Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Identification type 5ug_R1 Identification type 5ug_R2 Experiment 5ug_R1 Experiment 5ug_R2 Intensity Intensity 5ug_R1 Intensity 5ug_R2 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Deamidation (NQ) site IDs Oxidation (M) site IDs Phospho (STY) site IDs MS/MS Count AAAAAATAPPSPGPAQPGPR AAPARAPRAAAAAATA GPAQPGPRAQRAAPLA R A A P R A 8 1 0 0 0 1 0 2 0 0 0 0 0 0 6 1 1 0 0 0 0 0 20 0 1754.9064 Q6SPF0 Q6SPF0 151 170 SAMD1 Atherin yes yes 2;3 3.0263E-06 83.252 By MS/MS By MS/MS 2 2 14145000 6877600 7267300 0 1202 0 0;1;2;3 0;1;2;3;4 0 1408 5 AAAAAWEEPSSGNGTAR ________________ SSGNGTARAGPRKRGG K A A A R A 6 1 1 0 0 0 2 2 0 0 0 0 0 0 1 2 1 1 0 0 0 0 17 0 1644.7492 Q9P258 Q9P258 6 22 RCC2 Protein RCC2 yes yes 2 0.0079033 63.894 By matching By MS/MS 1 1 1779800 946120 833680 1 1447 1 4;5 5 5 1754 1 AAATPESQEPQAK EGTAQEGKAAATPESQ ESQEPQAKGAEASAAS K A A A K G 4 0 0 0 0 2 2 0 0 0 0 1 0 0 2 1 1 0 0 0 0 0 13 0 1326.6416 P49006 P49006 145 157 MARCKSL1 MARCKS-related protein yes yes 2 7.2585E-09 108.23 By MS/MS By MS/MS 2 1 6995200 4775700 2219500 2 974 2 6;7;8 6;7;8;9 7 2129 4 AAAYDISEDEED PANLSRHKAAAYDISE DISEDEED________ K A A E D - 3 0 0 3 0 0 3 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 12 0 1326.5099 P49585 P49585 356 367 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 2 0.0066763 60.641 By MS/MS By matching 1 1 7179500 3189000 3990500 3 977 3 9;10 10 10 1117 1 AADISLDNLVEGK EAVTPLTKAADISLDN LDNLVEGKRKRRSNVS K A A G K R 2 0 1 2 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 1 0 0 13 0 1343.6933 Q12888;A6NNK5;H7BZY0 Q12888 1614 1626 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0175 48.351 By matching By MS/MS 1 1 737590 322920 414680 4 1069 4 11;12 11 11 1 AADRLPNLSSPSAEGPPGPPSGPAPR KFLEERAKAADRLPNL PPSGPAPRKKTQEKDD K A A P R K 4 2 1 1 0 0 1 3 0 0 2 0 0 0 8 4 0 0 0 0 0 0 26 1 2494.2564 O60784 O60784 453 478 TOM1 Target of Myb protein 1 yes yes 3 9.4945E-05 68.916 By matching By MS/MS 1 1 6116000 3444500 2671500 5 792 5 13;14 12 12 928 1 AADSDDGAVSAPAASDGGVSK ________________ ASDGGVSKSTTSGEEL M A A S K S 6 0 0 4 0 0 0 3 0 0 0 1 0 0 1 4 0 0 0 2 0 0 21 0 1846.8181 Q96GM8 Q96GM8 2 22 TOE1 Target of EGR1 protein 1 yes yes 2 3.3527E-17 97.621 By MS/MS By MS/MS 1 1 10197000 5605100 4591900 6 1331 6 15;16 13;14 14 1570 2 AAEAGGAEEQYGFLTTPTK YVMAVVDKAAEAGGAE GFLTTPTKQLGAQSPG K A A T K Q 4 0 0 0 0 1 3 3 0 0 1 1 0 1 1 0 3 0 1 0 0 0 19 0 1939.9163 P46821 P46821 1052 1070 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0049706 58.071 By MS/MS 1 5227800 5227800 0 7 968 7 17 15 15 2415 1 AAEDDEDDDVDTK AESATGKRAAEDDEDD EDDDVDTKKQKTDEDD R A A T K K 2 0 0 6 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 13 0 1436.5427 B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1;P06454 B8ZZQ6 87 99 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 2 3.0104E-06 103.08 By MS/MS By MS/MS 1 1 3075800 2074100 1001700 8 298 8 18;19 16;17 16 2 AAEDDEDDDVDTKK AESATGKRAAEDDEDD DDDVDTKKQKTDEDD_ R A A K K Q 2 0 0 6 0 0 2 0 0 0 0 2 0 0 0 0 1 0 0 1 0 0 14 1 1564.6377 B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1;P06454 B8ZZQ6 87 100 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 3 0.00068436 69.314 By MS/MS 1 835770 0 835770 9 298 9 20 18 18 1 AAESETPGKSPEK LPASETPKAAESETPG TPGKSPEKKPKIKEEA K A A E K K 2 0 0 0 0 0 3 1 0 0 0 2 0 0 2 2 1 0 0 0 0 0 13 1 1329.6412 O76021;J3QSV6 O76021 418 430 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.0033985 73.386 By MS/MS By matching 1 1 4197600 2098500 2099100 10 804 10 21;22 19 19 946 1 AAGGAPSPPPPVR GLKSRGSRAAGGAPSP PSPPPPVRRASAGPAP R A A V R R 3 1 0 0 0 0 0 2 0 0 0 0 0 0 5 1 0 0 0 1 0 0 13 0 1172.6302 Q4KMP7 Q4KMP7 672 684 TBC1D10B TBC1 domain family member 10B yes yes 2 0.002958 69.352 By MS/MS By MS/MS 1 1 2977200 1536900 1440300 11 1146 11 23;24 20;21;22;23 21 1332 4 AAGLESAATIRTK SGSLIRKKAAGLESAA SAATIRTKVFVWGLND K A A T K V 4 1 0 0 0 0 1 1 0 1 1 1 0 0 0 1 2 0 0 0 0 0 13 1 1287.7147 A0A0J9YVP0;O95714 A0A0J9YVP0 195 207 HERC2 E3 ubiquitin-protein ligase HERC2 yes no 3 0.012843 48.044 By MS/MS By matching 1 1 1906400 571020 1335400 12 184 12 25;26 24 24 0 AAHTEDINACTLTTSPR ASEPSLHRAAHTEDIN CTLTTSPRLPVF____ R A A P R L 3 1 1 1 1 0 1 0 1 1 1 0 0 0 1 1 4 0 0 0 0 0 17 0 1856.8687 H7C155;P04049 H7C155 507 523 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 3 0.0083802 72.446 By MS/MS By MS/MS 1 1 5370400 2742000 2628500 13 675 13 27;28 25;26 25 797;2052;2053 2 AAKLSEGSQPAEEEEDQETPSR SSRVRQARAAKLSEGS EDQETPSRNLRVRADR R A A S R N 3 1 0 1 0 2 6 1 0 0 1 1 0 0 2 3 1 0 0 0 0 0 22 1 2387.0725 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 178 199 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.0018639 69.259 By MS/MS By MS/MS 2 2 14752000 8811400 5940400 14 412 14;15 29;30;31;32 27;28;29;30;31 29 464;465 5 AALAPAKESPR SGKTHQIRAALAPAKE APAKESPRKGAAPTPP R A A P R K 4 1 0 0 0 0 1 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 11 1 1109.6193 J3KQ96;E7ETY2;Q13428;H0YAB7 J3KQ96 898 908 TCOF1 Treacle protein yes no 2;3 4.1461E-06 106.29 By MS/MS By MS/MS 2 2 59897000 34071000 25825000 15 422 16 33;34;35;36 32;33;34;35;36;37 35 479 6 AALEYLGSFDHYAT DQYQLCYRAALEYLGS GSFDHYAT________ R A A A T - 3 0 0 1 0 0 1 1 1 0 2 0 0 1 0 1 1 0 2 0 0 0 14 0 1556.7147 H0Y380;H0Y4H1;H0Y7Z9;H0Y6Z7;P10586;Q3KPI9;F5GWR7;P23468 H0Y380 966 979 PTPRF;PTPRD Receptor-type tyrosine-protein phosphatase F;Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta yes no 2 0.0071831 76.465 By MS/MS By MS/MS 1 1 9988400 5711000 4277300 16 580 17 37;38 38;39 39 2034 2 AALLKASPK NEVKKLQKAALLKASP ALLKASPKKAPGTKGT K A A P K K 3 0 0 0 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 9 1 897.56475 P50914 P50914 133 141 RPL14 60S ribosomal protein L14 yes yes 2 0.00052472 100.09 By MS/MS By MS/MS 1 1 32983000 19550000 13433000 17 990 18 39;40 40;41 40 1136 2 AALVIQQSGFSVFVVGVADVDYNELANIASKPSER RSQDEVKKAALVIQQS IASKPSERHVFIVDDF K A A E R H 5 1 2 2 0 2 2 2 0 2 2 1 0 2 1 4 0 0 1 6 0 0 35 1 3692.905 D6RGG3;Q99715;H0Y5N9 D6RGG3 2444 2478 COL12A1 Collagen alpha-1(XII) chain yes no 3 0.014823 35.132 By matching By MS/MS 1 1 52551000 37735000 14816000 18 379 19 41;42 42 42 1 AAPQSPSVPK QELVNQSKAAPQSPSV PQSPSVPKKPGPPVLS K A A P K K 2 0 0 0 0 1 0 0 0 0 0 1 0 0 3 2 0 0 0 1 0 0 10 0 980.5291 E9PF10;O75694 E9PF10 924 933 NUP155 Nuclear pore complex protein Nup155 yes no 2 1.107E-05 102.53 By MS/MS By MS/MS 1 1 7624200 3806000 3818200 19 440 20 43;44 43;44 44 517;518 2 AAPREEPLTPR GRPPAPPRAAPREEPL REEPLTPRLKPEGAPE R A A P R L 2 2 0 0 0 0 2 0 0 0 1 0 0 0 3 0 1 0 0 0 0 0 11 1 1235.6622 A0A0A0MTP6;O15357 A0A0A0MTP6 884 894 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 3 0.017832 53.754 By matching By MS/MS 1 1 879690 477270 402420 20 131 21 45;46 45 45 1 AASAPAKESPR SGKTSQVGAASAPAKE APAKESPRKGAAPAPP G A A P R K 4 1 0 0 0 0 1 0 0 0 0 1 0 0 2 2 0 0 0 0 0 0 11 1 1083.5673 J3KQ96;E7ETY2;Q13428 J3KQ96 373 383 TCOF1 Treacle protein yes no 2;3 9.7163E-06 109.6 By MS/MS By MS/MS 2 2 91632000 52490000 39143000 21 422 22 47;48;49;50 46;47;48;49;50 49 480 5 AASLNYLNQPSAAPLQVSR PSSSNMKRAASLNYLN AAPLQVSRGLSASTMD R A A S R G 4 1 2 0 0 2 0 0 0 0 3 0 0 0 2 3 0 0 1 1 0 0 19 0 1999.0487 Q9NSK0 Q9NSK0 588 606 KLC4 Kinesin light chain 4 yes yes 2 0.0094946 48.112 By MS/MS By matching 1 1 3170700 1618200 1552500 22 1425 23 51;52 51 51 1725 1 AASPPASASDLIEQQQK IKVIRNMRAASPPASA DLIEQQQKRGRREHKA R A A Q K R 4 0 0 1 0 3 1 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 17 0 1739.869 Q5VSL9 Q5VSL9 333 349 STRIP1 Striatin-interacting protein 1 yes yes 2 1.6042E-16 110.04 By MS/MS By MS/MS 1 1 6632500 3743400 2889100 23 1175 24 53;54 52;53 52 1383 2 AASQGSDSPLLPAQR AKGRLAERAASQGSDS SPLLPAQRNSIPVSPV R A A Q R N 3 1 0 1 0 2 0 1 0 0 2 0 0 0 2 3 0 0 0 0 0 0 15 0 1496.7583 H0Y507;Q5TCZ1 H0Y507 963 977 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.0080842 51.03 By MS/MS By matching 1 1 1758900 825690 933170 24 589 25 55;56 54 54 704 1 AASSAAQGAFQGN FSSRTFHRAASSAAQG AQGAFQGN________ R A A G N - 5 0 1 0 0 2 0 2 0 0 0 0 0 1 0 2 0 0 0 0 0 0 13 0 1178.5316 O15127 O15127 317 329 SCAMP2 Secretory carrier-associated membrane protein 2 yes yes 2 0.011442 52.071 By MS/MS By matching 1 1 1284300 552560 731700 25 770 26 57;58 55 55 898 1 AASSSSPGSPVASSPSR FEKPESPRAASSSSPG PVASSPSRLSPTPDGP R A A S R L 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 8 0 0 0 1 0 0 17 0 1530.7274 Q92538 Q92538 1776 1792 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0054498 53.169 By matching By MS/MS 1 1 1721300 725140 996170 26 1300 27 59;60 56 56 1534 1 AAVGQESPGGLEAGNAK PINKGRKRAAVGQESP GLEAGNAKAPKLQDLA R A A A K A 4 0 1 0 0 1 2 4 0 0 1 1 0 0 1 1 0 0 0 1 0 0 17 0 1554.7638 Q29RF7 Q29RF7 1299 1315 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 4.8679E-11 102.72 By MS/MS By MS/MS 1 1 10975000 6222500 4752200 27 1140 28 61;62 57;58 58 1329 2 AAVLSDSEDEEKASAK EEKVAKRKAAVLSDSE DEEKASAKKSRVVSDA K A A A K K 4 0 0 2 0 0 3 0 0 0 1 2 0 0 0 3 0 0 0 1 0 0 16 1 1648.7792 Q96ST2 Q96ST2 394 409 IWS1 Protein IWS1 homolog yes yes 2 0.00171 79.317 By MS/MS 1 2130300 0 2130300 28 1350 29 63 59 59 1599;1600 1 AAVVTSPPPTTAPHK ________________ PPTTAPHKERYFDRVD R A A H K E 3 0 0 0 0 0 0 0 1 0 0 1 0 0 4 1 3 0 0 2 0 0 15 0 1472.7987 E7EV99;E7ENY0;P35611;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 E7EV99 7 21 ADD1 Alpha-adducin yes no 2 1.1338E-05 98.253 By MS/MS By MS/MS 1 1 11100000 6668200 4431900 29 404 30 64;65 60;61;62;63 62 451;1976 4 AAVVTSPPPTTAPHKER ________________ TTAPHKERYFDRVDEN R A A E R Y 3 1 0 0 0 0 1 0 1 0 0 1 0 0 4 1 3 0 0 2 0 0 17 1 1757.9424 E7EV99;E7ENY0;P35611;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 E7EV99 7 23 ADD1 Alpha-adducin yes no 3 0.0019465 64.52 By MS/MS By MS/MS 1 1 7572000 5082200 2489900 30 404 31 66;67 64;65 64 451;1976 2 ACLDDSYASGEGLKR SGNGTLSRACLDDSYA ASGEGLKRSALSSSLR R A C K R S 2 1 0 2 1 0 1 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 15 1 1640.7464 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 891 905 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2;3 8.1985E-31 120.77 By matching By MS/MS 2 2 3680300 2182300 1498000 31 44 32 68;69;70;71 66;67 67 51;2259 0 ACNLDVILGFDGSR PGVTDAAKACNLDVIL ILGFDGSRDQNVFVAQ K A C S R D 1 1 1 2 1 0 0 2 0 1 2 0 0 1 0 1 0 0 0 1 0 0 14 0 1535.7402 E7ENL6;P12111 E7ENL6 1227 1240 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0002253 85.813 By MS/MS By MS/MS 1 1 1077100 603530 473620 32 403 33 72;73 68;69 68 2 ACPGPPPPSPEPLAR DDSSRPSRACPGPPPP PSPEPLARLALAMELS R A C A R L 2 1 0 0 1 0 1 1 0 0 1 0 0 0 7 1 0 0 0 0 0 0 15 0 1541.766 A0A087WSV0;Q9HB09 A0A087WSV0 181 195 BCL2L12 Bcl-2-like protein 12 yes no 2 0.001525 66.059 By matching By MS/MS 1 1 1525100 717860 807240 33 13 34 74;75 70 70 8 1 ADAVQDSEMVELVELEIR HVVVYVNKADAVQDSE ELVELEIRELLTEFGY K A D I R E 2 1 0 2 0 1 4 0 0 1 2 0 1 0 0 1 0 0 0 3 0 0 18 0 2044.9987 P49411 P49411 183 200 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.0021874 54.974 By MS/MS 1 342950 342950 0 34 975 35 76 71 71 171 1 ADDADEFGYSR LWRYGDFRADDADEFG ADEFGYSR________ R A D S R - 2 1 0 3 0 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 11 0 1244.4946 Q7KZF4 Q7KZF4 900 910 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 7.9773E-05 101.65 By MS/MS By MS/MS 2 1 2292400 1344500 947870 35 1214 36;37 77;78;79 72;73;74 73 1422;2471 2 ADEASELACPTPK KLQELSSKADEASELA ELACPTPKEDGLAQQQ K A D P K E 3 0 0 1 1 0 2 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 13 0 1387.6289 A0A0U1RQF0;P49327 A0A0U1RQF0 2192 2204 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 0.017229 65.565 By MS/MS By matching 1 1 3788300 1893500 1894800 36 194 38 80;81 75 75 1 ADGEYWLGLQNMHLLTLK DYKLGFGRADGEYWLG NMHLLTLKQKYELRVD R A D L K Q 1 0 1 1 0 1 1 2 1 0 5 1 1 0 0 0 1 1 1 0 0 0 18 0 2101.0666 K7ES70;P55083 K7ES70 131 148 MFAP4 Microfibril-associated glycoprotein 4 yes no 3 0.0010855 73.208 By MS/MS By MS/MS 2 2 3800400 2287100 1513300 37 739 39;40 82;83;84;85 76;77 76 112 2 ADGGAEYATYQTK QRRKKKGKADGGAEYA EYATYQTKSTTPAEQR K A D T K S 3 0 0 1 0 1 1 2 0 0 0 1 0 0 0 0 2 0 2 0 0 0 13 0 1373.6099 R4GN18 R4GN18 57 69 CD46 yes yes 2 0.0015315 86.463 By MS/MS By MS/MS 1 1 1410700 828670 582030 38 1521 41 86;87 78;79 79 2249;2518 2 ADGYEPPVQESV ETGAKVERADGYEPPV EPPVQESV________ R A D S V - 1 0 0 1 0 1 2 1 0 0 0 0 0 0 2 1 0 0 1 2 0 0 12 0 1289.5776 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 216 227 RPS3A 40S ribosomal protein S3a yes no 2 0.0069002 60.064 By MS/MS By matching 1 1 4589100 2456400 2132700 39 369 42 88;89 80 80 429 1 ADIVFLLDGSINFR PSRPEKKKADIVFLLD LDGSINFRRDSFQEVL K A D F R R 1 1 1 2 0 0 0 1 0 2 2 0 0 2 0 1 0 0 0 1 0 0 14 0 1578.8406 E7ENL6;P12111 E7ENL6 1031 1044 COL6A3 Collagen alpha-3(VI) chain yes no 2 4.7245E-05 100.55 By MS/MS By MS/MS 2 2 11752000 7620900 4131000 40 403 43 90;91;92;93 81;82;83 81 3 ADIVFLVDGSYSIGIANFVK CSRGVDIKADIVFLVD IGIANFVKVRAFLEVL K A D V K V 2 0 1 2 0 0 0 2 0 3 1 1 0 2 0 2 0 0 1 3 0 0 20 0 2127.1252 D6RGG3;Q99715 D6RGG3 439 458 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.01378 69.92 By matching By MS/MS 1 1 15615000 6570400 9044200 41 379 44 94;95 84 84 1 ADMVIEAVFEDLSLK LDYQGFEKADMVIEAV VFEDLSLKHRVLKEVE K A D L K H 2 0 0 2 0 0 2 0 0 1 2 1 1 1 0 1 0 0 0 2 0 0 15 0 1678.8488 P40939 P40939 441 455 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.010835 55.258 By MS/MS 1 0 0 0 42 957 45 96 85 85 166 1 ADSDSEDKGEESKPK KSEGGKRKADSDSEDK KGEESKPKKKKEESEK K A D P K K 1 0 0 3 0 0 3 1 0 0 0 3 0 0 1 3 0 0 0 0 0 0 15 2 1620.7115 C9JWS9;K7ELA4;B5MD17;J3KS05;P83916 C9JWS9 87 101 CBX1 Chromobox protein homolog 1 yes no 3 0.0033385 59.606 By MS/MS By matching 1 1 3090400 1449000 1641400 43 281 46 97;98 86 86 343 1 ADSPVNGLPK LEGAKKAKADSPVNGL SPVNGLPKGRESRSRS K A D P K G 1 0 1 1 0 0 0 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 10 0 996.52401 A0A0A0MSF3;Q96S94 A0A0A0MSF3 194 203 CCNL2 Cyclin-L2 yes no 2 0.0046328 67.93 By matching By MS/MS 1 1 1529800 820110 709670 44 117 47 99;100 87 87 142 1 ADVNSKKTLR VLRNLSWRADVNSKKT VNSKKTLREVGSVKAL R A D L R E 1 1 1 1 0 0 0 0 0 0 1 2 0 0 0 1 1 0 0 1 0 0 10 2 1130.6408 P25054;E9PFT7;B7Z2B6;H3BNH8;R4GMU6 P25054 555 564 APC Adenomatous polyposis coli protein yes no 2 0.01349 52.576 By matching By MS/MS 1 1 879710 458080 421630 45 929 48 101;102 88 88 1 AEADIVLLVDGSWSIGR SGMECLTRAEADIVLL DGSWSIGRANFRTVRS R A E G R A 2 1 0 2 0 0 1 2 0 2 2 0 0 0 0 2 0 1 0 2 0 0 17 0 1799.9418 D6RGG3;Q99715;A0A087X0A8 D6RGG3 1196 1212 COL12A1 Collagen alpha-1(XII) chain yes no 2;3 1.8711E-164 188.39 By MS/MS By MS/MS 19 18 50205000 25084000 25121000 46 379 49 103;104;105;106;107;108;109;110;111;112;113;114;115;116;117;118;119;120;121;122;123;124;125;126;127;128;129;130;131;132;133;134;135;136;137;138;139 89;90;91;92;93;94;95;96;97;98;99;100;101;102;103;104;105;106;107;108;109;110;111;112;113;114;115;116;117;118;119;120;121;122;123;124;125;126 90 37 AEALEVFCDMTSDGGGWIVFLR TIYLNGDKAEALEVFC GGWIVFLRRKNGRENF K A E L R R 2 1 0 2 1 0 2 3 0 1 2 0 1 2 0 1 1 1 0 2 0 0 22 0 2472.1454 F5H7V9;E9PC84;J3QSU6;P24821;H0YGZ3 F5H7V9 1644 1665 TNC Tenascin yes no 2 3.2059E-22 103.85 By MS/MS By MS/MS 1 2 7487000 3977900 3509100 47 435 50 140;141;142 127;128;129 128 75 3 AEAPSQVRLMDVVSKK RLAWLAVRAEAPSQVR LMDVVSKKHPVDTLFF R A E K K H 2 1 0 1 0 1 1 0 0 0 1 2 1 0 1 2 0 0 0 3 0 0 16 2 1756.9506 G5E9W2;Q9P2E5 G5E9W2 560 575 CHPF2 Chondroitin sulfate glucuronyltransferase yes no 3 0.0099663 48.177 By MS/MS By matching 1 1 1072400 579910 492520 48 575 51 143;144 130 130 683;684 0 AEDGATPSPSNETPK ASSTSSPKAEDGATPS SPSNETPKKKKKRFSF K A E P K K 2 0 1 1 0 0 2 1 0 0 0 1 0 0 3 2 2 0 0 0 0 0 15 0 1499.674 P29966 P29966 138 152 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 4.1089E-260 214.67 By MS/MS By MS/MS 2 3 22393000 11040000 11352000 49 939 52;53 145;146;147;148;149 131;132;133;134;135 134 1057;1058;2120 5 AEDGATPSPSNETPKK ASSTSSPKAEDGATPS PSNETPKKKKKRFSFK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 2 0 0 3 2 2 0 0 0 0 0 16 1 1627.7689 P29966 P29966 138 153 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 4.1497E-05 91.123 By MS/MS By MS/MS 4 3 11906000 6304400 5602000 50 939 54;55 150;151;152;153;154;155;156 136;137;138;139;140 138 1057;1058;2120 4 AEDGATPSPSNETPKKK ASSTSSPKAEDGATPS SNETPKKKKKRFSFKK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 3 0 0 3 2 2 0 0 0 0 0 17 2 1755.8639 P29966 P29966 138 154 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.00055949 75.319 By MS/MS By MS/MS 2 3 50992000 28779000 22214000 51 939 56;57 157;158;159;160;161 141;142;143;144;145 141 1057;1058;2120 5 AEEDEILNRSPR EEEDRKPKAEEDEILN EILNRSPRNRKPRRE_ K A E P R N 1 2 1 1 0 0 3 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1427.7005 P27824 P27824 574 585 CANX Calnexin yes yes 2 0.010061 62.89 By matching By MS/MS 1 1 665580000 344410000 321170000 52 934 58 162;163 146 146 1051 1 AEEKENDTVTISPK LAPEANPKAEEKENDT DTVTISPKQEGFPPKG K A E P K Q 1 0 1 1 0 0 3 0 0 1 0 2 0 0 1 1 2 0 0 1 0 0 14 1 1559.7679 Q9UGU0 Q9UGU0 1511 1524 TCF20 Transcription factor 20 yes yes 2 0.0033529 70.728 By MS/MS By MS/MS 1 1 3160700 2063500 1097200 53 1455 59 164;165 147;148 147 1759 2 AEEKSPISINVK PSSPREVKAEEKSPIS SPISINVKTVKKEPED K A E V K T 1 0 1 0 0 0 2 0 0 2 0 2 0 0 1 2 0 0 0 1 0 0 12 1 1313.7191 Q9UK58 Q9UK58 348 359 CCNL1 Cyclin-L1 yes yes 2;3 2.0884E-242 213.99 By matching By MS/MS 1 2 13634000 2934500 10700000 54 1462 60 166;167;168 149;150 149 1767 2 AEFAEYASVDR PGPQTEGKAEFAEYAS AEYASVDRNKKCRQSV K A E D R N 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 11 0 1256.5673 Q9NWQ8 Q9NWQ8 222 232 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 9.757E-06 109.66 By MS/MS By MS/MS 1 1 4901100 1803400 3097700 55 1434 61 169;170 151;152 151 2500 2 AEFTSPPSLFK ETALPSTKAEFTSPPS TSPPSLFKTGLPPSRN K A E F K T 1 0 0 0 0 0 1 0 0 0 1 1 0 2 2 2 1 0 0 0 0 0 11 0 1222.6234 Q6UN15;A0A0B4J203 Q6UN15 255 265 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 no no 2 0.0018996 78.903 By MS/MS By matching 1 1 839850 546840 293010 56 1203;138 62 171;172 153 153 170 1 AEGEPQEESPLKSK SQEKQTKKAEGEPQEE EESPLKSKSQEEPKDT K A E S K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 2 0 0 0 0 0 0 14 1 1527.7417 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 E9PQN2 167 180 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 3.6754E-71 167.92 By MS/MS By MS/MS 1 1 7660300 5087100 2573200 57 457 63 173;174 154;155 154 533 2 AEGEWEDQEALDYFSDKESGK EKGSEKGRAEGEWEDQ FSDKESGKQKFNDSEG R A E G K Q 2 0 0 3 0 1 5 2 0 0 1 2 0 1 0 2 0 1 1 0 0 0 21 1 2432.0292 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 369 389 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0017394 61.022 By MS/MS By MS/MS 1 1 12276000 6877100 5399200 58 457 64 175;176 156;157 156 534 2 AEIYALNR QELKQRQRAEIYALNR AEIYALNRVMTELEQQ R A E N R V 2 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 8 0 948.50288 Q8N300 Q8N300 37 44 CCDC23 Coiled-coil domain-containing protein 23 yes yes 2 0.0068252 101.69 By MS/MS By MS/MS 1 1 1487700 803370 684330 59 1251 65 177;178 158;159 159 2473 2 AESPAEKVPEESVLPLVQK LSSPSDTKAESPAEKV SVLPLVQKSTLADYSA K A E Q K S 2 0 0 0 0 1 4 0 0 0 2 2 0 0 3 2 0 0 0 3 0 0 19 1 2049.0994 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 430 448 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.0048352 51.535 By matching By MS/MS 1 1 2295800 1041100 1254700 60 412 66 179;180 160 160 466 1 AESPESSAIESTQSTPQK VSRRAQQRAESPESSA STQSTPQKGRGRPSKT R A E Q K G 2 0 0 0 0 2 3 0 0 1 0 1 0 0 2 5 2 0 0 0 0 0 18 0 1875.8698 Q9NTI5 Q9NTI5 1356 1373 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 2;3 0.0028017 61.48 By MS/MS By MS/MS 2 2 11507000 6093200 5414000 61 1427 67;68 181;182;183;184 161;162 161 1727;1728;1729;2224 2 AESPSPAPPPGLR VAEGGLPRAESPSPAP PAPPPGLRGTLDLQVI R A E L R G 2 1 0 0 0 0 1 1 0 0 1 0 0 0 5 2 0 0 0 0 0 0 13 0 1274.6619 Q9BUA3 Q9BUA3 306 318 C11orf84 Uncharacterized protein C11orf84 yes yes 2 0.0017069 78.287 By MS/MS By matching 1 1 8038400 4389300 3649100 62 1366 69 185;186 163 163 1631 1 AFENVTDLQWLILDHNLLENSK QIDHIDEKAFENVTDL HNLLENSKIKGRVFSK K A F S K I 1 0 3 2 0 1 2 0 1 1 5 1 0 1 0 1 1 1 0 1 0 0 22 0 2611.3282 P51884;CON__Q05443 P51884 85 106 LUM Lumican yes no 3 1.5859E-22 106.57 By MS/MS 1 3565300 0 3565300 63 996 70 187 164;165 164 14 2 AFGSGIDIKPGTPPIAGR KMSEMELKAFGSGIDI GTPPIAGRSTTPTSSP K A F G R S 2 1 0 1 0 0 0 4 0 3 0 1 0 1 3 1 1 0 0 0 0 0 18 1 1752.9523 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2664 2681 PRRC2C Protein PRRC2C yes no 3 0.0024664 65.598 By MS/MS By MS/MS 1 1 5239700 3166500 2073200 64 406 71 188;189 166;167 167 457;1978 2 AFLAELEQNSPK KAQAESNKAFLAELEQ ELEQNSPKIQKVKEAL K A F P K I 2 0 1 0 0 1 2 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 12 0 1345.6878 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 1558 1569 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 0.0076625 58.098 By matching By MS/MS 1 1 1350400 667360 683080 65 581 72 190;191 168 168 696 1 AFLEVNEEGSEAAASTAVVIAGR YVSDAFHKAFLEVNEE TAVVIAGRSLNPNRVT K A F G R S 6 1 1 0 0 0 4 2 0 1 1 0 0 1 0 2 1 0 0 3 0 0 23 0 2290.1441 P01008;Q8TCE1 P01008 403 425 SERPINC1 Antithrombin-III yes no 3 0.010387 39.935 By matching By MS/MS 1 1 2089800 1200500 889240 66 835 73 192;193 169 169 1 AFSTVPLTPVPR ILQSSDSRAFSTVPLT VPLTPVPRPSDSVSST R A F P R P 1 1 0 0 0 0 0 0 0 0 1 0 0 1 3 1 2 0 0 2 0 0 12 0 1283.7238 H0Y5D5;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3 H0Y5D5 482 493 CIZ1 Cip1-interacting zinc finger protein yes no 2 0.0017091 82.85 By MS/MS By MS/MS 1 1 1347400 751020 596420 67 497 74 194;195 170;171 170 587;2007 2 AFTTKSGLNVHQR YKCSDCGKAFTTKSGL SGLNVHQRKHTGERPY K A F Q R K 1 1 1 0 0 1 0 1 1 0 1 1 0 1 0 1 2 0 0 1 0 0 13 1 1457.7739 H9KV89;A0A087X254;Q8N8J6 H9KV89 693 705 ZNF615 Zinc finger protein 615 yes no 3 0.013896 43.382 By matching By MS/MS 1 1 1561600 809420 752190 68 80 75 196;197 172 172 1 AFVAIGDYNGHVGLGVK YLFSLPIKAFVAIGDY GHVGLGVKCSKEVATA K A F V K C 2 0 1 1 0 0 0 4 1 1 1 1 0 1 0 0 0 0 1 3 0 0 17 0 1715.8995 H0YEN5;P15880;I3L404;E9PPT0;E9PM36;E9PMM9 H0YEN5 28 44 RPS2 40S ribosomal protein S2 yes no 3 2.4293E-07 95.264 By MS/MS 1 368470 368470 0 69 615 76 198 173 173 1 AFVEDSEDEDGAGEGGSSLLQK KQLKESFRAFVEDSED GGSSLLQKRAKTRQEK R A F Q K R 2 0 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 22 0 2238.9764 H0YFD2;F8WFC1;Q8N9T8 H0YFD2 110 131 KRI1 Protein KRI1 homolog yes no 2 1.3829E-29 112.72 By MS/MS By MS/MS 1 1 28753000 15110000 13643000 70 544 77 199;200 174;175 175 638 2 AFVEDSEDEDGAGEGGSSLLQKR KQLKESFRAFVEDSED GSSLLQKRAKTRQEKA R A F K R A 2 1 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 23 1 2395.0775 H0YFD2;F8WFC1;Q8N9T8 H0YFD2 110 132 KRI1 Protein KRI1 homolog yes no 3 0.0015551 56.017 By MS/MS By matching 1 1 17580000 9515300 8064500 71 544 78 201;202 176;177 177 638 2 AGAGMITQHSSNASPINR TRRMGDGRAGAGMITQ SNASPINRIVQISGNS R A G N R I 3 1 2 0 0 1 0 2 1 2 0 0 1 0 1 3 1 0 0 0 0 0 18 0 1810.8744 Q9NWH9;H0YKH2;H7C3F4 Q9NWH9 989 1006 SLTM SAFB-like transcription modulator yes no 3 0.0011075 62.167 By MS/MS By MS/MS 1 1 2683600 1416200 1267400 72 1433 79 203;204 178;179 178 1739 2 AGAPVGGSPGLAK TEKLPRKRAGAPVGGS GGSPGLAKRGRLQPPS R A G A K R 3 0 0 0 0 0 0 4 0 0 1 1 0 0 2 1 0 0 0 1 0 0 13 0 1080.5928 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2882 2894 SRCAP Helicase SRCAP yes no 2 0.017851 48.177 By matching By MS/MS 1 1 3993400 2191100 1802300 73 114 80 205;206 180 180 1 AGDDYEVLELDDVPK RHERSLGRAGDDYEVL LELDDVPKENSSGSSP R A G P K E 1 0 0 4 0 0 2 1 0 0 2 1 0 0 1 0 0 0 1 2 0 0 15 0 1676.7781 O43164 O43164 59 73 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 2 0.0020358 62.088 By MS/MS By MS/MS 1 1 2103900 968240 1135700 74 776 81 207;208 181;182 182 2386 2 AGDLLEDSPK EKGALKRRAGDLLEDS DLLEDSPKRPKEAENP R A G P K R 1 0 0 2 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1043.5135 P51858 P51858 158 167 HDGF Hepatoma-derived growth factor yes yes 2 1.3287E-05 107.53 By MS/MS By MS/MS 1 1 14426000 6474600 7951100 75 995 82 209;210 183;184 184 1141 2 AGDLLEDSPKRPK EKGALKRRAGDLLEDS EDSPKRPKEAENPEGE R A G P K E 1 1 0 2 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 0 0 0 13 2 1424.7623 P51858 P51858 158 170 HDGF Hepatoma-derived growth factor yes yes 2;3 5.3241E-48 162.88 By MS/MS By MS/MS 2 2 142970000 79738000 63235000 76 995 83 211;212;213;214 185;186;187 185 1141 3 AGDPGEMPQSPTGLGQPK AGLAPKRRAGDPGEMP PTGLGQPKRRGRPPSK R A G P K R 1 0 0 1 0 2 1 4 0 0 1 1 1 0 4 1 1 0 0 0 0 0 18 0 1765.8305 A0A0C4DGI9;J3KPG5;F8VU39;Q9UIF9;H0YHL2 A0A0C4DGI9 324 341 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 3 0.013182 44.598 By MS/MS 1 342010 0 342010 77 158 84 215 188 188 0 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR NDVTEGQRAGEPNSPD PAGVHPPR________ R A G P R - 5 1 2 3 1 0 3 3 1 0 0 0 0 0 6 2 1 0 0 2 0 0 30 0 3013.3108 Q08J23 Q08J23 738 767 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 3 0.0061226 42.03 By MS/MS 1 3809100 3809100 0 78 1062 85 216 189 189 1215 1 AGFAGDDAPR DNGSGMCKAGFAGDDA FAGDDAPRAVFPSIVG K A G P R A 3 1 0 2 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 10 0 975.44101 P63261;P60709;I3L3I0;I3L1U9;I3L4N8;A6NL76;P68133;P68032;Q6S8J3;C9JUM1;C9JZR7;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;P63267;P62736;P0CG39;P0CG38;A5A3E0;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;F8WCH0 P63261 19 28 ACTG1;ACTB;ACTA1;ACTC1;POTEE;ACTG2;ACTA2;POTEJ;POTEI;POTEF Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member J;POTE ankyrin domain family member I;POTE ankyrin domain family member F yes no 2 0.0032932 80.455 By MS/MS By matching 1 1 8005300 5493300 2512000 79 1017 86 217;218 190 190 1 AGFSWIEVTFK TGQYEREKAGFSWIEV SWIEVTFKNPLVWVHA K A G F K N 1 0 0 0 0 0 1 1 0 1 0 1 0 2 0 1 1 1 0 1 0 0 11 0 1283.655 H7C0L5;B7ZKJ8;Q14624 H7C0L5 567 577 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 0.0010534 92.239 By MS/MS 1 2630800 0 2630800 80 296 87 219 191 191 1 AGGNTSEGREYSR AINHQRVRAGGNTSEG SEGREYSRSVIHSLVA R A G S R S 1 2 1 0 0 0 2 3 0 0 0 0 0 0 0 2 1 0 1 0 0 0 13 1 1382.6175 Q9GZU2 Q9GZU2 820 832 PEG3 Paternally-expressed gene 3 protein yes yes 3 0.002427 66.267 By MS/MS By matching 1 1 726100 349130 376970 81 1388 88 220;221 192 192 2496 0 AGGPATPLSPTR MATPLPGRAGGPATPL ATPLSPTRLSRLQEKE R A G T R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 2 0 0 0 0 0 12 0 1123.5986 Q03252 Q03252 29 40 LMNB2 Lamin-B2 yes yes 2 0.0082556 56.569 By MS/MS By MS/MS 1 1 12411000 7013900 5397500 82 1049 89 222;223 193;194 194 1199 2 AGGPTTPLSPTRLSR VPPRMGSRAGGPTTPL LSPTRLSRLQEKEELR R A G S R L 1 2 0 0 0 0 0 2 0 0 2 0 0 0 3 2 3 0 0 0 0 0 15 1 1509.8263 P20700;A0A0D9SFY5;A0A0D9SFE5;E9PBF6 P20700 15 29 LMNB1 Lamin-B1 yes no 2 0.0068547 53.168 By MS/MS By matching 1 1 2425500 1084600 1340900 83 919 90 224;225 195 195 1039;2115 1 AGGSAALSPSK GMAKKVTKAGGSAALS SAALSPSKKRKNSKKK K A G S K K 3 0 0 0 0 0 0 2 0 0 1 1 0 0 1 3 0 0 0 0 0 0 11 0 944.49271 Q92522 Q92522 24 34 H1FX Histone H1x yes yes 2 2.0424E-06 134.04 By MS/MS By MS/MS 2 1 14033000 9433000 4599700 84 1299 91 226;227;228 196;197;198;199;200;201;202 199 1532;1533 7 AGGSAALSPSKK GMAKKVTKAGGSAALS AALSPSKKRKNSKKKN K A G K K R 3 0 0 0 0 0 0 2 0 0 1 2 0 0 1 3 0 0 0 0 0 0 12 1 1072.5877 Q92522 Q92522 24 35 H1FX Histone H1x yes yes 2 8.9485E-36 154.13 By MS/MS By MS/MS 1 1 7817000 4441600 3375400 85 1299 92 229;230 203;204;205;206;207 207 1532;1533 5 AGIEIFVVVVGR KAVQEAQRAGIEIFVV IFVVVVGRQVNEPHIR R A G G R Q 1 1 0 0 0 0 1 2 0 2 0 0 0 1 0 0 0 0 0 4 0 0 12 0 1257.7445 A0A087X0S5;P12109 A0A087X0S5 963 974 COL6A1 Collagen alpha-1(VI) chain yes no 2 4.8999E-146 169.41 By MS/MS By MS/MS 6 2 7515900 4439000 3076900 86 74 93 231;232;233;234;235;236;237;238 208;209;210;211;212;213 208 6 AGLESGAEPGDGDSDTTK SKKDKKAKAGLESGAE DGDSDTTKKKKKKKKA K A G T K K 2 0 0 3 0 0 2 4 0 0 1 1 0 0 1 2 2 0 0 0 0 0 18 0 1705.7279 O60832 O60832 481 498 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 9.5491E-205 195.17 By matching By MS/MS 1 1 15089000 7669900 7419400 87 795 94 239;240 214 214 930;2079;2080 1 AGLESGAEPGDGDSDTTKK SKKDKKAKAGLESGAE GDSDTTKKKKKKKKAK K A G K K K 2 0 0 3 0 0 2 4 0 0 1 2 0 0 1 2 2 0 0 0 0 0 19 1 1833.8228 O60832 O60832 481 499 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2;3 0.0025241 70.783 By MS/MS By MS/MS 2 1 7813200 5866800 1946400 88 795 95 241;242;243 215;216;217 217 930;2079;2080 3 AGLESGAEPGDGDSDTTKKK SKKDKKAKAGLESGAE DSDTTKKKKKKKKAKE K A G K K K 2 0 0 3 0 0 2 4 0 0 1 3 0 0 1 2 2 0 0 0 0 0 20 2 1961.9178 O60832 O60832 481 500 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 0.0046159 62.193 By MS/MS 1 4499300 4499300 0 89 795 96 244 218 218 930;2079;2080 1 AGLGSPERPPK GSPPSVQRAGLGSPER GSPERPPKTSPGSPRL R A G P K T 1 1 0 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 1 1107.6037 Q9H6F5;H0YG79 Q9H6F5 54 64 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 5.4692E-06 108.32 By MS/MS By MS/MS 2 2 19211000 11923000 7288600 90 1400 97 245;246;247;248 219;220;221;222 219 1686 4 AGLGSPERPPKTSPGSPR GSPPSVQRAGLGSPER KTSPGSPRLQQGAGLE R A G P R L 1 2 0 0 0 0 1 3 0 0 1 1 0 0 5 3 1 0 0 0 0 0 18 2 1789.9435 Q9H6F5;H0YG79 Q9H6F5 54 71 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 0.0031483 48.423 By MS/MS By matching 1 1 5546900 2534700 3012200 91 1400 98 249;250 223 223 1686;1687;2220 1 AGLQFPVGR KAKTRSSRAGLQFPVG GLQFPVGRVHRLLRKG R A G G R V 1 1 0 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 9 0 943.52395 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;C9J0D1;Q71UI9;P0C0S5;Q93077;Q8IUE6;Q7L7L0;P04908;Q96QV6;P16104 A0A0U1RR32 22 30 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;H2AFV;H2AFZ;HIST1H2AC;HIST2H2AB;HIST3H2A;HIST1H2AB;HIST1H2AA;H2AFX Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-C;Histone H2A type 2-B;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX yes no 2 0.0030952 111.65 By MS/MS By matching 1 1 3944200 3005300 938950 92 200 99 251;252 224 224 1 AGMSNRQKNK ELIDSEFRAGMSNRQK MSNRQKNKAKRMAKLF R A G N K A 1 1 2 0 0 1 0 1 0 0 0 2 1 0 0 1 0 0 0 0 0 0 10 2 1132.5771 A0A0A0MTH9;O14981 A0A0A0MTH9 202 211 BTAF1 TATA-binding protein-associated factor 172 yes no 2 0.016254 44.299 By MS/MS 1 0 0 0 93 130 100 253 225 225 19 1 AGSCCLSPGGR LVKEEGPRAGSCCLSP CCLSPGGRAELEGRDK R A G G R A 1 1 0 0 2 0 0 3 0 0 1 0 0 0 1 2 0 0 0 0 0 0 11 0 1120.4754 E7ER32;A0A087X287;B0QY83;A0A087WU73;W0Z7M9;Q969V6 E7ER32 505 515 MKL1;mkl1 MKL/myocardin-like protein 1 yes no 2 0.0020575 76.357 By MS/MS By matching 1 1 1427300 633360 793920 94 26 101 254;255 226 226 23 1 AGSSGNSCITYQPSVSGEHK SGSSFSRRAGSSGNSC PSVSGEHKAQVTTKAE R A G H K A 1 0 1 0 1 1 1 3 1 1 0 1 0 0 1 5 1 0 1 1 0 0 20 0 2064.9171 A6PW57;Q99755 A6PW57 461 480 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha yes no 3 0.0052377 47.796 By MS/MS By matching 1 1 1468300 754690 713570 95 239 102 256;257 227 227 291 1 AGSSTPGDAPPAVAEVQGR AGSSEQPRAGSSTPGD AVAEVQGRSDGSGESA R A G G R S 4 1 0 1 0 1 1 3 0 0 0 0 0 0 3 2 1 0 0 2 0 0 19 0 1765.8595 Q7Z6Z7 Q7Z6Z7 2885 2903 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.017077 48.371 By MS/MS 1 545570 0 545570 96 1226 103 258 228 228 0 AGTDSPVSCASVTEER SESENEPKAGTDSPVS CASVTEERVASDSPKP K A G E R V 2 1 0 1 1 0 2 1 0 0 0 0 0 0 1 3 2 0 0 2 0 0 16 0 1664.7312 E9PEI0;Q69YH5 E9PEI0 691 706 CDCA2 Cell division cycle-associated protein 2 yes no 2 0.01125 47.712 By MS/MS By matching 1 1 1399600 758300 641250 97 437 104 259;260 229 229 515 1 AHASLMSPGR IPGAQEKKAHASLMSP ASLMSPGRRKSESQRK K A H G R R 2 1 0 0 0 0 0 1 1 0 1 0 1 0 1 2 0 0 0 0 0 0 10 0 1025.5076 Q14207 Q14207 201 210 NPAT Protein NPAT yes yes 2 0.018092 54.259 By MS/MS 1 259650 0 259650 98 1097 105 261 230 230 1 AHFNAMFQPSSPTR HRMQLESRAHFNAMFQ FQPSSPTRRPGFSPTS R A H T R R 2 1 1 0 0 1 0 0 1 0 0 0 1 2 2 2 1 0 0 0 0 0 14 0 1589.7409 H0Y4Q6;Q8WUA4 H0Y4Q6 392 405 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2;3 1.4713E-07 103.66 By MS/MS By MS/MS 3 3 11863000 7048400 4815000 99 586 106;107 262;263;264;265;266;267 231;232;233;234;235 234 97 700;701;2035 4 AHLSENELEALEK QNLEIHRRAHLSENEL NELEALEKNDMEQMKY R A H E K N 2 0 1 0 0 0 4 0 1 0 3 1 0 0 0 1 0 0 0 0 0 0 13 0 1481.7362 A0A0A0MR66;P98175 A0A0A0MR66 859 871 RBM10 RNA-binding protein 10 yes no 2 0.010331 53.136 By matching By MS/MS 1 1 651980 313200 338780 100 96 108 268;269 236 236 119 1 AIEPQKEEADENYNSVNTR REIRLQLKAIEPQKEE NYNSVNTRMR______ K A I T R M 2 1 3 1 0 1 4 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 19 1 2206.0138 C9JFM5;Q12846 C9JFM5 155 173 STX4 Syntaxin-4 yes no 3 0.0095261 46.403 By MS/MS By matching 1 1 3859100 2419600 1439500 101 329 109 270;271 237 237 392 1 AIGSTSKPQESPK SSASPVSRAIGSTSKP SKPQESPKGKRKLDLN R A I P K G 1 0 0 0 0 1 1 1 0 1 0 2 0 0 2 3 1 0 0 0 0 0 13 1 1328.6936 F5H8D7;P18887;M0QYS5 F5H8D7 200 212 XRCC1 DNA repair protein XRCC1 yes no 2 6.4619E-10 130.47 By MS/MS By MS/MS 1 1 5473100 2749700 2723400 102 506 110 272;273 238;239 238 598 2 AILVDLEPGTMDSVR TGGKYVPRAILVDLEP PGTMDSVRSGPFGQIF R A I V R S 1 1 0 2 0 0 1 1 0 1 2 0 1 0 1 1 1 0 0 2 0 0 15 0 1614.8287 Q5JP53;P07437;Q9BVA1;Q13885;A0A0B4J269;Q13509;G3V5W4;G3V2R8;G3V3R4;G3V2N6 Q5JP53 45 59 TUBB;TUBB2B;TUBB2A;TUBB3 Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain yes no 2 0.0027858 66.595 By MS/MS By MS/MS 1 1 983640 594610 389030 103 864 111 274;275 240;241;242 242 3 AISAPTSPTR AVKRMYDRAISAPTSP SAPTSPTRLSHSGKRS R A I T R L 2 1 0 0 0 0 0 0 0 1 0 0 0 0 2 2 2 0 0 0 0 0 10 0 999.53491 B0QY95;Q9NQG6 B0QY95 53 62 MIEF1 Mitochondrial dynamics protein MID51 yes no 2 3.421E-05 113.61 By MS/MS By MS/MS 1 1 5726400 3284400 2442100 104 248 112 276;277 243;244 243 321 2 AISTGSLASSTLNK VRGFNMGRAISTGSLA LASSTLNKLAVRPLSV R A I N K L 2 0 1 0 0 0 0 1 0 1 2 1 0 0 0 4 2 0 0 0 0 0 14 0 1348.7198 Q12923 Q12923 906 919 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 1.0192E-13 127.3 By MS/MS By MS/MS 1 1 3489300 1923000 1566300 105 1072 113 278;279 245;246 245 1231 2 AISTPETPLTK PSKGSQKRAISTPETP TPETPLTKRSVSTRSP R A I T K R 1 0 0 0 0 0 1 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 11 0 1156.634 E9PIQ6;Q14181 E9PIQ6 84 94 POLA2 DNA polymerase alpha subunit B yes no 2 0.010321 49.418 By MS/MS 1 392230 0 392230 106 452 114 280 247 247 1996;1997 1 AISTPETPLTKR PSKGSQKRAISTPETP PETPLTKRSVSTRSPH R A I K R S 1 1 0 0 0 0 1 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 12 1 1312.7351 E9PIQ6;Q14181 E9PIQ6 84 95 POLA2 DNA polymerase alpha subunit B yes no 2 0.014876 47.606 By MS/MS By MS/MS 1 1 1978700 1064700 914080 107 452 115 281;282 248;249 249 1996;1997 0 AITPPHPASQANIIFDITEGNLR PEEIIFLRAITPPHPA DITEGNLRDSFDIIKR R A I L R D 3 1 2 1 0 1 1 1 1 4 1 0 0 1 3 1 2 0 0 0 0 0 23 0 2474.2918 P23142 P23142 620 642 FBLN1 Fibulin-1 yes yes 3 0.00046906 55.127 By matching By MS/MS 1 1 2532900 1608000 924950 108 925 116 283;284 250 250 1 AITSLLGGGSPK ASTNARNKAITSLLGG LLGGGSPKNNTAAETE K A I P K N 1 0 0 0 0 0 0 3 0 1 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1099.6237 Q6KC79 Q6KC79 2649 2660 NIPBL Nipped-B-like protein yes yes 2 0.0053711 65.495 By matching By MS/MS 1 1 9698500 4948100 4750400 109 1189 117 285;286 251 251 1397 1 AKEVELVSE KKKKKKKKAKEVELVS KEVELVSE________ K A K S E - 1 0 0 0 0 0 3 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 1 1002.5233 O60832 O60832 506 514 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 0.002125 91.469 By MS/MS By matching 1 1 6547100 3257300 3289800 110 795 118 287;288 252 252 931 1 AKLSAPLAGMGNAK ASEDGRVRAKLSAPLA LAGMGNAKADSRGRSR R A K A K A 4 0 1 0 0 0 0 2 0 0 2 2 1 0 1 1 0 0 0 0 0 0 14 1 1327.7282 E3W994;J3KR49;A0A0U1RQI6;E7ERI8;E7EW49;O75122 E3W994 427 440 CLASP2 CLIP-associating protein 2 yes no 2 0.0026428 78.505 By MS/MS By MS/MS 2 2 5542600 2642500 2900000 111 195 119;120 289;290;291;292 253;254;255;256 253 32 245 3 AKPAMPQDSVPSPR DEVAPAKKAKPAMPQD QDSVPSPRSLQGKSTT K A K P R S 2 1 0 1 0 1 0 0 0 0 0 1 1 0 4 2 0 0 0 1 0 0 14 1 1479.7504 P53396 P53396 470 483 ACLY ATP-citrate synthase yes yes 2;3 1.7378E-07 104.95 By MS/MS By MS/MS 3 3 14095000 7711900 6382800 112 1004 121;122 293;294;295;296;297;298 257;258;259;260;261;262;263;264 264 180 1151;1152 7 AKPPADPAAAASPCR DAAKGKVKAKPPADPA AAAASPCRAAAGGQGS K A K C R A 6 1 0 1 1 0 0 0 0 0 0 1 0 0 4 1 0 0 0 0 0 0 15 1 1478.73 Q9GZT9 Q9GZT9 114 128 EGLN1 Egl nine homolog 1 yes yes 2 0.0022588 63.546 By matching By MS/MS 1 1 4480300 2283200 2197200 113 1387 123 299;300 265 265 1665 1 AKTPVTLK KREPLKGRAKTPVTLK AKTPVTLKQRRVEHNQ R A K L K Q 1 0 0 0 0 0 0 0 0 0 1 2 0 0 1 0 2 0 0 1 0 0 8 1 856.5382 G5E972;P42167;H0YJH7 G5E972 206 213 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2 0.00027866 141.89 By MS/MS By MS/MS 1 1 39299000 21232000 18067000 114 572 124 301;302 266;267 267 2029 2 AKTPVTLKQR KREPLKGRAKTPVTLK TPVTLKQRRVEHNQVE R A K Q R R 1 1 0 0 0 1 0 0 0 0 1 2 0 0 1 0 2 0 0 1 0 0 10 2 1140.6979 G5E972;P42167;H0YJH7 G5E972 206 215 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3 0.0011442 71.976 By matching By MS/MS 1 1 775570 177710 597870 115 572 125 303;304 268 268 2029 1 AKTQTPPVSPAPQPTEER RKLEEQARAKTQTPPV APQPTEERLPSSPVYE R A K E R L 2 1 0 0 0 2 2 0 0 0 0 1 0 0 5 1 3 0 0 1 0 0 18 1 1932.9905 Q14247;H0YEV2;H0YCD9 Q14247 397 414 CTTN Src substrate cortactin yes no 3 0.0028396 51.301 By MS/MS By MS/MS 1 1 9578400 3843100 5735300 116 1098 126 305;306 269;270 269 1270;2152 2 AKYVKTHQVIAR VERLEADKAKYVKTHQ KTHQVIARRQEPALRG K A K A R R 2 1 0 0 0 1 0 0 1 1 0 2 0 0 0 0 1 0 1 2 0 0 12 2 1412.8252 Q8TAY7 Q8TAY7 26 37 FAM110D Protein FAM110D yes yes 2 0.010651 43.991 By MS/MS 1 208220 0 208220 117 1277 127 307 271 271 2196;2476 1 ALAAAGYDVEK VSLAALKKALAAAGYD AAGYDVEKNNSRIKLG K A L E K N 4 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1106.5608 P10412;P16403;P16402;P22492;Q02539 P10412 65 75 HIST1H1E;HIST1H1C;HIST1H1D;HIST1H1T;HIST1H1A Histone H1.4;Histone H1.2;Histone H1.3;Histone H1t;Histone H1.1 yes no 2 0.0038699 74.464 By MS/MS By MS/MS 1 1 3380600 2344100 1036500 118 881 128 308;309 272;273 273 2 ALALGALQNIR KLNTYNDKALALGALQ LGALQNIRYRGGNTRT K A L I R Y 3 1 1 0 0 1 0 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1138.6822 D6RGG3;Q99715;A0A087X0A8;H0Y5N9 D6RGG3 2385 2395 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0088476 68.224 By MS/MS 1 700400 700400 0 119 379 129 310 274 274 1 ALDIDSDEESEPK LYQNYKEKALDIDSDE SDEESEPKEQKSDEKI K A L P K E 1 0 0 3 0 0 3 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 13 0 1446.6362 Q96DR7 Q96DR7 387 399 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 0.0052328 60.401 By MS/MS By MS/MS 1 1 1547400 631630 915820 120 1326 130 311;312 275;276 275 1561 2 ALEEGDGSVSGSSPR ERKKAELRALEEGDGS SVSGSSPRSDISQPAS R A L P R S 1 1 0 1 0 0 2 3 0 0 1 0 0 0 1 4 0 0 0 1 0 0 15 0 1446.6587 Q8N3X1 Q8N3X1 420 434 FNBP4 Formin-binding protein 4 yes yes 2 0.0013167 63.31 By MS/MS By matching 1 1 2589300 1413200 1176100 121 1254 131 313;314 277 277 1480 1 ALEESESSQLISPPLAQAIR SPLSSKRKALEESESS PPLAQAIRDYVNSLLV K A L I R D 3 1 0 0 0 2 3 0 0 2 3 0 0 0 2 4 0 0 0 0 0 0 20 0 2138.1219 P42166 P42166 359 378 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.0092476 53.557 By MS/MS By matching 1 1 8356700 7025600 1331100 122 960 132 315;316 278 278 1076;1077;1078 1 ALELDSNLYR QACVLMIKALELDSNL ELDSNLYRIGQSKVFF K A L Y R I 1 1 1 1 0 0 1 0 0 0 3 0 0 0 0 1 0 0 1 0 0 0 10 0 1192.6088 P35579 P35579 746 755 MYH9 Myosin-9 yes yes 2 0.018788 62.546 By MS/MS 1 250200 250200 0 123 950 133 317 279 279 1 ALELDSNNEK AAIESCNKALELDSNN ELDSNNEKGLFRRGEA K A L E K G 1 0 2 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1131.5408 Q02790 Q02790 345 354 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 0.0071055 69.598 By MS/MS By matching 1 1 1004900 543470 461470 124 1043 134 318;319 280 280 1 ALEVAEYLTPVLK VINTVKGKALEVAEYL EYLTPVLKESKFKETG K A L L K E 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 0 1 0 1 2 0 0 13 0 1444.8177 F8WDI0;Q9NT62 F8WDI0 12 24 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes no 2 0.0001198 100.72 By MS/MS By MS/MS 1 1 5141100 2879800 2261400 125 540 135 320;321 281;282 281 2347 2 ALILVGLER NLRQEGVRALILVGLE LILVGLERVVNLERLM R A L E R V 1 1 0 0 0 0 1 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 9 0 982.61752 E7ENL6;P12111 E7ENL6 1369 1377 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.00096951 98.299 By MS/MS By MS/MS 1 1 4051600 2662500 1389000 126 403 136 322;323 283;284 283 2 ALIQTCLNSPDSPPRSDPTTDQR MITSETGKALIQTCLN SDPTTDQRMSATGFEE K A L Q R M 1 2 1 3 1 2 0 0 0 1 2 0 0 0 4 3 3 0 0 0 0 0 23 1 2568.2238 P11831 P11831 213 235 SRF Serum response factor yes yes 3 0.0027418 50.957 By MS/MS By matching 1 1 6146300 3963600 2182600 127 891 137 324;325 285 285 1018 1 ALLLLCGEDD DTSGDYKKALLLLCGE LLLCGEDD________ K A L D D - 1 0 0 2 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 10 0 1117.5325 D6RBE9;D6RBL5;P08758 D6RBE9 211 220 ANXA5 Annexin;Annexin A5 yes no 2 0.0043584 73.975 By MS/MS 1 415160 0 415160 128 372 138 326 286 286 1 ALPNNTSSSPQPK LPPGSTKRALPNNTSS TSSSPQPKKKPLDGEY R A L P K K 1 0 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 13 0 1339.6732 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 148 160 TP53 Cellular tumor antigen p53 yes no 2 9.8171E-11 131.79 By MS/MS By MS/MS 1 1 29372000 14997000 14375000 129 65 139 327;328 287;288;289;290 287 72;73 4 ALPSLNTGSSSPR QTSCNPSRALPSLNTG NTGSSSPRGVEEPDVI R A L P R G 1 1 1 0 0 0 0 1 0 0 2 0 0 0 2 4 1 0 0 0 0 0 13 0 1285.6626 O14545 O14545 317 329 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 1.1321E-06 104.7 By MS/MS By MS/MS 1 1 30607000 17081000 13526000 130 759 140 329;330 291;292 292 884;885 2 ALQHTESPSETNKPHSK PSSAKKPKALQHTESP ETNKPHSKSKKRHLDQ K A L S K S 1 0 1 0 0 1 2 0 2 0 1 2 0 0 2 3 2 0 0 0 0 0 17 1 1889.9232 Q14669;G5E9G6;C9JLJ5;C9JSX9;C9JLD7 Q14669 94 110 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 4 0.0029833 47.537 By matching By MS/MS 1 1 5952900 2906000 3046900 131 1103 141 331;332 293 293 1276;2153 1 ALQLSNSPGASSAFLK SADCAKDKALQLSNSP GASSAFLKAETEHNKE K A L L K A 3 0 1 0 0 1 0 1 0 0 3 1 0 1 1 4 0 0 0 0 0 0 16 0 1589.8413 Q12802;H0YMW2 Q12802 977 992 AKAP13 A-kinase anchor protein 13 yes no 2 0.016014 44.44 By MS/MS By matching 1 1 747910 452240 295670 132 1066 142 333;334 294 294 1 ALSASHTDLAH NNCLADSRALSASHTD ASHTDLAH________ R A L A H - 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1121.5465 H0YG16;H0YJK1 H0YG16 258 268 KLC1 yes no 2 8.4458E-06 129.88 By MS/MS By MS/MS 1 1 15530000 8041800 7488200 133 619 143 335;336 295;296 296 740 2 ALSDREEEEEDDEEEEEEVEAAAQR AARSEDGRALSDREEE EVEAAAQRRLAKQISP R A L Q R R 4 2 0 3 0 1 12 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 25 1 2935.1963 Q8N3E9 Q8N3E9 494 518 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 yes yes 3 0.0011647 52.669 By MS/MS By matching 1 1 3712100 2145900 1566200 134 1252 144 337;338 297 297 1477 1 ALSGVLEQDRVQSLK KNKFDVQKALSGVLEQ QDRVQSLKDKNEATVS K A L L K D 1 1 0 1 0 2 1 1 0 0 3 1 0 0 0 2 0 0 0 2 0 0 15 1 1641.905 E9PJ90;E9PN23;G5E991;E9PMN1;E9PLR4;Q9Y450 E9PJ90 51 65 HBS1L HBS1-like protein yes no 3 0.0061894 51.546 By matching By MS/MS 1 1 788050 407280 380770 135 455 145 339;340 298 298 532 1 ALSPVIPLIPR GRWEQEDRALSPVIPL PVIPLIPRASIPVFPD R A L P R A 1 1 0 0 0 0 0 0 0 2 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1174.7438 O14686 O14686 4736 4746 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.0026843 72.652 By MS/MS 1 610650 0 610650 136 763 146 341 299 299 890 1 ALSSGGSITSPPLSPALPK NFGPEWLRALSSGGSI PLSPALPKYKLADYRY R A L P K Y 2 0 0 0 0 0 0 2 0 1 3 1 0 0 4 5 1 0 0 0 0 0 19 0 1778.9778 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2 I1E4Y6 17 35 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 9.4187E-12 100.04 By MS/MS 1 4970400 0 4970400 137 687 147 342 300 300 810;811;2058 1 ALSSLHGDDQDSEDEVLTIPEVK HITTKSVKALSSLHGD VLTIPEVKVHSGRGAG K A L V K V 1 0 0 4 0 1 3 1 1 1 3 1 0 0 1 3 1 0 0 2 0 0 23 0 2496.1868 P11717 P11717 2398 2420 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 3 0.0036953 46.958 By MS/MS 1 8529500 0 8529500 138 890 148 343 301 301 1016 1 ALVEFESNPEETREPGSPPSVQR TSVSRTRRALVEFESN GSPPSVQRAGLGSPER R A L Q R A 1 2 1 0 0 1 5 1 0 0 1 0 0 1 4 3 1 0 0 2 0 0 23 1 2554.23 Q9H6F5;H0YG79 Q9H6F5 31 53 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 9.4159E-12 87.24 By MS/MS By MS/MS 1 1 37990000 20922000 17068000 139 1400 149 344;345 302;303;304 302 1688 3 ALVLIAFAQYLQQCPFEDHVK DLGEENFKALVLIAFA CPFEDHVKLVNEVTEF K A L V K L 3 0 0 1 1 3 1 0 1 1 3 1 0 2 1 0 0 0 1 2 0 0 21 0 2489.2777 A0A0C4DGB6;CON__P02768-1;P02768;A0A087WWT3;H7C013 A0A0C4DGB6 45 65 ALB Serum albumin yes no 3 3.0437E-36 114.4 By MS/MS By MS/MS 1 1 16208000 11573000 4634600 + 140 152 150 346;347 305;306 306 2 ALVVPEPEPDSDSNQER GDLLTERKALVVPEPE DSDSNQERKDD_____ K A L E R K 1 1 1 2 0 1 3 0 0 0 1 0 0 0 3 2 0 0 0 2 0 0 17 0 1880.8752 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 126 142 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 2 0.0024477 58.83 By MS/MS By MS/MS 1 2 12684000 6889700 5794300 141 310 151 348;349;350 307;308;309 309 370 3 ALYLQYTDETFR RIGRLYKKALYLQYTD QYTDETFRTTIEKPVW K A L F R T 1 1 0 1 0 1 1 0 0 0 2 0 0 1 0 0 2 0 2 0 0 0 12 0 1518.7355 E9PFZ2;P00450;D6RE86 E9PFZ2 70 81 CP Ceruloplasmin yes no 2 0.0013604 96.342 By matching By MS/MS 1 1 1047800 109060 938710 142 444 152 351;352 310;311 310 2 AMGIMNSFVNDIFER PDTGISSKAMGIMNSF FVNDIFERIAGEASRL K A M E R I 1 1 2 1 0 0 1 1 0 2 0 0 2 2 0 1 0 0 0 1 0 0 15 0 1742.812 U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899 U3KQK0 59 73 HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J yes no 2 0.001431 78.096 By MS/MS By MS/MS 1 2 4106200 1731100 2375100 143 793 153;154 353;354;355 312;313;314 314 124;125 3 AMSLNTLNVDAPR AGAAGMKRAMSLNTLN TLNVDAPRAPGTQFPS R A M P R A 2 1 2 1 0 0 0 0 0 0 2 0 1 0 1 1 1 0 0 1 0 0 13 0 1400.7082 Q6P597 Q6P597 464 476 KLC3 Kinesin light chain 3 yes yes 2 0.00029181 96.113 By MS/MS By MS/MS 2 2 3786200 2075900 1710300 144 1195 155;156 356;357;358;359 315;316;317 315 215 1402 3 AMSTTSISSPQPGK EIFKQKERAMSTTSIS ISSPQPGKLRSPFLQK R A M G K L 1 0 0 0 0 1 0 1 0 1 0 1 1 0 2 4 2 0 0 0 0 0 14 0 1390.6762 H0Y5J4;B4DDD6;Q9UJU6 H0Y5J4 196 209 DBNL Drebrin-like protein yes no 2 2.331E-45 158.31 By MS/MS By MS/MS 2 2 13899000 7658900 6240600 145 261 157;158 360;361;362;363 318;319;320;321 320 46 330;1948;1949 4 ANHTFNSSSSQYCR PITKSWSRANHTFNSS SSSSQYCRPISTQSIT R A N C R P 1 1 2 0 1 1 0 0 1 0 0 0 0 1 0 4 1 0 1 0 0 0 14 0 1657.6903 Q9UQC2 Q9UQC2 552 565 GAB2 GRB2-associated-binding protein 2 yes yes 2 0.012984 48.44 By MS/MS 1 0 0 0 146 1488 159 364 322 322 2512 1 ANIRDNGDGTYTVSYLPDMSGR DPEGKPKKANIRDNGD YLPDMSGRYTITIKYG K A N G R Y 1 2 2 3 0 0 0 3 0 1 1 0 1 0 1 2 2 0 2 1 0 0 22 1 2401.0968 Q14315 Q14315 1588 1609 FLNC Filamin-C yes yes 3 0.01918 42.172 By MS/MS 1 0 0 0 147 1100 160 365 323 323 1 ANQQFLVYCEIDGSGNGWTVFQK LYFIKPLKANQQFLVY NGWTVFQKRLDGSVDF K A N Q K R 1 0 2 1 1 3 1 3 0 1 1 1 0 2 0 1 1 1 1 2 0 0 23 0 2660.2329 C9JEU5;C9JC84;P02679;C9JPQ9;C9JU00 C9JEU5 208 230 FGG Fibrinogen gamma chain yes no 2;3 0 174.04 By MS/MS By MS/MS 4 3 117360000 77841000 39522000 148 328 161;162 366;367;368;369;370;371;372 324;325;326;327;328 324 5 ANSDIISLNFR LGMENFARANSDIISL DIISLNFRSASMISSD R A N F R S 1 1 2 1 0 0 0 0 0 2 1 0 0 1 0 2 0 0 0 0 0 0 11 0 1248.6463 Q8TC76 Q8TC76 299 309 FAM110B Protein FAM110B yes yes 2 0.0056255 66.989 By MS/MS By matching 1 1 1200100 660960 539120 149 1278 163 373;374 329 329 1509 1 ANSDTDLVTSESR PENMTLQRANSDTDLV DLVTSESRSSLTASMY R A N S R S 1 1 1 2 0 0 1 0 0 0 1 0 0 0 0 3 2 0 0 1 0 0 13 0 1393.6321 C9JHL2;C9JPI9;Q9P2P5 C9JHL2 46 58 HECW2 E3 ubiquitin-protein ligase HECW2 yes no 2 0.0019609 73.781 By MS/MS By MS/MS 1 1 1805400 871660 933780 150 331 164 375;376 330;331 331 394 2 ANSFVGTAQYVSPELLTEK SPESKQARANSFVGTA SPELLTEKSACKSSDL R A N E K S 2 0 1 0 0 1 2 1 0 0 2 1 0 1 1 2 2 0 1 2 0 0 19 0 2053.0368 E9PER6;Q6A1A2;O15530 E9PER6 212 230 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 yes no 2 0.0038749 55.267 By MS/MS By matching 1 1 4092500 2311300 1781200 151 438 165 377;378 332 332 516 1 ANSLGDLYAQK RQLSTCQRANSLGDLY LGDLYAQKNSGVTANG R A N Q K N 2 0 1 1 0 1 0 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 11 0 1178.5932 Q13009 Q13009 229 239 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 yes yes 2 0.0101 57.164 By matching By MS/MS 1 1 4140600 2265400 1875300 152 1075 166 379;380 333 333 1234 1 ANSPEKPPEAGAAHKPR ASRTQVQKANSPEKPP AGAAHKPRARLAALKR K A N P R A 4 1 1 0 0 0 2 1 1 0 0 2 0 0 4 1 0 0 0 0 0 0 17 2 1755.9016 F8WDB4;Q9UFC0 F8WDB4 58 74 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 0.0006548 81.226 By MS/MS By matching 1 1 8594800 5920600 2674200 153 539 167 381;382 334 334 633 1 ANVSSPHR XIHEQWEKANVSSPHR ANVSSPHREFPPATAR K A N H R E 1 1 1 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 0 1 0 0 8 0 866.43586 H0Y555;Q5QPM9;Q5QPM7;Q92530 H0Y555 9 16 PSMF1 Proteasome inhibitor PI31 subunit yes no 2 0.012321 74.173 By matching By MS/MS 1 1 1340100 616760 723390 154 590 168 383;384 335 335 708;709 1 APAGPSLEETSVSSPK SPPDWWKKAPAGPSLE ETSVSSPKGSSEPCWL K A P P K G 2 0 0 0 0 0 2 1 0 0 1 1 0 0 3 4 1 0 0 1 0 0 16 0 1555.773 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 477 492 HEATR6 HEAT repeat-containing protein 6 yes no 2 0.00012337 84.479 By MS/MS By MS/MS 1 1 2626900 1372200 1254700 155 54 169 385;386 336;337 336 59;60 2 APIDTSDVEEK ITAFKMEKAPIDTSDV DTSDVEEKAEEIIAEA K A P E K A 1 0 0 2 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1202.5667 D6RIY6;Q06265 D6RIY6 285 295 EXOSC9 Exosome complex component RRP45 yes no 2 0.0061908 83.081 By matching By MS/MS 1 1 2082700 941770 1140900 156 381 170 387;388 338 338 437;1968 1 APLKPYPVSPSDK EFIFTTIKAPLKPYPV YPVSPSDKVLIQEKTQ K A P D K V 1 0 0 1 0 0 0 0 0 0 1 2 0 0 4 2 0 0 1 1 0 0 13 1 1397.7555 Q5TCC6;J3KR24;A0A0A0MSX9;P41252 Q5TCC6 92 104 IARS Isoleucine--tRNA ligase, cytoplasmic yes no 2;3 0.0073992 62.732 By MS/MS By MS/MS 1 2 2665800 1467700 1198100 157 124 171 389;390;391 339;340 339 151;152 2 APQTSSSPPPVR HSPSPRPRAPQTSSSP SSSPPPVRRGASSSPQ R A P V R R 1 1 0 0 0 1 0 0 0 0 0 0 0 0 4 3 1 0 0 1 0 0 12 0 1222.6306 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 699 710 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0 240.18 By MS/MS By MS/MS 2 1 18398000 10784000 7614300 158 247 172;173 392;393;394 341;342;343 342 302 2 APSASVDSSLYNLPR IYDSPPSRAPSASVDS SSLYNLPRSYSHDVLP R A P P R S 2 1 1 1 0 0 0 0 0 0 2 0 0 0 2 4 0 0 1 1 0 0 15 0 1575.7893 B7Z3B9;Q13480 B7Z3B9 146 160 GAB1 GRB2-associated-binding protein 1 yes no 2 0.00086204 83.137 By MS/MS By matching 1 1 2274500 1348400 926040 159 285 174 395;396 344 344 2303 1 APSPAPSSVPLGSEKPSNVSQDR QSVSSGVRAPSPAPSS PSNVSQDRKVPVPIGT R A P D R K 2 1 1 1 0 1 1 1 0 0 1 1 0 0 5 6 0 0 0 2 0 0 23 1 2306.1503 H0YM23;O75179 H0YM23 2283 2305 ANKRD17 Ankyrin repeat domain-containing protein 17 yes no 3 0.0077715 48.115 By matching By MS/MS 1 1 2278600 1424600 854100 160 627 175 397;398 345 345 749 0 APSPTKPLR AAQRSGPRAPSPTKPL PSPTKPLRRSQRKSGS R A P L R R 1 1 0 0 0 0 0 0 0 0 1 1 0 0 3 1 1 0 0 0 0 0 9 1 965.56581 B5MBX0;Q96FF9 B5MBX0 19 27 CDCA5 Sororin yes no 2 0.01181 70.908 By MS/MS By matching 1 1 4258700 2264200 1994500 161 274 176 399;400 346 346 339 1 APSSPVAKPGPVK AKVPASKRAPSSPVAK VAKPGPVKTLTRKKNK R A P V K T 2 0 0 0 0 0 0 1 0 0 0 2 0 0 4 2 0 0 0 2 0 0 13 1 1233.7081 A0A0C4DG31;Q9GZR2 A0A0C4DG31 12 24 REXO4 RNA exonuclease 4 yes no 2 0.0034435 73.273 By matching By MS/MS 1 1 3021200 1566100 1455200 162 147 177 401;402 347 347 184 1 APVHFVEPLSPTGVAGHR NSQDHKVKAPVHFVEP PTGVAGHRKAPRLGQG K A P H R K 2 1 0 0 0 0 1 2 2 0 1 0 0 1 3 1 1 0 0 3 0 0 18 0 1869.985 Q5T5Y3 Q5T5Y3 1071 1088 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 3 0.0026156 53.958 By matching By MS/MS 1 1 1880900 977150 903790 163 1170 178 403;404 348 348 1376 1 APVPSTCSSTFPEELSPPSHQAK DLENFLQKAPVPSTCS SPPSHQAKREIRFLEL K A P A K R 2 0 0 0 1 1 2 0 1 0 1 1 0 1 5 5 2 0 0 1 0 0 23 0 2453.1533 A0A087WY61;Q14980;F5H0Z7;F5H763;F5H6Y5;F5H4J1 A0A087WY61 154 176 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.00065932 55.127 By matching By MS/MS 1 1 4802000 2887600 1914500 164 55 179 405;406 349 349 61 1 APVQPQQSPAAAPGGTDEKPSGK MEEGGRDKAPVQPQQS TDEKPSGKERRDAGDK K A P G K E 4 0 0 1 0 3 1 3 0 0 0 2 0 0 5 2 1 0 0 1 0 0 23 1 2217.1026 F8WBS8;C9JPC0;Q13200 F8WBS8 9 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 3 0.00028131 72.167 By MS/MS By matching 1 1 4394300 2377900 2016400 165 336 180 407;408 350 350 399 1 AQAVSEEEEEEEGKSSSPK SKEAPKRKAQAVSEEE EGKSSSPKKKIKLKKS K A Q P K K 2 0 0 0 0 1 7 1 0 0 0 2 0 0 1 4 0 0 0 1 0 0 19 1 2048.9022 G3V529;Q9GZR7 G3V529 35 53 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 0.0014008 73.918 By MS/MS By matching 1 1 3220300 2000700 1219600 166 562 181 409;410 351 351 662 1 AQEEYERDHCSGSR MKKRKMQRAQEEYERD RDHCSGSRGGGGLPRP R A Q S R G 1 2 0 1 1 1 3 1 1 0 0 0 0 0 0 2 0 0 1 0 0 0 14 1 1722.7016 Q6NUJ2 Q6NUJ2 97 110 C11orf87 Uncharacterized protein C11orf87 yes yes 2 0.014773 46.844 By MS/MS 1 2149700 2149700 0 167 1190 182 411 352 352 2468 0 AQGEPVAGHESPKIPYEK QLRDRLCRAQGEPVAG SPKIPYEKQQLPKGRP R A Q E K Q 2 0 0 0 0 1 3 2 1 1 0 2 0 0 3 1 0 0 1 1 0 0 18 1 1935.969 H0YAB3;D6RHZ5;H7BXG7;D6REX3;O94979 H0YAB3 406 423 SEC31A Protein transport protein Sec31A yes no 3 0.0017446 70.41 By MS/MS By matching 1 1 22299000 12459000 9840200 168 377 183 412;413 353 353 435 1 AQIPEGDYLSYR GDPGSTRRAQIPEGDY EGDYLSYREFHSAGRT R A Q Y R E 1 1 0 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 0 12 0 1410.6779 Q96RT1 Q96RT1 1097 1108 ERBB2IP Protein LAP2 yes yes 2 0.0046427 72.096 By MS/MS 1 1282100 0 1282100 169 1348 184 414 354 354 2489 1 AQISSPNLR VARIAPQRAQISSPNL QISSPNLRTRPPPRRE R A Q L R T 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 9 0 984.53524 H0Y507;Q5TCZ1 H0Y507 344 352 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.0076468 70.056 By matching By MS/MS 1 1 1084900 517790 567150 170 589 185 415;416 355 355 705 1 AQKLPDLSPVENK QPRAGPIKAQKLPDLS DLSPVENKEHKPGPIG K A Q N K E 1 0 1 1 0 1 1 0 0 0 2 2 0 0 2 1 0 0 0 1 0 0 13 1 1437.7827 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2100 2112 PRRC2C Protein PRRC2C yes no 2 0.0032331 74.678 By matching By MS/MS 1 1 2434100 1292900 1141200 171 406 186 417;418 356 356 458 1 AQLEPVASPAK ELQLVTYKAQLEPVAS EPVASPAKKPKVQSGS K A Q A K K 3 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 11 0 1109.6081 Q15149 Q15149 1428 1438 PLEC Plectin yes yes 2 0.017733 52.576 By matching By MS/MS 1 1 843260 362100 481160 172 1120 187 419;420 357 357 1 AQLSPGIYDDTSAR STLHEAPKAQLSPGIY IYDDTSARRTPVSYQN K A Q A R R 2 1 0 2 0 1 0 1 0 1 1 0 0 0 1 2 1 0 1 0 0 0 14 0 1492.7158 A0A088AWL3;O75376;E7EVK1 A0A088AWL3 1376 1389 NCOR1 Nuclear receptor corepressor 1 yes no 2 1.8773E-14 130.27 By MS/MS By MS/MS 1 1 10096000 5434800 4660800 173 86 188 421;422 358;359 358 105 2 AQNEFKDEAQSLSHSPK EDLASDVRAQNEFKDE QSLSHSPKRVPTTLSI R A Q P K R 2 0 1 1 0 2 2 0 1 0 1 2 0 1 1 3 0 0 0 0 0 0 17 1 1914.9072 Q8NEN9 Q8NEN9 507 523 PDZD8 PDZ domain-containing protein 8 yes yes 3 0.0014809 70.555 By MS/MS By MS/MS 1 1 2116500 1309100 807400 174 1270 189 423;424 360;361 360 1501;1502 2 AQQELVPPQQQASPPQLPK QGQPGLERAQQELVPP ASPPQLPKAMFSELSN R A Q P K A 2 0 0 0 0 6 1 0 0 0 2 1 0 0 5 1 0 0 0 1 0 0 19 0 2083.1062 F1T0I1;J3KNL6;O15027 F1T0I1 1057 1075 SEC16A Protein transport protein Sec16A yes no 3 0.0054293 47.754 By MS/MS By MS/MS 1 1 3530200 1880600 1649600 175 478 190 425;426 362;363 362 564 2 AQSLVISPPAPSPR SEIHVEVKAQSLVISP SPPAPSPRKTPVASDQ K A Q P R K 2 1 0 0 0 1 0 0 0 1 1 0 0 0 4 3 0 0 0 1 0 0 14 0 1418.7882 P46013 P46013 573 586 MKI67 Antigen KI-67 yes yes 2 1.1122E-13 115.31 By MS/MS By MS/MS 1 1 4346300 2213600 2132700 176 964 191 427;428 364;365 365 1087 2 AQSSPASATFPVSVQEPPTKPR GGHRPLSRAQSSPASA QEPPTKPRFTTGLVYD R A Q P R F 3 1 0 0 0 2 1 0 0 0 0 1 0 1 5 4 2 0 0 2 0 0 22 1 2281.1703 P56524 P56524 630 651 HDAC4 Histone deacetylase 4 yes yes 3 0.0079696 45.328 By MS/MS By matching 1 1 2009400 1279600 729760 177 1012 192 429;430 366 366 1159 1 AQSTDSLGTSGSLQSK MFKDGLRRAQSTDSLG TSGSLQSKALGYNYKA R A Q S K A 1 0 0 1 0 2 0 2 0 0 2 1 0 0 0 5 2 0 0 0 0 0 16 0 1565.7533 Q15276;I3L456 Q15276 405 420 RABEP1 Rab GTPase-binding effector protein 1 yes no 2 0.0098782 58.04 By matching By MS/MS 1 1 2647200 1546300 1100900 178 1121 193 431;432 367 367 2159 1 AQSYDIQAWK PRRRLRNRAQSYDIQA SYDIQAWKKQCEELLN R A Q W K K 2 0 0 1 0 2 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 10 0 1208.5826 Q8WWQ0 Q8WWQ0 1313 1322 PHIP PH-interacting protein yes yes 2 0.0089691 63.966 By matching By MS/MS 1 1 1808500 948930 859590 179 1292 194 433;434 368 368 1524 1 AQTAPTKTSPR CVGGKRGRAQTAPTKT APTKTSPRNAKKHDEL R A Q P R N 2 1 0 0 0 1 0 0 0 0 0 1 0 0 2 1 3 0 0 0 0 0 11 1 1156.62 Q14669 Q14669 1419 1429 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 3 0.0067679 66.56 By matching By MS/MS 1 1 1536300 762390 773940 180 1103 195 435;436 369 369 1277;2154 1 AQTLPTSVVTITSESSPGKR QSTPASSRAQTLPTSV SESSPGKREKDKEKDK R A Q K R E 1 1 0 0 0 1 1 1 0 1 1 1 0 0 2 4 4 0 0 2 0 0 20 1 2058.0957 A0A087WUZ3;Q01082 A0A087WUZ3 2328 2347 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 3 4.1342E-28 120.32 By MS/MS By MS/MS 2 2 21560000 13705000 7854500 181 32 196;197 437;438;439;440 370;371;372 371 34;35;36;1894;1895 3 AQTPPGPSLSGSKSPCPQEK ISPYPKVKAQTPPGPS KSPCPQEKSKDSLVQS K A Q E K S 1 0 0 0 1 2 1 2 0 0 1 2 0 0 5 4 1 0 0 0 0 0 20 1 2051.9946 Q9UQ35 Q9UQ35 1001 1020 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0012168 60.104 By MS/MS By MS/MS 2 2 19298000 12239000 7059400 182 1487 198;199 441;442;443;444 373;374;375 374 1800;1801;2232 3 ARGDSEALDEES SDRQERERARGDSEAL SEALDEES________ R A R E S - 2 1 0 2 0 0 3 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 12 1 1277.5372 Q7Z4V5;A0A087WZ99 Q7Z4V5 660 671 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 2 0.0064977 69.92 By MS/MS By MS/MS 1 1 6944000 3831300 3112700 183 1221 200 445;446 376;377 377 1431 2 ARMMERMSLK EELEKIEKARMMERMS MMERMSLKHQNSGKWA K A R L K H 1 2 0 0 0 0 1 0 0 0 1 1 3 0 0 1 0 0 0 0 0 0 10 2 1251.625 X6RJY0;Q9BVJ6 X6RJY0 121 130 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 0.0069586 52.482 By MS/MS By MS/MS 1 1 577430 319040 258400 184 1370 201 447;448 378;379 378 239;240 2 ARSPTDDKVK RSQEKIGKARSPTDDK SPTDDKVKIEDKSKSK K A R V K I 1 1 0 2 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 2 1115.5935 Q13523 Q13523 255 264 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 3 0.010103 67.019 By matching By MS/MS 1 1 5766800 2449200 3317600 185 1085 202 449;450 380 380 1252 1 ARVGGSDEEASGIPSR KSLEGMKKARVGGSDE EASGIPSRTASLELDL K A R S R T 2 2 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 16 1 1586.7649 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 H7C446 114 129 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2;3 0.0012937 60.602 By MS/MS By matching 2 1 8810500 6823500 1987000 186 134 203 451;452;453 381;382 382 165 2 ASAGTPSLSAGVSPK RRRGRRKRASAGTPSL LSAGVSPKRRALPSVA R A S P K R 3 0 0 0 0 0 0 2 0 0 1 1 0 0 2 4 1 0 0 1 0 0 15 0 1328.6936 Q8TEK3 Q8TEK3 1092 1106 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 5.3065E-17 134.88 By MS/MS By matching 1 1 2463500 1198500 1265100 187 1285 204 454;455 383 383 1519 1 ASAPSPNAQVACDHCLK DVWTPPARASAPSPNA VACDHCLKEAAVKTCL R A S L K E 4 0 1 1 2 1 0 0 1 0 1 1 0 0 2 2 0 0 0 1 0 0 17 0 1824.8247 Q14258 Q14258 96 112 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.0015472 57.197 By MS/MS By MS/MS 1 1 3913600 2182300 1731400 188 1099 205 456;457 384;385 385 1273 2 ASAVSELSPR YGTGSASRASAVSELS AVSELSPRERSPALKS R A S P R E 2 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1015.5298 Q9Y2W1 Q9Y2W1 236 245 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 2.2546E-46 166.24 By MS/MS By MS/MS 1 1 75404000 40644000 34760000 189 1501 206 458;459 386;387;388 386 1835 3 ASEDTTSGSPPKK KVEIGQKRASEDTTSG TSGSPPKKSSAGPKRD R A S K K S 1 0 0 1 0 0 1 1 0 0 0 2 0 0 2 3 2 0 0 0 0 0 13 1 1303.6256 H0YER7;G3V1C3;Q9BZZ5 H0YER7 271 283 API5 Apoptosis inhibitor 5 yes no 2 1.571E-114 183.28 By matching By MS/MS 1 1 73716000 43636000 30080000 190 548 207 460;461 389 389 644 1 ASEGLDACASPTK EAPLGEMRASEGLDAC DACASPTKSASACNRL R A S T K S 3 0 0 1 1 0 1 1 0 0 1 1 0 0 1 2 1 0 0 0 0 0 13 0 1305.5871 Q92618 Q92618 107 119 ZNF516 Zinc finger protein 516 yes yes 2 0.012529 51.03 By matching By MS/MS 1 1 1174500 568820 605680 191 1304 208 462;463 390 390 1 ASEYKEFIQK GEELPLDRASEYKEFI EYKEFIQKIISMLQDA R A S Q K I 1 0 0 0 0 1 2 0 0 1 0 2 0 1 0 1 0 0 1 0 0 0 10 1 1241.6292 P0C671 P0C671 386 395 C6orf222 Uncharacterized protein C6orf222 yes yes 3 0.017484 48.091 By MS/MS By matching 1 1 1194100 1051800 142390 192 877 209 464;465 391 391 2396 0 ASGDPGASGMSPR GGGGRGGKASGDPGAS GASGMSPRASPLPPPP K A S P R A 2 1 0 1 0 0 0 3 0 0 0 0 1 0 2 3 0 0 0 0 0 0 13 0 1188.5193 Q8NDT2 Q8NDT2 99 111 RBM15B Putative RNA-binding protein 15B yes yes 2 0.010433 53.038 By matching By MS/MS 1 1 852810 414430 438380 193 1268 210 466;467 392 392 1499 1 ASGKTSQVGAASAPAKESPR AKALLQAKASGKTSQV APAKESPRKGAAPAPP K A S P R K 5 1 0 0 0 1 1 2 0 0 0 2 0 0 2 4 1 0 0 1 0 0 20 2 1898.981 J3KQ96;E7ETY2;Q13428 J3KQ96 364 383 TCOF1 Treacle protein yes no 3 1.8354E-10 91.733 By matching By MS/MS 1 1 2185900 610930 1575000 194 422 211 468;469 393 393 480 1 ASGPPVSELITK SAGAAKRKASGPPVSE PVSELITKAVAASKER K A S T K A 1 0 0 0 0 0 1 1 0 1 1 1 0 0 2 2 1 0 0 1 0 0 12 0 1197.6605 P10412;P16403;P16402 P10412 35 46 HIST1H1E;HIST1H1C;HIST1H1D Histone H1.4;Histone H1.2;Histone H1.3 yes no 2 0.0024997 81.525 By MS/MS By matching 1 1 1322900 990350 332550 195 881 212 470;471 394 394 1 ASGQAFELILSPR QVKELEKRASGQAFEL FELILSPRSKESVPEF R A S P R S 2 1 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 13 0 1387.746 A2A2D0;P16949 A2A2D0 15 27 STMN1 Stathmin yes no 2;3 0 238.83 By MS/MS By MS/MS 6 5 75618000 41788000 33829000 196 223 213;214 472;473;474;475;476;477;478;479;480;481;482 395;396;397;398;399;400;401;402;403;404;405;406;407;408;409 403 275;276 15 ASGVAVSDGVIK ________________ AVSDGVIKVFNDMKVR M A S I K V 2 0 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 0 0 3 0 0 12 0 1101.603 E9PP50;P23528;E9PS23 E9PP50 2 13 CFL1 Cofilin-1 yes no 2 0.0020851 73.881 By MS/MS By MS/MS 1 1 2601500 1342800 1258600 197 471 215 483;484 410;411 411 558 2 ASLEAAIADAEQR IEGLKGQRASLEAAIA AIADAEQRGELAIKDA R A S Q R G 5 1 0 1 0 1 2 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 13 0 1343.6681 CON__H-INV:HIT000292931;CON__P05787;P05787 CON__H-INV:HIT000292931 289 301 KRT8 Keratin, type II cytoskeletal 8 yes no 2 0.012985 56.043 By MS/MS 1 306650 306650 0 + 198 349 216 485 412 412 1 ASMSEFLESEDGEVEQQR VCRPKRTKASMSEFLE DGEVEQQRTYSSGHNR K A S Q R T 1 1 0 1 0 2 5 1 0 0 1 0 1 1 0 3 0 0 0 1 0 0 18 0 2069.8848 J3QQW9;Q15022 J3QQW9 515 532 SUZ12 Polycomb protein SUZ12 yes no 2 0.0020504 73.273 By MS/MS 1 3455700 3455700 0 199 715 217 486 413 413 840 1 ASPESRRLGSQGGASQNTR TLLVAKTKASPESRRL GGASQNTREWLWGHTD K A S T R E 2 3 1 0 0 2 1 3 0 0 1 0 0 0 1 4 1 0 0 0 0 0 19 2 1957.9678 J3KP49 J3KP49 98 116 FICD yes yes 3 0.0040438 44.998 By MS/MS By matching 1 1 1016100 310550 705520 200 702 218 487;488 414 414 829;2063 1 ASRVPSSDEEVVEEPQSR FQDSTEPRASRVPSSD VVEEPQSRRTRMSLGT R A S S R R 1 2 0 1 0 1 4 0 0 0 0 0 0 0 2 4 0 0 0 3 0 0 18 1 1999.9447 Q9C0C2 Q9C0C2 1615 1632 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 0.0011547 76.744 By MS/MS By MS/MS 1 1 3751900 2115500 1636400 201 1385 219 489;490 415;416 415 1656;1657 2 ASSFSGISILTR SMRPPVTKASSFSGIS SGISILTRGDSIGSSK K A S T R G 1 1 0 0 0 0 0 1 0 2 1 0 0 1 0 4 1 0 0 0 0 0 12 0 1237.6667 H7C0E9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H0YIX9 H7C0E9 112 123 R3HDM2 R3H domain-containing protein 2 yes no 2 0.006455 61.212 By MS/MS By matching 1 1 2331900 1514200 817620 202 201 220 491;492 417 417 250 1 ASSHSSQTQGGGSVTK TSQRSRGRASSHSSQT QGGGSVTKKRKLESTE R A S T K K 1 0 0 0 0 2 0 3 1 0 0 1 0 0 0 5 2 0 0 1 0 0 16 0 1517.707 A0A0C4DGC5;Q3BDU5;Q5TCI8;P02545 A0A0C4DGC5 28 43 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0099794 43.764 By MS/MS 1 2156600 2156600 0 203 153 221 493 418 418 191;192;193;194 1 ASSLEDLVLK PCSAPLARASSLEDLV SLEDLVLKEASTAVST R A S L K E 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 10 0 1073.5968 Q15477 Q15477 254 263 SKIV2L Helicase SKI2W yes yes 2 3.7177E-11 146.71 By MS/MS By MS/MS 1 1 18998000 10195000 8803100 204 1125 222 494;495 419;420 419 1310 2 ASSLGEIDESSELR EPPPAPPRASSLGEID IDESSELRVLDIPGQD R A S L R V 1 1 0 1 0 0 3 1 0 1 2 0 0 0 0 4 0 0 0 0 0 0 14 0 1491.7053 Q16513 Q16513 581 594 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.0012374 80.507 By MS/MS By MS/MS 1 1 32771000 16965000 15806000 205 1136 223 496;497 421;422;423 422 1326 3 ASSLNENVDHSALLK GVRLSLPRASSLNENV VDHSALLKLGTSVSER R A S L K L 2 0 2 1 0 0 1 0 1 0 3 1 0 0 0 3 0 0 0 1 0 0 15 0 1596.8107 D3DTX6;Q96SB3 D3DTX6 98 112 PPP1R9B Neurabin-2 yes no 2 0.0014805 65.472 By MS/MS 1 3278000 3278000 0 206 360 224 498 424 424 421 1 ASSLNFLNK PPNPRMKRASSLNFLN SSLNFLNKSVEEPTQP R A S N K S 1 0 2 0 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 9 0 992.5291 Q9H0B6;A8MZ87 Q9H0B6 580 588 KLC2 Kinesin light chain 2 yes no 2 5.0354E-05 102.06 By matching By MS/MS 1 1 15703000 8998400 6704800 207 1389 225 499;500 425 425 1666 1 ASSLSESSPPK KPLSPDSRASSLSESS LSESSPPKAMKFQAPA R A S P K A 1 0 0 0 0 0 1 0 0 0 1 1 0 0 2 5 0 0 0 0 0 0 11 0 1088.535 F8VS07;F8VQE1;Q9UHB6;F8VRN8 F8VS07 65 75 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.0028956 72.243 By MS/MS By MS/MS 1 1 1661400 901120 760330 208 511 226 501;502 426;427;428;429 426 602 4 ASSPAQCVTPVQTVV RSTSSSERASSPAQCV VTPVQTVV________ R A S V V - 2 0 0 0 1 2 0 0 0 0 0 0 0 0 2 2 2 0 0 4 0 0 15 0 1542.7712 Q13614 Q13614 629 643 MTMR2 Myotubularin-related protein 2 yes yes 2 0.0017686 59.864 By matching By MS/MS 1 1 2024700 1226900 797770 209 1090 227 503;504 430 430 1258 1 ASSPPDRIDIFGR RRERDRERASSPPDRI DRIDIFGRTVSKRSSL R A S G R T 1 2 0 2 0 0 0 1 0 2 0 0 0 1 2 2 0 0 0 0 0 0 13 1 1429.7314 Q9NWB6 Q9NWB6 75 87 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 2;3 0.0081525 61.353 By MS/MS By MS/MS 2 2 31026000 16995000 14031000 210 1432 228 505;506;507;508 431;432;433 432 1737;1738 3 ASSVGVLSPQKK SEGSMKVKASSVGVLS GVLSPQKKSPPTTMLL K A S K K S 1 0 0 0 0 1 0 1 0 0 1 2 0 0 1 3 0 0 0 2 0 0 12 1 1199.6874 Q9UGU5 Q9UGU5 490 501 HMGXB4 HMG domain-containing protein 4 yes yes 2 1.6852E-08 112.02 By MS/MS By MS/MS 1 1 4732700 2855500 1877200 211 1456 229 509;510 434;435 434 1761 2 ASSVSTKESPAR SVKPAQVKASSVSTKE STKESPARKAAPAPGK K A S A R K 2 1 0 0 0 0 1 0 0 0 0 1 0 0 1 4 1 0 0 1 0 0 12 1 1218.6204 J3KQ96;E7ETY2;Q13428 J3KQ96 225 236 TCOF1 Treacle protein yes no 2;3 6.1822E-06 105.58 By MS/MS By MS/MS 2 2 16453000 9077300 7375400 212 422 230 511;512;513;514 436;437;438 436 481 3 ASTSDYQVISDRQTPK RPLATAYKASTSDYQV ISDRQTPKKDESLVSK K A S P K K 1 1 0 2 0 2 0 0 0 1 0 1 0 0 1 3 2 0 1 1 0 0 16 1 1794.8748 Q8NFH5 Q8NFH5 295 310 NUP35 Nucleoporin NUP53 yes yes 3 4.9198E-07 73.918 By MS/MS By MS/MS 1 1 2196000 1165100 1030900 213 1272 231 515;516 439;440 439 2195 1 ASTVGEIVNLMSVDAQR VITNSVKRASTVGEIV LMSVDAQRFMDLAPFL R A S Q R F 2 1 1 1 0 1 1 1 0 1 1 0 1 0 0 2 1 0 0 3 0 0 17 0 1788.904 O15438 O15438 403 419 ABCC3 Canalicular multispecific organic anion transporter 2 yes yes 3 0.012146 40.801 By matching By MS/MS 1 1 1072800 615880 456930 214 772 232 517;518 441 441 899 1 ASVTGYLLVYESVDGTVK LLTWRPPRASVTGYLL ESVDGTVKEVIVGPDT R A S V K E 1 0 0 1 0 0 1 2 0 0 2 1 0 0 0 2 2 0 2 4 0 0 18 0 1899.983 F5H7V9;E9PC84;J3QSU6;P24821;H0YGZ3 F5H7V9 1549 1566 TNC Tenascin yes no 2 2.5843E-37 137.09 By MS/MS By MS/MS 1 1 20851000 6718700 14132000 215 435 233 519;520 442;443;444;445 445 4 ATADDELSFK AIAKYDFKATADDELS ADDELSFKRGDILKVL K A T F K R 2 0 0 2 0 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 10 0 1095.5084 P62993;J3KT38;J3QRL5 P62993 11 20 GRB2 Growth factor receptor-bound protein 2 yes no 2 1.9768E-05 102.62 By MS/MS By matching 1 1 11736000 10788000 947860 216 1028 234 521;522 446 446 1 ATAGDTHLGGEDFDNR DDGIFEVKATAGDTHL GGEDFDNRLVNHFVEE K A T N R L 2 1 1 3 0 0 1 3 1 0 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1674.7234 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 222 237 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 3 0.00058274 66.387 By MS/MS By MS/MS 1 1 3541100 2149000 1392100 217 176 235 523;524 447;448 447 2 ATAPQTQHVSPMR EKSSPGHRATAPQTQH TQHVSPMRQVEPPAKK R A T M R Q 2 1 0 0 0 2 0 0 1 0 0 0 1 0 2 1 2 0 0 1 0 0 13 0 1422.7038 E9PL71;E9PQ49;E9PI39;E9PQZ1;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PK06;E9PPR1;E9PL12 E9PL71 100 112 EEF1D Elongation factor 1-delta yes no 2;3 9.1671E-10 113.65 By MS/MS By MS/MS 3 3 117660000 57397000 60268000 218 78 236;237 525;526;527;528;529;530 449;450;451;452;453 453 11 91 3 ATISDEEIER LPSASTSKATISDEEI ISDEEIERQLKALGVD K A T E R Q 1 1 0 1 0 0 3 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 10 0 1161.5513 C9J0A7;Q9UQN3 C9J0A7 166 175 CHMP2B Charged multivesicular body protein 2b yes no 2 0.00017 96.604 By MS/MS By matching 1 1 42522000 23530000 18992000 219 311 238 531;532 454 454 371 1 ATNESEDEIPQLVPIGK GRGKAQVKATNESEDE PQLVPIGKKTPANEKV K A T G K K 1 0 1 1 0 1 3 1 0 2 1 1 0 0 2 1 1 0 0 1 0 0 17 0 1838.9262 O76021;J3QSV6 O76021 357 373 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.00057343 83.751 By MS/MS By MS/MS 1 2 84772000 46546000 38226000 220 804 239 533;534;535 455;456;457;458 456 947;2087 4 ATSACAPISSPK VPGKRPPRATSACAPI CAPISSPKTNGLSKDM R A T P K T 3 0 0 0 1 0 0 0 0 1 0 1 0 0 2 3 1 0 0 0 0 0 12 0 1188.5809 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C211 A0A087X1U1 359 370 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.0061331 62.042 By MS/MS 1 881860 0 881860 221 76 240 536 459 459 88 1 ATSDTLESPPKIIPK RQTRSKRKATSDTLES SPPKIIPKYISENESP K A T P K Y 1 0 0 1 0 0 1 0 0 2 1 2 0 0 3 2 2 0 0 0 0 0 15 1 1595.877 O94782 O94782 306 320 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 2 0.0026452 66.56 By MS/MS By matching 1 1 1983800 1126900 856920 222 807 241 537;538 460 460 952 1 ATSEEDVSIKSPICEK ENQSHDYKATSEEDVS IKSPICEKQDESNTVI K A T E K Q 1 0 0 1 1 0 3 0 0 2 0 2 0 0 1 3 1 0 0 1 0 0 16 1 1791.856 Q5UIP0 Q5UIP0 1606 1621 RIF1 Telomere-associated protein RIF1 yes yes 3 0.017849 42.711 By MS/MS By matching 1 1 1308600 834390 474160 223 1174 242 539;540 461 461 1 ATVTPSPVK KMPKPRLKATVTPSPV TVTPSPVKGKGKVGRP K A T V K G 1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 1 2 0 0 2 0 0 9 0 898.51238 Q9H1E3 Q9H1E3 176 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 8.4464E-95 187.16 By MS/MS By MS/MS 2 2 191030000 106600000 84426000 224 1393 243;244 541;542;543;544 462;463;464;465;466;467;468 463 1674;2217;2218 7 ATVTPSPVKGK KMPKPRLKATVTPSPV TPSPVKGKGKVGRPTA K A T G K G 1 0 0 0 0 0 0 1 0 0 0 2 0 0 2 1 2 0 0 2 0 0 11 1 1083.6288 Q9H1E3 Q9H1E3 176 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 3.6063E-86 182.41 By MS/MS By MS/MS 3 2 161820000 83176000 78641000 225 1393 245;246 545;546;547;548;549 469;470;471;472;473;474;475;476;477;478;479 470 1674;2217;2218 11 ATYINLKPAR NPEAEEMKATYINLKP YINLKPARKYRFH___ K A T A R K 2 1 1 0 0 0 0 0 0 1 1 1 0 0 1 0 1 0 1 0 0 0 10 1 1145.6557 Q9H467 Q9H467 273 282 CUEDC2 CUE domain-containing protein 2 yes yes 2 0.011822 63.076 By MS/MS By matching 1 1 1277300 737200 540090 226 1398 247 550;551 480 480 2497 1 AVAFQDCPVDLFFVLDTSESVALR QDEPETPRAVAFQDCP TSESVALRLKPYGALV R A V L R L 3 1 0 3 1 1 1 0 0 0 3 0 0 3 1 2 1 0 0 4 0 0 24 0 2698.3313 A0A087X0S5;P12109 A0A087X0S5 28 51 COL6A1 Collagen alpha-1(VI) chain yes no 3 0.00014515 56.404 By MS/MS 1 601990 601990 0 227 74 248 552 481 481 0 AVAGVMITASHNR PYAVQKLKAVAGVMIT MITASHNRKEDNGYKV K A V N R K 3 1 1 0 0 0 0 1 1 1 0 0 1 0 0 1 1 0 0 2 0 0 13 0 1325.6874 Q6PCE3 Q6PCE3 166 178 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 2;3 1.6261E-09 110.25 By MS/MS By MS/MS 3 2 6118200 3682700 2435500 228 1198 249;250 553;554;555;556;557 482;483;484;485 485 216 1404;2182 4 AVCMLSNTTAIAEAWAR GDLAKVQRAVCMLSNT AIAEAWARLDHKFDLM R A V A R L 5 1 1 0 1 0 1 0 0 1 1 0 1 0 0 1 2 1 0 1 0 0 17 0 1863.8971 Q71U36;P68363;Q6PEY2;Q13748;V9GZ17;C9J2C0;P68366;Q9NY65 Q71U36 374 390 TUBA1A;TUBA1B;TUBA3E;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain;Tubulin alpha-4A chain;Tubulin alpha-8 chain yes no 2 0.0029898 66.498 By MS/MS By MS/MS 2 2 3143100 2319800 823360 229 1030 251;252 558;559;560;561 486;487 487 187 2 AVFVDLEPTVIDEVR GAGKHVPRAVFVDLEP PTVIDEVRTGTYRQLF R A V V R T 1 1 0 2 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 4 0 0 15 0 1700.8985 Q71U36;P68363;F5H5D3;Q9BQE3;F8VRZ4;F8VS66;F8VQQ4;F8VVB9;F8VRK0;F8VX09;F8VWV9 Q71U36 65 79 TUBA1A;TUBA1B;TUBA1C Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-1C chain yes no 2 4.028E-27 146.16 By MS/MS By MS/MS 1 1 24412000 14128000 10283000 230 1030 253 562;563 488;489 488 2 AVGMPSPVSPK PSPGLGSKAVGMPSPV MPSPVSPKLSPGNSGN K A V P K L 1 0 0 0 0 0 0 1 0 0 0 1 1 0 3 2 0 0 0 2 0 0 11 0 1068.5638 Q9UHB7 Q9UHB7 1050 1060 AFF4 AF4/FMR2 family member 4 yes yes 2 0.0016126 76.522 By matching By MS/MS 1 2 1730100 294870 1435200 231 1457 254;255 564;565;566 490;491 491 1762;1763 2 AVIVSSPK SSSKPSIKAVIVSSPK AVIVSSPKAKATVSKT K A V P K A 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 2 0 0 0 2 0 0 8 0 799.48035 Q14966 Q14966 1396 1403 ZNF638 Zinc finger protein 638 yes yes 2 0.011379 117.31 By MS/MS By MS/MS 1 1 2992300 1627000 1365400 232 1110 256 567;568 492;493;494;495 495 1292;1293 4 AVLASQTSLTPLGR LSNLSERRAVLASQTS TSLTPLGRNGRSIPAT R A V G R N 2 1 0 0 0 1 0 1 0 0 3 0 0 0 1 2 2 0 0 1 0 0 14 0 1412.7987 E7EPP7;Q6ZWJ1 E7EPP7 434 447 STXBP4 Syntaxin-binding protein 4 yes no 2 0.0020293 70.373 By matching By MS/MS 1 1 1716800 733100 983710 233 408 257 569;570 496 496 461 1 AVLSDSPQLSEGK HLVEEVARAVLSDSPQ SPQLSEGKEIKLEELI R A V G K E 1 0 0 1 0 1 1 1 0 0 2 1 0 0 1 3 0 0 0 1 0 0 13 0 1329.6776 Q5SYF9;Q5VY60;Q7Z4H7 Q5SYF9 63 75 HAUS6 HAUS augmin-like complex subunit 6 yes no 2 0.00033868 90.759 By MS/MS By MS/MS 1 1 2997400 1396200 1601200 234 1165 258 571;572 497;498 497 1362 2 AVLYADYR HEDRPSSRAVLYADYR AVLYADYRAPGPARFD R A V Y R A 2 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 8 0 969.49198 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 433 440 KIRREL Kin of IRRE-like protein 1 yes no 2 0.018882 46.994 By MS/MS 1 316750 0 316750 235 265 259 573 499 499 2297;2298 1 AVMDDFAAFVEK KATKEQLKAVMDDFAA DFAAFVEKCCKADDKE K A V E K C 3 0 0 2 0 0 1 0 0 0 0 1 1 2 0 0 0 0 0 2 0 0 12 0 1341.6275 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 570 581 ALB Serum albumin yes no 2 0.0007551 87.298 By MS/MS By MS/MS 3 3 6937500 4146400 2791100 + 236 152 260;261 574;575;576;577;578;579 500;501;502;503 500 21 4 AVNTQALSGAGILR LESSELPRAVNTQALS LSGAGILRMVNKAADA R A V L R M 3 1 1 0 0 1 0 2 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1369.7678 O60749 O60749 270 283 SNX2 Sorting nexin-2 yes yes 2 0.0024327 67.115 By MS/MS 1 390610 390610 0 237 791 262 580 504 504 927 1 AVPLTVAKSQFSRSSK NKVYLSGKAVPLTVAK SQFSRSSKAHNQKMKL K A V S K A 2 1 0 0 0 1 0 0 0 0 1 2 0 1 1 4 1 0 0 2 0 0 16 2 1704.9523 Q96GM8 Q96GM8 482 497 TOE1 Target of EGR1 protein 1 yes yes 3 0.013179 45.704 By matching By MS/MS 1 1 4004400 1801500 2202900 238 1331 263 581;582 505 505 1 AVPMAPAPASPGSSNDSSAR PCEFEHRKAVPMAPAP SSNDSSARSQERAGGL K A V A R S 5 1 1 1 0 0 0 1 0 0 0 0 1 0 4 5 0 0 0 1 0 0 20 0 1868.8687 Q66K74 Q66K74 750 769 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3 0.00346 50.252 By MS/MS 1 828410 0 828410 239 1182 264 583 506 506 1390 1 AVPPVSPELR TLSPEHWKAVPPVSPE PPVSPELRKPGPPLSP K A V L R K 1 1 0 0 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 0 1063.6026 Q96JM3 Q96JM3 411 420 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0034785 70.942 By MS/MS By MS/MS 2 2 3453600 2432600 1021000 240 1338 265 584;585;586;587 507;508;509;510 509 1578 4 AVPSPTTGEEGSVHSR ENVSEALRAVPSPTTG EEGSVHSREAKESSAA R A V S R E 1 1 0 0 0 0 2 2 1 0 0 0 0 0 2 3 2 0 0 2 0 0 16 0 1609.7696 Q5SYE7 Q5SYE7 1230 1245 NHSL1 NHS-like protein 1 yes yes 3 0.0011077 58.658 By matching By MS/MS 1 1 2718600 1377700 1340800 241 1164 266 588;589 511 511 1361 1 AVSPAPQSSSR TWPVHRARAVSPAPQS PAPQSSSRLQPPFSPH R A V S R L 2 1 0 0 0 1 0 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 11 0 1085.5465 A0A075B784;Q9P275 A0A075B784 740 750 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.011451 66.92 By MS/MS 1 2585400 2585400 0 242 10 267 590 512;513 512 5 2 AVSVPASFFR PRGRRSRRAVSVPASF SVPASFFRRLAPSPAR R A V F R R 2 1 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 0 2 0 0 10 0 1079.5764 O14654 O14654 425 434 IRS4 Insulin receptor substrate 4 yes yes 2 1.3077E-05 107.06 By MS/MS By MS/MS 1 1 5394500 3171500 2223000 243 761 268 591;592 514;515;516;517;518;519;520 519 888 7 AVTAVTATAASDR ________________ TATAASDRMESDSDSD M A V D R M 5 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 2 0 0 13 0 1232.6361 K7EQ06;K7EJP7 K7EQ06 2 14 HDGFRP2 yes no 2 0.0043828 62.68 By matching By MS/MS 1 1 762710 462520 300190 244 725 269 593;594 521 521 847 1 AVTEQGAELSNEER DDMATCMKAVTEQGAE AELSNEERNLLSVAYK K A V E R N 2 1 1 0 0 1 4 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 14 0 1531.7114 P27348;E9PG15 P27348 28 41 YWHAQ 14-3-3 protein theta yes no 2 3.2598E-13 117.09 By MS/MS By MS/MS 1 1 1888300 1203100 685200 245 933 270 595;596 522;523 523 2 AVTIANSPSKPSEK AKMEHGPKAVTIANSP SPSKPSEKDSVVSLES K A V E K D 2 0 1 0 0 0 1 0 0 1 0 2 0 0 2 3 1 0 0 1 0 0 14 1 1427.762 Q8NEF9 Q8NEF9 197 210 SRFBP1 Serum response factor-binding protein 1 yes yes 2 0.0032268 71.279 By matching By MS/MS 1 1 2842200 1461500 1380700 246 1269 271 597;598 524 524 1500 1 AVTPVPTKTEEVSNLK ESAPGSPRAVTPVPTK TEEVSNLKTLPKGLSA R A V L K T 1 0 1 0 0 0 2 0 0 0 1 2 0 0 2 1 3 0 0 3 0 0 16 1 1711.9356 A0A0B4J210;Q6PKG0;E5RH50;H0YBW1 A0A0B4J210 524 539 LARP1 La-related protein 1 yes no 2;3 0.002588 57.745 By MS/MS By MS/MS 2 2 18978000 10766000 8212400 247 139 272 599;600;601;602 525;526;527 525 1926 3 AVVVSPKEENK SSPRQVKRAVVVSPKE VSPKEENKAAEPPPPK R A V N K A 1 0 1 0 0 0 2 0 0 0 0 2 0 0 1 1 0 0 0 3 0 0 11 1 1198.6558 G3V5E1;O75909 G3V5E1 336 346 CCNK Cyclin-K yes no 2 2.283E-05 128.57 By MS/MS By MS/MS 1 2 5427300 3083700 2343600 248 565 273 603;604;605 528;529;530;531 528 664 3 AYEYVECPIR SVPAHQERAYEYVECP EYVECPIRGTAAENKE R A Y I R G 1 1 0 0 1 0 2 0 0 1 0 0 0 0 1 0 0 0 2 1 0 0 10 0 1298.5965 P53701 P53701 60 69 HCCS Cytochrome c-type heme lyase yes yes 2 0.0098365 66.692 By MS/MS By MS/MS 1 1 491280 251740 239540 249 1006 274 606;607 532;533 532 2432 2 AYLEGLCVEWLR AREAEQWRAYLEGLCV GLCVEWLRRYLENGKE R A Y L R R 1 1 0 0 1 0 2 1 0 0 3 0 0 0 0 0 0 1 1 1 0 0 12 0 1507.7493 A0A140TA13;A0A140T953;P30685;P30498;P30495;P30491;P30490;P30484;P30464;P18465;P18464;P10319;A0A140T9G0;A0A140T9T1;A0A140T9W2;A0A140T9U0;A0A140T9M0;P04222;P30488;P30487 P30488 182 193 HLA-B;HLA-C HLA class I histocompatibility antigen, B-35 alpha chain;HLA class I histocompatibility antigen, B-78 alpha chain;HLA class I histocompatibility antigen, B-56 alpha chain;HLA class I histocompatibility antigen, B-53 alpha chain;HLA class I histocompatibility antigen, B-52 alpha chain;HLA class I histocompatibility antigen, B-46 alpha chain;HLA class I histocompatibility antigen, B-15 alpha chain;HLA class I histocompatibility antigen, B-57 alpha chain;HLA class I histocompatibility antigen, B-51 alpha chain;HLA class I histocompatibility antigen, B-58 alpha chain;HLA class I histocompatibility antigen, Cw-3 alpha chain;HLA class I histocompatibility antigen, B-50 alpha chain;HLA class I histocompatibility antigen, B-49 alpha chain no no 2 0.0017555 83.869 By MS/MS By MS/MS 1 1 2183200 1062900 1120300 250 206;943 275 608;609 534;535 535 2 AYSSFGGGR DFDTYDDRAYSSFGGG YSSFGGGRGSRGSAGG R A Y G R G 1 1 0 0 0 0 0 3 0 0 0 0 0 1 0 2 0 0 1 0 0 0 9 0 900.40898 Q15056 Q15056 11 19 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 0.012105 70.525 By MS/MS By MS/MS 2 2 3304900 1994200 1310700 251 1116 276 610;611;612;613 536;537 537 2456 2 AYTHQVVTR KSFGSPNRAYTHQVVT YTHQVVTRWYRAPELL R A Y T R W 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 1 2 0 0 9 0 1073.5618 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 75 83 CDK7 Cyclin-dependent kinase 7 yes no 2 0.00062876 101.39 By MS/MS By matching 1 1 6040000 3128900 2911100 252 363 277 614;615 538 538 1963 1 CALSSPSLAFTPPIK SVMESSDRCALSSPSL LAFTPPIKTLGTPTQP R C A I K T 2 0 0 0 1 0 0 0 0 1 2 1 0 1 3 3 1 0 0 0 0 0 15 0 1587.8331 Q8NFH5 Q8NFH5 255 269 NUP35 Nucleoporin NUP53 yes yes 2 0.01912 43.958 By MS/MS By matching 1 1 1614100 873870 740210 253 1272 278 616;617 539 539 1 CAPSAGSPAAAVGR GTERGPGRCAPSAGSP SPAAAVGRESPGAAAT R C A G R E 5 1 0 0 1 0 0 2 0 0 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1270.6088 Q7L2J0 Q7L2J0 54 67 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 0.012319 49.482 By MS/MS 1 1368300 0 1368300 254 1215 279 618 540 540 1423 1 CDSSPDSAEDVR QFSVLFTKCDSSPDSA PDSAEDVRKLCPDCPL K C D V R K 1 1 0 3 1 0 1 0 0 0 0 0 0 0 1 3 0 0 0 1 0 0 12 0 1336.5201 CON__P12763;P02765 CON__P12763 132 143 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 2 0.018186 50.088 By MS/MS 1 622590 0 622590 + 255 355 280 619 541 541 419 1 CDSSPDSAEDVRK QFSVLFTKCDSSPDSA DSAEDVRKLCPDCPLL K C D R K L 1 1 0 3 1 0 1 0 0 0 0 1 0 0 1 3 0 0 0 1 0 0 13 1 1464.6151 CON__P12763;P02765 CON__P12763 132 144 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 2 0.0042895 72.815 By MS/MS By MS/MS 1 1 1917200 856970 1060200 + 256 355 281 620;621 542;543 542 419 2 CDVMYGIEDTQDTVSLTVDGVVFHYR ASDAGLYRCDVMYGIE DGVVFHYRAATSRYTL R C D Y R A 0 1 0 4 1 1 1 2 1 1 1 0 1 1 0 1 3 0 2 5 0 0 26 0 3018.3739 Q86W61;D6RGZ6;E9PF17;P13611 Q86W61 130 155 VCAN Versican core protein yes no 3 5.2812E-06 73.994 By MS/MS By MS/MS 1 1 10599000 7132400 3466100 257 380 282 622;623 544;545 544 63 2 CETSASELER FNRDDRGRCETSASEL TSASELERMNPGPGGK R C E E R M 1 1 0 0 1 0 3 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 10 0 1180.503 H3BTQ3;P41440 H3BTQ3 220 229 SLC19A1 Folate transporter 1 yes no 2 0.01133 61.48 By matching By MS/MS 1 1 1422500 771960 650510 258 665 283 624;625 546 546 782 1 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK PPVVLRLKCGSGPVHI DEEEEDVKLLSISGKR K C G V K L 2 0 0 3 1 1 8 3 2 1 1 1 0 0 1 3 0 0 0 4 0 0 31 0 3379.4634 P06748;E5RI98 P06748 104 134 NPM1 Nucleophosmin yes no 4 2.1558E-13 78.978 By MS/MS By MS/MS 1 1 49160000 23605000 25554000 259 861 284 626;627 547;548;549 549 987 3 CIACQAAKLSPR QNKVTDNKCIACQAAK QAAKLSPRDTAKQTGI K C I P R D 3 1 0 0 2 1 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 12 1 1373.6908 P49790 P49790 678 689 NUP153 Nuclear pore complex protein Nup153 yes yes 2;3 0.0012089 89.466 By MS/MS By MS/MS 2 2 10921000 5864000 5057100 260 980 285 628;629;630;631 550;551;552 550 1121 3 CLSPDDSTVK ALGEAEERCLSPDDST SPDDSTVKMASPPPSG R C L V K M 0 0 0 2 1 0 0 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 10 0 1120.507 E9PGC8;P78559 E9PGC8 1222 1231 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.011645 60.641 By matching By MS/MS 1 1 1518700 879260 639430 261 446 286 632;633 553 553 521 1 CLSYGGTSQLR HPPSPPKRCLSYGGTS YGGTSQLRVPEEPAAE R C L L R V 0 1 0 0 1 1 0 2 0 0 2 0 0 0 0 2 1 0 1 0 0 0 11 0 1240.587 H0Y894;O95382 H0Y894 686 696 MAP3K6 Mitogen-activated protein kinase kinase kinase 6 yes no 2 0.0056255 66.989 By matching By MS/MS 1 1 643610 325960 317650 262 600 287 634;635 554;555 555 719 2 CLVAGLLSPR LIPDGYNRCLVAGLLS VAGLLSPRFVDVQPSS R C L P R F 1 1 0 0 1 0 0 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 10 0 1084.6063 Q8WYP5 Q8WYP5 521 530 AHCTF1 Protein ELYS yes yes 2 0.008795 64.121 By MS/MS By matching 1 1 1031200 572510 458730 263 1297 288 636;637 556;557 556 1529 2 CQENGQELSPIALEPGPEPHR QELVPGLRCQENGQEL EPGPEPHRAKQEARNQ R C Q H R A 1 1 1 0 1 2 4 2 1 1 2 0 0 0 4 1 0 0 0 0 0 0 21 0 2357.107 H0YB23;A0A0A0MR08;E7EST9;B5MEG5 H0YB23 14 34 USP19 Ubiquitin carboxyl-terminal hydrolase yes no 3 0.011524 41.908 By matching By MS/MS 1 1 1633100 859000 774090 264 94 289 638;639 558 558 116 1 CRSPGMLEPLGSSR MSPTPLDRCRSPGMLE LEPLGSSRTPMSVLQQ R C R S R T 0 2 0 0 1 0 1 2 0 0 2 0 1 0 2 3 0 0 0 0 0 0 14 1 1545.7392 Q9UQ35 Q9UQ35 2130 2143 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0038729 58.712 By MS/MS By MS/MS 2 3 8434200 4065700 4368500 265 1487 290;291 640;641;642;643;644 559;560;561 561 254 1802 2 CSATPSAQVKPIVSASPPSR VIEMSSSRCSATPSAQ VSASPPSRAVAGSRSS R C S S R A 3 1 0 0 1 1 0 0 0 1 0 1 0 0 4 5 1 0 0 2 0 0 20 1 2039.047 Q96EV2;H0Y3K4 Q96EV2 726 745 RBM33 RNA-binding protein 33 yes no 3 0.0025964 64.768 By MS/MS By MS/MS 1 1 2298500 1421800 876720 266 1330 292 645;646 562;563;564 564 1567;1568 3 CSGPGLSPGMVR VTDASKVKCSGPGLSP GLSPGMVRANLPQSFQ K C S V R A 0 1 0 0 1 0 0 3 0 0 1 0 1 0 2 2 0 0 0 1 0 0 12 0 1216.5693 A0A087WWY3;Q5HY54;Q60FE5;P21333 A0A087WWY3 1426 1437 FLNA Filamin-A yes no 2 1.6825E-08 124.47 By MS/MS By MS/MS 3 3 16471000 8160800 8310500 267 47 293;294 647;648;649;650;651;652 565;566;567;568;569 568 6 57 3 CSTGSPSKDVTK FTSLYKDRCSTGSPSK SPSKDVTKSSSSGARE R C S T K S 0 0 0 1 1 0 0 1 0 0 0 2 0 0 1 3 2 0 0 1 0 0 12 1 1265.5922 H0Y2V6;Q5SW79 H0Y2V6 931 942 CEP170 Centrosomal protein of 170 kDa yes no 2 3.6591E-14 109.6 By MS/MS 1 0 0 0 268 578 295 653 570 570 687 1 CSVSLSNVEAR YRRQNPSRCSVSLSNV SLSNVEARRFFNKEFL R C S A R R 1 1 1 0 1 0 1 0 0 0 1 0 0 0 0 3 0 0 0 2 0 0 11 0 1220.5819 P47712 P47712 726 736 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 2 0.015048 53.947 By matching By MS/MS 1 1 2475800 1379700 1096100 269 970 296 654;655 571 571 1 CTLPEHESPSQDISDACEAESTER PKSEDADRCTLPEHES CEAESTERCEMSEHPS R C T E R C 2 1 0 2 2 1 5 0 1 1 1 0 0 0 2 4 2 0 0 0 0 0 24 0 2747.1287 Q32MZ4 Q32MZ4 726 749 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 3 0.010021 41.904 By matching By MS/MS 1 1 2923400 1805100 1118300 270 1142 297 656;657 572 572 1330 1 CTSHSETPTVDDEEKVDER AERKESDRCTSHSETP DEEKVDERAKLSVAAK R C T E R A 0 1 0 3 1 0 4 0 1 0 0 1 0 0 1 2 3 0 0 2 0 0 19 1 2232.9441 O95425 O95425 671 689 SVIL Supervillin yes yes 3 0.0091994 49.343 By MS/MS By matching 1 1 1398000 717860 680150 271 820 298 658;659 573 573 969;970;2093 1 CVACQNPDKPSPSTSVPAPASFK RNEANATRCVACQNPD VPAPASFKFGTSETSK R C V F K F 3 0 1 1 2 1 0 0 0 0 0 2 0 1 5 4 1 0 0 2 0 0 23 1 2444.1464 P49792 P49792 1563 1585 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 3 0.0097658 45.069 By MS/MS By matching 1 1 2318800 1402100 916770 272 981 299 660;661 574 574 1125;2133 1 CVSVQTDPTDEIPTKK KEGSRKSRCVSVQTDP TDEIPTKKSKKHKKHK R C V K K S 0 0 0 2 1 1 1 0 0 1 0 2 0 0 2 1 3 0 0 2 0 0 16 1 1816.8877 P18583 P18583 92 107 SON Protein SON yes yes 2;3 0.0022772 54.237 By MS/MS By MS/MS 2 2 5214700 3188400 2026300 273 909 300 662;663;664;665 575;576 576 1028;2112 2 CYGGSFAQR EANLVPPKCYGGSFAQ YGGSFAQRNLCNDDGG K C Y Q R N 1 1 0 0 1 1 0 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 9 0 1044.4447 P42684 P42684 717 725 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0084889 73.665 By MS/MS 1 0 0 0 274 961 301 666 577 577 2412 1 DAFLGSFLYEYSR CKNYQEAKDAFLGSFL SFLYEYSRRHPEYAVS K D A S R R 1 1 0 1 0 0 1 1 0 0 2 0 0 2 0 2 0 0 2 0 0 0 13 0 1566.7355 CON__P02769 CON__P02769 347 359 yes yes 2 2.9301E-06 103.21 By matching By MS/MS 1 1 6891400 4655900 2235500 + 275 353 302 667;668 578 578 1 DAGGPRPESPVPAGR ________________ ESPVPAGRASLEEPPD R D A G R A 2 2 0 1 0 0 1 3 0 0 0 0 0 0 4 1 0 0 0 1 0 0 15 1 1461.7324 E9PS47;E9PLE4;Q9BVG9 E9PS47 8 22 PTDSS2 Phosphatidylserine synthase 2 yes no 2;3 0.0010363 72.421 By MS/MS By MS/MS 2 2 15216000 7467700 7747900 276 462 303 669;670;671;672 579;580 580 545 2 DAGTIAGLNVLR AYLGKATKDAGTIAGL IAGLNVLRIINEPTAA K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1198.667 E9PKE3;P11142;E9PN89;E9PI65;E9PQQ4;E9PQK7;E9PK54;E9PLF4 E9PKE3 141 152 HSPA8 Heat shock cognate 71 kDa protein yes no 2 0.0064212 70.399 By MS/MS By matching 1 1 1094000 746350 347660 277 458 304 673;674 581 581 1 DALGDSLQVPVSPSSTTSSR GHSPSQPRDALGDSLQ PSSTTSSRCSSRDGEF R D A S R C 1 1 0 2 0 1 0 1 0 0 2 0 0 0 2 6 2 0 0 2 0 0 20 0 2002.9807 Q9Y2D5;C9JVY5 Q9Y2D5 141 160 AKAP2 A-kinase anchor protein 2 yes no 2 0.00072948 76.713 By MS/MS By MS/MS 1 1 9406600 5573200 3833400 278 1495 305 675;676 582;583 582 1826;1827 2 DAPISPASIASSSSTPSSK DKTRLLKKDAPISPAS SSSTPSSKSKELSLKR K D A S K S 3 0 0 1 0 0 0 0 0 2 0 1 0 0 3 8 1 0 0 0 0 0 19 0 1788.8741 H0Y5S0;H7C4E4;Q04727 H0Y5S0 21 39 TLE4 Transducin-like enhancer protein 4 yes no 2 0.012284 45.876 By matching By MS/MS 1 1 4410000 2395000 2015000 279 592 306 677;678 584 584 711 1 DAPTSPASVASSSSTPSSK DKARSLKKDAPTSPAS SSSTPSSKTKDLGHND K D A S K T 3 0 0 1 0 0 0 0 0 0 0 1 0 0 3 8 2 0 0 1 0 0 19 0 1762.8221 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 282 300 TLE3 Transducin-like enhancer protein 3 yes no 2 0.00012766 79.332 By MS/MS By MS/MS 1 1 13388000 7369500 6018800 280 505 307 679;680 585;586 585 594 2 DASGVTFTWTPSSGK TCTLTGLRDASGVTFT TWTPSSGKSAVQGPPE R D A G K S 1 0 0 1 0 0 0 2 0 0 0 1 0 1 1 3 3 1 0 1 0 0 15 0 1539.7205 P01876 P01876 154 168 IGHA1 Ig alpha-1 chain C region yes yes 2 2.9449E-08 105.2 By MS/MS By matching 1 1 1789900 1308500 481460 281 841 308 681;682 587 587 1 DASIVGFFDDSFSEAHSEFLK FKKFISDKDASIVGFF EAHSEFLKAASNLRDN K D A L K A 2 0 0 3 0 0 2 1 1 1 1 1 0 4 0 4 0 0 0 1 0 0 21 0 2347.0645 P30101 P30101 153 173 PDIA3 Protein disulfide-isomerase A3 yes yes 3 1.6833E-36 148.26 By MS/MS By MS/MS 1 1 8656700 4928500 3728100 282 942 309 683;684 588;589;590 589 3 DATNVGDEGGFAPNILENK VIKEKYGKDATNVGDE APNILENKEGLELLKT K D A N K E 2 0 3 2 0 0 2 3 0 1 1 1 0 1 1 0 1 0 0 1 0 0 19 0 1959.9174 P06733 P06733 203 221 ENO1 Alpha-enolase yes yes 2;3 0.0046048 64.313 By MS/MS By matching 2 1 13367000 8201000 5165600 283 860 310 685;686;687 591;592 591 2 DDGSWEVIEGYR SLSFPIRRDDGSWEVI WEVIEGYRAQHSQHRT R D D Y R A 0 1 0 2 0 0 2 2 0 1 0 0 0 0 0 1 0 1 1 1 0 0 12 0 1424.6208 P49448;P00367 P49448 125 136 GLUD2;GLUD1 Glutamate dehydrogenase 2, mitochondrial;Glutamate dehydrogenase 1, mitochondrial yes no 2 0.007711 68.893 By MS/MS By matching 1 1 706010 384770 321240 284 830 311 688;689 593 593 1 DDKHGSYEDAVHSGALND IKLHPESKDDKHGSYE VHSGALND________ K D D N D - 2 0 1 4 0 0 1 2 2 0 1 1 0 0 0 2 0 0 1 1 0 0 18 1 1928.8137 F5H282;E7EQR6;P17987 F5H282 315 332 TCP1 T-complex protein 1 subunit alpha yes no 3 0.0017233 71.354 By MS/MS By MS/MS 1 1 5012900 3054700 1958200 285 411 312 690;691 594;595 595 463 2 DDSHSAEDSEDEKEDHK DKDVKTKKDDSHSAED EDEKEDHKNVRQQRQA K D D H K N 1 0 0 5 0 0 4 0 2 0 0 2 0 0 0 3 0 0 0 0 0 0 17 1 1971.7566 Q9H1E3 Q9H1E3 71 87 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0022883 57.366 By MS/MS 1 3465400 0 3465400 286 1393 313 692 596 596 1675 1 DDSHSAEDSEDEKEDHKNVR DKDVKTKKDDSHSAED KEDHKNVRQQRQAASK K D D V R Q 1 1 1 5 0 0 4 0 2 0 0 2 0 0 0 3 0 0 0 1 0 0 20 2 2340.9691 Q9H1E3 Q9H1E3 71 90 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.01699 47.991 By MS/MS By matching 1 1 3901900 2250900 1651000 287 1393 314 693;694 597 597 1675 1 DEILPTTPISEQK HVSIVEPKDEILPTTP TTPISEQKGGKPEPPA K D E Q K G 0 0 0 1 0 1 2 0 0 2 1 1 0 0 2 1 2 0 0 0 0 0 13 0 1469.7613 P23396;E9PPU1;H0YEU2;E9PL09;E9PSF4 P23396 215 227 RPS3 40S ribosomal protein S3 yes no 2 8.7258E-243 214.61 By MS/MS By MS/MS 1 1 80422000 41785000 38637000 288 927 315 695;696 598;599 598 2116 2 DELILEGNDIELVSNSAALIQQATTVK RPVSQAQKDELILEGN IQQATTVKNKDIRKFL K D E V K N 3 0 2 2 0 2 3 1 0 3 4 1 0 0 0 2 2 0 0 2 0 0 27 0 2883.5077 D6RAN4;H0Y9V9;P32969;H0Y9R4 D6RAN4 137 163 RPL9 60S ribosomal protein L9 yes no 3 2.839E-25 93.179 By matching By MS/MS 1 1 23670000 11379000 12291000 289 368 316 697;698 600 600 1 DETNYGIPQR ________________ TNYGIPQRALRGHSHF R D E Q R A 0 1 1 1 0 1 1 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 10 0 1191.552 D6RFX4;D6R9Z1;D6R9L0;P63244;D6RAU2;E9PD14;D6RFZ9;D6RHH4;D6RAC2;D6REE5;D6RGK8;D6R909;D6RBD0 D6RFX4 7 16 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.0048677 72.879 By MS/MS By MS/MS 1 1 1348500 901660 446830 290 364 317 699;700 601;602 601 1 DFADIPNLR KIKKLTAKDFADIPNL FADIPNLRRLDFTGNL K D F L R R 1 1 1 2 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 9 0 1059.5349 P20774;Q5TBF5 P20774 138 146 OGN Mimecan yes no 2 0.0044446 86.794 By matching By MS/MS 1 1 880770 603990 276780 291 920 318 701;702 603 603 1 DFEDPYNGPGSSLR AYRAQKERDFEDPYNG NGPGSSLRKLRAMCRL R D F L R K 0 1 1 2 0 0 1 2 0 0 1 0 0 1 2 2 0 0 1 0 0 0 14 0 1552.6794 Q15464 Q15464 91 104 SHB SH2 domain-containing adapter protein B yes yes 2 0.017593 46.352 By matching By MS/MS 1 1 822080 372480 449590 292 1124 319 703;704 604 604 1 DFQEYVEPGEDFPASPQR NVLLLVIRDFQEYVEP DFPASPQRRNTASQED R D F Q R R 1 1 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 18 0 2109.928 E9PHI6;Q9Y6G9;C9JGM7 E9PHI6 77 94 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 0.013046 45.357 By MS/MS By matching 1 1 2310900 1156200 1154700 293 448 320 705;706 605 605 1 DGADFAKWR ERCAQYKKDGADFAKW GADFAKWRCVLKIG__ K D G W R C 2 1 0 2 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 9 1 1064.5039 H3BUH7;H3BQN4;J3KPS3;P04075;H3BMQ8;H3BR04;H3BPS8;H3BU78;K7EKH5;C9J8F3;J3KSV6;J3QKP5;A8MVZ9;P09972 H3BUH7 141 149 ALDOA;ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase C yes no 2 0.01557 65.246 By matching By MS/MS 1 1 3638100 2108100 1530000 294 654 321 707;708 606 606 1 DGAGFLINLIDSPGHVDFSSEVTAALR LNFIKQSKDGAGFLIN SEVTAALRVTDGALVV K D G L R V 3 1 1 3 0 0 1 3 1 2 3 0 0 2 1 3 1 0 0 2 0 0 27 0 2800.4032 P13639 P13639 94 120 EEF2 Elongation factor 2 yes yes 3 0.00025873 52.359 By matching By MS/MS 1 1 12839000 7366800 5472400 295 896 322 709;710 607 607 1 DGDDVIIIGVFK KQVQEFLKDGDDVIII VIIIGVFKGESDPAYQ K D G F K G 0 0 0 3 0 0 0 2 0 3 0 1 0 1 0 0 0 0 0 2 0 0 12 0 1289.6867 P13667 P13667 302 313 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.015677 56.013 By MS/MS 1 676280 0 676280 296 897 323 711 608 608 1 DGEEYEWKETAR EMDELCYRDGEEYEWK YEWKETARWLKFEEDV R D G A R W 1 1 0 1 0 0 4 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 12 1 1511.6529 C9JRP1;A0A0A0MST8;E9PFN4;Q9Y6M7 C9JRP1 123 134 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 yes no 2 0.0019384 80.24 By MS/MS By matching 1 1 3153900 1659300 1494600 297 122 324 712;713 609 609 2269 1 DGEQSPNVSLMQR RPESERERDGEQSPNV PNVSLMQRMSDMLSRW R D G Q R M 0 1 1 1 0 2 1 1 0 0 1 0 1 0 1 2 0 0 0 1 0 0 13 0 1459.6725 F2Z305;Q58WW2 F2Z305 332 344 DCAF6 DDB1- and CUL4-associated factor 6 yes no 2 0.0004513 84.17 By MS/MS By MS/MS 2 2 5667200 3036400 2630800 298 483 325;326 714;715;716;717 610;611 611 82 569 2 DGGQTESNEEGKENR KKGVSGQKDGGQTESN NEEGKENRDRDRDYSR K D G N R D 0 1 2 1 0 1 4 3 0 0 0 1 0 0 0 1 1 0 0 0 0 0 15 1 1648.6925 Q14157;F8W726;Q5VU81;Q5VU80;Q5VU79;Q5VU78;Q5VU77 Q14157 110 124 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.0058808 58.626 By matching By MS/MS 1 1 1027500 587010 440480 299 1096 327 718;719 612 612 1 DGKFSPIQEK ENMVVPSRDGKFSPIQ KFSPIQEKSPKQALSS R D G E K S 0 0 0 1 0 1 1 1 0 1 0 2 0 1 1 1 0 0 0 0 0 0 10 1 1147.5873 O43683 O43683 651 660 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 2 0.00038714 92.781 By matching By MS/MS 1 1 2100500 1278700 821820 300 784 328 720;721 613 613 915 1 DGLNQTTIPVSPPSTTKPSR IEDSSVQKDGLNQTTI PSTTKPSREPRKLSYA K D G S R E 0 1 1 1 0 1 0 1 0 1 1 1 0 0 4 3 4 0 0 1 0 0 20 1 2095.0909 X6RLN4;Q71RC2 X6RLN4 360 379 LARP4 La-related protein 4 yes no 3 0.0023453 70.413 By MS/MS By MS/MS 1 1 3253700 2187500 1066200 301 1212 329 722;723 614;615 615 1416 2 DGQAMLWDLNEGK SLCASGGKDGQAMLWD LWDLNEGKHLYTLDGG K D G G K H 1 0 1 2 0 1 1 2 0 0 2 1 1 0 0 0 0 1 0 0 0 0 13 0 1475.6715 D6RFX4;D6R9Z1;D6R9L0;P63244;H0YAF8;H0YAM7;D6RAC2;J3KPE3;H0Y8W2;D6REE5;H0Y8R5 D6RFX4 172 184 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.017609 43.68 By MS/MS By matching 1 1 1317800 802000 515790 302 364 330 724;725 616 616 59 0 DGQDAIAQSPEKESK DSEASKPKDGQDAIAQ QSPEKESKDYEMNANH K D G S K D 2 0 0 2 0 2 2 1 0 1 0 2 0 0 1 2 0 0 0 0 0 0 15 1 1601.7533 Q9NWH9;H0YL55;H7BXE3 Q9NWH9 281 295 SLTM SAFB-like transcription modulator yes no 2;3 7.2526E-14 121.03 By MS/MS By MS/MS 2 2 6517300 3037200 3480100 303 1433 331 726;727;728;729 617;618;619 619 1740 3 DGQVINETSQHHDDLE LIKTVETRDGQVINET SQHHDDLE________ R D G L E - 0 0 1 3 0 2 2 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 16 0 1835.7922 P08670 P08670 451 466 VIM Vimentin yes yes 3 0.00050827 68.972 By MS/MS By MS/MS 1 1 11995000 7116600 4878000 304 874 332 730;731 620;621 621 2 DGSSPPLLEK KTAVQDRKDGSSPPLL SSPPLLEKQTVTKDVT K D G E K Q 0 0 0 1 0 0 1 1 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 0 1041.5342 H7BYY2;Q6W2J9 H7BYY2 420 429 BCOR BCL-6 corepressor yes no 2 0.002476 73.666 By MS/MS By MS/MS 1 1 3722600 1938800 1783700 305 671 333 732;733 622;623 623 794 2 DGVNKDYEETELISTTANYR RDRAKERRDGVNKDYE ISTTANYRAVGPTA__ R D G Y R A 1 1 2 2 0 0 3 1 0 1 1 1 0 0 0 1 3 0 2 1 0 0 20 1 2317.071 D6RAY9;D6REL4;E7EQZ7;Q13123 D6RAY9 115 134 IK Protein Red yes no 3 0.018509 43.164 By matching By MS/MS 1 1 2667600 1607500 1060100 306 371 334 734;735 624 624 2325 1 DGWHSWPIAHQWPQGPSAVDAAFSWEEK YWRLDTSRDGWHSWPI AAFSWEEKLYLVQGTQ R D G E K L 4 0 0 2 0 2 2 2 2 1 0 1 0 1 3 3 0 4 0 1 0 0 28 0 3218.4635 P02790 P02790 290 317 HPX Hemopexin yes yes 4 2.152E-25 90.836 By MS/MS By MS/MS 1 1 8417300 5342600 3074700 307 846 335 736;737 625;626 625 2 DHANYEEDENGDITPIKAK GKKFARKRDHANYEED DITPIKAKKMFLKPQD R D H A K K 2 0 2 3 0 0 3 1 1 2 0 2 0 0 1 0 1 0 1 0 0 0 19 1 2157.9815 H3BSB3;H3BNT4;Q99547 H3BSB3 105 123 MPHOSPH6 M-phase phosphoprotein 6 yes no 3 0.0028971 60.735 By MS/MS By matching 1 1 3141100 1980400 1160700 308 643 336 738;739 627 627 2049 1 DHFGRTFYNQAIMSSKNIAQ QADVFPDRDHFGRTFY MSSKNIAQ________ R D H A Q - 2 1 2 1 0 2 0 1 1 2 0 1 1 2 0 2 1 0 1 0 0 0 20 2 2327.1117 A0A0G2JM88 A0A0G2JM88 189 208 yes yes 3 0.0033608 45.384 By matching By MS/MS 1 1 1701500 1046900 654590 309 177 337 740;741 628 628 18 2277 1 DHSPTPSVFNSDEER TRERERERDHSPTPSV VFNSDEERYRYREYAE R D H E R Y 0 1 1 2 0 0 2 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 15 0 1715.7387 Q6UN15 Q6UN15 490 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 2;3 3.8382E-05 90.229 By MS/MS By MS/MS 2 2 16466000 9097900 7367600 310 1203 338 742;743;744;745 629;630;631;632 632 1409;1410;2183 4 DHTVSGDEDYCPR YRFNHHCKDHTVSGDE GDEDYCPRSKKANLGK K D H P R S 0 1 0 3 1 0 1 1 1 0 0 0 0 0 1 1 1 0 1 1 0 0 13 0 1549.6103 Q9UIG0 Q9UIG0 943 955 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.00032441 86.262 By MS/MS By matching 1 1 2713500 1670000 1043500 311 1459 339 746;747 633 633 1764 1 DIDEVSSLLR CCSAKNLRDIDEVSSL DEVSSLLRTSIMSKQY R D I L R T 0 1 0 2 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1145.5928 H7C4C8;P50990 H7C4C8 148 157 CCT8 T-complex protein 1 subunit theta yes no 2 0.006657 70.256 By MS/MS 1 295370 295370 0 312 682 340 748 634 634 1 DIDISSPEFK VTGREGAKDIDISSPE DISSPEFKIKIPRHEL K D I F K I 0 0 0 2 0 0 1 0 0 2 0 1 0 1 1 2 0 0 0 0 0 0 10 0 1149.5554 Q09666 Q09666 172 181 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.012573 58.172 By MS/MS By MS/MS 1 1 2077700 1035100 1042600 313 1063 341 749;750 635;636 635 2 DIEQVPQQPTYVQALFDFDPQEDGELGFR RNQQIFLRDIEQVPQQ EDGELGFRRGDFIHVM R D I F R R 1 1 0 4 0 5 3 2 0 1 2 0 0 3 3 0 1 0 1 2 0 0 29 0 3380.5837 P62993 P62993 150 178 GRB2 Growth factor receptor-bound protein 2 yes yes 3 0.00013787 51.16 By matching By MS/MS 1 1 60483000 39795000 20687000 314 1028 342 751;752 637 637 1 DIEVLSEDTDYEEDEVTKK KSPERLRKDIEVLSED EEDEVTKKRKDVKKDT K D I K K R 0 0 0 4 0 0 5 0 0 1 1 2 0 0 0 1 2 0 1 2 0 0 19 1 2256.0169 H0Y7Y8;H7C5R6;Q4LE39 H0Y7Y8 185 203 ARID4B AT-rich interactive domain-containing protein 4B yes no 2 0.010741 52.522 By MS/MS By matching 1 1 2262300 1238400 1023900 315 598 343 753;754 638 638 717 1 DIIRQPSEEEIIK IPSAKKYKDIIRQPSE PSEEEIIKLAPPPKKA K D I I K L 0 1 0 1 0 1 3 0 0 4 0 1 0 0 1 1 0 0 0 0 0 0 13 1 1568.841 B1AKZ5;Q15121 B1AKZ5 88 100 PEA15 Astrocytic phosphoprotein PEA-15 yes no 2 0.00014323 100.45 By MS/MS 1 13649000 0 13649000 316 252 344 755 639 639 324 1 DIISIAEDEDLR FDISLFYRDIISIAED IAEDEDLRVHFEESSK R D I L R V 1 1 0 3 0 0 2 0 0 3 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1387.6831 B1AHC9;P12956 B1AHC9 169 180 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.003548 75.652 By MS/MS By matching 1 1 601770 258490 343280 317 249 345 756;757 640 640 1 DIKEESDEEEEDDEESGRLR METLELQKDIKEESDE DEESGRLRFKTERKEG K D I L R F 0 2 0 4 0 0 8 1 0 1 1 1 0 0 0 2 0 0 0 0 0 0 20 2 2408.0099 Q96EV2;H7BXM6;A8MTF7;H7C0H2 Q96EV2 200 219 RBM33 RNA-binding protein 33 yes no 3 0.011714 50.178 By matching By MS/MS 1 1 15848000 8141000 7706700 318 1330 346 758;759 641 641 1569 1 DILIVVGNEIIEAPMAWR GLYSAMPRDILIVVGN IEAPMAWRSRFFEYRA R D I W R S 2 1 1 1 0 0 2 1 0 4 1 0 1 0 1 0 0 1 0 2 0 0 18 0 2038.0921 H0YMX4;P50440 H0YMX4 97 114 GATM Glycine amidinotransferase, mitochondrial yes no 2;3 2.5766E-27 123.38 By MS/MS By MS/MS 3 3 92170000 50373000 41797000 319 629 347 760;761;762;763;764;765 642;643;644;645;646 642 101 4 DINSLYDVSR LERYNMERDINSLYDV NSLYDVSRMYVDPSEI R D I S R M 0 1 1 2 0 0 0 0 0 1 1 0 0 0 0 2 0 0 1 1 0 0 10 0 1180.5724 A0A0A0MRF9;P16885 A0A0A0MRF9 748 757 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 2 0.0062033 66.435 By matching By MS/MS 1 1 2664400 1467300 1197100 320 101 348 766;767 647 647 125 1 DISGPSPSKK FVCDINEKDISGPSPS SGPSPSKKLKKSQCTP K D I K K L 0 0 0 1 0 0 0 1 0 1 0 2 0 0 2 3 0 0 0 0 0 0 10 1 1014.5346 S4R3D6;Q96GX9 S4R3D6 35 44 APIP Methylthioribulose-1-phosphate dehydratase yes no 2 0.0043629 77.124 By MS/MS By MS/MS 1 1 3696900 1719800 1977100 321 1332 349 768;769 648;649 649 1571 1 DITTSADQIAEVK PGLELNKKDITTSADQ ADQIAEVKTMESHPPI K D I V K T 2 0 0 2 0 1 1 0 0 2 0 1 0 0 0 1 2 0 0 1 0 0 13 0 1389.6987 F5H527;Q76I76 F5H527 510 522 SSH2 Protein phosphatase Slingshot homolog 2 yes no 2 0.0040059 82.417 By matching By MS/MS 1 1 968550 503000 465550 322 500 350 770;771 650 650 2009 1 DKAPVQPQQSPAAAPGGTDEKPSGK ________________ TDEKPSGKERRDAGDK R D K G K E 4 0 0 2 0 3 1 3 0 0 0 3 0 0 5 2 1 0 0 1 0 0 25 2 2460.2245 F8WBS8;C9JPC0;Q13200 F8WBS8 7 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 4 0.0015168 48.232 By MS/MS 1 851530 851530 0 323 336 351 772 651 651 399 1 DKEISPSVTK QDKEKPEKDKEISPSV EISPSVTKKNTNKKTK K D K T K K 0 0 0 1 0 0 1 0 0 1 0 2 0 0 1 2 1 0 0 1 0 0 10 1 1102.587 Q8N488 Q8N488 95 104 RYBP RING1 and YY1-binding protein yes yes 2 0.0031605 80.318 By matching By MS/MS 1 1 1599000 764220 834820 324 1256 352 773;774 652 652 1481 1 DKEVSDDEAEEK TLFVEKERDKEVSDDE SDDEAEEKEDKEEEKE R D K E K E 1 0 0 3 0 0 4 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 12 1 1392.5892 P07900;G3V2J8 P07900 227 238 HSP90AA1 Heat shock protein HSP 90-alpha yes no 2 0.010881 67.118 By MS/MS 1 0 0 0 325 868 353 775 653 653 997 1 DKSDSPAIQLR REVLGIKRDKSDSPAI DSPAIQLRLKEPMDVD R D K L R L 1 1 0 2 0 1 0 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 11 1 1228.6412 Q96ST3 Q96ST3 936 946 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 3.5953E-05 123.95 By MS/MS By matching 1 1 1933500 966820 966680 326 1351 354 776;777 654 654 1603 1 DKSPSSLLEDAK PALPRKQRDKSPSSLL SSLLEDAKETCFTRDR R D K A K E 1 0 0 2 0 0 1 0 0 0 2 2 0 0 1 3 0 0 0 0 0 0 12 1 1288.6511 P42684 P42684 629 640 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0049016 71.879 By MS/MS By MS/MS 1 1 3080100 1522200 1558000 327 961 355 778;779 655;656 655 1081 2 DKSPVREPIDNLTPEER RSKSPFRKDKSPVREP DNLTPEERDARTVFCM K D K E R D 0 2 1 2 0 0 3 0 0 1 1 1 0 0 3 1 1 0 0 1 0 0 17 2 1994.0069 Q5QP22;Q5QP23;G3XAC6;Q14498;H0Y4X3 Q5QP22 134 150 RBM39 RNA-binding protein 39 yes no 3 0.017042 48.896 By MS/MS By matching 1 1 93028000 51069000 41959000 328 567 356 780;781 657 657 1 DKVTIADDYSDPFDAK EESGAGKKDKVTIADD YSDPFDAKNDLKSKAG K D K A K N 2 0 0 5 0 0 0 0 0 1 0 2 0 1 1 1 1 0 1 1 0 0 16 1 1798.8261 Q15464 Q15464 238 253 SHB SH2 domain-containing adapter protein B yes yes 2;3 3.1034E-05 88.163 By MS/MS By MS/MS 1 2 2014700 990180 1024500 329 1124 357 782;783;784 658;659 658 1309;2458 2 DKVTYTLLRK GLLKPELKDKVTYTLL VTYTLLRKHRHQTKKS K D K R K H 0 1 0 1 0 0 0 0 0 0 2 2 0 0 0 0 2 0 1 1 0 0 10 2 1235.7238 Q9Y6R1 Q9Y6R1 202 211 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 yes yes 2 0.0045574 58.596 By MS/MS 1 0 0 0 330 1519 358 785 660 660 2247;2248;2517 1 DLADELALVDVIEDK CAISILMKDLADELAL LVDVIEDKLKGEMMDL K D L D K L 2 0 0 4 0 0 2 0 0 1 3 1 0 0 0 0 0 0 0 2 0 0 15 0 1656.8458 P00338;F5GXH2;F5GYU2;F5GXY2;F5GZQ4;F5H5J4;F5H6W8 P00338 43 57 LDHA L-lactate dehydrogenase A chain yes no 2 0.00010749 91.914 By matching By MS/MS 1 1 3904400 2785300 1119100 331 828 359 786;787 661 661 1 DLAVPAALTPR YHTVCTPRDLAVPAAL VPAALTPRASPGHSPH R D L P R A 3 1 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 0 1 0 0 11 0 1122.6397 Q8TEM1 Q8TEM1 1836 1846 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 6.754E-05 128.21 By matching By MS/MS 1 1 5616300 3271800 2344600 332 1286 360 788;789 662 662 2197 1 DLDEEGSEKELHENVLDK FEENGLEKDLDEEGSE LHENVLDKELEENDSE K D L D K E 0 0 1 3 0 0 5 1 1 0 3 2 0 0 0 1 0 0 0 1 0 0 18 1 2097.9702 O43719 O43719 573 590 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.0049456 52.019 By matching By MS/MS 1 1 6222700 3654300 2568500 333 785 361 790;791 663 663 916 1 DLDSQTMMVLVNYIFFK GKITDLIKDLDSQTMM LVNYIFFKAKWEMPFD K D L F K A 0 0 1 2 0 1 0 0 0 1 2 1 2 2 0 1 1 0 1 2 0 0 17 0 2063.0108 G3V595;P01011 G3V595 198 214 SERPINA3 Alpha-1-antichymotrypsin;Alpha-1-antichymotrypsin His-Pro-less yes no 2 1.0354E-83 167.84 By MS/MS 1 27630000 0 27630000 334 564 362 792 664 664 94;95 1 DLEATKSKTMIFYAK SKRSAIFKDLEATKSK KTMIFYAKINELNEEL K D L A K I 2 0 0 1 0 0 1 0 0 1 1 3 1 1 0 1 2 0 1 0 0 0 15 2 1744.907 J3KSU3;F8W7A7;Q5BJE1 J3KSU3 200 214 CCDC178 Coiled-coil domain-containing protein 178 yes no 2 0.01187 45.661 By matching By MS/MS 1 1 1090200 583310 506910 335 528 363 793;794 665 665 2346 0 DLEIEVVLFHPNYNINGK QMIGGEKRDLEIEVVL PNYNINGKKEAGIPEF R D L G K K 0 0 3 1 0 0 2 1 1 2 2 1 0 1 1 0 0 0 1 2 0 0 18 0 2113.0844 H7C5H1;A0A0G2JH38;E7ETN3;B4E1Z4;P00751 H7C5H1 88 105 CFB Complement factor B;Complement factor B Ba fragment;Complement factor B Bb fragment yes no 3 1.2367E-32 132.08 By MS/MS By MS/MS 2 2 19064000 11834000 7230000 336 175 364;365 795;796;797;798 666;667;668;669;670 666 1 5 DLEVVAATPTSLLISWDAPAVTVR STVSDVPRDLEVVAAT DAPAVTVRYYRITYGE R D L V R Y 4 1 0 2 0 0 1 0 0 1 3 0 0 0 2 2 3 1 0 4 0 0 24 0 2523.3585 P02751;H0Y7Z1 P02751 1453 1476 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 2;3 2.9836E-47 154.82 By MS/MS By MS/MS 2 2 138370000 53855000 84515000 337 843 366 799;800;801;802 671;672;673 672 3 DLFDYSPPLHK QVKSEKLKDLFDYSPP DYSPPLHKNLDAREKS K D L H K N 0 0 0 2 0 0 0 0 1 0 2 1 0 1 2 1 0 0 1 0 0 0 11 0 1330.6558 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 505 515 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 7.1304E-06 128.36 By MS/MS By MS/MS 1 1 9602800 5191500 4411300 338 457 367 803;804 674;675;676;677 676 535 4 DLFSLDSEDPSPASPPLR EQILRTGRDLFSLDSE SPASPPLRSSGSSLFP R D L L R S 1 1 0 3 0 0 1 0 0 0 3 0 0 1 4 4 0 0 0 0 0 0 18 0 1941.932 H3BTX0;Q9BTK6 H3BTX0 54 71 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes no 2 0.0021889 68.243 By MS/MS By MS/MS 1 1 15737000 8140300 7597100 339 666 368 805;806 678;679 679 783 2 DLIHDQDEDEEEEEGQR DNRVTSFRDLIHDQDE EEEEEGQRFYAGGSER R D L Q R F 0 1 0 4 0 2 6 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 17 0 2084.8407 F2Z2K0;Q9UNZ2;R4GNE6 F2Z2K0 77 93 NSFL1C NSFL1 cofactor p47 yes no 3 5.8518E-07 93.181 By MS/MS By MS/MS 1 1 2387600 1131400 1256300 340 479 369 807;808 680;681 680 2 DLISLDSSPAKER SPNTPFRKDLISLDSS DSSPAKERLEDGCVHP K D L E R L 1 1 0 2 0 0 1 0 0 1 2 1 0 0 1 3 0 0 0 0 0 0 13 1 1429.7413 Q9UN79 Q9UN79 379 391 SOX13 Transcription factor SOX-13 yes yes 2 2.3395E-06 103.97 By MS/MS 1 396520 0 396520 341 1479 370 809 682 682 1790 1 DLKPETEYVVNVYSVVEDEYSEPLKGTEK METSTVLKDLKPETEY EPLKGTEKTLPVPVVS K D L E K T 0 0 1 2 0 0 6 1 0 0 2 3 0 0 2 2 2 0 3 5 0 0 29 2 3358.6344 D6RGG3;Q99715;A0A087X0A8;H0Y4P7 D6RGG3 1443 1471 COL12A1 Collagen alpha-1(XII) chain yes no 4 0.016482 27.351 By matching By MS/MS 1 1 2967400 1728000 1239400 342 379 371 810;811 683 683 1 DLLIAYYDVDYEK NKDLIQGKDLLIAYYD YYDVDYEKNAKGSNYW K D L E K N 1 0 0 3 0 0 1 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 13 0 1618.7767 P30101 P30101 259 271 PDIA3 Protein disulfide-isomerase A3 yes yes 2 7.3391E-14 137.17 By MS/MS By MS/MS 2 2 16416000 8322500 8093200 343 942 372 812;813;814;815 684;685;686;687;688 685 5 DLLPRDPATWKNSR VLESLVGRDLLPRDPA PATWKNSRHLSKGVEA R D L S R H 1 2 1 2 0 0 0 0 0 0 2 1 0 0 2 1 1 1 0 0 0 0 14 2 1667.8744 F8VUJ9 F8VUJ9 49 62 DNM1L yes yes 3 0.0051513 48.659 By MS/MS By matching 1 1 5629300 4163300 1466000 344 517 373 816;817 689 689 606;2014 1 DLQAICGISCDELSSMVLELR NYIGHKTKDLQAICGI SSMVLELRGLRTIVTT K D L L R G 1 1 0 2 2 1 2 1 0 2 4 0 1 0 0 3 0 0 0 1 0 0 21 0 2408.1386 P07996;CON__Q28194 P07996 265 285 THBS1 Thrombospondin-1 yes no 3 0.0014019 68.88 By MS/MS By MS/MS 1 1 7105600 5385700 1720000 + 345 870 374 818;819 690;691 690 142 2 DLQFVEVTDVK SDTVPSPRDLQFVEVT FVEVTDVKVTIMWTPP R D L V K V 0 0 0 2 0 1 1 0 0 0 1 1 0 1 0 0 1 0 0 3 0 0 11 0 1291.666 P02751 P02751 912 922 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 0.0022327 83.862 By matching By MS/MS 1 1 1800100 1054200 745870 346 843 375 820;821 692 692 1 DLQVSETAETSLTLLWK ATELDTPKDLQVSETA TSLTLLWKTPLAKFDR K D L W K T 1 0 0 1 0 1 2 0 0 0 4 1 0 0 0 2 3 1 0 1 0 0 17 0 1933.0044 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 990 1006 TNC Tenascin yes no 2;3 6.1989E-21 129.17 By MS/MS By MS/MS 6 11 31332000 16689000 14643000 347 435 376 822;823;824;825;826;827;828;829;830;831;832;833;834;835;836;837;838 693;694;695;696;697;698;699;700;701;702;703;704;705;706;707 697 14 DLSLEEIQK PLSPPKKKDLSLEEIQ LSLEEIQKKLEAAEER K D L Q K K 0 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1073.5605 A2A2D0;P16949;E5RGX5;Q93045 A2A2D0 44 52 STMN1;STMN2 Stathmin;Stathmin-2 yes no 2 0.015385 63.426 By MS/MS By matching 1 1 2609700 1493000 1116700 348 223 377 839;840 708 708 1 DLSLEEIQKK PLSPPKKKDLSLEEIQ SLEEIQKKLEAAEERR K D L K K L 0 0 0 1 0 1 2 0 0 1 2 2 0 0 0 1 0 0 0 0 0 0 10 1 1201.6554 A2A2D0;P16949;E5RGX5;Q93045 A2A2D0 44 53 STMN1;STMN2 Stathmin;Stathmin-2 yes no 2 0.015117 65.232 By MS/MS By matching 1 1 1719500 904320 815200 349 223 378 841;842 709 709 1 DLSQESSSTAPGSEVTIKQEPVSPK LTAEATGKDLSQESSS KQEPVSPKKKENALLR K D L P K K 1 0 0 1 0 2 3 1 0 1 1 2 0 0 3 6 2 0 0 2 0 0 25 1 2600.2817 E7EWM1;Q15596 E7EWM1 714 738 NCOA2 Nuclear receptor coactivator 2 yes no 3 0.0063897 45.784 By MS/MS By matching 1 1 3888700 2272200 1616600 350 430 379 843;844 710 710 506;1990 1 DLTHSDSESSLHMSDR QHGLGSQRDLTHSDSE SSLHMSDRQRVAPKPP R D L D R Q 0 1 0 3 0 0 1 0 2 0 2 0 1 0 0 5 1 0 0 0 0 0 16 0 1815.7694 H0YDB2;E9PNJ4;Q13586 H0YDB2 277 292 STIM1 Stromal interaction molecule 1 yes no 3 0.00082832 66.674 By MS/MS By matching 1 1 3959200 2114800 1844400 351 469 380 845;846 711 711 554 1 DLTYQVVLGEYNLAVK TAGHCISRDLTYQVVL GEYNLAVKEGPEQVIP R D L V K E 1 0 1 1 0 1 1 1 0 0 3 1 0 0 0 0 1 0 2 3 0 0 16 0 1823.9669 B1AQ52;P09093 B1AQ52 78 93 CELA3A Chymotrypsin-like elastase family member 3A yes no 2 2.0026E-19 115.14 By MS/MS By MS/MS 1 1 7860400 4273300 3587000 352 257 381 847;848 712;713 712 2 DLVLPTQALPASPALK AFAKLDQKDLVLPTQA LPASPALKNKRPRKDE K D L L K N 3 0 0 1 0 1 0 0 0 0 4 1 0 0 3 1 1 0 0 1 0 0 16 0 1632.9451 J3KSZ6;U3KQ35;H3BR06;Q15554 J3KSZ6 98 113 TERF2 Telomeric repeat-binding factor 2 yes no 2 0.0014569 73.722 By MS/MS By MS/MS 1 1 10210000 5781500 4428300 353 657 382 849;850 714;715 715 772 2 DLVQPDKPASPK SGHLMQTRDLVQPDKP PDKPASPKFIVTLDGV R D L P K F 1 0 0 2 0 1 0 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 12 1 1293.6929 G3V4R5;G3V411;H0YJA2;Q6PJT7 G3V4R5 183 194 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 2;3 0.00063924 85.28 By MS/MS By MS/MS 1 2 12933000 683760 12250000 354 558 383 851;852;853 716;717;718 716 657 3 DLVVTEVTEETVNLAWDNEMR CSEVSPPKDLVVTEVT LAWDNEMRVTEYLVVY K D L M R V 1 1 2 2 0 0 4 0 0 0 2 0 1 0 0 0 3 1 0 4 0 0 21 0 2462.1635 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 628 648 TNC Tenascin yes no 2 0.0024296 56.599 By MS/MS By MS/MS 1 1 10844000 6621900 4222500 355 435 384 854;855 719;720 720 76 2 DLYLASVFHATAFELDTDGNPFDQDIYGR LSRMSGKKDLYLASVF FDQDIYGREELRSPKL K D L G R E 3 1 1 5 0 1 1 2 1 1 3 0 0 3 1 1 2 0 2 1 0 0 29 0 3289.5204 P50454;E9PKH2 P50454 345 373 SERPINH1 Serpin H1 yes no 3 5.1325E-18 88.001 By matching By MS/MS 1 1 31061000 19337000 11724000 356 988 385 856;857 721 721 1 DMAIATGGAVFGEEGLTLNLEDVQPHDLGK DNRKNQLKDMAIATGG VQPHDLGKVGEVIVTK K D M G K V 3 0 1 3 0 1 3 5 1 1 4 1 1 1 1 0 2 0 0 2 0 0 30 0 3096.5074 P10809 P10809 315 344 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 