2;3 3.8064E-08 86.625 By MS/MS By MS/MS 2 2 23741000 13038000 10703000 6082 904 6781 15313;15314;15315;15316 13997;13998;13999;14000 13997 1619;1620;1621;1622;1623 4 SSSSLLASPGHISVKEPTPSIASDISLPIATQELR QGLHDLGRSSSSLLAS PIATQELRQRLRQLEN R S S L R Q 3 1 0 1 0 1 2 1 1 4 4 1 0 0 4 9 2 0 0 1 0 0 35 1 3587.9047 H7BXI1;A0A087WXU3;A0FGR8 H7BXI1 699 733 ESYT2 Extended synaptotagmin-2 yes no 4 6.2174E-06 63.657 By MS/MS 1 42051000 42051000 0 6083 89 6782 15317 14001 14001 164;165;167 1 SSSSPELQTLQDILGDPGDKADVGR QPSQPLSKSSSSPELQ GDKADVGRLSPEVKAR K S S G R L 1 1 0 4 0 2 1 3 0 1 3 1 0 0 2 4 1 0 0 1 0 0 25 1 2584.2617 P49815;H3BMQ0;H3BQK4 P49815 1385 1409 TSC2 Tuberin yes no 3 8.1959E-14 94.96 By MS/MS By MS/MS 1 1 24406000 15197000 9208400 6084 1731 6783 15318;15319 14002;14003 14002 3273;3274 2 SSSSSASPSSPSSR KREQDHSRSSSSSASP SPSSPSSREEKESKKE R S S S R E 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 0 0 0 14 0 1309.5746 Q9NYF8;E9PK91;H0YF63 Q9NYF8 751 764 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 4.5006E-12 131.08 By MS/MS By MS/MS 1 1 10362000 5929600 4432000 6085 2759 6784 15320;15321 14004;14005;14006;14007 14006 5655;5656;5657;5658;5659 4 SSSSSASPSSPSSREEK KREQDHSRSSSSSASP SPSSREEKESKKEREE R S S E K E 1 1 0 0 0 0 2 0 0 0 0 1 0 0 2 10 0 0 0 0 0 0 17 1 1695.7548 Q9NYF8;E9PK91;H0YF63 Q9NYF8 751 767 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 0.00020513 78.505 By MS/MS By matching 2 2 23935000 14522000 9412300 6086 2759 6785 15322;15323;15324;15325 14008;14009 14009 5655;5656;5657;5658;5659 2 SSSSSGVPYSPAIPNK GLKEHFHKSSSSSGVP YSPAIPNKRKDTPTKK K S S N K R 1 0 1 0 0 0 0 1 0 1 0 1 0 0 3 6 0 0 1 1 0 0 16 0 1576.7733 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5 A0A0A0MRE1 196 211 EXOC7 Exocyst complex component 7 yes no 2 0.013663 56.872 By matching By MS/MS 1 1 7350700 3977700 3372900 6087 179 6786 15326;15327 14010 14010 319 1 SSSSSSQPEHSAMLVSTAASPSLIK SHDRCLEKSSSSSSQP AASPSLIKETTTGYYK K S S I K E 3 0 0 0 0 1 1 0 1 1 2 1 1 0 2 10 1 0 0 1 0 0 25 0 2488.2115 P42166 P42166 291 315 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2;3 2.2365E-06 76.744 By MS/MS By MS/MS 3 3 40370000 21442000 18929000 6088 1695 6787;6788 15328;15329;15330;15331;15332;15333 14011;14012;14013;14014 14012 211 3111;3112 4 SSSSVSPSSNAPGSCSPDGVDQQLLDDFHR AQSYLTQKSSSSVSPS QLLDDFHRVTKGGSTE K S S H R V 1 1 1 4 1 2 0 2 1 0 2 0 0 1 3 9 0 0 0 2 0 0 30 0 3132.369 J3KN34;P26045 J3KN34 454 483 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 yes no 3 0.012037 43.091 By MS/MS 1 3961900 0 3961900 6089 1221 6789 15334 14015 14015 2212;2213 1 SSSTSDILEPFTVER NEEQPLPRSSSTSDIL LEPFTVERAKGAVPVI R S S E R A 0 1 0 1 0 0 2 0 0 1 1 0 0 1 1 4 2 0 0 1 0 0 15 0 1666.805 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 795 809 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 2 0.00033013 95.195 By MS/MS By matching 1 1 42623000 24174000 18449000 6090 371 6790 15335;15336 14016 14016 703 1 SSSVGSSSSYPISPAVSR NAGGFRSRSSSVGSSS PISPAVSRTQLASWSD R S S S R T 1 1 0 0 0 0 0 1 0 1 0 0 0 0 2 9 0 0 1 2 0 0 18 0 1753.8483 Q15149 Q15149 4384 4401 PLEC Plectin yes yes 2 7.8088E-06 95.264 By MS/MS By MS/MS 2 2 92988000 47348000 45641000 6091 1979 6791;6792 15337;15338;15339;15340 14017;14018;14019;14020;14021 14021 3860;3861;3862;3863 5 SSSVLSLEGSEK GSPRLVSRSSSVLSLE LSLEGSEKGLARHGSA R S S E K G 0 0 0 0 0 0 2 1 0 0 2 1 0 0 0 5 0 0 0 1 0 0 12 0 1221.6089 A1L390;G3V311;A0A0U1RR71 A1L390 638 649 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.0072929 67.964 By MS/MS 1 0 0 0 6092 391 6793 15341 14022 14022 749;750 1 SSSVSPSASFR QRDRDSIKSSSVSPSA VSPSASFRGAEKHRNS K S S F R G 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 6 0 0 0 1 0 0 11 0 1110.5306 Q04727;H7C4W5;H7C4P7;Q5JSY7 Q04727 204 214 TLE4 Transducin-like enhancer protein 4 yes no 2 0.028566 54.343 By MS/MS By matching 1 1 9783400 4761200 5022200 6093 1851 6794 15342;15343 14023 14023 1 SSSVSPSSWK SVSSASWKSSSVSPSS SVSPSSWKSPPASPES K S S W K S 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 6 0 1 0 1 0 0 10 0 1050.4982 Q96JM3 Q96JM3 372 381 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0030109 84.479 By MS/MS By MS/MS 1 1 6450400 3706700 2743700 6094 2509 6795 15344;15345 14024;14025 14024 5069;5070 2 SSSVSPSSWKSPPASPESWK SVSSASWKSSSVSPSS PASPESWKSGPPELRK K S S W K S 1 0 0 0 0 0 1 0 0 0 0 2 0 0 4 9 0 2 0 1 0 0 20 1 2117.0065 Q96JM3 Q96JM3 372 391 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.0047645 58.01 By MS/MS By MS/MS 1 2 14469000 7771600 6697300 6095 2509 6796 15346;15347;15348 14026;14027 14027 5066;5067;5068;5069;5070 2 SSSVTSIDKESR DNSFSRSRSSSVTSID TSIDKESREAISALHF R S S S R E 0 1 0 1 0 0 1 0 0 1 0 1 0 0 0 5 1 0 0 1 0 0 12 1 1294.6365 H0Y332;Q5JRH0;Q5T5C0 H0Y332 106 117 STXBP5 Syntaxin-binding protein 5 yes no 2 0.027415 54.066 By MS/MS 1 5220000 0 5220000 6096 1009 6797 15349 14028 14028 0 SSTDSLPGPISR ERKERLMRSSTDSLPG SLPGPISRQPLGATSG R S S S R Q 0 1 0 1 0 0 0 1 0 1 1 0 0 0 2 4 1 0 0 0 0 0 12 0 1215.6095 Q9HCD5 Q9HCD5 377 388 NCOA5 Nuclear receptor coactivator 5 yes yes 2 0.0078017 70.412 By matching By MS/MS 1 1 9260000 4347300 4912600 6097 2692 6798 15350;15351 14029 14029 5493;5494 1 SSTETCYSAIPK ILVESVTRSSTETCYS TCYSAIPKASSDASKV R S S P K A 1 0 0 0 1 0 1 0 0 1 0 1 0 0 1 3 2 0 1 0 0 0 12 0 1342.6075 O75369;E7EN95;A0A0A0MT44 O75369 2496 2507 FLNB Filamin-B yes no 2 0.0053885 67.726 By MS/MS By MS/MS 1 1 18642000 9726500 8915600 6098 1434 6799 15352;15353 14030;14031 14030 7533 2 SSTFPQTDVLSSSLEAEHR VISQQIIRSSTFPQTD SSLEAEHRLLKEMGWQ R S S H R L 1 1 0 1 0 1 2 0 1 0 2 0 0 1 1 5 2 0 0 1 0 0 19 0 2089.9916 D4PHA4;Q86WP2 D4PHA4 389 407 GPBP1 Vasculin yes no 3 0.014568 47.288 By MS/MS By MS/MS 1 1 13313000 8092200 5221300 6099 641 6800 15354;15355 14032;14033 14032 1162 2 SSTLSSSSMSLSPK SGSELNSRSSTLSSSS SSMSLSPKLCAEKEAA R S S P K L 0 0 0 0 0 0 0 0 0 0 2 1 1 0 1 8 1 0 0 0 0 0 14 0 1397.6708 O15119 O15119 696 709 TBX3 T-box transcription factor TBX3 yes yes 2 0.00081117 97.904 By MS/MS By MS/MS 1 1 11921000 6922000 4998500 6100 1359 6801 15356;15357 14034;14035 14034 2484 2 SSTPKGDMSAVNDESF STDKGSSRSSTPKGDM SAVNDESF________ R S S S F - 1 0 1 2 0 0 1 1 0 0 0 1 1 1 1 4 1 0 0 1 0 0 16 1 1670.7094 Q8N488 Q8N488 213 228 RYBP RING1 and YY1-binding protein yes yes 2 0.0019932 79.652 By MS/MS By MS/MS 3 3 36018000 18235000 17783000 6101 2310 6802;6803 15358;15359;15360;15361;15362;15363 14036;14037;14038;14039;14040 14036 4642;4643;6957 5 SSTPLHSPSPIR SREGSPARSSTPLHSP LHSPSPIRVHTVVDRP R S S I R V 0 1 0 0 0 0 0 0 1 1 1 0 0 0 3 4 1 0 0 0 0 0 12 0 1277.6728 O95817;C9JFK9 O95817 283 294 BAG3 BAG family molecular chaperone regulator 3 yes no 3 0.0059557 65.374 By MS/MS By matching 1 1 3394600 2106800 1287800 6102 1502 6804 15364;15365 14041 14041 2784 1 SSTPLPTISSSAENTR REQGTESRSSTPLPTI SSSAENTRQNGSNDSD R S S T R Q 1 1 1 0 0 0 1 0 0 1 1 0 0 0 2 5 3 0 0 0 0 0 16 0 1646.8111 P42166;G5E972;P42167;H0YJH7 G5E972 158 173 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 2.5401E-06 115.58 By MS/MS By MS/MS 1 1 535910000 287080000 248830000 6103 990;1695 6805 15366;15367 14042;14043 14042 1815;1816;6500 2 SSTPPGESYFGVSSLQLK LSLCAGVKSSTPPGES GVSSLQLKGQSQTSPD K S S L K G 0 0 0 0 0 1 1 2 0 0 2 1 0 1 2 5 1 0 1 1 0 0 18 0 1882.9313 Q9UQ35 Q9UQ35 1041 1058 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 5.6842E-09 113.73 By MS/MS By MS/MS 2 2 99525000 56427000 43098000 6104 2877 6806 15368;15369;15370;15371 14044;14045;14046 14046 5999;6000;7114 3 SSTVTEAPIAVVTSR NAPTKRPRSSTVTEAP PIAVVTSRTSEVYVWG R S S S R T 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 3 3 0 0 3 0 0 15 0 1516.8097 Q8TD19 Q8TD19 331 345 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2;3 0.00041062 90.725 By MS/MS By MS/MS 4 4 42021000 21915000 20106000 6105 2379 6807 15372;15373;15374;15375;15376;15377;15378;15379 14047;14048;14049;14050;14051;14052;14053 14047 4761;4762;6970 7 SSVKTPESIVPIAPELQPSTSR ATRGRTNRSSVKTPES ELQPSTSRNQLVTPEP R S S S R N 1 1 0 0 0 1 2 0 0 2 1 1 0 0 4 5 2 0 0 2 0 0 22 1 2322.2431 Q14676 Q14676 1563 1584 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.0002388 71.297 By MS/MS By MS/MS 1 1 21902000 12498000 9404600 6106 1951 6808 15380;15381 14054;14055 14054 3781;3782 2 SSVLRVSQK SPPEVTGRSSVLRVSQ SVLRVSQKENVPPKNL R S S Q K E 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 3 0 0 0 2 0 0 9 1 1002.5822 Q9Y6A5;Q8IX09;C9JWI7;E7EMT0;C9JA91;F8WC55 Q9Y6A5 33 41 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 yes no 2 0.0085017 81.676 By MS/MS By MS/MS 1 1 9075400 4463200 4612200 6107 2944 6809 15382;15383 14056;14057;14058 14057 6117 3 SSYASQHSQLGQDLR PDSLTGLRSSYASQHS SQLGQDLRSAVSPDLH R S S L R S 1 1 0 1 0 3 0 1 1 0 2 0 0 0 0 4 0 0 1 0 0 0 15 0 1675.7914 A0A0D9SF60;Q99569 Q99569 388 402 PKP4 Plakophilin-4 no no 3 0.000114 95.822 By MS/MS By MS/MS 1 1 8164600 4412500 3752100 6108 314;2552 6810 15384;15385 14059;14060 14059 7234 2 SSYYMIGEQK LVIMDALKSSYYMIGE YYMIGEQKFSSLPLGR K S S Q K F 0 0 0 0 0 1 1 1 0 1 0 1 1 0 0 2 0 0 2 0 0 0 10 0 1204.5434 P40261 P40261 201 210 NNMT Nicotinamide N-methyltransferase yes yes 1 0.027788 46.129 By MS/MS By matching 1 1 57897000 33738000 24159000 6109 1685 6811 15386;15387 14061 14061 7599;7600 0 STAALEEDAQILK DEEFASRKSTAALEED EEDAQILKVIEAYCTS K S T L K V 3 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 13 0 1387.7195 B1ALK7;Q14155;E9PDQ5;Q15052 B1ALK7 525 537 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 yes no 2 2.8043E-07 124.48 By MS/MS By MS/MS 1 1 5189500 2995600 2193900 6110 462 6812 15388;15389 14062;14063 14063 892;6343 2 STADSGGEGLETAPK EDMADKEKSTADSGGE EGLETAPKSEEFSDLP K S T P K S 2 0 0 1 0 0 2 3 0 0 1 1 0 0 1 2 2 0 0 0 0 0 15 0 1418.6525 Q8NFC6 Q8NFC6 262 276 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.02691 52.42 By MS/MS By matching 1 1 4949900 2290500 2659400 6111 2353 6813 15390;15391 14064 14064 1 STAGDTHLGGEDFDNR EDGIFEVKSTAGDTHL GGEDFDNRMVNHFIAE K S T N R M 1 1 1 3 0 0 1 3 1 0 1 0 0 1 0 1 2 0 0 0 0 0 16 0 1690.7183 P11142;E9PKE3;E9PN89;P54652 P11142 221 236 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 0.0037564 91.355 By MS/MS By MS/MS 2 2 36240000 15168000 21072000 6112 1560 6814 15392;15393;15394;15395 14065;14066;14067 14066 3 STANQSFR SPRTLSTRSTANQSFR STANQSFRKVVKNTSG R S T F R K 1 1 1 0 0 1 0 0 0 0 0 0 0 1 0 2 1 0 0 0 0 0 8 0 909.43044 J3KRH6;Q13464 Q13464 1336 1343 ROCK1 Rho-associated protein kinase 1 no no 2 0.0064406 101.66 By MS/MS By matching 1 1 5381800 2975100 2406700 6113 1918;1239 6815 15396;15397 14068 14068 2245 1 STAQQELDGKPASPTPVIVASHTANKEEK GKDFQPSRSTAQQELD HTANKEEKQPDPWPLE R S T E K Q 4 0 1 1 0 2 3 1 1 1 1 3 0 0 3 3 3 0 0 2 0 0 29 2 3032.5415 H0YAC7;P35606 H0YAC7 61 89 COPB2 Coatomer subunit beta yes no 3;4;5 1.2931E-08 79.332 By MS/MS By MS/MS 3 3 319180000 185820000 133370000 6114 1049 6816 15398;15399;15400;15401;15402;15403 14069;14070;14071;14072;14073 14072 1952;6522 5 STDSPIIIEPLSKPDYR PASQLESRSTDSPIII PLSKPDYRNSSPQVVP R S T Y R N 0 1 0 2 0 0 1 0 0 3 1 1 0 0 3 3 1 0 1 0 0 0 17 1 1930.0048 A0A0D9SEJ8;Q86YH2 A0A0D9SEJ8 111 127 ZNF280B Zinc finger protein 280B yes no 2;3 5.159E-05 86.288 By MS/MS By MS/MS 2 2 16197000 9806400 6390600 6115 306 6817 15404;15405;15406;15407 14074;14075;14076;14077 14077 554;555;6300 4 STDSSSVSGSLQQETK RSERRKRRSTDSSSVS GSLQQETKYILPTLEK R S T T K Y 0 0 0 1 0 2 1 1 0 0 1 1 0 0 0 6 2 0 0 1 0 0 16 0 1639.7537 Q9H8G2 Q9H8G2 89 104 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 2 1.5149E-217 254.94 By MS/MS By MS/MS 1 1 60528000 32952000 27576000 6116 2679 6818 15408;15409 14078;14079 14079 5466;7054 2 STEEATSSALPEK SLPMSAGRSTEEATSS TSSALPEKPGDSEVSA R S T E K P 2 0 0 0 0 0 3 0 0 0 1 1 0 0 1 3 2 0 0 0 0 0 13 0 1348.6358 A0A0A0MSW3;P35658;E9PKD2;B7ZAV2;H0Y837 A0A0A0MSW3 921 933 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.0055927 64.711 By MS/MS By MS/MS 1 2 0 0 0 6117 226 6819 15410;15411;15412 14080;14081;14082 14082 413;414;415;6284;6285 3 STELLIR REIRRYQKSTELLIRK KSTELLIRKLPFQRLV K S T I R K 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 7 0 830.48617 K7EMV3;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431;K7EP01;Q5TEC6;Q6NXT2 K7EMV3 58 64 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2;H3F3C Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 2 0.0117 144.29 By MS/MS By MS/MS 2 2 83915000 43703000 40211000 6118 477 6820;6821 15413;15414;15415;15416 14083;14084;14085;14086 14083 907 4 STELVLSPDMPR SEKAEMKRSTELVLSP VLSPDMPRTTNESLLT R S T P R T 0 1 0 1 0 0 1 0 0 0 2 0 1 0 2 2 1 0 0 1 0 0 12 0 1343.6755 Q8TDY2 Q8TDY2 237 248 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 2 4.5335E-09 129.37 By MS/MS By MS/MS 2 1 6463300 2995100 3468300 6119 2384 6822;6823 15417;15418;15419 14087;14088;14089;14090 14089 318 4767 4 STEPELIQVK YVDRTESRSTEPELIQ EPELIQVKSELPLDPL R S T V K S 0 0 0 0 0 1 2 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1142.6183 M0QXM4;Q15758 M0QXM4 317 326 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) yes no 2 0.014063 67.214 By MS/MS By matching 1 1 6024000 2391100 3632900 6120 1298 6824 15420;15421 14091 14091 2338 1 STESLQANVQR VDPRRRNKSTESLQAN SLQANVQRLKEYRSKL K S T Q R L 1 1 1 0 0 2 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 11 0 1231.6157 P26373;J3QSB4 P26373 106 116 RPL13 60S ribosomal protein L13 yes no 2 4.4183E-06 146.23 By MS/MS By MS/MS 1 1 4256700 1615600 2641000 6121 1636 6825 15422;15423 14092;14093 14093 1 STFAGSPERESIHILSVDEK KEHLRDTKSTFAGSPE HILSVDEKNKLGAKII K S T E K N 1 1 0 1 0 0 3 1 1 2 1 1 0 1 1 4 1 0 0 1 0 0 20 1 2201.0964 H0YE03;H7C3G7;Q2TBE0 H0YE03 355 374 CWF19L2 CWF19-like protein 2 yes no 3 3.5755E-08 87.419 By MS/MS By MS/MS 1 1 28373000 12623000 15750000 6122 1066 6826 15424;15425 14094;14095;14096 14094 1969 3 STFREESPLR KNLDAREKSTFREESP FREESPLRIKMIASDS K S T L R I 0 2 0 0 0 0 2 0 0 0 1 0 0 1 1 2 1 0 0 0 0 0 10 1 1220.6149 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 525 534 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0015466 105.36 By MS/MS By matching 1 1 1200200000 622230000 578020000 6123 2759 6827 15426;15427 14097 14097 5660 1 STFREESPLRIK KNLDAREKSTFREESP EESPLRIKMIASDSHR K S T I K M 0 2 0 0 0 0 2 0 0 1 1 1 0 1 1 2 1 0 0 0 0 0 12 2 1461.794 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 525 536 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0048559 72.209 By MS/MS By MS/MS 1 1 485030000 237500000 247530000 6124 2759 6828 15428;15429 14098;14099 14099 5660 2 STFSLPEEEEEPEPLVFAEQPSVK SESSMSLRSTFSLPEE FAEQPSVKLCCQLCCS R S T V K L 1 0 0 0 0 1 7 0 0 0 2 1 0 2 4 3 1 0 0 2 0 0 24 0 2717.296 H3BR17;Q6Q0C0 H3BR17 105 128 TRAF7 E3 ubiquitin-protein ligase TRAF7 yes no 3 9.3436E-05 71.265 By MS/MS By MS/MS 1 1 22867000 11464000 11404000 6125 1134 6829 15430;15431 14100;14101 14100 2069;6542 2 STFSPISDIGLAK PVNSSKWKSTFSPISD ISDIGLAKSADSPLQA K S T A K S 1 0 0 1 0 0 0 1 0 2 1 1 0 1 1 3 1 0 0 0 0 0 13 0 1334.7082 Q8TEK3;H7C2S2 Q8TEK3 1243 1255 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes no 2 0.0041764 75.669 By MS/MS By matching 1 1 6825100 4233100 2592000 6126 2388 6830 15432;15433 14102 14102 4777 1 STFVLDEFKR DPFAHLPKSTFVLDEF FVLDEFKRKYSNEDTL K S T K R K 0 1 0 1 0 0 1 0 0 0 1 1 0 2 0 1 1 0 0 1 0 0 10 1 1240.6452 P26641 P26641 286 295 EEF1G Elongation factor 1-gamma yes yes 2;3 0.0011467 89.886 By MS/MS 2 918540 0 918540 6127 1637 6831 15434;15435 14103;14104 14104 2 STGEAFVQFASQEIAEK LPVDFQGRSTGEAFVQ ASQEIAEKALKKHKER R S T E K A 3 0 0 0 0 2 3 1 0 1 0 1 0 2 0 2 1 0 0 1 0 0 17 0 1840.8843 E9PCY7;G8JLB6;P55795;P31943;E5RGH4;E5RGV0;D6RIU0;D6RBM0;H0YB39;E7EN40 E9PCY7 151 167 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 2 5.307E-05 94.538 By MS/MS By matching 1 1 5877700 3632600 2245100 6128 767 6832 15436;15437 14105 14105 1 STGSATSLASQGER SESGMTVRSTGSATSL SLASQGERRRRTLPQL R S T E R R 2 1 0 0 0 1 1 2 0 0 1 0 0 0 0 4 2 0 0 0 0 0 14 0 1350.6375 H0Y2V6;Q5SW79 H0Y2V6 591 604 CEP170 Centrosomal protein of 170 kDa yes no 2 3.0855E-27 170.42 By MS/MS By MS/MS 1 1 17144000 9537000 7607000 6129 1006 6833 15438;15439 14106;14107 14106 1852 2 STGSLLTPTR FDVMKKGKSTGSLLTP GSLLTPTRGESEKQEP K S T T R G 0 1 0 0 0 0 0 1 0 0 2 0 0 0 1 2 3 0 0 0 0 0 10 0 1031.5611 Q5T5U3;A0A087WW76 Q5T5U3 1741 1750 ARHGAP21 Rho GTPase-activating protein 21 yes no 2 0.016813 65.695 By MS/MS 1 795640 795640 0 6130 2098 6834 15440 14108 14108 4152 1 STGVVNIPAAECLDEYEDDEAGQKER RKLREKRRSTGVVNIP DEAGQKERKREDAITQ R S T E R K 3 1 1 3 1 1 5 2 0 1 1 1 0 0 1 1 1 0 1 2 0 0 26 1 2894.2876 Q96IZ0;H0YI16 Q96IZ0 162 187 PAWR PRKC apoptosis WT1 regulator protein yes no 3 4.0045E-24 111.6 By MS/MS By MS/MS 1 1 41147000 23283000 17864000 6131 2503 6835 15441;15442 14109;14110 14110 7845 2 STIGVMVTASHNPEEDNGVK VLRSKQTKSTIGVMVT PEEDNGVKLVDPLGEM K S T V K L 1 0 2 1 0 0 2 2 1 1 0 1 1 0 1 2 2 0 0 3 0 0 20 0 2083.9844 D6RC77;D6RCQ8;D6RF77;O95394 D6RC77 83 102 PGM3 Phosphoacetylglucosamine mutase yes no 3 0.0053722 58.427 By MS/MS 1 5377500 5377500 0 6132 664 6836 15443 14111 14111 6392 1 STILGFVSNFGQVPKQLFTK SITDPLIKSTILGFVS VPKQLFTKPHPARTAA K S T T K P 0 0 1 0 0 2 0 2 0 1 2 2 0 3 1 2 2 0 0 2 0 0 20 1 2210.2099 H3BLT2;Q6ZS81 H3BLT2 884 903 WDFY4 WD repeat- and FYVE domain-containing protein 4 yes no 3 0.010276 43.454 By MS/MS By matching 1 1 4524700 2727400 1797200 6133 1108 6837 15444;15445 14112 14112 2034;2035;6535;6536 1 STLAMSPR RIPNPHLKSTLAMSPR STLAMSPRQRKKMTRI K S T P R Q 1 1 0 0 0 0 0 0 0 0 1 0 1 0 1 2 1 0 0 0 0 0 8 0 861.43784 H0YIU4;Q13522 H0YIU4 33 40 PPP1R1A Protein phosphatase 1 regulatory subunit 1A yes no 2 0.0080841 93.556 By MS/MS By MS/MS 1 1 8605100 4951800 3653200 6134 1078 6838 15446;15447 14113;14114 14114 1991 2 STLEEPNLQPLQR GRSRGIERSTLEEPNL PNLQPLQRRRSVPVLR R S T Q R R 0 1 1 0 0 2 2 0 0 0 3 0 0 0 2 1 1 0 0 0 0 0 13 0 1523.7944 Q76M96 Q76M96 64 76 CCDC80 Coiled-coil domain-containing protein 80 yes yes 2 0.027731 48.532 By MS/MS 1 654500 654500 0 6135 2195 6839 15448 14115 14115 0 STLNPQWNESFTFK KQKTKTIRSTLNPQWN WNESFTFKLKPSDKDR R S T F K L 0 0 2 0 0 1 1 0 0 0 1 1 0 2 1 2 2 1 0 0 0 0 14 0 1697.8049 P17252;J3KRN5 P17252 217 230 PRKCA Protein kinase C alpha type yes no 2 1.6981E-20 156.6 By MS/MS By MS/MS 1 1 13612000 9199100 4412500 6136 1593 6840 15449;15450 14116;14117 14116 2923 2 STLTSSYNCPSPYADGR PDPALTTKSTLTSSYN PSPYADGRLYQPYGDS K S T G R L 1 1 1 1 1 0 0 1 0 0 1 0 0 0 2 4 2 0 2 0 0 0 17 0 1874.8105 Q9HCU4 Q9HCU4 2638 2654 CELSR2 Cadherin EGF LAG seven-pass G-type receptor 2 yes yes 2 0.0062724 57.106 By MS/MS By matching 1 1 5813800 3038300 2775500 6137 2698 6841 15451;15452 14118 14118 7899 1 STPATMPISAGELETLKQSSR LFVTWQQRSTPATMPI ETLKQSSRLVHYCATA R S T S R L 2 1 0 0 0 1 2 1 0 1 2 1 1 0 2 4 3 0 0 0 0 0 21 1 2203.1154 Q5T011 Q5T011 2825 2845 SZT2 Protein SZT2 yes yes 3 0.0191 46.159 By MS/MS 1 2639400 0 2639400 6138 2091 6842 15453 14119 14119 4128;4129 0 STPFIVPSSPTEQEGR APSPDAFRSTPFIVPS SPTEQEGRQDKPMDTS R S T G R Q 0 1 0 0 0 1 2 1 0 1 0 0 0 1 3 3 2 0 0 1 0 0 16 0 1730.8475 Q12888;A6NNK5;C9JXV0 Q12888 372 387 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.00011112 106.6 By MS/MS By MS/MS 1 1 160460000 89601000 70854000 6139 1882 6843 15454;15455 14120;14121 14121 3585 2 STPLASPSPSPGR SILRSTLRSTPLASPS SPSPSPGRSPQRLKET R S T G R S 1 1 0 0 0 0 0 1 0 0 1 0 0 0 4 4 1 0 0 0 0 0 13 0 1252.6412 Q8WYP5 Q8WYP5 1209 1221 AHCTF1 Protein ELYS yes yes 2 0.014015 62.378 By matching By MS/MS 1 1 9936900 5017100 4919800 6140 2417 6844 15456;15457 14122 14122 4856 1 STPSHGSVSSLNSTGSLSPK PPPKDSLRSTPSHGSV STGSLSPKHSLKQTQP R S T P K H 0 0 1 0 0 0 0 2 1 0 2 1 0 0 2 8 2 0 0 1 0 0 20 0 1928.9439 M0R165;Q9UBC2;M0R2S2 M0R165 238 257 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 2;3 0.0017338 63.462 By MS/MS By MS/MS 3 3 109270000 64574000 44698000 6141 1319 6845;6846 15458;15459;15460;15461;15462;15463 14123;14124;14125 14125 2375;2376;2377 3 STQALHNTNLTREVR TPKNEVHKSTQALHNT TNLTREVRPLSASQPS K S T V R P 1 2 2 0 0 1 1 0 1 0 2 0 0 0 0 1 3 0 0 1 0 0 15 1 1738.9074 O60741 O60741 770 784 HCN1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 yes yes 3 0.017949 56.121 By MS/MS 1 0 0 0 6142 1418 6847 15464 14126 14126 2608 1 STQESLTAGGTDLKR PATRVTRRSTQESLTA AGGTDLKRELHPPATS R S T K R E 1 1 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 15 1 1562.79 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 304 318 LRRC41 Leucine-rich repeat-containing protein 41 yes no 2 0.0033204 79.471 By MS/MS By matching 1 1 26466000 12583000 13883000 6143 33 6848 15465;15466 14127 14127 62;6223 1 STQIENQHQGAQDTSDLMSPSKR FYINYVTRSTQIENQH DLMSPSKRSSQKYIIE R S T K R S 1 1 1 2 0 4 1 1 1 1 1 1 1 0 1 4 2 0 0 0 0 0 23 1 2557.1827 H0YBW3;Q9NVR2 H0YBW3 10 32 INTS10 Integrator complex subunit 10 yes no 3 8.9962E-05 71.001 By MS/MS By MS/MS 1 1 21442000 10039000 11402000 6144 1055 6849 15467;15468 14128;14129 14129 1960 2 STQLLQAAAAEASLNK VFGVPASKSTQLLQAA AAEASLNKSKSATTTP K S T N K S 5 0 1 0 0 2 1 0 0 0 3 1 0 0 0 2 1 0 0 0 0 0 16 0 1614.8577 Q2M2I8 Q2M2I8 652 667 AAK1 AP2-associated protein kinase 1 yes yes 2 0.00025109 88.133 By MS/MS By MS/MS 1 1 4303900 2178700 2125200 6145 2030 6850 15469;15470 14130;14131;14132 14130 3967;6851 3 STRSVENLPECGITHEQR RIPENRIRSTRSVENL CGITHEQRAGSFSTVP R S T Q R A 0 2 1 0 1 1 3 1 1 1 1 0 0 0 1 2 2 0 0 1 0 0 18 1 2112.0018 A0A0B4J1S8;Q9UBF8;F8W860 A0A0B4J1S8 437 454 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 1.2257E-13 124.45 By MS/MS By MS/MS 1 1 64703000 34295000 30408000 6146 257 6851 15471;15472 14133;14134 14133 465;466;6295 2 STSAPQMSPGSSDNQSSSPQPAQQK PSSPLPSKSTSAPQMS SPQPAQQKLKQQKKKA K S T Q K L 2 0 1 1 0 5 0 1 0 0 0 1 1 0 4 8 1 0 0 0 0 0 25 0 2531.1194 F8W726;Q14157 F8W726 471 495 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 6.2254E-20 112.75 By MS/MS By MS/MS 4 3 324870000 194390000 130490000 6147 937 6852;6853 15473;15474;15475;15476;15477;15478;15479 14135;14136;14137;14138;14139 14139 106 1690;1691;1692;1693;1694;1695;1696;6478 5 STSAPQMSPGSSDNQSSSPQPAQQKLK PSSPLPSKSTSAPQMS QPAQQKLKQQKKKASL K S T L K Q 2 0 1 1 0 5 0 1 0 0 1 2 1 0 4 8 1 0 0 0 0 0 27 1 2772.2984 F8W726;Q14157 F8W726 471 497 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.0017002 53.304 By MS/MS 1 4503400 0 4503400 6148 937 6854 15480 14140 14140 1690;1691;1692;1693;1694;1695;1696;6478 1 STSATDTHHVEMAR PALALRARSTSATDTH THHVEMARERSKTVTS R S T A R E 2 1 0 1 0 0 1 0 2 0 0 0 1 0 0 2 3 0 0 1 0 0 14 0 1541.6893 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874 H3BQP2 31 44 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes no 2;3 0.00064668 85.473 By MS/MS By MS/MS 2 2 79536000 44768000 34768000 6149 1120 6855 15481;15482;15483;15484 14141;14142;14143 14143 2046;2047;6539 3 STSFGVPNANSIK GPRAAVQRSTSFGVPN VPNANSIKQMLLDWCR R S T I K Q 1 0 2 0 0 0 0 1 0 1 0 1 0 1 1 3 1 0 0 1 0 0 13 0 1320.6674 A0A087WVP4;A0A087X1R1;P53814;H7BZZ8;A0A096LNK9;B5MCI0 A0A087WVP4 846 858 SMTN Smoothelin yes no 2 0.0075897 66.989 By MS/MS By matching 1 1 4993900 2765900 2228000 6150 63 6856 15485;15486 14144 14144 111 1 STSGPRPGCQPSSPCVPK ATYNQLSRSTSGPRPG PSSPCVPKLSNSDSQD R S T P K L 0 1 0 0 2 1 0 2 0 0 0 1 0 0 5 4 1 0 0 1 0 0 18 1 1897.8775 O14545 O14545 468 485 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 3 0.00015481 76.678 By MS/MS By MS/MS 1 1 33009000 17594000 15415000 6151 1340 6857 15487;15488 14145;14146 14145 2429 2 STSHTSDFNPNSGSDQR GSGSMPSRSTSHTSDF PNSGSDQRVVNGGVPW R S T Q R V 0 1 2 2 0 1 0 1 1 0 0 0 0 1 1 5 2 0 0 0 0 0 17 0 1835.767 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700 H0YH87 449 465 ATXN2 Ataxin-2 no no 2 0.019568 52.112 By matching By MS/MS 1 1 6392900 2862400 3530600 6152 912 6858 15489;15490 14147 14147 1642;1643 1 STSLSALVR PSRTHKERSTSLSALV TSLSALVRSSPHGSLG R S T V R S 1 1 0 0 0 0 0 0 0 0 2 0 0 0 0 3 1 0 0 1 0 0 9 0 932.5291 X6R5W5;X6RAE7;R4GNB2;R4GN35;Q5VZ89;A0A0A0MRX3 X6R5W5 110 118 DENND4C DENN domain-containing protein 4C yes no 2 0.0043868 105.4 By matching By MS/MS 1 1 73312000 37845000 35467000 6153 2123 6859 15491;15492 14148 14148 4218 1 STSMDSGSSESPASLK LISGPIRKSTSMDSGS SESPASLKRVASPAAK K S T L K R 1 0 0 1 0 0 1 1 0 0 1 1 1 0 1 7 1 0 0 0 0 0 16 0 1569.6828 F8W7U0;Q15811;H0Y7J7 F8W7U0 976 991 ITSN1 Intersectin-1 yes no 2 3.236E-06 114.24 By MS/MS By MS/MS 1 1 6596900 3385900 3211000 6154 939 6860 15493;15494 14149;14150 14150 1700;1701;1702;6479 1 STSMDSGSSESPASLKR LISGPIRKSTSMDSGS ESPASLKRVASPAAKP K S T K R V 1 1 0 1 0 0 1 1 0 0 1 1 1 0 1 7 1 0 0 0 0 0 17 1 1725.7839 F8W7U0;Q15811;H0Y7J7 F8W7U0 976 992 ITSN1 Intersectin-1 yes no 2;3 5.9158E-06 102.07 By MS/MS By MS/MS 4 4 44908000 27221000 17688000 6155 939 6861 15495;15496;15497;15498;15499;15500;15501;15502 14151;14152;14153;14154;14155 14154 1700;1701;1702;6479 5 STSPFGIPEEASEMLEAKPK LFHGVGFRSTSPFGIP EMLEAKPKNLELSPEG R S T P K N 2 0 0 0 0 0 4 1 0 1 1 2 1 1 3 3 1 0 0 0 0 0 20 1 2147.0456 Q96D09 Q96D09 510 529 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 3 1.0045E-05 82.709 By MS/MS By matching 1 1 54812000 36514000 18298000 6156 2470 6862 15503;15504 14156 14156 4975 1 STSPIIGSPPVR SERALPRRSTSPIIGS IIGSPPVRAVPIGTPP R S T V R A 0 1 0 0 0 0 0 1 0 2 0 0 0 0 3 3 1 0 0 1 0 0 12 0 1209.6717 Q86TB9 Q86TB9 177 188 PATL1 Protein PAT1 homolog 1 yes yes 2 0.00013026 114.51 By MS/MS By MS/MS 2 2 79734000 40101000 39633000 6157 2229 6863;6864 15505;15506;15507;15508 14157;14158;14159;14160 14158 4467;4468;4469;6938 4 STSPTLTPSPSPK SGTSTTSKSTSPTLTP LTPSPSPKGHTAESSV K S T P K G 0 0 0 0 0 0 0 0 0 0 1 1 0 0 4 4 3 0 0 0 0 0 13 0 1298.6718 H7C163;A0A0A0MRS7;Q68DC2 H7C163 202 214 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 yes no 2 0.0146 61.958 By matching By MS/MS 1 1 14257000 7830200 6427000 6158 199 6865 15509;15510 14161 14161 362 1 STSPVTDPSIPIR IRKTKGNRSTSPVTDP TDPSIPIRKKSKDGKG R S T I R K 0 1 0 1 0 0 0 0 0 2 0 0 0 0 3 3 2 0 0 1 0 0 13 0 1368.7249 A0A087WU18;Q99607 A0A087WU18 186 198 ELF4 ETS-related transcription factor Elf-4 yes no 2 0.0066445 67.997 By matching By MS/MS 1 1 15691000 9068800 6622600 6159 38 6866 15511;15512 14162 14162 68 1 STSQGSINSPVYSR VRDRMIHRSTSQGSIN INSPVYSRHSYTPTTS R S T S R H 0 1 1 0 0 1 0 1 0 1 0 0 0 0 1 5 1 0 1 1 0 0 14 0 1481.711 J3QSX6;F8W8M4;A0A0A0MRL6;O14639;H0Y7N6;F6XFR5 J3QSX6 108 121 ABLIM1 Actin-binding LIM protein 1 yes no 2 8.596E-05 112.94 By MS/MS By MS/MS 1 2 72017000 39113000 32904000 6160 189 6867 15513;15514;15515 14163;14164;14165 14163 337;7200 3 STSQSIVSLLTGTAGEDEKSASPR LESRRRPRSTSQSIVS DEKSASPRSNVALPAN R S T P R S 2 1 0 1 0 1 2 2 0 1 2 1 0 0 1 6 3 0 0 1 0 0 24 1 2420.2031 V9GZ20;V9GXZ5;Q70EL4 V9GZ20 369 392 USP43 Ubiquitin carboxyl-terminal hydrolase 43 yes no 3 3.1899E-06 80.156 By MS/MS 1 3263200 0 3263200 6161 2192 6868 15516 14166 14166 4365 1 STSTLYSQFQTAESENR GSRQAARRSTSTLYSQ QTAESENRSYEGTLYK R S T N R S 1 1 1 0 0 2 2 0 0 0 1 0 0 1 0 4 3 0 1 0 0 0 17 0 1947.881 G5E933;O95248;H0Y5W8 G5E933 1747 1763 SBF1 Myotubularin-related protein 5 yes no 2 2.0562E-16 135.61 By MS/MS By MS/MS 2 2 26554000 12369000 14185000 6162 988 6869 15517;15518;15519;15520 14167;14168;14169;14170 14167 1802;1803;6494;6495;7426 4 STSTPNVHMVSTTLPVDSR GSLSQRQRSTSTPNVH TTLPVDSRMIEDAIRS R S T S R M 0 1 1 1 0 0 0 0 1 0 1 0 1 0 2 4 4 0 0 3 0 0 19 0 2027.9946 H7C155;P04049 H7C155 136 154 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 2;3 1.8765E-06 87.05 By MS/MS By MS/MS 3 3 112190000 69147000 43039000 6163 1167 6870;6871 15521;15522;15523;15524;15525;15526 14171;14172;14173;14174;14175;14176 14172 137 2121;6548 6 STSTPTSPGPR KPLLSVNKSTSTPTSP TPTSPGPRTHSTPSIP K S T P R T 0 1 0 0 0 0 0 1 0 0 0 0 0 0 3 3 3 0 0 0 0 0 11 0 1086.5306 Q8WWM7;H3BUF6;H3BRB0;A0A0C4DGL7 Q8WWM7 678 688 ATXN2L Ataxin-2-like protein yes no 2 0.00018619 111.86 By MS/MS By MS/MS 2 1 92257000 57804000 34453000 6164 2409 6872 15527;15528;15529 14177;14178;14179;14180;14181;14182 14177 4829 6 STSYQELSEELVQVVENSELADEQDKETVR ________________ EQDKETVRVQGPGILP R S T V R V 1 1 1 2 0 3 7 0 0 0 3 1 0 0 0 4 2 0 1 4 0 0 30 1 3453.6271 Q9H813 Q9H813 7 36 TMEM206 Transmembrane protein 206 yes yes 3 0.00026758 59.434 By MS/MS 1 25202000 25202000 0 6165 2678 6873 15530 14183;14184 14184 5465 2 STTNYVDFYSTK YSTQYGLKSTTNYVDF YVDFYSTKRPSYRAEQ K S T T K R 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 2 3 0 2 1 0 0 12 0 1424.646 A0A0D9SF60;Q99569 Q99569 1162 1173 PKP4 Plakophilin-4 no no 2 0.00079496 82.494 By MS/MS By MS/MS 2 2 20171000 10648000 9522300 6166 314;2552 6874;6875 15531;15532;15533;15534 14185;14186;14187 14185 7235;7236 3 STTPPPAEPVSLPQEPPK NLEELEEKSTTPPPAE SLPQEPPKAFSWASVT K S T P K A 1 0 0 0 0 1 2 0 0 0 1 1 0 0 7 2 2 0 0 1 0 0 18 0 1870.9676 Q9UN86 Q9UN86 225 242 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 2 0.022908 62.813 By MS/MS By matching 1 1 10092000 4574400 5517700 6167 2862 6876 15535;15536 14188 14188 5899 1 STTSVSEEDVSSR RTVSGRYKSTTSVSEE SEEDVSSRYSRTDRSG K S T S R Y 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 5 2 0 0 2 0 0 13 0 1382.6161 Q96IZ0 Q96IZ0 228 240 PAWR PRKC apoptosis WT1 regulator protein yes yes 2 1.966E-10 136.33 By MS/MS By MS/MS 1 1 11375000 6180500 5194200 6168 2503 6877 15537;15538 14189;14190 14189 5038;5039 2 STTTGHLIYK IGHVDSGKSTTTGHLI TTGHLIYKCGGIDKRT K S T Y K C 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 1 3 0 1 0 0 0 10 0 1119.5924 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01;Q05639;A6PW80;Q5JR01 P68104 21 30 EEF1A1;EEF1A1P5;EEF1A2 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha;Elongation factor 1-alpha 2 yes no 2;3 5.7009E-05 116.05 By MS/MS By MS/MS 2 2 11526000 5968600 5557600 6169 1809 6878 15539;15540;15541;15542 14191;14192;14193 14193 3 STVLTPMFVETQASQGTLQTR IDSDWRFRSTVLTPMF SQGTLQTRTQEGSLSA R S T T R T 1 1 0 0 0 3 1 1 0 0 2 0 1 1 1 2 5 0 0 2 0 0 21 0 2294.1576 P78527 P78527 2599 2619 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 3.1826E-08 90.22 By MS/MS By MS/MS 3 3 37943000 21344000 16599000 6170 1816 6879;6880 15543;15544;15545;15546;15547;15548 14194;14195;14196;14197;14198 14195 233 3391;6755;6756 4 STVSETFMSKPSIAK SNSMESVKSTVSETFM MSKPSIAKRRANQQET K S T A K R 1 0 0 0 0 0 1 0 0 1 0 2 1 1 1 4 2 0 0 1 0 0 15 1 1611.8178 B7ZM87;A2RUF3;O75044;E9PDX4;A0A087X0L1;A0A087WW56;Q5VZB4;A0A075B7B5;P0DMP2;P0DJJ0 B7ZM87 423 437 SRGAP2;SRGAP2C;SRGAP2B SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B;SLIT-ROBO Rho GTPase-activating protein 2C yes no 2 7.2291E-06 115.1 By MS/MS By MS/MS 1 1 9173000 4562000 4611100 6171 402 6881 15549;15550 14199;14200 14199 769 2 STVTGERQSGDGQESTEPVENK GEEKPDTKSTVTGERQ STEPVENKVGKKGPKH K S T N K V 0 1 1 1 0 2 4 3 0 0 0 1 0 0 1 3 3 0 0 2 0 0 22 1 2334.0571 J3KSY7;O15234 J3KSY7 27 48 CASC3 Protein CASC3 yes no 3 0.028754 40.996 By MS/MS By matching 2 1 78801000 49020000 29781000 6172 1244 6882 15551;15552;15553 14201 14201 2253;2254 1 STVTGERQSGDGQESTEPVENKVGK GEEKPDTKSTVTGERQ PVENKVGKKGPKHLDD K S T G K K 0 1 1 1 0 2 4 4 0 0 0 2 0 0 1 3 3 0 0 3 0 0 25 2 2618.242 J3KSY7;O15234 J3KSY7 27 51 CASC3 Protein CASC3 yes no 3 0.0010681 57.896 By MS/MS By MS/MS 1 1 32643000 17205000 15438000 6173 1244 6883 15554;15555 14202;14203 14202 2253;2254 2 STWSQLSAVK VIHHKPLRSTWSQLSA WSQLSAVKRKGLSQTV R S T V K R 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 3 1 1 0 1 0 0 10 0 1105.5768 Q96DR7 Q96DR7 416 425 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 0.015778 66.267 By MS/MS By MS/MS 2 2 5624500 2653000 2971400 6174 2474 6884;6885 15556;15557;15558;15559 14204;14205 14204 4984 2 STYFSDEEELSD SRRPRIKKSTYFSDEE SDEEELSD________ K S T S D - 0 0 0 2 0 0 3 0 0 0 1 0 0 1 0 3 1 0 1 0 0 0 12 0 1420.5518 G3V1V1;Q8TBF4 G3V1V1 165 176 ZCRB1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 yes no 2 0.0054332 127.56 By MS/MS 1 0 0 0 6175 963 6886 15560 14206 14206 1755;1756 1 STYTSYPK ________________ STYTSYPKAEPMPSAS K S T P K A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 2 2 0 2 0 0 0 8 0 945.44436 I3L1E3;O14964 I3L1E3 4 11 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 2 0.0027968 116.9 By MS/MS By MS/MS 1 2 8596100 4534300 4061800 6176 1200 6887 15561;15562;15563 14207;14208;14209 14208 7472 3 SVAAEGALLPQTPPSPR ASPQSGRKSVAAEGAL PQTPPSPRNLIPHGHR K S V P R N 3 1 0 0 0 1 1 1 0 0 2 0 0 0 4 2 1 0 0 1 0 0 17 0 1689.905 Q86X27;H7C2H2 Q86X27 315 331 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes no 2 2.776E-15 130.47 By MS/MS By MS/MS 3 3 34458000 17603000 16855000 6177 2249 6888;6889 15564;15565;15566;15567;15568;15569 14210;14211;14212;14213;14214;14215 14210 4507;4508;6945 6 SVAGLTMTYDGNNPVTSHR FFILCENKSVAGLTMT NNPVTSHRDVPLSYCN K S V H R D 1 1 2 1 0 0 0 2 1 0 1 0 1 0 1 2 3 0 1 2 0 0 19 0 2018.948 Q9Y6L6 Q9Y6L6 434 452 SLCO1B1 Solute carrier organic anion transporter family member 1B1 yes yes 2 0.015961 40.52 By MS/MS By matching 1 1 10249000 5803200 4445500 6178 2950 6890 15570;15571 14216 14216 389 6129;7964 1 SVASLNRSPER VTKLNNSKSVASLNRS SLNRSPERRKHESDSS K S V E R R 1 2 1 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 11 1 1214.6367 Q12923 Q12923 1026 1036 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.012323 70.622 By MS/MS 1 3632500 0 3632500 6179 1885 6891 15572 14217 14217 3595 1 SVASNQSEMEFSSLQDMPK KLEDSEVRSVASNQSE SSLQDMPKELDPSAVL R S V P K E 1 0 1 1 0 2 2 0 0 0 1 1 2 1 1 5 0 0 0 1 0 0 19 0 2113.9296 Q8N163;A0A087X2B6;G3V119;H0YB24 Q8N163 675 693 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 2;3 7.9968E-06 84.566 By MS/MS By MS/MS 6 6 98876000 49739000 49136000 6180 2297 6892;6893;6894;6895 15573;15574;15575;15576;15577;15578;15579;15580;15581;15582;15583;15584 14218;14219;14220;14221;14222;14223;14224;14225;14226 14223 309;310 4611;4612;4613 9 SVATGPMTPQAAAPPAFPEVR SLGAAETRSVATGPMT PPAFPEVRVRPGSALA R S V V R V 5 1 0 0 0 1 1 1 0 0 0 0 1 1 5 1 2 0 0 2 0 0 21 0 2094.0568 Q7Z2K8 Q7Z2K8 870 890 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 2;3 0.00042125 73.649 By MS/MS By MS/MS 3 3 19348000 10631000 8716400 6181 2206 6896;6897 15585;15586;15587;15588;15589;15590 14227;14228;14229;14230 14230 298 6931;6932 3 SVAVSDEEEVEEEAER PATPSRKRSVAVSDEE EVEEEAERRKERCKRG R S V E R R 2 1 0 1 0 0 7 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 16 0 1805.7803 Q9Y6X9 Q9Y6X9 739 754 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 6.5244E-21 144.29 By MS/MS By MS/MS 2 2 22927000 11824000 11103000 6182 2955 6898;6899 15591;15592;15593;15594 14231;14232;14233 14231 6139;6140 3 SVDAIGGESMPIPTIDTSR TAEERKRKSVDAIGGE IPTIDTSRKKRLPSKE K S V S R K 1 1 0 2 0 0 1 2 0 3 0 0 1 0 2 3 2 0 0 1 0 0 19 0 1944.9463 Q9BWT3 Q9BWT3 684 702 PAPOLG Poly(A) polymerase gamma yes yes 2 0.0022383 68.187 By MS/MS By MS/MS 1 1 5944600 3255900 2688700 6183 2593 6900 15595;15596 14234;14235;14236 14236 5251 3 SVDALDDLTPPSTAESGSR RARRPRARSVDALDDL STAESGSRSPTSNGGR R S V S R S 2 1 0 3 0 0 1 1 0 0 2 0 0 0 2 4 2 0 0 1 0 0 19 0 1916.8963 S4R3V8;Q86X29 S4R3V8 445 463 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.00117 72.433 By MS/MS By matching 1 1 5580000 2714300 2865700 6184 2250 6901 15597;15598 14237 14237 4514 1 SVDALDDLTPPSTAESGSRSPTSNGGR RARRPRARSVDALDDL SPTSNGGRSRAYMPPR R S V G R S 2 2 1 3 0 0 1 3 0 0 2 0 0 0 3 6 3 0 0 1 0 0 27 1 2673.2478 S4R3V8;Q86X29 S4R3V8 445 471 LSR Lipolysis-stimulated lipoprotein receptor yes no 3 0.014845 42.863 By MS/MS By matching 1 1 10241000 5046100 5194800 6185 2250 6902 15599;15600 14238 14238 4514;4515 1 SVDAYDSYWESR PRVTKPSRSVDAYDSY YDSYWESRKPPLKASL R S V S R K 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 3 0 1 2 1 0 0 12 0 1476.6157 Q9UM82 Q9UM82 253 264 SPATA2 Spermatogenesis-associated protein 2 yes yes 2 0.00068405 106.17 By MS/MS By MS/MS 1 1 14503000 9047700 5455500 6186 2856 6903 15601;15602 14239;14240 14240 5882 2 SVDFDSLTVR EQLPLRPKSVDFDSLT DFDSLTVRTSKETDVV K S V V R T 0 1 0 2 0 0 0 0 0 0 1 0 0 1 0 2 1 0 0 2 0 0 10 0 1137.5666 Q9Y5K6 Q9Y5K6 458 467 CD2AP CD2-associated protein yes yes 2 0.0067357 74.962 By MS/MS By matching 1 1 3059400 2085100 974200 6187 2931 6904 15603;15604 14241 14241 6092 1 SVDGGLMVK QDHALAKRSVDGGLMV VDGGLMVKGPRHKPGI R S V V K G 0 0 0 1 0 0 0 2 0 0 1 1 1 0 0 1 0 0 0 2 0 0 9 0 904.4688 A8MQ02;J3KN01;P55196;Q5TIG5;H0Y7R8 A8MQ02 471 479 MLLT4 Afadin yes no 2 0.0047541 86.882 By MS/MS By MS/MS 1 1 1998200 1122900 875270 6188 431 6905 15605;15606 14242;14243 14243 819 2 SVDISLGDSPRR VKPPDQRRSVDISLGD SLGDSPRRARGHAVKN R S V R R A 0 2 0 2 0 0 0 1 0 1 1 0 0 0 1 3 0 0 0 1 0 0 12 1 1300.6735 H0YDE2;A0A1B0GTN9;E9PKC0;Q6IQ23 H0YDE2 235 246 PLEKHA7 Pleckstrin homology domain-containing family A member 7 yes no 2 0.003017 97.273 By MS/MS By MS/MS 1 1 8097100 5415700 2681400 6189 365 6906 15607;15608 14244;14245 14244 680 2 SVEDVRPHHTDANNQSACFEAPDQK QVQKFLSRSVEDVRPH CFEAPDQKTLSAPQEE R S V Q K T 3 1 2 3 1 2 2 0 2 0 0 1 0 1 2 2 1 0 0 2 0 0 25 1 2851.258 E7EPN9;Q9Y520 E7EPN9 880 904 PRRC2C Protein PRRC2C yes no 3;4 0.003044 50.837 By matching By MS/MS 2 2 31670000 18442000 13228000 6190 715 6907 15609;15610;15611;15612 14246;14247 14247 1273 2 SVELDLNQAHMEETPK ISPERRCRSVELDLNQ AHMEETPKRKGAKVFG R S V P K R 1 0 1 1 0 1 3 0 1 0 2 1 1 0 1 1 1 0 0 1 0 0 16 0 1839.8673 Q14680 Q14680 505 520 MELK Maternal embryonic leucine zipper kinase yes yes 2 0.00049296 83.37 By MS/MS By matching 1 1 9539800 6301600 3238200 6191 1954 6908 15613;15614 14248 14248 3786 1 SVELDLNQAHMEETPKR ISPERRCRSVELDLNQ HMEETPKRKGAKVFGS R S V K R K 1 1 1 1 0 1 3 0 1 0 2 1 1 0 1 1 1 0 0 1 0 0 17 1 1995.9684 Q14680 Q14680 505 521 MELK Maternal embryonic leucine zipper kinase yes yes 3 0.0091719 48.376 By MS/MS 1 2475500 2475500 0 6192 1954 6909 15615 14249 14249 3786 1 SVEMHHEALSEALPGDNVGFNVK VNVTTEVKSVEMHHEA DNVGFNVKNVSVKDVR K S V V K N 2 0 2 1 0 0 3 2 2 0 2 1 1 1 1 2 0 0 0 3 0 0 23 0 2479.1802 P68104;A0A087WVQ9;A0A087WV01;Q05639 P68104 291 313 EEF1A1;EEF1A2 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 yes no 4 0.0079789 43.328 By MS/MS By matching 1 1 3568300 1934700 1633600 6193 1809 6910 15616;15617 14250 14250 1 SVENLPECGITHEQR ENRIRSTRSVENLPEC CGITHEQRAGSFSTVP R S V Q R A 0 1 1 0 1 1 3 1 1 1 1 0 0 0 1 1 1 0 0 1 0 0 15 0 1767.821 A0A0B4J1S8;Q9UBF8;F8W860 A0A0B4J1S8 440 454 PI4KB Phosphatidylinositol 4-kinase beta yes no 2;3 7.7578E-15 134.14 By MS/MS By MS/MS 2 2 188910000 96573000 92342000 6194 257 6911 15618;15619;15620;15621 14251;14252;14253;14254 14251 466 4 SVEPQDAGPLER VDEGPQPRSVEPQDAG QDAGPLERSQGDEAGG R S V E R S 1 1 0 1 0 1 2 1 0 0 1 0 0 0 2 1 0 0 0 1 0 0 12 0 1296.631 A0A0A0MRN5;Q9NZT2 A0A0A0MRN5 297 308 OGFR Opioid growth factor receptor yes no 2 0.0098227 82.705 By matching By MS/MS 1 1 6822100 4115500 2706500 6195 194 6912 15622;15623 14255 14255 350 0 SVESTSPEPSK YQMKSVLKSVESTSPE STSPEPSKIMLVEPPV K S V S K I 0 0 0 0 0 0 2 0 0 0 0 1 0 0 2 4 1 0 0 1 0 0 11 0 1146.5404 P18583 P18583 278 288 SON Protein SON yes yes 2 0.00067326 106.26 By MS/MS 3 6564600 0 6564600 6196 1600 6913 15624;15625;15626 14256;14257;14258 14258 2945;2946;6681 3 SVESTSPEPSKIMLVEPPVAK YQMKSVLKSVESTSPE LVEPPVAKVLEPSETL K S V A K V 1 0 0 0 0 0 3 0 0 1 1 2 1 0 4 4 1 0 0 3 0 0 21 1 2224.1661 P18583 P18583 278 298 SON Protein SON yes yes 3 0.00070934 67.312 By MS/MS By MS/MS 1 1 17991000 11347000 6644100 6197 1600 6914 15627;15628 14259;14260 14259 2945;2946;6681 2 SVFGETEEQK KSDCAQDKSVFGETEE FGETEEQKCSTPVYPW K S V Q K C 0 0 0 0 0 1 3 1 0 0 0 1 0 1 0 1 1 0 0 1 0 0 10 0 1152.5299 P17509 P17509 113 122 HOXB6 Homeobox protein Hox-B6 yes yes 1 0.0075711 86.833 By MS/MS By matching 1 1 13679000 4574100 9105300 6198 1594 6915 15629;15630 14261 14261 2925;6678 0 SVFWASSPYR PPPAGNPRSVFWASSP FWASSPYRRRANNNAA R S V Y R R 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 3 0 1 1 1 0 0 10 0 1198.5771 F1T0I1;J3KNL6 F1T0I1 23 32 SEC16A yes no 2 0.0017455 96.64 By matching By MS/MS 1 1 2807000 1608400 1198600 6199 846 6916 15631;15632 14262 14262 1528;1529 1 SVHREESCSDSGTK KPKKPRPKSVHREESC SCSDSGTKCSSTPDNL K S V T K C 0 1 0 1 1 0 2 1 1 0 0 1 0 0 0 4 1 0 0 1 0 0 14 1 1577.674 Q5T5Y3 Q5T5Y3 1372 1385 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 3 0.028555 46.133 By MS/MS By matching 1 1 8727900 2535800 6192100 6200 2099 6917 15633;15634 14263 14263 1 SVICDISPLR GGSLSERRSVICDISP ICDISPLRQIVRDPGA R S V L R Q 0 1 0 1 1 0 0 0 0 2 1 0 0 0 1 2 0 0 0 1 0 0 10 0 1158.6067 Q9UGU0 Q9UGU0 865 874 TCF20 Transcription factor 20 yes yes 2 5.622E-05 119.39 By MS/MS By MS/MS 1 1 6996000 4639900 2356100 6201 2810 6918 15635;15636 14264;14265 14264 5763 2 SVIEPLPVTPTR HTKSVYTRSVIEPLPV PLPVTPTRDVATSPIS R S V T R D 0 1 0 0 0 0 1 0 0 1 1 0 0 0 3 1 2 0 0 2 0 0 12 0 1307.7449 H0YCM0;E9PM17;B3KNX7;Q13153 H0YCM0 95 106 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 2 0.012861 85.536 By matching By MS/MS 1 1 9154200 3734800 5419400 6202 473 6919 15637;15638 14266 14266 1 SVIEPLPVTPTRDVATSPISPTENNTTPPDALTR HTKSVYTRSVIEPLPV TPPDALTRNTEKQKKK R S V T R N 2 2 2 2 0 0 2 0 0 2 2 0 0 0 7 3 7 0 0 3 0 0 34 1 3585.8526 H0YCM0;E9PM17;B3KNX7;Q13153 H0YCM0 95 128 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 3 0.0069403 44.021 By matching By MS/MS 1 1 34318000 16160000 18158000 6203 473 6920 15639;15640 14267 14267 901;902;6344;6345 1 SVKEDSNLTLQEK PDKMKKSKSVKEDSNL SNLTLQEKKEKIQTGL K S V E K K 0 0 1 1 0 1 2 0 0 0 2 2 0 0 0 2 1 0 0 1 0 0 13 1 1489.7624 H0YLE8;P46940 H0YLE8 871 883 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 0.012284 110.57 By MS/MS 1 0 0 0 6204 1091 6921 15641 14268 14268 2008 1 SVKHDSIPAADTFEDLSDVEGGGSEPTQR PRPEDLRRSVKHDSIP GGSEPTQRDAGSRDEK R S V Q R D 2 1 0 4 0 1 3 3 1 1 1 1 0 1 2 4 2 0 0 2 0 0 29 1 3043.4007 O95671 O95671 223 251 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 3;4 0.00016613 63.297 By MS/MS By MS/MS 2 2 104170000 48298000 55871000 6205 1494 6922 15642;15643;15644;15645 14269;14270;14271 14271 2769 3 SVKTSPTTQSK SNSSPIGKSVKTSPTT TSPTTQSKHNTTSAKG K S V S K H 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 3 3 0 0 1 0 0 11 1 1162.6194 Q5UIP0;H7C2B5 Q5UIP0 2239 2249 RIF1 Telomere-associated protein RIF1 yes no 2 1.0902E-05 139.19 By MS/MS By MS/MS 1 1 16095000 9319400 6776000 6206 2112 6923 15646;15647 14272;14273;14274;14275 14275 4183 4 SVKTSPTTQSKHNTTSAK SNSSPIGKSVKTSPTT KHNTTSAKGFLSPGSR K S V A K G 1 0 1 0 0 1 0 0 1 0 0 3 0 0 1 4 5 0 0 1 0 0 18 2 1901.9807 Q5UIP0;H7C2B5 Q5UIP0 2239 2256 RIF1 Telomere-associated protein RIF1 yes no 4 0.026703 41.695 By matching By MS/MS 1 1 5285600 1707800 3577900 6207 2112 6924 15648;15649 14276 14276 4183 0 SVLMKRDSDSEGD VLLSSVRRSVLMKRDS RDSDSEGD________ R S V G D - 0 1 0 3 0 0 1 1 0 0 1 1 1 0 0 3 0 0 0 1 0 0 13 2 1437.6406 Q9H2J4 Q9H2J4 227 239 PDCL3 Phosducin-like protein 3 yes yes 2 0.0096616 57.414 By MS/MS By MS/MS 2 2 40475000 20277000 20199000 6208 2644 6925 15650;15651;15652;15653 14277;14278;14279 14279 352 5385;5386 3 SVLPPDGNGSPVLPDKR AWSEPRKRSVLPPDGN SPVLPDKRNGIFPAAA R S V K R N 0 1 1 2 0 0 0 2 0 0 2 1 0 0 4 2 0 0 0 2 0 0 17 1 1746.9264 Q8N6S5 Q8N6S5 71 87 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 yes yes 3 0.0044636 54.281 By matching By MS/MS 1 1 6733800 4510500 2223300 6209 2323 6926 15654;15655 14280 14280 4662 1 SVLPTAIPAVLPAASPCSSPK NSPPSAQKSVLPTAIP ASPCSSPKTGLSARLS K S V P K T 4 0 0 0 1 0 0 0 0 1 2 1 0 0 5 4 1 0 0 2 0 0 21 0 2062.1133 O94806 O94806 13 33 PRKD3 Serine/threonine-protein kinase D3 yes yes 2;3 0.00022038 74.703 By MS/MS By MS/MS 3 3 42769000 22009000 20760000 6210 1463 6927;6928 15656;15657;15658;15659;15660;15661 14281;14282;14283;14284 14282 2709;2710;2711 4 SVLPTAIPAVLPAASPCSSPKTGLSAR NSPPSAQKSVLPTAIP PKTGLSARLSNGSFSA K S V A R L 5 1 0 0 1 0 0 1 0 1 3 1 0 0 5 5 2 0 0 2 0 0 27 1 2647.4367 O94806 O94806 13 39 PRKD3 Serine/threonine-protein kinase D3 yes yes 3 0.0067404 48.867 By matching By MS/MS 1 1 5495900 3650100 1845800 6211 1463 6929 15662;15663 14285 14285 2709;2710;2711;2712 1 SVNDLLDETSTFKPGHAR QRRRDRPRSVNDLLDE TFKPGHARSRSDITQV R S V A R S 1 1 1 2 0 0 1 1 1 0 2 1 0 1 1 2 2 0 0 1 0 0 18 1 1985.9807 C9J119;Q6ZWE6 C9J119 132 149 PLEKHM3 Pleckstrin homology domain-containing family M member 3 yes no 3 0.015253 47.814 By matching By MS/MS 1 1 2765900 1385600 1380300 6212 553 6930 15664;15665 14286 14286 1024 1 SVNEGAYIR YRSRLRQRSVNEGAYI VNEGAYIRLHKGMEKK R S V I R L 1 1 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 9 0 1007.5036 O95625 O95625 511 519 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 2 0.0048178 102.06 By MS/MS By MS/MS 1 1 3087800 1703000 1384800 6213 1492 6931 15666;15667 14287;14288 14287 2767 2 SVNEILGLAESSPNEPK DLEKDIEKSVNEILGL ESSPNEPKAATLAVPP K S V P K A 1 0 2 0 0 0 3 1 0 1 2 1 0 0 2 3 0 0 0 1 0 0 17 0 1782.9 Q9H8G2 Q9H8G2 301 317 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 2;3 1.7111E-47 182.09 By MS/MS By MS/MS 2 2 28803000 15762000 13041000 6214 2679 6932 15668;15669;15670;15671 14289;14290;14291 14290 5467;5468 3 SVNFSLTPNEIK EKTPLGERSVNFSLTP SLTPNEIKVSAEAEVA R S V I K V 0 0 2 0 0 0 1 0 0 1 1 1 0 1 1 2 1 0 0 1 0 0 12 0 1347.7034 P46821 P46821 1276 1287 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0043133 76.282 By MS/MS By matching 1 1 2252900 1129200 1123700 6215 1712 6933 15672;15673 14292 14292 3184 1 SVNGGPGSPDLAR SPSMGRYRSVNGGPGS PGSPDLARHYKSSSPL R S V A R H 1 1 1 1 0 0 0 3 0 0 1 0 0 0 2 2 0 0 0 1 0 0 13 0 1225.6051 O60245;A0A087X2C4;H0YAH0 O60245 982 994 PCDH7 Protocadherin-7 yes no 2 0.0012916 102.63 By MS/MS By MS/MS 2 2 63451000 35458000 27992000 6216 1399 6934;6935 15674;15675;15676;15677 14293;14294;14295 14293 2569 3 SVPGTTSSPLVGDISPK SVSQDFSRSVPGTTSS LVGDISPKSSPHEVKF R S V P K S 0 0 0 1 0 0 0 2 0 1 1 1 0 0 3 4 2 0 0 2 0 0 17 0 1640.8621 H0Y6S1;Q9UQR0 H0Y6S1 92 108 SCML2 Sex comb on midleg-like protein 2 yes no 2 6.888E-22 143.57 By MS/MS By MS/MS 1 1 59779000 37413000 22367000 6217 1033 6936 15678;15679 14296;14297;14298 14298 1925 3 SVPGYKVEEKSP PKRSVLSKSVPGYKVE YKVEEKSP________ K S V S P - 0 0 0 0 0 0 2 1 0 0 0 2 0 0 2 2 0 0 1 2 0 0 12 2 1318.6769 S5FZ81 S5FZ81 366 377 PHF10 yes yes 2 0.0090677 98.337 By matching By MS/MS 1 1 41771000 21405000 20367000 6218 3012 6937 15680;15681 14299 14299 6204 1 SVQEGENPDDGVR MSKRKRKRSVQEGENP ENPDDGVRGSPPEDYR R S V V R G 0 1 1 2 0 1 2 2 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 0 1400.6168 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 17 29 RBM34 RNA-binding protein 34 yes no 2 5.3061E-12 149.32 By MS/MS By MS/MS 1 1 42183000 21418000 20765000 6219 395 6938 15682;15683 14300;14301;14302 14302 761 3 SVQEGENPDDGVRGSPPEDYR MSKRKRKRSVQEGENP GSPPEDYRLGQVASSL R S V Y R L 0 2 1 3 0 1 3 3 0 0 0 0 0 0 3 2 0 0 1 2 0 0 21 1 2302.0098 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 17 37 RBM34 RNA-binding protein 34 yes no 3 0.0017498 60.062 By MS/MS By MS/MS 2 2 40697000 24082000 16615000 6220 395 6939;6940 15684;15685;15686;15687 14303;14304;14305;14306 14305 761;762 4 SVRIPSPNILK ERNSPNPRSVRIPSPN IPSPNILKTGLTENVD R S V L K T 0 1 1 0 0 0 0 0 0 2 1 1 0 0 2 2 0 0 0 1 0 0 11 1 1222.7398 Q5VUA4 Q5VUA4 2096 2106 ZNF318 Zinc finger protein 318 yes yes 3 0.0042905 71.031 By MS/MS By matching 1 1 2665800 1766900 898860 6221 2116 6941 15688;15689 14307 14307 4195 1 SVSADEVNSPLSPLTWQPLENQK KQTVECEKSVSADEVN WQPLENQKDQIDEQPW K S V Q K D 1 0 2 1 0 2 2 0 0 0 3 1 0 0 3 4 1 1 0 2 0 0 23 0 2538.2602 Q5VUJ6 Q5VUJ6 510 532 LRCH2 Leucine-rich repeat and calponin homology domain-containing protein 2 yes yes 3 0.014654 44.596 By MS/MS By matching 1 1 16804000 10239000 6565300 6222 2117 6942 15690;15691 14308 14308 4199 1 SVSDQFYR ________________ SVSDQFYRYKMPRLIA R S V Y R Y 0 1 0 1 0 1 0 0 0 0 0 0 0 1 0 2 0 0 1 1 0 0 8 0 1000.4614 H0YK29;H0YK11;H0YMJ8;H0YM54;H0YLZ1;H0YN40;P55010 H0YK29 8 15 EIF5 Eukaryotic translation initiation factor 5 yes no 2 0.0078299 94.309 By MS/MS By MS/MS 1 1 12685000 7356600 5328100 6223 1085 6943 15692;15693 14309;14310 14309 2001 2 SVSEINSDDELSGK SVQSLDSRSVSEINSD SDDELSGKGYALVPII R S V G K G 0 0 1 2 0 0 2 1 0 1 1 1 0 0 0 4 0 0 0 1 0 0 14 0 1478.6736 F8WF45;P82094 F8WF45 338 351 TMF1 TATA element modulatory factor yes no 2 1.2911E-08 128.82 By MS/MS By MS/MS 1 1 59285000 31445000 27840000 6224 954 6944 15694;15695 14311;14312 14311 1728 2 SVSEINSDDELSGKGYALVPIIVNSSTPK SVQSLDSRSVSEINSD IVNSSTPKSKTVESAE R S V P K S 1 0 2 2 0 0 2 2 0 3 2 2 0 0 2 6 1 0 1 3 0 0 29 1 3018.5397 F8WF45;P82094 F8WF45 338 366 TMF1 TATA element modulatory factor yes no 3 3.2855E-06 71.503 By MS/MS By MS/MS 1 1 80093000 48865000 31228000 6225 954 6945 15696;15697 14313;14314;14315 14313 1728 3 SVSENSLVAMDFSGQTGR SPFSTPVRSVSENSLV DFSGQTGRVIENPAEA R S V G R V 1 1 1 1 0 1 1 2 0 0 1 0 1 1 0 4 1 0 0 2 0 0 18 0 1883.8683 Q13322 Q13322 426 443 GRB10 Growth factor receptor-bound protein 10 yes yes 2 1.1115E-05 87.287 By MS/MS By MS/MS 1 1 9540500 6281900 3258600 6226 1910 6946 15698;15699 14316;14317 14316 3665;3666 2 SVSGKTPGDFYDRR PVSCGLARSVSGKTPG PGDFYDRRTTKPEFLR R S V R R T 0 2 0 2 0 0 0 2 0 0 0 1 0 1 1 2 1 0 1 1 0 0 14 2 1583.7692 Q3V6T2;H0Y7K3;H0Y470;H7C2C6;H0Y7U8 Q3V6T2 1734 1747 CCDC88A Girdin yes no 2;3 0.0016212 80.411 By MS/MS By MS/MS 2 2 36902000 20602000 16299000 6227 2040 6947;6948 15700;15701;15702;15703 14318;14319;14320 14319 3996;7733 3 SVSGSPEPAAK VRRVSSSRSVSGSPEP GSPEPAAKKPPAPPSP R S V A K K 2 0 0 0 0 0 1 1 0 0 0 1 0 0 2 3 0 0 0 1 0 0 11 0 1028.5138 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 761 771 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0013884 92.781 By MS/MS By MS/MS 2 1 3636200 1660000 1976100 6228 442 6949 15704;15705;15706 14321;14322 14322 863;864 2 SVSGSPESDELQELR PFLSSARRSVSGSPES SDELQELRTRSAKKRR R S V L R T 0 1 0 1 0 1 3 1 0 0 2 0 0 0 1 4 0 0 0 1 0 0 15 0 1631.7639 Q7Z2Z1 Q7Z2Z1 834 848 TICRR Treslin yes yes 2 0.0019962 68.257 By MS/MS By MS/MS 2 2 18015000 9232000 8783200 6229 2207 6950;6951 15707;15708;15709;15710 14323;14324;14325 14325 4402;4403 3 SVSHGSNHTQKPDEQR ESQPSRKRSVSHGSNH TQKPDEQRSEPSAGIP R S V Q R S 0 1 1 1 0 2 1 1 2 0 0 1 0 0 1 3 1 0 0 1 0 0 16 1 1805.8405 E7EPN9;Q9Y520 E7EPN9 926 941 PRRC2C Protein PRRC2C yes no 3;4 0.0093023 53.981 By matching By MS/MS 2 2 109550000 39506000 70047000 6230 715 6952 15711;15712;15713;15714 14326;14327 14326 1274;1275 2 SVSLQEPR RKNPAYLKSVSLQEPR SVSLQEPRSRWQESSE K S V P R S 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 2 0 0 0 1 0 0 8 0 914.48214 K7EPV3;Q6PJF5;K7EKA3;K7EIY3;K7EQ53;K7EKI1 K7EPV3 88 95 RHBDF2 Inactive rhomboid protein 2 yes no 2 0.0056847 107.45 By MS/MS By MS/MS 1 1 23029000 11431000 11599000 6231 1284 6953 15715;15716 14328;14329 14329 2316 2 SVSLTGAPESVQK DSGGLPERSVSLTGAP GAPESVQKAKMMLDDI R S V Q K A 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 3 1 0 0 2 0 0 13 0 1301.6827 A0A087WTP3;Q92945;M0QXW7;M0QYH3;M0R0I5 A0A087WTP3 191 203 KHSRP Far upstream element-binding protein 2 yes no 2 0.007547 67.019 By MS/MS By MS/MS 1 1 8848400 4185500 4662900 6232 28 6954 15717;15718 14330;14331 14331 55 2 SVSPLLSTHVLGK ERREKVKRSVSPLLST LSTHVLGKEKIASMLP R S V G K E 0 0 0 0 0 0 0 1 1 0 3 1 0 0 1 3 1 0 0 2 0 0 13 0 1336.7715 X6RL08;X6R907;Q96H12 X6RL08 96 108 MSANTD3 Myb/SANT-like DNA-binding domain-containing protein 3 yes no 2 0.017614 59.796 By MS/MS 1 814700 0 814700 6233 2496 6955 15719 14332 14332 5024 1 SVSPTFLNPSDENLK CLNVQSQRSVSPTFLN NPSDENLKTLCNFAGD R S V L K T 0 0 2 1 0 0 1 0 0 0 2 1 0 1 2 3 1 0 0 1 0 0 15 0 1646.8152 Q9UKA4 Q9UKA4 1240 1254 AKAP11 A-kinase anchor protein 11 yes yes 2 2.8508E-20 141.06 By MS/MS By MS/MS 1 1 33690000 19251000 14440000 6234 2827 6956 15720;15721 14333;14334;14335 14335 5821 3 SVSQERLEDSVLMK QSVQIRQRSVSQERLE LEDSVLMKYCPRSASQ R S V M K Y 0 1 0 1 0 1 2 0 0 0 2 1 1 0 0 3 0 0 0 2 0 0 14 1 1619.8189 Q5T5U3;E7ESW5;F8W9U9;A0A1B0GV73;A0A087WW76 Q5T5U3 456 469 ARHGAP21 Rho GTPase-activating protein 21 yes no 2 0.0080884 68.262 By MS/MS By matching 1 1 12399000 6376000 6022600 6235 2098 6957 15722;15723 14336 14336 281 4153 1 SVSSDSLGPPRPAPAR MGDPVLLRSVSSDSLG PPRPAPARTPTQPPPE R S V A R T 2 2 0 1 0 0 0 1 0 0 1 0 0 0 4 4 0 0 0 1 0 0 16 1 1592.8271 Q9P1Y5 Q9P1Y5 429 444 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 3 0.0014703 67.234 By MS/MS By MS/MS 1 1 12176000 7144600 5031200 6236 2778 6958 15724;15725 14337;14338 14337 5702 2 SVSSENPTYPSAPLKPVTVPPR PRPLLLKKSVSSENPT KPVTVPPRLAGASQAK K S V P R L 1 1 1 0 0 0 1 0 0 0 1 1 0 0 6 4 2 0 1 3 0 0 22 1 2322.222 A0A0U1RQE4;Q5HYK7;A0A0U1RQN2 A0A0U1RQE4 428 449 SH3D19 SH3 domain-containing protein 19 yes no 3 0.024289 56.292 By MS/MS 1 0 0 0 6237 336 6959 15726 14339 14339 1 SVSSFPVPQDNVDTHPGSGK ISRAATRRSVSSFPVP DTHPGSGKEVRVPATA R S V G K E 0 0 1 2 0 1 0 2 1 0 0 1 0 1 3 4 1 0 0 3 0 0 20 0 2053.9705 C9JAY7;E7EVC7;Q676U5 C9JAY7 124 143 ATG16L1 Autophagy-related protein 16-1 yes no 2;3 0.00083385 68.569 By MS/MS By MS/MS 2 2 38120000 16830000 21290000 6238 581 6960 15727;15728;15729;15730 14340;14341 14340 1062 2 SVSSFPVPQDNVDTHPGSGKEVR ISRAATRRSVSSFPVP PGSGKEVRVPATALCV R S V V R V 0 1 1 2 0 1 1 2 1 0 0 1 0 1 3 4 1 0 0 4 0 0 23 1 2438.1826 C9JAY7;E7EVC7;Q676U5 C9JAY7 124 146 ATG16L1 Autophagy-related protein 16-1 yes no 3 0.00022841 68.074 By MS/MS By MS/MS 1 1 17258000 10330000 6928600 6239 581 6961 15731;15732 14342;14343 14342 1062 2 SVSSNVASVSPIPAGSK GSPRTPNRSVSSNVAS SPIPAGSKKIDPNMKA R S V S K K 2 0 1 0 0 0 0 1 0 1 0 1 0 0 2 6 0 0 0 3 0 0 17 0 1585.8312 Q9Y6G9;E9PHI6 Q9Y6G9 412 428 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 3.1997E-12 129.12 By MS/MS By MS/MS 2 2 80695000 43442000 37253000 6240 2947 6962 15733;15734;15735;15736 14344;14345;14346;14347;14348;14349 14344 6125;6126;6127 6 SVSSPTSSNTPTPTK RGPSNPRKSVSSPTSS SNTPTPTKHLRTPSTK K S V T K H 0 0 1 0 0 0 0 0 0 0 0 1 0 0 3 5 4 0 0 1 0 0 15 0 1489.726 Q5M775 Q5M775 131 145 SPECC1 Cytospin-B yes yes 2 0.025096 53.169 By matching By MS/MS 1 1 7262700 4229900 3032800 6241 2081 6963 15737;15738 14350 14350 1 SVSSSPWLPQDGFDPSDYAEPMDAVVKPR GHRDGQRKSVSSSPWL MDAVVKPRNEEENIYS K S V P R N 2 1 0 4 0 1 1 1 0 0 1 1 1 1 5 5 0 1 1 3 0 0 29 1 3176.4761 Q9NRY4 Q9NRY4 1070 1098 ARHGAP35 Rho GTPase-activating protein 35 yes yes 3 0.017475 43.579 By MS/MS By matching 1 1 32419000 23337000 9082200 6242 2725 6964 15739;15740 14351 14351 5570;7905 1 SVSSSVQVCPEVGKR AKSNQVSRSVSSSVQV VCPEVGKRNLLKVLKE R S V K R N 0 1 0 0 1 1 1 1 0 0 0 1 0 0 1 4 0 0 0 4 0 0 15 1 1617.8145 Q8IXW5 Q8IXW5 350 364 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 2 0.00075972 93.237 By MS/MS 1 3996000 3996000 0 6243 2282 6965 15741 14352 14352 4583 1 SVSSVLSSLTPAK PPKPDPVKSVSSVLSS LSSLTPAKVAPVINNG K S V A K V 1 0 0 0 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 2 0 0 13 0 1274.7082 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 347 359 MTA1 Metastasis-associated protein MTA1 yes no 2 3.5054E-10 143.93 By MS/MS By MS/MS 1 1 5037800 3011100 2026700 6244 735 6966 15742;15743 14353;14354;14355 14353 6425 3 SVSSYGNIR SPCTPRLRSVSSYGNI VSSYGNIRAVATARSL R S V I R A 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 3 0 0 1 1 0 0 9 0 981.48796 Q8N122 Q8N122 719 727 RPTOR Regulatory-associated protein of mTOR yes yes 2 0.001779 125.68 By MS/MS By MS/MS 1 1 34600000 17753000 16847000 6245 2296 6967 15744;15745 14356;14357 14357 4607;4608;4609 2 SVSTPSEAGSQDSGDGAVGSR PPMSPSSKSVSTPSEA GDGAVGSRTLHW____ K S V S R T 2 1 0 2 0 1 1 4 0 0 0 0 0 0 1 6 1 0 0 2 0 0 21 0 1949.8563 E9PGG1;E7ETL8;E7EQU2;E7EV09;E7EQL5;E7EUM4;E7ERR6;E7ERH4;E7ET01;E7ESD3;E7EMU4;Q13409 E9PGG1 86 106 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 2 0.0010022 70.26 By MS/MS By matching 1 1 14987000 6593400 8393800 6246 721 6968 15746;15747 14358 14358 1284 1 SVSTRSPHQLLSPSSFSPSATPSQK PETPLTKRSVSTRSPH PSATPSQKYNSRSNRG R S V Q K Y 1 1 0 0 0 2 0 0 1 0 2 1 0 1 4 9 2 0 0 1 0 0 25 1 2612.3194 E9PIQ6;Q14181 E9PIQ6 96 120 POLA2 DNA polymerase alpha subunit B yes no 3 0.02036 41.208 By MS/MS By matching 1 1 9751400 5218000 4533300 6247 804 6969 15748;15749 14359 14359 1439;1440;1441 1 SVSTSPSILTAFLK AVASVESRSVSTSPSI SILTAFLKESRAPEHF R S V L K E 1 0 0 0 0 0 0 0 0 1 2 1 0 1 1 4 2 0 0 1 0 0 14 0 1449.8079 Q6ZVF9 Q6ZVF9 332 345 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 yes yes 2 0.00081049 96.371 By MS/MS 1 887950 887950 0 6248 2188 6970 15750 14360 14360 4361 1 SVSTTNIAGHFNDESPLGLR RSSLSLAKSVSTTNIA DESPLGLRRILSQSTD K S V L R R 1 1 2 1 0 0 1 2 1 1 2 0 0 1 1 3 2 0 0 1 0 0 20 0 2114.0392 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 194 213 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 3 3.1791E-08 88.264 By MS/MS By MS/MS 1 1 26780000 15064000 11715000 6249 2450 6971 15751;15752 14361;14362 14361 4939 2 SVSTTNIAGHFNDESPLGLRR RSSLSLAKSVSTTNIA ESPLGLRRILSQSTDS K S V R R I 1 2 2 1 0 0 1 2 1 1 2 0 0 1 1 3 2 0 0 1 0 0 21 1 2270.1404 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 194 214 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 3 0.00024154 71.202 By matching By MS/MS 1 1 22820000 11774000 11046000 6250 2450 6972 15753;15754 14363 14363 4939 1 SVSVATGLNMMK SEDPSLQRSVSVATGL ATGLNMMKKQKVKTIF R S V M K K 1 0 1 0 0 0 0 1 0 0 1 1 2 0 0 2 1 0 0 2 0 0 12 0 1236.6206 Q9UHR4 Q9UHR4 329 340 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 9.7191E-07 122.34 By MS/MS 1 1283100 1283100 0 6251 2816 6973 15755 14364 14364 5785 1 SVSVDESRPELIFR QKTSLPSRSVSVDESR SRPELIFRLAVGTFSI R S V F R L 0 2 0 1 0 0 2 0 0 1 1 0 0 1 1 3 0 0 0 2 0 0 14 1 1632.8471 Q96BY7 Q96BY7 495 508 ATG2B Autophagy-related protein 2 homolog B yes yes 3 0.010097 56.414 By MS/MS By MS/MS 1 1 7331600 2350000 4981600 6252 2463 6974 15756;15757 14365;14366 14365 4962 2 SVSVVTGSEQK ATTKPIVRSVSVVTGS VVTGSEQKRKVLEATG R S V Q K R 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 3 1 0 0 3 0 0 11 0 1119.5772 I3L2J8;Q9UPN4 I3L2J8 45 55 CEP131 Centrosomal protein of 131 kDa yes no 2 0.00015043 113.61 By MS/MS By MS/MS 1 1 9447500 4343700 5103800 6253 1208 6975 15758;15759 14367;14368 14368 2195 2 SVTDYAQQNPAAQIPAR ETEQRAPKSVTDYAQQ PAAQIPARQREIEMNR K S V A R Q 4 1 1 1 0 3 0 0 0 1 0 0 0 0 2 1 1 0 1 1 0 0 17 0 1828.9068 A0A0A0MRM8 A0A0A0MRM8 1110 1126 MYO6 yes yes 2 5.2594E-17 137.01 By MS/MS By MS/MS 1 1 35328000 16494000 18834000 6254 190 6976 15760;15761 14369;14370 14369 6270;7201 2 SVTEQGAELSNEER DDMAACMKSVTEQGAE AELSNEERNLLSVAYK K S V E R N 1 1 1 0 0 1 4 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 14 0 1547.7063 E7EX29;P63104;E5RGE1;E5RIR4;E9PD24;E7EVZ2;E7ESK7 E7EX29 28 41 YWHAZ 14-3-3 protein zeta/delta yes no 2 0.00015169 112.94 By MS/MS By MS/MS 1 1 14161000 8248100 5912700 6255 751 6977 15762;15763 14371;14372 14372 2 SVTSNQSDGTQESCESPDVLDR SGESPFSRSVTSNQSD ESPDVLDRHQTMEVSC R S V D R H 0 1 1 3 1 2 2 1 0 0 1 0 0 0 1 5 2 0 0 2 0 0 22 0 2410.019 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 251 272 NDRG3 Protein NDRG3 yes no 3 0.00072244 63.901 By MS/MS 1 6666000 6666000 0 6256 947 6978 15764 14373 14373 1718 1 SVVGTPAYLAPEVLLNQGYNR IGEKSFRRSVVGTPAY LLNQGYNRSLDMWSVG R S V N R S 2 1 2 0 0 1 1 2 0 0 3 0 0 0 2 1 1 0 2 3 0 0 21 0 2260.1852 B4DTS2;Q9BZL6 B4DTS2 710 730 PRKD2 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2 yes no 2;3 7.0942E-09 96.447 By MS/MS By MS/MS 2 2 27459000 14935000 12524000 6257 491 6979 15765;15766;15767;15768 14374;14375;14376;14377 14377 927;6352 4 SVVGTPAYLAPEVLR IGEKSFRRSVVGTPAY YLAPEVLRSKGYNRSL R S V L R S 2 1 0 0 0 0 1 1 0 0 2 0 0 0 2 1 1 0 1 3 0 0 15 0 1570.8719 O94806;H0Y5M6;Q15139;F8WBA3 Q15139 735 749 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase no no 2;3 0.0003335 111.07 By MS/MS By MS/MS 1 2 61531000 35237000 26294000 6258 1463;1978 6980 15769;15770;15771 14378;14379;14380 14378 2713 3 SVVSDLEADDVK NKELKPQKSVVSDLEA DLEADDVKGSVPLSSS K S V V K G 1 0 0 3 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 12 0 1275.6194 P11388 P11388 1374 1385 TOP2A DNA topoisomerase 2-alpha yes yes 2 1.6278E-10 151.16 By MS/MS By MS/MS 3 3 83506000 41664000 41842000 6259 1565 6981;6982 15772;15773;15774;15775;15776;15777 14381;14382;14383;14384;14385;14386 14381 2879;2880 6 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK NKELKPQKSVVSDLEA EITNPVPKKNVTVKKT K S V P K K 2 0 1 4 0 0 3 1 1 1 2 2 0 1 6 6 3 0 0 5 0 0 38 1 3960.948 P11388 P11388 1374 1411 TOP2A DNA topoisomerase 2-alpha yes yes 4 0.002074 46.696 By MS/MS By matching 1 1 103970000 66455000 37518000 6260 1565 6983 15778;15779 14387 14387 2869;2870;2871;2879;2880 1 SVVSFDKVK KSASREKRSVVSFDKV VVSFDKVKEPRKSRDS R S V V K E 0 0 0 1 0 0 0 0 0 0 0 2 0 1 0 2 0 0 0 3 0 0 9 1 1007.5651 Q15424 Q15424 601 609 SAFB Scaffold attachment factor B1 yes yes 2 0.0051348 107.34 By MS/MS By MS/MS 1 1 20287000 10473000 9814500 6261 1990 6984 15780;15781 14388;14389 14388 3884 2 SVVSFDKVKEPR KSASREKRSVVSFDKV FDKVKEPRKSRDSESH R S V P R K 0 1 0 1 0 0 1 0 0 0 0 2 0 1 1 2 0 0 0 3 0 0 12 2 1389.7616 Q15424 Q15424 601 612 SAFB Scaffold attachment factor B1 yes yes 2;3 6.3982E-08 137.8 By MS/MS By MS/MS 2 2 122130000 65275000 56859000 6262 1990 6985 15782;15783;15784;15785 14390;14391;14392 14392 3884 3 SVWGSLAVQNSPK MLDAATGKSVWGSLAV LAVQNSPKGCHRDKRT K S V P K G 1 0 1 0 0 1 0 1 0 0 1 1 0 0 1 3 0 1 0 2 0 0 13 0 1371.7147 P18615 P18615 343 355 NELFE Negative elongation factor E yes yes 2 2.844E-07 124.42 By MS/MS By MS/MS 1 1 18106000 8625800 9479900 6263 1601 6986 15786;15787 14393;14394 14393 2952;2953 2 SVYAHFPINVVIQENGSLVEIR LGFRYKMRSVYAHFPI NGSLVEIRNFLGEKYI R S V I R N 1 1 2 0 0 1 2 1 1 3 1 0 0 1 1 2 0 0 1 4 0 0 22 0 2483.3173 D6RAN4;H0Y9V9;P32969;E7ESE0 D6RAN4 94 115 RPL9 60S ribosomal protein L9 yes no 3 0.019439 47.991 By MS/MS 1 4221200 0 4221200 6264 651 6987 15788 14395 14395 0 SVYATMGDHENRSPVKEPVEQPR RTRRRNVRSVYATMGD KEPVEQPRVTRKRLER R S V P R V 1 2 1 1 0 1 3 1 1 0 0 1 1 0 3 2 1 0 1 3 0 0 23 2 2625.2605 Q96T58 Q96T58 1906 1928 SPEN Msx2-interacting protein yes yes 3 0.012008 48.244 By MS/MS By matching 1 1 17050000 9983100 7066800 6265 2545 6988 15789;15790 14396 14396 5149 1 SVYFKPSLTPSGEFR PVSIATNRSVYFKPSL LTPSGEFRKTNQRIDN R S V F R K 0 1 0 0 0 0 1 1 0 0 1 1 0 2 2 3 1 0 1 1 0 0 15 1 1713.8726 P49790 P49790 380 394 NUP153 Nuclear pore complex protein Nup153 yes yes 3 5.7231E-06 111.65 By MS/MS By MS/MS 1 1 10824000 5675800 5148000 6266 1729 6989 15791;15792 14397;14398 14398 6720 2 SWDSSSPVDRPEPEAASPTTR GPIVSRTRSWDSSSPV EAASPTTRTRPVTRSM R S W T R T 2 2 0 2 0 0 2 0 0 0 0 0 0 0 4 5 2 1 0 1 0 0 21 1 2271.0404 C9J0I9;Q86WB0 C9J0I9 311 331 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.00016719 75.239 By MS/MS By MS/MS 1 1 25657000 16271000 9385800 6267 551 6990 15793;15794 14399;14400 14399 1010;1011;1012;1013 2 SWEDSPER NSHGGRSRSWEDSPER SWEDSPERGRPHERAR R S W E R G 0 1 0 1 0 0 2 0 0 0 0 0 0 0 1 2 0 1 0 0 0 0 8 0 1004.4199 A0A1B0GTW1;Q9UDY2;B1AN86 A0A1B0GTW1 229 236 TJP2 Tight junction protein ZO-2 yes no 2 0.017369 