Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Identification type 100ug_R1 Identification type 100ug_R2 Experiment 100ug_R1 Experiment 100ug_R2 Intensity Intensity 100ug_R1 Intensity 100ug_R2 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Deamidation (NQ) site IDs Oxidation (M) site IDs Phospho (STY) site IDs MS/MS Count AAAAAAAATMALAAPSSPTPESPTMLTK SVLRRVTRAAAAAAAA ESPTMLTKKPEDNHTQ R A A T K K 11 0 0 0 0 0 1 0 0 0 2 1 2 0 4 3 4 0 0 0 0 0 28 0 2598.3033 Q9NQS7;E9PM67 Q9NQS7 127 154 INCENP Inner centromere protein yes no 3;4 5.4933E-09 117.4 By MS/MS By MS/MS 3 2 81067000 53321000 27746000 0 2898 0;1 0;1;2;3;4 0;1;2;3;4;5 2 1145;1146 6097;6098;7870 6 AAAAAAALQAK NHKLRVDKAAAAAAAL AAAALQAKSDEKAAVA K A A A K S 8 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 11 0 955.54508 H3BM89;P36578;H3BU31 H3BM89 260 270 RPL4 60S ribosomal protein L4 yes no 2 0.012395 79.474 By matching By MS/MS 1 1 12405000 6068700 6336500 1 1225 2 5;6 6 6 1 AAAAAATAPPSPGPAQPGPR AAPARAPRAAAAAATA GPAQPGPRAQRAAPLA R A A P R A 8 1 0 0 0 1 0 2 0 0 0 0 0 0 6 1 1 0 0 0 0 0 20 0 1754.9064 Q6SPF0 Q6SPF0 151 170 SAMD1 Atherin yes yes 2;3 1.698E-06 126.04 By MS/MS By MS/MS 2 2 242330000 109910000 132410000 2 2336 3 7;8;9;10 7;8;9;10;11 10 4718 5 AAAAAWEEPSSGNGTAR ________________ SSGNGTARAGPRKRGG K A A A R A 6 1 1 0 0 0 2 2 0 0 0 0 0 0 1 2 1 1 0 0 0 0 17 0 1644.7492 Q9P258 Q9P258 6 22 RCC2 Protein RCC2 yes yes 2 2.5462E-06 126.07 By MS/MS By MS/MS 1 1 13518000 6425100 7092600 3 2972 4 11;12 12;13 13 139 6260;6261;7893 1 AAAAGLGHPASPGGSEDGPPGSEEEDAAR MAALAAMRAAAAGLGH SEEEDAAREGTPGSPG R A A A R E 7 1 0 2 0 0 4 6 1 0 1 0 0 0 4 3 0 0 0 0 0 0 29 0 2659.1746 Q99856 Q99856 67 95 ARID3A AT-rich interactive domain-containing protein 3A yes yes 3 1.387E-06 87.372 By MS/MS By MS/MS 3 2 71380000 33674000 37706000 4 2735 5;6 13;14;15;16;17 14;15;16;17;18 17 5673;5674;5675 5 AAAAPGASPSPGGDAAWSEAGPGPRPLAR RASREGGRAAAAPGAS PGPRPLARSASPPKAK R A A A R S 9 2 0 1 0 0 1 5 0 0 1 0 0 0 6 3 0 1 0 0 0 0 29 1 2641.2997 P52701;F8WAX8;F8W7G9 P52701 34 62 MSH6 DNA mismatch repair protein Msh6 yes no 3 0.0024151 56.461 By MS/MS By matching 1 1 200180000 111230000 88957000 5 1888 7 18;19 19 19 3657 1 AAAGPLDMSLPSTPDIK AADEDEKKAAAGPLDM LPSTPDIKIKEEEPVE K A A I K I 3 0 0 2 0 0 0 1 0 1 2 1 1 0 3 2 1 0 0 0 0 0 17 0 1682.8549 K7ELQ4 K7ELQ4 89 105 yes yes 2 5.381E-13 144.4 By MS/MS By MS/MS 3 3 58711000 36479000 22232000 6 1383 8;9;10 20;21;22;23;24;25 20;21;22;23;24;25;26;27;28;29;30 20 483 2547;2548;7266 11 AAALQALQAQAPTSPPPPPPPLK CHRAELERAAALQALQ PPPPPPLKAEQEEEGL R A A L K A 6 0 0 0 0 3 0 0 0 0 3 1 0 0 8 1 1 0 0 0 0 0 23 0 2260.258 Q8NAF0 Q8NAF0 470 492 ZNF579 Zinc finger protein 579 yes yes 3 0.00036554 88.471 By MS/MS By MS/MS 3 2 33807000 19026000 14781000 7 2492 11 26;27;28;29;30 31;32;33;34;35;36 34 5086;7726 6 AAALQALQAQAPTSPPPPPPPLKAEQEEEGLPLPLANIK CHRAELERAAALQALQ PLPLANIKEEPPSPGT R A A I K E 8 0 1 0 0 4 4 1 0 1 6 2 0 0 10 1 1 0 0 0 0 0 39 1 3992.1623 Q8NAF0 Q8NAF0 470 508 ZNF579 Zinc finger protein 579 yes yes 4 7.3009E-06 63.013 By MS/MS 1 17450000 0 17450000 8 2492 12 31 37 37 5086;7726 1 AAALSLSTLASPK HRKHTQQRAAALSLST LSTLASPKGGSGTAGT R A A P K G 4 0 0 0 0 0 0 0 0 0 3 1 0 0 1 3 1 0 0 0 0 0 13 0 1228.7027 P98172 P98172 277 289 EFNB1 Ephrin-B1 yes yes 2 0.0090415 75.02 By MS/MS By MS/MS 1 2 15297000 7085000 8211800 9 1970 13 32;33;34 38;39 38 3769;3770 2 AAATPESQEPQAK EGTAQEGKAAATPESQ ESQEPQAKGAEASAAS K A A A K G 4 0 0 0 0 2 2 0 0 0 0 1 0 0 2 1 1 0 0 0 0 0 13 0 1326.6416 P49006 P49006 145 157 MARCKSL1 MARCKS-related protein yes yes 2 0.00059433 118.52 By MS/MS By MS/MS 1 1 86880000 50835000 36045000 10 1849 14 35;36 40;41;42;43 41 7461 4 AAAYDISEDEED PANLSRHKAAAYDISE DISEDEED________ K A A E D - 3 0 0 3 0 0 3 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 12 0 1326.5099 P49585 P49585 356 367 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 2 0.0028225 85.924 By MS/MS By MS/MS 1 1 40090000 18462000 21628000 11 1856 15 37;38 44;45 45 3570 2 AADEDWDSELEDDLLGEDLLSGKK AERSWRRRAADEDWDS EDLLSGKKNQSDLSDE R A A K K N 2 0 0 6 0 0 4 2 0 0 5 2 0 0 0 2 0 1 0 0 0 0 24 1 2662.2134 Q96EV2;A8MTF7 Q96EV2 34 57 RBM33 RNA-binding protein 33 yes no 2;3 2.5988E-19 147.08 By MS/MS By MS/MS 1 2 49812000 14821000 34991000 12 2644 16 39;40;41 46;47;48;49 49 5452 4 AADPPAENSSAPEAEQGGAE PQDGKETKAADPPAEN EAEQGGAE________ K A A A E - 6 0 1 1 0 1 4 2 0 0 0 0 0 0 3 2 0 0 0 0 0 0 20 0 1896.7973 H0Y449;P67809 H0Y449 355 374 YBX1 Nuclease-sensitive element-binding protein 1 yes no 2 1.9804E-10 137.52 By MS/MS By MS/MS 1 1 81828000 37084000 44744000 13 1117 17 42;43 50;51;52;53 52 2113;2114 4 AADPVPSFDESSQDTSEK FLVRKAQKAADPVPSF SSQDTSEKSQDCDVQC K A A E K S 2 0 0 3 0 1 2 0 0 0 0 1 0 1 2 4 1 0 0 1 0 0 18 0 1908.8225 A0A075B754;Q96QE3 A0A075B754 806 823 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.0013247 89.877 By MS/MS By MS/MS 1 1 24255000 10773000 13482000 14 18 18 44;45 54;55 54 28;29 2 AADRLPNLSSPSAEGPPGPPSGPAPR KFLEERAKAADRLPNL PPSGPAPRKKTQEKDD K A A P R K 4 2 1 1 0 0 1 3 0 0 2 0 0 0 8 4 0 0 0 0 0 0 26 1 2494.2564 O60784 O60784 453 478 TOM1 Target of Myb protein 1 yes yes 3 2.3007E-07 98.002 By MS/MS By MS/MS 1 1 148060000 73082000 74982000 15 1527 19 46;47 56;57 56 2882;2883 2 AADSDDGAVSAPAASDGGVSK ________________ ASDGGVSKSTTSGEEL M A A S K S 6 0 0 4 0 0 0 3 0 0 0 1 0 0 1 4 0 0 0 2 0 0 21 0 1846.8181 Q96GM8 Q96GM8 2 22 TOE1 Target of EGR1 protein 1 yes yes 2 2.022E-168 240.82 By MS/MS By MS/MS 1 1 135210000 71712000 63498000 16 2653 20 48;49 58;59 58 5473 2 AAEAGGAEEQYGFLTTPTK YVMAVVDKAAEAGGAE GFLTTPTKQLGAQSPG K A A T K Q 4 0 0 0 0 1 3 3 0 0 1 1 0 1 1 0 3 0 1 0 0 0 19 0 1939.9163 P46821 P46821 1052 1070 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 2.84E-15 145.52 By MS/MS By MS/MS 2 2 84280000 46119000 38161000 17 1840 21 50;51;52;53 60;61;62;63 61 7450;8266 4 AAEDDEDDDVDTK AESATGKRAAEDDEDD EDDDVDTKKQKTDEDD R A A T K K 2 0 0 6 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 13 0 1436.5427 B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1;P06454 B8ZZQ6 87 99 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 2 8.2257E-35 172.61 By MS/MS By MS/MS 2 2 45210000 25121000 20089000 18 605 22 54;55;56;57 64;65;66 66 3 AAEHDLEVASEEEQER MKDVQTSKAAEHDLEV ASEEEQEREGSENNQP K A A E R E 3 1 0 1 0 1 6 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 16 0 1840.8075 E7ESJ3;Q9UPS8 E7ESJ3 537 552 ANKRD26 Ankyrin repeat domain-containing protein 26 yes no 2 0.00034779 99.711 By MS/MS By MS/MS 1 1 18274000 10549000 7725600 19 815 23 58;59 67;68 67 1477 2 AAESETPGKSPEK LPASETPKAAESETPG TPGKSPEKKPKIKEEA K A A E K K 2 0 0 0 0 0 3 1 0 0 0 2 0 0 2 2 1 0 0 0 0 0 13 1 1329.6412 O76021;J3QSV6 O76021 418 430 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.0015408 102.64 By MS/MS By matching 3 2 14639000 12965000 1674300 20 1562 24 60;61;62;63;64 69;70;71 70 2951 3 AAESLTAIPEPASPQLLETPIHASQIQK NQRWGAVRAAESLTAI IHASQIQKVEPAGRSR R A A Q K V 5 0 0 0 0 3 3 0 1 3 3 1 0 0 4 3 2 0 0 0 0 0 28 0 2939.5604 Q14676 Q14676 1763 1790 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3;4 4.4435E-10 89.392 By MS/MS By MS/MS 2 2 266030000 148360000 117670000 21 2098 25 65;66;67;68 72;73;74;75;76;77 73 4137 6 AAFDDAIAELDTLSEESYK DRACRLAKAAFDDAIA TLSEESYKDSTLIMQL K A A Y K D 4 0 0 3 0 0 3 0 0 1 2 1 0 1 0 2 1 0 1 0 0 0 19 0 2086.9583 P62258;K7EM20 P62258 197 215 YWHAE 14-3-3 protein epsilon yes no 2;3 7.1E-200 264.66 By MS/MS By MS/MS 3 3 198640000 96504000 102130000 22 1936 26;27 69;70;71;72;73;74 78;79;80;81;82;83 79 3731 6 AAFSKDESKEPIVEVR GKDMEEGKAAFSKDES KEPIVEVRTEEERTPN K A A V R T 2 1 0 1 0 0 3 0 0 1 0 2 0 1 1 2 0 0 0 2 0 0 16 2 1803.9367 A0A0D9SF98;A0A087WWJ5;A0A0D9SF30;A0A087WTF6;A0A087WX77;A0A087WWD4;A0A087WV75;P13591 A0A0D9SF98 276 291 NCAM1 Neural cell adhesion molecule 1 yes no 3 0.00041349 107.57 By MS/MS By MS/MS 1 1 34029000 17431000 16598000 23 32 28 75;76 84;85 85 63 2 AAFTTPDHAPLSPQSSVASSGSEQTEEQGSSR SPEELGARAAFTTPDH TEEQGSSRNTFQEDGS R A A S R N 4 1 0 1 0 3 3 2 1 0 1 0 0 1 3 8 3 0 0 1 0 0 32 0 3245.4709 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3 M0QZ22 260 291 SAMD4B Protein Smaug homolog 2 yes no 3 0.0030946 50.66 By MS/MS By matching 1 1 38135000 19922000 18213000 24 1411 29 77;78 86 86 2584;2585 1 AAGGAPSPPPPVR GLKSRGSRAAGGAPSP PSPPPPVRRASAGPAP R A A V R R 3 1 0 0 0 0 0 2 0 0 0 0 0 0 5 1 0 0 0 1 0 0 13 0 1172.6302 Q4KMP7 Q4KMP7 672 684 TBC1D10B TBC1 domain family member 10B yes yes 2 0.011825 71.548 By MS/MS By MS/MS 1 1 41830000 21341000 20490000 25 2195 30 79;80 87;88;89;90 88 4376 4 AAGISLIVPGKSPTR PNNPDLAKAAGISLIV VPGKSPTRKKSGPFGS K A A T R K 2 1 0 0 0 0 0 2 0 2 1 1 0 0 2 2 1 0 0 1 0 0 15 1 1465.8617 F2Z357;J3KPC5;P47736 F2Z357 473 487 RAP1GAP Rap1 GTPase-activating protein 1 yes no 3 0.018296 53.3 By MS/MS 1 2228100 0 2228100 26 935 31 81 91 91 1752 1 AAGSPSPLPAPDPAPK LVARYMSRAAGSPSPL PAPDPAPKSEPAAEEG R A A P K S 4 0 0 1 0 0 0 1 0 0 1 1 0 0 6 2 0 0 0 0 0 0 16 0 1471.7671 J3KRF7;J3KRY8;Q9BZE9 J3KRF7 104 119 ASPSCR1 Tether containing UBX domain for GLUT4 yes no 2 0.00034624 97.823 By MS/MS By MS/MS 2 2 44563000 24525000 20039000 27 1334 32 82;83;84;85 92;93;94;95;96;97 95 2470;2471 6 AAGSPSSSDQDEKLPGQDESTAGTSEQNDILK ACWRDGGKAAGSPSSS SEQNDILKVVEKRIAC K A A L K V 3 0 1 4 0 3 3 3 0 1 2 2 0 0 2 6 2 0 0 0 0 0 32 1 3261.4757 E7EPN9;Q9Y520 E7EPN9 186 217 PRRC2C Protein PRRC2C yes no 3 2.2988E-05 69.075 By MS/MS By MS/MS 1 1 84178000 44563000 39615000 28 802 33 86;87 98;99 98 1429 2 AAHTEDINACTLTTSPR ASEPSLHRAAHTEDIN CTLTTSPRLPVF____ R A A P R L 3 1 1 1 1 0 1 0 1 1 1 0 0 0 1 1 4 0 0 0 0 0 17 0 1856.8687 H7C155;P04049 H7C155 507 523 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 2 8.1358E-77 202.94 By MS/MS By MS/MS 1 1 57043000 32240000 24803000 29 1274 34 88;89 100;101 100 2361;7231 2 AAIDWFDGK FDDPPSAKAAIDWFDG AIDWFDGKEFHGNIIK K A A G K E 2 0 0 2 0 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 0 0 9 0 1021.4869 A0A075B7D9;H3BPE7;P35637;Q92804 A0A075B7D9 207 215 TAF15;FUS RNA-binding protein FUS;TATA-binding protein-associated factor 2N yes no 2 0.0087875 136.75 By MS/MS By MS/MS 1 1 7870900 3774600 4096300 30 23 35 90;91 102;103 103 2 AAKLSEGSQPAEEEEDQETPSR SSRVRQARAAKLSEGS EDQETPSRNLRVRADR R A A S R N 3 1 0 1 0 2 6 1 0 0 1 1 0 0 2 3 1 0 0 0 0 0 22 1 2387.0725 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 178 199 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 3.9106E-05 94.234 By MS/MS By MS/MS 2 2 92388000 49395000 42993000 31 810 36;37 92;93;94;95 104;105;106;107 104 1445;1446 4 AAKNSEEEEEEK ALTAQNGKAAKNSEEE SEEEEEEKKKAAVVVS K A A E K K 2 0 1 0 0 0 6 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 12 1 1391.6052 A0A0A0MRM9;Q14978 A0A0A0MRM9 568 579 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0011398 108.43 By MS/MS By MS/MS 1 1 36325000 22365000 13960000 32 222 38 96;97 108;109 109 389 2 AAKPGPAEAPSPTASPSGDASPPATAPYDPR TDSTASSRAAKPGPAE ATAPYDPRVLAAGGLG R A A P R V 8 1 0 2 0 0 1 2 0 0 0 1 0 0 9 4 2 0 1 0 0 0 31 1 2930.4046 Q9UPT8;M0QY97 Q9UPT8 1094 1124 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 3 0.0029689 51.758 By MS/MS By MS/MS 2 2 193620000 112010000 81619000 33 3068 39;40 98;99;100;101 110;111;112 112 6483;6484;7918 3 AALAPAKESPR SGKTHQIRAALAPAKE APAKESPRKGAAPTPP R A A P R K 4 1 0 0 0 0 1 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 11 1 1109.6193 J3KQ96;E7ETY2;H0YAB7;Q13428 J3KQ96 898 908 TCOF1 Treacle protein no no 2;3 0.00095377 86.738 By MS/MS By MS/MS 2 2 1109500000 628320000 481210000 34 822;2059 41 102;103;104;105 113;114;115 115 1492 3 AALEYLGSFDHYAT DQYQLCYRAALEYLGS GSFDHYAT________ R A A A T - 3 0 0 1 0 0 1 1 1 0 2 0 0 1 0 1 1 0 2 0 0 0 14 0 1556.7147 H0Y6Z7;P10586;H0Y380;H0Y4H1;H0Y7Z9;Q3KPI9;F5GWR7;P23468 H0Y6Z7 1540 1553 PTPRF;PTPRD Receptor-type tyrosine-protein phosphatase F;Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta no no 2;3 0.00030467 94.122 By MS/MS By MS/MS 1 2 238600000 125700000 112910000 35 1137;940 42 106;107;108 116;117;118 117 8133 3 AALGLQDSDDEDAAVDIDEQIESMFNSK NERKKLQKAALGLQDS IESMFNSKKRVKDMAA K A A S K K 4 0 1 6 0 2 3 1 0 2 2 1 1 1 0 3 0 0 0 1 0 0 28 0 3025.3346 A0A0C4DG89;Q7L014 A0A0C4DG89 797 824 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 3 4.5668E-05 75.044 By MS/MS By MS/MS 2 3 66234000 24643000 41591000 36 310 43 109;110;111;112;113 119;120;121;122;123 119 122 543 5 AALLAQYADVTDEEDEADEK SEEEKQRKAALLAQYA EEDEADEKDDSGATTM K A A E K D 5 0 0 4 0 1 4 0 0 0 2 1 0 0 0 0 1 0 1 1 0 0 20 0 2194.9754 Q96MW1 Q96MW1 129 148 CCDC43 Coiled-coil domain-containing protein 43 yes yes 2 0.00044823 116.98 By MS/MS By MS/MS 1 1 15013000 6572700 8440100 37 2687 44 114;115 124;125;126 125 7800 3 AALLKASPK NEVKKLQKAALLKASP ALLKASPKKAPGTKGT K A A P K K 3 0 0 0 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 9 1 897.56475 P50914 P50914 133 141 RPL14 60S ribosomal protein L14 yes yes 2 0.0050198 110.64 By MS/MS By MS/MS 1 1 1177700000 707120000 470610000 38 1870 45 116;117 127;128 128 3630 2 AALQELLSK KIRGSLARAALQELLS ALQELLSKGLIKLVSK R A A S K G 2 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 9 0 971.56515 P62851 P62851 86 94 RPS25 40S ribosomal protein S25 yes yes 2 0.0038666 124.08 By MS/MS By MS/MS 1 1 14317000 8513300 5803600 39 1946 46 118;119 129;130 129 2 AAMYDIISSPSKDSTK DEKEQSEKAAMYDIIS SPSKDSTKLTLRLSRV K A A T K L 2 0 0 2 0 0 0 0 0 2 0 2 1 0 1 4 1 0 1 0 0 0 16 1 1712.8291 Q6KC79 Q6KC79 342 357 NIPBL Nipped-B-like protein yes yes 2;3 6.7442E-07 122.39 By MS/MS By MS/MS 3 2 51045000 27242000 23803000 40 2307 47;48 120;121;122;123;124 131;132;133;134;135;136 136 925 4648;4649 6 AAPEASSPPASPLQHLLPGK AGESPQPKAAPEASSP LQHLLPGKAVDLGPPK K A A G K A 4 0 0 0 0 1 1 1 1 0 3 1 0 0 5 3 0 0 0 0 0 0 20 0 1967.0476 Q96TA1 Q96TA1 686 705 FAM129B Niban-like protein 1 yes yes 2;3 0.0001066 105.92 By MS/MS By MS/MS 2 2 160360000 66463000 93897000 41 2717 49 125;126;127;128 137;138;139;140;141;142 141 5638;5639 6 AAPPPPALTPDSQTVDSSCK VPSTPPPKAAPPPPAL QTVDSSCKTPEVSFLP K A A C K T 3 0 0 2 1 1 0 0 0 0 1 1 0 0 5 3 2 0 0 1 0 0 20 0 2037.9677 Q9H7N4 Q9H7N4 981 1000 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2;3 0.026621 61.757 By MS/MS 2 12154000 0 12154000 42 2849 50 129;130 143;144 143 5992 1 AAPPPPPPPPPLESSPR TISPSKEKAAPPPPPP PPLESSPRVKSPSKQA K A A P R V 2 1 0 0 0 0 1 0 0 0 1 0 0 0 10 2 0 0 0 0 0 0 17 0 1702.9043 Q5T4S7 Q5T4S7 606 622 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 3 2.8241E-05 120.9 By MS/MS By MS/MS 1 1 33218000 14008000 19211000 43 2240 51 131;132 145;146;147 145 4489 3 AAPQSPSVPK QELVNQSKAAPQSPSV PQSPSVPKKPGPPVLS K A A P K K 2 0 0 0 0 1 0 0 0 0 0 1 0 0 3 2 0 0 0 1 0 0 10 0 980.5291 E9PF10;O75694 E9PF10 924 933 NUP155 Nuclear pore complex protein Nup155 yes no 2 0.0026579 103.31 By MS/MS By MS/MS 1 1 184810000 96243000 88569000 44 861 52 133;134 148;149;150;151 150 1592 4 AAPWGSNPSPSAESTQAMDR WVNTGGPKAAPWGSNP ESTQAMDRSCNRMSSH K A A D R S 4 1 1 1 0 1 1 1 0 0 0 0 1 0 3 4 1 1 0 0 0 0 20 0 2058.9065 Q96N67;A0A1B0GWE0 Q96N67 938 957 DOCK7 Dedicator of cytokinesis protein 7 no no 2 0.02943 44.436 By MS/MS By matching 1 1 13157000 6418200 6738600 45 2689;433 53 135;136 152 152 167 1 AAQQLQQEGGLGPPPPPPPSPR MKRQAKDKAAQQLQQE PPPPPSPRRVAVPVLV K A A P R R 2 1 0 0 0 4 1 3 0 0 2 0 0 0 8 1 0 0 0 0 0 0 22 0 2218.1495 Q9H2Z4 Q9H2Z4 252 273 NKX2-4 Homeobox protein Nkx-2.4 yes yes 3 6.9505E-05 88.071 By MS/MS By MS/MS 1 1 15044000 7887200 7157300 46 2825 54 137;138 153;154;155;156 154 5922 4 AASAATAAPTATPAAQESGTIPK TNECKARRAASAATAA QESGTIPKKRQEVMKW R A A P K K 9 0 0 0 0 1 1 1 0 1 0 1 0 0 3 2 4 0 0 0 0 0 23 0 2082.0593 B8ZZ81;O00116 B8ZZ81 63 85 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes no 2 0.00030236 82.406 By MS/MS 1 15279000 15279000 0 47 604 55 139 157 157 1093 1 AASAIYR DRPKGLKRAASAIYRL RAASAIYRLFDYRGRL R A A Y R L 3 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 7 0 750.40244 Q5QPL9 Q5QPL9 104 110 RALY yes yes 2 0.030959 72.23 By matching By MS/MS 1 1 21086000 10097000 10989000 48 2229 56 140;141 158 158 1 AASAPAKESPR SGKTSQVGAASAPAKE APAKESPRKGAAPAPP G A A P R K 4 1 0 0 0 0 1 0 0 0 0 1 0 0 2 2 0 0 0 0 0 0 11 1 1083.5673 J3KQ96;E7ETY2;Q13428 J3KQ96 373 383 TCOF1 Treacle protein no no 2;3 0.0013816 88.224 By MS/MS By MS/MS 2 2 712220000 219080000 493150000 49 822;2059 57 142;143;144;145 159;160;161;162;163;164;165 165 1493 7 AASAPAKESPRK SGKTSQVGAASAPAKE PAKESPRKGAAPAPPG G A A R K G 4 1 0 0 0 0 1 0 0 0 0 2 0 0 2 2 0 0 0 0 0 0 12 2 1211.6622 J3KQ96;E7ETY2;Q13428 J3KQ96 373 384 TCOF1 Treacle protein no no 3 0.015348 73.758 By MS/MS 1 0 0 0 50 822;2059 58 146 166 166 1493 1 AASIENVLQDSSPEHCGR SSPQQGTRAASIENVL SSPEHCGRGPPADIYL R A A G R G 2 1 1 1 1 1 2 1 1 1 1 0 0 0 1 3 0 0 0 1 0 0 18 0 1968.896 K7EPJ5;O60291 K7EPJ5 552 569 MGRN1 E3 ubiquitin-protein ligase MGRN1 yes no 3 0.0015531 69.581 By MS/MS By matching 1 1 14771000 7138100 7632800 51 1388 59 147;148 167 167 2555;2556 1 AASLNYLNQPSAAPLQVSR PSSSNMKRAASLNYLN AAPLQVSRGLSASTMD R A A S R G 4 1 2 0 0 2 0 0 0 0 3 0 0 0 2 3 0 0 1 1 0 0 19 0 1999.0487 Q9NSK0 Q9NSK0 588 606 KLC4 Kinesin light chain 4 yes yes 2;3 2.7938E-71 198.24 By MS/MS By MS/MS 2 2 165800000 76909000 88887000 52 2916 60 149;150;151;152 168;169;170;171;172 172 6150 5 AASLTEDR SQPEGLRKAASLTEDR AASLTEDRDRGRDAVK K A A D R D 2 1 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 8 0 861.41921 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1044 1051 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 0.010559 90.149 By MS/MS By MS/MS 1 1 60124000 34776000 25348000 53 826 61 153;154 173;174;175;176;177 177 1523 5 AASPESASSTPESLQAR GDEDASGRAASPESAS TPESLQARRHHQFLEP R A A A R R 4 1 0 0 0 1 2 0 0 0 1 0 0 0 2 5 1 0 0 0 0 0 17 0 1687.8013 Q96BT3 Q96BT3 395 411 CENPT Centromere protein T yes yes 2 0.0076814 70.41 By MS/MS By matching 1 1 22440000 11020000 11419000 54 2627 62 155;156 178 178 5404 1 AASPPASASDLIEQQQK IKVIRNMRAASPPASA DLIEQQQKRGRREHKA R A A Q K R 4 0 0 1 0 3 1 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 17 0 1739.869 Q5VSL9 Q5VSL9 333 349 STRIP1 Striatin-interacting protein 1 yes yes 2;3 5.2256E-52 182.91 By MS/MS By MS/MS 2 1 133420000 68176000 65241000 55 2262 63 157;158;159 179;180;181;182;183;184 184 4530 6 AASPSPQSVR PEPKKIKKAASPSPQS SPSPQSVRRVSSSRSV K A A V R R 2 1 0 0 0 1 0 0 0 0 0 0 0 0 2 3 0 0 0 1 0 0 10 0 998.51451 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 745 754 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0020211 87.719 By MS/MS 1 23616000 23616000 0 56 511 64 160 185;186 185 935;936;937 2 AASQGSDSPLLPAQR AKGRLAERAASQGSDS SPLLPAQRNSIPVSPV R A A Q R N 3 1 0 1 0 2 0 1 0 0 2 0 0 0 2 3 0 0 0 0 0 0 15 0 1496.7583 H0Y507;Q5TCZ1 H0Y507 963 977 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.00061251 102.72 By MS/MS By MS/MS 1 1 20606000 11821000 8784900 57 1125 65 161;162 187;188 187 2137 2 AASSSSPGSPVASSPSR FEKPESPRAASSSSPG PVASSPSRLSPTPDGP R A A S R L 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 8 0 0 0 1 0 0 17 0 1530.7274 Q92538 Q92538 1776 1792 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.00035049 97.214 By matching By MS/MS 1 1 32335000 17209000 15125000 58 2580 66 163;164 189;190 189 5294 2 AASTDLGAGETVVGK RGRRQAKKAASTDLGA AGETVVGKVLEITELP K A A G K V 3 0 0 1 0 0 1 3 0 0 1 1 0 0 0 1 2 0 0 2 0 0 15 0 1374.6991 Q15032;H7C207 Q15032 971 985 R3HDM1 R3H domain-containing protein 1 yes no 2 0.0005134 111.81 By MS/MS By MS/MS 1 1 19647000 7547200 12100000 59 2120 67 165;166 191;192 191 4188 2 AASVAAATTSPTPR VTQRRTRRAASVAAAT ATTSPTPRTTRGRRKS R A A P R T 5 1 0 0 0 0 0 0 0 0 0 0 0 0 2 2 3 0 0 1 0 0 14 0 1299.6783 Q9Y2D9 Q9Y2D9 195 208 ZNF652 Zinc finger protein 652 yes yes 2 1.8808E-07 134.4 By MS/MS By MS/MS 1 1 19072000 11138000 7933700 60 3088 68 167;168 193;194 193 7941 2 AATAARPPAPPPAPQPPSPTPSPPRPTLAR HDIALAHRAATAARPP PPRPTLAREDNEEDED R A A A R E 7 3 0 0 0 1 0 0 0 0 1 0 0 0 13 2 3 0 0 0 0 0 30 2 2963.6094 Q96B36;H9KV91 Q96B36 71 100 AKT1S1 Proline-rich AKT1 substrate 1 yes no 3;4 6.057E-15 134.28 By MS/MS By MS/MS 3 3 239210000 124130000 115080000 61 2624 69;70 169;170;171;172;173;174 195;196;197;198;199;200;201;202;203;204;205;206;207;208;209;210 207 5396;5397;7776;7777 16 AATEALGEKSPDSATVSGYDIMK SRLKEQLKAATEALGE VSGYDIMKSKSNPDFL K A A M K S 4 0 0 2 0 0 2 2 0 1 1 2 1 0 1 3 2 0 1 1 0 0 23 1 2340.1155 Q6WCQ1;J3KSW8;H0Y7E2;H0Y2S9;K7EL39;J3QRL2;H7C3G6 Q6WCQ1 968 990 MPRIP Myosin phosphatase Rho-interacting protein yes no 3 4.2287E-05 92.289 By MS/MS By MS/MS 2 2 37400000 19121000 18278000 62 2345 71;72 175;176;177;178 211;212;213 211 943 4746 2 AATESVPCSPSPLAGEIR VHRQDMCKAATESVPC SPLAGEIRRGTSAASR K A A I R R 3 1 0 0 1 0 2 1 0 1 1 0 0 0 3 3 1 0 0 1 0 0 18 0 1840.8989 J3QKZ5;J9JIE4;J3QS16;Q8N9M1 J3QKZ5 49 66 C19orf47 Uncharacterized protein C19orf47 yes no 2 0.00078178 93.649 By MS/MS By MS/MS 1 1 36345000 19347000 16998000 63 1347 73 179;180 214;215 215 2492 2 AATNVQMYYEMIENCSSTTAK ALCIDRFRAATNVQMY NCSSTTAKLAVIWVGA R A A A K L 3 0 2 0 1 1 2 0 0 1 0 1 2 0 0 2 3 0 2 1 0 0 21 0 2411.0443 O15354 O15354 362 382 GPR37 Prosaposin receptor GPR37 yes yes 2 0.03069 48.656 By MS/MS 1 0 0 0 64 1478 74 181 216 216 532 1 AATSGVPSIYAPSTYAHLSPAK EALYAAGKAATSGVPS YAHLSPAKTPPPPAMI K A A A K T 5 0 0 0 0 0 0 1 1 1 1 1 0 0 3 4 2 0 2 1 0 0 22 0 2188.1164 S4R3V8;Q86X29 S4R3V8 266 287 LSR Lipolysis-stimulated lipoprotein receptor yes no 2;3 6.7837E-06 123 By MS/MS By MS/MS 3 3 147950000 73265000 74683000 65 2416 75;76 182;183;184;185;186;187 217;218;219;220;221;222 221 4927;4928;7703;8382 6 AAVEEGIVLGGGCALLR TDALNATRAAVEEGIV GGGCALLRCIPALDSL R A A L R C 3 1 0 0 1 0 2 4 0 1 3 0 0 0 0 0 0 0 0 2 0 0 17 0 1683.8978 P10809 P10809 430 446 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0007612 110.93 By MS/MS By matching 1 1 7031800 4251100 2780700 66 1677 77 188;189 223 223 1 AAVGQESPGGLEAGNAK PINKGRKRAAVGQESP GLEAGNAKAPKLQDLA R A A A K A 4 0 1 0 0 1 2 4 0 0 1 1 0 0 1 1 0 0 0 1 0 0 17 0 1554.7638 Q29RF7 Q29RF7 1299 1315 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 4.2728E-42 173.34 By MS/MS By MS/MS 1 1 146520000 78636000 67881000 67 2175 78 190;191 224;225 225 4324 2 AAVLSDSEDEEK EEKVAKRKAAVLSDSE SDSEDEEKASAKKSRV K A A E K A 2 0 0 2 0 0 3 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 12 0 1291.578 Q96ST2 Q96ST2 394 405 IWS1 Protein IWS1 homolog yes yes 2 0.00074473 95.264 By MS/MS By matching 2 1 48675000 29555000 19121000 68 2711 79 192;193;194 226;227 227 5595;5596 2 AAVLSDSEDEEKASAK EEKVAKRKAAVLSDSE DEEKASAKKSRVVSDA K A A A K K 4 0 0 2 0 0 3 0 0 0 1 2 0 0 0 3 0 0 0 1 0 0 16 1 1648.7792 Q96ST2 Q96ST2 394 409 IWS1 Protein IWS1 homolog yes yes 2 0.0012675 115.58 By MS/MS By MS/MS 1 1 120520000 57676000 62849000 69 2711 80 195;196 228;229;230 228 5595;5596 3 AAVPSGASTGIYEALELR FTSKGLFRAAVPSGAS IYEALELRDNDKTRYM R A A L R D 4 1 0 0 0 0 2 2 0 1 2 0 0 0 1 2 1 0 1 1 0 0 18 0 1803.9367 P06733;K7EM90;F5H1C3;E5RI09;E5RG95;K7EPM1;K7EKN2;E5RGZ4;F5H0C8;P13929;P09104 P06733 33 50 ENO1;ENO2;ENO3 Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase yes no 2;3 6.6033E-07 129.88 By MS/MS By MS/MS 4 2 36967000 25767000 11200000 70 1646 81;82 197;198;199;200;201;202 231;232;233;234;235;236 235 8221 6 AAVQELSSSILAGEDPEER HRSTPESRAAVQELSS AGEDPEERGVKLGLGD R A A E R G 3 1 0 1 0 1 4 1 0 1 2 0 0 0 1 3 0 0 0 1 0 0 19 0 1999.9698 E7ES96;P49768 E7ES96 267 285 PSEN1 Presenilin;Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 yes no 2;3 3.0394E-44 180.03 By MS/MS By MS/MS 3 3 117760000 53876000 63881000 71 813 83;84 203;204;205;206;207;208 237;238;239;240;241 238 1471;1472;1473 5 AAVSAFPTDSLER QSFFAAARAAVSAFPT FPTDSLERDLSPSSAP R A A E R D 3 1 0 1 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 1 0 0 13 0 1362.6779 O14654 O14654 1098 1110 IRS4 Insulin receptor substrate 4 yes yes 2 8.634E-10 137.81 By MS/MS By MS/MS 1 1 407830000 209270000 198560000 72 1453 85 209;210 242;243 242 2679 2 AAVVTSPPPTTAPHK ________________ PPTTAPHKERYFDRVD R A A H K E 3 0 0 0 0 0 0 0 1 0 0 1 0 0 4 1 3 0 0 2 0 0 15 0 1472.7987 P35611;E7EV99;E7ENY0;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 7 21 ADD1 Alpha-adducin yes no 2;3 1.528E-07 133.48 By MS/MS By MS/MS 2 2 218980000 113560000 105420000 73 1799 86 211;212;213;214 244;245;246;247;248;249;250 246 3394 6 AAVVTSPPPTTAPHKER ________________ TTAPHKERYFDRVDEN R A A E R Y 3 1 0 0 0 0 1 0 1 0 0 1 0 0 4 1 3 0 0 2 0 0 17 1 1757.9424 P35611;E7EV99;E7ENY0;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 7 23 ADD1 Alpha-adducin yes no 3 0.017028 56.793 By MS/MS By matching 1 1 15055000 8362200 6692600 74 1799 87 215;216 251 251 3394 1 AAYGDLSSEEEEENEPESLGVVYK TRDSGKQKAAYGDLSS ESLGVVYKSTRSAKPV K A A Y K S 2 0 1 1 0 0 7 2 0 0 2 1 0 0 1 3 0 0 2 2 0 0 24 0 2643.1712 O15541 O15541 78 101 RNF113A RING finger protein 113A yes yes 2;3 1.7998E-05 96.312 By MS/MS By MS/MS 2 2 136600000 62524000 74076000 75 1485 88 217;218;219;220 252;253;254;255;256 256 2775;2776;8196 5 ACASPSAQVEGSPVAGSDGSQPAVK LSLSPSKRACASPSAQ DGSQPAVKLEPLHFLQ R A C V K L 5 0 0 1 1 2 1 3 0 0 0 1 0 0 3 5 0 0 0 3 0 0 25 0 2356.0965 F8WDB4;Q9UFC0 F8WDB4 96 120 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 2;3 6.447E-07 103.92 By MS/MS By MS/MS 2 2 124690000 54026000 70668000 76 1053 89 221;222;223;224 257;258;259;260;261 258 1992 5 ACLDDSYASGEGLKR SGNGTLSRACLDDSYA ASGEGLKRSALSSSLR R A C K R S 2 1 0 2 1 0 1 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 15 1 1640.7464 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 891 905 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2;3 0.00045778 90.444 By MS/MS By MS/MS 2 2 23233000 11900000 11333000 77 91 90 225;226;227;228 262;263;264;265 265 7984 4 ACPGPPPPSPEPLAR DDSSRPSRACPGPPPP PSPEPLARLALAMELS R A C A R L 2 1 0 0 1 0 1 1 0 0 1 0 0 0 7 1 0 0 0 0 0 0 15 0 1541.766 A0A087WSV0;Q9HB09 A0A087WSV0 181 195 BCL2L12 Bcl-2-like protein 12 yes no 2;3 0.0016245 89.466 By MS/MS By MS/MS 1 2 19346000 0 19346000 78 25 91 229;230;231 266;267;268 267 53 3 ACSMPQELPQSPR LPEVETIRACSMPQEL QELPQSPRTRQPEPDF R A C P R T 1 1 0 0 1 2 1 0 0 0 1 0 1 0 3 2 0 0 0 0 0 0 13 0 1499.6861 Q8N5J2 Q8N5J2 93 105 FAM63A Protein FAM63A yes yes 2 0.00032914 101.72 By MS/MS By MS/MS 1 1 20249000 9811200 10438000 79 2478 92 232;233 269;270 269 1005 5067 2 ACSVEELYAIPPDADVAK ETPQSGPKACSVEELY PPDADVAKSTPKSTPV K A C A K S 4 0 0 2 1 0 2 0 0 1 1 1 0 0 2 1 0 0 1 2 0 0 18 0 1946.9295 H0YN99;Q9H792 H0YN99 790 807 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.00097699 95.183 By MS/MS By MS/MS 1 1 11778000 6303800 5474500 80 1218 93 234;235 271;272 271 8159 2 ADAASSLTVDVTPPTAK DPATTTAKADAASSLT DVTPPTAKAPTTVEDR K A D A K A 4 0 0 2 0 0 0 0 0 0 1 1 0 0 2 2 3 0 0 2 0 0 17 0 1642.8414 Q9H8Y8 Q9H8Y8 404 420 GORASP2 Golgi reassembly-stacking protein 2 yes yes 2 0.021558 62.525 By matching By MS/MS 1 1 8255600 3907000 4348600 81 2858 94 236;237 273 273 0 ADALQAGASQFETSAAK KLSELDDRADALQAGA QFETSAAKLKRKYWWK R A D A K L 6 0 0 1 0 2 1 1 0 0 1 1 0 1 0 2 1 0 0 0 0 0 17 0 1664.8006 K7ENK9;K7EKX0;J3QRU4;F8WCA0;L7N2F9;Q15836;P63027 K7ENK9 22 38 VAMP2;VAMP3 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 yes no 2;3 0.00014513 119.48 By MS/MS By MS/MS 2 1 36330000 19289000 17040000 82 1051 95 238;239;240 274;275;276 274 1990;7168 3 ADAPDAGAQSDSELPSYHQNDVSLDR AALQATARADAPDAGA QNDVSLDRGYTSDSEV R A D D R G 4 1 1 5 0 2 1 1 1 0 2 0 0 0 2 4 0 0 1 1 0 0 26 0 2757.2114 Q92538 Q92538 1289 1314 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2;3 8.8261E-06 79.94 By MS/MS By MS/MS 1 2 340350000 16004000 324350000 83 2580 96 241;242;243 277;278 278 5295 2 ADDDGIYLCEMRGRVR RLIIHRLKADDDGIYL CEMRGRVRTVANVTVK K A D V R T 1 3 0 3 1 0 1 2 0 1 1 0 1 0 0 0 0 0 1 1 0 0 16 2 1924.8884 A6NN50;O75147 A6NN50 404 419 OBSL1 Obscurin-like protein 1 yes no 2 0.03181 42.041 By MS/MS 1 0 0 0 84 483 97 244 279 279 185 1 ADDFPVRDDPSDVTDEDEGPAEPPPPPK EGSDTQRRADDFPVRD AEPPPPPKLPLPAFRL R A D P K L 2 1 0 7 0 0 3 1 0 0 0 1 0 1 8 1 1 0 0 2 0 0 28 1 3003.3258 H0Y4Z8;Q3YEC7;A0A0X1KG72 H0Y4Z8 587 614 RABL6 Rab-like protein 6 yes no 3 4.9026E-06 85.182 By MS/MS By MS/MS 1 1 129780000 61607000 68175000 85 1124 98 245;246 280;281;282;283;284 283 2133;7195 5 ADEASELACPTPK KLQELSSKADEASELA ELACPTPKEDGLAQQQ K A D P K E 3 0 0 1 1 0 2 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 13 0 1387.6289 A0A0U1RQF0;P49327 A0A0U1RQF0 2192 2204 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 1.2225E-26 180.19 By MS/MS By MS/MS 2 1 131350000 66426000 64925000 86 381 99 247;248;249 285;286;287 285 701;6941 3 ADEASELACPTPKEDGLAQQQTQLNLR KLQELSSKADEASELA QQTQLNLRSLLVNPEG K A D L R S 4 1 1 2 1 4 3 1 0 0 4 1 0 0 2 1 2 0 0 0 0 0 27 1 2982.4353 A0A0U1RQF0;P49327 A0A0U1RQF0 2192 2218 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 3 2.431E-07 115.36 By MS/MS By matching 1 1 143290000 73043000 70245000 87 381 100 250;251 288 288 701;6941 1 ADEPSSEESDLEIDK KKVEEDLKADEPSSEE ESDLEIDKEGVIEPDT K A D D K E 1 0 0 3 0 0 4 0 0 1 1 1 0 0 1 3 0 0 0 0 0 0 15 0 1662.7108 F6VDH7;Q3KNR6;P50502;Q8IZP2 F6VDH7 34 48 ST13;ST13P4 Hsc70-interacting protein;Putative protein FAM10A4 yes no 2 0.0007401 92.952 By MS/MS By MS/MS 1 1 23836000 11462000 12374000 88 996 101 252;253 289;290 290 1871;1872;1873 2 ADGAPSAAPPDGLLASPDLGLLK APPPTPLRADGAPSAA SPDLGLLKLASPELER R A D L K L 5 0 0 3 0 0 0 3 0 0 5 1 0 0 4 2 0 0 0 0 0 0 23 0 2145.1317 P17535 P17535 75 97 JUND Transcription factor jun-D yes yes 2 3.7632E-05 99.414 By MS/MS By matching 1 1 25367000 14217000 11150000 89 1718 102 254;255 291 291 3229 1 ADGKIMALGNEDGSIEIFQIPNLK VHTEISWKADGKIMAL IFQIPNLKLICTIQQH K A D L K L 2 0 2 2 0 1 2 3 0 4 2 2 1 1 1 1 0 0 0 0 0 0 24 1 2572.3207 Q8TEQ6 Q8TEQ6 546 569 GEMIN5 Gem-associated protein 5 yes yes 3 0.03184 43.823 By MS/MS 1 0 0 0 90 2546 103 256 292 292 1021 1 ADGLIERQLYEMVSLR SNWLDEKKADGLIERQ LYEMVSLRKKRLKKFP K A D L R K 1 2 0 1 0 1 2 1 0 1 3 0 1 0 0 1 0 0 1 1 0 0 16 1 1891.9826 H7BZ41;F5GZB4;Q8IVV2 H7BZ41 403 418 LOXHD1 Lipoxygenase homology domain-containing protein 1 yes no 3 0.023785 54.898 By matching By MS/MS 1 1 13048000 7016800 6031000 91 953 104 257;258 293 293 1794 1 ADGTPITQGVEMTTPSKQSNNKYAASSYL GILTVTWKADGTPITQ KYAASSYL________ K A D Y L - 3 0 2 1 0 2 1 2 0 1 1 2 1 0 2 4 4 0 2 1 0 0 29 2 3058.4553 C9JEE0 C9JEE0 152 180 IGLL1 yes yes 3 0.029193 46.956 By MS/MS 1 0 0 0 92 658 105 259 294 294 257 1 ADGYEPPVQESV ETGAKVERADGYEPPV EPPVQESV________ R A D S V - 1 0 0 1 0 1 2 1 0 0 0 0 0 0 2 1 0 0 1 2 0 0 12 0 1289.5776 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 216 227 RPS3A 40S ribosomal protein S3a yes no 2 2.9207E-09 136.33 By MS/MS By MS/MS 1 1 47780000 25150000 22629000 93 744 106 260;261 295;296 296 1344 2 ADLGPGSPPWAVK LGTSRLTRADLGPGSP GSPPWAVKTEAVSGDC R A D V K T 2 0 0 1 0 0 0 2 0 0 1 1 0 0 3 1 0 1 0 1 0 0 13 0 1293.6717 A0A0C4DH65;A5PL33;A0A087WVC5 A0A0C4DH65 281 293 KRBA1 Protein KRBA1 yes no 2 0.014425 71.529 By MS/MS By MS/MS 1 1 12682000 6976600 5705000 94 332 107 262;263 297;298 297 586 1 ADLINNLGTIAK DTGIGMTKADLINNLG NNLGTIAKSGTKAFME K A D A K S 2 0 2 1 0 0 0 1 0 2 2 1 0 0 0 0 1 0 0 0 0 0 12 0 1241.698 P07900;Q14568;P08238;Q58FF8 P08238 96 107 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2 9.8486E-07 133.42 By MS/MS By MS/MS 1 1 56529000 28330000 28199000 95 1658;1656 108 264;265 299;300 299 2 ADLNQGIGEPQSPSR LSAKLLRRADLNQGIG GEPQSPSRRVFNPYTE R A D S R R 1 1 1 1 0 2 1 2 0 1 1 0 0 0 2 2 0 0 0 0 0 0 15 0 1567.759 Q96C19 Q96C19 63 77 EFHD2 EF-hand domain-containing protein D2 yes yes 2 0.00077297 104.76 By MS/MS By MS/MS 1 1 18686000 10295000 8391000 96 2630 109 266;267 301;302 301 5407 2 ADNPSPNLMPASAQAQNAQR FHTSGQPRADNPSPNL AQAQNAQRALAGVVLP R A D Q R A 5 1 3 1 0 3 0 0 0 0 1 0 1 0 3 2 0 0 0 0 0 0 20 0 2079.9756 Q92585 Q92585 356 375 MAML1 Mastermind-like protein 1 yes yes 3 0.015893 48.919 By MS/MS By matching 1 1 11881000 4653700 7227200 97 2586 110 268;269 303 303 1035 5313 1 ADPDCSNGQPQAAPTPGAPQNRK LVVVKKAKADPDCSNG PGAPQNRKEANPTPLT K A D R K E 4 1 2 2 1 3 0 2 0 0 0 1 0 0 5 1 1 0 0 0 0 0 23 1 2376.0877 Q9BW85 Q9BW85 271 293 CCDC94 Coiled-coil domain-containing protein 94 yes yes 2 0.0065667 70.68 By MS/MS By matching 1 1 27327000 17909000 9418800 98 2761 111 270;271 304 304 0 ADPHLEFQQFPQSP VLIGMLEKADPHLEFQ FQQFPQSP________ K A D S P - 1 0 0 1 0 3 1 0 1 0 1 0 0 2 3 1 0 0 0 0 0 0 14 0 1639.7631 Q96NT5 Q96NT5 446 459 SLC46A1 Proton-coupled folate transporter yes yes 2 0.0010125 94.487 By MS/MS By MS/MS 1 2 19631000 9233500 10397000 99 2690 112 272;273;274 305;306 305 5561 2 ADRDQSPFSK SNNSREKKADRDQSPF RDQSPFSKIKQSSQDN K A D S K I 1 1 0 2 0 1 0 0 0 0 0 1 0 1 1 2 0 0 0 0 0 0 10 1 1149.5415 E9PG73;Q13427 E9PG73 667 676 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 2 0.022756 72.289 By matching By MS/MS 1 1 45263000 27661000 17602000 100 871 113 275;276 307 307 1600 1 ADSGPTQPPLSLSPAPETK EAPPGWDRADSGPTQP LSPAPETKRPGQAAKK R A D T K R 2 0 0 1 0 1 1 1 0 0 2 1 0 0 5 3 2 0 0 0 0 0 19 0 1891.9527 F1T0I1;J3KNL6;O15027;X6RGP5;A0A0C4DH09 F1T0I1 2071 2089 SEC16A Protein transport protein Sec16A yes no 2;3 1.6287E-10 141.59 By MS/MS By MS/MS 3 2 297890000 193680000 104210000 101 930 114 277;278;279;280;281 308;309;310;311;312 311 1731 5 ADSPVNGLPK LEGAKKAKADSPVNGL SPVNGLPKGRESRSRS K A D P K G 1 0 1 1 0 0 0 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 10 0 996.52401 Q96S94;A0A0A0MSF3 Q96S94 367 376 CCNL2 Cyclin-L2 yes no 2 0.028021 55.776 By MS/MS By matching 1 1 19876000 10802000 9073800 102 2710 115 282;283 313 313 5592 0 ADTSQEICSPR RFSRLPSKADTSQEIC SQEICSPRLPISASHS K A D P R L 1 1 0 1 1 1 1 0 0 1 0 0 0 0 1 2 1 0 0 0 0 0 11 0 1262.5561 P52948;H7C3P6 P52948 1020 1030 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 2 0.0016836 101.32 By MS/MS By MS/MS 1 1 39221000 20726000 18495000 103 1893 116 284;285 314;315;316 316 3663 3 ADVVPQQADPEFPRASPR EELVAIVRADVVPQQA EFPRASPRALGLTANA R A D P R A 3 2 0 2 0 2 1 0 0 0 0 0 0 1 4 1 0 0 0 2 0 0 18 1 1978.9861 Q5T5Y3 Q5T5Y3 548 565 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 3 0.031966 46.121 By MS/MS By matching 2 1 23074000 17971000 5102900 104 2243 117 286;287;288 317 317 1 AEADKIYSFTDNAPSPSIGGSSR QSRLASIKAEADKIYS PSIGGSSRLENTTPTQ K A E S R L 3 1 1 2 0 0 1 2 0 2 0 1 0 1 2 5 1 0 1 0 0 0 23 1 2369.1135 O15014 O15014 790 812 ZNF609 Zinc finger protein 609 yes yes 3 2.5022E-05 113.78 By MS/MS By MS/MS 1 1 25474000 14110000 11364000 105 1466 118 289;290 318;319;320;321;322 322 2727;2728 5 AEADKVYTFTDNAPSPSIGSASR ESRMASIKAEADKVYT PSIGSASRLECSTLVN K A E S R L 4 1 1 2 0 0 1 1 0 1 0 1 0 1 2 4 2 0 1 1 0 0 23 1 2383.1292 Q9ULD9 Q9ULD9 881 903 ZNF608 Zinc finger protein 608 yes yes 3 0.00052843 72.864 By MS/MS By MS/MS 1 1 15818000 7451400 8366900 106 3039 119 291;292 323;324 324 6394;6395 2 AEAGAGSATEFQFR VPPGADKKAEAGAGSA SATEFQFRGGFGRGRG K A E F R G 4 1 0 0 0 1 2 2 0 0 0 0 0 2 0 1 1 0 0 0 0 0 14 0 1440.6634 P46783;Q9NQ39 P46783 140 153 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 2 0.0018214 88.311 By MS/MS By matching 1 1 16743000 8126800 8616600 107 1839 120 293;294 325 325 3486 1 AEAGDNLGALVR MFHKSLERAEAGDNLG DNLGALVRGLKREDLR R A E V R G 3 1 1 1 0 0 1 2 0 0 2 0 0 0 0 0 0 0 0 1 0 0 12 0 1184.6149 P49411 P49411 316 327 TUFM Elongation factor Tu, mitochondrial yes yes 2 0.0011864 109.79 By MS/MS By MS/MS 1 1 7469300 3322800 4146500 108 1852 121 295;296 326;327 326 2 AEAPAGPALGLPSPEAESGVDR RGLRVSVKAEAPAGPA EAESGVDRGEPEPMEV K A E D R G 5 1 0 1 0 0 3 3 0 0 2 0 0 0 4 2 0 0 0 1 0 0 22 0 2090.028 Q53F19 Q53F19 13 34 C17orf85 Uncharacterized protein C17orf85 yes yes 2;3 3.6944E-18 152.38 By MS/MS By MS/MS 2 1 45091000 25962000 19128000 109 2203 122 297;298;299 328;329;330;331 330 4411 4 AEAPPLEREDSGTFSLGK ________________ SGTFSLGKMITAKPGK R A E G K M 2 1 0 1 0 0 3 2 0 0 2 1 0 1 2 2 1 0 0 0 0 0 18 1 1902.9323 G5E9Q4;O75569 G5E9Q4 8 25 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 2;3 0.00085773 106.57 By MS/MS By MS/MS 2 2 92743000 43993000 48751000 110 1101 123 300;301;302;303 332;333;334 333 2083 3 AEAPSSPDVAPAGK LRPDAAEKAEAPSSPD PDVAPAGKEDSPSASG K A E G K E 4 0 0 1 0 0 1 1 0 0 0 1 0 0 3 2 0 0 0 1 0 0 14 0 1295.6357 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 1355 1368 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 0.001132 109.95 By MS/MS By MS/MS 1 1 43207000 21559000 21648000 111 371 124 304;305 335;336 336 682 2 AEAPSSPDVAPAGKEDSPSASGR LRPDAAEKAEAPSSPD DSPSASGRVQEAARPE K A E G R V 5 1 0 2 0 0 2 2 0 0 0 1 0 0 4 5 0 0 0 1 0 0 23 1 2182.0138 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 1355 1377 PHRF1 PHD and RING finger domain-containing protein 1 yes no 3 0.028707 42.529 By matching By MS/MS 1 1 9248500 5455800 3792700 112 371 125 306;307 337 337 682 1 AEDEALLSEEDDPIDR GPQPKKVKAEDEALLS EEDDPIDRRPWTQQHL K A E D R R 2 1 0 4 0 0 4 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 16 0 1815.801 Q04721 Q04721 1771 1786 NOTCH2 Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain yes yes 2 1.9974E-31 165.58 By MS/MS By MS/MS 1 1 41463000 22320000 19142000 113 1997 126 308;309 338;339 338 3848 2 AEDGATPSPSNETPK ASSTSSPKAEDGATPS SPSNETPKKKKKRFSF K A E P K K 2 0 1 1 0 0 2 1 0 0 0 1 0 0 3 2 2 0 0 0 0 0 15 0 1499.674 P29966 P29966 138 152 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 5.022E-95 220.25 By MS/MS By MS/MS 4 5 821520000 391190000 430330000 114 1776 127;128 310;311;312;313;314;315;316;317;318 340;341;342;343;344;345;346;347;348;349;350;351 340 3345;3346;7421;7422 11 AEDGATPSPSNETPKK ASSTSSPKAEDGATPS PSNETPKKKKKRFSFK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 2 0 0 3 2 2 0 0 0 0 0 16 1 1627.7689 P29966 P29966 138 153 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 0.00044754 108.68 By MS/MS By MS/MS 4 4 126900000 75368000 51531000 115 1776 129;130 319;320;321;322;323;324;325;326 352;353;354;355;356;357;358;359 357 3345;3346;7421;7422 6 AEDGATPSPSNETPKKK ASSTSSPKAEDGATPS SNETPKKKKKRFSFKK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 3 0 0 3 2 2 0 0 0 0 0 17 2 1755.8639 P29966 P29966 138 154 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 1.5222E-09 140.3 By matching By MS/MS 2 2 144980000 4659000 140320000 116 1776 131 327;328;329;330 360;361 361 3345;3346;7421;7422 2 AEDNADTLALVFEAPNQEK NEDIITLRAEDNADTL FEAPNQEKVSDYEMKL R A E E K V 4 0 2 2 0 1 3 0 0 0 2 1 0 1 1 0 1 0 0 1 0 0 19 0 2073.9855 P12004 P12004 92 110 PCNA Proliferating cell nuclear antigen yes yes 2 1.1319E-09 160.63 By MS/MS By MS/MS 1 1 18881000 8764100 10117000 117 1685 132 331;332 362;363 363 2 AEDSDSEPEPEDNVR PLGGIKRKAEDSDSEP PEPEDNVRLWEAGWKQ K A E V R L 1 1 1 3 0 0 4 0 0 0 0 0 0 0 2 2 0 0 0 1 0 0 15 0 1687.6809 Q9H0D6 Q9H0D6 496 510 XRN2 5-3 exoribonuclease 2 yes yes 2 0.017638 84.195 By MS/MS By matching 2 1 7234300 4080600 3153700 118 2801 133;134 333;334;335 364;365 365 5850;5851 2 AEEDEILNR EEEDRKPKAEEDEILN EEDEILNRSPRNRKPR K A E N R S 1 1 1 1 0 0 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 9 0 1087.5146 P27824 P27824 574 582 CANX Calnexin yes yes 2 1.0557E-05 153.78 By MS/MS By MS/MS 1 1 10459000 4493600 5965100 119 1769 135 336;337 366;367 367 2 AEEDEILNRSPR EEEDRKPKAEEDEILN EILNRSPRNRKPRRE_ K A E P R N 1 2 1 1 0 0 3 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1427.7005 P27824 P27824 574 585 CANX Calnexin yes yes 2;3 0.0016564 106.3 By MS/MS By MS/MS 5 4 10758000000 6517100000 4241100000 120 1769 136;137 338;339;340;341;342;343;344;345;346 368;369;370;371;372 369 3333 5 AEEILEK HCTVRGAKAEEILEKG KAEEILEKGLKVREYE K A E E K G 1 0 0 0 0 0 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 7 0 830.43855 P62913;Q5VVC8;Q5VVC9 P62913 79 85 RPL11 60S ribosomal protein L11 yes no 2 0.01583 119.56 By matching By MS/MS 1 1 6264100 2876400 3387800 121 1949 138 347;348 373 373 1 AEEKENDTVTISPK LAPEANPKAEEKENDT DTVTISPKQEGFPPKG K A E P K Q 1 0 1 1 0 0 3 0 0 1 0 2 0 0 1 1 2 0 0 1 0 0 14 1 1559.7679 Q9UGU0 Q9UGU0 1511 1524 TCF20 Transcription factor 20 yes yes 2 0.022181 110.22 By MS/MS By MS/MS 1 2 15830000 9267500 6562200 122 3001 139 349;350;351 374;375 375 2 AEEKSPISINVK PSSPREVKAEEKSPIS SPISINVKTVKKEPED K A E V K T 1 0 1 0 0 0 2 0 0 2 0 2 0 0 1 2 0 0 0 1 0 0 12 1 1313.7191 Q9UK58 Q9UK58 348 359 CCNL1 Cyclin-L1 yes yes 2;3 0.00023726 113.53 By MS/MS By MS/MS 2 2 208600000 113360000 95239000 123 3017 140 352;353;354;355 376;377;378;379 379 6348 4 AEENTDQASPQEDYAGFER LEERKNEKAEENTDQA EDYAGFERLQSGHLTK K A E E R L 3 1 1 2 0 2 4 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 19 0 2155.893 Q9NU22 Q9NU22 4530 4548 MDN1 Midasin yes yes 2;3 2.0562E-10 140.84 By MS/MS By MS/MS 2 2 97362000 45568000 51794000 124 2920 141 356;357;358;359 380;381;382;383 380 6169;7881 4 AEEPPSPPVPK NGKALSSRAEEPPSPP PPSPPVPKASGSTLNS R A E P K A 1 0 0 0 0 0 2 0 0 0 0 1 0 0 5 1 0 0 0 1 0 0 11 0 1146.5921 Q96JK2 Q96JK2 789 799 DCAF5 DDB1- and CUL4-associated factor 5 yes yes 2 0.0012202 105.03 By MS/MS By MS/MS 1 1 18456000 9460000 8996100 125 2673 142 360;361 384;385 385 5505 2 AEEYEFLTPVEEAPK MVGSYGPRAEEYEFLT TPVEEAPKGMLARGSY R A E P K G 2 0 0 0 0 0 5 0 0 0 1 1 0 1 2 0 1 0 1 1 0 0 15 0 1750.8301 J3KRE2;J3KTF8;J3QQX2;P52565 J3KRE2 78 92 ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 2 0.0066983 82.543 By matching By MS/MS 1 1 7298200 4400700 2897500 126 1333 143 362;363 386 386 1 AEFAEVSK RLSQRFPKAEFAEVSK AEFAEVSKLVTDLTKV K A E S K L 2 0 0 0 0 0 2 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 8 0 879.4338 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;H0YA55;D6RHD5 B7WNR0 135 142 ALB Serum albumin yes no 2 0.027187 82.452 By MS/MS 1 2071700 2071700 0 + 127 314 144 364 387 387 1 AEFAEYASVDR PGPQTEGKAEFAEYAS AEYASVDRNKKCRQSV K A E D R N 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 11 0 1256.5673 Q9NWQ8 Q9NWQ8 222 232 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 0.0041051 87.258 By MS/MS By MS/MS 2 2 18672000 8919500 9752100 128 2936 145 365;366;367;368 388;389;390 390 8472 0 AEFSPAQFSGPK DEVAEAQRAEFSPAQF PAQFSGPKKINLNHLL R A E P K K 2 0 0 0 0 1 1 1 0 0 0 1 0 2 2 2 0 0 0 0 0 0 12 0 1264.6088 F5H5P6;Q8N5U6 F5H5P6 75 86 RNF10 RING finger protein 10 yes no 2 0.022294 64.103 By MS/MS By matching 1 1 11184000 5971700 5212700 129 978 146 369;370 391 391 1830 1 AEGEPQEESPLK SQEKQTKKAEGEPQEE PQEESPLKSKSQEEPK K A E L K S 1 0 0 0 0 1 4 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 12 0 1312.6147 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 169 180 BCLAF1 Bcl-2-associated transcription factor 1 no no 2 0.00030924 115.37 By MS/MS By MS/MS 1 1 148720000 79139000 69586000 130 2947;888 147 371;372 392;393;394;395 394 1651 4 AEGEPQEESPLKSK SQEKQTKKAEGEPQEE EESPLKSKSQEEPKDT K A E S K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 2 0 0 0 0 0 0 14 1 1527.7417 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 169 182 BCLAF1 Bcl-2-associated transcription factor 1 no no 2;3 0.0010019 85.046 By MS/MS By MS/MS 2 1 111050000 72397000 38652000 131 2947;888 148 373;374;375 396;397 396 1651 2 AEGEWEDQEALDYFSDKESGK EKGSEKGRAEGEWEDQ FSDKESGKQKFNDSEG R A E G K Q 2 0 0 3 0 1 5 2 0 0 1 2 0 1 0 2 0 1 1 0 0 0 21 1 2432.0292 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 371 391 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 9.8561E-74 195.13 By MS/MS By MS/MS 2 3 583970000 280550000 303420000 132 2947 149 376;377;378;379;380 398;399;400;401;402;403;404 403 6211;6212 7 AEGSDVANAVLDGADCIMLSGETAK IKKPRPTRAEGSDVAN MLSGETAKGDYPLEAV R A E A K G 5 0 1 3 1 0 2 3 0 1 2 1 1 0 0 2 1 0 0 2 0 0 25 0 2493.1363 P14618;B4DNK4;H3BTN5;H3BR70 P14618 343 367 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 2;3 2.8709E-10 131.32 By MS/MS By MS/MS 2 1 27527000 20830000 6697000 133 1700 150 381;382;383 405;406;407 405 636 3 AEIYALNR QELKQRQRAEIYALNR AEIYALNRVMTELEQQ R A E N R V 2 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 8 0 948.50288 Q8N300 Q8N300 37 44 CCDC23 Coiled-coil domain-containing protein 23 yes yes 2 0.011493 125.25 By MS/MS By MS/MS 1 1 18538000 7366800 11171000 134 2463 151 384;385 408;409 409 8393 2 AELEEMEEVHPSDEEEEDATK VKEDVIEKAELEEMEE EEEEDATKAEGFYQKH K A E T K A 2 0 0 2 0 0 9 0 1 0 1 1 1 0 1 1 1 0 0 1 0 0 21 0 2445.0013 E9PGC8;P78559 E9PGC8 894 914 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 3 0.0012324 65.265 By MS/MS By MS/MS 1 1 18660000 10036000 8623900 135 872 152 386;387 410;411 411 328 7108 2 AELGAGAPPAVVARTPPEPR ________________ ARTPPEPRPSPEGDPS R A E P R P 5 2 0 0 0 0 2 2 0 0 1 0 0 0 5 0 1 0 0 2 0 0 20 1 1955.0589 Q3KQU3 Q3KQU3 7 26 MAP7D1 MAP7 domain-containing protein 1 yes yes 3 0.016869 53.188 By MS/MS By matching 1 1 20849000 11580000 9268300 136 2187 153 388;389 412 412 1 AELNEFLTR FVADGIFKAELNEFLT ELNEFLTRELAEDGYS K A E T R E 1 1 1 0 0 0 2 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1091.5611 E9PL09;P23396;H0YEU2;E9PPU1;F2Z2S8;H0YF32;H0YCJ7;H0YES8;E9PQX2;E9PQ96;E9PJH4;E9PK82 E9PL09 19 27 RPS3 40S ribosomal protein S3 yes no 2 0.008436 130.75 By MS/MS By MS/MS 1 1 14380000 6602100 7777500 137 899 154 390;391 413;414 413 2 AELVCLNNTEISENSSDLSQK QVELQSRRAELVCLNN NSSDLSQKLKETQSKY R A E Q K L 1 0 3 1 1 1 3 0 0 1 3 1 0 0 0 4 1 0 0 1 0 0 21 0 2350.0958 Q9P0K7 Q9P0K7 464 484 RAI14 Ankycorbin yes yes 3 0.020351 47.225 By MS/MS 1 1702100 1702100 0 138 2964 155 392 415 415 6240;6241 1 AENGERSDLEEDNER LSEASGGRAENGERSD DLEEDNEREGTENGAI R A E E R E 1 2 2 2 0 0 5 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 15 1 1761.7402 Q8WU90 Q8WU90 375 389 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes yes 2;3 0.0002355 119 By MS/MS By MS/MS 2 1 148910000 96686000 52223000 139 2551 156 393;394;395 416;417 416 119 5211 2 AENGLLMTPCYTANFVAPEVLKR FGFAKQLRAENGLLMT VAPEVLKRQGYDAACD R A E K R Q 3 1 2 0 1 0 2 1 0 0 3 1 1 1 2 0 2 0 1 2 0 0 23 1 2593.3033 P51812;E9PGT3;Q15418 P51812 570 592 RPS6KA3;RPS6KA1 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 no no 3 5.1416E-05 90.06 By matching By MS/MS 1 1 26213000 16203000 10010000 140 1879;875 157 396;397 418 418 331 7111 1 AENNSEVGASGYGVPGPTWDR LPPHLALKAENNSEVG VPGPTWDRGANLKDYY K A E D R G 2 1 2 1 0 0 2 4 0 0 0 0 0 0 2 2 1 1 1 2 0 0 21 0 2161.9665 Q08211 Q08211 121 141 DHX9 ATP-dependent RNA helicase A yes yes 2 0.00036759 88.951 By MS/MS By MS/MS 1 1 19770000 7959600 11811000 141 2012 158 398;399 419;420 419 3878 2 AEPPPDSLRPR PPPPPPERAEPPPDSL PPDSLRPRPASLSSAS R A E P R P 1 2 0 1 0 0 1 0 0 0 1 0 0 0 4 1 0 0 0 0 0 0 11 1 1233.6466 Q9NQX0 Q9NQX0 62 72 PRDM6 Putative histone-lysine N-methyltransferase PRDM6 yes yes 2 0.024217 70.816 By matching By MS/MS 1 1 19828000 10049000 9778200 142 2901 159 400;401 421 421 6112 1 AEPSEVDMNSPK KAKQVKKKAEPSEVDM EVDMNSPKSKKAKKKE K A E P K S 1 0 1 1 0 0 2 0 0 0 0 1 1 0 2 2 0 0 0 1 0 0 12 0 1302.5762 Q9NR30 Q9NR30 62 73 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.00118 83.243 By MS/MS By MS/MS 2 2 56511000 28895000 27616000 143 2905 160;161 402;403;404;405 422;423;424;425 422 1149 6117 4 AEPVEVVAPR SPWGAEVKAEPVEVVA PVEVVAPRGKSGAALS K A E P R G 2 1 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 3 0 0 10 0 1065.5819 P09874 P09874 487 496 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0074157 99.139 By MS/MS By MS/MS 1 1 62678000 29797000 32881000 144 1665 162 406;407 426;427 427 2 AEPWLSQPASGSAYATPGAYGDIRPSAASWVGSR RPAAASPRAEPWLSQP AASWVGSRGLAYPARP R A E S R G 7 2 0 1 0 1 1 4 0 1 1 0 0 0 4 6 1 2 2 1 0 0 34 1 3462.6593 Q8NC56 Q8NC56 85 118 LEMD2 LEM domain-containing protein 2 yes yes 3 0.0039631 53.214 By MS/MS By MS/MS 1 1 33387000 17337000 16050000 145 2500 163 408;409 428;429 428 8402 2 AESPAEKVPEESVLPLVQK LSSPSDTKAESPAEKV SVLPLVQKSTLADYSA K A E Q K S 2 0 0 0 0 1 4 0 0 0 2 2 0 0 3 2 0 0 0 3 0 0 19 1 2049.0994 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 430 448 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 2.9204E-07 132.36 By MS/MS By MS/MS 1 1 154940000 73539000 81405000 146 810 164 410;411 430;431 431 1447 2 AESPDLR KWQDRYGRAESPDLRR RAESPDLRRLPGAIDV R A E L R R 1 1 0 1 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 7 0 786.38718 Q6UN15;A0A0B4J203 Q6UN15 302 308 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 2 0.0066111 126.24 By MS/MS By MS/MS 1 1 67784000 36645000 31139000 147 2338 165 412;413 432;433;434 434 4722 3 AESPESSAIESTQSTPQK VSRRAQQRAESPESSA STQSTPQKGRGRPSKT R A E Q K G 2 0 0 0 0 2 3 0 0 1 0 1 0 0 2 5 2 0 0 0 0 0 18 0 1875.8698 Q9NTI5 Q9NTI5 1356 1373 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 2;3 2.0799E-32 168.16 By MS/MS By MS/MS 4 4 593030000 309980000 283050000 148 2918 166;167 414;415;416;417;418;419;420;421 435;436;437;438;439;440;441 438 6155;6156;6157;6158;7879 7 AESPGTEPTANSTVTETNSTQPNPK PKEEDPPKAESPGTEP NSTQPNPKGSQGGNDT K A E P K G 2 0 3 0 0 1 3 1 0 0 0 1 0 0 4 3 6 0 0 1 0 0 25 0 2557.178 Q9NRM1 Q9NRM1 235 259 ENAM Enamelin yes yes 3 0.0218 54.457 By MS/MS 1 0 0 0 149 2909 168 422 442 442 6136 1 AESPSPAPPPGLR VAEGGLPRAESPSPAP PAPPPGLRGTLDLQVI R A E L R G 2 1 0 0 0 0 1 1 0 0 1 0 0 0 5 2 0 0 0 0 0 0 13 0 1274.6619 Q9BUA3 Q9BUA3 306 318 C11orf84 Uncharacterized protein C11orf84 yes yes 2;3 0.00092827 96.23 By MS/MS By MS/MS 2 1 163200000 74828000 88368000 150 2754 169 423;424;425 443;444;445;446 446 5728 4 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPK EPPPQSSRAESSSGGG DGSPPKPKDPVSAAVP R A E P K D 2 0 0 1 0 1 2 7 0 1 1 2 0 0 6 7 1 0 0 1 0 0 32 1 2934.4207 Q68EM7 Q68EM7 549 580 ARHGAP17 Rho GTPase-activating protein 17 yes yes 3 2.5692E-21 142.85 By MS/MS By MS/MS 1 1 128420000 68998000 59418000 151 2297 170 426;427 447;448 448 4622 2 AETLELSDLYVSDK LGKKRLLKAETLELSD SDLYVSDKKKDMSPPF K A E D K K 1 0 0 2 0 0 2 0 0 0 3 1 0 0 0 2 1 0 1 1 0 0 14 0 1581.7774 Q8NDI1 Q8NDI1 692 705 EHBP1 EH domain-binding protein 1 yes yes 2 0.0017988 106.76 By MS/MS By MS/MS 1 1 8718100 4544200 4173900 152 2509 171 428;429 449;450 450 7733 2 AETLMFSNNAVISMR KISQPKKRAETLMFSN NNAVISMRDEKLCLMF R A E M R D 2 1 2 0 0 0 1 0 0 1 1 0 2 1 0 2 1 0 0 1 0 0 15 0 1682.812 P48544 P48544 197 211 KCNJ5 G protein-activated inward rectifier potassium channel 4 yes yes 3 0.03133 40.278 By MS/MS 1 0 0 0 153 1844 172 430 451 451 713 1 AETNSRVSGVDGYETEGIR KLSTPGARAETNSRVS GYETEGIRGLRALGVR R A E I R G 1 2 1 1 0 0 3 3 0 1 0 0 0 0 0 2 2 0 1 2 0 0 19 1 2038.9556 Q14566 Q14566 264 282 MCM6 DNA replication licensing factor MCM6 yes yes 3 0.022081 50.851 By MS/MS By MS/MS 1 1 9089600 3865700 5223900 154 2091 173 431;432 452;453;454 453 4127 2 AETPPLPIPPPPPDIQPLER STRSLNERAETPPLPI PDIQPLERYWAAHQQL R A E E R Y 1 1 0 1 0 1 2 0 0 2 2 0 0 0 9 0 1 0 0 0 0 0 20 0 2173.1783 U3KPW8;Q8IX15 U3KPW8 279 298 HOMEZ Homeobox and leucine zipper protein Homez yes no 3 0.0016991 68.261 By MS/MS 1 10464000 10464000 0 155 2433 174 433 455 455 7709 1 AETPTESVSEPEVATK PKPLKTSKAETPTESV SEPEVATKQELQEEEE K A E T K Q 2 0 0 0 0 0 4 0 0 0 0 1 0 0 2 2 3 0 0 2 0 0 16 0 1673.7996 M0R0Q7;P18858;B4E135 M0R0Q7 192 207 LIG1 DNA ligase;DNA ligase 1 yes no 2 4.1299E-90 211.13 By MS/MS By MS/MS 2 1 133810000 73789000 60018000 156 1420 175;176 434;435;436 456;457;458 456 2602;7276 2 AETSEGSGSAPAVPEASASPK AEPAEAGKAETSEGSG PEASASPKQRRSIIRD K A E P K Q 5 0 0 0 0 0 3 2 0 0 0 1 0 0 3 5 1 0 0 1 0 0 21 0 1928.8963 A0A087X1U4;P51608;A0A087WVW7;A0A0D9SFX7;B5MCB4 A0A087X1U4 58 78 MECP2 Methyl-CpG-binding protein 2 yes no 2;3 0.00033633 89.816 By MS/MS By MS/MS 2 2 69217000 39256000 29962000 157 171 177 437;438;439;440 459;460 460 277 2 AEVPGATGGDSPHLQPAEPPGEPR ________________ AEPPGEPRREPHPAEA K A E P R R 3 1 0 1 0 1 3 4 1 0 1 0 0 0 6 1 1 0 0 1 0 0 24 0 2365.1299 A0A087WWC8;A0A0A0MQW0;A0A0A0MR39;Q9P2K5 A0A087WWC8 7 30 MYEF2 Myelin expression factor 2 yes no 3 0.0011418 64.377 By MS/MS By MS/MS 1 1 141480000 80008000 61473000 158 87 178 441;442 461;462 462 155 2 AEYVPSTPSPVPPSTPLLSAHSK ILLGGDYRAEYVPSTP PLLSAHSKTGSRDCST R A E S K T 2 0 0 0 0 0 1 0 1 0 2 1 0 0 6 5 2 0 1 2 0 0 23 0 2361.2216 Q4VCS5;E7ERM3 Q4VCS5 834 856 AMOT Angiomotin yes no 3 3.1892E-05 88.983 By MS/MS By MS/MS 4 5 156540000 75351000 81193000 159 2197 179;180;181 443;444;445;446;447;448;449;450;451 463;464;465;466;467;468;469;470 463 4382;4383;4384;7623;7624 6 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR ANVKQAYRAFAAVPTS SPEQLSFRERQKYFEL R A F F R E 7 1 0 1 0 2 2 1 1 0 1 0 0 2 9 3 2 0 0 1 0 0 33 0 3337.6368 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YCG0 A0A0G2JNZ2 1323 1355 SCRIB Protein scribble homolog yes no 3;4 3.1303E-09 82.904 By MS/MS By MS/MS 3 3 224160000 96617000 127540000 160 361 182;183 452;453;454;455;456;457 471;472;473;474;475;476 475 646;647;6936 5 AFAGPLSPAKAEDFR RDPVLTLRAFAGPLSP PAKAEDFRKLWKTPPR R A F F R K 4 1 0 1 0 0 1 1 0 0 1 1 0 2 2 1 0 0 0 0 0 0 15 1 1575.8045 Q86XL3 Q86XL3 522 536 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.0012017 80.312 By MS/MS 1 5108200 5108200 0 161 2418 184 458 477;478 477 4935 2 AFEEDIETPPTR AEDAEVTKAFEEDIET DIETPPTRNIPSPGQL K A F T R N 1 1 0 1 0 0 3 0 0 1 0 0 0 1 2 0 2 0 0 0 0 0 12 0 1403.6569 Q9P2D1 Q9P2D1 2544 2555 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 2 4.8618E-06 127.71 By MS/MS By MS/MS 1 1 17143000 7040700 10103000 162 2978 185 459;460 479;480 480 7895 2 AFGPGLQGGSAGSPAR PTKPSKVKAFGPGLQG GSAGSPARFTIDTKGA K A F A R F 3 1 0 0 0 1 0 5 0 0 1 0 0 1 2 2 0 0 0 0 0 0 16 0 1428.711 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 1072 1087 FLNA Filamin-A yes no 2 0.0003806 103.39 By MS/MS By MS/MS 1 1 90350000 48261000 42089000 163 1742 186 461;462 481;482 482 3279 2 AFGSGIDIKPGTPPIAGR KMSEMELKAFGSGIDI GTPPIAGRSTTPTSSP K A F G R S 2 1 0 1 0 0 0 4 0 3 0 1 0 1 3 1 1 0 0 0 0 0 18 1 1752.9523 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2664 2681 PRRC2C Protein PRRC2C yes no 2 0.0041696 99.011 By matching By MS/MS 1 1 54530000 30078000 24453000 164 802 187 463;464 483 483 7071 1 AFGSGYR SRIGSGRRAFGSGYRR RAFGSGYRRDDDYRGG R A F Y R R 1 1 0 0 0 0 0 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 7 0 756.35549 E7EX17;P23588;F8VP89;F8VX11 E7EX17 280 286 EIF4B Eukaryotic translation initiation factor 4B yes no 2 0.0285 76.221 By matching By MS/MS 1 1 13829000 6868100 6961400 165 837 188 465;466 484 484 1 AFITNIPFDVK ANPTKRYRAFITNIPF TNIPFDVKWQSLKDLV R A F V K W 1 0 1 1 0 0 0 0 0 2 0 1 0 2 1 0 1 0 0 1 0 0 11 0 1263.6863 A0A087X0X3;P52272;M0R019;M0R0N3;M0R2T0;M0R0Y6;M0QYQ7 A0A087X0X3 73 83 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.00024384 118.71 By MS/MS By matching 1 1 7230800 3944600 3286300 166 163 189 467;468 485 485 1 AFKCFSDLTNHK YKCEECGKAFKCFSDL FSDLTNHKRIHTGEKP K A F H K R 1 0 1 1 1 0 0 0 1 0 1 2 0 2 0 1 1 0 0 0 0 0 12 1 1466.6976 B4DX44 B4DX44 265 276 ZNF736 Zinc finger protein 736 yes yes 2 0.024017 51.528 By matching By MS/MS 1 1 326420000 168140000 158280000 167 568 190 469;470 486 486 1048 1 AFLAELEQNSPK KAQAESNKAFLAELEQ ELEQNSPKIQKVKEAL K A F P K I 2 0 1 0 0 1 2 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 12 0 1345.6878 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 1558 1569 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 4.5679E-45 193.11 By MS/MS By MS/MS 1 1 52364000 24797000 27567000 168 1115 191 471;472 487;488 488 2107 2 AFQLEEGEETEPDCK SLRKAKKRAFQLEEGE EETEPDCKYSKKHWKS R A F C K Y 1 0 0 1 1 1 5 1 0 0 1 1 0 1 1 0 1 0 0 0 0 0 15 0 1780.7462 P38432 P38432 113 127 COIL Coilin yes yes 2 2.4068E-66 203.52 By MS/MS By MS/MS 1 1 112880000 57080000 55798000 169 1807 192 473;474 489;490;491 489 7437 3 AFSEGQITR SRKKTVRRAFSEGQIT FSEGQITRRMNPTRSA R A F T R R 1 1 0 0 0 1 1 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 9 0 1007.5036 Q96GN5 Q96GN5 259 267 CDCA7L Cell division cycle-associated 7-like protein yes yes 2 0.021102 65.695 By MS/MS By matching 1 1 19542000 9498600 10043000 170 2654 193 475;476 492 492 5474 1 AFSSPQEEEEAGFTGR SSFQPKRKAFSSPQEE EEAGFTGRRMNSKMQV K A F G R R 2 1 0 0 0 1 4 2 0 0 0 0 0 2 1 2 1 0 0 0 0 0 16 0 1740.7591 A0A024RAC6;Q14241 A0A024RAC6 513 528 TCEB3 Transcription elongation factor B polypeptide 3 yes no 2 0.023766 60.628 By MS/MS By matching 1 1 11860000 7059500 4800200 171 5 194 477;478 493 493 5;6 1 AFSSTPNVVSQQACTR SVLGQCGKAFSSTPNV VSQQACTRDRSLDYSS K A F T R D 2 1 1 0 1 2 0 0 0 0 0 0 0 1 1 3 2 0 0 2 0 0 16 0 1751.8261 A0A0A0MSW5;Q96MU6 A0A0A0MSW5 206 221 ZNF778 Zinc finger protein 778 yes no 2 0.011122 59.975 By matching By MS/MS 1 1 21004000 12739000 8264600 172 261 195 479;480 494 494 453;6908 1 AFSTVPLTPVPR ILQSSDSRAFSTVPLT VPLTPVPRPSDSVSST R A F P R P 1 1 0 0 0 0 0 0 0 0 1 0 0 1 3 1 2 0 0 2 0 0 12 0 1283.7238 H0Y5D5;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3 H0Y5D5 482 493 CIZ1 Cip1-interacting zinc finger protein yes no 2 0.0013325 109.95 By MS/MS By MS/MS 1 1 36248000 21231000 15017000 173 967 196 481;482 495;496 495 7134 2 AFSTVPLTPVPRPSDSVSSTPAATSTPSK ILQSSDSRAFSTVPLT AATSTPSKQALQFFCY R A F S K Q 3 1 0 1 0 0 0 0 0 0 1 1 0 1 6 7 5 0 0 3 0 0 29 1 2884.4818 H0Y5D5;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3 H0Y5D5 482 510 CIZ1 Cip1-interacting zinc finger protein yes no 3 6.5755E-07 84.214 By MS/MS By MS/MS 1 1 30180000 17024000 13156000 174 967 197 483;484 497;498;499 497 1820;7134;7135;7136 3 AFVDFLSDEIKEER SLHTDGDKAFVDFLSD SDEIKEERKIQKHKTL K A F E R K 1 1 0 2 0 0 3 0 0 1 1 1 0 2 0 1 0 0 0 1 0 0 14 1 1696.8308 Q07021 Q07021 81 94 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes yes 3 0.0014453 139.74 By MS/MS By MS/MS 1 1 8784800 4208100 4576700 175 2009 198 485;486 500;501 501 2 AFVEDSEDEDGAGEGGSSLLQK KQLKESFRAFVEDSED GGSSLLQKRAKTRQEK R A F Q K R 2 0 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 22 0 2238.9764 Q8N9T8;H0YFD2;F8WFC1 Q8N9T8 166 187 KRI1 Protein KRI1 homolog yes no 2;3 1.3658E-35 169.77 By MS/MS By MS/MS 3 4 827690000 447880000 379810000 176 2490 199 487;488;489;490;491;492;493 502;503;504;505;506;507 504 5079 6 AGAAAGDSDEESRADDKGVMDYYLK QMMSSVGRAGAAAGDS GVMDYYLKYFSGAHDG R A G L K Y 5 1 0 5 0 0 2 3 0 0 1 2 1 0 0 2 0 0 2 1 0 0 25 2 2633.1551 O95365 O95365 330 354 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 3 0.018612 55.844 By MS/MS 1 6447600 6447600 0 177 1591 200 494 508 508 575 3014 1 AGAGMITQHSSNASPINR TRRMGDGRAGAGMITQ SNASPINRIVQISGNS R A G N R I 3 1 2 0 0 1 0 2 1 2 0 0 1 0 1 3 1 0 0 0 0 0 18 0 1810.8744 Q9NWH9;H7C3F4;H0YKH2 Q9NWH9 989 1006 SLTM SAFB-like transcription modulator yes no 2 0.031163 57.197 By MS/MS By matching 1 1 7597900 4411300 3186600 178 2933 201 495;496 509 509 1 AGAPGALSPSYDGGLHGLQSK ________________ GLHGLQSKIEDHLDEA R A G S K I 3 0 0 1 0 1 0 5 1 0 3 1 0 0 2 3 0 0 1 0 0 0 21 0 1981.9858 K7ENH8;A0A0A0MRB7;X6REB3;P15923 K7ENH8 8 28 TCF3 Transcription factor E2-alpha yes no 2;3 3.0921E-05 122.1 By MS/MS By MS/MS 2 2 155830000 92440000 63393000 179 207 202 497;498;499;500 510;511;512;513 512 368 4 AGATASKEPPLYYGVCPVYEDVPAR PSDTDTYRAGATASKE VYEDVPARNERIYVYE R A G A R N 4 1 0 1 1 0 2 2 0 0 1 1 0 0 4 1 1 0 3 3 0 0 25 1 2709.3109 Q86XL3 Q86XL3 188 212 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.00091761 71.54 By MS/MS 1 19999000 19999000 0 180 2418 203 501 514 514 8389 1 AGDDYEVLELDDVPK RHERSLGRAGDDYEVL LELDDVPKENSSGSSP R A G P K E 1 0 0 4 0 0 2 1 0 0 2 1 0 0 1 0 0 0 1 2 0 0 15 0 1676.7781 O43164 O43164 59 73 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 2 4.4667E-67 207.95 By MS/MS By MS/MS 1 1 66238000 31710000 34529000 181 1488 204 502;503 515;516 516 8197 2 AGDISCNADINPLKIGQTSSSVSFKSENFR LTGVQTDKAGDISCNA SFKSENFRHTKELNCR K A G F R H 2 1 3 2 1 1 1 2 0 3 1 2 0 2 1 6 1 0 0 1 0 0 30 2 3241.5674 P17301 P17301 1014 1043 ITGA2 Integrin alpha-2 yes yes 3 0.023733 46.132 By matching By MS/MS 1 1 8654800 5407900 3246900 182 1715 205 504;505 517 517 3223;3224;3225 0 AGDLLASLSNGYR A G Y R 2 1 1 1 0 0 0 2 0 0 3 0 0 0 0 2 0 0 1 0 0 0 13 0 1335.6783 REV__H0YCD7 yes no 2 0.025785 61.78 By MS/MS 1 69626000 69626000 0 + 183 3186 206 506 518 518 6782 1 AGDLLEDSPK EKGALKRRAGDLLEDS DLLEDSPKRPKEAENP R A G P K R 1 0 0 2 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1043.5135 P51858 P51858 158 167 HDGF Hepatoma-derived growth factor yes yes 2 0.0096823 75.589 By MS/MS By MS/MS 1 1 234630000 103480000 131150000 184 1881 207 507;508 519;520 519 3644 2 AGDLLEDSPKRPK EKGALKRRAGDLLEDS EDSPKRPKEAENPEGE R A G P K E 1 1 0 2 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 0 0 0 13 2 1424.7623 P51858 P51858 158 170 HDGF Hepatoma-derived growth factor yes yes 2;3;4 2.6478E-07 134.37 By MS/MS By MS/MS 3 3 857080000 491190000 365890000 185 1881 208 509;510;511;512;513;514 521;522;523;524;525;526;527 527 3644 7 AGDNIPEEQPVASTPTTVSDGENKK QRAKKLSKAGDNIPEE VSDGENKKDK______ K A G K K D 2 0 2 2 0 1 3 2 0 1 0 2 0 0 3 2 3 0 0 2 0 0 25 1 2583.23 Q9Y320 Q9Y320 270 294 TMX2 Thioredoxin-related transmembrane protein 2 yes yes 3 0.020299 43.583 By MS/MS 1 9570400 9570400 0 186 3102 209 515 528 528 6660 1 AGDPGEMPQSPTGLGQPK AGLAPKRRAGDPGEMP PTGLGQPKRRGRPPSK R A G P K R 1 0 0 1 0 2 1 4 0 0 1 1 1 0 4 1 1 0 0 0 0 0 18 0 1765.8305 J3KPG5;F8VU39;Q9UIF9;H0YHL2;A0A0C4DGI9 J3KPG5 1358 1375 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 9.683E-05 116.9 By MS/MS By MS/MS 1 1 169300000 86807000 82498000 187 1011 210 516;517 529;530 529 365 1898 2 AGDRNSEDDGVVMTFSSVK QGESEEDRAGDRNSED VMTFSSVKVSEEVEKG R A G V K V 1 1 1 3 0 0 1 2 0 0 0 1 1 1 0 3 1 0 0 3 0 0 19 1 2012.9109 Q9NY61 Q9NY61 198 216 AATF Protein AATF yes yes 3 0.00067473 85.11 By MS/MS By MS/MS 1 1 17586000 9726500 7859800 188 2945 211 518;519 531;532 532 1172 6204 2 AGELTEDEVER ADIDLTKRAGELTEDE LTEDEVERVITIMQNP R A G E R V 1 1 0 1 0 0 4 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1246.5677 P62269 P62269 56 66 RPS18 40S ribosomal protein S18 yes yes 2 0.0023673 105.98 By matching By MS/MS 1 1 41133000 21201000 19932000 189 1939 212 520;521 533 533 1 AGEPDGESLDEQPSSSSSKRSLLSR DTSFLNSKAGEPDGES SKRSLLSRKFRGSKRS K A G S R K 1 2 0 2 0 1 3 2 0 0 3 1 0 0 2 8 0 0 0 0 0 0 25 2 2618.242 Q9H3Q1;J3KRZ9 Q9H3Q1 57 81 CDC42EP4 Cdc42 effector protein 4 yes no 3 0.029641 51.758 By MS/MS 1 0 0 0 190 2828 213 522 534 534 1 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR NDVTEGQRAGEPNSPD PAGVHPPR________ R A G P R - 5 1 2 3 1 0 3 3 1 0 0 0 0 0 6 2 1 0 0 2 0 0 30 0 3013.3108 Q08J23 Q08J23 738 767 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 3;4 5.0036E-10 109.4 By MS/MS By MS/MS 4 3 324380000 181140000 143240000 191 2018 214;215 523;524;525;526;527;528;529 535;536;537;538;539;540;541;542;543;544 542 3901;3902 10 AGEQQLSEPEDMEMEAGDTDDPPR QQQQQQQKAGEQQLSE GDTDDPPRITQNPVIN K A G P R I 2 1 0 4 0 2 5 2 0 0 1 0 2 0 3 1 1 0 0 0 0 0 24 0 2646.0698 H3BMF6;Q93009 H3BMF6 12 35 USP7 Ubiquitin carboxyl-terminal hydrolase 7 yes no 2 3.0632E-05 102.08 By MS/MS 1 0 0 0 192 1227 216 530 545 545 441;442 2289 1 AGGAGFGTDGDDQEAINEAISVK DEPDVPERAGGAGFGT INEAISVKQEVTDMNY R A G V K Q 4 0 1 3 0 1 2 5 0 2 0 1 0 1 0 1 1 0 0 1 0 0 23 0 2221.0135 Q96EB6;B0QZ35;E9PC49 Q96EB6 712 734 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes no 2 9.2681E-60 181.64 By MS/MS By MS/MS 1 1 29955000 14235000 15720000 193 2641 217 531;532 546;547 546 7787 2 AGGASPAASSTAQPPTQHR GGGGGPVRAGGASPAA AQPPTQHRLVARNGEA R A G H R L 5 1 0 0 0 2 0 2 1 0 0 0 0 0 3 3 2 0 0 0 0 0 19 0 1790.866 Q8IU81 Q8IU81 449 467 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2;3 3.265E-16 151.41 By matching By MS/MS 1 2 56240000 16114000 40126000 194 2424 218 533;534;535 548;549 549 4956 2 AGGGGGLGAGSPALSGGQGR PGAALQRRAGGGGGLG ALSGGQGRRRKQPPRP R A G G R R 3 1 0 0 0 1 0 10 0 0 2 0 0 0 1 2 0 0 0 0 0 0 20 0 1582.7812 Q6IQ22 Q6IQ22 11 30 RAB12 Ras-related protein Rab-12 yes yes 2 0.017762 58.831 By MS/MS By MS/MS 1 1 16997000 9132100 7865300 195 2305 219 536;537 550;551 550 4646 2 AGGIETIANEYSDR SCYVAVARAGGIETIA IANEYSDRCTPACISF R A G D R C 2 1 1 1 0 0 2 2 0 2 0 0 0 0 0 1 1 0 1 0 0 0 14 0 1494.6951 A0A087WYC1;P34932;A0A087WTS8 A0A087WYC1 20 33 HSPA4 Heat shock 70 kDa protein 4 yes no 2 9.8279E-11 141.1 By MS/MS By MS/MS 1 1 21130000 10542000 10588000 196 120 220 538;539 552;553 553 2 AGGPATPLSPTR MATPLPGRAGGPATPL ATPLSPTRLSRLQEKE R A G T R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 2 0 0 0 0 0 12 0 1123.5986 Q03252 Q03252 29 40 LMNB2 Lamin-B2 yes yes 2 0.0014996 92.039 By MS/MS By MS/MS 3 3 414310000 230810000 183500000 197 1995 221;222 540;541;542;543;544;545 554;555;556;557;558;559 556 3845;7526;7527 5 AGGPTTPLSPTR VPPRMGSRAGGPTTPL TTPLSPTRLSRLQEKE R A G T R L 1 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 3 0 0 0 0 0 12 0 1153.6091 P20700;E9PBF6;A0A0D9SFY5;A0A0D9SFE5 P20700 15 26 LMNB1 Lamin-B1 yes no 2 0.0010021 116.9 By MS/MS By MS/MS 2 2 610500000 311350000 299140000 198 1739 223;224 546;547;548;549 560;561;562 560 3274;7408 3 AGGSAALSPSK GMAKKVTKAGGSAALS SAALSPSKKRKNSKKK K A G S K K 3 0 0 0 0 0 0 2 0 0 1 1 0 0 1 3 0 0 0 0 0 0 11 0 944.49271 Q92522 Q92522 24 34 H1FX Histone H1x yes yes 2 0.0003838 113.76 By MS/MS By MS/MS 2 1 394850000 252550000 142300000 199 2579 225 550;551;552 563;564;565;566;567;568 564 5292;5293 6 AGGSAALSPSKK GMAKKVTKAGGSAALS AALSPSKKRKNSKKKN K A G K K R 3 0 0 0 0 0 0 2 0 0 1 2 0 0 1 3 0 0 0 0 0 0 12 1 1072.5877 Q92522 Q92522 24 35 H1FX Histone H1x yes yes 2;3 9.3399E-12 153 By MS/MS By MS/MS 3 1 62428000 47144000 15284000 200 2579 226 553;554;555;556 569;570;571;572;573;574;575 575 5292;5293 7 AGGSVESLR HLDKPKLKAGGSVESL GGSVESLRSSLSGQSS K A G L R S 1 1 0 0 0 0 1 2 0 0 1 0 0 0 0 2 0 0 0 1 0 0 9 0 874.45084 O94885 O94885 504 512 SASH1 SAM and SH3 domain-containing protein 1 yes yes 2 0.016565 69.65 By MS/MS By MS/MS 1 1 12039000 5412100 6626500 201 1573 227 557;558 576;577 577 2980 2 AGGTALLPGPPAPSPLPATPLSAK PSEGFSLKAGGTALLP PATPLSAKEDASKEDV K A G A K E 5 0 0 0 0 0 0 3 0 0 4 1 0 0 7 2 2 0 0 0 0 0 24 0 2180.2205 M0QZS0;Q6ZSZ5 M0QZS0 778 801 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes no 2;3 2.163E-05 88.09 By MS/MS By MS/MS 2 2 33500000 19513000 13987000 202 1416 228 559;560;561;562 578;579;580 579 2595 3 AGIIASAR LTDSLVCKAGIIASAR AGIIASARAGETRFTD K A G A R A 3 1 0 0 0 0 0 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 8 0 757.44464 P13639 P13639 43 50 EEF2 Elongation factor 2 yes yes 2 0.018956 99.375 By MS/MS By MS/MS 1 1 8291100 3749000 4542100 203 1693 229 563;564 581;582 581 2 AGKLSPLK ATKIKKLRAGKLSPLK AGKLSPLKSKFKTGKL R A G L K S 1 0 0 0 0 0 0 1 0 0 2 2 0 0 1 1 0 0 0 0 0 0 8 1 812.51199 Q03164;E9PR05;H0YNL8;A0A0A6YY96 Q03164 275 282 KMT2A;IREB2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 0.01932 91.123 By MS/MS By matching 1 1 59428000 34826000 24602000 204 1994 230 565;566 583 583 3834 1 AGKPGLPAPDELVYQVPQSTQEVSGAGR QAQYDTPKAGKPGLPA QEVSGAGRDGECDVFK K A G G R D 3 1 0 1 0 3 2 4 0 0 2 1 0 0 4 2 1 0 1 3 0 0 28 1 2850.4512 Q96PD2 Q96PD2 737 764 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 yes yes 3 0.0051761 57.745 By MS/MS 1 19293000 0 19293000 205 2693 231 567 584 584 8429 1 AGLASPEEEDAVGKEPLK LLLAHKKKAGLASPEE AVGKEPLKAAPKKRQL K A G L K A 3 0 0 1 0 0 4 2 0 0 2 2 0 0 2 1 0 0 0 1 0 0 18 1 1838.9262 Q9UNS1 Q9UNS1 1145 1162 TIMELESS Protein timeless homolog yes yes 2 8.2124E-05 124.68 By MS/MS By MS/MS 1 1 34367000 15265000 19102000 206 3061 232 568;569 585;586 586 6459 2 AGLESGAEPGDGDSDTTK SKKDKKAKAGLESGAE DGDSDTTKKKKKKKKA K A G T K K 2 0 0 3 0 0 2 4 0 0 1 1 0 0 1 2 2 0 0 0 0 0 18 0 1705.7279 O60832 O60832 481 498 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 5.4162E-107 219.03 By MS/MS By MS/MS 3 2 424580000 230930000 193650000 207 1530 233;234 570;571;572;573;574 587;588;589;590;591;592 587 2888;2889;7332;7333 6 AGLESGAEPGDGDSDTTKK SKKDKKAKAGLESGAE GDSDTTKKKKKKKKAK K A G K K K 2 0 0 3 0 0 2 4 0 0 1 2 0 0 1 2 2 0 0 0 0 0 19 1 1833.8228 O60832 O60832 481 499 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2;3 0.00019015 120.59 By MS/MS By MS/MS 2 2 133400000 74076000 59320000 208 1530 235 575;576;577;578 593;594;595;596 593 2888;2889;7332;7333 4 AGLGSPERPPK GSPPSVQRAGLGSPER GSPERPPKTSPGSPRL R A G P K T 1 1 0 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 1 1107.6037 Q9H6F5;H0YG79 Q9H6F5 54 64 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 0.0006378 114.24 By MS/MS By MS/MS 1 2 321090000 153320000 167770000 209 2841 236 579;580;581 597;598;599;600 599 5970 4 AGLGSPERPPKTSPGSPR GSPPSVQRAGLGSPER KTSPGSPRLQQGAGLE R A G P R L 1 2 0 0 0 0 1 3 0 0 1 1 0 0 5 3 1 0 0 0 0 0 18 2 1789.9435 Q9H6F5;H0YG79 Q9H6F5 54 71 CCDC86 Coiled-coil domain-containing protein 86 yes no 2 0.0022124 90.765 By MS/MS By matching 1 1 127950000 66821000 61127000 210 2841 237 582;583 601 601 5970;5971;5972;7855 1 AGLNCSTENMPIKINLIAPPR DAVKEALRAGLNCSTE INLIAPPRYVMTTTTL R A G P R Y 2 1 3 0 1 0 1 1 0 3 2 1 1 0 3 1 1 0 0 0 0 0 21 1 2308.2032 P05198;H0YJS4;G3V4T5 P05198 214 234 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 2 0.028039 52.5 By MS/MS 1 2377600 0 2377600 211 1640 238 584 602 602 0 AGLQFPVGR KAKTRSSRAGLQFPVG GLQFPVGRVHRLLRKG R A G G R V 1 1 0 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 9 0 943.52395 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;P20671;P0C0S8;Q16777;Q6FI13;Q93077;Q7L7L0;P04908;Q8IUE6;P16104;Q96QV6;C9J0D1;Q71UI9;P0C0S5 A0A0U1RR32 22 30 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST1H2AD;HIST1H2AG;HIST2H2AC;HIST2H2AA3;HIST1H2AC;HIST3H2A;HIST1H2AB;HIST2H2AB;H2AFX;HIST1H2AA;H2AFV;H2AFZ Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 2-B;Histone H2AX;Histone H2A type 1-A;Histone H2A;Histone H2A.V;Histone H2A.Z no no 2 0.0049072 138.83 By MS/MS By MS/MS 1 1 177240000 81034000 96201000 212 394;623 239 585;586 603;604 604 2 AGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGK VSKVSTNKAGLQTADK SGFGTTGKAPVGSVVS K A G G K A 6 0 2 3 0 3 0 8 0 1 3 2 0 2 0 2 3 0 1 0 0 0 36 1 3500.6808 P52594 P52594 319 354 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes yes 3 2.9223E-15 110.56 By MS/MS 1 50609000 0 50609000 213 1887 240 587 605 605 7483 1 AGLSPAEPLLSR RLAGPGCKAGLSPAEP PAEPLLSRAGFSPDSS K A G S R A 2 1 0 0 0 0 1 1 0 0 3 0 0 0 2 2 0 0 0 0 0 0 12 0 1209.6717 O95402;B8ZZF3 O95402 358 369 MED26 Mediator of RNA polymerase II transcription subunit 26 yes no 2 0.002523 86.699 By MS/MS By MS/MS 1 1 20616000 10979000 9637900 214 1595 241 588;589 606;607 607 3022 2 AGMSSNQSISSPVLDAVPR LSPDAVEKAGMSSNQS PVLDAVPRTPSRERSS K A G P R T 2 1 1 1 0 1 0 1 0 1 1 0 1 0 2 5 0 0 0 2 0 0 19 0 1914.9469 Q9UQ35 Q9UQ35 1394 1412 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 1.0449E-119 227.09 By MS/MS By MS/MS 6 8 487580000 237540000 250040000 215 3074 242;243;244;245;246 590;591;592;593;594;595;596;597;598;599;600;601;602;603 608;609;610;611;612;613;614;615;616;617;618;619;620;621;622;623;624;625;626 609 1220 6501;6502;6503;6504 19 AGMSSNQSISSPVLDAVPRTPSR LSPDAVEKAGMSSNQS AVPRTPSRERSSSASS K A G S R E 2 2 1 1 0 1 0 1 0 1 1 0 1 0 3 6 1 0 0 2 0 0 23 1 2356.1805 Q9UQ35 Q9UQ35 1394 1416 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 7.5776E-05 107.06 By MS/MS By MS/MS 4 4 320030000 151560000 168480000 216 3074 247;248;249;250 604;605;606;607;608;609;610;611 627;628;629;630;631;632;633;634;635;636 635 1220 6501;6502;6503;6504;7919 10 AGMSSNQSISSPVLDAVPRTPSRER LSPDAVEKAGMSSNQS PRTPSRERSSSASSPE K A G E R S 2 3 1 1 0 1 1 1 0 1 1 0 1 0 3 6 1 0 0 2 0 0 25 2 2641.3242 Q9UQ35 Q9UQ35 1394 1418 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0027521 61.139 By MS/MS 1 22669000 0 22669000 217 3074 251 612 637 637 1220 6501;6502;6503;6504;7919 1 AGNALTPELAPVQIK RVPRDGRRAGNALTPE ELAPVQIKVEEDFGFE R A G I K V 3 0 1 0 0 1 1 1 0 1 2 1 0 0 2 0 1 0 0 1 0 0 15 0 1520.8562 P0C1Z6 P0C1Z6 202 216 TFPT TCF3 fusion partner yes yes 2 4.6481E-26 165.89 By MS/MS By MS/MS 1 1 20064000 10225000 9838300 218 1667 252 613;614 638;639 638 7382 2 AGNQTGLYVLRCSPKDFNK FAISKLKKAGNQTGLY CSPKDFNKYFLTFAVE K A G N K Y 1 1 2 1 1 1 0 2 0 0 2 2 0 1 1 1 1 0 1 1 0 0 19 2 2167.0844 A0A1B0GTR9;O60674 A0A1B0GTR9 416 434 JAK2 Tyrosine-protein kinase JAK2 yes no 2 0.023707 59.116 By MS/MS 1 0 0 0 219 412 253 615 640 640 759 1 AGPCTWVLERPSLHSVATSASCQAGSTR ________________ SCQAGSTRSCFGVQTQ M A G T R S 4 2 0 0 2 1 1 2 1 0 2 0 0 0 2 5 3 1 0 2 0 0 28 1 2985.4185 H0YKV7;H0YNC4 H0YKV7 2 29 SEMA4B yes no 3 0.025096 41.672 By MS/MS By matching 1 1 13012000 6798600 6213500 220 1208 254 616;617 641 641 2251 1 AGPDLPSLPSHALEDEGWAAAAPSPGSAR PLARQEGKAGPDLPSL APSPGSARSMGSHTTR K A G A R S 7 1 0 2 0 0 2 3 1 0 3 0 0 0 5 4 0 1 0 0 0 0 29 0 2826.3573 Q9H3Q1 Q9H3Q1 269 297 CDC42EP4 Cdc42 effector protein 4 yes yes 3 0.00018444 66.956 By MS/MS 1 13563000 13563000 0 221 2828 255 618 642 642 5932 1 AGPEEPGDSPPLR ERLSDGGKAGPEEPGD PGDSPPLRHRPRGPPP K A G L R H 1 1 0 1 0 0 2 2 0 0 1 0 0 0 4 1 0 0 0 0 0 0 13 0 1320.631 A0A0A0MTG6;Q12770 A0A0A0MTG6 469 481 SCAP Sterol regulatory element-binding protein cleavage-activating protein yes no 2 1.1621E-09 135.43 By MS/MS By MS/MS 1 1 30040000 14689000 15351000 222 272 256 619;620 643;644;645 645 480 3 AGPTLTDENGDDLGLPPSPGDTSYYQDQVDDFHEAR KWAAVRAKAGPTLTDE VDDFHEARSRAALAKG K A G A R S 2 1 1 7 0 2 2 4 1 0 3 0 0 1 4 2 3 0 2 1 0 0 36 0 3891.6984 Q9NQZ2 Q9NQZ2 20 55 UTP3 Something about silencing protein 10 yes yes 3;4 0.0054045 47.304 By MS/MS By MS/MS 2 2 133380000 54343000 79040000 223 2902 257;258 621;622;623;624 646;647;648;649 648 6113;6114;7874 4 AGQDMGLEHGFEKPLDSAMSAEEDTDVR NTKSARERAGQDMGLE AEEDTDVRGRRKKKTP R A G V R G 3 1 0 4 0 1 4 3 1 0 2 1 2 1 1 2 1 0 0 1 0 0 28 1 3034.3284 Q99549;A0A0A0MT47 Q99549 300 327 MPHOSPH8 M-phase phosphoprotein 8 yes no 3 0.010882 51.398 By MS/MS By matching 1 1 17873000 8809100 9064400 224 2724 259 625;626 650 650 1082;1083 5651;5652 1 AGRTQWAQK A G Q K 2 1 0 0 0 2 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 9 1 1044.5465 REV__Q05BE5 yes no 2 0.012576 77.662 By MS/MS By matching 1 1 8317700 4452100 3865600 + 225 3190 260 627;628 651 651 7963 0 AGRTSLLTCVCATDRIIR A G I R 2 3 0 1 2 0 0 1 0 2 2 0 0 0 0 1 3 0 0 1 0 0 18 2 2062.0776 REV__P34130 yes yes 3 0.026111 58.98 By MS/MS By matching 2 1 66227000 47712000 18515000 + 226 3206 261 629;630;631 652 652 6804 1 AGSCCLSPGGR LVKEEGPRAGSCCLSP CCLSPGGRAELEGRDK R A G G R A 1 1 0 0 2 0 0 3 0 0 1 0 0 0 1 2 0 0 0 0 0 0 11 0 1120.4754 W0Z7M9;E7ER32;A0A087X287;Q969V6;B0QY83;A0A087WU73 W0Z7M9 540 550 mkl1;MKL1 MKL/myocardin-like protein 1 yes no 2 4.6432E-05 123.26 By MS/MS By MS/MS 1 1 37799000 21114000 16685000 227 3229 262 632;633 653;654;655 655 6825 3 AGSISTLDSLDFAR SGGGQLNRAGSISTLD LDSLDFARYSDDGNRE R A G A R Y 2 1 0 2 0 0 0 1 0 1 2 0 0 1 0 3 1 0 0 0 0 0 14 0 1451.7256 A0A075B785;Q9P260 A0A075B785 178 191 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 2 1.7959E-20 155.14 By MS/MS By MS/MS 1 1 27811000 17317000 10494000 228 20 263 634;635 656;657 656 38 2 AGSLKDPDVAELFFKDDPEK ________________ FFKDDPEKLFSDLREI R A G E K L 2 0 0 4 0 0 2 1 0 0 2 3 0 2 2 1 0 0 0 1 0 0 20 2 2220.095 Q9UL54 Q9UL54 7 26 TAOK2 Serine/threonine-protein kinase TAO2 yes yes 3 0.0013683 81.06 By matching By MS/MS 1 1 17854000 13460000 4393500 229 3035 264 636;637 658 658 6390 1 AGSLKDPEIAELFFK ________________ EIAELFFKEDPEKLFT R A G F K E 2 0 0 1 0 0 2 1 0 1 2 2 0 2 1 1 0 0 0 0 0 0 15 1 1663.8821 Q7L7X3;J3QS76 Q7L7X3 7 21 TAOK1 Serine/threonine-protein kinase TAO1 yes no 2 3.6977E-05 124.45 By MS/MS By MS/MS 1 1 12630000 8197600 4432600 230 2366 265 638;639 659;660 659 4796 2 AGSNEDPILAPSGTPPPTIPPDETFGGR LPGPENHRAGSNEDPI PDETFGGRVPRPAFVH R A G G R V 2 1 1 2 0 0 2 4 0 2 1 0 0 1 7 2 3 0 0 0 0 0 28 0 2789.3508 C9JFV4;Q8IZL8;E7EV54 C9JFV4 782 809 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 2;3 4.817E-10 94.73 By MS/MS By MS/MS 4 2 179270000 102960000 76306000 231 662 266 640;641;642;643;644;645 661;662;663;664;665;666;667;668;669;670;671;672 672 1227;7028 12 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAK AASLSNQKAGSSAAGA SPVTSAAKGIPGFGNT K A G A K G 8 0 3 1 0 2 0 5 1 0 1 1 0 0 3 10 3 1 0 2 0 0 41 0 3811.7634 A0A0A0MSJ0;Q86XP3 A0A0A0MSJ0 602 642 DDX42 ATP-dependent RNA helicase DDX42 yes no 3;4 5.4722E-09 71.709 By MS/MS By MS/MS 2 2 263000000 130680000 132320000 232 249 267 646;647;648;649 673;674;675 673 431;432;6902 3 AGSSGNSCITYQPSVSGEHK SGSSFSRRAGSSGNSC PSVSGEHKAQVTTKAE R A G H K A 1 0 1 0 1 1 1 3 1 1 0 1 0 0 1 5 1 0 1 1 0 0 20 0 2064.9171 A6PW57;Q99755 A6PW57 461 480 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha yes no 3 0.0027501 61.612 By MS/MS By matching 1 1 9315000 4410700 4904300 233 489 268 650;651 676 676 890;891 1 AGSSTPGDAPPAVAEVQGR AGSSEQPRAGSSTPGD AVAEVQGRSDGSGESA R A G G R S 4 1 0 1 0 1 1 3 0 0 0 0 0 0 3 2 1 0 0 2 0 0 19 0 1765.8595 Q7Z6Z7 Q7Z6Z7 2885 2903 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2;3 0.001142 83.891 By MS/MS By MS/MS 3 3 88586000 46106000 42479000 234 2394 269;270 652;653;654;655;656;657 677;678;679;680;681;682;683;684 684 4880;4881;7691 8 AGTATSPAGSSPAVAGGTQR VGTQAPRKAGTATSPA AVAGGTQRPAEDSSSS K A G Q R P 5 1 0 0 0 1 0 4 0 0 0 0 0 0 2 3 3 0 0 1 0 0 20 0 1742.8547 J3KQ96;E7ETY2;Q13428 J3KQ96 669 688 TCOF1 Treacle protein no no 2;3 0.0033339 68.411 By MS/MS By MS/MS 3 3 50485000 25375000 25110000 235 822;2059 271;272 658;659;660;661;662;663 685;686;687;688;689 689 1494;1495;1496;7086;7087 5 AGTDSPVSCASVTEER SESENEPKAGTDSPVS CASVTEERVASDSPKP K A G E R V 2 1 0 1 1 0 2 1 0 0 0 0 0 0 1 3 2 0 0 2 0 0 16 0 1664.7312 E9PEI0;Q69YH5 E9PEI0 691 706 CDCA2 Cell division cycle-associated protein 2 yes no 2 1.3523E-22 156.72 By MS/MS By MS/MS 1 1 32838000 14390000 18448000 236 856 273 664;665 690;691 691 1587 2 AGTGVDNVDLEAATR EKLQVVGRAGTGVDNV VDLEAATRKGILVMNT R A G T R K 3 1 1 2 0 0 1 2 0 0 1 0 0 0 0 0 2 0 0 2 0 0 15 0 1487.7216 Q5SZU1;O43175 Q5SZU1 42 56 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.00343 89.663 By matching By MS/MS 1 1 13181000 6329900 6851500 237 1489 274 666;667 692 692 1 AGVRPSSSGSAWEACSEAPSK TIKQESGRAGVRPSSS ACSEAPSKGSQDGVTW R A G S K G 4 1 0 0 1 0 2 2 0 0 0 1 0 0 2 6 0 1 0 1 0 0 21 1 2119.9593 Q12789 Q12789 839 859 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.019184 55.163 By MS/MS 1 3761300 3761300 0 238 2025 275 668 693 693 3932;3933;3934 0 AGVVNGTGAPGQSPGAGR QISVNNVKAGVVNGTG GQSPGAGRACESCYTT K A G G R A 3 1 1 0 0 1 0 6 0 0 0 0 0 0 2 1 1 0 0 2 0 0 18 0 1551.7754 H0Y4T7;E7ESY4;Q13330 H0Y4T7 166 183 MTA1 Metastasis-associated protein MTA1 yes no 2 0.00023154 119.08 By MS/MS By MS/MS 3 4 52762000 25364000 27398000 239 818 276;277 669;670;671;672;673;674;675 694;695;696;697;698;699 698 31 1481 6 AHFNAMFQPSSPTR HRMQLESRAHFNAMFQ FQPSSPTRRPGFSPTS R A H T R R 2 1 1 0 0 1 0 0 1 0 0 0 1 2 2 2 1 0 0 0 0 0 14 0 1589.7409 H0Y4Q6;Q8WUA4 H0Y4Q6 392 405 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2;3 1.4258E-54 200 By MS/MS By MS/MS 3 3 254290000 92569000 161720000 240 1120 278;279 676;677;678;679;680;681 700;701;702;703;704;705;706 705 408 2128;2129;7194 7 AHLGSSDNVATMSNEER LSLLPRKKAHLGSSDN ATMSNEERSDGGFPNS K A H E R S 2 1 2 1 0 0 2 1 1 0 1 0 1 0 0 3 1 0 0 1 0 0 17 0 1816.801 D6RB01;Q9Y6X4 D6RB01 462 478 FAM169A Soluble lamin-associated protein of 75 kDa yes no 2 0.00071098 90.379 By MS/MS By MS/MS 2 2 49371000 23427000 25944000 241 748 280;281 682;683;684;685 707;708;709;710 708 285 1361 4 AHLSENELEALEK QNLEIHRRAHLSENEL NELEALEKNDMEQMKY R A H E K N 2 0 1 0 0 0 4 0 1 0 3 1 0 0 0 1 0 0 0 0 0 0 13 0 1481.7362 A0A0A0MR66;P98175 A0A0A0MR66 859 871 RBM10 RNA-binding protein 10 yes no 2 0.014116 69.331 By MS/MS By matching 1 1 17383000 7569600 9813900 242 200 282 686;687 711;712 712 354 2 AHLSENELEALEKNDMEQMK QNLEIHRRAHLSENEL KNDMEQMKYRDRAAER R A H M K Y 2 0 2 1 0 1 5 0 1 0 3 2 2 0 0 1 0 0 0 0 0 0 20 1 2358.0832 A0A0A0MR66;P98175 A0A0A0MR66 859 878 RBM10 RNA-binding protein 10 yes no 3 0.015308 57.316 By MS/MS By matching 1 1 23915000 13624000 10291000 243 200 283 688;689 713 713 83;84 354 1 AHPPVTSAPLSPPQPNDLYK SLATSGVKAHPPVTSA PQPNDLYKNPTSSSEF K A H Y K N 2 0 1 1 0 1 0 0 1 0 2 1 0 0 6 2 1 0 1 1 0 0 20 0 2128.0953 Q4VCS5 Q4VCS5 190 209 AMOT Angiomotin yes yes 2;3 0.00011337 92.518 By MS/MS By MS/MS 2 2 111000000 59638000 51358000 244 2197 284 690;691;692;693 714;715;716;717;718;719;720;721 719 4385 8 AHPPVTSAPLSPPQPNDLYKNPTSSSEFYK SLATSGVKAHPPVTSA TSSSEFYKAQGPLPNQ K A H Y K A 2 0 2 1 0 1 1 0 1 0 2 2 0 1 7 5 2 0 2 1 0 0 30 1 3268.6041 Q4VCS5 Q4VCS5 190 219 AMOT Angiomotin yes yes 3;4 2.259E-07 82.831 By MS/MS By MS/MS 2 3 203590000 94656000 108940000 245 2197 285 694;695;696;697;698 722;723;724;725;726;727;728 723 4385 7 AHSPAEGASVESSSPGPK ________________ ESSSPGPKKSDMCEGC R A H P K K 3 0 0 0 0 0 2 2 1 0 0 1 0 0 3 5 0 0 0 1 0 0 18 0 1693.7907 C9J4C4;Q8NFG4 C9J4C4 7 24 FLCN Folliculin yes no 2 0.0045172 73.168 By matching By MS/MS 1 1 11738000 5129900 6608500 246 635 286 699;700 729 729 1187 1 AHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR ALTPQHVRAHSSPASL TPTAQHLRQSSFEIPD R A H L R Q 6 1 0 0 0 2 0 4 2 0 4 0 0 0 5 5 5 0 0 3 0 0 37 0 3533.859 P46937 P46937 125 161 YAP1 Transcriptional coactivator YAP1 yes yes 4 1.6714E-08 76.004 By MS/MS By MS/MS 1 1 32749000 15036000 17712000 247 1841 287 701;702 730;731;732;733 733 3526;3527 4 AHTPTPGIYMGR VDYSITKRAHTPTPGI TPGIYMGRPTHSGGGG R A H G R P 1 1 0 0 0 0 0 2 1 1 0 0 1 0 2 0 2 0 1 0 0 0 12 0 1299.6394 Q13595 Q13595 200 211 TRA2A Transformer-2 protein homolog alpha yes yes 3 0.0032012 68.132 By MS/MS 1 6305700 0 6305700 248 2069 288 703 734 734 827 7566 1 AIAELGIYPAVDPLDSTSR DATTVLSRAIAELGIY DPLDSTSRIMDPNIVG R A I S R I 3 1 0 2 0 0 1 1 0 2 2 0 0 0 2 2 1 0 1 1 0 0 19 0 1987.0262 H0YH81;P06576 H0YH81 325 343 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 2 0.00071476 113.54 By MS/MS By MS/MS 1 1 25404000 12412000 12991000 249 1184 289 704;705 735;736 736 2 AIEQADLLQEEDESPR TSKKSVLKAIEQADLL QEEDESPR________ K A I P R - 2 1 0 2 0 2 4 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 16 0 1841.8643 H7C1E4;P61966 H7C1E4 176 191 AP1S1 AP-1 complex subunit sigma-1A yes no 2 1.5066E-22 156 By MS/MS By MS/MS 1 1 8736500 4435000 4301500 250 1278 290 706;707 737;738;739 739 2367 3 AIGGIILTASHNPGGPNGDFGIK SCIIRKIKAIGGIILT PNGDFGIKFNISNGGP K A I I K F 2 0 2 1 0 0 0 6 1 4 1 1 0 1 2 1 1 0 0 0 0 0 23 0 2205.1542 P36871 P36871 108 130 PGM1 Phosphoglucomutase-1 yes yes 2;3 2.1182E-07 126.62 By MS/MS By MS/MS 6 6 491330000 241300000 250030000 251 1803 291;292 708;709;710;711;712;713;714;715;716;717;718;719 740;741;742;743;744;745;746;747;748;749 746 83 3408;7436 10 AIGNNSATSPR HHHPPKSRAIGNNSAT NNSATSPRVVVTQPNT R A I P R V 2 1 2 0 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 0 0 0 11 0 1086.5418 A0A1B0GV57;Q9NYJ8 A0A1B0GV57 158 168 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes no 2 0.00074986 96.067 By MS/MS By MS/MS 1 1 20784000 11264000 9519900 252 426 293 720;721 750;751 751 6955 1 AIIEKEYQPHVIVSTTGPNPFTTLTDR GELVTASKAIIEKEYQ PFTTLTDRELEEYRRE K A I D R E 1 1 1 1 0 1 2 1 1 3 1 1 0 1 3 1 5 0 1 2 0 0 27 1 3026.5713 P35611;E7EV99;E7ENY0;H0Y9H2 P35611 544 570 ADD1 Alpha-adducin yes no 3 0.00087742 68.309 By MS/MS By MS/MS 1 1 18464000 8619400 9845100 253 1799 294 722;723 752;753 753 8258 2 AILGSYDSELTPAEYSPQLTR ________________ EYSPQLTRRMREAEDM R A I T R R 2 1 0 1 0 1 2 1 0 1 3 0 0 0 2 3 2 0 2 0 0 0 21 0 2310.138 C9J9H5;C9JX80;C9JPS1;Q9Y6D9 C9J9H5 3 23 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 2;3 2.7148E-46 172.57 By MS/MS By MS/MS 2 2 100680000 51711000 48964000 254 647 295 724;725;726;727 754;755;756;757 755 1206 4 AILVDLEPGTMDSVR TGGKYVPRAILVDLEP PGTMDSVRSGPFGQIF R A I V R S 1 1 0 2 0 0 1 1 0 1 2 0 1 0 1 1 1 0 0 2 0 0 15 0 1614.8287 Q5JP53;P07437;Q9BVA1;Q13885;A0A0B4J269;Q13509;G3V5W4;G3V2R8;G3V3R4;G3V2N6 Q5JP53 45 59 TUBB;TUBB2B;TUBB2A;TUBB3 Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain yes no 2;3 0.0012905 111.52 By MS/MS By MS/MS 3 2 87017000 41971000 45047000 255 1653 296;297 728;729;730;731;732 758;759;760;761 761 604 4 AIPGDQHPESPVHTEPMGIQGR GPCLSPPRAIPGDQHP EPMGIQGRGRQTVDKV R A I G R G 1 1 0 1 0 2 2 3 2 2 0 0 1 0 4 1 1 0 0 1 0 0 22 0 2352.1281 Q14676 Q14676 784 805 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.00033816 76.237 By MS/MS By MS/MS 2 2 141100000 69412000 71692000 256 2098 298;299 733;734;735;736 762;763;764;765 763 834 4138 4 AIPQLQGYLR SQILPKIKAIPQLQGY PQLQGYLRSVFALTNG K A I L R S 1 1 0 0 0 2 0 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 10 0 1157.6557 Q02878 Q02878 263 272 RPL6 60S ribosomal protein L6 yes yes 2 0.032026 69.198 By MS/MS 1 5072900 5072900 0 257 1988 300 737 766 766 1 AIPTVNHSGTFSPQAPVPTTVPVVDVR TWGRLVRRAIPTVNHS TVPVVDVRIPQLAPPA R A I V R I 2 1 1 1 0 1 0 1 1 1 0 0 0 1 5 2 4 0 0 6 0 0 27 0 2785.4763 Q16513;B1AL79 Q16513 524 550 PKN2 Serine/threonine-protein kinase N2 yes no 3 0.00096615 60.834 By MS/MS By MS/MS 1 1 68245000 34896000 33349000 258 2163 301 738;739 767;768 768 4301;7607 2 AIPVSPSAVEEDEDEDGHTVVATAR NNISTVPKAIPVSPSA HTVVATARGIFNSNGG K A I A R G 4 1 0 3 0 0 4 1 1 1 0 0 0 0 2 2 2 0 0 4 0 0 25 0 2593.2144 A0A087X0K9;G5E9E7;G3V1L9;Q07157;H0Y3R8 A0A087X0K9 1521 1545 TJP1 Tight junction protein ZO-1 yes no 3 5.5616E-07 114.76 By MS/MS By MS/MS 1 1 74725000 37279000 37446000 259 156 302 740;741 769;770;771;772 772 250 4 AISAPTSPTR AVKRMYDRAISAPTSP SAPTSPTRLSHSGKRS R A I T R L 2 1 0 0 0 0 0 0 0 1 0 0 0 0 2 2 2 0 0 0 0 0 10 0 999.53491 B0QY95;Q9NQG6 B0QY95 53 62 MIEF1 Mitochondrial dynamics protein MID51 yes no 2 0.0028473 88.338 By MS/MS By MS/MS 2 2 127960000 75488000 52471000 260 514 303;304 742;743;744;745 773;774;775;776 774 971;972 4 AISETEENSDELSGER PSTSSRRRAISETEEN SDELSGERQRKRHKSD R A I E R Q 1 1 1 1 0 0 5 1 0 1 1 0 0 0 0 3 1 0 0 0 0 0 16 0 1764.765 E7EPE2;A7UKX8;A7UKY0;J3KN53;Q00987 E7EPE2 195 210 MDM2;mdm2 E3 ubiquitin-protein ligase Mdm2 yes no 2 1.0859E-11 144.18 By MS/MS By matching 1 1 12255000 7836600 4418200 261 492 305 746;747 777 777 894 1 AISSANLLVR PRQKLSRKAISSANLL SSANLLVRSGSTESRG K A I V R S 2 1 1 0 0 0 0 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1042.6135 G3V1D0;B7WPE2;H0Y3M3;Q32P44 G3V1D0 146 155 EML3 Echinoderm microtubule-associated protein-like 3 yes no 2 0.00048855 129 By MS/MS By MS/MS 1 1 14664000 8706700 5957800 262 586 306 748;749 778;779 778 1069 2 AISSDMFFGR RQKFAGAKAISSDMFF SSDMFFGREVDAEYEA K A I G R E 1 1 0 1 0 0 0 1 0 1 0 0 1 2 0 2 0 0 0 0 0 0 10 0 1129.5226 Q8N6H7;E9PMU9;H0YDN9;A0A0D9SF70;G5E9L0 Q8N6H7 430 439 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 2 4.3911E-05 133.91 By MS/MS By MS/MS 1 2 79225000 25150000 54075000 263 2479 307;308 750;751;752 780;781;782;783 783 1006 5068 4 AISTGSLASSTLNK VRGFNMGRAISTGSLA LASSTLNKLAVRPLSV R A I N K L 2 0 1 0 0 0 0 1 0 1 2 1 0 0 0 4 2 0 0 0 0 0 14 0 1348.7198 Q12923 Q12923 906 919 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.0006109 109.99 By MS/MS By MS/MS 3 3 85885000 40566000 45319000 264 2034 309;310 753;754;755;756;757;758 784;785;786;787;788;789 787 3981;3982 6 AISTPETPLTK PSKGSQKRAISTPETP TPETPLTKRSVSTRSP R A I T K R 1 0 0 0 0 0 1 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 11 0 1156.634 E9PIQ6;Q14181 E9PIQ6 84 94 POLA2 DNA polymerase alpha subunit B yes no 2 0.00105 113.22 By MS/MS By MS/MS 1 1 26091000 17162000 8929100 265 885 311 759;760 790;791 790 7116 2 AISTPETPLTKR PSKGSQKRAISTPETP PETPLTKRSVSTRSPH R A I K R S 1 1 0 0 0 0 1 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 12 1 1312.7351 E9PIQ6;Q14181 E9PIQ6 84 95 POLA2 DNA polymerase alpha subunit B yes no 2 0.021221 58.172 By MS/MS By matching 1 1 8191200 3196800 4994300 266 885 312 761;762 792 792 7116 0 AITGASLADIMAK RRAVKFQRAITGASLA SLADIMAKRNQKPEVR R A I A K R 4 0 0 1 0 0 0 1 0 2 1 1 1 0 0 1 1 0 0 0 0 0 13 0 1260.6748 C9JXB8;C9JNW5;P83731 C9JXB8 81 93 RPL24 60S ribosomal protein L24 yes no 2 3.7958E-06 125.84 By MS/MS By MS/MS 3 3 140820000 78194000 62622000 267 679 313;314;315 763;764;765;766;767;768 793;794;795;796;797 796 265 1255;7036 5 AITPPLPESTVPFSNGVLK TSSSPRDKAITPPLPE PFSNGVLKGELSDLGA K A I L K G 1 0 1 0 0 0 1 1 0 1 2 1 0 1 4 2 2 0 0 2 0 0 19 0 1966.0775 Q92667;I3NI36 Q92667 531 549 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.027518 63.691 By MS/MS 1 25982000 0 25982000 268 2594 316 769 798 798 7761 1 AITSLLGGGSPK ASTNARNKAITSLLGG LLGGGSPKNNTAAETE K A I P K N 1 0 0 0 0 0 0 3 0 1 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1099.6237 Q6KC79 Q6KC79 2649 2660 NIPBL Nipped-B-like protein yes yes 2 2.3306E-09 138.02 By MS/MS By MS/MS 1 1 330430000 186420000 144000000 269 2307 317 770;771 799;800 800 4650 2 AIVAIENPADVSVISSR EKLLLAARAIVAIENP DVSVISSRNTGQRAVL R A I S R N 3 1 1 1 0 0 1 0 0 3 0 0 0 0 1 3 0 0 0 3 0 0 17 0 1739.9418 F8WD59;C9J9K3;A0A0C4DG17;P08865 F8WD59 64 80 RPSA 40S ribosomal protein SA yes no 2 0.00062973 119.01 By matching By MS/MS 1 1 11903000 6166100 5737300 270 305 318 772;773 801 801 1 AIYSIVLK EDIGSETRAIYSIVLK AIYSIVLKLPGHSTIL R A I L K L 1 0 0 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 1 1 0 0 8 0 905.5586 P20309 P20309 363 370 CHRM3 Muscarinic acetylcholine receptor M3 yes yes 2 2.3275E-13 147.69 By MS/MS By MS/MS 1 1 7148000 7148000 0 271 1738 319 774;775 802;803 803 8241 2 AKEVELVSE KKKKKKKKAKEVELVS KEVELVSE________ K A K S E - 1 0 0 0 0 0 3 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 1 1002.5233 O60832 O60832 506 514 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 0.0023355 121.29 By matching By MS/MS 1 1 58635000 29478000 29157000 272 1530 320 776;777 804 804 2890 1 AKNSDLLTSPDVGLLK GSLKPHLRAKNSDLLT SPDVGLLKLASPELER R A K L K L 1 0 1 2 0 0 0 1 0 0 4 2 0 0 1 2 1 0 0 1 0 0 16 1 1669.9251 P05412 P05412 55 70 JUN Transcription factor AP-1 yes yes 2;3 3.3295E-62 191.97 By MS/MS By MS/MS 3 3 58758000 28321000 30437000 273 1642 321;322 778;779;780;781;782;783 805;806;807;808;809 805 3098;3099;7367 5 AKNWEDEDFYDSDDDTFLDR EAVSRKRKAKNWEDED DDDTFLDRTGLIEKKR K A K D R T 1 1 1 7 0 0 2 0 0 0 1 1 0 2 0 1 1 1 1 0 0 0 20 1 2495.0037 A0A087WWF4;A0A087X0M4;Q9BWU0 A0A087WWF4 225 244 SLC4A1AP Kanadaptin yes no 2;3 6.4016E-05 114.46 By MS/MS By MS/MS 2 2 47796000 28377000 19419000 274 88 323 784;785;786;787 810;811;812;813;814 813 156 5 AKPAMPQDSVPSPR DEVAPAKKAKPAMPQD QDSVPSPRSLQGKSTT K A K P R S 2 1 0 1 0 1 0 0 0 0 0 1 1 0 4 2 0 0 0 1 0 0 14 1 1479.7504 P53396 P53396 470 483 ACLY ATP-citrate synthase yes yes 2;3 0.003758 76.068 By MS/MS By MS/MS 4 4 104650000 55668000 48978000 275 1895 324;325 788;789;790;791;792;793;794;795 815;816;817;818;819;820;821 815 738 3670;3671 7 AKPEPDILEEEKIYAYPSNITSETGFR VKIRRFNKAKPEPDIL ITSETGFRTISSLEEI K A K F R T 2 1 1 1 0 0 5 1 0 3 1 2 0 1 3 2 2 0 2 0 0 0 27 2 3096.5292 Q8IY95 Q8IY95 200 226 TMEM192 Transmembrane protein 192 yes yes 3 0.020475 41.06 By matching By MS/MS 1 1 19371000 9483400 9887900 276 2441 326 796;797 822 822 8391 1 AKPVVSDDDSEEEQEEDR RRPSRGSRAKPVVSDD EEEQEEDRSGSGSEED R A K D R S 1 1 0 4 0 1 5 0 0 0 0 1 0 0 1 2 0 0 0 2 0 0 18 1 2075.8767 Q9HBD4;A0A0A0MT49;P51532 Q9HBD4 1654 1671 SMARCA4 Transcription activator BRG1 yes no 3 0.02402 48.198 By MS/MS 1 5505100 5505100 0 277 264 327 798 823 823 457;458 1 AKPVVSDFDSDEEQDER KKRPNRGKAKPVVSDF SDEEQDEREQSEGSGT K A K E R E 1 1 0 4 0 1 3 0 0 0 0 1 0 1 1 2 0 0 0 2 0 0 17 1 1964.8599 B1ALG1;F6T8Q0;B1ALG2;A0A0U1RR26;B4DNT1;B1ALF6;F6VDE0;P51531 B1ALG1 209 225 SMARCA2 Probable global transcription activator SNF2L2 yes no 2;3 0.0020825 117.23 By MS/MS By MS/MS 2 2 114390000 54660000 59733000 278 392 328 799;800;801;802 824;825;826 825 720;721 3 AKQDFLKTDSDSDLQLYK LEPDILLRAKQDFLKT DSDLQLYKEQGEGQGD R A K Y K E 1 0 0 4 0 2 0 0 0 0 3 3 0 1 0 2 1 0 1 0 0 0 18 2 2114.0532 H0Y360;Q01433;H0YCL9;E9PIJ1 H0Y360 152 169 AMPD2 AMP deaminase 2 yes no 3 0.008213 70.167 By MS/MS By matching 1 1 10331000 4790500 5540200 279 1114 329 803;804 827 827 2103;7190 0 AKSEDSDVELSD EVHEELAKAKSEDSDV DSDVELSD________ K A K S D - 1 0 0 3 0 0 2 0 0 0 1 1 0 0 0 3 0 0 0 1 0 0 12 1 1293.5572 Q5VZL5;H7C1I7 Q5VZL5 1537 1548 ZMYM4 Zinc finger MYM-type protein 4 yes no 2 0.011517 95.981 By matching By MS/MS 1 1 16723000 6000700 10722000 280 2283 330 805;806 828 828 4590;4591 1 AKSLDGVTNDR KSQPNIPKAKSLDGVT LDGVTNDRTASQGQWG K A K D R T 1 1 1 2 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 11 1 1174.5942 E9PRL8;E9PQ71;E9PIP9;E9PJ54;E9PM00;Q9UBM7 E9PRL8 12 22 DHCR7 7-dehydrocholesterol reductase yes no 2;3 0.00015956 120.6 By MS/MS By MS/MS 2 2 233920000 122860000 111060000 281 884 331 807;808;809;810 829;830;831;832 831 1640 4 AKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK IEENKYSRAKSPQPPV YNCDLHFKISRDRLSA R A K F K I 1 0 1 5 2 1 4 0 2 0 2 2 0 2 3 1 2 0 1 3 0 0 32 1 3833.6825 Q00839;Q5RI18 Q00839 269 300 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 3;4;5 9.8576E-12 99.873 By MS/MS By MS/MS 8 10 3536600000 1965800000 1570800000 282 1976 332;333 811;812;813;814;815;816;817;818;819;820;821;822;823;824;825;826;827;828 833;834;835;836;837;838;839;840;841;842;843;844;845;846;847;848;849;850;851;852;853;854;855;856;857;858;859;860 849 158 3785;7512 27 AKSPTPESSTIASYVTLR PVGVVPPRAKSPTPES IASYVTLRKTKKMMDL R A K L R K 2 1 0 0 0 0 1 0 0 1 1 1 0 0 2 4 3 0 1 1 0 0 18 1 1907 A0JP02;B4DJX4;Q9HAU0;H0YGJ6 A0JP02 611 628 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes no 3 7.2732E-07 130.09 By MS/MS By MS/MS 1 1 16543000 6277100 10266000 283 439 334 829;830 861;862;863 863 820 3 AKSRLITTTEQVK EILESPKKAKSRLITT ITTTEQVKFLCFLLSG K A K V K F 1 1 0 0 0 1 1 0 0 1 1 2 0 0 0 1 3 0 0 1 0 0 13 2 1473.8515 H0YAY0;H0YBT8 H0YAY0 233 245 TACC1 yes no 2 0.015826 61.353 By MS/MS 1 0 0 0 284 1159 335 831 864 864 2199;7208;7209;7210 1 AKTKTTK ________________ KAKTKTTKKRPQRATS K A K T K K 1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 3 0 0 0 0 0 7 2 776.4756 O14950 O14950 6 12 MYL12B Myosin regulatory light chain 12B yes yes 2 0.030934 57.532 By matching By MS/MS 1 1 4289000 2543600 1745400 285 1462 336 832;833 865 865 0 AKTQTPPVSPAPQPTEER RKLEEQARAKTQTPPV APQPTEERLPSSPVYE R A K E R L 2 1 0 0 0 2 2 0 0 0 0 1 0 0 5 1 3 0 0 1 0 0 18 1 1932.9905 Q14247;H0YEV2;H0YCD9 Q14247 397 414 CTTN Src substrate cortactin yes no 2 0.0015307 93.062 By MS/MS 1 43149000 43149000 0 286 2087 337 834 866 866 4119;7572;7573;7574 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK RKLEEQARAKTQTPPV YEDAASFKAELSYRGP R A K F K A 4 1 0 1 0 2 3 0 0 0 1 2 0 1 7 4 3 0 1 2 0 0 32 2 3424.7151 Q14247;H0YEV2;H0YCD9 Q14247 397 428 CTTN Src substrate cortactin yes no 3 0.00076611 57.041 By MS/MS By matching 1 1 56539000 24692000 31847000 287 2087 338 835;836 867 867 4119;4120;4121;7572;7573;7574;8337 1 ALAAAGYDVEK VSLAALKKALAAAGYD AAGYDVEKNNSRIKLG K A L E K N 4 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1106.5608 P10412;P16403;P16402;P22492;Q02539 P10412 65 75 HIST1H1E;HIST1H1C;HIST1H1D;HIST1H1T;HIST1H1A Histone H1.4;Histone H1.2;Histone H1.3;Histone H1t;Histone H1.1 yes no 1;2 0.0011294 112.11 By MS/MS By MS/MS 2 2 136810000 68206000 68603000 288 1674 339 837;838;839;840 868;869;870 868 3 ALAAGADSPKTEEARPSPAPGPGTPTGTPTR VAGVETSRALAAGADS TPTGTPTRTPSRTAPG R A L T R T 6 2 0 1 0 0 2 4 0 0 1 1 0 0 7 2 5 0 0 0 0 0 31 2 2957.4843 Q4KMP7 Q4KMP7 125 155 TBC1D10B TBC1 domain family member 10B yes yes 4 0.00040461 63.563 By MS/MS By MS/MS 1 1 15225000 7774900 7450500 289 2195 340 841;842 871;872;873 871 7620;7621 3 ALADDDFLTVTGK DMFEEALRALADDDFL DFLTVTGKTVRLL___ R A L G K T 2 0 0 3 0 0 0 1 0 0 2 1 0 1 0 0 2 0 0 1 0 0 13 0 1364.6824 P33991 P33991 846 858 MCM4 DNA replication licensing factor MCM4 yes yes 2 0.0020966 100.55 By MS/MS By MS/MS 1 1 8239500 3407300 4832200 290 1790 341 843;844 874;875 874 2 ALAEEASEEELPSDVDLNDPYFAEEVK KRLKRKQKALAEEASE PYFAEEVKQIGINKKS K A L V K Q 4 0 1 3 0 0 7 0 0 0 3 1 0 1 2 2 0 0 1 2 0 0 27 0 3008.3662 Q9H501 Q9H501 651 677 ESF1 ESF1 homolog yes yes 3 4.9313E-06 103.63 By MS/MS By MS/MS 1 1 124830000 58652000 66181000 291 2837 342 845;846 876;877 877 5955;5956 2 ALANSLACQGK AQEEYVKRALANSLAC NSLACQGKYTPSGQAG R A L G K Y 3 0 1 0 1 1 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1131.5706 J3KPS3;P04075;H3BR68 J3KPS3 336 346 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.013981 78.516 By MS/MS By matching 1 1 14694000 7396300 7298000 292 1327 343 847;848 878 878 1 ALASNTSFFSGCSPIEEEAH APGKKKKRALASNTSF SPIEEEAH________ R A L A H - 3 0 1 0 1 0 3 1 1 1 1 0 0 2 1 4 1 0 0 0 0 0 20 0 2152.9371 O95239;Q2VIQ3 O95239 1213 1232 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2;3 1.8951E-23 154.81 By MS/MS By MS/MS 2 2 78728000 35950000 42778000 293 1585 344 849;850;851;852 879;880;881;882 881 3001 4 ALDEGDIALLK EKDDKPIRALDEGDIA EGDIALLKTYGQSTYS R A L L K T 2 0 0 2 0 0 1 1 0 1 3 1 0 0 0 0 0 0 0 0 0 0 11 0 1156.634 C9JLS9;P35998 C9JLS9 24 34 PSMC2 26S protease regulatory subunit 7 yes no 2 0.0021999 106.6 By MS/MS 1 2235300 0 2235300 294 673 345 853 883 883 1 ALDFTDSQENEEK FQKKETKRALDFTDSQ DSQENEEKASEYRASE R A L E K A 1 0 1 2 0 1 3 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 13 0 1524.658 O94782;C9JWX4;C9JC88 O94782 36 48 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes no 2 0.0010909 103.11 By MS/MS By MS/MS 1 1 13788000 6699500 7088100 295 1566 346 854;855 884;885 885 2961 2 ALDIDSDEESEPK LYQNYKEKALDIDSDE SDEESEPKEQKSDEKI K A L P K E 1 0 0 3 0 0 3 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 13 0 1446.6362 Q96DR7 Q96DR7 387 399 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 0.0013224 92.457 By MS/MS By MS/MS 1 1 70695000 32637000 38058000 296 2637 347 856;857 886;887 887 5430 2 ALDISLSSGEEDEGDEEDSTAGTTK KKLKEQAKALDISLSS DSTAGTTKQPSKEEEE K A L T K Q 2 0 0 4 0 0 5 3 0 1 2 1 0 0 0 4 3 0 0 0 0 0 25 0 2555.0882 Q8IY81 Q8IY81 329 353 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.0039892 73.208 By MS/MS 1 0 0 0 297 2438 348 858 888 888 4983;4984 1 ALEAASLSQHPPSLCISDSEEEEEER RQLLATLRALEAASLS SEEEEEERKKKCPKKA R A L E R K 3 1 0 1 1 1 7 0 1 1 3 0 0 0 2 5 0 0 0 0 0 0 26 0 2912.2982 E9PPY3;O43159 E9PPY3 46 71 RRP8 Ribosomal RNA-processing protein 8 yes no 3 0.012128 62.735 By MS/MS By MS/MS 1 1 56970000 31943000 25027000 298 925 349 859;860 889;890 889 1724;1725;1726 2 ALEEGDGSVSGSSPR ERKKAELRALEEGDGS SVSGSSPRSDISQPAS R A L P R S 1 1 0 1 0 0 2 3 0 0 1 0 0 0 1 4 0 0 0 1 0 0 15 0 1446.6587 Q8N3X1 Q8N3X1 420 434 FNBP4 Formin-binding protein 4 yes yes 2 0.00067809 102.72 By MS/MS By MS/MS 1 1 40774000 21551000 19223000 299 2469 350 861;862 891;892 892 5045 2 ALEIIPR LLIGAYAKALEIIPRQ KALEIIPRQLCDNAGF K A L P R Q 1 1 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 7 0 810.49634 Q99832 Q99832 441 447 CCT7 T-complex protein 1 subunit eta yes yes 2 0.00048068 128.75 By MS/MS 1 0 0 0 300 2734 351 863 893 893 1 ALEISPR SDPLEEKKALEISPRS KALEISPRSCELFSII K A L P R S 1 1 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 7 0 784.4443 Q8IY92 Q8IY92 1181 1187 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2 0.0091739 115.71 By MS/MS By MS/MS 1 1 11717000 5513600 6203500 301 2440 352 864;865 894;895 895 4990 2 ALELPLAASSIPRPRTPSPESHR PIPAGEEKALELPLAA TPSPESHRSPAEGSER K A L H R S 3 3 0 0 0 0 2 0 1 1 3 0 0 0 5 4 1 0 0 0 0 0 23 2 2481.3452 Q66K74 Q66K74 623 645 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3;4 0.0064174 59.154 By MS/MS By MS/MS 2 1 67444000 38906000 28538000 302 2289 353 866;867;868 896;897 897 4603;4604 2 ALENDFFNSPPR RTGISNMRALENDFFN DFFNSPPRKTVRFGGT R A L P R K 1 1 2 1 0 0 1 0 0 0 1 0 0 2 2 1 0 0 0 0 0 0 12 0 1405.6626 F5H148;H3BMT1;A6NIE6;Q9NYV6 F5H148 36 47 RRN3;RRN3P2 Putative RRN3-like protein RRN3P2;RNA polymerase I-specific transcription initiation factor RRN3 yes no 2 1.3229E-06 130.2 By MS/MS By MS/MS 1 1 8353100 4215800 4137300 303 472 354 869;870 898;899 899 865 2 ALESPERPFLAILGGAK KELNYFAKALESPERP LAILGGAKVADKIQLI K A L A K V 3 1 0 0 0 0 2 2 0 1 3 1 0 1 2 1 0 0 0 0 0 0 17 1 1767.9883 P00558 P00558 200 216 PGK1 Phosphoglycerate kinase 1 yes yes 2;3 2.7052E-23 157.42 By MS/MS By MS/MS 2 2 59607000 32314000 27294000 304 1626 355 871;872;873;874 900;901;902;903;904 904 3068 5 ALEVAEYLTPVLK VINTVKGKALEVAEYL EYLTPVLKESKFKETG K A L L K E 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 0 1 0 1 2 0 0 13 0 1444.8177 F8WDI0;Q9NT62 F8WDI0 12 24 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes no 2 1.5916E-71 213.8 By MS/MS By matching 1 1 47740000 25617000 22123000 305 1054 356 875;876 905 905 8142 1 ALEVNMSLSGRYLEELSQR MRLNNRIKALEVNMSL YLEELSQRYRKQMEEM K A L Q R Y 1 2 1 0 0 1 3 1 0 0 4 0 1 0 0 3 0 0 1 1 0 0 19 1 2194.1052 A0A087WV04;Q9UBS9 A0A087WV04 361 379 SUCO SUN domain-containing ossification factor yes no 2 0.032114 43.598 By MS/MS 1 0 0 0 306 68 357 877 906 906 25 1 ALFKPPEDSQDDESDSDAEEEQTTK EGSVDEAKALFKPPED AEEEQTTKRRRPTLGV K A L T K R 2 0 0 5 0 2 5 0 0 0 1 2 0 1 2 3 2 0 0 0 0 0 25 1 2810.189 H7C072;Q13769 H7C072 170 194 THOC5 THO complex subunit 5 homolog yes no 3 5.5193E-05 97.152 By MS/MS 1 0 0 0 307 1269 358 878 907 907 2354;2355 1 ALGERVSIL ETEETEMKALGERVSI LGERVSIL________ K A L I L - 1 1 0 0 0 0 1 1 0 1 2 0 0 0 0 1 0 0 0 1 0 0 9 1 956.56548 Q15139;F8WBA3 Q15139 904 912 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 2 0.011277 84.821 By MS/MS By matching 1 1 33865000 18841000 15024000 308 2129 359 879;880 908 908 4206 1 ALGEVFESLAASPSPK A L P K 3 0 0 0 0 0 2 1 0 0 2 1 0 1 2 3 0 0 0 1 0 0 16 0 1601.8301 REV__H0YGQ4 yes no 2 0.0075396 69.045 By MS/MS 1 5212400 5212400 0 + 309 3159 360 881 909 909 6757;6758 1 ALGLSTDDAYEELR SLTDTVNKALGLSTDD DDAYEELRQKHEYELN K A L L R Q 2 1 0 2 0 0 2 1 0 0 3 0 0 0 0 1 1 0 1 0 0 0 14 0 1551.7417 Q9UK61;A0A087X0F1 Q9UK61 796 809 FAM208A Protein FAM208A yes no 2 0.0017787 111.5 By MS/MS 1 7046400 0 7046400 310 3019 361 882 910 910 8496 1 ALIEMEK YEYAMRWKALIEMEKQ KALIEMEKQQQDQVDR K A L E K Q 1 0 0 0 0 0 2 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 7 0 832.43644 Q15233;H7C367;C9JYS8 Q15233 273 279 NONO Non-POU domain-containing octamer-binding protein yes no 2 0.019409 97.068 By MS/MS 1 0 0 0 311 2131 362 883 911 911 1 ALINSMDQNMFR PRLSFADRALINSMDQ SMDQNMFRNFSFMNPG R A L F R N 1 1 2 1 0 1 0 0 0 1 1 0 2 1 0 1 0 0 0 0 0 0 12 0 1438.6697 A0A087X0I9;Q04759 A0A087X0I9 645 656 PRKCQ Protein kinase C;Protein kinase C theta type yes no 2 0.0005616 91.549 By MS/MS By MS/MS 1 1 15499000 9013800 6485500 312 155 363 884;885 912;913 913 59;60 249 0 ALIQTCLNSPDSPPRSDPTTDQR MITSETGKALIQTCLN SDPTTDQRMSATGFEE K A L Q R M 1 2 1 3 1 2 0 0 0 1 2 0 0 0 4 3 3 0 0 0 0 0 23 1 2568.2238 P11831 P11831 213 235 SRF Serum response factor yes yes 3 0.019689 56.304 By MS/MS By matching 1 1 45944000 26691000 19253000 313 1684 364 886;887 914 914 3182 0 ALLEVVQSGGK EAIKLAIKALLEVVQS EVVQSGGKNIELAIIR K A L G K N 1 0 0 0 0 1 1 2 0 0 2 1 0 0 0 1 0 0 0 2 0 0 11 0 1099.6237 A0A087WYS6;Q8TAA3;O14818 A0A087WYS6 170 180 PSMA8;PSMA7 Proteasome subunit alpha type-7-like;Proteasome subunit alpha type-7 yes no 2 0.022175 73.985 By MS/MS 1 1751800 0 1751800 314 127 365 888 915 915 1 ALLLLCGEDD DTSGDYKKALLLLCGE LLLCGEDD________ K A L D D - 1 0 0 2 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 10 0 1117.5325 D6RBE9;D6RBL5;P08758 D6RBE9 211 220 ANXA5 Annexin;Annexin A5 yes no 1;2 2.2369E-24 185.42 By MS/MS By MS/MS 2 2 27989000 15767000 12222000 315 751 366 889;890;891;892 916;917;918 916 2 ALMDEVVK EAFARGTKALMDEVVK ALMDEVVKATSRGCIT K A L V K A 1 0 0 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 8 0 903.47355 P00558 P00558 354 361 PGK1 Phosphoglycerate kinase 1 yes yes 2 0.029057 79.469 By MS/MS 1 1385700 0 1385700 316 1626 367 893 919 919 1 ALNGAEPNYHSLPSAR DPSSPPTKALNGAEPN YHSLPSARTDEQALLS K A L A R T 3 1 2 0 0 0 1 1 1 0 2 0 0 0 2 2 0 0 1 0 0 0 16 0 1695.8329 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 32 47 LAMTOR1 Ragulator complex protein LAMTOR1 yes no 3 0.017175 54.974 By MS/MS By MS/MS 1 1 6626700 6626700 0 317 943 368 894;895 920;921 920 1769 2 ALPAVQQNNLDEDLIR LAQAVNARALPAVQQN NLDEDLIRKLAYVAAG R A L I R K 2 1 2 2 0 2 1 0 0 1 3 0 0 0 1 0 0 0 0 1 0 0 16 0 1807.9428 P22314 P22314 369 384 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 2 0.0023599 92.792 By MS/MS By MS/MS 1 1 13598000 6308900 7288900 318 1747 369 896;897 922;923 923 2 ALPFWNEEIVPQIK SLKDTIARALPFWNEE EEIVPQIKEGKRVLIA R A L I K E 1 0 1 0 0 1 2 0 0 2 1 1 0 1 2 0 0 1 0 1 0 0 14 0 1682.9032 P18669;Q8N0Y7;P15259 P18669 163 176 PGAM1;PGAM4;PGAM2 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4;Phosphoglycerate mutase 2 yes no 2 0.0026517 92.611 By MS/MS By MS/MS 1 1 6228300 2995700 3232600 319 1728 370 898;899 924;925 924 2 ALPLPQSSTC NGGRKNERALPLPQSS PLPQSSTC________ R A L T C - 1 0 0 0 1 1 0 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 10 0 1072.5223 C9J5X1;P08069 C9J5X1 1357 1366 IGF1R Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain yes no 2 0.01075 84.817 By MS/MS By MS/MS 1 1 11338000 6483400 4854900 320 641 371 900;901 926;927 926 7017 2 ALPNNTSSSPQPK LPPGSTKRALPNNTSS TSSSPQPKKKPLDGEY R A L P K K 1 0 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 13 0 1339.6732 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 148 160 TP53 Cellular tumor antigen p53 yes no 2 0.00082618 99.161 By MS/MS By MS/MS 3 3 391100000 349710000 41390000 321 147 372;373 902;903;904;905;906;907 928;929;930;931;932;933;934;935;936 930 5;6 241;242;243;6866 9 ALPQTPRPR CDSSPEPKALPQTPRP LPQTPRPRSRSPSSPE K A L P R S 1 2 0 0 0 1 0 0 0 0 1 0 0 0 3 0 1 0 0 0 0 0 9 1 1034.5985 Q9UQ35 Q9UQ35 1488 1496 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0046571 78.342 By MS/MS By MS/MS 1 1 92926000 47666000 45260000 322 3074 374 908;909 937;938 938 7920 2 ALPSLNTGSSSPR QTSCNPSRALPSLNTG NTGSSSPRGVEEPDVI R A L P R G 1 1 1 0 0 0 0 1 0 0 2 0 0 0 2 4 1 0 0 0 0 0 13 0 1285.6626 O14545 O14545 317 329 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2;3 1.3093E-06 127.3 By MS/MS By MS/MS 1 2 488700000 247980000 240720000 323 1449 375 910;911;912 939;940;941 940 2670;2671 3 ALPTSKPEGSLHSSPVGPSSSK PSDPRLARALPTSKPE PVGPSSSKGSGPPPTE R A L S K G 1 0 0 0 0 0 1 2 1 0 2 2 0 0 4 7 1 0 0 1 0 0 22 1 2149.1015 Q9UPT8;M0QY97 Q9UPT8 895 916 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 3 0.0083818 53.454 By MS/MS By MS/MS 1 1 46402000 24216000 22186000 324 3068 376 913;914 942;943 942 6485;6486 2 ALQASALK ALTFSYGRALQASALK ALQASALKAWGGKKEN R A L L K A 3 0 0 0 0 1 0 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 8 0 800.4756 J3KPS3;P04075;H3BQN4;H3BR68 J3KPS3 309 316 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0084244 123.69 By MS/MS By MS/MS 1 1 11802000 5374500 6427400 325 1327 377 915;916 944;945 945 2 ALQLSNSPGASSAFLK SADCAKDKALQLSNSP GASSAFLKAETEHNKE K A L L K A 3 0 1 0 0 1 0 1 0 0 3 1 0 1 1 4 0 0 0 0 0 0 16 0 1589.8413 Q12802;H0YMW2 Q12802 977 992 AKAP13 A-kinase anchor protein 13 yes no 2 1.7347E-07 133.87 By MS/MS By MS/MS 1 1 34516000 18593000 15923000 326 2026 378 917;918 946;947 946 3939 2 ALRPPTSPGVFGALQNFK NKKLLGSKALRPPTSP FGALQNFKEDKPKPVR K A L F K E 2 1 1 0 0 1 0 2 0 0 2 1 0 2 3 1 1 0 0 1 0 0 18 1 1899.0367 O75151 O75151 649 666 PHF2 Lysine-specific demethylase PHF2 yes yes 3 0.00014865 102.72 By MS/MS By MS/MS 1 1 53669000 28122000 25548000 327 1537 379 919;920 948;949;950 948 2900;7335 3 ALSASHTDLAH NNCLADSRALSASHTD ASHTDLAH________ R A L A H - 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1121.5465 H0YJK1;H0YG16 H0YJK1 34 44 KLC1 yes no 2;3 4.8557E-05 123.11 By MS/MS By MS/MS 2 2 169210000 97502000 71706000 328 1180 380 921;922;923;924 951;952;953;954 953 2222 4 ALSGTSPDDVQPGPSVGPPSK PLNPFTAKALSGTSPD PSVGPPSKDKDKVLPS K A L S K D 1 0 0 2 0 1 0 3 0 0 1 1 0 0 5 4 1 0 0 2 0 0 21 0 1991.98 A0A075B797;M0R3B2;Q9Y314 A0A075B797 113 133 NOSIP Nitric oxide synthase-interacting protein yes no 2 0.0083331 62.377 By matching By MS/MS 1 1 17899000 8409800 9488800 329 22 381 925;926 955 955 43 1 ALSKPGTAAELR AETRKFTRALSKPGTA PGTAAELRQSVSEVVR R A L L R Q 3 1 0 0 0 0 1 1 0 0 2 1 0 0 1 1 1 0 0 0 0 0 12 1 1212.6826 Q9BZ29;A0A0D9SF41;A0A0A0MT38 Q9BZ29 19 30 DOCK9 Dedicator of cytokinesis protein 9 yes no 3 0.021723 66.674 By MS/MS 1 0 0 0 330 2781 382 927 956 956 1 ALSLGTIPSLTR XLPGRLSRALSLGTIP GTIPSLTRADSGYLFS R A L T R A 1 1 0 0 0 0 0 1 0 1 3 0 0 0 1 2 2 0 0 0 0 0 12 0 1227.7187 H0Y994;H0Y4R5;Q5SNT2 H0Y994 9 20 TMEM201 Transmembrane protein 201 yes no 2 2.1901E-09 138.42 By MS/MS By MS/MS 1 1 38833000 22187000 16646000 331 1122 383 928;929 957;958 958 2132 2 ALSPAELR PEPPAPERALSPAELR ALSPAELRALEAEKRA R A L L R A 2 1 0 0 0 0 1 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 8 0 855.48142 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YCG0 A0A0G2JNZ2 1484 1491 SCRIB Protein scribble homolog yes no 2 0.010776 89.047 By MS/MS By matching 1 1 21186000 11021000 10165000 332 361 384 930;931 959 959 648 1 ALSPGLEESGLGLLAR YRLGARERALSPGLEE SGLGLLARFAASALPS R A L A R F 2 1 0 0 0 0 2 3 0 0 5 0 0 0 1 2 0 0 0 0 0 0 16 0 1581.8726 H9KVB4;O15417 H9KVB4 1855 1870 TNRC18 Trinucleotide repeat-containing gene 18 protein yes no 2 1.7068E-22 155.06 By MS/MS By matching 1 1 46067000 30028000 16038000 333 1296 385 932;933 960 960 2400 1 ALSPVIPLIPR GRWEQEDRALSPVIPL PVIPLIPRASIPVFPD R A L P R A 1 1 0 0 0 0 0 0 0 2 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1174.7438 O14686 O14686 4736 4746 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.00047966 112.64 By MS/MS By MS/MS 1 1 68076000 46104000 21972000 334 1454 386 934;935 961;962 961 2691 2 ALSQLALR TTAQEMEKALSQLALR ALSQLALRSAAPSSPG K A L L R S 2 1 0 0 0 1 0 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 8 0 870.5287 H3BSY1;Q9H211 H3BSY1 123 130 CDT1 DNA replication factor Cdt1 yes no 2 0.017776 96.665 By MS/MS 1 0 0 0 335 1253 387 936 963 963 2333 1 ALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWR VLQAPQPKALSQTVPS SPDTAAWRSPSEAADE K A L W R S 7 1 1 2 1 1 0 3 0 0 2 0 0 0 4 5 4 1 0 3 0 0 35 0 3411.6365 B7Z7F3;Q9H6Z4;K7EN31 B7Z7F3 116 150 RANBP3 Ran-binding protein 3 yes no 3 0.021997 40.668 By MS/MS 1 8529000 8529000 0 336 591 388 937 964 964 1075 1 ALSRQEMQEVQSSR GHNAEVRKALSRQEMQ MQEVQSSRSGRGGNFG K A L S R S 1 2 0 0 0 3 2 0 0 0 1 0 1 0 0 3 0 0 0 1 0 0 14 1 1647.7999 P22626 P22626 187 200 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2 0.031622 48.44 By MS/MS 1 0 0 0 337 1749 389 938 965 965 1 ALSRTSQVPWLETSASEWHPQWPQMSQSR PTQGQGDRALSRTSQV WPQMSQSRACGGSEQI R A L S R A 2 2 0 0 0 4 2 0 1 0 2 0 1 0 3 6 2 3 0 1 0 0 29 1 3409.6262 B1AKV6 B1AKV6 37 65 UQCC1 yes yes 3 0.019305 43.728 By matching By MS/MS 1 1 15024000 8043100 6981200 338 525 390 939;940 966 966 986 1 ALSSAGPIPIRPPIVPVK STKPTVRRALSSAGPI RPPIVPVKTPTVPDSP R A L V K T 2 1 0 0 0 0 0 1 0 3 1 1 0 0 5 2 0 0 0 2 0 0 18 1 1811.1033 A0A087WXN9;Q765P7 A0A087WXN9 576 593 MTSS1L MTSS1-like protein yes no 3 0.0052455 61.757 By MS/MS 1 1993600 1993600 0 339 112 391 941 967 967 194 1 ALSSAVQASPTSPGGSPSSPSSGQR SMGLEQNKALSSAVQA SSPSSGQRSASPSVPG K A L Q R S 3 1 0 0 0 2 0 3 0 0 1 0 0 0 4 9 1 0 0 1 0 0 25 0 2299.104 Q03164 Q03164 3500 3524 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 2;3 3.6448E-05 79.471 By MS/MS By MS/MS 2 2 45209000 23876000 21333000 340 1994 392 942;943;944;945 968;969 969 3835;3836 2 ALSSGGSITSPPLSPALPK NFGPEWLRALSSGGSI PLSPALPKYKLADYRY R A L P K Y 2 0 0 0 0 0 0 2 0 1 3 1 0 0 4 5 1 0 0 0 0 0 19 0 1778.9778 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2 I1E4Y6 17 35 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2;3 3.3462E-102 210.39 By MS/MS By MS/MS 6 7 419140000 215770000 203370000 341 1298 393;394;395 946;947;948;949;950;951;952;953;954;955;956;957;958 970;971;972;973;974;975;976;977;978;979;980;981;982;983;984 981 2404;2405;2406;2407;2408;7239 12 ALSSLHGDDQDSEDEVLTIPEVK HITTKSVKALSSLHGD VLTIPEVKVHSGRGAG K A L V K V 1 0 0 4 0 1 3 1 1 1 3 1 0 0 1 3 1 0 0 2 0 0 23 0 2496.1868 P11717 P11717 2398 2420 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2;3 2.3931E-26 158.47 By MS/MS By MS/MS 3 3 245970000 119260000 126720000 342 1683 396;397 959;960;961;962;963;964 985;986;987;988;989;990 986 3177;3178;3179 6 ALTDDSDENEEEDAFTDQK MKLPPPYKALTDDSDE EDAFTDQKIRQRYADL K A L Q K I 2 0 1 5 0 1 4 0 0 0 1 1 0 1 0 1 2 0 0 0 0 0 19 0 2170.8662 Q8NI35;A0A0U1RRD7;A0A0U1RQW4 Q8NI35 1207 1225 INADL InaD-like protein yes no 2 1.9537E-32 164.97 By MS/MS By MS/MS 1 1 39281000 16067000 23215000 343 2528 398 965;966 991;992 992 5163 2 ALTQPSPVSTPSSVQFFLQEDDSADR ASEAEGARALTQPSPV QEDDSADRKAERTSPS R A L D R K 2 1 0 3 0 3 1 0 0 0 2 0 0 2 3 5 2 0 0 2 0 0 26 0 2821.3406 P04920;C9J9M9 P04920 139 164 SLC4A2 Anion exchange protein 2 yes no 3 0.0014656 59.55 By MS/MS 1 8096000 0 8096000 344 1636 399 967 993 993 3087;3088;7366 1 ALTSFLPAPTQLSQDQLEAEEK ________________ DQLEAEEKARSQRSRQ M A L E K A 3 0 0 1 0 3 3 0 0 0 4 1 0 1 2 2 2 0 0 0 0 0 22 0 2415.2169 G3V3A4;Q13573;G3V5R3 G3V3A4 2 23 SNW1 SNW domain-containing protein 1 yes no 2 0.0051977 69.456 By MS/MS 1 0 0 0 345 1072 400 968 994 994 2030;7172 1 ALTVPELTQQVFDAK SRGSQQYRALTVPELT TQQVFDAKNMMAACDP R A L A K N 2 0 0 1 0 2 1 0 0 0 2 1 0 1 1 0 2 0 0 2 0 0 15 0 1658.8879 Q5JP53;P07437;Q5ST81 Q5JP53 265 279 TUBB Tubulin beta chain yes no 2 1.5236E-06 127.52 By MS/MS By matching 1 1 28965000 15678000 13287000 346 1653 401 969;970 995 995 1 ALVATPGKK KKGATPGKALVATPGK LVATPGKKGAAIPAKG K A L K K G 2 0 0 0 0 0 0 1 0 0 1 2 0 0 1 0 1 0 0 1 0 0 9 1 883.5491 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 117 125 NCL Nucleolin yes no 2 0.019577 95.483 By MS/MS By MS/MS 1 1 307520000 182630000 124880000 347 1732 402 971;972 996;997 996 2 ALVEFESNPEETREPGSPPSVQR TSVSRTRRALVEFESN GSPPSVQRAGLGSPER R A L Q R A 1 2 1 0 0 1 5 1 0 0 1 0 0 1 4 3 1 0 0 2 0 0 23 1 2554.23 Q9H6F5;H0YG79 Q9H6F5 31 53 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 0.00042672 74.505 By MS/MS By MS/MS 1 1 596910000 291920000 304980000 348 2841 403 973;974 998;999;1000;1001;1002 1000 5973;7856 5 ALVHQLSNESR ENSRDENRALVHQLSN HQLSNESRLSITDSLS R A L S R L 1 1 1 0 0 1 1 0 1 0 2 0 0 0 0 2 0 0 0 1 0 0 11 0 1252.6524 Q9H4L5 Q9H4L5 431 441 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 2 0.0024418 87.831 By MS/MS By matching 1 1 53828000 30324000 23504000 349 2833 404 975;976 1003 1003 5939 1 ALVLDCHYPEDEVGQEDEAESDIFSIR IKNDDGKKALVLDCHY ESDIFSIREVSFQSTG K A L I R E 2 1 0 4 1 1 5 1 1 2 2 0 0 1 1 2 0 0 1 2 0 0 27 0 3135.3979 Q07021;I3L3Q7;I3L3B0 Q07021 181 207 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 3 3.5607E-30 157.2 By MS/MS By MS/MS 1 1 50275000 29377000 20898000 350 2009 405 977;978 1004;1005 1004 3874 2 ALVVPEPEPDSDSNQER GDLLTERKALVVPEPE DSDSNQERKDDRERGE K A L E R K 1 1 1 2 0 1 3 0 0 0 1 0 0 0 3 2 0 0 0 2 0 0 17 0 1880.8752 Q5VTR2;C9J0A5;C9JXC9 Q5VTR2 126 142 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 2;3 1.6807E-06 129.36 By MS/MS By MS/MS 3 3 284880000 140050000 144830000 351 2266 406;407 979;980;981;982;983;984 1006;1007;1008;1009;1010;1011 1006 4548;4549 6 AMECFTPVYTSSSLPGIHKPCRASGPPSR WEPSCQARAMECFTPV RASGPPSRILVKICTI R A M S R I 2 2 0 0 2 0 1 2 1 1 1 1 1 1 5 5 2 0 1 1 0 0 29 2 3189.5158 CON__A2VCT4 CON__A2VCT4 419 447 yes yes 3 0.027725 48.204 By MS/MS 1 0 0 0 + 352 709 408 985 1012 1012 1314;1315;1316 1 AMELVTINYSSDLK IQRENLQKAMELVTIN INYSSDLKNLILYLLT K A M L K N 1 0 1 1 0 0 1 0 0 1 2 1 1 0 0 2 1 0 1 1 0 0 14 0 1582.7913 A0A0C4DFZ9;Q58A45 A0A0C4DFZ9 513 526 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 yes no 2 0.030066 45.54 By MS/MS 1 0 0 0 353 303 409 986 1013 1013 118 1 AMESTESRHYPVFENPK FDKSCSDRAMESTESR YPVFENPKQGKLRTKV R A M P K Q 1 1 1 0 0 0 3 0 1 0 0 1 1 1 2 2 1 0 1 1 0 0 17 1 2020.9313 P55265;H0YCK3 P55265 980 996 ADAR Double-stranded RNA-specific adenosine deaminase yes no 2 0.01189 71.888 By MS/MS 1 0 0 0 354 1913 410 987 1014 1014 746 3699;7493;8301 1 AMGIMNSFVNDIFER PDTGISSKAMGIMNSF FVNDIFERIASEASRL K A M E R I 1 1 2 1 0 0 1 1 0 2 0 0 2 2 0 1 0 0 0 1 0 0 15 0 1742.812 U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899 Q8N257 59 73 HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J no no 2 6.405E-44 190.66 By MS/MS By MS/MS 4 3 239970000 138380000 101590000 355 1648;1528 411;412;413 988;989;990;991;992;993;994 1015;1016;1017;1018;1019;1020;1021 1020 554;555 6 AMLDQLMGTSR MSAQAQMRAMLDQLMG DQLMGTSRDGDTTRQR R A M S R D 1 1 0 1 0 1 0 1 0 0 2 0 2 0 0 1 1 0 0 0 0 0 11 0 1221.5846 Q9Y383;V9GZ75;F8WEU3 Q9Y383 9 19 LUC7L2;C7orf55-LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 2 0.0035006 90.759 By matching By MS/MS 2 2 59627000 28413000 31214000 356 3103 414;415 995;996;997;998 1022;1023 1023 1237;1238 6661 0 AMLDSGIYPPGSPGK AKETARRRAMLDSGIY YPPGSPGK________ R A M G K - 1 0 0 1 0 0 0 3 0 1 1 1 1 0 3 2 0 0 1 0 0 0 15 0 1488.7283 O95295 O95295 122 136 SNAPIN SNARE-associated protein Snapin yes yes 2 4.1959E-16 145.94 By MS/MS By MS/MS 3 1 39136000 26308000 12828000 357 1589 416;417 999;1000;1001;1002 1024;1025;1026;1027;1028 1026 574 3011 4 AMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTR HITPMQYKAMQAAGQI VVGSQMTRQARRLYVG K A M T R Q 6 1 0 1 0 3 0 3 0 1 3 0 3 0 6 1 6 0 0 4 0 0 38 0 3787.9675 P26368;K7ELP8 P26368 109 146 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 3 0.0097618 59.399 By MS/MS By matching 1 1 35969000 22103000 13866000 358 1766 418 1003;1004 1029 1029 667;668;669 7416 1 AMSLNTLNVDAPR AGAAGMKRAMSLNTLN TLNVDAPRAPGTQFPS R A M P R A 2 1 2 1 0 0 0 0 0 0 2 0 1 0 1 1 1 0 0 1 0 0 13 0 1400.7082 Q6P597 Q6P597 464 476 KLC3 Kinesin light chain 3 yes yes 2 2.4719E-11 146.84 By MS/MS By MS/MS 2 2 53483000 29864000 23619000 359 2323 419;420 1005;1006;1007;1008 1030;1031;1032;1033 1033 933 4684 4 AMSTTSISSPQPGK EIFKQKERAMSTTSIS ISSPQPGKLRSPFLQK R A M G K L 1 0 0 0 0 1 0 1 0 1 0 1 1 0 2 4 2 0 0 0 0 0 14 0 1390.6762 H0Y5J4;Q9UJU6;B4DDD6 H0Y5J4 196 209 DBNL Drebrin-like protein yes no 2 6.5281E-05 118.52 By MS/MS By MS/MS 4 4 196620000 101360000 95260000 360 1129 421;422 1009;1010;1011;1012;1013;1014;1015;1016 1034;1035;1036;1037;1038;1039;1040;1041 1037 411 2145;2146;2147 8 AMTLSPQEEVAAGQMASSSR TNHLVAGRAMTLSPQE GQMASSSRSGPVKLEF R A M S R S 4 1 0 0 0 2 2 1 0 0 1 0 2 0 1 4 1 0 0 1 0 0 20 0 2049.9459 Q9Y6A5 Q9Y6A5 313 332 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 2;3 0.00070162 88.951 By MS/MS By MS/MS 3 3 41273000 18922000 22351000 361 3146 423;424 1017;1018;1019;1020;1021;1022 1042;1043;1044;1045 1045 1247;1248 6728;7956 4 AMTMPPVSPVGAEGPVVLR STTRGMTRAMTMPPVS AEGPVVLRSKDGRERE R A M L R S 2 1 0 0 0 0 1 2 0 0 1 0 2 0 4 1 1 0 0 4 0 0 19 0 1907.0009 A4QPE4;O15020 A4QPE4 896 914 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes no 2;3 6.3425E-05 98 By MS/MS By MS/MS 2 2 42353000 20720000 21633000 362 461 425 1023;1024;1025;1026 1046;1047;1048;1049;1050 1047 177;178 857 5 ANALLSPPRAPSK RSVADELRANALLSPP SPPRAPSKDKNGRRPS R A N S K D 3 1 1 0 0 0 0 0 0 0 2 1 0 0 3 2 0 0 0 0 0 0 13 1 1320.7514 Q5D1E8 Q5D1E8 339 351 ZC3H12A Ribonuclease ZC3H12A yes yes 4 0.017101 46.892 By matching By MS/MS 1 1 35026000 18594000 16432000 363 2212 426 1027;1028 1051 1051 4426 1 ANKAFSR GFEATPVKANKAFSRG KANKAFSRGPLSPQEV K A N S R G 2 1 1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 7 1 792.42424 R4GMW8;Q86UB2 R4GMW8 312 318 BIVM-ERCC5;BIVM Basic immunoglobulin-like variable motif-containing protein yes no 2 0.0259 60.294 By MS/MS 1 0 0 0 364 3158 427 1029 1052 1052 1 ANLSLLR ISDSEGFKANLSLLRR KANLSLLRRPGEKTYT K A N L R R 1 1 1 0 0 0 0 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 7 0 785.47594 P23246 P23246 280 286 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.02432 114.02 By MS/MS 1 2389900 2389900 0 365 1753 428 1030 1053 1053 1 ANMHISESQQEFFR PGLVHQPRANMHISES ESQQEFFRMLDEKIEK R A N F R M 1 1 1 0 0 2 2 0 1 1 0 0 1 2 0 2 0 0 0 0 0 0 14 0 1722.7784 Q9H246 Q9H246 88 101 C1orf21 Uncharacterized protein C1orf21 yes yes 2;3 0.0011143 81.656 By MS/MS By MS/MS 2 2 34327000 14549000 19778000 366 2817 429 1031;1032;1033;1034 1054;1055;1056;1057;1058;1059;1060;1061 1061 1117 5897;5898 8 ANNLHSGDNFQLNDSEIER VTFYGLLRANNLHSGD LNDSEIERQHFKDQDM R A N E R Q 1 1 4 2 0 1 2 1 1 1 2 0 0 1 0 2 0 0 0 0 0 0 19 0 2171.9832 F8VQX7;Q9BZF1;F8VUA7 F8VQX7 300 318 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 yes no 3 0.031011 41.672 By MS/MS By matching 1 1 15157000 6811800 8345600 367 1003 430 1035;1036 1062 1062 1 ANNSKELSMCFTELTTNIIPGSNK SVQEQGLKANNSKELS NIIPGSNKVIKPNSGP K A N N K V 1 0 4 0 1 0 2 1 0 2 2 2 1 1 1 3 3 0 0 0 0 0 24 1 2668.2837 O00451 O00451 412 435 GFRA2 GDNF family receptor alpha-2 yes yes 3 0.011457 48.656 By MS/MS 1 10165000 0 10165000 368 1436 431 1037 1063 1063 505 2639 1 ANPLSLDSAR DLLRAIPRANPLSLDS PLSLDSARWPLPPLPL R A N A R W 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 10 0 1042.5407 O14654 O14654 985 994 IRS4 Insulin receptor substrate 4 yes yes 2 0.015525 68.676 By matching By MS/MS 1 1 4675400 2033200 2642200 369 1453 432 1038;1039 1064 1064 2680 1 ANSDIISLNFR LGMENFARANSDIISL DIISLNFRSASMISSD R A N F R S 1 1 2 1 0 0 0 0 0 2 1 0 0 1 0 2 0 0 0 0 0 0 11 0 1248.6463 Q8TC76 Q8TC76 299 309 FAM110B Protein FAM110B yes yes 2 0.0033904 85.45 By MS/MS By matching 1 1 8886300 4234200 4652200 370 2536 433 1040;1041 1065 1065 5178 1 ANSDTDLVTSESR PENMTLQRANSDTDLV DLVTSESRSSLTASMY R A N S R S 1 1 1 2 0 0 1 0 0 0 1 0 0 0 0 3 2 0 0 1 0 0 13 0 1393.6321 Q9P2P5;C9JHL2;C9JPI9 Q9P2P5 46 58 HECW2 E3 ubiquitin-protein ligase HECW2 yes no 2 0.00018734 120.21 By MS/MS By MS/MS 1 1 24273000 10207000 14066000 371 2986 434 1042;1043 1066;1067 1066 6283 2 ANSFVGTAQYVSPELLTEK SPESKQARANSFVGTA SPELLTEKSACKSSDL R A N E K S 2 0 1 0 0 1 2 1 0 0 2 1 0 1 1 2 2 0 1 2 0 0 19 0 2053.0368 E9PER6;Q6A1A2;O15530 E9PER6 212 230 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 yes no 2 9.4649E-86 204.51 By MS/MS By MS/MS 1 1 169260000 86647000 82615000 372 860 435 1044;1045 1068;1069;1070 1068 1591 3 ANSLGDLYAQK RQLSTCQRANSLGDLY LGDLYAQKNSGVTANG R A N Q K N 2 0 1 1 0 1 0 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 11 0 1178.5932 Q13009 Q13009 229 239 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 yes yes 2 0.0016752 101.39 By MS/MS By MS/MS 1 1 53996000 24956000 29040000 373 2036 436 1046;1047 1071;1072 1072 4001 2 ANSTSDSVFTETPSPVLK PGHNEFFRANSTSDSV ETPSPVLKNAISLPTI R A N L K N 1 0 1 1 0 0 1 0 0 0 1 1 0 1 2 4 3 0 0 2 0 0 18 0 1878.9211 C9JEZ4;Q9UKI2 C9JEZ4 87 104 CDC42EP3 Cdc42 effector protein 3 yes no 2 1.9037E-43 178.71 By MS/MS By MS/MS 1 1 22683000 10768000 11915000 374 661 437 1048;1049 1073;1074 1073 1226 2 ANTLSPVR QPRFANFRANTLSPVR ANTLSPVRFFVDKKWN R A N V R F 1 1 1 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 8 0 856.47667 H0YN99;Q9H792;H3BUZ5 H0YN99 277 284 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.0082792 103.34 By MS/MS By MS/MS 1 1 23839000 14243000 9595900 375 1218 438 1050;1051 1075;1076 1075 2275 2 ANTSSSSSNSSKLPPVCYEIITLK RSKKSSKKANTSSSSS CYEIITLKTKKKKMAA K A N L K T 1 0 2 0 1 0 1 0 0 2 2 2 0 0 2 7 2 0 1 1 0 0 24 1 2582.2898 Q9Y2F9 Q9Y2F9 33 56 BTBD3 BTB/POZ domain-containing protein 3 yes yes 2 0.0041112 52.509 By MS/MS 1 2838600 0 2838600 376 3090 439 1052 1077 1077 150 6633;6634;6635 1 ANVSSPHREFPPATAR XIHEQWEKANVSSPHR EFPPATAREVDPLRIP K A N A R E 3 2 1 0 0 0 1 0 1 0 0 0 0 1 3 2 1 0 0 1 0 0 16 1 1735.8754 H0Y555;Q5QPM9;Q5QPM7;Q92530 H0Y555 9 24 PSMF1 Proteasome inhibitor PI31 subunit yes no 3 0.0055757 65.374 By MS/MS By MS/MS 2 1 39268000 24475000 14793000 377 1126 440 1053;1054;1055 1078;1079;1080 1080 2142;2143 3 APAGQEEPGTPPSSPLSAEQLDR AAAIPAKKAPAGQEEP LSAEQLDRIQRNKAAA K A P D R I 3 1 0 1 0 2 3 2 0 0 2 0 0 0 5 3 1 0 0 0 0 0 23 0 2333.1135 P13051;Q68DM5;F5GYA2 P13051 51 73 UNG;DKFZp781L1143 Uracil-DNA glycosylase yes no 2 0.00058288 88.168 By MS/MS 1 10869000 0 10869000 378 1691 441 1056 1081 1081 3188;3189;7397 1 APASPGAGNPPGTPK VSAYDQLKAPASPGAG GNPPGTPKGKRELMSN K A P P K G 3 0 1 0 0 0 0 3 0 0 0 1 0 0 5 1 1 0 0 0 0 0 15 0 1317.6677 Q9ULD9;B3KPE6;A0A0C4DGB8 Q9ULD9 624 638 ZNF608 Zinc finger protein 608 yes no 2 0.02642 76.068 By MS/MS By matching 1 1 10453000 4992900 5460500 379 3039 442 1057;1058 1082 1082 6396 1 APASPGAGSDAQGPQFGWDHSLHK KVVSRKRKAPASPGAG GWDHSLHKRKRLPPVK K A P H K R 4 0 0 2 0 2 0 4 2 0 1 1 0 1 3 3 0 1 0 0 0 0 24 0 2417.1149 Q5T6F0 Q5T6F0 12 35 DCAF12 DDB1- and CUL4-associated factor 12 yes yes 3 0.014346 45.737 By matching By MS/MS 1 1 16099000 10543000 5555900 380 2245 443 1059;1060 1083 1083 4498 1 APDTNKEDDSKDNDSESDYMFMAPGAGAIPK PPAPSPPKAPDTNKED PGAGAIPKNPRNPQGG K A P P K N 4 0 2 6 0 0 2 2 0 1 0 3 2 1 3 3 1 0 1 0 0 0 31 2 3315.4184 O14654 O14654 761 791 IRS4 Insulin receptor substrate 4 yes yes 3 0.030349 44.483 By MS/MS 1 0 0 0 381 1453 444 1061 1084 1084 515;516 1 APEGEETEFYVSPEDLEAQLQSDER CCGKCKPKAPEGEETE AQLQSDEREATDTPIV K A P E R E 2 1 0 2 0 2 7 1 0 0 2 0 0 1 2 2 1 0 1 1 0 0 25 0 2867.2621 Q9H3Z4 Q9H3Z4 140 164 DNAJC5 DnaJ homolog subfamily C member 5 yes yes 3 0.0025402 58.332 By matching By MS/MS 1 1 13077000 4091700 8985000 382 2831 445 1062;1063 1085 1085 8459 1 APELPNTSSSPSLK LNLTAKPKAPELPNTS TSSSPSLKMSSCVPRP K A P L K M 1 0 1 0 0 0 1 0 0 0 2 1 0 0 3 4 1 0 0 0 0 0 14 0 1426.7304 Q9UN79 Q9UN79 301 314 SOX13 Transcription factor SOX-13 no no 1 NaN 0 0 0 383 3057 0 APGASPGNPLSPSLSDKDR SLKKFACKAPGASPGN PSLSDKDRGLKGAGGS K A P D R G 2 1 1 2 0 0 0 2 0 0 2 1 0 0 4 4 0 0 0 0 0 0 19 1 1864.9279 Q7Z5J4 Q7Z5J4 1348 1366 RAI1 Retinoic acid-induced protein 1 yes yes 3 0.02551 47.732 By matching By MS/MS 1 2 26242000 9217500 17024000 384 2389 446 1064;1065;1066 1086 1086 4857 1 APGTPTYSYVPPQW PVTVPTYRAPGTPTYS YSYVPPQW________ R A P Q W - 1 0 0 0 0 1 0 1 0 0 0 0 0 0 4 1 2 1 2 1 0 0 14 0 1562.7405 A1KXE4 A1KXE4 182 195 FAM168B Myelin-associated neurite-outgrowth inhibitor yes yes 2 0.0040085 89.189 By MS/MS By MS/MS 1 1 8315200 5840600 2474600 385 440 447 1067;1068 1087;1088 1088 6961 2 APGYPSSPVTTASGTTLR HHHHPGLRAPGYPSSP TASGTTLRLPPLQPEE R A P L R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 3 3 4 0 1 1 0 0 18 0 1761.8897 Q9HCK8 Q9HCK8 2513 2530 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 2;3 8.8891E-05 123.4 By MS/MS By MS/MS 2 2 193930000 107680000 86248000 386 2877 448 1069;1070;1071;1072 1089;1090;1091;1092;1093 1092 6056 5 APIDTSDVEEK ITAFKMEKAPIDTSDV DTSDVEEKAEEIIAEA K A P E K A 1 0 0 2 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1202.5667 D6RIY6;Q06265 D6RIY6 285 295 EXOSC9 Exosome complex component RRP45 yes no 2 2.4368E-20 174.21 By MS/MS By MS/MS 1 1 362660000 174870000 187790000 387 768 449 1073;1074 1094;1095 1094 1377 2 APIIAVTR QVARYRPRAPIIAVTR APIIAVTRNPQTARQA R A P T R N 2 1 0 0 0 0 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 8 0 839.52289 P14618;B4DNK4;H3BTN5;H3BR70 P14618 448 455 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 2 0.0017837 101.64 By MS/MS By matching 1 1 17602000 7169300 10433000 388 1700 450 1075;1076 1096 1096 0 APILIATDVASR LNEFKHGKAPILIATD IATDVASRGLDVEDVK K A P S R G 3 1 0 1 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1225.703 J3KTA4;P17844;A0A0U1RQJ0;Q92841 Q92841 392 403 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.0069783 84.817 By MS/MS By MS/MS 1 1 18970000 9172300 9798100 389 1341;2604 451 1077;1078 1097;1098 1097 2 APKEEADYEDDFLEYDQEHIR EEESLMWRAPKEEADY EYDQEHIRFIDNMLMG R A P I R F 2 1 0 4 0 1 5 0 1 1 1 1 0 1 1 0 0 0 2 0 0 0 21 1 2611.1351 Q9UPY3;H0YJZ6 Q9UPY3 1431 1451 DICER1 Endoribonuclease Dicer yes no 3 3.2158E-19 114.1 By MS/MS 1 15805000 15805000 0 390 3071 452 1079 1099 1099 8506 0 APKPEDIDEEDDDVPDLVENFDEASKNEAN PRQVLDSKAPKPEDID EASKNEAN________ K A P A N - 3 0 3 7 0 0 6 0 0 1 1 2 0 1 3 1 0 0 0 2 0 0 30 2 3358.4485 Q96K17 Q96K17 129 158 BTF3L4 Transcription factor BTF3 homolog 4 yes yes 3 0.0054661 55.413 By MS/MS By matching 1 1 23470000 21327000 2143000 391 2676 453 1080;1081 1100 1100 1 APKPPTDGSTSPTSTPSEDQEALGK EEGEGRDRAPKPPTDG EDQEALGKKPKAPALR R A P G K K 2 0 0 2 0 1 2 2 0 0 1 2 0 0 5 4 4 0 0 0 0 0 25 1 2497.182 Q8NHM5;S4R3G4;F8WBN2;F6SRV7 Q8NHM5 435 459 KDM2B Lysine-specific demethylase 2B yes no 3 0.003755 56.631 By MS/MS By MS/MS 1 1 24765000 13838000 10927000 392 2525 454 1082;1083 1101;1102 1101 5154 2 APLATGEDDDDEVPDLVENFDEASKNEAN PKQSVDGKAPLATGED EASKNEAN________ K A P A N - 4 0 3 6 0 0 5 1 0 0 2 1 0 1 2 1 1 0 0 2 0 0 29 1 3118.3375 P20290 P20290 178 206 BTF3 Transcription factor BTF3 yes yes 3 6.5286E-11 123.68 By MS/MS By matching 1 1 228670000 160390000 68278000 393 1737 455 1084;1085 1103 1103 1 APNPTATSPPASAPR SQTKLQARAPNPTATS SPPASAPRTAMRLPAG R A P P R T 4 1 1 0 0 0 0 0 0 0 0 0 0 0 5 2 2 0 0 0 0 0 15 0 1433.7263 Q8IV32 Q8IV32 90 104 CCDC71 Coiled-coil domain-containing protein 71 yes yes 2 0.01239 69.485 By matching By MS/MS 1 1 19309000 9776100 9533300 394 2425 456 1086;1087 1104 1104 4960 1 APPAPLAASEVTNSNSAER SLQYRGLKAPPAPLAA TNSNSAERRKPHSWWG K A P E R R 5 1 2 0 0 0 2 0 0 0 1 0 0 0 3 3 1 0 0 1 0 0 19 0 1880.9228 Q9Y2U8 Q9Y2U8 172 190 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 0.00013247 121.26 By MS/MS By MS/MS 1 1 13184000 6710000 6474300 395 3095 457 1088;1089 1105;1106;1107 1105 6643 3 APPQTHLPSGASSGTGSASATHGGGSPPGTR KVIHLVERAPPQTHLP GGSPPGTRGPGASVHD R A P T R G 4 1 0 0 0 1 0 7 2 0 1 0 0 0 5 6 4 0 0 0 0 0 31 0 2784.3175 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;F6S6P2;X6REW1;A0A0G2JJM1;F6TC96;F6UR09;F6U1F2;F6XTU0;A0A0G2JJR8;A0A1B0GX79;F6WML8;F6VEM6;F6X9W3;F6U341 A0A0G2JL47 88 118 BAT3;BAG6 Large proline-rich protein BAG6 yes no 3;4 3.3263E-05 70.112 By MS/MS By MS/MS 2 2 151460000 79842000 71622000 396 6 458 1090;1091;1092;1093 1108;1109;1110 1110 7;6835 3 APPTLQAETATKPQATSAPSPAPK MVPATDTKAPPTLQAE SAPSPAPKQSFLFGTQ K A P P K Q 6 0 0 0 0 2 1 0 0 0 1 2 0 0 6 2 4 0 0 0 0 0 24 1 2359.2383 A0A087WY75;A0A075B7F8;A8CG34;Q96HA1 Q96HA1 678 701 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 no no 3 3.2276E-06 93.236 By MS/MS By matching 1 1 67134000 37247000 29887000 397 2660;24 459 1094;1095 1111;1112 1111 44 2 APQQQPPPQQPPPPQPPPQQPPPPPSYSPAR NNRGSYNRAPQQQPPP PPSYSPARNPPGASTY R A P A R N 2 1 0 0 0 8 0 0 0 0 0 0 0 0 17 2 0 0 1 0 0 0 31 0 3327.6789 A0A0A0MRA5;B7Z4B8;Q9BUJ2;M0R3F1 A0A0A0MRA5 591 621 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 3;4 0.0002113 60.51 By MS/MS By MS/MS 2 2 73918000 49154000 24764000 398 204 460 1096;1097;1098;1099 1113;1114;1115;1116;1117 1114 362;363 4 APQTSSSPPPVR HSPSPRPRAPQTSSSP SSSPPPVRRGASSSPQ R A P V R R 1 1 0 0 0 1 0 0 0 0 0 0 0 0 4 3 1 0 0 1 0 0 12 0 1222.6306 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 699 710 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 3.9951E-10 143.55 By MS/MS By MS/MS 2 2 589350000 284700000 304650000 399 511 461;462 1100;1101;1102;1103 1118;1119;1120;1121;1122;1123 1118 938;939;940;6970 6 APQTSSSPPPVRR HSPSPRPRAPQTSSSP SSPPPVRRGASSSPQR R A P R R G 1 2 0 0 0 1 0 0 0 0 0 0 0 0 4 3 1 0 0 1 0 0 13 1 1378.7317 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 699 711 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.015775 84.352 By MS/MS By matching 1 1 68248000 26111000 42137000 400 511 463 1104;1105 1124 1124 938;939;940;6970 1 APSASVDSSLYNLPR IYDSPPSRAPSASVDS SSLYNLPRSYSHDVLP R A P P R S 2 1 1 1 0 0 0 0 0 0 2 0 0 0 2 4 0 0 1 1 0 0 15 0 1575.7893 B7Z3B9;Q13480 B7Z3B9 146 160 GAB1 GRB2-associated-binding protein 1 yes no 2 5.2242E-43 185.99 By MS/MS By MS/MS 1 1 51043000 28921000 22122000 401 588 464 1106;1107 1125;1126 1125 1070;1071 2 APSDSSLGTPSDGRPELR DFSQPMNRAPSDSSLG SDGRPELRGPGRSRTK R A P L R G 1 2 0 2 0 0 1 2 0 0 2 0 0 0 3 4 1 0 0 0 0 0 18 1 1840.8915 M0R2H7;M0R0F9;W4VSQ9;Q15642 M0R2H7 294 311 TRIP10 Cdc42-interacting protein 4 yes no 3 0.0133 54.953 By MS/MS 1 37541000 0 37541000 402 1418 465 1108 1127 1127 2598 1 APSLTDLVK SIPPTLTKAPSLTDLV PSLTDLVKSGPGKAKE K A P V K S 1 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 1 0 0 1 0 0 9 0 942.5386 O15014 O15014 1053 1061 ZNF609 Zinc finger protein 609 yes yes 2 0.00056203 115.91 By MS/MS By MS/MS 1 1 16106000 8924700 7180900 403 1466 466 1109;1110 1128;1129;1130;1131;1132;1133 1129 2729 6 APSPPLSQVFQTR TTSLLGQRAPSPPLSQ LSQVFQTRAASADYLR R A P T R A 1 1 0 0 0 2 0 0 0 0 1 0 0 1 3 2 1 0 0 1 0 0 13 0 1426.7569 Q9NRA8;B1AKL4 Q9NRA8 562 574 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 2 0.01184 71.529 By MS/MS By MS/MS 1 1 24400000 11131000 13269000 404 2906 467 1111;1112 1134;1135;1136 1134 6125 3 APSPPPPGSEAAPSPSKR HSAAAAGRAPSPPPPG AAPSPSKRKRTPSDKS R A P K R K 3 1 0 0 0 0 1 1 0 0 0 1 0 0 7 4 0 0 0 0 0 0 18 1 1728.8795 A0A096LNX8;Q96GP6 A0A096LNX8 685 702 SCARF2 Scavenger receptor class F member 2 yes no 3 0.0272 56.746 By MS/MS 1 0 0 0 405 180 468 1113 1137 1137 300 1 APSPTKPLR AAQRSGPRAPSPTKPL PSPTKPLRRSQRKSGS R A P L R R 1 1 0 0 0 0 0 0 0 0 1 1 0 0 3 1 1 0 0 0 0 0 9 1 965.56581 B5MBX0;Q96FF9 B5MBX0 19 27 CDCA5 Sororin yes no 2 0.029366 70.525 By MS/MS By matching 1 1 29265000 16413000 12853000 406 573 469 1114;1115 1138 1138 1 APSRDEGSLLLGSR CGEASRGRAPSRDEGS GSLLLGSRRPRRDAAE R A P S R R 1 2 0 1 0 0 1 2 0 0 3 0 0 0 1 3 0 0 0 0 0 0 14 1 1456.7634 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 252 265 LRRC41 Leucine-rich repeat-containing protein 41 yes no 3 0.00033083 94.61 By MS/MS By MS/MS 1 1 5899700 2556900 3342900 407 43 470 1116;1117 1139;1140;1141 1140 81 3 APSTPVPPSPAPAPGLTK SEKKKVSKAPSTPVPP APAPGLTKRVKKSKQP K A P T K R 3 0 0 0 0 0 0 1 0 0 1 1 0 0 7 2 2 0 0 1 0 0 18 0 1683.9196 F8W126;Q96EZ8;F8W0I9;F8VVA6;F8VP44 F8W126 87 104 MCRS1 Microspherule protein 1 yes no 2 0.00040045 104.81 By MS/MS By MS/MS 1 1 3383900 0 3383900 408 1030 471 1118;1119 1142;1143 1143 1929 2 APSTTLTLRSK RAPPPPKRAPSTTLTL TTLTLRSKSMTAELEE R A P S K S 1 1 0 0 0 0 0 0 0 0 2 1 0 0 1 2 3 0 0 0 0 0 11 1 1173.6717 A0A0U1RR93;A0A0U1RQS4;Q9BYB0 A0A0U1RR93 677 687 SHANK3 SH3 and multiple ankyrin repeat domains protein 3 yes no 2 0.027274 49.423 By MS/MS 1 0 0 0 409 388 472 1120 1144 1144 713;714 1 APSVANVGSHCDLSLK ESITRRRRAPSVANVG SHCDLSLKIPEISIQD R A P L K I 2 0 1 1 1 0 0 1 1 0 2 1 0 0 1 3 0 0 0 2 0 0 16 0 1653.8145 Q5HY54;Q60FE5;P21333 Q5HY54 2110 2125 FLNA Filamin-A yes no 2 0.0024929 82.663 By MS/MS By MS/MS 1 1 15064000 6062000 9002300 410 1742 473 1121;1122 1145;1146 1145 3280 2 APSVATVGSICDLNLK ESITRTSRAPSVATVG SICDLNLKIPGVRVMN R A P L K I 2 0 1 1 1 0 0 1 0 1 2 1 0 0 1 2 1 0 0 2 0 0 16 0 1643.8553 A0A0C4DGA1;E7EN95;O75369 A0A0C4DGA1 31 46 FLNB Filamin-B yes no 2 7.8503E-17 135.57 By MS/MS 1 0 0 0 411 312 474 1123 1147 1147 547 1 APSWEASAPPPPR RTRDNFTKAPSWEASA ASAPPPPREDAGTQAG K A P P R E 3 1 0 0 0 0 1 0 0 0 0 0 0 0 5 2 0 1 0 0 0 0 13 0 1361.6728 Q7Z2K8 Q7Z2K8 797 809 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 2 0.019425 65.895 By MS/MS 1 6441400 6441400 0 412 2372 475 1124 1148 1148 4805 1 APSWSFPSNLGTK LLFRSLQRAPSWSFPS FPSNLGTKTADLKGAS R A P T K T 1 0 1 0 0 0 0 1 0 0 1 1 0 1 2 3 1 1 0 0 0 0 13 0 1390.6881 Q9BTV6 Q9BTV6 351 363 DPH7 Diphthine methyltransferase yes yes 2 0.0028815 85.837 By MS/MS By matching 1 1 6830800 3738600 3092200 413 2751 476 1125;1126 1149 1149 5723 1 APSYSGLSMVSGVK AGLSGHHRAPSYSGLS LSMVSGVKQGSGPAPT R A P V K Q 1 0 0 0 0 0 0 2 0 0 1 1 1 0 1 4 0 0 1 2 0 0 14 0 1381.6912 Q9UBP0 Q9UBP0 266 279 SPAST Spastin yes yes 2 0.013002 66.059 By matching By MS/MS 1 2 20847000 4695000 16152000 414 2991 477;478 1127;1128;1129 1150;1151 1151 1185 6292 1 APVAGTCYQAEWDDYVPK FRKKYELRAPVAGTCY EWDDYVPKLYEQLSGK R A P P K L 3 0 0 2 1 1 1 1 0 0 0 1 0 0 2 0 1 1 2 2 0 0 18 0 2068.92 P30086 P30086 162 179 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 2 0.020195 66.989 By MS/MS By matching 1 1 8323200 4124600 4198700 415 1779 479 1130;1131 1152 1152 1 APVHFVEPLSPTGVAGHR NSQDHKVKAPVHFVEP PTGVAGHRKAPRLGQG K A P H R K 2 1 0 0 0 0 1 2 2 0 1 0 0 1 3 1 1 0 0 3 0 0 18 0 1869.985 Q5T5Y3 Q5T5Y3 1071 1088 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 3 0.00013554 95.307 By MS/MS By matching 1 1 37185000 23165000 14020000 416 2243 480 1132;1133 1153 1153 4496 1 APVPEPGLDLSLSPRPDSPQPR EPQVPQLRAPVPEPGL RPDSPQPRHGSPGRRK R A P P R H 1 2 0 2 0 1 1 1 0 0 3 0 0 0 7 3 0 0 0 1 0 0 22 1 2324.2125 Q8TAP8 Q8TAP8 35 56 PPP1R35 Protein phosphatase 1 regulatory subunit 35 yes yes 3 0.0061574 56.347 By MS/MS By MS/MS 1 1 34871000 18275000 16597000 417 2532 481 1134;1135 1154;1155;1156 1155 5169 3 APVPSTCSSTFPEELSPPSHQAK DLENFLQKAPVPSTCS SPPSHQAKREIRFLEL K A P A K R 2 0 0 0 1 1 2 0 1 0 1 1 0 1 5 5 2 0 0 1 0 0 23 0 2453.1533 A0A087WY61;Q14980;F5H0Z7;F5H763;F5H6Y5;F5H4J1 A0A087WY61 154 176 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 2.6696E-05 111.09 By MS/MS By MS/MS 1 2 107010000 54765000 52247000 418 118 482 1136;1137;1138 1157;1158;1159;1160;1161 1160 205 5 APVPTGEVYFADSFDR SSPKVTYKAPVPTGEV YFADSFDRGTLSGWIL K A P D R G 2 1 0 2 0 0 1 1 0 0 0 0 0 2 2 1 1 0 1 2 0 0 16 0 1769.8261 P27824;D6RHJ3;D6RD16;D6RAQ8;D6RAU8;D6RB85;D6RDP7;H0Y9Q7 P27824 62 77 CANX Calnexin yes no 2 0.0023171 92.925 By MS/MS By MS/MS 1 1 24407000 12651000 11755000 419 1769 483 1139;1140 1162;1163 1162 2 APVQPQQSPAAAPGGTDEKPSGK MEEGGRDKAPVQPQQS TDEKPSGKERRDAGDK K A P G K E 4 0 0 1 0 3 1 3 0 0 0 2 0 0 5 2 1 0 0 1 0 0 23 1 2217.1026 F8WBS8;C9JPC0;Q13200 F8WBS8 9 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 3 2.9248E-05 92.136 By MS/MS By MS/MS 1 1 92092000 47124000 44969000 420 682 484 1141;1142 1164;1165 1164 1258 2 APVSGSRSPDR ________________ SGSRSPDREASGSGGR M A P D R E 1 2 0 1 0 0 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 11 1 1127.5683 Q8N5F7 Q8N5F7 2 12 NKAP NF-kappa-B-activating protein yes yes 2 0.0011898 110.8 By MS/MS 1 10194000 0 10194000 421 2476 485 1143 1166 1166 5062 1 APVSSTESVIQSNTPTPPPSQPLNETAEEESR VADTTLTKAPVSSTES ETAEEESRISSSPTLL K A P S R I 2 1 2 0 0 2 5 0 0 1 1 0 0 0 6 6 4 0 0 2 0 0 32 0 3378.6063 B5MBZ0;Q9HC35 B5MBZ0 895 926 EML4 Echinoderm microtubule-associated protein-like 4 yes no 3 0.00024666 62.398 By MS/MS By MS/MS 1 1 34902000 17165000 17738000 422 574 486 1144;1145 1167;1168;1169 1169 1054;6996;6997 3 AQAEQQHNPAANPTMIRAK MCVEISYRAQAEQQHN NPTMIRAKCYHNLDAF R A Q A K C 5 1 2 0 0 3 1 0 1 1 0 1 1 0 2 0 1 0 0 0 0 0 19 1 2075.0331 H3BMZ2;A5YKK6 H3BMZ2 293 311 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 3 0.019588 50.653 By MS/MS By matching 1 1 5289700 2291700 2998000 423 463 487 1146;1147 1170 1170 180 0 AQAVSEEEEEEEGK SKEAPKRKAQAVSEEE EEEEEEGKSSSPKKKI K A Q G K S 2 0 0 0 0 1 7 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 14 0 1562.6584 G3V529;Q9GZR7 G3V529 35 48 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 0.00029698 116.35 By MS/MS By MS/MS 1 1 89139000 51816000 37323000 424 1084 488 1148;1149 1171;1172;1173 1172 2040 3 AQAVSEEEEEEEGKSSSPK SKEAPKRKAQAVSEEE EGKSSSPKKKIKLKKS K A Q P K K 2 0 0 0 0 1 7 1 0 0 0 2 0 0 1 4 0 0 0 1 0 0 19 1 2048.9022 G3V529;Q9GZR7 G3V529 35 53 DDX24 ATP-dependent RNA helicase DDX24 yes no 2;3 0.00027471 102.98 By MS/MS By MS/MS 2 2 44716000 21016000 23700000 425 1084 489 1150;1151;1152;1153 1174;1175 1175 2040;2041;2042 2 AQEEMRNKLNPYR NRKDLWTKAQEEMRNK RNKLNPYRKHMKETFQ K A Q Y R K 1 2 2 0 0 1 2 0 0 0 1 1 1 0 1 0 0 0 1 0 0 0 13 2 1647.8151 Q7RTR0 Q7RTR0 88 100 NLRP9 NACHT, LRR and PYD domains-containing protein 9 yes yes 3 0.03033 45.28 By MS/MS 1 7190000 7190000 0 426 2371 490 1154 1176 1176 953 0 AQENYEGSEEVSPPQTK NPQRTGQRAQENYEGS EVSPPQTKDQ______ R A Q T K D 1 0 1 0 0 2 4 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 17 0 1891.8436 Q93008 Q93008 2552 2568 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 2 0.015376 64.346 By MS/MS By matching 1 1 11275000 4579100 6695700 427 2614 491 1155;1156 1177 1177 5377 1 AQFYASEKTSPKR TTFQEETKAQFYASEK SEKTSPKRELAKDLPK K A Q K R E 2 1 0 0 0 1 1 0 0 0 0 2 0 1 1 2 1 0 1 0 0 0 13 2 1511.7732 J3KTJ7;I3L072;Q9BSJ5 J3KTJ7 138 150 C17orf80 Uncharacterized protein C17orf80 yes no 3 0.0086536 76.358 By MS/MS 1 2282000 2282000 0 428 1299 492 1157 1178 1178 2413 1 AQGEPVAGHESPKIPYEK QLRDRLCRAQGEPVAG SPKIPYEKQQLPKGRP R A Q E K Q 2 0 0 0 0 1 3 2 1 1 0 2 0 0 3 1 0 0 1 1 0 0 18 1 1935.969 D6REX3;O94979;D6RHZ5;H7BXG7;H0YAB3 D6REX3 789 806 SEC31A Protein transport protein Sec31A yes no 2;3 0.00078525 96.153 By MS/MS By MS/MS 2 2 173260000 98341000 74922000 429 761 493 1158;1159;1160;1161 1179;1180;1181;1182 1181 1370 4 AQIPEGDYLSYR GDPGSTRRAQIPEGDY EGDYLSYREFHSAGRT R A Q Y R E 1 1 0 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 0 12 0 1410.6779 Q96RT1 Q96RT1 1097 1108 ERBB2IP Protein LAP2 yes yes 2 2.6314E-07 134.57 By MS/MS By MS/MS 1 1 47400000 28681000 18719000 430 2705 494 1162;1163 1183;1184;1185 1183 8433 3 AQISSPNLR VARIAPQRAQISSPNL QISSPNLRTRPPPRRE R A Q L R T 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 9 0 984.53524 H0Y507;Q5TCZ1 H0Y507 344 352 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.015467 70.908 By MS/MS By MS/MS 1 1 9432900 4916600 4516300 431 1125 495 1164;1165 1186;1187 1187 2138;2139 2 AQKLPDLSPVENK QPRAGPIKAQKLPDLS DLSPVENKEHKPGPIG K A Q N K E 1 0 1 1 0 1 1 0 0 0 2 2 0 0 2 1 0 0 0 1 0 0 13 1 1437.7827 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2100 2112 PRRC2C Protein PRRC2C yes no 2 0.00088822 115.26 By MS/MS By MS/MS 1 1 30517000 13895000 16622000 432 802 496 1166;1167 1188;1189 1188 1430 2 AQLEPVASPAK ELQLVTYKAQLEPVAS EPVASPAKKPKVQSGS K A Q A K K 3 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 11 0 1109.6081 Q15149 Q15149 1428 1438 PLEC Plectin yes yes 2 0.0026866 87.216 By MS/MS By matching 1 1 24546000 12980000 11566000 433 2130 497 1168;1169 1190 1190 4213 1 AQLSPGIYDDTSAR STLHEAPKAQLSPGIY IYDDTSARRTPVSYQN K A Q A R R 2 1 0 2 0 1 0 1 0 1 1 0 0 0 1 2 1 0 1 0 0 0 14 0 1492.7158 A0A088AWL3;O75376;E7EVK1 A0A088AWL3 1376 1389 NCOR1 Nuclear receptor corepressor 1 yes no 2 0.012044 70.47 By matching By MS/MS 1 1 145280000 73523000 71758000 434 177 498 1170;1171 1191 1191 289 1 AQLYLPSTSPPHEGLDGFAQELSR RQAEATARAQLYLPST GFAQELSRSLSVGLEK R A Q S R S 2 1 0 1 0 2 2 2 1 0 4 0 0 1 3 3 1 0 1 0 0 0 24 0 2612.2871 I3L1Z8;I3L1A6;Q8N137;I3L465 I3L1Z8 54 77 CNTROB Centrobin yes no 3 0.015524 45.011 By matching By MS/MS 1 1 17266000 10478000 6788300 435 1304 499 1172;1173 1192 1192 2422;2423;7241 1 AQPFGFIDSDTDAEEER PAEVHLERAQPFGFID DTDAEEERIPATPVVI R A Q E R I 2 1 0 3 0 1 3 1 0 1 0 0 0 2 1 1 1 0 0 0 0 0 17 0 1925.8279 Q14676 Q14676 321 337 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 1.4915E-06 130.01 By MS/MS By MS/MS 1 1 24153000 11823000 12330000 436 2098 500 1174;1175 1193;1194 1194 4139;7577 2 AQPFGFIDSDTDAEEERIPATPVVIPMK PAEVHLERAQPFGFID TPVVIPMKKRKIFHGV R A Q M K K 3 1 0 3 0 1 3 1 0 3 0 1 1 2 4 1 2 0 0 2 0 0 28 1 3072.5114 Q14676 Q14676 321 348 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.0026065 59.561 By matching By MS/MS 2 3 86898000 41464000 45433000 437 2098 501;502;503 1176;1177;1178;1179;1180 1195;1196;1197 1196 835 4139;7577 3 AQPSSASYQPVPADPFAIVSR EAYSAMPRAQPSSASY DPFAIVSRAQQMVEIL R A Q S R A 4 1 0 1 0 2 0 0 0 1 0 0 0 1 4 4 0 0 1 2 0 0 21 0 2187.096 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 413 433 AMOT Angiomotin yes no 3 1.9898E-06 125.35 By MS/MS By MS/MS 1 1 26842000 14747000 12094000 438 2197 504 1181;1182 1198;1199;1200 1200 8360 3 AQQCVSPSSSLCR ANIHTQSKAQQCVSPS SPSSSLCRKTTERNET K A Q C R K 1 1 0 0 2 2 0 0 0 0 1 0 0 0 1 4 0 0 0 1 0 0 13 0 1478.6606 B9EGE7;Q8TCN5 B9EGE7 190 202 ZNF507 Zinc finger protein 507 yes no 2 0.011817 71.558 By matching By MS/MS 1 1 5431000 2099200 3331700 439 611 505 1183;1184 1201 1201 1100;1101 1 AQQELVPPQQQASPPQLPK QGQPGLERAQQELVPP ASPPQLPKAMFSELSN R A Q P K A 2 0 0 0 0 6 1 0 0 0 2 1 0 0 5 1 0 0 0 1 0 0 19 0 2083.1062 F1T0I1;J3KNL6;O15027 F1T0I1 1057 1075 SEC16A Protein transport protein Sec16A yes no 2;3 1.0176E-07 133.84 By MS/MS By MS/MS 5 4 118130000 51736000 66390000 440 930 506 1185;1186;1187;1188;1189;1190;1191;1192;1193 1202;1203;1204;1205;1206;1207;1208;1209 1203 1732 8 AQQGLYQVPGPSPQFQSPPAK YLVPTPSKAQQGLYQV QFQSPPAKQTSTFSKQ K A Q A K Q 2 0 0 0 0 5 0 2 0 0 1 1 0 1 5 2 0 0 1 1 0 0 21 0 2224.1277 P56945;H3BVF0;H3BSY4;H3BQJ7;H3BSB2 P56945 123 143 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 3 1.5984E-05 98.804 By MS/MS By MS/MS 1 1 41602000 22209000 19393000 441 1919 507 1194;1195 1210;1211;1212 1211 8302 3 AQSAQSINSTEMPAREDCLK ________________ PAREDCLKRVSSEPVL R A Q L K R 3 1 1 1 1 2 2 0 0 1 1 1 1 0 1 3 1 0 0 0 0 0 20 1 2235.026 H7C5V9;A0A0C4DGE8;Q17RB8 H7C5V9 4 23 LONRF1 LON peptidase N-terminal domain and RING finger protein 1 yes no 2 0.030946 51.463 By MS/MS 1 0 0 0 442 315 508 1196 1213 1213 123 1 AQSLLSTDR AAVVEFQRAQSLLSTD QSLLSTDREASIDILH R A Q D R E 1 1 0 1 0 1 0 0 0 0 2 0 0 0 0 2 1 0 0 0 0 0 9 0 989.51417 J3QRY4;O00231 J3QRY4 12 20 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 2 0.0052971 86.189 By MS/MS 1 18486000 0 18486000 443 1357 509 1197 1214 1214 2507 1 AQSLVISPPAPSPR SEIHVEVKAQSLVISP SPPAPSPRKTPVASDQ K A Q P R K 2 1 0 0 0 1 0 0 0 1 1 0 0 0 4 3 0 0 0 1 0 0 14 0 1418.7882 P46013 P46013 573 586 MKI67 Antigen KI-67 yes yes 2 9.3758E-11 137.61 By MS/MS By MS/MS 1 2 54122000 26821000 27302000 444 1833 510;511 1198;1199;1200 1215;1216;1217 1216 3461;3462 3 AQSPGAVEEILDR ________________ AVEEILDRENKRMADS R A Q D R E 2 1 0 1 0 1 2 1 0 1 1 0 0 0 1 1 0 0 0 1 0 0 13 0 1383.6994 H7BXT7;A0A0C4DH16;B8ZZS0;Q9NYM9;E9PHY4 H7BXT7 7 19 BET1L BET1-like protein yes no 2 6.9765E-07 130.95 By MS/MS By MS/MS 1 1 48394000 27191000 21203000 445 330 512 1201;1202 1218;1219 1218 583 2 AQSPSSGDEPEPSPGKENAGLR REAARDARAQSPSSGD GKENAGLRGAPPRGAA R A Q L R G 2 1 1 1 0 1 3 3 0 0 1 1 0 0 4 4 0 0 0 0 0 0 22 1 2209.0247 Q9HCM7 Q9HCM7 29 50 FBRSL1 Fibrosin-1-like protein yes yes 3 0.0072511 53.958 By MS/MS 1 4043000 4043000 0 446 2879 513 1203 1220 1220 6063;6064 1 AQSSLGYIPLMR EEEGEGGKAQSSLGYI LGYIPLMRVVQSVRHT K A Q M R V 1 1 0 0 0 1 0 1 0 1 2 0 1 0 1 2 0 0 1 0 0 0 12 0 1334.7017 B4DTS2;Q9BZL6 B4DTS2 372 383 PRKD2 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2 yes no 2 4.2613E-06 113.24 By MS/MS By MS/MS 3 4 26497000 14234000 12263000 447 564 514;515 1204;1205;1206;1207;1208;1209;1210 1221;1222;1223;1224;1225;1226 1225 226 1042;1043;8075 5 AQSSPAAPASLSAPEPASQAR GGHRPLSRAQSSPAAP PEPASQARVLSSSETP R A Q A R V 7 1 0 0 0 2 1 0 0 0 1 0 0 0 4 5 0 0 0 0 0 0 21 0 1992.9865 H0YI15;J3KPH8;Q8WUI4 H0YI15 22 42 HDAC7 Histone deacetylase;Histone deacetylase 7 yes no 2;3 2.3199E-11 139.16 By MS/MS By MS/MS 2 2 66731000 35824000 30907000 448 1190 516 1211;1212;1213;1214 1227;1228;1229;1230 1227 2230;2231 4 AQSSPASATFPVSVQEPPTKPR GGHRPLSRAQSSPASA QEPPTKPRFTTGLVYD R A Q P R F 3 1 0 0 0 2 1 0 0 0 0 1 0 1 5 4 2 0 0 2 0 0 22 1 2281.1703 P56524 P56524 630 651 HDAC4 Histone deacetylase 4 yes yes 3 0.031041 48.616 By MS/MS 1 12039000 12039000 0 449 1917 517 1215 1231 1231 0 AQSYDIQAWK PRRRLRNRAQSYDIQA SYDIQAWKKQCEELLN R A Q W K K 2 0 0 1 0 2 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 10 0 1208.5826 Q8WWQ0 Q8WWQ0 1313 1322 PHIP PH-interacting protein yes yes 2 0.0033216 94.402 By matching By MS/MS 1 1 15601000 6290500 9310500 450 2565 518 1216;1217 1232 1232 5252 1 AQSYPDNHQEFSDYDNPIFEK YPKSRMPRAQSYPDNH YDNPIFEKFGKGGTYP R A Q E K F 1 0 2 3 0 2 2 0 1 1 0 1 0 2 2 2 0 0 2 0 0 0 21 0 2543.0877 Q9Y2U5 Q9Y2U5 237 257 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 yes yes 3 0.0014636 65.887 By MS/MS By MS/MS 1 1 52236000 26190000 26046000 451 3094 519 1218;1219 1233;1234;1235 1235 6640 3 AQTLPTSVVTITSESSPGKR QSTPASSRAQTLPTSV SESSPGKREKDKEKDK R A Q K R E 1 1 0 0 0 1 1 1 0 1 1 1 0 0 2 4 4 0 0 2 0 0 20 1 2058.0957 A0A087WUZ3;Q01082 A0A087WUZ3 2328 2347 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2;3 5.3875E-05 117.02 By MS/MS By MS/MS 3 3 264350000 132190000 132160000 452 67 520 1220;1221;1222;1223;1224;1225 1236;1237;1238;1239;1240;1241;1242 1237 118;119;6847;6848 7 AQTPPGPSLSGSKSPCPQEK ISPYPKVKAQTPPGPS KSPCPQEKSKDSLVQS K A Q E K S 1 0 0 0 1 2 1 2 0 0 1 2 0 0 5 4 1 0 0 0 0 0 20 1 2051.9946 Q9UQ35 Q9UQ35 1001 1020 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 4.1021E-05 97.284 By MS/MS By MS/MS 2 3 686450000 211950000 474500000 453 3074 521;522 1226;1227;1228;1229;1230 1243;1244;1245;1246;1247 1244 6505;6506;6507;7921 5 AQTQEFQGSEDYETALSGK KAREALQKAQTQEFQG YETALSGKEAL_____ K A Q G K E 2 0 0 1 0 3 3 2 0 0 1 1 0 1 0 2 2 0 1 0 0 0 19 0 2087.9284 C9K0C9;F8WF55;F8WCI3;A0A0A0MRG9;Q96SN8 C9K0C9 112 130 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes no 2 0.00013996 123.1 By MS/MS By MS/MS 1 1 12763000 7520700 5242000 454 213 523 1231;1232 1248;1249 1249 6889;8010 2 AQTVTDSMFAVASKDAGCVNK IAPPVPLKAQTVTDSM KDAGCVNKSTHEFKPQ K A Q N K S 4 0 1 2 1 1 0 1 0 0 0 2 1 1 0 2 2 0 0 3 0 0 21 1 2199.03 O43683 O43683 390 410 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 3 0.0317 41.53 By MS/MS 1 0 0 0 455 1504 524 1233 1250 1250 542 1 AQVEHLLHGYCRAGDGVESR A Q S R 2 2 0 1 1 1 2 3 2 0 2 0 0 0 0 1 0 0 1 2 0 0 20 1 2253.0709 REV__Q9NY15 yes yes 3 0.01515 46.818 By matching By MS/MS 1 1 29178000 20329000 8848700 + 456 3225 525 1234;1235 1251 1251 6821;8520 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER AVSVQERRAQVLATIH GGGSSPERVARGRGLP R A Q E R V 8 1 0 1 0 1 2 8 2 1 1 0 0 1 3 2 1 0 0 1 0 0 33 0 3012.4438 Q86WR7;D3DRR9 Q86WR7 283 315 PROSER2;C10orf47 Proline and serine-rich protein 2 yes no 3 0.0010473 55.532 By MS/MS 1 7572000 0 7572000 457 2412 526 1236 1252;1253 1252 4918;4919 2 ARFEELCSDLFR DFYTSITRARFEELCS ELCSDLFRSTLEPVEK R A R F R S 1 2 0 1 1 0 2 0 0 0 2 0 0 2 0 1 0 0 0 0 0 0 12 1 1541.7297 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37;P17066;P48741 A0A0G2JIW1 301 312 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 3 0.0024725 89.46 By MS/MS By MS/MS 1 1 3852800 2210600 1642200 458 351;1711 527 1237;1238 1254;1255 1254 1 ARFEELNADLFR DFYTSITRARFEELNA ELNADLFRGTLDPVEK R A R F R G 2 2 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 12 1 1479.747 P11142;E9PKE3;E9PN89;E9PNE6;P54652;A8K7Q2 P11142 300 311 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 3 0.00076498 92.856 By MS/MS 1 3975200 0 3975200 459 1680 528 1239 1256 1256 1 ARGDSEALDEES SDRQERERARGDSEAL SEALDEES________ R A R E S - 2 1 0 2 0 0 3 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 12 1 1277.5372 Q7Z4V5;A0A087WZ99 Q7Z4V5 660 671 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 2 0.018894 73.927 By MS/MS By MS/MS 1 1 67370000 35931000 31440000 460 2388 529 1240;1241 1257;1258 1257 4854 2 ARLLTHWEQMDYGVQFTASRK FETPDQGKARLLTHWE VQFTASRKFLTITPIV K A R R K F 2 2 0 1 0 2 1 1 1 0 2 1 1 1 0 1 2 1 1 1 0 0 21 2 2536.2645 J3KTF9;J3QRM9;Q8N138 J3KTF9 29 49 ORMDL3 ORM1-like protein 3 yes no 3 0.025532 44.743 By MS/MS 1 3717200 0 3717200 461 1343 530 1242 1259 1259 2483 0 ARQEEGADASEEDPTPAGEEDVKDAR ASEEDLTRARQEEGAD EEDVKDAREEDGVDTI R A R A R E 5 2 0 4 0 1 6 2 0 0 0 1 0 0 2 1 1 0 0 1 0 0 26 2 2771.2118 E5RHA3;Q86X53;H0YB25 E5RHA3 151 176 ERICH1 Glutamate-rich protein 1 yes no 3 0.00059608 74.429 By MS/MS By matching 1 1 45748000 28834000 16913000 462 780 531 1243;1244 1260 1260 1396 1 ARSPTDDKVK RSQEKIGKARSPTDDK SPTDDKVKIEDKSKSK K A R V K I 1 1 0 2 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 2 1115.5935 Q13523 Q13523 255 264 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 2;3 0.00094037 140.45 By MS/MS By MS/MS 2 3 86433000 56228000 30206000 463 2061 532 1245;1246;1247;1248;1249 1261;1262;1263 1261 4063 3 ARSVDALDDLTPPSTAESGSR GWRARRPRARSVDALD STAESGSRSPTSNGGR R A R S R S 3 2 0 3 0 0 1 1 0 0 2 0 0 0 2 4 2 0 0 1 0 0 21 1 2144.0346 S4R3V8;Q86X29 S4R3V8 443 463 LSR Lipolysis-stimulated lipoprotein receptor yes no 3 0.0015921 67.396 By MS/MS By MS/MS 1 1 14716000 6445900 8270300 464 2416 533 1250;1251 1264;1265;1266 1265 4929;4930 3 ARVGGSDEEASGIPSR KSLEGMKKARVGGSDE EASGIPSRTASLELGE K A R S R T 2 2 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 16 1 1586.7649 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53 301 316 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 3 0.010758 58.479 By MS/MS By MS/MS 1 1 14536000 7715600 6820600 465 283 534 1252;1253 1267;1268 1268 502 2 ASAGHVAVSSPTPETGPLQR VSQPCTPRASAGHVAV PETGPLQRLLPKARPM R A S Q R L 3 1 0 0 0 1 1 2 1 0 1 0 0 0 3 3 2 0 0 2 0 0 20 0 1960.9967 P42695 P42695 1320 1339 NCAPD3 Condensin-2 complex subunit D3 yes yes 2 0.02817 55.536 By MS/MS 1 5296900 5296900 0 466 1829 535 1254 1269 1269 3453 1 ASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK SPPPPVRRASAGPAPG STPLGSSKETRKQEKE R A S S K E 4 0 1 0 0 0 1 5 1 0 3 1 0 0 7 6 3 0 0 2 0 0 34 0 3137.5993 Q4KMP7 Q4KMP7 686 719 TBC1D10B TBC1 domain family member 10B yes yes 3 0.00069028 56.767 By matching By MS/MS 1 1 25528000 12096000 13431000 467 2195 536 1255;1256 1270 1270 4377;4378;4379;7622 1 ASAGRLTPESQSK SAPQSHARASAGRLTP LTPESQSKTSETSKGS R A S S K T 2 1 0 0 0 1 1 1 0 0 1 1 0 0 1 3 1 0 0 0 0 0 13 1 1330.6841 H7BZ56;H7BZC2;J3KPK1;C9JFZ1;A0A0D9SGJ6;J3KQV8;O43426 H7BZ56 35 47 SYNJ1 Synaptojanin-1 yes no 2 0.015371 76.01 By MS/MS By matching 2 1 8363700 7379900 983780 468 349 537 1257;1258;1259 1271 1271 622 1 ASAGTPSLSAGVSPK RRRGRRKRASAGTPSL LSAGVSPKRRALPSVA R A S P K R 3 0 0 0 0 0 0 2 0 0 1 1 0 0 2 4 1 0 0 1 0 0 15 0 1328.6936 Q8TEK3 Q8TEK3 1092 1106 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 0.0036403 80.245 By matching By MS/MS 1 1 37364000 12476000 24888000 469 2544 538 1260;1261 1272 1272 5196 1 ASALLFSSDEEDQWNIPASQTHLASDSR ASELSKKKASALLFSS THLASDSRSKGEPRDS K A S S R S 4 1 1 3 0 2 2 0 1 1 3 0 0 1 1 6 1 1 0 0 0 0 28 0 3074.4217 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6;A0A096LPC5;A0A0A0MR88 F8W7U3 525 552 FAM21A;FAM21C WASH complex subunit FAM21A no no 3 5.5069E-10 90.762 By MS/MS By MS/MS 1 1 36423000 14761000 21662000 470 814;183 539 1262;1263 1273;1274 1274 305;306 2 ASAPSPNAQVACDHCLK DVWTPPARASAPSPNA VACDHCLKEAAVKTCL R A S L K E 4 0 1 1 2 1 0 0 1 0 1 1 0 0 2 2 0 0 0 1 0 0 17 0 1824.8247 Q14258 Q14258 96 112 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.00094648 77.191 By MS/MS By MS/MS 1 1 26092000 16638000 9453400 471 2088 540 1264;1265 1275;1276 1275 4123 2 ASASRPQPAPADGADPPPAEEPEARPDGEGSPGK PDGASEPRASASRPQP DGEGSPGKARPGTARR R A S G K A 7 2 0 3 0 1 4 4 0 0 0 1 0 0 9 3 0 0 0 0 0 0 34 2 3307.5341 A9UF01;P11274 A9UF01 92 125 BCR/ABL fusion;BCR Breakpoint cluster region protein yes no 4 0.00087614 57.484 By MS/MS By MS/MS 1 1 29945000 15530000 14415000 472 510 541 1266;1267 1277;1278 1277 932 2 ASAVSELSPR YGTGSASRASAVSELS AVSELSPRERSPALKS R A S P R E 2 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1015.5298 Q9Y2W1 Q9Y2W1 236 245 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.00041196 127.56 By MS/MS By MS/MS 1 1 1104100000 564740000 539390000 473 3096 542 1268;1269 1279;1280;1281 1281 6645 3 ASDLEDEESAAR DLDGAGVRASDLEDEE EDEESAARGPSQEEED R A S A R G 3 1 0 2 0 0 3 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 12 0 1291.5528 E7ERS3;Q86VM9;H3BPD0 E7ERS3 45 56 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.00056075 109.6 By MS/MS By MS/MS 1 1 290660000 143740000 146920000 474 811 543 1270;1271 1282;1283 1283 1464 2 ASDPQSPPQVSR EEGDPRTRASDPQSPP QSPPQVSRHKSHYRNR R A S S R H 1 1 0 1 0 2 0 0 0 0 0 0 0 0 3 3 0 0 0 1 0 0 12 0 1267.6157 Q7L7X3 Q7L7X3 416 427 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 2 6.0426E-05 123.72 By MS/MS 1 12530000 12530000 0 475 2366 544 1272 1284;1285 1285 4797 2 ASEDTTSGSPPK KVEIGQKRASEDTTSG TTSGSPPKKSSAGPKR R A S P K K 1 0 0 1 0 0 1 1 0 0 0 1 0 0 2 3 2 0 0 0 0 0 12 0 1175.5306 H0YER7;G3V1C3;Q9BZZ5 H0YER7 271 282 API5 Apoptosis inhibitor 5 yes no 2 0.010646 81.95 By MS/MS By MS/MS 1 1 6827400 4547800 2279700 476 1062 545 1273;1274 1286;1287 1287 2008;2009;7170 2 ASEDTTSGSPPKK KVEIGQKRASEDTTSG TSGSPPKKSSAGPKRD R A S K K S 1 0 0 1 0 0 1 1 0 0 0 2 0 0 2 3 2 0 0 0 0 0 13 1 1303.6256 H0YER7;G3V1C3;Q9BZZ5 H0YER7 271 283 API5 Apoptosis inhibitor 5 yes no 2 1.159E-57 201.76 By MS/MS By MS/MS 1 1 620260000 166520000 453740000 477 1062 546 1275;1276 1288;1289;1290;1291;1292;1293;1294 1294 2008;2009;7170 7 ASEENLLSSSSVPSADRDSSPTTNSK DSKEDTQKASEENLLS SSPTTNSKLSALQRSS K A S S K L 2 1 2 2 0 0 2 0 0 0 2 1 0 0 2 9 2 0 0 1 0 0 26 1 2665.2315 Q9NRA8;B1AKL4 Q9NRA8 733 758 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 3 1.3457E-06 105.72 By MS/MS By MS/MS 1 1 34756000 17602000 17154000 478 2906 547 1277;1278 1295;1296;1297;1298 1298 6126;6127 4 ASEGLDACASPTK EAPLGEMRASEGLDAC DACASPTKSASACNRL R A S T K S 3 0 0 1 1 0 1 1 0 0 1 1 0 0 1 2 1 0 0 0 0 0 13 0 1305.5871 Q92618 Q92618 107 119 ZNF516 Zinc finger protein 516 yes yes 2 0.0040794 89.136 By MS/MS By matching 1 1 24341000 13340000 11002000 479 2588 548 1279;1280 1299 1299 7757 1 ASEIDQVVPAAQSSPINCEK EEKASEYRASEIDQVV SSPINCEKRENLLPFV R A S E K R 3 0 1 1 1 2 2 0 0 2 0 1 0 0 2 3 0 0 0 2 0 0 20 0 2142.0263 O94782;C9JWX4;C9JC88 O94782 54 73 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes no 2 0.0010342 84.249 By MS/MS By matching 1 1 18322000 7511400 10811000 480 1566 549 1281;1282 1300 1300 2962;2963 1 ASEIDQVVPAAQSSPINCEKR EEKASEYRASEIDQVV SPINCEKRENLLPFVG R A S K R E 3 1 1 1 1 2 2 0 0 2 0 1 0 0 2 3 0 0 0 2 0 0 21 1 2298.1274 O94782;C9JWX4;C9JC88 O94782 54 74 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes no 3 0.00027046 80.459 By MS/MS By MS/MS 1 1 27198000 16323000 10875000 481 1566 550 1283;1284 1301;1302 1302 2962;2963 2 ASEPLLSPPPFGESR SPGVGGGKASEPLLSP PPPFGESRKALEVKKE K A S S R K 1 1 0 0 0 0 2 1 0 0 2 0 0 1 4 3 0 0 0 0 0 0 15 0 1582.7991 O14686 O14686 2268 2282 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 6.9314E-21 155.26 By MS/MS By MS/MS 1 1 43377000 21605000 21772000 482 1454 551 1285;1286 1303;1304 1304 2692 2 ASEVTSMLQELLDSTMFSK DQHTMNTKASEVTSML LDSTMFSKGEVRAIRY K A S S K G 1 0 0 1 0 1 2 0 0 0 3 1 2 1 0 4 2 0 0 1 0 0 19 0 2116.0068 Q8IYM0 Q8IYM0 209 227 FAM186B Protein FAM186B yes yes 3 0.00073461 76.015 By MS/MS By MS/MS 1 1 13861000 7049700 6811600 483 2444 552 1287;1288 1305;1306 1305 987 4998;4999;7712 2 ASFDHSPDSLPLR PRGRTKKKASFDHSPD SPDSLPLRSSGRQAKK K A S L R S 1 1 0 2 0 0 0 0 1 0 2 0 0 1 2 3 0 0 0 0 0 0 13 0 1440.6997 Q8NB78 Q8NB78 12 24 KDM1B Lysine-specific histone demethylase 1B yes yes 3 0.011251 61.097 By matching By MS/MS 1 1 10034000 4648700 5385600 484 2495 553 1289;1290 1307 1307 5092 0 ASFGATGGPPAHLLTPSPLSGPGGSSLLEK SSGHTAEKASFGATGG GGSSLLEKFELESGAL K A S E K F 3 0 0 0 0 0 1 6 1 0 5 1 0 1 5 5 2 0 0 0 0 0 30 0 2802.4552 O14686 O14686 3183 3212 KMT2D Histone-lysine N-methyltransferase 2D yes yes 3 0.00042352 65.445 By MS/MS By MS/MS 1 1 18466000 11567000 6899500 485 1454 554 1291;1292 1308;1309 1309 2693;7288 2 ASGDPGASGMSPR GGGGRGGKASGDPGAS GASGMSPRASPLPPPP K A S P R A 2 1 0 1 0 0 0 3 0 0 0 0 1 0 2 3 0 0 0 0 0 0 13 0 1188.5193 Q8NDT2 Q8NDT2 99 111 RBM15B Putative RNA-binding protein 15B yes yes 2 1.682E-05 125.36 By MS/MS By matching 1 1 10232000 5835000 4397500 486 2510 555 1293;1294 1310 1310 5129 1 ASGEMASAQYITAALR KRYAGALRASGEMASA QYITAALRDLFDSMDK R A S L R D 5 1 0 0 0 1 1 1 0 1 1 0 1 0 0 2 1 0 1 0 0 0 16 0 1638.8036 A6NJA2;P54578 A6NJA2 96 111 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 2 1.3075E-05 121.27 By MS/MS By MS/MS 1 1 35434000 17714000 17721000 487 474 556 1295;1296 1311;1312 1312 181 867 2 ASGQAFELILSPR QVKELEKRASGQAFEL FELILSPRSKESVPEF R A S P R S 2 1 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 13 0 1387.746 A2A2D0;P16949 A2A2D0 15 27 STMN1 Stathmin yes no 2;3 2.5993E-102 229.02 By MS/MS By MS/MS 13 10 1139500000 658140000 481320000 488 447 557;558 1297;1298;1299;1300;1301;1302;1303;1304;1305;1306;1307;1308;1309;1310;1311;1312;1313;1314;1315;1316;1317;1318;1319 1313;1314;1315;1316;1317;1318;1319;1320;1321;1322;1323;1324;1325;1326;1327;1328;1329;1330;1331;1332;1333;1334;1335;1336;1337;1338;1339;1340;1341;1342;1343;1344 1327 834;835 31 ASGVAVSDGVIK ________________ AVSDGVIKVFNDMKVR M A S I K V 2 0 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 0 0 3 0 0 12 0 1101.603 E9PS23;E9PP50;P23528 E9PS23 2 13 CFL1 Cofilin-1 yes no 2 0.0049666 80.371 By MS/MS By matching 1 1 31346000 17204000 14142000 489 919 559 1320;1321 1345 1345 1711 1 ASIANSDGPTAGSQTPPFK GSVDGLDKASIANSDG GSQTPPFKRKGKLSTI K A S F K R 3 0 1 1 0 1 0 2 0 1 0 1 0 1 3 3 2 0 0 0 0 0 19 0 1844.8905 H9KVA6;F6TH74;J3KP75;O75167 H9KVA6 22 40 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 yes no 2 0.0027926 88.282 By MS/MS By MS/MS 1 1 10113000 4279400 5834000 490 994 560 1322;1323 1346;1347 1346 1869;7149 2 ASIGQSPGLPSTTFK VSSTSASKASIGQSPG GLPSTTFKLPSNSLGF K A S F K L 1 0 0 0 0 1 0 2 0 1 1 1 0 1 2 3 2 0 0 0 0 0 15 0 1489.7777 Q5VT52 Q5VT52 609 623 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 0.0017391 88.637 By MS/MS By MS/MS 1 1 120840000 61526000 59313000 491 2264 561 1324;1325 1348;1349;1350 1348 4536 3 ASINSLLSDKR DRIVNYSRASINSLLS NSLLSDKRSLNSVVTS R A S K R S 1 1 1 1 0 0 0 0 0 1 2 1 0 0 0 3 0 0 0 0 0 0 11 1 1202.6619 Q04656 Q04656 1462 1472 ATP7A Copper-transporting ATPase 1 yes yes 2 0.0026486 95.273 By MS/MS By MS/MS 1 1 9395500 4944500 4451000 492 1996 562 1326;1327 1351;1352 1351 3847 2 ASIQECILPDSPLYHNK SYLPGPVKASIQECIL DSPLYHNKVQFTPTGG K A S N K V 1 0 1 1 1 1 1 0 1 2 2 1 0 0 2 2 0 0 1 0 0 0 17 0 1983.9724 H7BXF4;B1PBA3;Q9NXE4 H7BXF4 159 175 SMPD4 Sphingomyelin phosphodiesterase 4 yes no 3 0.00010354 105.63 By MS/MS By MS/MS 1 1 8153700 3898800 4254900 493 534 563 1328;1329 1353;1354 1354 1008 2 ASLEDAPVDDLTR SPDQISHRASLEDAPV APVDDLTRKFTYLGSQ R A S T R K 2 1 0 3 0 0 1 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 13 0 1400.6783 C9J6P4;Q7Z2W4 C9J6P4 283 295 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 6.3485E-05 123.95 By MS/MS By MS/MS 1 1 69062000 36749000 32313000 494 642 564 1330;1331 1355;1356 1356 1196 2 ASLGSLEGEAEAEASSPK KGDLKSSKASLGSLEG EAEASSPKGKFSLFKS K A S P K G 4 0 0 0 0 0 4 2 0 0 2 1 0 0 1 4 0 0 0 0 0 0 18 0 1731.8163 Q09666 Q09666 5748 5765 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2;3 0.00018773 120.11 By MS/MS By MS/MS 3 4 58416000 30659000 27757000 495 2020 565;566 1332;1333;1334;1335;1336;1337;1338 1357;1358;1359;1360;1361;1362;1363 1358 3906;3907;3908 5 ASLNHSTAFNPQPQSQMQ PAPTPNPRASLNHSTA PQPQSQMQ________ R A S M Q - 2 0 2 0 0 4 0 0 1 0 1 0 1 1 2 3 1 0 0 0 0 0 18 0 1984.9061 A8MZI9 A8MZI9 239 256 RUNX1 yes yes 2 0.030926 40.377 By MS/MS 1 0 0 0 496 507 567 1339 1364 1364 202 1 ASLQSPFEQTNWK ELDKQEAKASLQSPFE PFEQTNWKELSRNEII K A S W K E 1 0 1 0 0 2 1 0 0 0 1 1 0 1 1 2 1 1 0 0 0 0 13 0 1534.7416 O95402 O95402 466 478 MED26 Mediator of RNA polymerase II transcription subunit 26 yes yes 2 0.0031623 85.163 By matching By MS/MS 1 1 11913000 6311300 5602100 497 1595 568 1340;1341 1365 1365 3023 1 ASLSEIGFGK PMSRRSRRASLSEIGF LSEIGFGKMETYIKLE R A S G K M 1 0 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 0 0 0 10 0 1007.5288 F5H6Z0;Q00537 F5H6Z0 126 135 CDK17 Cyclin-dependent kinase 17 yes no 2 0.031464 84.31 By MS/MS 1 0 0 0 498 985 569 1342 1366 1366 1846 1 ASLSSAPVVLVGDHA KLAQRRQRASLSSAPV VVLVGDHA________ R A S H A - 3 0 0 1 0 0 0 1 1 0 2 0 0 0 1 3 0 0 0 3 0 0 15 0 1421.7514 Q9HBH9 Q9HBH9 451 465 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 yes yes 2 0.00074564 104.17 By matching By MS/MS 1 1 11675000 7375200 4300100 499 2868 570 1343;1344 1367 1367 6036;6037;6038 1 ASLVALPEQTASEEETPPPLLTK RLTEDRKKASLVALPE TPPPLLTKEASSPPPH K A S T K E 3 0 0 0 0 1 4 0 0 0 4 1 0 0 4 2 3 0 0 1 0 0 23 0 2420.2686 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 341 363 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 1.4559E-08 132.78 By MS/MS By MS/MS 3 3 163850000 82043000 81806000 500 810 571 1345;1346;1347;1348;1349;1350 1368;1369;1370;1371;1372;1373;1374 1373 1448;1449;7080;7081;7082 7 ASLVSEEEEDEEEDKATPR SDLSDDGKASLVSEEE EEDKATPRRSRSRRSS K A S P R R 2 1 0 2 0 0 7 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 19 1 2161.9499 Q96GN5;C9J8L0;C9IZR6 Q96GN5 113 131 CDCA7L Cell division cycle-associated 7-like protein yes no 2;3 0.00045489 85.176 By MS/MS By MS/MS 2 2 37102000 18434000 18668000 501 2654 572 1351;1352;1353;1354 1375;1376;1377;1378;1379 1376 5475 5 ASMSEFLESEDGEVEQQR VCRPKRTKASMSEFLE DGEVEQQRTYSSGHNR K A S Q R T 1 1 0 1 0 2 5 1 0 0 1 0 1 1 0 3 0 0 0 1 0 0 18 0 2069.8848 J3QQW9;Q15022 J3QQW9 515 532 SUZ12 Polycomb protein SUZ12 yes no 2;3 1.7255E-15 145.69 By MS/MS By MS/MS 2 3 87099000 41958000 45141000 502 1352 573;574 1355;1356;1357;1358;1359 1380;1381;1382;1383;1384;1385 1382 473 2497 5 ASNWFSLWK A S W K 1 0 1 0 0 0 0 0 0 0 1 1 0 1 0 2 0 2 0 0 0 0 9 0 1137.5607 REV__K7ELD5 yes no 1 0.028418 46.426 By MS/MS 1 11020000 0 11020000 + 503 3193 575 1360 1386 1386 6791 0 ASPAPGSGHPEGPGAHLDMNSLDR ERKTPEGRASPAPGSG LDMNSLDRAQAAKNKG R A S D R A 3 1 1 2 0 0 1 4 2 0 2 0 1 0 4 3 0 0 0 0 0 0 24 0 2369.0819 O94826 O94826 90 113 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 3 0.0032035 56.48 By MS/MS By MS/MS 2 2 846440000 435130000 411310000 504 1570 576;577 1361;1362;1363;1364 1387;1388;1389;1390 1390 567 2977 4 ASPATPAGHPVSGLLLR EKTRLLSRASPATPAG PVSGLLLRAQSELGRS R A S L R A 3 1 0 0 0 0 0 2 1 0 3 0 0 0 3 2 1 0 0 1 0 0 17 0 1642.9155 Q9HCM7 Q9HCM7 789 805 FBRSL1 Fibrosin-1-like protein yes yes 3 0.0092077 56.553 By MS/MS By MS/MS 1 1 21551000 13394000 8157400 505 2879 578 1365;1366 1391;1392;1393 1392 6065 3 ASPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVK GGSRGGARASPATQPP PSATASVKMEPENKYL R A S V K M 7 0 0 1 0 1 0 3 0 0 4 1 0 0 12 4 5 0 0 2 0 0 40 0 3725.988 Q07666 Q07666 57 96 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 3;4 2.0458E-06 67.761 By MS/MS By MS/MS 1 1 256480000 103450000 153030000 506 2010 579 1367;1368 1394;1395;1396;1397 1396 3876 4 ASPEPQRENASPAPGTTAEEAMSR MEVQGAERASPEPQRE TAEEAMSRGPPPAPEG R A S S R G 5 2 1 0 0 1 4 1 0 0 0 0 1 0 4 3 2 0 0 0 0 0 24 1 2483.1347 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;H0Y710 A0A0G2JL47 957 980 BAT3;BAG6 Large proline-rich protein BAG6 yes no 3 0.030904 44.878 By matching By MS/MS 1 1 14323000 8379200 5943400 507 6 580 1369;1370 1398 1398 1 8;9 1 ASPFSVESLLSDSPPR RGAAGLPKASPFSVES LLSDSPPRRKAASNAA K A S P R R 1 1 0 1 0 0 1 0 0 0 2 0 0 1 3 5 0 0 0 1 0 0 16 0 1687.8417 A6NJT0 A6NJT0 329 344 UNCX Homeobox protein unc-4 homolog yes yes 2 3.178E-162 247.44 By MS/MS By MS/MS 1 1 71606000 38588000 33019000 508 476 581 1371;1372 1399;1400;1401 1401 868 3 ASPHATPSTLHFPTSPIIQQPGPYFSHPAIR RPVITGPRASPHATPS YFSHPAIRYHPQETLK R A S I R Y 3 1 0 0 0 2 0 1 3 3 1 0 0 2 7 4 3 0 1 0 0 0 31 0 3351.7153 B1AKN5;B1AKN8;Q12857;B1AKN6 B1AKN5 337 367 NFIA Nuclear factor 1;Nuclear factor 1 A-type yes no 4 0.0091268 44.564 By MS/MS By matching 1 1 13191000 7464800 5726500 509 522 582 1373;1374 1402 1402 978;6982 1 ASPITNDGEDEFVPSDGLDKDEYTFSPGK DLEELKVKASPITNDG EYTFSPGKSKATPEKS K A S G K S 1 0 1 5 0 0 3 3 0 1 1 2 0 2 3 3 2 0 1 1 0 0 29 1 3129.3938 Q02880 Q02880 1399 1427 TOP2B DNA topoisomerase 2-beta yes yes 3 0.00032311 65.375 By MS/MS By matching 1 1 103470000 46103000 57362000 510 1989 583 1375;1376 1403;1404 1403 3813;3814;7516;7517;8316 2 ASPPPQGPLPGPPGALHR GVVGARPRASPPPQGP GPPGALHRWALAVPPG R A S H R W 2 1 0 0 0 1 0 3 1 0 2 0 0 0 7 1 0 0 0 0 0 0 18 0 1744.9373 A0A087WXV6;Q96G74 A0A087WXV6 39 56 OTUD5 OTU domain-containing protein 5 yes no 2;3 0.0019963 79.837 By MS/MS By MS/MS 2 2 96425000 45743000 50682000 511 114 584 1377;1378;1379;1380 1405;1406;1407;1408 1406 201 4 ASPSPQPSSQPLQIHR NDQSPQIRASPSPQPS SQPLQIHRQTPESKNA R A S H R Q 1 1 0 0 0 3 0 0 1 1 1 0 0 0 4 4 0 0 0 0 0 0 16 0 1728.8907 B5MBZ0;Q9HC35 B5MBZ0 143 158 EML4 Echinoderm microtubule-associated protein-like 4 yes no 3 0.00015401 96.012 By MS/MS By matching 2 2 35435000 21115000 14320000 512 574 585 1381;1382;1383;1384 1409;1410 1410 1055 2 ASPVPSDPEKPGTPGEGMLSSDLDR GPEDGGVKASPVPSDP MLSSDLDRISTEELPK K A S D R I 1 1 0 3 0 0 2 3 0 0 2 1 1 0 5 4 1 0 0 1 0 0 25 1 2538.1908 O14686 O14686 1853 1877 KMT2D Histone-lysine N-methyltransferase 2D yes yes 3 7.5136E-07 114.02 By MS/MS By MS/MS 1 1 31170000 15587000 15583000 513 1454 586 1385;1386 1411;1412;1413 1412 523 7289 3 ASPVTSPAAAFPTASPANK TASVTSPKASPVTSPA PTASPANKDVSSFLET K A S N K D 6 0 1 0 0 0 0 0 0 0 0 1 0 1 4 3 2 0 0 1 0 0 19 0 1783.9105 J3KPG5;F8VU39;Q9UIF9;H0YHQ7 J3KPG5 465 483 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 0.00092953 84.327 By MS/MS By MS/MS 1 1 10448000 5367100 5081100 514 1011 587 1387;1388 1414;1415 1414 1899;1900;7152 2 ASPVTTSPTAATTQNPVLSK ________________ TQNPVLSKLLMADQDS K A S S K L 3 0 1 0 0 1 0 0 0 0 1 1 0 0 3 3 5 0 0 2 0 0 20 0 1970.032 A0A1B0GUH9;Q96JN0 A0A1B0GUH9 8 27 LCOR Ligand-dependent corepressor yes no 2 0.0041092 69.612 By matching By MS/MS 1 1 25944000 12903000 13041000 515 419 588 1389;1390 1416;1417 1416 779 2 ASQSAGDINTIYQPPEPR VSRQVRIKASQSAGDI IYQPPEPRSRHLSVSS K A S P R S 2 1 1 1 0 2 1 1 0 2 0 0 0 0 3 2 1 0 1 0 0 0 18 0 1942.9385 J3KRN4;J3QRB6;Q99759 J3KRN4 144 161 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 2 0.014073 63.184 By matching By MS/MS 1 1 14548000 7380500 7167800 516 1335 589 1391;1392 1418 1418 2472 1 ASRVPSSDEEVVEEPQSR FQDSTEPRASRVPSSD VVEEPQSRRTRMSLGT R A S S R R 1 2 0 1 0 1 4 0 0 0 0 0 0 0 2 4 0 0 0 3 0 0 18 1 1999.9447 Q9C0C2 Q9C0C2 1615 1632 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2;3 0.0003289 94.234 By MS/MS By MS/MS 2 2 109350000 45963000 63382000 517 2791 590 1393;1394;1395;1396 1419;1420;1421 1421 5809;5810 3 ASSDLPSPLEK GVKGPQDRASSDLPSP DLPSPLEKADSESNKG R A S E K A 1 0 0 1 0 0 1 0 0 0 2 1 0 0 2 3 0 0 0 0 0 0 11 0 1142.5819 Q9H161 Q9H161 194 204 ALX4 Homeobox protein aristaless-like 4 yes yes 2 0.014551 69.352 By MS/MS By matching 1 1 7427600 3964700 3462900 518 2812 591 1397;1398 1422 1422 5876 1 ASSFADMMGILK DDCVSLSKASSFADMM ADMMGILKDFHRMKQS K A S L K D 2 0 0 1 0 0 0 1 0 1 1 1 2 1 0 2 0 0 0 0 0 0 12 0 1269.6097 E9PPF9;E9PLD2;Q9H019 E9PPF9 139 150 MTFR1L Mitochondrial fission regulator 1-like yes no 2 2.3158E-06 126.5 By MS/MS By MS/MS 4 4 116060000 67595000 48461000 519 901 592;593;594 1399;1400;1401;1402;1403;1404;1405;1406 1423;1424;1425;1426;1427;1428;1429;1430 1429 340;341 1678 8 ASSFSGISILTR SMRPPVTKASSFSGIS SGISILTRGDSIGSSK K A S T R G 1 1 0 0 0 0 0 1 0 2 1 0 0 1 0 4 1 0 0 0 0 0 12 0 1237.6667 A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H0YIX9;H7C0E9 A0A0U1RRA6 337 348 R3HDM2 R3H domain-containing protein 2 yes