1.4083E-12 82.086 By MS/MS By MS/MS 1 1 18240000 12821000 5419300 357 883 386 858;859 722;723 722 149 2 DMESPTKLDVTLAK KTEVALAKDMESPTKL KLDVTLAKDMQPSMES K D M A K D 1 0 0 2 0 0 1 0 0 0 2 2 1 0 1 1 2 0 0 1 0 0 14 1 1546.7913 E7EVA0;P27816;H7C456 E7EVA0 294 307 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 0.0003337 87.363 By MS/MS By matching 2 2 41754000 19182000 22573000 358 427 387 860;861;862;863 724;725 724 496 2 DMQPLSPISVHER TDSGSLRRDMQPLSPI SPISVHERYSSPTAGS R D M E R Y 0 1 0 1 0 1 1 0 1 1 1 0 1 0 2 2 0 0 0 1 0 0 13 0 1507.7453 P28749 P28749 635 647 RBL1 Retinoblastoma-like protein 1 yes yes 2 0.01124 52.265 By matching By MS/MS 1 1 1962100 903840 1058200 359 937 388 864;865 726 726 1054 1 DMSLYASLTSEK LSDVAPPRDMSLYASL YASLTSEKVQSLEGEK R D M E K V 1 0 0 1 0 0 1 0 0 0 2 1 1 0 0 3 1 0 1 0 0 0 12 0 1343.6279 P46821 P46821 1758 1769 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0012692 70.552 By MS/MS By matching 1 1 1216200 459100 757070 360 968 389 866;867 727 727 169 2416 1 DNCQYVYNVDQR GDGILNERDNCQYVYN YVYNVDQRDTDMDGVG R D N Q R D 0 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 12 0 1572.6627 P07996 P07996 811 822 THBS1 Thrombospondin-1 yes yes 2 0.0037082 73.9 By MS/MS 1 407000 407000 0 + 361 870 390 868 728 728 1 DNIQGITKPAIR KRHRKVLRDNIQGITK GITKPAIRRLARRGGV R D N I R R 1 1 1 1 0 1 0 1 0 3 0 1 0 0 1 0 1 0 0 0 0 0 12 1 1324.7463 P62805 P62805 25 36 HIST1H4A Histone H4 yes yes 3 0.00024861 92.247 By MS/MS By matching 1 1 2653800 1811700 842060 362 1025 391 869;870 729 729 1 DNQESSDAELSSSEYIK PSSKKLKKDNQESSDA LSSSEYIKTDLDAMDI K D N I K T 1 0 1 2 0 1 3 0 0 1 1 1 0 0 0 5 0 0 1 0 0 0 17 0 1900.8174 Q96JM3 Q96JM3 622 638 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0097973 48.513 By MS/MS By matching 1 1 1639700 734100 905610 363 1338 392 871;872 730 730 1579;1580 1 DNTFFRESPVGR RERSPYKRDNTFFRES FRESPVGRKDSPHSRS R D N G R K 0 2 1 1 0 0 1 1 0 0 0 0 0 2 1 1 1 0 0 1 0 0 12 1 1423.6844 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8;F8VPY7;F8VWU8 F8WF16 78 89 PPHLN1 Periphilin-1 yes no 3 0.0027077 71.03 By MS/MS By MS/MS 1 1 8671000 4865200 3805800 364 292 393 873;874 731;732 732 350 2 DNVTSNKIR D N I R 0 1 2 1 0 0 0 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 9 1 1045.5516 REV__Q6PH81 yes no 2 0.0077666 77.744 By MS/MS 1 1162900 1162900 0 + 365 1531 394 875 733 733 1876 1 DPKYPVENLLNPDSPRR SSRGQKAKDPKYPVEN LNPDSPRRPWLGCPQD K D P R R P 0 2 2 2 0 0 1 0 0 0 2 1 0 0 4 1 0 0 1 1 0 0 17 2 2009.033 E9PQ18 E9PQ18 47 63 yes yes 2 0.011179 42.556 By MS/MS By matching 1 1 1123300 517910 605430 366 474 395 876;877 734 734 560;2336 1 DQDLFVQNCAALSSGAFWFR QKFSTFDRDQDLFVQN SSGAFWFRSCHFANLN R D Q F R S 3 1 1 2 1 2 0 1 0 0 2 0 0 3 0 2 0 1 0 1 0 0 20 0 2331.0743 K7ES70;P55083 K7ES70 216 235 MFAP4 Microfibril-associated glycoprotein 4 yes no 2 7.0964E-11 114.64 By matching By MS/MS 1 1 18951000 10888000 8062800 367 739 396 878;879 735 735 1 DQEPKPSPEPAAVSR GGGELDKKDQEPKPSP PEPAAVSRGGGGEPGA K D Q S R G 2 1 0 1 0 1 2 0 0 0 0 1 0 0 4 2 0 0 0 1 0 0 15 1 1606.7951 Q9H7S9 Q9H7S9 246 260 ZNF703 Zinc finger protein 703 yes yes 2;3 4.8041E-05 86.214 By MS/MS By MS/MS 2 2 16090000 9295100 6795100 368 1405 397 880;881;882;883 736;737;738 738 1697 3 DQFNLIVFSTEATQWR ILDDLSPRDQFNLIVF STEATQWRPSLVPASA R D Q W R P 1 1 1 1 0 2 1 0 0 1 1 0 0 2 0 1 2 1 0 1 0 0 16 0 1953.9585 H7C0L5;B7ZKJ8;Q14624 H7C0L5 166 181 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 0.0023306 63.16 By MS/MS 1 808270 0 808270 369 296 398 884 739 739 1 DQGSFTEVVSISNLGMAK ACQMKYEKDQGSFTEV ISNLGMAKTGPVVEDS K D Q A K T 1 0 1 1 0 1 1 2 0 1 1 1 1 1 0 3 1 0 0 2 0 0 18 0 1881.9142 P11717 P11717 837 854 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.019628 40.577 By MS/MS 1 0 0 0 370 890 399 885 740 740 1 DQIQDVEGRYMQGLKELK LRDIYDLKDQIQDVEG MQGLKELKESLSEVEE K D Q L K E 0 1 0 2 0 3 2 2 0 1 2 2 1 0 0 0 0 0 1 1 0 0 18 2 2149.0838 C9JSU1;Q9Y608 C9JSU1 120 137 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 3 0.010117 41.412 By MS/MS By matching 1 1 1287700 713490 574210 371 340 400 886;887 741 741 56 1 DQKTDDEGKLEQTDK D Q D K 0 0 0 4 0 2 2 1 0 0 1 3 0 0 0 0 2 0 0 0 0 0 15 2 1748.8065 REV__Q9H2G2 yes yes 3 0.0083836 42.947 By matching By MS/MS 1 1 34796000 21153000 13643000 + 372 1540 401 888;889 742 742 2252 1 DQLNGGNSHYK D Q Y K 0 0 2 1 0 1 0 2 1 0 1 1 0 0 0 1 0 0 1 0 0 0 11 0 1231.5582 REV__Q6ZP01 yes no 2 0.007625 49.536 By MS/MS 1 841490 841490 0 + 373 1522 402 890 743 743 1 DQMEGSPNSSESFEHIAR PPKPLMRRDQMEGSPN ESFEHIARSARDHAIS R D Q A R S 1 1 1 1 0 1 3 1 1 1 0 0 1 1 1 4 0 0 0 0 0 0 18 0 2019.8592 E7EPN9;Q9Y520 E7EPN9 776 793 PRRC2C Protein PRRC2C yes no 3 0.015769 40.798 By MS/MS By matching 1 1 1346400 908400 438040 374 406 403 891;892 744 744 68 0 DQSSLPSQMSLK D Q L K 0 0 0 1 0 2 0 0 0 0 2 1 1 0 1 4 0 0 0 0 0 0 12 0 1319.6391 REV__A0A1B0GUS7 yes yes 2 0.0043276 49.06 By MS/MS 1 549440 0 549440 + 375 1524 404 893 745 745 263 1867;1868;1869 1 DQTPDENDQVIVK AAEVVVPRDQTPDEND ENDQVIVKIIGHFYAS R D Q V K I 0 0 1 3 0 2 1 0 0 1 0 1 0 0 1 0 1 0 0 2 0 0 13 0 1499.7104 Q9NZI8 Q9NZI8 526 538 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.0084235 60.641 By MS/MS By matching 1 1 2033500 1198500 835080 376 1445 405 894;895 746 746 0 DQVANSAFVER YYITGETKDQVANSAF ANSAFVERLRKHGLEV K D Q E R L 2 1 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1234.5942 P07900 P07900 500 510 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.015259 58.592 By matching By MS/MS 1 1 3138000 1780400 1357600 377 868 406 896;897 747 747 1 DQVTEMAPKK EKPVKEEKDQVTEMAP VTEMAPKKTSKIASLI K D Q K K T 1 0 0 1 0 1 1 0 0 0 0 2 1 0 1 0 1 0 0 1 0 0 10 1 1145.5751 F8VZV4;Q8IVL0 F8VZV4 489 498 NAV3 Neuron navigator 3 yes no 2 0.0086694 63.48 By matching By MS/MS 1 1 832510 469800 362720 378 524 407 898;899 748 748 1 DQYELLCLDNTR NLANKADRDQYELLCL LLCLDNTRKPVDEYKD R D Q T R K 0 1 1 2 1 1 1 0 0 0 3 0 0 0 0 0 1 0 1 0 0 0 12 0 1538.7035 P02787;C9JVG0 P02787 240 251 TF Serotransferrin yes no 2 0.0012378 90.653 By MS/MS By matching 1 1 907880 682220 225670 379 845 408 900;901 749 749 1 DRPAMQLYQPGAR KRDRIRNKDRPAMQLY QLYQPGARSRNRLCPP K D R A R S 2 2 0 1 0 2 0 1 0 0 1 0 1 0 2 0 0 0 1 0 0 0 13 1 1501.746 A0A1B0GVA2;Q9BZI7 A0A1B0GVA2 60 72 UPF3B Regulator of nonsense transcripts 3B yes no 3 0.0019714 73.927 By matching By MS/MS 1 1 1377400 758960 618400 380 216 409 902;903 750 750 2287 1 DRSSPPPGYIPDELHQVAR SIIGPTSRDRSSPPPG DELHQVARNGSFTSIN R D R A R N 1 2 0 2 0 1 1 1 1 1 1 0 0 0 4 2 0 0 1 1 0 0 19 1 2133.0603 Q9Y2U5 Q9Y2U5 161 179 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 yes yes 3 0.0072831 48.597 By MS/MS By matching 1 1 1802300 1072600 729730 381 1499 410 904;905 751 751 1832;1833 1 DRTPPLLYR PDPLRGARDRTPPLLY RTPPLLYRDRDRDLYP R D R Y R D 0 2 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 1 0 0 0 9 1 1129.6244 A0A087WWP4;Q96T37 A0A087WWP4 522 530 RBM15 Putative RNA-binding protein 15 yes no 2 0.0055764 91.701 By matching By MS/MS 1 1 13182000 7586500 5595700 382 45 411 906;907 752 752 1899 1 DSAIPVESDTDDEGAPR RKNVNIYRDSAIPVES TDDEGAPRISLAEMLE R D S P R I 2 1 0 4 0 0 2 1 0 1 0 0 0 0 2 2 1 0 0 1 0 0 17 0 1772.7701 C9JA08;Q96D46 C9JA08 461 477 NMD3 60S ribosomal export protein NMD3 yes no 2 0.0016783 73.208 By MS/MS By matching 1 1 6084100 3613200 2470800 383 325 412 908;909 753;754 754 389 2 DSAYQSITHYRPVSASR RERPMYGRDSAYQSIT YRPVSASRSSLDLSYY R D S S R S 2 2 0 1 0 1 0 0 1 1 0 0 0 0 1 4 1 0 2 1 0 0 17 1 1936.9391 Q5HY57;P50402 Q5HY57 123 139 EMD Emerin yes no 3 0.0007781 78.326 By MS/MS By MS/MS 1 1 5604800 3363500 2241400 384 987 413 910;911 755;756 756 1134;2426 2 DSDAGSSTPTTSTR KSSRKRKRDSDAGSST STPTTSTRSRDKDDES R D S T R S 1 1 0 2 0 0 0 1 0 0 0 0 0 0 1 4 4 0 0 0 0 0 14 0 1381.5957 K7EP28;Q9HBD4;A0A0A0MT49;P51532 K7EP28 109 122 SMARCA4 Transcription activator BRG1 yes no 2 0.004817 56.569 By MS/MS By matching 1 1 955650 444310 511340 385 126 414 912;913 757 757 154;1924 1 DSENLASPSEYPENGER NLFSPVNRDSENLASP EYPENGERFSFLSKPV R D S E R F 1 1 2 1 0 0 4 1 0 0 1 0 0 0 2 3 0 0 1 0 0 0 17 0 1892.8024 P52948 P52948 617 633 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 2 0.0087061 71.601 By matching By MS/MS 1 1 5907700 2850000 3057700 386 1003 415 914;915 758 758 1149 1 DSFSHSPGAVSSLK LSRSDVFRDSFSHSPG PGAVSSLKVFTGLAAP R D S L K V 1 0 0 1 0 0 0 1 1 0 1 1 0 1 1 5 0 0 0 1 0 0 14 0 1417.6838 Q9H6R7 Q9H6R7 685 698 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes yes 2;3 0.00069498 80.371 By MS/MS By MS/MS 2 2 8961200 5599700 3361500 387 1401 416 916;917;918;919 759;760;761 760 1691 3 DSGRGDSVSDSGSDALR RLRKNSSRDSGRGDSV DSGSDALRSGLTVPTS R D S L R S 1 2 0 4 0 0 0 3 0 0 1 0 0 0 0 5 0 0 0 1 0 0 17 1 1679.7347 Q53EL6;Q5VZS7 Q53EL6 70 86 PDCD4 Programmed cell death protein 4 yes no 3 0.00018572 82.663 By MS/MS By MS/MS 1 1 3295300 1817200 1478200 388 1149 417 920;921 762;763 763 1337 2 DSHSSEEDEASSQTDLSQTISK VMTRRGLRDSHSSEED DLSQTISKKTVRSIQE R D S S K K 1 0 0 3 0 2 3 0 1 1 1 1 0 0 0 7 2 0 0 0 0 0 22 0 2380.015 H0YDU3;A0A0A0MSK5;J3KN66;Q5JTV8 H0YDU3 56 77 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.00054719 72.568 By MS/MS By matching 1 1 4788200 2001900 2786400 389 119 418 922;923 764 764 144;145;146 1 DSITTWEILAVSMSDK KLMNIFLKDSITTWEI LAVSMSDKKGICVADP K D S D K K 1 0 0 2 0 0 1 0 0 2 1 1 1 0 0 3 2 1 0 1 0 0 16 0 1794.871 P01024 P01024 797 812 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha chain;Complement C3c alpha chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha chain fragment 2 yes yes 2 0.012355 46.88 By matching By MS/MS 1 1 1827100 831120 995960 + 390 838 419 924;925 765 765 131 1 DSLITPHVSR EAKTAQEKDSLITPHV LITPHVSRSSTPRESP K D S S R S 0 1 0 1 0 0 0 0 1 1 1 0 0 0 1 2 1 0 0 1 0 0 10 0 1123.5986 P49792;H7BZ48;J3KQ37;F8VYC4;J3KNE0;P0DJD0;P0DJD1;Q7Z3J3;A6NKT7;Q99666;O14715 P49792 2446 2455 RANBP2;RGPD6;RGPD8;RGPD1;RGPD3;RGPD2;RGPD4;RGPD5 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 2 0.012535 58.274 By MS/MS 1 363030 0 363030 391 981 420 926 766 766 1 DSLLQDGEFSMDLR GQKCSVIRDSLLQDGE GEFSMDLRTKSTGGAP R D S L R T 0 1 0 3 0 1 1 1 0 0 3 0 1 1 0 2 0 0 0 0 0 0 14 0 1624.7403 P07737;K7EJ44 P07737 76 89 PFN1 Profilin-1 yes no 2 0.011066 50.284 By matching By MS/MS 1 1 927580 382270 545310 392 866 421 927;928 767 767 141 1 DSMSAAEVGTGQYATTK ENHEIYMKDSMSAAEV TGQYATTKGISQTNLI K D S T K G 3 0 0 1 0 1 1 2 0 0 0 1 1 0 0 2 3 0 1 1 0 0 17 0 1715.7672 A8K968;A0A0A0MRA8;A0A0A0MSA4;J3KT37;A0A0J9YW26;A0A1B0GTF8 A8K968 350 366 EPB41L3 yes no 2 1.9475E-07 100.04 By MS/MS By matching 2 2 7710000 3765600 3944400 393 98 422;423 929;930;931;932 768;769 769 15 1912;2266 2 DSNAPKSPLTGYVR RKRKKPLRDSNAPKSP SPLTGYVRFMNERREQ R D S V R F 1 1 1 1 0 0 0 1 0 0 1 1 0 0 2 2 1 0 1 1 0 0 14 1 1503.7682 H0YNS8;H0YKM5;Q9NP66 H0YNS8 99 112 HMG20A High mobility group protein 20A yes no 2 0.003247 65.695 By matching By MS/MS 1 1 6424500 3350900 3073700 394 623 424 933;934 770 770 745 0 DSPVLIDFFEDTER SSALANTKDSPVLIDF DFFEDTERYRKQANKA K D S E R Y 0 1 0 3 0 0 2 0 0 1 1 0 0 2 1 1 1 0 0 1 0 0 14 0 1681.7835 P04196 P04196 140 153 HRG Histidine-rich glycoprotein yes yes 2 3.3836E-07 102.4 By matching By MS/MS 1 1 5600500 2994100 2606400 395 850 425 935;936 771 771 1 DSTLIMQLLR TLNEDSYKDSTLIMQL TLIMQLLRDNLTLWTS K D S L R D 0 1 0 1 0 1 0 0 0 1 3 0 1 0 0 1 1 0 0 0 0 0 10 0 1188.6536 P27348;Q04917;P31946;P61981;P31947;B7Z2E6;H0YB80;B0AZS6;E7EX29;P63104;P62258;K7EM20 P27348 213 222 YWHAQ;YWHAH;YWHAB;YWHAG;SFN;YWHAZ;YWHAE 14-3-3 protein theta;14-3-3 protein eta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein epsilon no no 2 6.4221E-07 96.711 By MS/MS By MS/MS 1 1 819950 0 819950 396 933;1022;432 426 937;938 772;773 772 74 2 DSVFLSCSEDNR CVAASPHKDSVFLSCS LSCSEDNRILLWDTRC K D S N R I 0 1 1 2 1 0 1 0 0 0 1 0 0 1 0 3 0 0 0 1 0 0 12 0 1427.5987 Q9BQA1;H0Y711 Q9BQA1 180 191 WDR77 Methylosome protein 50 yes no 2 0.012385 59.908 By MS/MS By matching 1 1 690770 503050 187720 397 1361 427 939;940 774 774 1 DSWEDIFELLFWGR EHFAMMQRDSWEDIFE FELLFWGRTSAGTRQP R D S G R T 0 1 0 2 0 0 2 1 0 1 2 0 0 2 0 1 0 2 0 0 0 0 14 0 1811.8519 P04004 P04004 311 324 VTN Vitronectin;Vitronectin V65 subunit;Vitronectin V10 subunit;Somatomedin-B yes yes 2 0.0062311 54.951 By matching By MS/MS 1 1 5902000 1034400 4867700 398 848 428 941;942 775 775 982 1 DSYVGDEAQSK VMVGMGQKDSYVGDEA VGDEAQSKRGILTLKY K D S S K R 1 0 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 11 0 1197.515 P63261;P60709;I3L3I0;I3L1U9;A6NL76;P68133;P68032;C9JUM1;C9JZR7;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;P63267;P62736;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 51 61 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 2 0.016947 58.699 By MS/MS By matching 1 1 2621000 1674200 946790 399 1017 429 943;944 776 776 1 DTASLSTTPSESPR RGVQVLPRDTASLSTT TTPSESPRAQATSRLS R D T P R A 1 1 0 1 0 0 1 0 0 0 1 0 0 0 2 4 3 0 0 0 0 0 14 0 1447.6791 H0YJ30;G3V582;F5H039;Q9NQX3 H0YJ30 192 205 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 2 0.0017665 72.315 By MS/MS By MS/MS 1 1 1140800 550310 590480 400 493 430 945;946 777;778 778 582;583;584 2 DTEEEDFHVDQVTTVK WERPFEVKDTEEEDFH VDQVTTVKVPMMKRLG K D T V K V 0 0 0 3 0 1 3 0 1 0 0 1 0 1 0 0 3 0 0 3 0 0 16 0 1890.8483 P01009 P01009 226 241 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes yes 3 0.00072445 71.529 By MS/MS By matching 1 1 1438000 981420 456600 401 836 431 947;948 779 779 1 DTGKTPVEPEVAIHR ________________ EPEVAIHRIRITLTSR K D T H R I 1 1 0 1 0 0 2 1 1 1 0 1 0 0 2 0 2 0 0 2 0 0 15 1 1647.858 E5RIP1;E5RJX2;P60866 E5RIP1 5 19 RPS20 40S ribosomal protein S20 yes no 3 0.0026685 57.708 By MS/MS 1 1697000 1697000 0 402 391 432 949 780 780 1972 1 DTIEDLSRQWRSHALNTSQ DNWMLMLRDTIEDLSR SHALNTSQ________ R D T S Q - 1 2 1 2 0 2 1 0 1 1 2 0 0 0 0 3 2 1 0 0 0 0 19 2 2256.0883 Q86YJ6 Q86YJ6 466 484 THNSL2 Threonine synthase-like 2 yes yes 2 0.0063712 42.556 By MS/MS By matching 1 1 1428700 1025500 403150 403 1236 433 950;951 781 781 1455;1456;2189 1 DTILNINFQCAYPLDMK LVNDFIIRDTILNINF CAYPLDMKVSLQAALQ R D T M K V 1 0 2 2 1 1 0 0 0 2 2 1 1 1 1 0 1 0 1 0 0 0 17 0 2054.9805 P55259 P55259 311 327 GP2 Pancreatic secretory granule membrane major glycoprotein GP2 yes yes 2 4.3155E-06 89.466 By MS/MS By MS/MS 1 2 9552500 3796800 5755700 404 1011 434;435 952;953;954 782;783;784 783 182 2 DTISYTELDFELIK VRIDIMEKDTISYTEL ELDFELIKVEVKEMEK K D T I K V 0 0 0 2 0 0 2 0 0 2 2 1 0 1 0 1 2 0 1 0 0 0 14 0 1685.84 Q6UX06 Q6UX06 147 160 OLFM4 Olfactomedin-4 yes yes 2 9.3795E-106 176.95 By MS/MS By MS/MS 1 1 43314000 16567000 26746000 405 1206 436 955;956 785;786 785 2 DTLQSELVGQLYK HFLVNHVKDTLQSELV ELVGQLYKSSLLDDLL K D T Y K S 0 0 0 1 0 2 1 1 0 0 3 1 0 0 0 1 1 0 1 1 0 0 13 0 1492.7773 G8JLD5;O00429 G8JLD5 656 668 DNM1L Dynamin-1-like protein yes no 2 0.016371 46.406 By MS/MS 1 0 0 0 406 577 437 957 787 787 2353 1 DTPACSRRSLR VRSPARNKDTPACSRR ACSRRSLRKTPLKTAN K D T L R K 1 3 0 1 1 0 0 0 0 0 1 0 0 0 1 2 1 0 0 0 0 0 11 2 1317.6572 P42695 P42695 1480 1490 NCAPD3 Condensin-2 complex subunit D3 yes yes 2 0.0099112 60.161 By MS/MS By matching 1 1 1836800 1077200 759550 407 962 438 958;959 788 788 1083;1084 0 DTSFTVCPDVPRTPVGK MLNLLLERDTSFTVCP VPRTPVGKFLGDSANL R D T G K F 0 1 0 2 1 0 0 1 0 0 0 1 0 1 3 1 3 0 0 3 0 0 17 1 1874.9196 D6RJC2;P30307;D6RD20 D6RJC2 36 52 CDC25C M-phase inducer phosphatase 3 yes no 3 0.015484 45.369 By MS/MS By matching 1 1 889790 437260 452530 408 382 439 960;961 789 789 1 DTSPSSGSAVSSSK VQSLKTSRDTSPSSGS GSAVSSSKVLDKPSRL R D T S K V 1 0 0 1 0 0 0 1 0 0 0 1 0 0 1 7 1 0 0 1 0 0 14 0 1295.5841 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8 F8WF16 136 149 PPHLN1 Periphilin-1 yes no 2 0.017499 46.408 By matching By MS/MS 1 1 4167200 2338100 1829000 409 292 440 962;963 790 790 1 DTTPLNVLCSPGIQVVSVGIK DGRSDTQRDTTPLNVL QVVSVGIKDVFDFIPG R D T I K D 0 0 1 1 1 1 0 2 0 2 2 1 0 0 2 2 2 0 0 4 0 0 21 0 2196.1824 A0A087X0S5;P12109 A0A087X0S5 735 755 COL6A1 Collagen alpha-1(VI) chain yes no 2;3 8.3928E-05 70.98 By MS/MS By matching 2 1 9014900 6112800 2902100 410 74 441 964;965;966 791;792 792 2 DTTVISHSPNTSYDTALEAR AATVAAQRDTTVISHS YDTALEARIQKEEEEI R D T A R I 2 1 1 2 0 0 1 0 1 1 1 0 0 0 1 3 4 0 1 1 0 0 20 0 2177.0237 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 707 726 AMOT Angiomotin yes no 2;3 5.8878E-34 131.48 By MS/MS By MS/MS 3 3 128870000 74006000 54862000 411 1147 442;443 967;968;969;970;971;972 793;794;795;796 795 1334;2167 4 DTVASVMYTVVTPMLNPFIYSLR PSTHSAQKDTVASVMY NPFIYSLRNQEIKSSL K D T L R N 1 1 1 1 0 0 0 0 0 1 2 0 2 1 2 2 3 0 2 4 0 0 23 0 2616.3332 P47890 P47890 271 293 OR1G1 Olfactory receptor 1G1 yes yes 3 0.0044045 41.53 By MS/MS 1 1325100 1325100 0 412 971 444 973 797 797 170 1105;2127 1 DVDASPSPLSVQDLK PPAELVQRDVDASPSP PLSVQDLKGLGYEKGK R D V L K G 1 0 0 3 0 1 0 0 0 0 2 1 0 0 2 3 0 0 0 2 0 0 15 0 1569.7886 Q8IWZ8 Q8IWZ8 405 419 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 2 0.0010908 80.834 By MS/MS By MS/MS 1 1 3246200 1929900 1316400 413 1244 445 974;975 798;799 799 1470 2 DVDDGSGSPHSPHQLSSK PEAAFLSRDVDDGSGS SPHQLSSKSLPSQNLS R D V S K S 0 0 0 3 0 1 0 2 2 0 1 1 0 0 2 5 0 0 0 1 0 0 18 0 1848.8238 F5GWT4;Q9H4A3 F5GWT4 1774 1791 WNK1 Serine/threonine-protein kinase WNK1 yes no 3 0.001187 66.76 By MS/MS 1 0 0 0 414 485 446 976 800 800 570 1 DVEDMELSDVEDDGSK PEPVTDNRDVEDMELS DVEDDGSKIIVEDRKE R D V S K I 0 0 0 5 0 0 3 1 0 0 1 1 1 0 0 2 0 0 0 2 0 0 16 0 1781.7149 Q5VT52 Q5VT52 367 382 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 1.9746E-07 99.069 By MS/MS By MS/MS 2 2 12442000 5637400 6804300 415 1176 447;448 977;978;979;980 801;802;803;804 804 212 1384 4 DVFDFIPGSDQLNVISCQGLAPSQGR QVVSVGIKDVFDFIPG GLAPSQGRPGLSLVKE K D V G R P 1 1 1 3 1 3 0 3 0 2 2 0 0 2 2 3 0 0 0 2 0 0 26 0 2819.3548 A0A087X0S5;P12109 A0A087X0S5 756 781 COL6A1 Collagen alpha-1(VI) chain yes no 3 0.0061072 42.106 By matching By MS/MS 1 1 11931000 8727000 3203600 416 74 449 981;982 805 805 1 DVFLGMFLYEYAR CKNYAEAKDVFLGMFL MFLYEYARRHPDYSVV K D V A R R 1 1 0 1 0 0 1 1 0 0 2 0 1 2 0 0 0 0 2 1 0 0 13 0 1622.7803 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 348 360 ALB Serum albumin yes no 2 8.2548E-20 145.28 By MS/MS By MS/MS 29 24 933090000 369940000 563150000 + 417 152 450;451 983;984;985;986;987;988;989;990;991;992;993;994;995;996;997;998;999;1000;1001;1002;1003;1004;1005;1006;1007;1008;1009;1010;1011;1012;1013;1014;1015;1016;1017;1018;1019;1020;1021;1022;1023;1024;1025;1026;1027;1028;1029;1030;1031;1032;1033;1034;1035 806;807;808;809;810;811;812;813;814;815;816;817;818;819;820;821;822;823;824;825;826;827;828;829;830;831;832;833;834;835;836;837;838;839;840;841;842;843;844;845;846;847;848;849;850;851 806 22 38 DVLSVAFSSDNR RRFVGHTKDVLSVAFS VAFSSDNRQIVSGSRD K D V N R Q 1 1 1 2 0 0 0 0 0 0 1 0 0 1 0 3 0 0 0 2 0 0 12 0 1308.631 D6RFX4;D6R9Z1;D6R9L0;P63244;D6RAU2;E9PD14;D6RFZ9;H0YAF8;D6RHH4;H0YAM7;J3KPE3;H0Y8W2 D6RFX4 66 77 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.013235 58.676 By MS/MS By matching 1 1 406110 188770 217340 418 364 452 1036;1037 852 852 1 DVNAAIATIK YRGDVVPKDVNAAIAT NAAIATIKTKRTIQFV K D V I K T 3 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 10 0 1014.571 Q71U36;P68363;F5H5D3;Q9BQE3;Q6PEY2;Q13748 Q71U36 327 336 TUBA1A;TUBA1B;TUBA1C;TUBA3E;TUBA3C Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2 0.0028972 82.287 By MS/MS By matching 1 1 2401400 1584300 817120 419 1030 453 1038;1039 853 853 1 DVQLEGGCNYDYIEVFDGPYR YRVTVIFRDVQLEGGC EVFDGPYRSSPLIARV R D V Y R S 0 1 1 3 1 1 2 3 0 1 1 0 0 1 1 0 0 0 3 2 0 0 21 0 2508.0904 Q9UGM3 Q9UGM3 2052 2072 DMBT1 Deleted in malignant brain tumors 1 protein yes yes 2;3 0.00083178 78.285 By MS/MS By MS/MS 1 2 24389000 10538000 13851000 420 1453 454 1040;1041;1042 854;855;856 856 3 DVQSPGFLNEPLSSK SATCKNIKDVQSPGFL LNEPLSSKSQRRKSLK K D V S K S 0 0 1 1 0 1 1 1 0 0 2 1 0 1 2 3 0 0 0 1 0 0 15 0 1616.8046 H0YCZ2;E9PPJ1;Q8NG31 H0YCZ2 92 106 CASC5 Protein CASC5 yes no 2 0.0014246 70.529 By MS/MS By matching 1 1 4703800 2741600 1962100 421 473 455 1043;1044 857 857 559 1 DVSLGTYGSR QDWEFQKRDVSLGTYG SLGTYGSRAAEPQEQE R D V S R A 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 2 1 0 1 1 0 0 10 0 1053.5091 Q9C0C2 Q9C0C2 934 943 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.011544 60.91 By MS/MS By matching 1 1 1105400 635370 470080 422 1385 456 1045;1046 858 858 1658 1 DVTIGGSAPIYVK LGFSITSRDVTIGGSA GSAPIYVKNILPRGAA R D V V K N 1 0 0 1 0 0 0 2 0 2 0 1 0 0 1 1 1 0 1 2 0 0 13 0 1318.7133 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8 Q5VWV2 435 447 PARD3 Partitioning defective 3 homolog yes no 2 0.0078364 61.593 By MS/MS By matching 1 1 588050 287640 300410 423 1178 457 1047;1048 859 859 2465 1 DVTMLMRKSWK TPKEGESRDVTMLMRK MLMRKSWKRSSKVILS R D V W K R 0 1 0 1 0 0 0 0 0 0 1 2 2 0 0 1 1 1 0 1 0 0 11 2 1393.721 H0Y8M9;H0Y9Y6;E5RJR1;Q6DN14 H0Y8M9 150 160 MCTP1 Multiple C2 and transmembrane domain-containing protein 1 yes no 2 0.01867 40.994 By MS/MS By matching 1 1 523250 385610 137650 424 394 458 1049;1050 860 860 66 0 DVTNFTVGGFAPMSPR LAGGSKPRDVTNFTVG GFAPMSPRISSPMHPS R D V P R I 1 1 1 1 0 0 0 2 0 0 0 0 1 2 2 1 2 0 0 2 0 0 16 0 1694.8086 O00267 O00267 653 668 SUPT5H Transcription elongation factor SPT5 yes yes 2 2.5608E-05 86.455 By MS/MS By MS/MS 1 1 8458000 4896000 3562000 425 753 459 1051;1052 861;862 862 114 873 2 DVVFLIDGSQSAGPEFQYVR SPGVGGKRDVVFLIDG GPEFQYVRTLIERLVD R D V V R T 1 1 0 2 0 2 1 2 0 1 1 0 0 2 1 2 0 0 1 3 0 0 20 0 2226.0957 E7ENL6;P12111 E7ENL6 626 645 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 0.00061559 102.73 By MS/MS By MS/MS 2 2 13421000 8082400 5338600 426 403 460 1053;1054;1055;1056 863;864;865 864 3 DVVLSIVNDLTIAESNCPR QDTFGRMRDVVLSIVN IAESNCPRGARVAVVT R D V P R G 1 1 2 2 1 0 1 0 0 2 2 0 0 0 1 2 1 0 0 3 0 0 19 0 2114.0678 E7ENL6;P12111 E7ENL6 1815 1833 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 1.2176E-27 107.74 By MS/MS By MS/MS 2 2 13292000 10209000 3082800 427 403 461 1057;1058;1059;1060 866;867;868;869;870 866 5 DVVLSTSPK RQGSWDSRDVVLSTSP VVLSTSPKLLATATAN R D V P K L 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 2 1 0 0 2 0 0 9 0 944.51786 A0A075B784;Q9P275 A0A075B784 576 584 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.00087737 109.66 By MS/MS By MS/MS 1 1 945750 573810 371940 428 10 462 1061;1062 871;872 872 6 2 DYDDMSPR RPMPPSRRDYDDMSPR DYDDMSPRRGPPPPPP R D Y P R R 0 1 0 3 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 8 0 997.38111 P61978;Q5T6W2 P61978 279 286 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0062041 132.32 By MS/MS By MS/MS 3 2 66512000 33849000 32663000 429 1018 463;464 1063;1064;1065;1066;1067 873;874;875;876;877 874 184 1166;2435 5 DYDEEEQGYDSEKEK KDVKQVTRDYDEEEQG GYDSEKEKKEEKKPIE R D Y E K K 0 0 0 3 0 1 5 1 0 0 0 2 0 0 0 1 0 0 2 0 0 0 15 1 1862.733 Q5T757;Q05519 Q5T757 364 378 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.00011737 89.911 By matching By MS/MS 1 1 6092600 3374300 2718300 430 1051 465 1068;1069 878 878 1200 1 DYDEEEQGYDSEKEKK KDVKQVTRDYDEEEQG YDSEKEKKEEKKPIET R D Y K K E 0 0 0 3 0 1 5 1 0 0 0 3 0 0 0 1 0 0 2 0 0 0 16 2 1990.828 Q5T757;Q05519 Q5T757 364 379 SRSF11 Serine/arginine-rich splicing factor 11 yes no 3 0.0026513 73.735 By matching By MS/MS 1 1 11075000 5809200 5266200 431 1051 466 1070;1071 879 879 1200 1 DYELLCLDGTR WAKNLNEKDYELLCLD LLCLDGTRKPVEEYAN K D Y T R K 0 1 0 2 1 0 1 1 0 0 3 0 0 0 0 0 1 0 1 0 0 0 11 0 1353.6235 P02787 P02787 577 587 TF Serotransferrin yes yes 2 0.015094 75.509 By matching By MS/MS 1 1 1446200 765210 681010 432 845 467 1072;1073 880 880 1 DYEPPSPSPAPGAPPPPPQR LCRPPLPRDYEPPSPS APPPPPQRNASYLKTQ R D Y Q R N 2 1 0 1 0 1 1 1 0 0 0 0 0 0 10 2 0 0 1 0 0 0 20 0 2052.9905 A8MQ02;J3KN01;P55196;H0Y8L4 A8MQ02 1648 1667 MLLT4 Afadin yes no 3 0.0039776 49.537 By matching By MS/MS 1 1 1580900 828130 752760 433 242 468 1074;1075 881 881 294;295 1 DYFEEYGKIDTIEIITDR DTEEHHLRDYFEEYGK TIEIITDRQSGKKRGF R D Y D R Q 0 1 0 3 0 0 3 1 0 4 0 1 0 1 0 0 2 0 2 0 0 0 18 1 2219.0634 A0A087WUI2;P22626 A0A087WUI2 130 147 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3 0.012445 39.849 By MS/MS 1 1105100 1105100 0 434 27 469 1076 882 882 1 DYNNIGKFLNR SGILTLDKDYNNIGKF NIGKFLNRILGMEVHQ K D Y N R I 0 1 3 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 11 1 1352.6837 A3KN83 A3KN83 1099 1109 SBNO1 Protein strawberry notch homolog 1 yes yes 2 0.016778 57.598 By MS/MS 1 2999400 2999400 0 435 228 470 1077 883 883 2288 1 DYSGEMEGKHSQILKLSK WQLITHPRDYSGEMEG SQILKLSKLTPGLYEF R D Y S K L 0 0 0 1 0 1 2 2 1 1 2 3 1 0 0 3 0 0 1 0 0 0 18 2 2049.0201 H0Y4S8;B1AN15;E7EN73;Q8IZA0 H0Y4S8 184 201 KIAA0319L Dyslexia-associated protein KIAA0319-like protein yes no 3 0.017444 44.294 By MS/MS 1 0 0 0 436 254 471 1078 884 884 44 2294 1 DYSPSRNPPEVEAR GLGPGEARDYSPSRNP NPPEVEAR________ R D Y A R - 1 2 1 1 0 0 2 0 0 0 0 0 0 0 3 2 0 0 1 1 0 0 14 1 1615.759 Q9HCM7 Q9HCM7 1032 1045 FBRSL1 Fibrosin-1-like protein yes yes 3 0.00012051 86.262 By matching By MS/MS 1 1 1359400 718820 640580 437 1410 472 1079;1080 885 885 1704 1 DYTGCSTSESLSPVK YRRKNSKRDYTGCSTS SESLSPVKQAPRKSPS R D Y V K Q 0 0 0 1 1 0 1 1 0 0 1 1 0 0 1 4 2 0 1 1 0 0 15 0 1629.7192 O95297 O95297 199 213 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.0012494 74.966 By MS/MS By MS/MS 1 1 3212000 1687800 1524200 438 818 473 1081;1082 886;887 886 965 2 DYVEKEHLQLSHQK ALRILLSKDYVEKEHL HLQLSHQKLSQLQEEF K D Y Q K L 0 0 0 1 0 2 2 0 2 0 2 2 0 0 0 1 0 0 1 1 0 0 14 1 1752.8795 B8ZZB3;E7ERF0;Q6ZP82 B8ZZB3 320 333 CCDC141 Coiled-coil domain-containing protein 141 yes no 2 0.0046438 58.699 By matching By MS/MS 1 1 1175500 740610 434850 439 299 474 1083;1084 888 888 2307 0 EAAENSLVAYK FATGNDRKEAAENSLV ENSLVAYKAASDIAMT K E A Y K A 3 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 11 0 1193.5928 P62258;K7EM20 P62258 143 153 YWHAE 14-3-3 protein epsilon yes no 2 0.001229 96.034 By MS/MS By matching 1 1 1055600 700670 354920 440 1022 475 1085;1086 889 889 1 EAALPPVSPLK RGRDAVKREAALPPVS LPPVSPLKAALSEEEL R E A L K A 2 0 0 0 0 0 1 0 0 0 2 1 0 0 3 1 0 0 0 1 0 0 11 0 1120.6492 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1061 1071 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 8.0721E-14 145.14 By MS/MS By MS/MS 1 1 14997000 7529700 7467500 441 426 476 1087;1088 890;891;892;893;894;895;896;897;898 895 493 9 EAARSPDKPGGSPSASR QAETREAREAARSPDK GGSPSASRRKGRASEH R E A S R R 3 2 0 1 0 0 1 2 0 0 0 1 0 0 3 4 0 0 0 0 0 0 17 2 1668.818 Q9Y3T9 Q9Y3T9 45 61 NOC2L Nucleolar complex protein 2 homolog yes yes 3 0.018459 48.216 By matching By MS/MS 1 1 37282000 19752000 17530000 442 1507 477 1089;1090 899 899 1852;1853 1 EADDDEEVDDNIPEMPSPK RCPNMAMKEADDDEEV IPEMPSPKKMHQGKKK K E A P K K 1 0 1 5 0 0 4 0 0 1 0 1 1 0 3 1 0 0 0 1 0 0 19 0 2143.8739 P26358 P26358 698 716 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 9.0262E-22 110.34 By MS/MS By MS/MS 1 1 12898000 6626300 6272200 443 931 478 1091;1092 900;901 901 1049 2 EADSSSDYVNMDFTK QKPTHEQREADSSSDY YVNMDFTKRESNTPAP R E A T K R 1 0 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 15 0 1707.6934 O14654 O14654 914 928 IRS4 Insulin receptor substrate 4 yes yes 2 0.0022465 63.76 By MS/MS By matching 1 1 8960000 3154400 5805700 444 761 479 1093;1094 902 902 2376 1 EADSSSDYVNMDFTKR QKPTHEQREADSSSDY VNMDFTKRESNTPAPS R E A K R E 1 1 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 16 1 1863.7945 O14654 O14654 914 929 IRS4 Insulin receptor substrate 4 yes yes 2;3 0.00077198 82.651 By MS/MS By MS/MS 3 2 39126000 26044000 13082000 445 761 480;481 1095;1096;1097;1098;1099 903;904;905;906 906 117 2376 2 EAEAAIYHLQLFEELR RMQHLIAREAEAAIYH LQLFEELRRLAPITSD R E A L R R 3 1 0 0 0 1 4 0 1 1 3 0 0 1 0 0 0 0 1 0 0 0 16 0 1930.9789 B4DNK4;P14618 B4DNK4 310 325 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2;3 1.6488E-11 106.52 By MS/MS By MS/MS 2 2 5786600 3932200 1854300 446 266 482 1100;1101;1102;1103 907;908;909 907 3 EAEALLQLNGDFLVR FHGKLSRREAEALLQL LNGDFLVRESTTTPGQ R E A V R E 2 1 1 1 0 1 2 1 0 0 4 0 0 1 0 0 0 0 0 1 0 0 15 0 1686.8941 P29353;H0Y539;X6R6D0 P29353 497 511 SHC1 SHC-transforming protein 1 yes no 2 8.0305E-58 161.99 By MS/MS By matching 1 1 5349800 3783000 1566800 447 938 483 1104;1105 910 910 1 EAEEGPTGASESQDSPR PAPPSKPKEAEEGPTG SESQDSPRKLKYEEPE K E A P R K 2 1 0 1 0 1 4 2 0 0 0 0 0 0 2 3 1 0 0 0 0 0 17 0 1745.734 H0Y507;Q5TCZ1 H0Y507 460 476 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.011653 46.892 By MS/MS By matching 1 1 499710 267680 232030 448 589 484 1106;1107 911 911 706 1 EAEFSDPENTR QSVGRQEKEAEFSDPE FSDPENTRTKKEQDWE K E A T R T 1 1 1 1 0 0 3 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 11 0 1293.5473 Q5T481 Q5T481 872 882 RBM20 RNA-binding protein 20 yes yes 2 0.0062572 65.809 By MS/MS By MS/MS 1 1 3013500 1503800 1509700 449 1168 485 1108;1109 912;913 913 1372 2 EAGSPAQEFK NSSEEEAREAGSPAQE GSPAQEFKYQKSLPPR R E A F K Y 2 0 0 0 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 10 0 1062.4982 Q5JSZ5;Q5JT00 Q5JSZ5 610 619 PRRC2B Protein PRRC2B yes no 2 0.011627 60.691 By MS/MS By matching 1 1 1880800 927880 952870 450 1158 486 1110;1111 914 914 1349 1 EAIIPGSVYDR TTAMYDAREAIIPGSV IPGSVYDRSSQGRPSS R E A D R S 1 1 0 1 0 0 1 1 0 2 0 0 0 0 1 1 0 0 1 1 0 0 11 0 1218.6245 Q92900 Q92900 950 960 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.0016503 86.136 By MS/MS By matching 1 1 1088800 528420 560400 451 1316 487 1112;1113 915 915 2484 1 EALAEAALESPRPALVR HPEQENSREALAEAAL SPRPALVRSASSDTSE R E A V R S 5 2 0 0 0 0 3 0 0 0 3 0 0 0 2 1 0 0 0 1 0 0 17 1 1791.9843 J3QRP6;O14745 J3QRP6 152 168 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 3 0.0013863 62.035 By MS/MS By MS/MS 1 1 4104900 2374400 1730500 452 717 488 1114;1115 916;917 916 842 2 EALAIVFFGR RGSPPPAREALAIVFF LAIVFFGRQPQPNVSE R E A G R Q 2 1 0 0 0 0 1 1 0 1 1 0 0 2 0 0 0 0 0 1 0 0 10 0 1121.6233 Q16853 Q16853 123 132 AOC3 Membrane primary amine oxidase yes yes 2 0.00033169 130.22 By MS/MS 1 1645800 0 1645800 453 1139 489 1116 918 918 1 EALGLGPPAAQLTPPPAPVGLR LGPAGGDREALGLGPP PPAPVGLRGSGLRGLQ R E A L R G 4 1 0 0 0 1 1 3 0 0 4 0 0 0 6 0 1 0 0 1 0 0 22 0 2121.1946 A0A087WZ13;E9PAU2;Q8IY67 A0A087WZ13 451 472 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 3 0.0083299 69.256 By MS/MS By matching 1 1 1752300 1662300 89944 454 59 490 1117;1118 919 919 1905 1 EALQDVEDENQ GDGEEQNKEALQDVED QDVEDENQ________ K E A N Q - 1 0 1 2 0 2 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1288.5419 P62258;I3L0W5 P62258 245 255 YWHAE 14-3-3 protein epsilon yes no 2 0.0025003 82.75 By matching By MS/MS 1 1 10254000 5015100 5238800 455 1022 491 1119;1120 920 920 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK AGASPVEKEAPAEGEA ASSTSSPKAEDGATPS K E A P K A 10 0 0 0 0 0 6 3 0 0 0 1 0 0 4 6 2 0 0 0 0 0 32 0 2914.2952 P29966 P29966 106 137 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 1.3073E-25 90.71 By MS/MS By MS/MS 1 1 53318000 33395000 19923000 456 939 492 1121;1122 921;922;923;924 924 1059 4 EAQAQQSQNVIDPNKER E A E R 2 1 2 1 0 4 2 0 0 1 0 1 0 0 1 1 0 0 0 1 0 0 17 1 1953.9504 REV__O95376 yes yes 2 1.6999E-05 66.663 By MS/MS 1 483490 0 483490 + 457 1534 493 1123 925 925 0 EASRPPEEPSAPSPTLPAQFK TPPAPSSREASRPPEE PTLPAQFKQRAPMYNS R E A F K Q 3 1 0 0 0 1 3 0 0 0 1 1 0 1 6 3 1 0 0 0 0 0 21 1 2235.1172 H0Y3X6;A0A0C4DFX9;Q9H3P2 H0Y3X6 355 375 NELFA Negative elongation factor A yes no 3 0.010245 44.641 By matching By MS/MS 1 1 10797000 5854600 4942300 458 144 494 1124;1125 926 926 180 1 EDGGGWWYNR DPRKQCSKEDGGGWWY GGGWWYNRCHAANPNG K E D N R C 0 1 1 1 0 0 1 3 0 0 0 0 0 0 0 0 0 2 1 0 0 0 10 0 1238.5105 D6REL8;P02675;CON__P02676 D6REL8 208 217 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 2 0.0037555 77.923 By MS/MS By matching 1 1 2739600 1906700 832970 459 376 495 1126;1127 927 927 1 EDGGYTFTATPEDFPKK RVFKMTKREDGGYTFT TPEDFPKKHKAPV___ R E D K K H 1 0 0 2 0 0 2 2 0 0 0 2 0 2 2 0 3 0 1 0 0 0 17 1 1901.8683 A0A087WXC6;E9PF19;Q96E41;Q9Y4P3 A0A087WXC6 75 91 TBL2 Transducin beta-like protein 2 yes no 2 0.0083081 55.452 By MS/MS 1 0 0 0 460 49 496 1128 928 928 1900;1901 1 EDGNEEDKENQGDETQGQQPPQRR PPRQRQPREDGNEEDK GQQPPQRRYRRNFNYR R E D R R Y 0 2 2 3 0 5 5 3 0 0 0 1 0 0 2 0 1 0 0 0 0 0 24 2 2783.1979 H0Y449;P67809 H0Y449 307 330 YBX1 Nuclease-sensitive element-binding protein 1 yes no 4 0.0032937 42.639 By MS/MS 1 1475500 1475500 0 461 584 497 1129 929 929 1 EDQTEYLEER TKVILHLKEDQTEYLE QTEYLEERRVKEVVKK K E D E R R 0 1 0 1 0 1 4 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1310.5626 P08238;Q58FF7;Q58FF6;P07900;G3V2J8 P08238 187 196 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha no no 2 0.00031279 96.331 By MS/MS By matching 1 1 2989800 1319500 1670300 462 871;868 498 1130;1131 930 930 1 EDSGLFSPIR PRPVKASREDSGLFSP SGLFSPIRSSAFSPLG R E D I R S 0 1 0 1 0 0 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1119.556 Q9UKA4 Q9UKA4 442 451 AKAP11 A-kinase anchor protein 11 yes yes 2 0.0016985 81.709 By MS/MS By MS/MS 1 1 3257500 1819900 1437600 463 1463 499 1132;1133 931;932 931 1769 2 EDVEVAESPLR SPPLLCTREDVEVAES EVAESPLRVLAETPDS R E D L R V 1 1 0 1 0 0 3 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 11 0 1242.6092 J3KMX1;Q99567 J3KMX1 449 459 NUP88 Nuclear pore complex protein Nup88 yes no 2 6.7099E-09 137.95 By MS/MS By matching 1 1 6379500 3639700 2739800 464 698 500 1134;1135 933 933 825 1 EDYLLSVRK VTLSDEMREDYLLSVR DYLLSVRKSIVDFVLK R E D R K S 0 1 0 1 0 0 1 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 9 1 1121.6081 Q8WXX0 Q8WXX0 212 220 DNAH7 Dynein heavy chain 7, axonemal yes yes 2 0.017629 46.994 By MS/MS 1 0 0 0 465 1295 501 1136 934 934 2479 1 EEADYSAFGTDTLIK LRIFIQKKEEADYSAF FGTDTLIKKKNVLTNV K E E I K K 2 0 0 2 0 0 2 1 0 1 1 1 0 1 0 1 2 0 1 0 0 0 15 0 1658.7675 Q9BYG5 Q9BYG5 97 111 PARD6B Partitioning defective 6 homolog beta yes yes 2 0.0013792 61.419 By matching By MS/MS 1 1 1304200 548300 755930 466 1381 502 1137;1138 935 935 1647 1 EEASDDDMEGDEAVVR EDVYGEVREEASDDDM EGDEAVVRCTLSANLV R E E V R C 2 1 0 4 0 0 4 1 0 0 0 0 1 0 0 1 0 0 0 2 0 0 16 0 1765.6949 O75643 O75643 222 237 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.2755E-35 146.84 By MS/MS By MS/MS 2 2 45135000 21105000 24031000 467 801 503;504 1139;1140;1141;1142 936;937;938 936 126 943 3 EEDEEPESPPEKK KEKTPSPKEEDEEPES PESPPEKKTSTSPPPE K E E K K T 0 0 0 1 0 0 6 0 0 0 0 2 0 0 3 1 0 0 0 0 0 0 13 1 1541.6733 Q9H1E3 Q9H1E3 207 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 6.9068E-14 138.02 By MS/MS By MS/MS 1 1 3534100 1521700 2012300 468 1393 505 1143;1144 939;940;941;942;943;944 939 1676 6 EEDGADASEEDLTR EEDVKDTREEDGADAS ASEEDLTRARQEEGAD R E E T R A 2 1 0 3 0 0 4 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 14 0 1535.6223 E5RHA3;Q86X53 E5RHA3 137 150 ERICH1 Glutamate-rich protein 1 yes no 2 2.2506E-05 68.978 By MS/MS By MS/MS 1 1 2324000 1033300 1290700 469 387 506 1145;1146 945;946 945 1969 0 EEHGGLIRSPR KPLTRGAKEEHGGLIR GGLIRSPRHEKKKKVR K E E P R H 0 2 0 0 0 0 2 2 1 1 1 0 0 0 1 1 0 0 0 0 0 0 11 1 1249.6527 P26368 P26368 71 81 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 3 0.011925 54.199 By MS/MS 1 17924000 0 17924000 470 932 507 1147 947 947 1050 1 EELMSSDLEETAGSTSIPK KKKKSFSKEELMSSDL AGSTSIPKRKKSTPKE K E E P K R 1 0 0 1 0 0 4 1 0 1 2 1 1 0 1 4 2 0 0 0 0 0 19 0 2022.9303 O00567 O00567 515 533 NOP56 Nucleolar protein 56 yes yes 2 0.0026079 60.448 By MS/MS By MS/MS 2 2 5492100 2282200 3209900 471 757 508;509 1148;1149;1150;1151 948;949 949 115 878;879 2 EEPVSSGPEEAVGK KKKRKFSKEEPVSSGP GPEEAVGKSSSKKKKK K E E G K S 1 0 0 0 0 0 4 2 0 0 0 1 0 0 2 2 0 0 0 2 0 0 14 0 1413.6624 O00567 O00567 565 578 NOP56 Nucleolar protein 56 yes yes 2 0.00016956 86.756 By MS/MS By MS/MS 1 1 2937700 1532800 1404900 472 757 510 1152;1153 950;951 950 880;881 2 EEQEYEEEVEEEPRPAAK RVTEGTIREEQEYEEE EEPRPAAKVVEREEAV R E E A K V 2 1 0 0 0 1 9 0 0 0 0 1 0 0 2 0 0 0 1 1 0 0 18 1 2189.9601 O43491;H0Y5B0;E9PK52;E9PHY5;E9PMV8;Q6R5J7 O43491 769 786 EPB41L2 Band 4.1-like protein 2 yes no 3 0.0020935 72.428 By matching By MS/MS 1 1 2460900 1313800 1147100 473 783 511 1154;1155 952 952 2387 1 EEQTDTSDGESVTHHIR RSGSRERREEQTDTSD ESVTHHIRRLNQQPSQ R E E I R R 0 1 0 2 0 1 3 1 2 1 0 0 0 0 0 2 3 0 0 1 0 0 17 0 1939.8508 A2AB27;P36915 A2AB27 43 59 GNL1 Guanine nucleotide-binding protein-like 1 yes no 3 0.0094831 61.139 By MS/MS By matching 1 1 12229000 7488500 4740800 474 226 512 1156;1157 953 953 280;1939;1940 1 EESDGEYDEFGR ENVEYIEREESDGEYD GEYDEFGRKKKKYRGK R E E G R K 0 1 0 2 0 0 4 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 12 0 1431.5426 O95218 O95218 118 129 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.00093284 84.17 By matching By MS/MS 1 1 2423800 1243200 1180600 475 812 513 1158;1159 954 954 957 1 EFCNLSLSERSR PKLEDAMKEFCNLSLS LSLSERSRQSYLIGLT K E F S R Q 0 2 1 0 1 0 2 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 12 1 1496.7042 Q86UK0 Q86UK0 620 631 ABCA12 ATP-binding cassette sub-family A member 12 yes yes 2 0.0040401 56.729 By matching By MS/MS 1 1 3259300 1670800 1588500 476 1230 514 1160;1161 955 955 1446;1447;1448 1 EFHLNESGDPSSK FENKVLSKEFHLNESG ESGDPSSKSTEIKWKS K E F S K S 0 0 1 1 0 0 2 1 1 0 1 1 0 1 1 3 0 0 0 0 0 0 13 0 1445.6423 Q01105;A0A0C4DFV9;A0A087X027;P0DME0 Q01105 155 167 SET;SETSIP Protein SET;Protein SETSIP yes no 3 0.004877 51.009 By MS/MS By matching 1 1 785250 514000 271250 477 1037 515 1162;1163 956 956 1 EFITGDVEPTDAESEWHSENEEEEK QPLFDKRREFITGDVE SENEEEEKL_______ R E F E K L 1 0 1 2 0 0 9 1 1 1 0 1 0 1 1 2 2 1 0 1 0 0 25 0 2935.2156 E9PS34;E9PNJ7;A8MXH2;E9PKT8;C9J6D1;C9JZI7;Q99733 E9PS34 108 132 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 3 2.8516E-06 78.418 By MS/MS By MS/MS 1 1 25203000 12464000 12740000 478 245 516 1164;1165 957;958 958 300;301 2 EFNAETFTFHADICTLSEK VDETYVPKEFNAETFT DICTLSEKERQIKKQT K E F E K E 2 0 1 1 1 0 3 0 1 1 1 1 0 3 0 1 3 0 0 0 0 0 19 0 2259.0154 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 525 543 ALB Serum albumin yes no 3 0.0012294 57.173 By MS/MS By matching 1 1 3694200 2201100 1493100 + 479 152 517 1166;1167 959 959 1 EGEEPTVYSDEEEPKDESAR HHVGKLLKEGEEPTVY EPKDESARKND_____ K E G A R K 1 1 0 2 0 0 7 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 20 1 2294.9663 O00264 O00264 173 192 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 0.0024719 58.516 By MS/MS By matching 1 1 698730000 411620000 287110000 480 752 518 1168;1169 960 960 870;2072 1 EGEEPTVYSDEEEPKDESARK HHVGKLLKEGEEPTVY PKDESARKND______ K E G R K N 1 1 0 2 0 0 7 1 0 0 0 2 0 0 2 2 1 0 1 1 0 0 21 2 2423.0612 O00264 O00264 173 193 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3;4 3.6032E-57 142.4 By MS/MS By MS/MS 2 1 142010000 112650000 29359000 481 752 519 1170;1171;1172 961;962;963 961 870;2072 3 EGKMSRQNLV EGFAGLKKEGKMSRQN KMSRQNLV________ K E G L V - 0 1 1 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 0 1 0 0 10 2 1160.5972 H7C1Y4 H7C1Y4 36 45 LMBR1 yes yes 2 0.005594 57.177 By MS/MS 1 0 0 0 482 677 520 1173 964 964 109 800 1 EGNTTEDDFPSSPGNGNK TSGSGFHREGNTTEDD SSPGNGNKSSNSSEER R E G N K S 0 0 3 2 0 0 2 3 0 0 0 1 0 1 2 2 2 0 0 0 0 0 18 0 1864.7711 Q15007 Q15007 295 312 WTAP Pre-mRNA-splicing regulator WTAP yes yes 2 0.010506 47.537 By MS/MS By MS/MS 1 1 7860800 4854100 3006700 483 1112 521 1174;1175 965;966 965 1299 2 EGPEPPEEVPPPTTPPVPK VEPQLPSKEGPEPPEE PTTPPVPKVEPKGDGI K E G P K V 0 0 0 0 0 0 4 1 0 0 0 1 0 0 9 0 2 0 0 2 0 0 19 0 1993.0044 P48634 P48634 597 615 PRRC2A Protein PRRC2A yes yes 2 0.013529 58.159 By MS/MS By matching 1 1 2825000 2553500 271500 484 973 522 1176;1177 967 967 1 EGSHSPLDSADVR PDAERRPREGSHSPLD PLDSADVRVHVPRTSI R E G V R V 1 1 0 2 0 0 1 1 1 0 1 0 0 0 1 3 0 0 0 1 0 0 13 0 1368.627 A0A0A0MRC4;A0A0A0MSK4;Q86YR5 A0A0A0MRC4 445 457 GPSM1 G-protein-signaling modulator 1 yes no 2 0.0053391 60.157 By matching By MS/MS 1 1 1877500 1255600 621910 485 100 523 1178;1179 968 968 124 1 EGSPAPLEPEPGAAQPK QTPESLSREGSPAPLE EPGAAQPKLAVIQEAR R E G P K L 3 0 0 0 0 1 3 2 0 0 1 1 0 0 5 1 0 0 0 0 0 0 17 0 1673.8261 Q01167 Q01167 396 412 FOXK2 Forkhead box protein K2 yes yes 2 0.010182 48.177 By matching By MS/MS 1 1 9712900 5039400 4673500 486 1039 524 1180;1181 969 969 1183 1 EGSPIPHDPEFGSK QTPECLSREGSPIPHD HDPEFGSKLASVPEYR R E G S K L 0 0 0 1 0 0 2 2 1 1 0 1 0 1 3 2 0 0 0 0 0 0 14 0 1495.6943 P85037 P85037 443 456 FOXK1 Forkhead box protein K1 yes yes 2;3 0.0023349 58.071 By MS/MS By MS/MS 2 2 18751000 10235000 8515900 487 1034 525 1182;1183;1184;1185 970;971;972 971 1175 3 EGSTQQLQTTSPK FIKVYWHREGSTQQLQ QLQTTSPKPLVQQPIL R E G P K P 0 0 0 0 0 3 1 1 0 0 1 1 0 0 1 2 3 0 0 0 0 0 13 0 1403.6892 A0A087X0H9;Q5T8P6 A0A087X0H9 611 623 RBM26 RNA-binding protein 26 yes no 2 0.011097 71.558 By matching By MS/MS 1 1 1516700 930550 586170 488 70 526 1186;1187 973 973 1908 1 EGVLYVGSK AEAAGKTKEGVLYVGS GVLYVGSKTKEGVVHG K E G S K T 0 0 0 0 0 0 1 2 0 0 1 1 0 0 0 1 0 0 1 2 0 0 9 0 950.5073 D6RA31;E7EPV7;Q16143;P37840 D6RA31 35 43 SNCA;SNCB Alpha-synuclein;Beta-synuclein yes no 2 0.0075831 78.113 By matching By MS/MS 1 1 819040 424070 394970 489 366 527 1188;1189 974 974 2324 1 EGVTPWASFKK TSDGEKKREGVTPWAS TPWASFKKMVTPKKRV R E G K K M 1 0 0 0 0 0 1 1 0 0 0 2 0 1 1 1 1 1 0 1 0 0 11 1 1248.6503 Q02952 Q02952 605 615 AKAP12 A-kinase anchor protein 12 yes yes 2 2.525E-05 114.24 By MS/MS By MS/MS 1 1 16859000 9636300 7222600 490 1045 528 1190;1191 975;976 976 1193 2 EGWAPASYLKKAK WYIRYLGKEGWAPASY ASYLKKAKDDLPTRKK K E G A K D 3 0 0 0 0 0 1 1 0 0 1 3 0 0 1 1 0 1 1 0 0 0 13 2 1447.7823 H0Y507;Q5TCZ1 H0Y507 239 251 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 3 0.001709 63.662 By MS/MS By matching 1 1 64107000 38378000 25730000 491 589 529 1192;1193 977 977 707;2356 1 EGYYGYTGAFR NLCEPNNKEGYYGYTG YGYTGAFRCLVEKGDV K E G F R C 1 1 0 0 0 0 1 3 0 0 0 0 0 1 0 0 1 0 3 0 0 0 11 0 1282.5619 P02787;H7C5E8 P02787 531 541 TF Serotransferrin yes no 2 0.0047846 72.643 By MS/MS By MS/MS 1 1 3330200 2105300 1224900 492 845 530 1194;1195 978;979 979 2 EHALLAYTLGVK ISKNGQTREHALLAYT LAYTLGVKQLIVGVNK R E H V K Q 2 0 0 0 0 0 1 1 1 0 3 1 0 0 0 0 1 0 1 1 0 0 12 0 1313.7343 Q5VTE0;P68104;A0A087WV01;Q05639 Q5VTE0 135 146 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 yes no 2 0.00794 68.626 By MS/MS 1 559610 559610 0 493 1029 531 1196 980 980 1 EHIEIIAPSPQR RMDPFATKEHIEIIAP IIAPSPQRSRSFSVGI K E H Q R S 1 1 0 0 0 1 2 0 1 3 0 0 0 0 2 1 0 0 0 0 0 0 12 0 1388.7412 C9J185;E7ER02;Q9NZJ5 C9J185 586 597 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 yes no 2 0.0059448 62.891 By MS/MS By matching 1 1 640370 344460 295900 494 315 532 1197;1198 981 981 380 1 EHIVDLEMLTVSSIGTFR VKSLSGPREHIVDLEM VSSIGTFRTSSVLRLT R E H F R T 0 1 0 1 0 0 2 1 1 2 2 0 1 1 0 2 2 0 0 2 0 0 18 0 2046.0456 A0A0U1RQV3;Q12805 A0A0U1RQV3 247 264 EFEMP1 EGF-containing fibulin-like extracellular matrix protein 1 yes no 3 5.5568E-29 127.2 By MS/MS By MS/MS 1 1 4004100 2759800 1244300 495 198 533 1199;1200 982;983 982 33 2 EHSLQVSPSLEK PSLHSFIKEHSLQVSP QVSPSLEKGAKADTGL K E H E K G 0 0 0 0 0 1 2 0 1 0 2 1 0 0 1 3 0 0 0 1 0 0 12 0 1352.6936 O95235 O95235 526 537 KIF20A Kinesin-like protein KIF20A yes yes 2;3 0.00051658 98.368 By MS/MS By MS/MS 2 2 4027300 2323500 1703900 496 814 534 1201;1202;1203;1204 984;985;986;987 986 961 4 EIAQDFKTDLR LPFQRLVREIAQDFKT QDFKTDLRFQSAAIGG R E I L R F 1 1 0 2 0 1 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 11 1 1334.683 K7EMV3;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431 K7EMV3 74 84 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2 0.0032458 72.643 By MS/MS 1 479540 479540 0 497 262 535 1205 988 988 1 EIESEIDSEEELINK ELVNWYLKEIESEIDS SEEELINKKRIIEKVI K E I N K K 0 0 1 1 0 0 6 0 0 3 1 1 0 0 0 2 0 0 0 0 0 0 15 0 1775.8313 Q14566 Q14566 755 769 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.0016454 67.648 By MS/MS By matching 1 1 1268500 774630 493900 498 1101 536 1206;1207 989 989 1275 1 EIEYVETVTSR NALKYEHKEIEYVETV YVETVTSRQSEIQKFI K E I S R Q 0 1 0 0 0 0 3 0 0 1 0 0 0 0 0 1 2 0 1 2 0 0 11 0 1324.6511 Q9UHR4 Q9UHR4 160 170 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 0.0045029 72.607 By MS/MS 1 805190 805190 0 499 1458 537 1208 990 990 2507 1 EIFSGSLR EDGIKREREIFSGSLR EIFSGSLRTQTHPTEE R E I L R T 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 2 0 0 0 0 0 0 8 0 907.47633 Q68DQ2 Q68DQ2 172 179 CRYBG3 Very large A-kinase anchor protein yes yes 2 0.0075248 86.898 By MS/MS 1 0 0 0 500 1184 538 1209 991 991 1392 1 EIIDLVLDR RGHYTIGKEIIDLVLD IIDLVLDRIRKLADQC K E I D R I 0 1 0 2 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1084.6128 Q71U36;P68363;F5H5D3;Q9BQE3;F8VRZ4;F8VS66;F8VQQ4;F8VVB9 Q71U36 113 121 TUBA1A;TUBA1B;TUBA1C Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-1C chain yes no 2 0.00019739 106.68 By matching By MS/MS 1 1 6330400 4129100 2201300 501 1030 539 1210;1211 992 992 1 EIPSATQSPISK KLEKKDAKEIPSATQS ATQSPISKKRKKKGFL K E I S K K 1 0 0 0 0 1 1 0 0 2 0 1 0 0 2 3 1 0 0 0 0 0 12 0 1256.6612 I3L1L3;Q9BQG0 I3L1L3 1076 1087 MYBBP1A Myb-binding protein 1A yes no 2 0.00076495 96.371 By MS/MS By MS/MS 1 1 22235000 12079000 10157000 502 690 540 1212;1213 993;994;995 993 815 3 EIQNGNLHESDSESVPR EKKKNKKKEIQNGNLH SDSESVPRDFKLSDAL K E I P R D 0 1 2 1 0 1 3 1 1 1 1 0 0 0 1 3 0 0 0 1 0 0 17 0 1909.8766 Q86UP2 Q86UP2 66 82 KTN1 Kinectin yes yes 2;3 0.00076207 83.314 By MS/MS By MS/MS 6 6 84769000 46609000 38159000 503 1231 541;542 1214;1215;1216;1217;1218;1219;1220;1221;1222;1223;1224;1225 996;997;998;999;1000;1001;1002;1003;1004 1004 39 1449;1450 9 EISPDTTLLDLQNNDISELRK LGLKSVPKEISPDTTL NDISELRKDDFKGLQH K E I R K D 0 1 2 3 0 1 2 0 0 2 4 1 0 0 1 2 2 0 0 0 0 0 21 1 2413.2336 P21810;C9JKG1 P21810 87 107 BGN Biglycan yes no 3 0.0032622 46.131 By MS/MS By matching 1 1 736590 511020 225560 504 921 543 1226;1227 1005 1005 1 EISPGSGPGEIR ITEEMNGKEISPGSGP GSGPGEIRKVEPVTQK K E I I R K 0 1 0 0 0 0 2 3 0 2 0 0 0 0 2 2 0 0 0 0 0 0 12 0 1197.599 O43491;H0Y5B0;E9PK52;E9PHY5;E9PMV8;Q6R5J7;E9PMG5 O43491 713 724 EPB41L2 Band 4.1-like protein 2 yes no 2 0.00070557 91.636 By MS/MS By MS/MS 2 2 5014100 2515800 2498300 505 783 544 1228;1229;1230;1231 1006;1007;1008 1008 910;911 3 EITALAPSTMK GIADRMQKEITALAPS ALAPSTMKIKIIAPPE K E I M K I 2 0 0 0 0 0 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 0 11 0 1160.6111 P63261;P60709;A6NL76;P68133;P68032;P63267;P62736 P63261 316 326 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 2 0.0010276 85.862 By MS/MS By matching 2 2 4132600 3117600 1015100 506 1017 545;546 1232;1233;1234;1235 1009;1010 1009 183 2 EKEISDDEAEEEKGEK TLYLEKEREKEISDDE AEEEKGEKEEEDKDDE R E K E K E 1 0 0 2 0 0 7 1 0 1 0 3 0 0 0 1 0 0 0 0 0 0 16 2 1863.8222 P08238 P08238 222 237 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.0028976 65.287 By MS/MS By MS/MS 2 1 3173800 2214500 959260 507 871 547 1236;1237;1238 1011;1012 1012 999 2 EKEVDGLLTSEPMGSPVSSK LKEEPKGKEKEVDGLL MGSPVSSKTESVSDKE K E K S K T 0 0 0 1 0 0 3 2 0 0 2 2 1 0 2 4 1 0 0 2 0 0 20 1 2089.0249 H3BUF6;Q8WWM7 H3BUF6 586 605 ATXN2L Ataxin-2-like protein yes no 2;3 0.0098236 50.806 By matching By MS/MS 2 2 4639200 2754800 1884400 508 667 548 1239;1240;1241;1242 1013;1014 1013 784 2 EKLQEEGGGSDEEETGSPSEDGMQSAR KRLIAEAKEKLQEEGG EDGMQSARTQARPREP K E K A R T 1 1 0 2 0 2 7 5 0 0 1 1 1 0 1 4 1 0 0 0 0 0 27 1 2838.1734 Q13610 Q13610 41 67 PWP1 Periodic tryptophan protein 1 homolog yes yes 3 3.995E-25 94.276 By MS/MS By matching 1 1 16134000 7436800 8696800 509 1089 549 1243;1244 1015 1015 1257 1 EKLQSFDSPER KGRGNDRREKLQSFDS QSFDSPERKRIKYSRE R E K E R K 0 1 0 1 0 1 2 0 0 0 1 1 0 1 1 2 0 0 0 0 0 0 11 1 1334.6466 E9PGM9;P78332 E9PGM9 886 896 RBM6 RNA-binding protein 6 yes no 2 0.0009563 92.039 By MS/MS By MS/MS 1 1 4604100 2470700 2133400 510 447 550 1245;1246 1016;1017 1016 523 2 EKTPELPEPSVK PSPAPEKKEKTPELPE ELPEPSVKVKEPSVQE K E K V K V 0 0 0 0 0 0 3 0 0 0 1 2 0 0 3 1 1 0 0 1 0 0 12 1 1352.7187 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 218 229 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 5.5774E-76 171.99 By MS/MS By MS/MS 2 2 23912000 13258000 10654000 511 247 551 1247;1248;1249;1250 1018;1019;1020;1021;1022;1023 1020 1943 6 EKTPSPKEEDEEPESPPEK PTASKASKEKTPSPKE EPESPPEKKTSTSPPP K E K E K K 0 0 0 1 0 0 7 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 19 2 2180.9961 Q9H1E3 Q9H1E3 200 218 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0034329 73.252 By MS/MS By matching 1 1 2757100 1896300 860790 512 1393 552 1251;1252 1024 1024 1676 1 ELAEDGYSGVEVR ELNEFLTRELAEDGYS GYSGVEVRVTPTRTEI R E L V R V 1 1 0 1 0 0 3 2 0 0 1 0 0 0 0 1 0 0 1 2 0 0 13 0 1422.6627 P23396;F2Z2S8;H0YF32;H0YCJ7;E9PPU1;H0YEU2;E9PL09;E9PQ96;E9PJH4;E9PK82 P23396 28 40 RPS3 40S ribosomal protein S3 yes no 2 4.5307E-06 74.944 By MS/MS By matching 1 1 1566900 1057200 509720 513 927 553 1253;1254 1025 1025 0 ELAEQTLNNIK ALIVEPSRELAEQTLN EQTLNNIKQFKKYIDN R E L I K Q 1 0 2 0 0 1 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 0 1271.6721 F1T0B3;A0A087X2G1;Q92499 F1T0B3 216 226 DDX1 ATP-dependent RNA helicase DDX1 yes no 2 0.0035963 76.943 By MS/MS By MS/MS 1 1 810280 467220 343060 514 84 554 1255;1256 1026;1027 1027 2 ELEQHIQTSDPENFQSEER SSASVDNRELEQHIQT ENFQSEERSDSDVNND R E L E R S 0 1 1 1 0 3 5 0 1 1 1 0 0 1 1 2 1 0 0 0 0 0 19 0 2315.0302 Q96K76 Q96K76 925 943 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 3 0.0040571 49.768 By MS/MS 1 1004800 0 1004800 515 1339 555 1257 1028 1028 1588 1 ELEVLLMCNK KFLVHNVKELEVLLMC EVLLMCNKSYCAEIAH K E L N K S 0 0 1 0 1 0 2 0 0 0 3 1 1 0 0 0 0 0 0 1 0 0 10 0 1247.6254 D3YTB1;F8W727;P62910 D3YTB1 84 93 RPL32 60S ribosomal protein L32 yes no 2 0.010653 66.351 By MS/MS 2 347870 347870 0 516 361 556;557 1258;1259 1029;1030 1029 58 2 ELFDDPSYVNVQNLDKAR PPPPCPGRELFDDPSY VQNLDKARQAVGGAGP R E L A R Q 1 1 2 3 0 1 1 0 0 0 2 1 0 1 1 1 0 0 1 2 0 0 18 1 2122.0331 P29353;H0Y539;X6R6D0;Q5T188 P29353 420 437 SHC1 SHC-transforming protein 1 yes no 3 0.0042941 53.255 By MS/MS By MS/MS 1 1 1363200 909660 453580 517 938 558 1260;1261 1031;1032 1031 1055 2 ELILGSETPSSPR LVLRPWIRELILGSET SETPSSPRAGQLLEDA R E L P R A 0 1 0 0 0 0 2 1 0 1 2 0 0 0 2 3 1 0 0 0 0 0 13 0 1384.7198 R4GNJ5;A0A0C4DGT6;Q96AP0 R4GNJ5 15 27 ACD Adrenocortical dysplasia protein homolog yes no 2 0.0032849 67.964 By matching By MS/MS 1 1 1779100 907390 871710 518 164 559 1262;1263 1033 1033 208 1 ELIPQESPR GKVGPDGKELIPQESP LIPQESPRVGGFGFVA K E L P R V 0 1 0 0 0 1 2 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 9 0 1067.5611 Q96DF8 Q96DF8 286 294 DGCR14 Protein DGCR14 yes yes 2 0.0073782 70.399 By MS/MS By matching 1 1 2209100 1130500 1078500 519 1325 560 1264;1265 1034 1034 1560 1 ELISNASDALDK SNKEIFLRELISNASD NASDALDKIRYESLTD R E L D K I 2 0 1 2 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1274.6354 P08238;F8W026;P14625;Q96GW1 P08238 42 53 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 2 0.0013433 86.882 By MS/MS By matching 1 1 4340700 2719200 1621500 520 871;900 561 1266;1267 1035 1035 1 ELLHSVHPESPNLK QTDGILTKELLHSVHP HPESPNLKTSLCFKEQ K E L L K T 0 0 1 0 0 0 2 0 2 0 3 1 0 0 2 2 0 0 0 1 0 0 14 0 1598.8417 Q9Y217 Q9Y217 552 565 MTMR6 Myotubularin-related protein 6 yes yes 3 8.6191E-05 86.498 By MS/MS By matching 1 1 4285800 2681000 1604800 521 1492 562 1268;1269 1036 1036 1822 1 ELQYIDAISNK NPQKYSDKELQYIDAI YIDAISNKQGELENYV K E L N K Q 1 0 1 1 0 1 1 0 0 2 1 1 0 0 0 1 0 0 1 0 0 0 11 0 1292.6612 I3L4C2;Q9UQB8;I3L4A3;I3L526;I3L125;I3L327;I3L1C8;I3L2M4 I3L4C2 194 204 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 2 0.013096 55.064 By MS/MS 1 0 0 0 522 696 563 1270 1037 1037 1 ELRPEDDMKPGSFDR KNGLTSKRELRPEDDM MKPGSFDRSIPENNIM R E L D R S 0 2 0 3 0 0 2 1 0 0 1 1 1 1 2 1 0 0 0 0 0 0 15 2 1790.8257 P22466 P22466 65 79 GAL Galanin peptides;Galanin;Galanin message-associated peptide yes yes 2 0.015857 47.288 By MS/MS 1 0 0 0 523 924 564 1271 1038 1038 162 1 ELSDQATASPIVAR DSLDSKGKELSDQATA TASPIVARTDLSNIPG K E L A R T 3 1 0 1 0 1 1 0 0 1 1 0 0 0 1 2 1 0 0 1 0 0 14 0 1456.7522 Q5JSH3 Q5JSH3 88 101 WDR44 WD repeat-containing protein 44 yes yes 2 9.2954E-89 176.43 By MS/MS By MS/MS 1 1 4170300 2025900 2144400 524 1156 565 1272;1273 1039;1040 1040 1347 2 ELSESVQQQSTPVPLISPK SKAEMDLKELSESVQQ PVPLISPKRQIRSRFQ K E L P K R 0 0 0 0 0 3 2 0 0 1 2 1 0 0 3 4 1 0 0 2 0 0 19 0 2066.0895 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 458 476 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.0085766 48.848 By MS/MS 1 1185300 0 1185300 525 38 566 1274 1041 1041 44 1 ELSLKASPLR VVLASVMKELSLKASP SLKASPLRSETAEGIV K E L L R S 1 1 0 0 0 0 1 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 1 1112.6554 Q86W50 Q86W50 323 332 METTL16 Methyltransferase-like protein 16 yes yes 2 0.010704 66.326 By matching By MS/MS 1 1 1765100 957370 807690 526 1233 567 1275;1276 1042 1042 1453 1 ELVSSKVSGAQEMVSSAK EKVLADTKELVSSKVS QEMVSSAKDTVATQL_ K E L A K D 2 0 0 0 0 1 2 1 0 0 1 2 1 0 0 5 0 0 0 3 0 0 18 1 1835.9299 K7ER39;K7EL96;K7ERZ3;O60664 K7ER39 144 161 PLIN3 Perilipin-3 yes no 2 0.0036942 68.463 By matching By MS/MS 1 1 855080 491820 363260 527 730 568 1277;1278 1043 1043 852 1 EMEHNTVCAAGTSPVGEIGEEK INNHLIAKEMEHNTVC VGEIGEEKILPTSETK K E M E K I 2 0 1 0 1 0 5 3 1 1 0 1 1 0 1 1 2 0 0 2 0 0 22 0 2344.0311 P18583;H7C1M2 P18583 1544 1565 SON Protein SON yes no 3 0.00086714 61.976 By MS/MS By MS/MS 2 2 18584000 11131000 7452900 528 909 569;570 1279;1280;1281;1282 1044;1045;1046 1046 158 1029;2113 3 EMLASDDEEDVSSK ISQKAEIKEMLASDDE DEEDVSSKVEKAYVPK K E M S K V 1 0 0 3 0 0 3 0 0 0 1 1 1 0 0 3 0 0 0 1 0 0 14 0 1553.6403 E7ETM8;E7EUA0;Q0ZGT2 E7ETM8 12 25 NEXN Nexilin yes no 2 0.015549 45.992 By MS/MS By matching 1 1 897590 390510 507080 529 421 571 1283;1284 1047 1047 72 0 EMLASDDEEDVSSKVEK ISQKAEIKEMLASDDE DVSSKVEKAYVPKLTG K E M E K A 1 0 0 3 0 0 4 0 0 0 1 2 1 0 0 3 0 0 0 2 0 0 17 1 1909.8463 E7ETM8;E7EUA0;Q0ZGT2 E7ETM8 12 28 NEXN Nexilin yes no 3 0.017245 48.391 By MS/MS 1 1276800 1276800 0 530 421 572 1285 1048 1048 72 1 EMVATQQEMMDAQLR GFPERKEREMVATQQE EMMDAQLRLQLRDYCA R E M L R L 2 1 0 1 0 3 2 0 0 0 1 0 3 0 0 0 1 0 0 1 0 0 15 0 1779.7954 P17568 P17568 38 52 NDUFB7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 yes yes 2 0.010116 57.434 By MS/MS 1 596120 596120 0 531 906 573 1286 1049 1049 157 2111 0 ENASPAPGTTAEEAMSR RASPEPQRENASPAPG TAEEAMSRGPPPAPEG R E N S R G 4 1 1 0 0 0 3 1 0 0 0 0 1 0 2 2 2 0 0 0 0 0 17 0 1717.7577 A0A024RCR6;A0A0G2JK23;P46379;H0Y710;A0A0G2JL47 A0A024RCR6 964 980 BAT3;BAG6 Large proline-rich protein BAG6 yes no 2 0.0019594 60.901 By matching By MS/MS 1 1 6653400 2149900 4503500 532 4 574 1287;1288 1050 1050 0 1 ENDYESISDLQQGR GHHGLVPKENDYESIS ISDLQQGRDITRL___ K E N G R D 0 1 1 2 0 2 2 1 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1652.7278 Q9NWQ8 Q9NWQ8 414 427 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 4.7779E-08 107.11 By MS/MS By MS/MS 1 1 10795000 6381100 4413700 533 1434 575 1289;1290 1051;1052 1051 2501 2 ENFSPWIQQHGGWEK GFGTKYLKENFSPWIQ QQHGGWEKILGISHEE K E N E K I 0 0 1 0 0 2 2 2 1 1 0 1 0 1 1 1 0 2 0 0 0 0 15 0 1841.8485 K7EMX4;Q9BZR8 K7EMX4 336 350 BCL2L14 Apoptosis facilitator Bcl-2-like protein 14 yes no 3 0.0082098 50.088 By MS/MS 1 485690 0 485690 534 733 576 1291 1053 1053 0 ENPPVEDSSDEDDKR YLGDDMKRENPPVEDS SSDEDDKRNQGNLYDK R E N K R N 0 1 1 4 0 0 3 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 15 1 1730.7231 Q8TCJ2 Q8TCJ2 491 505 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2;3 0.0031449 68.41 By MS/MS By MS/MS 2 1 2896700 2131300 765340 535 1279 577 1292;1293;1294 1054;1055;1056 1055 1510 3 ENSFGSPLEFR ELSNSPLRENSFGSPL FGSPLEFRNSGPLGTE R E N F R N 0 1 1 0 0 0 2 1 0 0 1 0 0 2 1 2 0 0 0 0 0 0 11 0 1281.599 Q9UQ35 Q9UQ35 1324 1334 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.019106 51.875 By matching By MS/MS 1 1 2559500 1257600 1301900 536 1487 578 1295;1296 1057 1057 1 ENSNNRVEQTGK E N G K 0 1 3 0 0 1 2 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 12 1 1374.6488 REV__Q5VSF9 yes no 3 0.0098909 41.695 By matching By MS/MS 1 1 1680300 725820 954520 + 537 1536 579 1297;1298 1058 1058 1881;2251 1 ENVEYIEREESDGEYDEFGRK YGGGFNERENVEYIER EYDEFGRKKKKYRGKA R E N R K K 0 2 1 2 0 0 7 2 0 1 0 1 0 1 0 1 0 0 2 1 0 0 21 2 2592.1252 O95218 O95218 110 130 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 4 0.0044218 44.089 By matching By MS/MS 1 1 3412400 1959400 1453000 538 812 580 1299;1300 1059 1059 957 1 ENVSDLTLGPGNSPITR HVDSSSGRENVSDLTL PGNSPITRMNPASGAL R E N T R M 0 1 2 1 0 0 1 2 0 1 2 0 0 0 2 2 2 0 0 1 0 0 17 0 1768.8955 Q6DCA0 Q6DCA0 62 78 AMMECR1L AMMECR1-like protein yes yes 2 9.6118E-06 85.563 By MS/MS By matching 1 1 4626300 2591000 2035300 539 1185 581 1301;1302 1060 1060 1393 1 ENYAELLEDAFLK RPGLSLVKENYAELLE LLEDAFLKNVTAQICI K E N L K N 2 0 1 1 0 0 3 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 13 0 1553.7613 A0A087X0S5;P12109 A0A087X0S5 789 801 COL6A1 Collagen alpha-1(VI) chain yes no 2 0.0012141 83.226 By MS/MS By MS/MS 1 1 3212400 2165000 1047500 540 74 582 1303;1304 1061;1062 1061 2 EPAITSQNSPEAR KDLDEKKKEPAITSQN SQNSPEAREERYFTV_ K E P A R E 2 1 1 0 0 1 2 0 0 1 0 0 0 0 2 2 1 0 0 0 0 0 13 0 1398.6739 E5RIS7;P23193 E5RIS7 92 104 TCEA1 Transcription elongation factor A protein 1 yes no 2 0.00010635 99.991 By MS/MS By MS/MS 1 1 4797400 2818700 1978700 541 392 583 1305;1306 1063;1064;1065 1064 444 3 EPFTNDRLQLPR ________________ NDRLQLPRNMIENSMF M E P P R N 0 2 1 1 0 1 1 0 0 0 2 0 0 1 2 0 1 0 0 0 0 0 12 1 1484.7736 Q9UIQ6 Q9UIQ6 2 13 LNPEP Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form yes yes 2 0.0097126 55.064 By MS/MS 1 0 0 0 542 1460 584 1307 1066 1066 2229 1 EPLSSETQYSVDTR HNIDHAQREPLSSETQ TQYSVDTRRPAPQKAL R E P T R R 0 1 0 1 0 1 2 0 0 0 1 0 0 0 1 3 2 0 1 1 0 0 14 0 1610.7424 A6PW57;Q99755;A2A3N6 A6PW57 326 339 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 2 0.013381 53.08 By MS/MS 1 1974400 0 1974400 543 239 585 1308 1067 1067 2289 1 EPSEVPTPK TALVGSQKEPSEVPTP PSEVPTPKRPRGRPKG K E P P K R 0 0 0 0 0 0 2 0 0 0 0 1 0 0 3 1 1 0 0 1 0 0 9 0 982.49713 P17096 P17096 47 55 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2 0.0017196 80.455 By MS/MS 1 994750 0 994750 544 905 586 1309 1068 1068 2110 0 EQDAPAAQGPPRK VSQEKRKREQDAPAAQ AAQGPPRKRASGPGDP R E Q R K R 3 1 0 1 0 2 1 1 0 0 0 1 0 0 3 0 0 0 0 0 0 0 13 1 1363.6844 Q92618 Q92618 467 479 ZNF516 Zinc finger protein 516 yes yes 2 0.018932 37.344 By MS/MS 1 389830 389830 0 545 1304 587 1310 1069 1069 0 EQDLPLAEAVRPKTPPVVIK KEEKSNGREQDLPLAE KTPPVVIKSQLKTQED R E Q I K S 2 1 0 1 0 1 2 0 0 1 2 2 0 0 4 0 1 0 0 3 0 0 20 2 2199.2627 Q96A49 Q96A49 235 254 SYAP1 Synapse-associated protein 1 yes yes 3 0.0053337 44.539 By matching By MS/MS 1 1 3673800 234500 3439300 546 1319 588 1311;1312 1070 1070 2200 1 EQISDIDDAVR PEQWSQLKEQISDIDD SDIDDAVRKL______ K E Q V R K 1 1 0 3 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1259.5994 P53999 P53999 115 125 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 2 0.0082321 68.893 By MS/MS 1 438880 0 438880 547 1007 589 1313 1071 1071 1 EQMMNSSISSGSGSLR EAKIHDLREQMMNSSI SSGSGSLRTSQKRSLY R E Q L R T 0 1 1 0 0 1 1 2 0 1 1 0 2 0 0 6 0 0 0 0 0 0 16 0 1669.74 E7EQD7;A0A0C4DFT3;Q12959 E7EQD7 562 577 DLG1 Disks large homolog 1 yes no 2 0.0035355 55.258 By MS/MS By MS/MS 1 1 1071700 333290 738360 548 142 590 1314;1315 1072;1073 1072 177;178;179 2 EQSEVSVSPR SPDRDKKKEQSEVSVS SEVSVSPRASKHHYSR K E Q P R A 0 1 0 0 0 1 2 0 0 0 0 0 0 0 1 3 0 0 0 2 0 0 10 0 1116.5411 E9PI52;Q7L4I2 E9PI52 25 34 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 2 1.2458E-05 132.56 By MS/MS By MS/MS 1 1 7746800 4539500 3207200 549 449 591 1316;1317 1074;1075;1076;1077 1076 526 4 EQSSDLTPSGDVSPVKPLSR KMKDNEEREQSSDLTP SPVKPLSRSAELEFPL R E Q S R S 0 1 0 2 0 1 1 1 0 0 2 1 0 0 3 5 1 0 0 2 0 0 20 1 2098.0542 Q8WYQ5 Q8WYQ5 365 384 DGCR8 Microprocessor complex subunit DGCR8 yes yes 3 0.017979 41.912 By MS/MS By matching 1 1 5109000 2856700 2252300 550 1298 592 1318;1319 1078 1078 1 EQVANSAFVER YYITGESKEQVANSAF ANSAFVERVRKRGFEV K E Q E R V 2 1 1 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1248.6099 P08238;Q58FF7 P08238 492 502 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.0016362 86.898 By MS/MS By MS/MS 1 1 1604000 1094900 509120 551 871 593 1320;1321 1079;1080 1079 2 EQWANLEQLSAIRK RERIIYIREQWANLEQ EQLSAIRKKRLEEASL R E Q R K K 2 1 1 0 0 2 2 0 0 1 2 1 0 0 0 1 0 1 0 0 0 0 14 1 1684.8897 A0A087WUZ3;Q01082 A0A087WUZ3 724 737 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.013431 49.216 By MS/MS 1 0 0 0 552 32 594 1322 1081 1081 1 EQYVPPRSPK GVTRRNGKEQYVPPRS YVPPRSPK________ K E Q P K - 0 1 0 0 0 1 1 0 0 0 0 1 0 0 3 1 0 0 1 1 0 0 10 1 1199.6299 X6RLN4;Q71RC2 X6RLN4 482 491 LARP4 La-related protein 4 yes no 2 0.00019666 116.03 By MS/MS By MS/MS 3 4 7340500 4698800 2641800 553 1212 595 1323;1324;1325;1326;1327;1328;1329 1082;1083;1084;1085;1086 1083 1417 4 ERDHSPTPSVFNSDEER ERTRERERERDHSPTP VFNSDEERYRYREYAE R E R E R Y 0 2 1 2 0 0 3 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 17 1 2000.8824 Q6UN15 Q6UN15 488 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 3 0.001916 57.142 By MS/MS By matching 2 2 11720000 7170900 4549000 554 1203 596;597 1330;1331;1332;1333 1087;1088 1088 1409;1410;2183 2 ERDTSPDKGELVSDEEEDT AIREDFLRERDTSPDK VSDEEEDT________ R E R D T - 0 1 0 4 0 0 5 1 0 0 1 1 0 0 1 2 2 0 0 1 0 0 19 2 2149.9135 Q9UPU7 Q9UPU7 945 963 TBC1D2B TBC1 domain family member 2B yes yes 3 0.0055361 57.788 By matching By MS/MS 1 1 5287900 3199500 2088500 555 1484 598 1334;1335 1089 1089 1797 1 ERDYAEIQDFHR EFRERQARERDYAEIQ AEIQDFHRTFGCDDEL R E R H R T 1 2 0 2 0 1 2 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 12 1 1577.7223 Q5VWV2;Q8TEW0 Q5VWV2 1017 1028 PARD3 Partitioning defective 3 homolog yes no 3 1.4897E-08 126.34 By MS/MS By MS/MS 1 1 2958200 1700900 1257300 556 1178 599 1336;1337 1090;1091 1090 2466 2 ERESSANNSVSPSESLR NHHELDHRERESSANN VSPSESLRASEKHRGS R E R L R A 1 2 2 0 0 0 3 0 0 0 1 0 0 0 1 6 0 0 0 1 0 0 17 1 1847.8609 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726 H0YKH0 193 209 TLE3 Transducin-like enhancer protein 3 yes no 3 0.0011157 75.912 By MS/MS By matching 1 1 4599400 2876800 1722500 557 505 600 1338;1339 1092;1093 1093 595;596;597 2 ERGTPPVDPK RHAPAMLRERGTPPVD GTPPVDPKLAWVGDVF R E R P K L 0 1 0 1 0 0 1 1 0 0 0 1 0 0 3 0 1 0 0 1 0 0 10 1 1094.572 P48634 P48634 779 788 PRRC2A Protein PRRC2A yes yes 2 0.010454 75.566 By MS/MS By matching 1 1 3158900 1680600 1478300 558 973 601 1340;1341 1094 1094 2128 1 ERHPSWRSEETQER PKLERRPRERHPSWRS RSEETQERERSRTGSE R E R E R E 0 3 0 0 0 1 4 0 1 0 0 0 0 0 1 2 1 1 0 0 0 0 14 2 1825.8456 E7EX17;P23588 E7EX17 402 415 EIF4B Eukaryotic translation initiation factor 4B yes no 4 0.0035086 50.088 By MS/MS By matching 1 1 3624400 1105800 2518600 559 431 602 1342;1343 1095 1095 508 1 ERLDGENIYIR TEAWKKKRERLDGENI DGENIYIRHSNLMLED R E R I R H 0 2 1 1 0 0 2 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 11 1 1376.7048 Q4VB86;P11171 Q4VB86 410 420 EPB41 Protein 4.1 yes no 3 7.119E-06 121.29 By MS/MS By MS/MS 1 1 8676000 4977900 3698000 560 887 603 1344;1345 1096;1097 1097 2398 2 ERPSSAIYPSDSFR LRSKTTIRERPSSAIY IYPSDSFRQSLLGSRR R E R F R Q 1 2 0 1 0 0 1 0 0 1 0 0 0 1 2 4 0 0 1 0 0 0 14 1 1610.7689 V9GYF5;V9GYG5;V9GZ14;V9GYM8;Q92974 V9GYF5 110 123 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.0038674 68.481 By MS/MS By MS/MS 1 1 6609500 3273900 3335600 561 1318 604 1346;1347 1098;1099 1098 1552;1553 2 ERSDSGGSSSEPFDR HPSGLVPRERSDSGGS SSSEPFDRHAPAMLRE R E R D R H 0 2 0 2 0 0 2 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 15 1 1611.6761 P48634 P48634 757 771 PRRC2A Protein PRRC2A yes yes 3 0.0092346 48.51 By MS/MS By MS/MS 1 1 1976600 1154800 821870 562 973 605 1348;1349 1100;1101 1101 1108;1109 1 ERSPALKSPLQSVVVR AVSELSPRERSPALKS PLQSVVVRRRSPRPSP R E R V R R 1 2 0 0 0 1 1 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 16 2 1765.021 Q9Y2W1 Q9Y2W1 246 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0004022 82.189 By MS/MS By MS/MS 1 1 31669000 18093000 13576000 563 1501 606 1350;1351 1102;1103 1103 1836;1837;1838 2 ERSPSPPTIQSK RKRRRMLRERSPSPPT SPPTIQSKRQTPSPRL R E R S K R 0 1 0 0 0 1 1 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 12 1 1325.6939 H7C3B5;H0Y613;Q14687 H7C3B5 26 37 GSE1 Genetic suppressor element 1 yes no 2 0.004902 73.219 By MS/MS 1 0 0 0 564 594 607 1352 1104 1104 713;714 1 ESAEPPLTQSDK TLHLCSAKESAEPPLT PPLTQSDKRETSHTTA K E S D K R 1 0 0 1 0 1 2 0 0 0 1 1 0 0 2 2 1 0 0 0 0 0 12 0 1300.6147 Q86TB3 Q86TB3 569 580 ALPK2 Alpha-protein kinase 2 yes yes 2 0.0020798 73.985 By MS/MS By matching 1 1 3742700 1809000 1933600 565 1227 608 1353;1354 1105 1105 1441 1 ESCSSPSTVGSSLTTR TPQQQKCRESCSSPST VGSSLTTRKIDPPAVP R E S T R K 0 1 0 0 1 0 1 1 0 0 1 0 0 0 1 6 3 0 0 1 0 0 16 0 1654.7468 E9PMC9;Q7Z589;H0YEP9 E9PMC9 1111 1126 C11orf30;EMSY Protein EMSY yes no 2 0.01212 46.985 By MS/MS By matching 1 1 1270200 615400 654830 566 466 609 1355;1356 1106 1106 548 1 ESDQTLAALLSPK TEEPLPVKESDQTLAA LAALLSPKESSGGEKE K E S P K E 2 0 0 1 0 1 1 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 13 0 1371.7246 P18583;H7C1M2 P18583 1687 1699 SON Protein SON yes no 2 1.5863E-06 103.39 By MS/MS By MS/MS 1 1 1464800 710290 754530 567 909 610 1357;1358 1107;1108 1108 1030 2 ESDTKNEVNGTSEDIKSEGDTQSN EDTNTESKESDTKNEV SEGDTQSN________ K E S S N - 0 0 3 3 0 1 4 2 0 1 0 2 0 0 0 4 3 0 0 1 0 0 24 2 2583.1056 O95232 O95232 409 432 LUC7L3 Luc7-like protein 3 yes yes 3 0.0044891 51.386 By MS/MS By matching 1 1 6938800 4268500 2670300 568 813 611 1359;1360 1109 1109 960 1 ESESAPGDFSLSVK HDGAFLIRESESAPGD GDFSLSVKFGNDVQHF R E S V K F 1 0 0 1 0 0 2 1 0 0 1 1 0 1 1 4 0 0 0 1 0 0 14 0 1451.678 P62993;J3KT38 P62993 87 100 GRB2 Growth factor receptor-bound protein 2 yes no 2 0.0073235 58.511 By MS/MS By matching 1 1 8346800 7317000 1029800 569 1028 612 1361;1362 1110 1110 1 ESFGGSSEIVDQLEVEIR EKLVIQLKESFGGSSE DQLEVEIRNMTLLVEK K E S I R N 0 1 0 1 0 1 4 2 0 2 1 0 0 1 0 3 0 0 0 2 0 0 18 0 1992.964 Q6UX06 Q6UX06 175 192 OLFM4 Olfactomedin-4 yes yes 2;3 1.2772E-11 123.28 By MS/MS By MS/MS 3 3 29091000 18198000 10893000 570 1206 613 1363;1364;1365;1366;1367;1368 1111;1112;1113;1114 1112 4 ESLCDSPHQNLSRPLLENK NYRNESARESLCDSPH SRPLLENKLKAFSIGK R E S N K L 0 1 2 1 1 1 2 0 1 0 4 1 0 0 2 3 0 0 0 0 0 0 19 1 2236.0906 U3KPT1;C9JDJ7;C9J5L1;E7EW00;H0Y8D9;E7ET15;O15042 U3KPT1 42 60 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 3 0.009814 46.121 By MS/MS By MS/MS 1 1 5184600 2742900 2441700 571 321 614 1369;1370 1115;1116 1116 385 2 ESLKEEDESDDDNM EEAEKYAKESLKEEDE DESDDDNM________ K E S N M - 0 0 1 4 0 0 4 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 14 1 1654.6152 H0YJ03;G3V4X5;P25788 H0YJ03 70 83 PSMA3 Proteasome subunit alpha type-3 yes no 2 0 233.28 By MS/MS By MS/MS 1 1 119820000 58541000 61275000 572 561 615 1371;1372 1117;1118 1117 660;661 2 ESNIQTMGGKTFK TNKFTVGKESNIQTMG TMGGKTFKATVQMEGG K E S F K A 0 0 1 0 0 1 1 2 0 1 0 2 1 1 0 1 2 0 0 0 0 0 13 1 1439.7079 P51161 P51161 69 81 FABP6 Gastrotropin yes yes 2 0.0093496 41.283 By MS/MS 1 243670 243670 0 573 992 616 1373 1119 1119 2135;2136 1 ESPGPIGLSTEK E S E K 0 0 0 0 0 0 2 2 0 1 1 1 0 0 2 2 1 0 0 0 0 0 12 0 1213.619 REV__E5RHI8 yes yes 2 0.0048218 67.879 By MS/MS By MS/MS 2 2 16846000 7979000 8867200 + 574 1528 617 1374;1375;1376;1377 1120;1121 1121 1872 2 ESSANNSVSPSESLR HELDHRERESSANNSV VSPSESLRASEKHRGS R E S L R A 1 1 2 0 0 0 2 0 0 0 1 0 0 0 1 6 0 0 0 1 0 0 15 0 1562.7172 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726 H0YKH0 195 209 TLE3 Transducin-like enhancer protein 3 yes no 2 5.5924E-05 85.28 By MS/MS By MS/MS 1 1 13313000 7438100 5875000 575 505 618 1378;1379 1122;1123 1122 595;596;597 2 ESSIIAPAPAEDVDTPPR QVYEFRVKESSIIAPA EDVDTPPRKKKRKHRL K E S P R K 3 1 0 2 0 0 2 0 0 2 0 0 0 0 4 2 1 0 0 1 0 0 18 0 1863.9214 Q15910 Q15910 473 490 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 2;3 0.001072 79.514 By MS/MS By matching 2 2 8046600 4489200 3557400 576 1134 619 1380;1381;1382;1383 1124;1125 1125 2165 2 ESSPIPSPTSDRK TEQRTSSKESSPIPSP PSPTSDRKAKTALPAQ K E S R K A 0 1 0 1 0 0 1 0 0 1 0 1 0 0 3 4 1 0 0 0 0 0 13 1 1399.6943 A0A087WUZ3;Q01082 A0A087WUZ3 2165 2177 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.0092512 56.872 By MS/MS 1 0 0 0 577 32 620 1384 1126 1126 37;38;1896 1 ESTSSKSPPR EMFETAIKESTSSKSP TSSKSPPRKINSSPNV K E S P R K 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 4 1 0 0 0 0 0 10 1 1074.5306 P78347 P78347 817 826 GTF2I General transcription factor II-I yes yes 2 1.9969E-05 104.17 By MS/MS By MS/MS 1 1 19031000 10519000 8511500 578 1032 621 1385;1386 1127;1128 1128 1173 2 ESVNSPVFGK EKEKRTSKESVNSPVF VNSPVFGKASLLTGGL K E S G K A 0 0 1 0 0 0 1 1 0 0 0 1 0 1 1 2 0 0 0 2 0 0 10 0 1062.5346 E7ESJ3;Q9UPS8 E7ESJ3 643 652 ANKRD26 Ankyrin repeat domain-containing protein 26 yes no 2 0.0021792 77.124 By matching By MS/MS 1 1 807930 391190 416730 579 417 622 1387;1388 1129 1129 475 1 ESVPEFPLSPPK LILSPRSKESVPEFPL EFPLSPPKKKDLSLEE K E S P K K 0 0 0 0 0 0 2 0 0 0 1 1 0 1 4 2 0 0 0 1 0 0 12 0 1325.6867 A2A2D0;P16949 A2A2D0 30 41 STMN1 Stathmin yes no 2 2.0506E-36 157.09 By MS/MS By MS/MS 1 1 20854000 16380000 4473900 580 223 623 1389;1390 1130;1131;1132;1133;1134;1135 1131 277 6 ESVPEFPLSPPKKK LILSPRSKESVPEFPL PLSPPKKKDLSLEEIQ K E S K K D 0 0 0 0 0 0 2 0 0 0 1 3 0 1 4 2 0 0 0 1 0 0 14 2 1581.8766 A2A2D0;P16949 A2A2D0 30 43 STMN1 Stathmin yes no 3 0.0013968 82.349 By matching By MS/MS 1 1 3547100 2137500 1409600 581 223 624 1391;1392 1136 1136 277 1 ESWVSPR DLKQQSTRESWVSPRK RESWVSPRKRGLSSSE R E S P R K 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 2 0 1 0 1 0 0 7 0 859.41882 Q8IYH5 Q8IYH5 78 84 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.019778 79.148 By MS/MS By matching 1 1 1006700 515100 491610 582 1247 625 1393;1394 1137 1137 1 ESYEVSLTQK EELRNKNRESYEVSLT YEVSLTQKTDPSVRPM R E S Q K T 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 1 0 1 1 0 0 10 0 1182.5768 D6RDK6;D6RBN5;Q9NX40 D6RDK6 154 163 OCIAD1 OCIA domain-containing protein 1 yes no 2 0.019258 56.434 By MS/MS By matching 1 1 811870 345720 466150 583 373 626 1395;1396 1138 1138 2326 0 ESYSVYVYK KKRKRSRKESYSVYVY SYSVYVYKVLKQVHPD K E S Y K V 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 3 2 0 0 9 0 1136.539 U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814 U3KQK0 36 44 HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K yes no 2 0.0087399 73.665 By MS/MS By MS/MS 1 1 3663100 2524300 1138800 584 793 627 1397;1398 1139;1140 1140 2 ETERASPIK AKDVTLLKETERASPI TERASPIKMDLAPSKD K E T I K M 1 1 0 0 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 0 0 0 9 1 1029.5455 E7EVA0;P27816 E7EVA0 370 378 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 8.7851E-05 99.343 By MS/MS By MS/MS 1 1 2165300 2165300 0 585 427 628 1399;1400 1141;1142 1142 497;1986 2 ETERASPIKMDLAPSK AKDVTLLKETERASPI KMDLAPSKDMGPPKEN K E T S K D 2 1 0 1 0 0 2 0 0 1 1 2 1 0 2 2 1 0 0 0 0 0 16 2 1771.9138 E7EVA0;P27816 E7EVA0 370 385 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 5.5442E-06 94.487 By MS/MS By MS/MS 2 2 21375000 12669000 8705300 586 427 629;630 1401;1402;1403;1404 1143;1144;1145;1146 1144 73 497;1986 4 ETPHSPGVEDAPIAK PAQLANARETPHSPGV VEDAPIAKVGVLAASM R E T A K V 2 0 0 1 0 0 2 1 1 1 0 1 0 0 3 1 1 0 0 1 0 0 15 0 1546.7627 F8VS07;F8VQE1;Q9UHB6 F8VS07 183 197 LIMA1 LIM domain and actin-binding protein 1 yes no 2;3 1.4889E-13 111.88 By MS/MS By MS/MS 1 2 52985000 17212000 35773000 587 511 631 1405;1406;1407 1147;1148;1149 1149 603 3 ETPPNGNLSPAPR KGKLGGPKETPPNGNL GNLSPAPRLRRDYSYE K E T P R L 1 1 2 0 0 0 1 1 0 0 1 0 0 0 4 1 1 0 0 0 0 0 13 0 1348.6735 P48634 P48634 996 1008 PRRC2A Protein PRRC2A yes yes 2 0.0032111 68.277 By MS/MS By MS/MS 1 1 4699700 2252200 2447500 588 973 632 1408;1409 1150;1151;1152 1150 1110 3 ETQSPEQVK SERITVKKETQSPEQV TQSPEQVKSEKLKDLF K E T V K S 0 0 0 0 0 2 2 0 0 0 0 1 0 0 1 1 1 0 0 1 0 0 9 0 1044.5088 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 491 499 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.01751 56.632 By matching By MS/MS 1 1 2990700 1405900 1584800 589 457 633 1410;1411 1153 1153 536;1998 1 ETQSPEQVKSEK SERITVKKETQSPEQV PEQVKSEKLKDLFDYS K E T E K L 0 0 0 0 0 2 3 0 0 0 0 2 0 0 1 2 1 0 0 1 0 0 12 1 1388.6783 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 491 502 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 1.514E-47 161.87 By MS/MS By MS/MS 1 1 9600900 6737000 2863900 590 457 634 1412;1413 1154;1155;1156;1157 1155 536;1998 4 ETSFGSSENITMTSLSK ATSILQKKETSFGSSE ITMTSLSKVTTFVSED K E T S K V 0 0 1 0 0 0 2 1 0 1 1 1 1 1 0 5 3 0 0 0 0 0 17 0 1817.8353 Q9UMZ2;A0A087WZS7 Q9UMZ2 930 946 SYNRG Synergin gamma yes no 2 0.010045 46.319 By matching By MS/MS 1 1 2962200 1450800 1511500 591 1478 635 1414;1415 1158 1158 253 1788;2231 1 ETSVSKEDTDHEEK SDVEVEEKETSVSKED EDTDHEEKASNEDVTK K E T E K A 0 0 0 2 0 0 4 0 1 0 0 2 0 0 0 2 2 0 0 1 0 0 14 1 1632.7115 O75475 O75475 114 127 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 0.0002487 93.738 By MS/MS By MS/MS 2 1 4076100 1007200 3068800 592 798 636 1416;1417;1418 1159;1160 1160 2081 2 EVDEDSEPEREVR FVRVKREREVDEDSEP SEPEREVRAKNGRVDS R E V V R A 0 2 0 2 0 0 5 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 1 1587.7013 F8WC91;B9A018;Q53GS9 F8WC91 77 89 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 2 9.7782E-07 106.29 By matching By MS/MS 1 1 11713000 7541900 4171300 593 303 637 1419;1420 1161 1161 358 1 EVDEQMLNVQNK FRGRMSMKEVDEQMLN QMLNVQNKNSSYFVEW K E V N K N 0 0 2 1 0 2 2 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 12 0 1445.682 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 Q5JP53 307 318 TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain yes no 2 8.4952E-14 141.2 By MS/MS By MS/MS 2 2 7387400 4284700 3102700 594 864 638;639 1421;1422;1423;1424 1162;1163;1164;1165 1164 138 4 EVDYSGLR EWKELEQKEVDYSGLR EVDYSGLRVQAMQISS K E V L R V 0 1 0 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 8 0 937.45051 Q9UKY7;H0Y8K3 Q9UKY7 92 99 CDV3 Protein CDV3 homolog yes no 2 0.017165 77.923 By MS/MS By MS/MS 1 1 2160500 1061300 1099100 595 1469 640 1425;1426 1166;1167 1167 2509 2 EVEDKESEGEEEDEDEDLSK VGPASILKEVEDKESE DEDEDLSKYKLDEDED K E V S K Y 0 0 0 4 0 0 9 1 0 0 1 2 0 0 0 2 0 0 0 1 0 0 20 1 2338.9296 O95218 O95218 147 166 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 4.6294E-09 89.507 By MS/MS 1 22090000 0 22090000 596 812 641 1427 1168 1168 958 1 EVEDKESEGEEEDEDEDLSKYK VGPASILKEVEDKESE DEDLSKYKLDEDEDED K E V Y K L 0 0 0 4 0 0 9 1 0 0 1 3 0 0 0 2 0 0 1 1 0 0 22 2 2630.0879 O95218 O95218 147 168 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 3.5559E-10 88.471 By matching By MS/MS 1 1 13654000 7943000 5711100 597 812 642 1428;1429 1169 1169 958 1 EVEPEPTEDKDLEADEEDTR ETQPSETKEVEPEPTE EADEEDTRKKDASDDL K E V T R K 1 1 0 4 0 0 7 0 0 0 1 1 0 0 2 0 2 0 0 1 0 0 20 1 2345.003 P20042 P20042 43 62 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 0.00088323 61.815 By MS/MS By matching 1 1 2117700 940080 1177600 598 918 643 1430;1431 1170 1170 1 EVFEDAAEIR KVTQDELKEVFEDAAE FEDAAEIRLVSKDGKS K E V I R L 2 1 0 1 0 0 3 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 10 0 1177.5615 P19338;H7BY16 P19338 411 420 NCL Nucleolin yes no 2 0.0041441 75.378 By matching By MS/MS 1 1 1557900 1066800 491100 599 914 644 1432;1433 1171 1171 1 EVGTPHGIILDSVDAAFICPGSSR GYPKRLEKEVGTPHGI FICPGSSRLHIMAGRR K E V S R L 2 1 0 2 1 0 1 3 1 3 1 0 0 1 2 3 1 0 0 2 0 0 24 0 2497.2271 P02790 P02790 348 371 HPX Hemopexin yes yes 3 0.0037798 44.541 By MS/MS By matching 1 1 2283500 1766200 517390 600 846 645 1434;1435 1172 1172 1 EVIKSPTASR KEGDFVYKEVIKSPTA IKSPTASRISLGKKVK K E V S R I 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 2 1 0 0 1 0 0 10 1 1086.6033 O94885 O94885 438 447 SASH1 SAM and SH3 domain-containing protein 1 yes yes 2 0.0029405 72.705 By MS/MS By matching 1 1 1000200 528190 471960 601 809 646 1436;1437 1173 1173 954 0 EVPSKEEPSPVKAEVAEK TKPSVTEKEVPSKEEP VKAEVAEKQATDVKPK K E V E K Q 2 0 0 0 0 0 5 0 0 0 0 3 0 0 3 2 0 0 0 3 0 0 18 2 1952.0102 P46821;D6RA40;D6RA32 P46821 606 623 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 3 0.0059248 56.407 By MS/MS 1 4558600 4558600 0 602 968 647 1438 1174 1174 1097 1 EVQAEQPSSSSPR KEKEKADREVQAEQPS QPSSSSPRRKTVKEKD R E V P R R 1 1 0 0 0 2 2 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 13 0 1400.6532 Q9Y388 Q9Y388 178 190 RBMX2 RNA-binding motif protein, X-linked 2 yes yes 2 7.5227E-38 159.12 By MS/MS By MS/MS 1 1 3976400 2126500 1849900 603 1505 648 1439;1440 1175;1176;1177;1178;1179 1179 1848;1849;1850 5 EVSFQSTGESEWK ESDIFSIREVSFQSTG STGESEWKDTNYTLNT R E V W K D 0 0 0 0 0 1 3 1 0 0 0 1 0 1 0 3 1 1 0 1 0 0 13 0 1512.6733 I3L3Q7;I3L3B0;Q07021 I3L3Q7 104 116 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 2 0.010995 52.5 By matching By MS/MS 1 1 932000 421970 510030 604 694 649 1441;1442 1180 1180 820 1 EVTSDSGSIVVSGLTPGVEYVYTIQVLR SQGGEAPREVTSDSGS VYTIQVLRDGQERDAP R E V L R D 0 1 0 1 0 1 2 3 0 2 2 0 0 0 1 4 3 0 2 6 0 0 28 0 2967.5441 P02751 P02751 1130 1157 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 3 0.0061642 41.06 By matching By MS/MS 1 2 17661000 2721800 14939000 605 843 650 1443;1444;1445 1181;1182 1181 2 EVVEEAENGR TKDLKEKKEVVEEAEN VEEAENGRDAPANGNA K E V G R D 1 1 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 10 0 1130.5204 B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1;P06454 B8ZZQ6 22 31 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 2 0.006639 59.35 By MS/MS 1 0 0 0 606 298 651 1446 1183 1183 1 EVYELLDSPGK KLYEGKTKEVYELLDS ELLDSPGKVLLQSKDQ K E V G K V 0 0 0 1 0 0 2 1 0 0 2 1 0 0 1 1 0 0 1 1 0 0 11 0 1248.6238 E9PBS1;P22234 E9PBS1 20 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 2.2197E-05 128.6 By MS/MS By MS/MS 2 2 5830900 2979200 2851700 607 433 652 1447;1448;1449;1450 1184;1185 1184 511;2332 2 EWFWDLATGTMK VLFFQGDREWFWDLAT DLATGTMKERSWPAVG R E W M K E 1 0 0 1 0 0 1 1 0 0 1 1 1 1 0 0 2 2 0 0 0 0 12 0 1483.6806 P02790;Q9BS19 P02790 167 178 HPX Hemopexin yes no 2 0.00070162 90.827 By MS/MS 1 1683000 0 1683000 608 846 653 1451 1186 1186 133 1 EWNGVVSESDSPVK PPPKAALKEWNGVVSE SESDSPVKRPGRKAAR K E W V K R 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 3 0 1 0 3 0 0 14 0 1531.7155 M0R0Q7;P18858;M0QY71;M0R1G7;B4E135;F5GZ28 M0R0Q7 41 54 LIG1 DNA ligase;DNA ligase 1 yes no 2 1.3193E-14 130.47 By MS/MS By MS/MS 1 1 3488900 1897800 1591100 609 748 654 1452;1453 1187;1188 1187 865 2 EYDQLYEEYTR QQYQDKSREYDQLYEE QLYEEYTRTSQGLLGS R E Y T R T 0 1 0 1 0 1 3 0 0 0 1 0 0 0 0 0 1 0 3 0 0 0 11 0 1507.6467 E9PFP1;O00459 E9PFP1 459 469 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta yes no 2 0.0087183 67.704 By MS/MS By MS/MS 1 1 1949100 1201700 747430 610 443 655 1454;1455 1189;1190 1189 2334 2 EYFTFPASK IPTQTYTREYFTFPAS YFTFPASKSQDRMAPP R E Y S K S 1 0 0 0 0 0 1 0 0 0 0 1 0 2 1 1 1 0 1 0 0 0 9 0 1088.5179 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1188 1196 MLLT4 Afadin yes no 2 0.0081265 73.985 By MS/MS By MS/MS 1 1 5647100 3215800 2431300 611 242 656 1456;1457 1191;1192 1192 2290 2 EYIPGQPPLSQSSDSSPTR QYKEKTGKEYIPGQPP SSDSSPTRNSEPAGLE K E Y T R N 0 1 0 1 0 2 1 1 0 1 1 0 0 0 4 5 1 0 1 0 0 0 19 0 2044.9702 V9GYZ6;P07814 V9GYZ6 878 896 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2;3 9.9178E-46 144.17 By MS/MS By MS/MS 2 2 87819000 47784000 40036000 612 867 657 1458;1459;1460;1461 1193;1194;1195;1196;1197;1198;1199;1200 1195 993;994;995;996;2100 8 EYSPPYAPSHQQYPPSHATPLPK EKGHRKYREYSPPYAP SHATPLPKKAYSKMDS R E Y P K K 2 0 0 0 0 2 1 0 2 0 1 1 0 0 7 3 1 0 3 0 0 0 23 0 2591.2445 Q9UPT8 Q9UPT8 157 179 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 3 0.0059329 44.238 By matching By MS/MS 1 1 1246500 635210 611240 613 1482 658 1462;1463 1201 1201 1793 1 EYVQLISVYEK EKELSKVREYVQLISV QLISVYEKKLLNLTVR R E Y E K K 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 1 0 0 2 2 0 0 11 0 1369.7129 Q6UX06 Q6UX06 122 132 OLFM4 Olfactomedin-4 yes yes 2 1.8659E-05 115.23 By MS/MS By MS/MS 1 1 27765000 17460000 10305000 614 1206 659 1464;1465 1202;1203 1202 2 FAELVYTGFWHSPECEFVR IKQGLGLKFAELVYTG SPECEFVRHCIAKSQE K F A V R H 1 1 0 0 1 0 3 1 1 0 1 0 0 3 1 1 1 1 1 2 0 0 19 0 2373.0888 P00966 P00966 317 335 ASS1 Argininosuccinate synthase yes yes 3 0.0010655 59.434 By MS/MS By MS/MS 1 1 2149900 1443100 706750 615 834 660 1466;1467 1204;1205 1204 2 FAHTNVESLVNEYDDNGEGIILFR SNLRDNYRFAHTNVES GEGIILFRPSHLTNKF R F A F R P 1 1 3 2 0 0 3 2 1 2 2 0 0 2 0 1 1 0 1 2 0 0 24 0 2751.314 P30101 P30101 184 207 PDIA3 Protein disulfide-isomerase A3 yes yes 3 5.4632E-38 108.99 By MS/MS By MS/MS 1 1 15918000 10823000 5095000 616 942 661 1468;1469 1206;1207;1208;1209 1207 4 FAIQDISVEETSAK MIWTIILRFAIQDISV SVEETSAKEGLLLWCQ R F A A K E 2 0 0 1 0 1 2 0 0 2 0 1 0 1 0 2 1 0 0 1 0 0 14 0 1536.7672 P12814;H9KV75;P35609;O43707;G3V5M4;G3V2N5;A0A087WSZ2;Q08043;G3V2E8;G3V2X9;G3V2W4 P12814 134 147 ACTN1;ACTN2;ACTN4;ACTN3 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4;Alpha-actinin-3 yes no 2 0.00052774 91.937 By matching By MS/MS 1 1 1157100 702160 454910 617 895 662 1470;1471 1210 1210 1 FANYIDK ELQELNDRFANYIDKV RFANYIDKVRFLEQQN R F A D K V 1 0 1 1 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 0 7 0 869.42832 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0 P08670 114 120 VIM Vimentin yes no 2 0.0089042 107.59 By MS/MS By matching 1 1 1349800 855900 493890 618 874 663 1472;1473 1211 1211 1 FASDDEHDEHDENGATGPVK QFQGKKTKFASDDEHD NGATGPVKRAREETDK K F A V K R 2 0 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 20 0 2168.8883 P05455 P05455 364 383 SSB Lupus La protein yes yes 3 0.0012478 60.334 By MS/MS By matching 2 2 38033000 19369000 18663000 619 856 664 1474;1475;1476;1477 1212;1213 1212 10 985 2 FASDDEHDEHDENGATGPVKR QFQGKKTKFASDDEHD GATGPVKRAREETDKE K F A K R A 2 1 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 21 1 2324.9894 P05455 P05455 364 384 SSB Lupus La protein yes yes 3;4 1.405E-67 149.86 By MS/MS By MS/MS 6 6 668950000 394070000 274890000 620 856 665;666 1478;1479;1480;1481;1482;1483;1484;1485;1486;1487;1488;1489 1214;1215;1216;1217;1218;1219;1220;1221 1215 10 985 8 FAVPTYAAK ________________ AVPTYAAKQPQQFPSR R F A A K Q 3 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 1 1 0 0 9 0 966.51747 A0A0J9YY58;Q13443 A0A0J9YY58 7 15 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes no 2 0.0066491 111.01 By matching By MS/MS 1 1 3625700 1756900 1868900 621 190 667 1490;1491 1222 1222 1935 1 FECKDCGETFNK KSQVGGKRFECKDCGE DCGETFNKSAALAEHR R F E N K S 0 0 1 1 2 0 2 1 0 0 0 2 0 2 0 0 1 0 0 0 0 0 12 1 1533.6228 Q9GZU2;M0QZD4 Q9GZU2 505 516 PEG3 Paternally-expressed gene 3 protein yes no 2 0.019106 40.352 By MS/MS 1 1625000 1625000 0 622 1388 668 1492 1223 1223 0 FEDENFILK GKSIYGEKFEDENFIL EDENFILKHTGPGILS K F E L K H 0 0 1 1 0 0 2 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1153.5655 P62937;F8WE65;C9J5S7 P62937 83 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 2 0.00031285 99.442 By MS/MS 1 0 0 0 623 1027 669 1493 1224 1224 1 FEEESKEPVADEEEEDSDDDVEPITEFR LYVMVNAKFEEESKEP VEPITEFRFVPSDKSA K F E F R F 1 1 0 5 0 0 10 0 0 1 0 1 0 2 2 2 1 0 0 2 0 0 28 1 3313.3794 P54105;E9PJF4 P54105 86 113 CLNS1A Methylosome subunit pICln yes no 3 2.7869E-87 142.45 By MS/MS By matching 1 1 408700000 243260000 165440000 624 1008 670 1494;1495 1225 1225 1156 1 FEELNADLFR YTSITRARFEELNADL ELNADLFRGTLDPVEK R F E F R G 1 1 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 10 0 1252.6088 E9PKE3;P11142;E9PN89;E9PNE6;A8K7Q2;P54652 E9PKE3 283 292 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 0.0058906 71.379 By MS/MS By MS/MS 1 1 584200 432590 151600 625 458 671 1496;1497 1226;1227 1226 2 FEPESPGFESR EFEPQSPRFEPESPGF ESPGFESRSPGLVPPS R F E S R S 0 1 0 0 0 0 3 1 0 0 0 0 0 2 2 2 0 0 0 0 0 0 11 0 1280.5673 H3BS42;Q9H5H4 H3BS42 48 58 ZNF768 Zinc finger protein 768 yes no 2 0.00056505 91.202 By MS/MS By MS/MS 1 1 6976500 3244000 3732500 626 659 672 1498;1499 1228;1229;1230 1229 774 3 FESPATGILSPR MYGPPALRFESPATGI ATGILSPRGDDYFNYN R F E P R G 1 1 0 0 0 0 1 1 0 1 1 0 0 1 2 2 1 0 0 0 0 0 12 0 1273.6667 P49792 P49792 946 957 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.0018849 77.776 By MS/MS By matching 1 1 1201700 777710 423950 627 981 673 1500;1501 1231 1231 1126 1 FFTTPSK TPKKPEAKFFTTPSKS KFFTTPSKSVRKASHT K F F S K S 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 1 2 0 0 0 0 0 7 0 826.4225 O76021 O76021 462 468 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 2 0.0040643 138.06 By matching By MS/MS 1 1 2032100 1060900 971140 628 804 674 1502;1503 1232 1232 2088 1 FGESEEVEMEVESDEEDDKQEK LIQERYEKFGESEEVE EEDDKQEKAEEPPSQL K F G E K A 0 0 0 3 0 1 9 1 0 0 0 2 1 1 0 2 0 0 0 2 0 0 22 1 2616.0545 H7C1L2;Q15459 H7C1L2 13 34 SF3A1 Splicing factor 3A subunit 1 yes no 4 0.0022582 45.844 By MS/MS 1 436740 0 436740 629 676 675 1504 1233 1233 108 799 1 FGEVVDCTLK DLKDYFSKFGEVVDCT EVVDCTLKLDPITGRS K F G L K L 0 0 0 1 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1166.5642 D6RAF8;Q14103;D6RD83;D6RF44;H0YA96;H0Y8G5;D6RBQ9 D6RAF8 120 129 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.0043293 74.165 By MS/MS By matching 1 1 829820 411780 418040 630 367 676 1505;1506 1234 1234 1 FGEYNSNMSPEEK SNVFRDKRFGEYNSNM SNMSPEEKMMKRFALE R F G E K M 0 0 2 0 0 0 3 1 0 0 0 1 1 1 1 2 0 0 1 0 0 0 13 0 1530.6297 E9PFK5;P78316 E9PFK5 88 100 NOP14 Nucleolar protein 14 yes no 2 0.0032659 68.044 By MS/MS By MS/MS 2 2 11026000 5317400 5708600 631 442 677;678 1507;1508;1509;1510 1235;1236;1237 1237 77 519 3 FGNDVQHFK GDFSLSVKFGNDVQHF GNDVQHFKVLRDGAGK K F G F K V 0 0 1 1 0 1 0 1 1 0 0 1 0 2 0 0 0 0 0 1 0 0 9 0 1090.5196 P62993;J3KT38 P62993 101 109 GRB2 Growth factor receptor-bound protein 2 yes no 2;3 1.5058E-15 148.99 By MS/MS By matching 2 2 12367000 11993000 373650 632 1028 679 1511;1512;1513;1514 1238;1239 1238 2 FHPEPYGLEDDQR GSSVDLHRFHPEPYGL YGLEDDQRSMGYDDLD R F H Q R S 0 1 0 2 0 1 2 1 1 0 1 0 0 1 2 0 0 0 1 0 0 0 13 0 1601.711 C9JZR2;O60716;E9PRE2 C9JZR2 275 287 CTNND1 Catenin delta-1 yes no 2;3 0.001717 72.643 By MS/MS By MS/MS 2 2 4689200 2675000 2014200 633 348 680 1515;1516;1517;1518 1240;1241 1241 2318 2 FHRFLDVNSHK NFAWSNFRFHRFLDVN FLDVNSHKIEKTIEGI R F H H K I 0 1 1 1 0 0 0 0 2 0 1 1 0 2 0 1 0 0 0 1 0 0 11 1 1398.7157 A0A0G2JR45;A0A0G2JRG1;A0A0G2JQX1;A0A0G2JPW5;A0A0G2JSA7;A0A087X1Z1;Q96RT8 A0A0G2JR45 50 60 TUBGCP5 Gamma-tubulin complex component 5 yes no 2 0.0047006 66.692 By MS/MS 1 0 0 0 634 79 681 1519 1242 1242 1 FHSPSTTWSPNKDTPQEK KPRTRRSRFHSPSTTW NKDTPQEKKRPQSPSP R F H E K K 0 0 1 1 0 1 1 0 1 0 0 2 0 1 3 3 3 1 0 0 0 0 18 1 2085.9756 A0A0A0MTP7;F8VXG7;Q99590 A0A0A0MTP7 734 751 SCAF11 Protein SCAF11 yes no 3 0.0023407 71.527 By MS/MS By matching 1 1 5027500 2788900 2238600 635 132 682 1520;1521 1243;1244 1244 163;164 2 FIAVGYVDDTQFVR RPGRGEPRFIAVGYVD VDDTQFVRFDSDAASP R F I V R F 1 1 0 2 0 1 0 1 0 1 0 0 0 2 0 0 1 0 1 3 0 0 14 0 1628.8199 A0A140TA13;A0A140T953;P30685;P30498;P30495;P30491;P30490;P30484;P30464;P18465;P18464;P10319;A0A140T9Z4;A0A140T9M5;Q5SRN7;A0A140T975;A0A140T955;A0A140T941;A0A140T933;A0A140T8W8;A0A0G2JI36;Q9GJ45;A0A140T937;A0A140T9Z6;B0UXQ0;A0A140T9I0;Q5SRN5;A0A140T9X5;A0A140T913;A0A140T8Y4;A0A0G2JIF2;A0A140T912;A0A0G2JPD3;A0A0G2JL56;A0A140T930;Q29940;P30493;P30492;P30512;P30459;P30457;P30456;P30455;P30453;P30450;P30447;P30443;P18462;P16190;P16189;P16188;P13746;P10316;P10314;P05534;P04439;P01892;P01891;Q29960;P30510;P30508;P30504;Q95604 A0A140TA13 46 59 HLA-B;HLA-A;HLA-C HLA class I histocompatibility antigen, B-35 alpha chain;HLA class I histocompatibility antigen, B-78 alpha chain;HLA class I histocompatibility antigen, B-56 alpha chain;HLA class I histocompatibility antigen, B-53 alpha chain;HLA class I histocompatibility antigen, B-52 alpha chain;HLA class I histocompatibility antigen, B-46 alpha chain;HLA class I histocompatibility antigen, B-15 alpha chain;HLA class I histocompatibility antigen, B-57 alpha chain;HLA class I histocompatibility antigen, B-51 alpha chain;HLA class I histocompatibility antigen, B-58 alpha chain;HLA class I histocompatibility antigen, B-59 alpha chain;HLA class I histocompatibility antigen, B-55 alpha chain;HLA class I histocompatibility antigen, B-54 alpha chain;HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-66 alpha chain;HLA class I histocompatibility antigen, A-43 alpha chain;HLA class I histocompatibility antigen, A-36 alpha chain;HLA class I histocompatibility antigen, A-34 alpha chain;HLA class I histocompatibility antigen, A-26 alpha chain;HLA class I histocompatibility antigen, A-23 alpha chain;HLA class I histocompatibility antigen, A-1 alpha chain;HLA class I histocompatibility antigen, A-25 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain;HLA class I histocompatibility antigen, A-30 alpha chain;HLA class I histocompatibility antigen, A-11 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-32 alpha chain;HLA class I histocompatibility antigen, A-24 alpha chain;HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-14 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, Cw-4 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain yes no 2 0.0087056 56.359 By matching By MS/MS 1 1 1203800 649660 554170 636 206 683 1522;1523 1245 1245 1 FIDFLAIEMR LFYLGSAKFIDFLAIE DFLAIEMRKGKVSFLW K F I M R K 1 1 0 1 0 0 1 0 0 2 1 0 1 2 0 0 0 0 0 0 0 0 10 0 1253.6478 A0A087WYF1;A0A087WX80;P24043 A0A087WYF1 2191 2200 LAMA2 Laminin subunit alpha-2 yes no 2 0.0016428 82.287 By MS/MS By MS/MS 1 1 1540700 956870 583870 637 48 684 1524;1525 1246;1247;1248 1246 7 3 FIEDLNMYEASK DLGLEASKFIEDLNMY LNMYEASKDGLFRVDK K F I S K D 1 0 1 1 0 0 2 0 0 1 1 1 1 1 0 1 0 0 1 0 0 0 12 0 1458.6701 C9JRJ5;Q9UGP4 C9JRJ5 14 25 LIMD1 LIM domain-containing protein 1 yes no 2 0.016427 42.395 By matching By MS/MS 1 1 842240 415470 426770 638 339 685 1526;1527 1249 1249 55 2314 0 FIHQQPQSSSPVYGSSAK QWQPSSSRFIHQQPQS PVYGSSAKTSSVSNPQ R F I A K T 1 0 0 0 0 3 0 1 1 1 0 1 0 1 2 5 0 0 1 1 0 0 18 0 1946.9486 F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023 F5H836 77 94 PXN Paxillin yes no 2;3 0.0011126 62.658 By MS/MS By MS/MS 3 3 14861000 8093600 6767400 639 210 686;687 1528;1529;1530;1531;1532;1533 1250;1251;1252;1253;1254;1255 1252 261;262;263;2283 5 FINDYGTHYITSGSMGGIYEYILVIDK YNYGMYAKFINDYGTH EYILVIDKAKMESLGI K F I D K A 0 0 1 2 0 0 1 4 1 5 1 1 1 1 0 2 2 0 4 1 0 0 27 0 3068.4841 P07357 P07357 333 359 C8A Complement component C8 alpha chain yes yes 3 4.7633E-25 92.412 By MS/MS By MS/MS 1 1 19973000 9151800 10821000 640 863 688 1534;1535 1256;1257 1257 137 2 FIQELSGSSPK QQNTQLKRFIQELSGS ELSGSSPKRRRAEDKD R F I P K R 0 0 0 0 0 1 1 1 0 1 1 1 0 1 1 3 0 0 0 0 0 0 11 0 1191.6136 I3L254;Q01664 I3L254 56 66 TFAP4 Transcription factor AP-4 yes no 2 0.0017462 80.231 By MS/MS 1 5891900 5891900 0 641 692 689 1536 1258 1258 818;819 1 FIQELSGSSPKR QQNTQLKRFIQELSGS LSGSSPKRRRAEDKDE R F I K R R 0 1 0 0 0 1 1 1 0 1 1 1 0 1 1 3 0 0 0 0 0 0 12 1 1347.7147 I3L254;Q01664 I3L254 56 67 TFAP4 Transcription factor AP-4 yes no 2;3 0.0013989 91.093 By MS/MS By MS/MS 2 2 2639400 1479500 1159900 642 692 690 1537;1538;1539;1540 1259;1260;1261 1260 818;819 3 FITVGYVDDTLFVR RPGRGEPRFITVGYVD VDDTLFVRFDSDATSP R F I V R F 0 1 0 2 0 0 0 1 0 1 1 0 0 2 0 0 2 0 1 3 0 0 14 0 1643.8559 P30488;P30487;A0A140TA14;A0A140TA11;A0A140T9Y5;A0A140T997;Q04826;P30485;P30483;P30481;P30479;P03989 P30488 46 59 HLA-B HLA class I histocompatibility antigen, B-50 alpha chain;HLA class I histocompatibility antigen, B-49 alpha chain;HLA class I histocompatibility antigen, B-40 alpha chain;HLA class I histocompatibility antigen, B-47 alpha chain;HLA class I histocompatibility antigen, B-45 alpha chain;HLA class I histocompatibility antigen, B-44 alpha chain;HLA class I histocompatibility antigen, B-41 alpha chain;HLA class I histocompatibility antigen, B-27 alpha chain yes no 2 0.00061674 68.069 By MS/MS By MS/MS 1 1 3983000 2989700 993350 643 943 691 1541;1542 1262;1263 1262 1 FIWYNNVINPTLPR VGDLQMVKFIWYNNVI VINPTLPRVGASKIIV K F I P R V 0 1 3 0 0 0 0 0 0 2 1 0 0 1 2 0 1 1 1 1 0 0 14 0 1745.9253 P16233 P16233 417 430 PNLIP Pancreatic triacylglycerol lipase yes yes 2 0.0028338 74.76 By MS/MS By matching 1 1 1985900 1260800 725150 644 903 692 1543;1544 1264 1264 1 FIYEAWQGVER PAHEENVRFIYEAWQG EAWQGVERDLRGQVPG R F I E R D 1 1 0 0 0 1 2 1 0 1 0 0 0 1 0 0 0 1 1 1 0 0 11 0 1396.6776 I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L2L5 34 44 FAM195B Protein FAM195B yes no 2 0.00098453 92.239 By MS/MS By MS/MS 1 1 978890 570500 408390 645 335 693 1545;1546 1265;1266 1266 2312 2 FKDLGEENFK HKSEVAHRFKDLGEEN DLGEENFKALVLIAFA R F K F K A 0 0 1 1 0 0 2 1 0 0 1 2 0 2 0 0 0 0 0 0 0 0 10 1 1225.5979 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;C9JKR2;A0A087WWT3;H7C013 A0A0C4DGB6 35 44 ALB Serum albumin yes no 3 0.0001573 89.679 By MS/MS By matching 1 1 615180 437630 177550 + 646 152 694 1547;1548 1267 1267 1 FLASVSTVLTSK AVHASLDKFLASVSTV VSTVLTSKYR______ K F L S K Y 1 0 0 0 0 0 0 0 0 0 2 1 0 1 0 3 2 0 0 2 0 0 12 0 1251.7075 G3V1N2;P69905 G3V1N2 97 108 HBA2;HBA1 Hemoglobin subunit alpha yes no 2 0.0025591 81.338 By MS/MS By matching 1 1 2116000 1259400 856580 647 549 695 1549;1550 1268;1269 1268 2 FLEESVSMSPEER ESGSTLKKFLEESVSM VSMSPEERARYLENYD K F L E R A 0 1 0 0 0 0 4 0 0 0 1 0 1 1 1 3 0 0 0 1 0 0 13 0 1538.6923 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 86 98 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes no 2 0.0040283 64.394 By MS/MS 1 357080 0 357080 648 15 696 1551 1270 1270 11 1 FLELNSEQNHDDYCLAYVFTDR FPNIGVEKFLELNSEQ LAYVFTDRDFDDGVLG K F L D R D 1 1 2 3 1 1 2 0 1 0 3 0 0 2 0 1 1 0 2 1 0 0 22 0 2748.2126 O14672 O14672 300 321 ADAM10 Disintegrin and metalloproteinase domain-containing protein 10 yes yes 3 0.002375 48.824 By matching By MS/MS 1 1 2360200 1650100 710090 649 762 697 1552;1553 1271 1271 1 FLLADNLYCK STNSMETRFLLADNLY LADNLYCKASVPPTDK R F L C K A 1 0 1 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 10 0 1255.6271 B4DWR3;P61758 B4DWR3 100 109 VBP1 Prefoldin subunit 3 yes no 2 0.00054222 90.37 By MS/MS By matching 1 1 1016800 541680 475150 650 272 698 1554;1555 1272 1272 2300 1 FLLYTNENPNNFQEVAADSSSISGSNFK SPKDVNTRFLLYTNEN SISGSNFKTNRKTRFI R F L F K T 2 0 5 1 0 1 2 1 0 1 2 1 0 3 1 5 1 0 1 1 0 0 28 0 3092.4363 P16233 P16233 55 82 PNLIP Pancreatic triacylglycerol lipase yes yes 3 0.018777 36.577 By MS/MS By matching 1 1 5081800 2940300 2141500 651 903 699 1556;1557 1273 1273 1 FLSHSTDSLNK ENMSNTWKFLSHSTDS HSTDSLNKISKVNEST K F L N K I 0 0 1 1 0 0 0 0 1 0 2 1 0 1 0 3 1 0 0 0 0 0 11 0 1247.6146 Q12802;A0A087WY36;A0A087WTD7;A8MYJ1 Q12802 1925 1935 AKAP13 A-kinase anchor protein 13 yes no 2 0.00044874 98.582 By MS/MS By matching 1 1 3654700 1972900 1681800 652 1066 700 1558;1559 1274 1274 1220;2145 1 FLYGYRHLTQAR F L A R 1 2 0 0 0 1 0 1 1 0 2 0 0 1 0 0 1 0 2 0 0 0 12 1 1523.7997 REV__Q15036 yes yes 3 0.019581 40.278 By MS/MS 1 753400 0 753400 + 653 1537 701 1560 1275 1275 2520 1 FNALQYLR IPDEYFKRFNALQYLR FNALQYLRLSHNELAD R F N L R L 1 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 8 0 1023.5502 P51884 P51884 228 235 LUM Lumican yes yes 2 0.0036918 105.39 By MS/MS By matching 1 1 2942300 2163200 779040 654 996 702 1561;1562 1276 1276 1 FNDSEGDDTEETEDYR DKESGKQKFNDSEGDD TEETEDYRQFRKSVLA K F N Y R Q 0 1 1 4 0 0 4 1 0 0 0 0 0 1 0 1 2 0 1 0 0 0 16 0 1920.7133 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 392 407 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0020257 82.449 By MS/MS By MS/MS 1 1 0 0 0 655 457 703 1563;1564 1277;1278 1278 537;1999 2 FNISSHNQSPK HSFSGVQRFNISSHNQ SSHNQSPKRHSISHSP R F N P K R 0 0 2 0 0 1 0 0 1 1 0 1 0 1 1 3 0 0 0 0 0 0 11 0 1257.6102 Q9H1A4 Q9H1A4 369 379 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 2 0.0061427 66.023 By MS/MS By matching 1 1 1715700 1098600 617100 656 1391 704 1565;1566 1279 1279 1671 1 FNSLNELVDYHR KYFLWVVKFNSLNELV NELVDYHRSTSVSRNQ K F N H R S 0 1 2 1 0 0 1 0 1 0 2 0 0 1 0 1 0 0 1 1 0 0 12 0 1505.7263 P62993 P62993 125 136 GRB2 Growth factor receptor-bound protein 2 yes yes 2;3 9.2048E-20 146.5 By MS/MS By matching 2 1 10127000 9039500 1087700 657 1028 705 1567;1568;1569 1280;1281 1281 2 FNSTEYQVVTR TSVIRVNRFNSTEYQV TEYQVVTRVDKGGALH R F N T R V 0 1 1 0 0 1 1 0 0 0 0 0 0 1 0 1 2 0 1 2 0 0 11 0 1342.6517 Q07954 Q07954 445 455 LRP1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes yes 3 0.013315 48.112 By MS/MS 1 0 0 0 658 1058 706 1570 1282 1282 2443 1 FPVLAQSSGTGK NRPALAAKFPVLAQSS AQSSGTGKPLESWINK K F P G K P 1 0 0 0 0 1 0 2 0 0 1 1 0 1 1 2 1 0 0 1 0 0 12 0 1190.6295 F5GZK9;Q8IZD4 F5GZK9 351 362 DCP1B mRNA-decapping enzyme 1B yes no 2 0.0046763 51.949 By matching By MS/MS 1 1 1373100 593440 779690 659 492 707 1571;1572 1283 1283 579;580;2005 1 FQEQECPPSPEPTR ELVRVIRKFQEQECPP PPSPEPTRKEKDKKGC K F Q T R K 0 1 0 0 1 2 3 0 0 0 0 0 0 1 4 1 1 0 0 0 0 0 14 0 1700.7464 P62070 P62070 178 191 RRAS2 Ras-related protein R-Ras2 yes yes 2 0.00032294 91.355 By MS/MS By MS/MS 1 1 4442500 2495200 1947300 660 1019 708 1573;1574 1284;1285 1285 1168 2 FQEQECPPSPEPTRK ELVRVIRKFQEQECPP PSPEPTRKEKDKKGCH K F Q R K E 0 1 0 0 1 2 3 0 0 0 0 1 0 1 4 1 1 0 0 0 0 0 15 1 1828.8414 P62070 P62070 178 192 RRAS2 Ras-related protein R-Ras2 yes yes 3 0.0028691 64.2 By matching By MS/MS 1 1 4275000 2300900 1974100 661 1019 709 1575;1576 1286 1286 1168 1 FQNALLVR FEQLGEYKFQNALLVR FQNALLVRYTKKVPQV K F Q V R Y 1 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 8 0 959.55525 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 427 434 ALB Serum albumin yes no 2 0.019913 83.377 By MS/MS By matching 1 1 3205000 2416800 788280 + 662 152 710 1577;1578 1287 1287 1 FQSEEQQQTEDELQDK RINKKIEKFQSEEQQQ TEDELQDKIHPFAQTQ K F Q D K I 0 0 0 2 0 5 4 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 16 0 1980.8549 CON__P02666 CON__P02666 33 48 yes yes 2 3.8972E-35 144.15 By MS/MS By MS/MS 1 1 16548000 8011200 8536600 + 663 352 711 1579;1580 1288;1289 1289 418 2 FSGFSAKPNNSGEAPSSPTPK VTSTNPRKFSGFSAKP APSSPTPKRSLSSSKC K F S P K R 2 0 2 0 0 0 1 2 0 0 0 2 0 2 4 5 1 0 0 0 0 0 21 1 2106.0018 P49916;K7ENR9;K7ERZ5 P49916 226 246 LIG3 DNA ligase 3 yes no 3 0.017439 47.546 By MS/MS 1 0 0 0 664 985 712 1581 1290 1290 1 FSGGFGAR SRGRSKSRFSGGFGAR FSGGFGARDYRQSSGA R F S A R D 1 1 0 0 0 0 0 3 0 0 0 0 0 2 0 1 0 0 0 0 0 0 8 0 797.38204 A0A0J9YVQ7;A0A087WVZ1;A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O15523;O00571 A0A0J9YVQ7 110 117 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3Y;ATP-dependent RNA helicase DDX3X yes no 2 0.011296 83.647 By MS/MS By MS/MS 1 1 7070500 4144800 2925700 665 185 713 1582;1583 1291;1292 1291 232 2 FSGSGSGTDFTLK RASGVPDRFSGSGSGT SGTDFTLKISRVEAED R F S L K I 0 0 0 1 0 0 0 3 0 0 1 1 0 2 0 3 2 0 0 0 0 0 13 0 1302.6092 A0A087X0Q4;A2NJV5;A0A0A0MRZ7;A0A075B6S6;A0A075B6S2;A0A075B6P5;A0A087WW87;P06310;P01615;P01614 A0A087X0Q4 69 81 IGKV2-40;IGKV A18;IGKV2D-26;IGKV2D-30;IGKV2D-29;IGKV2D-28 Ig kappa chain V-II region RPMI 6410;Ig kappa chain V-II region FR;Ig kappa chain V-II region Cum yes no 2 1.3832E-09 129.82 By MS/MS By MS/MS 1 1 62508000 57162000 5345700 666 6 714 1584;1585 1293;1294;1295;1296 1294 4 FSILTVNNDITLLK AKVFKNPKFSILTVNN NNDITLLKLATPARFS K F S L K L 0 0 2 1 0 0 0 0 0 2 3 1 0 1 0 1 2 0 0 1 0 0 14 0 1589.9029 H3BTQ4;H3BP92;H3BMY1;J3QKZ2;Q6GPI1;P17538 H3BTQ4 60 73 CTRB2;CTRB1 Chymotrypsinogen B2;Chymotrypsin B2 chain A;Chymotrypsin B2 chain B;Chymotrypsin B2 chain C;Chymotrypsinogen B;Chymotrypsin B chain A;Chymotrypsin B chain B;Chymotrypsin B chain C yes no 2 1.1854E-07 106.01 By MS/MS By MS/MS 1 1 3062800 1693300 1369500 667 637 715 1586;1587 1297;1298 1297 2 FSKEEPVSSGPEEAVGK SGSKKKRKFSKEEPVS GPEEAVGKSSSKKKKK K F S G K S 1 0 0 0 0 0 4 2 0 0 0 2 0 1 2 3 0 0 0 2 0 0 17 1 1775.8578 O00567 O00567 562 578 NOP56 Nucleolar protein 56 yes yes 2;3 8.4307E-06 88.951 By MS/MS By MS/MS 2 2 12222000 6149300 6072200 668 757 716 1588;1589;1590;1591 1299;1300;1301 1299 880;881 3 FSLSPSLGPQASR SPCPPQRRFSLSPSLG SLGPQASRFLPSARSS R F S S R F 1 1 0 0 0 1 0 1 0 0 2 0 0 1 2 4 0 0 0 0 0 0 13 0 1345.699 Q9NYF3 Q9NYF3 231 243 FAM53C Protein FAM53C yes yes 2 0.0088057 54.598 By MS/MS By matching 1 1 1535000 822850 712140 669 1441 717 1592;1593 1302 1302 1746 1 FSPDSQYIDNR KNNYYSSRFSPDSQYI DSQYIDNRSVNSAGLH R F S N R S 0 1 1 2 0 1 0 0 0 1 0 0 0 1 1 2 0 0 1 0 0 0 11 0 1340.5997 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8 Q5VWV2 338 348 PARD3 Partitioning defective 3 homolog yes no 2 0.00055634 99.53 By MS/MS By MS/MS 1 1 5867200 3192700 2674500 670 1178 718 1594;1595 1303;1304 1303 2467 2 FSPPSPPGK TPTVAKHKFSPPSPPG SPPSPPGKPVVTDITE K F S G K P 0 0 0 0 0 0 0 1 0 0 0 1 0 1 4 2 0 0 0 0 0 0 9 0 912.47052 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42 A0A0A0MRA3 11396 11404 TTN Titin yes no 2 0.0046057 77.533 By MS/MS By matching 1 1 2849000 1456600 1392400 671 97 719 1596;1597 1305 1305 121 1 FSSVSSPQPR ASVRSLGRFSSVSSPQ SVSSPQPRSRHPSSSS R F S P R S 0 1 0 0 0 1 0 0 0 0 0 0 0 1 2 4 0 0 0 1 0 0 10 0 1090.5407 Q9P206 Q9P206 337 346 KIAA1522 Uncharacterized protein KIAA1522 yes yes 2 0.0040903 69.346 By MS/MS By matching 1 1 1516500 823900 692650 672 1446 720 1598;1599 1306 1306 1752 1 FSTLTDDPSPR KDDLGPDRFSTLTDDP LTDDPSPRLSAQAQVA R F S P R L 0 1 0 2 0 0 0 0 0 0 1 0 0 1 2 2 2 0 0 0 0 0 11 0 1234.583 Q14C86 Q14C86 1011 1021 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.0028956 72.243 By matching By MS/MS 1 1 727420 364830 362600 673 1111 721 1600;1601 1307 1307 1295 1 FTDKDQQPSGSEGEDDDAEAALKK DDMYGPEKFTDKDQQP DAEAALKKEVGDIKAS K F T K K E 3 0 0 5 0 2 3 2 0 0 1 3 0 1 1 2 1 0 0 0 0 0 24 2 2580.1463 H3BNW0;Q9NXG2 H3BNW0 78 101 THUMPD1 THUMP domain-containing protein 1 yes no 3 1.9715E-05 76.807 By matching By MS/MS 1 1 16226000 7741200 8485200 674 646 722 1602;1603 1308 1308 759;760 1 FTEYSMTSSVMR WSEETKSRFTEYSMTS SMTSSVMRRNEQLTLH R F T M R R 0 1 0 0 0 0 1 0 0 0 0 0 2 1 0 3 2 0 1 1 0 0 12 0 1437.6268 A0A075B6Q4;Q96GA3 A0A075B6Q4 64 75 LTV1 Protein LTV1 homolog yes no 2 0.00072696 99.815 By MS/MS By MS/MS 4 2 5033700 3365100 1668700 675 8 723;724;725 1604;1605;1606;1607;1608;1609 1309;1310;1311;1312;1313;1314 1309 1;2 4;1889;2255 5 FTGSQPFGQGVEHATANK NCLPCPPRFTGSQPFG VEHATANKQVCKPRNP R F T N K Q 2 0 1 0 0 2 1 3 1 0 0 1 0 2 1 1 2 0 0 1 0 0 18 0 1874.8911 P07996 P07996 624 641 THBS1 Thrombospondin-1 yes yes 3 0.0043832 46.873 By MS/MS 1 879600 879600 0 + 676 870 726 1610 1315 1315 1 FVAFSGEGQSLR EEDEAGGRFVAFSGEG SGEGQSLRKKGRKP__ R F V L R K 1 1 0 0 0 1 1 2 0 0 1 0 0 2 0 2 0 0 0 1 0 0 12 0 1296.6463 Q92890 Q92890 290 301 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 0.0074701 58.595 By MS/MS By MS/MS 1 1 2112900 1121700 991240 677 1315 727 1611;1612 1316;1317 1317 1549 2 FVSEGDGGR CPSRGRKRFVSEGDGG VSEGDGGRLKPESY__ R F V G R L 0 1 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 1 0 0 9 0 922.41446 Q53EL6 Q53EL6 455 463 PDCD4 Programmed cell death protein 4 yes yes 2 4.3616E-05 102.95 By MS/MS By MS/MS 2 1 10395000 6970500 3424900 678 1149 728 1613;1614;1615 1318;1319;1320;1321;1322;1323;1324;1325 1324 1338 8 FVSEGDGGRLKPESY CPSRGRKRFVSEGDGG GRLKPESY________ R F V S Y - 0 1 0 1 0 0 2 3 0 0 1 1 0 1 1 2 0 0 1 1 0 0 15 2 1639.7842 Q53EL6 Q53EL6 455 469 PDCD4 Programmed cell death protein 4 yes yes 2 0.0088963 58.626 By matching By MS/MS 1 1 13459000 6073000 7385900 679 1149 729 1616;1617 1326 1326 1338 1 FVSEIVDTVYEDGDSIQVGLVQYNSDPTDEFFLK DSFQEVLRFVSEIVDT PTDEFFLKDFSTKRQI R F V L K D 0 0 1 5 0 2 3 2 0 2 2 1 0 3 1 3 2 0 2 5 0 0 34 0 3867.8255 E7ENL6;P12111 E7ENL6 1054 1087 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.00082175 46.557 By matching By MS/MS 1 1 172940000 75709000 97231000 680 403 730 1618;1619 1327 1327 1 FVTPSEPVAHSR DEMLFTRRFVTPSEPV SEPVAHSRRGRLHLPR R F V S R R 1 1 0 0 0 0 1 0 1 0 0 0 0 1 2 2 1 0 0 2 0 0 12 0 1325.6728 O14654 O14654 399 410 IRS4 Insulin receptor substrate 4 yes yes 2 0.019803 49.356 By MS/MS By matching 1 1 2676500 1436200 1240300 681 761 731 1620;1621 1328 1328 1 FWEVISDEHGIDPTGTYHGDSDLQLDR ________________ DSDLQLDRISVYYNEA M F W D R I 0 1 0 5 0 1 2 3 2 2 2 0 0 1 1 2 2 1 1 1 0 0 27 0 3101.4003 Q5JP53;P07437 Q5JP53 2 28 TUBB Tubulin beta chain yes no 4 0.016174 31.819 By MS/MS By matching 1 1 950190 463940 486240 682 864 732 1622;1623 1329 1329 1 GAAEEAELEDSDDEEKPVKQDDFPK FISAGLKKGAAEEAEL VKQDDFPKDFGPRKLK K G A P K D 3 0 0 5 0 1 6 1 0 0 1 3 0 1 2 1 0 0 0 1 0 0 25 2 2790.2356 F6XM96;Q9UBB9 F6XM96 88 112 TFIP11 Tuftelin-interacting protein 11 yes no 3 0.0025384 52.754 By MS/MS By matching 1 1 13646000 8296000 5350000 683 508 733 1624;1625 1330 1330 600 1 GAEETSWSGEER CSQAAGTKGAEETSWS TSWSGEERAAKVPSTP K G A E R A 1 1 0 0 0 0 4 2 0 0 0 0 0 0 0 2 1 1 0 0 0 0 12 0 1336.5531 Q9H7N4 Q9H7N4 958 969 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.0060247 62.528 By MS/MS By matching 1 1 4762200 2526600 2235600 684 1404 734 1626;1627 1331 1331 1694 1 GAKEEHGGLIRSPR RRSKPLTRGAKEEHGG GGLIRSPRHEKKKKVR R G A P R H 1 2 0 0 0 0 2 3 1 1 1 1 0 0 1 1 0 0 0 0 0 0 14 2 1505.8063 P26368 P26368 68 81 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 3 0.0091121 56.215 By MS/MS By matching 1 1 23407000 10702000 12704000 685 932 735 1628;1629 1332 1332 1050 1 GALHTVSHEDIR LRLDRLHKGALHTVSH TVSHEDIRDIRNSTGS K G A I R D 1 1 0 1 0 0 1 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1333.6739 Q13136;H0YD72;H0YDW2 Q13136 757 768 PPFIA1 Liprin-alpha-1 yes no 2;3 0.0038355 59.75 By MS/MS By MS/MS 2 2 9883300 6635500 3247800 686 1078 736 1630;1631;1632;1633 1333;1334;1335 1333 1239 3 GAMIIYTSGTTGRPK PEQGWRNKGAMIIYTS SGTTGRPKGVLSTHQN K G A P K G 1 1 0 0 0 0 0 3 0 2 0 1 1 0 1 1 3 0 1 0 0 0 15 1 1551.8079 F5GX20;F5H2G6;Q4G176 F5GX20 196 210 ACSF3 Acyl-CoA synthetase family member 3, mitochondrial yes no 3 0.019435 43.594 By matching By MS/MS 1 1 2689700 902920 1786800 687 487 737 1634;1635 1336 1336 2340 0 GAPSSPATGVLPSPQGK SLSRYFRRGAPSSPAT VLPSPQGKSTSLSKAS R G A G K S 2 0 0 0 0 1 0 3 0 0 1 1 0 0 4 3 1 0 0 1 0 0 17 0 1549.81 Q5SRE5 Q5SRE5 1705 1721 NUP188 Nucleoporin NUP188 homolog yes yes 2 0.0013269 73.296 By MS/MS By matching 2 1 4636100 3615400 1020600 688 1162 738;739 1636;1637;1638 1337;1338;1339 1339 1356;1357;1358 3 GASVIPTSR G A S R 1 1 0 0 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 1 0 0 9 0 886.48723 REV__H7C3N7 yes yes 2 0.0045282 78.513 By MS/MS By matching 2 1 37594000 25217000 12377000 + 689 1532 740 1639;1640;1641 1340 1340 1877 1 GAVGLNLQSK DITFLWYKGAVGLNLQ VGLNLQSKTQRSLTAE K G A S K T 1 0 1 0 0 1 0 2 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 985.55564 Q96LA6 Q96LA6 150 159 FCRL1 Fc receptor-like protein 1 yes yes 2 0.0040466 79.201 By MS/MS 1 40468000 40468000 0 690 1341 741 1642 1341 1341 40 1590 1 GCWEVSPTER MANRRVGRGCWEVSPT WEVSPTERRPPAGLRG R G C E R R 0 1 0 0 1 0 2 1 0 0 0 0 0 0 1 1 1 1 0 1 0 0 10 0 1219.5292 A0A087WV76;Q8IZT6 A0A087WV76 9 18 ASPM Abnormal spindle-like microcephaly-associated protein yes no 2 0.00019834 94.82 By MS/MS By matching 1 1 676450 346460 329990 691 33 742 1643;1644 1342 1342 42 1 GDADMYDLPK VVDLNSTRGDADMYDL ADMYDLPKKEDALLYQ R G D P K K 1 0 0 3 0 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 0 0 10 0 1123.4856 Q5HY57;P50402 Q5HY57 34 43 EMD Emerin yes no 2 0.0031751 79.974 By matching By MS/MS 1 1 4841800 1810400 3031400 692 987 743 1645;1646 1343 1343 2427 1 GDEASEEGQNGSSPK TRWLNSGRGDEASEEG GQNGSSPKSKTKWTKE R G D P K S 1 0 1 1 0 1 3 3 0 0 0 1 0 0 1 3 0 0 0 0 0 0 15 0 1490.6121 E7EV99;E7ENY0;P35611;H0Y9H2 E7EV99 453 467 ADD1 Alpha-adducin yes no 2 0.0065012 77.288 By MS/MS 1 0 0 0 693 404 744 1647 1344 1344 452;453 1 GDFIHVMDNSDPNWWK DGELGFRRGDFIHVMD NSDPNWWKGACHGQTG R G D W K G 0 0 2 3 0 0 0 1 1 1 0 1 1 1 1 1 0 2 0 1 0 0 16 0 1959.8574 P62993 P62993 180 195 GRB2 Growth factor receptor-bound protein 2 yes yes 3 0.003742 49.066 By MS/MS 1 585010 585010 0 694 1028 745 1648 1345 1345 1 GDLGIEIPAEK SDGIMVARGDLGIEIP GIEIPAEKVFLAQKMM R G D E K V 1 0 0 1 0 0 2 2 0 2 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1140.6027 B4DNK4;P14618;H3BTN5;H3BR70;P30613 B4DNK4 221 231 PKM;PKLR Pyruvate kinase;Pyruvate kinase PKM;Pyruvate kinase PKLR yes no 2 0.0082745 68.847 By MS/MS 1 652070 652070 0 695 266 746 1649 1346 1346 1 GDQPAASGDSDDDEPPPLPR FLLYKIVRGDQPAASG DEPPPLPRLKRRDFTP R G D P R L 2 1 0 5 0 1 1 2 0 0 1 0 0 0 5 2 0 0 0 0 0 0 20 0 2034.8767 O00264 O00264 48 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 0.00014845 78.354 By matching By MS/MS 1 1 2098700 1255000 843750 696 752 747 1650;1651 1347 1347 871;872 1 GDREEEVERPVSSPGDPEQK GDLELDERGDREEEVE SPGDPEQKKLDPLEGL R G D Q K K 0 2 0 2 0 1 5 2 0 0 0 1 0 0 3 2 0 0 0 2 0 0 20 2 2239.0353 O43149 O43149 2432 2451 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 3 0.0099752 51.535 By MS/MS By matching 1 1 2673300 1719100 954230 697 775 748 1652;1653 1348 1348 901 1 GDVTAEEAAGASPAK SQSSKAPRGDVTAEEA AAGASPAKANGQENGH R G D A K A 5 0 0 1 0 0 2 2 0 0 0 1 0 0 1 1 1 0 0 1 0 0 15 0 1372.647 P49006 P49006 11 25 MARCKSL1 MARCKS-related protein yes yes 2 4.1673E-174 195.5 By MS/MS By MS/MS 1 1 25521000 12428000 13093000 698 974 749 1654;1655 1349;1350;1351 1351 1114 3 GDVTAEEAAGASPAKANGQENGHVK SQSSKAPRGDVTAEEA GQENGHVKSNGDLSPK R G D V K S 6 0 2 1 0 1 3 4 1 0 0 2 0 0 1 1 1 0 0 2 0 0 25 1 2407.1364 P49006 P49006 11 35 MARCKSL1 MARCKS-related protein yes yes 3;4 3.6832E-20 94.176 By MS/MS By MS/MS 5 3 37433000 32588000 4845400 699 974 750;751;752 1656;1657;1658;1659;1660;1661;1662;1663 1352;1353;1354;1355;1356;1357;1358;1359;1360 1356 13;34 1114 9 GEAAAERPGEAAVASSPSK QFSKTAAKGEAAAERP AVASSPSKANGQENGH K G E S K A 6 1 0 0 0 0 3 2 0 0 0 1 0 0 2 3 0 0 0 1 0 0 19 1 1783.8701 P29966 P29966 12 30 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.003713 54.058 By MS/MS By MS/MS 1 1 5519000 3222200 2296800 700 939 753 1664;1665 1361;1362 1362 1060;1061 2 GEAAAERPGEAAVASSPSKANGQENGHVK QFSKTAAKGEAAAERP GQENGHVKVNGDASPA K G E V K V 7 1 2 0 0 1 4 4 1 0 0 2 0 0 2 3 0 0 0 2 0 0 29 2 2818.3594 P29966 P29966 12 40 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 4 0.0014968 45.489 By matching By MS/MS 1 1 4862600 2536800 2325800 701 939 754 1666;1667 1363 1363 1060;1061 1 GEEGSDDDETENGPKPK KKRRRHPKGEEGSDDD TENGPKPKKRRPPKAE K G E P K K 0 0 1 3 0 0 4 3 0 0 0 2 0 0 2 1 1 0 0 0 0 0 17 1 1802.7442 Q6PD62 Q6PD62 966 982 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 2 1.3879E-05 69.878 By MS/MS 1 1026100 1026100 0 702 1199 755 1668 1364 1364 1405 0 GEFSASPMLK RSPIRQDRGEFSASPM FSASPMLKSGMSPEQS R G E L K S 1 0 0 0 0 0 1 1 0 0 1 1 1 1 1 2 0 0 0 0 0 0 10 0 1065.5165 Q9UQ35 Q9UQ35 1119 1128 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0033974 71.153 By MS/MS By MS/MS 2 2 7070700 4012000 3058700 703 1487 756;757 1669;1670;1671;1672 1365;1366;1367 1367 255 1803 3 GEPAAAAAPEAGASPVEK ASPSAAEKGEPAAAAA AGASPVEKEAPAEGEA K G E E K E 7 0 0 0 0 0 3 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 18 0 1621.7948 P29966 P29966 88 105 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 3.4418E-09 91.622 By matching By MS/MS 1 1 6200100 2282100 3918100 704 939 758 1673;1674 1368 1368 1062 1 GEPNVSYICSR GSAKQLVRGEPNVSYI NVSYICSRYYRAPELI R G E S R Y 0 1 1 0 1 0 1 1 0 1 0 0 0 0 1 2 0 0 1 1 0 0 11 0 1280.5819 P49840;A8MT37;P49841 P49840 273 283 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 2 1.4153E-06 134.84 By MS/MS By MS/MS 1 1 16971000 8964600 8006600 705 982;983 759 1675;1676 1369;1370;1371;1372 1371 1129;2424 4 GEQVSQNGLPAEQGSPR QQQWDTSKGEQVSQNG PAEQGSPRMAETVDTS K G E P R M 1 1 1 0 0 3 2 3 0 0 1 0 0 0 2 2 0 0 0 1 0 0 17 0 1752.8391 A0A087WUZ3;Q01082 A0A087WUZ3 2126 2142 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.0045412 54.355 By matching By MS/MS 1 1 1042200 453550 588620 706 32 760 1677;1678 1373 1373 39 1 GEVPPKETPK PSQGAEAKGEVPPKET VPPKETPKKKKKFSFK K G E P K K 0 0 0 0 0 0 2 1 0 0 0 2 0 0 3 0 1 0 0 1 0 0 10 1 1080.5815 P49006 P49006 78 87 MARCKSL1 MARCKS-related protein yes yes 2;3 5.5706E-05 105.36 By MS/MS By MS/MS 6 5 24716000 12287000 12429000 707 974 761 1679;1680;1681;1682;1683;1684;1685;1686;1687;1688;1689 1374;1375;1376;1377;1378;1379;1380;1381;1382;1383;1384;1385;1386;1387;1388 1376 2130 15 GEVPPKETPKK PSQGAEAKGEVPPKET PPKETPKKKKKFSFKK K G E K K K 0 0 0 0 0 0 2 1 0 0 0 3 0 0 3 0 1 0 0 1 0 0 11 2 1208.6765 P49006 P49006 78 88 MARCKSL1 MARCKS-related protein yes yes 3 1.087E-06 130.19 By MS/MS By MS/MS 1 1 27444000 17101000 10343000 708 974 762 1690;1691 1389;1390;1391 1389 2130 3 GEWTCIAYSQLR CTCVGNGRGEWTCIAY CIAYSQLRDQCIVDDI R G E L R D 1 1 0 0 1 1 1 1 0 1 1 0 0 0 0 1 1 1 1 0 0 0 12 0 1482.6925 P02751 P02751 504 515 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 0.0027946 80.596 By MS/MS By MS/MS 1 1 1700700 1145300 555360 709 843 763 1692;1693 1392;1393 1392 2 GEYVLLEAALTDLR TNFTFNGRGEYVLLEA EAALTDLRVQARAQPG R G E L R V 2 1 0 1 0 0 2 1 0 0 4 0 0 0 0 0 1 0 1 1 0 0 14 0 1561.8352 Q9UGT4 Q9UGT4 469 482 SUSD2 Sushi domain-containing protein 2 yes yes 2 0.0035828 70.488 By matching By MS/MS 1 1 2555500 1370900 1184600 710 1454 764 1694;1695 1394 1394 1 GFAFVQYVNER