94.692 By MS/MS By MS/MS 1 1 0 0 0 6268 368 6991 15795;15796 14401;14402 14401 691;692 2 SWEEPNWMGSPR RLSHSGKRSWEEPNWM PNWMGSPRLLNRDMKT R S W P R L 0 1 1 0 0 0 2 1 0 0 0 0 1 0 2 2 0 2 0 0 0 0 12 0 1474.6299 B0QY95;Q9NQG6 B0QY95 70 81 MIEF1 Mitochondrial dynamics protein MID51 yes no 2 0.0034395 81.904 By MS/MS By MS/MS 1 1 3102100 1615000 1487100 6269 447 6992 15797;15798 14403;14404 14403 877 2 SWGQQAQEYQEQK FSQEVSRRSWGQQAQE AQEYQEQKQRSSSKDG R S W Q K Q 1 0 0 0 0 5 2 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 13 0 1608.7168 Q5VZK9 Q5VZK9 1331 1343 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 2 4.5315E-12 150.26 By MS/MS By MS/MS 1 1 21398000 12398000 8999300 6270 2124 6993 15799;15800 14405;14406 14406 4224 2 SWLRSSFNK DAKKKKKKSWLRSSFN WLRSSFNKAFSIKKGP K S W N K A 0 1 1 0 0 0 0 0 0 0 1 1 0 1 0 3 0 1 0 0 0 0 9 1 1123.5774 A0A0A0MRJ3;H7BZD9 A0A0A0MRJ3 1168 1176 NAV1 yes no 2 0.013667 73.9 By MS/MS By matching 1 1 4171200 2119100 2052100 6271 188 6994 15801;15802 14407 14407 334;335 1 SWLSPRVSPPASPGP PGNPSRARSWLSPRVS SPPASPGP________ R S W G P - 1 1 0 0 0 0 0 1 0 0 1 0 0 0 5 4 0 1 0 1 0 0 15 1 1533.794 A0A0C4DGU2;Q9Y4U1 A0A0C4DGU2 211 225 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes no 2 3.6781E-55 188.16 By MS/MS By MS/MS 3 3 58225000 31008000 27217000 6272 301 6995;6996;6997 15803;15804;15805;15806;15807;15808 14408;14409;14410;14411;14412;14413;14414;14415;14416;14417 14415 543;544;545 10 SWSASDPFYTNDR CSPTHISRSWSASDPF DPFYTNDRSILTLSTM R S W D R S 1 1 1 2 0 0 0 0 0 0 0 0 0 1 1 3 1 1 1 0 0 0 13 0 1544.6532 Q9Y2G3 Q9Y2G3 1152 1164 ATP11B Probable phospholipid-transporting ATPase IF yes yes 2 0.00037765 110.25 By MS/MS By MS/MS 1 1 9723000 4860100 4862800 6273 2889 6998 15809;15810 14418;14419 14418 6022 2 SWSPPPEVSR AGAGGRARSWSPPPEV SPPPEVSRSAHVPSLQ R S W S R S 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 3 0 1 0 1 0 0 10 0 1140.5564 F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31;Q9NR19 F8WCJ4 28 37 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic yes no 2 0.0029083 84.821 By MS/MS By MS/MS 1 1 44825000 23524000 21300000 6274 478 6999 15811;15812 14420;14421;14422;14423 14420 908 4 SWSSYFSLPNPFR PQGGSSSKSWSSYFSL FSLPNPFRSSPLGQND K S W F R S 0 1 1 0 0 0 0 0 0 0 1 0 0 2 2 4 0 1 1 0 0 0 13 0 1586.7518 O14654 O14654 804 816 IRS4 Insulin receptor substrate 4 yes yes 2 0.0015847 83 By MS/MS 1 1542000 1542000 0 6275 1343 7000 15813 14424 14424 7507 1 SWVIGSPEILR AGLKGRDRSWVIGSPE IGSPEILRKRLSVSES R S W L R K 0 1 0 0 0 0 1 1 0 2 1 0 0 0 1 2 0 1 0 1 0 0 11 0 1255.6925 Q6P0Q8;E7ERL6 Q6P0Q8 895 905 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes no 2 0.0070791 73.466 By MS/MS By MS/MS 1 1 8792000 5721900 3070100 6276 2151 7001 15814;15815 14425;14426 14425 4284 2 SYDNLTTACDNTVPLASR LSRLPKTRSYDNLTTA NTVPLASRRCSDPSLN R S Y S R R 2 1 2 2 1 0 0 0 0 0 2 0 0 0 1 2 3 0 1 1 0 0 18 0 1996.916 G5E953;Q13615 G5E953 477 494 MTMR3 Myotubularin-related protein 3 yes no 2 6.8624E-09 113.29 By MS/MS By MS/MS 1 1 15367000 7448500 7919000 6277 989 7002 15816;15817 14427;14428 14427 1805 2 SYDVPPPPMEPDHPFYSNISK AQVKIWRRSYDVPPPP PFYSNISKDRRYADLT R S Y S K D 0 0 1 2 0 0 1 0 1 1 0 1 1 1 6 3 0 0 2 1 0 0 21 0 2416.1045 P18669;Q8N0Y7 P18669 118 138 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 yes no 3 0.014702 53.381 By MS/MS By MS/MS 1 1 19583000 10808000 8774400 6278 1602 7003 15818;15819 14429;14430 14430 2955 1 SYEDMIGEEVPSDQYYWAPLAQHER SDPRRRLRSYEDMIGE APLAQHERGSLASLDS R S Y E R G 2 1 0 2 0 2 4 1 1 1 1 0 1 0 2 2 0 1 3 1 0 0 25 0 3012.3236 C9JZR2;O60716 C9JZR2 320 344 CTNND1 Catenin delta-1 yes no 3 1.485E-06 77.576 By MS/MS By matching 1 1 15232000 10785000 4446400 6279 624 7004 15820;15821 14431 14431 7337 1 SYELPDGQVITIGNER ASSSSLEKSYELPDGQ VITIGNERFRCPEALF K S Y E R F 0 1 1 1 0 1 2 2 0 2 1 0 0 0 1 1 1 0 1 1 0 0 16 0 1789.8846 P63261;P60709;Q6S8J3;Q562R1;A5A3E0;Q9BYX7;P63267;P68133;P68032;P62736 P63261 239 254 ACTG1;ACTB;POTEE;ACTBL2;POTEF;POTEKP;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Beta-actin-like protein 2;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle no no 2;3 3.4231E-10 128.35 By MS/MS By MS/MS 2 2 54811000 27022000 27789000 6280 1785;1799 7005 15822;15823;15824;15825 14432;14433;14434;14435 14434 3 SYESSEDCSEAAGSPAR SSENYWRKSYESSEDC EAAGSPARKVKMRRH_ K S Y A R K 3 1 0 1 1 0 3 1 0 0 0 0 0 0 1 5 0 0 1 0 0 0 17 0 1801.7061 K7ER58;Q6P6C2 K7ER58 30 46 ALKBH5 RNA demethylase ALKBH5 yes no 2 7.2925E-05 84.653 By MS/MS By MS/MS 1 1 9397600 4532500 4865100 6281 1287 7006 15826;15827 14436;14437 14436 2320 1 SYISPHSSPSHTPTR VPPTSPAKSYISPHSS SPSHTPTRHGRNTVCG K S Y T R H 0 1 0 0 0 0 0 0 2 1 0 0 0 0 3 5 2 0 1 0 0 0 15 0 1652.7907 Q96BY7 Q96BY7 1576 1590 ATG2B Autophagy-related protein 2 homolog B yes yes 3 0.022505 45.577 By matching By MS/MS 1 1 10259000 4810600 5448600 6282 2463 7007 15828;15829 14438 14438 1 SYLPQTVR ATDEGMPKSYLPQTVR SYLPQTVRQGGYMPQ_ K S Y V R Q 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 1 1 0 1 1 0 0 8 0 962.51853 P40189 P40189 904 911 IL6ST Interleukin-6 receptor subunit beta yes yes 2 0.0042789 96.253 By MS/MS By matching 1 1 7270500 4083400 3187100 6283 1683 7008 15830;15831 14439 14439 7598 1 SYLPYPAPEGIAVSPLSLHGK SPPIPYPRSYLPYPAP SPLSLHGKGPVYPHPV R S Y G K G 2 0 0 0 0 0 1 2 1 1 3 1 0 0 4 3 0 0 2 1 0 0 21 0 2195.1627 H7BYY2;Q6W2J9;A1A564 H7BYY2 656 676 BCOR BCL-6 corepressor yes no 3 0.0017861 59.55 By MS/MS By MS/MS 1 1 3678400 2160200 1518200 6284 1155 7009 15832;15833 14440;14441 14441 2104;2105 2 SYNEPPLPTPVSPQPK PPQSLPRRSYNEPPLP TPVSPQPKSPKSPELR R S Y P K S 0 0 1 0 0 1 1 0 0 0 1 1 0 0 6 2 1 0 1 1 0 0 16 0 1749.8938 Q6ZRQ1 Q6ZRQ1 290 305 NSUN4 yes yes 3 0.027375 42.947 By MS/MS 1 0 0 0 6285 2182 7010 15834 14442 14442 7762 1 SYPGHVQPATAR RQATSSRRSYPGHVQP HVQPATAR________ R S Y A R - 2 1 0 0 0 1 0 1 1 0 0 0 0 0 2 1 1 0 1 1 0 0 12 0 1282.6418 H0YDK4;Q86VS8 H0YDK4 20 31 HOOK3 Protein Hook homolog 3 yes no 3 0.013173 62.694 By MS/MS 1 0 0 0 6286 1063 7011 15835 14443 14443 1968 1 SYRLLEDSEESSEETVSR RALLEKNRSYRLLEDS SSEETVSRAGSSLQKK R S Y S R A 0 2 0 1 0 0 5 0 0 0 2 0 0 0 0 5 1 0 1 1 0 0 18 1 2114.9604 A2AB15;A0A140T947;O60231 A2AB15 36 53 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 2;3 6.724E-06 107.41 By MS/MS By MS/MS 2 2 39653000 21956000 17697000 6287 360 7012 15836;15837;15838;15839 14444;14445;14446;14447 14444 667;668;669 4 SYSAGNASQLEQLSR NVCGVRKRSYSAGNAS SQLEQLSRARRSGGEL R S Y S R A 2 1 1 0 0 2 1 1 0 0 2 0 0 0 0 4 0 0 1 0 0 0 15 0 1609.7696 Q14678 Q14678 323 337 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 2 2.0297E-55 183.31 By MS/MS By MS/MS 1 1 61623000 34904000 26719000 6288 1953 7013 15840;15841 14448;14449 14448 3785 2 SYSHDVLPK SSLYNLPRSYSHDVLP YSHDVLPKVSPSSTEA R S Y P K V 0 0 0 1 0 0 0 0 1 0 1 1 0 0 1 2 0 0 1 1 0 0 9 0 1044.524 B7Z3B9;Q13480 B7Z3B9 161 169 GAB1 GRB2-associated-binding protein 1 yes no 2 0.027069 70.552 By MS/MS 2 0 0 0 6289 513 7014 15842;15843 14450;14451 14451 2 SYSLSELSVLQAK NPFFRSKRSYSLSELS ELSVLQAKSDAPTSSS R S Y A K S 1 0 0 0 0 1 1 0 0 0 3 1 0 0 0 4 0 0 1 1 0 0 13 0 1423.7559 Q9P0V3 Q9P0V3 244 256 SH3BP4 SH3 domain-binding protein 4 yes yes 2 5.6897E-05 118.03 By MS/MS By matching 1 1 15602000 8604500 6997200 6290 2776 7015 15844;15845 14452 14452 5694 1 SYSMIVNNLLK LVKNLNGKSYSMIVNN MIVNNLLKPISVEGSS K S Y L K P 0 0 2 0 0 0 0 0 0 1 2 1 1 0 0 2 0 0 1 1 0 0 11 0 1280.6799 Q9HB71 Q9HB71 124 134 CACYBP Calcyclin-binding protein yes yes 3 0.014196 50.353 By MS/MS By matching 1 1 5517300 1507600 4009700 6291 2686 7016 15846;15847 14453 14453 355 5477;5478 1 SYSPDGKESPSDKK KKDKSRKRSYSPDGKE KESPSDKKSKTDGSQK R S Y K K S 0 0 0 2 0 0 1 1 0 0 0 3 0 0 2 4 0 0 1 0 0 0 14 2 1523.7104 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87 D6REM6 596 609 MATR3 Matrin-3 yes no 2;3 1.0816E-11 130.47 By MS/MS By MS/MS 5 6 391670000 140480000 251190000 6292 333 7017;7018 15848;15849;15850;15851;15852;15853;15854;15855;15856;15857;15858 14454;14455;14456;14457;14458;14459;14460;14461;14462;14463;14464;14465 14465 622;623;624 12 SYSQEAAIEQPVAPR SRSASLLKSYSQEAAI IEQPVAPRPTALSPDY K S Y P R P 3 1 0 0 0 2 2 0 0 1 0 0 0 0 2 2 0 0 1 1 0 0 15 0 1644.8107 Q99811 Q99811 177 191 PRRX2 Paired mesoderm homeobox protein 2 yes yes 2 0.029545 41.283 By matching By MS/MS 1 1 999000 415060 583940 6293 2560 7019 15859;15860 14466 14466 7865 1 SYSSPDITQAIQEEEKR REPSKLKRSYSSPDIT AIQEEEKRKPTVTPTV R S Y K R K 1 1 0 1 0 2 3 0 0 2 0 1 0 0 1 3 1 0 1 0 0 0 17 1 1979.9436 P40818 P40818 716 732 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 2;3 1.5215E-16 131.54 By MS/MS By MS/MS 2 2 110580000 63870000 46714000 6294 1687 7020 15861;15862;15863;15864 14467;14468;14469 14467 3100 3 SYTLVVAK PPWLKKQKSYTLVVAK SYTLVVAKDGGDKKEP K S Y A K D 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 8 0 879.50657 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 87 94 EPB41L2 Band 4.1-like protein 2 yes no 2 0.0018157 152.47 By MS/MS By MS/MS 2 2 53875000 28508000 25367000 6295 1387 7021 15865;15866;15867;15868 14470;14471;14472 14471 2543;6617;7521 3 TAADELEAFLGGGAPGGRHPGGGDYEEL RPPRSRERTAADELEA GGGDYEEL________ R T A E L - 4 1 0 2 0 0 4 8 1 0 3 0 0 1 2 0 1 0 1 0 0 0 28 1 2742.2522 H0Y4Z8;Q3YEC7 H0Y4Z8 703 730 RABL6 Rab-like protein 6 yes no 3 1.1267E-42 129.84 By MS/MS By MS/MS 1 1 175740000 142060000 33681000 6296 1021 7022 15869;15870 14473;14474 14473 7436 2 TAADVVSPGANSVDSR TEKVKDPKTAADVVSP GANSVDSRVQRPKEES K T A S R V 3 1 1 2 0 0 0 1 0 0 0 0 0 0 1 3 1 0 0 3 0 0 16 0 1544.7431 Q01804 Q01804 1000 1015 OTUD4 OTU domain-containing protein 4 yes yes 2 1.5895E-20 140.46 By MS/MS By MS/MS 1 1 46731000 26903000 19828000 6297 1833 7023 15871;15872 14475;14476 14476 3432 2 TAADVVSPGANSVDSRVQR TEKVKDPKTAADVVSP SVDSRVQRPKEESSED K T A Q R P 3 2 1 2 0 1 0 1 0 0 0 0 0 0 1 3 1 0 0 4 0 0 19 1 1927.9712 Q01804 Q01804 1000 1018 OTUD4 OTU domain-containing protein 4 yes yes 2 0.027534 49.395 By matching By MS/MS 1 1 18743000 9523100 9220000 6298 1833 7024 15873;15874 14477 14477 3432 1 TAAELLQSQGSQAGGSQTLKR VNAFKQRKTAAELLQS GGSQTLKRDKEKKNLG K T A K R D 3 1 0 0 0 4 1 3 0 0 3 1 0 0 0 3 2 0 0 0 0 0 21 1 2130.1029 B1AMS2;Q14141 B1AMS2 401 421 SEPT6 Septin-6 yes no 3 0.011358 43.888 By MS/MS 1 2628000 0 2628000 6299 466 7025 15875 14478 14478 893 1 TAAPSPSLLYK YNAVKPEKTAAPSPSL PSPSLLYKSTKEDRRS K T A Y K S 2 0 0 0 0 0 0 0 0 0 2 1 0 0 2 2 1 0 1 0 0 0 11 0 1146.6285 Q9BTC0 Q9BTC0 519 529 DIDO1 Death-inducer obliterator 1 yes yes 2 0.003761 81.95 By MS/MS By MS/MS 1 1 5592400 3249900 2342600 6300 2576 7026 15876;15877 14479;14480 14479 5207 2 TADGRVSPAGGTLDDKPK TKITHLVRTADGRVSP GTLDDKPKEQLQRSLP R T A P K E 2 1 0 3 0 0 0 3 0 0 1 2 0 0 2 1 2 0 0 1 0 0 18 2 1783.9064 C9JA69;Q8WY36 C9JA69 788 805 BBX HMG box transcription factor BBX yes no 3 0.001594 69.111 By MS/MS By MS/MS 1 1 39438000 21114000 18324000 6301 578 7027 15878;15879 14481;14482 14482 1057 2 TADSSSSEDEEEYVVEK ________________ EEEYVVEKVLDRRVVK R T A E K V 1 0 0 2 0 0 5 0 0 0 0 1 0 0 0 4 1 0 1 2 0 0 17 0 1902.7854 P45973;F8VNY3 P45973 8 24 CBX5 Chromobox protein homolog 5 yes no 2 1.2741E-10 121.82 By matching By MS/MS 1 1 40120000 22482000 17638000 6302 1702 7028 15880;15881 14483 14483 3134;3135;3136 1 TADSSSSEDEEEYVVEKVLDRR ________________ VEKVLDRRVVKGQVEY R T A R R V 1 2 0 3 0 0 5 0 0 0 1 1 0 0 0 4 1 0 1 3 0 0 22 2 2542.1671 P45973;F8VNY3 P45973 8 29 CBX5 Chromobox protein homolog 5 yes no 3 0.015146 47.68 By MS/MS By matching 1 1 5959500 2931700 3027800 6303 1702 7029 15882;15883 14484 14484 3134;3135;3136 1 TADSVFCPHYEK SDIIIPLRTADSVFCP VFCPHYEKVSGDYGHP R T A E K V 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 1 0 1 1 0 0 12 0 1452.6344 P52799 P52799 295 306 EFNB2 Ephrin-B2 yes yes 2;3 4.4187E-07 123.79 By MS/MS By MS/MS 2 2 10074000 5526400 4548000 6304 1757 7030 15884;15885;15886;15887 14485;14486;14487;14488 14487 7639 4 TAEAQLAYELQGAR FSEEVNIKTAEAQLAY AYELQGAREQQKIRQE K T A A R E 4 1 0 0 0 2 2 1 0 0 2 0 0 0 0 0 1 0 1 0 0 0 14 0 1519.7631 K7EKW9;J3QLD9;E7EMK3;Q14254 K7EKW9 168 181 FLOT2 Flotillin-2 yes no 2 0.0069642 63.408 By matching By MS/MS 1 1 9119300 5602800 3516500 6305 705 7031 15888;15889 14489 14489 7352 0 TAELSPK TVSTPVSKTAELSPKN KTAELSPKNLLSPSSF K T A P K N 1 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 7 0 744.40177 E7EVZ1;Q86UP3 E7EVZ1 2733 2739 ZFHX4 Zinc finger homeobox protein 4 yes no 2 0.026893 76.221 By matching By MS/MS 1 1 2355100 988400 1366700 6306 745 7032 15890;15891 14490 14490 1 TAESQTPTPSATSFFSGK STEKESEKTAESQTPT ATSFFSGKSPVTTLLE K T A G K S 2 0 0 0 0 1 1 1 0 0 0 1 0 2 2 4 4 0 0 0 0 0 18 0 1842.8636 P55265;H0YCK3 P55265 596 613 ADAR Double-stranded RNA-specific adenosine deaminase yes no 2 4.3908E-05 95.264 By MS/MS By MS/MS 1 1 13884000 6437200 7446600 6307 1776 7033 15892;15893 14491;14492 14491 3346;6741 2 TAFYNEDDSEEEQR RTRNQGRRTAFYNEDD DDSEEEQRQLLFEDTS R T A Q R Q 1 1 1 2 0 1 4 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 14 0 1731.686 Q8WWQ0 Q8WWQ0 1775 1788 PHIP PH-interacting protein yes yes 2 9.0094E-27 164.7 By MS/MS By MS/MS 1 1 52562000 28834000 23728000 6308 2410 7034 15894;15895 14493;14494 14494 4836 2 TAHNSEAADLEESFNEHELEPSSPK VYCRKHKKTAHNSEAA ELEPSSPKSKKKSRKG K T A P K S 3 0 2 1 0 0 6 0 2 0 2 1 0 1 2 4 1 0 0 0 0 0 25 0 2767.2209 Q5JRC6;A0A0D9SGE8 Q5JRC6 134 158 PHF6 yes no 3;4 1.7429E-14 101.2 By MS/MS By MS/MS 2 2 122660000 66674000 55986000 6309 319 7035 15896;15897;15898;15899 14495;14496;14497;14498 14496 582;583;584 4 TAHNSEAADLEESFNEHELEPSSPKSK VYCRKHKKTAHNSEAA EPSSPKSKKKSRKGRP K T A S K K 3 0 2 1 0 0 6 0 2 0 2 2 0 1 2 5 1 0 0 0 0 0 27 1 2982.3479 Q5JRC6;A0A0D9SGE8 Q5JRC6 134 160 PHF6 yes no 4 0.00055865 57.829 By MS/MS By matching 1 1 26265000 17518000 8747400 6310 319 7036 15900;15901 14499;14500 14499 582;583;584 2 TAHNSEADLEESFNEHELEPSSPK VYCRKHKKTAHNSEAD ELEPSSPKSKKKSRKG K T A P K S 2 0 2 1 0 0 6 0 2 0 2 1 0 1 2 4 1 0 0 0 0 0 24 0 2696.1838 Q8IWS0 Q8IWS0 134 157 PHF6 PHD finger protein 6 yes yes 3;4 5.1548E-05 71.042 By MS/MS By MS/MS 3 2 341040000 285510000 55533000 6311 2271 7037;7038 15902;15903;15904;15905;15906 14501;14502;14503;14504 14503 4563;4564;4565 4 TAHNSEADLEESFNEHELEPSSPKSK VYCRKHKKTAHNSEAD EPSSPKSKKKSRKGRP K T A S K K 2 0 2 1 0 0 6 0 2 0 2 2 0 1 2 5 1 0 0 0 0 0 26 1 2911.3108 Q8IWS0 Q8IWS0 134 159 PHF6 PHD finger protein 6 yes yes 4 6.9865E-08 81.38 By MS/MS By MS/MS 2 2 111420000 60183000 51240000 6312 2271 7039;7040 15907;15908;15909;15910 14505;14506;14507;14508 14505 4563;4564;4565;4566 4 TALATSPITVGDLGIVR KKLAQSRRTALATSPI VGDLGIVRRRSRDVPE R T A V R R 2 1 0 1 0 0 0 2 0 2 2 0 0 0 1 1 3 0 0 2 0 0 17 0 1682.9567 P13994 P13994 281 297 CCDC130 Coiled-coil domain-containing protein 130 yes yes 2 0.00016409 88.311 By MS/MS By MS/MS 1 1 5129300 2730400 2398900 6313 1578 7041 15911;15912 14509;14510 14510 2900;6672 2 TALPAQSAATLPAR PTSDRKAKTALPAQSA SAATLPARTQETPSAQ K T A A R T 5 1 0 0 0 1 0 0 0 0 2 0 0 0 2 1 2 0 0 0 0 0 14 0 1366.7569 A0A087WUZ3;Q01082 A0A087WUZ3 2180 2193 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2;3 5.6614E-07 124.5 By MS/MS By MS/MS 2 2 166470000 92021000 74452000 6314 53 7042 15913;15914;15915;15916 14511;14512;14513 14512 6226 3 TALSSTESCTMKGEEKSPK MAKDLSSKTALSSTES KGEEKSPKTKKDKRPP K T A P K T 1 0 0 0 1 0 3 1 0 0 1 3 1 0 1 4 3 0 0 0 0 0 19 2 2069.9609 Q96T23;H0YER1;H0YCN2 Q96T23 554 572 RSF1 Remodeling and spacing factor 1 yes no 3 0.00054803 74.062 By MS/MS By MS/MS 2 2 22337000 11523000 10814000 6315 2544 7043;7044 15917;15918;15919;15920 14514;14515;14516 14515 342 5139;7016 3 TAPPALPTGYDSEEEEESRPMSYDEKR KLPKKATKTAPPALPT PMSYDEKRQLSLDINK K T A K R Q 2 2 0 2 0 0 6 1 0 0 1 1 1 0 4 3 2 0 2 0 0 0 27 2 3083.3666 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A0G2JHN8;A0A140T9I1 H0Y6K2 628 654 BRD2 Bromodomain-containing protein 2 yes no 3;4 0.0014825 54.582 By MS/MS By MS/MS 3 3 166910000 84861000 82052000 6316 321 7045;7046 15921;15922;15923;15924;15925;15926 14517;14518;14519;14520;14521 14518 33 589;590 5 TAPRQEAIPDLEDSPPVSDSEEQQESAR KLHNESKKTAPRQEAI EEQQESARAVPEKSTA K T A A R A 3 2 0 3 0 3 5 0 0 1 1 0 0 0 4 4 1 0 0 1 0 0 28 1 3080.417 Q9BTC0 Q9BTC0 792 819 DIDO1 Death-inducer obliterator 1 yes yes 3 5.7937E-13 93.529 By MS/MS By matching 1 1 46369000 24877000 21492000 6317 2576 7047 15927;15928 14522 14522 5203;5204 1 TAPTALGITLSSSPTSTPELR ARGAIEERTAPTALGI PTSTPELRVDASTQKG R T A L R V 2 1 0 0 0 0 1 1 0 1 3 0 0 0 3 4 5 0 0 0 0 0 21 0 2099.111 F5H1U9;O75970 F5H1U9 342 362 MPDZ Multiple PDZ domain protein yes no 2;3 4.5188E-05 77.633 By MS/MS By MS/MS 2 2 35484000 18915000 16569000 6318 879 7048 15929;15930;15931;15932 14523;14524;14525;14526;14527 14523 1580;1581;1582 5 TAPTLSPEHWK SGPPELRKTAPTLSPE TLSPEHWKAVPPVSPE K T A W K A 1 0 0 0 0 0 1 0 1 0 1 1 0 0 2 1 2 1 0 0 0 0 11 0 1265.6404 Q96JM3 Q96JM3 400 410 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.0048375 69.345 By MS/MS By MS/MS 1 1 6146800 3420400 2726400 6319 2509 7049 15933;15934 14528;14529 14529 5061 2 TAQSPAMVGSPIRSPK GQKTKSPKTAQSPAMV GSPIRSPKTVSKEKKS K T A P K T 2 1 0 0 0 1 0 1 0 1 0 1 1 0 3 3 1 0 0 1 0 0 16 1 1625.8559 Q5VWG9 Q5VWG9 288 303 TAF3 Transcription initiation factor TFIID subunit 3 yes yes 3 0.014182 55.975 By matching By MS/MS 1 1 4478000 2827900 1650100 6320 2119 7050 15935;15936 14530 14530 4202;4203 0 TAQVPSPPR ITIDDPVRTAQVPSPP AQVPSPPRGKISNIVH R T A P R G 1 1 0 0 0 1 0 0 0 0 0 0 0 0 3 1 1 0 0 1 0 0 9 0 951.51378 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 949 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 2 0.0016711 133.91 By MS/MS By MS/MS 1 1 74575000 30156000 44419000 6321 725;968 7051 15937;15938 14531;14532;14533;14534;14535;14536;14537;14538;14539;14540 14534 1297 10 TAQVPSPPRGK ITIDDPVRTAQVPSPP VPSPPRGKISNIVHIS R T A G K I 1 1 0 0 0 1 0 1 0 0 0 1 0 0 3 1 1 0 0 1 0 0 11 1 1136.6302 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 951 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 2;3 9.782E-06 124.48 By MS/MS By MS/MS 2 2 81890000 37576000 44314000 6322 725;968 7052 15939;15940;15941;15942 14541;14542;14543;14544;14545;14546;14547;14548;14549;14550;14551 14548 1297 11 TARIASDEEIQGTKDAVIQDLER GFPKKASRTARIASDE AVIQDLERKLRFKEDL R T A E R K 3 2 0 3 0 2 3 1 0 3 1 1 0 0 0 1 2 0 0 1 0 0 23 2 2557.2984 Q8WX93 Q8WX93 888 910 PALLD Palladin yes yes 3;4 2.8001E-05 76.028 By MS/MS By MS/MS 2 2 29784000 14690000 15094000 6323 2411 7053 15943;15944;15945;15946 14552;14553 14552 4837;6980 2 TARKQSAQK IREAEVTRTARKQSAQ ARKQSAQKRVLLQASQ R T A Q K R 2 1 0 0 0 2 0 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 9 2 1016.5727 G3V1T4;P57740 G3V1T4 22 30 NUP107 Nuclear pore complex protein Nup107 yes no 3 0.029842 53.968 By MS/MS 1 33054000 0 33054000 6324 961 7054 15947 14554 14554 0 TASEGDGGAAAGAAAAGAR KCSSCRVRTASEGDGG GAAAAGARPVSVAGSP R T A A R P 9 1 0 1 0 0 1 5 0 0 0 0 0 0 0 1 1 0 0 0 0 0 19 0 1530.7023 Q9Y4H2 Q9Y4H2 363 381 IRS2 Insulin receptor substrate 2 yes yes 2 3.9874E-06 93.152 By MS/MS By MS/MS 1 1 6694700 3895300 2799400 6325 2921 7055 15948;15949 14555;14556;14557 14557 6074 3 TASESISNLSEAGSIK PPISNLTKTASESISN LSEAGSIKKGERELKI K T A I K K 2 0 1 0 0 0 2 1 0 2 1 1 0 0 0 5 1 0 0 0 0 0 16 0 1592.7893 F5H1T5;F6VGP8;F5H6A0;J3KP58;P30622 F5H1T5 191 206 CLIP1 CAP-Gly domain-containing linker protein 1 yes no 2 8.0626E-45 176.85 By MS/MS By MS/MS 2 2 28988000 19836000 9151400 6326 878 7056 15950;15951;15952;15953 14558;14559;14560;14561 14558 1576;1577;1578;1579 4 TASFSESR TSTPAPSRTASFSESR TASFSESRADEVAPAK R T A S R A 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 3 1 0 0 0 0 0 8 0 883.40356 P53396 P53396 453 460 ACLY ATP-citrate synthase yes yes 2 0.0046722 120.27 By MS/MS By MS/MS 1 1 109040000 53570000 55473000 6327 1761 7057 15954;15955 14562;14563;14564;14565;14566;14567;14568 14565 3325;3326 7 TASFSESRADEVAPAK TSTPAPSRTASFSESR ADEVAPAKKAKPAMPQ R T A A K K 4 1 0 1 0 0 2 0 0 0 0 1 0 1 1 3 1 0 0 1 0 0 16 1 1664.8006 P53396 P53396 453 468 ACLY ATP-citrate synthase yes yes 2;3 0.0002658 82.755 By MS/MS By MS/MS 2 2 550480000 312650000 237830000 6328 1761 7058 15956;15957;15958;15959 14569;14570;14571 14571 3325;3326 3 TASFSESRADEVAPAKK TSTPAPSRTASFSESR DEVAPAKKAKPAMPQD R T A K K A 4 1 0 1 0 0 2 0 0 0 0 2 0 1 1 3 1 0 0 1 0 0 17 2 1792.8955 P53396 P53396 453 469 ACLY ATP-citrate synthase yes yes 3 2.8615E-05 85.937 By MS/MS By MS/MS 1 1 947380000 535830000 411550000 6329 1761 7059 15960;15961 14572;14573 14573 3325;3326 2 TASGSSVTSLDGTR MTRLMRSRTASGSSVT VTSLDGTRSRSHTSEG R T A T R S 1 1 0 1 0 0 0 2 0 0 1 0 0 0 0 4 3 0 0 1 0 0 14 0 1337.6423 E5RJY1;E7ESM1;Q92597 E5RJY1 37 50 NDRG1 Protein NDRG1 yes no 2 2.3774E-27 171.11 By MS/MS By MS/MS 3 3 218890000 117740000 101150000 6330 702 7060;7061 15962;15963;15964;15965;15966;15967 14574;14575;14576;14577;14578 14575 1245;1246;1247;6410 5 TASISSSPSEGTPTVGSYGCTPQSLPK DSREHRPRTASISSSP CTPQSLPKFQHPSHEL R T A P K F 1 0 0 0 1 1 1 3 0 1 1 1 0 0 4 7 4 0 1 1 0 0 27 0 2695.2647 Q6PKG0 Q6PKG0 845 871 LARP1 La-related protein 1 yes yes 3 4.6929E-05 66.454 By MS/MS 1 10808000 0 10808000 6331 2162 7062 15968 14579 14579 4314;4315 1 TASLPGYGR ASHIPSSKTASLPGYG ASLPGYGRNGLHRPVS K T A G R N 1 1 0 0 0 0 0 2 0 0 1 0 0 0 1 1 1 0 1 0 0 0 9 0 920.47158 J3QSX6;F8W8M4;A0A0A0MRL6;O14639 J3QSX6 276 284 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.003054 93.258 By MS/MS By MS/MS 1 1 65895000 37898000 27997000 6332 189 7063 15969;15970 14580;14581 14581 338 2 TASLTSAASVDGNR MTRLSRSRTASLTSAA AASVDGNRSRSRTLSQ R T A N R S 3 1 1 1 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 0 0 14 0 1348.6583 G3V578;H0YJT9;A0A0A0MS87;Q9UN36 G3V578 243 256 NDRG2 Protein NDRG2 yes no 2 0.00081086 102.5 By MS/MS By MS/MS 1 1 84015000 44904000 39110000 6333 210 7064 15971;15972 14582;14583 14582 383;6280;6281 2 TASLVTR REHFATIRTASLVTRQ RTASLVTRQMQEHEQD R T A T R Q 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 7 0 746.42865 Q7L7X3 Q7L7X3 443 449 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 2 0.0064036 106.68 By MS/MS By MS/MS 1 1 11763000 6010800 5752200 6334 2201 7065 15973;15974 14584;14585;14586;14587 14587 4389 4 TASPFQCSSP TTQRCWMKTASPFQCS SPFQCSSP________ K T A S P - 1 0 0 0 1 1 0 0 0 0 0 0 0 1 2 3 1 0 0 0 0 0 10 0 1080.4546 B5LMG6;A0A087WV86;Q6PGQ7 B5LMG6 610 619 C13orf34;BORA Protein aurora borealis yes no 2 0.0029092 84.817 By MS/MS By MS/MS 1 1 7050200 4239400 2810800 6335 57 7066 15975;15976 14588;14589 14588 104 2 TASPPALPK NSEAKKRRTASPPALP ASPPALPKIKAETDSD R T A P K I 2 0 0 0 0 0 0 0 0 0 1 1 0 0 3 1 1 0 0 0 0 0 9 0 880.50182 Q13029 Q13029 641 649 PRDM2 PR domain zinc finger protein 2 yes yes 2 0.0029424 94.409 By MS/MS By MS/MS 1 1 4541500 2445200 2096300 6336 1893 7067 15977;15978 14590;14591 14590 3614 2 TASPPPPPK PSPPPKRRTASPPPPP ASPPPPPKRRASPSPP R T A P K R 1 0 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 9 0 890.48617 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 623 631 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2 0.0035174 106.16 By MS/MS By MS/MS 2 2 57581000 32068000 25513000 6337 442;1311 7068;7069 15979;15980;15981;15982 14592;14593;14594;14595;14596 14592 855;6339 5 TASPPPPPKR PSPPPKRRTASPPPPP SPPPPPKRRASPSPPP R T A K R R 1 1 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 10 1 1046.5873 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 623 632 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2;3 9.0417E-05 110.93 By MS/MS By MS/MS 3 4 126760000 66424000 60341000 6338 442;1311 7070;7071 15983;15984;15985;15986;15987;15988;15989 14597;14598;14599;14600;14601;14602;14603 14602 855;6339 7 TASQGPQTDSVIQNSENIK WQHFPRYRTASQGPQT IQNSENIKAYHSGEGH R T A I K A 1 0 2 1 0 3 1 1 0 2 0 1 0 0 1 3 2 0 0 1 0 0 19 0 2015.976 Q9NZN5;E9PMR6 Q9NZN5 1286 1304 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2;3 0.00015399 75.764 By MS/MS By MS/MS 2 2 59078000 33543000 25535000 6339 2770 7072 15990;15991;15992;15993 14604;14605;14606 14605 5688 3 TASRPAPLVQQLSPSLLPNSK KPANTLVKTASRPAPL PSLLPNSKSPREVPSP K T A S K S 2 1 1 0 0 2 0 0 0 0 4 1 0 0 4 4 1 0 0 1 0 0 21 1 2203.2325 Q9Y6X9 Q9Y6X9 684 704 MORC2 MORC family CW-type zinc finger protein 2 yes yes 3 1.9141E-08 88.571 By MS/MS By MS/MS 1 1 18834000 9108100 9726000 6340 2955 7073 15994;15995 14607;14608 14608 6142 2 TASRPDDIPDSPSSPK PVIPQKPRTASRPDDI PDSPSSPKVALLPPVL R T A P K V 1 1 0 3 0 0 0 0 0 1 0 1 0 0 4 4 1 0 0 0 0 0 16 1 1668.7955 Q5VZK9;A0A0U1RQQ1 Q5VZK9 1278 1293 LRRC16A Leucine-rich repeat-containing protein 16A yes no 2 0.029799 52.495 By matching By MS/MS 1 1 5750800 3211800 2539000 6341 2124 7074 15996;15997 14609 14609 1 TATADDKKLQFSLK RKKKVVHRTATADDKK KKLQFSLKKLGVNNIS R T A L K K 2 0 0 2 0 1 0 0 0 0 2 3 0 1 0 1 2 0 0 0 0 0 14 2 1564.8461 P20290 P20290 80 93 BTF3 Transcription factor BTF3 yes yes 3 0.0038361 100.73 By MS/MS By matching 1 1 14770000 7771400 6998900 6342 1609 7075 15998;15999 14610 14610 6682 1 TATCHSSSSPPIDAASAEPYGFR STSAVKEKTATCHSSS SAEPYGFRASVLFDTM K T A F R A 4 1 0 1 1 0 1 1 1 1 0 0 0 1 3 5 2 0 1 0 0 0 23 0 2408.0703 P46821 P46821 1811 1833 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 1.5083E-09 88.951 By MS/MS By matching 2 2 41728000 26413000 15315000 6343 1712 7076 16000;16001;16002;16003 14611;14612 14611 7614 2 TAVAPSAVNLADPRTPTAPAVNLAGAR AMNLASPRTAVAPSAV AVNLAGARTPAALAAL R T A A R T 8 2 2 1 0 0 0 1 0 0 2 0 0 0 4 1 3 0 0 3 0 0 27 1 2600.4034 Q9UQ35 Q9UQ35 2275 2301 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3;4 3.4184E-06 75.184 By MS/MS By MS/MS 2 2 91983000 51929000 40054000 6344 2877 7077 16004;16005;16006;16007 14613;14614;14615;14616 14615 7115;7116 4 TAVIPINGSPR MLLKEPYKTAVIPING IPINGSPRTPRRGQNR K T A P R T 1 1 1 0 0 0 0 1 0 2 0 0 0 0 2 1 1 0 0 1 0 0 11 0 1123.635 P06400 P06400 241 251 RB1 Retinoblastoma-associated protein yes yes 2 0.0044984 88.075 By MS/MS By MS/MS 3 3 93322000 48262000 45060000 6345 1530 7078;7079 16008;16009;16010;16011;16012;16013 14617;14618;14619;14620 14619 2818 4 TAVPSPVEAAAASDPAAAR HSLSSNARTAVPSPVE ASDPAAARNGLAEGTE R T A A R N 8 1 0 1 0 0 1 0 0 0 0 0 0 0 3 2 1 0 0 2 0 0 19 0 1750.885 Q147X3;J3KNC2 Q147X3 148 166 NAA30 N-alpha-acetyltransferase 30 yes no 2 0.00035569 75.669 By matching By MS/MS 1 1 6077400 3847200 2230200 6346 1959 7080 16014;16015 14621 14621 3809 1 TAVVVGTITDDVR KLPGRENKTAVVVGTI GTITDDVRVQEVPKLK K T A V R V 1 1 0 2 0 0 0 1 0 1 0 0 0 0 0 0 3 0 0 4 0 0 13 0 1344.7249 F8VUA6;G3V203;H0YHA7;J3QQ67;Q07020;F8VYV2;A0A075B7A0 F8VUA6 27 39 RPL18 60S ribosomal protein L18 yes no 2 0.0062479 78.653 By MS/MS 1 1594300 1594300 0 6347 918 7081 16016 14622 14622 1 TCFSPNRVIGLSSDLQQVGGASAR IGVDLIMKTCFSPNRV QVGGASARIQDALSTV K T C A R I 2 2 1 1 1 2 0 3 0 1 2 0 0 1 1 4 1 0 0 2 0 0 24 1 2519.2551 O00303 O00303 255 278 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 3 0.00065245 60.104 By MS/MS By matching 1 1 13962000 9655000 4307100 6348 1330 7082 16017;16018 14623 14623 2399;6589 1 TCLPKALLNLSNGR FREPSTGKTCLPKALL LLNLSNGRNDTIPVLL K T C G R N 1 1 2 0 1 0 0 1 0 0 4 1 0 0 1 1 1 0 0 0 0 0 14 1 1555.8504 F5H6Q4;Q9HBA0 F5H6Q4 193 206 TRPV4 Transient receptor potential cation channel subfamily V member 4 yes no 2 0.0090671 61.593 By matching By MS/MS 1 1 16622000 7850900 8770700 6349 893 7083 16019;16020 14624 14624 1601 1 TCNSPQNSTDSVSDIVPDSPFPGALGSDTR MPPSVTPRTCNSPQNS GALGSDTRTAGQPEGG R T C T R T 1 1 2 4 1 1 0 2 0 1 1 0 0 1 4 6 3 0 0 2 0 0 30 0 3120.3942 Q14694 Q14694 208 237 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 3 0.020564 48.227 By matching By MS/MS 1 1 23565000 12240000 11325000 6350 1957 7084 16021;16022 14625 14625 3803 1 TCPSLSPTSPLNNK EEEPSAKRTCPSLSPT PTSPLNNKGILSLPHQ R T C N K G 0 0 2 0 1 0 0 0 0 0 2 1 0 0 3 3 2 0 0 0 0 0 14 0 1514.7399 O75925 O75925 480 493 PIAS1 E3 SUMO-protein ligase PIAS1 yes yes 2 0.0023794 83.883 By MS/MS By MS/MS 1 3 14155000 3095300 11060000 6351 1450 7085;7086 16023;16024;16025;16026 14626;14627;14628;14629;14630 14630 2683;2684;2685;6640 5 TCSFGGFDLTNR LGSLSHGRTCSFGGFD GGFDLTNRSLHVGSNN R T C N R S 0 1 1 1 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 0 0 0 12 0 1373.6034 O94885;A0A1B0GWB9 O94885 405 416 SASH1 SAM and SH3 domain-containing protein 1 yes no 2 1.8453E-05 119.69 By MS/MS By MS/MS 1 1 33374000 18595000 14779000 6352 1467 7087 16027;16028 14631;14632 14631 2723 2 TCSLPDLSK ANNPKMLRTCSLPDLS CSLPDLSKLFRTLMDV R T C S K L 0 0 0 1 1 0 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 9 0 1019.4957 Q96PY6 Q96PY6 1050 1058 NEK1 Serine/threonine-protein kinase Nek1 yes yes 2 0.0044408 88.056 By MS/MS By MS/MS 1 1 60333000 32294000 28039000 6353 2526 7088 16029;16030 14633;14634 14633 5101 2 TCSLPDLSKLFR ANNPKMLRTCSLPDLS PDLSKLFRTLMDVPTV R T C F R T 0 1 0 1 1 0 0 0 0 0 3 1 0 1 1 2 1 0 0 0 0 0 12 1 1435.7493 Q96PY6 Q96PY6 1050 1061 NEK1 Serine/threonine-protein kinase Nek1 yes yes 2;3 0.00016097 114.87 By MS/MS By MS/MS 2 2 59420000 37696000 21724000 6354 2526 7089 16031;16032;16033;16034 14635;14636;14637;14638 14638 5101 4 TDALTSSPGR SPGRSSRRTDALTSSP ALTSSPGRDLPPFEDE R T D G R D 1 1 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1003.4934 P49736;C9J013;C9JZ21;F8WDM3 P49736 35 44 MCM2 DNA replication licensing factor MCM2 yes no 2 0.023709 64.224 By MS/MS By matching 1 1 4573600 1872000 2701700 6355 1726 7090 16035;16036 14639 14639 0 TDASSASSFLDSDELER KVGHVTERTDASSASS LDSDELERTGIDLGTT R T D E R T 2 1 0 3 0 0 2 0 0 0 2 0 0 1 0 5 1 0 0 0 0 0 17 0 1828.7963 G3XAC6;Q14498;H0Y4X3;A0A0U1RQW2;A0A0U1RQH7 G3XAC6 330 346 RBM39 RNA-binding protein 39 yes no 2 0.0020864 70.41 By MS/MS By MS/MS 3 3 11615000 5638600 5976600 6356 984 7091;7092 16037;16038;16039;16040;16041;16042 14640;14641;14642;14643 14641 1791;1792 4 TDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEAR EQPGDGERTDCEPVGL EAPSPEARDSKEDGRK R T D A R D 9 1 0 1 1 1 10 1 0 0 3 0 0 0 5 6 2 0 0 2 0 0 42 0 4310.9496 Q15424;Q14151 Q15424 307 348 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 yes no 3 0.0033501 40.535 By MS/MS By matching 1 1 53321000 36721000 16600000 6357 1990 7093 16043;16044 14644 14644 3885 1 TDENIDTPGTPK KEAWQSHRTDENIDTP IDTPGTPKTHSVPSAT R T D P K T 0 0 1 2 0 0 1 1 0 1 0 1 0 0 2 0 3 0 0 0 0 0 12 0 1286.599 A0A0U1RR74;B8ZZI9;Q6ULP2 A0A0U1RR74 141 152 AFTPH Aftiphilin yes no 2 2.6506E-06 125.03 By MS/MS By MS/MS 1 1 6720300 3534600 3185800 6358 349 7094 16045;16046 14645;14646 14646 6312 2 TDESSPVLSPR FHISSHSKTDESSPVL SSPVLSPRKPSHPVMD K T D P R K 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1186.583 Q8NA72 Q8NA72 101 111 POC5 Centrosomal protein POC5 yes yes 2 9.1205E-06 138.02 By MS/MS By MS/MS 1 1 8836900 4049100 4787800 6359 2329 7095 16047;16048 14647;14648 14647 4667 2 TDEVPAGGSRSEAEDEDDEDYVPYVPLR EPERKRARTDEVPAGG YVPYVPLRQRRQLLPG R T D L R Q 2 2 0 5 0 0 5 2 0 0 1 0 0 0 3 2 1 0 2 3 0 0 28 1 3109.3636 D6RD33;D6RGI7;J3KNN5;Q9UJV9 D6RD33 13 40 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 3 0.00020586 62.028 By MS/MS By MS/MS 2 2 108600000 55754000 52848000 6360 668 7096;7097 16049;16050;16051;16052 14649;14650;14651 14650 1194;1195 3 TDGFAEAIHSPQVAGVPR PTLVVPHRTDGFAEAI PQVAGVPRFRFGPPED R T D P R F 3 1 0 1 0 1 1 2 1 1 0 0 0 1 2 1 1 0 0 2 0 0 18 0 1850.9275 P12270 P12270 2146 2163 TPR Nucleoprotein TPR yes yes 3 6.7711E-07 107.18 By MS/MS By MS/MS 1 1 44031000 24910000 19121000 6361 1570 7098 16053;16054 14652;14653;14654;14655 14653 2886 4 TDGQLNYQAASPDEGALVNAAR CHTVMVDRTDGQLNYQ GALVNAARNFGFAFLA R T D A R N 5 1 2 2 0 2 1 2 0 0 2 0 0 0 1 1 1 0 1 1 0 0 22 0 2260.072 O43520 O43520 542 563 ATP8B1 Phospholipid-transporting ATPase IC yes yes 3 0.029117 41.31 By MS/MS 1 0 0 0 6362 1388 7099 16055 14656 14656 7523 1 TDGSISGDRQPVTVADYISR RRRNRGNRTDGSISGD TVADYISRAESQSRQR R T D S R A 1 2 0 3 0 1 0 2 0 2 0 0 0 0 1 3 2 0 1 2 0 0 20 1 2136.0447 P51116 P51116 598 617 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 2;3 1.6974E-09 101.75 By MS/MS By MS/MS 4 4 279890000 149150000 130740000 6363 1743 7100;7101 16056;16057;16058;16059;16060;16061;16062;16063 14657;14658;14659;14660;14661;14662 14659 3295;3296 6 TDKSILVSPTGPSR NMTAEFKKTDKSILVS VSPTGPSRVAFDPEQK K T D S R V 0 1 0 1 0 0 0 1 0 1 1 1 0 0 2 3 2 0 0 1 0 0 14 1 1456.7886 Q14684 Q14684 699 712 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.00011247 112.96 By MS/MS By MS/MS 1 1 4708900 2296900 2412100 6364 1955 7102 16064;16065 14663;14664 14663 3791;3792 2 TDKSSASAPDVDDPEAFPALA GRPNRGSRTDKSSASA PEAFPALA________ R T D L A - 5 0 0 4 0 0 1 0 0 0 1 1 0 1 3 3 1 0 0 1 0 0 21 1 2102.9644 Q8NC51 Q8NC51 388 408 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3 1.1579E-12 116.09 By MS/MS By MS/MS 2 2 709960000 396760000 313200000 6365 2335 7103 16066;16067;16068;16069 14665;14666;14667 14667 4680;4681;4682;6962 3 TDLNPDNLQGGDDLDPNYVLSSR YKPSDEHKTDLNPDNL PNYVLSSRVRTGRSIR K T D S R V 0 1 3 5 0 1 0 2 0 0 4 0 0 0 2 2 1 0 1 1 0 0 23 0 2517.1619 P12277;G3V4N7;G3V461 P12277 108 130 CKB Creatine kinase B-type yes no 3 0.0057465 51.777 By MS/MS By MS/MS 1 1 14604000 6266200 8338100 6366 1571 7104 16070;16071 14668;14669 14669 2 TDNMLSDQTPTPTR TLKFPSIKTDNMLSDQ DQTPTPTRFLKNCEEV K T D T R F 0 1 1 2 0 1 0 0 0 0 1 0 1 0 2 1 4 0 0 0 0 0 14 0 1575.7199 H9KVC5;Q02930 H9KVC5 44 57 CREB5 Cyclic AMP-responsive element-binding protein 5 yes no 2 0.0039649 92.773 By MS/MS By MS/MS 1 1 11021000 6822200 4198900 6367 1193 7105 16072;16073 14670;14671 14671 6553 2 TDQGILVTNQDACALASSVSSPVK LKQPGNGKTDQGILVT SSVSSPVKSKGKICLP K T D V K S 3 0 1 2 1 2 0 1 0 1 2 1 0 0 1 4 2 0 0 3 0 0 24 0 2460.2166 Q8IWI9;H3BP52;H3BTF4 Q8IWI9 36 59 MGA MAX gene-associated protein yes no 3 0.00047763 61.039 By matching By MS/MS 1 1 5796600 3500600 2296000 6368 2268 7106 16074;16075 14672 14672 4552;4553 1 TDRGGDSIGETPTPGASK SGWAETPRTDRGGDSI TPTPGASKRKSRWDET R T D S K R 1 1 0 2 0 0 1 4 0 1 0 1 0 0 2 2 3 0 0 0 0 0 18 1 1744.8228 O75533 O75533 316 333 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.024262 61.345 By MS/MS By MS/MS 1 1 5501100 1820600 3680500 6369 1443 7107 16076;16077 14673;14674 14673 2 TDSEKPFRGSQSPK KSDSFAPKTDSEKPFR FRGSQSPKRYKLRDDF K T D P K R 0 1 0 1 0 1 1 1 0 0 0 2 0 1 2 3 1 0 0 0 0 0 14 2 1562.7689 Q9Y2W1 Q9Y2W1 397 410 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.007224 63.062 By MS/MS By matching 1 1 22507000 11229000 11279000 6370 2897 7108 16078;16079 14675 14675 6038 1 TDSIGEKLGR GMSRPFVRTDSIGEKL SIGEKLGRYSSSEPPI R T D G R Y 0 1 0 1 0 0 1 2 0 1 1 1 0 0 0 1 1 0 0 0 0 0 10 1 1074.5669 Q7Z3U7 Q7Z3U7 1212 1221 MON2 Protein MON2 homolog yes yes 3 0.0087005 64.841 By MS/MS By MS/MS 1 1 4042800 2339700 1703200 6371 2213 7109 16080;16081 14676;14677 14676 4411 2 TDSPDMHEDT APPRKVARTDSPDMHE SPDMHEDT________ R T D D T - 0 0 0 3 0 0 1 0 1 0 0 0 1 0 1 1 2 0 0 0 0 0 10 0 1146.4135 Q9BW61 Q9BW61 93 102 DDA1 DET1- and DDB1-associated protein 1 yes yes 2 2.2742E-05 132.32 By MS/MS By MS/MS 2 1 38208000 24293000 13915000 6372 2588 7110 16082;16083;16084 14678;14679;14680;14681 14679 5233 4 TDSQSVRHSPIAPSSPSPQVLAQK FSTPTGSRTDSQSVRH SPQVLAQKYSLVAKQE R T D Q K Y 2 1 0 1 0 3 0 0 1 1 1 1 0 0 4 6 1 0 0 2 0 0 24 1 2516.2983 Q9NQS7 Q9NQS7 298 321 INCENP Inner centromere protein yes yes 3 0.018839 45.511 By MS/MS 1 6605000 0 6605000 6373 2712 7111 16085 14682 14682 5528;5529;5530;5531 1 TDSREDEISPPPPNPVVK NLQKAGTRTDSREDEI PPPNPVVKGRRRRGAI R T D V K G 0 1 1 2 0 0 2 0 0 1 0 1 0 0 5 2 1 0 0 2 0 0 18 1 1975.9851 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644 K7EMU2 75 92 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 2;3 1.0965E-19 133.23 By MS/MS By MS/MS 3 3 148720000 79027000 69697000 6374 1263 7112 16086;16087;16088;16089;16090;16091 14683;14684;14685;14686;14687;14688;14689;14690;14691;14692;14693 14684 2292;2293;6569 11 TDSREDEISPPPPNPVVKGR NLQKAGTRTDSREDEI PNPVVKGRRRRGAISA R T D G R R 0 2 1 2 0 0 2 1 0 1 0 1 0 0 5 2 1 0 0 2 0 0 20 2 2189.1077 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644 K7EMU2 75 94 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 3 0.0093306 52.569 By MS/MS 1 2127200 0 2127200 6375 1263 7113 16092 14694 14694 2292;2293;6569 1 TDSSPNQAR FSNHKELKTDSSPNQA DSSPNQARAQAALQAV K T D A R A 1 1 1 1 0 1 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 0 9 0 974.44174 K7ES59;A0A087WU68;A6NLN1;P26599 K7ES59 108 116 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2 0.0059677 83.081 By MS/MS 1 2411800 2411800 0 6376 42 7114 16093 14695 14695 72 1 TDSTSDGRPAWMR AETEKKTRTDSTSDGR DGRPAWMRTLHTTASN R T D M R T 1 2 0 2 0 0 0 1 0 0 0 0 1 0 1 2 2 1 0 0 0 0 13 1 1478.6572 Q14204 Q14204 4366 4378 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.0062195 73.927 By MS/MS 1 118890000 118890000 0 6377 1944 7115 16094 14696 14696 3750;6812 1 TDSVIIADQTPTPTR TLKFGPARTDSVIIAD DQTPTPTRFLKNCEEV R T D T R F 1 1 0 2 0 1 0 0 0 2 0 0 0 0 2 1 4 0 0 1 0 0 15 0 1613.8261 K7ELQ4;K7ESA4;P17544 K7ELQ4 42 56 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes no 2 1.0687E-19 141.97 By MS/MS By MS/MS 2 2 14613000 8736000 5877100 6378 1279 7116 16095;16096;16097;16098 14697;14698;14699 14697 6573 2 TDTGIVTVEQSPSSSK LKMKDDSKTDTGIVTV EQSPSSSKLKVMQTDE K T D S K L 0 0 0 1 0 1 1 1 0 1 0 1 0 0 1 4 3 0 0 2 0 0 16 0 1634.7999 Q8NFC6;H0Y9Y2 Q8NFC6 2895 2910 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 no no 2 0.0027315 68.173 By MS/MS By MS/MS 1 1 11210000 5335800 5874000 6379 2353;1048 7117 16099;16100 14700;14701 14700 1949;1950 2 TDTLASAMDPPQSRKR T D K R 2 2 0 2 0 1 0 0 0 0 1 1 1 0 2 2 2 0 0 0 0 0 16 2 1772.8839 REV__Q86UC2 yes yes 2 0.0055457 51.03 By MS/MS 1 20380000 20380000 0 + 6380 3003 7118 16101 14702 14702 391 6195;7147;7148 1 TDVSNFDEEFTGEAPTLSPPR FVPTLSGRTDVSNFDE APTLSPPRDARPLTAA R T D P R D 1 1 1 2 0 0 3 1 0 0 1 0 0 2 3 2 3 0 0 1 0 0 21 0 2308.0495 Q16512 Q16512 899 919 PKN1 Serine/threonine-protein kinase N1 yes yes 2 0.00090026 70.917 By MS/MS By MS/MS 1 1 9997600 5336900 4660700 6381 2015 7119 16102;16103 14703;14704 14703 3930 2 TDVSNFDEEFTGEAPTLSPPRDAR FVPTLSGRTDVSNFDE LSPPRDARPLTAAEQA R T D A R P 2 2 1 3 0 0 3 1 0 0 1 0 0 2 3 2 3 0 0 1 0 0 24 1 2650.2147 Q16512 Q16512 899 922 PKN1 Serine/threonine-protein kinase N1 yes yes 3 0.0005085 60.621 By matching By MS/MS 1 1 7021800 4000100 3021800 6382 2015 7120 16104;16105 14705 14705 3930 1 TDYEMDRQFLIEIMEINEK HGIEIPERTDYEMDRQ EIMEINEKLAEAESEA R T D E K L 0 1 1 2 0 1 4 0 0 3 1 1 2 1 0 0 1 0 1 0 0 0 19 1 2416.129 Q8IWL3 Q8IWL3 153 171 HSCB Iron-sulfur cluster co-chaperone protein HscB, mitochondrial yes yes 3 0.016165 40.432 By matching By MS/MS 1 1 6415500 4575300 1840200 6383 2269 7121 16106;16107 14706 14706 304 7786 1 TDYIPLLDVDEK VVGETVGKTDYIPLLD PLLDVDEKTGNSESKK K T D E K T 0 0 0 3 0 0 1 0 0 1 2 1 0 0 1 0 1 0 1 1 0 0 12 0 1419.7133 E7EVA0;P27816;H7C456;A0A0J9YVV8;A0A0J9YW37 E7EVA0 45 56 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.00071831 98.943 By MS/MS By MS/MS 1 1 7172800 3810200 3362700 6384 742 7122 16108;16109 14707;14708 14708 7370 2 TDYNASVSVPDSSGPER GKNIKALRTDYNASVS PDSSGPERILSISADI R T D E R I 1 1 1 2 0 0 1 1 0 0 0 0 0 0 2 4 1 0 1 2 0 0 17 0 1779.7911 P61978;Q5T6W2 P61978 70 86 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0021164 73.877 By MS/MS 1 11783000 0 11783000 6385 1788 7123 16110 14709 14709 1 TEAGAETRSPGKAEAESDALPDDTVIESEALPSDIAAEAR EAPPGETRTEAGAETR SDIAAEARAKTGGTVS R T E A R A 9 2 0 4 0 0 7 2 0 2 2 1 0 0 3 4 3 0 0 1 0 0 40 2 4068.9247 G3V529;Q9GZR7;F5GYL3 G3V529 236 275 DDX24 ATP-dependent RNA helicase DDX24 yes no 4 0.00052941 48.433 By MS/MS 1 18471000 18471000 0 6386 978 7124 16111 14710 14710 1781;1782;6490 1 TEAQDLCRASPEPPGPESSSR RAETTQARTEAQDLCR PGPESSSRWLDDLLAS R T E S R W 2 2 0 1 1 1 3 1 0 0 1 0 0 0 4 4 1 0 0 0 0 0 21 1 2270.0233 Q9C0C2 Q9C0C2 663 683 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 3.37E-14 118.37 By MS/MS By MS/MS 1 1 76486000 41377000 35109000 6387 2615 7125 16112;16113 14711;14712 14712 5307 2 TEARSSDEENGPPSSPDLDR VWGFKEKRTEARSSDE PSSPDLDRIAASMRAL R T E D R I 1 2 1 3 0 0 3 1 0 0 1 0 0 0 3 4 1 0 0 0 0 0 20 1 2157.941 Q96B36 Q96B36 198 217 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 3 0.0076907 50.397 By MS/MS By matching 1 1 16776000 9481400 7294500 6388 2460 7126 16114;16115 14713 14713 4956;4957;4958;6996 1 TEDSIRDYEDGMEVDTTPTVAGQFEDADVDH QYNMAGVRTEDSIRDY FEDADVDH________ R T E D H - 2 1 0 7 0 1 4 2 1 1 0 0 1 1 1 1 4 0 1 3 0 0 31 1 3456.4423 P54105;E9PMI6;J3KN38 P54105 207 237 CLNS1A Methylosome subunit pICln yes no 3;4 3.4596E-31 109.17 By MS/MS By MS/MS 2 3 515540000 196530000 319000000 6389 1766 7127;7128 16116;16117;16118;16119;16120 14714;14715;14716;14717 14715 223 3333;7641 4 TEEARPSPAPGPGTPTGTPTR AAGADSPKTEEARPSP TPTGTPTRTPSRTAPG K T E T R T 2 2 0 0 0 0 2 3 0 0 0 0 0 0 6 1 5 0 0 0 0 0 21 1 2076.0236 Q4KMP7 Q4KMP7 135 155 TBC1D10B TBC1 domain family member 10B yes yes 3 0.00059309 70.112 By MS/MS By MS/MS 1 1 26240000 13146000 13093000 6390 2047 7129 16121;16122 14718;14719 14719 6860 2 TEEIFYYYDTNTGK ATRTMNTRTEEIFYYY YYDTNTGKEGKLDIVM R T E G K E 0 0 1 1 0 0 2 1 0 1 0 1 0 1 0 0 3 0 3 0 0 0 14 0 1742.7675 Q6UX06 Q6UX06 450 463 OLFM4 Olfactomedin-4 yes yes 2;3 5.508E-21 163.12 By MS/MS By MS/MS 2 2 50510000 29257000 21253000 6391 2170 7130 16123;16124;16125;16126 14720;14721;14722;14723 14720 4 TEELIESPKLESSEGEIIQTVDR EHKDFTLKTEELIESP EIIQTVDRQSVKSPEV K T E D R Q 0 1 0 1 0 1 6 1 0 3 2 1 0 0 1 3 2 0 0 1 0 0 23 1 2601.3021 A0A0A0MTP7;F8VXG7;Q99590 A0A0A0MTP7 542 564 SCAF11 Protein SCAF11 yes no 3 0.00037341 65.454 By MS/MS By MS/MS 1 1 12197000 5720200 6476600 6392 251 7131 16127;16128 14724;14725;14726 14725 456 3 TEFLDLDNSPLSPPSPR KDKEEKKKTEFLDLDN PLSPPSPRTKSRTHTR K T E P R T 0 1 1 2 0 0 1 0 0 0 3 0 0 1 4 3 1 0 0 0 0 0 17 0 1883.9265 Q8NCF5 Q8NCF5 190 206 NFATC2IP NFATC2-interacting protein yes yes 2 1.3159E-36 164.69 By MS/MS By MS/MS 1 1 28911000 16372000 12538000 6393 2337 7132 16129;16130 14727;14728;14729 14728 4685 3 TEFLHSQNSLSPR PGDLAEERTEFLHSQN SQNSLSPRSSLSDEAP R T E P R S 0 1 1 0 0 1 1 0 1 0 2 0 0 1 1 3 1 0 0 0 0 0 13 0 1514.7478 F6RY50;Q96FS4 F6RY50 727 739 SIPA1 Signal-induced proliferation-associated protein 1 yes no 2 0.010643 64.798 By MS/MS By MS/MS 1 1 5272500 2491800 2780700 6394 901 7133 16131;16132 14730;14731 14730 1617;1618 2 TEGTDSPLSR PAEGIENRTEGTDSPL GTDSPLSRDWRPGSPG R T E S R D 0 1 0 1 0 0 1 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1061.4989 Q155Q3 Q155Q3 256 265 DIXDC1 Dixin yes yes 2 0.025869 60.691 By MS/MS 1 12364000 12364000 0 6395 1996 7134 16133 14732 14732 1 TEGTYDLPYWDR HWRNRKKKTEGTYDLP YDLPYWDRAGWWKGMK K T E D R A 0 1 0 2 0 0 1 1 0 0 1 0 0 0 1 0 2 1 2 0 0 0 12 0 1514.6678 Q96PD2 Q96PD2 561 572 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 yes yes 2 0.0013097 89.548 By MS/MS 1 1734100 0 1734100 6396 2522 7135 16134 14733 14733 7850 1 TEIIILATR EVRVTPTRTEIIILAT EIIILATRTQNVLGEK R T E T R T 1 1 0 0 0 0 1 0 0 3 1 0 0 0 0 0 2 0 0 0 0 0 9 0 1028.623 P23396;E9PL09;F2Z2S8;H0YF32;H0YCJ7;E9PPU1;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 46 54 RPS3 40S ribosomal protein S3 yes no 2 0.0066393 90.601 By MS/MS By matching 1 1 2756600 1889000 867610 6397 1622 7136 16135;16136 14734 14734 1 TEIKEEEDQPSTSATQSSPAPGQSK EERSTELKTEIKEEED SPAPGQSKKKIFKPEE K T E S K K 2 0 0 1 0 3 4 1 0 1 0 2 0 0 3 5 3 0 0 0 0 0 25 1 2631.2148 Q09472 Q09472 1021 1045 EP300 Histone acetyltransferase p300 yes yes 3 0.026183 40.668 By MS/MS By matching 1 1 10298000 5718000 4579700 6398 1870 7137 16137;16138 14735 14735 1 TELMQTLGSYGTIVLVR NEFPEDLRTELMQTLG YGTIVLVRINQGQMLV R T E V R I 0 1 0 0 0 1 1 2 0 1 3 0 1 0 0 1 3 0 1 2 0 0 17 0 1880.0077 E7ER60;O15056 E7ER60 256 272 SYNJ2 Synaptojanin-2 yes no 2 0.029547 41.695 By MS/MS 1 0 0 0 6399 726 7138 16139 14736 14736 7361 1 TELSPAQIK GVTLSMTRTELSPAQI ELSPAQIKQLLQNPPA R T E I K Q 1 0 0 0 0 1 1 0 0 1 1 1 0 0 1 1 1 0 0 0 0 0 9 0 985.54441 Q7Z3B4 Q7Z3B4 286 294 NUP54 Nucleoporin p54 yes yes 2 0.0032264 92.611 By MS/MS 1 411330000 411330000 0 6400 2210 7139 16140 14737 14737 4408 1 TENGTCPSPPQPLSPAAALGSGSAAAVPK PVRIQDIKTENGTCPS GSAAAVPKIESPDSSS K T E P K I 6 0 1 0 1 1 1 3 0 0 2 1 0 0 6 4 2 0 0 1 0 0 29 0 2732.3439 Q12948 Q12948 228 256 FOXC1 Forkhead box protein C1 yes yes 3 2.8125E-19 101.04 By MS/MS By MS/MS 1 1 35867000 20137000 15730000 6401 1887 7140 16141;16142 14738;14739 14739 3599;3600 2 TERTIQQNITEQASVMQK KEELNMSKTERTIQQN EQASVMQKRKTEKLKQ K T E Q K R 1 1 1 0 0 4 2 0 0 2 0 1 1 0 0 1 3 0 0 1 0 0 18 1 2104.0583 Q96JH7 Q96JH7 712 729 VCPIP1 Deubiquitinating protein VCIP135 yes yes 3 0.027135 41.554 By MS/MS 1 6821500 6821500 0 6402 2507 7141 16143 14740 14740 0 TESAYDWTSLSSSSIK NYQEALKRTESAYDWT SLSSSSIKSGSSSSSI R T E I K S 1 0 0 1 0 0 1 0 0 1 1 1 0 0 0 6 2 1 1 0 0 0 16 0 1760.8105 C9K0J5;Q70E73;C9J164 C9K0J5 572 587 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 2 9.9118E-05 94.122 By MS/MS By MS/MS 1 1 31878000 16688000 15190000 6403 626 7142 16144;16145 14741;14742 14742 7339 2 TESEVPPRPASPK ASAATKERTESEVPPR PPRPASPKVTRSPPET R T E P K V 1 1 0 0 0 0 2 0 0 0 0 1 0 0 4 2 1 0 0 1 0 0 13 1 1393.7201 Q9Y3L3 Q9Y3L3 534 546 SH3BP1 SH3 domain-binding protein 1 yes yes 2;3 0.0030159 85.837 By MS/MS By MS/MS 2 2 13763000 5377100 8385800 6404 2909 7143 16146;16147;16148;16149 14743;14744;14745 14743 6053 3 TESGMYACDLCDKTFQKSSSLLR LSRKKIKKTESGMYAC QKSSSLLRHKYEHTGK K T E L R H 1 1 0 2 2 1 1 1 0 0 3 2 1 1 0 4 2 0 1 0 0 0 23 2 2696.2244 A0A1B0GWI0;A0A1B0GVV8;A0A1B0GW50;A0JP08;A0A1B0GV02;O60315 A0A1B0GWI0 735 757 ZEB2 Zinc finger E-box-binding homeobox 2 yes no 3 0.029109 40.097 By MS/MS 1 0 0 0 6405 374 7144 16150 14746 14746 7256 1 TESLVIPSTR PPSGRITKTESLVIPS SLVIPSTRSEGKQAGR K T E T R S 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 2 2 0 0 1 0 0 10 0 1101.603 F8VW41;Q86VP3 F8VW41 384 393 PACS2 Phosphofurin acidic cluster sorting protein 2 yes no 2 1.724E-05 129.84 By MS/MS By MS/MS 1 1 4154700 2434700 1720000 6406 921 7145 16151;16152 14747;14748 14748 1655 2 TESPATAAETASEELDNR EPEPPSGRTESPATAA ASEELDNRSLEEILNS R T E N R S 4 1 1 1 0 0 4 0 0 0 1 0 0 0 1 2 3 0 0 0 0 0 18 0 1890.8443 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3 C9JWF0 39 56 SMC4 Structural maintenance of chromosomes protein 4 yes no 2;3 3.4358E-115 211.45 By MS/MS By MS/MS 2 2 131170000 59260000 71910000 6407 542 7146 16153;16154;16155;16156 14749;14750;14751;14752;14753;14754;14755;14756 14756 992;6366 8 TESVPSDINNPVDR LPLTRLRRTESVPSDI DINNPVDRAAEPHFGT R T E D R A 0 1 2 2 0 0 1 0 0 1 0 0 0 0 2 2 1 0 0 2 0 0 14 0 1541.7322 A8MY87;A0A0A0MQW1;Q8IVT5 A8MY87 139 152 KSR1 Kinase suppressor of Ras 1 yes no 2 0.0013586 85.976 By MS/MS By MS/MS 1 1 7763500 4027200 3736300 6408 165 7147 16157;16158 14757;14758 14757 295;6264 2 TETISFGSVSPGGVK HFESSTVKTETISFGS SVSPGGVKLEISTKEV K T E V K L 0 0 0 0 0 0 1 3 0 1 0 1 0 1 1 3 2 0 0 2 0 0 15 0 1464.746 A0A0A0MRA8;A0A0A0MSA4;A8K968;A0A0J9YY18;J3QS83;Q9Y2J2 A0A0A0MRA8 784 798 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 2 0.0026137 70.197 By MS/MS By MS/MS 1 1 5755300 2822000 2933300 6409 175;2891 7148 16159;16160 14759;14760;14761 14759 311 3 TEVALAKDMESPTKLDVTLAK KDMALATKTEVALAKD KLDVTLAKDMQPSMES K T E A K D 3 0 0 2 0 0 2 0 0 0 3 3 1 0 1 1 3 0 0 2 0 0 21 2 2259.2032 E7EVA0;P27816;H7C456 E7EVA0 287 307 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.00065817 70.837 By MS/MS By MS/MS 2 2 41168000 22232000 18936000 6410 742 7149;7150 16161;16162;16163;16164 14762;14763;14764 14762 86 1341;6428 3 TFAPLPEFEQEEDDGEVTEDSDEDFIQPR LTEIYSDRTFAPLPEF DEDFIQPRRKRLKSDE R T F P R R 1 1 0 5 0 2 7 1 0 1 1 0 0 3 3 1 2 0 0 1 0 0 29 0 3383.4477 H0Y612;Q9UPN9 H0Y612 846 874 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 3 5.5884E-23 105.19 By MS/MS By MS/MS 1 1 128570000 70041000 58530000 6411 1029 7151 16165;16166 14765;14766 14765 1916;6513 2 TFCGTPDYIAPEIIAYQPYGK MMDGVTTRTFCGTPDY IAYQPYGKSVDWWAYG R T F G K S 2 0 0 1 1 1 1 2 0 3 0 1 0 1 3 0 2 0 3 0 0 0 21 0 2403.1457 P17252;P05771;P05129 P17252 497 517 PRKCA;PRKCB;PRKCG Protein kinase C alpha type;Protein kinase C beta type;Protein kinase C gamma type yes no 2 1.8392E-09 105.9 By MS/MS By matching 1 1 14565000 7164200 7400400 6412 1593 7152 16167;16168 14767 14767 6677 1 TFLDKDAQRLSPIPEEVPK EKLEKSKKTFLDKDAQ PIPEEVPKSTLESEKP K T F P K S 1 1 0 2 0 1 2 0 0 1 2 2 0 1 3 1 1 0 0 1 0 0 19 2 2182.1634 Q96T23;H0YER1;H0YCN2 Q96T23 594 612 RSF1 Remodeling and spacing factor 1 yes no 3;4 1.7453E-06 98.684 By MS/MS By MS/MS 2 2 66161000 38854000 27308000 6413 2544 7153 16169;16170;16171;16172 14768;14769;14770 14770 5134 3 TFLEGDWTSPSK LLYSDRDRTFLEGDWT GDWTSPSKSSDRRNSL R T F S K S 0 0 0 1 0 0 1 1 0 0 1 1 0 1 1 2 2 1 0 0 0 0 12 0 1366.6405 Q8NDT2 Q8NDT2 544 555 RBM15B Putative RNA-binding protein 15B yes yes 2 0.00079501 104.94 By MS/MS By MS/MS 1 1 17362000 9416900 7945000 6414 2345 7154 16173;16174 14771;14772 14772 4705;4706 2 TFLESKEELSHSPEPCTK KVESTSPKTFLESKEE HSPEPCTKMTMRLRRN K T F T K M 0 0 0 0 1 0 4 0 1 0 2 2 0 1 2 3 2 0 0 0 0 0 18 1 2117.9939 P41229 P41229 290 307 KDM5C Lysine-specific demethylase 5C yes yes 3 3.3634E-06 98.292 By MS/MS By MS/MS 1 1 33566000 18606000 14960000 6415 1692 7155 16175;16176 14773;14774 14773 3107 2 TFNKDTVIIVSEPSEDEESQGLPTMAR CSNTVQEKTFNKDTVI QGLPTMARRNDDISEL K T F A R R 1 1 1 2 0 1 4 1 0 2 1 1 1 1 2 3 3 0 0 2 0 0 27 1 2992.4335 D6RAY8;Q9H4L7 D6RAY8 114 140 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 1.8657E-07 77.646 By MS/MS By MS/MS 2 2 233940000 140290000 93645000 6416 653 7156;7157 16177;16178;16179;16180 14775;14776;14777;14778 14777 73 1175;1176;1177 4 TFQARPLSADLTK AKPEVRRRTFQARPLS PLSADLTKLFSSSASS R T F T K L 2 1 0 1 0 1 0 0 0 0 2 1 0 1 1 1 2 0 0 0 0 0 13 1 1446.7831 Q9BY89 Q9BY89 501 513 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2;3 1.3267E-07 127.57 By MS/MS By MS/MS 2 2 20056000 13136000 6920100 6417 2604 7158 16181;16182;16183;16184 14779;14780;14781;14782 14780 5273 4 TFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIK EEKKSLKRTFQQIQEE LLTEELIKALQDLENA R T F I K A 1 0 0 4 0 4 5 2 0 2 3 1 0 1 4 3 2 0 2 0 0 0 34 0 3838.7585 Q9NQG5;A2A2M0 Q9NQG5 149 182 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 3 2.3035E-06 66.677 By MS/MS By matching 1 1 186220000 141530000 44698000 6418 2708 7159 16185;16186 14783 14783 5523;5524 1 TFSATVR PLPTRRTRTFSATVRA RTFSATVRASQGPVYK R T F V R A 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 2 0 0 1 0 0 7 0 780.413 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 50 56 CARHSP1 Calcium-regulated heat stable protein 1 yes no 2 0.022538 85.161 By MS/MS 1 369450000 369450000 0 6419 1122 7160 16187 14784 14784 2050 1 TFSDESNVL SVRPLLLRTFSDESNV FSDESNVL________ R T F V L - 0 0 1 1 0 0 1 0 0 0 1 0 0 1 0 2 1 0 0 1 0 0 9 0 1010.4557 Q8NB49;H7C113 Q8NB49 1124 1132 ATP11C Phospholipid-transporting ATPase IG yes no 1;2 0.00036676 153.97 By MS/MS By MS/MS 2 2 57086000 28727000 28359000 6420 2330 7161 16188;16189;16190;16191 14785;14786;14787 14787 4669 3 TFSDGLATR PSRQLVGRTFSDGLAT FSDGLATRTLQPPESP R T F T R T 1 1 0 1 0 0 0 1 0 0 1 0 0 1 0 1 2 0 0 0 0 0 9 0 966.47706 Q86UU1 Q86UU1 428 436 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 2 0.003043 94.82 By MS/MS By MS/MS 1 1 25958000 14301000 11657000 6421 2238 7162 16192;16193 14788;14789 14788 4482 2 TFSEPGDHPGMLTSGK SNGRSYKRTFSEPGDH PGMLTSGKRSHLESSS R T F G K R 0 0 0 1 0 0 1 3 1 0 1 1 1 1 2 2 2 0 0 0 0 0 16 0 1659.7563 Q9HA47 Q9HA47 251 266 UCK1 Uridine-cytidine kinase 1 yes yes 2;3 0.00022744 89.911 By MS/MS By MS/MS 2 2 28278000 16056000 12222000 6422 2683 7163 16194;16195;16196;16197 14790;14791;14792;14793 14790 5473 4 TFSEPGDHPGMLTSGKR SNGRSYKRTFSEPGDH GMLTSGKRSHLESSSR R T F K R S 0 1 0 1 0 0 1 3 1 0 1 1 1 1 2 2 2 0 0 0 0 0 17 1 1815.8574 Q9HA47 Q9HA47 251 267 UCK1 Uridine-cytidine kinase 1 yes yes 3 0.013269 45.916 By MS/MS 1 10741000 0 10741000 6423 2683 7164 16198 14794 14794 5473 1 TFSFSDDENKPPSPK QRRKRELRTFSFSDDE ENKPPSPKEIRIEVAE R T F P K E 0 0 1 2 0 0 1 0 0 0 0 2 0 2 3 3 1 0 0 0 0 0 15 1 1694.7788 Q9UHJ3 Q9UHJ3 763 777 SFMBT1 Scm-like with four MBT domains protein 1 yes yes 2 0.0017486 66.201 By matching By MS/MS 1 1 10216000 5408600 4807100 6424 2815 7165 16199;16200 14795 14795 5782;5783;5784 1 TFSLDAVPPDHSPR PLPWGRPRTFSLDAVP VPPDHSPRARSVAPLP R T F P R A 1 1 0 2 0 0 0 0 1 0 1 0 0 1 3 2 1 0 0 1 0 0 14 0 1537.7525 Q9BST9 Q9BST9 518 531 RTKN Rhotekin yes yes 2 0.0013586 85.976 By MS/MS By MS/MS 1 1 8772900 4797500 3975400 6425 2575 7166 16201;16202 14796;14797 14797 5202 2 TFSLTEVR PPPKLRRRTFSLTEVR TFSLTEVRGQVSESED R T F V R G 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 8 0 951.50255 O95239 O95239 799 806 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.0050029 114.86 By MS/MS By MS/MS 1 1 58029000 31194000 26835000 6426 1480 7167 16203;16204 14798;14799 14799 2738 2 TFSQHSQLIIHQR YECSECEKTFSQHSQL SQLIIHQRIHTGEKPY K T F Q R I 0 1 0 0 0 3 0 0 2 2 1 0 0 1 0 2 1 0 0 0 0 0 13 0 1593.8376 Q96NJ6 Q96NJ6 457 469 ZFP3 Zinc finger protein 3 homolog yes yes 2 0.010434 51.092 By MS/MS 1 13644000 0 13644000 6427 2520 7168 16205 14800 14800 5094;5095 1 TFSVYSSSR QSSDSSKRTFSVYSSS FSVYSSSRQQGRYAPS R T F S R Q 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 4 1 0 1 1 0 0 9 0 1032.4876 H0YCB7;H0YEE1;Q9UID3 H0YCB7 21 29 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes no 2 0.0022734 98.582 By MS/MS By MS/MS 1 1 8893500 4629000 4264500 6428 1059 7169 16206;16207 14801;14802 14801 7441 2 TFSWASVTSK QTVQEDLRTFSWASVT SWASVTSKNLPPSGAV R T F S K N 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 3 2 1 0 1 0 0 10 0 1112.5502 Q13283 Q13283 248 257 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 0.011142 70.089 By MS/MS By matching 1 1 2520700 1246200 1274500 6429 1909 7170 16208;16209 14803 14803 3660 1 TFSYIKNK KSGTKVSRTFSYIKNK TFSYIKNKMSSSKKSK R T F N K M 0 0 1 0 0 0 0 0 0 1 0 2 0 1 0 1 1 0 1 0 0 0 8 1 999.53893 Q12802;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2 Q12802 1748 1755 AKAP13 A-kinase anchor protein 13 yes no 2 0.016202 83.948 By MS/MS By MS/MS 1 1 8626500 4919900 3706700 6430 1877 7171 16210;16211 14804;14805 14805 3565 2 TFVNITPAEVGVLVGK VWAAVPGKTFVNITPA EVGVLVGKDRSSFYVN K T F G K D 1 0 1 0 0 0 1 2 0 1 1 1 0 1 1 0 2 0 0 4 0 0 16 0 1642.9294 P07737;I3L3D5 P07737 39 54 PFN1 Profilin-1 yes no 2 3.3662E-05 110.98 By MS/MS By MS/MS 1 1 8037300 4947800 3089500 6431 1538 7172 16212;16213 14806;14807 14806 2 TFWSPELKK SSSMNSIKTFWSPELK FWSPELKKERALRKDE K T F K K E 0 0 0 0 0 0 1 0 0 0 1 2 0 1 1 1 1 1 0 0 0 0 9 1 1134.6073 X6RM00;G8JLD3;X6RLX0;Q8IUD2;K7EPP6;A0A0U1RQM4;O15083 X6RM00 188 196 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 yes no 2 0.0038151 123.51 By MS/MS By MS/MS 1 1 11829000 5756300 6072400 6432 1002 7173 16214;16215 14808;14809 14809 1830 2 TGAIVDVPVGEELLGR KEGDIVKRTGAIVDVP VGEELLGRVVDALGNA R T G G R V 1 1 0 1 0 0 2 3 0 1 2 0 0 0 1 0 1 0 0 3 0 0 16 0 1623.8832 P25705;K7ERX7;K7EK77;K7EQH4;K7EJP1 P25705 134 149 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 2 0.00013128 108.35 By MS/MS By MS/MS 1 1 4506000 2352000 2154000 6433 1632 7174 16216;16217 14810;14811 14811 2 TGDLGIPPNPEDRSPSPEPIYNSEGK EDLTRKLRTGDLGIPP PIYNSEGKRLNTREFR R T G G K R 0 1 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 26 1 2765.3144 Q15637 Q15637 67 92 SF1 Splicing factor 1 yes yes 3 6.4656E-06 75.057 By MS/MS By MS/MS 2 1 206160000 107190000 98968000 6434 1997 7175 16218;16219;16220 14812;14813;14814;14815;14816;14817;14818;14819;14820 14812 3897;3898;3899;7721 9 TGDLGIPPNPEDRSPSPEPIYNSEGKR EDLTRKLRTGDLGIPP IYNSEGKRLNTREFRT R T G K R L 0 2 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 27 2 2921.4155 Q15637 Q15637 67 93 SF1 Splicing factor 1 yes yes 3;4 2.4894E-05 67.552 By MS/MS By MS/MS 6 9 488790000 236800000 251990000 6435 1997 7176 16221;16222;16223;16224;16225;16226;16227;16228;16229;16230;16231;16232;16233;16234;16235 14821;14822;14823;14824;14825;14826;14827;14828;14829;14830;14831;14832;14833;14834;14835;14836;14837;14838;14839;14840;14841 14833 3897;3898;3899;7721 17 TGGKEAASGTTPQKSR AAGMLSPKTGGKEAAS GTTPQKSRKPKKGAGN K T G S R K 2 1 0 0 0 1 1 3 0 0 0 2 0 0 1 2 3 0 0 0 0 0 16 2 1574.8012 Q13428;J3KQ96;E7ETY2 Q13428 1260 1275 TCOF1 Treacle protein yes no 3 0.010935 70.501 By matching By MS/MS 1 1 12004000 5289000 6715400 6436 1915 7177 16236;16237 14842 14842 1 TGHILHPEYLQPLPSTPVSPIELDAK VLKMLTARTGHILHPE SPIELDAKKSPLALLA R T G A K K 1 0 0 1 0 1 2 1 2 2 4 1 0 0 5 2 2 0 1 1 0 0 26 0 2851.512 Q96F45 Q96F45 84 109 ZNF503 Zinc finger protein 503 yes yes 3;4 4.8067E-33 122.94 By MS/MS By MS/MS 4 4 182150000 120070000 62085000 6437 2481 7178;7179 16238;16239;16240;16241;16242;16243;16244;16245 14843;14844;14845;14846;14847;14848;14849;14850 14847 5005;5006;7001 8 TGISDVFAK NKSAPELKTGISDVFA GISDVFAKNDLAVVDV K T G A K N 1 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 1 0 0 1 0 0 9 0 936.49165 P19338 P19338 325 333 NCL Nucleolin yes yes 2 0.012214 80.438 By MS/MS By MS/MS 1 1 3135600 1773000 1362600 6438 1604 7180 16246;16247 14851;14852 14851 2 TGKEYIPGQPPLSQSSDSSPTR LKAQYKEKTGKEYIPG SSDSSPTRNSEPAGLE K T G T R N 0 1 0 1 0 2 1 2 0 1 1 1 0 0 4 5 2 0 1 0 0 0 22 1 2331.1343 P07814;V9GYZ6 P07814 868 889 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 3 1.4827E-05 76.492 By MS/MS By MS/MS 1 1 33615000 17124000 16491000 6439 1539 7181 16248;16249 14853;14854 14853 2826;2827;2828;2829;2830 2 TGLEDPERYLFVDR ________________ ERYLFVDRAVIYNPAT R T G D R A 0 2 0 2 0 0 2 1 0 0 2 0 0 1 1 0 1 0 1 1 0 0 14 1 1708.842 P35580;E7ERA5 P35580 5 18 MYH10 Myosin-10 yes no 3 0.0018894 67.456 By MS/MS By matching 1 1 1955700 1076000 879710 6440 1671 7182 16250;16251 14855 14855 7593 1 TGLSARLSNGSFSAPSLTNSR ASPCSSPKTGLSARLS APSLTNSRGSVHTVSF K T G S R G 2 2 2 0 0 0 0 2 0 0 3 0 0 1 1 6 2 0 0 0 0 0 21 1 2122.0767 O94806 O94806 34 54 PRKD3 Serine/threonine-protein kinase D3 yes yes 3 0.010457 49.768 By matching By MS/MS 1 1 7214800 4066700 3148100 6441 1463 7183 16252;16253 14856 14856 2707;2708;2712 1 TGLYSKRAAAK DQEEPDLKTGLYSKRA YSKRAAAKSDDTSDDD K T G A K S 3 1 0 0 0 0 0 1 0 0 1 2 0 0 0 1 1 0 1 0 0 0 11 2 1164.6615 O94992 O94992 222 232 HEXIM1 Protein HEXIM1 yes yes 3 0.020232 51.092 By matching By MS/MS 1 1 1478200 339680 1138500 6442 1472 7184 16254;16255 14857 14857 2726;7538 0 TGMGSGSAGKEGGPFK TDLSLTPKTGMGSGSA GKEGGPFKALLRQQTQ K T G F K A 1 0 0 0 0 0 1 6 0 0 0 2 1 1 1 2 1 0 0 0 0 0 16 1 1466.6824 Q86YS7;H0YFE9 Q86YS7 317 332 C2CD5 C2 domain-containing protein 5 yes no 2 0.029599 52.569 By matching By MS/MS 1 1 5355600 2677100 2678600 6443 2258 7185 16256;16257 14858 14858 1 TGPPPISPSK ASALSSHRTGPPPISP PPPISPSKRKFSMEPG R T G S K R 0 0 0 0 0 0 0 1 0 1 0 1 0 0 4 2 1 0 0 0 0 0 10 0 979.53385 F8W708;E7ERW0;E7EQU6;E7EWF5;A0A075B6E4;A0A0A6YYI5;G5E9M7;Q14135;A0A096LP98;E7EUJ2;F8WBN7 F8W708 46 55 VGLL4 Transcription cofactor vestigial-like protein 4 yes no 2 0.0017303 97.163 By MS/MS By MS/MS 1 1 5703500 3564600 2138800 6444 5 7186 16258;16259 14859;14860 14859 8;9 2 TGPPPISPSKR ASALSSHRTGPPPISP PPISPSKRKFSMEPGD R T G K R K 0 1 0 0 0 0 0 1 0 1 0 1 0 0 4 2 1 0 0 0 0 0 11 1 1135.635 F8W708;E7ERW0;E7EQU6;E7EWF5;A0A075B6E4;A0A0A6YYI5;G5E9M7;Q14135;A0A096LP98;E7EUJ2;F8WBN7 F8W708 46 56 VGLL4 Transcription cofactor vestigial-like protein 4 yes no 3 0.019408 50.659 By MS/MS 1 0 0 0 6445 5 7187 16260 14861 14861 8;9 1 TGQAGSLSGSPKPFSPQLSAPITTK TASPASTKTGQAGSLS LSAPITTKTDKTSTTG K T G T K T 2 0 0 0 0 2 0 3 0 1 2 2 0 1 4 5 3 0 0 0 0 0 25 1 2456.2911 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 408 432 ZMYND8 Protein kinase C-binding protein 1 yes no 3 2.9441E-05 73.389 By MS/MS By MS/MS 3 3 65940000 49532000 16408000 6446 69 7188;7189 16261;16262;16263;16264;16265;16266 14862;14863;14864;14865 14862 120;121;122 4 TGRDLFSLDSEDPSPASPPLR KLEEQILRTGRDLFSL SPASPPLRSSGSSLFP R T G L R S 1 2 0 3 0 0 1 1 0 0 3 0 0 1 4 4 1 0 0 0 0 0 21 1 2256.1022 H3BTX0;Q9BTK6 H3BTX0 51 71 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes no 3 5.6244E-09 94.176 By MS/MS By MS/MS 1 1 11854000 6628600 5225100 6447 1143 7190 16267;16268 14866;14867 14866 2085;2086 2 TGRDLFSLDSEDPSPASPPLRSSGSSLFPR KLEEQILRTGRDLFSL SGSSLFPRQRKY____ R T G P R Q 1 3 0 3 0 0 1 2 0 0 4 0 0 2 5 8 1 0 0 0 0 0 30 2 3174.5582 H3BTX0;Q9BTK6 H3BTX0 51 80 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes no 4 0.0085752 52.329 By MS/MS 1 4977900 4977900 0 6448 1143 7191 16269 14868 14868 2085;2086 0 TGSAGEAFLSTIQK GYSKEHGRTGSAGEAF AFLSTIQKAAEVVASA R T G Q K A 2 0 0 0 0 1 1 2 0 1 1 1 0 1 0 2 2 0 0 0 0 0 14 0 1408.7198 A0A1B0GV70 A0A1B0GV70 175 188 yes yes 2 1.9163E-07 122.1 By MS/MS By MS/MS 1 1 4907200 2783900 2123400 6449 377 7192 16270;16271 14869;14870 14869 714 2 TGSCSELDACPSK KNSKSLCRTGSCSELD ELDACPSKISQPARGF R T G S K I 1 0 0 1 2 0 1 1 0 0 1 1 0 0 1 3 1 0 0 0 0 0 13 0 1410.5755 A0A1B0GUA8;Q9H1H9;H0Y9Z7 A0A1B0GUA8 1736 1748 KIF13A Kinesin-like protein KIF13A yes no 2 0.0013193 98.654 By MS/MS By MS/MS 1 1 10405000 5288500 5116000 6450 369 7193 16272;16273 14871;14872 14872 695 2 TGSDHTNPTSPLLVKPSDLLEENK MQEMELKRTGSDHTNP SDLLEENKINSSVKFA R T G N K I 0 0 2 2 0 0 2 1 1 0 4 2 0 0 3 3 3 0 0 1 0 0 24 1 2591.3079 E9PMG1;H0YDT0;Q96D71;H0YE73 E9PMG1 446 469 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 3 0.0015838 56.172 By matching By MS/MS 1 1 6193200 3241300 2951900 6451 828 7194 16274;16275 14873 14873 1484;6449 1 TGSDHTNPTSPLLVKPSDLLEENKINSSVK MQEMELKRTGSDHTNP NKINSSVKFASGNTVA R T G V K F 0 0 3 2 0 0 2 1 1 1 4 3 0 0 3 5 3 0 0 2 0 0 30 2 3219.6623 E9PMG1;H0YDT0;Q96D71;H0YE73 E9PMG1 446 475 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 4 6.5563E-05 65.056 By MS/MS By matching 1 1 15461000 12360000 3101400 6452 828 7195 16276;16277 14874 14874 1484;6449 1 TGSESSQTGTSTTSSR TQERERSRTGSESSQT GTSTTSSRSKSDQDAR R T G S R S 0 1 0 0 0 1 1 2 0 0 0 0 0 0 0 6 5 0 0 0 0 0 16 0 1572.6863 E7EX17;P23588 E7EX17 420 435 EIF4B Eukaryotic translation initiation factor 4B yes no 2 1.1467E-56 190.18 By MS/MS By MS/MS 1 1 32575000 12728000 19847000 6453 750 7196 16278;16279 14875;14876;14877;14878 14876 1367;6432 4 TGSGIGNLQR GSQTALYRTGSGIGNL SGIGNLQRTSSQRSTL R T G Q R T 0 1 1 0 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1001.5254 A0A0D9SF60 A0A0D9SF60 445 454 PKP4 yes yes 2 0.0059599 75.819 By MS/MS By MS/MS 1 1 9236000 5522600 3713500 6454 314 7197 16280;16281 14879;14880 14880 570 2 TGSGSPFAGNSPAR GTVKQTPKTGSGSPFA FAGNSPAREGEQDAAS K T G A R E 2 1 1 0 0 0 0 3 0 0 0 0 0 1 2 3 1 0 0 0 0 0 14 0 1304.6109 Q9UPT8;M0QY97 Q9UPT8 1265 1278 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 2 0.00080985 94.922 By MS/MS By MS/MS 2 2 23836000 11826000 12010000 6455 2870 7198;7199 16282;16283;16284;16285 14881;14882 14882 5924;5925;5926 