no 2 2.3561E-09 137.95 By matching By MS/MS 1 1 49089000 29217000 19872000 520 395 595 1407;1408 1431 1431 723 1 ASSFSGISVLTR NLKPAVTKASSFSGIS SGISVLTRGDSSGSSK K A S T R G 1 1 0 0 0 0 0 1 0 1 1 0 0 1 0 4 1 0 0 1 0 0 12 0 1223.651 Q15032;H7C207;H7C1X4;H7BZ47 Q15032 379 390 R3HDM1 R3H domain-containing protein 1 yes no 2 0.00084661 99.941 By MS/MS By MS/MS 1 1 84285000 46575000 37710000 521 2120 596 1409;1410 1432;1433 1432 4189 2 ASSHSSQTQGGGSVTK TSQRSRGRASSHSSQT QGGGSVTKKRKLESTE R A S T K K 1 0 0 0 0 2 0 3 1 0 0 1 0 0 0 5 2 0 0 1 0 0 16 0 1517.707 Q3BDU5;P02545;A0A0C4DGC5;Q5TCI8 Q3BDU5 402 417 LMNA Prelamin-A/C;Lamin-A/C yes no 2 1.2349E-11 144.15 By matching By MS/MS 1 1 72300000 49475000 22825000 522 1629 597 1411;1412 1434 1434 3074;3075 1 ASSLEDLVLK PCSAPLARASSLEDLV SLEDLVLKEASTAVST R A S L K E 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 10 0 1073.5968 Q15477 Q15477 254 263 SKIV2L Helicase SKI2W yes yes 2 0.00026989 143 By MS/MS By MS/MS 1 1 379400000 206310000 173080000 523 2143 598 1413;1414 1435;1436 1435 4253 2 ASSLGEIDESSELR EPPPAPPRASSLGEID IDESSELRVLDIPGQD R A S L R V 1 1 0 1 0 0 3 1 0 1 2 0 0 0 0 4 0 0 0 0 0 0 14 0 1491.7053 Q16513 Q16513 581 594 PKN2 Serine/threonine-protein kinase N2 yes yes 2 1.0739E-20 158.31 By MS/MS By MS/MS 1 1 320660000 150120000 170540000 524 2163 599 1415;1416 1437;1438 1438 4302 2 ASSLNENVDHSALLK GVRLSLPRASSLNENV VDHSALLKLGTSVSER R A S L K L 2 0 2 1 0 0 1 0 1 0 3 1 0 0 0 3 0 0 0 1 0 0 15 0 1596.8107 D3DTX6;Q96SB3 D3DTX6 98 112 PPP1R9B Neurabin-2 yes no 2;3 1.9869E-21 160.79 By MS/MS By MS/MS 2 2 134500000 73569000 60929000 525 722 600 1417;1418;1419;1420 1439;1440;1441;1442;1443 1439 1327 5 ASSLNFLNK PPNPRMKRASSLNFLN SSLNFLNKSVEEPTQP R A S N K S 1 0 2 0 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 9 0 992.5291 Q9H0B6;A8MZ87 Q9H0B6 580 588 KLC2 Kinesin light chain 2 yes no 2 0.0042252 102.06 By MS/MS By MS/MS 1 1 200890000 106240000 94648000 526 2800 601 1421;1422 1444;1445 1445 5844;5845 2 ASSLNVLNVGGK ________________ NVLNVGGKAAEDRFQE R A S G K A 1 0 2 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 2 0 0 12 0 1157.6404 H0YJK1;H0YG16;G3V5R9 H0YJK1 5 16 KLC1 yes no 2 0.00056075 109.6 By MS/MS By MS/MS 1 1 256180000 135520000 120660000 527 1180 602 1423;1424 1446;1447 1446 2223 2 ASSLSESSPPK KPLSPDSRASSLSESS LSESSPPKAMKKFQAP R A S P K A 1 0 0 0 0 0 1 0 0 0 1 1 0 0 2 5 0 0 0 0 0 0 11 0 1088.535 Q9UHB6;F8VS07;F8VQE1;F8VRN8 Q9UHB6 367 377 LIMA1 LIM domain and actin-binding protein 1 yes no 2 2.9868E-05 124.38 By MS/MS By MS/MS 1 1 63070000 31436000 31634000 528 3003 603 1425;1426 1448;1449 1449 6318 2 ASSPAQCVTPVQTVV RSTSSSERASSPAQCV VTPVQTVV________ R A S V V - 2 0 0 0 1 2 0 0 0 0 0 0 0 0 2 2 2 0 0 4 0 0 15 0 1542.7712 Q13614 Q13614 629 643 MTMR2 Myotubularin-related protein 2 yes yes 2 0.02568 60.657 By MS/MS By matching 1 1 30052000 15898000 14154000 529 2072 604 1427;1428 1450 1450 4088 1 ASSPPDRIDIFGR RRERDRERASSPPDRI DRIDIFGRTVSKRSSL R A S G R T 1 2 0 2 0 0 0 1 0 2 0 0 0 1 2 2 0 0 0 0 0 0 13 1 1429.7314 Q9NWB6 Q9NWB6 75 87 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 3 0.00048562 91.093 By MS/MS By MS/MS 1 1 146840000 75912000 70931000 530 2931 605 1429;1430 1451;1452;1453;1454 1452 6184 4 ASSPSDIISSK RSEGMRSKASSPSDII PSDIISSKDSVVKGHS K A S S K D 1 0 0 1 0 0 0 0 0 2 0 1 0 0 1 5 0 0 0 0 0 0 11 0 1090.5506 Q9ULD9 Q9ULD9 962 972 ZNF608 Zinc finger protein 608 yes yes 2 0.0033574 85.533 By matching By MS/MS 1 1 16757000 7415200 9341800 531 3039 606 1431;1432 1455 1455 6397 1 ASSTSTPEPTR DSEPVTSKASSTSTPE TSTPEPTRKPWERTNT K A S T R K 1 1 0 0 0 0 1 0 0 0 0 0 0 0 2 3 3 0 0 0 0 0 11 0 1132.536 A0A0U1RRM6;Q8N8S7 A0A0U1RRM6 716 726 ENAH Protein enabled homolog yes no 2 0.0042329 100.93 By MS/MS By MS/MS 2 2 12199000 5785300 6413300 532 400 607 1433;1434;1435;1436 1456;1457;1458 1457 6947 2 ASSVGVLSPQK SEGSMKVKASSVGVLS VGVLSPQKKSPPTTML K A S Q K K 1 0 0 0 0 1 0 1 0 0 1 1 0 0 1 3 0 0 0 2 0 0 11 0 1071.5924 Q9UGU5 Q9UGU5 490 500 HMGXB4 HMG domain-containing protein 4 yes yes 2 0.017156 67.385 By MS/MS 1 5847700 0 5847700 533 3002 608 1437 1459 1459 6316 1 ASSVSTKESPAR SVKPAQVKASSVSTKE STKESPARKAAPAPGK K A S A R K 2 1 0 0 0 0 1 0 0 0 0 1 0 0 1 4 1 0 0 1 0 0 12 1 1218.6204 J3KQ96;E7ETY2;Q13428 J3KQ96 225 236 TCOF1 Treacle protein no no 2;3 0.00084029 112.12 By MS/MS By MS/MS 2 2 74466000 3703300 70763000 534 822;2059 609 1438;1439;1440;1441 1460;1461;1462 1461 1497 3 ASSVSTKESPARK SVKPAQVKASSVSTKE TKESPARKAAPAPGKV K A S R K A 2 1 0 0 0 0 1 0 0 0 0 2 0 0 1 4 1 0 0 1 0 0 13 2 1346.7154 J3KQ96;E7ETY2;Q13428 J3KQ96 225 237 TCOF1 Treacle protein no no 2;3 0.019381 74.853 By MS/MS By matching 2 2 95680000 62178000 33502000 535 822;2059 610 1442;1443;1444;1445 1463;1464 1464 1497 2 ASTAPGAEASPSPCITER ASTSQGRKASTAPGAE PSPCITERSKQKARRR K A S E R S 4 1 0 0 1 0 2 1 0 1 0 0 0 0 3 3 2 0 0 0 0 0 18 0 1800.8312 Q66PJ3 Q66PJ3 230 247 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes yes 2 0.015823 61.757 By MS/MS By matching 1 1 10090000 4798900 5291200 536 2290 611 1446;1447 1465 1465 4611 1 ASTASPCNNNINAATAVALQEPR PSTTKPSRASTASPCN AVALQEPRKLSYAEVC R A S P R K 6 1 4 0 1 1 1 0 0 1 1 0 0 0 2 2 2 0 0 1 0 0 23 0 2369.1394 Q71RC2 Q71RC2 593 615 LARP4 La-related protein 4 yes yes 2;3 3.842E-05 89.659 By MS/MS By MS/MS 2 2 97547000 51214000 46333000 537 2359 612 1448;1449;1450;1451 1466;1467;1468;1469;1470;1471 1467 4781;7677 6 ASTDNEELLQFPLELCSDSLPSHPFPPAK PVEKSLQRASTDNEEL SHPFPPAKAMTVEKAS R A S A K A 2 0 1 2 1 1 3 0 1 0 5 1 0 2 5 4 1 0 0 0 0 0 29 0 3238.5492 Q86YS7;H0YFC4 Q86YS7 816 844 C2CD5 C2 domain-containing protein 5 yes no 3 0.016877 55.484 By MS/MS 1 5148300 0 5148300 538 2422 613 1452 1472 1472 0 ASTPVLK KEMSLHEKASTPVLKS KASTPVLKSSTPTPRS K A S L K S 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 7 0 714.42759 Q04724 Q04724 310 316 TLE1 Transducin-like enhancer protein 1 yes yes 2 0.029959 71.692 By MS/MS 1 6054300 6054300 0 539 1998 614 1453 1473 1473 0 ASTSDYQVISDRQTPK RPLATAYKASTSDYQV ISDRQTPKKDESLVSK K A S P K K 1 1 0 2 0 2 0 0 0 1 0 1 0 0 1 3 2 0 1 1 0 0 16 1 1794.8748 Q8NFH5 Q8NFH5 295 310 NUP35 Nucleoporin NUP53 yes yes 3 0.0043264 77.506 By MS/MS By MS/MS 1 1 32636000 18903000 13732000 540 2518 615 1454;1455 1474;1475 1475 5141;7738 1 ASVQGVPLESSNNDIFLPVK QSDDSSLRASVQGVPL NDIFLPVKQKIQCQQE R A S V K Q 1 0 2 1 0 1 1 1 0 1 2 1 0 1 2 3 0 0 0 3 0 0 20 0 2113.1055 Q6P0N0;G5E9K5 Q6P0N0 182 201 MIS18BP1 Mis18-binding protein 1 yes no 2 0.00058131 109.04 By MS/MS 1 0 0 0 541 2312 616 1456 1476 1476 4662 1 ASVSPMDEPVPDSESPIEK DAKDENERASVSPMDE DSESPIEKVLSPLRSP R A S E K V 1 0 0 2 0 0 3 0 0 1 0 1 1 0 4 4 0 0 0 2 0 0 19 0 2012.9249 P46821 P46821 1375 1393 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 8.4995E-07 126.43 By MS/MS By MS/MS 7 5 157620000 83610000 74010000 542 1840 617;618;619 1457;1458;1459;1460;1461;1462;1463;1464;1465;1466;1467;1468 1477;1478;1479;1480;1481;1482;1483;1484;1485;1486;1487 1482 704 3487;3488;3489;3490 11 ASVSQTSPQSASSPR TDLLSEQKASVSQTSP PQSASSPRMESTAGIT K A S P R M 2 1 0 0 0 2 0 0 0 0 0 0 0 0 2 6 1 0 0 1 0 0 15 0 1488.7168 Q8TDY2 Q8TDY2 641 655 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 2 0.0036727 80.102 By MS/MS By matching 1 1 6142700 2711600 3431100 543 2541 620 1469;1470 1488 1488 5185 1 ASWESLDEEWR VEVLPQARASWESLDE ESLDEEWRAPQAGSRT R A S W R A 1 1 0 1 0 0 3 0 0 0 1 0 0 0 0 2 0 2 0 0 0 0 11 0 1406.6103 Q00587 Q00587 349 359 CDC42EP1 Cdc42 effector protein 1 yes yes 2 1.412E-50 204.32 By MS/MS 2 11880000 0 11880000 544 1974 621;622 1471;1472 1489;1490 1489 3776;3777 2 ASYHFSPEELDENTSPLLGDAR VEGTPLPKASYHFSPE SPLLGDARFQKSPPDL K A S A R F 2 1 1 2 0 0 3 1 1 0 3 0 0 1 2 3 1 0 1 0 0 0 22 0 2447.1241 H0YAY0;E5RJU4;E5RFM9;R4GMT7;E7EVI4;E7ET87;O75410 H0YAY0 37 58 TACC1 Transforming acidic coiled-coil-containing protein 1 yes no 2;3 8.6842E-06 104.49 By MS/MS By MS/MS 2 2 72943000 32549000 40394000 545 1159 623 1473;1474;1475;1476 1491;1492;1493 1493 2200;7211 3 ATAGDTHLGGEDFDNR DDGIFEVKATAGDTHL GGEDFDNRLVNHFVEE K A T N R L 2 1 1 3 0 0 1 3 1 0 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1674.7234 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37;P17066;P48741 A0A0G2JIW1 222 237 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 3 0.03058 50.102 By matching By MS/MS 1 1 34685000 17194000 17492000 546 351;1711 624 1477;1478 1494 1494 0 ATAPQTQHVSPMR EKSSPGHRATAPQTQH TQHVSPMRQVEPPAKK R A T M R Q 2 1 0 0 0 2 0 0 1 0 0 0 1 0 2 1 2 0 0 1 0 0 13 0 1422.7038 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;E9PPR1;E9PL12;E9PK06 E9PL71 100 112 EEF1D Elongation factor 1-delta yes no 2;3 0.00057591 87.216 By matching By MS/MS 2 2 359530000 192180000 167350000 547 172 625 1479;1480;1481;1482 1495;1496 1496 279 2 ATAPQTQHVSPMRQVEPPAK EKSSPGHRATAPQTQH RQVEPPAKKPATPAED R A T A K K 3 1 0 0 0 3 1 0 1 0 0 1 1 0 4 1 2 0 0 2 0 0 20 1 2172.111 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;E9PPR1;E9PL12;E9PK06 E9PL71 100 119 EEF1D Elongation factor 1-delta yes no 3 0.020386 47.204 By MS/MS By MS/MS 2 2 165570000 97924000 67644000 548 172 626 1483;1484;1485;1486 1497;1498 1498 75 279 2 ATDEDMQSLASLMSMK CIFLREGKATDEDMQS LASLMSMKQADIGNLD K A T M K Q 2 0 0 2 0 1 1 0 0 0 2 1 3 0 0 3 1 0 0 0 0 0 16 0 1756.7682 Q8NDI1;C9K0H9;B5MC86 Q8NDI1 164 179 EHBP1 EH domain-binding protein 1 yes no 2 0.021741 47.113 By MS/MS By MS/MS 1 1 10627000 4363700 6263100 549 2509 627 1487;1488 1499;1500 1500 1011;1012 5122;5123 2 ATDIPASASPPPVAGVPFFK QGSGSSPKATDIPASA VAGVPFFKQSPGHQSP K A T F K Q 4 0 0 1 0 0 0 1 0 1 0 1 0 2 5 2 1 0 0 2 0 0 20 0 1968.0357 Q8N1G0;F8WCX2 Q8N1G0 245 264 ZNF687 Zinc finger protein 687 yes no 2;3 0.002481 75.017 By MS/MS By MS/MS 2 1 89918000 66669000 23249000 550 2458 628 1489;1490;1491 1501;1502;1503 1503 5024 3 ATEDGEEDEVSAGEK SSQASKSKATEDGEED DEVSAGEKEQDSDESY K A T E K E 2 0 0 2 0 0 5 2 0 0 0 1 0 0 0 1 1 0 0 1 0 0 15 0 1564.6377 Q9BXW9 Q9BXW9 1425 1439 FANCD2 Fanconi anemia group D2 protein yes yes 2 3.2518E-54 197.17 By MS/MS By MS/MS 1 1 88947000 48620000 40327000 551 2775 629 1492;1493 1504;1505;1506 1505 5774 3 ATFFAVTYQIPNTQK QGSPVEPKATFFAVTY YQIPNTQKAKGVVLSG K A T Q K A 2 0 1 0 0 2 0 0 0 1 0 1 0 2 1 0 3 0 1 1 0 0 15 0 1727.8883 Q9BY89 Q9BY89 1025 1039 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 8.6156E-05 122.33 By MS/MS By MS/MS 1 1 10034000 5073200 4960800 552 2777 630 1494;1495 1507;1508;1509 1507 8453 3 ATFHFSGAQTSSCIR A T I R 2 1 0 0 1 1 0 1 1 1 0 0 0 2 0 3 2 0 0 0 0 0 15 0 1668.7678 REV__E9PHY8 yes no 2 0.012135 59.673 By MS/MS By matching 1 1 168210000 89628000 78580000 + 553 3177 631 1496;1497 1510 1510 6770;6771;6772 1 ATGAALTPTEER LDLSDRHRATGAALTP ALTPTEERRTSFSTSD R A T E R R 3 1 0 0 0 0 2 1 0 0 1 0 0 0 1 0 3 0 0 0 0 0 12 0 1215.6095 M0R0P8;Q13459;M0R300 M0R0P8 1340 1351 MYO9B Unconventional myosin-IXb yes no 2 2.8931E-24 156.08 By MS/MS 1 0 0 0 554 1419 632 1498 1511 1511 7275 1 ATGDGSSPELPSLER QSIRKKRRATGDGSSP PELPSLERKNKRRKIK R A T E R K 1 1 0 1 0 0 2 2 0 0 2 0 0 0 2 3 1 0 0 0 0 0 15 0 1514.7213 Q9H2Y7;A0A0C4DGM5;H3BS99 Q9H2Y7 1020 1034 ZNF106 Zinc finger protein 106 yes no 2 1.7638E-07 133.23 By MS/MS By MS/MS 1 1 18147000 8322300 9824600 555 2824 633 1499;1500 1512;1513 1513 5917;5918 2 ATGGLCLLGAYADSDDDDNDVSEK TTRPTAVKATGGLCLL DDNDVSEKLAQSKETN K A T E K L 3 0 1 6 1 0 1 3 0 0 3 1 0 0 0 2 1 0 1 1 0 0 24 0 2500.0548 Q8N3X1 Q8N3X1 103 126 FNBP4 Formin-binding protein 4 yes yes 2;3 8.8686E-07 105.22 By MS/MS By MS/MS 2 2 41378000 20179000 21200000 556 2469 634 1501;1502;1503;1504 1514;1515;1516 1516 5046 3 ATGNDLRPPPPSPSSDLTHPMK KKASTLWRATGNDLRP SDLTHPMKTSHPVVAS R A T M K T 1 1 1 2 0 0 0 1 1 0 2 1 1 0 6 3 2 0 0 0 0 0 22 1 2314.1376 A0A075B784;Q9P275 A0A075B784 702 723 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 3 0.011737 64.545 By MS/MS 1 0 0 0 557 19 635 1505 1517 1517 7 35 1 ATGNQPPPLVGTYNTLLSR QPSTSTFKATGNQPPP TYNTLLSRTDSCSSAQ K A T S R T 1 1 2 0 0 1 0 2 0 0 3 0 0 0 3 1 3 0 1 1 0 0 19 0 1998.0534 Q96PD2 Q96PD2 703 721 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 yes yes 2;3 2.7585E-24 161.1 By MS/MS By MS/MS 2 1 44708000 27621000 17087000 558 2693 636 1506;1507;1508 1518;1519;1520 1519 5564;8430 3 ATISDEEIER LPSASTSKATISDEEI ISDEEIERQLKALGVD K A T E R Q 1 1 0 1 0 0 3 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 10 0 1161.5513 C9J0A7;Q9UQN3 C9J0A7 166 175 CHMP2B Charged multivesicular body protein 2b yes no 2 0.0038897 85.973 By MS/MS By MS/MS 1 1 577010000 267800000 309210000 559 622 637 1509;1510 1521;1522 1522 1146 2 ATLLNVPDLSDSIHSANASER MVVQRDERATLLNVPD HSANASERDDISEIQS R A T E R D 3 1 2 2 0 0 1 0 1 1 3 0 0 0 1 4 1 0 0 1 0 0 21 0 2209.0975 A0A087X0K9;G5E9E7;G3V1L9;Q07157;H0YKB1 A0A087X0K9 254 274 TJP1 Tight junction protein ZO-1 yes no 2;3 0.00071482 93.5 By MS/MS By MS/MS 4 3 77934000 39204000 38730000 560 156 638;639 1511;1512;1513;1514;1515;1516;1517 1523;1524;1525;1526;1527 1527 251;252;253 4 ATLPSPDKLPGFK DSRLEELKATLPSPDK PDKLPGFKMYPIDFEK K A T F K M 1 0 0 1 0 0 0 1 0 0 2 2 0 1 3 1 1 0 0 0 0 0 13 1 1369.7606 P22314;Q5JRR6 P22314 831 843 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2;3 0.022809 71.031 By MS/MS By MS/MS 1 1 8214400 0 8214400 561 1747 640 1518;1519 1528;1529 1529 3287 2 ATLSSIR TTINKNARATLSSIRH RATLSSIRHMIRKNKY R A T I R H 1 1 0 0 0 0 0 0 0 1 1 0 0 0 0 2 1 0 0 0 0 0 7 0 746.42865 H0YKD8;P46779 H0YKD8 88 94 RPL28 60S ribosomal protein L28 yes no 2 8.6182E-13 151.17 By MS/MS By MS/MS 1 1 2495600 0 2495600 562 1199 641 1520;1521 1530;1531 1530 2 ATNESEDEIPQLVPIGK GRGKAQVKATNESEDE PQLVPIGKKTPANEKV K A T G K K 1 0 1 1 0 1 3 1 0 2 1 1 0 0 2 1 1 0 0 1 0 0 17 0 1838.9262 O76021;J3QSV6 O76021 357 373 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2;3 8.1699E-107 227.09 By MS/MS By MS/MS 4 4 2253000000 1196400000 1056600000 563 1562 642;643 1522;1523;1524;1525;1526;1527;1528;1529 1532;1533;1534;1535;1536;1537;1538;1539;1540;1541;1542 1533 62 2952;7345 11 ATNESEDEIPQLVPIGKK GRGKAQVKATNESEDE QLVPIGKKTPANEKVE K A T K K T 1 0 1 1 0 1 3 1 0 2 1 2 0 0 2 1 1 0 0 1 0 0 18 1 1967.0211 O76021;J3QSV6 O76021 357 374 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2;3 0.0036241 77.554 By MS/MS By MS/MS 2 2 79726000 38288000 41438000 564 1562 644 1530;1531;1532;1533 1543;1544;1545;1546 1546 2952;7345 4 ATPATAPGTSPR VPGKRLPRATPATAPG TAPGTSPRANGLSVER R A T P R A 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 1 3 0 0 0 0 0 12 0 1125.5778 H0Y873;Q96P47 H0Y873 20 31 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 2 0.00039322 113.44 By matching By MS/MS 1 1 8947500 3750700 5196800 565 1145 645 1534;1535 1547 1547 2175 1 ATPPPSPLLSELLK QKKMLGQKATPPPSPL PLLSELLKKGSLLPTS K A T L K K 1 0 0 0 0 0 1 0 0 0 4 1 0 0 4 2 1 0 0 0 0 0 14 0 1461.8443 H7C128;H7C179;H7C127 H7C128 254 267 BRD8 yes no 2 0.019307 65.574 By MS/MS 1 2886900 0 2886900 566 1273 646 1536 1548 1548 2358;2359;7230 1 ATPPPSPLLSELLKK QKKMLGQKATPPPSPL LLSELLKKGSLLPTSP K A T K K G 1 0 0 0 0 0 1 0 0 0 4 2 0 0 4 2 1 0 0 0 0 0 15 1 1589.9392 H7C128;H7C179;H7C127 H7C128 254 268 BRD8 yes no 3 0.00059284 83.948 By MS/MS By MS/MS 1 1 9287100 5177300 4109800 567 1273 647 1537;1538 1549;1550;1551 1549 2358;2359;7230 3 ATPTKAPAPVVLGSPVVLGPPVGQAR NHRQTHLRATPTKAPA GPPVGQARVAVEHSYR R A T A R V 4 1 0 0 0 1 0 3 0 0 2 1 0 0 6 1 2 0 0 5 0 0 26 1 2478.4322 A0A0C4DFM2;Q6ZN55 A0A0C4DFM2 241 266 ZNF574 Zinc finger protein 574 yes no 3 0.029022 44.474 By MS/MS 1 3657300 3657300 0 568 294 648 1539 1552 1552 1 ATSDTLESPPKIIPK RQTRSKRKATSDTLES SPPKIIPKYISENESP K A T P K Y 1 0 0 1 0 0 1 0 0 2 1 2 0 0 3 2 2 0 0 0 0 0 15 1 1595.877 O94782 O94782 306 320 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 2 0.0013448 103.66 By MS/MS By MS/MS 1 1 34117000 17751000 16366000 569 1566 649 1540;1541 1553;1554 1553 2964 2 ATSEEDVSIKSPICEK ENQSHDYKATSEEDVS IKSPICEKQDESNTVI K A T E K Q 1 0 0 1 1 0 3 0 0 2 0 2 0 0 1 3 1 0 0 1 0 0 16 1 1791.856 Q5UIP0 Q5UIP0 1606 1621 RIF1 Telomere-associated protein RIF1 yes yes 2;3 4.2266E-64 199.61 By MS/MS By MS/MS 2 2 170640000 73930000 96713000 570 2261 650 1542;1543;1544;1545 1555;1556;1557;1558 1555 4519;4520 4 ATSHAGLSSAPHHMAQRSQK NFLTASHRATSHAGLS HMAQRSQKSRSEQDLL R A T Q K S 4 1 0 0 0 2 0 1 3 0 1 1 1 0 1 4 1 0 0 0 0 0 20 1 2101.0236 D6RBD3;Q3KP44 D6RBD3 410 429 ANKRD55 Ankyrin repeat domain-containing protein 55 yes no 2 0.02876 49.929 By MS/MS 1 0 0 0 571 750 651 1546 1559 1559 286 1 ATSNVFAMFDQSQIQEFK TTKKRPQRATSNVFAM QSQIQEFKEAFNMIDQ R A T F K E 2 0 1 1 0 3 1 0 0 1 0 1 1 3 0 2 1 0 0 1 0 0 18 0 2089.9779 O14950;J3QRS3;P19105;J3KTJ1;P24844 O14950 18 35 MYL12B;MYL12A;MYL9 Myosin regulatory light chain 12B;Myosin regulatory light chain 12A;Myosin regulatory light polypeptide 9 yes no 2;3 3.2451E-78 205.98 By MS/MS By MS/MS 3 2 243130000 125170000 117960000 572 1462 652;653 1547;1548;1549;1550;1551 1560;1561;1562;1563;1564 1563 525 2717;7293 5 ATSPLVSLYPALECR QFSAGADRATSPLVSL LYPALECRALIQQMSP R A T C R A 2 1 0 0 1 0 1 0 0 0 3 0 0 0 2 2 1 0 1 1 0 0 15 0 1675.8603 A0A087WXV6;Q96G74;H7BZQ3 A0A087WXV6 477 491 OTUD5 OTU domain-containing protein 5 yes no 2 0.021381 73.435 By MS/MS 1 42501000 42501000 0 573 114 654 1552 1565 1565 1 ATSPSSSVSGDFDDGHHSVSTPGPSR ________________ VSTPGPSRKRRRLSNL R A T S R K 1 1 0 3 0 0 0 3 2 0 0 0 0 1 3 8 2 0 0 2 0 0 26 0 2570.127 E7EVG2;Q86U86;C9JCJ2;C9J053;C9JQF1;C9JPI5;C9J409 E7EVG2 8 33 PBRM1 Protein polybromo-1 yes no 3 0.00065548 65.189 By MS/MS By matching 1 1 35863000 21427000 14437000 574 829 655 1553;1554 1566 1566 1543 1 ATSSSNPSSPAPDWYK SLKLEESKATSSSNPS SPAPDWYKDFVTDADA K A T Y K D 2 0 1 1 0 0 0 0 0 0 0 1 0 0 3 5 1 1 1 0 0 0 16 0 1693.7584 P46100 P46100 1988 2003 ATRX Transcriptional regulator ATRX yes yes 2 0.00065035 93.427 By MS/MS By MS/MS 1 1 11784000 6211000 5573100 575 1837 656 1555;1556 1567;1568 1568 3473;3474 1 ATSSSSGSLSATGR SSRVTVSRATSSSSGS GSLSATGRLGRSKRKR R A T G R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 0 6 2 0 0 0 0 0 14 0 1267.6004 Q03252 Q03252 417 430 LMNB2 Lamin-B2 yes yes 2 0.00074165 113.37 By MS/MS By MS/MS 1 1 28841000 16470000 12371000 576 1995 657 1557;1558 1569;1570;1571 1570 3846 3 ATSTATSGFAGAIGQK VSANHTSRATSTATSG FAGAIGQKLPPFSYAY R A T Q K L 4 0 0 0 0 1 0 3 0 1 0 1 0 1 0 2 3 0 0 0 0 0 16 0 1466.7365 E7EPL9;E7ER27;G5E9S2;E7ET17;E7EWE5;P51659 E7EPL9 54 69 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 2 0.0064489 74.853 By MS/MS By MS/MS 1 1 15606000 8466000 7140000 577 801 658 1559;1560 1572;1573 1573 1428 2 ATSVALPGWSPSETR ENVPGRSKATSVALPG GWSPSETRSSFMSRTS K A T T R S 2 1 0 0 0 0 1 1 0 0 1 0 0 0 2 3 2 1 0 1 0 0 15 0 1557.7787 Q16513;B1AL79 Q16513 351 365 PKN2 Serine/threonine-protein kinase N2 yes no 2 1.3121E-15 146.27 By MS/MS By MS/MS 1 1 33394000 17048000 16346000 578 2163 659 1561;1562 1574;1575 1575 4303 1 ATTPASTANSDVATIPTDTPLKEENEGFVK DVSQGGSKATTPASTA EENEGFVKVTDAPNKS K A T V K V 4 0 2 2 0 0 3 1 0 1 1 2 0 1 3 2 6 0 0 2 0 0 30 1 3103.5197 O60271;A0A087X2D8 O60271 274 303 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 3 7.8339E-07 80.813 By MS/MS By MS/MS 2 2 90412000 47869000 42543000 579 1514 660 1563;1564;1565;1566 1576;1577;1578 1576 7324;7325;7326 3 ATTPPNQGRPDSPVYANLQELK SSSTEQIRATTPPNQG YANLQELKISQSALPP R A T L K I 2 1 2 1 0 2 1 1 0 0 2 1 0 0 4 1 2 0 1 1 0 0 22 1 2395.2132 Q1RLN5;Q8IWW6 Q1RLN5 229 250 ARHGAP12 Rho GTPase-activating protein 12 yes no 3 0.00025024 80.362 By MS/MS By MS/MS 1 1 41425000 19598000 21827000 580 2174 661 1567;1568 1579;1580 1580 4323;7617;8358 2 ATTPQLTDVSEDLDQQSLPSEPEETLSR SGGFSVSRATTPQLTD EPEETLSRDLGEGEEG R A T S R D 1 1 0 3 0 3 4 0 0 0 4 0 0 0 3 4 4 0 0 1 0 0 28 0 3085.4575 Q8NC44;H7C3D5;C9JIF3 Q8NC44 328 355 FAM134A Protein FAM134A yes no 3 0.0024904 56.914 By matching By MS/MS 1 1 34774000 18521000 16253000 581 2497 662 1569;1570 1581;1582 1581 7729 2 ATVTPSPVK KMPKPRLKATVTPSPV TVTPSPVKGKGKVGRP K A T V K G 1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 1 2 0 0 2 0 0 9 0 898.51238 Q9H1E3 Q9H1E3 176 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 0.0012204 131.09 By MS/MS By MS/MS 2 2 1274200000 666550000 607650000 582 2816 663;664 1571;1572;1573;1574 1583;1584;1585;1586;1587 1587 5890;7847 4 ATVTPSPVKGK KMPKPRLKATVTPSPV TPSPVKGKGKVGRPTA K A T G K G 1 0 0 0 0 0 0 1 0 0 0 2 0 0 2 1 2 0 0 2 0 0 11 1 1083.6288 Q9H1E3 Q9H1E3 176 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 1.436E-05 139.19 By MS/MS By MS/MS 3 3 1838500000 944920000 893590000 583 2816 665;666 1575;1576;1577;1578;1579;1580 1588;1589;1590;1591;1592;1593;1594;1595 1593 5890;7847 8 ATYINLKPAR NPEAEEMKATYINLKP YINLKPARKYRFH___ K A T A R K 2 1 1 0 0 0 0 0 0 1 1 1 0 0 1 0 1 0 1 0 0 0 10 1 1145.6557 Q9H467 Q9H467 273 282 CUEDC2 CUE domain-containing protein 2 yes yes 2 0.0083041 69.812 By MS/MS 1 1778400 1778400 0 584 2832 667 1581 1596 1596 8460 0 AVAEEDNGSIGEETDSSPGR IPHLAGKKAVAEEDNG ETDSSPGRKKFPLKIF K A V G R K 2 1 1 2 0 0 4 3 0 1 0 0 0 0 1 3 1 0 0 1 0 0 20 0 2018.8665 E9PNJ4;G0XQ39;Q13586 E9PNJ4 479 498 STIM1 Stromal interaction molecule 1 yes no 2 0.02504 56.527 By MS/MS 1 3795200 0 3795200 585 916 668 1582 1597 1597 1704 1 AVAGVMITASHNR PYAVQKLKAVAGVMIT MITASHNRKEDNGYKV K A V N R K 3 1 1 0 0 0 0 1 1 1 0 0 1 0 0 1 1 0 0 2 0 0 13 0 1325.6874 Q6PCE3 Q6PCE3 166 178 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 2 0.0019053 88.092 By MS/MS By MS/MS 1 1 7730100 7730100 0 586 2326 669 1583;1584 1598;1599 1598 934 4689 2 AVAQALEVIPR GVEQWPYRAVAQALEV QALEVIPRTLIQNCGA R A V P R T 3 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 2 0 0 11 0 1165.6819 B4DUR8;P49368 B4DUR8 394 404 CCT3 T-complex protein 1 subunit gamma yes no 2 0.0045553 104.22 By MS/MS By MS/MS 1 1 2620700 2620700 0 587 565 670 1585;1586 1600;1601 1600 2 AVASPEATVSQTDENK EGDLFKEKAVASPEAT VSQTDENKARAEKKVT K A V N K A 3 0 1 1 0 1 2 0 0 0 0 1 0 0 1 2 2 0 0 2 0 0 16 0 1645.7795 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6;A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1 F8W7U3 407 422 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 2 0.0021298 85.473 By MS/MS By matching 1 1 32420000 17665000 14755000 588 814;183 671 1587;1588 1602 1602 307 1 AVASSPAATNSEVK APSEGSPKAVASSPAA AATNSEVKMTSFAERK K A V V K M 4 0 1 0 0 0 1 0 0 0 0 1 0 0 1 3 1 0 0 2 0 0 14 0 1330.6729 Q9P1Y5 Q9P1Y5 550 563 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.00048315 115.1 By MS/MS By MS/MS 1 1 9669500 4675900 4993600 589 2968 672 1589;1590 1603;1604 1603 6250 2 AVDKPPSPSPIEMK NGSLCLEKAVDKPPSP SPSPIEMKKASNPVEV K A V M K K 1 0 0 1 0 0 1 0 0 1 0 2 1 0 4 2 0 0 0 1 0 0 14 1 1494.7752 Q9H165;A0A0J9YXG2;A0A0J9YYJ9 Q9H165 80 93 BCL11A B-cell lymphoma/leukemia 11A yes no 2;3 0.01168 74.698 By MS/MS By MS/MS 2 2 22404000 12036000 10369000 590 2813 673 1591;1592;1593;1594 1605;1606;1607 1607 1113 5877 3 AVDSLVPIGR EPMQTGIKAVDSLVPI DSLVPIGRGQRELIIG K A V G R G 1 1 0 1 0 0 0 1 0 1 1 0 0 0 1 1 0 0 0 2 0 0 10 0 1025.5869 P25705;K7EK77;K7ENJ4;K7ERX7 P25705 195 204 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 2 0.00025398 118.33 By MS/MS By MS/MS 1 1 10849000 5438200 5410600 591 1764 674 1595;1596 1608;1609 1609 2 AVELAANTK SDGVATEKAVELAANT VELAANTKGICFIRTS K A V T K G 3 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 915.50255 A0A0B4J1R6;P29401 A0A0B4J1R6 291 299 TKT Transketolase yes no 2 0.013086 84.743 By MS/MS By matching 1 1 3225000 1941300 1283600 592 285 675 1597;1598 1610 1610 1 AVEQEDELSDVSQGGSK SNSPEPQKAVEQEDEL DVSQGGSKATTPASTA K A V S K A 1 0 0 2 0 2 3 2 0 0 1 1 0 0 0 3 0 0 0 2 0 0 17 0 1776.8014 O60271;D6RHI8 O60271 257 273 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2 0.020658 57.798 By matching By MS/MS 1 1 11012000 4389300 6623000 593 1514 676 1599;1600 1611 1611 2848;2849 1 AVFPSIVGR FAGDDAPRAVFPSIVG VFPSIVGRPRHQGVMV R A V G R P 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 2 0 0 9 0 944.54435 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8;C9JUM1;C9JZR7;Q6S8J3;C9JTX5;A5A3E0;P0CG38;F8WCH0;P68133;P68032;A6NL76;P63267;P62736;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 29 37 ACTG1;ACTB;POTEE;POTEF;POTEI;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle no no 2 0.010201 87.181 By MS/MS By MS/MS 1 1 32054000 17791000 14263000 594 1928;1955 677 1601;1602 1612;1613 1613 2 AVFPSIVGRPR FAGDDAPRAVFPSIVG PSIVGRPRHQGVMVGM R A V P R H 1 2 0 0 0 0 0 1 0 1 0 0 0 1 2 1 0 0 0 2 0 0 11 1 1197.6982 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8;C9JUM1;C9JZR7;Q6S8J3;C9JTX5;A5A3E0;P0CG38;F8WCH0;P68133;P68032;A6NL76;P63267;P62736;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 29 39 ACTG1;ACTB;POTEE;POTEF;POTEI;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle no no 3 0.0081076 70.399 By MS/MS 1 0 0 0 595 1928;1955 678 1603 1614 1614 1 AVFVDLEPTVIDEVR GAGKHVPRAVFVDLEP PTVIDEVRTGTYRQLF R A V V R T 1 1 0 2 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 4 0 0 15 0 1700.8985 F5H5D3;Q9BQE3;F8VVB9;F8VRZ4;F8VS66;F8VRK0;F8VX09;F8VWV9;P68363;Q71U36;F8VQQ4 P68363 135 149 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 2 3.1077E-130 242.45 By MS/MS 1 74372000 0 74372000 596 976;1957;2360 679 1604 1615 1615 1 AVGAQASVGSRSEGEGEAASADDGSLNTSGAGPK NPEGAEDRAVGAQASV NTSGAGPKSWQVPPPA R A V P K S 7 1 1 2 0 1 3 7 0 0 1 1 0 0 1 6 1 0 0 2 0 0 34 1 3089.4134 M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;M0R2I2;J3KQS6;Q9NWV8 M0QXG9 38 71 BABAM1 BRISC and BRCA1-A complex member 1 yes no 3 0.0023027 51.234 By MS/MS 1 14371000 0 14371000 597 1330 680 1605 1616 1616 2466 1 AVGMPSPVSPK PSPGLGSKAVGMPSPV MPSPVSPKLSPGNSGN K A V P K L 1 0 0 0 0 0 0 1 0 0 0 1 1 0 3 2 0 0 0 2 0 0 11 0 1068.5638 Q9UHB7 Q9UHB7 1050 1060 AFF4 AF4/FMR2 family member 4 yes yes 2 1.1318E-05 131.12 By MS/MS By MS/MS 4 3 80604000 40370000 40234000 598 3004 681;682;683 1606;1607;1608;1609;1610;1611;1612 1617;1618;1619;1620;1621;1622;1623;1624;1625 1621 1194 6326;6327 7 AVGNGAAEISLKSPR DFPKEGVKAVGNGAAE EISLKSPRELPSASTS K A V P R E 3 1 1 0 0 0 1 2 0 1 1 1 0 0 1 2 0 0 0 1 0 0 15 1 1468.7998 Q5T481 Q5T481 968 982 RBM20 RNA-binding protein 20 yes yes 2 0.0086482 93.181 By MS/MS By MS/MS 2 2 13886000 6982400 6904000 599 2239 684 1613;1614;1615;1616 1626;1627;1628 1628 4484;4485 1 AVIVSSPK SSSKPSIKAVIVSSPK AVIVSSPKAKATVSKT K A V P K A 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 2 0 0 0 2 0 0 8 0 799.48035 Q14966 Q14966 1396 1403 ZNF638 Zinc finger protein 638 yes yes 2 0.012368 129.85 By MS/MS By MS/MS 1 1 83878000 48197000 35681000 600 2110 685 1617;1618 1629;1630 1629 4174 2 AVIYNPATQADWTAK ERYLFVDRAVIYNPAT TQADWTAKKLVWIPSE R A V A K K 4 0 1 1 0 1 0 0 0 1 0 1 0 0 1 0 2 1 1 1 0 0 15 0 1647.8257 P35580;E7ERA5 P35580 19 33 MYH10 Myosin-10 yes no 2 0.0031448 88.338 By MS/MS By matching 1 1 10428000 5753600 4674800 601 1796 686 1619;1620 1631 1631 8257 1 AVLASQTSLTPLGR LSNLSERRAVLASQTS TSLTPLGRNGRSIPAT R A V G R N 2 1 0 0 0 1 0 1 0 0 3 0 0 0 1 2 2 0 0 1 0 0 14 0 1412.7987 E7EPP7;Q6ZWJ1 E7EPP7 434 447 STXBP4 Syntaxin-binding protein 4 yes no 2 0.00071913 113.52 By MS/MS By MS/MS 1 1 34884000 20713000 14171000 602 804 687 1621;1622 1632;1633 1632 1436;7076 2 AVLFCLSEDKK EEVKKRKKAVLFCLSE FCLSEDKKNIILEEGK K A V K K N 1 0 0 1 1 0 1 0 0 0 2 2 0 1 0 1 0 0 0 1 0 0 11 1 1308.6748 E9PS23;E9PP50;P23528;E9PLJ3;E9PQB7;G3V1A4;E9PK25 E9PS23 35 45 CFL1 Cofilin-1 yes no 3 0.012611 83.499 By MS/MS 1 0 0 0 603 919 688 1623 1634 1634 1 AVLSDSPQLSEGK HLVEEVARAVLSDSPQ SPQLSEGKEIKLEELI R A V G K E 1 0 0 1 0 1 1 1 0 0 2 1 0 0 1 3 0 0 0 1 0 0 13 0 1329.6776 Q5VY60;Q7Z4H7;Q5SYF9 Q5VY60 411 423 HAUS6 HAUS augmin-like complex subunit 6 yes no 2 3.8886E-10 141.59 By MS/MS By MS/MS 1 1 69429000 38172000 31258000 604 2280 689 1624;1625 1635;1636 1635 4579 2 AVLVDLEPGTMDSVR TGGKYVPRAVLVDLEP PGTMDSVRSGPFGQIF R A V V R S 1 1 0 2 0 0 1 1 0 0 2 0 1 0 1 1 1 0 0 3 0 0 15 0 1600.8131 P68371;P04350;Q3ZCM7;M0QY85;M0QZL7;M0R278;M0R0X0;M0QY37;M0QX14;A0A075B724 P68371 63 77 TUBB4B;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain yes no 2 0.0062614 84.821 By matching By MS/MS 1 1 20722000 9471800 11250000 605 1958 690 1626;1627 1637 1637 771 1 AVLYADYR HEDRPSSRAVLYADYR AVLYADYRAPGPARFD R A V Y R A 2 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 8 0 969.49198 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 433 440 KIRREL Kin of IRRE-like protein 1 yes no 2 0.019654 68.787 By matching By MS/MS 1 1 18903000 8865200 10037000 606 553 691 1628;1629 1638 1638 8069 0 AVMDDFAAFVEK KATKEQLKAVMDDFAA DFAAFVEKCCKADDKE K A V E K C 3 0 0 2 0 0 1 0 0 0 0 1 1 2 0 0 0 0 0 2 0 0 12 0 1341.6275 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;H0YA55;D6RHD5;A0A087WWT3 B7WNR0 455 466 ALB Serum albumin yes no 2 0.0029193 93.058 By MS/MS By matching 1 1 28103000 17164000 10939000 + 607 314 692 1630;1631 1639 1639 1 AVMDDFAAFVEKCCK KATKEQLKAVMDDFAA AFVEKCCKADDKETCF K A V C K A 3 0 0 2 2 0 1 0 0 0 0 2 1 2 0 0 0 0 0 2 0 0 15 1 1789.7837 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;H0YA55;D6RHD5;A0A087WWT3 B7WNR0 455 469 ALB Serum albumin yes no 3 0.0027101 88.075 By MS/MS 1 3133300 3133300 0 + 608 314 693 1632 1640 1640 1 AVNTQALSGAGILR LESSELPRAVNTQALS LSGAGILRMVNKAADA R A V L R M 3 1 1 0 0 1 0 2 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1369.7678 O60749 O60749 270 283 SNX2 Sorting nexin-2 yes yes 2 5.4791E-07 130.01 By matching By MS/MS 1 1 13462000 8367000 5094500 609 1525 694 1633;1634 1641 1641 2878 1 AVPIAVADEGESESEDDDLKPR PPPSHPLKAVPIAVAD EDDDLKPRGLTGMKNL K A V P R G 3 1 0 4 0 0 4 1 0 1 1 1 0 0 2 2 0 0 0 2 0 0 22 1 2341.0921 Q9Y2K6 Q9Y2K6 121 142 USP20 Ubiquitin carboxyl-terminal hydrolase 20 yes yes 2;3 0.00021681 85.45 By MS/MS By MS/MS 4 4 109050000 55996000 53050000 610 3093 695;696 1635;1636;1637;1638;1639;1640;1641;1642 1642;1643;1644;1645;1646 1643 6638;6639 4 AVPIGTPPK IIGSPPVRAVPIGTPP VPIGTPPKQMAVPSFT R A V P K Q 1 0 0 0 0 0 0 1 0 1 0 1 0 0 3 0 1 0 0 1 0 0 9 0 878.52255 Q86TB9 Q86TB9 189 197 PATL1 Protein PAT1 homolog 1 yes yes 2 0.017514 76.228 By matching By MS/MS 1 1 20738000 11481000 9256500 611 2397 697 1643;1644 1647 1647 0 AVPMAPAPASPGSSNDSSAR PCEFEHRKAVPMAPAP SSNDSSARSQERAGGL K A V A R S 5 1 1 1 0 0 0 1 0 0 0 0 1 0 4 5 0 0 0 1 0 0 20 0 1868.8687 Q66K74 Q66K74 750 769 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 2 0.011328 52.731 By matching By MS/MS 1 1 41608000 20869000 20739000 612 2289 698 1645;1646 1648;1649 1649 915 4605;4606;4607 2 AVPPVSPELR TLSPEHWKAVPPVSPE PPVSPELRKPGPPLSP K A V L R K 1 1 0 0 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 0 1063.6026 Q96JM3 Q96JM3 411 420 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0028456 89.805 By MS/MS By MS/MS 1 2 124360000 56869000 67488000 613 2674 699 1647;1648;1649 1650;1651;1652;1653;1654;1655;1656;1657;1658;1659;1660;1661;1662;1663 1661 5508 14 AVPSPTTGEEGSVHSR ENVSEALRAVPSPTTG EEGSVHSREAKESSAA R A V S R E 1 1 0 0 0 0 2 2 1 0 0 0 0 0 2 3 2 0 0 2 0 0 16 0 1609.7696 Q5SYE7 Q5SYE7 1230 1245 NHSL1 NHS-like protein 1 yes yes 3 0.01862 59.884 By matching By MS/MS 1 1 12603000 6454200 6148500 614 2233 700 1650;1651 1664 1664 4470 0 AVQQHQHGYDSDEEVDSELGTWEHQLR DMQLLWEKAVQQHQHG GTWEHQLRRMEMDKTR K A V L R R 1 1 0 3 0 4 4 2 3 0 2 0 0 0 0 2 1 1 1 2 0 0 27 0 3192.4133 Q8IWZ8 Q8IWZ8 475 501 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 3;4 3.3065E-12 134.86 By MS/MS By MS/MS 2 2 78644000 45144000 33500000 615 2432 701 1652;1653;1654;1655 1665;1666;1667;1668 1668 4975 4 AVSEEQQPALK PEKNRINKAVSEEQQP EEQQPALKGKKGKEEK K A V L K G 2 0 0 0 0 2 2 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 11 0 1198.6194 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 165 175 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2 0.0011927 105.25 By MS/MS By matching 1 1 156170000 83286000 72888000 616 2232 702 1656;1657 1669 1669 4465 1 AVSETPAVPPVSEDEDDDDDDATPPPVIAPRPEHTK SSNALNVKAVSETPAV APRPEHTKSVYTRSVI K A V T K S 4 1 0 7 0 0 4 0 1 1 0 1 0 0 8 2 3 0 0 4 0 0 36 1 3807.7599 H0YCM0;E9PM17;B3KNX7;Q13153 H0YCM0 54 89 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 3;4 0.00035738 56.332 By MS/MS By MS/MS 2 2 117630000 51600000 66030000 617 536 703 1658;1659;1660;1661 1670;1671;1672;1673 1671 1011 4 AVSLDSPVSVGSSPPVK SIRPPYNRAVSLDSPV VGSSPPVKNISAFPML R A V V K N 1 0 0 1 0 0 0 1 0 0 1 1 0 0 3 5 0 0 0 4 0 0 17 0 1624.8672 Q9Y6Q9 Q9Y6Q9 855 871 NCOA3 Nuclear receptor coactivator 3 yes yes 2 8.5956E-53 189.59 By MS/MS By MS/MS 1 1 31105000 17139000 13967000 618 3151 704 1662;1663 1674;1675;1676 1676 6741 3 AVSTVVVTTAPSPK GTASGSSKAVSTVVVT VTTAPSPKQAPEQQ__ K A V P K Q 2 0 0 0 0 0 0 0 0 0 0 1 0 0 2 2 3 0 0 4 0 0 14 0 1355.766 Q6P4R8 Q6P4R8 1280 1293 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 2;3 6.0918E-05 123.76 By MS/MS By MS/MS 2 2 18004000 9901200 8103200 619 2322 705 1664;1665;1666;1667 1677;1678;1679;1680 1677 4681 4 AVSVPASFFR PRGRRSRRAVSVPASF SVPASFFRRLAPSPAR R A V F R R 2 1 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 0 2 0 0 10 0 1079.5764 O14654 O14654 425 434 IRS4 Insulin receptor substrate 4 yes yes 2 0.00026035 123.62 By MS/MS By MS/MS 2 1 88214000 48803000 39411000 620 1453 706 1668;1669;1670 1681;1682;1683;1684;1685;1686;1687;1688;1689;1690;1691 1688 2681 11 AVTALAARTWLGVWGVRTMQAR ________________ GVRTMQARGFGSDQSE M A V A R G 5 3 0 0 0 1 0 2 0 0 2 0 1 0 0 0 3 2 0 3 0 0 22 2 2413.3165 A0A0B4J230;Q9UII2 A0A0B4J230 2 23 ATPIF1 ATPase inhibitor, mitochondrial yes no 3 0.019241 51.819 By MS/MS By matching 1 1 11436000 4443300 6992400 621 290 707 1671;1672 1692 1692 114 0 AVTAVTATAASDR ________________ TATAASDRMESDSDSD M A V D R M 5 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 2 0 0 13 0 1232.6361 K7EQ06;K7EJP7 K7EQ06 2 14 HDGFRP2 yes no 2;3 1.2638E-06 127.57 By MS/MS By MS/MS 2 2 95121000 53044000 42077000 622 1373 708 1673;1674;1675;1676 1693;1694;1695 1695 2541 3 AVTDFVIPECQKKSPISK NLSAGTIKAVTDFVIP QKKSPISKSMGTLENT K A V S K S 1 0 0 1 1 1 1 0 0 2 0 3 0 1 2 2 1 0 0 2 0 0 18 2 2046.082 Q6P0N0 Q6P0N0 677 694 MIS18BP1 Mis18-binding protein 1 yes yes 3 0.0030948 77.668 By MS/MS By MS/MS 1 1 20121000 11379000 8741700 623 2312 709 1677;1678 1696;1697 1696 4663 2 AVTELNEPLSNEDR DDMASAMKAVTELNEP EPLSNEDRNLLSVAYK K A V D R N 1 1 2 1 0 0 3 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1585.7584 Q04917 Q04917 29 42 YWHAH 14-3-3 protein eta yes yes 2 9.2485E-12 144.1 By MS/MS By MS/MS 1 1 21568000 11755000 9813400 624 2001 710 1679;1680 1698;1699 1698 2 AVTEQGAELSNEER DDMATCMKAVTEQGAE AELSNEERNLLSVAYK K A V E R N 2 1 1 0 0 1 4 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 14 0 1531.7114 P27348;E9PG15 P27348 28 41 YWHAQ 14-3-3 protein theta yes no 2 0.002982 91.313 By MS/MS By MS/MS 1 1 22346000 10444000 11902000 625 1768 711 1681;1682 1700;1701 1700 2 AVTIANSPSKPSEK AKMEHGPKAVTIANSP SPSKPSEKDSVVSLES K A V E K D 2 0 1 0 0 0 1 0 0 1 0 2 0 0 2 3 1 0 0 1 0 0 14 1 1427.762 Q8NEF9 Q8NEF9 197 210 SRFBP1 Serum response factor-binding protein 1 yes yes 2;3 0.0002709 120.86 By MS/MS By MS/MS 2 2 91989000 45826000 46164000 626 2514 712 1683;1684;1685;1686 1702;1703;1704 1702 5133 3 AVTIANSPSKPSEKDSVVSLESQK AKMEHGPKAVTIANSP VVSLESQKTPADPKLK K A V Q K T 2 0 1 1 0 1 2 0 0 1 1 3 0 0 2 6 1 0 0 3 0 0 24 2 2500.3021 Q8NEF9 Q8NEF9 197 220 SRFBP1 Serum response factor-binding protein 1 yes yes 3 9.0749E-05 81.48 By MS/MS By MS/MS 1 1 55983000 38115000 17868000 627 2514 713 1687;1688 1705;1706;1707 1707 5133 3 AVTPENHESMTSIFPSAAVGLK NSEQAEMRAVTPENHE PSAAVGLKNNNDILPN R A V L K N 3 0 1 0 0 0 2 1 1 1 1 1 1 1 2 3 2 0 0 2 0 0 22 0 2285.1362 Q86UW6;H0YA93 Q86UW6 1208 1229 N4BP2 NEDD4-binding protein 2 yes no 3 0.001986 59.975 By MS/MS 1 7705600 7705600 0 628 2405 714 1689 1708;1709 1709 975 7697 2 AVTPPVKDDNEDVFSAR QEDGPWTKAVTPPVKD NEDVFSARIQKMLGSC K A V A R I 2 1 1 3 0 0 1 0 0 0 0 1 0 1 2 1 1 0 0 3 0 0 17 1 1858.9061 Q5VT06 Q5VT06 876 892 CEP350 Centrosome-associated protein 350 yes yes 3 0.029298 50.858 By MS/MS 1 10652000 10652000 0 629 2263 715 1690 1710 1710 1 AVTPVPTKTEEVSNLK ESAPGSPRAVTPVPTK TEEVSNLKTLPKGLSA R A V L K T 1 0 1 0 0 0 2 0 0 0 1 2 0 0 2 1 3 0 0 3 0 0 16 1 1711.9356 Q6PKG0;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 524 539 LARP1 La-related protein 1 yes no 3 0.0011029 83.948 By MS/MS By matching 1 1 140480000 58865000 81618000 630 2330 716 1691;1692 1711 1711 7667 1 AVTSGLPGDTALLLPPSPRPSPR QPRVPSAKAVTSGLPG PSPRPSPRVHLPTQPA K A V P R V 2 2 0 1 0 0 0 2 0 0 4 0 0 0 6 3 2 0 0 1 0 0 23 1 2298.2696 Q6W2J9;H7BYY2 Q6W2J9 320 342 BCOR BCL-6 corepressor yes no 3 1.5344E-05 116.27 By MS/MS By MS/MS 1 1 24752000 11066000 13687000 631 2343 717 1693;1694 1712;1713 1713 4739 2 AVTTVTQSTPVPGPSVPPPEELQVSPGPR TVSSTLTRAVTTVTQS LQVSPGPRQQLPPRQL R A V P R Q 1 1 0 0 0 2 2 2 0 0 1 0 0 0 8 3 4 0 0 5 0 0 29 0 2923.5291 P51610;H7C1C4 P51610 1483 1511 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 3;4 0.00029473 61.903 By MS/MS By MS/MS 2 2 265930000 160000000 105930000 632 1877 718 1695;1696;1697;1698 1714;1715;1716;1717;1718 1716 3637 5 AVVIVDDR SQFGPIERAVVIVDDR AVVIVDDRGRSTGKGI R A V D R G 1 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 8 0 885.49198 P23246;C9IZL7;Q15233;H7C367 P23246 400 407 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein no no 2 0.0047232 116.88 By MS/MS By matching 1 1 68511000 40080000 28432000 633 1753;2131 719 1699;1700 1719 1719 1 AVVQSPQVTEVL EAEAFLKKAVVQSPQV SPQVTEVL________ K A V V L - 1 0 0 0 0 2 1 0 0 0 1 0 0 0 1 1 1 0 0 4 0 0 12 0 1268.6976 Q3KQU3 Q3KQU3 830 841 MAP7D1 MAP7 domain-containing protein 1 yes yes 2 2.2731E-06 126.66 By MS/MS By MS/MS 1 1 8768800 3762600 5006200 634 2187 720 1701;1702 1720;1721 1720 4347 2 AVVSGFDFDSPTSSK LRSTSYRRAVVSGFDF FDSPTSSKKKNRMSQP R A V S K K 1 0 0 2 0 0 0 1 0 0 0 1 0 2 1 4 1 0 0 2 0 0 15 0 1542.7202 Q96DR7 Q96DR7 320 334 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 3.4869E-13 144.4 By MS/MS By MS/MS 1 2 12013000 5264900 6747800 635 2637 721 1703;1704;1705 1722;1723 1723 5431 2 AVVSPPKFVFGSESVK STSETTPKAVVSPPKF VFGSESVKSIFSSEKS K A V V K S 1 0 0 0 0 0 1 1 0 0 0 2 0 2 2 3 0 0 0 4 0 0 16 1 1676.9138 P49792;J3KNE0;A6NKT7;Q7Z3J3;F8VYC4;P0DJD0;P0DJD1 P49792 2507 2522 RANBP2;RGPD3;RGPD4;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 yes no 2;3 0.00094887 95.662 By MS/MS By MS/MS 2 2 101590000 56307000 45284000 636 1860 722 1706;1707;1708;1709 1724;1725;1726;1727 1726 3599 4 AVVVSPK SSPRQVKRAVVVSPKE RAVVVSPKEENKAAEP R A V P K E 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 7 0 698.43268 G3V5E1;O75909 G3V5E1 336 342 CCNK Cyclin-K yes no 2 0.032298 70.056 By MS/MS By MS/MS 1 1 28429000 16767000 11662000 637 1085 723 1710;1711 1728;1729 1728 2045 2 AVVVSPKEENK SSPRQVKRAVVVSPKE VSPKEENKAAEPPPPK R A V N K A 1 0 1 0 0 0 2 0 0 0 0 2 0 0 1 1 0 0 0 3 0 0 11 1 1198.6558 G3V5E1;O75909 G3V5E1 336 346 CCNK Cyclin-K yes no 2 0.0039391 95.273 By MS/MS By matching 1 1 91599000 54736000 36863000 638 1085 724 1712;1713 1730 1730 2045 1 AVYIGVHVPFSK KEELESHRAVYIGVHV GVHVPFSKESRRRHRH R A V S K E 1 0 0 0 0 0 0 1 1 1 0 1 0 1 1 1 0 0 1 3 0 0 12 0 1315.7289 C9JRP1;Q9Y6M7;A0A0A0MST8;E9PFN4 C9JRP1 42 53 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 no no 2 0.00076744 112.36 By MS/MS 1 15959000 15959000 0 639 690;867 725 1714 1731 1731 8095 1 AWLDEDSNLSPSPLR GVPLEQYRAWLDEDSN NLSPSPLRDLSGGLGG R A W L R D 1 1 1 2 0 0 1 0 0 0 3 0 0 0 2 3 0 1 0 0 0 0 15 0 1698.8213 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 121 135 INO80B;INO80B-WBP1 INO80 complex subunit B yes no 2 7.7737E-16 149.31 By MS/MS By MS/MS 2 2 42291000 23419000 18872000 640 2787 726 1715;1716;1717;1718 1732;1733;1734 1732 5794;5795;5796 3 AWSSQDEVSTNVR CSPERLKKAWSSQDEV DEVSTNVRQGRRQSEP K A W V R Q 1 1 1 1 0 1 1 0 0 0 0 0 0 0 0 3 1 1 0 2 0 0 13 0 1477.6797 A1L390;A0A0U1RR71 A1L390 430 442 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.00089825 112.08 By MS/MS By MS/MS 1 1 13496000 6770400 6725200 641 445 727 1719;1720 1735;1736 1735 828 2 AYDPDYER DYERAYHRAYDPDYER AYDPDYERAYSPEYRR R A Y E R A 1 1 0 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 8 0 1027.4247 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 315 322 TJP2 Tight junction protein ZO-2 yes no 2 0.019845 86.794 By MS/MS By MS/MS 1 1 10494000 6311400 4182200 642 415 728 1721;1722 1737;1738 1737 8047 1 AYEDLEFQQLER EQLDVAQRAYEDLEFQ LEFQQLERESRQEEED R A Y E R E 1 1 0 1 0 2 3 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 12 0 1539.7205 M0R353;Q6NSJ2 M0R353 38 49 PHLDB3 Pleckstrin homology-like domain family B member 3 yes no 2 7.2362E-10 143.5 By MS/MS By MS/MS 1 1 11394000 5398800 5995500 643 1425 729 1723;1724 1739;1740 1740 8173 2 AYELAWATACSFGGSRPFVVAVDDIMFQK FGGFLMRKAYELAWAT VDDIMFQKPVEVGSLL K A Y Q K P 5 1 0 2 1 1 1 2 0 1 1 1 1 3 1 2 1 1 1 3 0 0 29 1 3235.5471 Q9Y305 Q9Y305 319 347 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial yes yes 3 0.028188 48.097 By MS/MS 1 0 0 0 644 3101 730 1725 1741 1741 1236 1 AYLQSITPQGYSDSEER PTELLMNRAYLQSITP GYSDSEERESMPRDGE R A Y E R E 1 1 0 1 0 2 2 1 0 1 1 0 0 0 1 3 1 0 2 0 0 0 17 0 1942.8909 A0A1B0GWI0;A0A1B0GVV8;A0JP08;A0A1B0GV02;O60315 A0A1B0GWI0 852 868 ZEB2 Zinc finger E-box-binding homeobox 2 yes no 2 0.0038279 77.13 By MS/MS By MS/MS 1 1 12695000 5212500 7482500 645 425 731 1726;1727 1742;1743 1743 795;796 2 AYQDQISPVPGAPK TELIERLRAYQDQISP SPVPGAPKAPAATSIL R A Y P K A 2 0 0 1 0 2 0 1 0 1 0 1 0 0 3 1 0 0 1 1 0 0 14 0 1469.7514 W0Z7M9;E7ER32;A0A087X287;Q969V6;B0QY83;A0A087WU73 W0Z7M9 414 427 mkl1;MKL1 MKL/myocardin-like protein 1 yes no 2 6.6864E-26 163.62 By MS/MS By MS/MS 1 1 70509000 35038000 35470000 646 3229 732 1728;1729 1744;1745 1745 6826 2 AYQHGGVTGLSQY DSTYQGERAYQHGGVT GVTGLSQY________ R A Y Q Y - 1 0 0 0 0 2 0 3 1 0 1 0 0 0 0 1 1 0 2 1 0 0 13 0 1379.647 Q92900 Q92900 1117 1129 UPF1 Regulator of nonsense transcripts 1 yes yes 2 2.9477E-11 145.52 By MS/MS By MS/MS 2 2 53933000 31694000 22239000 647 2607 733 1730;1731;1732;1733 1746;1747;1748;1749;1750 1750 5358;8413 5 AYQPQISSTNYNTLTLNVK SADRDCIRAYQPQISS NTLTLNVKTQEPDNLL R A Y V K T 1 0 3 0 0 2 0 0 0 1 2 1 0 0 1 2 3 0 2 1 0 0 19 0 2154.0957 P25391 P25391 2129 2147 LAMA1 Laminin subunit alpha-1 yes yes 2 0.029344 49.448 By MS/MS 1 0 0 0 648 1761 734 1734 1751 1751 1 AYSSFGGGR DFDTYDDRAYSSFGGG YSSFGGGRGSRGSAGG R A Y G R G 1 1 0 0 0 0 0 3 0 0 0 0 0 1 0 2 0 0 1 0 0 0 9 0 900.40898 Q15056 Q15056 11 19 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 0.0052003 79.713 By MS/MS By MS/MS 1 1 39199000 21626000 17573000 649 2125 735 1735;1736 1752;1753 1753 8344 1 AYSSPSTTPEAR ________________ PSTTPEARRREPQAPR K A Y A R R 2 1 0 0 0 0 1 0 0 0 0 0 0 0 2 3 2 0 1 0 0 0 12 0 1265.5888 G3V2R1;Q9UPU9 G3V2R1 8 19 SAMD4A Protein Smaug homolog 1 yes no 2 0.027682 43.77 By MS/MS 1 0 0 0 650 1070 736 1737 1754 1754 2027;2028 1 AYTHQVVTR KSFGSPNRAYTHQVVT YTHQVVTRWYRAPELL R A Y T R W 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 1 2 0 0 9 0 1073.5618 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 75 83 CDK7 Cyclin-dependent kinase 7 yes no 2;3 0.0070726 81.676 By MS/MS By MS/MS 2 2 233200000 134610000 98592000 651 727 737 1738;1739;1740;1741 1755;1756;1757 1755 7049 3 AYTPVVVTQWYR REYGSPLKAYTPVVVT VVVTQWYRAPELLLGA K A Y Y R A 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 2 1 2 3 0 0 12 0 1481.7667 Q5QPR4;Q5QPR3;Q9UQ88 Q5QPR4 544 555 CDK11A Cyclin-dependent kinase 11A yes no 2 0.027414 72.705 By MS/MS 1 13722000 0 13722000 652 2230 738 1742 1758 1758 1 AYWNASDLR PILIRAKRAYWNASDL YWNASDLRYKETFQKT R A Y L R Y 2 1 1 1 0 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 0 0 9 0 1094.5145 H0Y786;A0A087X1N7;P20929;H7C2D0 H0Y786 1688 1696 NEB Nebulin yes no 2 0.021494 64.64 By MS/MS By MS/MS 1 2 25458000 10075000 15383000 653 168 739 1743;1744;1745 1759;1760 1759 272 2 CALSSPSLAFTPPIK SVMESSDRCALSSPSL LAFTPPIKTLGTPTQP R C A I K T 2 0 0 0 1 0 0 0 0 1 2 1 0 1 3 3 1 0 0 0 0 0 15 0 1587.8331 Q8NFH5 Q8NFH5 255 269 NUP35 Nucleoporin NUP53 yes yes 2 4.6634E-16 151.07 By MS/MS By MS/MS 2 2 79316000 45257000 34060000 654 2518 740 1746;1747;1748;1749 1761;1762;1763;1764;1765 1764 5142;7739 5 CAPSAGSPAAAVGR GTERGPGRCAPSAGSP SPAAAVGRESPGAAAT R C A G R E 5 1 0 0 1 0 0 2 0 0 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1270.6088 Q7L2J0 Q7L2J0 54 67 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 0.018044 66.387 By MS/MS By MS/MS 1 1 45222000 22805000 22416000 655 2364 741 1750;1751 1766;1767;1768 1766 4789 3 CAPSAGSPAAAVGRESPGAAATSSSGPQAQQHR GTERGPGRCAPSAGSP GPQAQQHRGGGPQAQS R C A H R G 9 2 0 0 1 3 1 4 1 0 0 0 0 0 4 6 1 0 0 1 0 0 33 1 3118.4599 Q7L2J0 Q7L2J0 54 86 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 3 0.0040207 50.413 By matching By MS/MS 1 1 12404000 4750200 7653900 656 2364 742 1752;1753 1769 1769 4789;4790 1 CASESSISSSNSPLCDSSFNAPK RKATPRRRCASESSIS DSSFNAPKCGRGKPAL R C A P K C 2 0 2 1 2 0 1 0 0 1 1 1 0 1 2 9 0 0 0 0 0 0 23 0 2431.0268 O95696 O95696 850 872 BRD1 Bromodomain-containing protein 1 yes yes 2 0.017219 55.575 By matching By MS/MS 1 1 13187000 7525500 5661500 657 1606 743 1754;1755 1770 1770 3043 1 CCCPEALYAAGK RCPCCPDKCCCPEALY EALYAAGKAATSGVPS K C C G K A 3 0 0 0 3 0 1 1 0 0 1 1 0 0 1 0 0 0 1 0 0 0 12 0 1398.573 S4R3V8;Q86X29 S4R3V8 254 265 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 9.8328E-05 123.86 By MS/MS By MS/MS 1 1 40759000 18262000 22497000 658 2416 744 1756;1757 1771;1772 1771 8383 2 CDGDASPPSPAR SPPRHQSRCDGDASPP ASPPSPARWSLGRKRR R C D A R W 2 1 0 2 1 0 0 1 0 0 0 0 0 0 3 2 0 0 0 0 0 0 12 0 1228.5142 E7EUV9;F8W8D3;Q14493 E7EUV9 15 26 SLBP Histone RNA hairpin-binding protein yes no 2 7.1297E-05 121.92 By MS/MS By MS/MS 1 1 11785000 5791100 5994300 659 827 745 1758;1759 1773;1774 1773 1529;1530 2 CDILVQEELLASPK IDAIDDQKCDILVQEE EELLASPKKLLEDTLF K C D P K K 1 0 0 1 1 1 2 0 0 1 3 1 0 0 1 1 0 0 0 1 0 0 14 0 1613.8335 Q96JM3 Q96JM3 592 605 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 5.4168E-11 140.49 By MS/MS By MS/MS 3 3 38485000 21510000 16975000 660 2674 746 1760;1761;1762;1763;1764;1765 1775;1776;1777;1778;1779;1780;1781 1775 5509 7 CDSSPDSAEDVR QFSVLFTKCDSSPDSA PDSAEDVRKLCPDCPL K C D V R K 1 1 0 3 1 0 1 0 0 0 0 0 0 0 1 3 0 0 0 1 0 0 12 0 1336.5201 CON__P12763;P02765 CON__P12763 132 143 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 2 0.010655 86.944 By matching By MS/MS 1 1 13328000 6098100 7229800 + 661 713 747 1766;1767 1782 1782 1318 0 CELLYEGPPDDEAAMGIK PVTAQKYRCELLYEGP DEAAMGIKSCDPKGPL R C E I K S 2 0 0 2 1 0 3 2 0 1 2 1 1 0 2 0 0 0 1 0 0 0 18 0 2006.8965 P13639 P13639 369 386 EEF2 Elongation factor 2 yes yes 2 0.0039287 87.001 By MS/MS By matching 1 1 17658000 11755000 5902300 662 1693 748 1768;1769 1783 1783 629 1 CETSASELER FNRDDRGRCETSASEL TSASELERMNPGPGGK R C E E R M 1 1 0 0 1 0 3 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 10 0 1180.503 H3BTQ3;P41440 H3BTQ3 220 229 SLC19A1 Folate transporter 1 yes no 2 0.0031705 92.943 By MS/MS By MS/MS 1 1 22609000 12746000 9862800 663 1254 749 1770;1771 1784;1785 1784 2334 2 CGGVEQASSSPR KEEQGDLKCGGVEQAS EQASSSPRSDPLGSTQ K C G P R S 1 1 0 0 1 1 1 2 0 0 0 0 0 0 1 3 0 0 0 1 0 0 12 0 1233.5408 Q5VZL5;H7C1I7 Q5VZL5 1232 1243 ZMYM4 Zinc finger MYM-type protein 4 yes no 2 0.0092016 74.987 By MS/MS By matching 1 1 19522000 11097000 8424900 664 2283 750 1772;1773 1786 1786 4592;4593 1 CGHTCLSPIK C G I K 0 0 0 0 2 0 0 1 1 1 1 1 0 0 1 1 1 0 0 0 0 0 10 0 1171.5478 REV__P35555 yes yes 2 0.0029129 101.97 By MS/MS By MS/MS 2 2 57751000 31764000 25987000 + 665 3207 751 1774;1775;1776;1777 1787;1788 1788 6805 2 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK PPVVLRLKCGSGPVHI DEEEEDVKLLSISGKR K C G V K L 2 0 0 3 1 1 8 3 2 1 1 1 0 0 1 3 0 0 0 4 0 0 31 0 3379.4634 P06748;E5RI98 P06748 104 134 NPM1 Nucleophosmin yes no 3;4 4.6123E-27 151.24 By MS/MS By MS/MS 29 28 6258600000 3166900000 3091700000 666 1647 752;753 1778;1779;1780;1781;1782;1783;1784;1785;1786;1787;1788;1789;1790;1791;1792;1793;1794;1795;1796;1797;1798;1799;1800;1801;1802;1803;1804;1805;1806;1807;1808;1809;1810;1811;1812;1813;1814;1815;1816;1817;1818;1819;1820;1821;1822;1823;1824;1825;1826;1827;1828;1829;1830;1831;1832;1833;1834 1789;1790;1791;1792;1793;1794;1795;1796;1797;1798;1799;1800;1801;1802;1803;1804;1805;1806;1807;1808;1809;1810;1811;1812;1813;1814;1815;1816;1817;1818;1819;1820;1821;1822;1823;1824;1825;1826;1827;1828;1829;1830;1831;1832;1833;1834;1835;1836;1837;1838;1839;1840;1841;1842;1843;1844;1845;1846;1847;1848;1849;1850;1851;1852;1853;1854;1855;1856;1857;1858;1859;1860;1861;1862;1863;1864;1865;1866 1800 3107 74 CGSSEDLHDSVR RDSEEGPRCGSSEDLH EDLHDSVREGPDLDRP R C G V R E 0 1 0 2 1 0 1 1 1 0 1 0 0 0 0 3 0 0 0 1 0 0 12 0 1360.5677 Q7Z4V5 Q7Z4V5 631 642 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 2 0.019498 66.004 By matching By MS/MS 1 1 14066000 8388800 5677600 667 2388 754 1835;1836 1867 1867 4855 1 CHSLGYNFIHK LIPHGHRKCHSLGYNF LGYNFIHKMNTAEFKS K C H H K M 0 0 1 0 1 0 0 1 2 1 1 1 0 1 0 1 0 0 1 0 0 0 11 0 1374.6503 Q86X27 Q86X27 341 351 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes yes 3 0.0039974 82.417 By MS/MS 1 0 0 0 668 2415 755 1837 1868 1868 4925 1 CIACQAAKLSPR QNKVTDNKCIACQAAK QAAKLSPRDTAKQTGI K C I P R D 3 1 0 0 2 1 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 12 1 1373.6908 P49790 P49790 678 689 NUP153 Nuclear pore complex protein Nup153 yes yes 3 0.0067038 65.511 By MS/MS By MS/MS 1 1 75294000 40128000 35165000 669 1859 756 1838;1839 1869;1870 1869 3584 2 CIFMSETQSSPTK EDPPAKRKCIFMSETQ ETQSSPTKGVLMYQPS K C I T K G 0 0 0 0 1 1 1 0 0 1 0 1 1 1 1 3 2 0 0 0 0 0 13 0 1514.6745 B4DGW0;A0A087WUY7;O75928 B4DGW0 200 212 PIAS2 E3 SUMO-protein ligase PIAS2 yes no 2 1.3593E-08 135.04 By MS/MS By MS/MS 2 2 40585000 21080000 19505000 670 66 757;758 1840;1841;1842;1843 1871;1872;1873 1872 23 116;117 3 CIPALDSLTPANEDQK GGGCALLRCIPALDSL TPANEDQKIGIEIIKR R C I Q K I 2 0 1 2 1 1 1 0 0 1 2 1 0 0 2 1 1 0 0 0 0 0 16 0 1770.8458 P10809 P10809 447 462 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0052217 83.137 By MS/MS By MS/MS 1 1 16218000 7972400 8245200 671 1677 759 1844;1845 1874;1875 1875 2 CLIEVNETITQISWEKIHGK WGKNVSLKCLIEVNET SWEKIHGKSSQTVAVH K C L G K S 0 0 1 0 1 1 3 1 1 4 1 2 0 0 0 1 2 1 0 1 0 0 20 1 2397.2362 Q9NQS3;C9J795;C9JMW3;H7C4L0 Q9NQS3 78 97 PVRL3 Nectin-3 yes no 2 0.028659 62.088 By MS/MS 1 0 0 0 672 2897 760 1846 1876 1876 1 CLLADLPLPPELPGGDDLSKSPEEK KEVEKKLRCLLADLPL LSKSPEEKKTATQLHS R C L E K K 1 0 0 3 1 0 3 2 0 0 6 2 0 0 5 2 0 0 0 0 0 0 25 1 2689.352 Q14004;Q9BVE2;A0A087X209 Q14004 644 668 CDK13 Cyclin-dependent kinase 13 yes no 3 3.8705E-11 104.55 By matching By MS/MS 1 1 20810000 12636000 8174300 673 2080 761 1847;1848 1877 1877 4098 0 CLPGVLASPELR LPSYLQDRCLPGVLAS VLASPELRSYPYAFSV R C L L R S 1 1 0 0 1 0 1 1 0 0 3 0 0 0 2 1 0 0 0 1 0 0 12 0 1310.7017 Q5H9F3;A0A075B6Q3 Q5H9F3 489 500 BCORL1 BCL-6 corepressor-like protein 1 yes no 2 0.002501 86.756 By MS/MS By MS/MS 1 1 26294000 14457000 11837000 674 2215 762 1849;1850 1878;1879 1879 4429 2 CLSDPGPHPEPGEGEPFFPK PSSQRIQRCLSDPGPH EGEPFFPKGQ______ R C L P K G 0 0 0 1 1 0 3 3 1 0 1 1 0 2 6 1 0 0 0 0 0 0 20 0 2192.9837 P19634 P19634 794 813 SLC9A1 Sodium/hydrogen exchanger 1 yes yes 3 0.00080755 72.058 By MS/MS 1 9779400 9779400 0 675 1733 763 1851 1880 1880 3264 1 CLVAGLLSPR LIPDGYNRCLVAGLLS VAGLLSPRFVDVQPSS R C L P R F 1 1 0 0 1 0 0 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 10 0 1084.6063 Q8WYP5 Q8WYP5 521 530 AHCTF1 Protein ELYS yes yes 2 3.6313E-11 168.98 By MS/MS By MS/MS 1 1 24320000 13578000 10742000 676 2575 764 1852;1853 1881;1882;1883;1884 1882 5275 4 CNLACTPPR FVALSDLRCNLACTPP NLACTPPRHLHVVRPM R C N P R H 1 1 1 0 2 0 0 0 0 0 1 0 0 0 2 0 1 0 0 0 0 0 9 0 1087.4903 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;F6S6P2;X6REW1;A0A0G2JJM1 A0A0G2JL47 339 347 BAT3;BAG6 Large proline-rich protein BAG6 yes no 2 0.023626 78.548 By MS/MS By matching 1 1 7647900 4790100 2857900 677 6 765 1854;1855 1885 1885 1 CNLRCQYCMPEEGVPLTPK LRISLTEKCNLRCQYC EGVPLTPKANLLTTEE K C N P K A 0 1 1 0 3 1 2 1 0 0 2 1 1 0 3 0 1 0 1 1 0 0 19 1 2351.0531 Q9NZB8 Q9NZB8 80 98 MOCS1 Molybdenum cofactor biosynthesis protein 1;Cyclic pyranopterin monophosphate synthase;Cyclic pyranopterin monophosphate synthase accessory protein yes yes 2 0.029926 51.013 By MS/MS 1 0 0 0 678 2956 766 1856 1886 1886 1175 1 CPSLDNLAVPESPGVGGGK PDPFLKPRCPSLDNLA SPGVGGGKASEPLLSP R C P G K A 1 0 1 1 1 0 1 4 0 0 2 1 0 0 3 2 0 0 0 2 0 0 19 0 1852.8989 O14686 O14686 2249 2267 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2;3 0.0032501 70.987 By MS/MS By MS/MS 1 1 10655000 2926400 7728300 679 1454 767 1857;1858 1887;1888;1889 1888 2694 3 CPSQSSSRPAAMISQPPTPPTGQPVR GGGEGRKRCPSQSSSR PPTGQPVREDAKWTSQ R C P V R E 2 2 0 0 1 3 0 1 0 1 0 0 1 0 7 5 2 0 0 1 0 0 26 1 2733.3327 Q6PKG0 Q6PKG0 1054 1079 LARP1 La-related protein 1 yes yes 3 0.00018309 76.106 By MS/MS By MS/MS 1 1 36485000 16527000 19958000 680 2330 768 1859;1860 1890;1891;1892 1890 935 4693 3 CQENGQELSPIALEPGPEPHR QELVPGLRCQENGQEL EPGPEPHRAKQEARNQ R C Q H R A 1 1 1 0 1 2 4 2 1 1 2 0 0 0 4 1 0 0 0 0 0 0 21 0 2357.107 H0YB23;A0A0A0MR08;E7EST9;B5MEG5 H0YB23 14 34 USP19 Ubiquitin carboxyl-terminal hydrolase yes no 3 0.00045402 75.404 By MS/MS By MS/MS 1 1 18831000 10052000 8779000 681 197 769 1861;1862 1893;1894;1895 1893 350 3 CQSVSSAGELETENYER TNNPEPEKCQSVSSAG LETENYERDSLLATVP K C Q E R D 1 1 1 0 1 1 4 1 0 0 1 0 0 0 0 3 1 0 1 1 0 0 17 0 1957.8323 Q96RS0 Q96RS0 573 589 TGS1 Trimethylguanosine synthase yes yes 2 0.00017294 118.24 By MS/MS By MS/MS 1 1 9365700 3410000 5955800 682 2704 770 1863;1864 1896;1897 1897 5577;5578 2 CRSPGMLEPLGSSR MSPTPLDRCRSPGMLE LEPLGSSRTPMSVLQQ R C R S R T 0 2 0 0 1 0 1 2 0 0 2 0 1 0 2 3 0 0 0 0 0 0 14 1 1545.7392 Q9UQ35 Q9UQ35 2130 2143 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.00045057 100.69 By MS/MS By MS/MS 4 4 393890000 189140000 204750000 683 3074 771;772 1865;1866;1867;1868;1869;1870;1871;1872 1898;1899;1900;1901;1902;1903 1899 1221 6508 6 CSATPSAQVKPIVSASPPSR VIEMSSSRCSATPSAQ VSASPPSRAVAGSRSS R C S S R A 3 1 0 0 1 1 0 0 0 1 0 1 0 0 4 5 1 0 0 2 0 0 20 1 2039.047 Q96EV2;H0Y3K4 Q96EV2 726 745 RBM33 RNA-binding protein 33 yes no 3 5.9682E-05 105.06 By MS/MS By MS/MS 1 1 27802000 15586000 12216000 684 2644 773 1873;1874 1904;1905;1906;1907 1905 5453;5454;5455 4 CSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAK ICAGGQDRCSDAAGYP ISPLDLAKLNQVARQQ R C S A K L 5 0 0 4 1 2 1 3 3 2 4 1 0 0 4 3 2 0 2 0 0 0 37 0 3944.8639 Q15365 Q15365 201 237 PCBP1 Poly(rC)-binding protein 1 yes yes 4 0.00048778 52.69 By MS/MS By MS/MS 1 1 59075000 22462000 36613000 685 2133 774 1875;1876 1908;1909 1909 4219;7595 2 CSDNSSYEEPLSPISASSSTSR HSQEDSSRCSDNSSYE SASSSTSRRRQGQRDL R C S S R R 1 1 1 1 1 0 2 0 0 1 1 0 0 0 2 9 1 0 1 0 0 0 22 0 2360.0074 B3KPJ4;A0A0A0MSI2;Q8IXK0 B3KPJ4 346 367 PHC2 Polyhomeotic-like protein 2 yes no 2;3 4.3693E-07 126.07 By MS/MS By MS/MS 3 3 107010000 55291000 51715000 686 248 775 1877;1878;1879;1880;1881;1882 1910;1911;1912;1913;1914;1915 1913 430 6 CSGPGLSPGMVR VTDASKVKCSGPGLSP GLSPGMVRANLPQSFQ K C S V R A 0 1 0 0 1 0 0 3 0 0 1 0 1 0 2 2 0 0 0 1 0 0 12 0 1216.5693 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 1453 1464 FLNA Filamin-A yes no 2 0.0013382 81.904 By MS/MS By MS/MS 2 2 201480000 95634000 105850000 687 1742 776 1883;1884;1885;1886 1916;1917;1918 1916 653 3281 3 CSSCEPFPDGATNNLSR LEHLKGLKCSSCEPFP GATNNLSRSNSDESNF K C S S R S 1 1 2 1 2 0 1 1 0 0 1 0 0 1 2 3 1 0 0 0 0 0 17 0 1910.7887 O95999 O95999 119 135 BCL10 B-cell lymphoma/leukemia 10 yes yes 2 0.016543 63.46 By matching By MS/MS 1 1 11077000 5610300 5466800 688 1614 777 1887;1888 1919 1919 3059 1 CSSPVDTECSHAEGSR CCSESGPRCSSPVDTE CSHAEGSRSQGPEKAF R C S S R S 1 1 0 1 2 0 2 1 1 0 0 0 0 0 1 4 1 0 0 1 0 0 16 0 1777.6996 T1ECW5;O75170;A0A0A0MSJ8 T1ECW5 495 510 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 2 0.020837 62.528 By MS/MS By matching 1 1 6879400 2799000 4080400 689 1540 778 1889;1890 1920 1920 2909 1 CTLPEHESPSQDISDACEAESTER PKSEDADRCTLPEHES CEAESTERCEMSEHPS R C T E R C 2 1 0 2 2 1 5 0 1 1 1 0 0 0 2 4 2 0 0 0 0 0 24 0 2747.1287 Q32MZ4 Q32MZ4 726 749 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 3 1.7111E-06 95.153 By MS/MS By MS/MS 1 1 57968000 29917000 28051000 690 2185 779 1891;1892 1921;1922;1923;1924 1921 4342;4343 4 CTNINSDSPVGK LSQCHSSKCTNINSDS NSDSPVGKKLTIHSEK K C T G K K 0 0 2 1 1 0 0 1 0 1 0 1 0 0 1 2 1 0 0 1 0 0 12 0 1290.5874 H3BLY2;B5LMG6;A0A087WV86;Q6PGQ7 H3BLY2 108 119 BORA;C13orf34 Protein aurora borealis yes no 1 0.028244 40.724 By MS/MS 1 3263300 0 3263300 691 72 780 1893 1925 1925 131 0 CTSLEESLSMTQWEQSISACPTR GWDVVMKKCTSLEESL SISACPTRNLTVDGHF K C T T R N 1 1 0 0 2 2 3 0 0 1 2 0 1 0 1 5 3 1 0 0 0 0 23 0 2700.183 Q13591 Q13591 513 535 SEMA5A Semaphorin-5A yes yes 3 0.031111 44.164 By MS/MS 1 0 0 0 692 2068 781 1894 1926 1926 1 CVACQNPDKPSPSTSVPAPASFK RNEANATRCVACQNPD VPAPASFKFGTSETSK R C V F K F 3 0 1 1 2 1 0 0 0 0 0 2 0 1 5 4 1 0 0 2 0 0 23 1 2444.1464 P49792 P49792 1563 1585 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 3 0.0097129 65.184 By MS/MS By matching 1 1 25841000 11249000 14592000 693 1860 782 1895;1896 1927 1927 3600;7472 0 CVDLYNQAQSK QAGDDLMRCVDLYNQA LYNQAQSKWFEEMVTT R C V S K W 1 0 1 1 1 2 0 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 11 0 1324.6082 O60861 O60861 386 396 GAS7 Growth arrest-specific protein 7 yes yes 2 0.013516 64.374 By matching By MS/MS 1 1 10733000 4985500 5747400 694 1531 783 1897;1898 1928 1928 2895 1 CVSVQTDPTDEIPTKK KEGSRKSRCVSVQTDP TDEIPTKKSKKHKKHK R C V K K S 0 0 0 2 1 1 1 0 0 1 0 2 0 0 2 1 3 0 0 2 0 0 16 1 1816.8877 P18583 P18583 92 107 SON Protein SON yes yes 2 0.00046938 102.72 By MS/MS 1 13750000 13750000 0 695 1725 784 1899 1929 1929 3238 1 CVWSPLASPSTSILK SPSGMQTRCVWSPLAS SPSTSILKRGLKRSQE R C V L K R 1 0 0 0 1 0 0 0 0 1 2 1 0 0 2 4 1 1 0 1 0 0 15 0 1644.8545 Q5UIP0;H7C2B5 Q5UIP0 2169 2183 RIF1 Telomere-associated protein RIF1 yes no 2 0.020344 64.136 By matching By MS/MS 1 1 8289000 5779200 2509800 696 2261 785 1900;1901 1930 1930 4521;4522 1 CVWSPLASPSTSILKR SPSGMQTRCVWSPLAS PSTSILKRGLKRSQED R C V K R G 1 1 0 0 1 0 0 0 0 1 2 1 0 0 2 4 1 1 0 1 0 0 16 1 1800.9556 Q5UIP0;H7C2B5 Q5UIP0 2169 2184 RIF1 Telomere-associated protein RIF1 yes no 3 0.0001073 108.66 By MS/MS By MS/MS 1 1 10307000 6143100 4164200 697 2261 786 1902;1903 1931;1932;1933 1932 4521;4522 3 CYGGSFAQR EANLVPPKCYGGSFAQ YGGSFAQRNLCNDDGG K C Y Q R N 1 1 0 0 1 1 0 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 9 0 1044.4447 P42684 P42684 717 725 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.012592 73.665 By matching By MS/MS 1 1 9746500 5436500 4309900 698 1828 787 1904;1905 1934 1934 8264 0 DADEEGEGDEETPTSAPGSSLAGR EEEGEEDRDADEEGEG PGSSLAGRNPYALLGE R D A G R N 3 1 0 3 0 0 5 4 0 0 1 0 0 0 2 3 2 0 0 0 0 0 24 0 2375.9837 A0A140T8Y2;P36915 A0A140T8Y2 373 396 GNL1 Guanine nucleotide-binding protein-like 1 yes no 2 0.0017195 70.121 By MS/MS By matching 1 1 7279400 4592600 2686800 699 403 788 1906;1907 1935 1935 744 1 DADLSPVNASIIK MSREDVTKDADLSPVN PVNASIIKENYEKDED K D A I K E 2 0 1 2 0 0 0 0 0 2 1 1 0 0 1 2 0 0 0 1 0 0 13 0 1341.714 F5H1U9;O75970 F5H1U9 479 491 MPDZ Multiple PDZ domain protein yes no 2 0.0022465 87.363 By MS/MS By MS/MS 1 1 24661000 16906000 7754900 700 962 789 1908;1909 1936;1937 1937 1811 2 DAEAHPWLSDYDDLTSATYDK ELEEMAKRDAEAHPWL LTSATYDKGYQFEEEN R D A D K G 3 0 0 5 0 0 1 0 1 0 2 1 0 0 1 2 2 1 2 0 0 0 21 0 2412.0394 J3KPV0;B4E0T2;P50542 J3KPV0 272 292 PEX5 Peroxisomal targeting signal 1 receptor yes no 2;3 0.017541 57.798 By matching By MS/MS 2 2 36842000 20977000 15865000 701 571 790 1910;1911;1912;1913 1938;1939 1938 1051 1 DAEDAMDAMDGAVLDGR FVRFHDKRDAEDAMDA DGAVLDGRELRVQMAR R D A G R E 4 1 0 5 0 0 1 2 0 0 1 0 2 0 0 0 0 0 0 1 0 0 17 0 1750.7138 Q01130;J3QL05;J3KP15 Q01130 67 83 SRSF2 Serine/arginine-rich splicing factor 2 yes no 2 2.7361E-15 148.68 By MS/MS By MS/MS 2 1 17428000 10733000 6695700 702 1978 791;792 1914;1915;1916 1940;1941;1942 1941 783;784 3 DAEPQPGSPAAESLEEPDAAAGLSSTK ERGPPEDRDAEPQPGS AAGLSSTKKAPPPRDP R D A T K K 6 0 0 2 0 1 4 2 0 0 2 1 0 0 4 4 1 0 0 0 0 0 27 0 2624.2089 C9JPC9;Q9H9J4 C9JPC9 593 619 USP42 Ubiquitin carboxyl-terminal hydrolase 42 yes no 3 2.1415E-07 90.974 By MS/MS By MS/MS 1 1 52418000 26371000 26046000 703 683 793 1917;1918 1943;1944;1945 1943 1259 3 DAEYIYPSLESDDDDPALK DSLGACFKDAEYIYPS DDDDPALKSRPKKKKN K D A L K S 2 0 0 5 0 0 2 0 0 1 2 1 0 0 2 2 0 0 2 0 0 0 19 0 2154.9481 Q9UPP1;H0Y3N9;H0Y589 Q9UPP1 847 865 PHF8 Histone lysine demethylase PHF8 yes no 2;3 8.5902E-05 115.53 By MS/MS By MS/MS 1 3 163040000 16660000 146380000 704 3066 794;795 1919;1920;1921;1922 1946;1947;1948;1949 1948 6478 4 DAGDPSPPNK ________________ GDPSPPNKMLRRSDSP R D A N K M 1 0 1 2 0 0 0 1 0 0 0 1 0 0 3 1 0 0 0 0 0 0 10 0 996.45124 A0A0A0MRT2;Q9BTA9;E9PMZ7;C9JMU2;C9JVK6;C9JD58;J3QTA0 A0A0A0MRT2 3 12 WAC WW domain-containing adapter protein with coiled-coil yes no 2 0.019557 82.505 By MS/MS By MS/MS 1 2 9029600 3323300 5706300 705 229 796 1923;1924;1925 1950;1951 1951 406 1 DAGGPRPESPVPAGR ________________ ESPVPAGRASLEEPPD R D A G R A 2 2 0 1 0 0 1 3 0 0 0 0 0 0 4 1 0 0 0 1 0 0 15 1 1461.7324 E9PS47;E9PLE4;Q9BVG9 E9PS47 8 22 PTDSS2 Phosphatidylserine synthase 2 yes no 3 0.0015787 78.225 By MS/MS By MS/MS 1 1 50854000 25605000 25250000 706 902 797 1926;1927 1952;1953 1953 1680 2 DAGTIAGLNVLR DSQRQATKDAGTIAGL IAGLNVLRIINEPTAA K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1198.667 P11142;E9PKE3;E9PN89;E9PLF4;E9PI65;E9PQQ4;E9PQK7;E9PK54 P11142 160 171 HSPA8 Heat shock cognate 71 kDa protein no no 2 1.4686E-25 174.86 By MS/MS By MS/MS 1 1 46487000 21585000 24902000 707 1680;894 798 1928;1929 1954;1955 1955 2 DAGTIAGLNVMR DAQRQATKDAGTIAGL IAGLNVMRIINEPTAA K D A M R I 2 1 1 1 0 0 0 2 0 1 1 0 1 0 0 0 1 0 0 1 0 0 12 0 1216.6234 P11021 P11021 186 197 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0070198 85.676 By matching By MS/MS 1 1 8093800 3600600 4493100 708 1679 799 1930;1931 1956 1956 622 1 DAGVIAGLNVLR DSQRQATKDAGVIAGL IAGLNVLRIINEPTAA K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 0 0 0 2 0 0 12 0 1196.6877 A0A0G2JIW1;P0DMV9;P0DMV8 A0A0G2JIW1 161 172 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 0.00081994 113.71 By MS/MS By MS/MS 1 1 18799000 8973200 9825800 709 351 800 1932;1933 1957;1958 1958 2 DAGVTESGLNVTLTIRLLMHGK ________________ IRLLMHGKEVGSIIGK M D A G K E 1 1 1 1 0 0 1 3 1 1 4 1 1 0 0 1 3 0 0 2 0 0 22 1 2324.2522 Q15365 Q15365 2 23 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.031834 40.88 By MS/MS 1 0 0 0 710 2133 801 1934 1959 1959 851 1 DAHKSEVAHR YSRGVFRRDAHKSEVA HKSEVAHRFKDLGEEN R D A H R F 2 1 0 1 0 0 1 0 2 0 0 1 0 0 0 1 0 0 0 1 0 0 10 1 1148.5687 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;A0A087WWT3;H7C013 B7WNR0 25 34 ALB Serum albumin yes no 3 0.014159 75.509 By MS/MS By matching 1 1 2467500 1842600 624870 + 711 314 802 1935;1936 1960 1960 1 DALGDSLQVPVSPSSTTSSR GHSPSQPRDALGDSLQ PSSTTSSRCSSRDGEF R D A S R C 1 1 0 2 0 1 0 1 0 0 2 0 0 0 2 6 2 0 0 2 0 0 20 0 2002.9807 Q9Y2D5;C9JVY5 Q9Y2D5 141 160 AKAP2 A-kinase anchor protein 2 yes no 2;3 4.3694E-71 193.47 By MS/MS By MS/MS 2 3 114680000 66899000 47779000 712 3087 803 1937;1938;1939;1940;1941 1961;1962;1963;1964;1965 1964 6627 5 DANSSFFDNSSSPHLLDQLK STLQIGKRDANSSFFD PHLLDQLKAQNQELRN R D A L K A 1 0 2 3 0 1 0 0 1 0 3 1 0 2 1 5 0 0 0 0 0 0 20 0 2221.0287 P49454 P49454 265 284 CENPF Centromere protein F yes yes 3 3.2801E-05 119.51 By MS/MS By MS/MS 1 1 12176000 6443700 5732300 713 1854 804 1942;1943 1966;1967 1967 3563 2 DAPISPASIASSSSTPSSK DKTRLLKKDAPISPAS SSSTPSSKSKELSLNE K D A S K S 3 0 0 1 0 0 0 0 0 2 0 1 0 0 3 8 1 0 0 0 0 0 19 0 1788.8741 Q04727;H0Y5S0;H7C4E4 Q04727 288 306 TLE4 Transducin-like enhancer protein 4 yes no 2 0.001269 86.573 By MS/MS By MS/MS 1 1 43020000 21878000 21143000 714 1999 805 1944;1945 1968;1969;1970 1970 3850;3851;3852;3853;3854;3855 3 DAPTSPASVASSSSTPSSK DKARSLKKDAPTSPAS SSSTPSSKTKDLGHND K D A S K T 3 0 0 1 0 0 0 0 0 0 0 1 0 0 3 8 2 0 0 1 0 0 19 0 1762.8221 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 282 300 TLE3 Transducin-like enhancer protein 3 yes no 2;3 2.3046E-07 134.4 By MS/MS By MS/MS 2 2 195520000 103650000 91866000 715 986 806 1946;1947;1948;1949 1971;1972;1973;1974;1975;1976 1972 1848 6 DAPTSPASVASSSSTPSSKTK DKARSLKKDAPTSPAS STPSSKTKDLGHNDKS K D A T K D 3 0 0 1 0 0 0 0 0 0 0 2 0 0 3 8 3 0 0 1 0 0 21 1 1991.9647 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 282 302 TLE3 Transducin-like enhancer protein 3 yes no 2 0.030849 49.326 By MS/MS 1 0 0 0 716 986 807 1950 1977 1977 1848 1 DAQRLSPIPEEVPK SKKTFLDKDAQRLSPI PIPEEVPKSTLESEKP K D A P K S 1 1 0 1 0 1 2 0 0 1 1 1 0 0 3 1 0 0 0 1 0 0 14 1 1577.8413 Q96T23;H0YER1;H0YCN2 Q96T23 599 612 RSF1 Remodeling and spacing factor 1 yes no 2 0.011878 77.726 By MS/MS By matching 1 1 21673000 11176000 10497000 717 2714 808 1951;1952 1978 1978 5615 1 DASDDLDDLNFFNQK DEEDTRKKDASDDLDD DLNFFNQKKKKKKTKK K D A Q K K 1 0 2 5 0 1 0 0 0 0 2 1 0 2 0 1 0 0 0 0 0 0 15 0 1755.7588 P20042 P20042 65 79 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 0.0008815 107.11 By MS/MS By matching 1 1 7053900 4408300 2645600 718 1735 809 1953;1954 1979 1979 3270 1 DASDGEDEKPPLPPR EPDPPDDRDASDGEDE EKPPLPPRSGSTSISA R D A P R S 1 1 0 3 0 0 2 1 0 0 1 1 0 0 4 1 0 0 0 0 0 0 15 1 1621.7584 O15357 O15357 130 144 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 2;3 0.012585 67.102 By MS/MS By MS/MS 2 3 34632000 16821000 17811000 719 1479 810 1955;1956;1957;1958;1959 1980;1981;1982 1980 2765 2 DASPINRWSPTR LSRRERSKDASPINRW INRWSPTRRRSRSPIR K D A T R R 1 2 1 1 0 0 0 0 0 1 0 0 0 0 2 2 1 1 0 0 0 0 12 1 1398.7004 Q13523;H0YDJ3 Q13523 429 440 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 2 0.012312 95.195 By MS/MS By MS/MS 1 1 182150000 92523000 89622000 720 2061 811 1960;1961 1983;1984 1984 4064;4065 2 DASSQDCYDIPR VDLNKLRKDASSQDCY QDCYDIPRAFPSDRSS K D A P R A 1 1 0 3 1 1 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 12 0 1425.5831 B7Z3B9;Q13480 B7Z3B9 296 307 GAB1 GRB2-associated-binding protein 1 yes no 2 0.0009053 110.54 By MS/MS By MS/MS 1 1 26218000 15131000 11087000 721 588 812 1962;1963 1985;1986 1986 8081 2 DASSSPASTASSASSTSLK DKNRLLKKDASSSPAS SASSTSLKSKEMSLHE K D A L K S 4 0 0 1 0 0 0 0 0 0 1 1 0 0 1 9 2 0 0 0 0 0 19 0 1740.8014 Q04724 Q04724 282 300 TLE1 Transducin-like enhancer protein 1 yes yes 2 0.00025181 117.07 By MS/MS By MS/MS 1 1 55797000 31803000 23994000 722 1998 813 1964;1965 1987;1988;1989 1989 3849 3 DASVFQDESNMSVLDIPSATPEK NTSLSMSRDASVFQDE IPSATPEKQVTQEGED R D A E K Q 2 0 1 3 0 1 2 0 0 1 1 1 1 1 2 4 1 0 0 2 0 0 23 0 2479.1424 H7BY98;H7C2K9;P21675 H7BY98 318 340 TAF1 Transcription initiation factor TFIID subunit 1 yes no 3 0.02475 54.457 By MS/MS 1 0 0 0 723 1261 814 1966 1990 1990 455 2342 1 DATNVGDEGGFAPNILENK VIKEKYGKDATNVGDE APNILENKEGLELLKT K D A N K E 2 0 3 2 0 0 2 3 0 1 1 1 0 1 1 0 1 0 0 1 0 0 19 0 1959.9174 P06733 P06733 203 221 ENO1 Alpha-enolase yes yes 2;3 0 299.56 By MS/MS By MS/MS 2 2 205870000 76412000 129460000 724 1646 815 1967;1968;1969;1970 1991;1992;1993;1994 1993 4 DAVTYTEHAK VFLENVIRDAVTYTEH VTYTEHAKRKTVTAMD R D A A K R 2 0 0 1 0 0 1 0 1 0 0 1 0 0 0 0 2 0 1 1 0 0 10 0 1133.5353 P62805 P62805 69 78 HIST1H4A Histone H4 yes yes 2;3 0.015902 99.013 By MS/MS By MS/MS 2 3 57942000 33992000 23951000 725 1945 816 1971;1972;1973;1974;1975 1995;1996;1997 1996 2 DCCVEPGTELSPTLPHQL PAAGCCCRDCCVEPGT SPTLPHQL________ R D C Q L - 0 0 0 1 2 1 2 1 1 0 3 0 0 0 3 1 2 0 0 1 0 0 18 0 2051.9292 Q14012 Q14012 353 370 CAMK1 Calcium/calmodulin-dependent protein kinase type 1 yes yes 2 0.0019713 82.707 By MS/MS By MS/MS 1 1 24055000 9666300 14389000 726 2082 817 1976;1977 1998;1999 1998 4108 2 DCGKAFTQNSDLTK GIKPYKCKDCGKAFTQ TQNSDLTKHARTHSGE K D C T K H 1 0 1 2 1 1 0 1 0 0 1 2 0 1 0 1 2 0 0 0 0 0 14 1 1583.725 Q14584 Q14584 356 369 ZNF266 Zinc finger protein 266 yes yes 3 0.012829 59.898 By MS/MS 1 3243100 0 3243100 727 2093 818 1978 2000 2000 7575 1 DCRSPGLLDTTPIR MNEAADSRDCRSPGLL LLDTTPIRGSCTTQRK R D C I R G 0 2 0 2 1 0 0 1 0 1 2 0 0 0 2 1 2 0 0 0 0 0 14 1 1599.8039 Q8IY92 Q8IY92 1466 1479 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2;3 0.0037661 71.344 By MS/MS By MS/MS 1 2 26707000 7558800 19149000 728 2440 819 1979;1980;1981 2001;2002;2003 2001 4991 3 DCSYGAVTSPTSTLESR ISTNATAKDCSYGAVT PTSTLESRDSGIIATL K D C S R D 1 1 0 1 1 0 1 1 0 0 1 0 0 0 1 4 3 0 1 1 0 0 17 0 1829.8102 Q9HCD6;J3KRP9 Q9HCD6 161 177 TANC2 Protein TANC2 yes no 2 1.0218E-15 149.19 By MS/MS By MS/MS 1 1 15504000 8552900 6950700 729 2873 820 1982;1983 2004;2005;2006 2005 6049 3 DDAMLLK VGEVIVTKDDAMLLKG KDDAMLLKGKGDKAQI K D D L K G 1 0 0 2 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 7 0 804.40514 P10809 P10809 353 359 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.014734 68.485 By MS/MS 1 0 0 0 730 1677 821 1984 2007 2007 620 1 DDANNDPQWSEEQLIAAK PKVELFFKDDANNDPQ EEQLIAAKFCFAGLLI K D D A K F 3 0 2 3 0 2 2 0 0 1 1 1 0 0 1 1 0 1 0 0 0 0 18 0 2042.9181 E9PBS1;P22234;D6RF62 E9PBS1 132 149 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 0.0043995 93.494 By matching By MS/MS 1 1 8883100 3357200 5525900 731 845 822 1985;1986 2008 2008 1 DDATPVRDEPMDAESITFK SLFVLPSRDDATPVRD DAESITFKSVSEKDKR R D D F K S 2 1 0 4 0 0 2 0 0 1 0 1 1 1 2 1 2 0 0 1 0 0 19 1 2135.9681 Q7Z6E9;H3BSK8 Q7Z6E9 981 999 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 3 0.020072 52.909 By MS/MS By matching 2 2 30789000 17586000 13202000 732 2393 823;824 1987;1988;1989;1990 2009;2010 2009 967 1 DDDDIDLFGSDDEEESEEAK GSGATDSKDDDDIDLF EEESEEAKRLREERLA K D D A K R 1 0 0 7 0 0 5 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 20 0 2271.8663 P24534;C9JZW3 P24534 97 116 EEF1B2 Elongation factor 1-beta yes no 2 6.639E-152 219.95 By MS/MS By MS/MS 2 2 0 0 0 733 1758 825 1991;1992;1993;1994 2011;2012;2013;2014 2013 3314 4 DDDDIDLFGSDDEEESEEAKR GSGATDSKDDDDIDLF EESEEAKRLREERLAQ K D D K R L 1 1 0 7 0 0 5 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 21 1 2427.9674 P24534;C9JZW3 P24534 97 117 EEF1B2 Elongation factor 1-beta yes no 3 0.00055087 101.23 By MS/MS By MS/MS 2 1 0 0 0 734 1758 826 1995;1996;1997 2015;2016;2017 2015 3314 3 DDEYDYLFK ________________ DEYDYLFKVVLIGDSG R D D F K V 0 0 0 3 0 0 1 0 0 0 1 1 0 1 0 0 0 0 2 0 0 0 9 0 1206.5081 B4DQU5;H3BSC1;P62491;H3BMH2;Q15907 B4DQU5 5 13 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B yes no 2 0.0007318 119.41 By MS/MS By MS/MS 1 1 4950300 2693800 2256500 735 558 827 1998;1999 2018;2019 2019 8073 2 DDGLFSGDPNWFPK LGGLAVARDDGLFSGD GDPNWFPKKSKENPRN R D D P K K 0 0 1 3 0 0 0 2 0 0 1 1 0 2 2 1 0 1 0 0 0 0 14 0 1593.71 P37802;X6RJP6 P37802 140 153 TAGLN2 Transgelin-2 yes no 2 3.9084E-07 133.42 By matching By MS/MS 1 1 15562000 6848600 8713300 736 1805 828 2000;2001 2020;2021 2021 2 DDHYQYDRSGPYGYRGIGGMK PEDRFGYRDDHYQYDR YRGIGGMKPSMSDTNL R D D M K P 0 2 0 3 0 1 0 5 1 1 0 1 1 0 1 1 0 0 4 0 0 0 21 2 2434.076 Q9Y6V0 Q9Y6V0 2902 2922 PCLO Protein piccolo yes yes 3 0.030973 45.257 By MS/MS 1 0 0 0 737 3154 829 2002 2022 2022 1 DDISEIQSLASDHSGR HSANASERDDISEIQS LASDHSGRSHDRPPRR R D D G R S 1 1 0 3 0 1 1 1 1 2 1 0 0 0 0 4 0 0 0 0 0 0 16 0 1728.7915 A0A087X0K9;G5E9E7;G3V1L9;Q07157;H0YKB1 A0A087X0K9 275 290 TJP1 Tight junction protein ZO-1 yes no 3 0.030561 51.876 By MS/MS 1 0 0 0 738 156 830 2003 2023 2023 1 DDPDGKQEAKPQQAAGMLSPK VSSTLAAKDDPDGKQE AAGMLSPKTGGKEAAS K D D P K T 3 0 0 3 0 3 1 2 0 0 1 3 1 0 3 1 0 0 0 0 0 0 21 2 2210.0637 J3KQ96;E7ETY2;Q13428 J3KQ96 1201 1221 TCOF1 Treacle protein no no 3 0.023512 56.304 By matching By MS/MS 1 1 12569000 7034700 5534200 739 822;2059 831 2004;2005 2024 2024 1498 1 DDSIEGIYDTLK ________________ EGIYDTLKQCALISKS K D D L K Q 0 0 0 3 0 0 1 1 0 2 1 1 0 0 0 1 1 0 1 0 0 0 12 0 1367.6456 E9PP77;H0YCY7;E9PL69;P23921 E9PP77 3 14 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 2 0.0047489 99.283 By MS/MS 1 0 0 0 740 900 832 2006 2025 2025 8129 1 DDVSTLGSMLPAKASPVAESPK KADSEEERDDVSTLGS SPVAESPKVMDEKSSL R D D P K V 3 0 0 2 0 0 1 1 0 0 2 2 1 0 3 4 1 0 0 2 0 0 22 1 2199.1093 J3KQH6;P78364;H0YGZ1;H0YGK7 J3KQH6 605 626 PHC1 Polyhomeotic-like protein 1 yes no 2 0.028171 52.101 By MS/MS 1 0 0 0 741 1329 833 2007 2026 2026 470 2463;2464;2465 1 DEDMLYSPELAQR LDLPPRRRDEDMLYSP YSPELAQRGHDDDVSS R D E Q R G 1 1 0 2 0 1 2 0 0 0 2 0 1 0 1 1 0 0 1 0 0 0 13 0 1565.7032 Q9Y2W2 Q9Y2W2 231 243 WBP11 WW domain-binding protein 11 yes yes 2 5.44E-20 166.38 By MS/MS By MS/MS 2 2 58584000 27889000 30695000 742 3097 834;835 2008;2009;2010;2011 2027;2028;2029;2030 2027 1235 6655 4 DEDVDVLPSTVEDSPFSR SSQSKDPRDEDVDVLP VEDSPFSRAFSRRRPI R D E S R A 0 1 0 4 0 0 2 0 0 0 1 0 0 1 2 3 1 0 0 3 0 0 18 0 2005.9116 Q7Z2Z1;H0YN97 Q7Z2Z1 1868 1885 TICRR Treslin yes no 2 0.0011815 90.872 By matching By MS/MS 1 1 8953500 3681400 5272100 743 2373 836 2012;2013 2031 2031 4807;4808 1 DEEEWENTEAVMKNK LELMKLIRDEEEWENT TEAVMKNKEKPSGRGR R D E N K E 1 0 2 1 0 0 5 0 0 0 0 2 1 0 0 0 1 1 0 1 0 0 15 1 1850.7993 Q96PV4 Q96PV4 327 341 PNMA5 Paraneoplastic antigen-like protein 5 yes yes 2 0.016096 63.426 By MS/MS 1 0 0 0 744 2697 837 2014 2032 2032 1072 1 DEEGESGAEEGPDLEEPGAGYK EEDCIQVKDEEGESGA EEPGAGYKKLFSDAQP K D E Y K K 2 0 0 2 0 0 7 5 0 0 1 1 0 0 2 1 0 0 1 0 0 0 22 0 2263.9241 Q9UQL6 Q9UQL6 606 627 HDAC5 Histone deacetylase 5 yes yes 2 0.0010729 77.357 By matching By MS/MS 1 1 18710000 11317000 7392800 745 3079 838 2015;2016 2033 2033 6616 1 DEEQSEADAGSGPPTPGPTTLGPK GVEYLLARDEEQSEAD GPTTLGPKKEITDIAA R D E P K K 2 0 0 2 0 1 3 4 0 0 1 1 0 0 5 2 3 0 0 0 0 0 24 0 2337.0608 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2;A0A087X0E3 A0A0A0MS59 361 384 SRCAP Helicase SRCAP yes no 2;3 5.5157E-05 87.99 By MS/MS By MS/MS 1 2 49833000 18618000 31215000 746 239 839 2017;2018;2019 2034;2035;2036 2036 6900 3 DEFEGLFK EHTLQWARDEFEGLFK DEFEGLFKQPAENVNQ R D E F K Q 0 0 0 1 0 0 2 1 0 0 1 1 0 2 0 0 0 0 0 0 0 0 8 0 983.46001 P22314;Q5JRR6 P22314 650 657 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 5.0324E-20 157.21 By MS/MS By MS/MS 1 1 4111100 0 4111100 747 1747 840 2020;2021 2037;2038 2037 2 DEIGGMTDGMQLFDR AESFGLKRDEIGGMTD DGMQLFDRISTAGYSI R D E D R I 0 1 0 3 0 1 1 3 0 1 1 0 2 1 0 0 1 0 0 0 0 0 15 0 1683.7233 Q9UNE0 Q9UNE0 386 400 EDAR Tumor necrosis factor receptor superfamily member EDAR yes yes 2 0.028123 40.715 By matching By MS/MS 1 1 18449000 9501900 8946700 748 3060 841 2022;2023 2039 2039 1213;1214 1 DEILPTTPISEQK HVSIVEPKDEILPTTP TTPISEQKGGKPEPPA K D E Q K G 0 0 0 1 0 1 2 0 0 2 1 1 0 0 2 1 2 0 0 0 0 0 13 0 1469.7613 E9PL09;P23396;H0YEU2;E9PSF4;E9PPU1 E9PL09 203 215 RPS3 40S ribosomal protein S3 yes no 2 5.2726E-19 164.22 By MS/MS By MS/MS 2 2 985490000 510150000 475340000 749 899 842;843 2024;2025;2026;2027 2040;2041;2042;2043 2042 7119;7120 4 DEKENLATLFGDMEDLTDEEEVPASQSTENR DGETGETRDEKENLAT ASQSTENRVLPAPAPR R D E N R V 2 1 2 4 0 1 7 1 0 0 3 1 1 1 1 2 3 0 0 1 0 0 31 1 3511.542 Q5T670;Q7L590 Q5T670 69 99 MCM10 Protein MCM10 homolog yes no 3 6.2469E-07 79.209 By MS/MS By MS/MS 1 1 52998000 24288000 28711000 750 2244 844 2028;2029 2044;2045 2045 897 7647 2 DELHIVEAEAMNYEGSPIK VSLGAGAKDELHIVEA NYEGSPIKVTLATLKM K D E I K V 2 0 1 1 0 0 4 1 1 2 1 1 1 0 1 1 0 0 1 1 0 0 19 0 2144.0096 P06748 P06748 55 73 NPM1 Nucleophosmin yes yes 2;3 2.9378E-33 168.08 By MS/MS By MS/MS 3 5 85210000 34036000 51174000 751 1647 845;846 2030;2031;2032;2033;2034;2035;2036;2037 2046;2047;2048;2049;2050;2051 2046 600 3108 6 DELHIVEAEAMNYEGSPIKVTLATLK VSLGAGAKDELHIVEA KVTLATLKMSVQPTVS K D E L K M 3 0 1 1 0 0 4 1 1 2 3 2 1 0 1 1 2 0 1 2 0 0 26 1 2870.4736 P06748 P06748 55 80 NPM1 Nucleophosmin yes yes 3;4 7.3983E-07 106.69 By MS/MS By MS/MS 2 2 98706000 53417000 45289000 752 1647 847 2038;2039;2040;2041 2052;2053 2053 600 3108 2 DENLKNAWPDPKNGGTNQPVTQK D E Q K 1 0 4 2 0 2 1 2 0 0 1 3 0 0 3 0 2 1 0 1 0 0 23 2 2550.2463 REV__P02787 yes yes 3 0.013823 45.941 By MS/MS By matching 1 1 11759000 3688900 8069800 + 753 3202 848 2042;2043 2054 2054 7964 1 DENSVELTMAEGPYK RRLSVSGRDENSVELT TMAEGPYKIILTARPF R D E Y K I 1 0 1 1 0 0 3 1 0 0 1 1 1 0 1 1 1 0 1 1 0 0 15 0 1681.7505 E9PNH1;F5H6X6;E9PKU7;Q14697 E9PNH1 20 34 GANAB Neutral alpha-glucosidase AB yes no 2 0.016273 75.819 By MS/MS 1 2335400 0 2335400 754 898 849 2044 2055 2055 338 1 DERQSQRASR SWAEKQQRDERQSQRA RQSQRASRVREEMFAK R D E S R V 1 3 0 1 0 2 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 10 2 1231.6018 K7ELS4;K7EJA3;K7ERG7;Q96MH2 K7ELS4 117 126 HEXIM2 Protein HEXIM2 yes no 2 0.029083 40.475 By MS/MS By matching 1 1 9450600 4829100 4621500 755 1368 850 2045;2046 2056 2056 1 DETEFYLGK KIEGVYARDETEFYLG ETEFYLGKRCAYVYKA R D E G K R 0 0 0 1 0 0 2 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 9 0 1100.5026 P18077;F8WBS5;F8WB72;C9K025 P18077 37 45 RPL35A 60S ribosomal protein L35a yes no 2 0.0033779 113.41 By MS/MS 1 3791100 3791100 0 756 1722 851 2047 2057 2057 1 DETNYGIPQR ________________ TNYGIPQRALRGHSHF R D E Q R A 0 1 1 1 0 1 1 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 10 0 1191.552 D6RFX4;D6R9Z1;D6R9L0;P63244;D6RHH4;D6RAC2;D6REE5;D6RBD0;D6RAU2;E9PD14;D6RFZ9;D6RGK8;D6R909 D6RFX4 7 16 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 2.7181E-10 72.325 By MS/MS By MS/MS 1 1 22631000 10746000 11886000 757 728 852 2048;2049 2058;2059 2058 1 DFDHHDSPALEVFTEQPPSPLPK SLIEAMDKDFDHHDSP QPPSPLPKSKGKGKPL K D F P K S 1 0 0 3 0 1 2 0 2 0 2 1 0 2 5 2 1 0 0 1 0 0 23 0 2602.234 Q92545 Q92545 1357 1379 TMEM131 Transmembrane protein 131 yes yes 3 0.0072492 50.858 By MS/MS 1 10436000 10436000 0 758 2582 853 2050 2060 2060 5300 1 DFLLQQTMLR SDADPSTKDFLLQQTM LLQQTMLRVKDPKKSL K D F L R V 0 1 0 1 0 2 0 0 0 0 3 0 1 1 0 0 1 0 0 0 0 0 10 0 1263.6645 Q04760 Q04760 29 38 GLO1 Lactoylglutathione lyase yes yes 2 0.0013666 113.66 By MS/MS By MS/MS 1 1 6648500 3266200 3382300 759 2000 854 2051;2052 2061;2062 2061 2 DFNLPEYDLNVEER KFKAHDKKDFNLPEYD YDLNVEERLVLIEKSV K D F E R L 0 1 2 2 0 0 3 0 0 0 2 0 0 1 1 0 0 0 1 1 0 0 14 0 1751.8002 Q96RT1 Q96RT1 727 740 ERBB2IP Protein LAP2 yes yes 2 1.893E-10 136.53 By MS/MS By MS/MS 1 1 29962000 17137000 12826000 760 2705 855 2053;2054 2063;2064 2064 8434 2 DFPGAAGEISAYGPGLVSIAVVQDGDGRR VMDQSLMKDFPGAAGE VQDGDGRREVRSPTKA K D F R R E 4 2 0 3 0 1 1 6 0 2 1 0 0 1 2 2 0 0 1 3 0 0 29 1 2873.4308 O43491;E9PK52;E9PHY5;H0Y5B0;E9PII3 O43491 566 594 EPB41L2 Band 4.1-like protein 2 yes no 3 0.031803 51.301 By matching By MS/MS 1 1 4802300 1961400 2840800 761 1502 856 2055;2056 2065 2065 0 DFPLLNQSISPLSSSVLK LTDSIGNKDFPLLNQS PLSSSVLKFIEKGTSS K D F L K F 0 0 1 1 0 1 0 0 0 1 4 1 0 1 2 5 0 0 0 1 0 0 18 0 1944.0568 E7EVZ1;Q86UP3 E7EVZ1 499 516 ZFHX4 Zinc finger homeobox protein 4 yes no 2 2.194E-06 130.09 By MS/MS By MS/MS 1 1 26469000 21035000 5434200 762 831 857 2057;2058 2066;2067 2066 1549 2 DFQDYMEPEEGCQGSPQR ELERKFVKDFQDYMEP GCQGSPQRRGPLTSGS K D F Q R R 0 1 0 2 1 3 3 2 0 0 0 0 1 1 2 1 0 0 1 0 0 0 18 0 2171.8524 O43237;H3BUM4;B4E2E0 O43237 180 197 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 2 1.1587E-07 123.55 By MS/MS 2 0 0 0 763 1490 858;859 2059;2060 2068;2069 2068 536 2783 2 DFQDYMEPEEGCQGSPQRR ELERKFVKDFQDYMEP CQGSPQRRGPLTSGSD K D F R R G 0 2 0 2 1 3 3 2 0 0 0 0 1 1 2 1 0 0 1 0 0 0 19 1 2327.9535 O43237;H3BUM4;B4E2E0 O43237 180 198 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 3 7.5322E-05 96.666 By matching By MS/MS 2 2 170340000 70895000 99448000 764 1490 860;861 2061;2062;2063;2064 2070;2071 2071 536 2783 2 DFQEYVEPGEDFPASPQR NVLLLVIRDFQEYVEP DFPASPQRRNTASQED R D F Q R R 1 1 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 18 0 2109.928 E9PHI6;Q9Y6G9;C9JGM7 E9PHI6 77 94 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2;3 6.528E-16 150.68 By MS/MS By MS/MS 2 1 71600000 42658000 28942000 765 878 862 2065;2066;2067 2072;2073;2074;2075;2076;2077 2077 1624 6 DFQEYVEPGEDFPASPQRR NVLLLVIRDFQEYVEP FPASPQRRNTASQEDK R D F R R N 1 2 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 19 1 2266.0291 E9PHI6;Q9Y6G9;C9JGM7 E9PHI6 77 95 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2;3 0.00026399 118.52 By MS/MS By MS/MS 2 2 558330000 273360000 284970000 766 878 863 2068;2069;2070;2071 2078;2079;2080;2081;2082;2083 2083 1624 6 DFSLEQLR SLPRMKKRDFSLEQLR DFSLEQLRQYDGSRNP R D F L R Q 0 1 0 1 0 1 1 0 0 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 1006.5084 O15173 O15173 102 109 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 2 0.0075978 107.45 By MS/MS By MS/MS 1 1 9972400 5739700 4232600 767 1475 864 2072;2073 2084;2085 2084 2757 2 DFSPEALK LMEVCKEKDFSPEALK DFSPEALKKANITFEY K D F L K K 1 0 0 1 0 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 8 0 905.44945 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RJT0 A0A087WZK9 178 185 EIF3H Eukaryotic translation initiation factor 3 subunit H yes no 2 0.022308 93.178 By MS/MS 1 0 0 0 768 142 865 2074 2086 2086 230 1 DFSPEALKK LMEVCKEKDFSPEALK FSPEALKKANITFEYM K D F K K A 1 0 0 1 0 0 1 0 0 0 1 2 0 1 1 1 0 0 0 0 0 0 9 1 1033.5444 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RJT0 A0A087WZK9 178 186 EIF3H Eukaryotic translation initiation factor 3 subunit H yes no 2 0.015755 84.31 By MS/MS 1 0 0 0 769 142 866 2075 2087 2087 230 1 DFSPGLFEDPSVAFATPDPK LDKGGNAKDFSPGLFE AFATPDPKKTTGPLSF K D F P K K 2 0 0 3 0 0 1 1 0 0 1 1 0 3 4 2 1 0 0 1 0 0 20 0 2136.0052 Q7Z5J4;A8MXE8 Q7Z5J4 681 700 RAI1 Retinoic acid-induced protein 1 yes no 2 0.0026081 86.479 By MS/MS By MS/MS 1 1 14663000 8601800 6061400 770 2389 867 2076;2077 2088;2089 2088 4858 1 DFSPLQTQTFNR GEKCFSERDFSPLQTQ LQTQTFNRETTIKCYS R D F N R E 0 1 1 1 0 2 0 0 0 0 1 0 0 2 1 1 2 0 0 0 0 0 12 0 1452.6997 Q6P4F7 Q6P4F7 673 684 ARHGAP11A Rho GTPase-activating protein 11A yes yes 2 0.0093308 74.841 By MS/MS 1 2376400 0 2376400 771 2320 868 2078 2090 2090 4679 1 DFTNEAPPAPLPDASASPLSPHR KRAFPRKRDFTNEAPP ASPLSPHRRAKSLDRR R D F H R R 4 1 1 2 0 0 1 0 1 0 2 0 0 1 6 3 1 0 0 0 0 0 23 0 2386.1553 Q6WCQ1 Q6WCQ1 346 368 MPRIP Myosin phosphatase Rho-interacting protein yes yes 3 0.0035662 72.058 By MS/MS By MS/MS 1 1 13860000 6481400 7379000 772 2345 869 2079;2080 2091;2092;2093 2091 4747;4748;4749 2 DFTNEAPPAPLPDASASPLSPHRR KRAFPRKRDFTNEAPP SPLSPHRRAKSLDRRS R D F R R A 4 2 1 2 0 0 1 0 1 0 2 0 0 1 6 3 1 0 0 0 0 0 24 1 2542.2564 Q6WCQ1 Q6WCQ1 346 369 MPRIP Myosin phosphatase Rho-interacting protein yes yes 3 1.1171E-05 86.357 By MS/MS By MS/MS 1 1 28645000 16208000 12438000 773 2345 870 2081;2082 2094;2095 2095 4747;4748;4749 2 DFTPVCTTELGR GILFSHPRDFTPVCTT VCTTELGRAAKLAPEF R D F G R A 0 1 0 1 1 0 1 1 0 0 1 0 0 1 1 0 3 0 0 1 0 0 12 0 1394.65 P30041 P30041 42 53 PRDX6 Peroxiredoxin-6 yes yes 2 0.0031574 93.766 By MS/MS By matching 1 1 14081000 8348500 5732800 774 1777 871 2083;2084 2096 2096 7425 1 DFVNYLVR DAQSNAARDFVNYLVR DFVNYLVRINEIKSEE R D F V R I 0 1 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 2 0 0 8 0 1024.5342 Q08211 Q08211 64 71 DHX9 ATP-dependent RNA helicase A yes yes 2 0.017965 102.71 By MS/MS 1 2884700 0 2884700 775 2012 872 2085 2097 2097 1 DFYSEFGNK PSPEPVDKDFYSEFGN FYSEFGNKTTGKMENY K D F N K T 0 0 1 1 0 0 1 1 0 0 0 1 0 2 0 1 0 0 1 0 0 0 9 0 1105.4716 Q9Y2I1 Q9Y2I1 1291 1299 NISCH Nischarin yes yes 2 0.0031235 110.41 By MS/MS By MS/MS 1 1 3895800 0 3895800 776 3092 873 2086;2087 2098;2099 2098 8508 2 DGAVNGPSVVGDQTPIEPQTSIER QEAPVLPKDGAVNGPS EPQTSIERLTETKDGS K D G E R L 1 1 1 2 0 2 2 3 0 2 0 0 0 0 3 2 2 0 0 3 0 0 24 0 2465.2034 P49321 P49321 377 400 NASP Nuclear autoantigenic sperm protein yes yes 2;3 2.1784E-05 83.179 By MS/MS By MS/MS 2 3 63807000 28760000 35047000 777 1851 874 2088;2089;2090;2091;2092 2100;2101;2102;2103;2104 2101 3559;7463 5 DGDKSPMSSLQISNEK EEEAAAGKDGDKSPMS SLQISNEKNLEPGKQI K D G E K N 0 0 1 2 0 1 1 1 0 1 1 2 1 0 1 4 0 0 0 0 0 0 16 1 1734.8094 Q9UER7 Q9UER7 491 506 DAXX Death domain-associated protein 6 yes yes 2;3 0.00074023 96.435 By MS/MS By MS/MS 3 4 82090000 40478000 41612000 778 2997 875;876 2093;2094;2095;2096;2097;2098;2099 2105;2106;2107;2108;2109;2110;2111 2105 1189 6298 7 DGDSVMVLPTIPEEEAK VATPVDWKDGDSVMVL TIPEEEAKKLFPKGVF K D G A K K 1 0 0 2 0 0 3 1 0 1 1 1 1 0 2 1 1 0 0 2 0 0 17 0 1828.8764 P30041 P30041 183 199 PRDX6 Peroxiredoxin-6 yes yes 2 0.032356 65.809 By matching By MS/MS 1 2 24255000 5736400 18518000 779 1777 877 2100;2101;2102 2112 2112 673 1 DGDSYDPYDFSDTEEEMPQVHTPK KTRQPDAKDGDSYDPY MPQVHTPKTADSQETK K D G P K T 0 0 0 5 0 1 3 1 1 0 0 1 1 1 3 2 2 0 2 1 0 0 24 0 2801.1287 J3KQ69;P25205;Q7Z6P5 J3KQ69 711 734 MCM3 DNA replication licensing factor MCM3 yes no 3 8.0456E-10 117.03 By MS/MS 1 0 0 0 780 1328 878 2103 2113 2113 2462;8166 1 DGEEAGAYDGPR YPTLKIFRDGEEAGAY AGAYDGPRTAGVSSYF R D G P R T 2 1 0 2 0 0 2 3 0 0 0 0 0 0 1 0 0 0 1 0 0 0 12 0 1235.5055 H7BZJ3;P30101 H7BZJ3 84 95 PDIA3 Protein disulfide-isomerase A3 yes no 2 0.0060324 85.958 By matching By MS/MS 1 1 5733700 2535500 3198200 781 1267 879 2104;2105 2114 2114 1 DGEEYEWKETAR EMDELCYRDGEEYEWK YEWKETARWLKFEEDV R D G A R W 1 1 0 1 0 0 4 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 12 1 1511.6529 C9JRP1;Q9Y6M7;A0A0A0MST8;E9PFN4 C9JRP1 123 134 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 no no 2 0.00060301 92.112 By MS/MS By MS/MS 1 1 25667000 13184000 12483000 782 690;867 880 2106;2107 2115;2116 2115 8096 2 DGEQSPNVSLMQR RPESERERDGEQSPNV PNVSLMQRMSDMLSRW R D G Q R M 0 1 1 1 0 2 1 1 0 0 1 0 1 0 1 2 0 0 0 1 0 0 13 0 1459.6725 Q58WW2;F2Z305 Q58WW2 332 344 DCAF6 DDB1- and CUL4-associated factor 6 yes no 2 5.9761E-05 119.96 By MS/MS By MS/MS 2 2 68172000 32877000 35295000 783 2210 881;882 2108;2109;2110;2111 2117;2118;2119;2120 2118 884 4420 4 DGETLEELMK EALAALLRDGETLEEL ETLEELMKLSPEELLL R D G M K L 0 0 0 1 0 0 3 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 10 0 1163.538 A0A0A0MSQ0;P13797 A0A0A0MSQ0 235 244 PLS3 Plastin-3 yes no 2 4.5638E-06 130.75 By MS/MS By MS/MS 2 3 15397000 3320100 12077000 784 255 883;884 2112;2113;2114;2115;2116 2121;2122;2123;2124 2124 103 3 DGETLEGSDAEESLDK KAEGGPFKDGETLEGS DAEESLDKTAESSLLE K D G D K T 1 0 0 3 0 0 4 2 0 0 2 1 0 0 0 2 1 0 0 0 0 0 16 0 1693.7166 Q9P2D1 Q9P2D1 2949 2964 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 2 1.9974E-31 165.58 By matching By MS/MS 1 1 47795000 26209000 21586000 785 2978 885 2117;2118 2125 2125 6270 1 DGGNPFAEPSELDNPFQDPAVIQHRPSR ________________ VIQHRPSRQYATLDVY R D G S R Q 2 2 2 3 0 2 2 2 1 1 1 0 0 2 5 2 0 0 0 1 0 0 28 1 3089.4591 O14828 O14828 6 33 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 3 0.00036793 66.019 By MS/MS 1 8029600 0 8029600 786 1458 886 2119 2126 2126 2712 1 DGGSGNSTIIVSR LIDELLERDGGSGNST NSTIIVSRSGEDESQE R D G S R S 0 1 1 1 0 0 0 3 0 2 0 0 0 0 0 3 1 0 0 1 0 0 13 0 1261.6262 Q7Z6Z7 Q7Z6Z7 2359 2371 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.005349 75.998 By MS/MS By MS/MS 1 1 45235000 23019000 22216000 787 2394 887 2120;2121 2127;2128 2127 4882;4883 2 DGIDDESYGQIFKPIISK YAVNFPMRDGIDDESY IFKPIISKVMEMYQPS R D G S K V 0 0 0 3 0 1 1 2 0 4 0 2 0 1 1 2 0 0 1 0 0 0 18 1 2024.0102 Q92769 Q92769 231 248 HDAC2 Histone deacetylase 2 yes yes 3 0.0006162 106.35 By MS/MS 1 0 0 0 788 2600 888 2122 2129 2129 1 DGKNNVAFMSYFLQGK KLAEGAERDGKNNVAF MSYFLQGKVDACLELL R D G G K V 1 0 2 1 0 1 0 2 0 0 1 2 1 2 0 1 0 0 1 1 0 0 16 1 1817.8771 P35606 P35606 722 737 COPB2 Coatomer subunit beta yes yes 3 0.026266 47.506 By MS/MS By matching 1 1 12739000 6653000 6085500 789 1798 889 2123;2124 2130 2130 681 0 DGLAPEKTSPDR MAASDTERDGLAPEKT PEKTSPDRDKKKEQSE R D G D R D 1 1 0 2 0 0 1 1 0 0 1 1 0 0 2 1 1 0 0 0 0 0 12 1 1284.631 E9PI52;Q7L4I2 E9PI52 9 20 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 3 0.028478 58.079 By MS/MS 1 0 0 0 790 881 890 2125 2131 2131 7115 1 DGLAPEKTSPDRDK MAASDTERDGLAPEKT KTSPDRDKKKEQSEVS R D G D K K 1 1 0 3 0 0 1 1 0 0 1 2 0 0 2 1 1 0 0 0 0 0 14 2 1527.7529 E9PI52;Q7L4I2 E9PI52 9 22 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 3 0.0067833 77.051 By matching By MS/MS 1 1 84155000 35923000 48232000 791 881 891 2126;2127 2132 2132 7115 1 DGLNDDDFEPYLSPQAR QNGSVHQKDGLNDDDF PYLSPQARPNNAYTAM K D G A R P 1 1 1 4 0 1 1 1 0 0 2 0 0 1 2 1 0 0 1 0 0 0 17 0 1950.8595 S4R3J8;Q9Y5A9 S4R3J8 27 43 YTHDF2 YTH domain-containing family protein 2 yes no 2;3 4.4511E-77 205.92 By MS/MS By MS/MS 4 4 354770000 180710000 174060000 792 3126 892;893 2128;2129;2130;2131;2132;2133;2134;2135 2133;2134;2135;2136;2137;2138;2139 2138 6698 7 DGLNQTTIPVSPPSTTKPSR IEDSSVQKDGLNQTTI PSTTKPSRASTASPCN K D G S R A 0 1 1 1 0 1 0 1 0 1 1 1 0 0 4 3 4 0 0 1 0 0 20 1 2095.0909 Q71RC2;X6RLN4 Q71RC2 573 592 LARP4 La-related protein 4 yes no 2;3 4.1876E-05 119.76 By MS/MS By MS/MS 2 2 125650000 61690000 63958000 793 2359 894 2136;2137;2138;2139 2140;2141;2142;2143;2144 2141 4782 5 DGLYKIGSGYSGTVR FFLYLLCKDGLYKIGS SGYSGTVRGHIYNSTS K D G V R G 0 1 0 1 0 0 0 4 0 1 1 1 0 0 0 2 1 0 2 1 0 0 15 1 1571.7944 O75592 O75592 344 358 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 0.020057 57.52 By MS/MS 1 0 0 0 794 1550 895 2140 2145 2145 2930;2931;8204;8205 1 DGQAMLWDLNEGK SLCASGGKDGQAMLWD LWDLNEGKHLYTLDGG K D G G K H 1 0 1 2 0 1 1 2 0 0 2 1 1 0 0 0 0 1 0 0 0 0 13 0 1475.6715 D6RFX4;D6R9Z1;D6R9L0;P63244;D6RAC2;J3KPE3;H0Y8W2;D6REE5;H0Y8R5;H0YAF8;H0YAM7 D6RFX4 172 184 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.0019895 98.803 By MS/MS By MS/MS 1 1 11681000 6514600 5166400 795 728 896 2141;2142 2146;2147 2146 278 2 DGQDAIAQSPEKESK DSEASKPKDGQDAIAQ QSPEKESKDYEMNANH K D G S K D 2 0 0 2 0 2 2 1 0 1 0 2 0 0 1 2 0 0 0 0 0 0 15 1 1601.7533 Q9NWH9;H0YL55;H7BXE3 Q9NWH9 281 295 SLTM SAFB-like transcription modulator yes no 2;3 0.00037274 115.66 By MS/MS By MS/MS 2 1 77662000 64958000 12704000 796 2933 897 2143;2144;2145 2148;2149;2150 2149 6186 3 DGQSRTVRQFQFTDWPEQGVPK EFKVTDARDGQSRTVR WPEQGVPKSGEGFIDF R D G P K S 0 2 0 2 0 4 1 2 0 0 0 1 0 2 2 1 2 1 0 2 0 0 22 2 2605.2673 Q3KPI9;F5GWR7;P23468;G8JL96;A0A0A0MR60;Q13332 Q3KPI9 1378 1399 PTPRD;PTPRS Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta;Receptor-type tyrosine-protein phosphatase S yes no 3 0.024068 45.844 By MS/MS By matching 1 1 22442000 11799000 10643000 797 940 898 2146;2147 2151 2151 1760 0 DGQVINETSQHHDDLE LIKTVETRDGQVINET SQHHDDLE________ R D G L E - 0 0 1 3 0 2 2 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 16 0 1835.7922 P08670 P08670 451 466 VIM Vimentin yes yes 2;3 1.7546E-41 174.39 By MS/MS By MS/MS 3 3 295810000 166950000 128860000 798 1663 899;900 2148;2149;2150;2151;2152;2153 2152;2153;2154;2155;2156;2157 2157 3134;7380 6 DGSGTPSRHSLSGSSPGMK SGSSPGLRDGSGTPSR SGSSPGMKDIPRTPSR R D G M K D 0 1 0 1 0 0 0 4 1 0 1 1 1 0 2 6 1 0 0 0 0 0 19 1 1843.8483 Q9UQ35 Q9UQ35 1449 1467 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.018095 51.127 By matching By MS/MS 1 1 15994000 8896800 7097700 799 3074 901 2154;2155 2158 2158 6509;6510;6511;6512;6513 0 DGSLASNPYSGDLTK PTTPLTGRDGSLASNP PYSGDLTKFGRGDASS R D G T K F 1 0 1 2 0 0 0 2 0 0 2 1 0 0 1 3 1 0 1 0 0 0 15 0 1523.7104 F8W726;Q14157;H0Y5H6;H7C2T8 F8W726 861 875 UBAP2L Ubiquitin-associated protein 2-like yes no 2 0.0066429 84.31 By MS/MS 1 2902000 0 2902000 800 1035 902 2156 2159 2159 7161 1 DGSSPPLLEK KTAVQDRKDGSSPPLL SSPPLLEKQTVTKDVT K D G E K Q 0 0 0 1 0 0 1 1 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 0 1041.5342 Q6W2J9;H7BYY2 Q6W2J9 420 429 BCOR BCL-6 corepressor yes no 2 0.012172 72.34 By MS/MS By MS/MS 1 1 67411000 36466000 30945000 801 2343 903 2157;2158 2160;2161 2160 4740 2 DGTAPPPQSPGSPGTGQDEEWSDEESPRK LTSIVPTRDGTAPPPQ SDEESPRKAATGVRVR R D G R K A 1 1 0 3 0 2 4 4 0 0 0 1 0 0 6 4 2 1 0 0 0 0 29 1 3037.3173 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 333 361 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 3 0.0035072 52.97 By MS/MS By MS/MS 1 1 65565000 22209000 43355000 802 318 904 2159;2160 2162;2163 2163 551 2 DGWNQNHFITPVSTLER DLRSIYKKDGWNQNHF TPVSTLERDRFKSHPS K D G E R D 0 1 2 1 0 1 1 1 1 1 1 0 0 1 1 1 2 1 0 1 0 0 17 0 2012.9704 Q99569;A0A0D9SF60 Q99569 1004 1020 PKP4 Plakophilin-4 yes no 3 9.2889E-05 103.67 By MS/MS By MS/MS 1 1 27155000 12176000 14979000 803 2726 905 2161;2162 2164;2165 2165 5657;7819 2 DHANYEEDENGDITPIK GKKFARKRDHANYEED NGDITPIKAKKMFLKP R D H I K A 1 0 2 3 0 0 3 1 1 2 0 1 0 0 1 0 1 0 1 0 0 0 17 0 1958.8494 Q99547;H3BSB3;H3BNT4 Q99547 134 150 MPHOSPH6 M-phase phosphoprotein 6 yes no 2 0.00012959 123.58 By MS/MS 1 10491000 10491000 0 804 2723 906 2163 2166 2166 7817 1 DHSPTPSVFNSDEER TRERERERDHSPTPSV VFNSDEERYRYREYAE R D H E R Y 0 1 1 2 0 0 2 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 15 0 1715.7387 Q6UN15 Q6UN15 490 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 2;3 5.5399E-54 192.22 By MS/MS By MS/MS 4 3 470070000 304490000 165580000 805 2338 907;908 2164;2165;2166;2167;2168;2169;2170 2167;2168;2169;2170;2171;2172;2173;2174 2172 4723;4724;7671 8 DHTVSGDEDYCPR YRFNHHCKDHTVSGDE GDEDYCPRSKKANLGK K D H P R S 0 1 0 3 1 0 1 1 1 0 0 0 0 0 1 1 1 0 1 1 0 0 13 0 1549.6103 Q9UIG0 Q9UIG0 943 955 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.019425 65.895 By matching By MS/MS 1 1 19146000 9755300 9390600 806 3009 909 2171;2172 2175 2175 6339 1 DHYQDPVPGITPSSSSR NGLFRWFKDHYQDPVP ITPSSSSRTRTPASIN K D H S R T 0 1 0 2 0 1 0 1 1 1 0 0 0 0 3 4 1 0 1 1 0 0 17 0 1841.8544 Q7KZ85 Q7KZ85 1513 1529 SUPT6H Transcription elongation factor SPT6 yes yes 2 0.000357 102.97 By matching By MS/MS 1 1 7416400 4503800 2912600 807 2363 910 2173;2174 2176;2177;2178 2176 4786;4787 3 DIAKMASISDQDMDAYLVEQSR SWVERYYRDIAKMASI AYLVEQSRLHASDFSV R D I S R L 3 1 0 4 0 2 1 0 0 2 1 1 2 0 0 3 0 0 1 1 0 0 22 1 2485.1465 P51805 P51805 1794 1815 PLXNA3 Plexin-A3 yes yes 3 0.031065 43.164 By MS/MS 1 0 0 0 808 1878 911 2175 2179 2179 734;735 1 DICNDVLSLLEK EKIETELRDICNDVLS DVLSLLEKFLIPNASQ R D I E K F 0 0 1 2 1 0 1 0 0 1 3 1 0 0 0 1 0 0 0 1 0 0 12 0 1417.7123 E7EX29;P63104;E7ESK7;B0AZS6 E7EX29 92 103 YWHAZ 14-3-3 protein zeta/delta yes no 2 1.7539E-05 134.13 By MS/MS 1 6614800 6614800 0 809 838 912 2176 2180 2180 1 DIDEVSSLLR CCSAKNLRDIDEVSSL DEVSSLLRTSIMSKQY R D I L R T 0 1 0 2 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1145.5928 P50990;H7C4C8 P50990 156 165 CCT8 T-complex protein 1 subunit theta yes no 2 0.00021125 132.76 By MS/MS By MS/MS 1 1 13166000 6717900 6448500 810 1871 913 2177;2178 2181;2182 2182 2 DIDHETVVEEQIIGENSPPDYSEYMTGK MWSSDEKKDIDHETVV YSEYMTGKKLPPGGIP K D I G K K 0 0 1 3 0 1 5 2 1 3 0 1 1 0 2 2 2 0 2 2 0 0 28 0 3194.4238 P25490;H0YJU4;H0YJV7 P25490 231 258 YY1 Transcriptional repressor protein YY1 yes no 3 2.5583E-07 86.191 By MS/MS By MS/MS 2 2 49575000 18940000 30634000 811 1763 914;915 2179;2180;2181;2182 2183;2184;2185 2183 664 3328 2 DIDISSPEFK VTGREGAKDIDISSPE DISSPEFKIKIPRHEL K D I F K I 0 0 0 2 0 0 1 0 0 2 0 1 0 1 1 2 0 0 0 0 0 0 10 0 1149.5554 Q09666 Q09666 172 181 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.00022162 122.18 By MS/MS By MS/MS 1 1 28931000 14864000 14067000 812 2020 916 2183;2184 2186;2187 2186 3909;3910 2 DIEISTEEEKDTGDLK SEASKENRDIEISTEE EKDTGDLKDSSLLKTK R D I L K D 0 0 0 3 0 0 4 1 0 2 1 2 0 0 0 1 2 0 0 0 0 0 16 1 1820.8527 Q4G0J3 Q4G0J3 333 348 LARP7 La-related protein 7 yes yes 2 0.0033192 95.236 By MS/MS By MS/MS 2 1 317210000 161900000 155310000 813 2194 917;918 2185;2186;2187 2188;2189;2190 2190 4370;7618 3 DIELVMSQANVSR DETGVEVKDIELVMSQ MSQANVSRAKAVRALK K D I S R A 1 1 1 1 0 1 1 0 0 1 1 0 1 0 0 2 0 0 0 2 0 0 13 0 1460.7293 F8VZJ2;F8W0W4;H0YHX9;Q13765;E9PAV3 F8VZJ2 101 113 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 2 0.011343 81.431 By MS/MS By MS/MS 1 1 8440700 3947400 4493300 814 841 919 2188;2189 2191;2192 2192 321 2 DIEVLSEDTDYEEDEVTKK KSPERLRKDIEVLSED EEDEVTKKRKDVKKDT K D I K K R 0 0 0 4 0 0 5 0 0 1 1 2 0 0 0 1 2 0 1 2 0 0 19 1 2256.0169 H0Y7Y8;H7C5R6;Q4LE39 H0Y7Y8 185 203 ARID4B AT-rich interactive domain-containing protein 4B yes no 2 0.0026843 70.944 By MS/MS By MS/MS 1 1 18617000 7206000 11411000 815 1141 920 2190;2191 2193;2194;2195 2194 2167;7201 3 DIIRQPSEEEIIK IPSAKKYKDIIRQPSE PSEEEIIKLAPPPKKA K D I I K L 0 1 0 1 0 1 3 0 0 4 0 1 0 0 1 1 0 0 0 0 0 0 13 1 1568.841 B1AKZ5;Q15121 B1AKZ5 88 100 PEA15 Astrocytic phosphoprotein PEA-15 yes no 2;3 0.0013932 102.65 By MS/MS By MS/MS 2 1 680890000 391310000 289580000 816 526 921 2192;2193;2194 2196;2197;2198 2197 987 3 DIISIAEDEDLR FDISLFYRDIISIAED IAEDEDLRVHFEESSK R D I L R V 1 1 0 3 0 0 2 0 0 3 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1387.6831 B1AHC9;P12956 B1AHC9 169 180 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.00079938 113.93 By MS/MS By MS/MS 1 1 16802000 8662700 8139400 817 518 922 2195;2196 2199;2200;2201 2199 3 DILIQYDR EASKKEIKDILIQYDR DILIQYDRTLLVADPR K D I D R T 0 1 0 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 1 0 0 0 8 0 1034.5397 M0R210;A0A087WZ27;P62249 M0R210 93 100 RPS16;ZNF90 40S ribosomal protein S16 yes no 2 0.020309 95.741 By matching By MS/MS 1 1 37422000 19583000 17838000 818 135 923 2197;2198 2202 2202 1 DILKEMFPYEASTPTGISASCR TEERRVERDILKEMFP TGISASCRRPIKGAAG R D I C R R 2 1 0 1 1 0 2 1 0 2 1 1 1 1 2 3 2 0 1 0 0 0 22 1 2472.1665 G5E972;P42167;H0YJH7 G5E972 303 324 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3 0.014085 51.963 By MS/MS By matching 1 1 19547000 9996600 9549900 819 1097 924 2199;2200 2203 2203 392 2060;7182 1 DILPAAEHQTTSPVQK KMCVPVLKDILPAAEH QTTSPVQKSYLGSTSM K D I Q K S 2 0 0 1 0 2 1 0 1 1 1 1 0 0 2 1 2 0 0 1 0 0 16 0 1733.8948 M0R2M4;Q7Z340 M0R2M4 87 102 ZNF551 Zinc finger protein 551 yes no 2 0.0023523 83.751 By matching By MS/MS 1 1 11337000 4856500 6480100 820 1423 925 2201;2202 2204 2204 2616 1 DINAYNCEEPTEK EDHLAWSKDINAYNCE NCEEPTEKLPFPIIDD K D I E K L 1 0 2 1 1 0 3 0 0 1 0 1 0 0 1 0 1 0 1 0 0 0 13 0 1581.6617 P30041 P30041 85 97 PRDX6 Peroxiredoxin-6 yes yes 2 0.02427 72.2 By MS/MS By MS/MS 2 2 19280000 11114000 8166600 821 1777 926;927 2203;2204;2205;2206 2205;2206 2206 8252 2 DINAYNCEEPTEKLPFPIIDDR EDHLAWSKDINAYNCE PFPIIDDRNRELAILL K D I D R N 1 1 2 3 1 0 3 0 0 3 1 1 0 1 3 0 1 0 1 0 0 0 22 1 2648.2428 P30041 P30041 85 106 PRDX6 Peroxiredoxin-6 yes yes 3 0.00025092 103.73 By MS/MS 2 12918000 0 12918000 822 1777 928;929 2207;2208 2207;2208 2208 8252 2 DINLQDEDWNEFNDINK PKFEPLVRDINLQDED NEFNDINKIIIRQPIR R D I N K I 0 0 4 4 0 1 2 0 0 2 1 1 0 1 0 0 0 1 0 0 0 0 17 0 2120.9287 Q6P2Q9;I3L0J9 Q6P2Q9 285 301 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 2 2.6964E-31 164.92 By matching By MS/MS 1 1 11243000 5112400 6130900 823 2318 930 2209;2210 2209;2210 2210 2 DINSLYDVSR LERYNMERDINSLYDV NSLYDVSRMYVDPSEI R D I S R M 0 1 1 2 0 0 0 0 0 1 1 0 0 0 0 2 0 0 1 1 0 0 10 0 1180.5724 A0A0A0MRF9;P16885 A0A0A0MRF9 748 757 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 2 0.00042167 122.96 By MS/MS By MS/MS 1 1 26588000 14074000 12515000 824 212 931 2211;2212 2211;2212 2211 8007 2 DINTFLGTPVQK KPAVGEEKDINTFLGT FLGTPVQKLDQPGNLP K D I Q K L 0 0 1 1 0 1 0 1 0 1 1 1 0 1 1 0 2 0 0 1 0 0 12 0 1331.7085 P46013 P46013 1794 1805 MKI67 Antigen KI-67 yes yes 2 0.00012417 124.07 By MS/MS By MS/MS 1 1 5419200 2252500 3166700 825 1833 932 2213;2214 2213;2214 2214 7444 2 DINTFVGTPVEK KAAVGEEKDINTFVGT FVGTPVEKLDLLGNLP K D I E K L 0 0 1 1 0 0 1 1 0 1 0 1 0 1 1 0 2 0 0 2 0 0 12 0 1318.6769 P46013 P46013 1916 1927 MKI67 Antigen KI-67 yes yes 2 7.1186E-07 134.04 By MS/MS By MS/MS 1 1 23392000 11796000 11596000 826 1833 933 2215;2216 2215;2216 2216 7445 2 DIPGLTDTTVPR VIVKKGEKDIPGLTDT LTDTTVPRRLGPKRAS K D I P R R 0 1 0 2 0 0 0 1 0 1 1 0 0 0 2 0 3 0 0 1 0 0 12 0 1283.6721 P62753;A2A3R5 P62753 120 131 RPS6 40S ribosomal protein S6 yes no 2 0.0095044 81.771 By MS/MS By MS/MS 1 1 13084000 5855600 7228100 827 1944 934 2217;2218 2217;2218 2218 2 DISGPSPSKK FVCDINEKDISGPSPS SGPSPSKKLKKSQCTP K D I K K L 0 0 0 1 0 0 0 1 0 1 0 2 0 0 2 3 0 0 0 0 0 0 10 1 1014.5346 S4R3D6;Q96GX9 S4R3D6 35 44 APIP Methylthioribulose-1-phosphate dehydratase yes no 2 0.013492 74.173 By MS/MS By MS/MS 2 2 37080000 19649000 17431000 828 2658 935 2219;2220;2221;2222 2219;2220;2221;2222 2220 5480 4 DISLDSELHDLR VIKSTATRDISLDSEL DSELHDLRLNLEAKEQ R D I L R L 0 1 0 3 0 0 1 0 1 1 3 0 0 0 0 2 0 0 0 0 0 0 12 0 1411.6943 H0YJ97;Q15643 H0YJ97 178 189 TRIP11 Thyroid receptor-interacting protein 11 yes no 2 0.00071522 105.19 By MS/MS By MS/MS 1 1 9060600 4203100 4857500 829 1194 936 2223;2224 2223;2224;2225 2223 2236 3 DISSSLNSLADSNAR VVCLFRRRDISSSLNS SLADSNAREFEEESKQ R D I A R E 2 1 2 2 0 0 0 0 0 1 2 0 0 0 0 5 0 0 0 0 0 0 15 0 1548.738 O94776 O94776 50 64 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.0047903 78.191 By MS/MS By MS/MS 1 1 19432000 7483600 11948000 830 1565 937 2225;2226 2226;2227 2227 2956;2957;2958 2 DITDPLSLNTCTDEGHVVLASPLK PVEILIPKDITDPLSL VVLASPLKTGRKRHRH K D I L K T 1 0 1 3 1 0 1 1 1 1 4 1 0 0 2 2 3 0 0 2 0 0 24 0 2594.2898 Q7L2J0 Q7L2J0 234 257 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 3 3.9024E-10 134.51 By MS/MS By MS/MS 1 1 115250000 57928000 57323000 831 2364 938 2227;2228 2228;2229;2230 2229 4791 3 DIVENYFMR CKQQCFSKDIVENYFM IVENYFMRDSGSKAAT K D I M R D 0 1 1 1 0 0 1 0 0 1 0 0 1 1 0 0 0 0 1 1 0 0 9 0 1185.5488 Q13263;M0R2I3 Q13263 128 136 TRIM28 Transcription intermediary factor 1-beta yes no 2 0.01466 84.743 By MS/MS By matching 1 1 7927700 4449800 3477900 832 2054 939 2229;2230 2231 2231 816 1 DIYDLKDQIQDVEGR DTSLSELRDIYDLKDQ QIQDVEGRYMQGLKEL R D I G R Y 0 1 0 4 0 2 1 1 0 2 1 1 0 0 0 0 0 0 1 1 0 0 15 1 1805.8796 C9JSU1;Q9Y608 C9JSU1 114 128 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2;3 0.0013299 82.202 By MS/MS By MS/MS 1 2 17754000 8036300 9717300 833 693 940 2231;2232;2233 2232;2233;2234 2232 8097 3 DIYLSPDR NEFWEANRDIYLSPDR DIYLSPDRTGSSFGKN R D I D R T 0 1 0 2 0 0 0 0 0 1 1 0 0 0 1 1 0 0 1 0 0 0 8 0 977.48181 Q15696 Q15696 345 352 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 yes yes 2 0.026523 66.595 By MS/MS By matching 1 1 14077000 6029000 8047900 834 2151 941 2234;2235 2235 2235 4273 1 DIYLSPDRTGSSFGK NEFWEANRDIYLSPDR RTGSSFGKNSERRERM R D I G K N 0 1 0 2 0 0 0 2 0 1 1 1 0 1 1 3 1 0 1 0 0 0 15 1 1641.7999 Q15696 Q15696 345 359 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 yes yes 2 0.0020066 93.427 By matching By MS/MS 1 1 41934000 25965000 15969000 835 2151 942 2236;2237 2236 2236 4273 1 DKAITPPLPESTVPFSNGVLK TETSSSPRDKAITPPL PFSNGVLKGELSDLGA R D K L K G 1 0 1 1 0 0 1 1 0 1 2 2 0 1 4 2 2 0 0 2 0 0 21 1 2209.1994 Q92667;I3NI36 Q92667 529 549 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 3 0.0007033 117.11 By MS/MS By MS/MS 1 1 14234000 7541100 6693000 836 2594 943 2238;2239 2237;2238;2239 2237 121 7761 2 DKAPVQPQQSPAAAPGGTDEKPSGK ________________ TDEKPSGKERRDAGDK R D K G K E 4 0 0 2 0 3 1 3 0 0 0 3 0 0 5 2 1 0 0 1 0 0 25 2 2460.2245 F8WBS8;C9JPC0;Q13200 F8WBS8 7 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 3 0.013772 55.718 By matching By MS/MS 1 1 78349000 39261000 39087000 837 682 944 2240;2241 2240 2240 1258 1 DKDDQEWESPSPPKPTVFISGVIAR TGDTKEEKDKDDQEWE FISGVIARGDKDFPPA K D K A R G 1 1 0 3 0 1 2 1 0 2 0 2 0 1 4 3 1 1 0 2 0 0 25 2 2797.3923 P51397 P51397 41 65 DAP Death-associated protein 1 yes yes 3 0.00248 67.827 By MS/MS By MS/MS 1 1 25678000 12454000 13224000 838 1875 945 2242;2243 2241;2242 2242 3635 2 DKDLNSK EMSKGQGKDKDLNSKS KDKDLNSKSASDLSED K D K S K S 0 0 1 2 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 7 1 818.4134 Q92541 Q92541 643 649 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 1 0.020591 54.205 By MS/MS 1 3498400 3498400 0 839 2581 946 2244 2243 2243 1 DKEAIQAYSESLMTSAPK SSSKKGSKDKEAIQAY SLMTSAPKGSVLQEAK K D K P K G 3 0 0 1 0 1 2 0 0 1 1 2 1 0 1 3 1 0 1 0 0 0 18 1 1967.951 B7ZKQ9 B7ZKQ9 455 472 SCARB1 yes yes 3 0.00014498 113.73 By MS/MS By matching 1 1 10734000 7202400 3532000 840 598 947 2245;2246 2244 2244 237 8086 1 DKEDTQVDSEARPMK VKTNGTVKDKEDTQVD DSEARPMKDETFGEYS K D K M K D 1 1 0 3 0 1 2 0 0 0 0 2 1 0 1 1 1 0 0 1 0 0 15 2 1747.8047 H3BLW5;P32004 H3BLW5 55 69 L1CAM Neural cell adhesion molecule L1 yes no 2 0.0038888 88.561 By MS/MS 1 0 0 0 841 1223 948 2247 2245 2245 7225 1 DKEISPSVTK QDKEKPEKDKEISPSV EISPSVTKKNTNKKTK K D K T K K 0 0 0 1 0 0 1 0 0 1 0 2 0 0 1 2 1 0 0 1 0 0 10 1 1102.587 Q8N488 Q8N488 95 104 RYBP RING1 and YY1-binding protein yes yes 2 0.0056688 91.701 By MS/MS 1 10794000 10794000 0 842 2470 949 2248 2246 2246 5050;5051 1 DKEVSDDEAEEK TLFVEKERDKEVSDDE SDDEAEEKEDKEEEKE R D K E K E 1 0 0 3 0 0 4 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 12 1 1392.5892 P07900;G3V2J8 P07900 227 238 HSP90AA1 Heat shock protein HSP 90-alpha yes no 2 7.1353E-86 224.67 By MS/MS By MS/MS 5 4 103060000 51960000 51101000 843 1656 950 2249;2250;2251;2252;2253;2254;2255;2256;2257 2247;2248;2249;2250;2251;2252;2253;2254;2255;2256;2257 2250 3122 11 DKEVSDDEAEEKEDK TLFVEKERDKEVSDDE EAEEKEDKEEEKEKEE R D K D K E 1 0 0 4 0 0 5 0 0 0 0 3 0 0 0 1 0 0 0 1 0 0 15 2 1764.7537 P07900;G3V2J8 P07900 227 241 HSP90AA1 Heat shock protein HSP 90-alpha yes no 3 3.8661E-07 131.31 By MS/MS By MS/MS 1 1 15831000 8843100 6987800 844 1656 951 2258;2259 2258;2259 2259 3122 2 DKFSPFPVQDRPESSLVFK TASPPRQKDKFSPFPV PESSLVFKDTLRTPPR K D K F K D 0 1 0 2 0 1 1 0 0 0 1 2 0 3 3 3 0 0 0 2 0 0 19 2 2222.1372 Q9UQ35 Q9UQ35 1185 1203 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0013094 87.429 By MS/MS By matching 1 1 88718000 86112000 2605200 845 3074 952 2260;2261 2260 2260 6514 1 DKKSPLIESTANMDNNQSQK NLLHSEKRDKKSPLIE MDNNQSQKTFKNKETL R D K Q K T 1 0 3 2 0 2 1 0 0 1 1 3 1 0 1 3 1 0 0 0 0 0 20 2 2247.0801 O14974;F8VZN8 O14974 296 315 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 3 0.012914 64.331 By MS/MS By matching 1 1 13522000 7389800 6131800 846 1463 953 2262;2263 2261 2261 526 2718 1 DKLCSPLSEPGDPSK TRTSGVQKDKLCSPLS SEPGDPSKCSSLELGP K D K S K C 0 0 0 2 1 0 1 1 0 0 2 2 0 0 3 3 0 0 0 0 0 0 15 1 1628.7716 Q5VUA4 Q5VUA4 2185 2199 ZNF318 Zinc finger protein 318 yes yes 2;3 1.77E-27 171.99 By MS/MS By MS/MS 3 3 53428000 28100000 25328000 847 2268 954;955 2264;2265;2266;2267;2268;2269 2262;2263;2264;2265 2263 4553;4554 4 DKLNTQSTYSEA VDGVKLKKDKLNTQST TQSTYSEA________ K D K E A - 1 0 1 1 0 1 1 0 0 0 1 1 0 0 0 2 2 0 1 0 0 0 12 1 1355.6205 Q5JWQ2;Q5JWQ6;E9PEP6;O14786 Q5JWQ2 94 105 NRP1 Neuropilin-1 yes no 2 0.014387 64.841 By MS/MS By matching 1 1 18113000 9626200 8487000 848 859 956 2270;2271 2266 2266 8124 0 DKMEGSDFESSGGR ARFEADLKDKMEGSDF DFESSGGRGLKSKSVN K D K G R G 0 1 0 2 0 0 2 3 0 0 0 1 1 1 0 3 0 0 0 0 0 0 14 1 1500.6151 E9PEN0;A0A1B0GW41;Q8WYH8 E9PEN0 113 126 ING5 Inhibitor of growth protein 5 yes no 2 0.0018532 94.639 By MS/MS By MS/MS 1 1 10402000 6596400 3805400 849 432 957 2272;2273 2267;2268;2269 2269 806 3 DKPSGDTAAVFEEGGDVDDLLDMI AKKFLAPKDKPSGDTA VDDLLDMI________ K D K M I - 2 0 0 6 0 0 2 3 0 1 2 1 1 1 1 1 1 0 0 2 0 0 24 1 2508.1214 P13010 P13010 709 732 XRCC5 X-ray repair cross-complementing protein 5 yes yes 2 0.014891 53.008 By matching By MS/MS 1 1 16856000 10855000 6001300 850 1690 958 2274;2275 2270 2270 628 1 DKPSVEPVEEYDYEDLK AQFIYSRRDKPSVEPV EYDYEDLKESSNSVSN R D K L K E 0 0 0 3 0 0 4 0 0 0 1 2 0 0 2 1 0 0 2 2 0 0 17 1 2053.9368 E9PN23;G5E991;E9PMN1;E9PLR4;Q9Y450;H0YD85;J3QT46 E9PN23 24 40 HBS1L HBS1-like protein yes no 2;3 2.0017E-91 214.48 By MS/MS By MS/MS 2 2 75562000 43834000 31728000 851 906 959 2276;2277;2278;2279 2271;2272;2273;2274;2275 2271 8130 5 DKPSVEPVEEYDYEDLKESSNSVSNHQLSGFDQAR AQFIYSRRDKPSVEPV LSGFDQARLYSCLDHM R D K A R L 1 1 2 4 0 2 5 1 1 0 2 2 0 1 2 6 0 0 2 3 0 0 35 2 3997.809 E9PN23;G5E991;E9PMN1;E9PLR4;Q9Y450 E9PN23 24 58 HBS1L HBS1-like protein yes no 4 0.0035268 50.396 By MS/MS 1 92250000 0 92250000 852 906 960 2280 2276 2276 1685;8130 1 DKPTYDEIFYTLSPVNGK DVEWVVGKDKPTYDEI TLSPVNGKITGANAKK K D K G K I 0 0 1 2 0 0 1 1 0 1 1 2 0 1 2 1 2 0 2 1 0 0 18 1 2086.0259 A0A024R571;Q9H4M9 A0A024R571 458 475 EHD1 EH domain-containing protein 1 yes no 3 3.8089E-05 122.65 By MS/MS By MS/MS 2 2 23480000 14206000 9274200 853 4 961;962 2281;2282;2283;2284 2277;2278;2279;2280 2278 0 4 4 DKRPLSGPDVGTPQPAGLASGAK GGPQESSRDKRPLSGP AGLASGAKLAAGRPFN R D K A K L 3 1 0 2 0 1 0 4 0 0 2 2 0 0 4 2 1 0 0 1 0 0 23 2 2218.1706 O96013 O96013 176 198 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 3 0.00030883 81.974 By MS/MS By MS/MS 1 1 105670000 58981000 46686000 854 1617 963 2285;2286 2281;2282 2281 3061;7360 2 DKSDSPAIQLR REVLGIKRDKSDSPAI DSPAIQLRLKEPMDVD R D K L R L 1 1 0 2 0 1 0 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 11 1 1228.6412 Q96ST3 Q96ST3 936 946 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.0027153 103.14 By MS/MS By matching 1 1 10436000 5399600 5036000 855 2712 964 2287;2288 2283 2283 5611 1 DKSPSSLLEDAK PALPRKQRDKSPSSLL SSLLEDAKETCFTRDR R D K A K E 1 0 0 2 0 0 1 0 0 0 2 2 0 0 1 3 0 0 0 0 0 0 12 1 1288.6511 P42684 P42684 629 640 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.022806 77.372 By matching By MS/MS 1 1 20657000 8460200 12197000 856 1828 965 2289;2290 2284 2284 3444 0 DKSPVREPIDNLTPEER RSKSPFRKDKSPVREP DNLTPEERDARTVFCM K D K E R D 0 2 1 2 0 0 3 0 0 1 1 1 0 0 3 1 1 0 0 1 0 0 17 2 1994.0069 G3XAC6;Q14498;Q5QP22;Q5QP23;H0Y4X3 G3XAC6 134 150 RBM39 RNA-binding protein 39 yes no 2;3 3.7621E-15 145.83 By MS/MS By MS/MS 2 2 1206800000 705190000 501650000 857 1089 966 2291;2292;2293;2294 2285;2286;2287;2288;2289;2290 2287 2048 6 DKSSANWMRYVNCAR CYEYVDGKDKSSANWM MRYVNCARDDEEQNLV K D K A R D 2 2 2 1 1 0 0 0 0 0 0 1 1 0 0 2 0 1 1 1 0 0 15 2 1856.841 Q9NQW5 Q9NQW5 309 323 PRDM7 Probable histone-lysine N-methyltransferase PRDM7 yes yes 2 0.025101 47.288 By matching By MS/MS 1 1 12428000 8154700 4273300 858 2899 967 2295;2296 2291 2291 1147 0 DKVTIADDYSDPFDAK EESGAGKKDKVTIADD YSDPFDAKNDLKSKAG K D K A K N 2 0 0 5 0 0 0 0 0 1 0 2 0 1 1 1 1 0 1 1 0 0 16 1 1798.8261 Q15464 Q15464 238 253 SHB SH2 domain-containing adapter protein B yes yes 2 5.8312E-06 111.72 By matching By MS/MS 1 1 20856000 10909000 9947800 859 2142 968 2297;2298 2292 2292 4250 0 DKYEPAAVSEQGDKK ________________ VSEQGDKKGKKGKKDR R D K K K G 2 0 0 2 0 1 2 1 0 0 0 3 0 0 1 1 0 0 1 1 0 0 15 2 1663.8053 P05023 P05023 8 22 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 3 0.026052 44.598 By matching By MS/MS 1 1 10392000 5325100 5067400 860 1637 969 2299;2300 2293 2293 0 DLADELALVDVIEDK CAISILMKDLADELAL LVDVIEDKLKGEMMDL K D L D K L 2 0 0 4 0 0 2 0 0 1 3 1 0 0 0 0 0 0 0 2 0 0 15 0 1656.8458 P00338;F5GXH2;F5GYU2;F5GXY2;F5GZQ4;F5H5J4;F5H6W8 P00338 43 57 LDHA L-lactate dehydrogenase A chain yes no 2 3.9647E-11 171.26 By MS/MS 1 0 0 0 861 1621 970 2301 2294 2294 1 DLAGNEQRTLIK FRFAKYYRDLAGNEQR NEQRTLIKAYGIRFDI R D L I K A 1 1 1 1 0 1 1 1 0 1 2 1 0 0 0 0 1 0 0 0 0 0 12 1 1356.7361 F6SFZ6;Q99571 F6SFZ6 302 313 P2RX4 P2X purinoceptor;P2X purinoceptor 4 yes no 3 0.0042587 77.062 By MS/MS 1 0 0 0 862 992 971 2302 2295 2295 43 7148 1 DLAGSIIGK TTQVTIPKDLAGSIIG LAGSIIGKGGQRIKQI K D L G K G 1 0 0 1 0 0 0 2 0 2 1 1 0 0 0 1 0 0 0 0 0 0 9 0 872.49673 P61978;S4R359 P61978 397 405 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.012592 85.161 By MS/MS By MS/MS 1 1 14854000 6424800 8429100 863 1931 972 2303;2304 2296;2297 2297 2 DLDDFQSWLSR SKLQQFLRDLDDFQSW DFQSWLSRTQTAIASE R D L S R T 0 1 0 3 0 1 0 0 0 0 2 0 0 1 0 2 0 1 0 0 0 0 11 0 1380.631 A0A087WUZ3;Q01082 A0A087WUZ3 1070 1080 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.013293 102.95 By MS/MS 1 0 0 0 864 67 973 2305 2298 2298 1 DLDEDELLGNLSETELK RKDLEKYKDLDEDELL NLSETELKQLE_____ K D L L K Q 0 0 1 3 0 0 4 1 0 0 5 1 0 0 0 1 1 0 0 0 0 0 17 0 1931.9211 H0YNU8;Q9NYL9 H0YNU8 14 30 TMOD3 Tropomodulin-3 yes no 2 0.00078073 112.3 By MS/MS 1 8444900 0 8444900 865 1220 974 2306 2299 2299 2281;7223 1 DLDEEGSEK FEENGLEKDLDEEGSE LDEEGSEKELHENVLD K D L E K E 0 0 0 2 0 0 3 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 1020.4247 O43719 O43719 573 581 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.011932 75.566 By MS/MS By MS/MS 1 2 40090000 18083000 22006000 866 1505 975 2307;2308;2309 2300;2301;2302 2302 2815 3 DLDEEGSEKELHENVLDK FEENGLEKDLDEEGSE LHENVLDKELEENDSE K D L D K E 0 0 1 3 0 0 5 1 1 0 3 2 0 0 0 1 0 0 0 1 0 0 18 1 2097.9702 O43719 O43719 573 590 HTATSF1 HIV Tat-specific factor 1 yes yes 2;3 0.00011072 116.27 By MS/MS By MS/MS 2 2 843400000 537390000 306010000 867 1505 976 2310;2311;2312;2313 2303;2304;2305;2306 2304 2815 4 DLDLLASVPSPSSSGSR KTSNTLEKDLDLLASV SPSSSGSRKVVGSMPT K D L S R K 1 1 0 2 0 0 0 1 0 0 3 0 0 0 2 6 0 0 0 1 0 0 17 0 1686.8424 A0A087WV97;Q8WU79 A0A087WV97 205 221 SMAP2 Stromal membrane-associated protein 2 yes no 2 2.4776E-06 126.63 By MS/MS By MS/MS 1 1 28339000 16710000 11629000 868 73 977 2314;2315 2307;2308;2309;2310 2308 132;133 4 DLELALSPIHNSSALPTTGR ETKGFNKKDLELALSP SALPTTGRSCVNLAKK K D L G R S 2 1 1 1 0 0 1 1 1 1 4 0 0 0 2 3 2 0 0 0 0 0 20 0 2091.096 A0A087WUU7;Q96GX5 A0A087WUU7 36 55 MASTL Serine/threonine-protein kinase greatwall yes no 2;3 1.8059E-07 131.25 By MS/MS By MS/MS 2 2 57968000 30288000 27680000 869 62 978 2316;2317;2318;2319 2311;2312;2313 2313 112 3 DLEPGEVPSDSDEDGEHK SLRKRSVRDLEPGEVP SDEDGEHKSHSPRASA R D L H K S 0 0 0 4 0 0 4 2 1 0 1 1 0 0 2 2 0 0 0 1 0 0 18 0 1953.8076 Q96T58 Q96T58 1372 1389 SPEN Msx2-interacting protein yes yes 2;3 1.4942E-06 118.23 By MS/MS By MS/MS 2 4 14311000 8024200 6287100 870 2716 979;980 2320;2321;2322;2323;2324;2325 2314;2315;2316;2317 2316 5624;5625 4 DLFAFQESPPR GEKRQVRRDLFAFQES AFQESPPRFLPSHPIV R D L P R F 1 1 0 1 0 1 1 0 0 0 1 0 0 2 2 1 0 0 0 0 0 0 11 0 1305.6354 E7EX48;P51957 E7EX48 467 477 NEK4 Serine/threonine-protein kinase Nek4 yes no 2 7.6678E-05 121.21 By MS/MS By MS/MS 1 1 5192300 5192300 0 871 839 981 2326;2327 2318;2319 2318 1567 2 DLFDLNSSEEDDTEGFSER DEDRKQFKDLFDLNSS DTEGFSERGILRPLST K D L E R G 0 1 1 4 0 0 4 1 0 0 2 0 0 2 0 3 1 0 0 0 0 0 19 0 2203.9029 Q9Y3T9 Q9Y3T9 666 684 NOC2L Nucleolar complex protein 2 homolog yes yes 2;3 5.8053E-86 206.45 By MS/MS By MS/MS 2 8 51204000 36037000 15167000 872 3112 982;983 2328;2329;2330;2331;2332;2333;2334;2335;2336;2337 2320;2321;2322;2323;2324;2325;2326;2327;2328;2329 2320 6670;6671 10 DLFDPIIEDR EESYEVFKDLFDPIIE FDPIIEDRHGGYKPSD K D L D R H 0 1 0 3 0 0 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 10 0 1231.6085 P12277;G3V4N7;G3V461 P12277 87 96 CKB Creatine kinase B-type yes no 2 0.00020731 117.53 By MS/MS By MS/MS 1 1 102700000 58869000 43832000 873 1687 984 2338;2339 2330;2331 2331 2 DLFDYSPPLHK QVKSEKLKDLFDYSPP DYSPPLHKNLDAREKS K D L H K N 0 0 0 2 0 0 0 0 1 0 2 1 0 1 2 1 0 0 1 0 0 0 11 0 1330.6558 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 507 517 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 8.0837E-29 184.87 By MS/MS By MS/MS 2 3 320750000 174210000 146550000 874 2947 985 2340;2341;2342;2343;2344 2332;2333;2334;2335;2336;2337;2338;2339;2340;2341;2342;2343;2344;2345 2334 6213 14 DLFSLDSEDPSPASPPLR EQILRTGRDLFSLDSE SPASPPLRSSGSSLFP R D L L R S 1 1 0 3 0 0 1 0 0 0 3 0 0 1 4 4 0 0 0 0 0 0 18 0 1941.932 H3BTX0;Q9BTK6 H3BTX0 54 71 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes no 2;3 2.5641E-68 200.2 By MS/MS By MS/MS 2 1 343470000 229020000 114440000 875 1255 986 2345;2346;2347 2346;2347;2348 2346 2335 3 DLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI LSLKNKLKDLGHPVEE PGKDLDHI________ K D L H I - 0 0 0 9 0 1 9 3 2 1 3 1 0 0 2 2 0 0 0 1 0 0 34 1 3835.5464 O60763 O60763 929 962 USO1 General vesicular transport factor p115 yes yes 3 1.4019E-14 104.83 By MS/MS 1 0 0 0 876 1526 987 2348 2349 2349 2881 1 DLGNPNTAPPTPELHGINPVFLSSNPSR VRAGHGERDLGNPNTA FLSSNPSRWSVEEVYE R D L S R W 1 1 4 1 0 0 1 2 1 1 3 0 0 1 6 3 2 0 0 1 0 0 28 0 2940.473 J3KQH6;P78364 J3KQH6 867 894 PHC1 Polyhomeotic-like protein 1 yes no 3 0.00066487 60.814 By MS/MS By MS/MS 1 1 49651000 24595000 25056000 877 1329 988 2349;2350 2350;2351;2352 2350 7249 3 DLGSTEDGDGTDDFLTDKEDEK PPELFTRKDLGSTEDG LTDKEDEKAKPPREKA K D L E K A 0 0 0 7 0 0 3 3 0 0 2 2 0 1 0 1 3 0 0 0 0 0 22 1 2400.9929 Q15527 Q15527 180 201 SURF2 Surfeit locus protein 2 yes yes 2;3 2.7719E-05 98.973 By MS/MS By MS/MS 4 4 152340000 80634000 71710000 878 2144 989 2351;2352;2353;2354;2355;2356;2357;2358 2353;2354;2355;2356;2357;2358 2353 4255;7601;7602 6 DLHQGIEAASDEEDLR EKFHELHRDLHQGIEA ASDEEDLRWWRSTHGP R D L L R W 2 1 0 3 0 1 3 1 1 1 2 0 0 0 0 1 0 0 0 0 0 0 16 0 1796.8177 A0A0C4DGG1;Q9UKS6;E9PIY1 A0A0C4DGG1 267 282 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 2;3 0.0019998 86.479 By MS/MS By matching 2 2 22076000 14098000 7977800 879 318 990 2359;2360;2361;2362 2359;2360;2361 2359 552 2 DLHQPSLSPASPHSQGFER EAYPTPTKDLHQPSLS PHSQGFERGKEDISQN K D L E R G 1 1 0 1 0 2 1 1 2 0 2 0 0 1 3 4 0 0 0 0 0 0 19 0 2088.9977 F8VQX7;Q9BZF1;F8VVD3;F8VVE7;F8VZ43 F8VQX7 58 76 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 yes no 3 0.0041745 60.062 By MS/MS By MS/MS 2 2 29545000 18094000 11451000 880 1003 991 2363;2364;2365;2366 2362;2363;2364 2364 1890;1891 3 DLIDNSFNR ASSKKAKRDLIDNSFN LIDNSFNRYTFNEDEG R D L N R Y 0 1 2 2 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1092.52 Q8IY81 Q8IY81 683 691 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.016541 69.672 By MS/MS By matching 1 1 16306000 7569000 8736700 881 2438 992 2367;2368 2365 2365 4985 1 DLIHDQDEDEEEEEGQR DNRVTSFRDLIHDQDE EEEEEGQRFYAGGSER R D L Q R F 0 1 0 4 0 2 6 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 17 0 2084.8407 Q9UNZ2;F2Z2K0;R4GNE6 Q9UNZ2 77 93 NSFL1C NSFL1 cofactor p47 yes no 3 4.6426E-41 151.11 By MS/MS By MS/MS 1 1 18071000 12066000 6004900 882 3063 993 2369;2370 2366;2367 2366 2 DLIQRSVQDSGQGGREK ASCSLYFKDLIQRSVQ SGQGGREKLELVLSNL K D L E K L 0 2 0 2 0 3 1 3 0 1 1 1 0 0 0 2 0 0 0 1 0 0 17 2 1871.945 H0Y2P5;Q96CT2 H0Y2P5 196 212 KLHL29 Kelch-like protein 29 yes no 3 0.028628 52.522 By MS/MS 1 0 0 0 883 1111 994 2371 2368 2368 1 DLKLQAGSDLRR PDNAKPNRDLKLQAGS QAGSDLRRRRRDLGPH R D L R R R 1 2 0 2 0 1 0 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 12 2 1370.763 Q9HBR0 Q9HBR0 1040 1051 SLC38A10 Putative sodium-coupled neutral amino acid transporter 10 yes yes 2 0.020587 63.76 By MS/MS 1 0 0 0 884 2870 995 2372 2369 2369 6040 1 DLLEEEEAWEASHKNDLQDTEISPR SSSSDIIRDLLEEEEA QDTEISPRQNRRTRAA R D L P R Q 2 1 1 3 0 1 6 0 1 1 3 1 0 0 1 2 1 1 0 0 0 0 25 1 2953.3577 Q9NS91 Q9NS91 449 473 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 3 0.0090274 51.431 By MS/MS By matching 1 1 16630000 9562700 7067400 885 2913 996 2373;2374 2370 2370 6144;7877 1 DLLEVADVLEK YGIQAFCKDLLEVADV EVADVLEKATQCVPKE K D L E K A 1 0 0 2 0 0 2 0 0 0 3 1 0 0 0 0 0 0 0 2 0 0 11 0 1242.6707 Q9HAV7 Q9HAV7 110 120 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 2 0.0045466 93.556 By MS/MS 1 2283200 0 2283200 886 2860 997 2375 2371 2371 1 DLLGAISGIASPYTTSTPNINSVRNADSR TLDNSLHKDLLGAISG SVRNADSRGSLISTDS K D L S R G 3 2 3 2 0 0 0 2 0 3 2 0 0 0 2 5 3 0 1 1 0 0 29 1 2989.5105 Q9BZ29;Q6ZSL5;A0A088AWN3;A0A0A0MSY4 Q9BZ29 1225 1253 DOCK9 Dedicator of cytokinesis protein 9 yes no 3 0.028694 49.297 By MS/MS 1 0 0 0 887 2781 998 2376 2372 2372 1 DLLHPSPEEEK ________________ HPSPEEEKRKHKKKRL K D L E K R 0 0 0 1 0 0 3 0 1 0 2 1 0 0 2 1 0 0 0 0 0 0 11 0 1292.6248 P42677;Q5T4L4 P42677 6 16 RPS27 40S ribosomal protein S27 yes no 2 0.0084865 76.17 By matching By MS/MS 1 1 19158000 11780000 7377800 888 1826 999 2377;2378 2373 2373 3442 1 DLLSDLQDISDSER KEEKMEERDLLSDLQD QDISDSERKTSSAESS R D L E R K 0 1 0 4 0 1 1 0 0 1 3 0 0 0 0 3 0 0 0 0 0 0 14 0 1604.753 J3QR29;A0A0D9SEI3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;P21127;J3KS35;E7ESP2;Q5QPR4;Q5QPR3;Q9UQ88 Q5QPR4 227 240 CDK11B;CDC2L1;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 2 2.8078E-173 264.85 By MS/MS By MS/MS 1 1 99064000 55062000 44002000 889 333;2230 1000 2379;2380 2374;2375;2376 2376 587 3 DLLVSSGSNNSLPCGSPK GEVNHNQKDLLVSSGS SLPCGSPKKCNLKGAF K D L P K K 0 0 2 1 1 0 0 2 0 0 3 1 0 0 2 5 0 0 0 1 0 0 18 0 1830.8782 Q5THK1 Q5THK1 1014 1031 PRR14L Protein PRR14L yes yes 2 0.0015679 87.831 By MS/MS By MS/MS 1 1 43146000 19534000 23612000 890 2258 1001 2381;2382 2377;2378 2377 4514 2 DLPLLLFR RPEVPLRRDLPLLLFR DLPLLLFRTQTSDPAM R D L F R T 0 1 0 1 0 0 0 0 0 0 4 0 0 1 1 0 0 0 0 0 0 0 8 0 985.59605 Q5SZU1;O43175 Q5SZU1 428 435 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.0066898 114.72 By MS/MS 1 947290 0 947290 891 1489 1002 2383 2379 2379 1 DLPPFEDESEGLLGTEGPLEEEEDGEELIGDGMER ALTSSPGRDLPPFEDE LIGDGMERDYRAIPEL R D L E R D 0 1 0 4 0 0 11 6 0 1 5 0 1 1 3 1 1 0 0 0 0 0 35 0 3831.668 P49736;C9J013;C9JZ21;F8WDM3 P49736 45 79 MCM2 DNA replication licensing factor MCM2 yes no 3 4.0351E-05 61.504 By MS/MS By MS/MS 1 1 51200000 28229000 22971000 892 1857 1003 2384;2385 2380;2381 2380 720 7467 2 DLPTIPGVTSPSSDEPPMEASQSHLR PVTKTPPRDLPTIPGV EASQSHLRNSPEDKRA R D L L R N 1 1 0 2 0 1 2 1 1 1 2 0 1 0 5 5 2 0 0 1 0 0 26 0 2747.3072 Q13541 Q13541 74 99 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 3 4.5552E-06 83.115 By MS/MS By MS/MS 2 2 96977000 39124000 57853000 893 2063 1004;1005 2386;2387;2388;2389 2382;2383;2384 2383 822 4069;4070;4071;7556 3 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKR PVTKTPPRDLPTIPGV RNSPEDKRAGGEESQF R D L K R A 1 2 1 3 0 1 3 1 1 1 2 1 1 0 6 6 2 0 0 1 0 0 33 2 3573.7006 Q13541 Q13541 74 106 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 4 0.0012702 52.192 By MS/MS By MS/MS 1 1 71400000 33118000 38282000 894 2063 1006 2390;2391 2385;2386 2386 822 4069;4070;4071;4072;7556 1 DLQEQDADAGSER EKVKALLRDLQEQDAD DADAGSERGLSGEEED R D L E R G 2 1 0 3 0 2 2 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 13 0 1432.6066 Q6P158;A0A087WW12;A0A087WZ11 Q6P158 117 129 DHX57 Putative ATP-dependent RNA helicase DHX57 yes no 2 1.3136E-10 143.64 By MS/MS By MS/MS 2 2 78472000 39848000 38624000 895 2314 1007 2392;2393;2394;2395 2387;2388;2389;2390 2387 4665 4 DLQSPDFTTGFHSDKIEAK YAGVGSPRDLQSPDFT HSDKIEAKVKPYVNGT R D L A K V 1 0 0 3 0 1 1 1 1 1 1 2 0 2 1 2 2 0 0 0 0 0 19 1 2135.0171 E9PDR5;E7EPI0;Q9P2D0 E9PDR5 841 859 IBTK Inhibitor of Bruton tyrosine kinase yes no 3 0.0035396 64.249 By MS/MS By MS/MS 1 1 74322000 40912000 33410000 896 799 1008 2396;2397 2391;2392 2391 1427 2 DLRSPLIATPTFVADKDGAR TEKIYIRKDLRSPLIA VADKDGARQTGLLDPG K D L A R Q 3 2 0 3 0 0 0 1 0 1 2 1 0 1 2 1 2 0 0 1 0 0 20 2 2142.1433 P49116 P49116 216 235 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes yes 3 0.0067538 67.168 By MS/MS By matching 1 1 16248000 7397400 8850900 897 1850 1009 2398;2399 2393 2393 3558 1 DLRSPLTATPTFVTDSESTR TEKIYIRKDLRSPLTA VTDSESTRSTGLLDSG K D L T R S 1 2 0 2 0 0 1 0 0 0 2 0 0 1 2 3 5 0 0 1 0 0 20 1 2193.0913 A0A087WUK4;P13056 A0A087WUK4 212 231 NR2C1 Nuclear receptor subfamily 2 group C member 1 yes no 3 0.00024419 91.64 By MS/MS By MS/MS 1 1 15325000 7634200 7690600 898 55 1010 2400;2401 2394;2395 2395 6844 2 DLSFLLDKK RKKNAPKRDLSFLLDK LSFLLDKKAVLPTPVT R D L K K A 0 0 0 2 0 0 0 0 0 0 3 2 0 1 0 1 0 0 0 0 0 0 9 1 1077.607 O75151 O75151 703 711 PHF2 Lysine-specific demethylase PHF2 yes yes 2 0.0015704 121.29 By MS/MS By MS/MS 1 1 4999100 2977000 2022100 899 1537 1011 2402;2403 2396;2397 2397 2901 2 DLSHIGDAVVISCAK GEFARICRDLSHIGDA AVVISCAKDGVKFSAS R D L A K D 2 0 0 2 1 0 0 1 1 2 1 1 0 0 0 2 0 0 0 2 0 0 15 0 1583.7977 P12004 P12004 150 164 PCNA Proliferating cell nuclear antigen yes yes 3 0.0036171 83.729 By MS/MS 1 0 0 0 900 1685 1012 2404 2398 2398 1 DLSLEEIQK PLSPPKKKDLSLEEIQ LSLEEIQKKLEAAEER K D L Q K K 0 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1073.5605 E5RGX5;Q93045;A2A2D0;P16949 A2A2D0 44 52 STMN2;STMN1 Stathmin;Stathmin-2 no no 2 0.0045727 101.3 By MS/MS By MS/MS 1 1 74339000 33814000 40526000 901 447;779 1013 2405;2406 2399;2400 2400 836 2 DLSMSEEDQMMR PIMGGVVRDLSMSEED SEEDQMMRAIAMSLGQ R D L M R A 0 1 0 2 0 1 2 0 0 0 1 0 3 0 0 2 0 0 0 0 0 0 12 0 1470.5789 Q7Z6Z7 Q7Z6Z7 1366 1377 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0090599 64.827 By MS/MS By matching 2 2 21589000 11190000 10399000 902 2394 1014 2407;2408;2409;2410 2401;2402 2402 969;970;971 4884 1 DLSPTLIDNSAAK GLQSPPSRDLSPTLID LIDNSAAKQLARNTVT R D L A K Q 2 0 1 2 0 0 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 13 0 1343.6933 Q9P2B4 Q9P2B4 486 498 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 2 0.0010909 94.673 By MS/MS By MS/MS 1 1 63920000 35090000 28831000 903 2976 1015 2411;2412 2403;2404 2403 6264 2 DLSQESSSTAPGSEVTIKQEPVSPK LTAEATGKDLSQESSS KQEPVSPKKKENALLR K D L P K K 1 0 0 1 0 2 3 1 0 1 1 2 0 0 3 6 2 0 0 2 0 0 25 1 2600.2817 E7EWM1;Q15596 E7EWM1 714 738 NCOA2 Nuclear receptor coactivator 2 yes no 3 0.00010348 77.509 By MS/MS By MS/MS 1 1 21980000 10695000 11285000 904 835 1016 2413;2414 2405;2406 2405 1558 2 DLSSSPPGPYGQEMYAFR ESSETSCRDLSSSPPG GQEMYAFRSEERFKSP R D L F R S 1 1 0 1 0 1 1 2 0 0 1 0 1 1 3 3 0 0 2 0 0 0 18 0 2000.8938 O43741 O43741 180 197 PRKAB2 5-AMP-activated protein kinase subunit beta-2 yes yes 2;3 0.0028017 65.905 By MS/MS By MS/MS 1 1 25743000 20700000 5042900 905 1506 1017 2415;2416 2407;2408 2408 543 2828;2829 2 DLSTSPKPSPIPSPVLGR ENTVSAGKDLSTSPKP IPSPVLGRKPNASQSL K D L G R K 0 1 0 1 0 0 0 1 0 1 2 1 0 0 5 4 1 0 0 1 0 0 18 1 1847.0153 Q8NDI1 Q8NDI1 424 441 EHBP1 EH domain-binding protein 1 yes yes 2;3 0.0035316 82.36 By MS/MS By MS/MS 3 4 36730000 11514000 25217000 906 2509 1018;1019;1020 2417;2418;2419;2420;2421;2422;2423 2409;2410;2411;2412;2413;2414 2411 5124;5125;5126;5127;7734 5 DLSTVEALQNLK NLSGNKIKDLSTVEAL VEALQNLKNLKSLDLF K D L L K N 1 0 1 1 0 1 1 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 12 0 1329.714 E9PPH5;Q9BTT0 E9PPH5 52 63 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes no 2 0.00026129 121.5 By MS/MS By MS/MS 1 1 6825700 3302200 3523500 907 921 1021 2424;2425 2415;2416 2416 2 DLVAQAPLKPKTPR LPLATIVKDLVAQAPL PLKPKTPRGTKTPINR K D L P R G 2 1 0 1 0 1 0 0 0 0 2 2 0 0 3 0 1 0 0 1 0 0 14 2 1532.9039 O94776 O94776 523 536 MTA2 Metastasis-associated protein MTA2 yes yes 3 0.017172 49.356 By matching By MS/MS 1 1 7730100 4928500 2801600 908 1565 1022 2426;2427 2417 2417 0 DLVLPTQALPASPALK AFAKLDQKDLVLPTQA LPASPALKNKRPRKDE K D L L K N 3 0 0 1 0 1 0 0 0 0 4 1 0 0 3 1 1 0 0 1 0 0 16 0 1632.9451 J3KSZ6;U3KQ35;H3BR06;Q15554 J3KSZ6 98 113 TERF2 Telomeric repeat-binding factor 2 yes no 2;3 1.2349E-11 144.15 By MS/MS By MS/MS 2 2 340740000 197820000 142920000 909 1245 1023 2428;2429;2430;2431 2418;2419;2420;2421 2418 2322 4 DLVQPDKPASPK SGHLMQTRDLVQPDKP PDKPASPKFIVTLDGV R D L P K F 1 0 0 2 0 1 0 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 12 1 1293.6929 H0YJA2;Q6PJT7;G3V4R5;G3V411 H0YJA2 422 433 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 3 0.00027864 100.18 By MS/MS By MS/MS 1 1 21206000 10538000 10669000 910 1195 1024 2432;2433 2422;2423 2422 2237 2 DLYANTVLSGGTTMYPGIADR KCDVDIRKDLYANTVL MYPGIADRMQKEITAL K D L D R M 2 1 1 2 0 0 0 3 0 1 2 0 1 0 1 1 3 0 2 1 0 0 21 0 2214.0627 P63261;P60709 P63261 292 312 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2;3 3.3625E-26 162.79 By MS/MS By MS/MS 2 2 127790000 68523000 59270000 911 1928 1025 2434;2435;2436;2437 2424;2425;2426;2427;2428 2424 751 5 DLYEDELVPLFEK VFVGKIPRDLYEDELV ELVPLFEKAGPIWDLR R D L E K A 0 0 0 2 0 0 3 0 0 0 3 1 0 1 1 0 0 0 1 1 0 0 13 0 1608.7923 B4DT28;O43390 B4DT28 36 48 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 2 0.0020966 100.55 By MS/MS 1 4180600 0 4180600 912 560 1026 2438 2429 2429 1 DLYRPLSSDDLDSVGDSV PGSLRKQRDLYRPLSS LDSVGDSV________ R D L S V - 0 1 0 5 0 0 0 1 0 0 3 0 0 0 1 4 0 0 1 2 0 0 18 1 1951.9011 Q5VZY9 Q5VZY9 346 363 DCLK1 yes yes 2 0.00084137 106.31 By MS/MS By matching 1 1 9187700 5356500 3831200 913 2284 1027 2439;2440 2430 2430 4595;4596 1 DMDEPSPVPNVEEVTLPK EEQEDLTKDMDEPSPV VEEVTLPKTVNTKKDS K D M P K T 0 0 1 2 0 0 3 0 0 0 1 1 1 0 4 1 1 0 0 3 0 0 18 0 1994.9507 F8VXC8;Q8TAQ2 F8VXC8 342 359 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 0.00010515 103.13 By MS/MS By MS/MS 1 1 52803000 29906000 22897000 914 1026 1028 2441;2442 2431;2432;2433 2431 371 1920 3 DMESPTKLDVTLAK KTEVALAKDMESPTKL KLDVTLAKDMQPSMES K D M A K D 1 0 0 2 0 0 1 0 0 0 2 2 1 0 1 1 2 0 0 1 0 0 14 1 1546.7913 E7EVA0;P27816;H7C456 E7EVA0 294 307 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 3.3198E-66 205.33 By MS/MS By MS/MS 4 4 1932400000 1043500000 888890000 915 828 1029;1030 2443;2444;2445;2446;2447;2448;2449;2450 2434;2435;2436;2437;2438;2439;2440 2437 311 1531;7092 7 DMLTQTYDLIERR PVDIVFERDMLTQTYD TYDLIERRGTKGISQA R D M R R G 0 2 0 2 0 1 1 0 0 1 2 0 1 0 0 0 2 0 1 0 0 0 13 1 1652.8192 Q12789 Q12789 367 379 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.029956 48.14 By MS/MS 1 0 0 0 916 2025 1031 2451 2441 2441 1 DMPGGFLFEGLSDDEDDFHPNTR SMPSSSYRDMPGGFLF DDFHPNTRSTPSSSTP R D M T R S 0 1 1 5 0 0 2 3 1 0 2 0 1 3 2 1 1 0 0 0 0 0 23 0 2610.0969 H3BUV9;Q96S82 H3BUV9 163 185 UBL7 Ubiquitin-like protein 7 yes no 3 0.0013606 64.574 By MS/MS 1 59101000 0 59101000 917 1256 1032 2452 2442 2442 452 2336 1 DMQGLSLDAASQPSK PKPRGLSRDMQGLSLD DAASQPSKGGLLERTA R D M S K G 2 0 0 2 0 2 0 1 0 0 2 1 1 0 1 3 0 0 0 0 0 0 15 0 1546.7297 E9PLL0;M0QZK6;E9PLZ8;E9PQA6;Q96EY5 E9PLL0 73 87 MVB12A Multivesicular body subunit 12A yes no 2 9.7479E-06 123.59 By MS/MS By MS/MS 2 2 60272000 31817000 28456000 918 904 1033;1034 2453;2454;2455;2456 2443;2444;2445 2444 342 1682 3 DMQPLSPISVHER TDSGSLRRDMQPLSPI SPISVHERYSSPTAGS R D M E R Y 0 1 0 1 0 1 1 0 1 1 1 0 1 0 2 2 0 0 0 1 0 0 13 0 1507.7453 P28749 P28749 635 647 RBL1 Retinoblastoma-like protein 1 yes yes 2;3 0.00034035 94.465 By MS/MS By MS/MS 2 1 15722000 10328000 5394000 919 1772 1035;1036 2457;2458;2459 2446;2447;2448 2446 672 3338 3 DMSPLSETEMALGK VKEVGLLKDMSPLSET ETEMALGKDVTPPPET K D M G K D 1 0 0 1 0 0 2 1 0 0 2 1 2 0 1 2 1 0 0 0 0 0 14 0 1507.6898 E7EVA0;P27816 E7EVA0 522 535 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.0025682 97.203 By MS/MS By MS/MS 4 5 48463000 26627000 21837000 920 828 1037;1038;1039;1040;1041 2460;2461;2462;2463;2464;2465;2466;2467;2468 2449;2450;2451;2452;2453;2454;2455;2456;2457;2458 2449 312;313 1532;1533 10 DMSPLSETEMALGKDVTPPPETEVVLIK VKEVGLLKDMSPLSET ETEVVLIKNVCLPPEM K D M I K N 1 0 0 2 0 0 4 1 0 1 3 2 2 0 4 2 3 0 0 3 0 0 28 1 3025.5239 E7EVA0;P27816 E7EVA0 522 549 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.002848 54.304 By matching By MS/MS 1 1 81071000 47181000 33891000 921 828 1042 2469;2470 2459 2459 312;313 1532;1533;7093 1 DMTSEQLDDILK VVHGSDLKDMTSEQLD EQLDDILKYHTEIVFA K D M L K Y 0 0 0 3 0 1 1 0 0 1 2 1 1 0 0 1 1 0 0 0 0 0 12 0 1406.6599 P05023 P05023 672 683 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 2 0.002232 97.597 By MS/MS 2 4222300 0 4222300 922 1637 1043;1044 2471;2472 2460;2461 2460 592 2 DNEESEQPPVPGTPTLR DFGSLLKKDNEESEQP VPGTPTLRNRTFSESS K D N L R N 0 1 1 1 0 1 3 1 0 0 1 0 0 0 4 1 2 0 0 1 0 0 17 0 1864.8803 O15439 O15439 634 650 ABCC4 Multidrug resistance-associated protein 4 yes yes 2;3 4.2664E-15 145.99 By MS/MS By MS/MS 2 2 81376000 40756000 40620000 923 1481 1045 2473;2474;2475;2476 2462;2463;2464;2465 2464 7308 4 DNIQGITKPAIR KRHRKVLRDNIQGITK GITKPAIRRLARRGGV R D N I R R 1 1 1 1 0 1 0 1 0 3 0 1 0 0 1 0 1 0 0 0 0 0 12 1 1324.7463 P62805 P62805 25 36 HIST1H4A Histone H4 yes yes 3 0.00036407 116.84 By matching By MS/MS 1 1 93700000 46684000 47016000 924 1945 1046 2477;2478 2466 2466 1 DNLAEDIMR KARVEVERDNLAEDIM NLAEDIMRLREKLQEE R D N M R L 1 1 1 2 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 9 0 1075.4968 P08670;B0YJC4 P08670 176 184 VIM Vimentin yes no 2 0.014384 83.647 By MS/MS 1 5017300 0 5017300 925 1663 1047 2479 2467 2467 1 DNLAQQSFNMEQANYTIQSLK KRMYEQQRDNLAQQSF NYTIQSLKDTKTTVDA R D N L K D 2 0 3 1 0 4 1 0 0 1 2 1 1 1 0 2 1 0 1 0 0 0 21 0 2442.1485 Q9NZZ3 Q9NZZ3 80 100 CHMP5 Charged multivesicular body protein 5 yes yes 3 1.1994E-05 123.61 By MS/MS By MS/MS 1 1 18387000 7755800 10631000 926 2963 1048 2480;2481 2468;2469 2468 1177 8483 2 DNLLDTYSADQGDSSEGGTLAR FLKQHYGRDNLLDTYS SEGGTLARGEEEEKRL R D N A R G 2 1 1 4 0 1 1 3 0 0 3 0 0 0 0 3 2 0 1 0 0 0 22 0 2284.0091 Q6ZRP7 Q6ZRP7 565 586 QSOX2 Sulfhydryl oxidase 2 yes yes 2 6.1405E-05 99.078 By MS/MS By matching 1 1 15306000 6988000 8317700 927 2352 1049 2482;2483 2470;2471 2470 4772 2 DNLTLWTSDMQGDGEEQNK TLIMQLLRDNLTLWTS GDGEEQNKEALQDVED R D N N K E 0 0 2 3 0 2 2 2 0 0 2 1 1 0 0 1 2 1 0 0 0 0 19 0 2179.9328 P62258 P62258 226 244 YWHAE 14-3-3 protein epsilon yes yes 2 2.86E-16 152.88 By MS/MS 1 19990000 0 19990000 928 1936 1050 2484 2472 2472 759 1 DNLTLWTSDMQGDGEEQNKEALQDVEDENQ TLIMQLLRDNLTLWTS QDVEDENQ________ R D N N Q - 1 0 3 5 0 4 5 2 0 0 3 1 1 0 0 1 2 1 0 1 0 0 30 1 3450.4641 P62258 P62258 226 255 YWHAE 14-3-3 protein epsilon yes yes 3 8.9468E-05 73.934 By MS/MS By matching 1 1 263210000 99749000 163460000 929 1936 1051 2485;2486 2473 2473 759 1 DNLTLWTSDQQDDDGGEGNN TLIMQLLRDNLTLWTS DDGGEGNN________ R D N N N - 0 0 3 5 0 2 1 3 0 0 2 0 0 0 0 1 2 1 0 0 0 0 20 0 2192.873 P61981 P61981 228 247 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 3.7683E-10 138.31 By MS/MS By MS/MS 1 1 43453000 18887000 24566000 930 1932 1052 2487;2488 2474;2475 2475 2 DNLTLWTSENQGDEGDAGEGEN TLIMQLLRDNLTLWTS GDAGEGEN________ R D N E N - 1 0 3 3 0 1 4 4 0 0 2 0 0 0 0 1 2 1 0 0 0 0 22 0 2349.9469 P31946 P31946 225 246 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2 0.00033266 136.81 By MS/MS By MS/MS 1 1 27673000 12617000 15056000 931 1786 1053 2489;2490 2476;2477;2478 2478 3 DNPGVVTCLDEAR AMVSMVTKDNPGVVTC VTCLDEARHGFESGDF K D N A R H 1 1 1 2 1 0 1 1 0 0 1 0 0 0 1 0 1 0 0 2 0 0 13 0 1444.6616 P22314;Q5JRR9;Q5JRS0 P22314 227 239 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 0.00026205 122.18 By MS/MS By MS/MS 1 1 20119000 6595400 13523000 932 1747 1054 2491;2492 2479;2480 2480 2 DNSEEFLKR SYTVPLERDNSEEFLK NSEEFLKREARANQLA R D N K R E 0 1 1 1 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 9 1 1136.5462 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700;F8VVY6 H0YH87 350 358 ATXN2 Ataxin-2 no no 2 0.021317 69.261 By MS/MS 1 6891800 0 6891800 933 1002 1055 2493 2481 2481 1882 1 DNSPPPAFKPEPPK AASSDQLRDNSPPPAF AFKPEPPKAKTQNKEE R D N P K A 1 0 1 1 0 0 1 0 0 0 0 2 0 1 6 1 0 0 0 0 0 0 14 1 1519.7671 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1043 1056 TJP2 Tight junction protein ZO-2 yes no 2 0.016959 74.237 By MS/MS By MS/MS 1 1 57258000 22218000 35040000 934 415 1056 2494;2495 2482;2483 2482 773 2 DNTFFRESPVGR RERSPYKRDNTFFRES FRESPVGRKDSPHSRS R D N G R K 0 2 1 1 0 0 1 1 0 0 0 0 0 2 1 1 1 0 0 1 0 0 12 1 1423.6844 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8;F8VPY7;F8VWU8 F8WF16 78 89 PPHLN1 Periphilin-1 yes no 3 0.0042747 70.808 By MS/MS 1 49515000 49515000 0 935 594 1057 2496 2484 2484 1083 1 DPAQPMSPGEATQSGAR ________________ EATQSGARPADRYGLL R D P A R P 3 1 0 1 0 2 1 2 0 0 0 0 1 0 3 2 1 0 0 0 0 0 17 0 1698.7631 Q9BQG0 Q9BQG0 5 21 MYBBP1A Myb-binding protein 1A yes yes 2;3 1.7077E-10 135.94 By MS/MS By MS/MS 2 3 69160000 37753000 31407000 936 2741 1058 2497;2498;2499;2500;2501 2485;2486;2487;2488;2489;2490 2488 1090 5685;5686 3 DPAQPMSPGEATQSGARPADR ________________ SGARPADRYGLLKHSR R D P D R Y 4 2 0 2 0 2 1 2 0 0 0 0 1 0 4 2 1 0 0 0 0 0 21 1 2137.9811 Q9BQG0 Q9BQG0 5 25 MYBBP1A Myb-binding protein 1A yes yes 3 0.0027311 66.3 By MS/MS By MS/MS 2 2 228240000 105380000 122860000 937 2741 1059;1060 2502;2503;2504;2505 2491;2492 2492 1090 5685;5686 2 DPEDSDVFEEDTHL GALMGGKRDPEDSDVF VFEEDTHL________ R D P H L - 0 0 0 4 0 0 3 0 1 0 1 0 0 1 1 1 1 0 0 1 0 0 14 0 1646.6584 Q9NZ53 Q9NZ53 592 605 PODXL2 Podocalyxin-like protein 2 yes yes 2 1.4449E-16 151.7 By MS/MS By MS/MS 1 1 9994500 5069400 4925100 938 2953 1061 2506;2507 2493;2494 2493 6226 2 DPENFPFVVLGNK FLIQASPRDPENFPFV PFVVLGNKIDLENRQV R D P N K I 0 0 2 1 0 0 1 1 0 0 1 1 0 2 2 0 0 0 0 2 0 0 13 0 1474.7456 P51149;C9J592 P51149 114 126 RAB7A Ras-related protein Rab-7a yes no 2 0.0024271 94.297 By MS/MS 1 1239200 0 1239200 939 1874 1062 2508 2495 2495 1 DPLNNSGGFESAR EQSSPPSRDPLNNSGG SGGFESARDVEALMER R D P A R D 1 1 2 1 0 0 1 2 0 0 1 0 0 1 1 2 0 0 0 0 0 0 13 0 1362.6164 P58004 P58004 244 256 SESN2 Sestrin-2 yes yes 2 0.00080825 98.582 By MS/MS 1 14916000 0 14916000 940 1922 1063 2509 2496 2496 3715 1 DPSVDITQDLVDESEEER KICQVQGKDPSVDITQ VDESEEERFDDMSSPG K D P E R F 0 1 0 4 0 1 4 0 0 1 1 0 0 0 1 2 1 0 0 2 0 0 18 0 2074.9179 Q6IN85;G3V231;H0YIY8;G3V5Z3 Q6IN85 104 121 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes no 2 4.7538E-10 138.75 By MS/MS By MS/MS 1 1 48908000 27124000 21784000 941 2303 1064 2510;2511 2497;2498;2499;2500;2501;2502 2498 4636 6 DPSVEVTQDLIDESEEER KICQVQGKDPSVEVTQ IDESEEERFEEMPETS K D P E R F 0 1 0 3 0 1 5 0 0 1 1 0 0 0 1 2 1 0 0 2 0 0 18 0 2088.9335 Q5MIZ7 Q5MIZ7 104 121 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 2 1.4329E-06 131.84 By MS/MS By MS/MS 1 1 11218000 4820200 6398300 942 2228 1065 2512;2513 2503;2504 2503 4459 2 DPWYSTVGLLPPVR DHGTGDRRDPWYSTVG VGLLPPVRAMSQRNLN R D P V R A 0 1 0 1 0 0 0 1 0 0 2 0 0 0 3 1 1 1 1 2 0 0 14 0 1598.8457 A0A0U1RQL9;A0A0U1RQN3;A0A0U1RQS5;B3KNS4;A0A0U1RQV1 A0A0U1RQL9 28 41 hCG_2043597 yes no 2 3.2526E-66 205.13 By MS/MS By MS/MS 1 1 19027000 11769000 7258600 943 384 1066 2514;2515 2505;2506 2505 8040 2 DQEAEQEAQTIHEENIAR LVTGKGLRDQEAEQEA IHEENIARLQAMAPEE R D Q A R L 3 1 1 1 0 3 5 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 18 0 2109.9563 Q9BWH6;H3BRE8 Q9BWH6 217 234 RPAP1 RNA polymerase II-associated protein 1 yes no 3 0.03196 40.962 By MS/MS 1 0 0 0 944 2766 1067 2516 2507 2507 1 DQEPKPSPEPAAVSR GGGELDKKDQEPKPSP PEPAAVSRGGGGEPGA K D Q S R G 2 1 0 1 0 1 2 0 0 0 0 1 0 0 4 2 0 0 0 1 0 0 15 1 1606.7951 Q9H7S9 Q9H7S9 246 260 ZNF703 Zinc finger protein 703 yes yes 2;3 0.0071512 73.168 By MS/MS By MS/MS 2 2 206940000 104490000 102450000 945 2851 1068 2517;2518;2519;2520 2508;2509;2510 2510 6003 3 DQIYDIFQK EMLSRGFKDQIYDIFQ QIYDIFQKLNSNTQVV K D Q Q K L 0 0 0 2 0 2 0 0 0 2 0 1 0 1 0 0 0 0 1 0 0 0 9 0 1168.5764 P60842;J3QR64;J3KTB5;J3QL43;J3QS69;J3KT12;J3KTN0;J3KSZ0 P60842 194 202 EIF4A1 Eukaryotic initiation factor 4A-I yes no 2 0.0030653 122.18 By matching By MS/MS 1 1 12356000 5979600 6376400 946 1929 1069 2521;2522 2511 2511 1 DQKLSELDDR NVDKVLERDQKLSELD KLSELDDRADALQAGA R D Q D R A 0 1 0 3 0 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 1 1217.5888 K7ENK9;K7EKX0;J3QRU4;F8WCA0;L7N2F9;Q15836;P63027;F5GZV7;P23763 K7ENK9 12 21 VAMP2;VAMP3;VAMP1 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2;Vesicle-associated membrane protein 1 yes no 2 0.02054 73.841 By matching By MS/MS 1 1 12668000 7240200 5428000 947 1051 1070 2523;2524 2512 2512 1991 1 DQMEGSPNSSESFEHIAR PPKPLMRRDQMEGSPN ESFEHIARSARDHAIS R D Q A R S 1 1 1 1 0 1 3 1 1 1 0 0 1 1 1 4 0 0 0 0 0 0 18 0 2019.8592 E7EPN9;Q9Y520 E7EPN9 776 793 PRRC2C Protein PRRC2C yes no 2;3 0.00024996 92.427 By MS/MS By MS/MS 2 2 34453000 19232000 15222000 948 802 1071 2525;2526;2527;2528 2513;2514;2515;2516 2516 297 1431 4 DQMQQQLNDYEQLLDVK EREMAEIRDQMQQQLN YEQLLDVKLALDMEIS R D Q V K L 0 0 1 3 0 5 1 0 0 0 3 1 1 0 0 0 0 0 1 1 0 0 17 0 2106.9892 P20700;E9PBF6 P20700 351 367 LMNB1 Lamin-B1 yes no 2 2.1589E-31 167.03 By matching By MS/MS 1 1 21301000 8439100 12862000 949 1739 1072 2529;2530 2517 2517 651 1 DQMSTSSVQALAERK RQVVRDMKDQMSTSSV VQALAERKNRQALLGD K D Q R K N 2 1 0 1 0 2 1 0 0 0 1 1 1 0 0 3 1 0 0 1 0 0 15 1 1649.8043 O43752 O43752 104 118 STX6 Syntaxin-6 yes yes 2 0.014429 49.066 By MS/MS 1 5931400 0 5931400 950 1507 1073 2531 2518 2518 2832;2833;7318 0 DQNESLDEEMFYK IFLSTRAKDQNESLDE LDEEMFYKLTSGWV__ K D Q Y K L 0 0 1 2 0 1 3 0 0 0 1 1 1 1 0 1 0 0 1 0 0 0 13 0 1646.677 A0A0U1RRM8;H0YJ34;Q96AC1 A0A0U1RRM8 527 539 FERMT2 Fermitin family homolog 2 yes no 2 0.0015941 80.24 By MS/MS 1 1621500 1621500 0 951 401 1074 2532 2519 2519 157 742 1 DQPAFTPSGILTPHALGSR EKRKRMKRDQPAFTPS TPHALGSRNSPGSQVA R D Q S R N 2 1 0 1 0 1 0 2 1 1 2 0 0 1 3 2 2 0 0 0 0 0 19 0 1964.0116 Q9H0D6 Q9H0D6 428 446 XRN2 5-3 exoribonuclease 2 yes yes 3 4.2199E-05 97.825 By MS/MS By matching 1 1 9964700 4981200 4983500 952 2801 1075 2533;2534 2520 2520 7843 1 DQPAFTPSGILTPHALGSRNSPGSQVASNPR EKRKRMKRDQPAFTPS SQVASNPRQAAYEMRM R D Q P R Q 3 2 2 1 0 2 0 3 1 1 2 0 0 1 5 5 2 0 0 1 0 0 31 1 3158.5857 Q9H0D6 Q9H0D6 428 458 XRN2 5-3 exoribonuclease 2 yes yes 4 0.0091213 44.11 By matching By MS/MS 1 1 30842000 11642000 19200000 953 2801 1076 2535;2536 2521 2521 5852;7843 1 DQPPFGDSDDSVEADKSSPGIHLER LVRAHSEKDQPPFGDS SPGIHLERSQASTTVD K D Q E R S 1 1 0 5 0 1 2 2 1 1 1 1 0 1 3 4 0 0 0 1 0 0 25 1 2697.2154 Q14676 Q14676 488 512 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.030325 46.839 By MS/MS 1 0 0 0 954 2098 1077 2537 2522 2522 1 DQQEAALVDMVNDGVEDLR RTLGLYGKDQQEAALV NDGVEDLRCKYISLIY K D Q L R C 2 1 1 4 0 2 2 1 0 0 2 0 1 0 0 0 0 0 0 3 0 0 19 0 2115.9743 A8MX94;P09211 A8MX94 83 101 GSTP1 Glutathione S-transferase P yes no 2;3 4.9337E-06 128.71 By MS/MS By MS/MS 2 2 25564000 11095000 14469000 955 501 1078 2538;2539;2540;2541 2523;2524;2525 2523 198 2 DQQNLPYGVTPASPSGHSQGR AGQLRQVRDQQNLPYG PSGHSQGRRGASGSIF R D Q G R R 1 1 1 1 0 3 0 3 1 0 1 0 0 0 3 3 1 0 1 1 0 0 21 0 2195.0356 E7ETY4;E9PC69;Q7KZI7 E7ETY4 527 547 MARK2 Serine/threonine-protein kinase MARK2 yes no 3 6.2912E-05 92.147 By MS/MS By MS/MS 1 1 31610000 19439000 12171000 956 823 1079 2542;2543 2526;2527;2528 2528 1513;1514 3 DQQPSGSEGEDDDAEAALKK GPEKFTDKDQQPSGSE DAEAALKKEVGDIKAS K D Q K K E 3 0 0 4 0 2 3 2 0 0 1 2 0 0 1 2 0 0 0 0 0 0 20 1 2088.9084 H3BNW0;Q9NXG2 H3BNW0 82 101 THUMPD1 THUMP domain-containing protein 1 yes no 2 0.0082635 70.987 By matching By MS/MS 1 1 11479000 4509000 6970300 957 1237 1080 2544;2545 2529 2529 2311;2312 1 DQSFKTV RTAPRGVKDQSFKTV_ KDQSFKTV________ K D Q T V - 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 1 1 0 0 1 0 0 7 1 823.40758 F8VRI5 F8VRI5 37 43 ERBB3 yes yes 1 0.021491 48.423 By MS/MS 1 168410000 0 168410000 958 1005 1081 2546 2530 2530 1 DQSPPPSPPPSYHPPPPPTK QESPVISKDQSPPPSP HPPPPPTKKPEVVVEA K D Q T K K 0 0 0 1 0 1 0 0 1 0 0 1 0 0 11 3 1 0 1 0 0 0 20 0 2119.0375 Q9P206 Q9P206 667 686 KIAA1522 Uncharacterized protein KIAA1522 yes yes 3 0.030007 64.331 By MS/MS By MS/MS 1 2 37875000 14919000 22956000 959 2969 1082 2547;2548;2549 2531;2532;2533 2533 2 DQTASAPATPLVNK FQRSKKKRDQTASAPA PATPLVNKHRPTFTRS R D Q N K H 3 0 1 1 0 1 0 0 0 0 1 1 0 0 2 1 2 0 0 1 0 0 14 0 1411.7307 A0A0X1KG75;A0A0D9SG04;Q53SF7;A0A0B4J1Z0 A0A0X1KG75 292 305 COBLL1 Cordon-bleu protein-like 1 yes no 2 0.00026378 116.79 By MS/MS By matching 1 1 8315400 4537800 3777600 960 345 1083 2550;2551 2534 2534 613 1 DQVANSAFVER YYITGETKDQVANSAF ANSAFVERLRKHGLEV K D Q E R L 2 1 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1234.5942 P07900 P07900 500 510 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.0021948 106.62 By MS/MS By MS/MS 1 1 36417000 16313000 20104000 961 1656 1084 2552;2553 2535;2536 2536 2 DQYSRELLVSSIFAAASR KGSWGSGKDQYSRELL SIFAAASRKRKKPKEK K D Q S R K 3 2 0 1 0 1 1 0 0 1 2 0 0 1 0 4 0 0 1 1 0 0 18 1 2012.0327 Q5T5U3;A0A087WW76 Q5T5U3 1401 1418 ARHGAP21 Rho GTPase-activating protein 21 yes no 2 0.031654 41.383 By MS/MS 1 0 0 0 962 2241 1085 2554 2537 2537 1 DRAPQTLPSPEADALAGSK YGSPGELRDRAPQTLP ADALAGSKHKEEKADL R D R S K H 4 1 0 2 0 1 1 1 0 0 2 1 0 0 3 2 1 0 0 0 0 0 19 1 1922.9698 P31274 P31274 151 169 HOXC9 Homeobox protein Hox-C9 yes yes 3 0.020243 55.718 By MS/MS 1 13138000 13138000 0 963 1781 1086 2555 2538 2538 3366 0 DRICSDEEEDEEKGGR EEKDKEQRDRICSDEE EDEEKGGRRIMGPRKK R D R G R R 0 2 0 3 1 0 5 2 0 1 0 1 0 0 0 1 0 0 0 0 0 0 16 2 1922.7912 Q9NPG3 Q9NPG3 489 504 UBN1 Ubinuclein-1 yes yes 3 0.004258 78.057 By matching By MS/MS 1 1 9781500 3712400 6069000 964 2888 1087 2556;2557 2539 2539 6079 1 DRLGSYSGPTSVSR ASAEGTRRDRLGSYSG SGPTSVSRQRVESLRK R D R S R Q 0 2 0 1 0 0 0 2 0 0 1 0 0 0 1 4 1 0 1 1 0 0 14 1 1480.727 V9GYZ0;Q9BZ23 V9GYZ0 62 75 PANK2 Pantothenate kinase 2, mitochondrial yes no 2;3 0.00098606 85.176 By MS/MS By MS/MS 2 2 48027000 16915000 31112000 965 2780 1088 2558;2559;2560;2561 2540;2541 2541 5784 2 DRMIHRSTSQGSINSPVYSR AEGYQDVRDRMIHRST INSPVYSRHSYTPTTS R D R S R H 0 3 1 1 0 1 0 1 1 2 0 0 1 0 1 5 1 0 1 1 0 0 20 2 2290.1237 J3QSX6;F8W8M4;A0A0A0MRL6;O14639;H0Y7N6;F6XFR5 J3QSX6 102 121 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.032227 41.227 By MS/MS 1 0 0 0 966 220 1089 2562 2542 2542 93 385 1 DRQAAEANKNASILLEELDLEK MESIVQAKDRQAAEAN LEELDLEKLREESRRL K D R E K L 4 1 2 2 0 1 4 0 0 1 4 2 0 0 0 1 0 0 0 0 0 0 22 2 2469.2711 H0YM23;O75179;H0YLQ3 H0YM23 1330 1351 ANKRD17 Ankyrin repeat domain-containing protein 17 yes no 3 0.026167 53.625 By MS/MS 1 0 0 0 967 1215 1090 2563 2543 2543 2265 1 DRSSPPPGYIPDELHQVAR SIIGPTSRDRSSPPPG DELHQVARNGSFTSIN R D R A R N 1 2 0 2 0 1 1 1 1 1 1 0 0 0 4 2 0 0 1 1 0 0 19 1 2133.0603 Q9Y2U5 Q9Y2U5 161 179 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 yes yes 3 0.00269 66.702 By MS/MS By MS/MS 1 1 35455000 16713000 18742000 968 3094 1091 2564;2565 2544;2545 2545 6641;6642 2 DRTPPHLLYSDR NLDADLVRDRTPPHLL PHLLYSDRDRTFLEGD R D R D R D 0 2 0 2 0 0 0 0 1 0 2 0 0 0 2 1 1 0 1 0 0 0 12 1 1468.7423 Q8NDT2 Q8NDT2 530 541 RBM15B Putative RNA-binding protein 15B yes yes 3 0.0010236 87.641 By MS/MS By MS/MS 1 1 40266000 16896000 23370000 969 2510 1092 2566;2567 2546;2547 2546 7735 2 DRTPPLLYR PDPLRGARDRTPPLLY RTPPLLYRDRDRDLYP R D R Y R D 0 2 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 1 0 0 0 9 1 1129.6244 A0A087WWP4;Q96T37 A0A087WWP4 522 530 RBM15 Putative RNA-binding protein 15 yes no 2;3 0.0023583 86.772 By MS/MS By MS/MS 2 2 249750000 137030000 112720000 970 94 1093 2568;2569;2570;2571 2548;2549;2550;2551;2552 2548 6855 4 DSAAPSPIPGADNLSADPVVSPPTSIPFK DGHSVSSRDSAAPSPI PPTSIPFKSGEPALRT R D S F K S 4 0 1 3 0 0 0 1 0 2 1 1 0 1 7 5 1 0 0 2 0 0 29 0 2846.4338 A0A0A0MT60;Q5T1M5;X6RKW4 A0A0A0MT60 331 359 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 3 0.003333 51.858 By MS/MS By MS/MS 1 1 32621000 21407000 11214000 971 266 1094 2572;2573 2553;2554 2554 463;464 2 DSAIPVESDTDDEGAPR RKNVNIYRDSAIPVES TDDEGAPRISLAEMLE R D S P R I 2 1 0 4 0 0 2 1 0 1 0 0 0 0 2 2 1 0 0 1 0 0 17 0 1772.7701 C9JA08;Q96D46 C9JA08 461 477 NMD3 60S ribosomal export protein NMD3 yes no 2 7.477E-42 178.02 By MS/MS By MS/MS 2 2 133920000 64876000 69041000 972 649 1095;1096 2574;2575;2576;2577 2555;2556;2557;2558;2559;2560 2558 1207;7024 6 DSALAEAPEGLSPAPPAR GMIAEGPRDSALAEAP LSPAPPARSEEPCEQP R D S A R S 5 1 0 1 0 0 2 1 0 0 2 0 0 0 4 2 0 0 0 0 0 0 18 0 1747.8741 C9JPC9;Q9H9J4 C9JPC9 691 708 USP42 Ubiquitin carboxyl-terminal hydrolase 42 yes no 2;3 0.00017857 120.84 By MS/MS By MS/MS 2 2 102190000 57955000 44233000 973 683 1097 2578;2579;2580;2581 2561;2562;2563;2564 2561 1260 4 DSALQDTDDSDDDPVLIPGAR AHEETSTRDSALQDTD PVLIPGARYRAGPGDR R D S A R Y 2 1 0 7 0 1 0 1 0 1 2 0 0 0 2 2 1 0 0 1 0 0 21 0 2213.9924 Q58WW2 Q58WW2 648 668 DCAF6 DDB1- and CUL4-associated factor 6 yes yes 2;3 0.002345 75.764 By MS/MS By MS/MS 1 2 25181000 12466000 12715000 974 2210 1098 2582;2583;2584 2565;2566;2567 2567 4421;7632 3 DSAPSEHHTLNEKSGQLIANSIWDSVMRDK PASDEHTKDSAPSEHH WDSVMRDKDMSSFMLP K D S D K D 2 1 2 3 0 1 2 1 2 2 2 2 1 0 1 5 1 1 0 1 0 0 30 2 3364.6106 H7BZH9;E9PDC2;A0A088AWP5;Q8WUY3 H7BZH9 520 549 PRUNE2 Protein prune homolog 2 yes no 3 0.026818 44.596 By matching By MS/MS 1 1 14942000 10099000 4842600 975 178 1099 2585;2586 2568 2568 296;297 0 DSAVKELQQKTENYEQR FRQACMDRDSAVKELQ KTENYEQRIREQQEQL R D S Q R I 1 1 1 1 0 3 3 0 0 0 1 2 0 0 0 1 1 0 1 1 0 0 17 2 2065.0076 E7EQA9;Q92844;E7EWR8;E7EM55;E7ERM9;E7EMT6;E7EVA2 E7EQA9 24 40 TANK TRAF family member-associated NF-kappa-B activator yes no 3 0.012079 59.513 By MS/MS 1 5309200 5309200 0 976 805 1100 2587 2569 2569 7077;8121 0 DSAYQSITHYRPVSASR RERPMYGRDSAYQSIT YRPVSASRSSLDLSYY R D S S R S 2 2 0 1 0 1 0 0 1 1 0 0 0 0 1 4 1 0 2 1 0 0 17 1 1936.9391 P50402;Q5HY57 P50402 158 174 EMD Emerin yes no 3 0.00050686 95.264 By MS/MS By MS/MS 4 2 508500000 298770000 209730000 977 1867 1101;1102 2588;2589;2590;2591;2592;2593 2570;2571;2572;2573;2574 2572 3624;7480;8286;8287 5 DSDGVDGFEAEGK HNNRKRRRDSDGVDGF DGFEAEGKKDKKDYDN R D S G K K 1 0 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 13 0 1324.5419 Q96KR1 Q96KR1 1053 1065 ZFR Zinc finger RNA-binding protein yes yes 2 0.021529 64.534 By MS/MS By matching 1 1 9990300 5740300 4250100 978 2679 1103 2594;2595 2575 2575 5536 1 DSDKPETPPVVNVPVPVLIGPISGMSR LQIVSPVRDSDKPETP GPISGMSRPFVRTDSI R D S S R P 0 1 1 2 0 0 1 2 0 2 1 1 1 0 6 3 1 0 0 5 0 0 27 1 2799.4841 Q7Z3U7 Q7Z3U7 1181 1207 MON2 Protein MON2 homolog yes yes 3 4.2967E-07 90.742 By matching By MS/MS 1 1 32584000 20064000 12520000 979 2379 1104 2596;2597 2576 2576 959 4831 1 DSDQVAQSDGEESPAAEEQLLGEHIKEEK DGANVALKDSDQVAQS GEHIKEEKEESEFLPS K D S E K E 3 0 0 3 0 3 7 2 1 1 2 2 0 0 1 3 0 0 0 1 0 0 29 1 3167.4378 D6REX3;O94979;D6RHZ5;H0Y8V7 D6REX3 520 548 SEC31A Protein transport protein Sec31A yes no 3 4.2087E-05 75.191 By MS/MS By MS/MS 2 2 52574000 26321000 26253000 980 761 1105;1106 2598;2599;2600;2601 2577;2578;2579;2580 2578 1371 4 DSDYVYPSLESDEDNPIFK DHLDACFKDSDYVYPS DEDNPIFKSRSKKRKG K D S F K S 0 0 1 4 0 0 2 0 0 1 1 1 0 1 2 3 0 0 2 1 0 0 19 0 2231.9746 O75151;E7ET14;A0A087WW48 O75151 872 890 PHF2 Lysine-specific demethylase PHF2 yes no 2;3 2.7306E-103 218.36 By matching By MS/MS 2 2 121590000 70977000 50612000 981 1537 1107 2602;2603;2604;2605 2581;2582 2581 2902 2 DSELKTPPSVGPPSVTVVTLESAPSALEK PESAPENKDSELKTPP SAPSALEKTTGDKTVE K D S E K T 2 0 0 1 0 0 3 1 0 0 3 2 0 0 5 5 3 0 0 4 0 0 29 1 2934.5437 Q96T58 Q96T58 1628 1656 SPEN Msx2-interacting protein yes yes 3 0.028024 50.802 By matching By MS/MS 1 1 52950000 32058000 20891000 982 2716 1108 2606;2607 2583 2583 5626 0 DSENLASPSEYPENGER NLFSPVNRDSENLASP EYPENGERFSFLSKPV R D S E R F 1 1 2 1 0 0 4 1 0 0 1 0 0 0 2 3 0 0 1 0 0 0 17 0 1892.8024 P52948 P52948 617 633 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 2 5.892E-124 236.75 By MS/MS By MS/MS 3 3 557280000 306930000 250350000 983 1893 1109;1110 2608;2609;2610;2611;2612;2613 2584;2585;2586;2587;2588;2589;2590;2591;2592 2586 93 3664 9 DSFIENSSSNCTSGSSKPNSPSISPSILSNTEHK DKIEPSAKDSFIENSS ILSNTEHKRGPEVTSQ K D S H K R 0 0 4 1 1 0 2 1 1 3 1 2 0 1 3 12 2 0 0 0 0 0 34 1 3594.638 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700;F8W0B5 H0YH87 763 796 ATXN2 Ataxin-2 no no 3 0.00017295 60.288 By MS/MS By MS/MS 1 2 30434000 13231000 17203000 984 1002;1029 1111 2614;2615;2616 2593;2594 2593 1883;1884;1885;1886;1887;7150 2 DSFSHSPGAVSSLK LSRSDVFRDSFSHSPG PGAVSSLKVFTGLAAP R D S L K V 1 0 0 1 0 0 0 1 1 0 1 1 0 1 1 5 0 0 0 1 0 0 14 0 1417.6838 Q9H6R7 Q9H6R7 685 698 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes yes 2 8.6754E-07 127.03 By MS/MS By MS/MS 1 1 55586000 25768000 29818000 985 2842 1112 2617;2618 2595;2596 2596 5980 2 DSGGKTPGDFSYAYQKPEETTR LSTPGLEKDSGGKTPG QKPEETTRSPDEEDYD K D S T R S 1 1 0 2 0 1 2 3 0 0 0 2 0 1 2 2 3 0 2 0 0 0 22 2 2433.1084 P46821 P46821 1859 1880 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.010863 54.058 By MS/MS By MS/MS 1 1 16429000 8693700 7735800 986 1840 1113 2619;2620 2597;2598;2599 2598 3491;8267;8268 3 DSGIITPEKELK SEGKNSNKDSGIITPE ITPEKELKVSVAGGTQ K D S L K V 0 0 0 1 0 0 2 1 0 2 1 2 0 0 1 1 1 0 0 0 0 0 12 1 1328.7187 E7EVZ1 E7EVZ1 1143 1154 ZFHX4 yes yes 2 0.017349 99.834 By MS/MS By MS/MS 1 1 24796000 11920000 12876000 987 831 1114 2621;2622 2600;2601 2601 2 DSGPLPTPPGVSLLGEPPK SGLRGLQKDSGPLPTP SLLGEPPKDYRIPLNP K D S P K D 0 0 0 1 0 0 1 3 0 0 3 1 0 0 6 2 1 0 0 1 0 0 19 0 1856.9884 A0A087WZ13;E9PAU2 A0A087WZ13 482 500 RAVER1 yes no 2 0.0037565 72.932 By matching By MS/MS 1 1 18143000 12375000 5768000 988 134 1115 2623;2624 2602 2602 221;6860 1 DSGPLPTPPGVSLLGEPPKDYR SGLRGLQKDSGPLPTP GEPPKDYRIPLNPYLN K D S Y R I 0 1 0 2 0 0 1 3 0 0 3 1 0 0 6 2 1 0 1 1 0 0 22 1 2291.1798 A0A087WZ13;E9PAU2 A0A087WZ13 482 503 RAVER1 yes no 3 0.00018047 85.855 By MS/MS By MS/MS 1 2 87677000 49509000 38168000 989 134 1116 2625;2626;2627 2603;2604;2605;2606 2604 221;6860 3 DSGRGDSVSDSGSDALR RLRKNSSRDSGRGDSV DSGSDALRSGLTVPTS R D S L R S 1 2 0 4 0 0 0 3 0 0 1 0 0 0 0 5 0 0 0 1 0 0 17 1 1679.7347 Q53EL6;Q5VZS7 Q53EL6 70 86 PDCD4 Programmed cell death protein 4 yes no 3 0.00082536 80.109 By MS/MS By matching 1 1 8261200 4729500 3531700 990 2199 1117 2628;2629 2607 2607 4398 1 DSGSDTASAIIPSTTPSVDSDDESVVK DKIKGKNKDSGSDTAS SDDESVVKDKKKKSKI K D S V K D 2 0 0 5 0 0 1 1 0 2 0 1 0 0 2 7 3 0 0 3 0 0 27 0 2679.2247 Q6WKZ4;E7EX40 Q6WKZ4 183 209 RAB11FIP1 Rab11 family-interacting protein 1 yes no 2;3 1.1428E-14 136.01 By MS/MS By MS/MS 2 2 94770000 38190000 56580000 991 2346 1118 2630;2631;2632;2633 2608;2609;2610;2611;2612;2613 2610 4753;4754;4755 6 DSGSDTASAIIPSTTPSVDSDDESVVKDK DKIKGKNKDSGSDTAS DESVVKDKKKKSKIKT K D S D K K 2 0 0 6 0 0 1 1 0 2 0 2 0 0 2 7 3 0 0 3 0 0 29 1 2922.3466 Q6WKZ4;E7EX40 Q6WKZ4 183 211 RAB11FIP1 Rab11 family-interacting protein 1 yes no 3 5.1133E-10 92.716 By MS/MS By MS/MS 1 1 31050000 13078000 17973000 992 2346 1119 2634;2635 2614;2615 2614 4753;4754;4755 2 DSGSISLQETR SSFLSKTKDSGSISLQ SISLQETRRQKKTLKK K D S T R R 0 1 0 1 0 1 1 1 0 1 1 0 0 0 0 3 1 0 0 0 0 0 11 0 1191.5731 Q9H2G2 Q9H2G2 776 786 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.016978 67.519 By MS/MS By MS/MS 1 1 6865200 3336000 3529200 993 2818 1120 2636;2637 2616;2617 2617 5900 2 DSGSQEVLSELR PAGSQETKDSGSQEVL QEVLSELRVLSQKLKE K D S L R V 0 1 0 1 0 1 2 1 0 0 2 0 0 0 0 3 0 0 0 1 0 0 12 0 1318.6365 Q9BVJ6;X6RJY0 Q9BVJ6 450 461 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 0.00047171 111.64 By MS/MS By MS/MS 1 1 17839000 9114400 8724300 994 2757 1121 2638;2639 2618;2619 2619 5732 2 DSHSSEEDEASSQTDLSQTISKK VMTRRGLRDSHSSEED LSQTISKKTVRSIQEA R D S K K T 1 0 0 3 0 2 3 0 1 1 1 2 0 0 0 7 2 0 0 0 0 0 23 1 2508.11 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 32 54 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.0010603 72.564 By MS/MS 1 18817000 18817000 0 995 251 1122 2640 2620 2620 434;435 1 DSIQQSFSK LHLTRQEKDSIQQSFS SIQQSFSKEAKAQALQ K D S S K E 0 0 0 1 0 2 0 0 0 1 0 1 0 1 0 3 0 0 0 0 0 0 9 0 1038.4982 A0A0G2JQM2;A0A0G2JR50;Q86SQ7 A0A0G2JQM2 355 363 SDCCAG8 Serologically defined colon cancer antigen 8 yes no 1 0.0028287 74.255 By MS/MS 1 6328100 0 6328100 996 365 1123 2641 2621 2621 672 1 DSISSDSETSEPLSCR SLGSGSSRDSISSDSE TSEPLSCRAQGQTGVL R D S C R A 0 1 0 2 1 0 2 0 0 1 1 0 0 0 1 6 1 0 0 0 0 0 16 0 1768.7421 O75164 O75164 519 534 KDM4A Lysine-specific demethylase 4A yes yes 2 0.00035402 100.41 By MS/MS By MS/MS 1 1 25778000 14471000 11307000 997 1539 1124 2642;2643 2622;2623 2623 2908 2 DSITPDIATKPGQPLFLDSISPK EVHRGLRRDSITPDIA FLDSISPKKSFKTRKQ R D S P K K 1 0 0 3 0 1 0 1 0 3 2 2 0 1 4 3 2 0 0 0 0 0 23 1 2439.2897 Q2TB10 Q2TB10 316 338 ZNF800 Zinc finger protein 800 yes yes 3 4.3265E-05 88.765 By MS/MS By MS/MS 1 1 57539000 26800000 30738000 998 2183 1125 2644;2645 2624;2625 2625 4340;4341 2 DSKCIIQMSGSTTTIVNPKQPK FNSREMSRDSKCIIQM IVNPKQPKETPKSFSF R D S P K E 0 0 1 1 1 2 0 1 0 3 0 3 1 0 2 3 3 0 0 1 0 0 22 2 2432.2403 Q12756;F8W8V9 Q12756 23 44 KIF1A Kinesin-like protein KIF1A;Kinesin-like protein yes no 3 0.018085 60.134 By MS/MS 1 0 0 0 999 2024 1126 2646 2626 2626 801 3927 1 DSKPIALKEEIVTPK DLKAQGTRDSKPIALK KEEIVTPKETETSEKE R D S P K E 1 0 0 1 0 0 2 0 0 2 1 3 0 0 2 1 1 0 0 1 0 0 15 2 1666.9505 J3QSD7;Q9NYV4 J3QSD7 501 515 CDK12 Cyclin-dependent kinase 12 yes no 3 0.0070588 75.319 By MS/MS By matching 1 1 9793900 4990000 4803900 1000 1361 1127 2647;2648 2627 2627 7257 1 DSLLQDGEFSMDLR GQKCSVIRDSLLQDGE GEFSMDLRTKSTGGAP R D S L R T 0 1 0 3 0 1 1 1 0 0 3 0 1 1 0 2 0 0 0 0 0 0 14 0 1624.7403 P07737;K7EJ44 P07737 76 89 PFN1 Profilin-1 yes no 2 0.0035098 108.56 By MS/MS By MS/MS 1 1 81080000 36574000 44506000 1001 1654 1128 2649;2650 2628;2629 2628 609 2 DSLSPVLHPSDLILTR ALDAGTAKDSLSPVLH PSDLILTRGTLDEEDE K D S T R G 0 1 0 2 0 0 0 0 1 1 4 0 0 0 2 3 1 0 0 1 0 0 16 0 1761.9625 Q9HCN4 Q9HCN4 311 326 GPN1 GPN-loop GTPase 1 yes yes 2;3 1.063E-51 182.7 By MS/MS By MS/MS 2 2 136380000 72686000 63695000 1002 2880 1129 2651;2652;2653;2654 2630;2631;2632;2633 2632 6067 4 DSLYASGANLR PLSSPPGRDSLYASGA YASGANLRDSPSYPDS R D S L R D 2 1 1 1 0 0 0 1 0 0 2 0 0 0 0 2 0 0 1 0 0 0 11 0 1165.5728 O94910 O94910 1382 1392 LPHN1 Latrophilin-1 yes yes 2 0.0036931 92.051 By MS/MS By MS/MS 1 1 9798900 5630500 4168400 1003 1575 1130 2655;2656 2634;2635 2634 8208 2 DSMQGGAGK LEAEEVMRDSMQGGAG SMQGGAGKSPAAIREG R D S G K S 1 0 0 1 0 1 0 3 0 0 0 1 1 0 0 1 0 0 0 0 0 0 9 0 849.36507 O94993 O94993 194 202 SOX30 Transcription factor SOX-30 yes yes 1 0.024022 48.756 By MS/MS 1 1113200 1113200 0 1004 1579 1131 2657 2636 2636 571 0 DSMSAAEVGTGQYATTK ENHEIYMKDSMSAAEV TGQYATTKGISQTNLI K D S T K G 3 0 0 1 0 1 1 2 0 0 0 1 1 0 0 2 3 0 1 1 0 0 17 0 1715.7672 A8K968;A0A0A0MRA8;A0A0A0MSA4;A0A0J9YW26;A0A1B0GTF8;J3KT37 A8K968 350 366 EPB41L3 yes no 2 0.0061403 79.886 By matching By MS/MS 1 1 15179000 6549800 8629400 1005 205 1132 2658;2659 2637 2637 6883 1 DSNAPKSPLTGYVR RKRKKPLRDSNAPKSP SPLTGYVRFMNERREQ R D S V R F 1 1 1 1 0 0 0 1 0 0 1 1 0 0 2 2 1 0 1 1 0 0 14 1 1503.7682 H0YNS8;H0YKM5;Q9NP66 H0YNS8 99 112 HMG20A High mobility group protein 20A yes no 2 0.016812 74.338 By matching By MS/MS 1 1 54770000 31774000 22996000 1006 1204 1133 2660;2661 2638 2638 2247 1 DSPAFPDSPWR AQVSPGPRDSPAFPDS AFPDSPWRERVLAPIL R D S W R E 1 1 0 2 0 0 0 0 0 0 0 0 0 1 3 2 0 1 0 0 0 0 11 0 1273.5728 Q9NQS7 Q9NQS7 268 278 INCENP Inner centromere protein yes yes 2 0.00098937 106.88 By matching By MS/MS 1 1 9265500 5574100 3691400 1007 2898 1134 2662;2663 2639;2640 2640 6099;6100 2 DSPAFPDSPWRER AQVSPGPRDSPAFPDS PDSPWRERVLAPILPD R D S E R V 1 2 0 2 0 0 1 0 0 0 0 0 0 1 3 2 0 1 0 0 0 0 13 1 1558.7165 Q9NQS7 Q9NQS7 268 280 INCENP Inner centromere protein yes yes 3 0.029499 47.545 By MS/MS 1 3146700 3146700 0 1008 2898 1135 2664 2641 2641 6099;6100 1 DSPSVWAAVPGK DAAIVGYKDSPSVWAA VWAAVPGKTFVNITPA K D S G K T 2 0 0 1 0 0 0 1 0 0 0 1 0 0 2 2 0 1 0 2 0 0 12 0 1212.6139 P07737;I3L3D5;CON__P02584 P07737 27 38 PFN1 Profilin-1 yes no 2 0.0032853 91.265 By MS/MS By MS/MS 1 1 9842200 5173000 4669200 1009 1654 1136 2665;2666 2642;2643;2644 2644 3 DSQDASAEQSDHDDEVASLASASGGFGTK PYHLLQQRDSQDASAE ASGGFGTKVPAPRLPA R D S T K V 5 0 0 5 0 2 2 3 1 0 1 1 0 1 0 6 1 0 0 1 0 0 29 0 2881.2122 Q6P2E9 Q6P2E9 870 898 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 3 4.0768E-10 90.964 By MS/MS By MS/MS 1 2 97490000 46783000 50706000 1010 2317 1137 2667;2668;2669 2645;2646;2647 2647 4674;4675 3 DSQSRQGGYSMHQLQGNK LDQKESRRDSQSRQGG MHQLQGNKEYGSEKKG R D S N K E 0 1 1 1 0 4 0 3 1 0 1 1 1 0 0 3 0 0 1 0 0 0 18 1 2019.9181 H0YBF7 H0YBF7 125 142 ASAP1 yes yes 2 0.032039 44.831 By MS/MS 1 0 0 0 1011 1162 1138 2670 2648 2648 420 1 DSSDSADGRATPSENLVPSSAR IPPRAHSRDSSDSADG NLVPSSARVDKPPSVL R D S A R V 3 2 1 3 0 0 1 1 0 0 1 0 0 0 2 6 1 0 0 1 0 0 22 1 2218.0098 F5H6M0;F5H047;F5H669;Q8N684 F5H6M0 184 205 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 3 0.0055132 59.339 By MS/MS By MS/MS 1 1 35001000 14616000 20385000 1012 956 1139 2671;2672 2649;2650 2650 1797;7128 2 DSSFTEVPRSPK STFSFSGRDSSFTEVP TEVPRSPKHAHSSSLQ R D S P K H 0 1 0 1 0 0 1 0 0 0 0 1 0 1 2 3 1 0 0 1 0 0 12 1 1348.6623 O95425 O95425 236 247 SVIL Supervillin yes yes 2;3 4.399E-09 137.93 By MS/MS By MS/MS 1 2 29491000 13235000 16257000 1013 1596 1140 2673;2674;2675 2651;2652;2653 2651 3024 3 DSSGQEDETQSSNDDPSQSVASQDAQEIIRPR ENKEENIKDSSGQEDE AQEIIRPRRCKYFDTN K D S P R R 2 2 1 5 0 5 3 1 0 2 0 0 0 0 2 7 1 0 0 1 0 0 32 1 3475.5207 Q8N108 Q8N108 120 151 MIER1 Mesoderm induction early response protein 1 yes yes 3 4.6945E-11 107.83 By MS/MS By MS/MS 1 2 54903000 20532000 34371000 1014 2455 1141;1142 2676;2677;2678 2654;2655;2656;2657 2656 5012;5013 4 DSSGSFSPCQPFLEK VPAEGSSKDSSGSFSP PCQPFLEKYQTIHSTG K D S E K Y 0 0 0 1 1 1 1 1 0 0 1 1 0 2 2 4 0 0 0 0 0 0 15 0 1684.7403 H3BMJ2;Q6ZRI6 H3BMJ2 71 85 C15orf39 Uncharacterized protein C15orf39 yes no 2 0.00062421 101.56 By matching By MS/MS 1 1 11669000 5855100 5813700 1015 1229 1143 2679;2680 2658 2658 2291 1 DSSPGSSSTSLLIK GHRSPLEKDSSPGSSS SSTSLLIKKQRETSDT K D S I K K 0 0 0 1 0 0 0 1 0 1 2 1 0 0 1 6 1 0 0 0 0 0 14 0 1377.6987 U3KQJ0;H0YG46;J3KNE4;A0A0A0MTP3;Q99550 U3KQJ0 63 76 MPHOSPH9 M-phase phosphoprotein 9 yes no 2 0.025781 61.409 By matching By MS/MS 1 1 12071000 5092900 6978100 1016 276 1144 2681;2682 2659 2659 483;484 1 DSSQEYTDSTGIDLHEFLVNTLK LPRKMLSRDSSQEYTD EFLVNTLKNNPRDRMM R D S L K N 0 0 1 3 0 1 2 1 1 1 3 1 0 1 0 3 3 0 1 1 0 0 23 0 2611.229 Q15032;H7C2F9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H0YIX9 Q15032 140 162 R3HDM1;R3HDM2 R3H domain-containing protein 1;R3H domain-containing protein 2 no no 3 0.00099177 66.76 By MS/MS 1 3589100 0 3589100 1017 2120;395 1145 2683 2660 2660 724 1 DSSSQENMVEDCLYETVK EGPYEVLKDSSSQENM DCLYETVKEIKEVAAA K D S V K E 0 0 1 2 1 1 3 0 0 0 1 1 1 0 0 3 1 0 1 2 0 0 18 0 2132.8878 Q9NWQ8 Q9NWQ8 168 185 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 4.8975E-16 147.7 By MS/MS By MS/MS 1 1 38995000 18411000 20584000 1018 2936 1146 2684;2685 2661;2662 2662 1166 8473 2 DSSSSLTDPQVSYVKSPAAER PSGLPEFKDSSSSLTD VKSPAAERRSGAVAGG K D S E R R 2 1 0 2 0 1 1 0 0 0 1 1 0 0 2 6 1 0 1 2 0 0 21 1 2223.0655 H7C3M7;O94887 H7C3M7 111 131 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 yes no 3 0.009048 54.253 By MS/MS By matching 1 1 9841000 5008400 4832600 1019 1285 1147 2686;2687 2663 2663 2376;2377 1 DSSTCPGDYVLSVSENSR RHGMFLVRDSSTCPGD LSVSENSRVSHYIINS R D S S R V 0 1 1 2 1 0 1 1 0 0 1 0 0 0 1 5 1 0 1 2 0 0 18 0 1971.848 P46109 P46109 40 57 CRKL Crk-like protein yes yes 2 0.009202 67.153 By MS/MS By matching 1 1 9104800 4089600 5015200 1020 1838 1148 2688;2689 2664 2664 3484;3485 1 DSTLIMQLLR TLSEESYKDSTLIMQL TLIMQLLRDNLTLWTS K D S L R D 0 1 0 1 0 1 0 0 0 1 3 0 1 0 0 1 1 0 0 0 0 0 10 0 1188.6536 P31946;P31947;P27348;E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80;P62258;K7EM20;Q04917;P61981 P62258 216 225 YWHAB;SFN;YWHAQ;YWHAZ;YWHAE;YWHAH;YWHAG 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein theta;14-3-3 protein zeta/delta;14-3-3 protein epsilon;14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed no no 2 2.2E-16 176.6 By MS/MS By MS/MS 2 2 28270000 17668000 10603000 1021 1936;1786;1768;838;1932;2001 1149;1150 2690;2691;2692;2693 2665;2666;2667 2665 319 3 DSYVGDEAQSK VMVGMGQKDSYVGDEA VGDEAQSKRGILTLKY K D S S K R 1 0 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 11 0 1197.515 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;C9JUM1;C9JZR7;C9JTX5;P68133;P68032;A6NL76;P63267;P62736;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 51 61 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle no no 2 0.0045615 90.149 By matching By MS/MS 1 1 37340000 15104000 22236000 1022 1928;1955 1151 2694;2695 2668 2668 1 DSYVGDEAQSKR VMVGMGQKDSYVGDEA GDEAQSKRGILTLKYP K D S K R G 1 1 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 12 1 1353.6161 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;C9JUM1;C9JZR7;C9JTX5;P68133;P68032;A6NL76;P63267;P62736;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 51 62 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle no no 2;3 0.00022663 95.618 By MS/MS By MS/MS 2 2 29045000 13059000 15986000 1023 1928;1955 1152 2696;2697;2698;2699 2669;2670 2669 2 DTASLSTTPSESPR RGVQVLPRDTASLSTT TTPSESPRAQATSRLS R D T P R A 1 1 0 1 0 0 1 0 0 0 1 0 0 0 2 4 3 0 0 0 0 0 14 0 1447.6791 H0YJ30;G3V582;F5H039;Q9NQX3 H0YJ30 192 205 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 2 9.0372E-05 122.75 By MS/MS By MS/MS 1 1 15945000 8837400 7107300 1024 955 1153 2700;2701 2671;2672 2671 1796 2 DTDGGPKEEESPV AAESPDQKDTDGGPKE PKEEESPV________ K D T P V - 0 0 0 2 0 0 3 2 0 0 0 1 0 0 2 1 1 0 0 1 0 0 13 1 1358.5838 P53985 P53985 488 500 SLC16A1 Monocarboxylate transporter 1 yes yes 2 1.0193E-09 140.33 By MS/MS By MS/MS 1 2 29275000 14390000 14885000 1025 1899 1154 2702;2703;2704 2673;2674;2675;2676 2675 3678 4 DTDSEEEIR TMMARKMKDTDSEEEI TDSEEEIREAFRVFDK K D T I R E 0 1 0 2 0 0 3 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 9 0 1092.4571 P0DP25;P0DP24;P0DP23;E7ETZ0;H0Y7A7;E7EMB3;Q96HY3;G3V361;G3V226 P0DP25 79 87 CALM1;CALM2 yes no 2 3.4997E-15 123.98 By matching By MS/MS 1 1 7100600 3411800 3688800 1026 788 1155 2705;2706 2677 2677 0 DTDVEEGSEVEDERPAWNSK IVDGQEEKDTDVEEGS ERPAWNSKLQYILAQV K D T S K L 1 1 1 3 0 0 5 1 0 0 0 1 0 0 1 2 1 1 0 2 0 0 20 1 2290.9826 Q9H2J7;F8VSG1 Q9H2J7 48 67 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes no 2;3 0.00049645 95.227 By matching By MS/MS 2 2 63446000 27679000 35767000 1027 2819 1156 2707;2708;2709;2710 2678;2679;2680 2680 5902 3 DTEEPLPVKESDQTLAALLSPK SNNNLVSKDTEEPLPV LAALLSPKESSGGEKE K D T P K E 2 0 0 2 0 1 3 0 0 0 4 2 0 0 3 2 2 0 0 1 0 0 22 1 2380.2373 P18583;H7C1M2 P18583 1678 1699 SON Protein SON yes no 3 1.9251E-60 183.63 By MS/MS By MS/MS 1 1 37079000 21419000 15660000 1028 1725 1157 2711;2712 2681;2682;2683;2684 2684 3239;7403 4 DTFEHDPSESIDEFNK SKSQEEPKDTFEHDPS ESIDEFNKSSATSGDI K D T N K S 0 0 1 3 0 0 3 0 1 1 0 1 0 2 1 2 1 0 0 0 0 0 16 0 1908.8014 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 189 204 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 9.3955E-05 97.621 By MS/MS By MS/MS 1 1 23504000 12327000 11177000 1029 2947;888 1158 2713;2714 2685;2686 2686 1652;1653 2 DTGKTPVEPEVAIHR ________________ EPEVAIHRIRITLTSR K D T H R I 1 1 0 1 0 0 2 1 1 1 0 1 0 0 2 0 2 0 0 2 0 0 15 1 1647.858 E5RIP1;E5RJX2;P60866 E5RIP1 5 19 RPS20 40S ribosomal protein S20 yes no 3 3.9604E-06 121.51 By MS/MS By MS/MS 1 1 17065000 0 17065000 1030 785 1159 2715;2716 2687;2688 2687 7063 2 DTGSEVPSGSGHGPCTPPPAPANFEDVAPTGSGEPGATRESPK SSMVLGARDTGSEVPS GATRESPKANGQNQAS R D T P K A 4 1 1 2 1 0 4 7 1 0 0 1 0 1 9 5 4 0 0 2 0 0 43 1 4200.8931 O15047 O15047 525 567 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 4 1.3187E-06 63.625 By matching By MS/MS 1 1 79491000 35380000 44111000 1031 1468 1160 2717;2718 2689 2689 2737;2738;2739;7295;7296 1 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK ________________ SLPEQEIKTLEEDEEE K D T I K T 0 0 2 5 0 2 6 0 3 2 1 1 0 1 3 3 4 0 0 1 0 0 34 0 3932.7097 C9JJ34;P43487 C9JJ34 6 39 RANBP1 Ran-specific GTPase-activating protein yes no 3;4 1.1146E-07 78.757 By MS/MS By MS/MS 2 2 628100000 271770000 356330000 1032 668 1161 2719;2720;2721;2722 2690;2691;2692;2693;2694 2694 1237;7033;7034 5 DTHPGSPGSPGPALRPLPAR KEHLRRHRDTHPGSPG ALRPLPAREKPHACCE R D T A R E 2 2 0 1 0 0 0 3 1 0 2 0 0 0 6 2 1 0 0 0 0 0 20 1 1979.0337 Q8N0Y2 Q8N0Y2 227 246 ZNF444 Zinc finger protein 444 yes yes 3 0.017019 49.463 By matching By MS/MS 1 1 14824000 6221900 8602000 1033 2453 1162 2723;2724 2695 2695 5008;5009 1 DTIIDVVGAPLTPNSR PGLGPDPKDTIIDVVG APLTPNSRKRRESASS K D T S R K 1 1 1 2 0 0 0 1 0 2 1 0 0 0 2 1 2 0 0 2 0 0 16 0 1666.889 Q9NPF5 Q9NPF5 434 449 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 2;3 1.0065E-07 134.82 By MS/MS By MS/MS 2 2 157370000 93558000 63816000 1034 2887 1163 2725;2726;2727;2728 2696;2697;2698;2699;2700 2696 6078;7868 5 DTIIDVVGAPLTPNSRK PGLGPDPKDTIIDVVG PLTPNSRKRRESASSS K D T R K R 1 1 1 2 0 0 0 1 0 2 1 1 0 0 2 1 2 0 0 2 0 0 17 1 1794.984 Q9NPF5 Q9NPF5 434 450 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 3 1.9411E-06 129.46 By MS/MS By matching 1 1 10546000 6362200 4183500 1035 2887 1164 2729;2730 2701 2701 6078;7868 1 DTNGSQFFITTVK VSMANAGKDTNGSQFF QFFITTVKTAWLDGKH K D T V K T 0 0 1 1 0 1 0 1 0 1 0 1 0 2 0 1 3 0 0 1 0 0 13 0 1456.7198 P23284 P23284 146 158 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 0.0015596 113.38 By MS/MS By MS/MS 1 1 6270900 3913500 2357400 1036 1754 1165 2731;2732 2702;2703 2702 2 DTPTSHVPSGPLSSSATSPVLLPALPR HVSPQDSKDTPTSHVP VLLPALPRRTPKQHYC K D T P R R 2 1 0 1 0 0 0 1 1 0 4 0 0 0 6 6 3 0 0 2 0 0 27 0 2683.4181 H3BSM9;Q9NSC2 H3BSM9 1005 1031 SALL1 Sal-like protein 1 yes no 3 2.3114E-07 90.136 By MS/MS By MS/MS 1 1 27492000 13583000 13909000 1037 1251 1166 2733;2734 2704;2705 2705 2331 2 DTQGPVSQPFQQPEKPGRVR ________________ PEKPGRVRRRKTRRER M D T V R R 0 2 0 1 0 4 1 2 0 0 0 1 0 1 4 1 1 0 0 2 0 0 20 2 2250.1505 M0QXP7;A6NJB7 M0QXP7 2 21 PRR19 Proline-rich protein 19 yes no 2 0.0057654 54.871 By matching By MS/MS 1 1 11600000 6081900 5518500 1038 475 1167 2735;2736 2706 2706 1 DTQSPSTCSEGLLGWSQK RGAGAELKDTQSPSTC GLLGWSQKDLQSEFGI K D T Q K D 0 0 0 1 1 2 1 2 0 0 2 1 0 0 1 4 2 1 0 0 0 0 18 0 1979.8895 Q9C0C2 Q9C0C2 709 726 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0018908 92.474 By MS/MS By MS/MS 1 1 23480000 12233000 11247000 1039 2791 1168 2737;2738 2707;2708;2709 2708 5811;7839 3 DTSATSQSVNGSPQAEQPSLESTSK EEGGVDAKDTSATSQS PSLESTSKEAFFSRVE K D T S K E 2 0 1 1 0 3 2 1 0 0 1 1 0 0 2 7 3 0 0 1 0 0 25 0 2535.1572 C9J0I9;Q86WB0;F8WAU5 C9J0I9 51 75 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 0.0036442 72.184 By matching By MS/MS 2 2 47178000 22335000 24843000 1040 624 1169 2739;2740;2741;2742 2710;2711 2710 1147;1148 2 DTSENADGQSDENKDDYTIPDEYR ENADDPNKDTSENADG YTIPDEYRIGPYQPNV K D T Y R I 1 1 2 6 0 1 3 1 0 1 0 1 0 0 1 2 2 0 2 0 0 0 24 1 2776.122 A8MXP9;D6REM6;A0A0R4J2E8;P43243;Q68E03;B3KM87 A8MXP9 805 828 MATR3;DKFZp686L22104 Matrin-3 yes no 3 0.0019956 71.492 By MS/MS 1 0 0 0 1041 503 1170 2743 2712 2712 916 1 DTSPDKGELVSDEEEDT REDFLRERDTSPDKGE VSDEEEDT________ R D T D T - 0 0 0 4 0 0 4 1 0 0 1 1 0 0 1 2 2 0 0 1 0 0 17 1 1864.7698 Q9UPU7 Q9UPU7 947 963 TBC1D2B TBC1 domain family member 2B yes yes 2 0.00071352 104.16 By MS/MS 1 30733000 0 30733000 1042 3070 1171 2744 2713 2713 6497 1 DTSPSSGSAVSSSK VQSLKTSRDTSPSSGS GSAVSSSKVLDKPSRL R D T S K V 1 0 0 1 0 0 0 1 0 0 0 1 0 0 1 7 1 0 0 1 0 0 14 0 1295.5841 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8 F8WF16 136 149 PPHLN1 Periphilin-1 yes no 2 0.0017116 98.754 By MS/MS By MS/MS 1 1 43423000 22327000 21096000 1043 594 1172 