IVGCSVHKGFAFVQYV FVQYVNERNARAAVAG K G F E R N 1 1 1 0 0 1 1 1 0 0 0 0 0 2 0 0 0 0 1 2 0 0 11 0 1328.6513 G3V4W0;B4DY08;B2R5W2;G3V4C1;G3V2Q1;P07910;G3V4M8;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V555;G3V575;G3V576 G3V4W0 51 61 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2 0.015019 61.593 By MS/MS By matching 1 1 1175400 662920 512460 711 259 765 1696;1697 1395 1395 1 GFAFVTFDDHDSVDK DRGSGKKRGFAFVTFD DDHDSVDKIVIQKYHT R G F D K I 1 0 0 4 0 0 0 1 1 0 0 1 0 3 0 1 1 0 0 2 0 0 15 0 1698.7526 F8W6I7;P09651;F8VTQ5;H0YH80;F8VZ49;Q32P51 F8W6I7 147 161 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 3 0.0035618 50.108 By MS/MS By MS/MS 1 1 1001900 553080 448830 712 527 766 1698;1699 1396;1397 1396 2 GFEVVYMTEPIDEYCVQQLK FVERVRKRGFEVVYMT EYCVQQLKEFDGKSLV R G F L K E 0 0 0 1 1 2 3 1 0 1 1 1 1 1 1 0 1 0 2 3 0 0 20 0 2447.1389 P08238 P08238 507 526 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.0023676 53.773 By matching By MS/MS 1 1 898350 669300 229050 713 871 767 1700;1701 1398 1398 143 1 GFGFVDFNSEEDAK DRETGSSKGFGFVDFN FNSEEDAKAAKEAMED K G F A K A 1 0 1 2 0 0 2 2 0 0 0 1 0 3 0 1 0 0 0 1 0 0 14 0 1560.6733 P19338;H7BY16 P19338 611 624 NCL Nucleolin yes no 2 0.00023707 85.958 By MS/MS By matching 1 1 1510800 881140 629670 714 914 768 1702;1703 1399 1399 1 GFLLLASLR VDAVRAEKGFLLLASL FLLLASLRQMKKTRGT K G F L R Q 1 1 0 0 0 0 0 1 0 0 4 0 0 1 0 1 0 0 0 0 0 0 9 0 988.60695 P07996;CON__Q28194 P07996 87 95 THBS1 Thrombospondin-1 yes no 2 0.0045546 113.89 By MS/MS By MS/MS 1 1 3383000 2299000 1084000 + 715 870 769 1704;1705 1400;1401 1400 2 GFSDSGGGPPAK RGSLLLRRGFSDSGGG SGGGPPAKQRDLEGAV R G F A K Q 1 0 0 1 0 0 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 12 0 1075.4934 G3V5F0;G3V579;Q9H307 G3V5F0 64 75 PNN Pinin yes no 2 7.4221E-05 101.72 By MS/MS By MS/MS 1 1 5487600 2940500 2547100 716 563 770 1706;1707 1402;1403;1404 1403 663 3 GFSYLYGAWGR SVVQLNWRGFSYLYGA YLYGAWGRDYSPQHPN R G F G R D 1 1 0 0 0 0 0 3 0 0 1 0 0 1 0 1 0 1 2 0 0 0 11 0 1275.6037 Q6UX06 Q6UX06 266 276 OLFM4 Olfactomedin-4 yes yes 2 0.0009979 90.657 By MS/MS By matching 1 1 3950600 2809800 1140800 717 1206 771 1708;1709 1405 1405 1 GFTDSPHYSDHLNDSR RQKGQRIKGFTDSPHY SDHLNDSRLGAHEGLS K G F S R L 0 1 1 3 0 0 0 1 2 0 1 0 0 1 1 3 1 0 1 0 0 0 16 0 1846.7871 B4DGI9;Q99081;H0YNQ5 B4DGI9 71 86 TCF12 Transcription factor 12 yes no 3 0.0045831 50.102 By MS/MS 1 522020 522020 0 718 263 772 1710 1406 1406 331 1 GGAAGGALPTSPGPALGAK ________________ PGPALGAKGALKAGVG R G G A K G 5 0 0 0 0 0 0 6 0 0 2 1 0 0 3 1 1 0 0 0 0 0 19 0 1548.826 Q9UPR0 Q9UPR0 7 25 PLCL2 Inactive phospholipase C-like protein 2 yes yes 2 0.002473 60.918 By MS/MS 1 1465800 1465800 0 719 1481 773 1711 1407 1407 1791 1 GGDSIGETPTPGASK AETPRTDRGGDSIGET TPTPGASKRKSRWDET R G G S K R 1 0 0 1 0 0 1 4 0 1 0 1 0 0 2 2 2 0 0 0 0 0 15 0 1372.647 O75533 O75533 319 333 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.00057626 63.894 By MS/MS By matching 1 1 1582800 854240 728600 720 799 774 1712;1713 1408 1408 2083;2084 1 GGGTPDANSLAPPGK FPPNSSGRGGGTPDAN NSLAPPGKAGGGSGPQ R G G G K A 2 0 1 1 0 0 0 4 0 0 1 1 0 0 3 1 1 0 0 0 0 0 15 0 1337.6575 Q5T171;Q9BRQ0 Q5T171 262 276 PYGO2 Pygopus homolog 2 yes no 2 0.0060139 61.649 By MS/MS By MS/MS 1 1 5230600 2893600 2337000 721 1166 775 1714;1715 1409;1410 1409 2176 2 GGLLTSEEDSGFSTSPK KLNRCAIKGGLLTSEE SGFSTSPKDNSLPKKK K G G P K D 0 0 0 1 0 0 2 3 0 0 2 1 0 1 1 4 2 0 0 0 0 0 17 0 1710.7948 Q9UQR1 Q9UQR1 292 308 ZNF148 Zinc finger protein 148 yes yes 2 0.0017558 69.451 By matching By MS/MS 1 1 1998900 973250 1025600 722 1491 776 1716;1717 1411 1411 1820;1821;2239 1 GGLSPANDTGAK EEDNSYNRGGLSPAND PANDTGAKKKKKKQKK R G G A K K 2 0 1 1 0 0 0 3 0 0 1 1 0 0 1 1 1 0 0 0 0 0 12 0 1086.5306 K7EN42;B7Z8J4;P30419 K7EN42 43 54 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes no 2 0.0046831 68.168 By MS/MS By MS/MS 1 1 9328300 4931200 4397200 723 291 777 1718;1719 1412;1413;1414 1414 349 3 GGNLPPVSPNDSGAK IIIKASAKGGNLPPVS SPNDSGAKIASNPLER K G G A K I 1 0 2 1 0 0 0 3 0 0 1 1 0 0 3 2 0 0 0 1 0 0 15 0 1408.6947 A0A087X0F1;Q9UK61 A0A087X0F1 461 475 FAM208A Protein FAM208A yes no 2 0.010539 49.066 By MS/MS By matching 2 1 2342700 1486800 855910 724 69 778 1720;1721;1722 1415;1416 1416 78 2 GGPGKLSPR DFALPSSRGGPGKLSP GPGKLSPRKGVSQTGT R G G P R K 0 1 0 0 0 0 0 3 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 867.49265 Q12888 Q12888 1356 1364 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 2 0.0016363 94.538 By MS/MS By MS/MS 1 1 7030300 3673700 3356600 725 1069 779 1723;1724 1417;1418 1418 1222 2 GGSGSGPTIEEVD GFGAQGPKGGSGSGPT GPTIEEVD________ K G G V D - 0 0 0 1 0 0 2 4 0 1 0 0 0 0 1 2 1 0 0 1 0 0 13 0 1203.5255 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 630 642 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.0014681 80.014 By MS/MS By matching 2 2 5017100 2689200 2327900 726 176 780 1725;1726;1727;1728 1419;1420 1420 220 2 GGSGSHNWGTVKDELTESPK GLKHEDKRGGSGSHNW DELTESPKYIQKQISY R G G P K Y 0 0 1 1 0 0 2 4 1 0 1 2 0 0 1 3 2 1 0 1 0 0 20 1 2084.9763 Q8NC51 Q8NC51 217 236 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3 1.046E-08 87.92 By MS/MS By MS/MS 1 1 42090000 27481000 14609000 727 1264 781 1729;1730 1421;1422 1421 1488;2193 2 GGSGSHNWGTVKDELTESPKYIQK GLKHEDKRGGSGSHNW ESPKYIQKQISYNYSD R G G Q K Q 0 0 1 1 0 1 2 4 1 1 1 3 0 0 1 3 2 1 1 1 0 0 24 2 2617.2772 Q8NC51 Q8NC51 217 240 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 4 0.0035538 50.232 By MS/MS By matching 1 1 1339100 915190 423930 728 1264 782 1731;1732 1423 1423 1488;2193 1 GGSISVQVNSIKFDSE KKKRGSYRGGSISVQV NSIKFDSE________ R G G S E - 0 0 1 1 0 1 1 2 0 2 0 1 0 1 0 4 0 0 0 2 0 0 16 1 1665.821 A0A0A0MRM9;Q14978 A0A0A0MRM9 693 708 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 2.0855E-163 189.52 By MS/MS By MS/MS 1 1 17132000 7825700 9306000 729 106 783 1733;1734 1424;1425;1426;1427;1428 1424 131 5 GGVTGSPEASISGSK NFSKPKGKGGVTGSPE EASISGSKGDLKSSKA K G G S K G 1 0 0 0 0 0 1 4 0 1 0 1 0 0 1 4 1 0 0 1 0 0 15 0 1332.6521 Q09666 Q09666 5726 5740 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0014795 69.878 By MS/MS By MS/MS 1 1 2609000 1329000 1280000 730 1063 784 1735;1736 1429;1430 1430 1216;1217 2 GHPHSASSPSER NNSSSETRGHPHSASS SASSPSERVFPMPLPR R G H E R V 1 1 0 0 0 0 1 1 2 0 0 0 0 0 2 4 0 0 0 0 0 0 12 0 1247.5643 C9JZP1;C9J470;E9PHA2;Q15003 C9JZP1 21 32 NCAPH Condensin complex subunit 2 yes no 2 0.0048745 67.749 By MS/MS By matching 1 1 1800400 1289200 511190 731 319 785 1737;1738 1431 1431 383 1 GHTASESDEQQWPEEK GSQRSRKRGHTASESD EQQWPEEKRLKEDILE R G H E K R 1 0 0 1 0 2 4 1 1 0 0 1 0 0 1 2 1 1 0 0 0 0 16 0 1856.7813 Q9NTI5;A9IYQ1 Q9NTI5 1253 1268 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 0.0074815 50.95 By MS/MS By matching 1 1 13741000 7642000 6098600 732 1427 786 1739;1740 1432 1432 1730;1731 1 GHTASESDEQQWPEEKR GSQRSRKRGHTASESD QQWPEEKRLKEDILEN R G H K R L 1 1 0 1 0 2 4 1 1 0 0 1 0 0 1 2 1 1 0 0 0 0 17 1 2012.8824 Q9NTI5;A9IYQ1 Q9NTI5 1253 1269 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 0.0042372 60.541 By MS/MS By matching 1 1 7839700 4765100 3074600 733 1427 787 1741;1742 1433 1433 1730;1731 1 GIDVQQVSLVINYDLPTNR ITTDLLARGIDVQQVS NYDLPTNRENYIHRSR R G I N R E 0 1 2 2 0 2 0 1 0 2 2 0 0 0 1 1 1 0 1 3 0 0 19 0 2143.1273 E7EQG2;P60842;Q14240 E7EQG2 336 354 EIF4A2;EIF4A1 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 3 0.00095205 63.337 By MS/MS 1 942160 0 942160 734 409 788 1743 1434 1434 1 GIITDSFGR TIGVKDGRGIITDSFG IITDSFGRHRRALSTT R G I G R H 0 1 0 1 0 0 0 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 9 0 964.49779 C9JUH3;A0A0A0MT72;Q9BSQ5 C9JUH3 282 290 CCM2 Cerebral cavernous malformations 2 protein yes no 2 0.0089824 68.355 By MS/MS By MS/MS 1 1 1335400 840580 494780 735 128 789 1744;1745 1435;1436 1436 160 2 GILAADESTGSIAK HRIVAPGKGILAADES ESTGSIAKRLQSIGTE K G I A K R 3 0 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 14 0 1331.6933 H3BUH7;H3BQN4;J3KPS3;P04075;H3BPS8 H3BUH7 29 42 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0024993 66.285 By MS/MS By MS/MS 1 1 1351000 766490 584530 736 654 790 1746;1747 1437;1438 1438 770;2050 2 GILSLPHQASPVSR PTSPLNNKGILSLPHQ HQASPVSRTPSLPAVD K G I S R T 1 1 0 0 0 1 0 1 1 1 2 0 0 0 2 3 0 0 0 1 0 0 14 0 1460.81 O75925 O75925 494 507 PIAS1 E3 SUMO-protein ligase PIAS1 yes yes 2 0.0086094 52.5 By MS/MS By matching 1 1 2435700 1319400 1116300 737 803 791 1748;1749 1439 1439 945 1 GISPIVFDR KKERKRARGISPIVFD ISPIVFDRSGSSASES R G I D R S 0 1 0 1 0 0 0 1 0 2 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1002.5498 J3QR07;Q96MU7 J3QR07 306 314 YTHDC1 YTH domain-containing protein 1 yes no 2 0.0036788 82.417 By MS/MS By MS/MS 1 1 2244400 1221600 1022800 738 716 792 1750;1751 1440;1441 1441 841 2 GKASPFEEDQNR GPEKGDQKGKASPFEE PFEEDQNRDLKQGDDD K G K N R D 1 1 1 1 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 12 1 1376.6321 C9JW01;A0A0C4DG68;A0A0A0MR59;Q8TB72 C9JW01 133 144 PUM2 Pumilio homolog 2 yes no 2 0.0072229 69.03 By matching By MS/MS 1 1 3207200 1992700 1214500 739 95 793 1752;1753 1442 1442 117 1 GKDSLSDDGVDLK ________________ SDDGVDLKTQPVRNTE K G K L K T 0 0 0 4 0 0 0 2 0 0 2 2 0 0 0 2 0 0 0 1 0 0 13 1 1347.6518 P07948;E5RJ37 P07948 8 20 LYN Tyrosine-protein kinase Lyn yes no 2 0.00054411 89.506 By MS/MS By MS/MS 1 1 6861500 3578300 3283200 740 869 794 1754;1755 1443;1444 1443 998 2 GKGSPRPQAPK EEEEEKLKGKGSPRPQ SPRPQAPKANGTSALT K G K P K A 1 1 0 0 0 1 0 2 0 0 0 2 0 0 3 1 0 0 0 0 0 0 11 2 1121.6305 A0A0A0MRM9;Q14978 A0A0A0MRM9 544 554 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2;3 0.0024374 83.243 By MS/MS By MS/MS 2 1 20720000 17085000 3634900 741 106 795 1756;1757;1758 1445;1446 1445 132 2 GKLEAIITPPPAK LAKKRGSKGKLEAIIT IITPPPAKKAKSPSQK K G K A K K 2 0 0 0 0 0 1 1 0 2 1 2 0 0 3 0 1 0 0 0 0 0 13 1 1333.7969 D6RCF2;O75367 D6RCF2 122 134 H2AFY Histone H2A;Core histone macro-H2A.1 yes no 2 0.0082262 76.282 By MS/MS By MS/MS 1 1 1636900 803000 833930 742 375 796 1759;1760 1447;1448 1448 1967 2 GKLSAEENPDDSEVPSSSGINSTK EKKSLQEKGKLSAEEN SSGINSTKSQDKDVNE K G K T K S 1 0 2 2 0 0 3 2 0 1 1 2 0 0 2 6 1 0 0 1 0 0 24 1 2447.13 Q9Y5Q9 Q9Y5Q9 40 63 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 3 0.00063356 66.014 By MS/MS 1 6517200 0 6517200 743 1514 797 1761 1449 1449 1858 1 GKSPVPKSPVEEK PKSPVEEKGKSPVPKS PKSPVEEKGKSPVPKS K G K E K G 0 0 0 0 0 0 2 1 0 0 0 3 0 0 3 2 0 0 0 2 0 0 13 2 1380.7613 P07197 P07197 626 638 NEFM Neurofilament medium polypeptide yes no 2 0.0032793 65.511 By MS/MS By matching 1 1 1704400 1082000 622330 744 862 798 1762;1763 1450 1450 990;991 0 GKTPEEIRK KTVANMIKGKTPEEIR KTPEEIRKTFNIK___ K G K R K T 0 1 0 0 0 0 2 1 0 1 0 2 0 0 1 0 1 0 0 0 0 0 9 2 1056.5928 E7ERH2;F8W8N3;E5RJR5;P63208 E7ERH2 129 137 SKP1 S-phase kinase-associated protein 1 yes no 3 0.0046777 65.465 By MS/MS 1 1790400 1790400 0 745 395 799 1764 1451 1451 1973 1 GLAAGSAETLPANFR KFRPKDIRGLAAGSAE ETLPANFRVTSSMSSP R G L F R V 4 1 1 0 0 0 1 2 0 0 2 0 0 1 1 1 1 0 0 0 0 0 15 0 1473.7576 Q13136 Q13136 1151 1165 PPFIA1 Liprin-alpha-1 yes yes 2 7.6207E-08 105.17 By MS/MS By MS/MS 1 1 12309000 7609600 4699700 746 1078 800 1765;1766 1452;1453 1452 2149 2 GLAEVQQDGEAEEGATSDGEKKR EEITCLEKGLAEVQQD TSDGEKKREGVTPWAS K G L K R E 3 1 0 2 0 2 5 4 0 0 1 2 0 0 0 1 1 0 0 1 0 0 23 2 2403.115 Q02952 Q02952 582 604 AKAP12 A-kinase anchor protein 12 yes yes 3 0.00024214 70.413 By MS/MS By MS/MS 1 1 14395000 8136300 6258300 747 1045 801 1767;1768 1454;1455 1455 1194;2141 2 GLAFIQDPDGYWIEILNPNK KPDDGKMKGLAFIQDP IEILNPNKMATLM___ K G L N K M 1 0 2 2 0 1 1 2 0 3 2 1 0 1 2 0 0 1 1 0 0 0 20 0 2302.1634 Q04760 Q04760 160 179 GLO1 Lactoylglutathione lyase yes yes 2 0.0092293 58.674 By MS/MS 1 4053600 4053600 0 748 1050 802 1769 1456;1457 1457 2 GLAGPPASPGK GTPTLPPKGLAGPPAS GPPASPGKAQPPKPER K G L G K A 2 0 0 0 0 0 0 3 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 0 950.51853 Q9P206 Q9P206 538 548 KIAA1522 Uncharacterized protein KIAA1522 yes yes 2 0.0063891 65.563 By MS/MS By MS/MS 1 1 1434400 898640 535760 749 1446 803 1770;1771 1458;1459 1458 1753 2 GLAPNTPGK PRTPSKRRGLAPNTPG LAPNTPGKARKLNTTT R G L G K A 1 0 1 0 0 0 0 2 0 0 1 1 0 0 2 0 1 0 0 0 0 0 9 0 853.46577 G3V3N7;O43663;H0YL53 G3V3N7 93 101 PRC1 Protein regulator of cytokinesis 1 yes no 2 0.01033 78.098 By MS/MS 1 0 0 0 750 557 804 1772 1460 1460 2025 1 GLCAIAQAESLR YAEKVATRGLCAIAQA IAQAESLRYKLLGGLA R G L L R Y 3 1 0 0 1 1 1 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1287.6605 P23396;F2Z2S8;H0YF32;H0YCJ7 P23396 95 106 RPS3 40S ribosomal protein S3 yes no 2 0.010505 63.076 By MS/MS 1 282450 282450 0 751 927 805 1773 1461 1461 1 GLDKEVSYNWDPK LPGKFLGRGLDKEVSY VSYNWDPKDAASKPSG R G L P K D 0 0 1 2 0 0 1 1 0 0 1 2 0 0 1 1 0 1 1 1 0 0 13 1 1549.7413 O14654 O14654 840 852 IRS4 Insulin receptor substrate 4 yes yes 2;3 2.5878E-09 127.51 By MS/MS By MS/MS 2 2 4461400 2865100 1596300 752 761 806 1774;1775;1776;1777 1462;1463;1464;1465 1462 889;2377 4 GLGHPPSSPLLK SPPGFSAKGLGHPPSS PPSSPLLKKTPLALAG K G L L K K 0 0 0 0 0 0 0 2 1 0 3 1 0 0 3 2 0 0 0 0 0 0 12 0 1201.6819 B9EGQ5;M0QXA7;O95785 B9EGQ5 157 168 WIZ Protein Wiz yes no 2 0.0032455 71.153 By MS/MS By MS/MS 1 1 2729100 1464400 1264800 753 305 807 1778;1779 1466;1467;1468;1469 1466 361;362 4 GLGPPSPPAPPR SLPGSPSRGLGPPSPP PSPPAPPRGPAGEAGA R G L P R G 1 1 0 0 0 0 0 2 0 0 1 0 0 0 6 1 0 0 0 0 0 0 12 0 1141.6244 A0A140TA73;Q13425 A0A140TA73 90 101 SNTB2 Beta-2-syntrophin yes no 2 0.0050421 66.989 By MS/MS By MS/MS 1 1 3614300 1786800 1827500 754 208 808 1780;1781 1470;1471 1471 258 2 GLGTDEDSLIEIICSR SELKASMKGLGTDEDS LIEIICSRTNQELQEI K G L S R T 0 1 0 2 1 0 2 2 0 3 2 0 0 0 0 2 1 0 0 0 0 0 16 0 1776.8564 H0YMD0;H0YMU9;H0YN42;P07355;H0YMM1;H0YKS4;H0YNA0;H0YN28;H0YL33;H0YNP5;H0YM50;A6NMY6;H0YLE2;H0YN52 H0YMD0 120 135 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 2 0.002513 74.326 By MS/MS 1 1278700 0 1278700 755 628 809 1782 1472 1472 1 GLKEGMNPSYDEYADSDEDQHDAYLER KKLNIKNRGLKEGMNP QHDAYLERMKEEGKIR R G L E R M 2 1 1 5 0 1 4 2 1 0 2 1 1 0 1 2 0 0 3 0 0 0 27 1 3146.3047 Q08945 Q08945 429 455 SSRP1 FACT complex subunit SSRP1 yes yes 3;4 4.7446E-06 60.814 By MS/MS By MS/MS 2 2 25235000 14420000 10815000 756 1060 810 1783;1784;1785;1786 1473;1474 1474 1213 2 GLKPGVVYEGQLISIQQYGHQEVTR HLNSYTIKGLKPGVVY YGHQEVTRFDFTTTST K G L T R F 0 1 0 0 0 4 2 4 1 2 2 1 0 0 1 1 1 0 2 3 0 0 25 1 2798.4715 P02751 P02751 670 694 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 4 5.6493E-05 56.485 By MS/MS By MS/MS 1 1 2010700 1381200 629510 757 843 811 1787;1788 1475;1476 1475 2 GLLYDSDEEDEERPAR RGLGRMRRGLLYDSDE EDEERPARKRRQVERA R G L A R K 1 2 0 3 0 0 4 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 16 1 1892.8388 P49736 P49736 134 149 MCM2 DNA replication licensing factor MCM2 yes yes 2 1.2164E-15 108.58 By MS/MS 1 132630000 132630000 0 758 978 812 1789 1477 1477 1118 1 GLMAGGRPEGQYSEDEDTDTDEYKEAK AAGLLAARGLMAGGRP TDEYKEAKASINPVTG R G L A K A 2 1 0 4 0 1 5 4 0 0 1 2 1 0 1 1 2 0 2 0 0 0 27 2 2990.2724 H0YE35;H0YC88;Q9NPQ8 H0YE35 32 58 RIC8A Synembryn-A yes no 3 1.0585E-05 58.952 By MS/MS By matching 1 1 9998500 7000600 2997900 759 611 813 1790;1791 1478 1478 99 733 1 GLNSSFETSPK SSFQGSKRGLNSSFET SSFETSPKKVKWSSTV R G L P K K 0 0 1 0 0 0 1 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 11 0 1165.5615 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63 M0QZ79 51 61 VRK3 Inactive serine/threonine-protein kinase VRK3 yes no 2 5.3389E-06 130.69 By MS/MS By MS/MS 1 1 4903200 2523700 2379400 760 742 814 1792;1793 1479;1480;1481 1479 860 3 GLQHLYALVLVNNK ELRKDDFKGLQHLYAL ALVLVNNKISKIHEKA K G L N K I 1 0 2 0 0 1 0 1 1 0 4 1 0 0 0 0 0 0 1 2 0 0 14 0 1580.9039 P21810 P21810 112 125 BGN Biglycan yes yes 2;3 0.00043451 93.096 By MS/MS By MS/MS 2 2 4571800 3441200 1130600 761 921 815 1794;1795;1796;1797 1482;1483;1484 1483 3 GLSDHVSLDGQELGTR CDSVEHLRGLSDHVSL DGQELGTRSGGRRGSD R G L T R S 0 1 0 2 0 1 1 3 1 0 3 0 0 0 0 2 1 0 0 1 0 0 16 0 1682.8224 Q7L8J4 Q7L8J4 356 371 SH3BP5L SH3 domain-binding protein 5-like yes yes 3 0.0044504 50.305 By MS/MS By matching 1 1 885680 526790 358890 762 1216 816 1798;1799 1485 1485 1427 1 GLSEDTTEETLK PSKTLFVKGLSEDTTE DTTEETLKESFDGSVR K G L L K E 0 0 0 1 0 0 3 1 0 0 2 1 0 0 0 1 3 0 0 0 0 0 12 0 1321.6249 P19338;H7BY16 P19338 578 589 NCL Nucleolin yes no 2 0.00076115 96.067 By MS/MS By MS/MS 1 1 1751300 763550 987720 763 914 817 1800;1801 1486;1487 1486 1036 2 GLSVDSAQEVK SVSSSIKRGLSVDSAQ VDSAQEVKRFRTATGA R G L V K R 1 0 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 11 0 1131.5772 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1771 1781 TRRAP Transformation/transcription domain-associated protein yes no 2 4.6717E-06 117.95 By MS/MS By matching 1 1 3479100 1934700 1544400 764 480 818 1802;1803 1488 1488 565 1 GLSVDSAQEVKR SVSSSIKRGLSVDSAQ DSAQEVKRFRTATGAI R G L K R F 1 1 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 12 1 1287.6783 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1771 1782 TRRAP Transformation/transcription domain-associated protein yes no 2 0.003721 78.287 By matching By MS/MS 1 1 5249200 3162500 2086700 765 480 819 1804;1805 1489 1489 565 1 GLTSLYGLILNNNK EIKENDFKGLTSLYGL GLILNNNKLTKIHPKA K G L N K L 0 0 3 0 0 0 0 2 0 1 4 1 0 0 0 1 1 0 1 0 0 0 14 0 1518.8406 Q9BXN1;Q5TBF2 Q9BXN1 124 137 ASPN Asporin yes no 2 4.851E-13 119.68 By MS/MS By matching 1 1 2478200 1703100 775080 766 1377 820 1806;1807 1490 1490 1 GLVAAYSGDSDNEEELVER DEENPLKRGLVAAYSG NEEELVERLESEEEKL R G L E R L 2 1 1 2 0 0 4 2 0 0 2 0 0 0 0 2 0 0 1 2 0 0 19 0 2051.9284 P52756 P52756 615 633 RBM5 RNA-binding protein 5 yes yes 2 0.0022555 71.558 By MS/MS By matching 1 1 4268000 1987700 2280300 767 1000 821 1808;1809 1491 1491 1146 1 GLYDGPVCEVSVTPK AELRGVPRGLYDGPVC CEVSVTPKTVTPASSA R G L P K T 0 0 0 1 1 0 1 2 0 0 1 1 0 0 2 1 1 0 1 3 0 0 15 0 1619.7865 A0A1C7CYX9;Q16555 A0A1C7CYX9 602 616 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 0.0064518 61.265 By MS/MS By matching 1 1 4052500 2383200 1669300 768 221 822 1810;1811 1492 1492 1938 1 GNAEGSSDEEGKLVIDEPAK AEGDGDKKGNAEGSSD LVIDEPAKEKNEKGAL K G N A K E 2 0 1 2 0 0 4 3 0 1 1 2 0 0 1 2 0 0 0 1 0 0 20 1 2043.9597 P51858 P51858 127 146 HDGF Hepatoma-derived growth factor yes yes 2 0.0087178 52.265 By MS/MS By matching 1 1 1281600 722080 559540 769 995 823 1812;1813 1493 1493 1142;1143 1 GNAEGSSDEEGKLVIDEPAKEK AEGDGDKKGNAEGSSD IDEPAKEKNEKGALKR K G N E K N 2 0 1 2 0 0 5 3 0 1 1 3 0 0 1 2 0 0 0 1 0 0 22 2 2301.0972 P51858 P51858 127 148 HDGF Hepatoma-derived growth factor yes yes 3 0.001196 69.581 By MS/MS By MS/MS 1 1 40184000 22392000 17793000 770 995 824 1814;1815 1494;1495 1495 1142;1143 2 GNDPLTSSPGR SSPAQRRRGNDPLTSS PLTSSPGRSSRRTDAL R G N G R S 0 1 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 11 0 1099.5258 P49736;C9J013;C9JZ21;F8WDM3 P49736 20 30 MCM2 DNA replication licensing factor MCM2 yes no 2 4.3373E-85 179.83 By MS/MS By MS/MS 1 1 40910000 22486000 18424000 771 978 825 1816;1817 1496;1497;1498;1499;1500 1497 1119 5 GNIETTSEDGQVFSPK EDDVGIERGNIETTSE DGQVFSPKKGQKKKSI R G N P K K 0 0 1 1 0 1 2 2 0 1 0 1 0 1 1 2 2 0 0 1 0 0 16 0 1707.7952 Q5T200 Q5T200 980 995 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 0.0016471 60.307 By MS/MS By matching 1 1 5712700 3445700 2266900 772 1167 826 1818;1819 1501;1502 1501 1363 2 GNSRPGTPSAEGGSTSSTLR KPSGGSSRGNSRPGTP GSTSSTLRAAASKLEQ R G N L R A 1 2 1 0 0 0 1 4 0 0 1 0 0 0 2 5 3 0 0 0 0 0 20 1 1917.914 M0QXD6;P35269 M0QXD6 299 318 GTF2F1 General transcription factor IIF subunit 1 yes no 3 0.0062531 51.688 By MS/MS By matching 1 1 3638400 2274400 1364100 773 741 827 1820;1821 1503 1503 2070 1 GNVVPSPLPTR ERSPSPLRGNVVPSPL VPSPLPTRRTRTFSAT R G N T R R 0 1 1 0 0 0 0 1 0 0 1 0 0 0 3 1 1 0 0 2 0 0 11 0 1135.635 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 36 46 CARHSP1 Calcium-regulated heat stable protein 1 yes no 2 0.011226 55.899 By MS/MS By MS/MS 1 1 4912400 2517300 2395100 774 645 828 1822;1823 1504;1505 1504 758 2 GPAGEAGASPPVR PSPPAPPRGPAGEAGA AGASPPVRRVRVVKQE R G P V R R 3 1 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 13 0 1164.5887 A0A140TA73;Q13425 A0A140TA73 102 114 SNTB2 Beta-2-syntrophin yes no 2 1.5701E-09 120.6 By MS/MS By MS/MS 1 1 3365400 2156300 1209100 775 208 829 1824;1825 1506;1507;1508;1509 1506 259 4 GPAYGLSR ________________ GPAYGLSREVQQKIEK R G P S R E 1 1 0 0 0 0 0 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 8 0 819.4239 X6RJP6;P37802 X6RJP6 5 12 TAGLN2 Transgelin-2 yes no 2 0.018853 83.753 By MS/MS By matching 1 1 1392200 668650 723600 776 953 830 1826;1827 1510 1510 2409 1 GPGEPDSPTPLHPPTPPILSTDR IIPAPKPKGPGEPDSP PPILSTDRSREDSPEL K G P D R S 0 1 0 2 0 0 1 2 1 1 2 0 0 0 8 2 3 0 0 0 0 0 23 0 2377.1914 Q03164 Q03164 1831 1853 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 0.00035772 56.9 By MS/MS 1 633120 633120 0 777 1048 831 1828 1511 1511 1197 1 GPHHLDNSSPGPGSEAR GLSSLPPRGPHHLDNS PGPGSEARGINGGPSR R G P A R G 1 1 1 1 0 0 1 3 2 0 1 0 0 0 3 3 0 0 0 0 0 0 17 0 1713.7819 H3BUF6;Q8WWM7 H3BUF6 383 399 ATXN2L Ataxin-2-like protein yes no 3 0.0013712 58.564 By MS/MS 1 648270 0 648270 778 667 832 1829 1512 1512 785;786 1 GPPASSPAPAPK SLANTQPRGPPASSPA SSPAPAPKFSPVTPKF R G P P K F 3 0 0 0 0 0 0 1 0 0 0 1 0 0 5 2 0 0 0 0 0 0 12 0 1075.5662 H7C3D3;H0Y2Y8;Q15942 H7C3D3 71 82 ZYX Zyxin yes no 2 0.0077776 57.802 By MS/MS By MS/MS 1 2 1240100 522890 717240 779 579 833 1830;1831;1832 1513;1514;1515 1513 694;695 3 GPPDFSSDEEREPTPVLGSGAAAAGR LPAGTNSKGPPDFSSD SGAAAAGRSRAAVGRK K G P G R S 4 2 0 2 0 0 3 4 0 0 1 0 0 1 4 3 1 0 0 1 0 0 26 1 2569.2045 G5E972;P42167;P42166 G5E972 61 86 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 3 8.3335E-14 87.793 By MS/MS By MS/MS 3 3 50740000 29822000 20918000 780 572;960 834;835 1833;1834;1835;1836;1837;1838 1516;1517;1518;1519;1520;1521;1522;1523;1524;1525;1526;1527 1516 674;675;2030 12 GPPQSPVFEGVYNNSR ARGQSTGKGPPQSPVF EGVYNNSRMLHFLTAV K G P S R M 0 1 2 0 0 1 1 2 0 0 0 0 0 1 3 2 0 0 1 2 0 0 16 0 1746.8325 H3BUF6;Q8WWM7;H3BSK9 H3BUF6 107 122 ATXN2L Ataxin-2-like protein yes no 2 0.0013422 63.709 By MS/MS By MS/MS 1 1 3200300 1561600 1638700 781 667 836 1839;1840 1528;1529 1528 787 2 GPPSPPAPVMHSPSR KINKKIPRGPPSPPAP PVMHSPSRKMTVKEQQ R G P S R K 1 1 0 0 0 0 0 1 1 0 0 0 1 0 6 3 0 0 0 1 0 0 15 0 1512.7507 G3V4X8;G3V3A4;Q13573 G3V4X8 59 73 SNW1 SNW domain-containing protein 1 yes no 2;3 0.00095779 68.49 By MS/MS By MS/MS 3 3 5008600 1833500 3175100 782 556 837;838 1841;1842;1843;1844;1845;1846 1530;1531;1532;1533;1534;1535 1534 92 653;654;655 6 GPPSPPAPVMHSPSRK KINKKIPRGPPSPPAP VMHSPSRKMTVKEQQE R G P R K M 1 1 0 0 0 0 0 1 1 0 0 1 1 0 6 3 0 0 0 1 0 0 16 1 1640.8457 G3V4X8;G3V3A4;Q13573 G3V4X8 59 74 SNW1 SNW domain-containing protein 1 yes no 3 0.00067874 62.287 By MS/MS By MS/MS 2 2 11021000 5818200 5202900 783 556 839;840 1847;1848;1849;1850 1536;1537;1538;1539;1540;1541 1538 92 653;654;655 6 GPQPPTVSPIR QKQNDTPKGPQPPTVS PPTVSPIRSSRPPPAK K G P I R S 0 1 0 0 0 1 0 1 0 1 0 0 0 0 4 1 1 0 0 1 0 0 11 0 1147.635 P46087 P46087 779 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0.00065183 94.538 By MS/MS By MS/MS 1 1 10872000 5849500 5022900 784 965 841 1851;1852 1542;1543;1544 1544 1092 3 GPSSVEDIK EKTPKTPKGPSSVEDI PSSVEDIKAKMQASIE K G P I K A 0 0 0 1 0 0 1 1 0 1 0 1 0 0 1 2 0 0 0 1 0 0 9 0 930.46583 P06748 P06748 240 248 NPM1 Nucleophosmin yes yes 2 0.00063724 97.597 By MS/MS By MS/MS 1 1 1985800 1076600 909230 785 861 842 1853;1854 1545;1546 1545 988 2 GPTSTSIDNIDGTPVRDER SHPSDFQRGPTSTSID GTPVRDERSGTPTQDE R G P E R S 0 2 1 3 0 0 1 2 0 2 0 0 0 0 2 2 3 0 0 1 0 0 19 1 2028.9712 Q5VT52 Q5VT52 711 729 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.0034021 66.826 By MS/MS By MS/MS 1 1 8806000 5379000 3427000 786 1176 843 1855;1856 1547;1548 1548 2179 2 GPVSGTEPEPVYSMEAADYR FKAELSYRGPVSGTEP SMEAADYREASSQQGL R G P Y R E 2 1 0 1 0 0 3 2 0 0 0 0 1 0 3 2 1 0 2 2 0 0 20 0 2153.9575 Q14247;H0YEV2;H0YCD9 Q14247 435 454 CTTN Src substrate cortactin yes no 2;3 0.0008854 65.808 By MS/MS By MS/MS 3 3 16868000 8177600 8690300 787 1098 844;845;846 1857;1858;1859;1860;1861;1862 1549;1550;1551;1552;1553;1554 1549 200 1271;2450;2451 6 GQTPLTEGSEDLDGHSDPEESFAR NGTFNLSRGQTPLTEG DPEESFARDLPDFPSI R G Q A R D 1 1 0 3 0 1 4 3 1 0 2 0 0 1 2 3 2 0 0 0 0 0 24 0 2573.1154 K7EQI9;Q86VR2 K7EQI9 208 231 FAM134C Protein FAM134C yes no 3 0.0084374 42.791 By MS/MS By matching 1 1 2046300 1918300 127970 788 737 847 1863;1864 1555 1555 857 1 GRAEGEWEDQEALDYFSDKESGK SKEKGSEKGRAEGEWE FSDKESGKQKFNDSEG K G R G K Q 2 1 0 3 0 1 5 3 0 0 1 2 0 1 0 2 0 1 1 0 0 0 23 2 2645.1518 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 367 389 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0012264 57.097 By MS/MS By matching 1 1 5873100 4127800 1745400 789 457 848 1865;1866 1556 1556 534 1 GRASSHSSQTQGGGSVTK SPTSQRSRGRASSHSS QGGGSVTKKRKLESTE R G R T K K 1 1 0 0 0 2 0 4 1 0 0 1 0 0 0 5 2 0 0 1 0 0 18 1 1730.8296 A0A0C4DGC5;Q3BDU5;Q5TCI8;P02545 A0A0C4DGC5 26 43 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0038629 54.073 By MS/MS By MS/MS 1 1 1651000 384680 1266300 790 153 849 1867;1868 1557;1558 1558 191;192;193;194 2 GRLGSVDSFER SRGANRMRGRLGSVDS GSVDSFERSNSLASEK R G R E R S 0 2 0 1 0 0 1 2 0 0 1 0 0 1 0 2 0 0 0 1 0 0 11 1 1221.6102 O60343;Q5JU47 O60343 584 594 TBC1D4 TBC1 domain family member 4 yes no 2;3 0.0015777 78.486 By MS/MS By MS/MS 2 2 11403000 5805100 5598400 791 789 850 1869;1870;1871;1872 1559;1560 1559 924 2 GRNSATSADEQPHIGNYR ________________ QPHIGNYRLLKTIGKG R G R Y R L 2 2 2 1 0 1 1 2 1 1 0 0 0 0 1 2 1 0 1 0 0 0 18 1 1971.9147 E7ETY4;E9PC69;Q7KZI7;F5H4J8;F5H6N2;F5H4F6 E7ETY4 4 21 MARK2 Serine/threonine-protein kinase MARK2 yes no 3 0.0026665 56.404 By MS/MS By MS/MS 1 1 7895900 4679100 3216800 792 423 851 1873;1874 1561;1562 1562 489 2 GRPSKTPSPSQPK QSTPQKGRGRPSKTPS TPSPSQPKKNVRVGRS R G R P K K 0 1 0 0 0 1 0 1 0 0 0 2 0 0 4 3 1 0 0 0 0 0 13 2 1365.7365 Q9NTI5 Q9NTI5 1376 1388 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 2 0.0036251 78.191 By MS/MS By matching 1 1 3984600 2246700 1737900 793 1427 852 1875;1876 1563 1563 1732;2225 1 GRTSSTNEDEDLNPEQKIER KDIKVSSRGRTSSTNE NPEQKIEREKERRMAN R G R E R E 0 2 2 2 0 1 4 1 0 1 1 1 0 0 1 2 2 0 0 0 0 0 20 2 2317.0782 B4DGI9;Q99081;B4DZP2;F5GY10 B4DGI9 575 594 TCF12 Transcription factor 12 yes no 3 0.0084186 53.444 By MS/MS 1 539550 539550 0 794 263 853 1877 1564 1564 332 1 GSDDAPYSPTAR KSRSKKRKGSDDAPYS APYSPTARVGPSVPRQ K G S A R V 2 1 0 2 0 0 0 1 0 0 0 0 0 0 2 2 1 0 1 0 0 0 12 0 1235.5418 E7ET14;A0A087WW48;O75151 E7ET14 111 122 PHF2 Lysine-specific demethylase PHF2 yes no 2 7.7718E-06 102.9 By matching By MS/MS 1 1 1288800 754420 534340 795 41 854 1878;1879 1565 1565 49 1 GSDFDCELR CLNYQHYKGSDFDCEL SDFDCELRLLIHQSLA K G S L R L 0 1 0 2 1 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1097.4448 P61978;Q5T6W2 P61978 140 148 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0023011 91.069 By matching By MS/MS 1 1 1773900 1165000 608820 796 1018 855 1880;1881 1566 1566 1 GSEKEEYFI QMESDLAKGSEKEEYF SEKEEYFI________ K G S F I - 0 0 0 0 0 0 3 1 0 1 0 1 0 1 0 1 0 0 1 0 0 0 9 1 1100.5026 S4R466;Q0VAQ4 S4R466 75 83 SMAGP Small cell adhesion glycoprotein yes no 2 0.018024 63.565 By MS/MS By matching 1 1 3027400 1526100 1501300 797 1064 856 1882;1883 1567 1567 2445 1 GSESPNSFLDQESR KQPLPGPKGSESPNSF SFLDQESRRRRFTIAD K G S S R R 0 1 1 1 0 1 2 1 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1551.6801 Q5T4Y8;C9IZX4;Q6P9H4 Q5T4Y8 142 155 CNKSR3 Connector enhancer of kinase suppressor of ras 3 yes no 2 0.012319 49.482 By matching By MS/MS 1 1 796130 391460 404660 798 308 857 1884;1885 1568 1568 369 1 GSETPGATPGSK DETPGRAKGSETPGAT PGATPGSKIWDPTPSH K G S S K I 1 0 0 0 0 0 1 3 0 0 0 1 0 0 2 2 2 0 0 0 0 0 12 0 1087.5146 O75533 O75533 241 252 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.018715 69.352 By matching By MS/MS 1 1 2084400 1017700 1066700 799 799 858 1886;1887 1569 1569 1 GSFSDTGLGDGK DKEKIKEKGSFSDTGL DTGLGDGKMKSDSFAP K G S G K M 0 0 0 2 0 0 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 12 0 1139.5095 Q9Y2W1 Q9Y2W1 376 387 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0018462 78.529 By MS/MS By MS/MS 1 1 8357000 4796300 3560700 800 1501 859 1888;1889 1570;1571 1570 1839 2 GSFSSENYWR LLPTHRRRGSFSSENY FSSENYWRKSYESSED R G S W R K 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 3 0 1 1 0 0 0 10 0 1231.5258 K7ER58;Q6P6C2 K7ER58 19 28 ALKBH5 RNA demethylase ALKBH5 yes no 2 0.010559 62.546 By matching By MS/MS 1 1 1220300 663370 556930 801 738 860 1890;1891 1572 1572 858 1 GSGHSQEQPAPQPSGGDPSPPQER ESIGARSRGSGHSQEQ DPSPPQERNLPEGTER R G S E R N 1 1 0 1 0 4 2 4 1 0 0 0 0 0 6 4 0 0 0 0 0 0 24 0 2426.0847 Q8WXE0 Q8WXE0 707 730 CASKIN2 Caskin-2 yes yes 3 0.0055842 40.012 By MS/MS 1 284910 0 284910 802 1294 861 1892 1573 1573 1528 1 GSGTASDDEFENLR RIALPAPRGSGTASDD DDEFENLRIKGPNAVQ R G S L R I 1 1 1 2 0 0 2 2 0 0 1 0 0 1 0 2 1 0 0 0 0 0 14 0 1496.6379 Q7Z6Z7 Q7Z6Z7 1902 1915 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0088841 70.942 By matching By MS/MS 1 1 70231000 37392000 32839000 803 1226 862 1893;1894 1574 1574 2186 1 GSISTPNSPVK MRVSVSSKGSISTPNS STPNSPVKMTLIPSPN K G S V K M 0 0 1 0 0 0 0 1 0 1 0 1 0 0 2 3 1 0 0 1 0 0 11 0 1085.5717 A0A087WW06;Q96AY4 A0A087WW06 1974 1984 TTC28 Tetratricopeptide repeat protein 28 yes no 2 0.0054159 64.654 By MS/MS 1 433090 433090 0 804 39 863 1895 1575 1575 47;48 1 GSLASLDSLR APLAQHERGSLASLDS LASLDSLRKGGPPPPN R G S L R K 1 1 0 1 0 0 0 1 0 0 3 0 0 0 0 3 0 0 0 0 0 0 10 0 1017.5455 C9JZR2;O60716;E9PKY0 C9JZR2 345 354 CTNND1 Catenin delta-1 yes no 2 0.00405 69.451 By matching By MS/MS 1 1 3206100 1898300 1307800 805 348 864 1896;1897 1576 1576 413 1 GSLGGGFSSGGFSGGSFSR SLRISSSKGSLGGGFS FSGGSFSRGSSGGGCF K G S S R G 0 1 0 0 0 0 0 8 0 0 1 0 0 3 0 6 0 0 0 0 0 0 19 0 1706.7649 CON__P13645;P13645 CON__P13645 41 59 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.0047771 59.75 By MS/MS 1 1313500 1313500 0 + 806 356 865 1898 1577 1577 1 GSLSTDKDTAYGSFQNGHGIK GFTSPANRGSLSTDKD FQNGHGIKREDSRGSL R G S I K R 1 0 1 2 0 1 0 4 1 1 1 2 0 1 0 3 2 0 1 0 0 0 21 1 2182.0291 A0A0J9YW64;A6NIW2;Q5JSL3 A0A0J9YW64 1042 1062 DOCK11 Dedicator of cytokinesis protein 11 yes no 3 0.0027288 65.924 By MS/MS By matching 1 1 2306400 1624200 682210 807 187 866 1899;1900 1578 1578 2280 1 GSPDGSLQTGKPSAPK ALKLRSPRGSPDGSLQ TGKPSAPKKLKLDVGE R G S P K K 1 0 0 1 0 1 0 3 0 0 1 2 0 0 3 3 1 0 0 0 0 0 16 1 1525.7736 E7EV54;C9JFV4;Q8IZL8 E7EV54 333 348 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 2 0.0025283 72.315 By MS/MS By MS/MS 1 1 36939000 19787000 17152000 808 330 867 1901;1902 1579;1580 1579 393 2 GSPEEELPLPAFEK CHSLGTARGSPEEELP LPLPAFEKLNPYPTPS R G S E K L 1 0 0 0 0 0 4 1 0 0 2 1 0 1 3 1 0 0 0 0 0 0 14 0 1541.7613 Q5JTD0 Q5JTD0 299 312 TJAP1 Tight junction-associated protein 1 yes yes 2 0.0095353 51.546 By matching By MS/MS 1 1 1037500 500390 537120 809 1159 868 1903;1904 1581 1581 1352 1 GSPGSVGYPGSPGLPGEKGDK MPGSPGLKGSPGSVGY LPGEKGDKGLPGLDGI K G S D K G 0 0 0 1 0 0 1 7 0 0 1 2 0 0 4 3 0 0 1 1 0 0 21 1 1941.9432 P02462 P02462 1100 1120 COL4A1 Collagen alpha-1(IV) chain;Arresten yes yes 3 0.019673 34.649 By matching By MS/MS 1 1 1291500 398840 892690 810 842 869 1905;1906 1582 1582 1 GSPSSHLLGADHGLR GGAALGGRGSPSSHLL LGADHGLRKAKKPKKK R G S L R K 1 1 0 1 0 0 0 3 2 0 3 0 0 0 1 3 0 0 0 0 0 0 15 0 1502.759 F8VU11;Q6NWY9 F8VU11 784 798 PRPF40B Pre-mRNA-processing factor 40 homolog B yes no 3 0.0056963 49.149 By MS/MS By matching 1 1 1193800 719740 474030 811 515 870 1907;1908 1583 1583 605 1 GSPTGGAQLLK GSHPQGPRGSPTGGAQ TGGAQLLKRKRKLGVV R G S L K R 1 0 0 0 0 1 0 3 0 0 2 1 0 0 1 1 1 0 0 0 0 0 11 0 1027.5662 Q14684 Q14684 512 522 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.00011554 101.35 By MS/MS By MS/MS 1 1 4028200 2363100 1665100 812 1106 871 1909;1910 1584;1585 1585 1283 2 GSSLSGTDDGAQEVVK NGDAPRERGSSLSGTD DGAQEVVKDILEDVVT R G S V K D 1 0 0 2 0 1 1 3 0 0 1 1 0 0 0 3 1 0 0 2 0 0 16 0 1548.7267 Q9Y6D5 Q9Y6D5 275 290 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.0037349 55.04 By matching By MS/MS 1 1 1659200 644290 1014900 813 1518 872 1911;1912 1586 1586 1863 1 GSSPGPRPVEGTPASR KTKSQTHRGSSPGPRP VEGTPASRTQDPSSPG R G S S R T 1 2 0 0 0 0 1 3 0 0 0 0 0 0 4 3 1 0 0 1 0 0 16 1 1550.7801 Q13112 Q13112 408 423 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 0.0025486 60.918 By MS/MS By matching 1 1 22701000 13653000 9047900 814 1077 873 1913;1914 1587 1587 1236 1 GSSPTPPCSPVQPSK TAEAIGLKGSSPTPPC CSPVQPSKQLEYLARI K G S S K Q 0 0 0 0 1 1 0 1 0 0 0 1 0 0 5 4 1 0 0 1 0 0 15 0 1524.7242 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3 H0YBY0 97 111 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 2 0.0049407 54.09 By MS/MS By matching 1 1 1628600 955550 673100 815 129 874 1915;1916 1588 1588 161 1 GSVSDEEMMELR ________________ DEEMMELREAFAKVDT R G S L R E 0 1 0 1 0 0 3 1 0 0 1 0 2 0 0 2 0 0 0 1 0 0 12 0 1381.5854 P13796;Q5TBN5;Q5TBN3 P13796 4 15 LCP1 Plastin-2 yes no 2 0.0061217 62.088 By MS/MS By MS/MS 1 1 2109400 587870 1521500 816 898 875 1917;1918 1589;1590;1591 1589 1020 3 GSYGSDAEEEEYR SRPYQDTRGSYGSDAE DAEEEEYRQQLSEHSK R G S Y R Q 1 1 0 1 0 0 4 2 0 0 0 0 0 0 0 2 0 0 2 0 0 0 13 0 1490.5797 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1214 1226 TJP2 Tight junction protein ZO-2 yes no 2 0.0043828 62.68 By MS/MS By MS/MS 1 1 1687700 951970 735730 817 211 876 1919;1920 1592;1593 1592 265 2 GTDTQTPAVLSPSK LRQNAPPKGTDTQTPA PAVLSPSKTQATLKPK K G T S K T 1 0 0 1 0 1 0 1 0 0 1 1 0 0 2 2 3 0 0 1 0 0 14 0 1400.7147 P46087 P46087 722 735 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0 225.31 By MS/MS By MS/MS 1 1 12219000 6293600 5925300 818 965 877 1921;1922 1594;1595 1595 1093 2 GTDTQTPAVLSPSKTQATLKPK LRQNAPPKGTDTQTPA TQATLKPKDHHQPLGR K G T P K D 2 0 0 1 0 2 0 1 0 0 2 3 0 0 3 2 5 0 0 1 0 0 22 2 2268.2325 P46087 P46087 722 743 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 3 1.2305E-28 108.96 By MS/MS By matching 1 1 8577900 5821100 2756800 819 965 878 1923;1924 1596 1596 1093 1 GTGQSDDSDIWDDTALIK EDSVLFRRGTGQSDDS WDDTALIKAYDKAVAS R G T I K A 1 0 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 18 0 1935.8698 B4DP61;E7EQZ4;Q16637 B4DP61 24 41 SMN2;SMN1 Survival motor neuron protein yes no 2 0.0024365 60.157 By matching By MS/MS 1 1 10736000 5945800 4790000 820 267 879 1925;1926 1597 1597 334 1 GTHVDLGLASANVDFAFSLYK LTQENQDRGTHVDLGL DFAFSLYKQLVLKAPD R G T Y K Q 3 0 1 2 0 0 0 2 1 0 3 1 0 2 0 2 1 0 1 2 0 0 21 0 2224.1164 G3V595;P01011 G3V595 42 62 SERPINA3 Alpha-1-antichymotrypsin;Alpha-1-antichymotrypsin His-Pro-less yes no 3 0.0039151 46.368 By MS/MS 1 1942600 0 1942600 821 564 880 1927 1598 1598 1 GTIEILSDVQLIK GITTKISRGTIEILSD LSDVQLIKTGDKV___ R G T I K T 0 0 0 1 0 1 1 1 0 3 2 1 0 0 0 1 1 0 0 1 0 0 13 0 1427.8235 F8VPE8;F8VW21;F8VU65;Q8NHW5;P05388 F8VPE8 136 148 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2 3.3561E-06 102.52 By MS/MS 1 917740 917740 0 822 510 881 1928 1599 1599 1 GTPSQSPVVGR APTLHLNKGTPSQSPV SQSPVVGRSQGQQQEK K G T G R S 0 1 0 0 0 1 0 2 0 0 0 0 0 0 2 2 1 0 0 2 0 0 11 0 1083.5673 C9J2I0;B8ZZY2;P52594 C9J2I0 98 108 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 2 0.0011885 84.352 By MS/MS 1 1191100 0 1191100 823 302 882 1929 1600;1601 1601 355 2 GTTITLVLKEEASDYLELDTIK PRGNTLGRGTTITLVL YLELDTIKNLVKKYSQ R G T I K N 1 0 0 2 0 0 3 1 0 2 4 2 0 0 0 1 4 0 1 1 0 0 22 1 2451.2996 P14625;Q96GW1 P14625 244 265 HSP90B1 Endoplasmin yes no 3 0.0091488 40.158 By MS/MS 1 1355300 0 1355300 824 900 883 1930 1602 1602 1 GTYGILSK SYSSASTRGTYGILSK GTYGILSKTVGTQDTP R G T S K T 0 0 0 0 0 0 0 2 0 1 1 1 0 0 0 1 1 0 1 0 0 0 8 0 837.45962 Q08378 Q08378 327 334 GOLGA3 Golgin subfamily A member 3 yes yes 2 0.015545 95.909 By matching By MS/MS 1 1 1142900 677740 465170 825 1059 884 1931;1932 1603 1603 2444 1 GVAIGQTSLTASVTNK YTITFLIRGVAIGQTS LTASVTNKAGQRINSA R G V N K A 2 0 1 0 0 1 0 2 0 1 1 1 0 0 0 2 3 0 0 2 0 0 16 0 1545.8362 Q8TEM1 Q8TEM1 1048 1063 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.017059 46.964 By MS/MS 1 0 0 0 826 1286 885 1933 1604 1604 1 GVDEVTIVNILTNR IETAIKTKGVDEVTIV IVNILTNRSNAQRQDI K G V N R S 0 1 2 1 0 0 1 1 0 2 1 0 0 0 0 0 2 0 0 3 0 0 14 0 1541.8413 H0YMD0;H0YMU9;H0YN42;P07355;H0YMM1;H0YKS4;H0YMD9;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4 H0YMD0 50 63 ANXA2 Annexin;Annexin A2 yes no 2;3 4.0471E-20 169.89 By MS/MS By MS/MS 1 2 9489600 4675100 4814500 827 628 886 1934;1935;1936 1605;1606;1607 1605 3 GVEEEEEDGEMRE CNNVLYIRGVEEEEED EEDGEMRE________ R G V R E - 0 1 0 1 0 0 7 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 13 1 1536.5886 P62306 P62306 74 86 SNRPF Small nuclear ribonucleoprotein F yes yes 2 0.0024681 70.412 By MS/MS By MS/MS 2 1 2290500 1401000 889480 828 1023 887;888 1937;1938;1939 1608;1609;1610 1610 185 3 GVLDLDRPGEPAGEESPGPLQER RMKTPTVRGVLDLDRP SPGPLQERSPLLPLPE R G V E R S 1 2 0 2 0 1 4 4 0 0 3 0 0 0 4 1 0 0 0 1 0 0 23 1 2417.1823 Q9UMN6 Q9UMN6 2333 2355 KMT2B Histone-lysine N-methyltransferase 2B yes yes 3 0.0036197 49.592 By matching By MS/MS 1 1 1555700 835400 720270 829 1477 889 1940;1941 1611 1611 1787 1 GVLHTFSPSPK RGSATTPRGVLHTFSP HTFSPSPKLQNSASAT R G V P K L 0 0 0 0 0 0 0 1 1 0 1 1 0 1 2 2 1 0 0 1 0 0 11 0 1168.6241 Q86YP4 Q86YP4 540 550 GATAD2A Transcriptional repressor p66-alpha yes yes 2 0.0027469 72.531 By MS/MS By matching 1 1 1065500 570750 494710 830 1237 890 1942;1943 1612 1612 1457 1 GVPAGNSDTEGGQPGR ISVVSATKGVPAGNSD TEGGQPGRKRRWGAST K G V G R K 1 1 1 1 0 1 1 5 0 0 0 0 0 0 2 1 1 0 0 1 0 0 16 0 1497.6808 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;G3V3T3 S4R3H4 774 789 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0013939 64.588 By MS/MS By MS/MS 1 1 3548500 1800500 1748000 831 412 891 1944;1945 1613;1614;1615 1614 467 3 GVPQIEVTFEIDVNGILR TGIPPAPRGVPQIEVT IDVNGILRVTAEDKGT R G V L R V 0 1 1 1 0 1 2 2 0 3 1 0 0 1 1 0 1 0 0 3 0 0 18 0 1998.0786 P11021 P11021 493 510 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0015966 77.185 By MS/MS 1 3919600 0 3919600 832 884 892 1946 1616 1616 1 GVSMPNMLEPK MPAMRMDRGVSMPNML MPNMLEPKIFPYEMLM R G V P K I 0 0 1 0 0 0 1 1 0 0 1 1 2 0 2 1 0 0 0 1 0 0 11 0 1201.5835 J3QSX6;F8W8M4;A0A0A0MRL6;O14639 J3QSX6 327 337 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.0084093 62.088 By MS/MS By matching 1 1 890540 456400 434150 833 104 893 1947;1948 1617 1617 16 127 1 GVTIKPTVDDD IGWGQIRRGVTIKPTV IKPTVDDD________ R G V D D - 0 0 0 3 0 0 0 1 0 1 0 1 0 0 1 0 2 0 0 2 0 0 11 1 1158.5768 Q2VIR3;P41091 Q2VIR3 462 472 EIF2S3L;EIF2S3 Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 yes no 2 0.0026477 74.165 By MS/MS By matching 1 1 923890 477620 446270 834 958 894 1949;1950 1618 1618 1 GVVDSDDLPLNVSR PKYLNFVKGVVDSDDL DLPLNVSRETLQQHKL K G V S R E 0 1 1 3 0 0 0 1 0 0 2 0 0 0 1 2 0 0 0 3 0 0 14 0 1484.7471 P14625 P14625 435 448 HSP90B1 Endoplasmin yes yes 2 0.00019594 81.525 By MS/MS By matching 1 1 1618800 1047700 571130 835 900 895 1951;1952 1619 1619 1 GVVDSEDLPLNISR PEYLNFIRGVVDSEDL DLPLNISREMLQQSKI R G V S R E 0 1 1 2 0 0 1 1 0 1 2 0 0 0 1 2 0 0 0 2 0 0 14 0 1512.7784 P08238;P07900 P08238 379 392 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha no no 2 1.4173E-15 132.03 By MS/MS By MS/MS 1 1 2928900 1879700 1049200 836 871;868 896 1953;1954 1620;1621 1620 2 GWGDQLIWTQTYEEALYK KLPQTLSRGWGDQLIW TYEEALYKSKTSNKPL R G W Y K S 1 0 0 1 0 2 2 2 0 1 2 1 0 0 0 0 2 2 2 0 0 0 18 0 2200.0477 C9J3E2;B5MC07;O95994 C9J3E2 47 64 AGR2 Anterior gradient protein 2 homolog yes no 2 2.0518E-45 145.81 By matching By MS/MS 1 1 22989000 17270000 5719600 837 275 897 1955;1956 1622 1622 1 GYAFIEFASFEDAK QNQNGKSKGYAFIEFA FASFEDAKEALNSCNK K G Y A K E 3 0 0 1 0 0 2 1 0 1 0 1 0 3 0 1 0 0 1 0 0 0 14 0 1593.7351 P19338;H7BY16 P19338 524 537 NCL Nucleolin yes no 2 0.00012688 97.734 By MS/MS By matching 1 1 6422600 3557600 2865000 838 914 898 1957;1958 1623 1623 1 GYDVIAQAQSGTGK RAIIPCIKGYDVIAQA QAQSGTGKTATFAISI K G Y G K T 2 0 0 1 0 2 0 3 0 1 0 1 0 0 0 1 1 0 1 1 0 0 14 0 1393.6838 E7EQG2;P60842;Q14240;J3KT04;J3KS93;E7EMV8;J3KSN7;J3QKZ9;J3QLN6;J3KS25;J3QR64;J3KTB5;J3QL43;J3QS69;J3KT12 E7EQG2 70 83 EIF4A2;EIF4A1 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.0093097 55.98 By MS/MS By matching 1 1 825140 501060 324080 839 409 899 1959;1960 1624 1624 1 GYEEWLLNEIR GCLEQVEKGYEEWLLN EWLLNEIRRLERLDHL K G Y I R R 0 1 1 0 0 0 3 1 0 1 2 0 0 0 0 0 0 1 1 0 0 0 11 0 1420.6987 P12814;H9KV75;P35609;O43707;F6THM6 P12814 377 387 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 yes no 2 0.0025006 82.749 By MS/MS 1 812300 0 812300 840 895 900 1961 1625 1625 1 GYMMMFPR RSPFEDSRGYMMMFPR GYMMMFPRVSPPPAPS R G Y P R V 0 1 0 0 0 0 0 1 0 0 0 0 3 1 1 0 0 0 1 0 0 0 8 0 1031.4391 O14654 O14654 742 749 IRS4 Insulin receptor substrate 4 yes yes 2 0.012577 52.683 By MS/MS 1 257050 257050 0 841 761 901 1962 1626 1626 118 2378 1 GYNDDYYEESYFTTR DALLYQSKGYNDDYYE EESYFTTRTYGEPESA K G Y T R T 0 1 1 2 0 0 2 1 0 0 0 0 0 1 0 1 2 0 4 0 0 0 15 0 1921.7643 Q5HY57;P50402 Q5HY57 54 68 EMD Emerin yes no 2 0.0026575 67.022 By matching By MS/MS 1 2 2739900 1438700 1301200 842 987 902 1963;1964;1965 1627;1628 1628 2428;2429 2 GYPDSESTWEPR EYYLVKWRGYPDSEST SESTWEPRQNLKCVRI R G Y P R Q 0 1 0 1 0 0 2 1 0 0 0 0 0 0 2 2 1 1 1 0 0 0 12 0 1422.6052 O43463 O43463 66 77 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 yes yes 2 0.014551 50.909 By MS/MS By matching 1 1 700760 462010 238750 843 782 903 1966;1967 1629 1629 0 GYSDEIYVVPDDSQNR IDTIFKQKGYSDEIYV VPDDSQNRIKIRNSFV K G Y N R I 0 1 1 3 0 1 1 1 0 1 0 0 0 0 1 2 0 0 2 2 0 0 16 0 1855.8224 A0A0A0MSK6;Q13017 A0A0A0MSK6 1103 1118 ARHGAP5 Rho GTPase-activating protein 5 yes no 2 0.0017471 79.23 By MS/MS By MS/MS 1 1 9931400 5937700 3993700 844 120 904 1968;1969 1630;1631 1631 2268 2 GYSFTTTAER LMKILTERGYSFTTTA SFTTTAEREIVRDIKE R G Y E R E 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 1 3 0 1 0 0 0 10 0 1131.5197 P63261;P60709;I3L3I0;I3L1U9;I3L4N8 P63261 197 206 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2 0.00015934 99.442 By MS/MS By matching 1 1 5456100 4035500 1420600 845 1017 905 1970;1971 1632 1632 1 GYTSDSEVYTDHGRPGK QNDVSLDRGYTSDSEV TDHGRPGKIHRSATDA R G Y G K I 0 1 0 2 0 0 1 3 1 0 0 1 0 0 1 2 2 0 2 1 0 0 17 1 1867.8337 Q92538 Q92538 1315 1331 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 3 0.0048715 52.522 By matching By MS/MS 1 1 15640000 9342200 6297700 846 1300 906 1972;1973 1633;1634 1634 1535 2 GYVLGETSNLPSPGK LVIPFSGKGYVLGETS SNLPSPGKLITSHAIN K G Y G K L 0 0 1 0 0 0 1 3 0 0 2 1 0 0 2 2 1 0 1 1 0 0 15 0 1517.7726 B1AKT1;Q9H040 B1AKT1 153 167 SPRTN SprT-like domain-containing protein Spartan yes no 2 0.0025993 56.548 By matching By MS/MS 1 1 745610 425280 320330 847 251 907 1974;1975 1635 1635 323 1 GYYSPGIVSTR HTNYLLMRGYYSPGIV SPGIVSTRNLNPNDSI R G Y T R N 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 2 1 0 2 1 0 0 11 0 1198.5982 Q12789 Q12789 1650 1660 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.012908 55.04 By MS/MS By matching 1 1 1232900 497250 735670 848 1065 908 1976;1977 1636 1636 1 HALTSPSLGGQGR ________________ PSLGGQGRQNLWFANP R H A G R Q 1 1 0 0 0 1 0 3 1 0 2 0 0 0 1 2 1 0 0 0 0 0 13 0 1279.6633 M0QX45;M0QZ22;Q5PRF9 M0QX45 5 17 SAMD4B Protein Smaug homolog 2 yes no 2 0.0017392 87.216 By MS/MS By MS/MS 1 1 3683100 1942000 1741000 849 740 909 1978;1979 1637;1638 1637 859;2069 2 HAPHCLSEEEGEQDRPR PRPASLLRHAPHCLSE EGEQDRPRAPGPWDPL R H A P R A 1 2 0 1 1 1 4 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 17 1 2045.8973 E9PH18;A0A0J9YX62;O75190 E9PH18 156 172 DNAJB6 DnaJ homolog subfamily B member 6 yes no 3 0.001381 63.682 By MS/MS By matching 1 1 3457900 2394500 1063400 850 189 910 1980;1981 1639 1639 237 1 HASAPSHVQPSDSEK QKSQPRRRHASAPSHV VQPSDSEKNRTMLFQV R H A E K N 2 0 0 1 0 1 1 0 2 0 0 1 0 0 2 4 0 0 0 1 0 0 15 0 1575.7277 O60343 O60343 339 353 TBC1D4 TBC1 domain family member 4 yes yes 2;3 3.1748E-05 92.151 By MS/MS By MS/MS 2 2 10951000 7322400 3628800 851 789 911 1982;1983;1984;1985 1640;1641;1642;1643 1640 925;926 4 HASAPSHVQPSDSEKNR QKSQPRRRHASAPSHV PSDSEKNRTMLFQVGR R H A N R T 2 1 1 1 0 1 1 0 2 0 0 1 0 0 2 4 0 0 0 1 0 0 17 1 1845.8718 O60343 O60343 339 355 TBC1D4 TBC1 domain family member 4 yes yes 3;4 0.00053185 68.919 By MS/MS By MS/MS 2 2 15172000 7102300 8069600 852 789 912 1986;1987;1988;1989 1644;1645;1646;1647 1646 925;926 4 HASPDKWNDKPK VYYHITSKHASPDKWN DKWNDKPKNQLNKETD K H A P K N 1 0 1 2 0 0 0 0 1 0 0 3 0 0 2 1 0 1 0 0 0 0 12 2 1421.7052 Q96JM3;S4R3K0 Q96JM3 85 96 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes no 4 0.0049763 51.286 By MS/MS 1 456970 0 456970 853 1338 913 1990 1648 1648 1581 1 HAYKDDSPR KERRPHKKHAYKDDSP AYKDDSPRRRSTSPDH K H A P R R 1 1 0 2 0 0 0 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 9 1 1087.5047 Q02040 Q02040 627 635 AKAP17A A-kinase anchor protein 17A yes yes 2 0.0082837 73.885 By matching By MS/MS 1 1 1575700 529140 1046500 854 1042 914 1991;1992 1649 1649 1186 1 HDSIPAADTFEDLSDVEGGGSEPTQR EDLRRSVKHDSIPAAD GGSEPTQRDAGSRDEK K H D Q R D 2 1 0 4 0 1 3 3 1 1 1 0 0 1 2 3 2 0 0 1 0 0 26 0 2729.2053 O95671 O95671 226 251 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 3 0.00069027 51.234 By matching By MS/MS 1 1 5800400 3188600 2611800 855 823 915 1993;1994 1650 1650 973 1 HDSPEDVKR CMMAQYNRHDSPEDVK DSPEDVKRRAMADPEV R H D K R R 0 1 0 2 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 9 1 1081.5152 H0YGI8;P31948 H0YGI8 78 86 STIP1 Stress-induced-phosphoprotein 1 yes no 3 0.010351 73.435 By MS/MS 1 1676200 1676200 0 856 620 916 1995 1651 1651 742 1 HELSPPQKR RERFSPPRHELSPPQK ELSPPQKRMRRDWDEH R H E K R M 0 1 0 0 0 1 1 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1090.5883 Q9BXP5;C9JUL9 Q9BXP5 71 79 SRRT Serrate RNA effector molecule homolog yes no 2;3 0.00075699 99.568 By MS/MS By MS/MS 2 2 7091500 3474800 3616800 857 1378 917 1996;1997;1998;1999 1652;1653;1654 1653 1641 3 HFLENLVTAFDVGSEK RFNFRLVRHFLENLVT AFDVGSEKTRIGLAQY R H F E K T 1 0 1 1 0 0 2 1 1 0 2 1 0 2 0 1 1 0 0 2 0 0 16 0 1804.8996 Q05707;H0YBB2;Q4G0W3 Q05707 179 194 COL14A1 Collagen alpha-1(XIV) chain yes no 3 0.00056982 73.593 By MS/MS 1 1094700 1094700 0 858 1053 918 2000 1655 1655 1 HFNYPSTPPSER DMNQGTSRHFNYPSTP PSTPPSERNGTSSTCQ R H F E R N 0 1 1 0 0 0 1 0 1 0 0 0 0 1 3 2 1 0 1 0 0 0 12 0 1430.6579 J3QSE8;Q9BX63 J3QSE8 107 118 BRIP1 Fanconi anemia group J protein yes no 2 0.011848 54.023 By matching By MS/MS 1 1 1159300 712060 447200 859 720 919 2001;2002 1656 1656 843 1 HGAPAAPSPPPR PLVAPPRRHGAPAAPS AAPSPPPRGSRAGPVV R H G P R G 3 1 0 0 0 0 0 1 1 0 0 0 0 0 5 1 0 0 0 0 0 0 12 0 1153.5992 Q4KMP7 Q4KMP7 15 26 TBC1D10B TBC1 domain family member 10B yes yes 3 0.0048406 55.98 By matching By MS/MS 1 1 532290 249700 282590 860 1146 920 2003;2004 1657 1657 1333 1 HGESAWNLENR AYKLVLIRHGESAWNL SAWNLENRFSGWYDAD R H G N R F 1 1 2 0 0 0 2 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 11 0 1311.5956 P18669 P18669 11 21 PGAM1 Phosphoglycerate mutase 1 yes yes 2 1.1472E-20 151.3 By MS/MS By MS/MS 1 1 12410000 7196100 5213400 861 911 921 2005;2006 1658;1659 1659 1035 2 HGLAHDEMKSPR ISPSTFRKHGLAHDEM HDEMKSPREPGYKAEG K H G P R E 1 1 0 1 0 0 1 1 2 0 1 1 1 0 1 1 0 0 0 0 0 0 12 1 1376.6619 Q9Y2W1 Q9Y2W1 689 700 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.001767 73.415 By MS/MS By MS/MS 1 1 3308600 1776600 1532000 862 1501 922 2007;2008 1660;1661 1660 1840 2 HGLLLPASPVR NSTTFPSRHGLLLPAS LLPASPVRMHSSRLHQ R H G V R M 1 1 0 0 0 0 0 1 1 0 3 0 0 0 2 1 0 0 0 1 0 0 11 0 1158.6873 Q96E09 Q96E09 69 79 FAM122A Protein FAM122A yes yes 2 0.0054847 67.252 By MS/MS By MS/MS 1 1 7319200 4546600 2772600 863 1327 923 2009;2010 1662;1663 1663 1562 2 HGLQLGAQSPGR LEKHVQVRHGLQLGAQ LGAQSPGRGTTLARGS R H G G R G 1 1 0 0 0 2 0 3 1 0 2 0 0 0 1 1 0 0 0 0 0 0 12 0 1219.6422 Q8N1G0;A6PVV7 Q8N1G0 1049 1060 ZNF687 Zinc finger protein 687 yes no 2;3 0.00071203 92.151 By matching By MS/MS 2 2 7834900 4295500 3539400 864 1250 924 2011;2012;2013;2014 1664;1665 1664 1475 2 HGQKAEEPHR H G H R 1 1 0 0 0 1 2 1 2 0 0 1 0 0 1 0 0 0 0 0 0 0 10 1 1187.5796 REV__A2A3L6 yes yes 3 0.0075617 52.725 By matching By MS/MS 1 1 25349000 13590000 11759000 + 865 1526 925 2015;2016 1666;1667 1667 2 HGSFHEDEDPIGSPR TGGSPSVRHGSFHEDE EDPIGSPRLLSVKGSP R H G P R L 0 1 0 2 0 0 2 2 2 1 0 0 0 1 2 2 0 0 0 0 0 0 15 0 1678.7336 Q96T58 Q96T58 1266 1280 SPEN Msx2-interacting protein yes yes 3 0.00070162 72.187 By MS/MS By MS/MS 1 1 3827900 2007800 1820000 866 1353 926 2017;2018 1668;1669 1668 1608 2 HGSFVNKPTR LGGEEWTRHGSFVNKP SFVNKPTRGWLHPNDK R H G T R G 0 1 1 0 0 0 0 1 1 0 0 1 0 1 1 1 1 0 0 1 0 0 10 1 1141.5992 P29353;Q5T181;Q5T182 P29353 137 146 SHC1 SHC-transforming protein 1 yes no 3 0.0086687 62.528 By MS/MS By matching 1 1 1706900 937050 769900 867 938 927 2019;2020 1670 1670 1056 1 HGSVSADEAAR ________________ VSADEAARTAPFHLDL R H G A R T 3 1 0 1 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1098.5054 A0A1B0GU90;A0A1B0GW73;H3BNF1;A0A1B0GTV3;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;Q9NWW5 A0A1B0GU90 5 15 CLN6 Ceroid-lipofuscinosis neuronal protein 6 yes no 2 2.9282E-10 112.43 By MS/MS By matching 1 1 3469500 1909300 1560300 868 192 928 2021;2022 1671 1671 242 0 HHNSTAELQK SYSGDISRHHNSTAEL NSTAELQKAEAKKEET R H H Q K A 1 0 1 0 0 1 1 0 2 0 1 1 0 0 0 1 1 0 0 0 0 0 10 0 1163.5683 A0A0A0MS99;I3L4X2;P33527 A0A0A0MS99 611 620 ABCC1 Multidrug resistance-associated protein 1 yes no 3 0.0074919 56.122 By matching By MS/MS 1 1 918850 537050 381800 869 116 929 2023;2024 1672 1672 141;1921 1 HHPEHFSGR TITGYRIRHHPEHFSG HPEHFSGRPREDRVPH R H H G R P 0 1 0 0 0 0 1 1 3 0 0 0 0 1 1 1 0 0 0 0 0 0 9 0 1102.5057 P02751;H0Y7Z1 P02751 1392 1400 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 0.019587 40.058 By MS/MS 1 115410 115410 0 870 843 930 2025 1673 1673 1 HHQSLSRPEGPSK H H S K 0 1 0 0 0 1 1 1 2 0 1 1 0 0 2 3 0 0 0 0 0 0 13 1 1458.7328 REV__A2A3C1 yes no 2 0.011047 57.434 By MS/MS By matching 2 1 971810 628940 342880 + 871 1525 931 2026;2027;2028 1674 1674 1870 1 HIDRNYEPLK AFKPTSNRHIDRNYEP DRNYEPLKTQPKKYAK R H I L K T 0 1 1 1 0 0 1 0 1 1 1 1 0 0 1 0 0 0 1 0 0 0 10 1 1283.6622 Q12929 Q12929 520 529 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 3 0.012321 59.153 By MS/MS By matching 1 1 818810 462870 355930 872 1073 932 2029;2030 1675;1676 1676 2447 2 HIISATSLSTSPTELGSR SWREGGGRHIISATSL SPTELGSRNSSTGDGA R H I S R N 1 1 0 0 0 0 1 1 1 2 2 0 0 0 1 5 3 0 0 0 0 0 18 0 1855.964 Q5JSZ5 Q5JSZ5 216 233 PRRC2B Protein PRRC2B yes yes 2 9.9682E-09 90.697 By matching By MS/MS 1 1 3366100 1720500 1645600 873 1158 933 2031;2032 1677 1677 1350 1 HIKEEPLSEEEPCTSTAIASPEK KKKRGKKKHIKEEPLS TAIASPEKKKKKKKKR K H I E K K 2 0 0 0 1 0 6 0 1 2 1 2 0 0 3 3 2 0 0 0 0 0 23 1 2581.2218 Q9Y2X3 Q9Y2X3 495 517 NOP58 Nucleolar protein 58 yes yes 3 0.0069643 45.011 By MS/MS By matching 1 1 13255000 7426300 5828200 874 1502 934 2033;2034 1678 1678 1843;1844;2242 1 HIKEEPLSEEEPCTSTAIASPEKK KKKRGKKKHIKEEPLS AIASPEKKKKKKKKRE K H I K K K 2 0 0 0 1 0 6 0 1 2 1 3 0 0 3 3 2 0 0 0 0 0 24 2 2709.3167 Q9Y2X3 Q9Y2X3 495 518 NOP58 Nucleolar protein 58 yes yes 3;4 0.00034571 57.02 By MS/MS By MS/MS 2 2 63685000 35521000 28164000 875 1502 935;936 2035;2036;2037;2038 1679;1680;1681 1679 1843;1844;2242 3 HIVSNDSSDSDDESHEPK ELENITTKHIVSNDSS DDESHEPKGTENEDAG K H I P K G 0 0 1 4 0 0 2 0 2 1 0 1 0 0 1 5 0 0 0 1 0 0 18 0 1996.8246 P47712 P47712 428 445 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 3 0.0075413 44.788 By matching By MS/MS 1 1 2077100 1184200 892940 876 970 937 2039;2040 1682 1682 1104 1 HKAAAYDISEDEED CSPANLSRHKAAAYDI DISEDEED________ R H K E D - 3 0 0 3 0 0 3 0 1 1 0 1 0 0 0 1 0 0 1 0 0 0 14 1 1591.6638 P49585 P49585 354 367 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 2 0.010632 54.898 By MS/MS By matching 1 1 12407000 6299700 6107600 877 977 938 2041;2042 1683 1683 1117 1 HLEAADKGHSPAQKPK GTEFNKQKHLEAADKG HSPAQKPKTSSGTKPS K H L P K T 3 0 0 1 0 1 1 1 2 0 1 3 0 0 2 1 0 0 0 0 0 0 16 2 1712.8958 Q14966;A0A096LPI0;A0A096LPB4;A0A096LPH6 Q14966 596 611 ZNF638 Zinc finger protein 638 yes no 4 0.00042756 64.298 By MS/MS By MS/MS 1 1 10641000 3969100 6672000 878 1110 939 2043;2044 1684;1685 1684 1294 2 HLEVDVWVIEPQGLR LQPGRLAKHLEVDVWV VIEPQGLRFLHVPDTF K H L L R F 0 1 0 1 0 1 2 1 1 1 2 0 0 0 1 0 0 1 0 3 0 0 15 0 1788.9523 Q5T987;Q5T985;P19823 Q5T987 183 197 ITIH2 Inter-alpha-trypsin inhibitor heavy chain H2 yes no 3 0.0073524 53.995 By MS/MS By matching 1 1 1248700 761240 487490 879 916 940 2045;2046 1686 1686 0 HLHFVDVDDLHIIVQELR AASAPAEKHLHFVDVD HIIVQELRGSILDAMR K H L L R G 0 1 0 3 0 1 1 0 3 2 3 0 0 1 0 0 0 0 0 3 0 0 18 0 2197.1644 Q6PCB0 Q6PCB0 189 206 VWA1 von Willebrand factor A domain-containing protein 1 yes yes 4 1.8249E-27 118.52 By MS/MS By MS/MS 1 1 4053300 2813800 1239400 880 1197 941 2047;2048 1687;1688;1689 1687 3 HLLSPVGR TEPGLASRHLLSPVGR HLLSPVGRRQVAGHT_ R H L G R R 0 1 0 0 0 0 0 1 1 0 2 0 0 0 1 1 0 0 0 1 0 0 8 0 877.51339 H7C0W5;H7C1Q6;H7BXF4;B1PBA3;Q9NXE4 H7C0W5 299 306 SMPD4 Sphingomyelin phosphodiesterase 4 yes no 2 0.0099799 80.231 By matching By MS/MS 1 1 1132800 601640 531150 881 258 942 2049;2050 1690 1690 328 1 HLSLPAGQVVPK VELTPMKKHLSLPAGQ PAGQVVPKINSLSLIR K H L P K I 1 0 0 0 0 1 0 1 1 0 2 1 0 0 2 1 0 0 0 2 0 0 12 0 1244.7241 Q8IXS8 Q8IXS8 428 439 FAM126B Protein FAM126B yes yes 2 0.010296 55.04 By matching By MS/MS 1 1 429680 140920 288770 882 1245 943 2051;2052 1691 1691 1471 1 HLSTPSSVSPEPQDSAK LQKARHPKHLSTPSSV PEPQDSAKLRQSGLAN K H L A K L 1 0 0 1 0 1 1 0 1 0 1 1 0 0 3 5 1 0 0 1 0 0 17 0 1765.8483 E9PMR6;Q9NZN5 E9PMR6 526 542 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2;3 0.00021495 80.859 By MS/MS By matching 2 2 5015900 3540700 1475200 883 468 944 2053;2054;2055;2056 1692;1693 1692 553 2 HLTPEPDIVASTK VAPAKPPRHLTPEPDI PDIVASTKKPVPARPP R H L T K K 1 0 0 1 0 0 1 0 1 1 1 1 0 0 2 1 2 0 0 1 0 0 13 0 1406.7405 Q5JSH3;H7BY83 Q5JSH3 217 229 WDR44 WD repeat-containing protein 44 yes no 2 0.0093171 73.219 By MS/MS By matching 1 1 1268700 729290 539380 884 1156 945 2057;2058 1694 1694 2173 1 HNLDVVSPIPANK RGVLESVKHNLDVVSP VSPIPANKDLSEADLR K H N N K D 1 0 2 1 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 2 0 0 13 0 1402.7569 A0A0A0MSK6;Q13017 A0A0A0MSK6 759 771 ARHGAP5 Rho GTPase-activating protein 5 yes no 2 0.0054584 59.884 By matching By MS/MS 1 1 1014400 595510 418870 885 120 946 2059;2060 1695 1695 148 1 HNSWSSSSR QSKSFRRRHNSWSSSS NSWSSSSRHPNQATPK R H N S R H 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 5 0 1 0 0 0 0 9 0 1046.453 H3BQ37;H3BPW9;Q96F86 H3BQ37 159 167 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2 0.0091579 68.132 By MS/MS By MS/MS 2 2 4799000 2916100 1882800 886 650 947 2061;2062;2063;2064 1696;1697;1698 1697 765;766 3 HPDIYAVPIK ARIEIAQKHPDIYAVP DIYAVPIKTHKPDPGT K H P I K T 1 0 0 1 0 0 0 0 1 2 0 1 0 0 2 0 0 0 1 1 0 0 10 0 1151.6339 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1173 1182 TJP2 Tight junction protein ZO-2 yes no 2 0.01756 62.546 By MS/MS 1 1177700 0 1177700 887 211 948 2065 1699 1699 2285 1 HPDYSVVLLLR FLYEYARRHPDYSVVL YSVVLLLRLAKTYETT R H P L R L 0 1 0 1 0 0 0 0 1 0 3 0 0 0 1 1 0 0 1 2 0 0 11 0 1310.7347 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 362 372 ALB Serum albumin yes no 3 0.00035733 86.898 By MS/MS 1 307510 0 307510 + 888 152 949 2066 1700 1700 1 HPGGGDYEEL GGGAPGGRHPGGGDYE GGGDYEEL________ R H P E L - 0 0 0 1 0 0 2 3 1 0 1 0 0 0 1 0 0 0 1 0 0 0 10 0 1072.4462 H0Y4Z8;Q3YEC7 H0Y4Z8 721 730 RABL6 Rab-like protein 6 yes no 2 0.0023126 84.244 By MS/MS By MS/MS 1 1 4417600 2207700 2209900 889 588 950 2067;2068 1701;1702;1703 1703 2355 3 HPYFYAPELLFFAK YLYEIARRHPYFYAPE PELLFFAKRYKAAFTE R H P A K R 2 0 0 0 0 0 1 0 1 0 2 1 0 3 2 0 0 0 2 0 0 0 14 0 1741.8868 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;H7C013 A0A0C4DGB6 170 183 ALB Serum albumin yes no 2;3 1.0331E-34 152.07 By MS/MS By MS/MS 2 2 22963000 14762000 8201000 + 890 152 951 2069;2070;2071;2072 1704;1705;1706 1704 3 HQQQLLASPGSSTVDNK RLHGQLQRHQQQLLAS GSSTVDNKMLDDLYED R H Q N K M 1 0 1 1 0 3 0 1 1 0 2 1 0 0 1 3 1 0 0 1 0 0 17 0 1808.9017 F2Z2X4;Q9C0E2 F2Z2X4 514 530 XPO4 Exportin-4 yes no 3 0.0012957 59.15 By matching By MS/MS 1 1 4236700 2609500 1627200 891 482 952 2073;2074 1707 1707 568 1 HQTLEVSLSRDSPLK LRVQGKEKHQTLEVSL LSRDSPLKTLMSHYEE K H Q L K T 0 1 0 1 0 1 1 0 1 0 3 1 0 0 1 3 1 0 0 1 0 0 15 1 1708.9108 H3BSZ7;Q8NCF5 H3BSZ7 79 93 NFATC2IP NFATC2-interacting protein yes no 3 0.0011373 79.639 By MS/MS By matching 1 1 3933000 2246300 1686700 892 663 953 2075;2076 1708 1708 781 1 HRPSEADEEELAR EEEQRRPKHRPSEADE ADEEELARRREARKQE K H R A R R 2 2 0 1 0 0 4 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 13 1 1537.7121 O14617 O14617 655 667 AP3D1 AP-3 complex subunit delta-1 yes yes 3 4.022E-07 106.54 By MS/MS By MS/MS 1 1 2907800 1672800 1235000 893 760 954 2077;2078 1709;1710 1709 887 2 HRPSPPATPPPK SASPPRRRHRPSPPAT PPATPPPKTRHSPTPQ R H R P K T 1 1 0 0 0 0 0 0 1 0 0 1 0 0 6 1 1 0 0 0 0 0 12 1 1280.699 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 394 405 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.00013654 99.915 By MS/MS By MS/MS 2 3 11098000 4775900 6321800 894 247 955 2079;2080;2081;2082;2083 1711;1712;1713;1714;1715;1716;1717;1718;1719;1720;1721;1722 1712 303;1944 12 HSLLLSSSPNR NSTTIMSRHSLLLSSS LLSSSPNRIPSSRLHQ R H S N R I 0 1 1 0 0 0 0 0 1 0 3 0 0 0 1 4 0 0 0 0 0 0 11 0 1209.6466 G1UD79 G1UD79 57 67 SPACIA2 yes yes 2 0.0030792 71.888 By MS/MS By matching 1 1 1206300 687650 518680 895 545 956 2084;2085 1723 1723 640 1 HSRSPFEDSR NVSASKKRHSRSPFED RSPFEDSRGYMMMFPR R H S S R G 0 2 0 1 0 0 1 0 1 0 0 0 0 1 1 3 0 0 0 0 0 0 10 1 1216.5585 O14654 O14654 732 741 IRS4 Insulin receptor substrate 4 yes yes 3 0.019918 51.612 By MS/MS By matching 1 1 1325300 719260 606030 896 761 957 2086;2087 1724 1724 1 HSSPTEERDEPAYPR LQFRSLSRHSSPTEER RDEPAYPRGDSSGSTR R H S P R G 1 2 0 1 0 0 3 0 1 0 0 0 0 0 3 2 1 0 1 0 0 0 15 1 1769.7969 F5H4R1;J3KNB8;F5H538;Q9Y6R4 F5H4R1 1250 1264 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 yes no 3 0.0031034 56.286 By MS/MS By matching 1 1 2895200 1655000 1240100 897 499 958 2088;2089 1725 1725 2008 1 HSTPSPTR RNADSEIKHSTPSPTR HSTPSPTRYSLSPSKS K H S T R Y 0 1 0 0 0 0 0 0 1 0 0 0 0 0 2 2 2 0 0 0 0 0 8 0 881.43553 P49792 P49792 777 784 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.011775 92.239 By MS/MS By matching 1 1 3652900 2072200 1580800 898 981 959 2090;2091 1726 1726 1127 1 HTDDEMTGYVATR ILDFGLARHTDDEMTG MTGYVATRWYRAPEIM R H T T R W 1 1 0 2 0 0 1 1 1 0 0 0 1 0 0 0 3 0 1 1 0 0 13 0 1494.6409 E7EX54;B4E0K5;Q16539 E7EX54 97 109 MAPK14 Mitogen-activated protein kinase 14 yes no 2;3 0.00015481 94.547 By MS/MS By MS/MS 2 3 24223000 5955600 18267000 899 273 960;961 2092;2093;2094;2095;2096 1727;1728;1729;1730;1731 1731 48 1952;2301 5 HTFSGVASVESSSGEAFHVGK HRAHYDLRHTFSGVAS GEAFHVGKTPIVGQPS R H T G K T 2 0 0 0 0 0 2 3 2 0 0 1 0 2 0 5 1 0 0 3 0 0 21 0 2118.997 CON__P12763 CON__P12763 313 333 yes yes 3 0.0008682 54.74 By MS/MS By matching 2 1 3094500 1909300 1185100 + 900 355 962;963 2097;2098;2099 1732;1733 1732 420 2 HTGPNSPDTANDGFVR VEMDWVLKHTGPNSPD TANDGFVRLRGLPFGC K H T V R L 1 1 2 2 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 16 0 1683.7601 G8JLB6;P31943;E5RGH4;E7EQJ0;D6RAM1;H0YAQ2;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RIU0;D6RDU3;D6RJ04;D6RIH9;D6RBM0;E9PCY7;P55795 G8JLB6 99 114 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 yes no 2;3 5.2606E-35 142.76 By MS/MS By MS/MS 2 2 125930000 76638000 49295000 901 576 964 2100;2101;2102;2103 1734;1735;1736 1735 685;2032 3 HVDSLSQRSPK KNSEPSARHVDSLSQR SLSQRSPKASLRRVEL R H V P K A 0 1 0 1 0 1 0 0 1 0 1 1 0 0 1 3 0 0 0 1 0 0 11 1 1252.6524 K7EJV0;K7EPY1;K7ENL0;Q9UHD8 K7EJV0 62 72 SEPT9 Septin-9 yes no 2 0.0057049 61.48 By matching By MS/MS 1 1 1435400 876100 559330 902 726 965 2104;2105 1737 1737 848 0 HVFFVDDFDAFK IGSKPSARHVFFVDDF VDDFDAFKKIEDELIT R H V F K K 1 0 0 3 0 0 0 0 1 0 0 1 0 4 0 0 0 0 0 2 0 0 12 0 1485.6929 Q05707;A0A0A0MQT7 Q05707 1188 1199 COL14A1 Collagen alpha-1(XIV) chain yes no 2 0.0056069 71.349 By MS/MS By matching 1 1 1221500 863890 357610 903 1053 966 2106;2107 1738 1738 1 HVFIVDDFESFEK IASKPSERHVFIVDDF DDFESFEKIEDNLITF R H V E K I 0 0 0 2 0 0 2 0 1 1 0 1 0 3 0 1 0 0 0 2 0 0 13 0 1610.7617 D6RGG3;Q99715;A0A087X0A8;H0Y5N9;H0Y991 D6RGG3 2479 2491 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0007007 94.309 By MS/MS By MS/MS 1 1 2028400 1387800 640660 904 379 967 2108;2109 1739;1740 1740 2 HYEDGYPGGSDNYGSLSR YPPDGYSRHYEDGYPG DNYGSLSRVTRIEERY R H Y S R V 0 1 1 2 0 0 1 4 1 0 1 0 0 0 1 3 0 0 3 0 0 0 18 0 1972.8187 C9JZR2;O60716;E9PRE2 C9JZR2 216 233 CTNND1 Catenin delta-1 yes no 3 2.7869E-10 95.554 By MS/MS By MS/MS 1 1 13722000 7634300 6087400 905 348 968 2110;2111 1741;1742 1741 2319 2 HYGITSPISLAAPK QQTQPPQKHYGITSPI PISLAAPKETDCVLTQ K H Y P K E 2 0 0 0 0 0 0 1 1 2 1 1 0 0 2 2 1 0 1 0 0 0 14 0 1453.7929 G3V457;G3V3I9;A0A0C4DGK1;G3XAH6;P51003 G3V457 19 32 PAPOLA Poly(A) polymerase alpha yes no 2 0.00016697 86.699 By MS/MS By matching 1 1 1603200 957580 645640 906 159 969 2112;2113 1743 1743 202 1 HYYIAAEEIIWNYAPSGIDIFTK NIRGKHVRHYYIAAEE SGIDIFTKENLTAPGS R H Y T K E 3 0 1 1 0 0 2 1 1 5 0 1 0 1 1 1 1 1 3 0 0 0 23 0 2713.3428 E9PFZ2;P00450;H7C5R1 E9PFZ2 373 395 CP Ceruloplasmin yes no 3 3.0249E-72 153.83 By MS/MS By MS/MS 1 1 36532000 18471000 18061000 907 444 970 2114;2115 1744;1745 1744 2 HYYIGIIETTWDYASDHGEK TPAWAKEKHYYIGIIE YASDHGEKKLISVDTE K H Y E K K 1 0 0 2 0 0 2 2 2 3 0 1 0 0 0 1 2 1 3 0 0 0 20 0 2397.0913 E9PFZ2;P00450;D6RE86 E9PFZ2 23 42 CP Ceruloplasmin yes no 3 0.0011236 59.372 By matching By MS/MS 1 1 3994600 2475600 1519000 908 444 971 2116;2117 1746 1746 1 IAAPELHKGDSDSEEDEPTK KKRKEPVKIAAPELHK SEEDEPTKKKTILQGS K I A T K K 2 0 0 3 0 0 4 1 1 1 1 2 0 0 2 2 1 0 0 0 0 0 20 1 2166.9917 Q92733 Q92733 147 166 PRCC Proline-rich protein PRCC yes yes 3 0.013976 45.577 By MS/MS By matching 1 1 12109000 6580100 5529200 909 1310 972 2118;2119 1747 1747 1 IAASSSFR FPCTTAPKIAASSSFR IAASSSFRSSDKPIRT K I A F R S 2 1 0 0 0 0 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 8 0 837.43447 Q99961 Q99961 283 290 SH3GL1 Endophilin-A2 yes yes 2 0.0043199 101.46 By MS/MS By MS/MS 1 1 16725000 9288000 7437100 910 1359 973 2120;2121 1748;1749;1750 1749 1618 3 IACKSPPPESMDTPTSTR TTDDKTTKIACKSPPP MDTPTSTRRRPKTPLG K I A T R R 1 1 0 1 1 0 1 0 0 1 0 1 1 0 4 3 3 0 0 0 0 0 18 1 1973.9187 P46013 P46013 2101 2118 MKI67 Antigen KI-67 yes yes 3 0.010543 45.511 By matching By MS/MS 1 1 2699800 1142300 1557500 911 964 974 2122;2123 1751 1751 1088 1 IACKSPPPESVDTPTSTK MTDEKTTKIACKSPPP VDTPTSTKQWPKRSLR K I A T K Q 1 0 0 1 1 0 1 0 0 1 0 2 0 0 4 3 3 0 0 1 0 0 18 1 1913.9404 P46013 P46013 1127 1144 MKI67 Antigen KI-67 yes yes 2;3 1.0212E-28 126.51 By MS/MS By MS/MS 2 2 10029000 7331300 2697600 912 964 975 2124;2125;2126;2127 1752;1753;1754;1755 1754 1089 4 IACKSPQPDPVDTPASTK TTDEKTTKIACKSPQP VDTPASTKQRPKRNLR K I A T K Q 2 0 0 2 1 1 0 0 0 1 0 2 0 0 4 2 2 0 0 1 0 0 18 1 1910.9408 P46013 P46013 2340 2357 MKI67 Antigen KI-67 yes yes 2 0.014114 49.395 By MS/MS 1 1990900 1990900 0 913 964 976 2128 1756 1756 1 IADPEHDHTGFLTEYVATR ICDFGLARIADPEHDH LTEYVATRWYRAPEIM R I A T R W 2 1 0 2 0 0 2 1 2 1 1 0 0 1 1 0 3 0 1 1 0 0 19 0 2171.0283 B3KR49;E9PJF0;E9PQW4;P27361 B3KR49 76 94 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 3 7.408E-33 131.45 By MS/MS By MS/MS 1 1 42543000 21634000 20909000 914 260 977 2129;2130 1757;1758 1757 2296 2 IAELRELQMDQQAKK SQDKSLRRIAELRELQ QMDQQAKKHLQEEFDA R I A K K H 2 1 0 1 0 3 2 0 0 1 2 2 1 0 0 0 0 0 0 0 0 0 15 2 1799.9564 E7EVX2 E7EVX2 195 209 GOLGA4 yes yes 3 0.0093917 54.871 By MS/MS 1 0 0 0 915 428 978 2131 1759 1759 1 IALVITDGR LPPSPNNRIALVITDG ALVITDGRSDTQRDTT R I A G R S 1 1 0 1 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 956.56548 A0A087X0S5;P12109 A0A087X0S5 721 729 COL6A1 Collagen alpha-1(VI) chain yes no 2 0.0061677 83.265 By MS/MS By MS/MS 1 1 746660 498390 248270 916 74 979 2132;2133 1760;1761 1760 2 IAQVSPGPR GRSASKLRIAQVSPGP AQVSPGPRDSPAFPDS R I A P R D 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 1 0 0 0 1 0 0 9 0 923.51886 Q9NQS7 Q9NQS7 259 267 INCENP Inner centromere protein yes yes 2 0.0013385 117.52 By MS/MS By MS/MS 1 1 11140000 6375100 4765000 917 1415 980 2134;2135 1762;1763 1762 1710 2 IASDEEIQGTK KKASRTARIASDEEIQ DEEIQGTKDAVIQDLE R I A T K D 1 0 0 1 0 1 2 1 0 2 0 1 0 0 0 1 1 0 0 0 0 0 11 0 1189.5826 Q8WX93 Q8WX93 891 901 PALLD Palladin yes yes 2 0.00045815 91.307 By MS/MS By MS/MS 1 1 3415800 3415800 0 918 1293 981 2136;2137 1764;1765 1765 1526 1 IASDEEIQGTKDAVIQDLER KKASRTARIASDEEIQ AVIQDLERKLRFKEDL R I A E R K 2 1 0 3 0 2 3 1 0 3 1 1 0 0 0 1 1 0 0 1 0 0 20 1 2229.1125 Q8WX93 Q8WX93 891 910 PALLD Palladin yes yes 3 1.1031E-05 80.738 By MS/MS By matching 1 1 2032100 1233100 799000 919 1293 982 2138;2139 1766 1766 1526 1 IATGSFLK PIEWVCRRIATGSFLK IATGSFLKRNPGVKEG R I A L K R 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 1 1 0 0 0 0 0 8 0 835.48035 E9PBS1;P22234;D6RF62 E9PBS1 103 110 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 0.012325 74.165 By matching By MS/MS 1 1 796530 362400 434130 920 433 983 2140;2141 1767 1767 512 1 ICRDPQTPVLQTK PSKSSVTKICRDPQTP QTPVLQTKHRARAVTC K I C T K H 0 1 0 1 1 2 0 0 0 1 1 1 0 0 2 0 2 0 0 1 0 0 13 1 1554.8188 Q9ULW0 Q9ULW0 363 375 TPX2 Targeting protein for Xklp2 yes yes 2;3 0.004168 75.819 By MS/MS By MS/MS 2 2 6003300 3312500 2690900 921 1475 984 2142;2143;2144;2145 1768;1769 1768 2230 2 ICTEQSNSPPPIR HKFYKQNKICTEQSNS SNSPPPIRRQPTWSRS K I C I R R 0 1 1 0 1 1 1 0 0 2 0 0 0 0 3 2 1 0 0 0 0 0 13 0 1497.7246 Q15678 Q15678 307 319 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 0.018975 47.621 By MS/MS By matching 1 1 1364100 1109900 254190 922 1130 985 2146;2147 1770 1770 1 IDASKNEEDEGHSNSSPR SAESEGAKIDASKNEE GHSNSSPRHSEAATAQ K I D P R H 1 1 2 2 0 0 3 1 1 1 0 1 0 0 1 4 0 0 0 0 0 0 18 1 1970.8566 D6RAF8;Q14103;D6RD83 D6RAF8 68 85 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2;3 1.8249E-55 151.59 By MS/MS By MS/MS 5 5 223390000 127620000 95775000 923 367 986;987;988 2148;2149;2150;2151;2152;2153;2154;2155;2156;2157 1771;1772;1773;1774;1775;1776;1777;1778;1779;1780;1781 1772 426;427;428 10 IDEDGENTQIEDTEPMSPVLNSK MESLSSHRIDEDGENT MSPVLNSKFVPAENDS R I D S K F 0 0 2 3 0 1 4 1 0 2 1 1 1 0 2 2 2 0 0 1 0 0 23 0 2560.1487 Q12888;A6NNK5;C9JXV0 Q12888 536 558 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.00034545 56.247 By MS/MS By matching 1 1 6316400 3695800 2620600 924 1069 989 2158;2159 1782 1782 1223 1 IDEPLEGSEDR HESGASIKIDEPLEGS PLEGSEDRIITITGTQ K I D D R I 0 1 0 2 0 0 3 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 11 0 1258.5677 P61978;S4R359 P61978 423 433 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.017725 57.532 By MS/MS By matching 1 1 4442400 2588200 1854300 925 1018 990 2160;2161 1783 1783 1 IDFSSIAVPGTSSPR VQFPNLPRIDFSSIAV VPGTSSPRQRQPPGTQ R I D P R Q 1 1 0 1 0 0 0 1 0 2 0 0 0 1 2 4 1 0 0 1 0 0 15 0 1532.7835 Q5TDH0 Q5TDH0 94 108 DDI2 Protein DDI1 homolog 2 yes yes 2 0.0020277 58.83 By MS/MS By matching 1 1 11279000 6366300 4912200 926 1173 991 2162;2163 1784 1784 1378 1 IDFTPVSPAPSPTR EKLYSPKRIDFTPVSP SPAPSPTRGFGKMFVS R I D T R G 1 1 0 1 0 0 0 0 0 1 0 0 0 1 4 2 2 0 0 1 0 0 14 0 1483.7671 G1UD79;Q7Z309 G1UD79 128 141 SPACIA2;FAM122B Protein FAM122B yes no 2 0.0021239 63.827 By MS/MS 1 1007700 0 1007700 927 545 992 2164 1785 1785 641;642;2019 1 IDISPSTFR KSPEIHRRIDISPSTF DISPSTFRKHGLAHDE R I D F R K 0 1 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 9 0 1034.5397 Q9Y2W1 Q9Y2W1 679 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 1.9911E-05 139.15 By MS/MS By MS/MS 1 1 22332000 11485000 10847000 928 1501 993 2165;2166 1786;1787 1786 1841 2 IDISPSTLR KSPEIHRRIDISPSTL DISPSTLRKHTRLAGE R I D L R K 0 1 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 9 0 1000.5553 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 653 661 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0012583 110.54 By MS/MS By MS/MS 1 1 52665000 26841000 25825000 929 457 994 2167;2168 1788;1789 1789 538 2 IDISPSTLRK KSPEIHRRIDISPSTL ISPSTLRKHTRLAGEE R I D R K H 0 1 0 1 0 0 0 0 0 2 1 1 0 0 1 2 1 0 0 0 0 0 10 1 1128.6503 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 653 662 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.00037324 95.618 By MS/MS By MS/MS 1 1 7474100 3749000 3725200 930 457 995 2169;2170 1790;1791 1790 538 2 IDSNISPK MKTSCKFKIDSNISPK IDSNISPKKDSKEFTQ K I D P K K 0 0 1 1 0 0 0 0 0 2 0 1 0 0 1 2 0 0 0 0 0 0 8 0 872.46035 Q9H501 Q9H501 148 155 ESF1 ESF1 homolog yes yes 2 0.01213 91.701 By matching By MS/MS 1 1 2169400 1249900 919560 931 1399 996 2171;2172 1792 1792 1685 1 IDSPGFKPASQQVYR AQPQPIHRIDSPGFKP PASQQVYRKDPYPEEM R I D Y R K 1 1 0 1 0 2 0 1 0 1 0 1 0 1 2 2 0 0 1 1 0 0 15 1 1691.8631 A0A087X0K9;G5E9E7 A0A087X0K9 898 912 TJP1 yes no 3 5.2269E-06 99.991 By MS/MS By MS/MS 1 1 4769800 2932100 1837700 932 71 997 2173;2174 1793;1794 1793 81 2 IDTIEIITDR DYFEEYGKIDTIEIIT TIEIITDRQSGKKRGF K I D D R Q 0 1 0 2 0 0 1 0 0 4 0 0 0 0 0 0 2 0 0 0 0 0 10 0 1187.6398 A0A087WUI2;P22626 A0A087WUI2 138 147 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.00010682 120.12 By MS/MS By matching 1 1 3302400 1980800 1321700 933 27 998 2175;2176 1795 1795 1 IDTLMYLLAYPQK IGYNQRNRIDTLMYLL YLLAYPQKPMVKTKTI R I D Q K P 1 0 0 1 0 1 0 0 0 1 3 1 1 0 1 0 1 0 2 0 0 0 13 0 1567.832 Q9NW08 Q9NW08 705 717 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.0031335 65.305 By MS/MS 1 2245800 0 2245800 934 1430 999 2177 1796 1796 245 2226 1 IEDANLIPPVPDDKFQDLVDAVR DPSSPAFRIEDANLIP QDLVDAVRAEKGFLLL R I E V R A 2 1 1 5 0 1 1 0 0 2 2 1 0 1 3 0 0 0 0 3 0 0 23 1 2578.3279 P07996;A8MZG1 P07996 61 83 THBS1 Thrombospondin-1 yes no 3 0.012715 37.825 By MS/MS 1 2465200 2465200 0 + 935 870 1000 2178 1797 1797 1 IEDGVPQHLVLVLGGK FVKSAGSRIEDGVPQH LVLVLGGKSQDDVSRF R I E G K S 0 0 0 1 0 1 1 3 1 1 3 1 0 0 1 0 0 0 0 3 0 0 16 0 1672.9512 E7ENL6;P12111 E7ENL6 929 944 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.012051 39.947 By matching By MS/MS 1 1 716180 497570 218610 936 403 1001 2179;2180 1798 1798 1 IEDVGSDEEDDSGK KDDEEKPKIEDVGSDE DEEDDSGKDKKKKTKK K I E G K D 0 0 0 4 0 0 3 2 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 0 1493.6005 P08238;Q58FF8 P08238 250 263 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 2.9477E-71 166.79 By MS/MS By MS/MS 1 2 19960000 6267200 13692000 937 871 1002 2181;2182;2183 1799;1800;1801;1802 1802 1000 4 IEDVGSDEEDDSGKDK KDDEEKPKIEDVGSDE EDDSGKDKKKKTKKIK K I E D K K 0 0 0 5 0 0 3 2 0 1 0 2 0 0 0 2 0 0 0 1 0 0 16 1 1736.7224 P08238;Q58FF8 P08238 250 265 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 1.8011E-188 194.32 By MS/MS By MS/MS 2 4 101220000 37296000 63927000 938 871 1003 2184;2185;2186;2187;2188;2189 1803;1804;1805;1806;1807;1808 1805 1000 6 IEDVGSDEEDDSGKDKK KDDEEKPKIEDVGSDE DDSGKDKKKKTKKIKE K I E K K K 0 0 0 5 0 0 3 2 0 1 0 3 0 0 0 2 0 0 0 1 0 0 17 2 1864.8174 P08238;Q58FF8 P08238 250 266 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 8.5611E-84 170.47 By MS/MS By MS/MS 3 3 256990000 152270000 104720000 939 871 1004 2190;2191;2192;2193;2194;2195 1809;1810;1811;1812;1813;1814;1815;1816 1814 1000 8 IEEFVYEKLDR LQPNPNARIEEFVYEK FVYEKLDRKAPSRINN R I E D R K 0 1 0 1 0 0 3 0 0 1 1 1 0 1 0 0 0 0 1 1 0 0 11 1 1439.7296 A0A087WW40;Q9Y371 A0A087WW40 75 85 SH3GLB1 Endophilin-B1 yes no 2 0.00068201 91.584 By MS/MS By MS/MS 1 1 3657800 1921900 1735800 940 40 1005 2196;2197 1817;1818 1817 2258 2 IEEGVPQFLVLISSGK FKRPLGSRIEEGVPQF LVLISSGKSDDEVDDP R I E G K S 0 0 0 0 0 1 2 2 0 2 2 1 0 1 1 2 0 0 0 2 0 0 16 0 1714.9505 E7ENL6;P12111 E7ENL6 725 740 COL6A3 Collagen alpha-3(VI) chain yes no 2 3.6551E-07 98.942 By MS/MS By MS/MS 1 1 8690400 4706200 3984200 941 403 1006 2198;2199 1819;1820 1819 2 IEEVLSPEGSPSKSPSK ITIKSPEKIEEVLSPE SPSKSPSKKKKKFRTP K I E S K K 0 0 0 0 0 0 3 1 0 1 1 2 0 0 3 5 0 0 0 1 0 0 17 1 1769.9047 Q9UEY8 Q9UEY8 668 684 ADD3 Gamma-adducin yes yes 2 0.0062624 55.452 By matching By MS/MS 1 1 1306600 671820 634780 942 1452 1007 2200;2201 1821 1821 1756;1757;1758 1 IEIAQKHPDIYAVPIK LQEAQNARIEIAQKHP DIYAVPIKTHKPDPGT R I E I K T 2 0 0 1 0 1 1 0 1 4 0 2 0 0 2 0 0 0 1 1 0 0 16 1 1834.0353 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1167 1182 TJP2 Tight junction protein ZO-2 yes no 3 0.0053799 53.3 By MS/MS By MS/MS 1 1 1788800 1125600 663240 943 211 1008 2202;2203 1822;1823 1822 2285 2 IEIESFYEGEDFSETLTR LSSQHQARIEIESFYE DFSETLTRAKFEELNM R I E T R A 0 1 0 1 0 0 5 1 0 2 1 0 0 2 0 2 2 0 1 0 0 0 18 0 2163.9848 P11021 P11021 307 324 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0002941 96.464 By MS/MS By MS/MS 1 1 7643600 4288800 3354800 944 884 1009 2204;2205 1824;1825 1824 2 IEKIGEGTYGVVYK ________________ GTYGVVYKGRHKTTGQ K I E Y K G 0 0 0 0 0 0 2 3 0 2 0 2 0 0 0 0 1 0 2 2 0 0 14 1 1554.8294 E5RIU6;A0A087WZZ9;A0A024QZP7;P06493 E5RIU6 7 20 CDK1;CDC2 Cyclin-dependent kinase 1 yes no 2;3 0.0045874 72.615 By MS/MS By MS/MS 3 2 11368000 7272800 4095200 945 1 1010;1011 2206;2207;2208;2209;2210 1826;1827;1828;1829 1829 1886;2253;2254 4 IEPIPGESPK KGQEVCVKIEPIPGES PIPGESPKMFGRHFEA K I E P K M 0 0 0 0 0 0 2 1 0 2 0 1 0 0 3 1 0 0 0 0 0 0 10 0 1065.5706 A0A087WUT6;O60841 A0A087WUT6 1161 1170 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0017209 81.525 By MS/MS By MS/MS 1 1 1342300 754930 587350 946 28 1012 2211;2212 1830;1831;1832 1831 24 3 IESDEEEDFENVGK ESTKKPYRIESDEEED EDFENVGKVGSPLDYS R I E G K V 0 0 1 2 0 0 5 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 14 0 1638.6897 Q96T23 Q96T23 1343 1356 RSF1 Remodeling and spacing factor 1 yes yes 2 0.014628 48.112 By matching By MS/MS 1 1 3407400 2041700 1365700 947 1352 1013 2213;2214 1833 1833 1605 1 IETIEVMEDR DYFEKYGKIETIEVME TIEVMEDRQSGKKRGF K I E D R Q 0 1 0 1 0 0 3 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1233.5911 P51991 P51991 152 161 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 2 0.01752 49.423 By MS/MS 1 0 0 0 948 998 1014 2215 1834 1834 179 1 IEVIEIMTDR DYFEQYGKIEVIEIMT VIEIMTDRGSGKKRGF K I E D R G 0 1 0 1 0 0 2 0 0 3 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1217.6326 F8W6I7;P09651;F8VTQ5;H0YH80;F8VZ49;Q32P51;F8VYN5 F8W6I7 131 140 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 0.0045752 66.435 By MS/MS 1 0 0 0 949 527 1015 2216 1835 1835 86 1 IEVLDSPASK NSEGGKGKIEVLDSPA VLDSPASKKKK_____ K I E S K K 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 0 0 0 1 0 0 10 0 1057.5655 Q8N5I9 Q8N5I9 173 182 C12orf45 Uncharacterized protein C12orf45 yes yes 2 0.00093633 87.001 By MS/MS By MS/MS 1 1 1103400 606650 496710 950 1259 1016 2217;2218 1836;1837;1838;1839 1837 1485 4 IEVLEEELR DLKLKNTKIEVLEEEL EVLEEELRLARDANSE K I E L R L 0 1 0 0 0 0 4 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1128.6027 P15924 P15924 1034 1042 DSP Desmoplakin yes yes 2 0.0053091 85.161 By MS/MS By matching 1 1 1813900 1111300 702630 951 902 1017 2219;2220 1840 1840 1 IFAISQQQQQQSKSK QTEEAIDRIFAISQQQ QQQQSKSKKNRRAGKR R I F S K K 1 0 0 0 0 6 0 0 0 2 0 2 0 1 0 3 0 0 0 0 0 0 15 1 1747.9217 Q9UL01 Q9UL01 793 807 DSE Dermatan-sulfate epimerase yes yes 2 0.0053953 43.897 By MS/MS By matching 1 1 905280 480680 424600 952 1470 1018 2221;2222 1841 1841 1 IFGVTTLDIVR HGVYNPNKIFGVTTLD VTTLDIVRANTFVAEL K I F V R A 0 1 0 1 0 0 0 1 0 2 1 0 0 1 0 0 2 0 0 2 0 0 11 0 1232.7129 G3XAL0;P40926 G3XAL0 59 69 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 2 0.0039228 73.985 By MS/MS By matching 1 1 474570 282900 191670 953 569 1019 2223;2224 1842 1842 1 IFVEESIYDEFVR QCCIAASRIFVEESIY SIYDEFVRRSVERAKK R I F V R R 0 1 0 1 0 0 3 0 0 2 0 0 0 2 0 1 0 0 1 2 0 0 13 0 1644.8035 P00352 P00352 309 321 ALDH1A1 Retinal dehydrogenase 1 yes yes 2 0.00066982 94.616 By MS/MS By MS/MS 1 1 4250900 2543800 1707000 954 829 1020 2225;2226 1843;1844 1844 2 IFVGGLSPDTPEEK KTKEPVKKIFVGGLSP SPDTPEEKIREYFGGF K I F E K I 0 0 0 1 0 0 2 2 0 1 1 1 0 1 2 1 1 0 0 1 0 0 14 0 1487.7508 D6RAF8;Q14103;D6RF44;H0YA96;H0Y8G5 D6RAF8 184 197 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.0054459 61.435 By MS/MS By MS/MS 1 1 1455400 1034000 421350 955 367 1021 2227;2228 1845;1846 1846 2 IGEGTYGTVFK QKYEKLEKIGEGTYGT GTYGTVFKAKNRETHE K I G F K A 0 0 0 0 0 0 1 3 0 1 0 1 0 1 0 0 2 0 1 1 0 0 11 0 1170.5921 Q00535 Q00535 10 20 CDK5 Cyclin-dependent-like kinase 5 yes yes 2 0.012527 63.426 By MS/MS By matching 1 1 1355400 830230 525180 956 1036 1022 2229;2230 1847 1847 2439 1 IGEGTYGVVYK EDYTKIEKIGEGTYGV GTYGVVYKGRHKTTGQ K I G Y K G 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 0 11 0 1184.6077 E5RIU6;A0A087WZZ9;A0A024QZP7;P06493;G3V317;K7ELV5;E7ESI2;G3V5T9;P24941;Q00526 E5RIU6 10 20 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 no no 2 0.0017146 85.731 By MS/MS By MS/MS 3 3 222120000 127120000 94995000 957 1;416 1023;1024 2231;2232;2233;2234;2235;2236 1848;1849;1850;1851 1849 1886;1981;2253;2254;2329;2330 4 IGEGTYGVVYKGR EDYTKIEKIGEGTYGV YGVVYKGRHKTTGQVV K I G G R H 0 1 0 0 0 0 1 4 0 1 0 1 0 0 0 0 1 0 2 2 0 0 13 1 1397.7303 E5RIU6;A0A087WZZ9;A0A024QZP7;P06493 E5RIU6 10 22 CDK1;CDC2 Cyclin-dependent kinase 1 yes no 2 0.0040881 67.207 By MS/MS By matching 1 1 2570900 806110 1764700 958 1 1025 2237;2238 1852 1852 1886;2253;2254 1 IGGIGTVPVGR LPLQDVYKIGGIGTVP IGTVPVGRVETGVLKP K I G G R V 0 1 0 0 0 0 0 4 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1024.6029 Q5VTE0;P68104;Q05639;A0A087WVQ9 Q5VTE0 256 266 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.0036091 76.827 By MS/MS By MS/MS 1 1 3187300 2392200 795130 959 1029 1026 2239;2240 1853;1854 1854 2 IGPLGLSPK ATSALAPKIGPLGLSP GPLGLSPKKVGDDIAK K I G P K K 0 0 0 0 0 0 0 2 0 1 2 1 0 0 2 1 0 0 0 0 0 0 9 0 880.5382 P30050 P30050 32 40 RPL12 60S ribosomal protein L12 yes yes 2 0.0049119 73.666 By MS/MS 1 2461100 2461100 0 960 940 1027 2241 1855;1856 1855 1063 2 IGQQVDREPGDVATPPR RLCKQLEKIGQQVDRE GDVATPPRKRKKIVVE K I G P R K 1 2 0 2 0 2 1 2 0 1 0 0 0 0 3 0 1 0 0 2 0 0 17 1 1833.9333 H3BT22;Q9Y5N6 H3BT22 133 149 ORC6 Origin recognition complex subunit 6 yes no 3 0.00053584 80.102 By MS/MS By matching 1 1 4124200 2424700 1699600 961 664 1028 2242;2243 1857 1857 2051 1 IGSDPLAYEPK SPTMSRARIGSDPLAY DPLAYEPKEDLPVITI R I G P K E 1 0 0 1 0 0 1 1 0 1 1 1 0 0 2 1 0 0 1 0 0 0 11 0 1188.6027 P19634 P19634 701 711 SLC9A1 Sodium/hydrogen exchanger 1 yes yes 2 0.0071608 64.121 By matching By MS/MS 1 1 945050 393450 551590 962 915 1029 2244;2245 1858 1858 1038 1 IGTAEPDYGALYEGR INEEALEKIGTAEPDY YGALYEGRNPGFYVEA K I G G R N 2 1 0 1 0 0 2 3 0 1 1 0 0 0 1 0 1 0 2 0 0 0 15 0 1610.7577 P19174 P19174 764 778 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 2 9.5133E-05 92.247 By MS/MS By MS/MS 1 1 5676300 3133900 2542500 963 913 1030 2246;2247 1859;1860 1860 2401 2 IGTLHTSPDLK FVRKTTEKIGTLHTSP LHTSPDLKVRPELRGD K I G L K V 0 0 0 1 0 0 0 1 1 1 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1180.6452 Q9UPZ3 Q9UPZ3 557 567 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 2 0.011467 55.776 By matching By MS/MS 1 1 1525700 846030 679690 964 1486 1031 2248;2249 1861 1861 1799 1 IGYLGYCKGVEPKTECER ________________ EPKTECERLAGTESPV M I G E R L 0 1 0 0 2 0 3 3 0 1 1 2 0 0 1 0 1 0 2 1 0 0 18 2 2158.0187 G3V0E5 G3V0E5 2 19 TFRC yes yes 3 0.01765 43.791 By MS/MS 1 0 0 0 965 546 1032 2250 1862 1862 2349 1 IHHFIINNKDTFFSNATR TGPFSRARIHHFIINN TFFSNATRSRIVYHML R I H T R S 1 1 3 1 0 0 0 0 2 3 0 1 0 3 0 1 2 0 0 0 0 0 18 1 2174.1021 E9PQ79;Q9BYT9 E9PQ79 272 289 ANO3 Anoctamin;Anoctamin-3 yes no 3 0.012074 40.856 By MS/MS By matching 1 1 13004000 6924000 6079900 966 475 1033 2251;2252 1863 1863 561 1 IHLGSSPK NQGVSEERIHLGSSPK IHLGSSPKKGGNCDLS R I H P K K 0 0 0 0 0 0 0 1 1 1 1 1 0 0 1 2 0 0 0 0 0 0 8 0 837.47085 Q5JW53;Q9H410 Q5JW53 53 60 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.0097798 78.939 By matching By MS/MS 1 1 3756600 2097900 1658700 967 1160 1034 2253;2254 1864 1864 1353 1 IHRASDPGLPAEEPK GRFHLPPRIHRASDPG GLPAEEPKEKSSRKVA R I H P K E 2 1 0 1 0 0 2 1 1 1 1 1 0 0 3 1 0 0 0 0 0 0 15 1 1615.8318 F8VPD4;P27708 F8VPD4 1792 1806 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 3 0.001002 74.475 By MS/MS By MS/MS 1 1 19428000 9090200 10337000 968 509 1035 2255;2256 1865;1866 1866 601 2 IHRASDPGLPAEEPKEK GRFHLPPRIHRASDPG PAEEPKEKSSRKVAEP R I H E K S 2 1 0 1 0 0 3 1 1 1 1 2 0 0 3 1 0 0 0 0 0 0 17 2 1872.9694 F8VPD4;P27708 F8VPD4 1792 1808 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 3;4 0.0005223 73.252 By MS/MS By MS/MS 2 2 43663000 23939000 19724000 969 509 1036 2257;2258;2259;2260 1867;1868;1869;1870 1869 601 3 IHSPIPDMSK TSPSTATKIHSPIPDM SPIPDMSKFATGITPF K I H S K F 0 0 0 1 0 0 0 0 1 2 0 1 1 0 2 2 0 0 0 0 0 0 10 0 1123.5696 Q6NZY4 Q6NZY4 656 665 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 2 0.0036817 70.412 By MS/MS By MS/MS 2 2 11612000 6771000 4841400 970 1191 1037;1038 2261;2262;2263;2264 1871;1872 1872 214 1399 2 IIGEDSPSRLDR LYKGTITRIIGEDSPS DSPSRLDRGREDSLPK R I I D R G 0 2 0 2 0 0 1 1 0 2 1 0 0 0 1 2 0 0 0 0 0 0 12 1 1356.6997 C9J7T7;C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9JQE8 C9J7T7 794 805 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.0031222 78.556 By matching By MS/MS 1 1 3581600 1874700 1706900 971 313 1039 2265;2266 1873 1873 378 1 IIGEKSFR LCDFGFARIIGEKSFR IIGEKSFRRSVVGTPA R I I F R R 0 1 0 0 0 0 1 1 0 2 0 1 0 1 0 1 0 0 0 0 0 0 8 1 948.53927 B4DTS2;Q9BZL6;H0Y5M6;O94806;Q15139;F8WBA3 Q15139 733 740 PRKD2;PRKD3;PRKD1 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2;Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1 no no 2 0.016433 93.561 By MS/MS By MS/MS 1 1 6039900 3225200 2814800 972 1119;269 1040 2267;2268 1874;1875 1875 2 IILDLISESPIKGR DRVVECIKIILDLISE SESPIKGRAQPYDPNF K I I G R A 0 1 0 1 0 0 1 1 0 4 2 1 0 0 1 2 0 0 0 0 0 0 14 1 1552.9188 P61978;Q5T6W2 P61978 208 221 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.004591 63.624 By MS/MS By MS/MS 1 1 2671200 1424200 1247100 973 1018 1041 2269;2270 1876;1877 1876 1167 2 IISDMWGVLAKQQTHVR VFVAIVRKIISDMWGV AKQQTHVRKHQFDHGE K I I V R K 1 1 0 1 0 2 0 1 1 2 1 1 1 0 0 1 1 1 0 2 0 0 17 1 1981.0568 A0A1B0GW05;Q2PZI1 A0A1B0GW05 499 515 DPY19L1 Probable C-mannosyltransferase DPY19L1 yes no 3 0.018673 40.237 By MS/MS 1 0 0 0 974 219 1042 2271 1878 1878 36 1 IISFLYSTVGALNK IGDENFNKIISFLYST STVGALNKIGTDGTQV K I I N K I 1 0 1 0 0 0 0 1 0 2 2 1 0 1 0 2 1 0 1 1 0 0 14 0 1524.8552 Q05707;A0A0A0MQT7 Q05707 1051 1064 COL14A1 Collagen alpha-1(XIV) chain yes no 2 1.3529E-12 112.83 By MS/MS By MS/MS 1 1 4078900 2416600 1662200 975 1053 1043 2272;2273 1879;1880 1879 2 IISNASCTTNCLAPLAK EKYDNSLKIISNASCT NCLAPLAKVIHDNFGI K I I A K V 3 0 2 0 2 0 0 0 0 2 2 1 0 0 1 2 2 0 0 0 0 0 17 0 1832.9125 P04406;E7EUT5 P04406 146 162 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 7.8409E-11 103.21 By MS/MS By matching 1 1 5231400 3195900 2035500 976 851 1044 2274;2275 1881 1881 1 IIYDSDSESEETLQVK KQPSKKKRIIYDSDSE SEETLQVKNAKKPPEK R I I V K N 0 0 0 2 0 1 3 0 0 2 1 1 0 0 0 3 1 0 1 1 0 0 16 0 1854.8735 P35251;D6RAD2;E0CX09 P35251 65 80 RFC1 Replication factor C subunit 1 yes no 2 0.003482 77.192 By MS/MS 1 1150400 1150400 0 977 947 1045 2276 1882 1882 1065;2408 1 IIYNLFHK SAEDKSYRIIYNLFHK IIYNLFHKTVPEFKYR R I I H K T 0 0 1 0 0 0 0 0 1 2 1 1 0 1 0 0 0 0 1 0 0 0 8 0 1046.5913 H7C5K7;C9JXM5;G5E9W1;Q7Z3E1 H7C5K7 179 186 TIPARP TCDD-inducible poly [ADP-ribose] polymerase yes no 2 0.0092745 60.961 By MS/MS 1 0 0 0 978 345 1046 2277 1883 1883 2316 1 IIYRPVAGGESR PGRVLRYRIIYRPVAG PVAGGESREVTTPPNQ R I I S R E 1 2 0 0 0 0 1 2 0 2 0 0 0 0 1 1 0 0 1 1 0 0 12 1 1316.7201 D6RGG3;Q99715 D6RGG3 755 766 COL12A1 Collagen alpha-1(XII) chain yes no 3 0.0034713 55.261 By MS/MS 1 300200 300200 0 979 379 1047 2278 1884 1884 1 IKGSGGWTLTRR YLPWLEKRIKGSGGWT GGWTLTRRIEDLWELH R I K R R I 0 2 0 0 0 0 0 3 0 1 1 1 0 0 0 1 2 1 0 0 0 0 12 2 1330.747 Q99489 Q99489 154 165 DDO D-aspartate oxidase yes yes 2 0.0078425 47.706 By MS/MS By matching 1 1 901170 446420 454750 980 1354 1048 2279;2280 1885 1885 2209;2210 1 IKKMTLNPPNPSK I K S K 0 0 2 0 0 0 0 0 0 1 1 3 1 0 3 1 1 0 0 0 0 0 13 2 1466.8279 REV__P51532 yes no 2 0.004779 47.606 By MS/MS By matching 1 1 16944000 8497200 8446500 + 981 1523 1049 2281;2282 1886 1886 1866;2250 1 IKNENTEGSPQEDGVELEGLK AEKKNKKKIKNENTEG GVELEGLKQRLEKKQK K I K L K Q 0 0 2 1 0 1 5 3 0 1 2 2 0 0 1 1 1 0 0 1 0 0 21 1 2285.1023 P11388 P11388 1239 1259 TOP2A DNA topoisomerase 2-alpha yes yes 3 7.7967E-10 85.231 By MS/MS By MS/MS 1 2 21491000 12423000 9067500 982 888 1050 2283;2284;2285 1887;1888 1888 1011 2 IKNMATTTPR NARDNLNRIKNMATTT NMATTTPRKTIFPNLI R I K P R K 1 1 1 0 0 0 0 0 0 1 0 1 1 0 1 0 3 0 0 0 0 0 10 1 1131.607 Q8N456 Q8N456 224 233 LRRC18 Leucine-rich repeat-containing protein 18 yes yes 2 0.0056025 65.465 By MS/MS By matching 1 1 5116600 2979600 2136900 983 1255 1051 2286;2287 1889 1889 2190;2191 1 IKTEPSSPLSDPSDIIR ASPVTEVRIKTEPSSP SDPSDIIRVTVGDAAT R I K I R V 0 1 0 2 0 0 1 0 0 3 1 1 0 0 3 4 1 0 0 0 0 0 17 1 1853.9735 Q9ULJ3 Q9ULJ3 429 445 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2 0.010647 52.071 By MS/MS By matching 1 1 2908700 1694200 1214500 984 1472 1052 2288;2289 1890 1890 1781;1782 1 ILATDVSSKNTPDSK QAHEVHQKILATDVSS SKNTPDSKKISSRNIN K I L S K K 1 0 1 2 0 0 0 0 0 1 1 2 0 0 1 3 2 0 0 1 0 0 15 1 1574.8152 H0Y8J2;Q03188 H0Y8J2 27 41 CENPC Centromere protein C yes no 2;3 2.1077E-13 119.96 By MS/MS By MS/MS 2 2 6066100 3753800 2312300 985 601 1053 2290;2291;2292;2293 1891;1892;1893 1892 720;2037 3 ILDEEVFEGDIQQLLFVSDHR GIIVFGTRILDEEVFE LLFVSDHRAAYDYCEH R I L H R A 0 1 0 3 0 2 3 1 1 2 3 0 0 2 0 1 0 0 0 2 0 0 21 0 2501.2438 A0A087WXW9;P20908 A0A087WXW9 211 231 COL5A1 Collagen alpha-1(V) chain yes no 3 4.3769E-18 100.67 By MS/MS By MS/MS 1 1 4710600 2805700 1904900 986 53 1054 2294;2295 1894;1895 1894 2 ILELSTQAR TSHEHRERILELSTQA LELSTQARMELQQLIS R I L A R M 1 1 0 0 0 1 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1029.5819 Q9UBT7 Q9UBT7 346 354 CTNNAL1 Alpha-catulin yes yes 2 0.0056325 91.658 By MS/MS 1 508950 508950 0 987 1451 1055 2296 1896 1896 2228 1 ILELTPEPDRPR LIQHQDMRILELTPEP TPEPDRPRILPPDQRP R I L P R I 0 2 0 1 0 0 2 0 0 1 2 0 0 0 3 0 1 0 0 0 0 0 12 1 1434.7831 Q14004 Q14004 1242 1253 CDK13 Cyclin-dependent kinase 13 yes yes 2 0.00023458 101.89 By MS/MS By MS/MS 1 1 7482900 3781500 3701400 988 1091 1056 2297;2298 1897;1898 1897 2151 2 ILEQQNSSRTLEK ANWEAQQRILEQQNSS NSSRTLEKNKKKGKIF R I L E K N 0 1 1 0 0 2 2 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 13 1 1544.8158 G3V1Q4;E7ES33;E7EPK1;Q16181;Q5JXL7 G3V1Q4 381 393 SEPT7;DKFZp586I031 Septin-7 yes no 2;3 0.0030224 70.889 By MS/MS By MS/MS 3 3 81723000 50173000 31550000 989 405 1057;1058 2299;2300;2301;2302;2303;2304 1899;1900;1901;1902 1902 455;456;1977 4 ILEQQNSSRTLEKNK ANWEAQQRILEQQNSS SRTLEKNKKKGKIF__ R I L N K K 0 1 2 0 0 2 2 0 0 1 2 2 0 0 0 2 1 0 0 0 0 0 15 2 1786.9537 G3V1Q4;E7ES33;E7EPK1;Q16181;Q5JXL7 G3V1Q4 381 395 SEPT7;DKFZp586I031 Septin-7 yes no 3 0.0044049 57.267 By MS/MS By matching 1 1 6260700 3791600 2469100 990 405 1059 2305;2306 1903 1903 455;456;1977 1 ILFIFIDSDHTDNQR AAESFKGKILFIFIDS SDHTDNQRILEFFGLK K I L Q R I 0 1 1 3 0 1 0 0 1 3 1 0 0 2 0 1 1 0 0 0 0 0 15 0 1832.9057 I3L4M2;I3L398;H0Y3Z3;H7BZ94;P07237 I3L4M2 89 103 P4HB Protein disulfide-isomerase yes no 2;3 1.1393E-08 126.09 By MS/MS By MS/MS 2 2 5080200 3373600 1706600 991 583 1060 2307;2308;2309;2310 1904;1905;1906 1905 3 ILGDMQPGDYFDLVLFGTR QTKEALLKILGDMQPG DLVLFGTRVQSWKGSL K I L T R V 0 1 0 3 0 1 0 3 0 1 3 0 1 2 1 0 1 0 1 1 0 0 19 0 2156.0612 P19827 P19827 318 336 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes yes 2 8.6721E-10 94.09 By matching By MS/MS 1 1 16177000 10227000 5950200 992 917 1061 2311;2312 1907 1907 159 1 ILGSASPEEEQEKPILDRPTR EYAEARKRILGSASPE PILDRPTRISQPEDSR R I L T R I 1 2 0 1 0 1 4 1 0 2 2 1 0 0 3 2 1 0 0 0 0 0 21 2 2364.2285 Q7Z422 Q7Z422 102 122 SZRD1 SUZ domain-containing protein 1 yes yes 3 0.0028854 48.314 By MS/MS 1 4857500 4857500 0 993 1220 1062 2313 1908 1908 2184 1 ILITIVEEVETLR VTVEKVIKILITIVEE VEEVETLRQERLSFSG K I L L R Q 0 1 0 0 0 0 3 0 0 3 2 0 0 0 0 0 2 0 0 2 0 0 13 0 1526.892 Q15149 Q15149 3424 3436 PLEC Plectin yes yes 2 3.5387E-09 127.83 By MS/MS 1 1703800 0 1703800 994 1120 1063 2314 1909 1909 1 ILKSPEIQR MINTDLSRILKSPEIQ LKSPEIQRALRAPRKK R I L Q R A 0 1 0 0 0 1 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1082.6448 H3BM89;P36578 H3BM89 198 206 RPL4 60S ribosomal protein L4 yes no 2;3 0.0018903 92.943 By MS/MS By MS/MS 2 2 15593000 10634000 4959200 995 634 1064 2315;2316;2317;2318 1910;1911;1912 1911 753 3 ILLAELEQLK RFLEQQNKILLAELEQ LAELEQLKGQGKSRLG K I L L K G 1 0 0 0 0 1 2 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 10 0 1168.7067 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0 P08670 130 139 VIM Vimentin yes no 2 0.00108 88.819 By MS/MS 1 1796500 1796500 0 996 874 1065 2319 1913 1913 1 ILLAELEQLKGQGK RFLEQQNKILLAELEQ EQLKGQGKSRLGDLYE K I L G K S 1 0 0 0 0 2 2 2 0 1 4 2 0 0 0 0 0 0 0 0 0 0 14 1 1538.9032 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0 P08670 130 143 VIM Vimentin yes no 2;3 0.00075905 81.709 By MS/MS By matching 2 1 1172700 859760 312950 997 874 1066 2320;2321;2322 1914;1915 1914 2 ILLVDSPGMGNADDEQQEEGTSSK KPTHEDSKILLVDSPG QEEGTSSKQVVKQGLQ K I L S K Q 1 0 1 3 0 2 3 3 0 1 2 1 1 0 1 3 1 0 0 1 0 0 24 0 2519.1333 Q9UKN8 Q9UKN8 606 629 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3 0.00054665 51.783 By matching By MS/MS 1 1 6240000 3564100 2675900 998 1467 1067 2323;2324 1916 1916 251 1777 1 ILNNGHAFNVEFDDSQDK YDQATSLRILNNGHAF EFDDSQDKAVLKGGPL R I L D K A 1 0 3 3 0 1 1 1 1 1 1 1 0 2 0 1 0 0 0 1 0 0 18 0 2061.9392 P00918;E5RID5;E5RK37 P00918 59 76 CA2 Carbonic anhydrase 2 yes no 3 0.015719 37.438 By MS/MS By matching 1 1 719460 476190 243270 999 833 1068 2325;2326 1917 1917 1 ILQEKLDQPVSAPPSPR DKLEAEKRILQEKLDQ VSAPPSPRDISMEIDS R I L P R D 1 1 0 1 0 2 1 0 0 1 2 1 0 0 4 2 0 0 0 1 0 0 17 1 1874.0262 Q16204 Q16204 230 246 CCDC6 Coiled-coil domain-containing protein 6 yes yes 3 0.0042863 53.454 By MS/MS By MS/MS 2 2 4087100 1996300 2090800 1000 1135 1069;1070 2327;2328;2329;2330 1918;1919 1919 1323;1324 2 ILSQSTDSLNMR ESPLGLRRILSQSTDS STDSLNMRNRTLS___ R I L M R N 0 1 1 1 0 1 0 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 12 0 1363.6766 V9GYF5;V9GYG5;V9GZ14;V9GYM8;Q92974 V9GYF5 162 173 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 4.6439E-10 132.14 By MS/MS By MS/MS 2 2 12777000 6983900 5792900 1001 1318 1071;1072 2331;2332;2333;2334 1920;1921;1922;1923 1923 228 1554 4 ILVPKSPVK DLAKSGIKILVPKSPV LVPKSPVKSRTAVDGF K I L V K S 0 0 0 0 0 0 0 0 0 1 1 2 0 0 2 1 0 0 0 2 0 0 9 1 979.643 Q9Y232 Q9Y232 196 204 CDYL Chromodomain Y-like protein yes yes 2 0.0022004 110.64 By MS/MS By MS/MS 1 1 15532000 8170700 7361000 1002 1493 1073 2335;2336 1924;1925 1924 1823 2 ILVPKSPVKSR DLAKSGIKILVPKSPV PKSPVKSRTAVDGFQS K I L S R T 0 1 0 0 0 0 0 0 0 1 1 2 0 0 2 2 0 0 0 2 0 0 11 2 1222.7761 Q9Y232 Q9Y232 196 206 CDYL Chromodomain Y-like protein yes yes 3 0.013524 63.624 By MS/MS 1 551630 0 551630 1003 1493 1074 2337 1926 1926 1823 1 ILYHGYSLLYVQGNER PQCPSGTKILYHGYSL LYVQGNERAHGQDLGT K I L E R A 0 1 1 0 0 1 1 2 1 1 3 0 0 0 0 1 0 0 3 1 0 0 16 0 1923.9843 P02462 P02462 1466 1481 COL4A1 Collagen alpha-1(IV) chain;Arresten yes yes 3 0.0015726 54.7 By MS/MS By matching 1 1 1226500 864130 362380 1004 842 1075 2338;2339 1927 1927 1 IMATPEQVGK RKMPFTEKIMATPEQV ATPEQVGKMKAIVEKL K I M G K M 1 0 0 0 0 1 1 1 0 1 0 1 1 0 1 0 1 0 0 1 0 0 10 0 1072.5587 B1AHC9;P12956 B1AHC9 402 411 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.014985 53.08 By MS/MS 1 0 0 0 1005 249 1076 2340 1928 1928 42 1 IMGPNYTPGKK VSTGLKVRIMGPNYTP PNYTPGKKEDLYLKPI R I M K K E 0 0 1 0 0 0 0 2 0 1 0 2 1 0 2 0 1 0 1 0 0 0 11 1 1204.6274 P13639 P13639 429 439 EEF2 Elongation factor 2 yes yes 2 0.0023712 65.295 By MS/MS By matching 1 1 4014200 3161500 852690 1006 896 1077 2341;2342 1929 1929 156 2109 1 IMSCSPDTQCSR LLKKQVVRIMSCSPDT SPDTQCSRDHSMEDPD R I M S R D 0 1 0 1 2 1 0 0 0 1 0 0 1 0 1 3 1 0 0 0 0 0 12 0 1440.5796 K7EQ12;Q9C0C9 K7EQ12 157 168 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 2 0.0026979 72.29 By matching By MS/MS 1 1 1140900 499520 641380 1007 735 1078 2343;2344 1930 1930 855 1 INEFSISSFCTVVDVVNFSK NLYLQGNRINEFSISS VDVVNFSKLQVLRLDG R I N S K L 0 0 2 1 1 0 1 0 0 2 0 1 0 3 0 4 1 0 0 4 0 0 20 0 2291.1144 Q06828 Q06828 325 344 FMOD Fibromodulin yes yes 2 9.7988E-11 93.909 By MS/MS By MS/MS 1 1 10718000 8835100 1882600 1008 1056 1079 2345;2346 1931;1932 1931 2 INLLKNIDEK REITDKKKINLLKNID LLKNIDEKLTEAAREL K I N E K L 0 0 2 1 0 0 1 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 10 1 1198.6921 Q9NWY4 Q9NWY4 182 191 C4orf27 UPF0609 protein C4orf27 yes yes 2 0.0025953 78.334 By MS/MS 1 574740 574740 0 1009 1435 1080 2347 1933 1933 1 INNVIDNLIVAPGTFEVQIEEVR SILSLVTKINNVIDNL EVQIEEVRQVGSYKKG K I N V R Q 1 1 3 1 0 1 3 1 0 4 1 0 0 1 1 0 1 0 0 4 0 0 23 0 2581.3752 X6R6Z1;A0A0A0MRL0;B4DY09;Q12905 X6R6Z1 43 65 ILF2 Interleukin enhancer-binding factor 2 yes no 3 0.00070166 53.96 By MS/MS 1 2783000 0 2783000 1010 103 1081 2348 1934 1934 1 INPPSSGGTSSSPIK NRRQKEKRINPPSSGG GTSSSPIKAIFPSPTS R I N I K A 0 0 1 0 0 0 0 2 0 2 0 1 0 0 3 5 1 0 0 0 0 0 15 0 1427.7256 A0A0C4DG88;P14859;A0A0A0MT46 A0A0C4DG88 345 359 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 2 0.006381 65.219 By MS/MS By MS/MS 1 2 6792100 3505100 3287000 1011 150 1082 2349;2350;2351 1935;1936;1937 1936 186;1930 3 INSDDSNLYLTASK RRIGDVVRINSDDSNL NLYLTASKKKPTCC__ R I N S K K 1 0 2 2 0 0 0 0 0 1 2 1 0 0 0 3 1 0 1 0 0 0 14 0 1539.7417 C9JY26;Q9BZG1 C9JY26 239 252 RAB34 Ras-related protein Rab-34 yes no 2 0.0030339 71.888 By matching By MS/MS 1 1 2346900 1286000 1061000 1012 346 1083 2352;2353 1938 1938 2317 1 INTQWLLTSGTTEANAWK YVGGAEARINTQWLLT TTEANAWKSTLVGHDT R I N W K S 2 0 2 0 0 1 1 1 0 1 2 1 0 0 0 1 4 2 0 0 0 0 18 0 2033.0218 CON__Streptavidin CON__Streptavidin 105 122 yes yes 2;3 4.6414E-33 134.93 By MS/MS By MS/MS 2 2 20820000 15496000 5324700 + 1013 359 1084 2354;2355;2356;2357 1939;1940 1939 2 INTQWLLTSGTTEANAWKSTLVGHDTFTK YVGGAEARINTQWLLT VGHDTFTKVKPSAASI R I N T K V 2 0 2 1 0 1 1 2 1 1 3 2 0 1 0 2 7 2 0 1 0 0 29 1 3219.62 CON__Streptavidin CON__Streptavidin 105 133 yes yes 4 7.076E-59 115.58 By MS/MS By MS/MS 1 1 27962000 11567000 16394000 + 1014 359 1085 2358;2359 1941;1942 1942 2 IPAKLSPTQLR SGQETFWRIPAKLSPT KLSPTQLRRAAASLSQ R I P L R R 1 1 0 0 0 1 0 0 0 1 2 1 0 0 2 1 1 0 0 0 0 0 11 1 1222.7398 Q9UNS1 Q9UNS1 1082 1092 TIMELESS Protein timeless homolog yes yes 2 0.019632 61.235 By matching By MS/MS 1 1 1504400 867510 636920 1015 1480 1086 2360;2361 1943 1943 0 IPNYQLSPTKLPSINK SNTLAKMRIPNYQLSP TKLPSINKSKDRASQQ R I P N K S 0 0 2 0 0 1 0 0 0 2 2 2 0 0 3 2 1 0 1 0 0 0 16 1 1812.0145 A0A0C4DG07;O60934 A0A0C4DG07 344 359 NBN Nibrin yes no 3 0.0012198 66.201 By MS/MS By matching 1 1 3214400 1477500 1736900 1016 145 1087 2362;2363 1944;1945 1944 182 2 IPSEMPSPNFGK DTSLIHGKIPSEMPSP MPSPNFGKNIYRKQSG K I P G K N 0 0 1 0 0 0 1 1 0 1 0 1 1 1 3 2 0 0 0 0 0 0 12 0 1302.6278 Q9H2J7 Q9H2J7 681 692 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.00076151 86.467 By MS/MS By MS/MS 1 1 3929400 1904700 2024700 1017 1395 1088 2364;2365 1946;1947 1947 1681 2 IPSPNILK SPNPRSVRIPSPNILK IPSPNILKTGLTENVD R I P L K T 0 0 1 0 0 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 0 0 8 0 880.5382 Q5VUA4 Q5VUA4 2099 2106 ZNF318 Zinc finger protein 318 yes yes 2 0.0096294 95.483 By matching By MS/MS 1 1 1077500 558470 519040 1018 1177 1089 2366;2367 1948 1948 1387 1 IPVEGPLSPSR GNNPIFPRIPVEGPLS EGPLSPSRGDFPKGIP R I P S R G 0 1 0 0 0 0 1 1 0 1 1 0 0 0 3 2 0 0 0 1 0 0 11 0 1150.6346 O00512 O00512 680 690 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 0.017891 52.495 By matching By MS/MS 1 1 1808400 871690 936740 1019 756 1090 2368;2369 1949 1949 1 IQAIELEDLLR ELHLDHNKIQAIELED IELEDLLRYSKLYRLG K I Q L R Y 1 1 0 1 0 1 2 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1311.7398 P21810 P21810 241 251 BGN Biglycan yes yes 2 2.1339E-05 121.83 By matching By MS/MS 1 1 9626300 6085900 3540400 1020 921 1091 2370;2371 1950 1950 1 IQDPTEDAEAEDTPR KKRNHTKRIQDPTEDA AEAEDTPRKRLRTDKH R I Q P R K 2 1 0 3 0 1 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 0 15 0 1685.738 H0Y9L4;O96028 H0Y9L4 126 140 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2 0.0065107 78.326 By matching By MS/MS 1 1 1823900 936040 887830 1021 603 1092 2372;2373 1951 1951 2038 1 IQELGDLYTPAPGR IRSEQRPRIQELGDLY LYTPAPGRAESGPEKP R I Q G R A 1 1 0 1 0 1 1 2 0 1 2 0 0 0 2 0 1 0 1 0 0 0 14 0 1528.7886 M0R2P8;M0R3A4;M0QYA2;Q9NWS0 M0R2P8 68 81 PIH1D1 PIH1 domain-containing protein 1 yes no 2 0.0050825 80.979 By MS/MS 1 397970 397970 0 1022 743 1093 2374 1952 1952 2071 1 IQIISTDSAVASPQR ________________ SAVASPQRIQGSEPAS R I Q Q R I 2 1 0 1 0 2 0 0 0 3 0 0 0 0 1 3 1 0 0 1 0 0 15 0 1584.8471 C9JKS0;P49116;C9J2Y1;C9JMI6 C9JKS0 8 22 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.0058617 53.981 By MS/MS By MS/MS 1 2 2888300 1402400 1485800 1023 334 1094;1095 2375;2376;2377 1953;1954 1953 397;1961 1 IQQFDDGGSDEEDIWEEK FEACCKERIQQFDDGG EEDIWEEKHIAFTPES R I Q E K H 0 0 0 4 0 2 4 2 0 2 0 1 0 1 0 1 0 1 0 0 0 0 18 0 2138.8916 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 316 333 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 3 0.0034838 51.487 By MS/MS By matching 1 1 2672000 1423900 1248100 1024 459 1096 2378;2379 1955 1955 543 1 ISEGLPTPTK SPLKSPYKISEGLPTP EGLPTPTKMTPRSRIL K I S T K M 0 0 0 0 0 0 1 1 0 1 1 1 0 0 2 1 2 0 0 0 0 0 10 0 1041.5706 P06400 P06400 815 824 RB1 Retinoblastoma-associated protein yes yes 2 0.00041881 117.09 By MS/MS By matching 1 1 845370 690490 154880 1025 858 1097 2380;2381 1956 1956 2098 1 ISEQFTAMFR AIQELFKRISEQFTAM EQFTAMFRRKAFLHWY R I S F R R 1 1 0 0 0 1 1 0 0 1 0 0 1 2 0 1 1 0 0 0 0 0 10 0 1228.591 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A0B4J269;P68371;Q13509;P04350 Q5JP53 363 372 TUBB;TUBB2B;TUBB2A;TUBB3;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-4A chain yes no 2 0.006715 57.859 By MS/MS 1 0 0 0 1026 864 1098 2382 1957 1957 139 1 ISFVEEDVHPK PQRLKETRISFVEEDV VEEDVHPKWIPGAADD R I S P K W 0 0 0 1 0 0 2 0 1 1 0 1 0 1 1 1 0 0 0 2 0 0 11 0 1298.6507 Q8WYP5 Q8WYP5 1231 1241 AHCTF1 Protein ELYS yes yes 2 0.014935 54.005 By matching By MS/MS 1 1 1698300 964220 734070 1027 1297 1099 2383;2384 1958 1958 1 ISGLIYEETR ARRGGVKRISGLIYEE GLIYEETRGVLKVFLE R I S T R G 0 1 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1179.6136 P62805 P62805 47 56 HIST1H4A Histone H4 yes yes 2 0.00023041 98.033 By MS/MS By MS/MS 1 1 6193500 4372300 1821200 1028 1025 1100 2385;2386 1959;1960 1959 2 ISKLEVTEIVKPSPK DFESSSMKISKLEVTE EIVKPSPKRKMEPDTE K I S P K R 0 0 0 0 0 0 2 0 0 2 1 3 0 0 2 2 1 0 0 2 0 0 15 2 1666.9869 Q7Z6E9 Q7Z6E9 1167 1181 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 3 0.019137 49.089 By matching By MS/MS 1 1 1962900 1159700 803210 1029 1225 1101 2387;2388 1961 1961 1439 1 ISLSKSPTKTDPK KLAKPMEKISLSKSPT SPTKTDPKNEEEEKRR K I S P K N 0 0 0 1 0 0 0 0 0 1 1 3 0 0 2 3 2 0 0 0 0 0 13 2 1400.7875 A0A0A0MRN4;Q5BKZ1 A0A0A0MRN4 176 188 ZNF326 DBIRD complex subunit ZNF326 yes no 2;3 0.0020413 88.78 By MS/MS By MS/MS 2 1 20416000 17798000 2617700 1030 107 1102 2389;2390;2391 1962;1963 1963 133;1916 2 ISNIPDEYFK TLYLDNNKISNIPDEY NIPDEYFKRFNALQYL K I S F K R 0 0 1 1 0 0 1 0 0 2 0 1 0 1 1 1 0 0 1 0 0 0 10 0 1224.6027 P51884;CON__Q05443 P51884 217 226 LUM Lumican yes no 2 0.01581 64.04 By MS/MS By matching 1 1 1412900 1073500 339350 1031 996 1103 2392;2393 1964 1964 1 ISNYGWDQSDK ITTGYTVKISNYGWDQ YGWDQSDKFVKIYITL K I S D K F 0 0 1 2 0 1 0 1 0 1 0 1 0 0 0 2 0 1 1 0 0 0 11 0 1311.5731 Q9HB71 Q9HB71 75 85 CACYBP Calcyclin-binding protein yes yes 2 0.010075 66.92 By matching By MS/MS 1 1 459830 219620 240210 1032 1408 1104 2394;2395 1965 1965 1 ISSKSPGHMVILDQTK KKSEEKKRISSKSPGH MVILDQTKGDHCRPSR R I S T K G 0 0 0 1 0 1 0 1 1 2 1 2 1 0 1 3 1 0 0 1 0 0 16 1 1739.924 Q9NWH9 Q9NWH9 549 564 SLTM SAFB-like transcription modulator yes yes 3 0.0011469 81.448 By MS/MS By MS/MS 2 2 7250100 4422700 2827400 1033 1433 1105;1106 2396;2397;2398;2399 1966;1967;1968 1966 247 1741;1742 3 ISSTPTTETIR KSTRRSGRISSTPTTE TPTTETIRGIDSDDVQ R I S I R G 0 1 0 0 0 0 1 0 0 2 0 0 0 0 1 2 4 0 0 0 0 0 11 0 1204.6299 A0A075B754;Q96QE3 A0A075B754 600 610 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.015789 53.569 By matching By MS/MS 1 1 900760 504990 395770 1034 9 1107 2400;2401 1969 1969 1 ISTASQVSQGTGSPVPK STGSPTNKISTASQVS GTGSPVPKIHGSSFVT K I S P K I 1 0 0 0 0 2 0 2 0 1 0 1 0 0 2 4 2 0 0 2 0 0 17 0 1642.8526 Q9ULM3 Q9ULM3 524 540 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0002768 82.121 By matching By MS/MS 1 1 4218600 2304800 1913800 1035 1474 1108 2402;2403 1970 1970 1783 1 ISYIPDEEVSSPSPPQR QFENYSFKISYIPDEE SSPSPPQRAQRGDHSS K I S Q R A 0 1 0 1 0 1 2 0 0 2 0 0 0 0 4 4 0 0 1 1 0 0 17 0 1899.9214 F8W930;Q9Y6M1 F8W930 158 174 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 yes no 2 0.0017635 61.732 By MS/MS 1 1504300 1504300 0 1036 531 1109 2404 1971 1971 619 1 ITEGVPQLLIVLTADR LVSSAGSRITEGVPQL LIVLTADRSGDDVRNP R I T D R S 1 1 0 1 0 1 1 1 0 2 3 0 0 0 1 0 2 0 0 2 0 0 16 0 1737.0036 E7ENL6;P12111 E7ENL6 521 536 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 3.6101E-19 117.03 By MS/MS By MS/MS 1 2 9920700 6426700 3494000 1037 403 1110 2405;2406;2407 1972;1973;1974 1972 3 ITFELVYEELLK VSVAPNAKITFELVYE LVYEELLKRRLGVYEL K I T L K R 0 0 0 0 0 0 3 0 0 1 3 1 0 1 0 0 1 0 1 1 0 0 12 0 1495.8174 H7C0L5;B7ZKJ8;Q14624 H7C0L5 10 21 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 1.1882E-08 117.02 By MS/MS By MS/MS 1 1 5334400 3474200 1860100 1038 296 1111 2408;2409 1975;1976 1975 2 ITPPAAKPGSPQAK SMVQKSPRITPPAAKP KPGSPQAKSLQPAVAE R I T A K S 3 0 0 0 0 1 0 1 0 1 0 2 0 0 4 1 1 0 0 0 0 0 14 1 1361.7667 P35658;A0A0A0MSW3 P35658 669 682 NUP214 Nuclear pore complex protein Nup214 yes no 2 3.0789E-13 124.16 By MS/MS By MS/MS 1 1 5008000 3064600 1943400 1039 952 1112 2410;2411 1977;1978 1977 1069 2 ITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNR ADEAQVQKITQDYGQD AFTHSTNRMWRKTRSH K I T N R M 4 1 2 5 0 2 1 2 1 4 3 0 0 4 1 1 6 0 1 1 0 0 39 0 4330.107 S4R433;C9JUZ4;C9JUF9;P15085 S4R433 48 86 CPA1 Carboxypeptidase A1 yes no 3 0.0089856 37.357 By MS/MS 1 51739000 0 51739000 1040 342 1113 2412 1979 1979 1 ITVQASPNLDK LPSDFQHKITVQASPN QASPNLDKRRSLNSSS K I T D K R 1 0 1 1 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 11 0 1184.6401 Q5TCX8 Q5TCX8 523 533 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 yes yes 2 0.0084831 61.48 By matching By MS/MS 1 1 965050 645990 319060 1041 1172 1114 2413;2414 1980 1980 1377 1 IVADKDYSVTANSK SLFLQTPKIVADKDYS YSVTANSKIVVVTAGV K I V S K I 2 0 1 2 0 0 0 0 0 1 0 2 0 0 0 2 1 0 1 2 0 0 14 1 1509.7675 A8MW50;P07195;F5H793;C9J7H8 A8MW50 78 91 LDHB L-lactate dehydrogenase;L-lactate dehydrogenase B chain yes no 3 0.0014347 62.035 By MS/MS By matching 1 1 1476500 905750 570730 1042 243 1115 2415;2416 1981 1981 1 IVAHAVEVPAVQSPR RKPIVLKRIVAHAVEV VPAVQSPRRSPRISFF R I V P R R 3 1 0 0 0 1 1 0 1 1 0 0 0 0 2 1 0 0 0 4 0 0 15 0 1571.8784 B5MBX0;Q96FF9;H0YCL8 B5MBX0 63 77 CDCA5 Sororin yes no 2;3 2.1302E-08 104.41 By MS/MS By MS/MS 2 2 7251300 3889000 3362300 1043 274 1116 2417;2418;2419;2420 1982;1983;1984;1985 1984 340 4 IVEPEVVGESDSEVEGDAWR ERLARHRKIVEPEVVG EVEGDAWRMEREDSSE K I V W R M 1 1 0 2 0 0 5 2 0 1 0 0 0 0 1 2 0 1 0 4 0 0 20 0 2201.0124 P55081 P55081 107 126 MFAP1 Microfibrillar-associated protein 1 yes yes 2 1.5434E-09 90.422 By MS/MS By matching 1 1 8278200 5536000 2742300 1044 1010 1117 2421;2422 1986 1986 1158 1 IVEVFDIGPK TVRSFISRIVEVFDIG EVFDIGPKRVQIALAQ R I V P K R 0 0 0 1 0 0 1 1 0 2 0 1 0 1 1 0 0 0 0 2 0 0 10 0 1115.6227 D6RGG3;Q99715;A0A087X0A8 D6RGG3 1225 1234 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.01581 64.04 By MS/MS By matching 2 1 972890 817480 155410 1045 379 1118 2423;2424;2425 1987 1987 1 IVEYSPPSAPR ALPEPKVRIVEYSPPS YSPPSAPRRPPVYYKF R I V P R R 1 1 0 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 1 0 0 11 0 1214.6295 O95696 O95696 124 134 BRD1 Bromodomain-containing protein 1 yes yes 2 9.4605E-06 103.44 By MS/MS By MS/MS 1 1 2626700 1576900 1049900 1046 824 1119 2426;2427 1988;1989;1990;1991 1989 974 4 IVNREKLSESVLMK TCQKVAIKIVNREKLS LSESVLMKVEREIAIL K I V M K V 0 1 1 0 0 0 2 0 0 1 2 2 1 0 0 2 0 0 0 2 0 0 14 2 1644.9233 Q8IWQ3;Q8TDC3;K7EN26 Q8IWQ3 49 62 BRSK2;BRSK1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 yes no 2 0.0049394 50.108 By MS/MS 1 436270 0 436270 1047 1242 1120 2428 1992 1992 221 1464;1465 1 IVPQSQVPNPESPGK QPIASSCKIVPQSQVP PNPESPGKSFQPITMS K I V G K S 0 0 1 0 0 2 1 1 0 1 0 1 0 0 4 2 0 0 0 2 0 0 15 0 1575.8257 Q9ULM3 Q9ULM3 436 450 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0020544 58.723 By MS/MS By matching 1 1 2231300 1238500 992810 1048 1474 1121 2429;2430 1993 1993 1784 1 IVRGDQPAASGDSDDDEPPPLPR LCIFLLYKIVRGDQPA DEPPPLPRLKRRDFTP K I V P R L 2 2 0 5 0 1 1 2 0 1 1 0 0 0 5 2 0 0 0 1 0 0 23 1 2403.1302 O00264 O00264 45 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 3.3075E-16 91.964 By MS/MS By MS/MS 1 1 10196000 6821800 3374300 1049 752 1122 2431;2432 1994;1995;1996 1994 871;872 3 IVSGSPISTPSPSPLPR QPITMSCKIVSGSPIS PSPSPLPRTPTSTPVH K I V P R T 0 1 0 0 0 0 0 1 0 2 1 0 0 0 5 5 1 0 0 1 0 0 17 0 1690.9254 Q9ULM3 Q9ULM3 461 477 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.01344 45.33 By matching By MS/MS 1 1 709480 418840 290640 1050 1474 1123 2433;2434 1997 1997 1 IVVVTAGVR YSVTANSKIVVVTAGV VVVTAGVRQQEGESRL K I V V R Q 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 4 0 0 9 0 912.57565 A8MW50;P07195;F5H793;C9J7H8 A8MW50 92 100 LDHB L-lactate dehydrogenase;L-lactate dehydrogenase B chain yes no 2 0.016506 67.981 By MS/MS 1 495540 495540 0 1051 243 1124 2435 1998 1998 1 IWEERVSLTK EFQHKLVRIWEERVSL EERVSLTKLREKVTRE R I W T K L 0 1 0 0 0 0 2 0 0 1 1 1 0 0 0 1 1 1 0 1 0 0 10 1 1259.6874 Q96DD0 Q96DD0 42 51 LRRC39 Leucine-rich repeat-containing protein 39 yes yes 3 0.0064503 64.945 By matching By MS/MS 1 1 4430800 2331800 2099000 1052 1324 1125 2436;2437 1999 1999 1559 1 IWHHTFYNELR TNWDDMEKIWHHTFYN HTFYNELRVAPEEHPV K I W L R V 0 1 1 0 0 0 1 0 2 1 1 0 0 1 0 0 1 1 1 0 0 0 11 0 1514.7419 P63261;P60709;I3L3I0;I3L1U9;I3L4N8;A6NL76;P68133;P68032;Q6S8J3;C9JUM1;C9JZR7;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;P0CG39;P0CG38;A5A3E0;Q9BYX7 P63261 85 95 ACTG1;ACTB;ACTA1;ACTC1;POTEE;POTEJ;POTEI;POTEF;POTEKP Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member E;POTE ankyrin domain family member J;POTE ankyrin domain family member I;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed yes no 3 0.00046994 84.198 By MS/MS By MS/MS 1 1 4337000 2990900 1346100 1053 1017 1126 2438;2439 2000;2001 2000 2 IWSPTIGR GQTYNPWRIWSPTIGR IWSPTIGRRSSDPWSN R I W G R R 0 1 0 0 0 0 0 1 0 2 0 0 0 0 1 1 1 1 0 0 0 0 8 0 928.51305 Q92545 Q92545 1861 1868 TMEM131 Transmembrane protein 131 yes yes 2 0.01014 78.264 By MS/MS By matching 1 1 1472300 825200 647080 1054 1301 1127 2440;2441 2002 2002 1536 1 IYEDGDDDMKR GLMNVLKKIYEDGDDD DGDDDMKRTINKAWVE K I Y K R T 0 1 0 4 0 0 1 1 0 1 0 1 1 0 0 0 0 0 1 0 0 0 11 1 1355.5663 Q9HB71 Q9HB71 198 208 CACYBP Calcyclin-binding protein yes yes 2 0.0094952 55.064 By MS/MS 1 0 0 0 1055 1408 1128 2442 2003 2003 2498 1 IYEDHDATQQLQGFYSQVAK ENNGRAQRIYEDHDAT GFYSQVAKPLLVDVDL R I Y A K P 2 0 0 2 0 4 1 1 1 1 1 1 0 1 0 1 1 0 2 1 0 0 20 0 2340.1022 P19827;H7C0N0 P19827 458 477 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 3 0.017365 28.412 By MS/MS 1 412080 412080 0 1056 917 1129 2443 2004 2004 1 IYERPSTTCSKPQR NPSAPLRRIYERPSTT TTCSKPQRVKQNSESE R I Y Q R V 0 2 0 0 1 1 1 0 0 1 0 1 0 0 2 2 2 0 1 0 0 0 14 2 1721.8519 Q9BVA0 Q9BVA0 336 349 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 yes yes 3 0.0074352 52.576 By matching By MS/MS 1 1 1068700 430630 638070 1057 1369 1130 2444;2445 2005 2005 2493 1 IYESIEEAK ARLADKNKIYESIEEA YESIEEAKSEAMKEME K I Y A K S 1 0 0 0 0 0 3 0 0 2 0 1 0 0 0 1 0 0 1 0 0 0 9 0 1080.5339 Q14DU5;E9PF63;O75116 Q14DU5 36 44 ROCK2 Rho-associated protein kinase 2 yes no 2 0.0014081 95.815 By MS/MS By MS/MS 1 1 1797500 955050 842500 1058 441 1131 2446;2447 2006;2007 2007 2333 2 IYHLPDAESDEDEDFKEQTR EIEEHNIKIYHLPDAE EDFKEQTRLLKASIPF K I Y T R L 1 1 0 4 0 1 4 0 1 1 1 1 0 1 1 1 1 0 1 0 0 0 20 1 2436.0717 H7C2Y0;B5MCX3;Q15019 H7C2Y0 65 84 SEPT2 Septin-2 yes no 3 1.6704E-08 86.222 By MS/MS By MS/MS 1 1 236480000 144100000 92382000 1059 280 1132 2448;2449 2008;2009;2010 2008 342 3 IYIDCYEIIEK VVTSKSVKIYIDCYEI DCYEIIEKDIKEAGNI K I Y E K D 0 0 0 1 1 0 2 0 0 4 0 1 0 0 0 0 0 0 2 0 0 0 11 0 1457.7112 D6RGG3;Q99715;A0A087X0A8;H0Y5N9 D6RGG3 2662 2672 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.012818 64.04 By MS/MS By matching 1 1 1485000 975910 509100 1060 379 1133 2450;2451 2011 2011 1 IYLSDSLTGKFYNIGDQR LCNSLRYKIYLSDSLT FYNIGDQRGHGEDHCQ K I Y Q R G 0 1 1 2 0 1 0 2 0 2 2 1 0 1 0 2 1 0 2 0 0 0 18 1 2089.048 H0Y897;D3YTG3;Q7Z7G0 H0Y897 1045 1062 ABI3BP Target of Nesh-SH3 yes no 2 0.0024076 63.473 By MS/MS By matching 1 1 184010000 176720000 7297200 1061 362 1134 2452;2453 2012 2012 422;1962 1 IYLYTLNDNAR LQPGTDYKIYLYTLND YTLNDNARSSPVVIDA K I Y A R S 1 1 2 1 0 0 0 0 0 1 2 0 0 0 0 0 1 0 2 0 0 0 11 0 1354.6881 P02751;H0Y7Z1 P02751 1881 1891 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 2 0.018371 56.563 By MS/MS 1 376320 376320 0 1062 843 1135 2454 2013 2013 1 IYNISGNGSPLADSK RTPAAGERIYNISGNG GSPLADSKEIFLTVPV R I Y S K E 1 0 2 1 0 0 0 2 0 2 1 1 0 0 1 3 0 0 1 0 0 0 15 0 1534.7627 Q53HL2 Q53HL2 211 225 CDCA8 Borealin yes yes 2 0.0066195 70.685 By MS/MS By MS/MS 1 1 1738400 833330 905090 1063 1152 1136 2455;2456 2014;2015 2015 1344 2 IYVDDGLISLQVK KVVEVGSKIYVDDGLI GLISLQVKQKGADFLV K I Y V K Q 0 0 0 2 0 1 0 1 0 2 2 1 0 0 0 1 0 0 1 2 0 0 13 0 1461.8079 B4DNK4;P14618;H3BTN5;H3BQ34 B4DNK4 100 112 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 2.8705E-09 109.42 By MS/MS By MS/MS 1 1 3174400 1789000 1385400 1064 266 1137 2457;2458 2016;2017 2017 2 KAASPSPQSVR TPEPKKIKKAASPSPQ SPSPQSVRRVSSSRSV K K A V R R 2 1 0 0 0 1 0 0 0 0 0 1 0 0 2 3 0 0 0 1 0 0 11 1 1126.6095 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 744 754 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0028258 82.705 By matching By MS/MS 1 1 7336000 2848600 4487400 1065 247 1138 2459;2460 2018 2018 304 1 KADIVFLLDGSINFR PPSRPEKKKADIVFLL LDGSINFRRDSFQEVL K K A F R R 1 1 1 2 0 0 0 1 0 2 2 1 0 2 0 1 0 0 0 1 0 0 15 1 1706.9356 E7ENL6;P12111 E7ENL6 1030 1044 COL6A3 Collagen alpha-3(VI) chain yes no 3 1.1261E-21 140.49 By MS/MS By MS/MS 1 1 7575200 5760300 1814800 1066 403 1139 2461;2462 2019;2020 2019 2 KAEDSDSEPEPEDNVR SPLGGIKRKAEDSDSE PEPEDNVRLWEAGWKQ R K A V R L 1 1 1 3 0 0 4 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 16 1 1815.7759 Q9H0D6 Q9H0D6 495 510 XRN2 5-3 exoribonuclease 2 yes yes 2;3 1.3331E-07 99.413 By MS/MS By MS/MS 1 2 15094000 7289100 7805100 1067 1390 1140 2463;2464;2465 2021;2022;2023;2024;2025 2022 1668;1669 5 KAEGEPQEESPLK GSQEKQTKKAEGEPQE PQEESPLKSKSQEEPK K K A L K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 13 1 1440.7096 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 E9PQN2 166 178 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 1.1325E-160 199.33 By MS/MS By MS/MS 1 1 19068000 11403000 7665100 1068 457 1141 2466;2467 2026;2027 2027 533 2 KAEGEPQEESPLKSK GSQEKQTKKAEGEPQE EESPLKSKSQEEPKDT K K A S K S 1 0 0 0 0 1 4 1 0 0 1 3 0 0 2 2 0 0 0 0 0 0 15 2 1655.8366 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 E9PQN2 166 180 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 2.664E-35 151.28 By MS/MS By MS/MS 2 1 76290000 43969000 32321000 1069 457 1142 2468;2469;2470 2028;2029;2030 2028 533 3 KAEPSEVDMNSPK PKAKQVKKKAEPSEVD EVDMNSPKSKKAKKKE K K A P K S 1 0 1 1 0 0 2 0 0 0 0 2 1 0 2 2 0 0 0 1 0 0 13 1 1430.6711 Q9NR30 Q9NR30 61 73 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.00097703 70.134 By MS/MS By MS/MS 2 1 6169400 4633200 1536200 1070 1418 1143;1144 2471;2472;2473 2031;2032;2033;2034 2032 242 1714 4 KAEQGSEEEGEGEEEEEEGGESKADDPYAHLSK KQGKEKAKKAEQGSEE DPYAHLSKKEKKKLKK K K A S K K 3 0 0 2 0 1 12 5 1 0 1 3 0 0 1 3 0 0 1 0 0 0 33 2 3578.4928 Q5STZ8;Q8NE71 Q5STZ8 224 256 ABCF1 ATP-binding cassette sub-family F member 1 yes no 4 6.9556E-10 62.787 By MS/MS By MS/MS 1 1 9428700 6423500 3005300 1071 1163 1145 2474;2475 2035;2036;2037 2036 1359 3 KAPAGQEEPGTPPSSPLSAEQLDR HLQAIPAKKAPAGQEE LSAEQLDRIQRNKAAA K K A D R I 3 1 0 1 0 2 3 2 0 0 2 1 0 0 5 3 1 0 0 0 0 0 24 1 2461.2085 Q68DM5;F5GYA2;P13051 Q68DM5 41 64 DKFZp781L1143;UNG Uracil-DNA glycosylase yes no 3 0.00018938 66.432 By MS/MS 1 5370000 5370000 0 1072 490 1146 2476 2038 2038 573;2002 1 KAPTNEFYA LGKKPIYKKAPTNEFY APTNEFYA________ K K A Y A - 2 0 1 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 9 1 1039.4975 P31431 P31431 190 198 SDC4 Syndecan-4 yes yes 2 0.004495 77.282 