2 TGSGSPFAGNSPAREGEQDAASLKDVFK GTVKQTPKTGSGSPFA ASLKDVFKGFDPTASP K T G F K G 4 1 1 2 0 1 2 4 0 0 1 2 0 2 2 4 1 0 0 1 0 0 28 2 2822.3471 Q9UPT8;M0QY97 Q9UPT8 1265 1292 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 3 0.0064837 48.773 By matching By MS/MS 1 1 16904000 8502900 8401100 6456 2870 7200 16286;16287 14883 14883 5924;5925;5926 1 TGSPGPELLFHEGQQK CGAYIYTKTGSPGPEL LFHEGQQKRFCNTTCL K T G Q K R 0 0 0 0 0 2 2 3 1 0 2 1 0 1 2 1 1 0 0 0 0 0 16 0 1723.8529 A6NL54;A6NHN7;A6NHB5;Q14202 A6NL54 464 479 ZMYM3 Zinc finger MYM-type protein 3 yes no 2 0.0061955 63.31 By MS/MS By matching 1 1 11072000 5669200 5402300 6457 416 7201 16288;16289 14884 14884 781 1 TGSPGPELLFHEGQQKR CGAYIYTKTGSPGPEL FHEGQQKRFCNTTCLG K T G K R F 0 1 0 0 0 2 2 3 1 0 2 1 0 1 2 1 1 0 0 0 0 0 17 1 1879.9541 A6NL54;A6NHN7;A6NHB5;Q14202 A6NL54 464 480 ZMYM3 Zinc finger MYM-type protein 3 yes no 3 0.0063756 50.358 By matching By MS/MS 1 1 10214000 5335500 4878800 6458 416 7202 16290;16291 14885 14885 781 1 TGSPTFVR THKGKPVKTGSPTFVR TGSPTFVRELRSRTFD K T G V R E 0 1 0 0 0 0 0 1 0 0 0 0 0 1 1 1 2 0 0 1 0 0 8 0 863.45012 Q9UPP1;B0QZZ4;Q5JPR8;B0QZZ2;B0QZZ3;B0QZE1 Q9UPP1 118 125 PHF8 Histone lysine demethylase PHF8 yes no 2 0.018868 73.841 By MS/MS By MS/MS 1 1 11229000 5990400 5238400 6459 2868 7203 16292;16293 14886;14887 14886 5914 2 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK GGFMAQGKTGSSSPPG SLQSDLNKLGVATVAK K T G N K L 0 0 1 2 0 2 0 5 0 0 4 2 1 0 5 7 1 0 0 0 0 0 30 1 2938.4342 F5GZ78;A0A1B0GTU4;P49023 F5GZ78 316 345 PXN Paxillin yes no 3 7.7797E-07 73.753 By MS/MS By MS/MS 1 1 77478000 69084000 8393800 6460 367 7204 16294;16295 14888;14889 14888 684;685 2 TGSTSSKEDDYESDAATIVQK VGSAQQVRTGSTSSKE DAATIVQKCLEIYDMI R T G Q K C 2 0 0 3 0 1 2 1 0 1 0 2 0 0 0 4 3 0 1 1 0 0 21 1 2231.0077 Q5T4S7 Q5T4S7 360 380 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2;3 0.00035614 72.883 By MS/MS By MS/MS 2 2 105250000 54816000 50432000 6461 2096 7205 16296;16297;16298;16299 14890;14891;14892 14892 4146;6878;6879 3 TGSVGIGNLQR GSQTALYRTGSVGIGN VGIGNLQRTSSQRSTL R T G Q R T 0 1 1 0 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1100.5938 Q99569 Q99569 445 455 PKP4 Plakophilin-4 yes yes 2 9.9418E-06 120.86 By MS/MS By MS/MS 1 1 19884000 12054000 7829200 6462 2552 7206 16300;16301 14893;14894 14893 5161 2 TGSYGALAEITASK TWRLGLRKTGSYGALA LAEITASKEGQKEKDT K T G S K E 3 0 0 0 0 0 1 2 0 1 1 1 0 0 0 2 2 0 1 0 0 0 14 0 1367.6933 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 443 456 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 1.0935E-05 119.54 By MS/MS By MS/MS 1 1 40268000 20596000 19672000 6463 1349 7207 16302;16303 14895;14896 14895 2457;6593 2 TGTGDIATCYSPR GEGHMPFRTGTGDIAT IATCYSPRTSTESFAP R T G P R T 1 1 0 1 1 0 0 2 0 1 0 0 0 0 1 1 3 0 1 0 0 0 13 0 1397.6245 Q9NZN5;E9PMR6 Q9NZN5 1317 1329 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2 2.0879E-10 137.39 By MS/MS By MS/MS 1 1 14337000 8151000 6185800 6464 2770 7208 16304;16305 14897;14898 14898 5689 2 TGTLQPWNSDSTLNSR YWTRSRRKTGTLQPWN SDSTLNSRQLEPRTET K T G S R Q 0 1 2 1 0 1 0 1 0 0 2 0 0 0 1 3 3 1 0 0 0 0 16 0 1775.8438 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 249 264 RACGAP1 Rac GTPase-activating protein 1 yes no 2 0.00011345 106.49 By MS/MS By MS/MS 1 1 21685000 12651000 9033400 6465 2628 7209 16306;16307 14899;14900 14899 5347;5348 2 TGTTKTSVEESR TSIPSAGKTGTTKTSV KTSVEESRTTRPSAGI K T G S R T 0 1 0 0 0 0 2 1 0 0 0 1 0 0 0 2 4 0 0 1 0 0 12 1 1294.6365 Q7Z5P9 Q7Z5P9 6098 6109 MUC19 Mucin-19 yes yes 2 0.019129 58.626 By MS/MS 1 3814400 3814400 0 6466 2222 7210 16308 14901 14901 4448 0 TGVAGEDMQDNSGTYGK IYQGFEKKTGVAGEDM DNSGTYGKIWEGSSKC K T G G K I 1 0 1 2 0 1 1 4 0 0 0 1 1 0 0 1 2 0 1 1 0 0 17 0 1728.7261 Q05655 Q05655 320 336 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2 3.2672E-31 164.22 By MS/MS By MS/MS 2 2 47335000 22554000 24780000 6467 1855 7211;7212 16309;16310;16311;16312 14902;14903;14904 14903 3494;6770;7668 3 TGVAGEDMQDNSGTYGKIWEGSSK IYQGFEKKTGVAGEDM KIWEGSSKCNINNFIF K T G S K C 1 0 1 2 0 1 2 5 0 1 0 2 1 0 0 3 2 1 1 1 0 0 24 1 2516.1125 Q05655 Q05655 320 343 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 3 0.0001184 71.174 By MS/MS By MS/MS 1 1 17004000 10572000 6431800 6468 1855 7213 16313;16314 14905;14906 14906 3494;6770;7668 2 TGVLAAVLASQPSIPR EVDEHTQKTGVLAAVL ASQPSIPRSVGKDKKA K T G P R S 3 1 0 0 0 1 0 1 0 1 2 0 0 0 2 2 1 0 0 2 0 0 16 0 1578.9093 E9PMG1;H0YDT0;Q96D71;H0YCR2;H0YE89 E9PMG1 665 680 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 2;3 0.00059171 76.329 By MS/MS By MS/MS 2 1 15597000 11762000 3835100 6469 828 7214 16315;16316;16317 14907;14908 14907 1485 2 TGVTSTSDSEEEGDDQEGEKKR SKRKNLAKTGVTSTSD DQEGEKKRKGGRNFQT K T G K R K 0 1 0 3 0 1 5 3 0 0 0 2 0 0 0 3 3 0 0 1 0 0 22 2 2383.0259 O75475 O75475 267 288 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 1.2298E-05 83.229 By MS/MS By MS/MS 2 2 346360000 174830000 171540000 6470 1440 7215 16318;16319;16320;16321 14909;14910 14909 2660;2661;2662;6630 2 TGYESGEYEMLGEGLGVK DRIGKTKRTGYESGEY LGEGLGVKETPQQKYQ R T G V K E 0 0 0 0 0 0 4 5 0 0 2 1 1 0 0 1 1 0 2 1 0 0 18 0 1917.8666 F8VRV7;F8VW18;F8W1I6;Q13561;H0YHL1;F8VX93 F8VRV7 79 96 DCTN2 Dynactin subunit 2 yes no 2 2.1937E-07 110.51 By MS/MS By MS/MS 2 2 20559000 11464000 9095400 6471 914 7216;7217 16322;16323;16324;16325 14911;14912;14913 14912 103 7410 3 TGYTLDVTTGQR KIKALLERTGYTLDVT LDVTTGQRKYGGPPPD R T G Q R K 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 0 4 0 1 1 0 0 12 0 1310.6466 F6UXX1;B7Z645;O60506;O43390 F6UXX1 131 142 SYNCRIP;HNRNPR Heterogeneous nuclear ribonucleoprotein Q;Heterogeneous nuclear ribonucleoprotein R yes no 2 0.0022108 98.943 By MS/MS By matching 1 1 2728700 1613000 1115800 6472 514 7218 16326;16327 14914 14914 1 THSLLYQPQKK EAPLIPQRTHSLLYQP LLYQPQKKVKSEGTDS R T H K K V 0 0 0 0 0 2 0 0 1 0 2 2 0 0 1 1 1 0 1 0 0 0 11 1 1341.7405 H0Y3V3;H0Y5C0;B1ALU1;B1ALU3;O95490 H0Y3V3 344 354 ADGRL2;LPHN2 Latrophilin-2 yes no 3 0.015047 47.844 By MS/MS 1 1555500 0 1555500 6473 463 7219 16328 14915 14915 7282 1 THSTSSSLGSGESPFSR MTRLARSRTHSTSSSL SGESPFSRSVTSNQSD R T H S R S 0 1 0 0 0 0 1 2 1 0 1 0 0 1 1 7 2 0 0 0 0 0 17 0 1722.7809 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 234 250 NDRG3 Protein NDRG3 yes no 2 2.5194E-05 98.572 By MS/MS By MS/MS 1 2 48999000 23155000 25844000 6474 947 7220 16329;16330;16331 14916;14917 14916 1717;6480 2 THTRVSVQR EFTDHLVKTHTRVSVQ HTRVSVQRTQAPAVAT K T H Q R T 0 2 0 0 0 1 0 0 1 0 0 0 0 0 0 1 2 0 0 2 0 0 9 1 1082.5945 H0YEN5;E9PQD7;P15880 H0YEN5 178 186 RPS2 40S ribosomal protein S2 yes no 3 0.01289 64.103 By matching By MS/MS 1 1 35040000 21385000 13655000 6475 838 7221 16332;16333 14918 14918 1 THTTALAGRSPSPASGR RSRSAAAKTHTTALAG SPSPASGRRGEGDAPF K T H G R R 3 2 0 0 0 0 0 2 1 0 1 0 0 0 2 3 3 0 0 0 0 0 17 1 1665.8547 Q9UQ35;I3L182;I3L4D8;I3L1I8;A0A087X1W1 Q9UQ35 286 302 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.028678 44.106 By MS/MS By matching 1 1 211300000 102370000 108930000 6476 2877 7222 16334;16335 14919 14919 6001;6002 1 THTTALAGRSPSPASGRR RSRSAAAKTHTTALAG PSPASGRRGEGDAPFS K T H R R G 3 3 0 0 0 0 0 2 1 0 1 0 0 0 2 3 3 0 0 0 0 0 18 2 1821.9558 Q9UQ35;I3L182;I3L4D8;I3L1I8;A0A087X1W1 Q9UQ35 286 303 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.019388 50.055 By matching By MS/MS 1 1 21081000 8067300 13014000 6477 2877 7223 16336;16337 14920 14920 6001;6002 1 TIAATPIQTLPQSQSTPK SQPATPTRTIAATPIQ PQSQSTPKRIDTPSLE R T I P K R 2 0 0 0 0 3 0 0 0 2 1 1 0 0 3 2 4 0 0 0 0 0 18 0 1881.0207 A0A0C4DG88;P14859 A0A0C4DG88 163 180 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 2 5.127E-06 100.41 By MS/MS By MS/MS 1 1 26151000 15773000 10378000 6478 285 7224 16338;16339 14921;14922 14921 507;508 2 TIAHSPTSFTESSSK TVEHDENRTIAHSPTS SFTESSSKESQNTAEI R T I S K E 1 0 0 0 0 0 1 0 1 1 0 1 0 1 1 5 3 0 0 0 0 0 15 0 1578.7526 Q03164 Q03164 2094 2108 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 2 0.0094234 60.937 By matching By MS/MS 1 1 35911000 17258000 18653000 6479 1846 7225 16340;16341 14923 14923 3472 1 TIAQDYGVLK PLVSDPKRTIAQDYGV AQDYGVLKADEGISFR R T I L K A 1 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 1 0 1 1 0 0 10 0 1106.5972 A0A0A0MSI0;Q06830 A0A0A0MSI0 111 120 PRDX1 Peroxiredoxin-1 yes no 2 0.00034039 112.41 By MS/MS By MS/MS 1 1 9097400 4164100 4933300 6480 214 7226 16342;16343 14924;14925 14925 2 TIASDSEEEAGKELSDK DKSGKREKTIASDSEE AGKELSDKKNEEKDLF K T I D K K 2 0 0 2 0 0 4 1 0 1 1 2 0 0 0 3 1 0 0 0 0 0 17 1 1807.8323 Q96ST2 Q96ST2 435 451 IWS1 Protein IWS1 homolog yes yes 2;3 3.6566E-36 168.42 By MS/MS By MS/MS 3 3 86944000 53535000 33409000 6481 2541 7227 16344;16345;16346;16347;16348;16349 14926;14927;14928;14929 14927 5127;5128 4 TICTFDSSGFESMSPIKETVSSR TSQKAKRRTICTFDSS IKETVSSRQKPQMAPP R T I S R Q 0 1 0 1 1 0 2 1 0 2 0 1 1 2 1 6 3 0 0 1 0 0 23 1 2565.1727 E9PEI0;Q69YH5 E9PEI0 908 930 CDCA2 Cell division cycle-associated protein 2 yes no 3 0.00022425 68.231 By MS/MS By MS/MS 1 1 20256000 11558000 8697900 6482 772 7228 16350;16351 14930;14931;14932 14932 1397;1398;1399 3 TIDLGAAAHYTGDKASPDQNASTHTPQSSVK KRTANPSKTIDLGAAA HTPQSSVKTSVPSSKS K T I V K T 5 0 1 3 0 2 0 2 2 1 1 2 0 0 2 4 4 0 1 1 0 0 31 1 3167.5119 Q14677 Q14677 284 314 CLINT1 Clathrin interactor 1 yes yes 3;4 1.3133E-10 80.171 By MS/MS By MS/MS 1 2 55251000 20886000 34365000 6483 1952 7229 16352;16353;16354 14933;14934 14934 3784;7707 2 TIETSPSLSR PKKVLDGKTIETSPSL ETSPSLSRMPNQHACK K T I S R M 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 3 2 0 0 0 0 0 10 0 1089.5666 H3BP78;F8W7R3;Q9NVI1 H3BP78 230 239 FANCI Fanconi anemia group I protein yes no 2 0.00041681 110.31 By MS/MS By MS/MS 1 1 56409000 29794000 26615000 6484 938 7230 16355;16356 14935;14936 14935 1697 2 TIGGGDDSFNTFFSETGAGK DGQMPSDKTIGGGDDS FSETGAGKHVPRAVFV K T I G K H 1 0 1 2 0 0 1 5 0 1 0 1 0 3 0 2 3 0 0 0 0 0 20 0 2006.8858 P68363;F5H5D3;Q9BQE3;Q71U36;Q6PEY2;Q13748;F8VQQ4;F8VVB9;F8VX09;F8VWV9;F8VRZ4;F8VS66;F8VRK0;F8VXZ7;F8W0F6 P68363 41 60 TUBA1B;TUBA1C;TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2;3 7.445E-13 113.25 By MS/MS By MS/MS 2 3 114360000 56566000 57799000 6485 1810 7231;7232 16357;16358;16359;16360;16361 14937;14938;14939;14940;14941 14937 3381;6749 5 TIKTVDLGISDLEDDC GLLTTGKRTIKTVDLG ISDLEDDC________ R T I D C - 0 0 0 4 1 0 1 1 0 2 2 1 0 0 0 1 2 0 0 1 0 0 16 1 1792.8401 F5H5U2;Q8NHQ9 F5H5U2 554 569 DDX55 ATP-dependent RNA helicase DDX55 yes no 2 1.1777E-44 176.25 By MS/MS By MS/MS 1 1 126450000 63984000 62462000 6486 890 7233 16362;16363 14942;14943;14944 14942 1598 3 TILMMGR LYLKPIQRTILMMGRY RTILMMGRYVEPIEDV R T I G R Y 0 1 0 0 0 0 0 1 0 1 1 0 2 0 0 0 1 0 0 0 0 0 7 0 820.42992 P13639 P13639 450 456 EEF2 Elongation factor 2 yes yes 2 0.029695 99.384 By MS/MS 1 0 0 0 6487 1575 7234 16364 14945 14945 1 TIPVQAFEVK QPSTRKAKTIPVQAFE PVQAFEVKLDVTLGDL K T I V K L 1 0 0 0 0 1 1 0 0 1 0 1 0 1 1 0 1 0 0 2 0 0 10 0 1130.6336 A0A0A0MTP6;O15357;F5GY16 A0A0A0MTP6 240 249 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 0.01525 83.045 By MS/MS 1 1098600 0 1098600 6488 250 7235 16365 14946 14946 1 TIQEVLEEQSEDEDR ARKQLPKRTIQEVLEE EQSEDEDREAKRKKEE R T I D R E 0 1 0 2 0 2 5 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 15 0 1818.8119 M0R0Q7;P18858 M0R0Q7 132 146 LIG1 DNA ligase;DNA ligase 1 yes no 2 0.00054876 85.469 By MS/MS By matching 1 1 10406000 5477300 4929100 6489 1316 7236 16366;16367 14947 14947 2370 1 TIQEVLEEQSEDEDREAK ARKQLPKRTIQEVLEE EDEDREAKRKKEEEEE R T I A K R 1 1 0 2 0 2 6 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 18 1 2146.9866 M0R0Q7;P18858 M0R0Q7 132 149 LIG1 DNA ligase;DNA ligase 1 yes no 2;3 3.6879E-06 103.01 By MS/MS By MS/MS 2 2 194790000 106950000 87835000 6490 1316 7237 16368;16369;16370;16371 14948;14949;14950;14951 14949 2370 4 TIQEVLEEQSEDEDREAKR ARKQLPKRTIQEVLEE DEDREAKRKKEEEEET R T I K R K 1 2 0 2 0 2 6 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 19 2 2303.0877 M0R0Q7;P18858 M0R0Q7 132 150 LIG1 DNA ligase;DNA ligase 1 yes no 3 0.024852 46.663 By MS/MS By matching 1 1 47252000 21515000 25737000 6491 1316 7238 16372;16373 14952 14952 2370 1 TISAQDTLAYATALLNEK STGKTFQRTISAQDTL ATALLNEKEQSGSSNG R T I E K E 4 0 1 1 0 1 1 0 0 1 3 1 0 0 0 1 3 0 1 0 0 0 18 0 1921.9997 Q9UPU5;A0A0U1RQI9 Q9UPU5 2559 2576 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes no 2 8.0336E-06 97.284 By MS/MS By matching 1 1 10002000 7731900 2269800 6492 2871 7239 16374;16375 14953 14953 5930 1 TISDGTISASK DYSQHIYRTISDGTIS DGTISASKQESGKMDA R T I S K Q 1 0 0 1 0 0 0 1 0 2 0 1 0 0 0 3 2 0 0 0 0 0 11 0 1078.5506 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 139 149 FNBP1L Formin-binding protein 1-like yes no 2 0.00067326 106.26 By MS/MS By MS/MS 1 1 25890000 13843000 12048000 6493 7 7240 16376;16377 14954;14955 14955 19 2 TISDGTISASKQESGK DYSQHIYRTISDGTIS ASKQESGKMDAKTTVG R T I G K M 1 0 0 1 0 1 1 2 0 2 0 2 0 0 0 4 2 0 0 0 0 0 16 1 1607.8002 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 139 154 FNBP1L Formin-binding protein 1-like yes no 2 0.00079534 82.349 By MS/MS By matching 1 1 13428000 7501300 5926800 6494 7 7241 16378;16379 14956 14956 19 1 TISDGTISASKQESGKMDAK DYSQHIYRTISDGTIS ESGKMDAKTTVGKAKG R T I A K T 2 0 0 2 0 1 1 2 0 2 0 3 1 0 0 4 2 0 0 0 0 0 20 2 2052.9997 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 139 158 FNBP1L Formin-binding protein 1-like yes no 3 0.0043869 58.427 By matching By MS/MS 1 1 12539000 5286800 7252600 6495 7 7242 16380;16381 14957 14957 19 1 TISINSPK LLPSEITRTISINSPK TISINSPKAQTVQAVR R T I P K A 0 0 1 0 0 0 0 0 0 2 0 1 0 0 1 2 1 0 0 0 0 0 8 0 858.48108 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 862 869 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 0.02047 72.096 By matching By MS/MS 1 1 18077000 9236000 8841100 6496 329 7243 16382;16383 14958 14958 616 1 TISINSPKAQTVQAVR LLPSEITRTISINSPK AQTVQAVRCVTSYTVE R T I V R C 2 1 1 0 0 2 0 0 0 2 0 1 0 0 1 2 2 0 0 2 0 0 16 1 1711.9581 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 862 877 PHRF1 PHD and RING finger domain-containing protein 1 yes no 3 0.00013365 85.808 By MS/MS By matching 1 1 15152000 8795500 6356900 6497 329 7244 16384;16385 14959 14959 616 1 TISNPEVVMK MPETSFTRTISNPEVV SNPEVVMKRRRQQKLE R T I M K R 0 0 1 0 0 0 1 0 0 1 0 1 1 0 1 1 1 0 0 2 0 0 10 0 1116.5849 A8MQ02;J3KN01;P55196;Q5TIG5;F8W9I4;E9PFY5 A8MQ02 173 182 MLLT4 Afadin yes no 2 0.00062011 108.98 By MS/MS By MS/MS 1 1 118830000 67844000 50983000 6498 431 7245 16386;16387 14960;14961 14961 820 2 TISNPEVVMKR MPETSFTRTISNPEVV NPEVVMKRRRQQKLEK R T I K R R 0 1 1 0 0 0 1 0 0 1 0 1 1 0 1 1 1 0 0 2 0 0 11 1 1272.686 A8MQ02;J3KN01;P55196;Q5TIG5;F8W9I4;E9PFY5 A8MQ02 173 183 MLLT4 Afadin yes no 2;3 0.00064526 109.16 By MS/MS By MS/MS 3 2 76198000 43785000 32412000 6499 431 7246;7247 16388;16389;16390;16391;16392 14962;14963;14964;14965 14963 48 820 4 TISPPTLGTLR FESSKFTRTISPPTLG PPTLGTLRSCFSWSGG R T I L R S 0 1 0 0 0 0 0 1 0 1 2 0 0 0 2 1 3 0 0 0 0 0 11 0 1154.6659 Q9UQ84 Q9UQ84 596 606 EXO1 Exonuclease 1 yes yes 2 0.0080334 72.289 By MS/MS By matching 1 1 4743400 2742100 2001300 6500 2879 7248 16393;16394 14966 14966 6010 1 TISPSTSNNIPLMR ERDEEAVKTISPSTSN SNNIPLMRVVQSIKHT K T I M R V 0 1 2 0 0 0 0 0 0 2 1 0 1 0 2 3 2 0 0 0 0 0 14 0 1529.7872 O94806;Q15139;F8WBA3 Q15139 389 402 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase no no 2 7.357E-05 117.08 By MS/MS By MS/MS 5 5 79810000 43239000 36571000 6501 1463;1978 7249;7250;7251;7252 16395;16396;16397;16398;16399;16400;16401;16402;16403;16404 14967;14968;14969;14970;14971;14972;14973;14974 14972 174 2714;2715;6645 7 TISQSSSLK TEHGSRKRTISQSSSL ISQSSSLKSSSNSNKE R T I L K S 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 4 1 0 0 0 0 0 9 0 949.50803 Q9UHB7 Q9UHB7 834 842 AFF4 AF4/FMR2 family member 4 yes yes 2 0.002931 108.31 By MS/MS By MS/MS 1 1 28840000 15997000 12843000 6502 2813 7253 16405;16406 14975;14976;14977;14978 14975 5778 4 TISTSDPAEVLVK QEKAFSLKTISTSDPA DPAEVLVKNSQPIKTL K T I V K N 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 2 0 0 2 0 0 13 0 1358.7293 E5RJU9;Q86UE4 E5RJU9 436 448 MTDH Protein LYRIC yes no 2 0.0025017 84.468 By MS/MS By MS/MS 1 1 11013000 5800600 5212900 6503 701 7254 16407;16408 14979;14980 14980 1243 2 TITLEVEPSDTIENVK FVKTLTGKTITLEVEP SDTIENVKAKIQDKEG K T I V K A 0 0 1 1 0 0 3 0 0 2 1 1 0 0 1 1 3 0 0 2 0 0 16 0 1786.92 M0R1V7;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5PY61;Q96C32;P62987;P62979;P0CG47;P0CG48;F5GZ39;J3QSA3 M0R1V7 12 27 UBA52;UBB;RPS27A;UBC Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 2 2.0387E-28 158.42 By MS/MS By MS/MS 1 1 47164000 26671000 20493000 6504 494 7255 16409;16410 14981;14982 14982 2 TITLEVEPSDTIENVKAK FVKTLTGKTITLEVEP TIENVKAKIQDKEGIP K T I A K I 1 0 1 1 0 0 3 0 0 2 1 2 0 0 1 1 3 0 0 2 0 0 18 1 1986.0521 M0R1V7;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5PY61;Q96C32;P62987;P62979;P0CG47;P0CG48;F5GZ39;J3QSA3 M0R1V7 12 29 UBA52;UBB;RPS27A;UBC Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 3 0.0035319 83.418 By MS/MS By matching 1 1 3884900 1561100 2323800 6505 494 7256 16411;16412 14983 14983 1 TITLVKSPISVPGGSALISNLGK TVVGGVTKTITLVKSP ALISNLGKVMSVVQTK K T I G K V 1 0 1 0 0 0 0 3 0 3 3 2 0 0 2 4 2 0 0 2 0 0 23 1 2251.3151 P51610;A6NEM2 P51610 660 682 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2;3 3.3703E-62 160.52 By MS/MS By MS/MS 2 2 168820000 114200000 54612000 6506 1745 7257 16413;16414;16415;16416 14984;14985;14986 14985 3301 3 TIVMGASFR YYKKFSYKTIVMGASF IVMGASFRNTGEIKAL K T I F R N 1 1 0 0 0 0 0 1 0 1 0 0 1 1 0 1 1 0 0 1 0 0 9 0 980.51134 F2Z393;P37837 F2Z393 231 239 TALDO1 Transaldolase yes no 2 0.0040816 89.403 By MS/MS By MS/MS 1 1 2403000 1187300 1215700 6507 854 7258 16417;16418 14987;14988 14987 1542 2 TIYVRDPTSNK QPVRNTERTIYVRDPT VRDPTSNKQQRPVPES R T I N K Q 0 1 1 1 0 0 0 0 0 1 0 1 0 0 1 1 2 0 1 1 0 0 11 1 1292.6725 P07948;E5RJ37 P07948 30 40 LYN Tyrosine-protein kinase Lyn yes no 2;3 2.4157E-09 157.34 By MS/MS By MS/MS 2 2 22363000 12762000 9600900 6508 1541 7259 16419;16420;16421;16422 14989;14990;14991;14992 14991 7552 4 TKDSGSISLQETR SISSFLSKTKDSGSIS SISLQETRRQKKTLKK K T K T R R 0 1 0 1 0 1 1 1 0 1 1 1 0 0 0 3 2 0 0 0 0 0 13 1 1420.7158 Q9H2G2 Q9H2G2 774 786 SLK STE20-like serine/threonine-protein kinase yes yes 2;3 0.0017081 101.3 By MS/MS By MS/MS 2 2 59257000 30077000 29179000 6509 2643 7260 16423;16424;16425;16426 14993;14994 14993 5383;5384;7048 2 TKECSVEKGTGDSLR PIETGSPKTKECSVEK KGTGDSLRESKVNGDD K T K L R E 0 1 0 1 1 0 2 2 0 0 1 2 0 0 0 2 2 0 0 1 0 0 15 2 1665.7992 Q5T757;Q05519 Q5T757 392 406 SRSF11 Serine/arginine-rich splicing factor 11 yes no 3 0.009156 58.29 By MS/MS By MS/MS 1 1 21603000 14519000 7083600 6510 1853 7261 16427;16428 14995;14996 14995 3489 2 TKEVYELLDSPGKVLLQSK GKKLYEGKTKEVYELL GKVLLQSKDQITAGNA K T K S K D 0 0 0 1 0 1 2 1 0 0 4 3 0 0 1 2 1 0 1 2 0 0 19 2 2146.1885 E9PBS1;P22234 E9PBS1 18 36 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 3 0.00055936 74 By MS/MS By MS/MS 1 1 11284000 7803300 3480900 6511 759 7262 16429;16430 14997;14998 14998 1383;7376 2 TKEYVSNDAAQSDDEEKLQSQPTDTDGGR LTLHIMRRTKEYVSND PTDTDGGRLKQKTTQL R T K G R L 2 1 1 5 0 3 3 2 0 0 1 2 0 0 1 3 3 0 1 1 0 0 29 2 3183.4076 Q5JSH3;H7BY83 Q5JSH3 392 420 WDR44 WD repeat-containing protein 44 yes no 3;4 2.7971E-06 68.834 By MS/MS By matching 2 1 102510000 72699000 29812000 6512 2073 7263 16431;16432;16433 14999;15000 15000 4071 2 TKFASDDEHDEHDENGATGPVK KVQFQGKKTKFASDDE NGATGPVKRAREETDK K T K V K R 2 0 1 4 0 0 3 2 2 0 0 2 0 1 1 1 2 0 0 1 0 0 22 1 2398.0309 P05455 P05455 362 383 SSB Lupus La protein yes yes 3;4 3.3627E-14 113.33 By MS/MS By MS/MS 3 3 114410000 53989000 60419000 6513 1526 7264;7265 16434;16435;16436;16437;16438;16439 15001;15002;15003;15004;15005 15002 12 2813 5 TKFASDDEHDEHDENGATGPVKR KVQFQGKKTKFASDDE GATGPVKRAREETDKE K T K K R A 2 1 1 4 0 0 3 2 2 0 0 2 0 1 1 1 2 0 0 1 0 0 23 2 2554.132 P05455 P05455 362 384 SSB Lupus La protein yes yes 3;4;5 7.8251E-10 90.758 By MS/MS By MS/MS 5 6 1117700000 371380000 746370000 6514 1526 7266;7267 16440;16441;16442;16443;16444;16445;16446;16447;16448;16449;16450 15006;15007;15008;15009;15010;15011;15012;15013;15014 15012 12 2813 9 TKGDEEEYWNSSKFK GLGLRMNRTKGDEEEY YWNSSKFKAFTFDDED R T K F K A 0 0 1 1 0 0 3 1 0 0 0 3 0 1 0 2 1 1 1 0 0 0 15 2 1846.8374 G3V4K3;Q9H9C1;G3V549 G3V4K3 30 44 VIPAS39 Spermatogenesis-defective protein 39 homolog yes no 3 0.0043022 57.788 By MS/MS By MS/MS 1 1 6065000 3532700 2532300 6515 974 7268 16451;16452 15015;15016 15015 7422 2 TKPIVKPQTSPEYGQGINPISR VKPRIKKKTKPIVKPQ QGINPISRLAQIQQAK K T K S R L 0 1 1 0 0 2 1 2 0 3 0 2 0 0 4 2 2 0 1 1 0 0 22 2 2409.3016 A0A087X1A5;O95793 A0A087X1A5 188 209 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 3 0.00035769 75.912 By matching By MS/MS 1 1 16100000 9981800 6118700 6516 136 7269 16453;16454 15017 15017 6255 1 TKPTQAAGPSSPQKPPTPEETK PQKQPQTKTKPTQAAG PPTPEETKAASPVLQE K T K T K A 2 0 0 0 0 2 2 1 0 0 0 3 0 0 6 2 4 0 0 0 0 0 22 2 2276.1648 F5H8D7;P18887 F5H8D7 406 427 XRCC1 DNA repair protein XRCC1 yes no 3 0.0018127 63.316 By MS/MS By MS/MS 2 2 62468000 29087000 33380000 6517 898 7270;7271 16455;16456;16457;16458 15018;15019;15020 15018 1611;1612;6472 3 TKSLIAQDHR KRGRSFIRTKSLIAQD SLIAQDHRSSLEEEQN R T K H R S 1 1 0 1 0 1 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 10 1 1167.636 H0YAN8;O15013;E9PB39 H0YAN8 25 34 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes no 3 0.028463 48.981 By MS/MS 1 0 0 0 6518 1051 7272 16459 15021 15021 1 TKSNSLSEQLAINTSPDAVK KSGEPALRTKSNSLSE NTSPDAVKAKLISRMA R T K V K A 2 0 2 1 0 1 1 0 0 1 2 2 0 0 1 4 2 0 0 1 0 0 20 1 2102.0855 A0A0A0MT60;Q5T1M5;X6RKW4 A0A0A0MT60 367 386 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 3 0.00020357 74.776 By MS/MS By MS/MS 1 1 12794000 9423500 3370200 6519 238 7273 16460;16461 15022;15023;15024 15023 430;431;432 3 TLDFDPLLSPASPK ACGATLKRTLDFDPLL LLSPASPKRRRCAPLS R T L P K R 1 0 0 2 0 0 0 0 0 0 3 1 0 1 3 2 1 0 0 0 0 0 14 0 1499.7872 Q53H80 Q53H80 10 23 AKIRIN2 Akirin-2 yes yes 2 2.167E-46 190.18 By MS/MS By MS/MS 2 2 79612000 45899000 33713000 6520 2059 7274;7275 16462;16463;16464;16465 15025;15026;15027;15028 15025 4046;4047 4 TLDFDPLLSPASPKR ACGATLKRTLDFDPLL LSPASPKRRRCAPLSA R T L K R R 1 1 0 2 0 0 0 0 0 0 3 1 0 1 3 2 1 0 0 0 0 0 15 1 1655.8883 Q53H80 Q53H80 10 24 AKIRIN2 Akirin-2 yes yes 2;3 0.00030622 82.01 By MS/MS By MS/MS 2 2 17029000 9581500 7448000 6521 2059 7276 16466;16467;16468;16469 15029;15030;15031;15032 15031 4046;4047 3 TLDSDEERPRPAPPDWSHMR PPGELYRRTLDSDEER PPDWSHMRGIISSDGE R T L M R G 1 3 0 3 0 0 2 0 1 0 1 0 1 0 4 2 1 1 0 0 0 0 20 2 2391.1026 Q9BW71 Q9BW71 527 546 HIRIP3 HIRA-interacting protein 3 yes yes 4 0.012832 42.716 By matching By MS/MS 1 1 72693000 28325000 44368000 6522 2589 7277 16470;16471 15033 15033 5243 1 TLDSGTSEIVKSPR SSLEEKQRTLDSGTSE SEIVKSPRIECSKTRR R T L P R I 0 1 0 1 0 0 1 1 0 1 1 1 0 0 1 3 2 0 0 1 0 0 14 1 1488.7784 Q9H501 Q9H501 187 200 ESF1 ESF1 homolog yes yes 3 0.003824 64.705 By matching By MS/MS 1 1 40890000 22139000 18751000 6523 2664 7278 16472;16473 15034 15034 5433 1 TLEEDEEELFK SLPEQEIKTLEEDEEE EDEEELFKMRAKLFRF K T L F K M 0 0 0 1 0 0 5 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1380.6297 C9JJ34;P43487;C9JDM3;F6WQW2 C9JJ34 40 50 RANBP1 Ran-specific GTPase-activating protein yes no 2 0.000265 113.62 By MS/MS By MS/MS 1 1 6377600 3076100 3301400 6524 594 7279 16474;16475 15035;15036 15035 2 TLEEVVMAEEEDEGTDRPGSPA VESKLRGRTLEEVVMA TDRPGSPA________ R T L P A - 2 1 0 2 0 0 6 2 0 0 1 0 1 0 2 1 2 0 0 2 0 0 22 1 2360.0326 F8WC89;A6NKF1 F8WC89 337 358 SAC3D1 SAC3 domain-containing protein 1 yes no 2;3 1.2854E-05 83.204 By MS/MS By MS/MS 6 6 125940000 72118000 53823000 6525 421 7280;7281 16476;16477;16478;16479;16480;16481;16482;16483;16484;16485;16486;16487 15037;15038;15039;15040;15041;15042;15043;15044;15045;15046;15047 15039 44 792 11 TLEPVKPPTVPNDYMTSPAR LGRNTPYKTLEPVKPP DYMTSPARLGSQHSPG K T L A R L 1 1 1 1 0 0 1 0 0 0 1 1 1 0 5 1 3 0 1 2 0 0 20 1 2212.1198 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 200 219 ABI1 Abl interactor 1 yes no 3 5.7012E-05 76.068 By MS/MS By MS/MS 2 2 35544000 20206000 15338000 6526 201 7282;7283 16488;16489;16490;16491 15048;15049;15050;15051 15050 22 367;6275;6276;7203 4 TLEPVRPPVVPNDYVPSPTR LGRHSPYRTLEPVRPP DYVPSPTRNMAPSQQS R T L T R N 0 2 1 1 0 0 1 0 0 0 1 0 0 0 6 1 2 0 1 4 0 0 20 1 2232.1903 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9 H7C3Q7 66 85 ABI2 Abl interactor 2 yes no 3 0.0043743 54.117 By MS/MS By matching 1 1 20788000 9056600 11732000 6527 275 7284 16492;16493 15052;15053;15054 15053 7221 3 TLETVPLER ________________ LETVPLERKKREKEQF K T L E R K 0 1 0 0 0 0 2 0 0 0 2 0 0 0 1 0 2 0 0 1 0 0 9 0 1056.5815 P22626;A0A087WUI2 P22626 4 12 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.005443 93.143 By matching By MS/MS 1 1 6114900 2797200 3317600 6528 1618 7285 16494;16495 15055 15055 1 TLFYSFKAEDTNSAQR IFHLYHKKTLFYSFKA EDTNSAQRWIEAMEDA K T L Q R W 2 1 1 1 0 1 1 0 0 0 1 1 0 2 0 2 2 0 1 0 0 0 16 1 1876.8955 B7ZM68;Q6ZNL6 B7ZM68 1152 1167 FGD5 FYVE, RhoGEF and PH domain-containing protein 5 yes no 2 0.03013 46.796 By MS/MS 1 0 0 0 6529 527 7286 16496 15056 15056 7307 1 TLGDFAAEYAK GIGSKAEKTLGDFAAE DFAAEYAKSNRSTCKG K T L A K S 3 0 0 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 11 0 1184.5714 P09874 P09874 109 119 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0081461 76.943 By matching By MS/MS 1 1 5497400 2979300 2518100 6530 1550 7287 16497;16498 15057 15057 1 TLGILGLGR MGTELNGKTLGILGLG LGILGLGRIGREVATR K T L G R I 0 1 0 0 0 0 0 3 0 1 3 0 0 0 0 0 1 0 0 0 0 0 9 0 898.56 Q5SZU1;O43175 Q5SZU1 113 121 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.019964 72.789 By MS/MS By matching 1 1 2483800 1640100 843690 6531 1373 7288 16499;16500 15058 15058 1 TLGTPTQPGSTPR LAFTPPIKTLGTPTQP TQPGSTPRISTMRPLA K T L P R I 0 1 0 0 0 1 0 2 0 0 1 0 0 0 3 1 4 0 0 0 0 0 13 0 1311.6783 Q8NFH5 Q8NFH5 270 282 NUP35 Nucleoporin NUP53 yes yes 2 0.0058435 98.676 By MS/MS By MS/MS 1 1 14297000 2129100 12168000 6532 2354 7289 16501;16502 15059;15060 15060 6966 2 TLHCEGTEINSDDEQESK PFKTKKIKTLHCEGTE SDDEQESKEVEETATA K T L S K E 0 0 1 2 1 1 4 1 1 1 1 1 0 0 0 2 2 0 0 0 0 0 18 0 2090.8699 Q9BPX3;H0Y9Z8 Q9BPX3 664 681 NCAPG Condensin complex subunit 3 yes no 2;3 5.2143E-14 127.2 By matching By MS/MS 2 2 129800000 57688000 72110000 6533 2567 7290 16503;16504;16505;16506 15061;15062 15062 5181 2 TLHSPPLQLQQR DNPFSPPRTLHSPPLQ PPLQLQQRSEKPPWYS R T L Q R S 0 1 0 0 0 3 0 0 1 0 3 0 0 0 2 1 1 0 0 0 0 0 12 0 1416.7837 F8W9A8;B7WPL9;Q6PFW1 F8W9A8 1125 1136 PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 yes no 3 0.0056226 71.529 By MS/MS 1 0 0 0 6534 511 7291 16507 15063 15063 950 1 TLIQNCGASTIR QALEVIPRTLIQNCGA NCGASTIRLLTSLRAK R T L I R L 1 1 1 0 1 1 0 1 0 2 1 0 0 0 0 1 2 0 0 0 0 0 12 0 1332.682 B4DUR8;P49368 B4DUR8 405 416 CCT3 T-complex protein 1 subunit gamma yes no 2 0.0076426 70.68 By MS/MS 1 2032600 0 2032600 6535 493 7292 16508 15064 15064 931 1 TLIYQMAPAVSK ATNGAESKTLIYQMAP QMAPAVSKTEDVWVRI K T L S K T 2 0 0 0 0 1 0 0 0 1 1 1 1 0 1 1 1 0 1 1 0 0 12 0 1320.7112 P25054 P25054 2642 2653 APC Adenomatous polyposis coli protein yes yes 2 0.028007 48.741 By MS/MS 1 1473300 0 1473300 6536 1628 7293 16509 15065 15065 7583 0 TLLEQLDDDQ GELEKRRRTLLEQLDD LEQLDDDQ________ R T L D Q - 0 0 0 3 0 2 1 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1188.551 O75400 O75400 948 957 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 2 3.8013E-05 145.72 By MS/MS By MS/MS 1 1 9867800 5322600 4545200 6537 1438 7294 16510;16511 15066;15067 15067 1 TLLPWDSDESPEASPGPPGPR KKGRTIVKTLLPWDSD SPGPPGPRRGAGAGGP K T L P R R 1 1 0 2 0 0 2 2 0 0 2 0 0 0 6 3 1 1 0 0 0 0 21 0 2204.0386 Q9UMN6 Q9UMN6 1026 1046 KMT2B Histone-lysine N-methyltransferase 2B yes yes 2 3.408E-05 77.078 By MS/MS By MS/MS 1 1 15085000 8812800 6271800 6538 2857 7295 16512;16513 15068;15069 15069 5885;5886 2 TLLSESSSQSSKSPSLSSK LDSLGRKKTLLSESSS KSPSLSSKQQHQPSAS K T L S K Q 0 0 0 0 0 1 1 0 0 0 3 2 0 0 1 10 1 0 0 0 0 0 19 1 1938.9746 Q9UPU5 Q9UPU5 1129 1147 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2;3 3.8806E-05 83.891 By MS/MS By matching 2 2 57630000 30108000 27522000 6539 2871 7296 16514;16515;16516;16517 15070;15071 15070 5931;5932 2 TLMLPLTEGSLR SMLLDLERTLMLPLTE PLTEGSLRLRADDEDS R T L L R L 0 1 0 0 0 0 1 1 0 0 4 0 1 0 1 1 2 0 0 0 0 0 12 0 1329.7326 Q7L4E1 Q7L4E1 267 278 FAM73B Protein FAM73B yes yes 2 0.00099031 102.73 By MS/MS By MS/MS 1 1 2511300 2511300 0 6540 2199 7297 16518;16519 15072;15073 15072 4380 2 TLNAETPKSSPLPAK LLDEEVSRTLNAETPK KSSPLPAKGRDPVEIL R T L A K G 2 0 1 0 0 0 1 0 0 0 2 2 0 0 3 2 2 0 0 0 0 0 15 1 1552.8461 Q7L2J0 Q7L2J0 208 222 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2;3 8.1011E-101 209.33 By MS/MS By MS/MS 4 4 127500000 63047000 64455000 6541 2198 7298;7299 16520;16521;16522;16523;16524;16525;16526;16527 15074;15075;15076;15077;15078;15079;15080 15074 4378;4379;6930 7 TLNMTTSPEEK TPRKRISKTLNMTTSP MTTSPEEKRKIIGDTF K T L E K R 0 0 1 0 0 0 2 0 0 0 1 1 1 0 1 1 3 0 0 0 0 0 11 0 1249.586 P49915 P49915 326 336 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 8.294E-06 123.26 By MS/MS By MS/MS 1 2 85019000 45836000 39183000 6542 1734 7300;7301 16528;16529;16530 15081;15082;15083 15082 217 3282;6725 2 TLNMTTSPEEKR TPRKRISKTLNMTTSP TTSPEEKRKIIGDTFV K T L K R K 0 1 1 0 0 0 2 0 0 0 1 1 1 0 1 1 3 0 0 0 0 0 12 1 1405.6871 P49915 P49915 326 337 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2;3 3.3482E-19 170.95 By MS/MS By MS/MS 2 2 35153000 18788000 16364000 6543 1734 7302 16531;16532;16533;16534 15084;15085;15086;15087 15086 3282;6725 4 TLNNDIMLIK RHPQYDRKTLNNDIML NNDIMLIKLSSRAVIN K T L I K L 0 0 2 1 0 0 0 0 0 2 2 1 1 0 0 0 1 0 0 0 0 0 10 0 1173.6427 A6XGL3;CON__P07477;E7EQ64;P07477;H0Y8D1;A0A087WW55 A6XGL3 93 102 PRSS1 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2 yes no 2 0.0025806 99.442 By MS/MS By MS/MS 3 2 81349000 46771000 34578000 + 6544 428 7303;7304;7305 16535;16536;16537;16538;16539 15088;15089;15090;15091;15092;15093 15089 46 6 TLQTDSIDSFETQRTPR RLFLDHDKTLQTDSID FETQRTPRKSNLDEEV K T L P R K 0 2 0 2 0 2 1 0 0 1 1 0 0 1 1 2 4 0 0 0 0 0 17 1 1993.9705 P06400 P06400 342 358 RB1 Retinoblastoma-associated protein yes yes 3 0.0062879 57.148 By MS/MS By matching 1 1 19650000 9348900 10301000 6545 1530 7306 16540;16541 15094 15094 6657 1 TLRFSLCSDNLEGISEGPSNR KLHGKPDKTLRFSLCS ISEGPSNRSNSVSSLD K T L N R S 0 2 2 1 1 0 2 2 0 1 3 0 0 1 1 4 1 0 0 0 0 0 21 1 2351.1176 Q14C86;H0Y7I9;C9IZ08;B4DGD8;A0A0A0MQV8 Q14C86 562 582 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 3 0.0072298 53.361 By MS/MS By matching 1 1 5219800 3065200 2154600 6546 1964 7307 16542;16543 15095 15095 3820;3821 1 TLSADASVNTLPVVVSR IIGPSKERTLSADASV TLPVVVSREPSVPASC R T L S R E 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 3 2 0 0 4 0 0 17 0 1727.9418 H0Y4V9;Q92615;H0Y641 H0Y4V9 132 148 LARP4B La-related protein 4B yes no 2 1.2204E-11 128.59 By MS/MS By MS/MS 1 1 14113000 10178000 3935700 6547 1020 7308 16544;16545 15096;15097 15096 1891 2 TLSASAAEVAPR EGLRLKERTLSASAAE SAAEVAPRAVSVGSQP R T L P R A 4 1 0 0 0 0 1 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 12 0 1171.6197 Q16825 Q16825 656 667 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 yes yes 2 0.0108 66.708 By matching By MS/MS 1 1 9002600 4071000 4931600 6548 2020 7309 16546;16547 15098 15098 3950 1 TLSASTQDLSPH WHLDKAPRTLSASTQD STQDLSPH________ R T L P H - 1 0 0 1 0 1 0 0 1 0 2 0 0 0 1 3 2 0 0 0 0 0 12 0 1255.6044 Q6P597 Q6P597 493 504 KLC3 Kinesin light chain 3 yes yes 2 0.0058 80.014 By MS/MS By MS/MS 4 3 43469000 22681000 20788000 6549 2156 7310;7311 16548;16549;16550;16551;16552;16553;16554 15099;15100;15101;15102;15103 15099 4295;4296;4297 2 TLSDDLDEAAKEFQEK VVMEPTMKTLSDDLDE AAKEFQEKHKKEVGKL K T L E K H 2 0 0 3 0 1 3 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 16 1 1837.8582 A0A087WV29;Q9H0A0 A0A087WV29 779 794 NAT10 N-acetyltransferase 10 yes no 2 0.00023727 100.23 By MS/MS By MS/MS 1 1 15356000 9655700 5700300 6550 55 7312 16555;16556 15104;15105 15105 102 2 TLSDESICSNR SPRRSLYRTLSDESIC DESICSNRRGSSFGSS R T L N R R 0 1 1 1 1 0 1 0 0 1 1 0 0 0 0 3 1 0 0 0 0 0 11 0 1280.5667 Q9P2F8 Q9P2F8 1486 1496 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 2 1.7785E-06 147.58 By MS/MS By MS/MS 1 1 14973000 7929500 7043300 6551 2790 7313 16557;16558 15106;15107 15106 5730 2 TLSDESIYNSQR TSRRALHRTLSDESIY ESIYNSQREHFFTSRA R T L Q R E 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 3 1 0 1 0 0 0 12 0 1411.6579 O43166;F5GYF8 O43166 1583 1594 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 4.1956E-07 126.32 By matching By MS/MS 1 1 19909000 11421000 8488400 6552 1372 7314 16559;16560 15108 15108 2514 1 TLSDESLCSGR SPQKGLQRTLSDESLC DESLCSGRREPSFASP R T L G R R 0 1 0 1 1 0 1 1 0 0 2 0 0 0 0 3 1 0 0 0 0 0 11 0 1223.5452 O60292;M0R2Q7 O60292 1542 1552 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 yes no 2 0.0025871 89.013 By MS/MS By MS/MS 1 1 10002000 5131300 4871200 6553 1401 7315 16561;16562 15109;15110 15110 2575 2 TLSDPPSPLPHGPPNK PPPPGHKRTLSDPPSP LPHGPPNKGAVPWGND R T L N K G 0 0 1 1 0 0 0 1 1 0 2 1 0 0 6 2 1 0 0 0 0 0 16 0 1652.8522 H0YBF7;A0A0A0MRE5;Q9ULH1 H0YBF7 658 673 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 2 0.0016313 70.47 By MS/MS By matching 1 1 11409000 7374600 4034300 6554 180 7316 16563;16564 15111 15111 320;321 1 TLSDVEDQKELASPVSPELR AKLPQTVKTLSDVEDQ SPVSPELRQKEVQMNF K T L L R Q 1 1 0 2 0 1 3 0 0 0 3 1 0 0 2 3 1 0 0 2 0 0 20 1 2212.1223 Q5T4S7 Q5T4S7 166 185 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 3 0.0062647 52.329 By MS/MS By MS/MS 1 1 8681500 4088400 4593100 6555 2096 7317 16565;16566 15112;15113 15112 4147 2 TLSDYNIQK GKQLEDGRTLSDYNIQ LSDYNIQK________ R T L Q K - 0 0 1 1 0 1 0 0 0 1 1 1 0 0 0 1 1 0 1 0 0 0 9 0 1080.5451 M0R1V7;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5PY61;Q96C32;P62987;P62979;P0CG47;P0CG48;M0R1M6;M0R2S1 M0R1V7 55 63 UBA52;UBB;RPS27A;UBC Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 2 0.0056211 110.31 By MS/MS By MS/MS 1 1 18832000 9743100 9088400 6556 494 7318 16567;16568 15114;15115 15115 2 TLSEVDYAPAGPAR CSVLQMAKTLSEVDYA YAPAGPARSALLPGPL K T L A R S 3 1 0 1 0 0 1 1 0 0 1 0 0 0 2 1 1 0 1 1 0 0 14 0 1445.7151 A0A0A0MTP6;O15357;H0YFZ4 A0A0A0MTP6 1063 1076 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 2.7381E-10 108.47 By MS/MS By MS/MS 1 1 133680000 72133000 61549000 6557 250 7319 16569;16570 15116;15117 15116 7215 1 TLSFDTSK SLKSPHRRTLSFDTSK TLSFDTSKMNQPDSIV R T L S K M 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 2 2 0 0 0 0 0 8 0 897.44436 Q7L804 Q7L804 275 282 RAB11FIP2 Rab11 family-interacting protein 2 yes yes 2 0.025088 67.207 By MS/MS By MS/MS 1 1 9754300 5010900 4743400 6558 2202 7320 16571;16572 15118;15119 15119 2 TLSKDDVNYK MASCVGSRTLSKDDVN SKDDVNYKMHFRMINE R T L Y K M 0 0 1 2 0 0 0 0 0 0 1 2 0 0 0 1 1 0 1 1 0 0 10 1 1181.5928 P48651;J3KNR6 P48651 9 18 PTDSS1 Phosphatidylserine synthase 1 yes no 2 0.017254 67.879 By MS/MS 1 2115900 0 2115900 6559 1719 7321 16573 15120 15120 3218 1 TLSMDKGF ELEHVTRRTLSMDKGF TLSMDKGF________ R T L G F - 0 0 0 1 0 0 0 1 0 0 1 1 1 1 0 1 1 0 0 0 0 0 8 1 897.4266 P17858 P17858 773 780 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 2 0.015239 88.134 By MS/MS By MS/MS 3 3 116460000 61158000 55303000 6560 1597 7322;7323 16574;16575;16576;16577;16578;16579 15121;15122;15123;15124;15125 15125 2934 5 TLSMIEEEIR KLRSRKQRTLSMIEEE SMIEEEIRAA______ R T L I R A 0 1 0 0 0 0 3 0 0 2 1 0 1 0 0 1 1 0 0 0 0 0 10 0 1219.6118 C9JVY5;Q9Y2D5 C9JVY5 767 776 AKAP2 A-kinase anchor protein 2 yes no 2 0.0011943 105.25 By MS/MS By MS/MS 3 3 37131000 21135000 15995000 6561 611 7324;7325 16580;16581;16582;16583;16584;16585 15126;15127;15128;15129;15130 15130 64 1118 5 TLSMPSGPSGK ASKFSLQKTLSMPSGP MPSGPSGKRWSKDSDC K T L G K R 0 0 0 0 0 0 0 2 0 0 1 1 1 0 2 3 1 0 0 0 0 0 11 0 1060.5223 H0YFN7;Q4ADV7 H0YFN7 927 937 RIC1 RAB6A-GEF complex partner protein 1 yes no 2 0.0038078 81.676 By matching By MS/MS 1 1 8027200 3722400 4304800 6562 1070 7326 16586;16587 15131 15131 1975 1 TLSNAEDYLDDEDSD KQGTDAVRTLSNAEDY YLDDEDSD________ R T L S D - 1 0 1 5 0 0 2 0 0 0 2 0 0 0 0 2 1 0 1 0 0 0 15 0 1700.6537 Q92882 Q92882 200 214 OSTF1 Osteoclast-stimulating factor 1 yes yes 2 0.0027987 68.277 By MS/MS By MS/MS 1 1 37568000 20283000 17285000 6563 2443 7327 16588;16589 15132;15133 15132 4918;4919;7828 2 TLSPEFNER RRTSQKKRTLSPEFNE LSPEFNERFEWELPLD R T L E R F 0 1 1 0 0 0 2 0 0 0 1 0 0 1 1 1 1 0 0 0 0 0 9 0 1091.5247 Q9BSJ8 Q9BSJ8 1032 1040 ESYT1 Extended synaptotagmin-1 yes yes 2 0.005854 83.397 By MS/MS By matching 1 1 2844600 1872500 972070 6564 2574 7328 16590;16591 15134 15134 5200 1 TLSPGRR KQSKSPSRTLSPGRRA RTLSPGRRAKSRSLER R T L R R A 0 2 0 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 7 1 785.45079 Q13523 Q13523 385 391 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 2 0.026509 67.494 By MS/MS 1 0 0 0 6565 1921 7329 16592 15135 15135 1 TLSPTPSAEGYQDVR QSLGESPRTLSPTPSA AEGYQDVRDRMIHRST R T L V R D 1 1 0 1 0 1 1 1 0 0 1 0 0 0 2 2 2 0 1 1 0 0 15 0 1619.7791 J3QSX6;F8W8M4;A0A0A0MRL6;O14639;H0Y7N6;F6XFR5 J3QSX6 87 101 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.00034225 97.45 By MS/MS By MS/MS 1 1 35361000 35361000 0 6566 189 7330 16593;16594 15136;15137 15136 339 2 TLSSFFTPR KPPRRAPKTLSSFFTP LSSFFTPRKPAVKKEV K T L P R K 0 1 0 0 0 0 0 0 0 0 1 0 0 2 1 2 2 0 0 0 0 0 9 0 1054.5447 M0R0Q7;P18858;B4E135;F5GZ28 M0R0Q7 226 234 LIG1 DNA ligase;DNA ligase 1 yes no 2 0.012842 93.839 By MS/MS By matching 1 1 2273600 993660 1280000 6567 1316 7331 16595;16596 15138 15138 1 TLSSPSNRPSGETSVPPPPAVGR QRPLRGAKTLSSPSNR PPPPAVGRMYPPRSPK K T L G R M 1 2 1 0 0 0 1 2 0 0 1 0 0 0 6 5 2 0 0 2 0 0 23 1 2289.1713 Q8WWM7 Q8WWM7 421 443 ATXN2L Ataxin-2-like protein yes yes 3 0.0096827 47.32 By MS/MS By matching 1 1 68174000 30725000 37449000 6568 2409 7332 16597;16598 15139 15139 4830;4831 1 TLSSSAQEDIIR LRNQGVVRTLSSSAQE SAQEDIIRWFKEEQLP R T L I R W 1 1 0 1 0 1 1 0 0 2 1 0 0 0 0 3 1 0 0 0 0 0 12 0 1318.6729 Q9H788 Q9H788 313 324 SH2D4A SH2 domain-containing protein 4A yes yes 2 8.6516E-28 180.61 By MS/MS By MS/MS 1 1 61346000 33380000 27966000 6569 2672 7333 16599;16600 15140;15141 15140 5448 2 TLSSSSMDLSR GTGLSDSRTLSSSSMD SSSMDLSRRSSLVG__ R T L S R R 0 1 0 1 0 0 0 0 0 0 2 0 1 0 0 5 1 0 0 0 0 0 11 0 1182.5551 Q9H0B6 Q9H0B6 606 616 KLC2 Kinesin light chain 2 yes yes 2 5.3057E-06 142.83 By MS/MS By MS/MS 1 1 67516000 38418000 29098000 6570 2625 7334 16601;16602 15142;15143 15142 5328 2 TLSTSDDVEDRENEK GLLISVIRTLSTSDDV VEDRENEKGRLEEAYE R T L E K G 0 1 1 3 0 0 3 0 0 0 1 1 0 0 0 2 2 0 0 1 0 0 15 1 1736.7701 Q96A65 Q96A65 30 44 EXOC4 Exocyst complex component 4 yes yes 2 0.0015739 81.327 By MS/MS By MS/MS 1 1 20249000 9409600 10839000 6571 2455 7335 16603;16604 15144;15145 15144 4944 2 TLSVAAAFNEDEDSEPEEMPPEAK TVPTLAPKTLSVAAAF EEMPPEAKMRMKNIGR K T L A K M 4 0 1 2 0 0 6 0 0 0 1 1 1 1 3 2 1 0 0 1 0 0 24 0 2605.1378 Q8WW12 Q8WW12 106 129 PCNP PEST proteolytic signal-containing nuclear protein yes yes 2;3 1.2035E-09 91.789 By MS/MS By MS/MS 4 4 422090000 273680000 148410000 6572 2405 7336;7337 16605;16606;16607;16608;16609;16610;16611;16612 15146;15147;15148;15149;15150;15151;15152;15153;15154;15155;15156 15152 320 4812;4813 11 TLSVAAAFNEDEDSEPEEMPPEAKMR TVPTLAPKTLSVAAAF MPPEAKMRMKNIGRDT K T L M R M 4 1 1 2 0 0 6 0 0 0 1 1 2 1 3 2 1 0 0 1 0 0 26 1 2892.2794 Q8WW12 Q8WW12 106 131 PCNP PEST proteolytic signal-containing nuclear protein yes yes 3 0.0017669 53.603 By MS/MS By matching 1 1 18147000 13485000 4662100 6573 2405 7338 16613;16614 15157 15157 4812;4813 1 TLTDEVNSPDSDRR RRKKISAKTLTDEVNS NSPDSDRRDKKGGNYK K T L R R D 0 2 1 3 0 0 1 0 0 0 1 0 0 0 1 2 2 0 0 1 0 0 14 1 1603.7438 F8VXC8;Q8TAQ2 F8VXC8 276 289 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2;3 7.5812E-05 117.48 By MS/MS By MS/MS 2 2 168770000 94182000 74584000 6574 925 7339 16615;16616;16617;16618 15158;15159;15160 15160 1664 3 TLTEPSVDFNHSDDFTPISTVQK KTSNRRIRTLTEPSVD TPISTVQKTLQLETSF R T L Q K T 0 0 1 3 0 1 1 0 1 1 1 1 0 2 2 3 4 0 0 2 0 0 23 0 2577.2235 Q6R327 Q6R327 1133 1155 RICTOR Rapamycin-insensitive companion of mTOR yes yes 3 0.014851 48.204 By MS/MS By MS/MS 1 1 14203000 7807600 6395700 6575 2165 7340 16619;16620 15161;15162 15162 2 TLTGDVKTSPPR KRSEGEEKTLTGDVKT DVKTSPPRTAPKKQL_ K T L P R T 0 1 0 1 0 0 0 1 0 0 1 1 0 0 2 1 3 0 0 1 0 0 12 1 1270.6881 H3BSX7;H3BNB8;H3BVH0;H3BRV2;H3BM79;Q9H8T0 H3BSX7 22 33 AKTIP AKT-interacting protein yes no 2;3 0.0063783 84.892 By MS/MS By MS/MS 2 3 12523000 9032800 3490200 6576 1112 7341 16621;16622;16623;16624;16625 15163;15164;15165;15166 15166 2039;6537 4 TLTRTSQETADVK AGERLRSRTLTRTSQE SQETADVKASVLLGSR R T L V K A 1 1 0 1 0 1 1 0 0 0 1 1 0 0 0 1 4 0 0 1 0 0 13 1 1448.7471 H3BVG0;Q8N1F7;H3BNN5;H3BV11;H3BRI8;H3BM93 H3BVG0 47 59 NUP93 Nuclear pore complex protein Nup93 yes no 2 0.0018933 110.25 By MS/MS By MS/MS 1 1 25190000 10992000 14198000 6577 1147 7342 16626;16627 15167;15168 15168 2092;6543 2 TLVITSTPASPNR QAEVTALKTLVITSTP STPASPNRELHPQLLS K T L N R E 1 1 1 0 0 0 0 0 0 1 1 0 0 0 2 2 3 0 0 1 0 0 13 0 1355.7409 E9PK89;Q8TBN0 E9PK89 206 218 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A yes no 2 0.0013062 100.54 By MS/MS By MS/MS 1 1 5478800 3288000 2190800 6578 813 7343 16628;16629 15169;15170 15169 1456 2 TLVLDFETEGERNSPNPR GFPLDSPKTLVLDFET ERNSPNPRSVRIPSPN K T L P R S 0 2 2 1 0 0 3 1 0 0 2 0 0 1 2 1 2 0 0 1 0 0 18 1 2073.0127 Q5VUA4 Q5VUA4 2078 2095 ZNF318 Zinc finger protein 318 yes yes 3 0.00012004 78.661 By MS/MS 1 5173000 5173000 0 6579 2116 7344 16630 15171 15171 4198 1 TLVLSNLSYSATEETLQEVFEK STWSGESKTLVLSNLS TLQEVFEKATFIKVPQ K T L E K A 1 0 1 0 0 1 4 0 0 0 4 1 0 1 0 3 3 0 1 2 0 0 22 0 2500.2585 P19338;H7BY16 P19338 487 508 NCL Nucleolin yes no 2 0.00162 69.878 By matching By MS/MS 1 1 7488900 2816900 4672000 6580 1604 7345 16631;16632 15172 15172 1 TLVLSSSPTSPTQEPLPGGK QAEVAALKTLVLSSSP QEPLPGGKTPFKKGHT K T L G K T 0 0 0 0 0 1 1 2 0 0 3 1 0 0 4 4 3 0 0 1 0 0 20 0 1995.0524 Q96QF0;H0YI02;J3KPG1 Q96QF0 257 276 RAB3IP Rab-3A-interacting protein yes no 2 0.021635 48.704 By matching By MS/MS 1 1 8299200 4482900 3816200 6581 2531 7346 16633;16634 15173 15173 1 TLYSFFSPSPAR ________________ FFSPSPARKRHAPSPE K T L A R K 1 1 0 0 0 0 0 0 0 0 1 0 0 2 2 3 1 0 1 0 0 0 12 0 1371.6823 P13051 P13051 6 17 UNG Uracil-DNA glycosylase yes yes 2 6.1628E-07 121.6 By MS/MS By MS/MS 2 2 10614000 6399500 4214300 6582 1574 7347 16635;16636;16637;16638 15174;15175;15176;15177 15174 2894;7565 4 TMDAKNGQTMNEK NSYQAKKKTMDAKNGQ NGQTMNEKQLFHGTDA K T M E K Q 1 0 2 1 0 1 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 0 13 1 1466.6494 Q460N5 Q460N5 1666 1678 PARP14 Poly [ADP-ribose] polymerase 14 yes yes 2 0.029029 41.644 By MS/MS 1 0 0 0 6583 2041 7348 16639 15178 15178 1 TMFAQVESDDEEAKNEPEWK AYSKTQPKTMFAQVES AKNEPEWKKRKI____ K T M W K K 2 0 1 2 0 1 5 0 0 0 0 2 1 1 1 1 1 1 0 1 0 0 20 1 2382.0322 Q9NW82 Q9NW82 631 650 WDR70 WD repeat-containing protein 70 yes yes 2;3 0.0033527 66.285 By MS/MS By MS/MS 3 3 119160000 68879000 50279000 6584 2742 7349;7350 16640;16641;16642;16643;16644;16645 15179;15180;15181 15179 5612 2 TMIISPERLDPFADGGKTPDPK DEYKKHRRTMIISPER GGKTPDPKMNARTYMD R T M P K M 1 1 0 3 0 0 1 2 0 2 1 2 1 1 4 1 2 0 0 0 0 0 22 2 2384.2046 O75533 O75533 125 146 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.0095244 49.528 By matching By MS/MS 2 2 32342000 17174000 15167000 6585 1443 7351;7352 16646;16647;16648;16649 15182;15183 15183 2667 2 TMKTQNEGER CDLAGSERTMKTQNEG KTQNEGERLRETGNIN R T M E R L 0 1 1 0 0 1 2 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 10 1 1192.5506 Q96Q89 Q96Q89 387 396 KIF20B Kinesin-like protein KIF20B yes yes 2 0.025433 46.462 By MS/MS 1 0 0 0 6586 2528 7353 16650 15184 15184 1 TMLLLSRSPEAQPK VTGASLRRTMLLLSRS RSPEAQPKTLPLTGST R T M P K T 1 1 0 0 0 1 1 0 0 0 3 1 1 0 2 2 1 0 0 0 0 0 14 1 1569.8549 P55265 P55265 818 831 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 2;3 2.8491E-06 120.32 By MS/MS By MS/MS 3 2 145510000 88451000 57055000 6587 1776 7354;7355 16651;16652;16653;16654;16655 15185;15186;15187;15188;15189 15188 225 3347;3348 5 TMSVSDFNYSR SINEIPERTMSVSDFN VSDFNYSRTSPSKRPN R T M S R T 0 1 1 1 0 0 0 0 0 0 0 0 1 1 0 3 1 0 1 1 0 0 11 0 1305.566 Q96RT1;H0YA04 Q96RT1 1156 1166 ERBB2IP Protein LAP2 yes no 2 2.5687E-06 128.81 By MS/MS By MS/MS 2 2 21171000 14383000 6788200 6588 2536 7356;7357 16656;16657;16658;16659 15190;15191;15192;15193 15192 339 5115;7858 4 TNEKVELQELNDR NTEFKNTRTNEKVELQ ELQELNDRFANYIDKV R T N D R F 0 1 2 1 0 1 3 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 13 1 1586.79 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;P17661 P08670 101 113 VIM;DES Vimentin;Desmin yes no 3 6.0134E-07 143.58 By MS/MS By MS/MS 1 1 10493000 5782000 4711200 6589 1546 7358 16660;16661 15194;15195 15195 2 TNKSPEAKPLPGK LGSVEAPKTNKSPEAK EAKPLPGKLPKGISAG K T N G K L 1 0 1 0 0 0 1 1 0 0 1 3 0 0 3 1 1 0 0 0 0 0 13 2 1365.7616 P46087;F5H5X6;F5H359;F5GWB7;F5H709 P46087 64 76 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 3 0.0087242 63.754 By matching By MS/MS 1 1 4917400 1803100 3114200 6590 1707 7359 16662;16663 15196 15196 3158 1 TNLENKDLSKK PHSPPQPKTNLENKDL ENKDLSKKSPAEMLLT K T N K K S 0 0 2 1 0 0 1 0 0 0 2 3 0 0 0 1 1 0 0 0 0 0 11 2 1288.6987 O15018 O15018 1856 1866 PDZD2 PDZ domain-containing protein 2;Processed PDZ domain-containing protein 2 yes yes 2 0.018738 61.48 By matching By MS/MS 1 1 65802000 35767000 30035000 6591 1352 7360 16664;16665 15197 15197 1 TNLQPLESTQSQDF LNHMYKLRTNLQPLES ESTQSQDF________ R T N D F - 0 0 1 1 0 3 1 0 0 0 2 0 0 1 1 2 2 0 0 0 0 0 14 0 1606.7475 Q9Y248 Q9Y248 172 185 GINS2 DNA replication complex GINS protein PSF2 yes yes 2 1.5354E-08 128.73 By MS/MS By MS/MS 1 1 21448000 12491000 8957200 6592 2884 7361 16666;16667 15198;15199 15198 6018 2 TNLSGRQSPSFK EEKEVLLKTNLSGRQS GRQSPSFKLSLSSGTK K T N F K L 0 1 1 0 0 1 0 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 12 1 1320.6786 Q6IN85 Q6IN85 734 745 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 2 0.0030008 89.541 By MS/MS By MS/MS 1 1 37533000 21286000 16247000 6593 2144 7362 16668;16669 15200;15201 15200 4260;4261;4262 2 TNMSLCFPRYPSEGHR YRTVVPWKTNMSLCFP RYPSEGHRAFHLIFEA K T N H R A 0 2 1 0 1 0 1 1 1 0 1 0 1 1 2 2 1 0 1 0 0 0 16 1 1950.8829 G3V4Q5;Q15722 G3V4Q5 63 78 LTB4R Leukotriene B4 receptor 1 yes no 3 0.0272 42.314 By MS/MS 1 0 0 0 6594 975 7363 16670 15202 15202 7423 1 TNNHIGGGAFSVDSPR SSTGSLLKTNNHIGGG AFSVDSPRIYSNSLPP K T N P R I 1 1 2 1 0 0 0 3 1 1 0 0 0 1 1 2 1 0 0 1 0 0 16 0 1627.7703 Q9Y2U8 Q9Y2U8 389 404 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 0.00017639 95.9 By MS/MS By MS/MS 1 1 5448200 3126900 2321300 6595 2896 7364 16671;16672 15203;15204 15203 6028 2 TNNNQILEVKSPIK EPPPPLLKTNNNQILE LEVKSPIKQSKSDKQI K T N I K Q 0 0 3 0 0 1 1 0 0 2 1 2 0 0 1 1 1 0 0 1 0 0 14 1 1596.8835 P42568;A0A0D9SF09;B1APT5 P42568 473 486 MLLT3 Protein AF-9 yes no 2;3 0.00038457 98.572 By MS/MS By MS/MS 2 2 19447000 12444000 7003200 6596 1697 7365 16673;16674;16675;16676 15205;15206 15205 3114 2 TNPPTQKPPSPPMSGR ARTGTLSRTNPPTQKP PSPPMSGRGTLGRNTP R T N G R G 0 1 1 0 0 1 0 1 0 0 0 1 1 0 6 2 2 0 0 0 0 0 16 1 1690.8461 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 174 189 ABI1 Abl interactor 1 yes no 3 0.0014504 69.431 By MS/MS By MS/MS 1 1 40906000 25230000 15676000 6597 201 7366 16677;16678 15207;15208;15209 15209 6277 3 TNQAILSQLYQSPNR FANNPSQKTNQAILSQ QLYQSPNRR_______ K T N N R R 1 1 2 0 0 3 0 0 0 1 2 0 0 0 1 2 1 0 1 0 0 0 15 0 1731.8904 C9JB16;A0A0A0MRX1;Q12926 C9JB16 75 89 ELAVL2 ELAV-like protein;ELAV-like protein 2 yes no 2 0.0015316 79.317 By MS/MS By matching 1 1 10177000 5820000 4357400 6598 203 7367 16679;16680 15210 15210 369 1 TNSMGSATGPLPGTK SKGSKRVRTNSMGSAT TGPLPGTKVEPTVLDR R T N T K V 1 0 1 0 0 0 0 3 0 0 1 1 1 0 2 2 3 0 0 0 0 0 15 0 1417.6871 O15014 O15014 465 479 ZNF609 Zinc finger protein 609 yes yes 2 0.00034817 98.552 By MS/MS By MS/MS 1 1 14592000 8147600 6444300 6599 1351 7368 16681;16682 15211;15212 15211 2468 2 TNSMGSATGPLPGTKVEPTVLDR SKGSKRVRTNSMGSAT VEPTVLDRNCPSPVLI R T N D R N 1 1 1 1 0 0 1 3 0 0 2 1 1 0 3 2 4 0 0 2 0 0 23 1 2327.1791 O15014 O15014 465 487 ZNF609 Zinc finger protein 609 yes yes 3 0.00012785 71.882 By MS/MS By matching 1 1 15441000 8849200 6591800 6600 1351 7369 16683;16684 15213 15213 2468 1 TNSMQQLEQWIK EADRVIQRTNSMQQLE QQLEQWIKIQKGRGHE R T N I K I 0 0 1 0 0 3 1 0 0 1 1 1 1 0 0 1 1 1 0 0 0 0 12 0 1504.7344 B4DJX4;Q9HAU0;A0JP02 B4DJX4 300 311 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes no 2 1.6102E-95 219.84 By MS/MS By MS/MS 1 2 33814000 17429000 16386000 6601 483 7370 16685;16686;16687 15214;15215 15214 916 2 TNSMSSSGLGSPNR QGIGIPSRTNSMSSSG SGLGSPNRSSPSIICM R T N N R S 0 1 2 0 0 0 0 2 0 0 1 0 1 0 1 5 1 0 0 0 0 0 14 0 1393.6256 F8VQD8;A0A087X050;F8VVY1;F8VUB4;F8VX63;F8VP97;F8VV52;Q9NZN8 F8VQD8 70 83 CNOT2 CCR4-NOT transcription complex subunit 2 yes no 2 0.00081067 96.773 By MS/MS By MS/MS 1 2 60040000 31676000 28365000 6602 123 7371;7372 16688;16689;16690 15216;15217;15218;15219 15217 14 216 4 TNSPGFQK FDKPNFNRTNSPGFQK TNSPGFQKKVQFGNEN R T N Q K K 0 0 1 0 0 1 0 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 8 0 877.42938 A0A087X0H9;Q5T8P6 A0A087X0H9 521 528 RBM26 RNA-binding protein 26 yes no 2 9.2139E-09 172.98 By MS/MS By MS/MS 1 1 20138000 11481000 8656800 6603 126 7373 16691;16692 15220;15221;15222;15223 15223 225 4 TNSSDSERSPDLGHSTQIPR LSKPLSERTNSSDSER GHSTQIPRKVVYDQLN R T N P R K 0 2 1 2 0 1 1 1 1 1 1 0 0 0 2 5 2 0 0 0 0 0 20 1 2183.0203 Q6VY07;B4DF77 Q6VY07 526 545 PACS1 Phosphofurin acidic cluster sorting protein 1 yes no 3 0.0032962 61.522 By MS/MS By MS/MS 1 1 18608000 10071000 8537500 6604 2173 7374 16693;16694 15224;15225 15225 4344;4345 2 TNSSSSSPVVLK EKPRKRRRTNSSSSSP SSSPVVLKEVPKAVVP R T N L K E 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 5 1 0 0 2 0 0 12 0 1204.6299 E9PMC9;Q7Z589 E9PMC9 208 219 C11orf30;EMSY Protein EMSY yes no 2 0.017708 62.166 By MS/MS By MS/MS 1 1 14782000 7833000 6949300 6605 827 7375 16695;16696 15226;15227 15227 1476 2 TNTMNGSKSPVISR PTRKPWERTNTMNGSK SKSPVISRPKSTPLSQ R T N S R P 0 1 2 0 0 0 0 1 0 1 0 1 1 0 1 3 2 0 0 1 0 0 14 1 1490.7511 A0A0U1RRM6;Q8N8S7 A0A0U1RRM6 732 745 ENAH Protein enabled homolog yes no 2;3 0.002449 107.73 By MS/MS By MS/MS 3 3 25612000 13697000 11915000 6606 354 7376;7377 16697;16698;16699;16700;16701;16702 15228;15229;15230;15231 15228 661;662 4 TNTMNGSKSPVISRPK PTRKPWERTNTMNGSK SPVISRPKSTPLSQPS R T N P K S 0 1 2 0 0 0 0 1 0 1 0 2 1 0 2 3 2 0 0 1 0 0 16 2 1715.8989 A0A0U1RRM6 A0A0U1RRM6 732 747 yes yes 2;3 0.00012541 95.822 By MS/MS By MS/MS 5 7 255980000 122830000 133150000 6607 354 7378;7379;7380;7381;7382 16703;16704;16705;16706;16707;16708;16709;16710;16711;16712;16713;16714 15232;15233;15234;15235;15236;15237;15238;15239;15240 15237 38 661;662 8 TNTPQGVLPSSQLK SLGLDDSRTNTPQGVL VLPSSQLKSQGSSNVA R T N L K S 0 0 1 0 0 2 0 1 0 0 2 1 0 0 2 2 2 0 0 1 0 0 14 0 1468.7886 Q14004 Q14004 1056 1069 CDK13 Cyclin-dependent kinase 13 yes yes 2 0.0036002 101.42 By matching By MS/MS 1 1 16845000 8281900 8563100 6608 1936 7383 16715;16716 15241 15241 6810 1 TNTPVKEDWNVR TTEVTQPRTNTPVKED VKEDWNVRITKLRKQV R T N V R I 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 0 2 1 0 2 0 0 12 1 1457.7263 P78347 P78347 556 567 GTF2I General transcription factor II-I yes yes 3 0.0020094 81.676 By MS/MS By MS/MS 1 1 17316000 9175600 8140800 6609 1815 7384 16717;16718 15242;15243 15243 6753 2 TPAAAAAMNLASPR AVNLADSRTPAAAAAM AMNLASPRTAVAPSAV R T P P R T 6 1 1 0 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 0 0 14 0 1340.6871 Q9UQ35 Q9UQ35 2261 2274 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 3.4328E-27 170.09 By MS/MS By MS/MS 4 4 226530000 123650000 102880000 6610 2877 7385;7386 16719;16720;16721;16722;16723;16724;16725;16726 15244;15245;15246;15247;15248;15249;15250;15251;15252;15253;15254;15255;15256;15257;15258;15259 15252 379 6003;7117 16 TPAAPASPAAVPSEGSGGSTTGWR RARNAAPRTPAAPASP GGSTTGWRAREEQPPS R T P W R A 5 1 0 0 0 0 1 4 0 0 0 0 0 0 4 4 3 1 0 1 0 0 24 0 2211.0556 P07199 P07199 150 173 CENPB Major centromere autoantigen B yes yes 2;3 1.1499E-09 91.889 By MS/MS By MS/MS 2 2 116040000 66006000 50034000 6611 1536 7387 16727;16728;16729;16730 15260;15261;15262;15263 15261 2825 4 TPADTGFAFPDWAYKPESSPGSR ________________ PESSPGSRQIQLWHFI K T P S R Q 3 1 0 2 0 0 1 2 0 0 0 1 0 2 4 3 2 1 1 0 0 0 23 1 2483.1394 P50548 P50548 3 25 ERF ETS domain-containing transcription factor ERF yes yes 3 8.4784E-06 76.799 By matching By MS/MS 1 1 7363300 813510 6549800 6612 1739 7388 16731;16732 15264 15264 3293 1 TPAIPTAVNLADSRTPAAAAAMNLASPR AMNLASARTPAIPTAV AMNLASPRTAVAPSAV R T P P R T 9 2 2 1 0 0 0 0 0 1 2 0 1 0 4 2 3 0 0 1 0 0 28 1 2747.4388 Q9UQ35 Q9UQ35 2247 2274 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3;4 7.3462E-06 71.408 By MS/MS By MS/MS 2 2 33191000 18647000 14543000 6613 2877 7389 16733;16734;16735;16736 15265;15266;15267;15268;15269 15269 6003;7117 5 TPALAALAALGAPGPAPTAASSP EAAGAGARTPALAALA APTAASSP________ R T P S P - 9 0 0 0 0 0 0 2 0 0 3 0 0 0 5 2 2 0 0 0 0 0 23 0 1972.0629 Q86V15 Q86V15 1737 1759 CASZ1 Zinc finger protein castor homolog 1 yes yes 2;3 0.00041283 69.314 By MS/MS By matching 2 2 10365000 6703800 3661700 6614 2239 7390 16737;16738;16739;16740 15270;15271 15270 4483 2 TPASTPVSGTPQASPMIER MNMIEEIKTPASTPVS QASPMIERSNVVRKDY K T P E R S 2 1 0 0 0 1 1 1 0 1 0 0 1 0 4 3 3 0 0 1 0 0 19 0 1925.9517 Q9UHR4 Q9UHR4 248 266 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 1.2157E-19 130.95 By MS/MS By MS/MS 2 2 26290000 15473000 10816000 6615 2816 7391;7392 16741;16742;16743;16744 15272;15273;15274;15275 15272 5786;5787 4 TPDTSTYCYETAEK ETSTKTTRTPDTSTYC YCYETAEKITRTPQAS R T P E K I 1 0 0 1 1 0 2 0 0 0 0 1 0 0 1 1 4 0 2 0 0 0 14 0 1664.6876 P46821 P46821 2034 2047 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.00037605 104.79 By MS/MS By MS/MS 2 2 40932000 22755000 18177000 6616 1712 7393;7394 16745;16746;16747;16748 15276;15277;15278 15278 6706;7615;7616 3 TPDTSTYCYETAEKITR ETSTKTTRTPDTSTYC ETAEKITRTPQASTYS R T P T R T 1 1 0 1 1 0 2 0 0 1 0 1 0 0 1 1 5 0 2 0 0 0 17 1 2034.9204 P46821 P46821 2034 2050 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 1.2543E-25 151.49 By MS/MS By MS/MS 3 3 38072000 21109000 16963000 6617 1712 7395;7396 16749;16750;16751;16752;16753;16754 15279;15280;15281;15282;15283 15279 6706;7615;7616 5 TPEDGDYSYEIIEK ETIGKTTKTPEDGDYS YSYEIIEKTTRTPEEG K T P E K T 0 0 0 2 0 0 3 1 0 2 0 1 0 0 1 1 1 0 2 0 0 0 14 0 1657.7359 P46821 P46821 1932 1945 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.3174E-08 128.81 By MS/MS By MS/MS 2 2 92118000 48336000 43781000 6618 1712 7397;7398 16755;16756;16757;16758 15284;15285;15286 15286 3185;7617;7618 3 TPEDGDYSYEIIEKTTR ETIGKTTKTPEDGDYS EIIEKTTRTPEEGGYS K T P T R T 0 1 0 2 0 0 3 1 0 2 0 1 0 0 1 1 3 0 2 0 0 0 17 1 2015.9324 P46821 P46821 1932 1948 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0043165 56.956 By MS/MS By matching 1 1 7294800 4469000 2825800 6619 1712 7399 16759;16760 15287 15287 3185;7617;7618 1 TPEEGGYSYDISEK EIIEKTTRTPEEGGYS YSYDISEKTTSPPEVS R T P E K T 0 0 0 1 0 0 3 2 0 1 0 1 0 0 1 2 1 0 2 0 0 0 14 0 1573.6784 P46821 P46821 1949 1962 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.4986E-108 225.55 By MS/MS By MS/MS 3 3 62600000 41239000 21361000 6620 1712 7400;7401 16761;16762;16763;16764;16765;16766 15288;15289;15290;15291;15292;15293 15290 3186;6707;7619;7620 4 TPEELDDSDFETEDFDVR RKAVLMIRTPEELDDS ETEDFDVRSRTSVQTE R T P V R S 0 1 0 5 0 0 4 0 0 0 1 0 0 2 1 1 2 0 0 1 0 0 18 0 2157.8862 G3XAM7;P35221 G3XAM7 634 651 CTNNA1 Catenin alpha-1 yes no 2;3 3.0783E-40 164.53 By MS/MS By MS/MS 2 2 802140000 442970000 359170000 6621 986 7402 16767;16768;16769;16770 15294;15295;15296;15297;15298;15299 15294 1798 6 TPEELDDSDFETEDFDVRSR RKAVLMIRTPEELDDS EDFDVRSRTSVQTEDD R T P S R T 0 2 0 5 0 0 4 0 0 0 1 0 0 2 1 2 2 0 0 1 0 0 20 1 2401.0194 G3XAM7;P35221 G3XAM7 634 653 CTNNA1 Catenin alpha-1 yes no 3 0.003237 57.788 By MS/MS By matching 1 1 11232000 7394300 3838100 6622 986 7403 16771;16772 15300 15300 1795;1798 1 TPENLITEIR LTRNQIPRTPENLITE ENLITEIRSSWRKAIE R T P I R S 0 1 1 0 0 0 2 0 0 2 1 0 0 0 1 0 2 0 0 0 0 0 10 0 1184.6401 Q5VY60;Q7Z4H7;Q5SYF9 Q5VY60 448 457 HAUS6 HAUS augmin-like complex subunit 6 yes no 2 0.011169 87.667 By matching By MS/MS 1 1 2525500 1383700 1141900 6623 2122 7404 16773;16774 15301 15301 6893 1 TPEPVVPTAPEPHPTTSTDQPVTPK RTNRSSVKTPEPVVPT TDQPVTPKLTSRATRR K T P P K L 1 0 0 1 0 1 2 0 1 0 0 1 0 0 8 1 6 0 0 3 0 0 25 0 2622.3177 Q14676 Q14676 1608 1632 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 1.0912E-19 113.36 By MS/MS By MS/MS 1 1 21335000 11054000 10281000 6624 1951 7405 16775;16776 15302;15303;15304 15304 6821 3 TPESQPDTPPGTPLVSQDEKR TLRWEETRTPESQPDT LVSQDEKRDAELPKKR R T P K R D 0 1 0 2 0 2 2 1 0 0 1 1 0 0 5 2 3 0 0 1 0 0 21 1 2278.1077 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60 A0A0D9SEV0 111 131 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase yes no 3 8.7609E-09 93.34 By MS/MS By MS/MS 1 2 23303000 7628900 15674000 6625 309 7406;7407 16777;16778;16779 15305;15306;15307 15306 6301;6302 3 TPETVVPTAPELQISTSTDQPVTPKPTSR RTNMSSVKTPETVVPT VTPKPTSRTTRSRTNM K T P S R T 1 1 0 1 0 2 2 0 0 1 1 1 0 0 6 3 7 0 0 3 0 0 29 1 3076.5928 Q14676 Q14676 1321 1349 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.00032443 60.472 By MS/MS 1 7638300 0 7638300 6626 1951 7408 16780 15308 15308 6822 1 TPGHPPPPEIPSELGACDFEKPESPR TSAAGDTRTPGHPPPP FEKPESPRAASSSSPG R T P P R A 1 1 0 1 1 0 4 2 1 1 1 1 0 1 8 2 1 0 0 0 0 0 26 1 2840.3439 Q92538 Q92538 1750 1775 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 3 0.020515 40.668 By MS/MS By matching 1 1 15794000 7929600 7864000 6627 2421 7409 16781;16782 15309 15309 4869 1 TPGVLLPGAGGAAGFGMTSPPPPTSPSR PRPLGFERTPGVLLPG PPPTSPSRTAVPPGLS R T P S R T 3 1 0 0 0 0 0 6 0 0 2 0 1 1 7 3 3 0 0 1 0 0 28 0 2576.3057 Q96L91;A0A0A0MR72;A0A0A0MR80;F2Z2G7;H9KV84;Q6ZTU2 Q96L91 297 324 EP400;EP400NL E1A-binding protein p400;EP400 N-terminal-like protein yes no 3 1.6536E-17 97.152 By MS/MS By matching 1 1 24207000 14106000 10101000 6628 2514 7410 16783;16784 15310 15310 5077;7008 1 TPISPLKTGVSKPIVK QNPELLPKTPISPLKT GVSKPIVKSTLSQTVP K T P V K S 0 0 0 0 0 0 0 1 0 2 1 3 0 0 3 2 2 0 0 2 0 0 16 2 1664.0236 Q9NQW6 Q9NQW6 320 335 ANLN Actin-binding protein anillin yes yes 3 0.00092146 76.311 By MS/MS By MS/MS 1 1 17842000 9362400 8479700 6629 2713 7411 16785;16786 15311;15312 15311 5538 2 TPLALAGSPTPK PSSPLLKKTPLALAGS LAGSPTPKNPEDKSPQ K T P P K N 2 0 0 0 0 0 0 1 0 0 2 1 0 0 3 1 2 0 0 0 0 0 12 0 1151.655 B9EGQ5;M0QXA7;O95785 B9EGQ5 170 181 WIZ Protein Wiz yes no 2 4.9601E-09 142.39 By MS/MS By MS/MS 1 1 26713000 15304000 11409000 6630 538 7412 16787;16788 15313;15314 15313 982 2 TPLGASLDEQSSSTLK AIWLKDCRTPLGASLD EQSSSTLKGVLVRNGG R T P L K G 1 0 0 1 0 1 1 1 0 0 3 1 0 0 1 4 2 0 0 0 0 0 16 0 1632.8206 E9PHV5;P28290 E9PHV5 87 102 SSFA2 Sperm-specific antigen 2 yes no 2 0.00019123 92.633 By MS/MS By MS/MS 1 1 9819000 5329300 4489800 6631 798 7413 16789;16790 15315;15316 15315 1433 2 TPLSPSPMKTPPAAAVSPMQR PAAAAIPRTPLSPSPM AAVSPMQRHSISGPIS R T P Q R H 3 1 0 0 0 1 0 0 0 0 1 1 2 0 6 3 2 0 0 1 0 0 21 1 2163.118 Q69YQ0 Q69YQ0 865 885 SPECC1L Cytospin-A yes yes 3 0.0064787 49.973 By MS/MS By matching 1 1 6375600 3730400 2645200 6632 2137 7414 16791;16792 15317 15317 4252 1 TPLSQSMSVLPTSKPEK LSKSNLQKTPLSQSMS LPTSKPEKVLLRPGDF K T P E K V 0 0 0 0 0 1 1 0 0 0 2 2 1 0 3 4 2 0 0 1 0 0 17 1 1828.9604 Q6WKZ4;E7EX40 Q6WKZ4 229 245 RAB11FIP1 Rab11 family-interacting protein 1 no no 2;3 4.3356E-05 91.932 By MS/MS By MS/MS 2 2 16673000 9246700 7426700 6633 2175;752 7415 16793;16794;16795;16796 15318;15319;15320;15321;15322 15318 1376;1377 5 TPLSQVNKVWDQSSV RLPAGAVRTPLSQVNK KVWDQSSV________ R T P S V - 0 0 1 1 0 2 0 0 0 0 1 1 0 0 1 3 1 1 0 3 0 0 15 1 1686.8577 H7BYJ3;O14578 H7BYJ3 1626 1640 CIT Citron Rho-interacting kinase yes no 2 0.0035869 68.972 By MS/MS By matching 1 1 4753200 2801600 1951600 6634 1153 7416 16797;16798 15323 15323 2097 1 TPLYLQPDAYGSLDR KGRPSSPRTPLYLQPD DAYGSLDRATSPRPRA R T P D R A 1 1 0 2 0 1 0 1 0 0 3 0 0 0 2 1 1 0 2 0 0 0 15 0 1707.8468 Q8WUF5 Q8WUF5 123 137 PPP1R13L RelA-associated inhibitor yes yes 2 0.012264 54.7 By MS/MS By matching 1 1 3688700 2005900 1682800 6635 2400 7417 16799;16800 15324 15324 7817 1 TPMYGSQTPLQDGSR PMYGSGSRTPMYGSQT TPLQDGSRTPHYGSQT R T P S R T 0 1 0 1 0 2 0 2 0 0 1 0 1 0 2 2 2 0 1 0 0 0 15 0 1636.7515 O00267 O00267 784 798 SUPT5H Transcription elongation factor SPT5 yes yes 2 0.0083102 77.24 By MS/MS By MS/MS 1 1 6616100 3446200 3169900 6636 1328 7418 16801;16802 15325;15326 15326 6588 2 TPPSTTVGSHSPPETPVLTR PKQDVVGKTPPSTTVG PETPVLTRSSAQTSAA K T P T R S 0 1 0 0 0 0 1 1 1 0 1 0 0 0 5 3 5 0 0 2 0 0 20 0 2060.0538 H7C4X9;A0A087WVZ6;Q9ULU4 H7C4X9 673 692 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.00096292 67.43 By MS/MS By MS/MS 1 1 20807000 11117000 9689900 6637 69 7419 16803;16804 15327;15328;15329 15327 123;124;6231;6232 3 TPQAPASANLVGPR ANYPSSSRTPQAPASA SANLVGPRSAHATAPV R T P P R S 3 1 1 0 0 1 0 1 0 0 1 0 0 0 3 1 1 0 0 1 0 0 14 0 1377.7365 Q9UQ35 Q9UQ35 2329 2342 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0074326 65.241 By MS/MS By matching 1 1 7211200 3944100 3267100 6638 2877 7420 16805;16806 15330 15330 6004 1 TPQEAIMDGTEIAVSPR LSLYELHRTPQEAIMD TEIAVSPRSLHSELMC R T P P R S 2 1 0 1 0 1 2 1 0 2 0 0 1 0 2 1 2 0 0 1 0 0 17 0 1813.888 Q06587 Q06587 24 40 RING1 E3 ubiquitin-protein ligase RING1 yes yes 2;3 1.522E-05 105.01 By MS/MS By MS/MS 2 2 7841700 6248800 1592900 6639 1858 7421 16807;16808;16809;16810 15331;15332;15333 15332 3498 3 TPQEAITDGLEIVVSPR LSLYELQRTPQEAITD LEIVVSPRSLHSELMC R T P P R S 1 1 0 1 0 1 2 1 0 2 1 0 0 0 2 1 2 0 0 2 0 0 17 0 1823.9629 X6RFN3;Q99496 X6RFN3 27 43 RNF2 E3 ubiquitin-protein ligase RING2 yes no 3 1.3132E-05 96.016 By MS/MS 1 2785500 2785500 0 6640 2549 7422 16811 15334 15334 5157 1 TPQGPPEIYSDTQFPSLQSTAK ARLTTTRKTPQGPPEI PSLQSTAKHVESRKDK K T P A K H 1 0 0 1 0 3 1 1 0 1 1 1 0 1 4 3 3 0 1 0 0 0 22 0 2391.1594 Q9UKY7;H0Y8K3;D6R9V8;D6RFH2;D6RDN0 Q9UKY7 182 203 CDV3 Protein CDV3 homolog yes no 3 0.0002844 67.76 By matching By MS/MS 1 1 