2745;2746 2714;2715;2716 2716 1084;7001 3 DTTVISHSPNTSYDTALEAR AATVAAQRDTTVISHS YDTALEARIQKEEEEI R D T A R I 2 1 1 2 0 0 1 0 1 1 1 0 0 0 1 3 4 0 1 1 0 0 20 0 2177.0237 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 707 726 AMOT Angiomotin yes no 2;3 1.7849E-86 201.22 By MS/MS By MS/MS 5 5 2073300000 1037500000 1035700000 1044 2197 1173;1174;1175 2747;2748;2749;2750;2751;2752;2753;2754;2755;2756 2717;2718;2719;2720;2721;2722;2723;2724;2725;2726;2727 2721 106 4386;4387;4388;7625 11 DTVIIVSEPSEDEESQGLPTMAR VQEKTFNKDTVIIVSE QGLPTMARRNDDISEL K D T A R R 1 1 0 2 0 1 4 1 0 2 1 0 1 0 2 3 2 0 0 2 0 0 23 0 2502.1796 D6RAY8;Q9H4L7 D6RAY8 118 140 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 0.022673 42.029 By MS/MS By MS/MS 1 1 17288000 11980000 5308300 1045 747 1176 2757;2758 2728;2729 2728 284 1350;1351 2 DTYSDRSGSSSPDSEITELK KGCRLSPRDTYSDRSG DSEITELKFPSINHD_ R D T L K F 0 1 0 3 0 0 2 1 0 1 1 1 0 0 1 6 2 0 1 0 0 0 20 1 2172.9659 P17812 P17812 565 584 CTPS1 CTP synthase 1 yes yes 2 0.001657 74.698 By MS/MS By matching 1 1 16543000 7648800 8894100 1046 1719 1177 2759;2760 2730 2730 3230;3231;3232;3233;8234 1 DTYSDRSGSSSPDSEITELKFPSINHD KGCRLSPRDTYSDRSG KFPSINHD________ R D T H D - 0 1 1 4 0 0 2 1 1 2 1 1 0 1 2 7 2 0 1 0 0 0 27 2 2983.3319 P17812 P17812 565 591 CTPS1 CTP synthase 1 yes yes 3 0.017312 49.618 By matching By MS/MS 1 1 23624000 11881000 11743000 1047 1719 1178 2761;2762 2731 2731 3230;3231;3232;3233;8234 1 DTYVSSFPR RKDETNARDTYVSSFP TYVSSFPRAPSTSDSV R D T P R A 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 2 1 0 1 1 0 0 9 0 1070.5033 P23193 P23193 124 132 TCEA1 Transcription elongation factor A protein 1 yes yes 2 0.0019759 114.5 By MS/MS 1 3628100 3628100 0 1048 1752 1179 2763 2732 2732 8246 1 DVAAEAVARSPK QAARAAGRDVAAEAVA EAVARSPKRPAWGSRR R D V P K R 4 1 0 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 0 2 0 0 12 1 1212.6463 Q9UKY4 Q9UKY4 32 43 POMT2 Protein O-mannosyl-transferase 2 yes yes 2 6.4993E-05 101.2 By MS/MS By matching 1 1 11382000 6413900 4967800 1049 3033 1180 2764;2765 2733 2733 6388 0 DVATSPISPTENNTTPPDALTR PLPVTPTRDVATSPIS TPPDALTRNTEKQKKK R D V T R N 2 1 2 2 0 0 1 0 0 1 1 0 0 0 4 2 5 0 0 1 0 0 22 0 2296.1183 H0YCM0;E9PM17;B3KNX7;Q13153 H0YCM0 107 128 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 2;3 1.7568E-35 169.51 By MS/MS By MS/MS 3 3 120620000 56340000 64281000 1050 536 1181 2766;2767;2768;2769;2770;2771 2734;2735;2736;2737;2738;2739 2737 1012;6985;6986 6 DVDASPSPLSVQDLK PPAELVQRDVDASPSP PLSVQDLKGLGYEKGK R D V L K G 1 0 0 3 0 1 0 0 0 0 2 1 0 0 2 3 0 0 0 2 0 0 15 0 1569.7886 Q8IWZ8 Q8IWZ8 405 419 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 2 0.00047828 105.13 By MS/MS By MS/MS 2 2 63479000 31689000 31789000 1051 2432 1182 2772;2773;2774;2775 2740;2741;2742;2743 2742 4976;4977 4 DVDDGSGSPHSPHQLSSK PEAAFLSRDVDDGSGS SPHQLSSKSLPSQNLS R D V S K S 0 0 0 3 0 1 0 2 2 0 1 1 0 0 2 5 0 0 0 1 0 0 18 0 1848.8238 F5GWT4;Q9H4A3 F5GWT4 1774 1791 WNK1 Serine/threonine-protein kinase WNK1 yes no 3 0.018314 54.004 By MS/MS 2 30754000 30754000 0 1052 941 1183;1184 2776;2777 2744;2745 2745 1761;1762;1763 1 DVDETGITVASLER DLSLYIPRDVDETGIT ITVASLERFSTYTSDK R D V E R F 1 1 0 2 0 0 2 1 0 1 1 0 0 0 0 1 2 0 0 2 0 0 14 0 1503.7417 Q8WU90;H7C466 Q8WU90 341 354 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 2 0.031143 59.634 By MS/MS 1 3331400 3331400 0 1053 2551 1185 2778 2746 2746 1 DVDVSEDSPPPLPER TTHSGAEKDVDVSEDS SPPPLPERTPESFVLA K D V E R T 0 1 0 3 0 0 2 0 0 0 1 0 0 0 4 2 0 0 0 2 0 0 15 0 1650.7737 Q05209 Q05209 666 680 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 2 0.0187 65.241 By MS/MS 1 4877800 0 4877800 1054 2002 1186 2779 2747 2747 3857 1 DVEDMELSDVEDDGSK PEPVTDNRDVEDMELS DVEDDGSKIIVEDRKE R D V S K I 0 0 0 5 0 0 3 1 0 0 1 1 1 0 0 2 0 0 0 2 0 0 16 0 1781.7149 Q5VT52 Q5VT52 367 382 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2;3 3.5037E-209 270.51 By MS/MS By MS/MS 3 3 420030000 205390000 214630000 1055 2264 1187;1188 2780;2781;2782;2783;2784;2785 2748;2749;2750;2751;2752;2753;2754 2754 906 4537 7 DVEMGNSVIEENEMK SRHELKNRDVEMGNSV VIEENEMKKPYQLIAQ R D V M K K 0 0 2 1 0 0 4 1 0 1 0 1 2 0 0 1 0 0 0 2 0 0 15 0 1722.7441 A0A087X0U3;A0A087WT87;P43003 A0A087X0U3 394 408 SLC1A3 Amino acid transporter;Excitatory amino acid transporter 1 yes no 2 0.018264 58.159 By MS/MS By MS/MS 1 1 10139000 3250100 6889200 1056 28 1189 2786;2787 2755;2756 2755 13;14 57 2 DVESPSWR INRSLASKDVESPSWR DVESPSWRSTTVLGLL K D V W R S 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 2 0 1 0 1 0 0 8 0 974.44576 F5H6E2;O00159 F5H6E2 381 388 MYO1C Unconventional myosin-Ic yes no 2 0.01488 78.098 By MS/MS 1 3599400 3599400 0 1057 982 1190 2788 2757 2757 1843 1 DVLDIEQFSTVK DPQAIYCKDVLDIEQF IEQFSTVKGVELEPTD K D V V K G 0 0 0 2 0 1 1 0 0 1 1 1 0 1 0 1 1 0 0 2 0 0 12 0 1392.7137 F8W9W2;P43250;P34947 F8W9W2 442 453 GRK6;GRK5 G protein-coupled receptor kinase 6;G protein-coupled receptor kinase 5 yes no 2 1.8023E-26 179.83 By MS/MS By MS/MS 1 1 24067000 12512000 11555000 1058 1041 1191 2789;2790 2758;2759 2758 1966;7165 2 DVMLENYRNLVFLGWRIMAR PVQKALYKDVMLENYR LGWRIMARSHLTATSV K D V A R S 1 3 2 1 0 0 1 1 0 1 3 0 2 1 0 0 0 1 1 2 0 0 20 2 2495.293 M0QYU5;M0R0C2 M0QYU5 34 53 ZNF616 yes no 3 0.016077 48.677 By MS/MS By matching 1 1 10624000 5662900 4961100 1059 1410 1192 2791;2792 2760 2760 489 8172 1 DVMLENYSNMVSLGFCIY LEQRDLYRDVMLENYS VSLGFCIY________ R D V I Y - 0 0 2 1 1 0 1 1 0 1 2 0 2 1 0 2 0 0 2 2 0 0 18 0 2153.9472 E9PQ03 E9PQ03 32 49 ZNF790 yes yes 2 0.030915 49.425 By MS/MS 1 0 0 0 1060 926 1193 2793 2761 2761 347 1 DVMSDETNNEETESPSQEFVNITK MDEMSTPRDVMSDETN QEFVNITKYESSLYSQ R D V T K Y 0 0 3 2 0 1 5 0 0 1 0 1 1 1 1 3 3 0 0 2 0 0 24 0 2742.1814 P46821 P46821 1141 1164 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.001003 65.833 By MS/MS 1 17968000 0 17968000 1061 1840 1194 2794 2762 2762 705 3492 1 DVNDNFPMFRDSQYSAR CECNIKVKDVNDNFPM RDSQYSARIEENILSS K D V A R I 1 2 2 3 0 1 0 0 0 0 0 0 1 2 1 2 0 0 1 1 0 0 17 1 2060.901 P32926 P32926 259 275 DSG3 Desmoglein-3 yes yes 2 0.027227 55.314 By MS/MS 1 0 0 0 1062 1788 1195 2795 2763 2763 675 3373 1 DVNSSSPVMLAFK HNQRREGKDVNSSSPV SPVMLAFK________ K D V F K - 1 0 1 1 0 0 0 0 0 0 1 1 1 1 1 3 0 0 0 2 0 0 13 0 1393.6912 Q9NRI2;C4P0D4;Q5VVQ1;C4P0D6;C4P0D8;Q99598 Q9NRI2 28 40 TRAX;DISC1;TSNAX Translin-associated protein X yes no 2 0.00052252 96.113 By matching By MS/MS 1 1 5796100 3179100 2617000 1063 615 1196 2796;2797 2764 2764 1119 0 DVPPDILLDSPER SLPCSSPRDVPPDILL ILLDSPERKQKKQKKM R D V E R K 0 1 0 3 0 0 1 0 0 1 2 0 0 0 3 1 0 0 0 1 0 0 13 0 1464.746 Q6KC79 Q6KC79 309 321 NIPBL Nipped-B-like protein yes yes 2 0.023451 63.29 By matching By MS/MS 1 1 15794000 9173700 6620600 1064 2307 1197 2798;2799 2765;2766 2766 4651 2 DVPPDILLDSPERK SLPCSSPRDVPPDILL LLDSPERKQKKQKKMK R D V R K Q 0 1 0 3 0 0 1 0 0 1 2 1 0 0 3 1 0 0 0 1 0 0 14 1 1592.841 Q6KC79 Q6KC79 309 322 NIPBL Nipped-B-like protein yes yes 3 0.012096 57.136 By matching By MS/MS 2 2 24505000 14645000 9860000 1065 2307 1198 2800;2801;2802;2803 2767;2768 2767 4651 1 DVQEIFR LEQLDMRRDVQEIFRM RDVQEIFRMTPHEKQV R D V F R M 0 1 0 1 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 7 0 905.46068 A0A140T9X3;A0A0G2JJZ9;Q5STU3;O00148;Q13838;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;A0A140T996;F6S4E6;A0A0A0MT12;F6TRA5;F6UJC5;A0A140TA18;K7EQN7;F6WLT2 A0A140T9X3 110 116 DDX39B;DDX39A ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.0079984 124.37 By MS/MS 1 0 0 0 1066 352 1199 2804 2769 2769 1 DVSLGTYGSR QDWEFQKRDVSLGTYG SLGTYGSRAAEPQEQE R D V S R A 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 2 1 0 1 1 0 0 10 0 1053.5091 Q9C0C2 Q9C0C2 934 943 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0098988 95.815 By MS/MS 1 0 0 0 1067 2791 1200 2805 2770 2770 5812 1 DVSPFDHSR NKNRNRYRDVSPFDHS VSPFDHSRIKLHQEDN R D V S R I 0 1 0 2 0 0 0 0 1 0 0 0 0 1 1 2 0 0 0 1 0 0 9 0 1058.4781 P18031 P18031 48 56 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 0.021365 65.465 By MS/MS By matching 1 1 38529000 21536000 16993000 1068 1721 1201 2806;2807 2771 2771 3235 1 DVTLSPVK TSTEGKDKDVTLSPVK DVTLSPVKAGPATTTS K D V V K A 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 2 0 0 8 0 857.48583 Q8NFC6 Q8NFC6 1527 1534 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.027377 65.627 By MS/MS By matching 1 1 18113000 8829100 9284300 1069 2517 1202 2808;2809 2772 2772 5138 1 DVTNFTVGGFAPMSPR LAGGSKPRDVTNFTVG GFAPMSPRISSPMHPS R D V P R I 1 1 1 1 0 0 0 2 0 0 0 0 1 2 2 1 2 0 0 2 0 0 16 0 1694.8086 O00267 O00267 653 668 SUPT5H Transcription elongation factor SPT5 yes yes 2;3 1.1456E-64 199.91 By MS/MS By MS/MS 4 3 402180000 189880000 212300000 1070 1431 1203;1204 2810;2811;2812;2813;2814;2815;2816 2773;2774;2775;2776;2777;2778;2779 2777 503 2629 7 DVTPPPETEVVLIK ETEMALGKDVTPPPET ETEVVLIKNVCLPPEM K D V I K N 0 0 0 1 0 0 2 0 0 1 1 1 0 0 3 0 2 0 0 3 0 0 14 0 1535.8447 E7EVA0;P27816 E7EVA0 536 549 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 1.61E-10 139.64 By MS/MS By MS/MS 2 2 389230000 214750000 174480000 1071 828 1205 2817;2818;2819;2820 2780;2781;2782;2783;2784 2782 7093 5 DVVLSTSPK RQGSWDSRDVVLSTSP VVLSTSPKLLATATAN R D V P K L 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 2 1 0 0 2 0 0 9 0 944.51786 A0A075B784;Q9P275 A0A075B784 576 584 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.017557 75.788 By MS/MS By MS/MS 1 1 21705000 9880700 11824000 1072 19 1206 2821;2822 2785;2786 2786 36 2 DVVQAYPEVR DFLLVVLRDVVQAYPE VQAYPEVRIVLMSATI R D V V R I 1 1 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 1 3 0 0 10 0 1174.5982 Q08211 Q08211 529 538 DHX9 ATP-dependent RNA helicase A yes yes 2 0.013356 80.688 By MS/MS 1 1735200 0 1735200 1073 2012 1207 2823 2787 2787 1 DVYDKVDYLSSLGK EILSFTIKDVYDKVDY DYLSSLGKTQTAVVQR K D V G K T 0 0 0 3 0 0 0 1 0 0 2 2 0 0 0 2 0 0 2 2 0 0 14 1 1600.7985 K7EKW9;J3QLD9;E7EMK3;Q14254 K7EKW9 90 103 FLOT2 Flotillin-2 yes no 2 1.6699E-21 161.25 By MS/MS By matching 1 1 20884000 9288400 11595000 1074 791 1208 2824;2825 2788 2788 8119 1 DVYLSPR REPLPSRRDVYLSPRD RDVYLSPRDDGYSTKD R D V P R D 0 1 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 7 0 848.43922 P38159;H0Y6E7;H3BT71;Q96E39;H3BUY5 P38159 204 210 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 2 0.025822 92.051 By MS/MS By matching 1 1 1105000000 579520000 525470000 1075 1806 1209 2826;2827 2789 2789 3412 1 DVYLSPRDDGYSTK REPLPSRRDVYLSPRD RDDGYSTKDSYSSRDY R D V T K D 0 1 0 3 0 0 0 1 0 0 1 1 0 0 1 2 1 0 2 1 0 0 14 1 1614.7526 P38159;H0Y6E7;H3BT71;Q96E39;H3BUY5 P38159 204 217 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 2 0.0018869 94.487 By MS/MS By matching 1 1 60031000 32275000 27755000 1076 1806 1210 2828;2829 2790 2790 3412 1 DWEDDSDEDMSNFDR SVDFNNWKDWEDDSDE EDMSNFDRFSEMMNNM K D W D R F 0 1 1 6 0 0 2 0 0 0 0 0 1 1 0 2 0 1 0 0 0 0 15 0 1874.6537 A0A087WYT3;Q15185;B4DDC6 A0A087WYT3 112 126 PTGES3 Prostaglandin E synthase 3 yes no 2;3 5.9307E-11 134.02 By MS/MS By MS/MS 2 1 0 0 0 1077 128 1211;1212 2830;2831;2832 2791;2792;2793 2793 4 47 216 3 DWQVGRAFNNSPKDLK D W L K 1 1 2 2 0 1 0 1 0 0 1 2 0 1 1 1 0 1 0 1 0 0 16 2 1873.9435 REV__F8WBH9 yes yes 2 0.021964 51.591 By MS/MS By matching 1 1 11034000 8983600 2050200 + 1078 3183 1213 2833;2834 2794 2794 6778 1 DYDDMSPR RPMPPSRRDYDDMSPR DYDDMSPRRGPPPPPP R D Y P R R 0 1 0 3 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 8 0 997.38111 P61978;Q5T6W2 P61978 279 286 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0030316 96.171 By MS/MS By MS/MS 2 2 308840000 163750000 145100000 1079 1931 1214;1215 2835;2836;2837;2838 2795;2796;2797;2798;2799;2800;2801;2802;2803;2804;2805;2806;2807 2804 758 3723 13 DYDEEEQGYDSEK KDVKQVTRDYDEEEQG EQGYDSEKEKKEEKKP R D Y E K E 0 0 0 3 0 1 4 1 0 0 0 1 0 0 0 1 0 0 2 0 0 0 13 0 1605.5955 Q5T757;Q05519 Q5T757 364 376 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.0036973 83.877 By MS/MS 1 3449900 3449900 0 1080 2003 1216 2839 2808 2808 3862 1 DYDEEEQGYDSEKEK KDVKQVTRDYDEEEQG GYDSEKEKKEEKKPIE R D Y E K K 0 0 0 3 0 1 5 1 0 0 0 2 0 0 0 1 0 0 2 0 0 0 15 1 1862.733 Q5T757;Q05519 Q5T757 364 378 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2;3 8.0435E-54 196.18 By MS/MS By MS/MS 2 2 122000000 61382000 60619000 1081 2003 1217 2840;2841;2842;2843 2809;2810;2811 2811 3862 3 DYDEEEQGYDSEKEKK KDVKQVTRDYDEEEQG YDSEKEKKEEKKPIET R D Y K K E 0 0 0 3 0 1 5 1 0 0 0 3 0 0 0 1 0 0 2 0 0 0 16 2 1990.828 Q5T757;Q05519 Q5T757 364 379 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2;3 1.3277E-22 160.09 By matching By MS/MS 2 2 131690000 59490000 72202000 1082 2003 1218 2844;2845;2846;2847 2812;2813 2813 3862 2 DYDSPERER GDRYDDYRDYDSPERE YDSPERERERRNSDRS R D Y E R E 0 2 0 2 0 0 2 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 9 1 1165.5 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910 P52756 56 64 RBM5 RNA-binding protein 5 yes no 2 0.029078 70.728 By MS/MS By matching 1 1 11979000 6378700 5600100 1083 1891 1219 2848;2849 2814 2814 1 DYEIESQNPLASPTNTLLGSAK GALVFLSKDYEIESQN NTLLGSAKEQRYQRGL K D Y A K E 2 0 2 1 0 1 2 1 0 1 3 1 0 0 2 3 2 0 1 0 0 0 22 0 2347.1543 Q7Z417 Q7Z417 618 639 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2;3 1.2226E-106 214.14 By MS/MS By MS/MS 2 2 349880000 175140000 174750000 1084 2380 1220 2850;2851;2852;2853 2815;2816;2817;2818 2817 4832 4 DYEPPSPSPAPGAPPPPPQR LCRPPLPRDYEPPSPS APPPPPQRNASYLKTQ R D Y Q R N 2 1 0 1 0 1 1 1 0 0 0 0 0 0 10 2 0 0 1 0 0 0 20 0 2052.9905 A8MQ02;J3KN01;P55196;H0Y8L4 A8MQ02 1648 1667 MLLT4 Afadin yes no 2;3 1.7448E-06 129.76 By MS/MS By MS/MS 4 3 75657000 32940000 42716000 1085 494 1221;1222 2854;2855;2856;2857;2858;2859;2860 2819;2820;2821;2822;2823;2824;2825;2826 2824 898;8056 8 DYFEEYGK DTEEHHLRDYFEEYGK DYFEEYGKIDTIEIIT R D Y G K I 0 0 0 1 0 0 2 1 0 0 0 1 0 1 0 0 0 0 2 0 0 0 8 0 1049.4342 P22626;A0A087WUI2 P22626 130 137 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.024466 86.794 By MS/MS By MS/MS 1 1 13066000 5372400 7693300 1086 1749 1223 2861;2862 2827;2828 2828 2 DYFEQYGK DTEEHHLRDYFEQYGK DYFEQYGKIEVIEIMT R D Y G K I 0 0 0 1 0 1 1 1 0 0 0 1 0 1 0 0 0 0 2 0 0 0 8 0 1048.4502 F8W6I7;P09651;F8VTQ5;F8VZ49;Q32P51;F8VYN5 F8W6I7 123 130 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 0.018956 99.375 By MS/MS By MS/MS 1 1 36986000 16067000 20919000 1087 1033 1224 2863;2864 2829;2830 2829 2 DYIWNTLNSGR DVSDEKLRDYIWNTLN WNTLNSGRVVPGYGHA R D Y G R V 0 1 2 1 0 0 0 1 0 1 1 0 0 0 0 1 1 1 1 0 0 0 11 0 1337.6364 A0A0C4DGI3;B4DJV2;O75390;H0YIC4 A0A0C4DGI3 264 274 CS Citrate synthase;Citrate synthase, mitochondrial yes no 2 0.0044929 98.048 By matching By MS/MS 1 1 6456200 2979000 3477200 1088 321 1225 2865;2866 2831 2831 1 DYLLSESEDEGDNDGER EELADLPKDYLLSESE EGDNDGERKHQKLLEA K D Y E R K 0 1 1 4 0 0 4 2 0 0 2 0 0 0 0 2 0 0 1 0 0 0 17 0 1941.7712 Q9BVJ6 Q9BVJ6 25 41 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 2 0.014088 82.449 By MS/MS 1 0 0 0 1089 2757 1226 2867 2832 2832 5733;5734 1 DYLLSESEDEGDNDGERK EELADLPKDYLLSESE GDNDGERKHQKLLEAI K D Y R K H 0 1 1 4 0 0 4 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 18 1 2069.8662 Q9BVJ6 Q9BVJ6 25 42 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes yes 2 0.0031472 91.589 By MS/MS 1 0 0 0 1090 2757 1227 2868 2833 2833 5733;5734 1 DYNPYNYSDSISPFNK THSSPRSRDYNPYNYS DSISPFNKSALKEAMF R D Y N K S 0 0 3 2 0 0 0 0 0 1 0 1 0 1 2 3 0 0 3 0 0 0 16 0 1922.8323 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;H7C4X8;H7C5M8 E3W994 997 1012 CLASP2 CLIP-associating protein 2 yes no 2 1.8523E-16 152.94 By MS/MS By MS/MS 2 2 50826000 24848000 25978000 1091 774 1228 2869;2870;2871;2872 2834;2835;2836;2837;2838 2838 1386;8116 5 DYPVVSIEDPFDQDDWGAWQK DLYKSFIKDYPVVSIE DDWGAWQKFTASAGIQ K D Y Q K F 1 0 0 5 0 2 1 1 0 1 0 1 0 1 2 1 0 2 1 2 0 0 21 0 2509.1074 P06733 P06733 286 306 ENO1 Alpha-enolase yes yes 2 1.3662E-11 142.97 By MS/MS By MS/MS 1 1 32383000 17701000 14682000 1092 1646 1229 2873;2874 2839;2840 2840 2 DYQYSDQGIDY EYQDDYPRDYQYSDQG YSDQGIDY________ R D Y D Y - 0 0 0 3 0 2 0 1 0 1 0 0 0 0 0 1 0 0 3 0 0 0 11 0 1365.5361 Q15417 Q15417 319 329 CNN3 Calponin-3 yes yes 2 8.2094E-05 123.21 By MS/MS By MS/MS 3 3 71734000 32156000 39577000 1093 2138 1230 2875;2876;2877;2878;2879;2880 2841;2842;2843;2844;2845;2846 2843 4239;8349;8350 5 DYRALCDVGTAISCSR KAARARDRDYRALCDV GTAISCSRVFSSRAAA R D Y S R V 2 2 0 2 2 0 0 1 0 1 1 0 0 0 0 2 1 0 1 1 0 0 16 1 1842.8353 I3L3B4;F8W9H0;E9PLN8;Q9BQB6 I3L3B4 38 53 VKORC1 Vitamin K epoxide reductase complex subunit 1 yes no 2 0.026901 55.912 By MS/MS 1 0 0 0 1094 905 1231 2881 2847 2847 1683;1684 1 DYSPSRNPPEVEAR GLGPGEARDYSPSRNP NPPEVEAR________ R D Y A R - 1 2 1 1 0 0 2 0 0 0 0 0 0 0 3 2 0 0 1 1 0 0 14 1 1615.759 Q9HCM7 Q9HCM7 1032 1045 FBRSL1 Fibrosin-1-like protein yes yes 3 0.025767 51.463 By MS/MS 1 7616600 7616600 0 1095 2879 1232 2882 2848 2848 6066 0 DYTGCSTSESLSPVK YRRKNSKRDYTGCSTS SESLSPVKQAPRKSPS R D Y V K Q 0 0 0 1 1 0 1 1 0 0 1 1 0 0 1 4 2 0 1 1 0 0 15 0 1629.7192 O95297 O95297 199 213 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.0020115 87.429 By MS/MS By MS/MS 1 1 49774000 25030000 24744000 1096 1590 1233 2883;2884 2849;2850 2849 3012;3013 2 DYVDEQTGDGPVK DVPEELKRDYVDEQTG QTGDGPVKSVSRETLK R D Y V K S 0 0 0 3 0 1 1 2 0 0 0 1 0 0 1 0 1 0 1 2 0 0 13 0 1421.6311 H0Y7Q2;Q96JG6 H0Y7Q2 357 369 CCDC132 Coiled-coil domain-containing protein 132 yes no 2 0.001003 90.827 By MS/MS By matching 1 1 7065500 2620600 4444900 1097 1140 1234 2885;2886 2851 2851 8154 0 DYVDRSGNQVLSMARLAK IVQFVPFRDYVDRSGN LSMARLAKDVLAEIPE R D Y A K D 2 2 1 2 0 1 0 1 0 0 2 1 1 0 0 2 0 0 1 2 0 0 18 2 2022.0317 Q8IYJ1 Q8IYJ1 498 515 CPNE9 Copine-9 yes yes 3 0.026045 54.004 By matching By MS/MS 1 1 21689000 7309400 14380000 1098 2443 1235 2887;2888 2852 2852 4996 1 EAADLDAVPMSLSYEELVRR EPEGADPREAADLDAV SYEELVRRNVELFIAT R E A R R N 3 2 0 2 0 0 3 0 0 0 3 0 1 0 1 2 0 0 1 2 0 0 20 1 2263.1154 A0A0A6YYG7;Q6IBW4;H0YC55 A0A0A6YYG7 454 473 NCAPH2 Condensin-2 complex subunit H2 yes no 3 0.0097425 65.231 By MS/MS By matching 1 1 6404800 3843900 2561000 1099 282 1236 2889;2890 2853 2853 113 500 1 EAAENSLVAYK FATGNDRKEAAENSLV ENSLVAYKAASDIAMT K E A Y K A 3 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 11 0 1193.5928 P62258;K7EM20 P62258 143 153 YWHAE 14-3-3 protein epsilon yes no 2 0.025325 72.243 By MS/MS 1 10480000 10480000 0 1100 1936 1237 2891 2854 2854 1 EAAEPLSEPKEDQEAAELLSEPEEESER HIFQLFWREAAEPLSE EPEEESERHILELEEV R E A E R H 4 1 0 1 0 1 11 0 0 0 3 1 0 0 3 3 0 0 0 0 0 0 28 1 3140.4157 A0A0A0MTR7;A0A0A0MTC1;Q63HN8 A0A0A0MTR7 1239 1266 RNF213 E3 ubiquitin-protein ligase RNF213 yes no 3 0.0015771 58.919 By matching By MS/MS 1 1 50930000 23456000 27474000 1101 269 1238 2892;2893 2855;2856 2855 475 2 EAAFSPGQQDWSR SLSVGPQREAAFSPGQ PGQQDWSRDFCIEASE R E A S R D 2 1 0 1 0 2 1 1 0 0 0 0 0 1 1 2 0 1 0 0 0 0 13 0 1477.6586 Q9C0C2 Q9C0C2 1099 1111 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.025987 61.649 By MS/MS By matching 1 1 26760000 15034000 11726000 1102 2791 1239 2894;2895 2857 2857 5813 1 EAALPPVSPLK RGRDAVKREAALPPVS LPPVSPLKAALSEEEL R E A L K A 2 0 0 0 0 0 1 0 0 0 2 1 0 0 3 1 0 0 0 1 0 0 11 0 1120.6492 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1061 1071 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 4.0544E-10 161.25 By MS/MS By MS/MS 1 1 505330000 278640000 226690000 1103 826 1240 2896;2897 2858;2859;2860;2861;2862;2863;2864;2865;2866;2867;2868;2869;2870;2871 2861 1524 14 EAALPPVSPLKAALSEEELEK RGRDAVKREAALPPVS LSEEELEKKSKAIIEE R E A E K K 4 0 0 0 0 0 5 0 0 0 4 2 0 0 3 2 0 0 0 1 0 0 21 1 2220.1889 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1061 1081 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 0.011391 51.684 By MS/MS 1 4494300 4494300 0 1104 826 1241 2898 2872;2873 2873 1524 2 EAANEAGDSSQDEAEDDVK ADAKHREREAANEAGD DEAEDDVKQITVRFSR R E A V K Q 4 0 1 4 0 1 4 1 0 0 0 1 0 0 0 2 0 0 0 1 0 0 19 0 1978.7876 A0A0C4DH01;Q9NVU0 A0A0C4DH01 117 135 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes no 2 0.00034872 112.82 By MS/MS By MS/MS 1 1 12109000 6244100 5864600 1105 329 1242 2899;2900 2874;2875 2874 580;581 2 EAARSPDKPGGSPSASR QAETREAREAARSPDK GGSPSASRRKGRASEH R E A S R R 3 2 0 1 0 0 1 2 0 0 0 1 0 0 3 4 0 0 0 0 0 0 17 2 1668.818 Q9Y3T9 Q9Y3T9 45 61 NOC2L Nucleolar complex protein 2 homolog yes yes 3 0.00023998 110.34 By MS/MS By MS/MS 3 3 209300000 46683000 162620000 1106 3112 1243;1244 2901;2902;2903;2904;2905;2906 2876;2877;2878;2879;2880 2880 6672;6673 5 EAASSPAGEPLR PSAAGADREAASSPAG SPAGEPLRKRPRRDGP R E A L R K 3 1 0 0 0 0 2 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 12 0 1183.5833 Q96EB6 Q96EB6 23 34 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 2 0.00076668 103.14 By MS/MS By MS/MS 1 1 79414000 44276000 35138000 1107 2641 1245 2907;2908 2881;2882 2882 5447;5448 2 EAASSSSGTQPAPPAPASPWDSK RKRSGEAKEAASSSSG PASPWDSKKHRSRDRK K E A S K K 5 0 0 1 0 1 1 1 0 0 0 1 0 0 5 6 1 1 0 0 0 0 23 0 2225.0237 Q9H7N4 Q9H7N4 531 553 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.014942 56.768 By matching By MS/MS 1 1 26800000 16047000 10753000 1108 2849 1246 2909;2910 2883 2883 5993 1 EAASSSSGTQPAPPAPASPWDSKK RKRSGEAKEAASSSSG ASPWDSKKHRSRDRKP K E A K K H 5 0 0 1 0 1 1 1 0 0 0 2 0 0 5 6 1 1 0 0 0 0 24 1 2353.1186 Q9H7N4 Q9H7N4 531 554 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 3 7.7332E-05 78.419 By MS/MS 1 11900000 11900000 0 1109 2849 1247 2911 2884 2884 5993 1 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR RSCTSDTKEAATQEDP AEEEILLREFEERRSL K E A L R E 4 2 0 1 0 2 12 2 1 1 4 0 0 0 3 2 1 0 0 2 0 0 37 1 4114.9455 Q9BVJ6;X6RJY0 Q9BVJ6 386 422 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 3;4 1.2928E-05 62.706 By MS/MS By MS/MS 2 2 397500000 193500000 204010000 1110 2757 1248;1249 2912;2913;2914;2915 2885;2886;2887;2888 2887 5735;5736 4 EAAVSASDILQESAIHSPGTVEK DEEWRRCREAAVSASD HSPGTVEKEAKKKRKL R E A E K E 4 0 0 1 0 1 3 1 1 2 1 1 0 0 1 4 1 0 0 2 0 0 23 0 2338.1652 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 118 140 C12orf43 Uncharacterized protein C12orf43 yes no 2;3 1.4918E-05 100.01 By MS/MS By MS/MS 2 2 171280000 94262000 77016000 1111 795 1250 2916;2917;2918;2919 2889;2890;2891;2892;2893 2891 1419;7069 5 EADDDEEVDDNIPEMPSPK RCPNMAMKEADDDEEV IPEMPSPKKMHQGKKK K E A P K K 1 0 1 5 0 0 4 0 0 1 0 1 1 0 3 1 0 0 0 1 0 0 19 0 2143.8739 P26358 P26358 698 716 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2;3 4.3627E-119 223.86 By MS/MS By MS/MS 5 5 623090000 310440000 312650000 1112 1765 1251;1252 2920;2921;2922;2923;2924;2925;2926;2927;2928;2929 2894;2895;2896;2897;2898;2899;2900;2901;2902;2903;2904;2905;2906 2898 666 3330 13 EADDDEEVDDNIPEMPSPKK RCPNMAMKEADDDEEV PEMPSPKKMHQGKKKK K E A K K M 1 0 1 5 0 0 4 0 0 1 0 2 1 0 3 1 0 0 0 1 0 0 20 1 2271.9689 P26358 P26358 698 717 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 3 0.02599 57.788 By matching By MS/MS 1 1 20143000 10166000 9976500 1113 1765 1253 2930;2931 2907 2907 666 3330 1 EADDIVNWLK PKEYTAGREADDIVNW DDIVNWLKKRTGPAAT R E A L K K 1 0 1 2 0 0 1 0 0 1 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1201.5979 P07237;I3L3P5;I3L312 P07237 121 130 P4HB Protein disulfide-isomerase yes no 2 0.0026971 132.76 By MS/MS By MS/MS 1 1 6701500 2249600 4451900 1114 1651 1254 2932;2933 2908;2909 2909 2 EADIDGDGQVNYEEFVQMMTAK EEVDEMIREADIDGDG FVQMMTAK________ R E A A K - 2 0 1 3 0 2 3 2 0 1 0 1 2 1 0 0 1 0 1 2 0 0 22 0 2489.0727 P0DP25;P0DP24;P0DP23;E7ETZ0;H0Y7A7;E7EMB3;M0QZ52;Q96HY3 P0DP25 128 149 CALM1;CALM2;CALM3 yes no 2 0.00099483 65.472 By MS/MS 1 5390900 5390900 0 1115 788 1255 2934 2910 2910 293;294 8117 1 EADIDSSDESDIEEDIDQPSAHK AKKLEQSKEADIDSSD IDQPSAHKTKHDLMMK K E A H K T 2 0 0 6 0 1 4 0 1 3 0 1 0 0 1 4 0 0 0 0 0 0 23 0 2544.0623 Q9P2I0 Q9P2I0 414 436 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes yes 3 0.0099714 66.308 By MS/MS 1 0 0 0 1116 2983 1256 2935 2911 2911 6279;6280;6281 1 EADSSSDYVNMDFTK QKPTHEQREADSSSDY YVNMDFTKRESNTPAP R E A T K R 1 0 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 15 0 1707.6934 O14654 O14654 914 928 IRS4 Insulin receptor substrate 4 yes yes 2 7.0251E-11 138.2 By MS/MS By MS/MS 4 2 101360000 42889000 58473000 1117 1453 1257;1258;1259 2936;2937;2938;2939;2940;2941 2912;2913;2914;2915;2916;2917 2913 517 2682;8178 4 EADSSSDYVNMDFTKR QKPTHEQREADSSSDY VNMDFTKRESNTPAPS R E A K R E 1 1 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 16 1 1863.7945 O14654 O14654 914 929 IRS4 Insulin receptor substrate 4 yes yes 2;3 1.1212E-10 136.6 By MS/MS By MS/MS 4 4 313580000 167240000 146350000 1118 1453 1260;1261 2942;2943;2944;2945;2946;2947;2948;2949 2918;2919;2920;2921;2922;2923 2920 517 2682;8178 6 EAEALLQSMGLTPESPIVPPPMSPSSK SDLEKKRREAEALLQS PPMSPSSKSVSTPSEA R E A S K S 2 0 0 0 0 1 3 1 0 1 3 1 2 0 6 5 1 0 0 1 0 0 27 0 2792.3976 E9PGG1;E7ETL8;E7EQU2;E7EV09;E7EQL5 E9PGG1 59 85 DYNC1I2 yes no 2;3;4 3.4379E-40 163.15 By MS/MS By MS/MS 7 7 613200000 294020000 319180000 1119 807 1262;1263;1264 2950;2951;2952;2953;2954;2955;2956;2957;2958;2959;2960;2961;2962;2963 2924;2925;2926;2927;2928;2929;2930;2931;2932;2933;2934;2935;2936;2937 2935 301;302 1439;1440 14 EAEEGEDDRDSANGEDDS ELIKDDEKEAEEGEDD SANGEDDS________ K E A D S - 2 1 1 5 0 0 5 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 18 1 1938.6835 G3V2Q1;P07910;G3V4C1;G3V2D6 G3V4C1 288 305 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 no no 2 0.0067372 84.046 By MS/MS 2 0 0 0 1120 1069;1079 1265 2964;2965 2938;2939 2938 2021 2 EAEEGPTGASESQDSPR PAPPSKPKEAEEGPTG SESQDSPRKLKYEEPE K E A P R K 2 1 0 1 0 1 4 2 0 0 0 0 0 0 2 3 1 0 0 0 0 0 17 0 1745.734 H0Y507;Q5TCZ1 H0Y507 460 476 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.0013483 90.412 By MS/MS By MS/MS 1 1 9194300 5460900 3733400 1121 1125 1266 2966;2967 2940;2941 2940 2140 2 EAEFSDPENTR QSVGRQEKEAEFSDPE FSDPENTRTKKEQDWE K E A T R T 1 1 1 1 0 0 3 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 11 0 1293.5473 Q5T481 Q5T481 872 882 RBM20 RNA-binding protein 20 yes yes 2 0.00074199 109.6 By MS/MS By MS/MS 1 1 42004000 23622000 18382000 1122 2239 1267 2968;2969 2942;2943 2942 4486 2 EAEHLSSPWGESSPEELR GGWNIAGREAEHLSSP ESSPEELRFGSLTYSD R E A L R F 1 1 0 0 0 0 5 1 1 0 2 0 0 0 2 4 0 1 0 0 0 0 18 0 2038.9232 H3BNY4;Q6PJI9 H3BNY4 125 142 WDR59 WD repeat-containing protein 59 yes no 3 0.00080288 76.678 By MS/MS By MS/MS 1 1 16754000 8702600 8051600 1123 1238 1268 2970;2971 2944;2945 2944 2313;2314 2 EAELTFRQHLNSISMQSDFFLPK GKLFSPSKEAELTFRQ QSDFFLPKPRKLRNRH K E A P K P 1 1 1 1 0 2 2 0 1 1 3 1 1 3 1 3 1 0 0 0 0 0 23 1 2737.3534 H7C194;Q96RY5 H7C194 10 32 CRAMP1L Protein cramped-like yes no 3 0.020021 56.055 By MS/MS 1 11675000 0 11675000 1124 1275 1269 2972 2946 2946 2363 0 EAFEQPQTSSTPPRDLDSK NPGLKIPKEAFEQPQT PPRDLDSKACISIGNQ K E A S K A 1 1 0 2 0 2 2 0 0 0 1 1 0 1 3 3 2 0 0 0 0 0 19 1 2132.0022 A0A0A0MRF7;K7EIW3;P52564 A0A0A0MRF7 18 36 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes no 3 0.010352 58.635 By MS/MS 1 5908400 5908400 0 1125 211 1270 2973 2947 2947 6888 1 EAFQLFDR EDQTAEFKEAFQLFDR EAFQLFDRTGDGKILY K E A D R T 1 1 0 1 0 1 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 8 0 1024.4978 G8JLA2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;G3V1Y7 G8JLA2 15 22 MYL6 Myosin light polypeptide 6 yes no 2 0.018296 131.03 By MS/MS By MS/MS 1 1 20391000 11611000 8780100 1126 1107 1271 2974;2975 2948;2949 2948 2 EAFSLFDKDGDGTITTK EEQIAEFKEAFSLFDK GDGTITTKELGTVMRS K E A T K E 1 0 0 3 0 0 1 2 0 1 1 2 0 2 0 1 3 0 0 0 0 0 17 1 1843.884 P0DP25;P0DP24;P0DP23;E7ETZ0;H0Y7A7;E7EMB3;M0QZ52;F8WBR5;G3V479 P0DP25 15 31 CALM1;CALM2;CALM3 yes no 3 0.00054396 107.82 By MS/MS By MS/MS 1 1 10299000 5078500 5220100 1127 788 1272 2976;2977 2950;2951 2950 2 EAGELPTSPLHLLSPGTPR SEAENEDREAGELPTS LLSPGTPRSLDGSGSE R E A P R S 1 1 0 0 0 0 2 2 1 0 4 0 0 0 4 2 2 0 0 0 0 0 19 0 1971.0425 Q969R5;H7C228 Q969R5 60 78 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 yes no 2;3 0.00024699 89.816 By MS/MS By MS/MS 4 4 77858000 40274000 37584000 1128 2615 1273;1274;1275 2978;2979;2980;2981;2982;2983;2984;2985 2952;2953;2954;2955;2956;2957;2958 2954 5379;5380;7771;7772 7 EAGSPAQEFK NSSEEEAREAGSPAQE GSPAQEFKYQKSLPPR R E A F K Y 2 0 0 0 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 10 0 1062.4982 Q5JSZ5;Q5JT00 Q5JSZ5 610 619 PRRC2B Protein PRRC2B yes no 2 0.00036415 126.66 By MS/MS By MS/MS 1 1 39303000 20604000 18699000 1129 2220 1276 2986;2987 2959;2960 2959 4439 2 EAIQAYSESLMTSAPK SKKGSKDKEAIQAYSE SLMTSAPKGSVLQEAK K E A P K G 3 0 0 0 0 1 2 0 0 1 1 1 1 0 1 3 1 0 1 0 0 0 16 0 1724.8291 B7ZKQ9 B7ZKQ9 457 472 SCARB1 yes yes 2 0.0025793 74.392 By MS/MS By MS/MS 1 1 13958000 8600700 5357600 1130 598 1277 2988;2989 2961;2962 2962 237 8086 2 EAKPGAAEPEVGVPSSLSPSSPSSSWTETDVEER SSLFRWYKEAKPGAAE TETDVEERVYTPSNAD K E A E R V 3 1 0 1 0 0 6 2 0 0 1 1 0 0 5 8 2 1 0 3 0 0 34 1 3498.6274 F6T1Q0;Q6L8Q7 F6T1Q0 200 233 PDE12 2,5-phosphodiesterase 12 yes no 3 0.00087757 56.957 By MS/MS By MS/MS 2 2 150800000 78944000 71859000 1131 993 1278 2990;2991;2992;2993 2963;2964;2965;2966 2965 1865;1866;1867;1868 4 EALAEAALESPRPALVR HPEQENSREALAEAAL SPRPALVRSASSDTSE R E A V R S 5 2 0 0 0 0 3 0 0 0 3 0 0 0 2 1 0 0 0 1 0 0 17 1 1791.9843 J3QRP6;O14745 J3QRP6 152 168 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 3 9.5714E-05 99.941 By MS/MS By MS/MS 1 1 97789000 59175000 38614000 1132 1354 1279 2994;2995 2967;2968;2969 2967 2502 3 EALGLGPPAAQLTPPPAPVGLR LGPAGGDREALGLGPP PPAPVGLRGSGLRGLQ R E A L R G 4 1 0 0 0 1 1 3 0 0 4 0 0 0 6 0 1 0 0 1 0 0 22 0 2121.1946 A0A087WZ13;E9PAU2;Q8IY67 A0A087WZ13 451 472 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 2;3 2.2995E-46 176.88 By MS/MS By MS/MS 2 2 749360000 446540000 302820000 1133 134 1280 2996;2997;2998;2999 2970;2971;2972;2973;2974;2975;2976;2977;2978;2979;2980;2981 2981 6861 12 EALIVKQLEDAMR CDVLQEQKEALIVKQL KQLEDAMRE_______ K E A M R E 2 1 0 1 0 1 2 0 0 1 2 1 1 0 0 0 0 0 0 1 0 0 13 1 1514.8127 Q4AC99 Q4AC99 555 567 ACCSL Probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 yes yes 2 0.030836 53.756 By MS/MS By matching 1 1 18043000 8816500 9226100 1134 2192 1281 3000;3001 2982 2982 876 1 EALLSSAVDHGSDEVK REATKAAREALLSSAV DHGSDEVKFRQDLMNI R E A V K F 2 0 0 2 0 0 2 1 1 0 2 1 0 0 0 3 0 0 0 2 0 0 16 0 1655.8002 F8VQ14;F5GWF6;P78371 F8VQ14 139 154 CCT2 T-complex protein 1 subunit beta yes no 3 0.003953 86.497 By MS/MS 1 0 0 0 1135 939 1282 3002 2983 2983 1 EALNIIGDISTSTVSTPVPPPVDDTWLQSASSHSPTPQR LRMYHALKEALNIIGD SHSPTPQRRPVSSIHP K E A Q R R 2 1 1 3 0 2 1 1 1 3 2 0 0 0 6 7 5 1 0 3 0 0 39 0 4100.0338 K7ENE7;P50570 K7ENE7 20 58 DNM2 Dynamin-2 yes no 3 0.00047066 53.563 By matching By MS/MS 1 1 48756000 21099000 27658000 1136 1386 1283 3003;3004 2984 2984 2553 1 EALPMDTEVYESPYADPEEIRPK AADKGPQREALPMDTE DPEEIRPKEVYLDRKL R E A P K E 2 1 0 2 0 0 5 0 0 1 1 1 1 0 4 1 1 0 2 1 0 0 23 1 2678.2422 P43405 P43405 339 361 SYK Tyrosine-protein kinase SYK yes yes 3 0.0015058 66.889 By MS/MS 2 20913000 20913000 0 1137 1832 1284;1285 3005;3006 2985;2986;2987 2986 696 8265 3 EALPWGLEPQDVQSSDEMRSPEGYLR ________________ RSPEGYLRGNMSENEE R E A L R G 1 2 0 2 0 2 4 2 0 0 3 0 1 0 3 3 0 1 1 1 0 0 26 1 2988.3924 Q9H5H4 Q9H5H4 4 29 ZNF768 Zinc finger protein 768 yes yes 3 0.0019835 60.939 By MS/MS By MS/MS 1 1 46812000 22191000 24621000 1138 2838 1286 3007;3008 2988;2989;2990;2991 2989 1129 5959;5960 4 EALQDVEDENQ GDGEEQNKEALQDVED QDVEDENQ________ K E A N Q - 1 0 1 2 0 2 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1288.5419 P62258;I3L0W5 P62258 245 255 YWHAE 14-3-3 protein epsilon yes no 2 8.1205E-40 199.89 By MS/MS By MS/MS 1 1 155950000 74310000 81639000 1139 1936 1287 3009;3010 2992;2993 2993 2 EALSPCPSTVSTK DIRTGNTREALSPCPS CPSTVSTKSQPGSSAS R E A T K S 1 0 0 0 1 0 1 0 0 0 1 1 0 0 2 3 2 0 0 1 0 0 13 0 1375.6653 Q08AD1 Q08AD1 670 682 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 0.010916 72.681 By MS/MS By matching 1 1 11702000 5803200 5898400 1140 2017 1288 3011;3012 2994 2994 3890 1 EALTYDGALLGDR FDEVDSLKEALTYDGA DGALLGDRSLRVDIAE K E A D R S 2 1 0 2 0 0 1 2 0 0 3 0 0 0 0 0 1 0 1 0 0 0 13 0 1392.6885 Q15056 Q15056 97 109 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 2.734E-06 127.51 By MS/MS By MS/MS 1 1 13165000 8649800 4515600 1141 2125 1289 3013;3014 2995;2996 2995 2 EAMEDEANRADVGHR QDWPQQYREAMEDEAN NRADVGHRQIFVHNFR R E A H R Q 3 2 1 2 0 0 3 1 1 0 0 0 1 0 0 0 0 0 0 1 0 0 15 1 1698.738 Q9HCI5 Q9HCI5 935 949 MAGEE1 Melanoma-associated antigen E1 yes yes 2 0.027482 45.077 By MS/MS By MS/MS 1 1 27856000 16478000 11378000 1142 2876 1290 3015;3016 2997;2998 2997 1138 2 EANANGSSPEPVK TKQKQDSKEANANGSS GSSPEPVKAVEARSPG K E A V K A 2 0 2 0 0 0 2 1 0 0 0 1 0 0 2 2 0 0 0 1 0 0 13 0 1298.6103 Q3KQU3 Q3KQU3 735 747 MAP7D1 MAP7 domain-containing protein 1 yes yes 2 0.0035169 84.31 By MS/MS By MS/MS 3 3 13202000 8773900 4427800 1143 2187 1291;1292 3017;3018;3019;3020;3021;3022 2999;3000;3001;3002;3003 2999 4348;4349 4 EANLQQNEEKNHSDSSTSESEVSSVSPLK LPESTDSKEANLQQNE VSSVSPLKNKHPDEDA K E A L K N 1 0 3 1 0 2 5 0 1 0 2 2 0 0 1 8 1 0 0 2 0 0 29 1 3159.444 Q9NY27;H7C559;C9IZ04 Q9NY27 201 229 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 4 0.0068874 47.35 By matching By MS/MS 1 1 11057000 4476600 6580100 1144 2944 1293 3023;3024 3004 3004 6200;6201 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK AGASPVEKEAPAEGEA ASSTSSPKAEDGATPS K E A P K A 10 0 0 0 0 0 6 3 0 0 0 1 0 0 4 6 2 0 0 0 0 0 32 0 2914.2952 P29966 P29966 106 137 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3;4 4.884E-59 179.69 By MS/MS By MS/MS 7 6 2247500000 1146300000 1101200000 1145 1776 1294;1295 3025;3026;3027;3028;3029;3030;3031;3032;3033;3034;3035;3036;3037 3005;3006;3007;3008;3009;3010;3011;3012;3013;3014;3015;3016;3017;3018;3019;3020;3021;3022;3023;3024 3008 3347;3348;3349;3350;3351;7423;7424 20 EAPPPVLLTPK TSERRGDKEAPPPVLL PPVLLTPKAVGTPGGG K E A P K A 1 0 0 0 0 0 1 0 0 0 2 1 0 0 4 0 1 0 0 1 0 0 11 0 1160.6805 P48634 P48634 1339 1349 PRRC2A Protein PRRC2A yes yes 2 0.028817 72.243 By MS/MS By matching 1 1 20500000 11698000 8802100 1146 1846 1296 3038;3039 3025 3025 1 EAPSPTLR VRQSTFIKEAPSPTLR EAPSPTLRRKLEESAS K E A L R R 1 1 0 0 0 0 1 0 0 0 1 0 0 0 2 1 1 0 0 0 0 0 8 0 869.46068 P25054 P25054 2446 2453 APC Adenomatous polyposis coli protein yes yes 2 0.024248 60.167 By MS/MS 1 0 0 0 1147 1760 1297 3040 3026 3026 3324 1 EAQQKVPDEEENEESDNEKETEK SDPVKAWKEAQQKVPD DNEKETEKSDSVTDSG K E A E K S 1 0 2 2 0 2 9 0 0 0 0 3 0 0 1 1 1 0 0 1 0 0 23 2 2733.1737 P11388 P11388 1092 1114 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.00047914 79.029 By matching By MS/MS 1 1 90977000 43089000 47888000 1148 1682 1298 3041;3042 3027 3027 3168 1 EAQSSQATPVQTSQPDSSNIVKVSPR NKKNFENKEAQSSQAT NIVKVSPRESSSASLK K E A P R E 2 1 1 1 0 4 1 0 0 1 0 1 0 0 3 6 2 0 0 3 0 0 26 1 2740.3628 H7C5E4;Q8IZH2 H7C5E4 1076 1101 XRN1 5-3 exoribonuclease 1 yes no 3 6.7562E-05 77.731 By MS/MS 1 10954000 10954000 0 1149 1290 1299 3043 3028 3028 2388 1 EAQTLDSQIQETSI LSGGGDQREAQTLDSQ SQIQETSI________ R E A S I - 1 0 0 1 0 3 2 0 0 2 1 0 0 0 0 2 2 0 0 0 0 0 14 0 1561.7471 E7EVA0;P27816 E7EVA0 2284 2297 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.00026231 116.84 By MS/MS By matching 1 1 16625000 7959400 8665200 1150 828 1300 3044;3045 3029 3029 1534 1 EARNSWDSPAFSNDVIR LSKQTYHKEARNSWDS AFSNDVIRKRHYRIGL K E A I R K 2 2 2 2 0 0 1 0 0 1 0 0 0 1 1 3 0 1 0 1 0 0 17 1 1962.9184 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 494 510 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 3 0.00081171 80.508 By MS/MS By matching 1 1 9074800 5250000 3824800 1151 91 1301 3046;3047 3030 3030 161 1 EASPAPLAQGEPGR PERKGAVREASPAPLA LAQGEPGREDLPTRLP R E A G R E 3 1 0 0 0 1 2 2 0 0 1 0 0 0 3 1 0 0 0 0 0 0 14 0 1378.6841 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 1200 1213 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 0.0049506 79.804 By MS/MS By MS/MS 1 1 37171000 19879000 17292000 1152 371 1302 3048;3049 3031;3032 3031 683 2 EASPAPLAQGEPGREDLPTR PERKGAVREASPAPLA GREDLPTRLPALGEAH R E A T R L 3 2 0 1 0 1 3 2 0 0 2 0 0 0 4 1 1 0 0 0 0 0 20 1 2090.0392 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 1200 1219 PHRF1 PHD and RING finger domain-containing protein 1 yes no 3 0.0043237 60.325 By MS/MS By MS/MS 1 1 98879000 51117000 47762000 1153 371 1303 3050;3051 3033;3034 3033 683 2 EASRPPEEPSAPSPTLPAQFK TPPAPSSREASRPPEE PTLPAQFKQRAPMYNS R E A F K Q 3 1 0 0 0 1 3 0 0 0 1 1 0 1 6 3 1 0 0 0 0 0 21 1 2235.1172 H0Y3X6;A0A0C4DFX9;Q9H3P2 H0Y3X6 355 375 NELFA Negative elongation factor A yes no 3 0.0078011 55.62 By MS/MS By matching 1 1 104680000 53040000 51637000 1154 300 1304 3052;3053 3035 3035 528 1 EATAQKPTGSVGSTVTTPPPLVR LRQSQIQKEATAQKPT TTPPPLVRGTQNIPAG K E A V R G 2 1 0 0 0 1 1 2 0 0 1 1 0 0 4 2 5 0 0 3 0 0 23 1 2293.2278 Q86YP4 Q86YP4 173 195 GATAD2A Transcriptional repressor p66-alpha yes yes 3 5.6932E-76 199.87 By MS/MS By MS/MS 1 2 95655000 49485000 46170000 1155 2420 1305 3054;3055;3056 3036;3037 3037 7704 2 EATNTTSEPSAPSQDLLDLSPSPR LEQNKNQKEATNTTSE LDLSPSPRMPRATLGE K E A P R M 2 1 1 2 0 1 2 0 0 0 3 0 0 0 4 5 3 0 0 0 0 0 24 0 2512.1929 I3NI44;J3KQU4;I3L4I4;O75674 I3NI44 225 248 TOM1L1 TOM1-like protein 1 yes no 2;3 0.0011733 64.126 By MS/MS By MS/MS 3 3 64896000 34522000 30374000 1156 1313 1306 3057;3058;3059;3060;3061;3062 3038;3039;3040;3041 3038 2437;2438 4 EATQDLAATPYPTER PGLLSGAREATQDLAA ATPYPTERGPQGKAAD R E A E R G 3 1 0 1 0 1 2 0 0 0 1 0 0 0 2 0 3 0 1 0 0 0 15 0 1661.7897 F8WBW8;A0A075B747;Q9P281 F8WBW8 1125 1139 BAHCC1 BAH and coiled-coil domain-containing protein 1 yes no 3 0.01961 51.127 By matching By MS/MS 1 1 37257000 16370000 20888000 1157 17 1307 3063;3064 3042 3042 7976 0 ECPSDECGAGVFMASHFDR GKISRLRRECPSDECG FMASHFDRHYCGKCCL R E C D R H 2 1 0 2 2 0 2 2 1 0 0 0 1 2 1 2 0 0 0 1 0 0 19 0 2170.8507 P62979 P62979 120 138 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes yes 3 0.027707 46.663 By MS/MS 1 5593200 5593200 0 1158 1952 1308 3065 3043 3043 766 1 ECSPTSSLER SASRPRGRECSPTSSL SPTSSLERLCRHKHQR R E C E R L 0 1 0 0 1 0 2 0 0 0 1 0 0 0 1 3 1 0 0 0 0 0 10 0 1164.5081 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 1122 1131 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 0.010976 73.9 By matching By MS/MS 1 1 27698000 13925000 13773000 1159 371 1309 3066;3067 3044 3044 684 1 EDAEGVAAEEEQEGDSGEQETGATDARPR PDDMITQREDAEGVAA GATDARPRRRKPARLL R E D P R R 5 2 0 3 0 2 8 4 0 0 0 0 0 0 1 1 2 0 0 1 0 0 29 1 3032.2715 Q96KC8 Q96KC8 415 443 DNAJC1 DnaJ homolog subfamily C member 1 yes yes 3 1.1036E-09 105.32 By MS/MS By MS/MS 1 1 62090000 35382000 26708000 1160 2678 1310 3068;3069 3045;3046 3046 5535;7796 2 EDALDDSVSSSSVHASPLASSPVR EWDNYDLREDALDDSV PLASSPVRKNLFRFGE R E D V R K 3 1 0 3 0 0 1 0 1 0 2 0 0 0 2 8 0 0 0 3 0 0 24 0 2412.1405 P49792;J3KNE0;A6NKT7;Q7Z3J3;Q99666;O14715;J3KQ37 P49792 2231 2254 RANBP2;RGPD3;RGPD4;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 no no 3 2.8805E-06 92.034 By MS/MS By MS/MS 1 1 45920000 23647000 22273000 1161 1860;1455 1311 3070;3071 3047;3048;3049 3048 2703;2704;2705;2706;2707 3 EDALDDSVSSSSVHASPLASSPVRK EWDNYDLREDALDDSV LASSPVRKNLFRFGES R E D R K N 3 1 0 3 0 0 1 0 1 0 2 1 0 0 2 8 0 0 0 3 0 0 25 1 2540.2354 P49792;J3KNE0;A6NKT7;Q7Z3J3;Q99666;O14715;J3KQ37 P49792 2231 2255 RANBP2;RGPD3;RGPD4;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 no no 3;4 6.5558E-07 93.804 By MS/MS By MS/MS 3 3 299530000 146260000 153280000 1162 1860;1455 1312;1313 3072;3073;3074;3075;3076;3077 3050;3051;3052;3053;3054;3055 3052 2703;2704;2705;2706;2707 6 EDDDVIVNKPHVSDEEEEEPPFYHHPFK CKQIAQSKEDDDVIVN PFYHHPFKLSEPKPIF K E D F K L 0 0 1 4 0 0 6 0 3 1 0 2 0 2 4 1 0 0 1 3 0 0 28 1 3376.516 P18583;H7C1M2;H7C2G8;J3QSZ5 P18583 2117 2144 SON Protein SON yes no 4 5.2885E-07 81.808 By MS/MS By MS/MS 1 1 97586000 53670000 43916000 1163 1725 1314 3078;3079 3056;3057 3056 3240 2 EDDLNSFNATDLK SQRWITAKEDDLNSFN SFNATDLKDLSSHQLN K E D L K D 1 0 2 3 0 0 1 0 0 0 2 1 0 1 0 1 1 0 0 0 0 0 13 0 1480.6682 P09960 P09960 481 493 LTA4H Leukotriene A-4 hydrolase yes yes 2 0.0010156 115.29 By MS/MS By MS/MS 1 1 11508000 3292700 8214800 1164 1666 1315 3080;3081 3058;3059 3058 2 EDEISPPPPNPVVK AGTRTDSREDEISPPP PPPNPVVKGRRRRGAI R E D V K G 0 0 1 1 0 0 2 0 0 1 0 1 0 0 5 1 0 0 0 2 0 0 14 0 1516.7773 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644 K7EMU2 79 92 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 2 1.3698E-42 185.95 By MS/MS By MS/MS 1 1 48392000 22600000 25792000 1165 1365 1316 3082;3083 3060;3061;3062;3063 3062 2533 4 EDFDSTSSSSSTPPLQPR SSNSSNEREDFDSTSS STPPLQPRDSASPSTS R E D P R D 0 1 0 2 0 1 1 0 0 0 1 0 0 1 3 6 2 0 0 0 0 0 18 0 1936.865 K4DI93;Q13620 K4DI93 61 78 CUL4B Cullin-4B yes no 2 0.0054909 70.54 By MS/MS 1 9638400 0 9638400 1166 1364 1317 3084 3064 3064 2528;2529;7259 1 EDFQDISVPVQEDELSKVEESSEISPEPK CESLTERREDFQDISV SEISPEPKTEMKTLRW R E D P K T 0 0 0 3 0 2 7 0 0 2 1 2 0 1 3 5 0 0 0 3 0 0 29 1 3288.5409 O94782 O94782 451 479 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 3 0.00018978 68.074 By MS/MS By matching 1 1 54911000 29835000 25077000 1167 1566 1318 3085;3086 3065;3066 3066 2965;2966 2 EDGGTVGVFSPK AEMGVAVREDGGTVGV TVGVFSPKKTPHLVNL R E D P K K 0 0 0 1 0 0 1 3 0 0 0 1 0 1 1 1 1 0 0 2 0 0 12 0 1191.5772 O43896 O43896 485 496 KIF1C Kinesin-like protein KIF1C yes yes 2 0.015952 93.111 By MS/MS By MS/MS 1 1 0 0 0 1168 1511 1319 3087;3088 3067;3068 3067 2844 2 EDGHRTSTSAVPNLFVPLNTNPK KSKTKWTKEDGHRTST VPLNTNPKEVQEMRNK K E D P K E 1 1 3 1 0 0 1 1 1 0 2 1 0 1 3 2 3 0 0 2 0 0 23 1 2493.2612 P35611;E7EV99;E7ENY0;H0Y9H2 P35611 475 497 ADD1 Alpha-adducin yes no 3 0.028472 46.368 By MS/MS By matching 1 1 16549000 8707700 7841200 1169 1799 1320 3089;3090 3069 3069 1 EDGNEEDKENQGDETQGQQPPQR PPRQRQPREDGNEEDK QGQQPPQRRYRRNFNY R E D Q R R 0 1 2 3 0 5 5 3 0 0 0 1 0 0 2 0 1 0 0 0 0 0 23 1 2627.0968 H0Y449;P67809 H0Y449 307 329 YBX1 Nuclease-sensitive element-binding protein 1 yes no 3 0.00010395 94.176 By MS/MS By MS/MS 1 1 32373000 10972000 21401000 1170 1117 1321 3091;3092 3070;3071 3071 2 EDILENEDEQNSPPK WPEEKRLKEDILENED DEQNSPPKKGKRGRPP K E D P K K 0 0 2 2 0 1 4 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 15 0 1755.7799 Q9NTI5;A9IYQ1 Q9NTI5 1272 1286 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 6.8257E-21 155.37 By MS/MS By MS/MS 1 2 22750000 10029000 12721000 1171 2918 1322 3093;3094;3095 3072;3073;3074 3074 6159 3 EDILENEDEQNSPPKK WPEEKRLKEDILENED EQNSPPKKGKRGRPPK K E D K K G 0 0 2 2 0 1 4 0 0 1 1 2 0 0 2 1 0 0 0 0 0 0 16 1 1883.8749 Q9NTI5;A9IYQ1 Q9NTI5 1272 1287 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 0.0049066 92.952 By MS/MS By matching 1 1 9241400 4339800 4901500 1172 2918 1323 3096;3097 3075 3075 6159 0 EDINLSVRK IEVSTAKKEDINLSVR DINLSVRKLLNRHNIV K E D R K L 0 1 1 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1072.5877 H0YAL2;Q15645 H0YAL2 32 40 TRIP13 Pachytene checkpoint protein 2 homolog yes no 3 0.027514 46.129 By MS/MS 1 0 0 0 1173 1157 1324 3098 3076 3076 2198 1 EDLAAATPASPLVLLPLETR GGSPALLREDLAAATP VLLPLETRPAEEPQPS R E D T R P 4 1 0 1 0 0 2 0 0 0 5 0 0 0 3 1 2 0 0 1 0 0 20 0 2076.1467 A0A1B0GTL5 A0A1B0GTL5 1165 1184 yes yes 2 0.00061301 90.229 By matching By MS/MS 1 1 10403000 7121000 3281900 1174 410 1325 3099;3100 3077 3077 753 1 EDLRLPEGDLGKEIEQK LQDSGEVREDLRLPEG LGKEIEQKYDCGEEIL R E D Q K Y 0 1 0 2 0 1 4 2 0 1 3 2 0 0 1 0 0 0 0 0 0 0 17 2 1968.0164 I3L397;I3L504;P63241 I3L397 110 126 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 3 0.029911 48.131 By MS/MS 1 2791300 0 2791300 1175 1311 1326 3101 3078 3078 0 EDNPEEPSKEITSHEEGGGDVSPR TVDVQLPREDNPEEPS GGGDVSPRKEPQEPEV R E D P R K 0 1 1 2 0 0 6 3 1 1 0 1 0 0 3 3 1 0 0 1 0 0 24 1 2594.1368 A0A1B0GUH9;A0A1P0AZG4 A0A1B0GUH9 534 557 yes no 3 0.00022613 76.028 By MS/MS By MS/MS 1 1 73793000 45417000 28377000 1176 419 1327 3102;3103 3079;3080 3080 780 2 EDPQARPLEGSSSEDSPPEGQAPPSHSPR REDADIQREDPQARPL APPSHSPRGTKRRASW R E D P R G 2 2 0 2 0 2 4 2 1 0 1 0 0 0 7 6 0 0 0 0 0 0 29 1 3040.3758 Q12789 Q12789 1830 1858 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 8.9305E-05 70.449 By MS/MS By matching 1 1 20449000 9077500 11371000 1177 2025 1328 3104;3105 3081 3081 3935;3936 1 EDQEAAELLSEPEEESER AEPLSEPKEDQEAAEL EPEEESERHILELEEV K E D E R H 2 1 0 1 0 1 8 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 18 0 2088.8971 A0A0A0MTR7;A0A0A0MTC1;Q63HN8 A0A0A0MTR7 1249 1266 RNF213 E3 ubiquitin-protein ligase RNF213 yes no 2 1.6189E-15 146.18 By matching By MS/MS 1 1 15483000 7808100 7674500 1178 269 1329 3106;3107 3082 3082 475 1 EDSGLFSPIR PRPVKASREDSGLFSP SGLFSPIRSSAFSPLG R E D I R S 0 1 0 1 0 0 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1119.556 Q9UKA4 Q9UKA4 442 451 AKAP11 A-kinase anchor protein 11 yes yes 2 0.00067243 137.16 By MS/MS By MS/MS 1 1 86513000 49983000 36530000 1179 3021 1330 3108;3109 3083;3084 3083 6363 2 EDSGTFSLGK AEAPPLEREDSGTFSL SGTFSLGKMITAKPGK R E D G K M 0 0 0 1 0 0 1 2 0 0 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1039.4822 G5E9Q4;O75569 G5E9Q4 16 25 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 2 0.0068916 79.23 By MS/MS By MS/MS 1 1 102360000 51505000 50858000 1180 1101 1331 3110;3111 3085;3086 3085 2083 2 EDSQRPGAHLTVK EPKRAVSREDSQRPGA PGAHLTVKKIFVGGIK R E D V K K 1 1 0 1 0 1 1 1 1 0 1 1 0 0 1 1 1 0 0 1 0 0 13 1 1436.7372 F8W6I7;P09651;F8VZ49;Q32P51;F8VYN5;F8W646 F8W6I7 93 105 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 4 0.018293 45.347 By MS/MS By MS/MS 1 1 9106700 4686900 4419800 1181 1033 1332 3112;3113 3087;3088 3088 2 EDSRGSLIPEGATGFPDQGNTGENTR QNGHGIKREDSRGSLI GNTGENTRQSSTRSSV R E D T R Q 1 2 2 2 0 1 3 5 0 1 1 0 0 1 2 2 3 0 0 0 0 0 26 1 2704.2325 A0A0J9YW64;A6NIW2;Q5JSL3 A0A0J9YW64 1064 1089 DOCK11 Dedicator of cytokinesis protein 11 yes no 3 0.026669 41.609 By MS/MS By matching 1 1 14873000 7233300 7640000 1182 370 1333 3114;3115 3089 3089 678;679 1 EDSSEEEEEEIDDEEIER GDAWRMEREDSSEEEE IDDEEIERRRGMMRQR R E D E R R 0 1 0 3 0 0 10 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 18 0 2209.8506 P55081 P55081 130 147 MFAP1 Microfibrillar-associated protein 1 yes yes 2 0.017601 96.591 By MS/MS 1 0 0 0 1183 1909 1334 3116 3090 3090 3688;3689 1 EDVEVAESPLR SPPLLCTREDVEVAES EVAESPLRVLAETPDS R E D L R V 1 1 0 1 0 0 3 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 11 0 1242.6092 Q99567;J3KMX1 Q99567 510 520 NUP88 Nuclear pore complex protein Nup88 yes no 2 3.7E-29 188.15 By MS/MS By MS/MS 1 1 179640000 98900000 80743000 1184 2725 1335 3117;3118 3091;3092 3092 5656 2 EDYFEPISPDR KEEDAPHREDYFEPIS FEPISPDRNSVPQEGQ R E D D R N 0 1 0 2 0 0 2 0 0 1 0 0 0 1 2 1 0 0 1 0 0 0 11 0 1366.6041 Q69YN4 Q69YN4 215 225 KIAA1429 Protein virilizer homolog yes yes 2 0.00053316 112.02 By MS/MS By MS/MS 1 1 16019000 7278000 8741500 1185 2298 1336 3119;3120 3093;3094 3093 4624 1 EEADYSAFGTDTLIK LRIFIQKKEEADYSAF FGTDTLIKKKNVLTNV K E E I K K 2 0 0 2 0 0 2 1 0 1 1 1 0 1 0 1 2 0 1 0 0 0 15 0 1658.7675 Q9BYG5 Q9BYG5 97 111 PARD6B Partitioning defective 6 homolog beta yes yes 2 0.00047976 98.439 By MS/MS 1 6071400 0 6071400 1186 2778 1337 3121 3095 3095 5782 1 EEAENTLQSFR LQEEMLQREEAENTLQ ENTLQSFRQDVDNASL R E E F R Q 1 1 1 0 0 1 3 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 11 0 1322.6103 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 197 207 VIM Vimentin yes no 2 1.5276E-13 163.16 By matching By MS/MS 1 1 51114000 23177000 27937000 1187 1663 1338 3122;3123 3096 3096 1 EEAPASPLRPLYPQISPLK QFTSLYHKEEAPASPL YPQISPLKIHIPEPDL K E E L K I 2 1 0 0 0 1 2 0 0 1 3 1 0 0 5 2 0 0 1 0 0 0 19 1 2105.1521 P85037;U3KQ26 P85037 208 226 FOXK1 Forkhead box protein K1 yes no 3 0.00022934 93.181 By MS/MS By MS/MS 2 2 34998000 20206000 14792000 1188 1968 1339;1340 3124;3125;3126;3127 3097;3098;3099;3100;3101 3099 3757;3758;8313 5 EEAQKLLEQYK ITYVELQKEEAQKLLE QKLLEQYKEESKKALP K E E Y K E 1 0 0 0 0 2 3 0 0 0 2 2 0 0 0 0 0 0 1 0 0 0 11 1 1377.714 Q00839 Q00839 660 670 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.026275 49.536 By MS/MS By matching 1 1 6346500 3510000 2836500 1189 1976 1341 3128;3129 3102 3102 1 EEASDDDMEGDEAVVR EDVYGEVREEASDDDM EGDEAVVRCTLSANLV R E E V R C 2 1 0 4 0 0 4 1 0 0 0 0 1 0 0 1 0 0 0 2 0 0 16 0 1765.6949 O75643 O75643 222 237 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2;3 3.5218E-236 281.99 By MS/MS By MS/MS 6 7 1977200000 1054800000 922450000 1190 1551 1342;1343 3130;3131;3132;3133;3134;3135;3136;3137;3138;3139;3140;3141;3142 3103;3104;3105;3106;3107;3108;3109;3110;3111;3112;3113;3114;3115;3116;3117;3118 3104 561 2938 15 EEATSPGAKDMPLSSDGNPK LNASPAAREEATSPGA LSSDGNPKVNEKTVGV R E E P K V 2 0 1 2 0 0 2 2 0 0 1 2 1 0 3 3 1 0 0 0 0 0 20 1 2029.9262 Q9UGU0 Q9UGU0 579 598 TCF20 Transcription factor 20 yes yes 3 0.0019449 75.743 By MS/MS By MS/MS 1 1 7978500 7978500 0 1191 3001 1344 3143;3144 3119;3120 3119 1191 6310;7899 2 EEATYGVWAERDSDDERPSFGGK RQRHWQTKEEATYGVW ERPSFGGKRARDYSAP K E E G K R 2 2 0 3 0 0 4 3 0 0 0 1 0 1 1 2 1 1 1 1 0 0 23 2 2600.1415 Q9UBB9;F6XM96;F6UKU9;F6SQZ1 Q9UBB9 47 69 TFIP11 Tuftelin-interacting protein 11 yes no 3 0.0069564 62.468 By MS/MS By MS/MS 1 1 114090000 57112000 56975000 1192 2988 1345 3145;3146 3121;3122 3122 6286 2 EEDEEPESPPEK KEKTPSPKEEDEEPES EPESPPEKKTSTSPPP K E E E K K 0 0 0 1 0 0 6 0 0 0 0 1 0 0 3 1 0 0 0 0 0 0 12 0 1413.5783 Q9H1E3 Q9H1E3 207 218 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 0.00028079 116.03 By MS/MS By MS/MS 2 1 31626000 18461000 13164000 1193 2816 1346 3147;3148;3149 3123;3124;3125;3126 3125 5891 4 EEDEEPESPPEKK KEKTPSPKEEDEEPES PESPPEKKTSTSPPPE K E E K K T 0 0 0 1 0 0 6 0 0 0 0 2 0 0 3 1 0 0 0 0 0 0 13 1 1541.6733 Q9H1E3 Q9H1E3 207 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 9.5899E-72 214.61 By MS/MS By MS/MS 2 2 96445000 52716000 43729000 1194 2816 1347 3150;3151;3152;3153 3127;3128;3129;3130;3131;3132;3133;3134 3128 5891 8 EEDEHPYELLLTAETK RIHGSAAREEDEHPYE LLLTAETKKVVLVDGK R E E T K K 1 0 0 1 0 0 5 0 1 0 3 1 0 0 1 0 2 0 1 0 0 0 16 0 1915.9051 Q92625 Q92625 449 464 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 3 7.2856E-05 111.81 By MS/MS By MS/MS 1 1 22866000 10078000 12788000 1195 2592 1348 3154;3155 3135;3136 3136 8409 2 EEDEPEERSGDETPGSEVPGDK EEQGLGKREEDEPEER GSEVPGDKAAEEQGDD R E E D K A 0 1 0 3 0 0 7 3 0 0 0 1 0 0 3 2 1 0 0 1 0 0 22 1 2386.9885 H3BQZ7;Q1KMD3 H3BQZ7 153 174 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 3 0.027855 47.499 By MS/MS By matching 1 1 219060000 101750000 117310000 1196 1244 1349 3156;3157 3137 3137 2320 1 EEDEQLQNLK NFLRILDKEEDEQLQN DEQLQNLKRRYTAYRQ K E E L K R 0 0 1 1 0 2 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1244.5885 A0A1B0GUG6;Q86WH2 A0A1B0GUG6 269 278 RASSF3 Ras association domain-containing protein 3 yes no 2 0.0017505 83.783 By MS/MS By MS/MS 1 1 5160100 3269900 1890300 1197 418 1350 3158;3159 3138;3139 3138 17 2 EEDGADASEEDLTR EEDVKDTREEDGADAS ASEEDLTRARQEEGAD R E E T R A 2 1 0 3 0 0 4 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 14 0 1535.6223 E5RHA3;Q86X53 E5RHA3 137 150 ERICH1 Glutamate-rich protein 1 yes no 2 0.0028273 85.576 By MS/MS By MS/MS 1 1 43143000 24804000 18339000 1198 780 1351 3160;3161 3140;3141 3141 1397 2 EEEEGISQESSEEEQ GRPKKLEKEEEEGISQ QESSEEEQ________ K E E E Q - 0 0 0 0 0 2 8 1 0 1 0 0 0 0 0 3 0 0 0 0 0 0 15 0 1737.6701 P17096 P17096 93 107 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2 0.011704 100.54 By MS/MS 1 0 0 0 1199 1712 1352 3162 3142 3142 3218;3219;3220 1 EEENADSDDEGELQDLLSQDWR TIKELQKKEEENADSD DLLSQDWRVKGALL__ K E E W R V 1 1 1 5 0 2 5 1 0 0 3 0 0 0 0 2 0 1 0 0 0 0 22 0 2592.0736 J3QQQ3;Q96NB3 J3QQQ3 79 100 ZNF830 Zinc finger protein 830 yes no 2 2.42E-125 219.61 By MS/MS By MS/MS 1 1 113170000 54290000 58881000 1200 1351 1353 3163;3164 3143;3144 3144 2496 2 EEENSEEELAAATTSK PSVPPTIKEEENSEEE LAAATTSKEQEPIGTD K E E S K E 3 0 1 0 0 0 6 0 0 0 1 1 0 0 0 2 2 0 0 0 0 0 16 0 1736.7588 P10244 P10244 237 252 MYBL2 Myb-related protein B yes yes 2 0.0021164 85.576 By MS/MS By MS/MS 1 1 10995000 6879200 4116000 1201 1672 1354 3165;3166 3145;3146 3145 3158 2 EEEQTAEEILSKGLSQMTTSADTDVDTSK EGVVVNGREEEQTAEE DTDVDTSKDKTESVTS R E E S K D 2 0 0 3 0 2 5 1 0 1 2 2 1 0 0 4 5 0 0 1 0 0 29 1 3142.4347 P35612 P35612 653 681 ADD2 Beta-adducin yes yes 3 0.020565 53.499 By MS/MS 1 0 0 0 1202 1800 1355 3167 3147 3147 682 3400 1 EEETSIDVAGKPNEVTK NEQKKESKEEETSIDV GKPNEVTKAAESPDQK K E E T K A 1 0 1 1 0 0 4 1 0 1 0 2 0 0 1 1 2 0 0 2 0 0 17 1 1844.9004 P53985 P53985 463 479 SLC16A1 Monocarboxylate transporter 1 yes yes 2 0.0089642 107.63 By MS/MS By MS/MS 1 1 30469000 16731000 13738000 1203 1899 1356 3168;3169 3148;3149 3148 3679;7489 2 EEEWDPEYTPK TTFQKRPKEEEWDPEY WDPEYTPKSKKYFLHD K E E P K S 0 0 0 1 0 0 4 0 0 0 0 1 0 0 2 0 1 1 1 0 0 0 11 0 1421.5987 Q9Y2W1;Q9NYF8;H0YF14 Q9NYF8 832 842 THRAP3;BCLAF1 Thyroid hormone receptor-associated protein 3;Bcl-2-associated transcription factor 1 no no 2 0.00021992 120.31 By MS/MS By MS/MS 1 1 29654000 16145000 13509000 1204 2947;3096 1357 3170;3171 3150;3151 3150 7887;7942 2 EEEYEPEKMEAEDYVMAVVDK EDKAEDAREEEYEPEK YVMAVVDKAAEAGGAE R E E D K A 2 0 0 2 0 0 7 0 0 0 0 2 2 0 1 0 0 0 2 3 0 0 21 1 2532.0924 P46821 P46821 1031 1051 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 7.6739E-08 130.47 By MS/MS By MS/MS 1 1 30206000 13274000 16932000 1205 1840 1358 3172;3173 3152;3153;3154 3153 706;707 8269 3 EEGELEDGEISDDDNNSQIR ASSGLSPKEEGELEDG DDNNSQIRSRSSSSSS K E E I R S 0 1 2 4 0 1 5 2 0 2 1 0 0 0 0 2 0 0 0 0 0 0 20 0 2262.936 O60293;G3V1X1 O60293 18 37 ZFC3H1 Zinc finger C3H1 domain-containing protein yes no 2 0.0015483 78.674 By MS/MS By MS/MS 1 1 18198000 8642400 9556000 1206 1515 1359 3174;3175 3155;3156 3155 2858 2 EEGSDIEDEDMEELLNDTR KMNEKRKREEGSDIED EELLNDTRLLKKLKKG R E E T R L 0 1 1 4 0 0 6 1 0 1 2 0 1 0 0 1 1 0 0 0 0 0 19 0 2237.9118 F5H5U2;Q8NHQ9 F5H5U2 510 528 DDX55 ATP-dependent RNA helicase DDX55 yes no 2 8.7214E-11 139.46 By MS/MS By MS/MS 1 1 39037000 18596000 20441000 1207 979 1360 3176;3177 3157;3158;3159 3157 358 1833 3 EEGSLSDTEADAVSGQLPDPTTNPSAGK KKYTLENKEEGSLSDT TTNPSAGKDGPSLLVV K E E G K D 3 0 1 3 0 1 3 3 0 0 2 1 0 0 3 4 3 0 0 1 0 0 28 0 2772.2574 Q8N1G4 Q8N1G4 515 542 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 3 0.0071502 49.281 By MS/MS 1 14994000 0 14994000 1208 2460 1361 3178 3160 3160 5033 1 EEKESEDKPEIEDVGSDEEEEK DKEEEKEKEEKESEDK GSDEEEEKKDGDKKKK K E E E K K 0 0 0 3 0 0 10 1 0 1 0 3 0 0 1 2 0 0 0 1 0 0 22 2 2578.093 P07900 P07900 248 269 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 3 0.00030836 107.36 By MS/MS By MS/MS 1 1 54666000 28857000 25810000 1209 1656 1362 3179;3180 3161;3162 3162 3123 2 EELDEDDIISDPDSHFPAWR KPEASLVKEELDEDDI DSHFPAWRESQNSLDE K E E W R E 1 1 0 5 0 0 3 0 1 2 1 0 0 1 2 2 0 1 0 0 0 0 20 0 2385.0397 Q8IXW5 Q8IXW5 405 424 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 3 6.915E-05 95.073 By MS/MS By MS/MS 1 1 15585000 8076100 7508800 1210 2436 1363 3181;3182 3163;3164;3165 3164 4981 3 EELMSSDLEETAGSTSIPK KKKKSFSKEELMSSDL AGSTSIPKRKKSTPKE K E E P K R 1 0 0 1 0 0 4 1 0 1 2 1 1 0 1 4 2 0 0 0 0 0 19 0 2022.9303 O00567 O00567 515 533 NOP56 Nucleolar protein 56 yes yes 2;3 5.9424E-24 159.12 By MS/MS By MS/MS 4 4 159780000 82623000 77158000 1211 1443 1364;1365;1366 3183;3184;3185;3186;3187;3188;3189;3190 3166;3167;3168;3169;3170;3171;3172;3173 3166 510 2649;2650;7285 8 EELQANGSAPAADKEEPAAAGSGAASPSAAEK AAAESGAKEELQANGS ASPSAAEKGEPAAAAA K E E E K G 11 0 1 1 0 1 5 3 0 0 1 2 0 0 3 4 0 0 0 0 0 0 32 1 2981.385 P29966 P29966 56 87 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.0024049 52.814 By MS/MS By MS/MS 2 3 97545000 51808000 45737000 1212 1776 1367;1368 3191;3192;3193;3194;3195 3174;3175;3176 3175 3352;3353;3354 3 EELSHSPEPCTK PKTFLESKEELSHSPE HSPEPCTKMTMRLRRN K E E T K M 0 0 0 0 1 0 3 0 1 0 1 1 0 0 2 2 1 0 0 0 0 0 12 0 1412.6242 P41229 P41229 296 307 KDM5C Lysine-specific demethylase 5C yes yes 2 0.02303 63.602 By MS/MS By MS/MS 1 1 11058000 5970300 5087400 1213 1820 1369 3196;3197 3177;3178 3177 3427;3428 2 EELVSQGIMPPLKSPAAFHEQR KLQQRRTREELVSQGI PAAFHEQRRSLERART R E E Q R R 2 1 0 0 0 2 3 1 1 1 2 1 1 1 3 2 0 0 0 1 0 0 22 1 2463.258 W0Z7M9;B0QY74 W0Z7M9 28 49 mkl1;MKL1 Phosphatase and actin regulator yes no 3 0.012276 53.554 By MS/MS By MS/MS 1 1 10677000 4568100 6108700 1214 3229 1370 3198;3199 3179;3180;3181 3179 1266 6827 3 EELYQNLTREQADYCVSHMK EGKPYVTKEELYQNLT DYCVSHMKPYVDGKGR K E E M K P 1 1 1 1 1 2 3 0 1 0 2 1 1 0 0 1 1 0 2 1 0 0 20 1 2513.1315 A0A0D9SF54;A0A0D9SGF6;Q13813 A0A0D9SF54 2412 2431 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 3 0.011838 59.434 By matching By MS/MS 1 1 21413000 10599000 10814000 1215 341 1371 3200;3201 3182 3182 601;8026 0 EENPESDGEPVVEDGTSVK PQAEVFTKEENPESDG VEDGTSVKTLETLQQR K E E V K T 0 0 1 2 0 0 5 2 0 0 0 1 0 0 2 2 1 0 0 3 0 0 19 0 2015.8807 Q13439;E7EVX2;H0Y6I0;A0A087WTW2 Q13439 261 279 GOLGA4 Golgin subfamily A member 4 yes no 2 0.002321 77.631 By MS/MS By matching 1 1 37251000 20014000 17237000 1216 2060 1372 3202;3203 3183 3183 4060 1 EEPGSSREQPGSLSQTRHSR FLGIKSKREEPGSSRE LSQTRHSRPAQALPKD R E E S R P 0 3 0 0 0 2 3 2 1 0 1 0 0 0 2 5 1 0 0 0 0 0 20 2 2224.0581 Q7Z442 Q7Z442 2432 2451 PKD1L2 Polycystic kidney disease protein 1-like 2 yes yes 3 0.014794 63.893 By MS/MS 1 0 0 0 1217 2383 1373 3204 3184 3184 4841;4842;4843 1 EEPLSEEEPCTSTAIASPEK RGKKKHIKEEPLSEEE TAIASPEKKKKKKKKR K E E E K K 2 0 0 0 1 0 6 0 0 1 1 1 0 0 3 3 2 0 0 0 0 0 20 0 2202.9838 Q9Y2X3 Q9Y2X3 498 517 NOP58 Nucleolar protein 58 yes yes 2 0.00089518 79.341 By MS/MS 1 7750800 0 7750800 1218 3098 1374 3205 3185 3185 6656;6657;6658 1 EEPLSEEEPCTSTAIASPEKK RGKKKHIKEEPLSEEE AIASPEKKKKKKKKRE K E E K K K 2 0 0 0 1 0 6 0 0 1 1 2 0 0 3 3 2 0 0 0 0 0 21 1 2331.0788 Q9Y2X3 Q9Y2X3 498 518 NOP58 Nucleolar protein 58 yes yes 3 0.0013153 74.324 By MS/MS By MS/MS 1 1 28756000 12340000 16416000 1219 3098 1375 3206;3207 3186;3187 3187 6656;6657;6658 2 EEPSQNDISPK KSKKAKKKEEPSQNDI SQNDISPKTKSLRKKK K E E P K T 0 0 1 1 0 1 2 0 0 1 0 1 0 0 2 2 0 0 0 0 0 0 11 0 1242.5728 Q9NR30 Q9NR30 81 91 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.011671 89.189 By matching By MS/MS 1 1 30274000 14545000 15729000 1220 2905 1376 3208;3209 3188 3188 6118 0 EEPVIAEDEDCPMSLVTTANHSPELEDDR HIHSIHVKEEPVIAED SPELEDDREIEEEPLS K E E D R E 2 1 1 4 1 0 6 0 1 1 2 0 1 0 3 2 2 0 0 2 0 0 29 0 3297.4289 A8MUV4;A0A0U1RQR8;A0A0U1RQY3;A0A0U1RQM2;O15409;Q0PRL4 A8MUV4 654 682 FOXP2 Forkhead box protein P2 yes no 3 0.0010448 58.812 By MS/MS By MS/MS 1 1 13050000 5958200 7092100 1221 385 1377 3210;3211 3189;3190;3191 3190 708 3 EEPVSSGPEEAVGK KKKRKFSKEEPVSSGP GPEEAVGKSSSKKKKK K E E G K S 1 0 0 0 0 0 4 2 0 0 0 1 0 0 2 2 0 0 0 2 0 0 14 0 1413.6624 O00567 O00567 565 578 NOP56 Nucleolar protein 56 yes yes 2 1.1357E-07 134.06 By MS/MS By MS/MS 2 2 75082000 34857000 40225000 1222 1443 1378;1379 3212;3213;3214;3215 3192;3193;3194;3195;3196 3194 2651;2652 5 EEQEYEEEVEEEPRPAAK RVTEGTIREEQEYEEE EEPRPAAKVVEREEAV R E E A K V 2 1 0 0 0 1 9 0 0 0 0 1 0 0 2 0 0 0 1 1 0 0 18 1 2189.9601 O43491;E9PK52;E9PHY5;H0Y5B0;E9PMV8;Q6R5J7 O43491 769 786 EPB41L2 Band 4.1-like protein 2 yes no 2;3 3.6645E-43 174.59 By MS/MS By MS/MS 2 2 82116000 44961000 37155000 1223 1502 1380 3216;3217;3218;3219 3197;3198;3199;3200;3201 3198 8199 5 EERSPQTLAPVGEDAMK AAGGLTLKEERSPQTL PVGEDAMKTPSPAAED K E E M K T 2 1 0 1 0 1 3 1 0 0 1 1 1 0 2 1 1 0 0 1 0 0 17 1 1856.8938 Q92797 Q92797 1240 1256 SYMPK Symplekin yes yes 2;3 0.0019476 89.669 By MS/MS By MS/MS 2 2 38732000 22235000 16497000 1224 2603 1381 3220;3221;3222;3223 3202;3203 3203 1041 5344 2 EESAEELQAAEHPDEVEDPK ESDSESEKEESAEELQ PDEVEDPKNKKDAKSN K E E P K N 3 0 0 2 0 1 7 0 1 0 1 1 0 0 2 1 0 0 0 1 0 0 20 0 2250.9764 O00193 O00193 145 164 SMAP Small acidic protein yes yes 2;3 0.00091722 70.335 By MS/MS By MS/MS 2 2 56157000 28033000 28124000 1225 1428 1382 3224;3225;3226;3227 3204;3205;3206;3207 3207 2624 4 EESDGEYDEFGRK ENVEYIEREESDGEYD EYDEFGRKKKKYRGKA R E E R K K 0 1 0 2 0 0 4 2 0 0 0 1 0 1 0 1 0 0 1 0 0 0 13 1 1559.6376 O95218 O95218 118 130 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.01157 74.78 By MS/MS By matching 1 1 14331000 5745700 8584800 1226 1582 1383 3228;3229 3208 3208 2995 1 EESEEEEDEDDEEEEEEEKEK EPEMPGPREESEEEED EEEEEKEKSLIVEGKR R E E E K S 0 0 0 3 0 0 15 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 21 1 2641.9522 B4DFG0;P35659;D6R9L5 B4DFG0 30 50 DEK Protein DEK yes no 2 1.3979E-29 145.48 By MS/MS 1 0 0 0 1227 548 1384 3230 3209 3209 1024 1 EESEESEAEPVQR SVSRKQAREESEESEA SEAEPVQRTAKKVEGN R E E Q R T 1 1 0 0 0 1 6 0 0 0 0 0 0 0 1 2 0 0 0 1 0 0 13 0 1517.6482 Q9BW71 Q9BW71 194 206 HIRIP3 HIRA-interacting protein 3 yes yes 2 2.9492E-15 161.87 By MS/MS By MS/MS 2 4 117740000 39618000 78127000 1228 2760 1385;1386 3231;3232;3233;3234;3235;3236 3210;3211;3212;3213;3214;3215;3216;3217;3218 3210 5743;5744 9 EESLVEELSPASEK SEKEINAREESLVEEL ELSPASEKKPVPPSEG R E E E K K 1 0 0 0 0 0 5 0 0 0 2 1 0 0 1 3 0 0 0 1 0 0 14 0 1545.741 A0A087WTL4;A0A087WX97;Q9BXK5 A0A087WTL4 394 407 BCL2L13 Bcl-2-like protein 13 yes no 2 0.0043492 81.128 By MS/MS By matching 1 1 17871000 8210400 9660200 1229 36 1387 3237;3238 3219 3219 66 0 EESPQSKAETELK ECSKIEVKEESPQSKA SKAETELKASQKPIRK K E E L K A 1 0 0 0 0 1 4 0 0 0 1 2 0 0 1 2 1 0 0 0 0 0 13 1 1474.7151 P11171 P11171 186 198 EPB41 Protein 4.1 yes yes 2 0.012681 93.716 By matching By MS/MS 1 1 26495000 14740000 11755000 1230 1681 1388 3239;3240 3220 3220 3165;3166 1 EESSEDENEVSNILR DSRVQRPKEESSEDEN NEVSNILRSGRSKQFY K E E L R S 0 1 2 1 0 0 5 0 0 1 1 0 0 0 0 3 0 0 0 1 0 0 15 0 1748.7701 Q01804 Q01804 1021 1035 OTUD4 OTU domain-containing protein 4 yes yes 2 0.0022928 80.69 By MS/MS By MS/MS 1 1 18978000 9898000 9080300 1231 1982 1389 3241;3242 3221;3222 3222 3804;3805 2 EETYDVPPAFAK VPDGPLLREETYDVPP DVPPAFAKAKPFDPAR R E E A K A 2 0 0 1 0 0 2 0 0 0 0 1 0 1 2 0 1 0 1 1 0 0 12 0 1365.6452 P56945;H3BN62 P56945 324 335 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 2 0.0076115 72.325 By matching By MS/MS 1 1 12191000 6445800 5744700 1232 1919 1390 3243;3244 3223 3223 8303 0 EEVEAPLSAQESEMLYK GECNIASKEEVEAPLS QESEMLYKKFSLKFVS K E E Y K K 2 0 0 0 0 1 5 0 0 0 2 1 1 0 1 2 0 0 1 1 0 0 17 0 1951.9085 A0A0U1RQJ2 A0A0U1RQJ2 379 395 yes yes 2 2.4941E-07 132.86 By MS/MS By MS/MS 2 2 40946000 23608000 17338000 1233 382 1391;1392 3245;3246;3247;3248 3224;3225;3226 3225 151 8038 2 EEVVAHPGPEEQDSLLQRK GAGAGGPREEVVAHPG QDSLLQRKSARRCVKQ R E E R K S 1 1 0 1 0 2 4 1 1 0 2 1 0 0 2 1 0 0 0 2 0 0 19 1 2160.0811 Q9UMN6 Q9UMN6 1056 1074 KMT2B Histone-lysine N-methyltransferase 2B yes yes 3 0.023694 42.708 By MS/MS By matching 1 1 54765000 32075000 22690000 1234 3054 1393 3249;3250 3227 3227 1 EEVVGGDDSDGLR EVILVQTREEVVGGDD GDDSDGLRAEDGFEDQ R E E L R A 0 1 0 3 0 0 2 3 0 0 1 0 0 0 0 1 0 0 0 2 0 0 13 0 1346.595 P25490 P25490 110 122 YY1 Transcriptional repressor protein YY1 yes yes 2 0.0042582 82.529 By matching By MS/MS 1 1 93146000 47841000 45305000 1235 1763 1394 3251;3252 3228 3228 3329 1 EFAGEDTSDLFLEER RDFLVQIKEFAGEDTS SDLFLEEREIALRQAD K E F E R E 1 1 0 2 0 0 4 1 0 0 2 0 0 2 0 1 1 0 0 0 0 0 15 0 1756.7792 O14980 O14980 1024 1038 XPO1 Exportin-1 yes yes 2 0.018686 84.046 By MS/MS 1 6871500 6871500 0 1236 1465 1395 3253 3229 3229 2723 0 EFAPSDEELDSYR RYVMIFKKEFAPSDEE DEELDSYRRGEEWDPQ K E F Y R R 1 1 0 2 0 0 3 0 0 0 1 0 0 1 1 2 0 0 1 0 0 0 13 0 1556.6631 I3L0X5;I3L4C3;O75391 I3L0X5 59 71 SPAG7 Sperm-associated antigen 7 yes no 2 0.003574 84.173 By MS/MS By MS/MS 1 1 24968000 13625000 11343000 1237 1302 1396 3254;3255 3230;3231 3230 2418 2 EFDELNPSAQR TSKAFTGREFDELNPS ELNPSAQRDACLNARC R E F Q R D 1 1 1 1 0 1 2 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 11 0 1304.5997 P16615;H7C5W9 P16615 656 666 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 2 2.0184E-05 125.03 By MS/MS By MS/MS 1 1 25325000 14410000 10916000 1238 1710 1397 3256;3257 3232;3233 3232 3214 2 EFDGKSLVSVTK EYCVQQLKEFDGKSLV KSLVSVTKEGLELPED K E F T K E 0 0 0 1 0 0 1 1 0 0 1 2 0 1 0 2 1 0 0 2 0 0 12 1 1308.6925 P08238;Q58FF8;Q58FF7 P08238 527 538 HSP90AB1;HSP90AB2P;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Putative heat shock protein HSP 90-beta-3 yes no 2 0.0006013 115.06 By MS/MS By MS/MS 1 1 14688000 8128600 6559900 1239 1658 1398 3258;3259 3234;3235 3234 3125 2 EFFVDSVSQFNNSSFEK ASQYPEVKEFFVDSVS FNNSSFEKGEQRTRKK K E F E K G 0 0 2 1 0 1 2 0 0 0 0 1 0 4 0 4 0 0 0 2 0 0 17 0 2009.9007 H7BXQ9;Q5T890 H7BXQ9 244 260 ERCC6L2 DNA excision repair protein ERCC-6-like 2 yes no 3 0.0051449 62.648 By MS/MS By matching 1 1 59442000 34842000 24600000 1240 1258 1399 3260;3261 3236 3236 55 2338;2339 1 EFGYDSPHDLDSD KYPLDVQKEFGYDSPH SPHDLDSD________ K E F S D - 0 0 0 4 0 0 1 1 1 0 1 0 0 1 1 2 0 0 1 0 0 0 13 0 1495.5739 Q96CW6 Q96CW6 297 309 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS yes yes 2 0.00011236 120.6 By MS/MS By MS/MS 2 2 32004000 14474000 17530000 1241 2632 1400;1401 3262;3263;3264;3265 3237;3238;3239;3240 3240 5408;5409;8420 4 EFITGDVEPTDAESEWHSENEEEEK QPLFDKRREFITGDVE SENEEEEKLAGDMKSK R E F E K L 1 0 1 2 0 0 9 1 1 1 0 1 0 1 1 2 2 1 0 1 0 0 25 0 2935.2156 E9PNJ7;A8MXH2;C9J6D1;Q99733;E9PS34;E9PKT8;C9JZI7 E9PNJ7 108 132 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 2;3;4 5.6718E-08 123.76 By MS/MS By MS/MS 3 3 2325300000 1682900000 642450000 1242 502 1402 3266;3267;3268;3269;3270;3271 3241;3242;3243;3244;3245;3246;3247 3241 914;915 7 EFITGDVEPTDAESEWHSENEEEEKLAGDMK QPLFDKRREFITGDVE EKLAGDMKSK______ R E F M K S 2 0 1 3 0 0 9 2 1 1 1 2 1 1 1 2 2 1 0 1 0 0 31 1 3550.5206 E9PNJ7;A8MXH2;C9J6D1;Q99733;E9PKT8;C9JZI7 E9PNJ7 108 138 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 3;4 2.4217E-07 84.214 By MS/MS By MS/MS 3 3 445530000 199670000 245860000 1243 502 1403;1404 3272;3273;3274;3275;3276;3277 3248;3249;3250;3251;3252 3249 199 914;915 5 EFTGSPPSSATKK VESLPGGREFTGSPPS PPSSATKKDSFFSNIS R E F K K D 1 0 0 0 0 0 1 1 0 0 0 2 0 1 2 3 2 0 0 0 0 0 13 1 1335.667 C9J3F6;Q92609 C9J3F6 524 536 TBC1D5 TBC1 domain family member 5 yes no 2 0.012651 64.827 By MS/MS By matching 1 1 4030500 2517500 1513000 1244 631 1405 3278;3279 3253 3253 7012 0 EFVSISSPAHVAT EMAKNILREFVSISSP SSPAHVAT________ R E F A T - 2 0 0 0 0 0 1 0 1 1 0 0 0 1 1 3 1 0 0 2 0 0 13 0 1343.6721 P22681;A0A0U1RR39 P22681 894 906 CBL E3 ubiquitin-protein ligase CBL yes no 2 0.00010477 122.7 By MS/MS By matching 1 1 13052000 7142100 5909900 1245 1751 1406 3280;3281 3254 3254 3300 1 EGAASPAPETPQPTSPETSPK HDDRWETKEGAASPAP TSPETSPKETPMQPPE K E G P K E 3 0 0 0 0 1 3 1 0 0 0 1 0 0 6 3 3 0 0 0 0 0 21 0 2077.9804 Q9Y3X0 Q9Y3X0 372 392 CCDC9 Coiled-coil domain-containing protein 9 yes yes 2 0.00088213 109.28 By MS/MS By MS/MS 1 2 36913000 12240000 24673000 1246 3113 1407;1408 3282;3283;3284 3255;3256;3257 3255 6674;7947;7948 3 EGALCEENMR AGFQWATKEGALCEEN ALCEENMRGVRFDVHD K E G M R G 1 1 1 0 1 0 3 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 10 0 1207.4962 P13639 P13639 689 698 EEF2 Elongation factor 2 yes yes 2 0.01836 78.264 By MS/MS By matching 1 1 8019600 4656100 3363500 1247 1693 1409 3285;3286 3258 3258 630 1 EGDELEDNGKNFYESDDDQKEK TQFVSPWKEGDELEDN SDDDQKEKTDKKKKPY K E G E K T 0 0 2 5 0 1 5 2 0 0 1 3 0 1 0 1 0 0 1 0 0 0 22 2 2603.0783 O00203 O00203 262 283 AP3B1 AP-3 complex subunit beta-1 yes yes 3 0.00028235 88.471 By MS/MS By matching 1 1 77094000 37927000 39167000 1248 1429 1410 3287;3288 3259 3259 2625 1 EGDPGIMYLTTVELYRR KTHTMLGREGDPGIMY TTVELYRRLEARQQEK R E G R R L 0 2 0 1 0 0 2 2 0 1 2 0 1 0 1 0 2 0 2 1 0 0 17 1 2012.0037 A0A0C4DGP2;A0A0C4DGP5;Q86Y91 A0A0C4DGP2 123 139 KIF18B Kinesin-like protein;Kinesin-like protein KIF18B yes no 2 0.024453 46.592 By matching By MS/MS 1 1 20119000 9541000 10578000 1249 323 1411 3289;3290 3260 3260 126 0 EGDPVSLSTPLETEFGSPSELSPR SAVSQELREGDPVSLS SPSELSPRIEEQELSE R E G P R I 0 1 0 1 0 0 4 2 0 0 3 0 0 1 4 5 2 0 0 1 0 0 24 0 2530.2075 E9PMG4;Q9BUR4;E9PMR3 E9PMG4 69 92 WRAP53 Telomerase Cajal body protein 1 yes no 2;3 1.0278E-37 171.78 By MS/MS By MS/MS 3 4 107270000 52429000 54844000 1250 913 1412;1413 3291;3292;3293;3294;3295;3296;3297 3261;3262;3263;3264;3265;3266 3265 1693;1694;1695 6 EGDVLTLLESER RNVKGPVREGDVLTLL LTLLESEREARRLR__ R E G E R E 0 1 0 1 0 0 3 1 0 0 3 0 0 0 0 1 1 0 0 1 0 0 12 0 1359.6882 P62857 P62857 52 63 RPS28 40S ribosomal protein S28 yes yes 2 1.6142E-101 228.98 By MS/MS By MS/MS 1 1 32555000 15864000 16691000 1251 1947 1414 3298;3299 3267;3268 3267 2 EGEAAGGDHETESTSDKETDIDDR EAVSPPHREGEAAGGD KETDIDDRYGDLDSRT R E G D R Y 2 1 0 5 0 0 5 3 1 1 0 1 0 0 0 2 3 0 0 0 0 0 24 1 2563.043 Q92903 Q92903 23 46 CDS1 Phosphatidate cytidylyltransferase 1 yes yes 3 0.015461 49.559 By matching By MS/MS 1 1 44625000 27350000 17275000 1252 2608 1415 3300;3301 3269 3269 5359;7766 1 EGEEPTVYSDEEEPK HHVGKLLKEGEEPTVY YSDEEEPKDESARKND K E G P K D 0 0 0 1 0 0 6 1 0 0 0 1 0 0 2 1 1 0 1 1 0 0 15 0 1736.7265 O00264 O00264 173 187 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2 6.8973E-27 169.98 By MS/MS By MS/MS 1 1 296500000 140780000 155720000 1253 1430 1416 3302;3303 3270;3271;3272 3270 2626;7282;8175 3 EGEEPTVYSDEEEPKDESAR HHVGKLLKEGEEPTVY EPKDESARKND_____ K E G A R K 1 1 0 2 0 0 7 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 20 1 2294.9663 O00264 O00264 173 192 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2;3 1.0607E-07 133.41 By MS/MS By MS/MS 2 2 8392000000 4606100000 3785800000 1254 1430 1417 3304;3305;3306;3307 3273;3274;3275;3276;3277;3278;3279;3280;3281 3280 2626;7282;8175 9 EGEEPTVYSDEEEPKDESARK HHVGKLLKEGEEPTVY PKDESARKND______ K E G R K N 1 1 0 2 0 0 7 1 0 0 0 2 0 0 2 2 1 0 1 1 0 0 21 2 2423.0612 O00264 O00264 173 193 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2;3;4 3.441E-05 104.16 By MS/MS By MS/MS 2 3 692300000 331010000 361290000 1255 1430 1418 3308;3309;3310;3311;3312 3282;3283;3284;3285 3282 2626;7282;8175 4 EGESLEDLMK EALIALLREGESLEDL ESLEDLMKLSPEELLL R E G M K L 0 0 0 1 0 0 3 1 0 0 2 1 1 0 0 1 0 0 0 0 0 0 10 0 1149.5224 P13796 P13796 254 263 LCP1 Plastin-2 yes yes 2 0.0032633 93.839 By MS/MS 1 2178800 2178800 0 1256 1695 1419 3313 3286 3286 3194 1 EGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDK PSQGEVEREGESPAAG ETEDGSDKVQPPPETP R E G D K V 3 0 0 2 0 1 10 3 0 0 3 1 0 0 7 3 2 0 0 1 0 0 36 0 3759.701 C9JFV4;Q8IZL8;E7EV54 C9JFV4 1090 1125 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 3;4 1.1988E-09 82.012 By MS/MS By MS/MS 2 2 190800000 112000000 78809000 1257 662 1420 3314;3315;3316;3317 3287;3288;3289;3290 3288 1228 4 EGETQGVAFEHESPADFQNSQSPVQDQDK EFEHSETREGETQGVA SPVQDQDKSQLSGREE R E G D K S 2 0 1 3 0 5 4 2 1 0 0 1 0 2 2 3 1 0 0 2 0 0 29 0 3203.3916 E9PGM9;P78332;F8WCA5 E9PGM9 209 237 RBM6 RNA-binding protein 6 yes no 3 7.7742E-10 104.55 By matching By MS/MS 1 1 87851000 35621000 52229000 1258 874 1421 3318;3319 3291 3291 1617;7110 1 EGETQGVAFEHESPADFQNSQSPVQDQDKSQLSGR EFEHSETREGETQGVA DKSQLSGREEQSSDAG R E G G R E 2 1 1 3 0 6 4 3 1 0 1 1 0 2 2 5 1 0 0 2 0 0 35 1 3831.7208 E9PGM9;P78332;F8WCA5 E9PGM9 209 243 RBM6 RNA-binding protein 6 yes no 4 0.014015 40.295 By MS/MS By MS/MS 1 1 66948000 27756000 39193000 1259 874 1422 3320;3321 3292;3293 3292 1617;7110 2 EGFESDTDSEFTFK DITLRGGREGFESDTD TDSEFTFKMQDYNKDD R E G F K M 0 0 0 2 0 0 3 1 0 0 0 1 0 3 0 2 2 0 0 0 0 0 14 0 1637.6733 E9PMS6;E9PMP7;F8WD26;J3KP06;Q8WWI1 E9PMS6 181 194 LMO7 LIM domain only protein 7 yes no 2 0.001197 103.13 By MS/MS By MS/MS 1 1 8662800 4475200 4187600 1260 915 1423 3322;3323 3294;3295 3294 1702 2 EGFGLSENPFASLSPDEQKDEK SGASTNRKEGFGLSEN PDEQKDEKKLLEGIVK K E G E K K 1 0 1 2 0 1 4 2 0 0 2 2 0 2 2 3 0 0 0 0 0 0 22 1 2423.1129 B4DT96;C9JYA1;O15504 B4DT96 93 114 NUPL2 Nucleoporin-like protein 2 yes no 3 6.1871E-05 103.59 By MS/MS By MS/MS 1 1 24436000 12700000 11736000 1261 561 1424 3324;3325 3296;3297;3298 3298 1037;1038 3 EGHSLEMENENLVENGADSDEDDNSFLK GETGKRSKEGHSLEME EDDNSFLKQQSPQEPK K E G L K Q 1 0 4 4 0 0 6 2 1 0 3 1 1 1 0 3 0 0 0 1 0 0 28 0 3136.3051 Q9UHB6;F8VS07;F8VQE1 Q9UHB6 668 695 LIMA1 LIM domain and actin-binding protein 1 yes no 3 3.9301E-11 120.23 By MS/MS By MS/MS 1 1 32995000 15084000 17912000 1262 3003 1425 3326;3327 3299;3300;3301 3301 6319 3 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK YRELLAKKEGITGPPA GSPTAAGKKTEKEEST K E G G K K 5 0 0 5 1 0 1 5 0 3 1 2 0 1 5 5 3 0 0 0 0 0 37 1 3601.673 H0YA91;E9PDE4;E7ES10;E7EVY3;B7Z574;A0A0C4DGB5;P20810 H0YA91 230 266 CAST Calpastatin yes no 3 1.771E-05 65.349 By MS/MS By MS/MS 1 1 76788000 36890000 39898000 1263 313 1426 3328;3329 3302;3303 3302 548 1 EGLELPEDEEEK KSLVSVTKEGLELPED LPEDEEEKKKMEESKA K E G E K K 0 0 0 1 0 0 6 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 12 0 1415.6304 P07900;Q58FG0;P08238;Q58FF7;Q58FF6 P08238 539 550 HSP90AA1;HSP90AA5P;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 no no 2 0.0069783 84.817 By MS/MS By MS/MS 1 1 41046000 19404000 21641000 1264 1658;1656;2209 1427 3330;3331 3304;3305 3305 2 EGLRPGDTTSTFCGTPNYIAPEILR LTDYGMCKEGLRPGDT YIAPEILRGEDYGFSV K E G L R G 1 2 1 1 1 0 2 3 0 2 2 0 0 1 3 1 4 0 1 0 0 0 25 1 2764.349 P41743 P41743 402 426 PRKCI Protein kinase C iota type yes yes 3 0.0005823 69.088 By MS/MS By MS/MS 1 1 169290000 83238000 86049000 1265 1822 1428 3332;3333 3306;3307 3307 3432;7441 2 EGMNIVEAMER HVVFGKVKEGMNIVEA NIVEAMERFGSRNGKT K E G E R F 1 1 1 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 0 11 0 1277.5744 P62937 P62937 134 144 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 3.3919E-09 156.16 By MS/MS By MS/MS 4 5 70313000 27136000 43176000 1266 1950 1429;1430 3334;3335;3336;3337;3338;3339;3340;3341;3342 3308;3309;3310;3311;3312;3313;3314 3314 764;765 7 EGNTTEDDFPSSPGNGNK TSGSGFHREGNTTEDD SSPGNGNKSSNSSEER R E G N K S 0 0 3 2 0 0 2 3 0 0 0 1 0 1 2 2 2 0 0 0 0 0 18 0 1864.7711 Q15007 Q15007 295 312 WTAP Pre-mRNA-splicing regulator WTAP yes yes 2 1.3735E-93 218.64 By MS/MS By MS/MS 2 2 175680000 93536000 82146000 1267 2115 1431;1432 3343;3344;3345;3346 3315;3316;3317 3315 104 4181 3 EGPEPPEEVPPPTTPPVPK VEPQLPSKEGPEPPEE PTTPPVPKVEPKGDGI K E G P K V 0 0 0 0 0 0 4 1 0 0 0 1 0 0 9 0 2 0 0 2 0 0 19 0 1993.0044 P48634 P48634 597 615 PRRC2A Protein PRRC2A yes yes 2;3 1.3702E-101 209.67 By MS/MS By MS/MS 2 2 138490000 72027000 66462000 1268 1846 1433 3347;3348;3349;3350 3318;3319;3320;3321;3322;3323;3324 3323 7458;7459 7 EGPGSEPDSQVDGGLSGASLGEK FSERRERREGPGSEPD SGASLGEKKELAKRSF R E G E K K 1 0 0 2 0 1 3 6 0 0 2 1 0 0 2 4 0 0 0 1 0 0 23 0 2171.9818 Q5JSZ5;H0Y412 Q5JSZ5 1391 1413 PRRC2B Protein PRRC2B yes no 2 0.009502 59.618 By MS/MS By MS/MS 1 1 24338000 12547000 11791000 1269 2220 1434 3351;3352 3325;3326;3327 3326 4440 3 EGPLGWSSDGSLGSVLLDSPSSPR TLPELSCKEGPLGWSS LDSPSSPRVRLPCQPL K E G P R V 0 1 0 2 0 0 1 4 0 0 4 0 0 0 3 7 0 1 0 1 0 0 24 0 2399.1605 C9JRJ5;Q9UGP4 C9JRJ5 403 426 LIMD1 LIM domain-containing protein 1 yes no 2;3 1.1443E-36 168.45 By MS/MS By MS/MS 2 2 68227000 43035000 25192000 1270 689 1435 3353;3354;3355;3356 3328;3329;3330;3331 3328 1270;1271 4 EGPSCPSPGPFCR PQPDEVQREGPSCPSP PSPGPFCREELMVKSS R E G C R E 0 1 0 0 2 0 1 2 0 0 0 0 0 1 4 2 0 0 0 0 0 0 13 0 1446.602 Q4AC94 Q4AC94 2108 2120 C2CD3 C2 domain-containing protein 3 yes yes 2 0.0075602 76.868 By MS/MS By matching 1 1 10787000 5347000 5440500 1271 2191 1436 3357;3358 3332 3332 4365 1 EGQGYSFVSR RRPKDSEREGQGYSFV QGYSFVSRGEMEADVR R E G S R G 0 1 0 0 0 1 1 2 0 0 0 0 0 1 0 2 0 0 1 1 0 0 10 0 1128.52 B4DZ84;D3DX48;A0A0A0MRU0;A0A0D9SFF8;D3DX49;A0A0C4DH75;Q14168 B4DZ84 384 393 MPP2 MAGUK p55 subfamily member 2 yes no 2 0.020252 64.64 By MS/MS By matching 1 1 6202800 2126700 4076200 1272 232 1437 3359;3360 3333 3333 408 1 EGSAFEDDDMLVSTTTSNLLLESEQSTSNLNEK MDDREIMREGSAFEDD STSNLNEKINHLEYED R E G E K I 1 0 3 3 0 1 5 1 0 0 5 1 1 1 0 6 4 0 0 1 0 0 33 0 3603.6258 E5RFV8;E5RIN7;O60216 E5RFV8 173 205 RAD21 Double-strand-break repair protein rad21 homolog yes no 3 0.009768 45.22 By matching By MS/MS 1 1 22866000 13991000 8874100 1273 777 1438 3361;3362 3334 3334 291 1393;1394;7059;7060;7061 1 EGSCIFPEELSPK MFGERHLKEGSCIFPE FPEELSPKRMDTEMED K E G P K R 0 0 0 0 1 0 3 1 0 1 1 1 0 1 2 2 0 0 0 0 0 0 13 0 1491.6915 H3BN63;Q86YC2 H3BN63 355 367 PALB2 Partner and localizer of BRCA2 yes no 2 0.022734 63.754 By matching By MS/MS 1 1 14624000 7272500 7351500 1274 1232 1439 3363;3364 3335 3335 2302 1 EGSEFSFSDGEVAEK DDKNIETKEGSEFSFS SDGEVAEKAEVYGSEN K E G E K A 1 0 0 1 0 0 4 2 0 0 0 1 0 2 0 3 0 0 0 1 0 0 15 0 1616.6842 Q9BVS4 Q9BVS4 330 344 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 2 0.0094496 75.376 By MS/MS By MS/MS 2 2 48789000 27855000 20934000 1275 2758 1440;1441 3365;3366;3367;3368 3336;3337 3337 5738;5739 0 EGSIETLSNSSGSTSGSIPR GSGTELQREGSIETLS STSGSIPRNFDGYRSP R E G P R N 0 1 1 0 0 0 2 3 0 2 1 0 0 0 1 7 2 0 0 0 0 0 20 0 1964.9287 K7ESE9;Q9H6U6 K7ESE9 655 674 BCAS3 Breast carcinoma-amplified sequence 3 yes no 2 0.00039888 109.28 By MS/MS By MS/MS 1 1 16835000 8404000 8430900 1276 1396 1442 3369;3370 3338;3339 3338 2567 2 EGSLGDELLPLGYSEPEQQEGASAGAPSPTLELASR PSRRGVHKEGSLGDEL PTLELASRSPSGGAAG K E G S R S 4 1 0 1 0 2 6 5 0 0 6 0 0 0 4 5 1 0 1 0 0 0 36 0 3654.7537 Q96CX2 Q96CX2 149 184 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 3 8.4947E-14 90.742 By MS/MS By MS/MS 1 1 86913000 41361000 45552000 1277 2633 1443 3371;3372 3340;3341 3341 5410;7778 2 EGSPANWK IASKEAVREGSPANWK EGSPANWKRKEKLPQV R E G W K R 1 0 1 0 0 0 1 1 0 0 0 1 0 0 1 1 0 1 0 0 0 0 8 0 887.41373 O96019 O96019 231 238 ACTL6A Actin-like protein 6A yes yes 2 0.022557 70.908 By MS/MS By matching 1 1 26713000 15105000 11608000 1278 1619 1444 3373;3374 3342 3342 3065 1 EGSPAPLEPEPGAAQPK QTPESLSREGSPAPLE EPGAAQPKLAVIQEAR R E G P K L 3 0 0 0 0 1 3 2 0 0 1 1 0 0 5 1 0 0 0 0 0 0 17 0 1673.8261 Q01167 Q01167 396 412 FOXK2 Forkhead box protein K2 yes yes 2;3 1.1966E-22 154.81 By MS/MS By MS/MS 2 2 454610000 198110000 256500000 1279 1979 1445 3375;3376;3377;3378 3343;3344;3345 3345 3796 3 EGSPIPHDPEFGSK QTPECLSREGSPIPHD HDPEFGSKLASVPEYR R E G S K L 0 0 0 1 0 0 2 2 1 1 0 1 0 1 3 2 0 0 0 0 0 0 14 0 1495.6943 P85037 P85037 443 456 FOXK1 Forkhead box protein K1 yes yes 2;3 2.4167E-26 169.17 By MS/MS By MS/MS 2 2 222060000 131890000 90169000 1280 1968 1446 3379;3380;3381;3382 3346;3347;3348;3349 3349 3759 4 EGSQGELTPANSQSR SHSKSPPREGSQGELT TPANSQSRMSTNM___ R E G S R M 1 1 1 0 0 2 2 2 0 0 1 0 0 0 1 3 1 0 0 0 0 0 15 0 1559.7176 J3QQX0;C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098 J3QQX0 60 74 GPS1 COP9 signalosome complex subunit 1 yes no 2 0.00029965 117.07 By MS/MS By matching 1 1 33654000 18143000 15512000 1281 182 1447 3383;3384 3350 3350 6875 1 EGSTQQLQTTSPK FIKVYWHREGSTQQLQ QLQTTSPKPLVQQPIL R E G P K P 0 0 0 0 0 3 1 1 0 0 1 1 0 0 1 2 3 0 0 0 0 0 13 0 1403.6892 A0A087X0H9;Q5T8P6 A0A087X0H9 611 623 RBM26 RNA-binding protein 26 yes no 2 0.0012797 92.866 By MS/MS By MS/MS 1 1 25929000 13109000 12820000 1282 154 1448 3385;3386 3351;3352;3353 3351 247;6871;6872 3 EGSTQQLQTTSPKPLVQQPILPVVK FIKVYWHREGSTQQLQ QPILPVVKQSVKERLG R E G V K Q 0 0 0 0 0 5 1 1 0 1 3 2 0 0 4 2 3 0 0 3 0 0 25 1 2715.5171 A0A087X0H9 A0A087X0H9 611 635 RBM26 yes yes 3 1.2436E-06 112.56 By MS/MS By MS/MS 1 1 48553000 21978000 26575000 1283 154 1449 3387;3388 3354;3355;3356 3356 247;6871;6872 3 EGSVLDILKSPGFASPK FRPAEILKEGSVLDIL SPGFASPKIDSVAAQP K E G P K I 1 0 0 1 0 0 1 2 0 1 2 2 0 1 2 3 0 0 0 1 0 0 17 1 1743.9407 P49790 P49790 605 621 NUP153 Nuclear pore complex protein Nup153 yes yes 2;3 0 316.25 By MS/MS By MS/MS 3 4 447030000 229300000 217720000 1284 1859 1450;1451 3389;3390;3391;3392;3393;3394;3395 3357;3358;3359;3360;3361;3362;3363 3360 3585;3586 7 EGTGTEMPMIGDR GVLKVIKREGTGTEMP EMPMIGDRVFVHYTGW R E G D R V 0 1 0 1 0 0 2 3 0 1 0 0 2 0 1 0 2 0 0 0 0 0 13 0 1392.6014 Q02790 Q02790 40 52 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 0.005887 68.786 By MS/MS 1 5579400 0 5579400 1285 1987 1452 3396 3364 3364 785;786 1 EGTLTQVPLAPPPPGAPPSPAPAR DKEAPTPKEGTLTQVP PPSPAPARFTARGGRV K E G A R F 4 1 0 0 0 1 1 2 0 0 2 0 0 0 9 1 2 0 0 1 0 0 24 0 2317.243 P48634 P48634 1129 1152 PRRC2A Protein PRRC2A yes yes 2;3 7.7083E-07 97.662 By MS/MS By MS/MS 2 2 53511000 23703000 29808000 1286 1846 1453 3397;3398;3399;3400 3365;3366;3367;3368 3368 3539 4 EGTPGSPSETPGPSPAGPAGDEPAESPSETPGPR TEGRTGPKEGTPGSPS PSETPGPRPAGPAGDE K E G P R P 3 1 0 1 0 0 5 6 0 0 0 0 0 0 10 5 3 0 0 0 0 0 34 0 3198.4225 A0A0A0MRN5;Q9NZT2 A0A0A0MRN5 460 493 OGFR Opioid growth factor receptor yes no 3 0.0052514 48.13 By MS/MS 1 14323000 0 14323000 1287 225 1454 3401 3369 3369 397 1 EGVDEYNEMPMPV AEPVFDEREGVDEYNE YNEMPMPV________ R E G P V - 0 0 1 1 0 0 3 1 0 0 0 0 2 0 2 0 0 0 1 2 0 0 13 0 1508.6163 P04920 P04920 1229 1241 SLC4A2 Anion exchange protein 2 yes yes 2 0.015216 48.602 By matching By MS/MS 1 1 7971900 4021600 3950200 1288 1636 1455 3402;3403 3370 3370 589;590 8216 1 EGVTPWASFK TSDGEKKREGVTPWAS VTPWASFKKMVTPKKR R E G F K K 1 0 0 0 0 0 1 1 0 0 0 1 0 1 1 1 1 1 0 1 0 0 10 0 1120.5553 Q02952 Q02952 605 614 AKAP12 A-kinase anchor protein 12 yes yes 2 0.00022918 122.46 By MS/MS By MS/MS 1 1 57844000 31072000 26771000 1289 1991 1456 3404;3405 3371;3372 3372 3822 2 EGVTPWASFKK TSDGEKKREGVTPWAS TPWASFKKMVTPKKRV R E G K K M 1 0 0 0 0 0 1 1 0 0 0 2 0 1 1 1 1 1 0 1 0 0 11 1 1248.6503 Q02952 Q02952 605 615 AKAP12 A-kinase anchor protein 12 yes yes 2 1.5308E-05 136.01 By MS/MS By MS/MS 1 1 236950000 125960000 110990000 1290 1991 1457 3406;3407 3373;3374 3373 3822 2 EGVVECSFVK LVDAMNGKEGVVECSF VVECSFVKSQETECTY K E G V K S 0 0 0 0 1 0 2 1 0 0 0 1 0 1 0 1 0 0 0 3 0 0 10 0 1152.5485 G3XAL0;P40926 G3XAL0 163 172 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 2 0.0076436 98.582 By MS/MS By matching 1 1 10823000 5501700 5321000 1291 1091 1458 3408;3409 3375 3375 1 EGYVPQEEVPVYENK WRKQRRVKEGYVPQEE EVPVYENKYVKFFKSK K E G N K Y 0 0 1 0 0 1 4 1 0 0 0 1 0 0 2 0 0 0 2 3 0 0 15 0 1778.8363 Q9BRP8 Q9BRP8 34 48 WIBG Partner of Y14 and mago yes yes 2 0.00016611 119.03 By MS/MS By MS/MS 1 1 46542000 23221000 23321000 1292 2744 1459 3410;3411 3376;3377 3377 8448 2 EHAPLASPVENK VNKVAKPKEHAPLASP LASPVENKEVYQCRLC K E H N K E 2 0 1 0 0 0 2 0 1 0 1 1 0 0 2 1 0 0 0 1 0 0 12 0 1290.6568 Q9ULJ3 Q9ULJ3 708 719 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2 1.5249E-09 140.33 By MS/MS By matching 1 1 41400000 20496000 20903000 1293 3043 1460 3412;3413 3378 3378 6410 1 EHASIDAQSGAGVPNPSTSASPK ELEDLVRREHASIDAQ PSTSASPKKSPPPAKD R E H P K K 4 0 1 1 0 1 1 2 1 1 0 1 0 0 3 5 1 0 0 1 0 0 23 0 2207.0455 Q8IXJ6 Q8IXJ6 348 370 SIRT2 NAD-dependent protein deacetylase sirtuin-2 yes yes 2 0.0071329 61.186 By MS/MS By matching 1 1 6781600 4920500 1861200 1294 2435 1461 3414;3415 3379 3379 4980 1 EHMESRMVTETEETQEK CAELGESKEHMESRMV ETEETQEKKAESKEPI K E H E K K 0 1 0 0 0 1 6 0 1 0 0 1 2 0 0 1 3 0 0 1 0 0 17 1 2092.9041 Q6IQ49 Q6IQ49 306 322 SDE2 Protein SDE2 homolog yes yes 2 0.031363 51.591 By MS/MS 1 0 0 0 1295 2306 1462 3416 3380 3380 924 1 EHNSMWASLSSPDAEAVEPDFSSIER KLPSNVAREHNSMWAS PDFSSIERLFSFPAAK R E H E R L 3 1 1 2 0 0 4 0 1 1 1 0 1 1 2 6 0 1 0 1 0 0 26 0 2890.2716 A0A0A0MQU1;Q27J81 A0A0A0MQU1 47 72 INF2 Inverted formin-2 yes no 3 9.3847E-05 76.241 By MS/MS By MS/MS 1 1 44927000 27180000 17746000 1296 190 1463 3417;3418 3381;3382 3381 82 340;341 2 EHSLQVSPSLEK PSLHSFIKEHSLQVSP QVSPSLEKGAKADTGL K E H E K G 0 0 0 0 0 1 2 0 1 0 2 1 0 0 1 3 0 0 0 1 0 0 12 0 1352.6936 O95235 O95235 526 537 KIF20A Kinesin-like protein KIF20A yes yes 2 0.00024656 116.98 By MS/MS By MS/MS 1 2 29502000 14434000 15068000 1297 1584 1464 3419;3420;3421 3383;3384 3383 3000 2 EHYPVSSPSSPSPPAQPGGVSR TYPMPTAKEHYPVSSP AQPGGVSRNSPLDCGS K E H S R N 1 1 0 0 0 1 1 2 1 0 0 0 0 0 6 6 0 0 1 2 0 0 22 0 2219.0607 H0YM23;O75179 H0YM23 1920 1941 ANKRD17 Ankyrin repeat domain-containing protein 17 yes no 2;3 0.00033007 83.065 By MS/MS By MS/MS 3 2 81513000 41326000 40187000 1298 1215 1465;1466 3422;3423;3424;3425;3426 3385;3386;3387;3388;3389 3388 2266;2267;2268;2269;2270 5 EIAEAYLGK SMVLTKMKEIAEAYLG IAEAYLGKTVTNAVVT K E I G K T 2 0 0 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 992.51786 P11142;E9PKE3;E9PN89;E9PLF4;E9PI65;E9PQQ4;E9PQK7;E9PPY6;E9PK54 P11142 129 137 HSPA8 Heat shock cognate 71 kDa protein no no 2 0.010613 86.833 By MS/MS By MS/MS 1 1 13152000 6889200 6263100 1299 1680;894 1467 3427;3428 3390;3391 3391 2 EIAIVHSDAEK EAGEEEEKEIAIVHSD IVHSDAEKEQEEEEQK K E I E K E 2 0 0 1 0 0 2 0 1 2 0 1 0 0 0 1 0 0 0 1 0 0 11 0 1210.6194 Q9H307 Q9H307 341 351 PNN Pinin yes yes 2;3 0.00010614 119.21 By MS/MS By MS/MS 2 2 197860000 103410000 94447000 1300 2826 1468 3429;3430;3431;3432 3392;3393;3394;3395 3392 5923 4 EIAIVHSDAEKEQEEEEQK EAGEEEEKEIAIVHSD EQEEEEQKQEMEVKME K E I Q K Q 2 0 0 1 0 2 7 0 1 2 0 2 0 0 0 1 0 0 0 1 0 0 19 1 2240.0445 Q9H307 Q9H307 341 359 PNN Pinin yes yes 3 1.5035E-10 136.53 By MS/MS By MS/MS 1 1 51317000 33389000 17928000 1301 2826 1469 3433;3434 3396;3397 3397 5923 2 EIAIVHSDAEKEQEEEEQKQEMEVK EAGEEEEKEIAIVHSD QKQEMEVKMEEETEVR K E I V K M 2 0 0 1 0 3 9 0 1 2 0 3 1 0 0 1 0 0 0 2 0 0 25 2 2984.3921 Q9H307 Q9H307 341 365 PNN Pinin yes yes 3 3.3102E-05 85.397 By MS/MS By MS/MS 1 1 225370000 64914000 160460000 1302 2826 1470 3435;3436 3398;3399 3398 1123 5923 2 EIAQDFK LPFQRLVREIAQDFKT REIAQDFKTDLRFQSA R E I F K T 1 0 0 1 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 0 7 0 849.42323 K7EMV3;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431 K7EMV3 74 80 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 1 0.0096693 96.19 By MS/MS By MS/MS 1 1 35599000 16103000 19496000 1303 544 1471 3437;3438 3400;3401 3400 2 EIDCLSPEAQK SPAAAQSREIDCLSPE CLSPEAQKLAEARLAA R E I Q K L 1 0 0 1 1 1 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 11 0 1288.5969 Q32MZ4;C9JTC6 Q32MZ4 11 21 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes no 2 0.0006233 110.98 By MS/MS By MS/MS 1 1 11217000 4813300 6403800 1304 2185 1472 3439;3440 3402;3403 3403 4344 2 EIDLLLGQTDDTR LRDKERRKEIDLLLGQ LGQTDDTRYHVLVNLG K E I T R Y 0 1 0 3 0 1 1 1 0 1 3 0 0 0 0 0 2 0 0 0 0 0 13 0 1487.7468 O75643 O75643 156 168 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 0.0070403 87.789 By MS/MS 1 2164200 0 2164200 1305 1551 1473 3441 3404 3404 0 EIEEEPLSEDLE SPELEDDREIEEEPLS EPLSEDLE________ R E I L E - 0 0 0 1 0 0 6 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 12 0 1430.6301 A8MUV4;A0A0U1RQR8;A0A0U1RQY3;A0A0U1RQM2;O15409;Q0PRL4 A8MUV4 683 694 FOXP2 Forkhead box protein P2 yes no 2 0.028614 79.036 By matching By MS/MS 1 1 11196000 6048300 5148000 1306 385 1474 3442;3443 3405 3405 0 EIESSPQYR LRAAQLAREIESSPQY IESSPQYRLRIAMEND R E I Y R L 0 1 0 0 0 1 2 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 9 0 1107.5197 Q8WWM7;H3BUF6;H3BSK9 Q8WWM7 302 310 ATXN2L Ataxin-2-like protein yes no 2 0.0012954 130.41 By MS/MS By MS/MS 1 1 25093000 15228000 9864400 1307 2564 1475 3444;3445 3406;3407 3407 5238 2 EIEYVETVTSR NALKYEHKEIEYVETV YVETVTSRQSEIQKFI K E I S R Q 0 1 0 0 0 0 3 0 0 1 0 0 0 0 0 1 2 0 1 2 0 0 11 0 1324.6511 Q9UHR4 Q9UHR4 160 170 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 0.00017285 119.68 By MS/MS By MS/MS 1 1 16391000 7838500 8552600 1308 3006 1476 3446;3447 3408;3409 3408 8491 2 EIIDLVLDR RGHYTIGKEIIDLVLD IIDLVLDRIRKLADQC K E I D R I 0 1 0 2 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1084.6128 F5H5D3;Q9BQE3;F8VVB9;F8VRZ4;F8VS66;P68363;Q71U36;F8VQQ4 P68363 183 191 TUBA1C;TUBA1B;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 2 0.0057607 141.2 By MS/MS By MS/MS 1 1 230980000 145670000 85310000 1309 976;1957;2360 1477 3448;3449 3410;3411 3411 2 EIIKQEESVDPDYWEK GEEEEVEREIIKQEES VDPDYWEKLLRHHYEQ R E I E K L 0 0 0 2 0 1 4 0 0 2 0 2 0 0 1 1 0 1 1 1 0 0 16 1 2006.9473 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 1294 1309 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 5.3469E-11 140.96 By MS/MS By MS/MS 1 1 24709000 15720000 8988800 1310 319 1478 3450;3451 3412;3413 3412 554 2 EIKCSPSESPLMEK RMKRKIEREIKCSPSE SESPLMEKKNSLKEDH R E I E K K 0 0 0 0 1 0 3 0 0 1 1 2 1 0 2 3 0 0 0 0 0 0 14 1 1633.7691 Q8WUM9 Q8WUM9 261 274 SLC20A1 Sodium-dependent phosphate transporter 1 yes yes 2 0.0031804 82.578 By MS/MS By MS/MS 1 1 19690000 12019000 7671000 1311 2557 1479 3452;3453 3414;3415 3415 1022 5220;5221;5222 2 EILGTAQSVGCNVDGR RELSGTIKEILGTAQS VGCNVDGRHPHDIIDD K E I G R H 1 1 1 1 1 1 1 3 0 1 1 0 0 0 0 1 1 0 0 2 0 0 16 0 1674.7995 P30050 P30050 131 146 RPL12 60S ribosomal protein L12 yes yes 2 0.0053866 82.543 By MS/MS By MS/MS 1 1 17116000 9274400 7841200 1312 1778 1480 3454;3455 3416;3417 3416 2 EILSPLFPR SKKHLQEREILSPLFP ILSPLFPRNGTKSPEA R E I P R N 0 1 0 0 0 0 1 0 0 1 2 0 0 1 2 1 0 0 0 0 0 0 9 0 1070.6124 Q5VWN6 Q5VWN6 672 680 FAM208B Protein FAM208B yes yes 2 0.011589 101.66 By MS/MS 1 0 0 0 1313 2275 1481 3456 3418 3418 4565 1 EILSPVDIIDR LPAPAIRKEILSPVDI SPVDIIDRNNHHNMM_ K E I D R N 0 1 0 2 0 0 1 0 0 3 1 0 0 0 1 1 0 0 0 1 0 0 11 0 1268.6976 O14495 O14495 294 304 PPAP2B Lipid phosphate phosphohydrolase 3 yes yes 2 0.0048813 81.709 By MS/MS 1 2172500 2172500 0 1314 1447 1482 3457 3419 3419 2661 1 EIPFNEDPNPNTHSSGPSTPLK NSPSKEMKEIPFNEDP SGPSTPLKNQTYSFSP K E I L K N 0 0 3 1 0 0 2 1 1 1 1 1 0 1 5 3 2 0 0 0 0 0 22 0 2377.1186 Q86YS7;H0YFE9 Q86YS7 267 288 C2CD5 C2 domain-containing protein 5 yes no 3 0.0059851 67.995 By MS/MS 1 0 0 0 1315 2422 1483 3458 3420 3420 4946;4947;7706 1 EIPSATQSPISK KLEKKDAKEIPSATQS ATQSPISKKRKKKGFL K E I S K K 1 0 0 0 0 1 1 0 0 2 0 1 0 0 2 3 1 0 0 0 0 0 12 0 1256.6612 Q9BQG0;I3L1L3 Q9BQG0 1156 1167 MYBBP1A Myb-binding protein 1A yes no 2 0.00096339 97.223 By MS/MS By MS/MS 1 1 360550000 179320000 181230000 1316 2741 1484 3459;3460 3421;3422;3423;3424 3424 5687 4 EIPSATQSPISKK KLEKKDAKEIPSATQS TQSPISKKRKKKGFLP K E I K K R 1 0 0 0 0 1 1 0 0 2 0 2 0 0 2 3 1 0 0 0 0 0 13 1 1384.7562 Q9BQG0;I3L1L3 Q9BQG0 1156 1168 MYBBP1A Myb-binding protein 1A yes no 2 0.010781 75.566 By MS/MS 1 21768000 21768000 0 1317 2741 1485 3461 3425 3425 5687 1 EIQNGNLHESDSESVPR EKKKNKKKEIQNGNLH SDSESVPRDFKLSDAL K E I P R D 0 1 2 1 0 1 3 1 1 1 1 0 0 0 1 3 0 0 0 1 0 0 17 0 1909.8766 Q86UP2 Q86UP2 66 82 KTN1 Kinectin yes yes 2;3 7.8042E-11 143.23 By MS/MS By MS/MS 5 5 766640000 413620000 353020000 1318 2402 1486;1487 3462;3463;3464;3465;3466;3467;3468;3469;3470;3471 3426;3427;3428;3429;3430;3431;3432;3433;3434;3435 3430 114;163 4902;4903 9 EISDDEAEEEK YLEKEREKEISDDEAE DDEAEEEKGEKEEEDK K E I E K G 1 0 0 2 0 0 5 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 11 0 1292.5256 P08238;Q58FF7 P08238 224 234 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 1.0134E-05 125.71 By MS/MS By MS/MS 1 1 66911000 34355000 32555000 1319 1658 1488 3472;3473 3436;3437;3438;3439 3439 3126 4 EISDDEAEEEKGEK YLEKEREKEISDDEAE AEEEKGEKEEEDKDDE K E I E K E 1 0 0 2 0 0 6 1 0 1 0 2 0 0 0 1 0 0 0 0 0 0 14 1 1606.6846 P08238;Q58FF7 P08238 224 237 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2;3 1.8536E-06 125.84 By MS/MS By MS/MS 1 2 91029000 15874000 75155000 1320 1658 1489 3474;3475;3476 3440;3441;3442;3443 3443 3126 4 EISDDEAEEEKGEKEEEDK YLEKEREKEISDDEAE GEKEEEDKDDEEKPKI K E I D K D 1 0 0 3 0 0 9 1 0 1 0 3 0 0 0 1 0 0 0 0 0 0 19 2 2236.9343 P08238;Q58FF7 P08238 224 242 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 3 0.0026866 77.13 By MS/MS By MS/MS 1 1 41919000 22548000 19371000 1321 1658 1490 3477;3478 3444;3445 3444 3126 2 EISPGSGPGEIR ITEEMNGKEISPGSGP GSGPGEIRKVEPVTQK K E I I R K 0 1 0 0 0 0 2 3 0 2 0 0 0 0 2 2 0 0 0 0 0 0 12 0 1197.599 O43491;E9PK52;E9PHY5;H0Y5B0;E9PMV8;Q6R5J7;E9PMG5 O43491 713 724 EPB41L2 Band 4.1-like protein 2 yes no 2 0.0034453 84.31 By matching By MS/MS 2 2 131980000 53807000 78174000 1322 1502 1491;1492 3479;3480;3481;3482 3446;3447 3446 2802;2803 1 EITALAPSTMK GIADRMQKEITALAPS ALAPSTMKIKIIAPPE K E I M K I 2 0 0 0 0 0 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 0 11 0 1160.6111 P63261;P60709;P68133;P68032;A6NL76;P63267;P62736 P63261 316 326 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle no no 2 0.0017328 107.79 By MS/MS By MS/MS 2 2 56059000 26728000 29331000 1323 1928;1955 1493;1494 3483;3484;3485;3486 3448;3449;3450;3451 3449 752 3722;7497 4 EITQDTNDITYADLNLPK HEPEKNAREITQDTND YADLNLPKGKKPAPQA R E I P K G 1 0 2 3 0 1 1 0 0 2 2 1 0 0 1 0 3 0 1 0 0 0 18 0 2063.0059 P78324 P78324 419 436 SIRPA Tyrosine-protein phosphatase non-receptor type substrate 1 yes yes 2 3.5489E-87 179.5 By MS/MS 1 19568000 19568000 0 1324 1960 1495 3487 3452 3452 8312 0 EIVLADVIDNDSWR FGVDVTTKEIVLADVI VIDNDSWRLWPSGDRS K E I W R L 1 1 1 3 0 0 1 0 0 2 1 0 0 0 0 1 0 1 0 2 0 0 14 0 1643.8155 E9PBS1;P22234;D6RF62 E9PBS1 202 215 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 0.00031217 120.86 By MS/MS 1 4161300 0 4161300 1325 845 1496 3488 3453 3453 1 EKEESPQPR FTSVPGGREKEESPQP KEESPQPRRKRQPSSS R E K P R R 0 1 0 0 0 1 3 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 9 1 1098.5306 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 88 96 C12orf43 Uncharacterized protein C12orf43 yes no 2 0.0082439 93.442 By matching By MS/MS 1 1 16292000 10802000 5490100 1326 795 1497 3489;3490 3454 3454 1420 1 EKEISDDEAEEEK TLYLEKEREKEISDDE DDEAEEEKGEKEEEDK R E K E K G 1 0 0 2 0 0 6 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 13 1 1549.6631 P08238 P08238 222 234 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2;3 5.4673E-86 220.52 By MS/MS By MS/MS 2 2 132370000 72924000 59445000 1327 1658 1498 3491;3492;3493;3494 3455;3456;3457;3458;3459 3456 3126 5 EKEISDDEAEEEKGEK TLYLEKEREKEISDDE AEEEKGEKEEEDKDDE R E K E K E 1 0 0 2 0 0 7 1 0 1 0 3 0 0 0 1 0 0 0 0 0 0 16 2 1863.8222 P08238 P08238 222 237 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2;3 9.0315E-17 153.36 By MS/MS By MS/MS 2 2 279960000 142580000 137380000 1328 1658 1499 3495;3496;3497;3498 3460;3461;3462;3463 3461 3126 4 EKELSPPPGLPSK ETSGTSAREKELSPPP PPPGLPSKIGSISRQS R E K S K I 0 0 0 0 0 0 2 1 0 0 2 2 0 0 4 2 0 0 0 0 0 0 13 1 1377.7504 Q7Z4S6;A0A1B0GV47;H0YIM6;H0YHT2;H0YI78 Q7Z4S6 1208 1220 KIF21A Kinesin-like protein KIF21A yes no 2 0.0021523 102.65 By MS/MS By MS/MS 1 1 15140000 9146000 5993600 1329 2386 1500 3499;3500 3464;3465 3465 4846 2 EKENSLEAIRSK AKLMKVIKEKENSLEA SLEAIRSKLDKAEDQH K E K S K L 1 1 1 0 0 0 3 0 0 1 1 2 0 0 0 2 0 0 0 0 0 0 12 2 1402.7416 F5H6A0;J3KP58;P30622;F5H0N7 F5H6A0 628 639 CLIP1 CAP-Gly domain-containing linker protein 1 yes no 2 0.0078303 79.07 By MS/MS 1 0 0 0 1330 981 1501 3501 3466 3466 1836;1837 1 EKEPGEQASVPLSPK SPIRRKGKEKEPGEQA ASVPLSPKKGSEASAA K E K P K K 1 0 0 0 0 1 3 1 0 0 1 2 0 0 3 2 0 0 0 1 0 0 15 1 1594.8203 P42858 P42858 1187 1201 HTT Huntingtin yes yes 2 1.9668E-08 111.52 By MS/MS By MS/MS 1 1 14619000 6959900 7658700 1331 1830 1502 3502;3503 3467;3468 3467 3455 1 EKEPSYPMPVQETQAPESPGENSEQALQTLSPR SIPYNSCREKEPSYPM ALQTLSPRAIPRNPDG R E K P R A 2 1 1 0 0 4 6 1 0 0 2 1 1 0 6 4 2 0 1 1 0 0 33 1 3653.7155 Q7Z434 Q7Z434 135 167 MAVS Mitochondrial antiviral-signaling protein yes yes 3 0.0032422 52.234 By MS/MS By matching 1 1 11790000 8969900 2819800 1332 2382 1503 3504;3505 3469 3469 960 4838 1 EKEVDGLLTSEPMGSPVSSK LKEEPKGKEKEVDGLL MGSPVSSKTESVSDKE K E K S K T 0 0 0 1 0 0 3 2 0 0 2 2 1 0 2 4 1 0 0 2 0 0 20 1 2089.0249 Q8WWM7;H3BUF6 Q8WWM7 580 599 ATXN2L Ataxin-2-like protein yes no 2;3 8.0284E-16 144.75 By MS/MS By MS/MS 4 4 163200000 82733000 80466000 1333 2564 1504;1505 3506;3507;3508;3509;3510;3511;3512;3513 3470;3471;3472;3473;3474;3475;3476 3471 1026 5239;5240 7 EKFSFEPK PSVLESVKEKFSFEPK EKFSFEPKIRSPRRFI K E K P K I 0 0 0 0 0 0 2 0 0 0 0 2 0 2 1 1 0 0 0 0 0 0 8 1 1010.5073 P23443;K7ERJ3 P23443 424 431 RPS6KB1 Ribosomal protein S6 kinase beta-1 yes no 2 0.018469 93.442 By MS/MS By MS/MS 1 1 16695000 6976200 9719100 1334 1756 1506 3514;3515 3477;3478 3478 3311 2 EKGPTTGEGALDLSDVHSPPKSPEGK VIRRCQQKEKGPTTGE PPKSPEGKTSAQTTPS K E K G K T 1 0 0 2 0 0 3 4 1 0 2 3 0 0 4 3 2 0 0 1 0 0 26 2 2632.298 O95684 O95684 139 164 FGFR1OP FGFR1 oncogene partner yes yes 3;4 0.0055579 56.832 By matching By MS/MS 1 2 68415000 33794000 34621000 1335 1605 1507 3516;3517;3518 3479;3480 3479 3040;3041;3042 2 EKLEATINELV GEFSGANKEKLEATIN EATINELV________ K E K L V - 1 0 1 0 0 0 3 0 0 1 2 1 0 0 0 0 1 0 0 1 0 0 11 1 1257.6816 P10599 P10599 95 105 TXN Thioredoxin yes yes 2 2.8545E-09 155.07 By MS/MS By MS/MS 1 1 13896000 7443100 6452500 1336 1675 1508 3519;3520 3481;3482 3481 2 EKLQEEGGGSDEEETGSPSEDGMQSAR KRLIAEAKEKLQEEGG EDGMQSARTQARPREP K E K A R T 1 1 0 2 0 2 7 5 0 0 1 1 1 0 1 4 1 0 0 0 0 0 27 1 2838.1734 Q13610 Q13610 41 67 PWP1 Periodic tryptophan protein 1 homolog yes yes 3 0.00025798 72.035 By matching By MS/MS 1 1 274060000 147040000 127010000 1337 2071 1509 3521;3522 3483 3483 828 4087 1 EKMHEQEKIR EEKIRELEEKMHEQEK MHEQEKIREQEEKRQE E E K I R E 0 1 0 0 0 1 3 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 10 2 1326.6714 A0A0G2JRP8;A0A0G2JP21;A0A087WU96;Q8N7Z2 A0A0G2JRP8 348 357 GOLGA6L1 Golgin subfamily A member 6-like protein 1 yes no 2 0.029557 47.96 By matching By MS/MS 1 1 14488000 7792000 6696500 1338 52 1510 3523;3524 3484 3484 20 0 EKPCVSPTVGEK MENMSEVKEKPCVSPT VSPTVGEKNLLVDPNS K E K E K N 0 0 0 0 1 0 2 1 0 0 0 2 0 0 2 1 1 0 0 2 0 0 12 1 1329.6599 Q68DQ2 Q68DQ2 1275 1286 CRYBG3 Very large A-kinase anchor protein yes yes 2 0.030149 68.262 By MS/MS By MS/MS 1 1 6439600 3241600 3197900 1339 2296 1511 3525;3526 3485;3486 3485 2 EKPDSDDDLDIASLVTAK RVIKSSGREKPDSDDD IASLVTAKLVNTTITP R E K A K L 2 0 0 5 0 0 1 0 0 1 2 2 0 0 1 2 1 0 0 1 0 0 18 1 1930.9371 Q86V48 Q86V48 655 672 LUZP1 Leucine zipper protein 1 yes yes 2;3 1.0472E-22 156.08 By MS/MS By MS/MS 2 2 82594000 41807000 40787000 1340 2406 1512 3527;3528;3529;3530 3487;3488;3489;3490 3490 4908 4 EKPELSEPSHLNGPSSDPEAAFLSR LPAVIPKKEKPELSEP PEAAFLSRDVDDGSGS K E K S R D 2 1 1 1 0 0 4 1 1 0 3 1 0 1 4 5 0 0 0 0 0 0 25 1 2693.2933 F5GWT4;Q9H4A3 F5GWT4 1749 1773 WNK1 Serine/threonine-protein kinase WNK1 yes no 3 0.026165 57.845 By MS/MS 1 0 0 0 1341 941 1513 3531 3491 3491 1764;1765;1766 1 EKPIVFYQQALPDSELTQEALK SSSLYSYREKPIVFYQ ELTQEALKVSAVPQPA R E K L K V 2 0 0 1 0 3 3 0 0 1 3 2 0 1 2 1 1 0 1 1 0 0 22 1 2546.3268 A0A087WV20;A0A087WTU9;A0A087WZY3;Q8TCU4 A0A087WV20 1716 1737 ALMS1 Alstrom syndrome protein 1 yes no 3 0.014973 57.798 By MS/MS 1 3077500 3077500 0 1342 45 1514 3532 3492 3492 84;7977 0 EKPYFPIPEEYTFIQNVPLEDR VEFNFGQKEKPYFPIP QNVPLEDRVRGPKGPE K E K D R V 0 1 1 1 0 1 4 0 0 2 1 1 0 2 4 0 1 0 2 1 0 0 22 1 2723.3483 Q00839 Q00839 463 484 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3 0.00022869 113.89 By matching By MS/MS 1 1 33857000 7031400 26825000 1343 1976 1515 3533;3534 3493 3493 1 EKQEEEVDYESEEEEER DASDAKRKEKQEEEVD ESEEEEEREGEENDDE K E K E R E 0 1 0 1 0 1 10 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 17 1 2184.8819 B9ZVN9;O95602 B9ZVN9 1419 1435 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 yes no 2 0.00036184 117.29 By MS/MS By matching 1 1 25144000 13698000 11447000 1344 613 1516 3535;3536 3494 3494 1115 1 EKQSDDEVYAPGLDIESSLK EQRDRSIREKQSDDEV LDIESSLKQLAERRTD R E K L K Q 1 0 0 3 0 1 3 1 0 1 2 2 0 0 1 3 0 0 1 1 0 0 20 1 2222.059 Q15459 Q15459 448 467 SF3A1 Splicing factor 3A subunit 1 yes yes 2 0.0007805 93.029 By MS/MS By matching 1 1 18930000 11117000 7813300 1345 2141 1517 3537;3538 3495 3495 4248 1 EKQSSEEEEKETR GRQERSTKEKQSSEEE EEEEKETRGVQKRRGG K E K T R G 0 1 0 0 0 1 6 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 13 2 1607.7275 A2AAT0;Q92504 A2AAT0 182 194 SLC39A7 Zinc transporter SLC39A7 yes no 2 0.0080522 93.716 By matching By MS/MS 1 1 29349000 8150000 21199000 1346 453 1518 3539;3540 3496 3496 846;847 1 EKTPELPEPSVK PSPAPEKKEKTPELPE ELPEPSVKVKEPSVQE K E K V K V 0 0 0 0 0 0 3 0 0 0 1 2 0 0 3 1 1 0 0 1 0 0 12 1 1352.7187 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 218 229 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 1.032E-100 231.74 By MS/MS By MS/MS 2 2 444590000 197770000 246820000 1347 511 1519 3541;3542;3543;3544 3497;3498;3499;3500;3501;3502;3503;3504 3502 6971 8 EKTPSPKEEDEEPESPPEK PTASKASKEKTPSPKE EPESPPEKKTSTSPPP K E K E K K 0 0 0 1 0 0 7 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 19 2 2180.9961 Q9H1E3 Q9H1E3 200 218 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0013911 86.411 By MS/MS By MS/MS 1 1 16963000 7954000 9009400 1348 2816 1520 3545;3546 3505;3506;3507 3507 5891 3 EKVDPKDYMFSGLK KQYSWDQREKVDPKDY DYMFSGLKDETVGRLP R E K L K D 0 0 0 2 0 0 1 1 0 0 1 3 1 1 1 1 0 0 1 1 0 0 14 2 1655.8229 O75695 O75695 33 46 RP2 Protein XRP2 yes yes 3 0.028341 54.199 By MS/MS 1 0 0 0 1349 1554 1521 3547 3508 3508 562 1 EKVPDISDSNNKHK MTDQGPSKEKVPDISD SDSNNKHKYVGIHSSF K E K H K Y 0 0 2 2 0 0 1 0 1 1 0 3 0 0 1 2 0 0 0 1 0 0 14 2 1609.806 A0A087WXM3 A0A087WXM3 166 179 NLRP5 yes yes 2 0.016417 54.784 By matching By MS/MS 1 1 13341000 7118000 6223200 1350 109 1522 3548;3549 3509 3509 189;190 1 ELAEDDSILK DELKRIARELAEDDSI AEDDSILK________ R E L L K - 1 0 0 2 0 0 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1131.5659 P56385 P56385 60 69 ATP5I ATP synthase subunit e, mitochondrial yes yes 2 0.010222 83.998 By MS/MS By MS/MS 1 1 11323000 5201700 6121500 1351 1916 1523 3550;3551 3510;3511 3511 2 ELAGNTSSPPLSPGRPSPMQR MDFSRRLRELAGNTSS GRPSPMQRLLQPFQPG R E L Q R L 1 2 1 0 0 1 1 2 0 0 2 0 1 0 5 4 1 0 0 0 0 0 21 1 2178.0851 Q9H165 Q9H165 321 341 BCL11A B-cell lymphoma/leukemia 11A yes yes 3 0.00065961 73.597 By MS/MS By matching 1 1 26222000 11973000 14249000 1352 2813 1524 3552;3553 3512 3512 1114 5878;5879 1 ELALPLFSPATASR PPLVLPPKELALPLFS FSPATASRVPAMLPSL K E L S R V 3 1 0 0 0 0 1 0 0 0 3 0 0 1 2 2 1 0 0 0 0 0 14 0 1471.8035 Q5VWG9 Q5VWG9 660 673 TAF3 Transcription initiation factor TFIID subunit 3 yes yes 2 2.1493E-10 116.9 By MS/MS By matching 1 1 3946000 2478500 1467500 1353 2274 1525 3554;3555 3513 3513 7655 0 ELAQQVQQVADDYGK CLVLAPTRELAQQVQQ QVADDYGKCSRLKSTC R E L G K C 2 0 0 2 0 4 1 1 0 0 1 1 0 0 0 0 0 0 1 2 0 0 15 0 1690.8162 Q92841 Q92841 255 269 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 2 6.2592E-34 179.67 By MS/MS By MS/MS 1 1 19630000 9075000 10555000 1354 2604 1526 3556;3557 3514;3515 3515 2 ELDALDANDELTPLGR IEAEHTLRELDALDAN DELTPLGRILAKLPIE R E L G R I 2 1 1 3 0 0 2 1 0 0 4 0 0 0 1 0 1 0 0 0 0 0 16 0 1740.853 Q08211 Q08211 838 853 DHX9 ATP-dependent RNA helicase A yes yes 2 4.6372E-52 189.24 By MS/MS By MS/MS 1 1 23542000 10145000 13397000 1355 2012 1527 3558;3559 3516;3517 3517 2 ELDDATEANEGLSR ASRRKLQRELDDATEA EANEGLSREVSTLKNR R E L S R E 2 1 1 2 0 0 3 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 14 0 1518.6798 P35580 P35580 1906 1919 MYH10 Myosin-10 yes yes 2 0.023659 90.913 By MS/MS By MS/MS 1 1 0 0 0 1356 1796 1528 3560;3561 3518;3519 3519 2 ELDDDVTESVKDLLSNEDAADDAFK KNSKVVKRELDDDVTE DAADDAFKTSELIVDG R E L F K T 3 0 1 7 0 0 3 0 0 0 3 2 0 1 0 2 1 0 0 2 0 0 25 1 2753.2403 Q9H2J7;F8VSG1 Q9H2J7 11 35 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes no 3 6.4124E-05 78.352 By MS/MS By MS/MS 1 1 16346000 8241400 8104900 1357 2819 1529 3562;3563 3520;3521 3520 5903 2 ELDEEGSDPPLPGR QKAEALMRELDEEGSD SDPPLPGRAQRIRQVL R E L G R A 0 1 0 2 0 0 3 2 0 0 2 0 0 0 3 1 0 0 0 0 0 0 14 0 1509.6947 C9JQV0;Q9BRJ6;H7C0T1;H7C2R9 C9JQV0 169 182 C7orf50 Uncharacterized protein C7orf50 yes no 2 2.2425E-53 192.14 By MS/MS By MS/MS 1 1 90210000 46383000 43827000 1358 685 1530 3564;3565 3522;3523;3524;3525;3526;3527 3525 1261 6 ELDPSLVSANDSPSGMQTR NASPQKLRELDPSLVS SPSGMQTRCVWSPLAS R E L T R C 1 1 1 2 0 1 1 1 0 0 2 0 1 0 2 4 1 0 0 1 0 0 19 0 2002.9266 Q5UIP0;H7C2B5 Q5UIP0 2150 2168 RIF1 Telomere-associated protein RIF1 yes no 2;3 2.4755E-10 138.28 By MS/MS By MS/MS 3 4 300140000 150080000 150060000 1359 2261 1531;1532 3566;3567;3568;3569;3570;3571;3572 3528;3529;3530;3531;3532;3533;3534;3535 3529 902 4523;4524;7648 8 ELDQDMVTEDEDDPGSHK ESKDTEQKELDQDMVT EDDPGSHKRGRRGKRG K E L H K R 0 0 0 5 0 1 3 1 1 0 1 1 1 0 1 1 1 0 0 1 0 0 18 0 2058.8324 Q9NRL2;A0A087WWN7 Q9NRL2 724 741 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 3 0.022997 43.463 By matching By MS/MS 1 1 18167000 7487600 10679000 1360 2908 1533 3573;3574 3536 3536 1153 7875 1 ELDQDMVTEDEDDPGSHKR ESKDTEQKELDQDMVT DDPGSHKRGRRGKRGQ K E L K R G 0 1 0 5 0 1 3 1 1 0 1 1 1 0 1 1 1 0 0 1 0 0 19 1 2214.9335 Q9NRL2;A0A087WWN7 Q9NRL2 724 742 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 3 0.0001399 114.54 By MS/MS By MS/MS 2 1 71768000 47359000 24410000 1361 2908 1534;1535 3575;3576;3577 3537;3538;3539;3540 3538 1153 7875 4 ELEAIFGRPVVDGEEGEPHSISPR PIPPPDAKELEAIFGR EPHSISPRPRPPGRPV K E L P R P 1 2 0 1 0 0 5 3 1 2 1 0 0 1 3 2 0 0 0 2 0 0 24 1 2619.2929 G5E9C7;P36507 G5E9C7 177 200 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 3 5.6619E-06 108.09 By MS/MS By MS/MS 1 1 201820000 109820000 91999000 1362 1098 1536 3578;3579 3541;3542 3542 2072;2073 2 ELEDATETADAMNR ASRRKLQRELEDATET ETADAMNREVSSLKNK R E L N R E 3 1 1 2 0 0 3 0 0 0 1 0 1 0 0 0 2 0 0 0 0 0 14 0 1564.6675 P35579 P35579 1899 1912 MYH9 Myosin-9 yes yes 2 0.012506 79.23 By MS/MS By matching 1 1 7220300 3733300 3487000 1363 1795 1537 3580;3581 3543 3543 678 1 ELEEEEENSDEDELDSHTMVK KRHEEQQRELEEEEEN LDSHTMVKTSVESVGT R E L V K T 0 0 1 3 0 0 8 0 1 0 2 1 1 0 0 2 1 0 0 1 0 0 21 0 2506.0177 E5RFQ9;A0A087WZ06;Q13188 E5RFQ9 197 217 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes no 3 0.00064027 71.872 By MS/MS By MS/MS 1 1 24710000 11867000 12844000 1364 133 1538 3582;3583 3544;3545;3546 3545 220 3 ELEEIVQPIISK EDFKAKKKELEEIVQP IVQPIISKLYGSAGPP K E L S K L 0 0 0 0 0 1 3 0 0 3 1 1 0 0 1 1 0 0 0 1 0 0 12 0 1396.7813 P11021 P11021 622 633 HSPA5 78 kDa glucose-regulated protein yes yes 2 2.3865E-14 161.51 By MS/MS By MS/MS 1 1 12337000 4438300 7898900 1365 1679 1539 3584;3585 3547;3548 3548 2 ELEEIYMLPR LEEEERQKELEEIYML EEIYMLPRMRNCAKQI K E L P R M 0 1 0 0 0 0 3 0 0 1 2 0 1 0 1 0 0 0 1 0 0 0 10 0 1291.6482 O14646;A0A1B0GTU9;O14647 O14646 1063 1072 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 yes no 2 2.6394E-14 151.04 By MS/MS 1 0 0 0 1366 1452 1540 3586 3549 3549 514 8177 1 ELEENDSENSEFEDDGSEK LHENVLDKELEENDSE FEDDGSEKVLDEEGSE K E L E K V 0 0 2 3 0 0 7 1 0 0 1 1 0 1 0 3 0 0 0 0 0 0 19 0 2200.8404 O43719 O43719 591 609 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.019305 65.881 By MS/MS 1 0 0 0 1367 1505 1541 3587 3550 3550 2816;2817;2818 1 ELEFYLR DGYVLEGKELEFYLRK KELEFYLRKIKARKGK K E L L R K 0 1 0 0 0 0 2 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 7 0 968.49673 Q5JR95;P62241 Q5JR95 174 180 RPS8 40S ribosomal protein S8 yes no 2 0.00070515 125.86 By MS/MS By MS/MS 1 1 2063200 2063200 0 1368 1935 1542 3588;3589 3551;3552 3552 2 ELEKPIQSKPQSPVIQAAAVSPK NQVLQEARELEKPIQS QAAAVSPKFVRLKHSQ R E L P K F 3 0 0 0 0 3 2 0 0 2 1 3 0 0 4 3 0 0 0 2 0 0 23 2 2444.3639 Q9Y6D5 Q9Y6D5 207 229 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 3 1.5035E-05 97.23 By MS/MS By MS/MS 1 1 47324000 24308000 23016000 1369 3147 1543 3590;3591 3553;3554 3553 6732;6733;6734 2 ELEQHIQTSDPENFQSEER SSASVDNRELEQHIQT ENFQSEERSDSDVNND R E L E R S 0 1 1 1 0 3 5 0 1 1 1 0 0 1 1 2 1 0 0 0 0 0 19 0 2315.0302 Q96K76 Q96K76 925 943 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 3 0.010196 53.327 By MS/MS By matching 1 1 29717000 14974000 14743000 1370 2677 1544 3592;3593 3555 3555 5532 1 ELESPLTPGK KKKKESSKELESPLTP ESPLTPGKVCRAEEGK K E L G K V 0 0 0 0 0 0 2 1 0 0 2 1 0 0 2 1 1 0 0 0 0 0 10 0 1069.5655 O15014 O15014 740 749 ZNF609 Zinc finger protein 609 yes yes 2 0.017205 79.036 By MS/MS 1 4108700 0 4108700 1371 1466 1545 3594 3556 3556 1 ELEVLLMCNK KFLVHNVKELEVLLMC EVLLMCNKSYCAEIAH K E L N K S 0 0 1 0 1 0 2 0 0 0 3 1 1 0 0 0 0 0 0 1 0 0 10 0 1247.6254 D3YTB1;F8W727;P62910 D3YTB1 84 93 RPL32 60S ribosomal protein L32 yes no 2 0.0015758 136.27 By MS/MS By MS/MS 1 1 2327400 2327400 0 1372 723 1546 3595;3596 3557;3558 3557 2 ELFDDPSYVNVQNLDK PPPPCPGRELFDDPSY VNVQNLDKARQAVGGA R E L D K A 0 0 2 3 0 1 1 0 0 0 2 1 0 1 1 1 0 0 1 2 0 0 16 0 1894.8949 P29353;H0Y539;X6R6D0;Q5T188 P29353 420 435 SHC1 SHC-transforming protein 1 yes no 2;3 1.3895E-41 173.59 By MS/MS By MS/MS 2 2 287270000 163180000 124090000 1373 1774 1547 3597;3598;3599;3600 3559;3560;3561;3562 3559 8251 4 ELGPDGEEAEGPGAGDGPPRSFDWGYEER VSSSDRLRELGPDGEE FDWGYEERSGAHSSAS R E L E R S 2 2 0 3 0 0 6 7 0 0 1 0 0 1 4 1 0 1 1 0 0 0 29 1 3075.3119 P18615;A0A0A0MT02;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 145 173 NELFE Negative elongation factor E yes no 3 0.021704 42.472 By matching By MS/MS 1 1 21382000 10101000 11281000 1374 1726 1548 3601;3602 3563 3563 3248 1 ELGSPTDEDSGQDQQLLR PKAYDVERELGSPTDE GQDQQLLRGPQIPALE R E L L R G 0 1 0 3 0 3 2 2 0 0 3 0 0 0 1 2 1 0 0 0 0 0 18 0 1986.913 H0Y713;Q86YN6 H0Y713 208 225 PPARGC1B Peroxisome proliferator-activated receptor gamma coactivator 1-beta yes no 2 0.013463 63.681 By MS/MS By matching 1 1 17132000 8450800 8681100 1375 1138 1549 3603;3604 3564 3564 2163 1 ELGTGEQPLSPTTATSPYGGGHALAGQTSPK PTLRAPERELGTGEQP LAGQTSPKQENGTLAL R E L P K Q 3 0 0 0 0 2 2 6 1 0 3 1 0 0 4 3 5 0 1 0 0 0 31 0 3009.468 H7C3J6;A0A087WXB3;A0A087X223;H7BY14;A0A087WYU3;A0A087X1J5;A0A087WYW1;Q96NU1 H7C3J6 491 521 SAMD11 Sterile alpha motif domain-containing protein 11 yes no 3 0.014359 46.145 By matching By MS/MS 1 1 20551000 8859400 11692000 1376 103 1550 3605;3606 3565 3565 183;7988 1 ELGTVMR GDGTITTKELGTVMRS KELGTVMRSLGQNPTE K E L M R S 0 1 0 0 0 0 1 1 0 0 1 0 1 0 0 0 1 0 0 1 0 0 7 0 804.41637 P0DP25;P0DP24;P0DP23;E7ETZ0;H0Y7A7;E7EMB3;M0QZ52;F8WBR5;G3V479;C9J7T9;P27482;P02585 P0DP25 32 38 CALM1;CALM2;CALM3;TNNC2;CALML3 Calmodulin-like protein 3;Troponin C, skeletal muscle yes no 2 0.02637 58.981 By MS/MS 1 0 0 0 1377 788 1551 3607 3566 3566 295 1 ELHYLPFPSP PCLADGQKELHYLPFP HYLPFPSP________ K E L S P - 0 0 0 0 0 0 1 0 1 0 2 0 0 1 3 1 0 0 1 0 0 0 10 0 1198.6023 Q8N565 Q8N565 205 214 MREG Melanoregulin yes yes 2 7.8809E-14 152.54 By MS/MS 1 0 0 0 1378 2473 1552 3608 3567 3567 5057 1 ELIIGDR VPIGRGQRELIIGDRQ RELIIGDRQTGKTSIA R E L D R Q 0 1 0 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 7 0 814.45487 P25705;K7EK77;K7ENJ4 P25705 208 214 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 2 0.025398 128.86 By MS/MS By matching 1 1 20733000 10571000 10161000 1379 1764 1553 3609;3610 3568 3568 1 ELILGSETPSSPR LVLRPWIRELILGSET SETPSSPRAGQLLEDA R E L P R A 0 1 0 0 0 0 2 1 0 1 2 0 0 0 2 3 1 0 0 0 0 0 13 0 1384.7198 R4GNJ5;A0A0C4DGT6;Q96AP0 R4GNJ5 15 27 ACD Adrenocortical dysplasia protein homolog yes no 2 7.702E-10 138.55 By MS/MS By MS/MS 1 1 23338000 10603000 12734000 1380 327 1554 3611;3612 3569;3570 3569 573;574 2 ELIPQESPR GKVGPDGKELIPQESP LIPQESPRVGGFGFVA K E L P R V 0 1 0 0 0 1 2 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 9 0 1067.5611 Q96DF8 Q96DF8 286 294 DGCR14 Protein DGCR14 yes yes 2 0.008998 79.474 By MS/MS By MS/MS 1 1 38189000 20016000 18173000 1381 2636 1555 3613;3614 3571;3572 3572 5429 2 ELISNASDALDK SNKEIFLRELISNASD NASDALDKIRYESLTD R E L D K I 2 0 1 2 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1274.6354 P08238;P14625;F8W026;Q96GW1 P08238 42 53 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 2 1.4434E-25 174.98 By MS/MS By MS/MS 1 1 134420000 72124000 62296000 1382 1658;1701 1556 3615;3616 3573;3574 3574 2 ELISNASDALDKIR SNKEIFLRELISNASD SDALDKIRYESLTDPS R E L I R Y 2 1 1 2 0 0 1 0 0 2 2 1 0 0 0 2 0 0 0 0 0 0 14 1 1543.8206 P08238;P14625;F8W026;Q96GW1 P08238 42 55 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 3 0.0014588 101.43 By MS/MS By MS/MS 1 1 10188000 4443000 5745200 1383 1658;1701 1557 3617;3618 3575;3576 3576 2 ELKPQKSVVSDLEADDVK TSPKLSNKELKPQKSV DLEADDVKGSVPLSSS K E L V K G 1 0 0 3 0 1 2 0 0 0 2 3 0 0 1 2 0 0 0 3 0 0 18 2 1999.0474 P11388 P11388 1368 1385 TOP2A DNA topoisomerase 2-alpha yes yes 2;3 1.1785E-05 131.13 By MS/MS By MS/MS 2 2 84998000 40390000 44608000 1384 1682 1558 3619;3620;3621;3622 3577;3578;3579 3577 3169;3170 3 ELLAKPIGPDDAIDALSSDFTCGSPTAAGK VTIPPKYRELLAKPIG GSPTAAGKKTEKEEST R E L G K K 5 0 0 4 1 0 1 3 0 2 3 2 0 1 3 3 2 0 0 0 0 0 30 1 3016.4699 F8W7E0;E9PCH5 F8W7E0 268 297 CAST yes no 3 0.022362 41.758 By matching By MS/MS 1 1 50513000 32040000 18474000 1385 849 1559 3623;3624 3580 3580 1579 1 ELLDTSFEDLSKPK EPLESQDRELLDTSFE FEDLSKPKRKLADGRQ R E L P K R 0 0 0 2 0 0 2 0 0 0 3 2 0 1 1 2 1 0 0 0 0 0 14 1 1620.8247 P78345 P78345 230 243 RPP38 Ribonuclease P protein subunit p38 yes yes 2;3 5.2452E-32 175.01 By MS/MS By MS/MS 2 2 108530000 58006000 50526000 1386 1961 1560 3625;3626;3627;3628 3581;3582;3583;3584;3585 3584 7503 5 ELLHSVHPESPNLK QTDGILTKELLHSVHP HPESPNLKTSLCFKEQ K E L L K T 0 0 1 0 0 0 2 0 2 0 3 1 0 0 2 2 0 0 0 1 0 0 14 0 1598.8417 Q9Y217 Q9Y217 552 565 MTMR6 Myotubularin-related protein 6 yes yes 3 0.0034008 69.229 By MS/MS By MS/MS 1 1 44923000 18132000 26791000 1387 3081 1561 3629;3630 3586;3587 3587 6622 2 ELLIFNK VCSTNDLKELLIFNKQ KELLIFNKQQVPSGES K E L N K Q 0 0 1 0 0 0 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 7 0 875.51165 P09874 P09874 263 269 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0132 124.32 By MS/MS By MS/MS 1 1 2738100 0 2738100 1388 1665 1562 3631;3632 3588;3589 3589 2 ELLPTGSVADR E L D R 1 1 0 1 0 0 1 1 0 0 2 0 0 0 1 1 1 0 0 1 0 0 11 0 1156.6088 REV__Q92508 yes yes 2 0.0051609 96.113 By MS/MS By matching 2 1 10940000 8365100 2574600 + 1389 3220 1563 3633;3634;3635 3590 3590 7969 1 ELLSPLSEPDDRYPLIVK MFSPMEEKELLSPLSE DRYPLIVKIDLNLLTR K E L V K I 0 1 0 2 0 0 2 0 0 1 4 1 0 0 3 2 0 0 1 1 0 0 18 1 2083.1201 Q9UHB7 Q9UHB7 700 717 AFF4 AF4/FMR2 family member 4 yes yes 2;3 5.2461E-05 121.42 By MS/MS By MS/MS 4 4 150640000 83371000 67273000 1390 3004 1564;1565 3636;3637;3638;3639;3640;3641;3642;3643 3591;3592;3593;3594;3595;3596;3597;3598 3593 6328;6329 8 ELLVSQHTVQLVGGLSPLSSPSDTK PNTDADTRELLVSQHT LSSPSDTKAESPAEKV R E L T K A 0 0 0 1 0 2 1 2 1 0 5 1 0 0 2 5 2 0 0 3 0 0 25 0 2591.3806 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 405 429 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 5.9056E-15 139.51 By MS/MS By MS/MS 1 1 65900000 35227000 30673000 1391 810 1566 3644;3645 3599;3600;3601;3602 3602 1450 4 ELNFVTDSVEQELPSSPK GIIDDVMKELNFVTDS QELPSSPKQPICFDRQ K E L P K Q 0 0 1 1 0 1 3 0 0 0 2 1 0 1 2 3 1 0 0 2 0 0 18 0 2017.9844 B4DP81;Q8TAP6 B4DP81 68 85 CEP76 Centrosomal protein of 76 kDa yes no 2;3 0.0094187 66.977 By MS/MS By MS/MS 1 3 10545000 5283800 5260700 1392 555 1567 3646;3647;3648;3649 3603;3604;3605 3603 1031;1032 3 ELNFVTDSVEQELPSSPKQPICFDR GIIDDVMKELNFVTDS KQPICFDRQSTLKKSF K E L D R Q 0 1 1 2 1 2 3 0 0 1 2 1 0 2 3 3 1 0 0 2 0 0 25 1 2934.4069 B4DP81;Q8TAP6 B4DP81 68 92 CEP76 Centrosomal protein of 76 kDa yes no 3 1.7612E-21 150.91 By MS/MS 1 19801000 19801000 0 1393 555 1568 3650 3606;3607 3606 1031;1032 2 ELNVSFINEK LQRGYTAKELNVSFIN NVSFINEKKYHLQERV K E L E K K 0 0 2 0 0 0 2 0 0 1 1 1 0 1 0 1 0 0 0 1 0 0 10 0 1191.6136 P49585;C9JEJ2;C9J050;Q9Y5K3 P49585 229 238 PCYT1A;PCYT1B Choline-phosphate cytidylyltransferase A;Choline-phosphate cytidylyltransferase B yes no 2 0.01691 67.494 By MS/MS 1 3988900 0 3988900 1394 1856 1569 3651 3608 3608 3571 1 ELPMASAYCNDSIFAYEELRLDSFKDWPR FVNSWVQRELPMASAY DSFKDWPRESAVGVAA R E L P R E 3 2 1 3 1 0 3 0 0 1 3 1 1 2 2 3 0 1 2 0 0 0 29 2 3522.6224 A0A0G2JQE0;A0A0G2JNC7;E7EQW0;B7ZLE8;A0A0G2JS53;Q13075 A0A0G2JQE0 100 128 NAIP Baculoviral IAP repeat-containing protein 1 yes no 3 0.027344 44.3 By MS/MS 1 7860200 7860200 0 1395 359 1570 3652 3609 3609 141 644 0 ELPPAAAIGATSLVAAPHSSSSSPSKDSSR RRPGNEERELPPAAAI SPSKDSSRGETEERKD R E L S R G 6 1 0 1 0 0 1 1 1 1 2 1 0 0 4 9 1 0 0 1 0 0 30 1 2877.4468 H0Y7I9;C9IZ08;Q14C86;H0Y4E7;F8W9S7 H0Y7I9 765 794 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 3;4 6.4827E-07 79.382 By MS/MS By MS/MS 2 2 73271000 40238000 33033000 1396 617 1571 3653;3654;3655;3656 3610;3611;3612;3613;3614 3613 1124;1125;1126;1127;1128 5 ELPPLSPSLSR RRGLDSMRELPPLSPS PLSPSLSRRALSPLPT R E L S R R 0 1 0 0 0 0 1 0 0 0 3 0 0 0 3 3 0 0 0 0 0 0 11 0 1194.6608 Q86UU1 Q86UU1 456 466 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 2 0.0048943 81.676 By MS/MS By MS/MS 1 1 11266000 7020800 4245100 1397 2404 1572 3657;3658 3615;3616 3615 4905;4906 2 ELPSLSPAPDTGLSPSKR LKPAHRKRELPSLSPA TGLSPSKRTHQRSKSD R E L K R T 1 1 0 1 0 0 1 1 0 0 3 1 0 0 4 4 1 0 0 0 0 0 18 1 1850.9738 A0A0B4J1S8;Q9UBF8;A0A0A0MSL0 A0A0B4J1S8 265 282 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 0.00077728 78.249 By MS/MS By MS/MS 1 1 15753000 8876800 6875800 1398 287 1573 3659;3660 3617;3618 3617 508 2 ELPTVTTNVQNSQDK VALALSVKELPTVTTN NVQNSQDKSIEKHGSS K E L D K S 0 0 2 1 0 2 1 0 0 0 1 1 0 0 1 1 3 0 0 2 0 0 15 0 1672.8268 F5H1Y0;H0YGT5;Q96B01 F5H1Y0 92 106 RAD51AP1 RAD51-associated protein 1 yes no 2 0.021221 63.546 By MS/MS By matching 1 1 12872000 8086900 4785400 1399 964 1574 3661;3662 3619 3619 1815 1 ELQEDARIRGMSNCSMTPMTSAPR TVFKDIQKELQEDARI TPMTSAPRTGSIRPPD K E L P R T 2 3 1 1 1 1 2 1 0 1 1 0 3 0 2 3 2 0 0 0 0 0 24 2 2737.2404 Q6X4T0 Q6X4T0 56 79 C12orf54 Uncharacterized protein C12orf54 yes yes 3 0.0059957 54.271 By MS/MS 1 8104900 0 8104900 1400 2347 1575 3663 3620 3620 945 4763;7675 1 ELQGDGPPSSPTNDPTVK RKYKKKKKELQGDGPP PTNDPTVKYETQPRFI K E L V K Y 0 0 1 2 0 1 1 2 0 0 1 1 0 0 4 2 2 0 0 1 0 0 18 0 1837.8694 Q12873 Q12873 704 721 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 2 0.0098736 66.606 By matching By MS/MS 1 1 35468000 19133000 16335000 1401 2030 1576 3664;3665 3621 3621 3946;3947 1 ELQQELQEYEVVTESEKR EDSADWEKELQQELQE VVTESEKRDENWDKEI K E L K R D 0 1 0 0 0 3 6 0 0 0 2 1 0 0 0 1 1 0 1 2 0 0 18 1 2236.0859 Q96A49 Q96A49 319 336 SYAP1 Synapse-associated protein 1 yes yes 3 0.00017728 95.073 By MS/MS By MS/MS 1 1 107860000 69008000 38853000 1402 2617 1577 3666;3667 3622;3623 3623 8416 2 ELSDQATASPIVAR DSLDSKGKELSDQATA TASPIVARTDLSNIPG K E L A R T 3 1 0 1 0 1 1 0 0 1 1 0 0 0 1 2 1 0 0 1 0 0 14 0 1456.7522 Q5JSH3 Q5JSH3 88 101 WDR44 WD repeat-containing protein 44 yes yes 2 1.2894E-66 206.49 By MS/MS By MS/MS 1 1 80997000 44193000 36804000 1403 2219 1578 3668;3669 3624;3625 3625 4433;7633 2 ELSDSCEGAFGGGR GSDVTSGKELSDSCEG EGAFGGGRLEGRAARK K E L G R L 1 1 0 1 1 0 2 4 0 0 1 0 0 1 0 2 0 0 0 0 0 0 14 0 1440.594 F8W9F9;H0Y7T5;Q9Y3S1;H0Y7R3 F8W9F9 1148 1161 WNK2 Serine/threonine-protein kinase WNK2 yes no 2 0.00636 77.744 By MS/MS By MS/MS 1 1 10185000 5062600 5122700 1404 1040 1579 3670;3671 3626;3627 3626 1963 2 ELSEESEDEELQLEEFPMLK FQELEDKKELSEESED LEEFPMLKTLDPKDWK K E L L K T 0 0 0 1 0 1 8 0 0 0 4 1 1 1 1 2 0 0 0 0 0 0 20 0 2423.0938 F2Z3H0;F2Z3N9;H7C3L7;Q99543 F2Z3H0 58 77 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 2 0.0015776 66.152 By MS/MS By MS/MS 1 2 26165000 11408000 14756000 1405 936 1580 3672;3673;3674 3628;3629 3628 349 1753;1754 2 ELSESVQQQSTPVPLISPK SKAEMDLKELSESVQQ PVPLISPKRQIRSRFQ K E L P K R 0 0 0 0 0 3 2 0 0 1 2 1 0 0 3 4 1 0 0 2 0 0 19 0 2066.0895 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 458 476 ZMYND8 Protein kinase C-binding protein 1 yes no 2;3 0.00020205 100.07 By MS/MS By MS/MS 2 2 109370000 63120000 46248000 1406 82 1581 3675;3676;3677;3678 3630;3631;3632;3633;3634 3632 141 5 ELSESVQQQSTPVPLISPKR SKAEMDLKELSESVQQ VPLISPKRQIRSRFQL K E L K R Q 0 1 0 0 0 3 2 0 0 1 2 1 0 0 3 4 1 0 0 2 0 0 20 1 2222.1907 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 458 477 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.021153 47.546 By MS/MS By matching 1 1 20252000 10651000 9601100 1407 82 1582 3679;3680 3635 3635 141 1 ELSLAGNELGDEGAR LRAKESLKELSLAGNE ELGDEGARLLCETLLE K E L A R L 2 1 1 1 0 0 3 3 0 0 3 0 0 0 0 1 0 0 0 0 0 0 15 0 1529.7322 H0YCR7;P13489 H0YCR7 82 96 RNH1 Ribonuclease inhibitor yes no 2 0.031697 91.093 By MS/MS 1 0 0 0 1408 1170 1583 3681 3636 3636 1 ELSNSPLR PHFSPEHKELSNSPLR ELSNSPLRENSFGSPL K E L L R E 0 1 1 0 0 0 1 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 8 0 914.48214 Q9UQ35 Q9UQ35 1316 1323 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0097198 94.409 By MS/MS 1 219790000 219790000 0 1409 3074 1584 3682 3637 3637 6515;6516 1 ELSNSPLRENSFGSPLEFR PHFSPEHKELSNSPLR FGSPLEFRNSGPLGTE K E L F R N 0 2 2 0 0 0 3 1 0 0 3 0 0 2 2 4 0 0 0 0 0 0 19 1 2178.0705 Q9UQ35 Q9UQ35 1316 1334 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.00035785 104.68 By MS/MS By MS/MS 9 9 1368500000 752990000 615520000 1410 3074 1585;1586;1587;1588;1589 3683;3684;3685;3686;3687;3688;3689;3690;3691;3692;3693;3694;3695;3696;3697;3698;3699;3700 3638;3639;3640;3641;3642;3643;3644;3645;3646;3647;3648;3649;3650;3651 3646 148 6515;6516;6517;6518 14 ELSPAALEKR ARGQGSAKELSPAALE SPAALEKRRRRKQERD K E L K R R 2 1 0 0 0 0 2 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 1 1112.619 O75683 O75683 136 145 SURF6 Surfeit locus protein 6 yes yes 2;3 0.011967 66.663 By MS/MS By MS/MS 2 2 45468000 19294000 26174000 1411 1552 1590 3701;3702;3703;3704 3652;3653;3654 3654 2939 3 ELSPAGSISK KKLKRMKKELSPAGSI SPAGSISKNSPATLFE K E L S K N 1 0 0 0 0 0 1 1 0 1 1 1 0 0 1 3 0 0 0 0 0 0 10 0 987.52368 O95453 O95453 617 626 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.0036738 86.463 By MS/MS By MS/MS 1 1 179640000 98908000 80730000 1412 1597 1591 3705;3706 3655;3656 3655 3027 2 ELSPEGPGKEK ESISSIDRELSPEGPG PEGPGKEKELPGQTLH R E L E K E 0 0 0 0 0 0 3 2 0 0 1 2 0 0 2 1 0 0 0 0 0 0 11 1 1169.5928 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YCG0 A0A0G2JNZ2 1230 1240 SCRIB Protein scribble homolog yes no 2 1.945E-05 137.4 By matching By MS/MS 1 1 11834000 6324600 5508900 1413 361 1592 3707;3708 3657 3657 649 1 ELSPLISLPSPVPPLSPIHSNQQTLPR VTDSAPERELSPLISL SNQQTLPRTQGSSKVH R E L P R T 0 1 1 0 0 2 1 0 1 2 5 0 0 0 7 5 1 0 0 1 0 0 27 0 2916.6073 E7ETI4;E7EMC5;F5GXF9;P51825 E7ETI4 204 230 AFF1 AF4/FMR2 family member 1 yes no 3 2.6701E-05 78.254 By MS/MS By MS/MS 1 1 29478000 18217000 11261000 1414 789 1593 3709;3710 3658;3659 3659 1404;1405;1406 2 ELSPMQQELCDEK E L E K 0 0 0 1 1 2 3 0 0 0 2 1 1 0 1 1 0 0 0 0 0 0 13 0 1605.7015 REV__G3V419 yes no 2 0.0038419 94.402 By MS/MS 1 71669000 71669000 0 + 1415 3184 1594 3711 3660 3660 6779 1 ELSQNTDESGLNDEAIAK KMVASKRKELSQNTDE LNDEAIAKQLQLDEDA K E L A K Q 2 0 2 2 0 1 3 1 0 1 2 1 0 0 0 2 1 0 0 0 0 0 18 0 1932.8912 P35251 P35251 188 205 RFC1 Replication factor C subunit 1 yes yes 2 0.0065823 69.289 By MS/MS 1 7309100 7309100 0 1416 1793 1595 3712 3661 3661 3380 1 ELSRKHMSPQPSLAGTQPLQETK PVLPCCQKELSRKHMS TQPLQETKLPPTDHRT K E L T K L 1 1 0 0 0 3 2 1 1 0 3 2 1 0 3 3 2 0 0 0 0 0 23 2 2562.3224 E9PPM1 E9PPM1 193 215 TP53I11 yes yes 3 0.026486 53.059 By MS/MS 1 0 0 0 1417 923 1596 3713 3662 3662 1720;1721 1 ELSTSPCNPIVR DRILKTSRELSTSPCN SPCNPIVRQKESELQM R E L V R Q 0 1 1 0 1 0 1 0 0 1 1 0 0 0 2 2 1 0 0 1 0 0 12 0 1371.6816 Q9H2Y7;H3BNX5 Q9H2Y7 637 648 ZNF106 Zinc finger protein 106 yes no 2 0.0015806 90.731 By matching By MS/MS 1 1 59880000 28324000 31556000 1418 2824 1597 3714;3715 3663 3663 5919 1 ELSVQDQPSLSPTSLQNSSSHTTTAK ALADLIEKELSVQDQP SSHTTTAKGPGSGFLH K E L A K G 1 0 1 1 0 3 1 0 1 0 3 1 0 0 2 7 4 0 0 1 0 0 26 0 2742.3308 O95628 O95628 422 447 CNOT4 CCR4-NOT transcription complex subunit 4 yes yes 3 2.1633E-07 96.777 By MS/MS By MS/MS 1 1 58323000 31406000 26916000 1419 1602 1598 3716;3717 3664;3665 3665 3037 2 ELTCQILEQKIKELDSCLVR VQKTLQEKELTCQILE ELDSCLVRQKEVHRVE K E L V R Q 0 1 0 1 2 2 3 0 0 2 4 2 0 0 0 1 1 0 0 1 0 0 20 2 2474.2873 Q13439;H0Y6I0 Q13439 1846 1865 GOLGA4 Golgin subfamily A member 4 yes no 3 0.028676 40.492 By MS/MS 1 3765600 3765600 0 1420 2060 1599 3718 3666 3666 1 ELTDEEAER ETSGPQIKELTDEEAE LTDEEAERLQLEIDQK K E L E R L 1 1 0 1 0 0 4 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 9 0 1090.4778 A0A0A0MSS4;A0A0A0MSU9;Q9Y266 A0A0A0MSS4 57 65 NUDC Nuclear migration protein nudC yes no 2 0.010249 91.069 By MS/MS By MS/MS 1 1 9638100 6362100 3276000 1421 258 1600 3719;3720 3667;3668 3668 6906 1 ELTNRHSLPFSLPSQMEPRPDVPR SSDPWTGRELTNRHSL EPRPDVPRLGSTFSLD R E L P R L 0 3 1 1 0 1 2 0 1 0 3 0 1 1 5 3 1 0 0 1 0 0 24 2 2802.4235 P22681;A0A0U1RR39;A0A1B0GW38;A0A0U1RQX8 P22681 613 636 CBL E3 ubiquitin-protein ligase CBL yes no 4 0.030594 42.123 By MS/MS 1 7168300 7168300 0 1422 1751 1601 3721 3669 3669 1 ELTPASPTCTNSVSK APGLPNGRELTPASPT TCTNSVSKNETHAEVL R E L S K N 1 0 1 0 1 0 1 0 0 0 1 1 0 0 2 3 3 0 0 1 0 0 15 0 1590.7559 R4GMW8;P28715 R4GMW8 947 961 BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells yes no 2 0.0014543 90.697 By MS/MS By MS/MS 1 1 30018000 14689000 15329000 1423 3158 1602 3722;3723 3670;3671 3670 6753 2 ELVEPLTPSGEAPNQALLR LRRLLQERELVEPLTP APNQALLRILKETEFK R E L L R I 2 1 1 0 0 1 3 1 0 0 4 0 0 0 3 1 1 0 0 1 0 0 19 0 2033.0793 Q504U8;E9PFD7;P00533 Q504U8 642 660 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor yes no 2 0.00060147 117.27 By MS/MS By MS/MS 1 1 70888000 34883000 36005000 1424 864 1603 3724;3725 3672;3673 3673 7105 2 ELVGPPLAETVFTPK QNLNPSNKELVGPPLA AETVFTPKTSPENVQD K E L P K T 1 0 0 0 0 0 2 1 0 0 2 1 0 1 3 0 2 0 0 2 0 0 15 0 1596.8763 P49792 P49792 1384 1398 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.017377 74.611 By matching By MS/MS 1 1 12400000 8948700 3451700 1425 1860 1604 3726;3727 3674 3674 7473;7474 0 ELVGPPLAETVFTPKTSPENVQDR QNLNPSNKELVGPPLA SPENVQDRFALVTPKK K E L D R F 1 1 1 1 0 1 3 1 0 0 2 1 0 1 4 1 3 0 0 3 0 0 24 1 2623.3493 P49792 P49792 1384 1407 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 3 0.00016735 77.681 By MS/MS By MS/MS 1 1 45281000 22494000 22787000 1426 1860 1605 3728;3729 3675;3676 3676 3601;7473;7474;7475 2 ELVLSSPEDLTQDFEEMKR LPTISGHRELVLSSPE QDFEEMKREERALLAE R E L K R E 0 1 0 2 0 1 4 0 0 0 3 1 1 1 1 2 1 0 0 1 0 0 19 1 2265.0835 E9PGC8;P78559 E9PGC8 760 778 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 3 3.6893E-11 141.1 By MS/MS By MS/MS 1 1 25751000 13995000 11757000 1427 872 1606 3730;3731 3677;3678;3679 3677 329 1604;1605 3 ELVSSKVSGAQEMVSSAK EKVLADTKELVSSKVS QEMVSSAKDTVATQL_ K E L A K D 2 0 0 0 0 1 2 1 0 0 1 2 1 0 0 5 0 0 0 3 0 0 18 1 1835.9299 K7ER39;K7EL96;K7ERZ3;O60664 K7ER39 144 161 PLIN3 Perilipin-3 yes no 2 0.014314 65.924 By MS/MS By matching 1 1 11566000 6169000 5397200 1428 1380 1607 3732;3733 3680 3680 481 2546 1 ELWSPIQQVTATSSK GELRGPGKELWSPIQQ QVTATSSKWAQFVLPP K E L S K W 1 0 0 0 0 2 1 0 0 1 1 1 0 0 1 3 2 1 0 1 0 0 15 0 1673.8625 A0A087WZ47;E5RJC6;Q6NTE8 A0A087WZ47 29 43 C5orf45 UPF0544 protein C5orf45 yes no 2 0.0081623 74.141 By MS/MS 1 2998400 0 2998400 1429 137 1608 3734 3681 3681 225 1 EMDTARTPLSEAEFEEIMNR GDYGPPGREMDTARTP EFEEIMNRNRAISSSA R E M N R N 2 2 1 1 0 0 5 0 0 1 1 0 2 1 1 1 2 0 0 0 0 0 20 1 2368.0675 F8WJN3;Q16630 F8WJN3 328 347 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 3 0.0059595 75.215 By MS/MS 1 0 0 0 1430 1059 1609 3735 3682 3682 7169 1 EMEENFAVEAANYQDTIGR ESLERQMREMEENFAV NYQDTIGRLQDEIQNM R E M G R L 3 1 2 1 0 1 4 1 0 1 0 0 1 1 0 0 1 0 1 1 0 0 19 0 2185.9586 P08670;B0YJC4;B0YJC5 P08670 346 364 VIM Vimentin yes no 2 2.3144E-56 186.08 By MS/MS By MS/MS 1 1 18727000 6435800 12292000 1431 1663 1610 3736;3737 3683;3684 3684 614 2 EMEHNTVCAAGTSPVGEIGEEK INNHLIAKEMEHNTVC VGEIGEEKILPTSETK K E M E K I 2 0 1 0 1 0 5 3 1 1 0 1 1 0 1 1 2 0 0 2 0 0 22 0 2344.0311 P18583;H7C1M2 P18583 1544 1565 SON Protein SON yes no 2;3 4.9991E-61 188.86 By MS/MS By MS/MS 3 3 326320000 148750000 177580000 1432 1725 1611;1612 3738;3739;3740;3741;3742;3743 3685;3686;3687;3688;3689 3688 643 3241;7404 5 EMFPYEASTPTGISASCR RVERDILKEMFPYEAS TGISASCRRPIKGAAG K E M C R R 2 1 0 0 1 0 2 1 0 1 0 0 1 1 2 3 2 0 1 0 0 0 18 0 2002.8765 G5E972;P42167;H0YJH7 G5E972 307 324 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2 3.4143E-33 170.09 By MS/MS By MS/MS 2 2 59553000 34744000 24809000 1433 1097 1613;1614 3744;3745;3746;3747 3690;3691;3692;3693;3694;3695 3691 392 2060;7182 6 EMLASDDEEDVSSK ISQKAEIKEMLASDDE DEEDVSSKVEKAYVPK K E M S K V 1 0 0 3 0 0 3 0 0 0 1 1 1 0 0 3 0 0 0 1 0 0 14 0 1553.6403 E7ETM8;E7EUA0;Q0ZGT2 E7ETM8 12 25 NEXN Nexilin yes no 2 0.00083338 99.927 By MS/MS By MS/MS 2 2 40167000 15158000 25009000 1434 820 1615;1616 3748;3749;3750;3751 3696;3697;3698 3698 308 1489 3 EMLMEDVGSEEEQEEEDEAPFQEK SKAASKQREMLMEDVG DEAPFQEKDSGSDEDF R E M E K D 1 0 0 2 0 2 10 1 0 0 1 1 2 1 1 1 0 0 0 1 0 0 24 0 2856.1477 Q9H1E3 Q9H1E3 105 128 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 2.8743E-54 168.45 By MS/MS By MS/MS 2 3 0 0 0 1435 2816 1617;1618;1619 3752;3753;3754;3755;3756 3699;3700;3701;3702;3703 3699 1115;1116 5892 5 EMLWGSSTQLASDGSPK DLNPPSVREMLWGSST LASDGSPKGSSPESYI R E M P K G 1 0 0 1 0 1 1 2 0 0 2 1 1 0 1 4 1 1 0 0 0 0 17 0 1792.8302 A0A0J9YW64;A6NIW2;Q5JSL3 A0A0J9YW64 242 258 DOCK11 Dedicator of cytokinesis protein 11 yes no 2 4.6208E-05 119.21 By MS/MS By MS/MS 1 1 19659000 9680100 9979200 1436 370 1620 3757;3758 3704;3705 3704 148 680;681 2 EMPQDLRSPAR FEAAATGKEMPQDLRS QDLRSPARTPPSEEDS K E M A R T 1 2 0 1 0 1 1 0 0 0 1 0 1 0 2 1 0 0 0 0 0 0 11 1 1298.6401 O43765;K7EMD6 O43765 70 80 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 3 0.025227 54.784 By matching By MS/MS 1 1 30056000 16388000 13668000 1437 1508 1621 3759;3760 3706 3706 545 2834 1 EMQFLMQKWAGNSK LNPVKDSKEMQFLMQK QKWAGNSKAKTGIVLP K E M S K A 1 0 1 0 0 2 1 1 0 0 1 2 2 1 0 1 0 1 0 0 0 0 14 1 1696.8065 E9PGC8;P78559 E9PGC8 449 462 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.030974 49.482 By MS/MS 1 0 0 0 1438 872 1622 3761 3707 3707 330 1 EMQTTLKSSERSSSTSAESHIQPVQK NKSNSAYKEMQTTLKS SHIQPVQKKSKNRTNC K E M Q K K 1 1 0 0 0 3 3 0 1 1 1 2 1 0 1 7 3 0 0 1 0 0 26 2 2875.3982 Q8IWA6 Q8IWA6 339 364 CCDC60 Coiled-coil domain-containing protein 60 yes yes 3 0.01075 51.526 By MS/MS 1 20153000 0 20153000 1439 2428 1623 3762 3708;3709 3708 982 7708 2 EMWISSFEQSKK TPPLSSLREMWISSFE SSFEQSKKEAQALRWL R E M K K E 0 0 0 0 0 1 2 0 0 1 0 2 1 1 0 3 0 1 0 0 0 0 12 1 1498.7126 Q6P4F1 Q6P4F1 441 452 FUT10 Alpha-(1,3)-fucosyltransferase 10 yes yes 2 0.0096604 78.113 By MS/MS 1 0 0 0 1440 2319 1624 3763 3710 3710 4678 1 ENAAAPSPVRAPAPSPAKEER DSAPATAKENAAAPSP PSPAKEERKTEVVMNS K E N E R K 6 2 1 0 0 0 3 0 0 0 0 1 0 0 5 2 0 0 0 1 0 0 21 2 2144.0974 O75781 O75781 110 130 PALM Paralemmin-1 yes yes 3 0.019338 55.907 By MS/MS By matching 1 1 11144000 2688500 8455100 1441 1556 1625 3764;3765 3711 3711 2942;2943 0 ENAEVDGDDDAEEMEAK RQMERLERENAEVDGD DAEEMEAKAED_____ R E N A K A 3 0 1 4 0 0 5 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 17 0 1865.7109 P05198 P05198 296 312 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 2 0.029268 66.784 By matching By MS/MS 1 1 15172000 9565200 5606800 1442 1640 1626 3766;3767 3712 3712 593 1 ENASPAPGTTAEEAMSR RASPEPQRENASPAPG TAEEAMSRGPPPAPEG R E N S R G 4 1 1 0 0 0 3 1 0 0 0 0 1 0 2 2 2 0 0 0 0 0 17 0 1717.7577 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;H0Y710 A0A0G2JL47 964 980 BAT3;BAG6 Large proline-rich protein BAG6 yes no 2;3 3.4703E-23 160.64 By MS/MS By MS/MS 3 2 301050000 188500000 112560000 1443 6 1627;1628 3768;3769;3770;3771;3772 3713;3714;3715;3716 3716 1 9 4 ENCMRLGLMSYSNSAK ITSSMDVKENCMRLGL MSYSNSAKTISFLKSS K E N A K T 1 1 2 0 1 0 1 1 0 0 2 1 2 0 0 3 0 0 1 0 0 0 16 1 1859.8328 E9PAL5;A8TX70 E9PAL5 269 284 COL6A5 Collagen alpha-5(VI) chain yes no 2 0.027955 53.861 By MS/MS 1 0 0 0 1444 508 1629 3773 3717 3717 926;927;928 1 ENDIKPLTSFR DGTELELKENDIKPLT IKPLTSFRQRKGGSTS K E N F R Q 0 1 1 1 0 0 1 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 11 1 1318.6881 C9JXK0;Q14739 C9JXK0 51 61 LBR Lamin-B receptor yes no 3 0.0062138 70.68 By MS/MS By MS/MS 1 1 10793000 6118200 4675100 1445 700 1630 3774;3775 3718;3719 3719 7043 2 ENDMSPSNNVVPIHVPPTTENKPK QKQMSDRRENDMSPSN PTTENKPKVQCCQNI_ R E N P K V 0 0 4 1 0 0 2 0 1 1 0 2 1 0 5 2 2 0 0 3 0 0 24 1 2643.2963 B4DQU5;H3BSC1;P62491 B4DQU5 116 139 RAB11A Ras-related protein Rab-11A yes no 3 0.0019763 65.454 By MS/MS 1 8509900 0 8509900 1446 558 1631 3776 3720 3720 222 1035;1036 1 ENDYESISDLQQGR GHHGLVPKENDYESIS ISDLQQGRDITRL___ K E N G R D 0 1 1 2 0 2 2 1 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1652.7278 Q9NWQ8 Q9NWQ8 414 427 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2;3 4.3833E-66 203.61 By MS/MS By MS/MS 2 2 189510000 99675000 89832000 1447 2936 1632 3777;3778;3779;3780 3721;3722;3723;3724;3725;3726 3723 6190;8474 6 ENEEPGILVATKDGLKLGSGPSIK ATLIYVDKENEEPGIL LGSGPSIKALDGRSQV K E N I K A 1 0 1 1 0 0 3 4 0 2 3 3 0 0 2 2 1 0 0 1 0 0 24 2 2451.3221 Q9NZH4 Q9NZH4 10 33 PTTG3P Putative pituitary tumor-transforming gene 3 protein yes yes 3 0.02953 51.175 By matching By MS/MS 1 1 73185000 40733000 32452000 1448 2958 1633 3781;3782 3727 3727 1 ENEHIFNLGEEDETYGPGESQITAQSR PLIMPRNRENEHIFNL SQITAQSRELLKDSPQ R E N S R E 1 1 2 1 0 2 6 3 1 2 1 0 0 1 1 2 2 0 1 0 0 0 27 0 3049.3537 A0A0U1RQJ2 A0A0U1RQJ2 303 329 yes yes 3 0.00055126 66.372 By MS/MS By MS/MS 1 1 9736900 9736900 0 1449 382 1634;1635 3783;3784 3728;3729;3730 3729 14 8039 3 ENFSPER QPRPSANRENFSPERF RENFSPERFLPLNIRN R E N E R F 0 1 1 0 0 0 2 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 7 0 877.393 Q7Z6E9;H3BSK8 Q7Z6E9 858 864 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2 0.026435 82.029 By MS/MS By MS/MS 1 1 76650000 41150000 35501000 1450 2393 1636 3785;3786 3731;3732 3732 4875 2 ENGLFSHSSLSNTSQKSLSVK GESSVERKENGLFSHS SQKSLSVKEVKSFTQI K E N V K E 0 0 2 0 0 1 1 1 1 0 3 2 0 1 0 7 1 0 0 1 0 0 21 1 2249.1288 H3BLS7;Q5THJ4 H3BLS7 413 433 VPS13D Vacuolar protein sorting-associated protein 13D yes no 2 0.027713 49.924 By MS/MS 1 0 0 0 1451 1222 1637 3787 3733 3733 2283;2284;2285 1 ENIEGAQDATENSASSLAPGFIR LKKQVENKENIEGAQD SLAPGFIRGAQASSGS K E N I R G 4 1 2 1 0 1 3 2 0 2 1 0 0 1 1 3 1 0 0 0 0 0 23 0 2376.1193 P42684 P42684 590 612 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2;3 3.5094E-05 106.43 By MS/MS By matching 2 1 31910000 23450000 8459700 1452 1828 1638 3788;3789;3790 3734;3735 3735 3445 2 ENIKPNETSPSFSK QNSPAGNKENIKPNET ETSPSFSKAENKGISP K E N S K A 0 0 2 0 0 0 2 0 0 1 0 2 0 1 2 3 1 0 0 0 0 0 14 1 1576.7733 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700;F8W0B5 H0YH87 685 698 ATXN2 Ataxin-2 no no 2;3 0.0077862 96.334 By MS/MS By MS/MS 2 2 63731000 32807000 30924000 1453 1002;1029 1639 3791;3792;3793;3794 3736;3737;3738 3737 1888 3 ENLAESSKPTAGGSRSQK LSPLSLGKENLAESSK AGGSRSQKVKVAQRSP K E N Q K V 2 1 1 0 0 1 2 2 0 0 1 2 0 0 1 4 1 0 0 0 0 0 18 2 1845.9181 P49454 P49454 3126 3143 CENPF Centromere protein F yes yes 2 0.032046 52.731 By MS/MS 1 0 0 0 1454 1854 1640 3795 3739 3739 1 ENLPSDYMVPIFSGRQK SLLSGEEKENLPSDYM PIFSGRQKHVSGITDT K E N Q K H 0 1 1 1 0 1 1 1 0 1 1 1 1 1 2 2 0 0 1 1 0 0 17 1 1979.9775 P52179 P52179 130 146 MYOM1 Myomesin-1 yes yes 2 0.030171 44.829 By MS/MS 1 0 0 0 1455 1884 1641 3796 3740 3740 737 1 ENMPKNVLPDSQQQYNVVKTVK SVALPPIKENMPKNVL YNVVKTVKVTEQLRHC K E N V K V 0 0 3 1 0 3 1 0 0 0 1 3 1 0 2 1 1 0 1 4 0 0 22 2 2558.3163 C9JJU3;Q58F21 C9JJU3 247 268 BRDT Bromodomain testis-specific protein yes no 2 0.017715 44.44 By MS/MS By matching 1 1 27654000 9451200 18203000 1456 669 1642 3797;3798 3741 3741 262 1239 1 ENPLSSLNEPPK EITSHDVRENPLSSLN SSLNEPPKPGMKACGA R E N P K P 0 0 2 0 0 0 2 0 0 0 2 1 0 0 3 2 0 0 0 0 0 0 12 0 1323.667 A0A0U1RQK4 A0A0U1RQK4 1094 1105 yes yes 2 0.026136 48.602 By MS/MS 1 0 0 0 1457 383 1643 3799 3742 3742 706;707 1 ENPPVEDSSDEDDKR YLGDDMKRENPPVEDS SSDEDDKRNQGNLYDK R E N K R N 0 1 1 4 0 0 3 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 15 1 1730.7231 Q8TCJ2 Q8TCJ2 491 505 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2;3 0.00021624 116 By MS/MS By MS/MS 3 3 97418000 55779000 41639000 1458 2537 1644;1645 3800;3801;3802;3803;3804;3805 3743;3744;3745;3746 3745 5179;5180 3 ENQATASMMRKQMLSK E N S K 2 1 1 0 0 2 1 0 0 0 1 2 3 0 0 2 1 0 0 0 0 0 16 2 1852.8958 REV__Q9Y5X2 yes yes 2 0.018384 56.551 By MS/MS By MS/MS 1 1 491810000 285510000 206300000 + 1459 3227 1646 3806;3807 3747;3748 3748 6823 1 ENQPENSQTPTKK VASFLLSKENQPENSQ NSQTPTKKEHQKAWAL K E N K K E 0 0 2 0 0 2 2 0 0 0 0 2 0 0 2 1 2 0 0 0 0 0 13 1 1499.7216 Q12834 Q12834 98 110 CDC20 Cell division cycle protein 20 homolog yes yes 2 0.0075372 74.678 By matching By MS/MS 1 1 44109000 23615000 20493000 1460 2027 1647 3808;3809 3749 3749 7534 1 ENSFGSPLEFR ELSNSPLRENSFGSPL FGSPLEFRNSGPLGTE R E N F R N 0 1 1 0 0 0 2 1 0 0 1 0 0 2 1 2 0 0 0 0 0 0 11 0 1281.599 Q9UQ35 Q9UQ35 1324 1334 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.00093265 107.39 By MS/MS By MS/MS 5 5 441370000 222590000 218780000 1461 3074 1648;1649;1650 3810;3811;3812;3813;3814;3815;3816;3817;3818;3819 3750;3751;3752;3753;3754;3755;3756;3757 3753 148 6517;6518 8 ENSPNSFPR EADSTIPKENSPNSFP NSPNSFPRREREGMPP K E N P R R 0 1 2 0 0 0 1 0 0 0 0 0 0 1 2 2 0 0 0 0 0 0 9 0 1046.4781 A0A075B785;Q9P260 A0A075B785 451 459 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 2 0.0041266 90.37 By MS/MS 1 6740500 6740500 0 1462 20 1651 3820 3758 3758 39 1 ENSPSSQSAGLSSINK EQRNTRNRENSPSSQS AGLSSINKEGEEPTKG R E N N K E 1 0 2 0 0 1 1 1 0 1 1 1 0 0 1 6 0 0 0 0 0 0 16 0 1604.7642 Q9H2Y7;A0A0C4DGM5 Q9H2Y7 1277 1292 ZNF106 Zinc finger protein 106 yes no 2 4.6644E-05 120.84 By MS/MS By MS/MS 1 1 22164000 10470000 11694000 1463 2824 1652 3821;3822 3759;3760;3761 3759 5920 3 ENSSPENKNWLLAMAAK EGSEMVGKENSSPENK WLLAMAAKRKAENPSP K E N A K R 3 0 3 0 0 0 2 0 0 0 2 2 1 0 1 2 0 1 0 0 0 0 17 1 1901.9305 F5GZ90;Q9NZJ0 F5GZ90 611 627 DTL Denticleless protein homolog yes no 3 0.0077315 64.04 By matching By MS/MS 1 1 15497000 5932500 9564300 1464 952 1653 3823;3824 3762 3762 353 1789;1790 1 ENTHNGLRMSIYPK KEYSISNKENTHNGLR LRMSIYPKSTGNKGFE K E N P K S 0 1 2 0 0 0 1 1 1 1 1 1 1 0 1 1 1 0 1 0 0 0 14 1 1658.8199 D6RAC8;Q9NQ76 D6RAC8 82 95 MEPE Matrix extracellular phosphoglycoprotein yes no 2 0.026657 49.189 By matching By MS/MS 1 1 5179000 1752900 3426100 1465 740 1654 3825;3826 3763 3763 1338 1 ENTLFDIHRSPAR VPAHQKKRENTLFDIH DIHRSPARRSHIRRKK R E N A R R 1 2 1 1 0 0 1 0 1 1 1 0 0 1 1 1 1 0 0 0 0 0 13 1 1554.7903 C9JG15;Q9ULI0 C9JG15 323 335 ATAD2B ATPase family AAA domain-containing protein 2B yes no 3 0.011995 58.626 By MS/MS 1 3987700 3987700 0 1466 663 1655 3827 3764 3764 1231 1 ENVEYIEREESDGEYDEFGR YGGGFNERENVEYIER GEYDEFGRKKKKYRGK R E N G R K 0 2 1 2 0 0 7 2 0 1 0 0 0 1 0 1 0 0 2 1 0 0 20 1 2464.0303 O95218 O95218 110 129 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2;3 7.9455E-13 144.4 By MS/MS By MS/MS 2 3 1479900000 672350000 807570000 1467 1582 1656 3828;3829;3830;3831;3832 3765;3766;3767;3768;3769;3770 3769 2995;8210 4 ENVEYIEREESDGEYDEFGRK YGGGFNERENVEYIER EYDEFGRKKKKYRGKA R E N R K K 0 2 1 2 0 0 7 2 0 1 0 1 0 1 0 1 0 0 2 1 0 0 21 2 2592.1252 O95218 O95218 110 130 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 6.1225E-25 153.93 By MS/MS By MS/MS 1 2 286580000 151980000 134610000 1468 1582 1657 3833;3834;3835 3771;3772 3771 2995;8210 2 ENVNLAQIRTFTEMDSHEEK EIVALGYRENVNLAQI EMDSHEEKVFRAVRET R E N E K V 1 1 2 1 0 1 4 0 1 1 1 1 1 1 0 1 2 0 0 1 0 0 20 1 2390.1172 Q6P1Q5;B0YIW6;P48444 Q6P1Q5 123 142 ARCN1 Coatomer subunit delta yes no 3 0.028975 42.78 By MS/MS 1 2725700 2725700 0 1469 516 1658 3836 3773 3773 204 0 ENVQVAQSNLTKDRSMR TTCLVASKENVQVAQS LTKDRSMRKSFDMGGE K E N M R K 1 2 2 1 0 2 1 0 0 0 1 1 1 0 0 2 1 0 0 2 0 0 17 2 1974.9905 A0A0A0MT07;A0A0A0MSC0;F8WEA4;A0A0A0MSD9;A0A0A0MRC8;Q9NR82 A0A0A0MT07 679 695 KCNQ5 Potassium voltage-gated channel subfamily KQT member 5 yes no 2 0.026108 57.52 By MS/MS 1 0 0 0 1470 208 1659 3837 3774 3774 370;371 1 ENVSDLTLGPGNSPITR HVDSSSGRENVSDLTL PGNSPITRMNPASGAL R E N T R M 0 1 2 1 0 0 1 2 0 1 2 0 0 0 2 2 2 0 0 1 0 0 17 0 1768.8955 Q6DCA0 Q6DCA0 62 78 AMMECR1L AMMECR1-like protein yes yes 2;3 1.5009E-42 178.71 By MS/MS By MS/MS 2 2 116550000 59235000 57312000 1471 2301 1660 3838;3839;3840;3841 3775;3776;3777 3777 4634 3 EPAITSQNSPEAR KDLDEKKKEPAITSQN SQNSPEAREESTSSGN K E P A R E 2 1 1 0 0 1 2 0 0 1 0 0 0 0 2 2 1 0 0 0 0 0 13 0 1398.6739 P23193;E5RIS7 P23193 92 104 TCEA1 Transcription elongation factor A protein 1 yes no 2 1.4004E-11 149.82 By MS/MS By MS/MS 1 1 68576000 37499000 31077000 1472 1752 1661 3842;3843 3778;3779;3780;3781 3780 3308 4 EPALPLEPDSGGNTSPGVTANGEAR VELLLTPREPALPLEP VTANGEARTFNGSIEL R E P A R T 3 1 2 1 0 0 3 4 0 0 2 0 0 0 4 2 2 0 0 1 0 0 25 0 2435.1565 V9GYM8;Q92974;Q5VY93 V9GYM8 727 751 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2;3 2.1017E-05 85.469 By MS/MS By MS/MS 3 3 89712000 47767000 41945000 1473 2613 1662;1663 3844;3845;3846;3847;3848;3849 3782;3783;3784;3785 3785 123 5369;5370;7768;7769 4 EPAMRFGTQVSGGDTVTR YTIDQAQKEPAMRFGT SGGDTVTRTLRLNNSS K E P T R T 1 2 0 1 0 1 1 3 0 0 0 0 1 1 1 1 3 0 0 2 0 0 18 1 1907.916 Q9Y238 Q9Y238 1258 1275 DLEC1 Deleted in lung and esophageal cancer protein 1 yes yes 2 0.030181 44.468 By MS/MS 1 0 0 0 1474 3083 1664 3850 3786 3786 1232 1 EPCLHPLEPDEVEYEPR PDVVDLAKEPCLHPLE DEVEYEPRGSRLLVRG K E P P R G 0 1 0 1 1 0 5 0 1 0 2 0 0 0 4 0 0 0 1 1 0 0 17 0 2107.9521 Q9UIQ6 Q9UIQ6 33 49 LNPEP Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form yes yes 3 0.018898 50.376 By MS/MS 1 5219900 0 5219900 1475 3010 1665 3851 3787 3787 8493 1 EPGFEAGPEASDDDLWTR ARKLRGPKEPGFEAGP SDDDLWTRRRSERIFL K E P T R R 2 1 0 3 0 0 3 2 0 0 1 0 0 1 2 1 1 1 0 0 0 0 18 0 1990.8545 H9KVB4;O15417;H7C177 H9KVB4 1979 1996 TNRC18 Trinucleotide repeat-containing gene 18 protein yes no 2 0.0016003 87.419 By MS/MS By MS/MS 1 1 8178400 4763500 3414900 1476 1296 1666 3852;3853 3788;3789;3790 3788 2401 2 EPGPIAPSTNSSPVLK ELVATVAKEPGPIAPS TNSSPVLKTKPQPIPN K E P L K T 1 0 1 0 0 0 1 1 0 1 1 1 0 0 4 3 1 0 0 1 0 0 16 0 1592.841 Q14674 Q14674 1115 1130 ESPL1 Separin yes yes 2 0.0052043 85.473 By MS/MS By MS/MS 1 1 15159000 7631600 7526900 1477 2097 1667 3854;3855 3791;3792 3791 4134;4135;4136;7576 2 EPGQSPIFWYAPESLSDNIFSR DKDYYVVREPGQSPIF LSDNIFSRQSDVWSFG R E P S R Q 1 1 1 1 0 1 2 1 0 2 1 0 0 2 3 4 0 1 1 0 0 0 22 0 2539.202 P52333 P52333 985 1006 JAK3 Tyrosine-protein kinase JAK3 yes yes 3 0.020174 49.973 By matching By MS/MS 1 1 13664000 9565600 4098100 1478 1885 1668 3856;3857 3793 3793 3649;3650 0 EPHSPADQPEQQAESTLTSAETR ASETPLEKEPHSPADQ TLTSAETRGSKKKKKL K E P T R G 3 1 0 1 0 3 4 0 1 0 1 0 0 0 3 3 3 0 0 0 0 0 23 0 2508.1365 Q9H2Y7;A0A0C4DGM5;H3BS99 Q9H2Y7 1325 1347 ZNF106 Zinc finger protein 106 yes no 3 0.0002902 99.414 By MS/MS 1 0 0 0 1479 2824 1669 3858 3794 3794 5921 1 EPILSSEPSPAVTPVTPTTLIAPR VSLDSPEREPILSSEP PTTLIAPRIESKSMSA R E P P R I 2 1 0 0 0 0 2 0 0 2 2 0 0 0 6 3 4 0 0 2 0 0 24 0 2472.3476 O60749;D6RC15 O60749 89 112 SNX2 Sorting nexin-2 yes no 2;3 1.6899E-47 174.24 By MS/MS By MS/MS 2 2 151120000 93596000 57528000 1480 1525 1670 3859;3860;3861;3862 3795;3796;3797;3798;3799 3795 7329;7330;7331 5 EPLIPASPKAEPIWELPTR RSLAPEPKEPLIPASP PIWELPTRAPRLSIGD K E P T R A 2 1 0 0 0 0 3 0 0 2 2 1 0 0 5 1 1 1 0 0 0 0 19 1 2143.1677 Q9Y613 Q9Y613 517 535 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 3 0.00064608 78.848 By MS/MS 1 6472900 6472900 0 1481 3141 1671 3863 3800;3801 3800 6721 2 EPLLSSSENGNGGR VSERKNTREPLLSSSE SENGNGGRETSPADAR R E P G R E 0 1 2 0 0 0 2 3 0 0 2 0 0 0 1 3 0 0 0 0 0 0 14 0 1415.6641 M0R2C7;M0QYC1;M0QZR4;Q92888 M0R2C7 208 221 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes no 2 0.004126 81.619 By MS/MS By MS/MS 1 1 7951000 3756400 4194700 1482 1406 1672 3864;3865 3802;3803 3802 56 2579 2 EPLSSETQYSVDTR HNIDHAQREPLSSETQ TQYSVDTRRPAPQKAL R E P T R R 0 1 0 1 0 1 2 0 0 0 1 0 0 0 1 3 2 0 1 1 0 0 14 0 1610.7424 A6PW57;Q99755;A2A3N6 A6PW57 326 339 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 2 1.0484E-25 164.48 By MS/MS By MS/MS 1 1 90620000 45548000 45072000 1483 489 1673 3866;3867 3804;3805 3805 8055 2 EPMDLATMEERVQR PDYYGVIKEPMDLATM TMEERVQRRYYEKLTE K E P Q R R 1 2 0 1 0 1 3 0 0 0 1 0 2 0 1 0 1 0 0 1 0 0 14 1 1703.7971 E7ETD6;Q12830;J3QQQ8;E9PE19 E7ETD6 2688 2701 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 0.029214 40.066 By MS/MS 1 0 0 0 1484 819 1674 3868 3806 3806 306;307 1 EPPLYYGVCPVYEDVPAR RAGATASKEPPLYYGV VYEDVPARNERIYVYE K E P A R N 1 1 0 1 1 0 2 1 0 0 1 0 0 0 4 0 0 0 3 3 0 0 18 0 2123.0034 Q86XL3 Q86XL3 195 212 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2;3 6.7739E-10 139.78 By MS/MS By MS/MS 2 2 40965000 22068000 18896000 1485 2418 1675 3869;3870;3871;3872 3807;3808;3809;3810;3811 3808 8389 5 EPPSPSETGPNSLGTFK SADDLDEREPPSPSET PNSLGTFKKTLMSKAA R E P F K K 0 0 1 0 0 0 2 2 0 0 1 1 0 1 4 3 2 0 0 0 0 0 17 0 1743.8315 F8VWZ8;Q52LW3 F8VWZ8 586 602 ARHGAP29 Rho GTPase-activating protein 29 yes no 2 0.012267 66.708 By MS/MS By MS/MS 1 2 18617000 5456100 13161000 1486 1023 1676 3873;3874;3875 3812;3813 3812 1915 2 EPQQPPSPGGLPVSEAPSLPAAQPAAK ESLAAEPREPQQPPSP PAAQPAAKDSPSSTAF R E P A K D 5 0 0 0 0 3 2 2 0 0 2 1 0 0 8 3 0 0 0 1 0 0 27 0 2620.3497 Q9NZ56 Q9NZ56 289 315 FMN2 Formin-2 yes yes 3 0.0049534 50.96 By MS/MS 1 9384100 9384100 0 1487 2954 1677 3876 3814;3815 3815 6227 2 EPSEVPTPK TALVGSQKEPSEVPTP PSEVPTPKRPRGRPKG K E P P K R 0 0 0 0 0 0 2 0 0 0 0 1 0 0 3 1 1 0 0 1 0 0 9 0 982.49713 P17096 P17096 47 55 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2 0.00066556 89.561 By MS/MS 1 2181800 0 2181800 1488 1712 1678 3877 3816 3816 7399 0 EPTPSIASDISLPIATQELR SPGHISVKEPTPSIAS PIATQELRQRLRQLEN K E P L R Q 2 1 0 1 0 1 2 0 0 3 2 0 0 0 3 3 2 0 0 0 0 0 20 0 2137.1267 H7BXI1;A0A087WXU3;A0FGR8 H7BXI1 714 733 ESYT2 Extended synaptotagmin-2 yes no 2;3 9.8718E-11 139.11 By MS/MS By MS/MS 3 3 79429000 46842000 32587000 1489 113 1679;1680 3878;3879;3880;3881;3882;3883 3817;3818;3819;3820;3821;3822 3818 196;197;198;6857 6 EPVADEEEEDSDDDVEPITEFR AKFEEESKEPVADEEE VEPITEFRFVPSDKSA K E P F R F 1 1 0 5 0 0 7 0 0 1 0 0 0 1 2 1 1 0 0 2 0 0 22 0 2564.0562 E9PJF4;P54105 E9PJF4 92 113 CLNS1A Methylosome subunit pICln yes no 2;3 5.4763E-48 181.34 By MS/MS By MS/MS 2 2 79226000 36369000 42857000 1490 890 1681 3884;3885;3886;3887 3823;3824;3825;3826 3826 1667 4 EPVAESPK EPLPGLTREPVAESPK EPVAESPKKKRWEAAS R E P P K K 1 0 0 0 0 0 2 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 8 0 855.4338 A0A0G2JNN3;A0A087WTE7;C9JMY0;A0A087WUE4;Q96PV6 A0A0G2JNN3 198 205 LENG8 Leukocyte receptor cluster member 8 yes no 2 0.020486 72.848 By matching By MS/MS 1 1 5121100 2789400 2331700 1491 30 1682 3888;3889 3827 3827 60 1 EPVQALPSSASR SQTHVPNREPVQALPS ALPSSASRKRLDKKRS R E P S R K 2 1 0 0 0 1 1 0 0 0 1 0 0 0 2 3 0 0 0 1 0 0 12 0 1240.6412 Q9HB65 Q9HB65 199 210 ELL3 RNA polymerase II elongation factor ELL3 yes yes 3 0.018587 58.824 By MS/MS 1 0 0 0 1492 2864 1683 3890 3828 3828 6032;6033 1 EQAIVSMSTTTWPESTR PVVTTSTREQAIVSMS TTWPESTRARTEPNSF R E Q T R A 1 1 0 0 0 1 2 0 0 1 0 0 1 0 1 3 4 1 0 1 0 0 17 0 1922.9044 Q8WXI7 Q8WXI7 3988 4004 MUC16 Mucin-16 yes yes 2 0.031375 42.031 By MS/MS 1 0 0 0 1493 2571 1684 3891 3829 3829 1 EQDLPLAEAVRPKTPPVVIK KEEKSNGREQDLPLAE KTPPVVIKSQLKTQED R E Q I K S 2 1 0 1 0 1 2 0 0 1 2 2 0 0 4 0 1 0 0 3 0 0 20 2 2199.2627 Q96A49 Q96A49 235 254 SYAP1 Synapse-associated protein 1 yes yes 3;4 0.00017872 107.98 By MS/MS By MS/MS 2 2 388060000 217060000 171000000 1494 2617 1685 3892;3893;3894;3895 3830;3831;3832;3833;3834;3835;3836;3837 3831 7773 8 EQEPIGTDLDAVRTPEPLEEFPK LAAATTSKEQEPIGTD EPLEEFPKREDQEGSP K E Q P K R 1 1 0 2 0 1 5 1 0 1 2 1 0 1 4 0 2 0 0 1 0 0 23 1 2609.2861 P10244 P10244 253 275 MYBL2 Myb-related protein B yes yes 3 8.9249E-05 86.575 By MS/MS By MS/MS 1 1 27483000 15642000 11841000 1495 1672 1686 3896;3897 3838;3839 3838 7383 2 EQFEGLGSTPDAK GSGTSLEREQFEGLGS LGSTPDAKLDKTCISR R E Q A K L 1 0 0 1 0 1 2 2 0 0 1 1 0 1 1 1 1 0 0 0 0 0 13 0 1377.6412 Q8NCN4 Q8NCN4 546 558 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 2 0.0014014 91.701 By MS/MS By MS/MS 1 1 8626500 6045400 2581100 1496 2503 1687 3898;3899 3840;3841 3841 5111;7731 2 EQFLDGDGWTSR AEPAVYFKEQFLDGDG DGDGWTSRWIESKHKS K E Q S R W 0 1 0 2 0 1 1 2 0 0 1 0 0 1 0 1 1 1 0 0 0 0 12 0 1409.6212 K7EJB9;P27797 K7EJB9 25 36 CALR Calreticulin yes no 2 0.0013955 107.55 By MS/MS By MS/MS 1 1 23280000 10581000 12698000 1497 1369 1688 3900;3901 3842;3843 3842 2 EQFSTQDQLTFYEGDLKK E Q K K 0 0 0 2 0 3 2 1 0 0 2 2 0 2 0 1 2 0 1 0 0 0 18 1 2176.0324 REV__A0A087WXZ1 yes yes 3 0.023725 48.131 By MS/MS 1 2803200 0 2803200 + 1498 3162 1689 3902 3844 3844 6761 1 EQGVLSFWR DCIVRIPKEQGVLSFW QGVLSFWRGNLANVIR K E Q W R G 0 1 0 0 0 1 1 1 0 0 1 0 0 1 0 1 0 1 0 1 0 0 9 0 1120.5665 P12236;P05141 P12236 64 72 SLC25A6;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 2 0.0099927 95.815 By MS/MS By MS/MS 1 1 11532000 6371900 5159700 1499 1639 1690 3903;3904 3845;3846 3845 2 EQGVRSMNSTDIQWSAILSWGYADNILR CLLMTYSKEQGVRSMN GYADNILRLKSKQSEP K E Q L R L 2 2 2 2 0 2 1 2 0 3 2 0 1 0 0 4 1 2 1 1 0 0 28 1 3209.5564 Q99698 Q99698 3520 3547 LYST Lysosomal-trafficking regulator yes yes 3 0.013472 46.504 By MS/MS By matching 1 1 80936000 34887000 46049000 1500 2732 1691 3905;3906 3847 3847 1085 5671 1 EQISDIDDAVR PEQWSQLKEQISDIDD SDIDDAVRKL______ K E Q V R K 1 1 0 3 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1259.5994 P53999 P53999 115 125 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 2 0.0010832 112.36 By MS/MS By MS/MS 1 1 27289000 13443000 13846000 1501 1900 1692 3907;3908 3848;3849 3848 2 EQKSPDSTWTPVPDERVPK SVFTGRFKEQKSPDST VPDERVPKPRPGCCAG K E Q P K P 0 1 0 2 0 1 2 0 0 0 0 2 0 0 4 2 2 1 0 2 0 0 19 2 2195.0859 A0A0A0MQU6;Q9H2E6 A0A0A0MQU6 345 363 SEMA6A Semaphorin-6A yes no 2 0.017209 49.929 By MS/MS 1 3182400 3182400 0 1502 192 1693 3909 3850 3850 343 1 EQLAIAEFAR YATSMGSREQLAIAEF LAIAEFARSLLVIPNT R E Q A R S 3 1 0 0 0 1 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 10 0 1146.6033 F5H282;E7EQR6;P17987 F5H282 210 219 TCP1 T-complex protein 1 subunit alpha yes no 2 0.01158 101.46 By MS/MS 1 0 0 0 1503 809 1694 3910 3851 3851 1 EQLVDQGIMPPLKSPAAFHEQIK RLQQRRTREQLVDQGI AAFHEQIKSLERARTE R E Q I K S 2 0 0 1 0 3 2 1 1 2 2 2 1 1 3 1 0 0 0 1 0 0 23 1 2575.3468 Q9ULH7;I3L2S3 Q9ULH7 53 75 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator yes no 3 0.00047735 73.688 By MS/MS By MS/MS 1 1 15880000 9516200 6364100 1504 3042 1695 3911;3912 3852;3853;3854 3853 6406 3 EQMDNAVYTFETLLHQELGK QRAQIHMREQMDNAVY LLHQELGKGPTKEELC R E Q G K G 1 0 1 1 0 2 3 1 1 0 3 1 1 1 0 0 2 0 1 1 0 0 20 0 2365.126 Q96TA1 Q96TA1 439 458 FAM129B Niban-like protein 1 yes yes 2 0.030872 42.797 By MS/MS 1 0 0 0 1505 2717 1696 3913 3855 3855 1 EQMMNSSISSGSGSLR EAKIHDLREQMMNSSI SSGSGSLRTSQKRSLY R E Q L R T 0 1 1 0 0 1 1 2 0 1 1 0 2 0 0 6 0 0 0 0 0 0 16 0 1669.74 E7EQD7;A0A0C4DFT3;Q12959 E7EQD7 562 577 DLG1 Disks large homolog 1 yes no 2 0.019644 63.374 By MS/MS 1 2173300 0 2173300 1506 296 1697 3914 3856 3856 522;523;524 1 EQMMNSSISSGSGSLRTSQKR EAKIHDLREQMMNSSI SLRTSQKRSLYVRALF R E Q K R S 0 2 1 0 0 2 1 2 0 1 1 1 2 0 0 7 1 0 0 0 0 0 21 2 2270.0743 E7EQD7;A0A0C4DFT3;Q12959 E7EQD7 562 582 DLG1 Disks large homolog 1 yes no 2 0.0052195 73.76 By matching By MS/MS 1 1 29243000 13833000 15410000 1507 296 1698 3915;3916 3857 3857 522;523;524 1 EQNSALPTSSQDEELMEVVEK AGSSPETKEQNSALPT ELMEVVEKSEEPAGQI K E Q E K S 1 0 1 1 0 2 5 0 0 0 2 1 1 0 1 3 1 0 0 2 0 0 21 0 2362.0846 Q9UQ35 Q9UQ35 1224 1244 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.0018859 64.675 By MS/MS By MS/MS 2 1 19023000 12402000 6620400 1508 3074 1699 3917;3918;3919 3858;3859;3860;3861 3858 1222 6519;6520;7922 3 EQNYDLTEVSESMK ESVSKEEKEQNYDLTE TEVSESMKAFISKVST K E Q M K A 0 0 1 1 0 1 3 0 0 0 1 1 1 0 0 2 1 0 1 1 0 0 14 0 1671.7298 O95905 O95905 445 458 ECD Protein SGT1 yes yes 2 0.00023733 98.105 By MS/MS By MS/MS 1 1 14240000 5541300 8698500 1509 1612 1700 3920;3921 3862;3863 3863 578 8213 2 EQPWYQAKCLSK E Q S K 1 0 0 0 1 2 1 0 0 0 1 2 0 0 1 1 0 1 1 0 0 0 12 1 1536.7395 REV__B4DSN5 yes no 2 0.0016541 98.048 By MS/MS By MS/MS 1 1 21150000 13867000 7282100 + 1510 3171 1701 3922;3923 3864;3865 3865 6767 2 EQQMQEVMENCIER E Q E R 0 1 1 0 1 3 4 0 0 1 0 0 2 0 0 0 0 0 0 1 0 0 14 0 1822.7648 REV__O95235 yes no 2 0.032356 72.848 By MS/MS 1 3879400 3879400 0 + 1511 3200 1702 3924 3866 3866 0 EQSAEEDAEAEVDNSK TIVETEIKEQSAEEDA EAEVDNSKQLIPTLQR K E Q S K Q 3 0 1 2 0 1 5 0 0 0 0 1 0 0 0 2 0 0 0 1 0 0 16 0 1749.7177 Q8NEZ4;C9J4Z5;H0YMU7 Q8NEZ4 87 102 KMT2C Histone-lysine N-methyltransferase 2C yes no 2 4.6644E-05 120.84 By MS/MS By matching 1 1 7027000 5773300 1253700 1512 2515 1703 3925;3926 3867 3867 5135 1 EQSELDQDLDDVEEVEEEETGEETK ________________ EETGEETKLKARQLTV K E Q T K L 0 0 0 4 0 2 10 1 0 0 2 1 0 0 0 1 2 0 0 2 0 0 25 0 2923.2102 F8W020;F8VXI6;F8VUX1;F8VY35;F8W0J6;F5H4R6;H0YIV4;P55209;F8VVB5 F8W020 8 32 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 3 3.0834E-07 97.23 By MS/MS By matching 1 1 16738000 4755500 11982000 1513 972 1704 3927;3928 3868 3868 1827 1 EQSEVSVSPR SPDRDKKKEQSEVSVS SEVSVSPRASKHHYSR K E Q P R A 0 1 0 0 0 1 2 0 0 0 0 0 0 0 1 3 0 0 0 2 0 0 10 0 1116.5411 E9PI52;Q7L4I2 E9PI52 25 34 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 2 0.0015286 109.16 By MS/MS By MS/MS 1 1 239600000 129550000 110050000 1514 881 1705 3929;3930 3869;3870;3871;3872 3870 1638 4 EQSSDLTPSGDVSPVKPLSR KMKDNEEREQSSDLTP SPVKPLSRSAELEFPL R E Q S R S 0 1 0 2 0 1 1 1 0 0 2 1 0 0 3 5 1 0 0 2 0 0 20 1 2098.0542 Q8WYQ5 Q8WYQ5 365 384 DGCR8 Microprocessor complex subunit DGCR8 yes yes 2;3 2.8992E-06 126.8 By MS/MS By MS/MS 3 2 243460000 139440000 104020000 1515 2576 1706;1707 3931;3932;3933;3934;3935 3873;3874;3875;3876;3877;3878 3877 5285;5286 6 EQTGSICQYLVMRAK PEDIRWMKEQTGSICQ QYLVMRAKRKLGRHLP K E Q A K R 1 1 0 0 1 2 1 1 0 1 1 1 1 0 0 1 1 0 1 1 0 0 15 1 1782.8757 Q96AD5 Q96AD5 368 382 PNPLA2 Patatin-like phospholipase domain-containing protein 2 yes yes 3 0.029271 47.64 By matching By MS/MS 1 1 6958500 3536300 3422200 1516 2619 1708 3936;3937 3879 3879 1051 1 EQTLQGAEEDEDLEGPPSYKPPTPK LICRQQRKEQTLQGAE SYKPPTPKAKLEAQEM K E Q P K A 1 0 0 2 0 2 5 2 0 0 2 2 0 0 5 1 2 0 1 0 0 0 25 1 2754.2872 Q92692 Q92692 388 412 PVRL2 Nectin-2 yes yes 3 3.8941E-05 79.143 By MS/MS 1 11173000 11173000 0 1517 2595 1709 3938 3880 3880 7762 1 EQTLSPTITSGLHNIAR EFLYDKLREQTLSPTI SGLHNIARSIETRNYS R E Q A R S 1 1 1 0 0 1 1 1 1 2 2 0 0 0 1 2 3 0 0 0 0 0 17 0 1836.9694 D6REX3;O94979;H7BXG7;H0Y8W8 D6REX3 1190 1206 SEC31A Protein transport protein Sec31A yes no 2;3 1.4061E-15 147.49 By MS/MS By MS/MS 1 2 47298000 14939000 32359000 1518 761 1710 3939;3940;3941 3881;3882;3883 3882 1372 3 EQVANSAFVER YYITGESKEQVANSAF ANSAFVERVRKRGFEV K E Q E R V 2 1 1 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1248.6099 P08238;Q58FF7 P08238 492 502 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 3.8499E-07 152.54 By MS/MS By MS/MS 1 1 29229000 15366000 13863000 1519 1658 1711 3942;3943 3884;3885 3884 2 EQYGLGPYEAVTPLTK LEQGNRLREQYGLGPY EAVTPLTKAADISLDN R E Q T K A 1 0 0 0 0 1 2 2 0 0 2 1 0 0 2 0 2 0 2 1 0 0 16 0 1764.8934 Q12888;A6NNK5;H7BZY0 Q12888 1598 1613 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 2.9465E-06 126.42 By MS/MS By MS/MS 1 1 15711000 7937500 7773700 1520 2031 1712 3944;3945 3886;3887 3887 7535;7536 1 EQYVPPRSPK GVTRRNGKEQYVPPRS YVPPRSPK________ K E Q P K - 0 1 0 0 0 1 1 0 0 0 0 1 0 0 3 1 0 0 1 1 0 0 10 1 1199.6299 Q71RC2;X6RLN4 Q71RC2 715 724 LARP4 La-related protein 4 yes no 2;3 0.00091045 129 By MS/MS By MS/MS 2 2 88311000 43953000 44358000 1521 2359 1713 3946;3947;3948;3949 3888;3889;3890;3891 3888 4783 4 ERALEDAQAVNEQLSSER LQGLVRQKERALEDAQ NEQLSSERSNLAQVIR K E R E R S 3 2 1 1 0 2 4 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 18 1 2043.9821 Q9UPN4;I3L2J8;I3L2X7;I3L316;I3L4M5 Q9UPN4 976 993 CEP131 Centrosomal protein of 131 kDa yes no 2 0.031787 60.307 By MS/MS 1 6403000 6403000 0 1522 3064 1714 3950 3892 3892 0 ERDHSPTPSVFNSDEER ERTRERERERDHSPTP VFNSDEERYRYREYAE R E R E R Y 0 2 1 2 0 0 3 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 17 1 2000.8824 Q6UN15 Q6UN15 488 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 3 0.0016374 78.531 By MS/MS By MS/MS 2 2 130640000 66374000 64268000 1523 2338 1715;1716 3951;3952;3953;3954 3893;3894;3895;3896 3894 4723;4724;7671 4 ERDKEVSDDEAEEK PITLFVEKERDKEVSD SDDEAEEKEDKEEEKE K E R E K E 1 1 0 3 0 0 5 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 14 2 1677.733 P07900;G3V2J8 P07900 225 238 HSP90AA1 Heat shock protein HSP 90-alpha yes no 3 0.0008012 96.805 By MS/MS By matching 1 1 9338800 6179000 3159800 1524 1656 1717 3955;3956 3897 3897 3122 1 ERDTSPDKGELVSDEEEDT AIREDFLRERDTSPDK VSDEEEDT________ R E R D T - 0 1 0 4 0 0 5 1 0 0 1 1 0 0 1 2 2 0 0 1 0 0 19 2 2149.9135 Q9UPU7 Q9UPU7 945 963 TBC1D2B TBC1 domain family member 2B yes yes 3 0.013917 62.203 By matching By MS/MS 1 1 21793000 11070000 10723000 1525 3070 1718 3957;3958 3898 3898 6497 1 ERDYAEIQDFHR EFRERQARERDYAEIQ AEIQDFHRTFGCDDEL R E R H R T 1 2 0 2 0 1 2 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 12 1 1577.7223 Q5VWV2;Q8TEW0 Q5VWV2 1017 1028 PARD3 Partitioning defective 3 homolog yes no 3 2.1374E-11 151.13 By MS/MS By MS/MS 1 1 20457000 10497000 9960000 1526 2278 1719 3959;3960 3899;3900 3899 8369 2 ERECSPSSPLPPLPEDEEGSEVTNSK MRNSPSVRERECSPSS GSEVTNSKSRDVYKLP R E R S K S 0 1 1 1 1 0 6 1 0 0 2 1 0 0 5 5 1 0 0 1 0 0 26 1 2869.2924 Q96GY3 Q96GY3 131 156 LIN37 Protein lin-37 homolog yes yes 3 5.2061E-06 85.11 By MS/MS 1 10421000 10421000 0 1527 2659 1720 3961 3901 3901 5481 1 EREDSGDAEAHAFK EDGGCWQREREDSGDA DAEAHAFKSPSKENKK R E R F K S 3 1 0 2 0 0 3 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 14 1 1560.6805 Q9NPI1 Q9NPI1 275 288 BRD7 Bromodomain-containing protein 7 yes yes 3 0.0035425 72.207 By matching By MS/MS 1 1 8736900 4859700 3877200 1528 2889 1721 3962;3963 3902;3903 3903 6080 2 EREESEDELEEANGNNPIDIEVDQNK RHARKQKREREESEDE DIEVDQNKESKKEVPP R E R N K E 1 1 4 3 0 1 8 1 0 2 1 1 0 0 1 1 0 0 0 1 0 0 26 1 3014.3225 Q9UKL0 Q9UKL0 256 281 RCOR1 REST corepressor 1 yes yes 3 1.8745E-07 120.33 By MS/MS By MS/MS 3 2 243280000 142160000 101120000 1529 3026 1722;1723;1724 3964;3965;3966;3967;3968 3904;3905;3906;3907;3908 3908 142;143;144 6380 5 EREVDEDSEPER VPFVRVKREREVDEDS DEDSEPEREVRAKNGR R E R E R E 0 2 0 2 0 0 5 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 12 1 1488.6328 F8WC91;B9A018;Q53GS9 F8WC91 75 86 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 3 0.0058324 67.299 By MS/MS By MS/MS 1 2 9499700 4316600 5183200 1530 609 1725 3969;3970;3971 3909;3910 3910 1097 2 ERGLISPSDFAQLQKYMEYSTK ________________ KYMEYSTKKVSDVLKL K E R T K K 1 1 0 1 0 2 2 1 0 1 2 2 1 1 1 3 1 0 2 0 0 0 22 2 2590.2737 G3V4I3;F8VNZ9;G3V327;C9JM35;F8W1M3;F8W1H7;G3V4E1;P23743 G3V4I3 4 25 DGKA Diacylglycerol kinase;Diacylglycerol kinase alpha yes no 3 0.022426 40.381 By MS/MS By matching 1 1 44292000 17548000 26745000 1531 675 1726 3972;3973 3911 3911 1245;1246 1 ERLDGENIYIR IRMRKKKRERLDGENI DGENIYIRHSNLMLED R E R I R H 0 2 1 1 0 0 2 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 11 1 1376.7048 P11171;Q4VB86 P11171 652 662 EPB41 Protein 4.1 yes no 2;3 1.9162E-64 213.8 By MS/MS By MS/MS 2 2 475690000 235530000 240160000 1532 1681 1727 3974;3975;3976;3977 3912;3913;3914;3915;3916 3915 8226 5 ERPESPMVPSEQVVEEAVPLPPQALTTSQDGHR QPQAPLNRERPESPMV TTSQDGHRRKGDSEAE R E R H R R 2 2 0 1 0 3 5 1 1 0 2 0 1 0 6 3 2 0 0 4 0 0 33 1 3609.7733 A0A0A0MT60;Q5T1M5 A0A0A0MT60 1000 1032 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 4 2.5468E-09 83.179 By MS/MS 1 10675000 10675000 0 1533 266 1728 3978 3917;3918 3918 110 465 2 ERPISLGIFPLPAGDGLLTPDAQK TAHSRIRKERPISLGI LLTPDAQKGGETPGSE K E R Q K G 2 1 0 2 0 1 1 3 0 2 4 1 0 1 4 1 1 0 0 0 0 0 24 1 2504.3639 O60271;A0A087X2D8;D6RHI8 O60271 199 222 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 3 1.1414E-36 164.19 By MS/MS By MS/MS 2 2 168730000 95061000 73672000 1534 1514 1729;1730 3979;3980;3981;3982 3919;3920;3921 3920 2850;7327 3 ERPLQQVSPVASVPWR KEDAPQEKERPLQQVS PVASVPWRSHSFCKDR K E R W R S 1 2 0 0 0 2 1 0 0 0 1 0 0 0 3 2 0 1 0 3 0 0 16 1 1848.0006 Q9BY89 Q9BY89 1481 1496 KIAA1671 Uncharacterized protein KIAA1671 yes yes 3 0.00050193 90.017 By MS/MS By MS/MS 1 1 20225000 8686100 11539000 1535 2777 1731 3983;3984 3922;3923;3924;3925 3923 5778 4 ERPSSAIYPSDSFR LRSKTTIRERPSSAIY IYPSDSFRQSLLGSRR R E R F R Q 1 2 0 1 0 0 1 0 0 1 0 0 0 1 2 4 0 0 1 0 0 0 14 1 1610.7689 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 163 176 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.0058107 78.166 By MS/MS By MS/MS 1 1 33096000 18394000 14701000 1536 2613 1732 3985;3986 3926;3927 3926 5371;8414 2 ERPTPSLNNNCTTSEDSLVLYNR NETSAPFKERPTPSLN DSLVLYNRVAVQGDVV K E R N R V 0 2 4 1 1 0 2 0 0 0 3 0 0 0 2 3 3 0 1 1 0 0 23 1 2679.2559 V9GYZ6;P07814 V9GYZ6 741 763 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 3 2.4912E-05 93.179 By MS/MS By MS/MS 1 1 40900000 21199000 19701000 1537 1655 1733 3987;3988 3928;3929;3930 3928 3116;7378 3 ERSDSGGSSSEPFDR HPSGLVPRERSDSGGS SSSEPFDRHAPAMLRE R E R D R H 0 2 0 2 0 0 2 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 15 1 1611.6761 P48634 P48634 757 771 PRRC2A Protein PRRC2A yes yes 2 1.2752E-05 125.39 By MS/MS By matching 1 1 29199000 14084000 15115000 1538 1846 1734 3989;3990 3931 3931 3540 1 ERSESLDPDSSMDTTLILK LTSASRIRERSESLDP MDTTLILKDTEAVMAF R E R L K D 0 1 0 3 0 0 2 0 0 1 3 1 1 0 1 4 2 0 0 0 0 0 19 1 2136.0256 H0Y2V6;Q5SW79 H0Y2V6 841 859 CEP170 Centrosomal protein of 170 kDa yes no 3 0.00017589 104.23 By MS/MS 1 12783000 0 12783000 1539 1112 1735 3991 3932;3933 3932 401 2091 2 ERSMSENAVR RAVGRLKRERSMSENA SMSENAVRQNGQLVRN R E R V R Q 1 2 1 0 0 0 2 0 0 0 0 0 1 0 0 2 0 0 0 1 0 0 10 1 1177.551 H7C433;A0A0A0MS29;C9JHF5;Q9GZY8 H7C433 10 19 MFF Mitochondrial fission factor yes no 2 0.0043862 100.04 By matching By MS/MS 1 1 10880000 1187800 9692700 1540 238 1736 3992;3993 3934 3934 100 416 1 ERSPALK AVSELSPRERSPALKS RERSPALKSPLQSVVV R E R L K S 1 1 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 7 1 799.4552 Q9Y2W1 Q9Y2W1 246 252 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.025645 112.11 By MS/MS By MS/MS 1 1 82383000 53736000 28647000 1541 3096 1737 3994;3995 3935;3936 3935 6646 2 ERSPALKSPLQSVVVR AVSELSPRERSPALKS PLQSVVVRRRSPRPSP R E R V R R 1 2 0 0 0 1 1 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 16 2 1765.021 Q9Y2W1 Q9Y2W1 246 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3;4 0.0017305 100.77 By MS/MS By MS/MS 4 3 911930000 450970000 460960000 1542 3096 1738;1739 3996;3997;3998;3999;4000;4001;4002 3937;3938;3939;3940;3941;3942;3943;3944 3942 6646;6647 8 ERSPSPLRGNVVPSPLPTR LLDTPRSRERSPSPLR VPSPLPTRRTRTFSAT R E R T R R 0 3 1 0 0 0 1 1 0 0 2 0 0 0 5 3 1 0 0 2 0 0 19 2 2058.1334 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 28 46 CARHSP1 Calcium-regulated heat stable protein 1 yes no 3 0.0065649 64.298 By MS/MS By MS/MS 2 2 230110000 122450000 107660000 1543 1236 1740;1741 4003;4004;4005;4006 3945;3946;3947 3945 2308;2309;2310 3 ERSPSPPTIQSK RKRRRMLRERSPSPPT SPPTIQSKRQTPSPRL R E R S K R 0 1 0 0 0 1 1 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 12 1 1325.6939 H7C3B5;H0Y613;Q14687 H7C3B5 26 37 GSE1 Genetic suppressor element 1 yes no 2 0.015394 92.151 By MS/MS 1 8714100 8714100 0 1544 1132 1742 4007 3948 3948 2154;2155 1 ERTPESEEENVEWETNR KEDIKITKERTPESEE NVEWETNRDDSDNGDI K E R N R D 0 2 2 0 0 0 7 0 0 0 0 0 0 0 1 1 2 1 0 1 0 0 17 1 2132.9247 Q5T200 Q5T200 132 148 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 0.030971 69.069 By matching By MS/MS 1 1 13866000 6169800 7696500 1545 2238 1743 4008;4009 3949 3949 1 ERTSSLTQFPPSQSEER NYCPPVKRERTSSLTQ PPSQSEERSSGFRLKP R E R E R S 0 2 0 0 0 2 3 0 0 0 1 0 0 1 2 4 2 0 0 0 0 0 17 1 1977.9392 B7Z7F3;Q9H6Z4 B7Z7F3 54 70 RANBP3 Ran-binding protein 3 yes no 3 0.00167 77.66 By MS/MS By MS/MS 1 2 22242000 10056000 12186000 1546 591 1744 4010;4011;4012 3950;3951 3950 1076;7000 2 ERTSTDVMDSQEALAFLKCR LCSNLYHRERTSTDVM ALAFLKCRTQTPTNIN R E R C R T 2 2 0 2 1 1 2 0 0 0 2 1 1 1 0 2 2 0 0 1 0 0 20 2 2356.1151 B4E128;Q08AF3 B4E128 121 140 SLFN5 Schlafen family member 5 yes no 3 0.032317 46.621 By MS/MS 1 0 0 0 1547 572 1745 4013 3952 3952 229 1 ERTVLSGSIMQGTPR GSPHSDLKERTVLSGS SIMQGTPRATTESFED K E R P R A 0 2 0 0 0 1 1 2 0 1 1 0 1 0 1 2 2 0 0 1 0 0 15 1 1630.8461 A0A088AWL3;O75376 A0A088AWL3 1195 1209 NCOR1 Nuclear receptor corepressor 1 yes no 2 0.022286 62.69 By MS/MS 1 0 0 0 1548 177 1746 4014 3953 3953 290;291 1 ERVPDSPSPAPSLEEGR RVETSVIKERVPDSPS APSLEEGRRPGSHPSS K E R G R R 1 2 0 1 0 0 3 1 0 0 1 0 0 0 4 3 0 0 0 1 0 0 17 1 1821.8857 A0A087WZP2;Q9UI36 A0A087WZP2 486 502 DACH1 Dachshund homolog 1 yes no 2;3 0.0013548 76.678 By MS/MS By MS/MS 3 3 61910000 26219000 35691000 1549 143 1747;1748 4015;4016;4017;4018;4019;4020 3954;3955;3956;3957 3957 231;232;233 2 ERVTPPEGYEVVTVFPK IYCEKHARERVTPPEG EVVTVFPK________ R E R P K - 0 1 0 0 0 0 3 1 0 0 0 1 0 1 3 0 2 0 1 4 0 0 17 1 1946.0149 O00151 O00151 313 329 PDLIM1 PDZ and LIM domain protein 1 yes yes 2;3 1.7239E-10 141.13 By MS/MS By MS/MS 2 2 36370000 17206000 19163000 1550 1426 1749 4021;4022;4023;4024 3958;3959;3960;3961 3961 8174 4 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR TGDSASERESAAPAAA ALPSPAIRAPLPDLYP R E S I R A 9 2 0 0 0 1 3 0 0 1 1 0 0 0 9 3 2 0 0 2 0 0 33 1 3245.7044 Q92841 Q92841 36 68 DDX17 Probable ATP-dependent RNA helicase DDX17 yes yes 3;4 1.5787E-06 73.212 By MS/MS By MS/MS 2 2 582350000 300960000 281390000 1551 2604 1750 4025;4026;4027;4028 3962;3963;3964;3965;3966;3967;3968;3969 3968 5354;7765 7 ESAAPASPAPSPAPSPTPAPPQK KRRASNEKESAAPASP PTPAPPQKEQPPAETP K E S Q K E 6 0 0 0 0 1 1 0 0 0 0 1 0 0 9 4 1 0 0 0 0 0 23 0 2152.08 Q3KQU3;H0YF21 Q3KQU3 538 560 MAP7D1 MAP7 domain-containing protein 1 yes no 2;3 0.00018585 94.958 By MS/MS By MS/MS 3 4 125350000 51743000 73605000 1552 2187 1751;1752;1753 4029;4030;4031;4032;4033;4034;4035 3970;3971;3972;3973;3974;3975;3976;3977 3973 4350;4351;4352 8 ESASPTIPNLDLLEAHTK KKKGKKSRESASPTIP DLLEAHTKEALTKMEP R E S T K E 2 0 1 1 0 0 2 0 1 1 3 1 0 0 2 2 2 0 0 0 0 0 18 0 1934.9949 O75151 O75151 536 553 PHF2 Lysine-specific demethylase PHF2 yes yes 3 0.0010581 73.918 By MS/MS By MS/MS 1 1 33048000 18644000 14404000 1553 1537 1754 4036;4037 3978;3979 3978 2903;2904 2 ESAWSPPPIEIR QASKNTEKESAWSPPP SPPPIEIRLISPLASP K E S I R L 1 1 0 0 0 0 2 0 0 2 0 0 0 0 3 2 0 1 0 0 0 0 12 0 1380.7038 Q8WYP5 Q8WYP5 2208 2219 AHCTF1 Protein ELYS yes yes 2 0.0048963 90.689 By matching By MS/MS 1 1 12992000 7317200 5674900 1554 2575 1755 4038;4039 3980 3980 5276 0 ESDQTLAALLSPK TEEPLPVKESDQTLAA LAALLSPKESSGGEKE K E S P K E 2 0 0 1 0 1 1 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 13 0 1371.7246 P18583;H7C1M2 P18583 1687 1699 SON Protein SON yes no 2 1.1812E-160 256.13 By MS/MS By MS/MS 2 1 176020000 99779000 76236000 1555 1725 1756 4040;4041;4042 3981;3982;3983;3984;3985;3986;3987;3988 3982 3239;7403 8 ESDTKNEVNGTSEDIKSEGDTQSN EDTNTESKESDTKNEV SEGDTQSN________ K E S S N - 0 0 3 3 0 1 4 2 0 1 0 2 0 0 0 4 3 0 0 1 0 0 24 2 2583.1056 O95232 O95232 409 432 LUC7L3 Luc7-like protein 3 yes yes 3 4.8306E-06 89.684 By MS/MS By MS/MS 4 4 102860000 43199000 59659000 1556 1583 1757;1758;1759 4043;4044;4045;4046;4047;4048;4049;4050 3989;3990;3991;3992;3993;3994;3995;3996 3991 63;64 2998;2999;7354 8 ESEDKPEIEDVGSDEEEEK EEKEKEEKESEDKPEI GSDEEEEKKDGDKKKK K E S E K K 0 0 0 3 0 0 8 1 0 1 0 2 0 0 1 2 0 0 0 1 0 0 19 1 2191.9128 P07900 P07900 251 269 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2;3 5.8771E-05 119.69 By MS/MS By MS/MS 2 2 4782100000 2417800000 2364300000 1557 1656 1760 4051;4052;4053;4054 3997;3998;3999;4000;4001 4000 3123 5 ESEDKPEIEDVGSDEEEEKK EEKEKEEKESEDKPEI SDEEEEKKDGDKKKKK K E S K K D 0 0 0 3 0 0 8 1 0 1 0 3 0 0 1 2 0 0 0 1 0 0 20 2 2320.0078 P07900 P07900 251 270 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2;3 2.3154E-71 196.92 By MS/MS By MS/MS 3 3 7995600000 4330000000 3665500000 1558 1656 1761 4055;4056;4057;4058;4059;4060 4002;4003;4004;4005;4006;4007 4002 3123 6 ESEDSETQPFDTHLEAYGPCLSPPR ATQPFCLRESEDSETQ GPCLSPPRAIPGDQHP R E S P R A 1 1 0 2 1 1 4 1 1 0 2 0 0 1 4 3 2 0 1 0 0 0 25 0 2861.245 Q14676 Q14676 759 783 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 5.0776E-07 94.456 By MS/MS By MS/MS 1 1 72542000 42345000 30197000 1559 2098 1762 4061;4062 4008;4009;4010 4009 4140 3 ESEGLYGQPGDETYQDIFR ARMNEEMRESEGLYGQ ETYQDIFRDFSQMASN R E S F R D 0 1 0 2 0 2 3 3 0 1 1 0 0 1 1 1 1 0 2 0 0 0 19 0 2202.9706 A0A087X1H5;Q15057 A0A087X1H5 736 754 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 2;3 9.5049E-33 170.26 By MS/MS By MS/MS 4 2 73046000 41863000 31184000 1560 166 1763;1764 4063;4064;4065;4066;4067;4068 4011;4012;4013;4014;4015;4016;4017 4016 270;6874;8001;8002 7 ESEITDEDIDGILER ATHVFASKESEITDED DIDGILERGAKKTAEM K E S E R G 0 1 0 3 0 0 4 1 0 3 1 0 0 0 0 1 1 0 0 0 0 0 15 0 1732.8003 O60264 O60264 666 680 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.0013444 101.6 By MS/MS By matching 1 1 10948000 4485900 6462000 1561 1513 1765 4069;4070 4018 4018 1 ESEKQQDSQPEEVMDVLEMVENVK MEEETEVRESEKQQDS LEMVENVKHVIADQEV R E S V K H 0 0 1 2 0 3 6 0 0 0 1 2 2 0 1 2 0 0 0 4 0 0 24 1 2819.2841 Q9H307 Q9H307 374 397 PNN Pinin yes yes 3 1.0242E-06 96.504 By MS/MS By MS/MS 1 1 39779000 21327000 18452000 1562 2826 1766 4071;4072 4019;4020 4019 1124;1125 5924;5925 1 ESEQESEEEILAQKK NKGTKSLKESEQESEE EEILAQKKEQREEEVE K E S K K E 1 0 0 0 0 2 6 0 0 1 1 2 0 0 0 2 0 0 0 0 0 0 15 1 1775.8425 Q9BW71 Q9BW71 222 236 HIRIP3 HIRA-interacting protein 3 yes yes 2 9.8962E-05 120.21 By MS/MS By MS/MS 1 1 13565000 5677900 7886800 1563 2760 1767 4073;4074 4021;4022 4021 5745;5746 2 ESESEEAEAGAAELR PTSAAEPRESESEEAE EAGAAELRAELALAAG R E S L R A 4 1 0 0 0 0 6 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 15 0 1576.6853 Q8NAF0 Q8NAF0 193 207 ZNF579 Zinc finger protein 579 yes yes 2;3 1.6768E-43 189.33 By MS/MS By MS/MS 2 2 123960000 58931000 65033000 1564 