By MS/MS By MS/MS 1 1 1551400 731670 819770 1073 945 1147 2477;2478 2039;2040 2040 2407 2 KASGPPVSELITK KSAGAAKRKASGPPVS PVSELITKAVAASKER R K A T K A 1 0 0 0 0 0 1 1 0 1 1 2 0 0 2 2 1 0 0 1 0 0 13 1 1325.7555 P10412;P16403;P16402 P10412 34 46 HIST1H1E;HIST1H1C;HIST1H1D Histone H1.4;Histone H1.2;Histone H1.3 yes no 2 0.0010097 89.232 By MS/MS By MS/MS 1 1 3542800 1824400 1718400 1074 881 1148 2479;2480 2041;2042 2042 1009 2 KASGSENEGDYNPGR KGRGAKKRKASGSENE EGDYNPGRKTSKTTSK R K A G R K 1 1 2 1 0 0 2 3 0 0 0 1 0 0 1 2 0 0 1 0 0 0 15 1 1579.6863 Q02880 Q02880 1548 1562 TOP2B DNA topoisomerase 2-beta yes yes 2 0.0045821 57.788 By matching By MS/MS 1 1 3198400 1946100 1252300 1075 1044 1149 2481;2482 2043;2044 2043 1188;1189 2 KASGSENEGDYNPGRK KGRGAKKRKASGSENE GDYNPGRKTSKTTSKK R K A R K T 1 1 2 1 0 0 2 3 0 0 0 2 0 0 1 2 0 0 1 0 0 0 16 2 1707.7812 Q02880 Q02880 1548 1563 TOP2B DNA topoisomerase 2-beta yes yes 3 0.0021647 77.357 By MS/MS By MS/MS 1 2 5982800 1947200 4035600 1076 1044 1150 2483;2484;2485 2045;2046;2047 2046 1188;1189 3 KASPEPEGEAAGK LAPTPRRRKASPEPEG PEGEAAGKMTTEEQQQ R K A G K M 3 0 0 0 0 0 3 2 0 0 0 2 0 0 2 1 0 0 0 0 0 0 13 1 1269.6201 Q8IU81 Q8IU81 382 394 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2 0.0028964 80.102 By matching By MS/MS 1 1 3263300 2032300 1231000 1077 1240 1151 2486;2487 2048 2048 1463 1 KASPEPPDSAEGALK AAASLRKRKASPEPPD DSAEGALKLGEEQQRQ R K A L K L 3 0 0 1 0 0 2 1 0 0 1 2 0 0 3 2 0 0 0 0 0 0 15 1 1495.7518 Q9H1B7 Q9H1B7 545 559 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 2 0.0025421 62.69 By MS/MS By matching 1 1 6837200 3516000 3321300 1078 1392 1152 2488;2489 2049 2049 1673 1 KASQLVGIEK VHNSTQKRKASQLVGI SQLVGIEKKFHPDV__ R K A E K K 1 0 0 0 0 1 1 1 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1071.6288 Q9NPD8 Q9NPD8 182 191 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 2 0.012188 66.538 By MS/MS By MS/MS 1 1 1280400 665400 614970 1079 1414 1153 2490;2491 2050;2051 2051 1709 2 KAVVLPGGTATSPK LMAASVARKAVVLPGG GGTATSPKMIAKNVLG R K A P K M 2 0 0 0 0 0 0 2 0 0 1 2 0 0 2 1 2 0 0 2 0 0 14 1 1324.7715 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 422 435 ZNF687 Zinc finger protein 687 yes no 2 0.0031654 76.156 By matching By MS/MS 1 1 2066300 1055700 1010600 1080 1250 1154 2492;2493 2052 2052 1476 1 KCSLPAEEDSVLEK ETVTGTGKKCSLPAEE EEDSVLEKLGERKPCN K K C E K L 1 0 0 1 1 0 3 0 0 0 2 2 0 0 1 2 0 0 0 1 0 0 14 1 1603.7763 E7EVA0;P27816 E7EVA0 651 664 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.006768 60.549 By MS/MS By matching 1 1 4492200 2635600 1856600 1081 427 1155 2494;2495 2053 2053 498 1 KDAMYGNFMLKK DSQSYGKKKDAMYGNF YGNFMLKKDIAMLKEE K K D K K D 1 0 1 1 0 0 0 1 0 0 1 3 2 1 0 0 0 0 1 0 0 0 12 2 1444.7207 Q8IVF6 Q8IVF6 321 332 ANKRD18A Ankyrin repeat domain-containing protein 18A yes yes 2 0.0068716 44.863 By MS/MS By matching 1 1 1103400 691450 411990 1082 1241 1156 2496;2497 2054 2054 220 1 KDDSHSAEDSEDEKEDHK EDKDVKTKKDDSHSAE EDEKEDHKNVRQQRQA K K D H K N 1 0 0 5 0 0 4 0 2 0 0 3 0 0 0 3 0 0 0 0 0 0 18 2 2099.8516 Q9H1E3 Q9H1E3 70 87 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0039464 69.03 By MS/MS By matching 1 1 3672800 2067600 1605200 1083 1393 1157 2498;2499 2055 2055 1675 1 KDNEESEQPPVPGTPTLR IDFGSLLKKDNEESEQ VPGTPTLRNRTFSESS K K D L R N 0 1 1 1 0 1 3 1 0 0 1 1 0 0 4 1 2 0 0 1 0 0 18 1 1992.9752 O15439 O15439 633 650 ABCC4 Multidrug resistance-associated protein 4 yes yes 3 0.0032044 49.66 By MS/MS By MS/MS 1 1 3827100 2244900 1582200 1084 773 1158 2500;2501 2056;2057 2057 2074 2 KDYDTLSK IERSNVVRKDYDTLSK KDYDTLSKCSPKMPPA R K D S K C 0 0 0 2 0 0 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 8 1 968.48148 Q9UHR4 Q9UHR4 272 279 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 7.4035E-15 131.22 By MS/MS By MS/MS 2 1 3684900 1909900 1775000 1085 1458 1159 2502;2503;2504 2058;2059;2060 2058 2508 3 KEDALLYQSK ADMYDLPKKEDALLYQ DALLYQSKGYNDDYYE K K E S K G 1 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 0 0 1 0 0 0 10 1 1193.6292 Q5HY57;P50402 Q5HY57 44 53 EMD Emerin yes no 2 0.011361 66.056 By MS/MS By MS/MS 1 1 916810 513650 403170 1086 987 1160 2505;2506 2061;2062 2061 2430 2 KEDLVFIFWAPESAPLK TYETKESKKEDLVFIF APESAPLKSKMIYASS K K E L K S 2 0 0 1 0 0 2 0 0 1 2 2 0 2 2 1 0 1 0 1 0 0 17 1 1989.0612 E9PP50;P23528;E9PQB7;G3V1A4;E9PK25;Q9Y281 E9PP50 96 112 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2;3 3.1676E-08 97.095 By MS/MS By MS/MS 1 2 19769000 10021000 9748200 1087 471 1161 2507;2508;2509 2063;2064 2063 2 KEEPSQNDISPK PKSKKAKKKEEPSQND SQNDISPKTKSLRKKK K K E P K T 0 0 1 1 0 1 2 0 0 1 0 2 0 0 2 2 0 0 0 0 0 0 12 1 1370.6678 Q9NR30 Q9NR30 80 91 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.0014227 92.039 By MS/MS By MS/MS 1 1 1757200 868040 889200 1088 1418 1162 2510;2511 2065;2066 2066 1715;1716 2 KEESPPPPK KPLPPTVKKEESPPPP EESPPPPKVVNPLIGL K K E P K V 0 0 0 0 0 0 2 0 0 0 0 2 0 0 4 1 0 0 0 0 0 0 9 1 1007.5288 E9PGM9;P78332 E9PGM9 756 764 RBM6 RNA-binding protein 6 yes no 2 0.016559 69.261 By MS/MS By matching 1 1 1472500 799170 673290 1089 447 1163 2512;2513 2067 2067 1 KELHNSPKTMNK FKRIKETKKELHNSPK NSPKTMNKTNQVYAAN K K E N K T 0 0 2 0 0 0 1 0 1 0 1 3 1 0 1 1 1 0 0 0 0 0 12 2 1425.7398 Q5T890 Q5T890 1022 1033 ERCC6L2 DNA excision repair protein ERCC-6-like 2 yes yes 3 0.016589 45.653 By MS/MS 1 188510 0 188510 1090 1171 1164 2514 2068 2068 211 0 KELSPAGSISK AKKLKRMKKELSPAGS SPAGSISKNSPATLFE K K E S K N 1 0 0 0 0 0 1 1 0 1 1 2 0 0 1 3 0 0 0 0 0 0 11 1 1115.6186 O95453 O95453 616 626 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.016044 62.528 By matching By MS/MS 1 1 4698400 2558700 2139700 1091 821 1165 2515;2516 2069 2069 1 KETESEAEDNLDDLEK PVAAPEPKKETESEAE DNLDDLEKHLREKALR K K E E K H 1 0 1 3 0 0 5 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 16 1 1863.8222 A9Z1X7;Q8IYB3 A9Z1X7 879 894 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 3.4676E-20 128.29 By MS/MS By MS/MS 3 3 53895000 32219000 21676000 1092 247 1166 2517;2518;2519;2520;2521;2522 2070;2071;2072;2073;2074 2071 305;1945 5 KETPPKEVK KEPKKEVKKETPPKEV ETPPKEVKKEVKKEEK K K E V K K 0 0 0 0 0 0 2 0 0 0 0 3 0 0 2 0 1 0 0 1 0 0 9 2 1054.6023 P46821 P46821 702 710 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.0065041 56.432 By MS/MS 1 2458300 2458300 0 1093 968 1167 2523 2075 2075 2124 1 KETPPPLVPPAAR ________________ PLVPPAAREWNLPPNA R K E A R E 2 1 0 0 0 0 1 0 0 0 1 1 0 0 5 0 1 0 0 1 0 0 13 1 1371.7874 Q9BQA1 Q9BQA1 3 15 WDR77 Methylosome protein 50 yes yes 2;3 9.1737E-09 113.54 By MS/MS By MS/MS 2 2 17009000 10416000 6592500 1094 1361 1168 2524;2525;2526;2527 2076;2077;2078;2079 2079 2211 4 KETQSPEQVK NSERITVKKETQSPEQ TQSPEQVKSEKLKDLF K K E V K S 0 0 0 0 0 2 2 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 1 1172.6037 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 490 499 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.00014533 133.88 By MS/MS By MS/MS 1 1 27446000 13506000 13940000 1095 457 1169 2528;2529 2080;2081 2080 536;1998 2 KETQSPEQVKSEK NSERITVKKETQSPEQ PEQVKSEKLKDLFDYS K K E E K L 0 0 0 0 0 2 3 0 0 0 0 3 0 0 1 2 1 0 0 1 0 0 13 2 1516.7733 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 490 502 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0012169 67.994 By MS/MS By MS/MS 1 1 38174000 24202000 13972000 1096 457 1170 2530;2531 2082;2083 2082 536;1998 2 KEVSKYSDIQR QYVPMLERKEVSKYSD SKYSDIQRSLYDRPAS R K E Q R S 0 1 0 1 0 1 1 0 0 1 0 2 0 0 0 2 0 0 1 1 0 0 11 2 1351.7096 A0A0B4J203;P16234 A0A0B4J203 509 519 FIP1L1;PDGFRA Platelet-derived growth factor receptor alpha yes no 2 0.018482 48.091 By MS/MS By matching 1 1 1300300 763550 536770 1097 138 1171 2532;2533 2084 2084 2272 1 KEVSPEVVR KREEIIIKKEVSPEVV EVSPEVVRSKLSPSPS K K E V R S 0 1 0 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 9 1 1041.5819 Q5T200;A0A087WX14 Q5T200 195 203 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.0077622 81.625 By matching By MS/MS 1 1 5360200 3001300 2358900 1098 1167 1172 2534;2535 2085 2085 1364 1 KFDGVEGPRTPK FDYQFGYRKFDGVEGP VEGPRTPKYMNNITYY R K F P K Y 0 1 0 1 0 0 1 2 0 0 0 2 0 1 2 0 1 0 0 1 0 0 12 2 1329.7041 A0A0B4J210;Q6PKG0;E5RH50;H0YBW1;H0YAN4 A0A0B4J210 367 378 LARP1 La-related protein 1 yes no 3 0.0002652 89.466 By MS/MS By MS/MS 1 1 5896000 3356800 2539300 1099 139 1173 2536;2537 2086;2087 2087 1927 2 KFQEQECPPSPEPTR HELVRVIRKFQEQECP PPSPEPTRKEKDKKGC R K F T R K 0 1 0 0 1 2 3 0 0 0 0 1 0 1 4 1 1 0 0 0 0 0 15 1 1828.8414 P62070 P62070 177 191 RRAS2 Ras-related protein R-Ras2 yes yes 3 0.0034106 67.648 By matching By MS/MS 1 1 7480900 5272700 2208200 1100 1019 1174 2538;2539 2088 2088 1168 1 KFQEQECPPSPEPTRK HELVRVIRKFQEQECP PSPEPTRKEKDKKGCH R K F R K E 0 1 0 0 1 2 3 0 0 0 0 2 0 1 4 1 1 0 0 0 0 0 16 2 1956.9364 P62070 P62070 177 192 RRAS2 Ras-related protein R-Ras2 yes yes 3 0.0024437 63.706 By matching By MS/MS 1 1 7128200 4545300 2582900 1101 1019 1175 2540;2541 2089 2089 1168 1 KFSKEEPVSSGPEEAVGK RSGSKKKRKFSKEEPV GPEEAVGKSSSKKKKK R K F G K S 1 0 0 0 0 0 4 2 0 0 0 3 0 1 2 3 0 0 0 2 0 0 18 2 1903.9527 O00567 O00567 561 578 NOP56 Nucleolar protein 56 yes yes 3 0.012058 46.249 By MS/MS 1 3060200 3060200 0 1102 757 1176 2542 2090 2090 880;881 0 KGAAPTPPGK APAKESPRKGAAPTPP AAPTPPGKTGPSAAQA R K G G K T 2 0 0 0 0 0 0 2 0 0 0 2 0 0 3 0 1 0 0 0 0 0 10 1 922.52362 J3KQ96;E7ETY2;Q13428;H0YAB7 J3KQ96 909 918 TCOF1 Treacle protein yes no 2 0.011895 77.185 By matching By MS/MS 1 1 3275100 1570400 1704700 1103 422 1177 2543;2544 2091 2091 1 KGAGDGSDEEVDGK VVPRRMARKGAGDGSD SDEEVDGKADGAEAKP R K G G K A 1 0 0 3 0 0 2 4 0 0 0 2 0 0 0 1 0 0 0 1 0 0 14 1 1362.5899 P35579 P35579 1937 1950 MYH9 Myosin-9 yes yes 2 1.105E-19 137.27 By MS/MS By MS/MS 1 1 2492900 0 2492900 1104 950 1178 2545;2546 2092;2093 2093 1067 2 KGHEYTNIK EEEQKSKRKGHEYTNI GHEYTNIKYSLADQTS R K G I K Y 0 0 1 0 0 0 1 1 1 1 0 2 0 0 0 0 1 0 1 0 0 0 9 1 1088.5615 Q06124 Q06124 542 550 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 3 0.0077578 66.568 By matching By MS/MS 1 1 4090200 2260900 1829300 1105 1054 1179 2547;2548 2094 2094 2441 1 KGNSPNSEPPTPK RPPEADGKKGNSPNSE NSEPPTPKTAWAETSR K K G P K T 0 0 2 0 0 0 1 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 13 1 1351.6732 P48634 P48634 377 389 PRRC2A Protein PRRC2A yes yes 2 0.0031233 79.639 By MS/MS 1 1248000 0 1248000 1106 973 1180 2549 2095;2096 2096 1111 2 KGPDEAEESQYDSGIESLR ________________ DSGIESLRSLRSLPES R K G L R S 1 1 0 2 0 1 4 2 0 1 1 1 0 0 1 3 0 0 1 0 0 0 19 1 2108.9498 H3BNC2;Q7LC14;O00221 H3BNC2 6 24 NFKBIE NF-kappa-B inhibitor epsilon yes no 3 0.017085 41.257 By MS/MS By matching 1 1 1177100 656340 520710 1107 640 1181 2550;2551 2097 2097 2362 1 KGPGQPSSPQR ARGGGKGRKGPGQPSS GQPSSPQRLDRLSGLA R K G Q R L 0 1 0 0 0 2 0 2 0 0 0 1 0 0 3 2 0 0 0 0 0 0 11 1 1137.5891 O95400 O95400 188 198 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 2;3 5.9197E-07 136.27 By MS/MS By MS/MS 2 1 25128000 14894000 10233000 1108 819 1182 2552;2553;2554 2098;2099;2100 2099 967;968 3 KGQGGAGAGDDEEED RVKRKNAKKGQGGAGA AGDDEEED________ K K G E D - 2 0 0 3 0 1 3 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 15 1 1433.5543 A0A024R4M0;P46781 A0A024R4M0 180 194 RPS9 40S ribosomal protein S9 yes no 2 3.6956E-14 121.68 By matching By MS/MS 1 1 1827200 1038900 788300 1109 2 1183 2555;2556 2101 2101 1 KGSDDAPYSPTAR FKSRSKKRKGSDDAPY APYSPTARVGPSVPRQ R K G A R V 2 1 0 2 0 0 0 1 0 0 0 1 0 0 2 2 1 0 1 0 0 0 13 1 1363.6368 E7ET14;A0A087WW48;O75151 E7ET14 110 122 PHF2 Lysine-specific demethylase PHF2 yes no 2 0.0006841 86.548 By MS/MS By matching 1 1 1805000 910060 894990 1110 41 1184 2557;2558 2102 2102 49 1 KGSITEYTAAEEK PKTTEVIRKGSITEYT EYTAAEEKEDGRRWRM R K G E K E 2 0 0 0 0 0 3 1 0 1 0 2 0 0 0 1 2 0 1 0 0 0 13 1 1425.6987 J3KN59;Q12982 J3KN59 233 245 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 yes no 2 0.0050134 71.279 By MS/MS By MS/MS 1 1 3428000 1724000 1704000 1111 700 1185 2559;2560 2103;2104 2103 827;2061 2 KGSPTPGFSTR PTSAYPERKGSPTPGF PTPGFSTRRGSPTTGF R K G T R R 0 1 0 0 0 0 0 2 0 0 0 1 0 1 2 2 2 0 0 0 0 0 11 1 1133.5829 J3KPS2;Q6ZRV2 J3KPS2 606 616 FAM83H Protein FAM83H yes no 2 0.01316 65.219 By MS/MS By MS/MS 1 1 1336100 796140 539940 1112 704 1186 2561;2562 2105;2106 2105 1 KGSSGNASEVSVACLTER IPSIERSRKGSSGNAS SVACLTERIHQMEENQ R K G E R I 2 1 1 0 1 0 2 2 0 0 1 1 0 0 0 4 1 0 0 2 0 0 18 1 1850.8792 F8WAN1;Q69YQ0;C9J8U1 F8WAN1 382 399 SPECC1L-ADORA2A;SPECC1L Cytospin-A yes no 3 0.0042877 63.488 By matching By MS/MS 1 1 3891900 2069600 1822300 1113 534 1187 2563;2564 2107 2107 624 1 KGSSSSVCSVASSSDISLGSTK AAAGSSSRKGSSSSVC DISLGSTKTERRSEIV R K G T K T 1 0 0 1 1 0 0 2 0 1 1 2 0 0 0 10 1 0 0 2 0 0 22 1 2130.011 H0YJP0;A0A087X2H1;Q9ULT8 H0YJP0 809 830 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes no 3 0.0038249 68.569 By matching By MS/MS 1 1 2494400 1060400 1434000 1114 85 1188 2565;2566 2108 2108 101;102;103;104 1 KGTKAPQAAGK EVRAWTIRKGTKAPQA KAPQAAGKIHTDFEKG R K G G K I 3 0 0 0 0 1 0 2 0 0 0 3 0 0 1 0 1 0 0 0 0 0 11 2 1055.6087 J3KQ32;Q9NTK5 J3KQ32 343 353 OLA1 Obg-like ATPase 1 yes no 2 0.0098293 55.04 By MS/MS By matching 1 1 1429500 850250 579290 1115 705 1189 2567;2568 2109 2109 2064 1 KHSPSPPPPTPTESR ASANARKRKHSPSPPP PPTPTESRKKSGKKGQ R K H S R K 0 1 0 0 0 0 1 0 1 0 0 1 0 0 6 3 2 0 0 0 0 0 15 1 1613.8162 Q92922 Q92922 326 340 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3 1.832E-14 123.54 By MS/MS By MS/MS 2 2 18594000 8717100 9876700 1116 1317 1190;1191 2569;2570;2571;2572 2110;2111;2112;2113;2114 2113 1550;1551;2199 5 KHSQTDLVSR KQPPPLMKKHSQTDLV SQTDLVSRLKTRKILG K K H S R L 0 1 0 1 0 1 0 0 1 0 1 1 0 0 0 2 1 0 0 1 0 0 10 1 1169.6153 E9PN66;E9PNB3;E9PKN9;E9PS55;E9PMY0;E9PMW4;E9PQ46;E9PIN5;E9PIK4;U3KQ32;E9PKZ4;E9PPM1;O14683 E9PN66 12 21 TP53I11 Tumor protein p53-inducible protein 11 yes no 3 1.1819E-05 101.56 By MS/MS By MS/MS 2 2 4352000 2378500 1973500 1117 450 1192 2573;2574;2575;2576 2115;2116;2117 2115 1995 3 KISPPSYAR REKRLRGRKISPPSYA ISPPSYARRDSPTYDP R K I A R R 1 1 0 0 0 0 0 0 0 1 0 1 0 0 2 2 0 0 1 0 0 0 9 1 1017.5607 F5H0Q6;A0A0A0MQS2;Q8N2M8 F5H0Q6 283 291 CLASRP CLK4-associating serine/arginine rich protein yes no 2 0.0014971 96.756 By MS/MS By matching 1 1 2566700 1317300 1249500 1118 91 1193 2577;2578 2118 2118 111 1 KITIADCGQLE SRNGKTSKKITIADCG IADCGQLE________ K K I L E - 1 0 0 1 1 1 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1246.6227 P62937 P62937 155 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.0019053 90.15 By MS/MS By MS/MS 1 1 7436800 4053000 3383800 1119 1027 1194 2579;2580 2119;2120 2120 2 KITSVSQVPR KIWEGIARKITSVSQV TSVSQVPRSVKDIKHR R K I P R S 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 2 1 0 0 2 0 0 10 1 1113.6506 H3BSZ2 H3BSZ2 205 214 PRDM11 yes yes 2 0.00055955 87.568 By MS/MS By matching 1 1 7289700 4048300 3241400 1120 662 1195 2581;2582 2121 2121 29 779;780 1 KIYEDGDDDMKR EGLMNVLKKIYEDGDD DGDDDMKRTINKAWVE K K I K R T 0 1 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 1 0 0 0 12 2 1483.6613 Q9HB71 Q9HB71 197 208 CACYBP Calcyclin-binding protein yes yes 3 0.00017869 100.73 By MS/MS By MS/MS 1 1 3995100 1201100 2794000 1121 1408 1196 2583;2584 2122;2123 2123 2498 2 KKAEPSEVDMNSPK FPKAKQVKKKAEPSEV EVDMNSPKSKKAKKKE K K K P K S 1 0 1 1 0 0 2 0 0 0 0 3 1 0 2 2 0 0 0 1 0 0 14 2 1558.7661 Q9NR30 Q9NR30 60 73 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.00086945 77.027 By MS/MS By matching 1 1 5354300 3443000 1911300 1122 1418 1197 2585;2586 2124 2124 242 1714 1 KKDELSDYAEK KIRDKTSKKKDELSDY ELSDYAEKSTGKGDSC K K K E K S 1 0 0 2 0 0 2 0 0 0 1 3 0 0 0 1 0 0 1 0 0 0 11 2 1324.6511 P46100;A0A096LNL9;A0A096LP59 P46100 1056 1066 ATRX Transcriptional regulator ATRX yes no 3 0.01905 56.29 By matching By MS/MS 1 1 1670600 1006700 663950 1123 966 1198 2587;2588 2125 2125 1 KKEEPSQNDISPK SPKSKKAKKKEEPSQN SQNDISPKTKSLRKKK K K K P K T 0 0 1 1 0 1 2 0 0 1 0 3 0 0 2 2 0 0 0 0 0 0 13 2 1498.7627 Q9NR30 Q9NR30 79 91 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 1.0024E-08 122.33 By MS/MS By MS/MS 2 2 29033000 13209000 15824000 1124 1418 1199 2589;2590;2591;2592 2126;2127;2128;2129 2128 1715;1716 4 KKEPAITSQNSPEAR TEKDLDEKKKEPAITS SQNSPEAREERYFTV_ K K K A R E 2 1 1 0 0 1 2 0 0 1 0 2 0 0 2 2 1 0 0 0 0 0 15 2 1654.8638 E5RIS7;P23193 E5RIS7 90 104 TCEA1 Transcription elongation factor A protein 1 yes no 3 3.5929E-08 104.68 By MS/MS By MS/MS 1 1 13228000 7415800 5812400 1125 392 1200 2593;2594 2130;2131;2132;2133 2131 444 4 KKNDIYGED FDFEEMKRKKNDIYGE KNDIYGED________ R K K E D - 0 0 1 2 0 0 1 1 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1080.5088 P50395 P50395 437 445 GDI2 Rab GDP dissociation inhibitor beta yes yes 2 9.9532E-16 150.36 By MS/MS By MS/MS 1 1 12323000 5759700 6563300 1126 986 1201 2595;2596 2134;2135;2136;2137;2138;2139;2140 2139 2425 7 KKSIVAVEPR PQPRRRGRKKSIVAVE SIVAVEPRSLIQGAFQ R K K P R S 1 1 0 0 0 0 1 0 0 1 0 2 0 0 1 1 0 0 0 2 0 0 10 2 1125.687 Q5VZL5;H7C1I7 Q5VZL5 1179 1188 ZMYM4 Zinc finger MYM-type protein 4 yes no 2 0.012603 52.495 By MS/MS 1 0 0 0 1127 1180 1202 2597 2141 2141 1 KKSPIINESR DKSKSKDRKKSPIINE SPIINESRSRDRGKKS R K K S R S 0 1 1 0 0 0 1 0 0 2 0 2 0 0 1 2 0 0 0 0 0 0 10 2 1170.6721 Q13523 Q13523 275 284 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 3 0.016951 63.662 By MS/MS 1 3161100 3161100 0 1128 1085 1203 2598 2142 2142 1 KLATPPAAQESSR LDLRGHKRKLATPPAA PAAQESSRRRSRKGHL R K L S R R 3 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 1 0 0 0 0 0 13 1 1354.7205 H0Y760;Q9Y4B4 H0Y760 1086 1098 RAD54L2 Helicase ARIP4 yes no 3 0.00020774 90.379 By MS/MS By MS/MS 1 1 1583600 971340 612290 1129 596 1204 2599;2600 2143;2144 2144 2036 2 KLEDVKNSPTFK SVGSVITKKLEDVKNS VKNSPTFKSFEEKVEN K K L F K S 0 0 1 1 0 0 1 0 0 0 1 3 0 1 1 1 1 0 0 1 0 0 12 2 1404.7613 H0YC42;P55327 H0YC42 164 175 TPD52 Tumor protein D52 yes no 3 0.00045664 82.505 By MS/MS By matching 1 1 6792400 4218800 2573600 1130 610 1205 2601;2602 2145 2145 2043 1 KLEKEEEEGISQESSEEEQ RKPRGRPKKLEKEEEE QESSEEEQ________ K K L E Q - 0 0 0 0 0 2 9 1 0 1 1 2 0 0 0 3 0 0 0 0 0 0 19 2 2235.9867 P17096 P17096 89 107 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2;3 2.6248E-27 117.78 By MS/MS By MS/MS 2 2 100160000 48263000 51896000 1131 905 1206 2603;2604;2605;2606 2146;2147;2148;2149;2150;2151;2152 2149 1023;1024 7 KLGAGEGGEASVSPEKTSTTSK TPRSKKKKKLGAGEGG EKTSTTSKGKAKRDKA K K L S K G 2 0 0 0 0 0 3 4 0 0 1 3 0 0 1 4 3 0 0 1 0 0 22 2 2120.0597 J3KQ96;E7ETY2;Q13428 J3KQ96 1328 1349 TCOF1 Treacle protein yes no 3 1.7533E-30 113.62 By MS/MS By MS/MS 1 1 21924000 16654000 5269500 1132 422 1207 2607;2608 2153;2154 2154 482 2 KLHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALR QEEIAFLKKLHEEEIQ PDLTAALRDVRQQYES K K L L R D 3 1 0 3 0 6 5 0 2 3 4 2 0 0 1 1 1 0 0 3 0 0 35 2 4050.1022 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 236 270 VIM Vimentin yes no 5 0.00042702 49.623 By MS/MS By matching 1 1 3123100 1738400 1384700 1133 874 1208 2609;2610 2155 2155 1 KLLLDPSSPPTK ________________ DPSSPPTKALNGAEPN R K L T K A 0 0 0 1 0 0 0 0 0 0 3 2 0 0 3 2 1 0 0 0 0 0 12 1 1294.7497 H0YFI1;F5H479;F5GX19;F5H3Y3;Q6IAA8 H0YFI1 7 18 LAMTOR1 Ragulator complex protein LAMTOR1 yes no 2 0.010902 89.46 By MS/MS 1 0 0 0 1134 486 1209 2611 2156 2156 571 1 KLMFKTEGPDSD GQSTSRHKKLMFKTEG KTEGPDSD________ K K L S D - 0 0 0 2 0 0 1 1 0 0 1 2 1 1 1 1 1 0 0 0 0 0 12 2 1366.6439 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 223 234 TP53 Cellular tumor antigen p53 yes no 2 7.0732E-10 135.04 By MS/MS By MS/MS 2 2 19618000 8282200 11335000 1135 65 1210;1211 2612;2613;2614;2615 2157;2158;2159 2158 8 74 3 KLSGDQPAAR KGWESRKRKLSGDQPA SGDQPAARTPRSKKKK R K L A R T 2 1 0 1 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 1 1041.5567 J3KQ96;E7ETY2;Q13428 J3KQ96 1310 1319 TCOF1 Treacle protein yes no 2 0.0021424 86.262 By MS/MS By MS/MS 1 1 40677000 17787000 22890000 1136 422 1212 2616;2617 2160;2161 2160 483 2 KLSKFGSIR NESNSLSRKLSKFGSI LSKFGSIRYKHRYSGR R K L I R Y 0 1 0 0 0 0 0 1 0 1 1 2 0 1 0 2 0 0 0 0 0 0 9 2 1034.6237 Q9HCS5 Q9HCS5 308 316 EPB41L4A Band 4.1-like protein 4A yes yes 2 0.01044 59.975 By MS/MS By matching 1 1 12117000 6805300 5311500 1137 1411 1213 2618;2619 2162 2162 1705;1706 1 KLSNPDIFSSTGK GVSPLLFRKLSNPDIF DIFSSTGKVKLQRQLS R K L G K V 0 0 1 1 0 0 0 1 0 1 1 2 0 1 1 3 1 0 0 0 0 0 13 1 1392.7249 Q6P0Q8 Q6P0Q8 72 84 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 2 0.018683 54.094 By MS/MS By matching 1 1 1529800 881440 648380 1138 1192 1214 2620;2621 2163 2163 1 KLSRSPSPR KKPRSPKRKLSRSPSP LSRSPSPRRHKKEKKK R K L P R R 0 2 0 0 0 0 0 0 0 0 1 1 0 0 2 3 0 0 0 0 0 0 9 2 1026.5934 Q5T757;Q05519;Q5T760 Q5T757 304 312 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.0056179 60.157 By MS/MS By MS/MS 1 1 9747400 5325300 4422100 1139 1051 1215 2622;2623 2164;2165 2164 1201;1202;1203 2 KLSSSDAPAQDTGSSAAAVETDASR KVAGKVTRKLSSSDAP AVETDASRTGAQQKMR R K L S R T 6 1 0 3 0 1 1 1 0 0 1 1 0 0 1 6 2 0 0 1 0 0 25 1 2421.1256 H0YIM6;H0YHT2;A0A1B0GV47;Q7Z4S6 H0YIM6 109 133 KIF21A Kinesin-like protein KIF21A yes no 3 9.1302E-20 93.073 By MS/MS By matching 1 1 30204000 15227000 14976000 1140 214 1216 2624;2625 2166;2167 2167 268;269 2 KLSSSSEPYEEDEFNDDQSIKK AGGGPRKRKLSSSSEP NDDQSIKKTRLDHCAW R K L K K T 0 0 1 3 0 1 4 0 0 1 1 3 0 1 1 5 0 0 1 0 0 0 22 2 2574.1609 D6RAY8;Q9H4L7 D6RAY8 209 230 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 0.0051112 48.229 By MS/MS By matching 1 1 8091000 3918900 4172100 1141 370 1217 2626;2627 2168 2168 430;431;432;433 1 KLSVPTSDEEDEVPAPKPR KELMERLKKLSVPTSD EVPAPKPRGGKKTKGG K K L P R G 1 1 0 2 0 0 3 0 0 0 1 2 0 0 4 2 1 0 0 2 0 0 19 2 2093.0641 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 104 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 2.7137E-16 105.57 By MS/MS By MS/MS 2 2 12094000 5738100 6356300 1142 1163 1218;1219 2628;2629;2630;2631 2169;2170;2171;2172 2169 1360;2175 4 KMDLTVNGEQLDLDPGQTLIYYVDEK GESLFHSKKMDLTVNG LIYYVDEKAPEFSMQG K K M E K A 0 0 1 4 0 2 2 2 0 1 4 2 1 0 1 0 2 0 2 2 0 0 26 1 2996.4689 B5MCA4;P16422 B5MCA4 258 283 EPCAM Epithelial cell adhesion molecule yes no 3 0.0086675 54.096 By MS/MS By matching 1 1 9347200 6528800 2818400 1143 277 1220 2632;2633 2173 2173 50 1 KMLGEDSDEEEEMDTSER QQQILLEKKMLGEDSD EEMDTSERKINAGSQD K K M E R K 0 1 0 3 0 0 6 1 0 0 1 1 2 0 0 2 1 0 0 0 0 0 18 1 2128.8413 A0A087X0M4;Q9BWU0;H7C256;A0A087WWF4 A0A087X0M4 252 269 SLC4A1AP Kanadaptin yes no 3 0.0042346 61.963 By matching By MS/MS 1 1 2073100 787180 1285900 1144 72 1221 2634;2635 2174 2174 84 1 KNDLITHQRIHTGEK ECGKFSLRKNDLITHQ QRIHTGEKPYKCSDCG R K N E K P 0 1 1 1 0 1 1 1 2 2 1 2 0 0 0 0 2 0 0 0 0 0 15 2 1788.9595 H9KV89;A0A087X254;Q8N8J6 H9KV89 669 683 ZNF615 Zinc finger protein 615 yes no 2 0.017564 50.194 By MS/MS 1 0 0 0 1145 80 1222 2636 2175 2175 1 KNGSTAVAESVASPQK EKPATGERKNGSTAVA ESVASPQKTMSVLSCI R K N Q K T 3 0 1 0 0 1 1 1 0 0 0 2 0 0 1 3 1 0 0 2 0 0 16 1 1572.8107 Q12888;A6NNK5;C9JXV0 Q12888 1016 1031 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.0091532 55.208 By MS/MS 1 0 0 0 1146 1069 1223 2637 2176 2176 1224 1 KNLEATYGTVR MTASQQSRKNLEATYG EATYGTVRTGNRTLFE R K N V R T 1 1 1 0 0 0 1 1 0 0 1 1 0 0 0 0 2 0 1 1 0 0 11 1 1250.6619 E7ESJ3;Q9UPS8 E7ESJ3 339 349 ANKRD26 Ankyrin repeat domain-containing protein 26 yes no 2 0.0085967 81.525 By MS/MS By matching 1 1 2060600 1294000 766560 1147 417 1224 2638;2639 2177 2177 1982 1 KNQKPSQVNGAPGSPTEPAGQK AKSPKLQKKNQKPSQV PTEPAGQKQHQKALPK K K N Q K Q 2 0 2 0 0 3 1 3 0 0 0 3 0 0 4 2 1 0 0 1 0 0 22 2 2219.1295 I3L1L3;Q9BQG0 I3L1L3 1174 1195 MYBBP1A Myb-binding protein 1A yes no 3 0.0054072 42.908 By MS/MS By matching 1 1 5346300 2344800 3001500 1148 690 1225 2640;2641 2178 2178 816 1 KNSLRVEGDNIYVR HLQLIEGKKNSLRVEG EGDNIYVRHSNLMLEE K K N V R H 0 2 2 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 1 2 0 0 14 2 1661.8849 O43491;H0Y5B0 O43491 612 625 EPB41L2 Band 4.1-like protein 2 yes no 3 0.0010543 65.298 By MS/MS By MS/MS 2 1 13101000 7992500 5108900 1149 783 1226;1227 2642;2643;2644 2179;2180;2181;2182 2181 912;2388 4 KNSTDLDSAPEDPTSPK LGSYRKKRKNSTDLDS PEDPTSPKRKMRRRSS R K N P K R 1 0 1 3 0 0 1 0 0 0 1 2 0 0 3 3 2 0 0 0 0 0 17 1 1800.8378 A0A0A0MQR4;I3L2J0;Q96RK0;I3L373;I3L135;I3L1Q4 A0A0A0MQR4 1393 1409 CIC Protein capicua homolog yes no 2 0.011518 51.463 By MS/MS By matching 1 1 1228300 761720 466560 1150 90 1228 2645;2646 2183 2183 109;1910 1 KPAQEETEETSSQESAEED WPQQVVQKKPAQEETE SQESAEED________ K K P E D - 2 0 0 1 0 2 7 0 0 0 0 1 0 0 1 3 2 0 0 0 0 0 19 1 2122.8662 P52926 P52926 91 109 HMGA2 High mobility group protein HMGI-C yes yes 2 0.0057083 58.831 By matching By MS/MS 1 1 2656500 1505800 1150700 1151 1002 1229 2647;2648 2184 2184 1147 1 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR RQVEPPAKKPATPAED DKEAAQLREERLRQYA K K P L R E 4 1 1 8 0 1 6 1 0 1 2 2 0 1 2 1 1 0 0 0 0 0 32 2 3576.55 E9PL71;E9PQ49;E9PI39;E9PQZ1;E9PK01;A0A087X1X7;E9PRY8;P29692;H0YE72 E9PL71 120 151 EEF1D Elongation factor 1-delta yes no 4 1.5894E-32 94.834 By MS/MS By MS/MS 1 1 18406000 9377800 9027900 1152 78 1230 2649;2650 2185;2186 2186 92 2 KPEDVLDDDDAGSAPLK IFIYEKRRKPEDVLDD DAGSAPLKSSGQHQND R K P L K S 2 0 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 17 1 1783.8476 A0A087WUV8;P35613 A0A087WUV8 154 170 BSG Basigin yes no 2 0.013832 51.265 By matching By MS/MS 1 1 5058400 2840400 2218000 1153 29 1231 2651;2652 2187 2187 30 1 KPESPYGNLCDAPDSPRPVK NVRKPTPRKPESPYGN PDSPRPVKASREDSGL R K P V K A 1 1 1 2 1 0 1 1 0 0 1 2 0 0 5 2 0 0 1 1 0 0 20 2 2226.0739 Q9UKA4 Q9UKA4 419 438 AKAP11 A-kinase anchor protein 11 yes yes 3 0.0055537 58.29 By MS/MS By matching 1 1 1538300 883540 654730 1154 1463 1232 2653;2654 2188 2188 1770 1 KPGPPLSPEIRSPAGSPELR PPVSPELRKPGPPLSP PAGSPELRKPSGSPDL R K P L R K 1 2 0 0 0 0 2 2 0 1 2 1 0 0 6 3 0 0 0 0 0 0 20 2 2084.1378 Q96JM3 Q96JM3 421 440 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.018736 42.791 By MS/MS 1 2601200 0 2601200 1155 1338 1233 2655 2189 2189 1 KPGPSGPSESPK KPVFPETRKPGPSGPS SGPSESPKAASDIWKP R K P P K A 0 0 0 0 0 0 1 2 0 0 0 2 0 0 4 3 0 0 0 0 0 0 12 1 1166.5932 Q96JM3 Q96JM3 498 509 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.010764 65.472 By matching By MS/MS 1 1 3566100 1801300 1764800 1156 1338 1234 2656;2657 2190 2190 1582 1 KPIETGSPK EKEKKEEKKPIETGSP PIETGSPKTKECSVEK K K P P K T 0 0 0 0 0 0 1 1 0 1 0 2 0 0 2 1 1 0 0 0 0 0 9 1 955.53385 Q5T757;Q05519 Q5T757 383 391 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.00028566 102.05 By MS/MS By MS/MS 1 1 25457000 13133000 12324000 1157 1051 1235 2658;2659 2191;2192 2191 2143 1 KPLVIIAEDVDGEALSTLVLNR LEIANAHRKPLVIIAE LSTLVLNRLKVGLQVV R K P N R L 2 1 1 2 0 0 2 1 0 2 4 1 0 0 1 1 1 0 0 3 0 0 22 1 2364.3264 P10809 P10809 269 290 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 1.0468E-06 79.942 By matching By MS/MS 1 1 10259000 6471900 3786600 1158 883 1236 2660;2661 2193 2193 1 KPSDGSPDTKPSR LLPHAFSRKPSDGSPD SPDTKPSRLASKTKTS R K P S R L 0 1 0 2 0 0 0 1 0 0 0 2 0 0 3 3 1 0 0 0 0 0 13 2 1370.679 Q92733 Q92733 207 219 PRCC Proline-rich protein PRCC yes yes 3 0.0034464 74.993 By MS/MS By MS/MS 1 1 3798500 1764200 2034300 1159 1310 1237 2662;2663 2194;2195 2194 1545;1546 2 KPSGSPDLWK PAGSPELRKPSGSPDL SGSPDLWKLSPDQRKT R K P W K L 0 0 0 1 0 0 0 1 0 0 1 2 0 0 2 2 0 1 0 0 0 0 10 1 1113.5819 Q96JM3 Q96JM3 441 450 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0001664 99.669 By MS/MS By MS/MS 1 1 3533200 2080700 1452500 1160 1338 1238 2664;2665 2196;2197 2196 1583;1584 2 KPSIVTK SGSSRSKRKPSIVTKY RKPSIVTKYVESDDEK R K P T K Y 0 0 0 0 0 0 0 0 0 1 0 2 0 0 1 1 1 0 0 1 0 0 7 1 771.48544 P46100;A0A096LNL9;A0A096LNN3;A0A096LNW1;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100 82 88 ATRX Transcriptional regulator ATRX yes no 2 0.0018195 86.136 By MS/MS By MS/MS 2 1 0 0 0 1161 966 1239 2666;2667;2668 2198;2199;2200 2199 2123 3 KPSPEPEGEVGPPK VARTARKRKPSPEPEG EGEVGPPKINGEAQPW R K P P K I 0 0 0 0 0 0 3 2 0 0 0 2 0 0 5 1 0 0 0 1 0 0 14 1 1446.7355 Q7Z5L9 Q7Z5L9 358 371 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 0.0031963 74.296 By MS/MS By MS/MS 2 1 3761100 2562900 1198100 1162 1223 1240 2669;2670;2671 2201;2202;2203;2204;2205 2204 1434 4 KPSPQPSSPR QQPAQQPKKPSPQPSS SPQPSSPRQVKRAVVV K K P P R Q 0 1 0 0 0 1 0 0 0 0 0 1 0 0 4 3 0 0 0 0 0 0 10 1 1079.5724 G3V5E1;O75909 G3V5E1 322 331 CCNK Cyclin-K yes no 2 0.0019745 73.219 By matching By MS/MS 1 1 2493100 1313800 1179300 1163 565 1241 2672;2673 2206 2206 665;666 1 KPSVSEEVQATPNK IQSRKVERKPSVSEEV EVQATPNKAGPKLKDP R K P N K A 1 0 1 0 0 1 2 0 0 0 0 2 0 0 2 2 1 0 0 2 0 0 14 1 1512.7784 Q9UKJ3 Q9UKJ3 1105 1118 GPATCH8 G patch domain-containing protein 8 yes yes 2 7.2642E-06 76.143 By matching By MS/MS 1 1 1752000 1013100 738860 1164 1466 1242 2674;2675 2207 2207 1775 0 KPTAEASPVK VALDLSVRKPTAEASP TAEASPVKASRSVEHA R K P V K A 2 0 0 0 0 0 1 0 0 0 0 2 0 0 2 1 1 0 0 1 0 0 10 1 1026.571 H3BMJ2;Q6ZRI6 H3BMJ2 449 458 C15orf39 Uncharacterized protein C15orf39 yes no 2 0.0017386 73.499 By MS/MS By matching 1 1 1661300 925290 736020 1165 636 1243 2676;2677 2208 2208 2046 0 KPVTVSPTTPTSPTEGEAS AELDRITRKPVTVSPT SPTEGEAS________ R K P A S - 1 0 0 0 0 0 2 1 0 0 0 1 0 0 4 3 5 0 0 2 0 0 19 1 1884.9317 E9PHI6;Q9Y6G9 E9PHI6 389 407 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 0.00059122 74.46 By MS/MS By matching 2 2 81603000 43512000 38090000 1166 448 1244;1245 2678;2679;2680;2681 2209;2210 2210 524;1993;1994 2 KPYRIESDEEEDFENVGK PSEQESTKKPYRIESD EDFENVGKVGSPLDYS K K P G K V 0 1 1 2 0 0 5 1 0 1 0 2 0 1 1 1 0 0 1 1 0 0 18 2 2183.0019 Q96T23 Q96T23 1339 1356 RSF1 Remodeling and spacing factor 1 yes yes 3 0.0050408 58.635 By MS/MS By matching 1 1 2058600 1465200 593370 1167 1352 1246 2682;2683 2211 2211 1605 1 KQEGTPEGLYL SKENVLYKKQEGTPEG GTPEGLYL________ K K Q Y L - 0 0 0 0 0 1 2 2 0 0 2 1 0 0 1 0 1 0 1 0 0 0 11 1 1233.6241 P62191 P62191 430 440 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.0021316 74.165 By MS/MS By matching 1 1 1726200 1034100 692050 1168 1021 1247 2684;2685 2212 2212 2437 1 KQQQEPTGEPSPK KRGRGRPRKQQQEPTG PTGEPSPKRPRGRPKG R K Q P K R 0 0 0 0 0 3 2 1 0 0 0 2 0 0 3 1 1 0 0 0 0 0 13 1 1452.7209 P52926;F5H2U8;F5H2A4;F5H6H0 P52926 34 46 HMGA2 High mobility group protein HMGI-C yes no 2;3 2.2476E-37 158.89 By MS/MS By MS/MS 2 2 19622000 9318300 10304000 1169 1002 1248 2686;2687;2688;2689 2213;2214;2215;2216;2217;2218;2219;2220 2219 1148;2138 8 KQSFDDNDSEELEDKDSK KKKGQKGKKQSFDDND ELEDKDSKSKKTAKPK K K Q S K S 0 0 1 5 0 1 3 0 0 0 1 3 0 1 0 3 0 0 0 0 0 0 18 2 2127.908 A0A087WUT6;O60841 A0A087WUT6 105 122 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0015917 71.651 By MS/MS By MS/MS 2 2 23191000 13430000 9761200 1170 28 1249;1250 2690;2691;2692;2693 2221;2222 2222 25;26 2 KQSGSPTLDTAPNGR NFGKNIYRKQSGSPTL LDTAPNGRYGIGYLMA R K Q G R Y 1 1 1 1 0 1 0 2 0 0 1 1 0 0 2 2 2 0 0 0 0 0 15 1 1527.7641 Q9H2J7 Q9H2J7 697 711 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.0061103 55.98 By MS/MS By matching 1 1 1349900 826000 523920 1171 1395 1251 2694;2695 2223 2223 1682;1683 0 KQSLGELIGTLNAAK GNWKMNGRKQSLGELI IGTLNAAKVPADTEVV R K Q A K V 2 0 1 0 0 1 1 2 0 1 3 2 0 0 0 1 1 0 0 0 0 0 15 1 1541.8777 P60174 P60174 56 70 TPI1 Triosephosphate isomerase yes yes 2 0.0029649 65.477 By MS/MS By MS/MS 1 1 5798400 3744900 2053500 1172 1015 1252 2696;2697 2224;2225 2224 1161 2 KQSSSEISLAVER DEAWRQRRKQSSSEIS EISLAVERARRRREEE R K Q E R A 1 1 0 0 0 1 2 0 0 1 1 1 0 0 0 4 0 0 0 1 0 0 13 1 1432.7522 P48634 P48634 454 466 PRRC2A Protein PRRC2A yes yes 2 0.0036403 76.311 By matching By MS/MS 1 1 5887200 2995600 2891600 1173 973 1253 2698;2699 2226 2226 1112 1 KRSEGFSMDR PVKVERTRKRSEGFSM SEGFSMDRKVEKKKEP R K R D R K 0 2 0 1 0 0 1 1 0 0 0 1 1 1 0 2 0 0 0 0 0 0 10 2 1211.5717 Q7Z4V5;K7ERA4 Q7Z4V5 452 461 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 3 2.0319E-05 102.73 By MS/MS By MS/MS 2 2 12445000 7634800 4809800 1174 1221 1254;1255 2700;2701;2702;2703 2227;2228;2229 2229 219 1432 3 KRSPSPSPTPEAK KGGNYKKRKRSPSPSP PSPTPEAKKKNAKKGP R K R A K K 1 1 0 0 0 0 1 0 0 0 0 2 0 0 4 3 1 0 0 0 0 0 13 2 1380.7361 F8VXC8;Q8TAQ2 F8VXC8 300 312 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 5.248E-05 100.4 By matching By MS/MS 1 1 5986900 3210100 2776800 1175 523 1256 2704;2705 2230 2230 613;614 1 KRSSSEDAESLAPR PEVRTGKRKRSSSEDA DAESLAPRSKVKKIIQ R K R P R S 2 2 0 1 0 0 2 0 0 0 1 1 0 0 1 4 0 0 0 0 0 0 14 2 1531.759 H0YA82;Q4G0J3 H0YA82 77 90 LARP7 La-related protein 7 yes no 3 0.0068419 53.869 By MS/MS By matching 1 1 2021200 1233100 788120 1176 606 1257 2706;2707 2231 2231 725;726;727 0 KRSVQEGENPDDGVR EGMSKRKRKRSVQEGE ENPDDGVRGSPPEDYR R K R V R G 0 2 1 2 0 1 2 2 0 0 0 1 0 0 1 1 0 0 0 2 0 0 15 2 1684.8129 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 15 29 RBM34 RNA-binding protein 34 yes no 3 0.010964 53.038 By matching By MS/MS 1 1 2017300 1004700 1012600 1177 224 1258 2708;2709 2232 2232 278 1 KSASPEVSEGHENQHGQESEAK DEAWAFVRKSASPEVS HGQESEAKASKRLREP R K S A K A 2 0 1 0 0 2 5 2 2 0 0 2 0 0 1 4 0 0 0 1 0 0 22 1 2364.0578 O60930 O60930 73 94 RNASEH1 Ribonuclease H1 yes yes 4 0.00045084 54.74 By matching By MS/MS 1 1 6510100 2919500 3590700 1178 796 1259 2710;2711 2233 2233 932;933 1 KSFDHLISDTK TKKLLGTRKSFDHLIS DHLISDTKAPKRQEME R K S T K A 0 0 0 2 0 0 0 0 1 1 1 2 0 1 0 2 1 0 0 0 0 0 11 1 1289.6616 J3QSG6;H0Y465;P21359 J3QSG6 337 347 NF1 Neurofibromin;Neurofibromin truncated yes no 3 0.020077 58.268 By MS/MS 1 445020 445020 0 1179 585 1260 2712 2234 2234 699 1 KSLDSDESEDEEDDYQQK AGDPKKEKKSLDSDES EEDDYQQKRKGVEGLI K K S Q K R 0 0 0 5 0 2 4 0 0 0 1 2 0 0 0 3 0 0 1 0 0 0 18 1 2158.8662 Q13442 Q13442 56 73 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 3 0.019246 41.323 By MS/MS 1 0 0 0 1180 1084 1261 2713 2235 2235 1 KSLSDSESDDSK KEKDGTKRKSLSDSES DSESDDSKSKKKRDAA R K S S K S 0 0 0 3 0 0 1 0 0 0 1 2 0 0 0 5 0 0 0 0 0 0 12 1 1296.5681 Q13185;S4R2Y4 Q13185 92 103 CBX3 Chromobox protein homolog 3 yes no 2 3.6959E-06 106.76 By MS/MS By MS/MS 1 1 5996000 3185200 2810800 1181 1079 1262 2714;2715 2236;2237 2237 1243 2 KSLSDSESDDSKSK KEKDGTKRKSLSDSES ESDDSKSKKKRDAADK R K S S K K 0 0 0 3 0 0 1 0 0 0 1 3 0 0 0 6 0 0 0 0 0 0 14 2 1511.6951 Q13185;S4R2Y4 Q13185 92 105 CBX3 Chromobox protein homolog 3 yes no 3 0.015819 52.42 By MS/MS 1 2365600 0 2365600 1182 1079 1263 2716 2238 2238 1243 1 KSLSLSAK ISRPLEGKKSLSLSAK KSLSLSAKTHNIGFDK K K S A K T 1 0 0 0 0 0 0 0 0 0 2 2 0 0 0 3 0 0 0 0 0 0 8 1 832.50182 Q76FK4;F8WE42;F5H101 Q76FK4 680 687 NOL8 Nucleolar protein 8 yes no 2 0.0091107 63.306 By MS/MS 1 0 0 0 1183 1213 1264 2717 2239 2239 1418;1419 1 KSMSTQAPL KRKGLKVRKSMSTQAP SMSTQAPL________ R K S P L - 1 0 0 0 0 1 0 0 0 0 1 1 1 0 1 2 1 0 0 0 0 0 9 1 961.49027 A0A0G2JPF3;A0A0G2JNG8;Q8IUH8 A0A0G2JPF3 676 684 SPPL2C Signal peptide peptidase-like 2C yes no 2 0.012667 55.676 By MS/MS 1 0 0 0 1184 182 1265 2718 2240 2240 30 1 KSNLDEEVNVIPPHTPVR FETQRTPRKSNLDEEV IPPHTPVRTVMNTIQQ R K S V R T 0 1 2 1 0 0 2 0 1 1 1 1 0 0 3 1 1 0 0 3 0 0 18 1 2043.0749 P06400 P06400 359 376 RB1 Retinoblastoma-associated protein yes yes 3 0.002445 51.876 By matching By MS/MS 1 1 1948700 1395500 553150 1185 858 1266 2719;2720 2241;2242 2242 2099 2 KSPSDTEGLVK SPVKQAPRKSPSDTEG SDTEGLVKSLPSGSHQ R K S V K S 0 0 0 1 0 0 1 1 0 0 1 2 0 0 1 2 1 0 0 1 0 0 11 1 1159.6085 O95297 O95297 218 228 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.0011167 90.689 By matching By MS/MS 1 1 4039600 474750 3564800 1186 818 1267 2721;2722 2243 2243 966 1 KSSADTEFSDECTTAER SWRSNNSRKSSADTEF DECTTAERVLMKSPSP R K S E R V 2 1 0 2 1 0 3 0 0 0 0 1 0 1 0 3 3 0 0 0 0 0 17 1 1932.8007 Q9H6S0 Q9H6S0 1200 1216 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 3 0.0021705 72.583 By MS/MS By MS/MS 1 1 7175400 3529600 3645800 1187 1402 1268 2723;2724 2244;2245 2245 1692;2221 1 KSSPSVKPAVDPAAAK QLKLSITKKSSPSVKP AVDPAAAKLWTLSAND K K S A K L 4 0 0 1 0 0 0 0 0 0 0 3 0 0 3 3 0 0 0 2 0 0 16 2 1551.8621 H3BPG7;H3BV90;H3BT65;Q6FI81 H3BPG7 154 169 CIAPIN1 Anamorsin yes no 3 0.0028358 69.069 By MS/MS By matching 1 1 4860200 2744000 2116200 1188 648 1269 2725;2726 2246 2246 764 1 KTAHNSEADLEESFNEHELEPSSPK MVYCRKHKKTAHNSEA ELEPSSPKSKKKSRKG K K T P K S 2 0 2 1 0 0 6 0 2 0 2 2 0 1 2 4 1 0 0 0 0 0 25 1 2824.2788 Q8IWS0 Q8IWS0 133 157 PHF6 PHD finger protein 6 yes yes 4 1.601E-06 77.959 By MS/MS By MS/MS 1 1 3673800 2359100 1314600 1189 1243 1270 2727;2728 2247;2248 2248 1467;1468;1469 2 KTGSYGALAEITASK ATWRLGLRKTGSYGAL LAEITASKEGQKEKDT R K T S K E 3 0 0 0 0 0 1 2 0 1 1 2 0 0 0 2 2 0 1 0 0 0 15 1 1495.7882 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 442 456 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2;3 1.9557E-35 152.13 By MS/MS By MS/MS 2 2 14849000 8000100 6849400 1190 765 1271 2729;2730;2731;2732 2249;2250;2251 2250 891;2073;2382 3 KTSAVSSPLLDQQR SSASKKDRKTSAVSSP SPLLDQQRNSKTNQSK R K T Q R N 1 1 0 1 0 2 0 0 0 0 2 1 0 0 1 3 1 0 0 1 0 0 14 1 1528.8209 Q5T200;A0A087WX14 Q5T200 236 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 1.3867E-13 114.27 By MS/MS By MS/MS 1 1 1859600 1092500 767120 1191 1167 1272 2733;2734 2252;2253 2252 1365;1366 2 KTSQSEEEEAPR LDGAGKRRKTSQSEEE SEEEEAPRGHRGERPT R K T P R G 1 1 0 0 0 1 4 0 0 0 0 1 0 0 1 2 1 0 0 0 0 0 12 1 1389.6372 J3KSK6;Q7RTP6 J3KSK6 202 213 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes no 2 0.01113 64.64 By MS/MS By matching 1 1 991900 545230 446670 1192 712 1273 2735;2736 2254 2254 838 1 KTVTYEDPQAVGGLASALDNR GNSLAEQRKTVTYEDP LASALDNRKQSSEGTF R K T N R K 3 1 1 2 0 1 1 2 0 0 2 1 0 0 1 1 2 0 1 2 0 0 21 1 2204.1073 F5H3S6;B7Z2U2;Q6ZVM7 F5H3S6 252 272 TOM1L2 TOM1-like protein 2 yes no 2;3 0.0033401 55.173 By MS/MS By MS/MS 2 2 2208800 909360 1299400 1193 284 1274 2737;2738;2739;2740 2255;2256;2257 2257 1955 3 KVDSPFGPGSPSK GSGKHSSRKVDSPFGP FGPGSPSKGFFSRGPQ R K V S K G 0 0 0 1 0 0 0 2 0 0 0 2 0 1 3 3 0 0 0 1 0 0 13 1 1301.6616 F8WDA1;Q9UGJ0 F8WDA1 62 74 PRKAG2 5-AMP-activated protein kinase subunit gamma-2 yes no 2 0.0097879 50.659 By matching By MS/MS 1 1 821750 365160 456590 1194 538 1275 2741;2742 2258 2258 631;632 1 KVEEEQEADEEDVSEEEAESK SESAQPLKKVEEEQEA SEEEAESKEGTNKDFP K K V S K E 2 0 0 2 0 1 10 0 0 0 0 2 0 0 0 2 0 0 0 2 0 0 21 1 2437.014 Q9H3N1 Q9H3N1 234 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 3 6.1744E-17 98.133 By MS/MS By matching 1 1 126080000 58334000 67742000 1195 1396 1276 2743;2744 2259 2259 1684 1 KVELSESEEDKGGK PSPAPKPRKVELSESE SEEDKGGKMAAADSVQ R K V G K M 0 0 0 1 0 0 4 2 0 0 1 3 0 0 0 2 0 0 0 1 0 0 14 2 1533.7522 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 454 467 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0013012 69.379 By MS/MS By MS/MS 1 2 10653000 4666000 5986900 1196 247 1277 2745;2746;2747 2260;2261;2262 2260 306;307 3 KVEPVPVTKQPTPPSEAAASK DASKIPGKKVEPVPVT PSEAAASKKKPGQKKS K K V S K K 3 0 0 0 0 1 2 0 0 0 0 3 0 0 5 2 2 0 0 3 0 0 21 2 2160.179 Q86UP2 Q86UP2 142 162 KTN1 Kinectin yes yes 3 0.0088984 40.996 By MS/MS By matching 1 1 2454000 1427300 1026700 1197 1231 1278 2748;2749 2263 2263 2188 1 KVESLQEEIAFLK LARLDLERKVESLQEE QEEIAFLKKLHEEEIQ R K V L K K 1 0 0 0 0 1 3 0 0 1 2 2 0 1 0 1 0 0 0 1 0 0 13 1 1532.845 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 223 235 VIM Vimentin yes no 3 0.00068315 72.705 By MS/MS By matching 1 1 566520 411840 154680 1198 874 1279 2750;2751 2264 2264 1 KVLSPTAAKPSPFEGK GIKIKKKKKVLSPTAA KPSPFEGKTSTEPSTA K K V G K T 2 0 0 0 0 0 1 1 0 0 1 3 0 1 3 2 1 0 0 1 0 0 16 2 1655.9247 Q96QC0 Q96QC0 310 325 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 3 0.0078106 57.788 By MS/MS By matching 1 1 3316400 1969900 1346500 1199 1347 1280 2752;2753 2265 2265 1596 0 KVMDSDEDDDY TTVKFNRRKVMDSDED DSDEDDDY________ R K V D Y - 0 0 0 5 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 11 1 1330.4871 K7EQA1;O14737 K7EQA1 77 87 PDCD5 Programmed cell death protein 5 yes no 2 2.4777E-13 143.55 By MS/MS By MS/MS 2 2 56779000 30182000 26597000 1200 736 1281;1282 2754;2755;2756;2757 2266;2267;2268;2269;2270;2271;2272;2273 2273 111 856 8 KVPQVSTPTLVEVSR ALLVRYTKKVPQVSTP PTLVEVSRNLGKVGSK K K V S R N 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 2 0 0 4 0 0 15 1 1638.9305 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3;CON__P02769 A0A0C4DGB6 438 452 ALB Serum albumin no no 3 0.00035269 80.719 By MS/MS By MS/MS 1 1 2883600 2317000 566650 + 1201 152;353 1283 2758;2759 2274;2275 2274 2 KVSGVGGTTYEISV SPTRGGVKKVSGVGGT GTTYEISV________ K K V S V - 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 2 2 0 1 3 0 0 14 1 1395.7246 Q9C0B5;Q9ULC8 Q9C0B5 702 715 ZDHHC5;ZDHHC8 Palmitoyltransferase ZDHHC5;Probable palmitoyltransferase ZDHHC8 no no 2 0.0044688 57.174 By MS/MS By matching 1 1 4614200 2788000 1826100 1202 1384;1471 1284 2760;2761 2276 2276 2495 1 KVSSAEGAAKEEPK ________________ GAAKEEPKRRSARLSA R K V P K R 3 0 0 0 0 0 3 1 0 0 0 3 0 0 1 2 0 0 0 1 0 0 14 2 1429.7413 F2Z2W6;F2Z2Y5;H7BXJ5;P05114 F2Z2W6 5 18 HMGN1 Non-histone chromosomal protein HMG-14 yes no 2;3 0.0028804 76.068 By MS/MS By MS/MS 2 2 14013000 4639000 9373700 1203 481 1285 2762;2763;2764;2765 2277;2278;2279;2280 2277 566;567 4 KVVDYSQFQESDDADEDYGR MSRPVRNRKVVDYSQF DADEDYGRDSGPPTKK R K V G R D 1 1 0 5 0 2 2 1 0 0 0 1 0 1 0 2 0 0 2 2 0 0 20 1 2364.9982 Q9H1E3 Q9H1E3 9 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 0 224.12 By MS/MS By MS/MS 2 2 377730000 195350000 182380000 1204 1393 1286 2766;2767;2768;2769 2281;2282;2283;2284;2285 2285 1677 5 KVVDYSQFQESDDADEDYGRDSGPPTK MSRPVRNRKVVDYSQF RDSGPPTKKIRSSPRE R K V T K K 1 1 0 6 0 2 2 2 0 0 0 2 0 1 2 3 1 0 2 2 0 0 27 2 3047.3268 Q9H1E3 Q9H1E3 9 35 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 4 1.8931E-17 85.777 By MS/MS By MS/MS 1 1 11117000 6314400 4802200 1205 1393 1287 2770;2771 2286;2287 2287 1677 2 KVVEAVNSDSDSEFGIPK PKRAPKQKKVVEAVNS DSEFGIPKKTTTPKGK K K V P K K 1 0 1 2 0 0 2 1 0 1 0 2 0 1 1 3 0 0 0 3 0 0 18 1 1919.9476 Q02880 Q02880 1515 1532 TOP2B DNA topoisomerase 2-beta yes yes 2 0.010129 45.083 By MS/MS By MS/MS 1 1 3891400 2313300 1578100 1206 1044 1288 2772;2773 2288;2289 2288 1190;1191;1192 1 KVVVSPTK KAAATSAKKVVVSPTK KVVVSPTKKVAVATPA K K V T K K 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 70 NCL Nucleolin yes no 2 5.1453E-13 152.69 By MS/MS By MS/MS 2 1 92049000 66703000 25345000 1207 914 1289 2774;2775;2776 2290;2291;2292;2293 2291 1037;2114 4 KVVVSPTKK KAAATSAKKVVVSPTK VVVSPTKKVAVATPAK K K V K K V 0 0 0 0 0 0 0 0 0 0 0 3 0 0 1 1 1 0 0 3 0 0 9 2 984.63317 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 71 NCL Nucleolin yes no 2;3 3.8979E-23 155.33 By MS/MS By MS/MS 2 2 471530000 243700000 227830000 1208 914 1290 2777;2778;2779;2780 2294;2295;2296;2297 2296 1037;2114 4 KVYEDSGIPLPAESPK QIKATVKRKVYEDSGI PLPAESPKKGPKKVAS R K V P K K 1 0 0 1 0 0 2 1 0 1 1 2 0 0 3 2 0 0 1 1 0 0 16 1 1728.8934 F8W038;F8W1H0;H0YIS7;Q8IXM2 F8W038 83 98 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 2 0.0030008 60.949 By MS/MS 1 4008600 0 4008600 1209 526 1291 2781 2298 2298 616 1 KWDGSEEDEDNSK GKAQKSNKKWDGSEED EEDEDNSKKIKERSRI K K W S K K 0 0 1 3 0 0 3 1 0 0 0 2 0 0 0 2 0 1 0 0 0 0 13 1 1537.6169 A0A087WUT6;O60841 A0A087WUT6 160 172 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.011854 58.824 By MS/MS 1 1633400 0 1633400 1210 28 1292 2782 2299 2299 27 1 KWDGSEEDEDNSKK GKAQKSNKKWDGSEED EDEDNSKKIKERSRIN K K W K K I 0 0 1 3 0 0 3 1 0 0 0 3 0 0 0 2 0 1 0 0 0 0 14 2 1665.7118 A0A087WUT6;O60841 A0A087WUT6 160 173 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 0.0012295 82.709 By MS/MS By MS/MS 2 2 3406200 1694600 1711600 1211 28 1293 2783;2784;2785;2786 2300;2301 2301 27 1 KYVISDEEEEDDD DKANKKHKKYVISDEE DEEEEDDD________ K K Y D D - 0 0 0 4 0 0 4 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 13 1 1584.6315 Q8WVC0 Q8WVC0 654 666 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 0.0078974 64.798 By MS/MS By matching 1 1 31510000 17033000 14477000 1212 1289 1294 2787;2788 2302 2302 1522 1 KYYTNNFITNLTFR ILFDPDGRKYYTNNFI FITNLTFRTASLWIPG R K Y F R T 0 1 3 0 0 0 0 0 0 1 1 1 0 2 0 0 3 0 2 0 0 0 14 1 1793.9101 Q9UQC9 Q9UQC9 547 560 CLCA2 Calcium-activated chloride channel regulator 2;Calcium-activated chloride channel regulator 2, 109 kDa form;Calcium-activated chloride channel regulator 2, 35 kDa form yes yes 2 0.0080609 40.727 By MS/MS By matching 1 1 1924900 885610 1039300 1213 1489 1295 2789;2790 2303 2303 2237;2238 1 LAAAEETAVSPR RVWSLERRLAAAEETA EETAVSPRKSPRPAGP R L A P R K 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1213.6303 Q9BUH6 Q9BUH6 139 150 C9orf142 Protein PAXX yes yes 2 8.3844E-06 102.5 By MS/MS By MS/MS 1 1 20846000 10430000 10416000 1214 1367 1296 2791;2792 2304;2305 2304 1632 2 LAAPSVSHVSPR QTSERANKLAAPSVSH SVSHVSPRKNPSVVIK K L A P R K 2 1 0 0 0 0 0 0 1 0 1 0 0 0 2 3 0 0 0 2 0 0 12 0 1219.6673 A0A0U1RRM7;A0A0U1RQW3;Q8WXE1 A0A0U1RRM7 122 133 ATRIP ATR-interacting protein yes no 2;3 0.00056184 83.633 By MS/MS By MS/MS 2 2 7392900 3841300 3551700 1215 199 1297 2793;2794;2795;2796 2306;2307;2308 2307 248;249 3 LAAVTYNGVDNNK YENYRSRKLAAVTYNG YNGVDNNKNKGQLTKS K L A N K N 2 0 3 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 1 2 0 0 13 0 1377.6888 G3V1Q4;E7ES33;E7EPK1;Q16181 G3V1Q4 278 290 SEPT7 Septin-7 yes no 2 0.014949 56.043 By MS/MS By matching 1 1 948130 531340 416790 1216 405 1298 2797;2798 2309 2309 0 LAEDEGDSEPEAVGQSR KRKKFPDRLAEDEGDS PEAVGQSRGRRQKK__ R L A S R G 2 1 0 2 0 1 4 2 0 0 1 0 0 0 1 2 0 0 0 1 0 0 17 0 1787.781 Q9UIG0 Q9UIG0 1461 1477 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2;3 7.1953E-08 98.552 By MS/MS By MS/MS 2 2 26050000 13640000 12411000 1217 1459 1299 2799;2800;2801;2802 2310;2311 2311 1765 2 LAEQFVLLNLVYETTDK AENKEIQKLAEQFVLL LVYETTDKHLSPDGQY K L A D K H 1 0 1 1 0 1 2 0 0 0 4 1 0 1 0 0 2 0 1 2 0 0 17 0 1995.0565 C9J3E2;B5MC07;O95994;H7C3Z9 C9J3E2 100 116 AGR2 Anterior gradient protein 2 homolog yes no 2;3 4.3952E-69 161.99 By MS/MS 2 21680000 0 21680000 1218 275 1300 2803;2804 2312;2313 2313 2 LAIQGPEDSPSR RRAEGPPRLAIQGPED GPEDSPSRQSRRYDW_ R L A S R Q 1 1 0 1 0 1 1 1 0 1 1 0 0 0 2 2 0 0 0 0 0 0 12 0 1268.6361 Q15773 Q15773 230 241 MLF2 Myeloid leukemia factor 2 yes yes 2 0.0016108 80.371 By MS/MS By MS/MS 1 1 9090000 4896100 4193900 1219 1133 1301 2805;2806 2314;2315 2315 1321;1322 2 LAIQGPEDSPSRQSR RRAEGPPRLAIQGPED DSPSRQSRRYDW____ R L A S R R 1 2 0 1 0 2 1 1 0 1 1 0 0 0 2 3 0 0 0 0 0 0 15 1 1639.8278 Q15773 Q15773 230 244 MLF2 Myeloid leukemia factor 2 yes yes 3 0.017498 43.305 By MS/MS By matching 1 1 1326000 576940 749020 1220 1133 1302 2807;2808 2316 2316 1321;1322 1 LALDLEIATYR YQELMNTKLALDLEIA DLEIATYRTLLEGEES K L A Y R T 2 1 0 1 0 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 11 0 1276.7027 CON__P04264;P04264 CON__P04264 473 483 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.0013755 84.213 By MS/MS By MS/MS 2 2 1969600 1156600 812970 + 1221 354 1303 2809;2810;2811;2812 2317;2318;2319;2320;2321 2319 4 LAPSPARPR VPASFFRRLAPSPARP APSPARPRHPAEAPNN R L A P R H 2 2 0 0 0 0 0 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 9 1 963.5614 O14654 O14654 436 444 IRS4 Insulin receptor substrate 4 yes yes 2 0.018556 66.663 By matching By MS/MS 1 1 15643000 9155300 6487800 1222 761 1304 2813;2814 2322 2322 1 LAPVPSPEPQKPAPVSPESVK VPVCESQKLAPVPSPE PVSPESVKATLSNPKP K L A V K A 2 0 0 0 0 1 2 0 0 0 1 2 0 0 7 3 0 0 0 3 0 0 21 1 2153.1732 Q96JM3 Q96JM3 199 219 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.0025355 65.022 By MS/MS By MS/MS 2 1 15371000 9390300 5981000 1223 1338 1305;1306 2815;2816;2817 2323;2324;2325;2326 2326 1585;1586 4 LAQMCGLHIVVHADELEELINYYQDR CVDGKEFRLAQMCGLH LINYYQDRGYFEELIT R L A D R G 2 1 1 2 1 2 3 1 2 2 4 0 1 0 0 0 0 0 2 2 0 0 26 0 3128.5059 A0A087WVQ6;Q00610;J3KS13 A0A087WVQ6 1272 1297 CLTC Clathrin heavy chain;Clathrin heavy chain 1 yes no 4 0.0020391 60.939 By MS/MS 1 1530100 0 1530100 1224 36 1307 2818 2327 2327 3 1 LASDDRPSPPR HTSMDLPKLASDDRPS DDRPSPPRGLVAAYSG K L A P R G 1 2 0 2 0 0 0 0 0 0 1 0 0 0 3 2 0 0 0 0 0 0 11 1 1209.6102 A0A0A0MR66;P98175 A0A0A0MR66 781 791 RBM10 RNA-binding protein 10 yes no 2 5.82E-06 107.34 By matching By MS/MS 1 1 8287400 4729700 3557700 1225 96 1308 2819;2820 2328 2328 120 1 LASPELER SPDVGLLKLASPELER LASPELERLIIQSSNG K L A E R L 1 1 0 0 0 0 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 8 0 913.4869 P05412;P17535 P05412 71 78 JUN;JUND Transcription factor AP-1;Transcription factor jun-D yes no 2 0.010007 84.817 By MS/MS By MS/MS 1 1 16813000 8771400 8042100 1226 854 1309 2821;2822 2329;2330;2331;2332 2329 984 4 LASPMKPVPGTPPSSK RPPGGSDKLASPMKPV PGTPPSSKAKSPISSG K L A S K A 1 0 0 0 0 0 0 1 0 0 1 2 1 0 5 3 1 0 0 1 0 0 16 1 1592.8596 Q15648 Q15648 1205 1220 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.0017137 73.498 By MS/MS By matching 1 1 1674700 864150 810560 1227 1129 1310 2823;2824 2333 2333 1315;2163 1 LASTSDIEEK VAPTIPRRLASTSDIE STSDIEEKENRDSSSL R L A E K E 1 0 0 1 0 0 2 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 10 0 1091.5346 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 505 514 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.0035602 70.728 By matching By MS/MS 1 1 2086700 1002300 1084500 1228 765 1311 2825;2826 2334 2334 892;893 1 LASTSDIEEKENR VAPTIPRRLASTSDIE DIEEKENRDSSSLRTS R L A N R D 1 1 1 1 0 0 3 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 13 1 1490.7213 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 505 517 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.00068443 94.122 By MS/MS By MS/MS 1 1 5483800 2863100 2620700 1229 765 1312 2827;2828 2335;2336 2336 892;893 2 LATKSSPVKVGEK SAMKVGEKLATKSSPV SPVKVGEKRKAADETL K L A E K R 1 0 0 0 0 0 1 1 0 0 1 3 0 0 1 2 1 0 0 2 0 0 13 2 1342.782 P49916 P49916 908 920 LIG3 DNA ligase 3 yes yes 3 0.0048769 70.54 By matching By MS/MS 1 1 2350700 1246600 1104100 1230 985 1313 2829;2830 2337 2337 1132 1 LATNTSAPDLK STTPRLSRLATNTSAP NTSAPDLKNVRSKVGS R L A L K N 2 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1129.5979 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4;B5MEG9 E7EVA0 2068 2078 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 1.3151E-05 113.99 By MS/MS By MS/MS 1 1 5652800 2836400 2816500 1231 427 1314 2831;2832 2338;2339 2338 499 2 LAVEALSSLDGDLAGR GERRAIEKLAVEALSS LDGDLAGRYYALKSMT K L A G R Y 3 1 0 2 0 0 1 2 0 0 4 0 0 0 0 2 0 0 0 1 0 0 16 0 1585.8312 G3V4N7;P12277 G3V4N7 157 172 CKB Creatine kinase B-type yes no 2 0.0026113 65.842 By MS/MS By matching 1 1 639050 428750 210300 1232 560 1315 2833;2834 2340 2340 1 LCDDGPQLPTSPR VSREPRLRLCDDGPQL PQLPTSPRLTAAARSA R L C P R L 0 1 0 2 1 1 0 1 0 0 2 0 0 0 3 1 1 0 0 0 0 0 13 0 1454.6824 H0YAZ3;H0YB51;O60504 H0YAZ3 32 44 SORBS3 Vinexin yes no 2 0.0022947 89.231 By matching By MS/MS 1 1 13043000 6706100 6337000 1233 608 1316 2835;2836 2341 2341 730;2042 1 LCDFGSASHVADNDITPYLVSR NESKTILKLCDFGSAS ITPYLVSRFYRAPEII K L C S R F 2 1 1 3 1 0 0 1 1 1 2 0 0 1 1 3 1 0 1 2 0 0 22 0 2436.138 Q13523;H0YDJ3 Q13523 832 853 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 3 0.0065633 43.115 By MS/MS By MS/MS 1 1 5745100 3740300 2004700 1234 1085 1317 2837;2838 2342;2343 2342 2448 2 LCYVALDFEQEMATAASSSSLEK IVRDIKEKLCYVALDF ASSSSLEKSYELPDGQ K L C E K S 4 0 0 1 1 1 3 0 0 0 3 1 1 1 0 4 1 0 1 1 0 0 23 0 2549.1666 P63261;P60709;I3L4N8;Q6S8J3 P63261 216 238 ACTG1;ACTB;POTEE Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E yes no 2;3 0.00043484 90.367 By MS/MS By MS/MS 1 2 25060000 13260000 11800000 1235 1017 1318 2839;2840;2841 2344;2345;2346 2344 3 LDGENIYIR AWKKKRERLDGENIYI DGENIYIRHSNLMLED R L D I R H 0 1 1 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 9 0 1091.5611 Q4VB86;P11171 Q4VB86 412 420 EPB41 Protein 4.1 yes no 2 9.0806E-05 103.83 By MS/MS By MS/MS 1 1 13332000 6669900 6662100 1236 887 1319 2842;2843 2347;2348 2347 2398 2 LDIDSPPITAR TFLEHMCRLDIDSPPI DSPPITARNTGIICTI R L D A R N 1 1 0 2 0 0 0 0 0 2 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1196.6401 B4DNK4;P14618;H3BTN5;H3BQ34;H3BN34;H3BQZ3;H3BU13;H3BT25;H3BUW1;H3BTJ2 B4DNK4 33 43 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 0.0149 54.023 By MS/MS 1 1418200 1418200 0 1237 266 1320 2844 2349 2349 1 LDLAAYDQEGRR VSSHRNPRLDLAAYDQ AYDQEGRRFDNFSSLS R L D R R F 2 2 0 2 0 1 1 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 12 1 1405.695 Q8TEM1 Q8TEM1 787 798 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 3 0.017222 33.542 By MS/MS 1 1151100 1151100 0 1238 1286 1321 2845 2350 2350 0 LDQPVSAPPSPR EKRILQEKLDQPVSAP VSAPPSPRDISMEIDS K L D P R D 1 1 0 1 0 1 0 0 0 0 1 0 0 0 4 2 0 0 0 1 0 0 12 0 1262.6619 Q16204 Q16204 235 246 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 0.0012217 81.448 By MS/MS By MS/MS 2 2 15212000 9013200 6198800 1239 1135 1322;1323 2846;2847;2848;2849 2351;2352;2353;2354;2355;2356 2354 1323;1324 6 LDSQPQETSPELPR HVTEGIPRLDSQPQET ETSPELPRRRVRHQGD R L D P R R 0 1 0 1 0 2 2 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 14 0 1595.7791 O14545 O14545 407 420 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2;3 2.7244E-20 139.86 By MS/MS By MS/MS 3 3 24815000 11936000 12879000 1240 759 1324;1325 2850;2851;2852;2853;2854;2855 2357;2358;2359;2360;2361 2357 886 5 LDSSPSVSSTLAAK QASKATPKLDSSPSVS VSSTLAAKDDPDGKQE K L D A K D 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 1 0 0 14 0 1361.7038 J3KQ96;E7ETY2;Q13428 J3KQ96 1187 1200 TCOF1 Treacle protein yes no 2 7.0047E-05 97.813 By MS/MS By MS/MS 1 1 8037300 3711900 4325400 1241 422 1326 2856;2857 2362;2363 2363 484 2 LDSSPVSSPR FGPNKMMRLDSSPVSS SSPVSSPRKHSAELIA R L D P R K 0 1 0 1 0 0 0 0 0 0 1 0 0 0 2 4 0 0 0 1 0 0 10 0 1043.5247 O60293 O60293 946 955 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 2.5985E-05 87.667 By MS/MS 1 0 0 0 1242 787 1327 2858 2364 2364 919 1 LDYCGGSGEPGGVQR RKLRAMCRLDYCGGSG GEPGGVQRAFSASSAS R L D Q R A 0 1 0 1 1 1 1 5 0 0 1 0 0 0 1 1 0 0 1 1 0 0 15 0 1550.6784 Q15464 Q15464 112 126 SHB SH2 domain-containing adapter protein B yes yes 2 0.0026807 60.49 By MS/MS By MS/MS 1 1 2301200 1436300 864940 1243 1124 1328 2859;2860 2365;2366 2366 2459 2 LEASTSDPLPAR PGSNRKLRLEASTSDP TSDPLPARGGSALPGS R L E A R G 2 1 0 1 0 0 1 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 12 0 1255.6408 A5PKW4 A5PKW4 151 162 PSD PH and SEC7 domain-containing protein 1 yes yes 2 0.0019675 76.17 By MS/MS By MS/MS 1 1 1928900 985770 943130 1244 229 1329 2861;2862 2367;2368 2367 282;1941 2 LEELENLVSSLR DVKELLSRLEELENLV ENLVSSLREQCTAGAG R L E L R E 0 1 1 0 0 0 3 0 0 0 4 0 0 0 0 2 0 0 0 1 0 0 12 0 1400.7511 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 126 137 TNC Tenascin yes no 2 1.83E-08 121.6 By MS/MS By MS/MS 1 1 2329500 1596100 733390 1245 435 1330 2863;2864 2369;2370 2369 2 LEEPPELNRQSPNPR LVPNGFSKLEEPPELN NRQSPNPRRGHAVPPT K L E P R R 0 2 2 0 0 1 3 0 0 0 2 0 0 0 4 1 0 0 0 0 0 0 15 1 1774.8962 Q7Z5L9 Q7Z5L9 165 179 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.0013153 67.118 By MS/MS By MS/MS 1 1 26534000 15322000 11212000 1246 1223 1331 2865;2866 2371;2372;2373 2371 1435 3 LEGLTDEINFLR NKVELESRLEGLTDEI TDEINFLRQLYEKEIR R L E L R Q 0 1 1 1 0 0 2 1 0 1 3 0 0 1 0 0 1 0 0 0 0 0 12 0 1418.7405 CON__H-INV:HIT000292931;CON__P05787;P05787;F8VP67;F8VUG2;F8W1U3 CON__H-INV:HIT000292931 174 185 KRT8 Keratin, type II cytoskeletal 8 yes no 2 0.0012689 92.239 By MS/MS By MS/MS 1 1 1458100 856500 601630 + 1247 349 1332 2867;2868 2374;2375 2374 2 LEHLYLNNNSIEK SVPAINNRLEHLYLNN LNNNSIEKINGTQICP R L E E K I 0 0 3 0 0 0 2 0 1 1 3 1 0 0 0 1 0 0 1 0 0 0 13 0 1585.81 P51888 P51888 313 325 PRELP Prolargin yes yes 3 0.0040645 38.199 By MS/MS 1 1014100 1014100 0 1248 997 1333 2869 2376 2376 1 LENLLLLDLQHNR IPPGVFSKLENLLLLD LLDLQHNRLSDGVFKP K L E N R L 0 1 2 1 0 1 1 0 1 0 6 0 0 0 0 0 0 0 0 0 0 0 13 0 1589.8889 P51888 P51888 194 206 PRELP Prolargin yes yes 3 6.2252E-10 108.68 By MS/MS By matching 1 1 3793300 2745000 1048300 1249 997 1334 2870;2871 2377 2377 1 LETEASNMKEVLK DNSNHLTKLETEASNM SNMKEVLKQLQGSIED K L E L K Q 1 0 1 0 0 0 3 0 0 0 2 2 1 0 0 1 1 0 0 1 0 0 13 1 1490.765 P25054;E9PFT7;D6RFL6;E7EMH9 P25054 37 49 APC Adenomatous polyposis coli protein yes no 2 0.019526 42.395 By MS/MS 1 0 0 0 1250 929 1335 2872 2378 2378 1 LEVSYQGLDIENQR ASFKKTERLEVSYQGL GLDIENQRLQKTLENS R L E Q R L 0 1 1 1 0 2 2 1 0 1 2 0 0 0 0 1 0 0 1 1 0 0 14 0 1662.8213 A0A087WXD9;Q3V6T2 A0A087WXD9 679 692 CCDC88A Girdin yes no 2 0.010419 41.283 By MS/MS By matching 1 1 587810 373710 214110 1251 50 1336 2873;2874 2379 2379 58;2260 1 LEVTEIVKPSPK SSSMKISKLEVTEIVK EIVKPSPKRKMEPDTE K L E P K R 0 0 0 0 0 0 2 0 0 1 1 2 0 0 2 1 1 0 0 2 0 0 12 1 1338.7759 Q7Z6E9 Q7Z6E9 1170 1181 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 2 0.0057085 70.889 By MS/MS By matching 1 1 3108500 1747800 1360700 1252 1225 1337 2875;2876 2380 2380 1439 1 LFAVAPNQNLK RAREEGIRLFAVAPNQ VAPNQNLKEQGLRDIA R L F L K E 2 0 2 0 0 1 0 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 11 0 1213.6819 P12110 P12110 187 197 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.015432 60.973 By MS/MS 1 1323300 1323300 0 1253 893 1338 2877 2381 2381 1 LFIGGLSFETTDESLR KEPEQLRKLFIGGLSF ETTDESLRSHFEQWGT K L F L R S 0 1 0 1 0 0 2 2 0 1 3 0 0 2 0 2 2 0 0 0 0 0 16 0 1783.8992 F8W6I7;P09651;F8VTQ5;F8W646;F8VZ49;Q32P51 F8W6I7 16 31 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 0.018001 48.659 By matching By MS/MS 1 1 3281700 1917000 1364700 1254 527 1339 2878;2879 2382 2382 1 LFIGGLSFETTEESLR REKEQFRKLFIGGLSF ETTEESLRNYYEQWGK K L F L R N 0 1 0 0 0 0 3 2 0 1 3 0 0 2 0 2 2 0 0 0 0 0 16 0 1797.9149 A0A087WUI2;P22626 A0A087WUI2 23 38 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.0026201 73.466 By MS/MS 1 2766300 2766300 0 1255 27 1340 2880 2383 2383 1 LFQQIYSDGSDEVKR EGDAALNRLFQQIYSD DGSDEVKRAMNKSFME R L F K R A 0 1 0 2 0 2 1 1 0 1 1 1 0 1 0 2 0 0 1 1 0 0 15 1 1783.8741 Q9Y2Z0 Q9Y2Z0 312 326 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2;3 9.1699E-06 97.631 By MS/MS By matching 2 1 5093300 3731100 1362200 1256 1503 1341 2881;2882;2883 2384;2385 2384 1845;2515 2 LFRPPSPAPAAPGAR PAGSRSGRLFRPPSPA APAAPGARLLRLPGSG R L F A R L 4 2 0 0 0 0 0 1 0 0 1 0 0 1 5 1 0 0 0 0 0 0 15 1 1503.831 Q86U90 Q86U90 32 46 YRDC YrdC domain-containing protein, mitochondrial yes yes 3 0.0081269 49.537 By MS/MS By matching 1 1 7495600 4379400 3116300 1257 1229 1342 2884;2885 2386 2386 1444 1 LFSQGQDVSNK LTFKERQRLFSQGQDV QGQDVSNKVKASRKLT R L F N K V 0 0 1 1 0 2 0 1 0 0 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1221.599 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1754 1764 MLLT4 Afadin yes no 2 0.00063174 93.766 By MS/MS By MS/MS 1 1 22292000 13207000 9085000 1258 242 1343 2886;2887 2387;2388 2388 296 2 LFSQGQDVSNKVK LTFKERQRLFSQGQDV QDVSNKVKASRKLTEL R L F V K A 0 0 1 1 0 2 0 1 0 0 1 2 0 1 0 2 0 0 0 2 0 0 13 1 1448.7623 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1754 1766 MLLT4 Afadin yes no 2 2.7931E-09 111.83 By MS/MS 1 6361000 6361000 0 1259 242 1344 2888 2389 2389 296 1 LFYADHPFIFLVR REELRSPKLFYADHPF HPFIFLVRDTQSGSLL K L F V R D 1 1 0 1 0 0 0 0 1 1 2 0 0 3 1 0 0 0 1 1 0 0 13 0 1636.8766 P50454;E9PKH2;H0YEP8 P50454 381 393 SERPINH1 Serpin H1 yes no 3 0.00026929 83.182 By MS/MS By MS/MS 1 2 2046300 1566200 480110 1260 988 1345 2889;2890;2891 2390;2391 2390 2 LGAAPEEESAYVAGEK PFAGGGYRLGAAPEEE SAYVAGEKRQHSSQDV R L G E K R 4 0 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 16 0 1619.7679 F2Z2K0;Q9UNZ2 F2Z2K0 157 172 NSFL1C NSFL1 cofactor p47 yes no 2 1.2819E-10 105.36 By MS/MS By MS/MS 1 1 7747500 3494700 4252700 1261 479 1346 2892;2893 2392;2393;2394;2395 2393 2338 4 LGAAPEEESAYVAGEKR PFAGGGYRLGAAPEEE AYVAGEKRQHSSQDVH R L G K R Q 4 1 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 17 1 1775.869 F2Z2K0;Q9UNZ2 F2Z2K0 157 173 NSFL1C NSFL1 cofactor p47 yes no 2;3 5.663E-20 118.2 By MS/MS By MS/MS 2 2 100980000 59220000 41755000 1262 479 1347 2894;2895;2896;2897 2396;2397;2398;2399 2397 2338 4 LGAGEGGEASVSPEK PRSKKKKKLGAGEGGE EASVSPEKTSTTSKGK K L G E K T 2 0 0 0 0 0 3 4 0 0 1 1 0 0 1 2 0 0 0 1 0 0 15 0 1386.6627 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1343 TCOF1 Treacle protein yes no 2 7.6851E-58 159.64 By MS/MS By MS/MS 1 1 11899000 6478200 5420600 1263 422 1348 2898;2899 2400;2401 2401 482 2 LGAGEGGEASVSPEKTSTTSK PRSKKKKKLGAGEGGE EKTSTTSKGKAKRDKA K L G S K G 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 4 3 0 0 1 0 0 21 1 1991.9647 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1349 TCOF1 Treacle protein yes no 3 2.8829E-06 82.294 By MS/MS By MS/MS 1 1 56575000 34355000 22220000 1264 422 1349 2900;2901 2402;2403 2402 482 2 LGAGEGGEASVSPEKTSTTSKGK PRSKKKKKLGAGEGGE TSTTSKGKAKRDKASG K L G G K A 2 0 0 0 0 0 3 5 0 0 1 3 0 0 1 4 3 0 0 1 0 0 23 2 2177.0812 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1351 TCOF1 Treacle protein yes no 3 0.0020015 55.337 By matching By MS/MS 1 1 4767300 2215700 2551600 1265 422 1350 2902;2903 2404 2404 482 1 LGAGGGSPEKSPSAQELK EEKEGGARLGAGGGSP SPSAQELKEQGNRLFV R L G L K E 2 0 0 0 0 1 2 4 0 0 2 2 0 0 2 3 0 0 0 0 0 0 18 1 1711.8741 H3BS86;Q9UNE7 H3BS86 13 30 STUB1 E3 ubiquitin-protein ligase CHIP yes no 2;3 5.0052E-11 97.621 By MS/MS By MS/MS 3 3 189350000 98019000 91333000 1266 660 1351;1352 2904;2905;2906;2907;2908;2909 2405;2406;2407;2408;2409 2409 776;777 5 LGAGGGSPEKSPSAQELKEQGNR EEKEGGARLGAGGGSP ELKEQGNRLFVGRKYP R L G N R L 2 1 1 0 0 2 3 5 0 0 2 2 0 0 2 3 0 0 0 0 0 0 23 2 2296.1408 H3BS86;Q9UNE7 H3BS86 13 35 STUB1 E3 ubiquitin-protein ligase CHIP yes no 3 1.8031E-37 117.11 By MS/MS By matching 1 1 51571000 39113000 12458000 1267 660 1353 2910;2911 2410 2410 776;777 1 LGASNSPGQPNSVK PKIGLSLKLGASNSPG PGQPNSVKRKKLPVDS K L G V K R 1 0 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 14 0 1354.6841 P49756 P49756 672 685 RBM25 RNA-binding protein 25 yes yes 2 0 228.11 By MS/MS By MS/MS 2 2 39095000 23129000 15966000 1268 979 1354;1355 2912;2913;2914;2915 2411;2412;2413;2414 2411 1120 4 LGASNSPGQPNSVKR PKIGLSLKLGASNSPG GQPNSVKRKKLPVDSV K L G K R K 1 1 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 15 1 1510.7852 P49756 P49756 672 686 RBM25 RNA-binding protein 25 yes yes 2;3 5.0944E-14 116.04 By MS/MS By MS/MS 2 2 12770000 5997600 6772400 1269 979 1356 2916;2917;2918;2919 2415;2416;2417 2416 1120 3 LGDSSLSR RRREEERRLGDSSLSR LGDSSLSRKDSRWGDR R L G S R K 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 0 0 0 8 0 833.4243 Q14152 Q14152 878 885 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.004594 96.143 By MS/MS By MS/MS 2 2 1765900 584400 1181500 1270 1094 1357 2920;2921;2922;2923 2418;2419;2420;2421;2422;2423 2419 1260;1261 6 LGDVYVNDAFGTAHR AFRASLSKLGDVYVND DAFGTAHRAHSSMVGV K L G H R A 2 1 1 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 1 2 0 0 15 0 1633.7849 P07205;P00558 P07205 157 171 PGK2;PGK1 Phosphoglycerate kinase 2;Phosphoglycerate kinase 1 yes no 3 0.0061365 58.071 By MS/MS 1 369830 369830 0 1271 832 1358 2924 2424 2424 1 LGEASDSELADADK TSLLRRARLGEASDSE SELADADKASVASEVS R L G D K A 3 0 0 3 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 14 0 1419.6365 H0Y2V6;Q5SW79 H0Y2V6 1072 1085 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0010788 81.128 By MS/MS By MS/MS 1 1 3417000 1616400 1800600 1272 578 1359 2925;2926 2425;2426 2425 688 2 LGEHNIDVLEGNEQFINAAK YKSRIQVRLGEHNIDV EQFINAAKIITHPNFN R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 3 5.7857E-09 73.448 By matching By MS/MS 1 1 27411000 16860000 10551000 + 1273 350 1360 2927;2928 2427 2427 1 LGELVVGPYDNTVVLEELR HPTGDDRRLGELVVGP TVVLEELRAGTTYKVN R L G L R A 0 1 1 1 0 0 3 2 0 0 4 0 0 0 1 0 1 0 1 4 0 0 19 0 2114.1259 D6RGG3;Q99715 D6RGG3 1130 1148 COL12A1 Collagen alpha-1(XII) chain yes no 2 5.7562E-07 88.092 By MS/MS By MS/MS 1 1 12519000 7797000 4721500 1274 379 1361 2929;2930 2428;2429 2429 2 LGEYEDVSR VIDHSGARLGEYEDVS GEYEDVSRVEKYTISQ R L G S R V 0 1 0 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1066.4931 K7EP07;K7EK42;Q99426;K7EL99 K7EP07 44 52 TBCB Tubulin-folding cofactor B yes no 2 0.0020446 120.87 By MS/MS By MS/MS 1 1 15010000 9215800 5794500 1275 727 1362 2931;2932 2430;2431 2430 2371 2 LGEYEDVSRVEK VIDHSGARLGEYEDVS EDVSRVEKYTISQEAY R L G E K Y 0 1 0 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 1 2 0 0 12 1 1422.6991 K7EP07;K7EK42;Q99426 K7EP07 44 55 TBCB Tubulin-folding cofactor B yes no 2;3 6.797E-77 174.57 By MS/MS By MS/MS 2 2 40942000 24601000 16340000 1276 727 1363 2933;2934;2935;2936 2432;2433;2434;2435 2432 2371 4 LGGLRPESPESLTSVSR TPLRRSRRLGGLRPES ESLTSVSRTRRALVEF R L G S R T 0 2 0 0 0 0 2 2 0 0 3 0 0 0 2 4 1 0 0 1 0 0 17 1 1783.9428 Q9H6F5;H0YG79 Q9H6F5 11 27 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 0.004908 52.464 By MS/MS By matching 1 1 14086000 7197900 6888500 1277 1400 1364 2937;2938 2436 2436 1689 1 LGHGDNTTQLK WGLGEYGRLGHGDNTT GDNTTQLKPKMVKVLL R L G L K P 0 0 1 1 0 1 0 2 1 0 2 1 0 0 0 0 2 0 0 0 0 0 11 0 1182.5993 A0A0J9YVP0;O95714 A0A0J9YVP0 378 388 HERC2 E3 ubiquitin-protein ligase HERC2 yes no 2 0.012897 52.255 By matching By MS/MS 1 1 1566000 680030 885930 1278 184 1365 2939;2940 2437 2437 0 LGLFVFSQEMVYFSDLK DQTYAGGRLGLFVFSQ MVYFSDLKYECRDI__ R L G L K Y 0 0 0 1 0 1 1 1 0 0 3 1 1 3 0 2 0 0 1 2 0 0 17 0 2022.0172 P35442 P35442 1150 1166 THBS2 Thrombospondin-2 yes yes 2 0.003215 56.122 By MS/MS By MS/MS 1 1 4629400 2734700 1894700 1279 949 1366 2941;2942 2438;2439 2439 165 2 LGLGTLSSSLSR ACCRDYQRLGLGTLSS TLSSSLSRAKSEPFRI R L G S R A 0 1 0 0 0 0 0 2 0 0 4 0 0 0 0 4 1 0 0 0 0 0 12 0 1189.6667 G5E933;O95248 G5E933 1134 1145 SBF1 Myotubularin-related protein 5 yes no 2 6.5779E-09 117.2 By MS/MS By MS/MS 2 2 4186200 2329400 1856900 1280 571 1367 2943;2944;2945;2946 2440;2441;2442 2440 671;672;673;2027 3 LGMLSPEGTCK NTSVQFLRLGMLSPEG LSPEGTCKAFDTAGNG R L G C K A 0 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 1 0 0 0 0 0 11 0 1191.5628 A0A0U1RQF0;P49327 A0A0U1RQF0 203 213 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 0.0063184 65.695 By MS/MS By MS/MS 2 2 3379300 1972700 1406600 1281 194 1368;1369 2947;2948;2949;2950 2443;2444 2444 31 244 2 LGQDRFQSYISR ALQQIGERLGQDRFQS RFQSYISRLPSALRRH R L G S R L 0 2 0 1 0 2 0 1 0 1 1 0 0 1 0 2 0 0 1 0 0 0 12 1 1468.7423 G3XAE9;Q9Y4F4 G3XAE9 287 298 FAM179B Protein FAM179B yes no 2 0.015245 45.257 By MS/MS 1 0 0 0 1282 568 1370 2951 2445 2445 2351 1 LGRGSVSDCSDGTSELEEPLGEDPR FSAVVARRLGRGSVSD EPLGEDPRARPPGPPD R L G P R A 0 2 0 3 1 0 4 4 0 0 3 0 0 0 2 4 1 0 0 1 0 0 25 1 2661.1824 P50548 P50548 181 205 ERF ETS domain-containing transcription factor ERF yes yes 3 3.7671E-07 59.547 By MS/MS By matching 1 1 1941400 1071500 869880 1283 989 1371 2952;2953 2446 2446 1135 0 LGSFEGLVNLTFIHLQHNR LTHNKITKLGSFEGLV FIHLQHNRLKEDAVSA K L G N R L 0 1 2 0 0 1 1 2 2 1 4 0 0 2 0 1 1 0 0 1 0 0 19 0 2194.1647 P51884 P51884 152 170 LUM Lumican yes yes 3;4 6.7257E-56 152.94 By MS/MS By MS/MS 2 2 17706000 9047500 8658800 1284 996 1372 2954;2955;2956;2957 2447;2448;2449;2450;2451 2448 15 5 LGSFGSITR GDFLGRERLGSFGSIT GSFGSITRQQEGEASS R L G T R Q 0 1 0 0 0 0 0 2 0 1 1 0 0 1 0 2 1 0 0 0 0 0 9 0 936.50288 Q14315 Q14315 2231 2239 FLNC Filamin-C yes yes 2 0.0073679 70.412 By MS/MS By MS/MS 1 1 11319000 5650900 5668500 1285 1100 1373 2958;2959 2452;2453;2454 2453 1274 3 LGSLSARSDSEATISR LAQPRRTRLGSLSARS DSEATISRSSASSRTA R L G S R S 2 2 0 1 0 0 1 1 0 1 2 0 0 0 0 5 1 0 0 0 0 0 16 1 1648.838 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1122 1137 CEP170 Centrosomal protein of 170 kDa yes no 2;3 0.0058167 55.261 By MS/MS By MS/MS 2 2 22777000 12096000 10681000 1286 578 1374;1375 2960;2961;2962;2963 2455;2456;2457 2457 689;690;691 3 LGSQHSPGR DYMTSPARLGSQHSPG GSQHSPGRTASLNQRP R L G G R T 0 1 0 0 0 1 0 2 1 0 1 0 0 0 1 2 0 0 0 0 0 0 9 0 937.47298 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 220 228 ABI1 Abl interactor 1 yes no 2 0.0046858 76.522 By MS/MS By matching 1 1 6908600 3848200 3060300 1287 111 1376 2964;2965 2458 2458 139 1 LGSSGLGSASSIQAAVR KKAKQTGRLGSSGLGS SSIQAAVRQLEAEADA R L G V R Q 3 1 0 0 0 1 0 3 0 1 2 0 0 0 0 5 0 0 0 1 0 0 17 0 1559.8267 Q7Z6Z7;H0Y659 Q7Z6Z7 3750 3766 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 2 0.0093736 48.883 By MS/MS By matching 1 1 2547200 1214000 1333200 1288 1226 1377 2966;2967 2459 2459 1440 1 LGSVDSFER GANRMRGRLGSVDSFE GSVDSFERSNSLASEK R L G E R S 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 9 0 1008.4876 O60343;Q5JU47 O60343 586 594 TBC1D4 TBC1 domain family member 4 yes no 2 0.0046252 77.288 By matching By MS/MS 1 1 15103000 8175200 6928100 1289 789 1378 2968;2969 2460 2460 924 1 LGSYSGPTSVSR AEGTRRDRLGSYSGPT SGPTSVSRQRVESLRK R L G S R Q 0 1 0 0 0 0 0 2 0 0 1 0 0 0 1 4 1 0 1 1 0 0 12 0 1209.599 V9GYZ0;Q9BZ23 V9GYZ0 64 75 PANK2 Pantothenate kinase 2, mitochondrial yes no 2 8.1759E-09 109.15 By MS/MS By MS/MS 1 1 7052800 3428300 3624400 1290 1382 1379 2970;2971 2461;2462 2462 1648 2 LGTLNGSQEEMWQK EDSISNLKLGTLNGSQ SQEEMWQKTETVKQEN K L G Q K T 0 0 1 0 0 2 2 2 0 0 2 1 1 0 0 1 1 1 0 0 0 0 14 0 1619.7614 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6 H0YDJ4 1035 1048 NIN Ninein yes no 2 0.01717 46.797 By MS/MS By matching 1 1 1181000 764870 416130 1291 309 1380 2972;2973 2463 2463 53 1 LGVSVSPSR RSKSPKKKLGVSVSPS GVSVSPSRARRRRKTS K L G S R A 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 3 0 0 0 2 0 0 9 0 900.50288 H3BP01;E7ERS3;Q86VM9 H3BP01 194 202 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.0038772 81.625 By MS/MS By MS/MS 1 1 34957000 19255000 15702000 1292 413 1381 2974;2975 2464;2465 2465 473 2 LHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALR EEIAFLKKLHEEEIQE PDLTAALRDVRQQYES K L H L R D 3 1 0 3 0 6 5 0 2 3 4 1 0 0 1 1 1 0 0 3 0 0 34 1 3922.0072 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 237 270 VIM Vimentin yes no 4;5 2.1536E-05 54.824 By MS/MS By matching 2 2 26827000 14200000 12627000 1293 874 1382 2976;2977;2978;2979 2466;2467;2468 2468 3 LHPDGSPDVAGEK RLNVKAQKLHPDGSPD SPDVAGEKGIQKIPSG K L H E K G 1 0 0 2 0 0 1 2 1 0 1 1 0 0 2 1 0 0 0 1 0 0 13 0 1320.631 Q7Z2Z1 Q7Z2Z1 594 606 TICRR Treslin yes yes 2 0.017134 48.532 By matching By MS/MS 1 1 2010400 1277600 732800 1294 1217 1383 2980;2981 2469 2469 1 LHQLSGSDQLESTAHSR MEHLERTKLHQLSGSD LESTAHSRIRKERPIS K L H S R I 1 1 0 1 0 2 1 1 2 0 3 0 0 0 0 4 1 0 0 0 0 0 17 0 1864.9028 A0A087X2D8;O60271 A0A087X2D8 179 195 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 3 0.00091972 64.588 By MS/MS 1 1148100 1148100 0 1295 83 1384 2982 2470 2470 97 1 LIALLEVLSQK TDLSDGLRLIALLEVL LLEVLSQKKMHRKHNQ R L I Q K K 1 0 0 0 0 1 1 0 0 1 4 1 0 0 0 1 0 0 0 1 0 0 11 0 1225.7646 A0A087WWY3;Q5HY54;Q60FE5;P21333;F8WE98;O75369;Q14315 A0A087WWY3 50 60 FLNA;FLNB;FLNC Filamin-A;Filamin-B;Filamin-C no no 2 0.0016362 86.898 By MS/MS 1 999470 0 999470 1296 47;1100 1385 2983 2471 2471 1 LIAPVAEEEATVPNNK ________________ EATVPNNKITVVGVGQ K L I N K I 3 0 2 0 0 0 3 0 0 1 1 1 0 0 2 0 1 0 0 2 0 0 16 0 1693.8887 A8MW50;P07195;F5H793;C9J7H8 A8MW50 8 23 LDHB L-lactate dehydrogenase;L-lactate dehydrogenase B chain yes no 2 0.0090463 53.567 By matching By MS/MS 1 1 4633200 2993300 1639900 1297 243 1386 2984;2985 2472 2472 1 LIDLESPTPESQK TIEEDLKKLIDLESPT SPTPESQKSFKFHALS K L I Q K S 0 0 0 1 0 1 2 0 0 1 2 1 0 0 2 2 1 0 0 0 0 0 13 0 1455.7457 O43166;F5GYF8 O43166 1544 1556 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 1.6017E-09 108.66 By MS/MS By MS/MS 1 1 3685500 1833000 1852500 1298 777 1387 2986;2987 2473;2474 2474 902 2 LIEDNEYTAR IADFGLARLIEDNEYT EDNEYTAREGAKFPIK R L I A R E 1 1 1 1 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1222.583 Q573B4;J3QRU1;P06239;P12931;P06241;P07947 Q573B4 395 404 LCK;YES1;SRC;FYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lck;Proto-oncogene tyrosine-protein kinase Src;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Yes yes no 2 3.0319E-61 175.51 By MS/MS By MS/MS 1 1 52369000 33526000 18843000 1299 719 1388 2988;2989 2475;2476 2475 2369 2 LIEVDDER FPATGCQKLIEVDDER LIEVDDERKLRTFYEK K L I E R K 0 1 0 2 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 987.48729 P62753;A2A3R7 P62753 15 22 RPS6 40S ribosomal protein S6 yes no 2 0.017234 79.469 By MS/MS By matching 1 1 1541800 978740 563040 1300 1024 1389 2990;2991 2477 2477 1 LINDVTSIR RNLLLQTRLINDVTSI INDVTSIRPNIFLGVA R L I I R P 0 1 1 1 0 0 0 0 0 2 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1029.5819 A0A0U1RRH1;A0A0X1KG73;A0A087X080;Q15413 A0A0U1RRH1 635 643 RYR3 Ryanodine receptor 3 yes no 2 0.0010588 93.561 By MS/MS 1 348020 0 348020 1301 68 1390 2992 2478 2478 77 1 LIPGPLSPVAR SKEPLKEKLIPGPLSP GPLSPVARGGSNGGSN K L I A R G 1 1 0 0 0 0 0 1 0 1 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1118.6812 P48634 P48634 1213 1223 PRRC2A Protein PRRC2A yes yes 2 0.0091987 59.57 By MS/MS By MS/MS 1 1 35096000 18206000 16891000 1302 973 1391 2993;2994 2479;2480 2480 1113 2 LIRGPGENGDDS GGKRGHKRLIRGPGEN PGENGDDS________ R L I D S - 0 1 1 2 0 0 1 3 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1228.5684 Q6IBS0 Q6IBS0 338 349 TWF2 Twinfilin-2 yes yes 2 0.0081689 65.842 By MS/MS By MS/MS 1 1 927810 0 927810 1303 1186 1392 2995;2996 2481;2482 2482 1394 1 LISWYDNEFGYSNR ALNDHFVKLISWYDNE NEFGYSNRVVDLMAHM K L I N R V 0 1 2 1 0 0 1 1 0 1 1 0 0 1 0 2 0 1 2 0 0 0 14 0 1762.7951 P04406;E7EUT5 P04406 310 323 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.011915 54.471 By MS/MS By matching 1 1 3304800 2018400 1286400 1304 851 1393 2997;2998 2483 2483 1 LKATVTPSPVK EKKMPKPRLKATVTPS TVTPSPVKGKGKVGRP R L K V K G 1 0 0 0 0 0 0 0 0 0 1 2 0 0 2 1 2 0 0 2 0 0 11 1 1139.6914 Q9H1E3 Q9H1E3 174 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 8.8964E-40 162.67 By MS/MS By MS/MS 2 2 86642000 51808000 34834000 1305 1393 1394;1395 2999;3000;3001;3002 2484;2485;2486;2487 2485 1674;2217;2218 4 LKATVTPSPVKGK EKKMPKPRLKATVTPS TPSPVKGKGKVGRPTA R L K G K G 1 0 0 0 0 0 0 1 0 0 1 3 0 0 2 1 2 0 0 2 0 0 13 2 1324.8078 Q9H1E3 Q9H1E3 174 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 0.0036805 77.726 By matching By MS/MS 3 3 43856000 18165000 25691000 1306 1393 1396;1397 3003;3004;3005;3006;3007;3008 2488;2489;2490 2489 1674;2217;2218 3 LKDLFDYSPPLHK PEQVKSEKLKDLFDYS DYSPPLHKNLDAREKS K L K H K N 0 0 0 2 0 0 0 0 1 0 3 2 0 1 2 1 0 0 1 0 0 0 13 1 1571.8348 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 503 515 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 0.00014165 98.573 By MS/MS By MS/MS 2 3 15448000 7003200 8444900 1307 457 1398 3009;3010;3011;3012;3013 2491;2492;2493;2494;2495 2492 535 5 LKEDLNEKTTENNEQR ALKIEVNKLKEDLNEK TTENNEQREEIIRLKQ K L K Q R E 0 1 3 1 0 1 4 0 0 0 2 2 0 0 0 0 2 0 0 0 0 0 16 2 1959.9498 A0A024RBT8;Q6P9F0 A0A024RBT8 37 52 CCDC62 Coiled-coil domain-containing protein 62 yes no 3 0.0046077 47.204 By MS/MS 1 2544500 0 2544500 1308 3 1399 3014 2496 2496 1887;1888 1 LKFSDDEEEEEVVK EEVDYSEKLKFSDDEE EEEEEVVKDGRPKWNS K L K V K D 0 0 0 2 0 0 5 0 0 0 1 2 0 1 0 1 0 0 0 2 0 0 14 1 1694.7887 Q5JSZ5 Q5JSZ5 385 398 PRRC2B Protein PRRC2B yes yes 2 0.0046337 63.31 By MS/MS 1 3862800 3862800 0 1309 1158 1400 3015 2497 2497 1351 1 LKGQEDSLASAVDAATEQKTCDSD IAELIRERLKGQEDSL EQKTCDSD________ R L K S D - 4 0 0 4 1 2 2 1 0 0 2 2 0 0 0 3 2 0 0 1 0 0 24 2 2538.1392 J3KR35;Q8WUD4 J3KR35 156 179 CCDC12 Coiled-coil domain-containing protein 12 yes no 3 0.010434 47.757 By MS/MS By matching 1 1 10488000 5825500 4662200 1310 708 1401 3016;3017 2498 2498 834 1 LKLSPSPSSR LLEGEEERLKLSPSPS LSPSPSSRVTVSRASS R L K S R V 0 1 0 0 0 0 0 0 0 0 2 1 0 0 2 4 0 0 0 0 0 0 10 1 1070.6084 P20700;Q03252 P20700 388 397 LMNB1;LMNB2 Lamin-B1;Lamin-B2 no no 2 0.0089531 67.118 By MS/MS By MS/MS 2 1 28978000 18817000 10161000 1311 919;1049 1402;1403 3018;3019;3020 2499;2500;2501 2501 1040;1041 3 LKPGGVGAPSSSSPSPSPSAR RQLEEEQKLKPGGVGA PSPSPSARPGPPPSEE K L K A R P 2 1 0 0 0 0 0 3 0 0 1 1 0 0 5 7 0 0 0 1 0 0 21 1 1921.9858 Q92797 Q92797 1159 1179 SYMPK Symplekin yes yes 3 0.006861 47.806 By MS/MS By matching 1 1 3131800 1452500 1679300 1312 1313 1404 3021;3022 2502 2502 1548 1 LKSDERPVHIK FIQPRRKRLKSDERPV DERPVHIK________ R L K I K - 0 1 0 1 0 0 1 0 1 1 1 2 0 0 1 1 0 0 0 1 0 0 11 2 1320.7514 H0Y612;Q9UPN9 H0Y612 878 888 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 3 0.020156 55.98 By MS/MS By matching 2 1 13561000 10386000 3174600 1313 593 1405 3023;3024;3025 2503 2503 1 LKSEDELRPEVDEHTQK PPKPVRRRLKSEDELR EVDEHTQKTGVLAAVL R L K Q K T 0 1 0 2 0 1 4 0 1 0 2 2 0 0 1 1 1 0 0 1 0 0 17 2 2052.0124 E9PMG1;H0YDT0;Q96D71;H0YCR2 E9PMG1 648 664 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 3 0.0045446 58.626 By MS/MS By matching 1 1 9618800 7124400 2494500 1314 467 1406 3026;3027 2504 2504 551 1 LLAGASTKK EKKSGLLKLLAGASTK LAGASTKKKSRSPPSV K L L K K K 2 0 0 0 0 0 0 1 0 0 2 2 0 0 0 1 1 0 0 0 0 0 9 1 887.54402 Q8TEJ3 Q8TEJ3 726 734 SH3RF3 SH3 domain-containing RING finger protein 3 yes yes 1 0.019348 23.019 By MS/MS 1 292760 292760 0 1315 1284 1407 3028 2505 2505 1 LLAQAEGEPCYIR RVPVCHLRLLAQAEGE EGEPCYIRDSGVAPTD R L L I R D 2 1 0 0 1 1 2 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 13 0 1518.7501 H0YE41;E9PPF2;E9PM19;P29597 H0YE41 61 73 TYK2 Tyrosine-protein kinase;Non-receptor tyrosine-protein kinase TYK2 yes no 2 0.00076451 88.495 By MS/MS By matching 1 1 3153400 1850500 1303000 1316 464 1408 3029;3030 2506 2506 2335 1 LLASSPALPSSGAQAR GPPVGEPRLLASSPAL PSSGAQARLTRAPGPP R L L A R L 4 1 0 0 0 1 0 1 0 0 3 0 0 0 2 4 0 0 0 0 0 0 16 0 1524.826 Q9NYZ3 Q9NYZ3 164 179 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.014187 45.257 By MS/MS By matching 1 1 2468100 1275100 1193100 1317 1443 1409 3031;3032 2507 2507 1 LLDSSDSPFSASQYSTELK TSAHCNLRLLDSSDSP SQYSTELKKLYCQI__ R L L L K K 1 0 0 2 0 1 1 0 0 0 3 1 0 1 1 6 1 0 1 0 0 0 19 0 2073.9742 C9JW72 C9JW72 159 177 TP63 yes yes 2 0.016242 45.28 By MS/MS 1 0 0 0 1318 343 1410 3033 2508 2508 2315 1 LLEDSEESSEETVSR LEKNRSYRLLEDSEES SSEETVSRAGSSLQKK R L L S R A 0 1 0 1 0 0 5 0 0 0 2 0 0 0 0 4 1 0 0 1 0 0 15 0 1708.7639 A2AB15;A0A140T947;O60231 A2AB15 39 53 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 2 8.1263E-09 106.6 By MS/MS By MS/MS 2 2 16335000 8801400 7533200 1319 205 1411;1412 3034;3035;3036;3037 2509;2510;2511 2509 255;256 3 LLENPTINHQKNRPTR LVTGCCYRLLENPTIN HQKNRPTREAITHLLG R L L T R E 0 2 3 0 0 1 1 0 1 1 2 1 0 0 2 0 2 0 0 0 0 0 16 2 1930.0497 Q15021;E7EN77 Q15021 205 220 NCAPD2 Condensin complex subunit 1 yes no 2 0.0079771 42.425 By MS/MS 1 611810 0 611810 1320 1114 1413 3038 2512 2512 1 LLETIDQLYLEYAK EALERTEKLLETIDQL QLYLEYAKRAAPFNNW K L L A K R 1 0 0 1 0 1 2 0 0 1 4 1 0 0 0 0 1 0 2 0 0 0 14 0 1710.908 P12814;H9KV75;H0YJ11;H7C5W8 P12814 503 516 ACTN1 Alpha-actinin-1 yes no 2 0.00047351 92.611 By MS/MS 1 1293200 0 1293200 1321 895 1414 3039 2513 2513 1 LLETQSTGACQSSCK GPYSSMHKLLETQSTG GACQSSCKISSPCLKA K L L C K I 1 0 0 0 2 2 1 1 0 0 2 1 0 0 0 3 2 0 0 0 0 0 15 0 1668.7447 A0A0B4J1X2;O43497 A0A0B4J1X2 635 649 CACNA1G Voltage-dependent T-type calcium channel subunit alpha-1G yes no 3 0.012164 44.968 By matching By MS/MS 1 1 1813300 880100 933170 1322 137 1415 3040;3041 2514 2514 168;169 0 LLIDPNCSGHSPR KGSFSKGRLLIDPNCS NCSGHSPRTARHAPAV R L L P R T 0 1 1 1 1 0 0 1 1 1 2 0 0 0 2 2 0 0 0 0 0 0 13 0 1464.7143 Q8WYQ5;C9JSD5 Q8WYQ5 85 97 DGCR8 Microprocessor complex subunit DGCR8 yes no 2;3 0.00043424 88.075 By MS/MS By MS/MS 2 2 2279200 1372900 906320 1323 1298 1416 3042;3043;3044;3045 2515;2516;2517;2518 2515 1530;1531 4 LLIHQSLAGGIIGVK SDFDCELRLLIHQSLA AGGIIGVKGAKIKELR R L L V K G 1 0 0 0 0 1 0 3 1 3 3 1 0 0 0 1 0 0 0 1 0 0 15 0 1517.9293 P61978;Q5T6W2 P61978 149 163 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 0.00053916 64.244 By MS/MS 1 491980 491980 0 1324 1018 1417 3046 2519 2519 1 LLISELHLRVHAAYGSTK RHKANFLKLLISELHL HAAYGSTKDVAVYSAI K L L T K D 2 1 0 0 0 0 1 1 2 1 4 1 0 0 0 2 1 0 1 1 0 0 18 1 2007.1265 Q9BZ72 Q9BZ72 1195 1212 PITPNM2 Membrane-associated phosphatidylinositol transfer protein 2 yes yes 3 0.017009 44.294 By MS/MS 1 0 0 0 1325 1383 1418 3047 2520 2520 1 LLIYAVLPTGDVIGDSAK SDIAPVARLLIYAVLP DVIGDSAKYDVENCLA R L L A K Y 2 0 0 2 0 0 0 2 0 2 3 1 0 0 1 1 1 0 1 2 0 0 18 0 1844.0295 P01023 P01023 540 557 A2M Alpha-2-macroglobulin yes yes 2 1.286E-26 118.37 By MS/MS By MS/MS 1 1 12211000 7019500 5191800 1326 837 1419 3048;3049 2521;2522 2521 2 LLKEGEEPTVYSDEEEPKDESAR FKYHHVGKLLKEGEEP EPKDESARKND_____ K L L A R K 1 1 0 2 0 0 7 1 0 0 2 2 0 0 2 2 1 0 1 1 0 0 23 2 2649.2294 O00264 O00264 170 192 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3;4 5.2423E-12 86.439 By MS/MS By MS/MS 2 2 81427000 56001000 25426000 1327 752 1420 3050;3051;3052;3053 2523;2524;2525;2526 2523 870;2072 4 LLKEKEDSLMTCQQIYK ________________ MTCQQIYKALQEELTV M L L Y K A 0 0 0 1 1 2 2 0 0 1 3 3 1 0 0 1 1 0 1 0 0 0 17 2 2126.0752 Q6ZMV7 Q6ZMV7 2 18 LEKR1 Leucine-, glutamate- and lysine-rich protein 1 yes yes 3 0.017771 42.568 By MS/MS 1 0 0 0 1328 1208 1421 3054 2527 2527 217 1 LLLAEDSEEEVDFLSER QGETQPQRLLLAEDSE EVDFLSERRMVKKSRT R L L E R R 1 1 0 2 0 0 5 0 0 0 4 0 0 1 0 2 0 0 0 1 0 0 17 0 1992.9528 Q14676 Q14676 162 178 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 1.6417E-11 106.19 By MS/MS By MS/MS 1 1 9563600 5335300 4228400 1329 1104 1422 3055;3056 2528;2529 2528 1279 2 LLLATMESMNGGK ADLIERDRLLLATMES MESMNGGKLYSNAYLN R L L G K L 1 0 1 0 0 0 1 2 0 0 3 1 2 0 0 1 1 0 0 0 0 0 13 0 1363.684 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 101 113 ALDH1A1 Retinal dehydrogenase 1 yes no 2 0.0064904 42.469 By matching By MS/MS 1 1 850310 585960 264350 1330 829 1423 3057;3058 2530 2530 128;129 2094 1 LLLERPSPIR SDNDRSSRLLLERPSP LERPSPIRDRRGSLEK R L L I R D 0 2 0 0 0 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 10 1 1192.7292 A0A087WWP4;Q96T37 A0A087WWP4 650 659 RBM15 Putative RNA-binding protein 15 yes no 2 0.0051968 72.006 By matching By MS/MS 1 1 7387300 4183900 3203400 1331 45 1424 3059;3060 2531 2531 53 1 LLLMPAKHQPDLLLLR IQFTNRVKLLLMPAKH QPDLLLLRHVPLTRVH K L L L R H 1 1 0 1 0 1 0 0 1 0 7 1 1 0 2 0 0 0 0 0 0 0 16 1 1870.1226 Q96Q91 Q96Q91 863 878 SLC4A9 Anion exchange protein 4 yes yes 2 0.019096 43.308 By MS/MS 1 0 0 0 1332 1346 1425 3061 2532 2532 232 1 LLLNSGRVDVDCRDSVR RGNLALLKLLLNSGRV VDCRDSVRWFGRCMPS K L L V R W 0 3 1 3 1 0 0 1 0 0 3 0 0 0 0 2 0 0 0 3 0 0 17 2 1973.0113 V9GYT2 V9GYT2 30 46 ANKRD29 yes yes 3 0.010937 54.598 By MS/MS 1 0 0 0 1333 1541 1426 3062 2533 2533 1884;1885 1 LLNLQDSDSEECTSR RLQCFQPRLLNLQDSD DSEECTSRKPGQTVNN R L L S R K 0 1 1 2 1 1 2 0 0 0 3 0 0 0 0 3 1 0 0 0 0 0 15 0 1765.7789 Q52LR7 Q52LR7 532 546 EPC2 Enhancer of polycomb homolog 2 yes yes 2 0.0012827 62.861 By MS/MS By matching 1 1 2407900 1325800 1082100 1334 1148 1427 3063;3064 2534 2534 1336 1 LLNVEVPQKVGSEQK ICHSYLERLLNVEVPQ QKVGSEQKEPPEEAEP R L L Q K E 0 0 1 0 0 2 2 1 0 0 2 2 0 0 1 1 0 0 0 3 0 0 15 1 1666.9254 Q9NQS7 Q9NQS7 362 376 INCENP Inner centromere protein yes yes 2 0.015492 46.964 By matching By MS/MS 1 1 6412300 4113900 2298400 1335 1415 1428 3065;3066 2535 2535 1 LLQAQGVEVPSKDSLPK ARAEATLKLLQAQGVE PSKDSLPKKRPIYEDK K L L P K K 1 0 0 1 0 2 1 1 0 0 3 2 0 0 2 2 0 0 0 2 0 0 17 1 1808.0044 A0A087WUT6;O60841 A0A087WUT6 425 441 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0044051 58.172 By matching By MS/MS 1 1 970550 583120 387430 1336 28 1429 3067;3068 2536 2536 28 1 LLQDNQRQKK NISSRIQKLLQDNQRQ QDNQRQKKSSEILKSL K L L K K S 0 1 1 1 0 3 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 10 2 1269.7153 Q6UWE0 Q6UWE0 342 351 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 2 0.0014764 71.223 By matching By MS/MS 1 1 1180700 661890 518850 1337 1205 1430 3069;3070 2537 2537 37;38 1 LLQDSSSPVDLAK EKHKILHRLLQDSSSP SSPVDLAKLTAEATGK R L L A K L 1 0 0 2 0 1 0 0 0 0 3 1 0 0 1 3 0 0 0 1 0 0 13 0 1371.7246 E7EWM1;Q15596 E7EWM1 693 705 NCOA2 Nuclear receptor coactivator 2 yes no 2 0.00056352 91.307 By MS/MS By matching 1 1 2110300 1166000 944310 1338 430 1431 3071;3072 2538 2538 507 1 LLQDSVDFSLADAINTEFK RSSVPGVRLLQDSVDF DAINTEFKNTRTNEKV R L L F K N 2 0 1 3 0 1 1 0 0 1 3 1 0 2 0 2 1 0 0 1 0 0 19 0 2125.0579 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 79 97 VIM Vimentin yes no 3 1.3043E-48 124.2 By MS/MS 1 0 0 0 1339 874 1432 3073 2539 2539 1 LLQDSVDFSLADAINTEFKNTR RSSVPGVRLLQDSVDF NTEFKNTRTNEKVELQ R L L T R T 2 1 2 3 0 1 1 0 0 1 3 1 0 2 0 2 2 0 0 1 0 0 22 1 2496.2496 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 79 100 VIM Vimentin yes no 3 1.2877E-36 114.88 By MS/MS By MS/MS 1 1 10300000 7406300 2893400 1340 874 1433 3074;3075 2540;2541 2540 2 LLQNNYGLASFK QWRDSLDKLLQNNYGL NYGLASFKSFLKSEFS K L L F K S 1 0 2 0 0 1 0 1 0 0 3 1 0 1 0 1 0 0 1 0 0 0 12 0 1366.7245 E9PS96;B1APM2;O15539 E9PS96 31 42 RGS5 Regulator of G-protein signaling 5 yes no 3 0.012976 44.564 By matching By MS/MS 1 1 1170600 632850 537780 1341 256 1434 3076;3077 2542 2542 2295 1 LLRDHNLTREQFIALYR ITPEQFSRLLRDHNLT EQFIALYRLRPLVYTP R L L Y R L 1 3 1 1 0 1 1 0 1 1 4 0 0 1 0 0 1 0 1 0 0 0 17 2 2157.1807 F2Z3L3;J3KNR3;Q96P65 F2Z3L3 14 30 QRFPR Pyroglutamylated RFamide peptide receptor yes no 3 0.0065068 45.873 By MS/MS 1 1743100 1743100 0 1342 484 1435 3078 2543 2543 2339 1 LLSPACPAPK RVGCADSRLLSPACPA SPACPAPKEVTAAPAV R L L P K E 2 0 0 0 1 0 0 0 0 0 2 1 0 0 3 1 0 0 0 0 0 0 10 0 1052.5689 A0A0A0MSJ8;T1ECW5;O75170 A0A0A0MSJ8 471 480 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 2 0.00021889 93.442 By MS/MS By MS/MS 1 1 1020900 393630 627260 1343 118 1436 3079;3080 2544;2545 2545 143 2 LLSPQQPALQR TSSLTDPRLLSPQQPA PQQPALQRNSVSPGLP R L L Q R N 1 1 0 0 0 3 0 0 0 0 3 0 0 0 2 1 0 0 0 0 0 0 11 0 1249.7143 Q14814 Q14814 178 188 MEF2D Myocyte-specific enhancer factor 2D yes yes 2 0.0062396 65.842 By MS/MS By matching 1 1 968340 552390 415960 1344 1109 1437 3081;3082 2546 2546 1291 1 LLSSSLTADCSLR EEEDEQVRLLSSSLTA LTADCSLRSPSGREVE R L L L R S 1 1 0 1 1 0 0 0 0 0 4 0 0 0 0 4 1 0 0 0 0 0 13 0 1421.7184 Q147X3 Q147X3 186 198 NAA30 N-alpha-acetyltransferase 30 yes yes 2 0.0059396 58.781 By MS/MS By MS/MS 1 1 919460 358630 560840 1345 1108 1438 3083;3084 2547;2548 2547 1289;1290 2 LLSTDAEAVSTR DVEKEVKRLLSTDAEA DAEAVSTRWEIIAEDE R L L T R W 2 1 0 1 0 0 1 0 0 0 2 0 0 0 0 2 2 0 0 1 0 0 12 0 1261.6514 Q15545 Q15545 169 180 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 2 0.0074565 58.63 By matching By MS/MS 1 1 1898600 1123100 775500 1346 1126 1439 3085;3086 2549 2549 1311 1 LLVQNLNNERTLLTR KSQKASERLLVQNLNN NERTLLTRGLLKIDRL R L L T R G 0 2 3 0 0 1 1 0 0 0 5 0 0 0 0 0 2 0 0 1 0 0 15 1 1796.0268 A6PVS8 A6PVS8 516 530 LRRIQ3 Leucine-rich repeat and IQ domain-containing protein 3 yes yes 4 0.0075402 60.093 By MS/MS 1 155280 155280 0 1347 238 1440 3087 2550 2550 1942 0 LLVVYPWTQR VGGEALGRLLVVYPWT VVYPWTQRFFESFGDL R L L Q R F 0 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 1 1 1 2 0 0 10 0 1273.7183 F8W6P5;E9PEW8;E9PFT6;P68871;P02042;A8MUF7;E9PBW4;CON__P02070;CON__Q3SX09;P69892;P69891;P02100 F8W6P5 32 41 HBB;HBD;HBE1;HBG2;HBG1 Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta;Hemoglobin subunit gamma-2;Hemoglobin subunit gamma-1;Hemoglobin subunit epsilon yes no 2 0.0044058 73.665 By MS/MS By matching 1 1 2651400 1899400 752030 + 1348 439 1441 3088;3089 2551 2551 1 LMFKTEGPDSD QSTSRHKKLMFKTEGP KTEGPDSD________ K L M S D - 0 0 0 2 0 0 1 1 0 0 1 1 1 1 1 1 1 0 0 0 0 0 11 1 1238.5489 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 224 234 TP53 Cellular tumor antigen p53 yes no 2 1.6934E-05 106.67 By MS/MS By MS/MS 3 3 56338000 28893000 27444000 1349 65 1442;1443 3090;3091;3092;3093;3094;3095 2552;2553;2554;2555;2556 2552 8 74 5 LMLLLEVISGER EDFRDGLKLMLLLEVI LEVISGERLAKPERGK K L M E R L 0 1 0 0 0 0 2 1 0 1 4 0 1 0 0 1 0 0 0 1 0 0 12 0 1371.7796 P12814;P35609;O43707;G3V5M4;G3V2N5;A0A087WSZ2;Q08043 P12814 65 76 ACTN1;ACTN2;ACTN4;ACTN3 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4;Alpha-actinin-3 yes no 2 2.1558E-114 185.61 By MS/MS By matching 1 1 17354000 9680700 7673800 1350 895 1444 3096;3097 2557 2557 155 1 LMLPDSPLVEEGR LSKEDFLKLMLPDSPL SPLVEEGRRKFSFYGN K L M G R R 0 1 0 1 0 0 2 1 0 0 3 0 1 0 2 1 0 0 0 1 0 0 13 0 1454.7439 Q9P2F8 Q9P2F8 1456 1468 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 2 0.0062599 58.32 By MS/MS 1 247750 0 247750 1351 1449 1445 3098 2558 2558 250 1755 1 LMLSTSEYSQSPK SLTGDSCKLMLSTSEY SEYSQSPKMESLSSHR K L M P K M 0 0 0 0 0 1 1 0 0 0 2 1 1 0 1 4 1 0 1 0 0 0 13 0 1469.7072 Q12888;A6NNK5;C9JXV0 Q12888 515 527 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.011814 70.889 By MS/MS By matching 1 1 1840100 746510 1093600 1352 1069 1446 3099;3100 2559 2559 1 LMTGDTYTAHAGAK VADFGLSRLMTGDTYT YTAHAGAKFPIKWTAP R L M A K F 3 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 3 0 1 0 0 0 14 0 1435.6766 P42684;P00519 P42684 433 446 ABL2;ABL1 Abelson tyrosine-protein kinase 2;Tyrosine-protein kinase ABL1 yes no 2 1.361E-07 103.08 By MS/MS By MS/MS 1 1 3136900 2192400 944510 1353 961 1447 3101;3102 2560;2561 2560 168 2122 2 LMTPKPVSIATNR SQYPPVQRLMTPKPVS PVSIATNRSVYFKPSL R L M N R S 1 1 1 0 0 0 0 0 0 1 1 1 1 0 2 1 2 0 0 1 0 0 13 1 1426.7966 P49790 P49790 367 379 NUP153 Nuclear pore complex protein Nup153 yes yes 3 0.0025587 56.139 By MS/MS 1 284720 284720 0 1354 980 1448 3103 2562 2562 172 2132 1 LNATASLEQER PQPQARSRLNATASLE TASLEQERSERPRAPG R L N E R S 2 1 1 0 0 1 2 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1230.6204 O76024 O76024 27 37 WFS1 Wolframin yes yes 2 0.0018881 79.089 By matching By MS/MS 1 1 2675600 1475200 1200500 1355 805 1449 3104;3105 2563 2563 948 1 LNFDMTASPK IDKQEKVKLNFDMTAS FDMTASPKILMSKPVL K L N P K I 1 0 1 1 0 0 0 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 10 0 1122.5379 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 326 335 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.00089732 87.216 By matching By MS/MS 1 1 1926400 805600 1120800 1356 38 1450 3106;3107 2564 2564 45 1 LNHSPPQSSSR REKKFSRRLNHSPPQS SPPQSSSRYRENRSRD R L N S R Y 0 1 1 0 0 1 0 0 1 0 1 0 0 0 2 4 0 0 0 0 0 0 11 0 1208.5898 A0A087X0H9;Q5T8P6 A0A087X0H9 124 134 RBM26 RNA-binding protein 26 yes no 2 0.00027536 100.02 By MS/MS By MS/MS 1 1 5830100 3378600 2451500 1357 70 1451 3108;3109 2565;2566;2567;2568 2567 79 4 LNHVAAGLVSPSLK LMSTVDPKLNHVAAGL GLVSPSLKSDTSSKEI K L N L K S 2 0 1 0 0 0 0 1 1 0 3 1 0 0 1 2 0 0 0 2 0 0 14 0 1404.8089 Q5T757;Q05519;Q5T760 Q5T757 138 151 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2;3 0.00087445 73.76 By MS/MS By MS/MS 2 2 37395000 21098000 16297000 1358 1051 1452 3110;3111;3112;3113 2569;2570;2571 2571 1204 3 LNLGTDSDSSPQK TGDISVEKLNLGTDSD DSDSSPQKSSRDPPSS K L N Q K S 0 0 1 2 0 1 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 13 0 1360.647 K7EN76;Q16512 K7EN76 39 51 PKN1 Serine/threonine-protein kinase N1 yes no 2 0.00051696 89.44 By MS/MS By matching 1 1 3199600 1450100 1749600 1359 734 1453 3114;3115 2572 2572 853;854 1 LNNQEEETEFKELDGLR RLEKQNEKLNNQEEET FKELDGLREALANLRG K L N L R E 0 1 2 1 0 1 5 1 0 0 3 1 0 1 0 0 1 0 0 0 0 0 17 1 2062.9807 Q8N998 Q8N998 30 46 CCDC89 Coiled-coil domain-containing protein 89 yes yes 3 0.0060738 43.798 By matching By MS/MS 1 1 4891100 408420 4482700 1360 1262 1454 3116;3117 2573 2573 1 LNQKSDGKPR ________________ QKSDGKPRKVRFKISS K L N P R K 0 1 1 1 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 10 2 1141.6204 A6NFK2 A6NFK2 8 17 GRXCR2 Glutaredoxin domain-containing cysteine-rich protein 2 yes yes 2 0.011814 57.047 By MS/MS By MS/MS 1 1 57953000 31835000 26118000 1361 231 1455 3118;3119 2574;2575 2574 285 2 LNQPGTPTR GWLCKTLRLNQPGTPT NQPGTPTRTAV_____ R L N T R T 0 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 2 0 0 0 0 0 9 0 982.51959 M0R1B6;G5E9C7;P36507 M0R1B6 93 101 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 2 0.012423 86.014 By matching By MS/MS 1 1 30764000 16488000 14277000 1362 573 1456 3120;3121 2576 2576 2031 1 LNQPGTPTRTAV GWLCKTLRLNQPGTPT GTPTRTAV________ R L N A V - 1 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 3 0 0 1 0 0 12 1 1253.6728 M0R1B6;G5E9C7;P36507 M0R1B6 93 104 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 2 0.0032434 89.26 By MS/MS By MS/MS 1 1 11654000 4076400 7577400 1363 573 1457 3122;3123 2577;2578 2578 2031 2 LNTSDFQK FGDLPRPRLNTSDFQK LNTSDFQKLKRKY___ R L N Q K L 0 0 1 1 0 1 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 8 0 951.46616 Q96B36 Q96B36 244 251 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.006154 106.88 By MS/MS By matching 1 1 18244000 10249000 7995100 1364 1322 1458 3124;3125 2579 2579 2202 1 LNTSDFQKLK FGDLPRPRLNTSDFQK TSDFQKLKRKY_____ R L N L K R 0 0 1 1 0 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 10 1 1192.6452 Q96B36 Q96B36 244 253 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.017674 69.815 By MS/MS By MS/MS 1 1 2977200 1030600 1946600 1365 1322 1459 3126;3127 2580;2581 2580 2202 2 LNTSDFQKLKR FGDLPRPRLNTSDFQK SDFQKLKRKY______ R L N K R K 0 1 1 1 0 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 11 2 1348.7463 Q96B36 Q96B36 244 254 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 3 0.00021397 91.636 By matching By MS/MS 1 1 1376700 406830 969830 1366 1322 1460 3128;3129 2582 2582 2202 1 LNTVASPK SKKIKLDRLNTVASPK LNTVASPKDCQELASI R L N P K D 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 8 0 828.47052 Q96T58 Q96T58 1057 1064 SPEN Msx2-interacting protein yes yes 2 0.0088546 110.53 By MS/MS By MS/MS 2 1 0 0 0 1367 1353 1461 3130;3131;3132 2583;2584;2585 2583 1609 3 LNVLEKSSPGHR AISKLEARLNVLEKSS EKSSPGHRATAPQTQH R L N H R A 0 1 1 0 0 0 1 1 1 0 2 1 0 0 1 2 0 0 0 1 0 0 12 1 1335.7259 E9PL71;E9PQ49;E9PI39;E9PQZ1;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PK06;E9PPR1;E9PL12;E9PN91;E9PMW7;H0YCK7 E9PL71 88 99 EEF1D Elongation factor 1-delta yes no 2;3 8.4888E-06 104.7 By MS/MS By MS/MS 2 2 7062600 3981800 3080800 1368 78 1462 3133;3134;3135;3136 2586;2587;2588 2587 93;94 3 LPATAAEPEAAVISNGEH SPAKKVPRLPATAAEP AVISNGEH________ R L P E H - 5 0 1 0 0 0 3 1 1 1 1 0 0 0 2 1 1 0 0 1 0 0 18 0 1775.869 Q01581 Q01581 503 520 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 2 1.6244E-06 88.319 By MS/MS By matching 1 1 1878500 1031200 847260 1369 1040 1463 3137;3138 2589 2589 16 1184 1 LPDLSPVENK AGPIKAQKLPDLSPVE DLSPVENKEHKPGPIG K L P N K E 0 0 1 1 0 0 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1110.5921 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2103 2112 PRRC2C Protein PRRC2C yes no 2 0.013226 56.434 By MS/MS By matching 1 1 4548000 2307200 2240800 1370 406 1464 3139;3140 2590 2590 458 1 LPDSDDDEDEETAIQR QVTLQDYRLPDSDDDE DEETAIQRVLQQLTEE R L P Q R V 1 1 0 5 0 1 3 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 16 0 1846.7705 H3BRM1;H3BRF9;Q96K21 H3BRM1 259 274 ZFYVE19 Abscission/NoCut checkpoint regulator yes no 2 0.00095231 79.804 By matching By MS/MS 1 1 6150900 3315200 2835700 1371 658 1465 3141;3142 2591 2591 773 1 LPGLVFLYMEK IDQRVLEKLPGLVFLY LVFLYMEKNQLEEVPS K L P E K N 0 0 0 0 0 0 1 1 0 0 3 1 1 1 1 0 0 0 1 1 0 0 11 0 1308.7152 P51888 P51888 149 159 PRELP Prolargin yes yes 2 1.0739E-05 117.31 By MS/MS By MS/MS 1 2 26257000 17746000 8511700 1372 997 1466;1467 3143;3144;3145 2592;2593;2594 2594 177 3 LPGSGAVQAASPER APGARLLRLPGSGAVQ VQAASPERAGWTEALR R L P E R A 3 1 0 0 0 1 1 2 0 0 1 0 0 0 2 2 0 0 0 1 0 0 14 0 1338.6892 Q86U90 Q86U90 50 63 YRDC YrdC domain-containing protein, mitochondrial yes yes 2 0.00024033 88.311 By MS/MS By MS/MS 1 1 2186300 1232300 954030 1373 1229 1468 3146;3147 2595;2596 2596 1445 2 LPIFSRLSISDD PTLDNSRRLPIFSRLS SRLSISDD________ R L P D D - 0 1 0 2 0 0 0 0 0 2 2 0 0 1 1 3 0 0 0 0 0 0 12 1 1361.7191 Q07352;P47974 Q07352 327 338 ZFP36L1;ZFP36L2 Zinc finger protein 36, C3H1 type-like 1;Zinc finger protein 36, C3H1 type-like 2 yes no 2 0.0085334 66.989 By MS/MS By MS/MS 1 1 1948100 1203200 744870 1374 972 1469 3148;3149 2597;2598 2598 1106;1107 2 LPLLPPESPGPLR ERRGGGLRLPLLPPES PESPGPLRQRHVACLA R L P L R Q 0 1 0 0 0 0 1 1 0 0 4 0 0 0 5 1 0 0 0 0 0 0 13 0 1384.8078 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 765 777 SCRIB Protein scribble homolog yes no 2 0.00028525 96.23 By MS/MS By MS/MS 1 1 2902100 1729400 1172700 1375 178 1470 3150;3151 2599;2600;2601;2602;2603 2599 221 5 LPLVPESPRR GLEGRPERLPLVPESP LVPESPRRMMTRSQDA R L P R R M 0 2 0 0 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 10 1 1162.6822 C9J0I9;Q86WB0 C9J0I9 272 281 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 2.5383E-05 106.16 By MS/MS By MS/MS 1 1 6606600 3240500 3366100 1376 312 1471 3152;3153 2604;2605;2606 2605 372 3 LPSGLPVSLLTLYLDNNK LSFNQIARLPSGLPVS TLYLDNNKISNIPDEY R L P N K I 0 0 2 1 0 0 0 1 0 0 6 1 0 0 2 2 1 0 1 1 0 0 18 0 1956.0932 P51884;CON__Q05443 P51884 199 216 LUM Lumican yes no 2 2.4304E-28 126.09 By MS/MS By MS/MS 1 1 32398000 22703000 9695300 1377 996 1472 3154;3155 2607;2608 2608 2 LPSLGNKEPPGQEK LQGNVNGRLPSLGNKE KEPPGQEKVQLKRKVT R L P E K V 0 0 1 0 0 1 2 2 0 0 2 2 0 0 3 1 0 0 0 0 0 0 14 1 1492.7886 Q9UPY5 Q9UPY5 24 37 SLC7A11 Cystine/glutamate transporter yes yes 3 0.0030489 59.606 By MS/MS By matching 1 1 1109300 842600 266720 1378 1485 1473 3156;3157 2609 2609 1798 1 LPSSPVYEDAASFK APQPTEERLPSSPVYE YEDAASFKAELSYRGP R L P F K A 2 0 0 1 0 0 1 0 0 0 1 1 0 1 2 3 0 0 1 1 0 0 14 0 1509.7351 Q14247;H0YEV2;H0YCD9 Q14247 415 428 CTTN Src substrate cortactin yes no 2 4.7844E-07 103.13 By MS/MS By MS/MS 2 3 16454000 7251700 9202600 1379 1098 1474;1475 3158;3159;3160;3161;3162 2610;2611;2612 2611 1272;2452 3 LQAKESPQR CLAWAPARLQAKESPQ QAKESPQRKKRKSEAV R L Q Q R K 1 1 0 0 0 2 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1055.5724 Q15061 Q15061 72 80 WDR43 WD repeat-containing protein 43 yes yes 2 0.0059015 83.182 By matching By MS/MS 1 1 10577000 5394400 5182200 1380 1118 1476 3163;3164 2613 2613 1305 1 LQDEANYHLYGSR NEPSLQSKLQDEANYH NYHLYGSRMDRQTKQQ K L Q S R M 1 1 1 1 0 1 1 1 1 0 2 0 0 0 0 1 0 0 2 0 0 0 13 0 1564.727 Q13546 Q13546 378 390 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 3 0.0057011 53.034 By MS/MS By matching 1 1 1382400 904140 478250 1381 1087 1477 3165;3166 2614 2614 1254 1 LQDVSGQLSSSKK KKKELEKRLQDVSGQL GQLSSSKKPARKEKPG R L Q K K P 0 0 0 1 0 2 0 1 0 0 2 2 0 0 0 4 0 0 0 1 0 0 13 1 1375.7307 Q15059 Q15059 672 684 BRD3 Bromodomain-containing protein 3 yes yes 2 0.016434 46.352 By MS/MS 1 0 0 0 1382 1117 1478 3167 2615 2615 1 LQEKTGTYTTNKTK ENFLNISRLQEKTGTY TYTTNKTKNNHVSDLG R L Q T K N 0 0 1 0 0 1 1 1 0 0 1 3 0 0 0 0 5 0 1 0 0 0 14 2 1611.8468 A0A087WXL3;O75417 A0A087WXL3 1426 1439 POLQ DNA polymerase theta yes no 2 0.009307 44.44 By MS/MS By matching 2 2 2696200 1797300 898880 1383 52 1479 3168;3169;3170;3171 2616;2617 2616 1902;1903 1 LQHLENELTHDIITK FFLPDEGKLQHLENEL LTHDIITKFLENEDRR K L Q T K F 0 0 1 1 0 1 2 0 2 2 3 1 0 0 0 0 2 0 0 0 0 0 15 0 1802.9527 P01009;A0A0G2JRN3;A0A024R6I7 P01009 284 298 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 4 0.00063259 56.793 By MS/MS 1 650450 650450 0 1384 836 1480 3172 2618 2618 1 LQHSTSILR QQRTRRPKLQHSTSIL QHSTSILRKQAEEEAI K L Q L R K 0 1 0 0 0 1 0 0 1 1 2 0 0 0 0 2 1 0 0 0 0 0 9 0 1053.5931 A0A087WWK8;Q6DN90 A0A087WWK8 70 78 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2 0.001155 92.538 By matching By MS/MS 1 1 2740300 1361100 1379200 1385 44 1481 3173;3174 2619 2619 52 1 LQLDNQYAVLENQK VSKNQALKLQLDNQYA YAVLENQKSSHSQYN_ K L Q Q K S 1 0 2 1 0 3 1 0 0 0 3 1 0 0 0 0 0 0 1 1 0 0 14 0 1674.8577 Q9UKY7;D6R9V8 Q9UKY7 238 251 CDV3 Protein CDV3 homolog yes no 3 1.7739E-05 99.481 By MS/MS By MS/MS 1 1 1481000 750060 730900 1386 1469 1482 3175;3176 2620;2621 2620 2510 2 LQLEATERQR EEEIRVVRLQLEATER LEATERQRGGAEGELQ R L Q Q R G 1 2 0 0 0 2 2 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 10 1 1242.668 Q15149 Q15149 1596 1605 PLEC Plectin yes yes 2 0.009815 69.198 By MS/MS 1 0 0 0 1387 1120 1483 3177 2622 2622 1 LQLQEQLQAETELCAEAEELR QSQLMAEKLQLQEQLQ CAEAEELRARLTAKKQ K L Q L R A 3 1 0 0 1 4 6 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 21 0 2500.2115 P35579 P35579 883 903 MYH9 Myosin-9 yes yes 2;3 5.2263E-68 176.29 By MS/MS By MS/MS 2 2 29147000 23457000 5690500 1388 950 1484 3178;3179;3180;3181 2623;2624;2625;2626 2625 4 LQLQGLDLSSR SLELEVARLQLQGLDL QGLDLSSRSLLGIDTE R L Q S R S 0 1 0 1 0 2 0 1 0 0 4 0 0 0 0 2 0 0 0 0 0 0 11 0 1228.6776 P49454 P49454 1739 1749 CENPF Centromere protein F yes yes 2 0.0085 61.435 By MS/MS By matching 1 1 335530 191940 143590 1389 976 1485 3182;3183 2627 2627 1115;1116 1 LQPERGSPK AEKHVTQRLQPERGSP QPERGSPKKCEAEEAE R L Q P K K 0 1 0 0 0 1 1 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1010.5509 S4R3H4;E7EQT4;Q9UKV3;A0A087WYN3 S4R3H4 665 673 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0076637 78.513 By MS/MS 1 7718500 0 7718500 1390 412 1486 3184 2628 2628 468 1 LQPQTTYDITVLPIYK VTSTVLKRLQPQTTYD ITVLPIYKMGEGKLRQ R L Q Y K M 0 0 0 1 0 2 0 0 0 2 2 1 0 0 2 0 3 0 2 1 0 0 16 0 1892.0295 D6RGG3;Q99715 D6RGG3 1055 1070 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0026463 72.705 By MS/MS By matching 1 1 867210 640960 226260 1391 379 1487 3185;3186 2629 2629 1 LQQAQKGTPMKPNTQATPP QRKIKKYRLQQAQKGT PNTQATPP________ R L Q P P - 2 0 1 0 0 4 0 1 0 0 1 2 1 0 4 0 3 0 0 0 0 0 19 2 2035.0521 E7ESS4;P05362 E7ESS4 292 310 ICAM1 Intercellular adhesion molecule 1 yes no 3 0.016027 45.395 By MS/MS 1 0 0 0 1392 418 1488 3187 2630 2630 70 1 LQQGAGLESPQGQPEPGAASPQR KTSPGSPRLQQGAGLE PGAASPQRQQDLHLES R L Q Q R Q 3 1 0 0 0 5 2 4 0 0 2 0 0 0 4 2 0 0 0 0 0 0 23 0 2302.1302 Q9H6F5 Q9H6F5 72 94 CCDC86 Coiled-coil domain-containing protein 86 yes yes 3 0.00059474 61.488 By matching By MS/MS 1 1 20532000 12598000 7933500 1393 1400 1489 3188;3189 2631 2631 1690 1 LQQQHSEQPPLQPSPVMTR MKTRRTTRLQQQHSEQ QPSPVMTRRGLRDSHS R L Q T R R 0 1 0 0 0 5 1 0 1 0 2 0 1 0 4 2 1 0 0 1 0 0 19 0 2200.1059 H0YDU3;A0A0A0MSK5;J3KN66;Q5JTV8 H0YDU3 33 51 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.00027951 77.969 By MS/MS By matching 2 2 42047000 22976000 19071000 1394 119 1490;1491 3190;3191;3192;3193 2632;2633 2633 18 147;1922 2 LQSAGSAMPTSSSFK SPALKTTRLQSAGSAM MPTSSSFKHRIKEQED R L Q F K H 2 0 0 0 0 1 0 1 0 0 1 1 1 1 1 5 1 0 0 0 0 0 15 0 1497.7133 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1232 1246 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0079643 51.147 By matching By MS/MS 1 1 2114700 1097900 1016800 1395 578 1492 3194;3195 2634 2634 692 1 LQSEPQVLLIRAQTLYKK ________________ RAQTLYKKFVKSTGFL K L Q K K F 1 1 0 0 0 3 1 0 0 1 4 2 0 0 1 1 1 0 1 1 0 0 18 2 2127.2416 G3V1Z3 G3V1Z3 5 22 TMEM116 yes yes 3 0.00067838 69.081 By MS/MS 1 207640000 207640000 0 1396 552 1493 3196 2635;2636;2637 2636 25;26 650;2021;2350 3 LQSFDSPER RGNDRREKLQSFDSPE QSFDSPERKRIKYSRE K L Q E R K 0 1 0 1 0 1 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 9 0 1077.5091 E9PGM9;P78332 E9PGM9 888 896 RBM6 RNA-binding protein 6 yes no 2 0.017186 62.107 By MS/MS By matching 1 1 2487800 1412600 1075200 1397 447 1494 3197;3198 2638 2638 523 1 LQSIGTENTEENR STGSIAKRLQSIGTEN TENTEENRRFYRQLLL R L Q N R R 0 1 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 13 0 1489.7009 H3BUH7;H3BQN4;J3KPS3;P04075;H3BMQ8;H3BR04;H3BPS8 H3BUH7 44 56 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0010951 83.499 By MS/MS By matching 1 1 2545600 1618700 926920 1398 654 1495 3199;3200 2639 2639 1 LQTLVMGKVSRTCK TLLQQLQKLQTLVMGK GKVSRTCKLAGTQTGT K L Q C K L 0 1 0 0 1 1 0 1 0 0 2 2 1 0 0 1 2 0 0 2 0 0 14 2 1619.8851 Q70SY1 Q70SY1 357 370 CREB3L2 Cyclic AMP-responsive element-binding protein 3-like protein 2;Processed cyclic AMP-responsive element-binding protein 3-like protein 2 yes yes 2 0.015702 45.829 By MS/MS 1 0 0 0 1399 1211 1496 3201 2640 2640 218 1 LQTPNTFPK TPQAKKIKLQTPNTFP QTPNTFPKRKKGEKRA K L Q P K R 0 0 1 0 0 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 0 0 9 0 1044.5604 A0A0A0MRM9;Q14978 A0A0A0MRM9 614 622 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0019236 78.324 By MS/MS By MS/MS 1 1 2557400 1561700 995730 1400 106 1497 3202;3203 2641;2642 2641 1914;1915 2 LQVYEGGGQPPPQDLPGSPK EVAALRKKLQVYEGGG QDLPGSPKSGPPPEHL K L Q P K S 0 0 0 1 0 3 1 4 0 0 2 1 0 0 5 1 0 0 1 1 0 0 20 0 2063.0324 A0A0C4DGP2;A0A0C4DGP5;Q86Y91 A0A0C4DGP2 387 406 KIF18B Kinesin-like protein;Kinesin-like protein KIF18B yes no 3 0.008612 44.054 By MS/MS 1 328030 328030 0 1401 162 1498 3204 2643 2643 206 1 LRSPSNDSAHR NRSHTSGRLRSPSNDS PSNDSAHRSGDDQSGR R L R H R S 1 2 1 1 0 0 0 0 1 0 1 0 0 0 1 3 0 0 0 0 0 0 11 1 1238.6116 Q5T200 Q5T200 1206 1216 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 1.7891E-29 157.09 By MS/MS By matching 1 1 2536700 2480000 56791 1402 1167 1499 3205;3206 2644 2644 1367 1 LRSSVPGVR ATRSSAVRLRSSVPGV RSSVPGVRLLQDSVDF R L R V R L 0 2 0 0 0 0 0 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 9 1 969.57196 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 70 78 VIM Vimentin yes no 2 0.0064512 64.374 By MS/MS By MS/MS 1 1 0 0 0 1403 874 1500 3207;3208 2645;2646 2645 1005;1006 2 LSASTASELSPK LPASPRARLSASTASE TASELSPKSKARPSSP R L S P K S 2 0 0 0 0 0 1 0 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1189.619 H0YF21;Q3KQU3 H0YF21 34 45 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.00048834 98.582 By MS/MS By MS/MS 1 1 5567500 2927700 2639900 1404 616 1501 3209;3210 2647;2648 2648 736;737 2 LSDAGITPLFLTR QLREAVLKLSDAGITP ITPLFLTRQEDRQLIN K L S T R Q 1 1 0 1 0 0 0 1 0 1 3 0 0 1 1 1 2 0 0 0 0 0 13 0 1402.782 E7ENL6;P12111 E7ENL6 1925 1937 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0067603 65.5 By MS/MS 1 618590 618590 0 1405 403 1502 3211 2649 2649 1 LSDDFDSPVKGPLCK PLKKREIKLSDDFDSP PVKGPLCKSVTPTKEF K L S C K S 0 0 0 3 1 0 0 1 0 0 2 2 0 1 2 2 0 0 0 1 0 0 15 1 1676.808 Q96T23;H0YER1;H0YCN2 Q96T23 391 405 RSF1 Remodeling and spacing factor 1 yes no 3 0.016073 43.813 By MS/MS By matching 1 1 1687100 871030 816110 1406 1352 1503 3212;3213 2650 2650 1 LSDGVFKPDTFHGLK LLDLQHNRLSDGVFKP PDTFHGLKNLMQLNLA R L S L K N 0 0 0 2 0 0 0 2 1 0 2 2 0 2 1 1 1 0 0 1 0 0 15 1 1659.8621 P51888 P51888 207 221 PRELP Prolargin yes yes 3 0.0021122 53.001 By MS/MS 1 1213600 1213600 0 1407 997 1504 3214 2651 2651 1 LSDNGLKAGLGR RAAPLKVKLSDNGLKA GLKAGLGRSKSKGSLD K L S G R S 1 1 1 1 0 0 0 3 0 0 3 1 0 0 0 1 0 0 0 0 0 0 12 1 1199.6622 Q9ULC8 Q9ULC8 285 296 ZDHHC8 Probable palmitoyltransferase ZDHHC8 yes yes 2 0.019956 42.395 By MS/MS 1 0 0 0 1408 1471 1505 3215 2652 2652 1 LSEEAECPNPSTPSK REQEMFFKLSEEAECP PNPSTPSKAAKFFPYS K L S S K A 1 0 1 0 1 0 3 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 15 0 1644.7301 O94804 O94804 941 955 STK10 Serine/threonine-protein kinase 10 yes yes 2 0.0066865 58.172 By matching By MS/MS 1 1 6866800 4079900 2786900 1409 808 1506 3216;3217 2653 2653 2091 0 LSITGTYDLK SASLHLPKLSITGTYD ITGTYDLKSVLGQLGI K L S L K S 0 0 0 1 0 0 0 1 0 1 2 1 0 0 0 1 2 0 1 0 0 0 10 0 1109.5968 P01009;A0A0G2JRN3;A0A024R6I7 P01009 315 324 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 2.0867E-05 104.01 By MS/MS 1 1724300 1724300 0 1410 836 1507 3218 2654 2654 1 LSLEGDHSTPPSAYGSVK TVHEILCKLSLEGDHS PSAYGSVKAYTNFDAE K L S V K A 1 0 0 1 0 0 1 2 1 0 2 1 0 0 2 4 1 0 1 1 0 0 18 0 1843.8952 H0YMD0;H0YMU9;H0YN42;P07355;H0YMM1;H0YKS4;H0YMD9;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;A6NMY6;H0YNB8;H0YKN4 H0YMD0 11 28 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 3 0.0014709 58.98 By MS/MS By matching 1 1 2762900 1457900 1304900 1411 628 1508 3219;3220 2655 2655 750 1 LSLEIEQLELQR KMALEVYKLSLEIEQL IEQLELQRDSARQSTL K L S Q R D 0 1 0 0 0 2 3 0 0 1 4 0 0 0 0 1 0 0 0 0 0 0 12 0 1469.809 P04003 P04003 574 585 C4BPA C4b-binding protein alpha chain yes yes 2 0.0037095 73.887 By MS/MS By matching 1 1 524440 323490 200960 1412 847 1509 3221;3222 2656 2656 1 LSPSASPPRR SPPRKTRRLSPSASPP PSASPPRRRHRPSPPA R L S R R R 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 0 0 0 10 1 1066.5883 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 383 392 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.011734 55.37 By MS/MS 1 6844100 0 6844100 1413 247 1510 3223 2657 2657 308;309 1 LSQELSTVATEK FLKEEKSKLSQELSTV LSTVATEKNKMAGELE K L S E K N 1 0 0 0 0 1 2 0 0 0 2 1 0 0 0 2 2 0 0 1 0 0 12 0 1304.6824 Q5M9N0 Q5M9N0 774 785 CCDC158 Coiled-coil domain-containing protein 158 yes yes 3 0.010079 53.981 By MS/MS 1 0 0 0 1414 1161 1511 3224 2658 2658 1354;1355;2174 1 LSSEDEEEDEAEDDQSEASGKK HPSNMMSKLSSEDEEE QSEASGKKSVKG____ K L S K K S 2 0 0 4 0 1 7 1 0 0 1 2 0 0 0 4 0 0 0 0 0 0 22 1 2425.9729 G3V4G1;Q8NEJ9 G3V4G1 116 137 NGDN Neuroguidin yes no 3 0.00019145 78.401 By MS/MS By MS/MS 1 1 10347000 6756600 3590500 1415 559 1512 3225;3226 2659;2660 2659 658 2 LSSPVLHR RLSNGLARLSSPVLHR LSSPVLHRLRLREDEN R L S H R L 0 1 0 0 0 0 0 0 1 0 2 0 0 0 1 2 0 0 0 1 0 0 8 0 907.52395 Q16643;D6RCR4;D6R9W4 Q16643 140 147 DBN1 Drebrin yes no 2 0.010228 78.098 By MS/MS By matching 1 1 111530000 67732000 43801000 1416 1137 1513 3227;3228 2661 2661 1327 1 LSSQISAGEEK GWNEKSVKLSSQISAG QISAGEEKWNSVSPAS K L S E K W 1 0 0 0 0 1 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 11 0 1147.5721 E5RJU9;Q86UE4;H0YB56 E5RJU9 270 280 MTDH Protein LYRIC yes no 2 3.373E-06 107.39 By MS/MS By MS/MS 1 1 30189000 18845000 11344000 1417 396 1514 3229;3230 2662;2663 2663 445 2 LSSTDDGYIDLQFK SSKVKYSRLSSTDDGY GYIDLQFKKTPPKIPY R L S F K K 0 0 0 3 0 1 0 1 0 1 2 1 0 1 0 2 1 0 1 0 0 0 14 0 1600.7621 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 22 35 TMEM230 Transmembrane protein 230 yes no 2 4.3285E-06 101.95 By MS/MS By matching 1 1 7176000 3369500 3806500 1418 20 1515 3231;3232 2664 2664 18;1890 1 LSSTDDGYIDLQFKK SSKVKYSRLSSTDDGY YIDLQFKKTPPKIPYK R L S K K T 0 0 0 3 0 1 0 1 0 1 2 2 0 1 0 2 1 0 1 0 0 0 15 1 1728.857 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 22 36 TMEM230 Transmembrane protein 230 yes no 2 0.0084645 54.784 By matching By MS/MS 1 1 3604500 2227100 1377400 1419 20 1516 3233;3234 2665 2665 18;1890 1 LSSWVLLMK FNIQHCKKLSSWVLLM SSWVLLMKYLGNATAI K L S M K Y 0 0 0 0 0 0 0 0 0 0 3 1 1 0 0 2 0 1 0 1 0 0 9 0 1075.61 P01009;A0A0G2JRN3;A0A024R6I7 P01009 259 267 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.017491 60.478 By MS/MS By matching 1 1 2628800 2071800 556950 1420 836 1517 3235;3236 2666 2666 130 1 LSSYTECYK LIPIAKKRLSSYTECY SSYTECYKWSSSPENA R L S Y K W 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 2 1 0 2 0 0 0 9 0 1149.5012 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 447 455 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.0020994 88.134 By MS/MS By MS/MS 1 1 3737700 1954500 1783200 1421 108 1518 3237;3238 2667;2668 2667 134 2 LSTHSPFR RPSEWDKRLSTHSPFR LSTHSPFRTLNINGQI R L S F R T 0 1 0 0 0 0 0 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 8 0 943.48756 Q4VB86;P11171;A0A1B0GWG0 Q4VB86 466 473 EPB41 Protein 4.1 yes no 2 0.01748 71.614 By matching By MS/MS 1 1 1462600 745160 717430 1422 887 1519 3239;3240 2669 2669 2107 1 LSVPTSDEEDEVPAPKPR ELMERLKKLSVPTSDE EVPAPKPRGGKKTKGG K L S P R G 1 1 0 2 0 0 3 0 0 0 1 1 0 0 4 2 1 0 0 2 0 0 18 1 1964.9691 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 105 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 2.4556E-11 100.02 By MS/MS By MS/MS 2 2 51801000 26636000 25165000 1423 1163 1520 3241;3242;3243;3244 2670;2671;2672;2673 2672 1360;2175 4 LSVQSNPSPQLR QLSVQQNKLSVQSNPS SNPSPQLRSVMKVESS K L S L R S 0 1 1 0 0 2 0 0 0 0 2 0 0 0 2 3 0 0 0 1 0 0 12 0 1324.7099 E9PBY7;E9PQ61;O75152 E9PBY7 125 136 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.0072247 59.227 By MS/MS By matching 1 1 2033600 1053300 980290 1424 434 1521 3245;3246 2674 2674 513 1 LSVQSNTSPQLRSVMK QLSVQQNKLSVQSNTS PQLRSVMKVESSENVP K L S M K V 0 1 1 0 0 2 0 0 0 0 2 1 1 0 1 4 1 0 0 2 0 0 16 1 1773.9407 A0A1B0GTU1;A0A1B0GUI2 A0A1B0GTU1 125 140 yes no 3 0.011496 45.992 By MS/MS By matching 1 1 1389600 922390 467220 1425 209 1522 3247;3248 2675 2675 260;1937 0 LTCLVAELQK TAAEDNVRLTCLVAEL CLVAELQKQWEVTQAT R L T Q K Q 1 0 0 0 1 1 1 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 10 0 1173.6427 Q9BQS8 Q9BQS8 291 300 FYCO1 FYVE and coiled-coil domain-containing protein 1 yes yes 2 0.0095725 67.169 By MS/MS By matching 1 1 2371300 1512100 859250 1426 1362 1523 3249;3250 2676 2676 1 LTCLVTDLTTYDSVTISWTR IFLTKSTKLTCLVTDL SVTISWTRQNGEAVKT K L T T R Q 0 1 0 2 1 0 0 0 0 1 3 0 0 0 0 2 6 1 1 2 0 0 20 0 2344.1621 A0A087WYJ9;A0A1B0GUU9;P04220;P01871 A0A087WYJ9 241 260 IGHM Ig mu heavy chain disease protein;Ig mu chain C region yes no 2;3 1.1245E-07 88.561 By MS/MS By MS/MS 5 5 13275000 7519200 5755600 1427 58 1524 3251;3252;3253;3254;3255;3256;3257;3258;3259;3260 2677;2678;2679;2680;2681;2682;2683 2678 7 LTEGCSFR QPTGGKARLTEGCSFR LTEGCSFRRKQH____ R L T F R R 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 8 0 968.43857 C9J1C5;H0YMV8;Q71UM5;P42677 C9J1C5 41 48 RPS27L;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 2 0.0011947 107.21 By MS/MS By MS/MS 1 1 8079200 4635300 3443900 1428 316 1525 3261;3262 2684;2685 2685 381 2 LTFDSSFSPNTGK DQLARGLKLTFDSSFS SFSPNTGKKNAKIKTG K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 3 2 0 0 0 0 0 13 0 1399.662 C9JI87;P21796 C9JI87 97 109 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 0.0026454 70.68 By MS/MS By MS/MS 1 1 2070600 921180 1149400 1429 332 1526 3263;3264 2686;2687 2686 395;396 2 LTFDTTFSPNTGK DQICQGLKLTFDTTFS TFSPNTGKKSGKIKSS