68301000 43840000 24462000 6641 2839 7423 16812;16813 15335 15335 7939 1 TPQNVPASPGGDR QSVKQAPKTPQNVPAS PASPGGDRSARHRYPQ K T P D R S 1 1 1 1 0 1 0 2 0 0 0 0 0 0 3 1 1 0 0 1 0 0 13 0 1294.6266 H0YLX2;Q2KHR2 H0YLX2 314 326 RFX7 DNA-binding protein RFX7 yes no 2 0.0053631 71.98 By matching By MS/MS 1 1 9506400 4965700 4540600 6642 1094 7424 16814;16815 15336 15336 2015 1 TPQPCSRPASPEPELLPEADSK RYGATDLRTPQPCSRP LLPEADSKKLPSPARA R T P S K K 2 1 0 1 1 1 3 0 0 0 2 1 0 0 6 3 1 0 0 0 0 0 22 1 2405.1533 Q12756 Q12756 1523 1544 KIF1A Kinesin-like protein KIF1A yes yes 3 0.0096979 47.808 By matching By MS/MS 1 2 18406000 5767800 12638000 6643 1875 7425;7426 16816;16817;16818 15337;15338 15337 3551 1 TPQPPAEEPPHPLTYSQLPR PLRPGFSRTPQPPAEE LTYSQLPRVGLSPDSP R T P P R V 1 1 0 0 0 2 2 0 1 0 2 0 0 0 7 1 2 0 1 0 0 0 20 0 2254.1382 Q8WXE0 Q8WXE0 370 389 CASKIN2 Caskin-2 yes yes 3 0.00038309 71.637 By MS/MS By MS/MS 1 1 9600700 3520800 6079900 6644 2412 7427 16819;16820 15339;15340 15340 4841;7820 2 TPQPSSPMDQMGK GGGQPLARTPQPSSPM SPMDQMGKMRPQPYGG R T P G K M 0 0 0 1 0 2 0 1 0 0 0 1 2 0 3 2 1 0 0 0 0 0 13 0 1402.6221 O14497 O14497 377 389 ARID1A AT-rich interactive domain-containing protein 1A yes yes 2 8.0696E-09 129.17 By MS/MS By MS/MS 2 2 66601000 36747000 29853000 6645 1339 7428;7429 16821;16822;16823;16824 15341;15342;15343;15344 15344 154 2422;2423 4 TPQSPAPCVLLR PETAPAARTPQSPAPC PAPCVLLRAQRSLAPE R T P L R A 1 1 0 0 1 1 0 0 0 0 2 0 0 0 3 1 1 0 0 1 0 0 12 0 1337.7126 Q9Y613 Q9Y613 495 506 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 7.866E-05 116.9 By MS/MS By MS/MS 1 1 63042000 31821000 31222000 6646 2943 7430 16825;16826 15345;15346 15345 6112 2 TPQSPTLPPAK VPSEDFERTPQSPTLP SPTLPPAKVAAPNLSR R T P A K V 1 0 0 0 0 1 0 0 0 0 1 1 0 0 4 1 2 0 0 0 0 0 11 0 1135.6237 P78310 P78310 329 339 CXADR Coxsackievirus and adenovirus receptor yes yes 2 0.0009522 103.14 By MS/MS By MS/MS 3 3 27747000 15647000 12100000 6647 1812 7431 16827;16828;16829;16830;16831;16832 15347;15348;15349;15350;15351;15352;15353;15354;15355;15356;15357 15348 3382 11 TPRTPRTPQLK SPNYRNTRTPRTPRTP TPRTPQLKDSSQTSRF R T P L K D 0 2 0 0 0 1 0 0 0 0 1 1 0 0 3 0 3 0 0 0 0 0 11 2 1293.7517 Q6PKG0;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 782 792 LARP1 La-related protein 1 yes no 2;3 0.0034223 75.566 By matching By MS/MS 2 2 72444000 37091000 35353000 6648 2162 7432 16833;16834;16835;16836 15358;15359 15359 6915;6916 2 TPSDDEEDNLFAPPK LKEKKERRTPSDDEED DNLFAPPKLTDEDFSP R T P P K L 1 0 1 3 0 0 2 0 0 0 1 1 0 1 3 1 1 0 0 0 0 0 15 0 1673.7421 A0A0A0MR88;A0A096LPC5;J3KP36;Q9Y4E1;F8W7U3;E7ESD2;Q641Q2 F8W7U3 243 257 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A no no 2 0.00044264 89.507 By matching By MS/MS 1 1 6116700 3391300 2725400 6649 729;158 7433 16837;16838 15360 15360 283 1 TPSEAERWLEEVSQVAK AFQPGHKRTPSEAERW EEVSQVAKAQQQQQQQ R T P A K A 2 1 0 0 0 1 4 0 0 0 1 1 0 0 1 2 1 1 0 2 0 0 17 1 1957.9745 A0A0C4DGH3;Q9Y6R0 A0A0C4DGH3 368 384 NUMBL Numb-like protein yes no 3 0.017467 47.64 By MS/MS 1 1326700 1326700 0 6650 293 7434 16839 15361 15361 524 1 TPSFLKK SKKKKKFRTPSFLKKS RTPSFLKKSKKKSDS_ R T P K K S 0 0 0 0 0 0 0 0 0 0 1 2 0 1 1 1 1 0 0 0 0 0 7 1 819.48544 P35611;P35612;Q9UEY8 P35611 724 730 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin no no 2 0.0072464 120.31 By MS/MS 1 69579000 0 69579000 6651 1673;2808;1674 7435 16840 15362 15362 3082 1 TPSIQPSLLPHAAPFAK PRHAPVVRTPSIQPSL PHAAPFAKSHLVHGSS R T P A K S 3 0 0 0 0 1 0 0 1 1 2 1 0 1 4 2 1 0 0 0 0 0 17 0 1773.9778 A0A0A0MSW3;P35658;H0YF36 A0A0A0MSW3 450 466 NUP214 Nuclear pore complex protein Nup214 yes no 3 2.2083E-05 85.087 By MS/MS By MS/MS 1 1 12467000 6162700 6303800 6652 226 7436 16841;16842 15363;15364;15365;15366 15366 416 4 TPSKPPAQLSPSVPK DLNQEEKKTPSKPPAQ QLSPSVPKRPKLPAPT K T P P K R 1 0 0 0 0 1 0 0 0 0 1 2 0 0 5 3 1 0 0 1 0 0 15 1 1532.8562 F5H8D7;P18887;M0QYS5 F5H8D7 226 240 XRCC1 DNA repair protein XRCC1 yes no 3 0.01287 52.318 By MS/MS By matching 1 1 15144000 7046200 8098000 6653 898 7437 16843;16844 15367 15367 1613 1 TPSNGAEGLTPR TVLSTPFRTPSNGAEG GAEGLTPRSGTTPKPV R T P P R S 1 1 1 0 0 0 1 2 0 0 1 0 0 0 2 1 2 0 0 0 0 0 12 0 1198.5942 Q99459 Q99459 415 426 CDC5L Cell division cycle 5-like protein yes yes 2 0.016235 80.371 By MS/MS By MS/MS 1 2 9389200 3702000 5687200 6654 2548 7438 16845;16846;16847 15368;15369 15368 1 TPSPEPVDKDFYSEFGNK VVLSSLERTPSPEPVD FYSEFGNKTTGKMENY R T P N K T 0 0 1 2 0 0 2 1 0 0 0 2 0 2 3 2 1 0 1 1 0 0 18 1 2055.9426 Q9Y2I1 Q9Y2I1 1282 1299 NISCH Nischarin yes yes 3 0.012495 48.883 By matching By MS/MS 1 1 7089000 3443200 3645800 6655 2890 7439 16848;16849 15370 15370 6023 1 TPSPKEEDEEPESPPEKK ASKASKEKTPSPKEED PESPPEKKTSTSPPPE K T P K K T 0 0 0 1 0 0 6 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 18 2 2051.9535 Q9H1E3 Q9H1E3 202 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 2.1362E-19 131.86 By MS/MS By MS/MS 1 1 339880000 178390000 161500000 6656 2637 7440 16850;16851 15371;15372;15373;15374;15375;15376 15376 5373 6 TPSPPPPIPEDIALGKK QSKKKGPRTPSPPPPI EDIALGKKYKEKYKVK R T P K K Y 1 0 0 1 0 0 1 1 0 2 1 2 0 0 6 1 1 0 0 0 0 0 17 1 1755.9771 Q5T200 Q5T200 263 279 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 0.027829 45.33 By MS/MS 1 0 0 0 6657 2094 7441 16852 15377 15377 1 TPSPSPSTALQQFR GGLGDFSRTPSPSPST STALQQFRRKSDSPTS R T P F R R 1 1 0 0 0 2 0 0 0 0 1 0 0 1 3 3 2 0 0 0 0 0 14 0 1515.7682 Q9UQ84;H0YAZ2 Q9UQ84 621 634 EXO1 Exonuclease 1 yes no 2 0.026441 54.471 By MS/MS By matching 1 1 4555100 2599500 1955500 6658 2879 7442 16853;16854 15378 15378 1 TPSPTLK LASMNVERTPSPTLKS RTPSPTLKSNTMLSLL R T P L K S 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 1 2 0 0 0 0 0 7 0 742.4225 E9PCK9 E9PCK9 474 480 MLIP yes yes 2 0.011331 98.582 By MS/MS By MS/MS 1 1 79101000 36908000 42193000 6659 764 7443 16855;16856 15379;15380 15380 1387 2 TPSQDSDYINANFIK SRVKLTLKTPSQDSDY YINANFIKGVYGPKAY K T P I K G 1 0 2 2 0 1 0 0 0 2 0 1 0 1 1 2 1 0 1 0 0 0 15 0 1711.8053 Q05209;H0YC15 Q05209 81 95 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes no 2 0.009726 60.631 By matching By MS/MS 1 1 3377500 1497500 1880000 6660 1852 7444 16857;16858 15381 15381 3482 1 TPSRQSHSSSSPHPK PPPKQKSKTPSRQSHS SSSSPHPKVKSGTPPR K T P P K V 0 1 0 0 0 1 0 0 2 0 0 1 0 0 3 6 1 0 0 0 0 0 15 1 1618.7812 Q9UQ35;I3L182;I3L4D8 Q9UQ35 829 843 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.025073 52.693 By MS/MS By matching 1 1 4398200 2146500 2251800 6661 2877 7445 16859;16860 15382 15382 0 TPSSEEISPTKFPGLYR EHGSGLTRTPSSEEIS TKFPGLYRTGEPSPPH R T P Y R T 0 1 0 0 0 0 2 1 0 1 1 1 0 1 3 3 2 0 1 0 0 0 17 1 1907.9629 Q15311;J3QLT3;E7ENF8 Q15311 27 43 RALBP1 RalA-binding protein 1 yes no 2;3 0.00040487 80.632 By MS/MS By MS/MS 2 2 66237000 38204000 28033000 6662 1982 7446 16861;16862;16863;16864 15383;15384;15385 15384 3866;3867 3 TPSSFRQPFTPTSR PRNQVIPRTPSSFRQP QPFTPTSRSLLRQPDI R T P S R S 0 2 0 0 0 1 0 0 0 0 0 0 0 2 3 3 3 0 0 0 0 0 14 1 1607.8056 G3V1T4;P57740 G3V1T4 55 68 NUP107 Nuclear pore complex protein Nup107 yes no 2;3 0.0023581 70.628 By MS/MS By matching 2 2 37288000 21687000 15602000 6663 961 7447 16865;16866;16867;16868 15386;15387 15386 1748;6487 2 TPSSPCPASK ELQPPRSKTPSSPCPA SSPCPASKVVRPLRTF K T P S K V 1 0 0 0 1 0 0 0 0 0 0 1 0 0 3 3 1 0 0 0 0 0 10 0 1030.4753 Q9NQS7 Q9NQS7 478 487 INCENP Inner centromere protein yes yes 2 0.0046491 79.036 By MS/MS By MS/MS 2 2 23431000 16134000 7296500 6664 2712 7448 16869;16870;16871;16872 15388;15389;15390 15389 5533 3 TPSSPLQSCTPSLSPR PRSPHASRTPSSPLQS CTPSLSPRSHVPSPHQ R T P P R S 0 1 0 0 1 1 0 0 0 0 2 0 0 0 4 5 2 0 0 0 0 0 16 0 1713.8356 R4GNJ5;A0A0C4DGT6;Q96AP0 R4GNJ5 333 348 ACD Adrenocortical dysplasia protein homolog yes no 2 0.0018058 72.615 By MS/MS By MS/MS 2 2 30729000 17338000 13391000 6665 300 7449;7450 16873;16874;16875;16876 15391;15392;15393 15392 538;539;540 3 TPSSQNLLALLAR VPSFDFPKTPSSQNLL NLLALLARQGVVMTPP K T P A R Q 2 1 1 0 0 1 0 0 0 0 4 0 0 0 1 2 1 0 0 0 0 0 13 0 1382.7882 O75385 O75385 636 648 ULK1 Serine/threonine-protein kinase ULK1 yes yes 2 0.0029647 89.029 By MS/MS By MS/MS 1 1 8136700 4858500 3278200 6666 1437 7451 16877;16878 15394;15395 15394 2648 1 TPSSSPPITPPASETK SIRNWVTRTPSSSPPI TPPASETKIMSPRKAL R T P T K I 1 0 0 0 0 0 1 0 0 1 0 1 0 0 5 4 3 0 0 0 0 0 16 0 1595.8043 F5GZ90;Q9NZJ0 F5GZ90 466 481 DTL Denticleless protein homolog yes no 2 9.7328E-11 129.05 By MS/MS By MS/MS 2 2 49052000 27296000 21755000 6667 867 7452;7453 16879;16880;16881;16882 15396;15397;15398;15399;15400;15401;15402 15401 1560;1561;1562;6463 7 TPSTPVACSTPAQLK PEQNEKLKTPSTPVAC CSTPAQLKRKIRKKSN K T P L K R 2 0 0 0 1 1 0 0 0 0 1 1 0 0 3 2 3 0 0 1 0 0 15 0 1556.7868 Q6PL18;A0A0B4J211 Q6PL18 1149 1163 ATAD2 ATPase family AAA domain-containing protein 2 yes no 2 0.0024517 71.879 By MS/MS By MS/MS 1 1 13941000 7813400 6127600 6668 2163 7454 16883;16884 15403;15404 15403 4317 2 TPSTVTLNNNSAPANR QKAYNLNRTPSTVTLN NNSAPANRANQNFDEM R T P N R A 2 1 4 0 0 0 0 0 0 0 1 0 0 0 2 2 3 0 0 1 0 0 16 0 1655.8227 Q9ULH0 Q9ULH0 1679 1694 KIDINS220 Kinase D-interacting substrate of 220 kDa yes yes 2 0.0022115 71.085 By MS/MS By MS/MS 1 1 4278400 2361400 1917000 6669 2844 7455 16885;16886 15405;15406 15406 5847 2 TPTHQPPKPGSPGRPACPLSNLLLQSYEER TQEELSARTPTHQPPK LLQSYEERELQQRLLQ R T P E R E 1 2 1 0 1 2 2 2 1 0 4 1 0 0 7 3 2 0 1 0 0 0 30 2 3326.683 Q96F63 Q96F63 202 231 CCDC97 Coiled-coil domain-containing protein 97 yes yes 4 0.0058748 44.164 By MS/MS 1 5199600 5199600 0 6670 2483 7456 16887 15407 15407 5008 1 TPTPEPAEVETR PVVPPSVKTPTPEPAE EPAEVETRKVVLMQCN K T P T R K 1 1 0 0 0 0 3 0 0 0 0 0 0 0 3 0 3 0 0 1 0 0 12 0 1325.6463 F8W6G1;Q9UHY1 F8W6G1 439 450 NRBP1 Nuclear receptor-binding protein yes no 2 0.0089172 91.307 By MS/MS By MS/MS 1 1 26116000 14133000 11983000 6671 932 7457 16888;16889 15408;15409 15409 6475 1 TPTSPLK FIQPAAQKTPTSPLKM KTPTSPLKMKPGRPRI K T P L K M 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 1 2 0 0 0 0 0 7 0 742.4225 O60264 O60264 113 119 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.020178 88.177 By MS/MS 1 36908000 36908000 0 6672 1400 7458 16890 15410 15410 2570;6619 1 TPTSPLSPSSQK SDKGRSQKTPTSPLSP PLSPSSQKSLQFDVAG K T P Q K S 0 0 0 0 0 1 0 0 0 0 1 1 0 0 3 4 2 0 0 0 0 0 12 0 1228.6299 Q5VT06 Q5VT06 1253 1264 CEP350 Centrosome-associated protein 350 yes yes 2 0.0024003 82.069 By MS/MS By MS/MS 1 1 7377000 4077700 3299200 6673 2114 7459 16891;16892 15411;15412;15413 15413 4186;4187;6888 3 TPTSSPASSPLVAK KPLHGVLKTPTSSPAS ASSPLVAKKPLTTTPR K T P A K K 2 0 0 0 0 0 0 0 0 0 1 1 0 0 3 4 2 0 0 1 0 0 14 0 1341.714 Q14684 Q14684 728 741 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 1.2806E-128 233.28 By MS/MS By MS/MS 3 3 481950000 259890000 222060000 6674 1955 7460;7461 16893;16894;16895;16896;16897;16898 15414;15415;15416;15417;15418;15419 15419 3793;3794;3795;3796;6824 6 TPTSSPASSPLVAKKPLTTTPR KPLHGVLKTPTSSPAS KPLTTTPRRRPRAMDF K T P P R R 2 1 0 0 0 0 0 0 0 0 2 2 0 0 5 4 5 0 0 1 0 0 22 2 2236.2427 Q14684 Q14684 728 749 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 3 0.0025886 64.2 By matching By MS/MS 1 1 38598000 23261000 15336000 6675 1955 7462 16899;16900 15420 15420 3793;3794;3795;3796;6824 1 TPVEAGVSQSDAENAAPSCPDEHDTLPR VAMGKVSRTPVEAGVS DEHDTLPRRRGRPSRR R T P P R R 4 1 1 3 1 1 3 1 1 0 1 0 0 0 4 3 2 0 0 2 0 0 28 0 2949.3047 Q9H4Z2 Q9H4Z2 409 436 ZNF335 Zinc finger protein 335 yes yes 3 0.011256 44.474 By matching By MS/MS 1 1 7212000 2856300 4355700 6676 2662 7463 16901;16902 15421 15421 5426 1 TPVQYSQQQNSPQK LYEPAKMKTPVQYSQQ QQQNSPQKHKNKDLYT K T P Q K H 0 0 1 0 0 5 0 0 0 0 0 1 0 0 2 2 1 0 1 1 0 0 14 0 1631.7903 P46013 P46013 347 360 MKI67 Antigen KI-67 yes yes 2 0.0011823 88.561 By MS/MS By MS/MS 1 1 29988000 15957000 14031000 6677 1704 7464 16903;16904 15422;15423 15423 3150 2 TPVSGSLKSPVPR ENVKGGEKTPVSGSLK SLKSPVPRSDIPEPER K T P P R S 0 1 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 1 1323.751 A0A0C4DG98;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 1270 1282 THOC2 THO complex subunit 2 yes no 2;3 0.0003318 111.07 By MS/MS By MS/MS 2 2 67540000 38110000 29430000 6678 287 7465 16905;16906;16907;16908 15424;15425;15426;15427 15425 512 4 TPVSPVKFSPGDFWGR RRFIGSPRTPVSPVKF SPGDFWGRGASASTAN R T P G R G 0 1 0 1 0 0 0 2 0 0 0 1 0 2 3 2 1 1 0 2 0 0 16 1 1775.8995 P23443 P23443 444 459 RPS6KB1 Ribosomal protein S6 kinase beta-1 yes yes 3 0.0022696 65.374 By MS/MS By MS/MS 2 2 20574000 13095000 7479000 6679 1623 7466;7467 16909;16910;16911;16912 15428;15429;15430;15431 15431 3001;6687 4 TPYEAYDPIGK APPSGLERTPYEAYDP EAYDPIGKYATATRFS R T P G K Y 1 0 0 1 0 0 1 1 0 1 0 1 0 0 2 0 1 0 2 0 0 0 11 0 1252.5976 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 533 543 KIRREL Kin of IRRE-like protein 1 yes no 2 0.00010161 112.3 By MS/MS By MS/MS 3 2 17093000 13808000 3285000 6680 484 7468;7469 16913;16914;16915;16916;16917 15432;15433;15434;15435;15436 15434 7289;7290 5 TQDPSSPGTTPPQAR VEGTPASRTQDPSSPG GTTPPQARQAPAPTVI R T Q A R Q 1 1 0 1 0 2 0 1 0 0 0 0 0 0 4 2 3 0 0 0 0 0 15 0 1538.7325 Q13112 Q13112 424 438 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 0 282.09 By MS/MS By MS/MS 3 3 282000000 140620000 141380000 6681 1897 7470;7471 16918;16919;16920;16921;16922;16923 15437;15438;15439;15440;15441;15442;15443;15444 15440 3623;6785 8 TQFEDLVPSPTSEK NVDSEFARTQFEDLVP VPSPTSEKAFLAQIHA R T Q E K A 0 0 0 1 0 1 2 0 0 0 1 1 0 1 2 2 2 0 0 1 0 0 14 0 1576.7621 M0R0C4;M0QZ28;Q9Y4J8 M0R0C4 80 93 DTNA Dystrobrevin alpha yes no 2 1.4603E-21 163.9 By MS/MS By MS/MS 1 1 15906000 8886900 7018700 6682 1309 7472 16924;16925 15445;15446;15447 15446 2353;2354;6584 3 TQFEDLVPSPTSEKAFLAQIHAR NVDSEFARTQFEDLVP FLAQIHARKPGYIHSG R T Q A R K 3 1 0 1 0 2 2 0 1 1 2 1 0 2 2 2 2 0 0 1 0 0 23 1 2584.3286 M0R0C4;M0QZ28;Q9Y4J8 M0R0C4 80 102 DTNA Dystrobrevin alpha yes no 3 0.001963 56.055 By MS/MS 1 3923700 3923700 0 6683 1309 7473 16926 15448 15448 2353;2354;6584 1 TQLSPSIK RSEAQRSKTQLSPSIK TQLSPSIKRKREVSPP K T Q I K R 0 0 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 8 0 872.49673 Q8NFC6;H0Y9Y2 Q8NFC6 3016 3023 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 no no 2 0.0074835 96.143 By MS/MS By matching 1 1 22264000 11764000 10500000 6684 2353;1048 7474 16927;16928 15449 15449 1945 1 TQLSPSIKR RSEAQRSKTQLSPSIK QLSPSIKRKREVSPPG K T Q K R K 0 1 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 9 1 1028.5978 Q8NFC6;H0Y9Y2 Q8NFC6 3016 3024 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 no no 2 0.006898 110.54 By MS/MS By MS/MS 1 1 41654000 20414000 21240000 6685 2353;1048 7475 16929;16930 15450;15451 15450 1945 2 TQLSQGRSSPQLDPLR TQDTRSLKTQLSQGRS SPQLDPLRKSPTMEQA K T Q L R K 0 2 0 1 0 3 0 1 0 0 3 0 0 0 2 3 1 0 0 0 0 0 16 1 1781.9384 Q8ND56 Q8ND56 175 190 LSM14A Protein LSM14 homolog A yes yes 3 0.023885 49.066 By MS/MS By matching 1 1 18113000 11524000 6588900 6686 2340 7476 16931;16932 15452 15452 4691;4693;4694 1 TQLWASEPGTPPLPTSLPSQNPILK LIHTLDDRTQLWASEP PSQNPILKNITDYLIE R T Q L K N 1 0 1 0 0 2 1 1 0 1 4 1 0 0 6 3 3 1 0 0 0 0 25 0 2671.4221 Q9BXP5;H7C3A1 Q9BXP5 535 559 SRRT Serrate RNA effector molecule homolog yes no 2;3 1.1296E-16 111.01 By MS/MS By MS/MS 2 2 237800000 171100000 66698000 6687 2599 7477 16933;16934;16935;16936 15453;15454;15455;15456 15455 7033 4 TQMAEVLPSPR GGKAKGKKTQMAEVLP AEVLPSPRGQRVIPRI K T Q P R G 1 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 1 0 0 1 0 0 11 0 1227.6282 P11388 P11388 1205 1215 TOP2A DNA topoisomerase 2-alpha yes yes 2 3.0692E-14 167.03 By MS/MS By MS/MS 2 2 75397000 39906000 35491000 6688 1565 7478;7479 16937;16938;16939;16940 15457;15458;15459;15460;15461;15462;15463;15464 15464 190 2878 8 TQNKEESYDFSK KPEPPKAKTQNKEESY EESYDFSKSYEYKSNP K T Q S K S 0 0 1 1 0 1 2 0 0 0 0 2 0 1 0 2 1 0 1 0 0 0 12 1 1474.6576 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1059 1070 TJP2 Tight junction protein ZO-2 yes no 2 0.0040516 84.31 By matching By MS/MS 2 2 8357800 3633100 4724700 6689 368 7480 16941;16942;16943;16944 15465;15466 15465 694;7255 1 TQNKEESYDFSKSYEYK KPEPPKAKTQNKEESY FSKSYEYKSNPSAVAG K T Q Y K S 0 0 1 1 0 1 3 0 0 0 0 3 0 1 0 3 1 0 3 0 0 0 17 2 2144.9538 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1059 1075 TJP2 Tight junction protein ZO-2 yes no 3 0.0049156 54.237 By MS/MS 1 1960900 1960900 0 6690 368 7481 16945 15467 15467 694;7255 1 TQNNLESDYLAR PSRVPGTKTQNNLESD LESDYLARDGPSSNSS K T Q A R D 1 1 2 1 0 1 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 12 0 1422.6739 A0A096LNZ0;A0A096LP25;Q6ZSR9 A0A096LNZ0 144 155 AAK1 Uncharacterized protein FLJ45252 yes no 2 7.2785E-14 157.66 By MS/MS By MS/MS 1 1 7494900 3246500 4248400 6691 156 7482 16946;16947 15468;15469 15468 277;7187 2 TQPDGTSVPGEPASPISQR SITSKLPRTQPDGTSV PASPISQRLPPKVESL R T Q Q R L 1 1 0 1 0 2 1 2 0 1 0 0 0 0 4 3 2 0 0 1 0 0 19 0 1922.9334 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1728 1746 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 8.3155E-10 118.05 By MS/MS By MS/MS 2 1 234130000 116870000 117270000 6692 95 7483 16948;16949;16950 15470;15471;15472;15473 15471 176;177 4 TQPDGTSVPGEPASPISQRLPPKVESLESLYFTPIPAR SITSKLPRTQPDGTSV YFTPIPARSQAPLESS R T Q A R S 2 2 0 1 0 2 3 2 0 2 3 1 0 1 8 5 3 0 1 2 0 0 38 2 4061.111 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1728 1765 NUMA1 Nuclear mitotic apparatus protein 1 yes no 4 8.8924E-05 51.242 By MS/MS By matching 1 1 281180000 274320000 6855400 6693 95 7484 16951;16952 15474;15475 15474 176;177 2 TQPSSGVDSAVGTLPATSPQSTSVQAK EAQPPVARTQPSSGVD QSTSVQAKGTNKLRKP R T Q A K G 3 0 0 1 0 3 0 2 0 0 1 1 0 0 3 6 4 0 0 3 0 0 27 0 2600.293 Q13428 Q13428 1094 1120 TCOF1 Treacle protein yes yes 3 0.0042892 50.945 By MS/MS By MS/MS 1 1 91848000 50951000 40897000 6694 1915 7485 16953;16954 15476;15477 15476 3687;3688;6797 2 TQQSPISNGSPELGIK KKVGRKPKTQQSPISN GSPELGIKKKPREGKG K T Q I K K 0 0 1 0 0 2 1 2 0 2 1 1 0 0 2 3 1 0 0 0 0 0 16 0 1654.8526 Q15723 Q15723 182 197 ELF2 ETS-related transcription factor Elf-2 yes yes 2 0.00017616 93.766 By MS/MS By MS/MS 2 2 15217000 8603400 6613500 6695 2005 7486;7487 16955;16956;16957;16958 15478;15479;15480 15480 3911;3912 3 TQSASPPPKER NRKTGNSKTQSASPPP ASPPPKERSSSPATEQ K T Q E R S 1 1 0 0 0 1 1 0 0 0 0 1 0 0 3 2 1 0 0 0 0 0 11 1 1196.6149 Q9UN81 Q9UN81 14 24 L1RE1 LINE-1 retrotransposable element ORF1 protein yes yes 2 0.017447 66.708 By MS/MS By matching 1 1 16931000 7949500 8981500 6696 2861 7488 16959;16960 15481 15481 5898 1 TQSLSALPK PLPPGKRRTQSLSALP QSLSALPKERDSSSEK R T Q P K E 1 0 0 0 0 1 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 9 0 943.53385 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 1080 1088 CIC Protein capicua homolog yes no 2 0.0059809 83.045 By MS/MS By MS/MS 1 1 19168000 11038000 8130300 6697 1207 7489 16961;16962 15482;15483 15482 2190 2 TQSPGGCSAEAVLAR GWNSRSPRTQSPGGCS SAEAVLARKKHRRRPS R T Q A R K 3 1 0 0 1 1 1 2 0 0 1 0 0 0 1 2 1 0 0 1 0 0 15 0 1502.7147 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2 K7ESM2 74 88 HEXIM2 Protein HEXIM2 yes no 2 0.0071177 75.911 By MS/MS By MS/MS 1 1 20339000 10378000 9961500 6698 1265 7490 16963;16964 15484;15485 15484 2296 0 TQSSSCEDLPSTTQPK FKIVPSYRTQSSSCED LPSTTQPKGRQIYVRA R T Q P K G 0 0 0 1 1 2 1 0 0 0 1 1 0 0 2 4 3 0 0 0 0 0 16 0 1764.7836 Q5JS72 Q5JS72 188 203 CASK yes yes 2;3 1.4834E-20 140.89 By MS/MS By MS/MS 2 2 90333000 42226000 48106000 6699 2072 7491 16965;16966;16967;16968 15486;15487;15488;15489 15486 4068;4069 4 TQTESSTPPGIPGGSR ________________ PGIPGGSRQGPAMDGT R T Q S R Q 0 1 0 0 0 1 1 3 0 1 0 0 0 0 3 3 3 0 0 0 0 0 16 0 1570.7587 E9PER6;Q6A1A2;O15530;H3BQ10 E9PER6 4 19 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 yes no 2 0.00076871 94.454 By MS/MS By matching 1 1 14093000 8002700 6090700 6700 774 7492 16969;16970 15490 15490 6436 1 TQTPPLGQTPQLGLK PPSAQPPRTQTPPLGQ QTPQLGLKTNPPLIQE R T Q L K T 0 0 0 0 0 3 0 2 0 0 3 1 0 0 3 0 3 0 0 0 0 0 15 0 1577.8777 E9PKF8;H0Y3P2;D3DQV9;P78344 E9PKF8 11 25 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 2;3 1.0073E-09 128.74 By MS/MS By MS/MS 2 1 58991000 32418000 26573000 6701 638 7493 16971;16972;16973 15491;15492;15493 15491 6388 3 TQTPPVSPAPQPTEER LEEQARAKTQTPPVSP APQPTEERLPSSPVYE K T Q E R L 1 1 0 0 0 2 2 0 0 0 0 0 0 0 5 1 3 0 0 1 0 0 16 0 1733.8584 Q14247;H0YEV2;H0YCD9 Q14247 399 414 CTTN Src substrate cortactin yes no 2 0.0046275 69.763 By MS/MS By MS/MS 1 1 47099000 23345000 23754000 6702 1945 7494 16974;16975 15494;15495 15494 3752;6813;6814 2 TQTPPVSPAPQPTEERLPSSPVYEDAASFK LEEQARAKTQTPPVSP YEDAASFKAELSYRGP K T Q F K A 3 1 0 1 0 2 3 0 0 0 1 1 0 1 7 4 3 0 1 2 0 0 30 1 3225.583 Q14247;H0YEV2;H0YCD9 Q14247 399 428 CTTN Src substrate cortactin yes no 3 0.0085719 44.365 By MS/MS By matching 1 1 17275000 8657100 8618100 6703 1945 7495 16976;16977 15496 15496 3752;3753;6813;6814;7701 1 TQVLSPDSLFTAK QRNASYLKTQVLSPDS PDSLFTAKFVAYNEEE K T Q A K F 1 0 0 1 0 1 0 0 0 0 2 1 0 1 1 2 2 0 0 1 0 0 13 0 1405.7453 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948 A8MQ02 1674 1686 MLLT4 Afadin yes no 2 0.0063307 68.972 By MS/MS By MS/MS 1 1 18068000 11000000 7068500 6704 431 7496 16978;16979 15497;15498 15498 821 2 TQVWHQISTK T Q T K 0 0 0 0 0 2 0 0 1 1 0 1 0 0 0 1 2 1 0 1 0 0 10 0 1226.6408 REV__A0A0A0MRD9 yes no 2 0.009233 72.2 By MS/MS By MS/MS 2 2 14146000 7346100 6800100 + 6705 2959 7497 16980;16981;16982;16983 15499;15500 15499 6144 2 TQYNQVPSEDFER SNMEGYSKTQYNQVPS VPSEDFERTPQSPTLP K T Q E R T 0 1 1 1 0 2 2 0 0 0 0 0 0 1 1 1 1 0 1 1 0 0 13 0 1611.7165 P78310 P78310 316 328 CXADR Coxsackievirus and adenovirus receptor yes yes 2 2.1138E-05 118.9 By MS/MS By MS/MS 1 1 14805000 9391100 5413900 6706 1812 7498 16984;16985 15501;15502 15501 7658 2 TQYNQVPSEDFERTPQSPTLPPAK SNMEGYSKTQYNQVPS SPTLPPAKVAAPNLSR K T Q A K V 1 1 1 1 0 3 2 0 0 0 1 1 0 1 5 2 3 0 1 1 0 0 24 1 2729.3297 P78310 P78310 316 339 CXADR Coxsackievirus and adenovirus receptor yes yes 3 0.025132 41.136 By MS/MS By matching 1 1 6424200 3060600 3363600 6707 1812 7499 16986;16987 15503 15503 3382;7658 1 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ GLPQGEARTRDDGDEE DADDGALQ________ R T R L Q - 2 1 0 7 0 2 6 3 2 0 4 0 0 0 0 2 3 0 0 0 0 0 32 1 3526.4728 Q9UKM9 Q9UKM9 275 306 RALY RNA-binding protein Raly yes yes 3;4 0.0010645 50.865 By MS/MS By MS/MS 2 2 250520000 144960000 105560000 6708 2833 7500 16988;16989;16990;16991 15504;15505;15506 15506 5833 3 TRHGSASQVQK TGHCNSGRTRHGSASQ GSASQVQKQRSAGSFK R T R Q K Q 1 1 0 0 0 2 0 1 1 0 0 1 0 0 0 2 1 0 0 1 0 0 11 1 1197.6214 J3QSG6;H0Y465;P21359 J3QSG6 608 618 NF1 Neurofibromin;Neurofibromin truncated yes no 3 0.00045128 103.13 By MS/MS By MS/MS 1 1 1629700 0 1629700 6709 1016 7501 16992;16993 15507;15508 15508 1877;1878 2 TRHSPTPQQSNR PPATPPPKTRHSPTPQ PTPQQSNRTRKSRVSV K T R N R T 0 2 1 0 0 2 0 0 1 0 0 0 0 0 2 2 2 0 0 0 0 0 12 1 1407.6967 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 406 417 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2;3 0.01228 71.98 By MS/MS By MS/MS 2 1 70650000 68578000 2072200 6710 442;1311 7502;7503 16994;16995;16996 15509;15510 15509 865 2 TRLSPPR STPPPYERTRLSPPRA RTRLSPPRASYDDPYK R T R P R A 0 2 0 0 0 0 0 0 0 0 1 0 0 0 2 1 1 0 0 0 0 0 7 1 825.48209 Q96PK6 Q96PK6 579 585 RBM14 RNA-binding protein 14 yes yes 2 0.029478 85.29 By MS/MS By matching 1 1 183800000 92323000 91477000 6711 2524 7504 16997;16998 15511 15511 1 TRLSTASEETVQNR PPICLRRRTRLSTASE SEETVQNRVSLEKVLG R T R N R V 1 2 1 0 0 1 2 0 0 0 1 0 0 0 0 2 3 0 0 1 0 0 14 1 1590.7962 O43379;H7C3R4 O43379 46 59 WDR62 WD repeat-containing protein 62 yes no 2;3 3.4889E-05 115.2 By MS/MS By MS/MS 1 2 21654000 9227300 12426000 6712 1381 7505;7506 16999;17000;17001 15512;15513;15514 15513 6610;6611 3 TRNGFPLPLAREVSNK PFGWTPGKTRNGFPLP LAREVSNKIVGYLNEE K T R N K I 1 2 2 0 0 0 1 1 0 0 2 1 0 1 2 1 1 0 0 1 0 0 16 2 1797.985 J3KT11;F5H386;P22079 J3KT11 62 77 LPO Lactoperoxidase yes no 2 0.012898 64.843 By MS/MS By matching 2 2 3673200000 2830400000 842810000 6713 883 7507 17002;17003;17004;17005 15515;15516 15515 1588 2 TRPGSFQSLSDALSDTPAK LSSFFRGRTRPGSFQS ALSDTPAKSYAPELGR R T R A K S 2 1 0 2 0 1 0 1 0 0 2 1 0 1 2 4 2 0 0 0 0 0 19 1 1976.9803 G3V4K3;Q9H9C1 G3V4K3 143 161 VIPAS39 Spermatogenesis-defective protein 39 homolog yes no 2;3 2.7753E-28 142.54 By MS/MS By MS/MS 2 2 90029000 49516000 40514000 6714 974 7508 17006;17007;17008;17009 15517;15518;15519;15520 15520 1774;1775;1776 4 TRQPDAKDGDSYDPYDFSDTEEEMPQVHTPK EQKRKRRKTRQPDAKD MPQVHTPKTADSQETK K T R P K T 1 1 0 6 0 2 3 1 1 0 0 2 1 1 4 2 3 0 2 1 0 0 31 2 3597.5478 Q7Z6P5;J3KQ69;P25205 Q7Z6P5 189 219 MCM3 DNA replication licensing factor MCM3 yes no 4 6.918E-05 63.085 By MS/MS By MS/MS 2 2 44362000 27468000 16894000 6715 1233 7509;7510 17010;17011;17012;17013 15521;15522;15523 15521 140 2235;6562 3 TRSLSSLR NHSSSLARTRSLSSLR TRSLSSLREKGMYDVQ R T R L R E 0 2 0 0 0 0 0 0 0 0 2 0 0 0 0 3 1 0 0 0 0 0 8 1 918.52468 H0Y9X0;O94915 H0Y9X0 846 853 FRYL Protein furry homolog-like yes no 2 0.028739 70.552 By matching By MS/MS 1 1 25613000 13629000 11984000 6716 1047 7511 17014;17015 15524 15524 1 TRSNPEGAEDR HSAEPRPRTRSNPEGA NPEGAEDRAVGAQASV R T R D R A 1 2 1 1 0 0 2 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 11 1 1230.5589 M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;M0R2I2;J3KQS6;Q9NWV8;M0R3H9 M0QXG9 27 37 BABAM1 BRISC and BRCA1-A complex member 1 yes no 2 0.0005453 109.15 By MS/MS By matching 1 1 54499000 32670000 21829000 6717 1236 7512 17016;17017 15525 15525 2242 1 TRSNPEGAEDRAVGAQASVGSR HSAEPRPRTRSNPEGA AQASVGSRSEGEGEAA R T R S R S 4 3 1 1 0 1 2 3 0 0 0 0 0 0 1 3 1 0 0 2 0 0 22 2 2214.0737 M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;M0R2I2;J3KQS6;Q9NWV8 M0QXG9 27 48 BABAM1 BRISC and BRCA1-A complex member 1 yes no 3 0.007624 50.857 By MS/MS By MS/MS 1 1 52336000 32377000 19959000 6718 1236 7513 17018;17019 15526;15527 15526 2242 2 TRSPDVISSASTALSQDIPEIASEALSR LPQASPSRTRSPDVIS IASEALSRGFGSSAPE R T R S R G 4 2 0 2 0 1 2 0 0 3 2 0 0 0 2 7 2 0 0 1 0 0 28 1 2900.4727 Q6P2E9 Q6P2E9 727 754 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 3 0.00027596 61.45 By MS/MS 1 15532000 15532000 0 6719 2153 7514 17020 15528 15528 6904 1 TRSPSPDDILER SSPQSSTRTRSPSPDD SPDDILERVAADVKEY R T R E R V 0 2 0 2 0 0 1 0 0 1 1 0 0 0 2 2 1 0 0 0 0 0 12 1 1384.6947 Q13523;H0YDJ3 Q13523 576 587 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 2 0.006661 97.214 By MS/MS By matching 1 1 20794000 10658000 10137000 6720 1921 7515 17021;17022 15529 15529 3707;3708 1 TRSWDSSSPVDRPEPEAASPTTR SPGPIVSRTRSWDSSS EAASPTTRTRPVTRSM R T R T R T 2 3 0 2 0 0 2 0 0 0 0 0 0 0 4 5 3 1 0 1 0 0 23 2 2528.1892 C9J0I9;Q86WB0 C9J0I9 309 331 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.00074737 63.563 By MS/MS By MS/MS 3 3 298350000 174750000 123600000 6721 551 7516;7517;7518 17023;17024;17025;17026;17027;17028 15530;15531;15532 15530 1010;1011;1012;1013 3 TRSYDNLTTACDNTVPLASR PPLSRLPKTRSYDNLT NTVPLASRRCSDPSLN K T R S R R 2 2 2 2 1 0 0 0 0 0 2 0 0 0 1 2 4 0 1 1 0 0 20 1 2254.0648 G5E953;Q13615 G5E953 475 494 MTMR3 Myotubularin-related protein 3 yes no 2;3 1.3574E-09 102.07 By MS/MS By MS/MS 2 2 65507000 31718000 33789000 6722 989 7519 17029;17030;17031;17032 15533;15534;15535 15533 1805;6496 3 TRTFSATVR PSPLPTRRTRTFSATV RTFSATVRASQGPVYK R T R V R A 1 2 0 0 0 0 0 0 0 0 0 0 0 1 0 1 3 0 0 1 0 0 9 1 1037.5618 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 48 56 CARHSP1 Calcium-regulated heat stable protein 1 yes no 2;3 0.00078875 120.55 By MS/MS By MS/MS 2 2 368690000 189610000 179080000 6723 1122 7520 17033;17034;17035;17036 15536;15537;15538 15536 2050 3 TRTPASINATPANINLADLTR ITPSSSSRTRTPASIN INLADLTRAVNALPQN R T R T R A 4 2 3 1 0 0 0 0 0 2 2 0 0 0 2 1 4 0 0 0 0 0 21 1 2209.1815 Q7KZ85 Q7KZ85 1530 1550 SUPT6H Transcription elongation factor SPT6 yes yes 3 6.2802E-06 83.395 By MS/MS By MS/MS 2 2 41731000 22413000 19317000 6724 2196 7521;7522 17037;17038;17039;17040 15539;15540;15541;15542;15543 15541 4373;6928;6929 5 TRTSQEELLAEVVQGQSR QTLPVAPRTRTSQEEL EVVQGQSRTPRISPPI R T R S R T 1 2 0 0 0 3 3 1 0 0 2 0 0 0 0 2 2 0 0 2 0 0 18 1 2030.0392 H0YJA2;Q6PJT7;G3V256;A0A087WTC9;G3V5I6 H0YJA2 303 320 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 3 2.6198E-06 101.05 By matching By MS/MS 1 1 11784000 7583300 4200400 6725 1080 7523 17041;17042 15544 15544 1997;6530 1 TSAAACAVTDLSDDSDFDEK PKPKSVSKTSAAACAV DDSDFDEKAKLKYYKE K T S E K A 4 0 0 5 1 0 1 0 0 0 1 1 0 1 0 3 2 0 0 1 0 0 20 0 2116.8743 Q9NQZ2 Q9NQZ2 354 373 UTP3 Something about silencing protein 10 yes yes 2 6.1813E-05 77.899 By MS/MS By matching 1 1 8575400 4967700 3607700 6726 2715 7524 17043;17044 15545 15545 5540;5541;7061 1 TSAAACAVTDLSDDSDFDEKAK PKPKSVSKTSAAACAV SDFDEKAKLKYYKEIE K T S A K L 5 0 0 5 1 0 1 0 0 0 1 2 0 1 0 3 2 0 0 1 0 0 22 1 2316.0064 Q9NQZ2 Q9NQZ2 354 375 UTP3 Something about silencing protein 10 yes yes 2;3 7.0932E-10 102.59 By MS/MS By MS/MS 3 3 193800000 108580000 85214000 6727 2715 7525;7526 17045;17046;17047;17048;17049;17050 15546;15547;15548;15549;15550;15551 15551 5540;5541;7061 6 TSADAQEPASPVVSPQQSPPTSPHTWR SHDTVQPRTSADAQEP PTSPHTWRKHSRHPSG R T S W R K 3 1 0 1 0 3 1 0 1 0 0 0 0 0 6 5 3 1 0 2 0 0 27 0 2857.3631 E9PMG1;H0YDT0;Q96D71;F2Z3L2 E9PMG1 153 179 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 3 0.0079708 48.867 By MS/MS By matching 1 1 35864000 15854000 20010000 6728 828 7527 17051;17052 15552 15552 1486;1487;1488;1489;6450 1 TSAMLTVRAMPSK LCMCGKERTSAMLTVR TVRAMPSKFIEGLRNE R T S S K F 2 1 0 0 0 0 0 0 0 0 1 1 2 0 1 2 2 0 0 1 0 0 13 1 1391.7265 A6NGQ3;Q5VST9;H3BQA7 A6NGQ3 4132 4144 OBSCN Obscurin yes no 2 0.024589 58.781 By MS/MS 1 0 0 0 6729 414 7528 17053 15553 15553 1 TSAPSPTALK VNVHINTRTSAPSPTA APSPTALKLATVAASM R T S L K L 2 0 0 0 0 0 0 0 0 0 1 1 0 0 2 2 2 0 0 0 0 0 10 0 971.52876 Q52LR7 Q52LR7 750 759 EPC2 Enhancer of polycomb homolog 2 yes yes 2 0.011346 69.864 By MS/MS By MS/MS 1 1 4730400 2498700 2231700 6730 2052 7529 17054;17055 15554;15555 15555 4032 2 TSAQTTPSKIPR PPKSPEGKTSAQTTPS TTPSKIPRYKGQGKKK K T S P R Y 1 1 0 0 0 1 0 0 0 1 0 1 0 0 2 2 3 0 0 0 0 0 12 1 1285.699 O95684 O95684 165 176 FGFR1OP FGFR1 oncogene partner yes yes 3 0.0079293 64.798 By MS/MS By matching 1 1 6999700 2737300 4262400 6731 1496 7530 17056;17057 15556 15556 6648 1 TSAVSSPLLDQQR SASKKDRKTSAVSSPL SPLLDQQRNSKTNQSK K T S Q R N 1 1 0 1 0 2 0 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 13 0 1400.726 Q5T200;A0A087WX14 Q5T200 237 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 3.0688E-16 163.33 By MS/MS By MS/MS 1 1 59232000 30085000 29147000 6732 2094 7531 17058;17059 15557;15558 15558 4132 2 TSDANETEDHLESLICK GQPHKRRKTSDANETE HLESLICKVGEKSACS K T S C K V 1 0 1 2 1 0 3 0 1 1 2 1 0 0 0 2 2 0 0 0 0 0 17 0 1960.8684 F2Z2T1;Q09161 F2Z2T1 21 37 NCBP1 Nuclear cap-binding protein subunit 1 yes no 3 0.0071938 58.723 By MS/MS By matching 1 1 7875000 4450800 3424200 6733 849 7532 17060;17061 15559 15559 1533;6457 1 TSDIFGSPVTATSR HLNPPGGKTSDIFGSP SPVTATSRLAHPNKPK K T S S R L 1 1 0 1 0 0 0 1 0 1 0 0 0 1 1 3 3 0 0 1 0 0 14 0 1437.71 H3BMT0;H3BTV5;H3BU16;A6NGP5;H3BMV3;Q9H910 H3BMT0 75 88 HN1L Hematological and neurological expressed 1-like protein yes no 2 1.0551E-12 136.57 By MS/MS 1 53927000 53927000 0 6734 413 7533 17062 15560 15560 779 1 TSDSPWFLSGSETLGR GRTSRPGRTSDSPWFL SGSETLGRLAGNTLGS R T S G R L 0 1 0 1 0 0 1 2 0 0 2 0 0 1 1 4 2 1 0 0 0 0 16 0 1738.8162 E7EMW7;O95071 E7EMW7 107 122 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.0012799 85.288 By MS/MS By MS/MS 1 1 32651000 17881000 14769000 6735 707 7534 17063;17064 15561;15562 15561 1255;1256;6413 2 TSDVGGYYYEKIER ESYEKTTRTSDVGGYY YYYEKIERTTKSPSDS R T S E R T 0 1 0 1 0 0 2 2 0 1 0 1 0 0 0 1 1 0 3 1 0 0 14 1 1678.7839 P46821 P46821 1898 1911 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 2.2697E-21 161.87 By MS/MS By MS/MS 3 3 60837000 36451000 24386000 6736 1712 7535;7536 17065;17066;17067;17068;17069;17070 15563;15564;15565;15566;15567;15568 15565 3187;7621;7622;7623 6 TSDVSSNKSTNHER RGSPMMNRTSDVSSNK NKSTNHERKSTLTPTQ R T S E R K 0 1 2 1 0 0 1 0 1 0 0 1 0 0 0 4 2 0 0 1 0 0 14 1 1560.7128 A0A088AWL3 A0A088AWL3 1409 1422 NCOR1 yes yes 2 0.020895 50.194 By MS/MS 1 0 0 0 6737 151 7537 17071 15569 15569 271;272 1 TSEIEPKNSPEDLGLSLTGDSCK SLTVECSKTSEIEPKN SLTGDSCKLMLSTSEY K T S C K L 0 0 1 2 1 0 3 2 0 1 3 2 0 0 2 4 2 0 0 0 0 0 23 1 2476.1639 Q12888;A6NNK5;C9JXV0 Q12888 492 514 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 1.8301E-06 83.395 By matching By MS/MS 1 1 33926000 18972000 14955000 6738 1882 7538 17072;17073 15570 15570 3580 1 TSENTAEFKER FPKETDIKTSENTAEF NTAEFKERELCPLKTS K T S E R E 1 1 1 0 0 0 3 0 0 0 0 1 0 1 0 1 2 0 0 0 0 0 11 1 1310.6103 H0Y2M0;A2VDJ0 H0Y2M0 870 880 KIAA0922 Transmembrane protein 131-like yes no 2 0.012256 70.685 By MS/MS By matching 1 1 27216000 14722000 12493000 6739 403 7539 17074;17075 15571 15571 770 1 TSFSVGSDDELGPIR LGRFASYRTSFSVGSD DDELGPIRKKEEDQAS R T S I R K 0 1 0 2 0 0 1 2 0 1 1 0 0 1 1 3 1 0 0 1 0 0 15 0 1578.7526 Q9NRY4 Q9NRY4 1173 1187 ARHGAP35 Rho GTPase-activating protein 35 yes yes 2 1.5294E-14 130.27 By MS/MS By MS/MS 1 1 84064000 43979000 40085000 6740 2725 7540 17076;17077 15572;15573;15574 15574 5571 3 TSGPLSPPTGPPGPAPAGPAVR PERGSEKKTSGPLSPP APAGPAVRLGSVPYSL K T S V R L 3 1 0 0 0 0 0 4 0 0 1 0 0 0 8 2 2 0 0 1 0 0 22 0 1980.0429 P49815;H3BMQ0 P49815 659 680 TSC2 Tuberin yes no 3 0.0052991 50.029 By MS/MS 1 2121700 2121700 0 6741 1731 7541 17078 15575 15575 3275 1 TSGVPGNRPGSVIR IPLTETNKTSGVPGNR NRPGSVIRVYGDENSD K T S I R V 0 2 1 0 0 0 0 3 0 1 0 0 0 0 2 2 1 0 0 2 0 0 14 1 1395.7583 A0A087X2D8;O60271 A0A087X2D8 1169 1182 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2 0.026656 56.793 By matching By MS/MS 1 1 10993000 4721800 6271000 6742 148 7542 17079;17080 15576 15576 1 TSIGQQGYGSSPK T S P K 0 0 0 0 0 2 0 3 0 1 0 1 0 0 1 3 1 0 1 0 0 0 13 0 1308.631 REV__Q6ZRR7 yes yes 2 0.015782 68.676 By MS/MS By MS/MS 2 2 138310000 66774000 71537000 + 6743 3002 7543 17081;17082;17083;17084 15577;15578 15578 6194 2 TSLDIEEYSDTEVQK ________________ YSDTEVQKNQVLTLEE R T S Q K N 0 0 0 2 0 1 3 0 0 1 1 1 0 0 0 2 2 0 1 1 0 0 15 0 1755.8051 P51580 P51580 6 20 TPMT Thiopurine S-methyltransferase yes yes 2 2.862E-45 181.26 By MS/MS By MS/MS 1 1 21453000 11106000 10347000 6744 1744 7544 17085;17086 15579;15580 15579 3297 2 TSLEASMEASPK AMVKASPKTSLEASME ASMEASPKAKARDAPK K T S P K A 2 0 0 0 0 0 2 0 0 0 1 1 1 0 1 3 1 0 0 0 0 0 12 0 1249.586 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 411 422 MAP7D3 MAP7 domain-containing protein 3 yes no 2 6.1854E-62 201.76 By MS/MS By MS/MS 1 1 16515000 9623600 6891500 6745 195 7545 17087;17088 15581;15582 15581 355 2 TSLGSTLSLTR QVGSVVHRTSLGSTLS GSTLSLTRSPCALPLA R T S T R S 0 1 0 0 0 0 0 1 0 0 3 0 0 0 0 3 3 0 0 0 0 0 11 0 1134.6245 G5E953;Q13615 G5E953 766 776 MTMR3 Myotubularin-related protein 3 yes no 2 0.016912 73.881 By MS/MS 1 0 0 0 6746 989 7546 17089 15583 15583 1806 1 TSLITEEEDSTSEVLDEELK EIMDDSLKTSLITEEE EVLDEELKLQPFNSSE K T S L K L 0 0 0 2 0 0 6 0 0 1 3 1 0 0 0 3 3 0 0 1 0 0 20 0 2266.0588 D6RB01;Q9Y6X4 D6RB01 378 397 FAM169A Soluble lamin-associated protein of 75 kDa yes no 2 0.011786 53.554 By MS/MS By matching 1 1 7996400 4611900 3384600 6747 656 7547 17090;17091 15584 15584 1186 1 TSLMSAESPTPR EEEVCDERTSLMSAES SAESPTPRSCQEGRQG R T S P R S 1 1 0 0 0 0 1 0 0 0 1 0 1 0 2 3 2 0 0 0 0 0 12 0 1275.6129 E5RHT1;B1AP22;P49810 E5RHT1 18 29 PSEN2 Presenilin;Presenilin-2;Presenilin-2 NTF subunit;Presenilin-2 CTF subunit yes no 2 1.3673E-07 128.35 By MS/MS By MS/MS 1 1 20119000 10999000 9119700 6748 468 7548 17092;17093 15585;15586 15586 895 2 TSLPLSPVK DYFPSPSKTSLPLSPV SLPLSPVKTAPLFSND K T S V K T 0 0 0 0 0 0 0 0 0 0 2 1 0 0 2 2 1 0 0 1 0 0 9 0 940.55933 Q86XL3 Q86XL3 263 271 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0030306 97.452 By MS/MS By MS/MS 1 1 13342000 7533800 5808400 6749 2252 7549 17094;17095 15587;15588 15587 4518 2 TSLPLSPVKTAPLFSNDR DYFPSPSKTSLPLSPV APLFSNDRLKDGLCLS K T S D R L 1 1 1 1 0 0 0 0 0 0 3 1 0 1 3 3 2 0 0 1 0 0 18 1 1942.0524 Q86XL3 Q86XL3 263 280 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.00054773 73.208 By MS/MS By MS/MS 1 1 3734900 2035400 1699400 6750 2252 7550 17096;17097 15589;15590 15590 4518 2 TSLPSPMFSR SNGIKKHRTSLPSPMF LPSPMFSRNDFSIWSI R T S S R N 0 1 0 0 0 0 0 0 0 0 1 0 1 1 2 3 1 0 0 0 0 0 10 0 1121.5539 Q9BXW6;J3KRT6 Q9BXW6 535 544 OSBPL1A Oxysterol-binding protein-related protein 1 yes no 1 0.025455 41.283 By MS/MS 1 1618500 1618500 0 6751 2602 7551 17098 15591 15591 1 TSLPTVGPSGLYSPSTNR HSIVQATRTSLPTVGP LYSPSTNRGPIQMKIP R T S N R G 0 1 1 0 0 0 0 2 0 0 2 0 0 0 3 4 3 0 1 1 0 0 18 0 1832.9268 Q6VMQ6 Q6VMQ6 887 904 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 2 1.1079E-05 91.926 By MS/MS By MS/MS 1 1 13975000 8721500 5253000 6752 2172 7552 17099;17100 15592;15593 15592 4340;4341 2 TSLSALTQLMK TKKATEGKTSLSALTQ SALTQLMKKMPHFRKQ K T S M K K 1 0 0 0 0 1 0 0 0 0 3 1 1 0 0 2 2 0 0 0 0 0 11 0 1191.6533 O00186 O00186 322 332 STXBP3 Syntaxin-binding protein 3 yes yes 2 0.011153 68.44 By MS/MS 1 2339800 0 2339800 6753 1323 7553 17101 15594 15594 2386 1 TSLSVDQAPTPK SSNSAFSRTSLSVDQA VDQAPTPKAGRSQPCV R T S P K A 1 0 0 1 0 1 0 0 0 0 1 1 0 0 2 2 2 0 0 1 0 0 12 0 1242.6456 Q9P266 Q9P266 767 778 KIAA1462 Junctional protein associated with coronary artery disease yes yes 2 0.0022536 89.747 By MS/MS By MS/MS 1 1 4007500 2343100 1664500 6754 2784 7554 17102;17103 15595;15596 15595 5717 2 TSMGGTQQQFVEGVR AHQDTQRRTSMGGTQQ QQFVEGVRMEEIVEGC R T S V R M 0 1 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 15 0 1623.7675 B4DGU4;P35222 B4DGU4 544 558 CTNNB1 Catenin beta-1 yes no 2 0.0080506 77.593 By MS/MS By MS/MS 2 2 42422000 22548000 19874000 6755 481 7555;7556 17104;17105;17106;17107 15597;15598;15599 15599 53 910;6348;6349 3 TSNKFGSLEKR SIGKEIAKTSNKFGSL KFGSLEKRTPTKCTTE K T S K R T 0 1 1 0 0 0 1 1 0 0 1 2 0 1 0 2 1 0 0 0 0 0 11 2 1265.6728 Q15058 Q15058 266 276 KIF14 Kinesin-like protein KIF14 yes yes 3 0.0085063 67.648 By matching By MS/MS 1 1 4708200 3157000 1551200 6756 1974 7557 17108;17109 15600 15600 3844 1 TSNSYTAGGLFK YSVKAQFKTSNSYTAG YTAGGLFKESWRGGGG K T S F K E 1 0 1 0 0 0 0 2 0 0 1 1 0 1 0 2 2 0 1 0 0 0 12 0 1244.6037 Q9P2Q2;A0A0J9YYA7 Q9P2Q2 869 880 FRMD4A FERM domain-containing protein 4A yes no 2 0.021789 70.552 By MS/MS 1 0 0 0 6757 2798 7558 17110 15601 15601 1 TSPGGRTSPEAR EGQGGAGRTSPGGRTS GRTSPEARGRRSPILL R T S A R G 1 2 0 0 0 0 1 2 0 0 0 0 0 0 2 2 2 0 0 0 0 0 12 1 1214.6004 Q8TD16 Q8TD16 567 578 BICD2 Protein bicaudal D homolog 2 yes yes 2 0.030565 58.63 By MS/MS 1 5811600 5811600 0 6758 2378 7559 17111 15602 15602 1 TSPGRSSCRCTTPSSGLQR SRTCWDYRTSPGRSSC TPSSGLQRP_______ R T S Q R P 0 3 0 0 2 1 0 2 0 0 1 0 0 0 2 5 3 0 0 0 0 0 19 2 2093.9695 I3L266 I3L266 114 132 SLC26A11 yes yes 3 0.029092 44.3 By MS/MS 1 0 0 0 6759 1204 7560 17112 15603 15603 1 TSPKPAVVETVTTAKPQQIQALMDEVTK RFGGGQAKTSPKPAVV ALMDEVTKQV______ K T S T K Q 3 0 0 1 0 3 2 0 0 1 1 3 1 0 3 1 5 0 0 4 0 0 28 2 3009.6056 H0YI94;H0YIP0;P56192 H0YI94 90 117 MARS Methionine--tRNA ligase, cytoplasmic yes no 4 6.571E-06 70.504 By MS/MS By matching 1 1 15809000 12037000 3772100 6760 1076 7561 17113;17114 15604 15604 1987;6528 1 TSPLKDNPSPEPQLDDIKR TKPPVGPKTSPLKDNP PQLDDIKRELRAEVDI K T S K R E 0 1 1 3 0 1 1 0 0 1 2 2 0 0 4 2 1 0 0 0 0 0 19 2 2149.1015 Q96JC9 Q96JC9 157 175 EAF1 ELL-associated factor 1 yes yes 3 0.011683 51.554 By MS/MS By matching 1 1 16610000 10759000 5851500 6761 2506 7562 17115;17116 15605 15605 5044 1 TSPPLLDR AYERVSGRTSPPLLDR TSPPLLDRARSRTPPS R T S D R A 0 1 0 1 0 0 0 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 8 0 897.49198 Q9UQ35 Q9UQ35 2397 2404 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.023452 68.847 By matching By MS/MS 1 1 98781000 52730000 46051000 6762 2877 7563 17117;17118 15606 15606 7118 1 TSPQVLGSILK KAYELEKRTSPQVLGS QVLGSILKSGTTSESG R T S L K S 0 0 0 0 0 1 0 1 0 1 2 1 0 0 1 2 1 0 0 1 0 0 11 0 1141.6707 Q7Z417 Q7Z417 571 581 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0066587 73.985 By matching By MS/MS 1 1 17438000 7987400 9450500 6763 2214 7564 17119;17120 15607 15607 4412 1 TSPSGGTWSSVVSGAK AATPPVARTSPSGGTW SSVVSGAKDSRLQDQR R T S A K D 1 0 0 0 0 0 0 3 0 0 0 1 0 0 1 5 2 1 0 2 0 0 16 0 1506.7314 F8W0B5 F8W0B5 110 125 ATXN2 no no 2 0.013525 63.662 By MS/MS 1 2403300 2403300 0 6764 929 7565 17121 15608 15608 1668 0 TSPSGGTWSSVVSGVPR AATPPVARTSPSGGTW SVVSGVPRLSPKTHRP R T S P R L 0 1 0 0 0 0 0 3 0 0 0 0 0 0 2 5 2 1 0 3 0 0 17 0 1659.8216 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700 H0YH87 587 603 ATXN2 Ataxin-2 yes no 2 0.00015451 90.259 By MS/MS By MS/MS 1 1 31718000 16629000 15090000 6765 912 7566 17122;17123 15609;15610 15609 1644;6473 2 TSPSKSPFLHSGMK LPRPMENRTSPSKSPF PFLHSGMKMQKAGPPV R T S M K M 0 0 0 0 0 0 0 1 1 0 1 2 1 1 2 4 1 0 0 0 0 0 14 1 1502.7551 O14497;H0Y488;A0A1B0GTU5;H0YEW5 O14497 1599 1612 ARID1A AT-rich interactive domain-containing protein 1A yes no 3 0.024342 49.298 By MS/MS 1 2283800 0 2283800 6766 1339 7567 17124 15611 15611 1 TSPSSPAPLPHQEATPR SADRKAERTSPSSPAP PHQEATPRASKGAQAG R T S P R A 2 1 0 0 0 1 1 0 1 0 1 0 0 0 5 3 2 0 0 0 0 0 17 0 1771.8853 P04920 P04920 169 185 SLC4A2 Anion exchange protein 2 yes yes 2 0.01094 57.106 By matching By MS/MS 1 1 9875500 5285300 4590100 6767 1523 7568 17125;17126 15612 15612 2809 1 TSPTNEKTQLGK NILDYFRKTSPTNEKT NEKTQLGKECKIKSPE K T S G K E 0 0 1 0 0 1 1 1 0 0 1 2 0 0 1 1 3 0 0 0 0 0 12 1 1302.6779 A0A075B754;Q96QE3 A0A075B754 69 80 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.030978 40.577 By MS/MS 1 0 0 0 6768 12 7569 17127 15613 15613 1 TSPTPGDFPK DMVKWDSRTSPTPGDF PTPGDFPKGLVARDNT R T S P K G 0 0 0 1 0 0 0 1 0 0 0 1 0 1 3 1 2 0 0 0 0 0 10 0 1045.508 Q9UPU7;C9JW56 Q9UPU7 154 163 TBC1D2B TBC1 domain family member 2B yes no 2 0.013563 84.31 By matching By MS/MS 1 1 3638500 1483200 2155400 6769 2872 7570 17128;17129 15614 15614 5935 1 TSQCSSPSLSASPGSPTRPQIR GRPRTGLKTSQCSSPS SPTRPQIRQKIENKPL K T S I R Q 1 2 0 0 1 2 0 1 0 1 1 0 0 0 4 7 2 0 0 0 0 0 22 1 2300.1179 H0YMD3;H0YND9;P37275 H0YMD3 90 111 ZEB1 Zinc finger E-box-binding homeobox 1 yes no 3 0.0028666 57.366 By MS/MS By matching 1 1 13509000 8149600 5359900 6770 1099 7571 17130;17131 15615 15615 2022;2023;2024 1 TSQLGDSPFYPGK LGNSSILKTSQLGDSP DSPFYPGKTTYGGAAA K T S G K T 0 0 0 1 0 1 0 2 0 0 1 1 0 1 2 2 1 0 1 0 0 0 13 0 1395.667 P49790 P49790 251 263 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.0067387 67.704 By MS/MS 1 3186800 0 3186800 6771 1729 7572 17132 15616 15616 3254 1 TSQVGAASAPAKESPR LQAKASGKTSQVGAAS APAKESPRKGAAPAPP K T S P R K 4 1 0 0 0 1 1 1 0 0 0 1 0 0 2 3 1 0 0 1 0 0 16 1 1555.7954 Q13428;J3KQ96;E7ETY2 Q13428 368 383 TCOF1 Treacle protein yes no 2;3 1.3753E-06 114.88 By MS/MS By MS/MS 2 2 542150000 286370000 255780000 6772 1915 7573 17133;17134;17135;17136 15617;15618;15619;15620 15620 3676 4 TSQVGAASAPAKESPRK LQAKASGKTSQVGAAS PAKESPRKGAAPAPPG K T S R K G 4 1 0 0 0 1 1 1 0 0 0 2 0 0 2 3 1 0 0 1 0 0 17 2 1683.8904 Q13428;J3KQ96;E7ETY2 Q13428 368 384 TCOF1 Treacle protein yes no 3 0.0010326 72.968 By MS/MS By matching 1 1 12447000 3807300 8639300 6773 1915 7574 17137;17138 15621 15621 3676 1 TSRSTPLSPAYISLVEEEDQHMK KFPVPVLKTSRSTPLS EEEDQHMKLSLGGSEM K T S M K L 1 1 0 1 0 1 3 0 1 1 2 1 1 0 2 4 2 0 1 1 0 0 23 1 2617.2694 Q9P2N7 Q9P2N7 22 44 KLHL13 Kelch-like protein 13 yes yes 3 0.016777 47.016 By MS/MS 1 23694000 23694000 0 6774 2796 7575 17139 15622 15622 5734;5735;5736 0 TSSAELSTSAPDEPLLQK LTGVSTIRTSSAELST PDEPLLQKSPSESFIG R T S Q K S 2 0 0 1 0 1 2 0 0 0 3 1 0 0 2 4 2 0 0 0 0 0 18 0 1872.9317 Q15139 Q15139 217 234 PRKD1 Serine/threonine-protein kinase D1 yes yes 2 3.4756E-13 127.83 By MS/MS By MS/MS 1 1 26389000 14029000 12360000 6775 1978 7576 17140;17141 15623;15624 15623 3857;3858;6829 2 TSSAFVGKTPEASPEPK DSMETEEKTSSAFVGK PEASPEPKDQTLKMIK K T S P K D 2 0 0 0 0 0 2 1 0 0 0 2 0 1 3 3 2 0 0 1 0 0 17 1 1731.8679 A0A087WW66;Q99460 A0A087WW66 303 319 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 2 0.005455 69.975 By MS/MS By matching 1 1 14230000 7664400 6565200 6776 72 7577 17142;17143 15625 15625 126;6233 1 TSSDSALHTSVMNPSPQDTYPGPTPPSILPSR RLPSALNRTSSDSALH PPSILPSRRGGILDGE R T S S R R 1 1 1 2 0 1 0 1 1 1 2 0 1 0 7 7 4 0 1 1 0 0 32 0 3336.5932 Q53ET0;H0YDQ8 Q53ET0 169 200 CRTC2 CREB-regulated transcription coactivator 2 yes no 3 0.016552 43.985 By matching By MS/MS 1 1 28383000 17742000 10641000 6777 2054 7578 17144;17145 15626 15626 1 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK PGGSGRARTSSFAEPG PGGTGGGKASVGAMGG R T S G K A 2 0 0 0 0 0 1 18 0 0 0 1 0 1 3 4 2 0 0 0 0 0 32 0 2432.0589 P49840 P49840 19 50 GSK3A Glycogen synthase kinase-3 alpha yes yes 2;3 1.252E-06 71.425 By MS/MS By MS/MS 2 1 115830000 73662000 42164000 6778 1732 7579 17146;17147;17148 15627;15628 15628 3278;3279;6722 2 TSSFTEQLDEGTPNR TPTRMRSRTSSFTEQL LDEGTPNRESGDTQSF R T S N R E 0 1 1 1 0 1 2 1 0 0 1 0 0 1 1 2 3 0 0 0 0 0 15 0 1680.7591 Q86W71;E7EVX2;Q13439;C9J0Y3;C9JHJ5 Q86W71 39 53 GOLGA4 Golgin subfamily A member 4 yes no 2 0.0003646 101.61 By MS/MS By MS/MS 1 1 34542000 15785000 18757000 6779 744 7580 17149;17150 15629;15630 15629 1353 2 TSSGDPPSPLVK GIARTPMKTSSGDPPS DPPSPLVKQLSEVFET K T S V K Q 0 0 0 1 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 1 0 0 12 0 1183.6085 Q99618;F5GX58;F8WDL1 Q99618 80 91 CDCA3 Cell division cycle-associated protein 3 yes no 2 0.00095648 103.13 By MS/MS By MS/MS 1 1 17480000 10242000 7238100 6780 2555 7581 17151;17152 15631;15632;15633;15634;15635;15636 15632 5166 6 TSSGTSLSAMHSSGSSGK SKASSLHRTSSGTSLS HSSGSSGKGAGPLRGK R T S G K G 1 0 0 0 0 0 0 3 1 0 1 1 1 0 0 8 2 0 0 0 0 0 18 0 1667.7421 Q12888;A6NNK5;M0R142 Q12888 1315 1332 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0097913 69.111 By MS/MS By matching 1 1 23482000 9903500 13579000 6781 1882 7582 17153;17154 15637 15637 3586;6782 1 TSSKESSPIPSPTSDRK VNGATEQRTSSKESSP PSPTSDRKAKTALPAQ R T S R K A 0 1 0 1 0 0 1 0 0 1 0 2 0 0 3 6 2 0 0 0 0 0 17 2 1802.901 A0A087WUZ3;Q01082 A0A087WUZ3 2161 2177 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.0053192 58.082 By MS/MS By matching 1 1 18963000 9240100 9723000 6782 53 7583 17155;17156 15638 15638 99;100;101 1 TSSLAPVVGTTTTTPSPSAIK SRLASKTKTSSLAPVV TPSPSAIKAAAKSAAL K T S I K A 2 0 0 0 0 0 0 1 0 1 1 1 0 0 3 4 6 0 0 2 0 0 21 0 2015.0787 Q92733 Q92733 226 246 PRCC Proline-rich protein PRCC yes yes 2 2.0256E-49 156.15 By MS/MS By MS/MS 1 1 48271000 29095000 19177000 6783 2435 7584 17157;17158 15639;15640 15640 4900;4901 2 TSSLAPVVGTTTTTPSPSAIKAAAK SRLASKTKTSSLAPVV SAIKAAAKSAALQVTK K T S A K S 5 0 0 0 0 0 0 1 0 1 1 2 0 0 3 4 6 0 0 2 0 0 25 1 2356.285 Q92733 Q92733 226 250 PRCC Proline-rich protein PRCC yes yes 3 0.0016507 55.012 By MS/MS By MS/MS 1 1 10061000 4589500 5471200 6784 2435 7585 17159;17160 15641;15642 15641 4900;4901 2 TSSLDGAAVAVLSR GPGLPAHRTSSLDGAA AAVAVLSRTAPTGPGS R T S S R T 3 1 0 1 0 0 0 1 0 0 2 0 0 0 0 3 1 0 0 2 0 0 14 0 1345.7201 D6R9V6;A6NJ38;A6NHM7;Q7Z5H3 D6R9V6 226 239 ARHGAP22 Rho GTPase-activating protein 22 yes no 2 0.0011205 89.466 By MS/MS By MS/MS 1 1 12773000 6122000 6650600 6785 417 7586 17161;17162 15643;15644 15644 782;783 1 TSSLDTLAAPYLAGHWPR SPSSIIRRTSSLDTLA YLAGHWPRDSHGQAAP R T S P R D 3 1 0 1 0 0 0 1 1 0 3 0 0 0 2 2 2 1 1 0 0 0 18 0 1954.9901 Q6P1L5 Q6P1L5 218 235 FAM117B Protein FAM117B yes yes 3 4.4699E-06 95.57 By MS/MS By matching 1 1 6465900 4146500 2319400 6786 2152 7587 17163;17164 15645 15645 4287 1 TSSLTQFPPSQSEER CPPVKRERTSSLTQFP PPSQSEERSSGFRLKP R T S E R S 0 1 0 0 0 2 2 0 0 0 1 0 0 1 2 4 2 0 0 0 0 0 15 0 1692.7955 B7Z7F3;Q9H6Z4 B7Z7F3 56 70 RANBP3 Ran-binding protein 3 yes no 2 0.00021067 106.76 By MS/MS By MS/MS 5 5 74188000 37930000 36258000 6787 515 7588 17165;17166;17167;17168;17169;17170;17171;17172;17173;17174 15646;15647;15648;15649;15650;15651;15652 15647 954;955 6 TSSPLFNK VGSGEGPRTSSPLFNK TSSPLFNKAVFLRPSS R T S N K A 0 0 1 0 0 0 0 0 0 0 1 1 0 1 1 2 1 0 0 0 0 0 8 0 892.46543 Q9BY89 Q9BY89 126 133 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.013447 81.95 By MS/MS By matching 1 1 6903300 3710000 3193400 6788 2604 7589 17175;17176 15653 15653 5274 1 TSSPRSPPSSSEIFTPAHEENVR RVVYNGKRTSSPRSPP PAHEENVRFIYEAWQG R T S V R F 1 2 1 0 0 0 3 0 1 1 0 0 0 1 4 6 2 0 0 1 0 0 23 1 2511.199 I3L2L5;I3L317;I3L4Q0;C9JLW8;I3L3A7 I3L2L5 11 33 FAM195B Protein FAM195B yes no 3 1.2623E-09 90.964 By MS/MS By MS/MS 1 1 30949000 21977000 8972500 6789 599 7590 17177;17178 15654;15655;15656;15657 15654 1089;1090 4 TSSQYMRFLTLGR ________________ MRFLTLGRNVRRRNMS R T S G R N 0 2 0 0 0 1 0 1 0 0 2 0 1 1 0 2 2 0 1 0 0 0 13 1 1558.7926 H7BXI0 H7BXI0 3 15 CPNE9 yes yes 3 0.024506 45.357 By matching By MS/MS 1 1 4299200 2267300 2031900 6790 1149 7591 17179;17180 15658 15658 7466 0 TSSTCSNESLSVGGTSVTPR SDGEGRKRTSSTCSNE GGTSVTPRRISWRQRI R T S P R R 0 1 1 0 1 0 1 2 0 0 1 0 0 0 1 6 4 0 0 2 0 0 20 0 2025.9273 O60343;Q5JU47 O60343 749 768 TBC1D4 TBC1 domain family member 4 yes no 2;3 0.0017804 63.185 By MS/MS By MS/MS 4 3 54325000 33651000 20675000 6791 1407 7592;7593 17181;17182;17183;17184;17185;17186;17187 15659;15660;15661;15662 15661 2595;2596;2597;2598;2599;6621;6622 4 TSSTLDSEGTFNSYR DSNKNGRRTSSTLDSE EGTFNSYRKEWEELFV R T S Y R K 0 1 1 1 0 0 1 1 0 0 1 0 0 1 0 4 3 0 1 0 0 0 15 0 1663.7326 Q92609;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 42 56 TBC1D5 TBC1 domain family member 5 yes no 2 0.00053719 85.909 By matching By MS/MS 1 1 5533600 2732400 2801100 6792 2427 7594 17188;17189 15663 15663 4882 1 TSSVSNPQDSVGSPCSR PVYGSSAKTSSVSNPQ SVGSPCSRVGEEEHVY K T S S R V 0 1 1 1 1 1 0 1 0 0 0 0 0 0 2 6 1 0 0 2 0 0 17 0 1763.7744 F5GZ78;A0A1B0GTU4;P49023;F5H836;A0A1B0GU60 F5GZ78 92 108 PXN Paxillin yes no 2 0.0052915 63.436 By matching By MS/MS 1 1 26027000 16185000 9842100 6793 367 7595 17190;17191 15664 15664 686 1 TSSVSSISQVSPER QEGTLKRKTSSVSSIS ISQVSPERGMPPPSSP K T S E R G 0 1 0 0 0 1 1 0 0 1 0 0 0 0 1 6 1 0 0 2 0 0 14 0 1462.7264 P42356 P42356 255 268 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.0011708 88.73 By MS/MS 1 7289000 0 7289000 6794 1696 7596 17192 15665;15666 15666 3113 2 TSSVVTLEVAK RAAELMTRTSSVVTLE VVTLEVAKQGAIYHGL R T S A K Q 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 2 2 0 0 3 0 0 11 0 1132.634 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1040 1050 MLLT4 Afadin yes no 2 5.3607E-06 142.76 By MS/MS By MS/MS 1 1 50734000 23803000 26931000 6795 431 7597 17193;17194 15667;15668 15667 822 2 TSTDRHSLSLDDIR QTICRKPKTSTDRHSL SLSLDDIRLYQKDFLR K T S I R L 0 2 0 3 0 0 0 0 1 1 2 0 0 0 0 3 2 0 0 0 0 0 14 1 1614.7962 G3V4T7;Q96NE9 G3V4T7 459 472 FRMD6 FERM domain-containing protein 6 yes no 3 0.0020967 68.845 By MS/MS By matching 1 1 7151800 3747800 3404000 6796 976 7598 17195;17196 15669 15669 1778 1 TSTESRKSLTTQISNFDNISK EDRLTRGRTSTESRKS SNFDNISKLSEQVVLT R T S S K L 0 1 2 1 0 1 1 0 0 2 1 2 0 1 0 5 4 0 0 0 0 0 21 2 2356.187 O43614 O43614 399 419 HCRTR2 Orexin receptor type 2 yes yes 2 0.021369 51.875 By MS/MS 1 0 0 0 6797 1390 7599 17197 15670 15670 2550;2551 1 TSTFCGTPEFLAPEVLTDTSYTR EGMGYGDRTSTFCGTP LTDTSYTRAVDWWGLG R T S T R A 1 1 0 1 1 0 2 1 0 0 2 0 0 2 2 2 6 0 1 1 0 0 23 0 2592.2054 Q16512 Q16512 772 794 PKN1 Serine/threonine-protein kinase N1 yes yes 2;3 0.0011448 72.086 By MS/MS By MS/MS 2 2 36270000 24111000 12159000 6798 2015 7600 17198;17199;17200;17201 15671;15672;15673 15671 3931;6838;6839 3 TSTFCGTPEFLAPEVLTETSYTR EGMGYGDRTSTFCGTP LTETSYTRAVDWWGLG R T S T R A 1 1 0 0 1 0 3 1 0 0 2 0 0 2 2 2 6 0 1 1 0 0 23 0 2606.221 Q16513;H0Y429 Q16513 814 836 PKN2 Serine/threonine-protein kinase N2 yes no 2;3 0.00049111 67.218 By MS/MS By MS/MS 2 2 74457000 46459000 27999000 6799 2016 7601 17202;17203;17204;17205 15674;15675;15676 15674 3941;6842;6843 3 TSVLEESGPSR NLDSGEHKTSVLEESG LEESGPSRLNNNYLMS K T S S R L 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 3 1 0 0 1 0 0 11 0 1160.5673 H0Y8J2;Q03188 H0Y8J2 585 595 CENPC Centromere protein C yes no 2 0.002797 87.719 By MS/MS By matching 1 1 3486400 1786900 1699500 6800 1041 7602 17206;17207 15677 15677 1932;1933 1 TSVQTEDDQLIAGQSAR EDFDVRSRTSVQTEDD LIAGQSARAIMAQLPQ R T S A R A 2 1 0 2 0 3 1 1 0 1 1 0 0 0 0 2 2 0 0 1 0 0 17 0 1817.8755 G3XAM7;P35221;A0A0A0MTJ6;A0A0A0MRI5;P26232 G3XAM7 654 670 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 yes no 2 0.00010454 99.891 By MS/MS 1 8077300 8077300 0 6801 986 7603 17208 15678 15678 1796;1797;6491;6492 1 TSVSQNVIPSSAQK PSVLLDAKTSVSQNVI VIPSSAQKRETYTFEN K T S Q K R 1 0 1 0 0 2 0 0 0 1 0 1 0 0 1 4 1 0 0 2 0 0 14 0 1444.7522 H0Y8J2;Q03188 H0Y8J2 74 87 CENPC Centromere protein C yes no 2 0.0012446 87.647 By MS/MS By MS/MS 1 1 7781900 4619600 3162300 6802 1041 7604 17209;17210 15679;15680;15681 15680 1934;1935 3 TTAPTEGKSPLK AERDRKHRTTAPTEGK TEGKSPLKKEDRSDGS R T T L K K 1 0 0 0 0 0 1 1 0 0 1 2 0 0 2 1 3 0 0 0 0 0 12 1 1228.6663 A0A087WWP4;Q96T37 A0A087WWP4 689 700 RBM15 Putative RNA-binding protein 15 yes no 2 0.009567 71.279 By matching By MS/MS 1 1 7649100 3702200 3947000 6803 81 7605 17211;17212 15682 15682 155 1 TTDIVIRIGNTEDGAPHK DHPDFRFRTTDIVIRI TEDGAPHKEDEPSVGQ R T T H K E 1 1 1 2 0 0 1 2 1 3 0 1 0 0 1 0 3 0 0 1 0 0 18 1 1936.0014 Q9C0C9;K7ES11 Q9C0C9 655 672 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 2 0.011223 61.684 By MS/MS By matching 1 1 4937600 3124600 1813000 6804 2617 7606 17213;17214 15683 15683 1 TTESGSDSESKPDQEAEPQEAAGAQGR ________________ EAAGAQGRAGAPVPEP M T T G R A 4 1 0 2 0 3 5 3 0 0 0 1 0 0 2 4 2 0 0 0 0 0 27 1 2761.1911 A0A0A0MRA8;A0A0A0MSA4;J3KS70;J3QKY2;J3KRD1;J3QKK4;J3QR33;J3QS55;J3QRQ6;Q9Y2J2 A0A0A0MRA8 2 28 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 3 0.00018139 62.678 By MS/MS By MS/MS 1 1 30546000 14610000 15936000 6805 175;2891 7607 17215;17216 15684;15685 15685 312 2 TTGDISVEKLNLGTDSDSSPQK ASPGSEARTTGDISVE DSDSSPQKSSRDPPSS R T T Q K S 0 0 1 3 0 1 1 2 0 1 2 2 0 0 1 4 3 0 0 1 0 0 22 1 2291.1129 Q16512;K7EN76 Q16512 544 565 PKN1 Serine/threonine-protein kinase N1 yes no 3 0.00038964 67.866 By MS/MS By MS/MS 1 1 13419000 6254400 7164700 6806 2015 7608 17217;17218 15686;15687 15686 3928;3929 2 TTHLAGALSPGEAWPFESV EVELNSPRTTHLAGAL EAWPFESV________ R T T S V - 3 0 0 0 0 0 2 2 1 0 2 0 0 1 2 2 2 1 0 1 0 0 19 0 1968.9581 Q9Y3X0 Q9Y3X0 513 531 CCDC9 Coiled-coil domain-containing protein 9 yes yes 2 2.2034E-07 109.79 By MS/MS By MS/MS 1 1 9282200 5899200 3383000 6807 2913 7609 17219;17220 15688;15689 15688 6061 2 TTIFSPEGR MSRRYDSRTTIFSPEG TIFSPEGRLYQVEYAM R T T G R L 0 1 0 0 0 0 1 1 0 1 0 0 0 1 1 1 2 0 0 0 0 0 9 0 1006.5084 H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YL69;P25789 H0YLS6 9 17 PSMA4 Proteasome subunit alpha type;Proteasome subunit alpha type-4 yes no 2 0.0095444 74.962 By MS/MS By MS/MS 1 1 14346000 9191000 5155400 6808 1090 7610 17221;17222 15690;15691 15691 2006 2 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR AQRSTVFKTTIPEEEE FHQQGTPRASNRSCAI K T T P R A 2 1 0 0 0 2 11 2 1 1 1 0 0 1 2 0 3 0 0 3 0 0 30 0 3410.5638 P20700 P20700 548 577 LMNB1 Lamin-B1 yes yes 3 0.016214 45.43 By MS/MS 1 57092000 57092000 0 6809 1612 7611 17223 15692 15692 1 TTKSPSDSGYSYETIGK YYYEKIERTTKSPSDS YSYETIGKTTKTPEDG R T T G K T 0 0 0 1 0 0 1 2 0 1 0 2 0 0 1 4 3 0 2 0 0 0 17 1 1819.8476 P46821 P46821 1912 1928 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 3.8726E-05 95.018 By MS/MS By MS/MS 2 2 16544000 9001000 7542900 6810 1712 7612;7613 17224;17225;17226;17227 15693;15694;15695 15695 3180;3181;3182;7612;7613 3 TTKTPEDGDYSYEIIEK YSYETIGKTTKTPEDG YSYEIIEKTTRTPEEG K T T E K T 0 0 0 2 0 0 3 1 0 2 0 2 0 0 1 1 3 0 2 0 0 0 17 1 1987.9262 P46821 P46821 1929 1945 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 4.3704E-86 203.92 By MS/MS By MS/MS 3 3 77866000 48289000 29576000 6811 1712 7614;7615 17228;17229;17230;17231;17232;17233 15696;15697;15698;15699;15700;15701 15697 3185;7617;7618 6 TTLYSGTGLSVNR WAEEPTNRTTLYSGTG GTGLSVNRENAKCFTT R T T N R E 0 1 1 0 0 0 0 2 0 0 2 0 0 0 0 2 3 0 1 1 0 0 13 0 1367.7045 J3KP75;O75167 J3KP75 371 383 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 yes no 2 0.018754 54.486 By MS/MS 1 1069500 1069500 0 6812 1230 7616 17234 15702 15702 7476 0 TTNFAGILSQGLR RLLWHGSRTTNFAGIL GILSQGLRIAPPEAPV R T T L R I 1 1 1 0 0 1 0 2 0 1 2 0 0 1 0 1 2 0 0 0 0 0 13 0 1376.7412 P09874 P09874 866 878 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0037789 87.184 By matching By MS/MS 1 1 2081700 1042900 1038700 6813 1550 7617 17235;17236 15703 15703 1 TTNSSLEEIMDK SKDQGLQKTTNSSLEE SLEEIMDKAYDKFDVE K T T D K A 0 0 1 1 0 0 2 0 0 1 1 1 1 0 0 2 2 0 0 0 0 0 12 0 1366.6286 Q709C8 Q709C8 733 744 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 2 0.00014162 113.99 By MS/MS By MS/MS 1 1 6401000 2946500 3454500 6814 2189 7618 17237;17238 15704;15705 15705 4362;4363 2 TTNVLGAVNKPLSSAGK FFTPGKPKTTNVLGAV KPLSSAGKQSQTKSSR K T T G K Q 2 0 2 0 0 0 0 2 0 0 2 2 0 0 1 2 2 0 0 2 0 0 17 1 1655.9206 Q9NTI5;A9IYQ1 Q9NTI5 1127 1143 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 0.0025679 63.225 By MS/MS By MS/MS 1 1 4077100 2844300 1232800 6815 2731 7619 17239;17240 15706;15707 15707 5593;5594 2 TTPSVVAFTADGER LENAEGARTTPSVVAF AFTADGERLVGMPAKR R T T E R L 2 1 0 1 0 0 1 1 0 0 0 0 0 1 1 1 3 0 0 2 0 0 14 0 1449.71 P38646;D6RA73;D6RJI2 P38646 86 99 HSPA9 Stress-70 protein, mitochondrial yes no 2 0.005445 75.695 By MS/MS By MS/MS 1 1 4104700 1952800 2152000 6816 1680 7620 17241;17242 15708;15709 15708 2 TTPSYVAFTDTER IANDQGNRTTPSYVAF VAFTDTERLIGDAAKN R T T E R L 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 1 4 0 1 1 0 0 13 0 1486.694 P17066;P48741;P11142;E9PKE3;E9PNE6;P54652;E9PQQ4;E9PQK7;E9PLF4;E9PI65;E9PPY6;E9PN25;A0A0G2JIW1;P0DMV9;P0DMV8;Q53FA3;P34931;E9PK54 P11142 37 49 HSPA6;HSPA7;HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like no no 2 0.0074872 77.062 By MS/MS By matching 1 1 31234000 16205000 15029000 6817 1560;320;812;1590 7621 17243;17244 15710 15710 1 TTQSMQDFPVVDSEEEAEEEFQK VGAYGSERTTQSMQDF EAEEEFQKELSQWRKD R T T Q K E 1 0 0 2 0 3 6 0 0 0 0 1 1 2 1 2 2 0 0 2 0 0 23 0 2702.1541 Q9UBB9 Q9UBB9 198 220 TFIP11 Tuftelin-interacting protein 11 yes yes 2;3 0.0014235 57.227 By MS/MS By MS/MS 3 3 102020000 53859000 48160000 6818 2799 7622;7623 17245;17246;17247;17248;17249;17250 15711;15712;15713;15714 15713 5741 4 TTRTPEEGGYSYDISEK YSYEIIEKTTRTPEEG YSYDISEKTTSPPEVS K T T E K T 0 1 0 1 0 0 3 2 0 1 0 1 0 0 1 2 3 0 2 0 0 0 17 1 1931.8749 P46821 P46821 1946 1962 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.0050095 58.427 By MS/MS By matching 1 1 7464900 3907500 3557500 6819 1712 7624 17251;17252 15715 15715 3186;6707;7619;7620 1 TTSAGTGGMWR CGTRSAGRTTSAGTGG AGTGGMWRFYTEDSPG R T T W R F 1 1 0 0 0 0 0 3 0 0 0 0 1 0 0 1 3 1 0 0 0 0 11 0 1123.508 P60468 P60468 47 57 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.0010501 102.05 By MS/MS By MS/MS 1 1 41754000 23547000 18207000 6820 1783 7625 17253;17254 15716;15717 15716 3362 2 TTSFAESCKPVQQPSAFGSMK ________________ PSAFGSMKVSRDKDGS R T T M K V 2 0 0 0 1 2 1 1 0 0 0 2 1 2 2 4 2 0 0 1 0 0 21 1 2287.0613 P49841 P49841 7 27 GSK3B Glycogen synthase kinase-3 beta yes yes 2;3 7.6277E-19 122.44 By MS/MS By MS/MS 3 3 152100000 82396000 69699000 6821 1733 7626;7627 17255;17256;17257;17258;17259;17260 15718;15719;15720;15721;15722;15723 15722 216 3281;6723;6724 6 TTSFAESCKPVQQPSAFGSMKVSR ________________ FGSMKVSRDKDGSKVT R T T S R D 2 1 0 0 1 2 1 1 0 0 0 2 1 2 2 5 2 0 0 2 0 0 24 2 2629.2629 P49841 P49841 7 30 GSK3B Glycogen synthase kinase-3 beta yes yes 3 0.0026892 63.893 By MS/MS By MS/MS 2 2 36610000 19024000 17586000 6822 1733 7628;7629 17261;17262;17263;17264 15724;15725;15726 15725 216 3281;6723;6724 3 TTSGDDACNLTSFR VGRRSLERTTSGDDAC ACNLTSFRPATLTVTN R T T F R P 1 1 1 2 1 0 0 1 0 0 1 0 0 1 0 2 3 0 0 0 0 0 14 0 1543.6573 Q96N67;A0A1B0GUE9;A0A0U1RQT6 Q96N67 450 463 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.022701 55.885 By matching By MS/MS 1 1 4207800 2212700 1995100 6823 2519 7630 17265;17266 15727 15727 1 TTSISPALAR IPPKVPQRTTSISPAL SISPALARKNSPGNGS R T T A R K 2 1 0 0 0 0 0 0 0 1 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1015.5662 Q9UKE5 Q9UKE5 676 685 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.0012506 95.477 By MS/MS By MS/MS 2 2 102140000 54013000 48128000 6824 2828 7631;7632 17267;17268;17269;17270 15728;15729;15730;15731 15729 5824;5825 4 TTSMTRQQNFK KQRRSIVRTTSMTRQQ MTRQQNFKQKVVALLR R T T F K Q 0 1 1 0 0 2 0 0 0 0 0 1 1 1 0 1 3 0 0 0 0 0 11 1 1340.6507 F8VW41;Q86VP3 F8VW41 212 222 PACS2 Phosphofurin acidic cluster sorting protein 2 yes no 2 0.016093 50.484 By MS/MS 1 0 0 0 6825 921 7633 17271 15732 15732 105 1 TTSPLEEEEREIK QQQEKEMKTTSPLEEE EEEEREIKSSQGLKEK K T T I K S 0 1 0 0 0 0 5 0 0 1 1 1 0 0 1 1 2 0 0 0 0 0 13 1 1559.7679 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 305 317 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 0.0019611 75.788 By MS/MS By MS/MS 2 3 10120000 6756400 3364100 6826 725 7634 17272;17273;17274;17275;17276 15733;15734;15735 15734 1299 3 TTSPPEVSGYSYEKTER YSYDISEKTTSPPEVS YSYEKTERSRRLLDDI K T T E R S 0 1 0 0 0 0 3 1 0 0 0 1 0 0 2 3 3 0 2 1 0 0 17 1 1929.8956 P46821 P46821 1963 1979 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.00079843 71.98 By MS/MS By MS/MS 1 1 11385000 6461200 4923600 6827 1712 7635 17277;17278 15736;15737 15736 3188;6708 2 TTSPPLSIPTTHLIHQPAGSR TSLKTVSRTTSPPLSI IHQPAGSRSLEPSGIL R T T S R S 1 1 0 0 0 1 0 1 2 2 2 0 0 0 4 3 4 0 0 0 0 0 21 0 2210.1808 Q5T5U3;E7ESW5;F8W9U9;A0A1B0GV73;A0A087WW76 Q5T5U3 316 336 ARHGAP21 Rho GTPase-activating protein 21 yes no 3 0.0035576 58.952 By MS/MS 1 3742600 0 3742600 6828 2098 7636 17279 15738 15738 6881;6882 1 TTSPSSDTDLLDR LVDKSGKRTTSPSSDT SDTDLLDRSASKTELK R T T D R S 0 1 0 3 0 0 0 0 0 0 2 0 0 0 1 3 3 0 0 0 0 0 13 0 1406.6525 C9J9G2;Q96QT6;K7ENU0;K7ERZ4;K7EJ43 C9J9G2 129 141 PHF12 PHD finger protein 12 yes no 2 0.0023726 83.877 By MS/MS By MS/MS 2 2 15878000 7438300 8439200 6829 573 7637;7638 17280;17281;17282;17283 15739;15740;15741 15739 1051;1052;6374 2 TTSQCKSEPPLLR TGRSPRKRTTSQCKSE KSEPPLLRTSKRTIYT R T T L R T 0 1 0 0 1 1 1 0 0 0 2 1 0 0 2 2 2 0 0 0 0 0 13 1 1515.7715 Q9NWZ5 Q9NWZ5 61 73 UCKL1 Uridine-cytidine kinase-like 1 yes yes 2;3 0.0017069 101.43 By MS/MS By MS/MS 2 2 34347000 18751000 15596000 6830 2748 7639 17284;17285;17286;17287 15742;15743;15744;15745 15742 5624;7072 4 TTSRSPVLSR RAREVPVRTTSRSPVL SRSPVLSRRDSPLQGS R T T S R R 0 2 0 0 0 0 0 0 0 0 1 0 0 0 1 3 2 0 0 1 0 0 10 1 1102.6095 