2492 1768 4075;4076;4077;4078 4023;4024;4025;4026 4023 5087;5088 4 ESEVCPVPTNSPSPPPLPPPPPLPK ASEESAHKESEVCPVP PPPPPLPKIQPLEPDS K E S P K I 0 0 1 0 1 0 2 0 0 0 2 1 0 0 12 3 1 0 0 2 0 0 25 0 2629.3462 Q9ULJ3 Q9ULJ3 971 995 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 3 0.012122 62.823 By MS/MS 1 0 0 0 1565 3043 1769 4079 4027 4027 6411 1 ESFDGSVR DTTEETLKESFDGSVR ESFDGSVRARIVTDRE K E S V R A 0 1 0 1 0 0 1 1 0 0 0 0 0 1 0 2 0 0 0 1 0 0 8 0 895.40356 P19338;H7BY16 P19338 590 597 NCL Nucleolin yes no 2 0.025644 84.916 By MS/MS 1 2573000 0 2573000 1566 1732 1770 4080 4028 4028 1 ESGSPYSVLVDTK LSTKVYKRESGSPYSV YSVLVDTKMSKPHLHE R E S T K M 0 0 0 1 0 0 1 1 0 0 1 1 0 0 1 3 1 0 1 2 0 0 13 0 1380.6773 Q9Y2D9;D6RF85 Q9Y2D9 54 66 ZNF652 Zinc finger protein 652 yes no 2 0.0016595 89.231 By MS/MS By MS/MS 1 1 10543000 6892000 3650700 1567 3088 1771 4081;4082 4029;4030 4030 6630 2 ESGVAGDPWKEETDTDLEVVLEK RKKKKKRKESGVAGDP DLEVVLEKKGNMDEAH K E S E K K 1 0 0 3 0 0 5 2 0 0 2 2 0 0 1 1 2 1 0 3 0 0 23 1 2545.2072 Q1ED39 Q1ED39 296 318 KNOP1 Lysine-rich nucleolar protein 1 yes yes 3 3.6855E-05 102.15 By MS/MS By matching 1 1 8468300 3833800 4634500 1568 2172 1772 4083;4084 4031 4031 7616 1 ESGVVAVSPEKSESPQKEDGLSSQLK AAAQAGERESGVVAVS DGLSSQLKSDPVDPDK R E S L K S 1 0 0 1 0 2 4 2 0 0 2 3 0 0 2 6 0 0 0 3 0 0 26 2 2714.361 Q96T58 Q96T58 2113 2138 SPEN Msx2-interacting protein yes yes 3 0.010094 52.549 By MS/MS By MS/MS 1 1 131030000 63262000 67766000 1569 2716 1773 4085;4086 4032;4033 4032 5627;5628;5629 2 ESKEEETSIDVAGKPNEVTK QKANEQKKESKEEETS GKPNEVTKAAESPDQK K E S T K A 1 0 1 1 0 0 5 1 0 1 0 3 0 0 1 2 2 0 0 2 0 0 20 2 2189.0699 P53985 P53985 460 479 SLC16A1 Monocarboxylate transporter 1 yes yes 3 5.0818E-07 132.62 By MS/MS By MS/MS 1 1 184710000 106220000 78489000 1570 1899 1774 4087;4088 4034;4035;4036 4035 3679;7489 3 ESKGSPVFLPR AAAKMDGKESKGSPVF GSPVFLPRKENSSVEA K E S P R K 0 1 0 0 0 0 1 1 0 0 1 1 0 1 2 2 0 0 0 1 0 0 11 1 1215.6612 J3QSD7;Q9NYV4 J3QSD7 418 428 CDK12 Cyclin-dependent kinase 12 yes no 2;3 0.00070289 92.039 By MS/MS By MS/MS 2 2 52683000 30705000 21977000 1571 1361 1775 4089;4090;4091;4092 4037;4038;4039 4039 2516 3 ESLIMNHVLNTSQLASSYQYK HKPVTDMKESLIMNHV LASSYQYKKKYEKSKG K E S Y K K 1 0 2 0 0 2 1 0 1 1 3 1 1 0 0 4 1 0 2 1 0 0 21 0 2425.1948 H0Y786;A0A087X1N7;P20929;H7BZD5 H0Y786 2279 2299 NEB Nebulin yes no 2 0.020611 59.185 By MS/MS 1 0 0 0 1572 168 1776 4093 4040 4040 273;8003;8004 1 ESLPPAAEPSPVSK LDKVADMKESLPPAAE AEPSPVSKEQSKIGKK K E S S K E 2 0 0 0 0 0 2 0 0 0 1 1 0 0 4 3 0 0 0 1 0 0 14 0 1407.7246 Q9NWT1 Q9NWT1 311 324 PAK1IP1 p21-activated protein kinase-interacting protein 1 yes yes 2 0.0048409 80.102 By MS/MS By MS/MS 1 1 19357000 8088800 11268000 1573 2937 1777 4094;4095 4041;4042 4041 6193;6194 2 ESLPVSGEESQLTPEKSPK IDKNAVYKESLPVSGE LTPEKSPKFPDSQNQL K E S P K F 0 0 0 0 0 1 4 1 0 0 2 2 0 0 3 4 1 0 0 1 0 0 19 1 2041.0215 Q9UKA4 Q9UKA4 969 987 AKAP11 A-kinase anchor protein 11 yes yes 3 0.0023428 69.737 By MS/MS 1 5840800 5840800 0 1574 3021 1778 4096 4043 4043 7907 1 ESLTEAEVATEKEGEDGDQPTTPPKPLK EEEEETPKESLTEAEV TTPPKPLKTSKAETPT K E S L K T 2 0 0 2 0 1 6 2 0 0 2 3 0 0 4 1 4 0 0 1 0 0 28 2 2995.451 M0R0Q7;P18858;B4E135 M0R0Q7 161 188 LIG1 DNA ligase;DNA ligase 1 yes no 3 0.0082619 56.461 By matching By MS/MS 1 1 64336000 38760000 25577000 1575 1420 1779 4097;4098 4044 4044 7277;7278 1 ESNTPAPSTQGLPDSWGIIAEPR VNMDFTKRESNTPAPS WGIIAEPRQSAFSNYV R E S P R Q 2 1 1 1 0 1 2 2 0 2 1 0 0 0 4 3 2 1 0 0 0 0 23 0 2422.1765 O14654 O14654 930 952 IRS4 Insulin receptor substrate 4 yes yes 2;3 0.0002486 84.371 By matching By MS/MS 1 2 59280000 26829000 32451000 1576 1453 1780 4099;4100;4101 4045;4046 4045 2683;7287 2 ESNYFGLSPEER EDFDHTSRESNYFGLS FGLSPEERREKQAIEE R E S E R R 0 1 1 0 0 0 3 1 0 0 1 0 0 1 1 2 0 0 1 0 0 0 12 0 1426.6365 Q01804 Q01804 436 447 OTUD4 OTU domain-containing protein 4 yes yes 2 0.0051855 79.804 By MS/MS 1 11183000 11183000 0 1577 1982 1781 4102 4047 4047 3806 1 ESPFSTSASPLLSGSQHFDVPPR HLAAELYRESPFSTSA QHFDVPPRRQLYLPML R E S P R R 1 1 0 1 0 1 1 1 1 0 2 0 0 2 4 6 1 0 0 1 0 0 23 0 2442.1816 O14980 O14980 383 405 XPO1 Exportin-1 yes yes 3 0.00048963 70.897 By MS/MS By MS/MS 3 2 53413000 28527000 24886000 1578 1465 1782 4103;4104;4105;4106;4107 4048;4049;4050;4051;4052 4052 2724;2725;7294 5 ESPGAPPAFASPPDPWGR SGAVFAQKESPGAPPA SPPDPWGRLHRSPLTF K E S G R L 3 1 0 1 0 0 1 2 0 0 0 0 0 1 6 2 0 1 0 0 0 0 18 0 1834.8638 J3KNZ9;Q9HAH7 J3KNZ9 729 746 FBRS Probable fibrosin-1 yes no 2 0.014371 62.94 By matching By MS/MS 1 1 8491400 4370700 4120600 1579 1324 1783 4108;4109 4053 4053 2453 1 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR EGTGQQERESPRPLQL AGAAGAGRRDFVEAPP R E S G R R 8 2 0 1 0 1 5 13 0 1 2 0 0 0 5 2 0 0 0 0 0 0 40 1 3526.6673 Q6PKG0;A0A0B4J210 Q6PKG0 74 113 LARP1 La-related protein 1 yes no 4 3.3541E-13 85.331 By MS/MS By MS/MS 1 1 189070000 94598000 94471000 1580 2330 1784 4110;4111 4054;4055 4055 4694 2 ESQLAHIKDEPPPLSPAPLTPATPSSLDPFFSR KPPVRDTRESQLAHIK SLDPFFSREPSSMHIS R E S S R E 3 1 0 2 0 1 2 0 1 1 4 1 0 2 8 5 2 0 0 0 0 0 33 1 3541.8093 Q7Z6Z7;H0Y659 Q7Z6Z7 3905 3937 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 3;4 0.00017768 62.291 By MS/MS By MS/MS 1 2 106550000 33973000 72579000 1581 2394 1785;1786 4112;4113;4114 4056;4057 4056 4885;4886;7692 2 ESQMTPSHGGSPVGPPQLPIMSSLR PGRPPKNRESQMTPSH LPIMSSLRQRKRGRSP R E S L R Q 0 1 0 0 0 2 1 3 1 1 2 0 2 0 5 5 1 0 0 1 0 0 25 0 2589.2679 P55201 P55201 916 940 BRPF1 Peregrin yes yes 3 0.0090795 50.189 By MS/MS 1 10125000 10125000 0 1582 1912 1787 4115 4058 4058 744;745 3697 1 ESRSPQQSAALPR PKAALEPKESRSPQQS QQSAALPRRYMLRERE K E S P R R 2 2 0 0 0 2 1 0 0 0 1 0 0 0 2 3 0 0 0 0 0 0 13 1 1425.7324 A0A0A6YYG7;Q6IBW4;E5RJN3 A0A0A6YYG7 281 293 NCAPH2 Condensin-2 complex subunit H2 yes no 2;3 0.0092871 69.314 By MS/MS By MS/MS 2 2 75209000 40305000 34904000 1583 282 1788 4116;4117;4118;4119 4059;4060;4061 4060 501 2 ESSANNSVSPSESLR HELDHRERESSANNSV VSPSESLRASEKHRGS R E S L R A 1 1 2 0 0 0 2 0 0 0 1 0 0 0 1 6 0 0 0 1 0 0 15 0 1562.7172 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726 H0YKH0 195 209 TLE3 Transducin-like enhancer protein 3 yes no 2 4.0424E-67 207.05 By MS/MS By MS/MS 1 1 158610000 82987000 75628000 1584 986 1789 4120;4121 4062;4063;4064 4062 1849 3 ESSIIAPAPAEDVDTPPR QVYEFRVKESSIIAPA EDVDTPPRKKKRKHRL K E S P R K 3 1 0 2 0 0 2 0 0 2 0 0 0 0 4 2 1 0 0 1 0 0 18 0 1863.9214 Q15910 Q15910 473 490 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 2;3 0.00026311 93.404 By MS/MS By MS/MS 2 2 422030000 239470000 182560000 1585 2159 1790 4122;4123;4124;4125 4065;4066;4067;4068;4069;4070;4071 4068 7605 6 ESSIIAPAPAEDVDTPPRK QVYEFRVKESSIIAPA DVDTPPRKKKRKHRLW K E S R K K 3 1 0 2 0 0 2 0 0 2 0 1 0 0 4 2 1 0 0 1 0 0 19 1 1992.0164 Q15910 Q15910 473 491 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 3 0.001931 81.51 By MS/MS By matching 1 1 23944000 13336000 10608000 1586 2159 1791 4126;4127 4072 4072 7605 1 ESSIIAPAPAEDVDTPPRKK QVYEFRVKESSIIAPA VDTPPRKKKRKHRLWA K E S K K K 3 1 0 2 0 0 2 0 0 2 0 2 0 0 4 2 1 0 0 1 0 0 20 2 2120.1113 Q15910 Q15910 473 492 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 3 0.003295 71.601 By MS/MS 1 3411000 3411000 0 1587 2159 1792 4128 4073 4073 7605 1 ESSPEKEAEEGCPEKESEEGCPK GASENNAKESSPEKEA ESEEGCPKRGFEGSCS K E S P K R 1 0 0 0 2 0 9 2 0 0 0 3 0 0 3 3 0 0 0 0 0 0 23 2 2621.0745 O43719 O43719 451 473 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.025539 52.273 By MS/MS By matching 1 1 146600000 72704000 73893000 1588 1505 1793 4129;4130 4074 4074 2819 1 ESSPIPSPTSDRK TEQRTSSKESSPIPSP PSPTSDRKAKTALPAQ K E S R K A 0 1 0 1 0 0 1 0 0 1 0 1 0 0 3 4 1 0 0 0 0 0 13 1 1399.6943 A0A087WUZ3;Q01082 A0A087WUZ3 2165 2177 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.02149 40.015 By matching By MS/MS 1 1 19389000 10233000 9156000 1589 67 1794 4131;4132 4075 4075 120;121 0 ESSPLYSPTFSDSTSAVK DISPLTPRESSPLYSP SDSTSAVKEKTATCHS R E S V K E 1 0 0 1 0 0 1 0 0 0 1 1 0 1 2 6 2 0 1 1 0 0 18 0 1901.8895 P46821 P46821 1791 1808 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 3.9137E-16 127.79 By MS/MS By MS/MS 4 5 218460000 96902000 121560000 1590 1840 1795;1796 4133;4134;4135;4136;4137;4138;4139;4140;4141 4076;4077;4078;4079;4080;4081;4082;4083 4078 3493;3494;3495;8270 6 ESSPPREEAPPPPPPTEDSCAK RQQSQPAKESSPPREE PTEDSCAKKPRSRTKI K E S A K K 2 1 0 1 1 0 4 0 0 0 0 1 0 0 8 3 1 0 0 0 0 0 22 1 2374.0747 C9JR56;Q9UPW6 C9JR56 533 554 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 yes no 3 0.00074608 71.434 By MS/MS By MS/MS 1 1 37793000 17808000 19985000 1591 687 1797 4142;4143 4084;4085;4086;4087;4088;4089 4088 1266;1267 6 ESSSPLSSNQSEPGSIALNSYHSR SHLTPIERESSSPLSS ALNSYHSRNCSESDHS R E S S R N 1 1 2 0 0 1 2 1 1 1 2 0 0 0 2 9 0 0 1 0 0 0 24 0 2533.1681 P15260 P15260 377 400 IFNGR1 Interferon gamma receptor 1 yes yes 3 0.011829 47.288 By MS/MS 1 6201900 6201900 0 1592 1704 1798 4144 4090 4090 3205 1 ESSTESSQSAKPVSGQDTSGNTEGSPAAEK ILGEGTPKESSTESSQ EGSPAAEKAQLKSEAA K E S E K A 3 0 1 1 0 2 4 3 0 0 0 2 0 0 2 8 3 0 0 1 0 0 30 1 2952.3068 Q96S66 Q96S66 485 514 CLCC1 Chloride channel CLIC-like protein 1 yes yes 3 5.588E-05 71.159 By MS/MS By matching 1 1 31887000 15410000 16478000 1593 2709 1799 4145;4146 4091 4091 5590 1 ESSTFTDENPSETEESEAAGGIGKLEGEDGDVK LNVDPLLKESSTFTDE EGEDGDVKCLSEKDTY K E S V K C 2 0 1 3 0 0 8 5 0 1 1 2 0 1 1 4 3 0 0 1 0 0 33 1 3413.4754 A0A1B0GUH9;A0A1P0AZG4 A0A1B0GUH9 721 753 yes no 3 8.7784E-07 75.939 By MS/MS By MS/MS 1 1 62117000 28728000 33389000 1594 419 1800 4147;4148 4092;4093;4094 4092 781;6952 3 ESTESSNTTIEDEDVK LKKPDGVKESTESSNT TIEDEDVKARKQEIIK K E S V K A 0 0 1 2 0 0 4 0 0 1 0 1 0 0 0 3 3 0 0 1 0 0 16 0 1782.7643 H0Y9J2;D6R938;E9PBG7;E9PF82;Q13557 H0Y9J2 33 48 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 2 0.014376 75.998 By matching By MS/MS 1 1 9036200 4791500 4244700 1595 725 1801 4149;4150 4095 4095 7047;7048 0 ESTGNMVTGQTVCK STQEKNPRESTGNMVT VTGQTVCKNKPNMSDP R E S C K N 0 0 1 0 1 1 1 2 0 0 0 1 1 0 0 1 3 0 0 2 0 0 14 0 1510.6756 Q15021;E7EN77 Q15021 584 597 NCAPD2 Condensin complex subunit 1 yes no 2 0.0044561 77.754 By MS/MS By matching 1 1 10710000 7036100 3673900 1596 2118 1802 4151;4152 4096 4096 844 7588 1 ESTHQSEDVFLPSPR SYLSDNTRESTHQSED DVFLPSPRDCFPYNNY R E S P R D 0 1 0 1 0 1 2 0 1 0 1 0 0 1 2 3 1 0 0 1 0 0 15 0 1727.8115 A0A0A0MSK6;Q13017 A0A0A0MSK6 956 970 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 0.00076024 82.865 By MS/MS 1 4283500 4283500 0 1597 252 1803 4153 4097 4097 440 1 ESTSSKSPPR EMFETAIKESTSSKSP TSSKSPPRKINSSPNV K E S P R K 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 4 1 0 0 0 0 0 10 1 1074.5306 P78347 P78347 817 826 GTF2I General transcription factor II-I yes yes 2;3 2.7292E-05 152.96 By MS/MS By MS/MS 2 3 214980000 146460000 68519000 1598 1962 1804 4154;4155;4156;4157;4158 4098;4099;4100;4101;4102;4103;4104;4105 4100 3743;3744;3745 8 ESTSSKSPPRK EMFETAIKESTSSKSP SSKSPPRKINSSPNVN K E S R K I 0 1 0 0 0 0 1 0 0 0 0 2 0 0 2 4 1 0 0 0 0 0 11 2 1202.6255 P78347 P78347 817 827 GTF2I General transcription factor II-I yes yes 3 0.026263 62.077 By MS/MS 1 25909000 0 25909000 1599 1962 1805 4159 4106 4106 3743;3744;3745 1 ESVIESSGAISQTPEQATHNSER EGERPCHRESVIESSG QATHNSERETEQTPAL R E S E R E 2 1 1 0 0 2 4 1 1 2 0 0 0 0 1 5 2 0 0 1 0 0 23 0 2456.1415 F5GY04;Q01954 F5GY04 605 627 BNC1 Zinc finger protein basonuclin-1 yes no 3 0.026733 49.973 By MS/MS 1 0 0 0 1600 946 1806 4160 4107 4107 1776;1777 1 ESVNSPVFGK EKEKRTSKESVNSPVF VNSPVFGKASLLTGGL K E S G K A 0 0 1 0 0 0 1 1 0 0 0 1 0 1 1 2 0 0 0 2 0 0 10 0 1062.5346 E7ESJ3;Q9UPS8 E7ESJ3 643 652 ANKRD26 Ankyrin repeat domain-containing protein 26 yes no 2 0.0080839 77.674 By MS/MS By matching 1 1 14912000 6988400 7923500 1601 815 1807 4161;4162 4108 4108 1478 1 ESVPEFPLSPPK LILSPRSKESVPEFPL EFPLSPPKKKDLSLEE K E S P K K 0 0 0 0 0 0 2 0 0 0 1 1 0 1 4 2 0 0 0 1 0 0 12 0 1325.6867 A2A2D0;P16949 A2A2D0 30 41 STMN1 Stathmin yes no 2 5.8226E-14 155.14 By MS/MS By MS/MS 1 1 326130000 175170000 150960000 1602 447 1808 4163;4164 4109;4110;4111;4112;4113;4114;4115;4116;4117 4115 837 9 ESVPEFPLSPPKKK LILSPRSKESVPEFPL PLSPPKKKDLSLEEIQ K E S K K D 0 0 0 0 0 0 2 0 0 0 1 3 0 1 4 2 0 0 0 1 0 0 14 2 1581.8766 A2A2D0;P16949 A2A2D0 30 43 STMN1 Stathmin yes no 2;3 0.0012485 102.72 By MS/MS By MS/MS 2 2 109600000 64937000 44668000 1603 447 1809 4165;4166;4167;4168 4118;4119;4120;4121;4122 4119 837 5 ESVSPEDSEK TKSSPAKKESVSPEDS VSPEDSEKKRTNYQAY K E S E K K 0 0 0 1 0 0 3 0 0 0 0 1 0 0 1 3 0 0 0 1 0 0 10 0 1105.4775 P35251 P35251 365 374 RFC1 Replication factor C subunit 1 yes yes 2 0.00052788 129.74 By MS/MS By MS/MS 1 2 35692000 13645000 22047000 1604 1793 1810 4169;4170;4171 4123;4124 4124 3381 2 ESVSTEDLSPPSPPLPK VKDSWLLKESVSTEDL PPSPPLPKENLREEAS K E S P K E 0 0 0 1 0 0 2 0 0 0 2 1 0 0 5 4 1 0 0 1 0 0 17 0 1778.8938 Q13127 Q13127 853 869 REST RE1-silencing transcription factor yes yes 2 0.00042295 108.25 By MS/MS By matching 1 1 6606900 3787100 2819800 1605 2042 1811 4172;4173 4125 4125 4009 1 ESYCQRQGVPMNSLR TTHLKKLKESYCQRQG GVPMNSLRFLFEGQRI K E S L R F 0 2 1 0 1 2 1 1 0 0 1 0 1 0 1 2 0 0 1 1 0 0 15 1 1823.8407 B8ZZ67;B8ZZN6;P63165 B8ZZ67 10 24 SUMO1 Small ubiquitin-related modifier 1 yes no 2 0.031536 44.543 By MS/MS 1 0 0 0 1606 603 1812 4174 4126 4126 238 1 ESYDAPPTPSGAR DGGETESRESYDAPPT PPTPSGARLIPDFPVA R E S A R L 2 1 0 1 0 0 1 1 0 0 0 0 0 0 3 2 1 0 1 0 0 0 13 0 1346.6103 Q96S55 Q96S55 109 121 WRNIP1 ATPase WRNIP1 yes yes 2 0.0040794 89.136 By MS/MS By MS/MS 1 1 47398000 26597000 20801000 1607 2708 1813 4175;4176 4127;4128;4129 4127 7808 3 ESYSIYVYK KKRKRGRKESYSIYVY SYSIYVYKVLKQVHPD K E S Y K V 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 2 0 0 3 1 0 0 9 0 1150.5546 Q8N257;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03 Q8N257 36 44 HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST2H2BD;HIST2H2BC Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C yes no 2 0.013294 84.568 By MS/MS By matching 1 1 23209000 12443000 10766000 1608 1648 1814 4177;4178 4130 4130 1 ESYSVYVYK KKRKRSRKESYSVYVY SYSVYVYKVLKQVHPD K E S Y K V 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 3 2 0 0 9 0 1136.539 U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814 U3KQK0 36 44 HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K yes no 2 0.01904 79.713 By MS/MS By MS/MS 1 1 27668000 14381000 13287000 1609 1528 1815 4179;4180 4131;4132 4131 2 ESYTEEIVSEAESHVSGISR KPKVTPTKESYTEEIV SHVSGISRIVLPTEKT K E S S R I 1 1 0 0 0 0 5 1 1 2 0 0 0 0 0 5 1 0 1 2 0 0 20 0 2208.0182 J3KP30;Q5QJE6;E9PRB3 J3KP30 133 152 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2;3 0.00043678 106.7 By matching By MS/MS 1 2 78166000 2430600 75735000 1610 1325 1816 4181;4182;4183 4133;4134 4133 2457;7248 2 ETAAAAAGAVGPPGSWGAEPSSPAFEQLSR RNTLRQEKETAAAAAG PAFEQLSRGQTPFAGT K E T S R G 8 1 0 0 0 1 3 4 0 0 1 0 0 1 4 4 1 1 0 1 0 0 30 0 2868.3678 O14686 O14686 2705 2734 KMT2D Histone-lysine N-methyltransferase 2D yes yes 3 0.00018864 65.151 By MS/MS By MS/MS 1 1 23640000 11973000 11667000 1611 1454 1817 4184;4185 4135;4136 4135 2695;2696 2 ETAVPGPLGIEDISPNLSPDDK PSRTTGTRETAVPGPL PNLSPDDKSFSRVVPR R E T D K S 1 0 1 3 0 0 2 2 0 2 2 1 0 0 4 2 1 0 0 1 0 0 22 0 2263.122 Q12888;A6NNK5 Q12888 1413 1434 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 7.3245E-12 141.91 By MS/MS By MS/MS 2 2 145300000 71174000 74123000 1612 2031 1818;1819 4186;4187;4188;4189 4137;4138;4139;4140 4140 3950;3951 4 ETAVPGPLGIEDISPNLSPDDKSFSR PSRTTGTRETAVPGPL PDDKSFSRVVPRVPDS R E T S R V 1 1 1 3 0 0 2 2 0 2 2 1 0 1 4 4 1 0 0 1 0 0 26 1 2740.3556 Q12888;A6NNK5 Q12888 1413 1438 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.00010104 76.765 By MS/MS 1 13035000 0 13035000 1613 2031 1820 4190 4141 4141 3950;3951 1 ETCVSGEDPTQGADLSPDEK AKELVKLKETCVSGED ADLSPDEKVLSKPPEG K E T E K V 1 0 0 3 1 1 3 2 0 0 1 1 0 0 2 2 2 0 0 1 0 0 20 0 2133.9008 Q02952 Q02952 468 487 AKAP12 A-kinase anchor protein 12 yes yes 2 0.0015928 95.622 By MS/MS 1 6215600 0 6215600 1614 1991 1821 4191 4142 4142 3823 0 ETDVFWKSLDFK SLAKTIKKETDVFWKS FWKSLDFKEQVAEETS K E T F K E 0 0 0 2 0 0 1 0 0 0 1 2 0 2 0 1 1 1 0 1 0 0 12 1 1513.7453 P35251 P35251 545 556 RFC1 Replication factor C subunit 1 yes yes 2;3 1.0451E-13 155.43 By MS/MS By MS/MS 2 1 6112100 0 6112100 1615 1793 1822 4192;4193;4194 4143;4144;4145 4145 3382 3 ETDYPAGEDLSESGQVDK IASVPGARETDYPAGE SESGQVDKASLCGSMT R E T D K A 1 0 0 3 0 1 3 2 0 0 1 1 0 0 1 2 1 0 1 1 0 0 18 0 1938.8331 O60271;A0A087X2D8;H0YBS5 O60271 803 820 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2 0.0035016 75.91 By MS/MS By MS/MS 1 1 13157000 7456600 5700800 1616 1514 1823 4195;4196 4146;4147 4147 2851;2852 2 ETEAAPTSPPIVPLK TSGSKTGRETEAAPTS SPPIVPLKSRHLVAAA R E T L K S 2 0 0 0 0 0 2 0 0 1 1 1 0 0 4 1 2 0 0 1 0 0 15 0 1548.8399 A0A0J9YVS1;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3 A0A0J9YVS1 1011 1025 KANSL1 KAT8 regulatory NSL complex subunit 1 yes no 2 0.00073586 109.07 By MS/MS By MS/MS 1 1 24615000 13461000 11154000 1617 358 1824 4197;4198 4148;4149 4149 643 2 ETENDDLTNVIQK QALLHIIRETENDDLT DLTNVIQKMICEYSEE R E T Q K M 0 0 2 2 0 1 2 0 0 1 1 1 0 0 0 0 2 0 0 1 0 0 13 0 1517.7209 O95373 O95373 552 564 IPO7 Importin-7 yes yes 2 0.0030435 91.549 By MS/MS By MS/MS 1 1 10732000 5069800 5662500 1618 1592 1825 4199;4200 4150;4151 4151 2 ETEPLVSPHQDK KKSESPFRETEPLVSP LVSPHQDKLMSMPVMT R E T D K L 0 0 0 1 0 1 2 0 1 0 1 1 0 0 2 1 1 0 0 1 0 0 12 0 1378.6729 H7C3H4;Q9BYW2;H7BZ93;C9JG86;H7BXT4 H7C3H4 382 393 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.010862 73.273 By MS/MS By MS/MS 1 1 10391000 5818600 4572800 1619 1284 1826 4201;4202 4152;4153 4153 7233 1 ETERASPIKMDLAPSK AKDVTLLKETERASPI KMDLAPSKDMGPPKEN K E T S K D 2 1 0 1 0 0 2 0 0 1 1 2 1 0 2 2 1 0 0 0 0 0 16 2 1771.9138 E7EVA0;P27816 E7EVA0 370 385 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0020665 87.228 By MS/MS By MS/MS 1 1 47708000 22906000 24802000 1620 828 1827 4203;4204 4154;4155 4155 1535;7094 2 ETFSSAEGTVDKDTTIMELR DAERKQERETFSSAEG DTTIMELRDRLPKKQQ R E T L R D 1 1 0 2 0 0 3 1 0 1 1 1 1 1 0 2 4 0 0 1 0 0 20 1 2229.0471 P46100;A0A096LNL9;A0A096LNW1 P46100 886 905 ATRX Transcriptional regulator ATRX yes no 3 0.0018209 70.174 By MS/MS By matching 1 1 24542000 12797000 11745000 1621 1837 1828 4205;4206 4156 4156 700 3475 1 ETGFSHSQITRLYSR EELEEIKKETGFSHSQ QITRLYSRFTSLDKGE K E T S R F 0 2 0 0 0 1 1 1 1 1 1 0 0 1 0 3 2 0 1 0 0 0 15 1 1780.8856 H0YKE7;F5GX29;H0YNG9;Q99653 H0YKE7 20 34 CHP1 Calcineurin B homologous protein 1 yes no 2 0.027045 55.401 By MS/MS 1 0 0 0 1622 945 1829 4207 4157 4157 1774;1775 1 ETINNLDTSSSDFTILQEIEEPSLEPENEK QEHAIEDKETINNLDT SLEPENEKILDILGET K E T E K I 0 0 3 2 0 1 7 0 0 3 3 1 0 1 2 4 3 0 0 0 0 0 30 0 3420.5944 Q15424 Q15424 187 216 SAFB Scaffold attachment factor B1 yes yes 3 6.2085E-10 106.72 By MS/MS By MS/MS 1 1 75563000 50859000 24704000 1623 2139 1830 4208;4209 4158;4159 4158 4240;4241 2 ETLDPCDVVSVQVDAFNKDLK E T L K 1 0 1 4 1 1 1 0 0 0 2 2 0 1 1 1 1 0 0 4 0 0 21 1 2391.1628 REV__E9PR95 yes no 3 0.0075951 55.846 By MS/MS 1 32142000 0 32142000 + 1624 3160 1831 4210 4160 4160 6759 1 ETLPSIWDSPTK FLNAKGQKETLPSIWD SIWDSPTKQLSVVVPS K E T T K Q 0 0 0 1 0 0 1 0 0 1 1 1 0 0 2 2 2 1 0 0 0 0 12 0 1372.6874 Q9Y673 Q9Y673 54 65 ALG5 Dolichyl-phosphate beta-glucosyltransferase yes yes 2 0.0016859 89.624 By MS/MS By MS/MS 1 1 7797400 4325400 3472000 1625 3143 1832 4211;4212 4161;4162 4162 6726 2 ETPHSPGVEDAPIAK PAQLANARETPHSPGV VEDAPIAKVGVLAASM R E T A K V 2 0 0 1 0 0 2 1 1 1 0 1 0 0 3 1 1 0 0 1 0 0 15 0 1546.7627 Q9UHB6;F8VS07;F8VQE1 Q9UHB6 486 500 LIMA1 LIM domain and actin-binding protein 1 yes no 2;3 0.00022423 97.69 By MS/MS By MS/MS 2 2 607400000 316170000 291230000 1626 3003 1833 4213;4214;4215;4216 4163;4164;4165;4166 4165 6320;7900 4 ETPPNGNLSPAPR KGKLGGPKETPPNGNL GNLSPAPRLRRDYSYE K E T P R L 1 1 2 0 0 0 1 1 0 0 1 0 0 0 4 1 1 0 0 0 0 0 13 0 1348.6735 P48634 P48634 996 1008 PRRC2A Protein PRRC2A yes yes 2 0.0044499 82.069 By MS/MS By MS/MS 2 2 62088000 33260000 28829000 1627 1846 1834;1835 4217;4218;4219;4220 4167;4168;4169;4170;4171;4172;4173;4174;4175;4176 4169 86;87 3541 10 ETQSPEQVK SERITVKKETQSPEQV TQSPEQVKSEKLKDLF K E T V K S 0 0 0 0 0 2 2 0 0 0 0 1 0 0 1 1 1 0 0 1 0 0 9 0 1044.5088 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 493 501 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.025609 61.765 By MS/MS 1 10260000 10260000 0 1628 2947 1836 4221 4177 4177 6214 1 ETQSPEQVKSEK SERITVKKETQSPEQV PEQVKSEKLKDLFDYS K E T E K L 0 0 0 0 0 2 3 0 0 0 0 2 0 0 1 2 1 0 0 1 0 0 12 1 1388.6783 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 493 504 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 8.832E-40 155.88 By MS/MS By MS/MS 1 2 26687000 8643300 18044000 1629 2947 1837 4222;4223;4224 4178;4179;4180 4180 6214 2 ETRISFVEEDVHPK GRSPQRLKETRISFVE VEEDVHPKWIPGAADD K E T P K W 0 1 0 1 0 0 3 0 1 1 0 1 0 1 1 1 1 0 0 2 0 0 14 1 1684.842 Q8WYP5 Q8WYP5 1228 1241 AHCTF1 Protein ELYS yes yes 3 3.5151E-17 152.68 By MS/MS By MS/MS 1 1 41482000 23651000 17831000 1630 2575 1838 4225;4226 4181;4182 4182 7756 2 ETRSVMNTSNPK GVVIYTGKETRSVMNT VMNTSNPKNKVGLLDL K E T P K N 0 1 2 0 0 0 1 0 0 0 0 1 1 0 1 2 2 0 0 1 0 0 12 1 1362.6562 F6XUP2;O43861 F6XUP2 304 315 ATP9B Probable phospholipid-transporting ATPase IIB yes no 2 0.028744 48.091 By MS/MS 1 0 0 0 1631 998 1839 4227 4183 4183 363 1 ETSAATLSPGASSR LEVSPGSRETSAATLS LSPGASSRGWDDGDTR R E T S R G 3 1 0 0 0 0 1 1 0 0 1 0 0 0 1 4 2 0 0 0 0 0 14 0 1333.6474 A0A087WTU3;Q9Y6I9 A0A087WTU3 163 176 TEX264 Testis-expressed sequence 264 protein yes no 2 0.0012753 92.269 By MS/MS By MS/MS 1 1 40813000 21277000 19536000 1632 44 1840 4228;4229 4184;4185 4184 83 2 ETSFGSSENITMTSLSK ATSILQKKETSFGSSE ITMTSLSKVTTFVSED K E T S K V 0 0 1 0 0 0 2 1 0 1 1 1 1 1 0 5 3 0 0 0 0 0 17 0 1817.8353 Q9UMZ2;A0A087WZS7 Q9UMZ2 930 946 SYNRG Synergin gamma yes no 2 6.4377E-08 134.4 By MS/MS By MS/MS 1 1 60458000 32369000 28089000 1633 3056 1841 4230;4231 4186;4187 4187 1211 6452 2 ETSSDVALASHILTALR AVDTGISRETSSDVAL SHILTALREKQAPELS R E T L R E 3 1 0 1 0 0 1 0 1 1 3 0 0 0 0 3 2 0 0 1 0 0 17 0 1782.9476 O00273 O00273 230 246 DFFA DNA fragmentation factor subunit alpha yes yes 2 0.028692 58.595 By MS/MS By matching 1 1 9471200 5512800 3958400 1634 1432 1842 4232;4233 4188 4188 1 ETSVSKEDTDHEEK SDVEVEEKETSVSKED EDTDHEEKASNEDVTK K E T E K A 0 0 0 2 0 0 4 0 1 0 0 2 0 0 0 2 2 0 0 1 0 0 14 1 1632.7115 O75475 O75475 114 127 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 0.0049079 86.411 By MS/MS 1 0 0 0 1635 1547 1843 4234 4189 4189 7337 1 ETVFTKSPYQEFTDHLVK YLTPDLWKETVFTKSP EFTDHLVKTHTRVSVQ K E T V K T 0 0 0 1 0 1 2 0 1 0 1 2 0 2 1 1 3 0 1 2 0 0 18 1 2168.079 H0YEN5;E9PQD7;P15880 H0YEN5 160 177 RPS2 40S ribosomal protein S2 yes no 3 0.00013247 104.78 By MS/MS By MS/MS 1 1 25349000 15342000 10007000 1636 927 1844 4235;4236 4190;4191 4190 1727 2 ETVQKSVCVLSK VRQADITRETVQKSVC KSVCVLSKLPLYGLLQ R E T S K L 0 0 0 0 1 1 1 0 0 0 1 2 0 0 0 2 1 0 0 3 0 0 12 1 1376.7334 H7C0I1;B8ZZW5;Q8NBF6 H7C0I1 43 54 AVL9 Late secretory pathway protein AVL9 homolog yes no 2 0.010898 76.073 By MS/MS 1 0 0 0 1637 608 1845 4237 4192 4192 1096 1 ETVQTTQSPTPVEK VKSSEPVKETVQTTQS QSPTPVEKETVVTTQA K E T E K E 0 0 0 0 0 2 2 0 0 0 0 1 0 0 2 1 4 0 0 2 0 0 14 0 1543.773 A0A0A0MT33;Q9UPN6 A0A0A0MT33 688 701 SCAF8 Protein SCAF8 yes no 2;3 0.0015062 114.21 By MS/MS By MS/MS 2 2 110980000 66927000 44051000 1638 263 1846 4238;4239;4240;4241 4193;4194;4195 4193 456;6912;6913 3 ETVSEAPPLLFSDEEEKEAQLGVK VPPATKKKETVSEAPP KEAQLGVKSVDKKVES K E T V K S 2 0 0 1 0 1 6 1 0 0 3 2 0 1 2 2 1 0 0 2 0 0 24 1 2644.312 F8W7U3;E7ESD2;Q641Q2;A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1 F8W7U3 629 652 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 3 0.00013061 77.668 By MS/MS By MS/MS 1 1 94282000 47320000 46963000 1639 814;183 1847 4242;4243 4196;4197 4196 308 2 ETYYLSDSPLLGPPVGEPR KSPTSLKRETYYLSDS GPPVGEPRLLASSPAL R E T P R L 0 1 0 1 0 0 2 2 0 0 3 0 0 0 4 2 1 0 2 1 0 0 19 0 2089.0368 Q9NYZ3 Q9NYZ3 145 163 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.00061098 93.348 By MS/MS By matching 1 1 9457600 4974700 4482800 1640 2952 1848 4244;4245 4198 4198 6221 1 EVADIFNAPSDDEEFVGFR ATRYQIPKEVADIFNA DEEFVGFRDDVPMETL K E V F R D 2 1 1 3 0 0 3 1 0 1 0 0 0 3 1 1 0 0 0 2 0 0 19 0 2155.9698 Q96GN5 Q96GN5 12 30 CDCA7L Cell division cycle-associated 7-like protein yes yes 2 1.6803E-118 223.11 By MS/MS 1 76168000 0 76168000 1641 2654 1849 4246 4199 4199 5476 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLR DATKEKPKEVAENQQN AESQSSLRRQKREKET K E V L R R 3 1 2 1 0 5 6 1 0 0 1 1 0 0 4 6 0 0 0 1 0 0 32 1 3452.5564 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 29 60 EPB41L2 Band 4.1-like protein 2 yes no 3 7.8331E-05 65.899 By MS/MS By matching 1 1 44750000 25531000 19218000 1642 1502 1850 4247;4248 4200 4200 2804;2805 1 EVCGEKQRFEK LSAFDNFKEVCGEKQR GEKQRFEKLMEHFRNE K E V E K L 0 1 0 0 1 1 3 1 0 0 0 2 0 1 0 0 0 0 0 1 0 0 11 2 1408.6769 Q96PY5 Q96PY5 292 302 FMNL2 Formin-like protein 2 yes yes 2 0.0174 68.735 By MS/MS 1 4940000 4940000 0 1643 2698 1851 4249 4201 4201 1 EVDDLGPEVGDIK EACKRIKREVDDLGPE GPEVGDIKIIPLYSTL R E V I K I 0 0 0 3 0 0 2 2 0 1 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1384.6722 O43143 O43143 372 384 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 2 0.0023098 94.82 By matching By MS/MS 1 1 11523000 5877300 5645200 1644 1486 1852 4250;4251 4202 4202 1 EVDEQMLNVQNK FRGRMSMKEVDEQMLN QMLNVQNKNSSYFVEW K E V N K N 0 0 2 1 0 2 2 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 12 0 1445.682 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 Q5JP53 307 318 TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain no no 2 6.103E-14 159.58 By MS/MS By MS/MS 1 1 66974000 31378000 35596000 1645 1653;1958 1853 4252;4253 4203;4204 4204 605 2 EVDFDSDPMEECLR VDYSALEKEVDFDSDP DPMEECLRIFNESTSV K E V L R I 0 1 0 3 1 0 3 0 0 0 1 0 1 1 1 1 0 0 0 1 0 0 14 0 1740.6971 Q8N1G1 Q8N1G1 605 618 REXO1 RNA exonuclease 1 homolog yes yes 2 6.5519E-07 129.01 By MS/MS By MS/MS 2 2 47016000 25056000 21961000 1646 2459 1854;1855 4254;4255;4256;4257 4205;4206;4207;4208 4207 996 5031 4 EVDGLLTSEPMGSPVSSK EEPKGKEKEVDGLLTS MGSPVSSKTESVSDKE K E V S K T 0 0 0 1 0 0 2 2 0 0 2 1 1 0 2 4 1 0 0 2 0 0 18 0 1831.8873 Q8WWM7;H3BUF6 Q8WWM7 582 599 ATXN2L Ataxin-2-like protein yes no 2;3 2.5741E-65 194.3 By MS/MS By MS/MS 4 3 437170000 220060000 217110000 1647 2564 1856;1857 4258;4259;4260;4261;4262;4263;4264 4209;4210;4211;4212;4213;4214;4215 4211 1026 5239;5240 7 EVDYSGLR EWKELEQKEVDYSGLR EVDYSGLRVQAMQISS K E V L R V 0 1 0 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 8 0 937.45051 Q9UKY7;H0Y8K3 Q9UKY7 92 99 CDV3 Protein CDV3 homolog yes no 2 0.016319 96.19 By MS/MS By matching 1 1 30679000 15505000 15174000 1648 3034 1858 4265;4266 4216 4216 8498 1 EVEDKESEGEEEDEDEDLSK VGPASILKEVEDKESE DEDEDLSKYKLDEDED K E V S K Y 0 0 0 4 0 0 9 1 0 0 1 2 0 0 0 2 0 0 0 1 0 0 20 1 2338.9296 O95218 O95218 147 166 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 5.9651E-17 151.03 By MS/MS By MS/MS 1 1 811280000 484770000 326520000 1649 1582 1859 4267;4268 4217;4218;4219;4220 4219 2996 4 EVEDKESEGEEEDEDEDLSKYK VGPASILKEVEDKESE DEDLSKYKLDEDEDED K E V Y K L 0 0 0 4 0 0 9 1 0 0 1 3 0 0 0 2 0 0 1 1 0 0 22 2 2630.0879 O95218 O95218 147 168 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 2.2573E-07 130.81 By MS/MS By MS/MS 1 1 137220000 59578000 77639000 1650 1582 1860 4269;4270 4221;4222 4222 2996 2 EVELVSE KKKKKKAKEVELVSE_ KEVELVSE________ K E V S E - 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 803.39126 O60832 O60832 508 514 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 1;2 0.0065718 149.65 By MS/MS By MS/MS 2 1 217910000 195210000 22693000 1651 1530 1861 4271;4272;4273 4223;4224;4225 4223 2890 3 EVFAFFSHQLLDSLQK DEFKKECKEVFAFFSH QLLDSLQKATRLSLDT K E V Q K A 1 0 0 1 0 2 1 0 1 0 3 1 0 3 0 2 0 0 0 1 0 0 16 0 1907.9781 H0Y7V4;A0A075B6F3;Q96JB1 H0Y7V4 1054 1069 DNAH8 Dynein heavy chain 8, axonemal yes no 2 0.025317 56.215 By MS/MS 1 4028600 4028600 0 1652 9 1862 4274 4226 4226 14;15 0 EVFEDAAEIR KVTQDELKEVFEDAAE FEDAAEIRLVSKDGKS K E V I R L 2 1 0 1 0 0 3 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 10 0 1177.5615 P19338;H7BY16 P19338 411 420 NCL Nucleolin yes no 2 0.011867 96.948 By MS/MS By matching 1 1 60366000 31523000 28843000 1653 1732 1863 4275;4276 4227 4227 1 EVGGGHGCTSPPFPQEAR PCTSTLPREVGGGHGC PPFPQEARAEISERSG R E V A R A 1 1 0 0 1 1 2 4 1 0 0 0 0 1 3 1 1 0 0 1 0 0 18 0 1881.8428 A0A1B0GVD3;Q6ZN17 A0A1B0GVD3 202 219 LIN28B Protein lin-28 homolog B yes no 3 0.00054653 86.189 By matching By MS/MS 1 1 30656000 11824000 18833000 1654 428 1864 4277;4278 4228 4228 801;6956 1 EVGLLKDMSPLSETEMALGK DVAPSTVKEVGLLKDM ETEMALGKDVTPPPET K E V G K D 1 0 0 1 0 0 3 2 0 0 4 2 2 0 1 2 1 0 0 1 0 0 20 1 2147.0854 E7EVA0;P27816 E7EVA0 516 535 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 0.0025499 70.02 By MS/MS By MS/MS 3 3 41633000 21153000 20479000 1655 828 1865;1866 4279;4280;4281;4282;4283;4284 4229;4230;4231;4232;4233 4232 312;313 1532;1533 5 EVIEIEDASPTKCPITTK EREREKLREVIEIEDA TKCPITTKLVLDEDEE R E V T K L 1 0 0 1 1 0 3 0 0 3 0 2 0 0 2 1 3 0 0 1 0 0 18 1 2030.0242 P46100 P46100 1519 1536 ATRX Transcriptional regulator ATRX yes yes 2;3 0.0032578 106.58 By MS/MS By matching 2 2 87814000 48484000 39329000 1656 1837 1867 4285;4286;4287;4288 4234;4235 4234 3476;7448 2 EVIKSPTASR KEGDFVYKEVIKSPTA IKSPTASRISLGKKVK K E V S R I 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 2 1 0 0 1 0 0 10 1 1086.6033 O94885 O94885 438 447 SASH1 SAM and SH3 domain-containing protein 1 yes yes 2 0.030441 81.625 By MS/MS By matching 1 1 8635300 4753400 3881900 1657 1573 1868 4289;4290 4236 4236 0 EVLDEDTDEEKETLK VKGISSTKEVLDEDTD DEEKETLKNQLREMEL K E V L K N 0 0 0 3 0 0 5 0 0 0 2 2 0 0 0 0 2 0 0 1 0 0 15 1 1791.8262 Q9Y3P9 Q9Y3P9 990 1004 RABGAP1 Rab GTPase-activating protein 1 yes yes 2;3 6.5934E-66 207.55 By matching By MS/MS 2 2 187590000 74657000 112930000 1658 3110 1869 4291;4292;4293;4294 4237;4238 4237 7945 2 EVLYDSEGLSGEER APASSPKREVLYDSEG EGLSGEERGGKSSQKD R E V E R G 0 1 0 1 0 0 4 2 0 0 2 0 0 0 0 2 0 0 1 1 0 0 14 0 1581.7158 Q9H7N4 Q9H7N4 729 742 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.0040418 86.944 By MS/MS By MS/MS 1 3 21369000 8312800 13057000 1659 2849 1870 4295;4296;4297;4298 4239;4240;4241 4241 5994;5995;8465 3 EVMESAVGNSSGSGQNEESPR AELERKLREVMESAVG GQNEESPRKRKKATEA R E V P R K 1 1 2 0 0 1 4 3 0 0 0 0 1 0 1 5 0 0 0 2 0 0 21 0 2149.9182 Q9NVF7 Q9NVF7 326 346 FBXO28 F-box only protein 28 yes yes 2;3 0.00021203 93.255 By MS/MS By MS/MS 4 4 95068000 52209000 42858000 1660 2924 1871;1872 4299;4300;4301;4302;4303;4304;4305;4306 4242;4243;4244;4245;4246;4247 4242 1161 6177;6178 6 EVMSPTGSAR ECKKAQPKEVMSPTGS MSPTGSARGRSRVMPY K E V A R G 1 1 0 0 0 0 1 1 0 0 0 0 1 0 1 2 1 0 0 1 0 0 10 0 1033.4862 H0YHB7;O43347 H0YHB7 120 129 MSI1 RNA-binding protein Musashi homolog 1 yes no 2 0.011563 57.164 By MS/MS By MS/MS 1 2 4106200 2802900 1303300 1661 1185 1873 4307;4308;4309 4248;4249 4248 431 2225 2 EVPPPPAEESEEEDDDGLPK LCCTVIIKEVPPPPAE EDDDGLPKKKWPTVDA K E V P K K 1 0 0 3 0 0 6 1 0 0 1 1 0 0 5 1 0 0 0 1 0 0 20 0 2177.9488 Q9H6X2 Q9H6X2 353 372 ANTXR1 Anthrax toxin receptor 1 yes yes 3 0.0023783 63.337 By MS/MS By MS/MS 1 1 11523000 5595000 5927700 1662 2845 1874 4310;4311 4250;4251;4252 4250 5985 3 EVPSKEEPSPVKAEVAEK TKPSVTEKEVPSKEEP VKAEVAEKQATDVKPK K E V E K Q 2 0 0 0 0 0 5 0 0 0 0 3 0 0 3 2 0 0 0 3 0 0 18 2 1952.0102 P46821;D6RA40;D6RA32 P46821 606 623 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 3 0.023345 59.618 By MS/MS By matching 1 1 49230000 26840000 22390000 1663 1840 1875 4312;4313 4253 4253 3496 1 EVQAEQPSSSSPR KEKEKADREVQAEQPS QPSSSSPRRKTVKEKD R E V P R R 1 1 0 0 0 2 2 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 13 0 1400.6532 Q9Y388 Q9Y388 178 190 RBMX2 RNA-binding motif protein, X-linked 2 yes yes 2 1.3109E-05 125.47 By MS/MS By MS/MS 1 1 67099000 26878000 40221000 1664 3105 1876 4314;4315 4254;4255 4254 6663;6664 2 EVRSPTKAPHLQLIEGK VQDGDGRREVRSPTKA HLQLIEGKKNSLRVEG R E V G K K 1 1 0 0 0 1 2 1 1 1 2 2 0 0 2 1 1 0 0 1 0 0 17 2 1902.0687 O43491;E9PK52;E9PHY5;H0Y5B0;E9PII3 O43491 595 611 EPB41L2 Band 4.1-like protein 2 yes no 3;4 0.00092958 89.506 By MS/MS By MS/MS 1 1 49133000 20497000 28636000 1665 1502 1877 4316;4317 4256;4257;4258 4257 2806;7314 3 EVSDSEAGGGPQGER GEESDLEREVSDSEAG GGGPQGERKNRSSKKS R E V E R K 1 1 0 1 0 1 3 4 0 0 0 0 0 0 1 2 0 0 0 1 0 0 15 0 1473.6332 Q9BW71 Q9BW71 368 382 HIRIP3 HIRA-interacting protein 3 yes yes 2 0.0079528 74.392 By matching By MS/MS 1 1 37175000 20896000 16280000 1666 2760 1878 4318;4319 4259 4259 5747 1 EVSFQSTGESEWK ESDIFSIREVSFQSTG STGESEWKDTNYTLNT R E V W K D 0 0 0 0 0 1 3 1 0 0 0 1 0 1 0 3 1 1 0 1 0 0 13 0 1512.6733 Q07021;I3L3Q7;I3L3B0 Q07021 208 220 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 2 2.5645E-11 146.59 By MS/MS By MS/MS 1 1 38501000 20346000 18154000 1667 2009 1879 4320;4321 4260;4261 4260 3875 2 EVSPEVVR REEIIIKKEVSPEVVR EVSPEVVRSKLSPSPS K E V V R S 0 1 0 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 0 3 0 0 8 0 913.4869 Q5T200;A0A087WX14 Q5T200 196 203 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.02342 70.1 By matching By MS/MS 1 1 117390000 62744000 54647000 1668 2238 1880 4322;4323 4262 4262 4473 1 EVSPLLPK EEQKNTPREVSPLLPK EVSPLLPKLPEEPEAE R E V P K L 0 0 0 0 0 0 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 8 0 881.52222 Q15911 Q15911 3430 3437 ZFHX3 Zinc finger homeobox protein 3 yes yes 2 0.022143 71.296 By matching By MS/MS 1 1 5596200 3119300 2476900 1669 2160 1881 4324;4325 4263 4263 4284 1 EVSPPGAR SPSIKRKREVSPPGAR EVSPPGARTRGQQRVE R E V A R T 1 1 0 0 0 0 1 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 8 0 811.41882 H0Y9Y2;Q8NFC6 Q8NFC6 3027 3034 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 no no 2 0.0262 66.962 By MS/MS By matching 1 1 40139000 20733000 19406000 1670 2517;1155 1882 4326;4327 4264 4264 2190 1 EVSPSDVR HVRRVRGREVSPSDVR EVSPSDVREDSNLESS R E V V R E 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 2 0 0 0 2 0 0 8 0 887.43486 Q8WYP5 Q8WYP5 1942 1949 AHCTF1 Protein ELYS yes yes 2 0.0092753 96.665 By MS/MS By matching 1 1 54664000 30267000 24397000 1671 2575 1883 4328;4329 4265 4265 5277 1 EVSSLEGSPPPCLGQEEAVCTK VPIIDGAKEVSSLEGS QEEAVCTKIQVQSSEA K E V T K I 1 0 0 0 2 1 4 2 0 0 2 1 0 0 3 3 1 0 0 2 0 0 22 0 2373.0828 Q02952 Q02952 1388 1409 AKAP12 A-kinase anchor protein 12 yes yes 2;3 0.00024388 77.838 By MS/MS By MS/MS 2 2 69117000 37194000 31923000 1672 1991 1884 4330;4331;4332;4333 4266;4267;4268;4269 4266 3824;3825;3826 4 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR TSDDTDVREVSSRPST PNKIEDLRSECSSDFG R E V L R S 1 2 1 2 0 0 3 2 0 3 2 1 0 0 3 7 2 0 0 3 0 0 32 2 3339.7158 H0Y7I9;C9IZ08;Q14C86;H0Y4E7;F8W9S7 H0Y7I9 618 649 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 3;4 5.9179E-13 123.76 By MS/MS By MS/MS 4 4 352020000 155330000 196690000 1673 617 1885;1886 4334;4335;4336;4337;4338;4339;4340;4341 4270;4271;4272;4273;4274;4275;4276;4277 4274 1129;1130;1131;1132;7007 8 EVTPILAQTQSSGPQTSTTPQVLSPTITSPPNALPR FSQSGNSREVTPILAQ SPPNALPRRSSRLFTS R E V P R R 2 1 1 0 0 4 1 1 0 2 3 0 0 0 7 5 7 0 0 2 0 0 36 0 3713.9476 G5EA36;P30260 G5EA36 341 376 CDC27 Cell division cycle protein 27 homolog yes no 3;4 7.8646E-14 89.285 By MS/MS By MS/MS 2 2 281700000 159190000 122500000 1674 1106 1887 4342;4343;4344;4345 4278;4279;4280;4281;4282;4283 4283 2087 6 EVTTVLQADSAEYAQPLVGGIVGTLHQR EVNHLSPREVTTVLQA IVGTLHQRSTFKPEEG R E V Q R S 3 1 0 1 0 3 2 3 1 1 3 0 0 0 1 1 3 0 1 4 0 0 28 0 2951.5352 Q96PD2 Q96PD2 609 636 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 yes yes 3 0.015076 45.323 By MS/MS 1 6687300 0 6687300 1675 2693 1888 4346 4284 4284 8431 1 EVVEEAENGR TKDLKEKKEVVEEAEN VEEAENGRDAPANGNA K E V G R D 1 1 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 10 0 1130.5204 B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1;P06454 B8ZZQ6 22 31 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 2 0.011248 78.149 By MS/MS By MS/MS 2 2 19857000 10103000 9754600 1676 605 1889 4347;4348;4349;4350 4285;4286 4285 2 EVVKPVPITSPAVSK PVQKGEPKEVVKPVPI ITSPAVSKVTSTNNMA K E V S K V 1 0 0 0 0 0 1 0 0 1 0 2 0 0 3 2 1 0 0 4 0 0 15 1 1549.9079 Q96HC4;A0A0D9SFR4 Q96HC4 102 116 PDLIM5 PDZ and LIM domain protein 5 yes no 2;3 0.0009038 98.552 By MS/MS By MS/MS 2 3 21891000 13154000 8737100 1677 2662 1890 4351;4352;4353;4354;4355 4287;4288;4289;4290 4288 5489;5490;7792 4 EVYELLDSPGK KLYEGKTKEVYELLDS ELLDSPGKVLLQSKDQ K E V G K V 0 0 0 1 0 0 2 1 0 0 2 1 0 0 1 1 0 0 1 1 0 0 11 0 1248.6238 E9PBS1;P22234 E9PBS1 20 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 6.3829E-21 179.67 By MS/MS By MS/MS 2 2 108250000 54130000 54120000 1678 845 1891;1892 4356;4357;4358;4359 4291;4292;4293;4294 4293 1574 4 EVYELLDSPGKVLLQSK KLYEGKTKEVYELLDS GKVLLQSKDQITAGNA K E V S K D 0 0 0 1 0 1 2 1 0 0 4 2 0 0 1 2 0 0 1 2 0 0 17 1 1917.0459 E9PBS1;P22234 E9PBS1 20 36 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2;3 1.3797E-31 167.95 By MS/MS By MS/MS 2 2 217460000 112010000 105450000 1679 845 1893 4360;4361;4362;4363 4295;4296 4296 1574 2 EVYMTPLR QNEDEKNKEVYMTPLR EVYMTPLRGVKATQAS K E V L R G 0 1 0 0 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 1 0 0 8 0 1007.511 Q9BPX3 Q9BPX3 927 934 NCAPG Condensin complex subunit 3 yes yes 2 0.0051249 79.451 By MS/MS By MS/MS 2 2 50093000 29356000 20737000 1680 2739 1894;1895 4364;4365;4366;4367 4297;4298;4299 4298 1087 8446 3 EWNGVVSESDSPVK PPPKAALKEWNGVVSE SESDSPVKRPGRKAAR K E W V K R 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 3 0 1 0 3 0 0 14 0 1531.7155 M0R0Q7;P18858;B4E135;M0QY71;M0R1G7;F5GZ28 M0R0Q7 41 54 LIG1 DNA ligase;DNA ligase 1 yes no 2 0.0014853 106.3 By MS/MS By MS/MS 2 2 60189000 31278000 28911000 1681 1420 1896;1897 4368;4369;4370;4371 4300;4301 4300 57 2603;2604 2 EWNGVVSESDSPVKRPGR PPPKAALKEWNGVVSE SPVKRPGRKAARVLGS K E W G R K 0 2 1 1 0 0 2 2 0 0 0 1 0 0 2 3 0 1 0 3 0 0 18 2 1997.9919 M0R0Q7;P18858;B4E135;M0QY71;M0R1G7;F5GZ28 M0R0Q7 41 58 LIG1 DNA ligase;DNA ligase 1 yes no 3 0.01372 54.281 By MS/MS 1 20138000 20138000 0 1682 1420 1898 4372 4302 4302 57 2603;2604 1 EWSLESSPAQNWTPPQPR VVALAEGREWSLESSP NWTPPQPRTLPSMVHR R E W P R T 1 1 1 0 0 2 2 0 0 0 1 0 0 0 4 3 1 2 0 0 0 0 18 0 2108.9916 F8VWH9;Q8N6T3;E5RHT6;E5RHC5;F8W1U7 F8VWH9 49 66 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes no 2;3 1.2864E-06 132.17 By matching By MS/MS 2 2 31050000 15354000 15696000 1683 1019 1899 4373;4374;4375;4376 4303;4304 4303 1906;7154 2 EYAENIGDGRSPEFR KIVRHIIKEYAENIGD DGRSPEFRENEQKRIL K E Y F R E 1 2 1 1 0 0 3 2 0 1 0 0 0 1 1 1 0 0 1 0 0 0 15 1 1738.7911 A0A087WUB9;Q8WYA6 A0A087WUB9 540 554 CTNNBL1 Beta-catenin-like protein 1 yes no 2;3 1.1801E-15 150.12 By MS/MS By MS/MS 2 2 61970000 34470000 27500000 1684 53 1900 4377;4378;4379;4380 4305;4306;4307;4308 4306 93 4 EYCLSPR IRFDQLHREYCLSPRN REYCLSPRNQPRRMCL R E Y P R N 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 0 7 0 923.4171 C9JWC4;Q8NCD3 C9JWC4 359 365 HJURP Holliday junction recognition protein yes no 2 0.030951 72.243 By MS/MS By matching 1 1 13725000 7388000 6336800 1685 697 1901 4381;4382 4309 4309 1 EYEEDDILASDDPSSIEQYENTR IVQESWRKEYEEDDIL IEQYENTRTYELQSKK K E Y T R T 1 1 1 4 0 1 5 0 0 2 1 0 0 0 1 3 1 0 2 0 0 0 23 0 2717.1464 Q96RS0 Q96RS0 145 167 TGS1 Trimethylguanosine synthase yes yes 2;3 2.2557E-05 91.964 By MS/MS By MS/MS 1 1 23979000 9977900 14001000 1686 2704 1902 4383;4384 4310;4311 4311 5579 2 EYEMKRMAENELSR VSNAEKRKEYEMKRMA MAENELSRSVNEFLSK K E Y S R S 1 2 1 0 0 0 4 0 0 0 1 1 2 0 0 1 0 0 1 0 0 0 14 2 1784.8186 H0YHG0;Q6Y2X3 H0YHG0 132 145 DNAJC14 DnaJ homolog subfamily C member 14 yes no 2 0.028399 47.532 By MS/MS 1 0 0 0 1687 1186 1903 4385 4312 4312 432 2226 1 EYFDDSTEER EEFCEEEKEYFDDSTE FDDSTEERFYKQSSMS K E Y E R F 0 1 0 2 0 0 3 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 10 0 1289.5048 Q8NEF9 Q8NEF9 259 268 SRFBP1 Serum response factor-binding protein 1 yes yes 2 0.0031546 94.402 By MS/MS By MS/MS 1 1 95378000 46877000 48502000 1688 2514 1904 4386;4387 4313;4314 4314 5134 2 EYFGGFGEVESIELPMDNK DTPEEKIREYFGGFGE IELPMDNKTNK_____ R E Y N K T 0 0 1 1 0 0 4 3 0 1 1 1 1 2 1 1 0 0 1 1 0 0 19 0 2159.9721 D6RAF8;Q14103;H0YA96;H0Y8G5 D6RAF8 200 218 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.028097 63.29 By MS/MS 1 10016000 0 10016000 1689 741 1905 4388 4315 4315 283 1 EYFTFPASK IPTQTYTREYFTFPAS YFTFPASKSQDRMAPP R E Y S K S 1 0 0 0 0 0 1 0 0 0 0 1 0 2 1 1 1 0 1 0 0 0 9 0 1088.5179 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1188 1196 MLLT4 Afadin yes no 2 0.00099637 117.81 By MS/MS By MS/MS 2 2 160050000 81940000 78110000 1690 494 1906 4389;4390;4391;4392 4316;4317;4318;4319;4320;4321;4322 4321 899;6965;8057 7 EYFTFPASKSQDR IPTQTYTREYFTFPAS PASKSQDRMAPPQNQW R E Y D R M 1 1 0 1 0 1 1 0 0 0 0 1 0 2 1 2 1 0 1 0 0 0 13 1 1574.7365 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1188 1200 MLLT4 Afadin yes no 2;3 0.0094868 68.972 By MS/MS By MS/MS 2 1 13609000 8531300 5077500 1691 494 1907;1908 4393;4394;4395 4323;4324;4325 4324 899;900;6965;8057 3 EYGEDGNGKIMPASTFDMDK CIHMFENKEYGEDGNG ASTFDMDKLKSTLKQF K E Y D K L 1 0 1 3 0 0 2 3 0 1 0 2 2 1 1 1 1 0 1 0 0 0 20 1 2203.9402 Q5T8V1;Q8N4J0 Q5T8V1 77 96 C9orf41 UPF0586 protein C9orf41 yes no 2 0.031477 40.179 By MS/MS 1 0 0 0 1692 2248 1909 4396 4326 4326 898 1 EYIPGQPPLSQSSDSSPTR QYKEKTGKEYIPGQPP SSDSSPTRNSEPAGLE K E Y T R N 0 1 0 1 0 2 1 1 0 1 1 0 0 0 4 5 1 0 1 0 0 0 19 0 2044.9702 V9GYZ6;P07814 V9GYZ6 878 896 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2;3 2.158E-32 164.2 By MS/MS By MS/MS 5 5 1881300000 942740000 938520000 1693 1655 1910;1911 4397;4398;4399;4400;4401;4402;4403;4404;4405;4406 4327;4328;4329;4330;4331;4332;4333;4334;4335;4336;4337;4338;4339;4340;4341;4342 4335 3117;3118;3119;3120;3121 16 EYQDLLNVK EEMARHLREYQDLLNV YQDLLNVKMALDIEIA R E Y V K M 0 0 1 1 0 1 1 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 9 0 1120.5764 P08670;B0YJC4;B0YJC5;P17661;P07196;P12036;E7ESP9;P07197;E7EMV2 P08670 382 390 VIM;DES;NEFL;NEFH;NEFM Vimentin;Desmin;Neurofilament light polypeptide;Neurofilament heavy polypeptide;Neurofilament medium polypeptide no no 2 2.1073E-16 180.93 By MS/MS By MS/MS 1 1 26356000 11405000 14951000 1694 1663;817 1912 4407;4408 4343;4344 4344 2 EYQPHVIVSTTGPNPFTTLTDR ASKAIIEKEYQPHVIV PFTTLTDRELEEYRRE K E Y D R E 0 1 1 1 0 1 1 1 1 1 1 0 0 1 3 1 5 0 1 2 0 0 22 0 2472.2285 P35611;E7EV99;E7ENY0;H0Y9H2 P35611 549 570 ADD1 Alpha-adducin yes no 3 0.00052087 73.675 By MS/MS By MS/MS 1 1 18109000 9715900 8393100 1695 1799 1913 4409;4410 4345;4346 4346 8258 1 EYSPPYAPSHQQYPPSHATPLPK EKGHRKYREYSPPYAP SHATPLPKKAYSKMDS R E Y P K K 2 0 0 0 0 2 1 0 2 0 1 1 0 0 7 3 1 0 3 0 0 0 23 0 2591.2445 Q9UPT8 Q9UPT8 157 179 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 3 0.00017401 77.66 By matching By MS/MS 3 3 73015000 36473000 36541000 1696 3068 1914 4411;4412;4413;4414;4415;4416 4347;4348;4349 4347 6487 2 EYVDCLTDKSAK EDLEEKLKEYVDCLTD CLTDKSAKTRQGALES K E Y A K T 1 0 0 2 1 0 1 0 0 0 1 2 0 0 0 1 1 0 1 1 0 0 12 1 1427.6602 A0A0R4J2F6;Q12894 A0A0R4J2F6 79 90 IFRD2 Interferon-related developmental regulator 2 yes no 2 0.019308 56.632 By matching By MS/MS 1 1 30252000 18203000 12049000 1697 376 1915 4417;4418 4350;4351 4350 8037 2 EYVSNDAAQSDDEEK LHIMRRTKEYVSNDAA AQSDDEEKLQSQPTDT K E Y E K L 2 0 1 3 0 1 3 0 0 0 0 1 0 0 0 2 0 0 1 1 0 0 15 0 1698.6857 Q5JSH3;H7BY83 Q5JSH3 394 408 WDR44 WD repeat-containing protein 44 yes no 2 0.0016956 88.951 By MS/MS By MS/MS 1 1 16870000 7536100 9333700 1698 2219 1916 4419;4420 4352;4353 4352 4434 2 EYVSNDAAQSDDEEKLQSQPTDTDGGR LHIMRRTKEYVSNDAA PTDTDGGRLKQKTTQL K E Y G R L 2 1 1 5 0 3 3 2 0 0 1 1 0 0 1 3 2 0 1 1 0 0 27 1 2954.265 Q5JSH3;H7BY83 Q5JSH3 394 420 WDR44 WD repeat-containing protein 44 yes no 3 0.0001717 72.158 By MS/MS By MS/MS 1 1 302750000 133860000 168880000 1699 2219 1917 4421;4422 4354;4355 4355 4434 2 EYVSQVSWGK LSKADRWREYVSQVSW VSQVSWGKLKRRVKGW R E Y G K L 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 2 0 1 1 2 0 0 10 0 1181.5717 Q9H0W5 Q9H0W5 196 205 CCDC8 Coiled-coil domain-containing protein 8 yes yes 2 0.00041718 114.76 By MS/MS By MS/MS 1 1 12680000 6148800 6531200 1700 2807 1918 4423;4424 4356;4357 4356 5871 2 FADLSEAANR AEEWYKSKFADLSEAA DLSEAANRNNDALRQA K F A N R N 3 1 1 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1092.52 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 295 304 VIM Vimentin yes no 2 0.0014775 132.76 By MS/MS By MS/MS 1 1 52801000 21391000 31411000 1701 1663 1919 4425;4426 4358;4359 4359 2 FADQDDIGNVSFDR QFGFNDEKFADQDDIG IGNVSFDRVSDINFTL K F A D R V 1 1 1 4 0 1 0 1 0 1 0 0 0 2 0 1 0 0 0 1 0 0 14 0 1597.7009 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 276 289 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 2 1.4466E-20 156.67 By matching By MS/MS 1 1 39774000 22282000 17492000 1702 896 1920 4427;4428 4360 4360 1675 1 FAEAFEAIPR LEQYAIKKFAEAFEAI EAFEAIPRALAENSGV K F A P R A 3 1 0 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 10 0 1149.5819 P50990 P50990 441 450 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0067851 92.838 By matching By MS/MS 1 1 7166700 4219600 2947100 1703 1871 1921 4429;4430 4361 4361 1 FAEDEEKSENSSEDGDITDK KRRGKRVRFAEDEEKS EDGDITDKSLCGSGEK R F A D K S 1 0 1 4 0 0 5 1 0 1 0 2 0 1 0 3 1 0 0 0 0 0 20 1 2243.919 Q5C9Z4 Q5C9Z4 310 329 NOM1 Nucleolar MIF4G domain-containing protein 1 yes yes 2 0.00442 81.878 By MS/MS 1 0 0 0 1704 2211 1922 4431 4362 4362 4423;4424;4425 1 FAELPEFRPEEVLPSPTLQSLATSPR SEVDFEERFAELPEFR QSLATSPRAILGSYRK R F A P R A 2 2 0 0 0 1 4 0 0 0 4 0 0 2 5 3 2 0 0 1 0 0 26 1 2910.5127 A0A0A0MQR4;I3L2J0;Q96RK0;I3L373;I3L135;I3L1Q4 A0A0A0MQR4 1357 1382 CIC Protein capicua homolog yes no 3 0.00048759 68.192 By MS/MS By MS/MS 1 1 64270000 29062000 35208000 1705 186 1923 4432;4433 4363;4364;4365 4365 326;327;328 3 FAMEPEEFDSDTLR ILDESGKKFAMEPEEF EFDSDTLREFVTAFKK K F A L R E 1 1 0 2 0 0 3 0 0 0 1 0 1 2 1 1 1 0 0 0 0 0 14 0 1685.7243 P13667 P13667 486 499 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.005844 81.525 By MS/MS 1 0 0 0 1706 1694 1924 4434 4366 4366 632 1 FANLTPSR SEENFDGKFANLTPSR FANLTPSRTVPDSEAP K F A S R T 1 1 1 0 0 0 0 0 0 0 1 0 0 1 1 1 1 0 0 0 0 0 8 0 904.47667 F1T0I1;J3KNL6;O15027;X6RGP5;A0A0C4DH09 F1T0I1 2050 2057 SEC16A Protein transport protein Sec16A yes no 2 0.012628 80.916 By MS/MS By matching 1 1 7190600 3380500 3810100 1707 930 1925 4435;4436 4367 4367 1733 1 FAQSAPGSPLSSQPVLITVQR LAVIQEARFAQSAPGS PVLITVQRQLPQAIKP R F A Q R Q 2 1 0 0 0 3 0 1 0 1 2 0 0 1 3 4 1 0 0 2 0 0 21 0 2182.1746 Q01167 Q01167 421 441 FOXK2 Forkhead box protein K2 yes yes 2;3 1.1925E-05 122.3 By MS/MS By MS/MS 2 2 227650000 118250000 109410000 1708 1979 1926 4437;4438;4439;4440 4368;4369;4370;4371 4370 3797 4 FASDDEHDEHDENGATGPVK QFQGKKTKFASDDEHD NGATGPVKRAREETDK K F A V K R 2 0 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 20 0 2168.8883 P05455 P05455 364 383 SSB Lupus La protein yes yes 2;3 0.00023013 90.06 By MS/MS By MS/MS 4 4 874840000 436190000 438650000 1709 1643 1927;1928 4441;4442;4443;4444;4445;4446;4447;4448 4372;4373;4374;4375;4376;4377;4378 4377 67 3102 7 FASDDEHDEHDENGATGPVKR QFQGKKTKFASDDEHD GATGPVKRAREETDKE K F A K R A 2 1 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 21 1 2324.9894 P05455 P05455 364 384 SSB Lupus La protein yes yes 3;4 2.4291E-08 133.41 By MS/MS By MS/MS 6 6 1996000000 1089400000 906540000 1710 1643 1929;1930 4449;4450;4451;4452;4453;4454;4455;4456;4457;4458;4459;4460 4379;4380;4381;4382;4383;4384;4385;4386 4384 67 3102 8 FASENDLPEWK KMRAKLFRFASENDLP ENDLPEWKERGTGDVK R F A W K E 1 0 1 1 0 0 2 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 11 0 1334.6143 C9JJ34;P43487;C9JDM3;F6WQW2;C9JIC6;C9JXG8;C9JGV6 C9JJ34 58 68 RANBP1 Ran-specific GTPase-activating protein yes no 2 9.6992E-21 178.67 By MS/MS By MS/MS 3 3 347040000 186700000 160350000 1711 668 1931;1932;1933 4461;4462;4463;4464;4465;4466 4387;4388;4389;4390;4391;4392;4393;4394;4395 4390 23 1238 9 FASSSSVQQVTFSR KLRKAPVKFASSSSVQ VQQVTFSRGTDGQPLL K F A S R G 1 1 0 0 0 2 0 0 0 0 0 0 0 2 0 5 1 0 0 2 0 0 14 0 1529.7474 A0A087WV20;A0A087WTU9;A0A087WZY3;Q8TCU4 A0A087WV20 3244 3257 ALMS1 Alstrom syndrome protein 1 yes no 2 0.023096 51.939 By matching By MS/MS 1 1 8596800 4856800 3740000 1712 45 1934 4467;4468 4396 4396 85 0 FAVPTYAAK ________________ AVPTYAAKQPQQFPSR R F A A K Q 3 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 1 1 0 0 9 0 966.51747 A0A0J9YY58;Q13443 A0A0J9YY58 7 15 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes no 2 0.011474 98.048 By MS/MS By MS/MS 1 1 45953000 24913000 21040000 1713 373 1935 4469;4470 4397;4398 4397 6940 2 FCDSPTSDLEMR RHDWAPPRFCDSPTSD PTSDLEMRNGRGRGKR R F C M R N 0 1 0 2 1 0 1 0 0 0 1 0 1 1 1 2 1 0 0 0 0 0 12 0 1456.5963 O15014 O15014 355 366 ZNF609 Zinc finger protein 609 yes yes 2 0.00077178 86.699 By MS/MS By MS/MS 2 2 22170000 9992200 12178000 1714 1466 1936;1937 4471;4472;4473;4474 4399;4400;4401 4399 529 2730 3 FCLSSPTEALK HSVNPEDRFCLSSPTE SSPTEALKMGYTDCKN R F C L K M 1 0 0 0 1 0 1 0 0 0 2 1 0 1 1 2 1 0 0 0 0 0 11 0 1251.6169 E7EWD6;Q76L83 E7EWD6 1122 1132 ASXL2 Putative Polycomb group protein ASXL2 yes no 2 0.0013603 103.91 By MS/MS By matching 1 1 12500000 6054700 6445400 1715 834 1938 4475;4476 4402 4402 1556 1 FCTGLTQIETLFK NMKEVFTRFCTGLTQI TQIETLFKSKDYEFMW R F C F K S 0 0 0 0 1 1 1 1 0 1 2 1 0 2 0 0 3 0 0 0 0 0 13 0 1556.7909 P12277 P12277 253 265 CKB Creatine kinase B-type yes yes 2 0.00015591 123.67 By MS/MS By matching 1 1 12920000 8715200 4205100 1716 1687 1939 4477;4478 4403 4403 1 FDDAVVQSDMK AKRLIGRRFDDAVVQS AVVQSDMKHWPFMVVN R F D M K H 1 0 0 3 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 0 11 0 1253.5598 P11142;E9PKE3;E9PN89;E9PNE6;E9PLF4;E9PQQ4;E9PQK7;E9PPY6;E9PN25;E9PK54 P11142 78 88 HSPA8 Heat shock cognate 71 kDa protein no no 2 0.0050741 97.456 By MS/MS By MS/MS 2 2 11902000 5045900 6855700 1717 1680;894 1940;1941 4479;4480;4481;4482 4404;4405;4406 4406 334 2 FDDMSSPGLELPSCELSR VDESEEERFDDMSSPG LPSCELSRLEEIAELV R F D S R L 0 1 0 2 1 0 2 1 0 0 3 0 1 1 2 4 0 0 0 0 0 0 18 0 2038.8976 Q6IN85;G3V231;H0YIY8;G3V5Z3 Q6IN85 122 139 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes no 2 0.00041098 89.913 By MS/MS By MS/MS 2 2 67674000 36631000 31043000 1718 2303 1942;1943 4483;4484;4485;4486 4407;4408;4409;4410 4408 923 4637;4638 4 FDDSDTEQIAEEGDDNLAK PSWFKDIKFDDSDTEQ EGDDNLAKYLISDTGG K F D A K Y 2 0 1 5 0 1 3 1 0 1 1 1 0 1 0 1 1 0 0 0 0 0 19 0 2110.8815 E9PDH4 E9PDH4 472 490 PIKFYVE yes yes 2 0.024027 58.024 By MS/MS 1 3605100 0 3605100 1719 853 1944 4487 4411 4411 1584 1 FDECVLDK HCRKQQAKFDECVLDK FDECVLDKLGWVRPDL K F D D K L 0 0 0 2 1 0 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 8 0 1024.4535 P51970 P51970 107 114 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 2 1.0441E-07 113.71 By MS/MS By matching 1 1 5161800 2605000 2556800 1720 1882 1945 4488;4489 4412 4412 0 FDIYDPFHPTDEAYSPPPAPEQK PPAPPAPRFDIYDPFH PPPAPEQKYDPFEPTG R F D Q K Y 2 0 0 3 0 1 2 0 1 1 0 1 0 2 6 1 1 0 2 0 0 0 23 0 2660.2071 Q9H7N4 Q9H7N4 225 247 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 3 7.6945E-05 82.189 By MS/MS By MS/MS 1 1 219360000 119810000 99552000 1721 2849 1946 4490;4491 4413;4414 4414 5996 2 FDLMYAK AWARLDHKFDLMYAKR KFDLMYAKRAFVHWYV K F D A K R 1 0 0 1 0 0 0 0 0 0 1 1 1 1 0 0 0 0 1 0 0 0 7 0 886.42588 F5H5D3;Q9BQE3;C9J2C0;Q9NY65;V9GZ17;A6NHL2;P68363;P68366;Q71U36;Q6PEY2;Q13748 P68363 465 471 TUBA1C;TUBA8;TUBAL3;TUBA1B;TUBA4A;TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain no no 2 0.0073905 72.138 By MS/MS 1 0 0 0 1722 976;1957;2360 1947 4492 4415 4415 357 8136 1 FDQLFDDESDPFEVLK FGCVVTNRFDQLFDDE SDPFEVLKAAENKKKE R F D L K A 0 0 0 4 0 1 2 0 0 0 2 1 0 3 1 1 0 0 0 1 0 0 16 0 1942.8836 Q8NC51 Q8NC51 17 32 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.00095494 93.754 By MS/MS By matching 2 1 60875000 48235000 12640000 1723 2498 1948;1949 4493;4494;4495 4416;4417 4417 5096 2 FDSNEEDSASVFSPSFGLK KSEDDSAKFDSNEEDS FSPSFGLKQTDKVPSK K F D L K Q 1 0 1 2 0 0 2 1 0 0 1 1 0 3 1 5 0 0 0 1 0 0 19 0 2061.9167 Q02880 Q02880 1464 1482 TOP2B DNA topoisomerase 2-beta yes yes 2 1.0124E-10 141.7 By matching By MS/MS 1 1 14722000 9124100 5597700 1724 1989 1950 4496;4497 4418;4419 4419 3815;3816 2 FDSSLLSSDDETK ELCPYESKFDSSLLSS LSSDDETKCKPNSASE K F D T K C 0 0 0 3 0 0 1 0 0 0 2 1 0 1 0 4 1 0 0 0 0 0 13 0 1442.6413 R4GMW8;P28715 R4GMW8 982 994 BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells yes no 2 9.962E-07 129.17 By matching By MS/MS 1 1 13054000 7455200 5599200 1725 3158 1951 4498;4499 4420 4420 6754;6755 1 FDTGNLCMVTGGANLGR GKITDFIKFDTGNLCM TGGANLGRIGVITNRE K F D G R I 1 1 2 1 1 0 0 4 0 0 2 0 1 1 0 0 2 0 0 1 0 0 17 0 1781.8189 P62701 P62701 175 191 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 0.0038628 86.803 By MS/MS 1 2656000 2656000 0 1726 1943 1952 4500 4421 4421 1 FDWGPAPPTTFKPNSPDLAK LEEQSIGRFDWGPAPP PNSPDLAKHYKSASPQ R F D A K H 2 0 1 2 0 0 0 1 0 0 1 2 0 2 5 1 2 1 0 0 0 0 20 1 2185.0844 Q5VT82;B7ZM79;Q9HC56 Q5VT82 918 937 PCDH9 Protocadherin-9 yes no 3 0.00083975 74.812 By matching By MS/MS 1 1 21410000 13042000 8367800 1727 601 1953 4501;4502 4422;4423 4422 1092 2 FEDENFILK GKSIYGEKFEDENFIL EDENFILKHTGPGILS K F E L K H 0 0 1 1 0 0 2 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1153.5655 P62937;F8WE65;C9J5S7 P62937 83 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 2 1.5496E-44 205.36 By MS/MS By MS/MS 1 1 17404000 8550400 8853600 1728 1950 1954 4503;4504 4424;4425 4425 2 FEEESKEPVADEEEEDSDDDVEPITEFR LYVMVNAKFEEESKEP VEPITEFRFVPSDKSA K F E F R F 1 1 0 5 0 0 10 0 0 1 0 1 0 2 2 2 1 0 0 2 0 0 28 1 3313.3794 E9PJF4;P54105 E9PJF4 86 113 CLNS1A Methylosome subunit pICln yes no 3;4 2.2108E-57 173.93 By MS/MS By MS/MS 2 3 6782000000 3677300000 3104600000 1729 890 1955 4505;4506;4507;4508;4509 4426;4427;4428;4429;4430;4431;4432;4433;4434 4431 1667;1668 9 FEELNADLFR YTSITRARFEELNADL ELNADLFRGTLDPVEK R F E F R G 1 1 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 10 0 1252.6088 P11142;E9PKE3;E9PN89;E9PNE6;P54652;A8K7Q2 P11142 302 311 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 0.0001595 149.72 By MS/MS By MS/MS 1 1 12601000 5691500 6909800 1730 1680 1956 4510;4511 4435;4436 4436 2 FEELTNLIR VRSAKDKRFEELTNLI EELTNLIRTIRNAMKI R F E I R T 0 1 1 0 0 0 2 0 0 1 2 0 0 1 0 0 1 0 0 0 0 0 9 0 1133.6081 Q99613;B5ME19;H3BPE4 Q99613 57 65 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.012811 105.14 By MS/MS 1 0 0 0 1731 583 1957 4512 4437 4437 1 FEEVEEEPEVIPGPPSESPGMLTK VKKRRIPRFEEVEEEP ESPGMLTKLQIKQMME R F E T K L 0 0 0 0 0 0 7 2 0 1 1 1 1 1 5 2 1 0 0 2 0 0 24 0 2626.236 O43395 O43395 116 139 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 2;3 1.9059E-06 95.57 By MS/MS By MS/MS 2 1 35415000 23171000 12244000 1732 1498 1958 4513;4514;4515 4438;4439;4440 4438 537 2795;2796 2 FEGTTSLGEVR QAAIASQRFEGTTSLG TTSLGEVRTPSQLSDN R F E V R T 0 1 0 0 0 0 2 2 0 0 1 0 0 1 0 1 2 0 0 1 0 0 11 0 1194.5881 Q4G0F5 Q4G0F5 314 324 VPS26B Vacuolar protein sorting-associated protein 26B yes yes 2 8.1639E-05 120.87 By MS/MS By MS/MS 1 1 14031000 7123200 6908300 1733 2193 1959 4516;4517 4441;4442 4442 4367 2 FEKKFQSEK VSVEDLLKFEKKFQSE EKKFQSEKAAGSVSKS K F E E K A 0 0 0 0 0 1 2 0 0 0 0 3 0 2 0 1 0 0 0 0 0 0 9 2 1169.6081 Q9Y3D6 Q9Y3D6 17 25 FIS1 Mitochondrial fission 1 protein yes yes 1 0.021322 45.335 By MS/MS 1 4473700 0 4473700 1734 3106 1960 4518 4443 4443 6665 0 FEPESPGFESR EFEPQSPRFEPESPGF ESPGFESRSPGLVPPS R F E S R S 0 1 0 0 0 0 3 1 0 0 0 0 0 2 2 2 0 0 0 0 0 0 11 0 1280.5673 Q9H5H4;H3BS42 Q9H5H4 79 89 ZNF768 Zinc finger protein 768 yes no 2 0.002122 91.202 By MS/MS By MS/MS 1 1 280650000 131890000 148750000 1735 2838 1961 4519;4520 4444;4445;4446;4447 4447 5961 4 FERPMDYYEDLK NNVENLNRFERPMDYY MDYYEDLKMGMKFVSD R F E L K M 0 1 0 2 0 0 2 0 0 0 1 1 1 1 1 0 0 0 2 0 0 0 12 1 1604.7181 Q9NQS3 Q9NQS3 504 515 PVRL3 Nectin-3 yes yes 2;3 0.00053495 92.781 By MS/MS By MS/MS 2 2 27635000 15603000 12032000 1736 2897 1962 4521;4522;4523;4524 4448;4449;4450;4451 4449 1144 8469;8470 4 FESPATGILSPR MYGPPALRFESPATGI ATGILSPRGDDYFNYN R F E P R G 1 1 0 0 0 0 1 1 0 1 1 0 0 1 2 2 1 0 0 0 0 0 12 0 1273.6667 P49792 P49792 946 957 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 1.6861E-06 128.85 By MS/MS By MS/MS 1 1 45813000 27026000 18788000 1737 1860 1963 4525;4526 4452;4453;4454 4453 3602 3 FESPESQASAEQPEM QRTNFHQRFESPESQA ASAEQPEM________ R F E E M - 2 0 0 0 0 2 4 0 0 0 0 0 1 1 2 3 0 0 0 0 0 0 15 0 1665.6828 O75436 O75436 313 327 VPS26A Vacuolar protein sorting-associated protein 26A yes yes 2 0.0050689 66.674 By MS/MS 1 16140000 0 16140000 1738 1546 1964 4527 4455 4455 558 2921 1 FESPEVAER SKGCGVVKFESPEVAE ESPEVAERACRMMNGM K F E E R A 1 1 0 0 0 0 3 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1062.4982 A0A087X0X3;P52272 A0A087X0X3 699 707 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.0041791 90.913 By MS/MS By MS/MS 1 1 11312000 6182700 5129200 1739 163 1965 4528;4529 4456;4457 4456 265 2 FFCSSDSTDCVSNK VVPGTRSRFFCSSDST STDCVSNKVSIQPLDE R F F N K V 0 0 1 2 2 0 0 0 0 0 0 1 0 2 0 4 1 0 0 1 0 0 14 0 1652.6447 Q9UQ84 Q9UQ84 506 519 EXO1 Exonuclease 1 yes yes 2 0.00082287 101.61 By MS/MS By MS/MS 1 1 14647000 7822900 6824000 1740 3076 1966 4530;4531 4458;4459;4460 4459 6609 3 FFEAQIPKTPVWVR NFCYQASKFFEAQIPK PKTPVWVREEERHPDF K F F V R E 1 1 0 0 0 1 1 0 0 1 0 1 0 2 2 0 1 1 0 2 0 0 14 1 1716.9352 Q8IXW5 Q8IXW5 146 159 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 yes yes 3 0.0036935 75.911 By MS/MS By MS/MS 1 1 7348000 4630600 2717400 1741 2436 1967 4532;4533 4461;4462;4463 4461 7710 3 FFSIFYLAINAGSLLSTIITPMLR GQEKQRNRFFSIFYLA TIITPMLRVQQCGIHS R F F L R V 2 1 1 0 0 0 0 1 0 4 4 0 1 3 1 3 2 0 1 0 0 0 24 0 2687.4761 P46059 P46059 162 185 SLC15A1 Solute carrier family 15 member 1 yes yes 2 0.031084 44.44 By MS/MS 1 0 0 0 1742 1834 1968 4534 4464 4464 699 1 FFTTPSK TPKKPEAKFFTTPSKS KFFTTPSKSVRKASHT K F F S K S 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 1 2 0 0 0 0 0 7 0 826.4225 O76021 O76021 462 468 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 2 0.016155 126.24 By matching By MS/MS 1 1 26927000 13963000 12964000 1743 1562 1969 4535;4536 4465 4465 1 FFVGGNWK SAMAPSRKFFVGGNWK FFVGGNWKMNGRKQSL K F F W K M 0 0 1 0 0 0 0 2 0 0 0 1 0 2 0 0 0 1 0 1 0 0 8 0 953.47594 P60174 P60174 44 51 TPI1 Triosephosphate isomerase yes yes 2 0.022876 89.673 By MS/MS By matching 1 1 6881900 4364800 2517200 1744 1926 1970 4537;4538 4466 4466 1 FGESEEVEMEVESDEEDDKQEK LIQERYEKFGESEEVE EEDDKQEKAEEPPSQL K F G E K A 0 0 0 3 0 1 9 1 0 0 0 2 1 1 0 2 0 0 0 2 0 0 22 1 2616.0545 Q15459;H7C1L2 Q15459 317 338 SF3A1 Splicing factor 3A subunit 1 yes no 2;3 6.2811E-40 153.68 By MS/MS By MS/MS 3 2 0 0 0 1745 2141 1971 4539;4540;4541;4542;4543 4467;4468;4469;4470;4471 4467 861 4249 5 FGEVVDCTLK DLKDYFSKFGEVVDCT EVVDCTLKLDPITGRS K F G L K L 0 0 0 1 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1166.5642 D6RAF8;Q14103;D6RD83;H0YA96;H0Y8G5;D6RF44;D6RBQ9 D6RAF8 120 129 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.0071123 94.309 By MS/MS By matching 1 1 26012000 12824000 13188000 1746 741 1972 4544;4545 4472 4472 1 FGEYNSNMSPEEK SNVFRDKRFGEYNSNM SNMSPEEKMMKRFALE R F G E K M 0 0 2 0 0 0 3 1 0 0 0 1 1 1 1 2 0 0 1 0 0 0 13 0 1530.6297 E9PFK5;P78316 E9PFK5 88 100 NOP14 Nucleolar protein 14 yes no 2 1.9636E-14 155.37 By MS/MS By MS/MS 3 3 211820000 114960000 96856000 1747 866 1973;1974;1975 4546;4547;4548;4549;4550;4551 4473;4474;4475;4476;4477 4476 327 1595 4 FGHSSFDQAEISHSESEHLPAR DRQSNTTKFGHSSFDQ ESEHLPARDSPSLSEN K F G A R D 2 1 0 1 0 1 3 1 3 1 1 0 0 2 1 5 0 0 0 0 0 0 22 0 2467.1153 Q9H089 Q9H089 268 289 LSG1 Large subunit GTPase 1 homolog yes yes 4 0.0057451 51.524 By MS/MS By MS/MS 1 1 12247000 5979700 6267600 1748 2799 1976 4552;4553 4478;4479 4478 5842;5843 2 FGLNVSSISR KLKERAQRFGLNVSSI LNVSSISRKSEDDEKL R F G S R K 0 1 1 0 0 0 0 1 0 1 1 0 0 1 0 3 0 0 0 1 0 0 10 0 1078.5771 H0YHG0;F8VZQ9;P82979 H0YHG0 470 479 SARNP SAP domain-containing ribonucleoprotein yes no 2 0.0029415 95.273 By MS/MS By MS/MS 1 1 5685900 2739200 2946700 1749 1186 1977 4554;4555 4480;4481 4480 2227 2 FGQAATMEGIGAIGGTPPAFNR LTPPTTERFGQAATME GTPPAFNRAAPGAEFA R F G N R A 4 1 1 0 0 1 1 5 0 2 0 0 1 2 2 0 2 0 0 0 0 0 22 0 2162.0579 Q15233 Q15233 435 456 NONO Non-POU domain-containing octamer-binding protein yes yes 2;3 2.5472E-169 245.11 By MS/MS By MS/MS 2 3 1012600000 565880000 446760000 1750 2131 1978;1979 4556;4557;4558;4559;4560 4482;4483;4484;4485;4486;4487;4488;4489;4490;4491;4492;4493 4491 849 7594 12 FGSADNIAHLK FANLIRNKFGSADNIA ADNIAHLKNSLEEFRP K F G L K N 2 0 1 1 0 0 0 1 1 1 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1171.5986 G3V207;G5E963;A0A1B0GUZ3;A0A0C4DFR1;Q9ULS5;O75069 G3V207 183 193 TMCC3;TMCC2 Transmembrane and coiled-coil domains protein 3;Transmembrane and coiled-coil domains protein 2 yes no 2 0.0050686 81.239 By matching By MS/MS 1 1 8146000 4233700 3912300 1751 295 1980 4561;4562 4494 4494 521 1 FGSADNIPNLK IASLIRNKFGSADNIP ADNIPNLKDSLEEGQV K F G L K D 1 0 2 1 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 0 0 11 0 1174.5982 Q6N039;E9PC87;O94876 Q6N039 56 66 DKFZp686H13261;TMCC1 Transmembrane and coiled-coil domains protein 1 yes no 2 0.024582 85.973 By MS/MS 1 0 0 0 1752 848 1981 4563 4495 4495 1578 1 FGSNINLEADES LKVQLYAKFGSNINLE INLEADES________ K F G E S - 1 0 2 1 0 0 2 1 0 1 1 0 0 1 0 2 0 0 0 0 0 0 12 0 1294.5677 Q9NQP4 Q9NQP4 123 134 PFDN4 Prefoldin subunit 4 yes yes 2 0.00031057 115.34 By MS/MS By MS/MS 1 1 21836000 11029000 10806000 1753 2895 1982 4564;4565 4496;4497 4496 6095 2 FGSTGSTPPVSPTPSER VASSGVVKFGSTGSTP VSPTPSERSLLSTGDE K F G E R S 0 1 0 0 0 0 1 2 0 0 0 0 0 1 4 4 3 0 0 1 0 0 17 0 1702.8162 W0Z7M9;E7ER32;A0A087X287;Q969V6;B0QY83;A0A087WU73 W0Z7M9 479 495 mkl1;MKL1 MKL/myocardin-like protein 1 yes no 2 0.00059503 93.342 By MS/MS By MS/MS 1 2 113340000 49472000 63868000 1754 3229 1983;1984 4566;4567;4568 4498;4499 4498 6828;6829;6830;6831;7971 2 FGTFGGLGSK KGKHGKLKFGTFGGLG TFGGLGSKSKGHYEVT K F G S K S 0 0 0 0 0 0 0 4 0 0 1 1 0 2 0 1 1 0 0 0 0 0 10 0 969.49198 Q09666 Q09666 5822 5831 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0043663 84.892 By MS/MS By MS/MS 1 1 15567000 8682200 6885200 1755 2020 1985 4569;4570 4500;4501 4500 3911 2 FGYVDFESAEDLEK VRIGMTRKFGYVDFES ESAEDLEKALELTGLK K F G E K A 1 0 0 2 0 0 3 1 0 0 1 1 0 2 0 1 0 0 1 1 0 0 14 0 1647.7304 P19338 P19338 349 362 NCL Nucleolin yes yes 2 0.0031389 90.697 By matching By MS/MS 1 1 14234000 6859400 7374200 1756 1732 1986 4571;4572 4502 4502 1 FHALSSPQSPFPSTPTSR PESQKSFKFHALSSPQ FPSTPTSRRALHRTLS K F H S R R 1 1 0 0 0 1 0 0 1 0 1 0 0 2 4 5 2 0 0 0 0 0 18 0 1942.9537 F5GYF8;O43166 F5GYF8 1014 1031 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 3 0.016249 50.055 By MS/MS By matching 1 1 12362000 4676200 7685400 1757 947 1987 4573;4574 4503 4503 1778 1 FHDTSSPLMVTPPSAEAHWAVR NLSMPPPKFHDTSSPL AEAHWAVRVEEKAKFD K F H V R V 3 1 0 1 0 0 1 0 2 0 1 0 1 1 3 3 2 1 0 2 0 0 22 0 2435.1692 M0R165;Q9UBC2 M0R165 103 124 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 3 0.00047984 70.413 By MS/MS By MS/MS 2 2 54859000 29282000 25576000 1758 1422 1988;1989 4575;4576;4577;4578 4504;4505;4506;4507;4508 4504 498 2609;2610;7279 4 FHMDSETHDPIDLQTKELR TLSSPEVRFHMDSETH DLQTKELRETNSMVEE R F H L R E 0 1 0 3 0 1 2 0 2 1 2 1 1 1 1 1 2 0 0 0 0 0 19 1 2311.0903 G3V1J5;Q9Y2L1 G3V1J5 477 495 DIS3 Exosome complex exonuclease RRP44 yes no 3 0.032356 40.844 By matching By MS/MS 1 2 35517000 12845000 22671000 1759 1063 1990 4579;4580;4581 4509 4509 381 1 FHSPSTTWSPNKDTPQEK KPRTRRSRFHSPSTTW NKDTPQEKKRPQSPSP R F H E K K 0 0 1 1 0 1 1 0 1 0 0 2 0 1 3 3 3 1 0 0 0 0 18 1 2085.9756 A0A0A0MTP7;F8VXG7;Q99590 A0A0A0MTP7 734 751 SCAF11 Protein SCAF11 yes no 3 0.0007195 78.902 By MS/MS By MS/MS 2 2 85940000 36568000 49371000 1760 277 1991;1992 4582;4583;4584;4585 4510;4511;4512 4511 485;486;487;6917 2 FICVTPTTCSNTIDLPMSPR AAPYLKTKFICVTPTT IDLPMSPRTLDSLMQF K F I P R T 0 1 1 1 2 0 0 0 0 2 1 0 1 1 3 2 4 0 0 1 0 0 20 0 2309.0854 G8JLH9;P40763 G8JLH9 612 631 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 yes no 2;3 3.2998E-07 133.35 By MS/MS By MS/MS 4 4 162700000 84540000 78161000 1761 1109 1993;1994 4586;4587;4588;4589;4590;4591;4592;4593 4513;4514;4515;4516;4517;4518;4519;4520 4520 399 2090 8 FIEDLNMYEASK DLGLEASKFIEDLNMY LNMYEASKDGLFRVDK K F I S K D 1 0 1 1 0 0 2 0 0 1 1 1 1 1 0 1 0 0 1 0 0 0 12 0 1458.6701 C9JRJ5;Q9UGP4 C9JRJ5 14 25 LIMD1 LIM domain-containing protein 1 yes no 2 0.0057736 68.893 By matching By MS/MS 1 1 15913000 7599700 8313300 1762 689 1995 4594;4595 4521 4521 268 8094 1 FIEDLNMYEASKDGLFR DLGLEASKFIEDLNMY ASKDGLFRVDKGAGNN K F I F R V 1 1 1 2 0 0 2 1 0 1 2 1 1 2 0 1 0 0 1 0 0 0 17 1 2046.9721 C9JRJ5;Q9UGP4 C9JRJ5 14 30 LIMD1 LIM domain-containing protein 1 yes no 3 0.00011841 112.8 By MS/MS By MS/MS 1 1 21028000 12484000 8543600 1763 689 1996 4596;4597 4522;4523 4523 268 8094 2 FIEEQLTNKKAVTGENNFTDTMR WELFKQRRFIEEQLTN NNFTDTMRHMLSSRLS R F I M R H 1 1 3 1 0 1 3 1 0 1 1 2 1 2 0 0 4 0 0 1 0 0 23 2 2685.3068 E7EUR8;A0A1B0GVL4;P78312;D6RFZ4 E7EUR8 22 44 FAM193A Protein FAM193A yes no 3 0.021617 52.095 By MS/MS 1 21676000 21676000 0 1764 429 1997 4598 4524 4524 165 1 FIEIAAR RAPQCLGKFIEIAARK KFIEIAARKKRNFILD K F I A R K 2 1 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 7 0 818.46504 Q00839 Q00839 566 572 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 0.016015 119.22 By MS/MS By matching 1 1 13390000 6783900 6606000 1765 1976 1998 4599;4600 4525 4525 1 FIGQYGNGLK KKRLSTLKFIGQYGNG GQYGNGLKSGSMRIGK K F I L K S 0 0 1 0 0 1 0 3 0 1 1 1 0 1 0 0 0 0 1 0 0 0 10 0 1095.5713 Q86VD1 Q86VD1 95 104 MORC1 MORC family CW-type zinc finger protein 1 yes yes 2 0.017505 75.109 By matching By MS/MS 1 1 26773000 15173000 11600000 1766 2407 1999 4601;4602 4526 4526 8381 1 FIGSPRTPVSPVK PKIRSPRRFIGSPRTP RTPVSPVKFSPGDFWG R F I V K F 0 1 0 0 0 0 0 1 0 1 0 1 0 1 3 2 1 0 0 2 0 0 13 1 1383.7874 P23443 P23443 438 450 RPS6KB1 Ribosomal protein S6 kinase beta-1 yes yes 2 0.012189 66.826 By matching By MS/MS 1 1 28968000 13393000 15574000 1767 1756 2000 4603;4604 4527 4527 3312;3313;7412 0 FIHQQPQSSSPVYGSSAK QWQPSSSRFIHQQPQS PVYGSSAKTSSVSNPQ R F I A K T 1 0 0 0 0 3 0 1 1 1 0 1 0 1 2 5 0 0 1 1 0 0 18 0 1946.9486 F5GZ78;A0A1B0GTU4;P49023;F5H836;A0A1B0GU60 F5GZ78 74 91 PXN Paxillin yes no 2;3 0.00034411 89.502 By MS/MS By MS/MS 3 3 65781000 32617000 33164000 1768 414 2001;2002 4605;4606;4607;4608;4609;4610 4528;4529;4530;4531;4532 4528 764;765;766;8045 5 FIIGSVSEDNSEDEISNLVK LELNQHSRFIIGSVSE DEISNLVKLDLLEEKE R F I V K L 0 0 2 2 0 0 3 1 0 3 1 1 0 1 0 4 0 0 0 2 0 0 20 0 2194.0641 A0A0C4DGT1;Q13085;A0A087X2F8;A0A087X126;A0A087WYK6 A0A0C4DGT1 19 38 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 2 0.00064064 89.831 By MS/MS By MS/MS 2 1 63466000 51214000 12251000 1769 326 2003;2004 4611;4612;4613 4533;4534 4534 569;570;571 2 FIIPQIVK QRNVNVFKFIIPQIVK FIIPQIVKYSPDCIII K F I V K Y 0 0 0 0 0 1 0 0 0 3 0 1 0 1 1 0 0 0 0 1 0 0 8 0 956.60589 P07195;A8MW50;C9J7H8 P07195 120 127 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 2 0.019576 97.473 By MS/MS By matching 1 1 16695000 8157000 8538000 1770 1649 2005 4614;4615 4535 4535 1 FILNDGTMLSAHTKCK TASSPSYRFILNDGTM LSAHTKCKLCYPQSPD R F I C K L 1 0 1 1 1 0 0 1 1 1 2 2 1 1 0 1 2 0 0 0 0 0 16 1 1834.907 B5MCN7;Q15788 B5MCN7 179 194 NCOA1 Nuclear receptor coactivator 1 yes no 2 0.018329 49.632 By MS/MS 1 2466000 0 2466000 1771 576 2006 4616 4536 4536 233 1056 1 FINDLMQVLYTNEYMATHSLTGAK CNKSKPQKFINDLMQV THSLTGAKSSTSRDKA K F I A K S 2 0 2 1 0 1 1 1 1 1 3 1 2 1 0 1 3 0 2 1 0 0 24 0 2759.3299 Q5SZJ8 Q5SZJ8 192 215 BEND6 BEN domain-containing protein 6 yes yes 3 0.031773 44.415 By MS/MS 1 0 0 0 1772 2234 2007 4617 4537 4537 891 1 FIQELSGSSPK QQNTQLKRFIQELSGS ELSGSSPKRRRAEDKD R F I P K R 0 0 0 0 0 1 1 1 0 1 1 1 0 1 1 3 0 0 0 0 0 0 11 0 1191.6136 I3L254;Q01664 I3L254 56 66 TFAP4 Transcription factor AP-4 yes no 2 4.8505E-07 150.51 By MS/MS By MS/MS 1 1 239350000 126480000 112880000 1773 1308 2008 4618;4619 4538;4539 4539 2430;2431;2432 2 FIQELSGSSPKR QQNTQLKRFIQELSGS LSGSSPKRRRAEDKDE R F I K R R 0 1 0 0 0 1 1 1 0 1 1 1 0 1 1 3 0 0 0 0 0 0 12 1 1347.7147 I3L254;Q01664 I3L254 56 67 TFAP4 Transcription factor AP-4 yes no 2 0.0011202 98.048 By MS/MS By MS/MS 1 2 29473000 11731000 17741000 1774 1308 2009 4620;4621;4622 4540;4541 4540 2430;2431;2432 2 FIQENVFVAANHNGSPLSIK ETVGRVKRFIQENVFV NGSPLSIKEAPKELSF R F I I K E 2 0 3 0 0 1 1 1 1 2 1 1 0 2 1 2 0 0 0 2 0 0 20 0 2184.1328 E9PFD2;P11172 E9PFD2 200 219 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase yes no 3 1.0467E-16 147.45 By MS/MS By MS/MS 3 3 47305000 26610000 20695000 1775 863 2010;2011 4623;4624;4625;4626;4627;4628 4542;4543;4544;4545;4546;4547 4543 34;35 1593 6 FITLLLPGGAQTAVRPGSPSTSTMR VLAANPNRFITLLLPG SPSTSTMRLDLQFQAI R F I M R L 2 2 0 0 0 1 0 3 0 1 3 0 1 1 3 3 4 0 0 1 0 0 25 1 2557.3686 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1333 1357 TRRAP Transformation/transcription domain-associated protein yes no 3 3.2937E-07 97.346 By MS/MS By MS/MS 2 2 110470000 63942000 46524000 1776 933 2012;2013 4629;4630;4631;4632 4548;4549;4550;4551;4552 4550 348 1748;7125 5 FIYEAWQGVER PAHEENVRFIYEAWQG EAWQGVERDLRGQVPG R F I E R D 1 1 0 0 0 1 2 1 0 1 0 0 0 1 0 0 0 1 1 1 0 0 11 0 1396.6776 I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L2L5 34 44 FAM195B Protein FAM195B yes no 2 1.9595E-05 134.59 By MS/MS By MS/MS 1 1 25904000 12835000 13069000 1777 674 2014 4633;4634 4553;4554 4553 8093 2 FKIDSNISPK KKMKTSCKFKIDSNIS IDSNISPKKDSKEFTQ K F K P K K 0 0 1 1 0 0 0 0 0 2 0 2 0 1 1 2 0 0 0 0 0 0 10 1 1147.6237 Q9H501 Q9H501 146 155 ESF1 ESF1 homolog yes yes 3 0.014268 66.784 By MS/MS By MS/MS 1 1 2490400 0 2490400 1778 2837 2015 4635;4636 4555;4556 4555 5957 2 FLEDDTSDPTYTSALGGK VSDFGLSRFLEDDTSD YTSALGGKIPIRWTAP R F L G K I 1 0 0 3 0 0 1 2 0 0 2 1 0 1 1 2 3 0 1 0 0 0 18 0 1915.8687 B1AKC9;P29323 B1AKC9 765 782 EPHB2 Receptor protein-tyrosine kinase;Ephrin type-B receptor 2 yes no 2 0.00015204 124.29 By MS/MS By MS/MS 1 1 30639000 15122000 15517000 1779 520 2016 4637;4638 4557;4558 4557 975;8064 2 FLEENSSDPTYTSSLGGK VSDFGLSRFLEENSSD YTSSLGGKIPIRWTAP R F L G K I 0 0 1 1 0 0 2 2 0 0 2 1 0 1 1 4 2 0 1 0 0 0 18 0 1930.8796 P54760;Q96L35 P54760 764 781 EPHB4 Ephrin type-B receptor 4;Receptor protein-tyrosine kinase yes no 2 0.00053689 122.13 By MS/MS By MS/MS 2 2 96322000 49519000 46803000 1780 1904 2017;2018 4639;4640;4641;4642 4559;4560;4561;4562;4563;4564;4565 4561 3681;3682;3683;7490;8298 7 FLEENSSDPTYTSSLGGKIPIR VSDFGLSRFLEENSSD LGGKIPIRWTAPEAIA R F L I R W 0 1 1 1 0 0 2 2 0 2 2 1 0 1 2 4 2 0 1 0 0 0 22 1 2410.2016 P54760;Q96L35 P54760 764 785 EPHB4 Ephrin type-B receptor 4;Receptor protein-tyrosine kinase yes no 3 0.012917 49.655 By MS/MS 1 7813400 7813400 0 1781 1904 2019 4643 4566 4566 3681;3682;3683;7490;8298 1 FLEESVSMSPEER ESGSTLKKFLEESVSM VSMSPEERARYLENYD K F L E R A 0 1 0 0 0 0 4 0 0 0 1 0 1 1 1 3 0 0 0 1 0 0 13 0 1538.6923 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 86 98 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes no 2 6.25E-11 143.05 By MS/MS By MS/MS 1 1 12457000 5419100 7038200 1782 29 2020 4644;4645 4567;4568;4569 4567 15 58;59 3 FLENGSQEDLLHGNPGSTYLASNSTSAPNWK SQAGTSQRFLENGSQE STSAPNWKSLTSWTND R F L W K S 2 0 4 1 0 1 2 3 1 0 4 1 0 1 2 5 2 1 1 0 0 0 31 0 3333.5538 C9J6P4;Q7Z2W4 C9J6P4 330 360 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 3 0.0016133 55.158 By MS/MS By matching 1 1 22036000 9322000 12714000 1783 642 2021 4646;4647 4570 4570 1197 1 FLEQSMDIEDLK KPSRVKEKFLEQSMDI SMDIEDLKYCSEHSVN K F L L K Y 0 0 0 2 0 1 2 0 0 1 2 1 1 1 0 1 0 0 0 0 0 0 12 0 1466.6963 O95239;Q2VIQ3 O95239 1034 1045 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2 2.4929E-06 125.84 By matching By MS/MS 1 1 5996200 3467500 2528700 1784 1585 2022 4648;4649 4571 4571 3002 1 FLESPSR FNHPAIKKFLESPSRS KFLESPSRSSSPANQR K F L S R S 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 7 0 834.42357 Q9ULM3 Q9ULM3 115 121 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.025875 91.265 By MS/MS 1 11672000 11672000 0 1785 3046 2023 4650 4572 4572 6423 1 FLETDSEEEQEEVNEKK DRFRMDSRFLETDSEE QEEVNEKKTAEEEELA R F L K K T 0 0 1 1 0 1 7 0 0 0 1 2 0 1 0 1 1 0 0 1 0 0 17 1 2081.9277 F8WE42;F5H101;Q76FK4 F8WE42 885 901 NOL8 Nucleolar protein 8 yes no 2;3 0.001724 78.917 By matching By MS/MS 2 2 49054000 24923000 24131000 1786 957 2024 4651;4652;4653;4654 4573;4574 4574 1801;7129 2 FLGLINATCQLIGSVDEIEK F L E K 1 0 1 1 1 1 2 2 0 3 3 1 0 1 0 1 1 0 0 1 0 0 20 0 2219.1508 REV__P33402 yes yes 3 0.024956 43.955 By MS/MS 1 4767400 0 4767400 + 1787 3205 2025 4655 4575 4575 6803 1 FLILPDMLK YIRGSKIRFLILPDML LILPDMLKNAPMLKSM R F L L K N 0 0 0 1 0 0 0 0 0 1 3 1 1 1 1 0 0 0 0 0 0 0 9 0 1088.6304 P62318 P62318 70 78 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 2 0.018227 77.318 By MS/MS By MS/MS 1 1 2282400 0 2282400 1788 1941 2026 4656;4657 4576;4577 4576 761 2 FLKSPPLHK QETAKTGKFLKSPPLH LKSPPLHKNLDAREKS K F L H K N 0 0 0 0 0 0 0 0 1 0 2 2 0 1 2 1 0 0 0 0 0 0 9 1 1065.6335 E9PJA7 E9PJA7 334 342 BCLAF1 yes yes 3 0.01639 54.005 By MS/MS 1 4493600 4493600 0 1789 888 2027 4658 4578 4578 1654 1 FLLADNLYCK STNSMETRFLLADNLY LADNLYCKASVPPTDK R F L C K A 1 0 1 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 10 0 1255.6271 B4DWR3;P61758 B4DWR3 100 109 VBP1 Prefoldin subunit 3 yes no 2 0.00039833 115.71 By MS/MS By MS/MS 1 1 11868000 7403400 4464300 1790 567 2028 4659;4660 4579;4580 4580 8076 2 FLLELQISNNR SSVLAQNRFLLELQIS ELQISNNRLEDAGVRE R F L N R L 0 1 2 0 0 1 1 0 0 1 3 0 0 1 0 1 0 0 0 0 0 0 11 0 1345.7354 H0YCR7;P13489 H0YCR7 136 146 RNH1 Ribonuclease inhibitor yes no 2 0.031077 51.286 By MS/MS 1 0 0 0 1791 1170 2029 4661 4581 4581 1 FLMECRNSPVTK TRIIYDRKFLMECRNS CRNSPVTKTPPRDLPT K F L T K T 0 1 1 0 1 0 1 0 0 0 1 1 1 1 1 1 1 0 0 1 0 0 12 1 1480.7167 Q13541 Q13541 58 69 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 2 5.8869E-05 101.46 By MS/MS By matching 2 2 159020000 85850000 73170000 1792 2063 2030;2031 4662;4663;4664;4665 4582;4583 4583 823 4073;7557 1 FLMECRNSPVTKTPPR TRIIYDRKFLMECRNS PVTKTPPRDLPTIPGV K F L P R D 0 2 1 0 1 0 1 0 0 0 1 1 1 1 3 1 2 0 0 1 0 0 16 2 1931.971 Q13541 Q13541 58 73 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 3 0.018465 58.073 By MS/MS By MS/MS 1 1 34154000 17573000 16581000 1793 2063 2032 4666;4667 4584;4585 4585 823 4073;7557 2 FLNRSPEESFDIK KLWSYISKFLNRSPEE PEESFDIKEVKKPTLA K F L I K E 0 1 1 1 0 0 2 0 0 1 1 1 0 2 1 2 0 0 0 0 0 0 13 1 1580.7835 F5H7T0;F6RJM5;Q96S38 F5H7T0 207 219 RPS6KC1 Ribosomal protein S6 kinase delta-1 yes no 2 0.013309 93.152 By MS/MS By matching 1 1 30313000 15693000 14620000 1794 987 2033 4668;4669 4586 4586 1855;1856 1 FLPDVSASSPEEPHSDSEGAGSGAR LLDLWQPRFLPDVSAS EGAGSGARPHLLSVPE R F L A R P 3 1 0 2 0 0 3 3 1 0 1 0 0 1 3 6 0 0 0 1 0 0 25 0 2485.0993 Q8NC44 Q8NC44 124 148 FAM134A Protein FAM134A yes yes 3 5.0093E-05 78.3 By MS/MS 1 8533200 8533200 0 1795 2497 2034 4670 4587;4588 4588 5094 2 FLSHSTDSLNK ENMSNTWKFLSHSTDS HSTDSLNKISKVNEST K F L N K I 0 0 1 1 0 0 0 0 1 0 2 1 0 1 0 3 1 0 0 0 0 0 11 0 1247.6146 Q12802;A0A087WTD7;A8MYJ1;A0A087WY36 Q12802 1925 1935 AKAP13 A-kinase anchor protein 13 yes no 2 0.014359 63.602 By MS/MS By matching 1 1 9607600 5721400 3886200 1796 2026 2035 4671;4672 4589 4589 3940;3941 1 FLSLEYSPAGK TKQKCPERFLSLEYSP LEYSPAGKEYVRQLVY R F L G K E 1 0 0 0 0 0 1 1 0 0 2 1 0 1 1 2 0 0 1 0 0 0 11 0 1210.6234 Q9C0H5 Q9C0H5 382 392 ARHGAP39 Rho GTPase-activating protein 39 yes yes 2 1.2215E-05 132.86 By MS/MS 2 1629800 1629800 0 1797 2795 2036 4673;4674 4590;4591 4590 5836;8455 2 FMGSSLGTGLGTLGNTIR KNITDQQKFMGSSLGT GTLGNTIRSALQDEAD K F M I R S 0 1 1 0 0 0 0 5 0 1 3 0 1 1 0 2 3 0 0 0 0 0 18 0 1780.9142 Q9Y6V0;E9PE96 Q9Y6V0 4186 4203 PCLO Protein piccolo yes no 2 0.0293 46.592 By MS/MS 1 9912100 0 9912100 1798 3154 2037 4675 4592 4592 1251 0 FNEENYGVK WDPNEMFKFNEENYGV NEENYGVKTTYDSSLS K F N V K T 0 0 2 0 0 0 2 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 9 0 1098.4982 Q8WWM7;H3BUF6;H3BSK9 Q8WWM7 259 267 ATXN2L Ataxin-2-like protein yes no 2 1.0322E-09 164.53 By MS/MS By MS/MS 1 1 10670000 5540000 5130400 1799 2564 2038 4676;4677 4593;4594 4593 8405 2 FNEVAAQYSEDK EKLKSGMRFNEVAAQY AAQYSEDKARQGAFRL R F N D K A 2 0 1 1 0 1 2 0 0 0 0 1 0 1 0 1 0 0 1 1 0 0 12 0 1399.6256 H0Y4T6;J3KMW3;H0Y8P6;H0Y610;Q9Y237 H0Y4T6 71 82 PIN4 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes no 2 0.0075158 84.169 By MS/MS By matching 2 1 11234000 5893700 5340800 1800 1123 2039 4678;4679;4680 4595;4596 4596 2 FNISSHNQSPK HSFSGVQRFNISSHNQ SSHNQSPKRHSISHSP R F N P K R 0 0 2 0 0 1 0 0 1 1 0 1 0 1 1 3 0 0 0 0 0 0 11 0 1257.6102 Q9H1A4 Q9H1A4 369 379 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 2 0.0072449 77.644 By MS/MS By matching 1 1 10829000 5778400 5050600 1801 2814 2040 4681;4682 4597 4597 5883 1 FNSLPQYSPVTFDR LDEEFEKKFNSLPQYS YSPVTFDRKCVPVPRK K F N D R K 0 1 1 1 0 1 0 0 0 0 1 0 0 2 2 2 1 0 1 1 0 0 14 0 1669.81 C9JA69;Q8WY36 C9JA69 697 710 BBX HMG box transcription factor BBX yes no 2 0.0041053 82.102 By MS/MS 1 4252200 4252200 0 1802 651 2041 4683 4598 4598 1209 1 FNSYDISR TPVTKLQRFNSYDISR FNSYDISRDTLYVSKC R F N S R D 0 1 1 1 0 0 0 0 0 1 0 0 0 1 0 2 0 0 1 0 0 0 8 0 1000.4614 B4DFB6;Q6IQ26 B4DFB6 167 174 DENND5A DENN domain-containing protein 5A yes no 2 0.020486 72.848 By matching By MS/MS 1 1 22925000 12849000 10076000 1803 547 2042 4684;4685 4599 4599 1023 1 FNVATQNVSTLSSKVK EPLCAKTKFNVATQNV STLSSKVKRKDAKHFI K F N V K R 1 0 2 0 0 1 0 0 0 0 1 2 0 1 0 3 2 0 0 3 0 0 16 1 1721.9312 Q96HI0 Q96HI0 82 97 SENP5 Sentrin-specific protease 5 yes yes 2 0.025486 54.784 By MS/MS 1 3613800 3613800 0 1804 2663 2043 4686 4600 4600 5492 0 FNVWDTAGQEK HTNRGPIKFNVWDTAG WDTAGQEKFGGLRDGY K F N E K F 1 0 1 1 0 1 1 1 0 0 0 1 0 1 0 0 1 1 0 1 0 0 11 0 1293.599 F5H018;B5MDF5;J3KQE5;P62826;H0YFC6 F5H018 57 67 RAN GTP-binding nuclear protein Ran yes no 2 1.6784E-05 139.43 By MS/MS By MS/MS 1 1 34478000 16615000 17863000 1805 580 2044 4687;4688 4601;4602 4602 2 FPDRLAEDEGDSEPEAVGQSR YVRRKRKKFPDRLAED PEAVGQSRGRRQKK__ K F P S R G 2 2 0 3 0 1 4 2 0 0 1 0 0 1 2 2 0 0 0 1 0 0 21 1 2303.0302 Q9UIG0 Q9UIG0 1457 1477 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 3 0.008518 54.834 By MS/MS 1 7010800 0 7010800 1806 3009 2045 4689 4603 4603 6340 1 FPGQLNADLR SGVTTCLRFPGQLNAD GQLNADLRKLAVNMVP R F P L R K 1 1 1 1 0 1 0 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 10 0 1129.588 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A0B4J269;Q13509;K7ESM5;A0A075B736;Q5SQY0;A6NNZ2;Q9BUF5;G3V2A3;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;M0R2D3;P68371;P04350;Q3ZCM7 Q5JP53 224 233 TUBB;TUBB2B;TUBB2A;TUBB3;TUBB6;TUBB8;TUBB1;TUBB4A;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-6 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain no no 2 0.0066102 99.013 By MS/MS By matching 2 2 19471000 11806000 7664600 1807 1653;1958 2046 4690;4691;4692;4693 4604;4605;4606 4605 3 FPKSTEK ________________ RFPKSTEKSMGRGARA R F P E K S 0 0 0 0 0 0 1 0 0 0 0 2 0 1 1 1 1 0 0 0 0 0 7 1 835.44397 J3QS90 J3QS90 3 9 OTOP3 yes yes 1 0.0079421 77.374 By MS/MS 1 31048000 31048000 0 1808 1360 2047 4694 4607 4607 2515;7256 1 FPPEDFRHSPEDFR RHSSEDFRFPPEDFRH RHSPEDFRRPREEDFR R F P F R R 0 2 0 2 0 0 2 0 1 0 0 0 0 3 3 1 0 0 0 0 0 0 14 1 1774.8063 B9ZVT1;Q8IXT5 B9ZVT1 567 580 RBM12B RNA-binding protein 12B yes no 3 0.0078646 69.846 By MS/MS By MS/MS 2 3 38586000 21428000 17158000 1809 614 2048 4695;4696;4697;4698;4699 4608;4609;4610;4611 4609 1116 3 FPSPHPSPAK SSSTSAEKFPSPHPSP SPHPSPAKLKATAGH_ K F P A K L 1 0 0 0 0 0 0 0 1 0 0 1 0 1 4 2 0 0 0 0 0 0 10 0 1063.5451 B7ZB74;O14681 B7ZB74 151 160 EI24 Etoposide-induced protein 2.4 homolog yes no 2 0.0091175 76.326 By MS/MS By MS/MS 2 2 69487000 34817000 34670000 1810 595 2049;2050 4700;4701;4702;4703 4612;4613;4614 4612 1085 3 FPSSHRRASPGLSMPSSSPPIK GNSPSSLKFPSSHRRA PSSSPPIKKYSPPSPG K F P I K K 1 2 0 0 0 0 0 1 1 1 1 1 1 1 5 7 0 0 0 0 0 0 22 2 2322.1903 P57682 P57682 84 105 KLF3 Krueppel-like factor 3 yes yes 3 0.031411 50.938 By MS/MS 1 0 0 0 1811 1921 2051 4704 4615 4615 1 FPTTATKISPK TPTSPIKKFPTTATKI TATKISPKEEERKDES K F P P K E 1 0 0 0 0 0 0 0 0 1 0 2 0 1 2 1 3 0 0 0 0 0 11 1 1189.6707 O14974;F8VZN8;H0YIS4;H0YHI8 O14974 414 424 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 3 0.0017971 99.927 By MS/MS By MS/MS 1 1 3309900 3309900 0 1812 1463 2052 4705;4706 4616;4617 4617 2719 2 FPYSPSPPMANGAAR AAAHVSARFPYSPSPP PMANGAAREPGGYAAA R F P A R E 3 1 1 0 0 0 0 1 0 0 0 0 1 1 4 2 0 0 1 0 0 0 15 0 1561.7347 Q92908 Q92908 263 277 GATA6 Transcription factor GATA-6 yes yes 2 0.0053399 78.342 By MS/MS By MS/MS 1 2 15384000 7117200 8266800 1813 2609 2053 4707;4708;4709 4618;4619 4618 122 1043 5360 1 FQDVGPQAPVGSVYQK SFHKESGRFQDVGPQA PVGSVYQKTNAVSEIK R F Q Q K T 1 0 0 1 0 3 0 2 0 0 0 1 0 1 2 1 0 0 1 3 0 0 16 0 1718.8628 H0Y5J4;Q9UJU6;B4DDD6 H0Y5J4 78 93 DBNL Drebrin-like protein yes no 3 0.019707 61.962 By MS/MS 1 0 0 0 1814 1129 2054 4710 4620 4620 2148 1 FQELDRFMHYYTRFK EAEKKHKRFQELDRFM MHYYTRFKNHEHSYQL R F Q F K N 0 2 0 1 0 1 1 0 1 0 1 1 1 3 0 0 1 0 2 0 0 0 15 2 2079.9989 Q9P2G1 Q9P2G1 592 606 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 yes yes 3 0.0079883 62.088 By MS/MS 1 3194400 0 3194400 1815 2981 2055 4711 4621 4621 1182 8485;8486 1 FQELLASPAYR LLEEERTRFQELLASP LLASPAYRASPLVAIG R F Q Y R A 2 1 0 0 0 1 1 0 0 0 2 0 0 1 1 1 0 0 1 0 0 0 11 0 1293.6717 Q9NSI2 Q9NSI2 197 207 FAM207A Protein FAM207A yes yes 2 9.8288E-06 128.21 By MS/MS By MS/MS 1 1 5259500 5259500 0 1816 2914 2056 4712;4713 4622;4623 4622 6149 2 FQELSQPR TPGSEQWKFQELSQPR FQELSQPRSHTSLKVS K F Q P R S 0 1 0 0 0 2 1 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 8 0 1003.5087 O60271;A0A087X2D8;D6RHI8 O60271 234 241 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2 0.010147 92.239 By matching By MS/MS 1 1 4983700 1614100 3369600 1817 1514 2057 4714;4715 4624 4624 2853 1 FQEQECPPSPEPTR ELVRVIRKFQEQECPP PPSPEPTRKEKDKKGC K F Q T R K 0 1 0 0 1 2 3 0 0 0 0 0 0 1 4 1 1 0 0 0 0 0 14 0 1700.7464 P62070 P62070 178 191 RRAS2 Ras-related protein R-Ras2 yes yes 2 8.3316E-21 124.04 By MS/MS By MS/MS 1 1 25089000 13985000 11104000 1818 1933 2058 4716;4717 4625;4626 4625 3729;7502 0 FQEQECPPSPEPTRK ELVRVIRKFQEQECPP PSPEPTRKEKDKKGCH K F Q R K E 0 1 0 0 1 2 3 0 0 0 0 1 0 1 4 1 1 0 0 0 0 0 15 1 1828.8414 P62070 P62070 178 192 RRAS2 Ras-related protein R-Ras2 yes yes 2;3 0.00014935 99.011 By MS/MS By MS/MS 2 2 34917000 19806000 15110000 1819 1933 2059 4718;4719;4720;4721 4627;4628;4629 4629 3729;7502 3 FQETEFLSPPR QKRIDQSKFQETEFLS TEFLSPPRKVPRLSEK K F Q P R K 0 1 0 0 0 1 2 0 0 0 1 0 0 2 2 1 1 0 0 0 0 0 11 0 1349.6616 P42166 P42166 417 427 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 1.8866E-20 175.88 By MS/MS By MS/MS 3 3 24741000 10249000 14492000 1820 1823 2060 4722;4723;4724;4725;4726;4727 4630;4631;4632;4633;4634;4635 4635 3433 6 FQPSSVLSPYER RLGYVVRRFQPSSVLS SVLSPYERQLNLDASV R F Q E R Q 0 1 0 0 0 1 1 0 0 0 1 0 0 1 2 3 0 0 1 1 0 0 12 0 1408.6987 J3QLM6;Q7Z6J9 J3QLM6 116 127 TSEN54 tRNA-splicing endonuclease subunit Sen54 yes no 2 0.0010078 96.756 By MS/MS By MS/MS 1 1 5447300 2646500 2800800 1821 1350 2061 4728;4729 4636;4637;4638 4638 2495 3 FQSLGVAFYR WDTAGQERFQSLGVAF SLGVAFYRGADCCVLV R F Q Y R G 1 1 0 0 0 1 0 1 0 0 1 0 0 2 0 1 0 0 1 1 0 0 10 0 1186.6135 P51149;C9J8S3;C9J592;C9IZZ0 P51149 70 79 RAB7A Ras-related protein Rab-7a yes no 2 0.0031116 100.93 By MS/MS By MS/MS 1 1 13424000 7802000 5621700 1822 1874 2062 4730;4731 4639;4640 4640 3634 2 FQSPQIQATISPPLQPK QQPKSRPKFQSPQIQA ISPPLQPKTKTYEEDP K F Q P K T 1 0 0 0 0 4 0 0 0 2 1 1 0 1 4 2 1 0 0 0 0 0 17 0 1879.0203 A0A087WYN9;Q7Z478 A0A087WYN9 190 206 DHX29 ATP-dependent RNA helicase DHX29 yes no 2;3 5.2139E-23 159.44 By MS/MS By MS/MS 2 3 66848000 34077000 32771000 1823 126 2063 4732;4733;4734;4735;4736 4641;4642;4643;4644;4645 4643 213 4 FQTGNKSPEVLR RERDVDLRFQTGNKSP NKSPEVLRAFDVPDAE R F Q L R A 0 1 1 0 0 1 1 1 0 0 1 1 0 1 1 1 1 0 0 1 0 0 12 1 1374.7256 Q96S66 Q96S66 432 443 CLCC1 Chloride channel CLIC-like protein 1 yes yes 2;3 0.0060975 84.759 By MS/MS By MS/MS 2 2 177730000 107920000 69811000 1824 2709 2064 4737;4738;4739;4740 4646;4647 4647 5591 2 FQYRSTPCPSVK DRRRNPRRFQYRSTPC STPCPSVKHGDEWGEP R F Q V K H 0 1 0 0 1 1 0 0 0 0 0 1 0 1 2 2 1 0 1 1 0 0 12 1 1468.7133 A0A0A0MRZ1;E9PDK2;Q9H9P5 A0A0A0MRZ1 242 253 UNKL Putative E3 ubiquitin-protein ligase UNKL yes no 2 0.020948 58.246 By MS/MS 1 0 0 0 1825 237 2065 4741 4648 4648 414;415;8014 1 FRTPSFLKK SPSKKKKKFRTPSFLK RTPSFLKKSKKKSDS_ K F R K K S 0 1 0 0 0 0 0 0 0 0 1 2 0 2 1 1 1 0 0 0 0 0 9 2 1122.655 P35611;P35612;Q9UEY8 P35611 722 730 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin no no 3 0.017783 69.815 By MS/MS By MS/MS 1 1 26263000 16707000 9556400 1826 1799;2998;1800 2066 4742;4743 4649;4650;4651 4649 3395 3 FSASGELGNGNIK SCAKDGVKFSASGELG ELGNGNIKLSQTSNVD K F S I K L 1 0 2 0 0 0 1 3 0 1 1 1 0 1 0 2 0 0 0 0 0 0 13 0 1292.6361 P12004 P12004 169 181 PCNA Proliferating cell nuclear antigen yes yes 2 0.0016671 107.83 By MS/MS By MS/MS 1 1 6539000 2396400 4142700 1827 1685 2067 4744;4745 4652;4653 4652 72 2 FSDQAGPAIPTSNSYSK SANPKQRRFSDQAGPA PTSNSYSKKTQSNNAE R F S S K K 2 0 1 1 0 1 0 1 0 1 0 1 0 1 2 4 1 0 1 0 0 0 17 0 1768.8268 E7ETY4;E9PC69 E7ETY4 375 391 MARK2 yes no 2 0.0048663 75.319 By MS/MS By matching 1 1 17043000 7742100 9301000 1828 823 2068 4746;4747 4654 4654 1515;1516;1517 1 FSECYGPVFTIHLGPR HICDSIMKFSECYGPV FTIHLGPRRVVVLCGH K F S P R R 0 1 0 0 1 0 1 2 1 1 1 0 0 2 2 1 1 0 1 1 0 0 16 0 1878.9087 P20853 P20853 61 76 CYP2A7 Cytochrome P450 2A7 yes yes 2 0.016809 54.501 By MS/MS 1 11534000 11534000 0 1829 1741 2069 4748 4655 4655 3278;8242 0 FSEGVLQSPSQDQEK PTSLVQRRFSEGVLQS SPSQDQEKLGGSLAAL R F S E K L 0 0 0 1 0 3 2 1 0 0 1 1 0 1 1 3 0 0 0 1 0 0 15 0 1677.7846 Q9C0C2 Q9C0C2 428 442 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0033214 81.651 By MS/MS 1 9424800 0 9424800 1830 2791 2070 4749 4656 4656 5814;5815 1 FSFKKSFK TPKKKKKRFSFKKSFK FSFKKSFKLSGFSFKK R F S F K L 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 2 0 0 0 0 0 0 8 2 1017.5648 P29966 P29966 158 165 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.021342 59.84 By MS/MS 1 2024100 0 2024100 1831 1776 2071 4750 4657;4658 4658 3355;3356 2 FSFRSQEDLNEPIKR GVTEAIEKFSFRSQED DLNEPIKRDGKKECDI K F S K R D 0 2 1 1 0 1 2 0 0 1 1 1 0 2 1 2 0 0 0 0 0 0 15 2 1864.9432 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 929 943 CLASP1 CLIP-associating protein 1 yes no 3 0.00010805 118.73 By MS/MS By MS/MS 1 1 33298000 18766000 14532000 1832 1043 2072 4751;4752 4659;4660;4661 4659 1970;1971 3 FSGFSAKPNNSGEAPSSPTPK VTSTNPRKFSGFSAKP APSSPTPKRSLSSSKC K F S P K R 2 0 2 0 0 0 1 2 0 0 0 2 0 2 4 5 1 0 0 0 0 0 21 1 2106.0018 P49916;K7ENR9;K7ERZ5 P49916 226 246 LIG3 DNA ligase 3 yes no 3 3.2482E-05 115.38 By MS/MS By MS/MS 1 1 102960000 45795000 57168000 1833 1865 2073 4753;4754 4662;4663;4664 4662 3619;3620 3 FSGGFGAR RGRSKSSRFSGGFGAR FSGGFGARDYRQSSGA R F S A R D 1 1 0 0 0 0 0 3 0 0 0 0 0 2 0 1 0 0 0 0 0 0 8 0 797.38204 A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O00571;A0A087WVZ1;A0A0J9YVQ7;O15523 A0A0D9SFB3 593 600 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.031478 60.972 By matching By MS/MS 1 1 76728000 40179000 36550000 1834 340 2074 4755;4756 4665 4665 1 FSGNMTYKWNTR YQEFLIRKFSGNMTYK MTYKWNTRIETYYFPS K F S T R I 0 1 2 0 0 0 0 1 0 0 0 1 1 1 0 1 2 1 1 0 0 0 12 1 1503.6929 P59536 P59536 164 175 TAS2R41 Taste receptor type 2 member 41 yes yes 2 0.031167 40.983 By MS/MS 1 0 0 0 1835 1924 2075 4757 4666 4666 749 1 FSGSTSGNTTTLTISR RYPGIPERFSGSTSGN TTTLTISRVLTEDEAD R F S S R V 0 1 1 0 0 0 0 2 0 1 1 0 0 1 0 4 5 0 0 0 0 0 16 0 1628.8006 A0A075B6J6 A0A075B6J6 80 95 IGLV3-22 yes yes 2 0.02162 55.031 By MS/MS 1 167030000 167030000 0 1836 11 2076 4758 4667 4667 20;21 1 FSKEEPVSSGPEEAVGK SGSKKKRKFSKEEPVS GPEEAVGKSSSKKKKK K F S G K S 1 0 0 0 0 0 4 2 0 0 0 2 0 1 2 3 0 0 0 2 0 0 17 1 1775.8578 O00567 O00567 562 578 NOP56 Nucleolar protein 56 yes yes 2;3 1.352E-21 154.31 By MS/MS By MS/MS 2 3 171110000 64439000 106670000 1837 1443 2077;2078 4759;4760;4761;4762;4763 4668;4669;4670;4671 4669 2651;2652 4 FSLCSDNLEGISEGPSNR GKPDKTLRFSLCSDNL ISEGPSNRSNSVSSLD R F S N R S 0 1 2 1 1 0 2 2 0 1 2 0 0 1 1 4 0 0 0 0 0 0 18 0 1980.8847 H0Y7I9;C9IZ08;Q14C86;B4DGD8;A0A0A0MQV8 H0Y7I9 428 445 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2 0.020975 59.75 By MS/MS By matching 1 1 9845200 5648000 4197200 1838 617 2079 4764;4765 4672 4672 1133 1 FSLSDDQR FLENEDTKFSLSDDQR FSLSDDQRDRWFSDLS K F S Q R D 0 1 0 2 0 1 0 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 8 0 966.44067 Q6UB99 Q6UB99 831 838 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 2 0.030426 62.166 By matching By MS/MS 1 1 9017500 5721600 3295900 1839 2337 2080 4766;4767 4673 4673 1 FSLSPSLGPQASR SPCPPQRRFSLSPSLG SLGPQASRFLPSARSS R F S S R F 1 1 0 0 0 1 0 1 0 0 2 0 0 1 2 4 0 0 0 0 0 0 13 0 1345.699 Q9NYF3 Q9NYF3 231 243 FAM53C Protein FAM53C yes yes 2 0.00022167 119.17 By MS/MS By MS/MS 1 1 20042000 10528000 9513000 1840 2946 2081 4768;4769 4674;4675 4674 6208;6209 2 FSNLSPESQQQDVKSLEFTVEPK GPLLTSVRFSNLSPES LEFTVEPKLQSVKHVK R F S P K L 0 0 1 1 0 3 3 0 0 0 2 2 0 2 2 4 1 0 0 2 0 0 23 1 2636.297 Q68DN1 Q68DN1 48 70 C2orf16 Uncharacterized protein C2orf16 yes yes 3 0.029239 47.75 By MS/MS 1 0 0 0 1841 2295 2082 4770 4676 4676 1 FSPDSQYIDNR KNNYYSSRFSPDSQYI DSQYIDNRSVNSAGLH R F S N R S 0 1 1 2 0 1 0 0 0 1 0 0 0 1 1 2 0 0 1 0 0 0 11 0 1340.5997 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8 Q5VWV2 338 348 PARD3 Partitioning defective 3 homolog yes no 2 1.9714E-05 131.12 By MS/MS 1 22661000 22661000 0 1842 2278 2083 4771 4677 4677 8370 1 FSPEGDLCSSPDPK LNYGSPQKFSPEGDLC LCSSPDPKICYVCKKS K F S P K I 0 0 0 2 1 0 1 1 0 0 1 1 0 1 3 3 0 0 0 0 0 0 14 0 1534.661 B1APH0;Q6ZN30;H0Y4J1;F5H586;H0Y6W5 B1APH0 753 766 BNC2 Zinc finger protein basonuclin-2 yes no 2 0.0012348 92.611 By MS/MS By MS/MS 1 1 9981600 4843900 5137700 1843 531 2084 4772;4773 4678;4679 4679 996;997 2 FSPNSSNPIIVSCGWDK SEWVSCVRFSPNSSNP IVSCGWDKLVKVWNLA R F S D K L 0 0 2 1 1 0 0 1 0 2 0 1 0 1 2 4 0 1 0 1 0 0 17 0 1906.8883 D6RFX4;D6R9Z1;D6R9L0;P63244;D6RHH4;D6RAC2;J3KPE3;H0Y8W2;D6REE5;H0Y8R5;D6RBD0;H0YAF8;H0YAM7 D6RFX4 115 131 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.02195 68.262 By MS/MS 1 14187000 14187000 0 1844 728 2085 4774 4680 4680 1 FSPPSPPGK TPTVAKHKFSPPSPPG SPPSPPGKPVVTDITE K F S G K P 0 0 0 0 0 0 0 1 0 0 0 1 0 1 4 2 0 0 0 0 0 0 9 0 912.47052 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42 A0A0A0MRA3 11396 11404 TTN Titin yes no 2 0.0082031 80.916 By MS/MS By matching 1 1 29926000 17154000 12773000 1845 203 2086 4775;4776 4681 4681 361 1 FSSLQHTTLKPPDVTCISK SATKMTDRFSSLQHTT PDVTCISKVRSIQMIV R F S S K V 0 0 0 1 1 1 0 0 1 1 2 2 0 1 2 3 3 0 0 1 0 0 19 1 2158.1092 Q8N6P7 Q8N6P7 113 131 IL22RA1 Interleukin-22 receptor subunit alpha-1 yes yes 3 0.015835 57.148 By MS/MS 1 3403300 3403300 0 1846 2482 2087 4777 4682 4682 5071;7724;7725 0 FSSLSYK TTSETNKRFSSLSYKS RFSSLSYKSREEDPTL R F S Y K S 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 3 0 0 1 0 0 0 7 0 830.41742 Q9NWQ8 Q9NWQ8 294 300 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 0.025292 93.598 By MS/MS 1 0 0 0 1847 2936 2088 4778 4683 4683 6191 1 FSSPIVK STGSPMFKFSSPIVKS KFSSPIVKSTEANVLP K F S V K S 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 2 0 0 0 1 0 0 7 0 776.44324 P49790 P49790 527 533 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.00782 117.81 By MS/MS By matching 1 1 49018000 23258000 25761000 1848 1859 2089 4779;4780 4684 4684 3587 1 FSSRKLSIVSYYK SFISRRRRFSSRKLSI LSIVSYYKSAIFFDPQ R F S Y K S 0 1 0 0 0 0 0 0 0 1 1 2 0 1 0 4 0 0 2 1 0 0 13 2 1576.8613 B5MC85;A0A0A0MSD2;A0A0C4DFM4 B5MC85 127 139 RMDN2 yes no 3 0.028558 40.475 By MS/MS 1 3534300 3534300 0 1849 245 2090 4781 4685 4685 0 FSSSIENSDSPVR NASATDYKFSSSIENS ENSDSPVRSILKSQAW K F S V R S 0 1 1 1 0 0 1 0 0 1 0 0 0 1 1 5 0 0 0 1 0 0 13 0 1423.6579 O95425 O95425 911 923 SVIL Supervillin yes yes 2 0.022876 63.662 By matching By MS/MS 1 1 9574100 5926600 3647500 1850 1596 2091 4782;4783 4686 4686 3025 1 FSSVSSPQPR ASVRSLGRFSSVSSPQ SVSSPQPRSRHPSSSS R F S P R S 0 1 0 0 0 1 0 0 0 0 0 0 0 1 2 4 0 0 0 1 0 0 10 0 1090.5407 Q9P206 Q9P206 337 346 KIAA1522 Uncharacterized protein KIAA1522 yes yes 2 0.0027015 103.08 By MS/MS By MS/MS 1 1 15118000 9182600 5935500 1851 2969 2092 4784;4785 4687;4688 4687 6253;6254 1 FSVALSTVK IPLRKTCKFSVALSTV SVALSTVKGLCLLQV_ K F S V K G 1 0 0 0 0 0 0 0 0 0 1 1 0 1 0 2 1 0 0 2 0 0 9 0 950.54368 C9JRG7 C9JRG7 43 51 GSAP yes yes 1 0.028073 44.447 By MS/MS By matching 1 1 13943000 7259400 6683900 1852 688 2093 4786;4787 4689 4689 1268;1269 0 FSVSPVVR AHNMRVMKFSVSPVVR FSVSPVVRVAVEAKNP K F S V R V 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 2 0 0 0 3 0 0 8 0 889.50215 P13639 P13639 499 506 EEF2 Elongation factor 2 yes yes 2 0.013525 79.489 By MS/MS By MS/MS 1 1 5717100 3610200 2106800 1853 1693 2094 4788;4789 4690;4691 4690 3193 2 FTDKDQQPSGSEGEDDDAEAALK DDMYGPEKFTDKDQQP DDAEAALKKEVGDIKA K F T L K K 3 0 0 5 0 2 3 2 0 0 1 2 0 1 1 2 1 0 0 0 0 0 23 1 2452.0514 H3BNW0;Q9NXG2 H3BNW0 78 100 THUMPD1 THUMP domain-containing protein 1 yes no 3 0.028021 64.349 By MS/MS 1 0 0 0 1854 1237 2095 4790 4692 4692 2311;2312 1 FTDKDQQPSGSEGEDDDAEAALKK DDMYGPEKFTDKDQQP DAEAALKKEVGDIKAS K F T K K E 3 0 0 5 0 2 3 2 0 0 1 3 0 1 1 2 1 0 0 0 0 0 24 2 2580.1463 H3BNW0;Q9NXG2 H3BNW0 78 101 THUMPD1 THUMP domain-containing protein 1 yes no 3;4 2.1837E-06 98.3 By MS/MS By MS/MS 2 2 672650000 332080000 340570000 1855 1237 2096 4791;4792;4793;4794 4693;4694;4695;4696 4695 2311;2312 4 FTENFPETKPQK NWDKARERFTENFPET FPETKPQKDDPGTMPW R F T Q K D 0 0 1 0 0 1 2 0 0 0 0 2 0 2 2 0 2 0 0 0 0 0 12 1 1464.7249 Q8N302 Q8N302 689 700 AGGF1 Angiogenic factor with G patch and FHA domains 1 yes yes 2 0.012308 67.252 By MS/MS 1 8320300 8320300 0 1856 2464 2097 4795 4697 4697 7719 0 FTEYSMTSSVMR WSEETKSRFTEYSMTS SMTSSVMRRNEQLTLH R F T M R R 0 1 0 0 0 0 1 0 0 0 0 0 2 1 0 3 2 0 1 1 0 0 12 0 1437.6268 A0A075B6Q4;Q96GA3 A0A075B6Q4 64 75 LTV1 Protein LTV1 homolog yes no 2 0.00040197 87.568 By MS/MS By MS/MS 1 1 7923100 0 7923100 1857 13 2098;2099 4796;4797 4698;4699 4699 4;5 7974 2 FTGSFDDDPDPHRDPYGEEVDR NNWRYDPRFTGSFDDD PYGEEVDRRSVHSEHS R F T D R R 0 2 0 6 0 0 2 2 1 0 0 0 0 2 3 1 1 0 1 1 0 0 22 1 2565.068 F1T0I1;J3KNL6;O15027;X6RGP5 F1T0I1 1324 1345 SEC16A Protein transport protein Sec16A yes no 3 0.00017543 82.639 By matching By MS/MS 1 1 58055000 29891000 28164000 1858 930 2100 4798;4799 4700 4700 1734 1 FTQAGSEVSALLGR LFIDNIFRFTQAGSEV EVSALLGRIPSAVGYQ R F T G R I 2 1 0 0 0 1 1 2 0 0 2 0 0 1 0 2 1 0 0 1 0 0 14 0 1434.7467 H0YH81;P06576;F8W0P7 H0YH81 248 261 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 2 9.4498E-16 147.58 By MS/MS By MS/MS 1 1 9461100 5643100 3818000 1859 1184 2101 4800;4801 4701;4702;4703 4703 3 FTSGAFLSPSVSVQECRTPR VGGLLQSKFTSGAFLS VQECRTPRAASLMNIP K F T P R A 1 2 0 0 1 1 1 1 0 0 1 0 0 2 2 4 2 0 0 2 0 0 20 1 2225.0899 P52948;H7C3P6 P52948 1053 1072 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 3 0.0026475 67.902 By MS/MS 1 17119000 17119000 0 1860 1893 2102 4802 4704 4704 7486 1 FTSQQGPIKPVSPNSSPFGTDYR TVTQVLSRFTSQQGPI SPFGTDYRNLANTANP R F T Y R N 0 1 1 1 0 2 0 2 0 1 0 1 0 2 4 4 2 0 1 1 0 0 23 1 2509.2238 Q9P2B4 Q9P2B4 512 534 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 3 0.00012077 80.142 By matching By MS/MS 1 1 15806000 6819100 8986800 1861 2976 2103 4803;4804 4705 4705 6265 1 FTSSQTQSPTPPKPPSPSFELGLSSFPPLPGAAGNLK YRKKREEKFTSSQTQS PGAAGNLKTEDLFENR K F T L K T 2 0 1 0 0 2 1 3 0 0 4 2 0 3 9 7 3 0 0 0 0 0 37 1 3765.9254 Q92615;H0Y4V9 Q92615 509 545 LARP4B La-related protein 4B yes no 3 6.1732E-08 72.163 By matching By MS/MS 1 1 86695000 39599000 47097000 1862 2587 2104 4805;4806 4706 4706 5316;5317 1 FVAFSGEGQSLR EEDEAGGRFVAFSGEG SGEGQSLRKKGRKP__ R F V L R K 1 1 0 0 0 1 1 2 0 0 1 0 0 2 0 2 0 0 0 1 0 0 12 0 1296.6463 Q92890 Q92890 290 301 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 0.00058815 108.97 By MS/MS By MS/MS 1 1 35591000 17102000 18489000 1863 2606 2105 4807;4808 4707;4708 4708 5356 2 FVDGLMIHSGDPVNYYVDTAVR GQRAKSMKFVDGLMIH YYVDTAVRHVLLRQGV K F V V R H 1 1 1 3 0 0 0 2 1 1 1 0 1 1 1 1 1 0 2 4 0 0 22 0 2467.1842 E9PL09;P23396;H0YEU2;E9PSF4 E9PL09 140 161 RPS3 40S ribosomal protein S3 yes no 3 0.027676 44.341 By MS/MS 1 2864200 2864200 0 1864 899 2106 4809 4709 4709 339 0 FVLMATPNLSR QYGCPDERFVLMATPN MATPNLSRRNNNRNNS R F V S R R 1 1 1 0 0 0 0 0 0 0 2 0 1 1 1 1 1 0 0 1 0 0 11 0 1247.6696 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3 A0A087X1U1 724 734 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.016759 75.739 By MS/MS 1 3618800 3618800 0 1865 170 2107 4810 4710 4710 72 275 0 FVSEGDGGR CPSRGRKRFVSEGDGG VSEGDGGRLKPESY__ R F V G R L 0 1 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 1 0 0 9 0 922.41446 Q53EL6 Q53EL6 455 463 PDCD4 Programmed cell death protein 4 yes yes 2 0.008576 80.24 By MS/MS By MS/MS 1 1 81552000 45194000 36358000 1866 2199 2108 4811;4812 4711;4712 4711 4399 2 FVVIQNEDLGPASPLDSTFYR RMARDPQRFVVIQNED PLDSTFYRSLLEDDDM R F V Y R S 1 1 1 2 0 1 1 1 0 1 2 0 0 2 2 2 1 0 1 2 0 0 21 0 2367.1747 B4DTR1;P04626;J3QLU9 B4DTR1 710 730 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 yes no 2;3 0.00039394 106.39 By MS/MS 2 19381000 0 19381000 1867 563 2109 4813;4814 4713;4714 4713 1040 2 FWMMGTATQREGNSGGK CHFLREEKFWMMGTAT REGNSGGKIQTELESV K F W G K I 1 1 1 0 0 1 1 4 0 0 0 1 2 1 0 1 2 1 0 0 0 0 17 1 1856.8298 K7EJJ6;K7ELA0;K7ENV6;Q12901 K7EJJ6 65 81 ZNF155 Zinc finger protein 155 yes no 3 0.030487 45.863 By MS/MS By MS/MS 1 2 0 0 0 1868 1370 2110 4815;4816;4817 4715;4716;4717 4716 478;479 3 FYAGGSER EEEEEGQRFYAGGSER FYAGGSERSGQQIVGP R F Y E R S 1 1 0 0 0 0 1 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 8 0 885.39808 Q9UNZ2;F2Z2K0 Q9UNZ2 94 101 NSFL1C NSFL1 cofactor p47 yes no 2 0.010008 84.568 By MS/MS By MS/MS 1 1 20141000 11034000 9106800 1869 3063 2111 4818;4819 4718;4719 4719 8503 0 FYCDYCDTYLTHDSPSVR LFLSPLFRFYCDYCDT THDSPSVRKTHCSGRK R F Y V R K 0 1 0 3 2 0 0 0 1 0 1 0 0 1 1 2 2 0 3 1 0 0 18 0 2297.9358 A0A0A0MRR7;P09234 A0A0A0MRR7 25 42 SNRPC U1 small nuclear ribonucleoprotein C yes no 2;3 0.00051424 81.574 By MS/MS By MS/MS 2 1 34623000 22477000 12145000 1870 228 2112 4820;4821;4822 4720;4721;4722 4722 405 3 FYITGIFQILAESNSSQMCGYR FTLTKGGRFYITGIFQ SSQMCGYRD_______ R F Y Y R D 1 1 1 0 1 2 1 2 0 3 1 0 1 2 0 3 1 0 2 0 0 0 22 0 2584.209 A8MU75 A8MU75 96 117 PMP22 yes yes 3 0.021805 43.598 By MS/MS By matching 1 1 1711900 695040 1016900 1871 496 2113 4823;4824 4723 4723 911 1 FYPESSYK NGKVNDKRFYPESSYK FYPESSYKSTPVPEVV R F Y Y K S 0 0 0 0 0 0 1 0 0 0 0 1 0 1 1 2 0 0 2 0 0 0 8 0 1019.46 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 336 343 OCLN Occludin yes no 2 0.0208 84.916 By matching By MS/MS 1 2 13687000 5412300 8274700 1872 357 2114 4825;4826;4827 4724;4725 4725 640;8028 2 FYQGLPWGVSSLPR AFNNYHSRFYQGLPWG WGVSSLPRYLGLPGLH R F Y P R Y 0 1 0 0 0 1 0 2 0 0 2 0 0 1 2 2 0 1 1 1 0 0 14 0 1605.8304 Q5JTC6 Q5JTC6 858 871 AMER1 APC membrane recruitment protein 1 yes yes 2 0.0015698 106.42 By MS/MS By MS/MS 1 1 10627000 6788100 3838900 1873 2221 2115 4828;4829 4726;4727 4726 4448;4449 2 GAAAAATGQPGTAPAGTPGAPPLAGMAIVK YNLIVIERGAAAAATG LAGMAIVKEEETEAAI R G A V K E 10 0 0 0 0 1 0 6 0 1 1 1 1 0 5 0 3 0 0 1 0 0 30 0 2571.3479 Q13263;M0R0K9 Q13263 525 554 TRIM28 Transcription intermediary factor 1-beta yes no 2;3 5.5036E-10 110.53 By MS/MS By MS/MS 2 3 86605000 35905000 50700000 1874 2054 2116;2117 4830;4831;4832;4833;4834 4728;4729;4730;4731;4732 4728 817 7553 5 GAAAADLLSSSPESQHGGTQSPGGGQPLLQPTK EPPPCLRRGAAAADLL QPLLQPTKVDAAEGRR R G A T K V 4 0 0 1 0 4 1 6 1 0 4 1 0 0 4 5 2 0 0 0 0 0 33 0 3143.5483 Q9H3S7 Q9H3S7 1113 1145 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 3 0.00039493 59.094 By MS/MS 1 12311000 0 12311000 1875 2829 2118 4835 4733 4733 5935 1 GAADEVEVEPPEPPGPVASR ILEVATARGAADEVEV PPGPVASRDNSNSDSE R G A S R D 3 1 0 1 0 0 4 2 0 0 0 0 0 0 5 1 0 0 0 3 0 0 20 0 2001.9643 Q8NCF5 Q8NCF5 66 85 NFATC2IP NFATC2-interacting protein yes yes 2;3 1.0384E-32 163.79 By MS/MS By MS/MS 2 1 42858000 22819000 20040000 1876 2502 2119 4836;4837;4838 4734;4735;4736 4734 5106 2 GAAEEAELEDSDDEEKPVK FISAGLKKGAAEEAEL DDEEKPVKQDDFPKDF K G A V K Q 3 0 0 3 0 0 6 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 19 1 2059.907 Q9UBB9;F6XM96 Q9UBB9 88 106 TFIP11 Tuftelin-interacting protein 11 yes no 2;3 1.1077E-43 178.52 By MS/MS By MS/MS 2 2 145910000 76069000 69839000 1877 2988 2120 4839;4840;4841;4842 4737;4738;4739 4739 6287 3 GAAEEAELEDSDDEEKPVKQDDFPK FISAGLKKGAAEEAEL VKQDDFPKDFGPRKLK K G A P K D 3 0 0 5 0 1 6 1 0 0 1 3 0 1 2 1 0 0 0 1 0 0 25 2 2790.2356 Q9UBB9;F6XM96 Q9UBB9 88 112 TFIP11 Tuftelin-interacting protein 11 yes no 3 4.7445E-14 135.36 By matching By MS/MS 1 1 152190000 102890000 49298000 1878 2988 2121 4843;4844 4740;4741 4741 6287 2 GAAEGSGGDGEGPPGEAGAEK ATPGSEPKGAAEGSGG PGEAGAEKSSSAVAPQ K G A E K S 4 0 0 1 0 0 4 8 0 0 0 1 0 0 2 1 0 0 0 0 0 0 21 0 1798.7606 A0A087WWK9;P31277 A0A087WWK9 59 79 HOXD11 Homeobox protein Hox-D11 yes no 2 0.0011212 78.708 By MS/MS By MS/MS 1 1 13324000 5692700 7631400 1879 92 2122 4845;4846 4742;4743 4742 168 2 GAASPTQAALPR CGAALGARGAASPTQA PTQAALPRRQQLLLEF R G A P R R 4 1 0 0 0 1 0 1 0 0 1 0 0 0 2 1 1 0 0 0 0 0 12 0 1138.6095 Q96JH8 Q96JH8 390 401 RADIL Ras-associating and dilute domain-containing protein yes yes 2 0.013132 70.54 By MS/MS By matching 1 1 12744000 6408300 6335500 1880 2672 2123 4847;4848 4744 4744 5504 1 GAASPVLQEDHCDSLPSVLQVEEK RLAHARRKGAASPVLQ SVLQVEEKTEEVGEGR K G A E K T 2 0 0 2 1 2 3 1 1 0 3 1 0 0 2 3 0 0 0 3 0 0 24 0 2607.2486 Q8N9B5 Q8N9B5 710 733 JMY Junction-mediating and -regulatory protein yes yes 3 0.00019705 75.416 By matching By MS/MS 1 1 40325000 24797000 15528000 1881 2488 2124 4849;4850 4745 4745 5076 1 GAASTLVPGVSETSASPGSPSVR VRRRRQQRGAASTLVP SPGSPSVRSMSGPESS R G A V R S 3 1 0 0 0 0 1 3 0 0 1 0 0 0 3 6 2 0 0 3 0 0 23 0 2113.0651 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2513 2535 SRCAP Helicase SRCAP yes no 2;3 9.1898E-06 111.09 By MS/MS By MS/MS 3 4 99716000 43248000 56468000 1882 239 2125;2126 4851;4852;4853;4854;4855;4856;4857 4746;4747;4748;4749;4750;4751;4752 4750 418;419;420 7 GADDAADADTAIINAEGGQNNSEEKKEYFI TYFTHEAKGADDAADA EEKKEYFI________ K G A F I - 6 0 3 4 0 1 4 3 0 3 0 2 0 1 0 1 1 0 1 0 0 0 30 2 3155.4167 A0A087X105;A0A087WZW4;A0A087X1W8;A0A0A0MTJ8;A0A087WZR6;X5DQS5;Q9BY67 A0A087X105 344 373 CADM1 Cell adhesion molecule 1 yes no 3 1.0612E-09 94.301 By MS/MS By MS/MS 1 1 84990000 49245000 35745000 1883 144 2127 4858;4859 4753;4754 4753 235;7997 2 GADFLVTEVENGGSLGSK ISLQVKQKGADFLVTE NGGSLGSKKGVNLPGA K G A S K K 1 0 1 1 0 0 2 4 0 0 2 1 0 1 0 2 1 0 0 2 0 0 18 0 1778.8687 P14618;B4DNK4;H3BTN5;H3BQ34 P14618 189 206 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 2 0.0009864 106.54 By MS/MS By MS/MS 2 2 23700000 11443000 12257000 1884 1700 2128;2129 4860;4861;4862;4863 4755;4756;4757;4758 4758 73 4 GADNDGSGSESGYTTPK ITNGYMGKGADNDGSG ESGYTTPKKRKARRNS K G A P K K 1 0 1 2 0 0 1 4 0 0 0 1 0 0 1 3 2 0 1 0 0 0 17 0 1641.6754 Q7Z417 Q7Z417 206 222 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.019577 86.016 By MS/MS By MS/MS 1 1 31080000 11880000 19201000 1885 2380 2130 4864;4865 4759;4760 4760 4833 1 GADTAPTLAPEALPSQGEVER EPGTEEERGADTAPTL PSQGEVEREGESPAAG R G A E R E 4 1 0 1 0 1 3 2 0 0 2 0 0 0 3 1 2 0 0 1 0 0 21 0 2108.0386 C9JFV4;Q8IZL8 C9JFV4 1069 1089 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 2 0.00030373 90.718 By matching By MS/MS 1 1 17395000 8848100 8547200 1886 662 2131 4866;4867 4761 4761 1229 1 GAEAFGDSEEDGEDVFEVEK EDNDAAARGAEAFGDS EDVFEVEKILDMKTEG R G A E K I 2 0 0 3 0 0 6 3 0 0 0 1 0 2 0 1 0 0 0 2 0 0 20 0 2157.8862 Q99549 Q99549 44 63 MPHOSPH8 M-phase phosphoprotein 8 yes yes 2;3 1.4685E-86 207.81 By MS/MS By MS/MS 2 2 247160000 118920000 128240000 1887 2724 2132 4868;4869;4870;4871 4762;4763;4764;4765;4766;4767 4765 5653 6 GAEASAASEEEAGPQATEPSTPSGPESGPTPASAEQNE ESQEPQAKGAEASAAS PASAEQNE________ K G A N E - 8 0 1 0 0 2 8 4 0 0 0 0 0 0 6 6 3 0 0 0 0 0 38 0 3624.5459 P49006 P49006 158 195 MARCKSL1 MARCKS-related protein yes yes 3;4 3.1891E-28 134.36 By MS/MS By MS/MS 3 4 366540000 166090000 200450000 1888 1849 2133 4872;4873;4874;4875;4876;4877;4878 4768;4769;4770;4771;4772;4773;4774;4775;4776;4777;4778 4774 3552;3553;3554 11 GAEETSWSGEER CSQAAGTKGAEETSWS TSWSGEERAAKVPSTP K G A E R A 1 1 0 0 0 0 4 2 0 0 0 0 0 0 0 2 1 1 0 0 0 0 12 0 1336.5531 Q9H7N4 Q9H7N4 958 969 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.000315 115.24 By MS/MS By MS/MS 1 1 49391000 28624000 20767000 1889 2849 2134 4879;4880 4779;4780 4779 5997 2 GAGDGSDEEVDGKADGAEAKPAE VPRRMARKGAGDGSDE GAEAKPAE________ K G A A E - 5 0 0 4 0 0 4 5 0 0 0 2 0 0 1 1 0 0 0 1 0 0 23 2 2173.9247 P35579 P35579 1938 1960 MYH9 Myosin-9 yes yes 2 0.00025273 89.631 By MS/MS By matching 1 1 33489000 18762000 14727000 1890 1795 2135 4881;4882 4781 4781 3390 1 GAGGSPVGVEEGLVNVGTGQK SDKDRGLKGAGGSPVG VNVGTGQKLPTSGADP K G A Q K L 1 0 1 0 0 1 2 7 0 0 1 1 0 0 1 1 1 0 0 4 0 0 21 0 1910.9698 Q7Z5J4 Q7Z5J4 1370 1390 RAI1 Retinoic acid-induced protein 1 yes yes 2 3.1444E-17 146.18 By MS/MS By MS/MS 1 1 16487000 6947900 9539000 1891 2389 2136 4883;4884 4782;4783 4783 4859 2 GAILLQDKKLMAMFLEYNK SYFEYLVKGAILLQDK AMFLEYNKAIRNYTRF K G A N K A 2 0 1 1 0 1 1 1 0 1 4 3 2 1 0 0 0 0 1 0 0 0 19 2 2225.1952 Q9BV94 Q9BV94 267 285 EDEM2 ER degradation-enhancing alpha-mannosidase-like protein 2 yes yes 2 0.031826 44.829 By MS/MS 1 0 0 0 1892 2756 2137 4885 4784 4784 1095;1096 1 GAILSEEELAAMSPTAAAVAK LLSATKRKGAILSEEE PTAAAVAKIVKPGMKL K G A A K I 7 0 0 0 0 0 3 1 0 1 2 1 1 0 1 2 1 0 0 1 0 0 21 0 2029.0402 P12270 P12270 367 387 TPR Nucleoprotein TPR yes yes 2;3 1.0104E-146 233.46 By MS/MS By MS/MS 4 3 114500000 57947000 56551000 1893 1686 2138;2139 4886;4887;4888;4889;4890;4891;4892 4785;4786;4787;4788;4789;4790;4791 4785 624 3183;7388 7 GAIQFVTHYQHSSTQRRIR TPIPQGGRGAIQFVTH SSTQRRIRVTTIARNW R G A I R V 1 3 0 0 0 3 0 1 2 2 0 0 0 1 0 2 2 0 1 1 0 0 19 2 2284.1937 Q15437 Q15437 479 497 SEC23B Protein transport protein Sec23B yes yes 3 0.0215 48.883 By MS/MS 1 76084000 76084000 0 1894 2140 2140 4893 4792 4792 4246;4247 0 GAKEEHGGLIRSPR RRSKPLTRGAKEEHGG GGLIRSPRHEKKKKVR R G A P R H 1 2 0 0 0 0 2 3 1 1 1 1 0 0 1 1 0 0 0 0 0 0 14 2 1505.8063 P26368 P26368 68 81 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 3 0.027875 61.48 By MS/MS By matching 1 1 177680000 99327000 78349000 1895 1766 2141 4894;4895 4793 4793 3331 1 GALQNIIPASTGAAK GKLWRDGRGALQNIIP PASTGAAKAVGKVIPE R G A A K A 4 0 1 0 0 1 0 2 0 2 1 1 0 0 1 1 1 0 0 0 0 0 15 0 1410.7831 P04406;E7EUT5 P04406 201 215 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.00072163 103.66 By MS/MS By MS/MS 1 1 11829000 7049900 4779100 1896 1635 2142 4896;4897 4794;4795 4795 3085;7365 2 GALSSSLR GAGDGLKRGALSSSLR GALSSSLRDLSDAGKR R G A L R D 1 1 0 0 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 0 0 0 8 0 789.43447 Q5JU85 Q5JU85 1128 1135 IQSEC2 IQ motif and SEC7 domain-containing protein 2 yes yes 2 0.022557 70.908 By MS/MS 1 1830800 0 1830800 1897 2224 2143 4898 4796 4796 4453 1 GALTGGYYDTR EGDQVSHRGALTGGYY TGGYYDTRKSRLELQK R G A T R K 1 1 0 1 0 0 0 3 0 0 1 0 0 0 0 0 2 0 2 0 0 0 11 0 1172.5462 Q9UQE7 Q9UQE7 662 672 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.02702 41.283 By MS/MS 1 0 0 0 1898 3078 2144 4899 4797 4797 1 GANILLTDNGHVK GKMHRDIKGANILLTD LTDNGHVKLADFGVSA K G A V K L 1 0 2 1 0 0 0 2 1 1 2 1 0 0 0 0 1 0 0 1 0 0 13 0 1350.7256 F5H5A3;Q8IVH8 F5H5A3 76 88 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 yes no 2 0.0053322 66.962 By matching By MS/MS 1 1 31613000 14122000 17491000 1899 974 2145 4900;4901 4798 4798 40;41 7139 1 GANSDLPEEVTVLVNK VLVPPIIKGANSDLPE EVTVLVNKSALIECLS K G A N K S 1 0 2 1 0 0 2 1 0 0 2 1 0 0 1 1 1 0 0 3 0 0 16 0 1683.8679 Q96RW7 Q96RW7 2873 2888 HMCN1 Hemicentin-1 yes yes 2 0.014751 75.376 By matching By MS/MS 1 1 17496000 8550100 8946300 1900 2707 2146 4902;4903 4799 4799 7807 1 GAPANVSSSDLTGR KVSMRLHRGAPANVSS SSSDLTGRQEVSRIPA R G A G R Q 2 1 1 1 0 0 0 2 0 0 1 0 0 0 1 3 1 0 0 1 0 0 14 0 1330.6477 H0Y5S9;H0Y682;P49674 H0Y5S9 86 99 CSNK1E Casein kinase I isoform epsilon yes no 2 0.0039301 82.578 By MS/MS By MS/MS 1 1 22469000 9505200 12964000 1901 1130 2147 4904;4905 4800;4801 4801 2150 2 GAPPGSPEPPALLAAPLAAGACPGGR PTPSPAARGAPPGSPE AGACPGGRSIPSGVSG R G A G R S 7 1 0 0 1 0 1 5 0 0 3 0 0 0 7 1 0 0 0 0 0 0 26 0 2351.2056 Q9Y4B5 Q9Y4B5 258 283 MTCL1 Microtubule cross-linking factor 1 yes yes 3 0.0033194 58.952 By MS/MS By MS/MS 2 1 7662100 3913100 3749000 1902 3118 2148 4906;4907;4908 4802;4803 4803 6680 2 GAPSITSVTPR QAKDDINRGAPSITSV SITSVTPRGLCRDEED R G A P R G 1 1 0 0 0 0 0 1 0 1 0 0 0 0 2 2 2 0 0 1 0 0 11 0 1084.5877 E7EQA9;Q92844;H7C3L4 E7EQA9 205 215 TANK TRAF family member-associated NF-kappa-B activator yes no 2 0.0079951 67.385 By MS/MS By matching 1 1 92672000 48477000 44195000 1903 805 2149 4909;4910 4804 4804 1437;1438;7078 1 GAPSSPATGVLPSPQGK SLSRYFRRGAPSSPAT VLPSPQGKSTSLSKAS R G A G K S 2 0 0 0 0 1 0 3 0 0 1 1 0 0 4 3 1 0 0 1 0 0 17 0 1549.81 Q5SRE5 Q5SRE5 1705 1721 NUP188 Nucleoporin NUP188 homolog yes yes 2 0.00016128 118.76 By MS/MS By MS/MS 2 2 95860000 49283000 46577000 1904 2231 2150;2151 4911;4912;4913;4914 4805;4806;4807;4808;4809;4810;4811;4812;4813;4814;4815 4810 4462;4463;4464 11 GAPVNISSSDLTGR KVSMRLHRGAPVNISS SSSDLTGRQDTSRMST R G A G R Q 1 1 1 1 0 0 0 2 0 1 1 0 0 0 1 3 1 0 0 1 0 0 14 0 1372.6947 J3KRM8;H7BYT1;P48730 J3KRM8 13 26 CSNK1D Casein kinase I isoform delta yes no 2 0.027662 53.924 By MS/MS 1 0 0 0 1905 1264 2152 4915 4816 4816 2347;2348 1 GASGSIFSK SGHSQGRRGASGSIFS ASGSIFSKFTSKFVRR R G A S K F 1 0 0 0 0 0 0 2 0 1 0 1 0 1 0 3 0 0 0 0 0 0 9 0 852.43413 E7ETY4;E9PC69;Q7KZI7 E7ETY4 549 557 MARK2 Serine/threonine-protein kinase MARK2 yes no 2 0.0063324 84.31 By MS/MS 1 3577500 3577500 0 1906 823 2153 4916 4817;4818 4818 1518 2 GASQAGMTGYGMPR GLQMGTNRGASQAGMT MTGYGMPRQIL_____ R G A P R Q 2 1 0 0 0 1 0 4 0 0 0 0 2 0 1 1 1 0 1 0 0 0 14 0 1382.6071 P37802;C9J5W6;Q9UI15 P37802 183 196 TAGLN2;TAGLN3 Transgelin-2;Transgelin-3 yes no 2 0.020066 62.166 By MS/MS 1 0 0 0 1907 1805 2154 4917 4819 4819 684 1 GASVIPTSR G A S R 1 1 0 0 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 1 0 0 9 0 886.48723 REV__H7C3N7 yes yes 2 0.0074621 82.261 By MS/MS By MS/MS 2 1 269510000 128280000 141240000 + 1908 3189 2155 4918;4919;4920 4820;4821;4822 4821 6786 3 GAVAAEGASDTEREEPTESQGLAAR SSAMSKLRGAVAAEGA ESQGLAARLRRPSPPE R G A A R L 6 2 0 1 0 1 5 3 0 0 1 0 0 0 1 2 2 0 0 1 0 0 25 1 2501.163 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 907 931 PHRF1 PHD and RING finger domain-containing protein 1 yes no 3 0.000554 69.292 By MS/MS By MS/MS 1 1 238540000 116780000 121760000 1909 371 2156 4921;4922 4823;4824;4825 4825 685 3 GAWSNVLR EGGKAFFKGAWSNVLR GAWSNVLRGMGGAFVL K G A L R G 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 0 8 0 901.477 P12236;P05141;P12235 P12236 273 280 SLC25A6;SLC25A5;SLC25A4 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1 yes no 2 0.018751 100.07 By MS/MS By MS/MS 1 1 7819100 4215500 3603600 1910 1639 2157 4923;4924 4826;4827 4826 2 GCTATLGNFAK DDCYTSARGCTATLGN ATLGNFAKATFDAISK R G C A K A 2 0 1 0 1 0 0 2 0 0 1 1 0 1 0 0 2 0 0 0 0 0 11 0 1138.5441 H0YEN5;E9PQD7;P15880 H0YEN5 130 140 RPS2 40S ribosomal protein S2 yes no 2 0.0069284 85.862 By matching By MS/MS 1 1 10353000 7406400 2946400 1911 927 2158 4925;4926 4828 4828 1 GDAASSPAPAASVGSSQGGAR TFEEALARGDAASSPA GSSQGGARKRQVDADL R G D A R K 6 1 0 1 0 1 0 4 0 0 0 0 0 0 2 5 0 0 0 1 0 0 21 0 1799.8398 E7EXA6;A0A0D9SF58;Q8WVB6;F8WCC1 E7EXA6 59 79 CHTF18 Chromosome transmission fidelity protein 18 homolog yes no 2 0.00053504 86.258 By MS/MS By MS/MS 2 2 46890000 30070000 16820000 1912 342 2159 4927;4928;4929;4930 4829;4830;4831 4831 603;604;605 3 GDADMYDLPK FSDLNSTRGDADMYDL ADMYDLPKKEDALLYQ R G D P K K 1 0 0 3 0 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 0 0 10 0 1123.4856 P50402;Q5HY57 P50402 69 78 EMD Emerin yes no 2 0.013804 57.532 By matching By MS/MS 1 1 86539000 46051000 40488000 1913 1867 2160 4931;4932 4832 4832 727 8288 1 GDADMYDLPKKEDALLYQSK FSDLNSTRGDADMYDL DALLYQSKGYNDDYYE R G D S K G 2 0 0 4 0 1 1 1 0 0 3 3 1 0 1 1 0 0 2 0 0 0 20 2 2299.1042 P50402;Q5HY57 P50402 69 88 EMD Emerin yes no 3 0.0004329 78.78 By matching By MS/MS 1 1 61512000 32313000 29199000 1914 1867 2161 4933;4934 4833 4833 727 8288 1 GDDDEESDEEAVK DEQTSNTKGDDDEESD ESDEEAVKKTNKCVLV K G D V K K 1 0 0 4 0 0 4 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 13 0 1436.5427 O43395 O43395 613 625 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 2 0.0041852 82.705 By MS/MS 1 1850000 0 1850000 1915 1498 2162 4935 4834 4834 2797 1 GDDDEESDEEAVKK DEQTSNTKGDDDEESD SDEEAVKKTNKCVLVW K G D K K T 1 0 0 4 0 0 4 1 0 0 0 2 0 0 0 1 0 0 0 1 0 0 14 1 1564.6377 O43395 O43395 613 626 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 2 0.0015228 103.3 By MS/MS 1 6955700 0 6955700 1916 1498 2163 4936 4835 4835 2797 1 GDDGIFDDNFIEER FLRQLPFRGDDGIFDD DDNFIEERKQGLEQFI R G D E R K 0 1 1 4 0 0 2 2 0 2 0 0 0 2 0 0 0 0 0 0 0 0 14 0 1640.6954 O60493 O60493 105 118 SNX3 Sorting nexin-3 yes yes 2 0.012309 78.548 By MS/MS 1 5139700 0 5139700 1917 1518 2164 4937 4836 4836 1 GDEELDSLIK RHLQLAIRGDEELDSL EELDSLIKATIAGGGM R G D I K A 0 0 0 2 0 0 2 1 0 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1117.5503 C9J0D1;Q71UI9;P0C0S5;C9J386 C9J0D1 93 102 H2AFV;H2AFZ Histone H2A;Histone H2A.V;Histone H2A.Z yes no 2 0.0012483 131.62 By MS/MS By MS/MS 1 1 18793000 8086900 10707000 1918 623 2165 4938;4939 4837;4838 4838 2 GDFSYIGNLMTK PVVNEEHRGDFSYIGN YIGNLMTKEFIGQQLI R G D T K E 0 0 1 1 0 0 0 2 0 1 1 1 1 1 0 1 1 0 1 0 0 0 12 0 1344.6384 Q9BPX3 Q9BPX3 387 398 NCAPG Condensin complex subunit 3 yes yes 2 0.0060523 65.809 By MS/MS 1 6537800 6537800 0 1919 2739 2166 4940 4839 4839 1088 5682 1 GDHPLTPGSHYA LQDQLDHRGDHPLTPG LTPGSHYA________ R G D Y A - 1 0 0 1 0 0 0 2 2 0 1 0 0 0 2 1 1 0 1 0 0 0 12 0 1250.568 A0A0B4J2E8;Q96D31 A0A0B4J2E8 227 238 ORAI1 Calcium release-activated calcium channel protein 1 yes no 2 0.013176 61.691 By matching By MS/MS 1 1 20448000 13205000 7243000 1920 292 2167 4941;4942 4840 4840 8022 0 GDLGIEIPAEK SDGIMVARGDLGIEIP GIEIPAEKVFLAQKMM R G D E K V 1 0 0 1 0 0 2 2 0 2 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1140.6027 P14618;B4DNK4;H3BTN5;H3BR70;P30613 P14618 295 305 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR yes no 2 6.9763E-06 142.98 By MS/MS By MS/MS 1 1 25018000 11097000 13920000 1921 1700 2168 4943;4944 4841;4842 4842 2 GDLSDVEEEEEEEMDVDEATGAVK PDLLFAQRGDLSDVEE DEATGAVKKHNGVGGS R G D V K K 2 0 0 4 0 0 8 2 0 0 1 1 1 0 0 1 1 0 0 3 0 0 24 0 2624.0807 Q96ST3 Q96ST3 829 852 SIN3A Paired amphipathic helix protein Sin3a yes yes 2;3 4.5617E-77 199.75 By MS/MS By MS/MS 5 4 750260000 428960000 321310000 1922 2712 2169;2170 4945;4946;4947;4948;4949;4950;4951;4952;4953 4843;4844;4845;4846;4847;4848;4849;4850;4851;4852 4845 1078 5612 10 GDLSDVEEEEEEEMDVDEATGAVKK PDLLFAQRGDLSDVEE EATGAVKKHNGVGGSP R G D K K H 2 0 0 4 0 0 8 2 0 0 1 2 1 0 0 1 1 0 0 3 0 0 25 1 2752.1757 Q96ST3 Q96ST3 829 853 SIN3A Paired amphipathic helix protein Sin3a yes yes 2;3 2.0643E-06 104.5 By MS/MS By MS/MS 3 3 221700000 118030000 103670000 1923 2712 2171;2172 4954;4955;4956;4957;4958;4959 4853;4854;4855;4856;4857;4858 4855 1078 5612 6 GDNITLLQSVSN QLGRIMLKGDNITLLQ TLLQSVSN________ K G D S N - 0 0 2 1 0 1 0 1 0 1 2 0 0 0 0 2 1 0 0 1 0 0 12 0 1259.6357 A6NHK2;P62304 A6NHK2 41 52 SNRPE Small nuclear ribonucleoprotein E yes no 2 0.0042107 88.155 By MS/MS By MS/MS 1 1 10971000 4349500 6621200 1924 470 2173 4960;4961 4859;4860 4860 2 GDNVLINTFSGLLK HIVHRDIKGDNVLINT NTFSGLLKISDFGTSK K G D L K I 0 0 2 1 0 0 0 2 0 1 3 1 0 1 0 1 1 0 0 1 0 0 14 0 1489.814 H0Y894;O95382 H0Y894 498 511 MAP3K6 Mitogen-activated protein kinase kinase kinase 6 yes no 2 0.013414 65.232 By MS/MS 1 0 0 0 1925 1147 2174 4962 4861 4861 2180;7202 1 GDPPRLSPDPVAGSAVSQELR LMPPPPERGDPPRLSP SAVSQELREGDPVSLS R G D L R E 2 2 0 2 0 1 1 2 0 0 2 0 0 0 4 3 0 0 0 2 0 0 21 1 2147.0971 E9PMG4;Q9BUR4;E9PMR3 E9PMG4 48 68 WRAP53 Telomerase Cajal body protein 1 yes no 3 0.0018893 66.122 By MS/MS By MS/MS 1 1 36829000 22429000 14399000 1926 913 2175 4963;4964 4862;4863;4864 4864 1696 3 GDPQQQSITHIAIPQEAYNAVHVSGSPTALAAVK PVYSAQPRGDPQQQSI PTALAAVKLEDDKEKM R G D V K L 6 0 1 1 0 4 1 2 2 3 1 1 0 0 3 3 2 0 1 3 0 0 34 0 3497.7903 Q2TAL8 Q2TAL8 320 353 QRICH1 Glutamine-rich protein 1 yes yes 3 1.4286E-05 68.412 By matching By MS/MS 1 1 127230000 62276000 64956000 1927 2181 2176 4965;4966 4865 4865 4337 1 GDQPAASGDSDDDEPPPLPR FLLYKIVRGDQPAASG DEPPPLPRLKRRDFTP R G D P R L 2 1 0 5 0 1 1 2 0 0 1 0 0 0 5 2 0 0 0 0 0 0 20 0 2034.8767 O00264 O00264 48 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2;3 9.2233E-33 164.74 By MS/MS By MS/MS 2 3 913490000 436680000 476800000 1928 1430 2177;2178 4967;4968;4969;4970;4971 4866;4867;4868;4869;4870;4871;4872;4873;4874;4875;4876;4877;4878;4879;4880;4881;4882;4883;4884;4885;4886 4878 2627;2628 20 GDQVLNFSDAEDLIDDSK QTVQPLPKGDQVLNFS EDLIDDSKLKDMRDEV K G D S K L 1 0 1 5 0 1 1 1 0 1 2 1 0 1 0 2 0 0 0 1 0 0 18 0 1979.896 F8W126;Q96EZ8 F8W126 262 279 MCRS1 Microspherule protein 1 yes no 2 3.9812E-65 197.41 By MS/MS By MS/MS 1 1 53288000 30256000 23032000 1929 1030 2179 4972;4973 4887;4888;4889 4889 1930 3 GDQVLNFSDAEDLIDDSKLK QTVQPLPKGDQVLNFS LIDDSKLKDMRDEVLE K G D L K D 1 0 1 5 0 1 1 1 0 1 3 2 0 1 0 2 0 0 0 1 0 0 20 1 2221.075 F8W126;Q96EZ8 F8W126 262 281 MCRS1 Microspherule protein 1 yes no 3 0.00022334 89.353 By MS/MS 1 9190000 0 9190000 1930 1030 2180 4974 4890 4890 1930 1 GDREEEVERPVSSPGDPEQK GDLELDERGDREEEVE SPGDPEQKKLDPLEGL R G D Q K K 0 2 0 2 0 1 5 2 0 0 0 1 0 0 3 2 0 0 0 2 0 0 20 2 2239.0353 O43149 O43149 2432 2451 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 3 0.019176 58.864 By MS/MS By matching 1 1 28727000 15667000 13060000 1931 1487 2181 4975;4976 4891 4891 2778;2779 1 GDRILEVNHVNVEGATHK ADRAGVRKGDRILEVN NVEGATHKQVVDLIRA K G D H K Q 1 1 2 1 0 0 2 2 2 1 1 1 0 0 0 0 1 0 0 3 0 0 18 1 1987.0235 Q96L92 Q96L92 98 115 SNX27 Sorting nexin-27 yes yes 2 0.021586 62.891 By MS/MS 1 0 0 0 1932 2682 2182 4977 4892 4892 1 GDSEEASGAEEEVGTVAAAATAGK GEKAISVRGDSEEASG AAAATAGKEMDSNEKT R G D G K E 7 0 0 1 0 0 5 4 0 0 0 1 0 0 0 2 2 0 0 2 0 0 24 0 2205.9873 H0YFS7;E7EW59;Q9Y467 H0YFS7 659 682 SALL2 Sal-like protein 2 yes no 2;3 1.7406E-26 154.08 By MS/MS By MS/MS 2 2 44477000 23970000 20507000 1933 833 2183 4978;4979;4980;4981 4893;4894;4895 4893 1554;1555 3 GDSESEEDEDLEVPVPSR PDRVADAKGDSESEED LEVPVPSRFNRRVSVC K G D S R F 0 1 0 3 0 0 5 1 0 0 1 0 0 0 2 3 0 0 0 2 0 0 18 0 1987.8494 P13861 P13861 76 93 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 2;3 3.3519E-16 151.31 By MS/MS By MS/MS 2 3 335300000 142920000 192390000 1934 1697 2184 4982;4983;4984;4985;4986 4896;4897;4898;4899 4897 3198;3199 4 GDSIEEILADSEDEEDNEEEER EEEPAQGKGDSIEEIL EDNEEEERSRGKEQRK K G D E R S 1 1 1 4 0 0 9 1 0 2 1 0 0 0 0 2 0 0 0 0 0 0 22 0 2551.0205 Q5JTH9 Q5JTH9 1070 1091 RRP12 RRP12-like protein yes yes 3 4.1486E-137 210.26 By MS/MS By MS/MS 2 1 0 0 0 1935 2223 2185 4987;4988;4989 4900;4901;4902 4902 4452 3 GDSLKEPTSIAESSR SSSAKLSRGDSLKEPT TSIAESSRHPSYRSEP R G D S R H 1 1 0 1 0 0 2 1 0 1 1 1 0 0 1 4 1 0 0 0 0 0 15 1 1575.774 Q9C0B5;H0YEF4 Q9C0B5 378 392 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase yes no 3 0.011654 63.682 By MS/MS By matching 1 1 31412000 11086000 20325000 1936 2790 2186 4990;4991 4903 4903 5801 0 GDTVSASPCSAPLAR VGQPGGPRGDTVSASP PCSAPLARASSLEDLV R G D A R A 3 1 0 1 1 0 0 1 0 0 1 0 0 0 2 3 1 0 0 1 0 0 15 0 1487.7038 Q15477 Q15477 239 253 SKIV2L Helicase SKI2W yes yes 2 0.00056266 100.23 By matching By MS/MS 1 1 49348000 18584000 30763000 1937 2143 2187 4992;4993 4904 4904 4254 1 GDVTAEEAAGASPAK SQSSKAPRGDVTAEEA AAGASPAKANGQENGH R G D A K A 5 0 0 1 0 0 2 2 0 0 0 1 0 0 1 1 1 0 0 1 0 0 15 0 1372.647 P49006 P49006 11 25 MARCKSL1 MARCKS-related protein yes yes 1;2 4.7247E-112 231.41 By MS/MS By MS/MS 5 4 843970000 473170000 370800000 1938 1849 2188 4994;4995;4996;4997;4998;4999;5000;5001;5002 4905;4906;4907;4908;4909;4910;4911;4912;4913;4914;4915;4916;4917;4918 4913 3555 12 GDVTAEEAAGASPAKANGQENGHVK SQSSKAPRGDVTAEEA GQENGHVKSNGDLSPK R G D V K S 6 0 2 1 0 1 3 4 1 0 0 2 0 0 1 1 1 0 0 2 0 0 25 1 2407.1364 P49006 P49006 11 35 MARCKSL1 MARCKS-related protein yes yes 3;4 2.9892E-07 107.57 By MS/MS By MS/MS 5 6 361860000 203150000 158720000 1939 1849 2189;2190 5003;5004;5005;5006;5007;5008;5009;5010;5011;5012;5013 4919;4920;4921;4922;4923;4924;4925;4926;4927;4928 4923 88;89;156 3555 10 GEAAAERPGEAAVASSPSK QFSKTAAKGEAAAERP AVASSPSKANGQENGH K G E S K A 6 1 0 0 0 0 3 2 0 0 0 1 0 0 2 3 0 0 0 1 0 0 19 1 1783.8701 P29966 P29966 12 30 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 0.00028213 98.727 By MS/MS By MS/MS 2 2 448740000 204310000 244430000 1940 1776 2191 5014;5015;5016;5017 4929;4930;4931;4932 4929 3357;3358;3359 4 GEAAAERPGEAAVASSPSKANGQENGHVK QFSKTAAKGEAAAERP GQENGHVKVNGDASPA K G E V K V 7 1 2 0 0 1 4 4 1 0 0 2 0 0 2 3 0 0 0 2 0 0 29 2 2818.3594 P29966 P29966 12 40 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.0085049 51.463 By matching By MS/MS 1 1 23315000 10998000 12317000 1941 1776 2192 5018;5019 4933 4933 3357;3358;3359 1 GEAAPGPAPPAPEATPPPASAAGK HQAAVRPKGEAAPGPA PPASAAGKDWAFINTN K G E G K D 8 0 0 0 0 0 2 3 0 0 0 1 0 0 8 1 1 0 0 0 0 0 24 0 2108.0538 Q9NSI2;C9JJU7 Q9NSI2 20 43 FAM207A Protein FAM207A yes no 2;3 4.1367E-06 91.166 By MS/MS By MS/MS 2 2 41636000 25653000 15983000 1942 2914 2193 5020;5021;5022;5023 4934;4935;4936;4937;4938 4938 7878 5 GEAEQSEEEADEEDKAEDAR DMDEAIEKGEAEQSEE EDKAEDAREEEYEPEK K G E A R E 4 1 0 3 0 1 8 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 20 1 2235.8887 P46821 P46821 1011 1030 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.00024572 88.385 By MS/MS By MS/MS 1 1 44340000 21764000 22576000 1943 1840 2194 5024;5025 4939;4940 4940 3497 2 GEATVSFDDPPSAK DKDTGKPKGEATVSFD FDDPPSAKAAIDWFDG K G E A K A 2 0 0 2 0 0 1 1 0 0 0 1 0 1 2 2 1 0 0 1 0 0 14 0 1419.6518 A0A075B7D9;H3BPE7;P35637;Q92804 A0A075B7D9 193 206 TAF15;FUS RNA-binding protein FUS;TATA-binding protein-associated factor 2N yes no 2 0.031575 68.536 By matching By MS/MS 1 1 10066000 5467100 4599300 1944 23 2195 5026;5027 4941 4941 1 GEAVLRPGLDAEPELSPEEQR SGEGAGSKGEAVLRPG ELSPEEQRVLERKLKK K G E Q R V 2 2 0 1 0 1 5 2 0 0 3 0 0 0 3 1 0 0 0 1 0 0 21 1 2291.1394 C9JQV0;Q9BRJ6 C9JQV0 44 64 C7orf50 Uncharacterized protein C7orf50 yes no 3 0.00056745 75.912 By matching By MS/MS 1 1 23660000 12813000 10847000 1945 685 2196 5028;5029 4942 4942 1262 1 GEDAEESLEEEEALDPLGIMR ________________ LDPLGIMRSKKPKKHP K G E M R S 2 1 0 2 0 0 7 2 0 1 3 0 1 0 1 1 0 0 0 0 0 0 21 0 2331.0424 H7BZZ1;F6TR53;Q53T59 H7BZZ1 7 27 HS1BP3 HCLS1-binding protein 3 yes no 2;3 4.2073E-191 251.74 By MS/MS By MS/MS 3 2 141190000 84824000 56364000 1946 995 2197;2198 5030;5031;5032;5033;5034 4943;4944;4945;4946;4947 4947 362 1870 5 GEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK AEGRDSSKGEDSAEET EQGPILTKHGKNPVME K G E T K H 10 0 0 2 0 1 6 2 0 1 1 2 0 1 6 4 4 0 0 5 0 0 45 1 4434.1966 Q12906 Q12906 479 523 ILF3 Interleukin enhancer-binding factor 3 yes yes 4 1.7416E-16 82.012 By MS/MS By MS/MS 1 1 139590000 62855000 76737000 1947 2033 2199 5035;5036 4948;4949;4950 4950 3979;7543 3 GEDSWDSPVTDYR SDSSFDFKGEDSWDSP DSPVTDYRDMKSDSVA K G E Y R D 0 1 0 3 0 0 1 1 0 0 0 0 0 0 1 2 1 1 1 1 0 0 13 0 1525.6321 Q6UB99 Q6UB99 854 866 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 2 0.00029671 116.9 By MS/MS By MS/MS 2 1 15427000 11230000 4197200 1948 2337 2200;2201 5037;5038;5039 4951;4952 4951 4719;4720 2 GEEGSDDDETENGPKPK KKRRRHPKGEEGSDDD TENGPKPKKRRPPKAE K G E P K K 0 0 1 3 0 0 4 3 0 0 0 2 0 0 2 1 1 0 0 0 0 0 17 1 1802.7442 Q6PD62 Q6PD62 966 982 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 2;3 0.0086615 90.498 By MS/MS By MS/MS 3 3 24308000 12030000 12278000 1949 2327 2202 5040;5041;5042;5043;5044;5045 4953;4954;4955;4956;4957 4953 4690 0 GEFSASPMLK RSPIRQDRGEFSASPM FSASPMLKSGMSPEQS R G E L K S 1 0 0 0 0 0 1 1 0 0 1 1 1 1 1 2 0 0 0 0 0 0 10 0 1065.5165 Q9UQ35 Q9UQ35 1119 1128 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.00087099 104.06 By MS/MS By MS/MS 2 2 1069700000 600470000 469240000 1950 3074 2203;2204 5046;5047;5048;5049 4958;4959;4960;4961;4962;4963;4964 4960 1223 6521 7 GEGDAPFSEPGTTSTQRPSSPETATK PSPASGRRGEGDAPFS SSPETATKQPSSPYED R G E T K Q 2 1 0 1 0 1 3 3 0 0 0 1 0 1 4 4 5 0 0 0 0 0 26 1 2634.2045 Q9UQ35;I3L4D8;I3L182;I3L1I8;A0A087X1W1 Q9UQ35 304 329 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 1.073E-06 101.6 By MS/MS By matching 2 1 367700000 304530000 63168000 1951 3074 2205;2206 5050;5051;5052 4965;4966 4965 6522;6523;6524;7923;7924 2 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSR SGDFLDLKGEGDIHEN APAPVPSRRNPPGGKS K G E S R R 4 1 1 3 0 1 4 4 1 1 2 1 0 0 9 4 1 0 0 5 0 0 42 1 4212.0975 Q9UK76 Q9UK76 100 141 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 4 0.00010903 57.826 By MS/MS 1 75943000 0 75943000 1952 3020 2207 5053 4967 4967 6360 1 GEGPGEAGGPLTPR EGEDKKVRGEGPGEAG AGGPLTPRRVSSDLQH R G E P R R 1 1 0 0 0 0 2 5 0 0 1 0 0 0 3 0 1 0 0 0 0 0 14 0 1293.6313 P50548 P50548 515 528 ERF ETS domain-containing transcription factor ERF yes yes 2 0.002874 93.106 By matching By MS/MS 1 1 37456000 22335000 15121000 1953 1868 2208 5054;5055 4968 4968 7481 1 GEIGGLSLSPSPER EARPARARGEIGGLSL SLSPSPERRKPPPPDP R G E E R R 0 1 0 0 0 0 2 3 0 1 2 0 0 0 2 3 0 0 0 0 0 0 14 0 1397.7151 A0A096LNX8;Q96GP6 A0A096LNX8 643 656 SCARF2 Scavenger receptor class F member 2 yes no 2 0.0069718 89.358 By MS/MS By MS/MS 2 2 17380000 9299500 8080900 1954 180 2209;2210 5056;5057;5058;5059 4969;4970;4971 4969 301;302 2 GEKCFSERDFSPLQTQTFNR KYEHHTGKGEKCFSER LQTQTFNRETTIKCYS K G E N R E 0 2 1 1 1 2 2 1 0 0 1 1 0 3 1 2 2 0 0 0 0 0 20 2 2446.1336 Q6P4F7 Q6P4F7 665 684 ARHGAP11A Rho GTPase-activating protein 11A yes yes 2 0.030028 63.181 By MS/MS 1 0 0 0 1955 2320 2211 5060 4972 4972 4679 1 GELESPKPLVTPGSTLTLLTR KPAAPFPRGELESPKP STLTLLTRAEAGS___ R G E T R A 0 1 0 0 0 0 2 2 0 0 5 1 0 0 3 2 4 0 0 1 0 0 21 1 2208.2365 H0YKN5;Q9GZN2 H0YKN5 149 169 TGIF2 Homeobox protein TGIF2 yes no 3 0.0024478 63.726 By matching By MS/MS 1 1 11080000 6419700 4660600 1956 1205 2212 5061;5062 4973 4973 2248 1 GELSPSFLNPPLPPSIDDR ATEPRPHRGELSPSFL LPPSIDDRDLSTEEVR R G E D R D 0 1 1 2 0 0 1 1 0 1 3 0 0 1 5 3 0 0 0 0 0 0 19 0 2050.0371 E9PGC8;P78559 E9PGC8 2684 2702 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.00016336 99.044 By MS/MS By MS/MS 1 1 11209000 11209000 0 1957 872 2213 5063;5064 4974;4975;4976 4975 1606 3 GEPAAAAAPEAGASPVEK ASPSAAEKGEPAAAAA AGASPVEKEAPAEGEA K G E E K E 7 0 0 0 0 0 3 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 18 0 1621.7948 P29966 P29966 88 105 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 7.4163E-25 162.92 By MS/MS By MS/MS 2 2 347380000 184990000 162390000 1958 1776 2214 5065;5066;5067;5068 4977;4978;4979;4980;4981;4982;4983 4982 3360 7 GEPEGGSQDQKGQASSPTPEPGVGAGDLPGPTSAPVPSGSQSGGR ILERDTQRGEPEGGSQ SGSQSGGRGSPVSPRR R G E G R G 3 1 0 2 0 4 3 11 0 0 1 1 0 0 8 7 2 0 0 2 0 0 45 1 4170.9326 Q14676 Q14676 949 993 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.030839 29.385 By MS/MS 1 13752000 13752000 0 1959 2098 2215 5069 4984 4984 0 GEPNVSYICSR GSAKQLVRGEPNVSYI NVSYICSRYYRAPELI R G E S R Y 0 1 1 0 1 0 1 1 0 1 0 0 0 0 1 2 0 0 1 1 0 0 11 0 1280.5819 P49841;A8MT37;P49840 P49841 210 220 GSK3B;GSK3A Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha no no 2 0.00012841 117.71 By MS/MS By MS/MS 1 1 163740000 90165000 73579000 1960 1862;1861 2216 5070;5071 4985;4986;4987;4988;4989;4990;4991;4992 4986 3615 8 GEQVSQNGLPAEQGSPR QQQWDTSKGEQVSQNG PAEQGSPRMAETVDTS K G E P R M 1 1 1 0 0 3 2 3 0 0 1 0 0 0 2 2 0 0 0 1 0 0 17 0 1752.8391 A0A087WUZ3;Q01082 A0A087WUZ3 2126 2142 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.0061637 73.057 By MS/MS By matching 1 1 25195000 12810000 12385000 1961 67 2217 5072;5073 4993 4993 122 1 GESAADSDGWDSAPSDLR SGSSSPLRGESAADSD DSAPSDLRTIQTFVKK R G E L R T 3 1 0 4 0 0 1 2 0 0 1 0 0 0 1 4 0 1 0 0 0 0 18 0 1834.7606 I3L0Y2;I3L4Q4;Q9BUL5;A0A087WVQ2 I3L0Y2 72 89 PHF23 PHD finger protein 23 yes no 2 1.8105E-10 142.26 By MS/MS By MS/MS 1 1 20255000 8994800 11260000 1962 1303 2218 5074;5075 4994;4995;4996 4994 2420 3 GESAGYMEPYEAQR DLKSKAGKGESAGYME MEPYEAQRIMTEFQRQ K G E Q R I 2 1 0 0 0 1 3 2 0 0 0 0 1 0 1 1 0 0 2 0 0 0 14 0 1586.6671 Q15464 Q15464 263 276 SHB SH2 domain-containing adapter protein B yes yes 2 0.025768 54.005 By MS/MS 1 2179800 0 2179800 1963 2142 2219 5076 4997 4997 0 GESDEPAPQVQPESPETVSPK ETASLVFRGESDEPAP SPETVSPKGSEGLPPP R G E P K G 1 0 0 1 0 2 4 1 0 0 0 1 0 0 5 3 1 0 0 2 0 0 21 0 2207.023 A0A1B0GTL5 A0A1B0GTL5 853 873 yes yes 2;3 3.873E-08 134.58 By MS/MS By MS/MS 2 2 52610000 21361000 31248000 1964 410 2220 5077;5078;5079;5080 4998;4999;5000;5001 5001 754 4 GEVPGGSAHYGGPSPEKK SEPLPGPRGEVPGGSA GGPSPEKKAKSSSGGS R G E K K A 1 0 0 0 0 0 2 5 1 0 0 2 0 0 3 2 0 0 1 1 0 0 18 1 1752.8431 J3KS37;O94762 J3KS37 54 71 RECQL5 ATP-dependent DNA helicase Q5 yes no 3 0.019211 50.053 By MS/MS 1 8217600 8217600 0 1965 1337 2221 5081 5002 5002 2477 1 GEVPPKETPK PSQGAEAKGEVPPKET VPPKETPKKKKKFSFK K G E P K K 0 0 0 0 0 0 2 1 0 0 0 2 0 0 3 0 1 0 0 1 0 0 10 1 1080.5815 P49006 P49006 78 87 MARCKSL1 MARCKS-related protein yes yes 2;3 0.00024703 114.24 By MS/MS By MS/MS 7 8 103890000 27897000 75994000 1966 1849 2222 5082;5083;5084;5085;5086;5087;5088;5089;5090;5091;5092;5093;5094;5095;5096 5003;5004;5005;5006;5007;5008;5009;5010;5011;5012;5013;5014;5015;5016;5017 5003 7462 11 GEVPPKETPKK PSQGAEAKGEVPPKET PPKETPKKKKKFSFKK K G E K K K 0 0 0 0 0 0 2 1 0 0 0 3 0 0 3 0 1 0 0 1 0 0 11 2 1208.6765 P49006 P49006 78 88 MARCKSL1 MARCKS-related protein yes yes 3 0.00087097 107.93 By MS/MS By MS/MS 1 2 120650000 14950000 105700000 1967 1849 2223 5097;5098;5099 5018;5019;5020;5021 5020 7462 4 GFAFVQYVNER IVGCSVHKGFAFVQYV FVQYVNERNARAAVAG K G F E R N 1 1 1 0 0 1 1 1 0 0 0 0 0 2 0 0 0 0 1 2 0 0 11 0 1328.6513 G3V2Q1;P07910;G3V576;G3V555;G3V575;G3V4M8;B4DSU6;G3V4C1;B2R5W2;G3V4W0;B4DY08;G3V5X6;G3V3K6;G3V251 G3V4C1 51 61 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 no no 2 2.653E-05 133.13 By MS/MS By MS/MS 1 1 11407000 6349900 5057400 1968 1069;1079 2224 5100;5101 5022;5023 5022 2 GFAFVTFDDHDSVDK DRGSGKKRGFAFVTFD DDHDSVDKIVIQKYHT R G F D K I 1 0 0 4 0 0 0 1 1 0 0 1 0 3 0 1 1 0 0 2 0 0 15 0 1698.7526 F8W6I7;P09651;F8VTQ5;F8VZ49;Q32P51;H0YH80 F8W6I7 147 161 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 3 0.014397 93.228 By MS/MS By matching 1 1 13553000 8316600 5236300 1969 1033 2225 5102;5103 5024 5024 1 GFAFVTFESPADAK DRETNKSRGFAFVTFE FESPADAKDAARDMNG R G F A K D 3 0 0 1 0 0 1 1 0 0 0 1 0 3 1 1 1 0 0 1 0 0 14 0 1485.714 P38159;H0Y6E7;H3BT71;Q96E39;H3BR27;A0A1B0GUK8;O75526;Q8N7X1 P38159 50 63 RBMX;RBMXL1;RBMXL2;RBMXL3 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3 yes no 2 0.016943 73.9 By matching By MS/MS 2 2 20891000 11138000 9752600 1970 1806 2226;2227 5104;5105;5106;5107 5025;5026 5026 3413 2 GFEEEHKDSDDDSSDDEQEK NSAAPKKKGFEEEHKD SSDDEQEKKPEAPKLS K G F E K K 0 0 0 6 0 1 5 1 1 0 0 2 0 1 0 3 0 0 0 0 0 0 20 1 2339.8786 E9PPJ0;Q13435 E9PPJ0 406 425 SF3B2 Splicing factor 3B subunit 2 yes no 3 0.02577 54.355 By MS/MS 1 0 0 0 1971 922 2228 5108 5027 5027 1713;1714;1715 1 GFEGSCSQKESEEGNPVR SEEGCPKRGFEGSCSQ SEEGNPVRGSEEDSPK R G F V R G 0 1 1 0 1 1 4 3 0 0 0 1 0 1 1 3 0 0 0 1 0 0 18 1 1995.8592 O43719 O43719 475 492 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.0039961 80.508 By MS/MS By MS/MS 1 1 17772000 9928400 7843700 1972 1505 2229 5109;5110 5028;5029 5028 2820 2 GFGDGYNGYGGGPGGGNFGGSPGYGGGR SDGYGSGRGFGDGYNG SPGYGGGRGGYGGGGP R G F G R G 0 1 2 1 0 0 0 16 0 0 0 0 0 2 2 1 0 0 3 0 0 0 28 0 2494.0323 P22626 P22626 239 266 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2;3 3.62E-19 142.2 By MS/MS By MS/MS 8 8 2230700000 1276700000 954010000 1973 1749 2230;2231 5111;5112;5113;5114;5115;5116;5117;5118;5119;5120;5121;5122;5123;5124;5125;5126 5030;5031;5032;5033;5034;5035;5036;5037;5038;5039;5040;5041;5042 5039 76;77 3297 13 GFGEYSRSPTF DEEIEKMKGFGEYSRS EYSRSPTF________ K G F T F - 0 1 0 0 0 0 1 2 0 0 0 0 0 2 1 2 1 0 1 0 0 0 11 1 1246.5619 D6REL5;Q6UWZ7 D6REL5 350 360 FAM175A BRCA1-A complex subunit Abraxas yes no 2 0.0039486 92.781 By MS/MS By MS/MS 1 1 59848000 35928000 23920000 1974 760 2232 5127;5128 5043;5044;5045 5045 1369 3 GFGFVDFNSEEDAK DRETGSSKGFGFVDFN FNSEEDAKAAKEAMED K G F A K A 1 0 1 2 0 0 2 2 0 0 0 1 0 3 0 1 0 0 0 1 0 0 14 0 1560.6733 P19338;H7BY16 P19338 611 624 NCL Nucleolin yes no 2 5.3873E-16 146.2 By MS/MS By MS/MS 2 2 47679000 26205000 21474000 1975 1732 2233;2234 5129;5130;5131;5132 5046;5047;5048;5049 5048 3261 4 GFGFVTFDDHDPVDK DRQSGKKRGFGFVTFD DDHDPVDKIVLQKYHT R G F D K I 0 0 0 4 0 0 0 2 1 0 0 1 0 3 1 0 1 0 0 2 0 0 15 0 1694.7577 P22626;A0A087WUI2 P22626 154 168 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2;3 0.00081869 120.03 By MS/MS By MS/MS 2 2 46065000 26927000 19138000 1976 1749 2235 5133;5134;5135;5136 5050;5051;5052 5052 3 GFGSSAPEGLEPDSMASAASALHLLSPR IASEALSRGFGSSAPE ALHLLSPRPRPGPELG R G F P R P 5 1 0 1 0 0 2 3 1 0 4 0 1 1 3 6 0 0 0 0 0 0 28 0 2754.3283 Q6P2E9 Q6P2E9 755 782 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 3 0.00012076 69.548 By MS/MS By MS/MS 1 1 25246000 12245000 13001000 1977 2317 2236 5137;5138 5053;5054;5055;5056 5054 929 4676 4 GFGSSAPEGLEPDSMASAASALHLLSPRPR IASEALSRGFGSSAPE HLLSPRPRPGPELGPQ R G F P R P 5 2 0 1 0 0 2 3 1 0 4 0 1 1 4 6 0 0 0 0 0 0 30 1 3007.4822 Q6P2E9 Q6P2E9 755 784 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 4 0.011378 41.609 By MS/MS 1 8485200 8485200 0 1978 2317 2237 5139 5057 5057 929 4676 1 GFGSVEELCTNSSLGMEK DSIATLPKGFGSVEEL NSSLGMEKSFATKNEA K G F E K S 0 0 1 0 1 0 3 3 0 0 2 1 1 1 0 3 1 0 0 1 0 0 18 0 1943.8605 B5MDQ0;Q2NKX8 B5MDQ0 694 711 ERCC6L DNA excision repair protein ERCC-6-like yes no 2 9.7923E-05 123.14 By MS/MS 1 6398700 0 6398700 1979 582 2238 5140 5058 5058 1062 1 GFIDQNLSPTK TSTNAEVRGFIDQNLS DQNLSPTKGNISFVAF R G F T K G 0 0 1 1 0 1 0 1 0 1 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1218.6245 F8WAY9;C9JTZ9;Q14188 F8WAY9 17 27 TFDP2 Transcription factor Dp-2 yes no 2 0.021847 84.365 By MS/MS By matching 1 1 11296000 6591400 4704500 1980 695 2239 5141;5142 5059 5059 1289 0 GFSDSGGGPPAK RGSLLLRRGFSDSGGG SGGGPPAKQRDLEGAV R G F A K Q 1 0 0 1 0 0 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 12 0 1075.4934 Q9H307;G3V5F0;G3V579 Q9H307 64 75 PNN Pinin yes no 2 0.00083572 100.38 By MS/MS By MS/MS 1 1 199560000 106380000 93185000 1981 2826 2240 5143;5144 5060;5061;5062;5063 5063 5926 4 GFSLEELR HTKVRAGRGFSLEELR GFSLEELRVAGIHKKV R G F L R V 0 1 0 0 0 0 2 1 0 0 2 0 0 1 0 1 0 0 0 0 0 0 8 0 949.4869 P26373;J3QSB4 P26373 75 82 RPL13 60S ribosomal protein L13 yes no 2 0.005712 120.62 By MS/MS By MS/MS 2 2 16092000 6681700 9410700 1982 1767 2241;2242 5145;5146;5147;5148 5064;5065;5066;5067 5064 3332 4 GFSQYGVSGSPTK SAVPHQGRGFSQYGVS GVSGSPTKSKVTSCPG R G F T K S 0 0 0 0 0 1 0 3 0 0 0 1 0 1 1 3 1 0 1 1 0 0 13 0 1313.6252 Q9NXC5 Q9NXC5 757 769 MIOS WD repeat-containing protein mio yes yes 2 0.00023689 118.71 By matching By MS/MS 1 1 83028000 49443000 33585000 1983 2940 2243 5149;5150 5068 5068 6196;7885 1 GFSVVADTPELQR EFEKNKGKGFSVVADT ADTPELQRIKKTQDQI K G F Q R I 1 1 0 1 0 1 1 1 0 0 1 0 0 1 1 1 1 0 0 2 0 0 13 0 1417.7201 C9J9W2;Q14847 C9J9W2 61 73 LASP1 LIM and SH3 domain protein 1 yes no 2 0.0025494 89.136 By MS/MS By matching 1 1 11290000 6898500 4391100 1984 648 2244 5151;5152 5069 5069 7023 0 GFTECEMTKSSPLK KNSSTEPKGFTECEMT MTKSSPLKITLFLEED K G F L K I 0 0 0 0 1 0 2 1 0 0 1 2 1 1 1 2 2 0 0 0 0 0 14 1 1613.7429 Q9NQW6 Q9NQW6 508 521 ANLN Actin-binding protein anillin yes yes 2;3 0.0011954 95.483 By MS/MS By MS/MS 4 3 67126000 42020000 25106000 1985 2900 2245;2246 5153;5154;5155;5156;5157;5158;5159 5070;5071;5072;5073;5074 5071 1148 6109;7873 5 GGAEQFMEETER KTCTFILRGGAEQFME QFMEETERSLHDAIMI R G G E R S 1 1 0 0 0 1 4 2 0 0 0 0 1 1 0 0 1 0 0 0 0 0 12 0 1382.5772 Q99832 Q99832 376 387 CCT7 T-complex protein 1 subunit eta yes yes 2 0.0002927 121.5 By MS/MS By MS/MS 1 1 6205300 3351500 2853800 1986 2734 2247 5160;5161 5075;5076 5075 1086 2 GGAPDPSPGATATPGAPAQPSSPDAR RGRKPRVRGGAPDPSP QPSSPDARRNGQEKHF R G G A R R 6 1 0 2 0 1 0 4 0 0 0 0 0 0 7 3 2 0 0 0 0 0 26 0 2329.0935 O95365 O95365 505 530 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 2;3 5.2738E-07 118.23 By MS/MS By MS/MS 2 2 114990000 51045000 63950000 1987 1591 2248 5162;5163;5164;5165 5077;5078;5079;5080;5081 5078 3015;3016 5 GGAPDPSPGATATPGAPAQPSSPDARR RGRKPRVRGGAPDPSP PSSPDARRNGQEKHFK R G G R R N 6 2 0 2 0 1 0 4 0 0 0 0 0 0 7 3 2 0 0 0 0 0 27 1 2485.1946 O95365 O95365 505 531 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 3 0.00010979 74.251 By MS/MS By MS/MS 1 1 13294000 5530200 7763700 1988 1591 2249 5166;5167 5082;5083;5084 5084 3015;3016 3 GGATPLSYPSPGPQPPGPSWTATFDPVPTDAPTSPR EGIGCAARGGATPLSY TDAPTSPRVSGEEELH R G G P R V 3 1 0 2 0 1 0 4 0 0 1 0 0 1 11 4 5 1 1 1 0 0 36 0 3602.7318 Q9UPN7 Q9UPN7 693 728 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 3 7.4425E-10 85.441 By MS/MS 1 34228000 0 34228000 1989 3065 2250 5168 5085 5085 6476;7917 1 GGDAKSPVLQEK GTQERLSRGGDAKSPV KSPVLQEKGLQASRAP R G G E K G 1 0 0 1 0 1 1 2 0 0 1 2 0 0 1 1 0 0 0 1 0 0 12 1 1227.6459 A6NFI3 A6NFI3 107 118 ZNF316 Zinc finger protein 316 yes yes 2 0.021592 72.289 By MS/MS By matching 1 1 21249000 11684000 9564500 1990 466 2251 5169;5170 5086 5086 861 1 GGDSIGETPTPGASK AETPRTDRGGDSIGET TPTPGASKRKSRWDET R G G S K R 1 0 0 1 0 0 1 4 0 1 0 1 0 0 2 2 2 0 0 0 0 0 15 0 1372.647 O75533 O75533 319 333 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0037431 79.804 By MS/MS By MS/MS 1 2 22799000 7064900 15734000 1991 1549 2252 5171;5172;5173 5087;5088;5089 5088 2926;7338;7339 2 GGDSIGETPTPGASKR AETPRTDRGGDSIGET PTPGASKRKSRWDETP R G G K R K 1 1 0 1 0 0 1 4 0 1 0 1 0 0 2 2 2 0 0 0 0 0 16 1 1528.7481 O75533 O75533 319 334 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.012611 52.112 By matching By MS/MS 1 1 16670000 9109800 7560200 1992 1549 2253 5174;5175 5090 5090 2926;7338;7339 1 GGDVFGDTSFLSNHGGSSGSTHR RHTMHVGRGGDVFGDT GSSGSTHRSPRSFLAK R G G H R S 0 1 1 2 0 0 0 6 2 0 1 0 0 2 0 5 2 0 0 1 0 0 23 0 2277.9999 Q00587 Q00587 54 76 CDC42EP1 Cdc42 effector protein 1 yes yes 3 0.0018939 60.621 By matching By MS/MS 1 1 21311000 11409000 9902300 1993 1974 2254 5176;5177 5091 5091 3778 1 GGDVSPSPYSSSSWR SRHSSYERGGDVSPSP PYSSSSWRRSRSPYSP R G G W R R 0 1 0 1 0 0 0 2 0 0 0 0 0 0 2 6 0 1 1 1 0 0 15 0 1567.6903 Q14004 Q14004 379 393 CDK13 Cyclin-dependent kinase 13 yes yes 2 0.00023272 115.26 By MS/MS By MS/MS 1 1 82285000 40435000 41850000 1994 2080 2255 5178;5179 5092;5093 5092 4099 2 GGEFDEFVNDDTDDDLPISK GGGRRSKKGGEFDEFV DDDLPISKKKKRRKGS K G G S K K 0 0 1 6 0 0 2 2 0 1 1 1 0 2 1 1 1 0 0 1 0 0 20 0 2226.9441 Q6PD62 Q6PD62 914 933 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 2;3 1.5114E-135 229.37 By MS/MS By MS/MS 2 2 446230000 239150000 207080000 1995 2327 2256 5180;5181;5182;5183 5094;5095;5096;5097 5094 7666 4 GGEFDEFVNDDTDDDLPISKK GGGRRSKKGGEFDEFV DDLPISKKKKRRKGSG K G G K K K 0 0 1 6 0 0 2 2 0 1 1 2 0 2 1 1 1 0 0 1 0 0 21 1 2355.039 Q6PD62 Q6PD62 914 934 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 3 0.0019502 76.161 By matching By MS/MS 1 1 23812000 12178000 11634000 1996 2327 2257 5184;5185 5098 5098 7666 1 GGETPGSEQWK LLTPDAQKGGETPGSE TPGSEQWKFQELSQPR K G G W K F 0 0 0 0 0 1 2 3 0 0 0 1 0 0 1 1 1 1 0 0 0 0 11 0 1174.5255 O60271;A0A087X2D8;D6RHI8 O60271 223 233 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2 0.0051403 97.957 By MS/MS By MS/MS 1 1 36429000 22878000 13552000 1997 1514 2258 5186;5187 5099;5100 5100 7328 2 GGFFSSFMK TCFTRDRKGGFFSSFM GFFSSFMKKRNAPTPP K G G M K K 0 0 0 0 0 0 0 2 0 0 0 1 1 3 0 2 0 0 0 0 0 0 9 0 1006.4582 P42684 P42684 650 658 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0023653 102.06 By MS/MS By MS/MS 2 1 11305000 4912900 6392100 1998 1828 2259;2260 5188;5189;5190 5101;5102;5103 5101 692 3446;3447 3 GGGGGQDNGLEGLGNDSR ERGRDEARGGGGGQDN EGLGNDSRDMYMESEG R G G S R D 0 1 2 2 0 1 1 8 0 0 2 0 0 0 0 1 0 0 0 0 0 0 18 0 1658.7245 P08621 P08621 394 411 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 2 0.00023944 118.84 By MS/MS By MS/MS 2 2 20777000 7398900 13378000 1999 1661 2261;2262 5191;5192;5193;5194 5104;5105;5106;5107 5104 71 3130 4 GGGGYTCQSGSGWDEFTK RVRRASSKGGGGYTCQ SGWDEFTKHVTSECLG K G G T K H 0 0 0 1 1 1 1 6 0 0 0 1 0 1 0 2 2 1 1 0 0 0 18 0 1892.7635 P15924 P15924 168 185 DSP Desmoplakin yes yes 2 0.00017185 121.03 By MS/MS By MS/MS 1 1 29859000 14547000 15312000 2000 1708 2263 5195;5196 5108;5109 5109 3208;8230 2 GGGSAAAAAAAAASGGGVSPDNSIEHSDYR EGVAGPEKGGGSAAAA SIEHSDYRSKLAQIRH K G G Y R S 9 1 1 2 0 0 1 6 1 1 0 0 0 0 1 5 0 0 1 1 0 0 30 0 2673.2015 P40425 P40425 133 162 PBX2 Pre-B-cell leukemia transcription factor 2 yes yes 3 3.752E-05 72.052 By MS/MS By MS/MS 1 1 43139000 19204000 23935000 2001 1812 2264 5197;5198 5110;5111 5111 3419 2 GGGTPDANSLAPPGK FPPNSSGRGGGTPDAN NSLAPPGKAGGGSGPQ R G G G K A 2 0 1 1 0 0 0 4 0 0 1 1 0 0 3 1 1 0 0 0 0 0 15 0 1337.6575 Q5T171;Q9BRQ0 Q5T171 262 276 PYGO2 Pygopus homolog 2 yes no 2 0.0011703 98.421 By matching By MS/MS 1 1 63411000 35600000 27811000 2002 2237 2265 5199;5200 5112 5112 7642 1 GGIDNPAITSDQELDDK LSPVETWKGGIDNPAI SDQELDDKKMKKKTHK K G G D K K 1 0 1 4 0 1 1 2 0 2 1 1 0 0 1 1 1 0 0 0 0 0 17 0 1786.8221 A0A0A0MSK6;Q13017;H0YK04 A0A0A0MSK6 1208 1224 ARHGAP5 Rho GTPase-activating protein 5 yes no 2 1.6807E-06 129.36 By MS/MS By MS/MS 1 1 11898000 5270000 6628000 2003 252 2266 5201;5202 5113;5114 5114 441 2 GGIDNPAITSDQELDDKK LSPVETWKGGIDNPAI DQELDDKKMKKKTHKV K G G K K M 1 0 1 4 0 1 1 2 0 2 1 2 0 0 1 1 1 0 0 0 0 0 18 1 1914.9171 A0A0A0MSK6;Q13017;H0YK04 A0A0A0MSK6 1208 1225 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 8.5412E-05 101.53 By MS/MS By MS/MS 2 1 58875000 34298000 24577000 2004 252 2267 5203;5204;5205 5115;5116 5115 441 2 GGIVDEGALLR VRVVNCARGGIVDEGA VDEGALLRALQSGQCA R G G L R A 1 1 0 1 0 0 1 3 0 1 2 0 0 0 0 0 0 0 0 1 0 0 11 0 1098.6033 Q5SZU1;O43175 Q5SZU1 203 213 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.014645 78.149 By matching By MS/MS 1 1 8085700 3969000 4116700 2005 1489 2268 5206;5207 5117 5117 1 GGKADQQEERR ELEEDMYKGGKADQQE ADQQEERRRQKQMKVL K G G R R R 1 2 0 1 0 2 2 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 11 2 1272.6171 G3V529;Q9GZR7;F5GYL3;A0A087WXU8 G3V529 727 737 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 0.02541 55.461 By MS/MS 1 0 0 0 2006 1084 2269 5208 5118 5118 1 GGLETVHSNASRNVVHDEGYPQEHCSR G G S R 1 2 2 1 1 1 3 3 3 0 1 0 0 0 1 3 1 0 1 3 0 0 27 1 3034.37 REV__M0R1W8 yes yes 3 0.025342 41.83 By matching By MS/MS 1 2 34822000 14560000 20262000 + 2007 3195 2270 5209;5210;5211 5119 5119 6793 1 GGLLTSEEDSGFSTSPK KLNRCAIKGGLLTSEE SGFSTSPKDNSLPKKK K G G P K D 0 0 0 1 0 0 2 3 0 0 2 1 0 1 1 4 2 0 0 0 0 0 17 0 1710.7948 Q9UQR1 Q9UQR1 292 308 ZNF148 Zinc finger protein 148 yes yes 2 0.0018812 86.005 By MS/MS By MS/MS 1 1 28498000 14254000 14244000 2008 3080 2271 5212;5213 5120;5121 5121 6618;6619;7939 2 GGLNTILKNVIDCQLSR NPEVVALRGGLNTILK VIDCQLSRINEALITT R G G S R I 0 1 2 1 1 1 0 2 0 2 3 1 0 0 0 1 1 0 0 1 0 0 17 1 1900.02 Q6R327;D6R9S6 Q6R327 206 222 RICTOR Rapamycin-insensitive companion of mTOR yes no 2 0.02641 53.967 By matching By MS/MS 1 1 6632100 3942800 2689400 2009 2333 2272 5214;5215 5122 5122 0 GGLNTPLHESDFSGVTPQR TNVDTPLKGGLNTPLH FSGVTPQRQVVQTPNT K G G Q R Q 0 1 1 1 0 1 1 3 1 0 2 0 0 1 2 2 2 0 0 1 0 0 19 0 2010.9759 Q99459 Q99459 381 399 CDC5L Cell division cycle 5-like protein yes yes 3 0.0048618 60.517 By MS/MS By MS/MS 2 2 30560000 18196000 12364000 2010 2721 2273;2274 5216;5217;5218;5219 5123;5124;5125;5126 5124 5646;7815 4 GGLSPANDTGAK EEDNSYNRGGLSPAND PANDTGAKKKKKKQKK R G G A K K 2 0 1 1 0 0 0 3 0 0 1 1 0 0 1 1 1 0 0 0 0 0 12 0 1086.5306 K7EN42;B7Z8J4;P30419 K7EN42 43 54 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes no 2 0.0087632 75.483 By MS/MS By MS/MS 2 2 252260000 135120000 117140000 2011 593 2275;2276 5220;5221;5222;5223 5127;5128 5128 1082 2 GGLVSDAYGEDDFSR ________________ YGEDDFSRLGGDEDGY K G G S R L 1 1 0 3 0 0 1 3 0 0 1 0 0 1 0 2 0 0 1 1 0 0 15 0 1586.6849 J3KS14;F5H478;J3KRU5;X6R3T8;J3QLH3;J3QQJ0;Q9UHR5 J3KS14 4 18 SAP30BP SAP30-binding protein yes no 2 0.00069687 109.55 By MS/MS By MS/MS 1 1 21757000 10687000 11069000 2012 971 2277 5224;5225 5129;5130;5131 5131 1826 3 GGNANATVTKVLK IKNAMLIKGGNANATV ATVTKVLKDVEKYYKT K G G L K D 2 0 2 0 0 0 0 2 0 0 1 2 0 0 0 0 2 0 0 2 0 0 13 1 1271.7197 U3KQN5;Q5VXM9;Q9H7B2;Q5VXN0 U3KQN5 38 50 RPF2 Ribosome production factor 2 homolog yes no 2 0.030836 42.243 By MS/MS 1 0 0 0 2013 2279 2278 5226 5132 5132 1 GGNLPPVSPNDSGAK IIIKASAKGGNLPPVS SPNDSGAKIASNPLER K G G A K I 1 0 2 1 0 0 0 3 0 0 1 1 0 0 3 2 0 0 0 1 0 0 15 0 1408.6947 Q9UK61;A0A087X0F1 Q9UK61 1096 1110 FAM208A Protein FAM208A yes no 2 0.013801 68.536 By MS/MS By matching 1 1 13744000 7362900 6380700 2014 3019 2279 5227;5228 5133 5133 6356 1 GGPADPVDYLPAAPR RQYASLPRGGPADPVD DYLPAAPRGLYKEREL R G G P R G 3 1 0 2 0 0 0 2 0 0 1 0 0 0 4 0 0 0 1 1 0 0 15 0 1494.7467 A0A087WZG6;A0A087X1S9;Q8TEW8;A0A087WYL6 A0A087WZG6 913 927 PARD3B Partitioning defective 3 homolog B yes no 2 0.00094165 99.752 By MS/MS By MS/MS 1 1 8857200 4578700 4278500 2015 141 2280 5229;5230 5134;5135 5135 7996 2 GGPASPGGLQGLETR SWAMNMYRGGPASPGG GLQGLETRRLSLPSSK R G G T R R 1 1 0 0 0 1 1 5 0 0 2 0 0 0 2 1 1 0 0 0 0 0 15 0 1395.7106 C9JWC4;Q8NCD3 C9JWC4 384 398 HJURP Holliday junction recognition protein yes no 2 0.0038438 79.347 By MS/MS By matching 1 1 104920000 51847000 53070000 2016 697 2281 5231;5232 5136 5136 1292 1 GGPASVPSSSPGTSVK GSPRTQGRGGPASVPS SSPGTSVKKPDPNIKN R G G V K K 1 0 0 0 0 0 0 3 0 0 0 1 0 0 3 5 1 0 0 2 0 0 16 0 1413.71 O43237;J3KRZ2;J3KRI4 O43237 398 413 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 2 0.00041371 107.11 By MS/MS By MS/MS 1 1 37297000 19029000 18268000 2017 1490 2282 5233;5234 5137;5138;5139 5138 2784;2785;2786 3 GGPEGVAAQAVASAASAGPADAEMEEIFDDASPGK GGSNSSNKGGPEGVAA FDDASPGKQKEIQEPD K G G G K Q 10 0 0 3 0 1 4 5 0 1 0 1 1 1 3 3 0 0 0 2 0 0 35 0 3272.4779 O60264 O60264 35 69 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 3;4 1.3513E-13 92.34 By MS/MS By MS/MS 2 1 64250000 35127000 29124000 2018 1513 2283 5235;5236;5237 5140;5141;5142;5143 5142 549 2846 4 GGPEGVAAQAVASAASAGPADAEMEEIFDDASPGKQK GGSNSSNKGGPEGVAA DASPGKQKEIQEPDPT K G G Q K E 10 0 0 3 0 2 4 5 0 1 0 2 1 1 3 3 0 0 0 2 0 0 37 1 3528.6315 O60264 O60264 35 71 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 3;4 7.2293E-15 94.356 By MS/MS By MS/MS 2 3 276250000 123950000 152300000 2019 1513 2284;2285 5238;5239;5240;5241;5242 5144;5145;5146;5147;5148;5149 5147 549 2846 6 GGPGKLSPR DFALPSSRGGPGKLSP GPGKLSPRKGVSQTGT R G G P R K 0 1 0 0 0 0 0 3 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 867.49265 Q12888 Q12888 1356 1364 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 2 0.021545 74.78 By MS/MS 1 0 0 0 2020 2031 2286 5243 5150 5150 3952 1 GGRSPDEVTLTSIVPTR RTISRKEKGGRSPDEV LTSIVPTRDGTAPPPQ K G G T R D 0 2 0 1 0 0 1 2 0 1 1 0 0 0 2 2 3 0 0 2 0 0 17 1 1783.9428 A0A0C4DGG1;Q9UKS6;H0YDM6 A0A0C4DGG1 316 332 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 3 0.004874 90.706 By MS/MS 1 0 0 0 2021 318 2287 5244 5151 5151 553 1 GGSDDSSKDPIDVNYEK EVAYSLLRGGSDDSSK PIDVNYEKLKTDIKVV R G G E K L 0 0 1 4 0 0 1 2 0 1 0 2 0 0 1 3 0 0 1 1 0 0 17 1 1824.8014 P09874 P09874 780 796 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.02056 67.645 By MS/MS By MS/MS 1 1 29006000 20976000 8030200 2022 1665 2288 5245;5246 5152;5153 5152 3141 2 GGSGSGPTIEEVD GFGAQGPKGGSGSGPT GPTIEEVD________ K G G V D - 0 0 0 1 0 0 2 4 0 1 0 0 0 0 1 2 1 0 0 1 0 0 13 0 1203.5255 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 630 642 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 1;2 1.6056E-19 166.29 By MS/MS By MS/MS 4 4 95532000 47035000 48497000 2023 351 2289;2290 5247;5248;5249;5250;5251;5252;5253;5254 5154;5155;5156;5157;5158;5159 5156 626;627;6931 6 GGSGSHNWGTVKDELTESPK GLKHEDKRGGSGSHNW DELTESPKYIQKQISY R G G P K Y 0 0 1 1 0 0 2 4 1 0 1 2 0 0 1 3 2 1 0 1 0 0 20 1 2084.9763 Q8NC51 Q8NC51 217 236 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2;3;4 3.0011E-05 121.5 By MS/MS By MS/MS 3 3 575960000 328690000 247270000 2024 2498 2291 5255;5256;5257;5258;5259;5260 5160;5161;5162;5163;5164 5160 5097 4 GGSISVQVNSIKFDSE KKKRGSYRGGSISVQV NSIKFDSE________ R G G S E - 0 0 1 1 0 1 1 2 0 2 0 1 0 1 0 4 0 0 0 2 0 0 16 1 1665.821 A0A0A0MRM9;Q14978 A0A0A0MRM9 693 708 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 5.6419E-63 192.23 By MS/MS By MS/MS 6 7 88409000 43093000 45316000 2025 222 2292 5261;5262;5263;5264;5265;5266;5267;5268;5269;5270;5271;5272;5273 5165;5166;5167;5168;5169;5170;5171;5172;5173;5174;5175;5176;5177;5178;5179;5180;5181 5177 390 16 GGSPQMDDIK DSEEPDSRGGSPQMDD SPQMDDIKVFQNEVLG R G G I K V 0 0 0 2 0 1 0 2 0 1 0 1 1 0 1 1 0 0 0 0 0 0 10 0 1046.4703 Q13144 Q13144 542 551 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes yes 2 0.029968 52.247 By MS/MS 1 0 0 0 2026 2046 2293 5274 5182 5182 815 1 GGSSVEAPCPSDVTPEDDR NQDPDSCRGGSSVEAP DVTPEDDRSFQTVWAT R G G D R S 1 1 0 3 1 0 2 2 0 0 0 0 0 0 3 3 1 0 0 2 0 0 19 0 1973.8273 Q9BY89 Q9BY89 587 605 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.0039915 81.639 By matching By MS/MS 1 1 31031000 16145000 14886000 2027 2777 2294 5275;5276 5183 5183 7837 1 GGTSQVGSPTLLSPAVPSK SLSTPRSRGGTSQVGS LSPAVPSKQKRDRSIL R G G S K Q 1 0 0 0 0 1 0 3 0 0 2 1 0 0 3 4 2 0 0 2 0 0 19 0 1781.9523 Q8IY92 Q8IY92 1063 1081 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2 6.7674E-05 123.54 By MS/MS By MS/MS 1 1 31288000 13423000 17865000 2028 2440 2295 5277;5278 5184;5185 5185 4992;4993 2 GGTTSWGTSGQPSPSYDSSR SGSGIDERGGTTSWGT SPSYDSSRGFTDSPHY R G G S R G 0 1 0 1 0 1 0 4 0 0 0 0 0 0 2 6 3 1 1 0 0 0 20 0 2013.8664 Q99081;H0YNQ5 Q99081 55 74 TCF12 Transcription factor 12 yes no 2 0.0072688 65.954 By MS/MS By MS/MS 1 1 27600000 15681000 11918000 2029 2718 2296 5279;5280 5186;5187 5187 5642 2 GGVTGSPEASISGSK NFSKPKGKGGVTGSPE EASISGSKGDLKSSKA K G G S K G 1 0 0 0 0 0 1 4 0 1 0 1 0 0 1 4 1 0 0 1 0 0 15 0 1332.6521 Q09666 Q09666 5726 5740 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.016026 85.988 By MS/MS By matching 1 1 41022000 23552000 17470000 2030 2020 2297 5281;5282 5188 5188 3912 0 GGYLSDGDSPELTTK MSSKYSCKGGYLSDGD DSPELTTKASKHGSEN K G G T K A 0 0 0 2 0 0 1 3 0 0 2 1 0 0 1 2 2 0 1 0 0 0 15 0 1538.71 Q5VT97 Q5VT97 618 632 SYDE2 Rho GTPase-activating protein SYDE2 yes yes 2 0.0066158 75.998 By MS/MS 1 4413600 0 4413600 2031 2265 2298 5283 5189;5190 5190 4547 2 GHLSRPEAQSLSPYTTSANR GTTEPHSRGHLSRPEA PYTTSANRAKLLAKNR R G H N R A 2 2 1 0 0 1 1 1 1 0 2 0 0 0 2 4 2 0 1 0 0 0 20 1 2171.0719 O94776 O94776 424 443 MTA2 Metastasis-associated protein MTA2 yes yes 3 0.00018085 91.202 By MS/MS By MS/MS 1 1 60147000 25917000 34230000 2032 1565 2299 5284;5285 5191;5192;5193 5193 2959;2960 3 GHTASESDEQQWPEEK GSQRSRKRGHTASESD EQQWPEEKRLKEDILE R G H E K R 1 0 0 1 0 2 4 1 1 0 0 1 0 0 1 2 1 1 0 0 0 0 16 0 1856.7813 Q9NTI5;A9IYQ1 Q9NTI5 1253 1268 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2;3 0.00025634 111.7 By MS/MS By matching 2 1 61463000 36322000 25142000 2033 2918 2300 5286;5287;5288 5194;5195 5194 6160;6161;7880 1 GHTASESDEQQWPEEKR GSQRSRKRGHTASESD QQWPEEKRLKEDILEN R G H K R L 1 1 0 1 0 2 4 1 1 0 0 1 0 0 1 2 1 1 0 0 0 0 17 1 2012.8824 Q9NTI5;A9IYQ1 Q9NTI5 1253 1269 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 0.011841 55.744 By MS/MS By matching 1 1 29454000 17614000 11840000 2034 2918 2301 5289;5290 5196 5196 6160;6161;7880 1 GHTGGHHSPVK FHANQTSKGHTGGHHS GGHHSPVKGAKPHFIT K G H V K G 0 0 0 0 0 0 0 3 3 0 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1112.5475 H7C280;A0A0A0MQU4;Q96I15 H7C280 110 120 SCLY Selenocysteine lyase yes no 2 0.022137 63.624 By MS/MS By matching 1 1 384420 193310 191110 2035 191 2302 5291;5292 5197 5197 342 1 GHYTEGAELVDSVLDVVR GAGNNWAKGHYTEGAE DSVLDVVRKEAESCDC K G H V R K 1 1 0 2 0 0 2 2 1 0 2 0 0 0 0 1 1 0 1 4 0 0 18 0 1957.9745 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A0B4J269;Q13509;G3V2A3;P68371 Q5JP53 86 103 TUBB;TUBB2B;TUBB2A;TUBB3;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain;Tubulin beta-4B chain no no 3 0.016517 64.327 By MS/MS 1 0 0 0 2036 1653;1958 2303 5293 5198 5198 1 GHYYVPLLR ERIREYLKGHYYVPLL HYYVPLLRAEETSSPV K G H L R A 0 1 0 0 0 0 0 1 1 0 2 0 0 0 1 0 0 0 2 1 0 0 9 0 1116.608 Q86XL3 Q86XL3 474 482 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0074602 88.029 By MS/MS By MS/MS 1 1 6813400 4217800 2595600 2037 2418 2304 5294;5295 5199;5200 5200 8390 2 GIAYIEFK VSKDGKSKGIAYIEFK GIAYIEFKTEADAEKT K G I F K T 1 0 0 0 0 0 1 1 0 2 0 1 0 1 0 0 0 0 1 0 0 0 8 0 939.50657 P19338;H7BY16 P19338 430 437 NCL Nucleolin yes no 2 0.02728 89.369 By MS/MS By MS/MS 1 1 2862300 0 2862300 2038 1732 2305 5296;5297 5201;5202 5202 2 GIDSDDVQDNSQLK TPTTETIRGIDSDDVQ VQDNSQLKASTQKAAN R G I L K A 0 0 1 4 0 2 0 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 14 0 1532.6954 A0A075B754;Q96QE3 A0A075B754 611 624 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.00012901 121.42 By MS/MS By matching 1 1 20383000 7710600 12672000 2039 18 2306 5298;5299 5203 5203 30 1 GIGFGDIFKEGSVK VTQPKKIRGIGFGDIF IFKEGSVKLRTRTSSS R G I V K L 0 0 0 1 0 0 1 4 0 2 0 2 0 2 0 1 0 0 0 1 0 0 14 1 1452.7613 Q9Y5K6 Q9Y5K6 213 226 CD2AP CD2-associated protein yes yes 2 8.9587E-11 140.93 By MS/MS By matching 1 1 17663000 10324000 7339100 2040 3130 2307 5300;5301 5204 5204 6706 1 GIGLDESELDSEAELMR TAESHDSKGIGLDESE DSEAELMRSMGLPLQF K G I M R S 1 1 0 2 0 0 4 2 0 1 3 0 1 0 0 2 0 0 0 0 0 0 17 0 1862.8568 Q96RS0 Q96RS0 79 95 TGS1 Trimethylguanosine synthase yes yes 2 4.669E-52 183.76 By MS/MS By MS/MS 3 3 75112000 39862000 35249000 2041 2704 2308;2309;2310 5302;5303;5304;5305;5306;5307 5205;5206;5207;5208;5209 5208 1075 5580;5581 4 GIGLPGPNPSPMSR PNSGPSSRGIGLPGPN PNPSPMSRAPGPIGPN R G I S R A 0 1 1 0 0 0 0 3 0 1 1 0 1 0 4 2 0 0 0 0 0 0 14 0 1378.7027 P0CG12 P0CG12 323 336 CHTF8 Chromosome transmission fidelity protein 8 homolog isoform 2 yes yes 2 0.017666 52.891 By MS/MS By matching 1 1 19264000 10284000 8979900 2042 1668 2311 5308;5309 5210 5210 619 3148 1 GIIGYDV VGEIIGKRGIIGYDV_ RGIIGYDV________ R G I D V - 0 0 0 1 0 0 0 2 0 2 0 0 0 0 0 0 0 0 1 1 0 0 7 0 735.38031 O75964 O75964 97 103 ATP5L ATP synthase subunit g, mitochondrial yes yes 1 0.0087414 99.511 By MS/MS By MS/MS 1 1 4386600 1879000 2507600 2043 1560 2312 5310;5311 5211;5212 5212 1 GIITDSFGR TIGVKDGRGIITDSFG IITDSFGRHRRALSTT R G I G R H 0 1 0 1 0 0 0 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 9 0 964.49779 C9JUH3;A0A0A0MT72;Q9BSQ5 C9JUH3 282 290 CCM2 Cerebral cavernous malformations 2 protein yes no 2 0.0040106 89.171 By MS/MS By MS/MS 1 1 17982000 8593400 9388900 2044 267 2313 5312;5313 5213;5214 5213 473 2 GILAADESTGSIAK HRIVAPGKGILAADES ESTGSIAKRLQSIGTE K G I A K R 3 0 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 14 0 1331.6933 J3KPS3;P04075;H3BQN4;H3BUH7;H3BPS8 J3KPS3 29 42 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0085058 82.494 By MS/MS By matching 2 2 18373000 9720100 8652900 2045 1327 2314;2315 5314;5315;5316;5317 5215;5216 5215 2460;2461 2 GILAADESTGSIAKR HRIVAPGKGILAADES STGSIAKRLQSIGTEN K G I K R L 3 1 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 15 1 1487.7944 J3KPS3;P04075;H3BQN4;H3BUH7;H3BPS8 J3KPS3 29 43 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2;3 0.0010161 105.58 By MS/MS By MS/MS 1 1 8593400 6207100 2386300 2046 1327 2316 5318;5319 5217;5218 5217 2460;2461 1 GILESLMCNESSMQSLRQR FKNQKKIRGILESLMC SMQSLRQRKSVNALNS R G I Q R K 0 2 1 0 1 2 2 1 0 1 3 0 2 0 0 4 0 0 0 0 0 0 19 1 2238.0555 A0A0A0MTJ0;P16473 A0A0A0MTJ0 294 312 TSHR Thyrotropin receptor yes no 3 0.02858 40.856 By MS/MS 1 5817900 0 5817900 2047 273 2317 5320 5219 5219 112 0 GILHLSPDVYQEMEASR EPTNNTPKGILHLSPD YQEMEASRHKVISGTT K G I S R H 1 1 0 1 0 1 2 1 1 1 2 0 1 0 1 2 0 0 1 1 0 0 17 0 1943.9411 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 24 40 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 3 0.0053214 75.319 By MS/MS By MS/MS 1 1 8188600 0 8188600 2048 270 2318 5321;5322 5220;5221 5220 111 476 2 GILLEDGSESPAKR GETPTKKRGILLEDGS GSESPAKRICPENHSA R G I K R I 1 1 0 1 0 0 2 2 0 1 2 1 0 0 1 2 0 0 0 0 0 0 14 1 1470.7678 Q08999 Q08999 1103 1116 RBL2 Retinoblastoma-like protein 2 yes yes 2 0.0095242 76.156 By MS/MS 1 5947600 0 5947600 2049 2016 2319 5323 5222 5222 3885 1 GILSLPHQASPVSR PTSPLNNKGILSLPHQ HQASPVSRTPSLPAVD K G I S R T 1 1 0 0 0 1 0 1 1 1 2 0 0 0 2 3 0 0 0 1 0 0 14 0 1460.81 O75925 O75925 494 507 PIAS1 E3 SUMO-protein ligase PIAS1 yes yes 3 0.00017204 100.38 By MS/MS By MS/MS 1 1 31579000 17557000 14023000 2050 1559 2320 5324;5325 5223;5224;5225 5224 2946 3 GILYAAPQLR SQSYEDMRGILYAAPQ LYAAPQLRSIRGQPGP R G I L R S 2 1 0 0 0 1 0 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 10 0 1100.6342 P15391 P15391 505 514 CD19 B-lymphocyte antigen CD19 yes yes 2 0.0061448 86.794 By MS/MS 1 2845600 2845600 0 2051 1705 2321 5326 5226 5226 8229 1 GINGGPSRMSPK PGPGSEARGINGGPSR GPSRMSPKAQRPLRGA R G I P K A 0 1 1 0 0 0 0 3 0 1 0 1 1 0 2 2 0 0 0 0 0 0 12 1 1199.6081 Q8WWM7;H3BUF6 Q8WWM7 400 411 ATXN2L Ataxin-2-like protein yes no 2 0.02846 48.532 By MS/MS 1 0 0 0 2052 2564 2322 5327 5227 5227 1027 1 GIPHSLSGLQDPIIAR DDSHSGKRGIPHSLSG LQDPIIARMSICSEDK R G I A R M 1 1 0 1 0 1 0 2 1 3 2 0 0 0 2 2 0 0 0 0 0 0 16 0 1672.9261 Q9ULH0 Q9ULH0 1627 1642 KIDINS220 Kinase D-interacting substrate of 220 kDa yes yes 2;3 0.00048876 91.317 By MS/MS By MS/MS 2 2 22079000 11343000 10736000 2053 3041 2323 5328;5329;5330;5331 5228;5229;5230;5231 5229 6399;6400 3 GIPLATGDTSPEPELLPGAPLPPPK CVTSELLKGIPLATGD GAPLPPPKEVINGNIK K G I P K E 2 0 0 1 0 0 2 3 0 1 4 1 0 0 8 1 2 0 0 0 0 0 25 0 2463.3261 K7EL60;K7ER90;K7EL20;K7ENA8;O75821 K7EL60 33 57 EIF3G Eukaryotic translation initiation factor 3 subunit G yes no 2;3;4 1.7452E-20 144.5 By MS/MS By MS/MS 4 3 731800000 424730000 307070000 2054 1379 2324;2325 5332;5333;5334;5335;5336;5337;5338 5232;5233;5234;5235;5236;5237;5238;5239;5240;5241 5233 2545;7263;7264 10 GIQLYDTPYEPEGQSVDSDSESTVSPR ESVRSQHKGIQLYDTP SESTVSPRLRESKLPQ K G I P R L 0 1 0 3 0 2 3 2 0 1 1 0 0 0 3 5 2 0 2 2 0 0 27 0 2955.3258 Q15464 Q15464 293 319 SHB SH2 domain-containing adapter protein B yes yes 3 0.0010001 62.069 By matching By MS/MS 1 1 17887000 8568800 9318400 2055 2142 2326 5339;5340 5242;5243 5243 4251;8352 2 GIQYIDLSSDSEDVVSPNCSNTVQEK ISYFKNQRGIQYIDLS CSNTVQEKTFNKDTVI R G I E K T 0 0 2 3 1 2 2 1 0 2 1 1 0 0 1 5 1 0 1 3 0 0 26 0 2883.308 D6RAY8;Q9H4L7 D6RAY8 88 113 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 0.00015241 73.839 By MS/MS 1 22262000 22262000 0 2056 747 2327 5341 5244 5244 1352 1 GIRPFPSEETTENDDDVYR LHSIAQNKGIRPFPSE ENDDDVYRSLEELADE K G I Y R S 0 2 1 3 0 0 3 1 0 1 0 0 0 1 2 1 2 0 1 1 0 0 19 1 2239.0029 P52735 P52735 125 143 VAV2 Guanine nucleotide exchange factor VAV2 yes yes 3 9.2585E-07 131.48 By MS/MS 1 24512000 24512000 0 2057 1890 2328 5342 5245 5245 8296 1 GISEDSHLESLQDVGQSAAPTFMISPETVTGTGK MEIAQTQKGISEDSHL ETVTGTGKKCSLPAEE K G I G K K 2 0 0 2 0 2 3 4 1 2 2 1 1 1 2 5 4 0 0 2 0 0 34 0 3488.6617 E7EVA0;P27816 E7EVA0 617 650 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 6.0164E-05 63.033 By matching By MS/MS 1 1 87414000 41645000 45768000 2058 828 2329 5343;5344 5246 5246 314 1536;7095 1 GISEDSHLESLQDVGQSAAPTFMISPETVTGTGKK MEIAQTQKGISEDSHL TVTGTGKKCSLPAEED K G I K K C 2 0 0 2 0 2 3 4 1 2 2 2 1 1 2 5 4 0 0 2 0 0 35 1 3616.7567 E7EVA0;P27816 E7EVA0 617 651 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3;4 3.1009E-05 63.453 By MS/MS By matching 2 2 79706000 42034000 37672000 2059 828 2330 5345;5346;5347;5348 5247;5248 5248 314 1536;7095 2 GISPIVFDR KKERKRARGISPIVFD ISPIVFDRSGSSASES R G I D R S 0 1 0 1 0 0 0 1 0 2 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1002.5498 J3QR07;Q96MU7 J3QR07 306 314 YTHDC1 YTH domain-containing protein 1 yes no 2 0.0053934 86.014 By MS/MS By MS/MS 1 1 211740000 123060000 88684000 2060 1353 2331 5349;5350 5249;5250;5251 5251 2498 3 GISQTNLITTVTPEK TGQYATTKGISQTNLI ITTVTPEKKAEEERDE K G I E K K 0 0 1 0 0 1 1 1 0 2 1 1 0 0 1 1 4 0 0 1 0 0 15 0 1600.8672 A8K968;A0A0A0MRA8;A0A0A0MSA4;A0A0J9YW26;A0A1B0GTF8;Q9Y2J2;J3KT37 A8K968 367 381 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 2 0.028725 59.898 By MS/MS 1 2887600 0 2887600 2061 205 2332 5351 5252 5252 364;6884;6885 1 GISQTNLITTVTPEKK TGQYATTKGISQTNLI TTVTPEKKAEEERDEE K G I K K A 0 0 1 0 0 1 1 1 0 2 1 2 0 0 1 1 4 0 0 1 0 0 16 1 1728.9622 A8K968;A0A0A0MRA8;A0A0A0MSA4;A0A0J9YW26;A0A1B0GTF8;Q9Y2J2 A8K968 367 382 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 2;3 5.5869E-05 120.74 By MS/MS By MS/MS 4 4 116670000 66811000 49861000 2062 205 2333;2334 5352;5353;5354;5355;5356;5357;5358;5359 5253;5254;5255;5256;5257;5258;5259 5253 364;6884;6885 7 GIVNLNELQSSDGPLK HIALLVHRGIVNLNEL QSSDGPLKDMQFGNKI R G I L K D 0 0 2 1 0 1 1 2 0 1 3 1 0 0 1 2 0 0 0 1 0 0 16 0 1682.8839 Q86YH6 Q86YH6 164 179 PDSS2 Decaprenyl-diphosphate synthase subunit 2 yes yes 4 0.014919 49.188 By matching By MS/MS 1 1 61672000 45342000 16330000 2063 2419 2335 5360;5361 5260 5260 4938;4939 1 GKASPFEEDQNR GPEKGDQKGKASPFEE PFEEDQNRDLKQGDDD K G K N R D 1 1 1 1 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 12 1 1376.6321 C9JW01;A0A0C4DG68;A0A0A0MR59;Q8TB72 C9JW01 133 144 PUM2 Pumilio homolog 2 yes no 2 0.0015 101.61 By MS/MS By matching 1 1 39480000 22450000 17030000 2064 199 2336 5362;5363 5261 5261 352 1 GKDSLSDDGVDLK ________________ SDDGVDLKTQPVRNTE K G K L K T 0 0 0 4 0 0 0 2 0 0 2 2 0 0 0 2 0 0 0 1 0 0 13 1 1347.6518 P07948;E5RJ37 P07948 8 20 LYN Tyrosine-protein kinase Lyn yes no 2;3 0.0018963 101.04 By MS/MS By MS/MS 1 2 39421000 23804000 15617000 2065 1657 2337 5364;5365;5366 5262;5263;5264 5262 3124 3 GKELSDQATASPIVAR EDDSLDSKGKELSDQA TASPIVARTDLSNIPG K G K A R T 3 1 0 1 0 1 1 1 0 1 1 1 0 0 1 2 1 0 0 1 0 0 16 1 1641.8686 Q5JSH3 Q5JSH3 86 101 WDR44 WD repeat-containing protein 44 yes yes 2;3 0.00064247 101.54 By MS/MS By MS/MS 2 2 35743000 20791000 14952000 2066 2219 2338 5367;5368;5369;5370 5265;5266;5267;5268 5265 4433;7633 4 GKGSPRPQAPK EEEEEKLKGKGSPRPQ SPRPQAPKANGTSALT K G K P K A 1 1 0 0 0 1 0 2 0 0 0 2 0 0 3 1 0 0 0 0 0 0 11 2 1121.6305 A0A0A0MRM9;Q14978 A0A0A0MRM9 544 554 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2;3 0.0030777 103.14 By MS/MS By MS/MS 2 2 240020000 49981000 190040000 2067 222 2339 5371;5372;5373;5374 5269;5270;5271 5270 391 3 GKLEAIITPPPAK LAKKRGSKGKLEAIIT IITPPPAKKAKSPSQK K G K A K K 2 0 0 0 0 0 1 1 0 2 1 2 0 0 3 0 1 0 0 0 0 0 13 1 1333.7969 D6RCF2;O75367 D6RCF2 122 134 H2AFY Histone H2A;Core histone macro-H2A.1 yes no 2;3 0.0019319 123.01 By MS/MS By MS/MS 2 1 27557000 18071000 9486500 2068 755 2340 5375;5376;5377 5272;5273;5274 5273 7055 2 GKLSAEENPDDSEVPSSSGINSTK EKKSLQEKGKLSAEEN SSGINSTKSQDKDVNE K G K T K S 1 0 2 2 0 0 3 2 0 1 1 2 0 0 2 6 1 0 0 1 0 0 24 1 2447.13 Q9Y5Q9 Q9Y5Q9 40 63 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 2;3 2.7128E-61 187.04 By MS/MS By MS/MS 2 2 325340000 142090000 183250000 2069 3132 2341 5378;5379;5380;5381 5275;5276;5277;5278 5278 6710 4 GKSLDQCVETLQK IHAVVLPRGKSLDQCV QCVETLQKQTRVGKAG R G K Q K Q 0 0 0 1 1 2 1 1 0 0 2 2 0 0 0 1 1 0 0 1 0 0 13 1 1504.7555 V9GY48;Q8N5A5 V9GY48 257 269 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes no 2 0.015388 75.998 By MS/MS 1 4513200 4513200 0 2070 2475 2342 5382 5279 5279 5061 1 GKTPEEIRK KTVANMIKGKTPEEIR KTPEEIRKTFNIK___ K G K R K T 0 1 0 0 0 0 2 1 0 1 0 2 0 0 1 0 1 0 0 0 0 0 9 2 1056.5928 E7ERH2;F8W8N3;E5RJR5;P63208 E7ERH2 129 137 SKP1 S-phase kinase-associated protein 1 yes no 3 0.0095274 78.516 By MS/MS By matching 1 1 4215400 1938800 2276600 2071 786 2343 5383;5384 5280 5280 7064 1 GLAAEDSGGDSKDLSEVSETTESTDVK GEACREEKGLAAEDSG TTESTDVKDSSEASDS K G L V K D 2 0 0 4 0 0 4 3 0 0 2 2 0 0 0 5 3 0 0 2 0 0 27 1 2726.2254 P41227 P41227 199 225 NAA10 N-alpha-acetyltransferase 10 yes yes 3 5.1973E-06 81.06 By MS/MS By MS/MS 1 1 49064000 27149000 21915000 2072 1819 2344 5385;5386 5281;5282 5282 3426 2 GLAAGSAETLPANFR KFRPKDIRGLAAGSAE ETLPANFRVTSSMSSP R G L F R V 4 1 1 0 0 0 1 2 0 0 2 0 0 1 1 1 1 0 0 0 0 0 15 0 1473.7576 Q13136 Q13136 1151 1165 PPFIA1 Liprin-alpha-1 yes yes 2 2.3198E-33 175.27 By MS/MS By MS/MS 1 1 74835000 35717000 39118000 2073 2045 2345 5387;5388 5283;5284;5285;5286 5284 7550 4 GLAEVQQDGEAEEGATSDGEK EEITCLEKGLAEVQQD GATSDGEKKREGVTPW K G L E K K 3 0 0 2 0 2 5 4 0 0 1 1 0 0 0 1 1 0 0 1 0 0 21 0 2118.9189 Q02952 Q02952 582 602 AKAP12 A-kinase anchor protein 12 yes yes 2;3 1.6451E-168 241.92 By MS/MS By MS/MS 1 2 249670000 73157000 176520000 2074 1991 2346 5389;5390;5391 5287;5288;5289 5288 3827 3 GLAGPPASPGK GTPTLPPKGLAGPPAS GPPASPGKAQPPKPER K G L G K A 2 0 0 0 0 0 0 3 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 0 950.51853 Q9P206 Q9P206 538 548 KIAA1522 Uncharacterized protein KIAA1522 yes yes 2 0.011755 72.289 By MS/MS By MS/MS 1 1 17612000 8580100 9031500 2075 2969 2347 5392;5393 5290;5291 5290 6255 2 GLDDTEEPSPPEDK DINSDSSRGLDDTEEP EPSPPEDKMFFLDPSD R G L D K M 0 0 0 3 0 0 3 1 0 0 1 1 0 0 3 1 1 0 0 0 0 0 14 0 1527.6577 O94806 O94806 356 369 PRKD3 Serine/threonine-protein kinase D3 yes yes 2 0.0046917 80.507 By MS/MS By matching 1 1 6504100 3971100 2532900 2076 1569 2348 5394;5395 5292 5292 2971 1 GLDKEVSYNWDPK LPGKFLGRGLDKEVSY VSYNWDPKDAASKPSG R G L P K D 0 0 1 2 0 0 1 1 0 0 1 2 0 0 1 1 0 1 1 1 0 0 13 1 1549.7413 O14654 O14654 840 852 IRS4 Insulin receptor substrate 4 yes yes 2;3 6.8725E-15 159.66 By MS/MS By MS/MS 2 2 55442000 30582000 24861000 2077 1453 2349 5396;5397;5398;5399 5293;5294;5295;5296 5295 8179 3 GLDSGAETEEEKDTWEEK EEQGSKDRGLDSGAET EKDTWEEKKQREAERL R G L E K K 1 0 0 2 0 0 6 2 0 0 1 2 0 0 0 1 2 1 0 0 0 0 18 1 2051.8807 E9PGC8;P78559 E9PGC8 847 864 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.0054496 77.468 By MS/MS By matching 1 1 8460500 4766600 3693900 2078 872 2350 5400;5401 5297 5297 1607 1 GLDVEDVK IATDVASRGLDVEDVK GLDVEDVKFVINYDYP R G L V K F 0 0 0 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 8 0 873.44436 J3KTA4;P17844;Q92841 Q92841 404 411 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.016498 107.32 By MS/MS 1 5094700 0 5094700 2079 1341;2604 2351 5402 5298 5298 1 GLDWDAGHLSNRQQSYCYCGGPGEWNLKMLQCR LSLPYGLKGLDWDAGH NLKMLQCRSCLQWFHE K G L C R S 1 2 2 2 3 3 1 5 1 0 4 1 1 0 1 2 0 2 2 0 0 0 33 2 3955.7399 A2AB23;E9PQZ5;A0A140TA01;E9PQT8;O43189 A2AB23 173 205 PHF1 PHD finger protein 1 yes no 3 0.0057128 49.445 By MS/MS By matching 1 1 18983000 9091800 9891600 2080 406 2352 5403;5404 5299 5299 158 1 GLEFPMTDLDMLSPIHTPQR IYEDLRRKGLEFPMTD SPIHTPQRTVFNSETQ K G L Q R T 0 1 0 2 0 1 1 1 1 1 3 0 2 1 3 1 2 0 0 0 0 0 20 0 2297.1184 O60784;V9GYF4;B0QY02;B0QY01 O60784 148 167 TOM1 Target of Myb protein 1 yes no 3 0.013501 51.798 By MS/MS By MS/MS 1 1 15429000 7879500 7549700 2081 1527 2353 5405;5406 5300;5301 5301 552;553 2884 2 GLFIIDDK ADEGISFRGLFIIDDK GLFIIDDKGILRQITV R G L D K G 0 0 0 2 0 0 0 1 0 2 1 1 0 1 0 0 0 0 0 0 0 0 8 0 919.50148 A0A0A0MSI0;Q06830;A0A0A0MRQ5;H7C3T4;Q13162 A0A0A0MSI0 129 136 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 yes no 1 0.0053618 78.77 By MS/MS By matching 1 1 18571000 10262000 8309100 2082 247 2354 5407;5408 5302 5302 1 GLGAGAGAGEESPATSLPR LWVRWGRRGLGAGAGA SPATSLPRMKKRDFSL R G L P R M 4 1 0 0 0 0 2 5 0 0 2 0 0 0 2 2 1 0 0 0 0 0 19 0 1696.838 O15173 O15173 79 97 PGRMC2 Membrane-associated progesterone receptor component 2 yes yes 2;3 5.5168E-16 149.82 By MS/MS By MS/MS 2 2 51358000 22226000 29132000 2083 1475 2355 5409;5410;5411;5412 5303;5304;5305;5306 5305 2758;2759 3 GLGDCLVK SGTEREFRGLGDCLVK GLGDCLVKITKSDGIR R G L V K I 0 0 0 1 1 0 0 2 0 0 2 1 0 0 0 0 0 0 0 1 0 0 8 0 860.44259 P12236;P05141 P12236 156 163 SLC25A6;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 2 0.026065 84.244 By MS/MS 1 5174900 5174900 0 2084 1639 2356 5413 5307 5307 1 GLGEHEMEEDEEDYESSAK RGSRLLVRGLGEHEME EDYESSAKLLGMSFMN R G L A K L 1 0 0 2 0 0 7 2 1 0 1 1 1 0 0 2 0 0 1 0 0 0 19 0 2182.8485 Q9UIQ6 Q9UIQ6 57 75 LNPEP Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form yes yes 3 7.54E-05 113.14 By MS/MS 1 0 0 0 2085 3010 2357 5414 5308 5308 8494 1 GLGFSIAGGK