K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 1 4 0 0 0 0 0 13 0 1427.6933 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880 Q5JSD2 108 120 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2 0.0032361 68.171 By MS/MS By MS/MS 1 1 1560400 749910 810520 1430 93 1527 3265;3266 2688;2689 2689 115 2 LTPGLLSQEAAQKWTYTMR FVLLVICKLTPGLLSQ QKWTYTMREGRWEKRS K L T M R E 2 1 0 0 0 2 1 1 0 0 3 1 1 0 1 1 3 1 1 0 0 0 19 1 2193.1252 A8MX76 A8MX76 335 353 CAPN14 Calpain-14 yes yes 3 0.019835 40.014 By MS/MS 1 0 0 0 1431 244 1528 3267 2690 2690 2292 1 LTPLLSVRESLSEEEAQK WQKTFEEKLTPLLSVR LSEEEAQKMGRKDPEQ K L T Q K M 1 1 0 0 0 1 4 0 0 0 4 1 0 0 1 3 1 0 0 1 0 0 18 1 2028.0739 Q9BXP5;H7C3A1 Q9BXP5 670 687 SRRT Serrate RNA effector molecule homolog yes no 3 0.0055124 42.708 By MS/MS By matching 1 1 1536600 948300 588260 1432 1378 1529 3268;3269 2691 2691 1642;1643;1644 1 LTPVSLSNSPIK VTKELYVKLTPVSLSN SLSNSPIKGADCQEVP K L T I K G 0 0 1 0 0 0 0 0 0 1 2 1 0 0 2 3 1 0 0 1 0 0 12 0 1254.7184 P46100 P46100 590 601 ATRX Transcriptional regulator ATRX yes yes 2 0.0041162 69.345 By MS/MS By MS/MS 1 1 2596100 1194700 1401400 1433 966 1530 3270;3271 2692;2693 2693 1095;1096 2 LTPVSPESSSTEEK EHGGKRSRLTPVSPES ESSSTEEKSSSQPSSC R L T E K S 0 0 0 0 0 0 3 0 0 0 1 1 0 0 2 4 2 0 0 1 0 0 14 0 1489.7148 E7EMC7;Q13501 E7EMC7 268 281 SQSTM1 Sequestosome-1 yes no 2 0.001699 72.815 By MS/MS By MS/MS 1 1 3612700 1970200 1642500 1434 400 1531 3272;3273 2694;2695 2694 448 2 LTRLLQDSLGGNSK HVPYRNSKLTRLLQDS DSLGGNSKTMMCANIG K L T S K T 0 1 1 1 0 1 0 2 0 0 4 1 0 0 0 2 1 0 0 0 0 0 14 1 1500.826 J3KPF9;A0A087X011;E9PES4;Q9Y496 J3KPF9 302 315 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A yes no 2 0.011854 49.5 By MS/MS By matching 1 1 2036300 1210100 826200 1435 66 1532 3274;3275 2696 2696 75 0 LTRPAASPAVGEK SPSPAREKLTRPAASP ASPAVGEKLKKTEPAA K L T E K L 3 1 0 0 0 0 1 1 0 0 1 1 0 0 2 1 1 0 0 1 0 0 13 1 1295.7197 F5H0Q6;A0A0A0MQS2;Q8N2M8 F5H0Q6 541 553 CLASRP CLK4-associating serine/arginine rich protein yes no 3 0.0055946 56.746 By MS/MS By matching 1 1 1625200 636240 988920 1436 91 1533 3276;3277 2697 2697 112 1 LTSMHFYGWKQGLKTGMYYLR IAEPNYGKLTSMHFYG KTGMYYLRTRPAANPI K L T L R T 0 1 0 0 0 1 0 3 1 0 3 2 2 1 0 1 2 1 3 0 0 0 21 2 2579.2817 E9PL69;P23921 E9PL69 498 518 RRM1 Ribonucleoside-diphosphate reductase large subunit yes no 4 0.0061053 40.186 By matching By MS/MS 1 1 6060200 4160800 1899400 1437 461 1534 3278;3279 2698 2698 80 544 1 LTSQSEAMALQSIR ESSKNKSRLTSQSEAM AMALQSIRNMRGNSHC R L T I R N 2 1 0 0 0 2 1 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 14 0 1533.7821 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C0A7 A0A087X1U1 496 509 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.0026205 65.395 By MS/MS By matching 1 1 1395000 864030 531000 1438 76 1535 3280;3281 2699 2699 10 89 1 LTTTGQVTSPVK KKAVVQAKLTTTGQVT GQVTSPVKGASFVTST K L T V K G 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 1 4 0 0 2 0 0 12 0 1230.682 P49916;K7ENR9;K7ERZ5 P49916 202 213 LIG3 DNA ligase 3 yes no 2 8.7402E-20 147.52 By MS/MS 1 13584000 0 13584000 1439 985 1536 3282 2700 2700 1133 1 LTTTGQVTSPVKGASFVTSTNPR KKAVVQAKLTTTGQVT FVTSTNPRKFSGFSAK K L T P R K 1 1 1 0 0 1 0 2 0 0 1 1 0 1 2 3 6 0 0 3 0 0 23 1 2348.2336 P49916;K7ENR9;K7ERZ5 P49916 202 224 LIG3 DNA ligase 3 yes no 3 7.3705E-12 88 By MS/MS By matching 1 1 11307000 5336200 5970700 1440 985 1537 3283;3284 2701 2701 1133 1 LTTTSGQSRK ETLPAGFRLTTTSGQS TTSGQSRKMTTDVASS R L T R K M 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 2 3 0 0 0 0 0 10 1 1077.5778 H0YHK3;G3V200;O75334 H0YHK3 1072 1081 PPFIA2 Liprin-alpha-2 yes no 2 0.010112 45.68 By MS/MS By matching 1 1 752230 379270 372960 1441 553 1538 3285;3286 2702 2702 2022;2023;2024 1 LTVENSPK NFPNEFAKLTVENSPK LTVENSPKQEAGISEG K L T P K Q 0 0 1 0 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 8 0 886.476 F8VVL1;O43583 F8VVL1 68 75 DENR Density-regulated protein yes no 2 1.2012E-13 115.23 By MS/MS By MS/MS 1 2 1817900 619950 1198000 1442 519 1539 3287;3288;3289 2703;2704 2704 608 1 LTWDPTSRQINGYR NVGSNSARLTWDPTSR SRQINGYRIVYNNADG R L T Y R I 0 2 1 1 0 1 0 1 0 1 1 0 0 0 1 1 2 1 1 0 0 0 14 1 1705.8536 Q05707;H0YBB2;J3QT83 Q05707 553 566 COL14A1 Collagen alpha-1(XIV) chain yes no 3 0.012542 42.647 By MS/MS By matching 1 1 2646900 968810 1678100 1443 1053 1540 3290;3291 2705 2705 1 LTWHSCPEDEAQ VIAFYEERLTWHSCPE SCPEDEAQ________ R L T A Q - 1 0 0 1 1 1 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 0 12 0 1471.6038 Q13185 Q13185 172 183 CBX3 Chromobox protein homolog 3 yes yes 2 1.6078E-62 170.89 By MS/MS 1 5132900 0 5132900 1444 1079 1541 3292 2706 2706 1244 1 LTYLRGIYSK NIEDQNRKLTYLRGIY YLRGIYSKKQHKTSCE K L T S K K 0 1 0 0 0 0 0 1 0 1 2 1 0 0 0 1 1 0 2 0 0 0 10 1 1212.6867 A0A0C4DGG5;Q9P2F6 A0A0C4DGG5 400 409 ARHGAP20 Rho GTPase-activating protein 20 yes no 2 0.0071577 45.891 By matching By MS/MS 1 1 854280 395800 458490 1445 155 1542 3293;3294 2707 2707 196;2274;2275 1 LTYPIDRRR L T R R 0 3 0 1 0 0 0 0 0 1 1 0 0 0 1 0 1 0 1 0 0 0 9 2 1188.6727 REV__F8WBE8 yes yes 2 0.012081 52.49 By MS/MS 1 222010 0 222010 + 1446 1529 1543 3295 2708 2708 2519 0 LVAIVDVIDQNR SFGPHAGKLVAIVDVI VDVIDQNRALVDGPCT K L V N R A 1 1 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 3 0 0 12 0 1353.7616 P50914;E7EPB3 P50914 24 35 RPL14 60S ribosomal protein L14 yes no 2 0.0013854 85.377 By MS/MS By MS/MS 1 1 1589400 940840 648600 1447 990 1544 3296;3297 2709;2710 2709 2 LVDQNIFSFYLSR FDNLMQQKLVDQNIFS IFSFYLSRDPDAQPGG K L V S R D 0 1 1 1 0 1 0 0 0 1 2 0 0 2 0 2 0 0 1 1 0 0 13 0 1600.8249 F8WD96;C9JH19;H7C469;A0A1B0GW44;A0A1B0GVP3;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;A0A1B0GU92;A0A1B0GU03;P07339 F8WD96 223 235 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 2 0.0094237 60.255 By MS/MS 1 937550 0 937550 1448 212 1545 3298 2711 2711 1 LVDYLDVGFDTTR YVRTLIERLVDYLDVG DVGFDTTRVAVIQFSD R L V T R V 0 1 0 3 0 0 0 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1512.746 E7ENL6;P12111 E7ENL6 651 663 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.003102 77.64 By MS/MS By MS/MS 1 1 1094300 671470 422870 1449 403 1546 3299;3300 2712;2713 2713 2 LVIITAGAR YNVTANSKLVIITAGA VIITAGARQQEGESRL K L V A R Q 2 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 912.57565 P00338;F5GXH2;F5GYU2;F5GXY2 P00338 91 99 LDHA L-lactate dehydrogenase A chain yes no 2 0.0027622 116.88 By MS/MS 1 715090 715090 0 1450 828 1547 3301 2714 2714 1 LVINGNPITIFQER TVKAENGKLVINGNPI PITIFQERDPSKIKWG K L V E R D 0 1 2 0 0 1 1 1 0 3 1 0 0 1 1 0 1 0 0 1 0 0 14 0 1612.8937 P04406 P04406 67 80 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 0.01622 51.979 By MS/MS By matching 1 1 1393300 1042900 350450 1451 851 1548 3302;3303 2715 2715 1 LVLAESPQPK GEHQQNSKLVLAESPQ LAESPQPKGKNK____ K L V P K G 1 0 0 0 0 1 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1080.6179 E7EUR8;A0A1B0GVL4;P78312 E7EUR8 993 1002 FAM193A Protein FAM193A yes no 2 0.0050583 67.456 By MS/MS By MS/MS 1 1 2494700 1295000 1199700 1452 217 1549 3304;3305 2716;2717 2717 271 2 LVLEVAQHLGESTVR EVQGRETRLVLEVAQH HLGESTVRTIAMDGTE R L V V R T 1 1 0 0 0 1 2 1 1 0 3 0 0 0 0 1 1 0 0 3 0 0 15 0 1649.9101 P06576 P06576 95 109 ATP5B ATP synthase subunit beta, mitochondrial yes yes 3 0.00059925 66.285 By MS/MS By matching 1 1 579100 392960 186140 1453 859 1550 3306;3307 2718 2718 1 LVLLNAIYLSAK DSLPSDTRLVLLNAIY NAIYLSAKWKTTFDPK R L V A K W 2 0 1 0 0 0 0 0 0 1 4 1 0 0 0 1 0 0 1 1 0 0 12 0 1316.8068 H9KV48;P05155 H9KV48 287 298 SERPING1 Plasma protease C1 inhibitor yes no 2 3.4594E-07 107.83 By MS/MS By MS/MS 1 1 3108400 2171900 936420 1454 686 1551 3308;3309 2719;2720 2719 2 LVNEVTEFAK CPFEDHVKLVNEVTEF NEVTEFAKTCVADESA K L V A K T 1 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1148.6077 A0A0C4DGB6;CON__P02768-1;P02768;A0A087WWT3;H7C013 A0A0C4DGB6 66 75 ALB Serum albumin yes no 2 0.0027972 82.749 By MS/MS By matching 1 1 3493500 2648400 845120 + 1455 152 1552 3310;3311 2721 2721 1 LVQDVANNTNEEAGDGTTTATVLAR KYKNIGAKLVQDVANN TTATVLARSIAKEGFE K L V A R S 4 1 3 2 0 1 2 2 0 0 2 0 0 0 0 0 5 0 0 3 0 0 25 0 2559.2413 P10809;C9JL25;E7EXB4;E7ESH4 P10809 97 121 HSPD1 60 kDa heat shock protein, mitochondrial yes no 3 0.00017862 42.166 By MS/MS By matching 1 1 3789100 2084300 1704800 1456 883 1553 3312;3313 2722 2722 1 LVSFHDDSDEDLLHI QKTVSSTKLVSFHDDS SDEDLLHI________ K L V H I - 0 0 0 4 0 0 1 0 2 1 3 0 0 1 0 2 0 0 0 1 0 0 15 0 1753.8159 P11717 P11717 2477 2491 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 3 0.0007444 77.068 By MS/MS By MS/MS 1 1 3223300 1749200 1474100 1457 890 1554 3314;3315 2723;2724 2723 1017 2 LWPMQARSNGTK GFPQDQIRLWPMQARS QARSNGTKRPAMLDNE R L W T K R 1 1 1 0 0 1 0 1 0 0 1 1 1 0 1 1 1 1 0 0 0 0 12 1 1387.7031 H3BND8;Q93009 H3BND8 523 534 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 2 0.0058086 60.478 By MS/MS 1 0 0 0 1458 641 1555 3316 2725 2725 103 755;2047 1 LWSGYSLLYFEGQEK MCPVGMNKLWSGYSLL LYFEGQEKAHNQDLGL K L W E K A 0 0 0 0 0 1 2 2 0 0 3 1 0 1 0 2 0 1 2 0 0 0 15 0 1818.8829 P08572 P08572 1511 1525 COL4A2 Collagen alpha-2(IV) chain;Canstatin yes yes 2 0.0024627 64.199 By matching By MS/MS 1 1 4844100 2494800 2349300 1459 873 1556 3317;3318 2726 2726 1 LYDLNMPAYVK SFVDPGERLYDLNMPA LNMPAYVKF_______ R L Y V K F 1 0 1 1 0 0 0 0 0 0 2 1 1 0 1 0 0 0 2 1 0 0 11 0 1325.669 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333 C9K098 104 114 NCK1 Cytoplasmic protein NCK1 yes no 2 0.004745 72.325 By MS/MS By matching 1 1 1042200 541540 500670 1460 324 1557 3319;3320 2727;2728 2728 2310 2 LYDLPDEPFTR IRKKWNSKLYDLPDEP LPDEPFTRQFYFVHSA K L Y T R Q 0 1 0 2 0 0 1 0 0 0 2 0 0 1 2 0 1 0 1 0 0 0 11 0 1364.6612 Q96NW4 Q96NW4 927 937 ANKRD27 Ankyrin repeat domain-containing protein 27 yes yes 2 0.0087183 67.704 By matching By MS/MS 1 1 1444500 692330 752180 1461 1343 1558 3321;3322 2729 2729 2488 1 LYEEDDLDRLEQMEDSEGTVR FKPGLDMRLYEEDDLD EDSEGTVRQIGAFSEG R L Y V R Q 0 2 0 4 0 1 5 1 0 0 3 0 1 0 0 1 1 0 1 1 0 0 21 1 2541.1177 H0YFE4;Q86W92 H0YFE4 181 201 PPFIBP1 Liprin-beta-1 yes no 3 0.0048402 51.225 By MS/MS By matching 1 1 1513300 928200 585120 1462 617 1559 3323;3324 2730 2730 2357 1 LYEQLSGK EWDDYVPKLYEQLSGK LYEQLSGK________ K L Y G K - 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 8 0 936.49165 P30086 P30086 180 187 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 2 0.017701 77.318 By matching By MS/MS 1 1 887850 610220 277630 1463 941 1560 3325;3326 2731 2731 2405 1 LYEWISIDKDEAGAK ERLGTRERLYEWISID DKDEAGAKSKAPSVSR R L Y A K S 2 0 0 2 0 0 2 1 0 2 1 2 0 0 0 1 0 1 1 0 0 0 15 1 1736.8621 A0A0A0MTP6;O15357 A0A0A0MTP6 819 833 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 3 0.0060115 62.035 By MS/MS 1 0 0 0 1464 131 1561 3327 2732 2732 2270 1 LYGSVCDLR PPRSEVKRLYGSVCDL YGSVCDLRTNKLPGSP R L Y L R T 0 1 0 1 1 0 0 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 9 0 1081.5226 Q8N9U0 Q8N9U0 153 161 TC2N Tandem C2 domains nuclear protein yes yes 2 0.00085721 98.523 By matching By MS/MS 1 1 617210 304430 312780 1465 1263 1562 3328;3329 2733 2733 2474 1 LYLPQEPTSEETPR TPPPKPPRLYLPQEPT PTSEETPRTKRPHMEP R L Y P R T 0 1 0 0 0 1 3 0 0 0 2 0 0 0 3 1 2 0 1 0 0 0 14 0 1658.8152 Q6P5Z2 Q6P5Z2 516 529 PKN3 Serine/threonine-protein kinase N3 yes yes 2 0.0037074 68.893 By MS/MS By matching 1 1 1619600 713470 906180 1466 1196 1563 3330;3331 2734 2734 2470 1 LYLSHNQLSEIPLNLPK LTTKKLRRLYLSHNQL EIPLNLPKSLAELRIH R L Y P K S 0 0 2 0 0 1 1 0 1 1 5 1 0 0 2 2 0 0 1 0 0 0 17 0 1978.0888 Q9BXN1;Q5TBF2 Q9BXN1 155 171 ASPN Asporin yes no 3 0.017534 36.583 By MS/MS By matching 1 1 882280 625060 257220 1467 1377 1564 3332;3333 2735 2735 1 LYLVQGTQVYVFLTK AAFSWEEKLYLVQGTQ QVYVFLTKGGYTLVSG K L Y T K G 0 0 0 0 0 2 0 1 0 0 3 1 0 1 0 0 2 0 2 3 0 0 15 0 1770.992 P02790 P02790 318 332 HPX Hemopexin yes yes 2 0.0023805 71.555 By MS/MS 1 5029800 0 5029800 1468 846 1565 3334 2736 2736 1 LYNTLDDLLLYINAR GRLLEYYRLYNTLDDL LLLYINARELRITYGQ R L Y A R E 1 1 2 2 0 0 0 0 0 1 5 0 0 0 0 0 1 0 2 0 0 0 15 0 1808.9672 Q6UX06 Q6UX06 305 319 OLFM4 Olfactomedin-4 yes yes 2;3 1.544E-292 170.95 By matching By MS/MS 1 2 68048000 31480000 36568000 1469 1206 1566 3335;3336;3337 2737;2738 2738 2 LYTLVTYVPVTTFK EDEDSPNKLYTLVTYV YVPVTTFKNLQTVNVD K L Y F K N 0 0 0 0 0 0 0 0 0 0 2 1 0 1 1 0 4 0 2 3 0 0 14 0 1643.9174 P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8 P62899 102 115 RPL31 60S ribosomal protein L31 yes no 2 0.011389 54.776 By MS/MS 1 568600 568600 0 1470 1026 1567 3338 2739 2739 1 LYVYNDGYLLNYDLSVLQKPQ NYNPFDQKLYVYNDGY LSVLQKPQ________ K L Y P Q - 0 0 2 2 0 2 0 1 0 0 5 1 0 0 1 1 0 0 4 2 0 0 21 1 2517.2791 Q6UX06 Q6UX06 490 510 OLFM4 Olfactomedin-4 yes yes 2;3 6.9722E-43 164.15 By MS/MS By MS/MS 2 3 64200000 36045000 28154000 1471 1206 1568 3339;3340;3341;3342;3343 2740;2741;2742 2742 3 MAAQPSWLVK MAKDYMERMAAQPSWL AQPSWLVKDAPWDEVP R M A V K D 2 0 0 0 0 1 0 0 0 0 1 1 1 0 1 1 0 1 0 1 0 0 10 0 1129.5954 Q9UL01;X6REM1 Q9UL01 133 142 DSE Dermatan-sulfate epimerase yes no 2 0.011581 55.314 By matching By MS/MS 1 1 696640 345320 351310 1472 1470 1569 3344;3345 2743 2743 252 1780 0 MAGRGGAARPNGPAAGNK ________________ NGPAAGNKICQFKLVL - M A N K I 5 2 2 0 0 0 0 5 0 0 0 1 1 0 2 0 0 0 0 0 0 0 18 2 1651.8325 F8VSF8;F8VWU4;F8VVK3;K7ERI8;K7ERQ8;P51148 F8VSF8 1 18 RAB5C Ras-related protein Rab-5C yes no 2 0.01136 51.998 By MS/MS 1 0 0 0 1473 514 1570 3346 2744 2744 85 1 MALDIEIATYR YQDLLNVKMALDIEIA DIEIATYRKLLEGEES K M A Y R K 2 1 0 1 0 0 1 0 0 2 1 0 1 0 0 0 1 0 1 0 0 0 11 0 1294.6591 P08670;B0YJC4;B0YJC5;H7C5W5;P41219 P08670 391 401 VIM;PRPH Vimentin;Peripherin yes no 2 0.0015851 81.525 By MS/MS By MS/MS 1 1 1303100 792530 510620 1474 874 1571 3347;3348 2745;2746 2746 146 2 MAMARRTMFQK MIISKKKRMAMARRTM ARRTMFQKGEVHNKPS R M A Q K G 2 2 0 0 0 1 0 0 0 0 0 1 3 1 0 0 1 0 0 0 0 0 11 2 1369.6781 A0A087WW78;A0A087WW82;U3KPV2;E9PKY3;P0CG08;B7ZAQ6 A0A087WW78 40 50 GPR89B;GPR89A Golgi pH regulator B;Golgi pH regulator A yes no 2 0.00394 61.962 By MS/MS 1 0 0 0 1475 42 1572 3349 2747 2747 4;5 1 MAMVSEFLK ________________ AMVSEFLKQAWFIENE - M A L K Q 1 0 0 0 0 0 1 0 0 0 1 1 2 1 0 1 0 0 0 1 0 0 9 0 1054.5191 Q5T3N0;Q5T3N1;P04083 Q5T3N0 1 9 ANXA1 Annexin;Annexin A1 yes no 2 0.0032953 83.948 By MS/MS By matching 1 1 1953500 981500 972020 1476 849 1573 3350;3351 2748 2748 983 1 MANSSPVLSK SAGRSQKKMANSSPVL NSSPVLSKVPGYGLQV K M A S K V 1 0 1 0 0 0 0 0 0 0 1 1 1 0 1 3 0 0 0 1 0 0 10 0 1032.5274 Q9NXE8 Q9NXE8 214 223 CWC25 Pre-mRNA-splicing factor CWC25 homolog yes yes 2 0.0063913 66.267 By matching By MS/MS 1 1 772910 395490 377420 1477 1439 1574 3352;3353 2749 2749 1744 1 MAPALSGANLTSPR PASLTSARMAPALSGA GANLTSPRVPLSAYER R M A P R V 3 1 1 0 0 0 0 1 0 0 2 0 1 0 2 2 1 0 0 0 0 0 14 0 1384.7133 Q9UQ35 Q9UQ35 2371 2384 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.00061185 82.417 By MS/MS By MS/MS 1 2 2173800 1178300 995480 1478 1487 1575 3354;3355;3356 2750;2751 2751 256 2233 1 MAPPVDDLSPK NCKICIGRMAPPVDDL PVDDLSPKKVKVVVGV R M A P K K 1 0 0 2 0 0 0 0 0 0 1 1 1 0 3 1 0 0 0 1 0 0 11 0 1168.5798 Q92576;E7ER40;E7EVH3 Q92576 1125 1135 PHF3 PHD finger protein 3 yes no 2 0.0019326 78.964 By MS/MS By MS/MS 2 2 9023600 4341400 4682200 1479 1303 1576;1577 3357;3358;3359;3360 2752;2753;2754;2755;2756 2754 224 1538 5 MAPTPIPTRSPSDSSTASTPVAEQIER SHLDSHRRMAPTPIPT PVAEQIERALDEVTSS R M A E R A 3 2 0 1 0 1 2 0 0 2 0 0 1 0 5 5 4 0 0 1 0 0 27 1 2825.3865 Q16643;D6R9Q9 Q16643 328 354 DBN1 Drebrin yes no 3 0.00062033 54.259 By MS/MS By MS/MS 2 1 4141800 1968600 2173100 1480 1137 1578;1579 3361;3362;3363 2757;2758 2757 207 1328 2 MAVTFIGNSTAIQELFK DIPPRGLKMAVTFIGN TAIQELFKRISEQFTA K M A F K R 2 0 1 0 0 1 1 1 0 2 1 1 1 2 0 1 2 0 0 1 0 0 17 0 1868.9706 Q5JP53;P07437;Q5ST81 Q5JP53 345 361 TUBB Tubulin beta chain yes no 2 1.8065E-83 165.7 By MS/MS By MS/MS 3 3 57320000 36044000 21277000 1481 864 1580;1581;1582 3364;3365;3366;3367;3368;3369 2759;2760;2761;2762;2763;2764;2765 2761 11 140 7 MDKNASTFEDVTQVSSAYQK KYGVQKDRMDKNASTF QVSSAYQKTVPVEAVT R M D Q K T 2 0 1 2 0 2 1 0 0 0 0 2 1 1 0 3 2 0 1 2 0 0 20 1 2248.0318 Q14247 Q14247 317 336 CTTN Src substrate cortactin yes yes 3 0.0020132 50.226 By MS/MS 1 3704100 3704100 0 1482 1098 1583 3370 2766 2766 201 2453 1 MDPIYHTR LDIFGPQKMDPIYHTR MDPIYHTRELPTSSAI K M D T R E 0 1 0 1 0 0 0 0 1 1 0 0 1 0 1 0 1 0 1 0 0 0 8 0 1031.4859 Q12923 Q12923 359 366 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.01937 58.23 By MS/MS 1 0 0 0 1483 1072 1584 3371 2767 2767 2446 1 MDSDEDEKEGEEEKVAK EEEHKKQKMDSDEDEK GEEEKVAKRKAAVLSD K M D A K R 1 0 0 3 0 0 6 1 0 0 0 3 1 0 0 1 0 0 0 1 0 0 17 2 1966.8313 Q96ST2 Q96ST2 375 391 IWS1 Protein IWS1 homolog yes yes 3 0.0016201 56.774 By MS/MS 1 3294500 3294500 0 1484 1350 1585 3372 2768 2768 235 1601 1 MDSFDEDLAR REAQVNVRMDSFDEDL SFDEDLARPSGLLAQE R M D A R P 1 1 0 3 0 0 1 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 10 0 1197.4972 Q9Y2W1 Q9Y2W1 573 582 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0030194 72.289 By MS/MS By MS/MS 2 2 1941500 808870 1132600 1485 1501 1586;1587 3373;3374;3375;3376 2769;2770 2770 261 1842 2 MDSNFGLAGLPGSPK PVDMESTRMDSNFGLA AGLPGSPKKRVRIECK R M D P K K 1 0 1 1 0 0 0 3 0 0 2 1 1 1 2 2 0 0 0 0 0 0 15 0 1489.7235 O43463 O43463 379 393 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 yes yes 2 0.0066973 52.071 By MS/MS By matching 1 1 1084000 644390 439630 1486 782 1588 3377;3378 2771 2771 123 909 0 MEALSARQRLK AIEAQKKKMEALSARQ LSARQRLKLGKAAFLH K M E L K L 2 2 0 0 0 1 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 11 2 1301.7238 Q5T5Y3 Q5T5Y3 899 909 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 2 0.0126 53.756 By MS/MS 1 0 0 0 1487 1170 1589 3379 2772 2772 1 MENYELIHSSR FGNKTTGKMENYELIH YELIHSSRVKFTYPSE K M E S R V 0 1 1 0 0 0 2 0 1 1 1 0 1 0 0 2 0 0 1 0 0 0 11 0 1377.6347 Q9Y2I1 Q9Y2I1 1304 1314 NISCH Nischarin yes yes 2;3 0.0031993 78.513 By MS/MS By MS/MS 3 3 4913200 2801500 2111700 1488 1497 1590;1591 3380;3381;3382;3383;3384;3385 2773;2774;2775 2775 260 2514 3 METVSNASSSSNPSSPGR QSQTKSSRMETVSNAS SNPSSPGRIKGRLDSS R M E G R I 1 1 2 0 0 0 1 1 0 0 0 0 1 0 2 7 1 0 0 1 0 0 18 0 1793.785 Q9NTI5;A9IYQ1 Q9NTI5 1152 1169 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 2.2423E-96 165.66 By MS/MS By matching 2 1 2605400 1662600 942800 1489 1427 1592;1593 3386;3387;3388 2776;2777 2776 244 1733;1734 2 MFLSFPTTK YGAEALERMFLSFPTT FLSFPTTKTYFPHFDL R M F T K T 0 0 0 0 0 0 0 0 0 0 1 1 1 2 1 1 2 0 0 0 0 0 9 0 1070.5471 CON__P01966;G3V1N2;P69905 G3V1N2 33 41 HBA2;HBA1 Hemoglobin subunit alpha no no 2 0.0031856 84.498 By MS/MS 1 669660 669660 0 + 1490 351;549 1594 3389 2778 2778 57 1 MGPTELLIEMEDWK DKISQLTRMGPTELLI LIEMEDWKGDKVKAHY R M G W K G 0 0 0 1 0 0 3 1 0 1 2 1 2 0 1 0 1 1 0 0 0 0 14 0 1690.7946 D6REL8;P02675 D6REL8 116 129 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 2 7.944E-149 190.46 By MS/MS By MS/MS 1 1 19224000 12592000 6631600 1491 376 1595 3390;3391 2779;2780 2779 60 2 MHIEKDETPLSTPTAR DMGHESKRMHIEKDET PLSTPTARDSLDKLSL R M H A R D 1 1 0 1 0 0 2 0 1 1 1 1 1 0 2 1 3 0 0 0 0 0 16 1 1824.904 A0A087WZP2;Q9UI36 A0A087WZP2 571 586 DACH1 Dachshund homolog 1 yes no 3 0.001241 56.017 By MS/MS By MS/MS 1 1 2956400 1455700 1500600 1492 63 1596 3392;3393 2781;2782 2782 69;1907 2 MKKVGTAQTK IDPWKFQRMKKVGTAQ KVGTAQTKIQLLLLGD R M K T K I 1 0 0 0 0 1 0 1 0 0 0 3 1 0 0 0 2 0 0 1 0 0 10 2 1090.6169 Q9BVV2 Q9BVV2 111 120 C20orf195 Uncharacterized protein C20orf195 yes yes 2 0.010315 44.299 By matching By MS/MS 1 1 4164900 1108100 3056800 1493 1371 1597 3394;3395 2783 2783 2213;2214 1 MKSLEQDALR RALWRAARMKSLEQDA SLEQDALRAQMVLSRS R M K L R A 1 1 0 1 0 1 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 10 1 1189.6125 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1425 1434 SCRIB Protein scribble homolog yes no 2;3 0.0040405 74.698 By MS/MS By MS/MS 3 3 12438000 6366700 6071200 1494 178 1598;1599 3396;3397;3398;3399;3400;3401 2784;2785;2786;2787 2785 28 222 4 MKTITRLHK ________________ KTITRLHKAMVFLEYF M M K H K A 0 1 0 0 0 0 0 0 1 1 1 2 1 0 0 0 2 0 0 0 0 0 9 2 1126.6645 E9PPB8 E9PPB8 2 10 FAR1 yes yes 2 0.018772 41.164 By MS/MS 1 0 0 0 1495 472 1600 3402 2788 2788 81 1 MKTPLSAFSEK FADRLPEKMKTPLSAF PLSAFSEKLSSDAVTQ K M K E K L 1 0 0 0 0 0 1 0 0 0 1 2 1 1 1 2 1 0 0 0 0 0 11 1 1237.6377 A0A087WV20;A0A087WTU9;A0A087WZY3;Q8TCU4 A0A087WV20 3185 3195 ALMS1 Alstrom syndrome protein 1 yes no 3 0.0056896 62.14 By MS/MS 1 0 0 0 1496 22 1601 3403 2789 2789 1892 1 MLENTDNSSPSTEHSQGLEK YKHMKLHKMLENTDNS EHSQGLEKQGVHAAGA K M L E K Q 0 0 2 1 0 1 3 1 1 0 2 1 1 0 1 4 2 0 0 0 0 0 20 0 2202.9699 Q96H79 Q96H79 249 268 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 3 0.0026741 46.543 By MS/MS 1 722910 722910 0 1497 1333 1602 3404 2790 2790 230 1572 1 MLLADQGQSWKEEVVTVETWQEGSLK RGRCAALRMLLADQGQ TWQEGSLKASCLYGQL R M L L K A 1 0 0 1 0 3 4 2 0 0 3 2 1 0 0 2 2 2 0 3 0 0 26 1 2990.4695 P09211;A0A087X2E9;A8MX94 P09211 20 45 GSTP1 Glutathione S-transferase P yes no 3 1.4776E-05 71.54 By MS/MS By MS/MS 1 1 5905300 3293900 2611300 1498 875 1603 3405;3406 2791;2792 2791 147 2 MLNQSENAKK AWLEDAEKMLNQSENA NQSENAKKDFFRNLPH K M L K K D 1 0 2 0 0 1 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 10 1 1161.5812 F5H422;F5H4Q0;F5GXQ8;E7ENN3;A0A0C4DG40;Q8NF91 F5H422 202 211 SYNE1 Nesprin-1 yes no 2 0.0064578 51.193 By matching By MS/MS 1 1 777040 421460 355580 1499 148 1604 3407;3408 2793 2793 20 1 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR QRLFENLRMLPHAPGV DEDDPDKRISICSSDK R M L K R I 3 1 0 6 0 2 5 2 1 2 1 1 2 0 5 1 0 0 0 1 0 0 33 1 3630.609 Q13547 Q13547 372 404 HDAC1 Histone deacetylase 1 yes yes 4 0.0027365 49.888 By matching By MS/MS 1 1 11508000 4756000 6751700 1500 1088 1605 3409;3410 2794 2794 197;198 1256 1 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR QRLFENLRMLPHAPGV DGEDPDKRISIRASDK R M L K R I 3 1 0 6 0 2 4 3 2 1 1 1 2 0 4 1 0 0 0 2 0 0 33 1 3584.5784 Q92769 Q92769 373 405 HDAC2 Histone deacetylase 2 yes yes 4 1.5516E-07 58.47 By MS/MS By MS/MS 2 2 32860000 18015000 14845000 1501 1311 1606;1607 3411;3412;3413;3414 2795;2796;2797 2796 226;227 1547 3 MLSQDAPTVK SKMEQKFRMLSQDAPT SQDAPTVKESCKTSSN R M L V K E 1 0 0 1 0 1 0 0 0 0 1 1 1 0 1 1 1 0 0 1 0 0 10 0 1088.5536 A0A0C4DG07;O60934 A0A0C4DG07 313 322 NBN Nibrin yes no 2 0.010792 62.338 By MS/MS 1 684890 0 684890 1502 145 1608 3415 2798 2798 183 1 MLSSTQNAGGSYQR ________________ NAGGSYQRVRGALDTQ - M L Q R V 1 1 1 0 0 2 0 2 0 0 1 0 1 0 0 3 1 0 1 0 0 0 14 0 1498.6834 Q9NSE7 Q9NSE7 1 14 ABCC13 Putative ATP-binding cassette sub-family C member 13 yes yes 2 0.017307 45.359 By MS/MS 1 278840 278840 0 1503 1424 1609 3416 2799 2799 243 0 MNSTGGQTPR EQMPQRRRMNSTGGQT STGGQTPRRDLEKVLT R M N P R R 0 1 1 0 0 1 0 2 0 0 0 0 1 0 1 1 2 0 0 0 0 0 10 0 1047.4767 Q96ST2;A0A1B0GW95 Q96ST2 718 727 IWS1 Protein IWS1 homolog yes no 2 0.0029073 70.685 By MS/MS By MS/MS 1 1 1133200 704950 428290 1504 1350 1610 3417;3418 2800;2801 2801 236 1602 0 MNSYPYLADR PSSQRKVRMNSYPYLA SYPYLADRHYSREQRY R M N D R H 1 1 1 1 0 0 0 0 0 0 1 0 1 0 1 1 0 0 2 0 0 0 10 0 1228.5547 G3V1T9;J3KPD3;Q9Y580 G3V1T9 82 91 RBM7 RNA-binding protein 7 yes no 2 0.00414 69.216 By matching By MS/MS 1 1 1214500 630360 584150 1505 551 1611 3419;3420 2802 2802 648 1 MNTLSSNRANMLK SGQVMALKMNTLSSNR SNRANMLKEVQLMNRL K M N L K E 1 1 3 0 0 0 0 0 0 0 2 1 2 0 0 2 1 0 0 0 0 0 13 1 1478.7334 Q96S53 Q96S53 88 100 TESK2 Dual specificity testis-specific protein kinase 2 yes yes 2 0.015652 45.598 By MS/MS 1 0 0 0 1506 1349 1612 3421 2803 2803 234 1 MNTQKGSLTINVHR ________________ SLTINVHRGSLAMSIQ - M N H R G 0 1 2 0 0 1 0 1 1 1 1 1 1 0 0 1 2 0 0 1 0 0 14 1 1597.8359 A0A140T8X2;Q6ZTR5 A0A140T8X2 1 14 CXorf22 Uncharacterized protein CXorf22 yes no 2 0.01335 48.823 By MS/MS 1 0 0 0 1507 204 1613 3422 2804 2804 35 1 MPCAEDYLSVVLNQLCVLHEK CKHPEAKRMPCAEDYL QLCVLHEKTPVSDRVT R M P E K T 1 0 1 1 2 1 2 0 1 0 4 1 1 0 1 1 0 0 1 3 0 0 21 0 2517.2066 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 470 490 ALB Serum albumin yes no 3 2.1682E-49 138.46 By MS/MS By MS/MS 2 2 38809000 21705000 17104000 + 1508 152 1614;1615 3423;3424;3425;3426 2805;2806;2807 2805 23 3 MPCESSPPESADTPTSTR VAAGKTTKMPCESSPP ADTPTSTRRQPKTPLE K M P T R R 1 1 0 1 1 0 2 0 0 0 0 0 1 0 4 4 3 0 0 0 0 0 18 0 1948.8143 P46013 P46013 1371 1388 MKI67 Antigen KI-67 yes yes 2 0.0021131 61.641 By MS/MS By matching 1 1 2958600 1464000 1494600 1509 964 1616 3427;3428 2808 2808 1090 1 MPEILVSER KQKRKKKKMPEILVSE PEILVSERQGFFSAVC K M P E R Q 0 1 0 0 0 0 2 0 0 1 1 0 1 0 1 1 0 0 0 1 0 0 9 0 1072.5587 B5MBX0 B5MBX0 222 230 CDCA5 yes yes 2 0.017618 61.65 By MS/MS 1 574810 574810 0 1510 274 1617 3429 2809 2809 49 1 MPFQTSPGGK SPGKLLVKMPFQTSPG FQTSPGGKAEGGGATT K M P G K A 0 0 0 0 0 1 0 2 0 0 0 1 1 1 2 1 1 0 0 0 0 0 10 0 1048.5012 A0A087X1U4;P51608 A0A087X1U4 220 229 MECP2 Methyl-CpG-binding protein 2 yes no 2 0.00018845 95.483 By matching By MS/MS 1 1 2699000 1211300 1487700 1511 77 1618 3430;3431 2810 2810 90 1 MPMYSLGMAHHTPK CLISPNWRMPMYSLGM GMAHHTPKSIFAAWCF R M P P K S 1 0 0 0 0 0 0 1 2 0 1 1 3 0 2 1 1 0 1 0 0 0 14 0 1599.736 F8WDS5 F8WDS5 136 149 POLR3H yes yes 2 0.018295 41.704 By MS/MS 1 0 0 0 1512 541 1619 3432 2811 2811 90;91 2348 1 MPQDGSDDEDEEWPTLEK RTTRLGPRMPQDGSDD EEWPTLEKAATMTAAG R M P E K A 0 0 0 4 0 1 4 1 0 0 1 1 1 0 2 1 1 1 0 0 0 0 18 0 2119.8528 F8WBL2;Q13895 F8WBL2 93 110 BYSL Bystin yes no 2 1.8605E-32 133.98 By MS/MS By MS/MS 2 2 34986000 19184000 15802000 1513 536 1620;1621 3433;3434;3435;3436 2812;2813;2814;2815 2815 89 629 4 MQASIEKGGSLPK SVEDIKAKMQASIEKG EKGGSLPKVEAKFINY K M Q P K V 1 0 0 0 0 1 1 2 0 1 1 2 1 0 1 2 0 0 0 0 0 0 13 1 1344.7071 P06748 P06748 251 263 NPM1 Nucleophosmin yes yes 2 0.0062539 66.004 By MS/MS By MS/MS 1 1 2379700 1376400 1003400 1514 861 1622 3437;3438 2816;2817 2816 989 2 MQKASHKNK ________________ QKASHKNKKERGVSNK - M Q N K K 1 0 1 0 0 1 0 0 1 0 0 3 1 0 0 1 0 0 0 0 0 0 9 2 1070.5655 E5RJ18;Q8IXQ8 E5RJ18 1 9 PDZD9 PDZ domain-containing protein 9 yes no 2 0.0046685 61.999 By MS/MS 1 0 0 0 1515 393 1623 3439 2818 2818 65 1 MQNNEELPTYEEAK MEKQLSPRMQNNEELP LPTYEEAKVQSQYFRG R M Q A K V 1 0 2 0 0 1 4 0 0 0 1 1 1 0 1 0 1 0 1 0 0 0 14 0 1694.7458 Q4VCS5 Q4VCS5 100 113 AMOT Angiomotin yes yes 2 1.3335E-228 206.1 By MS/MS By MS/MS 1 1 8779200 5143900 3635300 1516 1147 1624 3440;3441 2819;2820 2819 210 2168;2464 2 MQNNEELPTYEEAKVQSQYFR MEKQLSPRMQNNEELP KVQSQYFRGQQHASVG R M Q F R G 1 1 2 0 0 3 4 0 0 0 1 1 1 1 1 1 1 0 2 1 0 0 21 1 2603.1962 Q4VCS5 Q4VCS5 100 120 AMOT Angiomotin yes yes 3 0.0010591 67.579 By MS/MS By matching 1 1 3024700 1933000 1091800 1517 1147 1625 3442;3443 2821 2821 210 2168;2464 1 MQSLQLDCVAVPSSR NENAVVKRMQSLQLDC CVAVPSSRSNSATEQP R M Q S R S 1 1 0 1 1 2 0 0 0 0 2 0 1 0 1 3 0 0 0 2 0 0 15 0 1689.8178 Q13546 Q13546 318 332 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 2 0.0077537 51.495 By MS/MS By matching 1 1 1229300 692910 536350 1518 1087 1626 3444;3445 2822 2822 196 1255 1 MQSLSLNK DATLSGKRMQSLSLNK MQSLSLNK________ R M Q N K - 0 0 1 0 0 1 0 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 8 0 919.4797 Q13442 Q13442 174 181 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 2 0.010844 76.943 By matching By MS/MS 1 1 3069500 1354300 1715200 1519 1084 1627 3446;3447 2823 2823 1251 1 MRDVVLSIVNDLTIAESNCPR VNQDTFGRMRDVVLSI IAESNCPRGARVAVVT R M R P R G 1 2 2 2 1 0 1 0 0 2 2 0 1 0 1 2 1 0 0 3 0 0 21 1 2401.2094 E7ENL6;P12111 E7ENL6 1813 1833 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.0060965 41.257 By matching By MS/MS 1 1 3152900 1379100 1773800 1520 403 1628 3448;3449 2824 2824 67 1 MREDYDSVEQDGDEPGPQR SEEGSRARMREDYDSV GDEPGPQRSVEGWILF R M R Q R S 0 2 0 4 0 2 3 2 0 0 0 0 1 0 2 1 0 0 1 1 0 0 19 1 2221.9182 Q9Y5S9 Q9Y5S9 50 68 RBM8A RNA-binding protein 8A yes yes 3 0.00099181 58.864 By MS/MS By MS/MS 2 2 5052500 2472100 2580300 1521 1515 1629;1630 3450;3451;3452;3453 2825;2826 2826 1859 2 MSGFIYQGK LMLSASPRMSGFIYQG SGFIYQGKLPTTGMTI R M S G K L 0 0 0 0 0 1 0 2 0 1 0 1 1 1 0 1 0 0 1 0 0 0 9 0 1029.4954 E9PDQ5;B1ALK7;Q15052;Q14155;F6SJA5;E7EUY6 E9PDQ5 261 269 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 6;Rho guanine nucleotide exchange factor 7 yes no 2 0.0036444 82.831 By MS/MS By MS/MS 1 1 4856600 3105900 1750700 1522 253 1631 3454;3455 2827;2828 2827 43 325 2 MSLNEHSMQALSWR ________________ SMQALSWRKLYLSRAK - M S W R K 1 1 1 0 0 1 1 0 1 0 2 0 2 0 0 3 0 1 0 0 0 0 14 0 1688.7763 A0A087WTK9;A0A0B4J2E8 A0A087WTK9 1 14 ORAI1 yes no 2 0.0072317 51.127 By MS/MS 1 2778600 2778600 0 1523 16 1632 3456 2829 2829 12;13 1 MSQPGSPSPK AEVEENKKMSQPGSPS QPGSPSPKTPTPSTPG K M S P K T 0 0 0 0 0 1 0 1 0 0 0 1 1 0 3 3 0 0 0 0 0 0 10 0 1014.4804 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 1523 1532 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0024414 74.611 By MS/MS By MS/MS 2 3 8676800 4419500 4257300 1524 156 1633;1634 3457;3458;3459;3460;3461 2830;2831;2832;2833;2834;2835 2831 25 197;198 6 MTEVQAMVEFSVELNK ________________ EFSVELNKFYNVDLFQ - M T N K F 1 0 1 0 0 1 3 0 0 0 1 1 2 1 0 1 1 0 0 3 0 0 16 0 1853.8903 D6RFG9;D6REA8;H7BXC5;D6RC17;D6RCC7;Q9P2D6 D6RFG9 1 16 FAM135A Protein FAM135A yes no 2 0.0059515 56.359 By matching By MS/MS 1 1 2302800 969860 1332900 1525 374 1635 3462;3463 2836 2836 434;1966 1 MTVHNLYLFDR ________________ HNLYLFDRNGVCLHYS - M T D R N 0 1 1 1 0 0 0 0 1 0 2 0 1 1 0 0 1 0 1 1 0 0 11 0 1407.6969 I3L1R8;I3L3V5;I3L3S0;Q9Y5R8 I3L1R8 1 11 TRAPPC1 Trafficking protein particle complex subunit 1 yes no 2 0.015884 45.915 By MS/MS 1 0 0 0 1526 691 1636 3464 2837 2837 110 2367 1 MVEPENAVTITPLRPEDDYSPR QMRVWRERMVEPENAV PEDDYSPRERRGGGLR R M V P R E 1 2 1 2 0 0 3 0 0 1 1 0 1 0 4 1 2 0 1 2 0 0 22 1 2528.2217 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YDF9 A0A0G2JMS7 735 756 SCRIB Protein scribble homolog yes no 3 0.0014813 53.865 By MS/MS By MS/MS 2 2 8856700 5557400 3299300 1527 178 1637 3465;3466;3467;3468 2838;2839;2840 2839 29 223;1932;1933 3 MWNSTFQTYKK EDYPRTCRMWNSTFQT STFQTYKKEVCLPRHS R M W K K E 0 0 1 0 0 1 0 0 0 0 0 2 1 1 0 1 2 1 1 0 0 0 11 1 1432.6809 H3BMH7 H3BMH7 129 139 yes yes 2 0.015049 52.247 By MS/MS 1 0 0 0 1528 635 1638 3469 2841 2841 102 1 MYLGYEYVTAIR VPPRMDAKMYLGYEYV YEYVTAIRNLREGTCP K M Y I R N 1 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 1 0 3 1 0 0 12 0 1477.7275 P02787 P02787 332 343 TF Serotransferrin yes yes 2 0.0018561 78.655 By MS/MS By MS/MS 2 2 10262000 6264100 3997600 1529 845 1639;1640 3470;3471;3472;3473 2842;2843;2844 2844 132 3 MYPPRSPK PPFLPVGRMYPPRSPK MYPPRSPKSAAPAPIS R M Y P K S 0 1 0 0 0 0 0 0 0 0 0 1 1 0 3 1 0 0 1 0 0 0 8 1 974.50077 H3BUF6;Q8WWM7 H3BUF6 450 457 ATXN2L Ataxin-2-like protein yes no 2 0.01782 77.533 By MS/MS By matching 1 1 11951000 5304500 6646400 1530 667 1641 3474;3475 2845 2845 1 NAASFPLRSPQPVCSPAGSEGTPK DGDSSTMRNAASFPLR AGSEGTPKGSRPPLIL R N A P K G 3 1 1 0 1 1 1 2 0 0 1 1 0 1 5 4 1 0 0 1 0 0 24 1 2454.1962 Q6KC79 Q6KC79 266 289 NIPBL Nipped-B-like protein yes yes 3 3.6363E-05 75.057 By MS/MS By matching 1 1 2161900 1341100 820810 1531 1189 1642 3476;3477 2846 2846 1398 1 NAEAVLQSPGLSGK VLTVDYTRNAEAVLQS QSPGLSGKVKRDAEKK R N A G K V 2 0 1 0 0 1 1 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1369.7201 Q13045 Q13045 849 862 FLII Protein flightless-1 homolog yes yes 2 2.6607E-08 107.18 By MS/MS By MS/MS 1 1 4584800 2496100 2088700 1532 1076 1643 3478;3479 2847;2848 2847 1235 2 NAEDCLYELPENIR EEQKVKPKNAEDCLYE YELPENIRVSSAKKTE K N A I R V 1 1 2 1 1 0 3 0 0 1 2 0 0 0 1 0 0 0 1 0 0 0 14 0 1734.7883 Q9NZ63 Q9NZ63 141 154 C9orf78 Uncharacterized protein C9orf78 yes yes 2;3 0.0076471 57.175 By MS/MS By matching 2 2 5602800 2927000 2675800 1533 1444 1644 3480;3481;3482;3483 2849;2850 2849 2505 2 NAFACFDEEATGTIQEDYLR TDPEDVIRNAFACFDE TIQEDYLRELLTTMGD R N A L R E 3 1 1 2 1 1 3 1 0 1 1 0 0 2 0 0 2 0 1 0 0 0 20 0 2349.0219 J3QRS3;P19105;O14950 J3QRS3 110 129 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 2;3 5.2426E-07 84.581 By MS/MS By MS/MS 2 1 15660000 14847000 813460 1534 718 1645 3484;3485;3486 2851;2852;2853 2852 3 NAGSRSSSRENR DPQSRSLKNAGSRSSS RSSSRENRATSGEGAQ K N A N R A 1 3 2 0 0 0 1 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 12 2 1319.629 O43247 O43247 95 106 TEX33 Testis-expressed sequence 33 protein yes yes 2 0.011422 52.891 By MS/MS 1 1145500 1145500 0 1535 778 1646 3487 2854 2854 904;905 1 NAHSATTWSGQYVGGAEAR VAWKNNYRNAHSATTW YVGGAEARINTQWLLT R N A A R I 4 1 1 0 0 1 1 3 1 0 0 0 0 0 0 2 2 1 1 1 0 0 19 0 1961.898 CON__Streptavidin CON__Streptavidin 86 104 yes yes 3 0.00098663 70.413 By MS/MS By MS/MS 1 1 54880000 37808000 17071000 + 1536 359 1647 3488;3489 2855;2856 2855 2 NALFCLESAWK TVTHPVVRNALFCLES FCLESAWKTAQEGDHG R N A W K T 2 0 1 0 1 0 1 0 0 0 2 1 0 1 0 1 0 1 0 0 0 0 11 0 1337.6438 P01023 P01023 1123 1133 A2M Alpha-2-macroglobulin yes yes 2 0.0050768 72.325 By matching By MS/MS 1 1 1036200 575770 460450 1537 837 1648 3490;3491 2857 2857 1 NALPPVLTTVNGQSPPEHSAPAK PKVNPWTKNALPPVLT PEHSAPAKVVRAAVPK K N A A K V 3 0 2 0 0 1 1 1 1 0 2 1 0 0 5 2 2 0 0 2 0 0 23 0 2324.2125 A0A0B4J210;Q6PKG0;H0YBM7 A0A0B4J210 130 152 LARP1 La-related protein 1 yes no 3 0.00091207 54.225 By matching By MS/MS 1 1 7249400 4807000 2442400 1538 139 1649 3492;3493 2858 2858 172 1 NAPAAVDEGSISPR NRRQARGRNAPAAVDE DEGSISPRTLSAIKRA R N A P R T 3 1 1 1 0 0 1 1 0 1 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1382.679 R4GMW8;P28715 R4GMW8 799 812 BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells yes no 2 0.0047078 56.872 By matching By MS/MS 1 1 5351800 3028800 2323000 1539 936 1650 3494;3495 2859 2859 1053 1 NASTFEDVTQVSSAYQK VQKDRMDKNASTFEDV QVSSAYQKTVPVEAVT K N A Q K T 2 0 1 1 0 2 1 0 0 0 0 1 0 1 0 3 2 0 1 2 0 0 17 0 1873.8694 Q14247 Q14247 320 336 CTTN Src substrate cortactin yes yes 3 0.0011147 57.595 By MS/MS By matching 1 1 2769500 1525000 1244500 1540 1098 1651 3496;3497 2860 2860 2453 1 NATDLQNSSMSEEELTK ETLSGLAKNATDLQNS MSEEELTKAMEGLGMD K N A T K A 1 0 2 1 0 1 3 0 0 0 2 1 1 0 0 3 2 0 0 0 0 0 17 0 1895.8419 Q5QNY5;H0YJ60;P40855 Q5QNY5 119 135 PEX19 Peroxisomal biogenesis factor 19 yes no 2 0.0023641 59.185 By MS/MS By MS/MS 1 1 5237700 2858400 2379300 1541 621 1652 3498;3499 2861;2862 2861 743;744 2 NAVALSASPQLK LALANSSRNAVALSAS LSASPQLKEAQSEKEE R N A L K E 3 0 1 0 0 1 0 0 0 0 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1197.6717 Q92547 Q92547 881 892 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 0.001047 83.53 By matching By MS/MS 1 1 2672400 1619600 1052800 1542 1302 1653 3500;3501 2863 2863 1537 1 NAVIGNNKQK ________________ VIGNNKQKANLIVLGA K N A Q K A 1 0 3 0 0 1 0 1 0 1 0 2 0 0 0 0 0 0 0 1 0 0 10 1 1084.5989 C9J8P8;C9JAA7;C9JBY2;G5E9V7;G5E9V6;B7Z637;Q8IUR7 C9J8P8 3 12 ARMC8 Armadillo repeat-containing protein 8 yes no 2 0.007765 66.429 By MS/MS By matching 1 1 1755400 737970 1017400 1543 288 1654 3502;3503 2864 2864 1 NAVTQFVSSMSASADVLALAK VGVAYAAKNAVTQFVS ADVLALAKIEIKLSDI K N A A K I 5 0 1 1 0 1 0 0 0 0 2 1 1 1 0 4 1 0 0 3 0 0 21 0 2109.0776 P47985;P0C7P4 P47985 131 151 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 yes no 3 0.0046214 47.499 By MS/MS By matching 1 1 1961900 1155800 806160 1544 878 1655 3504;3505 2865 2865 148 1 NCPPSPLPLISK STNRQIQKNCPPSPLP SPLPLISKQSPQTSFP K N C S K Q 0 0 1 0 1 0 0 0 0 1 2 1 0 0 4 2 0 0 0 0 0 0 12 0 1321.7064 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 479 490 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.0016213 80.312 By MS/MS By MS/MS 1 2 2744600 1440500 1304100 1545 108 1656 3506;3507;3508 2866;2867;2868 2866 135 3 NDAPTPGTSTTPGLR KSNTPTPRNDAPTPGT TSTTPGLRSMPGKPPG R N D L R S 1 1 1 1 0 0 0 2 0 0 1 0 0 0 3 1 4 0 0 0 0 0 15 0 1483.7267 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 324 338 TLE3 Transducin-like enhancer protein 3 yes no 2 9.2616E-05 96.067 By MS/MS By MS/MS 2 1 5292200 3563000 1729200 1546 505 1657 3509;3510;3511 2869;2870;2871 2870 2011;2012 3 NDEELNKLLGK RHLQLAIRNDEELNKL ELNKLLGKVTIAQGGV R N D G K V 0 0 2 1 0 0 2 1 0 0 3 2 0 0 0 0 0 0 0 0 0 0 11 1 1271.6721 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9 A0A0U1RR32 90 100 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A yes no 2 0.0089195 63.694 By MS/MS By matching 1 1 940920 660440 280480 1547 200 1658 3512;3513 2872 2872 1 NDFQLIGIQDGYLSLLQDSGEVR MDVPNIKRNDFQLIGI LQDSGEVREDLRLPEG R N D V R E 0 1 1 3 0 3 1 3 0 2 4 0 0 1 0 2 0 0 1 1 0 0 23 0 2579.2867 I3L397;I3L504;P63241 I3L397 87 109 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 2;3 1.1616E-25 107.85 By MS/MS By MS/MS 2 2 33479000 16073000 17406000 1548 693 1659 3514;3515;3516;3517 2873;2874;2875;2876 2873 4 NDKSEEEQSSSSVK SKQAVEMKNDKSEEEQ EQSSSSVKKDETNVKM K N D V K K 0 0 1 1 0 1 3 0 0 0 0 2 0 0 0 5 0 0 0 1 0 0 14 1 1552.6853 G3V4W0;B4DY08;B2R5W2;G3V4C1;G3V2Q1;P07910;G3V5V7;G3V2D6 G3V4W0 217 230 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2 2.6303E-13 125.39 By MS/MS By matching 1 1 8706700 8362000 344730 1549 259 1660 3518;3519 2877 2877 329 1 NDLAVVDVR GISDVFAKNDLAVVDV DLAVVDVRIGMTRKFG K N D V R I 1 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 9 0 999.53491 P19338 P19338 334 342 NCL Nucleolin yes yes 2 0.0016946 94.692 By MS/MS By matching 1 1 779480 505680 273800 1550 914 1661 3520;3521 2878 2878 1 NDLQDTEISPR EAWEASHKNDLQDTEI QDTEISPRQNRRTRAA K N D P R Q 0 1 1 2 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1286.6103 Q9NS91 Q9NS91 463 473 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 2 5.741E-06 128.9 By MS/MS By MS/MS 1 1 10363000 5800200 4563200 1551 1423 1662 3522;3523 2879;2880 2879 1724 2 NDSVIVADQTPTPTR TLKFGPARNDSVIVAD DQTPTPTRFLKNCEEV R N D T R F 1 1 1 2 0 1 0 0 0 1 0 0 0 0 2 1 3 0 0 2 0 0 15 0 1612.8057 E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336 E9PEK8 60 74 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes no 2 8.9165E-15 126.63 By MS/MS By MS/MS 1 2 4147100 868750 3278300 1552 301 1663;1664 3524;3525;3526 2881;2882 2882 1958;1959 2 NEDSLVFVQTDK KRTTVMVKNEDSLVFV LVFVQTDKSIYKPGQT K N E D K S 0 0 1 2 0 1 1 0 0 0 1 1 0 1 0 1 1 0 0 2 0 0 12 0 1393.6725 P01023;F8W7L3 P01023 124 135 A2M Alpha-2-macroglobulin yes no 2 0.0067805 69.979 By MS/MS By matching 1 1 479470 261380 218090 1553 837 1665 3527;3528 2883 2883 1 NEEENIYSVPHDSTQGK MDAVVKPRNEEENIYS PHDSTQGKIITIRNIN R N E G K I 0 0 2 1 0 1 3 1 1 1 0 1 0 0 1 2 1 0 1 1 0 0 17 0 1945.8654 Q9NRY4 Q9NRY4 1099 1115 ARHGAP35 Rho GTPase-activating protein 35 yes yes 2;3 1.5279E-20 126.32 By MS/MS By MS/MS 2 2 17221000 9700300 7520300 1554 1422 1666 3529;3530;3531;3532 2884;2885;2886;2887 2885 1723;2499 4 NEEPSEEEIDAPKPK SKTKKVTKNEEPSEEE EIDAPKPKKMKKEKEM K N E P K K 1 0 1 1 0 0 5 0 0 1 0 2 0 0 3 1 0 0 0 0 0 0 15 1 1710.7948 Q9NR30 Q9NR30 117 131 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 2.1197E-35 149.3 By MS/MS By MS/MS 2 2 35891000 17226000 18665000 1555 1418 1667 3533;3534;3535;3536 2888;2889;2890;2891;2892 2892 1717 4 NEEPVRSPERR FRQRISTKNEEPVRSP PVRSPERRDRKASANA K N E R R D 0 3 1 0 0 0 3 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 11 2 1367.6906 Q92922 Q92922 304 314 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3 0.016854 59.418 By matching By MS/MS 1 1 23813000 13365000 10448000 1556 1317 1668 3537;3538 2893 2893 1 NEIIQSPISQVPSVEK NETGDITRNEIIQSPI SQVPSVEKLSMNTGNE R N E E K L 0 0 1 0 0 2 2 0 0 3 0 1 0 0 2 3 0 0 0 2 0 0 16 0 1766.9414 Q7Z3T8 Q7Z3T8 934 949 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 2 0.0014259 61.265 By MS/MS 1 1033900 0 1033900 1557 1218 1669 3539 2894 2894 1428 1 NEVNGTSEDIKSEGDTQSN ESKESDTKNEVNGTSE SEGDTQSN________ K N E S N - 0 0 3 2 0 1 3 2 0 1 0 1 0 0 0 3 2 0 0 1 0 0 19 1 2022.8614 O95232 O95232 414 432 LUC7L3 Luc7-like protein 3 yes yes 2 0.0039842 62.658 By MS/MS 1 717090 0 717090 1558 813 1670 3540 2895 2895 960 1 NFDFEGSLSPVIAPK TDRLAWTRNFDFEGSL LSPVIAPKKARPSETG R N F P K K 1 0 1 1 0 0 1 1 0 1 1 1 0 2 2 2 0 0 0 1 0 0 15 0 1619.8195 Q9H1A4;H0Y564 Q9H1A4 680 694 ANAPC1 Anaphase-promoting complex subunit 1 yes no 2 0.01177 48.131 By MS/MS By MS/MS 1 1 5477200 3132600 2344600 1559 1391 1671 3541;3542 2896;2897 2897 1672 2 NFDTGLQEYK QQRQLYKRNFDTGLQE DTGLQEYKSLQSELDE R N F Y K S 0 0 1 1 0 1 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 10 0 1213.5615 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 435 444 OCLN Occludin yes no 2 0.013755 42.287 By matching By MS/MS 1 1 401020 121910 279110 1560 180 1672 3543;3544 2898 2898 2278 1 NFIGNSNHGSQSPR DAYFTEIRNFIGNSNH NHGSQSPRNVEERMNG R N F P R N 0 1 3 0 0 1 0 2 1 1 0 0 0 1 1 3 0 0 0 0 0 0 14 0 1513.7022 E7EUL6;A0A0C3SFZ7;E7EQ57;Q03112 E7EUL6 840 853 MECOM MDS1 and EVI1 complex locus protein EVI1 yes no 2 0.0015831 75.911 By matching By MS/MS 1 1 3223600 2121900 1101800 1561 141 1673 3545;3546 2899 2899 176 1 NFSDNQLQEGK KKSKENPRNFSDNQLQ DNQLQEGKNVIGLQMG R N F G K N 0 0 2 1 0 2 1 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1278.584 X6RJP6;P37802 X6RJP6 161 171 TAGLN2 Transgelin-2 yes no 2 0.0005544 90.793 By MS/MS 1 1281000 1281000 0 1562 953 1674 3547 2900 2900 1073 1 NFTKPQDGDVIAPLITPQKK FVQWCADRNFTKPQDG PLITPQKKEWNDSTSV R N F K K E 1 0 1 2 0 2 0 1 0 2 1 3 0 1 3 0 2 0 0 1 0 0 20 2 2209.2107 Q9Y3Z3 Q9Y3Z3 577 596 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 3 0.0011706 64.705 By MS/MS By matching 1 1 6794800 4010400 2784400 1563 1508 1675 3548;3549 2901 2901 2244 1 NFYESDDDQKEK DELEDNGKNFYESDDD SDDDQKEKTDKKKKPY K N F E K T 0 0 1 3 0 1 2 0 0 0 0 2 0 1 0 1 0 0 1 0 0 0 12 1 1516.6318 O00203 O00203 272 283 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.0051633 71.558 By MS/MS By matching 1 1 2400700 1379700 1021100 1564 750 1676 3550;3551 2902 2902 868 1 NGPSSSPFSSPASSR GISQLWKRNGPSSSPF FSSPASSRSQTPERPA R N G S R S 1 1 1 0 0 0 0 1 0 0 0 0 0 1 3 7 0 0 0 0 0 0 15 0 1463.6641 C9JFL1;A0A087WY75;A0A075B7F8;A6NF01;A8CG34;Q96HA1 C9JFL1 37 51 POM121C;POM121B;POM121 Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 yes no 2 0.0046292 54.393 By matching By MS/MS 1 1 2678900 1405100 1273900 1565 12 1677 3552;3553 2903 2903 7 1 NGSEADIDEGLYSR VPTNGMAKNGSEADID IDEGLYSRQLYVLGHE K N G S R Q 1 1 1 2 0 0 2 2 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1524.6692 Q5JRS1;Q5JRS3;Q5JRS2;Q5JRR9;Q5JRS0;P22314 Q5JRS1 58 71 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 4.9015E-08 107.09 By MS/MS By matching 3 3 16045000 8273800 7770800 1566 923 1678;1679 3554;3555;3556;3557;3558;3559 2904;2905;2906 2904 2403 2 NGSLTNHFSFEK QINGSVLKNGSLTNHF TNHFSFEKKKARVAVL K N G E K K 0 0 2 0 0 0 1 1 1 0 1 1 0 2 0 2 1 0 0 0 0 0 12 0 1379.647 A0A140TA71;P22102 A0A140TA71 58 69 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 2 0.0041721 69.229 By MS/MS By matching 1 1 2476700 1341000 1135700 1567 207 1680 3560;3561 2907 2907 257 1 NGSTAVAESVASPQK KPATGERKNGSTAVAE ESVASPQKTMSVLSCI K N G Q K T 3 0 1 0 0 1 1 1 0 0 0 1 0 0 1 3 1 0 0 2 0 0 15 0 1444.7158 Q12888;A6NNK5;C9JXV0 Q12888 1017 1031 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 7.1653E-05 90.706 By MS/MS By MS/MS 1 1 2469600 1394200 1075400 1568 1069 1681 3562;3563 2908;2909 2908 1224 2 NGVAAEVSPAKEENPR DYFGPPAKNGVAAEVS PAKEENPRRASKAVEE K N G P R R 3 1 2 0 0 0 3 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 16 1 1666.8275 Q9BW71 Q9BW71 118 133 HIRIP3 HIRA-interacting protein 3 yes yes 3 0.001163 65.022 By matching By MS/MS 1 1 5984500 3580300 2404200 1569 1372 1682 3564;3565 2910 2910 1633 1 NHLSPQQGGATPQVPSPCCR RRGLAHPKNHLSPQQG QVPSPCCRFDSPRGPP K N H C R F 1 1 1 0 2 3 0 2 1 0 1 0 0 0 4 2 1 0 0 1 0 0 20 0 2190.0059 A0A087X0R7;Q9H4L4 A0A087X0R7 96 115 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 0.0039323 50.505 By MS/MS By MS/MS 1 2 3690300 1796500 1893800 1570 73 1683;1684 3566;3567;3568 2911;2912 2912 85;86 2 NHSDSSTSESEVSSVSPLK NLQQNEEKNHSDSSTS VSSVSPLKNKHPDEDA K N H L K N 0 0 1 1 0 0 2 0 1 0 1 1 0 0 1 8 1 0 0 2 0 0 19 0 1975.8971 H7C559;C9IZ04;Q9NY27 H7C559 43 61 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 3 0.0024143 54.263 By matching By MS/MS 1 1 2669900 1074100 1595800 1571 307 1685 3569;3570 2913 2913 368 1 NHSGSRTPPVALNSSR SATPPATRNHSGSRTP PVALNSSRMSCFSRPS R N H S R M 1 2 2 0 0 0 0 1 1 0 1 0 0 0 2 4 1 0 0 1 0 0 16 1 1678.8499 Q9UQ35 Q9UQ35 2098 2113 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0058386 53.403 By MS/MS By matching 1 1 3813900 2335000 1478900 1572 1487 1686 3571;3572 2914 2914 1804;1805;2234 1 NIELICQENEGENDPVLQR DFYFGKLRNIELICQE ENDPVLQRIVDILYAT R N I Q R I 0 1 3 1 1 2 4 1 0 2 2 0 0 0 1 0 0 0 0 1 0 0 19 0 2269.0645 Q15691 Q15691 223 241 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 3 5.919E-12 73.76 By MS/MS By matching 1 1 2277500 1472900 804560 1573 1131 1687 3573;3574 2915 2915 1 NIGRDTPTSAGPNSFNK PEAKMRMKNIGRDTPT AGPNSFNKGKHGFSDN K N I N K G 1 1 3 1 0 0 0 2 0 1 0 1 0 1 2 2 2 0 0 0 0 0 17 1 1774.8598 Q8WW12 Q8WW12 134 150 PCNP PEST proteolytic signal-containing nuclear protein yes yes 3 0.01128 48.547 By MS/MS By matching 1 1 4358200 2465700 1892500 1574 1291 1688 3575;3576 2916 2916 2198 1 NIIHGSDSVESAEK DFCIQVGRNIIHGSDS DSVESAEKEIGLWFHP R N I E K E 1 0 1 1 0 0 2 1 1 2 0 1 0 0 0 3 0 0 0 1 0 0 14 0 1484.7107 P15531 P15531 115 128 NME1 Nucleoside diphosphate kinase A yes yes 2;3 1.6317E-12 108.71 By MS/MS By MS/MS 2 2 12210000 6542000 5668500 1575 901 1689 3577;3578;3579;3580 2917;2918;2919 2918 3 NIILEEGKEILVGDVGQTVDDPYATFVK FCLSEDKKNIILEEGK DPYATFVKMLPDKDCR K N I V K M 1 0 1 3 0 1 3 3 0 3 2 2 0 1 1 0 2 0 1 4 0 0 28 1 3061.5859 E9PP50;P23528;E9PS23;E9PQB7;G3V1A4;E9PK25;E9PLJ3 E9PP50 46 73 CFL1 Cofilin-1 yes no 3 4.1604E-06 51.963 By MS/MS By MS/MS 1 1 9976000 4538500 5437500 1576 471 1690 3581;3582 2920;2921 2921 2 NILSQIVDIDGIWEGTR VEMPGCKKNILSQIVD DGIWEGTRDFAACNHL K N I T R D 0 1 1 2 0 1 1 2 0 4 1 0 0 0 0 1 1 1 0 1 0 0 17 0 1928.0003 P16233 P16233 257 273 PNLIP Pancreatic triacylglycerol lipase yes yes 2;3 2.1354E-23 152 By MS/MS By MS/MS 2 2 59102000 37885000 21217000 1577 903 1691 3583;3584;3585;3586 2922;2923;2924 2923 3 NIPKYDLLYQDI VQSPIDPKNIPKYDLL YDLLYQDI________ K N I D I - 0 0 1 2 0 1 0 0 0 2 2 1 0 0 1 0 0 0 2 0 0 0 12 1 1493.7766 Q9NX01 Q9NX01 138 149 TXNL4B Thioredoxin-like protein 4B yes yes 2 0.014536 53.756 By MS/MS 1 360840 360840 0 1578 1436 1692 3587 2925 2925 2503 1 NIPTVNENLENYYLEVNQLEK DLSYNKLKNIPTVNEN LEVNQLEKFDIKSFCK K N I E K F 0 0 5 0 0 1 4 0 0 1 3 1 0 0 1 0 1 0 2 2 0 0 21 0 2535.2493 P51884 P51884 268 288 LUM Lumican yes yes 2;3 8.1061E-30 88.945 By MS/MS By MS/MS 2 2 84116000 52799000 31317000 1579 996 1693 3588;3589;3590;3591 2926;2927;2928 2927 3 NIQVVVR KKKEEKGKNIQVVVRC KNIQVVVRCRPFNLAE K N I V R C 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 7 0 826.50249 P52732 P52732 18 24 KIF11 Kinesin-like protein KIF11 yes yes 2 0.0095432 85.306 By MS/MS 1 0 0 0 1580 999 1694 3592 2929 2929 1 NIYVLQELDNPGAK DKNSVNFKNIYVLQEL ELDNPGAKRILELDQF K N I A K R 1 0 2 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 14 0 1572.8148 B1AHC9;P12956 B1AHC9 51 64 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.0091113 56.094 By MS/MS By MS/MS 1 1 837640 516160 321480 1581 249 1695 3593;3594 2930;2931 2931 2 NKPGPNIESGNEDDDASFK KGQKKNQKNKPGPNIE EDDDASFKIKTVAQKK K N K F K I 1 0 3 3 0 0 2 2 0 1 0 2 0 1 2 2 0 0 0 0 0 0 19 1 2032.8974 A0A087WUT6;O60841 A0A087WUT6 206 224 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0061952 49.662 By matching By MS/MS 1 1 96027000 55508000 40519000 1582 28 1696 3595;3596 2932 2932 29 1 NKPGPNIESGNEDDDASFKIK KGQKKNQKNKPGPNIE DDASFKIKTVAQKKAE K N K I K T 1 0 3 3 0 0 2 2 0 2 0 3 0 1 2 2 0 0 0 0 0 0 21 2 2274.0764 A0A087WUT6;O60841 A0A087WUT6 206 226 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0013159 75.524 By MS/MS By matching 1 1 48837000 30292000 18545000 1583 28 1697 3597;3598 2933 2933 29 1 NKPGVYTK WGYGCAQKNKPGVYTK NKPGVYTKVCNYVNWI K N K T K V 0 0 1 0 0 0 0 1 0 0 0 2 0 0 1 0 1 0 1 1 0 0 8 1 905.49707 A6XGL3;CON__P07477;E7EQ64;P07477;E9PRA0;J3KQC6;Q9BYE2;CON__P00761 CON__P00761 209 216 PRSS1;TMPRSS13 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2;Transmembrane protease serine 13 no no 2 0.012848 82.75 By MS/MS By MS/MS 1 1 16717000 9597400 7119500 + 1584 350;240 1698 3599;3600 2934;2935 2934 2 NKPRSPVVELSK VQRVPKMKNKPRSPVV SPVVELSKVPLVQRGS K N K S K V 0 1 1 0 0 0 1 0 0 0 1 2 0 0 2 2 0 0 0 2 0 0 12 2 1352.7776 P25098 P25098 666 677 ADRBK1 Beta-adrenergic receptor kinase 1 yes yes 3 0.010282 64.244 By matching By MS/MS 1 1 1863100 1174400 688700 1585 930 1699 3601;3602 2936 2936 1048 1 NKSNESVDIQDQEEK KKRSGKWKNKSNESVD DIQDQEEKVVKQECIK K N K E K V 0 0 2 2 0 2 3 0 0 1 0 2 0 0 0 2 0 0 0 1 0 0 15 1 1761.8017 Q5UIP0 Q5UIP0 1574 1588 RIF1 Telomere-associated protein RIF1 yes yes 2 0.0043773 56.599 By MS/MS By matching 1 1 2810800 1852200 958580 1586 1174 1700 3603;3604 2937 2937 1379 1 NLALDEAGQRSTM SEVAARKRNLALDEAG EAGQRSTM________ R N L T M - 2 1 1 1 0 1 1 1 0 0 2 0 1 0 0 1 1 0 0 0 0 0 13 1 1404.6667 Q53TN4 Q53TN4 274 286 CYBRD1 Cytochrome b reductase 1 yes yes 2 0.0088318 60.434 By MS/MS By matching 1 1 1148300 549020 599320 1587 1153 1701 3605;3606 2938 2938 1345;2172 1 NLASPNCVKPK PVVRPKIRNLASPNCV SPNCVKPKIFFDTDDD R N L P K I 1 0 2 0 1 0 0 0 0 0 1 2 0 0 2 1 0 0 0 1 0 0 11 1 1226.6441 Q8NG27 Q8NG27 262 272 PJA1 E3 ubiquitin-protein ligase Praja-1 yes yes 2 0.0022745 83.204 By matching By MS/MS 1 1 5931700 3235000 2696700 1588 1273 1702 3607;3608 2939 2939 1506 1 NLEAGVMKEMSNSKELTLR IVAKRTTKNLEAGVMK NSKELTLRIHSKNFHE K N L L R I 1 1 2 0 0 0 3 1 0 0 3 2 2 0 0 2 1 0 0 1 0 0 19 2 2149.0871 P35368 P35368 236 254 ADRA1B Alpha-1B adrenergic receptor yes yes 3 0.016266 44.391 By MS/MS 1 0 0 0 1589 948 1703 3609 2940 2940 164 1 NLEQILNGGESPK PNGSVETKNLEQILNG LNGGESPK________ K N L P K - 0 0 2 0 0 1 2 2 0 1 2 1 0 0 1 1 0 0 0 0 0 0 13 0 1397.7151 G3V3G7;G3V340;Q13033 G3V3G7 100 112 STRN3 Striatin-3 yes no 2 0.0017434 77.64 By MS/MS By MS/MS 1 2 1816200 617210 1199000 1590 555 1704 3610;3611;3612 2941;2942 2942 652 2 NLEWIAGGTWTPSALK SSFKEAVKNLEWIAGG TWTPSALKFAYDRLIK K N L L K F 2 0 1 0 0 0 1 2 0 1 2 1 0 0 1 1 2 2 0 0 0 0 16 0 1742.8992 P12110 P12110 693 708 COL6A2 Collagen alpha-2(VI) chain yes yes 2 3.7552E-19 117.2 By MS/MS By MS/MS 1 1 10678000 6057000 4621300 1591 893 1705 3613;3614 2943;2944 2943 2 NLGSGSPKPR EEVPAFFKNLGSGSPK GSGSPKPRQKFCGMFC K N L P R Q 0 1 1 0 0 0 0 2 0 0 1 1 0 0 2 2 0 0 0 0 0 0 10 1 1011.5461 A0A1C7CYX9 A0A1C7CYX9 22 31 yes yes 2 0.01941 61.11 By MS/MS By matching 1 1 3626600 2098200 1528400 1592 221 1706 3615;3616 2945 2945 1 NLGSINTELQDVQR YIDSRARRNLGSINTE TELQDVQRIMVANIEE R N L Q R I 0 1 2 1 0 2 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1585.806 A0A087X1A9;O75396 A0A087X1A9 9 22 SEC22B Vesicle-trafficking protein SEC22b yes no 2 0.00025172 88.561 By MS/MS 1 1678200 1678200 0 1593 75 1707 3617 2946 2946 87 1 NLHALILVNNK DGDFKNLKNLHALILV ALILVNNKISKVSPGA K N L N K I 1 0 3 0 0 0 0 0 1 1 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1247.735 P07585;F8VX58;F8VXZ8;F8VUF6;F8VWU0 P07585 106 116 DCN Decorin yes no 3 0.0030922 62.633 By MS/MS By matching 1 1 1130400 785530 344920 1594 865 1708 3618;3619 2947 2947 1 NLKGQEDAILSYEPVTR SDDYYGAKNLKGQEDA LSYEPVTRQEIHYARP K N L T R Q 1 1 1 1 0 1 2 1 0 1 2 1 0 0 1 1 1 0 1 1 0 0 17 1 1931.9953 Q92796 Q92796 605 621 DLG3 Disks large homolog 3 yes yes 3 0.016645 43.798 By MS/MS 1 0 0 0 1595 1312 1709 3620 2948 2948 2483 1 NLLEDDSDEEEDFFLR GSVKSERRNLLEDDSD EEEDFFLRGPSGPRFG R N L L R G 0 1 1 4 0 0 4 0 0 0 3 0 0 2 0 1 0 0 0 0 0 0 16 0 1984.8538 O75379 O75379 24 39 VAMP4 Vesicle-associated membrane protein 4 yes yes 2 0.0015155 71.241 By MS/MS 1 2026000 0 2026000 1596 797 1710 3621 2949 2949 934 1 NLLSVAYK AELSNEERNLLSVAYK NLLSVAYKNVVGGRRS R N L Y K N 1 0 1 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 8 0 906.51747 P27348;E9PG15;Q04917;P31946;P61981;P31947;Q4VY20;A0A0J9YWZ2;B4DJF2;Q4VY19;I3L3T1;K7EIT4;A0A0J9YWE8;A2IDB2;E7EX29;P63104;E5RGE1;E5RIR4;E9PD24;E7EVZ2;E7ESK7;P62258 P27348 42 49 YWHAQ;YWHAH;YWHAB;YWHAG;SFN;YWHAE;YWHAZ 14-3-3 protein theta;14-3-3 protein eta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein epsilon no no 2 0.017234 79.469 By MS/MS By matching 1 1 816810 583060 233750 1597 933;1022;432 1711 3622;3623 2950 2950 1 NLMQLNLAHNILR PDTFHGLKNLMQLNLA NLAHNILRKMPPRVPT K N L L R K 1 1 3 0 0 1 0 0 1 1 4 0 1 0 0 0 0 0 0 0 0 0 13 0 1548.8559 P51888 P51888 222 234 PRELP Prolargin yes yes 2 0.0065348 57.55 By MS/MS 1 590710 590710 0 1598 997 1712 3624 2951 2951 178 1 NLQASGLTTLGQALR ATFMSELKNLQASGLT TTLGQALRSSFDLLNL K N L L R S 2 1 1 0 0 2 0 2 0 0 4 0 0 0 0 1 2 0 0 0 0 0 15 0 1541.8526 Q5JSJ4 Q5JSJ4 79 93 DDX26B Protein DDX26B yes yes 3 0.0058392 43.813 By matching By MS/MS 1 1 796210 426940 369270 1599 1157 1713 3625;3626 2952 2952 1 NLQTVNVDEN YVPVTTFKNLQTVNVD QTVNVDEN________ K N L E N - 0 0 3 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1144.536 P62899 P62899 116 125 RPL31 60S ribosomal protein L31 yes yes 2 0.0022591 85.161 By MS/MS 1 2010000 2010000 0 1600 1026 1714 3627 2953 2953 1 NLQVALTSK SVLLDKIKNLQVALTS LQVALTSKQQSLETAM K N L S K Q 1 0 1 0 0 1 0 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 9 0 972.5604 E7ENL6;P12111 E7ENL6 1867 1875 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0083437 76.478 By MS/MS 1 599680 599680 0 1601 403 1715 3628 2954 2954 1 NLSKTELNKIASQLSK SSSSKDEKNLSKTELN KIASQLSKLVTAEISR K N L S K L 1 0 2 0 0 1 1 0 0 1 3 3 0 0 0 3 1 0 0 0 0 0 16 2 1772.9996 A0A087WUX3;J3QTJ6;Q5CZC0 A0A087WUX3 536 551 FSIP2 Fibrous sheath-interacting protein 2 yes no 2 0.0081292 40.577 By MS/MS By matching 1 1 820350 449860 370490 1602 31 1716 3629;3630 2955 2955 32;33;1893 1 NLSPGAVESDVR DISGLRKKNLSPGAVE GAVESDVRGITGVDLF K N L V R G 1 1 1 1 0 0 1 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 12 0 1242.6204 P53621 P53621 171 182 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0068641 60.157 By matching By MS/MS 1 1 2005000 1208500 796490 1603 1005 1717 3631;3632 2956 2956 1155 1 NLSPSFSR LRLMGGFKNLSPSFSR NLSPSFSRPASTIARP K N L S R P 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 3 0 0 0 0 0 0 8 0 906.45593 H3BNU8;Q1ED39 H3BNU8 64 71 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.010478 81.525 By MS/MS By matching 1 1 1722800 770400 952380 1604 644 1718 3633;3634 2957 2957 757 1 NLSSDEATNPISR GEREISLKNLSSDEAT EATNPISRVLNGNQQV K N L S R V 1 1 2 1 0 0 1 0 0 1 1 0 0 0 1 3 1 0 0 0 0 0 13 0 1402.6688 Q7Z417 Q7Z417 110 122 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0003321 95.401 By matching By MS/MS 1 1 2789800 1450500 1339300 1605 1219 1719 3635;3636 2958 2958 1429 1 NLVSPAYCTQESR SDFITENRNLVSPAYC AYCTQESREEIPGGEA R N L S R E 1 1 1 0 1 1 1 0 0 0 1 0 0 0 1 2 1 0 1 1 0 0 13 0 1523.7038 Q9NUQ3 Q9NUQ3 94 106 TXLNG Gamma-taxilin yes yes 2 0.010658 52.823 By matching By MS/MS 1 1 2208800 1228900 979920 1606 1429 1720 3637;3638 2959 2959 1736 1 NLVWNAGALHYSDEVEIIQGLTR DRYYRCDRNLVWNAGA EIIQGLTRMPGGRDAL R N L T R M 2 1 2 1 0 1 2 2 1 2 3 0 0 0 0 1 1 1 1 2 0 0 23 0 2597.3238 A0A087X0S5;P12109 A0A087X0S5 83 105 COL6A1 Collagen alpha-1(VI) chain yes no 3 6.154E-70 148.64 By MS/MS By MS/MS 1 1 87688000 52064000 35624000 1607 74 1721 3639;3640 2960;2961 2960 2 NLYAHIQK GHTEVPARNLYAHIQK NLYAHIQKLGQVPPGE R N L Q K L 1 0 1 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 985.53451 H0Y380;H0Y4H1;H0Y7Z9;H0Y6Z7;P10586 H0Y380 691 698 PTPRF Receptor-type tyrosine-protein phosphatase F yes no 2 0.0068992 111.65 By MS/MS By MS/MS 1 1 7296900 4793300 2503500 1608 580 1722 3641;3642 2962;2963 2963 2354 2 NLYSGDYYR IADFGMSRNLYSGDYY LYSGDYYRIQGRAVLP R N L Y R I 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 3 0 0 0 9 0 1149.5091 Q16832 Q16832 734 742 DDR2 Discoidin domain-containing receptor 2 yes yes 2 0.0017973 78.113 By matching By MS/MS 1 1 1373600 715690 657920 1609 1138 1723 3643;3644 2964 2964 2461;2462 1 NNEEWTVDSCTECHCQNSVTICK YHNGVQYRNNEEWTVD QNSVTICKKVSCPIMP R N N C K K 0 0 3 1 4 1 3 0 1 1 0 1 0 0 0 2 3 1 0 2 0 0 23 0 2870.1364 P07996 P07996 327 349 THBS1 Thrombospondin-1 yes yes 3 0.017841 26.627 By MS/MS 1 1419800 1419800 0 + 1610 870 1724 3645 2965 2965 1 NNLEVEDEEGSLFVGVDTIHVHK TYRVAVGKNNLEVEDE VDTIHVHKRWNALLLR K N N H K R 0 0 2 2 0 0 4 2 2 1 2 1 0 1 0 1 1 0 0 4 0 0 23 0 2579.2504 Q99895 Q99895 89 111 CTRC Chymotrypsin-C yes yes 4 0.00060239 52.769 By MS/MS By matching 1 1 1203800 779490 424270 1611 1358 1725 3646;3647 2966 2966 1 NNPSPPPDSDLER KSRGRGRKNNPSPPPD PPDSDLERVFVWDLDE K N N E R V 0 1 2 2 0 0 1 0 0 0 1 0 0 0 4 2 0 0 0 0 0 0 13 0 1436.6532 E7ESD5;E9PLN6;F2Z2Y1;O95677 E7ESD5 310 322 EYA4 Eyes absent homolog;Eyes absent homolog 4 yes no 2 0.0046876 61.65 By MS/MS By matching 1 1 2943800 1525200 1418600 1612 415 1726 3648;3649 2967 2967 474 1 NNSFTAPSTVGK TLQNHYYRNNSFTAPS TAPSTVGKRNLSPSQE R N N G K R 1 0 2 0 0 0 0 1 0 0 0 1 0 1 1 2 2 0 0 1 0 0 12 0 1221.599 O95453 O95453 555 566 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.0011053 83.204 By MS/MS By matching 1 1 6418400 3629600 2788700 1613 821 1727 3650;3651 2968 2968 971 1 NNTAAETEDDESDGEDRGGGTSGSLR LLGGGSPKNNTAAETE GGTSGSLRRSKRNSDS K N N L R R 2 2 2 4 0 0 4 5 0 0 1 0 0 0 0 3 3 0 0 0 0 0 26 1 2639.0815 Q6KC79 Q6KC79 2661 2686 NIPBL Nipped-B-like protein yes yes 3 0.0046906 48.597 By matching By MS/MS 1 1 4024800 2343500 1681400 1614 1189 1728 3652;3653 2969 2969 2181 1 NNYALNTTATYAEPYRPIQYR RSTLTYQRNNYALNTT PYRPIQYRVQECNYNR R N N Y R V 3 2 3 0 0 1 1 0 0 1 1 0 0 0 2 0 3 0 4 0 0 0 21 1 2518.2241 Q99569;A0A0D9SF60 Q99569 468 488 PKP4 Plakophilin-4 yes no 3 0.0016758 56.424 By MS/MS 1 0 0 0 1615 1356 1729 3654 2970 2970 2490;2491 1 NPDDITNEEYGEFYK KTKPIWTRNPDDITNE EEYGEFYKSLTNDWED R N P Y K S 0 0 2 2 0 0 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1832.7741 P07900 P07900 300 314 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.0022806 75.566 By MS/MS 1 1361200 0 1361200 1616 868 1730 3655 2971 2971 1 NPDDITQEEYGEFYK KTKPIWTRNPDDITQE EEYGEFYKSLTNDWED R N P Y K S 0 0 1 2 0 1 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1846.7897 P08238 P08238 292 306 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.0076766 54.7 By matching By MS/MS 1 1 3288300 2237100 1051200 1617 871 1731 3656;3657 2972 2972 1 NPEAALSPTFR DSGHLDLRNPEAALSP AALSPTFRSDSPVPTA R N P F R S 2 1 1 0 0 0 1 0 0 0 1 0 0 1 2 1 1 0 0 0 0 0 11 0 1201.6091 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 37 47 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes no 2 3.7645E-06 108.59 By MS/MS By MS/MS 1 1 7287200 4175200 3112000 1618 268 1732 3658;3659 2973;2974 2973 335 1 NPEDKSPQLSLSPRPASPK LAGSPTPKNPEDKSPQ SPRPASPKAQWPQSED K N P P K A 1 1 1 1 0 1 1 0 0 0 2 2 0 0 5 4 0 0 0 0 0 0 19 2 2047.0698 B9EGQ5;M0QXA7;O95785 B9EGQ5 182 200 WIZ Protein Wiz yes no 3 0.003046 55.02 By MS/MS By matching 1 1 8811300 5332700 3478600 1619 305 1733 3660;3661 2975 2975 363;364 1 NPSDSAVHSPFTK SLVQYDLKNPSDSAVH AVHSPFTKRQAFTPSS K N P T K R 1 0 1 1 0 0 0 0 1 0 0 1 0 1 2 3 1 0 0 1 0 0 13 0 1385.6575 Q14157;F8W726 Q14157 408 420 UBAP2L Ubiquitin-associated protein 2-like yes no 2 2.1755E-09 121.95 By matching By MS/MS 1 1 4593300 2408700 2184600 1620 1096 1734 3662;3663 2976 2976 1263 1 NPSDSAVHSPFTKR SLVQYDLKNPSDSAVH VHSPFTKRQAFTPSST K N P K R Q 1 1 1 1 0 0 0 0 1 0 0 1 0 1 2 3 1 0 0 1 0 0 14 1 1541.7587 Q14157;F8W726 Q14157 408 421 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.018813 52.019 By matching By MS/MS 1 1 7566000 4774200 2791800 1621 1096 1735 3664;3665 2977 2977 1263 1 NQGGYGGSSSSSSYGSGR GQYFAKPRNQGGYGGS SSSYGSGRRF______ R N Q G R R 0 1 1 0 0 1 0 6 0 0 0 0 0 0 0 7 0 0 2 0 0 0 18 0 1693.6928 F8W6I7;P09651;H0YH80 F8W6I7 288 305 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 2 0.016977 43.794 By MS/MS By matching 1 1 966490 655030 311470 1622 527 1736 3666;3667 2978 2978 1 NQILNLTTDNANILLQIDNAR YKTIDDLKNQILNLTT LLQIDNARLAADDFRL K N Q A R L 2 1 5 2 0 2 0 0 0 3 4 0 0 0 0 0 2 0 0 0 0 0 21 0 2366.2554 CON__P13645;P13645 CON__P13645 208 228 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 0.0010016 52.509 By MS/MS 2 4357700 0 4357700 + 1623 356 1737 3668;3669 2979;2980 2980 2 NQKGQEEVEMPSK NQKRNEKKNQKGQEEV EEVEMPSKEKQQPQKP K N Q S K E 0 0 1 0 0 2 3 1 0 0 0 2 1 0 1 1 0 0 0 1 0 0 13 1 1502.7035 Q14690 Q14690 1443 1455 PDCD11 Protein RRP5 homolog yes yes 2 0.018458 42.336 By MS/MS 1 0 0 0 1624 1107 1738 3670 2981 2981 203 1 NQKPSQVNGAPGSPTEPAGQK KSPKLQKKNQKPSQVN PTEPAGQKQHQKALPK K N Q Q K Q 2 0 2 0 0 3 1 3 0 0 0 2 0 0 4 2 1 0 0 1 0 0 21 1 2091.0345 I3L1L3;Q9BQG0 I3L1L3 1175 1195 MYBBP1A Myb-binding protein 1A yes no 3 0.0018978 58.024 By MS/MS By MS/MS 1 2 7065000 2711500 4353500 1625 690 1739;1740 3671;3672;3673 2982;2983 2982 816 2 NQSLGQSAPSLTAGLK ASNLVRMRNQSLGQSA PSLTAGLKELSLPRRG R N Q L K E 2 0 1 0 0 2 0 2 0 0 3 1 0 0 1 3 1 0 0 0 0 0 16 0 1570.8315 Q6P0Q8 Q6P0Q8 142 157 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 2 0.0015337 66.965 By matching By MS/MS 1 1 1003500 583640 419880 1626 1192 1741 3674;3675 2984 2984 1400 1 NQSPVLEPVGR ATYSALNRNQSPVLEP PVLEPVGRSTLAQRRG R N Q G R S 0 1 1 0 0 1 1 1 0 0 1 0 0 0 2 1 0 0 0 2 0 0 11 0 1194.6357 P51812 P51812 713 723 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 2 0.0049447 68.277 By MS/MS 1 1383400 0 1383400 1627 994 1742 3676 2985 2985 1140 1 NQVYHLPENRENSYNRSR EISAMRQRNQVYHLPE ENSYNRSRSSSISSID R N Q S R S 0 3 4 0 0 1 2 0 1 0 1 0 0 0 1 2 0 0 2 1 0 0 18 2 2275.0842 C9JPK3 C9JPK3 774 791 STXBP5L yes yes 2 0.016061 45.257 By MS/MS 1 0 0 0 1628 337 1743 3677 2986 2986 2313 1 NREQASGLCYNYQIR PDVGLTCRNREQASGL LCYNYQIRVQCCTPLP R N R I R V 1 2 2 0 1 2 1 1 0 1 1 0 0 0 0 1 0 0 2 0 0 0 15 1 1870.8744 P98088 P98088 1458 1472 MUC5AC Mucin-5AC yes yes 2 0.0037255 44.612 By matching By MS/MS 1 1 1526900 976250 550670 1629 1035 1744 3678;3679 2987 2987 35 1 NRQQDVRMTANR SRALDDVRNRQQDVRM DVRMTANRKVEQLQQE R N R N R K 1 3 2 1 0 2 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 12 2 1487.7375 Q14258 Q14258 225 236 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.012145 51.528 By MS/MS 1 0 0 0 1630 1099 1745 3680 2988 2988 202 1 NRSAEEGELAESK LKAKLRPRNRSAEEGE EGELAESKSSQKESAV R N R S K S 2 1 1 0 0 0 4 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 13 1 1418.6638 Q9C0C2 Q9C0C2 1664 1676 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 2.837E-09 113.52 By matching By MS/MS 1 1 4072300 2084600 1987700 1631 1385 1746 3681;3682 2989;2990 2990 1659 2 NSAMRTEPTR RRSSEPRKNSAMRTEP AMRTEPTRESNRKTDS K N S T R E 1 2 1 0 0 0 1 0 0 0 0 0 1 0 1 1 2 0 0 0 0 0 10 1 1161.5561 Q9NYZ3 Q9NYZ3 552 561 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.014904 48.948 By MS/MS 1 443440 0 443440 1632 1443 1747 3683 2991 2991 249 1 NSASATTPLSGNSSR NYTRPSSRNSASATTP PLSGNSSRRGSGDTSS R N S S R R 2 1 2 0 0 0 0 1 0 0 1 0 0 0 1 5 2 0 0 0 0 0 15 0 1448.6855 C9JSU1;Q9Y608 C9JSU1 79 93 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2 0.0014427 61.165 By MS/MS By matching 1 1 881020 480740 400280 1633 340 1748 3684;3685 2992 2992 401;402;403 1 NSATCHSEDSDLEID VLVLTSVRNSATCHSE EDSDLEID________ R N S I D - 1 0 1 3 1 0 2 0 1 1 1 0 0 0 0 3 1 0 0 0 0 0 15 0 1691.6581 Q13371 Q13371 287 301 PDCL Phosducin-like protein yes yes 2 0.010237 60.968 By matching By MS/MS 1 2 6967900 3822200 3145600 1634 1082 1749;1750 3686;3687;3688 2993;2994 2994 1248;1249 2 NSATFKSFEDR SRKLGDMRNSATFKSF TFKSFEDRVGTIKSKV R N S D R V 1 1 1 1 0 0 1 0 0 0 0 1 0 2 0 2 1 0 0 0 0 0 11 1 1300.6048 O43399 O43399 160 170 TPD52L2 Tumor protein D54 yes yes 2 1.6801E-05 103.14 By MS/MS By matching 1 1 28995000 16566000 12429000 1635 781 1751 3689;3690 2995 2995 908 1 NSDDAPWSPK KSRPKKKKNSDDAPWS DDAPWSPKARVTPTLP K N S P K A 1 0 1 2 0 0 0 0 0 0 0 1 0 0 2 2 0 1 0 0 0 0 10 0 1115.4884 H0Y3N9;Q9UPP1;H0Y589 H0Y3N9 741 750 PHF8 Histone lysine demethylase PHF8 yes no 2 0.0013775 84.352 By MS/MS By MS/MS 1 1 3251700 1800800 1450900 1636 582 1752 3691;3692 2996;2997 2997 697 2 NSDLLTSPDVGLLK LKPHLRAKNSDLLTSP SPDVGLLKLASPELER K N S L K L 0 0 1 2 0 0 0 1 0 0 4 1 0 0 1 2 1 0 0 1 0 0 14 0 1470.793 P05412 P05412 57 70 JUN Transcription factor AP-1 yes yes 2 0.011862 64.945 By MS/MS 1 3344300 3344300 0 1637 854 1753 3693 2998 2998 1 NSFLGSPR RARLNSIKNSFLGSPR NSFLGSPRFHRRKLQV K N S P R F 0 1 1 0 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 8 0 876.44537 Q8IWQ3;Q8TDC3;H0YES6;J3KNK0 Q8IWQ3 484 491 BRSK2;BRSK1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 yes no 2 0.01117 76.332 By matching By MS/MS 1 1 696870 347820 349050 1638 1242 1754 3694;3695 2999 2999 1466 1 NSITLTNLTPGTEYVVSIVALNGR EDRVPHSRNSITLTNL SIVALNGREESPLLIG R N S G R E 1 1 3 0 0 0 1 2 0 2 3 0 0 0 1 2 4 0 1 3 0 0 24 0 2531.3595 P02751;H0Y7Z1 P02751 1411 1434 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 2;3 5.6861E-62 136.92 By MS/MS By MS/MS 3 2 46985000 25527000 21459000 1639 843 1755 3696;3697;3698;3699;3700 3000;3001;3002;3003;3004 3000 8 5 NSLESISSIDR FAAGIGHRNSLESISS ESISSIDRELSPEGPG R N S D R E 0 1 1 1 0 0 1 0 0 2 1 0 0 0 0 4 0 0 0 0 0 0 11 0 1219.6044 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1138 1148 SCRIB Protein scribble homolog yes no 2 0.0019378 78.287 By MS/MS By MS/MS 1 1 2950100 1373400 1576600 1640 178 1756 3701;3702 3005;3006 3006 224 2 NSLESYAFNMK QRDKVSSKNSLESYAF ESYAFNMKATVEDEKL K N S M K A 1 0 2 0 0 0 1 0 0 0 1 1 1 1 0 2 0 0 1 0 0 0 11 0 1302.5914 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PM13;E9PS65 E9PKE3 521 531 HSPA8 Heat shock cognate 71 kDa protein yes no 2 0.0065166 60.398 By MS/MS 1 0 0 0 1641 458 1757 3703 3007 3007 79 1 NSNYCLPSYTAYK NMNNRNVKNSNYCLPS LPSYTAYKNYDYSEPG K N S Y K N 1 0 2 0 1 0 0 0 0 0 1 1 0 0 1 2 1 0 3 0 0 0 13 0 1579.6977 Q9Y4E8 Q9Y4E8 260 272 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 0.0070158 63.473 By matching By MS/MS 1 1 787380 490490 296900 1642 1510 1758 3704;3705 3008 3008 2516 1 NSPEDLGLSLTGDSCK KTSEIEPKNSPEDLGL SLTGDSCKLMLSTSEY K N S C K L 0 0 1 2 1 0 1 2 0 0 3 1 0 0 1 3 1 0 0 0 0 0 16 0 1691.7672 Q12888;A6NNK5;C9JXV0 Q12888 499 514 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0073014 51.147 By MS/MS By MS/MS 1 1 4251700 2092500 2159200 1643 1069 1759 3706;3707 3009;3010 3009 1225 2 NSPGSQVASNPR TPHALGSRNSPGSQVA SQVASNPRQAAYEMRM R N S P R Q 1 1 2 0 0 1 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 12 0 1212.5847 Q9H0D6 Q9H0D6 447 458 XRN2 5-3 exoribonuclease 2 yes yes 2 0.0041128 69.352 By MS/MS By MS/MS 2 1 5431600 3653600 1778000 1644 1390 1760 3708;3709;3710 3011;3012;3013;3014 3012 1670 4 NSPNNISGISNPPGTPR GDIDGLPKNSPNNISG SNPPGTPRDDGELGGN K N S P R D 0 1 4 0 0 0 0 2 0 2 0 0 0 0 4 3 1 0 0 0 0 0 17 0 1720.8493 Q9NW25;A0A087WVT6;Q9BWW4 Q9NW25 236 252 SSBP3 Single-stranded DNA-binding protein 3 yes no 2 3.9826E-06 94.673 By matching By MS/MS 1 1 5714700 3133700 2581000 1645 37 1761 3711;3712 3015 3015 1898 1 NSPTFKSFEEK TKKLEDVKNSPTFKSF TFKSFEEKVENLKGSP K N S E K V 0 0 1 0 0 0 2 0 0 0 0 2 0 2 1 2 1 0 0 0 0 0 11 1 1312.6299 H0YC42;P55327;E5RK35 H0YC42 170 180 TPD52 Tumor protein D52 yes no 2 9.4554E-06 105.95 By MS/MS 1 3094900 3094900 0 1646 610 1762 3713 3016 3016 732;2043 1 NSPVTKTPPR RKFLMECRNSPVTKTP PVTKTPPRDLPTIPGV R N S P R D 0 1 1 0 0 0 0 0 0 0 0 1 0 0 3 1 2 0 0 1 0 0 10 1 1095.6037 Q13541 Q13541 64 73 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 2 0.0028734 73.758 By MS/MS By matching 1 1 5550100 2512100 3038000 1647 1086 1763 3714;3715 3017 3017 1253;2150 1 NSQEDSEDSEDKDVK KNKRRSGKNSQEDSED DSEDKDVKTKKDDSHS K N S V K T 0 0 1 4 0 1 3 0 0 0 0 2 0 0 0 3 0 0 0 1 0 0 15 1 1723.702 Q9H1E3 Q9H1E3 53 67 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 1.9617E-81 144.15 By MS/MS By MS/MS 5 4 22218000 12796000 9421300 1648 1393 1764;1765 3716;3717;3718;3719;3720;3721;3722;3723;3724 3018;3019;3020;3021;3022;3023;3024;3025 3023 1678;1679 8 NSQPHSPTSSLTSGGSLPLLQSPPSTR ISLPLSARNSQPHSPT LQSPPSTRLSPARHPL R N S T R L 0 1 1 0 0 2 0 2 1 0 4 0 0 0 5 8 3 0 0 0 0 0 27 0 2732.3729 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 304 330 AMOT Angiomotin yes no 3 3.2544E-16 85.423 By MS/MS By matching 1 1 14583000 8587400 5995500 1649 1147 1766 3725;3726 3026 3026 1335;2169 1 NSQSFDSSLHGAGNGISR ISSPVTVRNSQSFDSS GAGNGISRIQSCIPSP R N S S R I 1 1 2 1 0 1 0 3 1 1 1 0 0 1 0 5 0 0 0 0 0 0 18 0 1832.8402 X6RGK9;B7Z326;A0A0C4DFN6;A0A0A0MSS3;Q8ND83 X6RGK9 165 182 SLAIN1 SLAIN motif-containing protein 1 yes no 2 0.0020913 64.224 By MS/MS By matching 1 1 1249200 661830 587370 1650 121 1767 3727;3728 3027 3027 149 1 NSSLLSFDNEDENE KNSQKQIKNSSLLSFD FDNEDENE________ K N S N E - 0 0 3 2 0 0 3 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 14 0 1611.6536 Q96AT1 Q96AT1 141 154 KIAA1143 Uncharacterized protein KIAA1143 yes yes 2 0.0031573 61.167 By MS/MS By MS/MS 1 1 4647500 2473900 2173700 1651 1320 1768 3729;3730 3028;3029 3029 1555 2 NSSPGEASLLEK VTEETDHRNSSPGEAS GEASLLEKETTRFFFF R N S E K E 1 0 1 0 0 0 2 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 12 0 1230.6092 Q76FK4 Q76FK4 1097 1108 NOL8 Nucleolar protein 8 yes yes 2 0.0014654 81.185 By matching By MS/MS 1 1 1643400 780610 862770 1652 1213 1769 3731;3732 3030 3030 1420 1 NSSQSGGKPGSSPITK SSGSSQSKNSSQSGGK PGSSPITKHGLSSGSS K N S T K H 0 0 1 0 0 1 0 3 0 1 0 2 0 0 2 5 1 0 0 0 0 0 16 1 1530.7638 Q15648 Q15648 1145 1160 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.0042251 56.851 By MS/MS By matching 1 1 1902800 1000300 902500 1653 1129 1770 3733;3734 3031 3031 1316;1317 0 NSSYFVEWIPNNVK QMLNVQNKNSSYFVEW EWIPNNVKTAVCDIPP K N S V K T 0 0 3 0 0 0 1 0 0 1 0 1 0 1 1 2 0 1 1 2 0 0 14 0 1695.8257 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A0B4J269;P68371;Q13509;P04350;K7ESM5;Q9BUF5 Q5JP53 319 332 TUBB;TUBB2B;TUBB2A;TUBB3;TUBB4B;TUBB4A;TUBB6 Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain;Tubulin beta-3 chain;Tubulin beta-4A chain;Tubulin beta-6 chain yes no 2 0.0062037 60.255 By MS/MS By matching 1 1 2235500 1581500 654070 1654 864 1771 3735;3736 3032 3032 1 NTEESSSPVRK VDTEPQKRNTEESSSP ESSSPVRKESSRGRHR R N T R K E 0 1 1 0 0 0 2 0 0 0 0 1 0 0 1 3 1 0 0 1 0 0 11 1 1232.5997 Q5T200 Q5T200 104 114 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 0.0014771 88.803 By MS/MS By MS/MS 1 1 9258400 5267600 3990800 1655 1167 1772 3737;3738 3033;3034 3034 1368;1369 2 NTFAEVTGLSPGVTYYFK GQRLPISRNTFAEVTG PGVTYYFKVFAVSHGR R N T F K V 1 0 1 0 0 0 1 2 0 0 1 1 0 2 1 1 3 0 2 2 0 0 18 0 1992.9833 P02751 P02751 959 976 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 0.00087135 78.486 By MS/MS By MS/MS 1 1 9082600 5382300 3700300 1656 843 1773 3739;3740 3035;3036 3036 2 NTLIIYLDK LDKAFSDRNTLIIYLD TLIIYLDKVSHSEDDC R N T D K V 0 0 1 1 0 0 0 0 0 2 2 1 0 0 0 0 1 0 1 0 0 0 9 0 1091.6227 P01024;M0QYC8;CON__Q2UVX4 P01024 1442 1450 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha chain;Complement C3c alpha chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha chain fragment 2 yes no 2 0.0050366 85.676 By MS/MS By MS/MS 1 1 874170 541740 332430 + 1657 838 1774 3741;3742 3037;3038 3038 2 NTPSQHSHSIQHSPER LSTVHSAKNTPSQHSH SIQHSPERSGSGSVGN K N T E R S 0 1 1 0 0 2 1 0 3 1 0 0 0 0 2 4 1 0 0 0 0 0 16 0 1840.8565 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 E9PQN2 254 269 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3;4 9.0067E-05 84.159 By MS/MS By MS/MS 4 3 433710000 243670000 190050000 1658 457 1775;1776 3743;3744;3745;3746;3747;3748;3749 3039;3040;3041;3042;3043;3044 3040 539;540;2000 6 NTSLPPLWSPEAER DKDITVSKNTSLPPLW LWSPEAERSHSLSQHT K N T E R S 1 1 1 0 0 0 2 0 0 0 2 0 0 0 3 2 1 1 0 0 0 0 14 0 1595.7944 P49790 P49790 201 214 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.0043713 57.804 By MS/MS By matching 1 1 1626100 959180 666960 1659 980 1777 3750;3751 3045 3045 1122 1 NVALLSQLYHSPAR AANPNQNKNVALLSQL QLYHSPARRFGGPVHH K N V A R R 2 1 1 0 0 1 0 0 1 0 3 0 0 0 1 2 0 0 1 1 0 0 14 0 1567.8471 Q15717 Q15717 192 205 ELAVL1 ELAV-like protein 1 yes yes 2 0.0026911 63.894 By MS/MS By MS/MS 1 1 1632300 1049800 582490 1660 1132 1778 3752;3753 3046;3047 3047 1320 2 NVLIVEDIIDTGK DLSTLTGKNVLIVEDI EDIIDTGKTMQTLLSL K N V G K T 0 0 1 2 0 0 1 1 0 3 1 1 0 0 0 0 1 0 0 2 0 0 13 0 1427.7872 P00492 P00492 129 141 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.0051381 69.65 By matching By MS/MS 1 1 2134300 1178800 955480 1661 831 1779 3754;3755 3048 3048 1 NVMTIITGYPTPGSKLSLR PKGVKLNKNVMTIITG PGSKLSLRNFIEFVFP K N V L R N 0 1 1 0 0 0 0 2 0 2 2 1 1 0 2 2 3 0 1 1 0 0 19 1 2047.1136 A6NKG5 A6NKG5 792 810 RTL1 Retrotransposon-like protein 1 yes yes 3 0.01673 44.005 By MS/MS 1 0 0 0 1662 233 1780 3756 3049 3049 39 1 NVQALEIELQSQLALK SEITELRRNVQALEIE LQSQLALKQSLEASLA R N V L K Q 2 0 1 0 0 3 2 0 0 1 4 1 0 0 0 1 0 0 0 1 0 0 16 0 1796.0044 CON__P13645;P13645 CON__P13645 371 386 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 1.629E-216 209.25 By MS/MS By matching 2 1 12489000 11554000 935910 + 1663 356 1781 3757;3758;3759 3050;3051 3051 2 NVQFVFDAVTDVIIK FTCATDTKNVQFVFDA AVTDVIIKNNLKDCGL K N V I K N 1 0 1 2 0 1 0 0 0 2 0 1 0 2 0 0 1 0 0 4 0 0 15 0 1706.9243 P63096;P08754;P04899 P63096 331 345 GNAI1;GNAI3;GNAI2 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 2 2.8544E-05 96.604 By MS/MS 1 1660600 1660600 0 1664 852 1782 3760 3052 3052 1 NVSSFPDDATSPLQENR DDQMLKRRNVSSFPDD TSPLQENRNNQGTVNW R N V N R N 1 1 2 2 0 1 1 0 0 0 1 0 0 1 2 3 1 0 0 1 0 0 17 0 1875.8599 J3QLL0;J3KS65;P52292 J3QLL0 52 68 KPNA2 Importin subunit alpha-1 yes no 2 8.6731E-246 208.85 By MS/MS By MS/MS 1 1 12008000 5756600 6250900 1665 710 1783 3761;3762 3053;3054;3055 3055 836 3 NVVFVIDISGSMR QNLTNMNKNVVFVIDI IDISGSMRGQKVKQTK K N V M R G 0 1 1 1 0 0 0 1 0 2 0 0 1 1 0 2 0 0 0 3 0 0 13 0 1435.7493 P19827 P19827 292 304 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes yes 2 0.019279 46.352 By MS/MS By matching 1 1 245680 157570 88108 1666 917 1784 3763;3764 3056 3056 160 0 NYGSYSTQASAAAATAELLK KLSPTEPKNYGSYSTQ AATAELLKKQEELNRK K N Y L K K 6 0 1 0 0 1 1 1 0 0 2 1 0 0 0 3 2 0 2 0 0 0 20 0 2015.98 O14828 O14828 82 101 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 0.0062246 67.102 By matching By MS/MS 1 1 4202600 2547200 1655400 1667 764 1785 3765;3766 3057 3057 2380 1 NYGYNPSPVKPEGLR SVVTESSRNYGYNPSP PVKPEGLRRPPSKTSM R N Y L R R 0 1 2 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 2 1 0 0 15 1 1689.8475 E9PRF4;Q15047 E9PRF4 1060 1074 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes no 2 0.002425 64.842 By MS/MS By MS/MS 1 1 4482200 2484600 1997600 1668 477 1786 3767;3768 3058;3059 3058 563 2 NYQQNYQNSESGEKNEGSESAPEGQAQQR PRRRGPPRNYQQNYQN PEGQAQQRRPYRRRRF R N Y Q R R 2 1 4 0 0 6 5 3 0 0 0 1 0 0 1 4 0 0 2 0 0 0 29 1 3256.3889 H0Y449;P67809;C9J5V9 H0Y449 207 235 YBX1 Nuclease-sensitive element-binding protein 1 yes no 3 2.6658E-06 58.812 By MS/MS By matching 1 1 6969700 4694800 2274900 1669 584 1787 3769;3770 3060 3060 1 NYSREQHGVAASCLEDLR LKPCLLRRNYSREQHG ASCLEDLRSKACDILA R N Y L R S 2 2 1 1 1 1 2 1 1 0 2 0 0 0 0 2 0 0 1 1 0 0 18 1 2103.9756 O00273;K7ERT1 O00273 26 43 DFFA DNA fragmentation factor subunit alpha yes no 3 0.0019695 60.307 By MS/MS 1 560100 0 560100 1670 754 1788 3771 3061 3061 874 1 NYSSPPPCHLSR DSNRIGRRNYSSPPPC PPPCHLSRQVPYDEIS R N Y S R Q 0 1 1 0 1 0 0 0 1 0 1 0 0 0 3 3 0 0 1 0 0 0 12 0 1413.6459 Q12986 Q12986 47 58 NFX1 Transcriptional repressor NF-X1 yes yes 2 0.010554 54.871 By MS/MS By matching 1 1 2382600 1225800 1156800 1671 1074 1789 3772;3773 3062 3062 1233 1 NYVGMQNCPK CAEVPEQKNYVGMQNC VGMQNCPKDGFPVPAN K N Y P K D 0 0 2 0 1 1 0 1 0 0 0 1 1 0 1 0 0 0 1 1 0 0 10 0 1209.5271 F8VUJ3;Q8N4A0 F8VUJ3 508 517 POC1B-GALNT4;GALNT4 Polypeptide N-acetylgalactosaminyltransferase;Polypeptide N-acetylgalactosaminyltransferase 4 yes no 2 0.016059 45.081 By MS/MS 1 0 0 0 1672 516 1790 3774 3063 3063 2344 1 NYVTPVNRNV GQTGMFPRNYVTPVNR VTPVNRNV________ R N Y N V - 0 1 3 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 3 0 0 10 1 1174.6095 P62993 P62993 208 217 GRB2 Growth factor receptor-bound protein 2 yes yes 2 0.0031315 73.248 By MS/MS 1 1371800 1371800 0 1673 1028 1791 3775 3064 3064 1 PAISDETWK P A W K 1 0 0 1 0 0 1 0 0 1 0 1 0 0 1 1 1 1 0 0 0 0 9 0 1045.508 REV__C9JDR3 yes no 2 0.0069746 70.912 By matching By MS/MS 1 2 1017900 456590 561310 + 1674 1527 1792 3776;3777;3778 3065 3065 1871 1 PAKSMDSLCSVPVEGK SVEKATIRPAKSMDSL CSVPVEGKETKGNFNR R P A G K E 1 0 0 1 1 0 1 1 0 0 1 2 1 0 2 3 0 0 0 2 0 0 16 1 1703.8222 Q2M1Z3 Q2M1Z3 343 358 ARHGAP31 Rho GTPase-activating protein 31 yes yes 3 0.019363 40.278 By MS/MS 1 0 0 0 1675 1141 1793 3779 3066 3066 208 1 PASPDRFAVSAEAENK ________________ VSAEAENKVREQQPHV R P A N K V 4 1 1 1 0 0 2 0 0 0 0 1 0 1 2 2 0 0 0 1 0 0 16 1 1687.8166 G3V331;O15037 G3V331 8 23 KHNYN Protein KHNYN yes no 3 0.0045627 53.038 By matching By MS/MS 1 1 795850 409640 386210 1676 554 1794 3780;3781 3067 3067 651 1 PATPGASSVEQLRK GPGTPEPRPATPGASS SSVEQLRKEGNELFKC R P A R K E 2 1 0 0 0 1 1 1 0 0 1 1 0 0 2 2 1 0 0 1 0 0 14 1 1439.7732 Q9H3U1 Q9H3U1 13 26 UNC45A Protein unc-45 homolog A yes yes 3 0.00096681 67.234 By MS/MS By MS/MS 1 1 3581400 2016700 1564600 1677 1397 1795 3782;3783 3068;3069 3068 2219 2 PCSEETPAISPSK ________________ TPAISPSKRARPAEVG M P C S K R 1 0 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 13 0 1401.6446 H0YNJ9 H0YNJ9 2 14 DUT yes yes 2 4.1654E-07 106.76 By MS/MS By MS/MS 1 1 10740000 5097300 5642300 1678 632 1796 3784;3785 3070;3071;3072;3073 3073 751;752 4 PCSEETPAISPSKR ________________ PAISPSKRARPAEVGG M P C K R A 1 1 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 14 1 1557.7457 H0YNJ9 H0YNJ9 2 15 DUT yes yes 2;3 0 223.14 By MS/MS By MS/MS 3 3 282770000 165320000 117450000 1679 632 1797 3786;3787;3788;3789;3790;3791 3074;3075;3076;3077;3078;3079;3080;3081;3082 3079 751;752 8 PEIDKAVVVSPSSLVK LRQSPECKPEIDKAVV VSPSSLVKNWYNEVGK K P E V K N 1 0 0 1 0 0 1 0 0 1 1 2 0 0 2 3 0 0 0 4 0 0 16 1 1666.9505 A0A087X124;A0A087WW72;A0A087WTB0;Q92698 A0A087X124 10 25 RAD54L DNA repair and recombination protein RAD54-like yes no 3 0.011794 45.084 By MS/MS By matching 1 1 656880 368890 288000 1680 14 1798 3792;3793 3083 3083 9;10 1 PESDGGSEISGYIIER SMTLCWSRPESDGGSE ISGYIIERREKNSLRW R P E E R R 0 1 0 1 0 0 3 3 0 3 0 0 0 0 1 3 0 0 1 0 0 0 16 0 1707.7952 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42 A0A0A0MRA3 19701 19716 TTN Titin yes no 2 0.01653 40.552 By MS/MS By matching 1 1 913260 521210 392050 1681 97 1799 3794;3795 3084 3084 2265 0 PFEVKDTEEEDFHVDQVTTVK FFKGKWERPFEVKDTE VDQVTTVKVPMMKRLG R P F V K V 0 0 0 3 0 1 4 0 1 0 0 2 0 2 1 0 3 0 0 4 0 0 21 1 2491.1755 P01009 P01009 221 241 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes yes 4 0.011839 35.159 By MS/MS 1 597140 597140 0 1682 836 1800 3796 3085 3085 1 PFGSVSSPK MAYNKAPRPFGSVSSP FGSVSSPKVTSIPSPS R P F P K V 0 0 0 0 0 0 0 1 0 0 0 1 0 1 2 3 0 0 0 1 0 0 9 0 904.46543 Q96HC4;A0A0D9SFR4 Q96HC4 131 139 PDLIM5 PDZ and LIM domain protein 5 yes no 2 0.0035751 82.831 By MS/MS By MS/MS 1 1 1209600 539980 669590 1683 1335 1801 3797;3798 3086;3087 3087 1575 2 PFSNSHNALK ________________ SNSHNALKLRFPAEDE M P F L K L 1 0 2 0 0 0 0 0 1 0 1 1 0 1 1 2 0 0 0 0 0 0 10 0 1113.5567 G3V4N7;P12277;G3V2I1 G3V4N7 2 11 CKB Creatine kinase B-type yes no 2 0.0075401 65.241 By matching By MS/MS 1 1 2195600 1250600 944980 1684 560 1802 3799;3800 3088 3088 659 1 PGFVIDIYTGLPVDIDECR ATLCGSQRPGFVIDIY PVDIDECREIPGVCEN R P G C R E 0 1 0 3 1 0 1 2 0 3 1 0 0 1 2 0 1 0 1 2 0 0 19 0 2178.0667 H0YND0;P35555 H0YND0 189 207 FBN1 Fibrillin-1 yes no 2 2.7168E-15 102.97 By matching By MS/MS 1 1 17037000 11435000 5602100 1685 631 1803 3801;3802 3089 3089 1 PGGPPNPPGPSPK LKRRTQSRPGGPPNPP NPPGPSPKALAKMMGG R P G P K A 0 0 1 0 0 0 0 3 0 0 0 1 0 0 7 1 0 0 0 0 0 0 13 0 1197.6142 B9EGQ5;M0QXA7;O95785 B9EGQ5 277 289 WIZ Protein Wiz yes no 2 0.0042563 63.292 By matching By MS/MS 1 1 932380 518720 413660 1686 305 1804 3803;3804 3090 3090 365 1 PGLVTVTSSQSTPAK SQKKKESRPGLVTVTS SSQSTPAKAPRAKCNP R P G A K A 1 0 0 0 0 1 0 1 0 0 1 1 0 0 2 3 3 0 0 2 0 0 15 0 1471.7882 F5GZ90;Q9NZJ0 F5GZ90 376 390 DTL Denticleless protein homolog yes no 2 0.0094552 58.63 By MS/MS By matching 1 1 881020 375920 505100 1687 491 1805 3805;3806 3091 3091 574;575;2003 1 PGPTPSGTNVGSSGRSPSK ________________ SSGRSPSKAVAARAAG M P G S K A 0 1 1 0 0 0 0 4 0 0 0 1 0 0 4 5 2 0 0 1 0 0 19 1 1768.8704 P60468 P60468 2 20 SEC61B Protein transport protein Sec61 subunit beta yes yes 3 0.0039858 53.444 By MS/MS By MS/MS 1 1 60492000 37182000 23310000 1688 1016 1806 3807;3808 3092;3093 3093 1162;1163;1164 2 PGTPSDHQSQEASQFER QTSSSSARPGTPSDHQ QEASQFERKDEPKTEQ R P G E R K 1 1 0 1 0 3 2 1 1 0 0 0 0 1 2 3 1 0 0 0 0 0 17 0 1899.8347 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1 I1E4Y6 402 418 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 3 0.0085159 61.962 By matching By MS/MS 1 1 1618500 685360 933100 1689 687 1807 3809;3810 3094 3094 2059 1 PGVTEATITGLEPGTEYTIYVIALK REVVPRPRPGVTEATI TIYVIALKNNQKSEPL R P G L K N 2 0 0 0 0 0 3 3 0 3 2 1 0 0 2 0 5 0 2 2 0 0 25 0 2635.3997 P02751;H0Y7Z1;H0Y4K8 P02751 1953 1977 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 9.3792E-14 87.729 By matching By MS/MS 1 1 4437900 1069500 3368400 1690 843 1808 3811;3812 3095 3095 1 PGWLSSPTLGR GGPLPLPRPGWLSSPT LSSPTLGRANRFLSTA R P G G R A 0 1 0 0 0 0 0 2 0 0 2 0 0 0 2 2 1 1 0 0 0 0 11 0 1169.6193 C9JS59;C9J266;Q5XPI4 C9JS59 670 680 RNF123 E3 ubiquitin-protein ligase RNF123 yes no 2 0.0050919 67.993 By MS/MS By MS/MS 1 1 1653500 1013900 639560 1691 318 1809 3813;3814 3096;3097 3097 382 2 PHGTIYLASKMR GTLQHLCRPHGTIYLA IYLASKMRKEHGTESF R P H M R K 1 1 0 0 0 0 0 1 1 1 1 1 1 0 1 1 1 0 1 0 0 0 12 1 1372.7285 Q96AZ1 Q96AZ1 172 183 METTL21B Protein-lysine methyltransferase METTL21B yes yes 2 0.0073297 46.158 By MS/MS By matching 1 1 833080 460830 372260 1692 1321 1810 3815;3816 3098 3098 229 2201;2485 1 PIFGGTVYHSPVSR ATANSSIRPIFGGTVY VYHSPVSRLPPSGSKP R P I S R L 0 1 0 0 0 0 0 2 1 1 0 0 0 1 2 2 1 0 1 2 0 0 14 0 1515.7834 G3V3N7;O43663;H0YNE4 G3V3N7 121 134 PRC1 Protein regulator of cytokinesis 1 yes no 3 0.0054199 51.147 By MS/MS 1 452410 0 452410 1693 557 1811 3817 3099 3099 656 1 PIITGYKSSLR TVLGIPQKPIITGYKS TGYKSSLREKDTATLN K P I L R E 0 1 0 0 0 0 0 1 0 2 1 1 0 0 1 2 1 0 1 0 0 0 11 1 1233.7081 A0A0C4DG09;Q8N126 A0A0C4DG09 133 143 CADM3 Cell adhesion molecule 3 yes no 2 0.0076375 58.433 By MS/MS By matching 1 1 2161600 1356000 805680 1694 146 1812 3818;3819 3100 3100 1929;2273 1 PLEGSSSEDSPPEGQAPPSHSPR QREDPQARPLEGSSSE APPSHSPRGTKRRASW R P L P R G 1 1 0 1 0 1 3 2 1 0 1 0 0 0 6 6 0 0 0 0 0 0 23 0 2344.0567 Q12789 Q12789 1836 1858 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.0011163 53.496 By MS/MS By matching 1 1 1350300 1102400 247960 1695 1065 1813 3820;3821 3101 3101 1218;1219 1 PLEMSSEAKATSQSSER VKDYISAKPLEMSSEA ATSQSSERKNEGSCGP K P L E R K 2 1 0 0 0 1 3 0 0 0 1 1 1 0 1 5 1 0 0 0 0 0 17 1 1836.8524 Q9NQZ5 Q9NQZ5 340 356 STARD7 StAR-related lipid transfer protein 7, mitochondrial yes yes 2 0.015703 45.433 By MS/MS 1 0 0 0 1696 1417 1814 3822 3102 3102 241 1 PLLKSAETEKEMATMK MKLFFKIKPLLKSAET EKEMATMKEEFQKTKD K P L M K E 2 0 0 0 0 0 3 0 0 0 2 3 2 0 1 1 2 0 0 0 0 0 16 2 1805.9267 P13535;P13533;P11055;Q9UKX2 P13535 841 856 MYH8;MYH6;MYH3;MYH2 Myosin-8;Myosin-6;Myosin-3;Myosin-2 yes no 2 0.0064276 40.589 By MS/MS 1 1706300 0 1706300 1697 886 1815 3823 3103 3103 150;151 2105;2106 1 PLLVDVDLQYPQDAVLALTQNHHK GFYSQVAKPLLVDVDL ALTQNHHKQYYEGSEI K P L H K Q 2 0 1 3 0 3 0 0 2 0 5 1 0 0 2 0 1 0 1 3 0 0 24 0 2726.4392 P19827;H7C0N0 P19827 478 501 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 4 8.1201E-09 82.635 By MS/MS By MS/MS 1 1 5579900 3952500 1627300 1698 917 1816 3824;3825 3104;3105;3106;3107 3107 4 PLTSPESLSR AAKAAGARPLTSPESL TSPESLSRDLEAPEVQ R P L S R D 0 1 0 0 0 0 1 0 0 0 2 0 0 0 2 3 1 0 0 0 0 0 10 0 1085.5717 A0A024RCR6;A0A0G2JK23;P46379 A0A024RCR6 1072 1081 BAT3;BAG6 Large proline-rich protein BAG6 yes no 2 0.0039465 69.721 By MS/MS By matching 1 1 1328700 706550 622170 1699 4 1817 3826;3827 3108 3108 1 1 PLYEGLGSGGEK ________________ GLGSGGEKTAVVIDLG M P L E K T 0 0 0 0 0 0 2 4 0 0 2 1 0 0 1 1 0 0 1 0 0 0 12 0 1205.5928 G3V4K6;G3V524;G3V2Q5;G3V5Y4;F6S9Y6;Q9NZ32 G3V4K6 2 13 ACTR10 Actin-related protein 10 yes no 2 9.0372E-06 104.42 By MS/MS By MS/MS 1 1 4458600 2514000 1944600 1700 507 1818 3828;3829 3109;3110;3111 3109 2341 3 PNTSYEFQVKPK FSTVENLKPNTSYEFQ YEFQVKPKNPLGEGPV K P N P K N 0 0 1 0 0 1 1 0 0 0 0 2 0 1 2 1 1 0 1 1 0 0 12 1 1436.73 H0Y897;D3YTG3;Q7Z7G0 H0Y897 959 970 ABI3BP Target of Nesh-SH3 yes no 3 0.01762 40.025 By MS/MS By matching 1 1 1044900 509710 535150 1701 362 1819 3830;3831 3112 3112 2323 0 PNVETIK DSDMDYERPNVETIKC RPNVETIKCVVVGDNA R P N I K C 0 0 1 0 0 0 1 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 7 0 799.44397 E5RI44;O94844;Q9BYZ6 E5RI44 32 38 RHOBTB2;RHOBTB1 Rho-related BTB domain-containing protein 1;Rho-related BTB domain-containing protein 2 yes no 2 0.0086227 83.377 By MS/MS 1 0 0 0 1702 390 1820 3832 3113 3113 1971 1 PQAVGSSNYASTSAGLK ERSVFMPRPQAVGSSN ASTSAGLKYPGSGADL R P Q L K Y 3 0 1 0 0 1 0 2 0 0 1 1 0 0 1 4 1 0 1 1 0 0 17 0 1636.8057 Q15018 Q15018 334 350 FAM175B BRISC complex subunit Abro1 yes yes 2 0.0019068 72.681 By matching By MS/MS 1 1 1935700 1100100 835660 1703 1113 1821 3833;3834 3114 3114 1300 1 PRPGVTEATITGLEPGTEYTIYVIALK PPREVVPRPRPGVTEA TIYVIALKNNQKSEPL R P R L K N 2 1 0 0 0 0 3 3 0 3 2 1 0 0 3 0 5 0 2 2 0 0 27 1 2888.5535 P02751;H0Y7Z1;H0Y4K8 P02751 1951 1977 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 1.7279E-87 142.41 By MS/MS By MS/MS 1 1 51964000 31537000 20427000 1704 843 1822 3835;3836 3115;3116 3116 2 PSAQLLSLLAMSPEK YTIPTVTKPSAQLLSL LLAMSPEKRKLAAQEG K P S E K R 2 0 0 0 0 1 1 0 0 0 4 1 1 0 2 3 0 0 0 0 0 0 15 0 1583.8593 B9A063;Q6PIF6 B9A063 424 438 MYO7B Unconventional myosin-VIIb yes no 2 0.01075 46.706 By MS/MS By matching 1 1 1013200 599320 413900 1705 304 1823 3837;3838 3117 3117 359;360 1 PSGQISDPSR STGTQVTRPSGQISDP GQISDPSRSYFVVVNH R P S S R S 0 1 0 1 0 1 0 1 0 1 0 0 0 0 2 3 0 0 0 0 0 0 10 0 1042.5043 Q14207 Q14207 160 169 NPAT Protein NPAT yes yes 2 0.012941 50.46 By MS/MS 1 0 0 0 1706 1097 1824 3839 3118 3118 1 PSSSPVIFAGGQDR VTIPYRPKPSSSPVIF IFAGGQDRYSTGSDSA K P S D R Y 1 1 0 1 0 1 0 2 0 1 0 0 0 1 2 3 0 0 0 1 0 0 14 0 1416.6997 H3BSS4;Q15366 H3BSS4 17 30 PCBP2 Poly(rC)-binding protein 2 yes no 2 3.6658E-12 109.35 By MS/MS By MS/MS 1 1 5213300 3195800 2017500 1707 661 1825 3840;3841 3119;3120 3119 778 2 PTSSPAKGPPQK LGNILQAKPTSSPAKG PAKGPPQKAGPVAVQV K P T Q K A 1 0 0 0 0 1 0 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 12 1 1193.6404 J3KQ96;E7ETY2;Q13428 J3KQ96 580 591 TCOF1 Treacle protein yes no 3 0.0014914 79.036 By MS/MS By MS/MS 1 2 5071000 2667000 2404000 1708 422 1826 3842;3843;3844 3121;3122 3121 485;486;1984 2 PTYTPPSIMPQK VPGAGLRRPTYTPPSI PPSIMPQKHWVYVKRG R P T Q K H 0 0 0 0 0 1 0 0 0 1 0 1 1 0 4 1 2 0 1 0 0 0 12 0 1358.6904 O15209 O15209 284 295 ZBTB22 Zinc finger and BTB domain-containing protein 22 yes yes 2 0.018117 42.718 By MS/MS 1 0 0 0 1709 771 1827 3845 3123 3123 122 2385 1 PVDIVFLLDGSER SVAQCTQRPVDIVFLL FLLDGSERLGEQNFHK R P V E R L 0 1 0 2 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 2 0 0 13 0 1458.7718 P12110 P12110 831 843 COL6A2 Collagen alpha-2(VI) chain yes yes 2 1.8239E-14 141.08 By MS/MS By MS/MS 1 1 16237000 9510300 6726400 1710 893 1828 3846;3847 3124;3125 3125 2 PVSSAASVYAGAGGSGSR QAPSYGARPVSSAASV GAGGSGSRISVSRSTS R P V S R I 4 1 0 0 0 0 0 4 0 0 0 0 0 0 1 5 0 0 1 2 0 0 18 0 1579.759 F8VZY9;P05783 F8VZY9 28 45 KRT18 Keratin, type I cytoskeletal 18 yes no 2;3 0.0015741 69.714 By MS/MS By MS/MS 2 2 5893000 4577800 1315200 1711 525 1829 3848;3849;3850;3851 3126;3127;3128 3127 3 PYQYPALTPEQK ________________ PALTPEQKKELSDIAH M P Y Q K K 1 0 0 0 0 2 1 0 0 0 1 1 0 0 3 0 1 0 2 0 0 0 12 0 1433.7191 H3BUH7;H3BQN4;J3KPS3;P04075;H3BMQ8;H3BR04 H3BUH7 2 13 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 2.1641E-05 73.985 By MS/MS 1 568990 0 568990 1712 654 1830 3852 3129 3129 0 QADSEMTGYVVTR ILDFGLARQADSEMTG MTGYVVTRWYRAPEVI R Q A T R W 1 1 0 1 0 1 1 1 0 0 0 0 1 0 0 1 2 0 1 2 0 0 13 0 1455.6664 B5MDL5;P53778 B5MDL5 87 99 MAPK12 Mitogen-activated protein kinase 12 yes no 2 2.7493E-37 158.56 By MS/MS By MS/MS 2 2 6054600 3011900 3042600 1713 282 1831;1832 3853;3854;3855;3856 3130;3131;3132;3133 3130 52 2302 4 QAESDMSK PRPWSYPRQAESDMSK QAESDMSKPPCYEEAV R Q A S K P 1 0 0 1 0 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 8 0 894.3753 D6RFJ4;Q8TB68 D6RFJ4 142 149 PRR7 Proline-rich protein 7 yes no 2 0.010141 62.823 By MS/MS 1 0 0 0 1714 378 1833 3857 3134 3134 62 436 1 QAFYYSYK TNSRICYKQAFYYSYK QAFYYSYKIYAGNNMH K Q A Y K I 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 3 0 0 0 8 0 1068.4916 V9GYX4 V9GYX4 386 393 CTCFL yes yes 2 0.0090653 60.478 By MS/MS 1 0 0 0 1715 1542 1834 3858 3135 3135 2521 1 QALDSEEEEEDVAAK GRPQALSRQALDSEEE EEEDVAAKETLLRLSS R Q A A K E 3 0 0 2 0 1 5 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 15 0 1661.7268 H7C3D5;Q8NC44 H7C3D5 76 90 FAM134A Protein FAM134A yes no 2 0.00091918 81.525 By matching By MS/MS 1 1 9778200 5535100 4243100 1716 679 1835 3859;3860 3136 3136 802 1 QALDSEEEEEDVAAKETLLR GRPQALSRQALDSEEE AAKETLLRLSSPLHFV R Q A L R L 3 1 0 2 0 1 6 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 20 1 2274.0863 H7C3D5;Q8NC44 H7C3D5 76 95 FAM134A Protein FAM134A yes no 3 0.01194 44.468 By MS/MS By matching 1 1 2286100 1412400 873710 1717 679 1836 3861;3862 3137 3137 802 1 QALSDLMIKPVQR SMRENKEKQALSDLMI LMIKPVQRIPRYELLV K Q A Q R I 1 1 0 1 0 2 0 0 0 1 2 1 1 0 1 1 0 0 0 1 0 0 13 1 1497.8337 Q96PE2 Q96PE2 1200 1212 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes yes 2 0.00045864 77.379 By MS/MS By MS/MS 1 1 11157000 3884500 7272800 1718 1344 1837 3863;3864 3138;3139 3138 41;42 231 2 QAQAQESEEEEESR LDLEARERQAQAQESE SEEEEESRSTRTLEQE R Q A S R S 2 1 0 0 0 3 6 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 14 0 1648.6813 H0YLQ7;Q9NVM6 H0YLQ7 106 119 DNAJC17 DnaJ homolog subfamily C member 17 yes no 2 0.0062311 54.951 By MS/MS By matching 1 1 1044000 813650 230330 1719 626 1838 3865;3866 3140 3140 748 1 QASLDGLQQLR GGGGRLLRQASLDGLQ LDGLQQLRDNMGSRRD R Q A L R D 1 1 0 1 0 3 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 11 0 1227.6571 Q3MII6 Q3MII6 504 514 TBC1D25 TBC1 domain family member 25 yes yes 2 0.0019806 77.597 By MS/MS By MS/MS 1 1 4360900 2220900 2140000 1720 1143 1839 3867;3868 3141;3142 3141 1331 2 QASLPVSGSVAGDFVK RARPPVQKQASLPVSG SVAGDFVKKATSCRGL K Q A V K K 2 0 0 1 0 1 0 2 0 0 1 1 0 1 1 3 0 0 0 3 0 0 16 0 1560.8148 E9PCD1;H0Y7J9;H0Y493;H0Y7R3;F8W9F9;H0Y7T5;Q9Y3S1 E9PCD1 187 202 WNK2 Serine/threonine-protein kinase WNK2 yes no 2 0.0015315 70.41 By MS/MS By matching 1 1 2964900 1737500 1227400 1721 436 1840 3869;3870 3143 3143 514 1 QASPTEVVER FNRTPGSRQASPTEVV SPTEVVERLGPNTNPS R Q A E R L 1 1 0 0 0 1 2 0 0 0 0 0 0 0 1 1 1 0 0 2 0 0 10 0 1114.5619 C9JW01;A0A0C4DG68;A0A0A0MR59;Q8TB72 C9JW01 180 189 PUM2 Pumilio homolog 2 yes no 2 9.3121E-05 121.21 By MS/MS By matching 1 1 5972000 3096600 2875400 1722 95 1841 3871;3872 3144 3144 118 1 QASTDAGTAGALTPQHVR PEPKSHSRQASTDAGT ALTPQHVRAHSSPASL R Q A V R A 4 1 0 1 0 2 0 2 1 0 1 0 0 0 1 1 3 0 0 1 0 0 18 0 1779.8864 P46937 P46937 107 124 YAP1 Transcriptional coactivator YAP1 yes yes 2 0.0082781 49.448 By MS/MS By MS/MS 1 1 4474600 2408400 2066300 1723 969 1842 3873;3874 3145;3146 3145 1103;2126 2 QATPGVPAQQSPSM GAMYTLPRQATPGVPA PAQQSPSM________ R Q A S M - 2 0 0 0 0 3 0 1 0 0 0 0 1 0 3 2 1 0 0 1 0 0 14 0 1397.6609 O60341 O60341 839 852 KDM1A Lysine-specific histone demethylase 1A yes yes 2 0.0044701 57.53 By MS/MS By MS/MS 1 1 2035900 814280 1221600 1724 788 1843 3875;3876 3147;3148 3147 922;923 2 QAYEPPPPPAYR HASRRPDRQAYEPPPP PPPPPAYRTGSLKPNP R Q A Y R T 2 1 0 0 0 1 1 0 0 0 0 0 0 0 5 0 0 0 2 0 0 0 12 0 1384.6776 A0A0D9SFS2;Q15654 A0A0D9SFS2 72 83 TRIP6 Thyroid receptor-interacting protein 6 yes no 2 0.010452 61.65 By MS/MS By matching 1 1 1989800 1133600 856220 1725 172 1844 3877;3878 3149 3149 2276 1 QDCCYDNRENPISSWNVK QRASQCLKQDCCYDNR PISSWNVKRARDIHLT K Q D V K R 0 1 3 2 2 1 1 0 0 1 0 1 0 0 1 2 0 1 1 1 0 0 18 1 2283.9637 Q15646 Q15646 332 349 OASL 2-5-oligoadenylate synthase-like protein yes yes 3 0.019941 40.693 By MS/MS 1 0 0 0 1726 1128 1845 3879 3150 3150 2460 1 QDPVTYISETDEEDDFMCKK SKPGKISRQDPVTYIS EDDFMCKKAASKSKEN R Q D K K A 0 0 0 4 1 1 3 0 0 1 0 2 1 1 1 1 2 0 1 1 0 0 20 1 2449.0301 P35251;D6RAD2 P35251 101 120 RFC1 Replication factor C subunit 1 yes no 3 0.0031005 44.831 By MS/MS By matching 1 1 3401500 2192800 1208800 1727 947 1846 3880;3881 3151 3151 163 1066 1 QDVYGPQPQVR EGYRAPSRQDVYGPQP YGPQPQVRVGGSSVDL R Q D V R V 0 1 0 1 0 3 0 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 11 0 1285.6415 C9JZR2;O60716;E9PRE2 C9JZR2 254 264 CTNND1 Catenin delta-1 yes no 2;3 1.225E-06 135.71 By MS/MS By MS/MS 2 2 37760000 19410000 18350000 1728 348 1847 3882;3883;3884;3885 3152;3153;3154 3154 2320 3 QEDGGVYSSSGLK ISDFGMSRQEDGGVYS VYSSSGLKQIPIKWTA R Q E L K Q 0 0 0 1 0 1 1 3 0 0 1 1 0 0 0 3 0 0 1 1 0 0 13 0 1325.6099 W0S4B9;P16591 W0S4B9 297 309 Pe1Fe10;FER Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Fer yes no 2 0.010073 58.511 By MS/MS By matching 1 1 2339900 1348700 991190 1729 904 1848 3886;3887 3155 3155 2400 1 QEKPAEKPAETPVATSPTATDSTSGDSSR PAPASAAKQEKPAEKP STSGDSSRSNLFEDAT K Q E S R S 4 1 0 2 0 1 3 1 0 0 0 2 0 0 4 5 5 0 0 1 0 0 29 2 2944.3898 H0Y579;P54727 H0Y579 15 43 RAD23B UV excision repair protein RAD23 homolog B yes no 4 0.0020586 44.336 By MS/MS By MS/MS 1 1 25059000 19711000 5347600 1730 591 1849 3888;3889 3156;3157 3157 710 2 QELAEPDEESDSSSAR Q E A R 2 1 0 2 0 1 4 0 0 0 1 0 0 0 1 4 0 0 0 0 0 0 16 0 1748.7337 REV__H0YH26 yes no 2 0.010421 48.405 By matching By MS/MS 1 1 29337000 15779000 13558000 + 1731 1530 1850 3890;3891 3158 3158 1873;1874;1875 1 QEMNESRRQIQ HEALRQAKQEMNESRR NESRRQIQ________ K Q E I Q - 0 2 1 0 0 3 2 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 11 2 1417.6732 F8W835 F8W835 197 207 PRPH yes yes 2 0.0092457 49.418 By MS/MS By matching 1 1 4373500 2221100 2152400 1732 530 1851 3892;3893 3159 3159 87 1 QEQINTEPLEDTVLSPTK EPEDKTVKQEQINTEP DTVLSPTKKRKRQKGT K Q E T K K 0 0 1 1 0 2 3 0 0 1 2 1 0 0 2 1 3 0 0 1 0 0 18 0 2041.0215 O15446 O15446 271 288 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 2 6.2504E-05 64.454 By matching By MS/MS 1 1 7249300 4143200 3106100 1733 774 1852 3894;3895 3160 3160 900 0 QERLSPEVAPPAHR LPAGVVVKQERLSPEV EVAPPAHRRPDHSGGS K Q E H R R 2 2 0 0 0 1 2 0 1 0 1 0 0 0 3 1 0 0 0 1 0 0 14 1 1585.8325 Q8TAD8 Q8TAD8 31 44 SNIP1 Smad nuclear-interacting protein 1 yes yes 3 0.00016994 93.909 By MS/MS By MS/MS 1 1 10048000 5875000 4173000 1734 1276 1853 3896;3897 3161;3162 3161 1508 2 QEVAPVQYNIVEQNK WKPLGQQKQEVAPVQY YNIVEQNKLNKDYRAN K Q E N K L 1 0 2 0 0 3 2 0 0 1 0 1 0 0 1 0 0 0 1 3 0 0 15 0 1757.8948 A0A087WZ85;A0A0A0MSX4;A0A087WTM1;Q9Y6N7 A0A087WZ85 981 995 ROBO1 Roundabout homolog 1 yes no 2 0.00088512 83.081 By MS/MS By MS/MS 1 1 3395300 1813200 1582100 1735 17 1854 3898;3899 3163;3164 3164 2256 2 QEYDESGPSIVHR FQQMWISKQEYDESGP SGPSIVHRKCF_____ K Q E H R K 0 1 0 1 0 1 2 1 1 1 0 0 0 0 1 2 0 0 1 1 0 0 13 0 1515.6954 P63261;P60709;Q6S8J3;P0CG39;P0CG38;A5A3E0;Q9BYX7 P63261 360 372 ACTG1;ACTB;POTEE;POTEJ;POTEI;POTEF;POTEKP Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member J;POTE ankyrin domain family member I;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed yes no 2;3 0.0008888 94.122 By MS/MS By matching 2 2 4073900 2834300 1239600 1736 1017 1855 3900;3901;3902;3903 3165;3166 3165 2 QFQEAIIVFQEEFK SATGESEKQFQEAIIV IVFQEEFKCCGLVNGA K Q F F K C 1 0 0 0 0 3 3 0 0 2 0 1 0 3 0 0 0 0 0 1 0 0 14 0 1754.8879 P19075 P19075 137 150 TSPAN8 Tetraspanin-8 yes yes 2;3 4.0382E-229 195.71 By MS/MS By MS/MS 1 2 10885000 6631700 4253300 1737 912 1856 3904;3905;3906 3167;3168;3169;3170 3170 4 QFSTASDHEQPGVSG KDQKKVERQFSTASDH HEQPGVSG________ R Q F S G - 1 0 0 1 0 2 1 2 1 0 0 0 0 1 1 3 1 0 0 1 0 0 15 0 1545.6696 G3V133;Q66K14 G3V133 395 409 TBC1D9B TBC1 domain family member 9B yes no 2 0.0071509 51.939 By MS/MS By matching 1 1 7512300 3918100 3594200 1738 547 1857 3907;3908 3171 3171 643 1 QGQGQSEPGEYEQRLSLQDR RTLIFRVRQGQGQSEP QRLSLQDRGATLALTQ R Q G D R G 0 2 0 1 0 5 3 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 20 1 2304.0731 P43121 P43121 78 97 MCAM Cell surface glycoprotein MUC18 yes yes 3 0.0068249 41.554 By matching By MS/MS 1 1 13668000 7588800 6078900 1739 963 1858 3909;3910 3172 3172 1085;1086 1 QGQSQAASSSSVTSPIK AQVEQQHKQGQSQAAS SSVTSPIKMKIPIANT K Q G I K M 2 0 0 0 0 3 0 1 0 1 0 1 0 0 1 6 1 0 0 1 0 0 17 0 1661.822 O60583 O60583 467 483 CCNT2 Cyclin-T2 yes yes 2 0.0076815 62.298 By MS/MS By matching 1 1 4635700 2606500 2029200 1740 790 1859 3911;3912 3173 3173 2077 1 QGSFRGFPALSQKNSPFK APLEQLVRQGSFRGFP SQKNSPFKRQLSLRLN R Q G F K R 1 1 1 0 0 2 0 2 0 0 1 2 0 3 2 3 0 0 0 0 0 0 18 2 1995.0326 A0A0C4DGH3;Q9Y6R0 A0A0C4DGH3 262 279 NUMBL Numb-like protein yes no 3 0.0050177 50.608 By matching By MS/MS 1 1 4188300 2147600 2040700 1741 157 1860 3913;3914 3174 3174 199;200 1 QGSPVAAGAPAK FGSRGQPRQGSPVAAG VAAGAPAKQQQVDIPL R Q G A K Q 4 0 0 0 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 12 0 1052.5615 Q9NZI8 Q9NZI8 179 190 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 1.099E-95 182.25 By MS/MS By MS/MS 1 1 74431000 43201000 31230000 1742 1445 1861 3915;3916 3175;3176;3177;3178;3179;3180;3181;3182;3183 3177 1751 9 QGSPVAAGAPAKQQQVDIPLR FGSRGQPRQGSPVAAG QQVDIPLRLLVPTQYV R Q G L R L 4 1 0 1 0 4 0 2 0 1 1 1 0 0 3 1 0 0 0 2 0 0 21 1 2130.1546 Q9NZI8 Q9NZI8 179 199 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 3 0.00058806 75.55 By MS/MS By MS/MS 1 1 66269000 28261000 38008000 1743 1445 1862 3917;3918 3184;3185 3185 1751 2 QHASSLEDTKSSLDCPAR RKGSSLERQHASSLED SSLDCPARTSLEWQRQ R Q H A R T 2 1 0 2 1 1 1 0 1 0 2 1 0 0 1 4 1 0 0 0 0 0 18 1 2000.9222 H7C4J7 H7C4J7 81 98 ROBO2 yes yes 2 0.0090474 51.774 By MS/MS 1 1498600 0 1498600 1744 684 1863 3919 3186 3186 805;806;2056 0 QHVVSVEEALLATGQWK LSLTVQGKQHVVSVEE LLATGQWKSITLFVQE K Q H W K S 2 0 0 0 0 2 2 1 1 0 2 1 0 0 0 1 1 1 0 3 0 0 17 0 1893.9949 P07996;CON__Q28194 P07996 138 154 THBS1 Thrombospondin-1 yes no 3 0.0057467 44.598 By MS/MS 1 327630 327630 0 + 1745 870 1864 3920 3187;3188;3189 3188 3 QILIACSPVSSVR ILRVTRRRQILIACSP CSPVSSVRKKPKVTPT R Q I V R K 1 1 0 0 1 1 0 0 0 2 1 0 0 0 1 3 0 0 0 2 0 0 13 0 1428.7759 J3KP30;Q5QJE6;E9PRB3 J3KP30 111 123 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 0.00045047 84.173 By MS/MS By MS/MS 1 1 11631000 7304300 4326300 1746 701 1865 3921;3922 3190;3191 3190 828 2 QIQTSPVPVR DKGGKDKKQIQTSPVP QTSPVPVRKNSRDEEK K Q I V R K 0 1 0 0 0 2 0 0 0 1 0 0 0 0 2 1 1 0 0 2 0 0 10 0 1123.635 Q9NRM7 Q9NRM7 572 581 LATS2 Serine/threonine-protein kinase LATS2 yes yes 2 0.0084597 64.42 By MS/MS By matching 1 1 868020 481400 386620 1747 1420 1866 3923;3924 3192 3192 1720 1 QIVGTPVNSEDSDTR KIVPGNEKQIVGTPVN NSEDSDTRQTSHLQAR K Q I T R Q 0 1 1 2 0 1 1 1 0 1 0 0 0 0 1 2 2 0 0 2 0 0 15 0 1616.7642 J3KP30;Q5QJE6 J3KP30 228 242 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 0.0062396 77.222 By matching By MS/MS 1 1 2374300 1271600 1102700 1748 701 1867 3925;3926 3193 3193 2062 1 QKFNDSEGDDTEETEDYR FSDKESGKQKFNDSEG TEETEDYRQFRKSVLA K Q K Y R Q 0 1 1 4 0 1 4 1 0 0 0 1 0 1 0 1 2 0 1 0 0 0 18 1 2176.8669 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 390 407 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0037073 54.368 By MS/MS By matching 1 1 45881000 26208000 19673000 1749 457 1868 3927;3928 3194 3194 537;1999 1 QKKAHLMEIQVNGGTVAEK QMRLLPLRQKKAHLME NGGTVAEKLDWARERL R Q K E K L 2 0 1 0 0 2 2 2 1 1 1 3 1 0 0 0 1 0 0 2 0 0 19 2 2080.1099 H7C3M2;B5MCW2;H7C422;G5E9G0;P39023 H7C3M2 207 225 RPL3 60S ribosomal protein L3 yes no 2 5.8446E-09 91.789 By MS/MS By MS/MS 2 2 1854800000 926060000 928690000 1750 279 1869;1870 3929;3930;3931;3932 3195;3196;3197 3195 20;21 1954 2 QKSDAEEDGGTVSQEEEDR GEEKLEEKQKSDAEED VSQEEEDRKPKAEEDE K Q K D R K 1 1 0 3 0 2 5 2 0 0 0 1 0 0 0 2 1 0 0 1 0 0 19 1 2107.8778 P27824 P27824 552 570 CANX Calnexin yes yes 3 0.0096586 46.273 By MS/MS By matching 1 1 5630900 2701500 2929400 1751 934 1871 3933;3934 3198 3198 1052 1 QKSDHGAYSQSPAIK GRKIRVLRQKSDHGAY YSQSPAIKKQLDRHLP R Q K I K K 2 0 0 1 0 2 0 1 1 1 0 2 0 0 1 3 0 0 1 0 0 0 15 1 1615.7954 Q9Y4B6 Q9Y4B6 977 991 VPRBP Protein VPRBP yes yes 3 0.010318 47.506 By MS/MS By matching 1 1 930200 605770 324430 1752 1509 1872 3935;3936 3199 3199 1854 1 QKSPAQSDSTTQR GSESGRGRQKSPAQSD QSDSTTQRRTVGKKQP R Q K Q R R 1 1 0 1 0 3 0 0 0 0 0 1 0 0 1 3 2 0 0 0 0 0 13 1 1432.6906 Q9UHB7 Q9UHB7 547 559 AFF4 AF4/FMR2 family member 4 yes yes 2 0.014122 55.04 By matching By MS/MS 1 1 1005400 421100 584310 1753 1457 1873 3937;3938 3200 3200 1 QKSYTLVVAK FIPPWLKKQKSYTLVV SYTLVVAKDGGDKKEP K Q K A K D 1 0 0 0 0 1 0 0 0 0 1 2 0 0 0 1 1 0 1 2 0 0 10 1 1135.6601 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 85 94 EPB41L2 Band 4.1-like protein 2 yes no 2 2.2176E-05 107.11 By MS/MS By MS/MS 1 1 16339000 9283000 7055700 1754 783 1874 3939;3940 3201;3202 3201 913;2389 2 QKYLDSFTPCWLNLK KAILTLVKQKYLDSFT TPCWLNLKNTPVGRGI K Q K L K N 0 0 1 1 1 1 0 0 0 0 3 2 0 1 1 1 1 1 1 0 0 0 15 1 1911.9553 Q9P2K2 Q9P2K2 655 669 TXNDC16 Thioredoxin domain-containing protein 16 yes yes 3 0.0056792 45.347 By MS/MS 1 5635600 0 5635600 1755 1450 1875 3941 3203 3203 2227 1 QLEEPGAGTPSPVR SGSGMPSRQLEEPGAG AGTPSPVRLHALAGFQ R Q L V R L 1 1 0 0 0 1 2 2 0 0 1 0 0 0 3 1 1 0 0 1 0 0 14 0 1436.726 Q63ZY6;Q96P11 Q63ZY6 133 146 NSUN5P2;NSUN5 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 2 4.3878E-07 105.14 By MS/MS By MS/MS 1 1 2459500 1265700 1193800 1756 1181 1876 3942;3943 3204;3205 3205 2180 2 QLHLEGASLELSDDDTESK SSSRSGRRQLHLEGAS SDDDTESKTSDVNETQ R Q L S K T 1 0 0 3 0 1 3 1 1 0 4 1 0 0 0 3 1 0 0 0 0 0 19 0 2085.9702 P35580 P35580 1945 1963 MYH10 Myosin-10 yes yes 3 0.0063114 46.46 By MS/MS By matching 1 1 9971600 4334800 5636800 1757 951 1877 3944;3945 3206 3206 1068 1 QLIEMDK VELNDSAKQLIEMDKP KQLIEMDKPCPAAASS K Q L D K P 0 0 0 1 0 1 1 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 7 0 875.44225 Q8TEJ3 Q8TEJ3 322 328 SH3RF3 SH3 domain-containing RING finger protein 3 yes yes 2 0.020156 78.616 By MS/MS By matching 2 1 40422000 30402000 10019000 1758 1284 1878 3946;3947;3948 3207 3207 1 QLIVGVNK LAYTLGVKQLIVGVNK QLIVGVNKMDSTEPPY K Q L N K M 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 869.53345 Q5VTE0;P68104;A0A087WV01;Q05639 Q5VTE0 147 154 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 yes no 2 0.019386 76.847 By matching By MS/MS 1 1 1599200 1217500 381720 1759 1029 1879 3949;3950 3208 3208 1 QLLDSDEEQEEDEGR LKAAPKKRQLLDSDEE EQEEDEGRNRAPELGA R Q L G R N 0 1 0 3 0 2 5 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 15 0 1790.7442 Q9UNS1 Q9UNS1 1169 1183 TIMELESS Protein timeless homolog yes yes 2 0.019691 43.791 By matching By MS/MS 1 1 17100000 8406100 8694000 1760 1480 1880 3951;3952 3209 3209 1 QLLLTADDR EENRRFYRQLLLTADD LLLTADDRVNPCIGGV R Q L D R V 1 1 0 2 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1043.5611 H3BUH7;H3BQN4;J3KPS3;P04075;H3BMQ8;H3BR04;H3BPS8;H3BU78 H3BUH7 61 69 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.015961 68.371 By matching By MS/MS 1 1 1521200 847220 673970 1761 654 1881 3953;3954 3210 3210 1 QLLTLSSELSQAR EKNERVQRQLLTLSSE SSELSQARDENKRTHN R Q L A R D 1 1 0 0 0 2 1 0 0 0 4 0 0 0 0 3 1 0 0 0 0 0 13 0 1444.7886 E7EQR4;P15311 E7EQR4 530 542 EZR Ezrin yes no 2 0.0025042 71.279 By MS/MS By matching 1 1 1948800 981510 967270 1762 410 1882 3955;3956 3211 3211 462 1 QLQALSSELAQAR QKNERVKKQLQALSSE SSELAQARDETKKTQN K Q L A R D 3 1 0 0 0 3 1 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 13 0 1413.7576 P35241 P35241 527 539 RDX Radixin yes yes 2 0.01066 52.821 By MS/MS 1 759720 759720 0 1763 946 1883 3957 3212 3212 1064 1 QLQASPGLGAGATR RGGDSAVRQLQASPGL GLGAGATRSGVGTGPP R Q L T R S 3 1 0 0 0 2 0 3 0 0 2 0 0 0 1 1 1 0 0 0 0 0 14 0 1325.7052 Q92630 Q92630 26 39 DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 2 yes yes 2 0.012346 49.466 By MS/MS By matching 1 1 1334100 999240 334860 1764 1306 1884 3958;3959 3213 3213 1 QLQGIQIQEAETR DMCSNYEKQLQGIQIQ QIQEAETRDQVKKLQL K Q L T R D 1 1 0 0 0 4 2 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 13 0 1512.7896 Q15276 Q15276 542 554 RABEP1 Rab GTPase-binding effector protein 1 yes yes 3 0.0083133 42.149 By matching By MS/MS 1 1 1277000 633250 643800 1765 1121 1885 3960;3961 3214 3214 2160 1 QLSALAEQQRR THLQGCTRQLSALAEQ ALAEQQRRILQQDWSD R Q L R R I 2 2 0 0 0 3 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 11 1 1298.7055 K7EKI0;Q92817 K7EKI0 238 248 EVPL Envoplakin yes no 2 0.00023374 77.674 By matching By MS/MS 1 1 793050 582340 210710 1766 728 1886 3962;3963 3215 3215 30;31 850 0 QLSESESSLEMDDER ERREALCRQLSESESS SLEMDDERYFNEMSAQ R Q L E R Y 0 1 0 2 0 1 4 0 0 0 2 0 1 0 0 4 0 0 0 0 0 0 15 0 1753.7312 Q16204 Q16204 321 335 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 0.0014802 65.467 By MS/MS By MS/MS 2 2 8182900 4581300 3601600 1767 1135 1887;1888 3964;3965;3966;3967 3216;3217;3218 3218 206 1325 3 QLSLEGSGLGVEDLK STKYDVFRQLSLEGSG GLGVEDLKDNTPSGKS R Q L L K D 0 0 0 1 0 1 2 3 0 0 4 1 0 0 0 2 0 0 0 1 0 0 15 0 1543.8094 Q9UMZ2 Q9UMZ2 750 764 SYNRG Synergin gamma yes yes 2 6.3573E-13 109.39 By MS/MS By MS/MS 1 1 2397500 1165100 1232400 1768 1478 1889 3968;3969 3219;3220 3220 1789 2 QLSLPLTQSK GMRFKHQRQLSLPLTQ SLPLTQSKSSPKRGFF R Q L S K S 0 0 0 0 0 2 0 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 10 0 1113.6394 Q9C0I1 Q9C0I1 562 571 MTMR12 Myotubularin-related protein 12 yes yes 2 0.0041227 69.261 By MS/MS By matching 1 1 1966700 1035600 931070 1769 1386 1890 3970;3971 3221 3221 1664 1 QLSMSSADSADAKR SWDPRRQRQLSMSSAD ADSADAKRTREEGKDW R Q L K R T 3 1 0 2 0 1 0 0 0 0 1 1 1 0 0 4 0 0 0 0 0 0 14 1 1465.6831 Q5JSZ5 Q5JSZ5 414 427 PRRC2B Protein PRRC2B yes yes 2 0.015855 53.211 By matching By MS/MS 1 1 1835800 865210 970610 1770 1158 1891 3972;3973 3222 3222 1 QLSVIPPMMFDAEQR ENNEKQMRQLSVIPPM MMFDAEQRRVKFINMN R Q L Q R R 1 1 0 1 0 2 1 0 0 1 1 0 2 1 2 1 0 0 0 1 0 0 15 0 1760.859 A0A088AWL3;O75376;E7EVU5;E7EW50;J3KS51 A0A088AWL3 290 304 NCOR1 Nuclear receptor corepressor 1 yes no 3 0.0062113 41.912 By matching By MS/MS 1 1 607700 262300 345400 1771 86 1892 3974;3975 3223 3223 13;14 106 1 QNCELFEQLGEYK EEPQNLIKQNCELFEQ FEQLGEYKFQNALLVR K Q N Y K F 0 0 1 0 1 2 3 1 0 0 2 1 0 1 0 0 0 0 1 0 0 0 13 0 1656.7454 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 414 426 ALB Serum albumin yes no 2 0.0068557 65.241 By MS/MS By matching 1 1 1817900 936810 881050 + 1772 152 1893 3976;3977 3224 3224 1 QNDPVSKLLNNLDSK Q N S K 0 0 3 2 0 1 0 0 0 0 3 2 0 0 1 2 0 0 0 1 0 0 15 1 1683.8792 REV__Q6Q759 yes yes 3 0.0066416 51.009 By MS/MS By matching 2 1 48903000 31882000 17022000 + 1773 1538 1894 3978;3979;3980 3225 3225 1882 1 QNGSNDSDRYSDNEEDSKIELK SSSAENTRQNGSNDSD EDSKIELKLEKREPLK R Q N L K L 0 1 3 4 0 1 3 1 0 1 1 2 0 0 0 4 0 0 1 0 0 0 22 2 2542.1055 G5E972;P42167;H0YJH7 G5E972 174 195 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3;4 3.8087E-39 125.51 By MS/MS By MS/MS 7 7 304230000 207320000 96907000 1774 572 1895;1896;1897 3981;3982;3983;3984;3985;3986;3987;3988;3989;3990;3991;3992;3993;3994 3226;3227;3228;3229;3230;3231;3232;3233;3234;3235 3232 3;4;27 676;677;678;2352 10 QNNFSLAMK KMIDSARKQNNFSLAM NNFSLAMKLLKELHKE K Q N M K L 1 0 2 0 0 1 0 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 9 0 1051.5121 P78527 P78527 3249 3257 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.014021 50.791 By MS/MS 1 0 0 0 1775 1033 1898 3995 3236 3236 188 1 QNSDPTSENPPLPTR SHRVEMPRQNSDPTSE ENPPLPTRIEKFDRSS R Q N T R I 0 1 2 1 0 1 1 0 0 0 1 0 0 0 4 2 2 0 0 0 0 0 15 0 1651.7802 Q9UKE5 Q9UKE5 638 652 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.0043651 54.65 By MS/MS By MS/MS 1 1 8279400 4581400 3698000 1776 1464 1899 3996;3997 3237;3238 3237 1771 2 QNSIENDIEEK SPETKCPKQNSIENDI IENDIEEKVSDLASRG K Q N E K V 0 0 2 1 0 1 3 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 11 0 1317.6048 F5GXF5;E7ETD6;Q12830 F5GXF5 1245 1255 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 1.8218E-05 123.26 By MS/MS By matching 1 1 3015500 1531100 1484400 1777 420 1900 3998;3999 3239 3239 478 1 QNSLGCIGECGVDSGFEAPR CKPLSTFRQNSLGCIG DSGFEAPRLGEQGGDF R Q N P R L 1 1 1 1 2 1 2 4 0 1 1 0 0 1 1 2 0 0 0 1 0 0 20 0 2151.9314 A1L020 A1L020 336 355 MEX3A RNA-binding protein MEX3A yes yes 2 0.0060157 50.493 By MS/MS By matching 1 1 2063500 1321500 741970 1778 222 1901 4000;4001 3240 3240 274 1 QNSPVTSPGSSPLAQRRK NVRKCTDRQNSPVTSP SPLAQRRKPQPDPLQI R Q N R K P 1 2 1 0 0 2 0 1 0 0 1 1 0 0 3 4 1 0 0 1 0 0 18 2 1909.013 B5MC15;Q13191 B5MC15 474 491 CBLB E3 ubiquitin-protein ligase CBL-B yes no 3 0.0052539 44.734 By MS/MS 1 1575300 1575300 0 1779 276 1902 4002 3241 3241 341;1953 1 QNSSSSDSGGSIVR KVPANITRQNSSSSDS DSGGSIVRDSQRHKQL R Q N V R D 0 1 1 1 0 1 0 2 0 1 0 0 0 0 0 6 0 0 0 1 0 0 14 0 1379.6277 Q12929 Q12929 657 670 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 2 0.012084 49.621 By MS/MS 1 561640 561640 0 1780 1073 1903 4003 3242 3242 1232 1 QNTVHHGKDTVVR FARAHLQKQNTVHHGK HGKDTVVRITEQPERG K Q N V R I 0 1 1 1 0 1 0 1 2 0 0 1 0 0 0 0 2 0 0 3 0 0 13 1 1489.775 E5RHU8 E5RHU8 96 108 LEPROTL1 yes yes 2 0.0098912 48.527 By MS/MS By matching 1 1 2727800 1242400 1485500 1781 389 1904 4004;4005 3243 3243 1970 1 QPDISCILGTGGKSPR PTSRSLLRQPDISCIL GTGGKSPRLTQSSGFF R Q P P R L 0 1 0 1 1 1 0 3 0 2 1 1 0 0 2 2 1 0 0 0 0 0 16 1 1684.8567 G3V1T4;P57740 G3V1T4 73 88 NUP107 Nuclear pore complex protein Nup107 yes no 3 0.0016276 64.83 By MS/MS By MS/MS 1 1 2746400 1356700 1389700 1782 550 1905 4006;4007 3244;3245 3244 645;2020 2 QPLLLSEDEEDTKR PVGGNYGKQPLLLSED EDEEDTKRVVRSAKDK K Q P K R V 0 1 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 14 1 1671.8315 H3BPE4;Q99613;B5ME19 H3BPE4 34 47 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 1.7175E-87 173.33 By MS/MS By MS/MS 2 2 65099000 36113000 28986000 1783 283 1906 4008;4009;4010;4011 3246;3247;3248;3249;3250 3247 344 5 QPLNTTRINAAEIESRVR LGTVLQLKQPLNTTRI AEIESRVRELSKLAET K Q P V R E 2 3 2 0 0 1 2 0 0 2 1 0 0 0 1 1 2 0 0 1 0 0 18 2 2067.1185 Q06124;H0YF12 Q06124 214 231 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 3 0.0036814 46.319 By matching By MS/MS 1 1 4622100 3105800 1516300 1784 1054 1907 4012;4013 3251 3251 36 1209;2144 1 QPTPPFFGR GGFDGQARQPTPPFFG PTPPFFGRDRSPLRRS R Q P G R D 0 1 0 0 0 1 0 1 0 0 0 0 0 2 3 0 1 0 0 0 0 0 9 0 1045.5345 Q96PK6 Q96PK6 204 212 RBM14 RNA-binding protein 14 yes yes 2 0.00018357 134.84 By MS/MS By MS/MS 1 1 19812000 9454300 10357000 1785 1345 1908 4014;4015 3252;3253;3254;3255;3256;3257;3258;3259;3260 3256 2207 9 QPTPPSEAAASK VEPVPVTKQPTPPSEA PSEAAASKKKPGQKKS K Q P S K K 3 0 0 0 0 1 1 0 0 0 0 1 0 0 3 2 1 0 0 0 0 0 12 0 1182.5881 Q86UP2 Q86UP2 151 162 KTN1 Kinectin yes yes 2 0.0037193 84.817 By MS/MS By matching 1 1 1874600 1042300 832290 1786 1231 1909 4016;4017 3261 3261 2188 1 QQASKSPYNGVR VKKEPEDRQQASKSPY KSPYNGVRKDSKRSRN R Q Q V R K 1 1 1 0 0 2 0 1 0 0 0 1 0 0 1 2 0 0 1 1 0 0 12 1 1333.6739 Q9UK58 Q9UK58 369 380 CCNL1 Cyclin-L1 yes yes 2 0.0083356 67.519 By matching By MS/MS 1 1 969230 445910 523310 1787 1462 1910 4018;4019 3262 3262 1768 1 QQFYHSVQDLSGGSR CVDMSTNRQQFYHSVQ QDLSGGSRQHEAPSNR R Q Q S R Q 0 1 0 1 0 3 0 2 1 0 1 0 0 1 0 3 0 0 1 1 0 0 15 0 1707.7965 P10398 P10398 152 166 ARAF Serine/threonine-protein kinase A-Raf yes yes 2 0.0023139 77.597 By MS/MS 1 2290200 2290200 0 1788 880 1911 4020 3263 3263 2397 1 QQPQPSQTESPQEAQIIQAK RSSRLQAKQQPQPSQT EAQIIQAKKRKTTQFT K Q Q A K K 2 0 0 0 0 7 2 0 0 2 0 1 0 0 3 2 1 0 0 0 0 0 20 0 2235.1131 E5RHN2;E5RK20;Q8WUE3;O96020 E5RHN2 12 31 CCNE2 G1/S-specific cyclin-E2 yes no 3 0.0093094 43.611 By MS/MS By matching 1 1 1512200 763400 748750 1789 388 1912 4021;4022 3264 3264 443 1 QQQEPTGEPSPK RGRGRPRKQQQEPTGE PTGEPSPKRPRGRPKG K Q Q P K R 0 0 0 0 0 3 2 1 0 0 0 1 0 0 3 1 1 0 0 0 0 0 12 0 1324.6259 P52926;F5H2U8;F5H2A4;F5H6H0 P52926 35 46 HMGA2 High mobility group protein HMGI-C yes no 2 0.0016973 81.239 By MS/MS By MS/MS 2 2 2914100 1559100 1355000 1790 1002 1913 4023;4024;4025;4026 3265;3266;3267;3268 3267 1148;2138 4 QQSEEDLLLQDFSR MAPKGSSKQQSEEDLL LLLQDFSRNLSAKSSA K Q Q S R N 0 1 0 2 0 3 2 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 14 0 1706.8111 C9JA28;Q9UNL2 C9JA28 9 22 SSR3 Translocon-associated protein subunit gamma yes no 2 0.00156 78.692 By MS/MS By MS/MS 1 1 3450000 1918000 1532000 1791 326 1914 4027;4028 3269;3270 3269 390 2 QQTEKPESEDEWERTER KKKTGGSKQQTEKPES DEWERTERERLQDLEE K Q Q E R E 0 2 0 1 0 2 6 0 0 0 0 1 0 0 1 1 2 1 0 0 0 0 17 2 2175.9669 A2AB15;A0A140T947;O60231 A2AB15 93 109 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 3 0.012909 51.03 By MS/MS By matching 2 1 32230000 24370000 7859600 1792 205 1915 4029;4030;4031 3271 3271 1 QQVPSGESAILDR KELLIFNKQQVPSGES GESAILDRVADGMVFG K Q Q D R V 1 1 0 1 0 2 1 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 13 0 1398.7103 P09874 P09874 270 282 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0079371 62.303 By MS/MS By matching 1 1 1174100 587560 586540 1793 876 1916 4032;4033 3272 3272 1 