C9J840;E7EX83;A0A0D9SG62;H7C0P6;E7ENQ1;G3XAA2;H7C360;G5E948;E7EN19;A0A0D9SEY1;O95819;H7C3Z6 C9J840 371 380 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 3 0.0199 54.486 By MS/MS By matching 2 1 7521100 4776300 2744700 6831 310 7640 17288;17289;17290 15746;15747 15747 562 2 TTSSANNPNLMYQDECDRR GGGRSRYRTTSSANNP YQDECDRRLRGVKDGG R T T R R L 1 2 3 2 1 1 1 0 0 0 1 0 1 0 1 2 2 0 1 0 0 0 19 1 2270.9644 Q92841 Q92841 569 587 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 3 0.0044468 51.888 By MS/MS By matching 1 1 15864000 14723000 1141600 6832 2441 7641 17291;17292 15748 15748 4916 1 TTTAAAVASTGPSSRSPSTLLPK KSTQTVAKTTTAAAVA SPSTLLPKKPTAIKTE K T T P K K 4 1 0 0 0 0 0 1 0 0 2 1 0 0 3 5 5 0 0 1 0 0 23 1 2200.1699 E7EVA0;P27816;H0Y2V1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 1955 1977 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 5.5792E-06 79.676 By MS/MS By MS/MS 1 1 49438000 28455000 20984000 6833 742 7642 17293;17294 15749;15750;15751;15752;15753 15749 1349;1350;1351;6431 5 TTTPGPSLSQGVSVDEK GHPSTGLKTTTPGPSL QGVSVDEKLMPSAPVN K T T E K L 0 0 0 1 0 1 1 2 0 0 1 1 0 0 2 3 3 0 0 2 0 0 17 0 1701.8421 A0A0C4DG07;O60934 A0A0C4DG07 253 269 NBN Nibrin yes no 2 0.0051449 63.681 By matching By MS/MS 1 1 9042400 4602600 4439800 6834 273 7643 17295;17296 15754 15754 492 1 TTWGDGGENSPCNVVSK FESGKAYKTTWGDGGE SPCNVVSKQPGPVTNG K T T S K Q 0 0 2 1 1 0 1 3 0 0 0 1 0 0 1 2 2 1 0 2 0 0 17 0 1806.7843 H3BM38;H3BV99;H3BP15;H3BQY9;O00161 H3BM38 101 117 SNAP23 Synaptosomal-associated protein;Synaptosomal-associated protein 23 yes no 2 0.00035237 79.88 By MS/MS By matching 1 1 28276000 16144000 12132000 6835 1111 7644 17297;17298 15755 15755 2038 1 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRK QSRAIPTRTVAISDAA TRIIYDRKFLLDRRNS R T V R K F 3 2 0 3 1 1 0 4 1 3 2 1 0 1 3 2 7 0 2 1 0 0 37 2 3979.9738 Q13542 Q13542 21 57 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 yes yes 4 0.0021345 44.317 By MS/MS By MS/MS 1 1 84834000 42997000 41838000 6836 1923 7645 17299;17300 15756;15757 15757 3710;3711;6803;6804;6805;7691 2 TVANLLSGKSPR MPHPATGKTVANLLSG LLSGKSPRKSAEPSAN K T V P R K 1 1 1 0 0 0 0 1 0 0 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1241.7092 Q13428;J3KQ96;E7ETY2 Q13428 147 158 TCOF1 Treacle protein yes no 2;3 1.06E-08 139.34 By MS/MS By MS/MS 2 2 630540000 392540000 238000000 6837 1915 7646 17301;17302;17303;17304 15758;15759;15760;15761 15760 3689;3690 4 TVDLDPGTLYVHSV PSRKSRAKTVDLDPGT GTLYVHSV________ K T V S V - 0 0 0 2 0 0 0 1 1 0 2 0 0 0 1 1 2 0 1 3 0 0 14 0 1514.7617 Q8WY07 Q8WY07 606 619 SLC7A3 Cationic amino acid transporter 3 yes yes 2;3 4.5613E-08 126.31 By MS/MS By MS/MS 1 2 114520000 58510000 56011000 6838 2415 7647 17305;17306;17307 15762;15763;15764 15763 4845;7822 3 TVDLGISDLEDDC TTGKRTIKTVDLGISD ISDLEDDC________ K T V D C - 0 0 0 4 1 0 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 13 0 1450.6134 F5H5U2;Q8NHQ9 F5H5U2 557 569 DDX55 ATP-dependent RNA helicase DDX55 yes no 2 0 294.49 By MS/MS By MS/MS 1 1 197950000 103930000 94016000 6839 890 7648 17308;17309 15765;15766 15766 1598 2 TVDNFVALATGEK LFGKTVPKTVDNFVAL VALATGEKGFGYKNSK K T V E K G 2 0 1 1 0 0 1 1 0 0 1 1 0 1 0 0 2 0 0 2 0 0 13 0 1363.6983 P23284 P23284 72 84 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 0.0030192 90.913 By MS/MS By MS/MS 1 1 5157700 2174400 2983400 6840 1621 7649 17310;17311 15767;15768 15767 2 TVDSQGPTPVCTPTFLER GTLDTPEKTVDSQGPT CTPTFLERRKSQVAEL K T V E R R 0 1 0 1 1 1 1 1 0 0 1 0 0 1 3 1 4 0 0 2 0 0 18 0 2003.9622 H7BZL0;C9J808;Q9BYG3 H7BZL0 36 53 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 2 0.0070128 71.548 By MS/MS By MS/MS 1 1 10262000 5802500 4459600 6841 566 7650 17312;17313 15769;15770 15769 6371 2 TVEDEDQDSEEEKDNDSYIKER VNDKNLKKTVEDEDQD NDSYIKERSDIPSGTS K T V E R S 0 1 1 5 0 1 6 0 0 1 0 2 0 0 0 2 1 0 1 1 0 0 22 2 2672.1209 Q9Y5T5 Q9Y5T5 407 428 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 3;4 0.0058665 53.254 By MS/MS By MS/MS 2 2 66967000 34655000 32312000 6842 2936 7651 17314;17315;17316;17317 15771;15772 15772 6101 2 TVETRDGQVINETSQHHDDLE SKRTLLIKTVETRDGQ SQHHDDLE________ K T V L E - 0 1 1 3 0 2 3 1 2 1 1 0 0 0 0 1 3 0 0 2 0 0 21 1 2422.0997 P08670 P08670 446 466 VIM Vimentin yes yes 3 0.00016592 74.876 By matching By MS/MS 1 1 21081000 10442000 10638000 6843 1546 7652 17318;17319 15773 15773 2842;6662 1 TVEVAEGEAVRTPQSVTAK EKPKPNGRTVEVAEGE TPQSVTAKQPPEIDKK R T V A K Q 3 1 0 0 0 1 3 1 0 0 0 1 0 0 1 1 3 0 0 4 0 0 19 1 1971.0273 E5RJU9;Q86UE4;H0YB56 E5RJU9 109 127 MTDH Protein LYRIC yes no 3 0.0036675 59.579 By MS/MS 1 15022000 15022000 0 6844 701 7653 17320 15774 15774 6409 1 TVFPGAVPVLPASPPPK IPPSKRKKTVFPGAVP LPASPPPKDSLRSTPS K T V P K D 2 0 0 0 0 0 0 1 0 0 1 1 0 1 6 1 1 0 0 3 0 0 17 0 1672.9552 M0R165;Q9UBC2;M0R2S2 M0R165 217 233 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 2 0.0004487 78.234 By MS/MS By MS/MS 1 1 5833300 3530300 2303000 6845 1319 7654 17321;17322 15775;15776 15775 2374 2 TVFPGAVPVLPASPPPKDSLR IPPSKRKKTVFPGAVP PPPKDSLRSTPSHGSV K T V L R S 2 1 0 1 0 0 0 1 0 0 2 1 0 1 6 2 1 0 0 3 0 0 21 1 2144.1994 M0R165;Q9UBC2;M0R2S2 M0R165 217 237 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 2;3 1.0939E-13 113.6 By MS/MS By MS/MS 2 2 51004000 27519000 23485000 6846 1319 7655 17323;17324;17325;17326 15777;15778;15779;15780;15781;15782 15778 2374 6 TVFSPTLPAAR NDQGARRKTVFSPTLP SPTLPAARSSLGSLQT K T V A R S 2 1 0 0 0 0 0 0 0 0 1 0 0 1 2 1 2 0 0 1 0 0 11 0 1158.6397 C9J6P4;Q7Z2W4 C9J6P4 375 385 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.019947 62.694 By MS/MS By matching 1 1 39962000 21711000 18251000 6847 565 7656 17327;17328 15783 15783 1040 1 TVGTPIASVPGSTNTGTVPGSEKDSDSMETEEK SSVIQNLRTVGTPIAS DSMETEEKTSSAFVGK R T V E K T 1 0 1 2 0 0 4 4 0 1 0 2 1 0 3 5 6 0 0 3 0 0 33 1 3307.5249 A0A087WW66;Q99460;H7BZR6 A0A087WW66 270 302 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 3 0.00955 44.061 By MS/MS By matching 1 1 38105000 21695000 16410000 6848 72 7657 17329;17330 15784 15784 6234 1 TVHDMEQFGQQQYDIYER HLGPSLQRTVHDMEQF QQYDIYERMVPPRPDS R T V E R M 0 1 0 2 0 4 2 1 1 1 0 0 1 1 0 0 1 0 2 1 0 0 18 0 2286.0011 A0A0D9SF60;Q99569 Q99569 357 374 PKP4 Plakophilin-4 no no 2;3 0.0016165 60.09 By MS/MS By MS/MS 4 3 41943000 26031000 15911000 6849 314;2552 7658;7659 17331;17332;17333;17334;17335;17336;17337 15785;15786;15787;15788;15789;15790 15785 7237;7238 6 TVHRSPLLLGAQR VPTASDSRTVHRSPLL PLLLGAQRRAVANGGT R T V Q R R 1 2 0 0 0 1 0 1 1 0 3 0 0 0 1 1 1 0 0 1 0 0 13 1 1446.8419 Q96DR7 Q96DR7 76 88 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 3 0.0017976 77.24 By MS/MS By MS/MS 1 1 5627000 2853900 2773000 6850 2474 7660 17338;17339 15791;15792 15792 4985 2 TVIIEQSWGSPK VTMGPKGRTVIIEQSW EQSWGSPKVTKDGVTV R T V P K V 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 2 1 1 0 1 0 0 12 0 1343.7085 P10809;E7EXB4;E7ESH4;C9JL25;C9JL19;C9JCQ4 P10809 61 72 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2 1.9108E-27 178.67 By MS/MS By MS/MS 2 2 64577000 38473000 26104000 6851 1557 7661;7662 17340;17341;17342;17343 15793;15794;15795;15796 15796 2860;2861 4 TVIIEQSWGSPKVTK VTMGPKGRTVIIEQSW WGSPKVTKDGVTVAKS R T V T K D 0 0 0 0 0 1 1 1 0 2 0 2 0 0 1 2 2 1 0 2 0 0 15 1 1671.9196 P10809;E7EXB4;E7ESH4;C9JL25;C9JL19;C9JCQ4 P10809 61 75 HSPD1 60 kDa heat shock protein, mitochondrial yes no 3 0.0086032 56.036 By MS/MS 1 1014600 0 1014600 6852 1557 7663 17344 15797 15797 2860;2861 1 TVIRLPSGSGAASPTGSAVDIR DVETQSGKTVIRLPSG TGSAVDIRAGAISASG K T V I R A 3 2 0 1 0 0 0 3 0 2 1 0 0 0 2 4 2 0 0 2 0 0 22 1 2111.1335 Q09666 Q09666 204 225 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 3 3.065E-06 83.411 By MS/MS By MS/MS 1 1 16146000 9771800 6373800 6853 1871 7664 17345;17346 15798;15799 15799 3542;3543 1 TVKQEQINTEPLEDTVLSPTK ETFEPEDKTVKQEQIN DTVLSPTKKRKRQKGT K T V T K K 0 0 1 1 0 2 3 0 0 1 2 2 0 0 2 1 4 0 0 2 0 0 21 1 2369.2326 O15446 O15446 268 288 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 3 5.7826E-09 95.622 By MS/MS By MS/MS 1 1 19853000 11841000 8011900 6854 1368 7665 17347;17348 15800;15801 15800 2502;6606;6607 2 TVLDPVTGDLSDTR LQNGVLLRTVLDPVTG TGDLSDTRTRYLGSRP R T V T R T 0 1 0 3 0 0 0 1 0 0 2 0 0 0 1 1 3 0 0 2 0 0 14 0 1487.7468 Q15393 Q15393 677 690 SF3B3 Splicing factor 3B subunit 3 yes yes 2 0.0014318 98.353 By MS/MS 1 1535200 0 1535200 6855 1988 7666 17349 15802 15802 1 TVLIMELINNVAK FGGAGVGKTVLIMELI ELINNVAKAHGGYSVF K T V A K A 1 0 2 0 0 0 1 0 0 2 2 1 1 0 0 0 1 0 0 2 0 0 13 0 1456.8323 P06576;H0YH81;F8W079;H0YI37;F8W0P7 P06576 213 225 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 0.0071009 76.143 By MS/MS By matching 1 1 2165200 1078500 1086700 6856 1531 7667 17350;17351 15803 15803 1 TVLSLFDEEEDKMEDQNIIQAPQK KGTKPRTKTVLSLFDE NIIQAPQKEVGKGRDP K T V Q K E 1 0 1 3 0 3 4 0 0 2 2 2 1 1 1 1 1 0 0 1 0 0 24 1 2819.3535 A0A0A0MR88;A0A096LPC5;J3KP36;Q9Y4E1;B1AP61;F8W7U3;E7ESD2;Q641Q2;A0A087WYF6 F8W7U3 711 734 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A no no 3 0.010298 46.578 By MS/MS 1 6573300 6573300 0 6857 729;158 7668 17352 15804 15804 286 1 TVLSNNLSPFAMDKK LGLQIQTKTVLSNNLS SPFAMDKKAVPGGGMP K T V K K A 1 0 2 1 0 0 0 0 0 0 2 2 1 1 1 2 1 0 0 1 0 0 15 1 1663.8603 Q09472 Q09472 278 292 EP300 Histone acetyltransferase p300 yes yes 2 0.00078174 99.747 By MS/MS By MS/MS 1 1 7386700 3947300 3439400 6858 1870 7669 17353;17354 15805;15806 15805 3528 2 TVNESASLR AETRVAVKTVNESASL VNESASLRERIEFLNE K T V L R E 1 1 1 0 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 9 0 975.49852 P06213 P06213 1058 1066 INSR Insulin receptor;Insulin receptor subunit alpha;Insulin receptor subunit beta yes yes 2 0.028487 69.672 By MS/MS 1 0 0 0 6859 1528 7670 17355 15807 15807 1 TVPSTPTLVVPHRTDGFAEAIHSPQVAGVPR HFFDDEDRTVPSTPTL PQVAGVPRFRFGPPED R T V P R F 3 2 0 1 0 1 1 2 2 1 1 0 0 1 5 2 4 0 0 5 0 0 31 1 3235.7102 P12270 P12270 2133 2163 TPR Nucleoprotein TPR yes yes 4 0.00794 41.214 By MS/MS By matching 1 1 10943000 4665800 6277400 6860 1570 7671 17356;17357 15808 15808 2886;6670 1 TVQNNKHYTCTESQSCKIDK SCKGFFKRTVQNNKHY SQSCKIDKTQRKRCPF R T V D K T 0 0 2 1 2 2 1 0 1 1 0 3 0 0 0 2 3 0 1 1 0 0 20 2 2440.1111 Q5T6F6;F1DAM0;Q13285 Q5T6F6 40 59 NR5A1 Steroidogenic factor 1 yes no 3 0.012037 42.78 By matching By MS/MS 1 1 14368000 7839300 6528900 6861 844 7672 17358;17359 15809;15810 15809 7395 2 TVQPVAMGPDGLPVDASSVSNNYIQTLGR VVKTVTTRTVQPVAMG NYIQTLGRDFRKNGNG R T V G R D 2 1 2 2 0 2 0 3 0 1 2 0 1 0 3 3 2 0 1 4 0 0 29 0 2985.4866 C9JZR2;O60716;E9PRE2;E9PKL1 C9JZR2 152 180 CTNND1 Catenin delta-1 yes no 3 7.0832E-05 64.574 By MS/MS By MS/MS 2 1 50746000 41472000 9274400 6862 624 7673;7674 17360;17361;17362 15811;15812 15811 67 1138;7338 2 TVSASSTGDLPK SPSHDRSRTVSASSTG SSTGDLPKAKTRAADL R T V P K A 1 0 0 1 0 0 0 1 0 0 1 1 0 0 1 3 2 0 0 1 0 0 12 0 1161.5877 H7C5L6;P78362 H7C5L6 99 110 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 2 4.4214E-09 132.59 By MS/MS By MS/MS 2 3 59504000 34525000 24979000 6863 1190 7675;7676 17363;17364;17365;17366;17367 15813;15814;15815;15816;15817 15816 2155;2156;2157;6552 5 TVSDNSLSNSR DYTQPMKRTVSDNSLS DNSLSNSRGEGKPDLK R T V S R G 0 1 2 1 0 0 0 0 0 0 1 0 0 0 0 4 1 0 0 1 0 0 11 0 1178.5527 B7ZL14;H0Y7W6;Q96RU3 B7ZL14 294 304 FNBP1 Formin-binding protein 1 yes no 2 0.0004153 109.15 By MS/MS By MS/MS 2 2 25350000 12837000 12513000 6864 526 7677 17368;17369;17370;17371 15818;15819;15820;15821 15819 966 4 TVSDNSLSNSRGEGKPDLK DYTQPMKRTVSDNSLS GEGKPDLKFGGKSKGK R T V L K F 0 1 2 2 0 0 1 2 0 0 2 2 0 0 1 4 1 0 0 1 0 0 19 2 2002.992 B7ZL14;H0Y7W6;Q96RU3 B7ZL14 294 312 FNBP1 Formin-binding protein 1 yes no 3 0.014623 49.535 By MS/MS By matching 2 2 70468000 36113000 34355000 6865 526 7678;7679 17372;17373;17374;17375 15822;15823 15822 966 2 TVSEPSLSGLLQIK LQNGGIKRTVSEPSLS LSGLLQIKKLKQDQKA R T V I K K 0 0 0 0 0 1 1 1 0 1 3 1 0 0 1 3 1 0 0 1 0 0 14 0 1470.8294 E7EPB1;E7EQS8;Q6N021;D6RE87 E7EPB1 97 110 TET2 Methylcytosine dioxygenase TET2 yes no 2 0.0044183 88.087 By MS/MS 1 0 0 0 6866 711 7680 17376 15824 15824 1261 1 TVSFEALPIMR NRYTNTSKTVSFEALP FEALPIMRNEPSSYCS K T V M R N 1 1 0 0 0 0 1 0 0 1 1 0 1 1 1 1 1 0 0 1 0 0 11 0 1262.6693 O15084 O15084 1009 1019 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 8.5406E-06 137.01 By MS/MS By MS/MS 2 2 28290000 16133000 12157000 6867 1356 7681;7682 17377;17378;17379;17380 15825;15826 15826 163 2473 2 TVSFSSMPTEK KQKRERKKTVSFSSMP FSSMPTEKKISSASDC K T V E K K 0 0 0 0 0 0 1 0 0 0 0 1 1 1 1 3 2 0 0 1 0 0 11 0 1212.5696 Q9UPR0 Q9UPR0 121 131 PLCL2 Inactive phospholipase C-like protein 2 yes yes 2 0.016362 74.237 By MS/MS 1 0 0 0 6868 2869 7683 17381 15827 15827 5917 1 TVSGPGTPEPRPATPGASSVEQLR ________________ ASSVEQLRKEGNELFK M T V L R K 2 2 0 0 0 1 2 3 0 0 1 0 0 0 5 3 3 0 0 2 0 0 24 1 2390.219 Q9H3U1 Q9H3U1 2 25 UNC45A Protein unc-45 homolog A yes yes 3 0.011239 47.155 By matching By MS/MS 1 1 13901000 8188500 5712000 6869 2655 7684 17382;17383 15828 15828 7051 1 TVSLPLSSPNIK NSLSTSYKTVSLPLSS PLSSPNIKLNLTSPKR K T V I K L 0 0 1 0 0 0 0 0 0 1 2 1 0 0 2 3 1 0 0 1 0 0 12 0 1254.7184 A0A0A0MQZ8;H0Y7Y3;H0Y785;H0Y472;H0Y4P6;Q8IWZ3 A0A0A0MQZ8 46 57 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes no 2 6.5696E-14 158.34 By MS/MS By MS/MS 1 1 4260400 2535800 1724600 6870 166 7685 17384;17385 15829;15830 15829 297 2 TVSLPLSSPNIKLNLTSPK NSLSTSYKTVSLPLSS KLNLTSPKRGQKREEG K T V P K R 0 0 2 0 0 0 0 0 0 1 4 2 0 0 3 4 2 0 0 1 0 0 19 1 2008.1568 A0A0A0MQZ8;H0Y7Y3;H0Y785;H0Y472;H0Y4P6;Q8IWZ3 A0A0A0MQZ8 46 64 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes no 3 0.0036675 59.579 By MS/MS By MS/MS 1 1 4558700 3086400 1472300 6871 166 7686 17386;17387 15831;15832 15832 296;297;6265 2 TVSLTPSPTTQVETPDLVDHDNTSPLFR DINYQTRKTVSLTPSP DNTSPLFRTPLSFTNP K T V F R T 0 1 1 3 0 1 1 0 1 0 3 0 0 1 4 3 6 0 0 3 0 0 28 0 3066.5146 Q05209;H3BM04 Q05209 565 592 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes no 3 1.7852E-05 69.72 By MS/MS By matching 1 1 24824000 14996000 9828200 6872 1852 7687 17388;17389 15833 15833 6769 1 TVSPPIR STSVKSPKTVSPPIRK KTVSPPIRKGWSMSEQ K T V I R K 0 1 0 0 0 0 0 0 0 1 0 0 0 0 2 1 1 0 0 1 0 0 7 0 768.44939 F8VS07;F8VQE1;Q9UHB6 F8VS07 304 310 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.022 85.862 By MS/MS 1 7439400 0 7439400 6873 911 7688 17390 15834;15835 15835 2 TVSPPTVCTIPTVVGR AKVDSTVKTVSPPTVC TIPTVVGRNVIPRITT K T V G R N 0 1 0 0 1 0 0 1 0 1 0 0 0 0 3 1 4 0 0 4 0 0 16 0 1682.9025 Q9BWT3;A0A0C4DH56 Q9BWT3 597 612 PAPOLG Poly(A) polymerase gamma yes no 2 0.02659 50.608 By MS/MS By matching 1 1 5267800 3410200 1857500 6874 2593 7689 17391;17392 15836 15836 1 TVSPSTIR QEQKGQPRTVSPSTIR TVSPSTIRDGPSSAPA R T V I R D 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 2 2 0 0 1 0 0 8 0 859.47633 Q96JH7 Q96JH7 745 752 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 0.023059 69.275 By MS/MS By MS/MS 1 1 7615400 3867700 3747700 6875 2507 7690 17393;17394 15837;15838 15838 2 TVSSPPTSPR SSELDASKTVSSPPTS SSPPTSPRPGSAATVS K T V P R P 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 1 0 0 10 0 1027.5298 O76094 O76094 618 627 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.024522 61.435 By MS/MS 1 45767000 0 45767000 6876 1457 7691 17395 15839 15839 2693;2694;2695;6642 1 TVSSPPTSPRPGSAATVSASTSNIIPPR SSELDASKTVSSPPTS TSNIIPPRHQKPAGAP K T V P R H 3 2 1 0 0 0 0 1 0 2 0 0 0 0 6 7 4 0 0 2 0 0 28 1 2734.425 O76094 O76094 618 645 SRP72 Signal recognition particle subunit SRP72 yes yes 3 5.025E-12 87.72 By MS/MS By MS/MS 1 2 144830000 74897000 69932000 6877 1457 7692 17396;17397;17398 15840;15841;15842;15843;15844;15845;15846;15847;15848;15849;15850;15851;15852 15850 2693;2694;2695;2696;6642 13 TVSSTKLVSFHDDSDEDLLHI KSSSAQQKTVSSTKLV SDEDLLHI________ K T V H I - 0 0 0 4 0 0 1 0 2 1 3 1 0 1 0 4 2 0 0 2 0 0 21 1 2357.1387 P11717 P11717 2471 2491 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 3 0.00137 62.709 By MS/MS By matching 1 1 20422000 8517000 11905000 6878 1567 7693 17399;17400 15853 15853 2882;2883 1 TVSTSSQPEENVDR RSKLQLERTVSTSSQP QPEENVDRANDMLPKK R T V D R A 0 1 1 1 0 1 2 0 0 0 0 0 0 0 1 3 2 0 0 2 0 0 14 0 1547.7063 P42684 P42684 815 828 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.00019971 110.44 By MS/MS By MS/MS 3 3 21646000 13209000 8437000 6879 1699 7694;7695 17401;17402;17403;17404;17405;17406 15854;15855;15856;15857;15858 15854 3121;3122;3123;6700 5 TVSTSSQPEENVDRANDMLPK RSKLQLERTVSTSSQP RANDMLPKKSEESAAP R T V P K K 1 1 2 2 0 1 2 0 0 0 1 1 1 0 2 3 2 0 0 2 0 0 21 1 2317.0856 P42684 P42684 815 835 ABL2 Abelson tyrosine-protein kinase 2 yes yes 3 0.013561 46.839 By MS/MS 1 3963500 3963500 0 6880 1699 7696 17407 15859 15859 3121;3122;3123;6700 1 TVTAMDVVYALK YTEHAKRKTVTAMDVV MDVVYALKRQGRTLYG K T V L K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 1 3 0 0 12 0 1309.6952 P62805 P62805 81 92 HIST1H4A Histone H4 yes yes 2 0.0055598 83.869 By MS/MS By MS/MS 1 1 2300700 1243700 1057000 6881 1801 7697 17408;17409 15860;15861 15860 2 TVTAMDVVYALKR YTEHAKRKTVTAMDVV DVVYALKRQGRTLYGF K T V K R Q 2 1 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 1 3 0 0 13 1 1465.7963 P62805 P62805 81 93 HIST1H4A Histone H4 yes yes 3 0.018257 67.879 By MS/MS 1 0 0 0 6882 1801 7698 17410 15862 15862 1 TVTNAVVTVPAYFNDSQR IAEAYLGKTVTNAVVT AYFNDSQRQATKDAGT K T V Q R Q 2 1 2 1 0 1 0 0 0 0 0 0 0 1 1 1 3 0 1 4 0 0 18 0 1980.9905 P11142;E9PN89;E9PQQ4;E9PQK7;E9PLF4;E9PI65;E9PK54 P11142 138 155 HSPA8 Heat shock cognate 71 kDa protein no no 2;3 0.0033561 63.181 By MS/MS By MS/MS 2 2 10887000 5576200 5311000 6883 1560;812 7699 17411;17412;17413;17414 15863;15864;15865 15864 3 TVTPASSAKTSPAK CEVSVTPKTVTPASSA SAKTSPAKQQAPPVRN K T V A K Q 3 0 0 0 0 0 0 0 0 0 0 2 0 0 2 3 3 0 0 1 0 0 14 1 1344.7249 A0A1C7CYX9;Q16555 A0A1C7CYX9 617 630 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 0.0045721 73.666 By MS/MS By MS/MS 2 1 9682600 3314200 6368400 6884 385 7700;7701 17415;17416;17417 15866;15867 15867 735;736 2 TVTPASSAKTSPAKQQAPPVR CEVSVTPKTVTPASSA KQQAPPVRNLHQSGFS K T V V R N 4 1 0 0 0 2 0 0 0 0 0 2 0 0 4 3 3 0 0 2 0 0 21 2 2121.1542 A0A1C7CYX9;Q16555 A0A1C7CYX9 617 637 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 3 0.012884 55.662 By MS/MS By MS/MS 2 1 27343000 18011000 9332500 6885 385 7702;7703 17418;17419;17420 15868;15869;15870 15869 735;736 3 TVTVTRPTGVSFK STTTTVAKTVTVTRPT RPTGVSFKKDVPPSIN K T V F K K 0 1 0 0 0 0 0 1 0 0 0 1 0 1 1 1 4 0 0 3 0 0 13 1 1391.7773 H3BVC9;A5YKK6 H3BVC9 44 56 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 2 0.005193 76.357 By MS/MS 1 1127800 0 1127800 6886 407 7704 17421 15871 15871 775 1 TVTVWELISSEYFTAEQR PVGGFKGRTVTVWELI EYFTAEQRQELLRQFR R T V Q R Q 1 1 0 0 0 1 3 0 0 1 1 0 0 1 0 2 3 1 1 2 0 0 18 0 2158.0582 Q15149 Q15149 3387 3404 PLEC Plectin yes yes 2 1.9557E-05 116.51 By MS/MS By matching 1 1 9213800 4842600 4371200 6887 1979 7705 17422;17423 15872 15872 1 TVTYEDPQAVGGLASALDNR NSLAEQRKTVTYEDPQ LASALDNRKQSSEGTF K T V N R K 3 1 1 2 0 1 1 2 0 0 2 0 0 0 1 1 2 0 1 2 0 0 20 0 2076.0124 F5H3S6;B7Z2U2;Q6ZVM7 F5H3S6 253 272 TOM1L2 TOM1-like protein 2 yes no 2;3 2.2191E-25 132.13 By MS/MS By MS/MS 2 2 17920000 8593900 9326300 6888 512 7706 17424;17425;17426;17427 15873;15874;15875 15875 6357;6358;7298 2 TVVMRPSVSWEK GSTRDQVRTVVMRPSV RPSVSWEKAGPEEAKA R T V E K A 0 1 0 0 0 0 1 0 0 0 0 1 1 0 1 2 1 1 0 3 0 0 12 1 1417.7388 D6REB6;E7EQR1;Q6NVH2;D6RI07;Q8TE82 D6REB6 34 45 SH3TC1 SH3 domain and tetratricopeptide repeat-containing protein 1 yes no 3 0.016624 52.928 By MS/MS 1 5662900 5662900 0 6889 671 7707 17428 15876 15876 74 1198;1199 0 TWDDDSDPESETDPDAQAK LGRCDDSRTWDDDSDP TDPDAQAKAYVARVLS R T W A K A 2 0 0 6 0 1 2 0 0 0 0 1 0 0 2 2 2 1 0 0 0 0 19 0 2120.8294 K7EL01;Q5XUX1 K7EL01 13 31 FBXW9 F-box/WD repeat-containing protein 9 yes no 2 3.9908E-06 92.773 By MS/MS By MS/MS 1 1 21853000 13212000 8640900 6890 1274 7708 17429;17430 15877;15878;15879 15877 2309 3 TWNDPSVQQDIK DAKRLIGRTWNDPSVQ PSVQQDIKFLPFKVVE R T W I K F 0 0 1 2 0 2 0 0 0 1 0 1 0 0 1 1 1 1 0 1 0 0 12 0 1429.6838 P11021 P11021 102 113 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0069401 78.548 By MS/MS By MS/MS 1 1 7213400 4698200 2515200 6891 1559 7709 17431;17432 15880;15881 15880 2 TWSPTACGGK GGACAGGRTWSPTACG SPTACGGKKLLNKCAA R T W G K K 1 0 0 0 1 0 0 2 0 0 0 1 0 0 1 1 2 1 0 0 0 0 10 0 1063.4757 Q15464 Q15464 209 218 SHB SH2 domain-containing adapter protein B yes yes 2 0.0053139 76.827 By MS/MS 1 1686000 1686000 0 6892 1992 7710 17433 15882 15882 3889 1 TWTLCGTPEYLAPEIILSK FAKRVKGRTWTLCGTP APEIILSKGYNK____ R T W S K G 1 0 0 0 1 0 2 1 0 2 3 1 0 0 2 1 3 1 1 0 0 0 19 0 2191.1235 B1APF8;B1APF9;K7ERP6;B1APG3;A0A087WVC4;A0A0A0MS54;P22694;P22612;P17612;Q15136;B1APG2 B1APF8 192 210 PRKACB;PRKACA;PRKACG;KIN27 cAMP-dependent protein kinase catalytic subunit beta;cAMP-dependent protein kinase catalytic subunit gamma;cAMP-dependent protein kinase catalytic subunit alpha yes no 2;3 8.1954E-20 136.33 By MS/MS By matching 2 2 192880000 167380000 25507000 6893 60 7711 17434;17435;17436;17437 15883;15884 15884 6227;6228 2 TWTLCGTPEYLAPEIILSKGYNK FAKRVKGRTWTLCGTP ILSKGYNK________ R T W N K - 1 0 1 0 1 0 2 2 0 2 3 2 0 0 2 1 3 1 2 0 0 0 23 1 2653.3462 B1APF8;B1APF9;K7ERP6;B1APG3;A0A087WVC4;A0A0A0MS54;P22694;P22612;P17612 B1APF8 192 214 PRKACB;PRKACA;PRKACG cAMP-dependent protein kinase catalytic subunit beta;cAMP-dependent protein kinase catalytic subunit gamma;cAMP-dependent protein kinase catalytic subunit alpha yes no 3 1.9942E-09 90.062 By MS/MS 1 4336700 4336700 0 6894 60 7712 17438 15885 15885 6227;6228 1 TYASGYAHYEEQEN FTNLNLGRTYASGYAH AHYEEQEN________ R T Y E N - 2 0 1 0 0 1 3 1 1 0 0 0 0 0 0 1 1 0 3 0 0 0 14 0 1660.6641 Q9Y3S2 Q9Y3S2 307 320 ZNF330 Zinc finger protein 330 yes yes 2 0.008221 59.418 By matching By MS/MS 1 1 48467000 26730000 21737000 6895 2911 7713 17439;17440 15886 15886 7955 1 TYEQIKVDENENCSSLGSPSEPPQTLDLVR GDKKPRKRTYEQIKVD PQTLDLVRALQDLENA R T Y V R A 0 1 2 2 1 2 4 1 0 1 3 1 0 0 3 4 2 0 1 2 0 0 30 1 3404.6042 A0A0C4DGQ6;Q96P16 A0A0C4DGQ6 139 168 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A yes no 3 0.010817 44.05 By MS/MS By matching 1 1 12804000 9561900 3242000 6896 297 7714 17441;17442 15887 15887 530;531 1 TYGGDTGSPEISFTK VVPSDIPKTYGGDTGS SPEISFTKIFNNVSKE K T Y T K I 0 0 0 1 0 0 1 3 0 1 0 1 0 1 1 2 3 0 1 0 0 0 15 0 1558.7151 H0Y9X0;O94915 H0Y9X0 1135 1149 FRYL Protein furry homolog-like yes no 2 0.00042288 90.259 By MS/MS By MS/MS 1 1 6638900 3513200 3125700 6897 1047 7715 17443;17444 15888;15889 15888 1944;6520 2 TYIDPETYEDPNR HFKFPGTKTYIDPETY ETYEDPNRAVHQFAKE K T Y N R A 0 1 1 2 0 0 2 0 0 1 0 0 0 0 2 0 2 0 2 0 0 0 13 0 1611.7053 Q15375 Q15375 607 619 EPHA7 Ephrin type-A receptor 7 yes yes 2 0.027282 44.203 By MS/MS 1 2788200 2788200 0 6898 1986 7716 17445 15890 15890 0 TYSAPAINAIQGGSFESPK QSMDVLHRTYSAPAIN GGSFESPKKEKRSHRR R T Y P K K 3 0 1 0 0 1 1 2 0 2 0 1 0 1 2 3 1 0 1 0 0 0 19 0 1936.9531 Q9H4L5 Q9H4L5 249 267 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 2 0.0023721 67.655 By MS/MS By MS/MS 1 1 5080600 2200700 2880000 6899 2661 7717 17446;17447 15891;15892 15892 5425 2 TYSDEANQMR PKLFTHKRTYSDEANQ SDEANQMRVAPPRALL R T Y M R V 1 1 1 1 0 1 1 0 0 0 0 0 1 0 0 1 1 0 1 0 0 0 10 0 1213.5034 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 305 314 RAB11FIP5 Rab11 family-interacting protein 5 yes no 2 0.00059367 109.16 By MS/MS By MS/MS 1 1 40485000 23196000 17289000 6900 364 7718 17448;17449 15893;15894 15894 677 2 TYSECEDGTYSPEISWHHR EHYGHREKTYSECEDG PEISWHHRKGTKGSED K T Y H R K 0 1 0 1 1 0 3 1 2 1 0 0 0 0 1 3 2 1 2 0 0 0 19 0 2352.9706 P48651 P48651 415 433 PTDSS1 Phosphatidylserine synthase 1 yes yes 3 0.028521 41.202 By matching By MS/MS 1 1 4375500 2107700 2267800 6901 1719 7719 17450;17451 15895 15895 1 TYSFTSAMSR KRSSSWGRTYSFTSAM SFTSAMSRGCVTEEEN R T Y S R G 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 3 2 0 1 0 0 0 10 0 1149.5125 H7C1F9;Q2PPJ7 H7C1F9 301 310 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 yes no 2 0.0025213 87.667 By matching By MS/MS 1 1 6124600 3120500 3004100 6902 1170 7720 17452;17453 15896 15896 2126 1 TYSLGSALRPSTSR SYVTTSTRTYSLGSAL ALRPSTSRSLYASSPG R T Y S R S 1 2 0 0 0 0 0 1 0 0 2 0 0 0 1 4 2 0 1 0 0 0 14 1 1494.7791 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 P08670 37 50 VIM Vimentin yes no 3 0.0038545 64.65 By matching By MS/MS 1 1 7031500 3875400 3156000 6903 1546 7721 17454;17455 15897;15898 15897 2846 2 TYSLTTPAR LDRGLRKRTYSLTTPA YSLTTPARQRPVPQPS R T Y A R Q 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 3 0 1 0 0 0 9 0 1008.524 Q9Y4H2 Q9Y4H2 575 583 IRS2 Insulin receptor substrate 2 yes yes 2 0.014923 68.355 By MS/MS By MS/MS 1 1 8388900 4478600 3910300 6904 2921 7722 17456;17457 15899;15900 15899 6075 2 TYSYLTPDLWK ATFDAISKTYSYLTPD YLTPDLWKETVFTKSP K T Y W K E 0 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 2 1 2 0 0 0 11 0 1385.6867 H0YEN5;E9PQD7;P15880 H0YEN5 149 159 RPS2 40S ribosomal protein S2 yes no 2 2.1452E-05 128.28 By MS/MS By MS/MS 2 2 14231000 6515300 7715300 6905 838 7723;7724 17458;17459;17460;17461 15901;15902;15903 15903 6454 3 TYVDPFTYEDPNQAVR KHLNQGVRTYVDPFTY EDPNQAVREFAKEIDA R T Y V R E 1 1 1 2 0 1 1 0 0 0 0 0 0 1 2 0 2 0 2 2 0 0 16 0 1913.8796 E9PG71;P54764 E9PG71 595 610 EPHA4 Receptor protein-tyrosine kinase;Ephrin type-A receptor 4 yes no 2 8.6521E-07 119.54 By MS/MS By MS/MS 1 1 41323000 20337000 20986000 6906 788 7725 17462;17463 15904;15905 15904 6439;7383 2 TYVDPHTYEDPTQAVHEFAK HLKLPGLRTYVDPHTY QAVHEFAKELDATNIS R T Y A K E 2 0 0 2 0 1 2 0 2 0 0 1 0 1 2 0 3 0 2 2 0 0 20 0 2347.0757 C9JXA2;P29320 C9JXA2 595 614 EPHA3 Receptor protein-tyrosine kinase;Ephrin type-A receptor 3 yes no 3 1.5538E-05 80.859 By matching By MS/MS 1 1 12368000 6815100 5552800 6907 614 7726 17464;17465 15906 15906 6382;7326 1 VAAAAGSGPSPPGSPGHDRER QVPGGAVRVAAAAGSG SPGHDRERQPLLDRAR R V A E R Q 4 2 0 1 0 0 1 4 1 0 0 0 0 0 4 3 0 0 0 1 0 0 21 1 1971.9511 Q9BTU6 Q9BTU6 38 58 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes yes 3 0.027755 42.042 By MS/MS 1 16256000 0 16256000 6908 2578 7727 17466 15907 15907 0 VAAETQSPSLFGSTK NSESESNKVAAETQSP PSLFGSTKLQQESTFL K V A T K L 2 0 0 0 0 1 1 1 0 0 1 1 0 1 1 3 2 0 0 1 0 0 15 0 1521.7675 Q9UKX7 Q9UKX7 215 229 NUP50 Nuclear pore complex protein Nup50 yes yes 2 1.2789E-14 131.56 By MS/MS By MS/MS 1 1 108650000 53371000 55276000 6909 2838 7728 17467;17468 15908;15909;15910;15911 15909 5839;5840 4 VAAIEALNDGELQK MDQANDKKVAAIEALN LNDGELQKAIDLFTDA K V A Q K A 3 0 1 1 0 1 2 1 0 1 2 1 0 0 0 0 0 0 0 1 0 0 14 0 1469.7726 H7C3I1;F6VDH7;Q3KNR6;Q8IZP2;P50502 H7C3I1 32 45 ST13;ST13P4 Putative protein FAM10A4;Hsc70-interacting protein yes no 2 0.0014335 101.3 By MS/MS By MS/MS 1 1 4903800 2509300 2394500 6910 907 7729 17469;17470 15912;15913 15913 2 VAAQSPPSPASAEALLPALPLR QPGLGKGRVAAQSPPS LLPALPLRNFPQRASC R V A L R N 6 1 0 0 0 1 1 0 0 0 4 0 0 0 5 3 0 0 0 1 0 0 22 0 2155.2001 J3KQR7;Q9Y4F5 J3KQR7 1542 1563 CEP170B Centrosomal protein of 170 kDa protein B yes no 3 0.010456 47.32 By MS/MS 1 2648700 2648700 0 6911 1235 7730 17471 15914 15914 2239 1 VAASMPLSPGGQMEEVAGAVK IDQQQQQKVAASMPLS EEVAGAVKQISDRGPV K V A V K Q 4 0 0 0 0 1 2 3 0 0 1 1 2 0 2 2 0 0 0 3 0 0 21 0 2028.002 Q9UMN6 Q9UMN6 814 834 KMT2B Histone-lysine N-methyltransferase 2B yes yes 2;3 4.2189E-08 88.224 By MS/MS By MS/MS 2 2 20949000 12388000 8560300 6912 2857 7731 17472;17473;17474;17475 15915;15916;15917;15918 15915 5887;5888 4 VAASPKSPTAALNESLVECPK GETENREKVAASPKSP ESLVECPKCNIQYPAT K V A P K C 4 0 1 0 1 0 2 0 0 0 2 2 0 0 3 3 1 0 0 2 0 0 21 1 2168.1147 Q53EZ4 Q53EZ4 422 442 CEP55 Centrosomal protein of 55 kDa yes yes 3 0.0006589 68.168 By MS/MS 1 2958100 2958100 0 6913 2055 7732 17476 15919 15919 4041;6867 1 VADAKGDSESEEDEDLEVPVPSR PPEPGPDRVADAKGDS LEVPVPSRFNRRVSVC R V A S R F 2 1 0 4 0 0 5 1 0 0 1 1 0 0 2 3 0 0 0 3 0 0 23 1 2472.114 P13861 P13861 71 93 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 2;3 5.4792E-13 94.269 By MS/MS By MS/MS 2 2 313450000 171660000 141790000 6914 1577 7733 17477;17478;17479;17480 15920;15921;15922;15923 15923 2897;2898 4 VADLTEQYNEQYGAVR CPIDRSGRVADLTEQY NEQYGAVRTPYTMSYG R V A V R T 2 1 1 1 0 2 2 1 0 0 1 0 0 0 0 0 1 0 2 2 0 0 16 0 1854.8748 Q9BWF3 Q9BWF3 183 198 RBM4 RNA-binding protein 4 yes yes 2 3.4437E-15 132.03 By MS/MS By MS/MS 1 1 26464000 14351000 12113000 6915 2591 7734 17481;17482 15924;15925 15924 7874 2 VADNSFDAK EEIEVDSRVADNSFDA ADNSFDAKRGAAGDWG R V A A K R 2 0 1 2 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 9 0 965.44543 A0A0A0MRM9;Q14978 A0A0A0MRM9 648 656 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0026224 113.38 By MS/MS By MS/MS 2 3 25339000 10628000 14711000 6916 191 7735 17483;17484;17485;17486;17487 15926;15927;15928;15929;15930 15928 343 5 VADPDHDHTGFLTEYVATR ICDFGLARVADPDHDH LTEYVATRWYRAPEIM R V A T R W 2 1 0 3 0 0 1 1 2 0 1 0 0 1 1 0 3 0 1 2 0 0 19 0 2142.997 P28482 P28482 173 191 MAPK1 Mitogen-activated protein kinase 1 yes yes 2;3;4 4.8445E-82 191.93 By MS/MS By MS/MS 5 6 1751800000 936700000 815100000 6917 1641 7736;7737 17488;17489;17490;17491;17492;17493;17494;17495;17496;17497;17498 15931;15932;15933;15934;15935;15936;15937;15938;15939;15940;15941;15942;15943 15935 6689;7584 13 VADSDYEAICKVPR CRGCAALRVADSDYEA EAICKVPRKVARSISC R V A P R K 2 1 0 2 1 0 1 0 0 1 0 1 0 0 1 1 0 0 1 2 0 0 14 1 1621.777 E9PL24;A0A0C4DFQ0 E9PL24 175 188 PDE4DIP yes no 2;3 1.7948E-14 141.58 By MS/MS By MS/MS 2 2 14182000 6604900 7577300 6918 265 7738 17499;17500;17501;17502 15944;15945;15946 15945 7217 3 VAELALSLSSTSDDEPPSSVSHGAK PIKKQKKRVAELALSL SSVSHGAKASTTSLSG R V A A K A 3 0 0 2 0 0 2 1 1 0 3 1 0 0 2 7 1 0 0 2 0 0 25 0 2483.2027 Q5T7F5;Q8N1G2 Q5T7F5 20 44 CMTR1 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 yes no 3 0.00019153 64.619 By MS/MS 1 8245500 8245500 0 6919 2102 7739 17503 15947;15948 15947 4158;4159 2 VAEPGAEATSSTGEESGSEHPPAVPMHNKR GLKALKARVAEPGAEA AVPMHNKRKRPRKKSP R V A K R K 4 1 1 0 0 0 5 3 2 0 0 1 1 0 4 4 2 0 0 2 0 0 30 1 3058.405 Q14684 Q14684 443 472 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 4 0.0019424 49.266 By MS/MS 1 11575000 0 11575000 6920 1955 7740 17504 15949 15949 3797;3798 1 VAFDPEQKPLHGVLKTPTSSPASSPLVAK VSPTGPSRVAFDPEQK ASSPLVAKKPLTTTPR R V A A K K 3 0 0 1 0 1 1 1 1 0 3 3 0 1 5 4 2 0 0 3 0 0 29 2 3000.6284 Q14684 Q14684 713 741 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 4 0.0043746 45.972 By MS/MS By matching 1 1 12438000 6263000 6174900 6921 1955 7741 17505;17506 15950 15950 3793;3794;3795;3796;6824 1 VAFISLSPVR ________________ FISLSPVRRREAEYPG R V A V R R 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 2 0 0 0 2 0 0 10 0 1087.639 Q6ZU65 Q6ZU65 7 16 UBN2 Ubinuclein-2 yes yes 2 0.00018832 112.64 By MS/MS By MS/MS 1 1 8850000 4897600 3952400 6922 2184 7742 17507;17508 15951;15952 15952 4359 2 VAFYGQGFFEEEEGKEYIYKEPK RLFGRYYRVAFYGQGF EYIYKEPKLTGLSEIS R V A P K L 1 0 0 0 0 1 6 3 0 1 0 3 0 3 1 0 0 0 3 1 0 0 23 2 2786.3116 Q96BY6 Q96BY6 1880 1902 DOCK10 Dedicator of cytokinesis protein 10 yes yes 3 0.0069813 44.743 By MS/MS By matching 1 1 9508900 6382000 3127000 6923 2462 7743 17509;17510 15953 15953 7834;7835 1 VAGEAAETDSEPEPEPEPTAAPR RGRPTGLRVAGEAAET PEPTAAPRDLPPLVVQ R V A P R D 5 1 0 1 0 0 6 1 0 0 0 0 0 0 5 1 2 0 0 1 0 0 23 0 2349.0608 Q6QNY0 Q6QNY0 56 78 BLOC1S3 Biogenesis of lysosome-related organelles complex 1 subunit 3 yes yes 2;3 0.0025546 61.167 By MS/MS By MS/MS 2 2 38752000 22464000 16287000 6924 2164 7744 17511;17512;17513;17514 15954;15955;15956;15957;15958 15955 4318;6917 5 VAGGAAPSKPASAK AVKKKPQKVAGGAAPS PSKPASAKKGKAESSN K V A A K K 5 0 0 0 0 0 0 2 0 0 0 2 0 0 2 2 0 0 0 1 0 0 14 1 1210.667 A0A0A0MRM9;Q14978 A0A0A0MRM9 506 519 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0036786 77.24 By MS/MS By MS/MS 1 1 12114000 7497700 4616000 6925 191 7745 17515;17516 15959;15960 15959 344 2 VAGQDGSVVQFK ENDHINLKVAGQDGSV DGSVVQFKIKRHTPLS K V A F K I 1 0 0 1 0 2 0 2 0 0 0 1 0 1 0 1 0 0 0 3 0 0 12 0 1233.6354 A8MUA9;A8MU27;Q6EEV6;P61956;P55854 A8MUA9 21 32 SUMO3;SUMO4;SUMO2 Small ubiquitin-related modifier 4;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 3 yes no 2 0.0053137 84.817 By matching By MS/MS 1 1 6979600 3838100 3141500 6926 432 7746 17517;17518 15961 15961 1 VAHEPVAPPEDKESESEAKVDGETASDSESR ________________ TASDSESRAESAPLPV R V A S R A 4 1 0 3 0 0 7 1 1 0 0 2 0 0 3 5 1 0 0 3 0 0 31 2 3281.4808 O95674 O95674 8 38 CDS2 Phosphatidate cytidylyltransferase 2 yes yes 4 0.013992 40.094 By MS/MS By matching 1 1 47153000 29659000 17494000 6927 1495 7747 17519;17520 15962 15962 2771 1 VALENDDRSEEEKYTAVQR SSAQYKARVALENDDR EKYTAVQRNSSEREGH R V A Q R N 2 2 1 2 0 1 4 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 19 2 2251.0717 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700 H0YH87 379 397 ATXN2 Ataxin-2 no no 3 0.0018132 60.541 By matching By MS/MS 1 1 16903000 8034100 8869400 6928 912 7748 17521;17522 15963 15963 7409 1 VALSDDETKETENMR KEKKRGKRVALSDDET TKETENMRKKRRRIKL R V A M R K 1 1 1 2 0 0 3 0 0 0 1 1 1 0 0 1 2 0 0 1 0 0 15 1 1736.7887 Q15054;H0YD46 Q15054 304 318 POLD3 DNA polymerase delta subunit 3 yes no 2;3 0.00017508 102.5 By MS/MS By MS/MS 3 3 717320000 388030000 329300000 6929 1972 7749;7750 17523;17524;17525;17526;17527;17528 15964;15965;15966 15965 264 3843 3 VALSDDETKETENMRK KEKKRGKRVALSDDET KETENMRKKRRRIKLP R V A R K K 1 1 1 2 0 0 3 0 0 0 1 2 1 0 0 1 2 0 0 1 0 0 16 2 1864.8837 Q15054;H0YD46 Q15054 304 319 POLD3 DNA polymerase delta subunit 3 yes no 3 0.00012168 103.87 By MS/MS By MS/MS 1 1 68338000 30956000 37382000 6930 1972 7751 17529;17530 15967;15968 15967 3843 2 VALSPVTENSTSLSFLDSCNSLTPK LKRQRKRRVALSPVTE SCNSLTPKSTPVKTLP R V A P K S 1 0 2 1 1 0 1 0 0 0 4 1 0 1 2 6 3 0 0 2 0 0 25 0 2666.3109 P10244 P10244 418 442 MYBL2 Myb-related protein B yes yes 3 7.1458E-05 68.569 By MS/MS By matching 1 1 16765000 10908000 5857700 6931 1554 7752 17531;17532 15969 15969 2855 1 VANSPTMVNLLLGK RKGETPLKVANSPTMV MVNLLLGKGTYTSSEE K V A G K G 1 0 2 0 0 0 0 1 0 0 3 1 1 0 1 1 1 0 0 2 0 0 14 0 1455.8119 A0A087WTN8;Q6UB99 A0A087WTN8 273 286 ANKRD11 Ankyrin repeat domain-containing protein 11 yes no 2 9.5138E-05 112.13 By MS/MS By MS/MS 1 1 4337700 1743600 2594100 6932 27 7753 17533;17534 15970;15971 15970 53 2 VAPEEHPVLLTEAPLNPK HTFYNELRVAPEEHPV TEAPLNPKANREKMTQ R V A P K A 2 0 1 0 0 0 3 0 1 0 3 1 0 0 4 0 1 0 0 2 0 0 18 0 1953.0571 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8 P63261 96 113 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2;3 5.4685E-09 96.666 By MS/MS By MS/MS 2 2 39318000 20185000 19133000 6933 1785 7754 17535;17536;17537;17538 15972;15973;15974 15972 3 VAPVINNGSPTILGK LSSLTPAKVAPVINNG GSPTILGKRSYEQHNG K V A G K R 1 0 2 0 0 0 0 2 0 2 1 1 0 0 2 1 1 0 0 2 0 0 15 0 1478.8457 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 360 374 MTA1 Metastasis-associated protein MTA1 yes no 2 2.7152E-20 141.34 By MS/MS By MS/MS 2 2 53714000 29403000 24312000 6934 735 7755;7756 17539;17540;17541;17542 15975;15976;15977;15978 15975 1319 4 VAPVINNGSPTILGKR LSSLTPAKVAPVINNG SPTILGKRSYEQHNGV K V A K R S 1 1 2 0 0 0 0 2 0 2 1 1 0 0 2 1 1 0 0 2 0 0 16 1 1634.9468 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 360 375 MTA1 Metastasis-associated protein MTA1 yes no 2;3 4.9523E-05 93.812 By MS/MS By MS/MS 5 6 52615000 31430000 21186000 6935 735 7757;7758 17543;17544;17545;17546;17547;17548;17549;17550;17551;17552;17553 15979;15980;15981;15982;15983;15984;15985;15986;15987 15980 1319 9 VAQRSPVDSGTILREPTTK GSRSQKVKVAQRSPVD ILREPTTKSVPVNNLP K V A T K S 1 2 0 1 0 1 1 1 0 1 1 1 0 0 2 2 3 0 0 2 0 0 19 2 2054.112 P49454 P49454 3146 3164 CENPF Centromere protein F yes yes 3 0.0081053 55.33 By MS/MS By matching 1 1 22929000 12099000 10829000 6936 1724 7759 17554;17555 15988 15988 3233 1 VASEAPLEHKPQVEASSPR YEELQGLKVASEAPLE QVEASSPRLNPAVTCA K V A P R L 3 1 0 0 0 1 3 0 1 0 1 1 0 0 3 3 0 0 0 2 0 0 19 1 2031.0385 Q8TD19 Q8TD19 853 871 NEK9 Serine/threonine-protein kinase Nek9 yes yes 3 1.9053E-06 89.462 By MS/MS By MS/MS 1 1 38276000 18010000 20265000 6937 2379 7760 17556;17557 15989;15990 15990 4763 2 VASETHSEGSEYEELPKR PRAKPRRRVASETHSE EYEELPKRRRQRGSEN R V A K R R 1 1 0 0 0 0 5 1 1 0 1 1 0 0 1 3 1 0 1 1 0 0 18 1 2046.9494 Q5JSZ5 Q5JSZ5 1130 1147 PRRC2B Protein PRRC2B yes yes 3 0.0081937 47.64 By MS/MS 1 4103000 0 4103000 6938 2074 7761 17558 15991 15991 4086;4087 1 VASMAQSAPSEAPSCSPFGKK SPELQEWRVASMAQSA SCSPFGKKKKYKDKYL R V A K K K 4 0 0 0 1 1 1 1 0 0 0 2 1 1 3 5 0 0 0 1 0 0 21 1 2135.998 Q00013;C9JB34;C9J9J4;A8MTH1 Q00013 228 248 MPP1 55 kDa erythrocyte membrane protein yes no 3 0.0038122 50.117 By MS/MS 1 2440900 2440900 0 6939 1823 7762 17559 15992 15992 3412 1 VASPSQGQVGSSSPK TLTDAQTRVASPSQGQ QVGSSSPKRSGMTAVP R V A P K R 1 0 0 0 0 2 0 2 0 0 0 1 0 0 2 5 0 0 0 2 0 0 15 0 1414.7052 A0A0D9SF60;Q99569 Q99569 325 339 PKP4 Plakophilin-4 no no 2 0.00033201 93.716 By MS/MS By MS/MS 1 1 8943500 4574300 4369300 6940 314;2552 7763 17560;17561 15993;15994 15994 571;572 2 VASSPVMVSNPATR TTLPATVKVASSPVMV MVSNPATRMLKTAAAQ K V A T R M 2 1 1 0 0 0 0 0 0 0 0 0 1 0 2 3 1 0 0 3 0 0 14 0 1414.7238 P51610;A6NEM2 P51610 595 608 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 1.8918E-15 146.77 By MS/MS By MS/MS 2 3 131770000 66328000 65440000 6941 1745 7764;7765 17562;17563;17564;17565;17566 15995;15996;15997;15998;15999 15999 220 3302;3303 5 VATLNSEEESDPPTYK GLVPQQIKVATLNSEE ESDPPTYKDAFPP___ K V A Y K D 1 0 1 1 0 0 3 0 0 0 1 1 0 0 2 2 2 0 1 1 0 0 16 0 1778.821 C9JMQ6;C9JQ82;C9JBS3;C9JEJ8;C9JHN6;C9JT62;C9JHS7;C9JK79;C9JHZ8;C9JES8;C9JZI8;C9J5E5;C9JIZ1;A0A024R4E5;Q00341 C9JMQ6 26 41 HDLBP Vigilin yes no 2 0.013705 56.851 By MS/MS By matching 1 1 53717000 30241000 23476000 6942 1 7766 17567;17568 16000 16000 2 1 VATPVDWKDGDSVMVLPTIPEEEAK LQLTAEKRVATPVDWK TIPEEEAKKLFPKGVF R V A A K K 2 0 0 3 0 0 3 1 0 1 1 2 1 0 3 1 2 1 0 4 0 0 25 1 2725.352 P30041 P30041 175 199 PRDX6 Peroxiredoxin-6 yes yes 3 0.0013105 56.766 By MS/MS By MS/MS 1 1 22297000 13114000 9182600 6943 1650 7767 17569;17570 16001;16002 16002 6693 2 VAVGELTDEDVK HVAKKDNKVAVGELTD ELTDEDVKMITSLSKD K V A V K M 1 0 0 2 0 0 2 1 0 0 1 1 0 0 0 0 1 0 0 3 0 0 12 0 1273.6402 P49736;H0Y8E6 P49736 451 462 MCM2 DNA replication licensing factor MCM2 yes no 2 0.016607 72.321 By MS/MS By MS/MS 2 1 2516100 1198700 1317400 6944 1726 7768 17571;17572;17573 16003;16004 16004 2 VAYHPYPEDYGDIEIGSHR SCPASSPKVAYHPYPE DIEIGSHRSSSSNLGA K V A H R S 1 1 0 2 0 0 2 2 2 2 0 0 0 0 2 1 0 0 3 1 0 0 19 0 2217.0127 Q9Y4H2 Q9Y4H2 623 641 IRS2 Insulin receptor substrate 2 yes yes 3 0.003351 56.424 By MS/MS By MS/MS 1 1 7701500 4452200 3249200 6945 2921 7769 17574;17575 16005;16006 16005 7957 2 VCENIPIVLCGNK NWHRDLVRVCENIPIV PIVLCGNKVDIKDRKV R V C N K V 0 0 2 0 2 0 1 1 0 2 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1514.7585 B5MDF5;J3KQE5;P62826;F5H018;B4DV51 B5MDF5 128 140 RAN GTP-binding nuclear protein Ran yes no 2 0.0097874 63.283 By MS/MS By matching 1 1 2479400 1432100 1047300 6946 506 7770 17576;17577 16007 16007 0 VCLCPMIIGRGNDQVAISSKFETR TFTMTLARVCLCPMII ISSKFETREDIAVIRN R V C T R E 1 2 1 1 2 1 1 2 0 3 1 1 1 1 1 2 1 0 0 2 0 0 24 2 2750.3666 E7EVE9;A8MX75;P18074 E7EVE9 410 433 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit yes no 3 0.021125 44.264 By matching By MS/MS 1 1 60728000 27777000 32951000 6947 437 7771 17578;17579 16008 16008 827 1 VCTISPAPR APEPPAKRVCTISPAP CTISPAPRHSPALTVP R V C P R H 1 1 0 0 1 0 0 0 0 1 0 0 0 0 2 1 1 0 0 1 0 0 9 0 999.51715 O43439 O43439 260 268 CBFA2T2 Protein CBFA2T2 yes yes 2 0.0032055 95.483 By MS/MS By MS/MS 1 1 7160000 4001200 3158700 6948 1384 7772 17580;17581 16009;16010 16009 2534 2 VCTLAIIDPGDSDIIR TACGKYYRVCTLAIID PGDSDIIRSMPEQTGE R V C I R S 1 1 0 3 1 0 0 1 0 4 1 0 0 0 1 1 1 0 0 1 0 0 16 0 1756.9029 E5RI99;P62888;A0A0C4DH44;A0A0B4J213 E5RI99 91 106 RPL30 60S ribosomal protein L30 yes no 2 0.00041568 89.301 By MS/MS By MS/MS 1 1 4212300 2039700 2172600 6949 700 7773 17582;17583 16011;16012 16011 2 VDDDSLGEFPVTNSR KRGAPDPRVDDDSLGE EFPVTNSRARKRILEP R V D S R A 0 1 1 3 0 0 1 1 0 0 1 0 0 1 1 2 1 0 0 2 0 0 15 0 1649.7533 J3KMZ8;Q92785 J3KMZ8 138 152 DPF2 Zinc finger protein ubi-d4 yes no 2 0.00011279 109.14 By MS/MS By MS/MS 1 1 33022000 17941000 15081000 6950 1219 7774 17584;17585 16013;16014 16013 2209 2 VDDKPSSPGDSSKK ERERGTSRVDDKPSSP SPGDSSKKRGPKPRKE R V D K K R 0 0 0 3 0 0 0 1 0 0 0 3 0 0 2 4 0 0 0 1 0 0 14 2 1445.6998 Q9HC52;C9JM54;C9J6K3 Q9HC52 185 198 CBX8 Chromobox protein homolog 8 yes no 3 5.2765E-05 114.06 By MS/MS By MS/MS 1 1 17282000 7712100 9570300 6951 2691 7775 17586;17587 16015;16016 16016 5491 2 VDDSTGTVISDVEEDAGELSR QKKKPRERVDDSTGTV EDAGELSRESMWDLSC R V D S R E 1 1 0 4 0 0 3 2 0 1 1 0 0 0 0 3 2 0 0 3 0 0 21 0 2192.9921 S4R403;Q9Y2D8 S4R403 299 319 SSX2IP Afadin- and alpha-actinin-binding protein yes no 2 0.0070023 56.081 By MS/MS By matching 1 1 9995300 6096000 3899300 6952 2886 7776 17588;17589 16017 16017 6019 1 VDLYQQASPPDALR SGVFRTQRVDLYQQAS ASPPDALRWIPKPWER R V D L R W 2 1 0 2 0 2 0 0 0 0 2 0 0 0 2 1 0 0 1 1 0 0 14 0 1571.7944 P48634 P48634 2106 2119 PRRC2A Protein PRRC2A yes yes 2 0.0023541 79.804 By MS/MS 1 4234100 4234100 0 6953 1718 7777 17590 16018 16018 3217 1 VDNDENEHQLSLR ADKDYHFKVDNDENEH NEHQLSLRTVSLGAGA K V D L R T 0 1 2 2 0 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1567.7227 P06748;E5RGW4 P06748 33 45 NPM1 Nucleophosmin yes no 3 0.0037922 82.774 By MS/MS By matching 1 1 5398700 2812900 2585800 6954 1533 7778 17591;17592 16019 16019 1 VDNLTYRTSPDTLR VEGMTSLKVDNLTYRT RTSPDTLRRVFEKYGR K V D L R R 0 2 1 2 0 0 0 0 0 0 2 0 0 0 1 1 3 0 1 1 0 0 14 1 1649.8373 Q01130;J3QL05;J3KP15 Q01130 18 31 SRSF2 Serine/arginine-rich splicing factor 2 yes no 2;3 0.0018107 81.128 By MS/MS By MS/MS 2 2 83452000 44604000 38848000 6955 1828 7779 17593;17594;17595;17596 16020;16021 16021 3423 2 VDSEGDFSENDDAAGDFR EPDTKLARVDSEGDFS DDAAGDFRSGDEEFKG R V D F R S 2 1 1 5 0 0 2 2 0 0 0 0 0 2 0 2 0 0 0 1 0 0 18 0 1944.761 M0QYL4;O43823 M0QYL4 135 152 AKAP8 A-kinase anchor protein 8 yes no 2 0.00012954 82.007 By matching By MS/MS 1 2 10794000 1390200 9403700 6956 1304 7780 17597;17598;17599 16022;16023 16022 2340;2341 2 VDSTTCLFPVEEK KGSCNLSRVDSTTCLF CLFPVEEKAVEYYFAS R V D E K A 0 0 0 1 1 0 2 0 0 0 1 1 0 1 1 1 2 0 0 2 0 0 13 0 1523.7178 Q06210 Q06210 259 271 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 1.4054E-38 185.95 By MS/MS By MS/MS 1 1 147130000 77766000 69366000 6957 1857 7781 17600;17601 16024;16025 16024 3497;6771 2 VDYVVVDQQK GSSVADERVDYVVVDQ YVVVDQQKTLALKSTR R V D Q K T 0 0 0 2 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 4 0 0 10 0 1191.6136 B7Z3B9;Q13480 B7Z3B9 554 563 GAB1 GRB2-associated-binding protein 1 yes no 2 0.025322 53.751 By MS/MS By matching 1 1 6644100 3439700 3204300 6958 513 7782 17602;17603 16026 16026 7301 1 VEAEAGGSGARTPPLSR ATPLPSLRVEAEAGGS ARTPPLSRRKAVDMRL R V E S R R 3 2 0 0 0 0 2 3 0 0 1 0 0 0 2 2 1 0 0 1 0 0 17 1 1653.8434 Q9Y3Q8 Q9Y3Q8 218 234 TSC22D4 TSC22 domain family protein 4 yes yes 3 0.0029028 63.894 By matching By MS/MS 1 1 26798000 14227000 12571000 6959 2910 7783 17604;17605 16027 16027 7128 1 VEEEQEADEEDVSEEEAESK ESAQPLKKVEEEQEAD SEEEAESKEGTNKDFP K V E S K E 2 0 0 2 0 1 10 0 0 0 0 1 0 0 0 2 0 0 0 2 0 0 20 0 2308.919 Q9H3N1 Q9H3N1 235 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 1.1025E-08 98.443 By MS/MS By MS/MS 1 1 97353000 53284000 44068000 6960 2653 7784 17606;17607 16028;16029;16030 16030 5408 3 VEEESTGDPFGFDSDDESLPVSSK QEIPKKPKVEEESTGD ESLPVSSKNLAQVKCS K V E S K N 0 0 0 4 0 0 4 2 0 0 1 1 0 2 2 5 1 0 0 2 0 0 24 0 2572.0977 Q7Z5K2 Q7Z5K2 64 87 WAPAL Wings apart-like protein homolog yes yes 2;3 7.0718E-20 116.94 By MS/MS By MS/MS 2 2 223500000 112770000 110720000 6961 2220 7785 17608;17609;17610;17611 16031;16032;16033;16034 16032 4438;4439 4 VEEFLYEKLDR ________________ FLYEKLDRKVPSRVTN - V E D R K 0 1 0 1 0 0 3 0 0 0 2 1 0 1 0 0 0 0 1 1 0 0 11 1 1439.7296 H7C1Z6;F8WFB9;B7ZC39;B7ZC38;Q9NR46 H7C1Z6 1 11 SH3GLB2 Endophilin-B2 yes no 2;3 4.5373E-05 115.33 By MS/MS By MS/MS 2 2 18641000 11937000 6703700 6962 522 7786 17612;17613;17614;17615 16035;16036;16037;16038 16036 7303 4 VEFMDDTSR QGQCTQVRVEFMDDTS EFMDDTSRSIIRNVKG R V E S R S 0 1 0 2 0 0 1 0 0 0 0 0 1 1 0 1 1 0 0 1 0 0 9 0 1098.4652 P62857 P62857 32 40 RPS28 40S ribosomal protein S28 yes yes 2 0.0086974 102.51 By MS/MS By matching 1 1 10151000 5575100 4576100 6963 1803 7787 17616;17617 16039 16039 1 VEGDNIYVR EGKKNSLRVEGDNIYV EGDNIYVRHSNLMLEE R V E V R H 0 1 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 2 0 0 9 0 1063.5298 O43491;H0Y5B0;E9PMV8;E9PPC9;Q6ZSX4 O43491 617 625 EPB41L2 Band 4.1-like protein 2 yes no 2 0.00099486 135.83 By MS/MS By MS/MS 1 1 365460000 193940000 171520000 6964 1387 7788 17618;17619 16040;16041 16040 7520 2 VEILANDQGNR VGVFQQGRVEILANDQ LANDQGNRTTPSYVAF R V E N R T 1 1 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1227.6208 P17066;P48741 P17066 28 38 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 yes no 2 0.0003687 111.46 By MS/MS By MS/MS 1 1 25027000 13991000 11036000 6965 1590 7789 17620;17621 16042;16043 16042 2 VEKIGEGTYGVVYK ________________ GTYGVVYKARNKLTGE K V E Y K A 0 0 0 0 0 0 2 3 0 1 0 2 0 0 0 0 1 0 2 3 0 0 14 1 1540.8137 G3V317;E7ESI2;G3V5T9;P24941;K7ELV5;Q00526 G3V317 7 20 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 2;3 1.2515E-05 117.7 By MS/MS By MS/MS 2 2 42460000 23011000 19449000 6966 732 7790 17622;17623;17624;17625 16044;16045;16046;16047 16045 6424;7363 4 VEKIGEGTYGVVYKAR ________________ YGVVYKARNKLTGEVV K V E A R N 1 1 0 0 0 0 2 3 0 1 0 2 0 0 0 0 1 0 2 3 0 0 16 2 1767.9519 G3V317;E7ESI2;G3V5T9;P24941 G3V317 7 22 CDK2 Cyclin-dependent kinase 2 yes no 3 9.4068E-06 110.44 By MS/MS By MS/MS 1 1 9682600 5957800 3724800 6967 732 7791 17626;17627 16048;16049 16048 6424;7363 2 VEKMRQSVLEGLSFSR GQADQAAKVEKMRQSV LEGLSFSRQSHTLPFP K V E S R Q 0 2 0 0 0 1 2 1 0 0 2 1 1 1 0 3 0 0 0 2 0 0 16 2 1864.9829 A0A0C4DG79;Q9NZB2 A0A0C4DG79 257 272 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 2 0.00069615 77.746 By MS/MS By matching 1 1 21122000 11315000 9807600 6968 282 7792 17628;17629 16050 16050 502;503 1 VELQELNDR KNTRTNEKVELQELND ELQELNDRFANYIDKV K V E D R F 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1114.5619 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;P17661 P08670 105 113 VIM;DES Vimentin;Desmin yes no 2 0.0032354 128.12 By MS/MS By MS/MS 1 1 6146600 2923400 3223300 6969 1546 7793 17630;17631 16051;16052 16052 2 VELSPGPPKPAGR GDAGGDAKVELSPGPP GPPKPAGREVEPAPVG K V E G R E 1 1 0 0 0 0 1 2 0 0 1 1 0 0 4 1 0 0 0 1 0 0 13 1 1303.7248 A0A087WXE2;Q8IZ73 A0A087WXE2 32 44 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes no 2 0.0081679 69.314 By matching By MS/MS 1 1 13827000 6476100 7351200 6970 86 7794 17632;17633 16053 16053 161 1 VEMGTSSQNDVDMSWIPQETLNQINKASPR KRKRPIQKVEMGTSSQ QINKASPRRLPRKRAQ K V E P R R 1 1 3 2 0 3 2 1 0 2 1 1 2 0 2 4 2 1 0 2 0 0 30 1 3374.5871 C9JBX5;P43307 C9JBX5 173 202 SSR1 Translocon-associated protein subunit alpha yes no 3 0.00060608 56.903 By MS/MS 1 24260000 24260000 0 6971 583 7795 17634 16054 16054 1064 1 VEMYSGSDDDDDFNKLPK SKKTAKPKVEMYSGSD DDFNKLPKKAKGKAQK K V E P K K 0 0 1 5 0 0 1 1 0 0 1 2 1 1 1 2 0 0 1 1 0 0 18 1 2073.8837 A0A087WUT6;O60841 A0A087WUT6 131 148 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 8.0225E-06 93.738 By MS/MS By MS/MS 2 2 557180000 303070000 254110000 6972 49 7796 17635;17636;17637;17638 16055;16056;16057 16056 91;92 3 VEMYSGSDDDDDFNKLPKK SKKTAKPKVEMYSGSD DFNKLPKKAKGKAQKS K V E K K A 0 0 1 5 0 0 1 1 0 0 1 3 1 1 1 2 0 0 1 1 0 0 19 2 2201.9787 A0A087WUT6;O60841 A0A087WUT6 131 149 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.022957 48.729 By matching By MS/MS 1 1 33069000 16776000 16293000 6973 49 7797 17639;17640 16058 16058 91;92 1 VENSPQVDGSPPGLEGLLGGIGEK RRAEASARVENSPQVD LLGGIGEKGVHRPAPR R V E E K G 0 0 1 1 0 1 3 6 0 1 3 1 0 0 3 2 0 0 0 2 0 0 24 0 2348.186 E7EXA6;A0A0D9SF58;Q8WVB6 E7EXA6 862 885 CHTF18 Chromosome transmission fidelity protein 18 homolog yes no 2;3 3.0326E-13 97.291 By MS/MS By MS/MS 2 2 45207000 23870000 21337000 6974 313 7798 17641;17642;17643;17644 16059;16060;16061;16062 16062 568 4 VEQALSEVASSLQSSAPK ATSVAASRVEQALSEV SLQSSAPKQGPLHPWM R V E P K Q 3 0 0 0 0 2 2 0 0 0 2 1 0 0 1 5 0 0 0 2 0 0 18 0 1829.9371 H0YK02;H0YJS2;A0A0C4DGK5;Q86TV6 H0YK02 77 94 TTC7B Tetratricopeptide repeat protein 7B yes no 2 3.1564E-09 117.18 By MS/MS By MS/MS 1 1 10439000 5346700 5092300 6975 295 7799 17645;17646 16063;16064 16063 526;527 2 VEQATKPSFESGR SLDGKAIKVEQATKPS KPSFESGRRGPPPPPR K V E G R R 1 1 0 0 0 1 2 1 0 0 0 1 0 1 1 2 1 0 0 1 0 0 13 1 1434.7103 P38159;H0Y6E7;H3BT71 P38159 81 93 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 2 0.0042138 80.507 By matching By MS/MS 1 1 20195000 7805100 12390000 6976 1678 7800 17647;17648 16065 16065 3091 1 VEQMPQASPGLAPR SGELVEPRVEQMPQAS ASPGLAPRTRGSSGPQ R V E P R T 2 1 0 0 0 2 1 1 0 0 1 0 1 0 3 1 0 0 0 1 0 0 14 0 1479.7504 Q8N3F8;H0Y6J8 Q8N3F8 571 584 MICALL1 MICAL-like protein 1 yes no 2 5.1713E-12 130.02 By MS/MS By MS/MS 1 1 26113000 16537000 9576700 6977 2305 7801 17649;17650 16066;16067 16066 4630 2 VERADGYEPPVQESV TGDETGAKVERADGYE EPPVQESV________ K V E S V - 1 1 0 1 0 1 3 1 0 0 0 0 0 0 2 1 0 0 1 3 0 0 15 1 1673.7897 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 213 227 RPS3A 40S ribosomal protein S3a yes no 2 0.020181 53.448 By matching By MS/MS 1 1 5232100 2611700 2620400 6978 652 7802 17651;17652 16068 16068 1171;7342 1 VERPPSPFSMAPQASLPPVPPR MKELAGAKVERPPSPF SLPPVPPRLDLLPQRV K V E P R L 2 2 0 0 0 1 1 0 0 0 1 0 1 1 8 3 0 0 0 2 0 0 22 1 2356.2362 A0A1B0GW38;A0A0U1RQX8;P22681 A0A1B0GW38 476 497 CBL E3 ubiquitin-protein ligase CBL yes no 3 0.00097704 61.276 By MS/MS 1 1813500 1813500 0 6979 345 7803 17653 16069 16069 637 1 VETFSGVYK QQNNVEHKVETFSGVY ETFSGVYKKLTGKDVN K V E Y K K 0 0 0 0 0 0 1 1 0 0 0 1 0 1 0 1 1 0 1 2 0 0 9 0 1028.5179 P62081 P62081 170 178 RPS7 40S ribosomal protein S7 yes yes 2 0.0044127 114.28 By MS/MS By MS/MS 1 1 2992500 1322600 1669900 6980 1790 7804 17654;17655 16070;16071 16071 2 VETGVLKPGMVVTFAPVNVTTEVK IGTVPVGRVETGVLKP VNVTTEVKSVEMHHEA R V E V K S 1 0 1 0 0 0 2 2 0 0 1 2 1 1 2 0 4 0 0 7 0 0 24 1 2514.3767 P68104;A0A087WVQ9;Q5VTE0 P68104 267 290 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3 yes no 3 0.0047268 58.516 By MS/MS By matching 1 1 15651000 11493000 4157500 6981 1809 7805 17656;17657 16072 16072 1 VETIGDAYMVASGLPK VDHHDVYKVETIGDAY MVASGLPKRNGNRHAI K V E P K R 2 0 0 1 0 0 1 2 0 1 1 1 1 0 1 1 1 0 1 2 0 0 16 0 1649.8335 P25092;P51841 P25092 868 883 GUCY2C;GUCY2F Heat-stable enterotoxin receptor;Retinal guanylyl cyclase 2 yes no 2 0.0022494 81.327 By MS/MS 1 0 0 0 6982 1629 7806 17658 16073 16073 204 3016 1 VETPSHPGGVSEEFWER DRHYRSARVETPSHPG VSEEFWERSRQRERER R V E E R S 0 1 0 0 0 0 4 2 1 0 0 0 0 1 2 2 1 1 0 2 0 0 17 0 1941.8857 Q92620;H3BQT9 Q92620 115 131 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes no 3 0.00018354 82.349 By MS/MS By MS/MS 1 1 10061000 4966100 5094500 6983 2428 7807 17659;17660 16074;16075;16076 16075 6983 3 VEYQELPNK V E N K 0 0 1 0 0 1 2 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 9 0 1118.5608 REV__K7EMN4 yes no 2 0.01569 51.059 By matching By MS/MS 1 1 8148600 4896700 3251900 + 6984 2970 7808 17661;17662 16077 16077 7971 1 VFAVVITDGR ESRRQKTRVFAVVITD AVVITDGRHDPRDDDL R V F G R H 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 3 0 0 10 0 1075.6026 P12110 P12110 725 734 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.013445 73.985 By MS/MS By MS/MS 1 1 4212700 2055700 2156900 6985 1569 7809 17663;17664 16078;16079 16078 2 VFDAIMNFK LILDPIFKVFDAIMNF FDAIMNFKKEETAKLI K V F F K K 1 0 1 1 0 0 0 0 0 1 0 1 1 2 0 0 0 0 0 1 0 0 9 0 1083.5423 P13639 P13639 300 308 EEF2 Elongation factor 2 yes yes 2 0.0058411 95.909 By MS/MS By MS/MS 1 1 849860 0 849860 6986 1575 7810 17665;17666 16080;16081 16081 2 VFDDESDEKEDEEYADEK EEEDTYEKVFDDESDE DEEYADEKGLEAADKK K V F E K G 1 0 0 5 0 0 6 0 0 0 0 2 0 1 0 1 0 0 1 1 0 0 18 1 2190.8601 O43719 O43719 637 654 HTATSF1 HIV Tat-specific factor 1 yes yes 2;3 4.262E-27 138.2 By MS/MS By MS/MS 2 2 142900000 73733000 69166000 6987 1392 7811 17667;17668;17669;17670 16082;16083;16084;16085 16085 2556 4 VFDDESDEKEDEEYADEKGLEAADK EEEDTYEKVFDDESDE KGLEAADKKAEEGDAD K V F D K K 3 0 0 6 0 0 7 1 0 0 1 3 0 1 0 1 0 0 1 1 0 0 25 2 2875.2043 O43719 O43719 637 661 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.00031651 64.295 By MS/MS By MS/MS 1 1 19225000 10035000 9190200 6988 1392 7812 17671;17672 16086;16087 16087 2556 2 VFDEFKPLVEEPQNLIK DPHECYAKVFDEFKPL EEPQNLIKQNCELFEQ K V F I K Q 0 0 1 1 0 1 3 0 0 1 2 2 0 2 2 0 0 0 0 2 0 0 17 1 2044.0881 CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;A0A0C4DGB6;C9JKR2;A0A087WWT3 CON__P02768-1 397 413 ALB Serum albumin yes no 3 0.013388 65.374 By MS/MS By matching 1 1 1835100 735310 1099800 + 6989 633 7813 17673;17674 16088 16088 1 VFDLQFSTDSPR RLQRRRSRVFDLQFST QFSTDSPRLLASPSSR R V F P R L 0 1 0 2 0 1 0 0 0 0 1 0 0 2 1 2 1 0 0 1 0 0 12 0 1410.6779 C9JZP1;C9J470;E9PHA2;Q15003 C9JZP1 72 83 NCAPH Condensin complex subunit 2 yes no 2 0.00018122 112.15 By MS/MS By MS/MS 1 1 10705000 6113200 4592200 6990 561 7814 17675;17676 16089;16090 16090 1032 2 VFDQQSSPMVTR SGLEILSKVFDQQSSP QSSPMVTRLLQQQNLP K V F T R L 0 1 0 1 0 2 0 0 0 0 0 0 1 1 1 2 1 0 0 2 0 0 12 0 1393.666 A0A0A0MTP6;O15357 A0A0A0MTP6 169 180 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 0.0038963 95.417 By MS/MS By MS/MS 1 1 1550000 1550000 0 6991 250 7815 17677;17678 16091;16092 16092 452;453 2 VFGALGPIGPSSPGLTLGGLAVSEHR APPMEGARVFGALGPI GLAVSEHRLSNKLLAW R V F H R L 2 1 0 0 0 0 1 6 1 1 4 0 0 1 3 3 1 0 0 2 0 0 26 0 2488.3438 Q86YD1;M0QZB9;M0QYQ4;M0QYH7;A0A0C4DGR2;M0QY25 Q86YD1 62 87 PTOV1 Prostate tumor-overexpressed gene 1 protein yes no 3 1.6638E-42 133.94 By MS/MS By matching 1 1 27468000 22323000 5145000 6992 2254 7816 17679;17680 16093 16093 4521;4522 1 VFGSLER TPKRKGAKVFGSLERG KVFGSLERGLDKVITV K V F E R G 0 1 0 0 0 0 1 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 7 0 806.42865 Q14680 Q14680 526 532 MELK Maternal embryonic leucine zipper kinase yes yes 2 0.0097813 100.25 By MS/MS 1 18541000 18541000 0 6993 1954 7817 17681 16094 16094 3789 1 VFLENVIR EETRGVLKVFLENVIR VFLENVIRDAVTYTEH K V F I R D 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 8 0 988.57057 P62805 P62805 61 68 HIST1H4A Histone H4 yes yes 2 0.0092592 148.33 By MS/MS By MS/MS 1 1 42962000 24378000 18584000 6994 1801 7818 17682;17683 16095;16096 16096 2 VFNPYTEFK EPQSPSRRVFNPYTEF FNPYTEFKEFSRKQIK R V F F K E 0 0 1 0 0 0 1 0 0 0 0 1 0 2 1 0 1 0 1 1 0 0 9 0 1143.5601 Q96C19 Q96C19 79 87 EFHD2 EF-hand domain-containing protein D2 yes yes 2 0.0029914 85.161 By MS/MS 1 612150 612150 0 6995 2465 7819 17684 16097 16097 7837 1 VFPEPTESGDEGEELGLPLLSTR LATASGQRVFPEPTES GLPLLSTRHVHLECRL R V F T R H 0 1 0 1 0 0 5 3 0 0 4 0 0 1 3 2 2 0 0 1 0 0 23 0 2471.2068 E9PMG4;Q9BUR4 E9PMG4 451 473 WRAP53 Telomerase Cajal body protein 1 yes no 2;3 0.0022219 57.826 By MS/MS By MS/MS 2 2 50177000 31837000 18340000 6996 829 7820 17685;17686;17687;17688 16098;16099;16100;16101 16101 6452 4 VFPGSTTEDYNLIVIER DSQPPVFKVFPGSTTE YNLIVIERGAAAAATG K V F E R G 0 1 1 1 0 0 2 1 0 2 1 0 0 1 1 1 2 0 1 2 0 0 17 0 1951.9891 Q13263;M0R0K9 Q13263 508 524 TRIM28 Transcription intermediary factor 1-beta yes no 2 0.0093829 53.967 By matching By MS/MS 1 1 6527300 3904500 2622800 6997 1908 7821 17689;17690 16102 16102 7685 1 VFQQHYTNK LLRQKLKKVFQQHYTN FQQHYTNKIRALRNRL K V F N K I 0 0 1 0 0 2 0 0 1 0 0 1 0 1 0 0 1 0 1 1 0 0 9 0 1163.5724 O43683 O43683 1057 1065 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 2 0.030217 63.565 By MS/MS 1 0 0 0 6998 1391 7822 17691 16103 16103 1 VFQTEAELQEVISDLQSK SCCPVCQRVFQTEAEL VISDLQSKLRLAPDKL R V F S K L 1 0 0 1 0 3 3 0 0 1 2 1 0 1 0 2 1 0 0 2 0 0 18 0 2063.0423 E7EN38;Q92878 E7EN38 626 643 RAD50 DNA repair protein RAD50 yes no 2 4.9194E-05 88.565 By MS/MS 1 3415800 3415800 0 6999 708 7823 17692 16104 16104 6414 1 VFSGLVSTGLK GRFYAFGRVFSGLVST GLVSTGLKVRIMGPNY R V F L K V 0 0 0 0 0 0 0 2 0 0 2 1 0 1 0 2 1 0 0 2 0 0 11 0 1106.6336 P13639 P13639 416 426 EEF2 Elongation factor 2 yes yes 2 0.001877 101.9 By MS/MS By MS/MS 1 1 4576200 2495300 2080800 7000 1575 7824 17693;17694 16105;16106 16106 2 VFSPVIR GNKGFGRKVFSPVIRS KVFSPVIRSSFTHCRP K V F I R S 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 2 0 0 7 0 816.48577 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 1403 1409 CIC Protein capicua homolog yes no 2 0.020027 88.37 By matching By MS/MS 1 1 5495300 2959200 2536100 7001 1207 7825 17695;17696 16107 16107 2193 1 VGALDVPASQFLGSATSPGPR MSGGHGLRVGALDVPA SATSPGPRTAPAAKPE R V G P R T 3 1 0 1 0 1 0 3 0 0 2 0 0 1 3 3 1 0 0 2 0 0 21 0 2026.0484 P49815;H3BMQ0 P49815 1139 1159 TSC2 Tuberin yes no 2 0.011168 52.265 By MS/MS By MS/MS 1 1 4293400 2399900 1893500 7002 1731 7826 17697;17698 16108;16109 16109 3276 2 VGDGDLSAEEIPENEVSLR TMEEQKTKVGDGDLSA PENEVSLRRAVSKKKT K V G L R R 1 1 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 0 19 0 2027.9647 Q14684 Q14684 239 257 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2;3 0.0030256 66.289 By MS/MS By matching 2 2 122580000 71585000 50996000 7003 1955 7827 17699;17700;17701;17702 16110;16111 16110 3799 2 VGDGDLSAEEIPENEVSLRR TMEEQKTKVGDGDLSA ENEVSLRRAVSKKKTA K V G R R A 1 2 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 0 20 1 2184.0659 Q14684 Q14684 239 258 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 3 1.9956E-08 87.99 By MS/MS 1 43704000 0 43704000 7004 1955 7828 17703 16112 16112 3799 1 VGDPPQPLPEEPMEVQGAERASPEPQR AILRYVRRVGDPPQPL RASPEPQRENASPAPG R V G Q R E 2 2 0 1 0 3 5 2 0 0 1 0 1 0 7 1 0 0 0 2 0 0 27 1 2939.4083 A0A024RCR6;A0A0G2JK23;P46379;A0A0G2JL47;H0Y710 A0A024RCR6 937 963 BAT3;BAG6 Large proline-rich protein BAG6 yes no 3 0.00057108 59.212 By MS/MS By MS/MS 1 2 32347000 9335800 23011000 7005 4 7829;7830 17704;17705;17706 16113;16114 16113 1 5 2 VGDSTPVSEKPVSAAVDANASESP APTTVEDRVGDSTPVS DANASESP________ R V G S P - 4 0 1 2 0 0 2 1 0 0 0 1 0 0 3 5 1 0 0 4 0 0 24 1 2313.0972 Q9H8Y8 Q9H8Y8 429 452 GORASP2 Golgi reassembly-stacking protein 2 yes yes 2;3 0.00098475 63.674 By matching By MS/MS 2 2 73591000 39098000 34493000 7006 2681 7831 17707;17708;17709;17710 16115;16116 16116 5470 2 VGDTEKPEPERSPPNR EPKARPLRVGDTEKPE PERSPPNRKRPANEKA R V G N R K 0 2 1 1 0 0 3 1 0 0 0 1 0 0 4 1 1 0 0 1 0 0 16 2 1806.886 Q9NZ63 Q9NZ63 250 265 C9orf78 Uncharacterized protein C9orf78 yes yes 3 9.1445E-24 150.26 By MS/MS By MS/MS 1 1 117530000 64012000 53522000 7007 2764 7832 17711;17712 16117;16118;16119;16120 16120 5677 4 VGDVTPQVK KAAPAPGKVGDVTPQV GDVTPQVKGGALPPAK K V G V K G 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 1 0 0 3 0 0 9 0 941.5182 Q13428;J3KQ96;E7ETY2 Q13428 245 253 TCOF1 Treacle protein yes no 2 0.0124 94.767 By MS/MS By MS/MS 1 1 0 0 0 7008 1915 7833 17713;17714 16121;16122 16122 2 VGDYGIGFSRYK LTSDLNVKVGDYGIGF GIGFSRYKEDYIETDD K V G Y K E 0 1 0 1 0 0 0 3 0 1 0 1 0 1 0 1 0 0 2 1 0 0 12 1 1360.6776 Q8IWU2 Q8IWU2 281 292 LMTK2 Serine/threonine-protein kinase LMTK2 yes yes 2 0.026876 50.473 By MS/MS 1 1568600 0 1568600 7009 2272 7834 17715 16123 16123 7787 0 VGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVK VGTQSAGKVGEDEDGS SLPEVEVKSGEEDEEI K V G V K S 0 0 1 4 0 0 8 2 2 2 1 1 0 1 2 2 0 0 0 6 0 0 32 0 3589.6584 P49792 P49792 2893 2924 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 3 0.0009636 51.557 By MS/MS By matching 1 1 24985000 21790000 3195500 7010 1730 7835 17716;17717 16124 16124 3267 1 VGEEEHVYSFPNK SVGSPCSRVGEEEHVY HVYSFPNKQKSAEPSP R V G N K Q 0 0 1 0 0 0 3 1 1 0 0 1 0 1 1 1 0 0 1 2 0 0 13 0 1533.71 F5GZ78;A0A1B0GTU4;P49023;F5H836;A0A1B0GU60 F5GZ78 109 121 PXN Paxillin yes no 3 0.00063749 93.839 By MS/MS By MS/MS 1 1 12290000 6138700 6151300 7011 367 7836 17718;17719 16125;16126 16126 687 2 VGEEEHVYSFPNKQK SVGSPCSRVGEEEHVY YSFPNKQKSAEPSPTV R V G Q K S 0 0 1 0 0 1 3 1 1 0 0 2 0 1 1 1 0 0 1 2 0 0 15 1 1789.8635 F5GZ78;A0A1B0GTU4;P49023;F5H836;A0A1B0GU60 F5GZ78 109 123 PXN Paxillin yes no 3 0.00023904 87.157 By MS/MS By MS/MS 1 1 23468000 14001000 9467600 7012 367 7837 17720;17721 16127;16128 16128 687 2 VGEVIVTK VQPHDLGKVGEVIVTK VGEVIVTKDDAMLLKG K V G T K D 0 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 3 0 0 8 0 843.50657 P10809 P10809 345 352 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.012434 98.458 By matching By MS/MS 1 1 3463300 1677100 1786100 7013 1557 7838 17722;17723 16129 16129 1 VGFQYEGTYK EADELMKRVGFQYEGT FQYEGTYKWVNPHKL_ R V G Y K W 0 0 0 0 0 1 1 2 0 0 0 1 0 1 0 0 1 0 2 1 0 0 10 0 1190.5608 P11413 P11413 499 508 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 2 0.00090067 102.62 By MS/MS By MS/MS 1 1 5872200 3533700 2338400 7014 1566 7839 17724;17725 16130;16131 16131 7563 2 VGGSDEEASGIPSR LEGMKKARVGGSDEEA EASGIPSRTASLELGE R V G S R T 1 1 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 14 0 1359.6266 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53 303 316 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2;3 2.5144E-201 255.39 By MS/MS By MS/MS 2 2 655780000 352890000 302890000 7015 255 7840 17726;17727;17728;17729 16132;16133;16134 16134 462 3 VGGSIRPWK LVTDKGKRVGGSIRPW GGSIRPWKQMYVVLRG R V G W K Q 0 1 0 0 0 0 0 2 0 1 0 1 0 0 1 1 0 1 0 1 0 0 9 1 998.56615 Q5T5U3;E7ESW5;F8W9U9;A0A1B0GV73;A0A1B0GTZ9 Q5T5U3 950 958 ARHGAP21 Rho GTPase-activating protein 21 yes no 2 0.030294 63.694 By MS/MS By matching 1 1 2516300 1357600 1158700 7016 2098 7841 17730;17731 16135 16135 1 VGGSSVDLHR YGPQPQVRVGGSSVDL GSSVDLHRFHPEPYGL R V G H R F 0 1 0 1 0 0 0 2 1 0 1 0 0 0 0 2 0 0 0 2 0 0 10 0 1025.5254 C9JZR2;O60716;E9PRE2 C9JZR2 265 274 CTNND1 Catenin delta-1 yes no 2 0.00017393 113.38 By MS/MS By MS/MS 2 2 30419000 15396000 15023000 7017 624 7842 17732;17733;17734;17735 16136;16137;16138 16136 1139;1140 3 VGGTSDVEVNEK SDGVAVLKVGGTSDVE SDVEVNEKKDRVTDAL K V G E K K 0 0 1 1 0 0 2 2 0 0 0 1 0 0 0 1 1 0 0 3 0 0 12 0 1232.5885 P10809 P10809 406 417 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0023211 98.04 By MS/MS By MS/MS 1 1 5437400 2472500 2964900 7018 1557 7843 17736;17737 16139;16140;16141 16141 3 VGHMSSVELDDELLDPDMDPPHPFPK SPRSALFRVGHMSSVE DPPHPFPKEIPHNEKL R V G P K E 0 0 0 5 0 0 2 1 2 0 3 1 2 1 5 2 0 0 0 2 0 0 26 0 2916.331 H3BNG8;P51798 H3BNG8 21 46 CLCN7 H(+)/Cl(-) exchange transporter 7 yes no 3 0.00222 51.301 By MS/MS By matching 2 1 9933300 8047400 1885900 7019 1119 7844;7845 17738;17739;17740 16142;16143;16144 