ACLARSERGLGFSIAG GFSIAGGKGSTPYRAG R G L G K G 1 0 0 0 0 0 0 4 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 0 905.49707 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5 A0A0G2JNZ2 871 880 SCRIB Protein scribble homolog yes no 2 0.010976 73.9 By MS/MS By MS/MS 1 1 21148000 13486000 7662100 2086 361 2358 5415;5416 5309;5310 5310 650 2 GLGHPPSSPLLK SPPGFSAKGLGHPPSS PPSSPLLKKTPLALAG K G L L K K 0 0 0 0 0 0 0 2 1 0 3 1 0 0 3 2 0 0 0 0 0 0 12 0 1201.6819 B9EGQ5;M0QXA7;O95785 B9EGQ5 157 168 WIZ Protein Wiz yes no 2 0.0060546 78.548 By matching By MS/MS 1 1 30064000 17020000 13045000 2087 612 2359 5417;5418 5311 5311 1102;1103 1 GLGLGANLTEAQALTPTGPSR RVNSLRPKGLGLGANL LTPTGPSRMPRPDEEQ K G L S R M 3 1 1 0 0 1 1 4 0 0 4 0 0 0 2 1 3 0 0 0 0 0 21 0 2023.0698 Q92917 Q92917 202 222 GPKOW G patch domain and KOW motifs-containing protein yes yes 3 0.00027013 81.643 By MS/MS 1 3450300 0 3450300 2088 2610 2360 5419 5312 5312 7767 1 GLGPPSPPAPPR SLPGSPSRGLGPPSPP PSPPAPPRGPAGEAGA R G L P R G 1 1 0 0 0 0 0 2 0 0 1 0 0 0 6 1 0 0 0 0 0 0 12 0 1141.6244 Q13425;A0A140TA73 Q13425 90 101 SNTB2 Beta-2-syntrophin yes no 2 0.00089626 97.957 By MS/MS By MS/MS 1 2 124020000 62130000 61890000 2089 2058 2361 5420;5421;5422 5313;5314;5315;5316;5317;5318;5319;5320 5318 4050 8 GLGSSPDLELLLR DGGPKALKGLGSSPDL PDLELLLRSSQREEGD K G L L R S 0 1 0 1 0 0 1 2 0 0 5 0 0 0 1 2 0 0 0 0 0 0 13 0 1368.7613 Q9NQQ7 Q9NQQ7 332 344 SLC35C2 Solute carrier family 35 member C2 yes yes 2 2.5177E-26 174.46 By MS/MS By MS/MS 1 1 27526000 15941000 11586000 2090 2896 2362 5423;5424 5321;5322 5322 6096 2 GLGTFASSTVHIR G L I R 1 1 0 0 0 0 0 2 1 1 1 0 0 1 0 2 2 0 0 1 0 0 13 0 1344.715 REV__Q96H55 yes yes 2 0.015836 59.153 By MS/MS 1 8715800 0 8715800 + 2091 3222 2363 5425 5323 5323 6817;6818;7970 1 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK PDGVTEIRGLLAQGLR AGESPQPKAAPEASSP R G L P K A 4 1 1 0 0 2 2 5 0 0 5 1 0 0 8 2 0 0 0 0 0 0 31 1 3015.6142 Q96TA1 Q96TA1 655 685 FAM129B Niban-like protein 1 yes yes 3;4 2.4522E-10 98.491 By MS/MS By matching 4 3 71961000 39795000 32166000 2092 2717 2364;2365;2366;2367 5426;5427;5428;5429;5430;5431;5432 5324;5325;5326;5327;5328 5326 126 5640;5641 5 GLLASDLNTDGDMRVTPEPGAGPTQGLLR SKKIKMERGLLASDLN GPTQGLLRATEATAMA R G L L R A 2 2 1 3 0 1 1 5 0 0 5 0 1 0 3 1 3 0 0 1 0 0 29 1 2950.4818 Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1 Q86YP4 34 62 GATAD2A Transcriptional repressor p66-alpha yes no 3 1.3392E-05 77.791 By MS/MS By matching 1 1 36063000 21811000 14252000 2093 2420 2368 5433;5434 5329 5329 979 7705 1 GLLPGGTQVLDGTSGFSPAPK EEAKAQARGLLPGGTQ SGFSPAPKLVESPKEG R G L P K L 1 0 0 1 0 1 0 5 0 0 3 1 0 1 3 2 2 0 0 1 0 0 21 0 1998.0422 Q96S94 Q96S94 314 334 CCNL2 Cyclin-L2 yes yes 2;3 0.00022209 111.4 By MS/MS By MS/MS 2 2 72242000 37950000 34292000 2094 2710 2369 5435;5436;5437;5438 5330;5331;5332;5333 5331 5593 4 GLLPSQYGQEVYDTPPMAVK IYDVPPVRGLLPSQYG DTPPMAVKGPNGRDPL R G L V K G 1 0 0 1 0 2 1 2 0 0 2 1 1 0 3 1 1 0 2 2 0 0 20 0 2192.0824 P56945 P56945 256 275 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 3 0.0016188 95.094 By MS/MS By MS/MS 2 2 17263000 7981400 9281600 2095 1919 2370 5439;5440;5441;5442 5334;5335;5336 5336 748 8304 2 GLLSILR ________________ MGLLSILRKLKSAPDQ M G L L R K 0 1 0 0 0 0 0 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 7 0 770.50142 P36405 P36405 2 8 ARL3 ADP-ribosylation factor-like protein 3 yes yes 2 0.026226 85.67 By MS/MS By MS/MS 1 1 6686400 4602200 2084200 2096 1802 2371 5443;5444 5337;5338 5337 3407 2 GLLSILRK ________________ GLLSILRKLKSAPDQE M G L R K L 0 1 0 0 0 0 0 1 0 1 3 1 0 0 0 1 0 0 0 0 0 0 8 1 898.59639 P36405 P36405 2 9 ARL3 ADP-ribosylation factor-like protein 3 yes yes 2 0.010187 104.42 By MS/MS By MS/MS 1 1 5158400 3659200 1499300 2097 1802 2372 5445;5446 5339;5340 5339 3407 2 GLLSNHTGSPR EFQEHCRRGLLSNHTG SNHTGSPRSPSTTYLH R G L P R S 0 1 1 0 0 0 0 2 1 0 2 0 0 0 1 2 1 0 0 0 0 0 11 0 1137.5891 Q13111 Q13111 764 774 CHAF1A Chromatin assembly factor 1 subunit A yes yes 2 0.0027901 105.66 By MS/MS By matching 1 1 22692000 13122000 9570200 2098 2040 2373 5447;5448 5341 5341 7546 1 GLLSPPMGQSGLR GMEFGGGRGLLSPPMG PMGQSGLREVDPPMGP R G L L R E 0 1 0 0 0 1 0 3 0 0 3 0 1 0 2 2 0 0 0 0 0 0 13 0 1311.6969 A0A087WZX0;Q86UU0 A0A087WZX0 710 722 BCL9L B-cell CLL/lymphoma 9-like protein yes no 2 0.0096701 71.933 By MS/MS 1 0 0 0 2099 148 2374 5449 5342 5342 57 244 1 GLLYDSDEEDEER RGLGRMRRGLLYDSDE SDEEDEERPARKRRQV R G L E R P 0 1 0 3 0 0 4 1 0 0 2 0 0 0 0 1 0 0 1 0 0 0 13 0 1568.6478 P49736 P49736 134 146 MCM2 DNA replication licensing factor MCM2 yes yes 2 0.01204 71.279 By MS/MS By MS/MS 1 1 8261300 4420400 3840900 2100 1857 2375 5450;5451 5343;5344 5344 3578 2 GLLYDSDEEDEERPAR RGLGRMRRGLLYDSDE EDEERPARKRRQVERA R G L A R K 1 2 0 3 0 0 4 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 16 1 1892.8388 P49736 P49736 134 149 MCM2 DNA replication licensing factor MCM2 yes yes 2;3 1.0512E-16 153.48 By MS/MS By MS/MS 2 2 5323000000 2602800000 2720300000 2101 1857 2376 5452;5453;5454;5455 5345;5346;5347;5348 5347 3578 4 GLLYDSDEEDEERPARK RGLGRMRRGLLYDSDE DEERPARKRRQVERAT R G L R K R 1 2 0 3 0 0 4 1 0 0 2 1 0 0 1 1 0 0 1 0 0 0 17 2 2020.9338 P49736 P49736 134 150 MCM2 DNA replication licensing factor MCM2 yes yes 3 0.0095506 69.345 By MS/MS By MS/MS 1 1 515760000 200420000 315340000 2102 1857 2377 5456;5457 5349;5350 5349 3578 2 GLMAGGRPEGQYSEDEDTDTDEYKEAK AAGLLAARGLMAGGRP TDEYKEAKASINPVTG R G L A K A 2 1 0 4 0 1 5 4 0 0 1 2 1 0 1 1 2 0 2 0 0 0 27 2 2990.2724 H0YE35;Q9NPQ8;H0YC88 H0YE35 32 58 RIC8A Synembryn-A yes no 3 7.9369E-05 83.727 By MS/MS 1 0 0 0 2103 1173 2378 5458 5351 5351 7217;7218;8157 1 GLNPDGTPALSTLGGFSPASKPSSPR QEAKLKAKGLNPDGTP ASKPSSPREVKAEEKS K G L P R E 2 1 1 1 0 0 0 4 0 0 3 1 0 1 5 5 2 0 0 0 0 0 26 1 2510.2765 Q9UK58 Q9UK58 319 344 CCNL1 Cyclin-L1 yes yes 3 1.3627E-06 104.53 By MS/MS By MS/MS 3 3 346140000 163770000 182380000 2104 3017 2379;2380;2381 5459;5460;5461;5462;5463;5464 5352;5353;5354;5355;5356;5357;5358 5358 6349;6350;6351;6352;7903 7 GLNSPVLIGK QTNIQNLKGLNSPVLI NSPVLIGKSKDPSCVA K G L G K S 0 0 1 0 0 0 0 2 0 1 2 1 0 0 1 1 0 0 0 1 0 0 10 0 996.59678 R4GNB1;Q4L235 R4GNB1 568 577 AASDH Acyl-CoA synthetase family member 4 yes no 2 0.002799 89.355 By MS/MS 1 4389700 4389700 0 2105 2196 2382 5465 5359 5359 4381 1 GLNSSFETSPK SSFQGSKRGLNSSFET SSFETSPKKVKWSSTV R G L P K K 0 0 1 0 0 0 1 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 11 0 1165.5615 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63 M0QZ79 51 61 VRK3 Inactive serine/threonine-protein kinase VRK3 yes no 2 8.949E-06 126.5 By MS/MS By MS/MS 2 2 58794000 28567000 30227000 2106 1399 2383;2384 5466;5467;5468;5469 5360;5361;5362 5360 2570;2571 2 GLNVIGASDQSPLQSPSNLR ACLREKKKGLNVIGAS LQSPSNLRDNPFRTTQ K G L L R D 1 1 2 1 0 2 0 2 0 1 3 0 0 0 2 4 0 0 0 1 0 0 20 0 2052.06 A0JP02;B4DJX4;Q9HAU0;H0YGJ6 A0JP02 681 700 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes no 2;3 0.0079636 65.149 By matching By MS/MS 1 2 24206000 8591100 15615000 2107 439 2385 5470;5471;5472 5363;5364 5363 821;822 2 GLPFYAGLSPAGK RERLHGGKGLPFYAGL AGLSPAGKLVAYKRKP K G L G K L 2 0 0 0 0 0 0 3 0 0 2 1 0 1 2 1 0 0 1 0 0 0 13 0 1276.6816 Q8IWI9 Q8IWI9 1449 1461 MGA MAX gene-associated protein yes yes 2 0.0046319 81.632 By MS/MS By matching 1 1 9861800 5725400 4136400 2108 2429 2386 5473;5474 5365 5365 4963 1 GLPLGSAVSSPVLFSPVGR TPRTASRKGLPLGSAV VLFSPVGRRSSLSSRG K G L G R R 1 1 0 0 0 0 0 3 0 0 3 0 0 1 3 4 0 0 0 3 0 0 19 0 1839.0254 Q8WUM0 Q8WUM0 36 54 NUP133 Nuclear pore complex protein Nup133 yes yes 2 5.0861E-16 150.13 By matching By MS/MS 1 1 11713000 7317200 4396000 2109 2555 2387 5475;5476 5366;5367 5366 5217;5218;5219 2 GLPPSMER DRVGRQERGLPPSMER GLPPSMERGYPPPRDS R G L E R G 0 1 0 0 0 0 1 1 0 0 1 0 1 0 2 1 0 0 0 0 0 0 8 0 885.43784 P38159;H3BUY5 P38159 348 355 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 2 0.015483 77.533 By MS/MS By MS/MS 1 1 18035000 8359900 9674900 2110 1806 2388 5477;5478 5368;5369 5369 3414 2 GLPSDYGR PLELQPPRGLPSDYGR GLPSDYGRPLSFPPPR R G L G R P 0 1 0 1 0 0 0 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 8 0 863.41373 O15357;H0YFZ4;H7BXR2 O15357 1157 1164 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 0.019576 87.323 By matching By MS/MS 1 1 17792000 9487800 8303700 2111 1479 2389 5479;5480 5370 5370 8193 1 GLPSPYNMSSAPGSR EAASVSSKGLPSPYNM MSSAPGSRSGSRSGSR K G L S R S 1 1 1 0 0 0 0 2 0 0 1 0 1 0 3 4 0 0 1 0 0 0 15 0 1519.7089 P15924 P15924 2812 2826 DSP Desmoplakin yes yes 2 0.0057521 65.511 By MS/MS By MS/MS 2 1 14317000 7141000 7176200 2112 1708 2390;2391 5481;5482;5483 5371;5372 5372 639 3209;8231 2 GLPWSCSADEVQR EGFVVKVRGLPWSCSA CSADEVQRFFSVFKSN R G L Q R F 1 1 0 1 1 1 1 1 0 0 1 0 0 0 1 2 0 1 0 1 0 0 13 0 1503.6776 E5RGV0;D6RIU0;D6RBM0;E9PCY7;G8JLB6;P31943;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;E7EN40;D6RDU3;D6RJ04;D6RIH9;D6R9D3;D6RF17;D6RDL0 E5RGV0 17 29 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 2 0.011295 72.209 By MS/MS By matching 1 1 13424000 7053800 6370600 2113 753 2392 5484;5485 5373 5373 1362 1 GLQLTPGIGGMQQHFFDDEDR TRRQSVGRGLQLTPGI HFFDDEDRTVPSTPTL R G L D R T 0 1 0 3 0 3 1 4 1 1 2 0 1 2 1 0 1 0 0 0 0 0 21 0 2360.0855 P12270 P12270 2112 2132 TPR Nucleoprotein TPR yes yes 3 0.00010282 110.56 By MS/MS By MS/MS 2 2 290290000 162380000 127910000 2114 1686 2393;2394 5486;5487;5488;5489 5374;5375;5376;5377 5376 625 7389 4 GLQVLMGRMESVFNHAIR VEVIAMIKGLQVLMGR SVFNHAIRHTVYAALQ K G L I R H 1 2 1 0 0 1 1 2 1 1 2 0 2 1 0 1 0 0 0 2 0 0 18 1 2057.0663 A0A0G2JR96;A0A0G2JQT1;Q7L576;A0A0G2JQH3;A0A087WVZ5 A0A0G2JR96 460 477 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes no 3 0.031292 40.187 By MS/MS 1 0 0 0 2115 366 2395 5490 5378 5378 146;147 1 GLRKSDNSR TFVGYTWKGLRKSDNS LRKSDNSRSSDEDSQA K G L S R S 0 2 1 1 0 0 0 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 9 2 1031.5472 Q9UGH3 Q9UGH3 632 640 SLC23A2 Solute carrier family 23 member 2 yes yes 3 0.030293 51.252 By MS/MS 1 26995000 0 26995000 2116 3000 2396 5491 5379 5379 0 GLSARHFLWTCLMTR FCTLAWERGLSARHFL LWTCLMTRSQEEFSIH R G L T R S 1 2 0 0 1 0 0 1 1 0 3 0 1 1 0 1 2 1 0 0 0 0 15 1 1847.9287 A0A087WYG4;Q6ZUA9 A0A087WYG4 1214 1228 MROH5 Maestro heat-like repeat family member 5 yes no 3 0.030899 43.116 By MS/MS 1 0 0 0 2117 124 2397 5492 5380 5380 46 1 GLSASLPDLDSENWIEVK SNLKTLPKGLSASLPD SENWIEVKKRPRPSPA K G L V K K 1 0 1 2 0 0 2 1 0 1 3 1 0 0 1 3 0 1 0 1 0 0 18 0 1971.9789 Q6PKG0;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 544 561 LARP1 La-related protein 1 yes no 2 5.1795E-07 133.93 By MS/MS By MS/MS 1 2 162730000 81457000 81274000 2118 2330 2398 5493;5494;5495 5381;5382;5383 5381 4695 3 GLSEDTTEETLK PSKTLFVKGLSEDTTE DTTEETLKESFDGSVR K G L L K E 0 0 0 1 0 0 3 1 0 0 2 1 0 0 0 1 3 0 0 0 0 0 12 0 1321.6249 P19338;H7BY16 P19338 578 589 NCL Nucleolin yes no 2 0.00045515 112.02 By MS/MS By MS/MS 1 1 82620000 41242000 41378000 2119 1732 2399 5496;5497 5384;5385 5385 3262 2 GLSSSEKDNIER SWVSPRKRGLSSSEKD SEKDNIERQAIENCER R G L E R Q 0 1 1 1 0 0 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 12 1 1333.6474 Q8IYH5 Q8IYH5 87 98 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.017488 74.78 By MS/MS By MS/MS 1 1 75903000 42327000 33576000 2120 2442 2400 5498;5499 5386;5387 5387 4994 2 GLSVDSAQEVK SVSSSIKRGLSVDSAQ VDSAQEVKRFRTATGA R G L V K R 1 0 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 11 0 1131.5772 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1771 1781 TRRAP Transformation/transcription domain-associated protein yes no 2 3.7373E-10 111.12 By MS/MS By MS/MS 1 2 93596000 19482000 74113000 2121 933 2401 5500;5501;5502 5388;5389;5390 5390 1749 2 GLSVDSAQEVKR SVSSSIKRGLSVDSAQ DSAQEVKRFRTATGAI R G L K R F 1 1 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 12 1 1287.6783 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1771 1782 TRRAP Transformation/transcription domain-associated protein yes no 2 0.014136 79.283 By matching By MS/MS 1 1 64874000 36050000 28824000 2122 933 2402 5503;5504 5391 5391 1749 0 GLTQDSNLPSLTQATKVER DCGGHKVKGLTQDSNL TQATKVERRFSLPQDV K G L E R R 1 1 1 1 0 2 1 1 0 0 3 1 0 0 1 2 3 0 0 1 0 0 19 1 2057.0753 A0A1B0GUW6 A0A1B0GUW6 931 949 yes yes 3 0.02701 53.773 By MS/MS 1 0 0 0 2123 422 2403 5505 5392 5392 791;792 1 GLTSVINQK LPCILNARGLTSVINQ LTSVINQKLKDDEVAQ R G L Q K L 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 958.54475 P07195 P07195 300 308 LDHB L-lactate dehydrogenase B chain yes yes 2 0.0097568 101.64 By matching By MS/MS 1 1 18774000 8119200 10655000 2124 1649 2404 5506;5507 5393 5393 1 GLVAAYSGDSDNEEELVER DEENPLKRGLVAAYSG NEEELVERLESEEEKL R G L E R L 2 1 1 2 0 0 4 2 0 0 2 0 0 0 0 2 0 0 1 2 0 0 19 0 2051.9284 P52756 P52756 615 633 RBM5 RNA-binding protein 5 yes yes 2;3 4.2545E-26 144.27 By MS/MS By MS/MS 2 2 76220000 65994000 10226000 2125 1891 2405 5508;5509;5510;5511 5394;5395;5396;5397 5397 3662 3 GLVAAYSGDSDNEEELVERLESEEEK DEENPLKRGLVAAYSG RLESEEEKLADWKKMA R G L E K L 2 1 1 2 0 0 8 2 0 0 3 1 0 0 0 3 0 0 1 2 0 0 26 1 2896.3098 P52756 P52756 615 640 RBM5 RNA-binding protein 5 yes yes 3 2.2678E-07 97.776 By MS/MS By MS/MS 1 1 191210000 102520000 88690000 2126 1891 2406 5512;5513 5398;5399 5399 3662 2 GLVAAYSGESDSEEEQER DDRPSPPRGLVAAYSG DSEEEQERGGPEREEK R G L E R G 2 1 0 1 0 1 5 2 0 0 1 0 0 0 0 3 0 0 1 1 0 0 18 0 1954.8392 A0A0A0MR66;P98175 A0A0A0MR66 792 809 RBM10 RNA-binding protein 10 yes no 2 0.00020893 116.6 By MS/MS By MS/MS 2 2 59734000 28534000 31200000 2127 200 2407 5514;5515;5516;5517 5400;5401;5402;5403;5404;5405 5401 355;356;357 5 GLVGEIIK IKPDGVQRGLVGEIIK GLVGEIIKRFEQKGFR R G L I K R 0 0 0 0 0 0 1 2 0 2 1 1 0 0 0 0 0 0 0 1 0 0 8 0 827.51165 Q32Q12;P22392;E7ERL0;J3KPD9;P15531;C9K028;F6XY72;E5RHP0 Q32Q12 44 51 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A yes no 2 0.028434 80.462 By matching By MS/MS 1 1 7610900 4023200 3587600 2128 1748 2408 5518;5519 5406 5406 1 GLVYETSVLDPDEGIR YGGMRGMKGLVYETSV LDPDEGIRFRGFSIPE K G L I R F 0 1 0 2 0 0 2 2 0 1 2 0 0 0 1 1 1 0 1 2 0 0 16 0 1761.8785 A0A0C4DGI3;B4DJV2;O75390;F8W642;F8VZK9;F8VX07;F8VRP1;F8VX68;F8VPF9;F8VPA1;F8VTT8;F8W1S4;F8W4S1;H0YH82 A0A0C4DGI3 11 26 CS Citrate synthase;Citrate synthase, mitochondrial yes no 2 0.00074281 103.88 By MS/MS By MS/MS 1 1 9860700 4193000 5667700 2129 321 2409 5520;5521 5407;5408 5407 2 GLWSTDSAEEDKETK RRLSGEERGLWSTDSA AEEDKETKRNESKEKY R G L T K R 1 0 0 2 0 0 3 1 0 0 1 2 0 0 0 2 2 1 0 0 0 0 15 1 1694.7635 Q99549;A0A0A0MT47 Q99549 397 411 MPHOSPH8 M-phase phosphoprotein 8 yes no 2 0.0049354 84.62 By MS/MS By MS/MS 1 1 47353000 25307000 22046000 2130 2724 2410 5522;5523 5409;5410 5410 5654 2 GLYDGPVCEVSVTPK AELRGVPRGLYDGPVC CEVSVTPKTVTPASSA R G L P K T 0 0 0 1 1 0 1 2 0 0 1 1 0 0 2 1 1 0 1 3 0 0 15 0 1619.7865 A0A1C7CYX9;Q16555 A0A1C7CYX9 602 616 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 1.4463E-33 177.66 By MS/MS By MS/MS 1 1 62898000 45429000 17469000 2131 435 2411 5524;5525 5411;5412;5413 5413 6960 3 GMAEDYMVLDLSTTSSLQSSSSIHSSR SHLNGYGRGMAEDYMV SSSIHSSRESDAGSDE R G M S R E 1 1 0 2 0 1 1 1 1 1 3 0 2 0 0 9 2 0 1 1 0 0 27 0 2888.3168 B1APH0;Q6ZN30 B1APH0 885 911 BNC2 Zinc finger protein basonuclin-2 yes no 3 0.0034903 54.626 By MS/MS 1 7777100 7777100 0 2132 531 2412 5526 5414 5414 998;999;1000;1001 1 GMGSLDAMDK GIRLKKYRGMGSLDAM GSLDAMDKHLSSQNRY R G M D K H 1 0 0 2 0 0 0 2 0 0 1 1 2 0 0 1 0 0 0 0 0 0 10 0 1023.4365 H0Y4R1;P12268 H0Y4R1 369 378 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 2 0.010365 74.698 By MS/MS By MS/MS 3 3 30123000 15909000 14214000 2133 1121 2413;2414;2415 5527;5528;5529;5530;5531;5532 5415;5416;5417;5418 5416 409;410 2130 3 GMSVYGLGR TNKVASQKGMSVYGLG MSVYGLGRQVYDPKYC K G M G R Q 0 1 0 0 0 0 0 3 0 0 1 0 1 0 0 1 0 0 1 1 0 0 9 0 938.46439 Q15417 Q15417 257 265 CNN3 Calponin-3 yes yes 2 0.0030485 81.191 By MS/MS By MS/MS 2 2 43013000 22402000 20611000 2134 2138 2416;2417 5533;5534;5535;5536 5419;5420;5421 5419 860 8351 3 GMYDGPVFDLTTTPK ADLHAVPRGMYDGPVF FDLTTTPKGGTPAGSA R G M P K G 0 0 0 2 0 0 0 2 0 0 1 1 1 1 2 0 3 0 1 1 0 0 15 0 1640.7756 H0YBT4;Q14195 H0YBT4 136 150 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 2 7.9855E-16 147.26 By MS/MS By MS/MS 2 1 9602000 5327200 4274800 2135 1164 2418 5537;5538;5539 5422;5423;5424 5424 422 7212;7213 3 GNAEGSSDEEGKLVIDEPAK AEGDGDKKGNAEGSSD LVIDEPAKEKNEKGAL K G N A K E 2 0 1 2 0 0 4 3 0 1 1 2 0 0 1 2 0 0 0 1 0 0 20 1 2043.9597 P51858 P51858 127 146 HDGF Hepatoma-derived growth factor yes yes 2;3 7.9505E-06 131.13 By MS/MS By MS/MS 4 4 407570000 197950000 209630000 2136 1881 2419;2420 5540;5541;5542;5543;5544;5545;5546;5547 5425;5426;5427;5428;5429;5430 5430 3645;3646 6 GNAEGSSDEEGKLVIDEPAKEK AEGDGDKKGNAEGSSD IDEPAKEKNEKGALKR K G N E K N 2 0 1 2 0 0 5 3 0 1 1 3 0 0 1 2 0 0 0 1 0 0 22 2 2301.0972 P51858 P51858 127 148 HDGF Hepatoma-derived growth factor yes yes 2;3 1.47E-16 145.86 By MS/MS By MS/MS 3 3 920080000 558070000 362010000 2137 1881 2421;2422 5548;5549;5550;5551;5552;5553 5431;5432;5433;5434;5435 5433 3645;3646 5 GNDPLTSSPGR SSPAQRRRGNDPLTSS PLTSSPGRSSRRTDAL R G N G R S 0 1 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 11 0 1099.5258 P49736;C9J013;C9JZ21;F8WDM3 P49736 20 30 MCM2 DNA replication licensing factor MCM2 yes no 2 6.6633E-21 179.59 By MS/MS By MS/MS 2 2 646550000 321130000 325420000 2138 1857 2423;2424 5554;5555;5556;5557 5436;5437;5438;5439;5440;5441 5438 3579;3580 6 GNDTPLALESTNTEK DIKRKENKGNDTPLAL LESTNTEKETSLEETK K G N E K E 1 0 2 1 0 0 2 1 0 0 2 1 0 0 1 1 3 0 0 0 0 0 15 0 1588.758 Q7Z6Z7 Q7Z6Z7 1719 1733 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0059878 85.493 By MS/MS By MS/MS 1 1 13161000 6708800 6452100 2139 2394 2425 5558;5559 5442;5443 5443 7693 2 GNEPEYEGDDTEGELK IPSPRPSKGNEPEYEG DDTEGELKELESSTDE K G N L K E 0 0 1 2 0 0 5 3 0 0 1 1 0 0 1 0 1 0 1 0 0 0 16 0 1780.7275 F5H1X6;F5H4R1;J3KNB8;F5H538;Q9Y6R4 F5H1X6 437 452 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 yes no 2 0.0062977 82.01 By MS/MS By matching 1 1 20627000 9705700 10922000 2140 963 2426 5560;5561 5444 5444 7133 1 GNFNYIEFTR REAPIDKKGNFNYIEF FNYIEFTRILKHGAKD K G N T R I 0 1 2 0 0 0 1 1 0 1 0 0 0 2 0 0 1 0 1 0 0 0 10 0 1259.5935 O14950;J3QRS3;P19105 O14950 152 161 MYL12B;MYL12A Myosin regulatory light chain 12B;Myosin regulatory light chain 12A yes no 2 0.0069627 100.25 By MS/MS 1 1890900 0 1890900 2141 1462 2427 5562 5445 5445 1 GNIETTSEDGQVFSPK EDDVGIERGNIETTSE DGQVFSPKKGQKKKSI R G N P K K 0 0 1 1 0 1 2 2 0 1 0 1 0 1 1 2 2 0 0 1 0 0 16 0 1707.7952 Q5T200 Q5T200 980 995 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 3.5633E-52 188.16 By MS/MS By MS/MS 2 2 97406000 49587000 47819000 2142 2238 2428;2429 5563;5564;5565;5566 5446;5447;5448;5449 5446 4474 3 GNISFVAFPVSNTNSPTK DQNLSPTKGNISFVAF SNTNSPTKILPKTLGP K G N T K I 1 0 3 0 0 0 0 1 0 1 0 1 0 2 2 3 2 0 0 2 0 0 18 0 1878.9476 F8WAY9;C9JTZ9;Q14188 F8WAY9 28 45 TFDP2 Transcription factor Dp-2 yes no 2 0.015426 62.081 By matching By MS/MS 1 1 10857000 6027000 4830000 2143 695 2430 5567;5568 5450 5450 1290;7040 1 GNKSYLEGSSDNQLK SRTSSQSKGNKSYLEG GSSDNQLKDSESTPVD K G N L K D 0 0 2 1 0 1 1 2 0 0 2 2 0 0 0 3 0 0 1 0 0 0 15 1 1638.7849 E9PJ60;Q9UHI6 E9PJ60 277 291 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.025495 50.874 By MS/MS By matching 1 1 10258000 6179600 4078200 2144 887 2431 5569;5570 5451 5451 1647;1648;1649 1 GNLANVIR QGVLSFWRGNLANVIR GNLANVIRYFPTQALN R G N I R Y 1 1 2 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 855.49265 P12236;P05141;P12235;V9GYG0;Q9H0C2 P12236 73 80 SLC25A6;SLC25A5;SLC25A4;SLC25A31 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed yes no 2 0.02728 82.305 By MS/MS By matching 1 1 14191000 7150100 7041100 2145 1639 2432 5571;5572 5452 5452 1 GNLATAQAAILAALMRSGPPGPACFSR G N S R 7 2 1 0 1 1 0 3 0 1 3 0 1 1 3 2 1 0 0 0 0 0 27 1 2697.3843 REV__Q8IY67 yes no 3 0.032356 43.523 By matching By MS/MS 1 2 19029000 10352000 8677000 + 2146 3164 2433 5573;5574;5575 5453 5453 1255 1 GNLNLSPTSPETMAGPVPTSPVR VWNKIQKRGNLNLSPT PVPTSPVRSSIGTAPP R G N V R S 1 1 2 0 0 0 1 2 0 0 2 0 1 0 5 3 3 0 0 2 0 0 23 0 2321.1685 Q7Z7G8 Q7Z7G8 1244 1266 VPS13B Vacuolar protein sorting-associated protein 13B yes yes 2 0.0036777 64.522 By matching By MS/MS 1 1 7341900 4306500 3035400 2147 2395 2434 5576;5577 5454 5454 973 4889;7694 1 GNLVRSNQMDEAEQYTR RTPWNKAKGNLVRSNQ DEAEQYTRPIQVSLCR K G N T R P 1 2 2 1 0 2 2 1 0 0 1 0 1 0 0 1 1 0 1 1 0 0 17 1 2009.9225 Q17RG1 Q17RG1 553 569 KCTD19 BTB/POZ domain-containing protein KCTD19 yes yes 2 0.031955 51.463 By MS/MS 1 0 0 0 2148 2171 2435 5578 5455 5455 870 1 GNPTVEVDLFTSK AREIFDSRGNPTVEVD EVDLFTSKGLFRAAVP R G N S K G 0 0 1 1 0 0 1 1 0 0 1 1 0 1 1 1 2 0 0 2 0 0 13 0 1405.7089 P06733;K7EM90 P06733 16 28 ENO1 Alpha-enolase;Enolase yes no 2 0.0027308 92.943 By matching By MS/MS 1 1 14003000 7552800 6450200 2149 1646 2436 5579;5580 5456 5456 1 GNRVSPTMK SKNGKTKKGNRVSPTM NRVSPTMKVTHFLPRL K G N M K V 0 1 1 0 0 0 0 1 0 0 0 1 1 0 1 1 1 0 0 1 0 0 9 1 988.5124 P08620 P08620 190 198 FGF4 Fibroblast growth factor 4 yes yes 1 0.029755 45.081 By MS/MS 1 4660900 4660900 0 2150 1660 2437 5581 5457 5457 612 0 GNSDGYIIPINK QMCYQISRGNSDGYII GYIIPINKEGCIPEGD R G N N K E 0 0 2 1 0 0 0 2 0 3 0 1 0 0 1 1 0 0 1 0 0 0 12 0 1289.6616 H0Y3V3;H0Y5C0;B1ALU1;B1ALU3;O95490 H0Y3V3 440 451 ADGRL2;LPHN2 Latrophilin-2 yes no 2 1.9037E-19 170.89 By MS/MS By MS/MS 3 3 32319000 19428000 12891000 2151 528 2438;2439 5582;5583;5584;5585;5586;5587 5458;5459;5460;5461;5462;5463 5458 991;8067 5 GNSLSANPWPSAQR PASMPQSKGNSLSANP NPWPSAQREQSSQLAR K G N Q R E 2 1 2 0 0 1 0 1 0 0 1 0 0 0 2 3 0 1 0 0 0 0 14 0 1483.7168 E9PMA8 E9PMA8 17 30 MAP2K3 yes yes 2 0.0087788 74.649 By MS/MS By matching 1 1 36568000 20062000 16505000 2152 911 2440 5588;5589 5464 5464 1690 1 GNSRPGTPSAEGGSTSSTLR KPSGGSSRGNSRPGTP GSTSSTLRAAASKLEQ R G N L R A 1 2 1 0 0 0 1 4 0 0 1 0 0 0 2 5 3 0 0 0 0 0 20 1 1917.914 M0QXD6;P35269 M0QXD6 299 318 GTF2F1 General transcription factor IIF subunit 1 yes no 3 5.335E-05 98.727 By matching By MS/MS 2 2 109000000 60691000 48312000 2153 1398 2441;2442 5590;5591;5592;5593 5465;5466 5465 2569;7269 2 GNVVPSPLPTRR ERSPSPLRGNVVPSPL PSPLPTRRTRTFSATV R G N R R T 0 2 1 0 0 0 0 1 0 0 1 0 0 0 3 1 1 0 0 2 0 0 12 1 1291.7361 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 36 47 CARHSP1 Calcium-regulated heat stable protein 1 yes no 3 0.021564 57.328 By MS/MS By matching 1 1 14837000 7791200 7045700 2154 1236 2443 5594;5595 5467 5467 2310 0 GPAADPSSPGTSGVGPAAGAGDSR SSPNQAVRGPAADPSS AAGAGDSRLCLPQRAQ R G P S R L 5 1 0 2 0 0 0 6 0 0 0 0 0 0 4 4 1 0 0 1 0 0 24 0 2037.9352 A0A0U1RRM4 A0A0U1RRM4 148 171 yes yes 2;3 0.0009031 67.899 By MS/MS By MS/MS 2 3 42000000 18152000 23847000 2155 399 2444 5596;5597;5598;5599;5600 5468;5469;5470;5471 5469 736;737;738;6946 4 GPAGDATVASEKESVM NPLLKHYRGPAGDATV ASEKESVM________ R G P V M - 3 0 0 1 0 0 2 2 0 0 0 1 1 0 1 2 1 0 0 2 0 0 16 1 1547.7137 M0QXM4;Q15758 M0QXM4 350 365 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) yes no 2 0.00045045 98.508 By MS/MS By matching 1 1 11692000 5140300 6551700 2156 1402 2445 5601;5602 5472 5472 487 2577 1 GPAGEAGASPPVR PSPPAPPRGPAGEAGA AGASPPVRRVRVVKQE R G P V R R 3 1 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 13 0 1164.5887 Q13425;A0A140TA73 Q13425 102 114 SNTB2 Beta-2-syntrophin yes no 2 1.724E-10 143.31 By MS/MS By MS/MS 1 1 61658000 34275000 27383000 2157 2058 2446 5603;5604 5473;5474;5475;5476;5477 5477 4051 5 GPAGEAGASPPVRR PSPPAPPRGPAGEAGA GASPPVRRVRVVKQEA R G P R R V 3 2 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 14 1 1320.6898 Q13425;A0A140TA73 Q13425 102 115 SNTB2 Beta-2-syntrophin yes no 2 0.0036761 85.287 By matching By MS/MS 1 1 61372000 28922000 32450000 2158 2058 2447 5605;5606 5478 5478 4051 1 GPALTPIRDEEWGGHSPR DWRSRPSRGPALTPIR EWGGHSPRSPRGWDQE R G P P R S 1 2 0 1 0 0 2 3 1 1 1 0 0 0 3 1 1 1 0 0 0 0 18 1 1973.9708 S4R3V8;Q86X29 S4R3V8 401 418 LSR Lipolysis-stimulated lipoprotein receptor yes no 3 0.00088059 78.191 By MS/MS By MS/MS 1 1 8879700 4764300 4115400 2159 2416 2448 5607;5608 5479;5480 5479 4931 1 GPAPAPQQCSEPETK AEVAAPTKGPAPAPQQ QCSEPETKWSSIPASK K G P T K W 2 0 0 0 1 2 2 1 0 0 0 1 0 0 4 1 1 0 0 0 0 0 15 0 1595.725 H0Y4Z8;Q3YEC7;A0A0X1KG72;G3V154 H0Y4Z8 484 498 RABL6 Rab-like protein 6 yes no 2 0.01657 64.842 By matching By MS/MS 1 1 14454000 6096300 8357500 2160 1124 2449 5609;5610 5481 5481 2134 0 GPASDSETEDASR SESEGPQKGPASDSET SETEDASRHKQKPESD K G P S R H 2 1 0 2 0 0 2 1 0 0 0 0 0 0 1 3 1 0 0 0 0 0 13 0 1320.543 Q96ST2 Q96ST2 310 322 IWS1 Protein IWS1 homolog yes yes 2 4.4654E-09 135.86 By MS/MS By MS/MS 3 4 75153000 33159000 41994000 2161 2711 2450 5611;5612;5613;5614;5615;5616;5617 5482;5483;5484;5485;5486;5487;5488 5487 5597;5598;7809 7 GPASPLEAK FDPLSQSRGPASPLEA PASPLEAKKKDSPEEK R G P A K K 2 0 0 0 0 0 1 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 0 868.46543 Q13099 Q13099 130 138 IFT88 Intraflagellar transport protein 88 homolog yes yes 2 0.021073 65.719 By MS/MS By MS/MS 1 1 11695000 6516100 5178500 2162 2039 2451 5618;5619 5489;5490 5490 4004 2 GPASQFYITPSTSLSPR SKWGMIPRGPASQFYI PSTSLSPRQSGPQWKG R G P P R Q 1 1 0 0 0 1 0 1 0 1 1 0 0 1 3 4 2 0 1 0 0 0 17 0 1807.9105 H0YIQ2;P49750 H0YIQ2 368 384 YLPM1 YLP motif-containing protein 1 yes no 2 1.271E-52 188.96 By MS/MS By MS/MS 1 1 41427000 24870000 16558000 2163 1192 2452 5620;5621 5491;5492;5493 5492 2233;2234 3 GPASTPTYSPAPTQPAPR PPPVAIGKGPASTPTY APTQPAPRIASAPEPR K G P P R I 3 1 0 0 0 1 0 1 0 0 0 0 0 0 6 2 3 0 1 0 0 0 18 0 1794.8901 K7EJY5;Q6P1N0 K7EJY5 46 63 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes no 2 0.00075748 96.059 By MS/MS By MS/MS 1 1 19313000 10792000 8521400 2164 1375 2453 5622;5623 5494;5495 5495 8169 1 GPEEEEIGSPEPMAAPASASQKLSPLQK PPEAKRARGPEEEEIG QKLSPLQKLSSMDPAM R G P Q K L 4 0 0 0 0 2 5 2 0 1 2 2 1 0 5 4 0 0 0 0 0 0 28 1 2877.4066 H3BRB3;Q14807 H3BRB3 336 363 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 yes no 3 9.6029E-10 94.301 By MS/MS By MS/MS 2 2 51441000 20891000 30550000 2165 1246 2454;2455 5624;5625;5626;5627 5496;5497;5498 5497 449 2323;2324;2325;2326 2 GPETEGEDASPSALVVGPPETK AAVGLSNRGPETEGED VVGPPETKEEGEKRES R G P T K E 2 0 0 1 0 0 4 3 0 0 1 1 0 0 4 2 2 0 0 2 0 0 22 0 2166.0328 A0A1B0GTL5 A0A1B0GTL5 929 950 yes yes 2 0.02391 54.047 By matching By MS/MS 1 1 8549500 3691200 4858400 2166 410 2456 5628;5629 5499 5499 755 1 GPGAPGLAHLQESQAGSDTDVEEGK IFHGVGTRGPGAPGLA DTDVEEGKAPQAVPLE R G P G K A 3 0 0 2 0 2 3 5 1 0 2 1 0 0 2 2 1 0 0 1 0 0 25 0 2449.1357 Q14676 Q14676 360 384 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 1.0562E-05 83.557 By matching By MS/MS 1 1 35433000 18271000 17162000 2167 2098 2457 5630;5631 5500 5500 4141;4142;7578 1 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK IFHGVGTRGPGAPGLA PQAVPLEKSQASMVIN R G P E K S 5 0 0 2 0 3 4 5 1 0 3 2 0 0 4 2 1 0 0 2 0 0 34 1 3382.6641 Q14676 Q14676 360 393 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3;4 1.7821E-09 86.076 By MS/MS By MS/MS 2 2 423270000 214380000 208890000 2168 2098 2458 5632;5633;5634;5635 5501;5502;5503 5502 4141;4142;7578 3 GPGEPDSPTPLHPPTPPILSTDR IIPAPKPKGPGEPDSP PPILSTDRSREDSPEL K G P D R S 0 1 0 2 0 0 1 2 1 1 2 0 0 0 8 2 3 0 0 0 0 0 23 0 2377.1914 Q03164 Q03164 1831 1853 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 2.2251E-05 102.92 By MS/MS By MS/MS 2 2 65182000 29736000 35446000 2169 1994 2459;2460 5636;5637;5638;5639 5504;5505;5506;5507;5508 5506 3837 5 GPGQPSSPQRLDR RGGGKGRKGPGQPSSP SSPQRLDRLSGLADQM K G P D R L 0 2 0 1 0 2 0 2 0 0 1 0 0 0 3 2 0 0 0 0 0 0 13 1 1393.7062 O95400 O95400 189 201 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 2 0.01929 73.386 By MS/MS By matching 1 1 18489000 8755300 9733400 2170 1594 2461 5640;5641 5509 5509 3019;3020 1 GPGQVPTATSALSLELQEVEPLGLPQASPSR PADKLTPKGPGQVPTA LPQASPSRTRSPDVIS K G P S R T 3 1 0 0 0 3 3 3 0 0 5 0 0 0 5 4 2 0 0 2 0 0 31 0 3128.6354 Q6P2E9 Q6P2E9 696 726 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 3 2.9019E-10 108.55 By MS/MS By MS/MS 1 1 55572000 32433000 23139000 2171 2317 2462 5642;5643 5510;5511 5511 4677 2 GPGSPPRTPPAPGPPSFEEQLR LQLSTEPRGPGSPPRT PSFEEQLRLALELSSR R G P L R L 1 2 0 0 0 1 2 3 0 0 1 0 0 1 8 2 1 0 0 0 0 0 22 1 2270.1444 Q6ZTN6 Q6ZTN6 462 483 ANKRD13D Ankyrin repeat domain-containing protein 13D yes yes 3 0.0013374 85.537 By MS/MS By MS/MS 1 1 19101000 8294400 10806000 2172 2353 2463 5644;5645 5512;5513 5512 4773;7676 2 GPIAQWADGAISPNGHRPQLR TEDMSVPRGPIAQWAD NGHRPQLRAASGEDST R G P L R A 3 2 1 1 0 2 0 3 1 2 1 0 0 0 3 1 0 1 0 0 0 0 21 1 2240.1563 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6;A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1;Q5SRD0 F8W7U3 976 996 FAM21A;FAM21C;FAM21D WASH complex subunit FAM21A;WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 no no 3 0.0094825 57.152 By MS/MS By matching 1 1 15608000 7886700 7721600 2173 814;183 2464 5646;5647 5514 5514 309 1 GPKEPGFEAGPEASDDDLWTR GRKARKLRGPKEPGFE SDDDLWTRRRSERIFL R G P T R R 2 1 0 3 0 0 3 3 0 0 1 1 0 1 3 1 1 1 0 0 0 0 21 1 2273.0237 H9KVB4;O15417;H7C177 H9KVB4 1976 1996 TNRC18 Trinucleotide repeat-containing gene 18 protein yes no 3 0.014492 59.661 By MS/MS By MS/MS 1 1 9055000 4430500 4624400 2174 1296 2465 5648;5649 5515;5516 5516 2401 0 GPLSPFNSR SSSWLNVKGPLSPFNS PLSPFNSRAAAGPAHH K G P S R A 0 1 1 0 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 0 0 9 0 973.49813 A1L390;A0A0U1RR71;G3V3I3;G3V278 A1L390 73 81 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.012046 75.416 By MS/MS By MS/MS 1 1 11185000 6108800 5076300 2175 445 2466 5650;5651 5517;5518;5519 5519 829 3 GPNGRDPLLEVYDVPPSVEK DTPPMAVKGPNGRDPL DVPPSVEKGLPPSNHH K G P E K G 0 1 1 2 0 0 2 2 0 0 2 1 0 0 4 1 0 0 1 3 0 0 20 1 2180.1113 P56945 P56945 276 295 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 3 0.020572 45.469 By MS/MS 1 4381500 4381500 0 2176 1919 2467 5652 5520 5520 8305 1 GPPDFSSDEEREPTPVLGSGAAAAGR LPAGTNSKGPPDFSSD SGAAAAGRSRAAVGRK K G P G R S 4 2 0 2 0 0 3 4 0 0 1 0 0 1 4 3 1 0 0 1 0 0 26 1 2569.2045 P42166;G5E972;P42167 G5E972 61 86 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 3;4 7.2736E-08 122.35 By MS/MS By MS/MS 6 8 1965100000 899920000 1065200000 2177 1097;1823 2468;2469;2470 5653;5654;5655;5656;5657;5658;5659;5660;5661;5662;5663;5664;5665;5666 5521;5522;5523;5524;5525;5526;5527;5528;5529;5530;5531;5532;5533;5534;5535;5536;5537;5538;5539;5540;5541;5542;5543;5544;5545;5546;5547;5548;5549;5550;5551;5552;5553;5554;5555;5556;5557 5542 2061;2062;7183 36 GPPQSPVFEGVYNNSR ARGQSTGKGPPQSPVF EGVYNNSRMLHFLTAV K G P S R M 0 1 2 0 0 1 1 2 0 0 0 0 0 1 3 2 0 0 1 2 0 0 16 0 1746.8325 Q8WWM7;H3BUF6;H3BSK9 Q8WWM7 107 122 ATXN2L Ataxin-2-like protein yes no 2;3 6.2985E-05 119.04 By MS/MS By MS/MS 3 2 94800000 56314000 38487000 2178 2564 2471 5667;5668;5669;5670;5671 5558;5559;5560;5561;5562;5563;5564;5565;5566;5567 5565 5241 10 GPPSPPAPVMHSPSR KINKKIPRGPPSPPAP PVMHSPSRKMTVKEQQ R G P S R K 1 1 0 0 0 0 0 1 1 0 0 0 1 0 6 3 0 0 0 1 0 0 15 0 1512.7507 G3V3A4;Q13573;G3V4X8 G3V3A4 221 235 SNW1 SNW domain-containing protein 1 yes no 2;3 0.00011608 111.7 By MS/MS By MS/MS 2 2 78323000 38765000 39559000 2179 1072 2472 5672;5673;5674;5675 5568;5569;5570;5571;5572;5573;5574;5575;5576;5577;5578 5569 387 2031;2032;2033 11 GPPSPPAPVMHSPSRK KINKKIPRGPPSPPAP VMHSPSRKMTVKEQQE R G P R K M 1 1 0 0 0 0 0 1 1 0 0 1 1 0 6 3 0 0 0 1 0 0 16 1 1640.8457 G3V3A4;Q13573;G3V4X8 G3V3A4 221 236 SNW1 SNW domain-containing protein 1 yes no 3 0.00024007 102.61 By MS/MS By MS/MS 2 2 133720000 68585000 65131000 2180 1072 2473;2474 5676;5677;5678;5679 5579;5580;5581;5582;5583;5584;5585;5586 5584 387 2031;2032;2033 8 GPQPPTVSPIR QKQNDTPKGPQPPTVS PPTVSPIRSSRPPPAK K G P I R S 0 1 0 0 0 1 0 1 0 1 0 0 0 0 4 1 1 0 0 1 0 0 11 0 1147.635 P46087 P46087 779 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2;3 0.00014307 116.71 By MS/MS By MS/MS 2 1 450300000 242300000 208000000 2181 1836 2475 5680;5681;5682 5587;5588;5589;5590;5591 5590 3471;7447 5 GPRTPPITTK AQQSKKKRGPRTPPIT RTPPITTKEELVEMCN R G P T K E 0 1 0 0 0 0 0 1 0 1 0 1 0 0 3 0 3 0 0 0 0 0 10 1 1066.6135 Q5T200 Q5T200 1030 1039 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 0.0046275 75.483 By MS/MS By matching 1 1 13937000 8449400 5487900 2182 2238 2476 5683;5684 5592 5592 7643 1 GPRTPSPPPPIPEDIALGK KTNQSKKKGPRTPSPP PEDIALGKKYKEKYKV K G P G K K 1 1 0 1 0 0 1 2 0 2 1 1 0 0 7 1 1 0 0 0 0 0 19 1 1938.0575 Q5T200 Q5T200 260 278 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 0.0052129 82.885 By MS/MS By MS/MS 1 1 18805000 9152100 9652600 2183 2238 2477 5685;5686 5593;5594;5595 5595 4475;7644 3 GPSHPLDLGTSSPNTSQIHWTPYR GPALSHSRGPSHPLDL QIHWTPYRAMYQYRPQ R G P Y R A 0 1 1 1 0 1 0 2 2 1 2 0 0 0 4 4 3 1 1 0 0 0 24 0 2647.2779 H0YAZ3;O60504 H0YAZ3 107 130 SORBS3 Vinexin yes no 3 7.6021E-07 97.69 By MS/MS By MS/MS 1 1 36678000 15699000 20979000 2184 1160 2478 5687;5688 5596;5597 5596 2201;2202 2 GPSPAPASSPKR RLDKSDPRGPSPAPAS APASSPKREVLYDSEG R G P K R E 2 1 0 0 0 0 0 1 0 0 0 1 0 0 4 3 0 0 0 0 0 0 12 1 1150.6095 Q9H7N4 Q9H7N4 717 728 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.0032737 86.467 By MS/MS 1 3630700 0 3630700 2185 2849 2479 5689 5598 5598 5998 1 GPSPSPVGSPASVAQSR SPHLPGIRGPSPSPVG PASVAQSRSGPLSPAA R G P S R S 2 1 0 0 0 1 0 2 0 0 0 0 0 0 4 5 0 0 0 2 0 0 17 0 1579.7954 O14497;H0Y488;A0A1B0GTU5;A0A087WUV6 O14497 694 710 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 1.8388E-06 128.82 By MS/MS By MS/MS 2 2 80251000 33447000 46805000 2186 1448 2480;2481 5690;5691;5692;5693 5599;5600;5601;5602;5603 5600 2662;2663 5 GPSPSSPTPPAAAAPAEQAPR LPGPGAARGPSPSSPT APAEQAPRAKGRPRRS R G P P R A 6 1 0 0 0 1 1 1 0 0 0 0 0 0 7 3 1 0 0 0 0 0 21 0 1955.9701 Q86VQ1 Q86VQ1 103 123 GLCCI1 Glucocorticoid-induced transcript 1 protein yes yes 3 0.010622 64.5 By MS/MS By matching 1 1 6714700 3202100 3512600 2187 2409 2482 5694;5695 5604 5604 4911;7698 0 GPSPTPEDVSMKEENLCQAFSDALLCK QMEKLAPKGPSPTPED FSDALLCKIEDIDNED K G P C K I 2 0 1 2 2 1 3 1 0 0 3 2 1 1 3 3 1 0 0 1 0 0 27 1 3022.3722 H1UBN3;O95067 H1UBN3 90 116 CCNB2V;CCNB2 G2/mitotic-specific cyclin-B2 yes no 3 0.0011408 63.479 By MS/MS 1 8703400 0 8703400 2188 1221 2483 5696 5605 5605 440 2282;7224 1 GPSSVEDIK EKTPKTPKGPSSVEDI PSSVEDIKAKMQASIE K G P I K A 0 0 0 1 0 0 1 1 0 1 0 1 0 0 1 2 0 0 0 1 0 0 9 0 930.46583 P06748 P06748 240 248 NPM1 Nucleophosmin yes yes 2 0.0094377 100.02 By MS/MS By MS/MS 1 1 61583000 31327000 30256000 2189 1647 2484 5697;5698 5606;5607 5606 2 GPSTPKSPGASNFSTLPK NEDGTWPRGPSTPKSP SNFSTLPKISPSSLSN R G P P K I 1 0 1 0 0 0 0 2 0 0 1 2 0 1 4 4 2 0 0 0 0 0 18 1 1771.9105 Q9Y4E8 Q9Y4E8 223 240 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2;3 0.00036067 108.34 By MS/MS By MS/MS 4 4 55673000 28740000 26933000 2190 3119 2485;2486 5699;5700;5701;5702;5703;5704;5705;5706 5608;5609;5610;5611;5612;5613 5612 6682;6683;7950 6 GPSWDPFR RVPFSLLRGPSWDPFR GPSWDPFRDWYPHSRL R G P F R D 0 1 0 1 0 0 0 1 0 0 0 0 0 1 2 1 0 1 0 0 0 0 8 0 960.44537 F8WE04;P04792 F8WE04 13 20 HSPB1 Heat shock protein beta-1 yes no 2 0.013109 80.916 By MS/MS 1 9420000 0 9420000 2191 1055 2487 5707 5614 5614 1994 1 GPSWDPFRDWYPHSR RVPFSLLRGPSWDPFR RDWYPHSRLFDQAFGL R G P S R L 0 2 0 2 0 0 0 1 1 0 0 0 0 1 3 2 0 2 1 0 0 0 15 1 1901.8598 F8WE04;P04792 F8WE04 13 27 HSPB1 Heat shock protein beta-1 yes no 3 0.0070889 63.436 By MS/MS 1 6249900 0 6249900 2192 1055 2488 5708 5615 5615 1994 1 GPTSTSIDNIDGTPVRDER SHPSDFQRGPTSTSID GTPVRDERSGTPTQDE R G P E R S 0 2 1 3 0 0 1 2 0 2 0 0 0 0 2 2 3 0 0 1 0 0 19 1 2028.9712 Q5VT52 Q5VT52 711 729 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2;3 0.00020846 119.66 By MS/MS By MS/MS 2 1 132910000 89930000 42977000 2193 2264 2489 5709;5710;5711 5616;5617;5618 5616 7650 3 GPTTGEGALDLSDVHSPPKSPEGK RRCQQKEKGPTTGEGA PPKSPEGKTSAQTTPS K G P G K T 1 0 0 2 0 0 2 4 1 0 2 2 0 0 4 3 2 0 0 1 0 0 24 1 2375.1605 O95684 O95684 141 164 FGFR1OP FGFR1 oncogene partner yes yes 3 1.3132E-05 85.737 By MS/MS By MS/MS 1 1 38015000 16788000 21227000 2194 1605 2490 5712;5713 5619;5620 5620 3040;3041;3042 2 GPVRSEDESVEAK AVKQISDRGPVRSEDE EDESVEAKRERPSGPE R G P A K R 1 1 0 1 0 0 3 1 0 0 0 1 0 0 1 2 0 0 0 2 0 0 13 1 1401.6736 Q9UMN6 Q9UMN6 840 852 KMT2B Histone-lysine N-methyltransferase 2B yes yes 2 0.0022656 93.478 By MS/MS By matching 1 1 10300000 4890500 5409900 2195 3054 2491 5714;5715 5621 5621 6440 1 GPVSGTEPEPVYSMEAADYR FKAELSYRGPVSGTEP SMEAADYREASSQQGL R G P Y R E 2 1 0 1 0 0 3 2 0 0 0 0 1 0 3 2 1 0 2 2 0 0 20 0 2153.9575 Q14247;H0YEV2;H0YCD9 Q14247 435 454 CTTN Src substrate cortactin yes no 2;3 2.0313E-72 199.38 By MS/MS By MS/MS 8 8 1795300000 882590000 912740000 2196 2087 2492;2493;2494;2495 5716;5717;5718;5719;5720;5721;5722;5723;5724;5725;5726;5727;5728;5729;5730;5731 5622;5623;5624;5625;5626;5627;5628;5629;5630;5631;5632;5633;5634;5635;5636;5637;5638;5639;5640;5641;5642;5643;5644;5645;5646;5647;5648;5649;5650;5651;5652 5628 832 4122;8338;8339 31 GPVSPSVSFQPLAR TSSLTPSRGPVSPSVS VSFQPLARSTPRASRL R G P A R S 1 1 0 0 0 1 0 1 0 0 1 0 0 1 3 3 0 0 0 2 0 0 14 0 1440.7725 Q7Z434 Q7Z434 219 232 MAVS Mitochondrial antiviral-signaling protein yes yes 2;3 4.6234E-11 141.06 By MS/MS By MS/MS 1 2 132600000 67516000 65086000 2197 2382 2496 5732;5733;5734 5653;5654;5655 5654 4839;4840 3 GQAGLPGGLVSPGSGDR EELKATTRGQAGLPGG VSPGSGDRAQRLGHSL R G Q D R A 1 1 0 1 0 1 0 6 0 0 2 0 0 0 2 2 0 0 0 1 0 0 17 0 1523.7692 Q9P266 Q9P266 1294 1310 KIAA1462 Junctional protein associated with coronary artery disease yes yes 2 0.027942 58.781 By MS/MS By matching 1 1 13570000 6406200 7163800 2198 2973 2497 5735;5736 5656 5656 6262 1 GQASSPTPEPGVGAGDLPGPTSAPVPSGSQSGGRGSPVSPR EGGSQDQKGQASSPTP RGSPVSPRRHQKGLLN K G Q P R R 3 2 0 1 0 2 1 9 0 0 1 0 0 0 9 8 2 0 0 3 0 0 41 1 3738.8198 Q14676 Q14676 960 1000 MDC1 Mediator of DNA damage checkpoint protein 1 no no 1 NaN 0 0 0 2199 2098 0 GQDVVQEWQETSPTREEPAGEQK EQEEKYWRGQDVVQEW EEPAGEQKELAPAWED R G Q Q K E 1 1 0 1 0 4 5 2 0 0 0 1 0 0 2 1 2 1 0 2 0 0 23 1 2627.21 E9PGC8;P78559 E9PGC8 1881 1903 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 3 0.00049858 73.346 By MS/MS By MS/MS 1 1 60077000 35598000 24478000 2200 872 2498 5737;5738 5657;5658 5658 1608 2 GQEYLILEK GHDLRLERGQEYLILE QEYLILEKNDVHWWRA R G Q E K N 0 0 0 0 0 1 2 1 0 1 2 1 0 0 0 0 0 0 1 0 0 0 9 0 1091.5863 P42680 P42680 203 211 TEC Tyrosine-protein kinase Tec yes yes 2 0.0050321 93.178 By MS/MS 1 0 0 0 2201 1827 2499 5739 5659 5659 8263 1 GQGESDPLDHEPAVSPLLPR VPEMPHSKGQGESDPL AVSPLLPRKERGPPEG K G Q P R K 1 1 0 2 0 1 2 2 1 0 3 0 0 0 4 2 0 0 0 1 0 0 20 0 2113.044 P00519 P00519 555 574 ABL1 Tyrosine-protein kinase ABL1 yes yes 3 0.023032 44.933 By MS/MS By MS/MS 1 1 23520000 11293000 12226000 2202 1625 2500 5740;5741 5660;5661 5660 3067 2 GQLERSPSGSAFGSQENLR QEMVRRSRGQLERSPS FGSQENLRWRKDMTHW R G Q L R W 1 2 1 0 0 2 2 3 0 0 2 0 0 1 1 4 0 0 0 0 0 0 19 1 2018.977 A0A1B0GWE0 A0A1B0GWE0 516 534 yes yes 3 0.00051529 82.709 By MS/MS By MS/MS 1 1 14994000 8678700 6315400 2203 433 2501 5742;5743 5662;5663;5664 5664 807;808;809 2 GQNGSFDAPNERPYSLK RGQHYHQKGQNGSFDA NERPYSLKIRNTTSCN K G Q L K I 1 1 2 1 0 1 1 2 0 0 1 1 0 1 2 2 0 0 1 0 0 0 17 1 1878.886 A0A087WX61;Q01151 A0A087WX61 18 34 CD83 CD83 antigen yes no 3 0.0085862 66.732 By MS/MS 1 7657800 0 7657800 2204 101 2502 5744 5665 5665 180;181 0 GQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYER PQAAASYRGQPGNAYD STPPPYERTRLSPPRA R G Q E R T 7 1 3 1 0 3 1 5 0 0 1 0 1 0 5 4 1 0 3 1 0 0 37 0 3693.6754 Q96PK6 Q96PK6 542 578 RBM14 RNA-binding protein 14 yes yes 3;4 9.8698E-06 62.827 By MS/MS By MS/MS 1 2 91158000 21187000 69971000 2205 2696 2503 5745;5746;5747 5666;5667 5666 1071 5565;7803 1 GQPKVFAYDHCFWSMDESVK NLSKGDARGQPKVFAY WSMDESVKEKYAGQDI R G Q V K E 1 0 0 2 1 1 1 1 1 0 0 2 1 2 1 2 0 1 1 2 0 0 20 1 2430.0773 E7ERX9;Q9NQT8 E7ERX9 51 70 KIF13B Kinesin-like protein;Kinesin-like protein KIF13B yes no 3 0.029822 44.577 By MS/MS 1 0 0 0 2206 812 2504 5748 5668 5668 303 1 GQSQLSNPTDDSWK IDKNPSERGQSQLSNP NPTDDSWKGRPYANQK R G Q W K G 0 0 1 2 0 2 0 1 0 0 1 1 0 0 1 3 1 1 0 0 0 0 14 0 1561.7009 Q9Y6D5 Q9Y6D5 1523 1536 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 3.1766E-07 132.15 By MS/MS By MS/MS 1 1 21497000 8708800 12789000 2207 3147 2505 5749;5750 5669;5670;5671 5670 6735 3 GQTPLTEGSEDLDGHSDPEESFAR NGTFNLSRGQTPLTEG DPEESFARDLPDFPSI R G Q A R D 1 1 0 3 0 1 4 3 1 0 2 0 0 1 2 3 2 0 0 0 0 0 24 0 2573.1154 K7EQI9;Q86VR2 K7EQI9 208 231 FAM134C Protein FAM134C yes no 3 0.0014021 62.303 By MS/MS By MS/MS 1 1 51727000 24020000 27707000 2208 1391 2506 5751;5752 5672;5673 5672 2560;2561 2 GQVQMSDPRAPIPR VGPVPLERGQVQMSDP DPRAPIPRGPVTPGGL R G Q P R G 1 2 0 1 0 2 0 1 0 1 0 0 1 0 3 1 0 0 0 1 0 0 14 1 1550.7987 Q9H0L4 Q9H0L4 303 316 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 3 0.027083 48.623 By matching By MS/MS 1 1 20408000 10369000 10039000 2209 2805 2507 5753;5754 5674 5674 5868 1 GRAEGEWEDQEALDYFSDKESGK SKEKGSEKGRAEGEWE FSDKESGKQKFNDSEG K G R G K Q 2 1 0 3 0 1 5 3 0 0 1 2 0 1 0 2 0 1 1 0 0 0 23 2 2645.1518 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 369 391 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3;4 7.0766E-47 175.23 By MS/MS By MS/MS 3 2 275320000 155010000 120310000 2210 2947 2508 5755;5756;5757;5758;5759 5675;5676;5677;5678;5679;5680;5681 5676 6211;6212 6 GRDSPYQSR SRSRSGSRGRDSPYQS RDSPYQSRGSPHYFSP R G R S R G 0 2 0 1 0 1 0 1 0 0 0 0 0 0 1 2 0 0 1 0 0 0 9 1 1064.4999 Q13242 Q13242 201 209 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 2;3 0.0011162 122.46 By MS/MS By MS/MS 4 4 107460000 59514000 47949000 2211 2051 2509 5760;5761;5762;5763;5764;5765;5766;5767 5682;5683;5684;5685;5686;5687;5688;5689;5690;5691;5692;5693 5685 4025;8327 12 GRDYCSEEEDIT MLDEKIEKGRDYCSEE CSEEEDIT________ K G R I T - 0 1 0 2 1 0 3 1 0 1 0 0 0 0 0 1 1 0 1 0 0 0 12 1 1472.5726 Q9H246 Q9H246 110 121 C1orf21 Uncharacterized protein C1orf21 yes yes 2 0.005718 85.287 By MS/MS By MS/MS 1 1 28591000 17196000 11395000 2212 2817 2510 5768;5769 5694;5695 5694 5899 2 GREDVSNFDDEFTSEAPILTPPREPR PPFIPTIRGREDVSNF LTPPREPRILSEEEQE R G R P R I 1 3 1 3 0 0 4 1 0 1 1 0 0 2 4 2 2 0 0 1 0 0 26 2 2973.4104 Q16513 Q16513 939 964 PKN2 Serine/threonine-protein kinase N2 yes yes 4 0.0078955 55.063 By MS/MS By MS/MS 1 1 52387000 27706000 24681000 2213 2163 2511 5770;5771 5696;5697 5696 7608 2 GRLDSSEMDHSENEDYTMSSPLPGK PSSPGRIKGRLDSSEM MSSPLPGKKSDKRDDS K G R G K K 0 1 1 3 0 0 3 2 1 0 2 1 2 0 2 5 1 0 1 0 0 0 25 1 2781.1858 Q9NTI5;A9IYQ1 Q9NTI5 1172 1196 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 0.031599 44.158 By MS/MS 1 0 0 0 2214 2918 2512 5772 5698 5698 1156;1157 6162 1 GRLSPVPVPR YDRLFDYRGRLSPVPV LSPVPVPRAVPVKRPR R G R P R A 0 2 0 0 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 1 1076.6455 Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9 132 141 RALY RNA-binding protein Raly no no 2;3 0.0054498 88.163 By matching By MS/MS 2 2 966080000 413400000 552680000 2215 3027;2229 2513 5773;5774;5775;5776 5699;5700 5699 4461 2 GRLTPSPDIIVLSDNEASSPR ARRSEPERGRLTPSPD DNEASSPRSSSRMEER R G R P R S 1 2 1 2 0 0 1 1 0 2 2 0 0 0 3 4 1 0 0 1 0 0 21 1 2223.1495 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 117 137 GATAD2B Transcriptional repressor p66-beta yes no 3 2.472E-05 119.72 By MS/MS By MS/MS 9 8 168990000 82559000 86431000 2216 398 2514;2515;2516;2517 5777;5778;5779;5780;5781;5782;5783;5784;5785;5786;5787;5788;5789;5790;5791;5792;5793 5701;5702;5703;5704;5705;5706;5707;5708;5709;5710;5711;5712;5713;5714;5715;5716;5717;5718;5719 5705 727;728;729;730;6944 17 GRPSKTPSPSQPK QSTPQKGRGRPSKTPS TPSPSQPKKNVRVGRS R G R P K K 0 1 0 0 0 1 0 1 0 0 0 2 0 0 4 3 1 0 0 0 0 0 13 2 1365.7365 Q9NTI5 Q9NTI5 1376 1388 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 2 0.019647 60.937 By matching By MS/MS 1 1 21149000 3235900 17913000 2217 2918 2518 5794;5795 5720 5720 6163 1 GSALGTPAAAEPVTPTSK PHKEEAGKGSALGTPA EPVTPTSKAGSGAPGG K G S S K A 4 0 0 0 0 0 1 2 0 0 1 1 0 0 3 2 3 0 0 1 0 0 18 0 1653.8574 P00519 P00519 839 856 ABL1 Tyrosine-protein kinase ABL1 yes yes 2 0.00052857 104.84 By MS/MS By MS/MS 1 1 22698000 9562100 13136000 2218 1625 2519 5796;5797 5721;5722;5723 5721 7363 3 GSDDELFLGGSNQDSVQGLGR PQELPQAKGSDDELFL DSVQGLGRAVCPAGGE K G S G R A 0 1 1 3 0 2 1 5 0 0 3 0 0 1 0 3 0 0 0 1 0 0 21 0 2149.9876 Q96JB3 Q96JB3 196 216 HIC2 Hypermethylated in cancer 2 protein yes yes 2;3 0.00038766 108.47 By MS/MS By MS/MS 2 1 26237000 15011000 11226000 2219 2670 2520 5798;5799;5800 5724;5725;5726 5726 5502 3 GSDFDCELR CLNYQHYKGSDFDCEL SDFDCELRLLIHQSLA K G S L R L 0 1 0 2 1 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1097.4448 P61978;Q5T6W2 P61978 140 148 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0090586 105.14 By MS/MS By MS/MS 1 1 21951000 7989700 13961000 2220 1931 2521 5801;5802 5727;5728;5729 5729 3 GSDSEDEVLR DHKSESARGSDSEDEV DSEDEVLRMKRKNAIA R G S L R M 0 1 0 2 0 0 2 1 0 0 1 0 0 0 0 2 0 0 0 1 0 0 10 0 1105.4887 Q8WVC0 Q8WVC0 276 285 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 0.024438 61.11 By MS/MS By matching 1 1 12122000 6001700 6120100 2221 2559 2522 5803;5804 5730 5730 5226;5227 0 GSEGYLAATYPTVGQTSPR TQPWSSPKGSEGYLAA TVGQTSPRARKSMSLD K G S P R A 2 1 0 0 0 1 1 3 0 0 1 0 0 0 2 2 3 0 2 1 0 0 19 0 1953.9432 H0Y465;P21359;J3QSG6 H0Y465 2144 2162 NF1 Neurofibromin;Neurofibromin truncated yes no 2 0.00033659 113.37 By MS/MS By MS/MS 1 1 27631000 16433000 11199000 2222 1118 2523 5805;5806 5731;5732 5731 2120;7191 2 GSEKEEYFI QMESDLAKGSEKEEYF SEKEEYFI________ K G S F I - 0 0 0 0 0 0 3 1 0 1 0 1 0 1 0 1 0 0 1 0 0 0 9 1 1100.5026 S4R466;Q0VAQ4 S4R466 75 83 SMAGP Small cell adhesion glycoprotein yes no 2 0.0051087 75.109 By MS/MS By MS/MS 1 1 29337000 13636000 15702000 2223 2022 2524 5807;5808 5733;5734 5734 8324 2 GSESPEMGPEVTPAPR PLPGLDLKGSESPEMG PEVTPAPRDELVEAAC K G S P R D 1 1 0 0 0 0 3 2 0 0 0 0 1 0 4 2 1 0 0 1 0 0 16 0 1639.7512 A0A0A0MSQ2;H0Y4B4;F8W689;P48382 A0A0A0MSQ2 182 197 RFX5 DNA-binding protein RFX5 yes no 2 0.025026 48.568 By MS/MS 1 7519800 0 7519800 2224 256 2525 5809 5735 5735 106 447 1 GSFSEQGINEFLR KMKFALLKGSFSEQGI QGINEFLRELSFGRGS K G S L R E 0 1 1 0 0 1 2 2 0 1 1 0 0 2 0 2 0 0 0 0 0 0 13 0 1482.7103 Q15084 Q15084 374 386 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.025525 83.045 By MS/MS 1 0 0 0 2225 2128 2526 5810 5736 5736 1 GSFSSENYWR LLPTHRRRGSFSSENY FSSENYWRKSYESSED R G S W R K 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 3 0 1 1 0 0 0 10 0 1231.5258 K7ER58;Q6P6C2 K7ER58 19 28 ALKBH5 RNA demethylase ALKBH5 yes no 2 0.017931 66.621 By MS/MS By matching 1 1 12243000 5664800 6578600 2226 1394 2527 5811;5812 5737 5737 2564;2565 1 GSGDTSSLIDPDTSLSELR LSGNSSRRGSGDTSSL DTSLSELRDIYDLKDQ R G S L R D 0 1 0 3 0 0 1 2 0 1 3 0 0 0 1 5 2 0 0 0 0 0 19 0 1948.9225 C9JSU1;Q9Y608 C9JSU1 95 113 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2 0.00033428 113.47 By MS/MS By MS/MS 1 1 9120100 5032200 4087800 2227 693 2528 5813;5814 5738;5739 5738 1279;1280;1281;1282;7039 2 GSGGLFSPSTAHVPDGALGQR DAGRPGERGSGGLFSP PDGALGQRDQSSWQNS R G S Q R D 2 1 0 1 0 1 0 5 1 0 2 0 0 1 2 3 1 0 0 1 0 0 21 0 2009.9919 Q9C0C2 Q9C0C2 1023 1043 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2;3 1.2703E-05 97.713 By MS/MS By MS/MS 2 2 42753000 24206000 18548000 2228 2791 2529 5815;5816;5817;5818 5740;5741;5742;5743 5740 5816 4 GSGLGSPTSSFNSTVFGPSSLNSLR SSFPYTTKGSGLGSPT PSSLNSLRQSPMQTIQ K G S L R Q 0 1 2 0 0 0 0 4 0 0 3 0 0 2 2 8 2 0 0 1 0 0 25 0 2455.1979 O43524 O43524 420 444 FOXO3 Forkhead box protein O3 yes yes 2 1.6393E-09 128.09 By MS/MS 1 16594000 0 16594000 2229 1503 2530 5819 5744 5744 2812 1 GSGSQSSVPSVDQFTGVGIR EGSGESERGSGSQSSV QFTGVGIRVSFTGKQG R G S I R V 0 1 0 1 0 2 0 4 0 1 0 0 0 1 1 5 1 0 0 3 0 0 20 0 1963.9599 Q9UQE7 Q9UQE7 1080 1099 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.00031575 108.71 By MS/MS By MS/MS 1 1 24067000 10008000 14059000 2230 3078 2531 5820;5821 5745;5746 5746 6615 2 GSGTASDDEFENLR RIALPAPRGSGTASDD DDEFENLRIKGPNAVQ R G S L R I 1 1 1 2 0 0 2 2 0 0 1 0 0 1 0 2 1 0 0 0 0 0 14 0 1496.6379 Q7Z6Z7 Q7Z6Z7 1902 1915 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2;3 9.2204E-11 137.73 By MS/MS By MS/MS 2 1 721100000 341250000 379850000 2231 2394 2532 5822;5823;5824 5747;5748;5749 5749 4887 3 GSISEDELITAIK SAAESQGKGSISEDEL DELITAIKEAKGLSYE K G S I K E 1 0 0 1 0 0 2 1 0 3 1 1 0 0 0 2 1 0 0 0 0 0 13 0 1374.7242 Q2NKQ5;Q16799 Q2NKQ5 275 287 RTN1 Reticulon;Reticulon-1 yes no 2 1.5805E-11 149.32 By MS/MS By MS/MS 1 1 25816000 15988000 9828100 2232 2167 2533 5825;5826 5750;5751 5750 4315 2 GSISSTSEVHSPPNVGLR SNTSRLSRGSISSTSE SPPNVGLRRSGQIEGV R G S L R R 0 1 1 0 0 0 1 2 1 1 1 0 0 0 2 5 1 0 0 2 0 0 18 0 1822.9173 Q8WWQ0 Q8WWQ0 673 690 PHIP PH-interacting protein yes yes 3 0.012525 52.432 By MS/MS By matching 1 1 13297000 6961300 6335900 2233 2565 2534 5827;5828 5752 5752 5253 1 GSISTPNSPVK MRVSVSSKGSISTPNS STPNSPVKMTLIPSPN K G S V K M 0 0 1 0 0 0 0 1 0 1 0 1 0 0 2 3 1 0 0 1 0 0 11 0 1085.5717 A0A087WW06;Q96AY4 A0A087WW06 1974 1984 TTC28 Tetratricopeptide repeat protein 28 yes no 2 0.0070161 77.192 By matching By MS/MS 1 2 10792000 5568900 5223400 2234 83 2535 5829;5830;5831 5753;5754 5753 149;150 2 GSKPSPLSVK VESPKEGKGSKPSPLS KPSPLSVKNTKRRLEG K G S V K N 0 0 0 0 0 0 0 1 0 0 1 2 0 0 2 3 0 0 0 1 0 0 10 1 998.57605 Q96S94;A0A0A0MSF3 Q96S94 344 353 CCNL2 Cyclin-L2 yes no 2 0.006388 95.428 By MS/MS By MS/MS 1 1 42394000 25522000 16873000 2235 2710 2536 5832;5833 5755;5756 5755 5594 2 GSLAEAVGSPPPAATPTPTPPTR AFDMSGVRGSLAEAVG PTPTPPTRKTPESFLG R G S T R K 4 1 0 0 0 0 1 2 0 0 1 0 0 0 7 2 4 0 0 1 0 0 23 0 2171.1222 Q9Y6I3 Q9Y6I3 446 468 EPN1 Epsin-1 yes yes 2;3 1.3969E-26 160.36 By MS/MS By MS/MS 2 2 64945000 40656000 24289000 2236 3149 2537 5834;5835;5836;5837 5757;5758;5759;5760;5761;5762;5763;5764;5765 5761 6739 9 GSLAPQDSDSEVSQNR EDVFYTYKGSLAPQDS DSEVSQNRSPHQESLS K G S N R S 1 1 1 2 0 2 1 1 0 0 1 0 0 0 1 4 0 0 0 1 0 0 16 0 1688.7602 J3KN34;P26045 J3KN34 418 433 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 yes no 2 0.0024785 82.774 By MS/MS By MS/MS 1 1 11593000 6331900 5261500 2237 1318 2538 5838;5839 5766;5767 5766 2445 2 GSLASLDSLR APLAQHERGSLASLDS LASLDSLRKGGPPPPN R G S L R K 1 1 0 1 0 0 0 1 0 0 3 0 0 0 0 3 0 0 0 0 0 0 10 0 1017.5455 C9JZR2;O60716;E9PKY0 C9JZR2 345 354 CTNND1 Catenin delta-1 yes no 2 0.0019374 107.09 By MS/MS By matching 1 1 61494000 34561000 26933000 2238 706 2539 5840;5841 5768 5768 1302;1303 1 GSLASLDSLRK APLAQHERGSLASLDS ASLDSLRKGGPPPPNW R G S R K G 1 1 0 1 0 0 0 1 0 0 3 1 0 0 0 3 0 0 0 0 0 0 11 1 1145.6404 C9JZR2;O60716;E9PKY0 C9JZR2 345 355 CTNND1 Catenin delta-1 yes no 2 0.0056193 82.705 By MS/MS By MS/MS 3 3 121000000 59060000 61938000 2239 706 2540;2541 5842;5843;5844;5845;5846;5847 5769;5770;5771;5772 5771 1302;1303 4 GSLDESSLGFGYPK FQKPGTWRGSLDESSL SLGFGYPKFISHQDIR R G S P K F 0 0 0 1 0 0 1 3 0 0 2 1 0 1 1 3 0 0 1 0 0 0 14 0 1455.6882 Q2KJU6;Q9BUZ4 Q2KJU6 99 112 TRAF4 TNF receptor-associated factor 4 yes no 2 0.00017133 119.96 By MS/MS By MS/MS 1 1 9404300 5215700 4188500 2240 2177 2542 5848;5849 5773;5774;5775 5774 4329 3 GSLLPTSPR LLSELLKKGSLLPTSP SLLPTSPRLVNESEMA K G S P R L 0 1 0 0 0 0 0 1 0 0 2 0 0 0 2 2 1 0 0 0 0 0 9 0 926.51853 H7C128;H7C179;H7C127 H7C128 269 277 BRD8 yes no 2 0.0063997 84.188 By MS/MS By MS/MS 1 1 37379000 18345000 19034000 2241 1273 2543 5850;5851 5776;5777;5778 5776 2360 3 GSLSLDDFR TRNSKLNRGSLSLDDF SLSLDDFRNTQKRGES R G S F R N 0 1 0 2 0 0 0 1 0 0 2 0 0 1 0 2 0 0 0 0 0 0 9 0 1008.4876 Q9Y5W7 Q9Y5W7 484 492 SNX14 Sorting nexin-14 yes yes 2 0.014419 72.289 By MS/MS 1 2714300 2714300 0 2242 3137 2544 5852 5779 5779 6718 1 GSLSQELSK TPMSPLLKGSLSQELS SLSQELSKSFLTLTQP K G S S K S 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 3 0 0 0 0 0 0 9 0 947.49238 Q9H6A9 Q9H6A9 243 251 PCNXL3 Pecanex-like protein 3 yes yes 2 0.026005 61.419 By MS/MS By matching 1 1 9157500 4312800 4844700 2243 2840 2545 5853;5854 5780 5780 5969 1 GSLVGLVDYPDDEEEDEEEESSPR PTSVTATKGSLVGLVD EEEESSPRKRPRLGS_ K G S P R K 0 1 0 4 0 0 7 2 0 0 2 0 0 0 2 3 0 0 1 2 0 0 24 0 2694.1304 Q5MIZ7 Q5MIZ7 819 842 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B yes yes 2 0.0090786 73.722 By matching By MS/MS 1 1 15315000 7216900 8097700 2244 2228 2546 5855;5856 5781 5781 4460 0 GSNYHLSDNDASDVE YIEYIRVKGSNYHLSD DNDASDVE________ K G S V E - 1 0 2 3 0 0 1 1 1 0 1 0 0 0 0 3 0 0 1 1 0 0 15 0 1621.6492 Q96QE2 Q96QE2 634 648 SLC2A13 Proton myo-inositol cotransporter yes yes 2 0.012547 69.379 By MS/MS By matching 1 1 14237000 6296500 7940200 2245 2702 2547 5857;5858 5782 5782 5574 1 GSPDGSLQTGKPSAPK ALKLRSPRGSPDGSLQ TGKPSAPKKLKLDVGE R G S P K K 1 0 0 1 0 1 0 3 0 0 1 2 0 0 3 3 1 0 0 0 0 0 16 1 1525.7736 C9JFV4;Q8IZL8;E7EV54 C9JFV4 530 545 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 2 5.8043E-07 132.87 By MS/MS By MS/MS 1 1 302440000 161250000 141190000 2246 662 2548 5859;5860 5783;5784 5783 1230 2 GSPEEELPLPAFEK CHSLGTARGSPEEELP LPLPAFEKLNPYPTPS R G S E K L 1 0 0 0 0 0 4 1 0 0 2 1 0 1 3 1 0 0 0 0 0 0 14 0 1541.7613 Q5JTD0 Q5JTD0 299 312 TJAP1 Tight junction-associated protein 1 yes yes 2 6.3278E-05 123.68 By MS/MS By MS/MS 1 1 62773000 34983000 27790000 2247 2222 2549 5861;5862 5785;5786 5785 4450 2 GSPGEEWAPEVGEDAPQR DAFEDAPRGSPGEEWA VGEDAPQRLGEEPEEE R G S Q R L 2 1 0 1 0 1 4 3 0 0 0 0 0 0 3 1 0 1 0 1 0 0 18 0 1909.8442 Q9NZ56 Q9NZ56 360 377 FMN2 Formin-2 yes yes 2 0.00375 75.239 By MS/MS By MS/MS 1 1 20871000 11011000 9860000 2248 2954 2550 5863;5864 5787;5788;5789 5789 6228 3 GSPGGYLGAK EEETEHAKGSPGGYLG PGGYLGAKKKKKKQKR K G S A K K 1 0 0 0 0 0 0 4 0 0 1 1 0 0 1 1 0 0 1 0 0 0 10 0 905.46068 O60551 O60551 37 46 NMT2 Glycylpeptide N-tetradecanoyltransferase 2 yes yes 2 0.014359 69.672 By matching By MS/MS 1 1 30021000 16852000 13169000 2249 1521 2551 5865;5866 5790 5790 2872 1 GSPHYFSPFRPY RDSPYQSRGSPHYFSP YFSPFRPY________ R G S P Y - 0 1 0 0 0 0 0 1 1 0 0 0 0 2 3 2 0 0 2 0 0 0 12 1 1453.6779 Q13242 Q13242 210 221 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 2;3 0.00082673 123.1 By MS/MS By MS/MS 5 5 2613600000 1346400000 1267300000 2250 2051 2552;2553 5867;5868;5869;5870;5871;5872;5873;5874;5875;5876 5791;5792;5793;5794;5795;5796;5797;5798;5799;5800;5801;5802 5798 4026;4027;8328 12 GSPNLTLPK KCSTYQIKGSPNLTLP SPNLTLPKESYIQEDD K G S P K E 0 0 1 0 0 0 0 1 0 0 2 1 0 0 2 1 1 0 0 0 0 0 9 0 925.52328 Q12923 Q12923 2031 2039 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.014566 72.096 By matching By MS/MS 1 1 6246200 3290800 2955400 2251 2034 2554 5877;5878 5803 5803 3983 1 GSPNTASAEATLPR YSSLREARGSPNTASA SAEATLPRWRAGEQAQ R G S P R W 3 1 1 0 0 0 1 1 0 0 1 0 0 0 2 2 2 0 0 0 0 0 14 0 1370.679 Q6PJG6 Q6PJG6 741 754 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.001311 91.969 By MS/MS By MS/MS 1 1 47246000 18491000 28755000 2252 2328 2555 5879;5880 5804;5805 5805 4691 2 GSPPMSEITSVR LMVKATDKGSPPMSEI MSEITSVRIFVTIADN K G S V R I 0 1 0 0 0 0 1 1 0 1 0 0 1 0 2 3 1 0 0 1 0 0 12 0 1259.618 A0A087WVP1;Q14517 A0A087WVP1 1645 1656 FAT1 Protocadherin Fat 1;Protocadherin Fat 1, nuclear form yes no 1 0.026859 48.659 By MS/MS 1 1726500 1726500 0 2253 78 2556 5881 5806 5806 28 139 0 GSPPRPPPPPPLLGTVSSPSSSPTHLWTGEVSAAPPPAR RSAAPGARGSPPRPPP SAAPPPARVRHRRRSP R G S A R V 3 2 0 0 0 0 1 3 1 0 3 0 0 0 13 7 3 1 0 2 0 0 39 1 3878.0115 Q6P1L5 Q6P1L5 135 173 FAM117B Protein FAM117B yes yes 4 0.00055709 51.451 By MS/MS 1 9420200 0 9420200 2254 2315 2557 5882 5807 5807 4666;4667 1 GSPPVPSGPPMEEDGLR LMAEDGVRGSPPVPSG PMEEDGLRWTPKSPLD R G S L R W 0 1 0 1 0 0 2 3 0 0 1 0 1 0 5 2 0 0 0 1 0 0 17 0 1720.809 A0A087X0R7;Q9H4L4 A0A087X0R7 141 157 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 0.023483 48.919 By MS/MS 1 2180800 2180800 0 2255 161 2558 5883 5808 5808 61 261 0 GSPQSAAAELSSGLLASAAASSR DNIMTSLRGSPQSAAA ASAAASSRAGIAPPLA R G S S R A 7 1 0 0 0 1 1 2 0 0 3 0 0 0 1 7 0 0 0 0 0 0 23 0 2088.0447 Q12948 Q12948 319 341 FOXC1 Forkhead box protein C1 yes yes 2;3 2.2231E-05 115.54 By MS/MS By MS/MS 2 2 68808000 43322000 25486000 2256 2035 2559 5884;5885;5886;5887 5809;5810;5811 5811 3992 3 GSPSSHLLGADHGLR GGAALGGRGSPSSHLL LGADHGLRKAKKPKKK R G S L R K 1 1 0 1 0 0 0 3 2 0 3 0 0 0 1 3 0 0 0 0 0 0 15 0 1502.759 F8VU11;Q6NWY9 F8VU11 784 798 PRPF40B Pre-mRNA-processing factor 40 homolog B yes no 3 0.0024967 71.929 By MS/MS By MS/MS 1 1 7564900 3663800 3901100 2257 1010 2560 5888;5889 5812;5813 5813 1897 2 GSPTGGAQLLK GSHPQGPRGSPTGGAQ TGGAQLLKRKRKLGVV R G S L K R 1 0 0 0 0 1 0 3 0 0 2 1 0 0 1 1 1 0 0 0 0 0 11 0 1027.5662 Q14684 Q14684 512 522 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.00030169 114.71 By MS/MS By MS/MS 1 1 128760000 64479000 64280000 2258 2102 2561 5890;5891 5814;5815 5815 4156 2 GSPTGGAQLLKR GSHPQGPRGSPTGGAQ GGAQLLKRKRKLGVVP R G S K R K 1 1 0 0 0 1 0 3 0 0 2 1 0 0 1 1 1 0 0 0 0 0 12 1 1183.6673 Q14684 Q14684 512 523 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 3 0.0062683 73.415 By MS/MS By MS/MS 1 1 0 0 0 2259 2102 2562 5892;5893 5816;5817 5817 4156 2 GSPVFLPR KMDGKESKGSPVFLPR GSPVFLPRKENSSVEA K G S P R K 0 1 0 0 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 1 0 0 8 0 871.49159 J3QSD7;Q9NYV4 J3QSD7 421 428 CDK12 Cyclin-dependent kinase 12 yes no 2 0.014864 78.113 By matching By MS/MS 1 1 29153000 15744000 13409000 2260 1361 2563 5894;5895 5818 5818 2516 1 GSQPPPAAESQSSLRR SSDPEEEKGSQPPPAA ESQSSLRRQKREKETS K G S R R Q 2 2 0 0 0 2 1 1 0 0 1 0 0 0 3 4 0 0 0 0 0 0 16 1 1666.8387 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 46 61 EPB41L2 Band 4.1-like protein 2 yes no 3 0.030075 52.265 By matching By MS/MS 1 1 45936000 23665000 22271000 2261 1502 2564 5896;5897 5819 5819 0 GSRPEMTPVSLRSTK PVPGSERRGSRPEMTP PVSLRSTKEGPETPPR R G S T K E 0 2 0 0 0 0 1 1 0 0 1 1 1 0 2 3 2 0 0 1 0 0 15 2 1644.8617 A0A5E8;Q99501 A0A5E8 315 329 GAS2L1 GAS2-like protein 1 yes no 2 0.026078 73.9 By matching By MS/MS 1 1 88130000 47277000 40853000 2262 437 2565 5898;5899 5820 5820 171 817;818 1 GSRPPLILQSQSLPCSSPR AGSEGTPKGSRPPLIL SLPCSSPRDVPPDILL K G S P R D 0 2 0 0 1 2 0 1 0 1 3 0 0 0 4 5 0 0 0 0 0 0 19 1 2079.0895 Q6KC79 Q6KC79 290 308 NIPBL Nipped-B-like protein yes yes 3 0.0003799 88.239 By MS/MS By MS/MS 1 1 87670000 49399000 38272000 2263 2307 2566 5900;5901 5821;5822 5822 4652;4653 2 GSRSNLSTRDASILTEMPTQPGK GSQLSSTKGSRSNLST EMPTQPGKPLIPPMNR K G S G K P 1 2 1 1 0 1 1 2 0 1 2 1 1 0 2 4 3 0 0 0 0 0 23 2 2445.2282 Q8TDF5 Q8TDF5 442 464 NETO1 Neuropilin and tolloid-like protein 1 yes yes 3 0.026096 48.422 By MS/MS 1 8707500 8707500 0 2264 2539 2567 5902 5823 5823 1017 5184 0 GSSESPFDLTTK GEVKKLQKGSSESPFD SPFDLTTKRKDEKPLT K G S T K R 0 0 0 1 0 0 1 1 0 0 1 1 0 1 1 3 2 0 0 0 0 0 12 0 1267.5932 E7EUL6;A0A0C3SFZ7;E7EQ57;Q03112;H9KVD4 E7EUL6 548 559 MECOM MDS1 and EVI1 complex locus protein EVI1 yes no 2 0.014422 69.456 By MS/MS By matching 1 1 6853800 3541000 3312700 2265 293 2568 5903;5904 5824 5824 518 1 GSSFEMTDDDSAIR HAPLRDSRGSSFEMTD TDDDSAIRALTQFPLP R G S I R A 1 1 0 3 0 0 1 1 0 1 0 0 1 1 0 3 1 0 0 0 0 0 14 0 1529.6304 H7BXY3;Q7L2E3 H7BXY3 196 209 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 2 0.00016191 120.29 By MS/MS By MS/MS 2 2 38185000 16522000 21663000 2266 1260 2569;2570 5905;5906;5907;5908 5825;5826;5827;5828 5827 454 2340;2341 4 GSSGENNNPGSPTVSNFR AHRSGLQRGSSGENNN SPTVSNFRQLQEKLVF R G S F R Q 0 1 4 0 0 0 1 3 0 0 0 0 0 1 2 4 1 0 0 1 0 0 18 0 1819.8085 D6RD37;D6RAX8;D6RBL1;D6RDZ9;D6RCK9;D6R8Z7;D6RDZ7 D6RD37 32 49 TSC22D3 yes no 2 0.0002263 119.48 By MS/MS By matching 2 1 32821000 26907000 5913300 2267 746 2571;2572 5909;5910;5911 5829;5830 5829 1346;1347;1348 2 GSSGGYGSGGAALQPK APILEKPKGSSGGYGS GGAALQPKGGLFQGGV K G S P K G 2 0 0 0 0 1 0 6 0 0 1 1 0 0 1 3 0 0 1 0 0 0 16 0 1392.6634 Q8TF74;J3QKM5 Q8TF74 69 84 WIPF2 WAS/WASL-interacting protein family member 2 yes no 2 0.023383 50.467 By MS/MS By matching 1 1 11353000 5981500 5371600 2268 2549 2573 5912;5913 5831 5831 0 GSSGPQPAKPCSGATPTPLLLVGDR PGLAPRTRGSSGPQPA PLLLVGDRSPVPSPGS R G S D R S 2 1 0 1 1 1 0 4 0 0 3 1 0 0 5 3 2 0 0 1 0 0 25 1 2462.2588 Q8N3F8;H0Y6J8 Q8N3F8 587 611 MICALL1 MICAL-like protein 1 yes no 3 2.8917E-06 87.748 By MS/MS By MS/MS 1 1 22546000 11587000 10959000 2269 2466 2574 5914;5915 5832;5833 5833 5037;5038 2 GSSLQVTFPSETLNLSEKCI GRAGPAPKGSSLQVTF LNLSEKCI________ K G S C I - 0 0 1 0 1 1 2 1 0 1 3 1 0 1 1 4 2 0 0 1 0 0 20 1 2209.0936 P35408 P35408 469 488 PTGER4 Prostaglandin E2 receptor EP4 subtype yes yes 2 0.0019039 78.324 By MS/MS 1 0 0 0 2270 1794 2575 5916 5834 5834 81 3388;3389;7431 1 GSSLSGTDDGAQEVVK NGDAPRERGSSLSGTD DGAQEVVKDILEDVVT R G S V K D 1 0 0 2 0 1 1 3 0 0 1 1 0 0 0 3 1 0 0 2 0 0 16 0 1548.7267 Q9Y6D5 Q9Y6D5 275 290 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.02593 60.093 By MS/MS By matching 1 1 45295000 22326000 22968000 2271 3147 2576 5917;5918 5835 5835 6736 1 GSSPGIQDTLEAEDGAFETDEAPEDR EPDPKKIKGSSPGIQD TDEAPEDRILSCRKAG K G S D R I 3 1 0 4 0 1 5 3 0 1 1 0 0 1 2 2 2 0 0 0 0 0 26 0 2735.1682 Q9UNX4 Q9UNX4 239 264 WDR3 WD repeat-containing protein 3 yes yes 2;3 0.00061377 73.809 By MS/MS By MS/MS 2 2 170980000 75763000 95221000 2272 3062 2577 5919;5920;5921;5922 5836;5837;5838;5839 5838 6462;6463;7914 4 GSSPGPRPVEGTPASR KTKSQTHRGSSPGPRP VEGTPASRTQDPSSPG R G S S R T 1 2 0 0 0 0 1 3 0 0 0 0 0 0 4 3 1 0 0 1 0 0 16 1 1550.7801 Q13112 Q13112 408 423 CHAF1B Chromatin assembly factor 1 subunit B yes yes 3 0.028139 50.653 By MS/MS By MS/MS 1 1 211890000 109770000 102120000 2273 2041 2578 5923;5924 5840;5841 5840 4005 1 GSSPLGPAGLGAEEPAAGPQLPSWLQPER EWDTQVVKGSSPLGPA PSWLQPERCAVFQCAQ K G S E R C 4 1 0 0 0 2 3 5 0 0 4 0 0 0 6 3 0 1 0 0 0 0 29 0 2868.4406 H0YKL4;O43482 H0YKL4 22 50 OIP5 Protein yippee-like;Protein Mis18-beta yes no 3 0.003768 51.22 By MS/MS By matching 1 1 18867000 9380300 9487100 2274 1203 2579 5925;5926 5842 5842 2246 1 GSSPSHSATSVHTSV AVSSSSERGSSPSHSA ATSVHTSV________ R G S S V - 1 0 0 0 0 0 0 1 2 0 0 0 0 0 1 6 2 0 0 2 0 0 15 0 1439.6641 F8WA39;Q13613 F8WA39 659 673 MTMR1 Myotubularin-related protein 1 yes no 2 0.01652 66.708 By MS/MS 1 37058000 37058000 0 2275 1044 2580 5927 5843 5843 1979;1980 1 GSSPSIRPIQGSQGSSSPVEK LALTEGGKGSSPSIRP GSSSPVEKEVVEATDS K G S E K E 0 1 0 0 0 2 1 3 0 2 0 1 0 0 3 7 0 0 0 1 0 0 21 1 2084.0498 F8W6N3;Q92560;H0Y8E8 F8W6N3 563 583 BAP1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase BAP1 yes no 3 0.0012808 68.168 By MS/MS By matching 1 1 13526000 7368900 6157200 2276 1034 2581 5928;5929 5844 5844 1934;1935;1936;1937;1938 1 GSSPTPPCSPVQPSK TAEAIGLKGSSPTPPC CSPVQPSKQLEYLARI K G S S K Q 0 0 0 0 1 1 0 1 0 0 0 1 0 0 5 4 1 0 0 1 0 0 15 0 1524.7242 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3 H0YBY0 97 111 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 2 0.0096821 80.361 By MS/MS By MS/MS 2 2 62050000 31523000 30527000 2277 270 2582;2583 5930;5931;5932;5933 5845;5846 5845 477;6916 2 GSSSIELTDLDIPDIPGLHCEPLSHSPR SNLEIIKKGSSSIELT EPLSHSPRHLTQQDPL K G S P R H 0 1 0 3 1 0 2 2 2 3 4 0 0 0 4 5 1 0 0 0 0 0 28 0 3041.4764 H0Y3S5;E7ETR9;H0Y2W4;Q9H579 H0Y3S5 150 177 MROH8 Protein MROH8 yes no 3 0.011174 46.065 By matching By MS/MS 1 1 15153000 5600700 9552500 2278 821 2584 5934;5935 5847 5847 1490;1491;7085 1 GSTDNLMDDIER AISTIVLRGSTDNLMD NLMDDIERAVDDGVNT R G S E R A 0 1 1 3 0 0 1 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 12 0 1364.5878 P50990 P50990 379 390 CCT8 T-complex protein 1 subunit theta yes yes 2 0.02485 56.569 By MS/MS 1 0 0 0 2279 1871 2585 5936 5848 5848 728 1 GSTLDLSDLEAEK KHPAVKEKGSTLDLSD LSDLEAEKLVMFQRRY K G S E K L 1 0 0 2 0 0 2 1 0 0 3 1 0 0 0 2 1 0 0 0 0 0 13 0 1376.6671 O00767 O00767 197 209 SCD Acyl-CoA desaturase yes yes 2 0.0019501 88.075 By matching By MS/MS 1 1 13259000 7066400 6192400 2280 1446 2586 5937;5938 5849 5849 2660 1 GSVCTSATMAR PLVSANAKGSVCTSAT CTSATMARPGIDRQAS K G S A R P 2 1 0 0 1 0 0 1 0 0 0 0 1 0 0 2 2 0 0 1 0 0 11 0 1139.5063 Q8WZ74;F8WB16 Q8WZ74 343 353 CTTNBP2 Cortactin-binding protein 2 yes no 1 0.02216 46.796 By MS/MS 1 2802700 0 2802700 2281 2577 2587 5939 5850 5850 1033 5288 1 GSVGAVPSGTSPGGVATTAAAGSR GAGGGREKGSVGAVPS TTAAAGSRHSPAGSQA K G S S R H 5 1 0 0 0 0 0 6 0 0 0 0 0 0 2 4 3 0 0 3 0 0 24 0 2014.0079 Q6ZNB6 Q6ZNB6 40 63 NFXL1 NF-X1-type zinc finger protein NFXL1 yes yes 2 3.6084E-05 86.548 By MS/MS By MS/MS 1 1 9729300 4018000 5711300 2282 2350 2588 5940;5941 5851;5852 5851 4769 2 GSVPLSSSPPATHFPDETEITNPVPK DLEADDVKGSVPLSSS EITNPVPKKNVTVKKT K G S P K K 1 0 1 1 0 0 2 1 1 1 1 1 0 1 6 4 3 0 0 2 0 0 26 0 2703.3392 P11388 P11388 1386 1411 TOP2A DNA topoisomerase 2-alpha yes yes 3;4 5.5737E-07 89.297 By MS/MS By MS/MS 1 2 603410000 244070000 359350000 2283 1682 2589 5942;5943;5944 5853;5854;5855;5856;5857;5858 5855 3171;3172;3173 5 GSVSDCSDGTSELEEPLGEDPR VVARRLGRGSVSDCSD EPLGEDPRARPPGPPD R G S P R A 0 1 0 3 1 0 4 3 0 0 2 0 0 0 2 4 1 0 0 1 0 0 22 0 2334.9758 P50548 P50548 184 205 ERF ETS domain-containing transcription factor ERF yes yes 2 0.00014933 92.932 By MS/MS By MS/MS 1 1 26720000 13469000 13251000 2284 1868 2590 5945;5946 5859;5860;5861;5862 5862 3628 4 GSVSDEEMMELR ________________ DEEMMELREAFAKVDT R G S L R E 0 1 0 1 0 0 3 1 0 0 1 0 2 0 0 2 0 0 0 1 0 0 12 0 1381.5854 P13796;Q5TBN3;Q5TBN5 P13796 4 15 LCP1 Plastin-2 yes no 2 0.00082339 86.262 By MS/MS By MS/MS 2 2 36773000 18788000 17985000 2285 1695 2591;2592 5947;5948;5949;5950 5863;5864;5865;5866 5865 634;635 3195;3196 3 GSVSQPSTPSPPKPTGIFQTSANSSFEPVK TTVSQNYRGSVSQPST NSSFEPVKSHLVGVKP R G S V K S 1 0 1 0 0 2 1 2 0 1 0 2 0 2 6 7 3 0 0 2 0 0 30 1 3058.5247 F1T0I1;J3KNL6;O15027 F1T0I1 586 615 SEC16A Protein transport protein Sec16A yes no 3 0.0002055 65.775 By matching By MS/MS 2 2 53125000 27767000 25358000 2286 930 2593;2594 5951;5952;5953;5954 5867;5868 5867 1735;1736;1737;1738;7123 2 GSYGDLGGPIITTQVTIPK DYSYAGGRGSYGDLGG TTQVTIPKDLAGSIIG R G S P K D 0 0 0 1 0 1 0 4 0 3 1 1 0 0 2 1 3 0 1 1 0 0 19 0 1916.0255 P61978;Q5T6W2;S4R359 P61978 378 396 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2;3 1.2158E-71 199.36 By MS/MS By MS/MS 2 2 145930000 81853000 64076000 2287 1931 2595 5955;5956;5957;5958 5869;5870;5871;5872;5873;5874 5872 3724 6 GSYGSDAEEEEYR SRPYQDTRGSYGSDAE DAEEEEYRQQLSEHSK R G S Y R Q 1 1 0 1 0 0 4 2 0 0 0 0 0 0 0 2 0 0 2 0 0 0 13 0 1490.5797 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1214 1226 TJP2 Tight junction protein ZO-2 yes no 2 0.0084449 75.764 By matching By MS/MS 1 1 35218000 17833000 17385000 2288 415 2596 5959;5960 5875 5875 774 1 GTDDLNPVTSTPAKPSSPPPEFSFNTPGK VIPMPLLKGTDDLNPV FSFNTPGKNVNPVILL K G T G K N 1 0 2 2 0 0 1 2 0 0 1 2 0 2 7 4 4 0 0 1 0 0 29 1 2984.4403 B5MCR8;Q6NXT4 B5MCR8 292 320 SLC30A6 Zinc transporter 6 yes no 3 0.00046107 62.582 By MS/MS By MS/MS 1 1 61932000 31239000 30693000 2289 577 2597 5961;5962 5876;5877 5877 1059;1060 2 GTDTQTPAVLSPSK LRQNAPPKGTDTQTPA PAVLSPSKTQATLKPK K G T S K T 1 0 0 1 0 1 0 1 0 0 1 1 0 0 2 2 3 0 0 1 0 0 14 0 1400.7147 P46087 P46087 722 735 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 1.7407E-111 228.9 By MS/MS By MS/MS 1 1 116680000 60831000 55852000 2290 1836 2598 5963;5964 5878;5879;5880 5879 3472 3 GTDTQTPAVLSPSKTQATLKPK LRQNAPPKGTDTQTPA TQATLKPKDHHQPLGR K G T P K D 2 0 0 1 0 2 0 1 0 0 2 3 0 0 3 2 5 0 0 1 0 0 22 2 2268.2325 P46087 P46087 722 743 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 3 8.6228E-06 124.98 By MS/MS By MS/MS 1 1 137630000 93364000 44265000 2291 1836 2599 5965;5966 5881;5882;5883;5884;5885;5886 5884 3472 6 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTK GTPALNAKGTEAPAVV APRPDHTKSIYTRSVI K G T T K S 4 1 0 4 0 0 6 1 1 1 0 1 0 0 5 0 4 0 0 3 0 0 31 1 3314.5426 Q13177 Q13177 161 191 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 3;4 2.5691E-07 83.788 By MS/MS By MS/MS 2 1 41808000 28008000 13800000 2292 2047 2600 5967;5968;5969 5887;5888;5889;5890 5890 7551;7552 4 GTEASPPQNNSGSSSPVFTFR DGHAASPRGTEASPPQ SSPVFTFRHPLLSSGG R G T F R H 1 1 2 0 0 1 1 2 0 0 0 0 0 2 3 5 2 0 0 1 0 0 21 0 2165.9978 Q9P1Y5 Q9P1Y5 337 357 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 3 0.00059785 72.676 By MS/MS By matching 1 1 7486000 5057100 2428900 2293 2968 2601 5970;5971 5891;5892 5891 6251 2 GTEASSGTEAATGLEGEEK LYQDEAPKGTEASSGT TGLEGEEKDGISDSDS K G T E K D 3 0 0 0 0 0 5 4 0 0 1 1 0 0 0 2 3 0 0 0 0 0 19 0 1822.8068 Q8IY81 Q8IY81 594 612 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.00014022 120.99 By MS/MS By MS/MS 1 1 18939000 9199600 9739200 2294 2438 2602 5972;5973 5893;5894 5894 4986;4987 2 GTELSGASSFDDTNEK SPDTRVPRGTELSGAS SFDDTNEKFYDSHPVA R G T E K F 1 0 1 2 0 0 2 2 0 0 1 1 0 1 0 3 2 0 0 0 0 0 16 0 1656.7115 O75132 O75132 632 647 ZBED4 Zinc finger BED domain-containing protein 4 yes yes 2 0.02017 60.307 By MS/MS 1 0 0 0 2295 1535 2603 5974 5895 5895 2896 1 GTENGVNGTLTSNVADSPR TKGRSSKKGTENGVNG SNVADSPRNKKEKSS_ K G T P R N 1 1 3 1 0 0 1 3 0 0 1 0 0 0 1 2 3 0 0 2 0 0 19 0 1887.8922 G3XAN4;Q15629 G3XAN4 263 281 TRAM1 Translocating chain-associated membrane protein 1 yes no 2 0.0039786 70.615 By MS/MS By MS/MS 2 1 14032000 9468400 4563100 2296 1094 2604;2605 5975;5976;5977 5896;5897 5897 49;50 2055 2 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR HSEGSLQKGTEPSPGG PEEAQPPRLGQERDPG K G T P R L 2 2 0 0 0 2 4 5 0 0 0 0 0 0 11 3 2 0 0 2 0 0 33 1 3258.5905 I3L1Q2;Q8WUZ0 I3L1Q2 110 142 BCL7C B-cell CLL/lymphoma 7 protein family member C yes no 3 1.0927E-06 75.103 By MS/MS By matching 2 2 114830000 52038000 62795000 2297 1306 2606;2607 5978;5979;5980;5981 5898;5899 5898 2425;2426;2427 2 GTGGVDTAATGGVFDISNLDR ENLRLQKRGTGGVDTA FDISNLDRLGKSEVEL R G T D R L 2 1 1 3 0 0 0 5 0 1 1 0 0 1 0 1 3 0 0 2 0 0 21 0 2021.9654 P12532 P12532 354 374 CKMT1A Creatine kinase U-type, mitochondrial yes yes 2 0.00048964 109.07 By MS/MS By MS/MS 1 1 15628000 9230300 6397900 2298 1688 2608 5982;5983 5900;5901;5902 5902 3 GTGGVDTAAVGGVFDVSNADR KRLRLQKRGTGGVDTA FDVSNADRLGFSEVEL R G T D R L 3 1 1 3 0 0 0 5 0 0 0 0 0 1 0 1 2 0 0 4 0 0 21 0 1963.9235 P12277;H0YJG0 P12277 321 341 CKB Creatine kinase B-type yes no 2 0.00025498 117 By MS/MS By MS/MS 1 1 12546000 4963100 7582800 2299 1687 2609 5984;5985 5903;5904 5904 2 GTGQSDDSDIWDDTALIK EDSVLFRRGTGQSDDS WDDTALIKAYDKAVAS R G T I K A 1 0 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 18 0 1935.8698 B4DP61;E7EQZ4;Q16637 B4DP61 24 41 SMN2;SMN1 Survival motor neuron protein yes no 2 2.8442E-43 174.91 By MS/MS By MS/MS 2 2 244840000 139950000 104890000 2300 554 2610;2611 5986;5987;5988;5989 5905;5906;5907 5906 1028;1029;6992 3 GTGSADSIATLPK VTTLQDGKGTGSADSI DSIATLPKGFGSVEEL K G T P K G 2 0 0 1 0 0 0 2 0 1 1 1 0 0 1 2 2 0 0 0 0 0 13 0 1216.6299 B5MDQ0;Q2NKX8 B5MDQ0 681 693 ERCC6L DNA excision repair protein ERCC-6-like yes no 2 0.0013294 104.7 By matching By MS/MS 1 1 11730000 5130900 6599100 2301 582 2612 5990;5991 5908 5908 1063 1 GTGSSSSGVLMVGPNFR GRSGHNTRGTGSSSSG LMVGPNFRVGKKIGCG R G T F R V 0 1 1 0 0 0 0 4 0 0 1 0 1 1 1 4 1 0 0 2 0 0 17 0 1651.7988 Q9Y6M4 Q9Y6M4 28 44 CSNK1G3 Casein kinase I isoform gamma-3 yes yes 2 0.00099745 89.911 By matching By MS/MS 1 1 17052000 7264300 9787600 2302 3150 2613 5992;5993 5909;5910 5910 1250 6740;7958 2 GTLSDSEIETNSATSTIFGK SVHLASSRGTLSDSEI ATSTIFGKAHSLKPSI R G T G K A 1 0 1 1 0 0 2 2 0 2 1 1 0 1 0 4 4 0 0 0 0 0 20 0 2056.9801 F8W8U2;A0A0A0MRB5;Q8WXG6 F8W8U2 46 65 MADD MAP kinase-activating death domain protein yes no 2 2.2429E-10 141.22 By MS/MS By MS/MS 1 1 17199000 8310200 8888900 2303 206 2614 5994;5995 5911;5912 5912 367;6887 2 GTPLYGQPSWWGDDEVDEKR MDISAMPRGTPLYGQP DDEVDEKRAFKTNGKP R G T K R A 0 1 0 3 0 1 2 3 0 0 1 1 0 0 2 1 1 2 1 1 0 0 20 1 2334.0553 H0Y2V6;Q5SW79 H0Y2V6 75 94 CEP170 Centrosomal protein of 170 kDa yes no 3 0.00086127 88.504 By MS/MS By matching 1 1 16053000 10082000 5971900 2304 1112 2615 5996;5997 5913 5913 7189 1 GTSPRPPEGGLGYSQLGDDDLK SEQQRVKRGTSPRPPE QLGDDDLKETGFHLTT R G T L K E 0 1 0 3 0 1 1 5 0 0 3 1 0 0 3 2 1 0 1 0 0 0 22 1 2258.0815 J3QR29;A0A0D9SEI3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;P21127;Q5QPR4;Q5QPR3;Q9UQ88 Q5QPR4 703 724 CDK11B;CDC2L1;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 3 0.0029125 64.318 By MS/MS By matching 1 1 44143000 21814000 22328000 2305 333;2230 2616 5998;5999 5914 5914 588;6926 1 GTVNLTWSRASGKPVNHSTR VVDLAPSKGTVNLTWS KPVNHSTRKEEKQRNG K G T T R K 1 2 2 0 0 0 0 2 1 0 1 1 0 0 1 3 3 1 0 2 0 0 20 2 2167.1246 P01854 P01854 249 268 IGHE Ig epsilon chain C region yes yes 2 0.02099 48.467 By MS/MS 1 4304400 0 4304400 2306 1628 2617 6000 5915 5915 3072;3073 1 GTYGILSK SYSSASTRGTYGILSK GTYGILSKTVGTQDTP R G T S K T 0 0 0 0 0 0 0 2 0 1 1 1 0 0 0 1 1 0 1 0 0 0 8 0 837.45962 Q08378 Q08378 327 334 GOLGA3 Golgin subfamily A member 3 yes yes 2 0.0045954 115.49 By MS/MS By MS/MS 1 1 31704000 14916000 16788000 2307 2013 2618 6001;6002 5916;5917 5917 8323 2 GTYVPSSPTR TYGAAAGKGTYVPSSP YVPSSPTRLAYTDDLG K G T T R L 0 1 0 0 0 0 0 1 0 0 0 0 0 0 2 2 2 0 1 1 0 0 10 0 1063.5298 Q9Y4P8 Q9Y4P8 407 416 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 yes yes 2 0.010612 74.376 By MS/MS By MS/MS 1 1 170960000 101460000 69502000 2308 3121 2619 6003;6004 5918;5919 5919 6688 2 GVAGPGPIGREPDPDSDWEPEER TRCGFATRGVAGPGPI SDWEPEERELQEVEST R G V E R E 1 2 0 3 0 0 4 4 0 1 0 0 0 0 5 1 0 1 0 1 0 0 23 1 2461.1146 Q9NPE2 Q9NPE2 26 48 NGRN Neugrin yes yes 3 0.0095687 57.738 By MS/MS By MS/MS 1 1 29963000 16745000 13218000 2309 2886 2620 6005;6006 5920;5921 5921 6077 1 GVAPADSPEAPRR EFLASVARGVAPADSP DSPEAPRRSFAGGTWD R G V R R S 3 2 0 1 0 0 1 1 0 0 0 0 0 0 3 1 0 0 0 1 0 0 13 1 1321.6739 Q9P2G1 Q9P2G1 731 743 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 yes yes 2 0.020838 67.704 By MS/MS By matching 1 1 17572000 10229000 7343000 2310 2981 2621 6007;6008 5922 5922 6277 1 GVEEEEEDGEMRE CNNVLYIRGVEEEEED EEDGEMRE________ R G V R E - 0 1 0 1 0 0 7 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 13 1 1536.5886 P62306 P62306 74 86 SNRPF Small nuclear ribonucleoprotein F yes yes 2 6.0498E-15 157.97 By MS/MS By MS/MS 1 1 59988000 37147000 22841000 2311 1940 2622 6009;6010 5923;5924 5924 760 2 GVELCFPENETPPEGK QALIVLQKGVELCFPE NETPPEGKNMLIHGRA K G V G K N 0 0 1 0 1 0 4 2 0 0 1 1 0 1 3 0 1 0 0 1 0 0 16 0 1801.8193 Q13535 Q13535 1979 1994 ATR Serine/threonine-protein kinase ATR yes yes 2 0.00086656 97.767 By MS/MS By MS/MS 1 1 13128000 5725300 7402300 2312 2062 2623 6011;6012 5925;5926 5925 7555 2 GVEPSPSPIKPGDIK NRLDGKKKGVEPSPSP PIKPGDIKRGIPNYEF K G V I K R 0 0 0 1 0 0 1 2 0 2 0 2 0 0 4 2 0 0 0 1 0 0 15 1 1519.8246 Q92890;C9JNP9 Q92890 241 255 UFD1L Ubiquitin fusion degradation protein 1 homolog yes no 2 0.0059327 82.259 By matching By MS/MS 1 1 36984000 23963000 13022000 2313 2606 2624 6013;6014 5927 5927 5357 1 GVFSVELTAVSSVHPQDPYLDK MRWVDGHKGVFSVELT PQDPYLDKFFTLVHVL K G V D K F 1 0 0 2 0 1 1 1 1 0 2 1 0 1 2 3 1 0 1 4 0 0 22 0 2387.2009 Q96HP0;K7EP20 Q96HP0 705 726 DOCK6 Dedicator of cytokinesis protein 6 no no 1 NaN 0 0 0 2314 2664 0 GVGGSAERLEESVV GLLGAGCRGVGGSAER ERLEESVV________ R G V V V - 1 1 0 0 0 0 3 3 0 0 1 0 0 0 0 2 0 0 0 3 0 0 14 1 1387.6943 Q6PJG9 Q6PJG9 622 635 LRFN4 Leucine-rich repeat and fibronectin type-III domain-containing protein 4 yes yes 2 0.028149 68.277 By MS/MS 1 2925100 0 2925100 2315 2329 2625 6015 5928 5928 4692 1 GVGSPEPGPTAPYLGR KPDGLRGRGVGSPEPG PTAPYLGRSMSYSSQK R G V G R S 1 1 0 0 0 0 1 4 0 0 1 0 0 0 4 1 1 0 1 1 0 0 16 0 1553.7838 Q9C0B5 Q9C0B5 618 633 ZDHHC5 Palmitoyltransferase ZDHHC5 yes yes 2 5.2854E-16 151.49 By MS/MS By MS/MS 1 1 29571000 16861000 12711000 2316 2790 2626 6016;6017 5929;5930 5929 5802 2 GVGYETILK ________________ VGYETILKEQKGQSMF R G V L K E 0 0 0 0 0 0 1 2 0 1 1 1 0 0 0 0 1 0 1 1 0 0 9 0 978.5386 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84 J9JIE0 6 14 GPRC5C G-protein coupled receptor family C group 5 member C yes no 2 0.01298 82.279 By matching By MS/MS 1 1 7561400 4614400 2947000 2317 301 2627 6018;6019 5931 5931 8024 1 GVHIHQAGGSPPASSTSSSSLTNDVAK APASPTNKGVHIHQAG SLTNDVAKQPVSRDLP K G V A K Q 3 0 1 1 0 1 0 3 2 1 1 1 0 0 2 7 2 0 0 2 0 0 27 0 2591.2576 Q8N122;I3L436 Q8N122 868 894 RPTOR Regulatory-associated protein of mTOR yes no 3 0.0031063 54.465 By MS/MS By MS/MS 1 1 19572000 11742000 7829500 2318 2456 2628 6020;6021 5932;5933 5933 5015 2 GVKTGWSAMVQSRLTATFASR PKGWEWIKGVKTGWSA LTATFASRIQMILLPQ K G V S R I 3 2 0 0 0 1 0 2 0 0 1 1 1 1 0 3 3 1 0 2 0 0 21 2 2253.1688 M0R2I1;M0R0D9 M0R2I1 78 98 ZNF415 yes no 3 0.029554 45.347 By MS/MS 1 0 0 0 2319 1417 2629 6022 5934 5934 496 1 GVLDLDRPGEPAGEESPGPLQER RMKTPTVRGVLDLDRP SPGPLQERSPLLPLPE R G V E R S 1 2 0 2 0 1 4 4 0 0 3 0 0 0 4 1 0 0 0 1 0 0 23 1 2417.1823 Q9UMN6 Q9UMN6 2333 2355 KMT2B Histone-lysine N-methyltransferase 2B yes yes 3 1.16E-05 96.38 By MS/MS By MS/MS 1 1 27700000 17663000 10037000 2320 3054 2630 6023;6024 5935;5936 5936 6441 2 GVLGKSPLSALAR HQKALPKKGVLGKSPL SPLSALARKKARLSLV K G V A R K 2 1 0 0 0 0 0 2 0 0 3 1 0 0 1 2 0 0 0 1 0 0 13 1 1267.7612 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 1285 1297 MYBBP1A Myb-binding protein 1A yes no 2 0.0048575 86.498 By MS/MS By matching 1 1 12526000 7416900 5108800 2321 2741 2631 6025;6026 5937 5937 5688 1 GVLHTFSPSPK RGSATTPRGVLHTFSP HTFSPSPKLQNSASAT R G V P K L 0 0 0 0 0 0 0 1 1 0 1 1 0 1 2 2 1 0 0 1 0 0 11 0 1168.6241 Q86YP4 Q86YP4 540 550 GATAD2A Transcriptional repressor p66-alpha yes yes 2 0.002123 90.709 By matching By MS/MS 1 1 17978000 10391000 7587500 2322 2420 2632 6027;6028 5938 5938 4940 1 GVMAVTAVTATAASDR ADEDDEDRGVMAVTAV TATAASDRMESDSDSD R G V D R M 5 1 0 1 0 0 0 1 0 0 0 0 1 0 0 1 3 0 0 3 0 0 16 0 1519.7664 Q7Z4V5;A0A087WT54 Q7Z4V5 124 139 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 3 0.013136 54.058 By MS/MS 1 3761600 0 3761600 2323 2388 2633 6029 5939 5939 964 4856 1 GVNTFSPEGR LTRSEYDRGVNTFSPE NTFSPEGRLFQVEYAI R G V G R L 0 1 1 0 0 0 1 2 0 0 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1062.5094 P28066 P28066 11 20 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.003425 95.401 By MS/MS By matching 1 1 35419000 16773000 18646000 2324 1770 2634 6030;6031 5940 5940 3336 1 GVPAGNSDTEGGQPGR ISVVSATKGVPAGNSD TEGGQPGRKRRWGAST K G V G R K 1 1 1 1 0 1 1 5 0 0 0 0 0 0 2 1 1 0 0 1 0 0 16 0 1497.6808 S4R3H4;E7EQT4;Q9UKV3;G3V3T3;G3V3B0 S4R3H4 774 789 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 2 0.001203 92.096 By MS/MS By MS/MS 1 1 44916000 23839000 21077000 2325 810;1073 2635 6032;6033 5941;5942;5943 5941 1451 3 GVQKMNSKTVTSTMLGVFR THMCMVMRGVQKMNSK STMLGVFREDPKTREE R G V F R E 0 1 1 0 0 1 0 2 0 0 1 2 2 1 0 2 3 0 0 3 0 0 19 2 2083.0918 P30793 P30793 217 235 GCH1 GTP cyclohydrolase 1 yes yes 2 0.004843 72.705 By MS/MS 1 0 0 0 2326 1780 2636 6034 5944 5944 80 674 3365;7427;7428 1 GVQYLNEIK NILTDITKGVQYLNEI VQYLNEIKDSVVAGFQ K G V I K D 0 0 1 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 1 1 0 0 9 0 1062.571 P13639 P13639 668 676 EEF2 Elongation factor 2 yes yes 2 0.010012 95.909 By MS/MS By MS/MS 1 1 11044000 6525000 4519200 2327 1693 2637 6035;6036 5945;5946 5946 2 GVSALQSELK G V L K 1 0 0 0 0 1 1 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 10 0 1030.5659 REV__H7C1U3 yes no 2 0.010937 73.951 By MS/MS By MS/MS 2 2 11775000 6608400 5166800 + 2328 3188 2638 6037;6038;6039;6040 5947;5948 5947 6785 2 GVSMPNMLEPK MPAMRMDRGVSMPNML MPNMLEPKIFPYEMLM R G V P K I 0 0 1 0 0 0 1 1 0 0 1 1 2 0 2 1 0 0 0 1 0 0 11 0 1201.5835 J3QSX6;F8W8M4;A0A0A0MRL6;O14639 J3QSX6 327 337 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.0014612 90.793 By MS/MS By MS/MS 3 3 52572000 25681000 26891000 2329 220 2639;2640;2641 6041;6042;6043;6044;6045;6046 5949;5950;5951;5952 5950 94;95 386 4 GVSMSLPSSPLLPR TYRVSLAKGVSMSLPS PSSPLLPRQSHLVQSR K G V P R Q 0 1 0 0 0 0 0 1 0 0 3 0 1 0 3 4 0 0 0 1 0 0 14 0 1439.7806 Q9C0D5 Q9C0D5 59 72 TANC1 Protein TANC1 yes yes 2 0.023534 58.32 By MS/MS By matching 1 1 42473000 22637000 19837000 2330 2793 2642 6047;6048 5953 5953 5834;5835 1 GVSNDTSSLETER PPRAKEPRGVSNDTSS TSSLETERGFEELPLC R G V E R G 0 1 1 1 0 0 2 1 0 0 1 0 0 0 0 3 2 0 0 1 0 0 13 0 1393.6321 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;A0A0G2JRR0 A0A0G2JIS2 372 384 EHMT2 yes no 2 0.021663 48.608 By MS/MS 1 2298500 2298500 0 2331 350 2643 6049 5954 5954 623 0 GVSQEKEAQISSAIVSSVQSK GSSQERSRGVSQEKEA IVSSVQSKITQDLMAK R G V S K I 2 0 0 0 0 3 2 1 0 2 0 2 0 0 0 6 0 0 0 3 0 0 21 1 2161.1226 Q12872 Q12872 907 927 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 3 0.00031519 79.942 By MS/MS By MS/MS 1 1 28899000 15347000 13552000 2332 2029 2644 6050;6051 5955;5956 5955 3944 2 GVTIKPTVDDD IGWGQIRRGVTIKPTV IKPTVDDD________ R G V D D - 0 0 0 3 0 0 0 1 0 1 0 1 0 0 1 0 2 0 0 2 0 0 11 1 1158.5768 Q2VIR3;P41091 Q2VIR3 462 472 EIF2S3L;EIF2S3 Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 yes no 2 0.0035907 88.177 By MS/MS 1 5755700 5755700 0 2333 1814 2645 6052 5957 5957 1 GVTIPYRPKPSSSPVIFAGGQDR TLSQSPPKGVTIPYRP IFAGGQDRYSTGSDSA K G V D R Y 1 2 0 1 0 1 0 3 0 2 0 1 0 1 4 3 1 0 1 2 0 0 23 2 2428.2863 Q15366;H3BSS4 Q15366 177 199 PCBP2 Poly(rC)-binding protein 2 yes no 3;4 4.125E-05 100.27 By MS/MS By MS/MS 2 2 361350000 184790000 176560000 2334 2134 2646 6053;6054;6055;6056 5958;5959;5960;5961;5962;5963 5960 4227;4228;4229 6 GVTQEVDGLSQTDGTLTYFDK CIDGHKYKGVTQEVDG GTLTYFDKVDKNREEL K G V D K V 0 0 0 3 0 2 1 3 0 0 2 1 0 1 0 1 4 0 1 2 0 0 21 0 2273.0699 Q8NB49;H7C0E8;A0A067XG54 Q8NB49 436 456 ATP11C Phospholipid-transporting ATPase IG;Phospholipid-transporting ATPase yes no 2 0.0028652 70.453 By MS/MS By MS/MS 1 1 17640000 10080000 7560000 2335 2494 2647 6057;6058 5964;5965 5964 5090;7727;7728;8399 2 GVTQEVDGLSQTDGTLTYFDKVDK CIDGHKYKGVTQEVDG TYFDKVDKNREELFLR K G V D K N 0 0 0 4 0 2 1 3 0 0 2 2 0 1 0 1 4 0 1 3 0 0 24 1 2615.2603 Q8NB49;H7C0E8;A0A067XG54 Q8NB49 436 459 ATP11C Phospholipid-transporting ATPase IG;Phospholipid-transporting ATPase yes no 2;3 1.6728E-05 85.013 By MS/MS By MS/MS 3 3 125090000 63835000 61259000 2336 2494 2648;2649 6059;6060;6061;6062;6063;6064 5966;5967;5968;5969 5966 5090;7727;7728;8399 4 GVVDSDDLPLNVSR PKYLNFVKGVVDSDDL DLPLNVSRETLQQHKL K G V S R E 0 1 1 3 0 0 0 1 0 0 2 0 0 0 1 2 0 0 0 3 0 0 14 0 1484.7471 P14625 P14625 435 448 HSP90B1 Endoplasmin yes yes 2 2.4275E-20 158.06 By MS/MS By MS/MS 1 1 44495000 23872000 20624000 2337 1701 2650 6065;6066 5970;5971 5970 2 GVVDSEDLPLNISR PEYLNFIRGVVDSEDL DLPLNISREMLQQSKI R G V S R E 0 1 1 2 0 0 1 1 0 1 2 0 0 0 1 2 0 0 0 2 0 0 14 0 1512.7784 P07900;P08238 P08238 379 392 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 2 3.4059E-150 254.07 By MS/MS By MS/MS 1 1 139060000 50049000 89006000 2338 1658;1656 2651 6067;6068 5972;5973 5973 2 GVVIPTWNISPIKK KLKEVVEKGVVIPTWN WNISPIKKANEIKPPQ K G V K K A 0 0 1 0 0 0 0 1 0 3 0 2 0 0 2 1 1 1 0 2 0 0 14 1 1550.9184 A0A087WUE6;Q3T8J9;A4PB68 A0A087WUE6 337 350 GON4L GON-4-like protein yes no 2;3 0.00017922 105.66 By MS/MS By MS/MS 2 2 25936000 14813000 11123000 2339 54 2652 6069;6070;6071;6072 5974;5975;5976;5977;5978 5975 94 5 GVVPLAGTNGETTTQGLDGLSER VVGIKVDKGVVPLAGT GLDGLSERCAQYKKDG K G V E R C 1 1 1 1 0 1 2 5 0 0 3 0 0 0 1 1 4 0 0 2 0 0 23 0 2271.1343 J3KPS3;P04075;H3BQN4;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 J3KPS3 112 134 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0074533 67.648 By matching By MS/MS 1 1 17379000 6295800 11083000 2340 1327 2653 6073;6074 5979 5979 1 GVVTNGLDLSPADEK GSGREEEKGVVTNGLD DLSPADEKKGGDKSEE K G V E K K 1 0 1 2 0 0 1 2 0 0 2 1 0 0 1 1 1 0 0 2 0 0 15 0 1513.7624 E7ESP9;P07197;E7EMV2 E7ESP9 789 803 NEFM Neurofilament medium polypeptide yes no 2 0.0084722 78.191 By MS/MS By MS/MS 1 1 7876800 3444800 4432000 2341 817 2654 6075;6076 5980;5981 5980 1479 0 GWAFGSNSLPIAGSVGMGVAR MQNYRQQKGWAFGSNS SVGMGVARRTQRQFPM K G W A R R 3 1 1 0 0 0 0 5 0 1 1 0 1 1 1 3 0 1 0 2 0 0 21 0 2033.0153 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 550 570 SAMD4B Protein Smaug homolog 2 yes no 2 0.00059755 74.769 By MS/MS 1 19301000 0 19301000 2342 1411 2655 6077 5982 5982 490 2586 1 GWEEGVAQMSVGQRAK LGKQEVIRGWEEGVAQ MSVGQRAKLTISPDYA R G W A K L 2 1 0 0 0 2 2 3 0 0 0 1 1 0 0 1 0 1 0 2 0 0 16 1 1731.8363 Q1JUQ5;Q5W0X3;P62942 Q1JUQ5 43 58 FKBP12-Exip2;FKBP1A Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP1A yes no 2 0.013774 67.93 By MS/MS 1 0 0 0 2343 1951 2656 6078 5983 5983 3737 1 GWLRDPSASPGDAGEQAIR DSKLNQAKGWLRDPSA DAGEQAIRQILDEAGK K G W I R Q 3 2 0 2 0 1 1 3 0 1 1 0 0 0 2 2 0 1 0 0 0 0 19 1 1981.9606 P18206 P18206 282 300 VCL Vinculin yes yes 3 0.0043524 61.903 By matching By MS/MS 1 1 13006000 5498800 7507100 2344 1723 2657 6079;6080 5984 5984 3237 1 GWLVLCVLAISLASMVTEDLCR ________________ MVTEDLCRAPDGKKGE R G W C R A 2 1 0 1 2 0 1 1 0 1 5 0 1 0 0 2 1 1 0 3 0 0 22 0 2505.2794 X6RLJ0;P02745 X6RLJ0 6 27 C1QA Complement C1q subcomponent subunit A yes no 3 0.017054 44.1 By MS/MS 1 7838400 7838400 0 2345 1630 2658 6081 5985 5985 584 3078 1 GWSQEGPVK EDGSTLFRGWSQEGPV WSQEGPVKSPAECREE R G W V K S 0 0 0 0 0 1 1 2 0 0 0 1 0 0 1 1 0 1 0 1 0 0 9 0 986.48214 Q9C0C2;E9PKK0 Q9C0C2 219 227 TNKS1BP1 182 kDa tankyrase-1-binding protein yes no 2 0.006094 84.743 By MS/MS By MS/MS 1 1 65313000 33942000 31371000 2346 2791 2659 6082;6083 5986;5987 5986 5817 2 GYALVPIIVNSSTPK SDDELSGKGYALVPII IVNSSTPKSKTVESAE K G Y P K S 1 0 1 0 0 0 0 1 0 2 1 1 0 0 2 2 1 0 1 2 0 0 15 0 1557.8766 F8WF45;P82094 F8WF45 352 366 TMF1 TATA element modulatory factor yes no 2 0.00023045 115.29 By MS/MS By matching 1 1 10008000 5414800 4592900 2347 1058 2660 6084;6085 5988 5988 1998 1 GYDVIAQAQSGTGK RAILPCIKGYDVIAQA QAQSGTGKTATFAISI K G Y G K T 2 0 0 1 0 2 0 3 0 1 0 1 0 0 0 1 1 0 1 1 0 0 14 0 1393.6838 P60842;J3QR64;J3KTB5;J3QL43;J3QS69;J3KT12;E7EQG2;Q14240;J3QLN6;J3KT04;J3KS93;E7EMV8;J3KSN7;J3QKZ9;J3KS25 P60842 69 82 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.014439 77.279 By MS/MS 1 5735700 5735700 0 2348 1929 2661 6086 5989 5989 1 GYESPTLSK NRLPTYFRGYESPTLS YESPTLSKDYEGYPAP R G Y S K D 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 2 1 0 1 0 0 0 9 0 980.48148 Q68DQ2 Q68DQ2 1931 1939 CRYBG3 Very large A-kinase anchor protein yes yes 2 0.0045655 101.38 By MS/MS By MS/MS 1 1 5835500 3355300 2480200 2349 2296 2662 6087;6088 5990;5991 5990 4616 2 GYFEYIEENK RPREDHGRGYFEYIEE FEYIEENKYSRAKSPQ R G Y N K Y 0 0 1 0 0 0 3 1 0 1 0 1 0 1 0 0 0 0 2 0 0 0 10 0 1290.5768 Q00839;Q5RI18 Q00839 256 265 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 2 1.8484E-16 106.68 By MS/MS By MS/MS 1 1 8449100 4072400 4376800 2350 1976 2663 6089;6090 5992;5993 5992 1 GYKEEEFNWQTYLK GHKLHPPKGYKEEEFN FNWQTYLKTCKAQAAP K G Y L K T 0 0 1 0 0 1 3 1 0 0 1 2 0 1 0 0 1 1 2 0 0 0 14 1 1833.8574 Q96JM7 Q96JM7 334 347 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 yes yes 2 0.016661 57.034 By MS/MS By matching 1 1 95863000 42282000 53581000 2351 2675 2664 6091;6092 5994 5994 8426 1 GYLPLPR APGHPLAKGYLPLPRG KGYLPLPRGAPVGKES K G Y P R G 0 1 0 0 0 0 0 1 0 0 2 0 0 0 2 0 0 0 1 0 0 0 7 0 814.47012 Q9Y5Y0 Q9Y5Y0 21 27 FLVCR1 Feline leukemia virus subgroup C receptor-related protein 1 yes yes 2 0.011524 122.5 By matching By MS/MS 1 1 21873000 13168000 8704200 2352 3138 2665 6093;6094 5995 5995 8513 1 GYMMMFPR RSPFEDSRGYMMMFPR GYMMMFPRVSPPPAPS R G Y P R V 0 1 0 0 0 0 0 1 0 0 0 0 3 1 1 0 0 0 1 0 0 0 8 0 1031.4391 O14654 O14654 742 749 IRS4 Insulin receptor substrate 4 yes yes 2 0.00094415 132.94 By MS/MS By MS/MS 6 6 138550000 72652000 65897000 2353 1453 2666;2667;2668 6095;6096;6097;6098;6099;6100;6101;6102;6103;6104;6105;6106 5996;5997;5998;5999;6000;6001;6002;6003;6004;6005;6006 6004 518;519;520 8180 9 GYNDDYYEESYFTTR DALLYQSKGYNDDYYE EESYFTTRTYGEPESA K G Y T R T 0 1 1 2 0 0 2 1 0 0 0 0 0 1 0 1 2 0 4 0 0 0 15 0 1921.7643 P50402;Q5HY57 P50402 89 103 EMD Emerin yes no 2 1.3219E-15 149.41 By MS/MS By MS/MS 2 2 80701000 39191000 41510000 2354 1867 2669 6107;6108;6109;6110 6007;6008;6009;6010 6010 8289;8290 4 GYSFTTTAER LMKILTERGYSFTTTA SFTTTAEREIVRDIKE R G Y E R E 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 1 3 0 1 0 0 0 10 0 1131.5197 P63261;P60709;I3L3I0;I3L1U9;I3L4N8 P63261 197 206 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2 0.0068607 97.635 By MS/MS By MS/MS 2 2 140250000 45854000 94399000 2355 1928 2670;2671 6111;6112;6113;6114 6011;6012;6013 6011 7498;7499 3 GYSSLDQSPDEKPLVALDTDSDDDFDMSR TRLVVPNKGYSSLDQS DDDFDMSRYSSSGYSS K G Y S R Y 1 1 0 8 0 1 1 1 0 0 3 1 1 1 2 5 1 0 1 1 0 0 29 1 3217.3881 A0A0A0MRW1;Q5T586;A0A0A0MRW2;Q5T593;A0A0A0MRW0;A0A0A0MRW3;Q8IW50 A0A0A0MRW1 66 94 FAM219A Protein FAM219A yes no 3 0.0022268 66.925 By MS/MS 1 0 0 0 2356 233 2672 6115 6014 6014 99 409;6899 1 GYTSDDDTWEPEIHLEDCK VLYKVRWKGYTSDDDT EIHLEDCKEVLLEFRK K G Y C K E 0 0 0 4 1 0 3 1 1 1 1 1 0 0 1 1 2 1 1 0 0 0 19 0 2308.943 Q99549 Q99549 82 100 MPHOSPH8 M-phase phosphoprotein 8 yes yes 2;3 0.00024535 116.63 By MS/MS By MS/MS 2 2 114010000 61896000 52113000 2357 2724 2673 6116;6117;6118;6119 6015;6016;6017;6018 6015 5655 4 GYTSDSEVYTDHGRPGK QNDVSLDRGYTSDSEV TDHGRPGKIHRSATDA R G Y G K I 0 1 0 2 0 0 1 3 1 0 0 1 0 0 1 2 2 0 2 1 0 0 17 1 1867.8337 Q92538 Q92538 1315 1331 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 3 0.00011589 102.63 By MS/MS By MS/MS 1 1 156320000 85764000 70561000 2358 2580 2674 6120;6121 6019;6020 6019 5296 2 GYVLGETSNLPSPGK LVIPFSGKGYVLGETS SNLPSPGKLITSHAIN K G Y G K L 0 0 1 0 0 0 1 3 0 0 2 1 0 0 2 2 1 0 1 1 0 0 15 0 1517.7726 B1AKT1;Q9H040 B1AKT1 153 167 SPRTN SprT-like domain-containing protein Spartan yes no 2 0.0035329 86.291 By MS/MS By MS/MS 1 1 16460000 6307000 10153000 2359 524 2675 6122;6123 6021;6022 6021 985;6983 1 HAASYSSDSENQGSYSGVIPPPPGR SKNEQESRHAASYSSD VIPPPPGRGQVKKGSV R H A G R G 2 1 1 1 0 1 1 3 1 1 0 0 0 0 4 6 0 0 2 1 0 0 25 0 2559.1626 Q96D71;E9PMG1;H0YDT0;F2Z3L2 Q96D71 112 136 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 3 0.0031278 55.819 By MS/MS By matching 1 1 14359000 7352300 7006600 2360 2635 2676 6124;6125 6023 6023 5416 1 HAPSPEPAVQGTGVAGVPEESGDAAAIPAK SPSPARKRHAPSPEPA DAAAIPAKKAPAGQEE R H A A K K 7 0 0 1 0 1 3 4 1 1 0 1 0 0 5 2 1 0 0 3 0 0 30 0 2809.3883 P13051 P13051 20 49 UNG Uracil-DNA glycosylase yes yes 3 1.6867E-05 76.106 By MS/MS By MS/MS 1 1 221210000 115900000 105310000 2361 1691 2677 6126;6127 6024;6025;6026;6027 6027 3190 4 HAPSPEPAVQGTGVAGVPEESGDAAAIPAKK SPSPARKRHAPSPEPA AAAIPAKKAPAGQEEP R H A K K A 7 0 0 1 0 1 3 4 1 1 0 2 0 0 5 2 1 0 0 3 0 0 31 1 2937.4832 P13051 P13051 20 50 UNG Uracil-DNA glycosylase yes yes 4 0.00010922 63.297 By MS/MS By matching 1 1 17233000 8677200 8555800 2362 1691 2678 6128;6129 6028 6028 3190 1 HAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPR SITQSNEKHAPTYTIP QVPPSLPRNSTMMQAV K H A P R N 4 1 0 0 0 1 1 0 1 1 4 0 0 0 9 3 4 0 1 2 0 0 32 0 3317.8024 Q9NPI6 Q9NPI6 306 337 DCP1A mRNA-decapping enzyme 1A yes yes 3;4 2.1115E-10 93.411 By MS/MS By MS/MS 2 2 211150000 114850000 96306000 2363 2890 2679 6130;6131;6132;6133 6029;6030;6031 6031 6081;6082 3 HASPILPITEFSDIPR NRVTGNFKHASPILPI TEFSDIPRRAPKKPLT K H A P R R 1 1 0 1 0 0 1 0 1 3 1 0 0 1 3 2 1 0 0 0 0 0 16 0 1791.9519 G5E972;P42167;H0YJH7 G5E972 264 279 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2;3 5.1675E-42 176.42 By MS/MS By MS/MS 2 2 164300000 100690000 63614000 2364 1097 2680 6134;6135;6136;6137 6032;6033;6034;6035 6033 2063 4 HCGLSLSSTPPGK ADEEEFSKHCGLSLSS LSSTPPGKEAKRSSDT K H C G K E 0 0 0 0 1 0 0 2 1 0 2 1 0 0 2 3 1 0 0 0 0 0 13 0 1339.6554 D6R9S4;Q09GN1;Q71F23 D6R9S4 61 73 CENPU;MLF1IP Centromere protein U yes no 3 0.0057323 63.602 By matching By MS/MS 1 1 7366900 3633800 3733100 2365 731 2681 6138;6139 6036 6036 1329;7050 1 HDELEAPSMKTVAHVCNTRTLGR LQLVVTDKHDELEAPS CNTRTLGR________ K H D G R - 2 2 1 1 1 0 2 1 2 0 2 1 1 0 1 1 3 0 0 2 0 0 23 2 2621.2802 G8JLN4 G8JLN4 121 143 VSTM1 yes yes 3 0.031839 44.238 By MS/MS 1 6135500 6135500 0 2366 1110 2682 6140 6037 6037 1 HDSIPAADTFEDLSDVEGGGSEPTQR EDLRRSVKHDSIPAAD GGSEPTQRDAGSRDEK K H D Q R D 2 1 0 4 0 1 3 3 1 1 1 0 0 1 2 3 2 0 0 1 0 0 26 0 2729.2053 O95671 O95671 226 251 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 3 9.6213E-30 156.03 By MS/MS By MS/MS 1 1 162320000 97095000 65224000 2367 1603 2683 6141;6142 6038;6039 6039 3038 2 HDSPDPSPPR TSPPRRARHDSPDPSP SPDPSPPRRPQHNSSG R H D P R R 0 1 0 2 0 0 0 0 1 0 0 0 0 0 4 2 0 0 0 0 0 0 10 0 1103.4996 Q9BRD0 Q9BRD0 195 204 BUD13 BUD13 homolog yes no 2 0.021329 63.662 By MS/MS By matching 1 1 9473600 5419600 4053900 2368 2742 2684 6143;6144 6040 6040 5692;5693 0 HDSPDPSPPRR TSPPRRARHDSPDPSP PDPSPPRRPQHNSSGA R H D R R P 0 2 0 2 0 0 0 0 1 0 0 0 0 0 4 2 0 0 0 0 0 0 11 1 1259.6007 Q9BRD0 Q9BRD0 195 205 BUD13 BUD13 homolog yes no 2 0.02874 59.116 By MS/MS 1 1803800 1803800 0 2369 2742 2685 6145 6041 6041 5692;5693 0 HDSPEDVK CMMAQYNRHDSPEDVK HDSPEDVKRRAMADPE R H D V K R 0 0 0 2 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 8 0 925.41412 P31948;H0YGI8 P31948 479 486 STIP1 Stress-induced-phosphoprotein 1 yes no 2 0.0095003 95.523 By MS/MS By MS/MS 2 1 14954000 9132000 5822200 2370 1787 2686 6146;6147;6148 6042;6043;6044 6042 3372 3 HDTPDPSPLR DPSPRRARHDTPDPSP TPDPSPLRGARHDSDT R H D L R G 0 1 0 2 0 0 0 0 1 0 1 0 0 0 3 1 1 0 0 0 0 0 10 0 1133.5465 Q9BRD0 Q9BRD0 157 166 BUD13 BUD13 homolog yes yes 2 0.011904 93.766 By MS/MS By MS/MS 2 1 64030000 36349000 27681000 2371 2742 2687;2688 6149;6150;6151 6045;6046;6047;6048 6046 5694;7823 3 HDTPDSSPR LPSNRHFRHDTPDSSP DTPDSSPRRVRHGTPD R H D P R R 0 1 0 2 0 0 0 0 1 0 0 0 0 0 2 2 1 0 0 0 0 0 9 0 1010.4417 Q9BRD0 Q9BRD0 121 129 BUD13 BUD13 homolog yes yes 2 0.0027325 110.54 By MS/MS By matching 1 1 7672500 4809900 2862600 2372 2742 2689 6152;6153 6049 6049 5695 1 HEDEQALLDQNSQTPPPSPFSVQAFNK RGGNQYLRHEDEQALL FSVQAFNKGASCSAQG R H E N K G 2 0 2 2 0 4 2 0 1 0 2 1 0 2 4 3 1 0 0 1 0 0 27 0 3023.4261 O75592;A0A087WY34 O75592 2632 2658 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes no 3 0.0022323 60.207 By matching By MS/MS 1 1 24467000 12500000 11967000 2373 1550 2690 6154;6155 6050 6050 2932;7342 1 HEEEEWTDDDLVESL DYVSKKSKHEEEEWTD DDDLVESL________ K H E S L - 0 0 0 3 0 0 5 0 1 0 2 0 0 0 0 1 1 1 0 1 0 0 15 0 1844.7588 D6RHI7;P51946 D6RHI7 235 249 CCNH Cyclin-H yes no 2 4.7219E-10 137.95 By MS/MS 1 10476000 0 10476000 2374 766 2691 6156 6051 6051 7056 1 HELSPPQKR RERFSPPRHELSPPQK ELSPPQKRMRRDWDEH R H E K R M 0 1 0 0 0 1 1 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1090.5883 Q9BXP5;C9JUL9 Q9BXP5 71 79 SRRT Serrate RNA effector molecule homolog yes no 2 0.016535 73.9 By matching By MS/MS 1 1 16370000 9305700 7064700 2375 2772 2692 6157;6158 6052 6052 5771 1 HEYALPLAPPEPEYATPIVER DCPQRAGRHEYALPLA YATPIVERHVLRAHTF R H E E R H 3 1 0 0 0 0 4 0 1 1 2 0 0 0 5 0 1 0 2 1 0 0 21 0 2391.2111 Q8N8Z6 Q8N8Z6 587 607 DCBLD1 Discoidin, CUB and LCCL domain-containing protein 1 yes yes 3 0.0014986 64.522 By MS/MS By MS/MS 1 1 27634000 11009000 16625000 2376 2487 2693 6159;6160 6053;6054;6055 6054 8397;8398 3 HFEASCGQLSPAR NKATKILRHFEASCGQ CGQLSPARGTSAEPGP R H F A R G 2 1 0 0 1 1 1 1 1 0 1 0 0 1 1 2 0 0 0 0 0 0 13 0 1458.6674 A0A1B0GV70;Q96N21 A0A1B0GV70 415 427 ENTHD2 AP-4 complex accessory subunit tepsin yes no 2 0.00082652 97.203 By MS/MS By MS/MS 1 1 10970000 5497300 5473200 2377 427 2694 6161;6162 6056;6057 6056 799;800 2 HFKDEDEDEDVASPDGLGR ARRNGQEKHFKDEDED ASPDGLGRLNVAGAGG K H F G R L 1 1 0 5 0 0 3 2 1 0 1 1 0 1 1 1 0 0 0 1 0 0 19 1 2129.9138 O95365 O95365 537 555 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 3 0.0015026 70.391 By MS/MS By MS/MS 1 1 23535000 12585000 10950000 2378 1591 2695 6163;6164 6058;6059;6060 6060 3017 3 HFLNSMKNK MPKQTWKKHFLNSMKN FLNSMKNKILTQRLSD K H F N K I 0 0 2 0 0 0 0 0 1 0 1 2 1 1 0 1 0 0 0 0 0 0 9 1 1117.5702 E5RHP1;A8MYU2 E5RHP1 516 524 KCNU1 Potassium channel subfamily U member 1 yes no 3 0.027608 41.399 By MS/MS 1 0 0 0 2379 506 2696 6165 6061 6061 201 925 1 HFSQSEETGNEVFGALNEEQPLPR LPRSTRVRHFSQSEET NEEQPLPRSSSTSDIL R H F P R S 1 1 2 0 0 2 5 2 1 0 2 0 0 2 2 2 1 0 0 1 0 0 24 0 2714.2572 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 771 794 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 3 1.7334E-05 82.986 By MS/MS By MS/MS 1 1 54252000 25853000 28399000 2380 420 2697 6166;6167 6062;6063 6062 782;783 2 HFSTLKDDDLVEFSDLESEDDERPR PRVRKQTRHFSTLKDD SEDDERPRSRRHDRHH R H F P R S 0 2 0 6 0 0 4 0 1 0 3 1 0 2 1 3 1 0 0 1 0 0 25 2 2993.3527 Q9HCK8;H0YJG4 Q9HCK8 1407 1431 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes no 3;4 0.015446 50.055 By MS/MS By MS/MS 2 1 69855000 45855000 24000000 2381 2877 2698 6168;6169;6170 6064;6065 6064 6057;6058 2 HGESAWNLENR AYKLVLIRHGESAWNL SAWNLENRFSGWYDAD R H G N R F 1 1 2 0 0 0 2 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 11 0 1311.5956 P18669 P18669 11 21 PGAM1 Phosphoglycerate mutase 1 yes yes 2 8.1292E-05 120.9 By MS/MS By MS/MS 1 1 55225000 30904000 24322000 2382 1728 2699 6171;6172 6066;6067 6066 3258 2 HGGPGPGGPEPELSPITEGSEAR IISRLFHRHGGPGPGG ITEGSEARAGPPAPAP R H G A R A 1 1 0 0 0 0 4 6 1 1 1 0 0 0 5 2 1 0 0 0 0 0 23 0 2227.0505 Q8WUF5 Q8WUF5 554 576 PPP1R13L RelA-associated inhibitor yes yes 3 0.0084312 50.172 By MS/MS By matching 1 1 11456000 5679500 5776300 2383 2554 2700 6173;6174 6068 6068 5215 1 HGGSPQPLATTPLSQEPVNPPSEASPTR PTPLLAERHGGSPQPL PSEASPTRDRSPPKSP R H G T R D 2 1 1 0 0 2 2 2 1 0 2 0 0 0 7 4 3 0 0 1 0 0 28 0 2851.41 Q9UQ35;I3L4D8;I3L182 Q9UQ35 374 401 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 4.7145E-34 160.21 By MS/MS By MS/MS 9 10 1501700000 757120000 744590000 2384 3074 2701;2702;2703;2704 6175;6176;6177;6178;6179;6180;6181;6182;6183;6184;6185;6186;6187;6188;6189;6190;6191;6192;6193 6069;6070;6071;6072;6073;6074;6075;6076;6077;6078;6079;6080;6081;6082;6083;6084;6085;6086;6087;6088;6089;6090;6091;6092;6093;6094;6095;6096 6092 6525;6526;6527;6528;7925;7926;7927 27 HGGTIPIVPTAEFQDR SLERKFGKHGGTIPIV PTAEFQDRISGASEKD K H G D R I 1 1 0 1 0 1 1 2 1 2 0 0 0 1 2 0 2 0 0 1 0 0 16 0 1736.8846 P00367 P00367 481 496 GLUD1 Glutamate dehydrogenase 1, mitochondrial yes yes 3 0.010391 68.751 By MS/MS 1 0 0 0 2385 1622 2705 6194 6097 6097 1 HGGVCAPAAVATSPPGAIPK HGAEEECRHGGVCAPA SPPGAIPKEACGGAPL R H G P K E 5 0 0 0 1 0 0 3 1 1 0 1 0 0 4 1 1 0 0 2 0 0 20 0 1856.9567 Q9Y6A5 Q9Y6A5 238 257 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 2;3 0.00021371 86.761 By MS/MS By MS/MS 2 2 38439000 19470000 18969000 2386 3146 2706 6195;6196;6197;6198 6098;6099;6100 6099 6729;7957 3 HGLLLPASPVR NSTTFPSRHGLLLPAS LLPASPVRMHSSRLHQ R H G V R M 1 1 0 0 0 0 0 1 1 0 3 0 0 0 2 1 0 0 0 1 0 0 11 0 1158.6873 Q96E09 Q96E09 69 79 FAM122A Protein FAM122A yes yes 2;3 0.0014898 102.87 By MS/MS By MS/MS 2 2 152770000 85361000 67406000 2387 2640 2707 6199;6200;6201;6202 6101;6102;6103;6104 6101 5437 4 HGLQLGAQSPGR LEKHVQVRHGLQLGAQ LGAQSPGRGTTLARGS R H G G R G 1 1 0 0 0 2 0 3 1 0 2 0 0 0 1 1 0 0 0 0 0 0 12 0 1219.6422 Q8N1G0;A6PVV7 Q8N1G0 1049 1060 ZNF687 Zinc finger protein 687 yes no 2;3 0.00046153 111.88 By MS/MS By MS/MS 2 2 51019000 29107000 21911000 2388 2458 2708 6203;6204;6205;6206 6105;6106;6107 6105 5025 3 HGLTSGSASPPPPALPLYPDPVR PAPSSSPKHGLTSGSA PLYPDPVRLIRYSIKC K H G V R L 2 1 0 1 0 0 0 2 1 0 3 0 0 0 7 3 1 0 1 1 0 0 23 0 2325.2117 H0YM74;Q92610 H0YM74 683 705 ZNF592 Zinc finger protein 592 yes no 3 3.2187E-05 91.202 By MS/MS By MS/MS 1 1 21999000 13580000 8418700 2389 1216 2709 6207;6208 6108;6109 6108 2271;2272;2273;7222 2 HGSFHEDEDPIGSPR TGGSPSVRHGSFHEDE EDPIGSPRLLSVKGSP R H G P R L 0 1 0 2 0 0 2 2 2 1 0 0 0 1 2 2 0 0 0 0 0 0 15 0 1678.7336 Q96T58 Q96T58 1266 1280 SPEN Msx2-interacting protein yes yes 3 0.016164 51.127 By MS/MS By matching 1 1 24155000 12396000 11759000 2390 2716 2710 6209;6210 6110 6110 5630 1 HGSFVNKPTR LGGEEWTRHGSFVNKP SFVNKPTRGWLHPNDK R H G T R G 0 1 1 0 0 0 0 1 1 0 0 1 0 1 1 1 1 0 0 1 0 0 10 1 1141.5992 P29353;Q5T181;Q5T182 P29353 137 146 SHC1 SHC-transforming protein 1 yes no 3 0.0126 57.106 By MS/MS By matching 1 1 15732000 8076600 7655400 2391 1774 2711 6211;6212 6111 6111 3340 1 HGSGADSDYENTQSGDPLLGLEGK RHTSKLSRHGSGADSD PLLGLEGKRFLELGKE R H G G K R 1 0 1 3 0 1 2 5 1 0 3 1 0 0 1 3 1 0 1 0 0 0 24 0 2446.0884 J3QRU8;Q9Y2X7;J3QL89;A0A0C4DGN6 J3QRU8 590 613 GIT1 ARF GTPase-activating protein GIT1 yes no 3 4.3502E-06 110.14 By MS/MS By MS/MS 1 1 19876000 8664400 11211000 2392 1356 2712 6213;6214 6112;6113 6113 2504 2 HGSGPNIILTGDSSPGFSK QNLTHCSRHGSGPNII DSSPGFSKEIAAALAG R H G S K E 0 0 1 1 0 0 0 4 1 2 1 1 0 1 2 4 1 0 0 0 0 0 19 0 1869.9221 Q53ET0;Q5T4K5 Q53ET0 611 629 CRTC2 CREB-regulated transcription coactivator 2 yes no 2 0.0071291 63.936 By MS/MS By MS/MS 2 1 31869000 21596000 10273000 2393 2200 2713;2714 6215;6216;6217 6114;6115 6114 4401;4402;4403 2 HGSPEFCGILGER GGGFKPIKHGSPEFCG FCGILGERVDPAVPLE K H G E R V 0 1 0 0 1 0 2 3 1 1 1 0 0 1 1 1 0 0 0 0 0 0 13 0 1457.6721 Q15464 Q15464 386 398 SHB SH2 domain-containing adapter protein B yes yes 2 0.0026066 86.498 By MS/MS By MS/MS 1 1 7785600 4012400 3773300 2394 2142 2715 6218;6219 6116;6117 6117 4252 2 HGSVSADEAAR ________________ VSADEAARTAPFHLDL R H G A R T 3 1 0 1 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1098.5054 A0A1B0GU90;A0A1B0GW73;H3BNF1;A0A1B0GTV3;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;Q9NWW5 A0A1B0GU90 5 15 CLN6 Ceroid-lipofuscinosis neuronal protein 6 yes no 2 0.020778 64.65 By MS/MS 1 3574600 0 3574600 2395 377 2716 6220 6118 6118 693 1 HGSYEDAVHSGALND HPESKDDKHGSYEDAV VHSGALND________ K H G N D - 2 0 1 2 0 0 1 2 2 0 1 0 0 0 0 2 0 0 1 1 0 0 15 0 1570.6648 F5H282;E7EQR6;P17987 F5H282 318 332 TCP1 T-complex protein 1 subunit alpha yes no 2 0.026111 60.55 By MS/MS By matching 1 1 10662000 4000700 6660900 2396 809 2717 6221;6222 6119 6119 1444 1 HGTDLWIDNMSSAVPNHSPEKK LGSAALARHGTDLWID PNHSPEKKDSDFFTEH R H G K K D 1 0 2 2 0 0 1 1 2 1 1 2 1 0 2 3 1 1 0 1 0 0 22 1 2462.1649 Q8N6H7;H0YF45;E9PJT7;E9PK28;E9PN48;E9PIY6 Q8N6H7 129 150 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 3 0.00029269 109.5 By MS/MS By MS/MS 2 2 37340000 22141000 15199000 2397 2479 2718;2719 6223;6224;6225;6226 6120;6121;6122 6120 1007 5069 3 HIDSSPYSPAYLSPPPESSWR SPLRRYTRHIDSSPYS PPPESSWRRTMAWGNF R H I W R R 1 1 0 1 0 0 1 0 1 1 1 0 0 0 5 6 0 1 2 0 0 0 21 0 2372.1073 Q53ET0;H0YDQ8 Q53ET0 124 144 CRTC2 CREB-regulated transcription coactivator 2 yes no 3 0.00093195 68.916 By MS/MS By MS/MS 2 1 15289000 4301500 10987000 2398 2200 2720 6227;6228;6229 6123;6124;6125 6125 4404 3 HIEPELAGRDSPIR LTTSLFPRHIEPELAG AGRDSPIRAEMPGNLQ R H I I R A 1 2 0 1 0 0 2 1 1 2 1 0 0 0 2 1 0 0 0 0 0 0 14 1 1588.8322 P86791;P86790 P86791 256 269 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B yes no 3 0.0076337 63.181 By matching By MS/MS 1 1 15662000 9230000 6431600 2399 1969 2721 6230;6231 6126 6126 3768 1 HIISATSLSTSPTELGSR SWREGGGRHIISATSL SPTELGSRNSSTGDGA R H I S R N 1 1 0 0 0 0 1 1 1 2 2 0 0 0 1 5 3 0 0 0 0 0 18 0 1855.964 Q5JSZ5 Q5JSZ5 216 233 PRRC2B Protein PRRC2B yes yes 2;3 1.4403E-185 256.33 By MS/MS By MS/MS 2 2 95309000 54794000 40514000 2400 2220 2722 6232;6233;6234;6235 6127;6128;6129;6130;6131 6130 4441;7636 5 HIKEEPLSEEEPCTSTAIASPEK KKKRGKKKHIKEEPLS TAIASPEKKKKKKKKR K H I E K K 2 0 0 0 1 0 6 0 1 2 1 2 0 0 3 3 2 0 0 0 0 0 23 1 2581.2218 Q9Y2X3 Q9Y2X3 495 517 NOP58 Nucleolar protein 58 yes yes 3 1.8154E-05 94.356 By MS/MS By MS/MS 1 1 262530000 146280000 116250000 2401 3098 2723 6236;6237 6132;6133 6133 6656;6657;6658 2 HIKEEPLSEEEPCTSTAIASPEKK KKKRGKKKHIKEEPLS AIASPEKKKKKKKKRE K H I K K K 2 0 0 0 1 0 6 0 1 2 1 3 0 0 3 3 2 0 0 0 0 0 24 2 2709.3167 Q9Y2X3 Q9Y2X3 495 518 NOP58 Nucleolar protein 58 yes yes 3;4 1.2164E-05 108.96 By MS/MS By MS/MS 4 3 843620000 353400000 490230000 2402 3098 2724;2725 6238;6239;6240;6241;6242;6243;6244 6134;6135;6136;6137;6138;6139;6140 6140 6656;6657;6658 7 HISLTLPATFR TPAPNLPRHISLTLPA LTLPATFRGRNSTRTD R H I F R G 1 1 0 0 0 0 0 0 1 1 2 0 0 1 1 1 2 0 0 0 0 0 11 0 1254.7085 Q9H7P6 Q9H7P6 222 232 MVB12B Multivesicular body subunit 12B yes yes 2 0.013607 70.089 By MS/MS By MS/MS 1 1 9515200 4165900 5349400 2403 2850 2726 6245;6246 6141;6142 6142 6002 2 HIVSNDSSDSDDESHEPK ELENITTKHIVSNDSS DDESHEPKGTENEDAG K H I P K G 0 0 1 4 0 0 2 0 2 1 0 1 0 0 1 5 0 0 0 1 0 0 18 0 1996.8246 P47712 P47712 428 445 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 3 0.00070938 77.689 By MS/MS By matching 1 1 12989000 7066700 5922300 2404 1842 2727 6247;6248 6143 6143 3532 1 HKSSSSFTPFIDPR SASSTLQKHKSSSSFT FTPFIDPRLLQISPSS K H K P R L 0 1 0 1 0 0 0 0 1 1 0 1 0 2 2 4 1 0 0 0 0 0 14 1 1604.7947 C9J840;E7EX83;A0A0D9SG62;H7C0P6;E7ENQ1;G3XAA2;H7C360;G5E948;E7EN19;A0A0D9SEY1;O95819 C9J840 598 611 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 3 0.017688 54.004 By MS/MS 1 2970000 2970000 0 2405 338 2728 6249 6144 6144 597;598 1 HKTLNLTSMATK QPSLPFIRHKTLNLTS NLTSMATKIIGSPETK R H K T K I 1 0 1 0 0 0 0 0 1 0 2 2 1 0 0 1 3 0 0 0 0 0 12 1 1343.7231 E9PMS6;H0YDG6 E9PMS6 706 717 LMO7 yes no 3 0.021822 43.897 By MS/MS 1 3202100 3202100 0 2406 915 2729 6250 6145 6145 345 1 HLAESESLLTSPPK EGVMHQVKHLAESESL SLLTSPPKACTNGSGS K H L P K A 1 0 0 0 0 0 2 0 1 0 3 1 0 0 2 3 1 0 0 0 0 0 14 0 1507.7882 Q14669 Q14669 932 945 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 2 3.8877E-05 95.195 By MS/MS By matching 1 1 14067000 6386500 7680000 2407 2095 2730 6251;6252 6146 6146 4129 0 HLAPPPLLSPLLPSIKPTVR PLNSQSQKHLAPPPLL PSIKPTVRKTRQDGSQ K H L V R K 1 1 0 0 0 0 0 0 1 1 5 1 0 0 6 2 1 0 0 1 0 0 20 1 2145.3038 Q14676;H0Y6Z8 Q14676 1060 1079 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 4.5992E-05 99.371 By MS/MS By matching 1 1 12498000 7291000 5207500 2408 2098 2731 6253;6254 6147 6147 4143 1 HLDVPDIIITPPTPTGMMLPR EAPVLNDKHLDVPDII PTGMMLPRDLGSTVWL K H L P R D 0 1 0 2 0 0 0 1 1 3 2 0 2 0 5 0 3 0 0 1 0 0 21 0 2313.2225 R4GN89;R4GMY0;Q96GX8 R4GN89 20 40 C16orf74 Uncharacterized protein C16orf74 yes no 3 0.00067119 73.918 By MS/MS By MS/MS 1 1 13025000 7690300 5334800 2409 2657 2732 6255;6256 6148;6149 6148 1057;1058 7791 2 HLEAADKGHSPAQKPK GTEFNKQKHLEAADKG HSPAQKPKTSSGTKPS K H L P K T 3 0 0 1 0 1 1 1 2 0 1 3 0 0 2 1 0 0 0 0 0 0 16 2 1712.8958 Q14966;A0A096LPH6;A0A096LPI0;A0A096LPB4 Q14966 596 611 ZNF638 Zinc finger protein 638 yes no 3 0.012638 69.045 By matching By MS/MS 1 1 27372000 2100700 25271000 2410 2110 2733 6257;6258 6150 6150 4175 1 HLEINPDHPIVETLR MGYMMAKKHLEINPDH HPIVETLRQKAEADKN K H L L R Q 0 1 1 1 0 0 2 0 2 2 2 0 0 0 2 0 1 0 0 1 0 0 15 0 1781.9424 P08238 P08238 625 639 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.0040404 114.31 By MS/MS By MS/MS 1 1 13468000 7446700 6021200 2411 1658 2734 6259;6260 6151;6152 6151 2 HLEINPDHSIIETLR MGYMAAKKHLEINPDH HSIIETLRQKAEADKN K H L L R Q 0 1 1 1 0 0 2 0 2 3 2 0 0 0 1 1 1 0 0 0 0 0 15 0 1785.9373 P07900 P07900 633 647 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 3 0.0070754 99.796 By matching By MS/MS 1 1 13740000 8604000 5135800 2412 1656 2735 6261;6262 6153 6153 1 HLFSSTENLAAGSWKEPAEGGGLSSDR SPKGFRKKHLFSSTEN GGGLSSDRQLSESSTK K H L D R Q 3 1 1 1 0 0 3 4 1 0 3 1 0 1 1 5 1 1 0 0 0 0 27 1 2802.3209 Q6WKZ4;E7EX40 Q6WKZ4 353 379 RAB11FIP1 Rab11 family-interacting protein 1 yes no 3 0.00037788 68.158 By MS/MS By MS/MS 1 1 106150000 48835000 57318000 2413 2346 2736 6263;6264 6154;6155 6155 4756;4757 2 HLLSPVGR TEPGLASRHLLSPVGR HLLSPVGRRQVAGHTR R H L G R R 0 1 0 0 0 0 0 1 1 0 2 0 0 0 1 1 0 0 0 1 0 0 8 0 877.51339 H7BXF4;B1PBA3;Q9NXE4;H7C0W5;H7C1Q6 H7BXF4 760 767 SMPD4 Sphingomyelin phosphodiesterase 4 yes no 2 0.024161 69.275 By MS/MS By matching 1 1 12542000 6937500 5604700 2414 534 2737 6265;6266 6156 6156 1009 1 HLLTDLPLPPELPGGDLSPPDSPEPK KEKEQRTRHLLTDLPL PPDSPEPKAITPPQQP R H L P K A 0 0 0 3 0 0 2 2 1 0 6 1 0 0 8 2 1 0 0 0 0 0 26 0 2730.4116 J3QSD7;Q9NYV4 J3QSD7 663 688 CDK12 Cyclin-dependent kinase 12 yes no 3 7.866E-05 83.36 By MS/MS By MS/MS 1 1 112750000 60111000 52642000 2415 1361 2738 6267;6268 6157;6158 6158 2517;2518 2 HLPSPPLTQEVDLHSIAGPPVPPR PSPHGTRRHLPSPPLT AGPPVPPRQSTSQHIP R H L P R Q 1 1 0 1 0 1 1 1 2 1 3 0 0 0 7 2 1 0 0 2 0 0 24 0 2553.3704 G5E9C8;Q07889 G5E9C8 1257 1280 SOS1 Son of sevenless homolog 1 yes no 3 0.0058663 67.563 By MS/MS 2 8062900 8062900 0 2416 1099 2739 6269;6270 6159;6160 6159 2075 1 HLQQGSESPMMIGELR PANENGDRHLQQGSES PMMIGELRSDLDDVDP R H L L R S 0 1 0 0 0 2 2 2 1 1 2 0 2 0 1 2 0 0 0 0 0 0 16 0 1811.8658 Q9UPU5 Q9UPU5 2597 2612 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.0029218 75.788 By MS/MS By MS/MS 1 1 15888000 7350600 8537900 2417 3069 2740 6271;6272 6161;6162 6161 1216;1217 6491 2 HLSTPSSVSPEPQDSAK LQKARHPKHLSTPSSV PEPQDSAKLRQSGLAN K H L A K L 1 0 0 1 0 1 1 0 1 0 1 1 0 0 3 5 1 0 0 1 0 0 17 0 1765.8483 Q9NZN5;E9PMR6 Q9NZN5 629 645 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2;3 0.0024298 80.69 By MS/MS By MS/MS 2 2 23804000 12666000 11138000 2418 2962 2741 6273;6274;6275;6276 6163;6164;6165;6166;6167 6166 6236 5 HMFDVASGRLMR NGAKFLKRHMFDVASG VASGRLMRTCYTGPGG R H M M R T 1 2 0 1 0 0 0 1 1 0 1 0 2 1 0 1 0 0 0 1 0 0 12 1 1418.6911 A0A0U1RRL8;Q8TB22 A0A0U1RRL8 542 553 SPATA20 Spermatogenesis-associated protein 20 yes no 2 0.030986 46.457 By MS/MS By matching 1 1 11075000 5981100 5094100 2419 397 2742 6277;6278 6168 6168 153;154 1 HNGSLSPGLEAR QCPEPGLRHNGSLSPG LSPGLEARDPLEAREL R H N A R D 1 1 1 0 0 0 1 2 1 0 2 0 0 0 1 2 0 0 0 0 0 0 12 0 1236.6211 Q9C0C2 Q9C0C2 1380 1391 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2;3 0.011121 72.815 By MS/MS By MS/MS 2 3 48343000 29429000 18914000 2420 2791 2743;2744 6279;6280;6281;6282;6283 6169;6170;6171 6169 5818;5819 2 HNLDVVSPIPANK RGVLESVKHNLDVVSP VSPIPANKDLSEADLR K H N N K D 1 0 2 1 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 2 0 0 13 0 1402.7569 A0A0A0MSK6;Q13017 A0A0A0MSK6 759 771 ARHGAP5 Rho GTPase-activating protein 5 yes no 2 0.001063 110.84 By MS/MS By matching 1 1 9189800 5986000 3203800 2421 252 2745 6284;6285 6172 6172 442 1 HNSWSSSSR QSKSFRRRHNSWSSSS NSWSSSSRHPNQATPK R H N S R H 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 5 0 1 0 0 0 0 9 0 1046.453 H3BQ37;H3BPW9;Q96F86 H3BQ37 159 167 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2 0.024422 62.799 By MS/MS By matching 1 1 10424000 9148800 1275400 2422 1240 2746 6286;6287 6173 6173 2316 1 HPASDSEIEELQK SENEDVGKHPASDSEI SEIEELQKSPASDSET K H P Q K S 1 0 0 1 0 1 3 0 1 1 1 1 0 0 1 2 0 0 0 0 0 0 13 0 1481.6998 Q96ST2;B8ZZB6 Q96ST2 154 166 IWS1 Protein IWS1 homolog yes no 2;3 8.4815E-07 127.3 By MS/MS By MS/MS 3 1 72174000 38772000 33402000 2423 2711 2747;2748 6288;6289;6290;6291 6174;6175;6176;6177;6178;6179 6179 5599;5600 6 HPDIYAVPIK ARIEIAQKHPDIYAVP DIYAVPIKTHKPDPGT K H P I K T 1 0 0 1 0 0 0 0 1 2 0 1 0 0 2 0 0 0 1 1 0 0 10 0 1151.6339 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1173 1182 TJP2 Tight junction protein ZO-2 yes no 2 0.0043822 104.06 By MS/MS By MS/MS 1 1 41161000 21866000 19295000 2424 415 2749 6292;6293 6180;6181;6182 6181 8048 3 HPDVEVDGFSELR WKVGHSIRHPDVEVDG VDGFSELRWDDQQKVK R H P L R W 0 1 0 2 0 0 2 1 1 0 1 0 0 1 1 1 0 0 0 2 0 0 13 0 1498.7052 P09874;Q5VX84;Q5VX85 P09874 66 78 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 0.011516 71.933 By MS/MS By matching 1 1 14889000 8573000 6316100 2425 1665 2750 6294;6295 6183 6183 3142 1 HPEPVPEEGSEDELPPQVHKV EDGQSASRHPEPVPEE LPPQVHKV________ R H P K V - 0 0 0 1 0 1 5 1 2 0 1 1 0 0 5 1 0 0 0 3 0 0 21 1 2348.1285 Q7Z3C6;H7C152 Q7Z3C6 819 839 ATG9A Autophagy-related protein 9A yes no 3 9.2904E-18 146.17 By MS/MS By MS/MS 3 1 48752000 28811000 19941000 2426 2376 2751 6296;6297;6298;6299 6184;6185;6186;6187;6188 6188 4824 4 HPGGGDYEEL GGGAPGGRHPGGGDYE GGGDYEEL________ R H P E L - 0 0 0 1 0 0 2 3 1 0 1 0 0 0 1 0 0 0 1 0 0 0 10 0 1072.4462 H0Y4Z8;Q3YEC7 H0Y4Z8 721 730 RABL6 Rab-like protein 6 yes no 2 0.0021607 110.61 By MS/MS By MS/MS 1 1 55255000 32041000 23214000 2427 1124 2752 6300;6301 6189;6190 6190 8150 2 HPLLSSGGPQSPLR SSPVFTFRHPLLSSGG GGPQSPLRGSTGSLKS R H P L R G 0 1 0 0 0 1 0 2 1 0 3 0 0 0 3 3 0 0 0 0 0 0 14 0 1444.7787 Q9P1Y5 Q9P1Y5 358 371 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2;3 0.026118 60.657 By MS/MS By MS/MS 2 2 33244000 19760000 13484000 2428 2968 2753 6302;6303;6304;6305 6191;6192 6191 6252 2 HPNYSPPGSPIEK EKYMRPAKHPNYSPPG PPGSPIEKYQYPLFGL K H P E K Y 0 0 1 0 0 0 1 1 1 1 0 1 0 0 4 2 0 0 1 0 0 0 13 0 1421.6939 E5RFF3;Q9UHF7;H0YAV4 E5RFF3 831 843 TRPS1 Zinc finger transcription factor Trps1 yes no 2 6.3193E-07 129.29 By MS/MS By MS/MS 1 1 19592000 9787800 9804000 2429 776 2754 6306;6307 6193;6194;6195 6195 1391;1392 3 HPPLYQAGLTPPLSPPK DFLKSGKRHPPLYQAG TPPLSPPKSVPPSVPA R H P P K S 1 0 0 0 0 1 0 1 1 0 3 1 0 0 6 1 1 0 1 0 0 0 17 0 1811.9934 Q9ULL5 Q9ULL5 474 490 PRR12 Proline-rich protein 12 yes yes 3 0.0035085 84.581 By MS/MS 1 0 0 0 2430 3045 2755 6308 6196 6196 6417 1 HQASDSENEELPK SESEEPPRHQASDSEN SENEELPKPRISDSES R H Q P K P 1 0 1 1 0 1 3 0 1 0 1 1 0 0 1 2 0 0 0 0 0 0 13 0 1482.6587 Q96ST2;B8ZZB6 Q96ST2 232 244 IWS1 Protein IWS1 homolog yes no 2 0.031324 52.254 By matching By MS/MS 1 1 9122500 3242100 5880400 2431 2711 2756 6309;6310 6197 6197 5601;5602 0 HQASDSENEELPKPR SESEEPPRHQASDSEN NEELPKPRISDSESED R H Q P R I 1 1 1 1 0 1 3 0 1 0 1 1 0 0 2 2 0 0 0 0 0 0 15 1 1735.8125 Q96ST2;B8ZZB6 Q96ST2 232 246 IWS1 Protein IWS1 homolog yes no 2;3 0.0029978 97.291 By MS/MS By MS/MS 2 2 151380000 76820000 74556000 2432 2711 2757 6311;6312;6313;6314 6198;6199;6200 6199 5601;5602 3 HQASDSENEEPPKPR SESEEPPRHQASDSEN NEEPPKPRMSDSESEE R H Q P R M 1 1 1 1 0 1 3 0 1 0 0 1 0 0 3 2 0 0 0 0 0 0 15 1 1719.7812 Q96ST2;B8ZZB6 Q96ST2 193 207 IWS1 Protein IWS1 homolog yes no 3 0.0035059 69.975 By MS/MS By matching 1 1 28632000 18759000 9872700 2433 2711 2758 6315;6316 6201 6201 5603;5604 1 HQGVMVGMGQK PSIVGRPRHQGVMVGM VMVGMGQKDSYVGDEA R H Q Q K D 0 0 0 0 0 2 0 3 1 0 0 1 2 0 0 0 0 0 0 2 0 0 11 0 1170.5638 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;C9JUM1;C9JZR7;C9JTX5;Q562R1;P68133;P68032;A6NL76;P63267;P62736;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 40 50 ACTG1;ACTB;ACTBL2;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle no no 3 0.011702 58.37 By MS/MS 1 2425500 2425500 0 2434 1928;1955 2759 6317 6202 6202 753 1 HQNSLPELEAAEAGAPGSGPVDLFR EFLRKKARHQNSLPEL SGPVDLFRELLEEGKG R H Q F R E 4 1 1 1 0 1 3 3 1 0 3 0 0 1 3 2 0 0 0 1 0 0 25 0 2561.251 Q96BZ8 Q96BZ8 56 80 LENG1 Leukocyte receptor cluster member 1 yes yes 3 7.9331E-06 83.733 By MS/MS By MS/MS 1 1 31451000 13282000 18168000 2435 2629 2760 6318;6319 6203;6204 6204 5406 2 HQQQLLASPGSSTVDNK RLHGQLQRHQQQLLAS GSSTVDNKMLDDLYED R H Q N K M 1 0 1 1 0 3 0 1 1 0 2 1 0 0 1 3 1 0 0 1 0 0 17 0 1808.9017 F2Z2X4;Q9C0E2 F2Z2X4 514 530 XPO4 Exportin-4 yes no 2;3 8.4962E-16 149.95 By MS/MS By MS/MS 2 2 38667000 19777000 18890000 2436 934 2761 6320;6321;6322;6323 6205;6206;6207;6208 6205 1751 4 HQSFGAAVLSR SKAKTPARHQSFGAAV FGAAVLSREAARRDPK R H Q S R E 2 1 0 0 0 1 0 1 1 0 1 0 0 1 0 2 0 0 0 1 0 0 11 0 1171.6098 Q5VV41 Q5VV41 105 115 ARHGEF16 Rho guanine nucleotide exchange factor 16 yes yes 2 0.0056644 79.744 By MS/MS By MS/MS 1 1 11770000 5100600 6669300 2437 2271 2762 6324;6325 6209;6210 6209 4562 2 HQTLEVSLSRDSPLK LRVQGKEKHQTLEVSL LSRDSPLKTLMSHYEE K H Q L K T 0 1 0 1 0 1 1 0 1 0 3 1 0 0 1 3 1 0 0 1 0 0 15 1 1708.9108 Q8NCF5;H3BSZ7 Q8NCF5 358 372 NFATC2IP NFATC2-interacting protein yes no 3 0.0018789 77.137 By MS/MS By matching 1 1 48024000 27310000 20714000 2438 2502 2763 6326;6327 6211 6211 5107 1 HRGSEEDPLLSPVETWK LLKQRKGRHRGSEEDP LSPVETWKGGIDNPAI R H R W K G 0 1 0 1 0 0 3 1 1 0 2 1 0 0 2 2 1 1 0 1 0 0 17 1 1978.9749 A0A0A0MSK6;Q13017;H0YK04 A0A0A0MSK6 1191 1207 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 0.020453 50.873 By MS/MS 1 5529600 0 5529600 2439 252 2764 6328 6212 6212 443 1 HRHSPTGPPGFPR TQRRRRRRHRHSPTGP TGPPGFPRDGDYRDQD R H R P R D 0 2 0 0 0 0 0 2 2 0 0 0 0 1 4 1 1 0 0 0 0 0 13 1 1441.7327 A0A0A0MR66;P98175 A0A0A0MR66 151 163 RBM10 RNA-binding protein 10 yes no 4 0.018862 45.257 By MS/MS By matching 1 1 7089300 4440400 2648900 2440 200 2765 6329;6330 6213 6213 358 1 HRPSEADEEELAR EEEQRRPKHRPSEADE ADEEELARRREARKQE K H R A R R 2 2 0 1 0 0 4 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 13 1 1537.7121 O14617 O14617 655 667 AP3D1 AP-3 complex subunit delta-1 yes yes 3 0.0043002 70.117 By MS/MS By MS/MS 2 1 14823000 9861500 4961600 2441 1451 2766 6331;6332;6333 6214;6215;6216 6216 2675 3 HRPSPPATPPPK SASPPRRRHRPSPPAT PPATPPPKTRHSPTPQ R H R P K T 1 1 0 0 0 0 0 0 1 0 0 1 0 0 6 1 1 0 0 0 0 0 12 1 1280.699 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 394 405 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.0027726 90.853 By MS/MS By MS/MS 2 2 138540000 57404000 81132000 2442 511 2767 6334;6335;6336;6337 6217;6218;6219;6220;6221;6222 6219 941;6972 6 HRVSSQAEDTSSSFDNLFIDR EASEHHPRHRVSSQAE FDNLFIDRLQRITIAD R H R D R L 1 2 1 3 0 1 1 0 1 1 1 0 0 2 0 5 1 0 0 1 0 0 21 1 2410.1149 H8Y6P7;P0CAP2 H8Y6P7 572 592 GCOM1;POLR2M DNA-directed RNA polymerase II subunit GRINL1A yes no 3 0.021473 47.603 By MS/MS 1 4897300 0 4897300 2443 1294 2768 6338 6223 6223 2394;2395 1 HSADGIPPTVLRSPVGLSSDGISSSSSSSR GSSSGGSKHSADGIPP SSSSSSSRKRLHVNDA K H S S R K 1 2 0 2 0 0 0 3 1 2 2 0 0 0 3 11 1 0 0 2 0 0 30 1 2939.4585 O60583 O60583 589 618 CCNT2 Cyclin-T2 yes yes 3 0.016291 44.752 By MS/MS 1 5376500 5376500 0 2444 1523 2769 6339 6224 6224 2874 1 HSDDNGQNHLEGQMNFNADSSQHK LHNDPHARHSDDNGQN NADSSQHKDENTDIAE R H S H K D 1 0 4 3 0 3 1 2 3 0 1 1 1 1 0 3 0 0 0 0 0 0 24 0 2709.1222 C9JDX1;C9K0C8;Q9NS00 C9JDX1 50 73 C1GALT1 Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 yes no 3 0.027057 48.229 By MS/MS 1 0 0 0 2445 657 2770 6340 6225 6225 256 1221;1222 1 HSDLFSSSSPWDK RSAQETVKHSDLFSSS SSSSPWDKGTKPRTKT K H S D K G 0 0 0 2 0 0 0 0 1 0 1 1 0 1 1 5 0 1 0 0 0 0 13 0 1491.663 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6;A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1 F8W7U3 691 703 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 2 0.018398 66.56 By MS/MS 1 2281100 0 2281100 2446 814;183 2771 6341 6226 6226 310;311;312 1 HSEEAEFTPPLKCSPK KKKKKKRKHSEEAEFT PPLKCSPKRKGKSNFL K H S P K R 1 0 0 0 1 0 3 0 1 0 1 2 0 1 3 2 1 0 0 0 0 0 16 1 1855.8774 Q3B726 Q3B726 315 330 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 3 0.00083211 82.529 By MS/MS By MS/MS 1 1 11982000 5473700 6508200 2447 2186 2772 6342;6343 6227;6228 6228 4346 2 HSGGFLSSPADFSQENK TFSNVFGRHSGGFLSS ADFSQENKAPFEAVKR R H S N K A 1 0 1 1 0 1 1 2 1 0 1 1 0 2 1 4 0 0 0 0 0 0 17 0 1806.8173 Q7LBC6 Q7LBC6 772 788 KDM3B Lysine-specific demethylase 3B yes yes 2 0.0076471 70.47 By MS/MS 1 8233300 8233300 0 2448 2369 2773 6344 6229 6229 4801 1 HSGLSSGSTQER LLSQAHSRHSGLSSGS SSGSTQERMKAQLNPH R H S E R M 0 1 0 0 0 1 1 2 1 0 1 0 0 0 0 4 1 0 0 0 0 0 12 0 1244.5745 Q9Y6S9 Q9Y6S9 237 248 RPS6KL1 Ribosomal protein S6 kinase-like 1 yes yes 1 0.01445 56.258 By matching By MS/MS 1 1 34029000 17549000 16480000 2449 3153 2774 6345;6346 6230 6230 6744;6745;6746 1 HSLDSDEEEDDDDGGSSK PGSRFKGKHSLDSDEE DDDGGSSKYDILASED K H S S K Y 0 0 0 6 0 0 3 2 1 0 1 1 0 0 0 4 0 0 0 0 0 0 18 0 1935.709 O95400 O95400 45 62 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 2 6.0875E-26 149.74 By MS/MS By MS/MS 1 1 0 0 0 2450 1594 2775 6347;6348 6231;6232 6231 3021 2 HSLEEGLDMVNR NSTTIMSRHSLEEGLD EGLDMVNRETAHEREM R H S N R E 0 1 1 1 0 0 2 1 1 0 2 0 1 0 0 1 0 0 0 1 0 0 12 0 1398.6562 Q7Z309 Q7Z309 57 68 FAM122B Protein FAM122B yes yes 2 0.00024842 101.32 By MS/MS By MS/MS 1 1 25285000 9735000 15550000 2451 2374 2776 6349;6350 6233;6234 6234 957 4818 2 HSLSGSSPGMK DGSGTPSRHSLSGSSP SGSSPGMKDIPRTPSR R H S M K D 0 0 0 0 0 0 0 2 1 0 1 1 1 0 1 4 0 0 0 0 0 0 11 0 1086.5128 Q9UQ35 Q9UQ35 1457 1467 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0013083 83.226 By MS/MS By MS/MS 1 2 51229000 11331000 39898000 2452 3074 2777 6351;6352;6353 6235;6236;6237;6238;6239 6237 1224 6510;6511;6512;6513 5 HSLSLDDIR KPKTSTDRHSLSLDDI SLSLDDIRLYQKDFLR R H S I R L 0 1 0 2 0 0 0 0 1 1 2 0 0 0 0 2 0 0 0 0 0 0 9 0 1054.5407 G3V4T7;Q96NE9 G3V4T7 464 472 FRMD6 FERM domain-containing protein 6 yes no 2 0.011932 75.566 By MS/MS 1 7777700 7777700 0 2453 1083 2778 6354 6240 6240 2039 1 HSMGPGGYGDNLGGGQMYSPR ASQVESLRHSMGPGGY GGQMYSPREMRANGSW R H S P R E 0 1 1 1 0 1 0 7 1 0 1 0 2 0 2 2 0 0 2 0 0 0 21 0 2136.9106 P40425 P40425 377 397 PBX2 Pre-B-cell leukemia transcription factor 2 yes yes 3 0.015597 50.884 By MS/MS By matching 1 1 18956000 15356000 3600000 2454 1812 2779 6355;6356 6241 6241 685 8261 1 HSPAPPPDPGFPAPSPPPADSPSEGFSLK LSPILPGRHSPAPPPD PSEGFSLKAGGTALLP R H S L K A 3 0 0 2 0 0 1 2 1 0 1 1 0 2 11 5 0 0 0 0 0 0 29 0 2879.3766 M0QZS0;Q6ZSZ5;A0A087WZG4 M0QZS0 749 777 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes no 3 0.0008649 59.359 By MS/MS By MS/MS 1 1 13506000 7866000 5639700 2455 1416 2780 6357;6358 6242;6243 6242 2596 2 HSPIAPSSPSPQVLAQK RTDSQSVRHSPIAPSS SPQVLAQKYSLVAKQE R H S Q K Y 2 0 0 0 0 2 0 0 1 1 1 1 0 0 4 4 0 0 0 1 0 0 17 0 1742.9315 Q9NQS7 Q9NQS7 305 321 INCENP Inner centromere protein yes yes 2;3 7.1706E-05 122.75 By MS/MS By MS/MS 2 2 49322000 32322000 17001000 2456 2898 2781 6359;6360;6361;6362 6244;6245;6246;6247 6246 6101;6102;6103;6104 4 HSQFIGYPITLFVEK RIKEIVKKHSQFIGYP PITLFVEKERDKEVSD K H S E K E 0 0 0 0 0 1 1 1 1 2 1 1 0 2 1 1 1 0 1 1 0 0 15 0 1777.9403 P07900;G3V2J8;Q58FG0 P07900 210 224 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 3 0.012152 66.738 By MS/MS 1 0 0 0 2457 1656 2782 6363 6248 6248 1 HSQPSPEPHSPTEPPAWGSSIVK DASAIVAKHSQPSPEP AWGSSIVKVPSGIFDV K H S V K V 1 0 0 0 0 1 2 1 2 1 0 1 0 0 6 5 1 1 0 1 0 0 23 0 2451.1819 R4GNB2;R4GN35;Q5VZ89 R4GNB2 964 986 DENND4C DENN domain-containing protein 4C yes no 3 0.029716 44.529 By MS/MS By matching 1 1 14517000 8054800 6461900 2458 2281 2783 6364;6365 6249 6249 0 HSQQLFPDGSPGDQWVK KLSRTKFRHSQQLFPD SPGDQWVKHRQPLQQK R H S V K H 0 0 0 2 0 3 0 2 1 0 1 1 0 1 2 2 0 1 0 1 0 0 17 0 1924.9068 H0Y9T5;Q8IU60 H0Y9T5 257 273 DCP2 m7GpppN-mRNA hydrolase yes no 3 0.0084378 72.145 By MS/MS 1 0 0 0 2459 1153 2784 6366 6250 6250 2187 1 HSRSPFEDSR NVSASKKRHSRSPFED RSPFEDSRGYMMMFPR R H S S R G 0 2 0 1 0 0 1 0 1 0 0 0 0 1 1 3 0 0 0 0 0 0 10 1 1216.5585 O14654 O14654 732 741 IRS4 Insulin receptor substrate 4 yes yes 3 0.0039357 72.731 By matching By MS/MS 1 1 12901000 6154700 6746000 2460 1453 2785 6367;6368 6251 6251 2684 1 HSSDINHLVTQGRESPEGSYTDDANQEVR TGGRGDRRHSSDINHL DDANQEVRGPPQQHGH R H S V R G 1 2 2 3 0 2 3 2 2 1 1 0 0 0 1 4 2 0 1 2 0 0 29 1 3240.4668 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 333 361 FNBP1L Formin-binding protein 1-like yes no 4 3.2342E-05 74.525 By MS/MS By MS/MS 1 1 40477000 19330000 21147000 2461 12 2786 6369;6370 6252;6253 6252 22;23;24;6836 2 HSSGSLTPPVTPPITPSSSFR GNVSTPPRHSSGSLTP ITPSSSFRSSTPTGSE R H S F R S 0 1 0 0 0 0 0 1 1 1 1 0 0 1 5 6 3 0 0 1 0 0 21 0 2151.096 C9JWY1;C9JGY8;H0Y403;Q86VZ6 C9JWY1 70 90 JAZF1 Juxtaposed with another zinc finger protein 1 yes no 3 0.0050158 68.657 By MS/MS 1 0 0 0 2462 664 2787 6371 6254 6254 7030;7031;7032 1 HSSISPSTLTLK RLSRSRSRHSSISPST SPSTLTLKSSLAAELN R H S L K S 0 0 0 0 0 0 0 0 1 1 2 1 0 0 1 4 2 0 0 0 0 0 12 0 1269.6929 Q14004 Q14004 435 446 CDK13 Cyclin-dependent kinase 13 yes yes 2 8.9679E-05 120.9 By MS/MS By MS/MS 1 1 33202000 18096000 15106000 2463 2080 2788 6372;6373 6255;6256;6257 6256 4100;4101;4102 3 HSSISPVRLPLNSSLGAELSR KRSSSRSRHSSISPVR SLGAELSRKKKERAAA R H S S R K 1 2 1 0 0 0 1 1 1 1 4 0 0 0 2 6 0 0 0 1 0 0 21 1 2219.2022 J3QSD7;Q9NYV4 J3QSD7 380 400 CDK12 Cyclin-dependent kinase 12 yes no 3 0.019026 47.796 By MS/MS By MS/MS 2 2 221220000 113740000 107480000 2464 1361 2789;2790 6374;6375;6376;6377 6258;6259;6260 6259 2519;2520 3 HSSNPPLESHVGWVMDSR MPRKRKTRHSSNPPLE VGWVMDSREHRPRTAS R H S S R E 0 1 1 1 0 0 1 1 2 0 1 0 1 0 2 4 0 1 0 2 0 0 18 0 2033.9378 Q6PKG0;H0YC33;H0YBR8 Q6PKG0 822 839 LARP1 La-related protein 1 yes no 3 4.9216E-05 98.552 By MS/MS By MS/MS 2 2 59410000 29620000 29789000 2465 2330 2791;2792 6378;6379;6380;6381 6261;6262;6263 6262 936 4696 3 HSSYPAGTEDDEGMGEEPSPFR GAVEIRSRHSSYPAGT GEEPSPFRGRSRSAPP R H S F R G 1 1 0 2 0 0 4 3 1 0 0 0 1 1 3 3 1 0 1 0 0 0 22 0 2393.9706 Q92934 Q92934 73 94 BAD Bcl2-associated agonist of cell death yes yes 3 9.6624E-05 86.084 By MS/MS By MS/MS 1 1 38500000 21066000 17433000 2466 2612 2793 6382;6383 6264;6265 6265 1045 5365 2 HSTPSNSSNPSGPPSPNSPHR EPDSDSTKHSTPSNSS PSPNSPHRSQLPLEGL K H S H R S 0 1 3 0 0 0 0 1 2 0 0 0 0 0 6 7 1 0 0 0 0 0 21 0 2139.9682 Q9Y5S2 Q9Y5S2 1676 1696 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 3 0.0017517 64.246 By MS/MS By matching 1 1 5170000 2600600 2569300 2467 3133 2794 6384;6385 6266 6266 6711 1 HSTSGTDEGEDGDEPDDGSNDVVDLLPR APTRGISKHSTSGTDE DVVDLLPRTEISDKIT K H S P R T 0 1 1 7 0 0 3 4 1 0 2 0 0 0 2 3 2 0 0 2 0 0 28 0 2927.2177 Q14008 Q14008 827 854 CKAP5 Cytoskeleton-associated protein 5 yes yes 3 0.0020138 68.074 By MS/MS By MS/MS 1 2 20198000 11050000 9148200 2468 2081 2795 6386;6387;6388 6267;6268;6269;6270 6269 4107;7569;7570 4 HSVTAATPPPSPTSGESGDLLSNLLQSPSSAK ILETVWDKHSVTAATP LQSPSSAKLLNQPIPI K H S A K L 3 0 1 1 0 1 1 2 1 0 4 1 0 0 5 8 3 0 0 1 0 0 32 0 3132.5575 Q96QU8 Q96QU8 198 229 XPO6 Exportin-6 yes yes 3 2.1908E-08 83.022 By matching By MS/MS 1 2 83159000 33080000 50080000 2469 2703 2796;2797 6389;6390;6391 6271;6272;6273;6274 6271 5575;5576;7806 4 HTDDEMTGYVATR ILDFGLARHTDDEMTG MTGYVATRWYRAPEIM R H T T R W 1 1 0 2 0 0 1 1 1 0 0 0 1 0 0 0 3 0 1 1 0 0 13 0 1494.6409 E7EX54;B4E0K5;Q16539 E7EX54 97 109 MAPK14 Mitogen-activated protein kinase 14 yes no 2;3 0.00076007 88.596 By MS/MS By MS/MS 2 2 76512000 39247000 37265000 2470 570 2798 6392;6393;6394;6395 6275;6276;6277 6277 228 6995;8077 3 HTGPNSPDTANDGFVR VEMDWVLKHTGPNSPD TANDGFVRLRGLPFGC K H T V R L 1 1 2 2 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 16 0 1683.7601 E5RGV0;D6RIU0;D6RBM0;E9PCY7;G8JLB6;P31943;E5RGH4;E7EQJ0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;P55795;H0YAQ2 E5RGV0 47 62 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 yes no 2;3 5.3221E-16 144.74 By MS/MS By MS/MS 3 3 1087100000 621040000 466030000 2471 753 2799 6396;6397;6398;6399;6400;6401 6278;6279;6280;6281;6282 6282 1363;7054 5 HTLGDSDNES LAEYLFDKHTLGDSDN LGDSDNES________ K H T E S - 0 0 1 2 0 0 1 1 1 0 1 0 0 0 0 2 1 0 0 0 0 0 10 0 1073.4261 G3V1D1;G3V192;P02794 G3V1D1 104 113 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes no 2 0.023561 61.815 By MS/MS 1 5625400 0 5625400 2472 1060 2800 6402 6283 6283 2005;2006 1 HTPFYALPSSLERTPTK PASTEAERHTPFYALP SLERTPTKMTTSQKVT R H T T K M 1 1 0 0 0 0 1 0 1 0 2 1 0 1 3 2 3 0 1 0 0 0 17 1 1944.0105 Q9ULM3 Q9ULM3 394 410 YEATS2 YEATS domain-containing protein 2 yes yes 3 8.828E-05 98.804 By MS/MS By MS/MS 1 1 13698000 7214300 6483800 2473 3046 2801 6403;6404 6284;6285 6284 6424;6425 2 HTSCSSAGNDSKPVQEAPSVAR GIPVPKPRHTSCSSAG QEAPSVARISSIPHDL R H T A R I 3 1 1 1 1 1 1 1 1 0 0 1 0 0 2 5 1 0 0 2 0 0 22 1 2284.0502 H0Y860;Q9P246 H0Y860 703 724 STIM2 Stromal interaction molecule 2 yes no 3 0.0066836 55.662 By MS/MS By matching 1 1 12966000 6322100 6643500 2474 1144 2802 6405;6406 6286 6286 2173 1 HTSVQTTSSGSGPFTDVR RGEWKCERHTSVQTTS SGPFTDVRAAVYQPQP R H T V R A 0 1 0 1 0 1 0 2 1 0 0 0 0 1 1 4 4 0 0 2 0 0 18 0 1862.8759 P02751 P02751 273 290 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 0.011273 69.747 By MS/MS 1 0 0 0 2475 1631 2803 6407 6287 6287 3079;3080;3081;3082 1 HTTFEQPVFSVSKQSPPISTSK RKVNTEQKHTTFEQPV SPPISTSKWFDPKSIC K H T S K W 0 0 0 0 0 2 1 0 1 1 0 2 0 2 3 5 3 0 0 2 0 0 22 1 2431.2383 P33981 P33981 422 443 TTK Dual specificity protein kinase TTK yes yes 3 0.00030947 78.057 By MS/MS By MS/MS 1 1 30394000 16202000 14193000 2476 1789 2804 6408;6409 6288;6289;6290 6290 3374 3 HVEVSQAPLPPAPAYLSSPLALPSQR RIEDMRKRHVEVSQAP PLALPSQRRSPPEEPP R H V Q R R 4 1 0 0 0 2 1 0 1 0 4 0 0 0 6 4 0 0 1 2 0 0 26 0 2724.4599 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9 A0A087X0G7 352 377 IKBKG NF-kappa-B essential modulator yes no 3 0.002635 56.416 By matching By MS/MS 1 1 10072000 4890100 5181700 2477 64 2805 6410;6411 6291 6291 114 1 HVFGESDELIGQK VLGHSERRHVFGESDE SDELIGQKVAHALAEG R H V Q K V 0 0 0 1 0 1 2 2 1 1 1 1 0 1 0 1 0 0 0 1 0 0 13 0 1457.7151 P60174;U3KQF3;U3KPZ0;U3KPS5 P60174 138 150 TPI1 Triosephosphate isomerase yes no 2;3 9.4762E-10 144.1 By matching By MS/MS 2 2 18521000 10099000 8422200 2478 1926 2806 6412;6413;6414;6415 6292;6293 6292 2 HVLQFCRDSGPVHR GRVGSVCRHVLQFCRD RDSGPVHRAFSRIARV R H V H R A 0 2 0 1 1 1 0 1 2 0 1 0 0 1 1 1 0 0 0 2 0 0 14 1 1706.8423 C9J069 C9J069 721 734 C9orf172 Uncharacterized protein C9orf172 yes yes 3 0.023155 53.168 By MS/MS 1 1611400 0 1611400 2479 621 2807 6416 6294 6294 1145 0 HVLSDLEDDEVR QVEGVTRRHVLSDLED DLEDDEVRDLGSTGTS R H V V R D 0 1 0 3 0 0 2 0 1 0 2 0 0 0 0 1 0 0 0 2 0 0 12 0 1425.6736 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6 H0YDJ4 633 644 NIN Ninein yes no 2 0.00056075 109.6 By MS/MS By MS/MS 1 1 25412000 11120000 14292000 2480 620 2808 6417;6418 6295;6296 6296 1143 2 HVTLPSSPR LRPRNKRRHVTLPSSP VTLPSSPRSNTPMGDK R H V P R S 0 1 0 0 0 0 0 0 1 0 1 0 0 0 2 2 1 0 0 1 0 0 9 0 992.54033 Q5T4S7;A0A0A0MSW0;X6RE05 Q5T4S7 2713 2721 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 2 0.013241 73.841 By MS/MS By MS/MS 1 2 54671000 28996000 25675000 2481 2240 2809 6419;6420;6421 6297;6298 6298 4490;4491 2 HWVAPGGPYSAETPGVPSPIAALK TTEEQQQRHWVAPGGP PSPIAALKNVAEALGH R H W L K N 4 0 0 0 0 0 1 3 1 1 1 1 0 0 5 2 1 1 1 2 0 0 24 0 2401.243 Q8IU81 Q8IU81 404 427 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2;3 1.7197E-06 99.836 By MS/MS By MS/MS 1 2 49421000 28082000 21339000 2482 2424 2810 6422;6423;6424 6299;6300;6301 6300 4957 3 HYEDGYPGGSDNYGSLSR YPPDGYSRHYEDGYPG DNYGSLSRVTRIEERY R H Y S R V 0 1 1 2 0 0 1 4 1 0 1 0 0 0 1 3 0 0 3 0 0 0 18 0 1972.8187 C9JZR2;O60716;E9PRE2 C9JZR2 216 233 CTNND1 Catenin delta-1 yes no 2;3 1.215E-92 213.71 By MS/MS By MS/MS 2 3 240350000 114000000 126350000 2483 706 2811 6425;6426;6427;6428;6429 6302;6303;6304;6305;6306 6303 1304;8102;8103 5 HYGITSPISLAAPK QQTQPPQKHYGITSPI PISLAAPKETDCVLTQ K H Y P K E 2 0 0 0 0 0 0 1 1 2 1 1 0 0 2 2 1 0 1 0 0 0 14 0 1453.7929 G3XAH6;P51003;G3V457;G3V3I9;A0A0C4DGK1 G3XAH6 19 32 PAPOLA Poly(A) polymerase alpha yes no 2 4.3254E-07 131.08 By MS/MS By MS/MS 1 1 43764000 26701000 17063000 2484 1090 2812 6430;6431 6307;6308 6307 2051;7175 2 IAAAILNTPDLR NPPLNGARIAAAILNT ILNTPDLRKQWLQEVK R I A L R K 3 1 1 1 0 0 0 0 0 2 2 0 0 0 1 0 1 0 0 0 0 0 12 0 1266.7296 P00505 P00505 326 337 GOT2 Aspartate aminotransferase, mitochondrial yes yes 2 4.5256E-09 138.66 By MS/MS By MS/MS 1 1 9503500 6262900 3240700 2485 1624 2813 6432;6433 6309;6310 6309 2 IAAPELHKGDSDSEEDEPTK KKRKEPVKIAAPELHK SEEDEPTKKKTILQGS K I A T K K 2 0 0 3 0 0 4 1 1 1 1 2 0 0 2 2 1 0 0 0 0 0 20 1 2166.9917 Q92733 Q92733 147 166 PRCC Proline-rich protein PRCC yes yes 3 0.028091 44.788 By matching By MS/MS 1 1 380380000 191990000 188400000 2486 2597 2814 6434;6435 6311 6311 5333;5334 1 IAASSSFR FPCTTAPKIAASSSFR IAASSSFRSSDKPIRT K I A F R S 2 1 0 0 0 0 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 8 0 837.43447 Q99961 Q99961 283 290 SH3GL1 Endophilin-A2 yes yes 2 0.0047277 112.11 By MS/MS By MS/MS 1 1 293300000 164700000 128600000 2487 2737 2815 6436;6437 6312;6313;6314;6315 6315 5677;5678 4 IACKSPPPESMDTPTSTR TTDDKTTKIACKSPPP MDTPTSTRRRPKTPLG K I A T R R 1 1 0 1 1 0 1 0 0 1 0 1 1 0 4 3 3 0 0 0 0 0 18 1 1973.9187 P46013 P46013 2101 2118 MKI67 Antigen KI-67 yes yes 3 0.021058 54.237 By matching By MS/MS 1 1 18435000 10384000 8051100 2488 1833 2816 6438;6439 6316 6316 697 3463 1 IACKSPPPESVDTPTSTK MTDEKTTKIACKSPPP VDTPTSTKQWPKRSLR K I A T K Q 1 0 0 1 1 0 1 0 0 1 0 2 0 0 4 3 3 0 0 1 0 0 18 1 1913.9404 P46013 P46013 1127 1144 MKI67 Antigen KI-67 yes yes 3 1.0978E-10 140.47 By MS/MS By MS/MS 1 1 30454000 17157000 13297000 2489 1833 2817 6440;6441 6317;6318 6317 3464 1 IADLQSPLFR EFHHVFRRIADLQSPL DLQSPLFRGPDDDPAA R I A F R G 1 1 0 1 0 1 0 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 10 0 1158.6397 Q9NZJ4 Q9NZJ4 1774 1783 SACS Sacsin yes yes 2 1.3972E-07 161.19 By MS/MS By MS/MS 1 1 13314000 7501800 5811900 2490 2960 2818 6442;6443 6319;6320 6319 6233 2 IADPEHDHTGFLTEYVATR ICDFGLARIADPEHDH LTEYVATRWYRAPEIM R I A T R W 2 1 0 2 0 0 2 1 2 1 1 0 0 1 1 0 3 0 1 1 0 0 19 0 2171.0283 B3KR49;E9PJF0;E9PQW4;P27361 B3KR49 76 94 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 3;4 8.1051E-22 156 By MS/MS By MS/MS 3 3 952580000 477940000 474640000 2491 538 2819;2820 6444;6445;6446;6447;6448;6449 6321;6322;6323;6324;6325;6326;6327;6328 6324 6988;8068 8 IAISPLKSPNK STTQTPNKIAISPLKS SPLKSPNKAVKSTVQT K I A N K A 1 0 1 0 0 0 0 0 0 2 1 2 0 0 2 2 0 0 0 0 0 0 11 1 1166.7023 Q6MZP7 Q6MZP7 307 317 LIN54 Protein lin-54 homolog yes yes 2 0.003955 91.093 By MS/MS By MS/MS 2 2 27421000 13504000 13917000 2492 2308 2821 6450;6451;6452;6453 6329;6330;6331 6329 4656;4657 3 IAIYELLFK MLMPKKNRIAIYELLF AIYELLFKEGVMVAKK R I A F K E 1 0 0 0 0 0 1 0 0 2 2 1 0 1 0 0 0 0 1 0 0 0 9 0 1108.6532 P46783;F6U211;S4R435 P46783 9 17 RPS10;RPS10-NUDT3 40S ribosomal protein S10 yes no 2 0.0018998 119.41 By MS/MS 1 1600200 0 1600200 2493 1839 2822 6454 6332 6332 1 IALTDNALIAR YGKINKKRIALTDNAL TDNALIARSLGKYGII R I A A R S 3 1 1 1 0 0 0 0 0 2 2 0 0 0 0 0 1 0 0 0 0 0 11 0 1169.6768 A8MUD9;P18124 A8MUD9 127 137 RPL7 60S ribosomal protein L7 yes no 2 0.0085665 83.948 By MS/MS By MS/MS 1 1 12334000 6379600 5954900 2494 497 2823 6455;6456 6333;6334 6334 2 IAQLEEELEEEQSNMELLNDR EKRRLEARIAQLEEEL NMELLNDRFRKTTLQV R I A D R F 1 1 2 1 0 2 7 0 0 1 4 0 1 0 0 1 0 0 0 0 0 0 21 0 2531.1697 P35580 P35580 1738 1758 MYH10 Myosin-10 yes yes 3 0.0027505 62.167 By MS/MS 1 4304400 0 4304400 2495 1796 2824 6457 6335 6335 679 1 IAQVSPGPR GRSASKLRIAQVSPGP AQVSPGPRDSPAFPDS R I A P R D 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 1 0 0 0 1 0 0 9 0 923.51886 Q9NQS7 Q9NQS7 259 267 INCENP Inner centromere protein yes yes 2 0.0032916 109.16 By MS/MS By MS/MS 1 1 288580000 165310000 123270000 2496 2898 2825 6458;6459 6336;6337 6337 6105 2 IAQVSPGPRDSPAFPDSPWR GRSASKLRIAQVSPGP AFPDSPWRERVLAPIL R I A W R E 2 2 0 2 0 1 0 1 0 1 0 0 0 1 5 3 0 1 0 1 0 0 20 1 2179.0811 Q9NQS7 Q9NQS7 259 278 INCENP Inner centromere protein yes yes 3 0.0051776 59.003 By MS/MS By MS/MS 2 1 15173000 10379000 4794800 2497 2898 2826;2827 6460;6461;6462 6338;6339 6338 6099;6100;6105 2 IASDEEIQGTKDAVIQDLER KKASRTARIASDEEIQ AVIQDLERKLRFKEDL R I A E R K 2 1 0 3 0 2 3 1 0 3 1 1 0 0 0 1 1 0 0 1 0 0 20 1 2229.1125 Q8WX93 Q8WX93 891 910 PALLD Palladin yes yes 3 0.00587 58.848 By matching By MS/MS 1 1 10048000 6052300 3995200 2498 2566 2828 6463;6464 6340 6340 5257 1 IASLEVENQSLR DHGELVVRIASLEVEN EVENQSLRGVVQELQQ R I A L R G 1 1 1 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 12 0 1357.7201 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PPR1;E9PL12;E9PN91;E9PMW7;H0YCK7;E9PIZ1 E9PL71 60 71 EEF1D Elongation factor 1-delta yes no 2 0.0018401 99.53 By MS/MS By MS/MS 1 1 10260000 4934400 5325300 2499 172 2829 6465;6466 6341;6342 6342 2 IATGSFLK PIEWVCRRIATGSFLK IATGSFLKRNPGVKEG R I A L K R 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 1 1 0 0 0 0 0 8 0 835.48035 E9PBS1;P22234;D6RF62 E9PBS1 103 110 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 0.0055238 124.92 By MS/MS By MS/MS 1 1 8227900 3866600 4361300 2500 845 2830 6467;6468 6343;6344 6343 1575 2 IAVAAQNCYK ARQKLDPKIAVAAQNC VAAQNCYKVTNGAFTG K I A Y K V 3 0 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 10 0 1136.5648 P60174 P60174 97 106 TPI1 Triosephosphate isomerase yes yes 2 0.023197 74.127 By matching By MS/MS 1 1 13233000 6464000 6769500 2501 1926 2831 6469;6470 6345 6345 1 ICDDELILIK AEEVVQERICDDELIL DDELILIKNTKARTSA R I C I K N 0 0 0 2 1 0 1 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1230.653 F5H282;E7EQR6;P17987;E7ERF2;F5GZ03 F5H282 132 141 TCP1 T-complex protein 1 subunit alpha no no 2 0.0048543 102.62 By MS/MS 1 1631000 0 1631000 2502 809;951 2832 6471 6346 6346 1 ICSIYTQSGENSLVQEGSEASPIGK EEQEKLLRICSIYTQS SEASPIGKSPYTLDSL R I C G K S 1 0 1 0 1 2 3 3 0 3 1 1 0 0 1 5 1 0 1 1 0 0 25 0 2653.2541 Q9Y4W2 Q9Y4W2 503 527 LAS1L Ribosomal biogenesis protein LAS1L yes yes 3 0.00010412 76.762 By MS/MS By MS/MS 1 1 24084000 12504000 11580000 2503 3123 2833 6472;6473 6347;6348 6347 6692 2 ICTEQSNSPPPIR HKFYKQNKICTEQSNS SNSPPPIRRQPTWSRS K I C I R R 0 1 1 0 1 1 1 0 0 2 0 0 0 0 3 2 1 0 0 0 0 0 13 0 1497.7246 Q15678 Q15678 307 319 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 2.402E-34 167.03 By MS/MS 1 0 0 0 2504 2150 2834 6474 6349 6349 4269 1 ICTLPSPPSPLASLAPVADSSTR VHEKNGKKICTLPSPP PVADSSTRVDSPSHGL K I C T R V 3 1 0 1 1 0 0 0 0 1 3 0 0 0 5 5 2 0 0 1 0 0 23 0 2336.2046 Q9UER7 Q9UER7 663 685 DAXX Death domain-associated protein 6 yes yes 2;3 3.5946E-05 108.96 By matching By MS/MS 1 2 49707000 24318000 25389000 2505 2997 2835 6475;6476;6477 6350;6351 6351 6299;6300 2 IDASKNEEDEGHSNSSPR SAESEGAKIDASKNEE GHSNSSPRHSEAATAQ K I D P R H 1 1 2 2 0 0 3 1 1 1 0 1 0 0 1 4 0 0 0 0 0 0 18 1 1970.8566 D6RAF8;Q14103;D6RD83 D6RAF8 68 85 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2;3 0.00014293 110.34 By MS/MS By MS/MS 4 5 714910000 279410000 435500000 2506 741 2836;2837;2838 6478;6479;6480;6481;6482;6483;6484;6485;6486 6352;6353;6354;6355;6356;6357;6358;6359;6360 6354 27 1340;1341;1342 9 IDEDGENTQIEDTEPMSPVLNSK MESLSSHRIDEDGENT MSPVLNSKFVPAENDS R I D S K F 0 0 2 3 0 1 4 1 0 2 1 1 1 0 2 2 2 0 0 1 0 0 23 0 2560.1487 Q12888;A6NNK5;C9JXV0 Q12888 536 558 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2;3 2.6343E-90 203.58 By MS/MS By MS/MS 4 5 346050000 111780000 234270000 2507 2031 2839;2840;2841 6487;6488;6489;6490;6491;6492;6493;6494;6495 6361;6362;6363;6364;6365;6366;6367;6368;6369 6363 803 3953 9 IDELRQLELMSSSKSQEESR FARRALAKIDELRQLE SKSQEESRRYFREATM K I D S R R 0 2 0 1 0 2 4 0 0 1 3 1 1 0 0 5 0 0 0 0 0 0 20 2 2364.1591 A0A0A0MTQ3;Q96N23 A0A0A0MTQ3 276 295 CFAP54 Cilia- and flagella-associated protein 54 yes no 3 0.0034898 60.517 By MS/MS 1 56504000 0 56504000 2508 278 2842 6496 6370 6370 493;494;495;496 1 IDENSDKEMEVEESPEK IGAENSEKIDENSDKE EVEESPEKIKVQTTPK K I D E K I 0 0 1 2 0 0 6 0 0 1 0 2 1 0 1 2 0 0 0 1 0 0 17 1 2006.8626 Q8N3X1 Q8N3X1 495 511 FNBP4 Formin-binding protein 4 yes yes 2 0.0087799 67.785 By MS/MS By matching 1 1 22014000 10341000 11673000 2509 2469 2843 6497;6498 6371 6371 1003 5047;5048 1 IDENSDKEMEVEESPEKIK IGAENSEKIDENSDKE EESPEKIKVQTTPKVE K I D I K V 0 0 1 2 0 0 6 0 0 2 0 3 1 0 1 2 0 0 0 1 0 0 19 2 2248.0417 Q8N3X1 Q8N3X1 495 513 FNBP4 Formin-binding protein 4 yes yes 3 0.017752 59.046 By matching By MS/MS 1 1 45532000 23959000 21572000 2510 2469 2844 6499;6500 6372 6372 1003 5047;5048 1 IDEPLEGSEDR HESGASIKIDEPLEGS PLEGSEDRIITITGTQ K I D D R I 0 1 0 2 0 0 3 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 11 0 1258.5677 P61978;S4R359 P61978 423 433 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0045567 91.265 By MS/MS By matching 1 1 114210000 61626000 52586000 2511 1931 2845 6501;6502 6373 6373 1 IDFIPVSPAPSPTR EKSASPKRIDFIPVSP SPAPSPTRGIGKQCFS R I D T R G 1 1 0 1 0 0 0 0 0 2 0 0 0 1 4 2 1 0 0 1 0 0 14 0 1495.8035 Q96E09 Q96E09 137 150 FAM122A Protein FAM122A yes yes 2 0.00069252 94.01 By MS/MS By MS/MS 1 1 23145000 13659000 9485900 2512 2640 2846 6503;6504 6374;6375 6375 5438;5439;7782 2 IDFSSIAVPGTSSPR VQFPNLPRIDFSSIAV VPGTSSPRQRQPPGTQ R I D P R Q 1 1 0 1 0 0 0 1 0 2 0 0 0 1 2 4 1 0 0 1 0 0 15 0 1532.7835 Q5TDH0 Q5TDH0 94 108 DDI2 Protein DDI1 homolog 2 yes yes 2 0.029635 62.237 By MS/MS 1 93111000 93111000 0 2513 2256 2847 6505 6376 6376 0 IDFTPVSPAPSPTR EKLYSPKRIDFTPVSP SPAPSPTRGFGKMFVS R I D T R G 1 1 0 1 0 0 0 0 0 1 0 0 0 1 4 2 2 0 0 1 0 0 14 0 1483.7671 Q7Z309;G1UD79 Q7Z309 109 122 FAM122B;SPACIA2 Protein FAM122B yes no 2 0.00089901 109.04 By MS/MS By MS/MS 1 1 30831000 15053000 15778000 2514 2374 2848 6506;6507 6377;6378 6377 4819;4820;7687 2 IDGATQSSPAEPK GVAKDNAKIDGATQSS QSSPAEPKSEDADRCT K I D P K S 2 0 0 1 0 1 1 1 0 1 0 1 0 0 2 2 1 0 0 0 0 0 13 0 1299.6307 Q32MZ4 Q32MZ4 707 719 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 2 1.8189E-35 188.09 By MS/MS By MS/MS 1 1 60696000 33122000 27574000 2515 2185 2849 6508;6509 6379;6380;6381 6379 4345 3 IDINMSGFNETDDLKR GQKEGEPRIDINMSGF NETDDLKRAESMLQQA R I D K R A 0 1 2 3 0 0 1 1 0 2 1 1 1 1 0 1 1 0 0 0 0 0 16 1 1866.8782 A0A0A0MSQ0;P13797;H7C4N2 A0A0A0MSQ0 308 323 PLS3 Plastin-3 yes no 3 0.0029643 65.374 By matching By MS/MS 1 1 4795900 2342300 2453600 2516 255 2850 6510;6511 6382 6382 104 1 IDISPSTFR KSPEIHRRIDISPSTF DISPSTFRKHGLAHDE R I D F R K 0 1 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 9 0 1034.5397 Q9Y2W1 Q9Y2W1 679 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0014684 113.67 By MS/MS By MS/MS 1 1 534410000 285430000 248990000 2517 3096 2851 6512;6513 6383;6384;6385;6386 6384 6648;6649 4 IDISPSTFRK KSPEIHRRIDISPSTF ISPSTFRKHGLAHDEM R I D R K H 0 1 0 1 0 0 0 0 0 2 0 1 0 1 1 2 1 0 0 0 0 0 10 1 1162.6346 Q9Y2W1 Q9Y2W1 679 688 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0040298 70.399 By MS/MS By MS/MS 1 2 8607800 5212800 3395000 2518 3096 2852 6514;6515;6516 6387;6388;6389 6387 6648;6649 3 IDISPSTLR KSPEIHRRIDISPSTL DISPSTLRKHTRLAGE R I D L R K 0 1 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 9 0 1000.5553 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 655 663 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0046212 95.483 By MS/MS By MS/MS 1 1 1122100000 622910000 499210000 2519 2947 2853 6517;6518 6390;6391;6392;6393 6393 6215 4 IDISPSTLRK KSPEIHRRIDISPSTL ISPSTLRKHTRLAGEE R I D R K H 0 1 0 1 0 0 0 0 0 2 1 1 0 0 1 2 1 0 0 0 0 0 10 1 1128.6503 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 655 664 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 0.0038649 92.112 By MS/MS By MS/MS 2 2 119080000 61408000 57676000 2520 2947 2854 6519;6520;6521;6522 6394;6395;6396;6397;6398;6399 6397 6215 6 IDMTSEKNPQDEQERIEER ITLPIYTKIDMTSEKN EQERIEERLAYIADHL K I D E R L 0 2 1 2 0 2 5 0 0 2 0 1 1 0 1 1 1 0 0 0 0 0 19 2 2346.0758 H0Y931 H0Y931 471 489 ANK2 yes yes 2 0.029219 40.113 By matching By MS/MS 1 1 57217000 33281000 23935000 2521 1151 2855 6523;6524 6400 6400 416 1 IDQASLDYSYAR DIGILRNRIDQASLDY SLDYSYARKRFDRAEA R I D A R K 2 1 0 2 0 1 0 0 0 1 1 0 0 0 0 2 0 0 2 0 0 0 12 0 1400.6572 Q5T7V8 Q5T7V8 235 246 GORAB RAB6-interacting golgin yes yes 2 0.028175 79.489 By MS/MS 1 0 0 0 2522 2247 2856 6525 6401 6401 4501 1 IDSFSVQSLDSR CSSDAFERIDSFSVQS SVQSLDSRSVSEINSD R I D S R S 0 1 0 2 0 1 0 0 0 1 1 0 0 1 0 4 0 0 0 1 0 0 12 0 1352.6572 F8WF45;P82094 F8WF45 326 337 TMF1 TATA element modulatory factor yes no 2 0.00084928 99.834 By MS/MS By MS/MS 1 2 7488900 3353000 4135800 2523 1058 2857 6526;6527;6528 6402;6403 6402 1999;2000 2 IDSIPHLNNSTPLVDPSVYGYGVQK RVRQIAAKIDSIPHLN VYGYGVQKRPLDDGVG K I D Q K R 0 0 2 2 0 1 0 2 1 2 2 1 0 0 3 3 1 0 2 3 0 0 25 0 2712.3759 Q96I24 Q96I24 33 57 FUBP3 Far upstream element-binding protein 3 yes yes 3 1.816E-06 105.56 By MS/MS By MS/MS 1 1 28701000 13166000 15535000 2524 2666 2858 6529;6530 6404;6405 6404 8422;8423 2 IDSNISPK MKTSCKFKIDSNISPK IDSNISPKKDSKEFTQ K I D P K K 0 0 1 1 0 0 0 0 0 2 0 1 0 0 1 2 0 0 0 0 0 0 8 0 872.46035 Q9H501 Q9H501 148 155 ESF1 ESF1 homolog yes yes 2 0.0056941 110.54 By MS/MS By MS/MS 1 1 78492000 42357000 36136000 2525 2837 2859 6531;6532 6406;6407 6406 5957 2 IDSPGFKPASQQVYR AQPQPIHRIDSPGFKP PASQQVYRKDPYPEEM R I D Y R K 1 1 0 1 0 2 0 1 0 1 0 1 0 1 2 2 0 0 1 1 0 0 15 1 1691.8631 A0A087X0K9;G5E9E7 A0A087X0K9 898 912 TJP1 yes no 3 0.00018479 102.5 By MS/MS By MS/MS 1 1 86990000 52763000 34227000 2526 156 2860 6533;6534 6408;6409 6408 254 2 IDSTEVIYQPR GMDTFIHRIDSTEVIY TEVIYQPRRKRAKLIG R I D P R R 0 1 0 1 0 1 1 0 0 2 0 0 0 0 1 1 1 0 1 1 0 0 11 0 1319.6721 K7EMR0;K7EQN8;K7EP59;Q15831 K7EMR0 29 39 STK11 Serine/threonine-protein kinase STK11 yes no 2 0.02379 70.028 By matching By MS/MS 1 1 7206000 4253900 2952100 2527 1385 2861 6535;6536 6410 6410 1 IDSTEVIYQPRR GMDTFIHRIDSTEVIY EVIYQPRRKRAKLIGK R I D R R K 0 2 0 1 0 1 1 0 0 2 0 0 0 0 1 1 1 0 1 1 0 0 12 1 1475.7732 K7EMR0;K7EQN8;K7EP59;Q15831 K7EMR0 29 40 STK11 Serine/threonine-protein kinase STK11 yes no 2 0.028427 46.88 By MS/MS 1 7015800 7015800 0 2528 1385 2862 6537 6411 6411 0 IDSVAAQPTATSPVVYTR SPGFASPKIDSVAAQP TSPVVYTRPAISSFSS K I D T R P 3 1 0 1 0 1 0 0 0 1 0 0 0 0 2 2 3 0 1 3 0 0 18 0 1874.9738 P49790 P49790 622 639 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.0045891 83.891 By MS/MS By matching 1 1 5296000 2834100 2462000 2529 1859 2863 6538;6539 6412 6412 7469 1 IDTHPSPSHSSTVK EREQKRRKIDTHPSPS PSHSSTVKVSIA____ K I D V K V 0 0 0 1 0 0 0 0 2 1 0 1 0 0 2 4 2 0 0 1 0 0 14 0 1491.7318 H7C477;H0Y7U4;A0A0C4DG98;Q8NI27;H0Y594;B7ZBA0 H7C477 148 161 THOC2 THO complex subunit 2 yes no 3 0.00077147 84.859 By MS/MS By matching 1 1 9490300 5662700 3827600 2530 311 2864 6540;6541 6413;6414 6414 544 2 IDTIEIITDR DYFEEYGKIDTIEIIT TIEIITDRQSGKKRGF K I D D R Q 0 1 0 2 0 0 1 0 0 4 0 0 0 0 0 0 2 0 0 0 0 0 10 0 1187.6398 P22626;A0A087WUI2 P22626 138 147 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 1.5059E-24 187.22 By MS/MS By MS/MS 1 1 63265000 35502000 27763000 2531 1749 2865 6542;6543 6415;6416 6416 2 IDTPPACTEESIATPSEIK SPKVKEERIDTPPACT IATPSEIKTENDTVES R I D I K T 2 0 0 1 1 0 3 0 0 3 0 1 0 0 3 2 3 0 0 0 0 0 19 0 2057.9827 O94913 O94913 1528 1546 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 2 0.025772 64.374 By MS/MS 1 7397900 7397900 0 2532 1576 2866 6544 6417 6417 1 IEDLSQQAQLAAAEK YIVFGEAKIEDLSQQA AQLAAAEKFKVQGEAV K I E E K F 4 0 0 1 0 3 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 15 0 1613.8261 F8VZJ2;F8W0W4;H0YHX9;Q13765;E9PAV3;F8W1N5;F8VNW4 F8VZJ2 49 63 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 2 4.9502E-26 164.53 By MS/MS By MS/MS 1 1 14171000 6904000 7266700 2533 841 2867 6545;6546 6418;6419 6418 2 IEDSEPHIPLIDDTDAEDDAPTKR FMTHPEFRIEDSEPHI EDDAPTKRNSSPPP__ R I E K R N 2 1 0 6 0 0 3 0 1 3 1 1 0 0 3 1 2 0 0 0 0 0 24 1 2691.2511 H0YHH6;A0A0U1RQU3;E7ERY9;P20020 H0YHH6 133 156 ATP2B1 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 1 yes no 3 0.00012379 77.522 By MS/MS By MS/MS 1 2 45581000 22535000 23046000 2534 390 2868 6547;6548;6549 6420;6421;6422;6423;6424 6422 716 5 IEDVGSDEEDDSGK KDDEEKPKIEDVGSDE DEEDDSGKDKKKKTKK K I E G K D 0 0 0 4 0 0 3 2 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 0 1493.6005 P08238;Q58FF8 P08238 250 263 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 2.5259E-42 181.75 By MS/MS By MS/MS 2 3 1635800000 855920000 779930000 2535 1658 2869 6550;6551;6552;6553;6554 6425;6426;6427;6428;6429;6430 6426 3127 6 IEDVGSDEEDDSGKDK KDDEEKPKIEDVGSDE EDDSGKDKKKKTKKIK K I E D K K 0 0 0 5 0 0 3 2 0 1 0 2 0 0 0 2 0 0 0 1 0 0 16 1 1736.7224 P08238;Q58FF8 P08238 250 265 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 1.2882E-31 169.98 By MS/MS By MS/MS 2 2 5000300000 2438000000 2562300000 2536 1658 2870 6555;6556;6557;6558 6431;6432;6433;6434;6435;6436;6437 6436 3127 7 IEDVGSDEEDDSGKDKK KDDEEKPKIEDVGSDE DDSGKDKKKKTKKIKE K I E K K K 0 0 0 5 0 0 3 2 0 1 0 3 0 0 0 2 0 0 0 1 0 0 17 2 1864.8174 P08238;Q58FF8 P08238 250 266 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 1.7719E-90 211.26 By MS/MS By MS/MS 2 2 5077000000 2141800000 2935200000 2537 1658 2871 6559;6560;6561;6562 6438;6439;6440;6441;6442 6439 3127 5 IEDVTPIPSDSTR RSGMKIGRIEDVTPIP PIPSDSTRRKGGRRGR R I E T R R 0 1 0 2 0 0 1 0 0 2 0 0 0 0 2 2 2 0 0 1 0 0 13 0 1428.7096 P62263 P62263 129 141 RPS14 40S ribosomal protein S14 yes yes 2 0.00076448 97.797 By matching By MS/MS 1 1 12057000 6939500 5118000 2538 1937 2872 6563;6564 6443 6443 3732 1 IEESSSQSFVASENQVGAAESK ELSATDTKIEESSSQS QVGAAESKIMEKRPEE K I E S K I 3 0 1 0 0 2 4 1 0 1 0 1 0 1 0 6 0 0 0 2 0 0 22 0 2283.0503 Q86UW6;D6R9J2 Q86UW6 94 115 N4BP2 NEDD4-binding protein 2 yes no 3 0.032356 60.388 By MS/MS 2 30677000 30677000 0 2539 2405 2873 6565;6566 6444 6444 1 IEEVLSPEGSPSKSPSK ITIKSPEKIEEVLSPE SPSKSPSKKKKKFRTP K I E S K K 0 0 0 0 0 0 3 1 0 1 1 2 0 0 3 5 0 0 0 1 0 0 17 1 1769.9047 Q9UEY8 Q9UEY8 668 684 ADD3 Gamma-adducin yes yes 2;3 0.00014795 96.561 By MS/MS By MS/MS 2 2 19821000 9835400 9985200 2540 2998 2874 6567;6568;6569;6570 6445;6446;6447;6448 6447 6304;6305;6306 4 IEIAQKHPDIYAVPIK LQEAQNARIEIAQKHP DIYAVPIKTHKPDPGT R I E I K T 2 0 0 1 0 1 1 0 1 4 0 2 0 0 2 0 0 0 1 1 0 0 16 1 1834.0353 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1167 1182 TJP2 Tight junction protein ZO-2 yes no 3 0.00023653 110.55 By MS/MS By MS/MS 1 1 41866000 21222000 20644000 2541 415 2875 6571;6572 6449;6450 6449 8048 2 IEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVK WQKNGVFKIEIIQPLL GSPPPPVKVSSEPPTQ K I E V K V 5 0 4 1 0 1 3 2 0 3 2 1 1 0 6 2 2 0 0 3 0 0 36 0 3653.8611 O95104 O95104 125 160 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 3 2.5353E-15 101.26 By MS/MS By MS/MS 1 1 86502000 45408000 41095000 2542 1580 2876;2877 6573;6574 6451;6452 6452 572 2989 2 IEIPVTPTGQSVPSSPSIPGTPTLK GNGVKKPKIEIPVTPT IPGTPTLKMWGTSPED K I E L K M 0 0 0 0 0 1 1 2 0 3 1 1 0 0 6 4 4 0 0 2 0 0 25 0 2502.3581 Q9H4Z3 Q9H4Z3 130 154 PCIF1 Phosphorylated CTD-interacting factor 1 yes yes 2;3 1.0108E-05 83.834 By MS/MS By MS/MS 4 3 62298000 32883000 29415000 2543 2836 2878;2879 6575;6576;6577;6578;6579;6580;6581 6453;6454;6455;6456;6457;6458;6459 6454 5952;5953;5954;7854 7 IEKLSDDEEVDITDEVDELSSQTPQK DPNLNAVKIEKLSDDE LSSQTPQKNSSSDLLL K I E Q K N 0 0 0 5 0 2 5 0 0 2 2 2 0 0 1 3 2 0 0 2 0 0 26 1 2961.3826 Q5VVJ2 Q5VVJ2 214 239 MYSM1 Histone H2A deubiquitinase MYSM1 yes yes 3 2.8435E-07 98.377 By matching By MS/MS 1 1 72004000 30640000 41364000 2544 2273 2880 6582;6583 6460 6460 4564 1 IEPEPFENCLLRPGSPAR ASYILMEKIEPEPFEN LRPGSPARVVQCISEL K I E A R V 1 2 1 0 1 0 3 1 0 1 2 0 0 1 4 1 0 0 0 0 0 0 18 1 2081.0364 P48637 P48637 401 418 GSS Glutathione synthetase yes yes 3 0.014856 53.777 By MS/MS By matching 1 1 9586900 5344900 4241900 2545 1847 2881 6584;6585 6461 6461 3549 1 IEPIPGESPK KGQEVCVKIEPIPGES PIPGESPKMFGRHFEA K I E P K M 0 0 0 0 0 0 2 1 0 2 0 1 0 0 3 1 0 0 0 0 0 0 10 0 1065.5706 A0A087WUT6;O60841 A0A087WUT6 1161 1170 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.022867 62.408 By MS/MS By MS/MS 1 1 16038000 6601700 9436600 2546 60 2882 6586;6587 6462;6463 6462 103 2 IESDEEEDFENVGK ESTKKPYRIESDEEED EDFENVGKVGSPLDYS R I E G K V 0 0 1 2 0 0 5 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 14 0 1638.6897 Q96T23 Q96T23 1343 1356 RSF1 Remodeling and spacing factor 1 yes yes 2 2.4903E-80 212.03 By MS/MS By MS/MS 1 1 82553000 47923000 34631000 2547 2714 2883 6588;6589 6464;6465 6465 5616 2 IESDVQEPTEPEDDLDIMLGNK EEGVKDLKIESDVQEP LDIMLGNKKKKKKNVK K I E N K K 0 0 1 4 0 1 4 1 0 2 2 1 1 0 2 1 1 0 0 1 0 0 22 0 2486.137 P20042 P20042 103 124 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2;3 7.0339E-05 122.64 By MS/MS By MS/MS 2 2 38557000 17858000 20698000 2548 1735 2884;2885 6590;6591;6592;6593 6466;6467;6468;6469;6470 6470 650 3271;7407 5 IESDVQEPTEPEDDLDIMLGNKK EEGVKDLKIESDVQEP DIMLGNKKKKKKNVKF K I E K K K 0 0 1 4 0 1 4 1 0 2 2 2 1 0 2 1 1 0 0 1 0 0 23 1 2614.232 P20042 P20042 103 125 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 0.0093818 62.739 By MS/MS By MS/MS 1 1 11396000 7042200 4353500 2549 1735 2886 6594;6595 6471;6472 6472 3271;7407 1 IESPDSSSSSLSSGSSPPGSLPSAR GSAAAVPKIESPDSSS PGSLPSARPLSLDGAD K I E A R P 1 1 0 1 0 0 1 2 0 1 2 0 0 0 4 12 0 0 0 0 0 0 25 0 2375.1088 Q12948 Q12948 257 281 FOXC1 Forkhead box protein C1 yes yes 2;3 0.00072264 71.781 By MS/MS By MS/MS 1 3 37760000 12102000 25659000 2550 2035 2887 6596;6597;6598;6599 6473;6474;6475;6476 6475 3993;3994;3995;3996;3997 3 IESPKLER VVTQPKPKIESPKLER IESPKLERTPNGPNID K I E E R T 0 1 0 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 8 1 970.54475 Q5TBM3;A0A0A0MSM0;Q92598 Q5TBM3 71 78 HSPH1 Heat shock protein 105 kDa yes no 2 0.021561 86.189 By matching By MS/MS 1 1 965770000 550020000 415760000 2551 254 2888 6600;6601 6477 6477 446 1 IESYEGR NPTQLMARIESYEGRE RIESYEGREKKGISDV R I E G R E 0 1 0 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 7 0 852.39775 C9JPX5;C9JKL2;O95772;C9JJ39;C9J3F5 C9JPX5 37 43 STARD3NL MLN64 N-terminal domain homolog yes no 2 0.016805 109.71 By MS/MS By MS/MS 2 1 16395000 10569000 5826400 2552 672 2889 6602;6603;6604 6478;6479;6480 6479 1241 3 IETDEEESCDNAHGDANQPAR PSRKRLHRIETDEEES GDANQPARDSQPRVLP R I E A R D 3 1 2 3 1 1 4 1 1 1 0 0 0 0 1 1 1 0 0 0 0 0 21 0 2356.9462 Q96T23 Q96T23 1303 1323 RSF1 Remodeling and spacing factor 1 yes yes 3 0.00017743 86.016 By MS/MS By matching 1 1 18743000 9142000 9601200 2553 2714 2890 6605;6606 6481 6481 7811 1 IETIEVMEDR DYFEKYGKIETIEVME TIEVMEDRQSGKKRGF K I E D R Q 0 1 0 1 0 0 3 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1233.5911 P51991 P51991 152 161 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 2 1.0806E-07 172.23 By MS/MS By MS/MS 2 2 49541000 25584000 23957000 2554 1883 2891;2892 6607;6608;6609;6610 6482;6483;6484;6485;6486 6486 736 5 IEVDEGFCSPKPSEIK SSIGAQFKIEVDEGFC SPKPSEIKDFSYVYKP K I E I K D 0 0 0 1 1 0 3 1 0 2 0 2 0 1 2 2 0 0 0 1 0 0 16 1 1833.8819 Q9UHV7 Q9UHV7 882 897 MED13 Mediator of RNA polymerase II transcription subunit 13 yes yes 2 1.3547E-06 129.88 By MS/MS By MS/MS 1 1 34855000 15477000 19378000 2555 3007 2893 6611;6612 6487;6488 6488 6337 2 IEVIEIMTDR DYFEQYGKIEVIEIMT VIEIMTDRGSGKKRGF K I E D R G 0 1 0 1 0 0 2 0 0 3 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1217.6326 F8W6I7;P09651;F8VTQ5;F8VZ49;Q32P51;F8VYN5;H0YH80 F8W6I7 131 140 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 0.00095848 123.88 By MS/MS By MS/MS 2 2 78642000 44777000 33865000 2556 1033 2894;2895 6613;6614;6615;6616 6489;6490;6491;6492 6489 375 4 IEVKEESPQSK EGLEECSKIEVKEESP KEESPQSKAETELKAS K I E S K A 0 0 0 0 0 1 3 0 0 1 0 2 0 0 1 2 0 0 0 1 0 0 11 1 1272.6561 P11171 P11171 182 192 EPB41 Protein 4.1 yes yes 3 0.027335 48.277 By MS/MS 1 4225000 0 4225000 2557 1681 2896 6617 6493 6493 3165;3166 1 IEVLDSPASK NSEGGKGKIEVLDSPA VLDSPASKKKK_____ K I E S K K 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 0 0 0 1 0 0 10 0 1057.5655 Q8N5I9 Q8N5I9 173 182 C12orf45 Uncharacterized protein C12orf45 yes yes 2 0.0010386 111.63 By MS/MS By MS/MS 1 1 18656000 9453000 9202900 2558 2477 2897 6618;6619 6494;6495 6494 5065;5066 2 IEVLPVDTGAGGYSGNSGSPK PLVLPSSRIEVLPVDT SGNSGSPKNGKLIIPP R I E P K N 1 0 1 1 0 0 1 5 0 1 1 1 0 0 2 3 1 0 1 2 0 0 21 0 2003.98 X6RAB3;Q92738 X6RAB3 721 741 USP6NL USP6 N-terminal-like protein yes no 2 5.6067E-05 97.57 By matching By MS/MS 1 1 47927000 29849000 18078000 2559 2599 2898 6620;6621 6496 6496 5338;5339 1 IEYQFFEDR AQPKGDPRIEYQFFED EYQFFEDRHSAIKLRP R I E D R H 0 1 0 1 0 1 2 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 9 0 1245.5666 Q9NYU2 Q9NYU2 964 972 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 2 0.010155 99.442 By MS/MS 1 2414700 2414700 0 2560 2951 2899 6622 6497 6497 1 IFDPQNPDENE LFPFTHVKIFDPQNPD PQNPDENE________ K I F N E - 0 0 2 2 0 1 2 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 11 0 1316.5521 P46109 P46109 293 303 CRKL Crk-like protein yes yes 2 0.004563 89.827 By MS/MS By matching 1 1 15548000 8069000 7478700 2561 1838 2900 6623;6624 6498 6498 1 IFFDTDDDDDMPHSTSR SPNCVKPKIFFDTDDD DMPHSTSRWRDTANDN K I F S R W 0 1 0 6 0 0 0 0 1 1 0 0 1 2 1 2 2 0 0 0 0 0 17 0 2012.8058 Q8NG27 Q8NG27 273 289 PJA1 E3 ubiquitin-protein ligase Praja-1 yes yes 2;3 2.5826E-07 133.86 By MS/MS By MS/MS 2 4 101730000 51907000 49827000 2562 2521 2901;2902 6625;6626;6627;6628;6629;6630 6499;6500;6501;6502;6503;6504;6505 6503 1015 7740 7 IFGVTTLDIVR HGVYNPNKIFGVTTLD VTTLDIVRANTFVAEL K I F V R A 0 1 0 1 0 0 0 1 0 2 1 0 0 1 0 0 2 0 0 2 0 0 11 0 1232.7129 G3XAL0;P40926 G3XAL0 59 69 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 2 0.0040533 99.688 By MS/MS By MS/MS 1 1 7731000 4698500 3032400 2563 1091 2903 6631;6632 6506;6507 6506 2 IFIGTFK RCILQDGRIFIGTFKA RIFIGTFKAFDKHMNL R I F F K A 0 0 0 0 0 0 0 1 0 2 0 1 0 2 0 0 1 0 0 0 0 0 7 0 824.47963 J3QLE5;P63162;P14678;J3KRY3;S4R3P3 J3QLE5 26 32 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B yes no 2 0.00067527 126.24 By MS/MS By MS/MS 1 1 2097200 2097200 0 2564 1349 2904 6633;6634 6508;6509 6509 2 IFNSDISNKLEQIPRVYDVVTPK EYSKLNSRIFNSDISN VYDVVTPKIEAWRRAL R I F P K I 0 1 2 2 0 1 1 0 0 3 1 2 0 1 2 2 1 0 1 3 0 0 23 2 2674.433 Q6ZW61 Q6ZW61 647 669 BBS12 Bardet-Biedl syndrome 12 protein yes yes 3 0.026764 51.876 By MS/MS 1 0 0 0 2565 2355 2905 6635 6510 6510 4775 1 IFPDRLSGEMPPASPSFPR EINLNKDRIFPDRLSG PASPSFPRNKRTDANE R I F P R N 1 2 0 1 0 0 1 1 0 1 1 0 1 2 5 3 0 0 0 0 0 0 19 1 2100.0462 Q96JM7 Q96JM7 595 613 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 yes yes 3 0.03105 48.314 By MS/MS 1 0 0 0 2566 2675 2906 6636 6511 6511 1064 5531 1 IFPLRPDYQEPSR GSNSTYDRIFPLRPDY PDYQEPSRLIRKLPEF R I F S R L 0 2 0 1 0 1 1 0 0 1 1 0 0 1 3 1 0 0 1 0 0 0 13 1 1616.8311 Q5T241;H0Y570;Q16832 Q5T241 84 96 DDR2 Discoidin domain-containing receptor 2 yes no 2 0.0063842 68.536 By MS/MS By matching 1 1 21243000 11276000 9966700 2567 1127 2907 6637;6638 6512 6512 8151 1 IFPPETSASVAATPPPSTASAPAAVNSSASADKPLSNMK LKVKKQDRIFPPETSA DKPLSNMKILTLGKLS R I F M K I 9 0 2 1 0 0 1 0 0 1 1 2 1 1 7 8 3 0 0 2 0 0 39 1 3766.8724 P09874 P09874 356 394 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.011777 43.873 By MS/MS By MS/MS 2 2 71691000 36000000 35691000 2568 1665 2908;2909 6639;6640;6641;6642 6513;6514 6513 616 3143;3144;7381 2 IFTFDAMFSTNYSHMENYRKR DGGTIKQKIFTFDAMF HMENYRKREDLVYQST K I F K R E 1 2 2 1 0 0 1 0 1 1 0 1 2 3 0 2 2 0 2 0 0 0 21 2 2657.2155 Q96ID5 Q96ID5 72 92 IGSF21 Immunoglobulin superfamily member 21 yes yes 3 0.020311 49.537 By MS/MS 1 5121100 5121100 0 2569 2667 2910 6643 6515 6515 1062 5497;8424 0 IFVGGLNPEATEEK MKKDPVKKIFVGGLNP NPEATEEKIREYFGEF K I F E K I 1 0 1 0 0 0 3 2 0 1 1 1 0 1 1 0 1 0 0 1 0 0 14 0 1502.7617 D6R9P3;D6RD18;D6RBZ0 D6R9P3 156 169 HNRNPAB yes no 2 0.0014908 113.69 By MS/MS By MS/MS 1 1 31338000 16355000 14983000 2570 729 2911 6644;6645 6516;6517 6517 2 IFVGGLSPDTPEEK KTKEPVKKIFVGGLSP SPDTPEEKIREYFGGF K I F E K I 0 0 0 1 0 0 2 2 0 1 1 1 0 1 2 1 1 0 0 1 0 0 14 0 1487.7508 D6RAF8;Q14103;H0YA96;H0Y8G5;D6RF44 D6RAF8 184 197 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.00013952 123.62 By MS/MS By matching 2 2 64132000 34229000 29903000 2571 741 2912;2913 6646;6647;6648;6649 6518;6519 6518 7051 2 IGAEVYHNLK ANFREAMRIGAEVYHN AEVYHNLKNVIKEKYG R I G L K N 1 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 1 1 0 0 10 0 1142.6084 P06733;K7EM90 P06733 184 193 ENO1 Alpha-enolase;Enolase yes no 3 0.015154 62.582 By matching By MS/MS 1 1 8025200 4801100 3224100 2572 1646 2914 6650;6651 6520 6520 0 IGDEYAEDSSDEEDIR RTEMASARIGDEYAED SSDEEDIRNTVGNVPL R I G I R N 1 1 0 4 0 0 4 1 0 2 0 0 0 0 0 2 0 0 1 0 0 0 16 0 1841.7439 Q14137;A0A075B729 Q14137 118 133 BOP1 Ribosome biogenesis protein BOP1 yes no 2 3.2311E-73 186.17 By MS/MS By MS/MS 3 2 0 0 0 2573 2084 2915 6652;6653;6654;6655;6656 6521;6522;6523;6524;6525 6524 4111;4112 5 IGEGTYGTVFK QKYEKLEKIGEGTYGT GTYGTVFKAKNRETHE K I G F K A 0 0 0 0 0 0 1 3 0 1 0 1 0 1 0 0 2 0 1 1 0 0 11 0 1170.5921 Q00535 Q00535 10 20 CDK5 Cyclin-dependent-like kinase 5 yes yes 2 0.0069511 87.308 By MS/MS By MS/MS 1 1 8350100 4581800 3768300 2574 1973 2916 6657;6658 6526;6527 6527 7511 1 IGEGTYGVVYK EDYTKIEKIGEGTYGV GTYGVVYKGRHKTTGQ K I G Y K G 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 0 11 0 1184.6077 E5RIU6;A0A087WZZ9;P06493;G3V317;K7ELV5;E7ESI2;A0A024QZP7;G3V5T9;P24941;Q00526 E5RIU6 10 20 CDK1;CDK2;CDK3;CDC2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 no no 1;2 2.3423E-06 142.36 By MS/MS By MS/MS 5 5 2627800000 1433500000 1194400000 2575 150;1086 2917;2918 6659;6660;6661;6662;6663;6664;6665;6666;6667;6668 6528;6529;6530;6531;6532;6533;6534;6535;6536 6528 6867;7998 9 IGELGAPEVWGLSPK KRLSERERIGELGAPE EVWGLSPKNPEPDSDE R I G P K N 1 0 0 0 0 0 2 3 0 1 2 1 0 0 2 1 0 1 0 1 0 0 15 0 1551.8297 Q8N5F7 Q8N5F7 137 151 NKAP NF-kappa-B-activating protein yes yes 2 2.6158E-21 160.09 By MS/MS By MS/MS 1 1 644330000 385380000 258950000 2576 2476 2919 6669;6670 6537;6538;6539 6537 5063 3 IGFPSTTPAK APVHKVTKIGFPSTTP FPSTTPAKAKANAVRR K I G A K A 1 0 0 0 0 0 0 1 0 1 0 1 0 1 2 1 2 0 0 0 0 0 10 0 1017.5495 F5H6A0;J3KP58;P30622;F5H1T5;F6VGP8 F5H6A0 281 290 CLIP1 CAP-Gly domain-containing linker protein 1 yes no 2 0.0059708 104.44 By MS/MS By matching 1 1 6814500 3596200 3218300 2577 981 2920 6671;6672 6540 6540 7140 1 IGGDAATTVNNSTPDFGFGGQK RARQIAAKIGGDAATT DFGFGGQKRQLEDGDQ K I G Q K R 2 0 2 2 0 1 0 5 0 1 0 1 0 2 1 1 3 0 0 1 0 0 22 0 2153.0025 A0A087WTP3;Q92945;M0R0I5 A0A087WTP3 88 109 KHSRP Far upstream element-binding protein 2 yes no 2 0.0021979 71.279 By MS/MS By MS/MS 1 1 11465000 5409800 6054700 2578 39 2921 6673;6674 6541;6542 6542 1;2 73;6840 2 IGGDAATTVNNSTPDFGFGGQKR RARQIAAKIGGDAATT FGFGGQKRQLEDGDQP K I G K R Q 2 1 2 2 0 1 0 5 0 1 0 1 0 2 1 1 3 0 0 1 0 0 23 1 2309.1036 A0A087WTP3;Q92945;M0R0I5 A0A087WTP3 88 110 KHSRP Far upstream element-binding protein 2 yes no 3 0.0055806 84.646 By matching By MS/MS 1 1 15713000 10151000 5562000 2579 39 2922 6675;6676 6543 6543 1;2 73;6840 1 IGGIGTVPVGR LPLQDVYKIGGIGTVP IGTVPVGRVETGVLKP K I G G R V 0 1 0 0 0 0 0 4 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1024.6029 Q5VTE0;P68104;A0A087WVQ9 Q5VTE0 256 266 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 no no 2 2.4423E-05 132.76 By MS/MS By MS/MS 1 1 77600000 38187000 39413000 2580 1956 2923 6677;6678 6544;6545 6545 2 IGIEIIK TPANEDQKIGIEIIKR KIGIEIIKRTLKIPAM K I G I K R 0 0 0 0 0 0 1 1 0 4 0 1 0 0 0 0 0 0 0 0 0 0 7 0 784.50584 P10809 P10809 463 469 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 8.5093E-08 143.37 By MS/MS 1 0 0 0 2581 1677 2924 6679 6546 6546 1 IGLFGGAGVGK APYAKGGKIGLFGGAG FGGAGVGKTVLIMELI K I G G K T 1 0 0 0 0 0 0 5 0 1 1 1 0 1 0 0 0 0 0 1 0 0 11 0 974.55492 H0YH81;P06576;F8W079 H0YH81 139 149 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 2 0.01157 101.6 By MS/MS By MS/MS 1 1 3957100 3957100 0 2582 1184 2925 6680;6681 6547;6548 6547 2 IGNTSPLTTLPESSAFAK MLAATCNKIGNTSPLT PESSAFAKGGFHPWKR K I G A K G 2 0 1 0 0 0 1 1 0 1 2 1 0 1 2 3 3 0 0 0 0 0 18 0 1832.952 P0CG40 P0CG40 27 44 SP9 Transcription factor Sp9 yes yes 2 0.00033384 114.56 By MS/MS By MS/MS 1 1 29129000 13884000 15245000 2583 1669 2926 6682;6683 6549;6550;6551 6551 3149 3 IGPLGLSPK ATSALAPKIGPLGLSP GPLGLSPKKVGDDIAK K I G P K K 0 0 0 0 0 0 0 2 0 1 2 1 0 0 2 1 0 0 0 0 0 0 9 0 880.5382 P30050 P30050 32 40 RPL12 60S ribosomal protein L12 yes yes 2 0.0031977 109.39 By MS/MS By MS/MS 2 3 71843000 37995000 33847000 2584 1778 2927;2928 6684;6685;6686;6687;6688 6552;6553;6554;6555;6556;6557 6555 3364 6 IGPPSPGDDEEEAAAAAGAPAAAGATGDLASAQLGGAPNR ________________ QLGGAPNRWEVLSATP - I G N R W 13 1 1 3 0 1 3 7 0 1 2 0 0 0 5 2 1 0 0 0 0 0 40 0 3570.6823 H0Y6K5;Q02447 H0Y6K5 1 40 SP3 Transcription factor Sp3 yes no 3 4.4786E-06 65.058 By MS/MS By matching 1 1 31491000 12365000 19126000 2585 1135 2929 6689;6690 6558 6558 2159 1 IGQEIAEAVTATNPK ATKEQSFKIGQEIAEA AVTATNPKPVKLKFEK K I G P K P 3 0 1 0 0 1 2 1 0 2 0 1 0 0 1 0 2 0 0 1 0 0 15 0 1540.8097 O60673;A0A087WZU4 O60673 2800 2814 REV3L DNA polymerase zeta catalytic subunit yes no 2 0.032337 62.891 By matching By MS/MS 1 1 14341000 6226600 8114000 2586 1524 2930 6691;6692 6559 6559 1 IGQGMLSIGYAVYQVPK KNRRWRKRIGQGMLSI YAVYQVPKELESHTDA R I G P K E 1 0 0 0 0 2 0 3 0 2 1 1 1 0 1 1 0 0 2 2 0 0 17 0 1822.9651 A6NHC0 A6NHC0 424 440 CAPN8 Calpain-8 yes yes 2 0.015655 46.985 By MS/MS 1 20850000 20850000 0 2587 469 2931 6693 6560 6560 8050;8051 1 IGSDPLAYEPK SPTMSRARIGSDPLAY DPLAYEPKEDLPVITI R I G P K E 1 0 0 1 0 0 1 1 0 1 1 1 0 0 2 1 0 0 1 0 0 0 11 0 1188.6027 P19634 P19634 701 711 SLC9A1 Sodium/hydrogen exchanger 1 yes yes 2 7.7601E-06 139.48 By MS/MS By MS/MS 1 1 72323000 37566000 34757000 2588 1733 2932 6694;6695 6561;6562 6562 3265 2 IGSLGLGTGEDDDYVDDFNSTSHR DLKLISDKIGSLGLGT DFNSTSHRSEKSEISI K I G H R S 0 1 1 5 0 0 1 4 1 1 2 0 0 1 0 3 2 0 1 1 0 0 24 0 2569.1205 O95684;A0A087WV25 O95684 324 347 FGFR1OP FGFR1 oncogene partner yes no 2;3 1.0117E-37 171.13 By MS/MS By MS/MS 2 1 272010000 147470000 124540000 2589 1605 2933 6696;6697;6698 6563;6564 6564 8212 2 IGSLIDVNQSK HISFTTSKIGSLIDVN LIDVNQSKDPEGLRVF K I G S K D 0 0 1 1 0 1 0 1 0 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1172.6401 F5H6P7;P61326;Q96A72 F5H6P7 60 70 MAGOHB;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 yes no 2 0.0010315 106.54 By MS/MS By MS/MS 1 1 17849000 8692300 9156800 2590 983 2934 6699;6700 6565;6566 6565 1844 2 IGSMTGAEQALLPR YNLQERRRIGSMTGAE AEQALLPRVPTDEIEA R I G P R V 2 1 0 0 0 1 1 2 0 1 2 0 1 0 1 1 1 0 0 0 0 0 14 0 1442.7551 P04920 P04920 241 254 SLC4A2 Anion exchange protein 2 yes yes 2 0.0028801 76.358 By MS/MS By MS/MS 2 1 15800000 8436200 7364300 2591 1636 2935 6701;6702;6703 6567;6568;6569 6569 591 3089 2 IGSTTNPFLDIPHDPNAAVYK THPKTISRIGSTTNPF DPNAAVYKSGFLARKI R I G Y K S 2 0 2 2 0 0 0 1 1 2 1 1 0 1 3 1 2 0 1 1 0 0 21 0 2269.1379 A0A087X1Z0;A0A087WXD8;B4DKF8;E5RJ29;Q9NYI0 A0A087X1Z0 96 116 PSD3 PH and SEC7 domain-containing protein 3 yes no 3 0.02095 45.138 By matching By MS/MS 1 1 9511200 5343900 4167400 2592 104 2936 6704;6705 6570 6570 186 1 IGTAEPDYGALYEGR INEEALEKIGTAEPDY YGALYEGRNPGFYVEA K I G G R N 2 1 0 1 0 0 2 3 0 1 1 0 0 0 1 0 1 0 2 0 0 0 15 0 1610.7577 P19174 P19174 764 778 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 2;3 5.9179E-16 151.79 By MS/MS By MS/MS 2 2 282710000 155760000 126960000 2593 1731 2937 6706;6707;6708;6709 6571;6572;6573 6571 8237;8238 3 IGTAEPDYGALYEGRNPGFYVEANPMPTFK INEEALEKIGTAEPDY ANPMPTFKCAVKALFD K I G F K C 3 1 2 1 0 0 3 4 0 1 1 1 1 2 4 0 2 0 3 1 0 0 30 1 3303.5547 P19174 P19174 764 793 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 3 0.029308 40.92 By MS/MS By matching 1 1 17361000 8929800 8431500 2594 1731 2938 6710;6711 6574 6574 648 8237;8238;8239 1 IGTLHTSPDLK FVRKTTEKIGTLHTSP LHTSPDLKVRPELRGD K I G L K V 0 0 0 1 0 0 0 1 1 1 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1180.6452 Q9UPZ3 Q9UPZ3 557 567 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 2 0.004109 83.647 By MS/MS By matching 1 1 12969000 6463900 6504900 2595 3073 2939 6712;6713 6575 6575 6500 1 IGVAKPLPLSPEEGYVSAK GAPSGTVRIGVAKPLP EEGYVSAKEDSFLYPP R I G A K E 2 0 0 0 0 0 2 2 0 1 2 2 0 0 3 2 0 0 1 2 0 0 19 1 1954.0775 F5H1U9;O75970 F5H1U9 781 799 MPDZ Multiple PDZ domain protein yes no 3 0.0012712 72.676 By MS/MS By matching 1 1 8532200 3811800 4720400 2596 962 2940 6714;6715 6576 6576 1812 1 IGVLDEGK ALLRRLVRIGVLDEGK IGVLDEGKMKLDYILG R I G G K M 0 0 0 1 0 0 1 2 0 1 1 1 0 0 0 0 0 0 0 1 0 0 8 0 829.45453 A0A024R4M0;P46781;B5MCT8;C9JM19 A0A024R4M0 84 91 RPS9 40S ribosomal protein S9 yes no 2 0.018715 100.19 By MS/MS By MS/MS 1 1 7124000 3160300 3963700 2597 3 2941 6716;6717 6577;6578 6577 2 IHCKSPPPSPGPLGYSSVGTPVGAPLSPVLDPAR SSLRKHMKIHCKSPPP SPVLDPARSHSSTLSP K I H A R S 2 1 0 1 1 0 0 4 1 1 3 1 0 0 9 5 1 0 1 3 0 0 34 1 3406.7707 Q96T25 Q96T25 574 607 ZIC5 Zinc finger protein ZIC 5 yes yes 3 0.0091337 47.537 By MS/MS By matching 1 1 20273000 6358300 13915000 2598 2715 2942 6718;6719 6579 6579 5620;5621;5622;5623 1 IHFPLATYAPVISAEK TNLVPYPRIHFPLATY APVISAEKAYHEQLTV R I H E K A 3 0 0 0 0 0 1 0 1 2 1 1 0 1 2 1 1 0 1 1 0 0 16 0 1755.956 F5H5D3;Q9BQE3;F8VVB9;C9JDS9;P68363;P68366;Q71U36;Q6PEY2;Q13748 P68363 335 350 TUBA1C;TUBA1B;TUBA4A;TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain no no 3 0.020811 45.883 By MS/MS 1 0 0 0 2599 976;1957;2360 2943 6720 6580 6580 1 IHGSGHVEEPASPLAAYQK TKETLKPKIHGSGHVE SPLAAYQKSLEETSKL K I H Q K S 3 0 0 0 0 1 2 2 2 1 1 1 0 0 2 2 0 0 1 1 0 0 19 0 1989.9908 H0Y3A4;A0A087WZ65;A0A087WTF3;Q12955;H0Y951;A0A087WY90 H0Y3A4 369 387 ANK3 Ankyrin-3 yes no 3 0.0011229 70.501 By MS/MS By MS/MS 1 1 19452000 8325700 11126000 2600 31 2944 6721;6722 6581;6582 6581 61 2 IHLGSSPK NQGVSEERIHLGSSPK IHLGSSPKKGGNCDLS R I H P K K 0 0 0 0 0 0 0 1 1 1 1 1 0 0 1 2 0 0 0 0 0 0 8 0 837.47085 Q5JW53;Q9H410 Q5JW53 53 60 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.017013 76.1 By MS/MS By MS/MS 1 1 97973000 54090000 43883000 2601 2226 2945 6723;6724 6583;6584 6583 4456;4457 2 IHNVGSPLK DLERLLSKIHNVGSPL HNVGSPLKSQNHPDSR K I H L K S 0 0 1 0 0 0 0 1 1 1 1 1 0 0 1 1 0 0 0 1 0 0 9 0 963.55016 P52701;A0A087WWJ1 P52701 825 833 MSH6 DNA mismatch repair protein Msh6 yes no 2 0.0014684 113.67 By MS/MS By MS/MS 1 1 29126000 16853000 12274000 2602 1888 2946 6725;6726 6585;6586 6585 3658 2 IHPMAYQLQLQAASNFKSPVK VPRLYGFKIHPMAYQL SNFKSPVKTIR_____ K I H V K T 3 0 1 0 0 3 0 0 1 1 2 2 1 1 2 2 0 0 1 1 0 0 21 1 2370.2518 Q5SRQ6;P67870 Q5SRQ6 211 231 CSNK2B Casein kinase II subunit beta yes no 3;4 1.956E-11 135.37 By MS/MS By MS/MS 3 3 213330000 122190000 91139000 2603 1954 2947;2948 6727;6728;6729;6730;6731;6732 6587;6588;6589;6590;6591;6592;6593;6594;6595 6587 768 3739;3740 9 IHRASDPGLPAEEPK GRFHLPPRIHRASDPG GLPAEEPKEKSSRKVA R I H P K E 2 1 0 1 0 0 2 1 1 1 1 1 0 0 3 1 0 0 0 0 0 0 15 1 1615.8318 F8VPD4;P27708 F8VPD4 1792 1806 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 2;3 0.0034268 79.332 By MS/MS By MS/MS 2 2 146130000 81435000 64691000 2604 1000 2949 6733;6734;6735;6736 6596;6597;6598;6599 6598 1878 4 IHSPIPDMSK TSPSTATKIHSPIPDM SPIPDMSKFATGITPF K I H S K F 0 0 0 1 0 0 0 0 1 2 0 1 1 0 2 2 0 0 0 0 0 0 10 0 1123.5696 Q6NZY4 Q6NZY4 656 665 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 2 0.00077929 112.94 By MS/MS By MS/MS 1 2 97457000 26771000 70687000 2605 2310 2950;2951 6737;6738;6739 