QRGSETDTDSEIHESASDKDSLSK EVVPKRRRQRGSETDT SDKDSLSKGKLPKREE R Q R S K G 1 1 0 4 0 1 3 1 1 1 1 2 0 0 0 6 2 0 0 0 0 0 24 2 2621.1689 E7EPN9;Q9Y520 E7EPN9 1262 1285 PRRC2C Protein PRRC2C yes no 4 0.0015628 53.96 By matching By MS/MS 1 1 5678400 3615000 2063500 1794 406 1917 4034;4035 3273 3273 1979 1 QRHDGAFLIR KAEEMLSKQRHDGAFL HDGAFLIRESESAPGD K Q R I R E 1 2 0 1 0 1 0 1 1 1 1 0 0 1 0 0 0 0 0 0 0 0 10 1 1211.6523 P62993;J3KT38;J3QRL5 P62993 77 86 GRB2 Growth factor receptor-bound protein 2 yes no 3 3.801E-05 98.754 By MS/MS 1 951720 951720 0 1795 1028 1918 4036 3274 3274 1 QRPDLGSAQK GVRGTPVRQRPDLGSA PDLGSAQKGLQVDLQS R Q R Q K G 1 1 0 1 0 2 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 1 1098.5782 E5RFR3;E5RFJ8;P33991 E5RFR3 114 123 MCM4 DNA replication licensing factor MCM4 yes no 2 2.0858E-05 105.36 By MS/MS By MS/MS 1 1 1997200 1082200 915000 1796 383 1919 4037;4038 3275;3276 3275 439 2 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER ________________ EPEEQEERKPSATQQK R Q R E R K 3 3 0 5 0 3 6 1 0 0 0 0 0 0 4 7 1 0 0 0 0 0 33 2 3588.4956 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 6 38 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 yes no 4 0.00036184 46.145 By MS/MS By matching 1 1 5548600 3240600 2308000 1797 220 1920 4039;4040 3277 3277 273 1 QRSPIALPVK RPSSFRDRQRSPIALP SPIALPVKQEPPQIDA R Q R V K Q 1 1 0 0 0 1 0 0 0 1 1 1 0 0 2 1 0 0 0 1 0 0 10 1 1107.6764 Q8TF01 Q8TF01 209 218 PNISR Arginine/serine-rich protein PNISR yes yes 2;3 6.9617E-05 119.34 By MS/MS By MS/MS 2 2 5012000 2762700 2249300 1798 1288 1921 4041;4042;4043;4044 3278;3279;3280 3280 1521 3 QRSPSPAPAPAPAAAAGPPTR TQRRERYRQRSPSPAP AAAGPPTRKKSRRERK R Q R T R K 7 2 0 0 0 1 0 1 0 0 0 0 0 0 7 2 1 0 0 0 0 0 21 1 1967.0337 Q9H7N4 Q9H7N4 496 516 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 3 0.0026961 69.581 By MS/MS By matching 1 1 14220000 7112300 7107500 1799 1404 1922 4045;4046 3281 3281 1695;1696 1 QSFDDNDSEELEDKDSK KKGQKGKKQSFDDNDS ELEDKDSKSKKTAKPK K Q S S K S 0 0 1 5 0 1 3 0 0 0 1 2 0 1 0 3 0 0 0 0 0 0 17 1 1999.8131 A0A087WUT6;O60841 A0A087WUT6 106 122 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0024456 56.553 By matching By MS/MS 1 1 37086000 21402000 15685000 1800 28 1923 4047;4048 3282 3282 25;26 1 QSGLSSLVNGKSPIR ADMNESCKQSGLSSLV VNGKSPIRSLMHRSAR K Q S I R S 0 1 1 0 0 1 0 2 0 1 2 1 0 0 1 4 0 0 0 1 0 0 15 1 1541.8526 H0Y612;Q9UPN9 H0Y612 612 626 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 3 0.00097553 73.877 By MS/MS 1 694890 0 694890 1801 593 1924 4049 3283 3283 712 1 QSGSPTLDTAPNGR FGKNIYRKQSGSPTLD LDTAPNGRYGIGYLMA K Q S G R Y 1 1 1 1 0 1 0 2 0 0 1 0 0 0 2 2 2 0 0 0 0 0 14 0 1399.6692 Q9H2J7 Q9H2J7 698 711 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.0030937 61.344 By MS/MS By MS/MS 1 2 3213800 1894900 1318900 1802 1395 1925;1926 4050;4051;4052 3284;3285 3284 1682;1683 2 QSHSESPSLQSK DTSSPEVRQSHSESPS ESPSLQSKSQTSPKGG R Q S S K S 0 0 0 0 0 2 1 0 1 0 1 1 0 0 1 5 0 0 0 0 0 0 12 0 1313.6212 Q9UQ35 Q9UQ35 1078 1089 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0061358 62.035 By MS/MS By MS/MS 2 1 5191900 3282100 1909800 1803 1487 1927 4053;4054;4055 3286;3287;3288 3286 1806;1807;1808 3 QSLPASPR RERSLKKRQSLPASPR QSLPASPRARLSASTA R Q S P R A 1 1 0 0 0 1 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 8 0 854.46102 H0YF21;Q3KQU3 H0YF21 24 31 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.0080434 97.472 By MS/MS 1 630720 0 630720 1804 616 1928 4056 3289 3289 738 1 QSNASSDVEVEEK SSQQAATKQSNASSDV SDVEVEEKETSVSKED K Q S E K E 1 0 1 1 0 1 3 0 0 0 0 1 0 0 0 3 0 0 0 2 0 0 13 0 1420.6318 O75475 O75475 101 113 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 1.2426E-160 198.81 By MS/MS By MS/MS 1 2 14830000 8166500 6663600 1805 798 1929 4057;4058;4059 3290;3291;3292 3290 935;936 3 QSNASSDVEVEEKETSVSK SSQQAATKQSNASSDV EKETSVSKEDTDHEEK K Q S S K E 1 0 1 1 0 1 4 0 0 0 0 2 0 0 0 5 1 0 0 3 0 0 19 1 2051.9495 O75475 O75475 101 119 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 0.0075096 48.376 By matching By MS/MS 1 1 2961000 1746400 1214700 1806 798 1930 4060;4061 3293 3293 935;936 1 QSNASSDVEVEEKETSVSKEDTDHEEK SSQQAATKQSNASSDV EDTDHEEKASNEDVTK K Q S E K A 1 0 1 3 0 1 7 0 1 0 0 3 0 0 0 5 2 0 0 3 0 0 27 2 3035.3327 O75475 O75475 101 127 PSIP1 PC4 and SFRS1-interacting protein yes yes 4 0.002651 44.74 By MS/MS 1 8447600 0 8447600 1807 798 1931 4062 3294 3294 935;936;2081 1 QSPASPPPLGGGAPVR ASPSPTSRQSPASPPP LGGGAPVRTAKAERRH R Q S V R T 2 1 0 0 0 1 0 3 0 0 1 0 0 0 5 2 0 0 0 1 0 0 16 0 1486.7892 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1363 1378 SCRIB Protein scribble homolog yes no 2 1.9227E-19 121.99 By MS/MS By MS/MS 1 1 16678000 9339200 7338500 1808 178 1932 4063;4064 3295;3296;3297 3297 225 3 QSPGPALAR AAAAASVRQSPGPALA SPGPALARLEGREFEF R Q S A R L 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 9 0 895.48756 P85037 P85037 100 108 FOXK1 Forkhead box protein K1 yes yes 2 0.0087702 68.626 By MS/MS By MS/MS 1 1 5020000 2557900 2462100 1809 1034 1933 4065;4066 3298;3299 3298 1176 2 QSQQPMKPISPVKDPVSPASQK LEGDHTIRQSQQPMKP PVSPASQKMVIQGPSS R Q S Q K M 1 0 0 1 0 4 0 0 0 1 0 3 1 0 5 4 0 0 0 2 0 0 22 2 2376.2471 Q12888;A6NNK5 Q12888 1085 1106 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.0063182 41.615 By MS/MS By matching 1 1 8743700 5592800 3151000 1810 1069 1934 4067;4068 3300 3300 192 1226;1227 1 QSSLTFQSSDPEQMR GPSFTVMRQSSLTFQS SSDPEQMRQSLLTAIR R Q S M R Q 0 1 0 1 0 3 1 0 0 0 1 0 1 1 1 4 1 0 0 0 0 0 15 0 1739.7785 A0A0X1KG75;A0A0D9SG04;Q53SF7 A0A0X1KG75 1108 1122 COBLL1 Cordon-bleu protein-like 1 yes no 2 0.0013912 77.593 By MS/MS 1 817780 0 817780 1811 173 1935 4069 3301 3301 217;218 1 QSSSSDTDLSLTPK SPSKSYSRQSSSSDTD TDLSLTPKTGMGSGSA R Q S P K T 0 0 0 2 0 1 0 0 0 0 2 1 0 0 1 5 2 0 0 0 0 0 14 0 1464.6944 Q86YS7;H0YFE9 Q86YS7 303 316 C2CD5 C2 domain-containing protein 5 yes no 2 0.00095029 81.632 By matching By MS/MS 1 1 1415800 789750 626020 1812 1239 1936 4070;4071 3302 3302 1462 1 QTALVELVK EKERQIKKQTALVELV TALVELVKHKPKATKE K Q T V K H 1 0 0 0 0 1 1 0 0 0 2 1 0 0 0 0 1 0 0 2 0 0 9 0 999.59645 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 550 558 ALB Serum albumin yes no 2 0.0096621 72.879 By MS/MS By matching 1 1 1141300 796060 345260 + 1813 152 1937 4072;4073 3303 3303 1 QTEPVSPVLK AIENCERRQTEPVSPV EPVSPVLKRIKRCLRS R Q T L K R 0 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 1 0 0 2 0 0 10 0 1096.6128 Q8IYH5 Q8IYH5 108 117 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.012594 58.116 By matching By MS/MS 1 1 2083100 1179800 903260 1814 1247 1938 4074;4075 3304 3304 1 QTEPVSPVLKR AIENCERRQTEPVSPV PVSPVLKRIKRCLRSE R Q T K R I 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 1 1 0 0 2 0 0 11 1 1252.7139 Q8IYH5 Q8IYH5 108 118 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.013348 65.043 By MS/MS By matching 1 1 3282100 1912900 1369200 1815 1247 1939 4076;4077 3305 3305 1 QTLPSSPTTTK TVNPDRIKQTLPSSPT PSSPTTTKSSPSDPMT K Q T T K S 0 0 0 0 0 1 0 0 0 0 1 1 0 0 2 2 4 0 0 0 0 0 11 0 1159.6085 F8VW64;F8VWX1;F8W659;J3KQU3;P51513 F8VW64 27 37 NOVA1 RNA-binding protein Nova-1 yes no 2 6.0368E-06 105.66 By MS/MS 1 5731800 5731800 0 1816 520 1940 4078 3306 3306 609 1 QVAEQGGDLSPAANR RIQVAQEKQVAEQGGD DLSPAANRSQKASQSR K Q V N R S 3 1 1 1 0 2 1 2 0 0 1 0 0 0 1 1 0 0 0 1 0 0 15 0 1511.7328 O94804 O94804 429 443 STK10 Serine/threonine-protein kinase 10 yes yes 2 0.0012254 62.104 By MS/MS By matching 1 1 5425800 3459900 1965900 1817 808 1941 4079;4080 3307 3307 953 1 QVGETSAPGDTLDGTPR KENDTGSKQVGETSAP DTLDGTPRTLNTVFDF K Q V P R T 1 1 0 2 0 1 1 3 0 0 1 0 0 0 2 1 3 0 0 1 0 0 17 0 1699.8013 E9PMR6;Q9NZN5 E9PMR6 586 602 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2 0.0088042 73.279 By MS/MS By matching 1 1 6342500 3257100 3085400 1818 468 1942 4081;4082 3308 3308 2001 1 QVLQSTQSPR EEELKRQRQVLQSTQS LQSTQSPRTKNAPSLP R Q V P R T 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 10 0 1142.6044 Q9Y2D5 Q9Y2D5 741 750 AKAP2 A-kinase anchor protein 2 yes yes 2 0.00012622 112.11 By MS/MS By MS/MS 1 1 4401200 2209400 2191800 1819 1495 1943 4083;4084 3309;3310;3311 3311 1828;2241 3 QVQEFLKDGDDVIIIGVFK SKEILTLKQVQEFLKD VIIIGVFKGESDPAYQ K Q V F K G 0 0 0 3 0 2 1 2 0 3 1 2 0 2 0 0 0 0 0 3 0 0 19 1 2162.1623 P13667 P13667 295 313 PDIA4 Protein disulfide-isomerase A4 yes yes 3 0.0012286 55.912 By MS/MS 1 1200700 1200700 0 1820 897 1944 4085 3312 3312 1 QVQNLVNKSK EKILEYKRQVQNLVNK QNLVNKSKKIVQLKPR R Q V S K K 0 0 2 0 0 2 0 0 0 0 1 2 0 0 0 1 0 0 0 2 0 0 10 1 1156.6564 P15924 P15924 434 443 DSP Desmoplakin yes yes 2 0.01943 49.28 By MS/MS 1 3564800 0 3564800 1821 902 1945 4086 3313 3313 1 QYATLDVYNPFETR VIQHRPSRQYATLDVY VYNPFETREPPPAYEP R Q Y T R E 1 1 1 1 0 1 1 0 0 0 1 0 0 1 1 0 2 0 2 1 0 0 14 0 1715.8155 O14828 O14828 34 47 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 6.1784E-16 134.49 By MS/MS By matching 1 1 14425000 8761800 5663100 1822 764 1946 4087;4088 3314 3314 2381 1 QYPDLETKYETK KVVRKGRRQYPDLETK LETKYETKKLSLENDI R Q Y T K K 0 0 0 1 0 1 2 0 0 0 1 2 0 0 1 0 2 0 2 0 0 0 12 1 1513.73 Q8N141 Q8N141 74 85 ZFP82 Zinc finger protein 82 homolog yes yes 3 0.0069072 49.35 By MS/MS By matching 1 1 1561700 935320 626390 1823 1249 1947 4089;4090 3315 3315 1 RADLNQGIGEPQSPSR ELSAKLLRRADLNQGI GEPQSPSRRVFNPYTE R R A S R R 1 2 1 1 0 2 1 2 0 1 1 0 0 0 2 2 0 0 0 0 0 0 16 1 1723.8602 Q96C19 Q96C19 62 77 EFHD2 EF-hand domain-containing protein D2 yes yes 3 0.0047489 57.52 By matching By MS/MS 1 1 897760 406660 491100 1824 1323 1948 4091;4092 3316 3316 1557;1558 1 RAEDGSVIDYELIDQDAR MVALAKGRRAEDGSVI ELIDQDARDLYDAGVK R R A A R D 2 2 0 4 0 1 2 1 0 2 1 0 0 0 0 1 0 0 1 1 0 0 18 1 2063.976 H0YMD0;H0YMU9;H0YN42;P07355;H0YNA0;H0YN28;H0YL33;H0YNP5;H0YM50 H0YMD0 179 196 ANXA2 Annexin;Annexin A2 yes no 3 0.016605 35.044 By MS/MS By matching 1 1 786450 406220 380230 1825 628 1949 4093;4094 3317 3317 1 RAEQLKLFEMLVSEAR LGDGVEERRAEQLKLF EMLVSEARQPLLRHGP R R A A R Q 2 2 0 0 0 1 3 0 0 0 3 1 1 1 0 1 0 0 0 1 0 0 16 2 1919.0299 E9PJK5;Q8N612 E9PJK5 127 142 FAM160A2 FTS and Hook-interacting protein yes no 2 0.015328 48.044 By MS/MS 1 0 0 0 1826 456 1950 4095 3318 3318 78 1 RALPNNTSSSPQPK ELPPGSTKRALPNNTS TSSSPQPKKKPLDGEY K R A P K K 1 1 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 14 1 1495.7743 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 147 160 TP53 Cellular tumor antigen p53 yes no 2 0.009707 56.482 By matching By MS/MS 1 1 4253500 2095200 2158400 1827 65 1951 4096;4097 3319 3319 72;73 1 RASGLSTEGATGPSADTSGSELDGR PRPRRRSRRASGLSTE SGSELDGRCSLRRGSS R R A G R C 3 2 0 2 0 0 2 5 0 0 2 0 0 0 1 5 3 0 0 0 0 0 25 1 2378.0946 Q7Z628 Q7Z628 19 43 NET1 Neuroepithelial cell-transforming gene 1 protein yes yes 3 0.00096279 63.115 By MS/MS By MS/MS 1 1 3724600 2507100 1217500 1828 1224 1952 4098;4099 3320;3321 3320 1437;1438;2185 2 RASGQAFELILSPR IQVKELEKRASGQAFE FELILSPRSKESVPEF K R A P R S 2 2 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 14 1 1543.8471 A2A2D0;P16949 A2A2D0 14 27 STMN1 Stathmin yes no 2;3 1.4437E-07 102.39 By MS/MS By MS/MS 3 3 11019000 6366700 4652600 1829 223 1953;1954 4100;4101;4102;4103;4104;4105 3322;3323;3324;3325;3326;3327 3324 275;276 6 RASISEPSDTDPEPR VKSRVRVRRASISEPS SDTDPEPRTLNPSPAG R R A P R T 1 2 0 2 0 0 2 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 15 1 1655.7751 C9JQV3;Q8N1F8 C9JQV3 385 399 STK11IP Serine/threonine-protein kinase 11-interacting protein yes no 2;3 3.3503E-05 96.562 By MS/MS By MS/MS 2 2 10647000 6499100 4147600 1830 338 1955 4106;4107;4108;4109 3328;3329;3330 3330 400 3 RASLSEIGFGK QPMSRRSRRASLSEIG LSEIGFGKMETYIKLE R R A G K M 1 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 0 0 0 11 1 1163.6299 F5H6Z0;Q00537 F5H6Z0 125 135 CDK17 Cyclin-dependent kinase 17 yes no 2 0.0014053 96.464 By matching By MS/MS 1 1 4332900 2369800 1963200 1831 504 1956 4110;4111 3331 3331 593 1 RASPSKPASAPASR ADAKAPEKRASPSKPA PASAPASRSGSKSTQT K R A S R S 4 2 0 0 0 0 0 0 0 0 0 1 0 0 3 4 0 0 0 0 0 0 14 2 1381.7426 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4;B5MEG9 E7EVA0 1930 1943 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0045547 66.261 By MS/MS By MS/MS 1 1 14569000 8177400 6391900 1832 427 1957 4112;4113 3332;3333 3332 500 2 RASPSPPPK SPPPPPKRRASPSPPP ASPSPPPKRRVSHSPP R R A P K R 1 1 0 0 0 0 0 0 0 0 0 1 0 0 4 2 0 0 0 0 0 0 9 1 935.51886 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 633 641 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.013748 56.087 By matching By MS/MS 1 1 1767500 937110 830340 1833 247 1958 4114;4115 3334 3334 1 RASSASVPAVGASAEGTR RRQEPLRRRASSASVP GASAEGTRRDRLGSYS R R A T R R 5 2 0 0 0 0 1 2 0 0 0 0 0 0 1 4 1 0 0 2 0 0 18 1 1672.8493 V9GYZ0;Q9BZ23 V9GYZ0 43 60 PANK2 Pantothenate kinase 2, mitochondrial yes no 2 0.0020182 59.116 By MS/MS By matching 1 1 1377100 549260 827860 1834 1382 1959 4116;4117 3335 3335 1649;1650 1 RASSLNVLNVGGK EPKNPGMKRASSLNVL NVLNVGGKAAEDRFQE K R A G K A 1 1 2 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 2 0 0 13 1 1313.7415 H0YG16;H0YJK1;G3V5R9 H0YG16 228 240 KLC1 yes no 2 0.00087889 93.51 By matching By MS/MS 1 1 3687400 1853200 1834200 1835 619 1960 4118;4119 3336 3336 741 1 RDGPGLERSPGEPGGAAPER EPLRKRPRRDGPGLER PGGAAPEREVPAAARG R R D E R E 2 3 0 1 0 0 3 5 0 0 1 0 0 0 4 1 0 0 0 0 0 0 20 2 2003.9773 Q96EB6 Q96EB6 39 58 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 3 0.010228 51.225 By MS/MS By matching 1 1 7570500 5635200 1935300 1836 1328 1961 4120;4121 3337 3337 1565 1 RDSDGVDGFEAEGK IHNNRKRRRDSDGVDG DGFEAEGKKDKKDYDN R R D G K K 1 1 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1480.643 Q96KR1 Q96KR1 1052 1065 ZFR Zinc finger RNA-binding protein yes yes 2 1.2056E-07 106.19 By matching By MS/MS 1 1 10824000 6183100 4640600 1837 1340 1962 4122;4123 3338 3338 1589 1 RDSDGVDGFEAEGKK IHNNRKRRRDSDGVDG GFEAEGKKDKKDYDNF R R D K K D 1 1 0 3 0 0 2 3 0 0 0 2 0 1 0 1 0 0 0 1 0 0 15 2 1608.738 Q96KR1 Q96KR1 1052 1066 ZFR Zinc finger RNA-binding protein yes yes 3 0.00050214 84.113 By MS/MS By MS/MS 1 1 4524800 2607200 1917500 1838 1340 1963 4124;4125 3339;3340 3339 1589 2 RDSFDDR WEEKRHFRRDSFDDRG RRDSFDDRGPSLNPVL R R D D R G 0 2 0 3 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 7 1 909.39406 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 186 192 MATR3 Matrin-3 yes no 2 0.010846 85.533 By matching By MS/MS 1 2 1878200 826540 1051700 1839 191 1964 4126;4127;4128 3341;3342 3341 238 1 RDSFDDRGPSLNPVLDYDHGSR WEEKRHFRRDSFDDRG LDYDHGSRSQESGYYD R R D S R S 0 3 1 5 0 0 0 2 1 0 2 0 0 1 2 3 0 0 1 1 0 0 22 2 2517.1633 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 186 207 MATR3 Matrin-3 yes no 4 0.00047922 63.044 By MS/MS By MS/MS 1 1 18851000 11704000 7146300 1840 191 1965 4129;4130 3343;3344 3344 238;239 2 RDSFDNCSLGESSK NAIKRLHKRDSFDNCS CSLGESSKIGISDISS K R D S K I 0 1 1 2 1 0 1 1 0 0 1 1 0 1 0 4 0 0 0 0 0 0 14 1 1600.6787 Q5UIP0 Q5UIP0 1686 1699 RIF1 Telomere-associated protein RIF1 yes yes 2;3 0.00054946 92.427 By MS/MS By MS/MS 2 2 26830000 15222000 11607000 1841 1174 1966 4131;4132;4133;4134 3345;3346;3347;3348 3345 1380 4 RDSLEEGELR NSDDRDSKRDSLEEGE SLEEGELRDHCMEITI K R D L R D 0 2 0 1 0 0 3 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 1 1202.5891 E9PFJ2;A0A087WYI9;A0A087X1I0;J3KS35;E7ESP2;Q5QPR4;J3QR29;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 E9PFJ2 45 54 CDK11A;CDK11B;CDC2L1 Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B yes no 2 0.0051083 73.36 By MS/MS By matching 1 1 3492100 2073800 1418300 1842 57 1967 4135;4136 3349 3349 64 1 RDSLTGSSDLYK SNTGSGSRRDSLTGSS TGSSDLYKRTSSSLTP R R D Y K R 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 0 0 12 1 1340.6572 H0YDK8;E9PR38;Q5T1Z4;Q5T1Z8;Q14671 H0YDK8 419 430 PUM1 Pumilio homolog 1 yes no 2 7.4196E-36 155.06 By MS/MS By MS/MS 1 1 13362000 7257500 6104900 1843 476 1968 4137;4138 3350;3351 3351 562 2 RDSLTGSSDLYKR SNTGSGSRRDSLTGSS GSSDLYKRTSSSLTPI R R D K R T 0 2 0 2 0 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 0 0 13 2 1496.7583 H0YDK8;E9PR38;Q5T1Z4;Q5T1Z8;Q14671 H0YDK8 419 431 PUM1 Pumilio homolog 1 yes no 2 0.0084067 73.722 By matching By MS/MS 1 1 2410300 1483100 927210 1844 476 1969 4139;4140 3352 3352 562 1 RDSSESQLASTESDKPTTGR PCLLMELRRDSSESQL SDKPTTGRVYESDSSN R R D G R V 1 2 0 2 0 1 2 1 0 0 1 1 0 0 1 5 3 0 0 0 0 0 20 2 2151.004 K7EQH1;A0A087WVF1;Q5BIX2;Q96B23 K7EQH1 64 83 C18orf25;ARKL1 Uncharacterized protein C18orf25 yes no 3 3.6394E-28 120.31 By MS/MS By MS/MS 1 1 27500000 17374000 10126000 1845 34 1970 4141;4142 3353;3354 3354 43 2 RDSSSHEETPGSHPLYGHGECK QPTVLTSRRDSSSHEE LYGHGECKWPGCETLC R R D C K W 0 1 0 1 1 0 3 3 3 0 1 1 0 0 2 4 1 0 1 0 0 0 22 1 2466.0618 B7ZBM3;Q8IVH2 B7ZBM3 289 310 FOXP4 Forkhead box protein P4 yes no 4 0.00034789 64.028 By matching By MS/MS 1 1 1811900 773110 1038800 1846 293 1971 4143;4144 3355 3355 351;352;353 1 REEGPPPPSPDGASSDAEPEPPSGR TQPSTARRREEGPPPP EPEPPSGRTESPATAA R R E G R T 2 2 0 2 0 0 4 3 0 0 0 0 0 0 8 4 0 0 0 0 0 0 25 1 2514.1259 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 14 38 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 0.015702 45.972 By MS/MS By matching 1 1 2951000 1778400 1172600 1847 306 1972 4145;4146 3356 3356 1 REEPEALYAAVNK IIPGSEVKREEPEALY ALYAAVNKKPTSAAYS K R E N K K 3 1 1 0 0 0 3 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 13 1 1488.7573 A0A087WVF7;Q9NZM3 A0A087WVF7 944 956 ITSN2 Intersectin-2 yes no 2 0.0055949 59.198 By MS/MS By matching 1 1 1197100 506640 690500 1848 35 1973 4147;4148 3357 3357 2257 1 RESPSEERLEPK FPRVPLPRRESPSEER SEERLEPKREVKEPRK R R E P K R 0 2 0 0 0 0 4 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 12 2 1455.7318 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 921 932 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 3 0.0097005 65.695 By MS/MS By matching 1 1 1592900 991250 601640 1849 123 1974 4149;4150 3358 3358 150 1 RESPSPAPK TKHKGTEKRESPSPAP ESPSPAPKPRKVELSE K R E P K P 1 1 0 0 0 0 1 0 0 0 0 1 0 0 3 2 0 0 0 0 0 0 9 1 967.50869 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 443 451 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0084674 80.219 By matching By MS/MS 1 1 10699000 5676000 5023100 1850 247 1975 4151;4152 3359 3359 310 1 RESPSPAPKPR TKHKGTEKRESPSPAP PSPAPKPRKVELSESE K R E P R K 1 2 0 0 0 0 1 0 0 0 0 1 0 0 4 2 0 0 0 0 0 0 11 2 1220.6626 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 443 453 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.0019262 85.45 By MS/MS By MS/MS 1 1 64009000 37041000 26968000 1851 247 1976 4153;4154 3360;3361;3362 3362 310 3 RETLRGADSAYYQVGQTGK SPDLSSQKRETLRGAD YQVGQTGKEGTENQGV K R E G K E 2 2 0 1 0 2 1 3 0 0 1 1 0 0 0 1 2 0 2 1 0 0 19 2 2099.0396 Q9Y2I7 Q9Y2I7 1762 1780 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 2 0.018662 41.684 By MS/MS 1 0 0 0 1852 1498 1977 4155 3363 3363 1 RFSEGVLQSPSQDQEK RPTSLVQRRFSEGVLQ SPSQDQEKLGGSLAAL R R F E K L 0 1 0 1 0 3 2 1 0 0 1 1 0 1 1 3 0 0 0 1 0 0 16 1 1833.8857 Q9C0C2 Q9C0C2 427 442 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2;3 0.0026025 62.237 By MS/MS By matching 2 2 4248400 2170100 2078300 1853 1385 1978 4156;4157;4158;4159 3364;3365 3364 1660 2 RFSQDDTSVFTSKMQSR WNKEDLQRRFSQDDTS FTSKMQSRQMGISGKN R R F S R Q 0 2 0 2 0 2 0 0 0 0 0 1 1 2 0 4 2 0 0 1 0 0 17 2 2018.948 D6RA03 D6RA03 1042 1058 RIMS2 yes yes 2 0.0068947 41.052 By matching By MS/MS 1 1 464590 249320 215270 1854 365 1979 4160;4161 3366 3366 423;424;425;1964;1965 1 RGNDPLTSSPGR ASSPAQRRRGNDPLTS PLTSSPGRSSRRTDAL R R G G R S 0 2 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 12 1 1255.6269 P49736;C9J013;C9JZ21;F8WDM3 P49736 19 30 MCM2 DNA replication licensing factor MCM2 yes no 2 5.4741E-27 153.14 By matching By MS/MS 1 1 54212000 31314000 22898000 1855 978 1980 4162;4163 3367 3367 1119 1 RGSFSSENYWR VLLPTHRRRGSFSSEN FSSENYWRKSYESSED R R G W R K 0 2 1 0 0 0 1 1 0 0 0 0 0 1 0 3 0 1 1 0 0 0 11 1 1387.6269 K7ER58;Q6P6C2 K7ER58 18 28 ALKBH5 RNA demethylase ALKBH5 yes no 2 5.1166E-06 99.161 By MS/MS By MS/MS 1 1 8162700 8162700 0 1856 738 1981 4164;4165 3368;3369 3369 858 2 RGSGDTSSLIDPDTSLSELR PLSGNSSRRGSGDTSS DTSLSELRDIYDLKDQ R R G L R D 0 2 0 3 0 0 1 2 0 1 3 0 0 0 1 5 2 0 0 0 0 0 20 1 2105.0237 C9JSU1;Q9Y608 C9JSU1 94 113 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 3 0.0068137 65.25 By MS/MS By MS/MS 1 1 2876800 1578900 1298000 1857 340 1982 4166;4167 3370;3371 3371 404;405;406 2 RGSLEMSSDGEPLSR SSATSGGRRGSLEMSS SDGEPLSRMDSEDSIS R R G S R M 0 2 0 1 0 0 2 2 0 0 2 0 1 0 1 4 0 0 0 0 0 0 15 1 1619.7573 Q6ZN18 Q6ZN18 204 218 AEBP2 Zinc finger protein AEBP2 yes yes 3 0.0026205 62.617 By MS/MS 1 454060 0 454060 1858 1209 1983 4168 3372 3372 1414 1 RGSLSNAGDPEIVK DESEEEGRRGSLSNAG AGDPEIVKSPSDPKQY R R G V K S 1 1 1 1 0 0 1 2 0 1 1 1 0 0 1 2 0 0 0 1 0 0 14 1 1441.7525 F5H7V1;B1AKJ5;O43847 F5H7V1 92 105 NRD1 Nardilysin yes no 2 2.6764E-13 115.87 By matching By MS/MS 1 1 11688000 6626600 5061600 1859 250 1984 4169;4170 3373 3373 322 1 RGSPTTGFIEQK PTPGFSTRRGSPTTGF TTGFIEQKGSPTSAYP R R G Q K G 0 1 0 0 0 1 1 2 0 1 0 1 0 1 1 1 2 0 0 0 0 0 12 1 1319.6834 J3KPS2;Q6ZRV2 J3KPS2 617 628 FAM83H Protein FAM83H yes no 2 1.3947E-08 116.51 By MS/MS By matching 1 1 2722200 1488300 1234000 1860 704 1985 4171;4172 3374 3374 831 1 RGTGQSDDSDIWDDTALIK QEDSVLFRRGTGQSDD WDDTALIKAYDKAVAS R R G I K A 1 1 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 19 1 2091.9709 B4DP61;E7EQZ4;Q16637 B4DP61 23 41 SMN2;SMN1 Survival motor neuron protein yes no 3 0.018219 48.677 By MS/MS By matching 1 1 3110400 1915600 1194700 1861 267 1986 4173;4174 3375 3375 334 1 RHESEEGDSHR SSRSNSRRRHESEEGD SEEGDSHRRHKHKKSK R R H H R R 0 2 0 1 0 0 3 1 2 0 0 0 0 0 0 2 0 0 0 0 0 0 11 1 1337.5709 Q6UN15;H0Y8P7 Q6UN15 551 561 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 3 0.0011769 91.307 By MS/MS 1 260000 260000 0 1862 1203 1987 4175 3376 3376 1411 1 RHPDYSVVLLLR MFLYEYARRHPDYSVV YSVVLLLRLAKTYETT R R H L R L 0 2 0 1 0 0 0 0 1 0 3 0 0 0 1 1 0 0 1 2 0 0 12 1 1466.8358 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 361 372 ALB Serum albumin yes no 3 9.1427E-06 88.803 By MS/MS By MS/MS 1 1 7595400 4904300 2691000 + 1863 152 1988 4176;4177 3377;3378;3379;3380 3377 4 RHPYFYAPELLFFAK KYLYEIARRHPYFYAP PELLFFAKRYKAAFTE R R H A K R 2 1 0 0 0 0 1 0 1 0 2 1 0 3 2 0 0 0 2 0 0 0 15 1 1897.9879 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;H7C013 A0A0C4DGB6 169 183 ALB Serum albumin yes no 3;4 1.7368E-05 91.441 By MS/MS By MS/MS 2 2 17858000 12776000 5081900 + 1864 152 1989 4178;4179;4180;4181 3381;3382;3383 3381 3 RHSEVETDSK VGAGKRKRRHSEVETD SEVETDSKKKKMKLPE R R H S K K 0 1 0 1 0 0 2 0 1 0 0 1 0 0 0 2 1 0 0 1 0 0 10 1 1186.5578 Q9NX58 Q9NX58 274 283 LYAR Cell growth-regulating nucleolar protein yes yes 2 0.003037 83.204 By MS/MS By matching 1 1 1090600 632370 458230 1865 1437 1990 4182;4183 3384 3384 1743 1 RHSGSYLVTSV SSGTQSPKRHSGSYLV GSYLVTSV________ K R H S V - 0 1 0 0 0 0 0 1 1 0 1 0 0 0 0 3 1 0 1 2 0 0 11 1 1204.62 P25054 P25054 2833 2843 APC Adenomatous polyposis coli protein yes yes 2 0.018112 59.975 By matching By MS/MS 1 1 1084500 550230 534320 1866 929 1991 4184;4185 3385 3385 1 RICDLREDSEVSK EEADRGAKRICDLRED REDSEVSKSKEGSPSW K R I S K S 0 2 0 2 1 0 2 0 0 1 1 1 0 0 0 2 0 0 0 1 0 0 13 2 1605.7781 Q7Z2Z1;H0YN97 Q7Z2Z1 1789 1801 TICRR Treslin yes no 2 0.017965 40.496 By matching By MS/MS 1 1 564590 295780 268810 1867 1217 1992 4186;4187 3386 3386 0 RIDFIPVSPAPSPTR VEKSASPKRIDFIPVS SPAPSPTRGIGKQCFS K R I T R G 1 2 0 1 0 0 0 0 0 2 0 0 0 1 4 2 1 0 0 1 0 0 15 1 1651.9046 Q96E09 Q96E09 136 150 FAM122A Protein FAM122A yes yes 3 0.0078306 40.237 By matching By MS/MS 1 1 875420 534500 340920 1868 1327 1993 4188;4189 3387 3387 1563;2203 1 RIDISPSTFR KKSPEIHRRIDISPST DISPSTFRKHGLAHDE R R I F R K 0 2 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 10 1 1190.6408 Q9Y2W1 Q9Y2W1 678 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 2.3446E-06 126.09 By MS/MS By MS/MS 2 1 31349000 17595000 13754000 1869 1501 1994 4190;4191;4192 3388;3389;3390 3389 1841 3 RIDISPSTLR QKSPEIHRRIDISPST DISPSTLRKHTRLAGE R R I L R K 0 2 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 10 1 1156.6564 E9PQN2;E9PKI6;E9PK91;Q9NYF8 E9PQN2 652 661 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 5.9407E-116 190.35 By MS/MS By MS/MS 1 1 79934000 42431000 37503000 1870 457 1995 4193;4194 3391;3392 3391 538 2 RIDISPSTLRK QKSPEIHRRIDISPST ISPSTLRKHTRLAGEE R R I R K H 0 2 0 1 0 0 0 0 0 2 1 1 0 0 1 2 1 0 0 0 0 0 11 2 1284.7514 E9PQN2;E9PKI6;E9PK91;Q9NYF8 E9PQN2 652 662 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.016209 60.364 By MS/MS 1 1584800 1584800 0 1871 457 1996 4195 3393 3393 538 1 RISQSQPVR IIRNPQQRRISQSQPV ISQSQPVRGRDEEQDD R R I V R G 0 2 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 9 1 1069.5992 E7EMW7;O95071 E7EMW7 1541 1549 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.0078124 81.525 By MS/MS By matching 1 1 7003900 4145800 2858100 1872 402 1997 4196;4197 3394 3394 450 1 RISTSDILSEK DKEQNLTRRISTSDIL TSDILSEKKLGEDEEE R R I E K K 0 1 0 1 0 0 1 0 0 2 1 1 0 0 0 3 1 0 0 0 0 0 11 1 1247.6721 O60293 O60293 350 360 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 7.4349E-06 107.17 By MS/MS By matching 1 1 6837700 3208700 3629000 1873 787 1998 4198;4199 3395 3395 920;921 1 RKLSGDQPAAR RKGWESRKRKLSGDQP SGDQPAARTPRSKKKK K R K A R T 2 2 0 1 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 11 2 1197.6578 J3KQ96;E7ETY2;Q13428 J3KQ96 1309 1319 TCOF1 Treacle protein yes no 3 0.018279 57.328 By matching By MS/MS 1 1 3492400 1821900 1670500 1874 422 1999 4200;4201 3396 3396 483 1 RKPEDVLDDDDAGSAPLK IIFIYEKRRKPEDVLD DAGSAPLKSSGQHQND R R K L K S 2 1 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 18 2 1939.9487 A0A087WUV8;P35613 A0A087WUV8 153 170 BSG Basigin yes no 3 4.0738E-09 93.34 By MS/MS By matching 1 1 4840800 2943300 1897500 1875 29 2000 4202;4203 3397 3397 30 1 RKPSPEPEGEVGPPK AVARTARKRKPSPEPE EGEVGPPKINGEAQPW K R K P K I 0 1 0 0 0 0 3 2 0 0 0 2 0 0 5 1 0 0 0 1 0 0 15 2 1602.8366 Q7Z5L9 Q7Z5L9 357 371 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.002552 70.802 By matching By MS/MS 1 1 4112100 2524700 1587500 1876 1223 2001 4204;4205 3398 3398 1434 1 RKSLSDSESDDSK GKEKDGTKRKSLSDSE DSESDDSKSKKKRDAA K R K S K S 0 1 0 3 0 0 1 0 0 0 1 2 0 0 0 5 0 0 0 0 0 0 13 2 1452.6692 Q13185;S4R2Y4 Q13185 91 103 CBX3 Chromobox protein homolog 3 yes no 3 0.018998 53.038 By MS/MS By matching 1 1 6594700 4329000 2265800 1877 1079 2002 4206;4207 3399 3399 1243 1 RLAAAEETAVSPR KRVWSLERRLAAAEET EETAVSPRKSPRPAGP R R L P R K 4 2 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 13 1 1369.7314 Q9BUH6 Q9BUH6 138 150 C9orf142 Protein PAXX yes yes 2 0.0088619 62.469 By matching By MS/MS 1 1 8630000 5953700 2676300 1878 1367 2003 4208;4209 3400 3400 1632 1 RLASTSDIEEKENR YVAPTIPRRLASTSDI DIEEKENRDSSSLRTS R R L N R D 1 2 1 1 0 0 3 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 14 2 1646.8224 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 504 517 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 3 0.0028394 78.78 By MS/MS By MS/MS 1 1 11617000 7424100 4192700 1879 765 2004 4210;4211 3401;3402 3401 892;893 2 RLDFTGNLIEDIEDGTFSK FADIPNLRRLDFTGNL IEDGTFSKLSLLEELS R R L S K L 0 1 1 3 0 0 2 2 0 2 2 1 0 2 0 1 2 0 0 0 0 0 19 1 2169.059 P20774;Q5TBF5 P20774 147 165 OGN Mimecan yes no 3 2.9855E-08 96.391 By MS/MS By MS/MS 1 1 0 0 0 1880 920 2005 4212;4213 3403;3404 3404 2 RLDSSCLESVK ESRNRVKRRLDSSCLE SSCLESVKQKCVKSCN R R L V K Q 0 1 0 1 1 0 1 0 0 0 2 1 0 0 0 3 0 0 0 1 0 0 11 1 1292.6395 F5GZ90;Q9NZJ0 F5GZ90 512 522 DTL Denticleless protein homolog yes no 2 6.3129E-06 107.53 By MS/MS By MS/MS 1 1 8221500 4282000 3939600 1881 491 2006 4214;4215 3405;3406 3405 576;577 2 RLDVVAGSVTVLSGR RRLAELERRLDVVAGS SVTVLSGRRGTELGGA R R L G R R 1 2 0 1 0 0 0 2 0 0 2 0 0 0 0 2 1 0 0 4 0 0 15 1 1527.8733 A0A0C4DFX3;Q9Y6C2 A0A0C4DFX3 368 382 EMILIN1 EMILIN-1 yes no 3 0.00069174 58.159 By MS/MS 1 316030 316030 0 1882 143 2007 4216 3407;3408 3407 2 RLSLDSSCLDSSR SSGGLQSKRLSLDSSC SSCLDSSRDTDNGTPF K R L S R D 0 2 0 2 1 0 0 0 0 0 3 0 0 0 0 5 0 0 0 0 0 0 13 1 1494.7097 A0A0C4DH56;Q9BWT3 A0A0C4DH56 191 203 PAPOLG Poly(A) polymerase gamma yes no 2 0.0041918 73.022 By MS/MS By matching 1 1 5068700 2519500 2549200 1883 166 2008 4217;4218 3409 3409 211 1 RLSLPADIR SPVRDINKRLSLPADI LSLPADIRLPEGYLEK K R L I R L 1 2 0 1 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 9 1 1039.6138 H0YBX5;E5RJM2;E5RGN0;A0A087WZU2;Q00536;E5RIY8;E5RIU4;F8VZY6;F8VQZ9;F5H6Z0;Q00537 H0YBX5 77 85 CDK16;CDK17 Cyclin-dependent kinase 16;Cyclin-dependent kinase 17 no no 2 0.0032077 89.805 By matching By MS/MS 1 1 7363600 3806000 3557700 1884 64;504 2009 4219;4220 3410 3410 70 1 RLSPSASPPR SSPPRKTRRLSPSASP SPSASPPRRRHRPSPP R R L P R R 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 0 0 0 10 1 1066.5883 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 382 391 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0086247 61.344 By MS/MS 1 6844100 0 6844100 1885 247 2010 4221 3411;3412 3411 308;309 2 RLSQPESAEK SSSSVQARRLSQPESA SQPESAEKHVTQRLQP R R L E K H 1 1 0 0 0 1 2 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1143.5884 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 650 659 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 2.4941E-05 113.54 By MS/MS By MS/MS 1 1 18442000 11360000 7081600 1886 412 2011 4222;4223 3413;3414;3415;3416 3415 469 4 RLSQPESAEKHVTQR SSSSVQARRLSQPESA AEKHVTQRLQPERGSP R R L Q R L 1 2 0 0 0 2 2 0 1 0 1 1 0 0 1 2 1 0 0 1 0 0 15 2 1764.9231 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 650 664 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.0023065 62.648 By MS/MS 1 1596700 0 1596700 1887 412 2012 4224 3417 3417 469 1 RLSSLRASTSK QEQIAKRRRLSSLRAS SLRASTSKSESSQK__ R R L S K S 1 2 0 0 0 0 0 0 0 0 2 1 0 0 0 4 1 0 0 0 0 0 11 2 1204.6888 P62753;A2A3R5 P62753 233 243 RPS6 40S ribosomal protein S6 yes no 2 0.00018189 91.076 By MS/MS By MS/MS 1 1 22708000 11545000 11162000 1888 1024 2013 4225;4226 3418;3419 3418 1169;1170;1171 2 RLSSTSLASGHSVR NCSGARKRRLSSTSLA LASGHSVRLGTSESLP R R L V R L 1 2 0 0 0 0 0 1 1 0 2 0 0 0 0 5 1 0 0 1 0 0 14 1 1456.7746 B4DTS2;Q9BZL6;M0QZ82 B4DTS2 195 208 PRKD2 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2 yes no 3 0.0056529 63.443 By MS/MS By matching 1 1 1661700 1099500 562210 1889 269 2014 4227;4228 3420 3420 336;337;1951 1 RLSTHSPFR PRPSEWDKRLSTHSPF LSTHSPFRTLNINGQI K R L F R T 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 9 1 1099.5887 Q4VB86;P11171;A0A1B0GWG0 Q4VB86 465 473 EPB41 Protein 4.1 yes no 3 0.0064799 62.799 By matching By MS/MS 1 1 2958100 1601600 1356500 1890 887 2015 4229;4230 3421 3421 2107 1 RLSTSPDVIQGHQPR RAQQQSQRRLSTSPDV VIQGHQPRDNHTDHGG R R L P R D 0 2 0 1 0 2 0 1 1 1 1 0 0 0 2 2 1 0 0 1 0 0 15 1 1689.8911 Q9Y385 Q9Y385 264 278 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 3 1.0203E-08 103.71 By MS/MS By MS/MS 1 1 9878900 5727100 4151800 1891 1504 2016 4231;4232 3422;3423 3422 1846;1847;2243 2 RMSDEFVDSFKK QRYGRELRRMSDEFVD EFVDSFKKGLPRPKSA R R M K K G 0 1 0 2 0 0 1 0 0 0 0 2 1 2 0 2 0 0 0 1 0 0 12 2 1487.7079 F5H3B1;F5H1R6;Q92934 F5H3B1 31 42 BAD Bcl2-associated agonist of cell death yes no 3 0.0045126 56.793 By matching By MS/MS 1 1 1406900 833280 573610 1892 495 2017 4233;4234 3424 3424 83 585 1 RMSGEPIQTVESIR GYHSASNRRMSGEPIQ IQTVESIRVPGKGNRG R R M I R V 0 2 0 0 0 1 2 1 0 2 0 0 1 0 1 2 1 0 0 1 0 0 14 1 1601.8195 Q5VT52 Q5VT52 1097 1110 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.0053613 43.955 By MS/MS By matching 1 1 598210 352190 246010 1893 1176 2018 4235;4236 3425 3425 213 1385 1 RNEGVVGGEDYEEVDR SYAPRHSRRNEGVVGG EDYEEVDRYSRQGRVA R R N D R Y 0 2 1 2 0 0 4 3 0 0 0 0 0 0 0 0 0 0 1 3 0 0 16 1 1821.8129 H3BQQ2;Q86UK7 H3BQQ2 241 256 ZNF598 Zinc finger protein 598 yes no 2;3 0.0011864 65.805 By MS/MS By MS/MS 2 2 9611300 5912800 3698500 1894 655 2019 4237;4238;4239;4240 3426;3427 3427 2364 2 RNEGVVGGEDYEEVDRYSR SYAPRHSRRNEGVVGG EEVDRYSRQGRVARAG R R N S R Q 0 3 1 2 0 0 4 3 0 0 0 0 0 0 0 1 0 0 2 3 0 0 19 2 2228.0094 H3BQQ2;Q86UK7 H3BQQ2 241 259 ZNF598 Zinc finger protein 598 yes no 3 0.0029271 56.215 By matching By MS/MS 1 1 11113000 6692400 4420800 1895 655 2020 4241;4242 3428 3428 2364 1 RNSCNVGGGGGGFK PGGGGGKRRNSCNVGG GGGGGGFKHPAFKRRR R R N F K H 0 1 2 0 1 0 0 6 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1365.6208 Q7L2J0 Q7L2J0 150 163 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 7.7541E-12 109.1 By MS/MS By MS/MS 1 1 4530900 2921400 1609500 1896 1215 2021 4243;4244 3429;3430 3429 1424 2 RNSFTPLSSSNTIR NQTPVRMRRNSFTPLS LSSSNTIRRPRNYSVG R R N I R R 0 2 2 0 0 0 0 0 0 1 1 0 0 1 1 4 2 0 0 0 0 0 14 1 1578.8114 O60825 O60825 464 477 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 3 0.0055084 64.313 By MS/MS By MS/MS 1 1 1857800 1035700 822110 1897 794 2022 4245;4246 3431;3432 3431 929;2078 2 RNSLTGEEGQLAR PRRAGALRRNSLTGEE GEEGQLARVSNWPLYC R R N A R V 1 2 1 0 0 1 2 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 13 1 1429.7274 Q9BX95 Q9BX95 110 122 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 3 9.6598E-10 122.5 By MS/MS By MS/MS 1 1 3098400 1562600 1535800 1898 1375 2023 4247;4248 3433;3434 3433 2216 2 RNSSEASSGDFLDLK LESSGLQRRNSSEASS SGDFLDLKGEGDIHEN R R N L K G 1 1 1 2 0 0 1 1 0 0 2 1 0 1 0 4 0 0 0 0 0 0 15 1 1624.7693 J3KSH8;J3KT51;Q9UK76 J3KSH8 39 53 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 3 1.3078E-12 109.42 By matching By MS/MS 1 1 12565000 4488300 8077100 1899 711 2024 4249;4250 3435 3435 837 1 RNSTTFPSR QAEAPSARRNSTTFPS NSTTFPSRHGLLLPAS R R N S R H 0 2 1 0 0 0 0 0 0 0 0 0 0 1 1 2 2 0 0 0 0 0 9 1 1064.5363 Q96E09 Q96E09 60 68 FAM122A Protein FAM122A yes yes 2 0.0017577 95.483 By MS/MS By MS/MS 1 1 3703600 2140700 1562800 1900 1327 2025 4251;4252 3436;3437 3436 1564 2 RPAEATSSPTSPERPR KKKDKEHRRPAEATSS PTSPERPRHHHHDSDS R R P P R H 2 3 0 0 0 0 2 0 0 0 0 0 0 0 4 3 2 0 0 0 0 0 16 2 1737.8758 Q9BU76 Q9BU76 210 225 MMTAG2 Multiple myeloma tumor-associated protein 2 yes yes 3 0.0042708 47.618 By MS/MS By matching 1 1 5314700 2164000 3150700 1901 1365 2026 4253;4254 3438 3438 1630;2212 1 RPAPAVSPGSWK PAVSPEPRRPAPAVSP AVSPGSWKPGPPGSPR R R P W K P 2 1 0 0 0 0 0 1 0 0 0 1 0 0 3 2 0 1 0 1 0 0 12 1 1251.6724 Q96JM3 Q96JM3 302 313 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.020136 55.196 By matching By MS/MS 1 1 2921800 1484500 1437300 1902 1338 2027 4255;4256 3439 3439 1 RPASVSSSAAVEHEQR PTDLGAHKRPASVSSS AAVEHEQREAAAKEKQ K R P Q R E 3 2 0 0 0 1 2 0 1 0 0 0 0 0 1 4 0 0 0 2 0 0 16 1 1709.8445 Q7Z5L9 Q7Z5L9 237 252 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.0031235 71.685 By MS/MS By MS/MS 1 1 9053400 6269200 2784200 1903 1223 2028 4257;4258 3440;3441 3440 1436 2 RPATADSPKPSAK PPPRASSKRPATADSP DSPKPSAKKQKKSSSK K R P A K K 3 1 0 1 0 0 0 0 0 0 0 2 0 0 3 2 1 0 0 0 0 0 13 2 1324.7099 Q03111 Q03111 286 298 MLLT1 Protein ENL yes yes 3 0.0060322 67.846 By matching By MS/MS 1 1 6522900 3623500 2899400 1904 1046 2029 4259;4260 3442 3442 1196 1 RPCFSALEVDETYVPK CTESLVNRRPCFSALE VDETYVPKEFNAETFT R R P P K E 1 1 0 1 1 0 2 0 0 0 1 1 0 1 2 1 1 0 1 2 0 0 16 1 1909.9244 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 509 524 ALB Serum albumin yes no 3 7.7981E-06 86.548 By MS/MS By MS/MS 1 1 2212100 1219000 993110 + 1905 152 2030 4261;4262 3443;3444 3444 2 RPDDVPLSLSPSKR RARLAALKRPDDVPLS LSLSPSKRACASPSAQ K R P K R A 0 2 0 2 0 0 0 0 0 0 2 1 0 0 3 3 0 0 0 1 0 0 14 2 1565.8526 F8WDB4;Q9UFC0 F8WDB4 82 95 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 0.006148 60.561 By MS/MS By matching 1 1 3887500 2486500 1401100 1906 539 2031 4263;4264 3445 3445 634 1 RPDPDSDEDEDYER HEASGFARRPDPDSDE DEDEDYERERRKRSMG R R P E R E 0 2 0 5 0 0 3 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 14 1 1736.6762 Q5W011;Q5W010;H0Y6J6;Q5W012;Q96I25 Q5W011 150 163 RBM17 Splicing factor 45 yes no 2 2.0416E-13 127.3 By MS/MS By MS/MS 1 1 13059000 7227400 5831900 1907 595 2032 4265;4266 3446;3447 3447 715 2 RPDPDSDEDEDYERER HEASGFARRPDPDSDE DEDYERERRKRSMGGA R R P E R R 0 3 0 5 0 0 4 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 16 2 2021.8199 Q5W011;Q5W010;H0Y6J6;Q5W012;Q96I25 Q5W011 150 165 RBM17 Splicing factor 45 yes no 3 0.0028111 67.136 By MS/MS By MS/MS 1 1 23180000 14180000 9000500 1908 595 2033 4267;4268 3448;3449 3448 715 2 RPEGPGAQAPSSPR LTDSGPERRPEGPGAQ AQAPSSPRVTEAPCYP R R P P R V 2 2 0 0 0 1 1 2 0 0 0 0 0 0 4 2 0 0 0 0 0 0 14 1 1405.7062 P40222 P40222 504 517 TXLNA Alpha-taxilin yes yes 2;3 2.8534E-07 103.79 By MS/MS By MS/MS 2 2 39948000 21812000 18136000 1909 955 2034 4269;4270;4271;4272 3450;3451;3452;3453 3453 1074;1075 4 RPESPSEISPIK TWNSQFGKRPESPSEI PSEISPIKGSVRTGLF K R P I K G 0 1 0 0 0 0 2 0 0 2 0 1 0 0 3 3 0 0 0 0 0 0 12 1 1338.7143 Q7Z5K2 Q7Z5K2 218 229 WAPAL Wings apart-like protein homolog yes yes 2 0.01052 66.023 By MS/MS By MS/MS 1 1 3215300 1866700 1348700 1910 1222 2035 4273;4274 3454;3455 3454 1433 2 RPGFSPTSHR FQPSSPTRRPGFSPTS GFSPTSHRLLPTP___ R R P H R L 0 2 0 0 0 0 0 1 1 0 0 0 0 1 2 2 1 0 0 0 0 0 10 1 1140.5788 H0Y4Q6;Q8WUA4 H0Y4Q6 406 415 GTF3C2 General transcription factor 3C polypeptide 2 yes no 3 0.00045662 93.348 By MS/MS By matching 1 1 2224600 1362800 861760 1911 586 2036 4275;4276 3456 3456 702 1 RPGPGTLYDVPR YDVPPGLRRPGPGTLY GTLYDVPRERVLPPEV R R P P R E 0 2 0 1 0 0 0 2 0 0 1 0 0 0 3 0 1 0 1 1 0 0 12 1 1326.7044 H3BN62;P56945 H3BN62 208 219 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 2 0.0016321 79.986 By matching By MS/MS 1 1 3309700 1993200 1316500 1912 638 2037 4277;4278 3457 3457 2361 1 RPMEEDGEEKSPSK TYAITPMKRPMEEDGE GEEKSPSKKKKKIQKK K R P S K K 0 1 0 1 0 0 4 1 0 0 0 2 1 0 2 2 0 0 0 0 0 0 14 2 1617.7305 Q12906 Q12906 372 385 ILF3 Interleukin enhancer-binding factor 3 yes yes 2;3 2.904E-07 103.3 By MS/MS By MS/MS 3 4 64496000 33457000 31039000 1913 1071 2038;2039 4279;4280;4281;4282;4283;4284;4285 3458;3459;3460;3461;3462;3463;3464 3461 194 1230 7 RPMSSPEMK SGTKPANKRPMSSPEM PMSSPEMKSAPKKSKA K R P M K S 0 1 0 0 0 0 1 0 0 0 0 1 2 0 2 2 0 0 0 0 0 0 9 1 1061.4998 A6NEM2;P51610;H7C1C4 A6NEM2 2061 2069 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.0030502 115.91 By MS/MS By MS/MS 2 2 6245700 3229600 3016100 1914 230 2040;2041 4286;4287;4288;4289 3465;3466;3467 3465 37 283;284 3 RPNEDSDEDEEK AVLTKAVKRPNEDSDE DSDEDEEKGAVVPPVH K R P E K G 0 1 1 3 0 0 4 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 12 1 1461.5856 H0YE74;Q12996 H0YE74 60 71 CSTF3 Cleavage stimulation factor subunit 3 yes no 2 0.0070037 70.628 By MS/MS By MS/MS 1 1 2322000 1181000 1140900 1915 614 2042 4290;4291 3468;3469 3469 735 2 RPNEDSDEDEEKGAVVPPVHDIYR AVLTKAVKRPNEDSDE PPVHDIYRARQQKRIR K R P Y R A 1 2 1 4 0 0 4 1 1 1 0 1 0 0 3 1 0 0 1 3 0 0 24 2 2765.2893 H0YE74;Q12996 H0YE74 60 83 CSTF3 Cleavage stimulation factor subunit 3 yes no 4 2.3712E-08 79.455 By MS/MS By MS/MS 1 1 20880000 12640000 8239700 1916 614 2043 4292;4293 3470;3471 3471 735 2 RPPSPDVIVLSDNEQPSSPR HSDMKSERRPPSPDVI NEQPSSPRVNGLTTVA R R P P R V 0 2 1 2 0 1 1 0 0 1 1 0 0 0 5 4 0 0 0 2 0 0 20 1 2189.1077 Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4 97 116 GATAD2A Transcriptional repressor p66-alpha yes no 3 0.0012068 64.16 By MS/MS By MS/MS 1 1 5453700 2708600 2745100 1917 1237 2044 4294;4295 3472;3473;3474 3474 1458;1459;1460 3 RPPSPEPSTK QEEEERKRRPPSPEPS PSPEPSTKVSEEAESQ R R P T K V 0 1 0 0 0 0 1 0 0 0 0 1 0 0 4 2 1 0 0 0 0 0 10 1 1094.572 A0A087WUZ3;Q01082 A0A087WUZ3 2101 2110 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 1.6457E-06 139.76 By MS/MS By MS/MS 1 1 15393000 9026600 6366300 1918 32 2045 4296;4297 3475;3476;3477;3478;3479 3476 40;41 5 RPPTPCSDPER LDLTKKGKRPPTPCSD TPCSDPERKRFRFNSE K R P E R K 0 2 0 1 1 0 1 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 11 1 1310.6037 Q9BW71 Q9BW71 81 91 HIRIP3 HIRA-interacting protein 3 yes yes 2 0.0035071 76.358 By MS/MS By matching 2 2 5703000 3337400 2365600 1919 1372 2046;2047 4298;4299;4300;4301 3480;3481 3481 1634;2215 2 RPRDSPTLSNSGIR ERVVERRRRPRDSPTL TLSNSGIRATSRTAKQ R R P I R A 0 3 1 1 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 0 0 0 14 2 1554.8227 Q9HD20 Q9HD20 895 908 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 3 0.006651 59.796 By MS/MS 1 359410 359410 0 1920 1412 2048 4302 3482 3482 1707 1 RPSPQPSPR SYSPVERRRPSPQPSP PSPQPSPRDQQSSSSE R R P P R D 0 2 0 0 0 1 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 9 1 1020.5465 Q9UQ35;I3L4U6 Q9UQ35 2700 2708 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 0.0012748 109.11 By MS/MS By MS/MS 1 2 8439200 4682700 3756500 1921 1487 2049 4303;4304;4305 3483;3484 3483 1809 2 RPSQEQSASASSGQPQAPLNR EKAEERPRRPSQEQSA QPQAPLNRERPESPMV R R P N R E 3 2 1 0 0 4 1 1 0 0 1 0 0 0 3 5 0 0 0 0 0 0 21 1 2195.0679 A0A0A0MT60;Q5T1M5 A0A0A0MT60 979 999 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 3 0.006062 67.252 By matching By MS/MS 1 1 5362100 3108300 2253800 1922 127 2050 4306;4307 3485 3485 155 1 RPSVGSQSNQAGQGK PGVFLTQRRPSVGSQS SNQAGQGKRPKKGLAT R R P G K R 1 1 1 0 0 3 0 3 0 0 0 1 0 0 1 3 0 0 0 1 0 0 15 1 1499.7441 H0Y3N9;Q9UPP1 H0Y3N9 887 901 PHF8 Histone lysine demethylase PHF8 yes no 2 0.0029226 61.097 By MS/MS By MS/MS 1 1 1944800 1423800 520900 1923 582 2051 4308;4309 3486;3487 3487 698 1 RQLQEDQENNLQDNQTSNSSPCR ESKEKTLKRQLQEDQE TSNSSPCRSNVGKGNI K R Q C R S 0 2 4 2 1 5 2 0 0 0 2 0 0 0 1 3 1 0 0 0 0 0 23 1 2760.2118 Q92576 Q92576 1595 1617 PHF3 PHD finger protein 3 yes yes 3 0.015463 46.178 By MS/MS 1 690880 690880 0 1924 1303 2052 4310 3488 3488 1 RQSIPEEFK PDGALAVRRQSIPEEF QSIPEEFKGSTVVELM R R Q F K G 0 1 0 0 0 1 2 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 9 1 1132.5877 F5H3G9;F5H4N6;Q9Y3R0 F5H3G9 67 75 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.0092108 77.597 By MS/MS By MS/MS 1 1 2716400 1498600 1217800 1925 498 2053 4311;4312 3489;3490 3490 588 2 RQSPEPSPVTLGR ESKRRCRKRQSPEPSP PSPVTLGRRSSGRQGG K R Q G R R 0 2 0 0 0 1 1 1 0 0 1 0 0 0 3 2 1 0 0 1 0 0 13 1 1422.7579 Q9NRL2 Q9NRL2 1411 1423 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 3 0.0042145 73.279 By matching By MS/MS 1 1 1194500 745020 449520 1926 1419 2054 4313;4314 3491 3491 1719 1 RQSPLPPQK ________________ QSPLPPQKKKPRPPPA K R Q Q K K 0 1 0 0 0 2 0 0 0 0 1 1 0 0 3 1 0 0 0 0 0 0 9 1 1049.5982 Q01105;B2REB7 Q01105 5 13 SET Protein SET yes no 2 0.00028826 101.35 By MS/MS By matching 1 1 5358700 2668600 2690100 1927 1037 2055 4315;4316 3492;3493 3492 1179 2 RQSPSPSTRPIR GASSSPQRRQSPSPST SPSTRPIRRVSRTPEP R R Q I R R 0 3 0 0 0 1 0 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 12 2 1380.7586 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 720 731 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.00045402 95.57 By MS/MS By MS/MS 1 1 7840700 4037900 3802800 1928 247 2056 4317;4318 3494;3495 3495 311;312 2 RQSSGSATNVASTPDNR SLGRIRTRRQSSGSAT VASTPDNRGRSRAKVV R R Q N R G 2 2 2 1 0 1 0 1 0 0 0 0 0 0 1 4 2 0 0 1 0 0 17 1 1746.8245 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 425 441 CLASP1 CLIP-associating protein 1 yes no 2 1.9815E-06 94.402 By MS/MS By matching 1 1 4043400 2363900 1679500 1929 532 2057 4319;4320 3496 3496 620 1 RQYHFESNQR AEYIAQARRQYHFESN YHFESNQRTCNMTVLS R R Q Q R T 0 2 1 0 0 2 1 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 10 1 1363.6381 P56589 P56589 54 63 PEX3 Peroxisomal biogenesis factor 3 yes yes 2 0.013275 42.287 By MS/MS 1 11162000 0 11162000 1930 1013 2058 4321 3497 3497 2434 1 RRDSDGVDGFEAEGK NIHNNRKRRRDSDGVD DGFEAEGKKDKKDYDN R R R G K K 1 2 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 15 2 1636.7441 Q96KR1 Q96KR1 1051 1065 ZFR Zinc finger RNA-binding protein yes yes 3 0.0021566 73.76 By MS/MS By matching 1 1 9283300 5137200 4146200 1931 1340 2059 4322;4323 3498 3498 1589 1 RRSPGLCSDSLEK HPGDSGSRRRSPGLCS LCSDSLEKSLRITVGN R R R E K S 0 2 0 1 1 0 1 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 13 2 1503.7464 Q5VUA4 Q5VUA4 134 146 ZNF318 Zinc finger protein 318 yes yes 3 0.016175 54.524 By MS/MS By matching 1 1 3082900 1855200 1227700 1932 1177 2060 4324;4325 3499 3499 1 RRSPPPGPDGHAK QQLEKKQRRRSPPPGP PGPDGHAKKMRPGEAT R R R A K K 1 2 0 1 0 0 0 2 1 0 0 1 0 0 4 1 0 0 0 0 0 0 13 2 1370.7167 P57081 P57081 389 401 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 3 0.011405 58.04 By MS/MS By MS/MS 2 2 3647800 1668900 1978900 1933 1014 2061 4326;4327;4328;4329 3500;3501 3500 1160 1 RRSPSLSSK QRSSPVTKRRSPSLSS RSPSLSSKHRKGSSPS K R R S K H 0 2 0 0 0 0 0 0 0 0 1 1 0 0 1 4 0 0 0 0 0 0 9 2 1016.5727 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 660 668 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.013578 54.471 By MS/MS By matching 1 1 9520200 4968000 4552200 1934 247 2062 4330;4331 3502 3502 1 RRSPSPYYSR DYYSRSYRRRSPSPYY SPSPYYSRGGYRSRSR R R R S R G 0 3 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 2 0 0 0 10 2 1267.6422 H7BXF3;Q13595;P62995 H7BXF3 101 110 TRA2B;TRA2A Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta yes no 2;3 0.0031802 67.252 By MS/MS By MS/MS 2 2 21101000 12850000 8251100 1935 668 2063 4332;4333;4334;4335 3503;3504;3505 3505 790;791 3 RSALQSINEWAAQTTDGK SKINFRDKRSALQSIN AAQTTDGKLPEVTKDV K R S G K L 3 1 1 1 0 2 1 1 0 1 1 1 0 0 0 2 2 1 0 0 0 0 18 1 1974.9759 P50454;E9PQ34;E9PNX1;E9PK86;E9PMI5;E9PR70;E9PPV6 P50454 167 184 SERPINH1 Serpin H1 yes no 2 0.016755 44.564 By MS/MS 1 0 0 0 1936 988 2064 4336 3506 3506 1 RSASASHQADIK GRPPKSARRSASASHQ ASHQADIKEARREVEV R R S I K E 3 1 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 12 1 1269.6426 C9JXK0;Q14739 C9JXK0 96 107 LBR Lamin-B receptor yes no 3 0.011508 64.675 By matching By MS/MS 1 1 22608000 13824000 8784500 1937 344 2065 4337;4338 3507 3507 408;409;410 1 RSASASHQADIKEAR GRPPKSARRSASASHQ QADIKEARREVEVKLT R R S A R R 4 2 0 1 0 1 1 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 15 2 1625.8234 C9JXK0;Q14739 C9JXK0 96 110 LBR Lamin-B receptor yes no 4 0.008963 41.115 By matching By MS/MS 1 1 5416000 1402200 4013800 1938 344 2066 4339;4340 3508 3508 408;409;410 1 RSDSASSEPVGIYQGFEKK QVTQRASRRSDSASSE IYQGFEKKTGVAGEDM R R S K K T 1 1 0 1 0 1 2 2 0 1 0 2 0 1 1 4 0 0 1 1 0 0 19 2 2084.0174 Q05655 Q05655 301 319 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 3 0.0011747 58.712 By MS/MS 1 435980 0 435980 1939 1052 2067 4341 3509 3509 1205;1206;1207;1208;2440 1 RSDSPENKYSDSTGHSK SPPNKMLRRSDSPENK SDSTGHSKAKNV____ R R S S K A 0 1 1 2 0 0 1 1 1 0 0 2 0 0 1 5 1 0 1 0 0 0 17 2 1893.8453 E9PMZ7;C9JMU2;C9JVK6;C9JD58;J3QTA0;A0A0A0MRT2;Q9BTA9 E9PMZ7 16 32 WAC WW domain-containing adapter protein with coiled-coil yes no 4 0.0019057 52.273 By matching By MS/MS 1 1 1603000 403220 1199700 1940 110 2068 4342;4343 3510 3510 138 1 RSEACPCQPDSGSPLPAEEEKR MKRSIEGRRSEACPCQ LPAEEEKRLSAESGLS R R S K R L 2 2 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 22 2 2499.1118 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 411 432 SCRIB Protein scribble homolog yes no 3 0.0027208 56.428 By MS/MS By matching 1 1 3531000 2717200 813820 1941 178 2069 4344;4345 3511 3511 226;227 1 RSESSGILPNTTDMR LQTHPPCRRSESSGIL LPNTTDMRLRPGTRRD R R S M R L 0 2 1 1 0 0 1 1 0 1 1 0 1 0 1 3 2 0 0 0 0 0 15 1 1662.7995 Q92667;I3L2A2;I3L2N7;I3L0K6 Q92667 104 118 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 3 0.013278 47.088 By MS/MS 1 0 0 0 1942 1307 2070 4346 3512 3512 225 1540;1541 1 RSFSKEVEER RARTPATKRSFSKEVE FSKEVEERSRERPSQP K R S E R S 0 2 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 10 2 1265.6364 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1021 1030 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 0.0014313 87.831 By MS/MS By matching 1 1 6320900 3223500 3097300 1943 426 2071 4347;4348 3513 3513 494;495 1 RSLTNSHLEK FISDRESRRSLTNSHL LTNSHLEKKKCDEYIP R R S E K K 0 1 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 10 1 1183.6309 F8VX12;F8VX04;Q9H2H9 F8VX12 51 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 3 0.00071663 80.905 By MS/MS By MS/MS 1 2 6478700 2878000 3600600 1944 522 2072 4349;4350;4351 3514;3515 3514 611;612;2015 2 RSPATYGHSQK SRIQNAAKRSPATYGH ATYGHSQKKHKCSVYY K R S Q K K 1 1 0 0 0 1 0 1 1 0 0 1 0 0 1 2 1 0 1 0 0 0 11 1 1230.6105 H0Y2M0;A2VDJ0 H0Y2M0 744 754 KIAA0922 Transmembrane protein 131-like yes no 2 0.0040356 66.267 By matching By MS/MS 1 1 4068700 260100 3808600 1945 227 2073 4352;4353 3516 3516 19 281 1 RSSLLNAK GAHKKRARRSSLLNAK RSSLLNAKKLYEDAQM R R S A K K 1 1 1 0 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 8 1 887.51886 B7Z7Y1;E9PCH4;Q8TEU7;D6RE77 B7Z7Y1 1092 1099 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 2 0.014854 110.84 By MS/MS By matching 1 1 2651600 1432600 1218900 1946 290 2074 4354;4355 3517 3517 1 RSSPESDRQVHSR DSRSHSSRRSSPESDR SDRQVHSRSGSFDSRD R R S S R S 0 3 0 1 0 1 1 0 1 0 0 0 0 0 1 4 0 0 0 1 0 0 13 2 1539.7502 Q5T200 Q5T200 1277 1289 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 4 0.001779 59.265 By matching By MS/MS 1 1 811620 199040 612590 1947 1167 2075 4356;4357 3518 3518 1370 1 RSSTSSEPTPTVK RQGMGLSRRSSTSSEP SEPTPTVKTLIKSFDS R R S V K T 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 4 3 0 0 1 0 0 13 1 1375.6943 F8WAN1;Q69YQ0 F8WAN1 830 842 SPECC1L-ADORA2A;SPECC1L Cytospin-A yes no 2 0.0036403 80.312 By MS/MS By MS/MS 2 2 4645300 2301800 2343500 1948 534 2076 4358;4359;4360;4361 3519;3520;3521 3519 625;2016 3 RSTQESLTAGGTDLKR APATRVTRRSTQESLT AGGTDLKRELHPPATS R R S K R E 1 2 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 16 2 1718.8911 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 303 318 LRRC41 Leucine-rich repeat-containing protein 41 yes no 3 1.1022E-19 119 By MS/MS By MS/MS 1 1 3360000 1708400 1651600 1949 21 2077 4362;4363 3522;3523 3522 19;1891 2 RSTSPIIGSPPVR LSERALPRRSTSPIIG IIGSPPVRAVPIGTPP R R S V R A 0 2 0 0 0 0 0 1 0 2 0 0 0 0 3 3 1 0 0 1 0 0 13 1 1365.7728 Q86TB9 Q86TB9 176 188 PATL1 Protein PAT1 homolog 1 yes yes 2 0.0063468 55.011 By MS/MS By matching 1 1 1810700 1611700 198940 1950 1228 2078 4364;4365 3524 3524 1442;1443;2187 1 RSTSTLYSQFQTAESENR SGSRQAARRSTSTLYS QTAESENRSYEGTLYK R R S N R S 1 2 1 0 0 2 2 0 0 0 1 0 0 1 0 4 3 0 1 0 0 0 18 1 2103.9821 G5E933;O95248;H0Y5W8 G5E933 1746 1763 SBF1 Myotubularin-related protein 5 yes no 3 0.0043375 47.223 By MS/MS 1 399090 399090 0 1951 571 2079 4366 3525 3525 2028 1 RSWLTVLLPTRPAEDWPSK LYRSWKDKRSWLTVLL PAEDWPSKVPGLPSPQ K R S S K V 1 2 0 1 0 0 1 0 0 0 3 1 0 0 3 2 2 2 0 1 0 0 19 2 2251.2113 A0A0U1RQB7 A0A0U1RQB7 18 36 yes yes 4 0.008307 40.493 By MS/MS 1 1349900 1349900 0 1952 193 2080 4367 3526 3526 243 1 RSYLTPVRDEESESQR TTEVRERRRSYLTPVR DEESESQRKARSRQAR R R S Q R K 0 3 0 1 0 1 3 0 0 0 1 0 0 0 1 3 1 0 1 1 0 0 16 2 1950.9395 O14974;H0YIS4;H0YHI8 O14974 667 682 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.017105 42.556 By MS/MS 1 0 0 0 1953 765 2081 4368 3527 3527 2383 1 RTDALTSSPGR SSPGRSSRRTDALTSS ALTSSPGRDLPPFEDE R R T G R D 1 2 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 11 1 1159.5945 P49736;C9J013;C9JZ21;F8WDM3 P49736 34 44 MCM2 DNA replication licensing factor MCM2 yes no 2 0.018658 59.248 By matching By MS/MS 1 1 7708400 4141200 3567200 1954 978 2082 4369;4370 3528 3528 2131 1 RTGLQCETGK QQEVDEERRTGLQCET GLQCETGKRHSIKELE R R T G K R 0 1 0 0 1 1 1 2 0 0 1 1 0 0 0 0 2 0 0 0 0 0 10 1 1148.5608 H7C3M9;Q86W67 H7C3M9 114 123 FAM228A Protein FAM228A yes no 2 0.0065231 56.551 By MS/MS 1 0 0 0 1955 680 2083 4371 3529 3529 2054 1 RTLFAIFK LVFTDLQRRTLFAIFK RTLFAIFKENKRPSKE R R T F K E 1 1 0 0 0 0 0 0 0 1 1 1 0 2 0 0 1 0 0 0 0 0 8 1 994.59639 O95948 O95948 439 446 ONECUT2 One cut domain family member 2 yes yes 1 0.012782 41.502 By matching By MS/MS 1 1 9244500 4597000 4647500 1956 827 2084 4372;4373 3530 3530 1 RTPSDDEEDNLFAPPK TLKEKKERRTPSDDEE DNLFAPPKLTDEDFSP R R T P K L 1 1 1 3 0 0 2 0 0 0 1 1 0 1 3 1 1 0 0 0 0 0 16 1 1829.8432 F8W7U3;J3KP36;E7ESD2;A0A0A0MR88;A0A096LPC5;Q9Y4E1;Q641Q2 F8W7U3 242 257 FAM21A;FAM21C WASH complex subunit FAM21C;WASH complex subunit FAM21A yes no 3 0.0056844 45.207 By MS/MS By matching 1 1 748480 374210 374270 1957 89 2085 4374;4375 3531 3531 1909 1 RTSFSTSDVSK ALTPTEERRTSFSTSD FSTSDVSKLLPSLAKA R R T S K L 0 1 0 1 0 0 0 0 0 0 0 1 0 1 0 4 2 0 0 1 0 0 11 1 1213.5939 M0R300;M0R0P8;Q13459 M0R300 1352 1362 MYO9B Unconventional myosin-IXb yes no 2 0.01358 64.827 By matching By MS/MS 1 2 4039100 2013000 2026100 1958 747 2086 4376;4377;4378 3532 3532 1 RTSMGGTQQQFVEGVR RAHQDTQRRTSMGGTQ QQFVEGVRMEEIVEGC R R T V R M 0 2 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 16 1 1779.8686 B4DGU4;P35222 B4DGU4 543 558 CTNNB1 Catenin beta-1 yes no 3 7.1536E-20 125.51 By MS/MS By MS/MS 1 2 4797600 1640300 3157200 1959 264 2087;2088 4379;4380;4381 3533;3534;3535 3534 47 333;1950 3 RTSPQVLGSILK PKAYELEKRTSPQVLG QVLGSILKSGTTSESG K R T L K S 0 1 0 0 0 1 0 1 0 1 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1297.7718 Q7Z417 Q7Z417 570 581 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0023461 82.831 By MS/MS By matching 1 1 1906700 1334900 571810 1960 1219 2089 4382;4383 3536 3536 1430 1 RVNDAEPGSPEAPQGK RRRPRRRRRVNDAEPG SPEAPQGKRRKADGED R R V G K R 2 1 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 16 1 1650.7962 Q8N8A6 Q8N8A6 75 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 2;3 0.0028656 65.225 By MS/MS By MS/MS 2 2 5742100 3454900 2287200 1961 1261 2090 4384;4385;4386;4387 3537;3538;3539 3539 1487 3 RVNNGNTAPEDSSPAKK ARALNESKRVNNGNTA EDSSPAKKTRRCQRQE K R V K K T 2 1 3 1 0 0 1 1 0 0 0 2 0 0 2 2 1 0 0 1 0 0 17 2 1783.8813 E9PJ27;G3V167;Q9UGN5 E9PJ27 22 38 PARP2 Poly [ADP-ribose] polymerase 2 yes no 3 0.0017456 58.159 By MS/MS By MS/MS 1 2 2933600 1190800 1742800 1962 453 2091;2092 4388;4389;4390 3540;3541;3542 3542 527;528 3 RVPCAYDK VFAKAIQKRVPCAYDK RVPCAYDKTALALEVG K R V D K T 1 1 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 8 1 1007.4859 P46109 P46109 246 253 CRKL Crk-like protein yes yes 2 0.018425 45.972 By MS/MS 1 0 0 0 1963 967 2093 4391 3543 3543 2414 1 RVPSPTPAPK VQPEVALKRVPSPTPA PSPTPAPKEAVREGRP K R V P K E 1 1 0 0 0 0 0 0 0 0 0 1 0 0 4 1 1 0 0 1 0 0 10 1 1048.6029 Q9UQ35 Q9UQ35 2578 2587 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.00072755 115.29 By MS/MS By MS/MS 2 2 26661000 14102000 12560000 1964 1487 2094 4392;4393;4394;4395 3544;3545;3546 3546 2235 3 RVPSPTPAPKEAVR VQPEVALKRVPSPTPA PAPKEAVREGRPPEPT K R V V R E 2 2 0 0 0 0 1 0 0 0 0 1 0 0 4 1 1 0 0 2 0 0 14 2 1503.8522 Q9UQ35 Q9UQ35 2578 2591 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.011354 41.996 By matching By MS/MS 1 1 1809100 993740 815320 1965 1487 2095 4396;4397 3547 3547 2235 1 RVSEVEEEKEPVPQPLPSDDTR RLRGRGRRRVSEVEEE PLPSDDTRVENMDISD R R V T R V 0 2 0 2 0 1 5 0 0 0 1 1 0 0 4 2 1 0 0 3 0 0 22 2 2535.2453 O43290 O43290 446 467 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 3 1.3344E-07 84.89 By MS/MS By MS/MS 1 1 10626000 5772200 4854000 1966 779 2096 4398;4399 3548;3549 3549 906 2 RVSLEPHQGPGTPESK ITTRQQRKRVSLEPHQ GPGTPESKKATSCFPR K R V S K K 0 1 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 16 1 1717.8747 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1973 1988 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0056174 45.347 By MS/MS By MS/MS 1 1 1458100 918450 539650 1967 55 2097 4400;4401 3550;3551 3550 1904 2 RVSLSEIGFGK KPLSRRLRRVSLSEIG LSEIGFGKLETYIKLD R R V G K L 0 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 1 0 0 11 1 1191.6612 H0YBX5;E5RJM2;E5RGN0;A0A087WZU2;Q00536 H0YBX5 111 121 CDK16 Cyclin-dependent kinase 16 yes no 2 5.0075E-05 124.81 By MS/MS By MS/MS 1 1 3724100 2105000 1619000 1968 64 2098 4402;4403 3552;3553 3552 71 2 RVSLVGADDLR PQAEGPPKRVSLVGAD LVGADDLRKMQEEEAR K R V L R K 1 2 0 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 11 1 1199.6622 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1295 1305 SCRIB Protein scribble homolog yes no 2 0.0034583 80.371 By MS/MS By matching 1 1 11016000 6174100 4841700 1969 178 2099 4404;4405 3554 3554 228 1 RVSVCAETYNPDEEEEDTDPR PVPSRFNRRVSVCAET EEEDTDPRVIHPKTDE R R V P R V 1 2 1 3 1 0 5 0 0 0 0 0 0 0 2 1 2 0 1 2 0 0 21 1 2510.0503 P13861 P13861 97 117 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 3 0.0010909 76.55 By matching By MS/MS 1 1 36858000 21425000 15433000 1970 899 2100 4406;4407 3555 3555 1021 1 RVTQEQGVSLLEDK SALREPSRRVTQEQGV GVSLLEDKKESREDET R R V D K K 0 1 0 1 0 2 2 1 0 0 2 1 0 0 0 1 1 0 0 2 0 0 14 1 1600.842 M0R300;M0R0P8;Q13459 M0R300 1181 1194 MYO9B Unconventional myosin-IXb no no 1 NaN 0 0 0 1971 747 0 RWDQTADQTPGATPK QPPSKRKRRWDQTADQ QTPGATPKKLSSWDQA R R W P K K 2 1 0 2 0 2 0 1 0 0 0 1 0 0 2 0 3 1 0 0 0 0 15 1 1670.8012 O75533 O75533 199 213 SF3B1 Splicing factor 3B subunit 1 yes yes 2;3 0.0019215 50.722 By matching By MS/MS 1 2 4235200 1285600 2949600 1972 799 2101;2102 4408;4409;4410 3556;3557 3557 2085;2086 2 RYEDDGISDDEIEGK ________________ SDDEIEGKRTFDLEEK R R Y G K R 0 1 0 4 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 0 0 0 15 1 1739.7486 I3VM54;Q9Y2K7 I3VM54 4 18 KDM2A Lysine-specific demethylase 2A yes no 2 0.0024532 62.104 By MS/MS By matching 1 1 3292300 1712900 1579300 1973 697 2103 4411;4412 3558 3558 824 1 RYPSSISSSPQK EQRSTQTRRYPSSISS SISSSPQKDLTQAKNG R R Y Q K D 0 1 0 0 0 1 0 0 0 1 0 1 0 0 2 5 0 0 1 0 0 0 12 1 1335.6783 Q14157;F8W726 Q14157 601 612 UBAP2L Ubiquitin-associated protein 2-like yes no 2 2.4501E-08 122.46 By MS/MS By MS/MS 3 3 39490000 23035000 16455000 1974 1096 2104;2105 4413;4414;4415;4416;4417;4418 3559;3560;3561 3559 1264 2 RYSPPIQR RRRSPSPRRYSPPIQR RYSPPIQRRYSPSPPP R R Y Q R R 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 8 1 1015.5563 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 604 611 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 1.5305E-07 146.11 By MS/MS By MS/MS 1 1 47299000 24029000 23270000 1975 247 2106 4419;4420 3562;3563;3564 3562 313 3 RYSPSPPPK RYSPPIQRRYSPSPPP YSPSPPPKRRTASPPP R R Y P K R 0 1 0 0 0 0 0 0 0 0 0 1 0 0 4 2 0 0 1 0 0 0 9 1 1027.5451 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 612 620 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0015983 88.101 By MS/MS By MS/MS 1 1 13052000 6428900 6623000 1976 247 2107 4421;4422 3565;3566;3567;3568;3569 3565 314;315 5 SADFTNFDPR DSIKTKGKSADFTNFD DFTNFDPRGLLPESLD K S A P R G 1 1 1 2 0 0 0 0 0 0 0 0 0 2 1 1 1 0 0 0 0 0 10 0 1168.5149 P00918 P00918 172 181 CA2 Carbonic anhydrase 2 yes yes 2 3.1664E-05 87.476 By MS/MS 1 0 0 0 1977 833 2108 4423 3570 3570 1 SADFVVEAIGDDVGTLGFSVEGPSQAK LEGGVVGKSADFVVEA VEGPSQAKIECDDKGD K S A A K I 3 0 0 3 0 1 2 4 0 1 1 1 0 2 1 3 1 0 0 4 0 0 27 0 2694.3025 A0A087WWY3;Q5HY54;Q60FE5;P21333 A0A087WWY3 567 593 FLNA Filamin-A yes no 3 3.1427E-06 66.556 By MS/MS By matching 1 1 9682700 7429900 2252700 1978 47 2109 4424;4425 3571 3571 1 SADSENALSVQER LDPRGRLRSADSENAL NALSVQERNVPTKSPS R S A E R N 2 1 1 1 0 1 2 0 0 0 1 0 0 0 0 3 0 0 0 1 0 0 13 0 1404.6481 J3KRN4;J3QRB6;Q99759 J3KRN4 333 345 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 2 0.0082026 55.176 By matching By MS/MS 1 1 1233400 525240 708180 1979 709 2110 4426;4427 3572 3572 835 1 SAEEAPLYSKVTPR TGTGTGARSAEEAPLY LYSKVTPRAQRPGAHA R S A P R A 2 1 0 0 0 0 2 0 0 0 1 1 0 0 2 2 1 0 1 1 0 0 14 1 1546.7991 E7EMB8;Q99952 E7EMB8 187 200 PTPN18 Tyrosine-protein phosphatase non-receptor type 18 yes no 3 0.0054084 56.951 By MS/MS 1 360140 0 360140 1980 399 2111 4428 3573 3573 1975 1 SAESPSWTPAEHVAK KPVRAKSKSAESPSWT TPAEHVAKRIESRHSA K S A A K R 3 0 0 0 0 0 2 0 1 0 0 1 0 0 2 3 1 1 0 1 0 0 15 0 1595.758 Q13415 Q13415 196 210 ORC1 Origin recognition complex subunit 1 yes yes 2 0.0070896 51.998 By matching By MS/MS 1 1 1064400 599410 464960 1981 1083 2112 4429;4430 3574 3574 1250 1 SAGEEEDGPVLTDEQK PSLDQWHRSAGEEEDG PVLTDEQKSRIQAMKP R S A Q K S 1 0 0 2 0 1 4 2 0 0 1 1 0 0 1 1 1 0 0 1 0 0 16 0 1702.7534 F5GYV5;H7BZV4;A0A0C4DG62;F8WCT1;F5H7X4;Q66PJ3 F5GYV5 140 155 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 2 4.9079E-06 93.106 By matching By MS/MS 1 1 19854000 10164000 9690400 1982 149 2113 4431;4432 3575 3575 185 1 SAPASPTHPGLMSPR PFGPLSSRSAPASPTH HPGLMSPRSGGLQTPE R S A P R S 2 1 0 0 0 0 0 1 1 0 1 0 1 0 4 3 1 0 0 0 0 0 15 0 1504.7456 P85037 P85037 416 430 FOXK1 Forkhead box protein K1 yes yes 2 0.001166 61.015 By MS/MS By MS/MS 1 1 6000900 2516100 3484900 1983 1034 2114 4433;4434 3576;3577 3577 1177;1178 2 SAQGSSSPVPSMVQK VLPSPSGRSAQGSSSP PVPSMVQKSPRITPPA R S A Q K S 1 0 0 0 0 2 0 1 0 0 0 1 1 0 2 5 0 0 0 2 0 0 15 0 1488.7242 P35658;A0A0A0MSW3 P35658 651 665 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.0050885 53.946 By MS/MS By matching 1 1 3969800 2010900 1958900 1984 952 2115 4435;4436 3578 3578 1070 1 SARYRGQYS FRVDLPIKSARYRGQY ARYRGQYS________ K S A Y S - 1 2 0 0 0 1 0 1 0 0 0 0 0 0 0 2 0 0 2 0 0 0 9 2 1086.5207 C9JJV4 C9JJV4 181 189 SEC61A2 yes yes 2 0.018842 41.979 By MS/MS 1 0 0 0 1985 333 2116 4437 3579 3579 2311 1 SASADNLTLPR LRRSARKRSASADNLT ADNLTLPRWSPAIIS_ R S A P R W 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 2 1 0 0 0 0 0 11 0 1143.5884 Q8ND76 Q8ND76 324 334 CCNY Cyclin-Y yes yes 2 4.8733E-06 109.16 By MS/MS By MS/MS 1 1 5523700 2872100 2651700 1986 1266 2117 4438;4439 3580;3581;3582;3583 3581 1497 4 SASASHQADIK RPPKSARRSASASHQA ASHQADIKEARREVEV R S A I K E 3 0 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1113.5415 C9JXK0;Q14739 C9JXK0 97 107 LBR Lamin-B receptor yes no 2 6.9121E-06 129.17 By MS/MS By MS/MS 1 1 19724000 12652000 7072000 1987 344 2118 4440;4441 3584;3585;3586;3587;3588 3588 408;409;410 5 SASITNLSLDR GKSPARNRSASITNLS ITNLSLDRSGSPMVPS R S A D R S 1 1 1 1 0 0 0 0 0 1 2 0 0 0 0 3 1 0 0 0 0 0 11 0 1175.6146 Q9Y2I7;E9PDH4 Q9Y2I7 305 315 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes no 2 0.0051503 67.879 By MS/MS By matching 1 1 3039300 1404400 1634900 1988 1498 2119 4442;4443 3589 3589 1831 1 SASLSNLHSLDR PKKTPPRKSASLSNLH SNLHSLDRSTREVELG K S A D R S 1 1 1 1 0 0 0 0 1 0 3 0 0 0 0 4 0 0 0 0 0 0 12 0 1298.6579 B0QY53;B0QY54;A0A087WUW0;Q9Y3M2 B0QY53 18 29 CBY1 Protein chibby homolog 1 yes no 2 0.0079201 57.434 By MS/MS By MS/MS 1 1 4575900 2010900 2564900 1989 30 2120 4444;4445 3590;3591 3591 31 2 SASPDDDLGSSNWEAADLGNEER SHPHGVKRSASPDDDL ADLGNEERKQKFLRLM R S A E R K 3 1 2 4 0 0 3 2 0 0 2 0 0 0 1 4 0 1 0 0 0 0 23 0 2434.0157 E9PQA1;E9PM92;O00193 E9PQA1 15 37 C11orf58;SMAP Small acidic protein yes no 3 0.0044556 45.395 By MS/MS By MS/MS 1 1 65549000 38737000 26812000 1990 465 2121 4446;4447 3592;3593 3592 547 2 SASPDDDLGSSNWEAADLGNEERK SHPHGVKRSASPDDDL DLGNEERKQKFLRLMG R S A R K Q 3 1 2 4 0 0 3 2 0 0 2 1 0 0 1 4 0 1 0 0 0 0 24 1 2562.1106 E9PQA1;E9PM92;O00193 E9PQA1 15 38 C11orf58;SMAP Small acidic protein yes no 3 0.0049888 51.526 By MS/MS By matching 1 1 32404000 22869000 9534800 1991 465 2122 4448;4449 3594 3594 547 1 SASQSSLDKLDQELK DTEGSKQRSASQSSLD DKLDQELKEQQKELKN R S A L K E 1 0 0 2 0 2 1 0 0 0 3 2 0 0 0 4 0 0 0 0 0 0 15 1 1647.8315 A0A087X2D8;O60271 A0A087X2D8 719 733 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2;3 0.0023238 61.444 By MS/MS By matching 3 2 10535000 5854600 4680800 1992 83 2123 4450;4451;4452;4453;4454 3595;3596;3597 3595 98;99;100 3 SASSGAEGDVSSEREP NTPRKEDRSASSGAEG DVSSEREP________ R S A E P - 2 1 0 1 0 0 3 2 0 0 0 0 0 0 1 5 0 0 0 1 0 0 16 1 1563.6649 Q8TEA8 Q8TEA8 194 209 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 2 4.1893E-05 86.548 By MS/MS By MS/MS 2 2 18913000 11030000 7883000 1993 1283 2124 4455;4456;4457;4458 3598;3599;3600;3601 3598 1515;1516;1517;1518 4 SASSGLGEFNAR CERPGRGRSASSGLGE GLGEFNARAREVELEH R S A A R A 2 1 1 0 0 0 1 2 0 0 1 0 0 1 0 3 0 0 0 0 0 0 12 0 1194.5629 Q86YS3 Q86YS3 525 536 RAB11FIP4 Rab11 family-interacting protein 4 yes yes 2 0.005708 63.966 By MS/MS By matching 1 1 1127500 756530 371000 1994 1238 2125 4459;4460 3602 3602 1461 1 SASTDLGTADVVLGR RGKRQALKSASTDLGT TADVVLGRVLEVTDLP K S A G R V 2 1 0 2 0 0 0 2 0 0 2 0 0 0 0 2 2 0 0 2 0 0 15 0 1460.7471 H7C0E9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5 H7C0E9 618 632 R3HDM2 R3H domain-containing protein 2 yes no 2 5.9872E-27 142.95 By MS/MS By MS/MS 1 1 5866700 3294400 2572300 1995 201 2126 4461;4462 3603;3604 3604 251;1936 2 SASTEKLEQGTSALIR ESKTANKRSASTEKLE QGTSALIRQMPLSSAG R S A I R Q 2 1 0 0 0 1 2 1 0 1 2 1 0 0 0 3 2 0 0 0 0 0 16 1 1689.8897 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 183 198 MAP7D3 MAP7 domain-containing protein 3 yes no 2;3 1.7586E-23 135.23 By MS/MS By MS/MS 2 2 15781000 9555800 6224900 1996 108 2127 4463;4464;4465;4466 3605;3606;3607 3605 136;1917 3 SASVSSISLTK HSSPFHSRSASVSSIS VSSISLTKGTDEVPVP R S A T K G 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 5 1 0 0 1 0 0 11 0 1078.587 G5E9C8;Q07889 G5E9C8 1117 1127 SOS1 Son of sevenless homolog 1 yes no 2 0.00069161 96.067 By MS/MS By MS/MS 1 2 4379400 1849700 2529700 1997 574 2128;2129 4467;4468;4469 3608;3609 3608 681;682 2 SASWGSADQLK AEKRSHQRSASWGSAD WGSADQLKEQIAKLRQ R S A L K E 2 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 0 1 0 0 0 0 11 0 1148.5462 H7C0Q2;Q86VQ1 H7C0Q2 109 119 GLCCI1 Glucocorticoid-induced transcript 1 protein yes no 2 0.0048605 68.44 By MS/MS By MS/MS 1 1 5155600 2799000 2356600 1998 673 2130 4470;4471 3610;3611 3611 795 2 SASWGSTDQLK KKKGSHKRSASWGSTD WGSTDQLKEIAKLRQQ R S A L K E 1 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 1 1 0 0 0 0 11 0 1178.5568 Q6P1L5 Q6P1L5 271 281 FAM117B Protein FAM117B yes yes 2 4.5309E-06 108.98 By MS/MS By MS/MS 1 1 7193200 3830900 3362300 1999 1193 2131 4472;4473 3612;3613 3613 1401 2 SATDGNTSTTPPTSAK AAAAQEVRSATDGNTS TTPPTSAKKRKLNSSS R S A A K K 2 0 1 1 0 0 0 1 0 0 0 1 0 0 2 3 5 0 0 0 0 0 16 0 1534.7111 K4DI93;Q13620 K4DI93 27 42 CUL4B Cullin-4B yes no 2 2.7612E-05 92.247 By MS/MS By MS/MS 1 1 3868900 1841700 2027200 2000 721 2132 4474;4475 3614;3615;3616 3614 2066;2067 3 SAVLHSQSSSSSSR IYYFPRSKSAVLHSQS QSSSSSSRQLVP____ K S A S R Q 1 1 0 0 0 1 0 0 1 0 1 0 0 0 0 8 0 0 0 1 0 0 14 0 1418.675 A0A0A0MRH8;A0A0A0MSH9 A0A0A0MRH8 599 612 CHD1L yes no 2 0.010396 50.659 By MS/MS 1 340350 340350 0 2001 102 2133 4476 3617 3617 126 1 SAVRPASLNLNR VHYATMARSAVRPASL PASLNLNRSRSLSNSN R S A N R S 2 2 2 0 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 12 1 1296.7262 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 882 893 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 0.019947 47.301 By MS/MS By matching 1 1 1581700 778440 803300 2002 1342 2134 4477;4478 3618 3618 1 SCAVAEYGVYVK TGILSFDKSCAVAEYG AEYGVYVKVTSIQDWV K S C V K V 2 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 2 3 0 0 12 0 1344.6384 A0A087WU08;A0A0C4DGL8;J3QLC9;J3QR68;H0Y300;P00738;A0A0A0MRD9;P00739 A0A087WU08 255 266 HP;HPR Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain;Haptoglobin-related protein yes no 2 0.0029884 79.986 By MS/MS 1 336900 0 336900 2003 24 2135 4479 3619 3619 1 SCFESSPDPELK QSVTPQRRSCFESSPD SSPDPELKSRTPSRHS R S C L K S 0 0 0 1 1 0 2 0 0 0 1 1 0 1 2 3 0 0 0 0 0 0 12 0 1394.6024 Q9UQ35;I3L182;I3L4D8 Q9UQ35 871 882 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 1.6614E-08 124.38 By MS/MS By MS/MS 1 1 31874000 17953000 13921000 2004 1487 2136 4480;4481 3620;3621 3620 1810;1811 2 SCTPSPDQISHR SASASAERSCTPSPDQ SPDQISHRASLEDAPV R S C H R A 0 1 0 1 1 1 0 0 1 1 0 0 0 0 2 3 1 0 0 0 0 0 12 0 1383.6201 C9J6P4;Q7Z2W4 C9J6P4 271 282 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.016738 53.377 By MS/MS By matching 1 1 3272500 1985100 1287400 2005 323 2137 4482;4483 3622 3622 1 SDAGLESDTAMK ________________ LESDTAMKKGETLRKQ R S D M K K 2 0 0 2 0 0 1 1 0 0 1 1 1 0 0 2 1 0 0 0 0 0 12 0 1223.534 Q9NR30 Q9NR30 7 18 DDX21 Nucleolar RNA helicase 2 yes yes 2 6.5882E-07 107.53 By matching By MS/MS 1 1 986790 499030 487770 2006 1418 2138 4484;4485 3623 3623 1718 1 SDGSLEDGDDVHR LIEDGGARSDGSLEDG EDGDDVHRAVDNERDG R S D H R A 0 1 0 4 0 0 1 2 1 0 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1400.5804 Q9NRX5 Q9NRX5 361 373 SERINC1 Serine incorporator 1 yes yes 2 0.0019555 73.877 By MS/MS By matching 2 1 2566800 1869900 696880 2007 1421 2139 4486;4487;4488 3624;3625 3625 1721;1722 2 SDGSTHHVSDQSKRMQEEK S D E K 0 1 0 2 0 2 2 1 2 0 0 2 1 0 0 4 1 0 0 1 0 0 19 2 2184.9818 REV__O75563 yes yes 3 0.0075266 46.892 By matching By MS/MS 1 1 3585500 1683400 1902100 + 2008 1533 2140 4489;4490 3626 3626 264 1878 1 SDKSPDLAPTPAPQSTPR KAAKQEARSDKSPDLA PAPQSTPRNTVSQSIS R S D P R N 2 1 0 2 0 1 0 0 0 0 1 1 0 0 5 3 2 0 0 0 0 0 18 1 1863.9327 F8WAE5;Q9BY44 F8WAE5 498 515 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 2;3 0.0025215 63.894 By MS/MS By MS/MS 2 2 53526000 31047000 22478000 2009 533 2141 4491;4492;4493;4494 3627;3628;3629 3627 622;623 3 SDLLLEGFNNYR SGAGEHLKSDLLLEGF LEGFNNYRFLSNGYIP K S D Y R F 0 1 2 1 0 0 1 1 0 0 3 0 0 1 0 1 0 0 1 0 0 0 12 0 1439.7045 P35580 P35580 297 308 MYH10 Myosin-10 yes yes 2 0.015961 53.751 By MS/MS 1 210780 210780 0 2010 951 2142 4495 3630 3630 0 SDSGGSSSEPFDR SGLVPRERSDSGGSSS SSSEPFDRHAPAMLRE R S D D R H 0 1 0 2 0 0 1 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 13 0 1326.5324 P48634 P48634 759 771 PRRC2A Protein PRRC2A yes yes 2 0.001768 77.204 By MS/MS By MS/MS 1 1 2976600 1520400 1456200 2011 973 2143 4496;4497 3631;3632;3633 3631 1108;1109 3 SDSQASLTVPLSPQVVR KSTSVLSKSDSQASLT PLSPQVVRSKAVSHRT K S D V R S 1 1 0 1 0 2 0 0 0 0 2 0 0 0 2 4 1 0 0 3 0 0 17 0 1782.9476 Q8TEV9 Q8TEV9 487 503 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein yes yes 2 0.0079296 50.145 By MS/MS 1 425710 425710 0 2012 1287 2144 4498 3634 3634 1520 1 SDSSQPMLLR SPSTSLQRSDSSQPML SSQPMLLRVVGSQTSD R S D L R V 0 1 0 1 0 1 0 0 0 0 2 0 1 0 1 3 0 0 0 0 0 0 10 0 1132.5547 E7EQR9;F5GZY3;E7EQS5;F8VX32;E7ESB2;H0Y304;A0A087WV90;E9PDN5;A0A087WTU7;A0A075B6G3;P11532 E7EQR9 892 901 DMD Dystrophin yes no 2 0.0018048 80.834 By MS/MS By MS/MS 1 1 1213400 551040 662320 2013 5 2145 4499;4500 3635;3636 3635 2 2 SDVLELTDDNFESR ________________ TDDNFESRISDTGSAG - S D S R I 0 1 1 3 0 0 2 0 0 0 2 0 0 1 0 2 1 0 0 1 0 0 14 0 1638.7373 H7BZJ3 H7BZJ3 1 14 PDIA3 yes yes 2 0.00040664 93.442 By MS/MS By MS/MS 1 1 2647500 1573300 1074200 2014 672 2146 4501;4502 3637;3638 3638 2 SEAPAEVTHFSPK KVAQRIKKSEAPAEVT EVTHFSPKSIPDYDFE K S E P K S 2 0 0 0 0 0 2 0 1 0 0 1 0 1 2 2 1 0 0 1 0 0 13 0 1398.6779 Q6PID6 Q6PID6 187 199 TTC33 Tetratricopeptide repeat protein 33 yes yes 2 0.0071973 56.139 By MS/MS 1 2639400 2639400 0 2015 1200 2147 4503 3639 3639 1406 1 SEDESETEDEEEKSQEDQEQKR KEKKRKKRSEDESETE QEDQEQKRKRRKTRQP R S E K R K 0 1 0 3 0 3 9 0 0 0 0 2 0 0 0 3 1 0 0 0 0 0 22 2 2683.0853 Q7Z6P5;J3KQ69;P25205 Q7Z6P5 163 184 MCM3 DNA replication licensing factor MCM3 yes no 3;4 2.9364E-17 97.776 By MS/MS By MS/MS 2 2 92017000 46155000 45863000 2016 706 2148 4504;4505;4506;4507 3640;3641;3642 3640 832 3 SEDMPFSPK EQNPPPARSEDMPFSP EDMPFSPKASVAAMEA R S E P K A 0 0 0 1 0 0 1 0 0 0 0 1 1 1 2 2 0 0 0 0 0 0 9 0 1036.4535 Q12888;A6NNK5;C9JXV0 Q12888 259 267 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0015732 123.67 By MS/MS By MS/MS 2 2 5016900 2654600 2362300 2017 1069 2149;2150 4508;4509;4510;4511 3643;3644;3645;3646;3647;3648 3646 193 1228 6 SEESPVYSNSSVR PSDWWVVKSEESPVYS VYSNSSVRNELPMHHN K S E V R N 0 1 1 0 0 0 2 0 0 0 0 0 0 0 1 5 0 0 1 2 0 0 13 0 1439.6529 H0Y8J2;Q03188 H0Y8J2 442 454 CENPC Centromere protein C yes no 2 0.0041796 63.662 By MS/MS By MS/MS 1 1 1979000 1037800 941240 2018 601 2151 4512;4513 3649;3650;3651;3652 3649 721 4 SEGAWRTKSR S E S R 1 2 0 0 0 0 1 1 0 0 0 1 0 0 0 2 1 1 0 0 0 0 10 2 1176.6 REV__P30304 yes yes 2 0.0078569 63.966 By matching By MS/MS 1 1 3138900 1825900 1313000 + 2019 1535 2152 4514;4515 3653 3653 1879;1880 0 SEPHSPGIPEIFR SSSSKGIKSEPHSPGI PGIPEIFRTASQRCRD K S E F R T 0 1 0 0 0 0 2 1 1 2 0 0 0 1 3 2 0 0 0 0 0 0 13 0 1464.7361 Q9UJJ2;Q8ND82 Q9UJJ2 76 88 ZNF280C Zinc finger protein 280C yes no 3 5.9727E-05 99.927 By MS/MS By MS/MS 1 1 2081900 1037200 1044700 2020 1267 2153 4516;4517 3654;3655 3654 1498 2 SEPSLEPESFRSPTFGK SSRHPSYRSEPSLEPE FRSPTFGKSFHFDPLS R S E G K S 0 1 0 0 0 0 3 1 0 0 1 1 0 2 3 4 1 0 0 0 0 0 17 1 1893.9109 Q9C0B5;H0YEF4 Q9C0B5 398 414 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase yes no 3 0.0036293 54.501 By MS/MS 1 461810 461810 0 2021 1384 2154 4518 3656 3656 1653 1 SESPKEPEQLR ________________ PKEPEQLRKLFIGGLS K S E L R K 0 1 0 0 0 1 3 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 11 1 1298.6466 F8W6I7;P09651;F8VTQ5;F8W646 F8W6I7 4 14 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 2;3 1.2862E-09 141.34 By MS/MS By MS/MS 2 2 160890000 90241000 70645000 2022 527 2155 4519;4520;4521;4522 3657;3658;3659 3658 617 3 SESPKEPEQLRK ________________ KEPEQLRKLFIGGLSF K S E R K L 0 1 0 0 0 1 3 0 0 0 1 2 0 0 2 2 0 0 0 0 0 0 12 2 1426.7416 F8W6I7;P09651;F8VTQ5;F8W646 F8W6I7 4 15 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 3 0.0013351 93.839 By MS/MS By MS/MS 1 1 46100000 29905000 16196000 2023 527 2156 4523;4524 3660;3661;3662 3662 617 3 SESPPAELPSLR LRKSTKKRSESPPAEL PAELPSLRRSTRQKTT R S E L R R 1 1 0 0 0 0 2 0 0 0 2 0 0 0 3 3 0 0 0 0 0 0 12 0 1281.6565 Q14669;G5E9G6;H7C1L9 Q14669 310 321 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.006455 61.212 By MS/MS By MS/MS 1 1 5302400 2436800 2865600 2024 1103 2157 4525;4526 3663;3664 3664 1278 2 SESPPPLSDPK TSAITASRSESPPPLS PPPLSDPKQAKVVARR R S E P K Q 0 0 0 1 0 0 1 0 0 0 1 1 0 0 4 3 0 0 0 0 0 0 11 0 1152.5663 Q15059 Q15059 261 271 BRD3 Bromodomain-containing protein 3 yes yes 2 0.00026765 100.09 By MS/MS By MS/MS 1 1 10335000 5567000 4768400 2025 1117 2158 4527;4528 3665;3666;3667;3668 3667 1304 4 SESSGILPNTTDMR QTHPPCRRSESSGILP LPNTTDMRLRPGTRRD R S E M R L 0 1 1 1 0 0 1 1 0 1 1 0 1 0 1 3 2 0 0 0 0 0 14 0 1506.6984 Q92667;I3L2A2;I3L2N7;I3L0K6 Q92667 105 118 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.0039035 59.306 By MS/MS By MS/MS 2 2 3007100 1379500 1627500 2026 1307 2159;2160 4529;4530;4531;4532 3669;3670;3671 3669 225 1540;1541 3 SESSTSAFSTPTR RILKPQLKSESSTSAF SAFSTPTRSIPPRHNA K S E T R S 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 5 3 0 0 0 0 0 13 0 1356.6157 Q8WWQ0 Q8WWQ0 1471 1483 PHIP PH-interacting protein yes yes 2 0.012638 60.196 By MS/MS 1 549630 0 549630 2027 1292 2161 4533 3672 3672 0 SESVEGFLSPSR HSGKRTPRSESVEGFL EGFLSPSRCGSRNGEK R S E S R C 0 1 0 0 0 0 2 1 0 0 1 0 0 1 1 4 0 0 0 1 0 0 12 0 1293.6201 Q08AD1 Q08AD1 1311 1322 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 4.2537E-06 105.19 By MS/MS By MS/MS 2 2 2065200 1075700 989520 2028 1061 2162 4534;4535;4536;4537 3673;3674;3675 3675 1214 3 SESVVSGLDSPAK KALGILGRSESVVSGL SGLDSPAKTSSMEKKL R S E A K T 1 0 0 1 0 0 1 1 0 0 1 1 0 0 1 4 0 0 0 2 0 0 13 0 1274.6354 H7BYJ3;O14578 H7BYJ3 59 71 CIT Citron Rho-interacting kinase yes no 2 0.00038011 94.551 By MS/MS By MS/MS 1 1 2702700 1387000 1315700 2029 669 2163 4538;4539 3676;3677 3676 792 2 SESVVYADIR HHSDKINKSESVVYAD SVVYADIRKN______ K S E I R K 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 2 0 0 1 2 0 0 10 0 1137.5666 O95297 O95297 258 267 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.00037224 93.111 By MS/MS By MS/MS 1 1 13785000 7204000 6581200 2030 818 2164 4540;4541 3678;3679 3678 2391 2 SETAPAAPAAPAPAEKTPVK ________________ PAEKTPVKKKARKSAG M S E V K K 7 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 2 0 0 1 0 0 20 1 1903.0051 P10412 P10412 2 21 HIST1H1E Histone H1.4 yes yes 3 0.0031117 60.735 By matching By MS/MS 1 1 6060500 3608600 2451900 2031 881 2165 4542;4543 3680 3680 2104 1 SETAPAAPAAPAPAEKTPVKK ________________ AEKTPVKKKARKSAGA M S E K K K 7 0 0 0 0 0 2 0 0 0 0 3 0 0 5 1 2 0 0 1 0 0 21 2 2031.1001 P10412 P10412 2 22 HIST1H1E Histone H1.4 yes yes 3 0.0001249 77.543 By MS/MS By matching 1 1 3355200 2182200 1172900 2032 881 2166 4544;4545 3681 3681 2104 1 SEVQQPVHPKPLSPDSR DSRDSQVKSEVQQPVH KPLSPDSRASSLSESS K S E S R A 0 1 0 1 0 2 1 0 1 0 1 1 0 0 4 3 0 0 0 2 0 0 17 1 1899.9803 F8VS07;F8VQE1;Q9UHB6;F8VRN8 F8VS07 48 64 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0050913 52.172 By MS/MS By MS/MS 1 1 13553000 8863200 4690000 2033 511 2167 4546;4547 3682;3683;3684 3683 604 2 SFDEVEGVFGR GECGFYQRSFDEVEGV EVEGVFGRGGGREMHR R S F G R G 0 1 0 1 0 0 2 2 0 0 0 0 0 2 0 1 0 0 0 2 0 0 11 0 1240.5724 I1E4Y6;Q6Y7W6;E7ESB6;C9JW88 I1E4Y6 139 149 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 0.010329 56.551 By MS/MS By matching 1 1 912590 508130 404450 2034 687 2168 4548;4549 3685 3685 812 1 SFDHLISDTK KKLLGTRKSFDHLISD DHLISDTKAPKRQEME K S F T K A 0 0 0 2 0 0 0 0 1 1 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1161.5666 J3QSG6;H0Y465;P21359 J3QSG6 338 347 NF1 Neurofibromin;Neurofibromin truncated yes no 2 0.0020266 78.903 By MS/MS By MS/MS 1 1 8294100 4672700 3621400 2035 585 2169 4550;4551 3686;3687 3687 699 2 SFDLQKSEDMLRK LLRWLQARSFDLQKSE KSEDMLRKHMEFRKQQ R S F R K H 0 1 0 2 0 1 1 0 0 0 2 2 1 1 0 2 0 0 0 0 0 0 13 2 1595.7977 B5MCN3 B5MCN3 46 58 SEC14L6 Putative SEC14-like protein 6 yes yes 2 0.0069573 45.997 By MS/MS By matching 1 1 392390 266000 126390 2036 278 2170 4552;4553 3688 3688 51 1 SFEEEGEHLGSR RLEAVTARSFEEEGEH EGEHLGSRKHRMSEEK R S F S R K 0 1 0 0 0 0 4 2 1 0 1 0 0 1 0 2 0 0 0 0 0 0 12 0 1375.6004 Q9BXW6 Q9BXW6 499 510 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 2 4.6439E-10 132.14 By MS/MS By MS/MS 1 1 7179200 3674400 3504800 2037 1379 2171 4554;4555 3689;3690 3689 1645 2 SFESTVGQGSDTYIYIFR RLKPLFNKSFESTVGQ DTYIYIFRVCREAGNH K S F F R V 0 1 0 1 0 1 1 2 0 2 0 0 0 2 0 3 2 0 2 1 0 0 18 0 2068.9742 F5GXE0;H0YGE9;F5GXU0;F5H883;F5GX30;P20645 F5GXE0 59 76 M6PR Cation-dependent mannose-6-phosphate receptor yes no 2 0.0037322 89.959 By MS/MS By matching 1 1 5147000 2696900 2450200 2038 488 2172 4556;4557 3691 3691 1 SFEVEEVETPNSTPPR RPFTALKRSFEVEEVE TPNSTPPRRVQTPLLR R S F P R R 0 1 1 0 0 0 4 0 0 0 0 0 0 1 3 2 2 0 0 2 0 0 16 0 1816.8479 K7EJV0;K7EPY1;K7ENL0;Q9UHD8 K7EJV0 15 30 SEPT9 Septin-9 yes no 2 1.6753E-05 88.561 By MS/MS By MS/MS 1 1 3881500 2129500 1752000 2039 726 2173 4558;4559 3692;3693;3694 3694 849 3 SFLMNSQHAK LSKSALLRSFLMNSQH LMNSQHAKIKNQAIIT R S F A K I 1 0 1 0 0 1 0 0 1 0 1 1 1 1 0 2 0 0 0 0 0 0 10 0 1161.5601 Q3T906 Q3T906 738 747 GNPTAB N-acetylglucosamine-1-phosphotransferase subunits alpha/beta;N-acetylglucosamine-1-phosphotransferase subunit alpha;N-acetylglucosamine-1-phosphotransferase subunit beta yes yes 2 0.012334 49.418 By MS/MS 1 0 0 0 2040 1144 2174 4560 3695 3695 209 1 SFLSEPSSPGR ________________ SEPSSPGRTKTTKGFK R S F G R T 0 1 0 0 0 0 1 1 0 0 1 0 0 1 2 4 0 0 0 0 0 0 11 0 1162.5619 H0YC41;Q69YN4 H0YC41 5 15 KIAA1429 Protein virilizer homolog yes no 2 6.633E-21 152.38 By MS/MS By MS/MS 1 1 11234000 6046500 5187400 2041 609 2175 4561;4562 3696;3697 3697 731 2 SFNYSPNSSTSEVSSTSASK SAQPFIPKSFNYSPNS VSSTSASKASIGQSPG K S F S K A 1 0 2 0 0 0 1 0 0 0 0 1 0 1 1 9 2 0 1 1 0 0 20 0 2065.9076 Q5VT52 Q5VT52 589 608 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 0.0030051 64.104 By matching By MS/MS 1 1 7486400 3684100 3802300 2042 1176 2176 4563;4564 3698 3698 1386 1 SFPNLAFIR TIPNGYFKSFPNLAFI FPNLAFIRLNYNKLTD K S F I R L 1 1 1 0 0 0 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 0 9 0 1063.5815 P51888 P51888 264 272 PRELP Prolargin yes yes 2 0.007972 79.116 By MS/MS By matching 1 1 707300 633890 73414 2043 997 2177 4565;4566 3699 3699 1 SFSADNFIGIQR LCRAAMRRSFSADNFI DNFIGIQRSKAILS__ R S F Q R S 1 1 1 1 0 1 0 1 0 2 0 0 0 2 0 2 0 0 0 0 0 0 12 0 1353.6677 Q8N7R7 Q8N7R7 342 353 CCNYL1 Cyclin-Y-like protein 1 yes yes 2 0.00076433 86.288 By MS/MS By matching 1 1 6199100 2999400 3199700 2044 1260 2178 4567;4568 3700 3700 1486 1 SFSAHCTQVVNAK KVKRRSPKSFSAHCTQ CTQVVNAKKNAIPVSK K S F A K K 2 0 1 0 1 1 0 0 1 0 0 1 0 1 0 2 1 0 0 2 0 0 13 0 1447.6878 B4DUJ5;Q8IWP9 B4DUJ5 13 25 CCDC28A Coiled-coil domain-containing protein 28A yes no 2 0.0057449 59.227 By MS/MS 1 671490 671490 0 2045 270 2179 4569 3701 3701 338 1 SFSKEELMSSDLEETAGSTSIPK FSKPKKKKSFSKEELM AGSTSIPKRKKSTPKE K S F P K R 1 0 0 1 0 0 4 1 0 1 2 2 1 1 1 6 2 0 0 0 0 0 23 1 2472.1578 O00567 O00567 511 533 NOP56 Nucleolar protein 56 yes yes 3 9.7084E-05 76.186 By MS/MS By MS/MS 2 2 23998000 15200000 8798400 2046 757 2180;2181 4570;4571;4572;4573 3702;3703;3704 3702 115 878;879;882 3 SFSKEVEER ARTPATKRSFSKEVEE FSKEVEERSRERPSQP R S F E R S 0 1 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 9 1 1109.5353 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1022 1030 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2;3 0.0035312 88.177 By MS/MS By MS/MS 3 2 162840000 147070000 15778000 2047 426 2182 4574;4575;4576;4577;4578 3705;3706;3707;3708;3709 3706 494;495 5 SFSLASSSNSPISQR NNPPLKSRSFSLASSS SNSPISQRRPSQNAIS R S F Q R R 1 1 1 0 0 1 0 0 0 1 1 0 0 1 1 7 0 0 0 0 0 0 15 0 1566.7638 Q9BXB4 Q9BXB4 172 186 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 2 3.8267E-14 122.33 By MS/MS By MS/MS 2 2 13128000 7462500 5665900 2048 1376 2183 4579;4580;4581;4582 3710;3711;3712;3713 3710 1638;1639;1640 4 SFSMQDLR GALAGRLRSFSMQDLR SFSMQDLRSISDAPAP R S F L R S 0 1 0 1 0 1 0 0 0 0 1 0 1 1 0 2 0 0 0 0 0 0 8 0 982.45422 E5RGS2;Q9H6H4 E5RGS2 150 157 REEP4 Receptor expression-enhancing protein;Receptor expression-enhancing protein 4 yes no 2 0.0062137 110.31 By MS/MS By MS/MS 1 1 8631100 4305200 4325900 2049 385 2184 4583;4584 3714;3715 3715 442 2 SFSSPENFQR SSAQIIQRSFSSPENF SSPENFQRQAVMNSAL R S F Q R Q 0 1 1 0 0 1 1 0 0 0 0 0 0 2 1 3 0 0 0 0 0 0 10 0 1197.5415 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 14 23 RBM7 RNA-binding protein 7 yes no 2 0.00013798 97.734 By MS/MS By MS/MS 1 1 16212000 8926500 7285500 2050 551 2185 4585;4586 3716;3717 3716 649 2 SFSSQRPVDR PKREIAKRSFSSQRPV SSQRPVDRQNRRGNNG R S F D R Q 0 2 0 1 0 1 0 0 0 0 0 0 0 1 1 3 0 0 0 1 0 0 10 1 1177.584 E7EPN9;Q9Y520;H7C5N8 E7EPN9 1544 1553 PRRC2C Protein PRRC2C yes no 2 0.0050129 72.289 By MS/MS By matching 1 1 29915000 16881000 13034000 2051 406 2186 4587;4588 3718 3718 459 1 SFSSSAEEHS LRNHIRSRSFSSSAEE SSSAEEHS________ R S F H S - 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 5 0 0 0 0 0 0 10 0 1066.4203 Q96EQ0 Q96EQ0 295 304 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 2 1.3402E-05 120.45 By MS/MS By MS/MS 1 1 5893600 3447400 2446200 2052 1329 2187 4589;4590 3719;3720;3721 3719 1566 3 SFVPEEEKHEER TRTRGRKRSFVPEEEK EEEKHEERVPRERRQR R S F E R V 0 1 0 0 0 0 5 0 1 0 0 1 0 1 1 1 0 0 0 1 0 0 12 1 1514.7001 A0A0U1RRH6;O94880 A0A0U1RRH6 835 846 PHF14 PHD finger protein 14 yes no 3 5.0177E-06 103.97 By MS/MS By MS/MS 1 1 4007300 2327900 1679400 2053 202 2188 4591;4592 3722;3723 3723 252 2 SFVPEEEKHEERVPR TRTRGRKRSFVPEEEK KHEERVPRERRQRQSV R S F P R E 0 2 0 0 0 0 5 0 1 0 0 1 0 1 2 1 0 0 0 2 0 0 15 2 1866.9224 A0A0U1RRH6;O94880 A0A0U1RRH6 835 849 PHF14 PHD finger protein 14 yes no 4 0.0069123 43.042 By MS/MS By matching 1 1 1515800 810770 705010 2054 202 2189 4593;4594 3724 3724 252 1 SGAHSSASPPR FDWGYEERSGAHSSAS HSSASPPRSRSRDRSH R S G P R S 2 1 0 0 0 0 0 1 1 0 0 0 0 0 2 4 0 0 0 0 0 0 11 0 1052.4999 P18615;A0A0G2JI50;E9PD43;A0A0A0MT02;A0A0A0MSN9 P18615 174 184 NELFE Negative elongation factor E yes no 2;3 0.001402 82.774 By MS/MS By matching 2 1 12305000 6884200 5420400 2055 910 2190 4595;4596;4597 3725;3726 3725 1031 2 SGDEEFKGEDELCDSGR DDAAGDFRSGDEEFKG DELCDSGRQRGPATYP R S G G R Q 0 1 0 3 1 0 4 3 0 0 1 1 0 1 0 2 0 0 0 0 0 0 17 1 1928.7694 M0QYL4;O43823 M0QYL4 153 169 AKAP8 A-kinase anchor protein 8 yes no 3 0.017464 42.618 By matching By MS/MS 1 1 752060 261730 490330 2056 744 2191 4598;4599 3727 3727 1 SGDETPGSEVPGDK EEDEPEERSGDETPGS GSEVPGDKAAEEQGDD R S G D K A 0 0 0 2 0 0 2 3 0 0 0 1 0 0 2 2 1 0 0 1 0 0 14 0 1373.5947 H3BQZ7;Q1KMD3 H3BQZ7 161 174 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 2 0.0018256 71.879 By matching By MS/MS 1 1 1390300 879950 510380 2057 656 2192 4600;4601 3728 3728 771 1 SGEGEVSGLMR VSGVKRSRSGEGEVSG GEVSGLMRKVPRVSLE R S G M R K 0 1 0 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 0 1 0 0 11 0 1120.5183 M0R0K9;Q13263 M0R0K9 98 108 TRIM28 Transcription intermediary factor 1-beta yes no 2 0.0020959 75.788 By MS/MS By MS/MS 2 2 15998000 8422300 7575700 2058 746 2193;2194 4602;4603;4604;4605 3729;3730;3731 3731 113 863 3 SGEVAEGEARSPSHK GMQAVKIKSGEVAEGE EARSPSHKKRAADERH K S G H K K 2 1 0 0 0 0 3 2 1 0 0 1 0 0 1 3 0 0 0 1 0 0 15 1 1539.7277 O00257 O00257 281 295 CBX4 E3 SUMO-protein ligase CBX4 yes yes 3 0.0023233 56.139 By MS/MS By MS/MS 1 1 2471800 1402800 1068900 2059 751 2195 4606;4607 3732;3733 3733 869 2 SGFGEISSPVIR ________________ EISSPVIREAEVTRTA R S G I R E 0 1 0 0 0 0 1 2 0 2 0 0 0 1 1 3 0 0 0 1 0 0 12 0 1247.651 G3V1T4;P57740 G3V1T4 4 15 NUP107 Nuclear pore complex protein Nup107 yes no 2 0.00077587 85.554 By MS/MS By MS/MS 1 1 9641900 5277600 4364300 2060 550 2196 4608;4609 3734;3735 3735 646;647 2 SGGSGHAVAEPASPEQELDQNKGK VSRKSRPKSGGSGHAV ELDQNKGKGRDVESVQ K S G G K G 3 0 1 1 0 2 3 4 1 0 1 2 0 0 2 3 0 0 0 1 0 0 24 1 2392.1255 P46013 P46013 296 319 MKI67 Antigen KI-67 yes yes 3 0.0010839 54.12 By MS/MS By MS/MS 1 1 4416600 2777300 1639300 2061 964 2197 4610;4611 3736;3737 3737 1091 2 SGGVTEASSLLGGSPR YSTRGDQRSGGVTEAS SLLGGSPRRPCGRKGS R S G P R R 1 1 0 0 0 0 1 4 0 0 2 0 0 0 1 4 1 0 0 1 0 0 16 0 1473.7423 Q92729 Q92729 840 855 PTPRU Receptor-type tyrosine-protein phosphatase U yes yes 2 0.00050106 82.349 By MS/MS By matching 1 1 1437100 812090 624980 2062 1309 2198 4612;4613 3738 3738 1544 1 SGKNSQEDSEDSEDKDVK REAKNKRRSGKNSQED DSEDKDVKTKKDDSHS R S G V K T 0 0 1 4 0 1 3 1 0 0 0 3 0 0 0 4 0 0 0 1 0 0 18 2 1995.8505 Q9H1E3 Q9H1E3 50 67 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 3.5431E-27 120.9 By MS/MS By matching 3 3 79885000 51381000 28504000 2063 1393 2199;2200 4614;4615;4616;4617;4618;4619 3739;3740;3741 3741 1678;1679 3 SGLTVPTSPK DSGSDALRSGLTVPTS LTVPTSPKGRLLDRRS R S G P K G 0 0 0 0 0 0 0 1 0 0 1 1 0 0 2 2 2 0 0 1 0 0 10 0 985.54441 Q53EL6;Q5VZS7 Q53EL6 87 96 PDCD4 Programmed cell death protein 4 yes no 2 0.0022477 76.326 By matching By MS/MS 1 1 76570000 42435000 34136000 2064 1149 2201 4620;4621 3742 3742 1339;1340;2170 1 SGLTVPTSPKGR DSGSDALRSGLTVPTS VPTSPKGRLLDRRSRS R S G G R L 0 1 0 0 0 0 0 2 0 0 1 1 0 0 2 2 2 0 0 1 0 0 12 1 1198.667 Q53EL6;Q5VZS7 Q53EL6 87 98 PDCD4 Programmed cell death protein 4 yes no 2 0.0033359 80.312 By MS/MS By MS/MS 1 2 3168700 921230 2247500 2065 1149 2202 4622;4623;4624 3743;3744 3744 1339;1340;2170 2 SGNTFRPEVHLLPPPSEELALNELVTLTCLAR PLTATLSKSGNTFRPE VTLTCLARGFSPKDVL K S G A R G 2 2 2 0 1 0 4 1 1 0 7 0 0 1 4 2 3 0 0 2 0 0 32 1 3572.8661 P01876;A0A0G2JMB2;P01877 P01876 222 253 IGHA1;IGHA2 Ig alpha-1 chain C region;Ig alpha-2 chain C region yes no 4 2.0688E-09 60.541 By MS/MS By MS/MS 1 1 13978000 7020500 6957700 2066 841 2203 4625;4626 3745;3746;3747 3745 3 SGPLEACYGELGQSR SRMLRQQRSGPLEACY YGELGQSRMYFNASGP R S G S R M 1 1 0 0 1 1 2 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 15 0 1622.7359 Q9NXD2 Q9NXD2 701 715 MTMR10 Myotubularin-related protein 10 yes yes 2 0.0041607 56.936 By matching By MS/MS 1 1 1944700 939470 1005300 2067 1438 2204 4627;4628 3748 3748 2504 1 SGSAAQAEGLCK AGLRKRGRSGSAAQAE AQAEGLCKQWLQRAWQ R S G C K Q 3 0 0 0 1 1 1 2 0 0 1 1 0 0 0 2 0 0 0 0 0 0 12 0 1177.5397 F8WF93;H7BZZ2;F8WE30;H7C0X4;Q92685 F8WF93 11 22 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase yes no 2 0.0018238 78.964 By MS/MS By MS/MS 1 1 1761700 1092900 668810 2068 542 2205 4629;4630 3749;3750;3751 3750 635 3 SGSGISVISSTSVDQR PPSFRRVRSGSGISVI SSTSVDQRLPEEPVLE R S G Q R L 0 1 0 1 0 1 0 2 0 2 0 0 0 0 0 6 1 0 0 2 0 0 16 0 1578.7849 D6PAW0;C9JQZ7;A8CTZ0;F8W7U0;Q15811 D6PAW0 197 212 ITSN1 Intersectin-1 yes no 2 0.0023445 57.288 By MS/MS By matching 1 1 6314700 3318700 2996000 2069 241 2206 4631;4632 3752 3752 292;293 1 SGSKENVQETQI IHEPLLFKSGSKENVQ ENVQETQI________ K S G Q I - 0 0 1 0 0 2 2 1 0 1 0 1 0 0 0 2 1 0 0 1 0 0 12 1 1318.6365 Q9NT99 Q9NT99 702 713 LRRC4B Leucine-rich repeat-containing protein 4B yes yes 2 0.0013159 85.45 By MS/MS 1 818490 818490 0 2070 1426 2207 4633 3753 3753 1726 1 SGSMDPSGAHPSVR RMSRSSGRSGSMDPSG SGAHPSVRQTPSRQPP R S G V R Q 1 1 0 1 0 0 0 2 1 0 0 0 1 0 2 4 0 0 0 1 0 0 14 0 1383.6201 Q07666 Q07666 18 31 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 2;3 7.8735E-15 130.66 By MS/MS By MS/MS 2 3 152390000 79606000 72783000 2071 1057 2208;2209 4634;4635;4636;4637;4638 3754;3755;3756;3757;3758;3759 3759 191 1211;1212 6 SGSPNLPHSVSSYK PHREKYPRSGSPNLPH PHSVSSYKSREDGYYR R S G Y K S 0 0 1 0 0 0 0 1 1 0 1 1 0 0 2 5 0 0 1 1 0 0 14 0 1458.7103 Q5T481 Q5T481 740 753 RBM20 RNA-binding protein 20 yes yes 3 0.0022317 58.595 By MS/MS 1 710480 0 710480 2072 1168 2210 4639 3760 3760 1373;1374 1 SGSSSPDSEITELK PRDTYSDRSGSSSPDS DSEITELKFPSINHD_ R S G L K F 0 0 0 1 0 0 2 1 0 1 1 1 0 0 1 5 1 0 0 0 0 0 14 0 1435.6678 P17812 P17812 571 584 CTPS1 CTP synthase 1 yes yes 2 4.7089E-08 106.58 By MS/MS By MS/MS 1 1 4491700 2020900 2470800 2073 907 2211 4640;4641 3761;3762 3762 1025;1026 2 SGSSSPDSEITELKFPSINHD PRDTYSDRSGSSSPDS KFPSINHD________ R S G H D - 0 0 1 2 0 0 2 1 1 2 1 1 0 1 2 6 1 0 0 0 0 0 21 1 2246.0339 P17812 P17812 571 591 CTPS1 CTP synthase 1 yes yes 2 0.014721 47.532 By MS/MS By matching 1 1 3603700 2292000 1311700 2074 907 2212 4642;4643 3763 3763 1025;1026 1 SGSTLDGVSRKK DAFMSEMKSGSTLDGV LDGVSRKKLHLRTFEL K S G K K L 0 1 0 1 0 0 0 2 0 0 1 2 0 0 0 3 1 0 0 1 0 0 12 2 1233.6677 A0A087X0M4;Q9BWU0 A0A087X0M4 491 502 SLC4A1AP Kanadaptin yes no 2 0.019254 46.797 By MS/MS 1 0 0 0 2075 72 2213 4644 3764 3764 1 SGSVYEPLK SPSSAFLRSGSVYEPL GSVYEPLKSINLPRPD R S G L K S 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 2 0 0 1 1 0 0 9 0 978.50221 I3L3F2;H3BV13;H3BQ89;Q93100 I3L3F2 18 26 PHKB Phosphorylase b kinase regulatory subunit beta yes no 2 0.0078158 62.582 By MS/MS 1 0 0 0 2076 652 2214 4645 3765 3765 2363 1 SGSYSYLEER RYDSLLGRSGSYSYLE SYSYLEERKPYSSRLE R S G E R K 0 1 0 0 0 0 2 1 0 0 1 0 0 0 0 3 0 0 2 0 0 0 10 0 1189.5251 O14974;A0A0U1RQZ1;H0YIM2;H0YIS3 O14974 908 917 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.00062102 90.108 By MS/MS By MS/MS 2 2 4961600 2763100 2198600 2077 765 2215 4646;4647;4648;4649 3766;3767;3768 3766 894;2384 3 SGTSSPQSPVFR LGLAIEPKSGTSSPQS SPQSPVFRHRTLENSP K S G F R H 0 1 0 0 0 1 0 1 0 0 0 0 0 1 2 4 1 0 0 1 0 0 12 0 1248.6099 Q8N556 Q8N556 661 672 AFAP1 Actin filament-associated protein 1 yes yes 2 0.00043176 99.011 By MS/MS By MS/MS 1 1 4376200 2420100 1956100 2078 1257 2216 4650;4651 3769;3770 3770 1482 2 SGYHDDSDEDLLE DTASHTNKSGYHDDSD DSDEDLLE________ K S G L E - 0 0 0 4 0 0 2 1 1 0 2 0 0 0 0 2 0 0 1 0 0 0 13 0 1493.5794 Q99523 Q99523 819 831 SORT1 Sortilin yes yes 2 1.6234E-09 110.08 By MS/MS By MS/MS 1 1 11658000 6843900 4814300 2079 1355 2217 4652;4653 3771;3772 3771 1610 2 SHCIAEVENDEMPADLPSLAADFVESK CEKPLLEKSHCIAEVE AADFVESKDVCKNYAE K S H S K D 4 0 1 3 1 0 4 0 1 1 2 1 1 1 2 3 0 0 0 2 0 0 27 0 2973.3372 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 311 337 ALB Serum albumin yes no 3 9.8484E-49 112.26 By MS/MS By MS/MS 1 1 14388000 8860400 5527700 + 2080 152 2218 4654;4655 3773;3774 3773 24 2 SHHAPMSPGSSGGGGQPLAR ASGGAQQRSHHAPMSP GGGQPLARTPQPSSPM R S H A R T 2 1 0 0 0 1 0 5 2 0 1 0 1 0 3 4 0 0 0 0 0 0 20 0 1886.8806 O14497 O14497 357 376 ARID1A AT-rich interactive domain-containing protein 1A yes yes 3 3.4192E-11 93.551 By MS/MS By matching 1 1 4118400 1970200 2148200 2081 758 2219 4656;4657 3775 3775 883 1 SHILEDDENSVDISMLK ASGRPRQRSHILEDDE SVDISMLKTGSSLLKE R S H L K T 0 0 1 3 0 0 2 0 1 2 2 1 1 0 0 3 0 0 0 1 0 0 17 0 1943.9146 O75717 O75717 374 390 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 3 0.001583 51.591 By MS/MS 1 845900 0 845900 2082 802 2220 4658 3776 3776 127 944 1 SHSPSSPDPDTPSPVGDSR SPHLDSSRSHSPSSPD PSPVGDSRALQASRNT R S H S R A 0 1 0 3 0 0 0 1 1 0 0 0 0 0 5 6 1 0 0 1 0 0 19 0 1920.845 H0YDB2;E9PNJ4;Q13586;G0XQ39 H0YDB2 378 396 STIM1 Stromal interaction molecule 1 yes no 2;3 0.0012954 61.477 By MS/MS By matching 2 2 3951700 2209200 1742500 2083 469 2221 4659;4660;4661;4662 3777;3778 3778 555 2 SHSQASLAGPGPVDPSNR YWNGKLLRSHSQASLA GPVDPSNRSNSMLELA R S H N R S 2 1 1 1 0 1 0 2 1 0 1 0 0 0 3 4 0 0 0 1 0 0 18 0 1775.8551 A2A3M4;A6PVU7;Q9P2M7 A2A3M4 135 152 CGN Cingulin yes no 3 0.0011269 61.87 By MS/MS By MS/MS 1 1 3122500 1738500 1384000 2084 225 2222 4663;4664 3779;3780 3779 279 2 SHSWVNSAYAPGGSK LASKGIDRSHSWVNSA AYAPGGSKAVLRRAPP R S H S K A 2 0 1 0 0 0 0 2 1 0 0 1 0 0 1 4 0 1 1 1 0 0 15 0 1546.7165 K7EKT0;K7ESB7 K7EKT0 112 126 DOCK6 yes no 2 0.0051118 53.924 By MS/MS 1 943420 943420 0 2085 729 2223 4665 3781 3781 851 1 SHYADVDPENQNFLLESNLGK PTKQAALKSHYADVDP LLESNLGKKKYETEFN K S H G K K 1 0 3 2 0 1 2 1 1 0 3 1 0 1 1 2 0 0 1 1 0 0 21 0 2389.1186 F8VUY8;Q96QD8 F8VUY8 39 59 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 3 0.0017988 52.03 By MS/MS By MS/MS 1 1 7697000 4975300 2721700 2086 518 2224 4666;4667 3782;3783 3782 607;2345 2 SIEVENDFLPVEK KPIKLRPRSIEVENDF NDFLPVEKTIGKKLPA R S I E K T 0 0 1 1 0 0 3 0 0 1 1 1 0 1 1 1 0 0 0 2 0 0 13 0 1517.7613 Q5JPT1;Q5VSN0;Q5JPT2;Q96B97 Q5JPT1 177 189 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes no 2 1.5667E-09 114.7 By MS/MS By MS/MS 1 1 7042000 3851800 3190200 2087 1155 2225 4668;4669 3784;3785 3784 1346 2 SILAKPSSSPDPR LTSVMVPKSILAKPSS PSSSPDPRYLSVPPSP K S I P R Y 1 1 0 1 0 0 0 0 0 1 1 1 0 0 3 4 0 0 0 0 0 0 13 1 1353.7252 Q9BTC0 Q9BTC0 1011 1023 DIDO1 Death-inducer obliterator 1 yes yes 2 0.0006827 87.566 By MS/MS By MS/MS 1 1 3948400 2115600 1832800 2088 1363 2226 4670;4671 3786;3787 3786 1622;1623;1624 2 SILPYPVSPK GRTKSSYKSILPYPVS LPYPVSPKQKYSHVIL K S I P K Q 0 0 0 0 0 0 0 0 0 1 1 1 0 0 3 2 0 0 1 1 0 0 10 0 1099.6277 H3BP52;H3BTF4;Q8IWI9 H3BP52 917 926 MGA MAX gene-associated protein yes no 2 0.0028026 72.705 By MS/MS By MS/MS 2 2 1890900 897980 992940 2089 647 2227 4672;4673;4674;4675 3788;3789;3790;3791;3792 3788 761 5 SILSPGGSCGPIK VMVTDADRSILSPGGS GGSCGPIKVKTEPTED R S I I K V 0 0 0 0 1 0 0 3 0 2 1 1 0 0 2 3 0 0 0 0 0 0 13 0 1271.6544 P78347 P78347 207 219 GTF2I General transcription factor II-I yes yes 2 0.0042563 63.292 By matching By MS/MS 1 1 15136000 7771900 7364100 2090 1032 2228 4676;4677 3793 3793 1174 1 SILVSPTGPSR AEFKKTDKSILVSPTG VSPTGPSRVAFDPEQK K S I S R V 0 1 0 0 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1112.619 Q14684 Q14684 702 712 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.0016841 80.69 By MS/MS By MS/MS 1 1 12671000 6291400 6379600 2091 1106 2229 4678;4679 3794;3795 3794 1284 2 SIPLECPLSSPK ALTGGEAKSIPLECPL ECPLSSPKGVLFSSKS K S I P K G 0 0 0 0 1 0 1 0 0 1 2 1 0 0 3 3 0 0 0 0 0 0 12 0 1326.6853 Q92667;I3L2A2;I3L2N7 Q92667 142 153 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 8.6512E-06 102.33 By MS/MS By MS/MS 1 1 13772000 7305700 6466500 2092 1307 2230 4680;4681 3796;3797 3796 1542;1543 2 SIPMTVDFIR ALNRNSDRSIPMTVDF PMTVDFIRLKSYCNDQ R S I I R L 0 1 0 1 0 0 0 0 0 2 0 0 1 1 1 1 1 0 0 1 0 0 10 0 1177.6165 P00492 P00492 92 101 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.00058251 83.862 By matching By MS/MS 1 1 2095900 1419000 676880 2093 831 2231 4682;4683 3798 3798 2095 0 SIQDLTVTGTEPGQVSSR GNGQPRRRSIQDLTVT EPGQVSSRSSSPSVRM R S I S R S 0 1 0 1 0 2 1 2 0 1 1 0 0 0 1 3 3 0 0 2 0 0 18 0 1873.9381 Q9UG54;O43318 Q9UG54 93 110 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 2 0.0019171 73.928 By MS/MS By MS/MS 1 1 16811000 9519200 7292200 2094 780 2232 4684;4685 3799;3800 3800 907 2 SIRKYLTSNTAYGK QEEVENLKSIRKYLTS TSNTAYGKTGIRDVHL K S I G K T 1 1 1 0 0 0 0 1 0 1 1 2 0 0 0 2 2 0 2 0 0 0 14 2 1600.8573 Q8TE04 Q8TE04 272 285 PANK1 Pantothenate kinase 1 yes yes 2 0.015711 51.092 By MS/MS 1 0 0 0 2095 1282 2233 4686 3801 3801 2477 1 SISADDDLQESSR PTFQPFQRSISADDDL DDLQESSRRPQRKSLY R S I S R R 1 1 0 3 0 1 1 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0 13 0 1421.627 P18615;A0A0G2JI50;E9PD43;A0A0A0MT02;A0A0A0MSN9;A2ABK4 P18615 113 125 NELFE Negative elongation factor E yes no 2 1.4016E-19 143.25 By MS/MS By MS/MS 1 1 42911000 23655000 19256000 2096 910 2234 4687;4688 3802;3803 3803 1032 2 SISADSFDQR KGKGKRERSISADSFD SADSFDQRDPGTPNDD R S I Q R D 1 1 0 2 0 1 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 10 0 1124.5098 O00512 O00512 102 111 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 0.002048 78.653 By matching By MS/MS 1 1 1855000 873210 981790 2097 756 2235 4689;4690 3804 3804 877 1 SISASKASPPGDLQNPK TQSLHSLRSISASKAS PGDLQNPKRARQDPT_ R S I P K R 2 0 1 1 0 1 0 1 0 1 1 2 0 0 3 4 0 0 0 0 0 0 17 1 1695.8792 O00273 O00273 308 324 DFFA DNA fragmentation factor subunit alpha yes yes 2 0.0036436 60.08 By MS/MS By MS/MS 1 1 8797900 5467000 3330900 2098 754 2236 4691;4692 3805;3806 3806 875 2 SISGTPAETPACK AAQSGLTRSISGTPAE PAETPACKSASETKVI R S I C K S 2 0 0 0 1 0 1 1 0 1 0 1 0 0 2 2 2 0 0 0 0 0 13 0 1317.6235 F8VWT9;J3KPF0;Q9Y4D8 F8VWT9 1361 1373 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes no 2 0.011803 51.726 By MS/MS By matching 1 1 2138800 1328500 810250 2099 521 2237 4693;4694 3807 3807 610 1 SISLSQSAENVPASK GFEFFRNRSISLSQSA AENVPASKFSLQKTLS R S I S K F 2 0 1 0 0 1 1 0 0 1 1 1 0 0 1 5 0 0 0 1 0 0 15 0 1516.7733 H0YFN7;Q4ADV7 H0YFN7 907 921 RIC1 RAB6A-GEF complex partner protein 1 yes no 2 4.0227E-05 94.007 By MS/MS By MS/MS 1 1 2878400 1747100 1131300 2100 618 2238 4695;4696 3808;3809 3808 739 2 SISLYYTGEK QGTEIDGRSISLYYTG SLYYTGEKGQNQDYRG R S I E K G 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P19338;H7BY16 P19338 458 467 NCL Nucleolin yes no 2 0.018717 62.582 By MS/MS 1 276990 276990 0 2101 914 2239 4697 3810 3810 1 SITLFVQEDR LLATGQWKSITLFVQE TLFVQEDRAQLYIDCE K S I D R A 0 1 0 1 0 1 1 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1206.6245 P07996;CON__Q28194 P07996 155 164 THBS1 Thrombospondin-1 yes no 2 7.5415E-05 122.13 By MS/MS By MS/MS 1 1 2320500 1668400 652070 + 2102 870 2240 4698;4699 3811;3812 3811 2 SIVPSSPQPQR SSLCRSRRSIVPSSPQ PSSPQPQRAQLAPHAP R S I Q R A 0 1 0 0 0 2 0 0 0 1 0 0 0 0 3 3 0 0 0 1 0 0 11 0 1194.6357 H7C5C6;H7C5K2;H7C5A5;H0Y860;Q9P246 H7C5C6 120 130 STIM2 Stromal interaction molecule 2 yes no 2 0.0034943 71.085 By MS/MS By matching 1 1 1999500 1064700 934780 2103 599 2241 4700;4701 3813 3813 718 1 SIVSSSISAFTLPVIK GSKKCETKSIVSSSIS AFTLPVIKLNNCVIDE K S I I K L 1 0 0 0 0 0 0 0 0 3 1 1 0 1 1 5 1 0 0 2 0 0 16 0 1647.9447 Q86VY9 Q86VY9 279 294 TMEM200A Transmembrane protein 200A yes yes 2 0.008413 48.188 By matching By MS/MS 1 1 2222300 956480 1265800 2104 1232 2242 4702;4703 3814 3814 1451;1452 1 SIYYITGESK SRMKETQKSIYYITGE YYITGESKEQVANSAF K S I S K E 0 0 0 0 0 0 1 1 0 2 0 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P08238;Q58FF8 P08238 482 491 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 0.00023755 84.615 By MS/MS By matching 1 1 711160 488670 222490 2105 871 2243 4704;4705 3815 3815 0 SKAEAESLYQSKYEELQITAGR QNEDIAQKSKAEAESL ELQITAGRHGDSVRNS K S K G R H 3 1 0 0 0 2 4 1 0 1 2 2 0 0 0 3 1 0 2 0 0 0 22 2 2500.2445 CON__P04264;P04264 CON__P04264 365 386 KRT1 Keratin, type II cytoskeletal 1 yes no 4 0.007278 46.368 By MS/MS By matching 1 1 1146000 570520 575530 + 2106 354 2244 4706;4707 3816 3816 1 SKESVPEFPLSPPK FELILSPRSKESVPEF EFPLSPPKKKDLSLEE R S K P K K 0 0 0 0 0 0 2 0 0 0 1 2 0 1 4 3 0 0 0 1 0 0 14 1 1540.8137 A2A2D0;P16949 A2A2D0 28 41 STMN1 Stathmin yes no 2;3 2.5518E-34 149.22 By MS/MS By MS/MS 2 2 9958400 6911900 3046500 2107 223 2245 4708;4709;4710;4711 3817;3818;3819;3820;3821;3822 3818 277 6 SKLRIMSPMR TSSLSPQRSKLRIMSP LRIMSPMRTGNTYSRN R S K M R T 0 2 0 0 0 0 0 0 0 1 1 1 2 0 1 2 0 0 0 0 0 0 10 2 1217.6737 Q03164 Q03164 2205 2214 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 0.014622 46.844 By MS/MS 1 0 0 0 2108 1048 2246 4712 3823 3823 189 1 SKLSPSPSLR EVSPEVVRSKLSPSPS LSPSPSLRKSSKSPKR R S K L R K 0 1 0 0 0 0 0 0 0 0 2 1 0 0 2 4 0 0 0 0 0 0 10 1 1070.6084 Q5T200;A0A087WX14 Q5T200 204 213 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.012879 65.179 By MS/MS 1 5344600 0 5344600 2109 1167 2247 4713 3824 3824 1 SKPIPIMPASPQK EELLAEEKSKPIPIMP IMPASPQKGHAVNLLD K S K Q K G 1 0 0 0 0 1 0 0 0 2 0 2 1 0 4 2 0 0 0 0 0 0 13 1 1392.7799 G8JLD5;O00429 G8JLD5 583 595 DNM1L Dynamin-1-like protein yes no 2 0.0023305 80.387 By MS/MS By MS/MS 2 2 8003500 4360400 3643200 2110 577 2248;2249 4714;4715;4716;4717 3825;3826 3826 96 686 2 SKSDSYTLDPDTLR KLDPPRERSKSDSYTL TLDPDTLRKKKMPLTE R S K L R K 0 1 0 3 0 0 0 0 0 0 2 1 0 0 1 3 2 0 1 0 0 0 14 1 1596.7631 O75592 O75592 2831 2844 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 0.0071783 58.164 By MS/MS By matching 1 1 5249800 2924100 2325600 2111 800 2250 4718;4719 3827 3827 941 1 SKSEDMDNVQSK NEFSRRKRSKSEDMDN DMDNVQSKRRRYMEEE R S K S K R 0 0 1 2 0 1 1 0 0 0 0 2 1 0 0 3 0 0 0 1 0 0 12 1 1366.6035 Q6VMQ6 Q6VMQ6 557 568 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 2 2.3218E-05 74.133 By MS/MS 1 631510 631510 0 2112 1207 2251 4720 3828 3828 1413 0 SKSEEAHAEDSVMDHHFR KKGFVLHKSKSEEAHA SVMDHHFRKPANDITS K S K F R K 2 1 0 2 0 0 3 0 3 0 0 1 1 1 0 3 0 0 0 1 0 0 18 1 2110.9127 Q8NC51 Q8NC51 328 345 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3;4;5 5.3677E-10 96.55 By MS/MS By MS/MS 3 3 99398000 52277000 47120000 2113 1264 2252 4721;4722;4723;4724;4725;4726 3829;3830;3831;3832 3829 1489;1490 4 SKSETGDSSIFR REKPLKRRSKSETGDS TGDSSIFRKLRNAKGE R S K F R K 0 1 0 1 0 0 1 1 0 1 0 1 0 1 0 4 1 0 0 0 0 0 12 1 1312.6259 O43166 O43166 286 297 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes yes 2 0.013721 56.951 By MS/MS By matching 1 1 1581900 891880 689980 2114 777 2253 4727;4728 3833 3833 1 SKSPSPPRLTEDR SSQGLKEKSKSPSPPR PPRLTEDRKKASLVAL K S K D R K 0 2 0 1 0 0 1 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 13 2 1468.7634 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 326 338 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.0058135 49.356 By MS/MS 1 2289300 2289300 0 2115 412 2254 4729 3834 3834 470;1980 1 SKSVIEQVSWDT TRQLRNIRSKSVIEQV IEQVSWDT________ R S K D T - 0 0 0 1 0 1 1 0 0 1 0 1 0 0 0 3 1 1 0 2 0 0 12 1 1377.6776 H0Y7E2;Q6WCQ1 H0Y7E2 1080 1091 MPRIP Myosin phosphatase Rho-interacting protein yes no 2 0.0034718 74.537 By matching By MS/MS 1 1 1600800 828360 772440 2116 597 2255 4730;4731 3835 3835 716 1 SKSVKEDSNLTLQEK KTPDKMKKSKSVKEDS SNLTLQEKKEKIQTGL K S K E K K 0 0 1 1 0 1 2 0 0 0 2 3 0 0 0 3 1 0 0 1 0 0 15 2 1704.8894 H0YLE8;P46940 H0YLE8 869 883 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 3 0.0015548 81.788 By MS/MS By MS/MS 1 1 5280600 3688600 1591900 2117 624 2256 4732;4733 3836;3837 3836 746 2 SKVGSTENIK APDLKNVRSKVGSTEN VGSTENIKHQPGGGRA R S K I K H 0 0 1 0 0 0 1 1 0 1 0 2 0 0 0 2 1 0 0 1 0 0 10 1 1061.5717 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4 E7EVA0 2082 2091 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 1.6932E-06 139.19 By MS/MS By MS/MS 2 2 12799000 7414000 5384800 2118 427 2257 4734;4735;4736;4737 3838;3839;3840;3841;3842;3843 3839 501;1987 6 SLAPDRSDDEHDPLDNTSRPR SSPTSYWKSLAPDRSD LDNTSRPRYSHSYLSD K S L P R Y 1 3 1 5 0 0 1 0 1 0 2 0 0 0 3 3 1 0 0 0 0 0 21 2 2392.1003 A0A0D9SFK2;Q92614 A0A0D9SFK2 1998 2018 MYO18A Unconventional myosin-XVIIIa yes no 4 0.0033728 45.704 By MS/MS By matching 1 1 3782400 2212800 1569700 2119 171 2258 4738;4739 3844 3844 216 1 SLDIAPGDMLDKVAR SDFLLLGKSLDIAPGD DMLDKVARRLSLIKHP K S L A R R 2 1 0 3 0 0 0 1 0 1 2 1 1 0 1 1 0 0 0 1 0 0 15 1 1599.829 E5RGZ1;E7EVL7;Q9H4B0 E5RGZ1 45 59 OSGEPL1 Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial yes no 2 0.012475 45.359 By matching By MS/MS 1 1 1397300 793640 603640 2120 386 2259 4740;4741 3845 3845 64 0 SLDNNYSTPNER SNMGSNTKSLDNNYST NYSTPNERGDHNRTLD K S L E R G 0 1 3 1 0 0 1 0 0 0 1 0 0 0 1 2 1 0 1 0 0 0 12 0 1408.6219 C9JZR2;O60716;H0YC95 C9JZR2 899 910 CTNND1 Catenin delta-1 yes no 2 0.0016266 70.977 By MS/MS By MS/MS 1 2 21104000 11446000 9658400 2121 348 2260 4742;4743;4744 3846;3847 3847 2321 1 SLDNNYSTPNERGDHNR SNMGSNTKSLDNNYST NERGDHNRTLDRSGDL K S L N R T 0 2 4 2 0 0 1 1 1 0 1 0 0 0 1 2 1 0 1 0 0 0 17 1 1987.8732 C9JZR2;O60716;H0YC95 C9JZR2 899 915 CTNND1 Catenin delta-1 yes no 3 0.0074485 50.653 By MS/MS By matching 1 1 4640600 2723500 1917100 2122 348 2261 4745;4746 3848 3848 2321 1 SLEDLQLTHNK ESVGPLPKSLEDLQLT DLQLTHNKITKLGSFE K S L N K I 0 0 1 1 0 1 1 0 1 0 3 1 0 0 0 1 1 0 0 0 0 0 11 0 1296.6674 P51884 P51884 138 148 LUM Lumican yes yes 2;3 0.0011634 94.616 By MS/MS 2 1302300 1302300 0 2123 996 2262 4747;4748 3849;3850 3850 2 SLEDPYSQQIR PRTTIFVKSLEDPYSQ DPYSQQIRLQQQQAQQ K S L I R L 0 1 0 1 0 2 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 0 11 0 1334.6466 A0A087WXK3;Q9NVH2 A0A087WXK3 120 130 INTS7 Integrator complex subunit 7 yes no 2 0.0081429 68.371 By MS/MS By matching 1 1 926210 494890 431320 2124 51 2263 4749;4750 3851 3851 2261 1 SLEGGGCPAR EEGKRSRRSLEGGGCP EGGGCPARAPEPGPTG R S L A R A 1 1 0 0 1 0 1 3 0 0 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1002.4553 Q9Y613 Q9Y613 367 376 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.00021889 93.442 By matching By MS/MS 1 1 825910 379680 446230 2125 1516 2264 4751;4752 3852 3852 1860 1 SLEVIPEKANDETGE ADVQKPRRSLEVIPEK KANDETGE________ R S L G E - 1 0 1 1 0 0 4 1 0 1 1 1 0 0 1 1 1 0 0 1 0 0 15 1 1629.7734 Q9UPR0 Q9UPR0 1113 1127 PLCL2 Inactive phospholipase C-like protein 2 yes yes 2 0.0022797 63.709 By MS/MS By matching 1 1 2662200 1562000 1100200 2126 1481 2265 4753;4754 3853 3853 1792 1 SLEYLDLSFNQIAR SAAFKGLKSLEYLDLS LSFNQIARLPSGLPVS K S L A R L 1 1 1 1 0 1 1 0 0 1 3 0 0 1 0 2 0 0 1 0 0 0 14 0 1667.8519 P51884 P51884 185 198 LUM Lumican yes yes 2;3 2.7213E-149 228.84 By MS/MS By MS/MS 2 2 130480000 62253000 68230000 2127 996 2266 4755;4756;4757;4758 3854;3855;3856;3857;3858 3858 5 SLFHYRQYSAGK KSRKVDSKSLFHYRQY YRQYSAGKAA______ K S L G K A 1 1 0 0 0 1 0 1 1 0 1 1 0 1 0 2 0 0 2 0 0 0 12 1 1455.7259 P31327 P31327 1487 1498 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 2 0.018442 42.629 By MS/MS By matching 1 1 1418900 786030 632850 2128 944 2267 4759;4760 3859 3859 2406 0 SLGGAVGSVASGAR APAAPRSRSLGGAVGS GSVASGARAAQSPFSI R S L A R A 3 1 0 0 0 0 0 4 0 0 1 0 0 0 0 3 0 0 0 2 0 0 14 0 1187.6258 Q8NHG8 Q8NHG8 82 95 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 yes yes 2 0.0014657 79.614 By MS/MS By MS/MS 1 1 3053400 1513900 1539600 2129 1274 2268 4761;4762 3860;3861;3862 3860 1507 3 SLGKDGSLEDDEDEEDDLDEGVGGK MVENEVIKSLGKDGSL LDEGVGGKRRSMEVKP K S L G K R 0 0 0 7 0 0 5 5 0 0 3 2 0 0 0 2 0 0 0 1 0 0 25 1 2622.094 Q12789 Q12789 1605 1629 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.015258 41.423 By MS/MS By matching 1 1 5106500 3457300 1649200 2130 1065 2269 4763;4764 3863 3863 1 SLGNILQAKPTSSPAK AVAPAQEKSLGNILQA KPTSSPAKGPPQKAGP K S L A K G 2 0 1 0 0 1 0 1 0 1 2 2 0 0 2 3 1 0 0 0 0 0 16 1 1610.8992 J3KQ96;E7ETY2;Q13428 J3KQ96 571 586 TCOF1 Treacle protein yes no 2;3 7.7231E-06 95.477 By MS/MS By matching 2 1 17220000 12407000 4812800 2131 422 2270 4765;4766;4767 3864;3865 3864 485;486;1984 2 SLGNILQAKPTSSPAKGPPQK AVAPAQEKSLGNILQA PAKGPPQKAGPVAVQV K S L Q K A 2 0 1 0 0 2 0 2 0 1 2 3 0 0 4 3 1 0 0 0 0 0 21 2 2118.1797 J3KQ96;E7ETY2;Q13428 J3KQ96 571 591 TCOF1 Treacle protein yes no 3 0.0074537 52.731 By matching By MS/MS 1 1 14871000 8947900 5922900 2132 422 2271 4768;4769 3866 3866 485;486;1984 1 SLGSASPGPGQPPLSSPTR SKSNGQPKSLGSASPG PPLSSPTRGGVKKVSG K S L T R G 1 1 0 0 0 1 0 3 0 0 2 0 0 0 5 5 1 0 0 0 0 0 19 0 1791.9115 Q9C0B5 Q9C0B5 679 697 ZDHHC5 Palmitoyltransferase ZDHHC5 yes yes 2 0.0099716 47.729 By MS/MS By matching 1 1 1959000 1019700 939370 2133 1384 2272 4770;4771 3867 3867 1654;1655 1 SLKESEQESEEEILAQKK VEGNKGTKSLKESEQE EEILAQKKEQREEEVE K S L K K E 1 0 0 0 0 2 6 0 0 1 2 3 0 0 0 3 0 0 0 0 0 0 18 2 2104.0536 Q9BW71 Q9BW71 219 236 HIRIP3 HIRA-interacting protein 3 yes yes 3 0.0016141 65.298 By MS/MS By MS/MS 1 1 16140000 10053000 6086200 2134 1372 2273 4772;4773 3868;3869 3869 1635;1636 2 SLKLSPVQK MSLNSNEKSLKLSPVQ LKLSPVQKQKDHEFSK K S L Q K Q 0 0 0 0 0 1 0 0 0 0 2 2 0 0 1 2 0 0 0 1 0 0 9 1 998.61243 H7C4H4;Q92834 H7C4H4 37 45 RPGR X-linked retinitis pigmentosa GTPase regulator yes no 2 0.0034195 123.01 By MS/MS 1 1113600 0 1113600 2135 683 2274 4774 3870 3870 804 1 SLLSSPTK KTYVSCLKSLLSSPTK SLLSSPTKDSKPNISA K S L T K D 0 0 0 0 0 0 0 0 0 0 2 1 0 0 1 3 1 0 0 0 0 0 8 0 831.47018 Q92667;I3NI36 Q92667 441 448 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.012669 90.15 By MS/MS By matching 1 1 1399000 708100 690940 2136 1307 2275 4775;4776 3871 3871 1 SLPTTVPESPNYR PEPSTIARSLPTTVPE VPESPNYRNTRTPRTP R S L Y R N 0 1 1 0 0 0 1 0 0 0 1 0 0 0 3 2 2 0 1 1 0 0 13 0 1459.7307 A0A0B4J210;Q6PKG0;E5RH50;H0YC33 A0A0B4J210 766 778 LARP1 La-related protein 1 yes no 2 0.00032365 94.007 By MS/MS By MS/MS 1 1 21691000 11643000 10048000 2137 139 2276 4777;4778 3872;3873 3873 173;174;1928 2 SLPTTVPESPNYRNTR PEPSTIARSLPTTVPE SPNYRNTRTPRTPRTP R S L T R T 0 2 2 0 0 0 1 0 0 0 1 0 0 0 3 2 3 0 1 1 0 0 16 1 1830.9224 A0A0B4J210;Q6PKG0;E5RH50;H0YC33 A0A0B4J210 766 781 LARP1 La-related protein 1 yes no 3 0.0093995 52.891 By MS/MS 1 0 0 0 2138 139 2277 4779 3874 3874 173;174;1928 1 SLPVSVPVWGFK LPTQQYAKSLPVSVPV SVPVWGFKEKRTEARS K S L F K E 0 0 0 0 0 0 0 1 0 0 1 1 0 1 2 2 0 1 0 3 0 0 12 0 1314.7336 Q96B36 Q96B36 183 194 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.00059437 97.779 By matching By MS/MS 1 1 3299400 2184800 1114600 2139 1322 2278 4780;4781 3875 3875 1556 1 SLQDIIAILGMDELSEEDKLTVSR QKILQDYKSLQDIIAI EDKLTVSRARKIQRFL K S L S R A 1 1 0 3 0 1 3 1 0 3 4 1 1 0 0 3 1 0 0 1 0 0 24 1 2674.3735 P06576;F8W079 P06576 433 456 ATP5B ATP synthase subunit beta, mitochondrial yes no 3 8.7308E-09 82.593 By MS/MS By matching 1 1 6038400 4162500 1876000 2140 859 2279 4782;4783 3876 3876 134 1 SLQQLAEER KELNERWRSLQQLAEE LQQLAEERSQLLGSAH R S L E R S 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1072.5513 A0A0D9SF54;A0A0D9SGF6;Q13813 A0A0D9SF54 1197 1205 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 2 0.0058537 72.34 By matching By MS/MS 1 1 2256400 1090800 1165700 2141 169 2280 4784;4785 3877 3877 214 1 SLSASPALGSTK IRGRAKSRSLSASPAL SPALGSTKEFRRTRSL R S L T K E 2 0 0 0 0 0 0 1 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1117.5979 O95544 O95544 46 57 NADK NAD kinase yes yes 2 0.0007187 89.189 By MS/MS By MS/MS 1 1 2862900 1578400 1284500 2142 822 2281 4786;4787 3878;3879 3879 972 2 SLSDSESDDSK EKDGTKRKSLSDSESD DSESDDSKSKKKRDAA K S L S K S 0 0 0 3 0 0 1 0 0 0 1 1 0 0 0 5 0 0 0 0 0 0 11 0 1168.4732 Q13185;S4R2Y4 Q13185 93 103 CBX3 Chromobox protein homolog 3 yes no 2 4.3004E-06 106.79 By MS/MS By MS/MS 1 1 4764000 2263700 2500300 2143 1079 2282 4788;4789 3880;3881;3882;3883;3884 3883 1243 5 SLSDSESDDSKSK EKDGTKRKSLSDSESD ESDDSKSKKKRDAADK K S L S K K 0 0 0 3 0 0 1 0 0 0 1 2 0 0 0 6 0 0 0 0 0 0 13 1 1383.6001 Q13185;S4R2Y4 Q13185 93 105 CBX3 Chromobox protein homolog 3 yes no 2 0.00053034 84.734 By MS/MS By MS/MS 1 2 5284900 2835900 2449100 2144 1079 2283 4790;4791;4792 3885;3886;3887 3887 1243 3 SLSESSVIMDR SPGLARKRSLSESSVI ESSVIMDRAPSVYSFF R S L D R A 0 1 0 1 0 0 1 0 0 1 1 0 1 0 0 4 0 0 0 1 0 0 11 0 1222.5864 H3BNX5;A0A0C4DGM5;Q9H2Y7 H3BNX5 642 652 ZNF106 Zinc finger protein 106 yes no 2 0.0024702 73.067 By MS/MS By MS/MS 2 1 2686600 1770300 916380 2145 161 2284;2285 4793;4794;4795 3888;3889;3890 3890 26 205 3 SLSIEIGHEVK RSKVTAIKSLSIEIGH IEIGHEVKTQNKLLAE K S L V K T 0 0 0 0 0 0 2 1 1 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1210.6558 C9JTT8;Q68DU7;H7C1N3;O15155 C9JTT8 48 58 BET1;DKFZp781C0425 BET1 homolog yes no 2 6.3202E-09 138.2 By MS/MS By matching 1 1 32270000 18192000 14078000 2146 341 2286 4796;4797 3891 3891 407 1 SLSIEIGHEVKTQNK RSKVTAIKSLSIEIGH HEVKTQNKLLAEMVSG K S L N K L 0 0 1 0 0 1 2 1 1 2 1 2 0 0 0 2 1 0 0 1 0 0 15 1 1681.8999 C9JTT8;Q68DU7;H7C1N3;O15155 C9JTT8 48 62 BET1;DKFZp781C0425 BET1 homolog yes no 3 0.001381 60.196 By MS/MS 1 686020 686020 0 2147 341 2287 4798 3892 3892 407 1 SLSLEATSPLSAEK SEILSQPKSLSLEATS TSPLSAEKHSCTVPEG K S L E K H 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 4 1 0 0 0 0 0 14 0 1431.7457 H3BN63;Q86YC2 H3BN63 85 98 PALB2 Partner and localizer of BRCA2 yes no 2 0.011275 50.102 By MS/MS By matching 1 1 866850 451810 415040 2148 639 2288 4799;4800 3893 3893 754 1 SLSPGGAALGYR PGGGGGQRSLSPGGAA GGAALGYRDYRLQQLA R S L Y R D 2 1 0 0 0 0 0 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 12 0 1147.5986 A0A087WWP4;Q96T37 A0A087WWP4 248 259 RBM15 Putative RNA-binding protein 15 yes no 2 0.0032347 71.176 By MS/MS By MS/MS 1 1 41359000 21974000 19384000 2149 45 2289 4801;4802 3894;3895 3894 54;55 2 SLSPILPGR ESTSRNRRSLSPILPG LSPILPGRHSPAPPPD R S L G R H 0 1 0 0 0 0 0 1 0 1 2 0 0 0 2 2 0 0 0 0 0 0 9 0 938.55492 M0QZS0;A0A087WZG4;Q6ZSZ5 M0QZS0 740 748 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes no 2 0.0073782 70.399 By MS/MS 1 621960 621960 0 2150 61 2290 4803 3896 3896 66 1 SLSPSHLTEDR VVRPQESRSLSPSHLT PSHLTEDRQGRWKEED R S L D R Q 0 1 0 1 0 0 1 0 1 0 2 0 0 0 1 3 1 0 0 0 0 0 11 0 1240.6048 Q5T200 Q5T200 875 885 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 0.0021707 74.533 By matching By MS/MS 1 1 13877000 7509100 6367600 2151 1167 2291 4804;4805 3897 3897 1371 1 SLSQGSTNSNMLDVQGGAHK PAMMFRQRSLSQGSTN DVQGGAHKKRARRSSL R S L H K K 1 0 2 1 0 2 0 3 1 0 2 1 1 0 0 