16142 131;132 2044;2045 3 VGKLSENSSEIK YKCSSSNKVGKLSENS SENSSEIKKGRITPSQ K V G I K K 0 0 1 0 0 0 2 1 0 1 1 2 0 0 0 3 0 0 0 1 0 0 12 1 1289.6827 C9JJN9;Q8N3P4 C9JJN9 1315 1326 VPS8 Vacuolar protein sorting-associated protein 8 homolog yes no 3 0.01979 48.188 By MS/MS 1 880140 880140 0 7020 595 7846 17741 16145 16145 1085;1086 0 VGKLTSPGALLFQ HLNKALWKVGKLTSPG SPGALLFQ________ K V G F Q - 1 0 0 0 0 1 0 2 0 0 3 1 0 1 1 1 1 0 0 1 0 0 13 1 1329.7656 O60566 O60566 1038 1050 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 2 0.010197 101.62 By MS/MS By matching 1 1 3833800 2207300 1626500 7021 1413 7847 17742;17743 16146 16146 6623 1 VGKNSLR V G L R 0 1 1 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 1 0 0 7 1 772.45554 REV__O95568 yes yes 2 0.021362 93.143 By MS/MS 1 6171800 6171800 0 + 7022 2983 7848 17744 16147 16147 6171 1 VGLQVVAVK TLVLNRLKVGLQVVAV GLQVVAVKAPGFGDNR K V G V K A 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 4 0 0 9 0 911.5804 P10809 P10809 293 301 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.00063247 154.01 By MS/MS By MS/MS 1 1 5216700 3085100 2131600 7023 1557 7849 17745;17746 16148;16149 16148 2 VGLSPDSPAGDRNSVGSEGSVGSIR LTYSQLPRVGLSPDSP EGSVGSIRSAGSGQSS R V G I R S 1 2 1 2 0 0 1 5 0 1 1 0 0 0 2 6 0 0 0 3 0 0 25 1 2399.1677 Q8WXE0 Q8WXE0 390 414 CASKIN2 Caskin-2 yes yes 3 0.008762 46.982 By MS/MS By MS/MS 1 1 22492000 12070000 10422000 7024 2412 7850 17747;17748 16150;16151 16150 4842;4843 2 VGNESPVQELK ETENTAYKVGNESPVQ ESPVQELKQDVSKKII K V G L K Q 0 0 1 0 0 1 2 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 11 0 1198.6194 Q5JSH3 Q5JSH3 46 56 WDR44 WD repeat-containing protein 44 yes yes 2 3.4497E-14 166.24 By MS/MS By MS/MS 1 1 87979000 45776000 42203000 7025 2073 7851 17749;17750 16152;16153 16153 4077 2 VGQGYVYEAAQPEQDEYDIPR AKVVVPTRVGQGYVYE QDEYDIPRHLLAPGPQ R V G P R H 2 1 0 2 0 3 3 2 0 1 0 0 0 0 2 0 0 0 3 2 0 0 21 0 2426.1026 P56945;H3BN62 P56945 218 238 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 2 0.00077142 68.044 By MS/MS By MS/MS 1 1 11964000 6305500 5658800 7026 1779 7852 17751;17752 16154;16155;16156 16154 7651 3 VGSDPVLMR NVNGRHSRVGSDPVLM GSDPVLMRKHRRHDLP R V G M R K 0 1 0 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 0 2 0 0 9 0 972.50625 Q68CY2;B5MC15;Q13191 Q68CY2 15 23 DKFZp779A0729;CBLB E3 ubiquitin-protein ligase CBL-B yes no 2 0.0029517 111.27 By MS/MS By MS/MS 1 1 7310700 4309000 3001700 7027 503 7853 17753;17754 16157;16158 16157 943 2 VGSGSLDNLGR RAEEIESRVGSGSLDN GSLDNLGRFRSMSSIP R V G G R F 0 1 1 1 0 0 0 3 0 0 2 0 0 0 0 2 0 0 0 1 0 0 11 0 1073.5465 Q13136;H0YDW2 Q13136 664 674 PPFIA1 Liprin-alpha-1 yes no 2 0.0012589 99.732 By MS/MS By MS/MS 1 1 6048100 3435300 2612800 7028 1899 7854 17755;17756 16159;16160 16160 3628 2 VGSLDNVGHLPAGGAVK FKEKAQAKVGSLDNVG LPAGGAVKTEGGGSEA K V G V K T 2 0 1 1 0 0 0 4 1 0 2 1 0 0 1 1 0 0 0 3 0 0 17 0 1589.8526 E7EVA0;P27816;H0Y2V1;F8W9U4;H7C4C5 E7EVA0 2216 2232 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 1.0546E-45 173.77 By MS/MS By MS/MS 2 2 237980000 136320000 101660000 7029 742 7855 17757;17758;17759;17760 16161;16162;16163;16164 16164 1352 4 VGSLPLEKGSPVTTTK AEAIPEGKVGSLPLEK GSPVTTTKADPRASGK K V G T K A 0 0 0 0 0 0 1 2 0 0 2 2 0 0 2 2 3 0 0 2 0 0 16 1 1612.9036 Q7Z2K8 Q7Z2K8 606 621 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 2;3 5.1159E-06 112.96 By MS/MS By MS/MS 2 2 22476000 11935000 10541000 7030 2206 7856 17761;17762;17763;17764 16165;16166;16167;16168 16166 4397 4 VGSLTPPSSPK PPAVQGQKVGSLTPPS LTPPSSPKTQRAGHRR K V G P K T 0 0 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 1 0 0 11 0 1068.5815 Q2M2I8;E9PG46 Q2M2I8 616 626 AAK1 AP2-associated protein kinase 1 yes no 2 1.2349E-05 141.34 By MS/MS By MS/MS 1 1 43928000 25825000 18102000 7031 2030 7857 17765;17766 16169;16170;16171 16171 3968;6852 3 VGSLTPPSSPKTQR PPAVQGQKVGSLTPPS PSSPKTQRAGHRRILS K V G Q R A 0 1 0 0 0 1 0 1 0 0 1 1 0 0 3 3 2 0 0 1 0 0 14 1 1453.7889 Q2M2I8;E9PG46 Q2M2I8 616 629 AAK1 AP2-associated protein kinase 1 yes no 2 0.0011644 107.11 By MS/MS By MS/MS 1 1 45352000 23226000 22126000 7032 2030 7858 17767;17768 16172;16173;16174;16175 16173 3968;6852 4 VGSPATVTFQQNK TKMVLTTKVGSPATVT TVTFQQNKNFHQTFAT K V G N K N 1 0 1 0 0 2 0 1 0 0 0 1 0 1 1 1 2 0 0 2 0 0 13 0 1375.7096 F5GXF5;E7ETD6;Q12830;J3QQK4 F5GXF5 2033 2045 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.005084 72.848 By matching By MS/MS 1 1 7459500 3840600 3618900 7033 736 7859 17769;17770 16176 16176 1324 1 VGSPLDYSLVDLPSTNGQSPGK EDFENVGKVGSPLDYS TNGQSPGKAIENLIGK K V G G K A 0 0 1 2 0 1 0 3 0 0 3 1 0 0 3 4 1 0 1 2 0 0 22 0 2230.1117 Q96T23 Q96T23 1357 1378 RSF1 Remodeling and spacing factor 1 yes yes 2 1.137E-11 110.91 By MS/MS By matching 3 2 20128000 13972000 6156300 7034 2544 7860;7861;7862 17771;17772;17773;17774;17775 16177;16178;16179 16177 5140;5141 2 VGSPLTLTDAQTR PQYQTTARVGSPLTLT TLTDAQTRVASPSQGQ R V G T R V 1 1 0 1 0 1 0 1 0 0 2 0 0 0 1 1 3 0 0 1 0 0 13 0 1357.7201 A0A0D9SF60;Q99569 Q99569 312 324 PKP4 Plakophilin-4 no no 2 0.00090759 105.95 By MS/MS By MS/MS 1 1 50474000 28904000 21570000 7035 314;2552 7863 17776;17777 16180;16181 16181 573 2 VGSPQPSSSGGEKR AFQEVSIRVGSPQPSS SSSGGEKRRWNEEPWE R V G K R R 0 1 0 0 0 1 1 3 0 0 0 1 0 0 2 4 0 0 0 1 0 0 14 1 1371.6743 V9GYB6;A0A087WZ30;O94761 O94761 90 103 RECQL4 ATP-dependent DNA helicase Q4 no no 2 0.007328 74.475 By MS/MS By matching 1 1 5545300 2286500 3258800 7036 107;1458 7864 17778;17779 16182 16182 199 1 VGSTENIK DLKNVRSKVGSTENIK VGSTENIKHQPGGGRA K V G I K H 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 1 1 0 0 1 0 0 8 0 846.4447 E7EVA0;P27816;H0Y2V1;F8W9U4;H7C4C5 E7EVA0 2084 2091 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 1;2 0.0086815 79.489 By MS/MS By MS/MS 2 3 17323000 7879700 9443000 7037 742 7865 17780;17781;17782;17783;17784 16183;16184;16185;16186;16187 16185 1348 5 VGTEGLVDSFSQGLER ________________ SFSQGLERSYAVSSSV R V G E R S 0 1 0 1 0 1 2 3 0 0 2 0 0 1 0 2 1 0 0 2 0 0 16 0 1692.8319 T1ECW5;O75170 T1ECW5 7 22 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 2 0.0030307 67.326 By matching By MS/MS 1 1 5278800 2855300 2423500 7038 3013 7866 17785;17786 16188 16188 6208;6209 1 VGTIDDDPEYR KTKKRDTKVGTIDDDP IDDDPEYRKFLESYAT K V G Y R K 0 1 0 3 0 0 1 1 0 1 0 0 0 0 1 0 1 0 1 1 0 0 11 0 1278.5728 Q9BZI7;A0A087WYC8 Q9BZI7 151 161 UPF3B Regulator of nonsense transcripts 3B yes no 2 0.00060585 101.97 By MS/MS By MS/MS 1 1 12346000 6109300 6236600 7039 2610 7867 17787;17788 16189;16190 16189 7880 2 VGTNDQYLSR V G S R 0 1 1 1 0 1 0 1 0 0 1 0 0 0 0 1 1 0 1 1 0 0 10 0 1151.5571 REV__B4DT68 yes no 2 0.012493 77.744 By matching By MS/MS 1 1 16117000 8377900 7739400 + 7040 2961 7868 17789;17790 16191 16191 6147 1 VGVEASEETPQTSSSSARPGTPSDHQSQEASQFER KEGEKTDRVGVEASEE QEASQFERKDEPKTEQ R V G E R K 3 2 0 1 0 4 5 2 1 0 0 0 0 1 3 8 3 0 0 2 0 0 35 1 3702.663 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1 I1E4Y6 384 418 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 4 0.00032123 50.413 By MS/MS By MS/MS 1 1 75860000 34558000 41302000 7041 1194 7869 17791;17792 16192;16193 16192 2173;6555 2 VGVNGFGR ________________ VGVNGFGRIGRLVTRA K V G G R I 0 1 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 0 804.42424 P04406 P04406 6 13 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 0.013421 128.82 By MS/MS By MS/MS 3 4 21590000 12197000 9393300 7042 1522 7870;7871 17793;17794;17795;17796;17797;17798;17799 16194;16195;16196;16197;16198;16199;16200;16201 16198 8 VHAYFAPVTPPPSVGGSR RTHLPNIKVHAYFAPV PPSVGGSRQRFCRCCI K V H S R Q 2 1 0 0 0 0 0 2 1 0 0 0 0 1 4 2 1 0 1 3 0 0 18 0 1837.9475 J3KTA1;Q96IG2 J3KTA1 411 428 FBXL20 F-box/LRR-repeat protein 20 yes no 2;3 0.013822 60.561 By matching By MS/MS 1 2 5900800 696400 5204400 7043 1245 7872 17800;17801;17802 16202;16203 16202 2256 1 VHGEPTSDLSDID RAMNHLSRVHGEPTSD TSDLSDID________ R V H I D - 0 0 0 3 0 0 1 1 1 1 1 0 0 0 1 2 1 0 0 1 0 0 13 0 1383.6154 O95696 O95696 1046 1058 BRD1 Bromodomain-containing protein 1 yes yes 2 2.577E-12 152.64 By MS/MS By MS/MS 3 3 135800000 74609000 61191000 7044 1498 7873;7874 17803;17804;17805;17806;17807;17808 16204;16205;16206;16207;16208;16209 16205 2780;2781;6649 6 VHRPRSPILEEK TPGRRKPRVHRPRSPI RSPILEEKDIPPLEFP R V H E K D 0 2 0 0 0 0 2 0 1 1 1 1 0 0 2 1 0 0 0 1 0 0 12 2 1459.8259 F5GXF5;E7ETD6;Q12830;A0A0A0MR81 F5GXF5 211 222 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 0.027015 54.094 By matching By MS/MS 1 1 9227600 3289500 5938100 7045 736 7875 17809;17810 16210 16210 1 VHSEAISPAPEEK IVHAVGERVHSEAISP ISPAPEEKAVTLRSLR R V H E K A 2 0 0 0 0 0 3 0 1 1 0 1 0 0 2 2 0 0 0 1 0 0 13 0 1392.6885 Q9BY89 Q9BY89 743 755 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.00068771 107.74 By MS/MS By MS/MS 1 1 6036300 2459200 3577200 7046 2604 7876 17811;17812 16211;16212 16212 5275 2 VHSENNACINFK KPANQVKRVHSENNAC NNACINFKTSSTGKES R V H F K T 1 0 3 0 1 0 1 0 1 1 0 1 0 1 0 1 0 0 0 1 0 0 12 0 1431.6565 C9JWL6;F8WF96;C9IYJ9;O94921 C9JWL6 47 58 CDK14 Cyclin-dependent kinase 14 yes no 2 0.0011981 99.732 By MS/MS By MS/MS 1 1 6702700 3808700 2894000 7047 541 7877 17813;17814 16213;16214 16213 990 2 VHVQFFDDSPTR REKGKSVRVHVQFFDD FFDDSPTRGWVSKRLL R V H T R G 0 1 0 2 0 1 0 0 1 0 0 0 0 2 1 1 1 0 0 2 0 0 12 0 1446.6892 P52701;F8WAX8;A0A087WWJ1;U3KQ72;C9JH55;C9J8Y8;C9J7Y7 P52701 129 140 MSH6 DNA mismatch repair protein Msh6 yes no 2;3 9.5592E-07 122.46 By MS/MS By MS/MS 2 2 43560000 21969000 21591000 7048 1754 7878 17815;17816;17817;17818 16215;16216;16217;16218 16217 3314 4 VIATYQNIAVYEWLPSFLQK LFQHARKRVIATYQNI WLPSFLQKTLPEYTGY R V I Q K T 2 0 1 0 0 2 1 0 0 2 2 1 0 1 1 1 1 1 2 2 0 0 20 0 2382.2624 H0YK19;X6RAN8;Q9NRD8;Q9NRD9 H0YK19 283 302 DUOX1;DUOX2 Dual oxidase 2;Dual oxidase 1 yes no 3 0.018665 40.515 By MS/MS 1 4230400 4230400 0 7049 1086 7879 17819 16219 16219 2002;7450;7451 1 VIAVYDLGGGTFDISILEIQK GLDKSEDKVIAVYDLG ISILEIQKGVFEVKST K V I Q K G 1 0 0 2 0 1 1 3 0 4 2 1 0 1 0 1 1 0 1 2 0 0 21 0 2250.2148 P38646 P38646 239 259 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0014215 71.529 By matching By MS/MS 1 1 7037800 4051200 2986600 7050 1680 7880 17820;17821 16220 16220 1 VIDPATATSVDLR MSVNAVMKVIDPATAT TATSVDLRDIKIVKKL K V I L R D 2 1 0 2 0 0 0 0 0 1 1 0 0 0 1 1 2 0 0 2 0 0 13 0 1356.7249 P50991 P50991 194 206 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0023776 94.616 By MS/MS By MS/MS 1 1 4443700 1817500 2626100 7051 1742 7881 17822;17823 16221;16222 16222 2 VIEDDPEAVYTTTGGKIPVR VSDFGLSRVIEDDPEA TGGKIPVRWTAPEAIQ R V I V R W 1 1 0 2 0 0 2 2 0 2 0 1 0 0 2 0 3 0 1 3 0 0 20 1 2159.111 Q15375 Q15375 782 801 EPHA7 Ephrin type-A receptor 7 yes yes 2;3 1.4503E-08 92.096 By MS/MS By matching 2 2 32515000 18799000 13715000 7052 1986 7882 17824;17825;17826;17827 16223;16224 16223 7713 1 VIEDNEYTAR IADFGLARVIEDNEYT EDNEYTAREGAKFPIK R V I A R E 1 1 1 1 0 0 2 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 10 0 1208.5673 P07948;H0Y3C5;J3KPD6;P08631 P07948 391 400 LYN;HCK Tyrosine-protein kinase Lyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase HCK yes no 2 1.6151E-05 135.71 By MS/MS By MS/MS 1 1 47443000 23013000 24430000 7053 1541 7883 17828;17829 16225;16226;16227 16225 6660;7553 3 VIEDNEYTAREGAK IADFGLARVIEDNEYT YTAREGAKFPIKWTAP R V I A K F 2 1 1 1 0 0 3 1 0 1 0 1 0 0 0 0 1 0 1 1 0 0 14 1 1593.7635 P07948;H0Y3C5;J3KPD6;P08631 P07948 391 404 LYN;HCK Tyrosine-protein kinase Lyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase HCK yes no 2;3 5.9741E-14 138.42 By MS/MS By MS/MS 2 2 21798000 11094000 10704000 7054 1541 7884 17830;17831;17832;17833 16228;16229;16230;16231 16231 6660;7553 4 VIEEEWQQVDR PFHESILKVIEEEWQQ EEWQQVDRQLPSLACK K V I D R Q 0 1 0 1 0 2 3 0 0 1 0 0 0 0 0 0 0 1 0 2 0 0 11 0 1429.6838 P42166 P42166 501 511 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.0024894 98.048 By MS/MS By MS/MS 1 1 901660 901660 0 7055 1695 7885 17834;17835 16232;16233 16232 2 VIETPENDFK RVNCRREKVIETPEND ETPENDFKHHRSQNHS K V I F K H 0 0 1 1 0 0 2 0 0 1 0 1 0 1 1 0 1 0 0 1 0 0 10 0 1190.5819 Q9H0G5;A0A024QZ33 Q9H0G5 272 281 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 yes no 2 0.010128 89.805 By MS/MS By MS/MS 1 1 5464700 2893300 2571400 7056 2627 7886 17836;17837 16234;16235 16234 7041 2 VIGGDDLSTLTGK DQSTGDIKVIGGDDLS DLSTLTGKNVLIVEDI K V I G K N 0 0 0 2 0 0 0 3 0 1 2 1 0 0 0 1 2 0 0 1 0 0 13 0 1274.6718 P00492 P00492 116 128 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.0010045 108.7 By MS/MS By MS/MS 1 1 5723500 3248200 2475300 7057 1510 7887 17838;17839 16236;16237 16236 2 VIGSGCNLDSAR LSGLPKHRVIGSGCNL GCNLDSARFRYLMAEK R V I A R F 1 1 1 1 1 0 0 2 0 1 1 0 0 0 0 2 0 0 0 1 0 0 12 0 1247.5928 P00338;F5H5G7;F5H155;A0A087WUM2;G3XAP5;F5H245;Q6ZMR3;P07864;P07195;A8MW50 P07195 159 170 LDHA;LDHC;LDHAL6A;LDHB L-lactate dehydrogenase A chain;L-lactate dehydrogenase;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase B chain no no 2 0.00029856 112.71 By MS/MS By MS/MS 1 1 39115000 19121000 19995000 7058 1535;1509 7888 17840;17841 16238;16239 16239 2 VIILQGSK NNIERVEKVIILQGSK VIILQGSKSVELKKKV K V I S K S 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 1 0 0 0 1 0 0 8 0 856.5382 Q495X7 Q495X7 161 168 TRIM60 Tripartite motif-containing protein 60 yes yes 2 0.029785 63.534 By MS/MS By matching 1 1 22045000 14097000 7947900 7059 2043 7889 17842;17843 16240 16240 1 VIKDEALSDGDDLR TVKSENLKVIKDEALS LSDGDDLRDFPSDLKK K V I L R D 1 1 0 4 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 1 0 0 14 1 1544.7682 Q01831;E7EUB5 Q01831 87 100 XPC DNA repair protein complementing XP-C cells yes no 2 0.0010647 97.214 By MS/MS By matching 1 1 18136000 9352000 8784300 7060 1834 7890 17844;17845 16241 16241 3435 1 VIKDEALSDGDDLRDFPSDLK TVKSENLKVIKDEALS RDFPSDLKKAHHLKRG K V I L K K 1 1 0 6 0 0 1 1 0 1 3 2 0 1 1 2 0 0 0 1 0 0 21 2 2347.1543 Q01831;E7EUB5 Q01831 87 107 XPC DNA repair protein complementing XP-C cells yes no 3 0.027561 43.115 By matching By MS/MS 1 1 21786000 13329000 8456600 7061 1834 7891 17846;17847 16242 16242 3435 0 VILASPETSSAK PDGAGTGKVILASPET SPETSSAKQLIFTTSD K V I A K Q 2 0 0 0 0 0 1 0 0 1 1 1 0 0 1 3 1 0 0 1 0 0 12 0 1201.6554 P49116;C9JKS0 P49116 64 75 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.0060499 73.36 By MS/MS By MS/MS 1 1 8492300 4508200 3984100 7062 1722 7892 17848;17849 16243;16244 16243 3227 2 VIPELNGK GAAKAVGKVIPELNGK VIPELNGKLTGMAFRV K V I G K L 0 0 1 0 0 0 1 1 0 1 1 1 0 0 1 0 0 0 0 1 0 0 8 0 868.50182 P04406;E7EUT5 P04406 220 227 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.01272 97.602 By MS/MS By MS/MS 2 3 17148000 8516100 8632200 7063 1522 7893;7894 17850;17851;17852;17853;17854 16245;16246;16247 16245 3 VIQPMGMSPR APFPNRNRVIQPMGMS QPMGMSPRGHLTSLQD R V I P R G 0 1 0 0 0 1 0 1 0 1 0 0 2 0 2 1 0 0 0 1 0 0 10 0 1114.5627 H0YE35;Q9NPQ8 H0YE35 111 120 RIC8A Synembryn-A yes no 2 0.001602 101.56 By MS/MS By MS/MS 2 3 38463000 17546000 20917000 7064 1067 7895;7896 17855;17856;17857;17858;17859 16248;16249;16250 16248 1971 3 VISGTTLGYLSPK EMEASRHKVISGTTLG TLGYLSPKDMNQPSSS K V I P K D 0 0 0 0 0 0 0 2 0 1 2 1 0 0 1 2 2 0 1 1 0 0 13 0 1334.7446 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 43 55 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 2 0.0011903 103.66 By MS/MS By MS/MS 1 1 13850000 8752800 5097400 7065 242 7897 17860;17861 16251;16252 16251 440 2 VISRPPPSVSPPK PSLRSPPRVISRPPPS PPSVSPPKCIQMERHV R V I P K C 0 1 0 0 0 0 0 0 0 1 0 1 0 0 5 3 0 0 0 2 0 0 13 1 1359.7874 A0A0C4DGG3;Q8NHM5 A0A0C4DGG3 390 402 KDM2B Lysine-specific demethylase 2B yes no 3 0.0011905 84.41 By MS/MS By MS/MS 2 2 15740000 6986800 8752900 7066 291 7898 17862;17863;17864;17865 16253;16254;16255 16253 518;519 3 VITEEMNGKEISPGSGPGEIR AEVGKDERVITEEMNG GSGPGEIRKVEPVTQK R V I I R K 0 1 1 0 0 0 4 4 0 3 0 1 1 0 2 2 1 0 0 1 0 0 21 1 2199.0841 O43491;E9PK52;E9PHY5;H0Y5B0;E9PMV8;Q6R5J7;E9PMG5 O43491 704 724 EPB41L2 Band 4.1-like protein 2 yes no 3 0.001444 62.193 By MS/MS By MS/MS 2 2 37307000 18932000 18375000 7067 1387 7899;7900 17866;17867;17868;17869 16256;16257;16258 16257 2536;2537 3 VITNQYNNPAGLYSSENISNFNNALESK PASSTTARVITNQYNN FNNALESKTAASGVEA R V I S K T 2 0 7 0 0 1 2 1 0 2 2 1 0 1 1 4 1 0 2 1 0 0 28 0 3100.4738 O00151 O00151 139 166 PDLIM1 PDZ and LIM domain protein 1 yes yes 3 1.0365E-06 75.703 By MS/MS By MS/MS 1 1 142650000 71732000 70916000 7068 1321 7901 17870;17871 16259;16260 16260 2379;2380 2 VIYDFIEK LKDRETSKVIYDFIEK VIYDFIEKTGGVEAVK K V I E K T 0 0 0 1 0 0 1 0 0 2 0 1 0 1 0 0 0 0 1 1 0 0 8 0 1025.5433 O00401 O00401 254 261 WASL Neural Wiskott-Aldrich syndrome protein yes yes 2 0.0038079 134.81 By MS/MS By MS/MS 1 1 73022000 37679000 35343000 7069 1331 7902 17872;17873 16261;16262 16261 7498 2 VIYSQPSAR KKGTSSKKVIYSQPSA IYSQPSARSEGEFKQT K V I A R S 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 2 0 0 1 1 0 0 9 0 1019.54 A0A087WY82;Q9Y624 A0A087WY82 258 266 F11R Junctional adhesion molecule A yes no 2 0.00067613 149.82 By MS/MS By MS/MS 1 1 14276000 7572000 6704100 7070 96 7903 17874;17875 16263;16264;16265;16266 16264 178;7165 4 VIYSQPSARSEGEFK KKGTSSKKVIYSQPSA ARSEGEFKQTSSFLV_ K V I F K Q 1 1 0 0 0 1 2 1 0 1 0 1 0 1 1 3 0 0 1 1 0 0 15 1 1696.842 A0A087WY82;Q9Y624 A0A087WY82 258 272 F11R Junctional adhesion molecule A yes no 2;3 0.0033241 76.156 By MS/MS By MS/MS 4 4 31147000 18536000 12612000 7071 96 7904;7905 17876;17877;17878;17879;17880;17881;17882;17883 16267;16268;16269;16270;16271 16270 178;180;7165 5 VKALPLSPR QTVTCSPRVKALPLSP KALPLSPRKRLGDDNL R V K P R K 1 1 0 0 0 0 0 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 9 1 979.61785 J3QR52;J3QLN7;Q99741;J3KTI7 J3QR52 48 56 CDC6 Cell division control protein 6 homolog yes no 2 0.010659 77.124 By MS/MS By matching 1 1 8435200 4691800 3743400 7072 1250 7906 17884;17885 16272 16272 2263 1 VKAPVHFVEPLSPTGVAGHR KNNSQDHKVKAPVHFV PTGVAGHRKAPRLGQG K V K H R K 2 1 0 0 0 0 1 2 2 0 1 1 0 1 3 1 1 0 0 4 0 0 20 1 2097.1483 Q5T5Y3 Q5T5Y3 1069 1088 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 3;4 0.00025232 74.308 By MS/MS By MS/MS 2 2 11388000 6257300 5130600 7073 2099 7907 17886;17887;17888;17889 16273;16274 16274 4154 2 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK NNDLEELKVKASPITN EYTFSPGKSKATPEKS K V K G K S 1 0 1 5 0 0 3 3 0 1 1 3 0 2 3 3 2 0 1 2 0 0 31 2 3356.5572 Q02880 Q02880 1397 1427 TOP2B DNA topoisomerase 2-beta yes yes 3 0.022836 42.885 By MS/MS By matching 1 1 38745000 20290000 18454000 7074 1842 7908 17890;17891 16275 16275 3445 1 VKEGYVPQEEVPVYENKYVK GTWRKQRRVKEGYVPQ VYENKYVKFFKSKPEL R V K V K F 0 0 1 0 0 1 4 1 0 0 0 3 0 0 2 0 0 0 3 5 0 0 20 2 2396.2264 Q9BRP8 Q9BRP8 32 51 WIBG Partner of Y14 and mago yes yes 3 0.0024627 56.819 By matching By MS/MS 1 1 8997100 5503400 3493700 7075 2572 7909 17892;17893 16276 16276 7869 1 VKESSIIAPAPAEDVDTPPR CRQVYEFRVKESSIIA EDVDTPPRKKKRKHRL R V K P R K 3 1 0 2 0 0 2 0 0 2 0 1 0 0 4 2 1 0 0 2 0 0 20 1 2091.0848 Q15910 Q15910 471 490 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 3 0.0048461 56.468 By MS/MS By MS/MS 1 2 45233000 21596000 23637000 7076 2013 7910 17894;17895;17896 16277;16278 16278 6837 2 VKLNFDMTASPK AKIDKQEKVKLNFDMT FDMTASPKILMSKPVL K V K P K I 1 0 1 1 0 0 0 0 0 0 1 2 1 1 1 1 1 0 0 1 0 0 12 1 1349.7013 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 324 335 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.028696 42.718 By MS/MS By matching 1 1 3735100 2739000 996180 7077 69 7911 17897;17898 16279 16279 119 0 VKMPEQEYEFPEPR LEKAKNARVKMPEQEY EYEFPEPRNLNNNMRR R V K P R N 0 1 0 0 0 1 4 0 0 0 0 1 1 1 3 0 0 0 1 1 0 0 14 1 1777.8345 Q9H6X2 Q9H6X2 418 431 ANTXR1 Anthrax toxin receptor 1 yes yes 2;3 0.00083462 81.128 By MS/MS By MS/MS 2 2 33570000 18628000 14943000 7078 2671 7912 17899;17900;17901;17902 16280;16281;16282 16280 7891 3 VKPASPVAQPK SQGKTEVKVKPASPVA ASPVAQPKEEAKTETE K V K P K E 2 0 0 0 0 1 0 0 0 0 0 2 0 0 3 1 0 0 0 2 0 0 11 1 1120.6604 Q96EV2;H0Y3K4 Q96EV2 761 771 RBM33 RNA-binding protein 33 yes no 2 0.0063429 76.24 By MS/MS By MS/MS 1 1 20355000 7375100 12980000 7079 2480 7913 17903;17904 16283;16284 16283 5004 2 VKSPVSLTAHSLIGASPK MNTNQESKVKSPVSLT SLIGASPKQTNLTKAQ K V K P K Q 2 0 0 0 0 0 0 1 1 1 2 2 0 0 2 4 1 0 0 2 0 0 18 1 1791.0254 P28749 P28749 747 764 RBL1 Retinoblastoma-like protein 1 yes yes 3 8.0676E-06 85.798 By MS/MS By MS/MS 2 2 19996000 11573000 8423100 7080 1643 7914;7915 17905;17906;17907;17908 16285;16286;16287 16287 3034;3035 3 VLAETPDSFEK EVAESPLRVLAETPDS ETPDSFEKHIRSILQR R V L E K H 1 0 0 1 0 0 2 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 11 0 1234.6081 J3KMX1;Q99567 J3KMX1 460 470 NUP88 Nuclear pore complex protein Nup88 yes no 2 0.013862 85.672 By matching By MS/MS 1 1 8410300 4902900 3507400 7081 1218 7916 17909;17910 16288 16288 1 VLAGETLSVNDPPDVLDR VVREEMEKVLAGETLS DPPDVLDRQKCLAALA K V L D R Q 1 1 1 3 0 0 1 1 0 0 3 0 0 0 2 1 1 0 0 3 0 0 18 0 1908.9793 Q12906;K7EKJ9;K7EQR9 Q12906 183 200 ILF3 Interleukin enhancer-binding factor 3 yes no 2 1.9641E-05 96.059 By matching By MS/MS 1 1 7566000 3986800 3579100 7082 1884 7917 17911;17912 16289 16289 1 VLAPILPDNFSTPTGSR PDSPWRERVLAPILPD FSTPTGSRTDSQSVRH R V L S R T 1 1 1 1 0 0 0 1 0 1 2 0 0 1 3 2 2 0 0 1 0 0 17 0 1783.9468 Q9NQS7 Q9NQS7 281 297 INCENP Inner centromere protein yes yes 2 0.0072266 60.209 By MS/MS By MS/MS 1 1 6943700 4161600 2782100 7083 2712 7918 17913;17914 16290;16291 16290 5534;7059 2 VLASNPIMESIGNAKTTR SEANVEEKVLASNPIM IGNAKTTRNDNSSRFG K V L T R N 2 1 2 0 0 0 1 1 0 2 1 1 1 0 1 2 2 0 0 1 0 0 18 1 1901.004 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1 A0A087WY00 196 213 MYO5A Unconventional myosin-Va yes no 2 0.0079642 52.928 By MS/MS By matching 1 1 3756500 2289700 1466800 7084 93 7919 17915;17916 16292 16292 10 6237;6238 1 VLDDVSIRSPETK NKLYPKDRVLDDVSIR SIRSPETKCPKQNSIE R V L T K C 0 1 0 2 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 2 0 0 13 1 1457.7726 F5GXF5;E7ETD6;Q12830 F5GXF5 1229 1241 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.010966 72.321 By MS/MS By MS/MS 1 1 10082000 5786100 4296000 7085 736 7920 17917;17918 16293;16294 16293 1320;1321 0 VLDSSYGITK SEKELNFRVLDSSYGI DSSYGITKSLENIYSE R V L T K S 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 2 1 0 1 1 0 0 10 0 1081.5655 Q68D51 Q68D51 180 189 DENND2C DENN domain-containing protein 2C yes yes 2 3.0877E-05 122.28 By MS/MS By MS/MS 1 1 9002000 4402200 4599800 7086 2133 7921 17919;17920 16295;16296 16296 4245 2 VLDTSSLTQSAPASPTNK TVNARPQRVLDTSSLT APASPTNKGVHIHQAG R V L N K G 2 0 1 1 0 1 0 0 0 0 2 1 0 0 2 4 3 0 0 1 0 0 18 0 1815.9214 Q8N122;I3L436 Q8N122 850 867 RPTOR Regulatory-associated protein of mTOR yes no 2;3 0.00039653 76.158 By MS/MS By MS/MS 2 2 134980000 69604000 65380000 7087 2296 7922 17921;17922;17923;17924 16297;16298;16299 16297 4610 3 VLEDDPEAAYTTR VSDFGLSRVLEDDPEA PEAAYTTRGGKIPIRW R V L T R G 2 1 0 2 0 0 2 0 0 0 1 0 0 0 1 0 2 0 1 1 0 0 13 0 1478.6889 F8W9W0;F8VP57;B7ZKW7;B7ZKJ3;P54756;C9JXA2;P29320;E9PG71;P54764 E9PG71 661 673 EPHA5;EPHA3;EPHA4 Receptor protein-tyrosine kinase;Ephrin type-A receptor 5;Ephrin type-A receptor 3;Ephrin type-A receptor 4 no no 2 1.8179E-21 167.12 By MS/MS By MS/MS 1 1 131400000 71218000 60177000 7088 523;614;788 7923 17925;17926 16300;16301;16302 16302 7305 3 VLEDDPEATYTTSGGK VSDFGLSRVLEDDPEA TYTTSGGKIPIRWTAP R V L G K I 1 0 0 2 0 0 2 2 0 0 1 1 0 0 1 1 3 0 1 1 0 0 16 0 1681.7683 P29317 P29317 763 778 EPHA2 Ephrin type-A receptor 2 yes yes 2 2.1721E-36 171.32 By matching By MS/MS 1 1 9158200 3876700 5281400 7089 1644 7924 17927;17928 16303 16303 7585 1 VLEDEEGSKDIELSDDPYDCIR NTRIPRVRVLEDEEGS DDPYDCIRLSVENVPC R V L I R L 0 1 0 5 1 0 4 1 0 2 2 1 0 0 1 2 0 0 1 1 0 0 22 1 2596.1487 Q15024 Q15024 170 191 EXOSC7 Exosome complex component RRP42 yes yes 3 2.3438E-26 131.18 By MS/MS By MS/MS 1 1 29863000 17416000 12446000 7090 1969 7925 17929;17930 16304;16305 16304 3839 2 VLEEGSVEAR LEENVNRRVLEEGSVE EEGSVEARTIEDAIAV R V L A R T 1 1 0 0 0 0 3 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 10 0 1087.551 Q96CT7 Q96CT7 136 145 CCDC124 Coiled-coil domain-containing protein 124 yes yes 2 0.00018257 112.94 By MS/MS By MS/MS 1 1 3346300 3346300 0 7091 2467 7926 17931;17932 16306;16307 16306 4966 2 VLEGMEVVR GKHVVFGKVLEGMEVV LEGMEVVRKVESTKTD K V L V R K 0 1 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 3 0 0 9 0 1030.5481 P23284 P23284 172 180 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 0.0053088 93.429 By MS/MS 1 1438900 1438900 0 7092 1621 7927 17933 16308 16308 1 VLEILYEFPR GRIETDTKVLEILYEF EILYEFPRVFSSVMKP K V L P R V 0 1 0 0 0 0 2 0 0 1 2 0 0 1 1 0 0 0 1 1 0 0 10 0 1277.702 A0A087X0M0;Q7Z5L2 A0A087X0M0 213 222 R3HCC1L Coiled-coil domain-containing protein R3HCC1L yes no 2 1.7353E-05 135.71 By MS/MS By MS/MS 1 1 15036000 10184000 4852500 7093 130 7928 17934;17935 16309;16310 16310 7178 2 VLEQLTGQTPVFSK DRLTRAAKVLEQLTGQ GQTPVFSKARYTVRSF K V L S K A 0 0 0 0 0 2 1 1 0 0 2 1 0 1 1 1 2 0 0 2 0 0 14 0 1545.8403 P62913;Q5VVC8;Q5VVC9 P62913 39 52 RPL11 60S ribosomal protein L11 yes no 2 2.2904E-07 124.42 By MS/MS By MS/MS 1 1 8018400 5622700 2395600 7094 1805 7929 17936;17937 16311;16312 16312 2 VLESTPNNGYLYHQIGCCYKAKVR KAIELFQRVLESTPNN CCYKAKVRQMQNTGES R V L V R Q 1 1 2 0 2 1 1 2 1 1 2 2 0 0 1 1 1 0 3 2 0 0 24 2 2869.4004 O14879 O14879 267 290 IFIT3 Interferon-induced protein with tetratricopeptide repeats 3 yes yes 3 0.023572 45.611 By MS/MS 1 0 0 0 7095 1347 7930 17938 16313 16313 7512;7513 1 VLEYEMTQFDRR QSNSSQPKVLEYEMTQ EMTQFDRRGPIAKSGT K V L R R G 0 2 0 1 0 1 2 0 0 0 1 0 1 1 0 0 1 0 1 1 0 0 12 1 1585.7559 Q9ULJ7 Q9ULJ7 1296 1307 ANKRD50 Ankyrin repeat domain-containing protein 50 yes yes 3 0.017415 50.284 By MS/MS 1 0 0 0 7096 2848 7931 17939 16314 16314 7943 1 VLFRPSDTANSSNQDALSSNTSLK YVFNHRGRVLFRPSDT LSSNTSLKLRKLESLR R V L L K L 2 1 3 2 0 1 0 0 0 0 3 1 0 1 1 6 2 0 0 1 0 0 24 1 2551.2514 Q8N4V1 Q8N4V1 99 122 MMGT1 Membrane magnesium transporter 1 yes yes 3 0.00069701 58.5 By MS/MS By MS/MS 1 1 12476000 6157300 6318900 7097 2312 7932 17940;17941 16315;16316 16315 4646;4647 2 VLGRSPLTILQDDNSPGTLTLR RWKPNSSKVLGRSPLT SPGTLTLRQGKRPSPL K V L L R Q 0 2 1 2 0 1 0 2 0 1 5 0 0 0 2 2 3 0 0 1 0 0 22 1 2365.2965 Q99618;J3KMY0 Q99618 195 216 CDCA3 Cell division cycle-associated protein 3 yes no 3 9.5316E-09 89.831 By MS/MS By matching 1 1 11055000 8439200 2616000 7098 2555 7933 17942;17943 16317 16317 5167;5168 1 VLGSEGEEEDEALSPAK RPGRKAARVLGSEGEE DEALSPAKGQKPALDC R V L A K G 2 0 0 1 0 0 5 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 17 0 1758.816 M0R0Q7;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 63 79 LIG1 DNA ligase;DNA ligase 1 yes no 2 1.2456E-05 103.88 By MS/MS By MS/MS 3 3 152850000 83830000 69017000 7099 1316 7934;7935 17944;17945;17946;17947;17948;17949 16318;16319;16320;16321;16322;16323;16324 16324 2371;2372 7 VLIAAHGNSLR PQIKEGKRVLIAAHGN AAHGNSLRGIVKHLEG R V L L R G 2 1 1 0 0 0 0 1 1 1 2 0 0 0 0 1 0 0 0 1 0 0 11 0 1149.6618 P18669;P15259 P18669 181 191 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 3 0.0018238 89.171 By MS/MS By MS/MS 1 1 3501500 2135600 1366000 7100 1602 7936 17950;17951 16325;16326 16325 2 VLISVGSYK LEECPIPKVLISVGSY LISVGSYKSSVESVLI K V L Y K S 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 2 0 0 1 2 0 0 9 0 964.55933 Q8TEV9 Q8TEV9 411 419 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein yes yes 2 0.0042969 105.13 By MS/MS By MS/MS 1 1 4675000 2026000 2649000 7101 2392 7937 17952;17953 16327;16328 16328 4783 2 VLITTDLLAR EFRSGSSRVLITTDLL ITTDLLARGIDVQQVS R V L A R G 1 1 0 1 0 0 0 0 0 1 3 0 0 0 0 0 2 0 0 1 0 0 10 0 1113.6758 P60842;E7EQG2;Q14240 P60842 325 334 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.0038799 90.601 By MS/MS By MS/MS 1 1 6147400 3920100 2227400 7102 1786 7938 17954;17955 16329;16330 16329 2 VLKEPVNLEGDDTSLIHGK SVTYKRGRVLKEPVNL DTSLIHGKIPSEMPSP R V L G K I 0 0 1 2 0 0 2 2 1 1 3 2 0 0 1 1 1 0 0 2 0 0 19 1 2063.0899 Q9H2J7 Q9H2J7 662 680 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 3 2.2575E-06 94.259 By MS/MS By MS/MS 1 1 14123000 7911000 6211600 7103 2645 7939 17956;17957 16331;16332 16332 5390;7049 2 VLLGFSSDESDVEASPR AAPAAGSKVLLGFSSD SDVEASPRDQAGGGGR K V L P R D 1 1 0 2 0 0 2 1 0 0 2 0 0 1 1 4 0 0 0 2 0 0 17 0 1806.8636 Q9Y2U8 Q9Y2U8 135 151 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 2.2672E-07 115.38 By MS/MS By MS/MS 2 2 13628000 7271400 6356400 7104 2896 7940;7941 17958;17959;17960;17961 16333;16334;16335 16334 6029 3 VLLSDSNLHDA PAFKPGEKVLLSDSNL SDSNLHDA________ K V L D A - 1 0 1 2 0 0 0 0 1 0 3 0 0 0 0 2 0 0 0 1 0 0 11 0 1182.5881 H3BV90;Q6FI81 H3BV90 236 246 CIAPIN1 Anamorsin yes no 2 0.022575 61.11 By matching By MS/MS 1 1 6004300 3117600 2886700 7105 1146 7942 17962;17963 16336 16336 1 VLLSPSIPSVGQDQTLSPGSK KPAGQQPRVLLSPSIP QTLSPGSKQESPPAAA R V L S K Q 0 0 0 1 0 2 0 2 0 1 3 1 0 0 3 5 1 0 0 2 0 0 21 0 2109.1317 Q13625 Q13625 553 573 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 0.0033578 61.167 By MS/MS By MS/MS 1 1 19026000 9989700 9036400 7106 1931 7943 17964;17965 16337;16338 16338 3727;3728 2 VLNTGSDVEEAVADALK SSSVSAMRVLNTGSDV EAVADALKKPARRRYE R V L L K K 3 0 1 2 0 0 2 1 0 0 2 1 0 0 0 1 1 0 0 3 0 0 17 0 1729.8734 E3W994;J3KR49;O75122 E3W994 570 586 CLASP2 CLIP-associating protein 2 yes no 2 1.5631E-24 147.6 By MS/MS By matching 1 1 51247000 35698000 15549000 7107 690 7944 17966;17967 16339 16339 1228;6406 1 VLNTGSDVEEAVADALKKPAR SSSVSAMRVLNTGSDV DALKKPARRRYESYGM R V L A R R 4 1 1 2 0 0 2 1 0 0 2 2 0 0 1 1 1 0 0 3 0 0 21 2 2182.1594 E3W994;J3KR49;O75122 E3W994 570 590 CLASP2 CLIP-associating protein 2 yes no 3;4 0.00095407 68.189 By matching By MS/MS 2 2 32955000 19962000 12994000 7108 690 7945 17968;17969;17970;17971 16340;16341 16340 1228;6406 2 VLNTNIDGR EKFQHILRVLNTNIDG LNTNIDGRRKIAFAIT R V L G R R 0 1 2 1 0 0 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 9 0 1000.5302 P62269;A0A0G2JQH2;Q5GGW2 P62269 15 23 RPS18 40S ribosomal protein S18 yes no 2 0.0031724 126.52 By MS/MS 1 1679400 0 1679400 7109 1795 7946 17972 16342 16342 1 VLPGVDALSNI SLELLEGKVLPGVDAL GVDALSNI________ K V L N I - 1 0 1 1 0 0 0 1 0 1 2 0 0 0 1 1 0 0 0 2 0 0 11 0 1096.6128 P00558 P00558 407 417 PGK1 Phosphoglycerate kinase 1 yes yes 2 9.0455E-06 131.03 By MS/MS By MS/MS 1 1 19546000 11436000 8109900 7110 1513 7947 17973;17974 16343;16344 16344 2 VLPITVPKSPAFALK VVGVPEKKVLPITVPK KSPAFALKNRIRMPTK K V L L K N 2 0 0 0 0 0 0 0 0 1 2 2 0 1 3 1 1 0 0 2 0 0 15 1 1579.9702 Q9ULW0 Q9ULW0 478 492 TPX2 Targeting protein for Xklp2 yes yes 2;3 0.00041692 83.252 By MS/MS By MS/MS 2 2 58294000 32641000 25653000 7111 2854 7948 17975;17976;17977;17978 16345;16346;16347;16348 16346 5879 4 VLPITVPKSPAFALKNR VVGVPEKKVLPITVPK PAFALKNRIRMPTKED K V L N R I 2 1 1 0 0 0 0 0 0 1 2 2 0 1 3 1 1 0 0 2 0 0 17 2 1850.1142 Q9ULW0 Q9ULW0 478 494 TPX2 Targeting protein for Xklp2 yes yes 3 0.0076135 57.328 By MS/MS By MS/MS 1 1 7594300 3820500 3773800 7112 2854 7949 17979;17980 16349;16350 16349 5879 2 VLQATVVAVGSGSK LPEKSQGKVLQATVVA VAVGSGSKGKGGEIQP K V L S K G 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 2 1 0 0 4 0 0 14 0 1314.7507 B8ZZL8;S4R3N1;P61604 B8ZZL8 41 54 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial yes no 2 0.001429 94.767 By MS/MS By MS/MS 1 1 5424500 2929400 2495100 7113 532 7950 17981;17982 16351;16352 16351 2 VLQLYPNNK LARADFQKVLQLYPNN LQLYPNNKAAKTQLAV K V L N K A 0 0 2 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 9 0 1087.6026 Q02790;H0YFG2 Q02790 379 387 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 2 0.013975 77.674 By MS/MS By MS/MS 1 1 992970 0 992970 7114 1841 7951 17983;17984 16353;16354 16354 2 VLRRSNR LLVPASVKVLRRSNRK KVLRRSNRKKIDDPID K V L N R K 0 3 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 7 2 899.54133 Q8WWQ0 Q8WWQ0 1737 1743 PHIP PH-interacting protein yes yes 2 0.025634 54.765 By MS/MS By MS/MS 1 1 0 0 0 7115 2410 7952 17985;17986 16355;16356 16356 2 VLSDSEDEEKDADVPGTSTR LYNSMKKKVLSDSEDE DVPGTSTRKRKDHQPR K V L T R K 1 1 0 4 0 0 3 1 0 0 1 1 0 0 1 3 2 0 0 2 0 0 20 1 2148.9659 Q8WWQ0 Q8WWQ0 1279 1298 PHIP PH-interacting protein yes yes 3 3.5464E-05 79.426 By MS/MS By MS/MS 1 1 37328000 21949000 15379000 7116 2410 7953 17987;17988 16357;16358;16359 16358 4834;4835 3 VLSEPIGPESPSSTECPR EPIKQAFRVLSEPIGP PSSTECPRAWQCSDVP R V L P R A 0 1 0 0 1 0 3 1 0 1 1 0 0 0 4 4 1 0 0 1 0 0 18 0 1940.915 Q56NI9 Q56NI9 503 520 ESCO2 N-acetyltransferase ESCO2 yes yes 2 1.1889E-07 111.33 By MS/MS By matching 1 1 23110000 13186000 9924300 7117 2063 7954 17989;17990 16360 16360 4051 1 VLSGNCNHQEGTSSDDELPSAEMIDFQK RTKRRQARVLSGNCNH AEMIDFQKSQGDILQK R V L Q K S 1 0 2 3 1 2 3 2 1 1 2 1 1 1 1 4 1 0 0 1 0 0 28 0 3107.3448 P16383 P16383 417 444 GCFC2 GC-rich sequence DNA-binding factor 2 yes yes 3 2.154E-13 93.966 By MS/MS By MS/MS 1 1 104840000 57238000 47603000 7118 1585 7955 17991;17992 16361;16362 16362 2912;2913;2914;6674 2 VLSKLQSPSR AAQRLGKRVLSKLQSP SKLQSPSRARGPGGSP R V L S R A 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 3 0 0 0 1 0 0 10 1 1113.6506 K7EJB8;K7EMN0;Q96A00 K7EJB8 10 19 PPP1R14A Protein phosphatase 1 regulatory subunit 14A yes no 2 0.0082247 75.483 By MS/MS By MS/MS 1 1 6148800 3155900 2992900 7119 1266 7956 17993;17994 16363;16364 16364 2297 2 VLSLQGR QPVRMRTRVLSLQGRG RVLSLQGRGATSGRPA R V L G R G 0 1 0 0 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 7 0 771.46029 Q8N5J2 Q8N5J2 439 445 FAM63A Protein FAM63A yes yes 2 0.026067 77.732 By MS/MS By matching 1 1 12077000 6225700 5851400 7120 2318 7957 17995;17996 16365 16365 1 VLSNRGDSLSR WLAEAESRVLSNRGDS NRGDSLSRHARPPDPP R V L S R H 0 2 1 1 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 1 0 0 11 1 1202.6367 M0R0F9;W4VSQ9;Q15642 M0R0F9 311 321 TRIP10 Cdc42-interacting protein 4 yes no 2 0.00272 92.19 By MS/MS By MS/MS 1 1 29424000 15010000 14415000 7121 1312 7958 17997;17998 16366;16367 16367 2359 2 VLSPEELEDR EGSTKRKRVLSPEELE SPEELEDRQKKRQEAA R V L D R Q 0 1 0 1 0 0 3 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 10 0 1185.5877 A0A0A0MRH8;A0A0A0MSH9;Q86WJ1 A0A0A0MRH8 353 362 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes no 2 0.012868 78.548 By MS/MS By MS/MS 1 1 0 0 0 7122 185 7959 17999;18000 16368;16369 16368 327 2 VLSPGVSHR TQILRPPKVLSPGVSH LSPGVSHRLRDQELIL K V L H R L 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 2 0 0 0 2 0 0 9 0 950.52976 Q14676;A2AB07;A2AB05 Q14676 106 114 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2 0.01259 71.221 By matching By MS/MS 1 1 4771500 2660000 2111500 7123 1951 7960 18001;18002 16370 16370 3783 1 VLSPLIIK PKRLPDGRVLSPLIIK VLSPLIIKSTPRNLNR R V L I K S 0 0 0 0 0 0 0 0 0 2 2 1 0 0 1 1 0 0 0 1 0 0 8 0 881.59499 Q8NCN4 Q8NCN4 401 408 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 2 0.014146 80.688 By MS/MS By MS/MS 1 1 3561800 1944900 1616900 7124 2338 7961 18003;18004 16371;16372 16371 4687 2 VLSPLRSPPLIGSESAYESFLSADDK DSESPIEKVLSPLRSP SFLSADDKASGRGAES K V L D K A 2 1 0 2 0 0 2 1 0 1 4 1 0 1 3 6 0 0 1 1 0 0 26 1 2777.4123 P46821 P46821 1394 1419 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 1.0289E-07 82.302 By MS/MS By matching 1 1 5620500 4192900 1427600 7125 1712 7962 18005;18006 16373 16373 3189;3190 1 VLSPPHIK SSSATKQKVLSPPHIK VLSPPHIKADFNLADF K V L I K A 0 0 0 0 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 1 0 0 8 0 889.53854 A0A0D9SG79;Q9NZ09 A0A0D9SG79 170 177 UBAP1 Ubiquitin-associated protein 1 yes no 2 0.0064441 101.65 By MS/MS By MS/MS 1 1 12399000 6489900 5908800 7126 318 7963 18007;18008 16374;16375 16374 581 2 VLSPPKLNEVSSDANR FGQNMSERVLSPPKLN EVSSDANRENAAAESG R V L N R E 1 1 2 1 0 0 1 0 0 0 2 1 0 0 2 3 0 0 0 2 0 0 16 1 1724.9057 B7Z7F3;Q9H6Z4;K7ESQ0 B7Z7F3 258 273 RANBP3 Ran-binding protein 3 yes no 2;3 1.4565E-06 114.55 By MS/MS By MS/MS 3 2 34971000 16382000 18589000 7127 515 7964 18009;18010;18011;18012;18013 16376;16377;16378;16379;16380 16379 957 5 VLSPTAAKPSPFEGK IKIKKKKKVLSPTAAK KPSPFEGKTSTEPSTA K V L G K T 2 0 0 0 0 0 1 1 0 0 1 2 0 1 3 2 1 0 0 1 0 0 15 1 1527.8297 Q96QC0 Q96QC0 311 325 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 2 0.00041417 104.21 By MS/MS By MS/MS 1 1 119760000 61060000 58703000 7128 2529 7965 18014;18015 16381;16382;16383 16382 5104 3 VLSSTSEEDEPGVVK KALKPIERVLSSTSEE EDEPGVVKFLKMNCRY R V L V K F 0 0 0 1 0 0 3 1 0 0 1 1 0 0 1 3 1 0 0 3 0 0 15 0 1574.7675 Q8NI08 Q8NI08 206 220 NCOA7 Nuclear receptor coactivator 7 yes yes 2 2.0807E-09 121.95 By MS/MS By MS/MS 2 2 29415000 14999000 14416000 7129 2364 7966;7967 18016;18017;18018;18019 16384;16385;16386 16386 4739;4740 3 VLSTSTDLEAAVADALK PGSVNAMRVLSTSTDL AAVADALKKPVRRRYE R V L L K K 4 0 0 2 0 0 1 0 0 0 3 1 0 0 0 2 2 0 0 2 0 0 17 0 1702.8989 Q7Z460 Q7Z460 793 809 CLASP1 CLIP-associating protein 1 yes yes 2 7.1415E-06 108.63 By MS/MS By MS/MS 1 1 11744000 9537500 2206600 7130 2217 7968 18020;18021 16387;16388 16388 4432;6935;6936 2 VLSTSTDLEAAVADALKKPVR PGSVNAMRVLSTSTDL DALKKPVRRRYEPYGM R V L V R R 4 1 0 2 0 0 1 0 0 0 3 2 0 0 1 2 2 0 0 3 0 0 21 2 2183.2161 Q7Z460 Q7Z460 793 813 CLASP1 CLIP-associating protein 1 yes yes 3 2.6453E-09 103.88 By MS/MS By matching 1 1 4585300 3353500 1231800 7131 2217 7969 18022;18023 16389 16389 4432;6935;6936 1 VLTAKASTDL TCNSARIRVLTAKAST TAKASTDL________ R V L D L - 2 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 2 0 0 1 0 0 10 1 1017.5706 A0A087WZF1;Q93052 A0A087WZF1 581 590 LPP Lipoma-preferred partner yes no 2 3.8531E-05 123.01 By MS/MS By matching 1 1 12992000 8582500 4409800 7132 110 7970 18024;18025 16390 16390 202;6244 1 VLTANSNPSSPSAAK KRSRVTDKVLTANSNP PSSPSAAKRRRT____ K V L A K R 3 0 2 0 0 0 0 0 0 0 1 1 0 0 2 4 1 0 0 1 0 0 15 0 1442.7365 Q9NV56 Q9NV56 186 200 MRGBP MRG/MORF4L-binding protein yes yes 2 0.00062987 84.759 By MS/MS By MS/MS 1 1 38826000 21677000 17149000 7133 2737 7971 18026;18027 16391;16392 16391 5602;5603 2 VLTANSNPSSPSAAKR KRSRVTDKVLTANSNP SSPSAAKRRRT_____ K V L K R R 3 1 2 0 0 0 0 0 0 0 1 1 0 0 2 4 1 0 0 1 0 0 16 1 1598.8376 Q9NV56 Q9NV56 186 201 MRGBP MRG/MORF4L-binding protein yes yes 2;3 0.0006003 86.539 By MS/MS By MS/MS 2 2 13725000 7667500 6058000 7134 2737 7972 18028;18029;18030;18031 16393;16394;16395 16394 5602;5603 3 VLTPELYAELR AHNNHMAKVLTPELYA PELYAELRAKSTPSGF K V L L R A 1 1 0 0 0 0 2 0 0 0 3 0 0 0 1 0 1 0 1 1 0 0 11 0 1302.7184 P12277;G3V4N7;G3V461 P12277 33 43 CKB Creatine kinase B-type yes no 2 1.9219E-05 120.45 By MS/MS By MS/MS 3 3 55635000 33526000 22109000 7135 1571 7973;7974 18032;18033;18034;18035;18036;18037 16396;16397;16398;16399;16400;16401 16396 7564 6 VLTPPQAAGDGILATTANQR GSPPNATRVLTPPQAA LATTANQRFSSPAPSS R V L Q R F 4 1 1 1 0 2 0 2 0 1 2 0 0 0 2 0 3 0 0 1 0 0 20 0 1993.0593 C9J9G2;Q96QT6;K7EPF7 C9J9G2 669 688 PHF12 PHD finger protein 12 yes no 3 0.019976 48.489 By MS/MS By matching 1 1 5731300 3163300 2568000 7136 573 7975 18038;18039 16402 16402 1 VLYYMEK SQQDDSMRVLYYMEKE RVLYYMEKELANFDPS R V L E K E 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 2 1 0 0 7 0 944.46774 S4R3V8;Q86X29 S4R3V8 356 362 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.0137 82.305 By MS/MS By MS/MS 2 1 26375000 15355000 11020000 7137 2250 7976;7977 18040;18041;18042 16403;16404;16405;16406 16406 7777;7778 4 VMDSDEDDDY TVKFNRRKVMDSDEDD DSDEDDDY________ K V M D Y - 0 0 0 5 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 1 0 0 10 0 1202.3921 K7EQA1;O14737 K7EQA1 78 87 PDCD5 Programmed cell death protein 5 yes no 2 0.0037971 80.102 By MS/MS By MS/MS 1 1 0 0 0 7138 1285 7978 18043;18044 16407;16408 16407 143 2317;7486 2 VMEGTVAAQDEFYR CTRLIKPKVMEGTVAA AAQDEFYRSGWALNMK K V M Y R S 2 1 0 1 0 1 2 1 0 0 0 0 1 1 0 0 1 0 1 2 0 0 14 0 1614.7348 P41240 P41240 172 185 CSK Tyrosine-protein kinase CSK yes yes 2 1.568E-12 133.89 By MS/MS By MS/MS 2 2 22440000 10767000 11673000 7139 1693 7979;7980 18045;18046;18047;18048 16409;16410;16411;16412;16413;16414 16412 210 7601 6 VMFHSFVSK QEGVGEGKVMFHSFVS MFHSFVSKTEEELQAI K V M S K T 0 0 0 0 0 0 0 0 1 0 0 1 1 2 0 2 0 0 0 2 0 0 9 0 1080.5426 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53 242 250 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2 0.02331 62.463 By MS/MS By matching 1 1 68432000 36778000 31654000 7140 255 7981 18049;18050 16415 16415 1 VMTIPYQPMPASSPVICAGGQDR LSQSPQGRVMTIPYQP ICAGGQDRCSDAAGYP R V M D R C 2 1 0 1 1 2 0 2 0 2 0 0 2 0 4 2 1 0 1 2 0 0 23 0 2474.1756 Q15365 Q15365 178 200 PCBP1 Poly(rC)-binding protein 1 yes yes 2;3 5.0777E-43 142.25 By MS/MS By MS/MS 7 6 445360000 248300000 197060000 7141 1984 7982;7983;7984 18051;18052;18053;18054;18055;18056;18057;18058;18059;18060;18061;18062;18063 16416;16417;16418;16419;16420;16421;16422;16423;16424;16425;16426;16427;16428;16429 16427 268;269 3871;3872;7712 14 VNARMNKTSR QNLESVAKVNARMNKT ARMNKTSRRSEDLDNA K V N S R R 1 2 2 0 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 10 2 1175.6193 O95171 O95171 336 345 SCEL Sciellin yes yes 2 0.014096 50.786 By MS/MS 1 0 0 0 7142 1476 7985 18064 16430 16430 175 2730 1 VNDAEPGSPEAPQGK RRPRRRRRVNDAEPGS SPEAPQGKRRKADGED R V N G K R 2 0 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 15 0 1494.6951 Q8N8A6 Q8N8A6 76 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 2 1.9471E-23 151.49 By MS/MS By MS/MS 1 1 75076000 34622000 40454000 7143 2325 7986 18065;18066 16431;16432 16431 4666 2 VNDAEPGSPEAPQGKR RRPRRRRRVNDAEPGS PEAPQGKRRKADGEDA R V N K R R 2 1 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 16 1 1650.7962 Q8N8A6 Q8N8A6 76 91 DDX51 ATP-dependent RNA helicase DDX51 yes yes 3 0.019875 53.359 By MS/MS 1 0 0 0 7144 2325 7987 18067 16433 16433 4666 1 VNFCPLPSEQCYQAPGGPEDR AALQPHPRVNFCPLPS APGGPEDRGPAWVGSH R V N D R G 1 1 1 1 2 2 2 2 0 0 1 0 0 1 4 1 0 0 1 1 0 0 21 0 2420.0525 Q15654 Q15654 44 64 TRIP6 Thyroid receptor-interacting protein 6 yes yes 3 0.006661 48.616 By MS/MS By MS/MS 1 1 10208000 5825300 4382300 7145 2000 7988 18068;18069 16434;16435 16435 7723 2 VNFPENGFLSPDKLSLLEK GRLIIEFKVNFPENGF DKLSLLEKLLPERKEV K V N E K L 0 0 2 1 0 0 2 1 0 0 4 2 0 2 2 2 0 0 0 1 0 0 19 1 2146.131 P31689 P31689 326 344 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 3 0.010749 49.049 By MS/MS By matching 1 1 9758500 7444000 2314500 7146 1661 7989 18070;18071 16436 16436 3061 1 VNFSEEGETEEDDQDSSHSSVTTVK EATSVQQKVNFSEEGE HSSVTTVKARSRDSDE K V N V K A 0 0 1 3 0 1 5 1 1 0 0 1 0 1 0 5 3 0 0 3 0 0 25 0 2755.158 A0A0A0MSK5;J3KN66;Q5JTV8;H0YD16 A0A0A0MSK5 91 115 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 6.617E-10 87.532 By MS/MS By MS/MS 2 2 115910000 58826000 57086000 7147 218 7990 18072;18073;18074;18075 16437;16438;16439 16438 401;6283 3 VNFTVDQIR ________________ NFTVDQIRAIMDKKAN M V N I R A 0 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 2 0 0 9 0 1090.5771 P13639 P13639 2 10 EEF2 Elongation factor 2 yes yes 2 1.2381E-05 160.63 By MS/MS By MS/MS 1 1 17302000 9514400 7787500 7148 1575 7991 18076;18077 16440;16441 16440 2 VNGDASPAAAESGAK GQENGHVKVNGDASPA AAAESGAKEELQANGS K V N A K E 5 0 1 1 0 0 1 2 0 0 0 1 0 0 1 2 0 0 0 1 0 0 15 0 1343.6317 P29966 P29966 41 55 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.0021717 74.783 By MS/MS 1 2390200 2390200 0 7149 1648 7992 18078 16442 16442 3052 1 VNGDDHHEEDMDMSD GDSLRESKVNGDDHHE EEDMDMSD________ K V N S D - 0 0 1 5 0 0 2 1 2 0 0 0 2 0 0 1 0 0 0 1 0 0 15 0 1744.5941 Q5T757;Q05519 Q5T757 410 424 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.0076421 101.61 By MS/MS By MS/MS 2 2 0 0 0 7150 1853 7993 18079;18080;18081;18082 16443;16444;16445;16446 16444 3490 4 VNGTTVSSPSTSLQR EQPQAEAKVNGTTVSS SPSTSLQRSDSSQPML K V N Q R S 0 1 1 0 0 1 0 1 0 0 1 0 0 0 1 4 3 0 0 2 0 0 15 0 1532.7794 E9PDN5;A0A075B6G3;P11532;A0A087WV90;A0A087WTU7;E7EQR9;F5GZY3;E7EQS5;F8VX32;E7ESB2;H0Y304 E9PDN5 3602 3616 DMD Dystrophin yes no 2 0.0003636 101.42 By MS/MS By MS/MS 1 2 9130200 4164300 4965900 7151 6 7994 18083;18084;18085 16447;16448 16448 14;15 2 VNHEPEPAGGATPGATLPKSPSQLR PAATPEIRVNHEPEPA PKSPSQLRKGPPVPPP R V N L R K 3 1 1 0 0 1 2 3 1 0 2 1 0 0 5 2 2 0 0 1 0 0 25 1 2510.2877 O00499 O00499 312 336 BIN1 Myc box-dependent-interacting protein 1 yes yes 3 7.6118E-10 86.707 By MS/MS By matching 1 1 12676000 7526100 5150300 7152 1333 7995 18086;18087 16449 16449 2402 1 VNLEESSGVENSPAGARPK VLDFHLNRVNLEESSG SPAGARPKRKNKKSYD R V N P K R 2 1 2 0 0 0 3 2 0 0 1 1 0 0 2 3 0 0 0 2 0 0 19 1 1939.9599 Q8WVM8 Q8WVM8 292 310 SCFD1 Sec1 family domain-containing protein 1 yes yes 2;3 2.1274E-13 120.82 By MS/MS By MS/MS 2 2 68438000 33497000 34941000 7153 2404 7996 18088;18089;18090;18091 16450;16451;16452;16453 16451 4809 4 VNLFPGLSPSALK SLGTKGLKVNLFPGLS GLSPSALKAKLRPRNR K V N L K A 1 0 1 0 0 0 0 1 0 0 3 1 0 1 2 2 0 0 0 1 0 0 13 0 1341.7656 Q9C0C2 Q9C0C2 1645 1657 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0020285 88.163 By MS/MS By MS/MS 1 1 5361900 2682100 2679800 7154 2615 7997 18092;18093 16454;16455 16454 5308 2 VNQIGSVTESLQACK SCNCLLLKVNQIGSVT TESLQACKLAQANGWG K V N C K L 1 0 1 0 1 2 1 1 0 1 1 1 0 0 0 2 1 0 0 2 0 0 15 0 1632.8141 P06733 P06733 344 358 ENO1 Alpha-enolase yes yes 2 0.0032674 77.387 By matching By MS/MS 1 1 9657400 5710200 3947300 7155 1532 7998 18094;18095 16456 16456 1 VNQSALEAVTPSPSFQQR NPEETAARVNQSALEA PSPSFQQRHESLRPAA R V N Q R H 2 1 1 0 0 3 1 0 0 0 1 0 0 1 2 3 1 0 0 2 0 0 18 0 1957.9858 Q9UKG1 Q9UKG1 390 407 APPL1 DCC-interacting protein 13-alpha yes yes 2 0.00021576 79.676 By MS/MS By MS/MS 1 1 15957000 7773100 8184200 7156 2829 7999 18096;18097 16457;16458 16457 5826 2 VNSGDTEVGSSLLR VKAIPRRRVNSGDTEV EVGSSLLRHPSPELSR R V N L R H 0 1 1 1 0 0 1 2 0 0 2 0 0 0 0 3 1 0 0 2 0 0 14 0 1432.7158 O75592 O75592 3465 3478 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 6.3562E-08 126.91 By MS/MS By MS/MS 1 1 19114000 8860400 10254000 7157 1444 8000 18098;18099 16459;16460 16460 2670 2 VNSGDTEVGSSLLRHPSPELSR VKAIPRRRVNSGDTEV HPSPELSRLISAHSSL R V N S R L 0 2 1 1 0 0 2 2 1 0 3 0 0 0 2 5 1 0 0 2 0 0 22 1 2336.1721 O75592 O75592 3465 3486 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 3 0.0044735 51.971 By MS/MS By matching 1 1 8188100 4581300 3606800 7158 1444 8001 18100;18101 16461 16461 2670 1 VNSPGTLAR GGKSTITRVNSPGTLA NSPGTLARLGSVTHVT R V N A R L 1 1 1 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 0 1 0 0 9 0 913.49813 A0A087WVP4;A0A087X1R1;P53814 A0A087WVP4 568 576 SMTN Smoothelin yes no 2 0.010408 73.9 By MS/MS 1 3164500 3164500 0 7159 63 8002 18102 16462 16462 112 1 VNVPEESRNGETSPR NSPNTYMKVNVPEESR RNGETSPRTKITWMKA K V N P R T 0 2 2 0 0 0 3 1 0 0 0 0 0 0 2 2 1 0 0 2 0 0 15 1 1669.802 Q9UEY8 Q9UEY8 449 463 ADD3 Gamma-adducin yes yes 3 0.027129 50.897 By matching By MS/MS 1 1 16967000 7869900 9097000 7160 2808 8003 18103;18104 16463 16463 1 VNVTVDYIRPASPATETVPAFSER RKKLIGKKVNVTVDYI TVPAFSERTCATVTIG K V N E R T 3 2 1 1 0 0 2 0 0 1 0 0 0 1 3 2 3 0 1 4 0 0 24 1 2618.334 Q7KZF4 Q7KZF4 415 438 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 3 0.001005 57.691 By MS/MS By matching 1 1 11897000 6481200 5416100 7161 2197 8004 18105;18106 16464 16464 4374 1 VNWSKDEENYNNQR V N Q R 0 1 4 1 0 1 2 0 0 0 0 1 0 0 0 1 0 1 1 1 0 0 14 1 1794.7921 REV__Q07001 yes yes 2 0.017065 60.549 By matching By MS/MS 1 2 106000000 46378000 59623000 + 7162 2991 8005 18107;18108;18109 16465 16465 6182 1 VPADTEVVCAPPTAYIDFAR IGTLNAAKVPADTEVV TAYIDFARQKLDPKIA K V P A R Q 4 1 0 2 1 0 1 0 0 1 0 0 0 1 3 0 2 0 1 3 0 0 20 0 2191.062 P60174 P60174 71 90 TPI1 Triosephosphate isomerase yes yes 2 0.012784 57.434 By MS/MS 1 1881600 1881600 0 7163 1781 8006 18110 16466 16466 1 VPAKLSPMK SHTKSLPKVPAKLSPM PAKLSPMKQAQLRNFL K V P M K Q 1 0 0 0 0 0 0 0 0 0 1 2 1 0 2 1 0 0 0 1 0 0 9 1 969.56812 A0A0A0MSW3;P35658 A0A0A0MSW3 364 372 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.0037924 111.52 By matching By MS/MS 1 1 21955000 11375000 10581000 7164 226 8007 18111;18112 16467 16467 411 1 VPASPLPGLER RKASSTAKVPASPLPG SPLPGLERKKTTPTPS K V P E R K 1 1 0 0 0 0 1 1 0 0 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1134.6397 E7ETY4;E9PC69;Q7KZI7 E7ETY4 419 429 MARK2 Serine/threonine-protein kinase MARK2 yes no 2 0.0023273 90.614 By MS/MS By MS/MS 1 1 12802000 7995700 4806700 7165 738 8008 18113;18114 16468;16469;16470;16471 16470 1331 4 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPR RSPGSNSKVPEIEVTV SNVPFKPRGREFSFEA K V P P R G 1 2 6 0 0 2 3 2 0 1 0 1 0 1 6 2 5 0 0 5 0 0 37 2 3988.0039 P78347 P78347 681 717 GTF2I General transcription factor II-I yes yes 4 0.0036216 43.579 By MS/MS 1 9434400 0 9434400 7166 1815 8009 18115 16472 16472 3389;6751;6752;6754 1 VPKSPEHSAEPIR KAEGKVERVPKSPEHS EHSAEPIRTFIKAKEY R V P I R T 1 1 0 0 0 0 2 0 1 1 0 1 0 0 3 2 0 0 0 1 0 0 13 1 1445.7627 Q9ULH0 Q9ULH0 1552 1564 KIDINS220 Kinase D-interacting substrate of 220 kDa yes yes 3 0.0016902 78.508 By MS/MS By matching 1 1 11513000 7059700 4453700 7167 2844 8010 18116;18117 16473 16473 5848 1 VPLAHPEDMDPSDNYAEPIDTIFK NPRKQTSRVPLAHPED EPIDTIFKQKGYSDEI R V P F K Q 2 0 1 4 0 0 2 0 1 2 1 1 1 1 4 1 1 0 1 1 0 0 24 0 2713.2581 Q13017;A0A0A0MSK6 Q13017 1077 1100 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 4.4515E-05 72.564 By MS/MS By MS/MS 3 3 50871000 26913000 23958000 7168 1891 8011;8012;8013 18118;18119;18120;18121;18122;18123 16474;16475;16476;16477 16475 247 3613;7684 4 VPLAPITDPQQLQLSPLK ________________ QLQLSPLKGLSLVDKE R V P L K G 1 0 0 1 0 3 0 0 0 1 4 1 0 0 4 1 1 0 0 1 0 0 18 0 1957.1248 P31350 P31350 6 23 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 2;3 2.0771E-09 118.31 By MS/MS By MS/MS 2 2 52734000 34256000 18478000 7169 1659 8014 18124;18125;18126;18127 16478;16479;16480;16481 16480 3060 4 VPLSPLSLLAGPADAR GASPHHRRVPLSPLSL LAGPADARRSQQQLPK R V P A R R 3 1 0 1 0 0 0 1 0 0 4 0 0 0 3 2 0 0 0 1 0 0 16 0 1575.8984 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 430 445 CRTC2 CREB-regulated transcription coactivator 2 yes no 2 9.8015E-10 124.5 By MS/MS By MS/MS 1 1 7859800 5883300 1976500 7170 2054 8015 18128;18129 16482;16483 16482 4040 2 VPLVQRGSANGL SPVVELSKVPLVQRGS QRGSANGL________ K V P G L - 1 1 1 0 0 1 0 2 0 0 2 0 0 0 1 1 0 0 0 2 0 0 12 1 1209.683 P25098 P25098 678 689 ADRBK1 Beta-adrenergic receptor kinase 1 yes yes 2 0.0038083 85.554 By MS/MS By MS/MS 1 1 3735100 2298000 1437100 7171 1630 8016 18130;18131 16484;16485 16484 3018 2 VPPAPVPCPPPSPGPSAVPSSPK PSEKVEVKVPPAPVPC SAVPSSPKSVATEERA K V P P K S 2 0 0 0 1 0 0 1 0 0 0 1 0 0 11 4 0 0 0 3 0 0 23 0 2218.1456 O95817 O95817 366 388 BAG3 BAG family molecular chaperone regulator 3 yes yes 3 1.4922E-09 89.668 By MS/MS By matching 1 1 22980000 14884000 8095900 7172 1502 8017 18132;18133 16486;16487;16488 16486 2785;2786;2787 3 VPPELLGGSPPWK STRPKPARVPPELLGG LGGSPPWKTLDHRLGH R V P W K T 0 0 0 0 0 0 1 2 0 0 2 1 0 0 4 1 0 1 0 1 0 0 13 0 1375.75 E7EVA0 E7EVA0 715 727 MAP4 Microtubule-associated protein yes yes 2 0.023191 71.548 By MS/MS 1 0 0 0 7173 742 8018 18134 16489 16489 1 VPQRTSSIATALNTSGAGGSRPAQAVR PDNEAPPKVPQRTSSI SRPAQAVRARPRSNSA K V P V R A 5 3 1 0 0 2 0 3 0 1 1 0 0 0 2 4 3 0 0 2 0 0 27 2 2652.4056 Q8N4C8 Q8N4C8 668 694 MINK1 Misshapen-like kinase 1 yes yes 3 0.024599 47.058 By MS/MS 1 0 0 0 7174 2311 8019 18135 16490 16490 1 VPRPPEREDSDNDDDTHVR EPPPRSRRVPRPPERE NDDDTHVRMDFARRDN R V P V R M 0 3 1 5 0 0 2 0 1 0 0 0 0 0 3 1 1 0 0 2 0 0 19 2 2248.0105 O14654;H3BTC1 O14654 1222 1240 IRS4 Insulin receptor substrate 4 no no 3;4 0.012443 50.752 By MS/MS By matching 2 2 90546000 40745000 49800000 7175 1343;1142 8020 18136;18137;18138;18139 16491;16492 16492 2084 2 VPSAPGQESPIPDPK PPEMVGQRVPSAPGQE ESPIPDPKLMPHMKNE R V P P K L 1 0 0 1 0 1 1 1 0 1 0 1 0 0 5 2 0 0 0 1 0 0 15 0 1517.7726 E9PGC8;P78559 E9PGC8 2048 2062 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.0014161 80.014 By MS/MS By MS/MS 1 1 6388700 3526700 2862000 7176 791 8021 18140;18141 16493;16494 16493 1422 2 VPSPLEGSEGDGDTD QRCARTDKVPSPLEGS SEGDGDTD________ K V P T D - 0 0 0 3 0 0 2 3 0 0 1 0 0 0 2 2 1 0 0 1 0 0 15 0 1473.6107 F5H168;F5H1S9;Q9Y606 F5H168 120 134 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 2 0.00041441 106.55 By MS/MS By MS/MS 2 2 38285000 21250000 17036000 7177 875 8022;8023 18142;18143;18144;18145 16495;16496;16497 16496 1570;6466 3 VPSSDEEVVEEPQSR STEPRASRVPSSDEEV VVEEPQSRRTRMSLGT R V P S R R 0 1 0 1 0 1 4 0 0 0 0 0 0 0 2 3 0 0 0 3 0 0 15 0 1685.7744 Q9C0C2 Q9C0C2 1618 1632 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0023544 67.08 By MS/MS 1 4931800 4931800 0 7178 2615 8024 18146 16498 16498 5293;5294 1 VPSTPPPK SGEERAAKVPSTPPPK VPSTPPPKAAPPPPAL K V P P K A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 1 1 0 0 1 0 0 8 0 821.4647 Q9H7N4 Q9H7N4 973 980 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.022255 114.51 By MS/MS By MS/MS 1 1 16768000 8995500 7772600 7179 2675 8025 18147;18148 16499;16500;16501 16499 3 VPSVESLFR FAQKLQLRVPSVESLF PSVESLFRSPIKESLF R V P F R S 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 2 0 0 0 2 0 0 9 0 1032.5604 Q86W71;E7EVX2;Q13439 Q86W71 69 77 GOLGA4 Golgin subfamily A member 4 yes no 2 0.0023722 115.23 By MS/MS By MS/MS 1 1 30269000 15716000 14553000 7180 744 8026 18149;18150 16502;16503 16503 1354 2 VPTANVSVVDLTCR KLTGMAFRVPTANVSV SVVDLTCRLEKPAKYD R V P C R L 1 1 1 1 1 0 0 0 0 0 1 0 0 0 1 1 2 0 0 4 0 0 14 0 1529.7872 P04406;E7EUT5 P04406 235 248 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.0014329 101.72 By MS/MS By MS/MS 1 1 12402000 7204700 5197300 7181 1522 8027 18151;18152 16504;16505 16504 2 VPVLISPTLK LPTTHNHKVPVLISPT VLISPTLKHTPADVQL K V P L K H 0 0 0 0 0 0 0 0 0 1 2 1 0 0 2 1 1 0 0 2 0 0 10 0 1065.6798 P42684 P42684 931 940 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.00097653 106.67 By MS/MS By MS/MS 1 1 28503000 16997000 11507000 7182 1699 8028 18153;18154 16506;16507 16506 3124 2 VPVNLLNSPDCDVK KQSCPFGRVPVNLLNS NSPDCDVKTDDSVVPC R V P V K T 0 0 2 2 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 3 0 0 14 0 1568.7868 P33981 P33981 274 287 TTK Dual specificity protein kinase TTK yes yes 2 5.0901E-14 140.96 By MS/MS By MS/MS 1 1 13494000 6825200 6668500 7183 1667 8029 18155;18156 16508;16509 16508 3067 2 VPVPESPAFSR RPSTRFLKVPVPESPA PESPAFSRHADPAHQL K V P S R H 1 1 0 0 0 0 1 0 0 0 0 0 0 1 3 2 0 0 0 2 0 0 11 0 1184.619 A4D1S0 A4D1S0 153 163 KLRG2 Killer cell lectin-like receptor subfamily G member 2 yes yes 2 0.0003528 109.84 By MS/MS By MS/MS 1 1 7140800 4248100 2892700 7184 405 8030 18157;18158 16510;16511 16510 772;773 2 VQAGPGSPR GRGAAVSRVQAGPGSP QAGPGSPRRARGRQQV R V Q P R R 1 1 0 0 0 1 0 2 0 0 0 0 0 0 2 1 0 0 0 1 0 0 9 0 867.45626 I3L0U5;Q6PK04;I3L4F6 I3L0U5 13 21 CCDC137 Coiled-coil domain-containing protein 137 yes no 2 0.0029561 104.07 By MS/MS By MS/MS 1 2 24505000 13909000 10596000 7185 1196 8031 18159;18160;18161 16512;16513;16514;16515;16516;16517;16518;16519;16520 16519 2176 9 VQAMQISSEKEEDDNEKR EVDYSGLRVQAMQISS EEDDNEKRQDPGDNWE R V Q K R Q 1 1 1 2 0 2 4 0 0 1 0 2 1 0 0 2 0 0 0 1 0 0 18 2 2134.9801 Q9UKY7;H0Y8K3 Q9UKY7 100 117 CDV3 Protein CDV3 homolog yes no 3 0.010632 53.861 By matching By MS/MS 1 1 7688100 3656800 4031300 7186 2839 8032 18162;18163 16521 16521 5841;5842 1 VQAYEEPSVASSPNGK LTQDWESRVQAYEEPS VASSPNGKESDLRRSE R V Q G K E 2 0 1 0 0 1 2 1 0 0 0 1 0 0 2 3 0 0 1 2 0 0 16 0 1661.7897 Q99575 Q99575 719 734 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 2 1.068E-164 236.31 By MS/MS By MS/MS 3 2 110570000 62864000 47708000 7187 2553 8033;8034 18164;18165;18166;18167;18168 16522;16523;16524;16525;16526 16523 25 5162;5163;5164 5 VQAYEEPSVASSPNGKESDLR LTQDWESRVQAYEEPS NGKESDLRRSEVPCAP R V Q L R R 2 1 1 1 0 1 3 1 0 0 1 1 0 0 2 4 0 0 1 2 0 0 21 1 2262.0764 Q99575 Q99575 719 739 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 2;3 2.1176E-10 108.77 By MS/MS By MS/MS 5 5 276390000 157720000 118670000 7188 2553 8035;8036 18169;18170;18171;18172;18173;18174;18175;18176;18177;18178 16527;16528;16529;16530;16531;16532;16533;16534;16535 16534 25 5162;5163;5164 9 VQDTSNTGLGEDIIHQLSK EENDFTEKVQDTSNTG DIIHQLSKSEEKELRK K V Q S K S 0 0 1 2 0 2 1 2 1 2 2 1 0 0 0 2 2 0 0 1 0 0 19 0 2054.028 Q8IWA0 Q8IWA0 792 810 WDR75 WD repeat-containing protein 75 yes yes 3 0.010841 48.913 By MS/MS By matching 1 1 3520400 1747100 1773300 7189 2266 8037 18179;18180 16536 16536 4546 1 VQEHEDSGDSEVENEAK LRRLRGPRVQEHEDSG SEVENEAKGNFPPQKK R V Q A K G 1 0 1 2 0 1 5 1 1 0 0 1 0 0 0 2 0 0 0 2 0 0 17 0 1900.7923 Q9Y5J1 Q9Y5J1 115 131 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 2;3 1.6332E-07 120.82 By MS/MS By MS/MS 3 2 52249000 25254000 26995000 7190 2929 8038;8039 18181;18182;18183;18184;18185 16537;16538;16539;16540;16541 16539 6087;6088 5 VQEKPDSPGGSTQIQR SKPCGSPRVQEKPDSP GGSTQIQRYLDAERLA R V Q Q R Y 0 1 0 1 0 3 1 2 0 1 0 1 0 0 2 2 1 0 0 1 0 0 16 1 1725.8646 M0R300;M0R0P8;Q13459 M0R300 1284 1299 MYO9B Unconventional myosin-IXb yes no 2 0.0012306 79.347 By MS/MS By MS/MS 1 1 23763000 11540000 12223000 7191 1315 8040 18186;18187 16542;16543 16542 2367 2 VQEYGELDAKDYIPGAEVLEVEK TEASIEARVQEYGELD AEVLEVEKEENAENDE R V Q E K E 2 0 0 2 0 1 5 2 0 1 2 2 0 0 1 0 0 0 2 3 0 0 23 1 2593.2799 E7EW05;Q9NVU7 E7EW05 427 449 SDAD1 Protein SDA1 homolog yes no 2 0.024362 46.318 By MS/MS 1 0 0 0 7192 746 8041 18188 16544 16544 7372;7373 1 VQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVK LAAAEKFKVQGEAVSN DETGVEVKDIELVMSQ K V Q V K D 1 0 2 1 0 4 10 2 0 1 0 1 0 0 1 2 4 0 0 6 0 0 35 0 3859.7607 F8VZJ2;F8W0W4;H0YHX9;Q13765;E9PAV3 F8VZJ2 66 100 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 3;4 7.3009E-39 105.19 By MS/MS By MS/MS 3 1 288660000 186670000 102000000 7193 755 8042 18189;18190;18191;18192 16545;16546;16547;16548 16546 1380;6435 4 VQGGVPAGSDEYEDECPHLIALSSLNR YNRQDGQRVQGGVPAG IALSSLNREFRPFRDE R V Q N R E 2 1 1 2 1 1 3 3 1 1 3 0 0 0 2 3 0 0 1 2 0 0 27 0 2912.3611 Q9BVS4;H0Y919;H0Y8R4 Q9BVS4 434 460 RIOK2 Serine/threonine-protein kinase RIO2 yes no 3 0.00014136 62.237 By MS/MS By matching 1 1 14286000 7456600 6829700 7194 2587 8043 18193;18194 16549 16549 7873 1 VQGSHSLSRGTVCHRTGVQPHEPK QVWVIANKVQGSHSLS GVQPHEPKGHGWDYGI K V Q P K G 0 2 0 0 1 2 1 3 3 0 1 1 0 0 2 3 2 0 0 3 0 0 24 2 2653.3255 Q7Z6L1 Q7Z6L1 1096 1119 TECPR1 Tectonin beta-propeller repeat-containing protein 1 yes yes 3 0.0098589 47.603 By MS/MS 1 1837700 0 1837700 7195 2225 8044 18195 16550 16550 4455;6937 1 VQGSPLKK LSSQERMKVQGSPLKK VQGSPLKKLFTSTGLK K V Q K K L 0 0 0 0 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 8 1 855.5178 Q02952 Q02952 511 518 AKAP12 A-kinase anchor protein 12 yes yes 2 0.012679 131.62 By MS/MS By MS/MS 1 1 12756000 7298800 5456800 7196 1843 8045 18196;18197 16551;16552 16551 3462 2 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR ITIRRKKKVQIPVSRP DEEIHDPRSGRSGVVN K V Q P R S 0 2 1 5 0 1 5 0 1 2 0 0 0 0 5 3 0 0 1 3 0 0 29 1 3362.5175 A0A087X0K9;G5E9E7;G3V1L9;Q07157;H0YKB1 A0A087X0K9 100 128 TJP1 Tight junction protein ZO-1 yes no 3 0.00022465 63.372 By MS/MS By MS/MS 1 1 63986000 36540000 27447000 7197 129 8046 18198;18199 16553;16554 16554 233;234;7177 2 VQISPDSGGLPER IQQDSGCKVQISPDSG DSGGLPERSVSLTGAP K V Q E R S 0 1 0 1 0 1 1 2 0 1 1 0 0 0 2 2 0 0 0 1 0 0 13 0 1353.6888 A0A087WTP3;Q92945;M0QXW7;M0QYH3 A0A087WTP3 178 190 KHSRP Far upstream element-binding protein 2 yes no 2 0.0013519 94.023 By MS/MS By MS/MS 1 1 72497000 41876000 30621000 7198 28 8047 18200;18201 16555;16556 16556 56 2 VQMTSPSSTGSPMFK SSQALTNKVQMTSPSS STGSPMFKFSSPIVKS K V Q F K F 0 0 0 0 0 1 0 1 0 0 0 1 2 1 2 4 2 0 0 1 0 0 15 0 1583.7324 P49790 P49790 512 526 NUP153 Nuclear pore complex protein Nup153 yes yes 2 9.352E-10 126.77 By MS/MS By MS/MS 6 4 111080000 68467000 42617000 7199 1729 8048;8049;8050 18202;18203;18204;18205;18206;18207;18208;18209;18210;18211 16557;16558;16559;16560;16561;16562;16563;16564;16565 16560 214;215 3255;3256;3257;3258;6721 9 VQNATTKGPNGVYDFSQAHNAKDVPNTQPK ARPKSAFKVQNATTKG DVPNTQPKAAFKSQNA K V Q P K A 3 0 4 2 0 3 0 2 1 0 0 3 0 1 3 1 3 0 1 3 0 0 30 2 3225.5803 Q9Y5V3 Q9Y5V3 80 109 MAGED1 Melanoma-associated antigen D1 yes yes 3 0.0062863 46.404 By matching By MS/MS 1 1 107380000 70466000 36909000 7200 2938 8051 18212;18213 16566 16566 7133;7134;7135;7960 1 VQQTVQDLFGR GGMTRMPKVQQTVQDL TVQDLFGRAPSKAVNP K V Q G R A 0 1 0 1 0 3 0 1 0 0 1 0 0 1 0 0 1 0 0 2 0 0 11 0 1289.6728 P38646 P38646 395 405 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0003448 111.61 By MS/MS 1 2251000 2251000 0 7201 1680 8052 18214 16567 16567 1 VQRPHSSPPR SDSSSPQRVQRPHSSP RPHSSPPRFVTVEELL R V Q P R F 0 2 0 0 0 1 0 0 1 0 0 0 0 0 3 2 0 0 0 1 0 0 10 1 1159.621 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3 R4GNF5 50 59 TCP11L1 T-complex protein 11-like protein 1 yes no 3 0.018771 55.291 By matching By MS/MS 1 1 16002000 8895300 7106700 7202 808 8053 18215;18216 16568 16568 1450 1 VQSLEGEKLSPK YASLTSEKVQSLEGEK EGEKLSPKSDISPLTP K V Q P K S 0 0 0 0 0 1 2 1 0 0 2 2 0 0 1 2 0 0 0 1 0 0 12 1 1313.7191 P46821 P46821 1770 1781 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0049712 78.985 By matching By MS/MS 1 1 14637000 8780800 5856000 7203 1712 8054 18217;18218 16569 16569 3191 0 VQSPEPPAPER RRHQERLRVQSPEPPA PEPPAPERALSPAELR R V Q E R A 1 1 0 0 0 1 2 0 0 0 0 0 0 0 4 1 0 0 0 1 0 0 11 0 1205.6041 A0A0G2JMS7;A0A0G2JNZ2;Q14160;A0A0G2JPP5;H0YCG0 A0A0G2JMS7 1392 1402 SCRIB Protein scribble homolog yes no 2 0.00038877 109.44 By MS/MS By MS/MS 1 2 23356000 12199000 11157000 7204 322 8055 18219;18220;18221 16570;16571 16571 598 2 VQSPKPITGGLGAFTK CPIGSHPKVQSPKPIT GGLGAFTKVIIKQEPG K V Q T K V 1 0 0 0 0 1 0 3 0 1 1 2 0 1 2 1 2 0 0 1 0 0 16 1 1599.8984 Q9ULM3 Q9ULM3 573 588 YEATS2 YEATS domain-containing protein 2 yes yes 3 0.00065884 75.682 By MS/MS By MS/MS 1 1 6164100 2948400 3215800 7205 2853 8056 18222;18223 16572;16573 16573 5877 2 VQTEVLQKRQQEK ALRKYGKKVQTEVLQK LQKRQQEKAHMMNAIK K V Q E K A 0 1 0 0 0 4 2 0 0 0 1 2 0 0 0 0 1 0 0 2 0 0 13 2 1612.8897 H7C2Q8;Q99848 H7C2Q8 235 247 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 2 0.0056386 81.771 By MS/MS 1 2982500 2982500 0 7206 1176 8057 18224 16574 16574 1 VQTLSNQPLLKSPAPPLLHVAALGQK AVPWNAVKVQTLSNQP HVAALGQKQGILGAQP K V Q Q K Q 3 0 1 0 0 3 0 1 1 0 6 2 0 0 4 2 1 0 0 2 0 0 26 1 2719.5749 Q8N163;H0YC69;E5RGU7;E5RFJ3;H0YC58 Q8N163 113 138 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 3;4 0.00025221 60.347 By MS/MS By MS/MS 2 2 20281000 11512000 8769400 7207 2297 8058 18225;18226;18227;18228 16575;16576 16575 4614;4615 2 VQTTPPPAVQGQK APVRQQPKVQTTPPPA PPAVQGQKVGSLTPPS K V Q Q K V 1 0 0 0 0 3 0 1 0 0 0 1 0 0 3 0 2 0 0 2 0 0 13 0 1349.7303 Q2M2I8;E9PG46 Q2M2I8 603 615 AAK1 AP2-associated protein kinase 1 yes no 2 