6600;6601;6602 6601 927 4659 3 IIASLADRPYEEPPQKPPR QLLGHRKRIIASLADR EPPQKPPRFSQLRCQD R I I P R F 2 2 0 1 0 1 2 0 0 2 1 1 0 0 5 1 0 0 1 0 0 0 19 2 2176.1641 Q92625 Q92625 825 843 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 3 5.1342E-05 118.55 By MS/MS By MS/MS 1 1 34820000 13249000 21571000 2606 2592 2952 6740;6741 6603;6604;6605 6605 5324;8410 3 IIDDSEITKEDDALWPPPDR SVMEELKRIIDDSEIT ALWPPPDRVGRQELEI R I I D R V 1 1 0 5 0 0 2 0 0 3 1 1 0 0 3 1 1 1 0 0 0 0 20 1 2324.1172 F5H6P7;P61326;Q96A72;F5H3U9;F5H6N1 F5H6P7 19 38 MAGOHB;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 yes no 3 0.013545 63.578 By MS/MS By matching 1 1 14656000 7994400 6662100 2607 983 2953 6742;6743 6606 6606 1 IIENNTASKRHVGR WYWKQEDKIIENNTAS ASKRHVGRQAGFPKDY K I I G R Q 1 2 2 0 0 0 1 1 1 2 0 1 0 0 0 1 1 0 0 1 0 0 14 2 1593.8699 H0Y9B2;Q8IY21 H0Y9B2 35 48 DDX60 Probable ATP-dependent RNA helicase DDX60 yes no 3 0.030569 62.89 By MS/MS 1 0 0 0 2608 1152 2954 6744 6607 6607 1 IIEQLSPQAATSR TSLRQINKIIEQLSPQ SPQAATSRDINRKLDS K I I S R D 2 1 0 0 0 2 1 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 13 0 1412.7623 D6R9X7;Q03468 D6R9X7 153 165 ERCC6 DNA excision repair protein ERCC-6 yes no 2 0.0047144 90.05 By matching By MS/MS 1 1 13147000 6442100 6704500 2609 735 2955 6745;6746 6608 6608 1334 0 IIGEDSPSRLDR LYKGTITRIIGEDSPS DSPSRLDRGREDSLPK R I I D R G 0 2 0 2 0 0 1 1 0 2 1 0 0 0 1 2 0 0 0 0 0 0 12 1 1356.6997 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7;C9JQE8 C9JE98 1236 1247 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.0015739 100.02 By MS/MS By matching 1 1 40221000 21667000 18554000 2610 625 2956 6747;6748 6609 6609 1166 1 IIKTPMDMGTIK LNLPDYYKIIKTPMDM PMDMGTIKKRLENNYY K I I I K K 0 0 0 1 0 0 0 1 0 3 0 2 2 0 1 0 2 0 0 0 0 0 12 1 1346.7302 M0QZD9;O60885;M0QYW0 M0QZD9 100 111 BRD4 Bromodomain-containing protein 4 yes no 3 0.031798 47.559 By MS/MS 1 0 0 0 2611 1413 2957 6749 6610 6610 493 1 IILDLISESPIK DRVVECIKIILDLISE LISESPIKGRAQPYDP K I I I K G 0 0 0 1 0 0 1 0 0 4 2 1 0 0 1 2 0 0 0 0 0 0 12 0 1339.7963 P61978;Q5T6W2 P61978 208 219 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 9.0548E-86 219.97 By MS/MS By MS/MS 2 2 56814000 36293000 20521000 2612 1931 2958;2959 6750;6751;6752;6753 6611;6612;6613;6614 6613 3725;3726 4 IILDLISESPIKGR DRVVECIKIILDLISE SESPIKGRAQPYDPNF K I I G R A 0 1 0 1 0 0 1 1 0 4 2 1 0 0 1 2 0 0 0 0 0 0 14 1 1552.9188 P61978;Q5T6W2 P61978 208 221 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2;3 3.6864E-21 158.14 By MS/MS By MS/MS 2 2 165420000 94018000 71404000 2613 1931 2960 6754;6755;6756;6757 6615;6616;6617;6618 6618 3725;3726 4 IILNSHSPAGSAAISQQDFHPK DFLFRASRIILNSHSP SQQDFHPKCSTANSRL R I I P K C 3 0 1 1 0 2 0 1 2 3 1 1 0 1 2 4 0 0 0 0 0 0 22 0 2317.1815 Q9UPU5 Q9UPU5 1606 1627 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 3 5.2952E-05 110.64 By MS/MS By MS/MS 1 1 28253000 14668000 13586000 2614 3069 2961 6758;6759 6619;6620 6619 6492;6493 2 IINDLLQSLR DRCEHAARIINDLLQS NDLLQSLRSGPPGPPG R I I L R S 0 1 1 1 0 1 0 0 0 2 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1183.6925 A0A087WTP3;Q92945 A0A087WTP3 385 394 KHSRP Far upstream element-binding protein 2 yes no 2 0.029334 70.399 By MS/MS 1 3480800 3480800 0 2615 39 2962 6760 6621 6621 1 IINEPTAAAIAY IAGLNVLRIINEPTAA PTAAAIAY________ R I I A Y - 4 0 1 0 0 0 1 0 0 3 0 0 0 0 1 0 1 0 1 0 0 0 12 0 1245.6605 E9PK54 E9PK54 172 183 HSPA8 yes yes 2 0.00029965 106.18 By MS/MS By MS/MS 1 1 24585000 10048000 14537000 2616 894 2963 6761;6762 6622;6623;6624 6623 3 IINEPTAAAIAYGLDK IAGLNVLRIINEPTAA AIAYGLDKKVGAERNV R I I D K K 4 0 1 1 0 0 1 1 0 3 1 1 0 0 1 0 1 0 1 0 0 0 16 0 1658.8879 P11142;E9PKE3;E9PN89;P54652;E9PLF4;E9PI65;P11021 P11142 172 187 HSPA8;HSPA2;HSPA5 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;78 kDa glucose-regulated protein no no 2 2.412E-06 127.02 By MS/MS By MS/MS 1 1 25290000 15004000 10286000 2617 1680;1679 2964 6763;6764 6625;6626 6625 2 IINEPTAAAIAYGLDKK IAGLNVLRIINEPTAA IAYGLDKKVGAERNVL R I I K K V 4 0 1 1 0 0 1 1 0 3 1 2 0 0 1 0 1 0 1 0 0 0 17 1 1786.9829 P11142;E9PKE3;E9PN89;P54652;E9PI65 P11142 172 188 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 3 0.00050033 80.361 By MS/MS By MS/MS 1 1 14371000 5505900 8865000 2618 1680 2965 6765;6766 6627;6628;6629 6627 3 IINEPTAAAIAYGLDR IAGLNVLRIINEPTAA AIAYGLDRTGKGERNV R I I D R T 4 1 1 1 0 0 1 1 0 3 1 0 0 0 1 0 1 0 1 0 0 0 16 0 1686.8941 A0A0G2JIW1;P0DMV9;P0DMV8;P17066 A0A0G2JIW1 173 188 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 no no 2;3 0.0007923 123.26 By MS/MS By MS/MS 2 2 70447000 44707000 25740000 2619 351;1711 2966 6767;6768;6769;6770 6630;6631;6632;6633 6631 4 IINLGPVHPGPLSPEPQPMGVR CPRPYCKRIINLGPVH EPQPMGVRVICGHCKN R I I V R V 0 1 1 0 0 1 1 3 1 2 2 0 1 0 6 1 0 0 0 2 0 0 22 0 2304.2413 Q86T03 Q86T03 150 171 TMEM55B Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase yes yes 3 3.1903E-05 108.96 By MS/MS By MS/MS 1 1 56222000 24956000 31265000 2620 2396 2967 6771;6772 6634;6635;6636 6635 974 4890 3 IIPGFMCQGGDFTR YKGSCFHRIIPGFMCQ CQGGDFTRHNGTGGKS R I I T R H 0 1 0 1 1 1 0 3 0 2 0 0 1 2 1 0 1 0 0 0 0 0 14 0 1597.7381 P62937;F8WE65;C9J5S7;P0DN26;A0A0H2UH34;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284 P62937 56 69 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 2 0.0025868 92.866 By MS/MS By MS/MS 1 1 25210000 16300000 8910100 2621 1950 2968 6773;6774 6637;6638 6638 2 IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK TIGEILKKIIPTLEEG CLNYQHYKGSDFDCEL K I I Y K G 2 0 1 1 1 3 4 1 1 2 6 1 0 0 4 3 3 0 2 1 0 0 36 0 4054.0245 P61978 P61978 104 139 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 3;4 0.00081422 53.091 By MS/MS By MS/MS 2 2 636610000 199520000 437090000 2622 1931 2969 6775;6776;6777;6778 6639;6640;6641 6640 3727;3728;7500;7501 3 IIQLLDDYPK WKSNYFLKIIQLLDDY QLLDDYPKCFIVGADN K I I P K C 0 0 0 2 0 1 0 0 0 2 2 1 0 0 1 0 0 0 1 0 0 0 10 0 1216.6703 F8VWS0;Q8NHW5;P05388;F8VS58;F8VQY6;F8VRK7;G3V210;F8VZS0;F8VU65 F8VWS0 17 26 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2 0.0010503 114.4 By MS/MS By MS/MS 1 1 21914000 10706000 11208000 2623 1020 2970 6779;6780 6642;6643 6642 2 IISENSMDSAISDATSELEGK KLMFRRLKIISENSMD ATSELEGKDGKEDLDQ K I I G K D 2 0 1 2 0 0 3 1 0 3 1 1 1 0 0 5 1 0 0 0 0 0 21 0 2196.0104 H7C3H4;Q9BYW2 H7C3H4 1517 1537 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2;3 2.4086E-06 125.28 By MS/MS By MS/MS 2 3 60250000 29782000 30468000 2624 1284 2971;2972 6781;6782;6783;6784;6785 6644;6645;6646;6647 6644 462 2372;2373;2374 4 IISIFSGTEK EEKKPRHKIISIFSGT SIFSGTEKGSKKKEKE K I I E K G 0 0 0 0 0 0 1 1 0 3 0 1 0 1 0 2 1 0 0 0 0 0 10 0 1093.6019 Q13177 Q13177 53 62 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 2 1.9922E-05 152.67 By MS/MS By MS/MS 1 1 49901000 29000000 20901000 2625 2047 2973 6786;6787 6648;6649;6650 6648 4016 3 IISNASCTTNCLAPLAK EKYDNSLKIISNASCT NCLAPLAKVIHDNFGI K I I A K V 3 0 2 0 2 0 0 0 0 2 2 1 0 0 1 2 2 0 0 0 0 0 17 0 1832.9125 P04406;E7EUT5 P04406 146 162 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2;3 2.8476E-10 162.48 By MS/MS By MS/MS 2 4 131160000 65887000 65277000 2626 1635 2974;2975 6788;6789;6790;6791;6792;6793 6651;6652;6653;6654;6655;6656;6657;6658 6651 3086 8 IISPGSSTPSSTRSPPPGRDESYPR DTMSLLSKIISPGSST GRDESYPRELSNSVST K I I P R E 0 3 0 1 0 0 1 2 0 2 0 0 0 0 6 7 2 0 1 0 0 0 25 2 2627.294 Q5VT52 Q5VT52 756 780 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.0043974 63.606 By matching By MS/MS 1 1 14920000 8060700 6859100 2627 2264 2976 6794;6795 6659 6659 4538 1 IISTTASKTETPIVSK PHDVEINKIISTTASK TETPIVSKSLSSSLDD K I I S K S 1 0 0 0 0 0 1 0 0 3 0 2 0 0 1 3 4 0 0 1 0 0 16 1 1674.9404 O95292 O95292 140 155 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 3 0.0099844 70.26 By matching By MS/MS 1 1 15763000 10227000 5536300 2628 1588 2977 6796;6797 6660 6660 7356 0 IITLAGPTNAIFK SEGNCPERIITLAGPT GPTNAIFKAFAMIIDK R I I F K A 2 0 1 0 0 0 0 1 0 3 1 1 0 1 1 0 2 0 0 0 0 0 13 0 1357.7969 Q15366;H3BRU6;F8VZX2;F8W0G4;F8VXH9;F8W1G6 Q15366 58 70 PCBP2 Poly(rC)-binding protein 2 yes no 2 0.002975 91.855 By MS/MS By matching 1 1 8880600 4728300 4152300 2629 2134 2978 6798;6799 6661 6661 1 IITLTGPTNAIFK SEGNCPERIITLTGPT GPTNAIFKAFAMIIDK R I I F K A 1 0 1 0 0 0 0 1 0 3 1 1 0 1 1 0 3 0 0 0 0 0 13 0 1387.8075 Q15365 Q15365 58 70 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.0032056 104.22 By MS/MS By MS/MS 1 1 2730000 2730000 0 2630 2133 2979 6800;6801 6662;6663 6662 2 IIYDSDSESEETLQVK KQPSKKKRIIYDSDSE SEETLQVKNAKKPPEK R I I V K N 0 0 0 2 0 1 3 0 0 2 1 1 0 0 0 3 1 0 1 1 0 0 16 0 1854.8735 P35251;D6RAD2;E0CX09 P35251 65 80 RFC1 Replication factor C subunit 1 yes no 2 6.9607E-10 138.75 By MS/MS By MS/MS 5 10 99223000 33593000 65630000 2631 1793 2980 6802;6803;6804;6805;6806;6807;6808;6809;6810;6811;6812;6813;6814;6815;6816 6664;6665;6666;6667;6668;6669;6670;6671;6672;6673;6674;6675;6676;6677;6678 6672 3383;3384;3385;8256 15 IKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSK PAVPPGVRIKEEPVSE SPSGLHSKLANGLPLG R I K S K L 1 0 0 2 0 1 12 2 1 1 1 2 1 0 3 4 1 0 0 1 0 0 33 1 3699.5741 A0A0C4DH01;Q9NVU0 A0A0C4DH01 461 493 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes no 4 0.010089 41.303 By MS/MS 1 25941000 25941000 0 2632 329 2981 6817 6679 6679 130 582 1 IKEEVLSESEAENQQAGAAALAPEIVIK EASNKPVKIKEEVLSE LAPEIVIKVEKLDPEL K I K I K V 6 0 1 0 0 2 6 1 0 3 2 2 0 0 1 2 0 0 0 2 0 0 28 1 2936.5342 Q9UJX5 Q9UJX5 771 798 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 3 7.2333E-10 91.113 By MS/MS By MS/MS 1 1 109200000 49030000 60169000 2633 3014 2982 6818;6819 6680;6681;6682 6680 6343;6344 3 IKLQTPNTFPK AETPQAKKIKLQTPNT QTPNTFPKRKKGEKRA K I K P K R 0 0 1 0 0 1 0 0 0 1 1 2 0 1 2 0 2 0 0 0 0 0 11 1 1285.7394 A0A0A0MRM9;Q14978 A0A0A0MRM9 612 622 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.010806 79.639 By MS/MS By MS/MS 1 1 18025000 8128800 9896000 2634 222 2983 6820;6821 6683;6684 6683 6894;6895 2 IKNENTEGSPQEDGVELEGLK AEKKNKKKIKNENTEG GVELEGLKQRLEKKQK K I K L K Q 0 0 2 1 0 1 5 3 0 1 2 2 0 0 1 1 1 0 0 1 0 0 21 1 2285.1023 P11388 P11388 1239 1259 TOP2A DNA topoisomerase 2-alpha yes yes 3 8.9898E-05 91.618 By MS/MS By matching 1 1 138240000 80180000 58064000 2635 1682 2984 6822;6823 6685 6685 3174;7387 1 IKPSSSANAIYSLAAR GPECDHPKIKPSSSAN AIYSLAARPLPVPKLP K I K A R P 4 1 1 0 0 0 0 0 0 2 1 1 0 0 1 4 0 0 1 0 0 0 16 1 1647.8944 P22681;A0A0U1RR39;A0A1B0GW38;A0A0U1RQX8 P22681 664 679 CBL E3 ubiquitin-protein ligase CBL yes no 2 0.0007382 88.224 By MS/MS By MS/MS 2 2 37137000 18857000 18281000 2636 1751 2985;2986 6824;6825;6826;6827 6686;6687;6688 6688 3301;3302;3303;3304;8245 3 IKPSSSANAIYSLAARPLPVPK GPECDHPKIKPSSSAN ARPLPVPKLPPGEQCE K I K P K L 4 1 1 0 0 0 0 0 0 2 2 2 0 0 4 4 0 0 1 1 0 0 22 2 2279.3002 P22681;A0A0U1RR39;A0A1B0GW38;A0A0U1RQX8 P22681 664 685 CBL E3 ubiquitin-protein ligase CBL yes no 3 0.00098649 67.655 By MS/MS By MS/MS 2 1 115630000 62081000 53545000 2637 1751 2987;2988 6828;6829;6830 6689;6690;6691;6692 6690 3301;3302;3303;3304;8245 4 IKSPESVPVDSNK TQLGKECKIKSPESVP SVPVDSNKDCTTPLEM K I K N K D 0 0 1 1 0 0 1 0 0 1 0 2 0 0 2 3 0 0 0 2 0 0 13 1 1398.7355 A0A075B754;Q96QE3 A0A075B754 84 96 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.026353 69.314 By MS/MS 1 2056600 2056600 0 2638 18 2989 6831 6693 6693 31 1 IKSYDYEAWAK REENTKNRIKSYDYEA YDYEAWAKLDVDRILD R I K A K L 2 0 0 1 0 0 1 0 0 1 0 2 0 0 0 1 0 1 2 0 0 0 11 1 1372.6663 Q9H6T3 Q9H6T3 85 95 RPAP3 RNA polymerase II-associated protein 3 yes yes 2 0.025506 68.657 By MS/MS 1 0 0 0 2639 2844 2990 6832 6694 6694 5984 1 IKTEPSSPLSDPSDIIR ASPVTEVRIKTEPSSP SDPSDIIRVTVGDAAT R I K I R V 0 1 0 2 0 0 1 0 0 3 1 1 0 0 3 4 1 0 0 0 0 0 17 1 1853.9735 Q9ULJ3 Q9ULJ3 429 445 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2;3 0.0020679 86.016 By MS/MS By MS/MS 2 2 64403000 33497000 30906000 2640 3043 2991 6833;6834;6835;6836 6695;6696;6697;6698 6696 6412;6413 4 IKVSFLEIYNERVR ASLPSSCRIKVSFLEI EIYNERVRDLLKQSGQ R I K V R D 0 2 1 0 0 0 2 0 0 2 1 1 0 1 0 1 0 0 1 2 0 0 14 2 1764.9887 Q9P2P6 Q9P2P6 146 159 STARD9 StAR-related lipid transfer protein 9 yes yes 2 0.013307 60.398 By MS/MS 1 30185000 0 30185000 2641 2987 2992 6837 6699 6699 6285;8488 0 IKWDEQTSNTKGDDDEESDEEAVK FKRLMLHRIKWDEQTS ESDEEAVKKTNKCVLV R I K V K K 1 0 1 5 0 1 5 1 0 1 0 3 0 0 0 2 2 1 0 1 0 0 24 2 2767.1944 O43395 O43395 602 625 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 3 1.4251E-08 130.01 By matching By MS/MS 1 1 94103000 40384000 53719000 2642 1498 2993 6838;6839 6700 6700 2797 1 ILATDVSSKNTPDSK QAHEVHQKILATDVSS SKNTPDSKKISSRNIN K I L S K K 1 0 1 2 0 0 0 0 0 1 1 2 0 0 1 3 2 0 0 1 0 0 15 1 1574.8152 H0Y8J2;Q03188 H0Y8J2 27 41 CENPC Centromere protein C yes no 3 0.0036272 70.802 By MS/MS By MS/MS 1 1 18407000 9821000 8586000 2643 1148 2994 6840;6841 6701;6702 6701 2181;7203 2 ILDPNTGEPAPVLSSPPPADVSTFLAFPSPEK KSATPSRKILDPNTGE LAFPSPEKLLRLGPKS K I L E K L 3 0 1 2 0 0 2 1 0 1 3 1 0 2 8 4 2 0 0 2 0 0 32 0 3289.6758 P46060 P46060 414 445 RANGAP1 Ran GTPase-activating protein 1 yes yes 3 0.00023079 60.234 By MS/MS By MS/MS 1 1 78493000 49497000 28996000 2644 1835 2995 6842;6843 6703;6704 6704 3469;3470 2 ILDSVGIEADDDR PSAKDIKKILDSVGIE GIEADDDRLNKVISEL K I L D R L 1 1 0 4 0 0 1 1 0 2 1 0 0 0 0 1 0 0 0 1 0 0 13 0 1416.6733 P05387 P05387 26 38 RPLP2 60S acidic ribosomal protein P2 yes yes 2 0.0023215 94.767 By matching By MS/MS 1 1 14787000 8787000 6000300 2645 1641 2996 6844;6845 6705 6705 1 ILDSVGIEADDDRLNK PSAKDIKKILDSVGIE ADDDRLNKVISELNGK K I L N K V 1 1 1 4 0 0 1 1 0 2 2 1 0 0 0 1 0 0 0 1 0 0 16 1 1771.8952 P05387 P05387 26 41 RPLP2 60S acidic ribosomal protein P2 yes yes 3 0.00012142 116.79 By MS/MS By MS/MS 1 1 33452000 14535000 18917000 2646 1641 2997 6846;6847 6706;6707 6707 2 ILEDHGSPAGEIDDEDKDKDETETVK SCAKEAKRILEDHGSP KDETETVKQTQTSEVY R I L V K Q 1 0 0 6 0 0 5 2 1 2 1 3 0 0 1 1 2 0 0 1 0 0 26 2 2884.3098 A6NNN6;E7ETA6;Q15154;H0YBA1 A6NNN6 1670 1695 PCM1 Pericentriolar material 1 protein yes no 3 0.012739 55.631 By matching By MS/MS 1 1 19965000 9197000 10768000 2647 484 2998 6848;6849 6708 6708 874 1 ILEGDNGMDSDMEEEADDGSK LSEKKILKILEGDNGM EEADDGSKMGSDLVSQ K I L S K M 1 0 1 5 0 0 4 3 0 1 1 1 2 0 0 2 0 0 0 0 0 0 21 0 2255.8682 Q9H8G2 Q9H8G2 194 214 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 2 0.0036084 72.916 By MS/MS 1 0 0 0 2648 2854 2999 6850 6709 6709 1133 6015 1 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR SAPQGTLRILEGPQQS IPPGLRPRFCAFGGNP R I L P R F 1 2 0 0 0 4 1 3 0 3 4 0 0 0 10 4 0 0 0 0 0 0 32 1 3323.8354 O15446 O15446 117 148 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 3 1.3078E-08 85.849 By MS/MS By MS/MS 3 3 112030000 58504000 53527000 2649 1483 3000;3001 6851;6852;6853;6854;6855;6856 6710;6711;6712;6713;6714 6714 2769;2770;2771;2772 5 ILELDQFK LDNPGAKRILELDQFK ILELDQFKGQQGQKRF R I L F K G 0 0 0 1 0 1 1 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 8 0 1004.5542 B1AHC9;P12956 B1AHC9 66 73 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.01076 127.84 By MS/MS By MS/MS 1 1 7165900 3361700 3804200 2650 518 3002 6857;6858 6715;6716 6715 2 ILELTPEPDRPR LIQHQDMRILELTPEP TPEPDRPRILPPDQRP R I L P R I 0 2 0 1 0 0 2 0 0 1 2 0 0 0 3 0 1 0 0 0 0 0 12 1 1434.7831 Q14004 Q14004 1242 1253 CDK13 Cyclin-dependent kinase 13 yes yes 2 0.030101 91.858 By MS/MS By matching 1 1 111540000 70359000 41179000 2651 2080 3003 6859;6860 6717 6717 1 ILEPDDFLDDLDDEDYEEDTPK TNSRARKRILEPDDFL DYEEDTPKRRGKGKSK R I L P K R 0 0 0 8 0 0 4 0 0 1 3 1 0 1 2 0 1 0 1 0 0 0 22 0 2640.1126 J3KMZ8;Q92785 J3KMZ8 157 178 DPF2 Zinc finger protein ubi-d4 yes no 2 5.5403E-11 136.67 By MS/MS By MS/MS 1 1 101750000 88115000 13636000 2652 1316 3004 6861;6862 6718;6719 6718 7246;8164 2 ILEQQNSSRTLEK ANWEAQQRILEQQNSS NSSRTLEKNKKKGKIF R I L E K N 0 1 1 0 0 2 2 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 13 1 1544.8158 Q5JXL7;G3V1Q4;E7ES33;E7EPK1;Q16181 Q5JXL7 68 80 DKFZp586I031;SEPT7 Septin-7 yes no 2;3 1.1462E-44 197.7 By MS/MS By MS/MS 3 3 419020000 278060000 140960000 2653 800 3005;3006 6863;6864;6865;6866;6867;6868 6720;6721;6722;6723;6724;6725 6723 29 7070 6 ILGETSLMR ITDFGHSKILGETSLM LGETSLMRTLCGTPTY K I L M R T 0 1 0 0 0 0 1 1 0 1 2 0 1 0 0 1 1 0 0 0 0 0 9 0 1018.5481 H0Y820;O96017 H0Y820 118 126 CHEK2 Serine/threonine-protein kinase Chk2 yes no 2 0.011351 76.332 By MS/MS By matching 1 1 5921900 2647400 3274500 2654 1143 3007 6869;6870 6726 6726 2172 1 ILIPSDIESSK HKQTKKRRILIPSDIE PSDIESSKSSTRRMKS R I L S K S 0 0 0 1 0 0 1 0 0 3 1 1 0 0 1 3 0 0 0 0 0 0 11 0 1200.6602 A0A087WYW3;P30414 A0A087WYW3 159 169 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.001868 99.844 By MS/MS By MS/MS 1 1 43921000 24264000 19657000 2655 130 3008 6871;6872 6727;6728;6729 6728 217 3 ILKPGSTALKTPTAVVAPVEK SGLKAPTKILKPGSTA AVVAPVEKTISSEKAS K I L E K T 3 0 0 0 0 0 1 1 0 1 2 3 0 0 3 1 3 0 0 3 0 0 21 2 2119.2616 F5H6A0;J3KP58;P30622;F5H1T5;F6VGP8;F5H367;F5H270 F5H6A0 15 35 CLIP1 CAP-Gly domain-containing linker protein 1 yes no 3 0.030908 40.432 By MS/MS 1 1489800 1489800 0 2656 981 3009 6873 6730 6730 0 ILKSPEIQR MINTDLSRILKSPEIQ LKSPEIQRALRAPRKK R I L Q R A 0 1 0 0 0 1 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1082.6448 H3BM89;P36578 H3BM89 198 206 RPL4 60S ribosomal protein L4 yes no 2;3 0.00144 104.01 By MS/MS By MS/MS 2 2 212640000 113400000 99243000 2657 1225 3010 6874;6875;6876;6877 6731;6732;6733 6733 2287 3 ILLAELEQLK RFLEQQNKILLAELEQ LAELEQLKGQGKSRLG K I L L K G 1 0 0 0 0 1 2 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 10 0 1168.7067 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5 P08670 130 139 VIM Vimentin yes no 2 2.506E-16 175.91 By MS/MS By MS/MS 1 1 36984000 19308000 17676000 2658 1663 3011 6878;6879 6734;6735 6734 2 ILLAELEQLKGQGK RFLEQQNKILLAELEQ EQLKGQGKSRLGDLYE K I L G K S 1 0 0 0 0 2 2 2 0 1 4 2 0 0 0 0 0 0 0 0 0 0 14 1 1538.9032 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5 P08670 130 143 VIM Vimentin yes no 3 0.00028024 149.41 By MS/MS By MS/MS 1 1 16914000 8453800 8460500 2659 1663 3012 6880;6881 6736;6737 6737 2 ILLSQTTGVAIPLHASSLDDVSLASTPK VRQRDMYRILLSQTTG VSLASTPKRPSTSQTV R I L P K R 3 0 0 2 0 1 0 1 1 2 5 1 0 0 2 5 3 0 0 2 0 0 28 0 2833.5437 P12270 P12270 616 643 TPR Nucleoprotein TPR yes yes 3 5.1111E-14 128.36 By MS/MS By MS/MS 1 1 22455000 15327000 7128500 2660 1686 3013 6882;6883 6738;6739 6739 3184;7390 2 ILLVDSPGMGNADDEQQEEGTSSK KPTHEDSKILLVDSPG QEEGTSSKQVVKQGLQ K I L S K Q 1 0 1 3 0 2 3 3 0 1 2 1 1 0 1 3 1 0 0 1 0 0 24 0 2519.1333 Q9UKN8 Q9UKN8 606 629 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 2;3 2.5644E-06 114.87 By MS/MS By MS/MS 2 3 239910000 127970000 111940000 2661 3028 3014;3015 6884;6885;6886;6887;6888 6740;6741;6742;6743;6744;6745;6746;6747 6746 1204 6383 8 ILMQYQARLEQSEK SQEEQTSKILMQYQAR ARLEQSEKRLRQQQAE K I L E K R 1 1 0 0 0 3 2 0 0 1 2 1 1 0 0 1 0 0 1 0 0 0 14 1 1735.8927 A0A0A0MQZ2;B7ZCA0;Q96PV0 A0A0A0MQZ2 1218 1231 SYNGAP1 Ras/Rap GTPase-activating protein SynGAP yes no 3 0.021103 58.04 By MS/MS 1 0 0 0 2662 193 3016 6889 6748 6748 344 1 ILNNGHAFNVEFDDSQDK YDQATSLRILNNGHAF EFDDSQDKAASLGSLE R I L D K A 1 0 3 3 0 1 1 1 1 1 1 1 0 2 0 1 0 0 0 1 0 0 18 0 2061.9392 E5RID5;E5RK37;P00918 E5RID5 59 76 CA2 Carbonic anhydrase 2 yes no 3 0.0052648 79.311 By MS/MS By matching 2 1 13852000 9662000 4190000 2663 784 3017;3018 6890;6891;6892 6749;6750 6750 1 ILPGSMIVSSDDTVDSTIDR SASFSDVRILPGSMIV TVDSTIDREGKPGGTV R I L D R E 0 1 0 4 0 0 0 1 0 3 1 0 1 0 1 4 2 0 0 2 0 0 20 0 2120.0307 Q9UK59 Q9UK59 470 489 DBR1 Lariat debranching enzyme yes yes 2 0.0031126 62.589 By MS/MS By MS/MS 1 1 17130000 8394700 8735400 2664 3018 3019 6893;6894 6751;6752;6753 6751 1201 6354;6355 3 ILRLSTFEK MAFANFRRILRLSTFE LRLSTFEKRKSREYEH R I L E K R 0 1 0 0 0 0 1 0 0 1 2 1 0 1 0 1 1 0 0 0 0 0 9 1 1105.6495 O94804 O94804 9 17 STK10 Serine/threonine-protein kinase 10 yes yes 2 0.0011162 117.95 By MS/MS By MS/MS 2 2 60585000 32814000 27771000 2665 1567 3020;3021 6895;6896;6897;6898 6754;6755;6756 6755 2967;7348 3 ILSDVTHSAVFGVPASK TQRAGHRRILSDVTHS VFGVPASKSTQLLQAA R I L S K S 2 0 0 1 0 0 0 1 1 1 1 1 0 1 1 3 1 0 0 3 0 0 17 0 1726.9254 E9PG46;Q2M2I8 E9PG46 635 651 AAK1 AP2-associated protein kinase 1 yes no 2;3 4.7811E-53 190.18 By MS/MS By MS/MS 2 2 129280000 61632000 67651000 2666 869 3022 6899;6900;6901;6902 6757;6758;6759;6760;6761 6761 1598 5 ILSISADIETIGEILKK PDSSGPERILSISADI TIGEILKKIIPTLEEG R I L K K I 1 0 0 1 0 0 2 1 0 5 2 2 0 0 0 2 1 0 0 0 0 0 17 1 1842.0714 P61978;Q5T6W2 P61978 87 103 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 3.415E-16 146.27 By MS/MS 1 5179500 5179500 0 2667 1931 3023 6903 6762 6762 1 ILSNEYEEKYDLSR PKKKAQDKILSNEYEE EEKYDLSRPTASQLED K I L S R P 0 1 1 1 0 0 3 0 0 1 2 1 0 0 0 2 0 0 2 0 0 0 14 1 1757.8472 Q76M96 Q76M96 501 514 CCDC80 Coiled-coil domain-containing protein 80 yes yes 2 0.028279 53.255 By MS/MS 1 0 0 0 2668 2362 3024 6904 6763 6763 4784;4785 1 ILSPDSFIK IAHEIYQKILSPDSFI LSPDSFIKDNYGLNQD K I L I K D 0 0 0 1 0 0 0 0 0 2 1 1 0 1 1 2 0 0 0 0 0 0 9 0 1018.5699 Q8IZT6 Q8IZT6 365 373 ASPM Abnormal spindle-like microcephaly-associated protein yes yes 2 0.0061407 100.88 By MS/MS By MS/MS 1 1 3332300 3332300 0 2669 2450 3025 6905;6906 6764;6765 6764 5005 2 ILSQSTDSLNMR ESPLGLRRILSQSTDS STDSLNMRNRTLSVES R I L M R N 0 1 1 1 0 1 0 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 12 0 1363.6766 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 215 226 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 8.2922E-10 136.93 By MS/MS By MS/MS 4 4 143480000 66071000 77405000 2670 2613 3026;3027 6907;6908;6909;6910;6911;6912;6913;6914 6766;6767;6768;6769;6770;6771;6772;6773 6768 1047 5372;5373 8 ILTEAEIDAHLVALAERD TVENPKFRILTEAEID LVALAERD________ R I L R D - 4 1 0 2 0 0 3 0 1 2 3 0 0 0 0 0 1 0 0 1 0 0 18 1 1978.0371 H0YJC4;G3V5Z7;P60900 H0YJC4 68 85 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 yes no 3 0.00073521 125.98 By MS/MS By matching 1 1 13673000 9943500 3729800 2671 1088 3028 6915;6916 6774 6774 1 ILTFDQLALDSPK RILRAGGKILTFDQLA QLALDSPKGCGTVLLS K I L P K G 1 0 0 2 0 1 0 0 0 1 3 1 0 1 1 1 1 0 0 0 0 0 13 0 1459.7922 F8VUA6;G3V203;H0YHA7;J3QQ67;Q07020 F8VUA6 68 80 RPL18 60S ribosomal protein L18 yes no 2 2.9757E-19 167.12 By MS/MS By MS/MS 1 1 21678000 14923000 6755100 2672 1012 3029 6917;6918 6775;6776 6775 2 ILVATNLFGR QFKDFQRRILVATNLF VATNLFGRGMDIERVN R I L G R G 1 1 1 0 0 0 0 1 0 1 2 0 0 1 0 0 1 0 0 1 0 0 10 0 1102.6499 A0A140T9X3;A0A0G2JJZ9;Q5STU3;O00148;Q13838;H0Y400 A0A140T9X3 240 249 DDX39B;DDX39A ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.0033034 109.11 By MS/MS By MS/MS 1 1 6071300 4180600 1890700 2673 352 3030 6919;6920 6777;6778 6777 2 ILVPKSPVK DLAKSGIKILVPKSPV LVPKSPVKSRTAVDGF K I L V K S 0 0 0 0 0 0 0 0 0 1 1 2 0 0 2 1 0 0 0 2 0 0 9 1 979.643 Q9Y232 Q9Y232 196 204 CDYL Chromodomain Y-like protein yes yes 3 0.0034974 77.387 By MS/MS By matching 1 1 10359000 5466700 4892600 2674 3082 3031 6921;6922 6779 6779 6623 1 ILYSQCGDVMR FDRTGDGKILYSQCGD SQCGDVMRALGQNPTN K I L M R A 0 1 0 1 1 1 0 1 0 1 1 0 1 0 0 1 0 0 1 1 0 0 11 0 1340.6217 G8JLA2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;F8VPF3;F8W1I5;P14649 G8JLA2 28 38 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B yes no 2 0.022109 59.931 By matching By MS/MS 1 2 8247000 3112300 5134700 2675 1107 3032 6923;6924;6925 6780;6781 6780 395 0 IMATPEQVGK RKMPFTEKIMATPEQV ATPEQVGKMKAIVEKL K I M G K M 1 0 0 0 0 1 1 1 0 1 0 1 1 0 1 0 1 0 0 1 0 0 10 0 1072.5587 B1AHC9;P12956 B1AHC9 402 411 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.0040574 81.676 By MS/MS 1 33181000 33181000 0 2676 518 3033 6926 6782 6782 205 6981 1 IMGPNYTPGKK VSTGLKVRIMGPNYTP PNYTPGKKEDLYLKPI R I M K K E 0 0 1 0 0 0 0 2 0 1 0 2 1 0 2 0 1 0 1 0 0 0 11 1 1204.6274 P13639 P13639 429 439 EEF2 Elongation factor 2 yes yes 3 0.020255 56.29 By MS/MS 1 5240100 5240100 0 2677 1693 3034 6927 6783 6783 631 1 IMNTFSVVPSPK IREEYPDRIMNTFSVV FSVVPSPKVSDTVVEP R I M P K V 0 0 1 0 0 0 0 0 0 1 0 1 1 1 2 2 1 0 0 2 0 0 12 0 1318.6955 Q5JP53;P07437;Q5ST81;A0A0B4J269;Q13509;G3V2A3;M0R2D3;M0R042;M0QYM7;P68371;P04350 Q5JP53 145 156 TUBB;TUBB3;TUBB4A;TUBB4B Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 2 0.003389 92.538 By MS/MS By matching 1 1 4256400 3372500 883850 2678 1653;1958 3035 6928;6929 6784 6784 606 1 IMNVIGEPIDER VGPETLGRIMNVIGEP IGEPIDERGPIKTKQF R I M E R G 0 1 1 1 0 0 2 1 0 3 0 0 1 0 1 0 0 0 0 1 0 0 12 0 1384.7021 H0YH81;P06576;F8W079 H0YH81 81 92 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 2 0.0082879 84.31 By matching By MS/MS 1 1 14063000 7562900 6499700 2679 1184 3036 6930;6931 6785 6785 429 1 IMSCSPDTQCSR LLKKQVVRIMSCSPDT SPDTQCSRDHSMEDPD R I M S R D 0 1 0 1 2 1 0 0 0 1 0 0 1 0 1 3 1 0 0 0 0 0 12 0 1440.5796 Q9C0C9;K7EQ12 Q9C0C9 397 408 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 2 0.00092464 97.631 By MS/MS By matching 1 1 14700000 8223900 6476400 2680 2792 3037 6932;6933 6786 6786 5831 1 IMVGSTDDPSVFSLPDSK HAPGKEHKIMVGSTDD VFSLPDSKLPGDKEFV K I M S K L 0 0 0 3 0 0 0 1 0 1 1 1 1 1 2 4 1 0 0 2 0 0 18 0 1893.903 O43741 O43741 35 52 PRKAB2 5-AMP-activated protein kinase subunit beta-2 yes yes 2 2.4054E-07 133.32 By MS/MS By MS/MS 2 1 30298000 26472000 3825700 2681 1506 3038;3039 6934;6935;6936 6787;6788;6789 6787 544 2830;7317 3 INEILSNALK GSGMNMGRINEILSNA EILSNALKRGEIIAKQ R I N L K R 1 0 2 0 0 0 1 0 0 2 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1113.6394 A0A087X0X3;P52272;M0R019 A0A087X0X3 372 381 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.0013345 131.5 By MS/MS By MS/MS 1 1 7562900 4412900 3150100 2682 163 3040 6937;6938 6790;6791 6791 2 INFSDLDQR ELEKLKQRINFSDLDQ NFSDLDQRSIGSDSQG R I N Q R S 0 1 1 2 0 1 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1106.5356 A6NNN6;E7ETA6;Q15154;E5RGQ4;E9PGW9;E7EV93 A6NNN6 107 115 PCM1 Pericentriolar material 1 protein yes no 2 0.0010269 114.76 By MS/MS By MS/MS 1 1 19088000 10781000 8306800 2683 484 3041 6939;6940 6792;6793 6792 875 2 INHTVILDDPFDDPPDLLIPDRSPEPTR FVPYQDIRINHTVILD DRSPEPTREQLDSGRI R I N T R E 0 2 1 6 0 0 1 0 1 3 3 0 0 1 6 1 2 0 0 1 0 0 28 1 3196.6041 Q8WUA2 Q8WUA2 156 183 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 3;4 2.5182E-72 190.3 By MS/MS By MS/MS 1 2 770530000 345340000 425190000 2684 2552 3042 6941;6942;6943 6794;6795;6796 6795 5212 3 INHTVILDDPFDDPPDLLIPDRSPEPTREQLDSGR FVPYQDIRINHTVILD REQLDSGRIGADEEID R I N G R I 0 3 1 7 0 1 2 1 1 3 4 0 0 1 6 2 2 0 0 1 0 0 35 2 3981.9708 Q8WUA2 Q8WUA2 156 190 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 4 1.1645E-09 86.434 By MS/MS By MS/MS 1 1 120300000 69419000 50881000 2685 2552 3043 6944;6945 6797;6798 6797 5212 2 INKTSPVTASDPAGPSYAAATLQASSAASSASPVSR PGALFFSRINKTSPVT SSASPVSRAIGSTSKP R I N S R A 9 1 1 1 0 1 0 1 0 1 1 1 0 0 4 9 3 0 1 2 0 0 36 1 3417.7012 F5H8D7;P18887;M0QYS5;M0R1U8 F5H8D7 164 199 XRCC1 DNA repair protein XRCC1 yes no 3 4.8274E-05 63.625 By MS/MS 1 20797000 20797000 0 2686 988 3044 6946 6799 6799 1857;1858;7143;7144 1 INLNESMQVVSR TVNGRLLKINLNESMQ ESMQVVSRRVVTVAYG K I N S R R 0 1 2 0 0 1 1 0 0 1 1 0 1 0 0 2 0 0 0 2 0 0 12 0 1388.7082 H0YA64;Q9Y4D7 H0YA64 60 71 PLXND1 Plexin-D1 yes no 2 0.023914 51.939 By MS/MS 1 0 0 0 2687 1156 3045 6947 6800 6800 418 2196;2197 1 INPPSSGGTSSSPIK NRRQKEKRINPPSSGG GTSSSPIKAIFPSPTS R I N I K A 0 0 1 0 0 0 0 2 0 2 0 1 0 0 3 5 1 0 0 0 0 0 15 0 1427.7256 A0A0C4DG88;P14859;A0A0A0MT46 A0A0C4DG88 345 359 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 2 0.00083227 106.76 By MS/MS By MS/MS 1 1 84748000 42619000 42129000 2688 309 3046 6948;6949 6801;6802;6803 6803 538;539;540 3 INPYMSSPCHIEMILTEK RTYRAHGRINPYMSSP IEMILTEKEQIVPKPE R I N E K E 0 0 1 0 1 0 2 0 1 3 1 1 2 0 2 2 1 0 1 0 0 0 18 0 2162.021 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A0A0MRF8;A0A0A6YYL6;P18621 A0A087WXM6 136 153 RPL17;RPL17-C18orf32 60S ribosomal protein L17 yes no 3 0.010412 55.011 By MS/MS By MS/MS 2 1 23359000 15902000 7457200 2689 110 3047;3048 6950;6951;6952 6804;6805;6806;6807 6804 41;42 191;192 3 INSDDSNLYLTASK RRIGDVVRINSDDSNL NLYLTASKKKPTCC__ R I N S K K 1 0 2 2 0 0 0 0 0 1 2 1 0 0 0 3 1 0 1 0 0 0 14 0 1539.7417 C9JY26;Q9BZG1 C9JY26 239 252 RAB34 Ras-related protein Rab-34 yes no 2 6.1575E-16 148.78 By MS/MS By MS/MS 2 1 21203000 16802000 4401300 2690 701 3049 6953;6954;6955 6808;6809;6810 6808 1298;8100 3 INSLLEYSR PVRQSVRRINSLLEYS NSLLEYSRQPTGHKLA R I N S R Q 0 1 1 0 0 0 1 0 0 1 2 0 0 0 0 2 0 0 1 0 0 0 9 0 1093.5768 Q6P4F7 Q6P4F7 845 853 ARHGAP11A Rho GTPase-activating protein 11A yes yes 2 0.0043755 96.067 By MS/MS By MS/MS 1 1 19170000 10472000 8698100 2691 2320 3050 6956;6957 6811;6812;6813 6813 4680 3 INSLTFKK KGKKAFERINSLTFKK INSLTFKKSLDMKARL R I N K K S 0 0 1 0 0 0 0 0 0 1 1 2 0 1 0 1 1 0 0 0 0 0 8 1 949.55967 Q96HP0;K7ESB7 Q96HP0 1306 1313 DOCK6 Dedicator of cytokinesis protein 6 yes no 2 0.010665 101.66 By MS/MS By MS/MS 1 1 4113300 4113300 0 2692 2664 3051 6958;6959 6814;6815 6814 5493 2 INVCYQEELEAMMTK DMLILQRKINVCYQEE ELEAMMTKADNDNRDH K I N T K A 1 0 1 0 1 1 3 0 0 1 1 1 2 0 0 0 1 0 1 1 0 0 15 0 1857.8311 G3V3F7;Q96KN7;H0YIY1;G3V236 G3V3F7 505 519 RPGRIP1 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 yes no 3 0.032072 40.186 By MS/MS 1 0 0 0 2693 1075 3052 6960 6816 6816 1 INWASFR SPRRWRPKINWASFRR KINWASFRRRRKEQTA K I N F R R 1 1 1 0 0 0 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 7 0 892.45554 Q9H0W5 Q9H0W5 269 275 CCDC8 Coiled-coil domain-containing protein 8 yes yes 2 0.023349 101.46 By MS/MS By MS/MS 1 1 38277000 22370000 15907000 2694 2807 3053 6961;6962 6817;6818;6819 6818 5872 3 IPAKLSPTQLR SGQETFWRIPAKLSPT KLSPTQLRRAAASLSQ R I P L R R 1 1 0 0 0 1 0 0 0 1 2 1 0 0 2 1 1 0 0 0 0 0 11 1 1222.7398 Q9UNS1 Q9UNS1 1082 1092 TIMELESS Protein timeless homolog yes yes 3 0.0058115 67.102 By MS/MS By MS/MS 1 1 8348500 3942600 4405900 2695 3061 3054 6963;6964 6820;6821 6820 6460 2 IPDWFLNR MQNPRQYKIPDWFLNR IPDWFLNRQKDVKDGK K I P N R Q 0 1 1 1 0 0 0 0 0 1 1 0 0 1 1 0 0 1 0 0 0 0 8 0 1059.5502 P62269;J3JS69 P62269 79 86 RPS18 40S ribosomal protein S18 yes no 2 0.02241 90.777 By MS/MS By MS/MS 1 1 9012000 5568800 3443200 2696 1939 3055 6965;6966 6822;6823 6822 2 IPFDRDKDLK DKNKPQERIPFDRDKD FDRDKDLKVNRFDEAQ R I P L K V 0 1 0 3 0 0 0 0 0 1 1 2 0 1 1 0 0 0 0 0 0 0 10 2 1245.6717 A0A0A0MRI1;Q8IXQ4 A0A0A0MRI1 297 306 GPALPP1 GPALPP motifs-containing protein 1 yes no 2 0.014482 66.27 By matching By MS/MS 1 1 3942700 1836900 2105800 2697 216 3056 6967;6968 6824 6824 0 IPGGNIYISPLKSPYK KFPSSPLRIPGGNIYI SPLKSPYKISEGLPTP R I P Y K I 0 0 1 0 0 0 0 2 0 3 1 2 0 0 3 2 0 0 2 0 0 0 16 1 1745.9716 P06400 P06400 799 814 RB1 Retinoblastoma-associated protein yes yes 2;3 7.0338E-05 122.97 By MS/MS By MS/MS 5 7 97209000 40520000 56690000 2698 1645 3057;3058 6969;6970;6971;6972;6973;6974;6975;6976;6977;6978;6979;6980 6825;6826;6827;6828;6829;6830;6831;6832;6833;6834;6835;6836;6837;6838 6827 3103;3104;8219;8220 13 IPGTPGAGGRLSPENNQVLTK ANSTAVVKIPGTPGAG ENNQVLTKKKLQDLVR K I P T K K 1 1 2 0 0 1 1 4 0 1 2 1 0 0 3 1 2 0 0 1 0 0 21 1 2105.1229 Q16514 Q16514 40 60 TAF12 Transcription initiation factor TFIID subunit 12 yes yes 3 0.0067261 56.799 By MS/MS By MS/MS 1 1 99455000 47143000 52312000 2699 2164 3059 6981;6982 6839;6840 6840 4307 2 IPLIKSHNDFVAILDLPEGEHQYK SFNNWSTKIPLIKSHN PEGEHQYKFFVDGQWV K I P Y K F 1 0 1 2 0 1 2 1 2 3 3 2 0 1 2 1 0 0 1 1 0 0 24 1 2775.4596 O43741 O43741 103 126 PRKAB2 5-AMP-activated protein kinase subunit beta-2 yes yes 4 5.0108E-06 87.496 By MS/MS By MS/MS 1 1 15507000 7731500 7775600 2700 1506 3060 6983;6984 6841;6842 6842 2831 2 IPLPGAEMLEEEPLYVNAK GSVPAIQRIPLPGAEM EPLYVNAKQYHRILKR R I P A K Q 2 0 1 0 0 0 4 1 0 1 3 1 1 0 3 0 0 0 1 1 0 0 19 0 2112.0813 P23511 P23511 252 270 NFYA Nuclear transcription factor Y subunit alpha yes yes 2 0.025551 48.277 By matching By MS/MS 1 1 12985000 6563900 6421500 2701 1757 3061 6985;6986 6843 6843 661 0 IPMTPTSSFVSPPPPTASPHSNR STSTEGLKIPMTPTSS TASPHSNRTTPPEAAQ K I P N R T 1 1 1 0 0 0 0 0 1 1 0 0 1 1 7 5 3 0 0 1 0 0 23 0 2404.1845 Q7Z5L9 Q7Z5L9 389 411 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.0017576 61.89 By MS/MS By MS/MS 2 1 35004000 22759000 12245000 2702 2391 3062;3063 6987;6988;6989 6844;6845;6846;6847;6848 6847 965 4864;4865 5 IPNSYEVLFPESPAR VAELLSMKIPNSYEVL LFPESPARAGTEPKKG K I P A R A 1 1 1 0 0 0 2 0 0 1 1 0 0 1 3 2 0 0 1 1 0 0 15 0 1717.8675 O14686 O14686 4811 4825 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.0028137 83.891 By MS/MS By matching 1 1 15870000 9175300 6694500 2703 1454 3064 6990;6991 6849 6849 2697 1 IPNYQLSPTKLPSINK SNTLAKMRIPNYQLSP TKLPSINKSKDRASQQ R I P N K S 0 0 2 0 0 1 0 0 0 2 2 2 0 0 3 2 1 0 1 0 0 0 16 1 1812.0145 A0A0C4DG07;O60934 A0A0C4DG07 344 359 NBN Nibrin yes no 2;3 1.0966E-41 175.7 By MS/MS By MS/MS 2 2 162530000 72702000 89826000 2704 304 3065 6992;6993;6994;6995 6850;6851;6852;6853 6851 531 4 IPQDGDYEFLK LKNSSDWKIPQDGDYE DGDYEFLKSWTVEDLQ K I P L K S 0 0 0 2 0 1 1 1 0 1 1 1 0 1 1 0 0 0 1 0 0 0 11 0 1323.6347 F5H5B4;Q13043 F5H5B4 372 382 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit yes no 2 0.0035503 63.283 By MS/MS By matching 2 1 18538000 12234000 6303800 2705 975 3066 6996;6997;6998 6854;6855 6855 8135 0 IPRPLSPTK QENHENERIPRPLSPT PRPLSPTKLLPFLSNP R I P T K L 0 1 0 0 0 0 0 0 0 1 1 1 0 0 3 1 1 0 0 0 0 0 9 1 1007.6128 Q13625 Q13625 693 701 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 3 0.026968 47.96 By matching By MS/MS 1 1 5921800 3137400 2784400 2706 2073 3067 6999;7000 6856 6856 4089 1 IPSEMPSPNFGK DTSLIHGKIPSEMPSP MPSPNFGKNIYRKQSG K I P G K N 0 0 1 0 0 0 1 1 0 1 0 1 1 1 3 2 0 0 0 0 0 0 12 0 1302.6278 Q9H2J7 Q9H2J7 681 692 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 7.7069E-05 122.1 By MS/MS By MS/MS 2 3 166360000 75678000 90685000 2707 2819 3068;3069 7001;7002;7003;7004;7005 6857;6858;6859;6860;6861;6862;6863;6864;6865 6860 1120 5904 9 IPSIVSSPLNSPLDR SPLADAKRIPSIVSSP PLNSPLDRSGIDITDF R I P D R S 0 1 1 1 0 0 0 0 0 2 2 0 0 0 3 4 0 0 0 1 0 0 15 0 1593.8726 P49790 P49790 328 342 NUP153 Nuclear pore complex protein Nup153 yes yes 2 2.0046E-112 233.48 By MS/MS By MS/MS 3 3 157790000 83746000 74043000 2708 1859 3070;3071 7006;7007;7008;7009;7010;7011 6866;6867;6868;6869;6870;6871 6871 3588;3589;3590 6 IPSPNILK SPNPRSVRIPSPNILK IPSPNILKTGLTENVD R I P L K T 0 0 1 0 0 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 0 0 8 0 880.5382 Q5VUA4 Q5VUA4 2099 2106 ZNF318 Zinc finger protein 318 yes yes 2 0.012784 82.029 By MS/MS By MS/MS 1 1 28540000 15533000 13007000 2709 2268 3072 7012;7013 6872;6873;6874;6875 6875 4555 4 IPSQPPPVPAK AEQRMQPKIPSQPPPV QPPPVPAKKSRERLAN K I P A K K 1 0 0 0 0 1 0 0 0 1 0 1 0 0 5 1 0 0 0 1 0 0 11 0 1129.6495 O94885;A0A087WW74 O94885 980 990 SASH1 SAM and SH3 domain-containing protein 1 yes no 2 0.025331 61.213 By MS/MS 1 5132000 0 5132000 2710 1573 3073 7014 6876 6876 2981 1 IPVEGPLSPSR GNNPIFPRIPVEGPLS EGPLSPSRGDFPKGIP R I P S R G 0 1 0 0 0 0 1 1 0 1 1 0 0 0 3 2 0 0 0 1 0 0 11 0 1150.6346 O00512 O00512 680 690 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 0.0098612 74.537 By MS/MS By MS/MS 1 1 32049000 17902000 14147000 2711 1441 3074 7015;7016 6877;6878 6877 2643 2 IPVNSQPVSMAENGNCEMKQMLPK QHMKSLGKIPVNSQPV EMKQMLPKLEWTEELE K I P P K L 1 0 3 0 1 2 2 1 0 1 1 2 3 0 3 2 0 0 0 2 0 0 24 1 2701.2696 H0YLX4;H0YKE0;Q3MJ13 H0YLX4 1004 1027 WDR72 WD repeat-containing protein 72 yes no 3 0.025966 47.75 By MS/MS By matching 1 1 20092000 10586000 9505400 2712 1200 3075 7017;7018 6879 6879 438 2242;2243 0 IPYPGRSPQDLASTSR SDSARGIRIPYPGRSP QDLASTSRAREGLRNM R I P S R A 1 2 0 1 0 1 0 1 0 1 1 0 0 0 3 3 1 0 1 0 0 0 16 1 1743.8904 Q9HC52;C9JM54;C9J6K3 Q9HC52 104 119 CBX8 Chromobox protein homolog 8 yes no 3 0.0084692 69.456 By MS/MS By MS/MS 1 1 14814000 7302500 7511100 2713 2871 3076 7019;7020 6880;6881 6880 6041 1 IQAAASTPTNATAASDANTGDR ILIPPHARIQAAASTP SDANTGDRGQTNNAAS R I Q D R G 7 1 2 2 0 1 0 1 0 1 0 0 0 0 1 2 4 0 0 0 0 0 22 0 2102.9829 P49841 P49841 384 405 GSK3B Glycogen synthase kinase-3 beta yes yes 2 0.00064313 106.35 By MS/MS By MS/MS 1 1 17323000 9169200 8154100 2714 1862 3077 7021;7022 6882;6883;6884 6882 7478 3 IQELEDLLAK ESRACLERIQELEDLL ELEDLLAKEKDNSRRM R I Q A K E 1 0 0 1 0 1 2 0 0 1 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1170.6496 P20700;E9PBF6 P20700 321 330 LMNB1 Lamin-B1 yes no 2 0.00097867 128.38 By MS/MS By MS/MS 1 1 7366000 4021800 3344100 2715 1739 3078 7023;7024 6885;6886 6886 2 IQELGDLYTPAPGR IRSEQRPRIQELGDLY LYTPAPGRAESGPEKP R I Q G R A 1 1 0 1 0 1 1 2 0 1 2 0 0 0 2 0 1 0 1 0 0 0 14 0 1528.7886 M0R2P8;M0R3A4;M0QYA2;Q9NWS0 M0R2P8 68 81 PIH1D1 PIH1 domain-containing protein 1 yes no 2 0.0017531 96.103 By MS/MS By MS/MS 1 1 10177000 5367000 4810000 2716 1405 3079 7025;7026 6887;6888;6889 6889 7273;8171 3 IQEQESSGEEDSDLSPEER EGLEPKYRIQEQESSG SDLSPEEREKKRQFEM R I Q E R E 0 1 0 2 0 2 6 1 0 1 1 0 0 0 1 4 0 0 0 0 0 0 19 0 2162.9087 E7EMN6;G1AUC5;Q6NXS1;P41236 E7EMN6 90 108 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 yes no 2 0.0016577 81.311 By matching By MS/MS 1 1 20689000 10555000 10134000 2717 792 3080 7027;7028 6890 6890 1409 1 IQGEYKYTQVGPDHNR NQYFQKEKIQGEYKYT QVGPDHNRSFIAEMTI K I Q N R S 0 1 1 1 0 2 1 2 1 1 0 1 0 0 1 0 1 0 2 1 0 0 16 1 1903.9177 Q08211 Q08211 194 209 DHX9 ATP-dependent RNA helicase A yes yes 2 0.030117 46.592 By MS/MS 1 0 0 0 2718 2012 3081 7029 6891 6891 1 IQIISTDSAVASPQR ________________ SAVASPQRIQIVTDQQ R I Q Q R I 2 1 0 1 0 2 0 0 0 3 0 0 0 0 1 3 1 0 0 1 0 0 15 0 1584.8471 P49116;C9J2Y1;C9JMI6;C9JKS0 P49116 8 22 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.025435 94.532 By MS/MS 1 0 0 0 2719 1850 3082 7030 6892 6892 1 IQLVEEELDR EVASLNRRIQLVEEEL LVEEELDRAQERLATA R I Q D R A 0 1 0 1 0 1 3 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 10 0 1242.6456 A0A087WWU8;Q5HYB6;J3KN67;H0YL80;D6R904;K7EP68;H0YKX5;H0YKP3;K7ERG3;K7ENT6;H0YNC7;F5H7S3;H7BYY1;H0YK48;H0YL52;B7Z596;Q5TCU3;CON__Q3SX28;Q5TCU8;Q6ZN40;P67936;P09493;P07951;P06753 A0A087WWU8 56 65 TPM3;DKFZp686J1372;TPM1;TPM4;TPM2 Tropomyosin alpha-4 chain;Tropomyosin alpha-1 chain;Tropomyosin beta chain;Tropomyosin alpha-3 chain yes no 2 0.00066657 128.27 By MS/MS By MS/MS 1 1 40863000 22217000 18646000 + 2720 99 3083 7031;7032 6893;6894 6894 2 IQPLEPDSPTGLSENPTPATEK PPPPPLPKIQPLEPDS NPTPATEKLFVPQESD K I Q E K L 1 0 1 1 0 1 3 1 0 1 2 1 0 0 5 2 3 0 0 0 0 0 22 0 2320.1434 Q9ULJ3 Q9ULJ3 996 1017 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2;3 5.4526E-05 90.06 By MS/MS By MS/MS 2 2 139200000 68047000 71148000 2721 3043 3084 7033;7034;7035;7036 6895;6896;6897;6898;6899 6899 6414 5 IQPQPPDEDGDHSDKEDEQPQVVVLK GPTVETKRIQPQPPDE QPQVVVLKKGDLSVEE R I Q L K K 0 0 0 5 0 4 3 1 1 1 1 2 0 0 4 1 0 0 0 3 0 0 26 1 2941.3941 Q96AT1 Q96AT1 38 63 KIAA1143 Uncharacterized protein KIAA1143 yes yes 3 0.0097056 49.613 By matching By MS/MS 1 1 226890000 98358000 128530000 2722 2622 3085 7037;7038 6900 6900 5391 1 IQQALTSPLPMTPILEGSHR PPLPLHIRIQQALTSP PILEGSHRAHSLLFEN R I Q H R A 1 1 0 0 0 2 1 1 1 2 3 0 1 0 3 2 2 0 0 0 0 0 20 0 2188.1674 Q8IZ21 Q8IZ21 421 440 PHACTR4 Phosphatase and actin regulator 4 yes yes 3 0.0042001 87.654 By MS/MS 1 0 0 0 2723 2446 3086 7039 6901 6901 5000 1 IQQFDDGGSDEEDIWEEK FEACCKERIQQFDDGG EEDIWEEKHIAFTPES R I Q E K H 0 0 0 4 0 2 4 2 0 2 0 1 0 1 0 1 0 1 0 0 0 0 18 0 2138.8916 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 316 333 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 2;3 3.989E-143 241.92 By MS/MS By MS/MS 3 3 1064300000 579430000 484850000 2724 896 3087 7040;7041;7042;7043;7044;7045 6902;6903;6904;6905;6906 6902 1676 5 IQQQFSDLK KYRMERPKIQQQFSDL QQQFSDLKRKLAEVTE K I Q L K R 0 0 0 1 0 3 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 9 0 1105.5768 O94906 O94906 138 146 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.0046128 100.82 By MS/MS By matching 2 1 40301000 25846000 14455000 2725 1574 3088 7046;7047;7048 6907 6907 2983 1 IQSETKNLKATR EDMVLVSRIQSETKNL TKNLKATRNESFHSHN R I Q T R N 1 1 1 0 0 1 1 0 0 1 1 2 0 0 0 1 2 0 0 0 0 0 12 2 1387.7783 Q96M83 Q96M83 655 666 CCDC7 Coiled-coil domain-containing protein 7 yes yes 2 0.03097 46.797 By MS/MS By matching 1 1 11569000 6630400 4938900 2726 2684 3089 7049;7050 6908 6908 1 IQSLPDLSR VRKELRSRIQSLPDLS QSLPDLSRLPNVTGSH R I Q S R L 0 1 0 1 0 1 0 0 0 1 2 0 0 0 1 2 0 0 0 0 0 0 9 0 1027.5662 K7ER50;Q96P16 K7ER50 20 28 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A yes no 2 0.014607 91.701 By MS/MS By matching 1 1 13595000 6507200 7088300 2727 1393 3090 7051;7052 6909 6909 2563 1 IQSSDDRR SWFHNGHRIQSSDDRR IQSSDDRRMTQYRDVH R I Q R R M 0 2 0 2 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 8 1 975.47337 Q15772 Q15772 1228 1235 SPEG Striated muscle preferentially expressed protein kinase yes yes 1 0.010159 56.122 By MS/MS 1 3148600 0 3148600 2728 2156 3091 7053 6910 6910 4280 1 IQVEQTRDEDLDTDSLD INPVTEKRIQVEQTRD DLDTDSLD________ R I Q L D - 0 1 0 5 0 2 2 0 0 1 2 0 0 0 0 1 2 0 0 1 0 0 17 1 1990.8967 V9GYT7 V9GYT7 49 65 PSIP1 yes yes 2 3.4267E-06 128.82 By MS/MS By MS/MS 1 1 45978000 23090000 22888000 2729 3228 3092 7054;7055 6911;6912 6912 6824 2 IQVYMSVLSLILYIFTK KKRFGGQRIQVYMSVL LILYIFTKISGSCWW_ R I Q T K I 0 0 0 0 0 1 0 0 0 3 3 1 1 1 0 2 1 0 2 2 0 0 17 0 2030.1526 H0Y5P9;F8WD86;Q2M3M2 H0Y5P9 150 166 SLC5A9 Sodium/glucose cotransporter 4 yes no 3 0.03108 41.542 By MS/MS 1 0 0 0 2730 1052 3093 7056 6913 6913 379 1 IREEYPDR MGTLLISKIREEYPDR IREEYPDRIMNTFSVV K I R D R I 0 2 0 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 8 1 1076.5251 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A075B736;Q5SQY0;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;Q3ZCM7 Q5JP53 137 144 TUBB;TUBB2B;TUBB2A;TUBB8;TUBB1;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-8 chain no no 3 0.012977 98.582 By MS/MS By matching 1 1 14538000 9492800 5045300 2731 1653;1958 3094 7057;7058 6914 6914 1 IRKPSLLYEGFESPTMASVPALQLTPANPPPPEVSNPK EAAAPGKRIRKPSLLY PPEVSNPKKPGRVTNQ R I R P K K 3 1 2 0 0 1 3 1 0 1 4 2 1 1 9 4 2 0 1 2 0 0 38 2 4072.1343 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2;E9PKQ9;H0Y799;A0A140T9X8 H0Y6K2 39 76 BRD2 Bromodomain-containing protein 2 yes no 4 0.0055305 43.414 By MS/MS 1 20600000 0 20600000 2732 353 3095 7059 6915;6916 6916 139 628;629;6932 2 IRPLSDGNSPWSTILIK DRTDCKERIRPLSDGN PWSTILIKNQKTMPLA R I R I K N 0 1 1 1 0 0 0 1 0 3 2 1 0 0 2 3 1 1 0 0 0 0 17 1 1896.0469 Q5TCX8;X6R610 Q5TCX8 610 626 MLK4;KIAA1804 Mitogen-activated protein kinase kinase kinase MLK4 yes no 2 0.0316 63.145 By MS/MS 1 5498900 0 5498900 2733 2254 3096 7060 6917 6917 1 IRSLLER LQNERTERIRSLLERQ RIRSLLERQAREIEAF R I R E R Q 0 2 0 0 0 0 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 7 1 885.5396 Q7L7X3 Q7L7X3 864 870 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 2 0.029332 66.27 By MS/MS 1 0 0 0 2734 2366 3097 7061 6918 6918 1 IRSSVEKENQK LKNKEDEKIRSSVEKE SVEKENQKSKGQENDH K I R Q K S 0 1 1 0 0 1 2 0 0 1 0 2 0 0 0 2 0 0 0 1 0 0 11 2 1316.7048 E9PG73;Q13427 E9PG73 699 709 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 3 0.0023081 89.46 By MS/MS 1 61725000 0 61725000 2735 871 3098 7062 6919 6919 1601;1602 1 ISAPELLLHSPAR NPQDTPVKISAPELLL LLLHSPARSAMCLTGS K I S A R S 2 1 0 0 0 0 1 0 1 1 3 0 0 0 2 2 0 0 0 0 0 0 13 0 1402.7932 Q5VUA4 Q5VUA4 1887 1899 ZNF318 Zinc finger protein 318 yes yes 2;3 0.0079865 72.446 By matching By MS/MS 1 2 14226000 9367500 4858300 2736 2268 3099 7063;7064;7065 6920;6921 6921 4556 2 ISDAELEAELEK TNSVPNPRISDAELEA ELEAELEKLSLSEGGL R I S E K L 2 0 0 1 0 0 4 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 12 0 1345.6613 Q8WUX9 Q8WUX9 416 427 CHMP7 Charged multivesicular body protein 7 yes yes 2 0.011657 72.209 By matching By MS/MS 1 1 18675000 9609300 9065700 2737 2558 3100 7066;7067 6922 6922 5225 1 ISDSESEDPPR NEELPKPRISDSESED SESEDPPRHQASDSEN R I S P R H 0 1 0 2 0 0 2 0 0 1 0 0 0 0 2 3 0 0 0 0 0 0 11 0 1230.5364 Q96ST2;B8ZZB6 Q96ST2 247 257 IWS1 Protein IWS1 homolog yes no 2 0.00066821 106.54 By MS/MS By MS/MS 1 1 122840000 59448000 63396000 2738 2711 3101 7068;7069 6923;6924;6925;6926 6925 5605;5606 4 ISDVHFSVKPSASASSPK RAQAEALRISDVHFSV SASASSPKLHSSAAVH R I S P K L 2 0 0 1 0 0 0 0 1 1 0 2 0 1 2 6 0 0 0 2 0 0 18 1 1842.9476 O95503 O95503 92 109 CBX6 Chromobox protein homolog 6 yes yes 3 0.00012602 104.21 By MS/MS By MS/MS 1 1 8912900 5081100 3831700 2739 1598 3102 7070;7071 6927;6928 6927 3031 2 ISDYFEYQGGNGSSPVR SIGGRGHKISDYFEYQ GNGSSPVRGIPPAIRS K I S V R G 0 1 1 1 0 1 1 3 0 1 0 0 0 1 1 3 0 0 2 1 0 0 17 0 1874.8435 C9JWT6;B3KRP1;Q9UKI8 C9JWT6 71 87 TLK1 Serine/threonine-protein kinase tousled-like 1 yes no 2 1.2116E-22 154.39 By MS/MS By MS/MS 2 3 40198000 14924000 25274000 2740 540 3103;3104 7072;7073;7074;7075;7076 6929;6930;6931;6932 6931 20 1016;1017 4 ISEGLPTPTK SPLKSPYKISEGLPTP EGLPTPTKMTPRSRIL K I S T K M 0 0 0 0 0 0 1 1 0 1 1 1 0 0 2 1 2 0 0 0 0 0 10 0 1041.5706 P06400 P06400 815 824 RB1 Retinoblastoma-associated protein yes yes 2 0.011273 102.97 By MS/MS By MS/MS 1 1 0 0 0 2741 1645 3105 7077;7078 6933;6934 6933 7370;7371 2 ISEGLPTPTKMTPR SPLKSPYKISEGLPTP TPTKMTPRSRILVSIG K I S P R S 0 1 0 0 0 0 1 1 0 1 1 1 1 0 3 1 3 0 0 0 0 0 14 1 1526.8127 P06400 P06400 815 828 RB1 Retinoblastoma-associated protein yes yes 2;3 0.0019072 94.532 By MS/MS By MS/MS 6 5 106430000 50603000 55831000 2742 1645 3106;3107;3108;3109 7079;7080;7081;7082;7083;7084;7085;7086;7087;7088;7089 6935;6936;6937;6938;6939;6940;6941;6942;6943 6936 598 7370;7371;7372 8 ISESPEPGQR ________________ ESPEPGQRTFTTLSSV R I S Q R T 0 1 0 0 0 1 2 1 0 1 0 0 0 0 2 2 0 0 0 0 0 0 10 0 1098.5306 H7C4B6;O14867 H7C4B6 8 17 BACH1 Transcription regulator protein BACH1 yes no 2 0.02293 86.344 By MS/MS 1 3293300 3293300 0 2743 1287 3110 7090 6944 6944 2382 0 ISETFQLDSNLGEISTLQSLDYEESR SFRNEEEKISETFQLD SLDYEESRFYLMEVVA K I S S R F 0 1 1 2 0 2 4 1 0 2 4 0 0 1 0 5 2 0 1 0 0 0 26 0 2973.4091 Q9Y5G8 Q9Y5G8 288 313 PCDHGA5 Protocadherin gamma-A5 yes yes 3 0.027268 47.564 By MS/MS 1 2739100 0 2739100 2744 3128 3111 7091 6945 6945 6701;6702 0 ISGLIYEETR ARRGGVKRISGLIYEE GLIYEETRGVLKVFLE R I S T R G 0 1 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1179.6136 P62805 P62805 47 56 HIST1H4A Histone H4 yes yes 2 0.0066172 87.806 By MS/MS By matching 1 1 135800000 68409000 67396000 2745 1945 3112 7092;7093 6946 6946 1 ISHSLYSGIEGLDESPSR ALDDRERRISHSLYSG GLDESPSRNAALSRIM R I S S R N 0 1 0 1 0 0 2 2 1 2 2 0 0 0 1 5 0 0 1 0 0 0 18 0 1945.9381 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8;B1AP52 Q5VWV2 657 674 PARD3 Partitioning defective 3 homolog yes no 2;3 0.00023835 117.7 By MS/MS By MS/MS 2 2 45614000 26797000 18817000 2746 2278 3113 7094;7095;7096;7097 6947;6948;6949;6950 6948 4572;4573;4574;8371 4 ISIFDNLDVVSEDEEAPEEAPENGSNKENTETPAATPK DLHGRVHRISIFDNLD ETPAATPKSGKHKNKE R I S P K S 4 0 4 3 0 0 8 1 0 2 1 2 0 1 4 3 3 0 0 2 0 0 38 1 4085.8713 P55201 P55201 110 147 BRPF1 Peregrin yes yes 3 1.7828E-05 60.876 By MS/MS 1 17984000 0 17984000 2747 1912 3114 7098 6951 6951 3698 1 ISKLEVTEIVKPSPK DFESSSMKISKLEVTE EIVKPSPKRKMEPDTE K I S P K R 0 0 0 0 0 0 2 0 0 2 1 3 0 0 2 2 1 0 0 2 0 0 15 2 1666.9869 Q7Z6E9 Q7Z6E9 1167 1181 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 3 0.0023447 86.777 By MS/MS By matching 1 1 27417000 15452000 11966000 2748 2393 3115 7099;7100 6952 6952 4876 1 ISLEQPPNGSDTPNPEK ESTPVDDRISLEQPPN SDTPNPEKYQESPGIQ R I S E K Y 0 0 2 1 0 1 2 1 0 1 1 1 0 0 4 2 1 0 0 0 0 0 17 0 1821.8745 E9PJ60;Q9UHI6 E9PJ60 302 318 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.01184 65.105 By MS/MS By matching 1 1 8086500 4664600 3421900 2749 887 3116 7101;7102 6953 6953 7117 1 ISLPGQMAGTPITPLK RPFEEGKKISLPGQMA GTPITPLKDGFTEVQL K I S L K D 1 0 0 0 0 1 0 2 0 2 2 1 1 0 3 1 2 0 0 0 0 0 16 0 1622.9066 Q9H8Y8 Q9H8Y8 213 228 GORASP2 Golgi reassembly-stacking protein 2 yes yes 2 0.00086508 100.41 By MS/MS By matching 1 1 8179700 4845400 3334300 2750 2858 3117 7103;7104 6954 6954 7859 1 ISLPLPNFSSLNLR LLEGEESRISLPLPNF NFSSLNLRETNLDSLP R I S L R E 0 1 2 0 0 0 0 0 0 1 4 0 0 1 2 3 0 0 0 0 0 0 14 0 1569.8879 P08670;B0YJC4 P08670 411 424 VIM Vimentin yes no 2 4.4636E-07 130.95 By MS/MS 1 11656000 11656000 0 2751 1663 3118 7105 6955;6956 6956 3135;3136 2 ISLPSDFQHK LKLKDGHRISLPSDFQ LPSDFQHKITVQASPN R I S H K I 0 0 0 1 0 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 0 0 10 0 1170.6033 Q5TCX8;G3V4P9;G3V347;A0A087WW79;J3KPI6;P80192 Q5TCX8 513 522 MLK4;MAP3K9 Mitogen-activated protein kinase kinase kinase MLK4;Mitogen-activated protein kinase kinase kinase 9 yes no 2 0.021548 63.534 By matching By MS/MS 1 1 11704000 5616700 6086900 2752 2254 3119 7106;7107 6957 6957 4509 1 ISLSKSPTKTDPK KLAKPMEKISLSKSPT SPTKTDPKNEEEEKRR K I S P K N 0 0 0 1 0 0 0 0 0 1 1 3 0 0 2 3 2 0 0 0 0 0 13 2 1400.7875 A0A0A0MRN4;Q5BKZ1 A0A0A0MRN4 176 188 ZNF326 DBIRD complex subunit ZNF326 yes no 2 0.025011 71.529 By matching By MS/MS 1 1 142480000 75866000 66614000 2753 224 3120 7108;7109 6958 6958 396 1 ISMQDVDLSLGSPK EMIIQKPKISMQDVDL DLSLGSPKLKGDIKVS K I S P K L 0 0 0 2 0 1 0 1 0 1 2 1 1 0 1 3 0 0 0 1 0 0 14 0 1488.7494 Q09666 Q09666 500 513 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.00021478 118.47 By matching By MS/MS 1 1 10786000 5734600 5051300 2754 2020 3121 7110;7111 6959 6959 3913 1 ISMSEVDLNVAAPK SGKTGTCRISMSEVDL DLNVAAPKVKGGVDVT R I S P K V 2 0 1 1 0 0 1 0 0 1 1 1 1 0 1 2 0 0 0 2 0 0 14 0 1472.7545 Q09666 Q09666 569 582 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0056211 78.69 By matching By MS/MS 1 1 7833200 5310800 2522400 2755 2020 3122 7112;7113 6960 6960 3914 1 ISNLSPEEEQGLWK RHSSSHHKISNLSPEE EEEQGLWKQSHKSSAT K I S W K Q 0 0 1 0 0 1 3 1 0 1 2 1 0 0 1 2 0 1 0 0 0 0 14 0 1628.8046 F5GX09;Q5HYJ3 F5GX09 189 202 FAM76B Protein FAM76B yes no 2 7.6994E-21 159.64 By MS/MS By MS/MS 1 1 139850000 76951000 62897000 2756 942 3123 7114;7115 6961;6962;6963 6963 1768 3 ISREPEPAAGPQAEESATVSAPAPMSPTR EVKLQSGKISREPEPA PAPMSPTRRRALDHYL K I S T R R 6 2 0 0 0 1 4 1 0 1 0 0 1 0 6 4 2 0 0 1 0 0 29 1 2933.4189 Q9BWG6 Q9BWG6 158 186 SCNM1 Sodium channel modifier 1 yes yes 3 0.00042425 61.526 By MS/MS By matching 1 1 23783000 8710100 15073000 2757 2764 3124 7116;7117 6964 6964 1099 7831 1 ISSKSPGHMVILDQTK KKSEEKKRISSKSPGH MVILDQTKGDHCRPSR R I S T K G 0 0 0 1 0 1 0 1 1 2 1 2 1 0 1 3 1 0 0 1 0 0 16 1 1739.924 Q9NWH9 Q9NWH9 549 564 SLTM SAFB-like transcription modulator yes yes 3 0.00028204 94.45 By MS/MS By MS/MS 1 2 27706000 7084400 20622000 2758 2933 3125;3126 7118;7119;7120 6965;6966;6967;6968 6968 6187;6188 4 ISSLLEEQFQQGK DERKKNAKISSLLEEQ EEQFQQGKLLACIASR K I S G K L 0 0 0 0 0 3 2 1 0 1 2 1 0 1 0 2 0 0 0 0 0 0 13 0 1505.7726 Q5JR95;P62241 Q5JR95 138 150 RPS8 40S ribosomal protein S8 yes no 2 0.0013393 92.295 By MS/MS By MS/MS 1 1 6401600 3482600 2919000 2759 1935 3127 7121;7122 6969;6970 6969 3730 2 ISSTLYQAAAPVLTPAK VGLYYINKISSTLYQA APVLTPAKVTGKSKKR K I S A K V 4 0 0 0 0 1 0 0 0 1 2 1 0 0 2 2 2 0 1 1 0 0 17 0 1729.9614 Q8N6L1 Q8N6L1 111 127 KRTCAP2 Keratinocyte-associated protein 2 yes yes 2 0.00021087 122.1 By MS/MS By MS/MS 1 1 37327000 23167000 14161000 2760 2480 3128 7123;7124 6971;6972 6971 7723 2 ISSTPTTETIR KSTRRSGRISSTPTTE TPTTETIRGIDSDDVQ R I S I R G 0 1 0 0 0 0 1 0 0 2 0 0 0 0 1 2 4 0 0 0 0 0 11 0 1204.6299 A0A075B754;Q96QE3 A0A075B754 600 610 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 1.7379E-09 155.47 By MS/MS By MS/MS 1 1 37356000 19566000 17790000 2761 18 3129 7125;7126 6973;6974 6974 32 2 ISSVPNSLSK SGDVQTMKISSVPNSL SVPNSLSKRNVSLTRS K I S S K R 0 0 1 0 0 0 0 0 0 1 1 1 0 0 1 4 0 0 0 1 0 0 10 0 1030.5659 R4GNB2;R4GN35;Q5VZ89;X6RAE7;X6R5W5 R4GNB2 1621 1630 DENND4C DENN domain-containing protein 4C yes no 2 0.0085059 77.124 By MS/MS By matching 1 1 6493700 2942700 3551000 2762 2281 3130 7127;7128 6975 6975 4581 1 ISSYPEDNFPDEEK PPLPPKPRISSYPEDN DNFPDEEKASTIKHCP R I S E K A 0 0 1 2 0 0 3 0 0 1 0 1 0 1 2 2 0 0 1 0 0 0 14 0 1668.7155 A0A0A0MQR1;Q9Y4K4 A0A0A0MQR1 398 411 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 5 yes no 2 0.024832 81.703 By MS/MS 1 0 0 0 2763 185 3131 7129 6976 6976 324 1 ISTASQVSQGTGSPVPK STGSPTNKISTASQVS GTGSPVPKIHGSSFVT K I S P K I 1 0 0 0 0 2 0 2 0 1 0 1 0 0 2 4 2 0 0 2 0 0 17 0 1642.8526 Q9ULM3 Q9ULM3 524 540 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.00064073 114.54 By MS/MS By MS/MS 1 1 66575000 34862000 31713000 2764 3046 3132 7130;7131 6977;6978 6977 6426;7910 2 ISTVAVQSVNAGAPLITSTSPTTATSPK VMTSLGQKISTVAVQS PTTATSPKVVIQTIPT K I S P K V 4 0 1 0 0 1 0 1 0 2 1 1 0 0 3 5 6 0 0 3 0 0 28 0 2698.4389 Q15723 Q15723 405 432 ELF2 ETS-related transcription factor Elf-2 yes yes 3 8.4862E-10 102.46 By MS/MS By MS/MS 1 1 20922000 11374000 9548200 2765 2153 3133 7132;7133 6979;6980 6979 4275 2 ISYIPDEEVSSPSPPQR QFENYSFKISYIPDEE SSPSPPQRAQRGDHSS K I S Q R A 0 1 0 1 0 1 2 0 0 2 0 0 0 0 4 4 0 0 1 1 0 0 17 0 1899.9214 F8W930;Q9Y6M1 F8W930 158 174 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 yes no 2;3 2.3439E-42 177.07 By MS/MS By MS/MS 5 4 168570000 90645000 77925000 2766 1039 3134;3135 7134;7135;7136;7137;7138;7139;7140;7141;7142 6981;6982;6983;6984;6985;6986;6987;6988;6989 6987 1960;1961;1962 9 ISYTPPESPVPSYASSTPLHVPVPR QCSIKQERISYTPPES PLHVPVPRALRMEEDS R I S P R A 1 1 0 0 0 0 1 0 1 1 1 0 0 0 7 5 2 0 2 3 0 0 25 0 2677.3752 P41212 P41212 15 39 ETV6 Transcription factor ETV6 yes yes 3 0.02302 48.244 By matching By MS/MS 1 1 10847000 4317400 6529300 2767 1818 3136 7143;7144 6990 6990 3425 1 ITAEDCTMEVTPGAEIQDGR PVTSTTNKITAEDCTM GAEIQDGRFNLFKVQQ K I T G R F 2 1 0 2 1 1 3 2 0 2 0 0 1 0 1 0 3 0 0 1 0 0 20 0 2191.9725 Q6UN15;A0A0B4J203 Q6UN15 211 230 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 2 0.010462 59.733 By MS/MS By MS/MS 1 1 25868000 15085000 10783000 2768 2338 3137 7145;7146 6991;6992 6992 938 7672 2 ITFITSFGGSDEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGR PTPGREEKITFITSFG PGGPAPGRNASARRRS K I T G R N 12 1 0 1 0 1 2 7 0 2 0 1 0 2 7 3 4 0 0 1 0 0 44 1 4019.0025 F5H0Q6;A0A0A0MQS2;Q8N2M8 F5H0Q6 326 369 CLASRP CLK4-associating serine/arginine rich protein yes no 3 0.00022318 56.664 By MS/MS 1 30549000 0 30549000 2769 188 3138 7147 6993 6993 339 1 ITIADCGQLE RNGKTSKKITIADCGQ IADCGQLE________ K I T L E - 1 0 0 1 1 1 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1118.5278 P62937 P62937 156 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.0097494 84.498 By matching By MS/MS 1 1 17818000 9232000 8585600 2770 1950 3139 7148;7149 6994 6994 1 ITISSLQDLTLYNPER VEQDTETKITISSLQD LTLYNPERTITVKGAI K I T E R T 0 1 1 1 0 1 1 0 0 2 3 0 0 0 1 2 2 0 1 0 0 0 16 0 1861.9785 Q9NZI8 Q9NZI8 310 325 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.0047779 97.904 By matching By MS/MS 1 1 8960700 6725700 2235000 2771 2959 3140 7150;7151 6995 6995 6231 0 ITITNDK KSTGKENKITITNDKG KITITNDKGRLSKEDI K I T D K G 0 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 2 0 0 0 0 0 7 0 803.43888 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37;P11142;E9PKE3;E9PNE6;P54652;A8K7Q2;E9PM13;E9PS65;P17066 P11142 501 507 HSPA1B;HSPA1A;HSPA8;HSPA2;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6 no no 2 0.013172 124.37 By MS/MS By matching 1 1 53898000 31314000 22585000 2772 1680;351;1711 3141 7152;7153 6996 6996 1 ITKPGSIDSNNQLFAPGGR IDTSRLTKITKPGSID QLFAPGGRLSWGKGSS K I T G R L 1 1 2 1 0 1 0 3 0 2 1 1 0 1 2 2 1 0 0 0 0 0 19 1 1971.0174 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 909 927 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 0.020577 52.612 By MS/MS By matching 1 1 40647000 22257000 18389000 2773 826 3142 7154;7155 6997 6997 1525 1 ITKPGSIDSNNQLFAPGGRLSWGK IDTSRLTKITKPGSID GGRLSWGKGSSGGSGA K I T G K G 1 1 2 1 0 1 0 4 0 2 2 2 0 1 2 3 1 1 0 0 0 0 24 2 2542.3292 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 909 932 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 9.0771E-06 94.152 By MS/MS By MS/MS 1 1 108400000 64924000 43477000 2774 826 3143 7156;7157 6998;6999 6998 1525;1526 2 ITLPVDFVTADKFDENAK KAEKNGVKITLPVDFV DKFDENAKTGQATVAS K I T A K T 2 0 1 3 0 0 1 0 0 1 1 2 0 2 1 0 2 0 0 2 0 0 18 1 2022.031 P00558 P00558 280 297 PGK1 Phosphoglycerate kinase 1 yes yes 3 0.002609 84.94 By MS/MS By MS/MS 1 1 10219000 5209000 5010200 2775 1626 3144 7158;7159 7000;7001 7000 2 ITNDYIF NEAMPSLKITNDYIF_ KITNDYIF________ K I T I F - 0 0 1 1 0 0 0 0 0 2 0 0 0 1 0 0 1 0 1 0 0 0 7 0 884.42798 Q8NC54 Q8NC54 259 265 KCT2 Keratinocyte-associated transmembrane protein 2 yes yes 2 0.013216 114.02 By MS/MS 1 0 0 0 2776 2499 3145 7160 7002 7002 8401 1 ITPLEIEVLEETVQTMDTS TTAVLTEKITPLEIEV TVQTMDTS________ K I T T S - 0 0 0 1 0 1 4 0 0 2 2 0 1 0 1 1 4 0 0 2 0 0 19 0 2147.0555 Q99436 Q99436 259 277 PSMB7 Proteasome subunit beta type-7 yes yes 3 0.013384 53.21 By MS/MS By matching 1 1 5856900 4123200 1733700 2777 2720 3146 7161;7162 7003 7003 1080 1 ITPLSLQTQGSSHETLNIVEEK PNEWEKRRITPLSLQT TLNIVEEKKRAEVGKD R I T E K K 0 0 1 0 0 2 3 1 1 2 3 1 0 0 1 3 3 0 0 1 0 0 22 0 2423.2544 O43491;E9PMV8;Q6R5J7 O43491 672 693 EPB41L2 Band 4.1-like protein 2 yes no 3 0.00026605 77.391 By MS/MS By MS/MS 1 1 22774000 10187000 12587000 2778 1502 3147 7163;7164 7004;7005;7006 7006 2807;2808;7315 3 ITPPAAKPGSPQAK SMVQKSPRITPPAAKP KPGSPQAKSLQPAVAE R I T A K S 3 0 0 0 0 1 0 1 0 1 0 2 0 0 4 1 1 0 0 0 0 0 14 1 1361.7667 P35658;A0A0A0MSW3 P35658 669 682 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.0024828 91.789 By MS/MS By matching 1 1 46532000 43831000 2701100 2779 1801 3148 7165;7166 7007 7007 3402 1 ITSFPESEGYSYETSTK YSYETTEKITSFPESE YSYETSTKTTRTPDTS K I T T K T 0 0 0 0 0 0 3 1 0 1 0 1 0 1 1 4 3 0 2 0 0 0 17 0 1924.8578 P46821 P46821 2014 2030 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.5641E-06 129.76 By MS/MS By MS/MS 2 2 56522000 30667000 25855000 2780 1840 3149;3150 7167;7168;7169;7170 7008;7009;7010;7011;7012 7010 3498;8271 4 ITSPLMEPSSIEK VCLAVEKRITSPLMEP MEPSSIEKIVEIDAHI R I T E K I 0 0 0 0 0 0 2 0 0 2 1 1 1 0 2 3 1 0 0 0 0 0 13 0 1430.7327 P28066 P28066 54 66 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.00024725 98.582 By MS/MS By MS/MS 2 2 107040000 62079000 44964000 2781 1770 3151;3152 7171;7172;7173;7174 7013;7014;7015 7013 671 3337 3 ITVNGDSSAEAEELANEI PGYEEDMKITVNGDSS AEELANEI________ K I T E I - 3 0 2 1 0 0 4 1 0 2 1 0 0 0 0 2 1 0 0 1 0 0 18 0 1860.8589 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 848 865 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 2 4.2168E-125 236.75 By MS/MS 1 17565000 0 17565000 2782 289 3153 7175 7016 7016 12 515 1 IVAHAVEVPAVQSPR RKPIVLKRIVAHAVEV VPAVQSPRRSPRISFF R I V P R R 3 1 0 0 0 1 1 0 1 1 0 0 0 0 2 1 0 0 0 4 0 0 15 0 1571.8784 B5MBX0;Q96FF9;H0YCL8 B5MBX0 63 77 CDCA5 Sororin yes no 2;3 0.00035027 112.12 By MS/MS By MS/MS 2 4 54351000 32666000 21685000 2783 573 3154 7176;7177;7178;7179;7180;7181 7017;7018;7019;7020;7021;7022;7023 7019 1052 7 IVDDWANDGWGLK FIICADRRIVDDWAND ANDGWGLKKAADGAAE R I V L K K 1 0 1 3 0 0 0 2 0 1 1 1 0 0 0 0 0 2 0 1 0 0 13 0 1487.7045 P27824 P27824 446 458 CANX Calnexin yes yes 2 0.019547 74.944 By MS/MS By matching 1 1 7336600 3127700 4208900 2784 1769 3155 7182;7183 7024 7024 1 IVEPEVVGESDSEVEGDAWR ERLARHRKIVEPEVVG EVEGDAWRMEREDSSE K I V W R M 1 1 0 2 0 0 5 2 0 1 0 0 0 0 1 2 0 1 0 4 0 0 20 0 2201.0124 P55081 P55081 107 126 MFAP1 Microfibrillar-associated protein 1 yes yes 2;3 6.7562E-24 158.5 By MS/MS By MS/MS 3 4 412130000 214610000 197520000 2785 1909 3156;3157 7184;7185;7186;7187;7188;7189;7190 7025;7026;7027;7028;7029;7030;7031;7032;7033;7034;7035 7033 3690;3691 11 IVEVLLMK AVFGKYGRIVEVLLMK IVEVLLMKDRETNKSR R I V M K D 0 0 0 0 0 0 1 0 0 1 2 1 1 0 0 0 0 0 0 2 0 0 8 0 943.57763 P38159;H0Y6E7;H3BT71;H3BR27;O75526 P38159 34 41 RBMX;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2 yes no 2 0.017948 102.77 By MS/MS 1 2331300 2331300 0 2786 1806 3158 7191 7036 7036 1 IVEYSPPSAPR ALPEPKVRIVEYSPPS YSPPSAPRRPPVYYKF R I V P R R 1 1 0 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 1 0 0 11 0 1214.6295 O95696 O95696 124 134 BRD1 Bromodomain-containing protein 1 yes yes 2 5.6895E-05 122.55 By MS/MS By MS/MS 1 1 47641000 25305000 22336000 2787 1606 3159 7192;7193 7037;7038;7039;7040;7041 7041 3044 5 IVHECQELSSPVITTSPASFEENK SLDNVNHKIVHECQEL PASFEENKIVLEEQSS K I V N K I 1 0 1 0 1 1 4 0 1 2 1 1 0 1 2 4 2 0 0 2 0 0 24 0 2701.2905 H7C5U4;H0YCV8;A0A0G2JNU3;A6H8Y1 H7C5U4 291 314 BDP1 Transcription factor TFIIIB component B homolog yes no 3 0.01927 42.705 By matching By MS/MS 1 1 11675000 6633800 5041300 2788 360 3160 7194;7195 7042 7042 645 1 IVLTSLPALAVPPPTPTK ALPTSHPKIVLTSLPA VPPPTPTKAAPPALVN K I V T K A 2 0 0 0 0 0 0 0 0 1 3 1 0 0 5 1 3 0 0 2 0 0 18 0 1814.0917 H0YCH1;O75398 H0YCH1 206 223 DEAF1 Deformed epidermal autoregulatory factor 1 homolog yes no 2 0.00062847 100.58 By MS/MS By MS/MS 1 1 18114000 12089000 6025200 2789 1169 3161 7196;7197 7043;7044 7044 7215;7216 2 IVNHWASPELR STFRQNPRIVNHWASP HWASPELRQNPGVKNE R I V L R Q 1 1 1 0 0 0 1 0 1 1 1 0 0 0 1 1 0 1 0 1 0 0 11 0 1320.6939 F1T0I1;J3KNL6;O15027 F1T0I1 308 318 SEC16A Protein transport protein Sec16A yes no 3 0.018699 60.196 By MS/MS 1 0 0 0 2790 930 3162 7198 7045 7045 1739 1 IVPQSQVPNPESPGK QPIASSCKIVPQSQVP PNPESPGKSFQPITMS K I V G K S 0 0 1 0 0 2 1 1 0 1 0 1 0 0 4 2 0 0 0 2 0 0 15 0 1575.8257 Q9ULM3 Q9ULM3 436 450 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.00052395 99.392 By MS/MS By MS/MS 1 1 55611000 22210000 33402000 2791 3046 3163 7199;7200 7046;7047 7047 6427 2 IVRGDQPAASGDSDDDEPPPLPR LCIFLLYKIVRGDQPA DEPPPLPRLKRRDFTP K I V P R L 2 2 0 5 0 1 1 2 0 1 1 0 0 0 5 2 0 0 0 1 0 0 23 1 2403.1302 O00264 O00264 45 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 8.4177E-06 120.4 By MS/MS By MS/MS 1 1 56036000 37435000 18601000 2792 1430 3164 7201;7202 7048;7049;7050;7051;7052 7051 2627;2628 5 IVSAQSLAEDDVE KLPTISQRIVSAQSLA SLAEDDVE________ R I V V E - 2 0 0 2 0 1 2 0 0 1 1 0 0 0 0 2 0 0 0 2 0 0 13 0 1374.6515 Q15388 Q15388 133 145 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 2 9.962E-07 129.17 By MS/MS By MS/MS 2 2 122970000 63891000 59075000 2793 2136 3165 7203;7204;7205;7206 7053;7054;7055;7056;7057 7054 4234;4235 5 IVSDGEDEDDSFK KIRSKARRIVSDGEDE EDEDDSFKDTSSINPF R I V F K D 0 0 0 4 0 0 2 1 0 1 0 1 0 1 0 2 0 0 0 1 0 0 13 0 1454.6049 B5MDQ0;Q2NKX8 B5MDQ0 903 915 ERCC6L DNA excision repair protein ERCC-6-like yes no 2 0.009175 74.853 By matching By MS/MS 1 1 13879000 6355900 7522600 2794 582 3166 7207;7208 7058 7058 1064 1 IVSGSPISTPSPSPLPR QPITMSCKIVSGSPIS PSPSPLPRTPTSTPVH K I V P R T 0 1 0 0 0 0 0 1 0 2 1 0 0 0 5 5 1 0 0 1 0 0 17 0 1690.9254 Q9ULM3 Q9ULM3 461 477 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0017094 87.669 By MS/MS By MS/MS 1 1 20690000 10403000 10287000 2795 3046 3167 7209;7210 7059;7060 7059 6428;6429 2 IVSSTSSENSSVPMLFNK PVSHLSEKIVSSTSSE SVPMLFNKNSVPVSVC K I V N K N 0 0 2 0 0 0 1 0 0 1 1 1 1 1 1 6 1 0 0 2 0 0 18 0 1925.9404 Q9C0F0 Q9C0F0 1216 1233 ASXL3 Putative Polycomb group protein ASXL3 yes yes 2 0.031335 41.684 By MS/MS 1 0 0 0 2796 2794 3168 7211 7061 7061 1108 1 IVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPR AKKAETDKIVVGSSVA NNPHAIPRRHAPIEQL K I V P R R 4 1 3 1 0 0 1 2 1 2 1 0 1 0 7 8 5 0 0 3 0 0 40 0 3943.9222 G3V3Z8;P49757 G3V3Z8 80 119 NUMB Protein numb homolog yes no 3 0.032247 43.483 By MS/MS 1 0 0 0 2797 1077 3169 7212 7062 7062 388 1 IWHHTFYNELR TNWDDMEKIWHHTFYN HTFYNELRVAPEEHPV K I W L R V 0 1 1 0 0 0 1 0 2 1 1 0 0 1 0 0 1 1 1 0 0 0 11 0 1514.7419 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8;C9JUM1;C9JZR7;Q6S8J3;A5A3E0;P0CG38;Q9BYX7;P0CG39;P68133;P68032;A6NL76 P63261 85 95 ACTG1;ACTB;POTEE;POTEF;POTEI;POTEKP;POTEJ;ACTA1;ACTC1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1 no no 2 0.023535 73.233 By MS/MS 1 3344400 0 3344400 2798 1928;1955 3170 7213 7063 7063 1 IWSPTIGR GQTYNPWRIWSPTIGR IWSPTIGRRSSDPWSN R I W G R R 0 1 0 0 0 0 0 1 0 2 0 0 0 0 1 1 1 1 0 0 0 0 8 0 928.51305 Q92545 Q92545 1861 1868 TMEM131 Transmembrane protein 131 yes yes 2 0.0088271 99.375 By MS/MS By MS/MS 1 1 39153000 22133000 17020000 2799 2582 3171 7214;7215 7064;7065 7065 5301 2 IYDILSDNGPQQPSTTVK NMEIGGLKIYDILSDN QQPSTTVKITSAVDGK K I Y V K I 0 0 1 2 0 2 0 1 0 2 1 1 0 0 2 2 2 0 1 1 0 0 18 0 1974.9898 Q96RT1 Q96RT1 883 900 ERBB2IP Protein LAP2 yes yes 3 0.029615 45.342 By MS/MS 1 5287300 0 5287300 2800 2705 3172 7216 7066 7066 1 IYEPLDVK ADPDEFERIYEPLDVK IYEPLDVKSKKIHVVD R I Y V K S 0 0 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 0 1 1 0 0 8 0 975.5277 P47712 P47712 534 541 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 2 0.0068331 147.34 By MS/MS By MS/MS 1 1 18800000 9504000 9296200 2801 1842 3173 7217;7218 7067;7068;7069 7068 8283 3 IYESIEEAK ARLADKNKIYESIEEA YESIEEAKSEAMKEME K I Y A K S 1 0 0 0 0 0 3 0 0 2 0 1 0 0 0 1 0 0 1 0 0 0 9 0 1080.5339 Q14DU5;E9PF63;O75116 Q14DU5 36 44 ROCK2 Rho-associated protein kinase 2 yes no 2 0.0012749 115.49 By MS/MS By MS/MS 1 1 22265000 10951000 11314000 2802 862 3174 7219;7220 7070;7071 7071 8126 2 IYHLPDAESDEDEDFK EIEEHNIKIYHLPDAE SDEDEDFKEQTRLLKA K I Y F K E 1 0 0 4 0 0 3 0 1 1 1 1 0 1 1 1 0 0 1 0 0 0 16 0 1921.8218 Q15019;H7C2Y0;B5MCX3 Q15019 210 225 SEPT2 Septin-2 yes no 2;3 2.237E-42 172.6 By MS/MS By MS/MS 2 2 169220000 94323000 74901000 2803 2117 3175 7221;7222;7223;7224 7072;7073;7074;7075;7076 7076 4184 5 IYHLPDAESDEDEDFKEQTR EIEEHNIKIYHLPDAE EDFKEQTRLLKASIPF K I Y T R L 1 1 0 4 0 1 4 0 1 1 1 1 0 1 1 1 1 0 1 0 0 0 20 1 2436.0717 Q15019;H7C2Y0;B5MCX3 Q15019 210 229 SEPT2 Septin-2 yes no 2;3;4 2.4781E-05 113.05 By MS/MS By MS/MS 4 4 2464500000 1341000000 1123500000 2804 2117 3176 7225;7226;7227;7228;7229;7230;7231;7232 7077;7078;7079;7080;7081;7082;7083 7079 4184 7 IYIDPFTYEDPNEAVR GHMTPGMKIYIDPFTY EDPNEAVREFAKEIDI K I Y V R E 1 1 1 2 0 0 2 0 0 2 0 0 0 1 2 0 1 0 2 1 0 0 16 0 1940.9156 B1AKC9;P29323;P54762 B1AKC9 590 605 EPHB2;EPHB1 Receptor protein-tyrosine kinase;Ephrin type-B receptor 2;Ephrin type-B receptor 1 yes no 2 1.161E-52 184.1 By MS/MS By MS/MS 1 1 32688000 18868000 13820000 2805 520 3177 7233;7234 7084;7085 7084 8065;8066 2 IYLEENPEKSETIQDTDTQSLVGSPSTR PKSGPKERIYLEENPE LVGSPSTRIAPHIIGA R I Y T R I 0 1 1 2 0 2 4 1 0 2 2 1 0 0 2 4 4 0 1 1 0 0 28 1 3136.5048 Q9NZN5;E9PMR6 Q9NZN5 318 345 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 3 6.8267E-10 105.1 By MS/MS By MS/MS 1 1 78251000 34487000 43764000 2806 2962 3178 7235;7236 7086;7087 7087 6237;6238;7889 2 IYLESEHGSPLTPR AQNTHGLRIYLESEHG HGSPLTPRVGIPSGLG R I Y P R V 0 1 0 0 0 0 2 1 1 1 2 0 0 0 2 2 1 0 1 0 0 0 14 0 1597.81 Q9H165;A0A0J9YXG2 Q9H165 197 210 BCL11A B-cell lymphoma/leukemia 11A yes no 2;3 0.004079 94.487 By MS/MS By MS/MS 3 2 37288000 20492000 16796000 2807 2813 3179;3180 7237;7238;7239;7240;7241 7088;7089;7090;7091;7092 7091 5880;7846 5 IYLYKDGEMIPYGFNNQTK DLKDSQSKIYLYKDGE YGFNNQTKHCLRRLGK K I Y T K H 0 0 2 1 0 1 1 2 0 2 1 2 1 1 1 0 1 0 3 0 0 0 19 1 2293.1089 Q86VF2 Q86VF2 245 263 IGFN1 Immunoglobulin-like and fibronectin type III domain-containing protein 1 yes yes 3 0.025069 41.45 By matching By MS/MS 1 1 31528000 20848000 10680000 2808 2408 3181 7242;7243 7093 7093 976 1 IYNISGNGSPLADSK RTPAAGERIYNISGNG GSPLADSKEIFLTVPV R I Y S K E 1 0 2 1 0 0 0 2 0 2 1 1 0 0 1 3 0 0 1 0 0 0 15 0 1534.7627 Q53HL2 Q53HL2 211 225 CDCA8 Borealin yes yes 2 7.7737E-16 149.31 By MS/MS By MS/MS 2 2 180740000 95823000 84918000 2809 2207 3182;3183 7244;7245;7246;7247 7094;7095;7096 7094 109 4419 3 IYQYIQSR SSCQLGQRIYQYIQSR IYQYIQSRFYRSPEVL R I Y S R F 0 1 0 0 0 2 0 0 0 2 0 0 0 0 0 1 0 0 2 0 0 0 8 0 1069.5556 Q9Y463;Q13627 Q9Y463 270 277 DYRK1B;DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1B;Dual specificity tyrosine-phosphorylation-regulated kinase 1A yes no 2 0.0086764 122.18 By MS/MS By MS/MS 1 1 120410000 65652000 54762000 2810 2074 3184 7248;7249 7097;7098 7098 8333 2 IYSFNSTNDSSGPANLDK PRVKQGPKIYSFNSTN SGPANLDKSILKVVIN K I Y D K S 1 0 3 2 0 0 0 1 0 1 1 1 0 1 1 4 1 0 1 0 0 0 18 0 1928.8752 A0A087WYN9;Q7Z478 A0A087WYN9 66 83 DHX29 ATP-dependent RNA helicase DHX29 yes no 2 2.1865E-06 130.11 By MS/MS By MS/MS 1 1 21735000 9904200 11831000 2811 126 3185 7250;7251 7099;7100;7101 7100 214 3 IYSFTDNAPSPSIGGSSR SIKAEADKIYSFTDNA PSIGGSSRLENTTPTQ K I Y S R L 1 1 1 1 0 0 0 2 0 2 0 0 0 1 2 5 1 0 1 0 0 0 18 0 1854.8748 O15014 O15014 795 812 ZNF609 Zinc finger protein 609 yes yes 2 0.012524 79.92 By MS/MS 1 0 0 0 2812 1466 3186 7252 7102 7102 2727;2728 1 IYSNHSALESLALIPLQAPLK QLDLRRFRIYSNHSAL IPLQAPLKTMLQIGVM R I Y L K T 3 0 1 0 0 1 1 0 1 2 5 1 0 0 2 3 0 0 1 0 0 0 21 0 2277.2733 P55058 P55058 395 415 PLTP Phospholipid transfer protein yes yes 3 0.022939 46.702 By matching By MS/MS 1 1 27381000 13697000 13683000 2813 1906 3187 7253;7254 7103 7103 3686;3687 0 IYSYVVSR QVNTADHRIYSYVVSR IYSYVVSRPQPRGLLG R I Y S R P 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 2 2 0 0 8 0 985.52328 Q96CS3 Q96CS3 78 85 FAF2 FAS-associated factor 2 yes yes 2 0.020142 68.383 By matching By MS/MS 1 1 5260000 3242900 2017200 2814 2631 3188 7255;7256 7104 7104 8418 0 IYSYVVSRPQPR QVNTADHRIYSYVVSR VVSRPQPRGLLGWGYY R I Y P R G 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 2 0 0 2 2 0 0 12 1 1463.7885 Q96CS3 Q96CS3 78 89 FAF2 FAS-associated factor 2 yes yes 2;3 0.0019787 80.916 By MS/MS By MS/MS 2 2 72426000 40580000 31846000 2815 2631 3189 7257;7258;7259;7260 7105;7106;7107 7106 8418 3 IYVVDPFSECCMDISLSPSR RYDAETGRIYVVDPFS DISLSPSRCSEPPPVA R I Y S R C 0 1 0 2 2 0 1 0 0 2 1 0 1 1 2 4 0 0 1 2 0 0 20 0 2374.0643 O14654 O14654 1045 1064 IRS4 Insulin receptor substrate 4 yes yes 2;3 0.00017191 107.35 By MS/MS By MS/MS 2 1 25425000 15325000 10099000 2816 1453 3190 7261;7262;7263 7108;7109 7108 521 8181 2 KAASPSPQSVR TPEPKKIKKAASPSPQ SPSPQSVRRVSSSRSV K K A V R R 2 1 0 0 0 1 0 0 0 0 0 1 0 0 2 3 0 0 0 1 0 0 11 1 1126.6095 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 744 754 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.006874 74.237 By MS/MS By MS/MS 3 5 142680000 74575000 68103000 2817 511 3191;3192;3193 7264;7265;7266;7267;7268;7269;7270;7271 7110;7111;7112;7113;7114 7111 935;936;937 2 KAASTDLGAGETVVGK NRGRRQAKKAASTDLG AGETVVGKVLEITELP K K A G K V 3 0 0 1 0 0 1 3 0 0 1 2 0 0 0 1 2 0 0 2 0 0 16 1 1502.794 Q15032;H7C207 Q15032 970 985 R3HDM1 R3H domain-containing protein 1 yes no 2 2.9065E-31 164.5 By MS/MS By MS/MS 1 1 28217000 14571000 13645000 2818 2120 3194 7272;7273 7115;7116;7117;7118 7116 4188 4 KAAVLSDSEDEEKASAK EEEKVAKRKAAVLSDS DEEKASAKKSRVVSDA R K A A K K 4 0 0 2 0 0 3 0 0 0 1 3 0 0 0 3 0 0 0 1 0 0 17 2 1776.8741 Q96ST2 Q96ST2 393 409 IWS1 Protein IWS1 homolog yes yes 3 0.015146 59.634 By MS/MS By matching 1 1 20869000 16071000 4797600 2819 2711 3195 7274;7275 7119;7120 7120 5595;5596 2 KADTTTPTPTAILAPGSPASPPGSLEPK AKKKGVKRKADTTTPT PPGSLEPKAARLPPMR R K A P K A 4 0 0 1 0 0 1 2 0 1 2 2 0 0 7 3 5 0 0 0 0 0 28 1 2701.4174 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2;H0YDJ7;U3KPW0 H0Y6K2 288 315 BRD2 Bromodomain-containing protein 2 yes no 3 5.4984E-10 95.68 By MS/MS By MS/MS 3 3 195430000 101230000 94199000 2820 353 3196;3197 7276;7277;7278;7279;7280;7281 7121;7122;7123;7124;7125;7126;7127;7128;7129;7130;7131;7132;7133 7128 630;631;632 13 KAEDSDSEPEPEDNVR SPLGGIKRKAEDSDSE PEPEDNVRLWEAGWKQ R K A V R L 1 1 1 3 0 0 4 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 16 1 1815.7759 Q9H0D6 Q9H0D6 495 510 XRN2 5-3 exoribonuclease 2 yes yes 2;3 2.729E-22 157.62 By MS/MS By MS/MS 3 3 352450000 171460000 180990000 2821 2801 3198;3199 7282;7283;7284;7285;7286;7287 7134;7135;7136;7137;7138;7139 7135 5850;5851 6 KAEGEPQEESPLK GSQEKQTKKAEGEPQE PQEESPLKSKSQEEPK K K A L K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 13 1 1440.7096 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 168 180 BCLAF1 Bcl-2-associated transcription factor 1 no no 2 4.4745E-46 198.61 By MS/MS By MS/MS 1 1 423860000 221230000 202620000 2822 2947;888 3200 7288;7289 7140;7141 7141 1651 2 KAEGEPQEESPLKSK GSQEKQTKKAEGEPQE EESPLKSKSQEEPKDT K K A S K S 1 0 0 0 0 1 4 1 0 0 1 3 0 0 2 2 0 0 0 0 0 0 15 2 1655.8366 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 168 182 BCLAF1 Bcl-2-associated transcription factor 1 no no 2;3 1.4015E-33 172.99 By MS/MS By MS/MS 2 2 486160000 253300000 232860000 2823 2947;888 3201 7290;7291;7292;7293 7142;7143;7144;7145 7144 1651 4 KAENAEGQTPAIGPDGEPLDETSQMSDLPVK KKKKKKKKKAENAEGQ QMSDLPVKVIHVESGK K K A V K V 3 0 1 3 0 2 4 3 0 1 2 2 1 0 4 2 2 0 0 1 0 0 31 1 3223.5191 Q9HBD4;A0A0A0MT49;P51532 Q9HBD4 588 618 SMARCA4 Transcription activator BRG1 yes no 3 0.0070345 50.413 By MS/MS By MS/MS 1 2 29989000 9304400 20685000 2824 264 3202;3203 7294;7295;7296 7146;7147 7146 108 459;460;6914 2 KAEPSEVDMNSPK PKAKQVKKKAEPSEVD EVDMNSPKSKKAKKKE K K A P K S 1 0 1 1 0 0 2 0 0 0 0 2 1 0 2 2 0 0 0 1 0 0 13 1 1430.6711 Q9NR30 Q9NR30 61 73 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.026847 59.57 By matching By MS/MS 1 1 35277000 20305000 14972000 2825 2905 3204 7297;7298 7148 7148 1149 6117 1 KAGLASPEEEDAVGKEPLK ALLLAHKKKAGLASPE AVGKEPLKAAPKKRQL K K A L K A 3 0 0 1 0 0 4 2 0 0 2 3 0 0 2 1 0 0 0 1 0 0 19 2 1967.0211 Q9UNS1 Q9UNS1 1144 1162 TIMELESS Protein timeless homolog yes yes 3 0.02941 57.171 By MS/MS 1 8026300 8026300 0 2826 3061 3205 7299 7149 7149 6459 1 KALAAAGYDVEK GVSLAALKKALAAAGY AAGYDVEKNNSRIKLG K K A E K N 4 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 1 1 0 0 12 1 1234.6558 P10412;P16403;P16402;P22492;Q02539 P10412 64 75 HIST1H1E;HIST1H1C;HIST1H1D;HIST1H1T;HIST1H1A Histone H1.4;Histone H1.2;Histone H1.3;Histone H1t;Histone H1.1 yes no 2;3 0.0022877 61.212 By MS/MS By MS/MS 2 2 14879000 8392100 6486800 2827 1674 3206 7300;7301;7302;7303 7150;7151;7152 7150 3 KALVVPEPEPDSDSNQER LGDLLTERKALVVPEP DSDSNQERKDDRERGE R K A E R K 1 1 1 2 0 1 3 0 0 0 1 1 0 0 3 2 0 0 0 2 0 0 18 1 2008.9702 Q5VTR2;C9J0A5;C9JXC9 Q5VTR2 125 142 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 2;3 5.6477E-07 130.73 By MS/MS By MS/MS 2 2 46982000 25218000 21765000 2828 2266 3207 7304;7305;7306;7307 7153;7154;7155;7156;7157;7158 7154 4548;4549 6 KAPAGPSLEETSVSSPK LSPPDWWKKAPAGPSL ETSVSSPKGSSEPCWL K K A P K G 2 0 0 0 0 0 2 1 0 0 1 2 0 0 3 4 1 0 0 1 0 0 17 1 1683.8679 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 476 492 HEATR6 HEAT repeat-containing protein 6 yes no 3 0.0047117 63.894 By MS/MS By MS/MS 1 1 10764000 5392600 5371200 2829 116 3208 7308;7309 7159;7160 7160 203 2 KAPAGQEEPGTPPSSPLSAEQLDR DAAAIPAKKAPAGQEE LSAEQLDRIQRNKAAA K K A D R I 3 1 0 1 0 2 3 2 0 0 2 1 0 0 5 3 1 0 0 0 0 0 24 1 2461.2085 P13051;Q68DM5;F5GYA2 P13051 50 73 UNG;DKFZp781L1143 Uracil-DNA glycosylase yes no 3 2.5091E-13 136.18 By MS/MS By MS/MS 3 3 160700000 79573000 81122000 2830 1691 3209;3210 7310;7311;7312;7313;7314;7315 7161;7162;7163;7164;7165;7166 7166 3188;3189;7397 6 KAPLNIPGTPVLEDFPQNDDEKER VFPMPLPRKAPLNIPG QNDDEKERLQRRRSRV R K A E R L 1 1 2 3 0 1 3 1 0 1 2 2 0 1 4 0 1 0 0 1 0 0 24 2 2721.361 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 30 53 NCAPH Condensin complex subunit 2 yes no 3 0.0053694 62.611 By MS/MS By matching 1 1 14405000 8667300 5737700 2831 634 3211 7316;7317 7167 7167 7013 1 KAPSEISR TTVKEMSKKAPSEISR KAPSEISRKYQSEFEE K K A S R K 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 2 0 0 0 0 0 0 8 1 886.48723 A0A087WV90;E9PDN5;A0A087WTU7;A0A075B6G3;P11532 A0A087WV90 1005 1012 DMD Dystrophin yes no 2 0.016203 81.525 By MS/MS 1 141240000 0 141240000 2832 10 3212 7318 7168 7168 16;17 1 KAPTNEFYA LGKKPIYKKAPTNEFY APTNEFYA________ K K A Y A - 2 0 1 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 9 1 1039.4975 P31431 P31431 190 198 SDC4 Syndecan-4 yes yes 2 0.0010657 91.853 By MS/MS By MS/MS 1 1 14195000 6650000 7544600 2833 1783 3213 7319;7320 7169;7170;7171 7170 8253 3 KASGPPVSELITK KSAGAAKRKASGPPVS PVSELITKAVAASKER R K A T K A 1 0 0 0 0 0 1 1 0 1 1 2 0 0 2 2 1 0 0 1 0 0 13 1 1325.7555 P10412;P16403;P16402 P10412 34 46 HIST1H1E;HIST1H1C;HIST1H1D Histone H1.4;Histone H1.2;Histone H1.3 yes no 2;3 9.2391E-10 138.81 By MS/MS By MS/MS 3 3 70396000 32933000 37463000 2834 1674 3214;3215 7321;7322;7323;7324;7325;7326 7172;7173;7174;7175;7176;7177 7173 3161 4 KASISYFK PETPDNERKASISYFK KASISYFKNQRGIQYI R K A F K N 1 0 0 0 0 0 0 0 0 1 0 2 0 1 0 2 0 0 1 0 0 0 8 1 942.51747 D6RAY8;Q9H4L7 D6RAY8 77 84 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 2 0.016426 80.916 By matching By MS/MS 1 1 10546000 5427200 5119100 2835 747 3216 7327;7328 7178 7178 1353 1 KASPEPEGEAAGK LAPTPRRRKASPEPEG PEGEAAGKMTTEEQQQ R K A G K M 3 0 0 0 0 0 3 2 0 0 0 2 0 0 2 1 0 0 0 0 0 0 13 1 1269.6201 Q8IU81 Q8IU81 382 394 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2 0.019628 68.329 By matching By MS/MS 1 1 10039000 4088900 5949700 2836 2424 3217 7329;7330 7179 7179 4958 1 KASPEPPDSAEGALK AAASLRKRKASPEPPD DSAEGALKLGEEQQRQ R K A L K L 3 0 0 1 0 0 2 1 0 0 1 2 0 0 3 2 0 0 0 0 0 0 15 1 1495.7518 Q9H1B7 Q9H1B7 545 559 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 2 0.00094656 95.751 By MS/MS By MS/MS 1 1 71510000 35947000 35563000 2837 2815 3218 7331;7332 7180;7181 7180 5885 2 KASPPSGLWSPAYASH PNALPPARKASPPSGL WSPAYASH________ R K A S H - 3 0 0 0 0 0 0 1 1 0 1 1 0 0 3 4 0 1 1 0 0 0 16 1 1654.8104 Q8TEM1 Q8TEM1 1872 1887 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2;3 0.0010869 94.339 By MS/MS By MS/MS 2 2 21525000 12137000 9387900 2838 2545 3219 7333;7334;7335;7336 7182;7183;7184;7185;7186;7187 7182 5200 3 KASQLVGIEK VHNSTQKRKASQLVGI SQLVGIEKKFHPDV__ R K A E K K 1 0 0 0 0 1 1 1 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1071.6288 Q9NPD8 Q9NPD8 182 191 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 2 0.010581 77.204 By MS/MS By matching 1 1 14975000 8658900 6316600 2839 2885 3220 7337;7338 7188 7188 6076 1 KASSPSPLTIGTPESQR TRSSDLERKASSPSPL IGTPESQRKPSIILSK R K A Q R K 1 1 0 0 0 1 1 1 0 1 1 1 0 0 3 4 2 0 0 0 0 0 17 1 1754.9163 Q9NPI6 Q9NPI6 520 536 DCP1A mRNA-decapping enzyme 1A yes yes 2;3 0.0022029 70.784 By MS/MS By matching 2 1 10319000 7300700 3018400 2840 2890 3221 7339;7340;7341 7189;7190 7190 6083 2 KASVVDPSTESSPAPQEGSEQPASPASPLSSR QPGSIGSRKASVVDPS PASPLSSRQSFCAQEA R K A S R Q 4 1 0 1 0 2 3 1 0 0 1 1 0 0 6 9 1 0 0 2 0 0 32 1 3179.5218 Q66K14 Q66K14 409 440 TBC1D9B TBC1 domain family member 9B yes yes 3 0.016393 42.341 By MS/MS 1 17128000 17128000 0 2841 2287 3222 7342 7191 7191 4600 1 KAVPMAPAPASPGSSNDSSAR SPCEFEHRKAVPMAPA SSNDSSARSQERAGGL R K A A R S 5 1 1 1 0 0 0 1 0 0 0 1 1 0 4 5 0 0 0 1 0 0 21 1 1996.9636 Q66K74 Q66K74 749 769 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3 0.0088089 61.238 By MS/MS By matching 1 1 6078800 2587800 3491000 2842 2289 3223 7343;7344 7192 7192 4605;4606;4607 0 KAVVLPGGTATSPK LMAASVARKAVVLPGG GGTATSPKMIAKNVLG R K A P K M 2 0 0 0 0 0 0 2 0 0 1 2 0 0 2 1 2 0 0 2 0 0 14 1 1324.7715 Q8N1G0;F8WCX2;H0Y5I5 Q8N1G0 422 435 ZNF687 Zinc finger protein 687 yes no 2 0.0029011 98.253 By MS/MS By MS/MS 1 1 13596000 7578300 6017900 2843 2458 3224 7345;7346 7193;7194 7193 5026;7717 2 KAWESSSR PQDAKLLRKAWESSSR KAWESSSRQKWIVKPV R K A S R Q 1 1 0 0 0 0 1 0 0 0 0 1 0 0 0 3 0 1 0 0 0 0 8 1 949.46174 H7C2S3;H7C421;H7BZY4;E9PH58;Q14679 H7C2S3 76 83 TTLL4 Tubulin polyglutamylase TTLL4 yes no 2 0.018562 53.597 By MS/MS 1 0 0 0 2844 877 3225 7347 7195 7195 1622;1623 1 KCSLPAEEDSVLEK ETVTGTGKKCSLPAEE EEDSVLEKLGERKPCN K K C E K L 1 0 0 1 1 0 3 0 0 0 2 2 0 0 1 2 0 0 0 1 0 0 14 1 1603.7763 E7EVA0;P27816 E7EVA0 651 664 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 0.00021476 119.96 By MS/MS By MS/MS 2 2 65699000 35690000 30009000 2845 828 3226 7348;7349;7350;7351 7196;7197;7198;7199 7197 1537 4 KDAPISPASIASSSSTPSSK LDKTRLLKKDAPISPA SSSTPSSKSKELSLNE K K D S K S 3 0 0 1 0 0 0 0 0 2 0 2 0 0 3 8 1 0 0 0 0 0 20 1 1916.9691 Q04727;H0Y5S0;H7C4E4 Q04727 287 306 TLE4 Transducin-like enhancer protein 4 yes no 2 0.027113 45.207 By MS/MS 1 5035400 0 5035400 2846 1999 3227 7352 7200 7200 3850;3851;3852;3853;3854;3855 0 KDDDSDDESQSSHTGK KKVKKKGRKDDDSDDE SQSSHTGKKKPEISFM R K D G K K 0 0 0 5 0 1 1 1 1 0 0 2 0 0 0 4 1 0 0 0 0 0 16 1 1749.6925 O94874 O94874 454 469 UFL1 E3 UFM1-protein ligase 1 yes yes 3 0.00031371 93.029 By MS/MS By MS/MS 1 1 24673000 18611000 6062000 2847 1572 3228 7353;7354 7201;7202 7201 2978 2 KDDSDDDGGGWITPSNIK EENGFEDRKDDSDDDG WITPSNIKQIQQELEQ R K D I K Q 0 0 1 5 0 0 0 3 0 2 0 2 0 0 1 2 1 1 0 0 0 0 18 1 1918.8545 Q9ULX3 Q9ULX3 198 215 NOB1 RNA-binding protein NOB1 yes yes 2;3 3.076E-164 254.24 By MS/MS By MS/MS 2 2 427530000 207340000 220200000 2848 3051 3229 7355;7356;7357;7358 7203;7204;7205;7206 7206 6437 4 KDINAVSIDMLLIVHSEK ________________ LLIVHSEKRRAAQGTL K K D E K R 1 0 1 2 0 0 1 0 1 3 2 2 1 0 0 2 0 0 0 2 0 0 18 1 2024.0976 B4DGA7;Q8NBH2 B4DGA7 5 22 KY Kyphoscoliosis peptidase yes no 2 0.032074 40.373 By MS/MS 1 0 0 0 2849 549 3230 7359 7207 7207 217 1 KDLGSTEDGDGTDDFLTDKEDEK YPPELFTRKDLGSTED LTDKEDEKAKPPREKA R K D E K A 0 0 0 7 0 0 3 3 0 0 2 3 0 1 0 1 3 0 0 0 0 0 23 2 2529.0878 Q15527 Q15527 179 201 SURF2 Surfeit locus protein 2 yes yes 3 0.022546 53.718 By MS/MS 1 9551900 0 9551900 2850 2144 3231 7360 7208 7208 4255;7601;7602 1 KDLYANTVLSGGTTMYPGIADR MKCDVDIRKDLYANTV MYPGIADRMQKEITAL R K D D R M 2 1 1 2 0 0 0 3 0 1 2 1 1 0 1 1 3 0 2 1 0 0 22 1 2342.1576 P63261;P60709 P63261 291 312 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2;3 1.2781E-47 178.45 By MS/MS By MS/MS 3 3 163750000 91902000 71851000 2851 1928 3232;3233 7361;7362;7363;7364;7365;7366 7209;7210;7211;7212;7213;7214;7215 7215 751 7 KDNEESEQPPVPGTPTLR IDFGSLLKKDNEESEQ VPGTPTLRNRTFSESS K K D L R N 0 1 1 1 0 1 3 1 0 0 1 1 0 0 4 1 2 0 0 1 0 0 18 1 1992.9752 O15439 O15439 633 650 ABCC4 Multidrug resistance-associated protein 4 yes yes 3 0.00097079 93.342 By MS/MS 1 24830000 0 24830000 2852 1481 3234 7367 7216 7216 7308 1 KDQMIESQR HQLLELEKKDQMIESQ DQMIESQRGQVQDLKK K K D Q R G 0 1 0 1 0 2 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 9 1 1133.5499 H7C0P0;Q9BV73 H7C0P0 22 30 CEP250 Centrosome-associated protein CEP250 yes no 3 0.016491 58.246 By MS/MS 1 36325000 0 36325000 2853 1271 3235 7368 7217 7217 0 KDSDTESSDLFTNLNLGR EEEEDEGRKDSDTESS FTNLNLGRTYASGYAH R K D G R T 0 1 2 3 0 0 1 1 0 0 3 1 0 1 0 3 2 0 0 0 0 0 18 1 2010.9494 Q9Y3S2 Q9Y3S2 289 306 ZNF330 Zinc finger protein 330 yes yes 2;3 0.00029182 118.23 By MS/MS By MS/MS 2 2 21570000 12668000 8902400 2854 3111 3236 7369;7370;7371;7372 7218;7219;7220;7221;7222 7219 6668;6669;7946 5 KDSEEEVSLLGSQDIEEGNHQVEDGCR RSGYTLIRKDSEEEVS HQVEDGCREMACEEFN R K D C R E 0 1 1 3 1 2 6 3 1 1 2 1 0 0 0 3 0 0 0 2 0 0 27 1 3058.3422 Q9Y487 Q9Y487 693 719 ATP6V0A2 V-type proton ATPase 116 kDa subunit a isoform 2 yes yes 3 1.4302E-21 144.63 By MS/MS By MS/MS 1 1 50610000 26186000 24424000 2855 3116 3237 7373;7374 7223;7224 7224 6678 2 KDSIDPYIYTPFGTGPR RPERFSKKKDSIDPYI TPFGTGPRNCIGMRFA K K D P R N 0 1 0 2 0 0 0 2 0 2 0 1 0 1 3 1 2 0 2 0 0 0 17 1 1925.9523 P20815 P20815 423 439 CYP3A5 Cytochrome P450 3A5 yes yes 3 0.028397 41.386 By matching By MS/MS 1 1 9405300 5773600 3631700 2856 1740 3238 7375;7376 7225 7225 3277 1 KDSIPQVLLPEEEK QGHGSSTRKDSIPQVL VLLPEEEKLIIEETRS R K D E K L 0 0 0 1 0 1 3 0 0 1 2 2 0 0 2 1 0 0 0 1 0 0 14 1 1623.872 Q15052 Q15052 682 695 ARHGEF6 Rho guanine nucleotide exchange factor 6 yes yes 2 0.0020091 89.502 By MS/MS By MS/MS 1 1 10686000 4427000 6259000 2857 2123 3239 7377;7378 7226;7227 7227 4198 2 KDSLESDSSTAIIPHELIR AHDRAPSRKDSLESDS IIPHELIRTRQLESVH R K D I R T 1 1 0 2 0 0 2 0 1 3 2 1 0 0 1 4 1 0 0 0 0 0 19 1 2110.0906 Q9UMX1 Q9UMX1 344 362 SUFU Suppressor of fused homolog yes yes 3 0.0001083 104.45 By MS/MS By MS/MS 1 1 26616000 14264000 12351000 2858 3055 3240 7379;7380 7228;7229;7230 7230 6448;6449 3 KDSLTQAQEQGNLLN MGVHHLHRKDSLTQAQ QEQGNLLN________ R K D L N - 1 0 2 1 0 3 1 1 0 0 3 1 0 0 0 1 1 0 0 0 0 0 15 1 1657.8271 Q5JTD0 Q5JTD0 543 557 TJAP1 Tight junction-associated protein 1 yes yes 2 7.5386E-11 142.4 By MS/MS By MS/MS 1 1 141400000 66666000 74735000 2859 2222 3241 7381;7382 7231;7232 7232 4451 2 KDSSSVVEWTQAPK SSSILYARKDSSSVVE VEWTQAPKERGHRGSE R K D P K E 1 0 0 1 0 1 1 0 0 0 0 2 0 0 1 3 1 1 0 2 0 0 14 1 1560.7784 Q8TC07;F8WCB5 Q8TC07 68 81 TBC1D15 TBC1 domain family member 15 yes no 2;3 3.478E-11 142.4 By MS/MS By MS/MS 2 2 37810000 19353000 18457000 2860 2535 3242 7383;7384;7385;7386 7233;7234;7235;7236 7236 5174;5175;5176 4 KDTETVYSEVRK ESHKDLGKKDTETVYS TVYSEVRKAVPDAVES K K D R K A 0 1 0 1 0 0 2 0 0 0 0 2 0 0 0 1 2 0 1 2 0 0 12 2 1453.7413 A0A075B738;P16284 A0A075B738 707 718 PECAM1 Platelet endothelial cell adhesion molecule yes no 2 0.015919 67.456 By MS/MS 1 3641100 3641100 0 2861 16 3243 7387 7237 7237 27;7975 0 KDTNKDEEECNEPK NKGDDKKKKDTNKDEE EEECNEPKGDPEMAPI K K D P K G 0 0 2 2 1 0 4 0 0 0 0 3 0 0 1 0 1 0 0 0 0 0 14 2 1734.7367 A0A087X2H1;Q9ULT8;G3V4V5 A0A087X2H1 498 511 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes no 2 0.030996 48.981 By MS/MS 1 0 0 0 2862 176 3244 7388 7238 7238 1 KDYDTLSK IERSNVVRKDYDTLSK KDYDTLSKCSPKMPPA R K D S K C 0 0 0 2 0 0 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 8 1 968.48148 Q9UHR4 Q9UHR4 272 279 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 2.2893E-05 156.75 By MS/MS By MS/MS 3 3 23551000 17119000 6431800 2863 3006 3245 7389;7390;7391;7392;7393;7394 7239;7240;7241;7242 7241 8492 4 KEEADYSAFGTDTLIK LLRIFIQKKEEADYSA FGTDTLIKKKNVLTNV K K E I K K 2 0 0 2 0 0 2 1 0 1 1 2 0 1 0 1 2 0 1 0 0 0 16 1 1786.8625 Q9BYG5 Q9BYG5 96 111 PARD6B Partitioning defective 6 homolog beta yes yes 2 0.0030297 83.243 By matching By MS/MS 1 1 10519000 5315500 5203600 2864 2778 3246 7395;7396 7243 7243 5782 1 KEEENADSDDEGELQDLLSQDWR LTIKELQKKEEENADS DLLSQDWRVKGALL__ K K E W R V 1 1 1 5 0 2 5 1 0 0 3 1 0 0 0 2 0 1 0 0 0 0 23 1 2720.1685 J3QQQ3;Q96NB3 J3QQQ3 78 100 ZNF830 Zinc finger protein 830 yes no 3 3.6364E-05 105.25 By MS/MS 1 35523000 0 35523000 2865 1351 3247 7397 7244 7244 2496 1 KEELGASSPSYGPPNLGFVDSPSSGTHLGGLELK SRKALEVKKEELGASS HLGGLELKTPDVFKAP K K E L K T 1 0 1 1 0 0 3 6 1 0 5 2 0 1 4 6 1 0 1 1 0 0 34 1 3426.6943 O14686 O14686 2289 2322 KMT2D Histone-lysine N-methyltransferase 2D yes yes 3;4 1.0103E-06 73.685 By MS/MS By matching 2 2 34063000 20001000 14062000 2866 1454 3248 7398;7399;7400;7401 7245;7246 7245 2698;2699;2700;8185 2 KEEPSQNDISPK PKSKKAKKKEEPSQND SQNDISPKTKSLRKKK K K E P K T 0 0 1 1 0 1 2 0 0 1 0 2 0 0 2 2 0 0 0 0 0 0 12 1 1370.6678 Q9NR30 Q9NR30 80 91 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.00072972 109.1 By MS/MS By MS/MS 1 1 15788000 6274300 9513500 2867 2905 3249 7402;7403 7247;7248;7249;7250 7247 6118 4 KEESEESDDDMGFGLFD AEEKKDEKKEESEESD DMGFGLFD________ K K E F D - 0 0 0 4 0 0 4 2 0 0 1 1 1 2 0 2 0 0 0 0 0 0 17 1 1948.752 P05387;H0YDD8;P05386 P05387 99 115 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 yes no 2;3 0.0069656 82.755 By MS/MS By MS/MS 1 2 0 0 0 2868 1641 3250;3251;3252 7404;7405;7406 7251;7252;7253 7251 594 3094 3 KEESPPPPK KPLPPTVKKEESPPPP EESPPPPKVVNPLIGL K K E P K V 0 0 0 0 0 0 2 0 0 0 0 2 0 0 4 1 0 0 0 0 0 0 9 1 1007.5288 E9PGM9;P78332 E9PGM9 756 764 RBM6 RNA-binding protein 6 yes no 2 0.0061391 86.911 By MS/MS 1 6180700 6180700 0 2869 874 3253 7407 7254 7254 1618 1 KEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK KYRELLAKKEGITGPP GSPTAAGKKTEKEEST K K E G K K 5 0 0 5 1 0 1 5 0 3 1 3 0 1 5 5 3 0 0 0 0 0 38 2 3729.768 H0YA91;E9PDE4;E7ES10;E7EVY3;B7Z574;A0A0C4DGB5;P20810 H0YA91 229 266 CAST Calpastatin yes no 4 0.01045 43.803 By MS/MS By matching 1 1 15767000 8292400 7475100 2870 313 3254 7408;7409 7255 7255 548 1 KEKPELSEPSHLNGPSSDPEAAFLSR VLPAVIPKKEKPELSE PEAAFLSRDVDDGSGS K K E S R D 2 1 1 1 0 0 4 1 1 0 3 2 0 1 4 5 0 0 0 0 0 0 26 2 2821.3883 F5GWT4;Q9H4A3 F5GWT4 1748 1773 WNK1 Serine/threonine-protein kinase WNK1 yes no 4 0.0063278 52.272 By MS/MS By MS/MS 1 1 59338000 34886000 24452000 2871 941 3255 7410;7411 7256;7257;7258 7257 1764;1765;1766 3 KELGPLPDDDDMASPK EKLLKEKRKELGPLPD DDDMASPKLKLSRKSG R K E P K L 1 0 0 4 0 0 1 1 0 0 2 2 1 0 3 1 0 0 0 0 0 0 16 1 1726.8084 E7EVG2;Q86U86;H0Y5B5 E7EVG2 623 638 PBRM1 Protein polybromo-1 yes no 2 0.017352 62.528 By MS/MS 1 3024400 3024400 0 2872 829 3256 7412 7259 7259 315 1544 1 KENPSPLFSIK PVDDKEQRKENPSPLF PSPLFSIKKTKQLRSE R K E I K K 0 0 1 0 0 0 1 0 0 1 1 2 0 1 2 2 0 0 0 0 0 0 11 1 1258.6921 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 810 820 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 1.6197E-10 115.09 By MS/MS By matching 1 1 11010000 5667000 5342600 2873 371 3257 7413;7414 7260 7260 686 0 KEQLLEDSTEDLDYGFLSNYKLLNTAITR HKQTPIKKKEQLLEDS LLNTAITRAQSLVAVV K K E T R A 1 1 2 3 0 1 3 1 0 1 6 2 0 1 0 2 3 0 2 0 0 0 29 2 3388.7038 J3QS41;P42694 J3QS41 1013 1041 HELZ Probable helicase with zinc finger domain yes no 3 0.025336 47.237 By MS/MS 1 4820600 0 4820600 2874 1359 3258 7415 7261 7261 2509 0 KESALSIFPK K E P K 1 0 0 0 0 0 1 0 0 1 1 2 0 1 1 2 0 0 0 0 0 0 10 1 1118.6336 REV__F5GYF8 yes no 1 0.032356 50.149 By MS/MS By matching 2 1 39189000 26779000 12410000 + 2875 3181 3259 7416;7417;7418 7262 7262 1 KESAPQVLLPEEEK MGSTSRSRKESAPQVL VLLPEEEKIIVEETKS R K E E K I 1 0 0 0 0 1 4 0 0 0 2 2 0 0 2 1 0 0 0 1 0 0 14 1 1595.8407 B1ALK7 B1ALK7 617 630 ARHGEF7 yes yes 2 0.0047568 82.942 By MS/MS By matching 1 1 20349000 9939700 10409000 2876 527 3260 7419;7420 7263 7263 988 1 KESESEDSSDDEPLIK KKNQNSSKKESESEDS SDDEPLIKKLKKPPTD K K E I K K 0 0 0 3 0 0 4 0 0 1 1 2 0 0 1 4 0 0 0 0 0 0 16 1 1806.8007 B4DFG0;P35659;H0Y993 B4DFG0 271 286 DEK Protein DEK yes no 2 0.030146 49.463 By MS/MS By MS/MS 1 2 0 0 0 2877 548 3261 7421;7422;7423 7264;7265;7266 7265 3 KESIIKSEGELLER EKPSLPPRKESIIKSE SEGELLERERERQRTE R K E E R E 0 1 0 0 0 0 4 1 0 2 2 2 0 0 0 2 0 0 0 0 0 0 14 2 1629.8938 A1X283 A1X283 526 539 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 3 0.022745 64.52 By MS/MS By matching 1 1 17781000 11739000 6041900 2878 446 3262 7424;7425 7267 7267 833 1 KESKGPIVPLNVADQK TATQPLLKKESKGPIV PLNVADQKLLEASTQF K K E Q K L 1 0 1 1 0 1 1 1 0 1 1 3 0 0 2 1 0 0 0 2 0 0 16 2 1721.9676 G3XAL9;P55011 G3XAL9 992 1007 SLC12A2 Solute carrier family 12 member 2 yes no 2;3 0.019114 71.558 By MS/MS By MS/MS 2 2 44927000 27832000 17094000 2879 1092 3263 7426;7427;7428;7429 7268;7269 7269 2053 2 KESYSIYVYK GKKRKRGRKESYSIYV SYSIYVYKVLKQVHPD R K E Y K V 0 0 0 0 0 0 1 0 0 1 0 2 0 0 0 2 0 0 3 1 0 0 10 1 1278.6496 Q8N257;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03 Q8N257 35 44 HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST2H2BD;HIST2H2BC Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C yes no 2 0.025465 71.085 By MS/MS 1 0 0 0 2880 1648 3264 7430 7270 7270 3113 1 KETEKQLQEAEQEMEEMK LRSTEANKKETEKQLQ EQEMEEMKEKMRKFAK K K E M K E 1 0 0 0 0 3 7 0 0 0 1 3 2 0 0 0 1 0 0 0 0 0 18 2 2237.0192 Q14789;E7EU81 Q14789 1658 1675 GOLGB1 Golgin subfamily B member 1 yes no 3 0.018862 44.734 By MS/MS 1 15104000 15104000 0 2881 2108 3265 7431 7271 7271 1 KETESEAEDNLDDLEK PVAAPEPKKETESEAE DNLDDLEKHLREKALR K K E E K H 1 0 1 3 0 0 5 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 16 1 1863.8222 A9Z1X7;Q8IYB3 A9Z1X7 879 894 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 4.4181E-142 245.12 By MS/MS By MS/MS 7 7 2841200000 1373700000 1467500000 2882 511 3266;3267 7432;7433;7434;7435;7436;7437;7438;7439;7440;7441;7442;7443;7444;7445 7272;7273;7274;7275;7276;7277;7278;7279;7280;7281;7282;7283;7284 7275 942;6973 13 KETPPKEVK KEPKKEVKKETPPKEV ETPPKEVKKEVKKEEK K K E V K K 0 0 0 0 0 0 2 0 0 0 0 3 0 0 2 0 1 0 0 1 0 0 9 2 1054.6023 P46821 P46821 702 710 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0030702 91.701 By MS/MS By MS/MS 1 2 2824900 1795200 1029700 2883 1840 3268 7446;7447;7448 7285;7286 7285 7451 1 KETPPPLVPPAAR ________________ PLVPPAAREWNLPPNA R K E A R E 2 1 0 0 0 0 1 0 0 0 1 1 0 0 5 0 1 0 0 1 0 0 13 1 1371.7874 Q9BQA1 Q9BQA1 3 15 WDR77 Methylosome protein 50 yes yes 3 0.022818 50.653 By MS/MS By MS/MS 1 1 12686000 0 12686000 2884 2740 3269 7449;7450 7287;7288 7288 7822 1 KETPSAPAK LQEENLTRKETPSAPA ETPSAPAKGVEELESL R K E A K G 2 0 0 0 0 0 1 0 0 0 0 2 0 0 2 1 1 0 0 0 0 0 9 1 927.50255 P49454 P49454 1635 1643 CENPF Centromere protein F yes yes 2 0.023587 61.958 By matching By MS/MS 1 1 5043400 831450 4212000 2885 1854 3270 7451;7452 7289 7289 0 KETQSPEQVK NSERITVKKETQSPEQ TQSPEQVKSEKLKDLF K K E V K S 0 0 0 0 0 2 2 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 1 1172.6037 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 492 501 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 3.6764E-11 120.53 By MS/MS By MS/MS 1 1 7304500 0 7304500 2886 2947 3271 7453;7454 7290;7291 7291 6214 1 KETSSCQDPVPINHK NHSPLDSKKETSSCQD DPVPINHKRRSLCSRE K K E H K R 0 0 1 1 1 1 1 0 1 1 0 2 0 0 2 2 1 0 0 1 0 0 15 1 1738.8308 Q2M3C7 Q2M3C7 1403 1417 SPHKAP A-kinase anchor protein SPHKAP yes yes 3 0.023285 41.56 By MS/MS 1 2613300 2613300 0 2887 2180 3272 7455 7292 7292 4334 1 KEVSPEVVR KREEIIIKKEVSPEVV EVSPEVVRSKLSPSPS K K E V R S 0 1 0 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 9 1 1041.5819 Q5T200;A0A087WX14 Q5T200 195 203 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.0053177 105.2 By MS/MS By MS/MS 1 1 98145000 55848000 42297000 2888 2238 3273 7456;7457 7293;7294 7294 4473 2 KFELLPTPPLSPSRR APSEDIWKKFELLPTP PPLSPSRRSGLCSPSY K K F R R S 0 2 0 0 0 0 1 0 0 0 3 1 0 1 4 2 1 0 0 0 0 0 15 2 1736.9937 H0YBG3;A0A0B4J1R1;H0YBT0;A0A087WUS5;P01106 H0YBG3 66 80 MYC Myc proto-oncogene protein yes no 3 0.0071362 76.051 By MS/MS By MS/MS 2 2 36125000 20208000 15917000 2889 59 3274;3275 7458;7459;7460;7461 7295;7296 7295 101;102;6846 2 KFGYVDFESAEDLEK DVRIGMTRKFGYVDFE ESAEDLEKALELTGLK R K F E K A 1 0 0 2 0 0 3 1 0 0 1 2 0 2 0 1 0 0 1 1 0 0 15 1 1775.8254 P19338 P19338 348 362 NCL Nucleolin yes yes 3 0.00028419 74.338 By MS/MS By MS/MS 1 1 8877500 4322900 4554700 2890 1732 3276 7462;7463 7297;7298 7298 2 KFQEQECPPSPEPTR HELVRVIRKFQEQECP PPSPEPTRKEKDKKGC R K F T R K 0 1 0 0 1 2 3 0 0 0 0 1 0 1 4 1 1 0 0 0 0 0 15 1 1828.8414 P62070 P62070 177 191 RRAS2 Ras-related protein R-Ras2 yes yes 2;3 0.0021186 75.319 By MS/MS By matching 2 2 50071000 29378000 20693000 2891 1933 3277 7464;7465;7466;7467 7299;7300 7299 3729;7502 1 KFSGFSAKPNNSGEAPSSPTPK FVTSTNPRKFSGFSAK APSSPTPKRSLSSSKC R K F P K R 2 0 2 0 0 0 1 2 0 0 0 3 0 2 4 5 1 0 0 0 0 0 22 2 2234.0968 P49916;K7ENR9;K7ERZ5 P49916 225 246 LIG3 DNA ligase 3 yes no 3 0.0034783 68.961 By MS/MS By MS/MS 1 1 64173000 34327000 29846000 2892 1865 3278 7468;7469 7301;7302 7301 3619;3620 2 KFSLDELAGPGAEGPSNLK NKELRTKRKFSLDELA AEGPSNLKSKINKVSC R K F L K S 2 0 1 1 0 0 2 3 0 0 3 2 0 1 2 2 0 0 0 0 0 0 19 1 1928.9844 C9J858;O76064 C9J858 98 116 RNF8 E3 ubiquitin-protein ligase RNF8 yes no 2;3 0.0001589 121.46 By MS/MS By MS/MS 2 2 41439000 23567000 17873000 2893 644 3279 7470;7471;7472;7473 7303;7304;7305 7303 1202 3 KGAAEEAELEDSDDEEKPVK NFISAGLKKGAAEEAE DDEEKPVKQDDFPKDF K K G V K Q 3 0 0 3 0 0 6 1 0 0 1 3 0 0 1 1 0 0 0 1 0 0 20 2 2188.0019 Q9UBB9;F6XM96 Q9UBB9 87 106 TFIP11 Tuftelin-interacting protein 11 yes no 3 0.00049125 107.09 By MS/MS 1 13985000 0 13985000 2894 2988 3280 7474 7306 7306 6287 1 KGAAPTPPGK APAKESPRKGAAPTPP AAPTPPGKTGPSAAQA R K G G K T 2 0 0 0 0 0 0 2 0 0 0 2 0 0 3 0 1 0 0 0 0 0 10 1 922.52362 J3KQ96;E7ETY2;H0YAB7;Q13428 J3KQ96 909 918 TCOF1 Treacle protein no no 2 0.02268 61.532 By MS/MS 1 9430600 0 9430600 2895 822;2059 3281 7475 7307 7307 0 KGAGDGSDEEVDGK VVPRRMARKGAGDGSD SDEEVDGKADGAEAKP R K G G K A 1 0 0 3 0 0 2 4 0 0 0 2 0 0 0 1 0 0 0 1 0 0 14 1 1362.5899 P35579 P35579 1937 1950 MYH9 Myosin-9 yes yes 2 3.5919E-66 202.79 By MS/MS By MS/MS 1 2 71805000 33296000 38509000 2896 1795 3282 7476;7477;7478 7308;7309;7310;7311;7312;7313;7314;7315;7316;7317;7318;7319 7313 3390 11 KGAILSEEELAAMSPTAAAVAK DLLSATKRKGAILSEE PTAAAVAKIVKPGMKL R K G A K I 7 0 0 0 0 0 3 1 0 1 2 2 1 0 1 2 1 0 0 1 0 0 22 1 2157.1351 P12270 P12270 366 387 TPR Nucleoprotein TPR yes yes 2;3 0.00061216 83.359 By MS/MS By MS/MS 1 2 31115000 15679000 15437000 2897 1686 3283 7479;7480;7481 7320;7321 7320 624 3183;7388 2 KGEEVTPISAIR DEEEDKRRKGEEVTPI VTPISAIRHEGKTDSE R K G I R H 1 1 0 0 0 0 2 1 0 2 0 1 0 0 1 1 1 0 0 1 0 0 12 1 1298.7194 A8K968;A0A0A0MRA8;A0A0A0MSA4;A0A0J9YW26;A0A1B0GTF8;Q9Y2J2;A0A0J9YY18;A0A0J9YW31;A0A0J9YWN0;A0A0J9YWE1;A0A0J9YWS4 A8K968 396 407 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 2 0.0065942 91.969 By MS/MS By matching 1 1 20557000 12396000 8160600 2898 205 3284 7482;7483 7322 7322 6886 1 KGGEFDEFVNDDTDDDLPISK GGGGRRSKKGGEFDEF DDDLPISKKKKRRKGS K K G S K K 0 0 1 6 0 0 2 2 0 1 1 2 0 2 1 1 1 0 0 1 0 0 21 1 2355.039 Q6PD62 Q6PD62 913 933 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 2;3 4.0669E-17 148.49 By MS/MS By MS/MS 2 2 362820000 181870000 180950000 2899 2327 3285 7484;7485;7486;7487 7323;7324;7325;7326 7323 7666 4 KGGEFDEFVNDDTDDDLPISKK GGGGRRSKKGGEFDEF DDLPISKKKKRRKGSG K K G K K K 0 0 1 6 0 0 2 2 0 1 1 3 0 2 1 1 1 0 0 1 0 0 22 2 2483.134 Q6PD62 Q6PD62 913 934 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 3 0.0016361 74.381 By MS/MS By MS/MS 1 1 26601000 12530000 14072000 2900 2327 3286 7488;7489 7327;7328 7327 7666 2 KGGSYSQAASSDSAQGSDVSLTACKV WRRKSSDRKGGSYSQA VSLTACKV________ R K G K V - 4 0 0 2 1 2 0 3 0 0 1 2 0 0 0 7 1 0 1 2 0 0 26 2 2560.1711 A0A140T9I0;A0A140T9X5;A0A140T913;Q09160;P30447;P10316;P05534;P01892;P01891 A0A140T9I0 340 365 HLA-A HLA class I histocompatibility antigen, A-80 alpha chain;HLA class I histocompatibility antigen, A-23 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-24 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain yes no 3 0.019725 49.186 By MS/MS 1 5802900 5802900 0 2901 404 3287 7490 7329 7329 745;746 1 KGLEFPMTDLDMLSPIHTPQR TIYEDLRRKGLEFPMT SPIHTPQRTVFNSETQ R K G Q R T 0 1 0 2 0 1 1 1 1 1 3 1 2 1 3 1 2 0 0 0 0 0 21 1 2425.2134 O60784;V9GYF4;B0QY02;B0QY01 O60784 147 167 TOM1 Target of Myb protein 1 yes no 3 0.0050156 55.206 By matching By MS/MS 1 1 21720000 10517000 11203000 2902 1527 3288 7491;7492 7330 7330 552;553 2884 1 KGLPLGSAVSSPVLFSPVGR STPRTASRKGLPLGSA VLFSPVGRRSSLSSRG R K G G R R 1 1 0 0 0 0 0 3 0 0 3 1 0 1 3 4 0 0 0 3 0 0 20 1 1967.1204 Q8WUM0 Q8WUM0 35 54 NUP133 Nuclear pore complex protein Nup133 yes yes 2;3 7.2629E-11 135.84 By MS/MS By MS/MS 4 4 99822000 57045000 42776000 2903 2555 3289;3290 7493;7494;7495;7496;7497;7498;7499;7500 7331;7332;7333;7334;7335;7336;7337;7338;7339 7334 5217;5218;5219 9 KGPGQPSSPQR ARGGGKGRKGPGQPSS GQPSSPQRLDRLSGLA R K G Q R L 0 1 0 0 0 2 0 2 0 0 0 1 0 0 3 2 0 0 0 0 0 0 11 1 1137.5891 O95400 O95400 188 198 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 2 0.00066807 112.02 By MS/MS 1 22279000 22279000 0 2904 1594 3291 7501 7340;7341 7341 3019;3020 2 KGPRTPSPPPPIPEDIALGK SKTNQSKKKGPRTPSP PEDIALGKKYKEKYKV K K G G K K 1 1 0 1 0 0 1 2 0 2 1 2 0 0 7 1 1 0 0 0 0 0 20 2 2066.1524 Q5T200 Q5T200 259 278 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 0.00043819 87.157 By MS/MS By MS/MS 1 1 15010000 7594000 7416400 2905 2238 3292 7502;7503 7342;7343;7344 7342 4475;7644 3 KGQGGAGAGDDEEED RVKRKNAKKGQGGAGA AGDDEEED________ K K G E D - 2 0 0 3 0 1 3 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 15 1 1433.5543 A0A024R4M0;P46781 A0A024R4M0 180 194 RPS9 40S ribosomal protein S9 yes no 2 0.014278 64.439 By MS/MS By matching 2 1 22373000 5342600 17031000 2906 3 3293 7504;7505;7506 7345;7346 7345 2 KGSDDAPYSPTAR FKSRSKKRKGSDDAPY APYSPTARVGPSVPRQ R K G A R V 2 1 0 2 0 0 0 1 0 0 0 1 0 0 2 2 1 0 1 0 0 0 13 1 1363.6368 O75151;E7ET14;A0A087WW48 O75151 897 909 PHF2 Lysine-specific demethylase PHF2 yes no 2 0.026916 64.565 By matching By MS/MS 1 1 17279000 9825200 7453800 2907 1537 3294 7507;7508 7347 7347 2905 1 KGSDSDTDASNLETPR HNGGGGGKKGSDSDTD ASNLETPRSESPDLIL K K G P R S 1 1 1 3 0 0 1 1 0 0 1 1 0 0 1 3 2 0 0 0 0 0 16 1 1691.7598 P0CG40 P0CG40 422 437 SP9 Transcription factor Sp9 yes yes 2 0.0014912 97.69 By MS/MS By MS/MS 1 1 15554000 8202500 7351900 2908 1669 3295 7509;7510 7348;7349 7349 3150;3151 0 KGSFSALVGR ________________ SFSALVGRTNGLTKPA R K G G R T 1 1 0 0 0 0 0 2 0 0 1 1 0 1 0 2 0 0 0 1 0 0 10 1 1020.5716 A0A087WWN2;Q13619 A0A087WWN2 8 17 CUL4A Cullin-4A yes no 2 0.014356 73.273 By MS/MS By MS/MS 1 1 19194000 8981500 10212000 2909 93 3296 7511;7512 7350;7351 7350 169 2 KGSITEYTAAEEK PKTTEVIRKGSITEYT EYTAAEEKEDGRRWRM R K G E K E 2 0 0 0 0 0 3 1 0 1 0 2 0 0 0 1 2 0 1 0 0 0 13 1 1425.6987 J3KN59;Q12982 J3KN59 233 245 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 yes no 2 0.00011217 119.51 By MS/MS By MS/MS 1 1 8190100 0 8190100 2910 1319 3297 7513;7514 7352;7353 7352 2447 2 KGSKVGDFGDAINWPTPGEIAHK RAAVPKQRKGSKVGDF TPGEIAHKSVQPQSHK R K G H K S 2 0 1 2 0 0 1 4 1 2 0 3 0 1 2 1 1 1 0 1 0 0 23 2 2423.2234 Q6PKG0;A0A0B4J210;H0YAX9 Q6PKG0 163 185 LARP1 La-related protein 1 yes no 4 0.0013886 67.285 By MS/MS 1 7041600 0 7041600 2911 2330 3298 7515 7354;7355 7354 4697 2 KGSPVSEIGWETPPPESPR REATPYVKKGSPVSEI TPPPESPRLGGSTSDP K K G P R L 0 1 0 0 0 0 3 2 0 1 0 1 0 0 5 3 1 1 0 1 0 0 19 1 2049.0167 Q13884 Q13884 203 221 SNTB1 Beta-1-syntrophin yes yes 3 0.00053214 79.332 By MS/MS 1 4451800 4451800 0 2912 2079 3299 7516 7356;7357;7358 7357 4097 3 KGSSGNASEVSVACLTER IPSIERSRKGSSGNAS SVACLTERIHQMEENQ R K G E R I 2 1 1 0 1 0 2 2 0 0 1 1 0 0 0 4 1 0 0 2 0 0 18 1 1850.8792 Q69YQ0;F8WAN1;C9J8U1 Q69YQ0 382 399 SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 2;3 8.236E-05 121.21 By MS/MS By MS/MS 2 2 65550000 37879000 27671000 2913 2299 3300 7517;7518;7519;7520 7359;7360;7361 7360 4629;4630 3 KGSSTDISEDWEK STPSNNGKKGSSTDIS DISEDWEKDFDLDMTE K K G E K D 0 0 0 2 0 0 2 1 0 1 0 2 0 0 0 3 1 1 0 0 0 0 13 1 1480.6682 Q9NW68 Q9NW68 385 397 BSDC1 BSD domain-containing protein 1 yes yes 2 0.00037685 116.78 By matching By MS/MS 1 1 27038000 15526000 11512000 2914 2928 3301 7521;7522 7362 7362 6181 1 KGTTPPRSPEASPK KESPHFYRKGTTPPRS RSPEASPKHSHSPASS R K G P K H 1 1 0 0 0 0 1 1 0 0 0 2 0 0 4 2 2 0 0 0 0 0 14 2 1451.7732 Q9HDC5 Q9HDC5 458 471 JPH1 Junctophilin-1 yes yes 3 0.017979 56.347 By MS/MS By matching 1 1 4089300 2500600 1588800 2915 2882 3302 7523;7524 7363 7363 6071;6072 0 KGVLGKSPLSALAR QHQKALPKKGVLGKSP SPLSALARKKARLSLV K K G A R K 2 1 0 0 0 0 0 2 0 0 3 2 0 0 1 2 0 0 0 1 0 0 14 2 1395.8562 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 1284 1297 MYBBP1A Myb-binding protein 1A yes no 3 0.0034066 84.734 By MS/MS By MS/MS 1 1 13354000 7865800 5488600 2916 2741 3303 7525;7526 7364;7365;7366 7364 5688 3 KGVSASAVPFTPSSPLLSCSQEGSR PAGLYRIRKGVSASAV SCSQEGSRHTSKLSRH R K G S R H 2 1 0 0 1 1 1 2 0 0 2 1 0 1 3 7 1 0 0 2 0 0 25 1 2548.2592 J3QRU8;Q9Y2X7;J3QL89 J3QRU8 558 582 GIT1 ARF GTPase-activating protein GIT1 yes no 3 0.0076821 50.322 By MS/MS By matching 1 1 8710600 4512500 4198200 2917 1356 3304 7527;7528 7367 7367 2505;2506 1 KHDNETNLSTEK FTIVFTQKKHDNETNL ETNLSTEKVSKISLVD K K H E K V 0 0 2 1 0 0 2 0 1 0 1 2 0 0 0 1 2 0 0 0 0 0 12 1 1414.6688 A0A087WWA3;Q4R9M9;O60333 A0A087WWA3 229 240 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B yes no 2 0.0095769 68.676 By MS/MS By MS/MS 1 1 23924000 11538000 12386000 2918 86 3305 7529;7530 7368;7369;7370 7370 153;6852 3 KHSDPHLLER RSFADIGKKHSDPHLL SDPHLLERNGILASPQ K K H E R N 0 1 0 1 0 0 1 0 2 0 2 1 0 0 1 1 0 0 0 0 0 0 10 1 1230.6469 C9JRP1;Q9Y6M7 C9JRP1 240 249 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 yes no 3 0.012701 55.721 By matching By MS/MS 1 1 6728800 2682800 4046000 2919 690 3306 7531;7532 7371 7371 1274 1 KHSPSPPPPTPTESR ASANARKRKHSPSPPP PPTPTESRKKSGKKGQ R K H S R K 0 1 0 0 0 0 1 0 1 0 0 1 0 0 6 3 2 0 0 0 0 0 15 1 1613.8162 Q92922 Q92922 326 340 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2;3 4.9952E-21 154.31 By MS/MS By MS/MS 3 2 154950000 74118000 80830000 2920 2611 3307;3308 7533;7534;7535;7536;7537 7372;7373;7374;7375;7376;7377;7378 7378 5363;5364 7 KHSQTDLVSR KQPPPLMKKHSQTDLV SQTDLVSRLKTRKILG K K H S R L 0 1 0 1 0 1 0 0 1 0 1 1 0 0 0 2 1 0 0 1 0 0 10 1 1169.6153 E9PPM1;E9PN66;E9PNB3;E9PKN9;E9PS55;E9PMY0;E9PMW4;E9PQ46;E9PIN5;E9PIK4;U3KQ32;E9PKZ4;O14683 E9PPM1 12 21 TP53I11 Tumor protein p53-inducible protein 11 yes no 3 0.0010129 95.483 By MS/MS By MS/MS 1 1 38084000 15024000 23060000 2921 923 3309 7538;7539 7379;7380 7379 1722 2 KHSSDDYYYGDISSLESSQK TDTHKKKRKHSSDDYY SSLESSQKKKKKSSPQ R K H Q K K 0 0 0 3 0 1 1 1 1 1 1 2 0 0 0 6 0 0 3 0 0 0 20 1 2308.0132 Q9UGU5 Q9UGU5 77 96 HMGXB4 HMG domain-containing protein 4 yes yes 3 0.0081555 56.055 By MS/MS 1 13452000 13452000 0 2922 3002 3310 7540 7381 7381 8490 1 KICTLPSPPSPLASLAPVADSSTR SVHEKNGKKICTLPSP PVADSSTRVDSPSHGL K K I T R V 3 1 0 1 1 0 0 0 0 1 3 1 0 0 5 5 2 0 0 1 0 0 24 1 2464.2996 Q9UER7 Q9UER7 662 685 DAXX Death domain-associated protein 6 yes yes 3 0.011157 48.759 By MS/MS By MS/MS 1 1 15946000 9877400 6068300 2923 2997 3311 7541;7542 7382;7383 7382 6299;6300 2 KIDTHPSPSHSSTVK PEREQKRRKIDTHPSP PSHSSTVKVSIA____ R K I V K V 0 0 0 1 0 0 0 0 2 1 0 2 0 0 2 4 2 0 0 1 0 0 15 1 1619.8267 H7C477;H0Y7U4;A0A0C4DG98;Q8NI27;H0Y594 H7C477 147 161 THOC2 THO complex subunit 2 yes no 3;4 0.010964 60.196 By MS/MS By MS/MS 2 3 31072000 13287000 17785000 2924 311 3312 7543;7544;7545;7546;7547 7384;7385;7386 7384 544 3 KIIKQIISHSSK LENISSVKKIIKQIIS QIISHSSKVLHFPNPE K K I S K V 0 0 0 0 0 1 0 0 1 4 0 3 0 0 0 3 0 0 0 0 0 0 12 2 1380.8453 Q15042 Q15042 806 817 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 3 0.031835 40.857 By matching By MS/MS 1 1 56894000 25604000 31290000 2925 2122 3313 7548;7549 7387 7387 0 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK ETIGEILKKIIPTLEE CLNYQHYKGSDFDCEL K K I Y K G 2 0 1 1 1 3 4 1 1 2 6 2 0 0 4 3 3 0 2 1 0 0 37 1 4182.1195 P61978 P61978 103 139 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes yes 4 5.2295E-06 65.891 By matching By MS/MS 1 1 33345000 18315000 15030000 2926 1931 3314 7550;7551 7388 7388 3727;3728;7500;7501 1 KIPDPDSDDVSEVDAR TLPVEEKKKIPDPDSD DVSEVDARHIIENAKQ K K I A R H 1 1 0 5 0 0 1 0 0 1 0 1 0 0 2 2 0 0 0 2 0 0 16 1 1756.8115 Q9HBD4;A0A0A0MT49;P51532 Q9HBD4 689 704 SMARCA4 Transcription activator BRG1 yes no 2 0.0094208 73.498 By matching By MS/MS 1 1 15743000 3427200 12316000 2927 264 3315 7552;7553 7389 7389 461 1 KISLEDIQAFEK AYWRLLFKKISLEDIQ EDIQAFEKTYKGSEEE K K I E K T 1 0 0 1 0 1 2 0 0 2 1 2 0 1 0 1 0 0 0 0 0 0 12 1 1419.7609 Q8WXX5 Q8WXX5 107 118 DNAJC9 DnaJ homolog subfamily C member 9 yes yes 2 6.8781E-19 165.16 By MS/MS By MS/MS 1 1 36948000 22062000 14886000 2928 2572 3316 7554;7555 7390;7391 7390 5270 2 KISQRVIHLFDEK TAFSNVGRKISQRVIH VIHLFDEKGNDLGNMH R K I E K G 0 1 0 1 0 1 1 0 1 2 1 2 0 1 0 1 0 0 0 1 0 0 13 2 1611.9097 Q9H2K0 Q9H2K0 81 93 MTIF3 Translation initiation factor IF-3, mitochondrial yes yes 2 0.00088646 101.38 By MS/MS By matching 1 1 16534000 11669000 4864900 2929 2820 3317 7556;7557 7392 7392 167 1 KISVVSATK SLPKSFKRKISVVSAT ISVVSATKGVPAGNSD R K I T K G 1 0 0 0 0 0 0 0 0 1 0 2 0 0 0 2 1 0 0 2 0 0 9 1 931.57023 S4R3H4;E7EQT4;Q9UKV3;G3V3T3 S4R3H4 765 773 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0036216 110.15 By MS/MS 1 201130000 201130000 0 2930 810 3318 7558 7393 7393 1452 1 KISVVSTK SLPKSFKRKISVVSTK KISVVSTKGVPAGNSD R K I T K G 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 2 1 0 0 2 0 0 8 1 860.53312 G3V3B0 G3V3B0 65 72 ACIN1 yes yes 2 0.022033 75.566 By MS/MS By MS/MS 1 1 74356000 41942000 32414000 2931 1073 3319 7559;7560 7394;7395 7394 2034 2 KITIADCGQLE SRNGKTSKKITIADCG IADCGQLE________ K K I L E - 1 0 0 1 1 1 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1246.6227 P62937 P62937 155 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 4.0952E-07 159.79 By MS/MS By MS/MS 1 1 34859000 22600000 12259000 2932 1950 3320 7561;7562 7396;7397;7398 7398 3 KITSTAL LAQRRGIKKITSTAL_ KKITSTAL________ K K I A L - 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 7 1 732.43815 P51812 P51812 734 740 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 2 0.011846 115.49 By matching By MS/MS 1 1 13300000 6287500 7012200 2933 1879 3321 7563;7564 7399 7399 3641 1 KIVEPEVVGESDSEVEGDAWR EERLARHRKIVEPEVV EVEGDAWRMEREDSSE R K I W R M 1 1 0 2 0 0 5 2 0 1 0 1 0 0 1 2 0 1 0 4 0 0 21 1 2329.1074 P55081 P55081 106 126 MFAP1 Microfibrillar-associated protein 1 yes yes 2;3 0.00020785 118.05 By MS/MS By MS/MS 4 4 258580000 117000000 141570000 2934 1909 3322;3323 7565;7566;7567;7568;7569;7570;7571;7572 7400;7401;7402;7403;7404;7405;7406;7407 7403 3690;3691 8 KIYEDGDDDMKR EGLMNVLKKIYEDGDD DGDDDMKRTINKAWVE K K I K R T 0 1 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 1 0 0 0 12 2 1483.6613 Q9HB71 Q9HB71 197 208 CACYBP Calcyclin-binding protein yes yes 3 5.9139E-06 125.03 By MS/MS By MS/MS 1 1 10891000 4782500 6108700 2935 2865 3324 7573;7574 7408;7409 7408 8467 2 KKAEPSEVDMNSPK FPKAKQVKKKAEPSEV EVDMNSPKSKKAKKKE K K K P K S 1 0 1 1 0 0 2 0 0 0 0 3 1 0 2 2 0 0 0 1 0 0 14 2 1558.7661 Q9NR30 Q9NR30 60 73 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.018094 70.335 By MS/MS By MS/MS 2 2 21772000 11127000 10644000 2936 2905 3325;3326 7575;7576;7577;7578 7410;7411 7410 1149 6117 1 KKASLVALPEQTASEEETPPPLLTK PPRLTEDRKKASLVAL TPPPLLTKEASSPPPH R K K T K E 3 0 0 0 0 1 4 0 0 0 4 3 0 0 4 2 3 0 0 1 0 0 25 2 2676.4586 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 339 363 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.025289 61.522 By MS/MS 1 10708000 0 10708000 2937 810 3327 7579 7412 7412 1448;1449;7080;7081;7082 0 KKEEPSQNDISPK SPKSKKAKKKEEPSQN SQNDISPKTKSLRKKK K K K P K T 0 0 1 1 0 1 2 0 0 1 0 3 0 0 2 2 0 0 0 0 0 0 13 2 1498.7627 Q9NR30 Q9NR30 79 91 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.010074 74.726 By matching By MS/MS 1 1 124710000 76466000 48243000 2938 2905 3328 7580;7581 7413 7413 6118 1 KKEPAITSQNSPEAR TEKDLDEKKKEPAITS SQNSPEAREESTSSGN K K K A R E 2 1 1 0 0 1 2 0 0 1 0 2 0 0 2 2 1 0 0 0 0 0 15 2 1654.8638 P23193;E5RIS7 P23193 90 104 TCEA1 Transcription elongation factor A protein 1 yes no 2;3 0.0012336 100.69 By MS/MS By matching 2 2 88228000 41107000 47121000 2939 1752 3329 7582;7583;7584;7585 7414;7415 7415 3308 2 KKESDLPSAILQTSGVSEFTK KDKQHLKRKKESDLPS SGVSEFTKKRSKLVLP R K K T K K 1 0 0 1 0 1 2 1 0 1 2 3 0 1 1 4 2 0 0 1 0 0 21 2 2264.19 Q99459 Q99459 270 290 CDC5L Cell division cycle 5-like protein yes yes 3 0.0010115 80.236 By matching By MS/MS 1 1 13910000 6564600 7345600 2940 2721 3330 7586;7587 7416;7417 7416 5647 2 KKNDIYGED FDFEEMKRKKNDIYGE KNDIYGED________ R K K E D - 0 0 1 2 0 0 1 1 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1080.5088 P50395 P50395 437 445 GDI2 Rab GDP dissociation inhibitor beta yes yes 2 0.0097823 81.548 By MS/MS 1 2606600 0 2606600 2941 1866 3331 7588 7418 7418 8285 1 KKSNLELFK LKKGEKEKKKSNLELF KSNLELFKEELKQIQE K K K F K E 0 0 1 0 0 0 1 0 0 0 2 3 0 1 0 1 0 0 0 0 0 0 9 2 1105.6495 O15042;E7EW00;H0Y8D9;E7ET15 O15042 200 208 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 3 0.015537 77.674 By MS/MS By MS/MS 1 1 0 0 0 2942 1467 3332 7589;7590 7419;7420 7420 2735 2 KKSPNELVDDLFK QQIVGPPRKKSPNELV ELVDDLFKGAKEHGAV R K K F K G 0 0 1 2 0 0 1 0 0 0 2 3 0 1 1 1 0 0 0 1 0 0 13 2 1531.8246 Q9UNZ2;F2Z2K0 Q9UNZ2 112 124 NSFL1C NSFL1 cofactor p47 yes no 2;3 2.4358E-19 163.9 By MS/MS By MS/MS 2 2 63435000 31599000 31836000 2943 3063 3333 7591;7592;7593;7594 7421;7422;7423;7424;7425 7425 6464 5 KKTEFLDLDNSPLSPPSPR RTKDKEEKKKTEFLDL PLSPPSPRTKSRTHTR K K K P R T 0 1 1 2 0 0 1 0 0 0 3 2 0 1 4 3 1 0 0 0 0 0 19 2 2140.1164 Q8NCF5 Q8NCF5 188 206 NFATC2IP NFATC2-interacting protein yes yes 3 2.8182E-06 127.01 By MS/MS By MS/MS 1 1 23905000 13278000 10628000 2944 2502 3334 7595;7596 7426;7427 7426 5108 2 KLCQPQSTGSLLGDPAASSPPGER LLKRVLVRKLCQPQST ASSPPGERGRSASPPQ R K L E R G 2 1 0 1 1 2 1 3 0 0 3 1 0 0 4 4 1 0 0 0 0 0 24 1 2452.2016 U3KQ90;P55199 U3KQ90 158 181 ELL RNA polymerase II elongation factor ELL yes no 3 3.3803E-06 92.089 By MS/MS 1 11454000 0 11454000 2945 1911 3335 7597 7428 7428 3695 1 KLEDVKNSPTFK SVGSVITKKLEDVKNS VKNSPTFKSFEEKVEN K K L F K S 0 0 1 1 0 0 1 0 0 0 1 3 0 1 1 1 1 0 0 1 0 0 12 2 1404.7613 H0YC42;P55327 H0YC42 164 175 TPD52 Tumor protein D52 yes no 3 0.0027742 85.924 By MS/MS By MS/MS 1 1 21346000 13501000 7845200 2946 1167 3336 7598;7599 7429;7430 7429 7214 2 KLEKEEEEGISQESSEEEQ RKPRGRPKKLEKEEEE QESSEEEQ________ K K L E Q - 0 0 0 0 0 2 9 1 0 1 1 2 0 0 0 3 0 0 0 0 0 0 19 2 2235.9867 P17096 P17096 89 107 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2;3 1.5913E-09 140.33 By MS/MS By MS/MS 2 3 735710000 401420000 334290000 2947 1712 3337;3338 7600;7601;7602;7603;7604 7431;7432;7433;7434;7435;7436;7437;7438;7439 7432 3218;3219;3220 9 KLELDGEKETAPEEPGSPAK YKKEVERKKLELDGEK EEPGSPAKSAPASPVQ K K L A K S 2 0 0 1 0 0 5 2 0 0 2 3 0 0 3 1 1 0 0 0 0 0 20 2 2124.0586 P35612 P35612 576 595 ADD2 Beta-adducin yes yes 3 0.00064965 90.442 By MS/MS By MS/MS 1 1 50156000 28265000 21891000 2948 1800 3339 7605;7606 7440;7441 7440 3401 2 KLENSPLGEALR KTCQEKFKKLENSPLG SPLGEALRSGQARRSS K K L L R S 1 1 1 0 0 0 2 1 0 0 3 1 0 0 1 1 0 0 0 0 0 0 12 1 1325.7303 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40 D6RI08 50 61 OCIAD1 OCIA domain-containing protein 1 yes no 2 0.0021559 89.26 By MS/MS 1 17793000 17793000 0 2949 733 3340 7607 7442 7442 1332 1 KLGAGEGGEASVSPEK TPRSKKKKKLGAGEGG EASVSPEKTSTTSKGK K K L E K T 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 2 0 0 0 1 0 0 16 1 1514.7577 J3KQ96;E7ETY2;Q13428 J3KQ96 1328 1343 TCOF1 Treacle protein no no 2 0.022894 64.346 By MS/MS By matching 1 1 14815000 8955300 5859600 2950 822;2059 3341 7608;7609 7443 7443 1499;1500 1 KLGAGEGGEASVSPEKTSTTSK TPRSKKKKKLGAGEGG EKTSTTSKGKAKRDKA K K L S K G 2 0 0 0 0 0 3 4 0 0 1 3 0 0 1 4 3 0 0 1 0 0 22 2 2120.0597 J3KQ96;E7ETY2;Q13428 J3KQ96 1328 1349 TCOF1 Treacle protein no no 3 4.5469E-05 97.395 By MS/MS By MS/MS 1 1 287910000 122290000 165630000 2951 822;2059 3342 7610;7611 7444;7445 7444 1499;1500 2 KLGDVSPTQIDVSQFGSFK PALALDERKLGDVSPT VSQFGSFKEDTKMSIS R K L F K E 0 0 0 2 0 2 0 2 0 1 1 2 0 2 1 3 1 0 0 2 0 0 19 1 2052.0528 P46821 P46821 1496 1514 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 5.1291E-24 159.53 By MS/MS By MS/MS 2 2 47544000 22624000 24919000 2952 1840 3343 7612;7613;7614;7615 7446;7447;7448;7449;7450 7446 3499;7452 5 KLGDVSPTQIDVSQFGSFKEDTK PALALDERKLGDVSPT GSFKEDTKMSISEGTV R K L T K M 0 0 0 3 0 2 1 2 0 1 1 3 0 2 1 3 2 0 0 2 0 0 23 2 2525.2649 P46821 P46821 1496 1518 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.005282 65.189 By MS/MS By MS/MS 1 1 27552000 13494000 14058000 2953 1840 3344 7616;7617 7451;7452 7452 3499;7452 2 KLGQSESQGPPR AHKEAMSRKLGQSESQ SESQGPPRAFAKVNSI R K L P R A 0 1 0 0 0 2 1 2 0 0 1 1 0 0 2 2 0 0 0 0 0 0 12 1 1282.663 F5H169;F5H5V4;F5GX23;J3KN29;O00233 F5H169 72 83 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes no 2 0.019857 54.276 By MS/MS 1 4891200 4891200 0 2954 944 3345 7618 7453 7453 1772;1773 1 KLISSSQVDQETGFNR QVVRPKVRKLISSSQV DQETGFNRHEAKQRSV R K L N R H 0 1 1 1 0 2 1 1 0 1 1 1 0 1 0 3 1 0 0 1 0 0 16 1 1807.9064 O43164 O43164 320 335 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 2 0.0013164 93.115 By MS/MS By MS/MS 1 1 20604000 12885000 7718900 2955 1488 3346 7619;7620 7454;7455 7455 2781 2 KLLLDPSSPPTK SDQDREERKLLLDPSS DPSSPPTKALNGAEPN R K L T K A 0 0 0 1 0 0 0 0 0 0 3 2 0 0 3 2 1 0 0 0 0 0 12 1 1294.7497 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 20 31 LAMTOR1 Ragulator complex protein LAMTOR1 yes no 2 4.1474E-19 168 By MS/MS By MS/MS 1 1 15852000 8304600 7547200 2956 943 3347 7621;7622 7456;7457;7458 7458 1770 3 KLLPIVSIDIGPSPGNEVNFDSSGR VTKLWDFRKLLPIVSI VNFDSSGRVLAQASGN R K L G R V 0 1 2 2 0 0 1 3 0 3 2 1 0 1 3 4 0 0 0 2 0 0 25 1 2610.3653 H0Y811;Q8N0X2 H0Y811 175 199 SPAG16 Sperm-associated antigen 16 protein yes no 2 0.027177 48.547 By MS/MS 1 0 0 0 2957 1142 3348 7623 7459 7459 2168;2169;2170;2171 1 KLNSPEETAFQTPK SSYPVEPKKLNSPEET ETAFQTPKSSQMPRPS K K L P K S 1 0 1 0 0 1 2 0 0 0 1 2 0 1 2 1 2 0 0 0 0 0 14 1 1588.8097 Q9BTX1 Q9BTX1 403 416 NDC1 Nucleoporin NDC1 yes yes 2 4.8415E-16 148.33 By MS/MS By MS/MS 1 1 25909000 15391000 10517000 2958 2752 3349 7624;7625 7460;7461;7462 7461 5724 3 KLPPPPGSPLGHSPTASPPPTAR LHISPLAKKLPPPPGS ASPPPTARKMFPGLAA K K L A R K 2 1 0 0 0 0 0 2 1 0 2 1 0 0 9 3 2 0 0 0 0 0 23 1 2258.2172 B9EGQ5;M0QXA7;O95785 B9EGQ5 320 342 WIZ Protein Wiz yes no 3 7.3763E-05 90.017 By MS/MS By MS/MS 3 2 67696000 51046000 16650000 2959 612 3350;3351;3352 7626;7627;7628;7629;7630 7463;7464;7465;7466;7467 7465 1104;1105;1106;7006 5 KLPPPPPQAPPEEENESEPEEPSGVEGAAFQSR NAKAEKEKKLPPPPPQ EGAAFQSRLPHDRMTS K K L S R L 3 1 1 0 0 2 8 2 0 0 1 1 0 1 9 3 0 0 0 1 0 0 33 1 3525.6536 O60341 O60341 150 182 KDM1A Lysine-specific histone demethylase 1A yes yes 3 5.184E-05 65.899 By MS/MS By MS/MS 1 1 43835000 24656000 19179000 2960 1516 3353 7631;7632 7468;7469;7470;7471;7472 7472 2862 5 KLPSTTL ILAQRRVRKLPSTTL_ RKLPSTTL________ R K L T L - 0 0 0 0 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 0 0 0 7 1 758.4538 E9PGT3;Q15418 E9PGT3 718 724 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 yes no 2 0.032058 95.531 By matching By MS/MS 1 1 29740000 14661000 15079000 2961 875 3354 7633;7634 7473 7473 1 KLSEPSSLQYLPYR IRRQLLSKKLSEPSSL SLQYLPYRDYNYSLVM K K L Y R D 0 1 0 0 0 1 1 0 0 0 3 1 0 0 2 3 0 0 2 0 0 0 14 1 1679.8883 P04035 P04035 502 515 HMGCR 3-hydroxy-3-methylglutaryl-coenzyme A reductase yes yes 3 0.0004157 91.14 By MS/MS 1 3732700 3732700 0 2962 1633 3355 7635 7474;7475 7474 3083;3084 2 KLSFDFQ VKEFMTPRKLSFDFQ_ RKLSFDFQ________ R K L F Q - 0 0 0 1 0 1 0 0 0 0 1 1 0 2 0 1 0 0 0 0 0 0 7 1 883.44397 P23381 P23381 465 471 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 2 0.007679 98.04 By MS/MS 1 0 0 0 2963 1755 3356 7636 7476 7476 3310 1 KLSFFFDGTK EAMGLSGRKLSFFFDG SFFFDGTKLSGRELPA R K L T K L 0 0 0 1 0 0 0 1 0 0 1 2 0 3 0 1 1 0 0 0 0 0 10 1 1188.6179 Q8NCF5;H3BSZ7 Q8NCF5 388 397 NFATC2IP NFATC2-interacting protein yes no 2 0.022592 66.538 By MS/MS 1 1596600 1596600 0 2964 2502 3357 7637 7477 7477 5109 1 KLSGDQITLPTTVDYSSVPK ICRSGRGRKLSGDQIT VDYSSVPKQTDVEEWT R K L P K Q 0 0 0 2 0 1 0 1 0 1 2 2 0 0 2 3 3 0 1 2 0 0 20 1 2148.1314 E9PJ38;E9PND3;E9PN10;O00559 E9PJ38 34 53 EBAG9 Receptor-binding cancer antigen expressed on SiSo cells yes no 2;3 7.356E-16 144.95 By MS/MS By MS/MS 2 2 295440000 140130000 155320000 2965 886 3358 7638;7639;7640;7641 7478;7479;7480 7478 1646 2 KLSGDQPAAR KGWESRKRKLSGDQPA SGDQPAARTPRSKKKK R K L A R T 2 1 0 1 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 1 1041.5567 J3KQ96;E7ETY2;Q13428 J3KQ96 1310 1319 TCOF1 Treacle protein no no 2;3 0.0070306 82.069 By MS/MS By MS/MS 2 2 84404000 39054000 45350000 2966 822;2059 3359 7642;7643;7644;7645 7481;7482;7483 7483 1501 3 KLSLGQYDNDAGGQLPFSK QPLGGRLRKLSLGQYD GGQLPFSKCAWGKAGV R K L S K C 1 0 1 2 0 2 0 3 0 0 3 2 0 1 1 2 0 0 1 0 0 0 19 1 2037.0167 E9PCX8;Q68CZ2 E9PCX8 877 895 TNS3 Tensin-3 yes no 2 0.00063442 94.325 By MS/MS By matching 1 1 10519000 6079300 4439900 2967 851 3360 7646;7647 7484 7484 1581 1 KLSLPTDLKPDLDVK IEKAKMSRKLSLPTDL LKPDLDVKDNSFSRSR R K L V K D 0 0 0 3 0 0 0 0 0 0 4 3 0 0 2 1 1 0 0 1 0 0 15 2 1680.9662 H0Y332;Q5JRH0;Q5T5C0 H0Y332 83 97 STXBP5 Syntaxin-binding protein 5 yes no 3 0.0023518 86.748 By MS/MS By MS/MS 1 1 28802000 14270000 14531000 2968 1113 3361 7648;7649 7485;7486 7486 2102 2 KLSLQERPAGSYLEAQAGPYATGPASHISPR ARPSLSARKLSLQERP PASHISPRAWRRPTIE R K L P R A 5 2 0 0 0 2 2 3 1 1 3 1 0 0 4 4 1 0 2 0 0 0 31 2 3251.6687 J3KPJ3;Q8N5S9 J3KPJ3 99 129 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 yes no 4 0.014898 45.983 By MS/MS 1 7735800 7735800 0 2969 1326 3362 7650 7487 7487 2459 1 KLSPIIEDSR YSQTLSIKKLSPIIED SPIIEDSREATHSSGF K K L S R E 0 1 0 1 0 0 1 0 0 2 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1156.6452 O60566 O60566 668 677 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 2 0.023573 74.853 By matching By MS/MS 1 1 31028000 16268000 14760000 2970 1522 3363 7651;7652 7488 7488 2873 0 KLSRADLTEYLSTHYK EGPSENVRKLSRADLT EYLSTHYKAPRMVLAA R K L Y K A 1 1 0 1 0 0 1 0 1 0 3 2 0 0 0 2 2 0 2 0 0 0 16 2 1924.0054 P31930 P31930 210 225 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 2 0.023739 56.799 By MS/MS 1 0 0 0 2971 1785 3364 7653 7489 7489 3370;3371 1 KLSSSDAPAQDTGSSAAAVETDASR KVAGKVTRKLSSSDAP AVETDASRTGAQQKMR R K L S R T 6 1 0 3 0 1 1 1 0 0 1 1 0 0 1 6 2 0 0 1 0 0 25 1 2421.1256 Q7Z4S6;A0A1B0GV47;H0YIM6;H0YHT2 Q7Z4S6 851 875 KIF21A Kinesin-like protein KIF21A yes no 2;3 8.481E-40 166.68 By MS/MS By MS/MS 2 2 280510000 135750000 144760000 2972 2386 3365 7654;7655;7656;7657 7490;7491;7492;7493;7494 7491 4847;4848;4849 5 KLSSSSEPYEEDEFNDDQSIKK AGGGPRKRKLSSSSEP NDDQSIKKTRLDHCAW R K L K K T 0 0 1 3 0 1 4 0 0 1 1 3 0 1 1 5 0 0 1 0 0 0 22 2 2574.1609 D6RAY8;Q9H4L7 D6RAY8 209 230 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 1.6133E-11 135.49 By MS/MS By MS/MS 2 2 119280000 55841000 63443000 2973 747 3366 7658;7659;7660;7661 7495;7496;7497;7498;7499 7499 1354;1355 5 KLSSWDQAETPGHTPSLR QTPGATPKKLSSWDQA PGHTPSLRWDETPGRA K K L L R W 1 1 0 1 0 1 1 1 1 0 2 1 0 0 2 3 2 1 0 0 0 0 18 1 2008.9967 O75533 O75533 214 231 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.0086193 68.676 By MS/MS By MS/MS 2 2 85974000 42739000 43235000 2974 1549 3367;3368 7662;7663;7664;7665 7500;7501;7502 7500 2927;7340;7341 3 KLSVPTSDEEDEVPAPK KELMERLKKLSVPTSD EDEVPAPKPRGGKKTK K K L P K P 1 0 0 2 0 0 3 0 0 0 1 2 0 0 3 2 1 0 0 2 0 0 17 1 1839.9102 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 104 120 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 0.00020747 106.39 By MS/MS By MS/MS 3 3 146650000 65931000 80715000 2975 2232 3369;3370 7666;7667;7668;7669;7670;7671 7503;7504;7505;7506;7507;7508;7509;7510 7505 4466;4467;7639 8 KLSVPTSDEEDEVPAPKPR KELMERLKKLSVPTSD EVPAPKPRGGKKTKGG K K L P R G 1 1 0 2 0 0 3 0 0 0 1 2 0 0 4 2 1 0 0 2 0 0 19 2 2093.0641 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 104 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 5.0171E-16 147.03 By MS/MS By MS/MS 3 3 210830000 102510000 108320000 2976 2232 3371;3372;3373 7672;7673;7674;7675;7676;7677 7511;7512;7513;7514;7515 7513 4466;4467;7639 5 KLTQASESQTRTPK ACQKPRKKKLTQASES ESQTRTPKPRRSLALN K K L P K P 1 1 0 0 0 2 1 0 0 0 1 2 0 0 1 2 3 0 0 0 0 0 14 2 1573.8424 C9JSJ3 C9JSJ3 180 193 BHMG1 Basic helix-loop-helix and HMG box domain-containing protein 1 yes yes 3 0.011554 54.768 By matching By MS/MS 1 1 13891000 7387300 6504100 2977 692 3374 7678;7679 7516 7516 1278;7038 1 KLTSDEEGEPSGK AQRLLKAKKLTSDEEG EEGEPSGKRKAEDDDK K K L G K R 0 0 0 1 0 0 3 2 0 0 1 2 0 0 1 2 1 0 0 0 0 0 13 1 1375.6467 Q8WVC0 Q8WVC0 627 639 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 0.00059723 115.26 By MS/MS By MS/MS 1 1 19869000 10787000 9082200 2978 2559 3375 7680;7681 7517;7518 7518 5228 2 KLTSTSAITR RKVKKTRRKLTSTSAI TSTSAITRQPNIKQKF R K L T R Q 1 1 0 0 0 0 0 0 0 1 1 1 0 0 0 2 3 0 0 0 0 0 10 1 1076.619 Q6VY07;H0YE62;H0YF56 Q6VY07 317 326 PACS1 Phosphofurin acidic cluster sorting protein 1 yes no 2 0.011988 75.739 By MS/MS By matching 1 1 9366000 6527400 2838500 2979 2342 3376 7682;7683 7519 7519 4735 1 KLWVTPSSENPNGATSSVSQGK GSLLPLKRKLWVTPSS TSSVSQGKPSLRRIKG R K L G K P 1 0 2 0 0 1 1 2 0 0 1 2 0 0 2 5 2 1 0 2 0 0 22 1 2273.1288 H0YLT6 H0YLT6 56 77 TJP1 yes yes 2 0.025169 54.951 By MS/MS 1 0 0 0 2980 1213 3377 7684 7520 7520 2255;2256;2257;2258 1 KMGAPESGLAEYLFDKHTLGDSDNES GDHVTNLRKMGAPESG LGDSDNES________ R K M E S - 2 0 1 3 0 0 3 3 1 0 3 2 1 1 1 3 1 0 1 0 0 0 26 2 2810.2705 G3V1D1;G3V192;P02794 G3V1D1 88 113 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes no 3;4 0.0015227 69.525 By MS/MS By MS/MS 3 3 152310000 76554000 75757000 2981 1060 3378;3379 7685;7686;7687;7688;7689;7690 7521;7522;7523;7524 7521 380 2005;2006 4 KMICCFSQENPER EDMYGTMKKMICCFSQ FSQENPERRPSRIPST K K M E R R 0 1 1 0 2 1 2 0 0 1 0 1 1 1 1 1 0 0 0 0 0 0 13 1 1697.7324 Q9UBY5 Q9UBY5 306 318 LPAR3 Lysophosphatidic acid receptor 3 yes yes 2 0.017477 64.374 By MS/MS 1 0 0 0 2982 2995 3380 7691 7525 7525 6297 1 KMLGEDSDEEEEMDTSER QQQILLEKKMLGEDSD EEMDTSERKINAGSQD K K M E R K 0 1 0 3 0 0 6 1 0 0 1 1 2 0 0 2 1 0 0 0 0 0 18 1 2128.8413 A0A087WWF4;A0A087X0M4;Q9BWU0;H7C256 A0A087WWF4 76 93 SLC4A1AP Kanadaptin yes no 3 0.00080221 79.935 By MS/MS By MS/MS 1 1 5298300 5298300 0 2983 88 3381;3382 7692;7693 7526;7527 7526 32 157 2 KMMDEINYAK VEKQNLERKMMDEINY MDEINYAKEEACRLRE R K M A K E 1 0 1 1 0 0 1 0 0 1 0 2 2 0 0 0 0 0 1 0 0 0 10 1 1241.5784 H0Y860;Q9P246;H7C5A5 H0Y860 289 298 STIM2 Stromal interaction molecule 2 yes no 3 0.018809 43.308 By MS/MS 1 21907000 21907000 0 2984 1144 3383 7694 7528 7528 415 1 KMPLDLSPLATPIIR KASEDDIKKMPLDLSP PLATPIIRSKIEEPSV K K M I R S 1 1 0 1 0 0 0 0 0 2 3 1 1 0 3 1 1 0 0 0 0 0 15 1 1663.9695 E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336;C9JCI8 E9PEK8 106 120 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes no 2 0.00068268 105.77 By MS/MS By MS/MS 1 1 23442000 11890000 11553000 2985 607 3384 7695;7696 7529;7530 7530 239 1095 2 KMSFDIIDK KNLRLPRRKMSFDIID MSFDIIDKSDVFSRFG R K M D K S 0 0 0 2 0 0 0 0 0 2 0 2 1 1 0 1 0 0 0 0 0 0 9 1 1095.5634 M0R3F6;M0R2Z9;Q8IX01 M0R3F6 313 321 SUGP2 SURP and G-patch domain-containing protein 2 yes no 2 0.0052558 137.95 By MS/MS By MS/MS 2 2 12409000 7416800 4992200 2986 1424 3385;3386 7697;7698;7699;7700 7531;7532;7533;7534 7533 499 2617 4 KMSPQNIGAAR MVHPILHRKMSPQNIG PQNIGAARPIKRSLED R K M A R P 2 1 1 0 0 1 0 1 0 1 0 1 1 0 1 1 0 0 0 0 0 0 11 1 1171.6132 Q14865 Q14865 1000 1010 ARID5B AT-rich interactive domain-containing protein 5B yes yes 2 0.026777 75.819 By MS/MS 1 233440000 0 233440000 2987 2109 3387 7701 7535 7535 4173 1 KNAIASDSEADSDTEVPK DEVLRMKRKNAIASDS DSDTEVPKDNSGTMDL R K N P K D 3 0 1 3 0 0 2 0 0 1 0 2 0 0 1 3 1 0 0 1 0 0 18 1 1875.8698 Q8WVC0 Q8WVC0 289 306 LEO1 RNA polymerase-associated protein LEO1 yes yes 2;3 0.00022717 95.988 By MS/MS By matching 2 2 101550000 41444000 60103000 2988 2559 3388 7702;7703;7704;7705 7536;7537 7536 5229;5230;7748 2 KNASSVSQDSWEQNYSPGEGFQSAK SSLPRQSRKNASSVSQ GEGFQSAKENPRYSSY R K N A K E 2 0 2 1 0 3 2 2 0 0 0 2 0 1 1 6 0 1 1 1 0 0 25 1 2730.2158 Q5VWV2;Q8TEW0 Q5VWV2 1170 1194 PARD3 Partitioning defective 3 homolog yes no 3 0.0012509 63.559 By MS/MS 1 5460700 5460700 0 2989 2278 3389 7706 7538 7538 8372 1 KNEVYETFSYPESYSPTLPVSR KLKLQKMKKNEVYETF SPTLPVSRRENNSPSN K K N S R R 0 1 1 0 0 0 3 0 0 0 1 1 0 1 3 4 2 0 3 2 0 0 22 1 2592.2384 Q5H966;Q9UN30 Q5H966 97 118 SCML1 Sex comb on midleg-like protein 1 yes no 3 0.00036008 76.614 By MS/MS By MS/MS 1 1 14470000 6213700 8256400 2990 2214 3390 7707;7708 7539;7540 7539 4427;4428;8364 2 KNGSTAVAESVASPQK EKPATGERKNGSTAVA ESVASPQKTMSVLSCI R K N Q K T 3 0 1 0 0 1 1 1 0 0 0 2 0 0 1 3 1 0 0 2 0 0 16 1 1572.8107 Q12888;A6NNK5;C9JXV0 Q12888 1016 1031 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.024723 59.728 By MS/MS 1 0 0 0 2991 2031 3391 7709 7541 7541 101 3954 1 KNINLQPMWQLLPVEQDTSNVTEMKVSEK YSNKDIKKKNINLQPM TEMKVSEKSHNTFKAT K K N E K S 0 0 3 1 0 3 3 0 0 1 3 3 2 0 2 2 2 1 0 3 0 0 29 2 3398.7214 A4UGR9 A4UGR9 2027 2055 XIRP2 Xin actin-binding repeat-containing protein 2 yes yes 4 0.018303 40.104 By matching By MS/MS 1 1 25180000 11427000 13754000 2992 462 3392 7710;7711 7542 7542 179 1 KNQKPSQVNGAPGSPTEPAGQK AKSPKLQKKNQKPSQV PTEPAGQKQHQKALPK K K N Q K Q 2 0 2 0 0 3 1 3 0 0 0 3 0 0 4 2 1 0 0 1 0 0 22 2 2219.1295 Q9BQG0;I3L1L3 Q9BQG0 1254 1275 MYBBP1A Myb-binding protein 1A yes no 3 3.7502E-05 101.08 By MS/MS By MS/MS 3 2 66301000 27418000 38883000 2993 2741 3393 7712;7713;7714;7715;7716 7543;7544;7545;7546 7545 129 5689 4 KNSAPQLPLLQSSGPFVEGSIVR SSEVPSKRKNSAPQLP FVEGSIVRISMENFLT R K N V R I 1 1 1 0 0 2 1 2 0 1 3 1 0 1 3 4 0 0 0 2 0 0 23 1 2423.3173 Q8IY18 Q8IY18 33 55 SMC5 Structural maintenance of chromosomes protein 5 yes yes 3 0.0066346 68.834 By MS/MS 1 9017500 9017500 0 2994 2437 3394 7717 7547 7547 4982 0 KNSLRVEGDNIYVR HLQLIEGKKNSLRVEG EGDNIYVRHSNLMLEE K K N V R H 0 2 2 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 1 2 0 0 14 2 1661.8849 O43491;H0Y5B0 O43491 612 625 EPB41L2 Band 4.1-like protein 2 yes no 3 0.006137 69.314 By MS/MS By MS/MS 1 1 96529000 51517000 45013000 2995 1502 3395 7718;7719 7548;7549 7548 2809;8200 2 KNSSQDDLFPTSDTPR AATGTTSKKNSSQDDL FPTSDTPRAKVLKIEE K K N P R A 0 1 1 3 0 1 0 0 0 0 1 1 0 1 2 3 2 0 0 0 0 0 16 1 1806.8384 Q9H6T3 Q9H6T3 478 493 RPAP3 RNA polymerase II-associated protein 3 yes yes 3 0.031495 40.477 By MS/MS 1 0 0 0 2996 2844 3396 7720 7550 7550 1 KNSTDLDSAPEDPTSPK LGSYRKKRKNSTDLDS PEDPTSPKRKMRRRSS R K N P K R 1 0 1 3 0 0 1 0 0 0 1 2 0 0 3 3 2 0 0 0 0 0 17 1 1800.8378 A0A0A0MQR4;I3L2J0;Q96RK0;I3L373;I3L135;I3L1Q4 A0A0A0MQR4 1393 1409 CIC Protein capicua homolog yes no 2 0.00087128 110.33 By MS/MS By MS/MS 1 1 14196000 8484600 5711500 2997 186 3397 7721;7722 7551;7552 7552 329;330 2 KNSTGSGHSAQELPTIR KEEAKRKRKNSTGSGH AQELPTIRTPADIYRA R K N I R T 1 1 1 0 0 1 1 2 1 1 1 1 0 0 1 3 2 0 0 0 0 0 17 1 1781.902 I3L280;O94763 I3L280 117 133 URI1 Unconventional prefoldin RPB5 interactor 1 yes no 3 0.027035 46.953 By MS/MS By matching 1 1 21057000 11551000 9505800 2998 1309 3398 7723;7724 7553 7553 2433 1 KNTFTAWSDEESDYEIDDR EMEQMDGRKNTFTAWS SDYEIDDRDVNKILIV R K N D R D 1 1 1 4 0 0 3 0 0 1 0 1 0 1 0 2 2 1 1 0 0 0 19 1 2319.9768 Q6PKG0;A0A0B4J210;E5RH50 Q6PKG0 620 638 LARP1 La-related protein 1 yes no 2;3 0.0035114 75.589 By MS/MS By MS/MS 1 2 7179100 0 7179100 2999 2330 3399;3400 7725;7726;7727 7554;7555;7556 7554 4698;4699 2 KNTHENIQLSQSKK PVKKTQRRKNTHENIQ IQLSQSKKFDEGENSL R K N K K F 0 0 2 0 0 2 1 0 1 1 1 3 0 0 0 2 1 0 0 0 0 0 14 2 1653.8798 Q6ZWT7 Q6ZWT7 472 485 MBOAT2 Lysophospholipid acyltransferase 2 yes yes 2 0.027294 57.532 By MS/MS 1 0 0 0 3000 2356 3401 7728 7557 7557 4776 1 KPAFNLSAFGTLSPSLGNSSILK QHTATSSKKPAFNLSA LGNSSILKTSQLGDSP K K P L K T 2 0 2 0 0 0 0 2 0 1 4 2 0 2 2 5 1 0 0 0 0 0 23 1 2348.274 P49790 P49790 228 250 NUP153 Nuclear pore complex protein Nup153 yes yes 3 0.0015363 64.583 By MS/MS 1 6652500 0 6652500 3001 1859 3402 7729 7558 7558 3591 1 KPALPVSPAAR QDLSGDFKKPALPVSP LPVSPAARSKAPASSS K K P A R S 3 1 0 0 0 0 0 0 0 0 1 1 0 0 3 1 0 0 0 1 0 0 11 1 1105.6608 A0A087WWF4;A0A087X0M4;Q9BWU0 A0A087WWF4 22 32 SLC4A1AP Kanadaptin yes no 2;3 0.016682 70.438 By MS/MS 2 21515000 0 21515000 3002 88 3403 7730;7731 7559;7560 7560 158 2 KPATPAEDDEDDDIDLFGSDNEEEDK RQVEPPAKKPATPAED SDNEEEDKEAAQLREE K K P D K E 2 0 1 8 0 0 5 1 0 1 1 2 0 1 2 1 1 0 0 0 0 0 26 1 2908.1894 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;H0YE72 E9PL71 120 145 EEF1D Elongation factor 1-delta yes no 3 1.139E-29 156.02 By MS/MS By MS/MS 1 1 283710000 144310000 139390000 3003 172 3404 7732;7733 7561;7562 7562 280 2 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR RQVEPPAKKPATPAED DKEAAQLREERLRQYA K K P L R E 4 1 1 8 0 1 6 1 0 1 2 2 0 1 2 1 1 0 0 0 0 0 32 2 3576.55 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;H0YE72 E9PL71 120 151 EEF1D Elongation factor 1-delta yes no 3;4;5 4.6064E-87 193.98 By MS/MS By MS/MS 8 9 8090200000 3794600000 4295600000 3004 172 3405 7734;7735;7736;7737;7738;7739;7740;7741;7742;7743;7744;7745;7746;7747;7748;7749;7750 7563;7564;7565;7566;7567;7568;7569;7570;7571;7572;7573;7574;7575;7576;7577;7578;7579;7580;7581 7576 280 19 KPEAESMK K P M K 1 0 0 0 0 0 2 0 0 0 0 2 1 0 1 1 0 0 0 0 0 0 8 1 918.44807 REV__O00570 yes yes 2 0.0075687 76.847 By MS/MS 1 26363000 0 26363000 + 3005 3197 3406 7751 7582 7582 1261 1 KPEDVLDDDDAGSAPLK IFIYEKRRKPEDVLDD DAGSAPLKSSGQHQND R K P L K S 2 0 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 17 1 1783.8476 A0A087WUV8;P35613 A0A087WUV8 154 170 BSG Basigin yes no 2;3 1.149E-42 179.84 By MS/MS By MS/MS 2 2 85641000 40646000 44995000 3006 63 3407 7752;7753;7754;7755 7583;7584;7585;7586 7585 113 4 KPEDWDEEMDGEWEPPVIQNPEYK HIPDPDAKKPEDWDEE VIQNPEYKGEWKPRQI K K P Y K G 0 0 1 3 0 1 6 1 0 1 0 2 1 0 4 0 0 2 1 1 0 0 24 1 2959.2858 K7EJB9;P27797;K7EL50 K7EJB9 181 204 CALR Calreticulin yes no 3 1.0308E-05 84.156 By MS/MS By MS/MS 1 1 31874000 17620000 14254000 3007 1369 3408 7756;7757 7587;7588;7589 7588 477 3 KPEECSCSKQSYYNK VRGHLKRRKPEECSCS SKQSYYNKEKGVKKQE R K P N K E 0 0 1 0 2 1 2 0 0 0 0 3 0 0 1 3 0 0 2 0 0 0 15 2 1906.8189 H0YDR1;A0A087WWR8;Q8IWU6 H0YDR1 12 26 SULF1 Extracellular sulfatase Sulf-1 yes no 2 0.016896 60.918 By MS/MS 1 0 0 0 3008 97 3409 7758 7590 7590 176;177;7985;7986 1 KPEEESPR SHLVRKKRKPEEESPR KPEEESPRKDDAKKAK R K P P R K 0 1 0 0 0 0 3 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 8 1 970.47197 P49321;H0YF33;Q5T624 P49321 721 728 NASP Nuclear autoantigenic sperm protein yes no 2 0.022244 78.098 By MS/MS By MS/MS 1 2 13059000 7074400 5984500 3009 1851 3410 7759;7760;7761 7591;7592 7591 3560 0 KPENEVAQNGGAETSHTEPVSPIPK PDWKGIPKKPENEVAQ EPVSPIPKPLPVPVPP K K P P K P 2 0 2 0 0 1 4 2 1 1 0 2 0 0 4 2 2 0 0 2 0 0 25 1 2615.2827 O95104 O95104 636 660 SCAF4 Splicing factor, arginine/serine-rich 15 yes yes 3 0.0080931 47.288 By MS/MS By matching 2 1 45767000 34739000 11027000 3010 1580 3411;3412 7762;7763;7764 7593;7594 7594 2990;7353 2 KPESPYGNLCDAPDSPRPVK NVRKPTPRKPESPYGN PDSPRPVKASREDSGL R K P V K A 1 1 1 2 1 0 1 1 0 0 1 2 0 0 5 2 0 0 1 1 0 0 20 2 2226.0739 Q9UKA4 Q9UKA4 419 438 AKAP11 A-kinase anchor protein 11 yes yes 3 0.00025506 93.115 By MS/MS 2 21526000 21526000 0 3011 3021 3413;3414 7765;7766 7595;7596 7596 6364;6365 2 KPFKLSGLSFK KKKKFSFKKPFKLSGL KLSGLSFKRNRKEGGG K K P F K R 0 0 0 0 0 0 0 1 0 0 2 3 0 2 1 2 0 0 0 0 0 0 11 2 1250.7387 P49006 P49006 96 106 MARCKSL1 MARCKS-related protein yes yes 2 0.00027191 123.68 By matching By MS/MS 2 2 104870000 54317000 50555000 3012 1849 3415;3416 7767;7768;7769;7770 7597;7598 7598 3556;3557 2 KPGPPLSPEIR PPVSPELRKPGPPLSP PPLSPEIRSPAGSPEL R K P I R S 0 1 0 0 0 0 1 1 0 1 1 1 0 0 4 1 0 0 0 0 0 0 11 1 1189.6819 Q96JM3 Q96JM3 421 431 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 0.0037185 76.358 By MS/MS By MS/MS 2 3 26941000 13037000 13903000 3013 2674 3417 7771;7772;7773;7774;7775 7599;7600;7601;7602;7603 7599 5510 5 KPGPPLSPEIRSPAGSPELR PPVSPELRKPGPPLSP PAGSPELRKPSGSPDL R K P L R K 1 2 0 0 0 0 2 2 0 1 2 1 0 0 6 3 0 0 0 0 0 0 20 2 2084.1378 Q96JM3 Q96JM3 421 440 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.019586 53.209 By matching By MS/MS 1 1 287070000 148700000 138380000 3014 2674 3418 7776;7777 7604 7604 5510;5511;5512 1 KPGPSGPSESPK KPVFPETRKPGPSGPS SGPSESPKAASDIWKP R K P P K A 0 0 0 0 0 0 1 2 0 0 0 2 0 0 4 3 0 0 0 0 0 0 12 1 1166.5932 Q96JM3 Q96JM3 498 509 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0017973 92.269 By matching By MS/MS 1 2 35474000 10786000 24688000 3015 2674 3419 7778;7779;7780 7605;7606 7605 5513 2 KPIDSLRDSR ERRSRSPRKPIDSLRD IDSLRDSRSLSYSPVE R K P S R S 0 2 0 2 0 0 0 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 10 2 1185.6466 Q9UQ35;I3L4U6 Q9UQ35 2680 2689 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.031458 69.216 By matching By MS/MS 1 1 31984000 16468000 15516000 3016 3074 3420 7781;7782 7607 7607 1 KPIETGSPK EKEKKEEKKPIETGSP PIETGSPKTKECSVEK K K P P K T 0 0 0 0 0 0 1 1 0 1 0 2 0 0 2 1 1 0 0 0 0 0 9 1 955.53385 Q5T757;Q05519 Q5T757 383 391 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.021792 98.182 By MS/MS 1 72679000 72679000 0 3017 2003 3421 7783 7608 7608 1 KPLPDHVSIVEPKDEILPTTPISEQK PTGKIGPKKPLPDHVS TTPISEQKGGKPEPPA K K P Q K G 0 0 0 2 0 1 3 0 1 3 2 3 0 0 5 2 2 0 0 2 0 0 26 2 2909.575 E9PL09;P23396;H0YEU2;E9PSF4;E9PPU1 E9PL09 190 215 RPS3 40S ribosomal protein S3 yes no 4 0.0079064 56.131 By MS/MS By MS/MS 1 2 25057000 10780000 14277000 3018 899 3422 7784;7785;7786 7609;7610;7611 7610 7119;7120 1 KPLPTAAAQCSFEDPDSAVDDR SSQEESQRKPLPTAAA PDSAVDDRDSDYRSET R K P D R D 4 1 0 4 1 1 1 0 0 0 1 1 0 1 3 2 1 0 0 1 0 0 22 1 2389.0856 A0A0U1RRL2;A0A1B0GUS7;O14795 A0A0U1RRL2 166 187 UNC13B Protein unc-13 homolog B yes no 3 0.004935 57.142 By MS/MS 1 10524000 0 10524000 3019 396 3423 7787 7612 7612 726 1 KPLSLAGDEETECQSSPK ALQLRPTRKPLSLAGD TECQSSPKHSSRERRR R K P P K H 1 0 0 1 1 1 3 1 0 0 2 2 0 0 2 3 1 0 0 0 0 0 18 1 1974.9204 F5H1K3;Q86TN4 F5H1K3 83 100 TRPT1 tRNA 2-phosphotransferase 1 yes no 2;3 0.00029657 92.096 By MS/MS By MS/MS 2 2 26286000 12665000 13621000 3020 961 3424 7788;7789;7790;7791 7613;7614;7615 7615 1809;1810 3 KPLVIIAEDVDGEALSTLVLNR LEIANAHRKPLVIIAE LSTLVLNRLKVGLQVV R K P N R L 2 1 1 2 0 0 2 1 0 2 4 1 0 0 1 1 1 0 0 3 0 0 22 1 2364.3264 P10809 P10809 269 290 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 0.00025889 58.516 By MS/MS By matching 1 1 8928900 5629500 3299400 3021 1677 3425 7792;7793 7616 7616 1 KPPAPPSPVQSQSPSTNWSPAVPVK GSPEPAAKKPPAPPSP WSPAVPVKKAKSPTPS K K P V K K 2 0 1 0 0 2 0 0 0 0 0 2 0 0 8 5 1 1 0 3 0 0 25 1 2582.3493 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 772 796 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 5.3246E-07 101.39 By MS/MS By MS/MS 3 3 305970000 159250000 146720000 3022 511 3426;3427;3428 7794;7795;7796;7797;7798;7799 7617;7618;7619;7620;7621;7622;7623;7624;7625;7626;7627;7628;7629 7628 943;944;945;946;947;6974 13 KPPAPPSPVQSQSPSTNWSPAVPVKK GSPEPAAKKPPAPPSP SPAVPVKKAKSPTPSP K K P K K A 2 0 1 0 0 2 0 0 0 0 0 3 0 0 8 5 1 1 0 3 0 0 26 2 2710.4442 A9Z1X7;Q8IYB3 A9Z1X7 772 797 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3;4 6.3303E-07 102.45 By MS/MS By MS/MS 4 4 237700000 115990000 121710000 3023 511 3429;3430 7800;7801;7802;7803;7804;7805;7806;7807 7630;7631;7632;7633;7634;7635;7636;7637;7638;7639;7640;7641 7636 943;944;945;946;947;6974 12 KPQRDSQAQK KAHSKDKKKPQRDSQA QRDSQAQKSPVKSKST K K P Q K S 1 1 0 1 0 3 0 0 0 0 0 2 0 0 1 1 0 0 0 0 0 0 10 2 1184.6262 D6RAC8;Q9NQ76 D6RAC8 172 181 MEPE Matrix extracellular phosphoglycoprotein yes no 2 0.014737 79.07 By matching By MS/MS 1 1 19565000 11227000 8338300 3024 740 3431 7808;7809 7642 7642 1339 1 KPSGSPDLWK PAGSPELRKPSGSPDL SGSPDLWKLSPDQRKT R K P W K L 0 0 0 1 0 0 0 1 0 0 1 2 0 0 2 2 0 1 0 0 0 0 10 1 1113.5819 Q96JM3 Q96JM3 441 450 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0033727 103.14 By MS/MS By MS/MS 1 1 29258000 13000000 16258000 3025 2674 3432 7810;7811 7643;7644 7643 5514;5515 2 KPSGSPDLWKLSPDQR PAGSPELRKPSGSPDL WKLSPDQRKTSPASLD R K P Q R K 0 1 0 2 0 1 0 1 0 0 2 2 0 0 3 3 0 1 0 0 0 0 16 2 1809.9373 Q96JM3 Q96JM3 441 456 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.00064291 93.181 By MS/MS By MS/MS 2 2 103400000 53389000 50010000 3026 2674 3433;3434 7812;7813;7814;7815 7645;7646;7647 7646 5514;5515;5516 3 KPSKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLK ATVPQSEKKPSKYPLC LPEPPVLKVLSSLKPA K K P L K V 3 0 0 1 1 0 1 1 0 0 3 3 0 0 13 4 2 0 1 2 0 0 35 2 3588.8902 Q9BTC0 Q9BTC0 1240 1274 DIDO1 Death-inducer obliterator 1 yes yes 4 0.0037301 50.071 By MS/MS 1 13691000 0 13691000 3027 2747 3435 7816 7648 7648 5706;7824;7825 1 KPSLLYEGFESPTMASVPALQLTPANPPPPEVSNPK AAPGKRIRKPSLLYEG PPEVSNPKKPGRVTNQ R K P P K K 3 0 2 0 0 1 3 1 0 0 4 2 1 1 9 4 2 0 1 2 0 0 36 1 3802.9492 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2;E9PKQ9;H0Y799;A0A140T9X8 H0Y6K2 41 76 BRD2 Bromodomain-containing protein 2 yes no 3;4 0.00025728 57.832 By MS/MS By MS/MS 1 2 57829000 23257000 34571000 3028 353 3436 7817;7818;7819 7649;7650 7650 139 628;629;6932 2 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK REVTPYIKKPSLVSDL SEDSGSPKHQNSTKDR K K P P K H 2 0 0 2 0 1 2 3 0 0 2 2 0 1 5 8 0 1 0 1 0 0 30 1 3043.4411 Q13425;H7BY41;H0YCS0 Q13425 206 235 SNTB2 Beta-2-syntrophin yes no 3 1.0925E-19 140.04 By MS/MS By MS/MS 2 3 95342000 32017000 63324000 3029 2058 3437;3438 7820;7821;7822;7823;7824 7651;7652;7653;7654;7655;7656 7652 4052;4053;4054 6 KPSPAQAAETPALELPLPSVPAPAPL KLEQLDHRKPSPAQAA SVPAPAPL________ R K P P L - 6 0 0 0 0 1 2 0 0 0 4 1 0 0 8 2 1 0 0 1 0 0 26 1 2561.4105 A0A0X1KG71;Q8WX92 A0A0X1KG71 603 628 NELFB Negative elongation factor B yes no 2;3 1.3208E-06 95.751 By MS/MS By MS/MS 2 2 145340000 91384000 53954000 3030 402 3439 7825;7826;7827;7828 7657;7658;7659;7660 7658 743;6949 4 KPSPEPEGEVGPPK VARTARKRKPSPEPEG EGEVGPPKINGEAQPW R K P P K I 0 0 0 0 0 0 3 2 0 0 0 2 0 0 5 1 0 0 0 1 0 0 14 1 1446.7355 Q7Z5L9 Q7Z5L9 358 371 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 0.0015897 103.77 By MS/MS By MS/MS 1 1 34793000 19608000 15185000 3031 2391 3440 7829;7830 7661;7662;7663;7664;7665;7666 7661 4866 6 KPSPQPSSPR QQPAQQPKKPSPQPSS SPQPSSPRQVKRAVVV K K P P R Q 0 1 0 0 0 1 0 0 0 0 0 1 0 0 4 3 0 0 0 0 0 0 10 1 1079.5724 G3V5E1;O75909 G3V5E1 322 331 CCNK Cyclin-K yes no 2 0.0039518 92.781 By MS/MS By matching 1 1 46196000 12453000 33743000 3032 1085 3441 7831;7832 7667 7667 2046 1 KPSPSESPEPWKPFPAVSPEPR RTTSPEPRKPSPSESP PAVSPEPRRPAPAVSP R K P P R R 1 1 0 0 0 0 3 0 0 0 0 2 0 1 8 4 0 1 0 1 0 0 22 2 2445.2329 Q96JM3 Q96JM3 280 301 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 5.0301E-05 100.15 By MS/MS By MS/MS 4 5 177760000 68829000 108930000 3033 2674 3442;3443;3444 7833;7834;7835;7836;7837;7838;7839;7840;7841 7668;7669;7670;7671;7672;7673;7674;7675;7676;7677;7678 7677 5517;5518;5519;5520 11 KPSTPLSEVIVK GRPSQQKRKPSTPLSE PLSEVIVKNLQLALAN R K P V K N 0 0 0 0 0 0 1 0 0 1 1 2 0 0 2 2 1 0 0 2 0 0 12 1 1296.7653 Q92547 Q92547 858 869 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 0.0053372 82.202 By matching By MS/MS 1 1 10207000 6071200 4135900 3034 2583 3445 7842;7843 7679 7679 5304 1 KPSVGVPPPASPSYPR KAPPPVARKPSVGVPP PASPSYPRAEPLTAPP R K P P R A 1 1 0 0 0 0 0 1 0 0 0 1 0 0 6 3 0 0 1 2 0 0 16 1 1634.878 Q9P206 Q9P206 969 984 KIAA1522 Uncharacterized protein KIAA1522 yes yes 3 0.02915 50.202 By MS/MS By MS/MS 1 1 0 0 0 3035 2969 3446 7844;7845 7680;7681 7681 2 KPSVSEEVQATPNK IQSRKVERKPSVSEEV EVQATPNKAGPKLKDP R K P N K A 1 0 1 0 0 1 2 0 0 0 0 2 0 0 2 2 1 0 0 2 0 0 14 1 1512.7784 Q9UKJ3 Q9UKJ3 1105 1118 GPATCH8 G patch domain-containing protein 8 yes yes 2;3 0.0014406 102.72 By MS/MS By MS/MS 2 1 25922000 14179000 11744000 3036 3025 3447 7846;7847;7848 7682;7683 7683 6376 2 KPVTVSPTTPTSPTEGEAS AELDRITRKPVTVSPT SPTEGEAS________ R K P A S - 1 0 0 0 0 0 2 1 0 0 0 1 0 0 4 3 5 0 0 2 0 0 19 1 1884.9317 E9PHI6;Q9Y6G9 E9PHI6 389 407 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 4.1374E-12 144.08 By MS/MS By MS/MS 6 5 1207700000 596220000 611450000 3037 878 3448;3449;3450 7849;7850;7851;7852;7853;7854;7855;7856;7857;7858;7859 7684;7685;7686;7687;7688;7689;7690;7691;7692;7693;7694;7695;7696 7690 1625;1626;7112;7113;7114 13 KQDYQEILDSPIK KLYWRNLRKQDYQEIL EILDSPIK________ R K Q I K - 0 0 0 2 0 2 1 0 0 2 1 2 0 0 1 1 0 0 1 0 0 0 13 1 1575.8144 Q8TBE7 Q8TBE7 400 412 SLC35G2 Solute carrier family 35 member G2 yes yes 2 6.4395E-09 115.09 By matching By MS/MS 1 1 9491400 4032900 5458400 3038 2534 3451 7860;7861 7697 7697 5173 0 KQEGPATQVDSAVGTLPATSPQSTSVQAK SSRISDGKKQEGPATQ QSTSVQAKGTNKLRKP K K Q A K G 4 0 0 1 0 4 1 2 0 0 1 2 0 0 3 4 4 0 0 3 0 0 29 1 2882.4621 J3KQ96;E7ETY2 J3KQ96 1054 1082 TCOF1 yes no 3 2.9655E-14 129.37 By MS/MS By MS/MS 1 1 98912000 49520000 49392000 3039 822 3452 7862;7863 7698;7699 7698 1502 2 KQEGTPEGLYL SKENVLYKKQEGTPEG GTPEGLYL________ K K Q Y L - 0 0 0 0 0 1 2 2 0 0 2 1 0 0 1 0 1 0 1 0 0 0 11 1 1233.6241 P62191 P62191 430 440 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.00080525 85.862 By MS/MS By matching 1 1 15593000 8579700 7013000 3040 1934 3453 7864;7865 7700 7700 8310 1 KQEKISNAK K Q A K 1 0 1 0 0 1 1 0 0 1 0 3 0 0 0 1 0 0 0 0 0 0 9 2 1044.5928 REV__O15480 yes yes 2 0.010507 90.05 By MS/MS By matching 1 1 18917000 10505000 8412300 + 3041 3198 3454 7866;7867 7701 7701 6795 1 KQENVSQEIYEDVEDLKNNSK NDQKVKIKKQENVSQE EDLKNNSKYLKAAKKG K K Q S K Y 0 0 3 2 0 2 4 0 0 1 1 3 0 0 0 2 0 0 1 2 0 0 21 2 2508.198 Q9P2B7 Q9P2B7 283 303 CFAP97 Cilia- and flagella-associated protein 97 yes yes 3 0.0036489 58.755 By MS/MS By MS/MS 1 1 16397000 6632200 9765100 3042 2977 3455 7868;7869 7702;7703 7703 8484 2 KQSFDDNDSEELEDK KKKGQKGKKQSFDDND DSEELEDKDSKSKKTA K K Q D K D 0 0 1 4 0 1 3 0 0 0 1 2 0 1 0 2 0 0 0 0 0 0 15 1 1797.7541 A0A087WUT6;O60841 A0A087WUT6 105 119 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.00093608 113.23 By MS/MS By MS/MS 1 1 17150000 0 17150000 3043 60 3456 7870;7871 7704;7705 7705 104;105 2 KQSFDDNDSEELEDKDSK KKKGQKGKKQSFDDND ELEDKDSKSKKTAKPK K K Q S K S 0 0 1 5 0 1 3 0 0 0 1 3 0 1 0 3 0 0 0 0 0 0 18 2 2127.908 A0A087WUT6;O60841 A0A087WUT6 105 122 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 2.1894E-09 140.56 By MS/MS By MS/MS 3 4 251470000 149160000 102300000 3044 60 3457;3458 7872;7873;7874;7875;7876;7877;7878 7706;7707;7708;7709;7710 7709 104;105 5 KQSGSPTLDTAPNGR NFGKNIYRKQSGSPTL LDTAPNGRYGIGYLMA R K Q G R Y 1 1 1 1 0 1 0 2 0 0 1 1 0 0 2 2 2 0 0 0 0 0 15 1 1527.7641 Q9H2J7 Q9H2J7 697 711 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.00022758 102.03 By MS/MS By MS/MS 1 2 24247000 4279300 19968000 3045 2819 3459;3460 7879;7880;7881 7711;7712;7713 7713 133 5905;5906;7849 1 KQSLGELIGTLNAAK GNWKMNGRKQSLGELI IGTLNAAKVPADTEVV R K Q A K V 2 0 1 0 0 1 1 2 0 1 3 2 0 0 0 1 1 0 0 0 0 0 15 1 1541.8777 P60174 P60174 56 70 TPI1 Triosephosphate isomerase yes yes 2;3 1.298E-95 224.15 By MS/MS By MS/MS 4 4 1358900000 777910000 581000000 3046 1926 3461;3462 7882;7883;7884;7885;7886;7887;7888;7889 7714;7715;7716;7717;7718;7719;7720;7721;7722 7719 94 3718 8 KQTALVELVK SEKERQIKKQTALVEL TALVELVKHKPKATKE K K Q V K H 1 0 0 0 0 1 1 0 0 0 2 2 0 0 0 0 1 0 0 2 0 0 10 1 1127.6914 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;H0YA55;D6RHD5;A0A087WWT3 B7WNR0 434 443 ALB Serum albumin yes no 3 0.0025918 120.63 By MS/MS By MS/MS 1 1 0 0 0 + 3047 314 3463 7890;7891 7723;7724 7724 2 KREEGSDIEDEDMEELLNDTR KKKMNEKRKREEGSDI EELLNDTRLLKKLKKG R K R T R L 0 2 1 4 0 0 6 1 0 1 2 1 1 0 0 1 1 0 0 0 0 0 21 2 2522.1079 F5H5U2;Q8NHQ9 F5H5U2 508 528 DDX55 ATP-dependent RNA helicase DDX55 yes no 3 1.704E-46 176.39 By MS/MS By MS/MS 2 2 175550000 87432000 88113000 3048 979 3464;3465 7892;7893;7894;7895 7725;7726;7727;7728;7729 7728 358 1833 5 KRESESESDETPPAAPQLIK EAAKTAKRKRESESES PAAPQLIKKEKKKSKK R K R I K K 2 1 0 1 0 1 4 0 0 1 1 2 0 0 3 3 1 0 0 0 0 0 20 2 2211.1019 O60832 O60832 448 467 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2;3 0.00024268 109.77 By MS/MS By MS/MS 3 3 288300000 146610000 141690000 3049 1530 3466;3467 7896;7897;7898;7899;7900;7901 7730;7731;7732;7733;7734;7735 7731 2891;2892;2893;7334 6 KRQSPEPSPVTLGR SESKRRCRKRQSPEPS PSPVTLGRRSSGRQGG R K R G R R 0 2 0 0 0 1 1 1 0 0 1 1 0 0 3 2 1 0 0 1 0 0 14 2 1550.8529 Q9NRL2 Q9NRL2 1410 1423 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 3 0.018923 66.784 By MS/MS By matching 1 1 40604000 22363000 18241000 3050 2908 3468 7902;7903 7736 7736 6134 1 KRSSSEDAESLAPR PEVRTGKRKRSSSEDA DAESLAPRSKVKKIIQ R K R P R S 2 2 0 1 0 0 2 0 0 0 1 1 0 0 1 4 0 0 0 0 0 0 14 2 1531.759 Q4G0J3;H0YA82 Q4G0J3 296 309 LARP7 La-related protein 7 yes no 3 0.0015368 105.06 By MS/MS By matching 1 1 17813000 10444000 7368800 3051 2194 3469 7904;7905 7737 7737 4371;4372;4373 1 KRSVQEGENPDDGVR EGMSKRKRKRSVQEGE ENPDDGVRGSPPEDYR R K R V R G 0 2 1 2 0 1 2 2 0 0 0 1 0 0 1 1 0 0 0 2 0 0 15 2 1684.8129 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 15 29 RBM34 RNA-binding protein 34 yes no 3 0.021471 64.52 By matching By MS/MS 1 1 25558000 10984000 14574000 3052 449 3470 7906;7907 7738 7738 840 1 KSAEPSANTTLVSETEEEGSVPAFGAAAK LLSGKSPRKSAEPSAN PAFGAAAKPGMVSAGQ R K S A K P 6 0 1 0 0 0 5 2 0 0 1 2 0 1 2 4 3 0 0 2 0 0 29 1 2877.388 J3KQ96;E7ETY2;Q13428 J3KQ96 159 187 TCOF1 Treacle protein no no 3 3.2067E-06 79.949 By MS/MS By MS/MS 1 1 108180000 54592000 53588000 3053 822;2059 3471 7908;7909 7739;7740;7741 7740 1503;7088 3 KSEAGHASSPDSEVTSLCQK EVPEIFTKKSEAGHAS EVTSLCQKEKAELAPV K K S Q K E 2 0 0 1 1 1 2 1 1 0 1 2 0 0 1 5 1 0 0 1 0 0 20 1 2116.9695 Q6NZY4 Q6NZY4 590 609 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 3 0.010161 53.551 By MS/MS 1 8769600 8769600 0 3054 2310 3472 7910 7742 7742 4660 1 KSESYSESSSDSSSR EDEWRSDRKSESYSES SSSDSSSRYSDWTADA R K S S R Y 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 9 0 0 1 0 0 0 15 1 1621.6704 Q9NSI6;H0Y463;H7BZR9 Q9NSI6 850 864 BRWD1 Bromodomain and WD repeat-containing protein 1 yes no 2 0.031595 43.115 By MS/MS 1 0 0 0 3055 2915 3473 7911 7743 7743 1 KSFLTKYFNK EDDSYEARKSFLTKYF FLTKYFNKQPYPTRRE R K S N K Q 0 0 1 0 0 0 0 0 0 0 1 3 0 2 0 1 1 0 1 0 0 0 10 2 1274.7023 Q9H2P0 Q9H2P0 768 777 ADNP Activity-dependent neuroprotector homeobox protein yes yes 2 0.028662 61.48 By matching By MS/MS 1 1 143450000 72123000 71325000 3056 2822 3474 7912;7913 7744 7744 1 KSFSKEELMSSDLEETAGSTSIPK SFSKPKKKKSFSKEEL AGSTSIPKRKKSTPKE K K S P K R 1 0 0 1 0 0 4 1 0 1 2 3 1 1 1 6 2 0 0 0 0 0 24 2 2600.2527 O00567 O00567 510 533 NOP56 Nucleolar protein 56 yes yes 3 0.01182 63.398 By MS/MS By MS/MS 2 2 68129000 34034000 34095000 3057 1443 3475 7914;7915;7916;7917 7745;7746 7746 510 2649;2650;2653;7285 1 KSGSQDFPQCNTIENTGTK AAAVADKRKSGSQDFP TIENTGTKQSTCSPGD R K S T K Q 0 0 2 1 1 2 1 2 0 1 0 2 0 1 1 2 3 0 0 0 0 0 19 1 2110.9589 E9PHV5;P28290;E7EUL7 E9PHV5 590 608 SSFA2 Sperm-specific antigen 2 yes no 3 0.0041174 61.111 By MS/MS 1 5169000 5169000 0 3058 880 3476 7918 7747 7747 1632 1 KSLSDSESDDSK KEKDGTKRKSLSDSES DSESDDSKSKKKRDAA R K S S K S 0 0 0 3 0 0 1 0 0 0 1 2 0 0 0 5 0 0 0 0 0 0 12 1 1296.5681 Q13185;S4R2Y4 Q13185 92 103 CBX3 Chromobox protein homolog 3 yes no 2 2.0398E-09 140.03 By MS/MS By MS/MS 2 2 31504000 17756000 13748000 3059 2048 3477 7919;7920;7921;7922 7748;7749;7750;7751 7748 4018;4019;4020 2 KSNLDEEVNVIPPHTPVR FETQRTPRKSNLDEEV IPPHTPVRTVMNTIQQ R K S V R T 0 1 2 1 0 0 2 0 1 1 1 1 0 0 3 1 1 0 0 3 0 0 18 1 2043.0749 P06400 P06400 359 376 RB1 Retinoblastoma-associated protein yes yes 3 0.01408 64.89 By MS/MS By MS/MS 1 1 42326000 26502000 15824000 3060 1645 3478 7923;7924 7752;7753 7753 7373 1 KSNQIPTEVR AKEQLKIRKSNQIPTE NQIPTEVRSKAEEVVS R K S V R S 0 1 1 0 0 1 1 0 0 1 0 1 0 0 1 1 1 0 0 1 0 0 10 1 1170.6357 Q9BWH2 Q9BWH2 150 159 FUNDC2 FUN14 domain-containing protein 2 yes yes 2 0.003806 101.32 By matching By MS/MS 1 1 19065000 10556000 8508900 3061 2765 3479 7925;7926 7754 7754 5757 1 KSNWNCYYETLWMESRLEESTIR SQTLKGGRKSNWNCYY RLEESTIRDLYTSK__ R K S I R D 0 2 2 0 1 0 4 0 0 1 2 1 1 0 0 3 2 2 2 0 0 0 23 2 2994.364 H7C5V1 H7C5V1 263 285 THUMPD2 yes yes 3 0.02691 50.539 By MS/MS 1 0 0 0 3062 1293 3480 7927 7755 7755 466 2393 1 KSPPKADEK PENRFLMRKSPPKADE SPPKADEKERKNRERE R K S E K E 1 0 0 1 0 0 1 0 0 0 0 3 0 0 2 1 0 0 0 0 0 0 9 2 998.53966 E9PG73;Q13427;C9JM79 E9PG73 274 282 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 2 0.0083966 88.803 By matching By MS/MS 1 1 3354500 164120 3190400 3063 871 3481 7928;7929 7756 7756 1603 1 KSPSGPVKSPPLSPVGTTPVK QNHDLTHRKSPSGPVK PVGTTPVKLKRAAPKE R K S V K L 0 0 0 0 0 0 0 2 0 0 1 3 0 0 6 4 2 0 0 3 0 0 21 2 2059.1677 C9J4K0;Q9BVC5 C9J4K0 139 159 C2orf49 Ashwin yes no 3 0.0051021 60.669 By MS/MS By MS/MS 1 1 83492000 20612000 62880000 3064 636 3482;3483 7930;7931 7757;7758 7758 1188;1189;1190;1191;7014;7015 2 KSPVFSDEDSDLDFDISKLEQQSK NSSKSDLRKSPVFSDE SKLEQQSKVQNKGQGK R K S S K V 0 0 0 5 0 2 2 0 0 1 2 3 0 2 1 5 0 0 0 1 0 0 24 2 2756.3028 U3KQ48;O00566 U3KQ48 162 185 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes no 3 4.5572E-06 100.47 By MS/MS 1 60690000 0 60690000 3065 1442 3484 7932 7759 7759 2646;2647;2648 1 KSSADTEFSDECTTAER SWRSNNSRKSSADTEF DECTTAERVLMKSPSP R K S E R V 2 1 0 2 1 0 3 0 0 0 0 1 0 1 0 3 3 0 0 0 0 0 17 1 1932.8007 Q9H6S0 Q9H6S0 1200 1216 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2;3 0.00012156 105.5 By MS/MS By MS/MS 2 2 86345000 47619000 38726000 3066 2843 3485 7933;7934;7935;7936 7760;7761;7762 7761 5981 2 KSSGFLNLIK EKKKRDSRKSSGFLNL SGFLNLIKSRSKSERP R K S I K S 0 0 1 0 0 0 0 1 0 1 2 2 0 1 0 2 0 0 0 0 0 0 10 1 1105.6495 Q5VZK9;A0A0U1RQQ1 Q5VZK9 1066 1075 LRRC16A Leucine-rich repeat-containing protein 16A yes no 2 0.029122 62.088 By MS/MS By MS/MS 1 1 6580900 4234000 2346900 3067 2282 3486 7937;7938 7763;7764 7763 2 KSSLVTSK TPQDLPQRKSSLVTSK KSSLVTSKLAG_____ R K S S K L 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 3 1 0 0 1 0 0 8 1 848.49673 A6NMQ3;Q5T5H1;O43768 A6NMQ3 130 137 ENSA Alpha-endosulfine yes no 2 0.021757 77.744 By MS/MS 1 10243000 0 10243000 3068 480 3487 7939 7765 7765 872 0 KSSTSDWPTDNQDGWDGKQENEER RIRKRGNRKSSTSDWP GKQENEERLFGSQEIM R K S E R L 0 1 2 4 0 2 3 2 0 0 0 2 0 0 1 3 2 2 0 0 0 0 24 2 2808.1859 Q92794;A5PLL3 Q92794 446 469 KAT6A;MYST3 Histone acetyltransferase KAT6A;Histone acetyltransferase yes no 3 6.6798E-05 83.834 By MS/MS By MS/MS 1 1 22739000 13703000 9036800 3069 2602 3488 7940;7941 7766;7767 7766 5342 2 KTAHNSEADLEESFNEHELEPSSPK MVYCRKHKKTAHNSEA ELEPSSPKSKKKSRKG K K T P K S 2 0 2 1 0 0 6 0 2 0 2 2 0 1 2 4 1 0 0 0 0 0 25 1 2824.2788 Q8IWS0 Q8IWS0 133 157 PHF6 PHD finger protein 6 yes yes 3;4 7.4192E-06 81.379 By MS/MS By MS/MS 2 2 204050000 115060000 88984000 3070 2431 3489 7942;7943;7944;7945 7768;7769;7770;7771;7772;7773 7769 4972;4973;4974 6 KTAPTLSPEHWK KSGPPELRKTAPTLSP TLSPEHWKAVPPVSPE R K T W K A 1 0 0 0 0 0 1 0 1 0 1 2 0 0 2 1 2 1 0 0 0 0 12 1 1393.7354 Q96JM3 Q96JM3 399 410 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 0.00073542 86.777 By MS/MS By MS/MS 2 2 86407000 34957000 51450000 3071 2674 3490 7946;7947;7948;7949 7774;7775;7776 7776 5521 3 KTATQTGHTLLEDYQIVDNSQR IGIKAMVKKTATQTGH QIVDNSQRENQEGAAN K K T Q R E 1 1 1 2 0 3 1 1 1 1 2 1 0 0 0 1 4 0 1 1 0 0 22 1 2517.2459 Q8N0X7 Q8N0X7 615 636 SPG20 Spartin yes yes 3 7.5727E-08 130.01 By MS/MS By MS/MS 1 1 22004000 10727000 11278000 3072 2452 3491 7950;7951 7777;7778;7779;7780 7777 8392 4 KTEFLDLDNSPLSPPSPR TKDKEEKKKTEFLDLD PLSPPSPRTKSRTHTR K K T P R T 0 1 1 2 0 0 1 0 0 0 3 1 0 1 4 3 1 0 0 0 0 0 18 1 2012.0215 Q8NCF5 Q8NCF5 189 206 NFATC2IP NFATC2-interacting protein yes yes 3 0.00011929 111.97 By MS/MS By MS/MS 1 1 13912000 7199300 6713200 3073 2502 3492 7952;7953 7781;7782 7782 5108 2 KTESPIKLSPATPSR VIKTPVVKKTESPIKL LSPATPSRKRSVAVSD K K T S R K 1 1 0 0 0 0 1 0 0 1 1 2 0 0 3 3 2 0 0 0 0 0 15 2 1610.8992 Q9Y6X9 Q9Y6X9 722 736 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2;3 0.01227 69.422 By MS/MS By MS/MS 1 2 15016000 7422700 7593000 3074 3155 3493;3494 7954;7955;7956 7783;7784;7785 7783 6748;7959 1 KTGDDALNTSNGTAPFKLGR K T G R 2 1 2 2 0 0 0 3 0 0 2 2 0 1 1 1 3 0 0 0 0 0 20 2 2062.0443 REV__Q8IWK6 yes yes 2 0.027863 58.04 By MS/MS 1 10962000 0 10962000 + 3075 3217 3495 7957 7786 7786 6813 1 KTGSYGALAEITASK ATWRLGLRKTGSYGAL LAEITASKEGQKEKDT R K T S K E 3 0 0 0 0 0 1 2 0 1 1 2 0 0 0 2 2 0 1 0 0 0 15 1 1495.7882 O14974;F8VZN8;H0YIS4;H0YHI8 O14974 442 456 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.0066665 77.554 By MS/MS By matching 1 1 13710000 7423600 6286100 3076 1463 3496 7958;7959 7787 7787 2720 1 KTLADLEEQKQHYSSQQK K T Q K 1 0 0 1 0 4 2 0 1 0 2 3 0 0 0 2 1 0 1 0 0 0 18 2 2160.0811 REV__O95347 yes yes 2 0.0037072 62.088 By matching By MS/MS 1 1 494050000 291470000 202580000 + 3077 3201 3497 7960;7961 7788 7788 1 KTPIQILGQEPDAEMVEYLI FHSNTLERKTPIQILG AEMVEYLI________ R K T L I - 1 0 0 1 0 2 3 1 0 3 2 1 1 0 2 0 1 0 1 1 0 0 20 1 2286.1817 Q4VCS5;E7ERM3 Q4VCS5 1065 1084 AMOT Angiomotin yes no 3 0.010722 92.39 By MS/MS 1 4520100 0 4520100 3078 2197 3498 7962 7789 7789 878 8361 1 KTPLALAGSPTPK PPSSPLLKKTPLALAG LAGSPTPKNPEDKSPQ K K T P K N 2 0 0 0 0 0 0 1 0 0 2 2 0 0 3 1 2 0 0 0 0 0 13 1 1279.75 B9EGQ5;M0QXA7;O95785 B9EGQ5 169 181 WIZ Protein Wiz yes no 2 0.021456 67.385 By matching By MS/MS 1 1 43532000 18011000 25521000 3079 612 3499 7963;7964 7790 7790 1107 1 KTPQGPPEIYSDTQFPSLQSTAK GARLTTTRKTPQGPPE PSLQSTAKHVESRKDK R K T A K H 1 0 0 1 0 3 1 1 0 1 1 2 0 1 4 3 3 0 1 0 0 0 23 1 2519.2544 Q9UKY7;D6R9V8;H0Y8K3;D6RFH2;D6RDN0 Q9UKY7 181 203 CDV3 Protein CDV3 homolog yes no 2;3 4.4399E-05 106.69 By MS/MS By matching 2 2 375440000 194240000 181200000 3080 3034 3500 7965;7966;7967;7968 7791;7792 7792 6389;8499 2 KTPSKPPAQLSPSVPK LDLNQEEKKTPSKPPA QLSPSVPKRPKLPAPT K K T P K R 1 0 0 0 0 1 0 0 0 0 1 3 0 0 5 3 1 0 0 1 0 0 16 2 1660.9512 F5H8D7;P18887;M0QYS5 F5H8D7 225 240 XRCC1 DNA repair protein XRCC1 yes no 3 1.3077E-06 126.43 By MS/MS By MS/MS 1 1 37349000 18732000 18617000 3081 988 3501 7969;7970 7793;7794 7794 1859;1860 2 KTQQLHPVLQKPSVFGNDSDDDDETSVSESLQR QYGLILPKKTQQLHPV SVSESLQREAAKKQAM K K T Q R E 0 1 1 5 0 4 2 1 1 0 3 2 0 1 2 5 2 0 0 3 0 0 33 2 3698.766 Q9H0G5 Q9H0G5 15 47 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 4 0.00021343 60.48 By MS/MS By MS/MS 1 1 144750000 60968000 83781000 3082 2802 3502 7971;7972 7795;7796 7796 5858;5859;5860 2 KTSASDVTNIYPGDAGK KKARDEGKKTSASDVT IYPGDAGKAGDQLVPD K K T G K A 2 0 1 2 0 0 0 2 0 1 0 2 0 0 1 2 2 0 1 1 0 0 17 1 1722.8424 Q15042 Q15042 535 551 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2 0.00069794 119.04 By MS/MS 1 8980500 0 8980500 3083 2122 3503 7973 7797 7797 7591 1 KTSAVSSPLLDQQR SSASKKDRKTSAVSSP SPLLDQQRNSKTNQSK R K T Q R N 1 1 0 1 0 2 0 0 0 0 2 1 0 0 1 3 1 0 0 1 0 0 14 1 1528.8209 Q5T200;A0A087WX14 Q5T200 236 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.00027892 118.2 By matching By MS/MS 1 1 19897000 10792000 9105500 3084 2238 3504 7974;7975 7798 7798 4476 1 KTSDANETEDHLESLICK GGQPHKRRKTSDANET HLESLICKVGEKSACS R K T C K V 1 0 1 2 1 0 3 0 1 1 2 2 0 0 0 2 2 0 0 0 0 0 18 1 2088.9634 F2Z2T1;Q09161 F2Z2T1 20 37 NCBP1 Nuclear cap-binding protein subunit 1 yes no 3 1.5293E-05 124.45 By MS/MS By MS/MS 1 1 432060000 204030000 228020000 3085 932 3505 7976;7977 7799;7800 7799 1747;7124 2 KTSFDQDSDVDIFPSDFPTEPPSLPR KTTSKKPKKTSFDQDS TEPPSLPRTGRARKEV K K T P R T 0 1 0 5 0 1 1 0 0 1 1 1 0 3 5 4 2 0 0 1 0 0 26 1 2936.3716 Q02880 Q02880 1574 1599 TOP2B DNA topoisomerase 2-beta yes yes 3 1.1386E-06 98.631 By MS/MS 1 254210000 0 254210000 3086 1989 3506 7978 7801 7801 7518 1 KTSPASLDFPESQK WKLSPDQRKTSPASLD LDFPESQKSSRGGSPD R K T Q K S 1 0 0 1 0 1 1 0 0 0 1 2 0 1 2 3 1 0 0 0 0 0 14 1 1533.7675 Q96JM3 Q96JM3 457 470 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.029463 44.312 By MS/MS By matching 1 1 17183000 11369000 5813700 3087 2674 3507 7979;7980 7802 7802 0 KTSSDDESEEDEDDLLQR AWAETTKRKTSSDDES DEDDLLQRTGNFISTS R K T Q R T 0 1 0 5 0 1 4 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 18 1 2109.8822 Q9Y5J1 Q9Y5J1 203 220 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 2;3 1.6272E-18 137.09 By MS/MS By MS/MS 1 1 0 0 0 3088 3129 3508;3509 7981;7982 7803;7804 7804 6703;6704;6705;7955 2 KTVEDEDQDSEEEKDNDSYIK SVNDKNLKKTVEDEDQ KDNDSYIKERSDIPSG K K T I K E 0 0 1 5 0 1 5 0 0 1 0 3 0 0 0 2 1 0 1 1 0 0 21 2 2515.0722 Q9Y5T5 Q9Y5T5 406 426 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 3 0.0073928 64.545 By MS/MS By matching 1 1 31735000 16218000 15517000 3089 3135 3510 7983;7984 7805 7805 6714;6715 1 KTVFSPTLPAAR TNDQGARRKTVFSPTL SPTLPAARSSLGSLQT R K T A R S 2 1 0 0 0 0 0 0 0 0 1 1 0 1 2 1 2 0 0 1 0 0 12 1 1286.7347 C9J6P4;Q7Z2W4 C9J6P4 374 385 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.029673 63.16 By matching By MS/MS 1 1 15072000 8164200 6907800 3090 642 3511 7985;7986 7806 7806 1198 1 KTVQGPPTSDDIFER SATSVATKKTVQGPPT TSDDIFEREYKYGAHN K K T E R E 0 1 0 2 0 1 1 1 0 1 0 1 0 1 2 1 2 0 0 1 0 0 15 1 1688.837 P04181 P04181 32 46 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 3 0.031803 42.52 By MS/MS 1 0 0 0 3091 1634 3512 7987 7807 7807 1 KTVTYEDPQAVGGLASALDNR GNSLAEQRKTVTYEDP LASALDNRKQSSEGTF R K T N R K 3 1 1 2 0 1 1 2 0 0 2 1 0 0 1 1 2 0 1 2 0 0 21 1 2204.1073 F5H3S6;B7Z2U2;Q6ZVM7 F5H3S6 252 272 TOM1L2 TOM1-like protein 2 yes no 2;3 7.8289E-05 110.98 By MS/MS By MS/MS 2 3 63215000 24946000 38269000 3092 587 3513 7988;7989;7990;7991;7992 7808;7809;7810;7811 7809 6998;6999;8080 4 KTVTYEDPQAVGGLASALDNRK GNSLAEQRKTVTYEDP ASALDNRKQSSEGTFL R K T R K Q 3 1 1 2 0 1 1 2 0 0 2 2 0 0 1 1 2 0 1 2 0 0 22 2 2332.2023 F5H3S6;B7Z2U2;Q6ZVM7 F5H3S6 252 273 TOM1L2 TOM1-like protein 2 yes no 3 1.8869E-05 117.22 By MS/MS By MS/MS 1 1 12404000 5840500 6563400 3093 587 3514 7993;7994 7812;7813;7814 7814 6998;6999;8080 3 KVDEGAGDSAAVASGGAQTLALAGSPAPSGHPK ADKVRKRRKVDEGAGD PAPSGHPKAGHSENGV R K V P K A 8 0 0 2 0 1 1 6 1 0 2 2 0 0 3 4 1 0 0 2 0 0 33 1 2973.4792 A0A0A0MRN5;Q9NZT2 A0A0A0MRN5 408 440 OGFR Opioid growth factor receptor yes no 3 0.0013844 54.856 By MS/MS By matching 1 1 10351000 5211600 5139100 3094 225 3515 7995;7996 7815 7815 398 1 KVEEDLKADEPSSEESDLEIDK KEEKPDSKKVEEDLKA ESDLEIDKEGVIEPDT K K V D K E 1 0 0 4 0 0 6 0 0 1 2 3 0 0 1 3 0 0 0 1 0 0 22 2 2504.1654 F6VDH7;Q3KNR6;P50502 F6VDH7 27 48 ST13 Hsc70-interacting protein yes no 3 0.00028506 84.107 By MS/MS By MS/MS 2 2 65293000 28824000 36469000 3095 996 3516;3517 7997;7998;7999;8000 7816;7817;7818;7819 7817 1871;1872;1873 4 KVEEEGSPGDPDHEASTQGR PHPLEGSRKVEEEGSP HEASTQGRTCGPEHSK R K V G R T 1 1 0 2 0 1 4 3 1 0 0 1 0 0 2 2 1 0 0 1 0 0 20 1 2123.9356 A0A0A0MRN5;Q9NZT2 A0A0A0MRN5 257 276 OGFR Opioid growth factor receptor yes no 3 0.0074265 56.485 By matching By MS/MS 1 1 27074000 14814000 12261000 3096 225 3518 8001;8002 7820 7820 399 1 KVEEEQEADEEDVSEEEAESK SESAQPLKKVEEEQEA SEEEAESKEGTNKDFP K K V S K E 2 0 0 2 0 1 10 0 0 0 0 2 0 0 0 2 0 0 0 2 0 0 21 1 2437.014 Q9H3N1 Q9H3N1 234 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2;3 8.8249E-60 185.06 By MS/MS By MS/MS 3 3 1294200000 738860000 555290000 3097 2827 3519 8003;8004;8005;8006;8007;8008 7821;7822;7823;7824;7825;7826;7827;7828;7829;7830 7822 5929 10 KVEGNFNPFASPQK EFNTQPHRKVEGNFNP NPFASPQKNRQSDENN R K V Q K N 1 0 2 0 0 1 1 1 0 0 0 2 0 2 2 1 0 0 0 1 0 0 14 1 1561.7889 Q5TH58;Q9H6K1 Q5TH58 131 144 C6orf106 Uncharacterized protein C6orf106 yes no 2 0.0013117 111.33 By MS/MS By matching 1 1 10943000 6266800 4676600 3098 2257 3520 8009;8010 7831;7832 7832 4513 2 KVEPVPVTKQPTPPSEAAASK DASKIPGKKVEPVPVT PSEAAASKKKPGQKKS K K V S K K 3 0 0 0 0 1 2 0 0 0 0 3 0 0 5 2 2 0 0 3 0 0 21 2 2160.179 Q86UP2 Q86UP2 142 162 KTN1 Kinectin yes yes 3 8.7969E-05 119.18 By MS/MS By MS/MS 1 1 43849000 25524000 18325000 3099 2402 3521 8011;8012 7833;7834 7833 7695 2 KVLSPTAAKPSPFEGK GIKIKKKKKVLSPTAA KPSPFEGKTSTEPSTA K K V G K T 2 0 0 0 0 0 1 1 0 0 1 3 0 1 3 2 1 0 0 1 0 0 16 2 1655.9247 Q96QC0 Q96QC0 310 325 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 3 0.01106 70.117 By MS/MS By MS/MS 1 1 52299000 26685000 25614000 3100 2701 3522 8013;8014 7835;7836 7835 5572 2 KVMDSDEDDDY TTVKFNRRKVMDSDED DSDEDDDY________ R K V D Y - 0 0 0 5 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 11 1 1330.4871 K7EQA1;O14737 K7EQA1 77 87 PDCD5 Programmed cell death protein 5 yes no 2 2.5739E-11 162.93 By MS/MS By MS/MS 2 2 406540000 220370000 186170000 3101 1390 3523;3524 8015;8016;8017;8018 7837;7838;7839;7840;7841;7842;7843;7844;7845 7842 486 2559 9 KVPQVSTPTLVEVSR ALLVRYTKKVPQVSTP PTLVEVSRNLGKVGSK K K V S R N 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 2 0 0 4 0 0 15 1 1638.9305 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;H0YA55;D6RHD5;A0A087WWT3;CON__P02769 B7WNR0 323 337 ALB Serum albumin yes no 3 0.00030092 90.498 By MS/MS By MS/MS 1 1 16228000 9429100 6798500 + 3102 314 3525 8019;8020 7846;7847 7847 2 KVPSFTFTPTVTYQR TSTYAGIRKVPSFTFT TPTVTYQRGGEAVSSG R K V Q R G 0 1 0 0 0 1 0 0 0 0 0 1 0 2 2 1 4 0 1 2 0 0 15 1 1770.9305 A0A0A0MSX4;Q9Y6N7 A0A0A0MSX4 817 831 ROBO1 Roundabout homolog 1 yes no 2;3 0.00071039 105 By MS/MS By MS/MS 3 4 34863000 13504000 21360000 3103 262 3526;3527 8021;8022;8023;8024;8025;8026;8027 7848;7849;7850;7851;7852;7853 7852 454;6909;6910;6911;8017 6 KVQSTADIFGDEEGDLFKEK HSKPSKTRKVQSTADI EGDLFKEKAVASPEAT R K V E K A 1 0 0 3 0 1 3 2 0 1 1 3 0 2 0 1 1 0 0 1 0 0 20 2 2255.0958 A0A096LPC5;J3KP36;Q9Y4E1 A0A096LPC5 475 494 FAM21C WASH complex subunit FAM21C yes no 3 0.011732 61.862 By MS/MS 1 5704000 5704000 0 3104 183 3528 8028 7854 7854 313;6876 1 KVQVAALQASPPLDQDDR AIVVKRPRKVQVAALQ PPLDQDDRAFEVMDEF R K V D R A 3 1 0 3 0 3 0 0 0 0 2 1 0 0 2 1 0 0 0 2 0 0 18 1 1950.0171 A0A1B0GTW1;Q9UDY2;U3KQJ2;B1AN86 A0A1B0GTW1 180 197 TJP2 Tight junction protein ZO-2 yes no 2;3 7.8566E-05 100.85 By MS/MS By MS/MS 2 2 36302000 16630000 19672000 3105 415 3529 8029;8030;8031;8032 7855;7856;7857 7855 775 3 KVSDVIWNSLSR VSSRELVKKVSDVIWN VIWNSLSRSYFKDRAH K K V S R S 0 1 1 1 0 0 0 0 0 1 1 1 0 0 0 3 0 1 0 2 0 0 12 1 1402.7569 Q9GZQ5;E7ENS2;E7EPR4;E7ET29;E7EN32;O00255 Q9GZQ5 120 131 MEN1 Menin yes no 2 0.027465 45.908 By matching By MS/MS 1 1 45078000 23432000 21646000 3106 794 3530 8033;8034 7858 7858 1416;1417;1418 0 KVSGDSSHTETTAEEVPEDPLLK TLRVDRKRKVSGDSSH VPEDPLLKAKRRRVSK R K V L K A 1 0 0 2 0 0 4 1 1 0 2 2 0 0 2 3 3 0 0 2 0 0 23 1 2468.1918 Q6W2J9;H7BYY2;H7C2V9;A6NE70 Q6W2J9 1137 1159 BCOR BCL-6 corepressor yes no 3 1.8995E-05 94.036 By MS/MS By MS/MS 1 1 69647000 36814000 32832000 3107 2343 3531 8035;8036 7859;7860 7859 4741 2 KVSGTLDTPEK LVLRKKKKKVSGTLDT GTLDTPEKTVDSQGPT K K V E K T 0 0 0 1 0 0 1 1 0 0 1 2 0 0 1 1 2 0 0 1 0 0 11 1 1173.6241 H7BZL0;C9J808;Q9BYG3 H7BZL0 25 35 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 2 0.009514 96.745 By matching By MS/MS 1 1 9227600 5632100 3595500 3108 643 3532 8037;8038 7861 7861 1201;7018;7019 1 KVSGTLDTPEKTVDSQGPTPVCTPTFLER LVLRKKKKKVSGTLDT CTPTFLERRKSQVAEL K K V E R R 0 1 0 2 1 1 2 2 0 0 2 2 0 1 4 2 6 0 0 3 0 0 29 2 3159.5758 H7BZL0;C9J808;Q9BYG3 H7BZL0 25 53 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 3 0.0017674 60.993 By MS/MS By MS/MS 1 1 40176000 25532000 14645000 3109 643 3533 8039;8040 7862;7863 7862 1201;7018;7019;7020;7021 2 KVSSAEGAAKEEPK ________________ GAAKEEPKRRSARLSA R K V P K R 3 0 0 0 0 0 3 1 0 0 0 3 0 0 1 2 0 0 0 1 0 0 14 2 1429.7413 P05114;F2Z2W6;F2Z2Y5;H7BXJ5 P05114 5 18 HMGN1 Non-histone chromosomal protein HMG-14 yes no 3 0.021221 65.423 By MS/MS 1 9475800 9475800 0 3110 1638 3534 8041 7864 7864 3091;3092 1 KVSVSESNVLLDEEVLTDPK SQQHPHLRKVSVSESN EEVLTDPKIQALLLTV R K V P K I 0 0 1 2 0 0 3 0 0 0 3 2 0 0 1 3 1 0 0 4 0 0 20 1 2200.1475 H0Y465;P21359;J3QSG6 H0Y465 2240 2259 NF1 Neurofibromin;Neurofibromin truncated yes no 2;3 0.00025933 86.439 By MS/MS By MS/MS 1 2 23690000 11536000 12154000 3111 1118 3535 8042;8043;8044 7865;7866;7867 7865 2121;2122 2 KVTLSSSK ENKARAEKKVTLSSSK KVTLSSSKNLKPSSET K K V S K N 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 3 1 0 0 1 0 0 8 1 848.49673 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6 F8W7U3 428 435 FAM21A WASH complex subunit FAM21A yes no 2 0.012715 92.239 By MS/MS By matching 1 1 13022000 5361400 7660500 3112 814 3536 8045;8046 7868 7868 1474 1 KVTSPLQSPTK RPHPPQLRKVTSPLQS SPLQSPTKAKPKVQED R K V T K A 0 0 0 0 0 1 0 0 0 0 1 2 0 0 2 2 2 0 0 1 0 0 11 1 1184.6765 A0A1B0GUM1;A0A1B0GUN0;H0YDE2;A0A1B0GTN9;E9PKC0;Q6IQ23 A0A1B0GUM1 121 131 PLEKHA7 Pleckstrin homology domain-containing family A member 7 yes no 2 0.0061101 87.447 By matching By MS/MS 1 1 12845000 6680900 6164300 3113 411 3537 8047;8048 7869 7869 757;758 1 KVVDYSQFQESDDADEDYGR MSRPVRNRKVVDYSQF DADEDYGRDSGPPTKK R K V G R D 1 1 0 5 0 2 2 1 0 0 0 1 0 1 0 2 0 0 2 2 0 0 20 1 2364.9982 Q9H1E3 Q9H1E3 9 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 9.9556E-119 222.92 By MS/MS By MS/MS 14 19 1384000000 683460000 700500000 3114 2816 3538 8049;8050;8051;8052;8053;8054;8055;8056;8057;8058;8059;8060;8061;8062;8063;8064;8065;8066;8067;8068;8069;8070;8071;8072;8073;8074;8075;8076;8077;8078;8079;8080;8081 7870;7871;7872;7873;7874;7875;7876;7877;7878;7879;7880;7881;7882;7883;7884;7885;7886;7887;7888;7889;7890;7891;7892;7893;7894;7895;7896;7897;7898;7899;7900;7901;7902;7903;7904;7905;7906;7907;7908;7909;7910;7911;7912;7913;7914;7915;7916;7917;7918;7919;7920;7921 7875 5893;5894 51 KVVEAVNSDSDSEFGIPK PKRAPKQKKVVEAVNS DSEFGIPKKTTTPKGK K K V P K K 1 0 1 2 0 0 2 1 0 1 0 2 0 1 1 3 0 0 0 3 0 0 18 1 1919.9476 Q02880 Q02880 1515 1532 TOP2B DNA topoisomerase 2-beta yes yes 2 2.7155E-10 143.04 By MS/MS By MS/MS 1 1 96558000 42698000 53860000 3115 1989 3539 8082;8083 7922;7923 7923 3817;3818;3819 2 KVVTSPR PKKISSPKKVVTSPRK KKVVTSPRKVPPPSPK K K V P R K 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 2 0 0 7 1 785.47594 A0A075B754;Q96QE3 A0A075B754 1210 1216 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.00034883 74.92 By MS/MS By MS/MS 2 1 7175000 2742000 4433000 3116 18 3540 8084;8085;8086 7924;7925 7925 33;6837 1 KVVVSPTK KAAATSAKKVVVSPTK KVVVSPTKKVAVATPA K K V T K K 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 70 NCL Nucleolin yes no 2 0.020979 139.32 By MS/MS By MS/MS 1 1 395770000 256440000 139330000 3117 1732 3541 8087;8088 7926;7927;7928 7927 3263 3 KVVVSPTKK KAAATSAKKVVVSPTK VVVSPTKKVAVATPAK K K V K K V 0 0 0 0 0 0 0 0 0 0 0 3 0 0 1 1 1 0 0 3 0 0 9 2 984.63317 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 71 NCL Nucleolin yes no 2;3 0.00029874 152.64 By MS/MS By MS/MS 3 2 976630000 378350000 598270000 3118 1732 3542 8089;8090;8091;8092;8093 7929;7930;7931;7932;7933;7934 7934 3263 6 KVVYKQYQDDSFTK NRIGKHYKKVVYKQYQ YQDDSFTKRLEDPSSE K K V T K R 0 0 0 2 0 2 0 0 0 0 0 3 0 1 0 1 1 0 2 2 0 0 14 2 1747.8781 CON__Q28107 CON__Q28107 393 406 yes yes 3 0.01942 58.268 By MS/MS 1 0 0 0 + 3119 717 3543 8094 7935 7935 8114;8115 1 KVYEDSGIPLPAESPK QIKATVKRKVYEDSGI PLPAESPKKGPKKVAS R K V P K K 1 0 0 1 0 0 2 1 0 1 1 2 0 0 3 2 0 0 1 1 0 0 16 1 1728.8934 F8W038;H0YIS7;Q8IXM2;F8W1H0 F8W038 83 98 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 2;3 2.1205E-31 166.61 By MS/MS By MS/MS 2 2 195790000 104010000 91783000 3120 1028 3544 8095;8096;8097;8098 7936;7937;7938;7939 7936 1924 4 KWSLNTYK MEKLELVRKWSLNTYK KWSLNTYKCTRQIISE R K W Y K C 0 0 1 0 0 0 0 0 0 0 1 2 0 0 0 1 1 1 1 0 0 0 8 1 1038.5498 P53367 P53367 130 137 ARFIP1 Arfaptin-1 yes yes 2 0.012905 91.469 By MS/MS By MS/MS 1 1 156340000 76857000 79479000 3121 1894 3545 8099;8100 7940;7941 