4 1 0 0 1 0 0 20 0 2029.9487 B7Z7Y1;E9PCH4;Q8TEU7 B7Z7Y1 1068 1087 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 3 0.0096727 43.38 By MS/MS By MS/MS 1 1 1645400 928360 717080 2152 290 2292 4806;4807 3898;3899 3899 348 2 SLSSGSNFCSEQK SLVKKKERSLSSGSNF SNFCSEQKTSGIINKF R S L Q K T 0 0 1 0 1 1 1 1 0 0 1 1 0 1 0 5 0 0 0 0 0 0 13 0 1429.6144 O95243 O95243 316 328 MBD4 Methyl-CpG-binding domain protein 4 yes yes 2 0.0036516 66.215 By MS/MS By MS/MS 1 1 1499100 805020 694100 2153 815 2293 4808;4809 3900;3901 3900 962 2 SLSSPTVTLSAPLEGAK EPQIRRPRSLSSPTVT SAPLEGAKDSPVRRAV R S L A K D 2 0 0 0 0 0 1 1 0 0 3 1 0 0 2 4 2 0 0 1 0 0 17 0 1656.8934 A0A1B0GVY1;Q96PU5 A0A1B0GVY1 725 741 NEDD4L E3 ubiquitin-protein ligase NEDD4-like yes no 2 0.0099005 48.423 By MS/MS By matching 1 1 6457700 3658500 2799200 2154 218 2294 4810;4811 3902 3902 272 1 SLSSSLDDTEVK TETPIVSKSLSSSLDD SLDDTEVKKVMEECKR K S L V K K 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 4 1 0 0 1 0 0 12 0 1279.6143 O95292 O95292 156 167 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 0.0020231 75.088 By matching By MS/MS 1 1 5809700 2980400 2829300 2155 817 2295 4812;4813 3903 3903 963;964 1 SLSSSLDDTEVKK TETPIVSKSLSSSLDD LDDTEVKKVMEECKRL K S L K K V 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 4 1 0 0 1 0 0 13 1 1407.7093 O95292 O95292 156 168 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 2.4381E-09 117.86 By matching By MS/MS 1 1 1334800 666350 668450 2156 817 2296 4814;4815 3904 3904 963;964 1 SLSVPVDLSR PPSKRHCRSLSVPVDL SVPVDLSRWQPVWRPA R S L S R W 0 1 0 1 0 0 0 0 0 0 2 0 0 0 1 3 0 0 0 2 0 0 10 0 1071.5924 Q9NYF3;D6RHW3 Q9NYF3 120 129 FAM53C Protein FAM53C yes no 2 0.0033974 71.153 By MS/MS By MS/MS 1 1 3614200 2109100 1505100 2157 1441 2297 4816;4817 3905;3906 3905 1747 2 SLSWNMTFQK TSILYFRRSLSWNMTF SWNMTFQKNSSLRQET R S L Q K N 0 0 1 0 0 1 0 0 0 0 1 1 1 1 0 2 1 1 0 0 0 0 10 0 1240.591 H3BPR5 H3BPR5 16 25 PDPK1 yes yes 2 0.014135 50.452 By MS/MS 1 350350 0 350350 2158 649 2298 4818 3907 3907 105 0 SLSYEEPR PIRQGVVRSLSYEEPR SLSYEEPRRHSPPIEK R S L P R R 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 2 0 0 1 0 0 0 8 0 979.46108 F5GZK9;Q8IZD4 F5GZK9 147 154 DCP1B mRNA-decapping enzyme 1B yes no 2 0.0090614 96.342 By MS/MS By matching 1 1 6107300 3109400 2997900 2159 492 2299 4819;4820 3908;3909 3908 581 2 SLSYSPVER IDSLRDSRSLSYSPVE LSYSPVERRRPSPQPS R S L E R R 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 1 1 0 0 9 0 1036.5189 Q9UQ35;I3L4U6 Q9UQ35 2690 2698 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0043696 79.659 By matching By MS/MS 1 1 4025900 2286000 1740000 2160 1487 2300 4821;4822 3910 3910 1812 1 SLTNSHLEK ISDRESRRSLTNSHLE LTNSHLEKKKCDEYIP R S L E K K 0 0 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 9 0 1027.5298 F8VX12;F8VX04;Q9H2H9 F8VX12 52 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 2 0.00216 132.32 By MS/MS By MS/MS 2 2 17257000 10258000 6998700 2161 522 2301;2302 4823;4824;4825;4826 3911;3912;3913;3914;3915 3915 611;612;2015 5 SLVHEVGKPPQDVTDDSPPSK DVDEYERRSLVHEVGK TDDSPPSKKKRMDHVD R S L S K K 0 0 0 3 0 1 1 1 1 0 1 2 0 0 4 3 1 0 0 3 0 0 21 1 2231.107 Q96T58 Q96T58 1206 1226 SPEN Msx2-interacting protein yes yes 3 0.019077 41.214 By MS/MS By matching 1 1 1233600 699710 533850 2162 1353 2303 4827;4828 3916 3916 1 SLYASSPGGVYATR ALRPSTSRSLYASSPG PGGVYATRSSAVRLRS R S L T R S 2 1 0 0 0 0 0 2 0 0 1 0 0 0 1 3 1 0 2 1 0 0 14 0 1427.7045 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 51 64 VIM Vimentin yes no 2 0.00019717 87.363 By MS/MS By MS/MS 4 4 42421000 22185000 20236000 2163 874 2304;2305 4829;4830;4831;4832;4833;4834;4835;4836 3917;3918;3919;3920;3921;3922;3923 3922 1007;1008;2103;2395 7 SLYEDLEDHPNVQK YRRLDIVRSLYEDLED EDHPNVQKDLERLTQE R S L Q K D 0 0 1 2 0 1 2 0 1 0 2 1 0 0 1 1 0 0 1 1 0 0 14 0 1685.7897 P40337 P40337 183 196 VHL Von Hippel-Lindau disease tumor suppressor yes yes 2 0.017756 53.124 By MS/MS 1 0 0 0 2164 956 2306 4837 3924 3924 2410 1 SLYSAISLFNNPVK PTVPKMKKSLYSAISL SLFNNPVKYWEMQPAT K S L V K Y 1 0 2 0 0 0 0 0 0 1 2 1 0 1 1 3 0 0 1 1 0 0 14 0 1551.8297 Q9BXN1 Q9BXN1 342 355 ASPN Asporin yes yes 2 0.0036012 70.412 By MS/MS 1 1413500 1413500 0 2165 1377 2307 4838 3925 3925 1 SMGTGDTPGLEVPSSPLR TRTRPVTRSMGTGDTP EVPSSPLRKAKRARLC R S M L R K 0 1 0 1 0 0 1 3 0 0 2 0 1 0 3 3 2 0 0 1 0 0 18 0 1799.8724 C9J0I9;Q86WB0 C9J0I9 338 355 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.0018933 74.12 By MS/MS By MS/MS 1 1 8585700 5013500 3572200 2166 312 2308 4839;4840 3926;3927 3927 54 373;374 2 SMGTGDTPGLEVPSSPLRK TRTRPVTRSMGTGDTP VPSSPLRKAKRARLCS R S M R K A 0 1 0 1 0 0 1 3 0 0 2 1 1 0 3 3 2 0 0 1 0 0 19 1 1927.9673 C9J0I9;Q86WB0 C9J0I9 338 356 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 1.1228E-16 106.35 By MS/MS By MS/MS 2 2 18577000 11533000 7044900 2167 312 2309 4841;4842;4843;4844 3928;3929;3930 3930 54 373;374 3 SMSFQGIR LLLSVQKRSMSFQGIR SMSFQGIRQPVTVTEL R S M I R Q 0 1 0 0 0 1 0 1 0 1 0 0 1 1 0 2 0 0 0 0 0 0 8 0 924.44874 P15924 P15924 2207 2214 DSP Desmoplakin yes yes 2 0.009694 79.489 By matching By MS/MS 1 1 1569400 773770 795660 2168 902 2310 4845;4846 3931 3931 1022 1 SMSIDDTPR DQDDLKRRSMSIDDTP MSIDDTPRGSWACSIF R S M P R G 0 1 0 2 0 0 0 0 0 1 0 0 1 0 1 2 1 0 0 0 0 0 9 0 1020.4546 Q96N67;A0A0C4DGY6;A0A1B0GVW2;A0A1B0GUE9 Q96N67 180 188 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.017487 57.149 By matching By MS/MS 1 1 5809500 2740900 3068600 2169 1342 2311 4847;4848 3932 3932 1 SNAKANSHYLYR FHQAAKEKSNAKANSH ANSHYLYRHKYENYRM K S N Y R H 2 1 2 0 0 0 0 0 1 0 1 1 0 0 0 2 0 0 2 0 0 0 12 1 1422.7004 A0A087WZL9;Q9H582 A0A087WZL9 302 313 ZNF644 Zinc finger protein 644 yes no 2 0.0079484 59.245 By MS/MS 1 7285200 0 7285200 2170 62 2312 4849 3933 3933 67;68 1 SNESVDIQDQEEK RSGKWKNKSNESVDIQ DIQDQEEKVVKQECIK K S N E K V 0 0 1 2 0 2 3 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 13 0 1519.6638 Q5UIP0 Q5UIP0 1576 1588 RIF1 Telomere-associated protein RIF1 yes yes 2 0.01199 51.546 By MS/MS By matching 1 1 4937300 2409100 2528300 2171 1174 2313 4850;4851 3934 3934 1379 1 SNKMRNMAK DKFLDQERSNKMRNMA NKMRNMAKDKERNQEK R S N A K D 1 1 2 0 0 0 0 0 0 0 0 2 2 0 0 1 0 0 0 0 0 0 9 2 1078.5376 A0A024QZ33;Q9H0G5 A0A024QZ33 418 426 CCDC55;NSRP1 Nuclear speckle splicing regulatory protein 1 yes no 3 0.0077033 57.859 By MS/MS 1 0 0 0 2172 0 2314 4852 3935 3935 0 1 SNMSPHGLPAR GERPGPNRSNMSPHGL SPHGLPARSSGSPKFA R S N A R S 1 1 1 0 0 0 0 1 1 0 1 0 1 0 2 2 0 0 0 0 0 0 11 0 1165.5662 H0Y4T7;E7ESY4;Q13330 H0Y4T7 238 248 MTA1 Metastasis-associated protein MTA1 yes no 2;3 0.010762 91.202 By MS/MS By MS/MS 2 2 5021200 2150500 2870600 2173 419 2315;2316 4853;4854;4855;4856 3936;3937 3936 71 476 1 SNPSIQATLNK SSGLQSSRSNPSIQAT SIQATLNKTVLSSSLN R S N N K T 1 0 2 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 11 0 1171.6197 Q6UUV7 Q6UUV7 329 339 CRTC3 CREB-regulated transcription coactivator 3 yes yes 2 0.0013917 82.85 By matching By MS/MS 1 1 2656300 1385300 1271000 2174 1204 2317 4857;4858 3938;3939 3939 1412 2 SNQNGKDSKPSSTPR TPAKNAQKSNQNGKDS SKPSSTPRSKGQESFK K S N P R S 0 1 2 1 0 1 0 1 0 0 0 2 0 0 2 4 1 0 0 0 0 0 15 2 1601.7758 P06748 P06748 207 221 NPM1 Nucleophosmin yes yes 3 0.0181 43.208 By matching By MS/MS 1 1 3295900 1303800 1992100 2175 861 2318 4859;4860 3940 3940 0 SNSDESNFSEKLR GATNNLSRSNSDESNF SNFSEKLRASTVMYHP R S N L R A 0 1 2 1 0 0 2 0 0 0 1 1 0 1 0 4 0 0 0 0 0 0 13 1 1511.6852 A0A087WWW9;O95999 A0A087WWW9 125 137 BCL10 B-cell lymphoma/leukemia 10 yes no 2 0.0038711 72.2 By MS/MS 1 1408500 0 1408500 2176 46 2319 4861 3941 3941 56 1 SNSEDSSVGKGDWK ERKNPLHKSNSEDSSV SVGKGDWKKKNKYFWQ K S N W K K 0 0 1 2 0 0 1 2 0 0 0 2 0 0 0 4 0 1 0 1 0 0 14 1 1494.6587 O94885 O94885 135 148 SASH1 SAM and SH3 domain-containing protein 1 yes yes 2 0.0088625 55.975 By MS/MS By MS/MS 1 1 1566600 1132400 434180 2177 809 2320 4862;4863 3942;3943 3942 955 2 SNSFNNPLGNR WQPNIPVRSNSFNNPL FNNPLGNRASHSANSQ R S N N R A 0 1 4 0 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 11 0 1218.5741 O95835 O95835 462 472 LATS1 Serine/threonine-protein kinase LATS1 yes yes 2 0.0051503 67.879 By MS/MS By MS/MS 1 1 6198000 3134700 3063300 2178 826 2321 4864;4865 3944;3945 3945 979 2 SNSLPHSAVSNAGSK SVPPPLPRSNSLPHSA AVSNAGSKSSVMDGAI R S N S K S 2 0 2 0 0 0 0 1 1 0 1 1 0 0 1 5 0 0 0 1 0 0 15 0 1454.7114 A0A088AWN2;Q8TBZ3 A0A088AWN2 463 477 WDR20 WD repeat-containing protein 20 yes no 2 4.5819E-05 93.427 By MS/MS By MS/MS 1 1 8432500 5257800 3174700 2179 87 2322 4866;4867 3946;3947 3946 107 2 SNSLSEQLAINTSPDAVK GEPALRTKSNSLSEQL NTSPDAVKAKLISRMA K S N V K A 2 0 2 1 0 1 1 0 0 1 2 1 0 0 1 4 1 0 0 1 0 0 18 0 1872.9429 A0A0A0MT60;Q5T1M5;X6RKW4 A0A0A0MT60 369 386 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 5.2078E-27 114.99 By MS/MS By MS/MS 1 1 5703600 3101100 2602500 2180 127 2323 4868;4869 3948;3949 3949 156;157 2 SNSPLPVPPSK SRSRSQSRSNSPLPVP PLPVPPSKARSVSPPP R S N S K A 0 0 1 0 0 0 0 0 0 0 1 1 0 0 4 3 0 0 0 1 0 0 11 0 1121.6081 Q13247 Q13247 301 311 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 2 0.0017274 80.371 By MS/MS By MS/MS 2 1 3052900 2122800 930020 2181 1080 2324 4870;4871;4872 3950;3951;3952;3953;3954 3952 1245 5 SNSSEALLVDR LFVARTRRSNSSEALL SEALLVDRAAGGGAGS R S N D R A 1 1 1 1 0 0 1 0 0 0 2 0 0 0 0 3 0 0 0 1 0 0 11 0 1189.5939 Q96HB5 Q96HB5 358 368 CCDC120 Coiled-coil domain-containing protein 120 yes yes 2 0.009684 58.274 By MS/MS By matching 2 2 1578200 978260 599970 2182 1334 2325 4873;4874;4875;4876 3955;3956 3955 1573;1574 2 SNSVGIQDAFNDGSDSTFQK PPLPGMSRSNSVGIQD GSDSTFQKRNSMTPNP R S N Q K R 1 0 2 3 0 2 0 2 0 1 0 1 0 2 0 4 1 0 0 1 0 0 20 0 2115.9345 O14497;A0A087WUV6;H0Y488;A0A1B0GTU5 O14497 1182 1201 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 0.018333 43.164 By MS/MS By matching 1 1 1720000 971730 748230 2183 758 2326 4877;4878 3957 3957 1 SNSVSLVPPGSSHTLPR SNHLSLSKSNSVSLVP GSSHTLPRRAQSLKAP K S N P R R 0 1 1 0 0 0 0 1 1 0 2 0 0 0 3 5 1 0 0 2 0 0 17 0 1733.906 Q6R327 Q6R327 1282 1298 RICTOR Rapamycin-insensitive companion of mTOR yes yes 3 0.0078313 44.735 By MS/MS By matching 1 1 1081300 711170 370080 2184 1201 2327 4879;4880 3958 3958 1407 1 SNSWQGNLGGNK ICENGRPRSNSWQGNL QGNLGGNKKKIRGKRF R S N N K K 0 0 3 0 0 1 0 3 0 0 1 1 0 0 0 2 0 1 0 0 0 0 12 0 1260.5847 H7C3I4;H7C0Q9;Q9P0K1 H7C3I4 161 172 ADAM22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 2 0.0078867 57.52 By matching By MS/MS 1 1 1444200 681030 763210 2185 674 2328 4881;4882 3959 3959 796 1 SNSWVNTGGPK IGSKGLDRSNSWVNTG WVNTGGPKAAPWGSNP R S N P K A 0 0 2 0 0 0 0 2 0 0 0 1 0 0 1 2 1 1 0 1 0 0 11 0 1145.5465 Q96N67;A0A0U1RRC1;A0A1B0GWE0 Q96N67 927 937 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.0014114 82.705 By MS/MS By MS/MS 1 1 6641300 3584000 3057300 2186 1342 2329 4883;4884 3960;3961 3961 1591 2 SNTEPQSPPIASPK DTSTWGLKSNTEPQSP SPPIASPKAITKPVRR K S N P K A 1 0 1 0 0 1 1 0 0 1 0 1 0 0 4 3 1 0 0 0 0 0 14 0 1451.7256 F8WF45;P82094 F8WF45 66 79 TMF1 TATA element modulatory factor yes no 2 0.0085878 52.522 By MS/MS By matching 1 1 1554400 897260 657150 2187 543 2330 4885;4886 3962 3962 636 1 SNTPILVDGK LHVALRNRSNTPILVD TPILVDGKDVMPEVNK R S N G K D 0 0 1 1 0 0 0 1 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1042.5659 K7EP41;K7EPY4;A0A0J9YXP8;A0A0J9YX90;A0A0J9YYH3;K7EQ48;A0A0A0MTS2;P06744 K7EP41 107 116 GPI Glucose-6-phosphate isomerase yes no 2 0.0094479 78.324 By matching By MS/MS 1 1 1303300 654950 648330 2188 133 2331 4887;4888 3963 3963 1925 1 SNVSDAVAQSTR EKLRGWLKSNVSDAVA DAVAQSTRIIYGGSVT K S N T R I 2 1 1 1 0 1 0 0 0 0 0 0 0 0 0 3 1 0 0 2 0 0 12 0 1233.5949 P60174 P60174 232 243 TPI1 Triosephosphate isomerase yes yes 2 0.0046775 72.434 By MS/MS By matching 1 1 1117300 743350 373920 2189 1015 2332 4889;4890 3964 3964 1 SPALKSPLQSVVVR SELSPRERSPALKSPL PLQSVVVRRRSPRPSP R S P V R R 1 1 0 0 0 1 0 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 14 1 1479.8773 Q9Y2W1 Q9Y2W1 248 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0070827 58.32 By MS/MS 1 2110300 2110300 0 2190 1501 2333 4891 3965 3965 1836;1837;1838 1 SPAPGAPTRSPSTPAK ANGTPTTKSPAPGAPT RSPSTPAKSPKLQKKN K S P A K S 3 1 0 0 0 0 0 1 0 0 0 1 0 0 5 3 2 0 0 0 0 0 16 1 1520.7947 I3L1L3;Q9BQG0 I3L1L3 1152 1167 MYBBP1A Myb-binding protein 1A yes no 2 0.0086026 59.198 By MS/MS By matching 1 1 1744900 1134700 610180 2191 690 2334 4892;4893 3966 3966 817;2060 1 SPARTPPSEEDSAEAER KEMPQDLRSPARTPPS EDSAEAERLKTEGNEQ R S P E R L 3 2 0 1 0 0 4 0 0 0 0 0 0 0 3 3 1 0 0 0 0 0 17 1 1827.8235 O43765;K7EMD6 O43765 77 93 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 3 0.00014124 83.792 By MS/MS By MS/MS 1 1 1687100 1075900 611150 2192 786 2335 4894;4895 3967;3968 3967 2075 2 SPAVATSTAAPPPPSSPLPSK MEVFLQEKSPAVATST PSSPLPSKSTSAPQMS K S P S K S 4 0 0 0 0 0 0 0 0 0 1 1 0 0 7 5 2 0 0 1 0 0 21 0 1959.0313 Q14157;F8W726 Q14157 439 459 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 2.432E-17 98.882 By MS/MS By MS/MS 2 2 81051000 47686000 33365000 2193 1096 2336 4896;4897;4898;4899 3969;3970;3971;3972;3973;3974 3970 1265;1266 6 SPAYSVSTIEPR RRESHHLRSPAYSVST SVSTIEPREDLLSPVQ R S P P R E 1 1 0 0 0 0 1 0 0 1 0 0 0 0 2 3 1 0 1 1 0 0 12 0 1305.6565 O94991 O94991 830 841 SLITRK5 SLIT and NTRK-like protein 5 yes yes 2 0.0012972 85.288 By MS/MS By matching 1 1 2143900 1088300 1055600 2194 810 2337 4900;4901 3975 3975 2390 1 SPDKPGGSPSASR REAREAARSPDKPGGS GGSPSASRRKGRASEH R S P S R R 1 1 0 1 0 0 0 2 0 0 0 1 0 0 3 4 0 0 0 0 0 0 13 1 1241.6 Q9Y3T9 Q9Y3T9 49 61 NOC2L Nucleolar complex protein 2 homolog yes yes 2 0.0025381 79.885 By MS/MS By MS/MS 2 2 5379000 2591800 2787200 2195 1507 2338 4902;4903;4904;4905 3976;3977 3976 1852;1853 2 SPESVPVDSNK LGKECKIKSPESVPVD SVPVDSNKDCTTPLEM K S P N K D 0 0 1 1 0 0 1 0 0 0 0 1 0 0 2 3 0 0 0 2 0 0 11 0 1157.5564 A0A075B754;Q96QE3 A0A075B754 86 96 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.01743 48.796 By MS/MS By matching 1 1 1964800 882820 1082000 2196 9 2339 4906;4907 3978 3978 0 SPGASNFSTLPK PRGPSTPKSPGASNFS SNFSTLPKISPSSLSN K S P P K I 1 0 1 0 0 0 0 1 0 0 1 1 0 1 2 3 1 0 0 0 0 0 12 0 1204.6088 Q9Y4E8 Q9Y4E8 229 240 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 0.015126 51.875 By MS/MS By matching 1 1 2076600 1153300 923290 2197 1510 2340 4908;4909 3979 3979 1 SPGEPGGAAPER RDGPGLERSPGEPGGA PGGAAPEREVPAAARG R S P E R E 2 1 0 0 0 0 2 3 0 0 0 0 0 0 3 1 0 0 0 0 0 0 12 0 1123.5258 Q96EB6 Q96EB6 47 58 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 2 0.010296 55.04 By MS/MS 1 501850 0 501850 2198 1328 2341 4910 3980 3980 1565 1 SPGNTSQPPAFFSK EPSRMGSKSPGNTSQP QPPAFFSKLTESNSAM K S P S K L 1 0 1 0 0 1 0 1 0 0 0 1 0 2 3 3 1 0 0 0 0 0 14 0 1463.7045 C9J7T7;C9JE98;C9J0Q5;C9JFD3;Q9Y618;H7C184 C9J7T7 1806 1819 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.0027479 63.185 By MS/MS By matching 1 1 1194900 770540 424390 2199 313 2342 4911;4912 3981 3981 379 1 SPGSPVGEGTGSPPK EKYKAKSRSPGSPVGE EGTGSPPKWQIGEQEF R S P P K W 0 0 0 0 0 0 1 4 0 0 0 1 0 0 4 3 1 0 0 1 0 0 15 0 1352.6572 E7EV99;E7ENY0;P35611;A0A0A0MSR2;H0Y9H2 E7EV99 355 369 ADD1 Alpha-adducin yes no 2 1.804E-14 115.12 By MS/MS By MS/MS 1 1 10653000 5688900 4963600 2200 404 2343 4913;4914 3982;3983 3982 454 2 SPGSTPTTPTSSQAPQK LEGERQPKSPGSTPTT TSSQAPQKLDASAAAA K S P Q K L 1 0 0 0 0 2 0 1 0 0 0 1 0 0 4 4 4 0 0 0 0 0 17 0 1670.8111 P35658 P35658 430 446 NUP214 Nuclear pore complex protein Nup214 yes yes 2 0.0039586 56.339 By matching By MS/MS 1 1 2615400 1330000 1285400 2201 952 2344 4915;4916 3984 3984 1071;2121 1 SPGVAAAVAEDGGLK MPVKKKRKSPGVAAAV VAEDGGLKKCKISRS_ K S P L K K 4 0 0 1 0 0 1 3 0 0 1 1 0 0 1 1 0 0 0 2 0 0 15 0 1340.6936 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 9 23 DCUN1D5 DCN1-like protein;DCN1-like protein 5 yes no 2 0.0017691 59.862 By MS/MS By matching 1 1 931280 441310 489970 2202 463 2345 4917;4918 3985 3985 546 1 SPGVAAAVAEDGGLKK MPVKKKRKSPGVAAAV AEDGGLKKCKISRS__ K S P K K C 4 0 0 1 0 0 1 3 0 0 1 2 0 0 1 1 0 0 0 2 0 0 16 1 1468.7886 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 9 24 DCUN1D5 DCN1-like protein;DCN1-like protein 5 yes no 2 1.3384E-05 91.789 By MS/MS By MS/MS 1 1 4581300 2630200 1951100 2203 463 2346 4919;4920 3986;3987 3987 546 2 SPPLLESPDATR SDSQQAVKSPPLLESP LESPDATRESMVKLSS K S P T R E 1 1 0 1 0 0 1 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 12 0 1281.6565 Q15036 Q15036 415 426 SNX17 Sorting nexin-17 yes yes 2 0.0086186 56.139 By matching By MS/MS 1 1 882640 425990 456640 2204 1115 2347 4921;4922 3988 3988 1301 1 SPPLPAVIR VRRPQRPRSPPLPAVI PPLPAVIRNAPSRPPS R S P I R N 1 1 0 0 0 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 9 0 948.57565 Q9Y6X9 Q9Y6X9 615 623 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 0.0056441 72.607 By MS/MS By matching 1 1 8710700 5658700 3052000 2205 1520 2348 4923;4924 3989 3989 1864 1 SPPLSPVGTTPVK KSPSGPVKSPPLSPVG PVGTTPVKLKRAAPKE K S P V K L 0 0 0 0 0 0 0 1 0 0 1 1 0 0 4 2 2 0 0 2 0 0 13 0 1278.7184 C9J4K0;Q9BVC5 C9J4K0 147 159 C2orf49 Ashwin yes no 2 0.0019411 74.133 By MS/MS By MS/MS 1 1 2284300 1277700 1006700 2206 320 2349 4925;4926 3990;3991;3992;3993;3994;3995 3994 384;1960 6 SPPPGMGLNQNR RGGLHDFRSPPPGMGL GMGLNQNRGPMGPGPG R S P N R G 0 1 2 0 0 1 0 2 0 0 1 0 1 0 3 1 0 0 0 0 0 0 12 0 1266.6139 P23246 P23246 33 44 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.0091728 55.776 By MS/MS 1 1959500 0 1959500 2207 926 2350 4927 3996 3996 1043 1 SPPREGSQGELTPANSQSR ARVDSHSKSPPREGSQ TPANSQSRMSTNM___ K S P S R M 1 2 1 0 0 2 2 2 0 0 1 0 0 0 3 4 1 0 0 0 0 0 19 1 1996.9562 J3QQX0;C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098 J3QQX0 56 74 GPS1 COP9 signalosome complex subunit 1 yes no 3 0.0040316 53.342 By MS/MS By MS/MS 1 1 2191800 1349500 842340 2208 88 2351 4928;4929 3997;3998 3998 108 2 SPPSPVER LELQSHAKSPPSPVER SPPSPVEREMVVQVER K S P E R E 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 2 0 0 0 1 0 0 8 0 867.44503 Q02952 Q02952 1328 1335 AKAP12 A-kinase anchor protein 12 yes yes 2 0.010182 82.029 By MS/MS By MS/MS 1 1 4480200 2297700 2182500 2209 1045 2352 4930;4931 3999;4000;4001 4000 1195 3 SPQETYDVYCYVDHLDGDVFHLTVPSK GVRTYGFRSPQETYDV FHLTVPSKFTFEEAAK R S P S K F 0 0 0 4 1 1 1 1 2 0 2 1 0 1 2 2 2 0 3 4 0 0 27 0 3183.4495 Q86W61;D6RGZ6;E9PF17;P13611 Q86W61 234 260 VCAN Versican core protein yes no 4 1.0553E-06 69.981 By MS/MS By MS/MS 1 1 11175000 6979000 4195600 2210 380 2353 4932;4933 4002;4003 4002 2 SPQQTVPYVVPLSPK TERQSTKRSPQQTVPY YVVPLSPKLPKTKEYA R S P P K L 0 0 0 0 0 2 0 0 0 0 1 1 0 0 4 2 1 0 1 3 0 0 15 0 1638.8981 Q9UQR0;H0Y6S1 Q9UQR0 499 513 SCML2 Sex comb on midleg-like protein 2 yes no 2 0.0023136 77.593 By MS/MS By MS/MS 1 1 1617300 955350 661900 2211 1490 2354 4934;4935 4004;4005 4004 1817;2513 2 SPSDSGYSYETIGK EKIERTTKSPSDSGYS YSYETIGKTTKTPEDG K S P G K T 0 0 0 1 0 0 1 2 0 1 0 1 0 0 1 4 1 0 2 0 0 0 14 0 1489.6573 P46821 P46821 1915 1928 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.1708E-11 110.66 By MS/MS By MS/MS 1 1 7742200 3821700 3920500 2212 968 2355 4936;4937 4006;4007 4007 1098;2125 2 SPSESFIGR PDEPLLQKSPSESFIG PSESFIGREKRSNSQS K S P G R E 0 1 0 0 0 0 1 1 0 1 0 0 0 1 1 3 0 0 0 0 0 0 9 0 978.47706 Q15139;F8WBA3 Q15139 235 243 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 2 0.019146 55.721 By matching By MS/MS 1 1 1583900 768200 815680 2213 1119 2356 4938;4939 4008 4008 1 SPSFASEWDEIEK IGKKRLEKSPSFASEW SEWDEIEKIMSSIGEG K S P E K I 1 0 0 1 0 0 3 0 0 1 0 1 0 1 1 3 0 1 0 0 0 0 13 0 1523.678 Q92625 Q92625 661 673 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2 0.0004036 84.365 By MS/MS By MS/MS 1 1 1960800 1045700 915060 2214 1305 2357 4940;4941 4009;4010 4009 1539 2 SPSFGGASEASAR GFEPQMVKSPSFGGAS GASEASARTPPQVVQP K S P A R T 3 1 0 0 0 0 1 2 0 0 0 0 0 1 1 4 0 0 0 0 0 0 13 0 1222.5578 H7C2F7;Q8WVT3 H7C2F7 15 27 TRAPPC12 Trafficking protein particle complex subunit 12 yes no 2 0.0045066 62.081 By matching By MS/MS 1 1 1667900 960170 707740 2215 678 2358 4942;4943 4011;4012 4011 801 2 SPSGHPHVR NQRGRSPRSPSGHPHV PSGHPHVRRPRSRSRD R S P V R R 0 1 0 0 0 0 0 1 2 0 0 0 0 0 2 2 0 0 0 1 0 0 9 0 972.48896 Q8WX93 Q8WX93 1104 1112 PALLD Palladin yes yes 3 0.0020094 82.417 By MS/MS 1 231860 231860 0 2216 1293 2359 4944 4013 4013 1527 1 SPSGSAFGSQENLR TIASPPERSPSGSAFG FGSQENLRWRKDMTHW R S P L R W 1 1 1 0 0 1 1 2 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1435.6692 Q96N67;A0A1B0GWE0 Q96N67 1430 1443 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 5.3598E-17 136.33 By MS/MS By MS/MS 3 3 20885000 10517000 10368000 2217 1342 2360;2361 4945;4946;4947;4948;4949;4950 4014;4015;4016;4017;4018 4015 1592;1593 5 SPSLSPSPPSPLEK SEKVSPSKSPSLSPSP SPPSPLEKTPLGERSV K S P E K T 0 0 0 0 0 0 1 0 0 0 2 1 0 0 5 5 0 0 0 0 0 0 14 0 1421.7402 P46821 P46821 1256 1269 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 2.4631E-26 144.4 By MS/MS By MS/MS 1 2 5848800 2978900 2869900 2218 968 2362 4951;4952;4953 4019;4020;4021;4022;4023 4023 1099 5 SPSPAPPPR PPPTRRRRSPSPAPPP PSPAPPPRRRRTPTPP R S P P R R 1 1 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 9 0 904.47667 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 569 577 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.012118 63.426 By MS/MS By MS/MS 1 1 1037400 1037400 0 2219 247 2363 4954;4955 4024;4025 4024 316;317 2 SPSPPTQHTGQPPGQPSAPSQLSAPR LSPKPPTRSPSPPTQH PSQLSAPRRYSSSLSP R S P P R R 2 1 0 0 0 4 0 2 1 0 1 0 0 0 8 5 2 0 0 0 0 0 26 0 2606.2837 I3L460;Q68EM7 I3L460 42 67 ARHGAP17 Rho GTPase-activating protein 17 yes no 3 0.00012685 55.718 By matching By MS/MS 1 1 6111700 3137200 2974500 2220 695 2364 4956;4957 4026;4027 4027 821 2 SPSSVTGNALWK TYVKENARSPSSVTGN VTGNALWKAMEKSSLT R S P W K A 1 0 1 0 0 0 0 1 0 0 1 1 0 0 1 3 1 1 0 1 0 0 12 0 1245.6354 Q9NYB0 Q9NYB0 154 165 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 2 0.012726 53.448 By MS/MS By matching 1 1 957350 520310 437040 2221 1440 2365 4958;4959 4028 4028 1 SPTAPSVFSPTGNR IPKQAPFRSPTAPSVF VFSPTGNRTPIPPSRT R S P N R T 1 1 1 0 0 0 0 1 0 0 0 0 0 1 3 3 2 0 0 1 0 0 14 0 1416.6997 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 229 242 NELFA Negative elongation factor A yes no 2 0.0032536 60.901 By MS/MS 1 733020 0 733020 2222 144 2366 4960 4029 4029 181 1 SPTKAPHLQLIEGK GDGRREVRSPTKAPHL HLQLIEGKKNSLRVEG R S P G K K 1 0 0 0 0 1 1 1 1 1 2 2 0 0 2 1 1 0 0 0 0 0 14 1 1517.8566 O43491;H0Y5B0;E9PK52;E9PHY5;E9PII3 O43491 598 611 EPB41L2 Band 4.1-like protein 2 yes no 3 0.0030549 59.585 By MS/MS By MS/MS 1 1 4389600 2234500 2155100 2223 783 2367 4961;4962 4030;4031 4030 914 2 SPTKSSLDYR ESQLSFRRSPTKSSLD TKSSLDYRRLPDAHSD R S P Y R R 0 1 0 1 0 0 0 0 0 0 1 1 0 0 1 3 1 0 1 0 0 0 10 1 1152.5775 Q96PK6 Q96PK6 627 636 RBM14 RNA-binding protein 14 yes yes 2 0.010704 66.326 By matching By MS/MS 1 1 3330800 1528000 1802700 2224 1345 2368 4963;4964 4032 4032 1595 1 SPTSPLNMK FIQPSAQKSPTSPLNM PTSPLNMKLGRPRIKK K S P M K L 0 0 1 0 0 0 0 0 0 0 1 1 1 0 2 2 1 0 0 0 0 0 9 0 973.49027 A0A0A0MRP6;B7ZLQ5;P28370 A0A0A0MRP6 116 124 SMARCA1 Probable global transcription activator SNF2L1 yes no 2 0.0044549 94.409 By matching By MS/MS 1 1 2667000 1215300 1451700 2225 109 2369 4965;4966 4033;4034 4034 1918 2 SPVPKSPVEEK VEKPEKAKSPVPKSPV PKSPVEEKGKSPVPKS K S P E K G 0 0 0 0 0 0 2 0 0 0 0 2 0 0 3 2 0 0 0 2 0 0 11 1 1195.6449 P07197;E7ESP9 P07197 615 625 NEFM Neurofilament medium polypeptide yes no 2;3 0.0037048 74.237 By MS/MS By MS/MS 2 1 3556500 1838800 1717700 2226 862 2370 4967;4968;4969 4035;4036;4037 4037 992 3 SPVPSPGSSSPQLQVK PLLLVGDRSPVPSPGS SSPQLQVKSSCKENPF R S P V K S 0 0 0 0 0 2 0 1 0 0 1 1 0 0 4 5 0 0 0 2 0 0 16 0 1593.8362 Q8N3F8 Q8N3F8 612 627 MICALL1 MICAL-like protein 1 yes yes 2 1.7642E-05 88.338 By MS/MS By MS/MS 1 1 5997100 3361900 2635200 2227 1253 2371 4970;4971 4038;4039 4038 1478 2 SPVSTRPLPSASQK APAAVGRRSPVSTRPL PLPSASQKAGENQEHR R S P Q K A 1 1 0 0 0 1 0 0 0 0 1 1 0 0 3 4 1 0 0 1 0 0 14 1 1453.7889 Q8ND56 Q8ND56 216 229 LSM14A Protein LSM14 homolog A yes yes 2;3 0.0056715 60.631 By MS/MS By MS/MS 2 2 92104000 50816000 41287000 2228 1265 2372 4972;4973;4974;4975 4040;4041 4040 1494 2 SPVVSGDTSPR HGAEIVYKSPVVSGDT VSGDTSPRHLSNVSST K S P P R H 0 1 0 1 0 0 0 1 0 0 0 0 0 0 2 3 1 0 0 2 0 0 11 0 1100.5462 I3L170;A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636 I3L170 296 306 MAPT Microtubule-associated protein;Microtubule-associated protein tau yes no 2 0.0045655 69.846 By matching By MS/MS 1 1 1501700 828870 672820 2229 179 2373 4976;4977 4042 4042 230;1934 0 SPYEAENSGEELDQR MSNIASVKSPYEAENS SGEELDQRYSKAKPMC K S P Q R Y 1 1 1 1 0 1 4 1 0 0 1 0 0 0 1 2 0 0 1 0 0 0 15 0 1722.7333 R4GMT1;Q9NPC7 R4GMT1 20 34 MYNN Myoneurin yes no 2 0.0033276 55.66 By MS/MS 1 525240 525240 0 2230 1413 2374 4978 4043 4043 1708 1 SQAKPGTPGGTGGPAPQY LASVQHMKSQAKPGTP TGGPAPQY________ K S Q Q Y - 2 0 0 0 0 2 0 5 0 0 0 1 0 0 4 1 2 0 1 0 0 0 18 1 1669.806 Q96L35;P54760 Q96L35 918 935 EPHB4 Receptor protein-tyrosine kinase;Ephrin type-B receptor 4 yes no 2 0.012219 47.712 By MS/MS By matching 1 1 3034600 1780100 1254500 2231 1009 2375 4979;4980 4044 4044 2433 1 SQDADSPGSSGAPENLTFK DAKEKRSKSQDADSPG APENLTFKERQRLFSQ K S Q F K E 2 0 1 2 0 1 1 2 0 0 1 1 0 1 2 4 1 0 0 0 0 0 19 0 1906.8545 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1731 1749 MLLT4 Afadin yes no 2 0.0028454 58.864 By MS/MS By matching 1 1 2647800 1435700 1212100 2232 242 2376 4981;4982 4045 4045 297 1 SQDATFSPGSEQAEKSPGPIVSR SPRRMMTRSQDATFSP SPGPIVSRTRSWDSSS R S Q S R T 2 1 0 1 0 2 2 2 0 1 0 1 0 1 3 5 1 0 0 1 0 0 23 1 2374.1401 C9J0I9;Q86WB0 C9J0I9 286 308 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.0028781 52.451 By matching By MS/MS 2 2 62925000 34936000 27988000 2233 312 2377;2378 4983;4984;4985;4986 4046;4047 4047 375;376 2 SQDSYPGSPSLSPR SLSSRSPKSQDSYPGS GSPSLSPRHGPSSSHM K S Q P R H 0 1 0 1 0 1 0 1 0 0 1 0 0 0 3 5 0 0 1 0 0 0 14 0 1476.6845 A0A0D9SEU5;R4GMX8;Q6VN20 A0A0D9SEU5 358 371 RANBP10 Ran-binding protein 10 yes no 2 0.00029582 68.944 By MS/MS By MS/MS 1 1 1593900 821180 772760 2234 167 2379 4987;4988 4048;4049 4048 212;213 1 SQDVAVSPQQQQCSK IPKRTDVKSQDVAVSP PQQQQCSKSYVDRHME K S Q S K S 1 0 0 1 1 5 0 0 0 0 0 1 0 0 1 3 0 0 0 2 0 0 15 0 1688.7788 H3BQ37;H3BPW9;Q96F86;H3BTD6 H3BQ37 125 139 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2 9.5451E-21 137.32 By MS/MS By MS/MS 1 1 8736700 5122100 3614600 2235 650 2380 4989;4990 4050;4051 4051 767 2 SQEADVQDWEFR PAQLGTQRSQEADVQD DVQDWEFRKRDSQGTY R S Q F R K 1 1 0 2 0 2 2 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 12 0 1508.6532 Q9C0C2 Q9C0C2 836 847 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 4.5037E-06 105.03 By MS/MS By MS/MS 1 1 7828600 4608600 3220000 2236 1385 2381 4991;4992 4052;4053 4052 1661 2 SQEDEISSPVNKVR ILKRGLKRSQEDEISS SSPVNKVRRVSFADPI R S Q V R R 0 1 1 1 0 1 2 0 0 1 0 1 0 0 1 3 0 0 0 2 0 0 14 1 1586.79 Q5UIP0;H7C2B5 Q5UIP0 2189 2202 RIF1 Telomere-associated protein RIF1 yes no 3 0.0021437 64.827 By matching By MS/MS 1 1 2165300 1025900 1139400 2237 1174 2382 4993;4994 4054 4054 1381 1 SQEELREDKAYQLER IAIQRVTRSQEELRED DKAYQLERHRIEAAMD R S Q E R H 1 2 0 1 0 2 4 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 15 2 1892.9228 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1234 1248 MLLT4 Afadin yes no 3 0.0044323 53.946 By MS/MS By matching 1 1 3832700 2061900 1770900 2238 242 2383 4995;4996 4055 4055 2291 1 SQETGDLDVGGLQETDKIIEVEEEQEDPYLNDR VFQACCVKSQETGDLD EDPYLNDRCRGGGPCK K S Q D R C 0 1 1 5 0 3 7 3 0 2 3 1 0 0 1 1 2 0 1 2 0 0 33 1 3762.7232 P23142 P23142 147 179 FBLN1 Fibulin-1 no no 3 0.0050233 39.923 By MS/MS 1 2318800 0 2318800 2239 925 2384 4997 4056 4056 1 SQIHDIVLVGGSTR LRDAKLDKSQIHDIVL VLVGGSTRIPKIQKLL K S Q T R I 0 1 0 1 0 1 0 2 1 2 1 0 0 0 0 2 1 0 0 2 0 0 14 0 1480.7998 E9PKE3;P11142;E9PN89;E9PNE6;A8K7Q2 E9PKE3 310 323 HSPA8 Heat shock cognate 71 kDa protein yes no 3 0.0099988 43.316 By MS/MS By matching 1 1 799850 405090 394760 2240 458 2385 4998;4999 4057 4057 1 SQQQPTPVTPK YSTRRVTRSQQQPTPV QPTPVTPKKYPLRQTR R S Q P K K 0 0 0 0 0 3 0 0 0 0 0 1 0 0 3 1 2 0 0 1 0 0 11 0 1209.6354 O95251 O95251 80 90 KAT7 Histone acetyltransferase KAT7 yes yes 2 0.0037796 87.831 By MS/MS By MS/MS 1 1 5701800 2698900 3002900 2241 816 2386 5000;5001 4058;4059 4059 2092 2 SQSESSDEVTELDLSHGKK RQRSRLLRSQSESSDE LDLSHGKKDAFVLEID R S Q K K D 0 0 0 2 0 1 3 1 1 0 2 2 0 0 0 5 1 0 0 1 0 0 19 1 2074.9655 Q86YS7 Q86YS7 657 675 C2CD5 C2 domain-containing protein 5 yes yes 3 0.012907 41.422 By matching By MS/MS 1 1 4285900 2531800 1754100 2242 1239 2387 5002;5003 4060 4060 1 SQSLPNSLDYTQTSDPGR KRTQRHGRSQSLPNSL TQTSDPGRHVMLLRAV R S Q G R H 0 1 1 2 0 2 0 1 0 0 2 0 0 0 2 4 2 0 1 0 0 0 18 0 1964.9076 H0YNE5;H0YLG5;Q96TC7 H0YNE5 44 61 RMDN3 Regulator of microtubule dynamics protein 3 yes no 2 0.011664 46.543 By MS/MS By matching 1 1 5496500 3196900 2299600 2243 625 2388 5004;5005 4061 4061 747 1 SQSLPTTLLSPVR KAGYPLRRSQSLPTTL TTLLSPVRVVSSVNVR R S Q V R V 0 1 0 0 0 1 0 0 0 0 3 0 0 0 2 3 2 0 0 1 0 0 13 0 1397.7878 E7EUL7;E9PHV5;P28290 E7EUL7 246 258 SSFA2 Sperm-specific antigen 2 yes no 2 0.0069432 56.482 By MS/MS By MS/MS 1 1 2271000 1308600 962400 2244 425 2389 5006;5007 4062;4063 4063 491;492 2 SQSMDIDGVSCEK TQSQSLSRSQSMDIDG IDGVSCEKSMSQVDVD R S Q E K S 0 0 0 2 1 1 1 1 0 1 0 1 1 0 0 3 0 0 0 1 0 0 13 0 1454.6017 O95155 O95155 103 115 UBE4B Ubiquitin conjugation factor E4 B yes yes 2 0.00075601 82.925 By MS/MS By MS/MS 1 1 4635900 2126600 2509300 2245 811 2390 5008;5009 4064;4065 4065 956 2 SQSPHYFR FIRSKIYRSQSPHYFR SQSPHYFRSGRGEGPG R S Q F R S 0 1 0 0 0 1 0 0 1 0 0 0 0 1 1 2 0 0 1 0 0 0 8 0 1020.4777 Q9UKJ3 Q9UKJ3 1033 1040 GPATCH8 G patch domain-containing protein 8 yes yes 2 0.011239 83.499 By MS/MS By MS/MS 1 1 2873800 1685200 1188600 2246 1466 2391 5010;5011 4066;4067 4067 1776 2 SQSPINCIR TTRFTTRRSQSPINCI QSPINCIRPSVLGPLK R S Q I R P 0 1 1 0 1 1 0 0 0 2 0 0 0 0 1 2 0 0 0 0 0 0 9 0 1073.5288 Q96E09 Q96E09 187 195 FAM122A Protein FAM122A yes yes 2 0.017432 58.37 By MS/MS 1 751050 751050 0 2247 1327 2392 5012 4068 4068 1 SQSSDTEQQSPTSGGGK RSSNPPARSQSSDTEQ SPTSGGGKVAPAQPSE R S Q G K V 0 0 0 1 0 3 1 3 0 0 0 1 0 0 1 5 2 0 0 0 0 0 17 0 1679.7235 E7EX17;P23588 E7EX17 500 516 EIF4B Eukaryotic translation initiation factor 4B yes no 2 6.6098E-24 133.78 By MS/MS By MS/MS 1 2 4916500 2796600 2119900 2248 431 2393 5013;5014;5015 4069;4070;4071;4072 4069 509 4 SQSSHSYDDSTLPLIDR VNLNNASRSQSSHSYD STLPLIDRNQKSDKKP R S Q D R N 0 1 0 3 0 1 0 0 1 1 2 0 0 0 1 5 1 0 1 0 0 0 17 0 1919.8861 C9JZR2;O60716;H0YC95 C9JZR2 859 875 CTNND1 Catenin delta-1 yes no 3 0.001055 73.208 By MS/MS By MS/MS 1 1 2328700 1363500 965240 2249 348 2394 5016;5017 4073;4074 4073 414;415;2322 2 SQSTTSDVPANYK KLRVKPERSQSTTSDV SDVPANYKVIKSSSDA R S Q Y K V 1 0 1 1 0 1 0 0 0 0 0 1 0 0 1 3 2 0 1 1 0 0 13 0 1396.647 Q9NU19 Q9NU19 114 126 TBC1D22B TBC1 domain family member 22B yes yes 2 0.011109 52.391 By MS/MS By matching 1 1 1481600 706060 775570 2250 1428 2395 5018;5019 4075 4075 1735 1 SQSWEER GGGREMHRSQSWEERG RSQSWEERGDRRFEKP R S Q E R G 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 7 0 920.39881 I1E4Y6;Q6Y7W6;E7ESB6 I1E4Y6 158 164 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 0.017247 111.06 By MS/MS By matching 1 1 3188500 1904400 1284100 2251 687 2396 5020;5021 4076 4076 1 SQTPPGVATPPIPK KSPGSAGRSQTPPGVA VATPPIPKITIQIPKG R S Q P K I 1 0 0 0 0 1 0 1 0 1 0 1 0 0 5 1 2 0 0 1 0 0 14 0 1388.7664 Q15648 Q15648 1049 1062 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 6.1762E-16 135.86 By MS/MS By MS/MS 1 1 7250100 3786900 3463200 2252 1129 2397 5022;5023 4077;4078 4077 2164 2 SQTSSIPQKPQTNK GQTGSGQRSQTSSIPQ PQKPQTNKSAYNSYSW R S Q N K S 0 0 1 0 0 3 0 0 0 1 0 2 0 0 2 3 2 0 0 0 0 0 14 1 1542.8002 Q14157;H0Y5H6 Q14157 1063 1076 UBAP2L Ubiquitin-associated protein 2-like yes no 2 0.018421 40.496 By MS/MS 1 167820 0 167820 2253 1096 2398 5024 4079 4079 0 SQTTTERDSDTDVEEEELPVENR QRVVLLQRSQTTTERD EELPVENREAVLKDHT R S Q N R E 0 2 1 3 0 1 6 0 0 0 1 0 0 0 1 2 4 0 0 2 0 0 23 1 2678.1791 Q14676 Q14676 445 467 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.00028143 58.565 By MS/MS By MS/MS 1 1 7028400 4440200 2588100 2254 1104 2399 5025;5026 4080;4081 4081 1280;2155;2156;2157 2 SQYHDLQAPDNQQTK FTNSLKTKSQYHDLQA APDNQQTKDIWKKVAE K S Q T K D 1 0 1 2 0 4 0 0 1 0 1 1 0 0 1 1 1 0 1 0 0 0 15 0 1771.8125 Q9H788;H0YAT1 Q9H788 129 143 SH2D4A SH2 domain-containing protein 4A yes no 3 0.016435 47.774 By MS/MS 1 0 0 0 2255 1403 2400 5027 4082 4082 1 SRDDLYDQDDSRDFPR AYMPPRSRSRDDLYDQ DDSRDFPRSRDPHYDD R S R P R S 0 3 0 6 0 1 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 0 16 2 1998.8668 S4R3V8;Q86X29 S4R3V8 482 497 LSR Lipolysis-stimulated lipoprotein receptor yes no 3 0.0008295 79.804 By MS/MS By MS/MS 1 1 6563300 3628800 2934600 2256 1234 2401 5028;5029 4083;4084 4084 2472 2 SREDLSAQPVQTK SSKRNLRKSREDLSAQ SAQPVQTKFPAYERVV K S R T K F 1 1 0 1 0 2 1 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 13 1 1457.7474 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 605 617 TJP1 Tight junction protein ZO-1 yes no 2 0.011126 57.328 By matching By MS/MS 1 1 2555500 1495700 1059900 2257 71 2402 5030;5031 4085 4085 82 1 SRESLNVDVVK PENMEKRRSRESLNVD SLNVDVVKYESGPDGG R S R V K Y 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 11 1 1244.6725 H0YG16;G3V5R9;H0YGB8;H0YJU9;H0YJL0;H0YJT3;G5E9S8;G3V2E7;F8W6L3;G3V3H3;E7EVH7;Q07866 H0YG16 152 162 KLC1 Kinesin light chain 1 yes no 2 0.017129 57.106 By MS/MS By matching 1 1 6222600 2927900 3294700 2258 619 2403 5032;5033 4086 4086 1 SRFSGGFGAR GSSRGRSKSRFSGGFG FSGGFGARDYRQSSGA K S R A R D 1 2 0 0 0 0 0 3 0 0 0 0 0 2 0 2 0 0 0 0 0 0 10 1 1040.5152 A0A0J9YVQ7 A0A0J9YVQ7 108 117 yes yes 2 0.017104 61.435 By matching By MS/MS 1 1 5827600 3138700 2689000 2259 185 2404 5034;5035 4087 4087 232 0 SRHENTSQVPLQESRTR KSSSQVNRSRHENTSQ PLQESRTRKRRGSRVS R S R T R K 0 3 1 0 0 2 2 0 1 0 1 0 0 0 1 3 2 0 0 1 0 0 17 2 2024.0148 CON__P20930;P20930 CON__P20930 274 290 FLG Filaggrin yes no 2 0.0041079 45.915 By matching By MS/MS 1 1 1996800 1204400 792380 + 2260 357 2405 5036;5037 4088 4088 22;23 1 SRNSPLLER VLSTSTNRSRNSPLLE RNSPLLERASLGQASG R S R E R A 0 2 1 0 0 0 1 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 9 1 1070.5833 E7ETY4;E9PC69;Q7KZI7 E7ETY4 449 457 MARK2 Serine/threonine-protein kinase MARK2 yes no 2 0.018846 66.538 By MS/MS 1 2394700 0 2394700 2261 423 2406 5038 4089 4089 1 SRPTSEGSDIESTEPQK TSISKMKRSRPTSEGS IESTEPQKQCSKKKKK R S R Q K Q 0 1 0 1 0 1 3 1 0 1 0 1 0 0 2 4 2 0 0 0 0 0 17 1 1846.8545 H0YA82;Q4G0J3;D6RFF0 H0YA82 35 51 LARP7 La-related protein 7 yes no 2;3 1.3788E-20 126.84 By MS/MS By MS/MS 2 2 18939000 11529000 7410600 2262 606 2407 5039;5040;5041;5042 4090;4091;4092;4093 4091 728 4 SRPTSEGSDIESTEPQKQCSK TSISKMKRSRPTSEGS EPQKQCSKKKKKRDRV R S R S K K 0 1 0 1 1 2 3 1 0 1 0 2 0 0 2 5 2 0 0 0 0 0 21 2 2350.0707 H0YA82;Q4G0J3;D6RFF0 H0YA82 35 55 LARP7 La-related protein 7 yes no 3 0.011941 49.34 By matching By MS/MS 1 1 2276300 1110400 1165900 2263 606 2408 5043;5044 4094 4094 728 1 SRSDIDVNAAAGAK SLPGSLQRSRSDIDVN VNAAAGAKAHHAAGQS R S R A K A 4 1 1 2 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 1 1373.6899 E3W994;J3KR49;A0A0U1RQI6;E7ERI8;E7EW49;O75122;B3KR06;E7ENG2 E3W994 368 381 CLASP2 CLIP-associating protein 2 yes no 2;3 2.4724E-26 145.91 By MS/MS By MS/MS 2 2 42591000 24789000 17802000 2264 195 2409 5045;5046;5047;5048 4095;4096;4097;4098 4095 246 4 SRSDIDVNAAASAK STTGSLQRSRSDIDVN VNAAASAKSKVSSSSG R S R A K S 4 1 1 2 0 0 0 0 0 1 0 1 0 0 0 3 0 0 0 1 0 0 14 1 1403.7005 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 379 392 CLASP1 CLIP-associating protein 1 yes no 3 0.0012992 75.608 By MS/MS By matching 1 1 5619900 2635300 2984600 2265 532 2410 5049;5050 4099 4099 621 1 SRSGEGEVSGLMR PHVSGVKRSRSGEGEV GEVSGLMRKVPRVSLE R S R M R K 0 2 0 0 0 0 2 3 0 0 1 0 1 0 0 3 0 0 0 1 0 0 13 1 1363.6514 M0R0K9;Q13263 M0R0K9 96 108 TRIM28 Transcription intermediary factor 1-beta yes no 3 0.00037285 93.226 By MS/MS By MS/MS 2 2 12908000 7606300 5301300 2266 746 2411;2412 5051;5052;5053;5054 4100;4101;4102 4101 113 863 3 SRSLSNSNPDISGTPTSPDDEVR PASLNLNRSRSLSNSN TSPDDEVRSIIGSKGL R S R V R S 0 2 2 3 0 0 1 1 0 1 1 0 0 0 3 6 2 0 0 1 0 0 23 1 2430.1259 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 894 916 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 0.00078712 60.133 By MS/MS By matching 1 1 2224400 1267700 956690 2267 1342 2413 5055;5056 4103 4103 1594 1 SRSPGRPPK RGSRSRSRSRSPGRPP RSPGRPPKSARRSASA R S R P K S 0 2 0 0 0 0 0 1 0 0 0 1 0 0 3 2 0 0 0 0 0 0 9 2 980.55156 C9JXK0;Q14739 C9JXK0 84 92 LBR Lamin-B receptor yes no 2 0.020156 50.484 By MS/MS 1 3238700 0 3238700 2268 344 2414 5057 4104 4104 1 SRSPLAIR LLPRKRSRSRSPLAIR SRSPLAIRRRSRSRTP R S R I R R 1 2 0 0 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 1 898.53485 Q9UQ35 Q9UQ35 2044 2051 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.017553 77.288 By MS/MS By matching 1 1 20370000 10648000 9721700 2269 1487 2415 5058;5059 4105 4105 1 SRSPLELEPEAK VLRPRNKRSRSPLELE LELEPEAKKLCAKGSD R S R A K K 1 1 0 0 0 0 3 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 12 1 1354.7092 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 24 35 DDB2 DNA damage-binding protein 2 yes no 2;3 1.5094E-08 128.22 By MS/MS By MS/MS 2 2 10297000 5630800 4666000 2270 19 2416 5060;5061;5062;5063 4106;4107;4108 4106 16;17 3 SRSPPPVSK SRSRSRSRSRSPPPVS RSPPPVSKRESKSRSR R S R S K R 0 1 0 0 0 0 0 0 0 0 0 1 0 0 3 3 0 0 0 1 0 0 9 1 953.52943 Q01130 Q01130 189 197 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 2 0.0074517 78.548 By MS/MS 1 3436900 3436900 0 2271 1038 2417 5064 4109;4110;4111 4109 1180;1181 3 SRSQPCDLDAR RGLRNLPRSRSQPCDL QPCDLDARKTGVKRRH R S R A R K 1 2 0 2 1 1 0 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 11 1 1303.5939 Q9NYF3 Q9NYF3 271 281 FAM53C Protein FAM53C yes yes 2 0.0076972 69.045 By matching By MS/MS 1 1 2336200 1350900 985230 2272 1441 2418 5065;5066 4112 4112 1748 1 SRSSDIVSSVR SYPERLVRSRSSDIVS SDIVSSVRRPMSDPSW R S R V R R 0 2 0 1 0 0 0 0 0 1 0 0 0 0 0 5 0 0 0 2 0 0 11 1 1191.6208 Q14C86;H0Y4E7;H0Y7I9;C9IZ08;F8W9S7 Q14C86 900 910 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2;3 7.3778E-06 131.08 By MS/MS By MS/MS 2 2 47795000 25901000 21893000 2273 1111 2419 5067;5068;5069;5070 4113;4114;4115;4116 4116 1296;1297;1298 4 SRTASLTSAASVDGNR SCMTRLSRSRTASLTS AASVDGNRSRSRTLSQ R S R N R S 3 2 1 1 0 0 0 1 0 0 1 0 0 0 0 4 2 0 0 1 0 0 16 1 1591.7914 G3V578;H0YJT9;A0A0A0MS87;Q9UN36 G3V578 241 256 NDRG2 Protein NDRG2 yes no 2 0.00039677 83.253 By matching By MS/MS 1 1 5765600 2992400 2773200 2274 115 2420 5071;5072 4117 4117 140;1920 1 SRTGSESSQTGTSTTSSR EETQERERSRTGSESS GTSTTSSRSKSDQDAR R S R S R S 0 2 0 0 0 1 1 2 0 0 0 0 0 0 0 7 5 0 0 0 0 0 18 1 1815.8195 E7EX17;P23588 E7EX17 418 435 EIF4B Eukaryotic translation initiation factor 4B yes no 3 0.00012713 82.449 By MS/MS 1 2988600 0 2988600 2275 431 2421 5073 4118 4118 510;1991 1 SRTHSTSSSLGSGESPFSR ASMTRLARSRTHSTSS SGESPFSRSVTSNQSD R S R S R S 0 2 0 0 0 0 1 2 1 0 1 0 0 1 1 8 2 0 0 0 0 0 19 1 1965.914 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 232 250 NDRG3 Protein NDRG3 yes no 3 0.00031434 78.78 By MS/MS By MS/MS 1 1 3634200 2278500 1355700 2276 535 2422 5074;5075 4119;4120 4120 626;627;628;2017;2018 2 SRTPLLPR PAIRRRSRSRTPLLPR SRTPLLPRKRSRSRSP R S R P R K 0 2 0 0 0 0 0 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 8 1 938.56615 Q9UQ35 Q9UQ35 2032 2039 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.011845 80.737 By MS/MS By matching 1 1 16607000 7915800 8691700 2277 1487 2423 5076;5077 4121 4121 1813 1 SRTPPSAPSQSR PPLLDRARSRTPPSAP PSAPSQSRMTSERAPS R S R S R M 1 2 0 0 0 1 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 12 1 1269.6426 Q9UQ35;I3L3Q8 Q9UQ35 2407 2418 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.00059164 92.952 By MS/MS By MS/MS 1 1 3444200 1253800 2190400 2278 1487 2424 5078;5079 4122;4123;4124 4122 1814;2236 3 SRTPSASNDDQQE EQLRSQIRSRTPSASN ASNDDQQE________ R S R Q E - 1 1 1 2 0 2 1 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 13 1 1433.6019 O43765 O43765 301 313 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 2 7.2183E-09 108.36 By MS/MS By MS/MS 1 1 16189000 7316600 8872600 2279 786 2425 5080;5081 4125;4126;4127;4128;4129 4126 918;2076 5 SRTSVQTEDDQLIAGQSAR ETEDFDVRSRTSVQTE LIAGQSARAIMAQLPQ R S R A R A 2 2 0 2 0 3 1 1 0 1 1 0 0 0 0 3 2 0 0 1 0 0 19 1 2061.0087 G3XAM7;P35221;A0A0A0MTJ6;A0A0A0MRI5;P26232 G3XAM7 652 670 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 yes no 3 0.0050923 50.957 By MS/MS By MS/MS 1 2 20040000 11193000 8846900 2280 570 2426;2427 5082;5083;5084 4130;4131 4130 668;669;2026 2 SRVSVSPGR QQSNRTRKSRVSVSPG RVSVSPGRTSGKVTKH K S R G R T 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 3 0 0 0 2 0 0 9 1 943.51993 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 421 429 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0031291 88.803 By matching By MS/MS 1 1 11487000 6260400 5226700 2281 247 2428 5085;5086 4132 4132 318;319 1 SRYSLHQNMDK FLEIVSEKSRYSLHQN SLHQNMDKIKVPTQII K S R D K I 0 1 1 1 0 1 0 0 1 0 1 1 1 0 0 2 0 0 1 0 0 0 11 1 1377.6459 Q9BV23 Q9BV23 255 265 ABHD6 Monoacylglycerol lipase ABHD6 yes yes 3 0.017227 42.21 By MS/MS 1 0 0 0 2282 1368 2429 5087 4133 4133 2492 1 SSADKIGEVSSPK KESQQHSKSSADKIGE IGEVSSPKASSKLAIM K S S P K A 1 0 0 1 0 0 1 1 0 1 0 2 0 0 1 4 0 0 0 1 0 0 13 1 1303.662 P35251 P35251 302 314 RFC1 Replication factor C subunit 1 yes yes 2 0.015918 54.023 By MS/MS 1 2455300 2455300 0 2283 947 2430 5088 4134 4134 1 SSDGSLSHEEDLAK TPSTSGKRSSDGSLSH SHEEDLAKVIELQEII R S S A K V 1 0 0 2 0 0 2 1 1 0 2 1 0 0 0 4 0 0 0 0 0 0 14 0 1473.6583 Q13136;H0YEF9;E9PJZ7 Q13136 238 251 PPFIA1 Liprin-alpha-1 yes no 2 0.0017171 72.681 By MS/MS By MS/MS 2 2 3254800 1981700 1273000 2284 1078 2431 5089;5090;5091;5092 4135;4136 4135 1240;1241;1242 2 SSDQPLTVPVSPK KYQGLEIKSSDQPLTV LTVPVSPKFSTRFHC_ K S S P K F 0 0 0 1 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 0 1353.714 Q9ULW0 Q9ULW0 728 740 TPX2 Targeting protein for Xklp2 yes yes 2 1.6306E-09 110.55 By MS/MS By MS/MS 1 1 31425000 16167000 15258000 2285 1475 2432 5093;5094 4137;4138;4139 4139 1785 3 SSEKAIQPK SKKEDLPKSSEKAIQP SEKAIQPKESNIP___ K S S P K E 1 0 0 0 0 1 1 0 0 1 0 2 0 0 1 2 0 0 0 0 0 0 9 1 986.53966 J3QSG5;F5H6S7;Q86VQ3 J3QSG5 70 78 TXNDC2 Thioredoxin domain-containing protein 2 yes no 2 0.0026708 89.886 By MS/MS 1 31189000 0 31189000 2286 503 2433 5095 4140 4140 591;592 1 SSELLGQAAR KQVLKGSRSSELLGQA ELLGQAARNMVLQEDA R S S A R N 2 1 0 0 0 1 1 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 10 0 1030.5407 A0A0B4J1R7;Q96B45 A0A0B4J1R7 45 54 C10orf32-ASMT;C10orf32 UPF0693 protein C10orf32 yes no 2 0.0060229 66.595 By MS/MS By MS/MS 1 1 1223500 724850 498660 2287 135 2434 5096;5097 4141;4142 4141 166 2 SSEPVKETVQTTQSPTPVEK NTEWETVKSSEPVKET QSPTPVEKETVVTTQA K S S E K E 0 0 0 0 0 2 3 0 0 0 0 2 0 0 3 3 4 0 0 3 0 0 20 1 2171.0958 A0A0A0MT33;Q9UPN6 A0A0A0MT33 682 701 SCAF8 Protein SCAF8 yes no 3 2.5082E-09 90.084 By MS/MS By MS/MS 1 1 5314300 2460800 2853500 2288 125 2435 5098;5099 4143;4144 4143 153;1923 2 SSEVLYERPQPTPAFSSR ASGPPVCKSSEVLYER PTPAFSSRTAGPPDPP K S S S R T 1 2 0 0 0 1 2 0 0 0 1 0 0 1 3 4 1 0 1 1 0 0 18 1 2050.012 Q96HB5 Q96HB5 393 410 CCDC120 Coiled-coil domain-containing protein 120 yes yes 3 0.010596 47.545 By matching By MS/MS 1 1 1188000 736960 451030 2289 1334 2436 5100;5101 4145 4145 2204;2486 1 SSFSHYSGLK DRHSGSDRSSFSHYSG FSHYSGLKHEDKRGGS R S S L K H 0 0 0 0 0 0 0 1 1 0 1 1 0 1 0 4 0 0 1 0 0 0 10 0 1111.5298 Q8NC51 Q8NC51 202 211 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.00013666 117.53 By MS/MS By MS/MS 1 1 7567800 3984400 3583400 2290 1264 2437 5102;5103 4146;4147 4147 1491;2475 2 SSGSGSSVADERVDYVVVDQQK STPPRKQKSSGSGSSV YVVVDQQKTLALKSTR K S S Q K T 1 1 0 3 0 2 1 2 0 0 0 1 0 0 0 5 0 0 1 5 0 0 22 1 2311.0928 B7Z3B9;Q13480 B7Z3B9 542 563 GAB1 GRB2-associated-binding protein 1 yes no 3 0.0012243 71.073 By MS/MS By matching 1 1 6341700 3789400 2552300 2291 285 2438 5104;5105 4148 4148 2304 1 SSGSPYGGGYGSGGGSGGYGSR KGGSFGGRSSGSPYGG GSGGYGSRRF______ R S S S R R 0 1 0 0 0 0 0 11 0 0 0 0 0 0 1 6 0 0 3 0 0 0 22 0 1909.7827 P51991;H7C1J8 P51991 355 376 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 2;3 0.00054994 59.339 By MS/MS By MS/MS 2 2 134300000 71813000 62483000 2292 998 2439 5106;5107;5108;5109 4149;4150;4151 4150 1144;1145 2 SSKRGASPSR STSSKSSRSSKRGASP KRGASPSRHSISEWRM R S S S R H 1 2 0 0 0 0 0 1 0 0 0 1 0 0 1 4 0 0 0 0 0 0 10 2 1031.5472 Q9BZ72 Q9BZ72 313 322 PITPNM2 Membrane-associated phosphatidylinositol transfer protein 2 yes yes 2 0.0007243 85.522 By matching By MS/MS 1 1 32611000 17727000 14884000 2293 1383 2440 5110;5111 4152 4152 1651;1652 1 SSLGSLQTPEAVTTR SPTLPAARSSLGSLQT TPEAVTTRKGTGLLSS R S S T R K 1 1 0 0 0 1 1 1 0 0 2 0 0 0 1 3 3 0 0 1 0 0 15 0 1545.7999 C9J6P4;Q7Z2W4 C9J6P4 386 400 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0022887 57.788 By matching By MS/MS 1 1 2350400 1187700 1162800 2294 323 2441 5112;5113 4153 4153 387;388 1 SSLSGDEEDELFK RPSHHSQRSSLSGDEE DEEDELFKGATLKALR R S S F K G 0 0 0 2 0 0 3 1 0 0 2 1 0 1 0 3 0 0 0 0 0 0 13 0 1454.6413 A0A0A0MT60;Q5T1M5 A0A0A0MT60 1186 1198 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 0.003129 68.626 By MS/MS 1 1470400 0 1470400 2295 127 2442 5114 4154 4154 158;159 1 SSLSTVSR NGNKEGARSSLSTVSR SSLSTVSRTLEKLKPG R S S S R T 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 4 1 0 0 1 0 0 8 0 835.43995 A6PVL3 A6PVL3 102 109 KNCN Kinocilin yes yes 2 0.010423 77.732 By MS/MS 1 282970 0 282970 2296 237 2443 5115 4155 4155 290 1 SSLYEGLEKPESR IRVVNAFRSSLYEGLE GLEKPESRSSIHNFMT R S S S R S 0 1 0 0 0 0 3 1 0 0 2 1 0 0 1 3 0 0 1 0 0 0 13 1 1493.7362 H0YHH6;A0A0U1RQU3;E7ERY9;H0Y7S3;Q01814;P20020 H0YHH6 107 119 ATP2B1;ATP2B2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2;Plasma membrane calcium-transporting ATPase 1 yes no 2;3 0.00013945 99.752 By MS/MS By MS/MS 2 2 6307700 3913800 2393800 2297 197 2444 5116;5117;5118;5119 4156;4157;4158;4159 4156 2282 4 SSMSGLHLVK DGLALHIRSSMSGLHL MSGLHLVKQGRDRKKI R S S V K Q 0 0 0 0 0 0 0 1 1 0 2 1 1 0 0 3 0 0 0 1 0 0 10 0 1057.559 A0A0C4DGT1;Q13085 A0A0C4DGT1 77 86 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 2 0.0016031 82.494 By MS/MS By MS/MS 2 2 10862000 5866300 4995400 2298 163 2445;2446 5120;5121;5122;5123 4160;4161;4162 4161 27 207 3 SSPGAVAGLSNAPGTPR GDMDGLPKSSPGAVAG SNAPGTPRDDGEMAAA K S S P R D 3 1 1 0 0 0 0 3 0 0 1 0 0 0 3 3 1 0 0 1 0 0 17 0 1537.7849 V9GYB2;U3KPY3;Q9BWG4 V9GYB2 27 43 SSBP4 Single-stranded DNA-binding protein 4 yes no 2 0.0051524 53.557 By MS/MS By MS/MS 1 1 744620 316440 428170 2299 1374 2447 5124;5125 4163;4164 4164 1637 2 SSPLGQNDNSEYVPMLPGK FSLPNPFRSSPLGQND YVPMLPGKFLGRGLDK R S S G K F 0 0 2 1 0 1 1 2 0 0 2 1 1 0 3 3 0 0 1 1 0 0 19 0 2031.9572 O14654 O14654 817 835 IRS4 Insulin receptor substrate 4 yes yes 2;3 1.4321E-07 85.163 By MS/MS By MS/MS 2 2 35321000 20589000 14732000 2300 761 2448 5126;5127;5128;5129 4165;4166;4167;4168 4165 119 2379 4 SSPNVANQPPSPGGK MKNRADHRSSPNVANQ QPPSPGGKSAYASGTT R S S G K S 1 0 2 0 0 1 0 2 0 0 0 1 0 0 4 3 0 0 0 1 0 0 15 0 1435.7056 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1131 1145 MLLT4 Afadin yes no 2 4.819E-05 93.181 By MS/MS By MS/MS 1 1 9078900 4820800 4258100 2301 242 2449 5130;5131 4169;4170;4171;4172 4169 298 4 SSPQLDPLR KTQLSQGRSSPQLDPL SPQLDPLRKSPTMEQA R S S L R K 0 1 0 1 0 1 0 0 0 0 2 0 0 0 2 2 0 0 0 0 0 0 9 0 1011.5349 Q8ND56 Q8ND56 182 190 LSM14A Protein LSM14 homolog A yes yes 2 0.0042241 80.24 By MS/MS By MS/MS 1 1 7091400 3462500 3628900 2302 1265 2450 5132;5133 4173;4174 4174 1495;1496 2 SSSADFGTFNTSQSHQTASAVSK AHFDNFPKSSSADFGT QTASAVSKVS______ K S S S K V 3 0 1 1 0 2 0 1 1 0 0 1 0 2 0 7 3 0 0 1 0 0 23 0 2344.0567 C9J2I0;B8ZZY2;P52594 C9J2I0 213 235 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 3 0.0030154 48.354 By MS/MS By matching 1 1 5613800 3192300 2421500 2303 302 2451 5134;5135 4175 4175 356;357 1 SSSEDAESLAPR VRTGKRKRSSSEDAES DAESLAPRSKVKKIIQ R S S P R S 2 1 0 1 0 0 2 0 0 0 1 0 0 0 1 4 0 0 0 0 0 0 12 0 1247.563 H0YA82;Q4G0J3 H0YA82 79 90 LARP7 La-related protein 7 yes no 2 8.6512E-06 102.33 By MS/MS By MS/MS 1 1 9415100 4736700 4678400 2304 606 2452 5136;5137 4176;4177;4178 4177 725;726;727 3 SSSELNGVSTTSVVK YKPRPVKRSSSELNGV VSTTSVVKTTGSNIPM R S S V K T 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 5 2 0 0 3 0 0 15 0 1493.7573 Q99963 Q99963 263 277 SH3GL3 Endophilin-A3 yes yes 2 0.0080406 54.951 By MS/MS By matching 2 2 10018000 5647400 4370400 2305 1360 2453;2454 5138;5139;5140;5141 4179;4180 4179 1619;1620;1621 2 SSSESYTQSFQSR ETARSHQRSSSESYTQ YTQSFQSRKPFFSWW_ R S S S R K 0 1 0 0 0 2 1 0 0 0 0 0 0 1 0 6 1 0 1 0 0 0 13 0 1492.643 Q9BTU6;E9PAM4 Q9BTU6 460 472 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes no 2 0.0030474 68.972 By matching By MS/MS 1 1 7840500 4319700 3520800 2306 1364 2455 5142;5143 4181 4181 1625;1626 1 SSSFSLPSR NGFSTMQRSSSFSLPS SSFSLPSRANVLSSPC R S S S R A 0 1 0 0 0 0 0 0 0 0 1 0 0 1 1 5 0 0 0 0 0 0 9 0 966.47706 Q14153 Q14153 165 173 FAM53B Protein FAM53B yes yes 2 0.0092674 67.993 By MS/MS By MS/MS 1 1 1912000 1076800 835240 2307 1095 2456 5144;5145 4182;4183 4182 1262 2 SSSISEEKGDSDDEKPR LSRHSPRKSSSISEEK DSDDEKPRKGERRSSR K S S P R K 0 1 0 3 0 0 3 1 0 1 0 2 0 0 1 5 0 0 0 0 0 0 17 2 1864.8286 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 148 164 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 0.00095113 79.467 By MS/MS By MS/MS 2 2 20769000 8481900 12287000 2308 412 2457 5146;5147;5148;5149 4184;4185;4186;4187;4188 4187 471 5 SSSLDMNR RPQPSHSRSSSLDMNR SSSLDMNRTFTVTTGQ R S S N R T 0 1 1 1 0 0 0 0 0 0 1 0 1 0 0 3 0 0 0 0 0 0 8 0 908.40218 E9PMG1;H0YDT0;Q96D71 E9PMG1 533 540 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 2 0.012131 89.296 By MS/MS By MS/MS 2 2 3645000 1727300 1917700 2309 467 2458 5150;5151;5152;5153 4189;4190;4191 4191 552 3 SSSLEGFHNHFK PRAFPSDRSSSLEGFH EGFHNHFKVKNVLTVG R S S F K V 0 0 1 0 0 0 1 1 2 0 1 1 0 2 0 3 0 0 0 0 0 0 12 0 1388.6473 B7Z3B9;Q13480 B7Z3B9 314 325 GAB1 GRB2-associated-binding protein 1 yes no 3 0.0081755 51.979 By MS/MS By MS/MS 1 1 3711400 2218700 1492700 2310 285 2459 5154;5155 4192;4193 4192 345 2 SSSMAAGLER TENKTLPRSSSMAAGL SMAAGLERNGRMRVKA R S S E R N 2 1 0 0 0 0 1 1 0 0 1 0 1 0 0 3 0 0 0 0 0 0 10 0 1007.4706 I3L4C2;Q9UQB8;I3L0Y9;I3L3C6;B4DWA1 I3L4C2 397 406 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 2 0.0032433 71.555 By MS/MS By MS/MS 1 1 1427800 685010 742800 2311 696 2460 5156;5157 4194;4195 4195 822;823 2 SSSMSSIDLVSASDDVHR FVQKPYSRSSSMSSID SASDDVHRFSSQVEEM R S S H R F 1 1 0 3 0 0 0 0 1 1 1 0 1 0 0 7 0 0 0 2 0 0 18 0 1891.8582 Q9Y5P4 Q9Y5P4 375 392 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 3 0.0011306 54.008 By MS/MS By matching 1 1 1040500 657690 382810 2312 1513 2461 5158;5159 4196 4196 262 1856;1857 1 SSSPAPADIAQTVQEDLR TAPEDAQKSSSPAPAD QTVQEDLRTFSWASVT K S S L R T 3 1 0 2 0 2 1 0 0 1 1 0 0 0 2 3 1 0 0 1 0 0 18 0 1883.9225 Q13283 Q13283 230 247 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 0.0056822 52.569 By matching By MS/MS 1 1 174410000 89209000 85196000 2313 1081 2462 5160;5161 4197 4197 1246;1247 1 SSSPELVTHLK FPKSDDSKSSSPELVT PELVTHLKWDDPYYDI K S S L K W 0 0 0 0 0 0 1 0 1 0 2 1 0 0 1 3 1 0 0 1 0 0 11 0 1196.6401 E9PNR6;H0YE29;Q07960 E9PNR6 49 59 ARHGAP1 Rho GTPase-activating protein 1 yes no 2 0.0014406 82.489 By matching By MS/MS 1 1 6055300 2874100 3181200 2314 470 2463 5162;5163 4198 4198 556;557 1 SSSPVQVEEEPVR TTPIGNARSSSPVQVE QVEEEPVRLASLRKAI R S S V R L 0 1 0 0 0 1 3 0 0 0 0 0 0 0 2 3 0 0 0 3 0 0 13 0 1441.7049 A0A0J9YVR0;Q8IZ21 A0A0J9YVR0 124 136 PHACTR4 Phosphatase and actin regulator 4 yes no 2 0.0043925 62.633 By MS/MS By MS/MS 1 1 14846000 7940500 6905600 2315 186 2464 5164;5165 4199;4200 4200 233;234;235 2 SSSSSSQPEHSAMLVSTAASPSLIK SHDRCLEKSSSSSSQP AASPSLIKETTTGYYK K S S I K E 3 0 0 0 0 1 1 0 1 1 2 1 1 0 2 10 1 0 0 1 0 0 25 0 2488.2115 P42166 P42166 291 315 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3 0.012159 40.142 By MS/MS By matching 1 1 991850 852750 139090 2316 960 2465 5166;5167 4201 4201 1079;1080 1 SSSTSDILEPFTVER NEEQPLPRSSSTSDIL LEPFTVERAKGAVPVI R S S E R A 0 1 0 1 0 0 2 0 0 1 1 0 0 1 1 4 2 0 0 1 0 0 15 0 1666.805 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 795 809 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 2 0.0043146 54.7 By matching By MS/MS 1 1 3224500 2069700 1154900 2317 213 2466 5168;5169 4202 4202 266;267 1 SSTAAYQPIK MHNLAASKSSTAAYQP TAAYQPIKEGRPIKSV K S S I K E 2 0 0 0 0 1 0 0 0 1 0 1 0 0 1 2 1 0 1 0 0 0 10 0 1064.5502 H0YNU5;P54132 H0YNU5 579 588 BLM Bloom syndrome protein yes no 2 0.0037758 62.166 By MS/MS 1 0 0 0 2318 633 2467 5170 4203 4203 28 2045;2360 1 SSTDSLPGPISR ERKERLMRSSTDSLPG SLPGPISRQPLGATSG R S S S R Q 0 1 0 1 0 0 0 1 0 1 1 0 0 0 2 4 1 0 0 0 0 0 12 0 1215.6095 Q9HCD5 Q9HCD5 377 388 NCOA5 Nuclear receptor coactivator 5 yes yes 2 0.007685 58.04 By MS/MS By matching 1 1 2272300 1297100 975190 2319 1409 2468 5171;5172 4204 4204 1702;1703 1 SSTLSSSSMSLSPK SGSELNSRSSTLSSSS SSMSLSPKLCAEKEAA R S S P K L 0 0 0 0 0 0 0 0 0 0 2 1 1 0 1 8 1 0 0 0 0 0 14 0 1397.6708 O15119 O15119 696 709 TBX3 T-box transcription factor TBX3 yes yes 2 0.00085827 81.992 By matching By MS/MS 1 1 1376400 684950 691430 2320 769 2469 5173;5174 4205 4205 897 1 SSTPLPTISSSAENTR REQGTESRSSTPLPTI SSSAENTRQNGSNDSD R S S T R Q 1 1 1 0 0 0 1 0 0 1 1 0 0 0 2 5 3 0 0 0 0 0 16 0 1646.8111 G5E972;P42167;H0YJH7;P42166 G5E972 158 173 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 2 0.0067696 51.727 By MS/MS By matching 1 1 68542000 35095000 33447000 2321 572;960 2470 5175;5176 4206 4206 679;680 1 SSTVTEAPIAVVTSR NAPTKRPRSSTVTEAP PIAVVTSRTSEVYVWG R S S S R T 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 3 3 0 0 3 0 0 15 0 1516.8097 Q8TD19 Q8TD19 331 345 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 2.8764E-05 95.195 By MS/MS By MS/MS 1 1 2616900 1387600 1229300 2322 1280 2471 5177;5178 4207;4208 4207 1511;1512 2 SSVLQRGAQGLGQSSAAGPQGPKGAEK GKEGQAARSSVLQRGA QGPKGAEKRYLCQQCG R S S E K R 4 1 0 0 0 4 1 6 0 0 2 2 0 0 2 4 0 0 0 1 0 0 27 2 2565.3259 A6NM28 A6NM28 124 150 ZFP92 Zinc finger protein 92 homolog yes yes 4 0.0030431 43.523 By MS/MS 1 1394600 0 1394600 2323 234 2472 5179 4209 4209 286;287 1 STAALEEDAQILK DEEFASRKSTAALEED EEDAQILKVIEAYCTS K S T L K V 3 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 13 0 1387.7195 E9PDQ5;B1ALK7;Q15052;Q14155 E9PDQ5 447 459 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 6;Rho guanine nucleotide exchange factor 7 yes no 2 0.0074475 55.899 By MS/MS By matching 1 1 737550 376490 361060 2324 253 2473 5180;5181 4210 4210 326;1947 1 STAGDTHLGGEDFDNR EDGIFEVKSTAGDTHL GGEDFDNRMVNHFIAE K S T N R M 1 1 1 3 0 0 1 3 1 0 1 0 0 1 0 1 2 0 0 0 0 0 16 0 1690.7183 E9PKE3;P11142;E9PN89;P54652 E9PKE3 202 217 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 0.00062365 73.834 By MS/MS By MS/MS 2 2 9078400 5658300 3420200 2325 458 2474 5182;5183;5184;5185 4211;4212 4212 2 STAQQELDGKPASPTPVIVASHTANKEEK GKDFQPSRSTAQQELD HTANKEEKQPDPWPLE R S T E K Q 4 0 1 1 0 2 3 1 1 1 1 3 0 0 3 3 3 0 0 2 0 0 29 2 3032.5415 H0YAC7;P35606 H0YAC7 61 89 COPB2 Coatomer subunit beta yes no 3 4.7385E-06 67.899 By MS/MS By matching 1 1 8552100 8406400 145700 2326 607 2475 5186;5187 4213 4213 729;2041 1 STDSSSVSGSLQQETK RSERRKRRSTDSSSVS GSLQQETKYILPTLEK R S T T K Y 0 0 0 1 0 2 1 1 0 0 1 1 0 0 0 6 2 0 0 1 0 0 16 0 1639.7537 Q9H8G2 Q9H8G2 89 104 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 2 0.002028 58.658 By MS/MS By matching 1 1 6787000 3354400 3432500 2327 1406 2476 5188;5189 4214 4214 1698;2222 1 STELLIR REIRRYQKSTELLIRK KSTELLIRKLPFQRLV K S T I R K 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 7 0 830.48617 K7EMV3;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431;K7EP01;Q5TEC6;Q6NXT2 K7EMV3 58 64 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2;H3F3C Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 2 1.5023E-06 144.29 By MS/MS By matching 1 1 4969000 3665200 1303800 2328 262 2477 5190;5191 4215 4215 1 STELVLSPDMPR SEKAEMKRSTELVLSP VLSPDMPRTTNESLLT R S T P R T 0 1 0 1 0 0 1 0 0 0 2 0 1 0 2 2 1 0 0 1 0 0 12 0 1343.6755 Q8TDY2 Q8TDY2 237 248 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 2 0.004787 67.952 By MS/MS By MS/MS 1 1 534820 286050 248770 2329 1281 2478;2479 5192;5193 4216;4217 4217 223 1514 2 STGGILDVYIFLGPEPK PSPALSWRSTGGILDV IFLGPEPKSVVQQYLD R S T P K S 0 0 0 1 0 0 1 3 0 2 2 1 0 1 2 1 1 0 1 1 0 0 17 0 1804.9611 P10253 P10253 332 348 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes yes 2 0.0078488 54.524 By MS/MS 1 1381200 0 1381200 2330 879 2480 5194 4218 4218 1 STGSATSLASQGER SESGMTVRSTGSATSL SLASQGERRRRTLPQL R S T E R R 2 1 0 0 0 1 1 2 0 0 1 0 0 0 0 4 2 0 0 0 0 0 14 0 1350.6375 H0Y2V6;Q5SW79 H0Y2V6 591 604 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0025848 65.219 By MS/MS By MS/MS 1 1 1714200 1104700 609520 2331 578 2481 5195;5196 4219;4220 4219 693;2033 2 STLVGHDTFTK TTEANAWKSTLVGHDT VGHDTFTKVKPSAASI K S T T K V 0 0 0 1 0 0 0 1 1 0 1 1 0 1 0 1 3 0 0 1 0 0 11 0 1204.6088 CON__Streptavidin CON__Streptavidin 123 133 yes yes 3 0.01924 41.109 By MS/MS By matching 1 1 1232700 674320 558400 + 2332 359 2482 5197;5198 4221 4221 1 STQESLTAGGTDLKR PATRVTRRSTQESLTA AGGTDLKRELHPPATS R S T K R E 1 1 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 15 1 1562.79 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 304 318 LRRC41 Leucine-rich repeat-containing protein 41 yes no 2 0.00010437 92.773 By MS/MS By MS/MS 1 1 3299400 1902300 1397200 2333 21 2483 5199;5200 4222;4223 4222 19;1891 2 STRSVENLPECGITHEQR RIPENRIRSTRSVENL CGITHEQRAGSFSTVP R S T Q R A 0 2 1 0 1 1 3 1 1 1 1 0 0 0 1 2 2 0 0 1 0 0 18 1 2112.0018 F8W860;A0A0B4J1S8;Q9UBF8 F8W860 93 110 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 0.0023375 58.246 By matching By MS/MS 1 1 4761200 2840400 1920800 2334 136 2484 5201;5202 4224 4224 167 1 STSAPQMSPGSSDNQSSSPQPAQQK PSSPLPSKSTSAPQMS SPQPAQQKLKQQKKKA K S T Q K L 2 0 1 1 0 5 0 1 0 0 0 1 1 0 4 8 1 0 0 0 0 0 25 0 2531.1194 Q14157;F8W726 Q14157 460 484 UBAP2L Ubiquitin-associated protein 2-like yes no 3 1.3184E-13 87.729 By MS/MS By MS/MS 3 2 32021000 19642000 12379000 2335 1096 2485;2486 5203;5204;5205;5206;5207 4225;4226;4227;4228 4228 199 1267;1268;1269 4 STSATDTHHVEMAR PALALRARSTSATDTH THHVEMARERSKTVTS R S T A R E 2 1 0 1 0 0 1 0 2 0 0 0 1 0 0 2 3 0 0 1 0 0 14 0 1541.6893 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874 H3BQP2 31 44 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes no 2;3 0.0039186 59.265 By MS/MS By MS/MS 2 2 10384000 6886600 3497600 2336 642 2487;2488 5208;5209;5210;5211 4229;4230 4229 104 756;2048 2 STSGGTAALGCLVK FPLAPSSKSTSGGTAA AALGCLVKDYFPEPVT K S T V K D 2 0 0 0 1 0 0 3 0 0 2 1 0 0 0 2 2 0 0 1 0 0 14 0 1320.6708 A0A0A0MS08;P01857;A0A0A0MS07;P01860 A0A0A0MS08 17 30 IGHG1;IGHG3 Ig gamma-1 chain C region;Ig gamma-3 chain C region yes no 2 0.0048266 63.624 By MS/MS 1 908790 908790 0 2337 112 2489 5212 4231 4231 1 STSPIIGSPPVR SERALPRRSTSPIIGS IIGSPPVRAVPIGTPP R S T V R A 0 1 0 0 0 0 0 1 0 2 0 0 0 0 3 3 1 0 0 1 0 0 12 0 1209.6717 Q86TB9 Q86TB9 177 188 PATL1 Protein PAT1 homolog 1 yes yes 2 0.0035869 83.883 By MS/MS By MS/MS 1 1 7134600 3666700 3467800 2338 1228 2490 5213;5214 4232;4233 4233 1442;1443;2187 1 STSPVTDPSIPIR IRKTKGNRSTSPVTDP TDPSIPIRKKSKDGKG R S T I R K 0 1 0 1 0 0 0 0 0 2 0 0 0 0 3 3 2 0 0 1 0 0 13 0 1368.7249 A0A087WU18;Q99607 A0A087WU18 186 198 ELF4 ETS-related transcription factor Elf-4 yes no 2 0.0059853 58.676 By matching By MS/MS 1 1 1296100 704880 591250 2339 25 2491 5215;5216 4234 4234 22 1 STSTPNVHMVSTTLPVDSR GSLSQRQRSTSTPNVH TTLPVDSRMIEDAIRS R S T S R M 0 1 1 1 0 0 0 0 1 0 1 0 1 0 2 4 4 0 0 3 0 0 19 0 2027.9946 H7C155;P04049 H7C155 136 154 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 3 0.012002 42.068 By MS/MS By matching 1 1 3335100 1842500 1492700 2340 675 2492 5217;5218 4235 4235 798 1 STSTPTSPGPR KPLLSVNKSTSTPTSP TPTSPGPRTHSTPSIP K S T P R T 0 1 0 0 0 0 0 1 0 0 0 0 0 0 3 3 3 0 0 0 0 0 11 0 1086.5306 H3BUF6;Q8WWM7;H3BRB0;A0A0C4DGL7 H3BUF6 684 694 ATXN2L Ataxin-2-like protein yes no 2 4.8952E-06 106.4 By MS/MS By MS/MS 2 1 9629500 6158300 3471200 2341 667 2493 5219;5220;5221 4236;4237;4238;4239;4240;4241;4242;4243 4239 788;789 8 STTSVSEEDVSSR RTVSGRYKSTTSVSEE SEEDVSSRYSRTDRSG K S T S R Y 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 5 2 0 0 2 0 0 13 0 1382.6161 Q96IZ0 Q96IZ0 228 240 PAWR PRKC apoptosis WT1 regulator protein yes yes 2 0.0074173 75.589 By MS/MS 1 0 0 0 2342 1336 2494 5222 4244 4244 1576 1 STTTPPRCSPAR VISAHQTRSTTTPPRC PPRCSPARERVPRPAP R S T A R E 1 2 0 0 1 0 0 0 0 0 0 0 0 0 3 2 3 0 0 0 0 0 12 1 1329.6459 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2163 2174 SRCAP Helicase SRCAP yes no 2 0.019411 40.751 By MS/MS By matching 1 1 1149000 488080 660900 2343 114 2495 5223;5224 4245 4245 0 STVTGERQSGDGQESTEPVENK GEEKPDTKSTVTGERQ STEPVENKVGKKGPKH K S T N K V 0 1 1 1 0 2 4 3 0 0 0 1 0 0 1 3 3 0 0 2 0 0 22 1 2334.0571 J3KSY7;O15234 J3KSY7 27 48 CASC3 Protein CASC3 yes no 3 0.0012672 59.537 By MS/MS By matching 1 1 9819700 5013100 4806600 2344 713 2496 5225;5226 4246 4246 839 1 STYTSYPK ________________ STYTSYPKAEPMPSAS K S T P K A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 2 2 0 2 0 0 0 8 0 945.44436 I3L1E3;O14964 I3L1E3 4 11 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 2 0.019598 84.916 By matching By MS/MS 1 1 1053900 420530 633410 2345 689 2497 5227;5228 4247 4247 2366 1 SVASNQSEMEFSSLQDMPK KLEDSEVRSVASNQSE SSLQDMPKELDPSAVL R S V P K E 1 0 1 1 0 2 2 0 0 0 1 1 2 1 1 5 0 0 0 1 0 0 19 0 2113.9296 A0A087X2B6;G3V119;H0YB24;Q8N163 A0A087X2B6 138 156 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 2 0.007051 50.178 By MS/MS By matching 1 1 1968400 1066400 902030 2346 81 2498 5229;5230 4248 4248 12 95 1 SVAVSDEEEVEEEAER PATPSRKRSVAVSDEE EVEEEAERRKERCKRG R S V E R R 2 1 0 1 0 0 7 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 16 0 1805.7803 Q9Y6X9 Q9Y6X9 739 754 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 0.0013865 61.435 By MS/MS By matching 1 1 2509500 1044300 1465300 2347 1520 2499 5231;5232 4249;4250 4250 1865 2 SVDAYDSYWESR PRVTKPSRSVDAYDSY YDSYWESRKPPLKASL R S V S R K 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 3 0 1 2 1 0 0 12 0 1476.6157 Q9UM82 Q9UM82 253 264 SPATA2 Spermatogenesis-associated protein 2 yes yes 2 0.0014559 81.239 By matching By MS/MS 1 1 1476400 880250 596170 2348 1476 2500 5233;5234 4251 4251 1786 1 SVDGDQGLGMEGPYEVLK VDTMLTARSVDGDQGL EGPYEVLKDSSSQENM R S V L K D 0 0 0 2 0 1 2 4 0 0 2 1 1 0 1 1 0 0 1 2 0 0 18 0 1892.8826 Q9NWQ8 Q9NWQ8 150 167 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 0.010363 40.066 By MS/MS By matching 1 1 1659700 780960 878790 2349 1434 2501 5235;5236 4252 4252 248 2502 1 SVENLPECGITHEQR ENRIRSTRSVENLPEC CGITHEQRAGSFSTVP R S V Q R A 0 1 1 0 1 1 3 1 1 1 1 0 0 0 1 1 1 0 0 1 0 0 15 0 1767.821 F8W860;A0A0B4J1S8;Q9UBF8 F8W860 96 110 PI4KB Phosphatidylinositol 4-kinase beta yes no 2;3 1.0719E-05 96.143 By MS/MS By matching 2 2 26628000 12065000 14562000 2350 136 2502 5237;5238;5239;5240 4253;4254 4254 167 2 SVICDISPLR GGSLSERRSVICDISP ICDISPLRQIVRDPGA R S V L R Q 0 1 0 1 1 0 0 0 0 2 1 0 0 0 1 2 0 0 0 1 0 0 10 0 1158.6067 Q9UGU0 Q9UGU0 865 874 TCF20 Transcription factor 20 yes yes 2 0.00017731 96.229 By matching By MS/MS 1 1 853550 516410 337150 2351 1455 2503 5241;5242 4255 4255 1760 1 SVKEDSNLTLQEK PDKMKKSKSVKEDSNL SNLTLQEKKEKIQTGL K S V E K K 0 0 1 1 0 1 2 0 0 0 2 2 0 0 0 2 1 0 0 1 0 0 13 1 1489.7624 H0YLE8;P46940 H0YLE8 871 883 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 1.0865E-11 136.33 By MS/MS By matching 1 1 7219000 3992200 3226800 2352 624 2504 5243;5244 4256 4256 746 1 SVKTSPTTQSK SNSSPIGKSVKTSPTT TSPTTQSKHNTTSAKG K S V S K H 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 3 3 0 0 1 0 0 11 1 1162.6194 Q5UIP0;H7C2B5 Q5UIP0 2239 2249 RIF1 Telomere-associated protein RIF1 yes no 2 0.0052829 71.806 By MS/MS 1 597650 0 597650 2353 1174 2505 5245 4257 4257 1382 1 SVLGQLGITK ITGTYDLKSVLGQLGI LGQLGITKVFSNGADL K S V T K V 0 0 0 0 0 1 0 2 0 1 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1014.6073 P01009;A0A0G2JRN3;A0A024R6I7 P01009 325 334 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.014215 64.841 By MS/MS By matching 1 1 2757900 2350400 407510 2354 836 2506 5246;5247 4258 4258 1 SVNEILGLAESSPNEPK DLEKDIEKSVNEILGL ESSPNEPKAATLAVPP K S V P K A 1 0 2 0 0 0 3 1 0 1 2 1 0 0 2 3 0 0 0 1 0 0 17 0 1782.9 Q9H8G2 Q9H8G2 301 317 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 3 0.00092636 68.173 By matching By MS/MS 1 1 560440 296970 263470 2355 1406 2507 5248;5249 4259 4259 1699;1700 1 SVNGGPGSPDLAR SPSMGRYRSVNGGPGS PGSPDLARHYKSSSPL R S V A R H 1 1 1 1 0 0 0 3 0 0 1 0 0 0 2 2 0 0 0 1 0 0 13 0 1225.6051 A0A087X2C4;H0YAH0;O60245 A0A087X2C4 297 309 PCDH7 Protocadherin-7 yes no 2 0.00034118 86.539 By MS/MS By MS/MS 2 2 5030000 2454500 2575500 2356 82 2508;2509 5250;5251;5252;5253 4260;4261;4262 4260 96 3 SVPGTTSSPLVGDISPK SVSQDFSRSVPGTTSS LVGDISPKSSPHEVKF R S V P K S 0 0 0 1 0 0 0 2 0 1 1 1 0 0 3 4 2 0 0 2 0 0 17 0 1640.8621 Q9UQR0;H0Y6S1 Q9UQR0 576 592 SCML2 Sex comb on midleg-like protein 2 yes no 2 1.8742E-06 92.31 By MS/MS By MS/MS 1 1 7720700 4067000 3653700 2357 1490 2510 5254;5255 4263;4264 4263 1818 2 SVQEGENPDDGVR MSKRKRKRSVQEGENP ENPDDGVRGSPPEDYR R S V V R G 0 1 1 2 0 1 2 2 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 0 1400.6168 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 17 29 RBM34 RNA-binding protein 34 yes no 2 0.00029929 95.981 By MS/MS By MS/MS 1 1 5197800 2953500 2244300 2358 224 2511 5256;5257 4265;4266;4267 4265 278 3 SVSEINSDDELSGK SVQSLDSRSVSEINSD SDDELSGKGYALVPII R S V G K G 0 0 1 2 0 0 2 1 0 1 1 1 0 0 0 4 0 0 0 1 0 0 14 0 1478.6736 F8WF45;P82094 F8WF45 338 351 TMF1 TATA element modulatory factor yes no 2 0.0011835 80.719 By MS/MS By matching 1 1 8725200 4880800 3844400 2359 543 2512 5258;5259 4268;4269 4269 637 2 SVSLTGAPESVQK DSGGLPERSVSLTGAP GAPESVQKAKMMLDDI R S V Q K A 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 3 1 0 0 2 0 0 13 0 1301.6827 M0QXW7;M0QYH3;A0A087WTP3;Q92945;M0R0I5 M0QXW7 47 59 KHSRP Far upstream element-binding protein 2 yes no 2 0.010916 52.576 By matching By MS/MS 1 1 982970 520430 462530 2360 18 2513 5260;5261 4270 4270 14 1 SVSPPPKR PVPPSKARSVSPPPKR SVSPPPKRATSRSRSR R S V K R A 0 1 0 0 0 0 0 0 0 0 0 1 0 0 3 2 0 0 0 1 0 0 8 1 866.4974 Q13247 Q13247 314 321 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 2 0.019596 58.592 By matching By MS/MS 1 1 3523500 1938400 1585100 2361 1080 2514 5262;5263 4271 4271 1 SVSPTFLNPSDENLK CLNVQSQRSVSPTFLN NPSDENLKTLCNFAGD R S V L K T 0 0 2 1 0 0 1 0 0 0 2 1 0 1 2 3 1 0 0 1 0 0 15 0 1646.8152 Q9UKA4 Q9UKA4 1240 1254 AKAP11 A-kinase anchor protein 11 yes yes 2 0.013797 46.592 By MS/MS By matching 1 1 3874400 2119100 1755300 2362 1463 2515 5264;5265 4272 4272 1 SVSSFPVPQDNVDTHPGSGK ISRAATRRSVSSFPVP DTHPGSGKEVRVPATA R S V G K E 0 0 1 2 0 1 0 2 1 0 0 1 0 1 3 4 1 0 0 3 0 0 20 0 2053.9705 C9JAY7;E7EVC7;Q676U5 C9JAY7 124 143 ATG16L1 Autophagy-related protein 16-1 yes no 3 0.0017067 64.589 By MS/MS By matching 1 1 5737000 3370600 2366400 2363 327 2516 5266;5267 4273 4273 391 1 SVSSNVASVSPIPAGSK GSPRTPNRSVSSNVAS SPIPAGSKKIDPNMKA R S V S K K 2 0 1 0 0 0 0 1 0 1 0 1 0 0 2 6 0 0 0 3 0 0 17 0 1585.8312 E9PHI6;Q9Y6G9 E9PHI6 296 312 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 0.0056329 52.93 By matching By MS/MS 1 1 5047900 2810900 2237000 2364 448 2517 5268;5269 4274 4274 525 1 SVSSVLSSLTPAK PPKPDPVKSVSSVLSS LSSLTPAKVAPVINNG K S V A K V 1 0 0 0 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 2 0 0 13 0 1274.7082 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 347 359 MTA1 Metastasis-associated protein MTA1 yes no 2 0.0085352 75.294 By matching By MS/MS 1 1 628830 319370 309460 2365 419 2518 5270;5271 4275 4275 1983 1 SVSSYGNIR SPCTPRLRSVSSYGNI VSSYGNIRAVATARSL R S V I R A 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 3 0 0 1 1 0 0 9 0 981.48796 Q8N122 Q8N122 719 727 RPTOR Regulatory-associated protein of mTOR yes yes 2 0.0048981 73.841 By MS/MS By MS/MS 1 1 2938800 1586800 1352000 2366 1248 2519 5272;5273 4276;4277 4277 1473 2 SVSTPSEAGSQDSGDGAVGSR PPMSPSSKSVSTPSEA GDGAVGSRTLHW____ K S V S R T 2 1 0 2 0 1 1 4 0 0 0 0 0 0 1 6 1 0 0 2 0 0 21 0 1949.8563 E9PGG1;E7EUM4;E7ERR6;E7ERH4;E7ET01;E7ETL8;E7EQU2;E7ESD3;E7EMU4;E7EV09;E7EQL5;Q13409 E9PGG1 86 106 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 2 0.0079339 48.177 By matching By MS/MS 1 1 1554300 916960 637330 2367 401 2520 5274;5275 4278 4278 449 1 SVTDYAQQNPAAQIPAR ETEQRAPKSVTDYAQQ PAAQIPARQREIEMNR K S V A R Q 4 1 1 1 0 3 0 0 0 1 0 0 0 0 2 1 1 0 1 1 0 0 17 0 1828.9068 A0A0A0MRM8 A0A0A0MRM8 1110 1126 MYO6 yes yes 2;3 0.0016879 62.408 By MS/MS By MS/MS 2 2 5621000 2683300 2937600 2368 105 2521 5276;5277;5278;5279 4279;4280;4281 4280 130;1913;2267 3 SVTEQGAELSNEER DDMAACMKSVTEQGAE AELSNEERNLLSVAYK K S V E R N 1 1 1 0 0 1 4 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 14 0 1547.7063 E7EX29;P63104;E5RGE1;E5RIR4;E9PD24;E7EVZ2;E7ESK7 E7EX29 28 41 YWHAZ 14-3-3 protein zeta/delta yes no 2 0.0036378 71.085 By MS/MS By matching 1 1 3166600 1831500 1335100 2369 432 2522 5280;5281 4282 4282 1 SVVSDLEADDVK NKELKPQKSVVSDLEA DLEADDVKGSVPLSSS K S V V K G 1 0 0 3 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 12 0 1275.6194 P11388 P11388 1374 1385 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.00359 70.438 By MS/MS By MS/MS 2 2 11220000 5325000 5895000 2370 888 2523 5282;5283;5284;5285 4283;4284;4285;4286 4286 1012;1013 4 SVWGSLAVQNSPK MLDAATGKSVWGSLAV LAVQNSPKGCHRDKRT K S V P K G 1 0 1 0 0 1 0 1 0 0 1 1 0 0 1 3 0 1 0 2 0 0 13 0 1371.7147 P18615 P18615 343 355 NELFE Negative elongation factor E yes yes 2 0.000525 83.869 By MS/MS By MS/MS 1 1 2372300 1354200 1018000 2371 910 2524 5286;5287 4287;4288 4287 1033;1034 2 SVYAHFPINVVIQENGSLVEIR LGFRYKMRSVYAHFPI NGSLVEIRNFLGEKYI R S V I R N 1 1 2 0 0 1 2 1 1 3 1 0 0 1 1 2 0 0 1 4 0 0 22 0 2483.3173 D6RAN4;H0Y9V9;P32969;E7ESE0 D6RAN4 94 115 RPL9 60S ribosomal protein L9 yes no 3 4.7413E-15 95.195 By MS/MS By MS/MS 2 2 25432000 13998000 11434000 2372 368 2525;2526 5288;5289;5290;5291 4289;4290;4291;4292 4292 2 4 SVYITFSDYESVQGLPAFR VFPSDFCRSVYITFSD VQGLPAFRYKVPAEIL R S V F R Y 1 1 0 1 0 1 1 1 0 1 1 0 0 2 1 3 1 0 2 2 0 0 19 0 2178.0633 Q14108 Q14108 276 294 SCARB2 Lysosome membrane protein 2 yes yes 2 7.2516E-05 83.204 By MS/MS By MS/MS 1 1 7236100 3770800 3465200 2373 1092 2527 5292;5293 4293;4294 4294 2 SWDSSSPVDRPEPEAASPTTR GPIVSRTRSWDSSSPV EAASPTTRTRPVTRSM R S W T R T 2 2 0 2 0 0 2 0 0 0 0 0 0 0 4 5 2 1 0 1 0 0 21 1 2271.0404 C9J0I9;Q86WB0 C9J0I9 311 331 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.0017829 62.765 By MS/MS 1 7158100 7158100 0 2374 312 2528 5294 4295;4296 4296 377 2 SWGQQAQEYQEQK FSQEVSRRSWGQQAQE AQEYQEQKQRSSSKDG R S W Q K Q 1 0 0 0 0 5 2 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 13 0 1608.7168 Q5VZK9 Q5VZK9 1331 1343 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 2 0.00054037 89.827 By MS/MS By matching 1 1 2472400 1517300 955060 2375 1179 2529 5295;5296 4297 4297 1388 1 SWLSPRVSPPASPGP PGNPSRARSWLSPRVS SPPASPGP________ R S W G P - 1 1 0 0 0 0 0 1 0 0 1 0 0 0 5 4 0 1 0 1 0 0 15 1 1533.794 A0A0C4DGU2;Q9Y4U1 A0A0C4DGU2 211 225 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes no 2 0.0021762 61.649 By MS/MS By MS/MS 1 1 1329400 772150 557250 2376 165 2530 5297;5298 4298;4299 4299 209;210 2 SWSASDPFYTNDR CSPTHISRSWSASDPF DPFYTNDRSILTLSTM R S W D R S 1 1 1 2 0 0 0 0 0 0 0 0 0 1 1 3 1 1 1 0 0 0 13 0 1544.6532 Q9Y2G3 Q9Y2G3 1152 1164 ATP11B Probable phospholipid-transporting ATPase IF yes yes 2 0.0052121 60.448 By MS/MS By matching 1 1 968480 488950 479530 2377 1496 2531 5299;5300 4300 4300 1830 1 SYCYYFNEDR PEGTNAYRSYCYYFNE CYYFNEDRETWVDADL R S Y D R E 0 1 1 1 1 0 1 0 0 0 0 0 0 1 0 1 0 0 3 0 0 0 10 0 1415.5452 P05451 P05451 45 54 REG1A Lithostathine-1-alpha yes yes 2 0.00079667 89.698 By MS/MS By matching 1 1 1306700 848590 458150 2378 855 2532 5301;5302 4301 4301 1 SYEAYVLNIVR SFRPNDPKSYEAYVLN AYVLNIVRFLEKYKDS K S Y V R F 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 2 2 0 0 11 0 1325.698 V9GYR2;P05026 V9GYR2 41 51 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 2 0.0051643 72.23 By MS/MS By MS/MS 1 1 2028700 1297500 731140 2379 853 2533 5303;5304 4302;4303 4303 2 SYGIPFIETSAK KQAQDLARSYGIPFIE PFIETSAKTRQRVEDA R S Y A K T 1 0 0 0 0 0 1 1 0 2 0 1 0 1 1 2 1 0 1 0 0 0 12 0 1311.6711 P01116;P01111 P01116 136 147 KRAS;NRAS GTPase KRas;GTPase KRas, N-terminally processed;GTPase NRas yes no 2 0.0017268 64.711 By MS/MS 1 5467300 5467300 0 2380 839 2534 5305 4304 4304 980;981;2096 1 SYLEGSSDNQLK SSQSKGNKSYLEGSSD GSSDNQLKDSESTPVD K S Y L K D 0 0 1 1 0 1 1 1 0 0 2 1 0 0 0 3 0 0 1 0 0 0 12 0 1339.6256 E9PJ60;Q9UHI6 E9PJ60 280 291 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.00073208 88.338 By matching By MS/MS 1 1 796750 386240 410520 2381 454 2535 5306;5307 4305 4305 529;530 1 SYLIVHQR CGKSFRTKSYLIVHQR SYLIVHQRTHTGEKPY K S Y Q R T 0 1 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 1 1 0 0 8 0 1014.5611 Q9P2J8;Q14587 Q9P2J8 653 660 ZNF624;ZNF268 Zinc finger protein 624;Zinc finger protein 268 yes no 3 0.017678 44.447 By MS/MS 1 0 0 0 2382 1102 2536 5308 4306 4306 2455 1 SYPLDLEGGSEYK LSSYDSDRSYPLDLEG LEGGSEYKYTPPTQPP R S Y Y K Y 0 0 0 1 0 0 2 2 0 0 2 1 0 0 1 2 0 0 2 0 0 0 13 0 1456.6722 B7Z4K4;Q9UET6 B7Z4K4 112 124 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase yes no 2 0.0068118 56.783 By MS/MS 1 390810 0 390810 2383 286 2537 5309 4307 4307 346 1 SYSAGNASQLEQLSR NVCGVRKRSYSAGNAS SQLEQLSRARRSGGEL R S Y S R A 2 1 1 0 0 2 1 1 0 0 2 0 0 0 0 4 0 0 1 0 0 0 15 0 1609.7696 Q14678 Q14678 323 337 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 2 0.00020208 84.41 By MS/MS By MS/MS 1 1 4466000 2672000 1793900 2384 1105 2538 5310;5311 4308;4309 4309 1281;1282 2 SYSHDVLPK SSLYNLPRSYSHDVLP YSHDVLPKVSPSSTEA R S Y P K V 0 0 0 1 0 0 0 0 1 0 1 1 0 0 1 2 0 0 1 1 0 0 9 0 1044.524 B7Z3B9;Q13480 B7Z3B9 161 169 GAB1 GRB2-associated-binding protein 1 yes no 2 0.018359 64.82 By MS/MS 1 0 0 0 2385 285 2539 5312 4310 4310 1 SYSPDGKESPSDK KKDKSRKRSYSPDGKE GKESPSDKKSKTDGSQ R S Y D K K 0 0 0 2 0 0 1 1 0 0 0 2 0 0 2 4 0 0 1 0 0 0 13 1 1395.6154 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87 D6REM6 596 608 MATR3 Matrin-3 yes no 2 0.014872 62.633 By MS/MS 1 0 0 0 2386 191 2540 5313 4311 4311 240;241 1 SYSPDGKESPSDKK KKDKSRKRSYSPDGKE KESPSDKKSKTDGSQK R S Y K K S 0 0 0 2 0 0 1 1 0 0 0 3 0 0 2 4 0 0 1 0 0 0 14 2 1523.7104 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87 D6REM6 596 609 MATR3 Matrin-3 yes no 2;3 4.4256E-35 151.59 By MS/MS By MS/MS 3 4 78385000 38345000 40040000 2387 191 2541;2542 5314;5315;5316;5317;5318;5319;5320 4312;4313;4314;4315;4316;4317;4318;4319;4320;4321;4322 4318 240;241 11 SYTLVVAK PPWLKKQKSYTLVVAK SYTLVVAKDGGDKKEP K S Y A K D 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 8 0 879.50657 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 87 94 EPB41L2 Band 4.1-like protein 2 yes no 2 4.7381E-14 153.73 By MS/MS By MS/MS 2 2 8160300 5022000 3138300 2388 783 2543 5321;5322;5323;5324 4323;4324;4325 4323 913;2389 3 SYYYAISDFAVGGR FNDPKVLKSYYYAISD SDFAVGGRCKCNGHAS K S Y G R C 2 1 0 1 0 0 0 2 0 1 0 0 0 1 0 2 0 0 3 1 0 0 14 0 1567.7307 P11047 P11047 272 285 LAMC1 Laminin subunit gamma-1 yes yes 2 0.0087056 56.359 By MS/MS By matching 1 1 970360 512020 458350 2389 885 2544 5325;5326 4326 4326 1 TAADVVSPGANSVDSR TEKVKDPKTAADVVSP GANSVDSRVQRPKEES K T A S R V 3 1 1 2 0 0 0 1 0 0 0 0 0 0 1 3 1 0 0 3 0 0 16 0 1544.7431 Q01804 Q01804 1000 1015 OTUD4 OTU domain-containing protein 4 yes yes 2 1.043E-19 114.96 By MS/MS By MS/MS 1 1 5150900 2883500 2267400 2390 1041 2545 5327;5328 4327;4328 4327 1185 2 TADSVFCPHYEK SDIIIPLRTADSVFCP VFCPHYEKVSGDYGHP R T A E K V 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 1 0 1 1 0 0 12 0 1452.6344 P52799 P52799 295 306 EFNB2 Ephrin-B2 yes yes 2 1.3102E-08 114.89 By MS/MS By matching 1 1 1869600 1003400 866170 2391 1001 2546 5329;5330 4329 4329 2431 1 TAFISDFAVTADGNAFIGDIK AFDLEIPKTAFISDFA NAFIGDIKDKVTAWKQ K T A I K D 4 0 1 3 0 0 0 2 0 3 0 1 0 3 0 1 2 0 0 1 0 0 21 0 2172.0739 P19827;F8WAS2 P19827 94 114 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 2 1.1085E-14 95.236 By MS/MS By MS/MS 1 1 25626000 18790000 6835900 2392 917 2547 5331;5332 4330;4331 4330 2 TAFQEALDAAGDK MVKQIESKTAFQEALD ALDAAGDKLVVVDFSA K T A D K L 4 0 0 2 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 13 0 1335.6307 P10599 P10599 9 21 TXN Thioredoxin yes yes 2 0.00448 71.221 By MS/MS By MS/MS 1 1 1519500 732370 787130 2393 882 2548 5333;5334 4332;4333 4332 2 TAFYLAEFFVNEAR SHAPNAVKTAFYLAEF EFFVNEARKNNHHFKS K T A A R K 3 1 1 0 0 0 2 0 0 0 1 0 0 3 0 0 1 0 1 1 0 0 14 0 1676.8199 Q92820 Q92820 267 280 GGH Gamma-glutamyl hydrolase yes yes 2 0.0049266 62.924 By matching By MS/MS 1 1 2060700 1257300 803480 2394 1314 2549 5335;5336 4334 4334 1 TAFYNEDDSEEEQR RTRNQGRRTAFYNEDD DDSEEEQRQLLFEDTS R T A Q R Q 1 1 1 2 0 1 4 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 14 0 1731.686 Q8WWQ0 Q8WWQ0 1775 1788 PHIP PH-interacting protein yes yes 2 0.008536 52.576 By matching By MS/MS 1 1 8198900 4324800 3874200 2395 1292 2550 5337;5338 4335 4335 1525 1 TAHNSEADLEESFNEHELEPSSPKSK VYCRKHKKTAHNSEAD EPSSPKSKKKSRKGRP K T A S K K 2 0 2 1 0 0 6 0 2 0 2 2 0 1 2 5 1 0 0 0 0 0 26 1 2911.3108 Q8IWS0 Q8IWS0 134 159 PHF6 PHD finger protein 6 yes yes 4 0.0034942 43.895 By MS/MS By matching 1 1 5620500 3395800 2224700 2396 1243 2551 5339;5340 4336 4336 1467;1468;1469 1 TALPAQSAATLPAR PTSDRKAKTALPAQSA SAATLPARTQETPSAQ K T A A R T 5 1 0 0 0 1 0 0 0 0 2 0 0 0 2 1 2 0 0 0 0 0 14 0 1366.7569 A0A087WUZ3;Q01082 A0A087WUZ3 2180 2193 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.0095383 69.878 By matching By MS/MS 1 1 23229000 13026000 10203000 2397 32 2552 5341;5342 4337 4337 1897 1 TALSSTESCTMKGEEKSPK MAKDLSSKTALSSTES KGEEKSPKTKKDKRPP K T A P K T 1 0 0 0 1 0 3 1 0 0 1 3 1 0 1 4 3 0 0 0 0 0 19 2 2069.9609 Q96T23;H0YER1;H0YCN2 Q96T23 554 572 RSF1 Remodeling and spacing factor 1 yes no 3 0.0043139 49.463 By MS/MS By MS/MS 2 2 6184900 4115500 2069500 2398 1352 2553;2554 5343;5344;5345;5346 4338;4339 4339 238 1606 2 TAPTLSPEHWK SGPPELRKTAPTLSPE TLSPEHWKAVPPVSPE K T A W K A 1 0 0 0 0 0 1 0 1 0 1 1 0 0 2 1 2 1 0 0 0 0 11 0 1265.6404 Q96JM3 Q96JM3 400 410 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0034472 71.176 By MS/MS By matching 1 1 4363200 2377600 1985600 2399 1338 2555 5347;5348 4340 4340 1587 1 TAQVPSPPR ITIDDPVRTAQVPSPP AQVPSPPRGKISNIVH R T A P R G 1 1 0 0 0 1 0 0 0 0 0 0 0 0 3 1 1 0 0 1 0 0 9 0 951.51378 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 949 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 3.5964E-05 129 By MS/MS By MS/MS 1 1 16489000 9569400 6919200 2400 412 2556 5349;5350 4341;4342;4343;4344;4345;4346;4347;4348;4349;4350 4347 472 10 TAQVPSPPRGK ITIDDPVRTAQVPSPP VPSPPRGKISNIVHIS R T A G K I 1 1 0 0 0 1 0 1 0 0 0 1 0 0 3 1 1 0 0 1 0 0 11 1 1136.6302 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 951 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 0.0011776 96.23 By MS/MS By MS/MS 2 2 10212000 6129900 4082200 2401 412 2557 5351;5352;5353;5354 4351;4352;4353;4354 4353 472 4 TASESISNLSEAGSIK PPISNLTKTASESISN LSEAGSIKKGERELKI K T A I K K 2 0 1 0 0 0 2 1 0 2 1 1 0 0 0 5 1 0 0 0 0 0 16 0 1592.7893 F5H1T5;F6VGP8;F5H6A0;J3KP58;P30622 F5H1T5 191 206 CLIP1 CAP-Gly domain-containing linker protein 1 yes no 2 2.2855E-07 98.573 By matching By MS/MS 2 2 6524100 4005300 2518800 2402 496 2558 5355;5356;5357;5358 4355;4356 4355 586 2 TASFSESR TSTPAPSRTASFSESR TASFSESRADEVAPAK R T A S R A 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 3 1 0 0 0 0 0 8 0 883.40356 P53396 P53396 453 460 ACLY ATP-citrate synthase yes yes 2 0.0094365 95.775 By MS/MS By MS/MS 1 2 17946000 7515300 10430000 2403 1004 2559 5359;5360;5361 4357;4358;4359;4360;4361;4362;4363 4358 1153;1154 7 TASFSESRADEVAPAK TSTPAPSRTASFSESR ADEVAPAKKAKPAMPQ R T A A K K 4 1 0 1 0 0 2 0 0 0 0 1 0 1 1 3 1 0 0 1 0 0 16 1 1664.8006 P53396 P53396 453 468 ACLY ATP-citrate synthase yes yes 2;3 0.001256 70.334 By MS/MS By MS/MS 2 2 40312000 23154000 17158000 2404 1004 2560 5362;5363;5364;5365 4364;4365;4366 4365 1153;1154 3 TASFSESRADEVAPAKK TSTPAPSRTASFSESR DEVAPAKKAKPAMPQD R T A K K A 4 1 0 1 0 0 2 0 0 0 0 2 0 1 1 3 1 0 0 1 0 0 17 2 1792.8955 P53396 P53396 453 469 ACLY ATP-citrate synthase yes yes 3 0.0013455 78.456 By MS/MS By matching 1 1 118850000 88365000 30489000 2405 1004 2561 5366;5367 4367 4367 1153;1154 1 TASGSSVTSLDGTR MTRLMRSRTASGSSVT VTSLDGTRSRSHTSEG R T A T R S 1 1 0 1 0 0 0 2 0 0 1 0 0 0 0 4 3 0 0 1 0 0 14 0 1337.6423 E5RJY1;E7ESM1;Q92597 E5RJY1 37 50 NDRG1 Protein NDRG1 yes no 2 1.3542E-13 115.91 By MS/MS By MS/MS 2 1 16910000 9024100 7886400 2406 397 2562;2563 5368;5369;5370 4368;4369;4370 4369 447 2 TASLPGYGR ASHIPSSKTASLPGYG ASLPGYGRNGLHRPVS K T A G R N 1 1 0 0 0 0 0 2 0 0 1 0 0 0 1 1 1 0 1 0 0 0 9 0 920.47158 J3QSX6;F8W8M4;A0A0A0MRL6;O14639 J3QSX6 276 284 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.0038406 81.771 By MS/MS By MS/MS 1 1 5718300 3209200 2509100 2407 104 2564 5371;5372 4371;4372 4371 128 2 TASLTSAASVDGNR MTRLSRSRTASLTSAA AASVDGNRSRSRTLSQ R T A N R S 3 1 1 1 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 0 0 14 0 1348.6583 G3V578;H0YJT9;A0A0A0MS87;Q9UN36 G3V578 243 256 NDRG2 Protein NDRG2 yes no 2 0.00017284 94.673 By MS/MS By MS/MS 1 1 12068000 6055700 6012400 2408 115 2565 5373;5374 4373;4374 4374 140;1920 2 TASPPPPPK PSPPPKRRTASPPPPP ASPPPPPKRRASPSPP R T A P K R 1 0 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 9 0 890.48617 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 623 631 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 5.0064E-05 103.31 By MS/MS By MS/MS 1 1 3322800 1867900 1454900 2409 247 2566 5375;5376 4375;4376;4377;4378;4379 4378 320;1946 5 TASPPPPPKR PSPPPKRRTASPPPPP SPPPPPKRRASPSPPP R T A K R R 1 1 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 10 1 1046.5873 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 623 632 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.003676 77.387 By MS/MS By MS/MS 2 1 7421200 3835900 3585300 2410 247 2567 5377;5378;5379 4380;4381;4382 4380 320;1946 3 TATCHSSSSPPIDAASAEPYGFR STSAVKEKTATCHSSS SAEPYGFRASVLFDTM K T A F R A 4 1 0 1 1 0 1 1 1 1 0 0 0 1 3 5 2 0 1 0 0 0 23 0 2408.0703 P46821 P46821 1811 1833 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 1.082E-18 96.455 By MS/MS By MS/MS 1 1 8571200 5494900 3076200 2411 968 2568 5380;5381 4383;4384 4384 2417 2 TAVAPSAVNLADPRTPTAPAVNLAGAR AMNLASPRTAVAPSAV AVNLAGARTPAALAAL R T A A R T 8 2 2 1 0 0 0 1 0 0 2 0 0 0 4 1 3 0 0 3 0 0 27 1 2600.4034 Q9UQ35 Q9UQ35 2275 2301 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.016297 42.322 By MS/MS By MS/MS 1 1 3769800 2530000 1239800 2412 1487 2569 5382;5383 4385;4386 4385 2 TAVIPINGSPR MLLKEPYKTAVIPING IPINGSPRTPRRGQNR K T A P R T 1 1 1 0 0 0 0 1 0 2 0 0 0 0 2 1 1 0 0 1 0 0 11 0 1123.635 P06400 P06400 241 251 RB1 Retinoblastoma-associated protein yes yes 2 0.0067398 82.515 By MS/MS By MS/MS 2 2 6084500 3041000 3043600 2413 858 2570;2571 5384;5385;5386;5387 4387;4388 4388 986 2 TAVVVGTITDDVR KLPGRENKTAVVVGTI GTITDDVRVQEVPKLK K T A V R V 1 1 0 2 0 0 0 1 0 1 0 0 0 0 0 0 3 0 0 4 0 0 13 0 1344.7249 F8VUA6;F8VYV2;A0A075B7A0;G3V203;H0YHA7;J3QQ67;Q07020 F8VUA6 27 39 RPL18 60S ribosomal protein L18 yes no 2 0.0067603 65.5 By MS/MS By matching 1 1 625990 420270 205730 2414 11 2572 5388;5389 4389 4389 1 TDALTSSPGR SPGRSSRRTDALTSSP ALTSSPGRDLPPFEDE R T D G R D 1 1 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1003.4934 P49736;C9J013;C9JZ21;F8WDM3 P49736 35 44 MCM2 DNA replication licensing factor MCM2 yes no 2 0.010426 75.819 By MS/MS By MS/MS 1 1 572860 0 572860 2415 978 2573 5390;5391 4390;4391 4391 2131 2 TDCPIHVYFVLDTSESVTMQSPTDILLFHMK RNNNCPEKTDCPIHVY DILLFHMKQFVPQFIS K T D M K Q 0 0 0 3 1 1 1 0 2 2 3 1 2 2 2 3 4 0 1 3 0 0 31 0 3623.735 P12110;C9JH44 P12110 41 71 COL6A2 Collagen alpha-2(VI) chain yes no 4 2.2957E-16 84.365 By MS/MS By MS/MS 1 1 31545000 24999000 6546800 2416 893 2574 5392;5393 4392;4393;4394 4394 153;154 3 TDGFAEAIHSPQVAGVPR PTLVVPHRTDGFAEAI PQVAGVPRFRFGPPED R T D P R F 3 1 0 1 0 1 1 2 1 1 0 0 0 1 2 1 1 0 0 2 0 0 18 0 1850.9275 P12270 P12270 2146 2163 TPR Nucleoprotein TPR yes yes 3 1.3568E-07 89.011 By MS/MS By MS/MS 1 1 8899100 5257300 3641800 2417 894 2575 5394;5395 4395;4396 4396 1019 2 TDGSISGDRQPVTVADYISR RRRNRGNRTDGSISGD TVADYISRAESQSRQR R T D S R A 1 2 0 3 0 1 0 2 0 2 0 0 0 0 1 3 2 0 1 2 0 0 20 1 2136.0447 P51116 P51116 598 617 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 0.0038536 53.266 By MS/MS By matching 1 1 5572000 2776300 2795700 2418 991 2576 5396;5397 4397 4397 1137 1 TDKSSASAPDVDDPEAFPALA GRPNRGSRTDKSSASA PEAFPALA________ R T D L A - 5 0 0 4 0 0 1 0 0 0 1 1 0 1 3 3 1 0 0 1 0 0 21 1 2102.9644 Q8NC51 Q8NC51 388 408 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 6.3408E-17 98.077 By MS/MS By MS/MS 1 1 34976000 19780000 15196000 2419 1264 2577 5398;5399 4398;4399 4399 1492;1493;2194 2 TDQTPRLPAPK TEKQQWGRTDQTPRLP TPRLPAPKEQGRAADA R T D P K E 1 1 0 1 0 1 0 0 0 0 1 1 0 0 3 0 2 0 0 0 0 0 11 1 1222.667 F5H1L9 F5H1L9 35 45 JPH4 yes yes 2 0.00040092 99.343 By MS/MS By matching 1 1 46983000 25844000 21139000 2420 494 2578 5400;5401 4400 4400 24 2006 1 TDSREDEISPPPPNPVVK NLQKAGTRTDSREDEI PPPNPVVKGRRRRGAI R T D V K G 0 1 1 2 0 0 2 0 0 1 0 1 0 0 5 2 1 0 0 2 0 0 18 1 1975.9851 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644 K7EMU2 75 92 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 3 1.194E-21 110.97 By MS/MS By MS/MS 1 1 12620000 6866100 5754100 2421 722 2579 5402;5403 4401;4402;4403;4404;4405 4402 844 5 TDSVIIADQTPTPTR TLKFGPARTDSVIIAD DQTPTPTRFLKNCEEV R T D T R F 1 1 0 2 0 1 0 0 0 2 0 0 0 0 2 1 4 0 0 1 0 0 15 0 1613.8261 K7ESA4;K7ELQ4;P17544 K7ESA4 42 56 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes no 2 0.0058501 72.175 By MS/MS By MS/MS 1 1 1431600 647530 784060 2422 731 2580 5404;5405 4406;4407;4408 4408 2068 3 TDYIPLLDVDEK VVGETVGKTDYIPLLD PLLDVDEKTGNSESKK K T D E K T 0 0 0 3 0 0 1 0 0 1 2 1 0 0 1 0 1 0 1 1 0 0 12 0 1419.7133 E7EVA0;P27816;H7C456;A0A0J9YVV8;A0A0J9YW37 E7EVA0 45 56 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.013231 60.398 By MS/MS By MS/MS 1 1 1591900 739080 852780 2423 427 2581 5406;5407 4409;4410 4409 2331 1 TDYNASVSVPDSSGPER GKNIKALRTDYNASVS PDSSGPERILSISADI R T D E R I 1 1 1 2 0 0 1 1 0 0 0 0 0 0 2 4 1 0 1 2 0 0 17 0 1779.7911 P61978;Q5T6W2 P61978 70 86 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0069331 55.196 By MS/MS By matching 1 1 2848200 2041300 806890 2424 1018 2582 5408;5409 4411 4411 1 TEDSIRDYEDGMEVDTTPTVAGQFEDADVDH QYNMAGVRTEDSIRDY FEDADVDH________ R T E D H - 2 1 0 7 0 1 4 2 1 1 0 0 1 1 1 1 4 0 1 3 0 0 31 1 3456.4423 P54105;E9PMI6;J3KN38 P54105 207 237 CLNS1A Methylosome subunit pICln yes no 3 0.0024827 43.31 By MS/MS By matching 1 1 9527600 4220600 5307100 2425 1008 2583 5410;5411 4412 4412 181 1157;2139 1 TEEARPSPAPGPGTPTGTPTR AAGADSPKTEEARPSP TPTGTPTRTPSRTAPG K T E T R T 2 2 0 0 0 0 2 3 0 0 0 0 0 0 6 1 5 0 0 0 0 0 21 1 2076.0236 Q4KMP7 Q4KMP7 135 155 TBC1D10B TBC1 domain family member 10B yes yes 3 0.0052928 51.688 By MS/MS By matching 1 1 8247900 5431000 2816900 2426 1146 2584 5412;5413 4413 4413 2166 1 TEEIFYYYDTNTGK ATRTMNTRTEEIFYYY YYDTNTGKEGKLDIVM R T E G K E 0 0 1 1 0 0 2 1 0 1 0 1 0 1 0 0 3 0 3 0 0 0 14 0 1742.7675 Q6UX06 Q6UX06 450 463 OLFM4 Olfactomedin-4 yes yes 2;3 3.3383E-12 111.5 By MS/MS By MS/MS 3 3 143020000 91970000 51049000 2427 1206 2585;2586 5414;5415;5416;5417;5418;5419 4414;4415;4416;4417;4418;4419;4420;4421 4418 8 TEESSAVQYFQMRK ERSVFSERTEESSAVQ VQYFQMRKLRLREVK_ R T E R K L 1 1 0 0 0 2 2 0 0 0 0 1 1 1 0 2 1 0 1 1 0 0 14 1 1702.7985 K7ERM3;K7EIQ8;K7EPK1 K7ERM3 72 85 CARM1 yes no 2 0.0085487 42.785 By matching By MS/MS 1 1 2056100 1217900 838190 2428 723 2587 5420;5421 4422 4422 845;2370 1 TEIMSPLYQDEAPK QTPPSCLKTEIMSPLY LYQDEAPKGTEASSGT K T E P K G 1 0 0 1 0 1 2 0 0 1 1 1 1 0 2 1 1 0 1 0 0 0 14 0 1620.7705 Q8IY81 Q8IY81 580 593 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.0023126 68.277 By MS/MS By MS/MS 2 2 3060800 1569800 1491000 2429 1246 2588;2589 5422;5423;5424;5425 4423;4424;4425;4426 4426 222 1472 4 TELFIAAEGIHTGQFVYCGK DPYRFKKRTELFIAAE GQFVYCGKKAQLNIGN R T E G K K 2 0 0 0 1 1 2 3 1 2 1 1 0 2 0 0 2 0 1 1 0 0 20 0 2240.0936 G3V1A1;E9PKZ0;E9PKU4;P62917 G3V1A1 73 92 RPL8 60S ribosomal protein L8 yes no 3 0.0008374 72.184 By MS/MS 1 918480 918480 0 2430 460 2590 5426 4427 4427 1 TESAYDWTSLSSSSIK NYQEALKRTESAYDWT SLSSSSIKSGSSSSSI R T E I K S 1 0 0 1 0 0 1 0 0 1 1 1 0 0 0 6 2 1 1 0 0 0 16 0 1760.8105 C9J164;C9K0J5;Q70E73 C9J164 520 535 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 2 0.008637 53.448 By matching By MS/MS 1 1 3800600 2340300 1460300 2431 314 2591 5427;5428 4428 4428 2308 1 TESPATAAETASEELDNR EPEPPSGRTESPATAA ASEELDNRSLEEILNS R T E N R S 4 1 1 1 0 0 4 0 0 0 1 0 0 0 1 2 3 0 0 0 0 0 18 0 1890.8443 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3 C9JWF0 39 56 SMC4 Structural maintenance of chromosomes protein 4 yes no 2;3 1.9546E-21 110.04 By MS/MS By MS/MS 2 2 16769000 10030000 6738900 2432 306 2592 5429;5430;5431;5432 4429;4430;4431;4432;4433 4430 367 4 TESSPSEASQHSMQSPQK PIVKNIAKTESSPSEA HSMQSPQKTTLILPTQ K T E Q K T 1 0 0 0 0 3 2 0 1 0 0 1 1 0 2 6 1 0 0 0 0 0 18 0 1944.8483 Q9UQR0 Q9UQR0 253 270 SCML2 Sex comb on midleg-like protein 2 yes yes 3 0.0062978 40.81 By MS/MS 1 536350 536350 0 2433 1490 2593 5433 4434 4434 258 1819 1 TETISFGSVSPGGVK HFESSTVKTETISFGS SVSPGGVKLEISTKEV K T E V K L 0 0 0 0 0 0 1 3 0 1 0 1 0 1 1 3 2 0 0 2 0 0 15 0 1464.746 A8K968;A0A0A0MRA8;A0A0A0MSA4;J3QS83;A0A0J9YY18;Q9Y2J2 A8K968 622 636 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 2 0.007554 51.546 By matching By MS/MS 1 1 1002700 488200 514520 2434 98 2594 5434;5435 4435 4435 122 1 TEYLNFEKSSSVSR ________________ EKSSSVSRYGASQVED M T E S R Y 0 1 1 0 0 0 2 0 0 0 1 1 0 1 0 4 1 0 1 1 0 0 14 1 1645.7948 E5RGE9 E5RGE9 2 15 ESRP1 yes yes 2 0.011292 50.806 By matching By MS/MS 1 1 802300 549140 253160 2435 384 2595 5436;5437 4436 4436 440;441 1 TFHIFYYLLSGAGEHLK IRQAKEERTFHIFYYL SGAGEHLKTDLLLEPY R T F L K T 1 0 0 0 0 0 1 2 2 1 3 1 0 2 0 1 1 0 2 0 0 0 17 0 1995.0254 P35579 P35579 273 289 MYH9 Myosin-9 yes yes 4 0.00033418 75.998 By MS/MS 1 672290 0 672290 2436 950 2596 5438 4437 4437 1 TFLDKDAQRLSPIPEEVPK EKLEKSKKTFLDKDAQ PIPEEVPKSTLESEKP K T F P K S 1 1 0 2 0 1 2 0 0 1 2 2 0 1 3 1 1 0 0 1 0 0 19 2 2182.1634 Q96T23;H0YER1;H0YCN2 Q96T23 594 612 RSF1 Remodeling and spacing factor 1 yes no 3 0.011042 51.235 By matching By MS/MS 1 1 5467200 2718300 2748900 2437 1352 2597 5439;5440 4438 4438 1607 1 TFQARPLSADLTK AKPEVRRRTFQARPLS PLSADLTKLFSSSASS R T F T K L 2 1 0 1 0 1 0 0 0 0 2 1 0 1 1 1 2 0 0 0 0 0 13 1 1446.7831 Q9BY89 Q9BY89 501 513 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.011062 57.414 By matching By MS/MS 1 1 2704700 1485700 1219000 2438 1380 2598 5441;5442 4439 4439 1646 1 TFQLNPITGDMQLVK HASEEIRKTFQLNPIT TGDMQLVKYLNFEAIN K T F V K Y 0 0 1 1 0 2 0 1 0 1 2 1 1 1 1 0 2 0 0 1 0 0 15 0 1703.8916 Q9Y5E6 Q9Y5E6 291 305 PCDHB3 Protocadherin beta-3 yes yes 2 0.0015846 62.633 By matching By MS/MS 1 1 3540600 1766500 1774200 2439 1511 2599 5443;5444 4440 4440 2245 0 TFSEPGDHPGMLTSGKR SNGRSYKRTFSEPGDH GMLTSGKRSHLESSSR R T F K R S 0 1 0 1 0 0 1 3 1 0 1 1 1 1 2 2 2 0 0 0 0 0 17 1 1815.8574 Q9HA47 Q9HA47 251 267 UCK1 Uridine-cytidine kinase 1 yes yes 3 0.010249 53.828 By MS/MS 1 616500 0 616500 2440 1407 2600 5445 4441 4441 1701 1 TFVNITPAEVGVLVGK VWAAVPGKTFVNITPA EVGVLVGKDRSSFYVN K T F G K D 1 0 1 0 0 0 1 2 0 1 1 1 0 1 1 0 2 0 0 4 0 0 16 0 1642.9294 P07737;I3L3D5 P07737 39 54 PFN1 Profilin-1 yes no 2 0.0028117 67.879 By MS/MS By MS/MS 1 1 3954900 1803600 2151300 2441 866 2601 5446;5447 4442;4443 4443 2 TGDLGIPPNPEDRSPSPEPIYNSEGK EDLTRKLRTGDLGIPP PIYNSEGKRLNTREFR R T G G K R 0 1 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 26 1 2765.3144 Q15637 Q15637 67 92 SF1 Splicing factor 1 yes yes 3 0.0038118 49.076 By MS/MS By MS/MS 2 2 20618000 13648000 6970200 2442 1127 2602 5448;5449;5450;5451 4444;4445;4446;4447 4444 1312;1313;1314 4 TGDLGIPPNPEDRSPSPEPIYNSEGKR EDLTRKLRTGDLGIPP IYNSEGKRLNTREFRT R T G K R L 0 2 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 27 2 2921.4155 Q15637 Q15637 67 93 SF1 Splicing factor 1 yes yes 3 0.00016972 54.728 By MS/MS By matching 2 2 5588900 3812500 1776400 2443 1127 2603 5452;5453;5454;5455 4448;4449 4449 1312;1313;1314 1 TGENKGWSGPK ________________ NKGWSGPKPGFPEPTN - T G P K P 0 0 1 0 0 0 1 3 0 0 0 2 0 0 1 1 1 1 0 0 0 0 11 1 1159.5622 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3;E5RJ67;E5RJN7;E7EVI1 H0YBY0 1 11 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 3 0.018302 42.336 By MS/MS 1 0 0 0 2444 129 2604 5456 4450 4450 1 TGLDSPTGIDFSDITANSFTVHWIAPR TPLRGRQKTGLDSPTG TVHWIAPRATITGYRI K T G P R A 2 1 1 3 0 0 0 2 1 3 1 0 0 2 2 3 4 1 0 1 0 0 27 0 2917.4246 P02751;H0Y7Z1 P02751 1356 1382 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 5.5489E-18 78.236 By MS/MS 1 0 0 0 2445 843 2605 5457 4451 4451 9 1 TGLTSGNVTENLQAYIDK SSTPFPFRTGLTSGNV NLQAYIDKSTQASSGE R T G D K S 1 0 2 1 0 1 1 2 0 1 2 1 0 0 0 1 3 0 1 1 0 0 18 0 1922.9585 Q499Y3 Q499Y3 96 113 Putative uncharacterized protein C10orf88-like yes yes 2 0.014691 47.039 By MS/MS 1 0 0 0 2446 1145 2606 5458 4452 4452 2463 1 TGSRDCSTQTER PLLSAHSKTGSRDCST DCSTQTERGTESNKTA K T G E R G 0 2 0 1 1 1 1 1 0 0 0 0 0 0 0 2 3 0 0 0 0 0 12 1 1396.6001 Q4VCS5;E7ERM3 Q4VCS5 857 868 AMOT Angiomotin yes no 3 0.013704 50.827 By MS/MS By matching 1 1 1649800 992490 657300 2447 1147 2607 5459;5460 4453 4453 1 TGSTSSKEDDYESDAATIVQK VGSAQQVRTGSTSSKE DAATIVQKCLEIYDMI R T G Q K C 2 0 0 3 0 1 2 1 0 1 0 2 0 0 0 4 3 0 1 1 0 0 21 1 2231.0077 Q5T4S7 Q5T4S7 360 380 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2;3 0.0013231 75.215 By MS/MS By MS/MS 2 2 16143000 9444200 6698500 2448 1169 2608 5461;5462;5463;5464 4454;4455 4454 1375;2177;2178 2 TGSVGIGNLQR GSQTALYRTGSVGIGN VGIGNLQRTSSQRSTL R T G Q R T 0 1 1 0 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1100.5938 Q99569 Q99569 445 455 PKP4 Plakophilin-4 yes yes 2 7.2658E-06 116.74 By MS/MS By MS/MS 1 1 2717500 1399500 1317900 2449 1356 2609 5465;5466 4456;4457 4457 1611 2 TGSYGALAEITASK TWRLGLRKTGSYGALA LAEITASKEGQKEKDT K T G S K E 3 0 0 0 0 0 1 2 0 1 1 1 0 0 0 2 2 0 1 0 0 0 14 0 1367.6933 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 443 456 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.00010276 85.288 By MS/MS By MS/MS 1 1 4595100 2482300 2112800 2450 765 2610 5467;5468 4458;4459 4458 891;2073;2382 2 TGVTSTSDSEEEGDDQEGEKKR SKRKNLAKTGVTSTSD DQEGEKKRKGGRNFQT K T G K R K 0 1 0 3 0 1 5 3 0 0 0 2 0 0 0 3 3 0 0 1 0 0 22 2 2383.0259 O75475 O75475 267 288 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 1.3869E-10 86.453 By MS/MS By MS/MS 2 1 33573000 24580000 8992200 2451 798 2611 5469;5470;5471 4460;4461;4462;4463;4464 4463 937;938;939;2082 5 THINIVVIGHVDSGK ________________ IGHVDSGKSTTTGHLI K T H G K S 0 0 1 1 0 0 0 2 2 3 0 1 0 0 0 1 1 0 0 3 0 0 15 0 1587.8733 Q5VTE0;P68104;A0A087WV01;Q05639;A0A087WVQ9;A6PW80;Q5JR01 Q5VTE0 6 20 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 yes no 3 2.6075E-05 89.136 By MS/MS 1 1249400 1249400 0 2452 1029 2612 5472 4465 4465 1 THSTSSSLGSGESPFSR MTRLARSRTHSTSSSL SGESPFSRSVTSNQSD R T H S R S 0 1 0 0 0 0 1 2 1 0 1 0 0 1 1 7 2 0 0 0 0 0 17 0 1722.7809 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 234 250 NDRG3 Protein NDRG3 yes no 2;3 0.001496 65.298 By MS/MS By MS/MS 2 2 9405000 5350700 4054400 2453 535 2613 5473;5474;5475;5476 4466;4467;4468 4466 627;628;2017;2018 3 TIAATPIQTLPQSQSTPK SQPATPTRTIAATPIQ PQSQSTPKRIDTPSLE R T I P K R 2 0 0 0 0 3 0 0 0 2 1 1 0 0 3 2 4 0 0 0 0 0 18 0 1881.0207 A0A0C4DG88;P14859 A0A0C4DG88 163 180 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 2 0.0022287 61.11 By MS/MS By matching 1 1 3027800 1614100 1413700 2454 150 2614 5477;5478 4469 4469 187;188 1 TIAHSPTSFTESSSK TVEHDENRTIAHSPTS SFTESSSKESQNTAEI R T I S K E 1 0 0 0 0 0 1 0 1 1 0 1 0 1 1 5 3 0 0 0 0 0 15 0 1578.7526 Q03164 Q03164 2094 2108 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 2 0.0018148 59.68 By matching By MS/MS 1 1 4849400 2824100 2025300 2455 1048 2615 5479;5480 4470 4470 1198 1 TIASDSEEEAGKELSDK DKSGKREKTIASDSEE AGKELSDKKNEEKDLF K T I D K K 2 0 0 2 0 0 4 1 0 1 1 2 0 0 0 3 1 0 0 0 0 0 17 1 1807.8323 Q96ST2 Q96ST2 435 451 IWS1 Protein IWS1 homolog yes yes 2 0.012621 50.376 By MS/MS By matching 1 1 5884400 3106200 2778200 2456 1350 2616 5481;5482 4471 4471 1 TIETSPSLSR PKKVLDGKTIETSPSL ETSPSLSRMPNQHACK K T I S R M 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 3 2 0 0 0 0 0 10 0 1089.5666 H3BP78;F8W7R3;Q9NVI1 H3BP78 230 239 FANCI Fanconi anemia group I protein yes no 2 3.5464E-05 101.35 By MS/MS 1 2828600 2828600 0 2457 529 2617 5483 4472 4472 618 1 TIEYLEEVAITFAK GLKPPEERTIEYLEEV EVAITFAKGLADKKIS R T I A K G 2 0 0 0 0 0 3 0 0 2 1 1 0 1 0 0 2 0 1 1 0 0 14 0 1625.8552 P40939 P40939 236 249 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.00053779 84.169 By MS/MS 1 1409400 0 1409400 2458 957 2618 5484 4473 4473 1 TIGGGDDSFNTFFSETGAGK DGQMPSDKTIGGGDDS FSETGAGKHVPRAVFV K T I G K H 1 0 1 2 0 0 1 5 0 1 0 1 0 3 0 2 3 0 0 0 0 0 20 0 2006.8858 Q71U36;P68363;F5H5D3;Q9BQE3;F8VRZ4;F8VS66;F8VQQ4;F8VVB9;Q6PEY2;Q13748;F8VRK0;F8VX09;F8VWV9;F8VXZ7;F8W0F6 Q71U36 41 60 TUBA1A;TUBA1B;TUBA1C;TUBA3E;TUBA3C Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2 0.0028571 59.607 By MS/MS By matching 1 1 2790200 1557400 1232800 2459 1030 2619 5485;5486 4474 4474 1172 1 TIQEVLEEQSEDEDR ARKQLPKRTIQEVLEE EQSEDEDREAKRKKEE R T I D R E 0 1 0 2 0 2 5 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 15 0 1818.8119 M0R0Q7;P18858 M0R0Q7 132 146 LIG1 DNA ligase;DNA ligase 1 yes no 2 0.0025377 56.793 By MS/MS By matching 1 1 2209900 1037500 1172400 2460 748 2620 5487;5488 4475 4475 866 1 TIQEVLEEQSEDEDREAK ARKQLPKRTIQEVLEE EDEDREAKRKKEEEEE R T I A K R 1 1 0 2 0 2 6 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 18 1 2146.9866 M0R0Q7;P18858 M0R0Q7 132 149 LIG1 DNA ligase;DNA ligase 1 yes no 2;3 1.2347E-26 118.48 By MS/MS By matching 2 2 34162000 18229000 15933000 2461 748 2621 5489;5490;5491;5492 4476;4477 4477 866 2 TISDGTISASK DYSQHIYRTISDGTIS DGTISASKQESGKMDA R T I S K Q 1 0 0 1 0 0 0 1 0 2 0 1 0 0 0 3 2 0 0 0 0 0 11 0 1078.5506 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 139 149 FNBP1L Formin-binding protein 1-like yes no 2 0.0020648 76.24 By MS/MS By MS/MS 1 1 2975600 1527200 1448400 2462 7 2622 5493;5494 4478;4479 4478 3 2 TISINSPK LLPSEITRTISINSPK TISINSPKAQTVQAVR R T I P K A 0 0 1 0 0 0 0 0 0 2 0 1 0 0 1 2 1 0 0 0 0 0 8 0 858.48108 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 862 869 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 0.010182 80.755 By MS/MS By matching 1 1 1839100 948220 890830 2463 188 2623 5495;5496 4480 4480 236 1 TISNPEVVMKR MPETSFTRTISNPEVV NPEVVMKRRRQQKLEK R T I K R R 0 1 1 0 0 0 1 0 0 1 0 1 1 0 1 1 1 0 0 2 0 0 11 1 1272.686 A8MQ02;J3KN01;P55196;Q5TIG5;F8W9I4;E9PFY5 A8MQ02 173 183 MLLT4 Afadin yes no 2 0.014336 64.121 By matching By MS/MS 1 1 1715300 689480 1025800 2464 242 2624 5497;5498 4481 4481 1 TISTSDPAEVLVK QEKAFSLKTISTSDPA DPAEVLVKNSQPIKTL K T I V K N 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 2 0 0 2 0 0 13 0 1358.7293 E5RJU9;Q86UE4 E5RJU9 436 448 MTDH Protein LYRIC yes no 2 0.0042793 63.181 By matching By MS/MS 1 1 856380 485710 370660 2465 396 2625 5499;5500 4482 4482 446 1 TITLEVEPSDTIENVK FVKTLTGKTITLEVEP SDTIENVKAKIQDKEG K T I V K A 0 0 1 1 0 0 3 0 0 2 1 1 0 0 1 1 3 0 0 2 0 0 16 0 1786.92 J3QSA3;F5GZ39;M0R1V7;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5PY61;Q96C32;P62987;P62979;P0CG47;P0CG48 J3QSA3 12 27 UBB;UBC;UBA52;RPS27A Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 2 7.4921E-06 93.623 By MS/MS By MS/MS 1 1 3744600 2417600 1326900 2466 271 2626 5501;5502 4483;4484 4484 2 TITVPVSGSPK KAVVPVSKTITVPVSG VPVSGSPKMSNIMQSI K T I P K M 0 0 0 0 0 0 0 1 0 1 0 1 0 0 2 2 2 0 0 2 0 0 11 0 1084.6128 E9PMC9;Q7Z589 E9PMC9 231 241 C11orf30;EMSY Protein EMSY yes no 2 0.0088541 60.49 By matching By MS/MS 1 1 1088700 596800 491950 2467 466 2627 5503;5504 4485 4485 549;550 1 TIVTTLQDSIR VLELRGLRTIVTTLQD TTLQDSIRKVTEENKE R T I I R K 0 1 0 1 0 1 0 0 0 2 1 0 0 0 0 1 3 0 0 1 0 0 11 0 1245.6929 P07996;CON__Q28194 P07996 289 299 THBS1 Thrombospondin-1 yes no 2 0.0028406 81.338 By MS/MS By MS/MS 1 1 1258400 1098800 159680 + 2468 870 2628 5505;5506 4486;4487;4488 4487 3 TIYVRDPTSNK QPVRNTERTIYVRDPT VRDPTSNKQQRPVPES R T I N K Q 0 1 1 1 0 0 0 0 0 1 0 1 0 0 1 1 2 0 1 1 0 0 11 1 1292.6725 P07948;E5RJ37 P07948 30 40 LYN Tyrosine-protein kinase Lyn yes no 3 0.016088 54.524 By matching By MS/MS 1 1 743900 325870 418030 2469 869 2629 5507;5508 4489 4489 1 TKDSGSISLQETR SISSFLSKTKDSGSIS SISLQETRRQKKTLKK K T K T R R 0 1 0 1 0 1 1 1 0 1 1 1 0 0 0 3 2 0 0 0 0 0 13 1 1420.7158 Q9H2G2 Q9H2G2 774 786 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0050147 69.331 By MS/MS 1 2375800 0 2375800 2470 1394 2630 5509 4490 4490 1680 1 TKEVYELLDSPGK GKKLYEGKTKEVYELL ELLDSPGKVLLQSKDQ K T K G K V 0 0 0 1 0 0 2 1 0 0 2 2 0 0 1 1 1 0 1 1 0 0 13 1 1477.7664 E9PBS1;P22234 E9PBS1 18 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 0.00077925 88.507 By MS/MS 1 631150 0 631150 2471 433 2631 5510 4491 4491 511;2332 1 TKEYVSNDAAQSDDEEKLQSQPTDTDGGR LTLHIMRRTKEYVSND PTDTDGGRLKQKTTQL R T K G R L 2 1 1 5 0 3 3 2 0 0 1 2 0 0 1 3 3 0 1 1 0 0 29 2 3183.4076 Q5JSH3;H7BY83 Q5JSH3 392 420 WDR44 WD repeat-containing protein 44 yes no 3 0.012396 44.264 By MS/MS 1 5548900 0 5548900 2472 1156 2632 5511 4492 4492 1 TKFASDDEHDEHDENGATGPVK KVQFQGKKTKFASDDE NGATGPVKRAREETDK K T K V K R 2 0 1 4 0 0 3 2 2 0 0 2 0 1 1 1 2 0 0 1 0 0 22 1 2398.0309 P05455 P05455 362 383 SSB Lupus La protein yes yes 3;4 8.7709E-09 87.062 By MS/MS By MS/MS 2 2 4931600 1229900 3701700 2473 856 2633;2634 5512;5513;5514;5515 4493;4494;4495;4496 4495 10 985;2097 4 TKFASDDEHDEHDENGATGPVKR KVQFQGKKTKFASDDE GATGPVKRAREETDKE K T K K R A 2 1 1 4 0 0 3 2 2 0 0 2 0 1 1 1 2 0 0 1 0 0 23 2 2554.132 P05455 P05455 362 384 SSB Lupus La protein yes yes 3;4 3.4677E-38 116.27 By MS/MS By MS/MS 6 6 205920000 110990000 94927000 2474 856 2635;2636 5516;5517;5518;5519;5520;5521;5522;5523;5524;5525;5526;5527 4497;4498;4499;4500;4501;4502;4503;4504 4499 10 985;2097 8 TKPSVDSTR WEESSQGRTKPSVDST KPSVDSTREEKERWIR R T K T R E 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 2 2 0 0 1 0 0 9 1 989.51417 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C0A7 A0A087X1U1 590 598 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.017666 54.157 By MS/MS 1 0 0 0 2475 76 2637 5528 4505 4505 1 TKPTQAAGPSSPQKPPTPEETK PQKQPQTKTKPTQAAG PPTPEETKAASPVLQE K T K T K A 2 0 0 0 0 2 2 1 0 0 0 3 0 0 6 2 4 0 0 0 0 0 22 2 2276.1648 F5H8D7;P18887 F5H8D7 406 427 XRCC1 DNA repair protein XRCC1 yes no 3 0.00056678 75.319 By MS/MS By MS/MS 2 3 12885000 7619700 5265300 2476 506 2638;2639 5529;5530;5531;5532;5533 4506;4507;4508 4508 599;2013 3 TLDFDPLLSPASPK ACGATLKRTLDFDPLL LLSPASPKRRRCAPLS R T L P K R 1 0 0 2 0 0 0 0 0 0 3 1 0 1 3 2 1 0 0 0 0 0 14 0 1499.7872 Q53H80 Q53H80 10 23 AKIRIN2 Akirin-2 yes yes 2 5.2364E-08 106.42 By MS/MS By MS/MS 1 1 4475700 2397400 2078300 2477 1151 2640 5534;5535 4509;4510 4510 1342;1343 2 TLDFDPLLSPASPKR ACGATLKRTLDFDPLL LSPASPKRRRCAPLSA R T L K R R 1 1 0 2 0 0 0 0 0 0 3 1 0 1 3 2 1 0 0 0 0 0 15 1 1655.8883 Q53H80 Q53H80 10 24 AKIRIN2 Akirin-2 yes yes 2 0.0028131 64.476 By MS/MS By matching 1 1 598630 310670 287960 2478 1151 2641 5536;5537 4511 4511 1342;1343 1 TLDSGTSEIVKSPR SSLEEKQRTLDSGTSE SEIVKSPRIECSKTRR R T L P R I 0 1 0 1 0 0 1 1 0 1 1 1 0 0 1 3 2 0 0 1 0 0 14 1 1488.7784 Q9H501 Q9H501 187 200 ESF1 ESF1 homolog yes yes 3 0.019771 43.752 By MS/MS By matching 1 1 5455700 2831900 2623800 2479 1399 2642 5538;5539 4512 4512 1 TLFLGVTNLQAK DALTGMVKTLFLGVTN GVTNLQAKHVEMTSLC K T L A K H 1 0 1 0 0 1 0 1 0 0 3 1 0 1 0 0 2 0 0 1 0 0 12 0 1303.75 Q05707;J3QT83 Q05707 917 928 COL14A1 Collagen alpha-1(XIV) chain yes no 2 0.0032734 78.655 By MS/MS By matching 1 1 1245800 977420 268330 2480 1053 2643 5540;5541 4513 4513 1 TLHCEGTEINSDDEQESK PFKTKKIKTLHCEGTE SDDEQESKEVEETATA K T L S K E 0 0 1 2 1 1 4 1 1 1 1 1 0 0 0 2 2 0 0 0 0 0 18 0 2090.8699 H0Y9Z8;Q9BPX3 H0Y9Z8 229 246 NCAPG Condensin complex subunit 3 yes no 2;3 0.0011798 66.448 By MS/MS By MS/MS 2 2 27508000 14309000 13199000 2481 605 2644 5542;5543;5544;5545 4514;4515;4516 4514 723;724 3 TLLSESSSQSSKSPSLSSK LDSLGRKKTLLSESSS KSPSLSSKQQHQPSAS K T L S K Q 0 0 0 0 0 1 1 0 0 0 3 2 0 0 1 10 1 0 0 0 0 0 19 1 1938.9746 Q9UPU5 Q9UPU5 1129 1147 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 3 0.00407 53.255 By matching By MS/MS 1 1 3277400 2076800 1200700 2482 1483 2645 5546;5547 4517 4517 1794;1795 1 TLNAETPKSSPLPAK LLDEEVSRTLNAETPK KSSPLPAKGRDPVEIL R T L A K G 2 0 1 0 0 0 1 0 0 0 2 2 0 0 3 2 2 0 0 0 0 0 15 1 1552.8461 Q7L2J0 Q7L2J0 208 222 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2;3 3.901E-15 130.47 By MS/MS By MS/MS 2 2 10806000 5656100 5150100 2483 1215 2646 5548;5549;5550;5551 4518;4519;4520;4521 4518 1425;1426 4 TLNMTTSPEEK TPRKRISKTLNMTTSP MTTSPEEKRKIIGDTF K T L E K R 0 0 1 0 0 0 2 0 0 0 1 1 1 0 1 1 3 0 0 0 0 0 11 0 1249.586 P49915 P49915 326 336 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 6.6396E-06 117.03 By MS/MS By MS/MS 1 1 7543600 3803600 3740000 2484 984 2647 5552;5553 4522;4523 4522 1131;2134 2 TLNMTTSPEEKR TPRKRISKTLNMTTSP TTSPEEKRKIIGDTFV K T L K R K 0 1 1 0 0 0 2 0 0 0 1 1 1 0 1 1 3 0 0 0 0 0 12 1 1405.6871 P49915 P49915 326 337 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 0.0018664 84.173 By MS/MS By matching 1 1 1966600 1110600 856000 2485 984 2648 5554;5555 4524 4524 1131;2134 1 TLNNDIMLIK RHPQYDRKTLNNDIML NNDIMLIKLSSRAVIN K T L I K L 0 0 2 1 0 0 0 0 0 2 2 1 1 0 0 0 1 0 0 0 0 0 10 0 1173.6427 A6XGL3;CON__P07477;E7EQ64;P07477;H0Y8D1;A0A087WW55 A6XGL3 93 102 PRSS1 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2 yes no 2 0.00012296 111.95 By MS/MS By MS/MS 1 1 8107800 5841900 2265900 + 2486 240 2649 5556;5557 4525;4526 4526 41 2 TLNQPDSQLQLTTGNGLFLSEGLK EGFQELLRTLNQPDSQ LFLSEGLKLVDKFLED R T L L K L 0 0 2 1 0 3 1 3 0 0 6 1 0 1 1 2 3 0 0 0 0 0 24 0 2573.3337 P01009;A0A0G2JRN3;A0A024R6I7;G3V2B9;G3V544 P01009 126 149 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 1.2936E-07 79.346 By MS/MS By matching 1 1 5195100 3143200 2051900 2487 836 2650 5558;5559 4527 4527 5 1 TLQKINESR LKEIETQKTLQKINES LQKINESRSWFFERIN K T L S R S 0 1 1 0 0 1 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 9 1 1087.5986 O00370 O00370 355 363 LINE-1 retrotransposable element ORF2 protein;Reverse transcriptase;Endonuclease yes yes 2 0.0032064 80.916 By matching By MS/MS 1 1 3979900 1336900 2642900 2488 755 2651 5560;5561 4528 4528 32 876 1 TLSADASVNTLPVVVSR IIGPSKERTLSADASV TLPVVVSREPSVPASC R T L S R E 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 3 2 0 0 4 0 0 17 0 1727.9418 H0Y641;H0Y4V9;Q92615 H0Y641 42 58 LARP4B La-related protein 4B yes no 2 0.0022581 59.634 By MS/MS By MS/MS 1 1 1778700 923010 855660 2489 587 2652 5562;5563 4529;4530 4530 703 2 TLSASTQDLSPH WHLDKAPRTLSASTQD STQDLSPH________ R T L P H - 1 0 0 1 0 1 0 0 1 0 2 0 0 0 1 3 2 0 0 0 0 0 12 0 1255.6044 Q6P597 Q6P597 493 504 KLC3 Kinesin light chain 3 yes yes 2 0.010891 54.65 By matching By MS/MS 1 1 756220 351920 404300 2490 1195 2653 5564;5565 4531 4531 1403 1 TLSDESICSNR SPRRSLYRTLSDESIC DESICSNRRGSSFGSS R T L N R R 0 1 1 1 1 0 1 0 0 1 1 0 0 0 0 3 1 0 0 0 0 0 11 0 1280.5667 Q9P2F8 Q9P2F8 1486 1496 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 2 0.016661 53.124 By matching By MS/MS 1 1 1510000 862150 647850 2491 1449 2654 5566;5567 4532 4532 1 TLSDESIYNSQR TSRRALHRTLSDESIY ESIYNSQREHFFTSRA R T L Q R E 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 3 1 0 1 0 0 0 12 0 1411.6579 O43166;F5GYF8 O43166 1583 1594 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 0.0047474 68.034 By MS/MS By MS/MS 1 1 2771700 1620700 1151000 2492 777 2655 5568;5569 4533;4534 4534 903 2 TLSEVDYAPAGPAR CSVLQMAKTLSEVDYA YAPAGPARSALLPGPL K T L A R S 3 1 0 1 0 0 1 1 0 0 1 0 0 0 2 1 1 0 1 1 0 0 14 0 1445.7151 A0A0A0MTP6;O15357;H0YFZ4 A0A0A0MTP6 1063 1076 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 0.004261 65.5 By matching By MS/MS 1 1 12360000 6163500 6196200 2493 131 2656 5570;5571 4535 4535 2271 1 TLSMDKGF ELEHVTRRTLSMDKGF TLSMDKGF________ R T L G F - 0 0 0 1 0 0 0 1 0 0 1 1 1 1 0 1 1 0 0 0 0 0 8 1 897.4266 P17858 P17858 773 780 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 1 0.0067944 61.78 By matching By MS/MS 1 1 1971300 1060800 910480 2494 908 2657 5572;5573 4536 4536 1027 1 TLSMIEEEIR KLRSRKQRTLSMIEEE SMIEEEIRAAQEREEE R T L I R A 0 1 0 0 0 0 3 0 0 2 1 0 1 0 0 1 1 0 0 0 0 0 10 0 1219.6118 Q9Y2D5;C9JVY5 Q9Y2D5 718 727 AKAP2 A-kinase anchor protein 2 yes no 2 0.0089655 64.121 By MS/MS By matching 1 1 1595300 914770 680510 2495 1495 2658 5574;5575 4537 4537 259 1829 1 TLSPTPSAEGYQDVR QSLGESPRTLSPTPSA AEGYQDVRDRMIHRST R T L V R D 1 1 0 1 0 1 1 1 0 0 1 0 0 0 2 2 2 0 1 1 0 0 15 0 1619.7791 J3QSX6;F8W8M4;A0A0A0MRL6;O14639;H0Y7N6;F6XFR5 J3QSX6 87 101 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.0014631 65.241 By MS/MS 1 4977200 4977200 0 2496 104 2659 5576 4538 4538 129 1 TLSSSAQEDIIR LRNQGVVRTLSSSAQE SAQEDIIRWFKEEQLP R T L I R W 1 1 0 1 0 1 1 0 0 2 1 0 0 0 0 3 1 0 0 0 0 0 12 0 1318.6729 Q9H788 Q9H788 313 324 SH2D4A SH2 domain-containing protein 4A yes yes 2 0.0018484 78.486 By MS/MS By MS/MS 1 1 7045700 4025300 3020400 2497 1403 2660 5577;5578 4539;4540 4539 1693 2 TLSSSSMDLSR GTGLSDSRTLSSSSMD SSSMDLSRRSSLVG__ R T L S R R 0 1 0 1 0 0 0 0 0 0 2 0 1 0 0 5 1 0 0 0 0 0 11 0 1182.5551 Q9H0B6 Q9H0B6 606 616 KLC2 Kinesin light chain 2 yes yes 2 0.00056223 93.766 By MS/MS By MS/MS 1 1 5388600 2779500 2609200 2498 1389 2661 5579;5580 4541;4542 4541 1667 2 TLTDEVNSPDSDRR RRKKISAKTLTDEVNS NSPDSDRRDKKGGNYK K T L R R D 0 2 1 3 0 0 1 0 0 0 1 0 0 0 1 2 2 0 0 1 0 0 14 1 1603.7438 F8VXC8;Q8TAQ2 F8VXC8 276 289 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 0.00015971 97.2 By MS/MS By MS/MS 1 1 11510000 5806200 5703900 2499 523 2662 5581;5582 4543;4544 4543 615 2 TLTNYKAFSQFVRPLIAAK VFSEEDYRTLTNYKAF VRPLIAAKNPKIAVSK R T L A K N 3 1 1 0 0 1 0 0 0 1 2 2 0 2 1 1 2 0 1 1 0 0 19 2 2167.2154 F5GWX5;A0A0C4DGG9;Q14839;F5H6N4 F5GWX5 167 185 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0080319 44.616 By matching By MS/MS 1 1 3367700 2264000 1103700 2500 156 2663 5583;5584 4545 4545 1 TLTYFNYDQSGDFQTVTFEGPEIR VILDNGGKTLTYFNYD TFEGPEIRKIFYGSFH K T L I R K 0 1 1 2 0 2 2 2 0 1 1 0 0 3 1 1 4 0 2 1 0 0 24 0 2827.2977 Q05707;A0A0A0MQT7 Q05707 1327 1350 COL14A1 Collagen alpha-1(XIV) chain yes no 2;3 0.00030107 65.753 By MS/MS By MS/MS 2 2 40183000 19852000 20330000 2501 1053 2664 5585;5586;5587;5588 4546;4547 4546 2 TLVLSNLSYSATEETLQEVFEK STWSGESKTLVLSNLS TLQEVFEKATFIKVPQ K T L E K A 1 0 1 0 0 1 4 0 0 0 4 1 0 1 0 3 3 0 1 2 0 0 22 0 2500.2585 P19338;H7BY16 P19338 487 508 NCL Nucleolin yes no 2;3 1.8782E-39 107.39 By MS/MS By MS/MS 2 2 23642000 12664000 10978000 2502 914 2665 5589;5590;5591;5592 4548;4549;4550;4551 4548 4 TMFAQVESDDEEAKNEPEWK AYSKTQPKTMFAQVES AKNEPEWKKRKI____ K T M W K K 2 0 1 2 0 1 5 0 0 0 0 2 1 1 1 1 1 1 0 1 0 0 20 1 2382.0322 Q9NW82 Q9NW82 631 650 WDR70 WD repeat-containing protein 70 yes yes 2 0.015589 43.594 By MS/MS 1 1064900 1064900 0 2503 1431 2666 5593 4552 4552 246 0 TMSVSDFNYSR SINEIPERTMSVSDFN VSDFNYSRTSPSKRPN R T M S R T 0 1 1 1 0 0 0 0 0 0 0 0 1 1 0 3 1 0 1 1 0 0 11 0 1305.566 Q96RT1;H0YA04 Q96RT1 1156 1166 ERBB2IP Protein LAP2 yes no 2 0.00069847 96.331 By MS/MS By MS/MS 2 2 2192800 1066500 1126400 2504 1348 2667;2668 5594;5595;5596;5597 4553;4554;4555 4555 233 1597;1598 3 TNEKVELQELNDR NTEFKNTRTNEKVELQ ELQELNDRFANYIDKV R T N D R F 0 1 2 1 0 1 3 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 13 1 1586.79 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;P17661 P08670 101 113 VIM;DES Vimentin;Desmin yes no 3 0.00018789 82.515 By matching By MS/MS 1 1 3172400 1945700 1226700 2505 874 2669 5598;5599 4556 4556 1 TNKSPEAKPLPGK LGSVEAPKTNKSPEAK EAKPLPGKLPKGISAG K T N G K L 1 0 1 0 0 0 1 1 0 0 1 3 0 0 3 1 1 0 0 0 0 0 13 2 1365.7616 P46087;F5H359;F5GWB7;F5H709;F5H5X6 P46087 64 76 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 3 0.0031208 78.166 By MS/MS By MS/MS 1 1 2000300 1345500 654840 2506 965 2670 5600;5601 4557;4558 4557 1094 2 TNLSGRQSPSFK EEKEVLLKTNLSGRQS GRQSPSFKLSLSSGTK K T N F K L 0 1 1 0 0 1 0 