2.5086E-11 148.89 By MS/MS By MS/MS 1 1 42884000 22255000 20629000 7208 2030 8059 18229;18230 16577;16578 16578 6853 2 VQTTPSKPGGDR TPGKSSSKVQTTPSKP PSKPGGDRYIPHRSAA K V Q D R Y 0 1 0 1 0 1 0 2 0 0 0 1 0 0 2 1 2 0 0 1 0 0 12 1 1241.6364 Q12834 Q12834 67 78 CDC20 Cell division cycle protein 20 homolog yes yes 2 0.0092502 100.02 By MS/MS By MS/MS 1 1 16131000 8706100 7425000 7209 1878 8060 18231;18232 16579;16580 16579 6778 2 VRASLSDLSSLDDVEGMSVR NPGLSKERVRASLSDL DVEGMSVRQLKEILAR R V R V R Q 1 2 0 3 0 0 1 1 0 0 3 0 1 0 0 5 0 0 0 3 0 0 20 1 2135.0528 A0A087WTM5;H7BYJ1;Q969K3 A0A087WTM5 59 78 RNF34 E3 ubiquitin-protein ligase RNF34 yes no 2;3 5.155E-10 102.97 By MS/MS By MS/MS 2 2 20278000 11899000 8379300 7210 26 8061 18233;18234;18235;18236 16581;16582;16583 16583 51;52 3 VRKLPSTTL SSILAQRRVRKLPSTT RKLPSTTL________ R V R T L - 0 1 0 0 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 1 0 0 9 2 1013.6233 E9PGT3;Q15418 E9PGT3 716 724 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 yes no 2 0.0071687 91.636 By matching By MS/MS 1 1 23502000 11583000 11919000 7211 796 8062 18237;18238 16584 16584 1429;6442 1 VRKSEPLDESDNDF SPTKPNRRVRKSEPLD LDESDNDF________ R V R D F - 0 1 1 3 0 0 2 0 0 0 1 1 0 1 1 2 0 0 0 1 0 0 14 2 1649.7533 J3KNW5;Q96AJ1 J3KNW5 419 432 CLUAP1 Clusterin-associated protein 1 yes no 2 0.026898 56.339 By MS/MS By matching 1 1 9945600 6067200 3878400 7212 1228 8063 18239;18240 16585 16585 2222 0 VRPASTGGLSLLPPPPGGK EGAAGNPRVRPASTGG LPPPPGGKTSTLIPPP R V R G K T 1 1 0 0 0 0 0 4 0 0 3 1 0 0 5 2 1 0 0 1 0 0 19 1 1800.0258 D6RB24;Q9NVZ3 D6RB24 116 134 NECAP2 Adaptin ear-binding coat-associated protein 2 yes no 3 3.5855E-05 81.51 By MS/MS 2 3915500 0 3915500 7213 657 8064 18241;18242 16586;16587 16586 1187;6391 2 VRVSPQDANPLMANGTLTR HVSAQLERVRVSPQDA MANGTLTRRHQNGRFV R V R T R R 2 2 2 1 0 1 0 1 0 0 2 0 1 0 2 1 2 0 0 2 0 0 19 1 2039.0582 C9JZR2;O60716 C9JZR2 44 62 CTNND1 Catenin delta-1 yes no 3 0.0046275 56.453 By MS/MS By matching 1 1 5499500 3225100 2274300 7214 624 8065 18243;18244 16588 16588 1141 1 VRYDSSNQVK KMNKSRQRVRYDSSNQ YDSSNQVK________ R V R V K - 0 1 1 1 0 1 0 0 0 0 0 1 0 0 0 2 0 0 1 2 0 0 10 1 1194.5993 A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8;O95983 A0A087WZ12 25 34 MBD3 Methyl-CpG-binding domain protein 3 yes no 2 0.0078628 75.788 By MS/MS 1 5145100 0 5145100 7215 20 8066 18245 16589 16589 44;45 1 VSAGEPGSHPSPAPR CRRGKEPKVSAGEPGS SHPSPAPRRSPAGNKQ K V S P R R 2 1 0 0 0 0 1 2 1 0 0 0 0 0 4 3 0 0 0 1 0 0 15 0 1444.7059 C9JME2;Q9Y4F1;A0A1B0GV68 C9JME2 417 431 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 2 9.5295E-15 133.23 By MS/MS By MS/MS 1 1 22287000 12354000 9933500 7216 600 8067 18246;18247 16590;16591 16590 1092 2 VSAQYLSEIEMAK EAKAKQEKVSAQYLSE LSEIEMAKAQRDYELK K V S A K A 2 0 0 0 0 1 2 0 0 1 1 1 1 0 0 2 0 0 1 1 0 0 13 0 1467.7279 A0A140T905;A2ABJ5;A0A140T9C3;A0A140T959;A0A140T9X0;A2AB12;A2AB09;A2AB10;A0A140T9R1;O75955 A0A140T905 41 53 FLOT1 Flotillin-1 yes no 2 0.0019709 79.23 By MS/MS By MS/MS 1 1 2408700 1449400 959280 7217 358 8068 18248;18249 16592;16593;16594 16594 7250 3 VSCHDSDDDIMR IGLGIKNRVSCHDSDD DSDDDIMRNDREYDSG R V S M R N 0 1 0 4 1 0 0 0 1 1 0 0 1 0 0 2 0 0 0 1 0 0 12 0 1448.566 Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4 360 371 NOL8 Nucleolar protein 8 yes no 3 0.025988 55.815 By MS/MS 1 0 0 0 7218 2194 8069 18250 16595 16595 1 VSDAVQPNNYLIR NTGVSKPRVSDAVQPN QPNNYLIRTEPEQGTL R V S I R T 1 1 2 1 0 1 0 0 0 1 1 0 0 0 1 1 0 0 1 2 0 0 13 0 1487.7732 A0A0D9SF60;H0YFB1;E7EST6;Q99569 Q99569 105 117 PKP4 Plakophilin-4 no no 2 9.9844E-08 126.31 By MS/MS By MS/MS 1 1 6361600 3938400 2423300 7219 314;2552 8070 18251;18252 16596;16597 16596 7239 2 VSDQNSPVLPK AYMLFYQRVSDQNSPV QNSPVLPKKSRVSVVR R V S P K K 0 0 1 1 0 1 0 0 0 0 1 1 0 0 2 2 0 0 0 2 0 0 11 0 1182.6245 Q9UPU5 Q9UPU5 2042 2052 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 1.8411E-14 169.58 By MS/MS By MS/MS 1 1 222270000 114560000 107700000 7220 2871 8071 18253;18254 16598;16599 16599 5933 2 VSDQNSPVLPKK AYMLFYQRVSDQNSPV NSPVLPKKSRVSVVRQ R V S K K S 0 0 1 1 0 1 0 0 0 0 1 2 0 0 2 2 0 0 0 2 0 0 12 1 1310.7194 Q9UPU5 Q9UPU5 2042 2053 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 3 0.001054 79.885 By MS/MS By MS/MS 1 1 11927000 4879800 7047600 7221 2871 8072 18255;18256 16600;16601 16600 5933 2 VSDSLTDLALK LSAQVNTKVSDSLTDL SLTDLALK________ K V S L K - 1 0 0 2 0 0 0 0 0 0 3 1 0 0 0 2 1 0 0 1 0 0 11 0 1160.6289 Q8N3C0 Q8N3C0 2192 2202 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.00016602 112.84 By MS/MS By MS/MS 1 1 4598600 1923200 2675400 7222 2303 8073 18257;18258 16602;16603 16603 4626 2 VSEPLLSATSASPTQVVSQLPMGR VPSPLEARVSEPLLSA VSQLPMGRDSREMLFL R V S G R D 2 1 0 0 0 2 1 1 0 0 3 0 1 0 3 5 2 0 0 3 0 0 24 0 2454.2788 W0Z7M9;E7ER32;A0A087X287;Q969V6 W0Z7M9 180 203 mkl1;MKL1 MKL/myocardin-like protein 1 yes no 3 0.00053265 59.918 By MS/MS By matching 1 1 40901000 26151000 14750000 7223 3015 8074 18259;18260 16604 16604 6214;6215 1 VSFELFADK VDGEPLGRVSFELFAD SFELFADKVPKTAENF R V S D K V 1 0 0 1 0 0 1 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 9 0 1054.5335 P62937;F8WE65;C9J5S7 P62937 20 28 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 2 0.0056648 95.502 By MS/MS By MS/MS 1 1 2657900 1744800 913180 7224 1806 8075 18261;18262 16605;16606 16605 2 VSFELFADKVPK VDGEPLGRVSFELFAD LFADKVPKTAENFRAL R V S P K T 1 0 0 1 0 0 1 0 0 0 1 2 0 2 1 1 0 0 0 2 0 0 12 1 1378.7497 P62937;F8WE65;C9J5S7 P62937 20 31 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 2 0.0047854 91.549 By MS/MS By MS/MS 1 1 4028500 2112400 1916100 7225 1806 8076 18263;18264 16607;16608 16607 2 VSGAGFSPSSK FGIIGNDRVSGAGFSP AGFSPSSKMEGGHFVP R V S S K M 1 0 0 0 0 0 0 2 0 0 0 1 0 1 1 4 0 0 0 1 0 0 11 0 1022.5033 Q9C0C2 Q9C0C2 1132 1142 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0012488 99.844 By MS/MS By matching 1 1 12254000 6259800 5993900 7226 2615 8077 18265;18266 16609 16609 5309 1 VSGEILLHISYCYK TGDYGNVKVSGEILLH LHISYCYKTGGLYIFV K V S Y K T 0 0 0 0 1 0 1 1 1 2 2 1 0 0 0 2 0 0 2 1 0 0 14 0 1680.8545 Q8TDW5 Q8TDW5 406 419 SYTL5 Synaptotagmin-like protein 5 yes yes 3 0.0289 40.577 By MS/MS 1 3906600 0 3906600 7227 2383 8078 18267 16610 16610 7811;7812 0 VSGRTSPPLLDR VPLSAYERVSGRTSPP TSPPLLDRARSRTPPS R V S D R A 0 2 0 1 0 0 0 1 0 0 2 0 0 0 2 2 1 0 0 1 0 0 12 1 1296.715 Q9UQ35 Q9UQ35 2393 2404 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.00036555 106.76 By MS/MS By MS/MS 2 3 251950000 128410000 123540000 7228 2877 8079 18268;18269;18270;18271;18272 16611;16612;16613;16614;16615 16612 7118 5 VSGSPSSGFR ETRSSFSRVSGSPSSG GSPSSGFRSQSWSRGS R V S F R S 0 1 0 0 0 0 0 2 0 0 0 0 0 1 1 4 0 0 0 1 0 0 10 0 979.47231 E7ESP9;P07197;E7EMV2 E7ESP9 27 36 NEFM Neurofilament medium polypeptide yes no 2 0.010564 70.728 By MS/MS By MS/MS 1 1 5951400 3241100 2710200 7229 734 8080 18273;18274 16616;16617 16616 1313 2 VSGTLDTPEKTVDSQGPTPVCTPTFLER VLRKKKKKVSGTLDTP CTPTFLERRKSQVAEL K V S E R R 0 1 0 2 1 1 2 2 0 0 2 1 0 1 4 2 6 0 0 3 0 0 28 1 3031.4808 H7BZL0;C9J808;Q9BYG3 H7BZL0 26 53 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 3 3.158E-06 74.63 By MS/MS By MS/MS 1 1 29595000 16788000 12808000 7230 566 8081 18275;18276 16618;16619 16619 6371;6372;6373 2 VSGVGGTTYEISV PTRGGVKKVSGVGGTT GTTYEISV________ K V S S V - 0 0 0 0 0 0 1 3 0 1 0 0 0 0 0 2 2 0 1 3 0 0 13 0 1267.6296 Q9C0B5;Q9ULC8 Q9C0B5 703 715 ZDHHC5;ZDHHC8 Palmitoyltransferase ZDHHC5;Probable palmitoyltransferase ZDHHC8 no no 2 0.0011621 88.177 By MS/MS By MS/MS 1 1 6467100 3976000 2491100 7231 2614;2840 8082 18277;18278 16620;16621 16620 7881 2 VSHAKNSTSTENKK V S K K 1 0 2 0 0 0 1 0 1 0 0 3 0 0 0 3 2 0 0 1 0 0 14 2 1529.7798 REV__Q96N64 yes yes 2 0.015429 51.643 By matching By MS/MS 1 1 67630000 40499000 27130000 + 7232 3009 8083 18279;18280 16622 16622 6202;6203 1 VSHGMNTGYAINPSR GILVVIIRVSHGMNTG GYAINPSRDLPPRIFT R V S S R D 1 1 2 0 0 0 0 2 1 1 0 0 1 0 1 2 1 0 1 1 0 0 15 0 1602.7573 F6QWF9 F6QWF9 123 137 yes yes 2 0.016193 49.62 By MS/MS 1 2845400 2845400 0 7233 900 8084 18281 16623 16623 1615;7405 1 VSHPQEPMLTASPR GGSHTGSKVSHPQEPM PMLTASPRMLLPSSSS K V S P R M 1 1 0 0 0 1 1 0 1 0 1 0 1 0 3 2 1 0 0 1 0 0 14 0 1548.7719 E9PSG0;O75052 E9PSG0 250 263 NOS1AP Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein yes no 3 0.0039699 64.298 By MS/MS 1 1665900 1665900 0 7234 843 8085 18282 16624 16624 1520 1 VSHSPPPK PSPPPKRRVSHSPPPK VSHSPPPKQRSSPVTK R V S P K Q 0 0 0 0 0 0 0 0 1 0 0 1 0 0 3 2 0 0 0 1 0 0 8 0 847.4552 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 644 651 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2 0.0097047 89.752 By matching By MS/MS 1 1 12100000 6789400 5310300 7235 442;1311 8086 18283;18284 16625 16625 856 1 VSHSPPPKQRSSPVTK PSPPPKRRVSHSPPPK QRSSPVTKRRSPSLSS R V S T K R 0 1 0 0 0 1 0 0 1 0 0 2 0 0 4 4 1 0 0 2 0 0 16 2 1730.9428 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 644 659 SRRM1 Serine/arginine repetitive matrix protein 1 no no 3 0.0021015 71.031 By MS/MS By MS/MS 1 1 16548000 9680500 6867400 7236 442;1311 8087 18285;18286 16626;16627 16626 856;866;867 2 VSIGNITLSPAISR MASLDELKVSIGNITL TLSPAISRHSPVQMNR K V S S R H 1 1 1 0 0 0 0 1 0 3 1 0 0 0 1 3 1 0 0 1 0 0 14 0 1426.8144 Q0JRZ9 Q0JRZ9 379 392 FCHO2 F-BAR domain only protein 2 yes yes 2 0.00081014 95.57 By MS/MS By MS/MS 1 1 5202300 2781600 2420800 7237 1872 8088 18287;18288 16628;16629 16628 3548 2 VSLEPHQGPGTPESK TTRQQRKRVSLEPHQG GPGTPESKKATSCFPR R V S S K K 0 0 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 15 0 1561.7736 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1974 1988 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 0.00029503 103.75 By MS/MS By MS/MS 2 2 178510000 88819000 89689000 7238 95 8089 18289;18290;18291;18292 16630;16631;16632;16633 16631 6240 4 VSLERLDLDLTADSQPPVFK GLMRKVPRVSLERLDL DSQPPVFKVFPGSTTE R V S F K V 1 1 0 3 0 1 1 0 0 0 4 1 0 1 2 2 1 0 0 2 0 0 20 1 2242.1845 Q13263;M0R0K9 Q13263 488 507 TRIM28 Transcription intermediary factor 1-beta yes no 3 5.9015E-05 76.161 By MS/MS By matching 1 1 17395000 13972000 3422500 7239 1908 8090 18293;18294 16634 16634 3656 1 VSLLGPVTTPEHQLLK TPQTPDIKVSLLGPVT TPEHQLLKTPSSSSLS K V S L K T 0 0 0 0 0 1 1 1 1 0 4 1 0 0 2 1 2 0 0 2 0 0 16 0 1730.9931 Q9H0H5 Q9H0H5 572 587 RACGAP1 Rac GTPase-activating protein 1 yes yes 2;3 0.0037328 79.346 By MS/MS By MS/MS 2 2 10133000 5621500 4511900 7240 2628 8091 18295;18296;18297;18298 16635;16636;16637 16637 7042;7043 3 VSLQKSTAVMLPK GRLRNQHKVSLQKSTA STAVMLPKTSPALPRD K V S P K T 1 0 0 0 0 1 0 0 0 0 2 2 1 0 1 2 1 0 0 2 0 0 13 1 1400.8061 Q6WRI0 Q6WRI0 1225 1237 IGSF10 Immunoglobulin superfamily member 10 no no 1 NaN 0 0 0 7241 2176 0 VSMPDVELNLKSPK FLSISSPKVSMPDVEL ELNLKSPKVKGDLDIA K V S P K V 0 0 1 1 0 0 1 0 0 0 2 2 1 0 2 2 0 0 0 2 0 0 14 1 1555.828 Q09666 Q09666 3415 3428 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2;3 8.9645E-13 135.23 By MS/MS By MS/MS 2 2 9596600 5388400 4208200 7242 1871 8092 18299;18300;18301;18302 16638;16639;16640;16641;16642 16638 3545 5 VSNLQVSPK DLEITDSKVSNLQVSP SNLQVSPKSEDISKFD K V S P K S 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 2 0 0 0 2 0 0 9 0 970.54475 A0A0C4DGF9;O00443 A0A0C4DGF9 253 261 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes no 2 0.00171 141.71 By MS/MS By MS/MS 1 1 25111000 12815000 12296000 7243 290 8093 18303;18304 16643;16644;16645 16643 516 3 VSNSPPLGR EKLPTSEKVSNSPPLG SNSPPLGRSKTQLSPS K V S G R S 0 1 1 0 0 0 0 1 0 0 1 0 0 0 2 2 0 0 0 1 0 0 9 0 925.49813 H0Y9Y2 H0Y9Y2 161 169 BOD1L1 yes yes 2 0.0080587 77.288 By MS/MS By MS/MS 1 1 7156700 4176500 2980200 7244 1048 8094 18305;18306 16646;16647;16648 16647 1951 3 VSPASPAGSPSADFAVHGESLGDR ALSDTDSRVSPASPAG HGESLGDRHLRTLQIS R V S D R H 4 1 0 2 0 0 1 3 1 0 1 0 0 1 3 5 0 0 0 2 0 0 24 0 2310.0877 A0A0A0MRP9;Q96C92 A0A0A0MRP9 189 212 SDCCAG3 Serologically defined colon cancer antigen 3 yes no 3 0.00023245 65.184 By MS/MS By matching 1 1 30840000 17177000 13663000 7245 197 8095 18307;18308 16649 16649 359;360 1 VSPGLPSPNLENGAPAVGPVQPR WSTASSQRVSPGLPSP AVGPVQPRTPSVSAPL R V S P R T 2 1 2 0 0 1 1 3 0 0 2 0 0 0 6 2 0 0 0 3 0 0 23 0 2252.1913 C9JRJ5;Q9UGP4 C9JRJ5 271 293 LIMD1 LIM domain-containing protein 1 yes no 2;3 0.00014008 71.309 By MS/MS By MS/MS 3 2 21578000 11600000 9977900 7246 605 8096;8097 18309;18310;18311;18312;18313 16650;16651;16652;16653;16654 16654 1104;1105 5 VSPLNLSSVTP ANNTPTRRVSPLNLSS LNLSSVTP________ R V S T P - 0 0 1 0 0 0 0 0 0 0 2 0 0 0 2 3 1 0 0 2 0 0 11 0 1112.6077 Q9UJX2 Q9UJX2 587 597 CDC23 Cell division cycle protein 23 homolog yes yes 2 0.010439 90.434 By MS/MS By matching 1 1 7633300 4720100 2913200 7247 2821 8098 18314;18315 16655 16655 5800;7088 1 VSPSDTTPLVSR TPQDYEMRVSPSDTTP DTTPLVSRSVPPVKLE R V S S R S 0 1 0 1 0 0 0 0 0 0 1 0 0 0 2 3 2 0 0 2 0 0 12 0 1257.6565 Q9HCK8 Q9HCK8 2045 2056 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 2 0.0028294 86.014 By matching By MS/MS 1 1 22553000 11445000 11108000 7248 2694 8099 18316;18317 16656;16657 16657 5502 2 VSPSTSYTPSR YVNANQARVSPSTSYT STSYTPSRHKRSYEDD R V S S R H 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 1 1 0 0 11 0 1180.5724 Q9BTE3 Q9BTE3 153 163 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 2 0.0073937 95.183 By MS/MS By MS/MS 1 1 14951000 7477900 7473200 7249 2577 8100 18318;18319 16658;16659 16658 7027 2 VSQSALNPHQSPDFK RYPGKFYRVSQSALNP PHQSPDFKRSPRDLHQ R V S F K R 1 0 1 1 0 2 0 0 1 0 1 1 0 1 2 3 0 0 0 1 0 0 15 0 1653.8111 Q9NYL2 Q9NYL2 717 731 ZAK Mitogen-activated protein kinase kinase kinase MLT yes yes 2 0.0022059 74.428 By matching By MS/MS 1 1 6028800 2768700 3260100 7250 2760 8101 18320;18321 16660 16660 5665 1 VSQSALNPHQSPDFKR RYPGKFYRVSQSALNP HQSPDFKRSPRDLHQP R V S K R S 1 1 1 1 0 2 0 0 1 0 1 1 0 1 2 3 0 0 0 1 0 0 16 1 1809.9122 Q9NYL2 Q9NYL2 717 732 ZAK Mitogen-activated protein kinase kinase kinase MLT yes yes 3 7.0278E-05 88.282 By MS/MS By MS/MS 1 1 10005000 5575300 4429700 7251 2760 8102 18322;18323 16661;16662 16661 5665 2 VSSDNVADLHEKYSGSTP VREDGWIRVSSDNVAD EKYSGSTP________ R V S T P - 1 0 1 2 0 0 1 1 1 0 1 1 0 0 1 4 1 0 1 2 0 0 18 1 1904.8752 P28074 P28074 246 263 PSMB5 Proteasome subunit beta type-5 yes yes 2 0.00032086 78.903 By MS/MS By MS/MS 1 1 22740000 10993000 11747000 7252 1640 8103 18324;18325 16663;16664 16663 3030 2 VSSGVYEPVVIESH SGIQLATRVSSGVYEP EPVVIESH________ R V S S H - 0 0 0 0 0 0 2 1 1 1 0 0 0 0 1 3 0 0 1 4 0 0 14 0 1500.746 Q5T9C2 Q5T9C2 371 384 FAM102A Protein FAM102A yes yes 2 0.0025364 68.847 By MS/MS By MS/MS 1 1 2325600 1187600 1138000 7253 2104 8104 18326;18327 16665;16666 16665 7744 2 VSSLLNR ________________ KVSSLLNRMANYTNLT K V S N R M 0 1 1 0 0 0 0 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 7 0 787.4552 H0YNJ5;H0YKE6;H0YMQ9;H0YKQ8;B3KXX3;Q9UHW9 H0YNJ5 7 13 SLC12A6 Solute carrier family 12 member 6 yes no 2 0.0069625 104.44 By MS/MS By MS/MS 1 1 2689300 1474800 1214500 7254 476 8105 18328;18329 16667;16668 16668 906 2 VSSPLPSPSAMTDAANSQAAAK IQPGTVNRVSSPLPSP ANSQAAAKLALRKQLE R V S A K L 6 0 1 1 0 1 0 0 0 0 1 1 1 0 3 5 1 0 0 1 0 0 22 0 2100.0157 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 316 337 GATAD2B Transcriptional repressor p66-beta yes no 2;3 1.4732E-08 89.136 By MS/MS By MS/MS 6 6 99698000 60956000 38742000 7255 352 8106;8107;8108 18330;18331;18332;18333;18334;18335;18336;18337;18338;18339;18340;18341 16669;16670;16671;16672;16673;16674;16675;16676;16677;16678;16679;16680;16681;16682;16683;16684 16675 37 654;655;656;657 16 VSSPLSPLSPGIK SHSPTPGKVSSPLSPL SPLSPGIKSPTIPRAE K V S I K S 0 0 0 0 0 0 0 1 0 1 2 1 0 0 3 4 0 0 0 1 0 0 13 0 1280.734 Q9P2B4 Q9P2B4 555 567 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 2 0.003623 78.191 By MS/MS By MS/MS 1 1 6323700 3818600 2505100 7256 2786 8109 18342;18343 16685;16686 16685 5721 2 VSSPLSPLSPGIKSPTIPR SHSPTPGKVSSPLSPL IKSPTIPRAERGNPPP K V S P R A 0 1 0 0 0 0 0 1 0 2 2 1 0 0 5 5 1 0 0 1 0 0 19 1 1932.1044 Q9P2B4 Q9P2B4 555 573 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 3 1.529E-05 83.751 By MS/MS By MS/MS 1 1 7398500 3998100 3400400 7257 2786 8110 18344;18345 16687;16688 16687 5721;5722 2 VSSPVFGATSSIK PQEELPTRVSSPVFGA FGATSSIKSGLDLNTS R V S I K S 1 0 0 0 0 0 0 1 0 1 0 1 0 1 1 4 1 0 0 2 0 0 13 0 1278.682 F6Q6H0;I6L8A6;Q99708 F6Q6H0 325 337 RBBP8 DNA endonuclease RBBP8 yes no 2 0.0028552 82.489 By MS/MS By MS/MS 1 1 23077000 10872000 12205000 7258 899 8111 18346;18347 16689;16690 16690 1614 2 VSSQAEDTSSSFDNLFIDR SEHHPRHRVSSQAEDT FDNLFIDRLQRITIAD R V S D R L 1 1 1 3 0 1 1 0 0 1 1 0 0 2 0 5 1 0 0 1 0 0 19 0 2116.9549 H8Y6P7;Q9BZD3;P0CAP2 H8Y6P7 574 592 GCOM1;GCOM2;POLR2M Putative GRINL1B complex locus protein 2;DNA-directed RNA polymerase II subunit GRINL1A yes no 2 1.441E-13 121.76 By MS/MS By MS/MS 1 1 15663000 7630900 8031800 7259 1191 8112 18348;18349 16691;16692 16691 2158;2159 2 VSSQGNLIPARPAPAPPLYSSLT RPPPPQPKVSSQGNLI PPLYSSLT________ K V S L T - 3 1 1 0 0 1 0 1 0 1 3 0 0 0 5 4 1 0 1 1 0 0 23 1 2335.2536 Q13443;A0A0J9YY58 Q13443 797 819 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes no 2 0.00045324 70.529 By matching By MS/MS 1 1 31719000 20745000 10974000 7260 1917 8113 18350;18351 16693 16693 3695;3696 1 VSSQSFSEIER KKGLGAQKVSSQSFSE QSFSEIERQAQVAEKL K V S E R Q 0 1 0 0 0 1 2 0 0 1 0 0 0 1 0 4 0 0 0 1 0 0 11 0 1267.6044 Q8N6H7;A0A0D9SF70;G5E9L0;E9PIY6;E9PQP3 Q8N6H7 236 246 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 2 4.89E-06 128.21 By MS/MS By MS/MS 1 1 7592100 4137800 3454300 7261 2321 8114 18352;18353 16694;16695 16695 4660 2 VSTAAEHNSSSLK HEGDMSLRVSTAAEHN EHNSSSLKQNPAAAVA R V S L K Q 2 0 1 0 0 0 1 0 1 0 1 1 0 0 0 4 1 0 0 1 0 0 13 0 1329.6525 D6RIA3 D6RIA3 556 568 LOC285556 yes yes 2 0.0019447 81.95 By matching By MS/MS 1 1 3179800 1066700 2113000 7262 683 8115 18354;18355 16696 16696 1206;1207;1208 0 VSTGALMTPNTRIQR KPFVTWTKVSTGALMT TPNTRIQRFEVLKNGT K V S Q R F 1 2 1 0 0 1 0 1 0 1 1 0 1 0 1 1 3 0 0 1 0 0 15 1 1643.8777 Q9NR99 Q9NR99 1890 1904 MXRA5 Matrix-remodeling-associated protein 5 yes yes 2 0.0035815 58.676 By matching By MS/MS 1 1 165100000 91374000 73722000 7263 2718 8116 18356;18357 16697 16697 357 5550;7063 1 VSTGDTSPCGTEEDSSPASPMHER HAEMAVSRVSTGDTSP PASPMHERVTSFSTPP R V S E R V 1 1 0 2 1 0 3 2 1 0 0 0 1 0 3 5 3 0 0 1 0 0 24 0 2533.0333 B0QY16;Q6ICG6 B0QY16 146 169 KIAA0930 Uncharacterized protein KIAA0930 yes no 3 0.0014919 56.332 By MS/MS By matching 1 1 16161000 7770300 8390500 7264 443 8117 18358;18359 16698 16698 870 1 VSTTTDSPVSPAQAASPFIPLDELSSK SSCNSPAKVSTTTDSP PLDELSSK________ K V S S K - 3 0 0 2 0 1 1 0 0 1 2 1 0 1 4 6 3 0 0 2 0 0 27 0 2744.3756 Q96E09 Q96E09 261 287 FAM122A Protein FAM122A yes yes 3 0.012784 43.895 By MS/MS 1 15405000 0 15405000 7265 2476 8118 18360 16699 16699 4995 1 VSVSPGR SNRTRKSRVSVSPGRT RVSVSPGRTSGKVTKH R V S G R T 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 2 0 0 0 2 0 0 7 0 700.38679 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 423 429 SRRM1 Serine/arginine repetitive matrix protein 1 no no 2 0.0057081 109.48 By MS/MS By matching 1 1 11361000 5809000 5551800 7266 442;1311 8119 18361;18362 16700;16701 16701 861;862;2355;2356 2 VTADVINAAEK LIVRSATKVTADVINA DVINAAEKLQVVGRAG K V T E K L 3 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 11 0 1129.5979 Q5SZU1;O43175 Q5SZU1 25 35 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.0028513 95.775 By MS/MS By MS/MS 1 1 7173000 3239700 3933300 7267 1373 8120 18363;18364 16702;16703 16703 2 VTAEADSSSPTGILATSESK ERILRRRKVTAEADSS ILATSESKSMPVLGSV K V T S K S 3 0 0 1 0 0 2 1 0 1 1 1 0 0 1 5 3 0 0 1 0 0 20 0 1949.9429 A0MZ66 A0MZ66 486 505 KIAA1598 Shootin-1 yes yes 2 0.010941 54.276 By MS/MS 1 3966500 3966500 0 7268 389 8121 18365 16704;16705 16705 742;743;744 2 VTDALPEPEPPGAMAASEDEEEEEEALEAMQSR ALGKAPSKVTDALPEP ALEAMQSRLATLRS__ K V T S R L 6 1 0 2 0 1 10 1 0 0 2 0 2 0 4 2 1 0 0 1 0 0 33 0 3556.5345 Q9Y3E7 Q9Y3E7 184 216 CHMP3 Charged multivesicular body protein 3 yes yes 3;4 1.1229E-11 81.967 By MS/MS By matching 3 1 100850000 91574000 9275000 7269 2907 8122;8123 18366;18367;18368;18369 16706;16707;16708 16707 382 6051 3 VTDKVLTANSNPSSPSAAKR ADKRKRSRVTDKVLTA SSPSAAKRRRT_____ R V T K R R 3 1 2 1 0 0 0 0 0 0 1 2 0 0 2 4 2 0 0 2 0 0 20 2 2042.0756 Q9NV56 Q9NV56 182 201 MRGBP MRG/MORF4L-binding protein yes yes 3 0.010703 50.944 By MS/MS By matching 1 1 8352800 4695300 3657400 7270 2737 8124 18370;18371 16709 16709 5602;5603 1 VTEGTIREEQEYEEEVEEEPRPAAK GEYRPHHRVTEGTIRE EEPRPAAKVVEREEAV R V T A K V 2 2 0 0 0 1 10 1 0 1 0 1 0 0 2 0 2 0 1 2 0 0 25 2 2946.3731 O43491;E9PK52;E9PHY5;H0Y5B0;E9PMV8;Q6R5J7 O43491 762 786 EPB41L2 Band 4.1-like protein 2 yes no 3;4 3.7878E-26 121.35 By MS/MS By MS/MS 2 2 107870000 60222000 47645000 7271 1387 8125 18372;18373;18374;18375 16710;16711;16712;16713;16714 16710 6618;7522 5 VTGDLFYTHVTTMGQR SGLALDHKVTGDLFYT HVTTMGQRLSQKAPSL K V T Q R L 0 1 0 1 0 1 0 2 1 0 1 0 1 1 0 0 4 0 1 2 0 0 16 0 1824.8829 E9PJ68;O75387 E9PJ68 214 229 SLC43A1 Large neutral amino acids transporter small subunit 3 yes no 3 9.5537E-07 115.09 By MS/MS By MS/MS 1 1 2545500 2545500 0 7272 809 8126 18376;18377 16715;16716 16715 7386 2 VTIADDYSDPFDAK SGAGKKDKVTIADDYS YSDPFDAKNDLKSKAG K V T A K N 2 0 0 4 0 0 0 0 0 1 0 1 0 1 1 1 1 0 1 1 0 0 14 0 1555.7042 Q15464 Q15464 240 253 SHB SH2 domain-containing adapter protein B yes yes 2 0.014588 56.548 By MS/MS By matching 1 1 2308800 1302600 1006300 7273 1992 8127 18378;18379 16717 16717 7719 0 VTIAQGGVLPNIQAVLLPK ELNKLLGKVTIAQGGV IQAVLLPKKTESHHKA K V T P K K 2 0 1 0 0 2 0 2 0 2 3 1 0 0 2 0 1 0 0 3 0 0 19 0 1930.1615 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9 A0A0U1RR32 101 119 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A yes no 2;3 1.599E-06 103.88 By MS/MS By MS/MS 2 1 25873000 21536000 4336600 7274 348 8128 18380;18381;18382 16718;16719;16720 16720 3 VTKNEEPSEEEIDAPKPK VVSSKTKKVTKNEEPS EIDAPKPKKMKKEKEM K V T P K K 1 0 1 1 0 0 5 0 0 1 0 3 0 0 3 1 1 0 0 1 0 0 18 2 2039.0059 Q9NR30 Q9NR30 114 131 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.0014011 70.15 By MS/MS By matching 1 1 45435000 26879000 18556000 7275 2716 8129 18383;18384 16721 16721 5548 1 VTKSPAPVHR GFRNRQQRVTKSPAPV KSPAPVHRGNSSSPAP R V T H R G 1 1 0 0 0 0 0 0 1 0 0 1 0 0 2 1 1 0 0 2 0 0 10 1 1090.6247 Q9NRA8;B1AKL4;B0QYZ7 Q9NRA8 667 676 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 3 0.030178 51.445 By MS/MS 1 3554500 0 3554500 7276 2719 8130 18385 16722 16722 0 VTLATLK NYEGSPIKVTLATLKM KVTLATLKMSVQPTVS K V T L K M 1 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 2 0 0 1 0 0 7 0 744.47454 P06748;E5RI98 P06748 74 80 NPM1 Nucleophosmin no no 2 0.011418 106.42 By MS/MS By matching 1 1 5660900 2691000 2969900 7277 1533;699 8131 18386;18387 16723 16723 1 VTLTSEEEAR NGISDLVKVTLTSEEE LTSEEEARLKKSADTL K V T A R L 1 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 10 0 1133.5564 P00338 P00338 306 315 LDHA L-lactate dehydrogenase A chain yes yes 2 5.4309E-05 122.33 By MS/MS By MS/MS 1 1 13778000 7296600 6481100 7278 1509 8132 18388;18389 16724;16725 16725 2 VTLYNTDQDGSDSPR AINTVTNKVTLYNTDQ QDGSDSPRSSLNNSLS K V T P R S 0 1 1 3 0 1 0 1 0 0 1 0 0 0 1 2 2 0 1 1 0 0 15 0 1666.7435 C9JXI1;C9JVP0;Q9UPW0 C9JXI1 22 36 FOXJ3 Forkhead box protein J3 yes no 2 2.4385E-35 166.62 By MS/MS By MS/MS 1 1 34603000 19783000 14820000 7279 610 8133 18390;18391 16726;16727;16728 16726 1115 3 VTNDISPESSPGVGR FGVESDKRVTNDISPE ESSPGVGRRRTKTPHT R V T G R R 0 1 1 1 0 0 1 2 0 1 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1513.7372 A6NNN6;E7ETA6;Q15154;E5RGQ4;E9PGW9;E7EV93 A6NNN6 60 74 PCM1 Pericentriolar material 1 protein yes no 2 9.5597E-69 194.32 By MS/MS By MS/MS 3 3 105710000 57744000 47970000 7280 423 8134;8135 18392;18393;18394;18395;18396;18397 16729;16730;16731;16732;16733;16734;16735 16731 795;796;797 7 VTPPEGYEVVTVFPK CEKHARERVTPPEGYE EVVTVFPK________ R V T P K - 0 0 0 0 0 0 2 1 0 0 0 1 0 1 3 0 2 0 1 4 0 0 15 0 1660.8712 O00151 O00151 315 329 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 7.1213E-07 119.27 By MS/MS By MS/MS 1 1 84061000 42071000 41990000 7281 1321 8136 18398;18399 16736;16737;16738 16737 7494 3 VTQHESDNENEIQIQNK DSLEVERRVTQHESDN NEIQIQNKLKKDFPKQ R V T N K L 0 0 3 1 0 3 3 0 1 2 0 1 0 0 0 1 1 0 0 1 0 0 17 0 2024.9399 Q5VZL5 Q5VZL5 117 133 ZMYM4 Zinc finger MYM-type protein 4 yes yes 2;3 6.8585E-103 212.85 By MS/MS By MS/MS 2 1 120990000 73998000 46997000 7282 2125 8137 18400;18401;18402 16739;16740;16741 16740 4228 3 VTSFSTPPTPER PASPMHERVTSFSTPP STPPTPERNNRPAFFS R V T E R N 0 1 0 0 0 0 1 0 0 0 0 0 0 1 3 2 3 0 0 1 0 0 12 0 1317.6565 B0QY16;Q6ICG6 B0QY16 170 181 KIAA0930 Uncharacterized protein KIAA0930 yes no 2 0.004825 101.3 By MS/MS By matching 1 1 19340000 10400000 8940200 7283 443 8138 18403;18404 16742 16742 6340 1 VTSGGVSESPSGFSK KKGAKRPRVTSGGVSE ESPSGFSKHIQSNLDF R V T S K H 0 0 0 0 0 0 1 3 0 0 0 1 0 1 1 5 1 0 0 2 0 0 15 0 1424.6783 J3KN87;E7EPP6;O14757 J3KN87 278 292 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 5.07E-121 225.21 By MS/MS By MS/MS 1 1 182660000 96814000 85849000 7284 716 8139 18405;18406 16743;16744 16743 1276 2 VTSLANLISPVR KRVRPLARVTSLANLI ANLISPVRNGAVRRFG R V T V R N 1 1 1 0 0 0 0 0 0 1 2 0 0 0 1 2 1 0 0 2 0 0 12 0 1268.7452 Q7Z628 Q7Z628 98 109 NET1 Neuroepithelial cell-transforming gene 1 protein yes yes 2 0.0008297 104.55 By MS/MS By MS/MS 1 1 2575000 1329800 1245200 7285 2223 8140 18407;18408 16745;16746 16746 4450 2 VTSPTTYVLDEDEPR DLIESSCKVTSPTTYV VLDEDEPRFLEEVDYS K V T P R F 0 1 0 2 0 0 2 0 0 0 1 0 0 0 2 1 3 0 1 2 0 0 15 0 1720.8156 J3KNS1;Q9UPW5 J3KNS1 1218 1232 AGTPBP1 Cytosolic carboxypeptidase 1 yes no 2 0.0027604 68.676 By MS/MS 1 6652900 0 6652900 7286 1227 8141 18409 16747 16747 2221 1 VTSRGPDEEAVVDLGK QMRPLLTRVTSRGPDE EAVVDLGKTSSTVNTK R V T G K T 1 1 0 2 0 0 2 2 0 0 1 1 0 0 1 1 1 0 0 3 0 0 16 1 1670.8475 E9PFN4 E9PFN4 17 32 SLC4A7 Anion exchange protein yes yes 2 0.0026052 84.829 By MS/MS By matching 1 1 13951000 7971300 5979900 7287 782 8142 18410;18411 16748 16748 1407;6438 1 VTSSMSSPSMQPK ETLPANFRVTSSMSSP SSPSMQPKKMQMDGNV R V T P K K 0 0 0 0 0 1 0 0 0 0 0 1 2 0 2 5 1 0 0 1 0 0 13 0 1365.6268 Q13136 Q13136 1166 1178 PPFIA1 Liprin-alpha-1 yes yes 2 0.0058202 68.893 By MS/MS By MS/MS 1 1 3679600 2806600 872990 7288 1899 8143 18412;18413 16749;16750 16749 249 3629;3630;3631 2 VTVSRASSSR LSPSPSSRVTVSRASS VSRASSSRSVRTTRGK R V T S R S 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 2 0 0 10 1 1048.5625 P20700 P20700 398 407 LMNB1 Lamin-B1 yes yes 2 2.4481E-05 128.08 By MS/MS By MS/MS 1 1 258880000 155390000 103490000 7289 1612 8144 18414;18415 16751;16752;16753;16754 16752 2977 4 VVASDKETYELRYFQISQDEDESESED NNLRDWLRVVASDKET EDESESED________ R V V E D - 1 1 0 4 0 2 6 0 0 1 1 1 0 1 0 4 1 0 2 2 0 0 27 2 3210.4001 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 95 121 RPL22L1 60S ribosomal protein L22-like 1 yes no 3 0.0099297 47.648 By MS/MS 1 9823800 9823800 0 7290 619 8145 18416 16755 16755 1125;1126 1 VVDLLAPYAK EILVTGIKVVDLLAPY DLLAPYAKGGKIGLFG K V V A K G 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 2 0 0 10 0 1087.6277 P06576;H0YH81;F8W079 P06576 189 198 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 0.0072671 82.452 By MS/MS 1 0 0 0 7291 1531 8146 18417 16756 16756 1 VVDVLDSIK SAKPGLQKVVDVLDSI VDVLDSIKTKGKSADF K V V I K T 0 0 0 2 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 3 0 0 9 0 986.56481 P00918 P00918 159 167 CA2 Carbonic anhydrase 2 yes yes 2 0.007417 104.06 By MS/MS By MS/MS 1 1 2805300 1261100 1544200 7292 1514 8147 18418;18419 16757;16758 16757 2 VVDYSQFQESDDADEDYGR SRPVRNRKVVDYSQFQ DADEDYGRDSGPPTKK K V V G R D 1 1 0 5 0 2 2 1 0 0 0 0 0 1 0 2 0 0 2 2 0 0 19 0 2236.9033 Q9H1E3 Q9H1E3 10 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 4.0976E-116 215.49 By MS/MS By MS/MS 23 25 5194900000 2803900000 2390900000 7293 2637 8148;8149 18420;18421;18422;18423;18424;18425;18426;18427;18428;18429;18430;18431;18432;18433;18434;18435;18436;18437;18438;18439;18440;18441;18442;18443;18444;18445;18446;18447;18448;18449;18450;18451;18452;18453;18454;18455;18456;18457;18458;18459;18460;18461;18462;18463;18464;18465;18466;18467 16759;16760;16761;16762;16763;16764;16765;16766;16767;16768;16769;16770;16771;16772;16773;16774;16775;16776;16777;16778;16779;16780;16781;16782;16783;16784;16785;16786;16787;16788;16789;16790;16791;16792;16793;16794;16795;16796;16797;16798;16799;16800;16801;16802;16803;16804;16805;16806;16807;16808;16809;16810;16811 16760 5375;5376;7886 49 VVDYSQFQESDDADEDYGRDSGPPTK SRPVRNRKVVDYSQFQ RDSGPPTKKIRSSPRE K V V T K K 1 1 0 6 0 2 2 2 0 0 0 1 0 1 2 3 1 0 2 2 0 0 26 1 2919.2319 Q9H1E3 Q9H1E3 10 35 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3;4 4.5371E-08 83.247 By MS/MS By MS/MS 2 3 1448600000 746990000 701590000 7294 2637 8150;8151 18468;18469;18470;18471;18472 16812;16813;16814;16815;16816 16812 5375;5376;7886 5 VVDYSQFQESDDADEDYGRDSGPPTKK SRPVRNRKVVDYSQFQ DSGPPTKKIRSSPREA K V V K K I 1 1 0 6 0 2 2 2 0 0 0 2 0 1 2 3 1 0 2 2 0 0 27 2 3047.3268 Q9H1E3 Q9H1E3 10 36 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3;4;5 0.00014846 65.064 By MS/MS By MS/MS 4 4 4426100000 2588700000 1837400000 7295 2637 8152;8153 18473;18474;18475;18476;18477;18478;18479;18480 16817;16818;16819;16820;16821 16817 5375;5376;7886 5 VVEAVNSDSDSEFGIPK KRAPKQKKVVEAVNSD DSEFGIPKKTTTPKGK K V V P K K 1 0 1 2 0 0 2 1 0 1 0 1 0 1 1 3 0 0 0 3 0 0 17 0 1791.8527 Q02880 Q02880 1516 1532 TOP2B DNA topoisomerase 2-beta yes yes 2;3 9.2002E-33 164.58 By MS/MS By MS/MS 4 5 327540000 172320000 155220000 7296 1842 8154;8155;8156 18481;18482;18483;18484;18485;18486;18487;18488;18489 16822;16823;16824;16825;16826;16827;16828;16829;16830;16831;16832;16833 16824 3451;3452;3453 11 VVEAVNSDSDSEFGIPKK KRAPKQKKVVEAVNSD SEFGIPKKTTTPKGKG K V V K K T 1 0 1 2 0 0 2 1 0 1 0 2 0 1 1 3 0 0 0 3 0 0 18 1 1919.9476 Q02880 Q02880 1516 1533 TOP2B DNA topoisomerase 2-beta yes yes 2 0.00079869 79.347 By MS/MS By MS/MS 1 1 28400000 15267000 13133000 7297 1842 8157 18490;18491 16834;16835 16835 3451;3452;3453 2 VVEAVNSDSDSEFGIPKKTTTPK KRAPKQKKVVEAVNSD PKKTTTPKGKGRGAKK K V V P K G 1 0 1 2 0 0 2 1 0 1 0 3 0 1 2 3 3 0 0 3 0 0 23 2 2448.2384 Q02880 Q02880 1516 1538 TOP2B DNA topoisomerase 2-beta yes yes 3 0.0023805 57.826 By MS/MS By MS/MS 2 2 121050000 70117000 50929000 7298 1842 8158;8159 18492;18493;18494;18495 16836;16837;16838 16837 3451;3452;3453 3 VVFEQTK REAGITEKVVFEQTKV KVVFEQTKVIADNVKD K V V T K V 0 0 0 0 0 1 1 0 0 0 0 1 0 1 0 0 1 0 0 2 0 0 7 0 849.45962 P60174;U3KQF3;U3KPZ0 P60174 180 186 TPI1 Triosephosphate isomerase yes no 2 8.5146E-17 143.37 By MS/MS By MS/MS 1 1 1405200 1405200 0 7299 1781 8160 18496;18497 16839;16840 16840 2 VVGGSLR QDTEVRSRVVGGSLRG RVVGGSLRGAQAASPA R V V L R G 0 1 0 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 686.40752 P18031;B4DSN5 P18031 374 380 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 2 0.0084065 101.72 By MS/MS By MS/MS 1 1 22310000 10995000 11315000 7300 1598 8161 18498;18499 16841;16842 16841 2936 2 VVGKPAQLGTQRSQEADVQDWEFR GVLTAQDRVVGKPAQL DVQDWEFRKRDSQGTY R V V F R K 2 2 0 2 0 4 2 2 0 0 1 1 0 1 1 1 1 1 0 3 0 0 24 2 2743.3678 Q9C0C2 Q9C0C2 824 847 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 4 4.2522E-06 76.533 By MS/MS By MS/MS 1 1 8671100 5045800 3625300 7301 2615 8162 18500;18501 16843;16844 16843 5303;7037 2 VVHASGDASYSAGDSGDAAAQPAFTGIK TVLVEERRVVHASGDA QPAFTGIKGKEGSALT R V V I K G 7 0 0 3 0 1 0 4 1 1 0 1 0 1 1 4 1 0 1 2 0 0 28 0 2649.2307 A0A0A0MRA8;A0A0A0MSA4;A8K968;A0A0J9YY18;A0A0J9YW31;Q9Y2J2 A0A0A0MRA8 694 721 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 3 0.00023309 61.109 By matching By MS/MS 1 1 6009700 3395200 2614500 7302 175;2891 8163 18502;18503 16845 16845 313 1 VVKNTSGKTR TANQSFRKVVKNTSGK KNTSGKTR________ K V V T R - 0 1 1 0 0 0 0 1 0 0 0 2 0 0 0 1 2 0 0 2 0 0 10 2 1088.6302 J3KRH6 J3KRH6 90 99 ROCK1 yes yes 2 0.027795 44.299 By MS/MS 1 0 0 0 7303 1239 8164 18504 16846 16846 1 VVLASASPR IGKLLHKRVVLASASP VLASASPRRQEILSNA R V V P R R 2 1 0 0 0 0 0 0 0 0 1 0 0 0 1 2 0 0 0 2 0 0 9 0 898.52362 O95671 O95671 15 23 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 2 0.0045711 87.568 By matching By MS/MS 1 1 7902400 4615000 3287400 7304 1494 8165 18505;18506 16847 16847 2770 1 VVLAYEPVWAIGTGK DNVKDWSKVVLAYEPV VWAIGTGKTATPQQAQ K V V G K T 2 0 0 0 0 0 1 2 0 1 1 1 0 0 1 0 1 1 1 3 0 0 15 0 1601.8817 P60174;U3KQF3;U3KPZ0 P60174 198 212 TPI1 Triosephosphate isomerase yes no 2 3.6174E-06 118.48 By MS/MS By MS/MS 1 1 23621000 14469000 9151600 7305 1781 8166 18507;18508 16848;16849 16848 2 VVLHDGDPNEPVSDYINANIIMPEFETK ILPFDHTRVVLHDGDP IMPEFETKCNNSKPKK R V V T K C 1 0 3 3 0 0 3 1 1 3 1 1 1 1 3 1 1 0 1 3 0 0 28 0 3155.5121 Q06124 Q06124 290 317 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 3 0.0083504 43.206 By MS/MS By MS/MS 1 2 40520000 34798000 5722400 7306 1856 8167;8168 18509;18510;18511 16850;16851 16851 238 3495;7669 2 VVLIVGETGSGK VKIIKENKVVLIVGET VGETGSGKTTQIPQFL K V V G K T 0 0 0 0 0 0 1 3 0 1 1 1 0 0 0 1 1 0 0 3 0 0 12 0 1157.6656 Q9H6S0;D6RA70 Q9H6S0 211 222 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes no 1 0.028502 43.442 By MS/MS 1 1626300 1626300 0 7307 2669 8169 18512 16852 16852 0 VVLKSDTEQSEDNNE GYSKVIKRVVLKSDTE EQSEDNNE________ R V V N E - 0 0 2 2 0 1 3 0 0 0 1 1 0 0 0 2 1 0 0 2 0 0 15 1 1705.7643 I6L894;Q01484;E9PCH6 I6L894 3910 3924 ANK2 Ankyrin-2 yes no 2 0.018902 72.34 By MS/MS By matching 1 1 8702800 4326800 4376100 7308 1217 8170 18513;18514 16853 16853 1 VVLNMNLTPTQGSYTFDPVTK TVTVHMPKVVLNMNLT YTFDPVTKVLTWDVGK K V V T K V 0 0 2 1 0 1 0 1 0 0 2 1 1 1 2 1 4 0 1 3 0 0 21 0 2324.1722 Q9Y2T2 Q9Y2T2 317 337 AP3M1 AP-3 complex subunit mu-1 yes yes 3 0.028216 42.633 By MS/MS 1 0 0 0 7309 2894 8171 18515 16854 16854 7951 1 VVLPSPK V V P K 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 2 0 0 7 0 738.46398 REV__Q92859 yes yes 2 0.011331 98.582 By MS/MS By MS/MS 2 2 34836000 17789000 17047000 + 7310 3006 8172 18516;18517;18518;18519 16855;16856;16857;16858 16857 6199 4 VVNANQNASPNVPGK LKIATAAKVVNANQNA ASPNVPGKRGRPRKLK K V V G K R 2 0 4 0 0 1 0 1 0 0 0 1 0 0 2 1 0 0 0 3 0 0 15 0 1507.7743 Q8IWI9;H3BP52;H3BTF4 Q8IWI9 599 613 MGA MAX gene-associated protein yes no 2 1.8107E-07 98.754 By MS/MS By MS/MS 1 1 5507400 3544200 1963200 7311 2268 8173 18520;18521 16859;16860 16859 4554 1 VVNANQNASPNVPGKR LKIATAAKVVNANQNA SPNVPGKRGRPRKLKL K V V K R G 2 1 4 0 0 1 0 1 0 0 0 1 0 0 2 1 0 0 0 3 0 0 16 1 1663.8754 Q8IWI9;H3BP52;H3BTF4 Q8IWI9 599 614 MGA MAX gene-associated protein yes no 3 0.00012284 83.891 By matching By MS/MS 1 1 17495000 7626100 9869300 7312 2268 8174 18522;18523 16861 16861 4554 1 VVNGAAASQPPSKR KAKAGELKVVNGAAAS ASQPPSKRKRRWDQTA K V V K R K 3 1 1 0 0 1 0 1 0 0 0 1 0 0 2 2 0 0 0 2 0 0 14 1 1380.7474 O75533 O75533 183 196 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0018599 86.772 By MS/MS By MS/MS 3 3 21996000 13037000 8959700 7313 1443 8175;8176 18524;18525;18526;18527;18528;18529 16862;16863;16864;16865;16866 16863 2668;2669 5 VVNISSMLGRMANPAR CPQLSRGRVVNISSML GRMANPARSPYCITKF R V V A R S 2 2 2 0 0 0 0 1 0 1 1 0 2 0 1 2 0 0 0 2 0 0 16 1 1714.8971 H7C2W1;C9K0G7;E9PCG9;Q02338 H7C2W1 84 99 BDH1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes no 3 0.013394 45.33 By MS/MS By matching 1 1 30387000 14200000 16187000 7314 625 8177 18530;18531 16867 16867 68 1142;1143 1 VVNITSPGHDASSR RAEKGVARVVNITSPG PGHDASSRSPTTTASV R V V S R S 1 1 1 1 0 0 0 1 1 1 0 0 0 0 1 3 1 0 0 2 0 0 14 0 1438.7165 Q15723 Q15723 358 371 ELF2 ETS-related transcription factor Elf-2 yes yes 2 0.0030241 76.01 By MS/MS By MS/MS 1 1 5615600 2937700 2677900 7315 2005 8178 18532;18533 16868;16869 16868 3913 2 VVNTDHGSPEQLQIPVTDSGR PSGSQRARVVNTDHGS IPVTDSGRHILEDSCA R V V G R H 0 1 1 2 0 2 1 2 1 1 1 0 0 0 2 2 2 0 0 3 0 0 21 0 2248.1084 Q6IQ49 Q6IQ49 271 291 SDE2 Protein SDE2 homolog yes yes 3 2.4225E-08 91.067 By MS/MS By MS/MS 1 1 66073000 36122000 29951000 7316 2146 8179 18534;18535 16870;16871 16871 6900 2 VVPEDGSPEKR KEVQSSCRVVPEDGSP EDGSPEKRCPGGVLSC R V V K R C 0 1 0 1 0 0 2 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 11 1 1211.6146 Q02040 Q02040 531 541 AKAP17A A-kinase anchor protein 17A yes yes 2;3 0.00068697 110.31 By MS/MS By MS/MS 1 2 20363000 0 20363000 7317 1837 8180 18536;18537;18538 16872;16873;16874;16875 16874 3439 4 VVPGQFDDADSSDSENRDLK YRRLLMSRVVPGQFDD DSENRDLKTVKEKDDI R V V L K T 1 1 1 5 0 1 1 1 0 0 1 1 0 1 1 3 0 0 0 2 0 0 20 1 2192.9822 E9PFQ8;Q9BRS2 E9PFQ8 11 30 RIOK1 Serine/threonine-protein kinase RIO1 yes no 3 0.007452 50.189 By MS/MS By matching 1 1 65688000 43835000 21853000 7318 785 8181 18539;18540 16876 16876 1414 1 VVPQQITHTSPR TSNIPVAKVVPQQITH QITHTSPRIQPDYPAE K V V P R I 0 1 0 0 0 2 0 0 1 1 0 0 0 0 2 1 2 0 0 2 0 0 12 0 1361.7415 H7BXF5;Q9H0E3 H7BXF5 407 418 SAP130 Histone deacetylase complex subunit SAP130 yes no 2 0.0039034 103.97 By MS/MS By MS/MS 1 1 14293000 7791600 6501800 7319 1148 8182 18541;18542 16877;16878 16878 2093;6544 2 VVPSFLPVDQGGSLVGR EGAPPEDKVVPSFLPV QGGSLVGRNGVGGMAK K V V G R N 0 1 0 1 0 1 0 3 0 0 2 0 0 1 2 2 0 0 0 4 0 0 17 0 1725.9414 Q14126 Q14126 668 684 DSG2 Desmoglein-2 yes yes 2;3 6.2933E-11 125.61 By MS/MS By MS/MS 2 2 96851000 49032000 47819000 7320 1939 8183 18543;18544;18545;18546 16879;16880;16881;16882;16883 16882 3741 5 VVQEYIDAFSDYANFK EQYEFCYKVVQEYIDA FSDYANFK________ K V V F K - 2 0 1 2 0 1 1 0 0 1 0 1 0 2 0 1 0 0 2 2 0 0 16 0 1907.8941 P18433 P18433 787 802 PTPRA Receptor-type tyrosine-protein phosphatase alpha yes yes 2 3.1406E-15 132.56 By MS/MS By MS/MS 1 1 20332000 11485000 8846600 7321 1599 8184 18547;18548 16884;16885 16885 7569 2 VVQMLGSLGGQINK SLEEIRIRVVQMLGSL SLGGQINKNLLTVTSS R V V N K N 0 0 1 0 0 2 0 3 0 1 2 1 1 0 0 1 0 0 0 2 0 0 14 0 1442.7915 P78527 P78527 855 868 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.00049727 106.76 By MS/MS By MS/MS 1 1 5773500 3282000 2491500 7322 1816 8185 18549;18550 16886;16887 16886 3392 2 VVSEDFLQDVSASTK EVKEANIRVVSEDFLQ QDVSASTKSLQELFLA R V V T K S 1 0 0 2 0 1 1 0 0 0 1 1 0 1 0 3 1 0 0 3 0 0 15 0 1623.7992 P09874 P09874 453 467 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 6.0952E-23 148.18 By MS/MS By MS/MS 1 1 14265000 7524100 6740500 7323 1550 8186 18551;18552 16888;16889 16888 2 VVSSEGGRPSVDLSFQPSQPLSK GRGIPIERVVSSEGGR QPSQPLSKSSSSPELQ R V V S K S 0 1 0 1 0 2 1 2 0 0 2 1 0 1 3 6 0 0 0 3 0 0 23 1 2400.2285 P49815;H3BMQ0;H3BQK4 P49815 1362 1384 TSC2 Tuberin yes no 3 0.00053675 62.831 By MS/MS By matching 1 1 16374000 8879400 7494600 7324 1731 8187 18553;18554 16890 16890 3277 1 VVSSPKLAPK NVKPSVVKVVSSPKLA SSPKLAPKRKAVEMHA K V V P K R 1 0 0 0 0 0 0 0 0 0 1 2 0 0 2 2 0 0 0 2 0 0 10 1 1024.6281 O75152;A0A1B0GTU1;A0A1B0GUI2 O75152 660 669 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.022621 65.465 By matching By MS/MS 1 1 8771000 4734400 4036600 7325 1431 8188 18555;18556 16891 16891 1 VVSSTSEEEEAFTEK FTGIRPARVVSSTSEE EEEAFTEKFLKINCKY R V V E K F 1 0 0 0 0 0 5 0 0 0 0 1 0 1 0 3 2 0 0 2 0 0 15 0 1670.7523 Q8N573 Q8N573 199 213 OXR1 Oxidation resistance protein 1 yes yes 2 3.1484E-120 219.41 By MS/MS By MS/MS 3 3 90269000 46619000 43650000 7326 2315 8189;8190 18557;18558;18559;18560;18561;18562 16892;16893;16894;16895;16896 16895 4650;4651;4652 5 VVSSTSEEEEAFTEKFLK FTGIRPARVVSSTSEE AFTEKFLKINCKYITS R V V L K I 1 0 0 0 0 0 5 0 0 0 1 2 0 2 0 3 2 0 0 2 0 0 18 1 2058.9997 Q8N573 Q8N573 199 216 OXR1 Oxidation resistance protein 1 yes yes 3 0.0077018 52.862 By MS/MS By MS/MS 1 1 5202000 2844200 2357700 7327 2315 8191 18563;18564 16897;16898 16897 4650;4651;4652 2 VVSVLTVLHQDWLNGK EQYNSTYRVVSVLTVL HQDWLNGKEYKCKVSN R V V G K E 0 0 1 1 0 1 0 1 1 0 3 1 0 0 0 1 1 1 0 4 0 0 16 0 1806.9992 A0A0A0MS08;P01861;P01857;P01860 A0A0A0MS08 185 200 IGHG1;IGHG4;IGHG3 Ig gamma-4 chain C region;Ig gamma-1 chain C region;Ig gamma-3 chain C region yes no 3 0.0040023 65.956 By MS/MS 1 2547100 0 2547100 7328 206 8192 18565 16899 16899 1 VVVLMGSTSDLGHCEK LKSESQCRVVVLMGST SDLGHCEKIKKACGNF R V V E K I 0 0 0 1 1 0 1 2 1 0 2 1 1 0 0 2 1 0 0 3 0 0 16 0 1730.8331 E9PBS1;P22234;D6RF62 E9PBS1 268 283 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 3 0.012563 56.708 By MS/MS 1 0 0 0 7329 759 8193 18566 16900 16900 1 VVVSPTK AAATSAKKVVVSPTKK KVVVSPTKKVAVATPA K V V T K K 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 3 0 0 7 0 728.44324 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 70 NCL Nucleolin yes no 2 0.0044625 114.89 By MS/MS By MS/MS 1 1 123300000 71969000 51333000 7330 1604 8194 18567;18568 16901;16902;16903;16904;16905 16902 2963 5 VVVSPTKK AAATSAKKVVVSPTKK VVVSPTKKVAVATPAK K V V K K V 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 71 NCL Nucleolin yes no 2 0.013305 104.42 By MS/MS By MS/MS 1 1 1931300000 866830000 1064500000 7331 1604 8195 18569;18570 16906;16907;16908 16907 2963 3 VVVSPTKKVAVATPAK AAATSAKKVVVSPTKK VAVATPAKKAAVTPGK K V V A K K 3 0 0 0 0 0 0 0 0 0 0 3 0 0 2 1 2 0 0 5 0 0 16 2 1593.9818 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 79 NCL Nucleolin yes no 3 0.030589 49.188 By MS/MS 1 21114000 0 21114000 7332 1604 8196 18571 16909 16909 2963 0 VWPQQPSGELFEIEIDTLETTCHVLDPTPVAR LNQIDEVKVWPQQPSG LDPTPVARCSVRQLKE K V W A R C 1 1 0 2 1 2 4 1 1 2 3 0 0 1 4 1 4 1 0 3 0 0 32 0 3676.8083 P02765;C9JV77 P02765 68 99 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 3 7.2005E-07 72.848 By MS/MS By matching 1 1 51133000 24688000 26444000 7333 1519 8197 18572;18573 16910;16911 16910 2 VWSPLVTEEGKR TVARSEHKVWSPLVTE LVTEEGKRHPYKMNLA K V W K R H 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 1 1 1 0 2 0 0 12 1 1399.746 O00151 O00151 88 99 PDLIM1 PDZ and LIM domain protein 1 yes yes 2;3 0.0017981 72.815 By MS/MS By MS/MS 2 2 24620000 13936000 10684000 7334 1321 8198 18574;18575;18576;18577 16912;16913;16914;16915 16914 2381 3 VYAPASTLVDQPYANEGTVVVTER QSLIVTERVYAPASTL GTVVVTERVIQPHGGG R V Y E R V 3 1 1 1 0 1 2 1 0 0 1 0 0 0 2 1 3 0 2 5 0 0 24 0 2578.2915 Q14126 Q14126 967 990 DSG2 Desmoglein-2 yes yes 3 4.5259E-10 91.565 By MS/MS By MS/MS 3 3 99742000 61066000 38676000 7335 1939 8199;8200 18578;18579;18580;18581;18582;18583 16916;16917;16918;16919;16920 16917 7695;7696 5 VYDALNVLMAMNIISKEK DQKNIRRRVYDALNVL MNIISKEKKEIKWIGL R V Y E K K 2 0 2 1 0 0 1 0 0 2 2 2 2 0 0 1 0 0 1 2 0 0 18 1 2051.0795 C9J977;C9J461;Q5JSB5;C9J872;Q14186;Q14188 C9J977 98 115 TFDP2;TFDP1 Transcription factor Dp-1;Transcription factor Dp-2 yes no 2 0.00093155 78.903 By MS/MS By MS/MS 2 2 228450000 118880000 109560000 7336 560 8201 18584;18585;18586;18587 16921;16922;16923;16924 16924 60;61 7311 4 VYDDGTKVVYEVR GVHQKGVKVYDDGTKV TKVVYEVRSGGTVVEN K V Y V R S 0 1 0 2 0 0 1 1 0 0 0 1 0 0 0 0 1 0 2 4 0 0 13 1 1541.7726 C9JA33;B1ALY0;Q8IXS6 C9JA33 169 181 PALM2;PALM2-AKAP2 Paralemmin-2 yes no 2 0.016886 58.274 By MS/MS By matching 1 1 4744300 2741600 2002700 7337 464 8202 18588;18589 16925 16925 7283 1 VYEDSGIPLPAESPK IKATVKRKVYEDSGIP PLPAESPKKGPKKVAS K V Y P K K 1 0 0 1 0 0 2 1 0 1 1 1 0 0 3 2 0 0 1 1 0 0 15 0 1600.7985 F8W038;F8W1H0;H0YIS7;Q8IXM2 F8W038 84 98 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 2 0.0013175 80.609 By MS/MS By MS/MS 1 1 19478000 8898400 10579000 7338 928 8203 18590;18591 16926;16927 16927 1667 2 VYEDSGIPLPAESPKKGPK IKATVKRKVYEDSGIP ESPKKGPKKVASGVLS K V Y P K K 1 0 0 1 0 0 2 2 0 1 1 3 0 0 4 2 0 0 1 1 0 0 19 2 2011.0626 F8W038;F8W1H0;H0YIS7;Q8IXM2 F8W038 84 102 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 3 0.0012721 70.072 By MS/MS By MS/MS 1 1 6736900 3601900 3135100 7339 928 8204 18592;18593 16928;16929 16928 1667 2 VYEHTSRFSPK VDSEKSNKVYEHTSRF HTSRFSPKKTSSNCNG K V Y P K K 0 1 0 0 0 0 1 0 1 0 0 1 0 1 1 2 1 0 1 1 0 0 11 1 1349.6728 P46100;A0A096LNL9;A0A096LNW1;A0A096LNN3 P46100 308 318 ATRX Transcriptional regulator ATRX yes no 2;3 0.0014357 86.288 By MS/MS By MS/MS 2 2 39929000 17243000 22686000 7340 1708 8205 18594;18595;18596;18597 16930;16931;16932 16930 3166 2 VYENVGLMQQQK EMREDSARVYENVGLM VGLMQQQKSFR_____ R V Y Q K S 0 0 1 0 0 3 1 1 0 0 1 1 1 0 0 0 0 0 1 2 0 0 12 0 1435.7129 Q06124 Q06124 583 594 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 2;3 4.6015E-138 242.35 By MS/MS By MS/MS 4 4 264680000 147010000 117670000 7341 1856 8206;8207 18598;18599;18600;18601;18602;18603;18604;18605 16933;16934;16935;16936;16937;16938;16939;16940;16941 16941 239 7670 9 VYENVGLMQQQKSFR EMREDSARVYENVGLM MQQQKSFR________ R V Y F R - 0 1 1 0 0 3 1 1 0 0 1 1 1 1 0 1 0 0 1 2 0 0 15 1 1825.9145 Q06124 Q06124 583 597 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 2 0.0078729 54.812 By matching By MS/MS 1 1 4899700 2502600 2397000 7342 1856 8208 18606;18607 16942 16942 239 3496;7670 1 VYESIGQYGGETVK LEPITDERVYESIGQY QYGGETVKIVRIEKAR R V Y V K I 0 0 0 0 0 1 2 3 0 1 0 1 0 0 0 1 1 0 2 2 0 0 14 0 1528.7409 Q8N3R9 Q8N3R9 242 255 MPP5 MAGUK p55 subfamily member 5 yes yes 2 1.4511E-05 118.28 By MS/MS By MS/MS 1 1 23120000 11005000 12115000 7343 2306 8209 18608;18609 16943;16944 16944 7798 2 VYIDPFTYEDPNEAVR YLIGHGTKVYIDPFTY EDPNEAVREFAKEIDV K V Y V R E 1 1 1 2 0 0 2 0 0 1 0 0 0 1 2 0 1 0 2 2 0 0 16 0 1926.9 Q96L35;P54760;P54753 Q96L35 589 604 EPHB4;EPHB3 Receptor protein-tyrosine kinase;Ephrin type-B receptor 4;Ephrin type-B receptor 3 yes no 2;3 4.7818E-05 99.215 By MS/MS By MS/MS 1 2 8962200 3490900 5471400 7344 1768 8210 18610;18611;18612 16945;16946;16947 16946 6739;7646;7647 3 VYNLLTPDSK EEPKIDFRVYNLLTPD NLLTPDSKMGEPVSES R V Y S K M 0 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 1 0 1 1 0 0 10 0 1148.6077 H0YC29;E5RJ97;E5RFF3;Q9UHF7 H0YC29 550 559 TRPS1 Zinc finger transcription factor Trps1 yes no 2 0.0044924 106.42 By MS/MS By MS/MS 1 1 5175100 2746500 2428600 7345 691 8211 18613;18614 16948;16949 16949 6407 2 VYNVDGPSNNATGQSR AKHMAGLKVYNVDGPS NNATGQSRAMIAAAAR K V Y S R A 1 1 3 1 0 1 0 2 0 0 0 0 0 0 1 2 1 0 1 2 0 0 16 0 1677.7707 Q8TAA9 Q8TAA9 311 326 VANGL1 Vang-like protein 1 yes yes 2 1.3062E-05 110.8 By MS/MS By MS/MS 1 1 7377200 3368600 4008600 7346 2366 8212 18615;18616 16950;16951 16950 7809 2 VYQVTEQQISEKLK TVLVVKDRVYQVTEQQ QQISEKLKTIMKENTE R V Y L K T 0 0 0 0 0 3 2 0 0 1 1 2 0 0 0 1 1 0 1 2 0 0 14 1 1691.9094 Q5JRA6;A0A0A0MRH6 Q5JRA6 1208 1221 MIA3 Melanoma inhibitory activity protein 3 yes no 3 0.0016772 66.568 By matching By MS/MS 1 1 92428000 27015000 65413000 7347 2071 8213 18617;18618 16952 16952 4067 1 VYSLGEENSTNNSTGQSR AKKVSGFKVYSLGEEN NNSTGQSRAVIAAAAR K V Y S R A 0 1 3 0 0 1 2 2 0 0 1 0 0 0 0 4 2 0 1 1 0 0 18 0 1941.8664 Q9ULK5 Q9ULK5 307 324 VANGL2 Vang-like protein 2 yes yes 2 1.5091E-27 139.86 By MS/MS By MS/MS 1 1 8491100 4089300 4401800 7348 2849 8214 18619;18620 16953;16954 16953 7944 2 VYTHEVVTLWYR RAFGIPIRVYTHEVVT EVVTLWYRSPEVLLGS R V Y Y R S 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 2 1 2 3 0 0 12 0 1564.8038 E5RIU6;A0A087WZZ9;P06493 E5RIU6 159 170 CDK1 Cyclin-dependent kinase 1 yes no 3 0.0059466 72.209 By MS/MS By matching 1 1 1492300 976890 515400 7349 119 8215 18621;18622 16955 16955 6250 1 VYTYIQSR SSCYEHQKVYTYIQSR VYTYIQSRFYRSPEVI K V Y S R F 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 2 1 0 0 8 0 1028.5291 A0A0A0MTH5;Q9NR20;Q92630 A0A0A0MTH5 376 383 DYRK4;DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 4;Dual specificity tyrosine-phosphorylation-regulated kinase 2 yes no 2 0.0034131 105.14 By MS/MS By MS/MS 1 1 5488500 2771600 2716900 7350 246 8216 18623;18624 16956;16957 16956 7211 2 VYYSPPVAR APDKTGIRVYYSPPVA YYSPPVARRLGVPVVH R V Y A R R 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 2 2 0 0 9 0 1050.5498 H0YDM2;O94964 H0YDM2 866 874 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes no 2 0.030315 52.482 By MS/MS By matching 1 1 7349000 4132700 3216300 7351 1065 8217 18625;18626 16958 16958 7443 1 WAELLSPLDESR LSDAELGRWAELLSPL LSPLDESRASITSVTS R W A S R A 1 1 0 1 0 0 2 0 0 0 3 0 0 0 1 2 0 1 0 0 0 0 12 0 1414.7092 Q9H6K5 Q9H6K5 1305 1316 PRR36 Proline-rich protein 36 yes yes 2 0.00064789 106.58 By MS/MS By matching 1 1 5113800 2699500 2414400 7352 2667 8218 18627;18628 16959 16959 5442 1 WAHDKFSGEEGEIEDDESGTENR RKSSTSPKWAHDKFSG DESGTENREEKDNIQP K W A N R E 1 1 1 3 0 0 6 3 1 1 0 1 0 1 0 2 1 1 0 0 0 0 23 1 2636.0899 Q9Y2W1 Q9Y2W1 922 944 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 2.511E-05 75.773 By MS/MS By MS/MS 1 1 24100000 13769000 10330000 7353 2897 8219 18629;18630 16960;16961 16961 6039 2 WAHDKFSGEEGEIEDDESGTENREEK RKSSTSPKWAHDKFSG GTENREEKDNIQPTTE K W A E K D 1 1 1 3 0 0 8 3 1 1 0 2 0 1 0 2 1 1 0 0 0 0 26 2 3022.27 Q9Y2W1 Q9Y2W1 922 947 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 4 0.00013255 60.735 By MS/MS 1 11300000 0 11300000 7354 2897 8220 18631 16962 16962 6039 1 WCNVQSTQDEFEELTMSQK VVPEPVARWCNVQSTQ EELTMSQKNGGNVLQM R W C Q K N 0 0 1 1 1 3 3 0 0 0 1 1 1 1 0 2 2 1 0 1 0 0 19 0 2359.0097 D6RCP9;D6RFG8;P27707 D6RCP9 58 76 DCK Deoxycytidine kinase yes no 2;3 0.0029471 68.069 By MS/MS By MS/MS 2 2 16306000 9659000 6646900 7355 667 8221 18632;18633;18634;18635 16963;16964 16963 1193;6394 2 WCPTTNKPVKSPTPTVNPR MKANPGYKWCPTTNKP PTPTVNPRKKLWAFPS K W C P R K 0 1 2 0 1 0 0 0 0 0 0 2 0 0 5 1 4 1 0 2 0 0 19 2 2179.1208 C9JA69;Q8WY36;C9JYU6;C9JZA0;C9J8D0 C9JA69 149 167 BBX HMG box transcription factor BBX yes no 3 2.2807E-06 96.467 By MS/MS By MS/MS 1 1 48641000 28336000 20305000 7356 578 8222 18636;18637 16965;16966 16966 1056 2 WDEQTSNTKGDDDEESDEEAVKK RLMLHRIKWDEQTSNT SDEEAVKKTNKCVLVW K W D K K T 1 0 1 5 0 1 5 1 0 0 0 3 0 0 0 2 2 1 0 1 0 0 23 2 2654.1104 O43395 O43395 604 626 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 3 0.0067303 60.602 By matching By MS/MS 1 1 38385000 20071000 18315000 7357 1382 8223 18638;18639 16967 16967 2531;2532;6612;6613 1 WDGSEEDEDNSK KAQKSNKKWDGSEEDE EEDEDNSKKIKERSRI K W D S K K 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 2 0 1 0 0 0 0 12 0 1409.5219 A0A087WUT6;O60841 A0A087WUT6 161 172 EIF5B Eukaryotic translation initiation factor 5B yes no 2 7.6318E-09 135.04 By MS/MS By MS/MS 2 2 39558000 21330000 18228000 7358 49 8224 18640;18641;18642;18643 16968;16969;16970;16971 16969 83;84 4 WDKDDFESEEEDVK MIQVPQSKWDKDDFES ESEEEDVKSTQPISSV K W D V K S 0 0 0 4 0 0 4 0 0 0 0 2 0 1 0 1 0 1 0 1 0 0 14 1 1769.7268 Q7Z6E9 Q7Z6E9 1321 1334 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 2 0.0091199 65.652 By MS/MS By MS/MS 1 1 29458000 16174000 13285000 7359 2224 8225 18644;18645 16972;16973 16972 4454 2 WDQTADQTPGATPK PPSKRKRRWDQTADQT QTPGATPKKLSSWDQA R W D P K K 2 0 0 2 0 2 0 1 0 0 0 1 0 0 2 0 3 1 0 0 0 0 14 0 1514.7001 O75533 O75533 200 213 SF3B1 Splicing factor 3B subunit 1 yes yes 2 3.95E-57 191.63 By MS/MS By MS/MS 3 3 112570000 65231000 47337000 7360 1443 8226;8227 18646;18647;18648;18649;18650;18651 16974;16975;16976;16977;16978;16979 16976 6635;6636;6637 5 WDTGENPIYK EKEKMNAKWDTGENPI TGENPIYKSAVTTVVN K W D Y K S 0 0 1 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 0 0 0 10 0 1221.5666 P05556 P05556 775 784 ITGB1 Integrin beta-1 yes yes 2 1.4278E-05 141.48 By MS/MS By MS/MS 1 1 147550000 81262000 66289000 7361 1527 8228 18652;18653 16980;16981 16981 7548 2 WDTGENPIYKSAVTTVVNPK EKEKMNAKWDTGENPI VTTVVNPKYEGK____ K W D P K Y 1 0 2 1 0 0 1 1 0 1 0 2 0 0 2 1 3 1 1 3 0 0 20 1 2218.127 P05556 P05556 775 794 ITGB1 Integrin beta-1 yes yes 3 1.3989E-05 81.723 By MS/MS 1 13088000 13088000 0 7362 1527 8229 18654 16982;16983;16984 16983 2816;7548 3 WEQGQADYMGADSFDNIKR SSEERKERWEQGQADY DSFDNIKRKLDTYLQ_ R W E K R K 2 1 1 3 0 2 1 2 0 1 0 1 1 1 0 1 0 1 1 0 0 0 19 1 2229.9749 P46976 P46976 325 343 GYG1 Glycogenin-1 yes yes 3 9.2303E-07 92.633 By MS/MS By matching 1 1 7915200 3640200 4275100 7363 1715 8230 18655;18656 16985 16985 7624 1 WGAATTSPAASDAR EPCTKRPRWGAATTSP SPAASDARSFPSRQRR R W G A R S 5 1 0 1 0 0 0 1 0 0 0 0 0 0 1 2 2 1 0 0 0 0 14 0 1360.6371 Q86W56;A0A087WXI6;A0A087WX07 Q86W56 16 29 PARG Poly(ADP-ribose) glycohydrolase yes no 2 0.010365 79.885 By MS/MS 1 3176700 3176700 0 7364 2246 8231 18657 16986 16986 6941 1 WGQPPSPTPVPRPPDADPNTPSPK VQKILIWKWGQPPSPT DPNTPSPKPLEGRPER K W G P K P 1 1 1 2 0 1 0 1 0 0 0 1 0 0 10 2 2 1 0 1 0 0 24 1 2534.2554 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 503 526 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.017825 52.03 By MS/MS 1 2571800 0 2571800 7365 292 8232 18658 16987 16987 0 WIPLSSDAQAPLAQPESPTASAGDEPR LHSYMNVKWIPLSSDA ASAGDEPRSTPESGDS K W I P R S 5 1 0 2 0 2 2 1 0 1 2 0 0 0 5 4 1 1 0 0 0 0 27 0 2790.3461 Q6GQQ9 Q6GQQ9 433 459 OTUD7B OTU domain-containing protein 7B yes yes 3 0.0092475 45.972 By matching By MS/MS 1 1 8388000 4477400 3910600 7366 2141 8233 18659;18660 16988 16988 4257 1 WIYEDVER WIKFAQKRWIYEDVER WIYEDVERQWKGHDLN R W I E R Q 0 1 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 8 0 1108.5189 O43852 O43852 104 111 CALU Calumenin yes yes 2 0.016427 64.42 By MS/MS By matching 1 1 2470000 1421900 1048000 7367 1396 8234 18661;18662 16989 16989 7525 1 WKEPGSGGPQNLSGPGGR YGIERRRRWKEPGSGG NLSGPGGRERDYIAPW R W K G R E 0 1 1 0 0 1 1 6 0 0 1 1 0 0 3 2 0 1 0 0 0 0 18 1 1779.8652 M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7;Q9H0W8 M0QZH1 20 37 SMG9 Protein SMG9 yes no 2;3 0.0059558 62.589 By MS/MS By MS/MS 1 2 21696000 10350000 11346000 7368 1293 8235 18663;18664;18665 16990;16991;16992 16991 2329 3 WLDDLLASPPPSGGGAR PGPESSSRWLDDLLAS PPSGGGARRGAGAELK R W L A R R 2 1 0 2 0 0 0 3 0 0 3 0 0 0 3 2 0 1 0 0 0 0 17 0 1707.858 Q9C0C2 Q9C0C2 684 700 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 1.2191E-10 122.14 By MS/MS By MS/MS 1 1 47121000 24743000 22378000 7369 2615 8236 18666;18667 16993;16994;16995;16996 16996 5310 4 WLDESDAEMELR FLAPDFDRWLDESDAE SDAEMELRAKEEERLN R W L L R A 1 1 0 2 0 0 3 0 0 0 2 0 1 0 0 1 0 1 0 0 0 0 12 0 1492.6504 H3BPZ1;H3BS72;Q9P035 H3BPZ1 85 96 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 2 5.9077E-10 146.67 By MS/MS By MS/MS 3 3 899220000 473130000 426100000 7370 1127 8237;8238 18668;18669;18670;18671;18672;18673 16997;16998;16999;17000;17001;17002;17003;17004 17004 133 2060 8 WLDGASFDNER VLRLRERRWLDGASFD GASFDNERGSTSKEGE R W L E R G 1 1 1 2 0 0 1 1 0 0 1 0 0 1 0 1 0 1 0 0 0 0 11 0 1308.5735 E7EMW7;O95071 E7EMW7 316 326 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.019621 62.891 By matching By MS/MS 1 1 7376800 3939200 3437600 7371 707 8239 18674;18675 17005 17005 1257 1 WLEEADSSSGSPTSIDK KLKPLLNKWLEEADSS GSPTSIDKIAAQGRKR K W L D K I 1 0 0 2 0 0 2 1 0 1 1 1 0 0 1 5 1 1 0 0 0 0 17 0 1807.8112 P20265 P20265 331 347 POU3F2 POU domain, class 3, transcription factor 2 yes yes 2 3.8913E-07 111.73 By MS/MS By MS/MS 1 1 13970000 7489700 6480400 7372 1608 8240 18676;18677 17006;17007 17006 2969;2970 2 WLEEADSSSGSPTSIDKIAAQGR KLKPLLNKWLEEADSS DKIAAQGRKRKKRTSI K W L G R K 3 1 0 2 0 1 2 2 0 2 1 1 0 0 1 5 1 1 0 0 0 0 23 1 2404.1506 P20265 P20265 331 353 POU3F2 POU domain, class 3, transcription factor 2 yes yes 3 0.00041129 64.845 By MS/MS By matching 1 1 18362000 10160000 8202200 7373 1608 8241 18678;18679 17008 17008 2969;2970 1 WLKYIVYKER GFKWQDFKWLKYIVYK KYIVYKERVSASDGFW K W L E R V 0 1 0 0 0 0 1 0 0 1 1 2 0 0 0 0 0 1 2 1 0 0 10 2 1396.7867 H0YEP7;Q11203 H0YEP7 37 46 ST3GAL3 CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase yes no 2 0.023866 41.876 By MS/MS 1 0 0 0 7374 1069 8242 18680 17009 17009 7444;7445 1 WLNSGRGDEASEEGQNGSSPK KQQREKTRWLNSGRGD GQNGSSPKSKTKWTKE R W L P K S 1 1 2 1 0 1 3 4 0 0 1 1 0 0 1 4 0 1 0 0 0 0 21 1 2203.973 P35611;E7EV99;E7ENY0;H0Y9H2 P35611 447 467 ADD1 Alpha-adducin yes no 3 3.4419E-12 111.57 By MS/MS By MS/MS 2 2 154440000 90849000 63593000 7375 1673 8243;8244 18681;18682;18683;18684 17010;17011;17012;17013 17011 3083;3084 4 WLNSGRGDEASEEGQNGSSPKSK KQQREKTRWLNSGRGD NGSSPKSKTKWTKEDG R W L S K T 1 1 2 1 0 1 3 4 0 0 1 2 0 0 1 5 0 1 0 0 0 0 23 2 2419.1 P35611;E7EV99;E7ENY0;H0Y9H2 P35611 447 469 ADD1 Alpha-adducin yes no 3 0.00057545 69.03 By MS/MS By MS/MS 1 1 20315000 9056900 11258000 7376 1673 8245 18685;18686 17014;17015 17014 3083;3084 2 WLNSPNTYMK RQQREKTRWLNSPNTY NSPNTYMKVNVPEESR R W L M K V 0 0 2 0 0 0 0 0 0 0 1 1 1 0 1 1 1 1 1 0 0 0 10 0 1252.591 Q9UEY8 Q9UEY8 439 448 ADD3 Gamma-adducin yes yes 2 0.00097749 98.033 By MS/MS By MS/MS 3 2 11212000 6752800 4458800 7377 2808 8246;8247 18687;18688;18689;18690;18691 17016;17017;17018 17016 5756;7928 2 WLNTPNTYLR KQQKEKTRWLNTPNTY NTPNTYLRVNVADEVQ R W L L R V 0 1 2 0 0 0 0 0 0 0 2 0 0 0 1 0 2 1 1 0 0 0 10 0 1276.6564 P35612 P35612 433 442 ADD2 Beta-adducin yes yes 2 0.0012595 111.17 By MS/MS By MS/MS 1 1 3318700 1606900 1711800 7378 1674 8248 18692;18693 17019;17020 17019 6698 2 WLPSSPSGVAK EADHLSSKWLPSSPSG SSPSGVAKAKMFKLDT K W L A K A 1 0 0 0 0 0 0 1 0 0 1 1 0 0 2 3 0 1 0 1 0 0 11 0 1127.5975 Q8IWI9;H3BP52;H3BTF4 Q8IWI9 445 455 MGA MAX gene-associated protein yes no 2 0.0020842 92.112 By MS/MS By MS/MS 1 2 21893000 11907000 9986100 7379 2268 8249 18694;18695;18696 17021;17022 17021 4555;4556 2 WLREAEEESDHN KSVTAFFKWLREAEEE AEEESDHN________ K W L H N - 1 1 1 1 0 0 4 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 12 1 1513.6433 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1425 1436 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2;3 1.3277E-07 127.32 By MS/MS By MS/MS 2 2 587350000 334030000 253320000 7380 740 8250 18697;18698;18699;18700 17023;17024;17025 17023 1339 3 WLSTSIPEAQWHSSLAR EPKPRSARWLSTSIPE QWHSSLARTSSAEYNV R W L A R T 2 1 0 0 0 1 1 0 1 1 2 0 0 0 1 4 1 2 0 0 0 0 17 0 1967.9854 A0A0U1RQF0;P49327 A0A0U1RQF0 712 728 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 3 0.0085976 52.72 By MS/MS By MS/MS 1 1 10456000 6520900 3934800 7381 337 8251 18701;18702 17026;17027 17027 631;632 2 WLTSPVR RPGNTLRKWLTSPVRR KWLTSPVRRLSSGKAD K W L V R R 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 1 0 1 0 0 7 0 857.47594 E7EWP2;E7EPJ7;O75962;C9J1B4;H7BXZ5;J3QSW6;O60229 E7EWP2 1717 1723 TRIO;KALRN Triple functional domain protein;Kalirin yes no 2 0.011331 98.582 By MS/MS By MS/MS 1 1 2137300 1210000 927250 7382 713 8252 18703;18704 17028;17029 17028 1263 2 WLVYPGSVSLMTR ALAHSLGRWLVYPGSV GSVSLMTRALLPLLQQ R W L T R A 0 1 0 0 0 0 0 1 0 0 2 0 1 0 1 2 1 1 1 2 0 0 13 0 1507.7857 Q9H3Z7 Q9H3Z7 109 121 ABHD16B Abhydrolase domain-containing protein 16B yes yes 2 0.01339 47.606 By MS/MS 1 3894300 0 3894300 7383 2657 8253 18705 17030 17030 353 5419;5420 1 WNTIPLR VRFFVDKKWNTIPLRN KWNTIPLRNKSLQRIC K W N L R N 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 1 1 0 0 0 0 7 0 898.50249 H0YN99;Q9H792;H3BUZ5 H0YN99 291 297 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.031103 104.2 By matching By MS/MS 1 1 7980400 4696100 3284400 7384 1102 8254 18706;18707 17031 17031 1 WPFSGKTSPPCSPANLSR RSPSPSFRWPFSGKTS CSPANLSRHKAAAYDI R W P S R H 1 1 1 0 1 0 0 1 0 0 1 1 0 1 4 4 1 1 0 0 0 0 18 1 1987.9574 P49585;C9JEJ2 P49585 336 353 PCYT1A Choline-phosphate cytidylyltransferase A yes no 3 0.00090216 72.864 By MS/MS By MS/MS 2 1 19301000 11879000 7421600 7385 1725 8255;8256 18708;18709;18710 17032;17033;17034;17035 17032 3235;3236 3 WPTVDASYYGGR DDGLPKKKWPTVDASY DASYYGGRGVGGIKRM K W P G R G 1 1 0 1 0 0 0 2 0 0 0 0 0 0 1 1 1 1 2 1 0 0 12 0 1370.6255 Q9H6X2;J3KPY9;P58335 Q9H6X2 375 386 ANTXR1;ANTXR2 Anthrax toxin receptor 1;Anthrax toxin receptor 2 yes no 2 0.0010453 92.538 By matching By MS/MS 1 1 10812000 5251700 5560000 7386 2671 8257 18711;18712 17036 17036 7892 1 WQLSSPDGVDTDDDLPK RTLTFAERWQLSSPDG DTDDDLPKSRASKRTC R W Q P K S 0 0 0 5 0 1 0 1 0 0 2 1 0 0 2 2 1 1 0 1 0 0 17 0 1886.8534 Q8NG08 Q8NG08 1017 1033 HELB DNA helicase B yes yes 2 2.4214E-07 115.04 By MS/MS By MS/MS 1 1 10854000 5087000 5766500 7387 2357 8258 18713;18714 17037;17038 17037 4731 2 WQPDTEEEYEDSSGNVVNKK KLQKASERWQPDTEEE SGNVVNKKTYEDLKRQ R W Q K K T 0 0 2 2 0 1 4 1 0 0 0 2 0 0 1 2 1 1 1 2 0 0 20 1 2353.0346 Q12874 Q12874 471 490 SF3A3 Splicing factor 3A subunit 3 yes yes 3 0.0027252 53.554 By MS/MS By MS/MS 1 1 28405000 15158000 13247000 7388 1881 8259 18715;18716 17039;17040 17040 7676 2 WQPLYLMITVVLNCKMLR EELDTQRRWQPLYLMI VLNCKMLRMIILMPV_ R W Q L R M 0 1 1 0 1 1 0 0 0 1 4 1 2 0 1 0 1 1 1 2 0 0 18 1 2277.22 K7ERU1 K7ERU1 18 35 PTPN2 yes yes 3 0.028476 40.724 By MS/MS 1 3046100 3046100 0 7389 1289 8260 18717 17041 17041 7488 0 WQSPVTK PRMQMGKRWQSPVTKS RWQSPVTKSGRRRRSP R W Q T K S 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 1 1 1 0 1 0 0 7 0 844.4443 A9Z1X7;M0R088 A9Z1X7 545 551 SRRM1 no no 2 0.0086774 101.43 By MS/MS By matching 1 1 114100000 63729000 50373000 7390 442;1311 8261 18718;18719 17042 17042 868 1 WRPHSPDGPR GSRRDGERWRPHSPDG PHSPDGPRSAGWREHM R W R P R S 0 2 0 1 0 0 0 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 10 1 1203.5897 I1E4Y6;Q6Y7W6;C9JH78;C9IYH5 I1E4Y6 254 263 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2;3 0.0031812 78.705 By MS/MS By MS/MS 2 1 32940000 25191000 7748700 7391 1194 8262 18720;18721;18722 17043;17044 17043 2174 2 WRSLQQLAEER SIKELNERWRSLQQLA LQQLAEERSQLLGSAH R W R E R S 1 2 0 0 0 2 2 0 0 0 2 0 0 0 0 1 0 1 0 0 0 0 11 1 1414.7317 A0A0D9SF54;A0A0D9SGF6;Q13813 A0A0D9SF54 1195 1205 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 3 0.0015001 85.45 By MS/MS By MS/MS 1 1 9222900 4569200 4653700 7392 312 8263 18723;18724 17045;17046 17045 566 2 WSIVSSPER ENDVLHKRWSIVSSPE SIVSSPEREITLVNLK R W S E R E 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 3 0 1 0 1 0 0 9 0 1059.5349 Q12923 Q12923 1081 1089 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.00814 77.062 By matching By MS/MS 1 1 6772600 2810600 3962000 7393 1885 8264 18725;18726 17047 17047 3596 1 WSNIYEDNGDDAPQNAK PELDMAIKWSNIYEDN DDAPQNAKKARLLPEG K W S A K K 2 0 3 3 0 1 1 1 0 1 0 1 0 0 1 1 0 1 1 0 0 0 17 0 1935.8235 Q8N6N3 Q8N6N3 128 144 C1orf52 UPF0690 protein C1orf52 yes yes 2 0.0019814 66.498 By MS/MS 1 2086800 2086800 0 7394 2322 8265 18727 17048 17048 7801 1 WSPPQNYK GSSANASKWSPPQNYK WSPPQNYKKRVAALEA K W S Y K K 0 0 1 0 0 1 0 0 0 0 0 1 0 0 2 1 0 1 1 0 0 0 8 0 1018.4872 H3BRM1;H3BRF9;Q96K21 H3BRM1 114 121 ZFYVE19 Abscission/NoCut checkpoint regulator yes no 2 0.013683 81.525 By MS/MS By matching 1 1 15781000 9170000 6611000 7395 1136 8266 18728;18729 17049 17049 2072 1 WSSLACNIALDAVK ITTKAISRWSSLACNI NIALDAVKMVQFEENG R W S V K M 3 0 1 1 1 0 0 0 0 1 2 1 0 0 0 2 0 1 0 1 0 0 14 0 1546.7814 B4DUR8;P49368;Q5SZX6;E9PQ35;Q5SZW8;E9PRC8 B4DUR8 123 136 CCT3 T-complex protein 1 subunit gamma yes no 2 0.012794 65.395 By MS/MS 1 1059800 1059800 0 7396 493 8267 18730 17050 17050 1 WSTELVPEGLQSPR ISPSEDRRWSTELVPE PEGLQSPRGTPDSESS R W S P R G 0 1 0 0 0 1 2 1 0 0 2 0 0 0 2 2 1 1 0 1 0 0 14 0 1597.81 