7940 3669 2 KYEQGFITDPVVLSPK ANEVRKVKKYEQGFIT DPVVLSPKDRVRDVFE K K Y P K D 0 0 0 1 0 1 1 1 0 1 1 2 0 1 2 1 1 0 1 2 0 0 16 1 1819.972 H0Y4R1;P12268 H0Y4R1 41 56 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 2;3 0.0060142 62.847 By MS/MS 2 11194000 0 11194000 3122 1121 3546 8101;8102 7942;7943 7943 2131 2 KYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR RDKAERAKKYGGSVGS SQEPPTKREYDQCRIQ K K Y K R E 1 1 0 0 0 2 2 4 0 0 0 2 0 0 10 5 1 0 1 3 0 0 32 2 3210.6309 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323 E9PS08 36 67 UBXN1 UBX domain-containing protein 1 yes no 4 0.0083543 52.931 By MS/MS By MS/MS 1 1 36359000 7755400 28604000 3123 48 3547 8103;8104 7944;7945 7945 88;89 1 KYIEIDSDEEPR APGKSQKRKYIEIDSD IDSDEEPRGELLSLRD R K Y P R G 0 1 0 2 0 0 3 0 0 2 0 1 0 0 1 1 0 0 1 0 0 0 12 1 1492.7046 E7EW05;Q9NVU7 E7EW05 542 553 SDAD1 Protein SDA1 homolog yes no 2 2.8907E-11 151.49 By MS/MS By MS/MS 1 1 65253000 38714000 26539000 3124 832 3548 8105;8106 7946;7947 7947 1553 2 KYSEVDDSLPSGGEKPSK QRTARAKRKYSEVDDS SGGEKPSKNETGLLSS R K Y S K N 0 0 0 2 0 0 2 2 0 0 1 3 0 0 2 4 0 0 1 1 0 0 18 2 1921.9269 Q05D32;H0YNU2;H0YNW9;H0YMH7 Q05D32 26 43 CTDSPL2 CTD small phosphatase-like protein 2 yes no 3 0.0012665 90.978 By MS/MS By matching 1 1 22086000 12727000 9359700 3125 2005 3549 8107;8108 7948 7948 3867 1 KYSSLNLFDTYK TAKGKDGKKYSSLNLF LNLFDTYKGKSLEIQK K K Y Y K G 0 0 1 1 0 0 0 0 0 0 2 2 0 1 0 2 1 0 2 0 0 0 12 1 1477.7453 P48634 P48634 16 27 PRRC2A Protein PRRC2A yes yes 2 0.024161 69.314 By matching By MS/MS 1 1 6878900 4020000 2858900 3126 1846 3550 8109;8110 7949 7949 3542;8284 0 KYVGEKGIDIIIEMLANVNLSK VNYIDKIKKYVGEKGI LANVNLSKDLSLLSHG K K Y S K D 1 0 2 1 0 0 2 2 0 4 2 3 1 0 0 1 0 0 1 2 0 0 22 2 2446.3505 A6NP24;Q08257 A6NP24 211 232 CRYZ Quinone oxidoreductase yes no 2 0.018021 59.9 By MS/MS 1 0 0 0 3127 485 3551 8111 7950 7950 189 883;8054 1 KYVISDEEEEDDD DKANKKHKKYVISDEE DEEEEDDD________ K K Y D D - 0 0 0 4 0 0 4 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 13 1 1584.6315 Q8WVC0 Q8WVC0 654 666 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 0.0055361 84.468 By MS/MS By matching 1 1 138530000 72171000 66359000 3128 2559 3552 8112;8113 7951 7951 5231 0 LAAAEETAVSPR RVWSLERRLAAAEETA EETAVSPRKSPRPAGP R L A P R K 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1213.6303 Q9BUH6 Q9BUH6 139 150 C9orf142 Protein PAXX yes yes 2 7.9857E-11 146 By MS/MS By MS/MS 1 1 166500000 91937000 74563000 3129 2755 3553 8114;8115 7952;7953 7953 5731 2 LAAEVYKDMPETSFTR GEDVENSRLAAEVYKD MPETSFTRTISNPEVV R L A T R T 2 1 0 1 0 0 2 0 0 0 1 1 1 1 1 1 2 0 1 1 0 0 16 1 1856.8978 A8MQ02;J3KN01;P55196;Q5TIG5;F8W9I4;E9PFY5 A8MQ02 157 172 MLLT4 Afadin yes no 2 0.00011837 111.12 By MS/MS By MS/MS 2 2 32270000 16231000 16039000 3130 494 3554 8116;8117;8118;8119 7954;7955;7956;7957 7956 192 8058 4 LAAGRPFNTYPR AGLASGAKLAAGRPFN RPFNTYPRADTDHPSR K L A P R A 2 2 1 0 0 0 0 1 0 0 1 0 0 1 2 0 1 0 1 0 0 0 12 1 1361.7204 O96013 O96013 199 210 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 3 0.0060783 70.889 By MS/MS By matching 1 1 21797000 14450000 7346300 3131 1617 3555 8120;8121 7958 7958 7361 1 LAALALASSENSSSTPEECEEMSEKPK RLKKEKKRLAALALAS EEMSEKPKKKKKQKPQ R L A P K K 4 0 1 0 1 0 6 0 0 0 3 2 1 0 2 6 1 0 0 0 0 0 27 1 2894.3161 O00567 O00567 454 480 NOP56 Nucleolar protein 56 yes yes 3 0.026931 40.396 By MS/MS By matching 1 1 29624000 14836000 14788000 3132 1443 3556 8122;8123 7959 7959 511 2654;2655;2656;2657;2658 1 LAANTLSTPSGSSLQRPKK EMAKGEEKLAANTLST SSLQRPKKSGDMTLIP K L A K K S 2 1 1 0 0 1 0 1 0 0 3 2 0 0 2 4 2 0 0 0 0 0 19 2 1955.08 Q8NFC6 Q8NFC6 1089 1107 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.030993 46.131 By MS/MS 1 0 0 0 3133 2517 3557 8124 7960 7960 1 LAAPSVSHVSPR QTSERANKLAAPSVSH SVSHVSPRKNPSVVIK K L A P R K 2 1 0 0 0 0 0 0 1 0 1 0 0 0 2 3 0 0 0 2 0 0 12 0 1219.6673 Q8WXE1;A0A0U1RRM7;A0A0U1RQW3 Q8WXE1 215 226 ATRIP ATR-interacting protein yes no 2;3 0.00010365 112.94 By MS/MS By MS/MS 2 2 76306000 41524000 34782000 3134 2569 3558 8125;8126;8127;8128 7961;7962;7963;7964;7965 7964 5264;5265 5 LAAQESSEAEDMSVPR PQTRAARRLAAQESSE AEDMSVPRGPIAQWAD R L A P R G 3 1 0 1 0 1 3 0 0 0 1 0 1 0 1 3 0 0 0 1 0 0 16 0 1718.7781 A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1;Q5SRD0 A0A096LPC5 1048 1063 FAM21C;FAM21D WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 yes no 2 0.00016944 96.435 By MS/MS By MS/MS 2 2 39980000 21804000 18176000 3135 183 3559;3560 8129;8130;8131;8132 7966;7967;7968;7969 7966 77 314;315 4 LAAQESSETEDMSVPR PQTRAARRLAAQESSE TEDMSVPRGPIAQWAD R L A P R G 2 1 0 1 0 1 3 0 0 0 1 0 1 0 1 3 1 0 0 1 0 0 16 0 1748.7887 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6 F8W7U3 960 975 FAM21A WASH complex subunit FAM21A yes no 2 1.1984E-16 152.07 By MS/MS By MS/MS 2 3 63259000 21050000 42209000 3136 814 3561;3562;3563 8133;8134;8135;8136;8137 7970;7971;7972;7973 7971 304 1475;1476 4 LAAQLGAPTSPIPDSAIVNTR RALAAERRLAAQLGAP DSAIVNTRRCWSCGAS R L A T R R 4 1 1 1 0 1 0 1 0 2 2 0 0 0 3 2 2 0 0 1 0 0 21 0 2091.1324 B8ZZS4;Q9H8Y5 B8ZZS4 456 476 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 yes no 2;3 0.000167 86.508 By MS/MS By MS/MS 2 2 34805000 17521000 17285000 3137 606 3564 8138;8139;8140;8141 7974;7975;7976;7977 7977 1094;7003 4 LAAVDATVNQVLASR EQTKGKVKLAAVDATV VNQVLASRYGIRGFPT K L A S R Y 4 1 1 1 0 1 0 0 0 0 2 0 0 0 0 1 1 0 0 3 0 0 15 0 1526.8417 Q15084 Q15084 217 231 PDIA6 Protein disulfide-isomerase A6 yes yes 2 0.0015283 96.067 By MS/MS 1 2531000 0 2531000 3138 2128 3565 8142 7978 7978 1 LACLQRTQNAPGQHLACPSK ________________ QHLACPSKSLELRKCE M L A S K S 3 1 1 0 2 3 0 1 1 0 3 1 0 0 2 1 1 0 0 0 0 0 20 1 2249.1157 Q5U5X8 Q5U5X8 2 21 FAM222A Protein FAM222A yes yes 2 0.019119 54.524 By MS/MS 1 9218200 0 9218200 3139 2260 3566 8143 7979 7979 4518 0 LADDYQQKR YRTLERRRLADDYQQK ADDYQQKRWSWGGSAM R L A K R W 1 1 0 2 0 2 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 9 1 1135.5622 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 155 163 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.0073014 58.596 By MS/MS 1 4828800 4828800 0 3140 226 3567 8144 7980 7980 8012 1 LADSGDGAGPSPEEK TRTSARRRLADSGDGA AGPSPEEKDFLKTVEG R L A E K D 2 0 0 2 0 0 2 3 0 0 1 1 0 0 2 2 0 0 0 0 0 0 15 0 1428.6369 Q92917 Q92917 32 46 GPKOW G patch domain and KOW motifs-containing protein yes yes 2 0.00040503 113.14 By MS/MS By matching 1 1 14381000 6053800 8326900 3141 2610 3568 8145;8146 7981 7981 5362 1 LADSGDGAGPSPEEKDFLK TRTSARRRLADSGDGA PEEKDFLKTVEGRELQ R L A L K T 2 0 0 3 0 0 2 3 0 0 2 2 0 1 2 2 0 0 0 0 0 0 19 1 1931.9113 Q92917 Q92917 32 50 GPKOW G patch domain and KOW motifs-containing protein yes yes 2 0.0025591 85.163 By MS/MS 1 5439700 0 5439700 3142 2610 3569 8147 7982 7982 5362 1 LAEAPSPAPTPSPTPVEDLGPQTSTSPGRLSPDFAEELR GTRGPLERLAEAPSPA PDFAEELRSLEPSPSP R L A L R S 4 2 0 2 0 1 4 2 0 0 4 0 0 1 9 5 4 0 0 1 0 0 39 1 4013.9858 A0A0G2JNZ2;Q14160;A0A0G2JMS7;H0YCG0 A0A0G2JNZ2 1536 1574 SCRIB Protein scribble homolog yes no 3;4 5.5315E-13 85.441 By MS/MS By MS/MS 3 3 200330000 95310000 105020000 3143 361 3570;3571 8148;8149;8150;8151;8152;8153 7983;7984;7985;7986;7987;7988;7989 7987 651;652;6937 7 LAEDEGDSEPEAVGQSR KRKKFPDRLAEDEGDS PEAVGQSRGRRQKK__ R L A S R G 2 1 0 2 0 1 4 2 0 0 1 0 0 0 1 2 0 0 0 1 0 0 17 0 1787.781 Q9UIG0 Q9UIG0 1461 1477 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2;3 7.1294E-142 240.34 By MS/MS By MS/MS 2 2 535850000 264740000 271110000 3144 3009 3572 8154;8155;8156;8157 7990;7991;7992;7993;7994;7995;7996 7990 6340 7 LAEEVNDKLQESGQVTISELCK IDENYLDRLAEEVNDK VTISELCKTYDLPGNF R L A C K T 1 0 1 1 1 2 4 1 0 1 3 2 0 0 0 2 1 0 0 2 0 0 22 1 2489.2319 O94874 O94874 123 144 UFL1 E3 UFM1-protein ligase 1 yes yes 3 0.013118 47.018 By MS/MS By matching 1 1 32988000 16415000 16573000 3145 1572 3573 8158;8159 7997 7997 2979 1 LAELEEFINGPNNAHIQQVGDR FALAKTNRLAELEEFI HIQQVGDRCYDEKMYD R L A D R C 2 1 3 1 0 2 3 2 1 2 2 0 0 1 1 0 0 0 0 1 0 0 22 0 2463.2142 J3KS13;A0A087WVQ6;Q00610 J3KS13 120 141 CLTC Clathrin heavy chain;Clathrin heavy chain 1 yes no 3 0.0082582 80.382 By MS/MS By matching 1 1 11041000 6420400 4620500 3146 80 3574 8160;8161 7998 7998 1 LAELPAAAQPSAEDSDTEDDSEAEQTER KEGKYDLKLAELPAAA SEAEQTERNIHPTAMM K L A E R N 6 1 0 4 0 2 6 0 0 0 2 0 0 0 2 3 2 0 0 0 0 0 28 0 2974.2799 O95714 O95714 1928 1955 HERC2 E3 ubiquitin-protein ligase HERC2 yes yes 3 0.0026929 54.855 By MS/MS 1 16210000 16210000 0 3147 1607 3575 8162 7999 7999 3045 1 LAELYVERAK LLNAGESRLAELYVER ELYVERAKWLWSKGDV R L A A K W 2 1 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 1 0 0 10 1 1190.6659 Q13535 Q13535 1952 1961 ATR Serine/threonine-protein kinase ATR yes yes 2 0.014454 66.27 By MS/MS 1 4643800 4643800 0 3148 2062 3576 8163 8000 8000 0 LAERLSPFLAESK RQDRGPPRLAERLSPF SPFLAESKTKNAALQP R L A S K T 2 1 0 0 0 0 2 0 0 0 3 1 0 1 1 2 0 0 0 0 0 0 13 1 1459.8035 H9KVB4;O15417 H9KVB4 258 270 TNRC18 Trinucleotide repeat-containing gene 18 protein yes no 2 0.0019491 110.97 By MS/MS By matching 1 1 15089000 7689400 7399700 3149 1296 3577 8164;8165 8001 8001 2402 1 LAGGQTSQPTTPLTSPQR IRRRRLARLAGGQTSQ TPLTSPQRENPPGPPI R L A Q R E 1 1 0 0 0 3 0 2 0 0 2 0 0 0 3 2 4 0 0 0 0 0 18 0 1838.9486 O95155;B1AQ61 O95155 17 34 UBE4B Ubiquitin conjugation factor E4 B yes no 2 0.0029104 77.505 By MS/MS 1 9517000 9517000 0 3150 1581 3578 8166 8002 8002 2991 1 LAGTQPLEVLEAVQR KFVERTLRLAGTQPLE EVLEAVQRSLVLQRPQ R L A Q R S 2 1 0 0 0 2 2 1 0 0 3 0 0 0 1 0 1 0 0 2 0 0 15 0 1622.8992 P22314;Q5JRR6 P22314 679 693 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 1.3479E-20 155.99 By MS/MS By MS/MS 1 1 11523000 6186000 5336600 3151 1747 3579 8167;8168 8003;8004 8003 2 LAHPEAQGTTQCQRTEHPVISYK FSSLGLWRLAHPEAQG EHPVISYKEIGPWLRE R L A Y K E 2 1 0 0 1 3 2 1 2 1 1 1 0 0 2 1 3 0 1 1 0 0 23 1 2650.2922 Q13591;D6RAF4 Q13591 19 41 SEMA5A Semaphorin-5A yes no 3 0.027043 49.188 By MS/MS 1 0 0 0 3152 2068 3580 8169 8005 8005 1 LAIQGPEDSPSR RRAEGPPRLAIQGPED GPEDSPSRQSRRYDW_ R L A S R Q 1 1 0 1 0 1 1 1 0 1 1 0 0 0 2 2 0 0 0 0 0 0 12 0 1268.6361 Q15773 Q15773 230 241 MLF2 Myeloid leukemia factor 2 yes yes 2 0.00028949 115.83 By MS/MS By MS/MS 1 1 307950000 131940000 176010000 3153 2157 3581 8170;8171 8006;8007 8006 4281 2 LALAGEGEACPLLGSPGAGR LADGAAVRLALAGEGE LGSPGAGRNSVLFLPV R L A G R N 4 1 0 0 1 0 2 5 0 0 4 0 0 0 2 1 0 0 0 0 0 0 20 0 1894.9571 Q96F46 Q96F46 694 713 IL17RA Interleukin-17 receptor A yes yes 2 7.4362E-11 141.83 By MS/MS By MS/MS 1 1 12560000 7229400 5330100 3154 2647 3582 8172;8173 8008;8009;8010 8008 5465 3 LALDGETLGEEEQEDEQPPWASPSPTSR AEAGAEARLALDGETL ASPSPTSRQSPASPPP R L A S R Q 2 1 0 2 0 2 6 2 0 0 3 0 0 0 4 3 2 1 0 0 0 0 28 0 3067.3894 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YCG0 A0A0G2JNZ2 1416 1443 SCRIB Protein scribble homolog yes no 3 8.5792E-10 102.56 By MS/MS By MS/MS 1 1 66277000 36965000 29313000 3155 361 3583 8174;8175 8011;8012;8013 8013 653;6938 3 LALDMEISAYR YEQLLDVKLALDMEIS DMEISAYRKLLEGEEE K L A Y R K 2 1 0 1 0 0 1 0 0 1 2 0 1 0 0 1 0 0 1 0 0 0 11 0 1280.6435 P20700;E9PBF6 P20700 368 378 LMNB1 Lamin-B1 yes no 2 7.7115E-07 143.55 By MS/MS By MS/MS 1 1 7288600 4341700 2946900 3156 1739 3584 8176;8177 8014;8015 8014 652 3275 2 LALDMEISAYRK YEQLLDVKLALDMEIS MEISAYRKLLEGEEER K L A R K L 2 1 0 1 0 0 1 0 0 1 2 1 1 0 0 1 0 0 1 0 0 0 12 1 1408.7384 P20700;E9PBF6 P20700 368 379 LMNB1 Lamin-B1 yes no 2;3 0.0029147 84.169 By MS/MS By MS/MS 2 1 9994900 5831100 4163800 3157 1739 3585 8178;8179;8180 8016;8017;8018 8016 652 3275 3 LALLGLAQPSEKPSSPSPDLPFTTPAPK FSTPPAQRLALLGLAQ PFTTPAPKKPGNPSRA R L A P K K 3 0 0 1 0 1 1 1 0 0 5 2 0 1 7 4 2 0 0 0 0 0 28 1 2858.543 A0A0C4DGU2;Q9Y4U1 A0A0C4DGU2 174 201 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes no 3 1.6125E-05 78.202 By matching By MS/MS 1 1 122610000 77554000 45056000 3158 328 3586 8181;8182 8019 8019 576;577 1 LALSPEDKPIRLSPSK LPADGPERLALSPEDK PIRLSPSKITEPLREG R L A S K I 1 1 0 1 0 0 1 0 0 1 3 2 0 0 3 3 0 0 0 0 0 0 16 2 1749.9989 H9KVB4;O15417 H9KVB4 1124 1139 TNRC18 Trinucleotide repeat-containing gene 18 protein yes no 3 0.031028 49.216 By MS/MS 1 3504500 3504500 0 3159 1296 3587 8183 8020 8020 0 LALSPLSLGK SPRLAAQKLALSPLSL LSPLSLGKENLAESSK K L A G K E 1 0 0 0 0 0 0 1 0 0 4 1 0 0 1 2 0 0 0 0 0 0 10 0 997.61718 P49454 P49454 3116 3125 CENPF Centromere protein F yes yes 2 0.0038274 86.114 By MS/MS By matching 1 1 24037000 14183000 9854600 3160 1854 3588 8184;8185 8021 8021 3564 1 LAPEYEAAATR PWCGHCKRLAPEYEAA EYEAAATRLKGIVPLA R L A T R L 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 11 0 1190.5932 H7BZJ3;P30101 H7BZJ3 39 49 PDIA3 Protein disulfide-isomerase A3 yes no 2 0.018119 76.228 By MS/MS By matching 1 1 8251800 3477700 4774100 3161 1267 3589 8186;8187 8022 8022 1 LAPVPSPEPQKPAPVSPESVK VPVCESQKLAPVPSPE PVSPESVKATLSNPKP K L A V K A 2 0 0 0 0 1 2 0 0 0 1 2 0 0 7 3 0 0 0 3 0 0 21 1 2153.1732 Q96JM3 Q96JM3 199 219 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 2.7663E-05 107.95 By MS/MS By MS/MS 3 3 475200000 251180000 224020000 3162 2674 3590;3591 8188;8189;8190;8191;8192;8193 8023;8024;8025;8026;8027;8028;8029;8030;8031;8032;8033;8034 8028 5522;5523 12 LAQAAQSSVATITR NAAGSQEKLAQAAQSS SSVATITRLADVVKLG K L A T R L 4 1 0 0 0 2 0 0 0 1 1 0 0 0 0 2 2 0 0 1 0 0 14 0 1415.7732 Q9Y490 Q9Y490 2044 2057 TLN1 Talin-1 yes yes 2 0.032356 53.491 By MS/MS By matching 2 1 95819000 63356000 32463000 3163 3117 3592 8194;8195;8196 8035 8035 1 LAQEDVSSRFQSTREQGPGAK L A A K 2 2 0 1 0 3 2 2 0 0 1 1 0 1 1 3 1 0 0 1 0 0 21 2 2290.1302 REV__H3BRD5 yes no 2 0.0049921 68.525 By matching By MS/MS 1 1 129400000 71423000 57972000 + 3164 3170 3593 8197;8198 8036 8036 6764;6765;6766 1 LASDDRPSPPR HTSMDLPKLASDDRPS DDRPSPPRGLVAAYSG K L A P R G 1 2 0 2 0 0 0 0 0 0 1 0 0 0 3 2 0 0 0 0 0 0 11 1 1209.6102 A0A0A0MR66;P98175 A0A0A0MR66 781 791 RBM10 RNA-binding protein 10 yes no 2;3 0.0007037 90.827 By MS/MS By MS/MS 1 2 133320000 31663000 101650000 3165 200 3594 8199;8200;8201 8037;8038;8039;8040 8038 359 4 LASFGGMGTTSSLPSFVGSGNHNPAK PGEFRRPRLASFGGMG SGNHNPAKHQLQNGYQ R L A A K H 2 0 2 0 0 0 0 5 1 0 2 1 1 2 2 5 2 0 0 1 0 0 26 0 2520.2067 Q14678 Q14678 184 209 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 3 0.012599 46.558 By MS/MS By matching 1 1 10421000 4175800 6245600 3166 2100 3595 8202;8203 8041 8041 837 4151 1 LASPELER SPDVGLLKLASPELER LASPELERLIIQSSNG K L A E R L 1 1 0 0 0 0 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 8 0 913.4869 P05412;P17535 P05412 71 78 JUN;JUND Transcription factor AP-1;Transcription factor jun-D no no 2 0.010652 89.679 By MS/MS By MS/MS 1 1 313870000 160940000 152940000 3167 1642;1718 3596 8204;8205 8042;8043;8044;8045 8044 3100 4 LASPMKPVPGTPPSSK RPPGGSDKLASPMKPV PGTPPSSKAKSPISSG K L A S K A 1 0 0 0 0 0 0 1 0 0 1 2 1 0 5 3 1 0 0 1 0 0 16 1 1592.8596 Q15648 Q15648 1205 1220 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 3 0.0052575 77.222 By matching By MS/MS 1 1 11380000 6030300 5349200 3168 2148 3597 8206;8207 8046 8046 863 7603 0 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR GPGAEGPRLASPSGST DDSATICRVCQKPGDL R L A C R V 4 1 0 2 1 0 2 7 0 1 3 0 0 0 4 7 4 0 0 2 0 0 38 0 3557.6791 Q13263;M0R0K9 Q13263 592 629 TRIM28 Transcription intermediary factor 1-beta yes no 3;4 2.216E-17 89.7 By MS/MS By MS/MS 2 2 637470000 290860000 346610000 3169 2054 3598 8208;8209;8210;8211 8047;8048;8049;8050;8051;8052 8047 4032;4033 6 LASTSDIEEK VAPTIPRRLASTSDIE STSDIEEKENRDSSSL R L A E K E 1 0 0 1 0 0 2 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 10 0 1091.5346 O14974;F8VZN8;H0YIS4;H0YHI8 O14974 505 514 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.00036949 115 By matching By MS/MS 1 1 18259000 10256000 8002500 3170 1463 3599 8212;8213 8053 8053 2721 1 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK VIAQGIGKLASVPAGG APAAAEEKKDEKKEES K L A E K K 14 0 0 0 0 0 2 4 0 0 1 1 0 0 4 4 0 0 0 3 0 0 33 0 2773.4246 P05387;H0YDD8 P05387 62 94 RPLP2 60S acidic ribosomal protein P2 yes no 3 7.5783E-07 75.438 By MS/MS By matching 1 1 35155000 16321000 18835000 3171 1641 3600 8214;8215 8054 8054 3095 1 LATKLSSSLGR ALTGGPKRLATKLSSS KLSSSLGRSSGRRVRA R L A G R S 1 1 0 0 0 0 0 1 0 0 3 1 0 0 0 3 1 0 0 0 0 0 11 1 1131.6612 Q9BST9 Q9BST9 213 223 RTKN Rhotekin yes yes 2 0.013163 104.9 By MS/MS By matching 1 1 21393000 9924800 11468000 3172 2746 3601 8216;8217 8055 8055 5703;5704 1 LATKSSPVKVGEK SAMKVGEKLATKSSPV SPVKVGEKRKAADETL K L A E K R 1 0 0 0 0 0 1 1 0 0 1 3 0 0 1 2 1 0 0 2 0 0 13 2 1342.782 P49916 P49916 908 920 LIG3 DNA ligase 3 yes yes 3 0.022204 65.234 By matching By MS/MS 1 1 13334000 7632800 5700900 3173 1865 3602 8218;8219 8056 8056 3621 1 LATNTSAPDLK STTPRLSRLATNTSAP NTSAPDLKNVRSKVGS R L A L K N 2 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1129.5979 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4;B5MEG9 E7EVA0 2068 2078 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 1.2952E-06 145.14 By MS/MS By MS/MS 1 1 103830000 52534000 51294000 3174 828 3603 8220;8221 8057;8058 8058 1538 2 LATQLTGPVMPVR DSSAEELKLATQLTGP TGPVMPVRNVYKKEKA K L A V R N 1 1 0 0 0 1 0 1 0 0 2 0 1 0 2 0 2 0 0 2 0 0 13 0 1381.7752 P26373 P26373 146 158 RPL13 60S ribosomal protein L13 yes yes 2 0.023415 78.342 By MS/MS By matching 2 1 11676000 6182300 5494100 3175 1767 3604;3605 8222;8223;8224 8059;8060 8060 670 1 LAVEALSSLDGDLAGR GERRAIEKLAVEALSS LDGDLAGRYYALKSMT K L A G R Y 3 1 0 2 0 0 1 2 0 0 4 0 0 0 0 2 0 0 0 1 0 0 16 0 1585.8312 P12277;G3V4N7 P12277 157 172 CKB Creatine kinase B-type yes no 2 1.3945E-06 130.44 By MS/MS By MS/MS 1 1 16212000 7219500 8992500 3176 1687 3606 8225;8226 8061;8062 8061 2 LAVLSSSLTHWK RARQYSTRLAVLSSSL SSSLTHWKKLPPLPSL R L A W K K 1 0 0 0 0 0 0 0 1 0 3 1 0 0 0 3 1 1 0 1 0 0 12 0 1340.7452 F5GX19;F5H3Y3;Q6IAA8 F5GX19 92 103 LAMTOR1 Ragulator complex protein LAMTOR1 yes no 2 8.1856E-11 145.81 By MS/MS By MS/MS 1 1 41346000 26355000 14991000 3177 943 3607 8227;8228 8063;8064 8063 1771 2 LAVNMVPFPR QLNADLRKLAVNMVPF VNMVPFPRLHFFMPGF K L A P R L 1 1 1 0 0 0 0 0 0 0 1 0 1 1 2 0 0 0 0 2 0 0 10 0 1142.627 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A0B4J269;Q13509;K7ESM5;A0A075B736;Q5SQY0;A6NNZ2;Q9BUF5;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;P04350;Q3ZCM7 Q5JP53 235 244 TUBB;TUBB2B;TUBB2A;TUBB3;TUBB6;TUBB8;TUBB1;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-6 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain no no 2 0.0014343 113.5 By MS/MS By MS/MS 3 3 21354000 11770000 9583800 3178 1653;1958 3608;3609 8229;8230;8231;8232;8233;8234 8065;8066;8067;8068;8069 8068 607 5 LAWVGDVFTATPAEPRPLTSPLR GTPPVDPKLAWVGDVF RPLTSPLRQAADEDDK K L A L R Q 3 2 0 1 0 0 1 1 0 0 3 0 0 1 4 1 3 1 0 2 0 0 23 1 2493.338 P48634 P48634 789 811 PRRC2A Protein PRRC2A yes yes 3 5.2647E-05 110.74 By MS/MS By MS/MS 1 1 73653000 45793000 27860000 3179 1846 3610 8235;8236 8070;8071 8071 3543;7460 2 LAYINPDLALEEK KILKEQERLAYINPDL PDLALEEKNKGNECFQ R L A E K N 2 0 1 1 0 0 2 0 0 1 3 1 0 0 1 0 0 0 1 0 0 0 13 0 1487.7872 P31948 P31948 352 364 STIP1 Stress-induced-phosphoprotein 1 yes yes 2 0.015512 77.288 By matching By MS/MS 1 1 8643400 3422800 5220600 3180 1787 3611 8237;8238 8072 8072 1 LCDDGPQLPTSPR VSREPRLRLCDDGPQL PQLPTSPRLTAAARSA R L C P R L 0 1 0 2 1 1 0 1 0 0 2 0 0 0 3 1 1 0 0 0 0 0 13 0 1454.6824 H0YAZ3;O60504;H0YB51 H0YAZ3 32 44 SORBS3 Vinexin yes no 2 1.9636E-14 155.37 By MS/MS By MS/MS 1 1 105150000 51404000 53747000 3181 1160 3612 8239;8240 8073;8074;8075 8073 2203 3 LCDFGSASHVADNDITPYLVSR NESKTILKLCDFGSAS ITPYLVSRFYRAPEII K L C S R F 2 1 1 3 1 0 0 1 1 1 2 0 0 1 1 3 1 0 1 2 0 0 22 0 2436.138 Q13523;H0YDJ3 Q13523 832 853 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 2;3 4.9266E-47 173.03 By MS/MS By MS/MS 3 3 767220000 423750000 343470000 3182 2061 3613;3614 8241;8242;8243;8244;8245;8246 8076;8077;8078;8079;8080 8078 103 4066;8330 5 LCDFGVSGQLIDSMANSFVGTR VNSRGEIKLCDFGVSG ANSFVGTRSYMAPERL K L C T R S 1 1 1 2 1 1 0 3 0 1 2 0 1 2 0 3 1 0 0 2 0 0 22 0 2373.1093 G5E9C7;P36507;H3BRW9;A0A1B0GUL7;Q02750 G5E9C7 113 134 MAP2K2;MAP2K1 Dual specificity mitogen-activated protein kinase kinase 2;Dual specificity mitogen-activated protein kinase kinase 1 yes no 3 0.010631 49.959 By MS/MS By matching 1 1 13193000 5940200 7253100 3183 1098 3615 8247;8248 8081 8081 393 2074 1 LCSSSSSDTSSR LRKAKRARLCSSSSSD SSSDTSSRSFFDPTSQ R L C S R S 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 7 1 0 0 0 0 0 12 0 1272.5252 C9J0I9;Q86WB0 C9J0I9 362 373 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.013054 70.628 By MS/MS By matching 1 1 8949800 5001000 3948900 3184 624 3616 8249;8250 8082 8082 1149;1150;1151;1152;1153 1 LCYVALDFEQEMATAASSSSLEK IVRDIKEKLCYVALDF ASSSSLEKSYELPDGQ K L C E K S 4 0 0 1 1 1 3 0 0 0 3 1 1 1 0 4 1 0 1 1 0 0 23 0 2549.1666 P63261;P60709;I3L4N8;Q6S8J3 P63261 216 238 ACTG1;ACTB;POTEE Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E yes no 2;3 1.2101E-105 172.57 By MS/MS By MS/MS 3 3 170180000 119310000 50875000 3185 1928 3617;3618 8251;8252;8253;8254;8255;8256 8083;8084;8085;8086;8087;8088 8085 754 6 LDAQSLNLSQEDFDRYMSGQTSPR CAVAFIEKLDAQSLNL MSGQTSPRKQEAESWS K L D P R K 1 2 1 3 0 3 1 1 0 0 3 0 1 1 1 4 1 0 1 0 0 0 24 1 2757.2664 A0A0A0MSJ3;Q3HKR1;E9PFK9;Q9UJ41 A0A0A0MSJ3 177 200 RABGEF1 Rab5 GDP/GTP exchange factor yes no 3 5.1073E-06 105.46 By MS/MS By MS/MS 1 1 17408000 10100000 7307500 3186 250 3619 8257;8258 8089;8090;8091 8090 433;6904 3 LDDGHLNNSLSSPVQADVYFPR ADSDAVVKLDDGHLNN QADVYFPRLIVPFCGH K L D P R L 1 1 2 3 0 1 0 1 1 0 3 0 0 1 2 3 0 0 1 2 0 0 22 0 2443.1768 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 14 35 LGALSL Galectin;Galectin-related protein yes no 2;3 0.0003133 76.439 By MS/MS By MS/MS 2 2 95285000 48946000 46339000 3187 610 3620 8259;8260;8261;8262 8092;8093 8092 1098;1099 2 LDEGTPPEPK AIAEAMSKLDEGTPPE EGTPPEPKGTFVDYQT K L D P K G 0 0 0 1 0 0 2 1 0 0 1 1 0 0 3 0 1 0 0 0 0 0 10 0 1081.5292 H0YN01;H0YMT1;A0A1C7CYV7;A0A1B0GVU7;Q9Y4G6 H0YN01 232 241 TLN2 Talin-2 yes no 2 5.9687E-06 106.67 By MS/MS By MS/MS 1 1 18189000 8214400 9974200 3188 430 3621 8263;8264 8094;8095 8095 6957 1 LDELRDEGKASSAK KAACLLPKLDELRDEG EGKASSAKQRLKCASL K L D A K Q 2 1 0 2 0 0 2 1 0 0 2 2 0 0 0 2 0 0 0 0 0 0 14 2 1517.7686 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5 B7WNR0 91 104 ALB Serum albumin yes no 4 0.0056337 60.901 By matching By MS/MS 1 1 9254600 4389300 4865300 + 3189 314 3622 8265;8266 8096 8096 1 LDFIESDSPCSSEALSK HNFLLEQKLDFIESDS CSSEALSKKELSAEEL K L D S K K 1 0 0 2 1 0 2 0 0 1 2 1 0 1 1 5 0 0 0 0 0 0 17 0 1883.8459 A0A0A0MSA7;O43432;A0A0U1RQK7 A0A0A0MSA7 1438 1454 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 2 0.00061247 95.428 By MS/MS By MS/MS 1 1 12970000 6604700 6365300 3190 243 3623 8267;8268 8097;8098;8099 8098 427;428 3 LDFLPEMMVDHCSLNSSPVSK ________________ LNSSPVSKKMNGTLDH K L D S K K 0 0 1 2 1 0 1 0 1 0 3 1 2 1 2 4 0 0 0 2 0 0 21 0 2405.1065 F5H3J7;F5H0D8;E9PKU1;G5EA30 F5H3J7 6 26 CELF1 yes no 3 0.00086629 71.872 By matching By MS/MS 2 2 89022000 48947000 40075000 3191 897 3624;3625 8269;8270;8271;8272 8100;8101 8100 336;337 1677 2 LDGENIYIR MRKKKRERLDGENIYI DGENIYIRHSNLMLED R L D I R H 0 1 1 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 9 0 1091.5611 P11171;Q4VB86 P11171 654 662 EPB41 Protein 4.1 yes no 2 0.0010529 148.99 By MS/MS By MS/MS 1 1 170250000 91764000 78490000 3192 1681 3626 8273;8274 8102;8103 8102 8226 2 LDGFPEEFSISSNIIQFKYFIK IVLVSKSRLDGFPEEF IQFKYFIKSENGTRLV R L D I K S 0 0 1 1 0 1 2 1 0 4 1 2 0 4 1 3 0 0 1 0 0 0 22 1 2621.3417 Q8WVF5 Q8WVF5 180 201 KCTD4 BTB/POZ domain-containing protein KCTD4 yes yes 3 0.0082746 51.684 By MS/MS 1 25986000 0 25986000 3193 2560 3627 8275 8104 8104 5232;5233;5234 1 LDGLVETPTGYIESLPR ILAALQERLDGLVETP GYIESLPRVVKRRVNA R L D P R V 0 1 0 1 0 0 2 2 0 1 3 0 0 0 2 1 2 0 1 1 0 0 17 0 1858.9676 F8W020;F8VXI6;F8VUX1;F8VY35;F8W0J6;F5H4R6;H0YIV4;P55209;F8VRJ2;H0YHC3;F8W118;F8VV59;B7Z9C2 F8W020 56 72 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 2 1.5728E-90 213.02 By MS/MS By MS/MS 2 2 154220000 95470000 58747000 3194 972 3628 8276;8277;8278;8279 8105;8106;8107 8107 7137;7138 2 LDIDSPPITAR TFLEHMCRLDIDSPPI DSPPITARNTGIICTI R L D A R N 1 1 0 2 0 0 0 0 0 2 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1196.6401 P14618;B4DNK4;H3BTN5;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13;H3BN34;H3BQZ3 P14618 33 43 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 2 0.0021218 91.307 By MS/MS By MS/MS 1 1 67379000 39440000 27939000 3195 1700 3629 8280;8281 8108;8109 8109 3201 2 LDIPTGTTPQRK CFLEQDLKLDIPTGTT TGTTPQRKSYLYPSTL K L D R K S 0 1 0 1 0 1 0 1 0 1 1 1 0 0 2 0 3 0 0 0 0 0 12 1 1325.7303 P52732 P52732 919 930 KIF11 Kinesin-like protein KIF11 yes yes 3 2.6216E-09 138.31 By MS/MS By MS/MS 1 1 24288000 14193000 10095000 3196 1889 3630 8282;8283 8110;8111 8110 7485 2 LDNVPHTPSSYIETLPK VLAALQERLDNVPHTP SYIETLPKAVKRRINA R L D P K A 0 0 1 1 0 0 1 0 1 1 2 1 0 0 3 2 2 0 1 1 0 0 17 0 1909.9785 E9PNJ7;A8MXH2;C9J6D1;Q99733;E9PS34;E9PKI2;E9PNW0;E9PJJ2;E9PP22 E9PNJ7 45 61 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 3 0.011605 56.766 By MS/MS By matching 1 1 13641000 8415800 5225100 3197 502 3631 8284;8285 8112 8112 6968 1 LDQGNLHTSVSSAQGQDAAQSEEK SRETVILRLDQGNLHT DAAQSEEKRGITAREL R L D E K R 3 0 1 2 0 4 2 2 1 0 2 1 0 0 0 4 1 0 0 1 0 0 24 0 2499.1474 Q9UBG3 Q9UBG3 455 478 CRNN Cornulin yes yes 3 0.015758 43.732 By MS/MS 1 11336000 11336000 0 3198 2989 3632 8286 8113 8113 6289;6290 1 LDQLQYDVR LVGGEGTRLDQLQYDV DQLQYDVRKGSVVNVN R L D V R K 0 1 0 2 0 2 0 0 0 0 2 0 0 0 0 0 0 0 1 1 0 0 9 0 1148.5826 Q8N4C8 Q8N4C8 982 990 MINK1 Misshapen-like kinase 1 yes yes 2 0.013767 72.325 By MS/MS 1 1818400 1818400 0 3199 2471 3633 8287 8114 8114 8396 0 LDQPVSAPPSPR EKRILQEKLDQPVSAP VSAPPSPRDISMEIDS K L D P R D 1 1 0 1 0 1 0 0 0 0 1 0 0 0 4 2 0 0 0 1 0 0 12 0 1262.6619 Q16204 Q16204 235 246 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2;3 0.00043794 106.76 By MS/MS By MS/MS 2 3 329780000 166800000 162990000 3200 2161 3634;3635 8288;8289;8290;8291;8292 8115;8116;8117;8118;8119;8120;8121;8122;8123 8122 4286;4287 9 LDQTTMNVIK FGLQVTGKLDQTTMNV QTTMNVIKKPRCGVPD K L D I K K 0 0 1 1 0 1 0 0 0 1 1 1 1 0 0 0 2 0 0 1 0 0 10 0 1161.6064 O60882 O60882 87 96 MMP20 Matrix metalloproteinase-20 yes yes 2 0.030704 56.729 By matching By MS/MS 1 1 6062900 2613800 3449100 3201 1532 3636 8293;8294 8124 8124 556 0 LDSLPEHEDSEK SYRECLGRLDSLPEHE PEHEDSEKAEMKRSTE R L D E K A 0 0 0 2 0 0 3 0 1 0 2 1 0 0 1 2 0 0 0 0 0 0 12 0 1397.6311 Q8TDY2 Q8TDY2 220 231 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 2 0.023782 63.091 By MS/MS By matching 1 1 13436000 6599500 6836900 3202 2541 3637 8295;8296 8125 8125 5186 1 LDSPEELEPDR TNHFSQSKLDSPEELE PEELEPDREEDSSSCI K L D D R E 0 1 0 2 0 0 3 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 11 0 1298.599 Q9NS91;H7C0A5;H7C3I2 Q9NS91 407 417 RAD18 E3 ubiquitin-protein ligase RAD18 yes no 2 0.0021223 91.093 By MS/MS By MS/MS 1 1 18115000 9133700 8981400 3203 2913 3638 8297;8298 8126;8127 8126 6145 2 LDSPPPSPITEASEAAEAAEAGNLAVSSR PSGLGVWRLDSPPPSP GNLAVSSREEGVSQQG R L D S R E 7 1 1 1 0 0 4 1 0 1 2 0 0 0 4 5 1 0 0 1 0 0 29 0 2836.3727 Q9C0C2 Q9C0C2 492 520 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 0.0010792 69.857 By matching By MS/MS 1 1 18424000 8942800 9481300 3204 2791 3639 8299;8300 8128 8128 5820;5821 1 LDSQPQETSPELPR HVTEGIPRLDSQPQET ETSPELPRRRVRHQGD R L D P R R 0 1 0 1 0 2 2 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 14 0 1595.7791 O14545 O14545 407 420 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2;3 2.0642E-111 233.28 By MS/MS By MS/MS 4 3 491770000 262330000 229440000 3205 1449 3640;3641;3642 8301;8302;8303;8304;8305;8306;8307 8129;8130;8131;8132;8133;8134;8135;8136;8137 8133 2672;2673;7286 9 LDSSEMDHSENEDYTMSSPLPGKK SPGRIKGRLDSSEMDH SSPLPGKKSDKRDDSD R L D K K S 0 0 1 3 0 0 3 1 1 0 2 2 2 0 2 5 1 0 1 0 0 0 24 1 2696.1582 Q9NTI5;A9IYQ1 Q9NTI5 1174 1197 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 3.3435E-06 88.768 By MS/MS By MS/MS 1 1 20005000 11059000 8946200 3206 2918 3643 8308;8309 8138;8139 8138 1156;1157 6162 2 LDSSPSVSSTLAAK QASKATPKLDSSPSVS VSSTLAAKDDPDGKQE K L D A K D 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 1 0 0 14 0 1361.7038 J3KQ96;E7ETY2;Q13428 J3KQ96 1187 1200 TCOF1 Treacle protein no no 2 3.6108E-06 125.73 By MS/MS By MS/MS 1 1 288040000 161010000 127030000 3207 822;2059 3644 8310;8311 8140;8141;8142;8143;8144 8140 1504;1505 5 LDSSPSVSSTLAAKDDPDGK QASKATPKLDSSPSVS AKDDPDGKQEAKPQQA K L D G K Q 2 0 0 4 0 0 0 1 0 0 2 2 0 0 2 5 1 0 0 1 0 0 20 1 1988.9538 J3KQ96;E7ETY2;Q13428 J3KQ96 1187 1206 TCOF1 Treacle protein no no 2;3 3.1169E-05 102.79 By MS/MS By MS/MS 1 2 60215000 15836000 44379000 3208 822;2059 3645 8312;8313;8314 8145;8146;8147 8146 1504;1505 3 LDSSPVSSPR FGPNKMMRLDSSPVSS SSPVSSPRKHSAELIA R L D P R K 0 1 0 1 0 0 0 0 0 0 1 0 0 0 2 4 0 0 0 1 0 0 10 0 1043.5247 O60293 O60293 946 955 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 0.018047 66.692 By MS/MS 1 3721500 0 3721500 3209 1515 3646 8315 8148 8148 2859;2860 0 LDTPDINIVLK TSPLGNARLDTPDINI PDINIVLKQDMATEHP R L D L K Q 0 0 1 2 0 0 0 0 0 2 2 1 0 0 1 0 1 0 0 1 0 0 11 0 1239.7075 A0A087WYW3;P30414 A0A087WYW3 853 863 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.0051713 94.023 By MS/MS By MS/MS 1 1 7550900 4036500 3514300 3210 130 3647 8316;8317 8149;8150 8150 6859 2 LDYCGGSGEPGGVQR RKLRAMCRLDYCGGSG GEPGGVQRAFSASSAS R L D Q R A 0 1 0 1 1 1 1 5 0 0 1 0 0 0 1 1 0 0 1 1 0 0 15 0 1550.6784 Q15464 Q15464 112 126 SHB SH2 domain-containing adapter protein B yes yes 2 7.7089E-09 112.94 By matching By MS/MS 1 1 25992000 14001000 11991000 3211 2142 3648 8318;8319 8151 8151 8353 0 LEASYSDSPPGEEDLLVHVAEGSK QFDTEYQRLEASYSDS VHVAEGSKSPWHHIEN R L E S K S 2 0 0 2 0 0 4 2 1 0 3 1 0 0 2 4 0 0 1 2 0 0 24 0 2528.1918 Q7Z3C6;C9JS65;C9JFV2;F2Z3I6;C9JX27;C9IYZ9;C9JKV7;C9JDK4;C9JXG2 Q7Z3C6 11 34 ATG9A Autophagy-related protein 9A yes no 3 0.026588 54.675 By MS/MS 1 0 0 0 3212 2376 3649 8320 8152 8152 4825 1 LECEQSRLLLRAK L E A K 1 2 0 0 1 1 2 0 0 0 4 1 0 0 0 1 0 0 0 0 0 0 13 2 1614.8876 REV__A0A087WTS8 yes no 2 0.0060977 84.365 By MS/MS By matching 1 1 7029900 3402100 3627700 + 3213 3161 3650 8321;8322 8153 8153 6760 0 LEDTENWLYEDGEDQPK DRNSFTLKLEDTENWL EDGEDQPKQVYVDKLA K L E P K Q 0 0 1 3 0 1 4 1 0 0 2 1 0 0 1 0 1 1 1 0 0 0 17 0 2079.8909 A0A087WYC1;P34932 A0A087WYC1 650 666 HSPA4 Heat shock 70 kDa protein 4 yes no 3 0.027747 45.618 By MS/MS 1 0 0 0 3214 120 3651 8323 8154 8154 1 LEEEALYAAQR ALQEEKLRLEEEALYA EALYAAQREAARAAKQ R L E Q R E 3 1 0 0 0 1 3 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 11 0 1291.6408 Q63HQ0 Q63HQ0 104 114 AP1AR AP-1 complex-associated regulatory protein yes yes 2 0.0036892 93.178 By MS/MS By matching 1 1 6286800 2899700 3387100 3215 2285 3652 8324;8325 8155 8155 8373 1 LEEFSPR QEVHGSSRLEEFSPRQ RLEEFSPRQAQMFQNF R L E P R Q 0 1 0 0 0 0 2 0 0 0 1 0 0 1 1 1 0 0 0 0 0 0 7 0 876.43413 Q9UGU0;I3L1M7 Q9UGU0 27 33 TCF20 Transcription factor 20 yes no 2 0.020341 106.6 By matching By MS/MS 1 1 11071000 6167100 4904300 3216 3001 3653 8326;8327 8156 8156 6311 1 LEEGVASDEEAEEAQPGSGPSPEPEGSPPAHPQ RTVRQVFRLEEGVASD GSPPAHPQ________ R L E P Q - 4 0 0 1 0 2 8 4 1 0 1 0 0 0 7 4 0 0 0 1 0 0 33 0 3310.4386 A1L2Z2;Q7Z406 A1L2Z2 606 638 MYH14 Myosin-14 yes no 3 8.9239E-05 61.45 By MS/MS 1 11332000 0 11332000 3217 444 3654 8328 8157 8157 827 1 LEEPPELNRQSPNPR LVPNGFSKLEEPPELN NRQSPNPRRGHAVPPT K L E P R R 0 2 2 0 0 1 3 0 0 0 2 0 0 0 4 1 0 0 0 0 0 0 15 1 1774.8962 Q7Z5L9 Q7Z5L9 165 179 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2;3 0.003431 83.292 By MS/MS By MS/MS 2 2 941520000 305270000 636250000 3218 2391 3655 8329;8330;8331;8332 8158;8159;8160 8160 4867 3 LEETKEYQEPEVPESNQK TESSLLAKLEETKEYQ EVPESNQKQWQSKRKS K L E Q K Q 0 0 1 0 0 2 6 0 0 0 1 2 0 0 2 1 1 0 1 1 0 0 18 1 2176.0172 P33981 P33981 368 385 TTK Dual specificity protein kinase TTK yes yes 3 0.0012908 87.157 By MS/MS By MS/MS 1 1 7725300 4590900 3134400 3219 1789 3656 8333;8334 8161;8162 8162 7429;8254 2 LEGDSDDLLEDSDSEEHSR SSCSDIPKLEGDSDDL SDSEEHSRSDSVTGHT K L E S R S 0 1 0 5 0 0 4 1 1 0 3 0 0 0 0 4 0 0 0 0 0 0 19 0 2146.8774 Q9NR09 Q9NR09 469 487 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 3 0.00010799 108.99 By MS/MS By MS/MS 1 1 12201000 6115800 6085500 3220 2903 3657 8335;8336 8163;8164 8163 6115 2 LEGPQAQSEESVEPEADVKPLFLSR PKEEPEPRLEGPQAQS VKPLFLSRAALTGLAD R L E S R A 2 1 0 1 0 2 5 1 0 0 3 1 0 1 3 3 0 0 0 2 0 0 25 1 2754.3712 Q9P225 Q9P225 59 83 DNAH2 Dynein heavy chain 2, axonemal yes yes 3 0.025118 41.482 By MS/MS By matching 1 1 14877000 6735700 8141200 3221 2970 3658 8337;8338 8165 8165 6256;6257 1 LEGPVSPDVEPGKEETEESK EHMECEIKLEGPVSPD KEETEESKKRKRKPYR K L E S K K 0 0 0 1 0 0 6 2 0 0 1 2 0 0 3 2 1 0 0 2 0 0 20 1 2155.0168 O14686 O14686 1666 1685 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2;3 0.0028743 65.16 By MS/MS By MS/MS 1 2 61923000 20679000 41244000 3222 1454 3659 8339;8340;8341 8166;8167;8168 8168 2701 3 LEGQGDVPTPK PEAVRWEKLEGQGDVP QGDVPTPKQFVADVKN K L E P K Q 0 0 0 1 0 1 1 2 0 0 1 1 0 0 2 0 1 0 0 1 0 0 11 0 1139.5823 Q9Y2Z0 Q9Y2Z0 257 267 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 0.029126 79.974 By MS/MS 1 0 0 0 3223 3100 3660 8342 8169 8169 7944 1 LEGVDGGQSPR ADEDLIFRLEGVDGGQ VDGGQSPRAGHDGDSD R L E P R A 0 1 0 1 0 1 1 3 0 0 1 0 0 0 1 1 0 0 0 1 0 0 11 0 1113.5415 H3BRH4;O00418 H3BRH4 10 20 EEF2K Eukaryotic elongation factor 2 kinase yes no 2 0.0021088 97.69 By MS/MS By MS/MS 1 1 21510000 12056000 9454200 3224 1248 3661 8343;8344 8170;8171 8170 2328 2 LEKPETQSSPITVQSSK VDIPKKPRLEKPETQS PITVQSSKDLPMADLS R L E S K D 0 0 0 0 0 2 2 0 0 1 1 2 0 0 2 4 2 0 0 1 0 0 17 1 1857.9684 E9PGI3;A0A087WXN4;Q96CB8 E9PGI3 120 136 INTS12 Integrator complex subunit 12 yes no 2 0.00067888 110.55 By matching By MS/MS 1 1 20082000 11273000 8808900 3225 111 3662 8345;8346 8172 8172 193 1 LELQGPR EIEGRAIRLELQGPRG RLELQGPRGSPNARSQ R L E P R G 0 1 0 0 0 1 1 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 7 0 811.4552 P19338;H7BY16 P19338 555 561 NCL Nucleolin yes no 2 0.030699 111.69 By MS/MS By matching 1 1 10731000 5260600 5469900 3226 1732 3663 8347;8348 8173 8173 1 LELSSSASPQEER GQTPSSSRLELSSSAS SASPQEERTVGVAFNQ R L E E R T 1 1 0 0 0 1 3 0 0 0 2 0 0 0 1 4 0 0 0 0 0 0 13 0 1431.6842 A0A075B6T1;Q9C0C7 A0A075B6T1 542 554 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 yes no 2 0.0013459 108.71 By MS/MS 1 5215400 0 5215400 3227 14 3664 8349 8174 8174 25 1 LENEGSDEDIETDVLYSPQMALK STVSIQIKLENEGSDE YSPQMALKLALTEWLQ K L E L K L 1 0 1 3 0 1 4 1 0 1 3 1 1 0 1 2 1 0 1 1 0 0 23 0 2595.1898 O60502 O60502 359 381 MGEA5 Protein O-GlcNAcase yes yes 2;3 0.00037268 73.753 By MS/MS By MS/MS 1 3 34755000 7652700 27103000 3228 1519 3665;3666 8350;8351;8352;8353 8175;8176;8177;8178;8179 8178 550 2869 4 LENMSPRQVVERSATAAAAATGQK TENGDKARLENMSPRQ AAAATGQKNLLNGKGV R L E Q K N 6 2 1 0 0 2 2 1 0 0 1 1 1 0 1 2 2 0 0 2 0 0 24 2 2485.2707 A0A1B0GWG1;A0A1B0GTX7;E9PEZ5;A0A1B0GUL6;Q9UPP5 A0A1B0GWG1 137 160 KIAA1107 Uncharacterized protein KIAA1107 yes no 2 0.010464 46.324 By MS/MS 1 3364200 0 3364200 3229 416 3667 8354 8180 8180 164 776;777;6951 1 LENVSQLSLDK FYQHNVEKLENVSQLS VSQLSLDKSPTEKSTQ K L E D K S 0 0 1 1 0 1 1 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 11 0 1244.6612 Q86W56 Q86W56 126 136 PARG Poly(ADP-ribose) glycohydrolase yes yes 2 0.0080027 70.256 By MS/MS 1 0 0 0 3230 2410 3668 8355 8181 8181 1 LENVSQLSLDKSPTEK FYQHNVEKLENVSQLS LDKSPTEKSTQYLNQH K L E E K S 0 0 1 1 0 1 2 0 0 0 3 2 0 0 1 3 1 0 0 1 0 0 16 1 1786.9313 Q86W56 Q86W56 126 141 PARG Poly(ADP-ribose) glycohydrolase yes yes 2 0.00065781 108.96 By MS/MS 1 12821000 12821000 0 3231 2410 3669 8356 8182 8182 4913 1 LEPNSPMHGGTLLEDVVGGR SSSEANFKLEPNSPMH LEDVVGGRQTTPESDF K L E G R Q 0 1 1 1 0 0 2 4 1 0 3 0 1 0 2 1 1 0 0 2 0 0 20 0 2077.0262 Q5VY60;Q7Z4H7 Q5VY60 665 684 HAUS6 HAUS augmin-like complex subunit 6 yes no 3 0.00019536 88.283 By MS/MS By MS/MS 1 1 33614000 17468000 16146000 3232 2280 3670 8357;8358 8183;8184 8183 914 4580 1 LEPQELSPLSATVFPK AFQGLEPKLEPQELSP LSATVFPKVEHSPGPP K L E P K V 1 0 0 0 0 1 2 0 0 0 3 1 0 1 3 2 1 0 0 1 0 0 16 0 1754.9455 A0A087WUE6;Q3T8J9;Q9H869 A0A087WUE6 1249 1264 GON4L;YY1AP1 GON-4-like protein;YY1-associated protein 1 yes no 2 8.9109E-16 149.97 By matching By MS/MS 1 1 17334000 9161100 8172700 3233 54 3671 8359;8360 8185 8185 95 1 LEPSTSTDQPVTPEPTSQATR TLVPTAPKLEPSTSTD EPTSQATRGRTNRSSV K L E T R G 1 1 0 1 0 2 2 0 0 0 1 0 0 0 4 3 5 0 0 1 0 0 21 0 2241.0761 Q14676 Q14676 1414 1434 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.027335 45.017 By MS/MS By matching 1 1 21263000 10520000 10743000 3234 2098 3672 8361;8362 8186 8186 1 LEPTNVQTVTCSPR AKNSSDAKLEPTNVQT QTVTCSPRVKALPLSP K L E P R V 0 1 1 0 1 1 1 0 0 0 1 0 0 0 2 1 3 0 0 2 0 0 14 0 1600.7879 J3KTI7;J3QR52;J3QLN7;Q99741 J3KTI7 34 47 CDC6 Cell division control protein 6 homolog yes no 2 5.0746E-21 160.79 By MS/MS 1 9992200 9992200 0 3235 1344 3673 8363 8187 8187 2484 1 LEPVSPPSPPHTDPELELVPPR KDRSLTGKLEPVSPPS ELELVPPRLSKEELIQ K L E P R L 0 1 0 1 0 0 3 0 1 0 3 0 0 0 8 2 1 0 0 2 0 0 22 0 2402.2482 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9JQE8;H7C1Y3;H0YGK8;C9J330 C9JE98 145 166 NCOR2 Nuclear receptor corepressor 2 yes no 3 0.0026402 70.114 By MS/MS By MS/MS 1 1 19005000 0 19005000 3236 625 3674 8364;8365 8188;8189 8188 1167;1168 1 LEQGQAIDDLMPAQK LLIEMEQRLEQGQAID DDLMPAQK________ R L E Q K - 2 0 0 2 0 3 1 1 0 1 2 1 1 0 1 0 0 0 0 0 0 0 15 0 1655.8189 P12277;H0YJG0 P12277 367 381 CKB Creatine kinase B-type yes no 2 0.0020766 85.536 By matching By MS/MS 1 1 9888200 4862800 5025500 3237 1687 3675 8366;8367 8190 8190 0 LEQNGSPLGR GPPAKIARLEQNGSPL QNGSPLGRGRLGSTGA R L E G R G 0 1 1 0 0 1 1 2 0 0 2 0 0 0 1 1 0 0 0 0 0 0 10 0 1069.5516 C9J3I0;H0YN86;C9JLL5;C9J7F3;C9JGL9;C9IZC5;C9JP21;Q01826 C9J3I0 33 42 SATB1 DNA-binding protein SATB1 yes no 2 0.0028729 91.123 By matching By MS/MS 2 2 41240000 22801000 18439000 3238 618 3676;3677 8368;8369;8370;8371 8191;8192;8193 8193 22 1140 3 LESEGSPETLTNLR EERLNKLRLESEGSPE PETLTNLRKGYLFMYN R L E L R K 0 1 1 0 0 0 3 1 0 0 3 0 0 0 1 2 2 0 0 0 0 0 14 0 1544.7682 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8 H3BPZ1 108 121 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 2 3.0805E-07 132.24 By MS/MS By MS/MS 1 1 23633000 14152000 9480600 3239 1241 3678 8372;8373 8194;8195 8195 2317 2 LESESTSPSLEMK SSEVSKPKLESESTSP TSPSLEMKIHNFLKGN K L E M K I 0 0 0 0 0 0 3 0 0 0 2 1 1 0 1 4 1 0 0 0 0 0 13 0 1436.6705 Q5VT52 Q5VT52 659 671 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 5.2736E-35 182.72 By MS/MS By MS/MS 2 2 120070000 60918000 59153000 3240 2264 3679;3680 8374;8375;8376;8377 8196;8197;8198;8199 8198 907 4539;4540;7651 4 LESLNIQR TIEERKERLESLNIQR LESLNIQREKEELEQR R L E Q R E 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 971.53999 Q14152 Q14152 582 589 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.011363 86.898 By matching By MS/MS 1 1 14988000 7234200 7753400 3241 2085 3681 8378;8379 8200 8200 4114 1 LESLYSDEEDESAVGADK KDRHSALRLESLYSDE ESAVGADKIQMTWTRD R L E D K I 2 0 0 3 0 0 4 1 0 0 2 1 0 0 0 3 0 0 1 1 0 0 18 0 1955.8484 I3L4N6;Q9UP95 I3L4N6 914 931 SLC12A4 Solute carrier family 12 member 4 yes no 2 0.0055668 70.335 By MS/MS By matching 1 1 11758000 5191200 6566700 3242 1314 3682 8380;8381 8201 8201 2439 1 LESPTVSTLTPSSPGK KTLLDRVKLESPTVST LTPSSPGKLLTRSLAL K L E G K L 0 0 0 0 0 0 1 1 0 0 2 1 0 0 3 4 3 0 0 1 0 0 16 0 1599.8356 A0A087WTV6;A0A087WZR9;Q96C36 A0A087WTV6 218 233 PYCR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 yes no 2 0.0028998 79.514 By MS/MS By MS/MS 1 1 20799000 10291000 10508000 3243 46 3683 8382;8383 8202;8203 8202 86;87 2 LESPVAH LRRRRLQKLESPVAH_ KLESPVAH________ K L E A H - 1 0 0 0 0 0 1 0 1 0 1 0 0 0 1 1 0 0 0 1 0 0 7 0 751.38645 Q86TM6 Q86TM6 611 617 SYVN1 E3 ubiquitin-protein ligase synoviolin yes yes 2 0.015636 110.63 By MS/MS By matching 2 1 7396400 3857200 3539200 3244 2399 3684 8384;8385;8386 8204;8205 8204 4896 2 LESTARPSESSEEFLEEEPEQR SLTASINKLESTARPS LEEEPEQRGIEFEDES K L E Q R G 1 2 0 0 0 1 8 0 0 0 2 0 0 1 2 4 1 0 0 0 0 0 22 1 2578.1671 D6RB01;Q9Y6X4 D6RB01 309 330 FAM169A Soluble lamin-associated protein of 75 kDa yes no 3 0.0096013 55.621 By MS/MS 1 13909000 0 13909000 3245 748 3685 8387 8206 8206 7052 1 LESTLYLPELSLSR RGGRTTVRLESTLYLP LPELSLSRLSSTTPPP R L E S R L 0 1 0 0 0 0 2 0 0 0 5 0 0 0 1 3 1 0 1 0 0 0 14 0 1619.877 Q9BZD7 Q9BZD7 171 184 PRRG3 Transmembrane gamma-carboxyglutamic acid protein 3 yes yes 2 0.0008871 85.576 By MS/MS 1 7164500 7164500 0 3246 2783 3686 8388 8207 8207 5787;7838;8454 1 LETPPSK ALSTTSSKLETPPSKL KLETPPSKLGELLFPS K L E S K L 0 0 0 0 0 0 1 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 7 0 770.41742 P35658;A0A0A0MSW3;E9PKD2;B7ZAV2;H0Y837 P35658 1310 1316 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.026098 83.647 By MS/MS By matching 1 1 4948100 2129900 2818200 3247 1801 3687 8389;8390 8208 8208 0 LEVREDPSSNK RTGVSLEKLEVREDPS REDPSSNKDLKVQCDE K L E N K D 0 1 1 1 0 0 2 0 0 0 1 1 0 0 1 2 0 0 0 1 0 0 11 1 1272.631 B4DFB6;Q6IQ26 B4DFB6 462 472 DENND5A DENN domain-containing protein 5A yes no 2 0.02817 66.692 By matching By MS/MS 1 1 13594000 6130700 7463500 3248 547 3688 8391;8392 8209 8209 1 LEVSPEAQPTAR QTRAVKPRLEVSPEAQ PEAQPTARLPSPTDSP R L E A R L 2 1 0 0 0 1 2 0 0 0 1 0 0 0 2 1 1 0 0 1 0 0 12 0 1296.6674 Q6WKZ4 Q6WKZ4 542 553 RAB11FIP1 Rab11 family-interacting protein 1 yes yes 2 0.0051536 79.886 By MS/MS By MS/MS 1 1 31647000 15379000 16268000 3249 2346 3689 8393;8394 8210;8211 8210 4758 2 LEYYENAR ETADAPARLEYYENAR LEYYENARKFRHSVRA R L E A R K 1 1 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 8 0 1056.4876 O14654 O14654 109 116 IRS4 Insulin receptor substrate 4 yes yes 2 0.0091986 87.181 By MS/MS 1 0 0 0 3250 1453 3690 8395 8212 8212 8182 1 LFCVGFTK TTDGYLLRLFCVGFTK LFCVGFTKKRNNQIRK R L F T K K 0 0 0 0 1 0 0 1 0 0 1 1 0 2 0 0 1 0 0 1 0 0 8 0 970.49462 D6RAT0;P61247;D6RAS7;D6R9B6;H0Y8L7;D6RB09;E9PFI5;H0Y9Y4;D6RG13 D6RAT0 100 107 RPS3A 40S ribosomal protein S3a yes no 2 0.018389 101.28 By MS/MS 1 4155100 4155100 0 3251 744 3691 8396 8213 8213 1 LFDDEASVDEPR FTLVCCRRLFDDEASV EASVDEPRRTETSLPE R L F P R R 1 1 0 3 0 0 2 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 12 0 1391.6205 Q8NI35;A0A0U1RR46;A0A0X1KG69;A0A087WUZ6 Q8NI35 639 650 INADL InaD-like protein yes no 2 1.7282E-09 139.74 By MS/MS By MS/MS 1 1 33948000 17325000 16623000 3252 2528 3692 8397;8398 8214;8215 8215 5164 2 LFDDSDER EEEDSSEKLFDDSDER LFDDSDERGTLGGFGS K L F E R G 0 1 0 3 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 8 0 995.4196 O43719 O43719 717 724 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.023087 70.412 By matching By MS/MS 1 1 53238000 27427000 25811000 3253 1505 3693 8399;8400 8216 8216 2821 1 LFDEEEDSSEK EDDDSNEKLFDEEEDS EEEDSSEKLFDDSDER K L F E K L 0 0 0 2 0 0 4 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 11 0 1326.5463 O43719 O43719 706 716 HTATSF1 HIV Tat-specific factor 1 yes yes 2 4.2745E-10 112.94 By MS/MS By MS/MS 1 1 16917000 7555400 9361400 3254 1505 3694 8401;8402 8217;8218 8218 2822;2823 1 LFDEEEDSSEKLFDDSDER EDDDSNEKLFDEEEDS LFDDSDERGTLGGFGS K L F E R G 0 1 0 5 0 0 5 0 0 0 2 1 0 2 0 3 0 0 0 0 0 0 19 1 2303.9554 O43719 O43719 706 724 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.00043762 85.881 By MS/MS By MS/MS 2 3 80333000 48520000 31813000 3255 1505 3695;3696 8403;8404;8405;8406;8407 8219;8220;8221;8222;8223;8224 8223 2821;2822;2823 6 LFDHPESPTPNPTEPLFLAQAEVYK QWDDPDPRLFDHPESP LAQAEVYKELRLRGYD R L F Y K E 2 0 1 1 0 1 3 0 1 0 3 1 0 2 5 1 2 0 1 1 0 0 25 0 2839.4069 A0A0U1RQF0;P49327 A0A0U1RQF0 968 992 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 3 5.223E-07 99.454 By MS/MS By MS/MS 1 1 43351000 21170000 22182000 3256 381 3697 8408;8409 8225;8226 8226 702;6942 2 LFEDDDSNEK EVEDADEKLFEDDDSN EDDDSNEKLFDEEEDS K L F E K L 0 0 1 3 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1210.499 O43719 O43719 696 705 HTATSF1 HIV Tat-specific factor 1 yes yes 1;2 0.00016396 136.27 By MS/MS By MS/MS 3 3 222340000 113430000 108910000 3257 1505 3698;3699 8410;8411;8412;8413;8414;8415 8227;8228;8229;8230;8231;8232;8233 8230 60 2824 7 LFEDDDSNEKLFDEEEDSSEK EVEDADEKLFEDDDSN EEEDSSEKLFDDSDER K L F E K L 0 0 1 5 0 0 6 0 0 0 2 2 0 2 0 3 0 0 0 0 0 0 21 1 2519.0347 O43719 O43719 696 716 HTATSF1 HIV Tat-specific factor 1 yes yes 2;3 6.0707E-12 140.27 By MS/MS By MS/MS 2 3 313310000 165150000 148160000 3258 1505 3700;3701 8416;8417;8418;8419;8420 8234;8235;8236;8237;8238 8237 2822;2823;2824 5 LFEDDDSNEKLFDEEEDSSEKLFDDSDER EVEDADEKLFEDDDSN LFDDSDERGTLGGFGS K L F E R G 0 1 1 8 0 0 7 0 0 0 3 2 0 3 0 4 0 0 0 0 0 0 29 2 3496.4438 O43719 O43719 696 724 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.0015853 67.218 By MS/MS 1 0 0 0 3259 1505 3702 8421 8239 8239 60 2821;2822;2823;2824 1 LFEESDDKEDEDADGK EEGDADEKLFEESDDK EDEDADGKEVEDADEK K L F G K E 1 0 0 5 0 0 4 1 0 0 1 2 0 1 0 1 0 0 0 0 0 0 16 1 1840.7487 O43719 O43719 672 687 HTATSF1 HIV Tat-specific factor 1 yes yes 2;3 7.7986E-42 177.41 By MS/MS By MS/MS 2 2 437670000 261850000 175820000 3260 1505 3703 8422;8423;8424;8425 8240;8241;8242;8243 8241 2825 4 LFEESDDKEDEDADGKEVEDADEK EEGDADEKLFEESDDK EVEDADEKLFEDDDSN K L F E K L 2 0 0 7 0 0 7 1 0 0 1 3 0 1 0 1 0 0 0 1 0 0 24 2 2756.1308 O43719 O43719 672 695 HTATSF1 HIV Tat-specific factor 1 yes yes 3;4 1.3192E-05 102.24 By MS/MS By MS/MS 3 3 142930000 65058000 77871000 3261 1505 3704 8426;8427;8428;8429;8430;8431 8244;8245;8246;8247;8248 8244 2825 5 LFEGNALLR LDEKDPRRLFEGNALL FEGNALLRRLVRIGVL R L F L R R 1 1 1 0 0 0 1 1 0 0 3 0 0 1 0 0 0 0 0 0 0 0 9 0 1031.5764 A0A024R4M0;P46781;B5MCT8;C9JM19 A0A024R4M0 71 79 RPS9 40S ribosomal protein S9 yes no 2 0.0060682 110.31 By MS/MS By MS/MS 1 1 8779600 4006500 4773100 3262 3 3705 8432;8433 8249;8250 8249 2 LFGEGYSGLEYDYR RSIAIGKKLFGEGYSG SGLEYDYRGLIKLYNS K L F Y R G 0 1 0 1 0 0 2 3 0 0 2 0 0 1 0 1 0 0 3 0 0 0 14 0 1667.7468 Q92624 Q92624 505 518 APPBP2 Amyloid protein-binding protein 2 yes yes 2 0.0245 84.297 By MS/MS 1 0 0 0 3263 2591 3706 8434 8251 8251 5323 1 LFIGGLNTETNEK VEADRPGKLFIGGLNT LNTETNEKALEAVFGK K L F E K A 0 0 2 0 0 0 2 2 0 1 2 1 0 1 0 0 2 0 0 0 0 0 13 0 1434.7355 P38159;H0Y6E7;H3BT71;Q96E39;H3BR27;A0A1B0GUK8;H3BNC1 P38159 10 22 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 2 2.6203E-06 127.83 By matching By MS/MS 1 1 14198000 6172000 8025700 3264 1806 3707 8435;8436 8252;8253 8252 2 LFLDHDKTLQTDSIDSFETQRTPR KNKDLDARLFLDHDKT FETQRTPRKSNLDEEV R L F P R K 0 2 0 4 0 2 1 0 1 1 3 1 0 2 1 2 4 0 0 0 0 0 24 2 2862.4148 P06400 P06400 335 358 RB1 Retinoblastoma-associated protein yes yes 4 0.022882 48.968 By MS/MS 1 13739000 13739000 0 3265 1645 3708 8437 8254 8254 1 LFLINEQSPR GINKLLNKLFLINEQS LINEQSPRASEETLLG K L F P R A 0 1 1 0 0 1 1 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 10 0 1215.6612 E9PFF8;Q6NW34 E9PFF8 188 197 C3orf17 Uncharacterized protein C3orf17 yes no 2 7.5323E-05 142.83 By MS/MS By MS/MS 1 1 13986000 7035100 6950600 3266 865 3709 8438;8439 8255;8256;8257 8255 1594 3 LFMAQALQEYNN FTAQNLGKLFMAQALQ QALQEYNN________ K L F N N - 2 0 2 0 0 2 1 0 0 0 2 0 1 1 0 0 0 0 1 0 0 0 12 0 1440.6708 A0A087WZK9;B3KS98;O15372 A0A087WZK9 338 349 EIF3H Eukaryotic translation initiation factor 3 subunit H yes no 2 6.7372E-09 135.71 By MS/MS By MS/MS 2 2 13962000 8066500 5896000 3267 142 3710;3711 8440;8441;8442;8443 8258;8259;8260 8259 52 3 LFPDTPLALDANKK AALAALEKLFPDTPLA LALDANKKKRAPVPVR K L F K K K 2 0 1 2 0 0 0 0 0 0 3 2 0 1 2 0 1 0 0 0 0 0 14 1 1541.8453 Q12906 Q12906 588 601 ILF3 Interleukin enhancer-binding factor 3 yes yes 2 0.027407 53.377 By MS/MS By matching 1 1 8720600 6244800 2475800 3268 2033 3712 8444;8445 8261 8261 0 LFPEFDDSDYDEVPEEGPGAPAR EIPPKPVRLFPEFDDS EGPGAPARVMTKKEEP R L F A R V 2 1 0 4 0 0 4 2 0 0 1 0 0 2 4 1 0 0 1 1 0 0 23 0 2551.1027 Q96P48 Q96P48 222 244 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes yes 2 0.016022 63.037 By MS/MS By matching 1 1 15870000 10712000 5157100 3269 2692 3713 8446;8447 8262 8262 5563;8428 1 LFPSPGLPTRTSPVR SHEIQPLRLFPSPGLP PTRTSPVRGSKRMVST R L F V R G 0 2 0 0 0 0 0 1 0 0 2 0 0 1 4 2 2 0 0 1 0 0 15 1 1623.9097 M0QYT1;M0R2C2;Q8IY17 M0QYT1 162 176 PNPLA6 Neuropathy target esterase yes no 3 0.0057903 69.602 By MS/MS By MS/MS 1 1 20826000 12009000 8817300 3270 1409 3714 8448;8449 8263;8264 8264 2583;7274 2 LFQEDDEIPLYLK NKVPEKQKLFQEDDEI DEIPLYLKGGVADALL K L F L K G 0 0 0 2 0 1 2 0 0 1 3 1 0 1 1 0 0 0 1 0 0 0 13 0 1621.8239 D6RIE3;D6RGV5;H0UI06;P14406 D6RIE3 34 46 COX7A2 Cytochrome c oxidase subunit 7A2, mitochondrial yes no 2 3.0905E-12 169.65 By MS/MS By MS/MS 1 1 5278300 5278300 0 3271 764 3715 8450;8451 8265;8266 8265 2 LFQLGPPSPVK DEEGELEKLFQLGPPS LGPPSPVKMPSPPWEC K L F V K M 0 0 0 0 0 1 0 1 0 0 2 1 0 1 3 1 0 0 0 1 0 0 11 0 1181.6808 Q9NZH5;O95997 Q9NZH5 158 168 PTTG2;PTTG1 Securin-2;Securin yes no 2 1.7351E-39 198.74 By MS/MS By MS/MS 2 1 36112000 18234000 17878000 3272 1613 3716 8452;8453;8454 8267;8268;8269;8270 8267 3056 4 LFQQIYSDGSDEVKR EGDAALNRLFQQIYSD DGSDEVKRAMNKSFME R L F K R A 0 1 0 2 0 2 1 1 0 1 1 1 0 1 0 2 0 0 1 1 0 0 15 1 1783.8741 Q9Y2Z0 Q9Y2Z0 312 326 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 3 0.00058806 87.863 By MS/MS By MS/MS 1 1 24680000 12730000 11950000 3273 3100 3717 8455;8456 8271;8272;8273 8273 8509 3 LFQVEYAIEAIK NTFSPEGRLFQVEYAI EYAIEAIKLGSTAIGI R L F I K L 2 0 0 0 0 1 2 0 0 2 1 1 0 1 0 0 0 0 1 1 0 0 12 0 1422.7759 P28066 P28066 21 32 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.001263 104.79 By matching By MS/MS 1 1 7342200 3723400 3618800 3274 1770 3718 8457;8458 8274 8274 8248 1 LFRPPSPAPAAPGAR PAGSRSGRLFRPPSPA APAAPGARLLRLPGSG R L F A R L 4 2 0 0 0 0 0 1 0 0 1 0 0 1 5 1 0 0 0 0 0 0 15 1 1503.831 Q86U90 Q86U90 32 46 YRDC YrdC domain-containing protein, mitochondrial yes yes 3 0.0010053 82.925 By MS/MS By MS/MS 2 2 158500000 104260000 54237000 3275 2400 3719 8459;8460;8461;8462 8275;8276;8277 8275 4897 2 LFSADPFDLEAQAK RREQERIRLFSADPFD FDLEAQAKIEEDIRQQ R L F A K I 3 0 0 2 0 1 1 0 0 0 2 1 0 2 1 1 0 0 0 0 0 0 14 0 1550.7617 Q5TDH0;H0YII4;H0YI90 Q5TDH0 192 205 DDI2 Protein DDI1 homolog 2 yes no 2 1.7113E-27 172.09 By MS/MS By MS/MS 1 1 51600000 29863000 21737000 3276 2256 3720 8463;8464 8278;8279 8279 4511 2 LFSLSNPSLSTTNLSGPSR SALHPSLRLFSLSNPS TNLSGPSRRRQPPVSP R L F S R R 0 1 2 0 0 0 0 1 0 0 4 0 0 1 2 6 2 0 0 0 0 0 19 0 1977.0167 Q6UUV7 Q6UUV7 366 384 CRTC3 CREB-regulated transcription coactivator 3 yes yes 2 3.9216E-23 155.16 By MS/MS By MS/MS 1 1 50022000 24622000 25400000 3277 2339 3721 8465;8466 8280;8281;8282 8282 4725 3 LFSPVIAR KTPDSEDKLFSPVIAR LFSPVIARNLADEIES K L F A R N 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 1 0 0 8 0 901.53854 R4GNB2;R4GN35;Q5VZ89;X6RAE7;X6R5W5 R4GNB2 1223 1230 DENND4C DENN domain-containing protein 4C yes no 2 0.0083577 102.77 By MS/MS By MS/MS 1 1 25255000 15220000 10035000 3278 2281 3722 8467;8468 8283;8284 8283 4582 2 LFSQGQDVSNK LTFKERQRLFSQGQDV QGQDVSNKVKASRKLT R L F N K V 0 0 1 1 0 2 0 1 0 0 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1221.599 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1754 1764 MLLT4 Afadin yes no 2 8.5619E-05 120.6 By MS/MS By MS/MS 1 1 351460000 170220000 181240000 3279 494 3723 8469;8470 8285;8286 8286 901 2 LFSQGQDVSNKVK LTFKERQRLFSQGQDV QDVSNKVKASRKLTEL R L F V K A 0 0 1 1 0 2 0 1 0 0 1 2 0 1 0 2 0 0 0 2 0 0 13 1 1448.7623 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1754 1766 MLLT4 Afadin yes no 2 0.0015403 97.203 By MS/MS By MS/MS 1 1 26453000 14486000 11967000 3280 494 3724 8471;8472 8287;8288 8288 901 2 LFSSSFNGGR QRGGGSSKLFSSSFNG SSSFNGGRRDEVAEAQ K L F G R R 0 1 1 0 0 0 0 2 0 0 1 0 0 2 0 3 0 0 0 0 0 0 10 0 1070.5145 F5H5P6;Q8N5U6;H0YGL7 F5H5P6 56 65 RNF10 RING finger protein 10 yes no 1 0.027903 42.864 By matching By MS/MS 1 1 33364000 13687000 19677000 3281 978 3725 8473;8474 8289 8289 1831;1832 1 LFTPSRSQEEEEEK TPPPKPPRLFTPSRSQ SQEEEEEKAAVGLSNR R L F E K A 0 1 0 0 0 1 5 0 0 0 1 1 0 1 1 2 1 0 0 0 0 0 14 1 1707.7952 A0A1B0GTL5 A0A1B0GTL5 907 920 yes yes 3 0.0021093 77.74 By MS/MS 1 9369300 9369300 0 3282 410 3726 8475 8290 8290 756 1 LFTSTGLK VQGSPLKKLFTSTGLK LFTSTGLKKLSGKKQK K L F L K K 0 0 0 0 0 0 0 1 0 0 2 1 0 1 0 1 2 0 0 0 0 0 8 0 865.49092 Q02952 Q02952 519 526 AKAP12 A-kinase anchor protein 12 yes yes 2 0.00080637 153.24 By MS/MS By MS/MS 1 1 7817700 3777600 4040000 3283 1991 3727 8476;8477 8291;8292 8291 3828 2 LFTVQFSSAYSEIER GLDSLPQKLFTVQFSS SAYSEIERYPRNQDEK K L F E R Y 1 1 0 0 0 1 2 0 0 1 1 0 0 2 0 3 1 0 1 1 0 0 15 0 1775.873 K7EMN7 K7EMN7 115 129 AP2B1 yes yes 2 0.015853 64.52 By MS/MS 1 0 0 0 3284 1384 3728 8478 8293 8293 2551;2552;8170 1 LFVENDSPSDGGTPGR PASTTRRRLFVENDSP SDGGTPGRMPPQPLVN R L F G R M 0 1 1 2 0 0 1 3 0 0 1 0 0 1 2 2 1 0 0 1 0 0 16 0 1646.7536 Q08999;F5H837 Q08999 682 697 RBL2 Retinoblastoma-like protein 2 yes no 2 0.0014779 90.259 By MS/MS By MS/MS 1 1 7169600 3118700 4050900 3285 2016 3729 8479;8480 8294;8295;8296 8294 3886;3887;7532 3 LFVGNLPADITEDEFKR KTYTQRCRLFVGNLPA ITEDEFKRLFAKYGEP R L F K R L 1 1 1 2 0 0 2 1 0 1 2 1 0 2 1 0 1 0 0 1 0 0 17 1 1963.0051 P23246 P23246 299 315 SFPQ Splicing factor, proline- and glutamine-rich yes yes 3 1.2137E-16 151.07 By MS/MS By MS/MS 1 1 14043000 9294800 4748000 3286 1753 3730 8481;8482 8297;8298 8298 2 LFVLLPEQSPVSYSK DRHANTIRLFVLLPEQ QSPVSYSKRTAYQKAG R L F S K R 0 0 0 0 0 1 1 0 0 0 3 1 0 1 2 3 0 0 1 2 0 0 15 0 1705.9291 Q96K76 Q96K76 824 838 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 2 0.0010697 93.478 By MS/MS 1 6178600 6178600 0 3287 2677 3731 8483 8299 8299 5533 1 LFVTNDAATILR MVINHLEKLFVTNDAA NDAATILRELEVQHPA K L F L R E 2 1 1 1 0 0 0 0 0 1 2 0 0 1 0 0 2 0 0 1 0 0 12 0 1332.7402 P50990;H7C4C8 P50990 63 74 CCT8 T-complex protein 1 subunit theta yes no 2 0.0077531 83.883 By MS/MS 1 2043600 0 2043600 3288 1871 3732 8484 8300 8300 1 LGAAPEEESAYVAGEK PFAGGGYRLGAAPEEE SAYVAGEKRQHSSQDV R L G E K R 4 0 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 16 0 1619.7679 Q9UNZ2;F2Z2K0 Q9UNZ2 157 172 NSFL1C NSFL1 cofactor p47 yes no 2 2.8703E-53 190.78 By MS/MS By MS/MS 1 1 63274000 31069000 32205000 3289 3063 3733 8485;8486 8301;8302 8302 6465;8504 2 LGAAPEEESAYVAGEKR PFAGGGYRLGAAPEEE AYVAGEKRQHSSQDVH R L G K R Q 4 1 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 17 1 1775.869 Q9UNZ2;F2Z2K0 Q9UNZ2 157 173 NSFL1C NSFL1 cofactor p47 yes no 2;3 2.2619E-52 188.15 By MS/MS By MS/MS 2 2 517750000 267570000 250180000 3290 3063 3734 8487;8488;8489;8490 8303;8304;8305;8306 8304 6465;8504 4 LGADESEEEGR GENSRVARLGADESEE DESEEEGRRGSLSNAG R L G G R R 1 1 0 1 0 0 4 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 11 0 1190.5051 F5H7V1;B1AKJ5;O43847 F5H7V1 81 91 NRD1 Nardilysin yes no 2 0.0001151 118.61 By matching By MS/MS 1 1 9744100 4758100 4986000 3291 521 3735 8491;8492 8307 8307 976 1 LGAGEGGEASVSPEK PRSKKKKKLGAGEGGE EASVSPEKTSTTSKGK K L G E K T 2 0 0 0 0 0 3 4 0 0 1 1 0 0 1 2 0 0 0 1 0 0 15 0 1386.6627 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1343 TCOF1 Treacle protein no no 2 1.1748E-33 173.77 By MS/MS By MS/MS 1 1 72010000 38138000 33872000 3292 822;2059 3736 8493;8494 8308;8309;8310;8311;8312 8311 1499;1500 5 LGAGEGGEASVSPEKTSTTSK PRSKKKKKLGAGEGGE EKTSTTSKGKAKRDKA K L G S K G 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 4 3 0 0 1 0 0 21 1 1991.9647 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1349 TCOF1 Treacle protein no no 2 0.00017522 118.84 By MS/MS By MS/MS 1 1 567230000 306560000 260670000 3293 822;2059 3737 8495;8496 8313;8314;8315 8314 1499;1500 3 LGAGGGSPEK EEKEGGARLGAGGGSP AGGGSPEKSPSAQELK R L G E K S 1 0 0 0 0 0 1 4 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 0 871.43995 H3BS86;Q9UNE7 H3BS86 13 22 STUB1 E3 ubiquitin-protein ligase CHIP yes no 2 0.02086 64.121 By MS/MS 1 3376900 3376900 0 3294 1249 3738 8497 8316 8316 2329 1 LGAGGGSPEKSPSAQELK EEKEGGARLGAGGGSP SPSAQELKEQGNRLFV R L G L K E 2 0 0 0 0 1 2 4 0 0 2 2 0 0 2 3 0 0 0 0 0 0 18 1 1711.8741 H3BS86;Q9UNE7 H3BS86 13 30 STUB1 E3 ubiquitin-protein ligase CHIP yes no 2;3 0.00074118 81.639 By MS/MS By MS/MS 3 3 1105300000 572950000 532310000 3295 1249 3739;3740 8498;8499;8500;8501;8502;8503 8317;8318;8319;8320;8321 8318 2329;2330 5 LGAPENSGISTLER QRPTPGSRLGAPENSG SGISTLERGQKPPPTP R L G E R G 1 1 1 0 0 0 2 2 0 1 2 0 0 0 1 2 1 0 0 0 0 0 14 0 1442.7365 C9JME2;Q9Y4F1;A0A1B0GV68;M0QYB0 C9JME2 14 27 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 2 2.6241E-20 158.31 By MS/MS By MS/MS 1 1 114900000 60833000 54069000 3296 676 3741 8504;8505 8322;8323 8323 7035 2 LGASNSPGQPNSVK PKIGLSLKLGASNSPG PGQPNSVKRKKLPVDS K L G V K R 1 0 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 14 0 1354.6841 P49756 P49756 672 685 RBM25 RNA-binding protein 25 yes yes 2 5.166E-43 189.04 By MS/MS By MS/MS 3 3 1126700000 571000000 555740000 3297 1858 3742;3743 8506;8507;8508;8509;8510;8511 8324;8325;8326;8327;8328;8329 8325 91;157 3583 6 LGASNSPGQPNSVKR PKIGLSLKLGASNSPG GQPNSVKRKKLPVDSV K L G K R K 1 1 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 15 1 1510.7852 P49756 P49756 672 686 RBM25 RNA-binding protein 25 yes yes 2 0.0015498 92.269 By MS/MS By matching 1 1 77924000 42531000 35393000 3298 1858 3744 8512;8513 8330 8330 3583 1 LGDLYEEEMR LKGQGKSRLGDLYEEE DLYEEEMRELRRQVDQ R L G M R E 0 1 0 1 0 0 3 1 0 0 2 0 1 0 0 0 0 0 1 0 0 0 10 0 1253.5598 P08670;B0YJC4;A0A1B0GUA0 P08670 146 155 VIM Vimentin yes no 2 0.0074672 99.013 By MS/MS By MS/MS 1 1 27172000 10210000 16961000 3299 1663 3745 8514;8515 8331;8332 8331 2 LGDSSLSR RRREEERRLGDSSLSR LGDSSLSRKDSRWGDR R L G S R K 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 0 0 0 8 0 833.4243 Q14152 Q14152 878 885 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0087069 100.25 By MS/MS By MS/MS 1 1 8782800 4616600 4166200 3300 2085 3746 8516;8517 8333;8334;8335 8333 4115;4116 3 LGDVSPTQIDVSQFGSFK ALALDERKLGDVSPTQ VSQFGSFKEDTKMSIS K L G F K E 0 0 0 2 0 2 0 2 0 1 1 1 0 2 1 3 1 0 0 2 0 0 18 0 1923.9578 P46821 P46821 1497 1514 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 5.145E-10 138.28 By MS/MS By MS/MS 2 1 41258000 23287000 17972000 3301 1840 3747 8518;8519;8520 8336;8337;8338 8338 3499;7452 3 LGEASDSELADADK TSLLRRARLGEASDSE SELADADKASVASEVS R L G D K A 3 0 0 3 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 14 0 1419.6365 H0Y2V6;Q5SW79 H0Y2V6 1072 1085 CEP170 Centrosomal protein of 170 kDa yes no 2 6.8352E-07 128.74 By MS/MS By MS/MS 1 1 64250000 31068000 33182000 3302 1112 3748 8521;8522 8339;8340 8339 2092 2 LGEHNIDVLEGNEQFINAAK YKSRIQVRLGEHNIDV EQFINAAKIITHPNFN R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 3 0.00020728 92.563 By MS/MS 1 0 0 0 + 3303 711 3749 8523 8341 8341 1 LGELTMQLHPVADSSPAGAK AAGAAFTKLGELTMQL DSSPAGAKWTETEIEM K L G A K W 3 0 0 1 0 1 1 2 1 0 3 1 1 0 2 2 1 0 0 1 0 0 20 0 2021.0252 F8W038;H0YIS7;Q8IXM2 F8W038 22 41 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 2;3 0.0018598 66.12 By MS/MS By MS/MS 3 2 47999000 27712000 20287000 3304 1028 3750;3751 8524;8525;8526;8527;8528 8342;8343;8344;8345;8346 8342 373 1925;1926 5 LGEWVGLCK IKVDDNKKLGEWVGLC GEWVGLCKIDREGKPR K L G C K I 0 0 0 0 1 0 1 2 0 0 2 1 0 0 0 0 0 1 0 1 0 0 9 0 1060.5376 P25398 P25398 85 93 RPS12 40S ribosomal protein S12 yes yes 2 0.0030653 122.18 By MS/MS By MS/MS 1 1 6242300 2663500 3578800 3305 1762 3752 8529;8530 8347;8348 8347 2 LGEYEDVSR VIDHSGARLGEYEDVS GEYEDVSRVEKYTISQ R L G S R V 0 1 0 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1066.4931 Q99426;K7EP07;K7EK42;K7EL99 Q99426 95 103 TBCB Tubulin-folding cofactor B yes no 2 0.00074927 150.36 By MS/MS By MS/MS 1 1 190350000 106590000 83761000 3306 2719 3753 8531;8532 8349;8350;8351 8349 8435 3 LGEYEDVSRVEK VIDHSGARLGEYEDVS EDVSRVEKYTISQEAY R L G E K Y 0 1 0 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 1 2 0 0 12 1 1422.6991 Q99426;K7EP07;K7EK42 Q99426 95 106 TBCB Tubulin-folding cofactor B yes no 2 1.9228E-19 166.29 By MS/MS By MS/MS 1 1 106360000 57126000 49229000 3307 2719 3754 8533;8534 8352;8353 8353 8435 2 LGFINWDAINKDQRSSR FWKNFKSKLGFINWDA NKDQRSSRIP______ K L G S R I 1 2 2 2 0 1 0 1 0 2 1 1 0 1 0 2 0 1 0 0 0 0 17 2 2019.0286 A3EZ84;M0R3F8;E9PAQ7;E7EMS7 A3EZ84 15 31 DMKN yes no 2 0.025785 52.569 By MS/MS By matching 1 1 102060000 49637000 52425000 3308 457 3755 8535;8536 8354 8354 852;853 1 LGFSEVELVQMVVDGVK FDVSNADRLGFSEVEL QMVVDGVKLLIEMEQR R L G V K L 0 0 0 1 0 1 2 2 0 0 2 1 1 1 0 1 0 0 0 5 0 0 17 0 1847.9703 P12277;H0YJG0 P12277 342 358 CKB Creatine kinase B-type yes no 2 0.0040113 88.075 By MS/MS By MS/MS 1 1 8798800 6099700 2699000 3309 1687 3756 8537;8538 8355;8356 8355 626 2 LGFSLTPSK TADKLAIKLGFSLTPS GFSLTPSKGKTSGTTS K L G S K G 0 0 0 0 0 0 0 1 0 0 2 1 0 1 1 2 1 0 0 0 0 0 9 0 948.52803 P38432 P38432 298 306 COIL Coilin yes yes 2 0.011123 94.767 By MS/MS By MS/MS 1 1 20927000 11602000 9325000 3310 1807 3757 8539;8540 8357;8358 8357 7438 2 LGFSSPYEGVLNKSPK QNAPWPLKLGFSSPYE GVLNKSPKTRDIQEEE K L G P K T 0 0 1 0 0 0 1 2 0 0 2 2 0 1 2 3 0 0 1 1 0 0 16 1 1721.8988 M0R0P8;Q13459;M0R240;M0QXP0 M0R0P8 1922 1937 MYO9B Unconventional myosin-IXb yes no 3 0.019343 66.152 By MS/MS By MS/MS 1 1 0 0 0 3311 1419 3758 8541;8542 8359;8360 8359 2599 2 LGGAVPFAPPEVSPEQAK SCRPPPGKLGGAVPFA EVSPEQAKTVQGGRKN K L G A K T 3 0 0 0 0 1 2 2 0 0 1 1 0 1 4 1 0 0 0 2 0 0 18 0 1792.9359 A0A096LNZ0;A0A096LP25;Q6ZSR9 A0A096LNZ0 205 222 AAK1 Uncharacterized protein FLJ45252 yes no 2 0.00042402 105.5 By matching By MS/MS 1 1 48823000 25362000 23461000 3312 181 3759 8543;8544 8361 8361 303 1 LGGLRPESPESLTSVSR TPLRRSRRLGGLRPES ESLTSVSRTRRALVEF R L G S R T 0 2 0 0 0 0 2 2 0 0 3 0 0 0 2 4 1 0 0 1 0 0 17 1 1783.9428 Q9H6F5;H0YG79 Q9H6F5 11 27 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 0.00014132 108.12 By MS/MS By MS/MS 2 2 914500000 471960000 442540000 3313 2841 3760 8545;8546;8547;8548 8362;8363;8364;8365 8364 5974 4 LGGLTQAPGNPVLAVQINQDK DFFNAQMRLGGLTQAP AVQINQDKNFAFLEFR R L G D K N 2 0 2 1 0 3 0 3 0 1 3 1 0 0 2 0 1 0 0 2 0 0 21 0 2132.159 P26368;K7ENG2 P26368 175 195 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 3 0.023419 53.625 By MS/MS 1 2822500 0 2822500 3314 1766 3761 8549 8366 8366 0 LGGPEGPGSPLLAT YRINLQMRLGGPEGPG PGSPLLAT________ R L G A T - 1 0 0 0 0 0 1 4 0 0 3 0 0 0 3 1 1 0 0 0 0 0 14 0 1264.6663 Q9C086 Q9C086 343 356 INO80B INO80 complex subunit B yes yes 2 0.0002108 118.61 By MS/MS By MS/MS 1 1 17492000 10259000 7232500 3315 2787 3762 8550;8551 8367;8368 8368 5797 2 LGGSVLGQIPFLQNCEDEDSDEDDELDSVQHK AGKDGKERLGGSVLGQ ELDSVQHKKQRVKLPS R L G H K K 0 0 1 6 1 3 4 3 1 1 4 1 0 1 1 3 0 0 0 2 0 0 32 0 3587.5846 R4GN16;F5GYK2;Q9NRL3 R4GN16 107 138 STRN4 Striatin-4 yes no 3 2.715E-11 103.33 By MS/MS By MS/MS 1 1 68642000 36917000 31725000 3316 948 3763 8552;8553 8369;8370 8370 1781 2 LGHSRASVIWHRTQGDAILEK DKGPCRNKLGHSRASV QGDAILEKCILHNTES K L G E K C 2 2 0 1 0 1 1 2 2 2 2 1 0 0 0 2 1 1 0 1 0 0 21 2 2373.2666 H7C3G0 H7C3G0 232 252 RNF144A yes yes 2 0.020982 61.167 By MS/MS 1 0 0 0 3317 1283 3764 8554 8371 8371 2370;2371 1 LGIAVIHGEAQDAESDLVDGRHSPPMVR QSFAERLRLGIAVIHG RHSPPMVRSVAAIHPS R L G V R S 3 2 0 3 0 1 2 3 2 2 2 0 1 0 2 2 0 0 0 3 0 0 28 1 2968.4825 C9K0K7;I3L0S1;E7EPA1;O60256 C9K0K7 205 232 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes no 4 1.933E-05 76.796 By MS/MS By MS/MS 1 1 52242000 20782000 31459000 3318 708 3765 8555;8556 8372;8373;8374 8374 1313 3 LGIHEDSQNR EQFSKNIKLGIHEDSQ IHEDSQNRKKLSELLR K L G N R K 0 1 1 1 0 1 1 1 1 1 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1167.5632 P07900 P07900 447 456 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 3 0.009545 113.18 By MS/MS By matching 1 1 7180800 3775800 3405000 3319 1656 3766 8557;8558 8375 8375 1 LGKQNLESSGQQGYLLGK L G G K 0 0 1 0 0 3 1 4 0 0 4 2 0 0 0 2 0 0 1 0 0 0 18 1 1919.0112 REV__Q9C0D4 yes yes 3 0.0044084 60.489 By MS/MS 1 42380000 42380000 0 + 3320 3223 3767 8559 8376 8376 6819;6820;8519 1 LGLDYEER ELPSMYQRLGLDYEER LGLDYEERVLPSIVNE R L G E R V 0 1 0 1 0 0 2 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 8 0 993.47673 F5H3X6;F5GWA7;F5GY37;J3KPX7;Q99623 F5H3X6 135 142 PHB2 Prohibitin-2 yes no 2 0.00020496 104.75 By matching By MS/MS 1 1 8756700 4410500 4346200 3321 938 3768 8560;8561 8377 8377 0 LGLGTLSSSLSR ACCRDYQRLGLGTLSS TLSSSLSRAKSEPFRI R L G S R A 0 1 0 0 0 0 0 2 0 0 4 0 0 0 0 4 1 0 0 0 0 0 12 0 1189.6667 G5E933;O95248 G5E933 1134 1145 SBF1 Myotubularin-related protein 5 yes no 2 6.4155E-10 143.94 By MS/MS By MS/MS 2 2 82439000 47581000 34858000 3322 1095 3769 8562;8563;8564;8565 8378;8379;8380;8381 8381 2056;7178 4 LGLHVTPSNVDQVSTPPAAK FFHIQAQKLGLHVTPS VSTPPAAKKSRI____ K L G A K K 2 0 1 1 0 1 0 1 1 0 2 1 0 0 3 2 2 0 0 3 0 0 20 0 2030.0797 Q9NRL2 Q9NRL2 1533 1552 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 3 3.5582E-07 127.49 By MS/MS By MS/MS 1 1 57896000 30437000 27459000 3323 2908 3770 8566;8567 8382;8383;8384 8384 6135;7876 3 LGLLGALMAEDGVRGSPPVPSGPPMEEDGLR PRGPPPPRLGLLGALM PMEEDGLRWTPKSPLD R L G L R W 2 2 0 2 0 0 3 6 0 0 5 0 2 0 5 2 0 0 0 2 0 0 31 1 3116.5635 A0A087X0R7;Q9H4L4 A0A087X0R7 127 157 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 0.0013319 59.646 By MS/MS 1 11172000 0 11172000 3324 161 3771 8568 8385 8385 61;62 261 1 LGLPLLTDCAQPSRPHGSPSR AAPAPTVRLGLPLLTD RPHGSPSRSKPKKKSK R L G S R S 1 2 0 1 1 1 0 2 1 0 4 0 0 0 4 3 1 0 0 0 0 0 21 1 2258.159 U3KQ90;P55199 U3KQ90 292 312 ELL RNA polymerase II elongation factor ELL yes no 3 0.00081115 72.433 By MS/MS By MS/MS 1 1 26683000 15770000 10914000 3325 1911 3772 8569;8570 8386;8387;8388 8388 3696;7492 3 LGMLSPEGTCK NTSVQFLRLGMLSPEG LSPEGTCKAFDTAGNG R L G C K A 0 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 1 0 0 0 0 0 11 0 1191.5628 A0A0U1RQF0;P49327 A0A0U1RQF0 203 213 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 0.0021256 89.43 By MS/MS By MS/MS 1 1 27789000 15607000 12182000 3326 381 3773 8571;8572 8389;8390 8389 703 2 LGNAGDVCVPQASPR EGTSPGDRLGNAGDVC CVPQASPRRWRPKINW R L G P R R 2 1 1 1 1 1 0 2 0 0 1 0 0 0 2 1 0 0 0 2 0 0 15 0 1539.7464 Q9H0W5 Q9H0W5 249 263 CCDC8 Coiled-coil domain-containing protein 8 yes yes 2 2.9255E-43 188.16 By MS/MS By MS/MS 1 1 78762000 43448000 35314000 3327 2807 3774 8573;8574 8391;8392 8391 5873 2 LGPGRPLPTFPTSECTSDVEPDTR EDDARARKLGPGRPLP SDVEPDTREMA_____ K L G T R E 0 2 0 2 1 0 2 2 0 0 2 0 0 1 5 2 4 0 0 1 0 0 24 1 2628.249 H0YHZ9;Q8TDD1 H0YHZ9 56 79 DDX54 ATP-dependent RNA helicase DDX54 yes no 3 1.7357E-27 160.33 By MS/MS By MS/MS 1 1 170610000 89368000 81245000 3328 1189 3775 8575;8576 8393;8394 8394 2229 2 LGPQNFIDETSDIENLLKEEEDYKEENNDSK SQVSSGQKLGPQNFID KEENNDSKETSGALKW K L G S K E 0 0 4 4 0 1 7 1 0 2 3 3 0 1 1 2 1 0 1 0 0 0 31 2 3654.6697 Q14692 Q14692 629 659 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 3;4 4.4851E-10 100.71 By MS/MS By MS/MS 2 2 166880000 71827000 95050000 3329 2105 3776 8577;8578;8579;8580 8395;8396;8397 8397 4164;7584 3 LGPRPVPPPRPESTGTVGPGQAQQR SGPKLAPRLGPRPVPP GPGQAQQRLEQTSSSL R L G Q R L 1 3 0 0 0 3 1 4 0 0 1 0 0 0 7 1 2 0 0 2 0 0 25 2 2578.3728 Q8WXE0 Q8WXE0 1123 1147 CASKIN2 Caskin-2 yes yes 3 0.028437 51.568 By matching By MS/MS 1 1 20198000 8909400 11289000 3330 2568 3777 8581;8582 8398 8398 0 LGQGVLVQVSPSLVK TRSLKYGKLGQGVLVQ QVSPSLVKRQKTHFHD K L G V K R 0 0 0 0 0 2 0 2 0 0 3 1 0 0 1 2 0 0 0 4 0 0 15 0 1522.9083 Q13868 Q13868 166 180 EXOSC2 Exosome complex component RRP4 yes yes 2 0.00084416 106.3 By MS/MS 1 2011600 2011600 0 3331 2078 3778 8583 8399 8399 4096 1 LGSAEQSSPDLSFLVVK SNSKKLERLGSAEQSS DLSFLVVKNNMGEKHL R L G V K N 1 0 0 1 0 1 1 1 0 0 3 1 0 1 1 4 0 0 0 2 0 0 17 0 1775.9305 D3DP56;A0A0A0MTC0;Q96LW4 D3DP56 124 140 FLJ33167;PRIMPOL DNA-directed primase/polymerase protein yes no 2 1.6954E-63 191.36 By MS/MS By MS/MS 1 1 29883000 16439000 13444000 3332 268 3779 8584;8585 8400;8401 8400 474 2 LGSDLTSAQK EQKQKMRRLGSDLTSA SDLTSAQKEMKTKHKA R L G Q K E 1 0 0 1 0 1 0 1 0 0 2 1 0 0 0 2 1 0 0 0 0 0 10 0 1018.5295 Q08378 Q08378 981 990 GOLGA3 Golgin subfamily A member 3 yes yes 2 0.00036415 126.66 By matching By MS/MS 1 1 10144000 5312000 4831600 3333 2013 3780 8586;8587 8402;8403 8403 3881 2 LGSEIRDSVV VCPRPRVRLGSEIRDS SEIRDSVV________ R L G V V - 0 1 0 1 0 0 1 1 0 1 1 0 0 0 0 2 0 0 0 2 0 0 10 1 1073.5717 J3KNP4;Q9NPR2 J3KNP4 828 837 SEMA4B Semaphorin-4B yes no 2 0.0062247 99.732 By MS/MS By MS/MS 1 1 14700000 7830100 6870000 3334 1320 3781 8588;8589 8404;8405 8405 2448 2 LGSFGSITR GDFLGRERLGSFGSIT GSFGSITRQQEGEASS R L G T R Q 0 1 0 0 0 0 0 2 0 1 1 0 0 1 0 2 1 0 0 0 0 0 9 0 936.50288 Q14315 Q14315 2231 2239 FLNC Filamin-C yes yes 2 0.01438 72.34 By MS/MS By MS/MS 1 1 129550000 66795000 62756000 3335 2089 3782 8590;8591 8406;8407 8407 4124 2 LGSFSTAAEELAR EELAAAAKLGSFSTAA TAAEELARRPGELARR K L G A R R 3 1 0 0 0 0 2 1 0 0 2 0 0 1 0 2 1 0 0 0 0 0 13 0 1350.6779 H0Y3A3;Q5VWQ8 H0Y3A3 781 793 DAB2IP Disabled homolog 2-interacting protein yes no 2 1.2265E-06 127.79 By MS/MS By MS/MS 1 1 7637800 3523200 4114600 3336 1116 3783 8592;8593 8408;8409 8409 2110 2 LGSGGSGDGPSVSWSR MKQQQRNRLGSGGSGD GPSVSWSRQTQPPAAL R L G S R Q 0 1 0 1 0 0 0 5 0 0 1 0 0 0 1 5 0 1 0 1 0 0 16 0 1504.6906 Q9Y6R9 Q9Y6R9 371 386 CCDC61 Coiled-coil domain-containing protein 61 yes yes 2 0.0045387 74.147 By MS/MS 1 4982400 0 4982400 3337 3152 3784 8594 8410 8410 6742;6743 1 LGSGSNGLLR EEVSARLRLGSGSNGL SGSNGLLRRKVSIIET R L G L R R 0 1 1 0 0 0 0 3 0 0 3 0 0 0 0 2 0 0 0 0 0 0 10 0 972.53524 H7C1A0;Q9HC62 H7C1A0 38 47 SENP2 Sentrin-specific protease 2 yes no 2 0.021312 59.265 By MS/MS 1 0 0 0 3338 1276 3785 8595 8411 8411 2364 1 LGSLSARSDSEATISR LAQPRRTRLGSLSARS DSEATISRSSASSRTA R L G S R S 2 2 0 1 0 0 1 1 0 1 2 0 0 0 0 5 1 0 0 0 0 0 16 1 1648.838 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1122 1137 CEP170 Centrosomal protein of 170 kDa yes no 2;3 0.0020942 89.663 By MS/MS By MS/MS 2 2 75323000 34933000 40390000 3339 1112 3786 8596;8597;8598;8599 8412;8413;8414;8415 8414 2093;2094 4 LGSLTPEIVSTPSSPEEEDK AFSGEGQKLGSLTPEI SSPEEEDKSILNAVVL K L G D K S 0 0 0 1 0 0 4 1 0 1 2 1 0 0 3 4 2 0 0 1 0 0 20 0 2114.0267 Q14CS0 Q14CS0 222 241 UBXN2B UBX domain-containing protein 2B yes yes 2 0.0069482 66.325 By MS/MS 1 12044000 0 12044000 3340 2114 3787 8600 8416 8416 4180 1 LGSLVDEFK KVEAMNKRLGSLVDEF GSLVDEFKELVYPPDY R L G F K E 0 0 0 1 0 0 1 1 0 0 2 1 0 1 0 1 0 0 0 1 0 0 9 0 1006.5335 B1AHC9;P12956 B1AHC9 468 476 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.0026237 114.28 By MS/MS By MS/MS 1 1 8377400 4870000 3507400 3341 518 3788 8601;8602 8417;8418 8418 2 LGSPDYGNSALLSLPGYRPTTR SSTQSLARLGSPDYGN PGYRPTTRSSARRSQA R L G T R S 1 2 1 1 0 0 0 3 0 0 4 0 0 0 3 3 2 0 2 0 0 0 22 1 2334.1968 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1844 1865 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0085176 53.278 By MS/MS By matching 1 1 30257000 18093000 12164000 3342 118 3789 8603;8604 8419 8419 206 1 LGSPGAPQQEDAMDDKELIEYFK ________________ KELIEYFKSQMKEDPD R L G F K S 2 0 0 3 0 2 3 2 0 1 2 2 1 1 2 1 0 0 1 0 0 0 23 1 2580.2054 H0YGG4 H0YGG4 5 27 EIF2B1 yes yes 3 0.0070617 57.045 By MS/MS By MS/MS 1 1 69196000 37933000 31263000 3343 1182 3790 8605;8606 8420;8421 8420 428 2224 2 LGSPLAVDEALR SQSDTKDRLGSPLAVD LAVDEALRRSDLVEEF R L G L R R 2 1 0 1 0 0 1 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 12 0 1239.6823 Q7RTP6 Q7RTP6 1308 1319 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 2 0.0032819 84.734 By MS/MS By MS/MS 1 1 23009000 13890000 9118700 3344 2370 3791 8607;8608 8422;8423 8423 4803 2 LGSPLAVDEALRR SQSDTKDRLGSPLAVD AVDEALRRSDLVEEFW R L G R R S 2 2 0 1 0 0 1 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 13 1 1395.7834 Q7RTP6 Q7RTP6 1308 1320 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 3 0.0046517 68.262 By MS/MS 1 2972500 0 2972500 3345 2370 3792 8609 8424 8424 4803 1 LGSPVDNLEDMDRDDLTDDSVFTR ERRRLSDRLGSPVDNL TDDSVFTRSSQCSRGL R L G T R S 0 2 1 7 0 0 1 1 0 0 3 0 1 1 1 2 2 0 0 2 0 0 24 1 2724.2185 Q5VUA4 Q5VUA4 171 194 ZNF318 Zinc finger protein 318 yes yes 3 0.00028263 75.057 By MS/MS By MS/MS 2 2 200010000 98273000 101740000 3346 2268 3793;3794 8610;8611;8612;8613 8425;8426;8427;8428;8429 8429 911 4557 5 LGSSSNLQFK NSLPSSARLGSSSNLQ SSSNLQFKAERIKIPS R L G F K A 0 0 1 0 0 1 0 1 0 0 2 1 0 1 0 3 0 0 0 0 0 0 10 0 1079.5611 A0A0J9YYG8;A0A0A0MSL1;Q8TDM6 A0A0J9YYG8 280 289 DLG5 Disks large homolog 5 yes no 2 0.0029821 91.123 By matching By MS/MS 1 1 10582000 5661600 4920500 3347 253 3795 8614;8615 8430 8430 445 1 LGSTAPQVLSTSSPAQQAENEAK AFTGEGQKLGSTAPQV QQAENEAKASSSILID K L G A K A 4 0 1 0 0 3 2 1 0 0 2 1 0 0 2 4 2 0 0 1 0 0 23 0 2313.1448 Q9UNZ2 Q9UNZ2 260 282 NSFL1C NSFL1 cofactor p47 yes yes 2 0.00078492 77.191 By matching By MS/MS 1 1 16263000 7928900 8333700 3348 3063 3796 8616;8617 8431;8432 8431 6466;6467 2 LGSTFSLDTSMSMNSSPLVGPECDHPK EPRPDVPRLGSTFSLD GPECDHPKIKPSSSAN R L G P K I 0 0 1 2 1 0 1 2 1 0 3 1 2 1 3 6 2 0 0 1 0 0 27 0 2893.2932 P22681;A0A0U1RR39;A0A1B0GW38;A0A0U1RQX8 P22681 637 663 CBL E3 ubiquitin-protein ligase CBL yes no 3 0.011787 48.489 By MS/MS 1 10385000 10385000 0 3349 1751 3797 8618 8433 8433 658;659 3305 1 LGSVDSFER GANRMRGRLGSVDSFE GSVDSFERSNSLASEK R L G E R S 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 9 0 1008.4876 Q5JU47;O60343 Q5JU47 98 106 TBC1D4 TBC1 domain family member 4 yes no 2 0.002825 93.766 By MS/MS By MS/MS 2 2 269730000 133900000 135830000 3350 1517 3798;3799 8619;8620;8621;8622 8434;8435;8436;8437;8438 8438 2863;2864 5 LGSYSGPTSVSR AEGTRRDRLGSYSGPT SGPTSVSRQRVESLRK R L G S R Q 0 1 0 0 0 0 0 2 0 0 1 0 0 0 1 4 1 0 1 1 0 0 12 0 1209.599 V9GYZ0;Q9BZ23 V9GYZ0 64 75 PANK2 Pantothenate kinase 2, mitochondrial yes no 2 0.00012315 121.45 By MS/MS By MS/MS 1 1 109850000 42458000 67396000 3351 2780 3800 8623;8624 8439;8440 8439 5784 2 LGTLNGSQEEMWQK EDSISNLKLGTLNGSQ SQEEMWQKTETVKQEN K L G Q K T 0 0 1 0 0 2 2 2 0 0 2 1 1 0 0 1 1 1 0 0 0 0 14 0 1619.7614 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6 H0YDJ4 1035 1048 NIN Ninein yes no 2 2.3545E-08 134.4 By MS/MS By MS/MS 2 2 36162000 17099000 19063000 3352 620 3801;3802 8625;8626;8627;8628 8441;8442;8443;8444 8441 241 1144 4 LGTPKSVNKAVSQSR SSEGPSQRLGTPKSVN NKAVSQSRNEMGIPQQ R L G S R N 1 1 1 0 0 1 0 1 0 0 1 2 0 0 1 3 1 0 0 2 0 0 15 2 1570.8791 Q15398 Q15398 637 651 DLGAP5 Disks large-associated protein 5 yes yes 2 0.031427 46.249 By MS/MS 1 0 0 0 3353 2137 3803 8629 8445 8445 1 LGTSESLPCTAEELSR LASGHSVRLGTSESLP CTAEELSRSTTELLPR R L G S R S 1 1 0 0 1 0 3 1 0 0 3 0 0 0 1 3 2 0 0 0 0 0 16 0 1748.8251 B4DTS2;Q9BZL6 B4DTS2 209 224 PRKD2 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2 yes no 2 0.00099371 93.495 By MS/MS By MS/MS 1 1 45243000 22074000 23169000 3354 564 3804 8630;8631 8446;8447 8446 1044 2 LGVSVSPSR RSKSPKKKLGVSVSPS GVSVSPSRARRRRKTS K L G S R A 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 3 0 0 0 2 0 0 9 0 900.50288 E7ERS3;Q86VM9;H3BP01 E7ERS3 553 561 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.00056075 149.33 By MS/MS By MS/MS 2 2 485250000 244210000 241040000 3355 811 3805;3806 8632;8633;8634;8635 8448;8449;8450;8451;8452;8453 8449 1465;1466;1467 6 LGYLVSPPQQIR PGWEHSNKLGYLVSPP VSPPQQIRRGERSCYR K L G I R R 0 1 0 0 0 2 0 1 0 1 2 0 0 0 2 1 0 0 1 1 0 0 12 0 1369.7718 Q7Z6E9;H3BSK8 Q7Z6E9 511 522 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2 0.00061633 108.32 By MS/MS By MS/MS 1 1 18498000 8755500 9742400 3356 2393 3807 8636;8637 8454;8455;8456;8457;8458 8455 4877 5 LHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALR EEIAFLKKLHEEEIQE PDLTAALRDVRQQYES K L H L R D 3 1 0 3 0 6 5 0 2 3 4 1 0 0 1 1 1 0 0 3 0 0 34 1 3922.0072 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 237 270 VIM Vimentin yes no 4;5 2.9458E-15 111.09 By MS/MS By MS/MS 2 2 74372000 45271000 29102000 3357 1663 3808 8638;8639;8640;8641 8459;8460;8461 8460 3 LHFFMPGFAPLTSR VNMVPFPRLHFFMPGF GFAPLTSRGSQQYRAL R L H S R G 1 1 0 0 0 0 0 1 1 0 2 0 1 3 2 1 1 0 0 0 0 0 14 0 1619.8283 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;K7ESM5;A0A075B736;Q5SQY0;A6NNZ2;Q9BUF5;P68371;P04350;Q3ZCM7 Q5JP53 245 258 TUBB;TUBB2B;TUBB2A;TUBB6;TUBB8;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain no no 3 0.00027376 100.02 By MS/MS By MS/MS 1 1 6311200 3712300 2598900 3358 1653;1958 3809 8642;8643 8462;8463 8462 608 2 LHLETPQPSPQEGGSVDIWR QAPPKPPRLHLETPQP GGSVDIWRIPETGSPN R L H W R I 0 1 0 1 0 2 2 2 1 1 2 0 0 0 3 2 1 1 0 1 0 0 20 0 2245.1127 O14613 O14613 133 152 CDC42EP2 Cdc42 effector protein 2 yes yes 3 0.021267 56.719 By matching By MS/MS 1 1 10451000 4516300 5934900 3359 1450 3810 8644;8645 8464 8464 2674 0 LHPDGSPDVAGEK RLNVKAQKLHPDGSPD SPDVAGEKGIQKIPSG K L H E K G 1 0 0 2 0 0 1 2 1 0 1 1 0 0 2 1 0 0 0 1 0 0 13 0 1320.631 Q7Z2Z1 Q7Z2Z1 594 606 TICRR Treslin yes yes 2 0.023652 63.16 By MS/MS By MS/MS 2 1 52818000 37220000 15598000 3360 2373 3811 8646;8647;8648 8465;8466 8465 4809 2 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK IPQPDLTKLHQLAMQQ ESSSPEVKGYWGLDAS K L H V K G 1 0 1 0 0 3 2 3 3 1 2 1 2 2 2 5 2 0 0 1 0 0 31 0 3381.587 Q15366;H3BRU6;F8VZX2;F8VRH0 Q15366 246 276 PCBP2 Poly(rC)-binding protein 2 yes no 4 0.00012569 62.831 By MS/MS By MS/MS 4 3 176700000 122390000 54308000 3361 2134 3812;3813;3814 8649;8650;8651;8652;8653;8654;8655 8467;8468;8469;8470;8471;8472;8473;8474;8475 8471 857;858 4230;4231;4232 8 LHSPGATSTAELGSR RRALEKERLHSPGATS STAELGSRGEQGVQLG R L H S R G 2 1 0 0 0 0 1 2 1 0 2 0 0 0 1 3 2 0 0 0 0 0 15 0 1482.7427 H7C0P0;Q9BV73 H7C0P0 715 729 CEP250 Centrosome-associated protein CEP250 yes no 3 0.00038727 89.992 By MS/MS By MS/MS 1 1 11108000 6039500 5068100 3362 1271 3815 8656;8657 8476;8477;8478;8479 8477 2357;7229 4 LHSSNPNLSTLDFGEEK KPFSGPVRLHSSNPNL TLDFGEEKNYSDGSET R L H E K N 0 0 2 1 0 0 2 1 1 0 3 1 0 1 1 3 1 0 0 0 0 0 17 0 1886.901 Q9H4L5 Q9H4L5 301 317 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 2;3 0.00025614 98.337 By MS/MS By MS/MS 2 2 34019000 18354000 15665000 3363 2833 3816 8658;8659;8660;8661 8480;8481;8482;8483 8483 5940;5941;5942;7853 4 LHVSTINLQK VETGPMKKLHVSTINL VSTINLQKAWGAARRV K L H Q K A 0 0 1 0 0 1 0 0 1 1 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1151.6663 P42345 P42345 1258 1267 MTOR Serine/threonine-protein kinase mTOR yes yes 3 0.0016773 95.094 By MS/MS 1 0 0 0 3364 1824 3817 8662 8484 8484 3438;7443 1 LHYTPPLQSPIIDNDPLLGQSPWR RFFMTPPRLHYTPPLQ LLGQSPWRSKISGSDT R L H W R S 0 1 1 2 0 2 0 1 1 2 4 0 0 0 5 2 1 1 1 0 0 0 24 0 2756.4286 C9J5J4;H7C4T7;H0Y322;Q5TKA1 C9J5J4 282 305 LIN9 Protein lin-9 homolog yes no 3 3.9938E-06 110.89 By MS/MS By MS/MS 1 1 45667000 25866000 19800000 3365 639 3818 8663;8664 8485;8486 8486 1194;7016 2 LIAPVAEEEATVPNNK ________________ EATVPNNKITVVGVGQ K L I N K I 3 0 2 0 0 0 3 0 0 1 1 1 0 0 2 0 1 0 0 2 0 0 16 0 1693.8887 P07195;A8MW50;C9J7H8;F5H793 P07195 8 23 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 2;3 1.9942E-14 128.88 By MS/MS By MS/MS 2 2 102150000 45222000 56927000 3366 1649 3819 8665;8666;8667;8668 8487;8488;8489;8490 8490 4 LIASNSTMER TPPSMRLKLIASNSTM ASNSTMERKFSPWIGG K L I E R K 1 1 1 0 0 0 1 0 0 1 1 0 1 0 0 2 1 0 0 0 0 0 10 0 1120.5547 O94805 O94805 377 386 ACTL6B Actin-like protein 6B yes yes 2 0.025653 46.994 By MS/MS 1 0 0 0 3367 1568 3820 8669 8491 8491 564 2970 1 LICCDILDVLDK QMVETELKLICCDILD DILDVLDKHLIPAANT K L I D K H 0 0 0 3 2 0 0 0 0 2 3 1 0 0 0 0 0 0 0 1 0 0 12 0 1475.7364 P62258;K7EIT4 P62258 95 106 YWHAE 14-3-3 protein epsilon yes no 2 8.9214E-10 143.5 By MS/MS By MS/MS 1 1 61610000 39476000 22134000 3368 1936 3821 8670;8671 8492;8493 8493 2 LIDLEDSADVGDQPGEVGYSGSPAEAPPSK LPESLMPKLIDLEDSA PAEAPPSKSPSMPSLN K L I S K S 3 0 0 4 0 1 3 4 0 1 2 1 0 0 4 4 0 0 1 2 0 0 30 0 2999.3884 Q96D71;E9PMG1;H0YDT0 Q96D71 371 400 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 3 0.0067923 48.694 By MS/MS By matching 1 1 17698000 9107100 8590900 3369 2635 3822 8672;8673 8494 8494 5417;5418 1 LIDLESPTPESQK TIEEDLKKLIDLESPT SPTPESQKSFKFHALS K L I Q K S 0 0 0 1 0 1 2 0 0 1 2 1 0 0 2 2 1 0 0 0 0 0 13 0 1455.7457 F5GYF8;O43166 F5GYF8 998 1010 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 1.0437E-57 200.76 By MS/MS By MS/MS 1 1 91669000 48781000 42888000 3370 947 3823 8674;8675 8495;8496 8495 1779 2 LIDNISSR VSSLTISRLIDNISSR LIDNISSREEIDHAEY R L I S R E 0 1 1 1 0 0 0 0 0 2 1 0 0 0 0 2 0 0 0 0 0 0 8 0 916.49779 E5RJ73;D6RJC7;D6RH20;G5EA06;Q92552 E5RJ73 75 82 MRPS27 28S ribosomal protein S27, mitochondrial yes no 2 0.011551 79.148 By MS/MS By matching 1 1 20385000 10242000 10143000 3371 765 3824 8676;8677 8497 8497 1374 0 LIDSSGSASVLTHSSSGNSLK QSGSSPKRLIDSSGSA SSSGNSLKRPDTTESL R L I L K R 1 0 1 1 0 0 0 2 1 1 3 1 0 0 0 8 1 0 0 1 0 0 21 0 2046.0229 Q96SU4 Q96SU4 311 331 OSBPL9 Oxysterol-binding protein-related protein 9 yes yes 2 0.00096703 79.695 By MS/MS By matching 1 1 14357000 7134500 7222900 3372 2713 3825 8678;8679 8498 8498 5614 1 LIEDNEYTAR IADFGLARLIEDNEYT EDNEYTAREGAKFPIK R L I A R E 1 1 1 1 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1222.583 Q573B4;J3QRU1;P06239;P12931;P06241;P07947 Q573B4 395 404 LCK;YES1;SRC;FYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lck;Proto-oncogene tyrosine-protein kinase Src;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Yes yes no 2 4.5318E-05 152.34 By MS/MS By MS/MS 1 1 559700000 319930000 239760000 3373 1355 3826 8680;8681 8499;8500 8500 8167 2 LIEEVMIGEDK LVKLGSCKLIEEVMIG EVMIGEDKLIHFSGVA K L I D K L 0 0 0 1 0 0 3 1 0 2 1 1 1 0 0 0 0 0 0 1 0 0 11 0 1274.6428 F8VQ14;F5GWF6;P78371 F8VQ14 348 358 CCT2 T-complex protein 1 subunit beta yes no 2 0.012502 80.916 By MS/MS By matching 1 1 8553300 4179000 4374300 3374 939 3827 8682;8683 8501 8501 350 1 LIETTANMNSSYVKFLK EMIKKAKKLIETTANM SSYVKFLKQATDNSEI K L I L K Q 1 0 2 0 0 0 1 0 0 1 2 2 1 1 0 2 2 0 1 1 0 0 17 1 1958.0183 P46100;A0A096LNL9;A0A096LNW1;A0A096LNN3 P46100 359 375 ATRX Transcriptional regulator ATRX yes no 2 0.030901 41.54 By MS/MS 1 0 0 0 3375 1837 3828 8684 8502 8502 701 1 LIEVDDER FPATGCQKLIEVDDER LIEVDDERKLRTFYEK K L I E R K 0 1 0 2 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 8 0 987.48729 P62753;A2A3R7 P62753 15 22 RPS6 40S ribosomal protein S6 yes no 2 0.020918 94.302 By MS/MS By matching 1 1 36725000 17232000 19493000 3376 1944 3829 8685;8686 8503 8503 1 LIGQIVSSITASLR PTYTNLNRLIGQIVSS SSITASLRFDGALNVD R L I L R F 1 1 0 0 0 1 0 1 0 3 2 0 0 0 0 3 1 0 0 1 0 0 14 0 1456.8613 Q71U36;Q6PEY2;Q13748;F8VQQ4 Q71U36 230 243 TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2 0.024043 103.08 By MS/MS 1 0 0 0 3377 2360 3830 8687 8504 8504 1 LIGTAVPQRTSPTGPK QIFNKSKKLIGTAVPQ RTSPTGPKNMQTSGRL K L I P K N 1 1 0 0 0 1 0 2 0 1 1 1 0 0 3 1 3 0 0 1 0 0 16 1 1621.9152 C9JB30;Q9UPY8 C9JB30 152 167 MAPRE3 Microtubule-associated protein RP/EB family member 3 yes no 3 0.0014441 77.506 By MS/MS By MS/MS 1 1 20023000 10623000 9400100 3378 655 3831 8688;8689 8505;8506;8507 8505 1219;7025;7026 3 LIHHGVHHGANQAGSEAGKFGQGVDNAAGQAGNEAGR QVGKEADKLIHHGVHH QAGNEAGRFGQGVHHA K L I G R F 7 1 3 1 0 3 2 9 4 1 1 1 0 1 0 1 0 0 0 2 0 0 37 1 3618.7173 Q6UWP8 Q6UWP8 133 169 SBSN Suprabasin yes yes 3 0.015258 50.583 By MS/MS 1 0 0 0 3379 2340 3832 8690 8508 8508 4728 1 LIIESPSNTSSTEPA WKELIDPRLIIESPSN NTSSTEPA________ R L I P A - 1 0 1 0 0 0 2 0 0 2 1 0 0 0 2 4 2 0 0 0 0 0 15 0 1544.757 P38432 P38432 562 576 COIL Coilin yes yes 2 0.0035895 80.469 By MS/MS By MS/MS 1 1 53638000 28765000 24873000 3380 1807 3833 8691;8692 8509;8510;8511 8509 3415 3 LIINSLYK AEVNRMMKLIINSLYK LIINSLYKNKEIFLRE K L I Y K N 0 0 1 0 0 0 0 0 0 2 2 1 0 0 0 1 0 0 1 0 0 0 8 0 962.58007 P14625;F8W026;Q96GW1 P14625 88 95 HSP90B1 Endoplasmin yes no 2 0.0087919 120.49 By MS/MS By MS/MS 1 1 6271900 3598200 2673700 3381 1701 3834 8693;8694 8512;8513;8514 8513 3 LILTDSGSAPTFCSDDEDVAPLSAK ITIQQHPRLILTDSGS DVAPLSAKFADIYPLS R L I A K F 3 0 0 4 1 0 1 1 0 1 3 1 0 1 2 4 2 0 0 1 0 0 25 0 2608.2214 E7EUR8;A0A1B0GVL4;P78312;D6RFZ4 E7EUR8 134 158 FAM193A Protein FAM193A yes no 3 0.004942 51.306 By MS/MS By matching 1 1 13122000 5512000 7610400 3382 429 3835 8695;8696 8515 8515 802 1 LINSELGSPSRTDPLDGDVQPATWR ISSRETDRLINSELGS DVQPATWRLSALPPRL R L I W R L 1 2 1 3 0 1 1 2 0 1 3 0 0 0 3 3 2 1 0 1 0 0 25 1 2723.3515 Q68CP4 Q68CP4 236 260 HGSNAT Heparan-alpha-glucosaminide N-acetyltransferase yes yes 3 0.00040745 70.994 By MS/MS By MS/MS 1 1 15878000 8107400 7770100 3383 2291 3836 8697;8698 8516;8517 8517 4613 2 LIPGPLSPVAR SKEPLKEKLIPGPLSP GPLSPVARGGSNGGSN K L I A R G 1 1 0 0 0 0 0 1 0 1 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1118.6812 P48634 P48634 1213 1223 PRRC2A Protein PRRC2A yes yes 2 0.0052874 80.69 By MS/MS By MS/MS 1 1 544460000 345060000 199390000 3384 1846 3837 8699;8700 8518;8519 8518 3544 2 LIPITGGNARSPEDQLGK EETEIHWKLIPITGGN SPEDQLGKHGEKQTPG K L I G K H 1 1 1 1 0 1 1 3 0 2 2 1 0 0 2 1 1 0 0 0 0 0 18 1 1865.0007 Q9UK61 Q9UK61 917 934 FAM208A Protein FAM208A yes yes 2 0.00053584 108.59 By MS/MS By MS/MS 1 1 50227000 23995000 26231000 3385 3019 3838 8701;8702 8520;8521;8522 8522 6357 3 LIPLDEECSMDETPYVETLEPGGSGGSPDGAGGSK PYEPIPPKLIPLDEEC PDGAGGSKLPPVLANL K L I S K L 1 0 0 3 1 0 5 7 0 1 3 1 1 0 4 4 2 0 1 1 0 0 35 0 3550.5603 Q96QC0 Q96QC0 519 553 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 3 0.0008821 54.581 By matching By MS/MS 1 1 45636000 25062000 20574000 3386 2701 3839 8703;8704 8523 8523 1074 5573 1 LIQQYKEAMSNK EEEEEKQKLIQQYKEA YKEAMSNKACRFTAVK K L I N K A 1 0 1 0 0 2 1 0 0 1 1 2 1 0 0 1 0 0 1 0 0 0 12 1 1451.7442 H3BPL3;Q13064 H3BPL3 147 158 MKRN3 Probable E3 ubiquitin-protein ligase makorin-3 yes no 2 0.027684 50.034 By MS/MS 1 0 0 0 3387 1239 3840 8705 8524 8524 447 2315 1 LIRPEYAWIVQPVSGAVYDRPGASPK LAALNCLRLIRPEYAW DRPGASPKRNHDGECT R L I P K R 3 2 0 1 0 1 1 2 0 2 1 1 0 0 4 2 0 1 2 3 0 0 26 2 2868.5286 G3V198;Q12769 G3V198 1099 1124 NUP160 Nuclear pore complex protein Nup160 yes no 3;4 5.83E-07 104.77 By MS/MS By MS/MS 2 2 645100000 267400000 377700000 3388 1061 3841 8706;8707;8708;8709 8525;8526;8527;8528;8529;8530 8529 2007 6 LIRSQMQLTTGVEYIVTVKIGWTK TYLYRVQRLIRSQMQL TVKIGWTKCKRNDTSN R L I T K C 0 1 0 0 0 2 1 2 0 3 2 2 1 0 0 1 4 1 1 3 0 0 24 2 2763.5357 Q9H114 Q9H114 67 90 CSTL1 Cystatin-like 1 yes yes 3 0.019913 40.414 By MS/MS 1 10862000 0 10862000 3389 2809 3842 8710 8531 8531 8457 1 LISELSLLNHK TKEQKTQRLISELSLL ELSLLNHKLPARVWLP R L I H K L 0 0 1 0 0 0 1 0 1 1 4 1 0 0 0 2 0 0 0 0 0 0 11 0 1265.7343 A0A0B4J1S8;Q9UBF8;F8W860;E9PL47 A0A0B4J1S8 364 374 PI4KB Phosphatidylinositol 4-kinase beta yes no 2 0.024767 59.8 By matching By MS/MS 1 1 5919600 3737100 2182500 3390 287 3843 8711;8712 8532 8532 509 0 LISPLASPADGVK SPPPIEIRLISPLASP ASPADGVKSKPRKTTE R L I V K S 2 0 0 1 0 0 0 1 0 1 2 1 0 0 2 2 0 0 0 1 0 0 13 0 1266.7184 Q8WYP5 Q8WYP5 2220 2232 AHCTF1 Protein ELYS yes yes 2 1.3865E-05 125.22 By MS/MS By MS/MS 2 2 19427000 10403000 9024200 3391 2575 3844;3845 8713;8714;8715;8716 8533;8534;8535;8536 8536 5278;5279 4 LISQIVSSITASLR PTYTNLNRLISQIVSS SSITASLRFDGALNVD R L I L R F 1 1 0 0 0 1 0 0 0 3 2 0 0 0 0 4 1 0 0 1 0 0 14 0 1486.8719 F5H5D3;Q9BQE3;F8VVB9;C9J2C0;Q9NY65;C9JDS9;Q9H853;P68363;P68366 P68363 300 313 TUBA1C;TUBA1B;TUBA8;TUBA4A;TUBA4B Tubulin alpha-1C chain;Tubulin alpha-8 chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-1B chain;Tubulin alpha-4A chain no no 2 1.0779E-06 130.44 By MS/MS 1 8532800 8532800 0 3392 976;1957 3846 8717 8537 8537 1 LISWYDNEFGYSNR ALNDHFVKLISWYDNE NEFGYSNRVVDLMAHM K L I N R V 0 1 2 1 0 0 1 1 0 1 1 0 0 1 0 2 0 1 2 0 0 0 14 0 1762.7951 P04406;E7EUT5 P04406 310 323 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 1.3881E-15 144.7 By MS/MS By MS/MS 1 1 35169000 19643000 15526000 3393 1635 3847 8718;8719 8538;8539 8538 2 LITEDVQGK EVAFRKFKLITEDVQG ITEDVQGKNCLTNFHG K L I G K N 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1001.5393 D6RAT0;P61247;D6RAS7;H0Y8L7;D6RB09;E9PFI5;D6RG13;D6RGE0;D6RED7 D6RAT0 49 57 RPS3A 40S ribosomal protein S3a yes no 2 0.031635 71.877 By matching By MS/MS 1 1 18177000 8526600 9650800 3394 744 3848 8720;8721 8540 8540 1 LITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGR ETVADTRRLITKPQNL PQTVGVGRGRFTTYEI R L I G R G 1 1 4 2 0 2 1 3 0 2 3 1 0 1 4 2 2 0 1 3 0 0 33 1 3552.8213 O60493 O60493 11 43 SNX3 Sorting nexin-3 yes yes 3 4.6928E-09 86.543 By MS/MS By MS/MS 1 1 61105000 25438000 35667000 3395 1518 3849 8722;8723 8541;8542 8542 8201 2 LIVDEAINEDNSVVSLSQPK KQKNRPNRLIVDEAIN VVSLSQPKMDELQLFR R L I P K M 1 0 2 2 0 1 2 0 0 2 2 1 0 0 1 3 0 0 0 3 0 0 20 0 2169.1165 P55072 P55072 26 45 VCP Transitional endoplasmic reticulum ATPase yes yes 2 0.0038255 91.441 By MS/MS 1 3229800 0 3229800 3396 1908 3850 8724 8543 8543 0 LIVENLSSR PPVRTEYRLIVENLSS IVENLSSRCSWQDLKD R L I S R C 0 1 1 0 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 9 0 1029.5819 Q13247;B4DJK0;B4DUA4;A0A0D9SEM4;Q08170;Q13243 Q13247 112 120 SRSF6;SRSF5;SRSF4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 5 no no 2 0.0010815 145.23 By MS/MS By MS/MS 2 2 91296000 45879000 45418000 3397 2053;2052 3851;3852 8725;8726;8727;8728 8544;8545;8546 8544 4028 3 LIYLVPEK ELQEYQNKLIYLVPEK LIYLVPEKQLLNERIK K L I E K Q 0 0 0 0 0 0 1 0 0 1 2 1 0 0 1 0 0 0 1 1 0 0 8 0 973.58482 A0A087WVF7;Q9NZM3;E7EPJ2 A0A087WVF7 561 568 ITSN2 Intersectin-2 yes no 2 0.0099659 104.21 By MS/MS 1 0 0 0 3398 77 3853 8729 8547 8547 7982 1 LKATVTPSPVK EKKMPKPRLKATVTPS TVTPSPVKGKGKVGRP R L K V K G 1 0 0 0 0 0 0 0 0 0 1 2 0 0 2 1 2 0 0 2 0 0 11 1 1139.6914 Q9H1E3 Q9H1E3 174 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 0.00053687 114.87 By MS/MS By MS/MS 1 1 32390000 18991000 13399000 3399 2816 3854 8730;8731 8548;8549 8549 5890;7847 2 LKATVTPSPVKGK EKKMPKPRLKATVTPS TPSPVKGKGKVGRPTA R L K G K G 1 0 0 0 0 0 0 1 0 0 1 3 0 0 2 1 2 0 0 2 0 0 13 2 1324.8078 Q9H1E3 Q9H1E3 174 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 0.021515 73.593 By MS/MS 1 2798800 2798800 0 3400 2816 3855 8732 8550 8550 5890;7847 1 LKDLFDYSPPLHK PEQVKSEKLKDLFDYS DYSPPLHKNLDAREKS K L K H K N 0 0 0 2 0 0 0 0 1 0 3 2 0 1 2 1 0 0 1 0 0 0 13 1 1571.8348 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 505 517 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3;4 1.6162E-14 159.64 By MS/MS By MS/MS 4 3 536170000 302070000 234100000 3401 2947 3856 8733;8734;8735;8736;8737;8738;8739 8551;8552;8553;8554;8555;8556;8557;8558;8559;8560;8561 8559 6213 11 LKDLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI KILSLKNKLKDLGHPV PGKDLDHI________ K L K H I - 0 0 0 9 0 1 9 3 2 1 4 2 0 0 2 2 0 0 0 1 0 0 36 2 4076.7254 O60763 O60763 927 962 USO1 General vesicular transport factor p115 yes yes 4 2.6284E-05 65.69 By MS/MS 1 59141000 59141000 0 3402 1526 3857 8740 8562 8562 2881 1 LKECCEKPLLEK NQDSISSKLKECCEKP CEKPLLEKSHCIAEVE K L K E K S 0 0 0 0 2 0 3 0 0 0 3 3 0 0 1 0 0 0 0 0 0 0 12 2 1545.7895 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;H0YA55;D6RHD5 B7WNR0 184 195 ALB Serum albumin yes no 4 0.0083672 58.116 By MS/MS 1 2246600 2246600 0 + 3403 314 3858 8741 8563 8563 1 LKEDILENEDEQNSPPK QQWPEEKRLKEDILEN DEQNSPPKKGKRGRPP R L K P K K 0 0 2 2 0 1 4 0 0 1 2 2 0 0 2 1 0 0 0 0 0 0 17 1 1996.9589 Q9NTI5;A9IYQ1 Q9NTI5 1270 1286 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2;3 8.296E-42 172.99 By MS/MS By MS/MS 2 2 69595000 31200000 38395000 3404 2918 3859 8742;8743;8744;8745 8564;8565;8566;8567 8564 6159 4 LKEDILENEDEQNSPPKK QQWPEEKRLKEDILEN EQNSPPKKGKRGRPPK R L K K K G 0 0 2 2 0 1 4 0 0 1 2 3 0 0 2 1 0 0 0 0 0 0 18 2 2125.0539 Q9NTI5;A9IYQ1 Q9NTI5 1270 1287 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 0.0026201 78.848 By MS/MS By MS/MS 1 1 59156000 29757000 29400000 3405 2918 3860 8746;8747 8568;8569 8568 6159 2 LKEEDMAMNAQQDNILYQTVTGLK RDMDIIMKLKEEDMAM YQTVTGLKKDLSGVQK K L K L K K 2 0 2 2 0 3 2 1 0 1 3 2 2 0 0 0 2 0 1 1 0 0 24 1 2752.3412 Q9BRS2 Q9BRS2 450 473 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 3 0.017367 42.813 By matching By MS/MS 1 1 11663000 5891200 5771400 3406 2745 3861 8748;8749 8570 8570 1091;1092 8449 1 LKETCVSGEDPTQGADLSPDEK EPAKELVKLKETCVSG ADLSPDEKVLSKPPEG K L K E K V 1 0 0 3 1 1 3 2 0 0 2 2 0 0 2 2 2 0 0 1 0 0 22 1 2375.0798 Q02952 Q02952 466 487 AKAP12 A-kinase anchor protein 12 yes yes 3 0.013064 50.14 By MS/MS 1 6130500 6130500 0 3407 1991 3862 8750 8571 8571 3823 1 LKISLGK TPTSSKQRLKISLGKV RLKISLGKVGVKEEVL R L K G K V 0 0 0 0 0 0 0 1 0 1 2 2 0 0 0 1 0 0 0 0 0 0 7 1 757.50617 P46013 P46013 1999 2005 MKI67 Antigen KI-67 yes yes 2 0.015321 88.177 By MS/MS 1 0 0 0 3408 1833 3863 8751 8572 8572 3465 1 LKLSPSPSSR LLEGEEERLKLSPSPS LSPSPSSRVTVSRASS R L K S R V 0 1 0 0 0 0 0 0 0 0 2 1 0 0 2 4 0 0 0 0 0 0 10 1 1070.6084 Q03252;P20700 P20700 388 397 LMNB2;LMNB1 Lamin-B2;Lamin-B1 no no 2 0.0067784 97.452 By MS/MS By matching 1 1 217640000 124920000 92724000 3409 1739;1995 3864 8752;8753 8573 8573 3276 1 LKNDMAVPTPPPPPVPPTK KCEIALEKLKNDMAVP PPPVPPTKQQYLCQPL K L K T K Q 1 0 1 1 0 0 0 0 0 0 1 2 1 0 8 0 2 0 0 2 0 0 19 1 1995.0863 G3V1P5;Q96RN5 G3V1P5 529 547 MED15 Mediator of RNA polymerase II transcription subunit 15 yes no 3 0.021628 52.321 By MS/MS 1 5908900 5908900 0 3410 1065 3865 8754 8574 8574 382 0 LKNGFPHPEPDCNPSEAASEESNSEIEQEIPVEQK ETREKSPKLKNGFPHP QEIPVEQKEGAFSNFP K L K Q K E 2 0 3 1 1 2 8 1 1 2 1 2 0 1 5 4 0 0 0 1 0 0 35 1 3934.7803 Q9NR30 Q9NR30 150 184 DDX21 Nucleolar RNA helicase 2 yes yes 3;4 0.00052895 55.09 By MS/MS By MS/MS 1 2 291900000 80671000 211230000 3411 2905 3866 8755;8756;8757 8575;8576;8577 8577 135 6119;6120;6121;6122 3 LKPGGVGAPSSSSPSPSPSAR RQLEEEQKLKPGGVGA PSPSPSARPGPPPSEE K L K A R P 2 1 0 0 0 0 0 3 0 0 1 1 0 0 5 7 0 0 0 1 0 0 21 1 1921.9858 Q92797 Q92797 1159 1179 SYMPK Symplekin yes yes 2;3 0.0001458 98.76 By MS/MS By MS/MS 5 4 213780000 130570000 83206000 3412 2603 3867;3868 8758;8759;8760;8761;8762;8763;8764;8765;8766 8578;8579;8580;8581;8582;8583;8584;8585 8582 5345;5346;5347;5348;5349;5350 8 LKQLEMENSPLLSPR TLKDTSEKLKQLEMEN NSPLLSPRSNIDVNIN K L K P R S 0 1 1 0 0 1 2 0 0 0 4 1 1 0 2 2 0 0 0 0 0 0 15 1 1753.9397 Q9HCM4 Q9HCM4 509 523 EPB41L5 Band 4.1-like protein 5 yes yes 2 0.031376 45.915 By MS/MS 1 0 0 0 3413 2878 3869 8767 8586 8586 1140 1 LKSEDGVEGDLGETQSR YTTKIKPRLKSEDGVE DLGETQSRTITVTRRV R L K S R T 0 1 0 2 0 1 3 3 0 0 2 1 0 0 0 2 1 0 0 1 0 0 17 1 1818.8595 Q09666 Q09666 133 149 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0020523 92.096 By MS/MS By MS/MS 1 1 18141000 8984300 9156800 3414 2020 3870 8768;8769 8587;8588 8587 3915 2 LKSLALDIDR SLASKVTRLKSLALDI SLALDIDRDAEDQNRY R L K D R D 1 1 0 2 0 0 0 0 0 1 3 1 0 0 0 1 0 0 0 0 0 0 10 1 1142.6659 H7BXT7;A0A0C4DH16;B8ZZS0;Q9NYM9;E9PQJ6 H7BXT7 35 44 BET1L BET1-like protein yes no 2 0.018201 75.479 By MS/MS By matching 1 1 9035900 5255300 3780500 3415 330 3871 8770;8771 8589 8589 584 1 LKSLNANTDITSLAR KECQKIIRLKSLNANT TDITSLARKVVEECKL R L K A R K 2 1 2 1 0 0 0 0 0 1 3 1 0 0 0 2 2 0 0 0 0 0 15 1 1615.8893 Q92845 Q92845 58 72 KIFAP3 Kinesin-associated protein 3 yes yes 2 0.0058949 82.349 By matching By MS/MS 1 1 13076000 6343000 6732900 3416 2605 3872 8772;8773 8590 8590 5355 1 LKSSTSFANIQENSN RKLILPKRLKSSTSFA ANIQENSN________ R L K S N - 1 0 3 0 0 1 1 0 0 1 1 1 0 1 0 4 1 0 0 0 0 0 15 1 1638.7849 Q86WC4 Q86WC4 320 334 OSTM1 Osteopetrosis-associated transmembrane protein 1 yes yes 2 0.016144 105.14 By MS/MS 1 13113000 13113000 0 3417 2411 3873 8774 8591 8591 4915;4916;4917;7700 1 LKSVEDEMDSPGEEPFYTGQGR SSTSSTKRLKSVEDEM PFYTGQGRSPGSGSQS R L K G R S 0 1 0 2 0 1 4 3 0 0 1 1 1 1 2 2 1 0 1 1 0 0 22 1 2470.0958 B1AKN5;B1AKN8;Q12857;S4R3W2;B1AKN7 B1AKN5 256 277 NFIA Nuclear factor 1;Nuclear factor 1 A-type yes no 2;3 0.001809 68.189 By MS/MS By MS/MS 4 3 126520000 73688000 52836000 3418 522 3874;3875 8775;8776;8777;8778;8779;8780;8781 8592;8593;8594;8595 8595 206 979;980 4 LKTPGVDAPSWLEEQ TLKQFHIKLKTPGVDA APSWLEEQ________ K L K E Q - 1 0 0 1 0 1 2 1 0 0 2 1 0 0 2 1 1 1 0 1 0 0 15 1 1668.8359 P53367 P53367 359 373 ARFIP1 Arfaptin-1 yes yes 2 1.2808E-19 156 By MS/MS By MS/MS 1 1 30263000 16963000 13300000 3419 1894 3876 8782;8783 8596;8597 8596 7487 2 LKVPPAINQFTQALDR QRAILYKRLKVPPAIN QFTQALDRQTATQLLK R L K D R Q 2 1 1 1 0 2 0 0 0 1 2 1 0 1 2 0 1 0 0 1 0 0 16 1 1810.0101 Q5T8U3;P62424 Q5T8U3 101 116 RPL7A 60S ribosomal protein L7a yes no 3 0.0031311 85.28 By MS/MS 1 5706800 5706800 0 3420 1942 3877 8784 8598 8598 1 LLAGLDSIER RSFHVFYKLLAGLDSI AGLDSIERERLSLQGP K L L E R E 1 1 0 1 0 0 1 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1085.6081 A0A0J9YW50;A0A0J9YY01 A0A0J9YW50 855 864 yes no 2 0.022798 62.466 By MS/MS 1 9653800 9653800 0 3421 368 3878 8785 8599 8599 676 1 LLAQAEGEPCYIR RVPVCHLRLLAQAEGE EGEPCYIRDSGVAPTD R L L I R D 2 1 0 0 1 1 2 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 13 0 1518.7501 H0YE41;E9PPF2;E9PM19;P29597 H0YE41 61 73 TYK2 Tyrosine-protein kinase;Non-receptor tyrosine-protein kinase TYK2 yes no 2 0.00070928 115.78 By MS/MS By MS/MS 1 1 99753000 51170000 48583000 3422 908 3879 8786;8787 8600;8601 8600 8131 2 LLASSPALPSSGAQAR GPPVGEPRLLASSPAL PSSGAQARLTRAPGPP R L L A R L 4 1 0 0 0 1 0 1 0 0 3 0 0 0 2 4 0 0 0 0 0 0 16 0 1524.826 Q9NYZ3 Q9NYZ3 164 179 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.0025796 81.992 By MS/MS By MS/MS 1 1 30204000 15217000 14987000 3423 2952 3880 8788;8789 8602;8603 8602 6222;6223 2 LLCGLLAER AQNRSYSKLLCGLLAE LCGLLAERLRISPDRV K L L E R L 1 1 0 0 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 9 0 1043.5798 P14174 P14174 79 87 MIF Macrophage migration inhibitory factor yes yes 2 0.0087875 107.01 By MS/MS By MS/MS 1 1 47507000 19374000 28133000 3424 1699 3881 8790;8791 8604;8605 8605 2 LLDAVDTYIPVPAR LGLKSVQKLLDAVDTY TYIPVPARDLEKPFLL K L L A R D 2 1 0 2 0 0 0 0 0 1 2 0 0 0 2 0 1 0 1 2 0 0 14 0 1541.8453 P49411 P49411 239 252 TUFM Elongation factor Tu, mitochondrial yes yes 2 7.5769E-07 131.83 By MS/MS By MS/MS 1 1 7359700 5057500 2302300 3425 1852 3882 8792;8793 8606;8607;8608 8606 3 LLDEEEATDNDLR EILDESLRLLDEEEAT EATDNDLRAKFKERWQ R L L L R A 1 1 1 3 0 0 3 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 13 0 1531.7002 Q8WUM4 Q8WUM4 457 469 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 2.0037E-07 134.57 By MS/MS By MS/MS 1 1 11558000 6906200 4652200 3426 2556 3883 8794;8795 8609;8610 8609 2 LLDESESAASSR GVTDYMDRLLDESESA SESAASSRAPSPPPTA R L L S R A 2 1 0 1 0 0 2 0 0 0 2 0 0 0 0 4 0 0 0 0 0 0 12 0 1263.5943 Q8N108 Q8N108 363 374 MIER1 Mesoderm induction early response protein 1 yes yes 2 0.0080944 76.24 By MS/MS By matching 1 1 5832100 3617400 2214700 3427 2455 3884 8796;8797 8611 8611 5014 1 LLDEVFFSEK AERRNIHKLLDEVFFS DEVFFSEKIYKLNEDM K L L E K I 0 0 0 1 0 0 2 0 0 0 2 1 0 2 0 1 0 0 0 1 0 0 10 0 1225.6231 H0YLS6;H0YLC2;H0YKT8;H0YMI6;H0YMA1;H0YMZ1;H0YN18;H0YL69;P25789 H0YLS6 55 64 PSMA4 Proteasome subunit alpha type;Proteasome subunit beta type;Proteasome subunit alpha type-4 yes no 2 0.0066102 92.051 By MS/MS 1 2716600 2716600 0 3428 1207 3885 8798 8612 8612 1 LLDFGSLSNLQVTQPTVGMNFK PDTKEMLKLLDFGSLS PTVGMNFKTPRGPV__ K L L F K T 0 0 2 1 0 2 0 2 0 0 4 1 1 2 1 2 2 0 0 2 0 0 22 0 2408.241 P08708 P08708 108 129 RPS17 40S ribosomal protein S17 yes yes 2;3 2.0153E-106 211.11 By MS/MS By MS/MS 3 3 282330000 155650000 126680000 3429 1664 3886;3887 8799;8800;8801;8802;8803;8804 8613;8614;8615;8616;8617;8618 8618 615 3140 6 LLDQCDLSTSR PTEEELLKLLDQCDLS QCDLSTSRCATPNISP K L L S R C 0 1 0 2 1 1 0 0 0 0 3 0 0 0 0 2 1 0 0 0 0 0 11 0 1306.6187 Q9Y597 Q9Y597 595 605 KCTD3 BTB/POZ domain-containing protein KCTD3 yes yes 2 0.019049 65.956 By MS/MS By MS/MS 1 1 11775000 6883300 4891700 3430 3125 3888 8805;8806 8619;8620 8620 6695 2 LLDQIVEK ESVQSAKRLLDQIVEK LLDQIVEKGRPAPGFH R L L E K G 0 0 0 1 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 0 8 0 956.55425 Q96AE4;C9JSZ1;E9PEB5 Q96AE4 163 170 FUBP1 Far upstream element-binding protein 1 yes no 2 0.020309 95.741 By MS/MS 1 1786500 0 1786500 3431 2620 3889 8807 8621 8621 1 LLEAQSLMPCSPK LLQAQIQRLLEAQSLM SLMPCSPKTTAVEDTV R L L P K T 1 0 0 0 1 1 1 0 0 0 3 1 1 0 2 2 0 0 0 0 0 0 13 0 1472.7367 H0Y702;Q5T0C7;A0A0A0MR87;E9PSF2;Q15468 H0Y702 83 95 STIL SCL-interrupting locus protein yes no 2 0.0048848 68.132 By MS/MS 1 5056200 0 5056200 3432 201 3890 8808 8622 8622 85 360 1 LLEDSDSEDEAAPSPLQPALRPNPTAILDEAPKPK LEEARKRRLLEDSDSE LDEAPKPKRKVEVWEQ R L L P K R 5 1 1 4 0 1 4 0 0 1 5 2 0 0 7 3 1 0 0 0 0 0 35 2 3723.8843 Q9BW85 Q9BW85 207 241 CCDC94 Coiled-coil domain-containing protein 94 yes yes 3;4 4.1275E-05 67.367 By MS/MS By MS/MS 2 2 304260000 136240000 168010000 3433 2761 3891 8809;8810;8811;8812 8623;8624;8625 8623 5752;5753 3 LLEDSEESSEETVSR LEKNRSYRLLEDSEES SSEETVSRAGSSLQKK R L L S R A 0 1 0 1 0 0 5 0 0 0 2 0 0 0 0 4 1 0 0 1 0 0 15 0 1708.7639 A2AB15;A0A140T947;O60231 A2AB15 39 53 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 2;3 1.3799E-21 160.63 By MS/MS By MS/MS 1 2 187700000 0 187700000 3434 405 3892;3893 8813;8814;8815 8626;8627;8628;8629 8627 747;748 4 LLEELEEGQK VKVPRNFRLLEELEEG EELEEGQKGVGDGTVS R L L Q K G 0 0 0 0 0 1 4 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 10 0 1186.6081 E5RIF1;D6RG00;H0YBX6;I3L0A0;Q15819;Q13404 E5RIF1 10 19 UBE2V2;UBE2V1;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 2;Ubiquitin-conjugating enzyme E2 variant 1 yes no 2 0.0014775 132.76 By MS/MS By MS/MS 1 1 12663000 5541900 7120700 3435 762 3894 8816;8817 8630;8631;8632 8630 3 LLELKSPTELMK HSNVHSDRLLELKSPT KSPTELMKSKERSDVE R L L M K S 0 0 0 0 0 0 2 0 0 0 4 2 1 0 1 1 1 0 0 0 0 0 12 1 1400.7949 Q5VT06;H0Y7F7 Q5VT06 2455 2466 CEP350 Centrosome-associated protein 350 yes no 2 1.6842E-09 142.1 By MS/MS By MS/MS 2 2 31773000 16744000 15029000 3436 2263 3895;3896 8818;8819;8820;8821 8633;8634;8635;8636 8636 904 4531;7649 4 LLEPVLLLGK KRGNGLIKLLEPVLLL EPVLLLGKERFAGVDI K L L G K E 0 0 0 0 0 0 1 1 0 0 5 1 0 0 1 0 0 0 0 1 0 0 10 0 1093.7111 M0R210;A0A087WZ27;P62249;M0QX76;M0R1M5;M0R3H0;Q6IPX4 M0R210 34 43 RPS16;ZNF90 40S ribosomal protein S16 yes no 2 0.0011452 125.31 By MS/MS 1 0 0 0 3437 135 3897 8822 8637 8637 1 LLEQEALMEQQDPKSPSHK QEQALMEKLLEQEALM DPKSPSHKSKRQQQEL K L L H K S 1 0 0 1 0 3 3 0 1 0 3 2 1 0 2 2 0 0 0 0 0 0 19 1 2207.0892 Q96PY5;C9IZY8 Q96PY5 1002 1020 FMNL2 Formin-like protein 2 yes no 3 0.0016877 73.953 By matching By MS/MS 1 1 25832000 12250000 13582000 3438 2698 3898 8823;8824 8638 8638 1073 5567 1 LLEQYKEESK LQKEEAQKLLEQYKEE EQYKEESKKALPPEKK K L L S K K 0 0 0 0 0 1 3 0 0 0 2 2 0 0 0 1 0 0 1 0 0 0 10 1 1265.6503 Q00839 Q00839 665 674 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3 0.012273 66.19 By MS/MS 1 0 0 0 3439 1976 3899 8825 8639 8639 1 LLESETNGIQRSR L L S R 0 2 1 0 0 1 2 1 0 1 2 0 0 0 0 2 1 0 0 0 0 0 13 1 1501.7849 REV__Q8TB36 yes yes 2 0.015677 57.794 By MS/MS 1 18799000 0 18799000 + 3440 3219 3900 8826 8640 8640 6814;6815;7968 0 LLGDSDSEEEQK KQKSQAKRLLGDSDSE SDSEEEQKEAASSGDD R L L Q K E 0 0 0 2 0 1 3 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1348.5994 Q9BW71 Q9BW71 285 296 HIRIP3 HIRA-interacting protein 3 yes yes 2 3.6318E-07 133.04 By MS/MS By MS/MS 1 1 40625000 16985000 23640000 3441 2760 3901 8827;8828 8641;8642;8643;8644 8644 5748;5749 4 LLGGLAVR QAESLRYKLLGGLAVR LLGGLAVRRACYGVLR K L L V R R 1 1 0 0 0 0 0 2 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 797.51232 E9PL09;P23396;F2Z2S8;H0YF32;H0YCJ7 E9PL09 97 104 RPS3 40S ribosomal protein S3 yes no 2 0.031852 89.673 By MS/MS 1 0 0 0 3442 899 3902 8829 8645 8645 1 LLGTYVAMSLR PGADRRLRLLGTYVAM TYVAMSLRPAAGAWER R L L L R P 1 1 0 0 0 0 0 1 0 0 3 0 1 0 0 1 1 0 1 1 0 0 11 0 1222.6744 J3QQK8;E7EP17;Q9NYC9 J3QQK8 27 37 DNAH9 Dynein heavy chain 9, axonemal yes no 2 0.025246 50.786 By MS/MS 1 0 0 0 3443 797 3903 8830 8646 8646 296 1423 1 LLHMDSDDEIPIR EERRLQERLLHMDSDD SDDEIPIRKKERNPMD R L L I R K 0 1 0 3 0 0 1 0 1 2 2 0 1 0 1 1 0 0 0 0 0 0 13 0 1552.7555 Q1MSJ5 Q1MSJ5 961 973 CSPP1 Centrosome and spindle pole-associated protein 1 yes yes 3 0.016799 51.888 By MS/MS 1 3155700 3155700 0 3444 2173 3904 8831 8647 8647 871 4321 1 LLHTCQYIVPR QNSMACKRLLHTCQYI TCQYIVPRCSVSTVSF R L L P R C 0 1 0 0 1 1 0 0 1 1 2 0 0 0 1 0 1 0 1 1 0 0 11 0 1398.7442 F8W1Y6;F8VV63;Q96LP6 F8W1Y6 101 111 C12orf42 Uncharacterized protein C12orf42 yes no 2 0.010617 83.397 By matching By MS/MS 1 1 8759600 3205900 5553800 3445 1014 3905 8832;8833 8648 8648 7153 0 LLIDPNCSGHSPR KGSFSKGRLLIDPNCS NCSGHSPRTARHAPAV R L L P R T 0 1 1 1 1 0 0 1 1 1 2 0 0 0 2 2 0 0 0 0 0 0 13 0 1464.7143 Q8WYQ5;C9JSD5 Q8WYQ5 85 97 DGCR8 Microprocessor complex subunit DGCR8 yes no 2;3 0.0046158 66.498 By MS/MS By MS/MS 2 2 32338000 17364000 14974000 3446 2576 3906 8834;8835;8836;8837 8649;8650;8651 8650 5287 3 LLIEMEQR QMVVDGVKLLIEMEQR LLIEMEQRLEQGQAID K L L Q R L 0 1 0 0 0 1 2 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 8 0 1030.5481 P12277;H0YJG0 P12277 359 366 CKB Creatine kinase B-type yes no 2 0.018637 100.45 By MS/MS By MS/MS 1 1 11794000 7092600 4701200 3447 1687 3907 8838;8839 8652;8653 8652 2 LLIVQDASER QEAEEENRLLIVQDAS IVQDASERAALIPGGL R L L E R A 1 1 0 1 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1142.6295 C9JPX5;C9JKL2;O95772 C9JPX5 186 195 STARD3NL MLN64 N-terminal domain homolog yes no 2 0.0036405 98.156 By matching By MS/MS 1 1 14136000 6972400 7163700 3448 672 3908 8840;8841 8654 8654 1242 1 LLKAITYAKGFGML SKEKLKERLLKAITYA YAKGFGML________ R L L M L - 2 0 0 0 0 0 0 2 0 1 3 2 1 1 0 0 1 0 1 0 0 0 14 2 1524.8738 A0A1B0GTB3;A0A0D9SG63;S4R306;Q05086 A0A1B0GTB3 38 51 UBE3A Ubiquitin-protein ligase E3A yes no 2 0.028741 49.298 By MS/MS By matching 1 1 11110000 5746200 5364000 3449 346 3909 8842;8843 8655 8655 137 0 LLKPGEEPSEYTDEEDTK EKYDYVGRLLKPGEEP YTDEEDTKDHNKQD__ R L L T K D 0 0 0 2 0 0 5 1 0 0 2 2 0 0 2 1 2 0 1 0 0 0 18 1 2078.9532 O15173;D3DNX8;U3KQM0 O15173 200 217 PGRMC2 Membrane-associated progesterone receptor component 2 yes no 2;3 5.6978E-07 132.36 By MS/MS By MS/MS 2 2 252210000 81915000 170290000 3450 1475 3910 8844;8845;8846;8847 8656;8657;8658;8659 8659 2760;7303;7304 4 LLLAEDSEEEVDFLSER QGETQPQRLLLAEDSE EVDFLSERRMVKKSRT R L L E R R 1 1 0 2 0 0 5 0 0 0 4 0 0 1 0 2 0 0 0 1 0 0 17 0 1992.9528 Q14676 Q14676 162 178 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 7.5522E-23 157.84 By MS/MS By MS/MS 2 3 31407000 15119000 16289000 3451 2098 3911 8848;8849;8850;8851;8852 8660;8661;8662;8663;8664 8660 4144 5 LLLDIPLQTPHKLVDTGR QKFEECQRLLLDIPLQ HKLVDTGRAAKLIQRA R L L G R A 0 1 0 2 0 1 0 1 1 1 5 1 0 0 2 0 2 0 0 1 0 0 18 1 2028.1732 P49792;J3KNE0;A6NKT7;F8VYC4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792 2145 2162 RANBP2;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 no no 3 0.0013696 77.562 By MS/MS 1 6399400 6399400 0 3452 1860;1455 3912 8853 8665;8666 8666 7290 2 LLLDPSSPPTK DQDREERKLLLDPSSP DPSSPPTKALNGAEPN K L L T K A 0 0 0 1 0 0 0 0 0 0 3 1 0 0 3 2 1 0 0 0 0 0 11 0 1166.6547 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 21 31 LAMTOR1 Ragulator complex protein LAMTOR1 yes no 2 4.6432E-05 123.26 By MS/MS By MS/MS 1 1 15080000 7736900 7343600 3453 943 3913 8854;8855 8667;8668;8669;8670;8671 8671 1770 5 LLLERPSPIR SDNDRSSRLLLERPSP LERPSPIRDRRGSLEK R L L I R D 0 2 0 0 0 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 10 1 1192.7292 A0A087WWP4;Q96T37 A0A087WWP4 650 659 RBM15 Putative RNA-binding protein 15 yes no 3 0.0064391 65.347 By MS/MS By MS/MS 1 1 37972000 20063000 17909000 3454 94 3914 8856;8857 8672;8673;8674 8674 170 3 LLLERPSPIRDR SDNDRSSRLLLERPSP RPSPIRDRRGSLEKSQ R L L D R R 0 3 0 1 0 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 12 2 1463.8572 A0A087WWP4;Q96T37 A0A087WWP4 650 661 RBM15 Putative RNA-binding protein 15 yes no 3 0.0094368 75.566 By MS/MS By matching 1 1 75922000 74581000 1340700 3455 94 3915 8858;8859 8675 8675 170 1 LLLGSPSSLSPFSK ASGGLSKKLLLGSPSS SSLSPFSKRIKLEKEF K L L S K R 0 0 0 0 0 0 0 1 0 0 4 1 0 1 2 5 0 0 0 0 0 0 14 0 1431.7973 Q9H165 Q9H165 621 634 BCL11A B-cell lymphoma/leukemia 11A yes yes 2 2.0578E-07 132.15 By MS/MS By MS/MS 1 2 17226000 7249200 9977000 3456 2813 3916;3917 8860;8861;8862 8676;8677;8678 8676 5881;5882 3 LLLPGELAK REVQTAVRLLLPGELA LLPGELAKHAVSEGTK R L L A K H 1 0 0 0 0 0 1 1 0 0 4 1 0 0 1 0 0 0 0 0 0 0 9 0 952.59572 U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q96A08;Q8N257;Q16778;P33778;P23527;P06899 Q8N257 101 109 HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST1H2BA;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 1-A;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J no no 2 0.0089052 106.36 By MS/MS By MS/MS 1 1 211270000 101380000 109890000 3457 1648;1528 3918 8863;8864 8679;8680;8681 8681 3 LLLQVQHASK VAPIERVKLLLQVQHA LQVQHASKQIAADKQY K L L S K Q 1 0 0 0 0 2 0 0 1 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1135.6713 P12236;P05141;P12235;V9GYG0 P12236 34 43 SLC25A6;SLC25A5;SLC25A4 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1 yes no 3 0.0029976 90.149 By MS/MS 1 0 0 0 3458 1639 3919 8865 8682 8682 1 LLLTAQQMLQDSKTK NGSTKDRKLLLTAQQM MLQDSKTKIDIIRMQL K L L T K I 1 0 0 1 0 3 0 0 0 0 4 2 1 0 0 1 2 0 0 0 0 0 15 1 1716.9444 Q16512;K7EKY9;K7EM57 Q16512 162 176 PKN1 Serine/threonine-protein kinase N1 yes no 2 0.031541 54.343 By MS/MS 1 0 0 0 3459 2162 3920 8866 8683 8683 1 LLNLQDSDSEECTSR RLQCFQPRLLNLQDSD DSEECTSRKPGQTVNN R L L S R K 0 1 1 2 1 1 2 0 0 0 3 0 0 0 0 3 1 0 0 0 0 0 15 0 1765.7789 Q52LR7 Q52LR7 532 546 EPC2 Enhancer of polycomb homolog 2 yes yes 2 7.5351E-07 127.05 By MS/MS By MS/MS 1 1 35934000 16961000 18973000 3460 2198 3921 8867;8868 8684;8685 8684 4397 2 LLNNWDVCADMVGTFTDTEDPAKFK ATAKGRVRLLNNWDVC TEDPAKFKMKYWGVAS R L L F K M 2 0 2 4 1 0 1 1 0 0 2 2 1 2 1 0 3 1 0 2 0 0 25 1 2886.3204 Q5VY30;P02753 Q5VY30 79 103 RBP4 Retinol-binding protein 4;Plasma retinol-binding protein(1-182);Plasma retinol-binding protein(1-181);Plasma retinol-binding protein(1-179);Plasma retinol-binding protein(1-176) yes no 3 0.024032 40.994 By MS/MS 1 10174000 0 10174000 3461 1632 3922 8869 8686 8686 585 1 LLNSTNREDEDTPPNSPNVDLGK EQTLETFKLLNSTNRE SPNVDLGKRAPTPIRE K L L G K R 0 1 4 3 0 0 2 1 0 0 3 1 0 0 3 2 2 0 0 1 0 0 23 1 2524.2041 P98174 P98174 700 722 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 3 0.020939 62.848 By MS/MS 1 8607400 8607400 0 3462 1971 3923 8870 8687 8687 3771 1 LLPEGEETLESDDEKDEHTSK PQNAKKARLLPEGEET EKDEHTSKKRKVEPGE R L L S K K 0 0 0 3 0 0 6 1 1 0 3 2 0 0 1 2 2 0 0 0 0 0 21 1 2400.0816 Q8N6N3 Q8N6N3 148 168 C1orf52 UPF0690 protein C1orf52 yes yes 3;4 0.010495 52.666 By MS/MS By matching 2 1 361340000 272790000 88547000 3463 2481 3924 8871;8872;8873 8688;8689 8688 5070 2 LLPPASP LLQRLKNRLLPPASP_ RLLPPASP________ R L L S P - 1 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 0 0 0 0 0 0 7 0 693.40613 Q9Y4R8 Q9Y4R8 831 837 TELO2 Telomere length regulation protein TEL2 homolog yes yes 1;2 0.016685 108.09 By MS/MS By MS/MS 3 5 65147000 18722000 46425000 3464 3122 3925 8874;8875;8876;8877;8878;8879;8880;8881 8690;8691;8692;8693;8694;8695;8696;8697 8692 6689 8 LLPQLTYLDGYDR DYRENVFKLLPQLTYL TYLDGYDRDDKEAPDS K L L D R D 0 1 0 2 0 1 0 1 0 0 4 0 0 0 1 0 1 0 2 0 0 0 13 0 1565.809 H0YN26;P39687;Q92688 H0YN26 138 150 ANP32A;ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member B yes no 2 6.9641E-11 144.7 By MS/MS By MS/MS 1 1 78121000 41256000 36865000 3465 1217 3926 8882;8883 8698;8699 8698 2 LLPQLTYLDGYDRDDK DYRENVFKLLPQLTYL DGYDRDDKEAPDSDAE K L L D K E 0 1 0 4 0 1 0 1 0 0 4 1 0 0 1 0 1 0 2 0 0 0 16 1 1923.9578 H0YN26;P39687 H0YN26 138 153 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 3 0.0066724 73.834 By MS/MS By MS/MS 1 1 10098000 6711500 3386000 3466 1217 3927 8884;8885 8700;8701 8701 1 LLPSAPQTLPDGPLASPAR EHSSPSVRLLPSAPQT GPLASPARVPMFPVPL R L L A R V 3 1 0 1 0 1 0 1 0 0 4 0 0 0 5 2 1 0 0 0 0 0 19 0 1900.0418 F1T0I1;J3KNL6;O15027;X6RGP5;A0A0C4DH09 F1T0I1 1949 1967 SEC16A Protein transport protein Sec16A yes no 2;3 5.9513E-05 123.83 By MS/MS By MS/MS 2 2 150670000 94481000 56186000 3467 930 3928 8886;8887;8888;8889 8702;8703;8704;8705;8706 8702 1740 5 LLPYPTLASPASD WVSRGPDKLLPYPTLA TLASPASD________ K L L S D - 2 0 0 1 0 0 0 0 0 0 3 0 0 0 3 2 1 0 1 0 0 0 13 0 1343.6973 P0C1Z6 P0C1Z6 241 253 TFPT TCF3 fusion partner yes yes 2 2.2363E-08 134.99 By MS/MS By MS/MS 6 3 19548000 16277000 3271700 3468 1667 3929;3930 8890;8891;8892;8893;8894;8895;8896;8897;8898 8707;8708;8709;8710;8711;8712;8713;8714;8715;8716 8708 3145;3146 9 LLQAFLER GNIPALVRLLQAFLER LLQAFLERGSNTIASA R L L E R G 1 1 0 0 0 1 1 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 8 0 988.57057 P55060 P55060 707 714 CSE1L Exportin-2 yes yes 2 0.021344 96.492 By MS/MS 1 0 0 0 3469 1907 3931 8899 8717 8717 1 LLQDFFNGK TRIPKIQKLLQDFFNG LQDFFNGKELNKSINP K L L G K E 0 0 1 1 0 1 0 1 0 0 2 1 0 2 0 0 0 0 0 0 0 0 9 0 1080.5604 P11142;E9PKE3;E9PN89;E9PNE6;P54652;A8K7Q2;P17066 P11142 349 357 HSPA8;HSPA2;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6 no no 2 0.013042 90.657 By MS/MS 2 0 0 0 3470 1680;1711 3932 8900;8901 8718;8719 8719 2 LLQDFFNGR TRIPKVQKLLQDFFNG LQDFFNGRDLNKSINP K L L G R D 0 1 1 1 0 1 0 1 0 0 2 0 0 2 0 0 0 0 0 0 0 0 9 0 1108.5665 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 350 358 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.0033019 126.28 By MS/MS By MS/MS 2 3 22516000 12532000 9983500 3471 351 3933;3934 8902;8903;8904;8905;8906 8720;8721;8722;8723;8724;8725 8720 13 6 LLQDSSSPVDLAK EKHKILHRLLQDSSSP SSPVDLAKLTAEATGK R L L A K L 1 0 0 2 0 1 0 0 0 0 3 1 0 0 1 3 0 0 0 1 0 0 13 0 1371.7246 E7EWM1;Q15596 E7EWM1 693 705 NCOA2 Nuclear receptor coactivator 2 yes no 2 1.0487E-09 136.33 By MS/MS By MS/MS 1 1 54551000 27749000 26802000 3472 835 3935 8907;8908 8726;8727 8727 1559 2 LLQETELVEPLTPSGAMPNQAQMR IRKYTMRRLLQETELV MPNQAQMRILKETELR R L L M R I 2 1 1 0 0 3 3 1 0 0 4 0 2 0 3 1 2 0 0 1 0 0 24 0 2652.3251 B4DTR1;P04626;J3QLU9;J3QRJ7;J3KTI5 B4DTR1 414 437 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 yes no 3 0.010226 49.577 By matching By MS/MS 1 1 16613000 6801000 9812100 3473 563 3936 8909;8910 8728 8728 224;225 1041;6993 1 LLQLVEDR ANQAINPKLLQLVEDR LLQLVEDRGSGRSRGR K L L D R G 0 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 0 8 0 984.5604 J3KTA4;P17844 J3KTA4 471 478 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2 0.017119 105.57 By MS/MS By MS/MS 1 1 29068000 14689000 14379000 3474 1341 3937 8911;8912 8729;8730 8729 2 LLQQQQAVPVPPAPSSPPPLWAGLAK RQQELLLKLLQQQQAV PLWAGLAKQGLSMKTL K L L A K Q 4 0 0 0 0 4 0 1 0 0 4 1 0 0 7 2 0 1 0 2 0 0 26 0 2689.4956 O75420 O75420 741 766 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 3 0.002159 57.692 By MS/MS By MS/MS 1 1 14993000 7908000 7084600 3475 1545 3938 8913;8914 8731;8732 8731 2919;2920 2 LLQSPCVDTAPK TDAGERARLLQSPCVD PCVDTAPKSEWEASPG R L L P K S 1 0 0 1 1 1 0 0 0 0 2 1 0 0 2 1 1 0 0 1 0 0 12 0 1327.6806 H3BN87;H3BU46;H3BPV9;H3BP25;H3BMC5;Q9NVC3 H3BN87 25 36 SLC38A7 Putative sodium-coupled neutral amino acid transporter 7 yes no 2 0.025267 62.081 By MS/MS By matching 1 1 10329000 4052500 6276400 3476 1226 3939 8915;8916 8733 8733 2288 1 LLQSPLCAGCSSDK YARRRYYRLLQSPLCA CAGCSSDKQQCWCRQA R L L D K Q 1 0 0 1 2 1 0 1 0 0 3 1 0 0 1 3 0 0 0 0 0 0 14 0 1534.712 Q9UJX6 Q9UJX6 215 228 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 2 0.0041457 81.992 By MS/MS By MS/MS 1 1 15001000 7923700 7077100 3477 3015 3940 8917;8918 8734;8735 8734 6345 2 LLQTCFSSPADDSMDR EELEFCEKLLQTCFSS PADDSMDR________ K L L D R - 1 1 0 3 1 1 0 0 0 0 2 0 1 1 1 3 1 0 0 0 0 0 16 0 1841.7924 Q9NZL4 Q9NZL4 347 362 HSPBP1 Hsp70-binding protein 1 yes yes 2 5.6481E-11 140.46 By MS/MS By MS/MS 2 1 27927000 19696000 8230800 3478 2961 3941 8919;8920;8921 8736;8737;8738 8738 1176 6234;6235 3 LLQTDDEEEAGLLELLK TLLTLDNKLLQTDDEE AGLLELLKSQICDNAA K L L L K S 1 0 0 2 0 1 4 1 0 0 6 1 0 0 0 0 1 0 0 0 0 0 17 0 1927.999 P55060 P55060 252 268 CSE1L Exportin-2 yes yes 2 5.2343E-09 118.24 By MS/MS By matching 1 1 16308000 7181900 9126300 3479 1907 3942 8922;8923 8739 8739 0 LLQTTNNSPMNSKPQQIK KAVGTITKLLQTTNNS NSKPQQIKMQSTKKGP K L L I K M 0 0 3 0 0 3 0 0 0 1 2 2 1 0 2 2 2 0 0 0 0 0 18 1 2041.0626 O00178;B0QY59 O00178 573 590 GTPBP1 GTP-binding protein 1 yes no 3 0.0075362 69.431 By MS/MS By MS/MS 1 1 31569000 17763000 13806000 3480 1427 3943 8924;8925 8740;8741 8741 500 2621;7281 1 LLSASQLSAEEEEEKQAE MKWKKESKLLSASQLS EEEEKQAE________ K L L A E - 3 0 0 0 0 2 6 0 0 0 3 1 0 0 0 3 0 0 0 0 0 0 18 1 1989.9379 P17509 P17509 207 224 HOXB6 Homeobox protein Hox-B6 yes yes 2;3 1.8163E-53 188.9 By MS/MS By MS/MS 2 2 255360000 146560000 108800000 3481 1717 3944 8926;8927;8928;8929 8742;8743;8744 8742 3228 3 LLSESAQPLK PYPYPSKKLLSESAQP SESAQPLKKVEEEQEA K L L L K K 1 0 0 0 0 1 1 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 0 1084.6128 Q9H3N1 Q9H3N1 224 233 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.00012989 118.77 By MS/MS By MS/MS 1 1 8223100 4070000 4153100 3482 2827 3945 8930;8931 8745;8746 8745 5930 2 LLSEVMEELEK GGVTERTRLLSEVMEE EVMEELEKVKQEMEEK R L L E K V 0 0 0 0 0 0 4 0 0 0 3 1 1 0 0 1 0 0 0 1 0 0 11 0 1318.669 Q9NWB7 Q9NWB7 345 355 IFT57 Intraflagellar transport protein 57 homolog yes yes 2 0.0018118 96.23 By MS/MS 1 0 0 0 3483 2932 3946 8932 8747 8747 1164 6185 1 LLSFSPEEFPTLK GGLRGSSRLLSFSPEE PEEFPTLKAAGGQDKA R L L L K A 0 0 0 0 0 0 2 0 0 0 3 1 0 2 2 2 1 0 0 0 0 0 13 0 1506.797 Q5JSZ5 Q5JSZ5 164 176 PRRC2B Protein PRRC2B yes yes 2 2.4922E-11 146.79 By MS/MS By MS/MS 1 1 9064800 4438600 4626300 3484 2220 3947 8933;8934 8748;8749;8750 8749 4442;4443 3 LLSISGKR DEEEEDVKLLSISGKR LLSISGKRSAPGGGSK K L L K R S 0 1 0 0 0 0 0 1 0 1 2 1 0 0 0 2 0 0 0 0 0 0 8 1 872.54435 P06748;E5RI98 P06748 135 142 NPM1 Nucleophosmin yes no 2 0.011305 97.965 By MS/MS By MS/MS 1 1 24213000 14003000 10210000 3485 1647 3948 8935;8936 8751;8752 8752 3109 2 LLSLTKVSSPAGPTEDNDLSRK PSSRTSQKLLSLTKVS EDNDLSRKAVAQAPGR K L L R K A 1 1 1 2 0 0 1 1 0 0 4 2 0 0 2 4 2 0 0 1 0 0 22 2 2327.2333 H3BN63;Q86YC2 H3BN63 186 207 PALB2 Partner and localizer of BRCA2 yes no 3 0.032356 43.598 By matching By MS/MS 1 1 185740000 137990000 47753000 3486 1232 3949 8937;8938 8753 8753 0 LLSMPGAQGAAAAGSEPPPATTSPEGQPK SVQSLAMRLLSMPGAQ TSPEGQPKVHRARKTM R L L P K V 6 0 0 0 0 2 2 4 0 0 2 1 1 0 6 3 2 0 0 0 0 0 29 0 2717.333 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7 A0A0G2JIS2 151 179 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 3 2.8851E-07 83.934 By MS/MS By MS/MS 1 2 30208000 15350000 14858000 3487 350 3950 8939;8940;8941 8754;8755;8756 8755 138 624;6929;6930 3 LLSPLSSAR KAFQLKSRLLSPLSSA LSPLSSARLPPEPGLS R L L A R L 1 1 0 0 0 0 0 0 0 0 3 0 0 0 1 3 0 0 0 0 0 0 9 0 942.54983 A0A087WZ13;E9PAU2 A0A087WZ13 565 573 RAVER1 yes no 2 0.0042276 105.4 By MS/MS By MS/MS 1 1 474870000 292630000 182240000 3488 134 3951 8942;8943 8757;8758 8757 222 2 LLSPQMSGEEEDSDLAAK RHSLSSTKLLSPQMSG EDSDLAAKLGMCNREI K L L A K L 2 0 0 2 0 1 3 1 0 0 3 1 1 0 1 3 0 0 0 0 0 0 18 0 1918.883 P42858 P42858 1868 1885 HTT Huntingtin yes yes 2 9.9963E-05 116.61 By MS/MS By MS/MS 1 1 104210000 56623000 47583000 3489 1830 3952 8944;8945 8759;8760 8759 694 3456 2 LLSPRPSLLTPTGDPR AEGGDKNRLLSPRPSL LTPTGDPRANASPQKP R L L P R A 0 2 0 1 0 0 0 1 0 0 4 0 0 0 4 2 2 0 0 0 0 0 16 1 1718.9679 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7;C9JQE8 C9JE98 919 934 NCOR2 Nuclear receptor corepressor 2 yes no 3 0.001323 77.969 By MS/MS By MS/MS 1 1 17252000 9183200 8068600 3490 625 3953 8946;8947 8761;8762;8763 8762 1169 3 LLSSNEDDANILSSPTDR VQPSKLMRLLSSNEDD ILSSPTDRSMSSSLSA R L L D R S 1 1 2 3 0 0 1 0 0 1 3 0 0 0 1 4 1 0 0 0 0 0 18 0 1945.9229 H0YEG1;F5GY88;A0A0B4J1W0;O75448 H0YEG1 36 53 MED24 Mediator of RNA polymerase II transcription subunit 24 yes no 2;3 4.7374E-107 220.17 By MS/MS By MS/MS 4 4 271210000 141620000 129600000 3491 288 3954;3955 8948;8949;8950;8951;8952;8953;8954;8955 8764;8765;8766;8767;8768;8769;8770 8767 512;513;514 7 LLSTDAEAVSTR DVEKEVKRLLSTDAEA DAEAVSTRWEIIAEDE R L L T R W 2 1 0 1 0 0 1 0 0 0 2 0 0 0 0 2 2 0 0 1 0 0 12 0 1261.6514 Q15545 Q15545 169 180 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 2 0.0060717 78.529 By MS/MS By matching 1 1 27866000 14654000 13212000 3492 2145 3956 8956;8957 8771 8771 4256 1 LLVQQFSILETMTALDFNDFR HRVSVILKLLVQQFSI ALDFNDFREYLSPASG K L L F R E 1 1 1 2 0 2 1 0 0 1 4 0 1 3 0 1 2 0 0 1 0 0 21 0 2500.2672 D6RB68;D6RA50;P48775 D6RB68 17 37 TDO2 Tryptophan 2,3-dioxygenase yes no 3 0.017403 43.598 By MS/MS By matching 1 1 7197800 3292400 3905400 3493 736 3957 8958;8959 8772 8772 281 1 LMASVSNIHK L M H K 1 0 1 0 0 0 0 0 1 1 1 1 1 0 0 2 0 0 0 1 0 0 10 0 1098.5856 REV__Q14204 yes yes 2 0.021177 49.35 By matching By MS/MS 1 1 8396200 4607900 3788300 + 3494 3209 3958 8960;8961 8773 8773 1262 6807 1 LMFKTEGPDSD QSTSRHKKLMFKTEGP KTEGPDSD________ K L M S D - 0 0 0 2 0 0 1 1 0 0 1 1 1 1 1 1 1 0 0 0 0 0 11 1 1238.5489 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 224 234 TP53 Cellular tumor antigen p53 yes no 2 0.030751 67.879 By MS/MS By matching 1 1 10387000 4731000 5656200 3495 147 3959 8962;8963 8774 8774 1 LMHNASDSEVDQDDVVEWK HLTEEPTKLMHNASDS QDDVVEWKDGASPSES K L M W K D 1 0 1 4 0 1 2 0 1 0 1 1 1 0 0 2 0 1 0 3 0 0 19 0 2215.9692 Q9H2P0 Q9H2P0 948 966 ADNP Activity-dependent neuroprotector homeobox protein yes yes 2;3 7.7971E-05 116.96 By MS/MS By MS/MS 3 3 94011000 47575000 46436000 3496 2822 3960;3961;3962 8964;8965;8966;8967;8968;8969 8775;8776;8777;8778;8779;8780;8781 8781 1121 5909;5910 6 LMIWDTR GSVADDQKLMIWDTRS KLMIWDTRSNNTSKPS K L M T R S 0 1 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 1 0 0 0 0 7 0 933.47422 H0YF10;Q5JP01;E9PC52;Q16576;Q09028;Q5JP02;H0YCT5;H0YDK2 H0YF10 55 61 RBBP4;RBBP7 Histone-binding protein RBBP7;Histone-binding protein RBBP4 yes no 2 0.013076 69.998 By MS/MS 1 0 0 0 3497 847 3963 8970 8782 8782 322 1 LMLLLEVISGER EDFRNGLKLMLLLEVI LEVISGERLPRPDKGK K L M E R L 0 1 0 0 0 0 2 1 0 1 4 0 1 0 0 1 0 0 0 1 0 0 12 0 1371.7796 A0A087WSZ2;Q08043;G3V5M4;G3V2N5;P12814;P35609;O43707 A0A087WSZ2 122 133 ACTN3;ACTN1;ACTN2;ACTN4 Alpha-actinin-3;Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 yes no 2 0.0035903 91.658 By MS/MS 1 3248900 3248900 0 3498 27 3964 8971 8783 8783 12 1 LMLPDSPLVEEGR LSKEDFLKLMLPDSPL SPLVEEGRRKFSFYGN K L M G R R 0 1 0 1 0 0 2 1 0 0 3 0 1 0 2 1 0 0 0 1 0 0 13 0 1454.7439 Q9P2F8 Q9P2F8 1456 1468 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 2 0.0013613 82.069 By MS/MS By MS/MS 1 1 8246100 4559900 3686200 3499 2980 3965 8972;8973 8784;8785 8784 1181 6275 2 LMLSTSEYSQSPK SLTGDSCKLMLSTSEY SEYSQSPKMESLSSHR K L M P K M 0 0 0 0 0 1 1 0 0 0 2 1 1 0 1 4 1 0 1 0 0 0 13 0 1469.7072 Q12888;A6NNK5;C9JXV0 Q12888 515 527 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.00098765 100.69 By MS/MS By MS/MS 2 2 51130000 26682000 24448000 3500 2031 3966;3967 8974;8975;8976;8977 8786;8787;8788;8789 8787 3955;3956;3957 3 LMMNDNDISSSTSR KNLKVLQKLMMNDNDI DISSSTSRTMESESLR K L M S R T 0 1 2 2 0 0 0 0 0 1 1 0 2 0 0 4 1 0 0 0 0 0 14 0 1569.6763 Q9NYK1 Q9NYK1 601 614 TLR7 Toll-like receptor 7 yes yes 2 0.031456 41.743 By MS/MS 1 0 0 0 3501 2948 3968 8978 8790 8790 1173 1 LMPVSLSVQSPAALTAEK GRPRKDSRLMPVSLSV PAALTAEKEAMCLSAP R L M E K E 3 0 0 0 0 1 1 0 0 0 3 1 1 0 2 3 1 0 0 2 0 0 18 0 1840.9968 P54198 P54198 652 669 HIRA Protein HIRA yes yes 2 0.00046626 88.385 By MS/MS By matching 1 1 14033000 8005700 6027300 3502 1902 3969 8979;8980 8791 8791 740 3680 1 LMSKESGSSMIG GSSVTRSRLMSKESGS ESGSSMIG________ R L M I G - 0 0 0 0 0 0 1 2 0 1 1 1 2 0 0 4 0 0 0 0 0 0 12 1 1225.5683 O00398 O00398 328 339 P2RY10 Putative P2Y purinoceptor 10 yes yes 1 0.026053 42.976 By MS/MS 1 2042500 0 2042500 3503 1434 3970 8981 8792 8792 504 2637;2638 1 LMSLLTSPHQPPPPPPASASPSAVPNGPQSPK WPFIKKNKLMSLLTSP PNGPQSPKQQKEPLSH K L M P K Q 3 0 1 0 0 2 0 1 1 0 3 1 1 0 11 6 1 0 0 1 0 0 32 0 3183.6387 Q96RU3 Q96RU3 330 361 FNBP1 Formin-binding protein 1 yes yes 3 8.3668E-05 64.296 By MS/MS By MS/MS 1 1 29475000 16685000 12790000 3504 2706 3971 8982;8983 8793;8794;8795 8794 1077 5584;5585 3 LMSPVLK RADSQTEKLMSPVLKQ KLMSPVLKQHLNQQAS K L M L K Q 0 0 0 0 0 0 0 0 0 0 2 1 1 0 1 1 0 0 0 1 0 0 7 0 786.46735 E7EPB1;E7EQS8;Q6N021 E7EPB1 694 700 TET2 Methylcytosine dioxygenase TET2 yes no 2 0.024011 101.25 By MS/MS 1 0 0 0 3505 798 3972 8984 8796 8796 1424 1 LMTGDTYTAHAGAK VADFGLSRLMTGDTYT YTAHAGAKFPIKWTAP R L M A K F 3 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 3 0 1 0 0 0 14 0 1435.6766 P00519;P42684 P42684 433 446 ABL1;ABL2 Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2 no no 2 0.00060482 106.67 By MS/MS By MS/MS 1 1 27426000 13011000 14415000 3506 1828;1625 3973 8985;8986 8797;8798 8798 583 7364;8215 2 LMTSLVKVALQLSVHQDNNQR TSTLAAMKLMTSLVKV VHQDNNQRQYEAERNK K L M Q R Q 1 1 2 1 0 3 0 0 1 0 4 1 1 0 0 2 1 0 0 3 0 0 21 1 2393.2849 D6W5U7;Q9UJ98 D6W5U7 242 262 STAG3 Cohesin subunit SA-3 yes no 3 0.018691 61.648 By MS/MS 1 0 0 0 3507 772 3974 8987 8799 8799 1381;1382 1 LNASPAAR GAQNEPPRLNASPAAR LNASPAAREEATSPGA R L N A R E 3 1 1 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 8 0 798.4348 Q9UGU0 Q9UGU0 571 578 TCF20 Transcription factor 20 yes yes 2 0.015483 77.533 By MS/MS By MS/MS 1 3 31815000 11936000 19879000 3508 3001 3975 8988;8989;8990;8991 8800;8801;8802 8800 6312 3 LNATASLEQER PQPQARSRLNATASLE TASLEQERSERPRAPG R L N E R S 2 1 1 0 0 1 2 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1230.6204 O76024 O76024 27 37 WFS1 Wolframin yes yes 2 2.5934E-05 129.74 By matching By MS/MS 1 1 67770000 34960000 32811000 3509 1563 3976 8992;8993 8803 8803 7346 1 LNDNSKSDEHVDVR NQFMAVYKLNDNSKSD SDEHVDVRVDGLMLKF K L N V R V 0 1 2 3 0 0 1 0 1 0 1 1 0 0 0 2 0 0 0 2 0 0 14 1 1626.7598 A0A0C4DGH6;A0JNW5 A0A0C4DGH6 211 224 UHRF1BP1L UHRF1-binding protein 1-like yes no 3 0.027322 47.039 By MS/MS 1 2383600 0 2383600 3510 320 3977 8994 8804 8804 561 0 LNDPFQPFPGNDSPK LDSPDPFKLNDPFQPF FPGNDSPKEKDPEIFC K L N P K E 0 0 2 2 0 1 0 1 0 0 1 1 0 2 4 1 0 0 0 0 0 0 15 0 1671.7893 B1AUU8;P42566 B1AUU8 668 682 EPS15 Epidermal growth factor receptor substrate 15 yes no 2 0.00051679 99.238 By matching By MS/MS 1 1 17402000 8969400 8432400 3511 533 3978 8995;8996 8805 8805 1003 1 LNDYIFSFDK YADLSHNRLNDYIFSF DYIFSFDKMLDDRGNT R L N D K M 0 0 1 2 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 0 0 0 10 0 1260.6027 P54136 P54136 513 522 RARS Arginine--tRNA ligase, cytoplasmic yes yes 2 6.8099E-11 169.41 By MS/MS 1 2546000 2546000 0 3512 1901 3979 8997 8806 8806 1 LNELYKASVVSCQGLSLR TVKQVVRRLNELYKAS SCQGLSLRLQRFFLDK R L N L R L 1 1 1 0 1 1 1 1 0 0 4 1 0 0 0 3 0 0 1 2 0 0 18 1 2036.0725 O75385 O75385 939 956 ULK1 Serine/threonine-protein kinase ULK1 yes yes 2 0.029332 48.568 By MS/MS 1 6351900 6351900 0 3513 1543 3980 8998 8807 8807 0 LNENIKNAMLIKGGNANATVTK FLEKREPKLNENIKNA NANATVTKVLKDVEKY K L N T K V 3 0 5 0 0 0 1 2 0 2 2 3 1 0 0 0 2 0 0 1 0 0 22 2 2313.2475 U3KQN5;Q5VXM9;Q9H7B2 U3KQN5 26 47 RPF2 Ribosome production factor 2 homolog yes no 3 0.029728 45.88 By MS/MS 1 0 0 0 3514 2279 3981 8999 8808 8808 1 LNETELTDLEGQQESPPKNYLCIEEEK DSVVSEDRLNETELTD YLCIEEEKIIDHSHSD R L N E K I 0 0 2 1 1 2 7 1 0 1 4 2 0 0 2 1 2 0 1 0 0 0 27 1 3205.4973 Q9ULF5 Q9ULF5 577 603 SLC39A10 Zinc transporter ZIP10 yes yes 3 8.1661E-06 80.835 By MS/MS By MS/MS 1 1 13375000 6031100 7343900 3515 3040 3982 9000;9001 8809;8810 8810 6398;8501 2 LNFDMTASPK IDKQEKVKLNFDMTAS FDMTASPKILMSKPVL K L N P K I 1 0 1 1 0 0 0 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 10 0 1122.5379 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 326 335 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.0031505 100.73 By MS/MS By MS/MS 2 2 44029000 23805000 20224000 3516 82 3983;3984 9002;9003;9004;9005 8811;8812;8813;8814 8814 29 142 4 LNGPGENVSEDEAQSSNQR SKENRETKLNGPGENV EAQSSNQRKRANKHKW K L N Q R K 1 1 3 1 0 2 3 2 0 0 1 0 0 0 1 3 0 0 0 1 0 0 19 0 2029.8937 G3V0E9;H0Y9K3;D6R9W6;D6RJB0;Q659C4 G3V0E9 52 70 LARP1B La-related protein 1B yes no 2 0.0053358 69.361 By matching By MS/MS 1 1 22991000 10023000 12968000 3517 734 3985 9006;9007 8815 8815 1333 1 LNGPQDHSHLLYSTIPR RQKFSDLKLNGPQDHS LLYSTIPRMQEPGQIV K L N P R M 0 1 1 1 0 1 0 1 2 1 3 0 0 0 2 2 1 0 1 0 0 0 17 0 1946.9963 C9JZR2;O60716;E9PKL1 C9JZR2 85 101 CTNND1 Catenin delta-1 yes no 3 0.0024707 69.522 By MS/MS By MS/MS 1 1 26849000 15993000 10856000 3518 706 3986 9008;9009 8816;8817;8818;8819 8819 8104 4 LNHVAAGLVSPSLK LMSTVDPKLNHVAAGL GLVSPSLKSDTSSKEI K L N L K S 2 0 1 0 0 0 0 1 1 0 3 1 0 0 1 2 0 0 0 2 0 0 14 0 1404.8089 Q5T757;Q05519;Q5T760 Q5T757 138 151 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2;3 5.5771E-16 145.94 By MS/MS By MS/MS 2 2 659240000 372290000 286940000 3519 2003 3987 9010;9011;9012;9013 8820;8821;8822;8823 8823 3863 4 LNISFPATGCQK ________________ FPATGCQKLIEVDDER K L N Q K L 1 0 1 0 1 1 0 1 0 1 1 1 0 1 1 1 1 0 0 0 0 0 12 0 1334.6653 P62753;A2A3R7 P62753 3 14 RPS6 40S ribosomal protein S6 yes no 2 0.028469 70.399 By MS/MS By matching 1 1 5970700 2964700 3006000 3520 1944 3988 9014;9015 8824 8824 1 LNLGTDSDSSPQK TGDISVEKLNLGTDSD DSDSSPQKSSRDPPSS K L N Q K S 0 0 1 2 0 1 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 13 0 1360.647 Q16512;K7EN76 Q16512 553 565 PKN1 Serine/threonine-protein kinase N1 yes no 2 5.1274E-07 132.06 By MS/MS By MS/MS 1 1 53798000 26749000 27049000 3521 2162 3989 9016;9017 8825;8826 8826 4297;4298;4299 2 LNLQTSTSIPNVTEMK LSTATCEKLNLQTSTS IPNVTEMKTNMSLGLI K L N M K T 0 0 2 0 0 1 1 0 0 1 2 1 1 0 1 2 3 0 0 1 0 0 16 0 1774.9135 P17301;D6RG08;E9PB77;E7EMF1;E7ESP4 P17301 95 110 ITGA2 Integrin alpha-2 yes no 3 0.018267 52.254 By MS/MS By matching 1 1 18305000 7259800 11045000 3522 1715 3990 9018;9019 8827 8827 642 3226 0 LNLTSPK PLSSPNIKLNLTSPKR KLNLTSPKRGQKREEG K L N P K R 0 0 1 0 0 0 0 0 0 0 2 1 0 0 1 1 1 0 0 0 0 0 7 0 771.44905 A0A0A0MQZ8;H0Y7Y3;H0Y785;H0Y472;H0Y4P6;Q8IWZ3 A0A0A0MQZ8 58 64 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes no 2 0.020292 106.68 By MS/MS By MS/MS 1 1 19478000 9298700 10180000 3523 194 3991 9020;9021 8828;8829 8829 345 2 LNNLVLFDK SKGKVRDKLNNLVLFD NNLVLFDKATYDKLCK K L N D K A 0 0 2 1 0 0 0 0 0 0 3 1 0 1 0 0 0 0 0 1 0 0 9 0 1074.6073 P62851 P62851 44 52 RPS25 40S ribosomal protein S25 yes yes 2 0.0087942 88.37 By matching By MS/MS 1 1 8842200 4257900 4584200 3524 1946 3992 9022;9023 8830 8830 1 LNQPGTPTR GWLCKTLRLNQPGTPT NQPGTPTRTAV_____ R L N T R T 0 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 2 0 0 0 0 0 9 0 982.51959 G5E9C7;P36507;M0R1B6 G5E9C7 292 300 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 2 0.0030975 121.36 By MS/MS By MS/MS 1 1 678940000 388110000 290830000 3525 1098 3993 9024;9025 8831;8832 8831 7185 2 LNQSGTSVGTDEESDVTQEEER SPSKSPAKLNQSGTSV DVTQEEERDGQYFEPV K L N E R D 0 1 1 2 0 2 5 2 0 0 1 0 0 0 0 3 3 0 0 2 0 0 22 0 2409.0415 P49792;J3KNE0;A6NKT7;Q7Z3J3;F8VYC4;P0DJD0;P0DJD1 P49792 2284 2305 RANBP2;RGPD3;RGPD4;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 yes no 2;3 3.2045E-46 175.02 By MS/MS By MS/MS 4 2 127590000 68627000 58958000 3526 1860 3994 9026;9027;9028;9029;9030;9031 8833;8834;8835;8836 8835 3603;7476 4 LNQSPSLAPVKR DKTNAPSRLNQSPSLA PSLAPVKRTYEQMEFP R L N K R T 1 1 1 0 0 1 0 0 0 0 2 1 0 0 2 2 0 0 0 1 0 0 12 1 1308.7514 Q9H2P0 Q9H2P0 706 717 ADNP Activity-dependent neuroprotector homeobox protein yes yes 2 0.022617 66.989 By matching By MS/MS 1 1 27299000 16168000 11131000 3527 2822 3995 9032;9033 8837 8837 5911 1 LNQSSPDNVTDTK SILNSNIKLNQSSPDN PDNVTDTKGALSPITD K L N T K G 0 0 2 2 0 1 0 0 0 0 1 1 0 0 1 2 2 0 0 1 0 0 13 0 1417.6685 Q08AD1 Q08AD1 595 607 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 2.5897E-12 153 By MS/MS By MS/MS 1 1 28257000 15350000 12908000 3528 2017 3996 9034;9035 8838;8839 8839 3891;3892 2 LNRSNSELEDEILCLEK QKEATCEKLNRSNSEL DEILCLEKELKEEKSK K L N E K E 0 1 2 1 1 0 4 0 0 1 4 1 0 0 0 2 0 0 0 0 0 0 17 1 2061.0048 G3V5K6;G3V599;Q8IX94;Q86UF2;P0CG41;A4D2H0;O15320;Q96PC5 G3V5K6 96 112 CTAGE5;CTAGE4;CTAGE6;CTAGE8;CTAGE15;MIA2 cTAGE family member 4;cTAGE family member 6;cTAGE family member 8;cTAGE family member 15;cTAGE family member 5;Melanoma inhibitory activity protein 2 yes no 3 0.0013481 76.713 By MS/MS 1 3455800 3455800 0 3529 459 3997 9036 8840 8840 855;856 1 LNSGGGLSEELGSAR SDLAKRRKLNSGGGLS SEELGSARRSGEVTLT K L N A R R 1 1 1 0 0 0 2 4 0 0 3 0 0 0 0 3 0 0 0 0 0 0 15 0 1445.711 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7 A0A0G2JIS2 230 244 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 2 0.0029586 83.252 By MS/MS By MS/MS 1 1 8771000 4161600 4609500 3530 350 3998 9037;9038 8841;8842 8841 625 2 LNSHFSNLSQPRK AGAAESERLNSHFSNL SNLSQPRKNLWGIKST R L N R K N 0 1 2 0 0 1 0 0 1 0 2 1 0 1 1 3 0 0 0 0 0 0 13 1 1526.7954 J3QL17;Q9UHL0 J3QL17 21 33 DDX25 ATP-dependent RNA helicase DDX25 yes no 3 0.025052 50.484 By MS/MS 1 0 0 0 3531 1348 3999 9039 8843 8843 2493;2494 1 LNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGR TAVADTRRLNSKPQDL PQTVGVGRARFTTYEV R L N G R A 1 1 3 3 0 2 1 3 0 2 3 1 0 2 4 2 2 0 1 2 0 0 33 1 3601.8053 A0A087X0R6;Q9UMY4 A0A087X0R6 12 44 SNX12 Sorting nexin-12 yes no 3 6.2794E-05 68.269 By MS/MS By MS/MS 1 1 31380000 16046000 15333000 3532 160 4000 9040;9041 8844;8845 8845 6873;8000 2 LNSPLEK VDSGKTVKLNSPLEKI KLNSPLEKINSFSPQK K L N E K I 0 0 1 0 0 0 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 7 0 799.44397 J3QSE8;Q9BX63 J3QSE8 195 201 BRIP1 Fanconi anemia group J protein yes no 2 0.025033 98.582 By MS/MS By MS/MS 1 1 22547000 11921000 10626000 3533 1362 4001 9042;9043 8846;8847 8847 2523 2 LNTEEYLR EAVLIAHKLNTEEYLR LNTEEYLRVIGKPAHL K L N L R V 0 1 1 0 0 0 2 0 0 0 2 0 0 0 0 0 1 0 1 0 0 0 8 0 1036.5189 P50748 P50748 1757 1764 KNTC1 Kinetochore-associated protein 1 yes yes 2 0.030257 60.478 By MS/MS 1 21459000 0 21459000 3534 1869 4002 9044 8848 8848 0 LNTSDFQK FGDLPRPRLNTSDFQK LNTSDFQKLKRKY___ R L N Q K L 0 0 1 1 0 1 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 8 0 951.46616 Q96B36 Q96B36 244 251 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.022665 96.665 By MS/MS By MS/MS 1 1 330520000 180430000 150090000 3535 2624 4003 9045;9046 8849;8850 8849 2 LNTVASPK SKKIKLDRLNTVASPK LNTVASPKDCQELASI R L N P K D 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 8 0 828.47052 Q96T58 Q96T58 1057 1064 SPEN Msx2-interacting protein yes yes 2 0.0046825 121.61 By MS/MS 1 5696300 0 5696300 3536 2716 4004 9047 8851 8851 5631 1 LNVEPDYLEVLEK EYLELKAKLNVEPDYL DYLEVLEKQTTFSQF_ K L N E K Q 0 0 1 1 0 0 3 0 0 0 3 1 0 0 1 0 0 0 1 2 0 0 13 0 1559.8083 O94991 O94991 939 951 SLITRK5 SLIT and NTRK-like protein 5 yes yes 2 0.00052056 116.84 By MS/MS By MS/MS 1 1 28528000 17078000 11450000 3537 1578 4005 9048;9049 8852;8853 8852 8209 2 LNVHMNPPQVKATIISEQQAK VRLLVGGKLNVHMNPP IISEQQAKSLLKNENT K L N A K S 2 0 2 0 0 3 1 0 1 2 1 2 1 0 2 1 1 0 0 2 0 0 21 1 2345.2525 K7EK35;P51692;P42229 K7EK35 360 380 STAT5A;STAT5B Signal transducer and activator of transcription;Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription 5A yes no 2 0.032212 40.645 By MS/MS 1 0 0 0 3538 1378 4006 9050 8854 8854 480 1 LNVLEKSSPGHR AISKLEARLNVLEKSS EKSSPGHRATAPQTQH R L N H R A 0 1 1 0 0 0 1 1 1 0 2 1 0 0 1 2 0 0 0 1 0 0 12 1 1335.7259 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;E9PPR1;E9PL12;E9PK06;E9PN91;E9PMW7;H0YCK7 E9PL71 88 99 EEF1D Elongation factor 1-delta yes no 2;3 1.9302E-14 155.14 By MS/MS By MS/MS 2 2 45288000 27681000 17608000 3539 172 4007 9051;9052;9053;9054 8855;8856;8857 8855 281;282 3 LNVTEQEKIDK APALVSKKLNVTEQEK TEQEKIDKLMIEMDGT K L N D K L 0 0 1 1 0 1 2 0 0 1 1 2 0 0 0 0 1 0 0 1 0 0 11 1 1315.6983 P06733;K7EM90 P06733 82 92 ENO1 Alpha-enolase;Enolase yes no 3 0.031439 48.188 By MS/MS 1 0 0 0 3540 1646 4008 9055 8858 8858 1 LNYSDESPEAGK TDGLSKIRLNYSDESP DESPEAGKMLEDELVD R L N G K M 1 0 1 1 0 0 2 1 0 0 1 1 0 0 1 2 0 0 1 0 0 0 12 0 1308.5834 Q9GZR1 Q9GZR1 913 924 SENP6 Sentrin-specific protease 6 yes yes 2 0.0032496 84.817 By MS/MS By MS/MS 1 1 11245000 4732300 6513000 3541 2797 4009 9056;9057 8859;8860 8859 5840 2 LPALGEAHVSPEVATADK GREDLPTRLPALGEAH PEVATADKAPLQAPPV R L P D K A 4 0 0 1 0 0 2 1 1 0 2 1 0 0 2 1 1 0 0 2 0 0 18 0 1803.9367 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 1220 1237 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2;3 0.00017914 120.82 By MS/MS By MS/MS 2 2 38968000 20620000 18348000 3542 371 4010 9058;9059;9060;9061 8861;8862;8863;8864 8861 687 4 LPASDSAEASNSR SSPGDGLKLPASDSAE SAEASNSRADCSWTPL K L P S R A 3 1 1 1 0 0 1 0 0 0 1 0 0 0 1 4 0 0 0 0 0 0 13 0 1303.6004 Q5H9F3 Q5H9F3 124 136 BCORL1 BCL-6 corepressor-like protein 1 yes yes 1 0.029048 43.297 By MS/MS 1 2591600 2591600 0 3543 2215 4011 9062 8865 8865 1 LPATAAEPEAAVISNGEH SPAKKVPRLPATAAEP AVISNGEH________ R L P E H - 5 0 1 0 0 0 3 1 1 1 1 0 0 0 2 1 1 0 0 1 0 0 18 0 1775.869 Q01581 Q01581 503 520 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 2;3 0.001134 89.831 By MS/MS By MS/MS 2 1 46259000 37055000 9204100 3544 1981 4012 9063;9064;9065 8866;8867;8868 8868 98 3802 2 LPDLSPVENK AGPIKAQKLPDLSPVE DLSPVENKEHKPGPIG K L P N K E 0 0 1 1 0 0 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1110.5921 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2103 2112 PRRC2C Protein PRRC2C yes no 2 7.8014E-05 140.63 By MS/MS By MS/MS 1 1 89129000 48047000 41082000 3545 802 4013 9066;9067 8869;8870 8869 1430 2 LPDSDDDEDEETAIQR QVTLQDYRLPDSDDDE DEETAIQRVLQQLTEE R L P Q R V 1 1 0 5 0 1 3 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 16 0 1846.7705 H3BRM1;H3BRF9;Q96K21 H3BRM1 259 274 ZFYVE19 Abscission/NoCut checkpoint regulator yes no 2 2.3918E-10 139.29 By MS/MS By MS/MS 1 1 96385000 57637000 38748000 3546 1247 4014 9068;9069 8871;8872 8871 2327 2 LPDSPALAK HPGSLVEKLPDSPALA PDSPALAKKALLALNH K L P A K K 2 0 0 1 0 0 0 0 0 0 2 1 0 0 2 1 0 0 0 0 0 0 9 0 910.51238 E9PNJ4;G0XQ39;Q13586;H0YDB2 E9PNJ4 399 407 STIM1 Stromal interaction molecule 1 yes no 2 0.017557 68.786 By MS/MS 1 3852100 3852100 0 3547 916 4015 9070 8873 8873 1705 1 LPEASQSPLVLK IKAECTARLPEASQSP SQSPLVLKQAVRKPLE R L P L K Q 1 0 0 0 0 1 1 0 0 0 3 1 0 0 2 2 0 0 0 1 0 0 12 0 1280.734 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 308 319 MTA1 Metastasis-associated protein MTA1 yes no 2 1.4093E-06 129.88 By MS/MS By MS/MS 1 1 33646000 17276000 16370000 3548 818 4016 9071;9072 8874;8875 8874 1482 2 LPEGDLGK GEVREDLRLPEGDLGK LPEGDLGKEIEQKYDC R L P G K E 0 0 0 1 0 0 1 2 0 0 2 1 0 0 1 0 0 0 0 0 0 0 8 0 827.43888 I3L397;I3L504;P63241;Q6IS14 I3L397 114 121 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 2 0.02728 82.305 By MS/MS 1 2890200 0 2890200 3549 1311 4017 9073 8876 8876 1 LPEGPVDSEDDEEEDEEIDR VGDVDLTRLPEGPVDS EEDEEIDRTDPLQGRD R L P D R T 0 1 0 5 0 0 7 1 0 1 1 0 0 0 2 1 0 0 0 1 0 0 20 0 2315.9401 B7Z7Y1;E9PCH4;Q8TEU7;D6RD23;D6RIH0;D6RB02 B7Z7Y1 223 242 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 2 0.00036777 105.01 By MS/MS By MS/MS 1 1 39000000 17953000 21047000 3550 592 4018 9074;9075 8877;8878 8877 1079 2 LPEGPVDSEDDEEEDEEIDRTDPLQGR VGDVDLTRLPEGPVDS RTDPLQGRDLVRECLE R L P G R D 0 2 0 6 0 1 7 2 0 1 2 0 0 0 3 1 1 0 0 1 0 0 27 1 3083.3327 B7Z7Y1;E9PCH4;Q8TEU7;D6RD23;D6RIH0;D6RB02 B7Z7Y1 223 249 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 3 0.012159 48.198 By MS/MS 1 39429000 39429000 0 3551 592 4019 9076 8879 8879 1079 1 LPGLGEPEVEYETLK NDVNVATRLPGLGEPE EVEYETLKDTSEKLKQ R L P L K D 0 0 0 0 0 0 4 2 0 0 3 1 0 0 2 0 1 0 1 1 0 0 15 0 1672.856 Q9HCM4 Q9HCM4 489 503 EPB41L5 Band 4.1-like protein 5 yes yes 2 2.5575E-05 103.08 By MS/MS By MS/MS 1 1 35252000 17947000 17304000 3552 2878 4020 9077;9078 8880;8881 8881 8468 1 LPGLGEPEVEYETLKDTSEK NDVNVATRLPGLGEPE TLKDTSEKLKQLEMEN R L P E K L 0 0 0 1 0 0 5 2 0 0 3 2 0 0 2 1 2 0 1 1 0 0 20 1 2233.1002 Q9HCM4 Q9HCM4 489 508 EPB41L5 Band 4.1-like protein 5 yes yes 2;3 0.00010466 119.51 By MS/MS By MS/MS 2 2 97918000 45316000 52602000 3553 2878 4021 9079;9080;9081;9082 8882;8883;8884;8885;8886;8887 8882 8468 6 LPGSGAVQAASPER APGARLLRLPGSGAVQ VQAASPERAGWTEALR R L P E R A 3 1 0 0 0 1 1 2 0 0 1 0 0 0 2 2 0 0 0 1 0 0 14 0 1338.6892 Q86U90 Q86U90 50 63 YRDC YrdC domain-containing protein, mitochondrial yes yes 2 0.0070822 76.82 By MS/MS By matching 1 1 70447000 36533000 33914000 3554 2400 4022 9083;9084 8888 8888 4898 1 LPIFSRLSISDD PTLDNSRRLPIFSRLS SRLSISDD________ R L P D D - 0 1 0 2 0 0 0 0 0 2 2 0 0 1 1 3 0 0 0 0 0 0 12 1 1361.7191 Q07352;P47974 Q07352 327 338 ZFP36L1;ZFP36L2 Zinc finger protein 36, C3H1 type-like 1;Zinc finger protein 36, C3H1 type-like 2 yes no 2 0.0057301 100.55 By MS/MS 1 0 0 0 3555 1843 4023 9085 8889 8889 3533 1 LPIGDVATQYFADR GAKVVLSKLPIGDVAT ATQYFADRDMFCAGRV K L P D R D 2 1 0 2 0 1 0 1 0 1 1 0 0 1 1 0 1 0 1 1 0 0 14 0 1564.7886 Q99832 Q99832 293 306 CCT7 T-complex protein 1 subunit eta yes yes 2 0.0030839 90.913 By MS/MS By matching 1 1 6379900 4461500 1918400 3556 2734 4024 9086;9087 8890 8890 1 LPISASHSSK SQEICSPRLPISASHS ISASHSSKTRSLVGGL R L P S K T 1 0 0 0 0 0 0 0 1 1 1 1 0 0 1 4 0 0 0 0 0 0 10 0 1025.5506 P52948;H7C3P6 P52948 1031 1040 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 2 0.0066021 79.82 By MS/MS 1 7850500 7850500 0 3557 1893 4025 9088 8891 8891 3665 1 LPLCSLPGEPGNGPDQQLQRSPPEFQ VEDKGACRLPLCSLPG QRSPPEFQ________ R L P F Q - 0 1 1 1 1 4 2 3 0 0 4 0 0 1 6 2 0 0 0 0 0 0 26 1 2860.3814 Q96GX2 Q96GX2 72 97 ATXN7L3B Putative ataxin-7-like protein 3B yes yes 3 8.9453E-05 77.1 By MS/MS By MS/MS 2 2 100510000 48927000 51587000 3558 2656 4026;4027 9089;9090;9091;9092 8892;8893;8894 8893 5479 3 LPLLPPESPGPLR ERRGGGLRLPLLPPES PESPGPLRQRHVACLA R L P L R Q 0 1 0 0 0 0 1 1 0 0 4 0 0 0 5 1 0 0 0 0 0 0 13 0 1384.8078 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5 A0A0G2JNZ2 846 858 SCRIB Protein scribble homolog yes no 2;3 2.8747E-10 142.39 By MS/MS By MS/MS 3 1 79860000 47409000 32450000 3559 361 4028 9093;9094;9095;9096 8895;8896;8897;8898;8899;8900;8901;8902;8903 8896 654 9 LPLNMLPQLISNLTQASVSLK VSLFNILRLPLNMLPQ TQASVSLKRIQQFLSQ R L P L K R 1 0 2 0 0 2 0 0 0 1 6 1 1 0 2 3 1 0 0 1 0 0 21 0 2279.2923 O15438 O15438 580 600 ABCC3 Canalicular multispecific organic anion transporter 2 yes yes 2 0.031216 43.813 By MS/MS 1 0 0 0 3560 1480 4029 9097 8904 8904 533 1 LPLPDDEHDLSDR RYHKKLIRLPLPDDEH DEHDLSDRELELEDSA R L P D R E 0 1 0 4 0 0 1 0 1 0 3 0 0 0 2 1 0 0 0 0 0 0 13 0 1520.7107 Q8NF91;E7ENN3;A0A0C4DG40;Q5JV20;F8WAI0;H0Y326;H0Y325 Q8NF91 8213 8225 SYNE1 Nesprin-1 yes no 2 0.0031106 85.287 By MS/MS By MS/MS 1 1 28672000 14652000 14020000 3561 2516 4030 9098;9099 8905;8906 8905 5137 2 LPLSPPLVEDSAFEPSRK SCFSLETKLPLSPPLV SAFEPSRKDMDEVEEK K L P R K D 1 1 0 1 0 0 2 0 0 0 3 1 0 1 4 3 0 0 0 1 0 0 18 1 1981.052 O96007 O96007 17 34 MOCS2 Molybdopterin synthase catalytic subunit yes yes 2;3 1.576E-10 138.05 By MS/MS By MS/MS 2 1 27860000 19261000 8598500 3562 1616 4031 9100;9101;9102 8907;8908;8909;8910;8911;8912 8910 3060 6 LPLVPESPR GLEGRPERLPLVPESP PLVPESPRRMMTRSQD R L P P R R 0 1 0 0 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 9 0 1006.5811 C9J0I9;Q86WB0 C9J0I9 272 280 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.00066363 118.28 By MS/MS By MS/MS 1 1 119480000 63970000 55514000 3563 624 4032 9103;9104 8913;8914;8915;8916 8914 1154 4 LPLVPESPRR GLEGRPERLPLVPESP LVPESPRRMMTRSQDA R L P R R M 0 2 0 0 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 10 1 1162.6822 C9J0I9;Q86WB0 C9J0I9 272 281 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 0.0035136 89.403 By MS/MS By MS/MS 2 2 138110000 78368000 59742000 3564 624 4033 9105;9106;9107;9108 8917;8918;8919;8920;8921;8922 8918 1154 6 LPNHDTNVVIQQAMPSPQSSSVITQAPSTNR THQLSSARLPNHDTNV TQAPSTNRQIGPVPGS R L P N R Q 2 1 3 1 0 4 0 0 1 2 1 0 1 0 4 5 3 0 0 3 0 0 31 0 3316.647 Q02930 Q02930 122 152 CREB5 Cyclic AMP-responsive element-binding protein 5 yes yes 3 2.7201E-05 70.028 By MS/MS By MS/MS 1 1 26984000 13477000 13506000 3565 1990 4034 9109;9110 8923;8924 8924 787 3821 2 LPNQYSVHK RKENSLCKLPNQYSVH PNQYSVHKTSSPLCTS K L P H K T 0 0 1 0 0 1 0 0 1 0 1 1 0 0 1 1 0 0 1 1 0 0 9 0 1084.5665 Q8IY85 Q8IY85 124 132 EFCAB13 EF-hand calcium-binding domain-containing protein 13 yes yes 2 0.028096 51.445 By matching By MS/MS 1 1 9363700 4423900 4939800 3566 2439 4035 9111;9112 8925 8925 4989 0 LPNSIASR IKGLSLERLPNSIASR LPNSIASRFRLTEREE R L P S R F 1 1 1 0 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 0 856.47667 H7C055;Q9ULT0;G5E9G4 H7C055 179 186 TTC7A Tetratricopeptide repeat protein 7A yes no 2 0.026237 66.92 By MS/MS By matching 1 1 15881000 8005900 7874700 3567 1268 4036 9113;9114 8926 8926 2352 1 LPNTYPNSSSPGPGGLGGSVHYATMAR SYIHYVFRLPNTYPNS VHYATMARSAVRPASL R L P A R S 2 1 2 0 0 0 0 5 1 0 2 0 1 0 4 4 2 0 2 1 0 0 27 0 2687.2762 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 855 881 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 0.00034419 67.217 By MS/MS By MS/MS 1 1 14970000 7203300 7766900 3568 2689 4037 9115;9116 8927;8928;8929 8928 5547;5548;5549 3 LPPPPGSPLGHSPTASPPPTAR HISPLAKKLPPPPGSP ASPPPTARKMFPGLAA K L P A R K 2 1 0 0 0 0 0 2 1 0 2 0 0 0 9 3 2 0 0 0 0 0 22 0 2130.1222 B9EGQ5;M0QXA7;O95785 B9EGQ5 321 342 WIZ Protein Wiz yes no 3 0.02724 43.116 By MS/MS 1 3902300 0 3902300 3569 612 4038 9117 8930 8930 1104;1105;1106;7006 0 LPQDDDRPADEYDQPWEWNR SPRLRESKLPQDDDRP DQPWEWNRVTIPALAA K L P N R V 1 2 1 5 0 2 2 0 0 0 1 0 0 0 3 0 0 2 1 0 0 0 20 1 2544.0942 Q15464 Q15464 325 344 SHB SH2 domain-containing adapter protein B yes yes 3 8.314E-05 120.82 By MS/MS By MS/MS 1 1 24277000 13881000 10396000 3570 2142 4039 9118;9119 8931;8932;8933;8934 8934 8354 4 LPQEFLQKLQMESPDLPKP LSLPMDIRLPQEFLQK ESPDLPKP________ R L P K P - 0 0 0 1 0 3 2 0 0 0 4 2 1 1 4 1 0 0 0 0 0 0 19 2 2237.1766 D6RGH0 D6RGH0 46 64 CDK18 yes yes 3 0.024519 53.565 By MS/MS By matching 1 1 26639000 15119000 11520000 3571 763 4040 9120;9121 8935 8935 1373 1 LPQMPGPPPPATASPPLPERSR L P S R 2 2 0 0 0 1 1 1 0 0 2 0 1 0 9 2 1 0 0 0 0 0 22 1 2292.2049 REV__Q8WUI4 yes no 3 0.024511 51.119 By MS/MS By matching 1 1 21361000 10584000 10777000 + 3572 3192 4041 9122;9123 8936 8936 6789;6790 0 LPQPPICTIDVYMIMVKCWMIDADSRPK SILEKGERLPQPPICT IDADSRPKFRELIIEF R L P P K F 1 1 0 3 2 1 0 0 0 4 1 2 3 0 4 1 1 1 1 2 0 0 28 2 3376.6514 Q504U8;E9PFD7;P00533 Q504U8 888 915 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor yes no 3 0.030586 47.807 By MS/MS 1 0 0 0 3573 864 4042 9124 8937 8937 325;326 1 LPQTSDDEKKDF QVHTRRPKLPQTSDDE SDDEKKDF________ K L P D F - 0 0 0 3 0 1 1 0 0 0 1 2 0 1 1 1 1 0 0 0 0 0 12 2 1421.6674 Q9GZT3 Q9GZT3 98 109 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes yes 2 3.3781E-06 129.17 By MS/MS By MS/MS 1 1 47103000 25384000 21719000 3574 2798 4043 9125;9126 8938;8939 8938 5841 2 LPQYSSLEIMLEKLR ETCMFMIKLPQYSSLE EIMLEKLRCAIHYRED K L P L R C 0 1 0 0 0 1 2 0 0 1 4 1 1 0 1 2 0 0 1 0 0 0 15 1 1818.9914 F8VWT9;J3KPF0;Q9Y4D8 F8VWT9 4258 4272 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes no 2 0.027935 56.29 By MS/MS 1 7221800 7221800 0 3575 1021 4044 9127 8940 8940 1910;1911 1 LPSAQTPNGTDYVASGK KQPPPSIRLPSAQTPN TDYVASGKSIQTPQSH R L P G K S 2 0 1 1 0 1 0 2 0 0 1 1 0 0 2 2 2 0 1 1 0 0 17 0 1704.8319 E7EPN9;Q9Y520;H7C5N8 E7EPN9 1962 1978 PRRC2C Protein PRRC2C yes no 2 0.0002719 97.352 By MS/MS 1 11469000 11469000 0 3576 802 4045 9128 8941 8941 30 7072 1 LPSGSGAASPTGSAVDIR QSGKTVIRLPSGSGAA TGSAVDIRAGAISASG R L P I R A 3 1 0 1 0 0 0 3 0 1 1 0 0 0 2 4 1 0 0 1 0 0 18 0 1641.8322 Q09666 Q09666 208 225 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0016208 87.157 By MS/MS By MS/MS 1 1 35507000 17814000 17693000 3577 2020 4046 9129;9130 8942;8943;8944 8942 3916;3917;3918 3 LPSLGNKEPPGQEK LQGNVNGRLPSLGNKE KEPPGQEKVQLKRKVT R L P E K V 0 0 1 0 0 1 2 2 0 0 2 2 0 0 3 1 0 0 0 0 0 0 14 1 1492.7886 Q9UPY5 Q9UPY5 24 37 SLC7A11 Cystine/glutamate transporter yes yes 3 0.00058966 88.427 By MS/MS By MS/MS 1 1 11451000 5232600 6218400 3578 3072 4047 9131;9132 8945;8946;8947 8945 6499 3 LPSLQGSK L P S K 0 0 0 0 0 1 0 1 0 0 2 1 0 0 1 2 0 0 0 0 0 0 8 0 828.47052 REV__Q66K64 yes yes 2 0.01099 88.177 By MS/MS 1 6616900 6616900 0 + 3579 3212 4048 9133 8948 8948 6810 1 LPSSPVYEDAASFK APQPTEERLPSSPVYE YEDAASFKAELSYRGP R L P F K A 2 0 0 1 0 0 1 0 0 0 1 1 0 1 2 3 0 0 1 1 0 0 14 0 1509.7351 Q14247;H0YEV2;H0YCD9 Q14247 415 428 CTTN Src substrate cortactin yes no 2;3 4.6433E-26 168.85 By MS/MS By MS/MS 5 4 1320000000 697850000 622170000 3580 2087 4049;4050 9134;9135;9136;9137;9138;9139;9140;9141;9142 8949;8950;8951;8952;8953;8954;8955;8956;8957;8958 8949 4120;4121;8337 10 LPSSSGLPAADVSPATAEEPLSPSTPTR PGLGTQPKLPSSSGLP LSPSTPTRRPPFTRGR K L P T R R 4 1 0 1 0 0 2 1 0 0 3 0 0 0 6 6 3 0 0 1 0 0 28 0 2734.3661 O43149 O43149 1497 1524 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 3 0.027195 52.059 By MS/MS 1 0 0 0 3581 1487 4051 9143 8959 8959 2780 1 LPSSSSEMGSQDGSPLR LKSARLQRLPSSSSEM SQDGSPLRETRKDPFS R L P L R E 0 1 0 1 0 1 1 2 0 0 2 0 1 0 2 6 0 0 0 0 0 0 17 0 1733.789 A2A2G5;Q9UJ14 A2A2G5 87 103 GGT7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain yes no 2 0.00029155 93.106 By MS/MS By MS/MS 2 2 53871000 24680000 29191000 3582 448 4052;4053 9144;9145;9146;9147 8960;8961;8962;8963 8960 174 838;839 4 LPVKWMALESLQTYRFTTK VQQHRHARLPVKWMAL QTYRFTTKSDVWSFGV R L P T K S 1 1 0 0 0 1 1 0 0 0 3 2 1 1 1 1 3 1 1 1 0 0 19 2 2311.2399 A0A087WZG2;Q04912;H2E272;H7C074 A0A087WZG2 1143 1161 MST1R Receptor protein-tyrosine kinase;Macrophage-stimulating protein receptor;Macrophage-stimulating protein receptor alpha chain;Macrophage-stimulating protein receptor beta chain yes no 3 0.016737 46.595 By matching By MS/MS 1 1 8355400 4348200 4007200 3583 140 4054 9148;9149 8964 8964 51 7995 1 LPVVISQCGEM TGPNNKPKLPVVISQC VISQCGEM________ K L P E M - 0 0 0 0 1 1 1 1 0 1 1 0 1 0 1 1 0 0 0 2 0 0 11 0 1231.5941 H0YEL5;O43447 H0YEL5 86 96 PPIH Peptidyl-prolyl cis-trans isomerase H yes no 2 0.00038468 124.08 By MS/MS 1 0 0 0 3584 1176 4055 9150 8965 8965 425 1 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR LKAELMERLQAALDDE LGGDSAGRSGAGLEQE R L Q G R S 5 2 1 4 0 1 3 7 0 0 4 0 1 0 2 2 0 0 0 0 0 0 32 1 3125.432 Q00839 Q00839 38 69 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3;4 1.8635E-11 94.841 By MS/MS By MS/MS 8 9 409040000 125550000 283490000 3585 1976 4056;4057;4058;4059;4060;4061 9151;9152;9153;9154;9155;9156;9157;9158;9159;9160;9161;9162;9163;9164;9165;9166;9167 8966;8967;8968;8969;8970;8971;8972;8973;8974;8975;8976;8977;8978;8979;8980 8975 96 781 3786;3787 14 LQAKESPQR CLAWAPARLQAKESPQ QAKESPQRKKRKSEAV R L Q Q R K 1 1 0 0 0 2 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1055.5724 Q15061 Q15061 72 80 WDR43 WD repeat-containing protein 43 yes yes 2 0.0076317 95.815 By MS/MS By matching 1 1 178380000 31605000 146780000 3586 2127 4062 9168;9169 8981;8982;8983 8983 4205 3 LQAKESPQRK CLAWAPARLQAKESPQ AKESPQRKKRKSEAVG R L Q R K K 1 1 0 0 0 2 1 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 10 2 1183.6673 Q15061 Q15061 72 81 WDR43 WD repeat-containing protein 43 yes yes 3 0.0035639 100.04 By MS/MS By matching 1 1 24448000 23646000 801340 3587 2127 4063 9170;9171 8984 8984 4205 1 LQALDTGWNELHKMWENRQNLLSQSHAYQQFLR QYMFLRQRLQALDTGW HAYQQFLRDTKQAEAF R L Q L R D 2 2 3 1 0 5 2 1 2 0 6 1 1 1 0 2 1 2 1 0 0 0 33 2 4054.002 A0A087WUZ3;Q01082 A0A087WUZ3 1144 1176 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 3 0.02131 49.486 By MS/MS 1 0 0 0 3588 67 4064 9172 8985 8985 24 123 1 LQALKEEPQTVPEMPGETPPLSPIDMESQER QMPVQHPRLQALKEEP IDMESQERIKAERKRM R L Q E R I 1 1 0 1 0 3 6 1 0 1 3 1 2 0 6 2 2 0 0 1 0 0 31 1 3475.6851 P05412 P05412 222 252 JUN Transcription factor AP-1 yes yes 3 0.00051987 62.116 By MS/MS By matching 1 1 165730000 82094000 83635000 3589 1642 4065 9173;9174 8986 8986 595;596 3101 1 LQDEANYHLYGSR NEPSLQSKLQDEANYH NYHLYGSRMDRQTKQQ K L Q S R M 1 1 1 1 0 1 1 1 1 0 2 0 0 0 0 1 0 0 2 0 0 0 13 0 1564.727 Q13546 Q13546 378 390 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 3 0.029389 45.347 By MS/MS 1 3749100 0 3749100 3590 2065 4066 9175 8987 8987 1 LQDISELLATGAGLSESEAEPDGDHNITELPQAVAGR EKFPNMSRLQDISELL LPQAVAGRGNMRAQQS R L Q G R G 5 1 1 3 0 2 5 4 1 2 5 0 0 0 2 3 2 0 0 1 0 0 37 0 3802.8497 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;C9J3W3 A8MV53 171 207 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 3 2.3194E-10 87.566 By MS/MS By MS/MS 1 1 177540000 48487000 129050000 3591 283 4067 9176;9177 8988;8989 8989 503;504;6920 2 LQDLSSNVLMTDKAK LISSDHCKLQDLSSNV VLMTDKAKWNIRAEED K L Q A K W 1 0 1 2 0 1 0 0 0 0 3 2 1 0 0 2 1 0 0 1 0 0 15 1 1661.8658 Q8NE28 Q8NE28 173 187 STKLD1 Serine/threonine kinase-like domain-containing protein STKLD1 yes yes 3 0.031272 41.644 By MS/MS 1 0 0 0 3592 2513 4068 9178 8990 8990 1013 1 LQDSFASETNLDFR RTLFKSRRLQDSFASE SETNLDFRSGLAIVSQ R L Q F R S 1 1 1 2 0 1 1 0 0 0 2 0 0 2 0 2 1 0 0 0 0 0 14 0 1641.7635 Q92621 Q92621 1936 1949 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.0059513 86.641 By MS/MS 1 4006900 4006900 0 3593 2590 4069 9179 8991 8991 7760 1 LQEDPNYSPQRFPNAQR LRSDIQKRLQEDPNYS QRFPNAQRAFADDP__ R L Q Q R A 1 2 2 1 0 3 1 0 0 0 1 0 0 1 3 1 0 0 1 0 0 0 17 1 2058.9872 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;H0Y710;H0Y4L1 A0A0G2JL47 1055 1071 BAT3;BAG6 Large proline-rich protein BAG6 yes no 3 0.017494 52.599 By MS/MS By MS/MS 1 1 64429000 43673000 20756000 3594 6 4070 9180;9181 8992;8993 8993 10 2 LQEEGGGSDEEETGSPSEDGMQSAR LIAEAKEKLQEEGGGS EDGMQSARTQARPREP K L Q A R T 1 1 0 2 0 2 6 5 0 0 1 0 1 0 1 4 1 0 0 0 0 0 25 0 2581.0358 Q13610 Q13610 43 67 PWP1 Periodic tryptophan protein 1 homolog yes yes 3 0.00086552 73.788 By MS/MS 1 0 0 0 3595 2071 4071 9182 8994 8994 4087 1 LQEKEDLQELNDR LSPTRITRLQEKEDLQ DLQELNDRLAVYIDRV R L Q D R L 0 1 1 2 0 2 3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 13 1 1628.8006 Q3BDU5;P02545 Q3BDU5 29 41 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.028091 65.956 By MS/MS 1 2616300 2616300 0 3596 1629 4072 9183 8995 8995 1 LQELESCSGLGSTSDDTDVR PDLKQEERLQELESCS TSDDTDVREVSSRPST R L Q V R E 0 1 0 3 1 1 2 2 0 0 3 0 0 0 0 4 2 0 0 1 0 0 20 0 2167.9539 H0Y7I9;C9IZ08;Q14C86;H0Y4E7;F8W9S7;B4DGD8 H0Y7I9 598 617 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2;3 1.67E-57 189.07 By MS/MS By MS/MS 2 2 97547000 50182000 47365000 3597 617 4073 9184;9185;9186;9187 8996;8997;8998 8996 1134;1135 3 LQELNAHIVVSDPEDITDCPR KLEELHHKLQELNAHI EDITDCPRTPDTPNND K L Q P R T 1 1 1 3 1 1 2 0 1 2 2 0 0 0 2 1 1 0 0 2 0 0 21 0 2420.1642 Q16513;B1AL79 Q16513 100 120 PKN2 Serine/threonine-protein kinase N2 yes no 3 0.0018608 63.625 By MS/MS 1 9701100 0 9701100 3598 2163 4074 9188 8999;9000 9000 4304 2 LQHSTSILR QQRTRRPKLQHSTSIL QHSTSILRKQAEEEAI K L Q L R K 0 1 0 0 0 1 0 0 1 1 2 0 0 0 0 2 1 0 0 0 0 0 9 0 1053.5931 A0A087WWK8;Q6DN90 A0A087WWK8 70 78 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2 0.023396 63.694 By MS/MS By matching 1 1 33812000 19256000 14556000 3599 91 4075 9189;9190 9001 9001 162 1 LQINSPPFDQPMSR IPDGYLEKLQINSPPF PFDQPMSRRSRRASLS K L Q S R R 0 1 1 1 0 2 0 0 0 1 1 0 1 1 3 2 0 0 0 0 0 0 14 0 1628.7981 F5H6Z0;Q00537;F8VQZ9 F5H6Z0 108 121 CDK17 Cyclin-dependent kinase 17 yes no 2 0.0035373 71.085 By MS/MS 1 4778000 0 4778000 3600 985 4076 9191 9002 9002 361 1847 1 LQLDNQYAVLENQK VSKNQALKLQLDNQYA YAVLENQKSSHSQYN_ K L Q Q K S 1 0 2 1 0 3 1 0 0 0 3 1 0 0 0 0 0 0 1 1 0 0 14 0 1674.8577 Q9UKY7;D6R9V8 Q9UKY7 238 251 CDV3 Protein CDV3 homolog yes no 3 0.00018572 98.253 By MS/MS By matching 1 1 13507000 9091900 4415000 3601 3034 4077 9192;9193 9003 9003 8500 1 LQLDSNDLRTKNK L Q N K 0 1 2 2 0 1 0 0 0 0 3 2 0 0 0 1 1 0 0 0 0 0 13 2 1543.8318 REV__E7EUN2 yes yes 3 0.0038239 69.864 By MS/MS 1 88359000 0 88359000 + 3602 3176 4078 9194 9004 9004 151 7961 1 LQLGTPPPLLAAR HGAAASERLQLGTPPP PPPLLAARLVPPRNLM R L Q A R L 2 1 0 0 0 1 0 1 0 0 4 0 0 0 3 0 1 0 0 0 0 0 13 0 1345.8082 Q9P2N5 Q9P2N5 443 455 RBM27 RNA-binding protein 27 yes yes 2 0.0029099 93.716 By matching By MS/MS 1 1 44603000 25793000 18810000 3603 2984 4079 9195;9196 9005 9005 7896 1 LQLQGLDLSSR SLELEVARLQLQGLDL QGLDLSSRSLLGIDTE R L Q S R S 0 1 0 1 0 2 0 1 0 0 4 0 0 0 0 2 0 0 0 0 0 0 11 0 1228.6776 P49454 P49454 1739 1749 CENPF Centromere protein F yes yes 2 4.4211E-14 166.62 By MS/MS By MS/MS 1 1 8827900 4446400 4381500 3604 1854 4080 9197;9198 9006;9007 9006 3565;3566 2 LQNELDMVKISKDPSK HDDATLARLQNELDMV KISKDPSKIPSWLKVN R L Q S K I 0 0 1 2 0 1 1 0 0 1 2 3 1 0 1 2 0 0 0 1 0 0 16 2 1843.9713 P49916 P49916 741 756 LIG3 DNA ligase 3 yes yes 2 0.013627 70.167 By MS/MS 1 42872000 42872000 0 3605 1865 4081 9199 9008 9008 3622 0 LQNNSLLPIK ESVSSGFKLQNNSLLP NNSLLPIKFSMHLDSL K L Q I K F 0 0 2 0 0 1 0 0 0 1 3 1 0 0 1 1 0 0 0 0 0 0 10 0 1138.671 Q9C0B2 Q9C0B2 1369 1378 CFAP74 Cilia- and flagella-associated protein 74 yes yes 2 0.002676 90.906 By MS/MS By MS/MS 1 1 258250000 136790000 121460000 3606 2789 4082 9200;9201 9009;9010 9010 131 5800 2 LQNSTLMAEFSK HSQEEDFRLQNSTLMA TLMAEFSKLCSQMEQL R L Q S K L 1 0 1 0 0 1 1 0 0 0 2 1 1 1 0 2 1 0 0 0 0 0 12 0 1367.6755 A0A075B793;Q4V328;A0A087WWF2;A0A087WW92;A0A087WZF5 A0A075B793 91 102 GRIPAP1 GRIP1-associated protein 1 yes no 2 0.025495 51.949 By MS/MS 1 0 0 0 3607 21 4083 9202 9011 9011 8 40 1 LQPERGSPK AEKHVTQRLQPERGSP QPERGSPKKCEAEEAE R L Q P K K 0 1 0 0 0 1 1 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1010.5509 S4R3H4;E7EQT4;Q9UKV3;A0A087WYN3 S4R3H4 665 673 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 0.0088412 96.756 By MS/MS 2 128270000 0 128270000 3608 810 4084 9203;9204 9012;9013;9014;9015 9014 1453 4 LQPFHSTELEDDAIYSVHVPAGLYR PGDELTTRLQPFHSTE HVPAGLYRIRKGVSAS R L Q Y R I 2 1 0 2 0 1 2 1 2 1 3 0 0 1 2 2 1 0 2 2 0 0 25 0 2856.4083 J3QRU8;Q9Y2X7;A0A0C4DGN6;J3QQI0 J3QRU8 531 555 GIT1 ARF GTPase-activating protein GIT1 yes no 3 3.7485E-07 98.3 By MS/MS By MS/MS 1 1 137230000 60507000 76723000 3609 1356 4085 9205;9206 9016;9017 9017 8168 2 LQPSSSPENSLDPFPPR RKFGAQFKLQPSSSPE SLDPFPPRILKEEPKG K L Q P R I 0 1 1 1 0 1 1 0 0 0 2 0 0 1 5 4 0 0 0 0 0 0 17 0 1866.9112 Q8WWM7;H3BUF6 Q8WWM7 554 570 ATXN2L Ataxin-2-like protein yes no 2;3 7.9283E-07 132.4 By MS/MS By MS/MS 2 2 89594000 43633000 45961000 3610 2564 4086 9207;9208;9209;9210 9018;9019;9020;9021;9022;9023;9024;9025 9022 5242;5243 8 LQPTETESEDKYMK IPTLQINKLQPTETES ESEDKYMKDTLNPNTV K L Q M K D 0 0 0 1 0 1 3 0 0 0 1 2 1 0 1 1 2 0 1 0 0 0 14 1 1697.7818 Q9BXT5 Q9BXT5 2571 2584 TEX15 Testis-expressed sequence 15 protein yes yes 2 0.00081898 89.26 By MS/MS By MS/MS 1 1 61080000 31155000 29925000 3611 2773 4087 9211;9212 9026;9027 9027 166 1103 5772;7835;7836 2 LQQELDDLTVDLDHQR KLEKTKNRLQQELDDL TVDLDHQRQVASNLEK R L Q Q R Q 0 1 0 4 0 3 1 0 1 0 4 0 0 0 0 0 1 0 0 1 0 0 16 0 1936.949 P35580 P35580 1425 1440 MYH10 Myosin-10 yes yes 3 0.014022 65.038 By MS/MS 1 0 0 0 3612 1796 4088 9213 9028 9028 1 LQQGAGLESPQGQPEPGAASPQR KTSPGSPRLQQGAGLE PGAASPQRQQDLHLES R L Q Q R Q 3 1 0 0 0 5 2 4 0 0 2 0 0 0 4 2 0 0 0 0 0 0 23 0 2302.1302 Q9H6F5 Q9H6F5 72 94 CCDC86 Coiled-coil domain-containing protein 86 yes yes 2;3 3.6305E-18 151.16 By MS/MS By MS/MS 4 4 1229500000 522200000 707320000 3613 2841 4089;4090 9214;9215;9216;9217;9218;9219;9220;9221 9029;9030;9031;9032;9033;9034;9035;9036;9037;9038 9033 5975;5976 10 LQQLEQDLTSDDALHCSQCGR SLTEQQGRLQQLEQDL LHCSQCGREPPTAQDG R L Q G R E 1 1 0 3 2 4 1 1 1 0 4 0 0 0 0 2 1 0 0 0 0 0 21 0 2473.0962 O95613 O95613 821 841 PCNT Pericentrin yes yes 2 0.025479 47.189 By MS/MS 1 3136300 0 3136300 3614 1600 4091 9222 9039 9039 3033 0 LQQLLPASQSTQLPCSSSPQETTQSRPMPPEAR QEPKPFDRLQQLLPAS RPMPPEARRLIVNKNA R L Q A R R 2 2 0 0 1 6 2 0 0 0 4 0 1 0 6 6 3 0 0 0 0 0 33 1 3649.7828 Q6W2J9;H7C2V9;A6NE70;H7C231;H7BZ37 Q6W2J9 1422 1454 BCOR BCL-6 corepressor yes no 3 0.023888 42.894 By MS/MS 1 6955700 0 6955700 3615 2343 4092 9223 9040 9040 941 4742 1 LQQQAALSPTTAPAVSSVSK QEQEIEQRLQQQAALS PAVSSVSKQETIMRHH R L Q S K Q 4 0 0 0 0 3 0 0 0 0 2 1 0 0 2 4 2 0 0 2 0 0 20 0 1983.0637 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 463 482 GATAD2B Transcriptional repressor p66-beta yes no 2;3 7.2679E-33 166.34 By MS/MS By MS/MS 2 2 224290000 102680000 121610000 3616 398 4093 9224;9225;9226;9227 9041;9042;9043;9044;9045 9045 731;6945 5 LQQQHSEQPPLQPSPVMTR MKTRRTTRLQQQHSEQ QPSPVMTRRGLRDSHS R L Q T R R 0 1 0 0 0 5 1 0 1 0 2 0 1 0 4 2 1 0 0 1 0 0 19 0 2200.1059 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 9 27 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 2;3 0.00010539 103.39 By MS/MS By MS/MS 4 4 541850000 269790000 272060000 3617 251 4094;4095 9228;9229;9230;9231;9232;9233;9234;9235 9046;9047;9048;9049;9050;9051;9052;9053 9052 101 436;6905 8 LQQTVPADASPDSK SPKAGTSKLQQTVPAD ADASPDSKCPICLDRF K L Q S K C 2 0 0 2 0 2 0 0 0 0 1 1 0 0 2 2 1 0 0 1 0 0 14 0 1455.7205 Q9NS56 Q9NS56 89 102 TOPORS E3 ubiquitin-protein ligase Topors yes yes 2 0.00016429 120.21 By MS/MS By MS/MS 1 1 35528000 18577000 16951000 3618 2912 4096 9236;9237 9054;9055 9054 6142 2 LQRLPSSSSEMGSQDGSPLR DSFLKSARLQRLPSSS SQDGSPLRETRKDPFS R L Q L R E 0 2 0 1 0 2 1 2 0 0 3 0 1 0 2 6 0 0 0 0 0 0 20 1 2131.0328 A2A2G5;Q9UJ14 A2A2G5 84 103 GGT7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain yes no 3 0.00012182 114.56 By MS/MS 1 14346000 14346000 0 3619 448 4097 9238 9056 9056 174 838;839 1 LQRPPSVDSIIR LQNKIASKLQRPPSVD PSVDSIIRSFIHESSM K L Q I R S 0 2 0 1 0 1 0 0 0 2 1 0 0 0 2 2 0 0 0 1 0 0 12 1 1379.7885 Q1MSJ5 Q1MSJ5 896 907 CSPP1 Centrosome and spindle pole-associated protein 1 yes yes 3 0.018858 54.393 By MS/MS 1 5484600 5484600 0 3620 2173 4098 9239 9057 9057 4322 1 LQSAGSAMPTSSSFK SPALKTTRLQSAGSAM MPTSSSFKHRIKEQED R L Q F K H 2 0 0 0 0 1 0 1 0 0 1 1 1 1 1 5 1 0 0 0 0 0 15 0 1497.7133 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1232 1246 CEP170 Centrosomal protein of 170 kDa yes no 2 0.00024373 105.28 By MS/MS By MS/MS 2 2 19910000 15118000 4792000 3621 1112 4099;4100 9240;9241;9242;9243 9058;9059;9060;9061;9062 9059 402 2095 5 LQSFDSPER RGNDRREKLQSFDSPE QSFDSPERKRIKYSRE K L Q E R K 0 1 0 1 0 1 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 9 0 1077.5091 E9PGM9;P78332 E9PGM9 888 896 RBM6 RNA-binding protein 6 yes no 2 0.0048346 98.182 By MS/MS By matching 1 1 56839000 27078000 29761000 3622 874 4101 9244;9245 9063 9063 1619 1 LQSIGTENTEENR STGSIAKRLQSIGTEN TENTEENRRFYRQLLL R L Q N R R 0 1 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 13 0 1489.7009 J3KPS3;P04075;H3BQN4;H3BUH7;H3BPS8;H3BMQ8;H3BR04 J3KPS3 44 56 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0034301 89.827 By MS/MS By MS/MS 1 1 7778000 4053400 3724600 3623 1327 4102 9246;9247 9064;9065 9065 2 LQSMESQVEEWYR TVNSQLKKLQSMESQV SQVEEWYREVGELQAQ K L Q Y R E 0 1 0 0 0 2 3 0 0 0 1 0 1 0 0 2 0 1 1 1 0 0 13 0 1683.7563 M0QZQ3;C9JY79;Q9H254 M0QZQ3 1452 1464 SPTBN4 Spectrin beta chain, non-erythrocytic 4 yes no 3 0.026485 44.616 By MS/MS By matching 1 1 45844000 30603000 15240000 3624 702 4103 9248;9249 9066 9066 1299 1 LQSPIKEENTTAVEEIGR YLQPFLAKLQSPIKEE TAVEEIGRTEMGNKNE K L Q G R T 1 1 1 0 0 1 4 1 0 2 1 1 0 0 1 1 2 0 0 1 0 0 18 1 2013.0378 S4R3Y0;S4R3P6;S4R3N2;A0A087X1L0;S4R2X9;Q9NS73 S4R3Y0 47 64 MBIP MAP3K12-binding inhibitory protein 1 yes no 2;3 0.00022407 108.75 By MS/MS By MS/MS 2 2 51329000 26637000 24692000 3625 167 4104 9250;9251;9252;9253 9067;9068;9069;9070 9069 271 4 LQSSLKKLAVNNIAGIEEVNMIK TATADDKKLQSSLKKL IEEVNMIKDDGTVIHF K L Q I K D 2 0 3 0 0 1 2 1 0 3 3 3 1 0 0 2 0 0 0 2 0 0 23 2 2511.4094 Q96K17;E9PL10 Q96K17 39 61 BTF3L4 Transcription factor BTF3 homolog 4;Transcription factor BTF3 yes no 3 0.028798 49.768 By MS/MS 1 0 0 0 3626 2676 4105 9254 9071 9071 1 LQSVQATGPSSPGR RVRELQTRLQSVQATG TGPSSPGRLTSTNRPI R L Q G R L 1 1 0 0 0 2 0 2 0 0 1 0 0 0 2 3 1 0 0 1 0 0 14 0 1383.7106 A0A096LNU0;D6REY2;P23508 A0A096LNU0 284 297 MCC Colorectal mutant cancer protein yes no 2 0.0010063 101.45 By MS/MS By MS/MS 1 1 26400000 15793000 10607000 3627 179 4106 9255;9256 9072;9073 9072 298;299 2 LQSWDNLLNNPK L Q P K 0 0 3 1 0 1 0 0 0 0 3 1 0 0 1 1 0 1 0 0 0 0 12 0 1440.7361 REV__O00232 yes yes 2 0.028373 60.255 By matching By MS/MS 1 2 14436000 4247200 10189000 + 3628 3196 4107 9257;9258;9259 9074 9074 6794 1 LQSWEETWSLIPEK RSGPVSNRLQSWEETW TWSLIPEKGLPEDDPD R L Q E K G 0 0 0 0 0 1 3 0 0 1 2 1 0 0 1 2 1 2 0 0 0 0 14 0 1744.8672 K7EK04;X6R3U4;Q7Z736 K7EK04 119 132 PLEKHH3 Pleckstrin homology domain-containing family H member 3 yes no 2 1.288E-20 157.37 By MS/MS 1 13240000 13240000 0 3629 1376 4108 9260 9075;9076 9075 2543 2 LQTPNTFPK TPQAKKIKLQTPNTFP QTPNTFPKRKKGEKRA K L Q P K R 0 0 1 0 0 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 0 0 9 0 1044.5604 A0A0A0MRM9;Q14978 A0A0A0MRM9 614 622 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.001834 85.813 By MS/MS By MS/MS 1 1 94909000 45444000 49466000 3630 222 4109 9261;9262 9077;9078;9079 9078 6894;6895 3 LQTPNTFPKR TPQAKKIKLQTPNTFP TPNTFPKRKKGEKRAS K L Q K R K 0 1 1 0 0 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 0 0 10 1 1200.6615 A0A0A0MRM9;Q14978 A0A0A0MRM9 614 623 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.00076922 96.604 By MS/MS By MS/MS 1 1 16440000 7770200 8669700 3631 222 4110 9263;9264 9080;9081;9082 9081 6894;6895 3 LQTSSVLVSGLR LGHEAMKRLQTSSVLV SVLVSGLRGLGVEIAK R L Q L R G 0 1 0 0 0 1 0 1 0 0 3 0 0 0 0 3 1 0 0 2 0 0 12 0 1258.7245 P22314;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3;Q5JRS2 P22314 70 81 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 0.0085809 88.134 By MS/MS By MS/MS 1 1 7722000 4136700 3585400 3632 1747 4111 9265;9266 9083;9084 9084 0 LQTTDNLLPMSPEEFDEVSR ________________ EEFDEVSRIVGSVEFD R L Q S R I 0 1 1 2 0 1 3 0 0 0 3 0 1 1 2 2 2 0 0 1 0 0 20 0 2320.0893 H7BZ88;P42224 H7BZ88 7 26 STAT1 Signal transducer and activator of transcription 1-alpha/beta yes no 2;3 6.3229E-05 101.92 By MS/MS By MS/MS 2 1 25960000 18005000 7955200 3633 1265 4112 9267;9268;9269 9085;9086;9087;9088 9086 457 2349 4 LQVYEGGGQPPPQDLPGSPK EVAALRKKLQVYEGGG QDLPGSPKSGPPPEHL K L Q P K S 0 0 0 1 0 3 1 4 0 0 2 1 0 0 5 1 0 0 1 1 0 0 20 0 2063.0324 A0A0C4DGP2;A0A0C4DGP5;Q86Y91 A0A0C4DGP2 387 406 KIF18B Kinesin-like protein;Kinesin-like protein KIF18B yes no 2 0.001306 80.412 By MS/MS By MS/MS 1 1 23538000 12835000 10702000 3634 323 4113 9270;9271 9089;9090 9090 566 2 LQWDGSSDLSPSDSGSSK DSQALISRLQWDGSSD PSDSGSSKT_______ R L Q S K T 0 0 0 3 0 1 0 2 0 0 2 1 0 0 1 7 0 1 0 0 0 0 18 0 1851.8123 K7EJK2;K7ENU1;K7EKG9;Q14CW9 K7EJK2 54 71 ATXN7L3 Ataxin-7-like protein 3 yes no 2 0.023421 83.666 By MS/MS By matching 1 1 23879000 9166700 14713000 3635 1371 4114 9272;9273 9091 9091 2538 0 LREQYGLGPYEAVTPLTK LSLEQGNRLREQYGLG EAVTPLTKAADISLDN R L R T K A 1 1 0 0 0 1 2 2 0 0 3 1 0 0 2 0 2 0 2 1 0 0 18 1 2034.0786 Q12888;A6NNK5;H7BZY0 Q12888 1596 1613 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.0069476 62.707 By matching By MS/MS 1 1 11738000 7305000 4433100 3636 2031 4115 9274;9275 9092 9092 7535;7536 1 LRLSPSPTSQR LLEGEEERLRLSPSPT SPSPTSQRSRGRASSH R L R Q R S 0 2 0 0 0 1 0 0 0 0 2 0 0 0 2 3 1 0 0 0 0 0 11 1 1240.6888 Q3BDU5;P02545;A0A0C4DGC5;Q5TCI8 Q3BDU5 387 397 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.018056 55.899 By MS/MS By MS/MS 1 1 6152400 0 6152400 3637 1629 4116 9276;9277 9093;9094 9094 3076 2 LRPKSPPPK GCTEEIERLRPKSPPP RPKSPPPKSKSDRGGG R L R P K S 0 1 0 0 0 0 0 0 0 0 1 2 0 0 4 1 0 0 0 0 0 0 9 2 1018.6287 Q9HCE5 Q9HCE5 395 403 METTL14 N6-adenosine-methyltransferase subunit METTL14 yes yes 3 0.016795 70.908 By MS/MS By MS/MS 2 2 39246000 9752700 29494000 3638 2874 4117 9278;9279;9280;9281 9095;9096 9095 6053 2 LRPQSAQSSFPPSPGPSPDVQLATLAQR MKRQRHPRLRPQSAQS QLATLAQRVKEVLPHV R L R Q R V 3 2 0 1 0 4 0 1 0 0 3 0 0 1 6 5 1 0 0 1 0 0 28 1 2931.5203 Q9Y679 Q9Y679 342 369 AUP1 Ancient ubiquitous protein 1 yes yes 3 0.00033527 66.556 By MS/MS By MS/MS 3 2 56968000 33529000 23439000 3639 3144 4118 9282;9283;9284;9285;9286 9097;9098;9099;9100 9100 6727 4 LRSADSENALSVQER QYLDPRGRLRSADSEN NALSVQERNVPTKSPS R L R E R N 2 2 1 1 0 1 2 0 0 0 2 0 0 0 0 3 0 0 0 1 0 0 15 1 1673.8333 J3KRN4;J3QRB6;Q99759 J3KRN4 331 345 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 3 0.011171 58.658 By MS/MS 1 4494300 4494300 0 3640 1335 4119 9287 9101 9101 2473 1 LRSPFLQK ISSPQPGKLRSPFLQK LRSPFLQKQLTQPETH K L R Q K Q 0 1 0 0 0 1 0 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 8 1 987.58655 H0Y5J4;Q9UJU6;B4DDD6 H0Y5J4 210 217 DBNL Drebrin-like protein yes no 2 0.024543 80.706 By MS/MS By matching 1 1 35450000 20489000 14962000 3641 1129 4120 9288;9289 9102 9102 2149 1 LRSPPEALVQGR EQIHPRSRLRSPPEAL PEALVQGRYPHIKDGE R L R G R Y 1 2 0 0 0 1 1 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 12 1 1321.7466 Q9UHB6;F8VRN8 Q9UHB6 130 141 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0088123 61.186 By MS/MS By MS/MS 1 1 12894000 5259100 7634700 3642 3003 4121 9290;9291 9103;9104 9104 6321 2 LRSPSNDSAHR NRSHTSGRLRSPSNDS PSNDSAHRSGDDQSGR R L R H R S 1 2 1 1 0 0 0 0 1 0 1 0 0 0 1 3 0 0 0 0 0 0 11 1 1238.6116 Q5T200 Q5T200 1206 1216 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 0.01667 61.409 By MS/MS 1 6324200 0 6324200 3643 2238 4122 9292 9105 9105 4477 0 LRVSLGTR HYKAREPRLRVSLGTR LRVSLGTRGRRSSHT_ R L R T R G 0 2 0 0 0 0 0 1 0 0 2 0 0 0 0 1 1 0 0 1 0 0 8 1 900.5505 A0A0J9YX63;Q96CW5 A0A0J9YX63 198 205 TUBGCP3 Gamma-tubulin complex component 3 yes no 2 0.022644 84.198 By matching By MS/MS 1 1 16524000 9252800 7271500 3644 372 4123 9293;9294 9106 9106 690 1 LSAERTSQESELNNMQDLVEDFKK MLKKQVDRLSAERTSQ DLVEDFKKKYEDEINK R L S K K K 1 1 2 2 0 2 4 0 0 0 3 2 1 1 0 3 1 0 0 1 0 0 24 2 2810.3393 CON__Q3TTY5 CON__Q3TTY5 264 287 yes yes 3 