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 12 1 1320.6786 Q6IN85 Q6IN85 734 745 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 2 0.0012942 86.262 By MS/MS By MS/MS 1 1 4096100 2305000 1791100 2507 1187 2671 5602;5603 4559;4560 4559 1395 2 TNNHIGGGAFSVDSPR SSTGSLLKTNNHIGGG AFSVDSPRIYSNSLPP K T N P R I 1 1 2 1 0 0 0 3 1 1 0 0 0 1 1 2 1 0 0 1 0 0 16 0 1627.7703 Q9Y2U8 Q9Y2U8 389 404 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 0.0015239 70.802 By matching By MS/MS 1 1 832760 433560 399210 2508 1500 2672 5604;5605 4561 4561 1834 1 TNPPTQKPPSPPMSGR ARTGTLSRTNPPTQKP PSPPMSGRGTLGRNTP R T N G R G 0 1 1 0 0 1 0 1 0 0 0 1 1 0 6 2 2 0 0 0 0 0 16 1 1690.8461 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 174 189 ABI1 Abl interactor 1 yes no 3 0.005693 44.44 By MS/MS By matching 1 1 4724900 3158400 1566500 2509 111 2673 5606;5607 4562 4562 17 1919 1 TNSMGSATGPLPGTK SKGSKRVRTNSMGSAT TGPLPGTKVEPTVLDR R T N T K V 1 0 1 0 0 0 0 3 0 0 1 1 1 0 2 2 3 0 0 0 0 0 15 0 1417.6871 O15014 O15014 465 479 ZNF609 Zinc finger protein 609 yes yes 2 0.0042444 54.768 By matching By MS/MS 1 1 1714800 733060 981700 2510 766 2674 5608;5609 4563 4563 895 1 TNSMSSSGLGSPNR QGIGIPSRTNSMSSSG SGLGSPNRSSPSIICM R T N N R S 0 1 2 0 0 0 0 2 0 0 1 0 1 0 1 5 1 0 0 0 0 0 14 0 1393.6256 F8VQD8;A0A087X050;F8VVY1;F8VUB4;F8VX63;F8VP97;F8VV52;Q9NZN8 F8VQD8 70 83 CNOT2 CCR4-NOT transcription complex subunit 2 yes no 2 7.079E-05 97.767 By MS/MS By matching 2 2 6722700 3763000 2959700 2511 67 2675;2676 5610;5611;5612;5613 4564;4565;4566 4566 9 76 3 TNSPGFQK FDKPNFNRTNSPGFQK TNSPGFQKKVQFGNEN R T N Q K K 0 0 1 0 0 1 0 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 8 0 877.42938 A0A087X0H9;Q5T8P6 A0A087X0H9 521 528 RBM26 RNA-binding protein 26 yes no 2 0.0058809 99.788 By MS/MS By MS/MS 2 2 4051400 2040100 2011300 2512 70 2677 5614;5615;5616;5617 4567;4568;4569 4567 80 3 TNSSSSSPVVLK EKPRKRRRTNSSSSSP SSSPVVLKEVPKAVVP R T N L K E 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 5 1 0 0 2 0 0 12 0 1204.6299 E9PMC9;Q7Z589 E9PMC9 208 219 C11orf30;EMSY Protein EMSY yes no 2 0.014782 52.101 By matching By MS/MS 1 1 2108100 1104600 1003500 2513 466 2678 5618;5619 4570 4570 1 TNTMNGSKSPVISR PTRKPWERTNTMNGSK SKSPVISRPKSTPLSQ R T N S R P 0 1 2 0 0 0 0 1 0 1 0 1 1 0 1 3 2 0 0 1 0 0 14 1 1490.7511 A0A0U1RRM6;Q8N8S7 A0A0U1RRM6 732 745 ENAH Protein enabled homolog yes no 2 0.0054806 56.872 By MS/MS 1 666680 0 666680 2514 203 2679 5620 4571 4571 253;254 1 TNTMNGSKSPVISRPK PTRKPWERTNTMNGSK SPVISRPKSTPLSQPS R T N P K S 0 1 2 0 0 0 0 1 0 1 0 2 1 0 2 3 2 0 0 1 0 0 16 2 1715.8989 A0A0U1RRM6 A0A0U1RRM6 732 747 yes yes 3 0.00098135 55.782 By MS/MS By MS/MS 5 4 27586000 15644000 11942000 2515 203 2680;2681;2682;2683 5621;5622;5623;5624;5625;5626;5627;5628;5629 4572;4573;4574;4575;4576;4577;4578 4576 34 253;254 7 TNTPVKEDWNVR TTEVTQPRTNTPVKED VKEDWNVRITKLRKQV R T N V R I 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 0 2 1 0 2 0 0 12 1 1457.7263 P78347 P78347 556 567 GTF2I General transcription factor II-I yes yes 3 0.0035425 71.529 By MS/MS By MS/MS 1 1 3056100 1990600 1065500 2516 1032 2684 5630;5631 4579;4580 4580 2140 2 TPAAAAAMNLASPR AVNLADSRTPAAAAAM AMNLASPRTAVAPSAV R T P P R T 6 1 1 0 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 0 0 14 0 1340.6871 Q9UQ35 Q9UQ35 2261 2274 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 1.108E-34 150.51 By MS/MS By MS/MS 3 3 16499000 9106300 7392300 2517 1487 2685;2686 5632;5633;5634;5635;5636;5637 4581;4582;4583;4584;4585;4586;4587;4588;4589;4590;4591 4582 257 1815 11 TPDTSTYCYETAEK ETSTKTTRTPDTSTYC YCYETAEKITRTPQAS R T P E K I 1 0 0 1 1 0 2 0 0 0 0 1 0 0 1 1 4 0 2 0 0 0 14 0 1664.6876 P46821 P46821 2034 2047 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0041059 66.663 By matching By MS/MS 1 1 5407200 3093800 2313400 2518 968 2687 5638;5639 4592 4592 1100;2418 1 TPDTSTYCYETAEKITR ETSTKTTRTPDTSTYC ETAEKITRTPQASTYS R T P T R T 1 1 0 1 1 0 2 0 0 1 0 1 0 0 1 1 5 0 2 0 0 0 17 1 2034.9204 P46821 P46821 2034 2050 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.001602 60.918 By MS/MS By matching 1 1 1828100 1015200 812890 2519 968 2688 5640;5641 4593 4593 1100;2418 1 TPEDGDYSYEIIEK ETIGKTTKTPEDGDYS YSYEIIEKTTRTPEEG K T P E K T 0 0 0 2 0 0 3 1 0 2 0 1 0 0 1 1 1 0 2 0 0 0 14 0 1657.7359 P46821 P46821 1932 1945 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.00025715 88.681 By MS/MS By MS/MS 2 2 14833000 7814300 7018500 2520 968 2689;2690 5642;5643;5644;5645 4594;4595;4596 4595 1101;2419;2420 3 TPEEGGYSYDISEK EIIEKTTRTPEEGGYS YSYDISEKTTSPPEVS R T P E K T 0 0 0 1 0 0 3 2 0 1 0 1 0 0 1 2 1 0 2 0 0 0 14 0 1573.6784 P46821 P46821 1949 1962 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.3285E-13 126.19 By MS/MS By MS/MS 2 2 7681100 4303000 3378000 2521 968 2691 5646;5647;5648;5649 4597;4598;4599;4600 4597 1102;2421;2422 4 TPEELDDSDFETEDFDVR RKAVLMIRTPEELDDS ETEDFDVRSRTSVQTE R T P V R S 0 1 0 5 0 0 4 0 0 0 1 0 0 2 1 1 2 0 0 1 0 0 18 0 2157.8862 G3XAM7;P35221 G3XAM7 634 651 CTNNA1 Catenin alpha-1 yes no 2 4.9287E-27 114.52 By MS/MS 1 17507000 0 17507000 2522 570 2692 5650 4601 4601 670 1 TPESQPDTPPGTPLVSQDEKR TLRWEETRTPESQPDT LVSQDEKRDAELPKKR R T P K R D 0 1 0 2 0 2 2 1 0 0 1 1 0 0 5 2 3 0 0 1 0 0 21 1 2278.1077 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60 A0A0D9SEV0 111 131 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase yes no 3 0.0018412 51.611 By MS/MS By matching 1 1 3066800 1884300 1182500 2523 168 2693 5651;5652 4602 4602 1931 1 TPEVTCVVVDVSHEDPEVK KDTLMISRTPEVTCVV SHEDPEVKFNWYVDGV R T P V K F 0 0 0 2 1 0 3 0 1 0 0 1 0 0 2 1 2 0 0 6 0 0 19 0 2138.0201 A0A0A0MS08;P01857;A0A0A0MS07 A0A0A0MS08 139 157 IGHG1 Ig gamma-1 chain C region yes no 3 0.015286 50.653 By matching By MS/MS 1 1 2991400 1670600 1320800 2524 112 2694 5653;5654 4603 4603 0 TPLALAGSPTPK PSSPLLKKTPLALAGS LAGSPTPKNPEDKSPQ K T P P K N 2 0 0 0 0 0 0 1 0 0 2 1 0 0 3 1 2 0 0 0 0 0 12 0 1151.655 B9EGQ5;M0QXA7;O95785 B9EGQ5 170 181 WIZ Protein Wiz yes no 2 0.0059448 62.891 By MS/MS By matching 1 1 3094000 1618300 1475700 2525 305 2695 5655;5656 4604 4604 366 1 TPLSPSPMK PAAAAIPRTPLSPSPM PLSPSPMKTPPAAAVS R T P M K T 0 0 0 0 0 0 0 0 0 0 1 1 1 0 3 2 1 0 0 0 0 0 9 0 956.5001 F8WAN1;Q69YQ0 F8WAN1 865 873 SPECC1L-ADORA2A;SPECC1L Cytospin-A yes no 2 0.017859 56.434 By MS/MS By matching 1 1 1492800 881490 611310 2526 534 2696 5657;5658 4605 4605 88 1 TPLTATLSK TAAYPESKTPLTATLS PLTATLSKSGNTFRPE K T P S K S 1 0 0 0 0 0 0 0 0 0 2 1 0 0 1 1 3 0 0 0 0 0 9 0 930.5386 P01876 P01876 213 221 IGHA1 Ig alpha-1 chain C region yes yes 2 0.013948 69.812 By MS/MS 1 887820 887820 0 2527 841 2697 5659 4606 4606 1 TPPSTTVGSHSPPETPVLTR PKQDVVGKTPPSTTVG PETPVLTRSSAQTSAA K T P T R S 0 1 0 0 0 0 1 1 1 0 1 0 0 0 5 3 5 0 0 2 0 0 20 0 2060.0538 H7C4X9;A0A087WVZ6;Q9ULU4 H7C4X9 673 692 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.003487 50.215 By MS/MS 1 1619500 1619500 0 2528 38 2698 5660 4607 4607 46 1 TPQPSSPMDQMGK GGGQPLARTPQPSSPM SPMDQMGKMRPQPYGG R T P G K M 0 0 0 1 0 2 0 1 0 0 0 1 2 0 3 2 1 0 0 0 0 0 13 0 1402.6221 O14497 O14497 377 389 ARID1A AT-rich interactive domain-containing protein 1A yes yes 2 0.012465 51.092 By matching By MS/MS 1 2 4176400 1405300 2771100 2529 758 2699;2700 5661;5662;5663 4608;4609 4609 116 2 TPQSPAPCVLLR PETAPAARTPQSPAPC PAPCVLLRAQRSLAPE R T P L R A 1 1 0 0 1 1 0 0 0 0 2 0 0 0 3 1 1 0 0 1 0 0 12 0 1337.7126 Q9Y613 Q9Y613 495 506 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.0055183 64.827 By MS/MS By MS/MS 1 1 4998300 2717400 2281000 2530 1516 2701 5664;5665 4610;4611 4610 1861 2 TPRTPRTPQLK SPNYRNTRTPRTPRTP TPRTPQLKDSSQTSRF R T P L K D 0 2 0 0 0 1 0 0 0 0 1 1 0 0 3 0 3 0 0 0 0 0 11 2 1293.7517 A0A0B4J210;Q6PKG0;E5RH50;H0YC33 A0A0B4J210 782 792 LARP1 La-related protein 1 yes no 3 0.011722 62.162 By MS/MS 1 2851200 2851200 0 2531 139 2702 5666 4612 4612 1 TPSPKEEDEEPESPPEKK ASKASKEKTPSPKEED PESPPEKKTSTSPPPE K T P K K T 0 0 0 1 0 0 6 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 18 2 2051.9535 Q9H1E3 Q9H1E3 202 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 3.3215E-96 166.59 By MS/MS By MS/MS 1 1 94421000 68988000 25433000 2532 1393 2703 5667;5668 4613;4614;4615;4616;4617;4618 4618 1676 6 TPSSSPPITPPASETK SIRNWVTRTPSSSPPI TPPASETKIMSPRKAL R T P T K I 1 0 0 0 0 0 1 0 0 1 0 1 0 0 5 4 3 0 0 0 0 0 16 0 1595.8043 F5GZ90;Q9NZJ0 F5GZ90 466 481 DTL Denticleless protein homolog yes no 2 0.0058307 54.237 By MS/MS By MS/MS 1 1 3544700 1965900 1578800 2533 491 2704 5669;5670 4619;4620 4620 578;2004 2 TPSTPVACSTPAQLK PEQNEKLKTPSTPVAC CSTPAQLKRKIRKKSN K T P L K R 2 0 0 0 1 1 0 0 0 0 1 1 0 0 3 2 3 0 0 1 0 0 15 0 1556.7868 A0A0B4J211;Q6PL18 A0A0B4J211 467 481 ATAD2 ATPase family AAA domain-containing protein 2 yes no 2 0.0065463 52.527 By MS/MS By matching 1 1 1819500 1076900 742630 2534 140 2705 5671;5672 4621 4621 175 1 TPTSSPASSPLVAK KPLHGVLKTPTSSPAS ASSPLVAKKPLTTTPR K T P A K K 2 0 0 0 0 0 0 0 0 0 1 1 0 0 3 4 2 0 0 1 0 0 14 0 1341.714 Q14684 Q14684 728 741 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 3.4519E-57 160.87 By MS/MS By MS/MS 3 3 36731000 19747000 16984000 2535 1106 2706;2707 5673;5674;5675;5676;5677;5678 4622;4623;4624;4625;4626;4627 4623 1285;1286;1287;2158 6 TPVSGSLKSPVPR ENVKGGEKTPVSGSLK SLKSPVPRSDIPEPER K T P P R S 0 1 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 1 1323.751 H7C477;H0Y7U4;A0A0C4DG98;Q8NI27 H7C477 121 133 THOC2 THO complex subunit 2 yes no 2;3 0.00028154 95.197 By MS/MS By MS/MS 2 2 11017000 6229100 4787900 2536 151 2708 5679;5680;5681;5682 4628;4629;4630 4630 189;190 3 TPYEAYDPIGK APPSGLERTPYEAYDP EAYDPIGKYATATRFS R T P G K Y 1 0 0 1 0 0 1 1 0 1 0 1 0 0 2 0 1 0 2 0 0 0 11 0 1252.5976 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 533 543 KIRREL Kin of IRRE-like protein 1 yes no 2 0.0020853 83.869 By MS/MS By MS/MS 1 1 1719800 920510 799270 2537 265 2709 5683;5684 4631;4632 4632 2299 2 TQDPSSPGTTPPQAR VEGTPASRTQDPSSPG GTTPPQARQAPAPTVI R T Q A R Q 1 1 0 1 0 2 0 1 0 0 0 0 0 0 4 2 3 0 0 0 0 0 15 0 1538.7325 Q13112 Q13112 424 438 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 3.3675E-14 123.63 By MS/MS By MS/MS 3 2 25044000 16806000 8237900 2538 1077 2710;2711 5685;5686;5687;5688;5689 4633;4634;4635;4636;4637 4634 1237;1238;2148 5 TQFEDLVPSPTSEK NVDSEFARTQFEDLVP VPSPTSEKAFLAQIHA R T Q E K A 0 0 0 1 0 1 2 0 0 0 1 1 0 1 2 2 2 0 0 1 0 0 14 0 1576.7621 M0R0C4;M0QZ28;Q9Y4J8 M0R0C4 80 93 DTNA Dystrobrevin alpha yes no 2 0.0023509 67.994 By MS/MS By MS/MS 1 2 2528800 1415800 1113000 2539 745 2712 5690;5691;5692 4638;4639 4639 862 2 TQGAVEAAKVGALASLIR YSRTVQYRTQGAVEAA GALASLIRSVASFSIY R T Q I R S 5 1 0 0 0 1 1 2 0 1 2 1 0 0 0 1 1 0 0 2 0 0 18 1 1754.005 Q9Y646 Q9Y646 188 205 CPQ Carboxypeptidase Q yes yes 3 0.0015569 63.682 By MS/MS 1 0 0 0 2540 1517 2713 5693 4640 4640 43 1862;2246 1 TQLSPSIKR RSEAQRSKTQLSPSIK QLSPSIKRKREVSPPG K T Q K R K 0 1 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 9 1 1028.5978 Q8NFC6;H0Y9Y2 Q8NFC6 3016 3024 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 2 0.0097966 73.9 By matching By MS/MS 1 1 4646900 2794400 1852500 2541 1271 2714 5694;5695 4641 4641 1503 1 TQMAEVLPSPR GGKAKGKKTQMAEVLP AEVLPSPRGQRVIPRI K T Q P R G 1 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 1 0 0 1 0 0 11 0 1227.6282 P11388 P11388 1205 1215 TOP2A DNA topoisomerase 2-alpha yes yes 2 6.9121E-06 116.9 By MS/MS By MS/MS 2 2 7743000 4242500 3500400 2542 888 2715;2716 5696;5697;5698;5699 4642;4643;4644;4645;4646;4647 4647 152 1014 6 TQMSILEQRESLPIYKLK NKASYGKKTQMSILEQ SLPIYKLKEQLVQAVH K T Q L K E 0 1 0 0 0 2 2 0 0 2 3 2 1 0 1 2 1 0 1 0 0 0 18 2 2176.1926 F5H658;Q14562 F5H658 554 571 DHX8 ATP-dependent RNA helicase DHX8 yes no 3 0.010464 41.912 By matching By MS/MS 1 1 172850000 108460000 64387000 2543 502 2717 5700;5701 4648 4648 84 590;2010 1 TQNKEESYDFSK KPEPPKAKTQNKEESY EESYDFSKSYEYKSNP K T Q S K S 0 0 1 1 0 1 2 0 0 0 0 2 0 1 0 2 1 0 1 0 0 0 12 1 1474.6576 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1059 1070 TJP2 Tight junction protein ZO-2 yes no 2 0.019007 51.286 By MS/MS 1 855990 855990 0 2544 211 2718 5702 4649 4649 2286 1 TQPDGTSVPGEPASPISQR SITSKLPRTQPDGTSV PASPISQRLPPKVESL R T Q Q R L 1 1 0 1 0 2 1 2 0 1 0 0 0 0 4 3 2 0 0 1 0 0 19 0 1922.9334 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1728 1746 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 0.00124 67.136 By MS/MS By MS/MS 2 2 46872000 25715000 21157000 2545 55 2719 5703;5704;5705;5706 4650;4651;4652;4653 4653 62;63 4 TQSLSALPK PLPPGKRRTQSLSALP QSLSALPKERDSSSEK R T Q P K E 1 0 0 0 0 1 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 9 0 943.53385 A0A0A0MQR4;I3L2J0;Q96RK0 A0A0A0MQR4 171 179 CIC Protein capicua homolog yes no 2 0.0047615 75.566 By MS/MS By matching 1 1 2015200 1067800 947420 2546 90 2720 5707;5708 4654 4654 110 1 TQSPGGCSAEAVLAR GWNSRSPRTQSPGGCS SAEAVLARKKHRRRPS R T Q A R K 3 1 0 0 1 1 1 2 0 0 1 0 0 0 1 2 1 0 0 1 0 0 15 0 1502.7147 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2 K7ESM2 74 88 HEXIM2 Protein HEXIM2 yes no 2 0.0015257 69.331 By MS/MS By matching 1 1 2116200 1313000 803180 2547 724 2721 5709;5710 4655 4655 846 1 TQVLSPDSLFTAK QRNASYLKTQVLSPDS PDSLFTAKFVAYNEEE K T Q A K F 1 0 0 1 0 1 0 0 0 0 2 1 0 1 1 2 2 0 0 1 0 0 13 0 1405.7453 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948 A8MQ02 1674 1686 MLLT4 Afadin yes no 2 0.017391 48.405 By MS/MS By matching 1 1 1758300 1043600 714770 2548 242 2722 5711;5712 4656 4656 1 TQYNQVPSEDFER SNMEGYSKTQYNQVPS VPSEDFERTPQSPTLP K T Q E R T 0 1 1 1 0 2 2 0 0 0 0 0 0 1 1 1 1 0 1 1 0 0 13 0 1611.7165 P78310 P78310 316 328 CXADR Coxsackievirus and adenovirus receptor yes yes 2 0.0088078 60.255 By matching By MS/MS 1 1 2533100 1240900 1292200 2549 1031 2723 5713;5714 4657 4657 2438 1 TRLSTASEETVQNR PPICLRRRTRLSTASE SEETVQNRVSLEKVLG R T R N R V 1 2 1 0 0 1 2 0 0 0 1 0 0 0 0 2 3 0 0 1 0 0 14 1 1590.7962 H7C3R4;O43379 H7C3R4 40 53 WDR62 WD repeat-containing protein 62 yes no 3 3.5974E-05 100.27 By MS/MS By MS/MS 1 1 3031500 2252600 778910 2550 681 2724 5715;5716 4658;4659 4659 803;2055 2 TRSNPEGAEDR HSAEPRPRTRSNPEGA NPEGAEDRAVGAQASP R T R D R A 1 2 1 1 0 0 2 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 11 1 1230.5589 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;M0R2I2;J3KQS6;Q9NWV8 M0R3H9 27 37 BABAM1 BRISC and BRCA1-A complex member 1 yes no 2 0.0036733 74.537 By MS/MS By matching 1 1 9325300 4608700 4716600 2551 707 2725 5717;5718 4660 4660 833 1 TSAAACAVTDLSDDSDFDEKAK PKPKSVSKTSAAACAV SDFDEKAKLKYYKEIE K T S A K L 5 0 0 5 1 0 1 0 0 0 1 2 0 1 0 3 2 0 0 1 0 0 22 1 2316.0064 Q9NQZ2 Q9NQZ2 354 375 UTP3 Something about silencing protein 10 yes yes 3 0.0045448 44.788 By MS/MS By matching 1 1 3319400 1940900 1378500 2552 1416 2726 5719;5720 4661 4661 1712;1713;2223 1 TSAVSSPLLDQQR SASKKDRKTSAVSSPL SPLLDQQRNSKTNQSK K T S Q R N 1 1 0 1 0 2 0 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 13 0 1400.726 Q5T200;A0A087WX14 Q5T200 237 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.00044814 93.348 By MS/MS By matching 1 1 6008600 3132900 2875700 2553 1167 2727 5721;5722 4662 4662 1365;1366 1 TSDVGGYYYEK ESYEKTTRTSDVGGYY VGGYYYEKIERTTKSP R T S E K I 0 0 0 1 0 0 1 2 0 0 0 1 0 0 0 1 1 0 3 1 0 0 11 0 1280.5561 P46821 P46821 1898 1908 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0079824 68.557 By MS/MS 1 1002900 0 1002900 2554 968 2728 5723 4663 4663 2423 1 TSFSVGSDDELGPIR LGRFASYRTSFSVGSD DDELGPIRKKEEDQAS R T S I R K 0 1 0 2 0 0 1 2 0 1 1 0 0 1 1 3 1 0 0 1 0 0 15 0 1578.7526 Q9NRY4 Q9NRY4 1173 1187 ARHGAP35 Rho GTPase-activating protein 35 yes yes 2 0.019617 43.813 By MS/MS By matching 2 1 13587000 9771900 3815100 2555 1422 2729 5724;5725;5726 4664 4664 1 TSLDIEEYSDTEVQK ________________ YSDTEVQKNQVLTLEE R T S Q K N 0 0 0 2 0 1 3 0 0 1 1 1 0 0 0 2 2 0 1 1 0 0 15 0 1755.8051 P51580 P51580 6 20 TPMT Thiopurine S-methyltransferase yes yes 2 5.6417E-05 85.45 By MS/MS By MS/MS 1 1 4548500 2234900 2313700 2556 993 2730 5727;5728 4665;4666 4665 1139;2137 2 TSLEASMEASPK AMVKASPKTSLEASME ASMEASPKAKARDAPK K T S P K A 2 0 0 0 0 0 2 0 0 0 1 1 1 0 1 3 1 0 0 0 0 0 12 0 1249.586 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 411 422 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.00072941 96.756 By MS/MS By MS/MS 1 1 1520500 753110 767440 2557 108 2731 5729;5730 4667;4668 4667 137 2 TSLMSAESPTPR EEEVCDERTSLMSAES SAESPTPRSCQEGRQG R T S P R S 1 1 0 0 0 0 1 0 0 0 1 0 1 0 2 3 2 0 0 0 0 0 12 0 1275.6129 E5RHT1;B1AP22;P49810 E5RHT1 18 29 PSEN2 Presenilin;Presenilin-2;Presenilin-2 NTF subunit;Presenilin-2 CTF subunit yes no 2 2.5602E-06 106.29 By MS/MS By MS/MS 1 1 2287800 1103200 1184600 2558 255 2732 5731;5732 4669;4670 4670 327 1 TSLPLSPVK DYFPSPSKTSLPLSPV SLPLSPVKTAPLFSND K T S V K T 0 0 0 0 0 0 0 0 0 0 2 1 0 0 2 2 1 0 0 1 0 0 9 0 940.55933 Q86XL3 Q86XL3 263 271 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.00097369 94.465 By MS/MS By MS/MS 1 1 2146800 1185100 961650 2559 1235 2733 5733;5734 4671;4672 4672 1454 2 TSMGGTQQQFVEGVR AHQDTQRRTSMGGTQQ QQFVEGVRMEEIVEGC R T S V R M 0 1 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 15 0 1623.7675 B4DGU4;P35222 B4DGU4 544 558 CTNNB1 Catenin beta-1 yes no 2 0.009227 58.83 By matching By MS/MS 1 1 2306500 1251900 1054600 2560 264 2734 5735;5736 4673 4673 333;1950 1 TSPLKDNPSPEPQLDDIKR TKPPVGPKTSPLKDNP PQLDDIKRELRAEVDI K T S K R E 0 1 1 3 0 1 1 0 0 1 2 2 0 0 4 2 1 0 0 0 0 0 19 2 2149.1015 Q96JC9 Q96JC9 157 175 EAF1 ELL-associated factor 1 yes yes 3 0.0010358 69.111 By MS/MS By matching 1 1 4266000 2813100 1452900 2561 1337 2735 5737;5738 4674 4674 1577;2206 1 TSQVGAASAPAKESPR LQAKASGKTSQVGAAS APAKESPRKGAAPAPP K T S P R K 4 1 0 0 0 1 1 1 0 0 0 1 0 0 2 3 1 0 0 1 0 0 16 1 1555.7954 J3KQ96;E7ETY2;Q13428 J3KQ96 368 383 TCOF1 Treacle protein yes no 2;3 2.8253E-06 94.188 By MS/MS By MS/MS 2 2 106300000 61498000 44799000 2562 422 2736 5739;5740;5741;5742 4675;4676;4677;4678 4676 480 4 TSQVGAASAPAKESPRK LQAKASGKTSQVGAAS PAKESPRKGAAPAPPG K T S R K G 4 1 0 0 0 1 1 1 0 0 0 2 0 0 2 3 1 0 0 1 0 0 17 2 1683.8904 J3KQ96;E7ETY2;Q13428 J3KQ96 368 384 TCOF1 Treacle protein yes no 3 1.7024E-06 94.532 By MS/MS By MS/MS 1 1 3891500 2479900 1411600 2563 422 2737 5743;5744 4679;4680 4679 480 1 TSSAELSTSAPDEPLLQK LTGVSTIRTSSAELST PDEPLLQKSPSESFIG R T S Q K S 2 0 0 1 0 1 2 0 0 0 3 1 0 0 2 4 2 0 0 0 0 0 18 0 1872.9317 Q15139 Q15139 217 234 PRKD1 Serine/threonine-protein kinase D1 yes yes 2 0.0021672 69.03 By MS/MS By matching 1 1 3695800 1898500 1797200 2564 1119 2738 5745;5746 4681 4681 1306 1 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK PGGSGRARTSSFAEPG PGGTGGGKASVGAMGG R T S G K A 2 0 0 0 0 0 1 18 0 0 0 1 0 1 3 4 2 0 0 0 0 0 32 0 2432.0589 P49840 P49840 19 50 GSK3A Glycogen synthase kinase-3 alpha yes yes 3 1.2921E-08 56.612 By MS/MS By MS/MS 1 1 7663400 4241500 3421900 2565 982 2739 5747;5748 4682;4683 4682 1130 2 TSSFTEQLDEGTPNR TPTRMRSRTSSFTEQL LDEGTPNRENASTHAS R T S N R E 0 1 1 1 0 1 2 1 0 0 1 0 0 1 1 2 3 0 0 0 0 0 15 0 1680.7591 E7EVX2;Q86W71;Q13439;C9J0Y3;C9JHJ5 E7EVX2 39 53 GOLGA4 Golgin subfamily A member 4 yes no 2 0.00026031 92.247 By MS/MS By MS/MS 1 1 5829600 3205300 2624300 2566 428 2740 5749;5750 4684;4685 4684 503;504;1988;1989 2 TSSGDPPSPLVK GIARTPMKTSSGDPPS DPPSPLVKQLSEVFET K T S V K Q 0 0 0 1 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 1 0 0 12 0 1183.6085 F5GX58;F8WDL1;Q99618 F5GX58 80 91 CDCA3 Cell division cycle-associated protein 3 yes no 2 0.0076557 58.116 By MS/MS By MS/MS 1 1 1502300 813740 688560 2567 489 2741 5751;5752 4686;4687;4688 4688 572 3 TSSTDEVLSLEEK ELKAPRARTSSTDEVL EVLSLEEKDLRDRERR R T S E K D 0 0 0 1 0 0 3 0 0 0 2 1 0 0 0 3 2 0 0 1 0 0 13 0 1436.6882 K7EMM4;K7ENH8;A0A0A0MRB7 K7EMM4 97 109 TCF3 yes no 2 0.0059853 58.676 By matching By MS/MS 1 1 1647800 775860 871970 2568 99 2742 5753;5754 4689 4689 123 1 TSSVVTLEVAK RAAELMTRTSSVVTLE VVTLEVAKQGAIYHGL R T S A K Q 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 2 2 0 0 3 0 0 11 0 1132.634 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1040 1050 MLLT4 Afadin yes no 2 0.00054545 97.779 By MS/MS By MS/MS 1 1 7335300 4477700 2857700 2569 242 2743 5755;5756 4690;4691 4690 299 2 TSVSQNVIPSSAQK PSVLLDAKTSVSQNVI VIPSSAQKRETYTFEN K T S Q K R 1 0 1 0 0 2 0 0 0 1 0 1 0 0 1 4 1 0 0 2 0 0 14 0 1444.7522 H0Y8J2;Q03188 H0Y8J2 74 87 CENPC Centromere protein C yes no 2 0.015583 47.545 By MS/MS By matching 1 1 1175400 599930 575500 2570 601 2744 5757;5758 4692 4692 1 TTHSPYEER SLSSDRGRTTHSPYEE THSPYEERSRTKGSGQ R T T E R S 0 1 0 0 0 0 2 0 1 0 0 0 0 0 1 1 2 0 1 0 0 0 9 0 1118.4993 Q8NDT2 Q8NDT2 606 614 RBM15B Putative RNA-binding protein 15B yes yes 2 0.017391 59.265 By MS/MS By matching 1 1 1451800 621010 830810 2571 1268 2745 5759;5760 4693 4693 1 TTKTPEDGDYSYEIIEK YSYETIGKTTKTPEDG YSYEIIEKTTRTPEEG K T T E K T 0 0 0 2 0 0 3 1 0 2 0 2 0 0 1 1 3 0 2 0 0 0 17 1 1987.9262 P46821 P46821 1929 1945 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.009621 50.376 By MS/MS By matching 1 1 743800 447930 295860 2572 968 2746 5761;5762 4694 4694 1101;2419;2420 0 TTNSSLEEIMDK SKDQGLQKTTNSSLEE SLEEIMDKAYDKFDVE K T T D K A 0 0 1 1 0 0 2 0 0 1 1 1 1 0 0 2 2 0 0 0 0 0 12 0 1366.6286 Q709C8 Q709C8 733 744 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 2 0.0080472 57.106 By MS/MS By matching 1 1 943080 589710 353370 2573 1210 2747 5763;5764 4695 4695 1415 1 TTPSYVAFTDTER IANDQGNRTTPSYVAF VAFTDTERLIGDAAKN R T T E R L 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 1 4 0 1 1 0 0 13 0 1486.694 E9PKE3;P11142;E9PNE6;P54652;E9PI65;E9PQQ4;E9PQK7;E9PK54;E9PLF4;A0A0G2JIW1;P0DMV9;P0DMV8 E9PKE3 37 49 HSPA8;HSPA2;HSPA1B;HSPA1A Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 0.019206 52.693 By MS/MS By matching 1 1 3257200 2232600 1024600 2574 458;176 2748 5765;5766 4696 4696 1 TTSAGTGGMWR CGTRSAGRTTSAGTGG AGTGGMWRFYTEDSPG R T T W R F 1 1 0 0 0 0 0 3 0 0 0 0 1 0 0 1 3 1 0 0 0 0 11 0 1123.508 P60468 P60468 47 57 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.0060121 66.267 By MS/MS By MS/MS 1 1 3445700 1933200 1512400 2575 1016 2749 5767;5768 4697;4698 4697 1165 2 TTSFAESCKPVQQPSAFGSMK ________________ PSAFGSMKVSRDKDGS R T T M K V 2 0 0 0 1 2 1 1 0 0 0 2 1 2 2 4 2 0 0 1 0 0 21 1 2287.0613 P49841 P49841 7 27 GSK3B Glycogen synthase kinase-3 beta yes yes 3 0.019412 41.084 By MS/MS By matching 1 1 3398000 1700500 1697500 2576 983 2750 5769;5770 4699 4699 1 TTSISPALAR IPPKVPQRTTSISPAL SISPALARKNSPGNGS R T T A R K 2 1 0 0 0 0 0 0 0 1 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1015.5662 Q9UKE5 Q9UKE5 676 685 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.0019526 77.062 By MS/MS By MS/MS 2 2 11124000 6205100 4918900 2577 1464 2751;2752 5771;5772;5773;5774 4700;4701;4702;4703;4704 4702 1772;1773 5 TVANLLSGKSPR MPHPATGKTVANLLSG LLSGKSPRKSAEPSAN K T V P R K 1 1 1 0 0 0 0 1 0 0 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1241.7092 J3KQ96;E7ETY2;Q13428 J3KQ96 147 158 TCOF1 Treacle protein yes no 2;3 0.0012705 95.236 By MS/MS By MS/MS 2 2 52410000 27930000 24480000 2578 422 2753 5775;5776;5777;5778 4705;4706;4707;4708 4707 487;488 4 TVDLDPGTLYVHSV PSRKSRAKTVDLDPGT GTLYVHSV________ K T V S V - 0 0 0 2 0 0 0 1 1 0 2 0 0 0 1 1 2 0 1 3 0 0 14 0 1514.7617 Q8WY07 Q8WY07 606 619 SLC7A3 Cationic amino acid transporter 3 yes yes 2 0.0031551 71.349 By MS/MS By matching 1 1 8740800 4852200 3888500 2579 1296 2754 5779;5780 4709 4709 2480 1 TVDLGISDLEDDC TTGKRTIKTVDLGISD ISDLEDDC________ K T V D C - 0 0 0 4 1 0 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 13 0 1450.6134 F5H5U2;Q8NHQ9 F5H5U2 557 569 DDX55 ATP-dependent RNA helicase DDX55 yes no 2 0.0046695 61.691 By MS/MS 1 3702900 0 3702900 2580 501 2755 5781 4710 4710 589 1 TVEVAEGEAVRTPQSVTAK EKPKPNGRTVEVAEGE TPQSVTAKQPPEIDKK R T V A K Q 3 1 0 0 0 1 3 1 0 0 0 1 0 0 1 1 3 0 0 4 0 0 19 1 1971.0273 E5RJU9;Q86UE4;H0YB56 E5RJU9 109 127 MTDH Protein LYRIC yes no 3 0.0090263 49.463 By MS/MS 1 2213700 2213700 0 2581 396 2756 5782 4711 4711 1974 1 TVHRSPLLLGAQR VPTASDSRTVHRSPLL PLLLGAQRRAVANGGT R T V Q R R 1 2 0 0 0 1 0 1 1 0 3 0 0 0 1 1 1 0 0 1 0 0 13 1 1446.8419 Q96DR7 Q96DR7 76 88 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 3 0.013557 48.823 By MS/MS 1 525110 525110 0 2582 1326 2757 5783 4712 4712 1 TVIIEQSWGSPK VTMGPKGRTVIIEQSW EQSWGSPKVTKDGVTV R T V P K V 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 2 1 1 0 1 0 0 12 0 1343.7085 P10809;C9JL25;E7EXB4;E7ESH4;C9JL19;C9JCQ4 P10809 61 72 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2 0.00077587 85.554 By MS/MS By MS/MS 2 1 6308600 3799700 2508900 2583 883 2758;2759 5784;5785;5786 4713;4714;4715 4714 1010 3 TVLIMELINNVAK FGGAGVGKTVLIMELI ELINNVAKAHGGYSVF K T V A K A 1 0 2 0 0 0 1 0 0 2 2 1 1 0 0 0 1 0 0 2 0 0 13 0 1456.8323 P06576;F8W0P7;F8W079;H0YH81;H0YI37 P06576 213 225 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 0.002145 69.979 By MS/MS By MS/MS 1 2 1134100 175870 958190 2584 859 2760;2761 5787;5788;5789 4716;4717 4716 135 2 TVMDGGLESDGPNMTENGLEDESRPQR RRRTDEDRTVMDGGLE EDESRPQRRNRSRRRR R T V Q R R 0 2 2 3 0 1 4 4 0 0 2 0 2 0 2 2 2 0 0 1 0 0 27 1 2933.2767 P51116 P51116 558 584 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 0.001245 47.058 By MS/MS By matching 1 1 1745200 951280 793940 2585 991 2762 5790;5791 4718 4718 175;176 1138 1 TVSASSTGDLPK SPSHDRSRTVSASSTG SSTGDLPKAKTRAADL R T V P K A 1 0 0 1 0 0 0 1 0 0 1 1 0 0 1 3 2 0 0 1 0 0 12 0 1161.5877 H7C5L6;P78362 H7C5L6 99 110 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 2 2.8663E-26 120.55 By MS/MS By MS/MS 3 3 6926300 3540500 3385800 2586 685 2763;2764 5792;5793;5794;5795;5796;5797 4719;4720;4721;4722;4723;4724 4722 807;808;809;2057 5 TVSDNSLSNSR DYTQPMKRTVSDNSLS DNSLSNSRGEGKPDLK R T V S R G 0 1 2 1 0 0 0 0 0 0 1 0 0 0 0 4 1 0 0 1 0 0 11 0 1178.5527 B7ZL14;H0Y7W6;Q96RU3 B7ZL14 294 304 FNBP1 Formin-binding protein 1 yes no 2 0.0054847 67.252 By MS/MS By MS/MS 2 2 3077100 1590300 1486700 2587 297 2765 5798;5799;5800;5801 4725;4726;4727 4727 354 3 TVSFEALPIMR NRYTNTSKTVSFEALP FEALPIMRNEPSSYCS K T V M R N 1 1 0 0 0 0 1 0 0 1 1 0 1 1 1 1 1 0 0 1 0 0 11 0 1262.6693 O15084 O15084 1009 1019 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 0.0075148 63.727 By MS/MS By matching 1 1 1056900 451580 605310 2588 768 2766 5802;5803 4728 4728 121 896 1 TVSSPPTSPRPGSAATVSASTSNIIPPR SSELDASKTVSSPPTS TSNIIPPRHQKPAGAP K T V P R H 3 2 1 0 0 0 0 1 0 2 0 0 0 0 6 7 4 0 0 2 0 0 28 1 2734.425 O76094 O76094 618 645 SRP72 Signal recognition particle subunit SRP72 yes yes 3 6.9557E-05 55.061 By MS/MS By MS/MS 1 1 7357200 4298400 3058800 2589 806 2767 5804;5805 4729;4730 4730 949;950;951;2089;2090 2 TVTAMDVVYALK YTEHAKRKTVTAMDVV MDVVYALKRQGRTLYG K T V L K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 1 3 0 0 12 0 1309.6952 P62805 P62805 81 92 HIST1H4A Histone H4 yes yes 2 0.016941 51.092 By MS/MS By matching 1 1 776120 527000 249120 2590 1025 2768 5806;5807 4731 4731 186 0 TVTIWEIINSEYFTAEQR PFGKFQGKTVTIWEII EYFTAEQRRDLLRQFR K T V Q R R 1 1 1 0 0 1 3 0 0 3 0 0 0 1 0 1 3 1 1 1 0 0 18 0 2199.0848 Q15149 Q15149 3058 3075 PLEC Plectin yes yes 2 3.1545E-155 182.89 By MS/MS 1 9295100 0 9295100 2591 1120 2769 5808 4732 4732 1 TYASGYAHYEEQEN FTNLNLGRTYASGYAH AHYEEQEN________ R T Y E N - 2 0 1 0 0 1 3 1 1 0 0 0 0 0 0 1 1 0 3 0 0 0 14 0 1660.6641 Q9Y3S2 Q9Y3S2 307 320 ZNF330 Zinc finger protein 330 yes yes 2 0.0024744 66.595 By matching By MS/MS 1 1 5413900 2691400 2722500 2592 1506 2770 5809;5810 4733 4733 1851 1 TYIDPETYEDPNR HFKFPGTKTYIDPETY ETYEDPNRAVHQFAKE K T Y N R A 0 1 1 2 0 0 2 0 0 1 0 0 0 0 2 0 2 0 2 0 0 0 13 0 1611.7053 Q15375 Q15375 607 619 EPHA7 Ephrin type-A receptor 7 yes yes 2 0.0099638 45.368 By MS/MS By MS/MS 1 1 1139100 723650 415400 2593 1123 2771 5811;5812 4734;4735 4734 2161;2162 2 TYSYLTPDLWK ATFDAISKTYSYLTPD YLTPDLWKETVFTKSP K T Y W K E 0 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 2 1 2 0 0 0 11 0 1385.6867 H0YEN5;P15880;E9PQD7 H0YEN5 149 159 RPS2 40S ribosomal protein S2 yes no 2 0.0031897 89.189 By MS/MS By matching 1 1 1727700 1338900 388810 2594 615 2772 5813;5814 4736 4736 2044 1 TYWIIIELK ITCSERVRTYWIIIEL YWIIIELKHKAREKPY R T Y L K H 0 0 0 0 0 0 1 0 0 3 1 1 0 0 0 0 1 1 1 0 0 0 9 0 1177.6747 B5MCA4;P16422 B5MCA4 169 177 EPCAM Epithelial cell adhesion molecule yes no 2 0.0082253 77.318 By MS/MS 1 1630800 0 1630800 2595 277 2773 5815 4737 4737 1 VAAAAGSGPSPPGSPGHDRER QVPGGAVRVAAAAGSG SPGHDRERQPLLDRAR R V A E R Q 4 2 0 1 0 0 1 4 1 0 0 0 0 0 4 3 0 0 0 1 0 0 21 1 1971.9511 Q9BTU6 Q9BTU6 38 58 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes yes 3 0.0054188 51.089 By MS/MS By matching 1 1 3717600 2582900 1134700 2596 1364 2774 5816;5817 4738;4739 4738 1627;1628;1629 2 VAAETQSPSLFGSTK NSESESNKVAAETQSP PSLFGSTKLQQESTFL K V A T K L 2 0 0 0 0 1 1 1 0 0 1 1 0 1 1 3 2 0 0 1 0 0 15 0 1521.7675 Q9UKX7 Q9UKX7 215 229 NUP50 Nuclear pore complex protein Nup50 yes yes 2 7.3438E-13 108.71 By MS/MS By MS/MS 1 1 14770000 8032500 6737500 2597 1468 2775 5818;5819 4740;4741;4742 4741 1778;1779 3 VAASPKSPTAALNESLVECPK GETENREKVAASPKSP ESLVECPKCNIQYPAT K V A P K C 4 0 1 0 1 0 2 0 0 0 2 2 0 0 3 3 1 0 0 2 0 0 21 1 2168.1147 Q53EZ4 Q53EZ4 422 442 CEP55 Centrosomal protein of 55 kDa yes yes 3 0.0018121 59.646 By MS/MS By matching 1 1 3123500 1890300 1233200 2598 1150 2776 5820;5821 4743 4743 1341;2171 1 VADLTEQYNEQYGAVR CPIDRSGRVADLTEQY NEQYGAVRTPYTMSYG R V A V R T 2 1 1 1 0 2 2 1 0 0 1 0 0 0 0 0 1 0 2 2 0 0 16 0 1854.8748 Q9BWF3 Q9BWF3 183 198 RBM4 RNA-binding protein 4 yes yes 2 0.0023758 65.179 By MS/MS By matching 1 1 3344100 2000800 1343300 2599 1373 2777 5822;5823 4744 4744 2494 1 VADPDHDHTGFLTEYVATR ICDFGLARVADPDHDH LTEYVATRWYRAPEIM R V A T R W 2 1 0 3 0 0 1 1 2 0 1 0 0 1 1 0 3 0 1 2 0 0 19 0 2142.997 P28482 P28482 173 191 MAPK1 Mitogen-activated protein kinase 1 yes yes 3;4 5.7027E-33 132.64 By MS/MS By MS/MS 3 3 146620000 88746000 57877000 2600 935 2778;2779 5824;5825;5826;5827;5828;5829 4745;4746;4747;4748;4749 4747 2119;2404 5 VAEGTQVLELPFKGDDITMVLILPKPEK EGKFRYRRVAEGTQVL LILPKPEKSLAKVEKE R V A E K S 1 0 0 2 0 1 3 2 0 2 4 3 1 1 3 0 2 0 0 3 0 0 28 2 3079.6879 P01008 P01008 295 322 SERPINC1 Antithrombin-III yes yes 4 0.020143 21.462 By MS/MS 1 1157200 0 1157200 2601 835 2780 5830 4750 4750 1 VALENDDRSEEEKYTAVQR SSAQYKARVALENDDR EKYTAVQRNSSEREGH R V A Q R N 2 2 1 2 0 1 4 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 19 2 2251.0717 F8VRK6;H0YH87;F8WB06;F8VQP2;V9GY86;Q99700 F8VRK6 57 75 ATXN2 Ataxin-2 yes no 3 5.6669E-05 82.121 By MS/MS By matching 1 1 3651000 2267100 1383900 2602 512 2781 5831;5832 4751 4751 2342 1 VALSDDETKETENMR KEKKRGKRVALSDDET TKETENMRKKRRRIKL R V A M R K 1 1 1 2 0 0 3 0 0 0 1 1 1 0 0 1 2 0 0 1 0 0 15 1 1736.7887 H0YD46;Q15054 H0YD46 28 42 POLD3 DNA polymerase delta subunit 3 yes no 2 0.0022681 71.529 By MS/MS By matching 1 1 32032000 14905000 17127000 2603 613 2782 5833;5834 4752 4752 734 1 VALTGLTVAEYFR EPPGARARVALTGLTV LTVAEYFRDQEGQDVL R V A F R D 2 1 0 0 0 0 1 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1438.782 P06576;F8W0P7;H0YH81 P06576 282 294 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 2.9856E-09 113.63 By MS/MS By MS/MS 1 1 4927700 3051100 1876600 2604 859 2783 5835;5836 4753;4754 4754 2 VAPDEHPILLTEAPLNPK HTFYNELRVAPDEHPI TEAPLNPKINREKMTQ R V A P K I 2 0 1 1 0 0 2 0 1 1 3 1 0 0 4 0 1 0 0 1 0 0 18 0 1953.0571 Q562R1 Q562R1 97 114 ACTBL2 Beta-actin-like protein 2 yes yes 3 0.0079432 42.708 By MS/MS By MS/MS 1 1 4778700 3779100 999530 2605 1154 2784 5837;5838 4755;4756 4756 2 VAPVINNGSPTILGK LSSLTPAKVAPVINNG GSPTILGKRSYEQHNG K V A G K R 1 0 2 0 0 0 0 2 0 2 1 1 0 0 2 1 1 0 0 2 0 0 15 0 1478.8457 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 360 374 MTA1 Metastasis-associated protein MTA1 yes no 2 0.0014235 78.191 By MS/MS By matching 1 1 6059600 3405000 2654600 2606 419 2785 5839;5840 4757 4757 477 1 VASEAPLEHKPQVEASSPR YEELQGLKVASEAPLE QVEASSPRLNPAVTCA K V A P R L 3 1 0 0 0 1 3 0 1 0 1 1 0 0 3 3 0 0 0 2 0 0 19 1 2031.0385 Q8TD19 Q8TD19 853 871 NEK9 Serine/threonine-protein kinase Nek9 yes yes 3 6.9766E-05 81.226 By MS/MS By MS/MS 1 1 15764000 12608000 3155500 2607 1280 2786 5841;5842 4758;4759 4758 1513 2 VASPSQGQVGSSSPK TLTDAQTRVASPSQGQ QVGSSSPKRSGMTAVP R V A P K R 1 0 0 0 0 2 0 2 0 0 0 1 0 0 2 5 0 0 0 2 0 0 15 0 1414.7052 Q99569;A0A0D9SF60 Q99569 325 339 PKP4 Plakophilin-4 yes no 2 0.0011946 73.951 By MS/MS By matching 1 1 1112600 601530 511030 2608 1356 2787 5843;5844 4760 4760 1612;1613;1614 1 VASSPVMVSNPATR TTLPATVKVASSPVMV MVSNPATRMLKTAAAQ K V A T R M 2 1 1 0 0 0 0 0 0 0 0 0 1 0 2 3 1 0 0 3 0 0 14 0 1414.7238 A6NEM2;P51610 A6NEM2 595 608 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.017286 46.73 By MS/MS By MS/MS 1 1 5677900 3221000 2456900 2609 230 2788 5845;5846 4761;4762 4761 38 2 VATVSLPR SPATLNSRVATVSLPR VATVSLPRSCAAAGTE R V A P R S 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 8 0 841.50215 CON__P00761 CON__P00761 108 115 yes yes 2 0.0079782 101.28 By MS/MS By MS/MS 1 1 7922300 6936300 985960 + 2610 350 2789 5847;5848 4763;4764;4765 4764 3 VAVATPAKK VVVSPTKKVAVATPAK AVATPAKKAAVTPGKK K V A K K A 3 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 1 0 0 2 0 0 9 1 883.5491 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 72 80 NCL Nucleolin yes no 2 0.0195 69.721 By MS/MS By MS/MS 1 1 7822000 4410000 3412000 2611 914 2790 5849;5850 4766;4767 4767 0 VDDDSLGEFPVTNSR KRGAPDPRVDDDSLGE EFPVTNSRARKRILEP R V D S R A 0 1 1 3 0 0 1 1 0 0 1 0 0 1 1 2 1 0 0 2 0 0 15 0 1649.7533 J3KMZ8;Q92785 J3KMZ8 138 152 DPF2 Zinc finger protein ubi-d4 yes no 2 3.28E-08 102.5 By MS/MS By MS/MS 1 1 4439500 2619700 1819900 2612 699 2791 5851;5852 4768;4769 4768 826 2 VDDKPSSPGDSSKK ERERGTSRVDDKPSSP SPGDSSKKRG______ R V D K K R 0 0 0 3 0 0 0 1 0 0 0 3 0 0 2 4 0 0 0 1 0 0 14 2 1445.6998 C9JM54;C9J6K3;Q9HC52 C9JM54 160 173 CBX8 Chromobox protein homolog 8 yes no 3 0.0029007 74.726 By MS/MS By matching 1 1 2283800 1151400 1132500 2613 322 2792 5853;5854 4770 4770 386 1 VDIIPGFEFDR FPELKKKRVDIIPGFE IPGFEFDRWLNTPGWP R V D D R W 0 1 0 2 0 0 1 1 0 2 0 0 0 2 1 0 0 0 0 1 0 0 11 0 1306.6558 A6NKB8;Q9H4A4 A6NKB8 432 442 RNPEP Aminopeptidase B yes no 3 0.0086158 50.353 By MS/MS By matching 1 1 821850 444530 377320 2614 232 2793 5855;5856 4771 4771 1 VDKDLQSLEDILHQVENK FLSTYQTKVDKDLQSL ILHQVENKTSEVKQLI K V D N K T 0 0 1 3 0 2 2 0 1 1 3 2 0 0 0 1 0 0 0 2 0 0 18 1 2122.0906 C9JEU5;C9JC84;P02679 C9JEU5 62 79 FGG Fibrinogen gamma chain yes no 3 2.6562E-05 84.41 By MS/MS By matching 1 1 2255800 1244300 1011500 2615 328 2794 5857;5858 4772 4772 1 VDNDENEHQLSLR ADKDYHFKVDNDENEH NEHQLSLRTVSLGAGA K V D L R T 0 1 2 2 0 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1567.7227 P06748;E5RGW4 P06748 33 45 NPM1 Nucleophosmin yes no 3 0.0023337 66.004 By MS/MS By MS/MS 1 1 1991600 1207800 783810 2616 861 2795 5859;5860 4773;4774 4774 2 VDNKRFYFDVGSNK LPEGTSFRVDNKRFYF YFDVGSNKYGIFLKVS R V D N K Y 0 1 2 2 0 0 0 1 0 0 0 2 0 2 0 1 0 0 1 2 0 0 14 2 1687.8318 Q9UJV8 Q9UJV8 269 282 PURG Purine-rich element-binding protein gamma yes yes 2 0.01225 50.108 By MS/MS 1 0 0 0 2617 1461 2796 5861 4775 4775 1766 1 VDNLTYRTSPDTLR VEGMTSLKVDNLTYRT RTSPDTLRRVFEKYGR K V D L R R 0 2 1 2 0 0 0 0 0 0 2 0 0 0 1 1 3 0 1 1 0 0 14 1 1649.8373 Q01130;J3QL05;J3KP15 Q01130 18 31 SRSF2 Serine/arginine-rich splicing factor 2 yes no 3 0.0018948 68.277 By MS/MS 1 2208200 2208200 0 2618 1038 2797 5862 4776 4776 1182 1 VDQSAVGFEYQGKTEK KFGVQMDRVDQSAVGF EYQGKTEKHASQKDYS R V D E K H 1 0 0 1 0 2 2 2 0 0 0 2 0 1 0 1 1 0 1 2 0 0 16 1 1784.8581 Q14247 Q14247 132 147 CTTN Src substrate cortactin yes yes 2 0.01186 56.551 By MS/MS 1 0 0 0 2619 1098 2798 5863 4777 4777 2454 1 VDSEGDFSENDDAAGDFR EPDTKLARVDSEGDFS DDAAGDFRSGDEEFKG R V D F R S 2 1 1 5 0 0 2 2 0 0 0 0 0 2 0 2 0 0 0 1 0 0 18 0 1944.761 M0QYL4;O43823 M0QYL4 135 152 AKAP8 A-kinase anchor protein 8 yes no 2 0.0091975 48.659 By MS/MS By matching 1 1 683830 322640 361190 2620 744 2799 5864;5865 4778 4778 861 1 VDSPLPSDKAPTPPGK DEEESGAKVDSPLPSD KAPTPPGKGAAPESSL K V D G K G 1 0 0 2 0 0 0 1 0 0 1 2 0 0 5 2 1 0 0 1 0 0 16 1 1604.841 Q12893 Q12893 318 333 TMEM115 Transmembrane protein 115 yes yes 3 0.0086607 50.938 By MS/MS 1 343470 343470 0 2621 1070 2800 5866 4779 4779 2147 1 VDSTTCLFPVEEK KGSCNLSRVDSTTCLF CLFPVEEKAVEYYFAS R V D E K A 0 0 0 1 1 0 2 0 0 0 1 1 0 1 1 1 2 0 0 2 0 0 13 0 1523.7178 Q06210 Q06210 259 271 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 1.4451E-09 115.8 By matching By MS/MS 1 1 21539000 12710000 8829000 2622 1055 2801 5867;5868 4780 4780 1210 1 VDVSCEPLEGVEK DVKEPSPRVDVSCEPL EPLEGVEKCSDSQSWE R V D E K C 0 0 0 1 1 0 3 1 0 0 1 1 0 0 1 1 0 0 0 3 0 0 13 0 1459.6865 Q12888;A6NNK5;C9JXV0;H7C3N7 Q12888 768 780 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.010916 52.576 By MS/MS 1 338520 0 338520 2623 1069 2802 5869 4781 4781 1229 1 VDYVVVDQQK GSSVADERVDYVVVDQ YVVVDQQKTLALKSTR R V D Q K T 0 0 0 2 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 4 0 0 10 0 1191.6136 B7Z3B9;Q13480 B7Z3B9 554 563 GAB1 GRB2-associated-binding protein 1 yes no 2 0.0063212 70.1 By matching By MS/MS 1 1 1338600 640330 698240 2624 285 2803 5870;5871 4782 4782 2304 1 VEEEQEADEEDVSEEEAESK ESAQPLKKVEEEQEAD SEEEAESKEGTNKDFP K V E S K E 2 0 0 2 0 1 10 0 0 0 0 1 0 0 0 2 0 0 0 2 0 0 20 0 2308.919 Q9H3N1 Q9H3N1 235 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.0025132 61.957 By MS/MS By matching 1 1 15122000 8416800 6705100 2625 1396 2804 5872;5873 4783 4783 1684 1 VEEFLYEKLDR ________________ FLYEKLDRKVPSRVTN - V E D R K 0 1 0 1 0 0 3 0 0 0 2 1 0 1 0 0 0 0 1 1 0 0 11 1 1439.7296 H7C1Z6;F8WFB9;B7ZC39;B7ZC38;Q9NR46 H7C1Z6 1 11 SH3GLB2 Endophilin-B2 yes no 2 1.1139E-05 111.46 By MS/MS By MS/MS 1 1 2580400 1334000 1246400 2626 294 2805 5874;5875 4784;4785 4785 2305 2 VEGDNIYVR EGKKNSLRVEGDNIYV EGDNIYVRHSNLMLEE R V E V R H 0 1 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 2 0 0 9 0 1063.5298 O43491;H0Y5B0;E9PMV8;E9PPC9;Q6ZSX4 O43491 617 625 EPB41L2 Band 4.1-like protein 2 yes no 2 0.00019732 121.09 By MS/MS By MS/MS 1 1 47852000 25049000 22803000 2627 783 2806 5876;5877 4786;4787 4787 2388 2 VEKIGEGTYGVVYK ________________ GTYGVVYKARNKLTGE K V E Y K A 0 0 0 0 0 0 2 3 0 1 0 2 0 0 0 0 1 0 2 3 0 0 14 1 1540.8137 G3V317;K7ELV5;E7ESI2;G3V5T9;P24941;Q00526 G3V317 7 20 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 3 0.0046086 57.267 By MS/MS By MS/MS 1 1 1279800 601690 678100 2628 416 2807 5878;5879 4788;4789 4788 1981;2329;2330 2 VELQELNDR KNTRTNEKVELQELND ELQELNDRFANYIDKV K V E D R F 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1114.5619 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;P17661 P08670 105 113 VIM;DES Vimentin;Desmin yes no 2 0.014205 69.628 By MS/MS By MS/MS 1 1 2181700 1266200 915530 2629 874 2808 5880;5881 4790;4791 4790 2 VEQALSEVASSLQSSAPK ATSVAASRVEQALSEV SLQSSAPKQGPLHPWM R V E P K Q 3 0 0 0 0 2 2 0 0 0 2 1 0 0 1 5 0 0 0 2 0 0 18 0 1829.9371 H0YK02;H0YJS2;A0A0C4DGK5;Q86TV6 H0YK02 77 94 TTC7B Tetratricopeptide repeat protein 7B yes no 2 0.0085165 49.243 By matching By MS/MS 1 1 1381500 648910 732560 2630 160 2809 5882;5883 4792 4792 203;204 1 VEQMPQASPGLAPR SGELVEPRVEQMPQAS ASPGLAPRTRGSSGPQ R V E P R T 2 1 0 0 0 2 1 1 0 0 1 0 1 0 3 1 0 0 0 1 0 0 14 0 1479.7504 Q8N3F8;H0Y6J8 Q8N3F8 571 584 MICALL1 MICAL-like protein 1 yes no 2 0.0033802 60.55 By MS/MS By MS/MS 1 1 2064700 940710 1124000 2631 1253 2810 5884;5885 4793;4794 4794 1479 2 VFAVVITDGR ESRRQKTRVFAVVITD AVVITDGRHDPRDDDL R V F G R H 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 3 0 0 10 0 1075.6026 P12110 P12110 725 734 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.0010384 88.948 By MS/MS By MS/MS 1 1 12403000 8528800 3873900 2632 893 2811 5886;5887 4795;4796 4796 2 VFDDESDEKEDEEYADEKGLEAADK EEEDTYEKVFDDESDE KGLEAADKKAEEGDAD K V F D K K 3 0 0 6 0 0 7 1 0 0 1 3 0 1 0 1 0 0 1 1 0 0 25 2 2875.2043 O43719 O43719 637 661 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.0070634 49.076 By MS/MS By matching 1 1 3451600 2101200 1350400 2633 785 2812 5888;5889 4797 4797 917 1 VFDEFKPLVEEPQNLIK DPHECYAKVFDEFKPL EEPQNLIKQNCELFEQ K V F I K Q 0 0 1 1 0 1 3 0 0 1 2 2 0 2 2 0 0 0 0 2 0 0 17 1 2044.0881 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 397 413 ALB Serum albumin yes no 3 0.00058551 66.826 By MS/MS 1 2333200 0 2333200 + 2634 152 2813 5890 4798 4798 1 VFDKDGNGYISAAELR EEIREAFRVFDKDGNG YISAAELRHVMTNLGE R V F L R H 2 1 1 2 0 0 1 2 0 1 1 1 0 1 0 1 0 0 1 1 0 0 16 1 1753.8635 G3V361;Q96HY3;P0DP25;P0DP24;P0DP23;E7ETZ0;H0Y7A7;E7EMB3 G3V361 56 71 CALM1;CALM2 yes no 2 2.4667E-07 98.902 By MS/MS By MS/MS 2 2 6503100 3895900 2607200 2635 398 2814;2815 5891;5892;5893;5894 4799;4800 4799 2327 2 VFDLQFSTDSPR RLQRRRSRVFDLQFST QFSTDSPRLLASPSSR R V F P R L 0 1 0 2 0 1 0 0 0 0 1 0 0 2 1 2 1 0 0 1 0 0 12 0 1410.6779 C9JZP1;C9J470;E9PHA2;Q15003 C9JZP1 72 83 NCAPH Condensin complex subunit 2 yes no 2 0.019859 68.83 By MS/MS By matching 1 1 1144500 597130 547400 2636 319 2816 5895;5896 4801 4801 1 VFEVSLADLQNDEVAFR ASDGLKGRVFEVSLAD QNDEVAFRKFKLITED R V F F R K 2 1 1 2 0 1 2 0 0 0 2 0 0 2 0 1 0 0 0 3 0 0 17 0 1950.9687 D6RAT0;P61247;D6RGE0;D6RI02;D6RED7;D6RAS7;H0Y8L7;D6RB09;E9PFI5;D6RG13 D6RAT0 29 45 RPS3A 40S ribosomal protein S3a yes no 2 5.8615E-11 104.41 By MS/MS By matching 1 1 6330700 5224400 1106300 2637 369 2817 5897;5898 4802 4802 1 VFLENVIR EETRGVLKVFLENVIR VFLENVIRDAVTYTEH K V F I R D 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 8 0 988.57057 P62805 P62805 61 68 HIST1H4A Histone H4 yes yes 2 0.014497 124.89 By MS/MS By matching 1 1 3512900 2612500 900470 2638 1025 2818 5899;5900 4803 4803 1 VFSNGADLSGVTEEAPLK LGQLGITKVFSNGADL VTEEAPLKLSKAVHKA K V F L K L 2 0 1 1 0 0 2 2 0 0 2 1 0 1 1 2 1 0 0 2 0 0 18 0 1832.9156 P01009;A0A0G2JRN3;A0A024R6I7 P01009 335 352 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.003575 69.602 By MS/MS By MS/MS 2 2 5439100 3861500 1577600 2639 836 2819;2820 5901;5902;5903;5904 4804;4805 4805 2 VFSVAITPDHLEPR EAKHLGVKVFSVAITP TPDHLEPRLSIIATDH K V F P R L 1 1 0 1 0 0 1 0 1 1 1 0 0 1 2 1 1 0 0 2 0 0 14 0 1579.8358 A0A087X0S5;P12109 A0A087X0S5 186 199 COL6A1 Collagen alpha-1(VI) chain yes no 3 0.019727 90.614 By MS/MS 1 326510 326510 0 2640 74 2821 5905 4806 4806 0 VGDGDLSAEEIPENEVSLR TMEEQKTKVGDGDLSA PENEVSLRRAVSKKKT K V G L R R 1 1 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 0 19 0 2027.9647 Q14684 Q14684 239 257 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.0077166 49.537 By MS/MS By MS/MS 1 1 8570900 4699300 3871600 2641 1106 2822 5906;5907 4807;4808 4808 1288 2 VGDTEKPEPERSPPNR EPKARPLRVGDTEKPE PERSPPNRKRPANEKA R V G N R K 0 2 1 1 0 0 3 1 0 0 0 1 0 0 4 1 1 0 0 1 0 0 16 2 1806.886 Q9NZ63 Q9NZ63 250 265 C9orf78 Uncharacterized protein C9orf78 yes yes 3 0.0004191 83.877 By MS/MS By MS/MS 1 1 23282000 14091000 9190900 2642 1444 2823 5908;5909 4809;4810 4809 1750 2 VGDVTPQVK KAAPAPGKVGDVTPQV GDVTPQVKGGALPPAK K V G V K G 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 1 0 0 3 0 0 9 0 941.5182 J3KQ96;E7ETY2;Q13428 J3KQ96 245 253 TCOF1 Treacle protein yes no 2 0.00010824 91.701 By MS/MS 1 0 0 0 2643 422 2824 5910 4811 4811 1985 1 VGEEEHVYSFPNK SVGSPCSRVGEEEHVY HVYSFPNKQKSAEPSP R V G N K Q 0 0 1 0 0 0 3 1 1 0 0 1 0 1 1 1 0 0 1 2 0 0 13 0 1533.71 F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023 F5H836 112 124 PXN Paxillin yes no 2;3 8.2421E-11 134.2 By MS/MS By MS/MS 2 2 9849200 4507700 5341600 2644 210 2825 5911;5912;5913;5914 4812;4813;4814;4815 4813 264;2284 4 VGEEEHVYSFPNKQK SVGSPCSRVGEEEHVY YSFPNKQKSAEPSPTV R V G Q K S 0 0 1 0 0 1 3 1 1 0 0 2 0 1 1 1 0 0 1 2 0 0 15 1 1789.8635 F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023 F5H836 112 126 PXN Paxillin yes no 3 0.0012354 62.081 By MS/MS By matching 1 1 5111800 3376000 1735800 2645 210 2826 5915;5916 4816 4816 264;2284 1 VGFQYEGTYK EADELMKRVGFQYEGT FQYEGTYKWVNPHKL_ R V G Y K W 0 0 0 0 0 1 1 2 0 0 0 1 0 1 0 0 1 0 2 1 0 0 10 0 1190.5608 P11413 P11413 499 508 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 2 0.0031325 88.37 By MS/MS By MS/MS 1 1 949620 519830 429800 2646 889 2827 5917;5918 4817;4818 4817 2108;2399 2 VGGHAAEYGAEALER NVKAAWGKVGGHAAEY YGAEALERMFLSFPTT K V G E R M 4 1 0 0 0 0 3 3 1 0 1 0 0 0 0 0 0 0 1 1 0 0 15 0 1528.727 CON__P01966 CON__P01966 18 32 yes yes 3 0.00063879 55.335 By MS/MS By MS/MS 1 1 939100 650030 289070 + 2647 351 2828 5919;5920 4819;4820 4820 1 VGGSDEEASGIPSR LEGMKKARVGGSDEEA EASGIPSRTASLELDL R V G S R T 1 1 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 14 0 1359.6266 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 H7C446 116 129 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2 1.6654E-200 204.17 By MS/MS By MS/MS 1 1 61927000 31176000 30751000 2648 134 2829 5921;5922 4821;4822;4823 4821 165 3 VGGSSVDLHR YGPQPQVRVGGSSVDL GSSVDLHRFHPEPYGL R V G H R F 0 1 0 1 0 0 0 2 1 0 1 0 0 0 0 2 0 0 0 2 0 0 10 0 1025.5254 C9JZR2;O60716;E9PRE2 C9JZR2 265 274 CTNND1 Catenin delta-1 yes no 2 0.002132 77.674 By MS/MS By MS/MS 2 2 3887900 2264000 1623900 2649 348 2830 5923;5924;5925;5926 4824;4825;4826 4826 416;417 3 VGIFPSNYVTPR WTGQLNQRVGIFPSNY PSNYVTPRSAFSSRCQ R V G P R S 0 1 1 0 0 0 0 1 0 1 0 0 0 1 2 1 1 0 1 2 0 0 12 0 1348.7139 J3KPI6;P80192 J3KPI6 103 114 MAP3K9 Mitogen-activated protein kinase kinase kinase 9 yes no 2 0.012227 45.997 By MS/MS By matching 1 1 29543000 16685000 12858000 2650 703 2831 5927;5928 4827 4827 830;2368 1 VGLQVVAVK TLVLNRLKVGLQVVAV GLQVVAVKAPGFGDNR K V G V K A 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 4 0 0 9 0 911.5804 P10809 P10809 293 301 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0082303 77.282 By MS/MS 1 317840 317840 0 2651 883 2832 5929 4828 4828 1 VGNESPVQELK ETENTAYKVGNESPVQ ESPVQELKQDVSKKII K V G L K Q 0 0 1 0 0 1 2 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 11 0 1198.6194 Q5JSH3 Q5JSH3 46 56 WDR44 WD repeat-containing protein 44 yes yes 2 0.00016588 100.93 By MS/MS By MS/MS 1 1 16139000 8489100 7649600 2652 1156 2833 5930;5931 4829;4830 4830 1348 2 VGSLDNVGHLPAGGAVK FKEKAQAKVGSLDNVG LPAGGAVKTEGGGSEA K V G V K T 2 0 1 1 0 0 0 4 1 0 2 1 0 0 1 1 0 0 0 3 0 0 17 0 1589.8526 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4 E7EVA0 2216 2232 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 1.4408E-68 161.08 By MS/MS By MS/MS 2 2 42725000 25083000 17642000 2653 427 2834 5932;5933;5934;5935 4831;4832;4833 4832 502 3 VGSLTPPSSPK PPAVQGQKVGSLTPPS LTPPSSPKTQRAGHRR K V G P K T 0 0 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 1 0 0 11 0 1068.5815 E9PG46;Q2M2I8 E9PG46 616 626 AAK1 AP2-associated protein kinase 1 yes no 2 0.00072647 90.697 By MS/MS By MS/MS 1 1 4161600 2257900 1903700 2654 445 2835 5936;5937 4834;4835 4834 520;1992 2 VGSLTPPSSPKTQR PPAVQGQKVGSLTPPS PSSPKTQRAGHRRILS K V G Q R A 0 1 0 0 0 1 0 1 0 0 1 1 0 0 3 3 2 0 0 1 0 0 14 1 1453.7889 E9PG46;Q2M2I8 E9PG46 616 629 AAK1 AP2-associated protein kinase 1 yes no 2 0.002834 67.095 By MS/MS 1 1221900 0 1221900 2655 445 2836 5938 4836 4836 520;1992 1 VGVEASEETPQTSSSSARPGTPSDHQSQEASQFER KEGEKTDRVGVEASEE QEASQFERKDEPKTEQ R V G E R K 3 2 0 1 0 4 5 2 1 0 0 0 0 1 3 8 3 0 0 2 0 0 35 1 3702.663 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1 I1E4Y6 384 418 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 4 5.2966E-19 74.838 By MS/MS By matching 1 1 30966000 19645000 11321000 2656 687 2837 5939;5940 4837 4837 2059 1 VGVNDFCPMGFGVK LHSNNITKVGVNDFCP CPMGFGVKRAYYNGIS K V G V K R 0 0 1 1 1 0 0 3 0 0 0 1 1 2 1 0 0 0 0 3 0 0 14 0 1525.7058 P21810 P21810 315 328 BGN Biglycan yes yes 2 0.0025401 66.056 By MS/MS 1 464430 464430 0 2657 921 2838 5941 4838 4838 161 1 VGVVQYSHEGTFEAIQLDDER PKSETGTRVGVVQYSH AIQLDDERIDSLSSFK R V G E R I 1 1 0 2 0 2 3 2 1 1 1 0 0 1 0 1 1 0 1 3 0 0 21 0 2391.1343 P12110;H7C0M5 P12110 660 680 COL6A2 Collagen alpha-2(VI) chain yes no 3 2.8839E-36 114.88 By MS/MS By MS/MS 1 1 4348400 2769100 1579300 2658 893 2839 5942;5943 4839;4840 4839 2 VGYYVNNEYLNPELR YHGQEFIRVGYYVNNE EYLNPELRENPPMKPD R V G L R E 0 1 3 0 0 0 2 1 0 0 2 0 0 0 1 0 0 0 3 2 0 0 15 0 1841.8948 K7ELW9;Q9NVP2 K7ELW9 109 123 ASF1B Histone chaperone ASF1B yes no 2 0.017402 40.715 By MS/MS 1 0 0 0 2659 732 2840 5944 4841 4841 2372;2373;2374 1 VHAYFAPVTPPPSVGGSR RTHLPNIKVHAYFAPV PPSVGGSRQRFCRCCI K V H S R Q 2 1 0 0 0 0 0 2 1 0 0 0 0 1 4 2 1 0 1 3 0 0 18 0 1837.9475 J3KTA1;Q96IG2 J3KTA1 411 428 FBXL20 F-box/LRR-repeat protein 20 yes no 3 0.011252 49.768 By MS/MS By matching 1 1 928240 644780 283460 2660 714 2841 5945;5946 4842 4842 2065 0 VHGEPTSDLSDID RAMNHLSRVHGEPTSD TSDLSDID________ R V H I D - 0 0 0 3 0 0 1 1 1 1 1 0 0 0 1 2 1 0 0 1 0 0 13 0 1383.6154 O95696 O95696 1046 1058 BRD1 Bromodomain-containing protein 1 yes yes 2 0.0019746 71.268 By MS/MS By MS/MS 1 1 8040100 4063900 3976100 2661 824 2842 5947;5948 4843;4844 4844 975;976 2 VHSEAISPAPEEK IVHAVGERVHSEAISP ISPAPEEKAVTLRSLR R V H E K A 2 0 0 0 0 0 3 0 1 1 0 1 0 0 2 2 0 0 0 1 0 0 13 0 1392.6885 Q9BY89 Q9BY89 743 755 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.01698 48.608 By MS/MS By matching 1 1 880650 559920 320730 2662 1380 2843 5949;5950 4845 4845 1 VHVQFFDDSPTR REKGKSVRVHVQFFDD FFDDSPTRGWVSKRLL R V H T R G 0 1 0 2 0 1 0 0 1 0 0 0 0 2 1 1 1 0 0 2 0 0 12 0 1446.6892 U3KQ72;C9JH55;C9J8Y8;C9J7Y7;F8WAX8;A0A087WWJ1;P52701 U3KQ72 30 41 MSH6 DNA mismatch repair protein Msh6 yes no 2 7.9851E-09 114.7 By MS/MS By MS/MS 1 1 7112000 3900600 3211400 2663 43 2844 5951;5952 4846;4847 4846 50 2 VIAVYDLGGGTFDISILEIQK GLDKSEDKVIAVYDLG ISILEIQKGVFEVKST K V I Q K G 1 0 0 2 0 1 1 3 0 4 2 1 0 1 0 1 1 0 1 2 0 0 21 0 2250.2148 P38646 P38646 239 259 HSPA9 Stress-70 protein, mitochondrial yes yes 2 1.0125E-15 96.371 By matching By MS/MS 1 1 6283300 3339800 2943400 2664 954 2845 5953;5954 4848 4848 1 VIEDDPEAVYTTTGGK VSDFGLSRVIEDDPEA VYTTTGGKIPVRWTAP R V I G K I 1 0 0 2 0 0 2 2 0 1 0 1 0 0 1 0 3 0 1 2 0 0 16 0 1693.8047 Q15375 Q15375 782 797 EPHA7 Ephrin type-A receptor 7 yes yes 2 0.0030776 73.273 By MS/MS 1 0 0 0 2665 1123 2846 5955 4849 4849 2457 1 VIEDNEYTAR IADFGLARVIEDNEYT EDNEYTAREGAKFPIK R V I A R E 1 1 1 1 0 0 2 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 10 0 1208.5673 P07948;H0Y3C5;J3KPD6;P08631 P07948 391 400 LYN;HCK Tyrosine-protein kinase Lyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase HCK yes no 2 9.9442E-05 85.67 By MS/MS By MS/MS 2 1 5986100 4097100 1888900 2666 869 2847 5956;5957;5958 4850;4851;4852 4851 2101;2393 2 VIEVSHWGNIAVEENVDLK LTITSMTRVIEVSHWG VEENVDLKHTGAVLKG R V I L K H 1 0 2 1 0 0 3 1 1 2 1 1 0 0 0 1 0 1 0 4 0 0 19 0 2150.1008 B7Z4L4;P04843 B7Z4L4 61 79 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 3 0.0051417 45.608 By MS/MS 1 718480 718480 0 2667 287 2848 5959 4853 4853 1 VIGGDDLSTLTGK DQSTGDIKVIGGDDLS DLSTLTGKNVLIVEDI K V I G K N 0 0 0 2 0 0 0 3 0 1 2 1 0 0 0 1 2 0 0 1 0 0 13 0 1274.6718 P00492 P00492 116 128 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.0049498 70.1 By MS/MS By matching 1 1 675790 333250 342550 2668 831 2849 5960;5961 4854 4854 1 VIGSGCNLDSAR LSGLPKHRVIGSGCNL GCNLDSARFRYLMAEK R V I A R F 1 1 1 1 1 0 0 2 0 1 1 0 0 0 0 2 0 0 0 1 0 0 12 0 1247.5928 A8MW50;P07195;A0A087WUM2;Q6ZMR3;P00338 P00338 159 170 LDHB;LDHAL6A;LDHA L-lactate dehydrogenase;L-lactate dehydrogenase B chain;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase A chain no no 2 1.4643E-08 109.79 By MS/MS By MS/MS 1 1 3022200 1891900 1130300 2669 243;828 2850 5962;5963 4855;4856 4855 2 VIHLQFNNIASITDDTFCK LNLPESLRVIHLQFNN ITDDTFCKANDTSYIR R V I C K A 1 0 2 2 1 1 0 0 1 3 1 1 0 2 0 1 2 0 0 1 0 0 19 0 2235.0994 P20774 P20774 238 256 OGN Mimecan yes yes 3 2.6356E-09 91.475 By MS/MS By MS/MS 2 2 6826200 4188200 2637900 2670 920 2851;2852 5964;5965;5966;5967 4857;4858;4859 4857 12 3 VIKDEALSDGDDLR TVKSENLKVIKDEALS LSDGDDLRDFPSDLKK K V I L R D 1 1 0 4 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 1 0 0 14 1 1544.7682 E7EUB5;Q01831 E7EUB5 81 94 XPC DNA repair protein complementing XP-C cells yes no 2 0.00025617 84.759 By MS/MS By MS/MS 1 1 2944200 1382200 1562100 2671 424 2853 5968;5969 4860;4861 4860 490 2 VILASPETSSAK PDGAGTGKVILASPET SPETSSAKQLIFTTSD K V I A K Q 2 0 0 0 0 0 1 0 0 1 1 1 0 0 1 3 1 0 0 1 0 0 12 0 1201.6554 C9JKS0;P49116 C9JKS0 83 94 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.0096671 55.452 By MS/MS By matching 1 1 1171600 543600 627970 2672 334 2854 5970;5971 4862 4862 398 1 VIQYLAYVASSHK GKTENTKKVIQYLAYV AYVASSHKSKKDQGEL K V I H K S 2 0 0 0 0 1 0 0 1 1 1 1 0 0 0 2 0 0 2 2 0 0 13 0 1477.7929 P35579;Q5BKV1 P35579 187 199 MYH9 Myosin-9 yes no 3 0.0093433 45.115 By MS/MS By MS/MS 1 1 743310 514900 228420 2673 950 2855 5972;5973 4863;4864 4864 2 VISGTTLGYLSPK EMEASRHKVISGTTLG TLGYLSPKDMNQPSSS K V I P K D 0 0 0 0 0 0 0 2 0 1 2 1 0 0 1 2 2 0 1 1 0 0 13 0 1334.7446 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 43 55 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 2 0.0042835 63.16 By MS/MS By matching 1 1 1775300 1043000 732350 2674 129 2856 5974;5975 4865 4865 162 1 VIYSQPSAR KKGTSSKKVIYSQPSA IYSQPSARSEGEFKQT K V I A R S 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 2 0 0 1 1 0 0 9 0 1019.54 A0A087WY82;Q9Y624 A0A087WY82 258 266 F11R Junctional adhesion molecule A yes no 2 0.0076332 77.732 By MS/MS By matching 1 1 1392800 686600 706200 2675 56 2857 5976;5977 4866 4866 2262 1 VKAQTPPGPSLSGSKSPCPQEK GSISPYPKVKAQTPPG KSPCPQEKSKDSLVQS K V K E K S 1 0 0 0 1 2 1 2 0 0 1 3 0 0 5 4 1 0 0 1 0 0 22 2 2279.158 Q9UQ35 Q9UQ35 999 1020 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0016487 50.493 By MS/MS 1 2798300 2798300 0 2676 1487 2858 5978 4867 4867 1800;1801;2232 1 VKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEK LLPLEKNRVKLDDDSD PCVVVEEKKPQLTQEE R V K E K K 4 0 2 6 1 1 6 1 0 0 1 3 0 0 3 6 1 0 0 5 0 0 40 2 4246.8819 Q12872 Q12872 598 637 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 4 1.0681E-06 45.47 By MS/MS By matching 1 1 8796600 4956500 3840200 2677 1068 2859 5979;5980 4868 4868 1221 1 VKTLMEFITSR ISVEQDGKVKTLMEFI LMEFITSRKRGPLWNH K V K S R K 0 1 0 0 0 0 1 0 0 1 1 1 1 1 0 1 2 0 0 1 0 0 11 1 1323.7221 H0Y9X0;O94915 H0Y9X0 620 630 FRYL Protein furry homolog-like yes no 2 0.0067595 56.956 By MS/MS 1 0 0 0 2678 604 2860 5981 4869 4869 722;2039;2040 1 VLAETPDSFEK EVAESPLRVLAETPDS ETPDSFEKHIRSILQR R V L E K H 1 0 0 1 0 0 2 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 11 0 1234.6081 J3KMX1;Q99567 J3KMX1 460 470 NUP88 Nuclear pore complex protein Nup88 yes no 2 0.015533 71.241 By MS/MS By matching 1 1 910350 440640 469710 2679 698 2861 5982;5983 4870 4870 1 VLAPILPDNFSTPTGSR PDSPWRERVLAPILPD FSTPTGSRTDSQSVRH R V L S R T 1 1 1 1 0 0 0 1 0 1 2 0 0 1 3 2 2 0 0 1 0 0 17 0 1783.9468 Q9NQS7 Q9NQS7 281 297 INCENP Inner centromere protein yes yes 2 0.011762 46.796 By matching By MS/MS 1 1 629240 403460 225780 2680 1415 2862 5984;5985 4871 4871 1711 1 VLCRSQGTLSDLLRNPK PQAIFAQRVLCRSQGT SDLLRNPKPWSKLKSG R V L P K P 0 2 1 1 1 1 0 1 0 0 4 1 0 0 1 2 1 0 0 1 0 0 17 2 1956.0575 O95948;U3KQR8;Q9UBC0 O95948 360 376 ONECUT2;ONECUT1 One cut domain family member 2;Hepatocyte nuclear factor 6 yes no 2 0.017488 47.991 By MS/MS 1 0 0 0 2681 827 2863 5986 4872 4872 1 VLDSSYGITK SEKELNFRVLDSSYGI DSSYGITKSLENIYSE R V L T K S 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 2 1 0 1 1 0 0 10 0 1081.5655 Q68D51 Q68D51 180 189 DENND2C DENN domain-containing protein 2C yes yes 2 0.00018023 96.034 By matching By MS/MS 1 1 718070 352350 365720 2682 1183 2864 5987;5988 4873 4873 1391 1 VLDTSSLTQSAPASPTNK TVNARPQRVLDTSSLT APASPTNKGVHIHQAG R V L N K G 2 0 1 1 0 1 0 0 0 0 2 1 0 0 2 4 3 0 0 1 0 0 18 0 1815.9214 Q8N122;I3L436 Q8N122 850 867 RPTOR Regulatory-associated protein of mTOR yes no 2 0.0098022 48.14 By MS/MS By matching 1 1 13354000 7978900 5374900 2683 1248 2865 5989;5990 4874 4874 1474 1 VLEDDPEAAYTTR VSDFGLSRVLEDDPEA PEAAYTTRGGKIPIRW R V L T R G 2 1 0 2 0 0 2 0 0 0 1 0 0 0 1 0 2 0 1 1 0 0 13 0 1478.6889 F8W9W0;C9JXA2;E9PG71;F8VP57;B7ZKW7;B7ZKJ3;P29320;P54764;P54756 F8W9W0 661 673 EPHA5;EPHA3;EPHA4 Receptor protein-tyrosine kinase;Ephrin type-A receptor 3;Ephrin type-A receptor 4;Ephrin type-A receptor 5 yes no 2 0.00049455 96.015 By MS/MS By MS/MS 1 1 16677000 8319200 8357800 2684 295 2866 5991;5992 4875;4876 4876 1956;1957;2306 2 VLGAFSDGLAHLDNLK KVKAHGKKVLGAFSDG LAHLDNLKGTFATLS_ K V L L K G 2 0 1 2 0 0 0 2 1 0 4 1 0 1 0 1 0 0 0 1 0 0 16 0 1668.8835 F8W6P5;E9PEW8;E9PFT6;P68871;P02042 F8W6P5 68 83 HBB;HBD Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta yes no 3 0.0013898 55.213 By MS/MS By matching 1 1 807470 578710 228760 + 2685 439 2867 5993;5994 4877 4877 1 VLGSEGEEEDEALSPAK RPGRKAARVLGSEGEE DEALSPAKGQKPALDC R V L A K G 2 0 0 1 0 0 5 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 17 0 1758.816 M0R0Q7;P18858;M0QY71;M0R1G7;B4E135;F5GZ28 M0R0Q7 63 79 LIG1 DNA ligase;DNA ligase 1 yes no 2 0.0024845 58.674 By MS/MS By MS/MS 1 1 6312900 2751900 3561000 2686 748 2868 5995;5996 4878;4879 4878 867 2 VLQATVVAVGSGSK LPEKSQGKVLQATVVA VAVGSGSKGKGGEIQP K V L S K G 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 2 1 0 0 4 0 0 14 0 1314.7507 B8ZZL8;S4R3N1;P61604 B8ZZL8 41 54 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial yes no 2 0.0028058 76.655 By MS/MS By matching 1 1 841440 526360 315080 2687 300 2869 5997;5998 4880 4880 1 VLSPPHIK SSSATKQKVLSPPHIK VLSPPHIKADFNLADF K V L I K A 0 0 0 0 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 1 0 0 8 0 889.53854 A0A0D9SG79;Q9NZ09 A0A0D9SG79 170 177 UBAP1 Ubiquitin-associated protein 1 yes no 2 0.010153 94.692 By MS/MS By MS/MS 1 1 1547900 668830 879110 2688 174 2870 5999;6000 4881;4882 4881 219 2 VLSPPKLNEVSSDANR FGQNMSERVLSPPKLN EVSSDANRENAAAESG R V L N R E 1 1 2 1 0 0 1 0 0 0 2 1 0 0 2 3 0 0 0 2 0 0 16 1 1724.9057 K7ESQ0;B7Z7F3;Q9H6Z4 K7ESQ0 50 65 RANBP3 Ran-binding protein 3 yes no 3 3.3828E-06 93.684 By MS/MS By MS/MS 1 1 2209400 1369200 840230 2689 289 2871 6001;6002 4883;4884;4885 4883 347 3 VLSSTSEEDEPGVVK KALKPIERVLSSTSEE EDEPGVVKFLKMNCRY R V L V K F 0 0 0 1 0 0 3 1 0 0 1 1 0 0 1 3 1 0 0 3 0 0 15 0 1574.7675 Q8NI08 Q8NI08 206 220 NCOA7 Nuclear receptor coactivator 7 yes yes 2 0.015085 45.614 By MS/MS By matching 1 1 848590 408930 439660 2690 1275 2872 6003;6004 4886 4886 1 VLTAKASTDL TCNSARIRVLTAKAST TAKASTDL________ R V L D L - 2 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 2 0 0 1 0 0 10 1 1017.5706 A0A087WZF1;Q93052 A0A087WZF1 581 590 LPP Lipoma-preferred partner yes no 2 0.003191 80.17 By matching By MS/MS 1 1 1096600 520340 576290 2691 60 2873 6005;6006 4887 4887 65;1906 1 VLTPELYAELR AHNNHMAKVLTPELYA PELYAELRAKSTPSGF K V L L R A 1 1 0 0 0 0 2 0 0 0 3 0 0 0 1 0 1 0 1 1 0 0 11 0 1302.7184 G3V4N7;P12277;G3V461 G3V4N7 33 43 CKB Creatine kinase B-type yes no 2 0.013737 63.076 By MS/MS By MS/MS 1 1 730320 532370 197960 2692 560 2874 6007;6008 4888;4889 4889 2 VLVVVTDGR GMRKNVPKVLVVVTDG LVVVTDGRSQDEVKKA K V L G R S 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 4 0 0 9 0 956.56548 D6RGG3;Q99715;A0A087X0A8;H0Y5N9 D6RGG3 2428 2436 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0084478 75.738 By MS/MS By matching 1 1 1241000 882500 358470 2693 379 2875 6009;6010 4890 4890 1 VMCRSSTLRWVK RIHLPAPRVMCRSSTL SSTLRWVKRRCTRFCS R V M V K R 0 2 0 0 1 0 0 0 0 0 1 1 1 0 0 2 1 1 0 2 0 0 12 2 1521.7908 Q9Y2B4 Q9Y2B4 225 236 TP53TG5 TP53-target gene 5 protein yes yes 2 0.00757 58.172 By MS/MS By matching 1 1 3019200 1483600 1535600 2694 1494 2876 6011;6012 4891 4891 1824;1825;2240 0 VMDSDEDDDY TVKFNRRKVMDSDEDD DSDEDDDY________ K V M D Y - 0 0 0 5 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 1 0 0 10 0 1202.3921 K7EQA1;O14737 K7EQA1 78 87 PDCD5 Programmed cell death protein 5 yes no 2 0.015216 64.841 By MS/MS 1 0 0 0 2695 736 2877 6013 4892 4892 856 1 VMEGTVAAQDEFYR CTRLIKPKVMEGTVAA AAQDEFYRSGWALNMK K V M Y R S 2 1 0 1 0 1 2 1 0 0 0 0 1 1 0 0 1 0 1 2 0 0 14 0 1614.7348 P41240 P41240 172 185 CSK Tyrosine-protein kinase CSK yes yes 2 0.0074927 44.639 By matching By MS/MS 1 1 2658000 1376000 1282000 2696 959 2878 6014;6015 4893 4893 167 2411 1 VMTIPYQPMPASSPVICAGGQDR LSQSPQGRVMTIPYQP ICAGGQDRCSDAAGYP R V M D R C 2 1 0 1 1 2 0 2 0 2 0 0 2 0 4 2 1 0 1 2 0 0 23 0 2474.1756 Q15365 Q15365 178 200 PCBP1 Poly(rC)-binding protein 1 yes yes 3 0.0077103 71.06 By MS/MS By matching 1 1 6791700 3941500 2850100 2697 1122 2879 6016;6017 4894 4894 204;205 1307;1308 1 VNDAEPGSPEAPQGK RRPRRRRRVNDAEPGS SPEAPQGKRRKADGED R V N G K R 2 0 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 15 0 1494.6951 Q8N8A6 Q8N8A6 76 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 2 6.8059E-05 89.466 By MS/MS By MS/MS 1 1 5679300 3379400 2299900 2698 1261 2880 6018;6019 4895;4896;4897 4897 1487 3 VNFTVDQIR ________________ NFTVDQIRAIMDKKAN M V N I R A 0 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 2 0 0 9 0 1090.5771 P13639 P13639 2 10 EEF2 Elongation factor 2 yes yes 2 0.011321 71.692 By MS/MS By matching 1 1 1006100 785680 220450 2699 896 2881 6020;6021 4898 4898 1 VNHLYSDLSDALVIFQLYEK NSLGVNPRVNHLYSDL VIFQLYEKIKVPVDWN R V N E K I 1 0 1 2 0 1 1 0 1 1 4 1 0 1 0 2 0 0 2 2 0 0 20 0 2366.2158 P13796 P13796 413 432 LCP1 Plastin-2 yes yes 3 8.7665E-09 85.737 By MS/MS By matching 1 1 3481000 2040600 1440400 2700 898 2882 6022;6023 4899 4899 1 VNLEESSGVENSPAGARPK VLDFHLNRVNLEESSG SPAGARPKRKNKKSYD R V N P K R 2 1 2 0 0 0 3 2 0 0 1 1 0 0 2 3 0 0 0 2 0 0 19 1 1939.9599 Q8WVM8 Q8WVM8 292 310 SCFD1 Sec1 family domain-containing protein 1 yes yes 2;3 0.00010305 79.416 By MS/MS By MS/MS 2 2 12919000 7050100 5869100 2701 1290 2883 6024;6025;6026;6027 4900;4901 4901 1523 2 VNNGIRDFSTSVTPK KNGQVIVKVNNGIRDF FSTSVTPKQSLCDGRW K V N P K Q 0 1 2 1 0 0 0 1 0 1 0 1 0 1 1 2 2 0 0 2 0 0 15 1 1633.8424 A0A0A0MTC7;A0A0A0MQS9;Q16363 A0A0A0MTC7 1702 1716 LAMA4 Laminin subunit alpha-4 yes no 2 0.0081288 41.621 By MS/MS 1 983560 983560 0 2702 92 2884 6028 4902 4902 113;114;1911 1 VNQIGSVTESLQACK SCNCLLLKVNQIGSVT TESLQACKLAQANGWG K V N C K L 1 0 1 0 1 2 1 1 0 1 1 1 0 0 0 2 1 0 0 2 0 0 15 0 1632.8141 P06733 P06733 344 358 ENO1 Alpha-enolase yes yes 2 0.0029042 68.069 By matching By MS/MS 1 1 1240200 876140 364080 2703 860 2885 6029;6030 4903 4903 1 VNQSALEAVTPSPSFQQR NPEETAARVNQSALEA PSPSFQQRHESLRPAA R V N Q R H 2 1 1 0 0 3 1 0 0 0 1 0 0 1 2 3 1 0 0 2 0 0 18 0 1957.9858 Q9UKG1 Q9UKG1 390 407 APPL1 DCC-interacting protein 13-alpha yes yes 2 0.012156 46.121 By matching By MS/MS 1 1 1479600 840060 639570 2704 1465 2886 6031;6032 4904 4904 1774 1 VNSGDTEVGSSLLR VKAIPRRRVNSGDTEV EVGSSLLRHPSPELSR R V N L R H 0 1 1 1 0 0 1 2 0 0 2 0 0 0 0 3 1 0 0 2 0 0 14 0 1432.7158 O75592 O75592 3465 3478 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 0.00010165 96.247 By MS/MS By MS/MS 1 1 4176400 2471300 1705100 2705 800 2887 6033;6034 4905;4906 4905 942 2 VPAKLSPMK SHTKSLPKVPAKLSPM PAKLSPMKQAQLRNFL K V P M K Q 1 0 0 0 0 0 0 0 0 0 1 2 1 0 2 1 0 0 0 1 0 0 9 1 969.56812 P35658;A0A0A0MSW3 P35658 935 943 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.0044309 113.67 By matching By MS/MS 1 1 2911300 1505600 1405700 2706 952 2888 6035;6036 4907 4907 1072 1 VPPAPVPCPPPSPGPSAVPSSPK PSEKVEVKVPPAPVPC SAVPSSPKSVATEERA K V P P K S 2 0 0 0 1 0 0 1 0 0 0 1 0 0 11 4 0 0 0 3 0 0 23 0 2218.1456 O95817 O95817 366 388 BAG3 BAG family molecular chaperone regulator 3 yes yes 3 0.005028 45.941 By matching By MS/MS 1 1 2119600 1254400 865180 2707 825 2889 6037;6038 4908 4908 977;978 1 VPSAPGQESPIPDPK PPEMVGQRVPSAPGQE ESPIPDPKLMPHMKNE R V P P K L 1 0 0 1 0 1 1 1 0 1 0 1 0 0 5 2 0 0 0 1 0 0 15 0 1517.7726 E9PGC8;P78559 E9PGC8 2048 2062 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.01141 48.405 By MS/MS By matching 1 1 1472300 877750 594520 2708 446 2890 6039;6040 4909 4909 522 1 VPSVESLFR FAQKLQLRVPSVESLF PSVESLFRSPIKESLF R V P F R S 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 2 0 0 0 2 0 0 9 0 1032.5604 E7EVX2;Q86W71;Q13439 E7EVX2 91 99 GOLGA4 Golgin subfamily A member 4 yes no 2 0.017417 58.699 By matching By MS/MS 1 1 4937700 2542200 2395600 2709 428 2891 6041;6042 4910 4910 1 VPTAIHQLYLDSNK ILRKMPPRVPTAIHQL QLYLDSNKIETIPNGY R V P N K I 1 0 1 1 0 1 0 0 1 1 2 1 0 0 1 1 1 0 1 1 0 0 14 0 1597.8464 P51888 P51888 240 253 PRELP Prolargin yes yes 3 0.014788 39.961 By MS/MS By matching 1 1 1134200 919110 215040 2710 997 2892 6043;6044 4911 4911 1 VPVDPATYGQFYGGDSYIILYNYR WRIEGSNKVPVDPATY YIILYNYRHGGRQGQI K V P Y R H 1 1 1 2 0 1 0 3 0 2 1 0 0 1 2 1 1 0 5 2 0 0 24 0 2770.3279 A0A0A0MS51;A0A0A0MT01;CON__Q3SX14;P06396 A0A0A0MS51 424 447 GSN Gelsolin yes no 2;3 3.2108E-25 80.277 By MS/MS 2 10709000 0 10709000 + 2711 113 2893 6045;6046 4912;4913 4912 2 VPVLISPTLK LPTTHNHKVPVLISPT VLISPTLKHTPADVQL K V P L K H 0 0 0 0 0 0 0 0 0 1 2 1 0 0 2 1 1 0 0 2 0 0 10 0 1065.6798 P42684 P42684 931 940 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0034237 71.085 By MS/MS By matching 1 1 3966000 2240400 1725600 2712 961 2894 6047;6048 4914 4914 1082 1 VQAGPGSPR GRGAAVSRVQAGPGSP QAGPGSPRRARGRQQV R V Q P R R 1 1 0 0 0 1 0 2 0 0 0 0 0 0 2 1 0 0 0 1 0 0 9 0 867.45626 I3L4F6;I3L0U5;Q6PK04 I3L4F6 12 20 CCDC137 Coiled-coil domain-containing protein 137 yes no 2 0.00066784 85.533 By MS/MS 2 1051800 0 1051800 2713 688 2895 6049;6050 4915;4916 4916 814 2 VQAYEEPSVASSPNGK LTQDWESRVQAYEEPS VASSPNGKESDLRRSE R V Q G K E 2 0 1 0 0 1 2 1 0 0 0 1 0 0 2 3 0 0 1 2 0 0 16 0 1661.7897 Q99575 Q99575 719 734 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 2 6.4996E-19 115.68 By MS/MS By MS/MS 2 2 13810000 8250200 5559800 2714 1357 2896;2897 6051;6052;6053;6054 4917;4918;4919 4917 17 1615;1616;1617 3 VQAYEEPSVASSPNGKESDLR LTQDWESRVQAYEEPS NGKESDLRRSEVPCAP R V Q L R R 2 1 1 1 0 1 3 1 0 0 1 1 0 0 2 4 0 0 1 2 0 0 21 1 2262.0764 Q99575 Q99575 719 739 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 3 0.00089646 72.935 By MS/MS By matching 1 1 7519600 4833000 2686600 2715 1357 2898 6055;6056 4920 4920 17 1615;1616;1617 1 VQEHEDSGDSEVENEAK LRRLRGPRVQEHEDSG SEVENEAKGNFPPQKK R V Q A K G 1 0 1 2 0 1 5 1 1 0 0 1 0 0 0 2 0 0 0 2 0 0 17 0 1900.7923 Q9Y5J1 Q9Y5J1 115 131 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 3 0.00023762 80.41 By MS/MS By MS/MS 1 1 2666100 1610600 1055500 2716 1512 2899 6057;6058 4921;4922 4922 1855 2 VQEKPDSPGGSTQIQR SKPCGSPRVQEKPDSP GGSTQIQRYLDAERLA R V Q Q R Y 0 1 0 1 0 3 1 2 0 1 0 1 0 0 2 2 1 0 0 1 0 0 16 1 1725.8646 M0R300;M0R0P8;Q13459 M0R300 1284 1299 MYO9B Unconventional myosin-IXb yes no 3 0.0011842 61.181 By MS/MS By matching 1 1 3501900 2335500 1166400 2717 747 2900 6059;6060 4923 4923 864 1 VQGSPLKK LSSQERMKVQGSPLKK VQGSPLKKLFTSTGLK K V Q K K L 0 0 0 0 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 8 1 855.5178 Q02952 Q02952 511 518 AKAP12 A-kinase anchor protein 12 yes yes 2 0.017611 96.665 By matching By MS/MS 1 1 2113200 1322700 790530 2718 1045 2901 6061;6062 4924 4924 1 VQISPDSGGLPER IQQDSGCKVQISPDSG DSGGLPERSVSLTGAP K V Q E R S 0 1 0 1 0 1 1 2 0 1 1 0 0 0 2 2 0 0 0 1 0 0 13 0 1353.6888 M0QXW7;M0QYH3;A0A087WTP3;Q92945 M0QXW7 34 46 KHSRP Far upstream element-binding protein 2 yes no 2 0.010331 53.136 By MS/MS By matching 1 1 10782000 6114200 4667400 2719 18 2902 6063;6064 4925 4925 15 1 VQMQVRNSK KQMEKFRKVQMQVRNS QMQVRNSKASFDKLKM K V Q S K A 0 1 1 0 0 2 0 0 0 0 0 1 1 0 0 1 0 0 0 2 0 0 9 1 1088.5761 F8WBQ1;Q8NDH6 F8WBQ1 187 195 ICA1L Islet cell autoantigen 1-like protein yes no 2 0.0064088 63.624 By MS/MS 1 0 0 0 2720 537 2903 6065 4926 4926 630 1 VQMTSPSSTGSPMFK SSQALTNKVQMTSPSS STGSPMFKFSSPIVKS K V Q F K F 0 0 0 0 0 1 0 1 0 0 0 1 2 1 2 4 2 0 0 1 0 0 15 0 1583.7324 P49790 P49790 512 526 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.0019842 60.949 By MS/MS By MS/MS 2 2 3804300 1976200 1828100 2721 980 2904;2905 6066;6067;6068;6069 4927;4928 4928 173;174 1123;1124 1 VQSPEPPAPER RRHQERLRVQSPEPPA PEPPAPERALSPAELR R V Q E R A 1 1 0 0 0 1 2 0 0 0 0 0 0 0 4 1 0 0 0 1 0 0 11 0 1205.6041 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1392 1402 SCRIB Protein scribble homolog yes no 2 0.0011959 84.297 By MS/MS By matching 1 1 2463300 1248700 1214700 2722 178 2906 6070;6071 4929 4929 229 1 VQTMPTAIFGPLVSNR V Q N R 1 1 1 0 0 1 0 1 0 1 1 0 1 1 2 1 2 0 0 2 0 0 16 0 1729.9185 REV__Q92506 yes yes 3 0.010111 40.237 By matching By MS/MS 1 1 2079500 482960 1596600 + 2723 1539 2907 6072;6073 4930 4930 1883 1 VQTTPSKPGGDR TPGKSSSKVQTTPSKP PSKPGGDRYIPHRSAA K V Q D R Y 0 1 0 1 0 1 0 2 0 0 0 1 0 0 2 1 2 0 0 1 0 0 12 1 1241.6364 Q12834 Q12834 67 78 CDC20 Cell division cycle protein 20 homolog yes yes 2 3.4468E-08 115.34 By MS/MS By MS/MS 1 1 2537900 1576900 960960 2724 1067 2908 6074;6075 4931;4932 4931 2146 2 VRAENKIGTGPPTESK EGNEYIFRVRAENKIG TGPPTESKPVIAKTKY R V R S K P 1 1 1 0 0 0 2 2 0 1 0 2 0 0 2 1 2 0 0 1 0 0 16 2 1682.8951 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42 A0A0A0MRA3 12065 12080 TTN Titin yes no 2 0.015757 44.045 By MS/MS By matching 1 1 3342500 1602400 1740100 2725 97 2909 6076;6077 4933 4933 1 VSAGEPGSHPSPAPR CRRGKEPKVSAGEPGS SHPSPAPRRSPAGNKQ K V S P R R 2 1 0 0 0 0 1 2 1 0 0 0 0 0 4 3 0 0 0 1 0 0 15 0 1444.7059 A0A1B0GV68;C9JME2;Q9Y4F1 A0A1B0GV68 417 431 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 2 0.0092564 50.04 By MS/MS By matching 1 1 3717300 2183900 1533400 2726 215 2910 6078;6079 4934 4934 270 1 VSCHDSDDDIMR IGLGIKNRVSCHDSDD DSDDDIMRNDREYDSG R V S M R N 0 1 0 4 1 0 0 0 1 1 0 0 1 0 0 2 0 0 0 1 0 0 12 0 1448.566 Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4 360 371 NOL8 Nucleolar protein 8 yes no 2 0.0054152 65.295 By matching By MS/MS 1 1 1288500 506700 781770 2727 1213 2911 6080;6081 4935 4935 1421 1 VSDQNSPVLPK AYMLFYQRVSDQNSPV QNSPVLPKKSRVSVVR R V S P K K 0 0 1 1 0 1 0 0 0 0 1 1 0 0 2 2 0 0 0 2 0 0 11 0 1182.6245 Q9UPU5 Q9UPU5 2042 2052 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 5.5951E-07 135.94 By MS/MS By MS/MS 1 1 25785000 14555000 11230000 2728 1483 2912 6082;6083 4936;4937 4937 1796 2 VSGAGFSPSSK FGIIGNDRVSGAGFSP AGFSPSSKMEGGHFVP R V S S K M 1 0 0 0 0 0 0 2 0 0 0 1 0 1 1 4 0 0 0 1 0 0 11 0 1022.5033 Q9C0C2 Q9C0C2 1132 1142 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0022111 73.881 By MS/MS 1 930080 0 930080 2729 1385 2913 6084 4938 4938 1662 1 VSGRTSPPLLDR VPLSAYERVSGRTSPP TSPPLLDRARSRTPPS R V S D R A 0 2 0 1 0 0 0 1 0 0 2 0 0 0 2 2 1 0 0 1 0 0 12 1 1296.715 Q9UQ35 Q9UQ35 2393 2404 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0044491 72.434 By MS/MS By MS/MS 1 1 14196000 7645900 6549700 2730 1487 2914 6085;6086 4939;4940 4940 1816 2 VSGSPSSGFR ETRSSFSRVSGSPSSG GSPSSGFRSQSWSRGS R V S F R S 0 1 0 0 0 0 0 2 0 0 0 0 0 1 1 4 0 0 0 1 0 0 10 0 979.47231 P07197;E7ESP9;E7EMV2 P07197 27 36 NEFM Neurofilament medium polypeptide yes no 2 0.019717 53.567 By MS/MS 1 398140 398140 0 2731 862 2915 6087 4941 4941 1 VSLEPHQGPGTPESK TTRQQRKRVSLEPHQG GPGTPESKKATSCFPR R V S S K K 0 0 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 15 0 1561.7736 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1974 1988 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.006661 76.586 By MS/MS By MS/MS 1 1 9543400 4875100 4668300 2732 55 2916 6088;6089 4942;4943 4942 1904 2 VSNLQVSPK DLEITDSKVSNLQVSP SNLQVSPKSEDISKFD K V S P K S 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 2 0 0 0 2 0 0 9 0 970.54475 A0A0C4DGF9;O00443 A0A0C4DGF9 253 261 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes no 2 0.00011713 107.03 By MS/MS By MS/MS 1 1 2786300 1502400 1283900 2733 154 2917 6090;6091 4944;4945 4945 195 2 VSSQSFSEIER KKGLGAQKVSSQSFSE QSFSEIERQAQVAEKL K V S E R Q 0 1 0 0 0 1 2 0 0 1 0 0 0 1 0 4 0 0 0 1 0 0 11 0 1267.6044 E9PQP3;E9PIY6;A0A0D9SF70;G5E9L0;Q8N6H7 E9PQP3 100 110 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 2 0.005113 67.952 By MS/MS By MS/MS 1 1 1205500 673780 531690 2734 170 2918 6092;6093 4946;4947 4946 215 2 VTEGTIREEQEYEEEVEEEPRPAAK GEYRPHHRVTEGTIRE EEPRPAAKVVEREEAV R V T A K V 2 2 0 0 0 1 10 1 0 1 0 1 0 0 2 0 2 0 1 2 0 0 25 2 2946.3731 O43491;H0Y5B0;E9PK52;E9PHY5;E9PMV8;Q6R5J7 O43491 762 786 EPB41L2 Band 4.1-like protein 2 yes no 4 0.00024851 53.998 By MS/MS 1 4269200 4269200 0 2735 783 2919 6094 4948 4948 2387 1 VTFNGLNQMIVIELGTNPLK NEITKVRKVTFNGLNQ ELGTNPLKSSGIENGA K V T L K S 0 0 3 0 0 1 1 2 0 2 3 1 1 1 1 0 2 0 0 2 0 0 20 0 2200.1926 P07585 P07585 168 187 DCN Decorin yes yes 2 0.013673 48.823 By matching By MS/MS 1 1 4162200 2401900 1760300 2736 865 2920 6095;6096 4949 4949 1 VTLTSEEEAR NGISDLVKVTLTSEEE LTSEEEARLKKSADTL K V T A R L 1 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 10 0 1133.5564 P00338 P00338 306 315 LDHA L-lactate dehydrogenase A chain yes yes 2 0.00032069 96.034 By MS/MS By matching 1 1 1721600 1268700 452910 2737 828 2921 6097;6098 4950 4950 1 VTNDISPESSPGVGR FGVESDKRVTNDISPE ESSPGVGRRRTKTPHT R V T G R R 0 1 1 1 0 0 1 2 0 1 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1513.7372 E5RGQ4;E9PGW9;E7EV93;A6NNN6;E7ETA6;Q15154 E5RGQ4 60 74 PCM1 Pericentriolar material 1 protein yes no 2 0.0013236 76.341 By MS/MS By matching 1 1 8149400 3928900 4220400 2738 236 2922 6099;6100 4951 4951 289 1 VTPPEGYEVVTVFPK CEKHARERVTPPEGYE EVVTVFPK________ R V T P K - 0 0 0 0 0 0 2 1 0 0 0 1 0 1 3 0 2 0 1 4 0 0 15 0 1660.8712 O00151 O00151 315 329 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.011824 51.979 By MS/MS By matching 1 1 5160400 2976400 2184000 2739 749 2923 6101;6102 4952 4952 2375 1 VTQHESDNENEIQIQNK DSLEVERRVTQHESDN NEIQIQNKLKKDFPKQ R V T N K L 0 0 3 1 0 3 3 0 1 2 0 1 0 0 0 1 1 0 0 1 0 0 17 0 2024.9399 Q5VZL5 Q5VZL5 117 133 ZMYM4 Zinc finger MYM-type protein 4 yes yes 3 2.6825E-11 102.67 By MS/MS By MS/MS 1 1 15865000 9138700 6726000 2740 1180 2924 6103;6104 4953;4954 4954 1389 2 VTSGGVSESPSGFSK KKGAKRPRVTSGGVSE ESPSGFSKHIQSNLDF R V T S K H 0 0 0 0 0 0 1 3 0 0 0 1 0 1 1 5 1 0 0 2 0 0 15 0 1424.6783 J3KN87;E7EPP6;O14757 J3KN87 278 292 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 3.7545E-27 144.88 By MS/MS By MS/MS 1 1 11923000 6444900 5477800 2741 407 2925 6105;6106 4955;4956 4956 460 2 VTSLTACLVDQSLR LQVSRGQKVTSLTACL CLVDQSLRLDCRHENT K V T L R L 1 1 0 1 1 1 0 0 0 0 3 0 0 0 0 2 2 0 0 2 0 0 14 0 1561.8134 E9PIM6;E9PNQ8;P04216 E9PIM6 22 35 THY1 Thy-1 membrane glycoprotein yes no 2 0.0068823 59.198 By MS/MS By matching 1 1 535140 361060 174080 2742 451 2926 6107;6108 4957;4958 4958 2 VTSSMSSPSMQPK ETLPANFRVTSSMSSP SSPSMQPKKMQMDGNV R V T P K K 0 0 0 0 0 1 0 0 0 0 0 1 2 0 2 5 1 0 0 1 0 0 13 0 1365.6268 Q13136 Q13136 1166 1178 PPFIA1 Liprin-alpha-1 yes yes 2 0.013712 50.353 By MS/MS By matching 1 1 922160 481870 440300 2743 1078 2927 6109;6110 4959 4959 195 1 VTSSVPLPSGSTSSPGR VTRMRCWRVTSSVPLP GSTSSPGRGRGEVRLE R V T G R G 0 1 0 0 0 0 0 2 0 0 1 0 0 0 3 6 2 0 0 2 0 0 17 0 1614.8213 Q15036 Q15036 323 339 SNX17 Sorting nexin-17 yes yes 2 0.0012445 76.391 By matching By MS/MS 1 1 5996400 3257300 2739000 2744 1115 2928 6111;6112 4960;4961 4961 1302;1303 2 VTVSRASSSR LSPSPSSRVTVSRASS VSRASSSRSVRTTRGK R V T S R S 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 2 0 0 10 1 1048.5625 P20700 P20700 398 407 LMNB1 Lamin-B1 yes yes 2 1.9412E-05 103.43 By matching By MS/MS 1 1 12686000 5604400 7081900 2745 919 2929 6113;6114 4962 4962 1042 1 VVCVGMNYVDHCKEQNVPVPK APVTRPDKVVCVGMNY EQNVPVPKEPIIFSKF K V V P K E 0 0 2 1 2 1 1 1 1 0 0 2 1 0 2 0 0 0 1 6 0 0 21 1 2471.176 Q96GK7;Q6P2I3 Q96GK7 108 128 FAHD2A;FAHD2B Fumarylacetoacetate hydrolase domain-containing protein 2A;Fumarylacetoacetate hydrolase domain-containing protein 2B yes no 2 0.0053055 42.789 By matching By MS/MS 1 1 3197300 1885600 1311700 2746 1194 2930 6115;6116 4963 4963 2469 1 VVDYSQFQESDDADEDYGR SRPVRNRKVVDYSQFQ DADEDYGRDSGPPTKK K V V G R D 1 1 0 5 0 2 2 1 0 0 0 0 0 1 0 2 0 0 2 2 0 0 19 0 2236.9033 Q9H1E3 Q9H1E3 10 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 4.6017E-38 139.04 By MS/MS By MS/MS 2 4 603330000 247810000 355520000 2747 1393 2931;2932 6117;6118;6119;6120;6121;6122 4964;4965;4966;4967;4968;4969;4970;4971;4972 4968 1677 9 VVDYSQFQESDDADEDYGRDSGPPTKK SRPVRNRKVVDYSQFQ DSGPPTKKIRSSPREA K V V K K I 1 1 0 6 0 2 2 2 0 0 0 2 0 1 2 3 1 0 2 2 0 0 27 2 3047.3268 Q9H1E3 Q9H1E3 10 36 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 4 0.0014302 47.728 By MS/MS By MS/MS 1 1 89626000 52572000 37054000 2748 1393 2933 6123;6124 4973;4974 4974 1677 2 VVEAVNSDSDSEFGIPK KRAPKQKKVVEAVNSD DSEFGIPKKTTTPKGK K V V P K K 1 0 1 2 0 0 2 1 0 1 0 1 0 1 1 3 0 0 0 3 0 0 17 0 1791.8527 Q02880 Q02880 1516 1532 TOP2B DNA topoisomerase 2-beta yes yes 2 0.0022643 57.019 By MS/MS By MS/MS 2 1 5568700 3592200 1976500 2749 1044 2934;2935 6125;6126;6127 4975;4976;4977 4975 1190;1191;1192 3 VVIGMDVAASEFFR GKAGYTDKVVIGMDVA VAASEFFRSGKYDLDF K V V F R S 2 1 0 1 0 0 1 1 0 1 0 0 1 2 0 1 0 0 0 3 0 0 14 0 1539.7755 P06733 P06733 240 253 ENO1 Alpha-enolase yes yes 2 0.0076397 53.569 By MS/MS By MS/MS 1 1 833590 516370 317230 2750 860 2936 6128;6129 4978;4979 4979 136 2 VVIHFTDGADGDLADLHR QSSPDSVKVVIHFTDG GDLADLHRASENLRQE K V V H R A 2 1 0 4 0 0 0 2 2 1 2 0 0 1 0 0 1 0 0 2 0 0 18 0 1949.9595 E7ENL6;P12111 E7ENL6 1340 1357 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.0020308 53.278 By MS/MS 1 414300 414300 0 2751 403 2937 6130 4980 4980 1 VVLIGGKPDR CCPHSTDRVVLIGGKP LIGGKPDRVVECIKII R V V D R V 0 1 0 1 0 0 0 2 0 1 1 1 0 0 1 0 0 0 0 2 0 0 10 1 1052.6342 P61978;Q5T6W2 P61978 192 201 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 6.8339E-05 81.525 By MS/MS 1 0 0 0 2752 1018 2938 6131 4981 4981 1 VVNGAAASQPPSKR KAKAGELKVVNGAAAS ASQPPSKRKRRWDQTA K V V K R K 3 1 1 0 0 1 0 1 0 0 0 1 0 0 2 2 0 0 0 2 0 0 14 1 1380.7474 O75533 O75533 183 196 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.001866 81.703 By matching By MS/MS 2 2 1944200 988080 956130 2753 799 2939;2940 6132;6133;6134;6135 4982;4983 4982 940 2 VVNTDHGSPEQLQIPVTDSGR PSGSQRARVVNTDHGS IPVTDSGRHILEDSCA R V V G R H 0 1 1 2 0 2 1 2 1 1 1 0 0 0 2 2 2 0 0 3 0 0 21 0 2248.1084 Q6IQ49 Q6IQ49 271 291 SDE2 Protein SDE2 homolog yes yes 3 0.0011572 61.087 By MS/MS By matching 1 1 12949000 8300100 4648700 2754 1188 2941 6136;6137 4984 4984 1396 1 VVPEDGSPEKR KEVQSSCRVVPEDGSP EDGSPEKRCPGGVLSC R V V K R C 0 1 0 1 0 0 2 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 11 1 1211.6146 Q02040 Q02040 531 541 AKAP17A A-kinase anchor protein 17A yes yes 2 0.00014213 101.72 By MS/MS By MS/MS 3 1 4212600 2006800 2205700 2755 1042 2942 6138;6139;6140;6141 4985;4986;4987;4988 4988 1187 4 VVPSFLPVDQGGSLVGR EGAPPEDKVVPSFLPV QGGSLVGRNGVGGMAK K V V G R N 0 1 0 1 0 1 0 3 0 0 2 0 0 1 2 2 0 0 0 4 0 0 17 0 1725.9414 Q14126 Q14126 668 684 DSG2 Desmoglein-2 yes yes 2 0.004016 55.04 By MS/MS By matching 1 1 4819200 2268400 2550800 2756 1093 2943 6142;6143 4989 4989 1259 1 VVSEDFLQDVSASTK EVKEANIRVVSEDFLQ QDVSASTKSLQELFLA R V V T K S 1 0 0 2 0 1 1 0 0 0 1 1 0 1 0 3 1 0 0 3 0 0 15 0 1623.7992 P09874 P09874 453 467 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 8.2931E-05 93.345 By MS/MS By matching 1 1 1670500 853970 816540 2757 876 2944 6144;6145 4990 4990 1 VVSSTSEEEEAFTEK FTGIRPARVVSSTSEE EEEAFTEKFLKINCKY R V V E K F 1 0 0 0 0 0 5 0 0 0 0 1 0 1 0 3 2 0 0 2 0 0 15 0 1670.7523 Q8N573 Q8N573 199 213 OXR1 Oxidation resistance protein 1 yes yes 2 0.0014571 78.814 By MS/MS By MS/MS 1 1 5687900 2985100 2702900 2758 1258 2945 6146;6147 4991;4992 4991 1483;1484;2192 2 VVSVLTVLHQDWLNGK EQYNSTYRVVSVLTVL HQDWLNGKEYKCKVSN R V V G K E 0 0 1 1 0 1 0 1 1 0 3 1 0 0 0 1 1 1 0 4 0 0 16 0 1806.9992 A0A0A0MS08;P01857;P01860;P01861 A0A0A0MS08 185 200 IGHG1;IGHG3;IGHG4 Ig gamma-1 chain C region;Ig gamma-3 chain C region;Ig gamma-4 chain C region yes no 2;3 5.828E-141 187.63 By MS/MS By MS/MS 4 4 30141000 20066000 10075000 2759 112 2946;2947 6148;6149;6150;6151;6152;6153;6154;6155 4993;4994;4995;4996;4997;4998;4999 4993 0 6 VVSVLTVVHQDWLNGK EQFNSTFRVVSVLTVV HQDWLNGKEYKCKVSN R V V G K E 0 0 1 1 0 1 0 1 1 0 2 1 0 0 0 1 1 1 0 5 0 0 16 0 1792.9836 P01859 P01859 181 196 IGHG2 Ig gamma-2 chain C region yes yes 2;3 1.9466E-45 153.32 By MS/MS By MS/MS 2 2 7066600 4097200 2969400 2760 840 2948 6156;6157;6158;6159 5000;5001;5002;5003 5000 7;33 4 VVTNYNSAHDQNSNLLIEYFR RCLGIPTRVVTNYNSA NLLIEYFRNEFGEIQG R V V F R N 1 1 4 1 0 1 1 0 1 1 2 0 0 1 0 2 1 0 2 2 0 0 21 0 2496.2034 P21980 P21980 297 317 TGM2 Protein-glutamine gamma-glutamyltransferase 2 yes yes 3 0.0067175 43.12 By MS/MS By matching 1 1 1108700 755910 352760 2761 922 2949 6160;6161 5004 5004 1 VVTPLSPPTNLHLEANPDTGVLTVSWER RDAPIVNKVVTPLSPP VLTVSWERSTTPDITG K V V E R S 1 1 2 1 0 0 2 1 1 0 4 0 0 0 4 2 4 1 0 4 0 0 28 0 3041.5822 P02751 P02751 1170 1197 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 3 0.0073948 39.737 By MS/MS By matching 1 1 16481000 11422000 5059900 2762 843 2950 6162;6163 5005 5005 1 VVVSPTK AAATSAKKVVVSPTKK KVVVSPTKKVAVATPA K V V T K K 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 3 0 0 7 0 728.44324 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 70 NCL Nucleolin yes no 2 0.016849 105.1 By MS/MS By matching 1 1 11782000 7335600 4446200 2763 914 2951 6164;6165 5006 5006 1037;2114 1 VVVSPTKK AAATSAKKVVVSPTKK VVVSPTKKVAVATPAK K V V K K V 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 71 NCL Nucleolin yes no 2 0.011774 99.788 By MS/MS By matching 1 1 270380000 126180000 144200000 2764 914 2952 6166;6167 5007 5007 1037;2114 1 VWDLAQQVVLSSYR GSKDICIKVWDLAQQV QVVLSSYRAHAAQVTC K V W Y R A 1 1 0 1 0 2 0 0 0 0 2 0 0 0 0 2 0 1 1 3 0 0 14 0 1662.873 Q9BQA1;H0Y711 Q9BQA1 151 164 WDR77 Methylosome protein 50 yes no 2 0.00049867 89.189 By MS/MS 1 1690800 1690800 0 2765 1361 2953 6168 5008 5008 1 VWSPLVTEEGKR TVARSEHKVWSPLVTE LVTEEGKRHPYKMNLA K V W K R H 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 1 1 1 0 2 0 0 12 1 1399.746 O00151 O00151 88 99 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.017987 55.899 By MS/MS By matching 1 1 3443000 1979200 1463800 2766 749 2954 6169;6170 5009 5009 1 VYAPASTLVDQPYANEGTVVVTER QSLIVTERVYAPASTL GTVVVTERVIQPHGGG R V Y E R V 3 1 1 1 0 1 2 1 0 0 1 0 0 0 2 1 3 0 2 5 0 0 24 0 2578.2915 Q14126 Q14126 967 990 DSG2 Desmoglein-2 yes yes 3 0.0031109 45.913 By matching By MS/MS 1 1 4744900 2044800 2700100 2767 1093 2955 6171;6172 5010 5010 2449 1 VYEHTSRFSPK VDSEKSNKVYEHTSRF HTSRFSPKKTSSNCNG K V Y P K K 0 1 0 0 0 0 1 0 1 0 0 1 0 1 1 2 1 0 1 1 0 0 11 1 1349.6728 P46100;A0A096LNL9;A0A096LNN3;A0A096LNW1 P46100 308 318 ATRX Transcriptional regulator ATRX yes no 3 0.012976 55.899 By MS/MS By MS/MS 1 1 4994400 3339800 1654600 2768 966 2956 6173;6174 5011;5012 5011 2413 2 VYENVGLMQQQK EMREDSARVYENVGLM VGLMQQQKSFR_____ R V Y Q K S 0 0 1 0 0 3 1 1 0 0 1 1 1 0 0 0 0 0 1 2 0 0 12 0 1435.7129 Q06124 Q06124 583 594 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 2;3 0 238.73 By MS/MS By MS/MS 3 3 23957000 13008000 10949000 2769 1054 2957;2958 6175;6176;6177;6178;6179;6180 5013;5014;5015;5016;5017 5016 190 2442 5 VYSLGEENSTNNSTGQSR AKKVSGFKVYSLGEEN NNSTGQSRAVIAAAAR K V Y S R A 0 1 3 0 0 1 2 2 0 0 1 0 0 0 0 4 2 0 1 1 0 0 18 0 1941.8664 Q9ULK5 Q9ULK5 307 324 VANGL2 Vang-like protein 2 yes yes 2 0.00056536 78.964 By MS/MS By MS/MS 1 1 1550000 851200 698820 2770 1473 2959 6181;6182 5018;5019 5019 2511 2 VYTYIQSR SSCYEHQRVYTYIQSR VYTYIQSRFYRAPEVI R V Y S R F 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 2 1 0 0 8 0 1028.5291 Q92630;A0A0A0MTH5;Q9NR20 Q92630 379 386 DYRK2;DYRK4 Dual specificity tyrosine-phosphorylation-regulated kinase 2;Dual specificity tyrosine-phosphorylation-regulated kinase 4 yes no 2 0.0085393 69.423 By MS/MS 1 0 0 0 2771 1306 2960 6183 5020 5020 2481 1 WCALSHHER TDECKPVKWCALSHHE CALSHHERLKCDEWSV K W C E R L 1 1 0 0 1 0 1 0 2 0 1 0 0 0 0 1 0 1 0 0 0 0 9 0 1194.5353 P02787 P02787 363 371 TF Serotransferrin yes yes 3 0.0067245 61.161 By MS/MS By matching 1 1 1120800 825550 295260 2772 845 2961 6184;6185 5021 5021 1 WDGSEEDEDNSK KAQKSNKKWDGSEEDE EEDEDNSKKIKERSRI K W D S K K 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 2 0 1 0 0 0 0 12 0 1409.5219 A0A087WUT6;O60841 A0A087WUT6 161 172 EIF5B Eukaryotic translation initiation factor 5B yes no 2 4.7967E-07 107.65 By MS/MS By MS/MS 2 2 6092200 3143900 2948200 2773 28 2962 6186;6187;6188;6189 5022;5023;5024;5025 5025 27 4 WDQTADQTPGATPK PPSKRKRRWDQTADQT QTPGATPKKLSSWDQA R W D P K K 2 0 0 2 0 2 0 1 0 0 0 1 0 0 2 0 3 1 0 0 0 0 14 0 1514.7001 O75533 O75533 200 213 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0025645 62.799 By MS/MS By MS/MS 1 1 1868500 1071600 796900 2774 799 2963 6190;6191 5026;5027 5026 2085;2086 1 WDTGENPIYK EKEKMNAKWDTGENPI TGENPIYKSAVTTVVN K W D Y K S 0 0 1 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 0 0 0 10 0 1221.5666 P05556 P05556 775 784 ITGB1 Integrin beta-1 yes yes 2 8.2882E-11 146.23 By MS/MS By MS/MS 1 1 25799000 13285000 12515000 2775 857 2964 6192;6193 5028;5029 5029 2392 2 WFYIASAFR TLDRITGKWFYIASAF FYIASAFRNEEYNKSV K W F F R N 2 1 0 0 0 0 0 0 0 1 0 0 0 2 0 1 0 1 1 0 0 0 9 0 1159.5815 P19652;P02763 P19652 43 51 ORM2;ORM1 Alpha-1-acid glycoprotein 2;Alpha-1-acid glycoprotein 1 yes no 2 0.00091716 98.523 By MS/MS By matching 1 1 5277600 3348600 1929000 2776 844 2965 6194;6195 5030 5030 1 WHWSSGSLVSYK HDPKKNRRWHWSSGSL SGSLVSYKSWGIGAPS R W H Y K S 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 4 0 2 1 1 0 0 12 0 1435.6884 P05451;H7BZ24;P48304 P05451 111 122 REG1A;REG1B Lithostathine-1-alpha;Lithostathine-1-beta yes no 3 0.0005164 70.685 By MS/MS By MS/MS 1 1 496370 496370 0 2777 855 2966 6196;6197 5031;5032;5033 5031 3 WLDDLLASPPPSGGGAR PGPESSSRWLDDLLAS PPSGGGARRGAGAELK R W L A R R 2 1 0 2 0 0 0 3 0 0 3 0 0 0 3 2 0 1 0 0 0 0 17 0 1707.858 Q9C0C2 Q9C0C2 684 700 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0024882 58.658 By matching By MS/MS 1 1 3380600 2108900 1271800 2778 1385 2967 6198;6199 5034 5034 1663 1 WLDESDAEMELR FLAPDFDRWLDESDAE SDAEMELRAKEEERLN R W L L R A 1 1 0 2 0 0 3 0 0 0 2 0 1 0 0 1 0 1 0 0 0 0 12 0 1492.6504 H3BPZ1;H3BS72;Q9P035 H3BPZ1 85 96 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 2 6.8036E-09 117.03 By MS/MS By matching 2 2 51356000 26653000 24702000 2779 651 2968;2969 6200;6201;6202;6203 5035;5036 5035 106 768 2 WLDGASFDNER VLRLRERRWLDGASFD GASFDNERGSTSKEGE R W L E R G 1 1 1 2 0 0 1 1 0 0 1 0 0 1 0 1 0 1 0 0 0 0 11 0 1308.5735 E7EMW7;O95071 E7EMW7 316 326 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.014274 54.343 By MS/MS By MS/MS 1 1 1040600 549880 490770 2780 402 2970 6204;6205 5037;5038 5037 2 WLPSSPSGVAK EADHLSSKWLPSSPSG SSPSGVAKAKMFKLDT K W L A K A 1 0 0 0 0 0 0 1 0 0 1 1 0 0 2 3 0 1 0 1 0 0 11 0 1127.5975 H3BP52;H3BTF4;Q8IWI9 H3BP52 445 455 MGA MAX gene-associated protein yes no 2 0.0081153 62.338 By MS/MS By MS/MS 1 1 2595100 1322800 1272300 2781 647 2971 6206;6207 5039;5040 5039 762;763 2 WRPHSPDGPR GSRRDGERWRPHSPDG PHSPDGPRSAGWREHM R W R P R S 0 2 0 1 0 0 0 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 10 1 1203.5897 I1E4Y6;Q6Y7W6;C9JH78;C9IYH5 I1E4Y6 254 263 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2;3 0.00014737 96.059 By MS/MS By MS/MS 2 2 20639000 12631000 8008100 2782 687 2972 6208;6209;6210;6211 5041;5042;5043 5043 813 3 WYRAPEIMLNSKGYTK LTEYVATRWYRAPEIM LNSKGYTKSIDIWSVG R W Y T K S 1 1 1 0 0 0 1 1 0 1 1 2 1 0 1 1 1 1 2 0 0 0 16 2 1955.9928 P28482;B3KR49;E9PJF0;E9PQW4;P27361 P28482 192 207 MAPK1;MAPK3 Mitogen-activated protein kinase 1;Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 no no 3 0.01746 42.317 By MS/MS 1 0 0 0 2783 935;260 2973 6212 5044 5044 45 1 YAALSDQGLDIK KVRPSASRYAALSDQG SDQGLDIKAAFQPEAN R Y A I K A 2 0 0 2 0 1 0 1 0 1 2 1 0 0 0 1 0 0 1 0 0 0 12 0 1292.6612 Q8WX93 Q8WX93 1348 1359 PALLD Palladin yes yes 2 0.0042043 72.643 By MS/MS By MS/MS 1 1 1211700 597510 614180 2784 1293 2974 6213;6214 5045;5046 5045 2478 2 YAAVCRPLHYTVLMHPR LVVMSYDRYAAVCRPL YTVLMHPRFCHLLAVA R Y A P R F 2 2 0 0 1 0 0 0 2 0 2 0 1 0 2 0 1 0 2 2 0 0 17 1 2083.0608 A0A140T964;A0A0G2JN32;O76001;Q9GZK6 A0A140T964 126 142 OR2J3;OR2J1 Olfactory receptor 2J3;Olfactory receptor 2J1 yes no 3 0.016119 47.201 By MS/MS 1 192980 192980 0 2785 181 2975 6215 5047 5047 2279 0 YADFSISPNAVSAEEDGYTLFVAGFEDGGAGDSLSYHSGQK ENNTAYAKYADFSISP LSYHSGQKFSTFDRDQ K Y A Q K F 5 0 1 4 0 1 3 6 1 1 2 1 0 3 1 6 1 0 3 2 0 0 41 0 4257.8927 K7ES70;P55083 K7ES70 169 209 MFAP4 Microfibril-associated glycoprotein 4 yes no 3 5.2527E-18 59.793 By matching By MS/MS 1 1 116970000 72560000 44410000 2786 739 2976 6216;6217 5048 5048 1 YADLPGIAR ________________ ADLPGIARNEPDVYET K Y A A R N 2 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 9 0 974.51853 F8W0U6;F8VRV7;F8VW18;F8W1I6;Q13561 F8W0U6 6 14 DCTN2 Dynactin subunit 2 yes no 2 0.0026904 89.752 By matching By MS/MS 1 1 5058700 2705400 2353300 2787 513 2977 6218;6219 5049 5049 2343 1 YAKESLKEEDESDDDNM DIREEAEKYAKESLKE DESDDDNM________ K Y A N M - 1 0 1 4 0 0 4 0 0 0 1 2 1 0 0 2 0 0 1 0 0 0 17 2 2016.8106 H0YJ03;G3V4X5;P25788 H0YJ03 67 83 PSMA3 Proteasome subunit alpha type-3 yes no 3 0.0044168 50.088 By MS/MS By matching 1 1 1439800 1124600 315230 2788 561 2978 6220;6221 5050 5050 93 660;661 1 YATPQVIQAPGPR QSFASDPKYATPQVIQ VIQAPGPRAGPCILPI K Y A P R A 2 1 0 0 0 2 0 1 0 1 0 0 0 0 3 0 1 0 1 1 0 0 13 0 1396.7463 H0Y5H7;C9J1X3;Q07912 H0Y5H7 394 406 TNK2 Activated CDC42 kinase 1 yes no 2 0.00061894 94.692 By matching By MS/MS 1 1 1917800 1113800 804010 2789 317 2979 6222;6223 5051 5051 2309 1 YEELQVTAGK AESWYQTKYEELQVTA ELQVTAGKHGDSLRDT K Y E G K H 1 0 0 0 0 1 2 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 10 0 1136.5714 CON__Q8VED5;CON__Q5XKE5;Q5XKE5 CON__Q8VED5 337 346 KRT79 Keratin, type II cytoskeletal 79 yes no 2 6.2133E-05 108.74 By MS/MS 1 365180 365180 0 + 2790 358 2980 6224 5052 5052 1 YEEMLKTK EAAIAVEKYEEMLKTK YEEMLKTKTLPISKLS K Y E T K T 0 0 0 0 0 0 2 0 0 0 1 2 1 0 0 0 1 0 1 0 0 0 8 1 1040.5212 O15050 O15050 1845 1852 TRANK1 TPR and ankyrin repeat-containing protein 1 yes yes 2 0.018315 50.703 By MS/MS 1 0 0 0 2791 767 2981 6225 5053 5053 120 1 YEHDDIVSTVSVLSSGTQAVSGSK LIVSKFCKYEHDDIVS TQAVSGSKDICIKVWD K Y E S K D 1 0 0 2 0 1 1 2 1 1 1 1 0 0 0 6 2 0 1 4 0 0 24 0 2465.1922 Q9BQA1;H0Y711 Q9BQA1 122 145 WDR77 Methylosome protein 50 yes no 3 0.0029467 45.972 By MS/MS By matching 1 1 1596500 1400500 195950 2792 1361 2982 6226;6227 5054 5054 1 YEMYSKNAEKPSR VNNYRSTKYEMYSKNA KNAEKPSRSKRTIKQK K Y E S R S 1 1 1 0 0 0 2 0 0 0 0 2 1 0 1 2 0 0 2 0 0 0 13 2 1601.7508 H0Y8J2;Q03188 H0Y8J2 307 319 CENPC Centromere protein C yes no 3 0.016346 45.077 By MS/MS 1 0 0 0 2793 601 2983 6228 5055 5055 98 1 YEPQSPGYEPR EFESQSPRYEPQSPGY QSPGYEPRSPGYEPRS R Y E P R S 0 1 0 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 2 0 0 0 11 0 1321.5939 H3BS42;Q9H5H4 H3BS42 90 100 ZNF768 Zinc finger protein 768 yes no 2 0.0015462 81.709 By MS/MS By MS/MS 1 1 6350600 2957000 3393600 2794 659 2984 6229;6230 5056;5057 5057 775 2 YESSSYTDQFSR DLEQPTYRYESSSYTD SYTDQFSRNYEHRLRY R Y E S R N 0 1 0 1 0 1 1 0 0 0 0 0 0 1 0 4 1 0 2 0 0 0 12 0 1468.6107 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 969 980 TJP1 Tight junction protein ZO-1 yes no 2 0.0012446 87.298 By MS/MS By MS/MS 1 1 1335600 707630 627990 2795 71 2985 6231;6232 5058;5059 5058 83;2264 2 YFAHSILTVSEEEWNTGETYTCVVAHEALPNR PEPQAPGRYFAHSILT AHEALPNRVTERTVDK R Y F N R V 3 1 2 0 1 0 5 1 2 1 2 0 0 1 1 2 4 1 2 3 0 0 32 0 3722.7311 A0A087WYJ9;A0A1B0GUU9;P04220;P01871 A0A087WYJ9 391 422 IGHM Ig mu heavy chain disease protein;Ig mu chain C region yes no 4 2.0362E-61 112.55 By MS/MS By MS/MS 1 1 33050000 23839000 9210700 2796 58 2986 6233;6234 5060;5061 5061 2 YFDSGDYNMAK SAEEQKQKYFDSGDYN SGDYNMAKAKMKNKQL K Y F A K A 1 0 1 2 0 0 0 1 0 0 0 1 1 1 0 1 0 0 2 0 0 0 11 0 1309.5285 H3BQ52;H3BTD3;H3BMD8;A6NMQ3;Q5T5H1;P56211;O43768 H3BQ52 18 28 ARPP19;ENSA cAMP-regulated phosphoprotein 19;Alpha-endosulfine yes no 2 0.0053751 67.456 By MS/MS By MS/MS 2 2 17735000 8976300 8758500 2797 235 2987;2988 6235;6236;6237;6238 5062;5063;5064 5063 40 288 3 YFQISQDEDESESED DKETYELRYFQISQDE EDESESED________ R Y F E D - 0 0 0 3 0 2 4 0 0 1 0 0 0 1 0 3 0 0 1 0 0 0 15 0 1819.6908 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 107 121 RPL22L1 60S ribosomal protein L22-like 1 yes no 2 0.0009091 81.565 By MS/MS By MS/MS 2 1 29485000 12056000 17430000 2798 347 2989 6239;6240;6241 5065;5066;5067;5068;5069 5066 411;412 5 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR DKAERAKKYGGSVGSQ SQEPPTKREYDQCRIQ K Y G K R E 1 1 0 0 0 2 2 4 0 0 0 1 0 0 10 5 1 0 1 3 0 0 31 1 3082.536 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323 E9PS08 37 67 UBXN1 UBX domain-containing protein 1 yes no 3 0.00454 46.404 By MS/MS By matching 1 1 6851900 4011500 2840400 2799 23 2990 6242;6243 5070 5070 20;21 1 YGINTTDIFQTVDLWEGK QFLQAAERYGINTTDI TVDLWEGKNMACVQRT R Y G G K N 0 0 1 2 0 1 1 2 0 2 1 1 0 1 0 0 3 1 1 1 0 0 18 0 2099.0211 X6RJP6;P37802 X6RJP6 103 120 TAGLN2 Transgelin-2 yes no 2 0.0021907 103.14 By MS/MS By matching 1 1 5298300 3529100 1769200 2800 953 2991 6244;6245 5071 5071 1 YGIYAVENEHMNR PGGRGDMKYGIYAVEN VENEHMNRLQSQRAML K Y G N R L 1 1 2 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 2 1 0 0 13 0 1594.7198 H0YJL5;H0YJJ5;Q9UEU0 H0YJL5 29 41 VTI1B Vesicle transport through interaction with t-SNAREs homolog 1B yes no 2 0.0019314 60.064 By MS/MS By matching 1 1 1235800 644800 590970 2801 622 2992 6246;6247 5072 5072 100 2358 1 YGKDATNVGDEGGFAPNILENK LKNVIKEKYGKDATNV APNILENKEGLELLKT K Y G N K E 2 0 3 2 0 0 2 4 0 1 1 2 0 1 1 0 1 0 1 1 0 0 22 1 2308.0972 P06733 P06733 200 221 ENO1 Alpha-enolase yes yes 3 0.0083714 40.81 By MS/MS By matching 1 1 2108900 1171000 937970 2802 860 2993 6248;6249 5073 5073 1 YGLFKEENPYAR RHDEIRKKYGLFKEEN KEENPYARFENN____ K Y G A R F 1 1 1 0 0 0 2 1 0 0 1 1 0 1 1 0 0 0 2 0 0 0 12 1 1485.7252 A8MXQ1;P53801 A8MXQ1 144 155 PTTG1IP Pituitary tumor-transforming gene 1 protein-interacting protein yes no 2 5.0934E-06 105.17 By MS/MS By MS/MS 1 1 5905000 3396800 2508100 2803 246 2994 6250;6251 5074;5075 5074 2293 2 YGLQDSDEEEEEHPSK FKVSHFSKYGLQDSDE EEEEHPSKTSTKKLKT K Y G S K T 0 0 0 2 0 1 5 1 1 0 1 1 0 0 1 2 0 0 1 0 0 0 16 0 1890.7755 P52948 P52948 883 898 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 3 0.00080051 65.808 By MS/MS By MS/MS 1 1 6458800 3307700 3151100 2804 1003 2995 6252;6253 5076;5077 5077 1150 2 YGMGTSVER IFICENNRYGMGTSVE GMGTSVERAAASTDYY R Y G E R A 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 1 1 0 1 1 0 0 9 0 998.44913 P08559 P08559 227 235 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.0013216 108.31 By MS/MS By MS/MS 2 2 60586000 33061000 27525000 2805 872 2996;2997 6254;6255;6256;6257 5078;5079;5080;5081;5082;5083;5084;5085 5084 144 1001;2102 8 YGQFSGLNPGGR PADKNKGKYGQFSGLN SGLNPGGRPITPPRNS K Y G G R P 0 1 1 0 0 1 0 4 0 0 1 0 0 1 1 1 0 0 1 0 0 0 12 0 1251.5996 P62136 P62136 306 317 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 2 0.0034433 74.165 By MS/MS By matching 1 1 1876800 948390 928430 2806 1020 2998 6258;6259 5086 5086 2436 1 YGRAESPDLR SVGKWQDRYGRAESPD RAESPDLRRLPGAIDV R Y G L R R 1 2 0 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 10 1 1162.5731 Q6UN15;A0A0B4J203 Q6UN15 299 308 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 no no 2 0.0074948 68.463 By MS/MS By matching 1 1 6546600 3852300 2694300 2807 1203;138 2999 6260;6261 5087 5087 171 1 YHELPTLEER CTEQEMPRYHELPTLE ELPTLEERSGPLHPGA R Y H E R S 0 1 0 0 0 0 3 0 1 0 2 0 0 0 1 0 1 0 1 0 0 0 10 0 1285.6303 Q92692 Q92692 454 463 PVRL2 Nectin-2 yes yes 2 0.0023724 83.948 By matching By MS/MS 1 1 2487300 1081700 1405600 2808 1308 3000 6262;6263 5088 5088 2482 1 YHGHSMSDPGVSYR LMELQTYRYHGHSMSD SDPGVSYRTREEIQEV R Y H Y R T 0 1 0 1 0 0 0 2 2 0 0 0 1 0 1 3 0 0 2 1 0 0 14 0 1591.6838 P08559;Q5JPU3;P29803 P08559 289 302 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 2;3 2.5887E-16 133.9 By MS/MS By MS/MS 7 7 216840000 143010000 73831000 2809 872 3001;3002;3003;3004 6264;6265;6266;6267;6268;6269;6270;6271;6272;6273;6274;6275;6276;6277 5089;5090;5091;5092;5093;5094;5095;5096;5097;5098 5093 145 1002;1003;1004;2394 10 YHIGDEILVSGGIGALVR KELANILKYHIGDEIL GGIGALVRLKSLQGDK K Y H V R L 1 1 0 1 0 0 1 4 1 3 2 0 0 0 0 1 0 0 1 2 0 0 18 0 1868.0156 H0Y8L3;Q15582 H0Y8L3 289 306 TGFBI Transforming growth factor-beta-induced protein ig-h3 yes no 3 0.00080531 63.827 By MS/MS By MS/MS 1 1 2229300 1754800 474540 2810 602 3005 6278;6279 5099;5100 5100 2 YIASVQGSTPSPR RSKADVERYIASVQGS QGSTPSPRQKSMKGFY R Y I P R Q 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 3 1 0 1 1 0 0 13 0 1361.6939 P49792;F8WBP7 P49792 11 23 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 2 0.001787 76.868 By MS/MS By MS/MS 1 1 1608200 807960 800270 2811 981 3006 6280;6281 5101;5102 5102 1128 2 YIDQEELNK KTKKIKEKYIDQEELN IDQEELNKTKPIWTRN K Y I N K T 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1150.5506 P08238;Q58FF8;Q14568;P07900 P08238 276 284 HSP90AB1;HSP90AB2P;HSP90AA2P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-alpha no no 2 0.0056343 128.61 By MS/MS By MS/MS 1 1 3701000 2460900 1240100 2812 871;868 3007 6282;6283 5103;5104 5104 2 YIEIDSDEEPR PGKSQKRKYIEIDSDE IDSDEEPRGELLSLRD K Y I P R G 0 1 0 2 0 0 3 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 11 0 1364.6096 E7EW05;Q9NVU7 E7EW05 543 553 SDAD1 Protein SDA1 homolog yes no 2 0.0018019 79.82 By MS/MS 1 916670 0 916670 2813 429 3008 6284 5105 5105 505 1 YIEIYVQK LYRNNLQKYIEIYVQK YIEIYVQKVNPSRLPV K Y I Q K V 0 0 0 0 0 1 1 0 0 2 0 1 0 0 0 0 0 0 2 1 0 0 8 0 1054.5699 A0A087WVQ6;Q00610;A0A087WX41;P53675 A0A087WVQ6 803 810 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 yes no 2 0.017222 79.451 By MS/MS 1 446140 446140 0 2814 36 3009 6285 5106 5106 1 YISLIYTNYEAGK GVEDLRCKYISLIYTN YTNYEAGKDDYVKALP K Y I G K D 1 0 1 0 0 0 1 1 0 2 1 1 0 0 0 1 1 0 3 0 0 0 13 0 1533.7715 P09211 P09211 104 116 GSTP1 Glutathione S-transferase P yes yes 2 0.0041514 72.006 By MS/MS By matching 1 1 849430 471850 377580 2815 875 3010 6286;6287 5107 5107 1 YIVTGENGHR LAFSPDGKYIVTGENG VTGENGHRPAVRIWDV K Y I H R P 0 1 1 0 0 0 1 2 1 1 0 0 0 0 0 0 1 0 1 1 0 0 10 0 1144.5625 H7C3R4;O43379 H7C3R4 147 156 WDR62 WD repeat-containing protein 62 yes no 2 0.0043139 60.59 By MS/MS 1 0 0 0 2816 681 3011 6288 5108 5108 2365 1 YLAEVACGDDR KMKGDYFRYLAEVACG EVACGDDRKQTIDNSQ R Y L D R K 2 1 0 2 1 0 1 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1267.5503 P27348;E9PG15 P27348 128 138 YWHAQ 14-3-3 protein theta yes no 2 0.0039338 73.885 By MS/MS By MS/MS 1 1 1762000 987110 774910 2817 933 3012 6289;6290 5109;5110 5109 2 YLCEGTESPYQTGQLHPAIR SRLLDVPRYLCEGTES GQLHPAIRVADLLQHI R Y L I R V 1 1 0 0 1 2 2 2 1 1 2 0 0 0 2 1 2 0 2 0 0 0 20 0 2319.0954 H0Y6V4;A0A0G2JQF6;H0Y6P5;Q5TG12;E9PGC5;Q15262 H0Y6V4 109 128 PTPRK Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase kappa yes no 3 0.001634 58.688 By MS/MS By matching 1 1 2931000 1996600 934390 2818 183 3013 6291;6292 5111 5111 231 1 YLDFVFAVK RLNSSTIKYLDFVFAV LDFVFAVKNENRFYLK K Y L V K N 1 0 0 1 0 0 0 0 0 0 1 1 0 2 0 0 0 0 1 2 0 0 9 0 1100.5906 H0YCG2;P13473 H0YCG2 129 137 LAMP2 Lysosome-associated membrane glycoprotein 2 yes no 2 0.0085218 75.213 By MS/MS 1 1083300 0 1083300 2819 612 3014 6293 5112 5112 1 YLEESDEDDLF VRAKKPIKYLEESDED ESDEDDLF________ K Y L L F - 0 0 0 3 0 0 3 0 0 0 2 0 0 1 0 1 0 0 1 0 0 0 11 0 1373.5511 P11388;J3QR57 P11388 1521 1531 TOP2A DNA topoisomerase 2-alpha yes no 1;2 5.4435E-14 146.11 By MS/MS By MS/MS 1 2 27646000 6680800 20965000 2820 888 3015 6294;6295;6296 5113;5114;5115 5113 1015 3 YLGNATAIFFLPDEGK SSWVLLMKYLGNATAI FFLPDEGKLQHLENEL K Y L G K L 2 0 1 1 0 0 1 2 0 1 2 1 0 2 1 0 1 0 1 0 0 0 16 0 1754.8879 P01009;A0A0G2JRN3;A0A024R6I7 P01009 268 283 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 3.1055E-19 122.1 By MS/MS By MS/MS 1 1 19373000 10239000 9133700 2821 836 3016 6297;6298 5116;5117 5116 6 2 YLGSPITTVPK NLVDSEMKYLGSPITT SPITTVPKLDKNPNLG K Y L P K L 0 0 0 0 0 0 0 1 0 1 1 1 0 0 2 1 2 0 1 1 0 0 11 0 1174.6598 D6RJC2;P30307 D6RJC2 165 175 CDC25C M-phase inducer phosphatase 3 yes no 2 0.0034943 71.085 By MS/MS By MS/MS 1 1 1540300 768300 771980 2822 382 3017 6299;6300 5118;5119 5118 438 2 YLHPEGLPSDYTISFLFR ALVSQPTRYLHPEGLP YTISFLFRILPDTPQE R Y L F R I 0 1 0 1 0 0 1 1 1 1 3 0 0 2 2 2 1 0 2 0 0 0 18 0 2154.0786 Q05707;A0A0A0MQT7 Q05707 1276 1293 COL14A1 Collagen alpha-1(XIV) chain yes no 3 0.00080839 72.184 By MS/MS 1 4129400 0 4129400 2823 1053 3018 6301 5120 5120 1 YLIVVTDGHPLEGYKEPCGGLEDAVNEAK GSHLKENKYLIVVTDG EDAVNEAKHLGVKVFS K Y L A K H 2 0 1 2 1 0 4 4 1 1 3 2 0 0 2 0 1 0 2 3 0 0 29 1 3172.5387 A0A087X0S5;P12109 A0A087X0S5 152 180 COL6A1 Collagen alpha-1(VI) chain yes no 4 0.011046 34.125 By matching By MS/MS 1 1 2317900 1474000 843910 2824 74 3019 6302;6303 5121 5121 1 YLLGDAPVSPSSQK HLRGQEHKYLLGDAPV PVSPSSQKLKRKAEED K Y L Q K L 1 0 0 1 0 1 0 1 0 0 2 1 0 0 2 3 0 0 1 1 0 0 14 0 1460.7511 Q9NYB0;H3BMI8 Q9NYB0 195 208 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes no 2 0.0016339 73.296 By MS/MS By matching 1 1 36385000 17336000 19049000 2825 1440 3020 6304;6305 5122 5122 1745 1 YLQIIFLHSNSIAR PSGLPELKYLQIIFLH LHSNSIARVGVNDFCP K Y L A R V 1 1 1 0 0 1 0 0 1 3 2 0 0 1 0 2 0 0 1 0 0 0 14 0 1673.9253 Q9BXN1 Q9BXN1 313 326 ASPN Asporin yes yes 3 0.0013686 60.157 By MS/MS By MS/MS 1 1 606370 370580 235790 2826 1377 3021 6306;6307 5123;5124 5123 2 YMEDSTYYK LGDFGLSRYMEDSTYY MEDSTYYKASKGKLPI R Y M Y K A 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 1 0 3 0 0 0 9 0 1198.4852 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397 E9PEI4 198 206 PTK2 Focal adhesion kinase 1 yes no 2 0.001431 81.191 By MS/MS 1 452300 452300 0 2827 414 3022 6308 5125 5125 69 2328 1 YMLTHQELASDGEIETK KALAKCEKYMLTHQEL SDGEIETKLIKGDIYK K Y M T K L 1 0 0 1 0 1 3 1 1 1 2 1 1 0 0 1 2 0 1 0 0 0 17 0 1963.9197 H7BYN4;Q02241 H7BYN4 851 867 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 3 0.0011844 53.779 By MS/MS By matching 1 1 2492200 1423900 1068300 2828 670 3023 6309;6310 5126 5126 107 793 1 YMNSDTTSPELR RWSDYVERYMNSDTTS DTTSPELREHLAQKPV R Y M L R E 0 1 1 1 0 0 1 0 0 0 1 0 1 0 1 2 2 0 1 0 0 0 12 0 1412.6242 Q96ST3 Q96ST3 1105 1116 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.0034183 95.273 By MS/MS By MS/MS 2 2 6508300 3381500 3126800 2829 1351 3024;3025 6311;6312;6313;6314 5127;5128 5128 237 1604;2208 2 YNLDASEEEDSNK EDDADLSKYNLDASEE SEEEDSNKKKSNRRSR K Y N N K K 1 0 2 2 0 0 3 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 13 0 1512.6216 O95218 O95218 183 195 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.000525 83.869 By MS/MS By matching 1 1 6451400 3003200 3448200 2830 812 3026 6315;6316 5129 5129 959 1 YNTEGRVSPSPSQESLSSSK YFNNMRMKYNTEGRVS QESLSSSKSDTDTGVC K Y N S K S 0 1 1 0 0 1 2 1 0 0 1 1 0 0 2 7 1 0 1 1 0 0 20 1 2139.008 Q5JSH3;H7BY83 Q5JSH3 554 573 WDR44 WD repeat-containing protein 44 yes no 3 0.018883 41.53 By matching By MS/MS 1 1 1687500 1052300 635250 2831 1156 3027 6317;6318 5130 5130 1 YQEDTCYGDAGSAFAVHDLEEDTWYATGILSFDK TFCAGMSKYQEDTCYG TGILSFDKSCAVAEYG K Y Q D K S 4 0 0 5 1 1 3 3 1 1 2 1 0 2 0 2 3 1 3 1 0 0 34 0 3873.6628 A0A087WU08;A0A0C4DGL8;J3QLC9;J3QR68;H0Y300;P00738 A0A087WU08 221 254 HP Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain yes no 3 4.9865E-07 55.043 By matching By MS/MS 1 1 60988000 33320000 27669000 2832 24 3028 6319;6320 5131 5131 1 YQESPGIQMK SDTPNPEKYQESPGIQ ESPGIQMKTRLKEGAS K Y Q M K T 0 0 0 0 0 2 1 1 0 1 0 1 1 0 1 1 0 0 1 0 0 0 10 0 1179.5594 E9PJ60;Q9UHI6 E9PJ60 319 328 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.00024486 91.701 By MS/MS By matching 1 1 2046200 1113500 932760 2833 454 3029 6321;6322 5132 5132 531 1 YQEVWTSSTSPR FQKSSAIRYQEVWTSS WTSSTSPRQKIPKVEL R Y Q P R Q 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 3 2 1 1 1 0 0 12 0 1439.6681 H3BUZ5;H0YN99;Q9H792 H3BUZ5 531 542 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.013839 56.404 By MS/MS 1 0 0 0 2834 630 3030 6323 5133 5133 2359 1 YQPLASTASDNDFVTPEPR KKPSTGSRYQPLASTA DFVTPEPRRTTRRHPN R Y Q P R R 2 1 1 2 0 1 1 0 0 0 1 0 0 1 3 2 2 0 1 1 0 0 19 0 2106.9858 Q15021 Q15021 1325 1343 NCAPD2 Condensin complex subunit 1 yes yes 2 0.014365 44.577 By MS/MS By matching 1 1 13883000 7382400 6500800 2835 1114 3031 6324;6325 5134 5134 1 YQQPFEDFR REGSFESRYQQPFEDF QQPFEDFRISQEHLAD R Y Q F R I 0 1 0 1 0 2 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 9 0 1228.5513 P19174;V9GY71;V9GYH5 P19174 1253 1261 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 2 0.0064604 81.594 By MS/MS By MS/MS 1 1 7603100 3572700 4030400 2836 913 3032 6326;6327 5135;5136 5136 2402 2 YRPYDGAASAYAQNYR VYSLYEPRYRPYDGAA SAYAQNYRYPEPERPS R Y R Y R Y 4 2 1 1 0 1 0 1 0 0 0 0 0 0 1 1 0 0 4 0 0 0 16 1 1864.8493 F1T0I1;J3KNL6;O15027 F1T0I1 1199 1214 SEC16A Protein transport protein Sec16A yes no 2 0.018299 42.556 By MS/MS 1 0 0 0 2837 478 3033 6328 5137 5137 2337 1 YRSDIHTEAVQAALAK SGGARDERYRSDIHTE AVQAALAKHKEQKMAL R Y R A K H 4 1 0 1 0 1 1 0 1 1 1 1 0 0 0 1 1 0 1 1 0 0 16 1 1771.9217 Q9P265 Q9P265 98 113 DIP2B Disco-interacting protein 2 homolog B yes yes 3 0.0016062 60.55 By MS/MS By matching 1 1 2802000 1391000 1411000 2838 1448 3034 6329;6330 5138 5138 2506 1 YRSPEPDPYLSYR ________________ PDPYLSYRWKRRRSYS R Y R Y R W 0 2 0 1 0 0 1 0 0 0 1 0 0 0 3 2 0 0 3 0 0 0 13 1 1641.7787 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761 H3BRT8 7 19 CLK3 Dual specificity protein kinase CLK3 yes no 3 0.0026211 68.329 By MS/MS By MS/MS 1 1 2686900 1726000 960880 2839 653 3035 6331;6332 5139;5140 5140 769 2 YRSPYSGPK RDRRFRGRYRSPYSGP RSPYSGPKFNSAIRGK R Y R P K F 0 1 0 0 0 0 0 1 0 0 0 1 0 0 2 2 0 0 2 0 0 0 9 1 1053.5243 Q5QP22;Q5QP23;G3XAC6;Q14498 Q5QP22 95 103 RBM39 RNA-binding protein 39 yes no 2;3 4.3601E-05 138.2 By MS/MS By MS/MS 2 2 39164000 19822000 19341000 2840 567 3036 6333;6334;6335;6336 5141;5142;5143;5144;5145;5146 5142 667 6 YSDEQLNSGRQSPSQNER TPINYSLKYSDEQLNS QSPSQNERWARPKHII K Y S E R W 0 2 2 1 0 3 2 1 0 0 1 0 0 0 1 4 0 0 1 0 0 0 18 1 2093.9362 P25054;E9PFT7;B7Z2B6 P25054 1031 1048 APC Adenomatous polyposis coli protein yes no 3 0.0069978 49.223 By MS/MS By matching 1 1 3716500 2343700 1372800 2841 929 3037 6337;6338 5147 5147 1046;1047 1 YSEEGLSPSKR ESPAAGPRYSEEGLSP EGLSPSKRRRLSMRNH R Y S K R R 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 3 0 0 1 0 0 0 11 1 1251.6095 A0A0C4DGI9;J3KPG5;F8VU39;Q9UIF9 A0A0C4DGI9 709 719 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 0.0038795 78.287 By MS/MS By MS/MS 1 1 4352500 2850200 1502300 2842 158 3038 6339;6340 5148;5149 5149 201 2 YSFCTDHTVLVQTR SNYEQDQKYSFCTDHT HTVLVQTRGGNSNGAL K Y S T R G 0 1 0 1 1 1 0 0 1 0 1 0 0 1 0 1 3 0 1 2 0 0 14 0 1725.8145 P02751 P02751 398 411 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 3 0.0035573 51.939 By MS/MS By matching 1 1 1167100 831170 335930 2843 843 3039 6341;6342 5150 5150 1 YSHVSQHSPSKK PSVVGLARYSHVSQHS SQHSPSKKALYNKHLP R Y S K K A 0 0 0 0 0 1 0 0 2 0 0 2 0 0 1 4 0 0 1 1 0 0 12 1 1383.6895 Q14690 Q14690 1353 1364 PDCD11 Protein RRP5 homolog yes yes 3 0.013379 61.213 By matching By MS/MS 1 1 2855200 1653000 1202300 2844 1107 3040 6343;6344 5151 5151 1 YSPSQNSPIHHIPSR SVGNGSSRYSPSQNSP PIHHIPSRRSPAKTIA R Y S S R R 0 1 1 0 0 1 0 0 2 2 0 0 0 0 3 4 0 0 1 0 0 0 15 0 1718.8489 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7;H0YF00 E9PQN2 282 296 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.00074474 77.08 By MS/MS By MS/MS 1 2 7749600 2491400 5258200 2845 457 3041 6345;6346;6347 5152;5153;5154 5152 541;542 3 YSPTSPTYSPTSPK VYTPTSPKYSPTSPTY TYSPTSPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 4 3 0 2 0 0 0 14 0 1511.7144 P24928 P24928 1909 1922 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 2 0.0041247 62.166 By MS/MS By MS/MS 2 2 10591000 5722500 4868800 2846 928 3042;3043 6348;6349;6350;6351 5155;5156;5157 5157 1044;1045;2117 3 YSPTSPTYSPTTPK KYSPTSPKYSPTSPTY TYSPTTPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 3 4 0 2 0 0 0 14 0 1525.73 P24928 P24928 1874 1887 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.0071347 77.744 By matching By MS/MS 1 1 7401400 3719400 3682000 2847 928 3044 6352;6353 5158 5158 2118 1 YSQILSHFEK CGEEAMKKYSQILSHF QILSHFEKLEPQAAVV K Y S E K L 0 0 0 0 0 1 1 0 1 1 1 1 0 1 0 2 0 0 1 0 0 0 10 0 1250.6295 Q9NYY1 Q9NYY1 142 151 IL20 Interleukin-20 yes yes 2 0.0059903 72.289 By MS/MS 1 1502300 0 1502300 2848 1442 3045 6354 5159 5159 1749 1 YSQYQQAIYK VFEKDPIKYSQYQQAI QYQQAIYKCLLDRVPE K Y S Y K C 1 0 0 0 0 3 0 0 0 1 0 1 0 0 0 1 0 0 3 0 0 0 10 0 1290.6245 G3V5T6;H0YJ77;H0YJX6;O14744 G3V5T6 86 95 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes no 2 0.0038533 77.282 By MS/MS 1 452570 452570 0 2849 566 3046 6355 5160 5160 1 YSTLHTQSAEPPPPPEPAR VCEEPQVKYSTLHTQS PPPPEPARI_______ K Y S A R I 2 1 0 0 0 1 2 0 1 0 1 0 0 0 6 2 2 0 1 0 0 0 19 0 2074.012 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 176 CD99L2 CD99 antigen-like protein 2 yes no 3 0.0116 65.231 By MS/MS By MS/MS 1 1 3268700 1526900 1741700 2850 196 3047 6356;6357 5161;5162 5162 247;2281 2 YSTLHTQSAEPPPPPEPARI VCEEPQVKYSTLHTQS PPPEPARI________ K Y S R I - 2 1 0 0 0 1 2 0 1 1 1 0 0 0 6 2 2 0 1 0 0 0 20 1 2187.096 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 177 CD99L2 CD99 antigen-like protein 2 yes no 3 2.1097E-11 95.094 By MS/MS By MS/MS 1 1 7641100 4005000 3636100 2851 196 3048 6358;6359 5163;5164;5165;5166 5164 247;2281 4 YTEFYHVPTHSDASK PRKHIVERYTEFYHVP PTHSDASKKRLIEDTE R Y T S K K 1 0 0 1 0 0 1 0 2 0 0 1 0 1 1 2 2 0 2 1 0 0 15 0 1780.8057 Q96HC4;H0YBI4 Q96HC4 247 261 PDLIM5 PDZ and LIM domain protein 5 yes no 3 0.0057624 69.456 By MS/MS By MS/MS 2 2 8584200 4566200 4018000 2852 1335 3049 6360;6361;6362;6363 5167;5168;5169 5167 2205;2487 3 YVDEENSDGETSNHR VILEKAGKYVDEENSD DGETSNHRLQETSSQS K Y V H R L 0 1 2 2 0 0 3 1 1 0 0 0 0 0 0 2 1 0 1 1 0 0 15 0 1750.703 H0YFD2;F8WFC1;Q8N9T8;H0YH26 H0YFD2 74 88 KRI1 Protein KRI1 homolog yes no 2 0.0016239 68.168 By MS/MS By MS/MS 1 1 2111800 825720 1286100 2853 544 3050 6364;6365 5170;5171 5170 639 2 YVDSEGHLYTVPIR ________________ HLYTVPIREQGNIYKP K Y V I R E 0 1 0 1 0 0 1 1 1 1 1 0 0 0 1 1 1 0 2 2 0 0 14 0 1647.8257 Q03135 Q03135 6 19 CAV1 Caveolin-1 yes yes 3 0.0079221 75.088 By MS/MS By matching 1 1 1739000 1019300 719640 2854 1047 3051 6366;6367 5172 5172 2142 1 YVELFLNSTAGASGGAYEHR DKANMQHRYVELFLNS SGGAYEHRYVELFLNS R Y V H R Y 3 1 1 0 0 0 2 3 1 0 2 0 0 1 0 2 1 0 2 1 0 0 20 0 2141.0178 G8JLB6;P31943;H0YB39 G8JLB6 356 375 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 3 0.018935 36.127 By MS/MS 1 961690 961690 0 2855 576 3052 6368 5173 5173 1 YVLINWVGEDVPDAR DSQAALPKYVLINWVG GEDVPDARKCACASHV K Y V A R K 1 1 1 2 0 0 1 1 0 1 1 0 0 0 1 0 0 1 1 3 0 0 15 0 1744.8784 Q16643;D6RCR4;D6R9W4;D6RFI1 Q16643 80 94 DBN1 Drebrin yes no 2 0.019705 48.659 By MS/MS 1 785220 0 785220 2856 1137 3053 6369 5174 5174 1 YVSGSSPDLVTR DLASHRHKYVSGSSPD SSPDLVTRKVQLSVKT K Y V T R K 0 1 0 1 0 0 0 1 0 0 1 0 0 0 1 3 1 0 1 2 0 0 12 0 1279.6408 Q15678 Q15678 589 600 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 0.00073707 88.021 By MS/MS By MS/MS 1 1 3055700 1684200 1371600 2857 1130 3054 6370;6371 5175;5176 5176 1318;1319 2 YYCFQGNQFLR SALRWLGRYYCFQGNQ FQGNQFLRFDPVRGEV R Y Y L R F 0 1 1 0 1 2 0 1 0 0 1 0 0 2 0 0 0 0 2 0 0 0 11 0 1494.6714 P02790;Q9BS19 P02790 198 208 HPX Hemopexin yes no 2 0.0049301 72.485 By MS/MS By matching 1 1 1256100 1002700 253370 2858 846 3055 6372;6373 5177 5177 1 YYEGYYAAGPGYGGR GYAPNQGRYYEGYYAA AGPGYGGRNDSDPTYG R Y Y G R N 2 1 0 0 0 0 1 5 0 0 0 0 0 0 1 0 0 0 5 0 0 0 15 0 1642.7052 A0A087WZF1;Q93052;C9JXK9;C9JUT4 A0A087WZF1 274 288 LPP Lipoma-preferred partner yes no 2 0.019239 48.284 By MS/MS By matching 1 1 750810 456540 294270 2859 60 3056 6374;6375 5178 5178 2263 1 YYLAPKIEDEEGS IADMGHLKYYLAPKIE KIEDEEGS________ K Y Y G S - 1 0 0 1 0 0 3 1 0 1 1 1 0 0 1 1 0 0 2 0 0 0 13 1 1512.6984 P12004 P12004 249 261 PCNA Proliferating cell nuclear antigen yes yes 2 0.0069929 67.113 By MS/MS By matching 1 1 1335600 739440 596170 2860 892 3057 6376;6377 5179 5179 1 YYSDSDDELTVEQR HKPYLYSKYYSDSDDE DELTVEQRRQSIAKEK K Y Y Q R R 0 1 0 3 0 1 2 0 0 0 1 0 0 0 0 2 1 0 2 1 0 0 14 0 1718.7271 Q8NFC6 Q8NFC6 480 493 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.0025989 65.043 By MS/MS By MS/MS 2 2 2329200 1132400 1196800 2861 1271 3058 6378;6379;6380;6381 5180;5181 5181 1504;1505 2 YYSIDDNQNK IRRTELKRYYSIDDNQ SIDDNQNKTHDKKEKK R Y Y N K T 0 0 2 2 0 1 0 0 0 1 0 1 0 0 0 1 0 0 2 0 0 0 10 0 1258.5466 Q8NI08;Q5TF97;Q5TF96 Q8NI08 87 96 NCOA7 Nuclear receptor coactivator 7 yes no 2 0.015524 55.353 By matching By MS/MS 1 1 874340 372650 501690 2862 1275 3059 6382;6383 5182 5182 1 YYVTIIDAPGHR LWKFETSKYYVTIIDA IIDAPGHRDFIKNMIT K Y Y H R D 1 1 0 1 0 0 0 1 1 2 0 0 0 0 1 0 1 0 2 1 0 0 12 0 1403.7197 Q5VTE0;P68104;A0A087WV01;A0A087WVQ9;A6PW80;Q5JR01 Q5VTE0 85 96 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha yes no 2;3 0.00074022 77.387 By MS/MS By matching 2 1 2867200 2345900 521350 2863 1029 3060 6384;6385;6386 5183;5184 5184 2 YYWGGQYTWDMAK HAANPNGRYYWGGQYT QYTWDMAKHGTDDGVV R Y Y A K H 1 0 0 1 0 1 0 2 0 0 0 1 1 0 0 0 1 2 3 0 0 0 13 0 1667.7079 D6REL8;P02675 D6REL8 227 239 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 2 0.016371 48.981 By MS/MS By matching 1 1 2496000 1605400 890540 2864 376 3061 6387;6388 5185 5185 61 1