H3BV44;B2RTY4;H3BMM1;H3BRD5 H3BV44 85 98 MYO9A Unconventional myosin-IXa yes no 2 0.0070492 65.565 By MS/MS By matching 1 1 4107300 2187600 1919700 7397 472 8268 18731;18732 17051 17051 899 1 WTDGSLSPPAKEPLASDSR SFHTEAARWTDGSLSP EPLASDSRNSHELGPC R W T S R N 2 1 0 2 0 0 1 1 0 0 2 1 0 0 3 4 1 1 0 0 0 0 19 1 2012.9803 O15085 O15085 1474 1492 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 3 0.010261 50.387 By matching By MS/MS 1 1 4427200 1819400 2607800 7398 1357 8269 18733;18734 17052 17052 6602 1 WTHNSKYYQK FGLCTGFRWTHNSKYY HNSKYYQKGSHVRQDS R W T Q K G 0 0 1 0 0 1 0 0 1 0 0 2 0 0 0 1 1 1 2 0 0 0 10 1 1353.6466 Q9NRM7 Q9NRM7 818 827 LATS2 Serine/threonine-protein kinase LATS2 yes yes 3 0.020174 51.762 By MS/MS By matching 1 1 7140700 4186500 2954200 7399 2722 8270 18735;18736 17053 17053 5563 1 WTKPSSFSDSER GEDMLVWRWTKPSSFS SSFSDSER________ R W T E R - 0 1 0 1 0 0 1 0 0 0 0 1 0 1 1 4 1 1 0 0 0 0 12 1 1425.6525 H0Y9B7;Q8NC56 H0Y9B7 74 85 LEMD2 LEM domain-containing protein 2 yes no 2;3 2.0684E-05 118.52 By MS/MS By MS/MS 2 2 149780000 73057000 76725000 7400 1045 8271 18737;18738;18739;18740 17054;17055;17056;17057 17057 1941;1942 4 WTPKSPLDPDSGLLSCTLPNGFGGQSGPEGER PMEEDGLRWTPKSPLD QSGPEGERSLAPPDAS R W T E R S 0 1 1 2 1 1 2 6 0 0 4 1 0 1 5 4 2 1 0 0 0 0 32 1 3355.5779 A0A087X0R7;Q9H4L4 A0A087X0R7 158 189 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 0.010347 42.856 By MS/MS 1 23961000 0 23961000 7401 132 8272 18741 17058 17058 237 1 WVEENVPSSVTDVALPALLDSDEER KAQEDDLKWVEENVPS LLDSDEERMITHFERS K W V E R M 2 1 1 3 0 0 4 0 0 0 3 0 0 0 2 3 1 1 0 4 0 0 25 0 2769.3345 Q8NBN3 Q8NBN3 520 544 TMEM87A Transmembrane protein 87A yes yes 3 4.4051E-08 85.044 By MS/MS By matching 1 1 19506000 16193000 3313200 7402 2333 8273 18742;18743 17059 17059 4671 1 WYLFGMGNEIDVHAAFFHGQVLTSK MCAKDRVKWYLFGMGN HGQVLTSKNYRVDTIN K W Y S K N 2 0 1 1 0 1 1 3 2 1 2 1 1 3 0 1 1 1 1 2 0 0 25 0 2866.3901 CON__ENSEMBL:ENSBTAP00000031900 CON__ENSEMBL:ENSBTAP00000031900 283 307 yes yes 3 0.015344 43.216 By MS/MS By matching 1 1 9998300 8623400 1374900 + 7403 630 8274 18744;18745 17060 17060 1150 1 YAALSDQGLDIK KVRPSASRYAALSDQG SDQGLDIKAAFQPEAN R Y A I K A 2 0 0 2 0 1 0 1 0 1 2 1 0 0 0 1 0 0 1 0 0 0 12 0 1292.6612 Q8WX93 Q8WX93 1348 1359 PALLD Palladin yes yes 2 4.5519E-07 123.63 By MS/MS By MS/MS 2 1 13705000 8258000 5447300 7404 2411 8275 18746;18747;18748 17061;17062;17063 17063 4839;7819 3 YAALSVDGEDENEGEDYAE SKFSSASKYAALSVDG NEGEDYAE________ K Y A A E - 3 0 1 3 0 0 5 2 0 0 1 0 0 0 0 1 0 0 2 1 0 0 19 0 2074.8127 E7EX17;P23588 E7EX17 598 616 EIF4B Eukaryotic translation initiation factor 4B yes no 2 0.001133 69.229 By MS/MS By MS/MS 2 2 45803000 22498000 23305000 7405 750 8276 18749;18750;18751;18752 17064;17065 17064 1368;7374 2 YADLPGIAR ________________ ADLPGIARNEPDVYET K Y A A R N 2 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 9 0 974.51853 F8VRV7;F8VW18;F8W1I6;Q13561;F8W0U6 F8VRV7 6 14 DCTN2 Dynactin subunit 2 yes no 2 0.0053552 75.213 By MS/MS By MS/MS 1 1 47016000 29430000 17586000 7406 914 8277 18753;18754 17066;17067 17066 7411 2 YAKESLKEEDESDDDNM DIREEAEKYAKESLKE DESDDDNM________ K Y A N M - 1 0 1 4 0 0 4 0 0 0 1 2 1 0 0 2 0 0 1 0 0 0 17 2 2016.8106 H0YJ03;G3V4X5;P25788 H0YJ03 67 83 PSMA3 Proteasome subunit alpha type-3 yes no 2;3 0.0024178 79.393 By matching By MS/MS 3 4 135480000 18877000 116610000 7407 977 8278;8279 18755;18756;18757;18758;18759;18760;18761 17068;17069;17070;17071 17069 112 1779 4 YALYDATYETK MLPDKDCRYALYDATY YDATYETKESKKEDLV R Y A T K E 2 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 2 0 3 0 0 0 11 0 1336.6187 P23528;G3V1A4;E9PP50;E9PK25;E9PQB7;Q9Y281;E9PLJ3 P23528 82 92 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2 0.0010387 107.21 By MS/MS By MS/MS 1 1 11608000 5916700 5691700 7408 1625 8280 18762;18763 17072;17073 17072 2 YAPLHLVPLIER KMKRLESKYAPLHLVP HLVPLIERLGTPQQIA K Y A E R L 1 1 0 0 0 0 1 0 1 1 3 0 0 0 2 0 0 0 1 1 0 0 12 0 1419.8238 H0YL50;E7EW33;H7C229;E7EVJ5;Q7L576;Q96F07 H0YL50 28 39 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 2 0.0019616 82.029 By MS/MS By matching 1 1 2798700 1802000 996640 7409 743 8281 18764;18765 17074 17074 7371 1 YATLPNIMK DLRLNEPRYATLPNIM ATLPNIMKAKKKKIEV R Y A M K A 1 0 1 0 0 0 0 0 0 1 1 1 1 0 1 0 1 0 1 0 0 0 9 0 1049.558 M0QY67;P38117 M0QY67 139 147 ETFB Electron transfer flavoprotein subunit beta yes no 2 0.0021649 107.9 By MS/MS By MS/MS 1 1 5928500 3298500 2630100 7410 1300 8282 18766;18767 17075;17076 17075 7489 2 YATLSLFNTYK TKAKDGKKYATLSLFN LSLFNTYKGKSLETQK K Y A Y K G 1 0 1 0 0 0 0 0 0 0 2 1 0 1 0 1 2 0 2 0 0 0 11 0 1319.6762 E7EPN9;Q9Y520 E7EPN9 17 27 PRRC2C Protein PRRC2C yes no 2 0.00051702 103.7 By MS/MS By MS/MS 1 1 2846200 1927500 918710 7411 715 8283 18768;18769 17077;17078 17078 7358 2 YATLSLFNTYKGK TKAKDGKKYATLSLFN LFNTYKGKSLETQKTT K Y A G K S 1 0 1 0 0 0 0 1 0 0 2 2 0 1 0 1 2 0 2 0 0 0 13 1 1504.7926 E7EPN9;Q9Y520 E7EPN9 17 29 PRRC2C Protein PRRC2C yes no 2 0.0054716 68.069 By MS/MS By matching 1 1 2631800 1907500 724310 7412 715 8284 18770;18771 17079 17079 7358 1 YATPQVIQAPGPR QSFASDPKYATPQVIQ VIQAPGPRAGPCILPI K Y A P R A 2 1 0 0 0 2 0 1 0 1 0 0 0 0 3 0 1 0 1 1 0 0 13 0 1396.7463 H0Y5H7;C9J1X3;Q07912 H0Y5H7 394 406 TNK2 Activated CDC42 kinase 1 yes no 2 4.2453E-08 128.03 By MS/MS By MS/MS 1 1 11887000 6167600 5719500 7413 555 8285 18772;18773 17080;17081 17081 7310 2 YAVLYQPLFDK EVHDLERKYAVLYQPL LYQPLFDKRFEIINAI K Y A D K R 1 0 0 1 0 1 0 0 0 0 2 1 0 1 1 0 0 0 2 1 0 0 11 0 1355.7125 F8VRJ2;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;F8VV59;B7Z9C2;F8W0J6;F5H4R6;H0YIV4;P55209;F8VVB5;H0YH88;F8W543 F8VRJ2 65 75 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 2 0.011497 74.162 By MS/MS By matching 1 1 2009200 928480 1080700 7414 519 8286 18774;18775 17082 17082 1 YDDDLTDAVFKTLSR ________________ AVFKTLSRLAHRLKNA - Y D S R L 1 1 0 4 0 0 0 0 0 0 2 1 0 1 0 1 2 0 1 1 0 0 15 1 1757.8472 I3L3I8 I3L3I8 1 15 METTL22 yes yes 2 0.02019 49.223 By MS/MS 1 0 0 0 7415 1213 8287 18776 17083 17083 2197;7473 1 YDERPGPSPLPHR SGRDDTSRYDERPGPS GPSPLPHRDRDRDRER R Y D H R D 0 2 0 1 0 0 1 1 1 0 1 0 0 0 4 1 0 0 1 0 0 0 13 1 1519.7532 P08621 P08621 219 231 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 3 0.0021231 74.726 By MS/MS By MS/MS 1 1 46594000 18077000 28518000 7416 1545 8288 18777;18778 17084;17085 17084 2841 2 YDGIILPGK AMRWFQQKYDGIILPG DGIILPGK________ K Y D G K - 0 0 0 1 0 0 0 2 0 2 1 1 0 0 1 0 0 0 1 0 0 0 9 0 974.54368 P62913 P62913 170 178 RPL11 60S ribosomal protein L11 yes yes 2 0.006658 97.798 By MS/MS By MS/MS 1 1 2923800 1438300 1485400 7417 1805 8289 18779;18780 17086;17087 17087 2 YDGSNRQTLVNTTHR RTVEKGNKYDGSNRQT TLVNTTHRPFDIHVYH K Y D H R P 0 2 2 1 0 1 0 1 1 0 1 0 0 0 0 1 3 0 1 1 0 0 15 1 1760.8554 P98164 P98164 3436 3450 LRP2 Low-density lipoprotein receptor-related protein 2 yes yes 4 0.025857 41.86 By MS/MS 1 346010 0 346010 7418 1820 8290 18781 17088 17088 7660 0 YDLLYQDI IDPKNIPKYDLLYQDI YDLLYQDI________ K Y D D I - 0 0 0 2 0 1 0 0 0 1 2 0 0 0 0 0 0 0 2 0 0 0 8 0 1041.5019 Q9NX01 Q9NX01 142 149 TXNL4B Thioredoxin-like protein 4B yes yes 2 0.014541 66.993 By MS/MS By matching 1 1 3056400 1707600 1348800 7419 2749 8291 18782;18783 17089 17089 7913 1 YDPSIGIYGLDFYVVLGR EHIDLGIKYDPSIGIY DFYVVLGRPGFSIADK K Y D G R P 0 1 0 2 0 0 0 3 0 2 2 0 0 1 1 1 0 0 3 2 0 0 18 0 2046.0462 P62913;Q5VVC8 P62913 119 136 RPL11 60S ribosomal protein L11 yes no 2 1.9639E-05 85.536 By MS/MS 1 10334000 10334000 0 7420 1805 8292 18784 17090 17090 1 YEAPQATDGLAGALDAR ADQRKEVKYEAPQATD LAGALDARQQSTGAIP K Y E A R Q 5 1 0 2 0 1 1 2 0 0 2 0 0 0 1 0 1 0 1 0 0 0 17 0 1717.8271 O60784 O60784 386 402 TOM1 Target of Myb protein 1 yes yes 2 1.6154E-16 134.68 By MS/MS By MS/MS 1 1 11135000 5594200 5540700 7421 1421 8293 18785;18786 17091;17092 17092 7531 2 YEDKPEPEVDALGSPPALLK ELSPAASKYEDKPEPE GSPPALLKSNISWILP K Y E L K S 2 0 0 2 0 0 3 1 0 0 3 2 0 0 4 1 0 0 1 1 0 0 20 1 2167.1049 Q68DQ2 Q68DQ2 918 937 CRYBG3 Very large A-kinase anchor protein yes yes 3 0.029391 40.432 By matching By MS/MS 1 1 2701800 1146400 1555500 7422 2135 8294 18787;18788 17093 17093 1 YEDSDKPFVDSPASR RFPLKRPRYEDSDKPF FVDSPASRFAGLDTNQ R Y E S R F 1 1 0 3 0 0 1 0 0 0 0 1 0 1 2 3 0 0 1 1 0 0 15 1 1711.7689 E9PKN0;E9PQ01;O94913 E9PKN0 718 732 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 2 0.00068508 86.497 By MS/MS By MS/MS 1 1 5846900 2691500 3155400 7423 816 8295 18789;18790 17094;17095 17094 1461 2 YENHSATAESSR DQHNFSPRYENHSATA SATAESSRLLDVPRYL R Y E S R L 2 1 1 0 0 0 2 0 1 0 0 0 0 0 0 3 1 0 1 0 0 0 12 0 1350.58 Q15262 Q15262 831 842 PTPRK Receptor-type tyrosine-protein phosphatase kappa yes yes 2 0.0051125 68.536 By MS/MS By matching 1 1 7025100 3259300 3765800 7424 1981 8296 18791;18792 17096 17096 7710 1 YEPQSPGYEPR EFESQSPRYEPQSPGY QSPGYEPRSPGYEPRS R Y E P R S 0 1 0 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 2 0 0 0 11 0 1321.5939 H3BS42;Q9H5H4 H3BS42 90 100 ZNF768 Zinc finger protein 768 yes no 2 0.0001151 115.34 By MS/MS By MS/MS 1 1 33649000 16860000 16789000 7425 1139 8297 18793;18794 17097;17098 17097 2077;7465 2 YEPQSPGYEPRSPGYEPR EFESQSPRYEPQSPGY RSPGYEPRSPGYESES R Y E P R S 0 2 0 0 0 1 3 2 0 0 0 0 0 0 5 2 0 0 3 0 0 0 18 1 2107.9599 H3BS42;Q9H5H4 H3BS42 90 107 ZNF768 Zinc finger protein 768 yes no 3 0.0043743 60.246 By MS/MS By matching 1 1 9847300 4929200 4918100 7426 1139 8298 18795;18796 17099 17099 2077;7465 1 YESLTDPSKLDSGK SDALDKIRYESLTDPS PSKLDSGKELKIDIIP R Y E G K E 0 0 0 2 0 0 1 1 0 0 2 2 0 0 1 3 1 0 1 0 0 0 14 1 1538.7464 P07900;G3V2J8;P08238;Q58FF8;Q58FF7 P08238 56 69 HSP90AA1;HSP90AB1;HSP90AB2P;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Putative heat shock protein HSP 90-beta-3 no no 3 0.012839 89.663 By MS/MS By matching 1 1 4416600 2398100 2018500 7427 1542;1540 8299 18797;18798 17100 17100 1 YESQEPLAGQESPLPLATR PLQQAEERYESQEPLA SPLPLATREAALPILE R Y E T R E 2 1 0 0 0 2 3 1 0 0 3 0 0 0 3 2 1 0 1 0 0 0 19 0 2085.0378 Q9C0C2 Q9C0C2 590 608 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2;3 4.019E-06 89.624 By MS/MS By MS/MS 2 2 25465000 14291000 11174000 7428 2615 8300 18799;18800;18801;18802 17101;17102;17103 17103 5311 3 YESSSYTDQFSR DLEQPTYRYESSSYTD SYTDQFSRNYEHRLRY R Y E S R N 0 1 0 1 0 1 1 0 0 0 0 0 0 1 0 4 1 0 2 0 0 0 12 0 1468.6107 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 969 980 TJP1 Tight junction protein ZO-1 yes no 2 0.0025488 107.39 By MS/MS By MS/MS 1 1 6822100 3814300 3007800 7429 129 8301 18803;18804 17104;17105 17104 229;230;6254 1 YEYDPDISPPR LSFPKNSKYEYDPDIS DPDISPPRKKQAKSHF K Y E P R K 0 1 0 2 0 0 1 0 0 1 0 0 0 0 3 1 0 0 2 0 0 0 11 0 1350.6092 Q9BRD0;H7C462 Q9BRD0 318 328 BUD13 BUD13 homolog yes no 2 0.0015293 96.734 By MS/MS By MS/MS 2 1 8175600 5091100 3084500 7430 2571 8302 18805;18806;18807 17106;17107;17108;17109 17108 5197 4 YFDNKDDDSDTETSNDLPK SMRQPDLKYFDNKDDD ETSNDLPKFADGIKAR K Y F P K F 0 0 2 6 0 0 1 0 0 0 1 2 0 1 1 2 2 0 1 0 0 0 19 1 2217.9186 C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6 C9J3R1 52 70 ZNF639 Zinc finger protein 639 yes no 3 0.014341 48.623 By MS/MS By matching 1 1 15584000 6942500 8641700 7431 544 8303 18808;18809 17110 17110 1 YFDSGDYNMAK KRLQKGQKYFDSGDYN SGDYNMAKAKMKNKQL K Y F A K A 1 0 1 2 0 0 0 1 0 0 0 1 1 1 0 1 0 0 2 0 0 0 11 0 1309.5285 O43768;A6NMQ3;Q5T5H1;H3BQ52;H3BTD3;H3BMD8;P56211 O43768 64 74 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 yes no 2 8.3032E-06 139.19 By MS/MS By MS/MS 3 3 257290000 143700000 113590000 7432 1394 8304;8305 18810;18811;18812;18813;18814;18815 17111;17112;17113;17114;17115 17113 168 2561;7524 5 YFDSGDYNMAKAK KRLQKGQKYFDSGDYN DYNMAKAKMKNKQLPS K Y F A K M 2 0 1 2 0 0 0 1 0 0 0 2 1 1 0 1 0 0 2 0 0 0 13 1 1508.6606 O43768;A6NMQ3;Q5T5H1;H3BQ52;H3BTD3;H3BMD8;P56211 O43768 64 76 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 yes no 3 0.0009052 89.189 By MS/MS 1 801410 0 801410 7433 1394 8306 18816 17116 17116 2561;7524 1 YFEADPPGQVAASPDPTT EVEALLDRYFEADPPG AASPDPTT________ R Y F T T - 3 0 0 2 0 1 1 1 0 0 0 0 0 1 4 1 2 0 1 1 0 0 18 0 1861.837 H0Y8X4;O43598 H0Y8X4 226 243 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 yes no 2 1.108E-05 91.789 By MS/MS By MS/MS 1 1 23175000 11959000 11216000 7434 1043 8307 18817;18818 17117;17118 17117 1938 2 YFEGEFTGLPPALTPPAPHSLLTAR LCGPADLRYFEGEFTG PHSLLTARQQAAFRDF R Y F A R Q 3 1 0 0 0 0 2 2 1 0 4 0 0 2 5 1 3 0 1 0 0 0 25 0 2681.3853 Q6P5Z2 Q6P5Z2 847 871 PKN3 Serine/threonine-protein kinase N3 yes yes 3 0.0052477 51.469 By MS/MS 1 7780800 7780800 0 7435 2157 8308 18819 17119 17119 6905 1 YFHRRCTYPEICNSDGHSNITVK EDKEFTCRYFHRRCTY GHSNITVKSNNV____ R Y F V K S 0 2 2 1 2 0 1 1 2 2 0 1 0 1 1 2 2 0 2 1 0 0 23 2 2853.3075 F8WCD6 F8WCD6 63 85 PLGLB1 yes yes 3 0.024709 43.164 By matching By MS/MS 1 1 16218000 9301900 6916600 7436 949 8309 18820;18821 17120 17120 7417 0 YFPFDQQNCTLK SACKIEVKYFPFDQQN DQQNCTLKFRSWTYDH K Y F L K F 0 0 1 1 1 2 0 0 0 0 1 1 0 2 1 0 1 0 1 0 0 0 12 0 1559.7079 P30926 P30926 159 170 CHRNB4 Neuronal acetylcholine receptor subunit beta-4 yes yes 3 0.0089104 62.799 By matching By MS/MS 1 1 6695500 3355300 3340200 7437 1655 8310 18822;18823 17121 17121 1 YFQISQDEDESESED DKETYELRYFQISQDE EDESESED________ R Y F E D - 0 0 0 3 0 2 4 0 0 1 0 0 0 1 0 3 0 0 1 0 0 0 15 0 1819.6908 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 107 121 RPL22L1 60S ribosomal protein L22-like 1 yes no 2 6.0006E-101 209.56 By MS/MS By MS/MS 10 11 640220000 304070000 336150000 7438 619 8311 18824;18825;18826;18827;18828;18829;18830;18831;18832;18833;18834;18835;18836;18837;18838;18839;18840;18841;18842;18843;18844 17122;17123;17124;17125;17126;17127;17128;17129;17130;17131;17132;17133;17134;17135;17136;17137;17138;17139;17140;17141;17142;17143;17144;17145;17146;17147;17148;17149;17150;17151;17152 17122 1125;1126 31 YFSLKPEEKDEK ELIAAEKKYFSLKPEE KPEEKDEKSTLEQKPS K Y F E K S 0 0 0 1 0 0 3 0 0 0 1 3 0 1 1 1 0 0 1 0 0 0 12 2 1511.7508 Q9Y5K6 Q9Y5K6 361 372 CD2AP CD2-associated protein yes yes 2 0.0019221 81.017 By MS/MS By matching 1 1 5274600 2249500 3025000 7439 2931 8312 18845;18846 17153;17154 17154 7959 2 YGAFVKPAVVTVGDFPEEDYGLDEI RYFECQAKYGAFVKPA EDYGLDEI________ K Y G E I - 2 0 0 3 0 0 3 3 0 1 1 1 0 2 2 0 1 0 2 4 0 0 25 1 2729.3112 Q99426 Q99426 220 244 TBCB Tubulin-folding cofactor B yes yes 2;3 0.005664 50.155 By MS/MS By matching 2 1 36762000 34732000 2030000 7440 2547 8313 18847;18848;18849 17155;17156 17156 7861 2 YGAVEETAWKTERLGR EAEKPLRRYGAVEETA WKTERLGRS_______ R Y G G R S 2 2 0 0 0 0 3 2 0 0 1 1 0 0 0 0 2 1 1 1 0 0 16 2 1864.9432 H3BTT5;H3BP34;H3BUY6;Q96MC5 H3BTT5 20 35 C16orf45 Uncharacterized protein C16orf45 yes no 2 0.016602 45.864 By MS/MS By matching 1 1 5852300 2652900 3199300 7441 1124 8314 18850;18851 17157 17157 7461 1 YGDFRADDADEFGYSR SARLNLWRYGDFRADD ADEFGYSR________ R Y G S R - 2 2 0 4 0 0 1 2 0 0 0 0 0 2 0 1 0 0 2 0 0 0 16 1 1882.7758 Q7KZF4 Q7KZF4 895 910 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.00014686 93.649 By MS/MS By MS/MS 1 1 28868000 14687000 14180000 7442 2197 8315 18852;18853 17158;17159 17159 7768 2 YGEPGEVFINK EFKRLFAKYGEPGEVF PGEVFINKGKGFGFIK K Y G N K G 0 0 1 0 0 0 2 2 0 1 0 1 0 1 1 0 0 0 1 1 0 0 11 0 1251.6136 P23246 P23246 320 330 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.019101 68.846 By matching By MS/MS 1 1 3267600 1678600 1589000 7443 1620 8316 18854;18855 17160 17160 1 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR DKAERAKKYGGSVGSQ SQEPPTKREYDQCRIQ K Y G K R E 1 1 0 0 0 2 2 4 0 0 0 1 0 0 10 5 1 0 1 3 0 0 31 1 3082.536 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323 E9PS08 37 67 UBXN1 UBX domain-containing protein 1 yes no 3 2.38E-23 100.55 By MS/MS By MS/MS 1 1 92161000 47131000 45030000 7444 36 8317 18856;18857 17161;17162;17163;17164;17165 17164 66;67 5 YGIYAVENEHMNR PGGRGDMKYGIYAVEN VENEHMNRLQSQRAML K Y G N R L 1 1 2 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 2 1 0 0 13 0 1594.7198 H0YJL5;H0YJJ5;Q9UEU0 H0YJL5 29 41 VTI1B Vesicle transport through interaction with t-SNAREs homolog 1B yes no 2 1.1132E-07 125.97 By MS/MS By matching 2 1 12359000 8906600 3452400 7445 1081 8318;8319 18858;18859;18860 17166;17167;17168 17168 7447;7448 3 YGKDATNVGDEGGFAPNILENK LKNVIKEKYGKDATNV APNILENKEGLELLKT K Y G N K E 2 0 3 2 0 0 2 4 0 1 1 2 0 1 1 0 1 0 1 1 0 0 22 1 2308.0972 P06733 P06733 200 221 ENO1 Alpha-enolase yes yes 3 3.4824E-08 90.884 By MS/MS By MS/MS 1 1 18829000 9992200 8837100 7446 1532 8320 18861;18862 17169;17170 17169 2 YGLFKEENPYAR RHDEIRKKYGLFKEEN KEENPYARFENN____ K Y G A R F 1 1 1 0 0 0 2 1 0 0 1 1 0 1 1 0 0 0 2 0 0 0 12 1 1485.7252 A8MXQ1;P53801 A8MXQ1 144 155 PTTG1IP Pituitary tumor-transforming gene 1 protein-interacting protein yes no 3 0.00051395 98.156 By MS/MS By MS/MS 2 1 23788000 15649000 8138300 7447 440 8321;8322 18863;18864;18865 17171;17172;17173 17171 7273;7274 3 YGLFKEENPYARFENN RHDEIRKKYGLFKEEN PYARFENN________ K Y G N N - 1 1 3 0 0 0 3 1 0 0 1 1 0 2 1 0 0 0 2 0 0 0 16 2 1989.9221 A8MXQ1;P53801 A8MXQ1 144 159 PTTG1IP Pituitary tumor-transforming gene 1 protein-interacting protein yes no 2;3 5.8128E-05 101.75 By MS/MS By MS/MS 2 2 49479000 26352000 23128000 7448 440 8323 18866;18867;18868;18869 17174;17175;17176;17177 17174 7273;7274 4 YGLLPSHASYL TTAILQQKYGLLPSHA LPSHASYL________ K Y G Y L - 1 0 0 0 0 0 0 1 1 0 3 0 0 0 1 2 0 0 2 0 0 0 11 0 1219.6237 Q86U90 Q86U90 269 279 YRDC YrdC domain-containing protein, mitochondrial yes yes 2 0.0021958 81.548 By MS/MS By MS/MS 1 1 2475000 1298800 1176200 7449 2234 8324 18870;18871 17178;17179 17178 7769 2 YGLQDSDEEEEEHPSK FKVSHFSKYGLQDSDE EEEEHPSKTSTKKLKT K Y G S K T 0 0 0 2 0 1 5 1 1 0 1 1 0 0 1 2 0 0 1 0 0 0 16 0 1890.7755 P52948 P52948 883 898 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 2;3 4.0499E-06 112.67 By MS/MS By MS/MS 2 2 70983000 39490000 31493000 7450 1759 8325 18872;18873;18874;18875 17180;17181;17182 17182 3323 3 YGLVTYATEPK ASYGVKPKYGLVTYAT VTYATEPKVLIRVSDP K Y G P K V 1 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 2 0 2 1 0 0 11 0 1240.634 CON__Q3KUS7 CON__Q3KUS7 308 318 yes yes 2 0.026583 49.06 By matching By MS/MS 1 1 3677600 2191800 1485800 + 7451 636 8326 18876;18877 17183 17183 7340 0 YGMGTSVER IFICENNRYGMGTSVE GMGTSVERAAASTDYY R Y G E R A 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 1 1 0 1 1 0 0 9 0 998.44913 P08559 P08559 227 235 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.0034674 119.34 By MS/MS By MS/MS 2 2 732130000 381590000 350550000 7452 1543 8327;8328 18878;18879;18880;18881 17184;17185;17186;17187;17188;17189 17189 187 2836;6661 6 YGNIIAYDHSR DQNRAKNRYGNIIAYD IIAYDHSRVILQPVED R Y G S R V 1 1 1 1 0 0 0 1 1 2 0 0 0 0 0 1 0 0 2 0 0 0 11 0 1307.6258 Q15262;H0Y6V4;A0A0G2JQF6;H0Y6P5;Q5TG12;E9PGC5;E7EPS8;P28827 Q15262 916 926 PTPRK;PTPRM Receptor-type tyrosine-protein phosphatase kappa;Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase mu no no 2 0.010971 63.184 By MS/MS 1 2783000 0 2783000 7453 1981;718 8329 18882 17190 17190 7359 1 YGQFSGLNPGGR PADKNKGKYGQFSGLN SGLNPGGRPITPPRNS K Y G G R P 0 1 1 0 0 1 0 4 0 0 1 0 0 1 1 1 0 0 1 0 0 0 12 0 1251.5996 P62136 P62136 306 317 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 2 0.0018376 83.499 By MS/MS 1 5127900 5127900 0 7454 1791 8330 18883 17191 17191 7656 1 YGQFSGLNPGGRPITPPR PADKNKGKYGQFSGLN GRPITPPRNSAKAKK_ K Y G P R N 0 2 1 0 0 1 0 4 0 1 1 0 0 1 4 1 1 0 1 0 0 0 18 1 1912.9908 P62136 P62136 306 323 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 3 8.2967E-05 79.804 By MS/MS By MS/MS 2 2 33205000 16944000 16262000 7455 1791 8331 18884;18885;18886;18887 17192;17193;17194 17192 6744;7656 3 YGRAESPDLR SVGKWQDRYGRAESPD RAESPDLRRLPGAIDV R Y G L R R 1 2 0 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 10 1 1162.5731 Q6UN15;A0A0B4J203 Q6UN15 299 308 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 2 0.029207 62.694 By MS/MS By matching 1 1 59481000 28988000 30492000 7456 2168 8332 18888;18889 17195 17195 4324 1 YGSFEEAEASYPILNR GRDSGMEKYGSFEEAE ASYPILNRAREGDSHK K Y G N R A 2 1 1 0 0 0 3 1 0 1 1 0 0 1 1 2 0 0 2 0 0 0 16 0 1844.8581 O95425 O95425 966 981 SVIL Supervillin yes yes 2 0.014226 56.599 By MS/MS 1 2318700 0 2318700 7457 1489 8333 18890 17196 17196 2760 1 YGSIVDDER LPSLQRPRYGSIVDDE GSIVDDERLSAEEMDE R Y G E R L 0 1 0 2 0 0 1 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 9 0 1052.4775 Q13576 Q13576 14 22 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.0073577 79.23 By matching By MS/MS 1 1 18830000 9612200 9217700 7458 1926 8334 18891;18892 17197 17197 3717 1 YGSIVDDERLSAEEMDER LPSLQRPRYGSIVDDE SAEEMDERRRQNIAYE R Y G E R R 1 2 0 3 0 0 4 1 0 1 1 0 1 0 0 2 0 0 1 1 0 0 18 1 2112.927 Q13576 Q13576 14 31 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 3 0.0063575 54.74 By MS/MS By MS/MS 1 1 16080000 9352400 6727800 7459 1926 8335 18893;18894 17198;17199 17198 3717 2 YGSKNTDQGVYLGLSK ________________ GVYLGLSKTQVLSPAT R Y G S K T 0 0 1 1 0 1 0 3 0 0 2 2 0 0 0 2 1 0 2 1 0 0 16 1 1728.8683 E9PP18;E9PRW9;E9PNU4;Q13190 E9PP18 7 22 STX5 Syntaxin-5 yes no 2 2.8061E-07 120.08 By MS/MS By MS/MS 1 1 26965000 13950000 13014000 7460 834 8336 18895;18896 17200;17201 17200 1508 2 YGSPPQRDPNWNGER PRRIRKPRYGSPPQRD DPNWNGERLNKSHRHQ R Y G E R L 0 2 2 1 0 1 1 2 0 0 0 0 0 0 3 1 0 1 1 0 0 0 15 1 1771.8026 J3KSY7;O15234 J3KSY7 150 164 CASC3 Protein CASC3 yes no 3 0.0025203 71.601 By MS/MS By matching 1 1 9319100 4724200 4594800 7461 1244 8337 18897;18898 17202 17202 2255;7478 1 YGSPPQRDPNWNGERLNK PRRIRKPRYGSPPQRD WNGERLNKSHRHQGLG R Y G N K S 0 2 3 1 0 1 1 2 0 0 1 1 0 0 3 1 0 1 1 0 0 0 18 2 2127.0246 J3KSY7;O15234 J3KSY7 150 167 CASC3 Protein CASC3 yes no 3 0.0051521 59.154 By MS/MS By MS/MS 1 1 12076000 6027900 6048500 7462 1244 8338 18899;18900 17203;17204 17203 2255;7478 2 YGSRDDLVAGPGFGGAR GPRGPALRYGSRDDLV GPGFGGARNPALQTSL R Y G A R N 2 2 0 2 0 0 0 5 0 0 1 0 0 1 1 1 0 0 1 1 0 0 17 1 1693.8172 Q9ULC8 Q9ULC8 604 620 ZDHHC8 Probable palmitoyltransferase ZDHHC8 yes yes 3 1.6371E-05 90.561 By MS/MS By MS/MS 1 1 4138600 2633900 1504700 7463 2840 8339 18901;18902 17205;17206 17205 5843 2 YGVQADRVDK YSSGFGGKYGVQADRV VQADRVDKSAVGFDYQ K Y G D K S 1 1 0 2 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 2 0 0 10 1 1149.5778 Q14247 Q14247 162 171 CTTN Src substrate cortactin yes yes 2 0.0085877 70.256 By MS/MS 1 0 0 0 7464 1945 8340 18903 17207 17207 7704 1 YGVYEDENYEVGSDDEEIPFK ERELDEGRYGVYEDEN DDEEIPFKCFICRQSF R Y G F K C 0 0 1 3 0 0 5 2 0 1 0 1 0 1 1 1 0 0 3 2 0 0 21 0 2496.0493 O15541 O15541 241 261 RNF113A RING finger protein 113A yes yes 2;3 0.0061514 50.358 By matching By MS/MS 2 2 61809000 36985000 24825000 7465 1369 8341 18904;18905;18906;18907 17208;17209 17209 2505 2 YGYLSLPKPMK FEGRRGEKYGYLSLPK LSLPKPMKNNANLKSL K Y G M K N 0 0 0 0 0 0 0 1 0 0 2 2 1 0 2 1 0 0 2 0 0 0 11 1 1295.6948 Q9UBT7 Q9UBT7 534 544 CTNNAL1 Alpha-catulin yes yes 2 0.0040447 85.973 By MS/MS By MS/MS 1 1 6245800 3855600 2390200 7466 2802 8342 18908;18909 17210;17211 17211 5744 2 YHELPTLEER CTEQEMPRYHELPTLE ELPTLEERSGPLHPGA R Y H E R S 0 1 0 0 0 0 3 0 1 0 2 0 0 0 1 0 1 0 1 0 0 0 10 0 1285.6303 Q92692 Q92692 454 463 PVRL2 Nectin-2 yes yes 2;3 0.0021046 82.287 By MS/MS By MS/MS 1 2 14304000 8148000 6156300 7467 2433 8343 18910;18911;18912 17212;17213;17214 17212 7827 3 YHGHSMSDPGVSYR LMELQTYRYHGHSMSD SDPGVSYRTREEIQEV R Y H Y R T 0 1 0 1 0 0 0 2 2 0 0 0 1 0 1 3 0 0 2 1 0 0 14 0 1591.6838 P08559;Q5JPU3;P29803 P08559 289 302 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 2;3 1.9163E-07 122.1 By MS/MS By MS/MS 8 8 826590000 365410000 461180000 7468 1543 8344;8345;8346;8347 18913;18914;18915;18916;18917;18918;18919;18920;18921;18922;18923;18924;18925;18926;18927;18928 17215;17216;17217;17218;17219;17220;17221;17222;17223;17224;17225;17226;17227 17219 188 2837;2838;2839 13 YHSLGNISR GAEKEHKRYHSLGNIS HSLGNISRGGSGGSGS R Y H S R G 0 1 1 0 0 0 0 1 1 1 1 0 0 0 0 2 0 0 1 0 0 0 9 0 1045.5305 M0R0L4;R4GMW3;G5E9A7;Q09019 M0R0L4 36 44 DMWD Dystrophia myotonica WD repeat-containing protein yes no 3 0.0034657 80.979 By MS/MS 1 0 0 0 7469 992 8348 18929 17228 17228 1817 1 YIASVQGSTPSPR RSKADVERYIASVQGS QGSTPSPRQKSMKGFY R Y I P R Q 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 3 1 0 1 1 0 0 13 0 1361.6939 P49792;F8WBP7 P49792 11 23 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 2 2.0187E-10 138.77 By MS/MS By MS/MS 1 1 18394000 9337100 9056900 7470 1730 8349 18930;18931 17229;17230 17230 3268 2 YIDQEELNK KTKKIKEKYIDQEELN IDQEELNKTKPIWTRN K Y I N K T 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1150.5506 P07900;Q14568;P08238;Q58FF8 P08238 276 284 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2 0.006997 104.75 By MS/MS By MS/MS 1 1 33764000 14624000 19140000 7471 1542;1540 8350 18932;18933 17231;17232 17231 2 YIDQEELNKTK KTKKIKEKYIDQEELN QEELNKTKPIWTRNPD K Y I T K P 0 0 1 1 0 1 2 0 0 1 1 2 0 0 0 0 1 0 1 0 0 0 11 1 1379.6933 P07900;Q14568;P08238;Q58FF8 P08238 276 286 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2 0.025425 57.859 By matching By MS/MS 1 1 4468400 2366500 2101900 7472 1542;1540 8351 18934;18935 17233 17233 0 YIEIDSDEEPR PGKSQKRKYIEIDSDE IDSDEEPRGELLSLRD K Y I P R G 0 1 0 2 0 0 3 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 11 0 1364.6096 E7EW05;Q9NVU7 E7EW05 543 553 SDAD1 Protein SDA1 homolog yes no 2 0.00072763 105.65 By MS/MS By MS/MS 1 1 14102000 7416900 6684600 7473 746 8352 18936;18937 17234;17235 17235 1355 2 YIFINITDNSIPELEKSFK FQPGERYKYIFINITD PELEKSFKVELLNLEG K Y I F K V 0 0 2 1 0 0 2 0 0 4 1 2 0 2 1 2 1 0 1 0 0 0 19 1 2270.1835 Q8WXG9 Q8WXG9 1787 1805 GPR98 G-protein coupled receptor 98 yes yes 2 0.027432 40.577 By MS/MS By matching 1 1 32352000 18979000 13374000 7474 2413 8353 18938;18939 17236 17236 7821 1 YILTPGGLAEQPGQAEHQPESPLNETQR GGTPSDCRYILTPGGL SPLNETQRLLLLQQGL R Y I Q R L 2 1 1 0 0 4 4 3 1 1 3 0 0 0 4 1 2 0 1 0 0 0 28 0 3059.4948 H0YNK6;Q06418 H0YNK6 804 831 TYRO3 Receptor protein-tyrosine kinase;Tyrosine-protein kinase receptor TYRO3 yes no 3 0.020705 45.099 By MS/MS By matching 1 1 6495100 3360300 3134800 7475 1104 8354 18940;18941 17237 17237 7457 0 YISITVPSK LKFNNSRKYISITVPS ISITVPSKTQTMSPHI K Y I S K T 0 0 0 0 0 0 0 0 0 2 0 1 0 0 1 2 1 0 1 1 0 0 9 0 1006.5699 Q9H1N7 Q9H1N7 43 51 SLC35B3 Adenosine 3-phospho 5-phosphosulfate transporter 2 yes yes 2 0.020182 57.96 By MS/MS 1 1382600 0 1382600 7476 2639 8355 18942 17238 17238 7887 1 YISPDQLADLYK KSPDDPSRYISPDQLA DQLADLYKSFIKDYPV R Y I Y K S 1 0 0 2 0 1 0 0 0 1 2 1 0 0 1 1 0 0 2 0 0 0 12 0 1424.7187 P06733 P06733 270 281 ENO1 Alpha-enolase yes yes 2 0.00018152 115.78 By MS/MS By MS/MS 1 1 12611000 7100500 5510100 7477 1532 8356 18943;18944 17239;17240 17239 2 YITPESSPVR RQDEEALRYITPESSP TPESSPVRKAPRPRGR R Y I V R K 0 1 0 0 0 0 1 0 0 1 0 0 0 0 2 2 1 0 1 1 0 0 10 0 1147.5873 Q8TBP0 Q8TBP0 97 106 TBC1D16 TBC1 domain family member 16 yes yes 2 0.010781 70.488 By MS/MS By matching 1 1 4652300 2456600 2195800 7478 2374 8357 18945;18946 17241 17241 4752;4753 1 YKDLDEDELLGNLSETELK PFRKDLEKYKDLDEDE NLSETELKQLE_____ K Y K L K Q 0 0 1 3 0 0 4 1 0 0 5 2 0 0 0 1 1 0 1 0 0 0 19 1 2223.0794 H0YNU8;Q9NYL9 H0YNU8 12 30 TMOD3 Tropomodulin-3 yes no 3 0.0023924 62.193 By MS/MS By MS/MS 1 1 8139600 5022700 3117000 7479 1106 8358 18947;18948 17242;17243 17242 2031 2 YKEDYEK GVAASKVKYKEDYEKN KYKEDYEKNKGKADYN K Y K E K N 0 0 0 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 2 0 0 0 7 1 973.43928 A0A087X1N7;P20929 A0A087X1N7 348 354 NEB Nebulin yes no 1 0.030924 40.778 By MS/MS By matching 1 1 14036000 8284900 5751400 7480 140 8359 18949;18950 17244 17244 7181 0 YKNILPFDHTR QENKNKNRYKNILPFD ILPFDHTRVVLHDGDP R Y K T R V 0 1 1 1 0 0 0 0 1 1 1 1 0 1 1 0 1 0 1 0 0 0 11 1 1402.7357 Q06124 Q06124 279 289 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 3 0.025061 48.115 By matching By MS/MS 1 1 4843600 1772600 3071100 7481 1856 8360 18951;18952 17245 17245 7671 1 YKSTTSVSEEDVSSR PPRTVSGRYKSTTSVS SEEDVSSRYSRTDRSG R Y K S R Y 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 5 2 0 1 2 0 0 15 1 1673.7744 Q96IZ0 Q96IZ0 226 240 PAWR PRKC apoptosis WT1 regulator protein yes yes 2 0.0021015 78.902 By MS/MS By MS/MS 1 1 11632000 6905000 4727300 7482 2503 8361 18953;18954 17246;17247 17246 5038;5039 2 YLAEFATGNDR KMKGDYHRYLAEFATG EFATGNDRKEAAENSL R Y L D R K 2 1 1 1 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 11 0 1255.5833 P62258;K7EM20 P62258 131 141 YWHAE 14-3-3 protein epsilon yes no 2 0.0021761 100.02 By MS/MS By MS/MS 1 1 5877000 2948200 2928800 7483 1793 8362 18955;18956 17248;17249 17248 2 YLAEFPEALARQHSR GLGRSFMRYLAEFPEA ALARQHSRDSGSPGHG R Y L S R D 3 2 0 0 0 1 2 0 1 0 2 0 0 1 1 1 0 0 1 0 0 0 15 1 1786.9115 A0A087X0K8;A0A087WW83;Q6PRD1 A0A087X0K8 722 736 GPR179 Probable G-protein coupled receptor 179 yes no 2 0.026651 47.894 By MS/MS By matching 1 1 6599100 3297300 3301900 7484 73 8363 18957;18958 17250 17250 7161 1 YLAEKYEWDVAEAR QELKQRARYLAEKYEW EWDVAEARKIWCFGPD R Y L A R K 3 1 0 1 0 0 3 0 0 0 1 1 0 0 0 0 0 1 2 1 0 0 14 1 1741.8312 P13639 P13639 634 647 EEF2 Elongation factor 2 yes yes 3 0.016777 55.724 By matching By MS/MS 1 1 2517200 1327600 1189500 7485 1575 8364 18959;18960 17251 17251 0 YLCEGTESPYQTGQLHPAIR SRLLDVPRYLCEGTES GQLHPAIRVADLLQHI R Y L I R V 1 1 0 0 1 2 2 2 1 1 2 0 0 0 2 1 2 0 2 0 0 0 20 0 2319.0954 Q15262;H0Y6V4;A0A0G2JQF6;H0Y6P5;Q5TG12;E9PGC5 Q15262 849 868 PTPRK Receptor-type tyrosine-protein phosphatase kappa;Protein-tyrosine-phosphatase yes no 3 0.020482 46.159 By MS/MS By MS/MS 1 2 13009000 1731800 11277000 7486 1981 8365;8366 18961;18962;18963 17252;17253 17253 3864;7711 1 YLDLSNNRLKSVTWYLLAGLR FEFNKELRYLDLSNNR WYLLAGLRYLDLSFND R Y L L R Y 1 2 2 1 0 0 0 1 0 0 6 1 0 0 0 2 1 1 2 1 0 0 21 2 2494.3696 Q9BXR5 Q9BXR5 100 120 TLR10 Toll-like receptor 10 yes yes 3 0.029729 40.404 By matching By MS/MS 1 1 8438000 5538700 2899300 7487 2600 8367 18964;18965 17254 17254 7875 0 YLEESDEDDLF VRAKKPIKYLEESDED ESDEDDLF________ K Y L L F - 0 0 0 3 0 0 3 0 0 0 2 0 0 1 0 1 0 0 1 0 0 0 11 0 1373.5511 P11388;J3QR57 P11388 1521 1531 TOP2A DNA topoisomerase 2-alpha yes no 2 1.754E-14 169.76 By MS/MS By MS/MS 1 1 515160000 283010000 232150000 7488 1565 8368 18966;18967 17255;17256 17255 2873 2 YLGNATAIFFLPDEGK SSWVLLMKYLGNATAI FFLPDEGKLQHLENEL K Y L G K L 2 0 1 1 0 0 1 2 0 1 2 1 0 2 1 0 1 0 1 0 0 0 16 0 1754.8879 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 268 283 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 2.2682E-23 149.57 By MS/MS By MS/MS 1 1 11715000 4773800 6941700 7489 2 8369 18968;18969 17257;17258 17257 0 2 YLGSPITTVPK NLVDSEMKYLGSPITT SPITTVPKLDKNPNLG K Y L P K L 0 0 0 0 0 0 0 1 0 1 1 1 0 0 2 1 2 0 1 1 0 0 11 0 1174.6598 P30307;D6RJC2 P30307 165 175 CDC25C M-phase inducer phosphatase 3 yes no 2 0.0045046 77.597 By MS/MS By MS/MS 1 1 10593000 6139700 4453600 7490 1654 8370 18970;18971 17259;17260;17261;17262 17262 3057 4 YLHAPGPTTAVSYMSVK RSSVTRLRYLHAPGPT AVSYMSVKCVDARKNH R Y L V K C 2 0 0 0 0 0 0 1 1 0 1 1 1 0 2 2 2 0 2 2 0 0 17 0 1820.9131 H0YDL2 H0YDL2 39 55 WLS yes yes 3 0.026111 46.408 By MS/MS 1 0 0 0 7491 1064 8371 18972 17263 17263 7442 1 YLLGDAPVSPSSQK HLRGQEHKYLLGDAPV PVSPSSQKLKRKAEED K Y L Q K L 1 0 0 1 0 1 0 1 0 0 2 1 0 0 2 3 0 0 1 1 0 0 14 0 1460.7511 Q9NYB0;H3BMI8 Q9NYB0 195 208 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes no 2 2.3074E-58 197.73 By MS/MS By MS/MS 1 1 250240000 133530000 116700000 7492 2756 8372 18973;18974 17264;17265 17264 5635 2 YLLSQSSPAPLTAAEEELR VSLHGYKKYLLSQSSP TAAEEELRQIKINEVQ K Y L L R Q 3 1 0 0 0 1 3 0 0 0 4 0 0 0 2 3 1 0 1 0 0 0 19 0 2074.0582 F8VS81;Q12792 F8VS81 175 193 TWF1 Twinfilin-1 yes no 2;3 1.0847E-32 147.09 By MS/MS By MS/MS 2 2 99259000 63847000 35412000 7493 915 8373 18975;18976;18977;18978 17266;17267;17268;17269 17269 1645;1646 4 YLMEEDEDAYKK QNVADYMRYLMEEDED EDEDAYKKQFSQYIKN R Y L K K Q 1 0 0 2 0 0 3 0 0 0 1 2 1 0 0 0 0 0 2 0 0 0 12 1 1532.6705 P46777 P46777 210 221 RPL5 60S ribosomal protein L5 yes yes 3 0.00088814 97.163 By MS/MS By MS/MS 1 1 3395200 1647800 1747400 7494 1710 8374 18979;18980 17270;17271 17271 2 YLQDQLSPLTR KELRQKVKYLQDQLSP DQLSPLTRQREYQEKE K Y L T R Q 0 1 0 1 0 2 0 0 0 0 3 0 0 0 1 1 1 0 1 0 0 0 11 0 1332.7038 E7EMV7;A0A0A0MRZ4;Q15025;H0YC17 E7EMV7 344 354 TNIP1 TNFAIP3-interacting protein 1 yes no 2 0.0020544 92.295 By MS/MS By MS/MS 1 1 6677500 4470600 2206800 7495 205 8375 18981;18982 17272;17273 17272 373 2 YLSDILVNEIK CQRCNELRYLSDILVN DILVNEIKAKRIQLSR R Y L I K A 0 0 1 1 0 0 1 0 0 2 2 1 0 0 0 1 0 0 1 1 0 0 11 0 1305.718 P10911 P10911 305 315 MCF2 Proto-oncogene DBL;MCF2-transforming protein;DBL-transforming protein yes yes 2 0.020154 53.567 By MS/MS 1 2393800 0 2393800 7496 1558 8376 18983 17274 17274 2862;7559 1 YLSFTPPEK DSNTVKQKYLSFTPPE LSFTPPEKDGFPSGTP K Y L E K D 0 0 0 0 0 0 1 0 0 0 1 1 0 1 2 1 1 0 1 0 0 0 9 0 1080.5492 Q13177 Q13177 139 147 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 2 0.0036353 108.47 By MS/MS By MS/MS 1 1 11437000 6240200 5196700 7497 1901 8377 18984;18985 17275;17276 17275 3636 2 YLSFTPPEKDGFPSGTPALNAK DSNTVKQKYLSFTPPE GTPALNAKGTEAPAVV K Y L A K G 2 0 1 1 0 0 1 2 0 0 2 2 0 2 4 2 2 0 1 0 0 0 22 1 2336.1689 Q13177 Q13177 139 160 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 3 0.0069417 49.186 By MS/MS 1 53753000 53753000 0 7498 1901 8378 18986 17277 17277 3636 1 YLSVPPSPNISTSESR PSSSPDPRYLSVPPSP NISTSESRSPPEGDTT R Y L S R S 0 1 1 0 0 0 1 0 0 1 1 0 0 0 3 5 1 0 1 1 0 0 16 0 1732.8632 Q9BTC0 Q9BTC0 1024 1039 DIDO1 Death-inducer obliterator 1 yes yes 2 0.0038813 66.246 By MS/MS By MS/MS 1 1 6422200 2229800 4192400 7499 2576 8379 18987;18988 17278;17279 17279 5208 2 YLVDGTKPNAGSEEISSEDDELVEEK LFQYPDTRYLVDGTKP DDELVEEKKQQRRRVP R Y L E K K 1 0 1 3 0 0 6 2 0 1 2 2 0 0 1 3 1 0 1 2 0 0 26 1 2852.3087 Q9NY61 Q9NY61 305 330 AATF Protein AATF yes yes 3 1.8677E-06 75.956 By MS/MS By MS/MS 2 2 96023000 57723000 38300000 7500 2755 8380;8381 18989;18990;18991;18992 17280;17281;17282 17280 5631;5632;5633 3 YLVLDEADR KIGLDFCKYLVLDEAD LVLDEADRMLDMGFEP K Y L D R M 1 1 0 2 0 0 1 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 9 0 1092.5451 A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O00571;O15523;D6RCM4;Q9NQI0 A0A0D9SFB3 343 351 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 2 0.011508 81.548 By MS/MS By MS/MS 1 1 2284800 1054000 1230800 7501 311 8382 18993;18994 17283;17284 17283 2 YMEDSTYYK LGDFGLSRYMEDSTYY MEDSTYYKASKGKLPI R Y M Y K A 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 1 0 3 0 0 0 9 0 1198.4852 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397 E9PEI4 198 206 PTK2 Focal adhesion kinase 1 yes no 2 0.00097812 139.97 By MS/MS By MS/MS 1 1 9292500 3980100 5312400 7502 728 8383 18995;18996 17285;17286 17286 7362 2 YMLTHQELASDGEIETK KALAKCEKYMLTHQEL SDGEIETKLIKGDIYK K Y M T K L 1 0 0 1 0 1 3 1 1 1 2 1 1 0 0 1 2 0 1 0 0 0 17 0 1963.9197 Q02241;H7BYN4 Q02241 858 874 KIF23 Kinesin-like protein KIF23;Kinesin-like protein yes no 2;3 3.2603E-05 92.307 By MS/MS By MS/MS 3 3 46799000 25058000 21741000 7503 1838 8384;8385 18997;18998;18999;19000;19001;19002 17287;17288;17289;17290 17289 237 3442 4 YMNSDTTSPELR RWSDYVERYMNSDTTS DTTSPELREHLAQKPV R Y M L R E 0 1 1 1 0 0 1 0 0 0 1 0 1 0 1 2 2 0 1 0 0 0 12 0 1412.6242 Q96ST3 Q96ST3 1105 1116 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 9.298E-11 153.14 By MS/MS By MS/MS 2 2 60918000 32175000 28743000 7504 2542 8386;8387 19003;19004;19005;19006 17291;17292;17293 17291 341 5132 3 YMSFTDK KKTSNSQKYMSFTDKS KYMSFTDKSAEDYNSS K Y M D K S 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 1 1 0 1 0 0 0 7 0 890.3844 H0YCM0;E9PM17;B3KNX7;Q13153 H0YCM0 33 39 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 2 0.017243 91.906 By MS/MS By MS/MS 1 1 12257000 7377100 4880000 7505 473 8388 19007;19008 17294;17295 17294 903 2 YMSQMSVPEQAELEK PHTFPHSRYMSQMSVP PEQAELEKLKQRINFS R Y M E K L 1 0 0 0 0 2 3 0 0 0 1 1 2 0 1 2 0 0 1 1 0 0 15 0 1768.8012 A6NNN6;E7ETA6;Q15154;E5RGQ4;E9PGW9;E7EV93 A6NNN6 88 102 PCM1 Pericentriolar material 1 protein yes no 2 0.00034052 97.129 By MS/MS By MS/MS 1 1 9306600 5623300 3683200 7506 423 8389 19009;19010 17296;17297 17296 798 2 YMSQMSVPEQAELEKLK PHTFPHSRYMSQMSVP QAELEKLKQRINFSDL R Y M L K Q 1 0 0 0 0 2 3 0 0 0 2 2 2 0 1 2 0 0 1 1 0 0 17 1 2009.9802 A6NNN6;E7ETA6;Q15154;E5RGQ4;E9PGW9;E7EV93 A6NNN6 88 104 PCM1 Pericentriolar material 1 protein yes no 3 0.009992 51.235 By matching By MS/MS 1 1 6561500 4220300 2341200 7507 423 8390 19011;19012 17298;17299 17298 798 2 YNASSVTPESLR ENRSAIVKYNASSVTP SVTPESLRKAIEAVSP K Y N L R K 1 1 1 0 0 0 1 0 0 0 1 0 0 0 1 3 1 0 1 1 0 0 12 0 1322.6466 Q04656 Q04656 321 332 ATP7A Copper-transporting ATPase 1 yes yes 2 0.0011291 100.73 By matching By MS/MS 1 1 3684100 1724500 1959600 7508 1849 8391 19013;19014 17300 17300 3478 1 YNDWSDDDDDSNESK AGDCSGARYNDWSDDD DDDSNESKSIVWYPPW R Y N S K S 0 0 2 6 0 0 1 0 0 0 0 1 0 0 0 3 0 1 1 0 0 0 15 0 1803.6344 Q9UH62;H3BV87 Q9UH62 57 71 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes no 2 0.012612 79.771 By MS/MS 1 0 0 0 7509 2812 8392 19015 17301 17301 5768 1 YNILGTNTIMDK HAAENPGKYNILGTNT GTNTIMDKMMVAGFKK K Y N D K M 0 0 2 1 0 0 0 1 0 2 1 1 1 0 0 0 2 0 1 0 0 0 12 0 1381.6912 Q00839 Q00839 525 536 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.0025531 96.143 By MS/MS By MS/MS 1 1 6094500 3154800 2939700 7510 1827 8393 19016;19017 17302;17303 17303 2 YNLDASEEEDSNK EDDADLSKYNLDASEE SEEEDSNKKKSNRRSR K Y N N K K 1 0 2 2 0 0 3 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 13 0 1512.6216 O95218 O95218 183 195 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.00027646 111.07 By MS/MS By MS/MS 1 1 20209000 9484900 10724000 7511 1477 8394 19018;19019 17304;17305 17305 2733 2 YNLDASEEEDSNKKK EDDADLSKYNLDASEE EEDSNKKKSNRRSRSK K Y N K K S 1 0 2 2 0 0 3 0 0 0 1 3 0 0 0 2 0 0 1 0 0 0 15 2 1768.8115 O95218 O95218 183 197 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 0.0017903 71.558 By matching By MS/MS 1 1 7483300 4491300 2992000 7512 1477 8395 19020;19021 17306 17306 2733 1 YNNENTSKQYSLFKVTR AATESLAKYNNENTSK YSLFKVTRASSQWVVG K Y N T R A 0 1 3 0 0 1 1 0 0 0 1 2 0 1 0 2 2 0 2 1 0 0 17 2 2091.0385 C9JC68;E9PG08;Q9UGM5 C9JC68 30 46 FETUB Fetuin-B yes no 3 0.017748 53.3 By MS/MS 1 1329900 0 1329900 7513 584 8396 19022 17307 17307 1065;7319 0 YNSHSLENESIKR MASASTSKYNSHSLEN LENESIKRTSRDGVNR K Y N K R T 0 1 2 0 0 0 2 0 1 1 1 1 0 0 0 3 0 0 1 0 0 0 13 1 1575.7641 Q13496;C9J2A2 Q13496 9 21 MTM1 Myotubularin yes no 3 0.0048269 60.158 By matching By MS/MS 1 1 5812700 3597600 2215200 7514 1919 8397 19023;19024 17308 17308 3702 1 YPEAAGPR RERFRGFRYPEAAGPR YPEAAGPREALSRLRE R Y P P R E 2 1 0 0 0 0 1 1 0 0 0 0 0 0 2 0 0 0 1 0 0 0 8 0 859.41882 Q9BRR0;Q969J2 Q9BRR0 54 61 ZKSCAN3;ZKSCAN4 Zinc finger protein with KRAB and SCAN domains 3;Zinc finger protein with KRAB and SCAN domains 4 yes no 2 0.019091 60.788 By MS/MS 1 5471000 5471000 0 7515 2573 8398 19025 17309 17309 7870 1 YPIEHGIITNWDDMEK KRGILTLKYPIEHGII TNWDDMEKIWHHSFYN K Y P E K I 0 0 1 2 0 0 2 1 1 3 0 1 1 0 1 0 1 1 1 0 0 0 16 0 1959.9037 P63267;P68133;P68032;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63267 70 85 ACTG2;ACTA1;ACTC1;ACTA2 Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle yes no 3 0.0015388 66.059 By MS/MS By MS/MS 2 2 14664000 6744500 7919100 7516 1799 8399;8400 19026;19027;19028;19029 17310;17311;17312;17313 17312 230 4 YPPSHSSEPDK Y P D K 0 0 0 1 0 0 1 0 1 0 0 1 0 0 3 3 0 0 1 0 0 0 11 0 1242.5517 REV__H3BPW3 yes no 2 0.019457 56.432 By matching By MS/MS 1 2 4817000 1925400 2891600 + 7517 2977 8401 19030;19031;19032 17314 17314 7973 1 YPSLGQKPGGSDFLMK EEAKLKAKYPSLGQKP GGSDFLMKRLQKGQKY K Y P M K R 0 0 0 1 0 1 0 3 0 0 2 2 1 1 2 2 0 0 1 0 0 0 16 1 1723.8603 O43768;A6NMQ3;Q5T5H1 O43768 41 56 ENSA Alpha-endosulfine yes no 3 0.00091453 72.662 By MS/MS By matching 1 1 4844300 3085300 1759000 7518 1394 8402 19033;19034 17315;17316 17316 2562 2 YPSSISSSPQKDLTQAK QRSTQTRRYPSSISSS QKDLTQAKNGFSSVQA R Y P A K N 1 0 0 1 0 2 0 0 0 1 1 2 0 0 2 5 1 0 1 0 0 0 17 1 1835.9265 F8W726;Q14157 F8W726 613 629 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.0063686 55.66 By MS/MS By MS/MS 1 1 16850000 8649200 8200600 7519 937 8403 19035;19036 17317;17318 17317 1684;1685;1686;1687 2 YQDEVFGGFVTEPQEESEEEVEEPEER YVHNDIFRYQDEVFGG EVEEPEERQQTPEVVP R Y Q E R Q 0 1 0 1 0 2 11 2 0 0 0 0 0 2 2 1 1 0 1 3 0 0 27 0 3215.3579 Q13283 Q13283 133 159 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 3;4 8.9249E-08 79.558 By MS/MS By MS/MS 2 2 985520000 502840000 482670000 7520 1909 8404 19037;19038;19039;19040 17319;17320;17321 17319 3661 3 YQEDTCYGDAGSAFAVHDLEEDTWYATGILSFDK TFCAGMSKYQEDTCYG TGILSFDKSCAVAEYG K Y Q D K S 4 0 0 5 1 1 3 3 1 1 2 1 0 2 0 2 3 1 3 1 0 0 34 0 3873.6628 A0A087WU08;A0A0C4DGL8;J3QLC9;J3QR68;H0Y300;P00738 A0A087WU08 221 254 HP Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain yes no 3 0.00049986 54.255 By MS/MS 1 17904000 0 17904000 7521 37 8405 19041 17322 17322 1 YQEQGGEASPQRTWEQQQEVVSR EAARREQRYQEQGGEA QQQEVVSRNRNEQESA R Y Q S R N 1 2 0 0 0 6 4 2 0 0 0 0 0 0 1 2 1 1 1 2 0 0 23 1 2719.2586 H0Y5J4;Q9UJU6 H0Y5J4 153 175 DBNL Drebrin-like protein yes no 3 0.011893 46.178 By MS/MS By MS/MS 1 1 33545000 17747000 15799000 7522 1027 8406 19042;19043 17323;17324 17323 1909 2 YQESPGIQMK SDTPNPEKYQESPGIQ ESPGIQMKTRLKEGAS K Y Q M K T 0 0 0 0 0 2 1 1 0 1 0 1 1 0 1 1 0 0 1 0 0 0 10 0 1179.5594 Q9UHI6;E9PJ60 Q9UHI6 711 720 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 1.7613E-05 141.1 By MS/MS By MS/MS 1 1 13610000 7243800 6365900 7523 2814 8407 19044;19045 17325;17326 17326 5781 2 YQEYIPVQTGAHADLNPFYQK SKAGGIKKYQEYIPVQ DLNPFYQKYSSRTQHA K Y Q Q K Y 2 0 1 1 0 3 1 1 1 1 1 1 0 1 2 0 1 0 3 1 0 0 21 0 2481.1965 A0A087WYN9;Q7Z478 A0A087WYN9 808 828 DHX29 ATP-dependent RNA helicase DHX29 yes no 3 9.119E-10 101.28 By MS/MS By MS/MS 1 1 19730000 9164500 10565000 7524 98 8408 19046;19047 17327;17328 17328 7166 2 YQHPPEYGAARPAQDISLPLSAR RTEGQLMRYQHPPEYG ISLPLSARNSQPHSPT R Y Q A R N 4 2 0 1 0 2 1 1 1 1 2 0 0 0 4 2 0 0 2 0 0 0 23 1 2536.2823 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 281 303 AMOT Angiomotin yes no 4 0.00067027 56.748 By MS/MS By matching 1 1 5842300 3355600 2486700 7525 2051 8409 19048;19049 17329 17329 7737 1 YQKSTELLIR VALREIRRYQKSTELL KSTELLIRKLPFQRLV R Y Q I R K 0 1 0 0 0 1 1 0 0 1 2 1 0 0 0 1 1 0 1 0 0 0 10 1 1249.703 K7EMV3;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431;K7EP01;Q5TEC6;Q6NXT2 K7EMV3 55 64 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2;H3F3C Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 2 0.0066423 77.674 By MS/MS By matching 1 1 11279000 5852600 5426700 7526 477 8410 19050;19051 17330 17330 907 1 YQPLASTASDNDFVTPEPR KKPSTGSRYQPLASTA DFVTPEPRRTTRRHPN R Y Q P R R 2 1 1 2 0 1 1 0 0 0 1 0 0 1 3 2 2 0 1 1 0 0 19 0 2106.9858 Q15021 Q15021 1325 1343 NCAPD2 Condensin complex subunit 1 yes yes 2;3 2.4054E-14 128.05 By MS/MS By MS/MS 3 4 250140000 141260000 108880000 7527 1968 8411;8412 19052;19053;19054;19055;19056;19057;19058 17331;17332;17333;17334;17335 17332 3837;3838;6828 5 YQQPFEDFR REGSFESRYQQPFEDF QQPFEDFRISQEHLAD R Y Q F R I 0 1 0 1 0 2 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 9 0 1228.5513 P19174;V9GY71;V9GYH5 P19174 1253 1261 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 2 0.001011 124.98 By MS/MS By MS/MS 1 1 48548000 23480000 25068000 7528 1603 8413 19059;19060 17336;17337 17336 7570 2 YRIQEQESSGEEDSDLSPEER AAEGLEPKYRIQEQES SDLSPEEREKKRQFEM K Y R E R E 0 2 0 2 0 2 6 1 0 1 1 0 0 0 1 4 0 0 1 0 0 0 21 1 2482.0732 E7EMN6;G1AUC5;Q6NXS1;P41236 E7EMN6 88 108 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 yes no 3 0.0097204 50.215 By MS/MS By matching 1 1 20576000 13685000 6890400 7529 706 8414 19061;19062 17338 17338 1250;1251 1 YRQRSPSPAPAPAPAAAAGPPTR ILTQRRERYRQRSPSP AAAGPPTRKKSRRERK R Y R T R K 7 3 0 0 0 1 0 1 0 0 0 0 0 0 7 2 1 0 1 0 0 0 23 2 2286.1981 Q9H7N4 Q9H7N4 494 516 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 4 0.00011949 69.088 By MS/MS By MS/MS 1 1 12752000 8388000 4363800 7530 2675 8415 19063;19064 17339;17340 17339 5460;5461;7894 2 YRSDIHTEAVQAALAK SGGARDERYRSDIHTE AVQAALAKHKEQKMAL R Y R A K H 4 1 0 1 0 1 1 0 1 1 1 1 0 0 0 1 1 0 1 1 0 0 16 1 1771.9217 Q9P265 Q9P265 98 113 DIP2B Disco-interacting protein 2 homolog B yes yes 3 7.3474E-05 101.2 By MS/MS By MS/MS 1 1 20580000 7438200 13142000 7531 2783 8416 19065;19066 17341;17342 17341 5714;7923 2 YRSPEPDPYLSYR ________________ PDPYLSYRWKRRRSYS R Y R Y R W 0 2 0 1 0 0 1 0 0 0 1 0 0 0 3 2 0 0 3 0 0 0 13 1 1641.7787 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761 H3BRT8 7 19 CLK3 Dual specificity protein kinase CLK3 yes no 2;3 0.002916 86.497 By MS/MS By MS/MS 2 2 38933000 19232000 19701000 7532 1129 8417 19067;19068;19069;19070 17343;17344;17345;17346 17346 2062 4 YRSPYSGPK RDRRFRGRYRSPYSGP RSPYSGPKFNSAIRGK R Y R P K F 0 1 0 0 0 0 0 1 0 0 0 1 0 0 2 2 0 0 2 0 0 0 9 1 1053.5243 G3XAC6;Q14498;Q5QP22;Q5QP23 G3XAC6 95 103 RBM39 RNA-binding protein 39 yes no 2;3 0.0018075 142.76 By MS/MS By MS/MS 2 2 281230000 140380000 140850000 7533 984 8418 19071;19072;19073;19074 17347;17348;17349;17350;17351;17352;17353 17352 1793 7 YRSPYSGPKFNSAIR RDRRFRGRYRSPYSGP PKFNSAIRGKIGLPHS R Y R I R G 1 2 1 0 0 0 0 1 0 1 0 1 0 1 2 3 0 0 2 0 0 0 15 2 1741.89 G3XAC6;Q14498;Q5QP22;Q5QP23 G3XAC6 95 109 RBM39 RNA-binding protein 39 yes no 3 0.00025496 92.897 By MS/MS By MS/MS 1 1 47638000 24619000 23018000 7534 984 8419 19075;19076 17354;17355 17355 1793 2 YRSQSGEDESMNQPGPIK DISIIKGRYRSQSGED MNQPGPIKTRLAISQS R Y R I K T 0 1 1 1 0 2 2 2 0 1 0 1 1 0 2 3 0 0 1 0 0 0 18 1 2021.9113 A0A0C4DG33;O43933 A0A0C4DG33 1150 1167 PEX1 Peroxisome biogenesis factor 1 yes no 3 0.0027373 61.692 By MS/MS By matching 1 1 3762300 1964700 1797700 7535 279 8420 19077;19078 17356 17356 498;499 1 YRSQSGEDESMNQPGPIKTR DISIIKGRYRSQSGED QPGPIKTRLAISQSHL R Y R T R L 0 2 1 1 0 2 2 2 0 1 0 1 1 0 2 3 1 0 1 0 0 0 20 2 2279.0601 A0A0C4DG33;O43933 A0A0C4DG33 1150 1169 PEX1 Peroxisome biogenesis factor 1 yes no 3 0.0034965 60.8 By MS/MS By matching 1 1 9319300 5577400 3741900 7536 279 8421 19079;19080 17357 17357 498;499 1 YSDEQLNSGRQSPSQNER TPINYSLKYSDEQLNS QSPSQNERWARPKHII K Y S E R W 0 2 2 1 0 3 2 1 0 0 1 0 0 0 1 4 0 0 1 0 0 0 18 1 2093.9362 P25054;B7Z2B6;E9PFT7 P25054 1031 1048 APC Adenomatous polyposis coli protein yes no 3 0.024282 44.312 By MS/MS By matching 1 1 13782000 8316500 5465400 7537 1628 8422 19081;19082 17358 17358 1 YSDGSIALDIFGPQK TPRKKEARYSDGSIAL LDIFGPQKMDPIYHTR R Y S Q K M 1 0 0 2 0 1 0 2 0 2 1 1 0 1 1 2 0 0 1 0 0 0 15 0 1609.7988 Q12923 Q12923 344 358 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 8.2603E-36 171.11 By MS/MS By MS/MS 1 1 32974000 16004000 16969000 7538 1885 8423 19083;19084 17359;17360 17359 3590 2 YSEEGLSPSK ESPAAGPRYSEEGLSP EEGLSPSKRRRLSMRN R Y S S K R 0 0 0 0 0 0 2 1 0 0 1 1 0 0 1 3 0 0 1 0 0 0 10 0 1095.5084 J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3KPG5 1747 1756 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 2.7317E-05 134.38 By MS/MS By MS/MS 1 1 13143000 6609800 6533700 7539 917 8424 19085;19086 17361;17362 17362 1651 2 YSEEGLSPSKR ESPAAGPRYSEEGLSP EGLSPSKRRRLSMRNH R Y S K R R 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 3 0 0 1 0 0 0 11 1 1251.6095 J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3KPG5 1747 1757 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 0.0080074 82.705 By MS/MS 1 14012000 14012000 0 7540 917 8425 19087 17363 17363 1651 1 YSENKLKSIK MKEKRQAKYSENKLKS ENKLKSIKARNEYLLT K Y S I K A 0 0 1 0 0 0 1 0 0 1 1 3 0 0 0 2 0 0 1 0 0 0 10 2 1208.6765 G5EA48;Q7Z6B7 G5EA48 189 198 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 yes no 2 0.030834 45.972 By MS/MS 1 0 0 0 7541 1001 8426 19088 17364 17364 7432 1 YSFYSTCSGQK GQKTTQNRYSFYSTCS YSTCSGQKAIKKCPVR R Y S Q K A 0 0 0 0 1 1 0 1 0 0 0 1 0 1 0 3 1 0 2 0 0 0 11 0 1326.5551 Q13835 Q13835 184 194 PKP1 Plakophilin-1 yes yes 2 0.021942 46.457 By MS/MS 1 0 0 0 7542 1932 8427 19089 17365 17365 7694 1 YSHSGSSSPDTK VESRLLPRYSHSGSSS GSSSPDTKVKPETPPR R Y S T K V 0 0 0 1 0 0 0 1 1 0 0 1 0 0 1 5 1 0 1 0 0 0 12 0 1251.5368 Q9UQ35;I3L182;I3L4D8 Q9UQ35 967 978 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 6.9395E-09 140.45 By MS/MS By MS/MS 1 1 8826400 4528400 4298000 7543 2877 8428 19090;19091 17366;17367 17367 6005;6006 2 YSHVSQHSPSKK PSVVGLARYSHVSQHS SQHSPSKKALYNKHLP R Y S K K A 0 0 0 0 0 1 0 0 2 0 0 2 0 0 1 4 0 0 1 1 0 0 12 1 1383.6895 Q14690 Q14690 1353 1364 PDCD11 Protein RRP5 homolog yes yes 3 0.00038749 97.2 By MS/MS By MS/MS 1 1 14061000 2939800 11122000 7544 1956 8429 19092;19093 17368;17369 17369 3800;3801 2 YSLQSANASSLSSGQLKSPSLSQSQASR QRSQAPARYSLQSANA LSQSQASRVLGQSSSK R Y S S R V 3 1 1 0 0 4 0 1 0 0 4 1 0 0 1 11 0 0 1 0 0 0 28 1 2868.4213 Q9H2P0 Q9H2P0 392 419 ADNP Activity-dependent neuroprotector homeobox protein yes yes 3 2.0377E-22 104.7 By MS/MS By MS/MS 1 1 68528000 29093000 39435000 7545 2647 8430 19094;19095 17370;17371 17370 5395;5396 2 YSLSPSK HSTPSPTRYSLSPSKS RYSLSPSKSYKYSPKT R Y S S K S 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 3 0 0 1 0 0 0 7 0 780.40177 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;P0DJD0;P0DJD1;J3KQ37;Q99666;O14715;F8W705 P49792 785 791 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD8;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 no no 2 0.0070678 104.01 By MS/MS By MS/MS 1 1 11947000 5245400 6701100 7546 1730;1345 8431 19096;19097 17372;17373 17373 2452 2 YSMDNTPHTPTPFK AFVTPDQKYSMDNTPH PHTPTPFKNALEKYGP K Y S F K N 0 0 1 1 0 0 0 0 1 0 0 1 1 1 3 1 3 0 1 0 0 0 14 0 1634.7399 P10244 P10244 510 523 MYBL2 Myb-related protein B yes yes 2 0.0055382 87.566 By MS/MS By MS/MS 1 1 4924800 3174200 1750600 7547 1554 8432 19098;19099 17374;17375 17375 6664 2 YSNLVQSVLSSR YEEVDQEKYSNLVQSV VQSVLSSRGVAQTPGS K Y S S R G 0 1 1 0 0 1 0 0 0 0 2 0 0 0 0 4 0 0 1 2 0 0 12 0 1351.7096 Q5QPE8;Q9BQP7;Q5QPE7 Q5QPE8 52 63 MGME1 Mitochondrial genome maintenance exonuclease 1 yes no 2 0.016833 51.073 By MS/MS 2 0 0 0 7548 2083 8433 19100;19101 17376;17377 17377 4104;4105;4106 2 YSPPAISPLVSEK PVAYVETKYSPPAISP ISPLVSEKQVEVKEGL K Y S E K Q 1 0 0 0 0 0 1 0 0 1 1 1 0 0 3 3 0 0 1 1 0 0 13 0 1386.7395 Q14694 Q14694 364 376 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 2 0.0062378 69.261 By MS/MS 1 4524300 0 4524300 7549 1957 8434 19102 17378 17378 3804 1 YSPSQNSPIHHIPSR SVGNGSSRYSPSQNSP PIHHIPSRRSPAKTIA R Y S S R R 0 1 1 0 0 1 0 0 2 2 0 0 0 0 3 4 0 0 1 0 0 0 15 0 1718.8489 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00 Q9NYF8 284 298 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.00088454 69.111 By MS/MS By MS/MS 3 4 116100000 60286000 55814000 7550 2759 8435;8436 19103;19104;19105;19106;19107;19108;19109 17379;17380;17381;17382;17383;17384 17384 5661;5662;5663;7916 6 YSPSQNSPIHHIPSRR SVGNGSSRYSPSQNSP IHHIPSRRSPAKTIAP R Y S R R S 0 2 1 0 0 1 0 0 2 2 0 0 0 0 3 4 0 0 1 0 0 0 16 1 1874.95 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00 Q9NYF8 284 299 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0061081 51.524 By MS/MS By MS/MS 1 1 48679000 24055000 24625000 7551 2759 8437 19110;19111 17385;17386 17386 5661;5662;5663;7916 2 YSPTSPTYSPTSPK VYTPTSPKYSPTSPTY TYSPTSPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 4 3 0 2 0 0 0 14 0 1511.7144 P24928 P24928 1909 1922 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 2 0.00035825 106.6 By MS/MS By MS/MS 3 3 76618000 39511000 37108000 7552 1627 8438;8439 19112;19113;19114;19115;19116;19117 17387;17388;17389;17390;17391;17392 17392 3007;3008;3009;7581 4 YSPTSPTYSPTSPVYTPTSPK TYSPTTPKYSPTSPTY VYTPTSPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 6 5 5 0 3 1 0 0 21 0 2257.079 P24928 P24928 1888 1908 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.013566 47.666 By matching By MS/MS 1 1 7068800 4175900 2892900 7553 1627 8440 19118;19119 17393 17393 7582 1 YSPTSPTYSPTTPK KYSPTSPKYSPTSPTY TYSPTTPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 3 4 0 2 0 0 0 14 0 1525.73 P24928 P24928 1874 1887 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 3.781E-12 132.23 By MS/MS 1 23060000 23060000 0 7554 1627 8441 19120 17394 17394 3010 1 YSQILSHFEK CGEEAMKKYSQILSHF QILSHFEKLEPQAAVV K Y S E K L 0 0 0 0 0 1 1 0 1 1 1 1 0 1 0 2 0 0 1 0 0 0 10 0 1250.6295 Q9NYY1 Q9NYY1 142 151 IL20 Interleukin-20 yes yes 2 0.0039877 101.35 By MS/MS 1 17824000 0 17824000 7555 2761 8442 19121 17395 17395 5666 1 YSQNIYIQNR LEAELPEKYSQNIYIQ QNIYIQNRNIQTDNNK K Y S N R N 0 1 2 0 0 2 0 0 0 2 0 0 0 0 0 1 0 0 2 0 0 0 10 0 1297.6415 Q99959 Q99959 626 635 PKP2 Plakophilin-2 yes yes 2 0.00031198 109.48 By MS/MS 1 4484800 4484800 0 7556 2563 8443 19122 17396 17396 7866 1 YSQVLANGLDNK QKDVKDGKYSQVLANG LANGLDNKLREDLERL K Y S N K L 1 0 2 1 0 1 0 1 0 0 2 1 0 0 0 1 0 0 1 1 0 0 12 0 1320.6674 P62269;J3JS69 P62269 95 106 RPS18 40S ribosomal protein S18 yes no 2 0.00054074 110.39 By MS/MS 1 1222100 0 1222100 7557 1795 8444 19123 17397 17397 1 YSSGGNFETPSK VDDFRQPRYSSGGNFE GNFETPSKRAPAKGRA R Y S S K R 0 0 1 0 0 0 1 2 0 0 0 1 0 1 1 3 1 0 1 0 0 0 12 0 1272.5622 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 368 379 OCLN Occludin yes no 2 1.7202E-10 147.28 By MS/MS By MS/MS 1 1 18536000 9656800 8879500 7558 324 8445 19124;19125 17398;17399 17398 7241 2 YSSGGNFETPSKR VDDFRQPRYSSGGNFE NFETPSKRAPAKGRAG R Y S K R A 0 1 1 0 0 0 1 2 0 0 0 1 0 1 1 3 1 0 1 0 0 0 13 1 1428.6634 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 368 380 OCLN Occludin yes no 3 0.0005827 84.365 By matching By MS/MS 1 1 4107800 1839500 2268300 7559 324 8446 19126;19127 17400 17400 7241 1 YSSLNLFDTYK AKGKDGKKYSSLNLFD LNLFDTYKGKSLEIQK K Y S Y K G 0 0 1 1 0 0 0 0 0 0 2 1 0 1 0 2 1 0 2 0 0 0 11 0 1349.6503 P48634 P48634 17 27 PRRC2A Protein PRRC2A yes yes 2 0.000167 110.53 By MS/MS By MS/MS 1 1 2046600 1334500 712120 7560 1718 8447 19128;19129 17401;17402 17401 7626 2 YSTLHTQSAEPPPPPEPAR VCEEPQVKYSTLHTQS PPPPEPARI_______ K Y S A R I 2 1 0 0 0 1 2 0 1 0 1 0 0 0 6 2 2 0 1 0 0 0 19 0 2074.012 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 176 CD99L2 CD99 antigen-like protein 2 yes no 3 0.00096521 72.207 By MS/MS By MS/MS 1 1 7229500 4116200 3113300 7561 342 8448 19130;19131 17403;17404;17405;17406 17405 6309;7245 4 YSTLHTQSAEPPPPPEPARI VCEEPQVKYSTLHTQS PPPEPARI________ K Y S R I - 2 1 0 0 0 1 2 0 1 1 1 0 0 0 6 2 2 0 1 0 0 0 20 1 2187.096 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 177 CD99L2 CD99 antigen-like protein 2 yes no 3 4.1524E-09 95.365 By MS/MS By MS/MS 1 1 54790000 29145000 25645000 7562 342 8449 19132;19133 17407;17408;17409;17410 17410 6309;7245 4 YSVGSLSPVSASVLK TPKKKRIKYSVGSLSP PVSASVLKKTEQKEKV K Y S L K K 1 0 0 0 0 0 0 1 0 0 2 1 0 0 1 5 0 0 1 3 0 0 15 0 1492.8137 Q9UBU7 Q9UBU7 353 367 DBF4 Protein DBF4 homolog A yes yes 2 0.00037057 102.72 By MS/MS By MS/MS 1 1 11122000 5834400 5287800 7563 2803 8450 19134;19135 17411;17412 17411 5745 2 YSVSSPNSLGVVPYLGGEQSYYR ________________ GGEQSYYRAAAAAAGG R Y S Y R A 0 1 1 0 0 1 1 3 0 0 2 0 0 0 2 5 0 0 4 3 0 0 23 0 2521.2125 Q12948 Q12948 5 27 FOXC1 Forkhead box protein C1 yes yes 2;3 5.0282E-33 132.64 By MS/MS By MS/MS 1 2 111950000 47132000 64822000 7564 1887 8451 19136;19137;19138 17413;17414;17415 17413 3601;3602 3 YSYLTEPGMSPQSPCER ASLALRKRYSYLTEPG SPQSPCERTDIRMAIV R Y S E R T 0 1 0 0 1 1 2 1 0 0 1 0 1 0 3 3 1 0 2 0 0 0 17 0 2000.8608 H0YA66;H0Y3A4 H0YA66 20 36 ANK3 yes no 2 0.018453 51.774 By matching By MS/MS 2 2 17808000 10016000 7792800 7565 1013 8452;8453 19139;19140;19141;19142 17416;17417 17416 1870;1871 2 YTAGSASPTPTFK QTDIKLSRYTAGSASP ASPTPTFKTRKHRDFR R Y T F K T 2 0 0 0 0 0 0 1 0 0 0 1 0 1 2 2 3 0 1 0 0 0 13 0 1326.6456 Q2LD37;H7C0G8;H7C070 Q2LD37 2597 2609 KIAA1109 Uncharacterized protein KIAA1109 yes no 2 0.0050945 72.815 By matching By MS/MS 1 1 3595800 1723100 1872800 7566 2028 8454 19143;19144 17418 17418 3963 1 YTCLASSPAGDDDK AQVEDTGRYTCLASSP SPAGDDDKEYLVRVHV R Y T D K E 2 0 0 3 1 0 0 1 0 0 1 1 0 0 1 2 1 0 1 0 0 0 14 0 1498.6246 Q96RW7 Q96RW7 3597 3610 HMCN1 Hemicentin-1 yes yes 3 0.025842 42.797 By matching By MS/MS 1 1 39877000 16258000 23619000 7567 2537 8455 19145;19146 17419 17419 7859 1 YTEFYHVPTHSDASK PRKHIVERYTEFYHVP PTHSDASKKRLIEDTE R Y T S K K 1 0 0 1 0 0 1 0 2 0 0 1 0 1 1 2 2 0 2 1 0 0 15 0 1780.8057 Q96HC4;H0YBI4 Q96HC4 247 261 PDLIM5 PDZ and LIM domain protein 5 yes no 3 0.0058552 56.46 By MS/MS By MS/MS 1 1 38185000 21512000 16673000 7568 2500 8456 19147;19148 17420;17421 17421 7842 2 YTWHITNILQVK LPLGTFSKYTWHITNI ITNILQVKQILDTPEM K Y T V K Q 0 0 1 0 0 1 0 0 1 2 1 1 0 0 0 0 2 1 1 1 0 0 12 0 1514.8245 Q9NWW7 Q9NWW7 433 444 C2orf42 Uncharacterized protein C2orf42 yes yes 2 0.015653 56.432 By MS/MS 1 2348100 2348100 0 7569 2747 8457 19149 17422 17422 7912 1 YVASVLGLTPSPR RSKADVERYVASVLGL LGLTPSPRQKSMKGFY R Y V P R Q 1 1 0 0 0 0 0 1 0 0 2 0 0 0 2 2 1 0 1 2 0 0 13 0 1358.7558 Q99666;O14715;F8W705;C9J1W9;C9JF75 Q99666 11 23 RGPD5;RGPD8;RGPD6 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 2 5.3589E-11 145 By MS/MS By MS/MS 1 1 3443600 2313700 1129900 7570 1345 8458 19150;19151 17423;17424 17424 2453 2 YVDEENSDGETSNHR VILEKAGKYVDEENSD DGETSNHRLQETSSQS K Y V H R L 0 1 2 2 0 0 3 1 1 0 0 0 0 0 0 2 1 0 1 1 0 0 15 0 1750.703 H0YFD2;F8WFC1;Q8N9T8;H0YH26 H0YFD2 74 88 KRI1 Protein KRI1 homolog yes no 2 0.00032656 94.532 By matching By MS/MS 1 2 11342000 2371300 8970900 7571 955 8459 19152;19153;19154 17425;17426 17426 1730 2 YVDIAIPCNNK CNTDSPLRYVDIAIPC IAIPCNNKGAHSVGLM R Y V N K G 1 0 2 1 1 0 0 0 0 2 0 1 0 0 1 0 0 0 1 1 0 0 11 0 1305.6387 C9J9K3;A0A0C4DG17;P08865 C9J9K3 156 166 RPSA 40S ribosomal protein SA yes no 2 0.022452 79.474 By MS/MS By MS/MS 1 1 1149100 1149100 0 7572 274 8460 19155;19156 17427;17428 17428 2 YVDSEGHLYTVPIR ________________ HLYTVPIREQGNIYKP K Y V I R E 0 1 0 1 0 0 1 1 1 1 1 0 0 0 1 1 1 0 2 2 0 0 14 0 1647.8257 Q03135 Q03135 6 19 CAV1 Caveolin-1 yes yes 2;3 0.00046611 101.93 By MS/MS By MS/MS 1 2 16533000 5763400 10769000 7573 1845 8461 19157;19158;19159 17429;17430;17431;17432 17431 6767;7665 4 YVGFGNTPPPQKK YQGAQGNRYVGFGNTP NTPPPQKKEDDFLNNA R Y V K K E 0 0 1 0 0 1 0 2 0 0 0 2 0 1 3 0 1 0 1 1 0 0 13 1 1431.751 E5RHT6;E5RHC5;F8W1U7;F8VWH9;Q8N6T3 E5RHT6 109 121 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes no 2 0.010191 91.712 By MS/MS By MS/MS 1 1 6146700 3346600 2800100 7574 697 8462 19160;19161 17433;17434 17434 6408 2 YVISDEEEEDDD KANKKHKKYVISDEEE DEEEEDDD________ K Y V D D - 0 0 0 4 0 0 4 0 0 1 0 0 0 0 0 1 0 0 1 1 0 0 12 0 1456.5365 Q8WVC0 Q8WVC0 655 666 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 0.00029268 110.54 By MS/MS By MS/MS 1 1 81091000 43541000 37551000 7575 2403 8463 19162;19163 17435;17436 17436 4808 2 YVLGQLVGLNSPNSILK KGTTEEMKYVLGQLVG NSPNSILKAAKTLYEH K Y V L K A 0 0 2 0 0 1 0 2 0 1 4 1 0 0 1 2 0 0 1 2 0 0 17 0 1814.0302 P33981 P33981 811 827 TTK Dual specificity protein kinase TTK yes yes 2 8.9547E-11 124.04 By MS/MS By MS/MS 1 1 20679000 16902000 3776200 7576 1667 8464 19164;19165 17437;17438 17437 3068 2 YVNLMEQR EALSNPIRYVNLMEQR YVNLMEQRAKQLAALT R Y V Q R A 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 1 1 0 0 8 0 1051.5121 Q8IV92;H0YCJ2;A0A0D9SF51;A0A0D9SG17;A0A1B0GWB6;A0A087WW73;A0A087WT80;Q9NQ66 Q8IV92 135 142 PLCB1 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes no 2 0.0055776 89.698 By MS/MS By MS/MS 1 1 5505600 2799900 2705800 7577 22 8465 19166;19167 17439;17440 17440 7155 2 YVPLADVK FSSKYVPKYVPLADVK YVPLADVKSEKTKKGR K Y V V K S 1 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 2 0 0 8 0 903.50657 G5E972;P42167;H0YJH7 G5E972 354 361 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2 0.0055643 89.752 By MS/MS By MS/MS 1 1 8908300 5300700 3607600 7578 990 8466 19168;19169 17441;17442;17443 17441 7429 3 YVPPHLSPDKK RTERKIPKYVPPHLSP PHLSPDKKWLGTPIEE K Y V K K W 0 0 0 1 0 0 0 0 1 0 1 2 0 0 3 1 0 0 1 1 0 0 11 1 1279.6925 Q86W56 Q86W56 442 452 PARG Poly(ADP-ribose) glycohydrolase yes yes 3 0.020698 46.159 By MS/MS By MS/MS 1 2 6019400 2219700 3799700 7579 2246 8467 19170;19171;19172 17444;17445 17444 4494 2 YVSGSSPDLVTR DLASHRHKYVSGSSPD SSPDLVTRKVQLSVKT K Y V T R K 0 1 0 1 0 0 0 1 0 0 1 0 0 0 1 3 1 0 1 2 0 0 12 0 1279.6408 Q15678 Q15678 589 600 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 0.001431 96.371 By MS/MS By MS/MS 1 1 23269000 14111000 9158100 7580 2001 8468 19173;19174 17446;17447 17446 3907 2 YVTRYIYNREEYAR TNGTERVRYVTRYIYN YNREEYARFDSDVEVY R Y V A R F 1 3 1 0 0 0 2 0 0 1 0 0 0 0 0 0 1 0 4 1 0 0 14 2 1894.9326 A0A140TA15;A0A140T9R6;A0A140T8Z5;P01920 A0A140TA15 58 71 HLA-DQB1 HLA class II histocompatibility antigen, DQ beta 1 chain yes no 2 0.029812 42.395 By MS/MS 1 0 0 0 7581 357 8469 19175 17448 17448 7248;7249 1 YYEGYYAAGPGYGGR GYAPNQGRYYEGYYAA AGPGYGGRNDSDPTYG R Y Y G R N 2 1 0 0 0 0 1 5 0 0 0 0 0 0 1 0 0 0 5 0 0 0 15 0 1642.7052 A0A087WZF1;Q93052;C9JXK9;C9JUT4 A0A087WZF1 274 288 LPP Lipoma-preferred partner yes no 2 0.0002339 90.827 By MS/MS By MS/MS 1 1 3599900 2178600 1421400 7582 110 8470 19176;19177 17449;17450 17450 7170 2 YYLAPKIEDEEGS IADMGHLKYYLAPKIE KIEDEEGS________ K Y Y G S - 1 0 0 1 0 0 3 1 0 1 1 1 0 0 1 1 0 0 2 0 0 0 13 1 1512.6984 P12004 P12004 249 261 PCNA Proliferating cell nuclear antigen yes yes 2 0.00032225 120.27 By MS/MS By MS/MS 2 2 24190000 13814000 10375000 7583 1568 8471;8472 19178;19179;19180;19181 17451;17452;17453 17452 2884 3 YYSDSDDELTVEQR HKPYLYSKYYSDSDDE DELTVEQRRQSIAKEK K Y Y Q R R 0 1 0 3 0 1 2 0 0 0 1 0 0 0 0 2 1 0 2 1 0 0 14 0 1718.7271 Q8NFC6 Q8NFC6 480 493 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 2.4324E-12 134.37 By MS/MS By MS/MS 3 3 38539000 22852000 15687000 7584 2353 8473;8474 19182;19183;19184;19185;19186;19187 17454;17455;17456;17457;17458;17459;17460;17461 17455 4719;4720 8 YYSIDDNQNK IRRTELKRYYSIDDNQ SIDDNQNKTHDKKEKK R Y Y N K T 0 0 2 2 0 1 0 0 0 1 0 1 0 0 0 1 0 0 2 0 0 0 10 0 1258.5466 Q8NI08;Q5TF97;Q5TF96 Q8NI08 87 96 NCOA7 Nuclear receptor coactivator 7 yes no 2 0.022053 62.799 By MS/MS By matching 1 1 9113600 5654500 3459200 7585 2364 8475 19188;19189 17462 17462 1 YYVTIIDAPGHR LWKFETSKYYVTIIDA IIDAPGHRDFIKNMIT K Y Y H R D 1 1 0 1 0 0 0 1 1 2 0 0 0 0 1 0 1 0 2 1 0 0 12 0 1403.7197 P68104;A0A087WVQ9;Q5VTE0;A0A087WV01;A6PW80;Q5JR01 P68104 85 96 EEF1A1;EEF1A1P5 Elongation factor 1-alpha 1;Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha yes no 2;3 0.00093083 98.156 By MS/MS By MS/MS 2 2 8074700 3366300 4708400 7586 1809 8476 19190;19191;19192;19193 17463;17464;17465 17463 3