0.026231 52.095 By MS/MS 1 0 0 0 + 3645 718 4124 9295 9107 9107 277 1324 1 LSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK AESAHEPRLSAEYEKV ATEVFDEKIEVHQEEV R L S E K I 3 0 0 1 0 2 9 2 0 0 3 3 0 1 4 5 1 0 1 3 0 0 38 2 4132.9852 Q02952 Q02952 370 407 AKAP12 A-kinase anchor protein 12 yes yes 4 0.00027404 55.425 By MS/MS By MS/MS 1 1 46926000 24716000 22210000 3646 1991 4125 9296;9297 9108;9109 9109 8317 2 LSAISLGQGQGPRAEAMMRSSIER EEMKFSKKLSAISLGQ MMRSSIERGKWVFFQN K L S E R G 3 3 0 0 0 2 2 3 0 2 2 0 2 0 1 4 0 0 0 0 0 0 24 2 2544.2901 H7C563;Q9P2D7 H7C563 600 623 DNAH1 Dynein heavy chain 1, axonemal yes no 3 0.021316 41.818 By MS/MS 1 27135000 27135000 0 3647 1289 4126 9298 9110 9110 463;464 2386;2387 1 LSAITMALQYGSESEEDAALAAAR KRAVQGGRLSAITMAL DAALAAARYEEGESEA R L S A R Y 7 1 0 1 0 1 3 1 0 1 3 0 1 0 0 3 1 0 1 0 0 0 24 0 2467.1901 E7EVG2;Q86U86;H0Y5B5 E7EVG2 342 365 PBRM1 Protein polybromo-1 yes no 2;3 5.7247E-37 164.91 By MS/MS By MS/MS 1 3 60059000 18179000 41880000 3648 829 4127;4128 9299;9300;9301;9302 9111;9112;9113;9114 9113 316 1545;1546 4 LSAMLVPVTPEVKPK EPKRRSARLSAMLVPV VTPEVKPKRTSSSRKM R L S P K R 1 0 0 0 0 0 1 0 0 0 2 2 1 0 3 1 1 0 0 3 0 0 15 1 1607.9321 Q5JSK7;Q5JSK8;Q5JSL0;Q5JSK6;P82970 Q5JSK7 23 37 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 yes no 2;3 0.00014067 97.502 By MS/MS By MS/MS 2 2 25855000 14065000 11790000 3649 1966 4129 9303;9304;9305;9306 9115;9116;9117;9118 9117 774 7508 3 LSASSEDISER GKGLCATKLSASSEDI SSEDISERLASISVGP K L S E R L 1 1 0 1 0 0 2 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0 11 0 1192.5572 Q13233 Q13233 920 930 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 yes yes 2 0.0021223 91.093 By MS/MS By MS/MS 1 1 13425000 8714500 4710700 3650 2050 4130 9307;9308 9119;9120 9119 4023;4024 2 LSASTASELSPK LPASPRARLSASTASE TASELSPKSKARPSSP R L S P K S 2 0 0 0 0 0 1 0 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1189.619 Q3KQU3;H0YF21 Q3KQU3 451 462 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.00011006 121.92 By MS/MS By MS/MS 1 1 88342000 41651000 46690000 3651 2187 4131 9309;9310 9121;9122;9123;9124 9121 4353 4 LSATEPELGDYR ALHTRLARLSATEPEL EPELGDYRELVLDCRF R L S Y R E 1 1 0 1 0 0 2 1 0 0 2 0 0 0 1 1 1 0 1 0 0 0 12 0 1349.6463 A0A087WZG2;Q04912;J3KQS7 A0A087WZG2 283 294 MST1R Receptor protein-tyrosine kinase;Macrophage-stimulating protein receptor;Macrophage-stimulating protein receptor alpha chain;Macrophage-stimulating protein receptor beta chain yes no 2 0.026774 59.116 By MS/MS 1 11364000 11364000 0 3652 140 4132 9311 9125 9125 0 LSCIGSPIVSPR DCIKDYERLSCIGSPI GSPIVSPRIVQLETES R L S P R I 0 1 0 0 1 0 0 1 0 2 1 0 0 0 2 3 0 0 0 1 0 0 12 0 1284.686 Q9UKT4 Q9UKT4 93 104 FBXO5 F-box only protein 5 yes yes 2 0.00046453 111.81 By MS/MS 1 4983600 0 4983600 3653 3029 4133 9312 9126;9127 9127 6384 2 LSCMANSVIKNLQSR QLFEMHEKLSCMANSV VIKNLQSRWRSPSHEN K L S S R W 1 1 2 0 1 1 0 0 0 1 2 1 1 0 0 3 0 0 0 1 0 0 15 1 1719.876 Q5UIP0;H7C2B5 Q5UIP0 2448 2462 RIF1 Telomere-associated protein RIF1 yes no 2 0.025539 47 By matching By MS/MS 1 1 5549500 3348100 2201400 3654 2261 4134 9313;9314 9128 9128 903 4525;4526 0 LSDDFDSPVKGPLCK PLKKREIKLSDDFDSP PVKGPLCKSVTPTKEF K L S C K S 0 0 0 3 1 0 0 1 0 0 2 2 0 1 2 2 0 0 0 1 0 0 15 1 1676.808 Q96T23;H0YER1;H0YCN2 Q96T23 391 405 RSF1 Remodeling and spacing factor 1 yes no 3 0.0079659 61.657 By MS/MS By matching 1 1 11548000 5489600 6058500 3655 2714 4135 9315;9316 9129 9129 5617 1 LSDSPSMGR RYDSVNEKLSDSPSMG SDSPSMGRYRSVNGGP K L S G R Y 0 1 0 1 0 0 0 1 0 0 1 0 1 0 1 3 0 0 0 0 0 0 9 0 948.43348 A0A087X2C4;H0YAH0;O60245 A0A087X2C4 286 294 PCDH7 Protocadherin-7 yes no 2 0.016565 69.65 By MS/MS 1 3632400 0 3632400 3656 174 4136 9317 9130 9130 284 1 LSDSYSNTLPVR SPPQSQSKLSDSYSNT YSNTLPVRKSVTPKNS K L S V R K 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 3 1 0 1 1 0 0 12 0 1350.6779 I3L3C6;Q9UQB8;I3L0Y9;B4DWA1;I3L4C2 I3L3C6 14 25 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 2 2.5994E-09 141.65 By MS/MS By MS/MS 2 1 22695000 13349000 9346000 3657 1312 4137 9318;9319;9320 9131;9132;9133 9131 7243;8163 2 LSEAVWQPEEHYSSSPEK LDEKVDTKLSEAVWQP HYSSSPEKILSPFSQK K L S E K I 1 0 0 0 0 1 4 0 1 0 1 1 0 0 2 4 0 1 1 1 0 0 18 0 2101.9593 F5H269;Q9Y485 F5H269 904 921 DMXL1 DmX-like protein 1 yes no 3 0.0029957 64.87 By MS/MS By MS/MS 1 1 17158000 9031800 8126500 3658 965 4138 9321;9322 9134;9135 9134 1816;1817 2 LSEEAECPNPSTPSK REQEMFFKLSEEAECP PNPSTPSKAAKFFPYS K L S S K A 1 0 1 0 1 0 3 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 15 0 1644.7301 O94804 O94804 941 955 STK10 Serine/threonine-protein kinase 10 yes yes 2 6.5644E-54 197.7 By MS/MS By MS/MS 1 1 72973000 35616000 37356000 3659 1567 4139 9323;9324 9136;9137 9137 2968;7349 2 LSEGSQPAEEEEDQETPSR VRQARAAKLSEGSQPA EDQETPSRNLRVRADR K L S S R N 1 1 0 1 0 2 6 1 0 0 1 0 0 0 2 3 1 0 0 0 0 0 19 0 2116.9033 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 181 199 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0020855 82.01 By MS/MS By MS/MS 1 1 11479000 6349400 5129600 3660 810 4140 9325;9326 9138;9139 9139 1445;1446 1 LSEPSLPIEDSQDLYNASPEPK SASKSSGKLSEPSLPI YNASPEPKTLFLGAGD K L S P K T 1 0 1 2 0 1 3 0 0 1 3 1 0 0 4 4 0 0 1 0 0 0 22 0 2428.1646 Q9HAW4;E7ESG2 Q9HAW4 829 850 CLSPN Claspin yes no 2;3 0.00042139 84.975 By MS/MS By MS/MS 1 1 7821200 7821200 0 3661 2861 4141;4142 9327;9328 9140;9141 9140 6024 2 LSESPASLPSCPPVETALINQR PTEIAGQKLSESPASL ETALINQRDLADALLD K L S Q R D 2 1 1 0 1 1 2 0 0 1 3 0 0 0 4 4 1 0 0 1 0 0 22 0 2365.1948 Q2TAZ0 Q2TAZ0 1260 1281 ATG2A Autophagy-related protein 2 homolog A yes yes 3 0.014667 47.499 By matching By MS/MS 1 1 9914000 6106300 3807600 3662 2182 4143 9329;9330 9142 9142 4338;4339 1 LSEVIYEPFQLLSK KIEDTKRRLSEVIYEP EPFQLLSKIIGEESGS R L S S K I 0 0 0 0 0 1 2 0 0 1 3 1 0 1 1 2 0 0 1 1 0 0 14 0 1664.9025 A0A087WVA8;Q8IWB9 A0A087WVA8 294 307 TEX2 Testis-expressed sequence 2 protein yes no 2 1.3537E-06 127.87 By MS/MS By MS/MS 1 1 13199000 7147700 6051600 3663 74 4144 9331;9332 9143;9144 9143 7981 2 LSFASETPLEKEPHSPADQPEQQAESTLTSAETR ACTSSFLRLSFASETP TLTSAETRGSKKKKKL R L S T R G 4 1 0 1 0 3 6 0 1 0 3 1 0 1 4 5 4 0 0 0 0 0 34 1 3710.7548 Q9H2Y7;A0A0C4DGM5 Q9H2Y7 1314 1347 ZNF106 Zinc finger protein 106 yes no 4 1.0447E-09 85.937 By MS/MS By MS/MS 1 1 52684000 31249000 21435000 3664 2824 4145 9333;9334 9145;9146 9146 5921 2 LSFDSSPTSSTDGHSSYGLDSGFCTISR YDSLVVGKLSFDSSPT SGFCTISRLPRSEKPH K L S S R L 0 1 0 3 1 0 0 3 1 1 2 0 0 2 1 9 3 0 1 0 0 0 28 0 2967.2829 Q00587 Q00587 138 165 CDC42EP1 Cdc42 effector protein 1 yes yes 3 8.5611E-07 80.477 By MS/MS By MS/MS 1 2 71219000 37877000 33342000 3665 1974 4146;4147 9335;9336;9337 9147;9148;9149 9147 3779;3780;3781 3 LSFRSTIYGSR PVVQEPRRLSFRSTIY RSTIYGSRLRIRNLDT R L S S R L 0 2 0 0 0 0 0 1 0 1 1 0 0 1 0 3 1 0 1 0 0 0 11 1 1285.6779 A0A0A0MTJ5;Q01973 A0A0A0MTJ5 50 60 ROR1 Tyrosine-protein kinase transmembrane receptor;Tyrosine-protein kinase transmembrane receptor ROR1 yes no 2 0.010627 67.93 By MS/MS By matching 1 1 13324000 6935000 6389100 3666 275 4148 9338;9339 9150 9150 482;8021 1 LSFSMSLLSR KVELDRVKLSFSMSLL FSMSLLSRFVDGLTFK K L S S R F 0 1 0 0 0 0 0 0 0 0 3 0 1 1 0 4 0 0 0 0 0 0 10 0 1139.6009 Q5JR04;Q9HCE1 Q5JR04 371 380 MOV10 Putative helicase MOV-10 yes no 2 0.0049383 86.911 By MS/MS 1 0 0 0 3667 2218 4149 9340 9151 9151 886 4432 1 LSGEMPPASPSFPR KDRIFPDRLSGEMPPA PASPSFPRNKRTDANE R L S P R N 1 1 0 0 0 0 1 1 0 0 1 0 1 1 4 3 0 0 0 0 0 0 14 0 1471.7129 Q96JM7 Q96JM7 600 613 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 yes yes 2;3 1.0289E-05 110.53 By MS/MS By MS/MS 3 3 121210000 59678000 61530000 3668 2675 4150;4151 9341;9342;9343;9344;9345;9346 9152;9153;9154;9155;9156;9157;9158 9158 1064 5531 6 LSGFSFKK FSFKKSFKLSGFSFKK LSGFSFKKNKKEAGEG K L S K K N 0 0 0 0 0 0 0 1 0 0 1 2 0 2 0 2 0 0 0 0 0 0 8 1 912.5069 P29966 P29966 166 173 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.010596 102.06 By MS/MS By MS/MS 1 1 3029500000 1707000000 1322400000 3669 1776 4152 9347;9348 9159;9160 9160 3361;3362 2 LSGINEIPRPFSPPVTSNTSPPPAAPLAR RPKLTSGKLSGINEIP PPAAPLARAESSSSIS K L S A R A 3 2 2 0 0 0 1 1 0 2 2 0 0 1 8 4 2 0 0 1 0 0 29 1 2982.5927 Q0JRZ9 Q0JRZ9 477 505 FCHO2 F-BAR domain only protein 2 yes yes 3 8.1241E-07 80.832 By MS/MS 1 10301000 0 10301000 3670 2021 4153 9349 9161;9162 9161 3920;3921 2 LSGLAAPDYTRLSPAK VGRPRLEKLSGLAAPD YTRLSPAKIVLRRHLS K L S A K I 3 1 0 1 0 0 0 1 0 0 3 1 0 0 2 2 1 0 1 0 0 0 16 1 1658.8992 Q8TEK3 Q8TEK3 763 778 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 3 0.0104 77.031 By MS/MS By MS/MS 1 1 0 0 0 3671 2544 4154 9350;9351 9163;9164 9163 7747 2 LSGLANVVLHELSGDDDTDQNMR ________________ DDTDQNMRAPLDPELH R L S M R A 1 1 2 4 0 1 1 2 1 0 4 0 1 0 0 2 1 0 0 2 0 0 23 0 2498.1707 Q14789;E7EU81;F8WF12;C9J8Q0 Q14789 5 27 GOLGB1 Golgin subfamily B member 1 yes no 3 0.023874 50.956 By MS/MS 1 6994000 0 6994000 3672 2108 4155 9352 9165 9165 840 0 LSGLSFK FSFKKPFKLSGLSFKR KLSGLSFKRNRKEGGG K L S F K R 0 0 0 0 0 0 0 1 0 0 2 1 0 1 0 2 0 0 0 0 0 0 7 0 750.42759 P49006 P49006 100 106 MARCKSL1 MARCKS-related protein yes yes 2 0.025716 93.598 By MS/MS 1 361780000 0 361780000 3673 1849 4156 9353 9166 9166 3556;3557 1 LSGLSFKR FSFKKPFKLSGLSFKR LSGLSFKRNRKEGGGD K L S K R N 0 1 0 0 0 0 0 1 0 0 2 1 0 1 0 2 0 0 0 0 0 0 8 1 906.5287 P49006 P49006 100 107 MARCKSL1 MARCKS-related protein yes yes 2 0.024341 73.841 By MS/MS By MS/MS 1 1 3683900000 1990500000 1693400000 3674 1849 4157 9354;9355 9167;9168 9168 3556;3557 2 LSHLQMHSRK GCNKRYFKLSHLQMHS HLQMHSRKHT______ K L S R K H 0 1 0 0 0 1 0 0 2 0 2 1 1 0 0 2 0 0 0 0 0 0 10 1 1235.6557 E9PPW3;H0YED9;A0A0A0MT54;H0Y7K5;J3KNN9;P19544 E9PPW3 14 23 WT1 Wilms tumor protein yes no 2 0.023496 47.603 By matching By MS/MS 1 1 7636700 4138000 3498800 3675 265 4158 9356;9357 9169 9169 109 462 1 LSILYPATTGR FGPDKKLKLSILYPAT LYPATTGRNFDEILRV K L S G R N 1 1 0 0 0 0 0 1 0 1 2 0 0 0 1 1 2 0 1 0 0 0 11 0 1190.6659 P30041 P30041 145 155 PRDX6 Peroxiredoxin-6 yes yes 2 0.029331 70.028 By MS/MS 1 3987500 0 3987500 3676 1777 4159 9358 9170 9170 1 LSIYGRSR KYQNAELRLSIYGRSR LSIYGRSRDEWDKLAR R L S S R D 0 2 0 0 0 0 0 1 0 1 1 0 0 0 0 2 0 0 1 0 0 0 8 1 950.52976 H0Y360;Q01433 H0Y360 512 519 AMPD2 AMP deaminase 2 yes no 2 0.023472 52.403 By MS/MS 1 0 0 0 3677 1114 4160 9359 9171 9171 2104 1 LSLEGDHSTPPSAYGSVK TVHEILCKLSLEGDHS PSAYGSVKAYTNFDAE K L S V K A 1 0 0 1 0 0 1 2 1 0 2 1 0 0 2 4 1 0 1 1 0 0 18 0 1843.8952 H0YNB8;H0YMD9;H0YKN4;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;A6NMY6 H0YNB8 11 28 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 2;3 6.8455E-05 124.81 By MS/MS By MS/MS 2 1 78764000 50774000 27990000 3678 482 4161 9360;9361;9362 9172;9173;9174;9175 9175 873;8053 4 LSLFSDGDSSESEDTLSSSER SSTVTSPRLSLFSDGD DTLSSSERSKGSGSRP R L S E R S 0 1 0 3 0 0 3 1 0 0 3 0 0 1 0 8 1 0 0 0 0 0 21 0 2246.9663 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63 M0QZ79 74 94 VRK3 Inactive serine/threonine-protein kinase VRK3 yes no 2 0.00015041 115.74 By MS/MS By MS/MS 2 1 30397000 16863000 13534000 3679 1399 4162;4163 9363;9364;9365 9176;9177;9178 9176 2572;2573;2574 3 LSLLKQMQVSSAWTPCAVSR RARNQLSKLSLLKQMQ WTPCAVSRKEKQRVHL K L S S R K 2 1 0 0 1 2 0 0 0 0 3 1 1 0 1 4 1 1 0 2 0 0 20 1 2261.166 H7C575;H7C4W6 H7C575 84 103 ATP11B Phospholipid-transporting ATPase yes no 3 0.0069783 72.805 By MS/MS By MS/MS 1 1 25960000 15017000 10943000 3680 1288 4164 9366;9367 9179;9180 9179 2383;2384;2385;7235 0 LSLNIDPDAK DRIERMLRLSLNIDPD LNIDPDAKVEEEPEEE R L S A K V 1 0 1 2 0 0 0 0 0 1 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1084.5764 P14625;H0YIV0 P14625 745 754 HSP90B1 Endoplasmin yes no 2 0.0059423 89.047 By MS/MS By MS/MS 1 1 5436700 2210600 3226100 3681 1701 4165 9368;9369 9181;9182 9182 2 LSLPGLLSQVSPR ETEGGSRRLSLPGLLS LLSQVSPRLLRKAARV R L S P R L 0 1 0 0 0 1 0 1 0 0 4 0 0 0 2 3 0 0 0 1 0 0 13 0 1365.798 Q96Q42 Q96Q42 482 494 ALS2 Alsin yes yes 2 0.00149 90.853 By MS/MS 1 4443800 4443800 0 3682 2700 4166 9370 9183 9183 5571 1 LSLSPLR SPAEGSERLSLSPLRG RLSLSPLRGGEAGPDA R L S L R G 0 1 0 0 0 0 0 0 0 0 3 0 0 0 1 2 0 0 0 0 0 0 7 0 784.48069 Q66K74 Q66K74 654 660 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 2 0.019375 107.69 By MS/MS By MS/MS 1 1 141790000 78809000 62977000 3683 2289 4167 9371;9372 9184;9185 9185 4608 2 LSLTRSPVSPLAAQGIPLPAQLTK AEGGNMSRLSLTRSPV PLPAQLTKSNAPVHID R L S T K S 3 1 0 0 0 2 0 1 0 1 5 1 0 0 4 3 2 0 0 1 0 0 24 1 2457.4319 K7EIF1;K7EPF0;K7EQS3;K7EM48;K7EN63;Q96SI1 K7EIF1 30 53 KCTD15 BTB/POZ domain-containing protein KCTD15 yes no 3 0.0011625 66.501 By MS/MS 1 5016000 0 5016000 3684 1366 4168 9373 9186 9186 2535 1 LSLTSDPEEGDPLALGPESPGEPQPPQLK PLQESSTRLSLTSDPE EPQPPQLKKDDVTSST R L S L K K 1 0 0 2 0 2 4 3 0 0 5 1 0 0 7 3 1 0 0 0 0 0 29 0 2997.4819 A0A0A0MT60;Q5T1M5 A0A0A0MT60 1121 1149 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 3 3.3301E-10 96.723 By MS/MS By MS/MS 1 1 38871000 20222000 18649000 3685 266 4169 9374;9375 9187;9188 9187 466 2 LSLVIRSPSLLQSGAK ALARKKARLSLVIRSP SLLQSGAKKKAQVRKA R L S A K K 1 1 0 0 0 1 0 1 0 1 4 1 0 0 1 4 0 0 0 1 0 0 16 1 1667.9934 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 1302 1317 MYBBP1A Myb-binding protein 1A yes no 3 0.015294 68.919 By MS/MS By MS/MS 1 1 0 0 0 3686 2741 4170 9376;9377 9189;9190 9189 5690 2 LSMEDSKSPPPK GEFIQQLKLSMEDSKS DSKSPPPKATEEKKSL K L S P K A 0 0 0 1 0 0 1 0 0 0 1 2 1 0 3 3 0 0 0 0 0 0 12 1 1314.649 Q9NQG5 Q9NQG5 127 138 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 2;3 0.00054742 113.07 By MS/MS By MS/MS 2 3 19752000 9011200 10741000 3687 2894 4171 9378;9379;9380;9381;9382 9191;9192;9193;9194 9194 1143 6092 4 LSMLSQEIQTLK ETPTQSDRLSMLSQEI SQEIQTLKRSSTGSYE R L S L K R 0 0 0 0 0 2 1 0 0 1 3 1 1 0 0 2 1 0 0 0 0 0 12 0 1389.7538 Q7Z674;F8W6C0;G3V0F5;Q9UHY8 Q7Z674 20 31 DKFZp779C2259;FEZ2 Fasciculation and elongation protein zeta-2 yes no 2 0.031627 50.473 By MS/MS 1 0 0 0 3688 1031 4172 9383 9195 9195 374 1 LSMSQLNEK DEYGPETRLSMSQLNE SMSQLNEKETPFELIE R L S E K E 0 0 1 0 0 1 1 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 9 0 1048.5223 Q08211 Q08211 622 630 DHX9 ATP-dependent RNA helicase A yes yes 2 0.022818 60.118 By MS/MS 1 0 0 0 3689 2012 4173 9384 9196 9196 794 3879 1 LSNEEMLVSNK L S N K 0 0 2 0 0 0 2 0 0 0 2 1 1 0 0 2 0 0 0 1 0 0 11 0 1262.6177 REV__P54257 yes yes 2 0.016501 67.879 By MS/MS By matching 2 1 35256000 25834000 9422300 + 3690 3208 4174 9385;9386;9387 9197 9197 6806 1 LSNGSFSAPSLTNSR PKTGLSARLSNGSFSA APSLTNSRGSVHTVSF R L S S R G 1 1 2 0 0 0 0 1 0 0 2 0 0 1 1 5 1 0 0 0 0 0 15 0 1536.7532 O94806 O94806 40 54 PRKD3 Serine/threonine-protein kinase D3 yes yes 2 0.0079982 74.338 By MS/MS By matching 1 1 14692000 7272800 7419200 3691 1569 4175 9388;9389 9198 9198 2972 1 LSNIFVIGK NGNSFATRLSNIFVIG SNIFVIGKGNKPWISL R L S G K G 0 0 1 0 0 0 0 1 0 2 1 1 0 1 0 1 0 0 0 1 0 0 9 0 989.59097 P62701 P62701 222 230 RPS4X 40S ribosomal protein S4, X isoform yes yes 2 0.0048287 111.74 By MS/MS By MS/MS 1 1 9135300 5331600 3803600 3692 1943 4176 9390;9391 9199;9200 9199 2 LSNVSLTGVSTIR CSGVRRRRLSNVSLTG LTGVSTIRTSSAELST R L S I R T 0 1 1 0 0 0 0 1 0 1 2 0 0 0 0 3 2 0 0 2 0 0 13 0 1345.7565 Q15139;F8WBA3 Q15139 204 216 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 2 0.00149 90.853 By MS/MS 1 6482700 6482700 0 3693 2129 4177 9392 9201 9201 4207;4208 1 LSPSPTTEDPR PTQSEEEKLSPSPTTE SPTTEDPRVRSHVSRQ K L S P R V 0 1 0 1 0 0 1 0 0 0 1 0 0 0 3 2 2 0 0 0 0 0 11 0 1198.583 E7EQY4;D6W5A2;E7EV10;Q9BTC8 E7EQY4 426 436 MTA3 Metastasis-associated protein MTA3 yes no 2 0.031672 45.879 By matching By MS/MS 1 1 19089000 8077300 11011000 3694 771 4178 9393;9394 9202 9202 1380 1 LSPTPSMQDGLDLPSETDLR HSLIPEERLSPTPSMQ LPSETDLRILGCELIQ R L S L R I 0 1 0 3 0 1 1 1 0 0 4 0 1 0 3 3 2 0 0 0 0 0 20 0 2171.0416 Q9UK58 Q9UK58 64 83 CCNL1 Cyclin-L1 yes yes 2 0.0029243 63.302 By matching By MS/MS 1 1 9890100 5664300 4225800 3695 3017 4179 9395;9396 9203 9203 1200 6353 1 LSQMQSPIPLTETR FGAQTSSRLSQMQSPI PIPLTETRTPPGPCCS R L S T R T 0 1 0 0 0 2 1 0 0 1 2 0 1 0 2 2 2 0 0 0 0 0 14 0 1599.829 H3BSW6;Q2VPK5 H3BSW6 485 498 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 yes no 2 0.00044442 106.19 By MS/MS By MS/MS 2 2 38289000 17003000 21285000 3696 1252 4180;4181 9397;9398;9399;9400 9204;9205;9206;9207 9205 451 2332 4 LSQNNFALGYK SFDTAKSKLSQNNFAL NNFALGYKAADFQLHT K L S Y K A 1 0 2 0 0 1 0 1 0 0 2 1 0 1 0 1 0 0 1 0 0 0 11 0 1253.6404 Q9Y277 Q9Y277 164 174 VDAC3 Voltage-dependent anion-selective channel protein 3 yes yes 2 0.0069284 85.862 By matching By MS/MS 1 1 4650600 2028800 2621900 3697 3085 4182 9401;9402 9208 9208 1 LSQSMESNSGK RGKKRVKRLSQSMESN SMESNSGKVTDENSES R L S G K V 0 0 1 0 0 1 1 1 0 0 1 1 1 0 0 4 0 0 0 0 0 0 11 0 1166.5238 F8WAT8;Q9ULE3 F8WAT8 503 513 DENND2A DENN domain-containing protein 2A yes no 2 0.028592 40.725 By MS/MS 1 0 0 0 3698 1046 4183 9403 9209 9209 377 1 LSQSSQDSSPVR RVTRSSARLSQSSQDS SQDSSPVRNLQSFGTE R L S V R N 0 1 0 1 0 2 0 0 0 0 1 0 0 0 1 5 0 0 0 1 0 0 12 0 1289.6212 O95251 O95251 49 60 KAT7 Histone acetyltransferase KAT7 yes yes 2 0.00024874 116.9 By MS/MS By MS/MS 1 1 31220000 17031000 14188000 3699 1587 4184 9404;9405 9210;9211 9211 3006 2 LSQVSDSVSGQTVVDPK RNTLMDMRLSQVSDSV GQTVVDPKGYLTDLNS R L S P K G 0 0 0 2 0 2 0 1 0 0 1 1 0 0 1 4 1 0 0 4 0 0 17 0 1744.8843 O94906 O94906 255 271 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.0047992 85.203 By MS/MS By MS/MS 1 1 25275000 13543000 11733000 3700 1574 4185 9406;9407 9212;9213 9212 2984;7352 2 LSSEDEEEDEAEDDQSEASGK HPSNMMSKLSSEDEEE DQSEASGKKSVKG___ K L S G K K 2 0 0 4 0 1 7 1 0 0 1 1 0 0 0 4 0 0 0 0 0 0 21 0 2297.8779 G3V4G1;Q8NEJ9 G3V4G1 116 136 NGDN Neuroguidin yes no 2 0.021516 82.837 By MS/MS 1 0 0 0 3701 1081 4186 9408 9214 9214 2036;2037 1 LSSEDEEEDEAEDDQSEASGKK HPSNMMSKLSSEDEEE QSEASGKKSVKG____ K L S K K S 2 0 0 4 0 1 7 1 0 0 1 2 0 0 0 4 0 0 0 0 0 0 22 1 2425.9729 G3V4G1;Q8NEJ9 G3V4G1 116 137 NGDN Neuroguidin yes no 3 5.1415E-12 138.46 By MS/MS By matching 1 1 43648000 24083000 19565000 3702 1081 4187 9409;9410 9215 9215 2036;2037 1 LSSESHHGGSPIHWVLPAGMSAK GKFQGFARLSSESHHG LPAGMSAKMLGGVFKI R L S A K M 2 0 0 0 0 0 1 3 3 1 2 1 1 0 2 5 0 1 0 1 0 0 23 0 2384.1695 J3QR07;Q96MU7 J3QR07 415 437 YTHDC1 YTH domain-containing protein 1 yes no 3;4 2.0066E-05 90.882 By MS/MS By MS/MS 3 3 80819000 37707000 43112000 3703 1353 4188;4189 9411;9412;9413;9414;9415;9416 9216;9217;9218;9219;9220;9221;9222;9223 9218 474 2499;2500;2501 8 LSSFSCGQASATPFTDIK RGKPVRLRLSSFSCGQ ATPFTDIKSNNWSLED R L S I K S 2 0 0 1 1 1 0 1 0 1 1 1 0 2 1 4 2 0 0 0 0 0 18 0 1915.8986 Q14680 Q14680 334 351 MELK Maternal embryonic leucine zipper kinase yes yes 2 8.3781E-05 123.54 By MS/MS By MS/MS 1 1 52196000 28915000 23281000 3704 2101 4190 9417;9418 9224;9225;9226 9226 4153;4154 3 LSSGLVSPAPSFYSK AMSEYEDRLSSGLVSP PAPSFYSKEYDNEGTV R L S S K E 1 0 0 0 0 0 0 1 0 0 2 1 0 1 2 5 0 0 1 1 0 0 15 0 1538.7981 Q15911 Q15911 2890 2904 ZFHX3 Zinc finger homeobox protein 3 yes yes 2 0.007475 74.966 By MS/MS 1 5049200 5049200 0 3705 2160 4191 9419 9227 9227 4285 1 LSSKLSAVSLR ATRESMVKLSSKLSAV KLSAVSLRGIGSPSTD K L S L R G 1 1 0 0 0 0 0 0 0 0 3 1 0 0 0 4 0 0 0 1 0 0 11 1 1159.6925 Q15036 Q15036 432 442 SNX17 Sorting nexin-17 yes yes 2;3 0.011325 74.133 By MS/MS By matching 2 1 60876000 36095000 24781000 3706 2121 4192 9420;9421;9422 9228;9229 9228 4192 2 LSSKSVNAQVTDINSK LVLTSVARLSSKSVNA QVTDINSKGLELRKTV R L S S K G 1 0 2 1 0 1 0 0 0 1 1 2 0 0 0 4 1 0 0 2 0 0 16 1 1689.8897 H7C5Z8;A0A087WTM9;P25445 H7C5Z8 18 33 FAS Tumor necrosis factor receptor superfamily member 6 yes no 3 0.025338 54.598 By MS/MS By MS/MS 1 1 0 0 0 3707 38 4193 9423;9424 9230;9231 9231 70;71;72 2 LSSLSSQTEPTSAGDQYDCSR RKQPPSSRLSSLSSQT GDQYDCSRDQRSTSVD R L S S R D 1 1 0 2 1 2 1 1 0 0 2 0 0 0 1 6 2 0 1 0 0 0 21 0 2287.9863 Q9BY89;A0A1B0GVJ7 Q9BY89 1572 1592 KIAA1671 Uncharacterized protein KIAA1671 yes no 2 0.0088211 61.684 By MS/MS By matching 1 1 14776000 9452200 5323800 3708 2777 4194 9425;9426 9232 9232 5779;5780 1 LSSPAAFLPACNSPSK GTACTLDKLSSPAAFL PACNSPSKEMKEIPFN K L S S K E 3 0 1 0 1 0 0 0 0 0 2 1 0 1 3 4 0 0 0 0 0 0 16 0 1645.8134 Q86YS7;H0YFE9 Q86YS7 248 263 C2CD5 C2 domain-containing protein 5 yes no 2 0.014358 67.118 By matching By MS/MS 1 1 10201000 4191400 6009300 3709 2422 4195 9427;9428 9233 9233 4948;4949 1 LSSPAAFLPACNSPSKEMK GTACTLDKLSSPAAFL NSPSKEMKEIPFNEDP K L S M K E 3 0 1 0 1 0 1 0 0 0 2 2 1 1 3 4 0 0 0 0 0 0 19 1 2033.9914 Q86YS7;H0YFE9 Q86YS7 248 266 C2CD5 C2 domain-containing protein 5 yes no 3 0.0077661 60.307 By MS/MS By MS/MS 1 1 24843000 11893000 12950000 3710 2422 4196 9429;9430 9234;9235 9234 980 4948;4949 2 LSSPISK GKRGHHNRLSSPISKR RLSSPISKRCRTSILS R L S S K R 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 3 0 0 0 0 0 0 7 0 730.4225 Q99728 Q99728 328 334 BARD1 BRCA1-associated RING domain protein 1 yes yes 2 0.026082 88.177 By MS/MS 1 3126900 0 3126900 3711 2733 4197 9431 9236 9236 5672 1 LSSPVLHR RLSNGLARLSSPVLHR LSSPVLHRLRLREDEN R L S H R L 0 1 0 0 0 0 0 0 1 0 2 0 0 0 1 2 0 0 0 1 0 0 8 0 907.52395 Q16643;D6RCR4;D6R9W4 Q16643 140 147 DBN1 Drebrin yes no 2 0.02779 65.157 By MS/MS By matching 1 1 1432400000 826560000 605790000 3712 2166 4198 9432;9433 9237 9237 4310 1 LSSQISAGEEK GWNEKSVKLSSQISAG QISAGEEKWNSVSPAS K L S E K W 1 0 0 0 0 1 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 11 0 1147.5721 Q86UE4;E5RJU9;H0YB56 Q86UE4 293 303 MTDH Protein LYRIC no no 2 0.00069456 110.15 By MS/MS By MS/MS 1 1 258010000 140820000 117200000 3713 2401;1161 4199 9434;9435 9238;9239;9240;9241 9241 2204 4 LSSQISAGEEKWNSVSPASAGK GWNEKSVKLSSQISAG VSPASAGKRKTEPSAW K L S G K R 3 0 1 0 0 1 2 2 0 1 1 2 0 0 1 6 0 1 0 1 0 0 22 1 2232.1022 Q86UE4;E5RJU9;H0YB56 Q86UE4 293 314 MTDH Protein LYRIC no no 2;3 0.00015549 99.873 By MS/MS By MS/MS 2 2 152120000 85471000 66646000 3714 2401;1161 4200 9436;9437;9438;9439 9242;9243;9244;9245 9243 2204 4 LSSQISAGEEKWNSVSPASAGKR GWNEKSVKLSSQISAG SPASAGKRKTEPSAWS K L S K R K 3 1 1 0 0 1 2 2 0 1 1 2 0 0 1 6 0 1 0 1 0 0 23 2 2388.2034 Q86UE4;E5RJU9;H0YB56 Q86UE4 293 315 MTDH Protein LYRIC no no 3 0.0055455 64.761 By MS/MS By MS/MS 1 1 37936000 18620000 19316000 3715 2401;1161 4201 9440;9441 9246;9247 9247 2204 2 LSSSMYSSQGSSGSSQSKNSSQSGGK SEGSSSSKLSSSMYSS NSSQSGGKPGSSPITK K L S G K P 0 0 1 0 0 3 0 4 0 0 1 2 1 0 0 13 0 0 1 0 0 0 26 1 2539.1093 Q15648 Q15648 1127 1152 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2;3 0.026708 50.531 By MS/MS 2 0 0 0 3716 2148 4202 9442;9443 9248;9249 9249 864 4261;4262;4263;4264 2 LSSSSATLLNSPDR VDPVISKRLSSSSATL TLLNSPDRARRLQLSP R L S D R A 1 1 1 1 0 0 0 0 0 0 3 0 0 0 1 5 1 0 0 0 0 0 14 0 1446.7314 A0A087WZ40;Q14244 A0A087WZ40 221 234 MAP7 Ensconsin yes no 2 0.016177 83.226 By MS/MS 1 7604600 0 7604600 3717 136 4203 9444 9250 9250 224 0 LSSTDDGYIDLQFK SSKVKYSRLSSTDDGY GYIDLQFKKTPPKIPY R L S F K K 0 0 0 3 0 1 0 1 0 1 2 1 0 1 0 2 1 0 1 0 0 0 14 0 1600.7621 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 22 35 TMEM230 Transmembrane protein 230 yes no 2 0.00062022 97.797 By MS/MS By MS/MS 2 2 31809000 17266000 14543000 3718 42 4204 9445;9446;9447;9448 9251;9252;9253;9254;9255 9252 80;6841 5 LSSTDDGYIDLQFKK SSKVKYSRLSSTDDGY YIDLQFKKTPPKIPYK R L S K K T 0 0 0 3 0 1 0 1 0 1 2 2 0 1 0 2 1 0 1 0 0 0 15 1 1728.857 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 22 36 TMEM230 Transmembrane protein 230 yes no 2 0.00066502 99.539 By MS/MS By matching 1 1 13818000 7491300 6326300 3719 42 4205 9449;9450 9256 9256 80;6841 1 LSSYTECYK LIPIAKKRLSSYTECY SSYTECYKWSSSPENA R L S Y K W 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 2 1 0 2 0 0 0 9 0 1149.5012 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 447 455 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.012404 74.944 By MS/MS By matching 1 1 50339000 26169000 24170000 3720 226 4206 9451;9452 9257 9257 401 1 LSTEADTDTPK NTPDPSTKLSTEADTD EADTDTPKKLMFRRLK K L S P K K 1 0 0 2 0 0 1 0 0 0 1 1 0 0 1 1 3 0 0 0 0 0 11 0 1176.551 H7C3H4;Q9BYW2 H7C3H4 1498 1508 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.0051799 92.295 By MS/MS By matching 1 1 11944000 6442300 5501700 3721 1284 4207 9453;9454 9258;9259 9259 7234 2 LSTHSPFRTLNINGQIPTGEGVK RPSEWDKRLSTHSPFR IPTGEGVKKTSVLPSE R L S V K K 0 1 2 0 0 1 1 3 1 2 2 1 0 1 2 2 3 0 0 1 0 0 23 1 2465.3027 A0A1B0GWG0 A0A1B0GWG0 377 399 yes yes 3 0.02847 47.088 By MS/MS 1 0 0 0 3722 434 4208 9455 9260 9260 812;6959 1 LSTSPVR VTNEWEKRLSTSPVRL RLSTSPVRLAARQEDA R L S V R L 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 7 0 758.42865 A8K968;A0A0A0MRA8;A0A0A0MSA4;A0A0J9YW26;A0A1B0GTF8;Q9Y2J2;A0A0J9YY18;A0A0J9YW31;A0A0J9YWN0;A0A0J9YWE1;A0A0J9YWS4 A8K968 469 475 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 2 0.027241 78.264 By matching By MS/MS 1 1 28591000 15885000 12706000 3723 205 4209 9456;9457 9261 9261 365 1 LSVGAVSSKPTTPTIATPQTVSVPNK NQGRLVPRLSVGAVSS QTVSVPNKVATPMSVT R L S N K V 2 0 1 0 0 1 0 1 0 1 1 2 0 0 4 4 5 0 0 4 0 0 26 1 2579.417 Q9HBM6 Q9HBM6 146 171 TAF9B Transcription initiation factor TFIID subunit 9B yes yes 3 0.00021059 75.43 By MS/MS By MS/MS 2 2 63208000 35425000 27783000 3724 2869 4210 9458;9459;9460;9461 9262;9263;9264 9262 6039;7862;7863 3 LSVGEQPDVTHDPYEFLQSPEPAASAK HHLGSPSRLSVGEQPD PEPAASAKT_______ R L S A K T 3 0 0 2 0 2 3 1 1 0 2 1 0 1 4 3 1 0 1 2 0 0 27 0 2911.3876 Q9H8M2 Q9H8M2 570 596 BRD9 Bromodomain-containing protein 9 yes yes 3 8.5688E-05 74.665 By matching By MS/MS 1 1 77979000 43089000 34890000 3725 2855 4211 9462;9463 9265 9265 6019 1 LSVPTSDEEDEVPAPK ELMERLKKLSVPTSDE EDEVPAPKPRGGKKTK K L S P K P 1 0 0 2 0 0 3 0 0 0 1 1 0 0 3 2 1 0 0 2 0 0 16 0 1711.8152 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 105 120 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2 0.026203 74.783 By matching By MS/MS 1 1 53573000 27625000 25947000 3726 2232 4212 9464;9465 9266 9266 4466;4467;7639 1 LSVPTSDEEDEVPAPKPR ELMERLKKLSVPTSDE EVPAPKPRGGKKTKGG K L S P R G 1 1 0 2 0 0 3 0 0 0 1 1 0 0 4 2 1 0 0 2 0 0 18 1 1964.9691 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 105 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 6.2229E-107 222.51 By MS/MS By MS/MS 4 4 574370000 286090000 288280000 3727 2232 4213;4214 9466;9467;9468;9469;9470;9471;9472;9473 9267;9268;9269;9270;9271;9272;9273;9274;9275;9276;9277;9278 9271 4466;4467;7639 12 LSVPYVPQVTDEDRLSR GSGYSVERLSVPYVPQ TDEDRLSRRKSIVDTV R L S S R R 0 2 0 2 0 1 1 0 0 0 2 0 0 0 2 2 1 0 1 3 0 0 17 1 1973.0218 A0A1B0GUZ7;Q14156 A0A1B0GUZ7 706 722 EFR3A Protein EFR3 homolog A yes no 3 0.00073893 82.635 By MS/MS By MS/MS 1 1 25892000 13265000 12627000 3728 424 4215 9474;9475 9279;9280 9280 794;6954 2 LSVQSNPSPQLR QLSVQQNKLSVQSNPS SNPSPQLRSVMKVESS K L S L R S 0 1 1 0 0 2 0 0 0 0 2 0 0 0 2 3 0 0 0 1 0 0 12 0 1324.7099 O75152;E9PBY7;E9PQ61 O75152 125 136 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 5.6732E-19 164.92 By MS/MS By MS/MS 1 1 53816000 17474000 36343000 3729 1538 4216 9476;9477 9281;9282 9282 2906 2 LSVSSNDTQESGNSSGPSPGAK TPSLPDDRLSVSSNDT SGPSPGAKFSHILQKD R L S A K F 1 0 2 1 0 1 1 3 0 0 1 1 0 0 2 7 1 0 0 1 0 0 22 0 2104.9509 Q9Y6D6 Q9Y6D6 393 414 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 2 0.0065955 63.606 By MS/MS By matching 1 1 7409600 3397300 4012300 3730 3148 4217 9478;9479 9283 9283 6737 1 LSYLPATVEPASPTPAHSLPR TLHTYRGRLSYLPATV TPAHSLPRAKSELTLT R L S P R A 3 1 0 0 0 0 1 0 1 0 3 0 0 0 5 3 2 0 1 1 0 0 21 0 2203.1637 E9PCV4;M0R344;Q9NRA0 E9PCV4 170 190 SPHK2 Sphingosine kinase 2 yes no 3 0.019775 57.432 By matching By MS/MS 1 1 17728000 8228100 9500300 3731 850 4218 9480;9481 9284 9284 1580 0 LTDCVVMR NYYEQWGKLTDCVVMR LTDCVVMRDPASKRSR K L T M R D 0 1 0 1 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 2 0 0 8 0 992.47832 P22626;A0A087WUI2 P22626 47 54 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.02241 90.777 By matching By MS/MS 1 1 8333700 3654200 4679600 3732 1749 4219 9482;9483 9285 9285 1 LTDEDFSPFGSGGGLFSGGK DNLFAPPKLTDEDFSP GGLFSGGKGLFDDEDE K L T G K G 0 0 0 2 0 0 1 6 0 0 2 1 0 3 1 3 1 0 0 0 0 0 20 0 1973.9007 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6;A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1 F8W7U3 258 277 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 2 1.4454E-102 213.64 By MS/MS By MS/MS 1 1 75705000 51084000 24622000 3733 814;183 4220 9484;9485 9286;9287 9286 316 2 LTDNQTSTMIK AGQRCIKKLTDNQTST NQTSTMIKATARSAPD K L T I K A 0 0 1 1 0 1 0 0 0 1 1 1 1 0 0 1 3 0 0 0 0 0 11 0 1250.6177 Q5TA58;Q9UL18;Q9H9G7;Q9HCK5 Q5TA58 279 289 AGO1;AGO3;AGO4 Protein argonaute;Protein argonaute-1;Protein argonaute-3;Protein argonaute-4 yes no 2 0.029909 46.88 By matching By MS/MS 1 1 7490100 4396700 3093400 3734 2250 4221 9486;9487 9288 9288 899 0 LTEGCSFR QPTGGKARLTEGCSFR LTEGCSFRRKQH____ R L T F R R 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 8 0 968.43857 P42677;C9J1C5;H0YMV8;Q71UM5 P42677 73 80 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 2 0.010088 92.538 By MS/MS By MS/MS 1 1 12327000 6222300 6104800 3735 1826 4222 9488;9489 9289;9290 9290 3443 2 LTFDSSFSPNTGK DQLARGLKLTFDSSFS SFSPNTGKKNAKIKTG K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 3 2 0 0 0 0 0 13 0 1399.662 P21796;C9JI87 P21796 97 109 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 1.0591E-14 158.89 By MS/MS By MS/MS 1 1 30309000 18720000 11589000 3736 1744 4223 9490;9491 9291;9292;9293 9291 3283 3 LTFDSSFSPNTGKK DQLARGLKLTFDSSFS FSPNTGKKNAKIKTGY K L T K K N 0 0 1 1 0 0 0 1 0 0 1 2 0 2 1 3 2 0 0 0 0 0 14 1 1527.7569 P21796;C9JI87 P21796 97 110 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 0.0020671 107.13 By MS/MS By MS/MS 1 1 121660000 66424000 55233000 3737 1744 4224 9492;9493 9294;9295 9295 3283 2 LTFDTTFSPNTGK DQICQGLKLTFDTTFS TFSPNTGKKSGKIKSS K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 1 4 0 0 0 0 0 13 0 1427.6933 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880 Q5JSD2 108 120 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2 1.556E-14 156.96 By MS/MS By MS/MS 1 1 28290000 15985000 12305000 3738 195 4225 9494;9495 9296;9297 9297 348;6879 2 LTFDTTFSPNTGKK DQICQGLKLTFDTTFS FSPNTGKKSGKIKSSY K L T K K S 0 0 1 1 0 0 0 1 0 0 1 2 0 2 1 1 4 0 0 0 0 0 14 1 1555.7882 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880 Q5JSD2 108 121 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2;3 0.0011282 103.14 By MS/MS By MS/MS 2 2 82023000 45645000 36378000 3739 195 4226 9496;9497;9498;9499 9298;9299;9300;9301;9302;9303 9303 348;6879 6 LTFSCLGGSDNFK NVNFEKSKLTFSCLGG LGGSDNFKHLNEIDLF K L T F K H 0 0 1 1 1 0 0 2 0 0 2 1 0 2 0 2 1 0 0 0 0 0 13 0 1444.6657 A0A087WYT3;Q15185 A0A087WYT3 40 52 PTGES3 Prostaglandin E synthase 3 yes no 2 0.010496 81.017 By MS/MS By matching 1 1 13198000 6383400 6814700 3740 128 4227 9500;9501 9304 9304 1 LTGMAFR VIPELNGKLTGMAFRV KLTGMAFRVPTANVSV K L T F R V 1 1 0 0 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 0 0 0 7 0 794.41089 P04406;E7EUT5;O14556 P04406 228 234 GAPDH;GAPDHS Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific yes no 2 0.02914 143.18 By matching By MS/MS 1 1 8098600 4094900 4003600 3741 1635 4228 9502;9503 9305 9305 1 LTGSTSSLNK SLHGSSGKLTGSTSSL GSTSSLNKLSVQSSGN K L T N K L 0 0 1 0 0 0 0 1 0 0 2 1 0 0 0 3 2 0 0 0 0 0 10 0 1006.5295 Q9NV70 Q9NV70 467 476 EXOC1 Exocyst complex component 1 yes yes 2 0.0029372 88.134 By MS/MS By MS/MS 1 1 20469000 11249000 9220100 3742 2923 4229 9504;9505 9306;9307 9306 6174 2 LTIQEHLYPAPSSPEKEQLLDR GPASTGSKLTIQEHLY EKEQLLDRRPTECMMS K L T D R R 1 1 0 1 0 2 3 0 1 1 4 1 0 0 3 2 1 0 1 0 0 0 22 1 2563.3282 Q5VUB5 Q5VUB5 513 534 FAM171A1 Protein FAM171A1 yes yes 3 0.020738 46.982 By MS/MS 1 6820700 6820700 0 3743 2269 4230 9506 9308 9308 4559;4560 1 LTLDTIFVPNTGK NKLAEGLKLTLDTIFV IFVPNTGKKSGKLKAS K L T G K K 0 0 1 1 0 0 0 1 0 1 2 1 0 1 1 0 3 0 0 1 0 0 13 0 1417.7817 Q9Y277;E5RK27;E5RFP6;E5RJN6;E5RHZ6 Q9Y277 97 109 VDAC3 Voltage-dependent anion-selective channel protein 3 yes no 2 0.0018639 99.283 By MS/MS By MS/MS 1 1 3824600 1973600 1851000 3744 3085 4231 9507;9508 9309;9310;9311 9309 3 LTLEGLEEDDDDRVSPTVLHK KKSRFRVKLTLEGLEE VSPTVLHKMSNSLEIS K L T H K M 0 1 0 4 0 0 3 1 1 0 4 1 0 0 1 1 2 0 0 2 0 0 21 1 2380.1758 Q9NPB8 Q9NPB8 161 181 GPCPD1 Glycerophosphocholine phosphodiesterase GPCPD1 yes yes 3 3.3413E-05 98.572 By MS/MS By MS/MS 1 1 26096000 13510000 12586000 3745 2884 4232 9509;9510 9312;9313 9313 6075;7867 2 LTLNSPIFDKPLSR LPEGYLEKLTLNSPIF IFDKPLSRRLRRVSLS K L T S R R 0 1 1 1 0 0 0 0 0 1 3 1 0 1 2 2 1 0 0 0 0 0 14 1 1599.8984 E5RJM2;E5RGN0;A0A087WZU2;Q00536;E5RIY8;E5RIU4;H0YBX5 E5RJM2 134 147 CDK16 Cyclin-dependent kinase 16 yes no 3 0.0074899 63.46 By MS/MS By matching 1 1 11595000 7042900 4551900 3746 146 4233 9511;9512 9314 9314 237 1 LTLSALLDGK QTLKPGIKLTLSALLD LSALLDGKNVNAGGHK K L T G K N 1 0 0 1 0 0 0 1 0 0 4 1 0 0 0 1 1 0 0 0 0 0 10 0 1029.607 P21796 P21796 257 266 VDAC1 Voltage-dependent anion-selective channel protein 1 yes yes 2 0.00032495 126.24 By MS/MS By MS/MS 1 1 1999800 0 1999800 3747 1744 4234 9513;9514 9315;9316 9315 2 LTPEEEEILNK LGRKKGAKLTPEEEEI EEEEILNKKRSKKIQK K L T N K K 0 0 1 0 0 0 4 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 11 0 1313.6715 Q5JR95;P62241 Q5JR95 109 119 RPS8 40S ribosomal protein S8 yes no 2 1.8934E-05 126.24 By MS/MS By MS/MS 1 1 27453000 12675000 14778000 3748 1935 4235 9515;9516 9317;9318 9318 2 LTPLPEDNSMNVDQDGDPSDR FLSKIEEKLTPLPEDN QDGDPSDRMEVQEQEE K L T D R M 0 1 2 5 0 1 1 1 0 0 2 0 1 0 3 2 1 0 0 1 0 0 21 0 2314.0019 P78527 P78527 3197 3217 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.023953 45.863 By matching By MS/MS 1 1 16705000 7632200 9073200 3749 1964 4236 9517;9518 9319 9319 772 3752 1 LTPSPDIIVLSDNEASSPR RSEPERGRLTPSPDII DNEASSPRSSSRMEER R L T P R S 1 1 1 2 0 0 1 0 0 2 2 0 0 0 3 4 1 0 0 1 0 0 19 0 2010.0269 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 119 137 GATAD2B Transcriptional repressor p66-beta yes no 2;3 0.00025152 103.94 By MS/MS By MS/MS 4 5 183880000 101590000 82296000 3750 398 4237;4238 9519;9520;9521;9522;9523;9524;9525;9526;9527 9320;9321;9322;9323;9324;9325;9326;9327 9321 727;728;729;730;6944 7 LTPVRPAAASPIVSGAR HTMKPAPRLTPVRPAA SPIVSGARRRRVRCRK R L T A R R 4 2 0 0 0 0 0 1 0 1 1 0 0 0 3 2 1 0 0 2 0 0 17 1 1661.9577 I3VM54;Q9Y2K7 I3VM54 532 548 KDM2A Lysine-specific demethylase 2A yes no 3 0.018697 51.695 By MS/MS By matching 1 1 10887000 7634800 3252100 3751 1315 4239 9528;9529 9328 9328 2440 1 LTPVSLSNSPIK VTKELYVKLTPVSLSN SLSNSPIKGADCQEVP K L T I K G 0 0 1 0 0 0 0 0 0 1 2 1 0 0 2 3 1 0 0 1 0 0 12 0 1254.7184 P46100 P46100 590 601 ATRX Transcriptional regulator ATRX yes yes 2 0.0016742 89.747 By MS/MS By MS/MS 1 1 63407000 30641000 32766000 3752 1837 4240 9530;9531 9329;9330 9330 3477;3478 2 LTPVSPESSSTEEK EHGGKRSRLTPVSPES ESSSTEEKSSSQPSSC R L T E K S 0 0 0 0 0 0 3 0 0 0 1 1 0 0 2 4 2 0 0 1 0 0 14 0 1489.7148 E7EMC7;Q13501 E7EMC7 268 281 SQSTM1 Sequestosome-1 yes no 2 0.0049506 79.804 By MS/MS By matching 1 1 150230000 79596000 70636000 3753 790 4241 9532;9533 9331;9332 9332 1407 2 LTQAEISEQPTMATVVPQVPTSPK PKRNDSTRLTQAEISE PQVPTSPKSSLSVQPG R L T P K S 2 0 0 0 0 3 2 0 0 1 1 1 1 0 4 2 4 0 0 3 0 0 24 0 2551.3204 C9K0J5;Q70E73 C9K0J5 1185 1208 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 3 0.0007046 66.31 By MS/MS By MS/MS 1 1 56916000 22647000 34269000 3754 707 4242 9534;9535 9333;9334;9335;9336 9336 274 1312;7045 4 LTQTSSTEQLNVLETETEVLNK KPVDETTKLTQTSSTE TETEVLNKEAVEVKGG K L T N K E 0 0 2 0 0 2 4 0 0 0 4 1 0 0 0 2 5 0 0 2 0 0 22 0 2476.2544 Q5JSH3;H7BY83 Q5JSH3 157 178 WDR44 WD repeat-containing protein 44 yes no 2 1.1807E-89 205.33 By MS/MS By MS/MS 1 1 145520000 77110000 68414000 3755 2219 4243 9536;9537 9337;9338 9338 4435;7634 2 LTQVSPR FLKECGLKLTQVSPRG KLTQVSPRGINAIFER K L T P R G 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 7 0 799.4552 Q9HCG8;B7WP74 Q9HCG8 304 310 CWC22 Pre-mRNA-splicing factor CWC22 homolog yes no 2 0.02641 82.452 By MS/MS By matching 1 1 8017500 5503100 2514400 3756 2875 4244 9538;9539 9339 9339 6054 1 LTQYHGGSLPNVSQLR FQKLQQLRLTQYHGGS LPNVSQLRSSASEFQP R L T L R S 0 1 1 0 0 2 0 2 1 0 3 0 0 0 1 2 1 0 1 1 0 0 16 0 1768.922 Q6UUV7;H0YK33 Q6UUV7 55 70 CRTC3 CREB-regulated transcription coactivator 3 yes no 2;3 0.00058798 83.723 By MS/MS By MS/MS 2 2 37435000 18181000 19254000 3757 2339 4245 9540;9541;9542;9543 9340;9341;9342 9340 4726 3 LTSCTPGLEDEKEASENETDMEDPR RVSRFHRRLTSCTPGL ETDMEDPREIQTDSWR R L T P R E 1 1 1 3 1 0 6 1 0 0 2 1 1 0 2 2 3 0 0 0 0 0 25 1 2852.1964 Q8WXH0;A0A0C4DGK3;A0A0C4DH87 Q8WXH0 6347 6371 SYNE2 Nesprin-2 yes no 3 0.002639 60.635 By MS/MS 1 37556000 37556000 0 3758 2570 4246 9544 9343 9343 1030 5267;7753 1 LTSGKLSGINEIPRPFSPPVTSNTSPPPAAPLAR PRPASRPKLTSGKLSG PPAAPLARAESSSSIS K L T A R A 3 2 2 0 0 0 1 2 0 2 3 1 0 1 8 5 3 0 0 1 0 0 34 2 3468.8729 Q0JRZ9 Q0JRZ9 472 505 FCHO2 F-BAR domain only protein 2 yes yes 4 0.0049447 47.319 By MS/MS 1 7308800 0 7308800 3759 2021 4247 9545 9344 9344 3920;3921 1 LTSIGSDEDEETETYQEK KDRNSMLRLTSIGSDE ETETYQEKVHMTWTKD R L T E K V 0 0 0 2 0 1 5 1 0 1 1 1 0 0 0 2 3 0 1 0 0 0 18 0 2072.891 B3KXX3;Q9UHW9 B3KXX3 839 856 SLC12A6 Solute carrier family 12 member 6 yes no 2 0.00036204 114.56 By MS/MS By MS/MS 1 2 39321000 12584000 26738000 3760 543 4248;4249 9546;9547;9548 9345;9346 9345 1018;1019 2 LTSPVTSISPIQASEK TGGSSVPKLTSPVTSI SPIQASEKTAVSDILK K L T E K T 1 0 0 0 0 1 1 0 0 2 1 1 0 0 2 4 2 0 0 1 0 0 16 0 1656.8934 E9PMC9;Q7Z589 E9PMC9 1030 1045 C11orf30;EMSY Protein EMSY yes no 2 0.0043082 88.311 By MS/MS By MS/MS 1 1 15659000 8377500 7281300 3761 912 4250 9549;9550 9347;9348 9347 7122 2 LTSQSEAMALQSIR ESSKNKSRLTSQSEAM AMALQSIRNMRGNSHC R L T I R N 2 1 0 0 0 2 1 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 14 0 1533.7821 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C0A7 A0A087X1U1 496 509 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.00023048 96.673 By MS/MS By MS/MS 2 2 27960000 13670000 14290000 3762 170 4251;4252 9551;9552;9553;9554 9349;9350;9351;9352 9351 73 276 4 LTSTSTSDTQNINNSAQR ASGVRRGRLTSTSTSD NINNSAQRRTALLNYE R L T Q R R 1 1 3 1 0 2 0 0 0 1 1 0 0 0 0 4 4 0 0 0 0 0 18 0 1936.9086 Q8WU20 Q8WU20 325 342 FRS2 Fibroblast growth factor receptor substrate 2 yes yes 2 0.0054824 70.563 By MS/MS By MS/MS 1 1 12719000 7530500 5188400 3763 2550 4253 9555;9556 9353;9354 9354 5209;5210 2 LTTTGQVTSPVK KKAVVQAKLTTTGQVT GQVTSPVKGASFVTST K L T V K G 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 1 4 0 0 2 0 0 12 0 1230.682 P49916;K7ENR9;K7ERZ5 P49916 202 213 LIG3 DNA ligase 3 yes no 2 1.4404E-06 129.76 By MS/MS By MS/MS 1 1 458400000 245550000 212850000 3764 1865 4254 9557;9558 9355;9356 9356 3623 2 LTTTGQVTSPVKGASFVTSTNPR KKAVVQAKLTTTGQVT FVTSTNPRKFSGFSAK K L T P R K 1 1 1 0 0 1 0 2 0 0 1 1 0 1 2 3 6 0 0 3 0 0 23 1 2348.2336 P49916;K7ENR9;K7ERZ5 P49916 202 224 LIG3 DNA ligase 3 yes no 2;3 4.7203E-06 122.8 By MS/MS By MS/MS 2 2 316600000 158520000 158090000 3765 1865 4255 9559;9560;9561;9562 9357;9358;9359;9360 9357 3623 4 LTVASPK PLSSPNGKLTVASPKR KLTVASPKRGQKREEG K L T P K R 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 7 0 714.42759 H0YM23;O75179 H0YM23 1589 1595 ANKRD17 Ankyrin repeat domain-containing protein 17 yes no 2 0.0309 72.325 By matching By MS/MS 1 1 19779000 10862000 8917000 3766 1215 4256 9563;9564 9361 9361 1 LTVENSPK NFPNEFAKLTVENSPK LTVENSPKQEAGISEG K L T P K Q 0 0 1 0 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 8 0 886.476 F8VVL1;O43583 F8VVL1 68 75 DENR Density-regulated protein yes no 2 0.0068243 125.68 By MS/MS By MS/MS 1 1 46650000 24600000 22050000 3767 1015 4257 9565;9566 9362;9363;9364;9365 9363 1901 4 LTVENSPKQEAGISEGQGTAGEEEEK NFPNEFAKLTVENSPK TAGEEEEKKKQKRGGR K L T E K K 2 0 1 0 0 2 7 4 0 1 1 2 0 0 1 2 2 0 0 1 0 0 26 1 2716.2675 F8VVL1;O43583 F8VVL1 68 93 DENR Density-regulated protein yes no 3 6.8768E-07 90.166 By MS/MS By MS/MS 1 1 194080000 93520000 100560000 3768 1015 4258 9567;9568 9366;9367 9366 1901 2 LTVSDGESGEEKK RHRLLRHKLTVSDGES GESGEEKKTKPKEHKE K L T K K T 0 0 0 1 0 0 3 2 0 0 1 2 0 0 0 2 1 0 0 1 0 0 13 1 1377.6624 P46100;A0A096LNL9 P46100 1345 1357 ATRX Transcriptional regulator ATRX yes no 2 0.012971 72.209 By matching By MS/MS 1 1 12292000 6439000 5853400 3769 1837 4259 9569;9570 9368 9368 3479;3480 0 LTWHSCPEDEAQ VIAFYEERLTWHSCPE SCPEDEAQ________ R L T A Q - 1 0 0 1 1 1 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 0 12 0 1471.6038 Q13185 Q13185 172 183 CBX3 Chromobox protein homolog 3 yes yes 2 0.0013857 92.781 By MS/MS By MS/MS 1 1 118130000 57763000 60369000 3770 2048 4260 9571;9572 9369;9370 9369 4021 2 LVAIVDVIDQNR SFGPHAGKLVAIVDVI VDVIDQNRALVDGPCT K L V N R A 1 1 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 3 0 0 12 0 1353.7616 P50914;E7EPB3 P50914 24 35 RPL14 60S ribosomal protein L14 yes no 2 0.0098903 87.258 By MS/MS By matching 1 1 13323000 7297000 6025700 3771 1870 4261 9573;9574 9371 9371 0 LVALLNTLDR RVSEAIEKLVALLNTL ALLNTLDRWIDETPPV K L V D R W 1 1 1 1 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 1 0 0 10 0 1126.671 A6PVN7;A6PVN8;C9IZ76;A6PVN6;Q5T949;Q5T948;A6PVN9;F6WIT2;A6PVN5;Q15257 A6PVN7 42 51 PPP2R4 Serine/threonine-protein phosphatase 2A activator yes no 2 0.0060106 89.355 By MS/MS 1 2650500 2650500 0 3772 487 4262 9575 9372 9372 1 LVANDSQLTPLEEWSNNR PGNGESDRLVANDSQL LEEWSNNRGPVEVADN R L V N R G 1 1 3 1 0 1 2 0 0 0 3 0 0 0 1 2 1 1 0 1 0 0 18 0 2085.0127 H0YCZ2;Q8NG31;E9PPJ1 H0YCZ2 53 70 CASC5 Protein CASC5 yes no 2 0.029273 64.89 By MS/MS By matching 1 1 7472700 3294900 4177800 3773 1171 4263 9576;9577 9373 9373 1 LVAPDLLETSSLETITQQLAHHKAMMEEIAGFEDR WLLQMSGRLVAPDLLE EIAGFEDRLNNLQMKG R L V D R L 4 1 0 2 0 2 5 1 2 2 5 1 2 1 1 2 3 0 0 1 0 0 35 1 3922.9445 Q8NF91 Q8NF91 3945 3979 SYNE1 Nesprin-1 yes yes 3 0.03003 43.798 By MS/MS 1 0 0 0 3774 2516 4264 9578 9374 9374 1 LVEPHSPSPSSK RSATPKVRLVEPHSPS HSPSPSSKFSTKGLCK R L V S K F 0 0 0 0 0 0 1 0 1 0 1 1 0 0 3 4 0 0 0 1 0 0 12 0 1263.6459 O15014 O15014 571 582 ZNF609 Zinc finger protein 609 yes yes 2 2.6549E-09 137.09 By MS/MS By MS/MS 2 1 60322000 50796000 9526500 3775 1466 4265;4266 9579;9580;9581 9375;9376;9377;9378 9375 2731;2732;2733 4 LVEQANSPK QEELASGKLVEQANSP VEQANSPKHQWGEEEP K L V P K H 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 9 0 984.52401 O95391 O95391 209 217 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 2 0.00048317 149.94 By MS/MS By MS/MS 1 2 60266000 30035000 30232000 3776 1593 4267 9582;9583;9584 9379;9380;9381;9382;9383 9383 3018 5 LVFLGLDNAGK GLYKKSGKLVFLGLDN LGLDNAGKTTLLHMLK K L V G K T 1 0 1 1 0 0 0 2 0 0 3 1 0 1 0 0 0 0 0 1 0 0 11 0 1145.6445 X1WI22;D6RAA2;Q5SQT8;D6RDB2;D6RD69;Q9Y6B6;Q9NR31 X1WI22 28 38 SAR1A;SAR1B GTP-binding protein SAR1b;GTP-binding protein SAR1a yes no 2 0.0045567 91.265 By MS/MS 1 2147400 2147400 0 3777 738 4268 9585 9384 9384 1 LVGATATSSPPPK ________________ ATSSPPPKARSNENLD R L V P K A 2 0 0 0 0 0 0 1 0 0 1 1 0 0 3 2 2 0 0 1 0 0 13 0 1224.6714 H9KVD1;Q96QD9 H9KVD1 8 20 FYTTD1 UAP56-interacting factor yes no 2 0.0011426 102.5 By matching By MS/MS 1 1 34797000 18250000 16546000 3778 1297 4269 9586;9587 9385 9385 2403 1 LVGIISSR DTGRMGSRLVGIISSR LVGIISSRDIDFLKEE R L V S R D 0 1 0 0 0 0 0 1 0 2 1 0 0 0 0 2 0 0 0 1 0 0 8 0 843.5178 H0Y4R1;P12268;E7ETK5 H0Y4R1 86 93 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 2 0.027978 81.191 By MS/MS 1 3088600 3088600 0 3779 1121 4270 9588 9386 9386 1 LVGLNLSPPMSPVQLPLR LQLIEQQKLVGLNLSP SPVQLPLRAWTEGAKR K L V L R A 0 1 1 0 0 1 0 1 0 0 5 0 1 0 4 2 0 0 0 2 0 0 18 0 1930.1074 Q8N0Z3 Q8N0Z3 754 771 SPICE1 Spindle and centriole-associated protein 1 yes yes 2 0.00022926 91.914 By MS/MS By MS/MS 2 2 20684000 12303000 8380900 3780 2454 4271;4272 9589;9590;9591;9592 9387;9388;9389 9389 991 5010;5011 3 LVGMDPEQASVTNQNEYAR DGCSFPTRLVGMDPEQ TNQNEYARSSGSNQPF R L V A R S 2 1 2 1 0 2 2 1 0 0 1 0 1 0 1 1 1 0 1 2 0 0 19 0 2120.9797 B4DRN8;Q5W0Z9 B4DRN8 233 251 ZDHHC20 Palmitoyltransferase;Probable palmitoyltransferase ZDHHC20 yes no 2;3 5.3006E-07 130.95 By MS/MS By MS/MS 3 3 81542000 39372000 42169000 3781 559 4273;4274 9593;9594;9595;9596;9597;9598 9390;9391;9392;9393;9394;9395;9396;9397 9392 223 8074 8 LVHDSLEDLQMTR DPEAIPVKLVHDSLED LEDLQMTRYHFAMNGK K L V T R Y 0 1 0 2 0 1 1 0 1 0 3 0 1 0 0 1 1 0 0 1 0 0 13 0 1555.7664 A0A087WYY3;Q9H7F0 A0A087WYY3 536 548 ATP13A3 Probable cation-transporting ATPase 13A3 yes no 2;3 0.00036801 112.24 By MS/MS By MS/MS 3 3 49944000 26332000 23612000 3782 131 4275;4276 9599;9600;9601;9602;9603;9604 9398;9399;9400;9401;9402 9398 49 218 5 LVHSGSGCRSPSLGSDLTFATR SYPLVATRLVHSGSGC SDLTFATRTGSRQGIE R L V T R T 1 2 0 1 1 0 0 3 1 0 3 0 0 1 1 5 2 0 0 1 0 0 22 1 2304.1281 Q13425 Q13425 384 405 SNTB2 Beta-2-syntrophin yes yes 3 0.0093545 52.19 By MS/MS By matching 1 1 37632000 20259000 17373000 3783 2058 4277 9605;9606 9403 9403 4055;4056;4057 1 LVIITAGAR YNVTANSKLVIITAGA VIITAGARQQEGESRL K L V A R Q 2 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 912.57565 P00338;F5GXH2;F5GYU2;F5GXY2 P00338 91 99 LDHA L-lactate dehydrogenase A chain yes no 2 0.0076718 108.46 By MS/MS By MS/MS 1 1 6833900 4429200 2404700 3784 1621 4278 9607;9608 9404;9405 9404 2 LVILANNCPALR MIRQGKAKLVILANNC ANNCPALRKSEIEYYA K L V L R K 2 1 2 0 1 0 0 0 0 1 3 0 0 0 1 0 0 0 0 1 0 0 12 0 1352.7598 E5RI99;P62888;E5RJH3 E5RI99 45 56 RPL30 60S ribosomal protein L30 yes no 2 3.7468E-07 134.48 By MS/MS By MS/MS 1 1 12765000 7438500 5327000 3785 783 4279 9609;9610 9406;9407 9406 2 LVINGNPITIFQERDPSK TVKAENGKLVINGNPI FQERDPSKIKWGDAGA K L V S K I 0 1 2 1 0 1 1 1 0 3 1 1 0 1 2 1 1 0 0 1 0 0 18 1 2040.1004 P04406 P04406 67 84 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 3 0.0010605 94.01 By MS/MS By MS/MS 2 2 30991000 16694000 14297000 3786 1635 4280;4281 9611;9612;9613;9614 9408;9409;9410;9411;9412;9413 9413 66 6 LVINLSSSVSTK LLRKEVLRLVINLSSS LSSSVSTKCHETGLLT R L V T K C 0 0 1 0 0 0 0 0 0 1 2 1 0 0 0 4 1 0 0 2 0 0 12 0 1246.7133 Q6R327 Q6R327 1619 1630 RICTOR Rapamycin-insensitive companion of mTOR yes yes 3 0.02644 46.352 By MS/MS 1 0 0 0 3787 2333 4282 9615 9414 9414 4711;4712 1 LVISNPYSR LSGSDDTKLVISNPYS VISNPYSRKVLTTIRS K L V S R K 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 2 0 0 1 1 0 0 9 0 1047.5713 Q58WW2;F2Z305 Q58WW2 75 83 DCAF6 DDB1- and CUL4-associated factor 6 yes no 2 0.011742 75.229 By MS/MS By MS/MS 1 1 9662500 6368400 3294100 3788 2210 4283 9616;9617 9415;9416 9415 4422 2 LVLAESPQPK GEHQQNSKLVLAESPQ LAESPQPKGKNK____ K L V P K G 1 0 0 0 0 1 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1080.6179 E7EUR8;A0A1B0GVL4;P78312 E7EUR8 993 1002 FAM193A Protein FAM193A yes no 2 0.0030845 92.112 By MS/MS By MS/MS 1 1 42045000 18977000 23068000 3789 429 4284 9618;9619 9417;9418 9418 803 2 LVLPAPQISDAELQEVVK EFTKKRSKLVLPAPQI AELQEVVKVGQASEIA K L V V K V 2 0 0 1 0 2 2 0 0 1 3 1 0 0 2 1 0 0 0 3 0 0 18 0 1948.0881 Q99459 Q99459 295 312 CDC5L Cell division cycle 5-like protein yes yes 2 0.0028029 77.795 By MS/MS 1 11080000 0 11080000 3790 2721 4285 9620 9419 9419 5648 1 LVMAYEEKEER EEHILDPRLVMAYEEK AYEEKEERDRASGYRK R L V E R D 1 1 0 0 0 0 4 0 0 0 1 1 1 0 0 0 0 0 1 1 0 0 11 1 1395.6704 B0QYP2;O95931 B0QYP2 53 63 CBX7 Chromobox protein homolog 7 yes no 2 0.020653 55.531 By matching By MS/MS 1 1 26539000 16959000 9579400 3791 515 4286 9621;9622 9420 9420 203 8062 1 LVNEAPVYSVYSK EALELYNKLVNEAPVY PVYSVYSKLHPPAHYP K L V S K L 1 0 1 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 2 3 0 0 13 0 1467.7609 O75886 O75886 364 376 STAM2 Signal transducing adapter molecule 2 yes yes 2 0.0011036 110.93 By MS/MS By MS/MS 2 2 63563000 30594000 32969000 3792 1558 4287;4288 9623;9624;9625;9626 9421;9422;9423 9422 2945;8206 3 LVNIMPYELTR PCNKFKNRLVNIMPYE IMPYELTRVCLQPIRG R L V T R V 0 1 1 0 0 0 1 0 0 1 2 0 1 0 1 0 1 0 1 1 0 0 11 0 1347.7221 H0Y6Z7;P10586;H0Y380;H0Y4H1;H0Y7Z9 H0Y6Z7 1316 1326 PTPRF Receptor-type tyrosine-protein phosphatase F yes no 2 0.0017649 82.261 By MS/MS By MS/MS 2 2 21532000 11756000 9775500 3793 1137 4289;4290 9627;9628;9629;9630 9424;9425;9426 9424 414 7200;8152 3 LVPFTEHMISVSAFTIMGEGPPTVLSVRTR QLSYVIRRLVPFTEHM TVLSVRTRQQVPSSIK R L V T R Q 1 2 0 0 0 0 2 2 1 2 2 0 2 2 3 3 4 0 0 4 0 0 30 1 3271.7097 A0A087WZU1;A0A087X0B9;Q9UMZ3 A0A087WZU1 536 565 PTPRQ Protein-tyrosine-phosphatase;Phosphatidylinositol phosphatase PTPRQ yes no 3 0.010814 50.723 By MS/MS 1 5323900 0 5323900 3794 145 4291 9631 9427 9427 54;55 236 1 LVPSQEETKLSVEESEAAGDGVDTK LEEKVRAKLVPSQEET AGDGVDTKVAQGATEK K L V T K V 2 0 0 2 0 1 5 2 0 0 2 2 0 0 1 3 2 0 0 3 0 0 25 1 2617.2607 P49321 P49321 418 442 NASP Nuclear autoantigenic sperm protein yes yes 3 0.0052518 53.589 By MS/MS By matching 1 1 22435000 13238000 9197600 3795 1851 4292 9632;9633 9428 9428 3561 1 LVQAFQFTDK RSVDETLRLVQAFQFT QAFQFTDKHGE_____ R L V D K H 1 0 0 1 0 2 0 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 10 0 1195.6237 A0A0A0MSI0;Q06830;A0A0A0MRQ5 A0A0A0MSI0 159 168 PRDX1 Peroxiredoxin-1 yes no 2 0.00027559 146.79 By MS/MS By MS/MS 1 1 51454000 28930000 22524000 3796 247 4293 9634;9635 9429;9430 9429 2 LVQDVANNTNEEAGDGTTTATVLAR KYKNIGAKLVQDVANN TTATVLARSIAKEGFE K L V A R S 4 1 3 2 0 1 2 2 0 0 2 0 0 0 0 0 5 0 0 3 0 0 25 0 2559.2413 P10809;E7EXB4;E7ESH4;C9JL25 P10809 97 121 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2;3 2.2149E-06 124.28 By MS/MS By MS/MS 2 2 60442000 28072000 32371000 3797 1677 4294 9636;9637;9638;9639 9431;9432;9433;9434 9433 4 LVQNGTEPSSLPFLDPNAR EQGSLLGKLVQNGTEP PFLDPNARPLVPEVSI K L V A R P 1 1 2 1 0 1 1 1 0 0 3 0 0 1 3 2 1 0 0 1 0 0 19 0 2054.0433 F8VPD4;P27708 F8VPD4 138 156 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 2 0.0047204 62.14 By MS/MS By matching 1 1 10194000 6120700 4073300 3798 1000 4295 9640;9641 9435 9435 44;45 1879 1 LVRLSSDSFAR SDPALRSKLVRLSSDS LSSDSFARLVELFCSR K L V A R L 1 2 0 1 0 0 0 0 0 0 2 0 0 1 0 3 0 0 0 1 0 0 11 1 1249.6779 A0A087WSV0;Q9HB09 A0A087WSV0 154 164 BCL2L12 Bcl-2-like protein 12 yes no 2 0.029807 68.262 By MS/MS By matching 1 1 106170000 54131000 52041000 3799 25 4296 9642;9643 9436 9436 1 LVSFHDDSDEDLLHI QKTVSSTKLVSFHDDS SDEDLLHI________ K L V H I - 0 0 0 4 0 0 1 0 2 1 3 0 0 1 0 2 0 0 0 1 0 0 15 0 1753.8159 P11717 P11717 2477 2491 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2;3 5.2484E-67 206.32 By MS/MS By MS/MS 3 3 574570000 317650000 256930000 3800 1683 4297;4298 9644;9645;9646;9647;9648;9649 9437;9438;9439;9440;9441;9442 9438 3180;3181 6 LVTSGAESGNLNTSPSSNQTR DSFKQLAKLVTSGAES SPSSNQTRNSEKFEKP K L V T R N 1 1 3 0 0 1 1 2 0 0 2 0 0 0 1 5 3 0 0 1 0 0 21 0 2119.0142 Q8NHV4 Q8NHV4 503 523 NEDD1 Protein NEDD1 yes yes 2 9.1922E-05 119 By MS/MS By MS/MS 1 1 28051000 11840000 16211000 3801 2527 4299 9650;9651 9443;9444 9444 5162 2 LVTSPQSEPPAPFPPPR PVTPSPSKLVTSPQSE PAPFPPPRSTSSPYHA K L V P R S 1 1 0 0 0 1 1 0 0 0 1 0 0 1 7 2 1 0 0 1 0 0 17 0 1815.9519 H0YN99;Q9H792 H0YN99 858 874 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.018349 62.088 By MS/MS By matching 1 1 10824000 5699300 5124300 3802 1218 4300 9652;9653 9445 9445 2276 1 LVVPASQCGSLIGK SRPPVTLRLVVPASQC QCGSLIGKGGCKIKEI R L V G K G 1 0 0 0 1 1 0 2 0 1 2 1 0 0 1 2 0 0 0 2 0 0 14 0 1427.7806 Q15366;H3BRU6;F8VZX2;F8W0G4;F8VXH9;F8W1G6;H3BND9;J3QT27;E9PFP8;P57721 Q15366 102 115 PCBP2;PCBP3 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 yes no 2 0.0085671 82.417 By MS/MS By matching 1 1 11642000 6252300 5389500 3803 2134 4301 9654;9655 9446 9446 1 LVYENINGLSIPSASGVR RDAPSVNKLVYENING IPSASGVRRGRLTSTS K L V V R R 1 1 2 0 0 0 1 2 0 2 2 0 0 0 1 3 0 0 1 2 0 0 18 0 1888.0054 Q8WU20 Q8WU20 304 321 FRS2 Fibroblast growth factor receptor substrate 2 yes yes 2 0.0035827 81.619 By MS/MS By matching 1 1 25326000 11194000 14132000 3804 2550 4302 9656;9657 9447 9447 8404 1 LWAFPSDSSR PTVNPRKKLWAFPSDS AFPSDSSRDLPSPKKA K L W S R D 1 1 0 1 0 0 0 0 0 0 1 0 0 1 1 3 0 1 0 0 0 0 10 0 1164.5564 C9JA69;Q8WY36;C9JYU6;C9JZA0;C9J8D0 C9JA69 170 179 BBX HMG box transcription factor BBX yes no 2 0.0026354 103.43 By MS/MS By MS/MS 1 1 13081000 6592100 6488700 3805 651 4303 9658;9659 9448;9449 9448 1210;1211 2 LWAQDGSEDEPPKDSDGEDPETAAVGCR SKEMTGARLWAQDGSE ETAAVGCRGPTPGQAP R L W C R G 3 1 0 5 1 1 4 3 0 0 1 1 0 0 3 2 1 1 0 1 0 0 28 1 3030.2785 H7C3J6;A0A087WXB3;A0A087X223;H7BY14;A0A087WYU3;A0A087X1J5;A0A087WYW1;Q96NU1 H7C3J6 282 309 SAMD11 Sterile alpha motif domain-containing protein 11 yes no 3 0.00064771 61.417 By MS/MS By MS/MS 1 1 14324000 8627000 5697400 3806 103 4304 9660;9661 9450;9451 9450 184;185 2 LWDLTTGTTTR GSWDGTLRLWDLTTGT LTTGTTTRRFVGHTKD R L W T R R 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 5 1 0 0 0 0 11 0 1263.6459 D6RFX4;D6R9Z1;D6R9L0;P63244;D6RHH4;J3KPE3;H0Y8W2;H0YAF8;D6RAU2;E9PD14;D6RFZ9 D6RFX4 48 58 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.025755 72.006 By MS/MS By matching 1 1 9504900 4206500 5298400 3807 728 4305 9662;9663 9452 9452 1 LWGNAYPTVKKMNTMR L W M R 1 1 2 0 0 0 0 1 0 0 1 2 2 0 1 0 2 1 1 1 0 0 16 2 1908.9702 REV__A0A0G2JRD1 yes no 2 0.028991 50.149 By MS/MS 1 8774100 8774100 0 + 3808 3165 4306 9664 9453 9453 1256 1 LWMEAMDGKEPIYHSPITK ALSEANRRLWMEAMDG IYHSPITKQQEMELNE R L W T K Q 1 0 0 1 0 0 2 1 1 2 1 2 2 0 2 1 1 1 1 0 0 0 19 1 2245.0911 O60890 O60890 358 376 OPHN1 Oligophrenin-1 yes yes 3 0.00048709 93.342 By MS/MS 1 3851900 3851900 0 3809 1533 4307 9665 9454 9454 8203 1 LWNLNNYR THQRHDGKLWNLNNYR LWNLNNYRTDMIQALG K L W Y R T 0 1 3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 1 0 0 0 8 0 1091.5512 Q6P2Q9;I3L3Z8 Q6P2Q9 1464 1471 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 2 0.024421 86.866 By MS/MS 1 2051000 0 2051000 3810 2318 4308 9666 9455 9455 1 LWQGMFNKESK FTQRVVDKLWQGMFNK GMFNKESKLLIDFIIQ K L W S K L 0 0 1 0 0 1 1 1 0 0 1 2 1 1 0 1 0 1 0 0 0 0 11 1 1366.6704 Q8IZQ1 Q8IZQ1 2056 2066 WDFY3 WD repeat and FYVE domain-containing protein 3 yes yes 2 0.030251 44.349 By matching By MS/MS 1 1 5077600 2390200 2687400 3811 2449 4309 9667;9668 9456 9456 990 1 LWSRSLK VYTLTYGKLWSRSLKL KLWSRSLKLAYTLLNK K L W L K L 0 1 0 0 0 0 0 0 0 0 2 1 0 0 0 2 0 1 0 0 0 0 7 1 888.51814 Q14689;Q9P265 Q14689 370 376 DIP2A;DIP2B Disco-interacting protein 2 homolog A;Disco-interacting protein 2 homolog B yes no 2 0.025378 68.224 By MS/MS 1 0 0 0 3812 2104 4310 9669 9457 9457 4163 1 LYDLNMPAYVK SFVDPGERLYDLNMPA LNMPAYVKF_______ R L Y V K F 1 0 1 1 0 0 0 0 0 0 2 1 1 0 1 0 0 0 2 1 0 0 11 0 1325.669 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333 C9K098 104 114 NCK1 Cytoplasmic protein NCK1 yes no 2 3.352E-06 126.31 By MS/MS By MS/MS 2 2 139740000 72189000 67555000 3813 645 4311;4312 9670;9671;9672;9673 9458;9459;9460;9461;9462 9460 253 8088 5 LYDLPDEPFTR IRKKWNSKLYDLPDEP LPDEPFTRQFYFVHSA K L Y T R Q 0 1 0 2 0 0 1 0 0 0 2 0 0 1 2 0 1 0 1 0 0 0 11 0 1364.6612 Q96NW4 Q96NW4 927 937 ANKRD27 Ankyrin repeat domain-containing protein 27 yes yes 2 0.0025117 103.26 By MS/MS By MS/MS 1 1 25629000 14226000 11403000 3814 2691 4313 9674;9675 9463;9464;9465 9464 8427 3 LYEALTPVH MVELAAQRLYEALTPV YEALTPVH________ R L Y V H - 1 0 0 0 0 0 1 0 1 0 2 0 0 0 1 0 1 0 1 1 0 0 9 0 1041.5495 G5E9W3;Q9UKF6 G5E9W3 639 647 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 2 0.0012392 128.36 By MS/MS By MS/MS 1 1 14452000 9527700 4924500 3815 1103 4314 9676;9677 9466;9467 9467 7187 2 LYEEDDLDRLEQMEDSEGTVR FKPGLDMRLYEEDDLD EDSEGTVRQIGAFSEG R L Y V R Q 0 2 0 4 0 1 5 1 0 0 3 0 1 0 0 1 1 0 1 1 0 0 21 1 2541.1177 H0YFE4;Q86W92 H0YFE4 181 201 PPFIBP1 Liprin-beta-1 yes no 3 2.2468E-106 211.67 By MS/MS By MS/MS 2 3 67040000 35878000 31162000 3816 1178 4315;4316 9678;9679;9680;9681;9682 9468;9469;9470;9471;9472 9472 426 8158 4 LYEWISIDKDEAGAK ERLGTRERLYEWISID DKDEAGAKSKAPSVSR R L Y A K S 2 0 0 2 0 0 2 1 0 2 1 2 0 0 0 1 0 1 1 0 0 0 15 1 1736.8621 O15357;A0A0A0MTP6 O15357 885 899 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 3 0.0027395 81.128 By MS/MS 1 8627400 8627400 0 3817 1479 4317 9683 9473 9473 8194 1 LYFCVDR GKSGGRFRLYFCVDRG RLYFCVDRGATKECKE R L Y D R G 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 7 0 971.45349 O14654 O14654 655 661 IRS4 Insulin receptor substrate 4 yes yes 2 0.0097872 149.4 By MS/MS By MS/MS 1 1 74896000 37611000 37285000 3818 1453 4318 9684;9685 9474;9475 9475 8183 2 LYGSPTQIGPSYR LPPLQTPKLYGSPTQI TQIGPSYRGMINVSTS K L Y Y R G 0 1 0 0 0 1 0 2 0 1 1 0 0 0 2 2 1 0 2 0 0 0 13 0 1437.7252 E7EWD6;Q76L83 E7EWD6 1288 1300 ASXL2 Putative Polycomb group protein ASXL2 yes no 2 0.016354 89.624 By MS/MS 1 0 0 0 3819 834 4319 9686 9476 9476 1557 1 LYHRASDTPSGLSPTDTMGTAMR WPFLPLIRLYHRASDT DTMGTAMRVLQWVLVL R L Y M R V 2 2 0 2 0 0 0 2 1 0 2 0 2 0 2 3 4 0 1 0 0 0 23 1 2464.1475 Q9BWH6 Q9BWH6 1109 1131 RPAP1 RNA polymerase II-associated protein 1 yes yes 3 0.0071314 60.325 By MS/MS 1 3469800 0 3469800 3820 2766 4320 9687 9477 9477 1100 7832;8451 1 LYIQNYTSAVPGTCLTIR APNEFPHKLYIQNYTS PGTCLTIRKWLFTTEE K L Y I R K 1 1 1 0 1 1 0 1 0 2 2 0 0 0 1 1 3 0 2 1 0 0 18 0 2069.0616 A0A0C4DFU6;Q96L92 Q96L92 248 265 SNX27 Sorting nexin-27 no no 2;3 0.00013774 123.68 By MS/MS By MS/MS 2 2 52191000 27867000 24324000 3821 298;2682 4321 9688;9689;9690;9691 9478;9479;9480;9481;9482;9483 9483 8023 6 LYLPQEPTSEETPR TPPPKPPRLYLPQEPT PTSEETPRTKRPHMEP R L Y P R T 0 1 0 0 0 1 3 0 0 0 2 0 0 0 3 1 2 0 1 0 0 0 14 0 1658.8152 Q6P5Z2 Q6P5Z2 516 529 PKN3 Serine/threonine-protein kinase N3 yes yes 2 0.0065462 83.045 By MS/MS By MS/MS 1 1 19830000 10397000 9433200 3822 2324 4322 9692;9693 9484;9485 9485 8376 2 LYLPVQNK DELPAEFKLYLPVQNK LYLPVQNKAKQ_____ K L Y N K A 0 0 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 0 8 0 973.55967 Q9Y6A4 Q9Y6A4 183 190 CFAP20 Cilia- and flagella-associated protein 20 yes yes 2 0.013745 76.847 By MS/MS 1 0 0 0 3823 3145 4323 9694 9486 9486 8515 1 LYMKRNSLTSLR EGLQYLERLYMKRNSL RNSLTSLRLAI_____ R L Y L R L 0 2 1 0 0 0 0 0 0 0 3 1 1 0 0 2 1 0 1 0 0 0 12 2 1480.8184 H0YKS9 H0YKS9 46 57 LRRC28 yes yes 3 0.022672 53.013 By MS/MS 1 0 0 0 3824 1206 4324 9695 9487 9487 439 2249;2250 1 LYNSEESRPYTNK LADFGLARLYNSEESR ESRPYTNKVITLWYRP R L Y N K V 0 1 2 0 0 0 2 0 0 0 1 1 0 0 1 2 1 0 2 0 0 0 13 1 1599.7529 J3QSD7;Q9NYV4 J3QSD7 882 894 CDK12 Cyclin-dependent kinase 12 yes no 2;3 0.0039251 117.48 By MS/MS By MS/MS 1 2 81901000 37654000 44247000 3825 1361 4325 9696;9697;9698 9488;9489 9489 7258 2 LYNTRGKSLTQNSAPSR THDSSRQRLYNTRGKS TQNSAPSRSYLRKNPD R L Y S R S 1 2 2 0 0 1 0 1 0 0 2 1 0 0 1 3 2 0 1 0 0 0 17 2 1891.9864 F5H6R4;P17031 F5H6R4 107 123 ZNF26 Zinc finger protein 26 yes no 3 0.022321 58.093 By MS/MS 1 0 0 0 3826 984 4326 9699 9490 9490 1845 1 LYPPGDEEEAELADSSGLYHEGSPSPGSPWK PDDLSLLKLYPPGDEE PSPGSPWKTKLRTKDK K L Y W K T 2 0 0 2 0 0 5 4 1 0 3 1 0 0 5 5 0 1 2 0 0 0 31 0 3300.4735 Q8NCF5 Q8NCF5 146 176 NFATC2IP NFATC2-interacting protein yes yes 3 0.0024607 51.773 By MS/MS By matching 1 1 49430000 25646000 23784000 3827 2502 4327 9700;9701 9491 9491 5110 1 LYSEVAEER ALQQQRQRLYSEVAEE YSEVAEERERLGQQAA R L Y E R E 1 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1094.5244 Q9UPN4;I3L2X7 Q9UPN4 796 804 CEP131 Centrosomal protein of 131 kDa yes no 2 0.0070298 83.045 By MS/MS By MS/MS 1 1 11334000 5081900 6252500 3828 3064 4328 9702;9703 9492;9493 9492 6468 2 LYSILQGDSPTK AHVYYRWKLYSILQGD LQGDSPTKWRTEDFRM K L Y T K W 0 0 0 1 0 1 0 1 0 1 2 1 0 0 1 2 1 0 1 0 0 0 12 0 1320.6925 O15042 O15042 477 488 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 2 0.00068766 106.29 By MS/MS By MS/MS 1 1 25299000 25299000 0 3829 1467 4329 9704;9705 9494;9495 9494 2736 2 LYSILQGDSPTKWR AHVYYRWKLYSILQGD GDSPTKWRTEDFRMFK K L Y W R T 0 1 0 1 0 1 0 1 0 1 2 1 0 0 1 2 1 1 1 0 0 0 14 1 1662.873 O15042 O15042 477 490 U2SURP U2 snRNP-associated SURP motif-containing protein yes yes 2;3 5.0556E-12 143.31 By MS/MS By MS/MS 2 2 43831000 24377000 19454000 3830 1467 4330 9706;9707;9708;9709 9496;9497;9498;9499;9500 9499 2736 5 LYSSEESRPYTNK LADFGLARLYSSEESR ESRPYTNKVITLWYRP R L Y N K V 0 1 1 0 0 0 2 0 0 0 1 1 0 0 1 3 1 0 2 0 0 0 13 1 1572.742 Q14004;Q9BVE2;A0A087X209 Q14004 861 873 CDK13 Cyclin-dependent kinase 13 yes no 2 0.00045326 118.52 By MS/MS By MS/MS 1 1 29773000 16248000 13524000 3831 2080 4331 9710;9711 9501;9502 9501 4103;7567 2 LYTLVLTDPDAPSR WDGLDSGKLYTLVLTD TDPDAPSRKDPKYREW K L Y S R K 1 1 0 2 0 0 0 0 0 0 3 0 0 0 2 1 2 0 1 1 0 0 14 0 1559.8195 P30086 P30086 63 76 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 2 0.00031748 120.77 By MS/MS By MS/MS 1 1 15500000 7586100 7914300 3832 1779 4332 9712;9713 9503;9504 9503 2 LYTLVTYVPVTTFK EDEDSPNKLYTLVTYV YVPVTTFKNLQTVNVD K L Y F K N 0 0 0 0 0 0 0 0 0 0 2 1 0 1 1 0 4 0 2 3 0 0 14 0 1643.9174 P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8 P62899 102 115 RPL31 60S ribosomal protein L31 yes no 2 0.00021433 122.42 By MS/MS 1 6700600 0 6700600 3833 1948 4333 9714 9505 9505 1 MAAGPHSALELLIPVGASQSMGVPRTPSR VAWEQTPRMAAGPHSA GVPRTPSRTVLF____ R M A S R T 4 2 0 0 0 1 1 3 1 1 3 0 2 0 4 4 1 0 0 2 0 0 29 1 2929.5266 C9J295 C9J295 20 48 NEU4 yes yes 3 0.029172 46.862 By MS/MS 1 0 0 0 3834 629 4334 9715 9506 9506 244;245 1 MAAVCIMEVNLLPSKVTHLLIK AIGLAVSRMAAVCIME KVTHLLIKRPPFFHYR R M A I K R 2 0 1 0 1 0 1 0 1 2 4 2 2 0 1 1 1 0 0 3 0 0 22 1 2479.3729 Q96PH1 Q96PH1 443 464 NOX5 NADPH oxidase 5 yes yes 2 0.029092 51.546 By MS/MS 1 0 0 0 3835 2695 4335 9716 9507 9507 1070 1 MAEAPASPAPLSPLEVELDPEFEPQSRPR ________________ FEPQSRPRSCTWPLQR - M A P R S 4 2 0 1 0 1 5 0 0 0 3 0 1 1 7 3 0 0 0 1 0 0 29 1 3159.5547 O43524;J3KS91 O43524 1 29 FOXO3;ZNF286B Forkhead box protein O3 yes no 3 0.0027404 55.051 By MS/MS 1 8625700 0 8625700 3836 1503 4336 9717 9508 9508 541 2813;2814 1 MAEESSSSSSSSSPTAATSQQQQLK EFVGFDAKMAEESSSS TSQQQQLKNKSILISS K M A L K N 3 0 0 0 0 4 2 0 0 0 1 1 1 0 1 10 2 0 0 0 0 0 25 0 2543.1293 K4DI93;Q13620 K4DI93 121 145 CUL4B Cullin-4B yes no 2 5.7814E-06 85.976 By MS/MS By MS/MS 1 1 15768000 7681000 8087200 3837 1364 4337 9718;9719 9509;9510 9510 475 2530;2531 2 MAEQSDEAVKYYTLEEIQK ________________ YTLEEIQKHNHSKSTW - M A Q K H 2 0 0 1 0 2 4 0 0 1 1 2 1 0 0 1 1 0 2 1 0 0 19 1 2274.0726 P00167 P00167 1 19 CYB5A Cytochrome b5 yes yes 2 0.026117 55.899 By MS/MS 1 0 0 0 3838 1620 4338 9720 9511 9511 3066 1 MAESPCSPSGQQPPSPPSPDELPANVK PSGAAGGKMAESPCSP DELPANVKQAYRAFAA K M A V K Q 2 0 1 1 1 2 2 1 0 0 1 1 1 0 8 5 0 0 0 1 0 0 27 0 2803.2793 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YCG0 A0A0G2JNZ2 1292 1318 SCRIB Protein scribble homolog yes no 3 0.011188 46.92 By MS/MS 1 10511000 0 10511000 3839 361 4339 9721 9512 9512 142 655;656 1 MAGDSFHSRFPYSK TDRDPLQRMAGDSFHS HSRFPYSKSDPLPGHG R M A S K S 1 1 0 1 0 0 0 1 1 0 0 1 1 2 1 3 0 0 1 0 0 0 14 1 1628.7406 F5GYR0;Q6H8Q1 F5GYR0 534 547 ABLIM2 Actin-binding LIM protein 2 yes no 2 0.0051315 75.998 By MS/MS 1 0 0 0 3840 949 4340 9722 9513 9513 351 1783;1784;8134 1 MAGIFDVNTCYGSPQSPQLIR FGSSVMNRMAGIFDVN PQSPQLIRRGPRLWTS R M A I R R 1 1 1 1 1 2 0 2 0 2 1 0 1 1 2 2 1 0 1 1 0 0 21 0 2353.1195 Q9BTX1 Q9BTX1 459 479 NDC1 Nucleoporin NDC1 yes yes 3 0.0024392 60.938 By matching By MS/MS 1 1 15174000 9441700 5732000 3841 2752 4341 9723;9724 9514 9514 1094 5725 1 MAGNEALSPTSPFR MAQKISERMAGNEALS LSPTSPFREGRPGEWR R M A F R E 2 1 1 0 0 0 1 1 0 0 1 0 1 1 2 2 1 0 0 0 0 0 14 0 1476.7031 Q86WR7;D3DRR9 Q86WR7 205 218 PROSER2;C10orf47 Proline and serine-rich protein 2 yes no 2 1.8867E-07 131.72 By MS/MS By MS/MS 3 4 87538000 38831000 48707000 3842 2412 4342;4343;4344;4345 9725;9726;9727;9728;9729;9730;9731 9515;9516;9517;9518;9519;9520;9521 9517 977 4920;4921;7701 6 MALPPQEDATASPPR ETAESKEKMALPPQED DATASPPRQKDKFSPF K M A P R Q 3 1 0 1 0 1 1 0 0 0 1 0 1 0 4 1 1 0 0 0 0 0 15 0 1579.7664 Q9UQ35 Q9UQ35 1168 1182 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 6.8275E-22 160.09 By MS/MS By MS/MS 12 16 412630000 170210000 242420000 3843 3074 4346;4347 9732;9733;9734;9735;9736;9737;9738;9739;9740;9741;9742;9743;9744;9745;9746;9747;9748;9749;9750;9751;9752;9753;9754;9755;9756;9757;9758;9759 9522;9523;9524;9525;9526;9527;9528;9529;9530;9531;9532;9533;9534;9535;9536;9537;9538;9539;9540;9541;9542;9543;9544;9545;9546;9547;9548;9549;9550;9551;9552;9553;9554;9555;9556;9557;9558;9559;9560;9561;9562;9563;9564;9565;9566;9567;9568;9569 9546 1225 6529;7928 46 MALPPQEDATASPPRQK ETAESKEKMALPPQED TASPPRQKDKFSPFPV K M A Q K D 3 1 0 1 0 2 1 0 0 0 1 1 1 0 4 1 1 0 0 0 0 0 17 1 1835.92 Q9UQ35 Q9UQ35 1168 1184 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.025312 49.768 By MS/MS By matching 1 1 41534000 23282000 18253000 3844 3074 4348 9760;9761 9570 9570 1225 6529;7928 0 MALSIVDFR SVRGLSEKMALSIVDF ALSIVDFRREHGPFRS K M A F R R 1 1 0 1 0 0 0 0 0 1 1 0 1 1 0 1 0 0 0 1 0 0 9 0 1050.5532 Q7L9B9 Q7L9B9 157 165 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 yes yes 2 0.001367 102.53 By MS/MS By MS/MS 1 1 4814100 2910700 1903500 3845 2368 4349 9762;9763 9571;9572 9572 952 4800 2 MANSSPVLSK SAGRSQKKMANSSPVL NSSPVLSKVPGYGLQV K M A S K V 1 0 1 0 0 0 0 0 0 0 1 1 1 0 1 3 0 0 0 1 0 0 10 0 1032.5274 Q9NXE8 Q9NXE8 214 223 CWC25 Pre-mRNA-splicing factor CWC25 homolog yes yes 2 0.00080433 103.46 By MS/MS By MS/MS 2 2 32146000 17920000 14226000 3846 2942 4350;4351 9764;9765;9766;9767 9573;9574;9575;9576 9574 1169 6197;6198 4 MAPALSGANLTSPR PASLTSARMAPALSGA GANLTSPRVPLSAYER R M A P R V 3 1 1 0 0 0 0 1 0 0 2 0 1 0 2 2 1 0 0 0 0 0 14 0 1384.7133 Q9UQ35 Q9UQ35 2371 2384 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.00040553 115.58 By MS/MS By MS/MS 3 2 267360000 137930000 129430000 3847 3074 4352;4353 9768;9769;9770;9771;9772 9577;9578;9579;9580;9581;9582;9583;9584 9579 1226 6530;6531;7929 8 MAPALSGANLTSPRVPLSAYER PASLTSARMAPALSGA VPLSAYERVSGRTSPP R M A E R V 4 2 1 0 0 0 1 1 0 0 3 0 1 0 3 3 1 0 1 1 0 0 22 1 2300.1947 Q9UQ35 Q9UQ35 2371 2392 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.01202 53.779 By MS/MS By matching 1 1 12398000 7325000 5073200 3848 3074 4354 9773;9774 9585;9586 9585 1226 6530;6531;7929 2 MAPPVDDLSPK NCKICIGRMAPPVDDL PVDDLSPKKVKVVVGV R M A P K K 1 0 0 2 0 0 0 0 0 0 1 1 1 0 3 1 0 0 0 1 0 0 11 0 1168.5798 Q92576;E7EVH3;E7ER40 Q92576 1125 1135 PHF3 PHD finger protein 3 yes no 2 0.00064349 97.957 By MS/MS By MS/MS 2 2 167750000 79712000 88034000 3849 2585 4355;4356 9775;9776;9777;9778 9587;9588;9589;9590;9591 9588 1034 5306 5 MAPTPIPTRSPSDSSTASTPVAEQIER SHLDSHRRMAPTPIPT PVAEQIERALDEVTSS R M A E R A 3 2 0 1 0 1 2 0 0 2 0 0 1 0 5 5 4 0 0 1 0 0 27 1 2825.3865 Q16643;D6R9Q9 Q16643 328 354 DBN1 Drebrin yes no 3 4.3382E-16 143.25 By MS/MS By MS/MS 3 3 468980000 236910000 232070000 3850 2166 4357;4358 9779;9780;9781;9782;9783;9784 9592;9593;9594;9595;9596 9592 868 4311;4312;4313;4314;7612;7613;7614 5 MASNIFGTPEENQASWAK EQPVRKNKMASNIFGT ENQASWAKSAGAKSSG K M A A K S 3 0 2 0 0 1 2 1 0 1 0 1 1 1 1 2 1 1 0 0 0 0 18 0 1979.9047 Q9UK76;J3KSH8;J3KT51 Q9UK76 47 64 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 2 2.1483E-06 128.1 By MS/MS By MS/MS 2 2 78399000 37923000 40476000 3851 3020 4359;4360 9785;9786;9787;9788 9597;9598;9599;9600;9601 9598 1202 7906 5 MASPPAPSPAPPAISPIIK RVGAPPRRMASPPAPS PAISPIIKNAISLPQL R M A I K N 4 0 0 0 0 0 0 0 0 3 0 1 1 0 7 3 0 0 0 0 0 0 19 0 1841.0121 Q00587 Q00587 99 117 CDC42EP1 Cdc42 effector protein 1 yes yes 2;3 0.0026379 66.215 By MS/MS By MS/MS 1 2 24124000 10265000 13859000 3852 1974 4361 9789;9790;9791 9602;9603;9604;9605 9602 778 3782 4 MASTEGANNMPK ________________ EGANNMPKQVEVRMHD - M A P K Q 2 0 2 0 0 0 1 1 0 0 0 1 2 0 1 1 1 0 0 0 0 0 12 0 1249.5431 P43004 P43004 1 12 SLC1A2 Excitatory amino acid transporter 2 yes yes 1 0.030015 42.864 By MS/MS 1 5875100 5875100 0 3853 1831 4362 9792 9606 9606 695 0 MATEVAADALGEEWK LRTFYEKRMATEVAAD DALGEEWKGYVVRISG R M A W K G 4 0 0 1 0 0 3 1 0 0 1 1 1 0 0 0 1 1 0 1 0 0 15 0 1619.7501 P62753;A2A3R7;A2A3R5 P62753 32 46 RPS6 40S ribosomal protein S6 yes no 2;3 1.4131E-07 134.49 By MS/MS By MS/MS 3 2 18341000 9227300 9113500 3854 1944 4363;4364 9793;9794;9795;9796;9797 9607;9608;9609;9610 9609 762 4 MAVVDIYHSR SDILHALKMAVVDIYH VVDIYHSRLKERQRRK K M A S R L 1 1 0 1 0 0 0 0 1 1 0 0 1 0 0 1 0 0 1 2 0 0 10 0 1189.5914 A0A087WTV5;A0A087WWR4;A0A024R0Y4;O75478 A0A087WTV5 125 134 TADA2A;TADA2L Transcriptional adapter 2-alpha yes no 1 0.024448 48.188 By MS/MS By matching 1 1 12436000 3967100 8468700 3855 1 4365 9798;9799 9611 9611 0 2 0 MCSLALQQLISMDLFWRLFFVCGQEGLR ________________ VCGQEGLRALEATGMM - M C L R A 1 2 0 1 2 3 1 2 0 1 6 0 2 3 0 2 0 1 0 1 0 0 28 1 3417.6858 A3KFI1;A0A087WTY6 A3KFI1 1 28 NBL1 yes no 3 0.029959 45.579 By MS/MS 1 17540000 0 17540000 3856 47 4366 9800 9612 9612 19 0 MDAPASGSACSGLNKQEPGGSHGSETEDTGR IVRSSGGRMDAPASGS SETEDTGRSLPSKKER R M D G R S 3 1 1 2 1 1 3 6 1 0 1 1 1 0 2 5 2 0 0 0 0 0 31 1 3089.3051 Q9UKJ3 Q9UKJ3 630 660 GPATCH8 G patch domain-containing protein 8 yes yes 3 0.024711 43.936 By MS/MS 1 8441400 8441400 0 3857 3025 4367 9801 9613 9613 1203 6377 1 MDELQLFR VVSLSQPKMDELQLFR MDELQLFRGDTVLLKG K M D F R G 0 1 0 1 0 1 1 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 8 0 1050.5168 P55072;C9JUP7;C9IZA5 P55072 46 53 VCP Transitional endoplasmic reticulum ATPase yes no 2 0.026085 115.46 By MS/MS 1 0 0 0 3858 1908 4368 9802 9614 9614 1 MDKYNFDTMIYVTDK DLAAAIDRMDKYNFDT TMIYVTDKGQKKHFQQ R M D D K G 0 0 1 3 0 0 0 0 0 1 0 2 2 1 0 0 2 0 2 1 0 0 15 1 1882.8481 Q5T160 Q5T160 334 348 RARS2 Probable arginine--tRNA ligase, mitochondrial yes yes 3 0.01565 49.149 By matching By MS/MS 1 1 108460000 57263000 51200000 3859 2236 4369 9803;9804 9615 9615 893 7641;8366 1 MDNVTGGMETSRQTYDDK LGYKVVEKMDNVTGGM SRQTYDDKLTAVESDL K M D D K L 0 1 1 3 0 1 1 2 0 0 0 1 2 0 0 1 3 0 1 1 0 0 18 1 2046.8623 Q5KU26 Q5KU26 65 82 COLEC12 Collectin-12 yes yes 2 0.011998 66.738 By MS/MS 1 0 0 0 3860 2227 4370 9805 9616 9616 890 7638;8365 1 MDRTPPPPTLSPAAITVGR EESDECVRMDRTPPPP PAAITVGRGEDLTSEH R M D G R G 2 2 0 1 0 0 0 1 0 1 1 0 1 0 5 1 3 0 0 1 0 0 19 1 1976.0513 H7C4H9;E7EX82;Q8NDX5 H7C4H9 80 98 PHC3 Polyhomeotic-like protein 3 yes no 3 0.00032171 83.435 By MS/MS By MS/MS 2 1 28432000 16670000 11762000 3861 840 4371;4372 9806;9807;9808 9617;9618;9619;9620 9620 320 1568;7100;7101 4 MDSFDEDLAR REAQVNVRMDSFDEDL SFDEDLARPSGLLAQE R M D A R P 1 1 0 3 0 0 1 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 10 0 1197.4972 Q9Y2W1 Q9Y2W1 573 582 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.00052788 129.74 By MS/MS By MS/MS 2 2 140630000 69733000 70899000 3862 3096 4373;4374 9809;9810;9811;9812 9621;9622;9623;9624 9624 1234 6650 4 MDSFDEDLARPSGLLAQER REAQVNVRMDSFDEDL SGLLAQERKLCRDLVH R M D E R K 2 2 0 3 0 1 2 1 0 0 3 0 1 1 1 2 0 0 0 0 0 0 19 1 2149.011 Q9Y2W1 Q9Y2W1 573 591 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 8.4562E-05 101.48 By MS/MS By MS/MS 3 3 679920000 352140000 327780000 3863 3096 4375;4376 9813;9814;9815;9816;9817;9818 9625;9626;9627;9628;9629 9628 1234 6650 5 MDSNFGLAGLPGSPK PVDMESTRMDSNFGLA AGLPGSPKKRVRIECK R M D P K K 1 0 1 1 0 0 0 3 0 0 2 1 1 1 2 2 0 0 0 0 0 0 15 0 1489.7235 O43463 O43463 379 393 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 yes yes 2 2.0611E-08 134.4 By MS/MS By MS/MS 2 2 58579000 27753000 30826000 3864 1501 4377;4378 9819;9820;9821;9822 9630;9631;9632;9633;9634 9630 538 2801 5 MDVAVLSYCVRCCPAGQALRLISCR LQRVRFCRMDVAVLSY ALRLISCRLVAAQEKK R M D C R L 3 3 0 1 4 1 0 1 0 1 3 0 1 0 1 2 0 0 1 3 0 0 25 2 2954.4169 P59044 P59044 654 678 NLRP6 NACHT, LRR and PYD domains-containing protein 6 yes yes 3 0.024942 45.784 By MS/MS 1 5320000 0 5320000 3865 1923 4379 9823 9635 9635 3716 1 MDVYVSIK FRHHVQCRMDVYVSIK MDVYVSIKGLASGRLT R M D I K G 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 1 0 0 1 2 0 0 8 0 953.4892 H7C5E6 H7C5E6 153 160 SLC26A8 yes yes 2 0.0067597 81.191 By MS/MS 1 0 0 0 3866 1291 4380 9824 9636 9636 465 2389 1 MEGAEINKSLLALK SSADRQTRMEGAEINK NKSLLALKECIRALGQ R M E L K E 2 0 1 0 0 0 2 1 0 1 3 2 1 0 0 1 0 0 0 0 0 0 14 1 1515.8331 Q99661 Q99661 511 524 KIF2C Kinesin-like protein KIF2C yes yes 2 0.0029003 87.363 By matching By MS/MS 1 1 10097000 5997900 4099200 3867 2730 4381 9825;9826 9637 9637 1084 5669 1 MEGPLSVFGDRSTGETIRSQNGMPK ________________ RSQNGMPKRIVNAKIA - M E P K R 0 2 1 1 0 1 2 4 0 1 1 1 2 1 2 3 2 0 0 1 0 0 25 2 2693.2901 F5GZ03 F5GZ03 1 25 TCP1 T-complex protein 1 subunit alpha yes yes 4 0.015545 43.497 By MS/MS By matching 1 1 22206000 13640000 8566700 3868 951 4382 9827;9828 9638 9638 352 1787;1788 1 MEISAELPQTPQR EEAGGTERMEISAELP ELPQTPQRLASGLCN_ R M E Q R L 1 1 0 0 0 2 2 0 0 1 1 0 1 0 2 1 1 0 0 0 0 0 13 0 1498.745 H3BS20;H3BNQ6;A0A087WTJ9;Q8IWV7 H3BS20 12 24 UBR1 E3 ubiquitin-protein ligase UBR1 yes no 2 0.0016628 113.72 By matching By MS/MS 1 1 8694900 4696000 3998900 3869 35 4383 9829;9830 9639 9639 6839 1 MEITIRNSPYR EGELRDHRMEITIRNS TIRNSPYRREDSMEDR R M E Y R R 0 2 1 0 0 0 1 0 0 2 0 0 1 0 1 1 1 0 1 0 0 0 11 1 1378.7027 J3QR29;A0A0D9SEI3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;P21127;A0A087WYI9;A0A087X1I0 J3QR29 24 34 CDK11B;CDC2L1 Cyclin-dependent kinase 11B yes no 3 0.023606 52.278 By MS/MS By matching 1 1 7830900 4207600 3623300 3870 333 4384 9831;9832 9640 9640 132 589 0 MEKAPIDTSDVEEK NQRITAFKMEKAPIDT DTSDVEEKAEEIIAEA K M E E K A 1 0 0 2 0 0 3 0 0 1 0 2 1 0 1 1 1 0 0 1 0 0 14 1 1590.7447 D6RIY6;Q06265 D6RIY6 282 295 EXOSC9 Exosome complex component RRP45 yes no 3 0.012398 62.525 By MS/MS 1 3276900 3276900 0 3871 768 4385 9833 9641 9641 1377 0 MENGVLGNALEGVHVEEEEGEKTEDESLVENNDNIDEEAR KSLLELARMENGVLGN DNIDEEAREELREQVY R M E A R E 2 1 5 3 0 0 12 4 1 1 3 1 1 0 0 1 1 0 0 4 0 0 40 1 4440.9623 P49321;E9PNB5;E9PPR5 P49321 101 140 NASP Nuclear autoantigenic sperm protein yes no 4 0.00074748 61.082 By MS/MS By matching 1 1 106650000 52217000 54431000 3872 1851 4386 9834;9835 9642 9642 90 717 7464 1 MEQALTGEAQSR ________________ LTGEAQSRWPRRGGSG - M E S R W 2 1 0 0 0 2 2 1 0 0 1 0 1 0 0 1 1 0 0 0 0 0 12 0 1319.614 Q75WM6 Q75WM6 1 12 H1FNT Testis-specific H1 histone yes yes 1 0.030304 42.809 By MS/MS 1 8073800 0 8073800 3873 2361 4387 9836 9643 9643 950 0 MEREDSSEEEEEEIDDEEIER EVEGDAWRMEREDSSE IDDEEIERRRGMMRQR R M E E R R 0 2 0 3 0 0 11 0 0 2 0 0 1 0 0 2 0 0 0 0 0 0 21 1 2626.0348 P55081 P55081 127 147 MFAP1 Microfibrillar-associated protein 1 yes yes 3 0.015025 65.184 By MS/MS 1 0 0 0 3874 1909 4388 9837 9644 9644 741 3688;3689 1 MESEGGADDSAEEGDLLDDDDNEDR KKDETNVKMESEGGAD DDDDNEDRGDDQLELI K M E D R G 2 1 1 8 0 0 5 3 0 0 2 0 1 0 0 2 0 0 0 0 0 0 25 0 2697.9944 G3V2Q1;P07910;G3V5V7;G3V4C1;B2R5W2;G3V2D6;G3V4W0;B4DY08 G3V4C1 250 274 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 no no 2;3 7.8341E-35 149.3 By MS/MS By MS/MS 6 4 0 0 0 3875 1069;1079 4389;4390;4391;4392 9838;9839;9840;9841;9842;9843;9844;9845;9846;9847 9645;9646;9647;9648;9649;9650;9651;9652;9653;9654 9647 384 2022;2023 10 MESEGGADDSAEEGDLLDDDDNEDRGDDQLELIK KKDETNVKMESEGGAD DDQLELIKDDEKEAEE K M E I K D 2 1 1 10 0 1 6 4 0 1 4 1 1 0 0 2 0 0 0 0 0 0 34 1 3709.5181 G3V2Q1;P07910;G3V5V7;G3V4C1;B2R5W2;G3V2D6 G3V4C1 250 283 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 no no 3 0.021614 52.96 By MS/MS 1 0 0 0 3876 1069;1079 4393 9848 9655 9655 2022;2023 1 MESHSEDEDLAGAVGGLGWNSR GSLPLTPRMESHSEDE GGLGWNSRSPRTQSPG R M E S R S 2 1 1 2 0 0 3 4 1 0 2 0 1 0 0 3 0 1 0 1 0 0 22 0 2316.0077 K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4;K7ESM2 K7ELS4 49 70 HEXIM2 Protein HEXIM2 yes no 3 0.030673 44.641 By MS/MS 1 0 0 0 3877 1368 4394 9849 9656 9656 476 1 MESSFGSPSKQESSESLPK TNPDLEEKMESSFGSP ESSESLPKEAFLVLSD K M E P K E 0 0 0 0 0 1 3 1 0 0 1 2 1 1 2 7 0 0 0 0 0 0 19 1 2040.931 Q6VMQ6;A8MV73 Q6VMQ6 471 489 ATF7IP Activating transcription factor 7-interacting protein 1 yes no 3 0.0081953 60.062 By MS/MS By MS/MS 1 2 35058000 15086000 19972000 3878 2341 4395;4396 9850;9851;9852 9657;9658 9657 939 4729;4730 2 MESTAGITTTTSPR PQSASSPRMESTAGIT ITTTTSPRTPPPLTVQ R M E P R T 1 1 0 0 0 0 1 1 0 1 0 0 1 0 1 2 5 0 0 0 0 0 14 0 1451.6926 Q8TDY2 Q8TDY2 656 669 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 2 0.00043338 91.076 By MS/MS By MS/MS 1 1 10614000 5879800 4734700 3879 2541 4397 9853;9854 9659;9660 9659 1018 5187;7743;7744;7745 2 METEADAPSPAPSLGER KNSRIGEKMETEADAP PAPSLGERLEPRKIPL K M E E R L 3 1 0 1 0 0 3 1 0 0 1 0 1 0 3 2 1 0 0 0 0 0 17 0 1756.7938 Q12873 Q12873 1593 1609 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 2 0.00028895 99.844 By matching By MS/MS 1 2 13836000 3086600 10749000 3880 2030 4398;4399 9855;9856;9857 9661;9662 9661 3948;3949 2 METGRQTGVSAEMFAMPR ________________ AEMFAMPRDLKGSKKD - M E P R D 2 2 0 0 0 1 2 2 0 0 0 0 3 1 1 1 2 0 0 1 0 0 18 1 1997.9121 A6NLC8 A6NLC8 1 18 Putative TAF11-like protein ENSP00000332601 yes yes 2 0.029423 52.79 By MS/MS 1 0 0 0 3881 478 4400 9858 9663 9663 183;184 1 METTFYDDALNASFLPSESGPYGYSNPKILK ________________ YSNPKILKQSMTLNLA K M E L K Q 2 0 2 2 0 0 2 2 0 1 3 2 1 2 3 4 2 0 3 0 0 0 31 1 3454.6279 P05412 P05412 5 35 JUN Transcription factor AP-1 yes yes 3 0.011796 42.321 By matching By MS/MS 1 1 23413000 10917000 12496000 3882 1642 4401 9859;9860 9664 9664 597 7368;7369;8217 1 METVSNASSSSNPSSPGR QSQTKSSRMETVSNAS SNPSSPGRIKGRLDSS R M E G R I 1 1 2 0 0 0 1 1 0 0 0 0 1 0 2 7 1 0 0 1 0 0 18 0 1793.785 Q9NTI5;A9IYQ1 Q9NTI5 1152 1169 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 1.5327E-78 204.07 By MS/MS By MS/MS 2 2 148450000 79834000 68619000 3883 2918 4402;4403 9861;9862;9863;9864 9665;9666;9667;9668 9667 1158 6164;6165;6166 4 MEVGPFSTGQESPTAENAR EDDEEEDRMEVGPFST SPTAENARLLAQKRGA R M E A R L 2 1 1 0 0 1 3 2 0 0 0 0 1 1 2 2 2 0 0 1 0 0 19 0 2006.9004 Q9Y4W2 Q9Y4W2 606 624 LAS1L Ribosomal biogenesis protein LAS1L yes yes 2;3 3.815E-33 167.63 By MS/MS By MS/MS 4 4 108970000 56228000 52739000 3884 3123 4404;4405 9865;9866;9867;9868;9869;9870;9871;9872 9669;9670;9671;9672;9673;9674;9675;9676;9677 9670 1242 6693;7954 9 MFAVVFFILSLMTCQPGVTAQEKVNQRVR ________________ EKVNQRVRRAATPAAV - M F V R R 2 2 1 0 1 3 1 1 0 1 2 1 2 3 1 1 2 0 0 5 0 0 29 2 3368.756 P07357 P07357 1 29 C8A Complement component C8 alpha chain yes yes 3 0.010276 58.627 By MS/MS 1 0 0 0 3885 1652 4406 9873 9678 9678 3115;7376;7377 1 MFSKEPQKSEEVLK DSYTNVYRMFSKEPQK QKSEEVLKNCEIVNWK R M F L K N 0 0 0 0 0 1 3 0 0 0 1 3 1 1 1 2 0 0 0 1 0 0 14 2 1678.86 E9PP99;Q969I3 E9PP99 100 113 GLYATL1 Glycine N-acyltransferase-like protein 1 yes no 2 0.0014791 82.831 By MS/MS 1 16180000 0 16180000 3886 920 4407 9874 9679 9679 153 346 1712 1 MFSPMEEK EDSFFRQRMFSPMEEK MFSPMEEKELLSPLSE R M F E K E 0 0 0 0 0 0 2 0 0 0 0 1 2 1 1 1 0 0 0 0 0 0 8 0 997.42489 Q9UHB7 Q9UHB7 692 699 AFF4 AF4/FMR2 family member 4 yes yes 2 0.0039591 135.43 By MS/MS By MS/MS 4 3 58802000 27602000 31200000 3887 3004 4408;4409 9875;9876;9877;9878;9879;9880;9881 9680;9681;9682;9683;9684;9685;9686;9687;9688 9682 1195;1196 6330 8 MFVLDEADEMLSR YLSPKYIKMFVLDEAD EADEMLSRGFKDQIYD K M F S R G 1 1 0 2 0 0 2 0 0 0 2 0 2 1 0 1 0 0 0 1 0 0 13 0 1554.7058 P60842;J3QR64;J3KTB5;J3QL43;J3QS69;J3KT12;E7EQG2;Q14240;J3KTN0;J3QLN6;J3KSZ0 P60842 178 190 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.00055778 97.911 By MS/MS By MS/MS 3 3 38878000 21088000 17791000 3888 1929 4410;4411 9882;9883;9884;9885;9886;9887 9689;9690;9691;9692;9693;9694 9690 756;757 6 MFVSSSGLPPSPVPSPR SPTRGFGKMFVSSSGL PSPVPSPRRFSRRSQS K M F P R R 0 1 0 0 0 0 0 1 0 0 1 0 1 1 5 5 0 0 0 2 0 0 17 0 1740.8869 Q7Z309;G1UD79 Q7Z309 127 143 FAM122B;SPACIA2 Protein FAM122B yes no 2 7.6229E-05 102.33 By MS/MS By MS/MS 4 3 44260000 22812000 21448000 3889 2374 4412 9888;9889;9890;9891;9892;9893;9894 9695;9696;9697;9698;9699;9700;9701;9702;9703;9704 9696 958 4821;4822 10 MGAPESGLAEYLFDKHTLGDSDNES DHVTNLRKMGAPESGL LGDSDNES________ K M G E S - 2 0 1 3 0 0 3 3 1 0 3 1 1 1 1 3 1 0 1 0 0 0 25 1 2682.1755 G3V1D1;G3V192;P02794 G3V1D1 89 113 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes no 3 1.678E-06 89.631 By matching By MS/MS 1 2 347540000 108130000 239410000 3890 1060 4413;4414 9895;9896;9897 9705;9706 9705 380 2005;2006 2 MGDMGDPPK ________________ GDMGDPPKKKRLISLC - M G P K K 0 0 0 2 0 0 0 2 0 0 0 1 2 0 2 0 0 0 0 0 0 0 9 0 946.38884 D6RBJ1;P61371 D6RBJ1 1 9 ISL1 Insulin gene enhancer protein ISL-1 yes no 1 0.02529 46.994 By MS/MS 1 2943200 2943200 0 3891 752 4415 9898 9707 9707 287 0 MGESDDSILR AICGAIRRMGESDDSI ESDDSILRLAKADGIV R M G L R L 0 1 0 2 0 0 1 1 0 1 1 0 1 0 0 2 0 0 0 0 0 0 10 0 1121.5023 Q8WVC2;P63220 Q8WVC2 62 71 RPS21 40S ribosomal protein S21 yes no 2 0.028789 72.607 By matching By MS/MS 1 1 10215000 4829200 5386000 3892 1953 4416 9899;9900 9708 9708 767 1 MGHAGAIIAGGK LTAPPGRRMGHAGAII GAIIAGGKGGAKEKIS R M G G K G 3 0 0 0 0 0 0 4 1 2 0 1 1 0 0 0 0 0 0 0 0 0 12 0 1081.5702 P53597 P53597 297 308 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 3 0.023986 50.791 By MS/MS By MS/MS 2 1 5553000 3619900 1933100 3893 1896 4417;4418 9901;9902;9903 9709;9710;9711;9712 9711 739 4 MGIKVLQQSK ________________ IKVLQQSKSQKQKEEA - M G S K S 0 0 0 0 0 2 0 1 0 1 1 2 1 0 0 1 0 0 0 1 0 0 10 1 1130.6482 C9JNX3;F8WE69;Q5TEA6 C9JNX3 1 10 SEL1L2 Protein sel-1 homolog 2 yes no 2 0.012486 68.847 By MS/MS By MS/MS 1 1 36798000 23704000 13094000 3894 680 4419 9904;9905 9713;9714 9714 266 1256 2 MGKTNSKLAPEVLEDLVQNTEFSEQELK ________________ EFSEQELKQWYKGFLK - M G L K Q 1 0 2 1 0 2 5 1 0 0 4 3 1 1 1 2 2 0 0 2 0 0 28 2 3176.5911 B4DGW9;Q9UM19 B4DGW9 1 28 HPCAL4 Hippocalcin-like protein 4 yes no 3 0.014144 41.763 By MS/MS 1 27749000 0 27749000 3895 551 4420 9906 9715 9715 219 1026;6991 1 MGLAMGGGGGASFDR ALGAGIERMGLAMGGG GGGASFDRAIEMERGN R M G D R A 2 1 0 1 0 0 0 6 0 0 1 0 2 1 0 1 0 0 0 0 0 0 15 0 1382.6071 A0A087X0X3;P52272;M0R2I7;M0QY96 A0A087X0X3 607 621 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.00026628 97.45 By MS/MS By MS/MS 1 1 23618000 11036000 12581000 3896 163 4421 9907;9908 9716;9717 9717 63;64 266 2 MGLLSPSGIGGVSPR PRALPPGRMGLLSPSG GIGGVSPRHALTSPSL R M G P R H 0 1 0 0 0 0 0 4 0 1 2 0 1 0 2 3 0 0 0 1 0 0 15 0 1426.7602 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 588 602 SAMD4B Protein Smaug homolog 2 yes no 2 0.00017149 100.18 By MS/MS By MS/MS 2 2 30041000 17511000 12530000 3897 1411 4422;4423 9909;9910;9911;9912 9718;9719;9720 9718 491 2587 3 MGLSFSLFPLR ________________ SFSLFPLRNHVNVEGA - M G L R N 0 1 0 0 0 0 0 1 0 0 3 0 1 2 1 2 0 0 0 0 0 0 11 0 1266.6795 A0A0C4DFU6 A0A0C4DFU6 1 11 SNX27 yes yes 3 0.029113 42.743 By matching By MS/MS 1 1 77206000 39013000 38193000 3898 298 4424 9913;9914 9721 9721 117 1 MGLSMER RMGPAIERMGLSMERM RMGLSMERMVPAGMGA R M G E R M 0 1 0 0 0 0 1 1 0 0 1 0 2 0 0 1 0 0 0 0 0 0 7 0 822.37279 A0A087X0X3;P52272;M0R2I7;M0QZM1 A0A087X0X3 525 531 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.020074 58.433 By MS/MS By MS/MS 1 1 14968000 7593600 7374200 3899 163 4425 9915;9916 9722;9723 9723 65;66 267 0 MGLVMDR RVGSEIERMGLVMDRM RMGLVMDRMGSVERMG R M G D R M 0 1 0 1 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 1 0 0 7 0 820.39353 A0A087X0X3;P52272;M0QZM1 A0A087X0X3 437 443 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.019207 64.757 By MS/MS 1 0 0 0 3900 163 4426 9917 9724 9724 67 1 MGNLQNSPVNMNPPPLSK SLASPDLKMGNLQNSP MNPPPLSKMGSLDSKD K M G S K M 0 0 4 0 0 1 0 1 0 0 2 1 2 0 4 2 0 0 0 1 0 0 18 0 1936.9499 E7EWM1;Q15596 E7EWM1 559 576 NCOA2 Nuclear receptor coactivator 2 yes no 2 0.0056213 70.942 By MS/MS By MS/MS 2 2 14246000 11083000 3162800 3901 835 4427;4428 9918;9919;9920;9921 9725;9726;9727 9727 317;318 1560 3 MGQAPSQSLLPPAQDQPRSPVPSAFSDQSR RAPSPSSRMGQAPSQS SAFSDQSRCLIAQTTP R M G S R C 3 2 0 2 0 5 0 1 0 0 2 0 1 1 6 6 0 0 0 1 0 0 30 1 3178.5466 Q9UQ35;I3L3Q8 Q9UQ35 2431 2460 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3;4 5.6793E-10 89.08 By MS/MS By MS/MS 3 2 1021000000 482310000 538710000 3902 3074 4429;4430 9922;9923;9924;9925;9926 9728;9729;9730;9731;9732;9733;9734;9735;9736;9737 9729 1227 6532;6533;6534 10 MGSDEFDISPR EAQKRKKKMGSDEFDI DEFDISPRISKQQEGS K M G P R I 0 1 0 2 0 0 1 1 0 1 0 0 1 1 1 2 0 0 0 0 0 0 11 0 1252.5394 Q8IWI9 Q8IWI9 2494 2504 MGA MAX gene-associated protein yes yes 2 0.00045456 102.9 By MS/MS By MS/MS 1 1 7353100 3441900 3911300 3903 2429 4431 9927;9928 9738;9739 9738 983 4964 2 MGSGIQYGDAALR SGELDPERMGSGIQYG QYGDAALRQLRSPRRA R M G L R Q 2 1 0 1 0 1 0 3 0 1 1 0 1 0 0 1 0 0 1 0 0 0 13 0 1337.6398 A0A087WYT5;P20338 A0A087WYT5 83 95 RAB4A Ras-related protein Rab-4A yes no 2 0.010431 60.691 By matching By MS/MS 1 1 8006300 5204000 2802300 3904 129 4432 9929;9930 9740 9740 48 7991 1 MGSKSPGNTSQPPAFFSK GEQTEPSRMGSKSPGN QPPAFFSKLTESNSAM R M G S K L 1 0 1 0 0 1 0 2 0 0 0 2 1 2 3 4 1 0 0 0 0 0 18 1 1866.8934 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7;H7C184 C9JE98 2244 2261 NCOR2 Nuclear receptor corepressor 2 yes no 2;3 0.0091335 61.821 By MS/MS By MS/MS 2 2 23137000 10694000 12443000 3905 625 4433 9931;9932;9933;9934 9741;9742 9742 243 1170 2 MHIEKDETPLSTPTAR DMGHESKRMHIEKDET PLSTPTARDSLDKLSL R M H A R D 1 1 0 1 0 0 2 0 1 1 1 1 1 0 2 1 3 0 0 0 0 0 16 1 1824.904 A0A087WZP2;Q9UI36 A0A087WZP2 571 586 DACH1 Dachshund homolog 1 yes no 3 0.0041657 75.319 By MS/MS By MS/MS 2 1 17301000 7360800 9940000 3906 143 4434;4435 9935;9936;9937 9743;9744 9744 53 234;6862;6863 2 MIFEGPNKLSPR VARDGPTKMIFEGPNK GPNKLSPRIDGPPTPA K M I P R I 0 1 1 0 0 0 1 1 0 1 1 1 1 1 2 1 0 0 0 0 0 0 12 1 1387.7282 O94913;E9PKN0;E9PQ01 O94913 768 779 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 2 0.014993 72.705 By MS/MS By MS/MS 1 1 12984000 7096100 5887900 3907 1576 4436 9938;9939 9745;9746 9746 570 2985 2 MILELFSKVPSLVGSFIRSQNK PYEKACQKMILELFSK SFIRSQNKEDYAGLKE K M I N K E 0 1 1 0 0 1 1 1 0 2 3 2 1 2 1 4 0 0 0 2 0 0 22 2 2492.3825 Q5TA02;P78417 Q5TA02 87 108 GSTO1 Glutathione S-transferase omega-1 yes no 3 0.025767 49.141 By matching By MS/MS 1 1 23834000 10306000 13528000 3908 1963 4437 9940;9941 9747 9747 3749;3750;3751 1 MILLNNSER ________________ ILLNNSERLLALFKSL - M I E R L 0 1 2 0 0 0 1 0 0 1 2 0 1 0 0 1 0 0 0 0 0 0 9 0 1088.5648 A0A0U1RQE8 A0A0U1RQE8 1 9 yes yes 2 0.010625 58.37 By MS/MS 1 3588500 3588500 0 3909 380 4438 9942 9748 9748 150 700 1 MINLSVPDTIDER GDGIVLCKMINLSVPD VPDTIDERAINKKKLT K M I E R A 0 1 1 2 0 0 1 0 0 2 1 0 1 0 1 1 1 0 0 1 0 0 13 0 1501.7446 P13796;Q5TBN3;U3KQI3;A0A0A0MSQ0;P13797 A0A0A0MSQ0 147 159 LCP1;PLS3 Plastin-2;Plastin-3 no no 2 0.0026602 93.258 By MS/MS By MS/MS 2 2 10375000 5551300 4823700 3910 255;1695 4439;4440 9943;9944;9945;9946 9749;9750;9751 9750 105 3 MISDAIPELK KVSSFEEKMISDAIPE SDAIPELKASIKKGED K M I L K A 1 0 0 1 0 0 1 0 0 2 1 1 1 0 1 1 0 0 0 0 0 0 10 0 1115.5896 G3XAL0;P40926 G3XAL0 208 217 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 2 0.0082284 95.358 By MS/MS 1 2146600 0 2146600 3911 1091 4441 9947 9752 9752 391 1 MISEGFLTSSPSGLR ________________ TSSPSGLRTRLFLSFL - M I L R T 0 1 0 0 0 0 1 2 0 1 2 0 1 1 1 4 1 0 0 0 0 0 15 0 1580.7868 Q8WY65 Q8WY65 1 15 hCG_2019237 yes yes 2 0.023998 55.885 By MS/MS 1 0 0 0 3912 2574 4442 9948 9753 9753 5272;5273;5274 1 MISTPSPK MDYDLELKMISTPSPK MISTPSPKKSMKMTMY K M I P K K 0 0 0 0 0 0 0 0 0 1 0 1 1 0 2 2 1 0 0 0 0 0 8 0 859.44734 Q53F19 Q53F19 410 417 C17orf85 Uncharacterized protein C17orf85 yes yes 1;2 0.0075066 86.882 By MS/MS By MS/MS 3 3 53488000 26510000 26978000 3913 2203 4443;4444 9949;9950;9951;9952;9953;9954 9754;9755;9756;9757;9758;9759 9756 883 4412;4413 6 MKKYGSLVPLSEK ________________ SLVPLSEKEVLGRLKD - M K E K E 0 0 0 0 0 0 1 1 0 0 2 3 1 0 1 2 0 0 1 1 0 0 13 2 1478.8167 C9JHT8 C9JHT8 1 13 SENP5 yes yes 2 0.0038989 64.841 By MS/MS By matching 1 1 14175000 8073500 6101500 3914 666 4445 9955;9956 9760 9760 261 1234;8091 1 MKSLEQDALR RALWRAARMKSLEQDA SLEQDALRAQMVLSRS R M K L R A 1 1 0 1 0 1 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 10 1 1189.6125 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YCG0 A0A0G2JNZ2 1506 1515 SCRIB Protein scribble homolog yes no 2 0.0025546 109.95 By MS/MS By MS/MS 1 1 80121000 29510000 50611000 3915 361 4446 9957;9958 9761;9762 9762 657 2 MKTGRSALVVTDTGDMSVLNSPR PGREKLKKMKTGRSAL MSVLNSPRHQSCIMHV K M K P R H 1 2 1 2 0 0 0 2 0 0 2 1 2 0 1 3 3 0 0 3 0 0 23 2 2434.2308 C9JPS2;Q9UBZ9 C9JPS2 30 52 REV1 DNA repair protein REV1 yes no 3 0.028923 47.499 By MS/MS 1 0 0 0 3916 684 4447 9959 9763 9763 267 1 MLAESDESGDEESVSQTDK LAKAKAVKMLAESDES ESVSQTDKTELQNTLR K M L D K T 1 0 0 3 0 1 4 1 0 0 1 1 1 0 0 4 1 0 0 1 0 0 19 0 2055.8426 P22059 P22059 186 204 OSBP Oxysterol-binding protein 1 yes yes 2 1.1705E-12 132.62 By MS/MS By MS/MS 1 1 0 0 0 3917 1746 4448;4449 9960;9961 9764;9765 9764 654 3285;3286 2 MLAESDESGDEESVSQTDKTELQNTLR LAKAKAVKMLAESDES TELQNTLRTLSSKVED K M L L R T 1 1 1 3 0 2 5 1 0 0 3 1 1 0 0 4 3 0 0 1 0 0 27 1 3011.3513 P22059 P22059 186 212 OSBP Oxysterol-binding protein 1 yes yes 3 1.9787E-07 93.407 By MS/MS By MS/MS 2 1 185820000 109280000 76549000 3918 1746 4450;4451 9962;9963;9964 9766;9767;9768 9767 654 3285;3286 3 MLAGDGMSQVTK EHLAKGQRMLAGDGMS DGMSQVTKTLLDLTQR R M L T K T 1 0 0 1 0 1 0 2 0 0 1 1 2 0 0 1 1 0 0 1 0 0 12 0 1236.5842 O60242 O60242 589 600 BAI3 Brain-specific angiogenesis inhibitor 3 yes yes 1 0.014065 59.153 By MS/MS 1 5791600 5791600 0 3919 1512 4452 9965 9769 9769 548 7321 0 MLDQTLLDLNEM EEHLCTQRMLDQTLLD TLLDLNEM________ R M L E M - 0 0 1 2 0 1 1 0 0 0 4 0 2 0 0 0 1 0 0 0 0 0 12 0 1434.6735 A0A087WWU8;Q5HYB6;J3KN67;Q5VU61 A0A087WWU8 216 227 TPM3;DKFZp686J1372 yes no 2 1.4586E-35 188.91 By MS/MS By MS/MS 1 1 36544000 22390000 14154000 + 3920 99 4453 9966;9967 9770;9771 9770 36;37 2 MLGAPDESSVR ________________ APDESSVRVAVRIRPQ - M L V R V 1 1 0 1 0 0 1 1 0 0 1 0 1 0 1 2 0 0 0 1 0 0 11 0 1160.5496 Q7Z4S6 Q7Z4S6 1 11 KIF21A Kinesin-like protein KIF21A yes yes 2 0.01344 52.693 By MS/MS By matching 1 1 19370000 10080000 9290200 3921 2386 4454 9968;9969 9772 9772 962 4850;4851 1 MLGQKATPPPSPLLSELLK TDDSPQKKMLGQKATP PLLSELLKKGSLLPTS K M L L K K 1 0 0 0 0 1 1 1 0 0 5 2 1 0 4 2 1 0 0 0 0 0 19 1 2019.1438 H7C128;H7C179;H7C127 H7C128 249 267 BRD8 yes no 3 0.00017174 110.91 By MS/MS By MS/MS 1 1 18804000 9529500 9274900 3922 1273 4455 9970;9971 9773;9774 9773 458 2358;2359;7230 2 MLGQKATPPPSPLLSELLKK TDDSPQKKMLGQKATP LLSELLKKGSLLPTSP K M L K K G 1 0 0 0 0 1 1 1 0 0 5 3 1 0 4 2 1 0 0 0 0 0 20 2 2147.2388 H7C128;H7C179;H7C127 H7C128 249 268 BRD8 yes no 3 0.0024721 69.084 By MS/MS By MS/MS 1 1 17094000 8923000 8170900 3923 1273 4456 9972;9973 9775;9776;9777 9775 458 2358;2359;7230 3 MLISAVSPEIR WTPTANLKMLISAVSP SAVSPEIRNRDQKRGL K M L I R N 1 1 0 0 0 0 1 0 0 2 1 0 1 0 1 2 0 0 0 1 0 0 11 0 1214.6693 E9PMT9;A0AVK6 E9PMT9 65 75 E2F8 Transcription factor E2F8 yes no 2 0.010417 73.877 By MS/MS 1 2756000 2756000 0 3924 438 4457 9974 9778 9778 819 1 MLLSPGGVSQPLTASLAR GRRSQMLRMLLSPGGV PLTASLARQRIVEEER R M L A R Q 2 1 0 0 0 1 0 2 0 0 4 0 1 0 2 3 1 0 0 1 0 0 18 0 1796.9819 I3L0U5;Q6PK04 I3L0U5 239 256 CCDC137 Coiled-coil domain-containing protein 137 yes no 2 0.00031838 107.53 By MS/MS By MS/MS 1 1 5540300 5540300 0 3925 1301 4458 9975;9976 9779;9780 9780 467 2416 2 MLMPQDIMAYRGR REEFLNSRMLMPQDIM DIMAYRGREVVENNLP R M L G R E 1 2 0 1 0 1 0 1 0 1 1 0 3 0 1 0 0 0 1 0 0 0 13 1 1580.7626 P41182 P41182 148 160 BCL6 B-cell lymphoma 6 protein yes yes 3 0.028548 56.205 By MS/MS 1 0 0 0 3926 1816 4459 9977 9781 9781 688 1 MLNSSFEDDPFFSESILAHR ________________ SESILAHRENMRQMIR R M L H R E 1 1 1 2 0 0 2 0 1 1 2 0 1 3 1 4 0 0 0 0 0 0 20 0 2341.0685 C9J3M3;P58340 C9J3M3 4 23 MLF1 Myeloid leukemia factor 1 yes no 3 1.6031E-57 184.15 By MS/MS 1 9243400 0 9243400 3927 632 4460 9978 9782 9782 248 1182 1 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR QRLFENLRMLPHAPGV DEDDPDKRISICSSDK R M L K R I 3 1 0 6 0 2 5 2 1 2 1 1 2 0 5 1 0 0 0 1 0 0 33 1 3630.609 Q13547 Q13547 372 404 HDAC1 Histone deacetylase 1 yes yes 3;4 7.76E-15 99.753 By MS/MS By MS/MS 8 8 3492500000 1718000000 1774500000 3928 2066 4461;4462;4463 9979;9980;9981;9982;9983;9984;9985;9986;9987;9988;9989;9990;9991;9992;9993;9994 9783;9784;9785;9786;9787;9788;9789;9790;9791;9792;9793;9794;9795;9796;9797;9798;9799;9800;9801;9802;9803 9787 825;826 4080 21 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR QRLFENLRMLPHAPGV DGEDPDKRISIRASDK R M L K R I 3 1 0 6 0 2 4 3 2 1 1 1 2 0 4 1 0 0 0 2 0 0 33 1 3584.5784 Q92769 Q92769 373 405 HDAC2 Histone deacetylase 2 yes yes 3;4;5 1.3059E-06 76.31 By MS/MS By MS/MS 6 6 1446000000 731410000 714550000 3929 2600 4464;4465;4466 9995;9996;9997;9998;9999;10000;10001;10002;10003;10004;10005;10006 9804;9805;9806;9807;9808;9809;9810;9811;9812;9813;9814;9815 9812 1039;1040 5340 12 MLQAISPKQSPSSSPTR MLKEGKGRMLQAISPK SPSSSPTRERSPSPSF R M L T R E 1 1 0 0 0 2 0 0 0 1 1 1 1 0 3 5 1 0 0 0 0 0 17 1 1813.9356 P49585;C9JEJ2 P49585 310 326 PCYT1A Choline-phosphate cytidylyltransferase A yes no 2 0.00010887 96.379 By MS/MS By MS/MS 2 1 36664000 23705000 12959000 3930 1856 4467;4468 10007;10008;10009 9816;9817;9818 9816 719 3572;3573;3574 2 MLQWLATKSPK RASGSSQRMLQWLATK WLATKSPKKEDSKTPQ R M L P K K 1 0 0 0 0 1 0 0 0 0 2 2 1 0 1 1 1 1 0 0 0 0 11 1 1301.7166 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 239 249 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein yes no 2;3 0.0039601 89.747 By MS/MS By matching 2 1 16840000 10460000 6380500 3931 732 4469;4470 10010;10011;10012 9819;9820 9819 280 1331 2 MLRASLTQATSR PPNLTTKKMLRASLTQ SLTQATSRKPACAQSL K M L S R K 2 2 0 0 0 1 0 0 0 0 2 0 1 0 0 2 2 0 0 0 0 0 12 1 1333.7136 Q68DL7 Q68DL7 340 351 C18orf63 Uncharacterized protein C18orf63 no no 1 NaN 0 0 0 3932 2294 0 MLSAHTGHLLHPEYLQPLSSTPVSPIELDAK RLPIRVLKMLSAHTGH SPIELDAKKSPLALLA K M L A K K 2 0 0 1 0 1 2 1 3 1 6 1 1 0 4 4 2 0 1 1 0 0 31 0 3380.7439 Q9H7S9 Q9H7S9 55 85 ZNF703 Zinc finger protein 703 yes yes 4 0.0001537 60.951 By MS/MS By matching 2 1 40082000 31661000 8420500 3933 2851 4471;4472 10013;10014;10015 9821;9822 9821 1132 6004 2 MLSFQGLAELAHR ________________ GLAELAHREYQAGDFE - M L H R E 2 1 0 0 0 1 1 1 1 0 3 0 1 1 0 1 0 0 0 0 0 0 13 0 1471.7606 C9JZL3;O15294 C9JZL3 1 13 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 2;3 7.148E-12 146.1 By MS/MS By MS/MS 2 2 31711000 19033000 12678000 3934 705 4473 10016;10017;10018;10019 9823;9824;9825;9826;9827 9826 271 1301 5 MLSGGSDGVIVLYDLENSSR ________________ YDLENSSRQSYYTCKA - M L S R Q 0 1 1 2 0 0 1 3 0 1 3 0 1 0 0 4 0 0 1 2 0 0 20 0 2111.0205 C9JNT2 C9JNT2 1 20 ERCC8 yes yes 2 0.030184 44.641 By MS/MS 1 0 0 0 3935 678 4474 10020 9828 9828 264 1 MLSQDAPTVK SKMEQKFRMLSQDAPT SQDAPTVKESCKTSSN R M L V K E 1 0 0 1 0 1 0 0 0 0 1 1 1 0 1 1 1 0 0 1 0 0 10 0 1088.5536 A0A0C4DG07;O60934 A0A0C4DG07 313 322 NBN Nibrin yes no 2 0.0053633 68.515 By MS/MS By MS/MS 2 2 62949000 36723000 26226000 3936 304 4475;4476 10021;10022;10023;10024 9829;9830;9831 9829 119 532 3 MLSRWSASFTVTKGK ________________ SFTVTKGKSSTQEATG - M L G K S 1 1 0 0 0 0 0 1 0 0 1 2 1 1 0 3 2 1 0 1 0 0 15 2 1697.8923 G3V4C4 G3V4C4 1 15 COCH yes yes 2 0.030368 50.831 By MS/MS 1 0 0 0 3937 1080 4477 10025 9832 9832 390 1 MLSSSDAITQEFMDLR KSPGKRRRMLSSSDAI TQEFMDLRTRYTALVT R M L L R T 1 1 0 2 0 1 1 0 0 1 2 0 2 1 0 3 1 0 0 0 0 0 16 0 1842.8492 H0Y390;H3BPE1;H3BQK9;Q9UPN3;E9PLY5;E9PNZ4 H0Y390 508 523 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 6.6315E-05 112.82 By MS/MS By MS/MS 1 1 7242700 4573700 2669100 3938 1115 4478 10026;10027 9833;9834 9833 403 2108 2 MLWGSDPYPHAEPQQATTPK AISLSEPRMLWGSDPY PQQATTPKATEEPEDV R M L P K A 2 0 0 1 0 2 1 1 1 0 1 1 1 0 4 1 2 1 1 0 0 0 20 0 2253.0525 E7EPN9;Q9Y520 E7EPN9 807 826 PRRC2C Protein PRRC2C yes no 2;3 0.00025357 80.545 By MS/MS By MS/MS 3 2 79925000 45516000 34409000 3939 802 4479;4480 10028;10029;10030;10031;10032 9835;9836;9837;9838 9835 298 7073;7074 4 MLYYGEEHELSPKEISEK KIQEINNKMLYYGEEH SPKEISEKLVLAQKML K M L E K L 0 0 0 0 0 0 5 1 1 1 2 2 1 0 1 2 0 0 2 0 0 0 18 1 2181.03 A0A0A0MTC7;A0A0A0MQS9;Q16363 A0A0A0MTC7 395 412 LAMA4 Laminin subunit alpha-4 yes no 3 0.031897 40.237 By MS/MS 1 0 0 0 3940 189 4481 10033 9839 9839 81 1 MMAPQEAVPAEPSPK EHQELHLKMMAPQEAV VPAEPSPKAPPLSSST K M M P K A 3 0 0 0 0 1 2 0 0 0 0 1 2 0 4 1 0 0 0 1 0 0 15 0 1581.7531 A0A0C4DFM2;Q6ZN55;M0R133 A0A0C4DFM2 191 205 ZNF574 Zinc finger protein 574 yes no 2 0.030885 52.008 By MS/MS By matching 1 1 7319900 2699100 4620800 3941 294 4482 10034;10035 9840 9840 115;116 1 MMSTWIRWRGTSR WSWSGAQRMMSTWIRW IRWRGTSRNPSRSTCP R M M S R N 0 3 0 0 0 0 0 1 0 1 0 0 2 0 0 2 2 2 0 0 0 0 13 2 1666.8184 B5MD06;B5MC52;Q658J9 B5MD06 71 83 HDAC11;DKFZp434L0312 yes no 3 0.028754 42.149 By MS/MS 1 0 0 0 3942 575 4483 10036 9841 9841 231;232 1 MMVENIMNK VLEMFDLRMMVENIMN MVENIMNKEAFMNQEI R M M N K E 0 0 2 0 0 0 1 0 0 1 0 1 3 0 0 0 0 0 0 1 0 0 9 0 1108.5079 O94844 O94844 447 455 RHOBTB1 Rho-related BTB domain-containing protein 1 yes yes 2 0.024283 51.787 By MS/MS 1 1976400 1976400 0 3943 1571 4484 10037 9842 9842 568;569 0 MNDFHISDDEEKNPSK ________________ DEEKNPSKLLFLKTNK - M N S K L 0 0 2 3 0 0 2 0 1 1 0 2 1 1 1 2 0 0 0 0 0 0 16 1 1904.8211 A8MSM7;A2VCS9;A0A0C4DG83;E7ETZ8;Q49MG5 A8MSM7 1 16 MAP9 Microtubule-associated protein 9 yes no 3 0.0063643 68.088 By matching By MS/MS 1 1 25781000 10113000 15668000 3944 456 4485 10038;10039 9843 9843 175 851 1 MNEEISSDSESESLAPR GKSKGGGKMNEEISSD ESESLAPRKPEEEEEE K M N P R K 1 1 1 1 0 0 4 0 0 1 1 0 1 0 1 5 0 0 0 0 0 0 17 0 1879.8106 O43818 O43818 45 61 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 2 0.00032837 106.67 By MS/MS By MS/MS 3 2 7235400 3698100 3537300 3945 1510 4486;4487 10040;10041;10042;10043;10044 9844;9845;9846;9847;9848 9848 546 2839;2840;2841;2842;2843 5 MNGVMFPGNSPSYTER NNSNSLNRMNGVMFPG NSPSYTERSNINGPGT R M N E R S 0 1 2 0 0 0 1 2 0 0 0 0 2 1 2 2 1 0 1 1 0 0 16 0 1785.7814 Q9NY27 Q9NY27 150 165 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 2 3.4746E-05 118.5 By MS/MS By MS/MS 6 5 127230000 64643000 62586000 3946 2944 4488;4489;4490;4491;4492 10045;10046;10047;10048;10049;10050;10051;10052;10053;10054;10055 9849;9850;9851;9852;9853;9854;9855;9856;9857;9858 9849 137 1170;1171 6202;6203 7 MNSLTFK KGKKVFERMNSLTFKK RMNSLTFKKSKDMRAK R M N F K K 0 0 1 0 0 0 0 0 0 0 1 1 1 1 0 1 1 0 0 0 0 0 7 0 839.42112 Q96N67;A0A1B0GWE0 Q96N67 1381 1387 DOCK7 Dedicator of cytokinesis protein 7 no no 2 0.0080953 81.525 By MS/MS By MS/MS 1 1 50043000 22483000 27559000 3947 2689;433 4493 10056;10057 9859;9860 9860 168 810 2 MNSLTFKK KGKKVFERMNSLTFKK MNSLTFKKSKDMRAKL R M N K K S 0 0 1 0 0 0 0 0 0 0 1 2 1 1 0 1 1 0 0 0 0 0 8 1 967.51609 Q96N67;A0A1B0GWE0 Q96N67 1381 1388 DOCK7 Dedicator of cytokinesis protein 7 no no 2 0.015726 82.831 By MS/MS By MS/MS 2 2 92049000 49502000 42547000 3948 2689;433 4494;4495 10058;10059;10060;10061 9861;9862;9863 9862 168 810 3 MNSNNRDSSALNHSSK KPPAPPLRMNSNNRDS SALNHSSKPLPMAPEE R M N S K P 1 1 4 1 0 0 0 0 1 0 1 1 1 0 0 5 0 0 0 0 0 0 16 1 1760.786 B1AKS5;O75914 B1AKS5 18 33 PAK3 Serine/threonine-protein kinase PAK 3 yes no 2 0.013384 65.924 By MS/MS 1 0 0 0 3949 523 4496 10062 9864 9864 981;982;983;984 1 MNSQDSNTSVLEVVSEKPLSER ISSATVARMNSQDSNT SEKPLSERLKVVPGET R M N E R L 0 1 2 1 0 1 3 0 0 0 2 1 1 0 1 5 1 0 0 3 0 0 22 1 2448.1802 Q9UJA3 Q9UJA3 628 649 MCM8 DNA helicase MCM8 yes yes 3 8.102E-05 88.983 By MS/MS 1 7604100 7604100 0 3950 3012 4497 10063 9865 9865 6341 1 MNSYPYLADR PSSQRKVRMNSYPYLA SYPYLADRHYSREQRY R M N D R H 1 1 1 1 0 0 0 0 0 0 1 0 1 0 1 1 0 0 2 0 0 0 10 0 1228.5547 G3V1T9;J3KPD3;Q9Y580 G3V1T9 82 91 RBM7 RNA-binding protein 7 yes no 2 0.015062 54.023 By matching By MS/MS 1 1 21638000 11990000 9648000 3951 1067 4498 10064;10065 9866 9866 383 2015 1 MNVLADALK ________________ NVLADALKSINNAEKR R M N L K S 2 0 1 1 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 1 0 0 9 0 973.52665 H3BV27;H3BT37;I3L303;I3L3P7;I3L246;H3BN98;P62244 H3BV27 4 12 RPS15A 40S ribosomal protein S15a yes no 2 0.013802 72.879 By MS/MS 1 0 0 0 3952 1233 4499 10066 9867 9867 444 1 MPAGSPTK DDPKGSSKMPAGSPTK MPAGSPTKAKEDWCAK K M P T K A 1 0 0 0 0 0 0 1 0 0 0 1 1 0 2 1 1 0 0 0 0 0 8 0 787.38982 B3KXV3;E9PAP7;Q8IYP9 B3KXV3 242 249 ZDHHC23 Palmitoyltransferase;Palmitoyltransferase ZDHHC23 yes no 2 0.026518 49.06 By MS/MS 2 0 0 0 3953 542 4500 10067;10068 9868;9869 9869 214 2 MPCESSPPESADTPTSTR VAAGKTTKMPCESSPP ADTPTSTRRQPKTPLE K M P T R R 1 1 0 1 1 0 2 0 0 0 0 0 1 0 4 4 3 0 0 0 0 0 18 0 1948.8143 P46013 P46013 1371 1388 MKI67 Antigen KI-67 yes yes 2 0.011912 64.945 By MS/MS By MS/MS 1 1 17526000 8819700 8705900 3954 1833 4501;4502 10069;10070 9870;9871 9870 698 3466;3467 2 MPDEPEEPVVAVSSPAVPPPTK VFEMRFAKMPDEPEEP PAVPPPTKVVAPPSSS K M P T K V 2 0 0 1 0 0 3 0 0 0 0 1 1 0 7 2 1 0 0 4 0 0 22 0 2272.1297 M0QZD9;O60885 M0QZD9 457 478 BRD4 Bromodomain-containing protein 4 yes no 3 0.00020997 78.707 By MS/MS By MS/MS 1 1 28716000 17914000 10802000 3955 1413 4503 10071;10072 9872;9873 9873 494 2592;2593 2 MPDSTLPGSRVLARLDR EVTWSFSRMPDSTLPG RVLARLDRDSLVHSSP R M P D R D 1 3 0 2 0 0 0 1 0 0 3 0 1 0 2 2 1 0 0 1 0 0 17 2 1883.0047 Q9P2B2 Q9P2B2 320 336 PTGFRN Prostaglandin F2 receptor negative regulator yes yes 2 0.021955 56.122 By matching By MS/MS 1 1 6705000 3811500 2893400 3956 2975 4504 10073;10074 9874 9874 1180 1 MPEMNIKAPK KLKGPKFKMPEMNIKA EMNIKAPKISMPDVDL K M P P K I 1 0 1 0 0 0 1 0 0 1 0 2 2 0 2 0 0 0 0 0 0 0 10 1 1157.5937 Q09666 Q09666 936 945 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 2 0.028413 47.657 By MS/MS 1 0 0 0 3957 2020 4505 10075 9875 9875 798;799 1 MPEQEYEFPEPR KAKNARVKMPEQEYEF EYEFPEPRNLNNNMRR K M P P R N 0 1 0 0 0 1 4 0 0 0 0 0 1 1 3 0 0 0 1 0 0 0 12 0 1550.6711 Q9H6X2 Q9H6X2 420 431 ANTXR1 Anthrax toxin receptor 1 yes yes 2 0.019185 55.721 By MS/MS 1 3178900 0 3178900 3958 2845 4506 10076 9876 9876 1131 8462 1 MPETVPQEEMPGPPLNSESGEEAPTGR KKQSQESRMPETVPQE GEEAPTGRDKKRKQQQ R M P G R D 1 1 1 0 0 1 6 3 0 0 1 0 2 0 6 2 2 0 0 1 0 0 27 0 2865.2797 O15446 O15446 472 498 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 3 0.031287 40.098 By MS/MS By matching 1 1 18913000 10126000 8786200 3959 1483 4507 10077;10078 9877 9877 534;535 1 MPFQTSPGGK SPGKLLVKMPFQTSPG FQTSPGGKAEGGGATT K M P G K A 0 0 0 0 0 1 0 2 0 0 0 1 1 1 2 1 1 0 0 0 0 0 10 0 1048.5012 A0A087X1U4;P51608 A0A087X1U4 220 229 MECP2 Methyl-CpG-binding protein 2 yes no 2 0.0069326 62.582 By MS/MS By matching 1 1 8927700 4248900 4678800 3960 171 4508 10079;10080 9878 9878 74 278 1 MPHSYPALSAEQK ________________ PALSAEQKKELSDIAL - M P Q K K 2 0 0 0 0 1 1 0 1 0 1 1 1 0 2 2 0 0 1 0 0 0 13 0 1457.6973 J3QKK1;C9J8F3;J3KSV6;J3QKP5;A8MVZ9;P09972 J3QKK1 1 13 ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C yes no 2 0.029702 46.159 By MS/MS By matching 2 1 10763000 8492200 2270900 3961 500 4509 10081;10082;10083 9879 9879 197 1 MPLDLSPLATPIIR ASEDDIKKMPLDLSPL PLATPIIRSKIEEPSV K M P I R S 1 1 0 1 0 0 0 0 0 2 3 0 1 0 3 1 1 0 0 0 0 0 14 0 1535.8745 E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336;C9JCI8 E9PEK8 107 120 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes no 2 1.7971E-16 145.52 By MS/MS By MS/MS 2 2 36571000 22764000 13807000 3962 607 4510;4511 10084;10085;10086;10087 9880;9881;9882;9883 9880 239 1095 4 MPPLIADSPK GLKPHPERMPPLIADS PLIADSPKARCPLDAL R M P P K A 1 0 0 1 0 0 0 0 0 1 1 1 1 0 3 1 0 0 0 0 0 0 10 0 1067.5685 A0A087WXX9;P54646 A0A087WXX9 370 379 PRKAA2 5-AMP-activated protein kinase catalytic subunit alpha-2 yes no 2 0.003664 98.033 By MS/MS By MS/MS 3 3 14168000 2786000 11382000 3963 115 4512;4513 10088;10089;10090;10091;10092;10093 9884;9885;9886;9887;9888;9889 9884 44 202 6 MPQDGSDDEDEEWPTLEK RTTRLGPRMPQDGSDD EEWPTLEKAATMTAAG R M P E K A 0 0 0 4 0 1 4 1 0 0 1 1 1 0 2 1 1 1 0 0 0 0 18 0 2119.8528 F8WBL2;Q13895 F8WBL2 93 110 BYSL Bystin yes no 2;3 2.1063E-92 210.47 By MS/MS By MS/MS 4 4 817370000 428410000 388960000 3964 1050 4514;4515 10094;10095;10096;10097;10098;10099;10100;10101 9890;9891;9892;9893;9894;9895;9896;9897;9898;9899;9900 9895 378 1989 11 MPSARPPSPPLSSWER EEAAPSDRMPSARPPS PPLSSWERVSRLMEED R M P E R V 1 2 0 0 0 0 1 0 0 0 1 0 1 0 5 4 0 1 0 0 0 0 16 1 1793.8883 O43896 O43896 908 923 KIF1C Kinesin-like protein KIF1C yes yes 3 0.0084735 65.038 By MS/MS By matching 1 1 12402000 6471700 5930800 3965 1511 4516 10102;10103 9901;9902 9902 547 2845 2 MPTQSEEEKLSPSPTTEDPR WKKYGGLKMPTQSEEE SPTTEDPRVRSHVSRQ K M P P R V 0 1 0 1 0 1 4 0 0 0 1 1 1 0 4 3 3 0 0 0 0 0 20 1 2258.0373 E7EQY4;D6W5A2;E7EV10;Q9BTC8 E7EQY4 417 436 MTA3 Metastasis-associated protein MTA3 yes no 3 0.024965 47.088 By matching By MS/MS 1 1 8978600 3657900 5320700 3966 771 4517 10104;10105 9903 9903 1380 1 MQASIEKGGSLPK SVEDIKAKMQASIEKG EKGGSLPKVEAKFINY K M Q P K V 1 0 0 0 0 1 1 2 0 1 1 2 1 0 1 2 0 0 0 0 0 0 13 1 1344.7071 P06748 P06748 251 263 NPM1 Nucleophosmin yes yes 2;3 0.0063141 84.62 By MS/MS By MS/MS 3 3 55954000 29584000 26370000 3967 1647 4518;4519 10106;10107;10108;10109;10110;10111 9904;9905;9906;9907;9908 9906 601 3110 5 MQDKCREVLAWLEHNQLAEK IPEEDRRKMQDKCREV EHNQLAEKEEYEHQKR K M Q E K E 2 1 1 1 1 2 3 0 1 0 3 2 1 0 0 0 0 1 0 1 0 0 20 2 2497.2206 P17066 P17066 572 591 HSPA6 Heat shock 70 kDa protein 6 yes yes 3 0.025623 51.089 By MS/MS By matching 1 1 13024000 7477500 5546700 3968 1711 4520 10112;10113 9909 9909 1 MQFSFEEYEK RIILSNMRMQFSFEEY FSFEEYEKAQNPAYFE R M Q E K A 0 0 0 0 0 1 3 0 0 0 0 1 1 2 0 1 0 0 1 0 0 0 10 0 1336.5646 Q5JU85 Q5JU85 380 389 IQSEC2 IQ motif and SEC7 domain-containing protein 2 yes yes 2 0.0056951 80.469 By MS/MS 1 0 0 0 3969 2224 4521 10114 9910 9910 889 4454 1 MQFSFEGPEK RIVLSNMRMQFSFEGP FSFEGPEKVHSSYFEG R M Q E K V 0 0 0 0 0 1 2 1 0 0 0 1 1 2 1 1 0 0 0 0 0 0 10 0 1198.5329 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 163 172 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2 0.00028365 124.48 By MS/MS By MS/MS 2 2 71749000 39065000 32684000 3970 91 4522;4523 10115;10116;10117;10118 9911;9912;9913 9913 33 163 3 MQGNTCHR ________________ MQGNTCHRMSFHPGRG M M Q H R M 0 1 1 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 8 0 1002.4124 Q9NRR4;E5RHD1 Q9NRR4 2 9 DROSHA Ribonuclease 3 yes no 1 0.031941 46.457 By MS/MS 1 3997400 3997400 0 3971 2910 4524 10119 9914 9914 1154 0 MQLVPSIEERETPLTR MGPGLFLRMQLVPSIE ERETPLTREDRPALQE R M Q T R E 0 2 0 0 0 1 3 0 0 1 2 0 1 0 2 1 2 0 0 1 0 0 16 1 1897.9931 M0R0S8;Q96JL9 M0R0S8 110 125 ZNF333 Zinc finger protein 333 yes no 3 0.020914 57.798 By MS/MS 1 0 0 0 3972 1421 4525 10120 9915 9915 497 2608 1 MQNNEELPTYEEAK MEKQLSPRMQNNEELP LPTYEEAKVQSQYFRG R M Q A K V 1 0 2 0 0 1 4 0 0 0 1 1 1 0 1 0 1 0 1 0 0 0 14 0 1694.7458 Q4VCS5 Q4VCS5 100 113 AMOT Angiomotin yes yes 2;3 4.8159E-66 203.03 By MS/MS By MS/MS 3 4 337510000 157210000 180310000 3973 2197 4526;4527;4528 10121;10122;10123;10124;10125;10126;10127 9916;9917;9918;9919;9920;9921;9922 9921 107;108 879 7626;8362 7 MQNNSSPSISPNTSFTSDGSPSPLGGIK RQAAYEMRMQNNSSPS PSPLGGIKRKAEDSDS R M Q I K R 0 0 3 1 0 1 0 3 0 2 1 1 1 1 4 8 2 0 0 0 0 0 28 0 2806.308 Q9H0D6 Q9H0D6 466 493 XRN2 5-3 exoribonuclease 2 yes yes 2;3 4.6074E-05 75.005 By MS/MS By MS/MS 2 3 68671000 27167000 41504000 3974 2801 4529;4530 10128;10129;10130;10131;10132 9923;9924;9925;9926;9927 9924 1110 5853;5854;5855;5856;5857 5 MQNNSSPSISPNTSFTSDGSPSPLGGIKR RQAAYEMRMQNNSSPS SPLGGIKRKAEDSDSE R M Q K R K 0 1 3 1 0 1 0 3 0 2 1 1 1 1 4 8 2 0 0 0 0 0 29 1 2962.4091 Q9H0D6 Q9H0D6 466 494 XRN2 5-3 exoribonuclease 2 yes yes 3 0.0020181 60.943 By MS/MS By matching 2 2 41989000 22598000 19390000 3975 2801 4531 10133;10134;10135;10136 9928;9929 9929 1110 5853;5854;5855;5856;5857 2 MQQAGMALYKIVPK ARVGEYKKMQQAGMAL ALYKIVPKNPYYFWSV K M Q P K N 2 0 0 0 0 2 0 1 0 1 1 2 2 0 1 0 0 0 1 1 0 0 14 1 1576.8469 H0YHR9;Q14CX7 H0YHR9 94 107 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes no 2 0.026538 52.579 By MS/MS 1 0 0 0 3976 1188 4532 10137 9930 9930 434 1 MQQVGGNSQTESSLPGRSR VEHIERSKMQQVGGNS SSLPGRSRKERPTSLN K M Q S R K 0 2 1 0 0 3 1 3 0 0 1 0 1 0 1 4 1 0 0 1 0 0 19 1 2017.9599 A0A087WYG2 A0A087WYG2 184 202 MAPK8IP3 yes yes 2 0.031133 42.209 By MS/MS 1 0 0 0 3977 123 4533 10138 9931 9931 45 1 MQSLQLDCVAVPSSR NENAVVKRMQSLQLDC CVAVPSSRSNSATEQP R M Q S R S 1 1 0 1 1 2 0 0 0 0 2 0 1 0 1 3 0 0 0 2 0 0 15 0 1689.8178 Q13546 Q13546 318 332 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 2 2.5642E-07 131.37 By MS/MS By MS/MS 4 4 88831000 46149000 42682000 3978 2065 4534;4535;4536 10139;10140;10141;10142;10143;10144;10145;10146 9932;9933;9934;9935;9936;9937;9938;9939 9936 824 4077;4078;4079 7 MRANDALQVPRAQSTSTQMFR ________________ STSTQMFRMNVGPAMR - M R F R M 3 3 1 1 0 3 0 0 0 0 1 0 2 1 1 2 2 0 0 1 0 0 21 2 2407.1849 F8VRI5 F8VRI5 1 21 ERBB3 yes yes 3 0.012597 46.702 By MS/MS By matching 1 1 26782000 13543000 13239000 3979 1005 4537 10147;10148 9940 9940 1 MREDYDSVEQDGDEPGPQR SEEGSRARMREDYDSV GDEPGPQRSVEGWILF R M R Q R S 0 2 0 4 0 2 3 2 0 0 0 0 1 0 2 1 0 0 1 1 0 0 19 1 2221.9182 Q9Y5S9 Q9Y5S9 50 68 RBM8A RNA-binding protein 8A yes yes 3 5.9655E-05 97.94 By MS/MS By MS/MS 2 2 70682000 37129000 33552000 3980 3134 4538;4539 10149;10150;10151;10152 9941;9942;9943;9944;9945 9942 1244 6713 5 MREHVMNETLDQQQFFTEEELK EMEEERLRMREHVMNE FFTEEELKEYENIIAL R M R L K E 0 1 1 1 0 3 5 0 1 0 2 1 2 2 0 0 2 0 0 1 0 0 22 1 2781.2738 H0YEG8;Q2L696 H0YEG8 105 126 NUCB2;Nucb2 yes no 2 0.02636 54.09 By MS/MS 1 0 0 0 3981 1175 4540 10153 9946 9946 424 1 MRIPNYQLSPTKLPSINK MVSNTLAKMRIPNYQL TKLPSINKSKDRASQQ K M R N K S 0 1 2 0 0 1 0 0 0 2 2 2 1 0 3 2 1 0 1 0 0 0 18 2 2099.1561 A0A0C4DG07;O60934 A0A0C4DG07 342 359 NBN Nibrin yes no 3 0.0031096 81.226 By MS/MS 1 7347700 7347700 0 3982 304 4541 10154 9947 9947 120 531 1 MRKETPPPLVPPAAR ________________ PLVPPAAREWNLPPNA - M R A R E 2 2 0 0 0 0 1 0 0 0 1 1 1 0 5 0 1 0 0 1 0 0 15 2 1658.929 Q9BQA1 Q9BQA1 1 15 WDR77 Methylosome protein 50 yes yes 3 0.014164 57.53 By MS/MS By MS/MS 1 1 11258000 5778700 5479200 3983 2740 4542 10155;10156 9948;9949 9948 1089 7822 2 MRNHPPR VQSPVRVRMRNHPPRK RMRNHPPRKISTEDIN R M R P R K 0 2 1 0 0 0 0 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 7 1 906.46064 E5RJM2;E5RGN0;A0A087WZU2;Q00536;E5RIY8;E5RIU4 E5RJM2 101 107 CDK16 Cyclin-dependent kinase 16 yes no 2 0.026871 59.609 By MS/MS 1 0 0 0 3984 146 4543 10157 9950 9950 1 MRSYNPEGESSGRYR LAERLNIKMRSYNPEG GESSGRYREVRDEDDD K M R Y R E 0 3 1 0 0 0 2 2 0 0 0 0 1 0 1 3 0 0 2 0 0 0 15 2 1787.8009 H8Y6P7;P0CAP2;Q9BZD3 H8Y6P7 737 751 GCOM1;POLR2M;GCOM2 DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2 yes no 2 0.02155 58.676 By MS/MS 1 0 0 0 3985 1294 4544 10158 9951 9951 2396;2397 1 MSARTHGLLGQFFHPFDYKVSNLHPGSDPTK FYVLDSHRMSARTHGL HPGSDPTKTDATMVVK R M S T K T 1 1 1 2 0 1 0 3 3 0 3 2 1 3 3 3 2 0 1 1 0 0 31 2 3483.7146 CON__Q0VCM5 CON__Q0VCM5 818 848 yes yes 3 0.028391 46.307 By MS/MS 1 0 0 0 + 3986 716 4545 10159 9952 9952 276 1321;1322;1323 1 MSCFSRPSMSPTPLDR PVALNSSRMSCFSRPS MSPTPLDRCRSPGMLE R M S D R C 0 2 0 1 1 0 0 0 0 0 1 0 2 1 3 4 1 0 0 0 0 0 16 1 1867.8379 Q9UQ35 Q9UQ35 2114 2129 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.00058776 114.56 By MS/MS By MS/MS 5 5 395640000 198040000 197600000 3987 3074 4546;4547;4548;4549 10160;10161;10162;10163;10164;10165;10166;10167;10168;10169 9953;9954;9955;9956;9957;9958;9959 9958 1228;1229 6535;6536;7930 6 MSEQSICQARASVMVYDDTSKK ________________ VYDDTSKKWVPIKPGQ - M S K K W 2 1 0 2 1 2 1 0 0 1 0 2 2 0 0 4 1 0 1 2 0 0 22 2 2533.1611 Q9UI08 Q9UI08 1 22 EVL Ena/VASP-like protein yes yes 3 0.029676 43.326 By MS/MS 1 0 0 0 3988 3008 4550 10170 9960 9960 1198;1199 1 MSESPTPCSGSSFEETEALVNTAAK PVKSSPVRMSESPTPC ALVNTAAKNQHPVPRG R M S A K N 3 0 1 0 1 0 4 1 0 0 1 1 1 1 2 5 3 0 0 1 0 0 25 0 2629.1524 H0Y911;Q4VXL4;D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359 H0Y911 301 325 TACC2 Transforming acidic coiled-coil-containing protein 2 yes no 3 0.031725 42.454 By MS/MS 1 7203700 7203700 0 3989 739 4551 10171 9961 9961 282 0 MSEVTKNSLEKILPQLK ________________ EKILPQLKCHFTWNLF - M S L K C 0 0 1 0 0 1 2 0 0 1 3 3 1 0 1 2 1 0 0 1 0 0 17 2 1957.0918 O14879 O14879 1 17 IFIT3 Interferon-induced protein with tetratricopeptide repeats 3 yes yes 3 0.029962 48.823 By MS/MS 1 0 0 0 3990 1460 4552 10172 9962 9962 524 1 MSGFIYQGK LMLSASPRMSGFIYQG SGFIYQGKLPTTGMTI R M S G K L 0 0 0 0 0 1 0 2 0 1 0 1 1 1 0 1 0 0 1 0 0 0 9 0 1029.4954 B1ALK7;E9PDQ5;Q14155;F6SJA5;E7EUY6;Q15052 B1ALK7 339 347 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 no no 2 0.0046995 99.788 By MS/MS By MS/MS 2 2 241930000 134620000 107310000 3991 527;2123 4553;4554 10173;10174;10175;10176 9963;9964;9965;9966;9967 9966 207;845 989;4199 5 MSGFIYQGKLPTTGMTITK LMLSASPRMSGFIYQG TTGMTITKLEDSENHR R M S T K L 0 0 0 0 0 1 0 3 0 2 1 2 2 1 1 1 4 0 1 0 0 0 19 1 2073.0639 B1ALK7;E9PDQ5;Q14155;F6SJA5;E7EUY6 B1ALK7 339 357 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes no 3 0.031931 49.125 By MS/MS 1 0 0 0 3992 527 4555 10177 9968 9968 207;208 989 1 MSGSPVQK HCPSPVGKMSGSPVQK MSGSPVQKPTLHRSIS K M S Q K P 0 0 0 0 0 1 0 1 0 0 0 1 1 0 1 2 0 0 0 1 0 0 8 0 832.41129 Q6ZRF8 Q6ZRF8 392 399 RNF207 RING finger protein 207 yes yes 1 0.0096799 56.404 By MS/MS By MS/MS 2 2 134660000 68053000 66604000 3993 2351 4556 10178;10179;10180;10181 9969;9970 9969 948 4770;4771 2 MSHPSPQAKPSNPSNPR ________________ PSNPSNPRVFFDVDIG - M S P R V 1 1 2 0 0 1 0 0 1 0 0 1 1 0 5 4 0 0 0 0 0 0 17 1 1830.8795 Q08752 Q08752 1 17 PPID Peptidyl-prolyl cis-trans isomerase D yes yes 2 0.0083942 61.226 By MS/MS By matching 1 1 22601000 12183000 10418000 3994 2014 4557 10182;10183 9971 9971 796 3883 1 MSLKDDDSGDHDQNEENSTQK ________________ NEENSTQKDGEKEKTE - M S Q K D 0 0 2 5 0 2 2 1 1 0 1 2 1 0 0 3 1 0 0 0 0 0 21 1 2391.9721 C9JEL3 C9JEL3 1 21 EIF4E2 yes yes 2 0.024624 56.569 By MS/MS 1 0 0 0 3995 660 4558 10184 9972 9972 258 1224;1225 1 MSLRGSLSR ________________ SLRGSLSRLLQTRVHS - M S S R L 0 2 0 0 0 0 0 1 0 0 2 0 1 0 0 3 0 0 0 0 0 0 9 1 1005.5389 P78540 P78540 1 9 ARG2 Arginase-2, mitochondrial yes yes 1 0.018892 47.849 By MS/MS 1 3252200 3252200 0 3996 1965 4559 10185 9973 9973 773 3754 1 MSLTAIYDKRR TTVRLDKRMSLTAIYD TAIYDKRRETDYSDKG R M S R R E 1 2 0 1 0 0 0 0 0 1 1 1 1 0 0 1 1 0 1 0 0 0 11 2 1352.7235 Q68DQ2 Q68DQ2 1965 1975 CRYBG3 Very large A-kinase anchor protein yes yes 3 0.022978 50.562 By MS/MS 1 0 0 0 3997 2296 4560 10186 9974 9974 918 4617 1 MSNPSPQVPEEEASTSVCRPKSSMASTSR ________________ SSMASTSRRQRRERRF - M S S R R 2 2 1 0 1 1 3 0 0 0 0 1 2 0 4 8 2 0 0 2 0 0 29 2 3136.4223 F2Z390;A0A140TA04;A0A0A0MRT5;Q9UBC1 F2Z390 1 29 NFKBIL1 NF-kappa-B inhibitor-like protein 1 yes no 3 0.032347 40.997 By MS/MS 1 23557000 0 23557000 3998 230 4561 10187 9975 9975 97 1 MSNSHTLSSSSTSTSSSENSIK TIQKFVSRMSNSHTLS SSSENSIKDEEEQMCP R M S I K D 0 0 2 0 0 0 1 0 1 1 1 1 1 0 0 11 3 0 0 0 0 0 22 0 2257.9968 Q13233 Q13233 415 436 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 yes yes 2 0.032353 44.587 By MS/MS 1 0 0 0 3999 2050 4562 10188 9976 9976 1 MSPNETLFLESTNK IQKVVFHKMSPNETLF LFLESTNKIYKDDISN K M S N K I 0 0 2 0 0 0 2 0 0 0 2 1 1 1 1 2 2 0 0 0 0 0 14 0 1609.7658 Q9HB90;Q9NQL2 Q9HB90 85 98 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 2 9.4813E-28 172.26 By MS/MS By MS/MS 2 2 90079000 44799000 45280000 4000 2866 4563;4564 10189;10190;10191;10192 9977;9978;9979;9980;9981;9982 9982 1136 6034;7861 6 MSQLPMPGGTAPSPLR MADLVVSKMSQLPMPG GTAPSPLRPWAPQIKS K M S L R P 1 1 0 0 0 1 0 2 0 0 2 0 2 0 4 2 1 0 0 0 0 0 16 0 1638.8222 A0A087WTG8;A0A0A0MR68;O14994 A0A087WTG8 136 151 SYN3 Synapsin-3 yes no 2 0.030117 40.475 By MS/MS 1 1126200 0 1126200 4001 33 4565 10193 9983 9983 16 0 MSQPGSPSPK AEVEENKKMSQPGSPS QPGSPSPKTPTPSTPG K M S P K T 0 0 0 0 0 1 0 1 0 0 0 1 1 0 3 3 0 0 0 0 0 0 10 0 1014.4804 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 1523 1532 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0041428 70.552 By MS/MS By MS/MS 1 1 68224000 17722000 50502000 4002 319 4566 10194;10195 9984;9985;9986;9987;9988;9989;9990 9988 124 555;556 7 MSSHTETSSFLQTLTGR AMDRSCNRMSSHTETS FLQTLTGRLPTKKLFH R M S G R L 0 1 0 0 0 1 1 1 1 0 2 0 1 1 0 4 4 0 0 0 0 0 17 0 1881.8891 Q96N67;A0A1B0GWE0 Q96N67 962 978 DOCK7 Dedicator of cytokinesis protein 7 no no 2;3 2.7019E-16 147.6 By MS/MS By MS/MS 3 3 91633000 47720000 43913000 4003 2689;433 4567;4568 10196;10197;10198;10199;10200;10201 9991;9992;9993;9994;9995;9996;9997 9995 169 811;6958 7 MSSLAAK ________________ ________________ - M S A K R 2 0 0 0 0 0 0 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 7 0 706.36836 Q6ZN50 Q6ZN50 1 7 OSBP2 Oxysterol-binding protein yes yes 2 0.022232 55.441 By MS/MS 1 0 0 0 4004 2349 4569 10202 9998 9998 947 4766 1 MSSNESPLMGLRLQGFKK M S K K 0 1 1 0 0 1 1 2 0 0 3 2 2 1 1 3 0 0 0 0 0 0 18 2 2022.0391 REV__Q86Z20 yes yes 3 0.02314 41.912 By MS/MS 1 50286000 50286000 0 + 4005 3216 4570 10203 9999 9999 1264;1265 6812 1 MTDQEAIQDLWQWR NYVKNCFRMTDQEAIQ IQDLWQWRKSL_____ R M T W R K 1 1 0 2 0 3 1 0 0 1 1 0 1 0 0 0 1 2 0 0 0 0 14 0 1818.8359 P06748 P06748 278 291 NPM1 Nucleophosmin yes yes 2 9.6524E-95 222.2 By MS/MS 1 15063000 0 15063000 4006 1647 4571 10204 10000 10000 602 1 MTEEEVEMLVAGHEDSNGCINYEELVR VLVTLGEKMTEEEVEM INYEELVRMVLNG___ K M T V R M 1 1 2 1 1 0 7 2 1 1 2 0 2 0 0 1 1 0 1 3 0 0 27 0 3152.3737 G8JLA2;F8VZU9;F8W180;F8VXL3 G8JLA2 121 147 MYL6 yes no 3 0.0020208 58.758 By matching By MS/MS 1 1 13343000 6888300 6455000 4007 1107 4572 10205;10206 10001 10001 396;397 2088 1 MTGSAPPPSPTPNK GCQTSRTKMTGSAPPP PPSPTPNKEMKNKAVL K M T N K E 1 0 1 0 0 0 0 1 0 0 0 1 1 0 5 2 2 0 0 0 0 0 14 0 1380.6708 Q9UBW7 Q9UBW7 830 843 ZMYM2 Zinc finger MYM-type protein 2 yes yes 2 0.012527 57.149 By MS/MS 1 2032700 2032700 0 4008 2994 4573 10207 10002 10002 1187 6295 1 MTGSPTLVK YQKRRPPKMTGSPTLV TGSPTLVKNMISGLSY K M T V K N 0 0 0 0 0 0 0 1 0 0 1 1 1 0 1 1 2 0 0 1 0 0 9 0 932.5001 B7ZBM3;Q8IVH2 B7ZBM3 539 547 FOXP4 Forkhead box protein P4 yes no 2 0.005824 67.494 By MS/MS By MS/MS 1 1 25885000 13147000 12738000 4009 596 4574 10208;10209 10003;10004 10004 236 1086 2 MTNNEDSLSPTSSTLSNLELDAAEK FLSSSPLRMTNNEDSL LELDAAEKDRKLQEKE R M T E K D 2 0 3 2 0 0 3 0 0 0 4 1 1 0 1 5 3 0 0 0 0 0 25 0 2666.2229 Q9ULH7 Q9ULH7 535 559 MKL2 MKL/myocardin-like protein 2 yes yes 2;3 4.7008E-06 86.131 By MS/MS By MS/MS 2 1 25858000 15774000 10084000 4010 3042 4575 10210;10211;10212 10005;10006;10007 10007 1206 6407;6408 3 MTNNEDSLSPTSSTLSNLELDAAEKDR FLSSSPLRMTNNEDSL LDAAEKDRKLQEKEKQ R M T D R K 2 1 3 3 0 0 3 0 0 0 4 1 1 0 1 5 3 0 0 0 0 0 27 1 2937.3509 Q9ULH7 Q9ULH7 535 561 MKL2 MKL/myocardin-like protein 2 yes yes 3 0.0001421 75.43 By MS/MS By MS/MS 1 1 27973000 12370000 15603000 4011 3042 4576 10213;10214 10008;10009 10008 1206 6407;6408 2 MTNSPVLPVGSTTNGSR VNLQSPLKMTNSPVLP GSTTNGSRSSTPSPSP K M T S R S 0 1 2 0 0 0 0 2 0 0 1 0 1 0 2 3 3 0 0 2 0 0 17 0 1716.8465 P37275 P37275 683 699 ZEB1 Zinc finger E-box-binding homeobox 1 yes yes 2 0.0029463 68.525 By MS/MS By MS/MS 1 1 9095300 5168500 3926800 4012 1804 4577 10215;10216 10010;10011 10011 84 683 3409 2 MTWPNNIVKTMSK TTRQRPGKMTWPNNIV NIVKTMSKERDVFLVK K M T S K E 0 0 2 0 0 0 0 0 0 1 0 2 2 0 1 1 2 1 0 1 0 0 13 1 1548.7793 F5H8F7;Q9UBL3 F5H8F7 78 90 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 2 0.013881 65.278 By MS/MS 1 3284500 0 3284500 4013 989 4578 10217 10012 10012 1862;7146;7147 0 MVCSPVTVR VLSPRNSRMVCSPVTV VCSPVTVRIAPPDRRF R M V V R I 0 1 0 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 3 0 0 9 0 1047.5205 A0A087WY75;A0A075B7F8;A8CG34;A8MY32;Q96HA1 Q96HA1 266 274 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 no no 2 0.0013805 96.113 By MS/MS By MS/MS 2 2 29977000 15491000 14485000 4014 2660;24 4579;4580 10218;10219;10220;10221 10013;10014;10015;10016 10014 10 45 4 MVDPEKPQLGMIDR GQVRLSKKMVDPEKPQ PQLGMIDRWYHPGCFV K M V D R W 0 1 0 2 0 1 1 1 0 1 1 1 2 0 2 0 0 0 0 1 0 0 14 1 1627.8062 P09874 P09874 143 156 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.013136 51.092 By MS/MS By MS/MS 1 1 9554700 4142900 5411800 4015 1665 4581 10222;10223 10017;10018;10019 10019 617;618 3 MVEPENAVTITPLRPEDDYSPR QMRVWRERMVEPENAV PEDDYSPRERRGGGLR R M V P R E 1 2 1 2 0 0 3 0 0 1 1 0 1 0 4 1 2 0 1 2 0 0 22 1 2528.2217 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YDF9 A0A0G2JNZ2 816 837 SCRIB Protein scribble homolog yes no 3 7.9414E-05 105.5 By MS/MS By MS/MS 5 6 349980000 186570000 163410000 4016 361 4582;4583;4584 10224;10225;10226;10227;10228;10229;10230;10231;10232;10233;10234 10020;10021;10022;10023;10024;10025;10026;10027;10028;10029 10028 143 658;8032 9 MVIQGPSSPQGEAMVTDVLEDQK PVSPASQKMVIQGPSS TDVLEDQKEGRSTNKE K M V Q K E 1 0 0 2 0 3 2 2 0 1 1 1 2 0 2 2 1 0 0 3 0 0 23 0 2458.172 Q12888;A6NNK5 Q12888 1107 1129 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2;3 5.8458E-06 109.85 By MS/MS By MS/MS 2 3 173400000 80767000 92629000 4017 2031 4585;4586 10235;10236;10237;10238;10239 10030;10031;10032;10033;10034;10035;10036;10037 10034 804;805 3958;3959 8 MVIQGPSSPQGEAMVTDVLEDQKEGR PVSPASQKMVIQGPSS LEDQKEGRSTNKENPS K M V G R S 1 1 0 2 0 3 3 3 0 1 1 1 2 0 2 2 1 0 0 3 0 0 26 1 2800.3371 Q12888;A6NNK5 Q12888 1107 1132 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 2.5248E-07 98.887 By MS/MS By MS/MS 4 4 233030000 99474000 133550000 4018 2031 4587;4588;4589 10240;10241;10242;10243;10244;10245;10246;10247 10038;10039;10040;10041;10042;10043;10044;10045;10046;10047 10047 804;805 3958;3959 10 MVISEPGLNWDISPK ________________ LNWDISPKNGLKTFFS K M V P K N 0 0 1 1 0 0 1 1 0 2 1 1 1 0 2 2 0 1 0 1 0 0 15 0 1684.8494 H0YN09;H0YK14;H0YMX6;H0YL35;H0YK97;H0YNU9;Q659A1 H0YN09 5 19 ICE2 Little elongation complex subunit 2 yes no 2 0.0025832 90.853 By MS/MS By MS/MS 1 1 3410900 3410900 0 4019 1197 4590 10248;10249 10048;10049 10048 437 2240 2 MVLLEDSGSADFR ________________ DSGSADFRRHFVNLSP R M V F R R 1 1 0 2 0 0 1 1 0 0 2 0 1 1 0 2 0 0 0 1 0 0 13 0 1438.6762 C9JHR8;Q86VB7 C9JHR8 6 18 CD163 Scavenger receptor cysteine-rich type 1 protein M130;Soluble CD163 yes no 2 0.025441 52.576 By MS/MS 1 0 0 0 4020 665 4591 10250 10050 10050 260 1232;1233 1 MVTGNGSLKR KVARKRKRMVTGNGSL TGNGSLKRKSSRKETP R M V K R K 0 1 1 0 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 1 0 0 10 1 1061.5652 P52701;A0A087WWJ1 P52701 303 312 MSH6 DNA mismatch repair protein Msh6 yes no 2 0.0059979 75.819 By matching By MS/MS 1 2 8871400 3764800 5106600 4021 1888 4592 10251;10252;10253 10051;10052 10051 92 3659 1 MVTLFNHGGASR ________________ FNHGGASRPFSKVAVP - M V S R P 1 1 1 0 0 0 0 2 1 0 1 0 1 1 0 1 1 0 0 1 0 0 12 0 1288.6346 A0A087WZA6 A0A087WZA6 1 12 SCAMP1 yes yes 2 0.031662 44.318 By MS/MS 1 1235400 0 1235400 4022 138 4593 10254 10053 10053 50 0 MVTVCPNTESCESITLK EENSKEDKMVTVCPNT SCESITLKDVAVNFSR K M V L K D 0 0 1 0 2 0 2 0 0 1 1 1 1 0 1 2 3 0 0 2 0 0 17 0 1967.9002 Q6P088;Q8TF39 Q6P088 157 173 ZNF483 Zinc finger protein 483 yes no 2 0.022008 57.567 By MS/MS 1 0 0 0 4023 2311 4594 10255 10054 10054 928 4661 1 MVVESAYEVIK ENWKEVHKMVVESAYE ESAYEVIKLKGYTNWA K M V I K L 1 0 0 0 0 0 2 0 0 1 0 1 1 0 0 1 0 0 1 3 0 0 11 0 1266.653 P07195 P07195 234 244 LDHB L-lactate dehydrogenase B chain yes yes 2 2.4124E-05 136.99 By MS/MS By MS/MS 1 1 24619000 12793000 11826000 4024 1649 4595 10256;10257 10055;10056 10056 603 2 MVVPAALK PPYDKKKRMVVPAALK MVVPAALKVVRLKPTR R M V L K V 2 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 2 0 0 8 0 827.4939 Q8J015;M0QYS1;Q6NVV1;P40429 Q8J015 57 64 RPL13a;RPL13A;RPL13AP3 Putative 60S ribosomal protein L13a protein RPL13AP3;60S ribosomal protein L13a yes no 2 0.018802 80.555 By MS/MS By MS/MS 1 1 2517700 0 2517700 4025 1408 4596 10258;10259 10057;10058 10057 488 2 MWNDIELLTNDDTGSGYLSVGSR ________________ GYLSVGSRKEHGTALY - M W S R K 0 1 2 3 0 0 1 3 0 1 3 0 1 0 0 3 2 1 1 1 0 0 23 0 2542.1646 P50748;E7ES84 P50748 1 23 KNTC1 Kinetochore-associated protein 1 yes no 3 0.029017 49.94 By MS/MS 1 0 0 0 4026 1869 4597 10260 10059 10059 1 MYDEETRILHSHISDTSVIVKMDNSR QETDFLRRMYDEETRI IVKMDNSRDLNMDCVV R M Y S R D 0 2 1 3 0 0 2 0 2 3 1 1 2 0 0 4 2 0 1 2 0 0 26 2 3075.4754 CON__Q61726 CON__Q61726 240 265 yes yes 3 0.022027 53.266 By MS/MS 1 0 0 0 + 4027 719 4598 10261 10060 10060 1325 1 MYLQQDELEEEEDERGPTPPVR PCPVPPARMYLQQDEL RGPTPPVRGAASSPAA R M Y V R G 0 2 0 2 0 2 6 1 0 0 2 0 1 0 3 0 1 0 1 1 0 0 22 1 2659.2072 A0A0A0MSX4;Q9Y6N7;A0A087WZ85;A0A087WTM1;H7C545 A0A0A0MSX4 1103 1124 ROBO1 Roundabout homolog 1 yes no 3 0.019965 45.577 By MS/MS By matching 1 1 47178000 28456000 18722000 4028 262 4599 10262;10263 10061 10061 107 1 MYPPRSPK PPPPAVGRMYPPRSPK MYPPRSPKSAAPAPIS R M Y P K S 0 1 0 0 0 0 0 0 0 0 0 1 1 0 3 1 0 0 1 0 0 0 8 1 974.50077 Q8WWM7;H3BUF6 Q8WWM7 444 451 ATXN2L Ataxin-2-like protein yes no 3 0.024828 49.35 By MS/MS 1 4086000 4086000 0 4029 2564 4600 10264 10062 10062 5244 1 MYSYPAR FQRDYYDRMYSYPARV RMYSYPARVPPPPPIA R M Y A R V 1 1 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 2 0 0 0 7 0 886.40072 G3V2Q1;P07910;G3V5V7;G3V576;G3V555;G3V575;G3V4C1;B2R5W2;G3V2D6;G3V4W0;B4DY08 G3V4C1 136 142 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 no no 2 0.021206 52.636 By matching By MS/MS 1 1 13815000 8191200 5623900 4030 1069;1079 4601 10265;10266 10063 10063 385 2024 1 MYVDPSEINPSMPQR NSLYDVSRMYVDPSEI INPSMPQRTVKALYDY R M Y Q R T 0 1 1 1 0 1 1 0 0 1 0 0 2 0 3 2 0 0 1 1 0 0 15 0 1762.8018 A0A0A0MRF9;P16885 A0A0A0MRF9 758 772 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 2 0.0040238 63.091 By matching By MS/MS 1 1 7673200 4072900 3600300 4031 212 4602 10267;10268 10064 10064 88;89 8008 1 NAAFGQSGGAGSDSNSPGNVQPNSAPSVESHPVLEK RWVAPRNRNAAFGQSG ESHPVLEKLKAAHSYN R N A E K L 4 0 4 1 0 2 2 5 1 0 1 1 0 1 4 7 0 0 0 3 0 0 36 0 3492.6142 Q9BYJ9 Q9BYJ9 335 370 YTHDF1 YTH domain-containing family protein 1 yes yes 3 0.013219 40.937 By MS/MS 1 12588000 12588000 0 4032 2779 4603 10269 10065 10065 5783 1 NAASFPLRSPQPVCSPAGSEGTPK DGDSSTMRNAASFPLR AGSEGTPKGSRPPLIL R N A P K G 3 1 1 0 1 1 1 2 0 0 1 1 0 1 5 4 1 0 0 1 0 0 24 1 2454.1962 Q6KC79 Q6KC79 266 289 NIPBL Nipped-B-like protein yes yes 3 6.6962E-06 108.69 By MS/MS By MS/MS 1 1 22058000 15606000 6452500 4033 2307 4604;4605 10270;10271 10066;10067 10066 4654;4655 2 NADMSEEMQQDSVECATQALEK CDRKAVIKNADMSEEM CATQALEKYNIEKDIA K N A E K Y 3 0 1 2 1 3 4 0 0 0 1 1 2 0 0 2 1 0 0 1 0 0 22 0 2513.0356 F8VXI7;F8VXL2;F8VRV5;P63167 F8VXI7 10 31 DYNLL1 Dynein light chain 1, cytoplasmic yes no 3 1.7046E-05 99.603 By MS/MS 1 5346400 0 5346400 4034 1006 4606 10272 10068;10069;10070 10069 364 3 NADSEIKHSTPSPTR LYKNGSLRNADSEIKH HSTPSPTRYSLSPSKS R N A T R Y 1 1 1 1 0 0 1 0 1 1 0 1 0 0 2 3 2 0 0 0 0 0 15 1 1638.7962 P49792 P49792 770 784 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 3 0.014332 55.176 By MS/MS By matching 1 1 15422000 6391300 9030800 4035 1860 4607 10273;10274 10071 10071 3604;3605 1 NAEAVLQSPGLSGK VLTVDYTRNAEAVLQS QSPGLSGKVKRDAEKK R N A G K V 2 0 1 0 0 1 1 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1369.7201 Q13045 Q13045 849 862 FLII Protein flightless-1 homolog yes yes 2 1.8548E-53 193.54 By MS/MS By MS/MS 1 1 34348000 16399000 17948000 4036 2038 4608 10275;10276 10072;10073 10072 4003 2 NAEDCLYELPENIR EEQKVKPKNAEDCLYE YELPENIRVSSAKKTE K N A I R V 1 1 2 1 1 0 3 0 0 1 2 0 0 0 1 0 0 0 1 0 0 0 14 0 1734.7883 Q9NZ63 Q9NZ63 141 154 C9orf78 Uncharacterized protein C9orf78 yes yes 2;3 3.0146E-33 177.16 By MS/MS By MS/MS 2 1 102440000 56159000 46277000 4037 2955 4609 10277;10278;10279 10074;10075;10076;10077 10074 8481 4 NAETPEATTQQETDTDLPEAPPPPLEPAVIAR QAADTSRRNAETPEAT LEPAVIARPGCVNLSL R N A A R P 5 1 1 2 0 2 5 0 0 1 2 0 0 0 7 0 5 0 0 1 0 0 32 0 3397.6525 Q8N163;G3V119;H0YB24 Q8N163 481 512 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 3 0.00011982 63.316 By MS/MS By MS/MS 1 2 41922000 17605000 24318000 4038 2457 4610 10280;10281;10282 10078;10079;10080 10080 7715;7716 3 NAISLPQLNQAAYDSLVVGK PAISPIIKNAISLPQL YDSLVVGKLSFDSSPT K N A G K L 3 0 2 1 0 2 0 1 0 1 3 1 0 0 1 2 0 0 1 2 0 0 20 0 2100.1215 Q00587 Q00587 118 137 CDC42EP1 Cdc42 effector protein 1 yes yes 2 0.00022996 113.52 By MS/MS By MS/MS 2 2 31330000 16009000 15321000 4039 1974 4611 10283;10284;10285;10286 10081;10082 10081 3783;8314 2 NAKTSPLSSDKITTGYK ACLQLTARNAKTSPLS DKITTGYKYKRLQRQI R N A Y K Y 1 0 1 1 0 0 0 1 0 1 1 3 0 0 1 3 3 0 1 0 0 0 17 2 1809.9472 X6R383;A0A087WYZ9;Q96T68 X6R383 302 318 SETDB2 Histone-lysine N-methyltransferase SETDB2 yes no 2 0.019281 64.224 By MS/MS 1 16839000 16839000 0 4040 132 4612 10287 10083 10083 219 1 NALKQETEVELYNEFPEPIK QAFQTIARNALKQETE NEFPEPIKLDKNDRAK R N A I K L 1 0 2 0 0 1 5 0 0 1 2 2 0 1 2 0 1 0 1 1 0 0 20 1 2390.2006 P51149;C9J8S3;C9J4S4;C9J4V0 P51149 172 191 RAB7A Ras-related protein Rab-7a yes no 3 3.5484E-07 132.74 By MS/MS 2 15798000 0 15798000 4041 1874 4613 10288;10289 10084;10085;10086 10084 8293 3 NALKQETEVELYNEFPEPIKLDK QAFQTIARNALKQETE PEPIKLDKNDRAKASA R N A D K N 1 0 2 1 0 1 5 0 0 1 3 3 0 1 2 0 1 0 1 1 0 0 23 2 2746.4065 P51149;C9J8S3;C9J4S4;C9J4V0 P51149 172 194 RAB7A Ras-related protein Rab-7a yes no 3 1.4538E-12 140.47 By matching By MS/MS 1 2 29045000 13511000 15534000 4042 1874 4614 10290;10291;10292 10087;10088 10087 8293 2 NALPPVLTTVNGQSPPEHSAPAK PKVNPWTKNALPPVLT PEHSAPAKVVRAAVPK K N A A K V 3 0 2 0 0 1 1 1 1 0 2 1 0 0 5 2 2 0 0 2 0 0 23 0 2324.2125 Q6PKG0;A0A0B4J210;H0YBM7 Q6PKG0 130 152 LARP1 La-related protein 1 yes no 3 8.9446E-05 98.967 By MS/MS By MS/MS 4 4 238010000 116210000 121800000 4043 2330 4615;4616 10293;10294;10295;10296;10297;10298;10299;10300 10089;10090;10091;10092;10093;10094;10095;10096;10097;10098 10090 113;162 4700 10 NALTTLAGPLTPPVK LECQYLNKNALTTLAG GPLTPPVKHFQLKRKP K N A V K H 2 0 1 0 0 0 0 1 0 0 3 1 0 0 3 0 3 0 0 1 0 0 15 0 1491.8661 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4;H7C0W2 H0Y3X6 151 165 NELFA Negative elongation factor A yes no 2 0.0002184 119.46 By MS/MS By MS/MS 1 1 13232000 8891600 4340200 4044 300 4617 10301;10302 10099;10100 10100 6921 2 NANQQKQDGNWGSWTKFGSCSR YKGHCMWKNANQQKQD TKFGSCSRTCGTGVRF K N A S R T 1 1 3 1 1 3 0 3 0 0 0 2 0 1 0 3 1 2 0 0 0 0 22 2 2555.136 O15072 O15072 544 565 ADAMTS3 A disintegrin and metalloproteinase with thrombospondin motifs 3 yes yes 3 0.031285 43.241 By MS/MS 1 0 0 0 4045 1470 4618 10303 10101 10101 1 NAPAAVDEGSISPR NRRQARGRNAPAAVDE DEGSISPRTLSAIKRA R N A P R T 3 1 1 1 0 0 1 1 0 1 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1382.679 R4GMW8;P28715 R4GMW8 799 812 BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells yes no 2 0.00092372 111.11 By MS/MS By MS/MS 1 1 80500000 44214000 36286000 4046 3158 4619 10304;10305 10102;10103 10102 6756 2 NAQDDMYGVSKNCIYTINQSAKESLR N A L R 2 1 3 2 1 2 1 1 0 2 1 2 1 0 0 3 1 0 2 1 0 0 26 2 3004.4019 REV__A0A087WYX9 yes no 3 0.032356 40.669 By MS/MS 1 6799300 0 6799300 + 4047 3163 4620 10306 10104 10104 1254 1 NASASFQELEDK AFVKRRNRNASASFQE SFQELEDKKELSEESE R N A D K K 2 0 1 1 0 1 2 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 12 0 1337.6099 F2Z3H0;F2Z3N9;H7C3L7;Q99543 F2Z3H0 45 56 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 2 2.6549E-09 137.09 By MS/MS By MS/MS 2 2 60086000 29650000 30436000 4048 936 4621;4622 10307;10308;10309;10310 10105;10106;10107;10108 10106 1755;1756 3 NASASFQELEDKK AFVKRRNRNASASFQE FQELEDKKELSEESED R N A K K E 2 0 1 1 0 1 2 0 0 0 1 2 0 1 0 2 0 0 0 0 0 0 13 1 1465.7049 F2Z3H0;F2Z3N9;H7C3L7;Q99543 F2Z3H0 45 57 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 2 2.2972E-06 129.29 By MS/MS By MS/MS 1 1 145250000 71047000 74202000 4049 936 4623 10311;10312 10109;10110 10109 1755;1756 2 NASTFEDVTQVSSAYQK VQKDRMDKNASTFEDV QVSSAYQKTVPVEAVT K N A Q K T 2 0 1 1 0 2 1 0 0 0 0 1 0 1 0 3 2 0 1 2 0 0 17 0 1873.8694 Q14247 Q14247 320 336 CTTN Src substrate cortactin yes yes 2 6.5106E-53 190.34 By MS/MS By MS/MS 1 1 49918000 27298000 22620000 4050 2087 4624 10313;10314 10111;10112 10112 8340 2 NASVPNLR ________________ NASVPNLRGSEERLLA R N A L R G 1 1 2 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 8 0 869.47191 E9PPF9;E9PLD2;Q9H019;E9PNJ0;E9PPQ0;E9PRW1;E9PSD6;C9JF50;E9PLU1;E9PRK5 E9PPF9 4 11 MTFR1L Mitochondrial fission regulator 1-like yes no 2 0.010559 90.15 By MS/MS By MS/MS 1 1 76661000 36373000 40288000 4051 901 4625 10315;10316 10113;10114 10113 1679 2 NASVYSPSGPVNR RTTLTRERNASVYSPS SPSGPVNRRTTTPPDS R N A N R R 1 1 2 0 0 0 0 1 0 0 0 0 0 0 2 3 0 0 1 2 0 0 13 0 1346.6579 Q9NS56 Q9NS56 189 201 TOPORS E3 ubiquitin-protein ligase Topors yes yes 2 0.0007802 98.253 By MS/MS By MS/MS 1 1 7291300 2329500 4961700 4052 2912 4626 10317;10318 10115;10116 10116 6143 2 NATDLQNSSMSEEELTK ETLSGLAKNATDLQNS MSEEELTKAMEGLGMD K N A T K A 1 0 2 1 0 1 3 0 0 0 2 1 1 0 0 3 2 0 0 0 0 0 17 0 1895.8419 Q5QNY5;H0YJ60;P40855 Q5QNY5 119 135 PEX19 Peroxisomal biogenesis factor 19 yes no 2 5.7162E-143 245.04 By MS/MS By MS/MS 1 1 158320000 72533000 85789000 4053 1193 4627 10319;10320 10117;10118 10117 436 2235 2 NATLAWDSSHSSIQNSPK PHIKIEMKNATLAWDS SSIQNSPKLTPKMKKD K N A P K L 2 0 2 1 0 1 0 0 1 1 1 1 0 0 1 5 1 1 0 0 0 0 18 0 1941.9181 O15440 O15440 494 511 ABCC5 Multidrug resistance-associated protein 5 yes yes 3 0.023662 46.324 By matching By MS/MS 1 1 6612500 3364800 3247700 4054 1482 4628 10321;10322 10119 10119 2766;2767;2768 1 NCIVLIDSTPYR VRTKTLVKNCIVLIDS LIDSTPYRQWYESHYA K N C Y R Q 0 1 1 1 1 0 0 0 0 2 1 0 0 0 1 1 1 0 1 1 0 0 12 0 1449.7286 Q5JR95;P62241 Q5JR95 79 90 RPS8 40S ribosomal protein S8 yes no 2 0.003579 89.827 By matching By MS/MS 1 1 15067000 9221700 5845200 4055 1935 4629 10323;10324 10120 10120 1 NCLALGGSTSPTSVIK VIPDLNLRNCLALGGS TSPTSVIKFLLAGSKQ R N C I K F 1 0 1 0 1 0 0 2 0 1 2 1 0 0 1 3 2 0 0 1 0 0 16 0 1603.824 Q8NFU7 Q8NFU7 313 328 TET1 Methylcytosine dioxygenase TET1 yes yes 2 0.00040055 106.87 By MS/MS 1 9168000 9168000 0 4056 2519 4630 10325 10121;10122 10122 5147 2 NCNTPLLRAYYGSLEDK DPLKIAMKNCNTPLLR YYGSLEDKRFGIILEK K N C D K R 1 1 2 1 1 0 1 1 0 0 3 1 0 0 1 1 1 0 2 0 0 0 17 1 2012.9626 O15457 O15457 440 456 MSH4 MutS protein homolog 4 yes yes 3 0.031031 40.158 By matching By MS/MS 1 1 12949000 6317900 6630600 4057 1484 4631 10326;10327 10123 10123 1 NCPAVTLTSPAK DLPSPDSRNCPAVTLT VTLTSPAKTKILPPRK R N C A K T 2 0 1 0 1 0 0 0 0 0 1 1 0 0 2 1 2 0 0 1 0 0 12 0 1257.6387 Q9UGU0 Q9UGU0 1327 1338 TCF20 Transcription factor 20 yes yes 2 0.018927 66.393 By MS/MS By matching 1 1 26235000 12661000 13573000 4058 3001 4632 10328;10329 10124 10124 6313 1 NCPPSPLPLISK STNRQIQKNCPPSPLP SPLPLISKQSPQTSFP K N C S K Q 0 0 1 0 1 0 0 0 0 1 2 1 0 0 4 2 0 0 0 0 0 0 12 0 1321.7064 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 479 490 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.00092786 97.597 By MS/MS By MS/MS 1 1 41539000 21056000 20483000 4059 226 4633 10330;10331 10125;10126;10127;10128;10129;10130 10126 402 6 NCSGLEDPTFGYSTGQPCILLK QFKRSFLKNCSGLEDP GQPCILLKMNRIVGFR K N C L K M 0 0 1 1 2 1 1 3 0 1 3 1 0 1 2 2 2 0 1 0 0 0 22 0 2456.1352 B7ZKW0;Q9UN42 B7ZKW0 186 207 ATP1B4 Protein ATP1B4 yes no 3 0.027312 43.12 By MS/MS 1 2741800 0 2741800 4060 599 4634 10332 10131 10131 1089;1090 1 NCSVTGIDDLEQIPADTTDINHLETQPVSSK LPRLPNKRNCSVTGID ETQPVSSKDSGIGSVA R N C S K D 1 0 2 4 1 2 2 1 1 3 2 1 0 0 2 3 4 0 0 2 0 0 31 0 3396.5991 H0YCZ2;Q8NG31;E9PPJ1 H0YCZ2 707 737 CASC5 Protein CASC5 yes no 3 0.0048597 49.699 By MS/MS By MS/MS 1 1 35978000 14897000 21081000 4061 1171 4635 10333;10334 10132;10133 10132 2215 2 NDAPTPGTSTTPGLR KSNTPTPRNDAPTPGT TSTTPGLRSMPGKPPG R N D L R S 1 1 1 1 0 0 0 2 0 0 1 0 0 0 3 1 4 0 0 0 0 0 15 0 1483.7267 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 324 338 TLE3 Transducin-like enhancer protein 3 yes no 2 0.00055189 108.66 By MS/MS By MS/MS 2 2 67099000 37305000 29795000 4062 986 4636 10335;10336;10337;10338 10134;10135;10136 10134 1850;7141;7142 2 NDEELNKLLGK RHLQLAIRNDEELNKL ELNKLLGKVTIAQGGV R N D G K V 0 0 2 1 0 0 2 1 0 0 3 2 0 0 0 0 0 0 0 0 0 0 11 1 1271.6721 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;P20671;P0C0S8;H0YFX9;Q16777;Q6FI13 A0A0U1RR32 90 100 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST1H2AD;HIST1H2AG;HIST2H2AC;HIST2H2AA3 Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 1-D;Histone H2A type 1;Histone H2A;Histone H2A type 2-C;Histone H2A type 2-A yes no 2;3 0.0022175 108.47 By MS/MS By MS/MS 1 1 0 0 0 4063 394 4637 10339;10340 10137;10138 10138 2 NDGLLALSSPDAEEPQLPDGTGR RPQGRSGRNDGLLALS QLPDGTGREGPAAARG R N D G R E 2 1 1 3 0 1 2 3 0 0 4 0 0 0 3 2 1 0 0 0 0 0 23 0 2351.1241 F1T0I1;Q8N9G1 F1T0I1 2245 2267 SEC16A yes no 2;3 2.0611E-08 134.29 By MS/MS By MS/MS 2 2 30692000 15171000 15521000 4064 930 4638 10341;10342;10343;10344 10139;10140;10141 10140 1741;1742 3 NDHLTSTTSSPGVIVPESSENK GLSKRKHRNDHLTSTT VPESSENKNLGGVTQE R N D N K N 0 0 2 1 0 0 2 1 1 1 1 1 0 0 2 5 3 0 0 2 0 0 22 0 2298.0975 H7C608;E2QRF9;O75496 H7C608 55 76 GMNN Geminin yes no 2;3 0.0016307 63.703 By MS/MS By MS/MS 2 1 43819000 31295000 12524000 4065 773 4639 10345;10346;10347 10142;10143;10144 10144 1383;1384;1385 3 NDISPPGR QFDASTPKNDISPPGR NDISPPGRFFSSQIPS K N D G R F 0 1 1 1 0 0 0 1 0 1 0 0 0 0 2 1 0 0 0 0 0 0 8 0 854.42463 B5MDQ0;Q2NKX8 B5MDQ0 943 950 ERCC6L DNA excision repair protein ERCC-6-like yes no 2 0.012716 82.261 By MS/MS By matching 1 1 32578000 16525000 16054000 4066 582 4640 10348;10349 10145 10145 1065 1 NDKSEEEQSSSSVK QSKQAEMKNDKSEEEQ EQSSSSVKKDETNVKM K N D V K K 0 0 1 1 0 1 3 0 0 0 0 2 0 0 0 5 0 0 0 1 0 0 14 1 1552.6853 G3V2Q1;P07910;G3V5V7;G3V4C1;B2R5W2;G3V2D6;G3V4W0;B4DY08 G3V4C1 229 242 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 no no 2 8.6161E-11 141.06 By MS/MS By MS/MS 2 1 210850000 24960000 185890000 4067 1069;1079 4641 10350;10351;10352 10146;10147;10148;10149 10149 2025;2026 4 NDLQDTEISPR EAWEASHKNDLQDTEI QDTEISPRQNRRTRAA K N D P R Q 0 1 1 2 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1286.6103 Q9NS91 Q9NS91 463 473 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 2 6.6662E-06 140.33 By MS/MS By MS/MS 2 2 318030000 154250000 163780000 4068 2913 4642;4643 10353;10354;10355;10356 10150;10151;10152;10153 10151 168 6144;7877 4 NDQDTWDYTNPNLSGQGDPGSNPNKR PTRLNVFKNDQDTWDY PGSNPNKRQRQPPLLG K N D K R Q 0 1 5 4 0 2 0 3 0 0 1 1 0 0 3 2 2 1 1 0 0 0 26 1 2889.255 M0QXS5;P14866 M0QXS5 219 244 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3 0.018268 83.245 By matching By MS/MS 1 1 14100000 5109200 8990500 4069 1403 4644 10357;10358 10154 10154 1 NDQEPPPEALDFSDDEKEK KGSDASWKNDQEPPPE FSDDEKEKEAKQRKKS K N D E K E 1 0 1 4 0 1 4 0 0 0 1 2 0 1 3 1 0 0 0 0 0 0 19 1 2201.9601 Q96HR8 Q96HR8 303 321 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes yes 2;3 1.1364E-06 133.21 By MS/MS By MS/MS 2 2 193900000 97636000 96260000 4070 2665 4645 10359;10360;10361;10362 10155;10156;10157;10158;10159;10160;10161 10155 5494 7 NDREYDSGDTDEIIAMK DSDDDIMRNDREYDSG TDEIIAMKKNVAKVKN R N D M K K 1 1 1 4 0 0 2 1 0 2 0 1 1 0 0 1 1 0 1 0 0 0 17 1 1970.8528 F8WE42;F5H101;Q76FK4;F5GWN9 F8WE42 372 388 NOL8 Nucleolar protein 8 yes no 2 0.015744 69.258 By MS/MS By matching 1 1 13761000 7168500 6592500 4071 957 4646 10363;10364 10162 10162 1802;7130 1 NDSDLFGLGLEEAGPKESSEEGKEGK PLPAFRLKNDSDLFGL SEEGKEGKTPSKEKKK K N D G K T 1 0 1 2 0 0 6 5 0 0 3 3 0 1 1 3 0 0 0 0 0 0 26 2 2721.2617 H0Y4Z8;Q3YEC7;A0A0X1KG72 H0Y4Z8 624 649 RABL6 Rab-like protein 6 yes no 3 0.00018965 76.744 By matching By MS/MS 1 1 37663000 19421000 18241000 4072 1124 4647 10365;10366 10163 10163 2135;2136 1 NDSGEENVPLDLTR KNLRVRGRNDSGEENV NVPLDLTREPSDNLRE R N D T R E 0 1 2 2 0 0 2 1 0 0 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1557.7271 Q6R327 Q6R327 19 32 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2 0.0066882 77.324 By MS/MS By MS/MS 1 1 6751900 3144200 3607700 4073 2333 4648 10367;10368 10164;10165 10164 4713 2 NDSLVTPSPQQAR RQNGQLVRNDSLVTPS TPSPQQARVCPPHMLP R N D A R V 1 1 1 1 0 2 0 0 0 0 1 0 0 0 2 2 1 0 0 1 0 0 13 0 1411.7056 H7C433;A0A0A0MS29;E9PQX8 H7C433 27 39 MFF yes no 2 0.00030054 116.79 By MS/MS By matching 1 1 18500000 7793700 10706000 4074 238 4649 10369;10370 10166 10166 417 1 NDSPTQIPVSSDVCR TLSASGARNDSPTQIP PVSSDVCRLTPA____ R N D C R L 0 1 1 2 1 1 0 0 0 1 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1673.7679 Q8TC07 Q8TC07 673 687 TBC1D15 TBC1 domain family member 15 yes yes 2 0.00082662 95.236 By MS/MS By MS/MS 1 1 167650000 84039000 83612000 4075 2535 4650 10371;10372 10167;10168 10168 5177 2 NDSVIVADQTPTPTR TLKFGPARNDSVIVAD DQTPTPTRFLKNCEEV R N D T R F 1 1 1 2 0 1 0 0 0 1 0 0 0 0 2 1 3 0 0 2 0 0 15 0 1612.8057 E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336 E9PEK8 60 74 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes no 2 1.7984E-54 195.17 By MS/MS By MS/MS 3 2 103650000 53771000 49875000 4076 607 4651;4652 10373;10374;10375;10376;10377 10169;10170;10171;10172;10173 10173 7004;7005 4 NDSWGSFDLR RYQRGLERNDSWGSFD SWGSFDLRAAIVYHTK R N D L R A 0 1 1 2 0 0 0 1 0 0 1 0 0 1 0 2 0 1 0 0 0 0 10 0 1195.5258 Q7Z417 Q7Z417 650 659 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.00017889 120.59 By MS/MS By MS/MS 1 1 424160000 257540000 166620000 4077 2380 4653 10378;10379 10174;10175 10174 4834 2 NEALAALLR FADIELSRNEALAALL EALAALLRDGETLEEL R N E L R D 3 1 1 0 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 9 0 969.56073 A0A0A0MSQ0;P13797 A0A0A0MSQ0 226 234 PLS3 Plastin-3 yes no 2 0.0081622 107.9 By MS/MS By MS/MS 1 1 2028900 0 2028900 4078 255 4654 10380;10381 10176;10177;10178 10178 3 NEEDEGHSNSSPR GAKIDASKNEEDEGHS GHSNSSPRHSEAATAQ K N E P R H 0 1 2 1 0 0 3 1 1 0 0 0 0 0 1 3 0 0 0 0 0 0 13 0 1456.5815 D6RAF8;Q14103;D6RD83 D6RAF8 73 85 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 1.1042E-12 153.41 By MS/MS By MS/MS 1 1 70143000 46304000 23839000 4079 741 4655 10382;10383 10179;10180 10179 1340;1341;1342 2 NEEENIYSVPHDSTQGK MDAVVKPRNEEENIYS PHDSTQGKIITIRNIN R N E G K I 0 0 2 1 0 1 3 1 1 1 0 1 0 0 1 2 1 0 1 1 0 0 17 0 1945.8654 Q9NRY4 Q9NRY4 1099 1115 ARHGAP35 Rho GTPase-activating protein 35 yes yes 3 4.1441E-05 119.54 By MS/MS By MS/MS 1 1 42413000 21202000 21211000 4080 2911 4656 10384;10385 10181;10182 10181 8471 2 NEEPSEEEIDAPKPK SKTKKVTKNEEPSEEE EIDAPKPKKMKKEKEM K N E P K K 1 0 1 1 0 0 5 0 0 1 0 2 0 0 3 1 0 0 0 0 0 0 15 1 1710.7948 Q9NR30 Q9NR30 117 131 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 2.7581E-10 139.46 By MS/MS By MS/MS 2 2 627910000 291060000 336850000 4081 2905 4657 10386;10387;10388;10389 10183;10184;10185;10186;10187;10188;10189;10190;10191;10192 10183 6123 10 NEEPVRSPERR FRQRISTKNEEPVRSP PVRSPERRDRKASANA K N E R R D 0 3 1 0 0 0 3 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 11 2 1367.6906 Q92922 Q92922 304 314 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3 0.032055 59.898 By MS/MS By matching 1 1 26479000 10996000 15483000 4082 2611 4658 10390;10391 10193 10193 1 NEEYFMFPEPK YTPKSAVKNEEYFMFP YFMFPEPKTPVNKNQH K N E P K T 0 0 1 0 0 0 3 0 0 0 0 1 1 2 2 0 0 0 1 0 0 0 11 0 1429.6224 Q14680 Q14680 435 445 MELK Maternal embryonic leucine zipper kinase yes yes 2 0.00063608 105.17 By MS/MS By MS/MS 1 1 3231700 0 3231700 4083 2101 4659 10392;10393 10194;10195 10195 838 8342 2 NEGVVGGEDYEEVDR YAPRHSRRNEGVVGGE EDYEEVDRYSRQGRVA R N E D R Y 0 1 1 2 0 0 4 3 0 0 0 0 0 0 0 0 0 0 1 3 0 0 15 0 1665.7118 H3BQQ2;Q86UK7 H3BQQ2 242 256 ZNF598 Zinc finger protein 598 yes no 2 0.0075989 78.705 By MS/MS By matching 1 1 23285000 10658000 12627000 4084 1243 4660 10394;10395 10196 10196 8160 1 NEIIQSPISQVPSVEK NETGDITRNEIIQSPI SQVPSVEKLSMNTGNE R N E E K L 0 0 1 0 0 2 2 0 0 3 0 1 0 0 2 3 0 0 0 2 0 0 16 0 1766.9414 Q7Z3T8 Q7Z3T8 934 949 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 2 4.2598E-10 135.29 By MS/MS By MS/MS 3 3 127180000 67949000 59234000 4085 2378 4661;4662 10396;10397;10398;10399;10400;10401 10197;10198;10199;10200;10201;10202 10198 4829;4830 4 NELQEPCDSPK NIMLNIVKNELQEPCD QEPCDSPKVKEERIDT K N E P K V 0 0 1 1 1 1 2 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 11 0 1315.5714 O94913 O94913 1512 1522 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 2 0.024871 61.56 By matching By MS/MS 1 1 13859000 7312400 6546100 4086 1576 4663 10402;10403 10203 10203 2986 1 NEMKKSVHTQVNTNTTLPK ATSVVPKKNEMKKSVH NTNTTLPKSPQPSVPE K N E P K S 0 0 3 0 0 1 1 0 1 0 1 3 1 0 1 1 4 0 0 2 0 0 19 2 2169.1212 Q5FWF5 Q5FWF5 260 278 ESCO1 N-acetyltransferase ESCO1 yes yes 2 0.019208 55.261 By MS/MS By matching 1 1 13589000 6395000 7193600 4087 2213 4664 10404;10405 10204 10204 885 1 NENTEGSPQEDGVELEGLK KKNKKKIKNENTEGSP GVELEGLKQRLEKKQK K N E L K Q 0 0 2 1 0 1 5 3 0 0 2 1 0 0 1 1 1 0 0 1 0 0 19 0 2043.9233 P11388 P11388 1241 1259 TOP2A DNA topoisomerase 2-alpha yes yes 2;3 0.00038177 104.84 By MS/MS By MS/MS 2 2 64336000 27950000 36386000 4088 1682 4665 10406;10407;10408;10409 10205;10206;10207;10208 10205 3174;7387 4 NEQTLRAAQMFPSESK PNKAFELKNEQTLRAA QMFPSESKQKDDEENS K N E S K Q 2 1 1 0 0 2 2 0 0 0 1 1 1 1 1 2 1 0 0 0 0 0 16 1 1835.8836 Q9BXX2 Q9BXX2 551 566 ANKRD30B Ankyrin repeat domain-containing protein 30B yes yes 2 0.026742 78.508 By MS/MS 1 18375000 0 18375000 4089 2776 4666 10410 10209 10209 5776;5777 0 NESLTATDGLR NLSCALRRNESLTATD LTATDGLRGVRRNSSF R N E L R G 1 1 1 1 0 0 1 1 0 0 2 0 0 0 0 1 2 0 0 0 0 0 11 0 1175.5782 H0Y507;Q5TCZ1 H0Y507 927 937 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.0021261 89.189 By MS/MS By MS/MS 1 1 11618000 6477100 5141300 4090 1125 4667 10411;10412 10210;10211 10211 2141 2 NETEDQYALMEDEDDLPHHEER INEWLGIKNETEDQYA DLPHHEERTWYVGKIN K N E E R T 1 1 1 4 0 1 6 0 2 0 2 0 1 0 1 0 1 0 1 0 0 0 22 0 2714.1038 O00459 O00459 599 620 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta yes yes 3 0.027159 50.226 By MS/MS 1 0 0 0 4091 1437 4668 10413 10212 10212 506 1 NEVNGTSEDIKSEGDTQSN ESKESDTKNEVNGTSE SEGDTQSN________ K N E S N - 0 0 3 2 0 1 3 2 0 1 0 1 0 0 0 3 2 0 0 1 0 0 19 1 2022.8614 O95232 O95232 414 432 LUC7L3 Luc7-like protein 3 yes yes 2 7.9917E-16 150.69 By MS/MS By MS/MS 3 5 100910000 46492000 54419000 4092 1583 4669;4670 10414;10415;10416;10417;10418;10419;10420;10421 10213;10214;10215;10216;10217;10218 10214 63;64 2998;2999;7354 5 NEVYETFSYPESYSPTLPVSR LKLQKMKKNEVYETFS SPTLPVSRRENNSPSN K N E S R R 0 1 1 0 0 0 3 0 0 0 1 0 0 1 3 4 2 0 3 2 0 0 21 0 2464.1434 Q5H966;Q9UN30 Q5H966 98 118 SCML1 Sex comb on midleg-like protein 1 yes no 2 0.0069148 64.394 By MS/MS 1 10437000 10437000 0 4093 2214 4671 10422 10219 10219 4427;4428;8364 1 NFDEILR LYPATTGRNFDEILRV RNFDEILRVVISLQLT R N F L R V 0 1 1 1 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 7 0 905.46068 P30041 P30041 156 162 PRDX6 Peroxiredoxin-6 yes yes 2 0.01778 97.602 By MS/MS 1 0 0 0 4094 1777 4672 10423 10220 10220 1 NFDFEGSLSPVIAPK TDRLAWTRNFDFEGSL LSPVIAPKKARPSETG R N F P K K 1 0 1 1 0 0 1 1 0 1 1 1 0 2 2 2 0 0 0 1 0 0 15 0 1619.8195 Q9H1A4;H0Y564 Q9H1A4 680 694 ANAPC1 Anaphase-promoting complex subunit 1 yes no 2 1.9447E-150 249.86 By matching By MS/MS 1 1 100720000 53412000 47306000 4095 2814 4673 10424;10425 10221 10221 5884 1 NFGIGQDIQPK PLFEKRPKNFGIGQDI IGQDIQPKRDLTRFVK K N F P K R 0 0 1 1 0 2 0 2 0 2 0 1 0 1 1 0 0 0 0 0 0 0 11 0 1215.6248 Q5T8U3;P62424 Q5T8U3 65 75 RPL7A 60S ribosomal protein L7a yes no 2 0.018131 76.221 By MS/MS 1 7644000 7644000 0 4096 1942 4674 10426 10222 10222 1 NFIGNSNHGSQSPR DAYFTEIRNFIGNSNH NHGSQSPRNVEERMNG R N F P R N 0 1 3 0 0 1 0 2 1 1 0 0 0 1 1 3 0 0 0 0 0 0 14 0 1513.7022 E7EUL6;A0A0C3SFZ7;E7EQ57;Q03112 E7EUL6 840 853 MECOM MDS1 and EVI1 complex locus protein EVI1 yes no 2;3 0.0029944 80.507 By MS/MS By MS/MS 2 2 34535000 20341000 14193000 4097 293 4675 10427;10428;10429;10430 10223;10224;10225 10225 519;520 3 NFILDQTNVSAAAQR EIAARKKRNFILDQTN NVSAAAQRRKMCLFAG R N F Q R R 3 1 2 1 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 15 0 1646.8376 Q00839 Q00839 576 590 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 8.5764E-12 144.28 By MS/MS By MS/MS 1 1 14000000 7873100 6127300 4098 1976 4676 10431;10432 10226;10227 10226 2 NFSDNQLQEGK KKSKENPRNFSDNQLQ DNQLQEGKNVIGLQMG R N F G K N 0 0 2 1 0 2 1 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1278.584 P37802;X6RJP6 P37802 161 171 TAGLN2 Transgelin-2 yes no 2 5.6562E-10 160.56 By MS/MS By MS/MS 1 1 50956000 22995000 27961000 4099 1805 4677 10433;10434 10228;10229 10228 3411 2 NFTEVDPIK N F I K 0 0 1 1 0 0 1 0 0 1 0 1 0 1 1 0 1 0 0 1 0 0 9 0 1061.5393 REV__Q8NE28 yes yes 2 0.011689 97.163 By MS/MS 1 3527200 3527200 0 + 4100 3218 4678 10435 10230 10230 7967 1 NFTKPQDGDVIAPLITPQKK FVQWCADRNFTKPQDG PLITPQKKEWNDSTSV R N F K K E 1 0 1 2 0 2 0 1 0 2 1 3 0 1 3 0 2 0 0 1 0 0 20 2 2209.2107 Q9Y3Z3 Q9Y3Z3 577 596 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 3;4 0.00062778 89.859 By MS/MS By MS/MS 2 2 143200000 76680000 66524000 4101 3114 4679 10436;10437;10438;10439 10231;10232;10233;10234;10235 10234 7949 5 NFVFHTLSPVK PSAPRNSRNFVFHTLS FHTLSPVKAEAAKESS R N F V K A 0 0 1 0 0 0 0 0 1 0 1 1 0 2 1 1 1 0 0 2 0 0 11 0 1287.6976 Q9HAW4;E7ESG2 Q9HAW4 1282 1292 CLSPN Claspin yes no 2 1.3223E-14 171.62 By MS/MS By MS/MS 1 1 20009000 12531000 7478700 4102 2861 4680 10440;10441 10236;10237 10236 6025;7860 2 NFVFHTLSPVKAEAAK PSAPRNSRNFVFHTLS PVKAEAAKESSKSQVK R N F A K E 3 0 1 0 0 0 1 0 1 0 1 2 0 2 1 1 1 0 0 2 0 0 16 1 1757.9465 Q9HAW4;E7ESG2 Q9HAW4 1282 1297 CLSPN Claspin yes no 2;3 5.161E-09 139 By MS/MS By MS/MS 2 2 48039000 28669000 19370000 4103 2861 4681 10442;10443;10444;10445 10238;10239;10240;10241 10241 6025;7860 4 NFYESDDDQKEK DELEDNGKNFYESDDD SDDDQKEKTDKKKKPY K N F E K T 0 0 1 3 0 1 2 0 0 0 0 2 0 1 0 1 0 0 1 0 0 0 12 1 1516.6318 O00203 O00203 272 283 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.0021567 95.183 By MS/MS By MS/MS 1 1 48362000 26894000 21468000 4104 1429 4682 10446;10447 10242;10243 10243 2625 2 NGAAGPHSPDPLLDEQAFGDLTDLPVVPK TEEAVPRRNGAAGPHS TDLPVVPKATYGLKHA R N G P K A 3 0 1 4 0 1 1 3 1 0 4 1 0 1 5 1 1 0 0 2 0 0 29 0 2969.4771 Q9H3Q1 Q9H3Q1 167 195 CDC42EP4 Cdc42 effector protein 4 yes yes 3 6.2034E-07 80.722 By MS/MS By MS/MS 2 2 45158000 24923000 20235000 4105 2828 4683;4684 10448;10449;10450;10451 10244;10245;10246;10247 10245 134 5933 4 NGAKMSENKR PIKVTWLKNGAKMSEN AKMSENKRIEVLSNGS K N G K R I 1 1 2 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 0 0 0 0 10 2 1133.5611 Q2VWP7;H0YLT7 Q2VWP7 75 84 PRTG Protogenin yes no 2 0.029087 53.493 By MS/MS 1 1759400 0 1759400 4106 2184 4685 10452 10248 10248 873 1 NGDSLQLSNAEAMLILCQAESR TTGHYTIKNGDSLQLS ILCQAESRAVVYSNTR K N G S R A 3 1 2 1 1 2 2 1 0 1 4 0 1 0 0 3 0 0 0 0 0 0 22 0 2419.1472 P48553 P48553 817 838 TRAPPC10 Trafficking protein particle complex subunit 10 yes yes 2 0.024997 44.089 By MS/MS 1 3627600 3627600 0 4107 1845 4686 10453 10249 10249 714 3534 1 NGDVSQFPYVEFTGR EVHNEDGRNGDVSQFP PYVEFTGRDSVTCPTC R N G G R D 0 1 1 1 0 1 1 2 0 0 0 0 0 2 1 1 1 0 1 2 0 0 15 0 1714.7951 F2Z3N7;C9JZ87;Q9NUM4 F2Z3N7 42 56 TMEM106B Transmembrane protein 106B yes no 2 0.006467 89.747 By MS/MS By MS/MS 1 1 13508000 7090300 6417800 4108 704 4687 10454;10455 10250;10251 10251 25 8101 2 NGEPCTQTVNLRDCEYCQYHVQAQYKK GTCKAKKKNGEPCTQT HVQAQYKKLSAKRADL K N G K K L 1 1 2 1 3 4 2 1 1 0 1 2 0 0 1 0 2 0 3 2 0 0 27 2 3388.5023 Q5T670;Q7L590 Q5T670 395 421 MCM10 Protein MCM10 homolog yes no 3 0.02101 40.285 By MS/MS 1 2757700 0 2757700 4109 2244 4688 10456 10252 10252 1 NGFPHPEPDCNPSEAASEESNSEIEQEIPVEQK REKSPKLKNGFPHPEP QEIPVEQKEGAFSNFP K N G Q K E 2 0 3 1 1 2 8 1 1 2 0 1 0 1 5 4 0 0 0 1 0 0 33 0 3693.6013 Q9NR30 Q9NR30 152 184 DDX21 Nucleolar RNA helicase 2 yes yes 3 1.5937E-06 71.118 By MS/MS By MS/MS 3 2 148720000 69590000 79133000 4110 2905 4689;4690;4691 10457;10458;10459;10460;10461 10253;10254;10255;10256;10257;10258;10259 10254 135 6119;6120;6121;6122 7 NGGEDTDNEEGEEENPLEIK LNLDSEDKNGGEDTDN EENPLEIKEKPEEAGH K N G I K E 0 0 3 2 0 0 7 3 0 1 1 1 0 0 1 0 1 0 0 0 0 0 20 0 2216.9193 Q9NU22 Q9NU22 4893 4912 MDN1 Midasin yes yes 2 1.0254E-56 186.29 By MS/MS By MS/MS 2 1 72720000 40665000 32055000 4111 2920 4692;4693 10462;10463;10464 10260;10261;10262 10261 136 7882 3 NGILAIEGTGSDVDDDMSGDEKQDNESNVDPR LYMIPSIRNGILAIEG NESNVDPRDDVFGYPQ R N G P R D 1 1 3 7 0 1 3 4 0 2 1 1 1 0 1 3 1 0 0 2 0 0 32 1 3391.4594 Q93008 Q93008 1583 1614 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes yes 3 0.010074 49.087 By MS/MS By matching 1 1 73085000 33839000 39246000 4112 2614 4694 10465;10466 10263 10263 1048 5378 1 NGILASPQSAPGNLDNSK SDPHLLERNGILASPQ PGNLDNSKSGEIKGNG R N G S K S 2 0 3 1 0 1 0 2 0 1 2 1 0 0 2 3 0 0 0 0 0 0 18 0 1781.8908 C9JRP1 C9JRP1 250 267 SLC4A7 Anion exchange protein yes yes 2 2.4845E-06 129.43 By MS/MS By MS/MS 3 3 138680000 64153000 74527000 4113 690 4695;4696 10467;10468;10469;10470;10471;10472 10264;10265;10266;10267;10268;10269 10265 24 1275;1276 4 NGLTSTYAGIR LYRHRKKRNGLTSTYA TSTYAGIRKVPSFTFT R N G I R K 1 1 1 0 0 0 0 2 0 1 1 0 0 0 0 1 2 0 1 0 0 0 11 0 1151.5935 A0A0A0MSX4;Q9Y6N7;A0A087WZ85;A0A087WTM1 A0A0A0MSX4 806 816 ROBO1 Roundabout homolog 1 yes no 2 0.00022829 117.53 By MS/MS By MS/MS 1 1 40412000 20273000 20139000 4114 262 4697 10473;10474 10270;10271;10272 10272 8018 3 NGPLNESQEDEEDSEHGTSLNR KILFQETRNGPLNESQ EHGTSLNREMDSLGSN R N G N R E 0 1 3 2 0 1 5 2 1 0 2 0 0 0 1 3 1 0 0 0 0 0 22 0 2456.0324 Q9H2K8 Q9H2K8 318 339 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 3 0.00012304 83.423 By MS/MS By MS/MS 1 1 38488000 16088000 22400000 4115 2821 4698 10475;10476 10273;10274;10275 10275 5908 3 NGPSSSPFSSPASSR GISQLWKRNGPSSSPF FSSPASSRSQTPERPA R N G S R S 1 1 1 0 0 0 0 1 0 0 0 0 0 1 3 7 0 0 0 0 0 0 15 0 1463.6641 A0A087WY75;A0A075B7F8;A8CG34;A6NF01;C9JFL1;Q96HA1 Q96HA1 430 444 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 no no 2 0.017692 65.467 By matching By MS/MS 1 1 11021000 6817000 4204000 4116 2660;24 4699 10477;10478 10276 10276 46 1 NGQDLGVAFK EVELSYAKNGQDLGVA QDLGVAFKISKEVLAG K N G F K I 1 0 1 1 0 1 0 2 0 0 1 1 0 1 0 0 0 0 0 1 0 0 10 0 1047.5349 Q00839;Q5RI18 Q00839 424 433 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 2 0.00042014 124.08 By MS/MS By MS/MS 1 1 22073000 9243100 12830000 4117 1976 4700 10479;10480 10277;10278 10277 97;159 2 NGQRGFVPGSYLEK DGWWTVERNGQRGFVP VPGSYLEKL_______ R N G E K L 0 1 1 0 0 1 1 3 0 0 1 1 0 1 1 1 0 0 1 1 0 0 14 1 1550.7841 H0YKF1;J3KPG6;O43586 H0YKF1 119 132 PSTPIP1 Proline-serine-threonine phosphatase-interacting protein 1 yes no 3 0.028328 42.257 By MS/MS 1 89175000 0 89175000 4118 1201 4701 10481 10279 10279 2244 1 NGSEADIDEGLYSR VPTNGMAKNGSEADID IDEGLYSRQLYVLGHE K N G S R Q 1 1 1 2 0 0 2 2 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1524.6692 P22314;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3;Q5JRS2 P22314 44 57 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 4.4005E-16 147.58 By MS/MS By MS/MS 3 3 43030000 19640000 23390000 4119 1747 4702;4703;4704 10482;10483;10484;10485;10486;10487 10280;10281;10282;10283;10284;10285;10286;10287 10282 74 3288;3289;8243 8 NGSLDSPGKQDTEEDEEEDEKDK ENHEAQLKNGSLDSPG EEEDEKDKGKLKPNLG K N G D K G 0 0 1 5 0 1 6 2 0 0 1 3 0 0 1 2 1 0 0 0 0 0 23 2 2593.0787 A0A0A0MSS4;A0A0A0MSU9;Q9Y266 A0A0A0MSS4 85 107 NUDC Nuclear migration protein nudC yes no 3 1.9535E-05 101 By MS/MS By MS/MS 2 2 50691000 23717000 26974000 4120 258 4705;4706 10488;10489;10490;10491 10288;10289;10290;10291 10289 10 449 4 NGSLTNHFSFEK QINGSVLKNGSLTNHF TNHFSFEKKKARVAVL K N G E K K 0 0 2 0 0 0 1 1 1 0 1 1 0 2 0 2 1 0 0 0 0 0 12 0 1379.647 A0A140TA71;P22102 A0A140TA71 58 69 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 2 0.00080459 100.4 By MS/MS By MS/MS 2 2 41243000 21559000 19684000 4121 408 4707;4708 10492;10493;10494;10495 10292;10293;10294;10295 10294 16 750 4 NGSPNKQPSSEPEWTPEPR FNISSWDKNGSPNKQP PEWTPEPRSSSSQHPE K N G P R S 0 1 2 0 0 1 3 1 0 0 0 1 0 0 5 3 1 1 0 0 0 0 19 1 2135.9872 Q5JSZ5 Q5JSZ5 905 923 PRRC2B Protein PRRC2B yes yes 3 0.0018679 72.772 By MS/MS By MS/MS 2 2 24583000 12366000 12217000 4122 2220 4709;4710 10496;10497;10498;10499 10296;10297;10298 10298 111 4444;4445 3 NGSTAVAESVASPQK KPATGERKNGSTAVAE ESVASPQKTMSVLSCI K N G Q K T 3 0 1 0 0 1 1 1 0 0 0 1 0 0 1 3 1 0 0 2 0 0 15 0 1444.7158 Q12888;A6NNK5;C9JXV0 Q12888 1017 1031 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 8.2371E-07 125.96 By MS/MS 1 13795000 0 13795000 4123 2031 4711 10500 10299 10299 101 3954 1 NGTLILSPVDIK IGQVGKFKNGTLILSP ILSPVDIKKINSSRVA K N G I K K 0 0 1 1 0 0 0 1 0 2 2 1 0 0 1 1 1 0 0 1 0 0 12 0 1268.734 Q5TBI2;Q8NDD1 Q5TBI2 236 247 C1orf131 Uncharacterized protein C1orf131 yes no 2 1.8219E-09 139.48 By MS/MS By MS/MS 2 2 20706000 11057000 9648800 4124 2252 4712;4713 10501;10502;10503;10504 10300;10301;10302;10303 10300 112 4507 4 NGTSGSDSPGQAVEAEEIVK NFFSPANKNGTSGSDS VEAEEIVKQLDMEQVD K N G V K Q 2 0 1 1 0 1 3 3 0 1 0 1 0 0 1 3 1 0 0 2 0 0 20 0 1973.9178 Q05D32 Q05D32 158 177 CTDSPL2 CTD small phosphatase-like protein 2 yes yes 2 0.00063066 93.255 By MS/MS 1 6472000 0 6472000 4125 2005 4714 10505 10304 10304 100 3868 0 NGVAAEVSPAKEENPR DYFGPPAKNGVAAEVS PAKEENPRRASKAVEE K N G P R R 3 1 2 0 0 0 3 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 16 1 1666.8275 Q9BW71 Q9BW71 118 133 HIRIP3 HIRA-interacting protein 3 yes yes 2;3 0.000809 105.2 By MS/MS By MS/MS 4 5 153530000 81710000 71823000 4126 2760 4715;4716 10506;10507;10508;10509;10510;10511;10512;10513;10514 10305;10306;10307;10308;10309;10310 10305 130 5750 5 NGVITQYSVAYEAVDGEDRGR VPPPADSRNGVITQYS VDGEDRGRHVVDGISR R N G G R H 2 2 1 2 0 1 2 3 0 1 0 0 0 0 0 1 1 0 2 3 0 0 21 1 2298.0877 H0Y6Z7;P10586 H0Y6Z7 293 313 PTPRF Receptor-type tyrosine-protein phosphatase F yes no 2 0.029908 45.864 By MS/MS 1 0 0 0 4127 1137 4717 10515 10311 10311 1 NHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVK PTLETANKNHETDGGS LPDKIEVKTGEEDEEE K N H V K T 1 0 1 7 0 0 3 4 3 1 1 2 0 1 4 1 1 0 0 3 0 0 33 1 3537.592 P49792 P49792 1153 1185 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 4 0.0012542 51.975 By MS/MS By MS/MS 1 1 177270000 83937000 93334000 4128 1860 4718 10516;10517 10312;10313 10312 3606 2 NHLLQFALESPAK VKSLNFARNHLLQFAL FALESPAKSPASSSSK R N H A K S 2 0 1 0 0 1 1 0 1 0 3 1 0 1 1 1 0 0 0 0 0 0 13 0 1466.7882 Q9NS91;F8WE49 Q9NS91 90 102 RAD18 E3 ubiquitin-protein ligase RAD18 yes no 2 1.1014E-09 135.91 By MS/MS By MS/MS 1 1 9654500 5319100 4335500 4129 2913 4719 10518;10519 10314;10315;10316 10316 6146 3 NHLLQFALESPAKSPASSSSK VKSLNFARNHLLQFAL SPASSSSKNLAVKVYT R N H S K N 3 0 1 0 0 1 1 0 1 0 3 2 0 1 2 6 0 0 0 0 0 0 21 1 2198.1331 Q9NS91;F8WE49 Q9NS91 90 110 RAD18 E3 ubiquitin-protein ligase RAD18 yes no 3 0.00097498 70.094 By MS/MS By MS/MS 3 3 64980000 33532000 31448000 4130 2913 4720;4721 10520;10521;10522;10523;10524;10525 10317;10318;10319;10320 10317 6146;6147;6148 3 NHLSPQQGGATPQVPSPCCR RRGLAHPKNHLSPQQG QVPSPCCRFDSPRGPP K N H C R F 1 1 1 0 2 3 0 2 1 0 1 0 0 0 4 2 1 0 0 1 0 0 20 0 2190.0059 A0A087X0R7;Q9H4L4 A0A087X0R7 96 115 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 0.0014942 108.38 By MS/MS By MS/MS 2 2 72582000 24822000 47759000 4131 161 4722;4723 10526;10527;10528;10529 10321;10322;10323;10324 10324 262;263 4 NHSDSSTSESEVSSVSPLK NLQQNEEKNHSDSSTS VSSVSPLKNKHPDEDA K N H L K N 0 0 1 1 0 0 2 0 1 0 1 1 0 0 1 8 1 0 0 2 0 0 19 0 1975.8971 Q9NY27;H7C559;C9IZ04 Q9NY27 211 229 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 2;3 1.9823E-33 169.33 By MS/MS By MS/MS 2 2 108960000 62575000 46386000 4132 2944 4724 10530;10531;10532;10533 10325;10326;10327;10328 10326 6200;6201 4 NHSDSSTSESEVSSVSPLKNK NLQQNEEKNHSDSSTS SVSPLKNKHPDEDAVE K N H N K H 0 0 2 1 0 0 2 0 1 0 1 2 0 0 1 8 1 0 0 2 0 0 21 1 2218.0349 Q9NY27;H7C559;C9IZ04 Q9NY27 211 231 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 3 0.021148 47.729 By MS/MS By matching 1 1 10256000 5516400 4739800 4133 2944 4725 10534;10535 10329 10329 6200;6201 1 NHSGSRTPPVALNSSR SATPPATRNHSGSRTP PVALNSSRMSCFSRPS R N H S R M 1 2 2 0 0 0 0 1 1 0 1 0 0 0 2 4 1 0 0 1 0 0 16 1 1678.8499 Q9UQ35 Q9UQ35 2098 2113 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.0031508 70.98 By MS/MS By MS/MS 3 3 252070000 140590000 111480000 4134 3074 4726;4727;4728 10536;10537;10538;10539;10540;10541 10330;10331;10332;10333 10331 6537;6538 4 NHSNAQFIESYVCR KMTMRLRRNHSNAQFI FIESYVCRMCSRGDED R N H C R M 1 1 2 0 1 1 1 0 1 1 0 0 0 1 0 2 0 0 1 1 0 0 14 0 1723.7737 P41229 P41229 315 328 KDM5C Lysine-specific demethylase 5C yes yes 3 0.00049571 87.863 By MS/MS 1 3513800 3513800 0 4135 1820 4729 10542 10334 10334 3429 1 NHSVNEEEQEEQGEGSEDEWEQVGPR LTISNGPKNHSVNEEE EWEQVGPRNKTSVTRQ K N H P R N 0 1 2 1 0 3 9 3 1 0 0 0 0 0 1 2 0 1 0 2 0 0 26 0 3026.2398 Q14694;H3BNA1 Q14694 561 586 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 3 0.028286 49.266 By MS/MS 1 0 0 0 4136 2106 4730 10543 10335 10335 4165 1 NIEDVIAQGIGK VISELNGKNIEDVIAQ VIAQGIGKLASVPAGG K N I G K L 1 0 1 1 0 1 1 2 0 3 0 1 0 0 0 0 0 0 0 1 0 0 12 0 1255.6772 P05387;H0YDD8 P05387 50 61 RPLP2 60S acidic ribosomal protein P2 yes no 2 8.392E-11 149.94 By MS/MS By MS/MS 1 1 30054000 13671000 16382000 4137 1641 4731 10544;10545 10336;10337;10338 10336 3 NIGNGIISSPLTGK VIPDHSKKNIGNGIIS ISSPLTGKRQDSGTMK K N I G K R 0 0 2 0 0 0 0 3 0 3 1 1 0 0 1 2 1 0 0 0 0 0 14 0 1369.7565 A0A075B784;Q9P275;K7EMM6;E9PEW0 A0A075B784 456 469 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.0095464 73.666 By matching By MS/MS 1 1 6023600 3643700 2379900 4138 19 4732 10546;10547 10339;10340;10341 10341 37 3 NIIGSSPVADFSAIK SDRASLQKNIIGSSPV VADFSAIKELDTLNNE K N I I K E 2 0 1 1 0 0 0 1 0 3 0 1 0 1 1 3 0 0 0 1 0 0 15 0 1517.809 B1AUU8;P42566 B1AUU8 319 333 EPS15 Epidermal growth factor receptor substrate 15 yes no 2 0.00088255 107.63 By MS/MS By MS/MS 1 1 8084500 8084500 0 4139 533 4733 10548;10549 10342;10343 10342 1004 2 NIIHGSDSVK DFCIQVGRNIIHGSDS IHGSDSVKSAEKEISL R N I V K S 0 0 1 1 0 0 0 1 1 2 0 1 0 0 0 2 0 0 0 1 0 0 10 0 1068.5564 Q32Q12;P22392;O60361 Q32Q12 255 264 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 2 0.00044673 128.21 By MS/MS By MS/MS 2 2 50024000 28384000 21640000 4140 1748 4734 10550;10551;10552;10553 10344;10345;10346 10346 3295;3296 3 NIISPPWDFR VHTMKTLKNIISPPWD ISPPWDFREFEVEKQT K N I F R E 0 1 1 1 0 0 0 0 0 2 0 0 0 1 2 1 0 1 0 0 0 0 10 0 1243.635 Q5T8C6;Q13042 Q5T8C6 412 421 CDC16 Cell division cycle protein 16 homolog yes no 2 0.0031549 94.402 By MS/MS By MS/MS 1 1 21114000 13525000 7589800 4141 2037 4735 10554;10555 10347;10348 10347 4002 2 NILSSADYVER EMINRIEKNILSSADY SSADYVERGQEHVKTA K N I E R G 1 1 1 1 0 0 1 0 0 1 1 0 0 0 0 2 0 0 1 1 0 0 11 0 1265.6252 Q12846 Q12846 244 254 STX4 Syntaxin-4 yes yes 2 0.0070032 83.869 By MS/MS By matching 1 1 8014700 3796300 4218400 4142 2028 4736 10556;10557 10349;10350;10351 10351 8325 3 NINIYTYDDMEVK SCFYPEPRNINIYTYD TYDDMEVKQINKRASG R N I V K Q 0 0 2 2 0 0 1 0 0 2 0 1 1 0 0 0 1 0 2 1 0 0 13 0 1616.7392 E5RGX5;Q93045 E5RGX5 20 32 STMN2 Stathmin;Stathmin-2 yes no 2 0.030279 58.487 By MS/MS 1 23338000 23338000 0 4143 779 4737 10558 10352 10352 1 NINMDNDLEVLTSSPTR STEEVDMKNINMDNDL VLTSSPTRNLNGAYLT K N I T R N 0 1 3 2 0 0 1 0 0 1 2 0 1 0 1 2 2 0 0 1 0 0 17 0 1917.9102 Q9Y5T5 Q9Y5T5 539 555 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 2;3 3.278E-07 131.45 By MS/MS By MS/MS 2 2 68549000 38031000 30518000 4144 3135 4738 10559;10560;10561;10562 10353;10354;10355 10355 1245 6716 2 NINSINFDNPVYQK LWKNWRLKNINSINFD FDNPVYQKTTEDEVHI K N I Q K T 0 0 4 1 0 1 0 0 0 2 0 1 0 1 1 1 0 0 1 1 0 0 14 0 1664.8158 J3KMZ9;P01130 J3KMZ9 902 915 LDLR Low-density lipoprotein receptor yes no 2 2.7826E-20 156.01 By MS/MS By MS/MS 1 1 11201000 4282900 6918400 4145 1317 4739 10563;10564 10356;10357;10358 10357 8165 3 NINTFVETPVQK KPAVSDEKNINTFVET FVETPVQKLDLLGNLP K N I Q K L 0 0 2 0 0 1 1 0 0 1 0 1 0 1 1 0 2 0 0 2 0 0 12 0 1388.73 P46013 P46013 2399 2410 MKI67 Antigen KI-67 yes yes 2 0.0048507 88.092 By MS/MS By MS/MS 1 1 12676000 6933100 5743200 4146 1833 4740 10565;10566 10359;10360 10359 7446 2 NIPGITLLNVSK NGIIKAFRNIPGITLL ITLLNVSKLNILKLAP R N I S K L 0 0 2 0 0 0 0 1 0 2 2 1 0 0 1 1 1 0 0 1 0 0 12 0 1267.75 H3BM89;P36578 H3BM89 129 140 RPL4 60S ribosomal protein L4 yes no 2 0.024192 72.652 By MS/MS By MS/MS 1 1 10368000 6594900 3772900 4147 1225 4741 10567;10568 10361;10362 10361 2 NIPSPGQLDPDTR DIETPPTRNIPSPGQL GQLDPDTRIPVINLED R N I T R I 0 1 1 2 0 1 0 1 0 1 1 0 0 0 3 1 1 0 0 0 0 0 13 0 1408.6947 Q9P2D1 Q9P2D1 2556 2568 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 2 0.008604 75.566 By MS/MS 1 30181000 30181000 0 4148 2978 4742 10569 10363;10364 10364 6271 2 NIPSPGQLDPDTRIPVINLEDGTR DIETPPTRNIPSPGQL INLEDGTRLVGEDAPK R N I T R L 0 2 2 3 0 1 1 2 0 3 2 0 0 0 4 1 2 0 0 1 0 0 24 1 2616.3507 Q9P2D1 Q9P2D1 2556 2579 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 3 0.019862 45.363 By matching By MS/MS 1 1 22349000 10376000 11973000 4149 2978 4743 10570;10571 10365 10365 6271 1 NISGKQSSLPAMSK FMVFQVFRNISGKQSS SSLPAMSKVRRLHYEG R N I S K V 1 0 1 0 0 1 0 1 0 1 1 2 1 0 1 4 0 0 0 0 0 0 14 1 1446.7501 Q5T9L3 Q5T9L3 406 419 WLS Protein wntless homolog yes yes 2 0.018148 48.391 By MS/MS 1 3282600 3282600 0 4150 2249 4744 10572 10366 10366 4502;4503;4504 1 NISQDMTQTSGTNLTSEELR LSMQGSSRNISQDMTQ NLTSEELRKRREAYFE R N I L R K 0 1 2 1 0 2 2 1 0 1 2 0 1 0 0 3 4 0 0 0 0 0 20 0 2224.0278 G3V2G2;G3V2G1;G3V3T6;G3V328;G3V4U9;C9JQV6;D3VVH9;A0A0A0MS38;A0A087X1A8;G3V3R7;F5H211;P54252 G3V2G2 84 103 ATXN3 Ataxin-3 yes no 2 0.0011448 70.072 By matching By MS/MS 1 1 11469000 5620500 5848600 4151 164 4745 10573;10574 10367 10367 71 268 1 NISSSPSVESLPGGR DLQGLSSKNISSSPSV VESLPGGREFTGSPPS K N I G R E 0 1 1 0 0 0 1 2 0 1 1 0 0 0 2 5 0 0 0 1 0 0 15 0 1485.7423 C9J3F6;Q92609 C9J3F6 509 523 TBC1D5 TBC1 domain family member 5 yes no 2 0.002406 79.92 By MS/MS By MS/MS 1 1 22755000 12931000 9824100 4152 631 4746 10575;10576 10368;10369 10369 1179;1180;1181 2 NITLDDASAPR DRLVNRLKNITLDDAS LDDASAPRLMVLRQPR K N I P R L 2 1 1 2 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1171.5833 E9PLT0;O75534 E9PLT0 629 639 CSDE1 Cold shock domain-containing protein E1 yes no 2 0.0051708 94.122 By MS/MS By MS/MS 1 1 11631000 5941100 5689600 4153 907 4747 10577;10578 10370;10371 10370 7121 2 NIYVLQELDNPGAK DKNSVNFKNIYVLQEL ELDNPGAKRILELDQF K N I A K R 1 0 2 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 14 0 1572.8148 B1AHC9;P12956 B1AHC9 51 64 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.0024946 123.62 By MS/MS By matching 1 1 9172400 4967200 4205200 4154 518 4748 10579;10580 10372 10372 1 NKDQGTYEDYVEGLR PMLQTVAKNKDQGTYE EDYVEGLRVFDKEGNG K N K L R V 0 1 1 2 0 1 2 2 0 0 1 1 0 0 0 0 1 0 2 1 0 0 15 1 1785.817 G8JLA2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;F8VZU9;G3V1Y7;F8VPF3;F8W180 G8JLA2 81 95 MYL6 Myosin light polypeptide 6 yes no 2;3 0.00078109 88.021 By MS/MS By MS/MS 2 2 26232000 13018000 13214000 4155 1107 4749 10581;10582;10583;10584 10373;10374;10375;10376 10375 8147 4 NKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSR DRFRFEKRNKIEEAPE NAEGEVSRANTPDSDI R N K S R A 4 1 2 0 0 2 8 2 0 2 1 1 0 0 6 6 1 0 0 1 0 0 37 1 3860.8188 D6RAY8;Q9H4L7;F8W9M2 D6RAY8 15 51 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 7.1293E-05 60.181 By MS/MS 1 23393000 23393000 0 4156 747 4750 10585 10377 10377 1356;1357;1358 1 NKKSPEIHR GTEQEAAKNKKSPEIH KKSPEIHRRIDISPST K N K H R R 0 1 1 0 0 0 1 0 1 1 0 2 0 0 1 1 0 0 0 0 0 0 9 2 1107.6149 Q9Y2W1 Q9Y2W1 669 677 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0084527 81.676 By MS/MS By MS/MS 1 1 64075000 40599000 23476000 4157 3096 4751 10586;10587 10378;10379 10379 6651 2 NKPGPNIESGNEDDDASFK KGQKKNQKNKPGPNIE EDDDASFKIKTVAQKK K N K F K I 1 0 3 3 0 0 2 2 0 1 0 2 0 1 2 2 0 0 0 0 0 0 19 1 2032.8974 A0A087WUT6;O60841 A0A087WUT6 206 224 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 1.2861E-15 148.85 By MS/MS By MS/MS 2 2 1412100000 744850000 667250000 4158 60 4752 10588;10589;10590;10591 10380;10381;10382;10383;10384 10384 106 5 NKPLSPIK NEENTKTKNKPLSPIK NKPLSPIKLTPTSVLD K N K I K L 0 0 1 0 0 0 0 0 0 1 1 2 0 0 2 1 0 0 0 0 0 0 8 1 895.5491 P35251;D6RAD2 P35251 152 159 RFC1 Replication factor C subunit 1 yes no 2 0.029533 77.192 By MS/MS 1 33265000 0 33265000 4159 1793 4753 10592 10385 10385 3386 1 NKPLSPIKLTPTSVLDYFGTGSVQR NEENTKTKNKPLSPIK FGTGSVQRSNKKMVAS K N K Q R S 0 1 1 1 0 1 0 2 0 1 3 2 0 1 3 3 3 0 1 2 0 0 25 2 2717.4752 P35251 P35251 152 176 RFC1 Replication factor C subunit 1 yes yes 3 1.0272E-14 142.45 By MS/MS By MS/MS 1 2 55482000 11885000 43597000 4160 1793 4754;4755 10593;10594;10595 10386;10387;10388 10388 3386;7430 3 NKPSLASESNLLQQR SLLAEAQKNKPSLASE ESNLLQQRESGLSSSS K N K Q R E 1 1 2 0 0 2 1 0 0 0 3 1 0 0 1 3 0 0 0 0 0 0 15 1 1683.8904 U3KQ39;E9PK14;Q96JE7 U3KQ39 213 227 SEC16B Protein transport protein Sec16B yes no 2 0.024098 52.008 By MS/MS By matching 1 1 31779000 17966000 13813000 4161 893 4756 10596;10597 10389 10389 1672;1673 0 NKPYISWPSSGGSEPSVTVPLR LARQPPSRNKPYISWP PSVTVPLRSMSDPDQD R N K L R S 0 1 1 0 0 0 1 2 0 1 1 1 0 0 4 5 1 1 1 2 0 0 22 1 2357.2016 Q9Y5S2 Q9Y5S2 1635 1656 CDC42BPB Serine/threonine-protein kinase MRCK beta yes yes 3 8.7622E-05 94.564 By MS/MS By MS/MS 1 1 11925000 8522100 3402700 4162 3133 4757 10598;10599 10390;10391;10392 10391 6712;8512 3 NKQDDDLNCEPLSPHNITPEPVSK CILSVNVKNKQDDDLN ITPEPVSKLPAEPVSG K N K S K L 0 0 3 3 1 1 2 0 1 1 2 2 0 0 4 2 1 0 0 1 0 0 24 1 2746.2868 Q6VMQ6;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9 Q6VMQ6 101 124 ATF7IP Activating transcription factor 7-interacting protein 1 yes no 3 0.00046375 71.946 By MS/MS By MS/MS 1 1 75559000 36719000 38840000 4163 2341 4758 10600;10601 10393;10394 10394 4731 2 NKQYDMHTEVTTLK LEEEEIAKNKQYDMHT HTEVTTLKQEKNPVPS K N K L K Q 0 0 1 1 0 1 1 0 1 0 1 2 1 0 0 0 3 0 1 1 0 0 14 1 1706.8298 H0YAT7 H0YAT7 108 121 DST yes yes 2 0.029504 48.112 By MS/MS 1 0 0 0 4164 1158 4759 10602 10395 10395 419 1 NKSNESVDIQDQEEK KKRSGKWKNKSNESVD DIQDQEEKVVKQECIK K N K E K V 0 0 2 2 0 2 3 0 0 1 0 2 0 0 0 2 0 0 0 1 0 0 15 1 1761.8017 Q5UIP0 Q5UIP0 1574 1588 RIF1 Telomere-associated protein RIF1 yes yes 2 1.5133E-06 126.42 By MS/MS By MS/MS 1 1 29958000 19268000 10690000 4165 2261 4760 10603;10604 10396;10397 10397 4527 2 NKSQRLEGHDQVSDDYM SLPPNSDRNKSQRLEG DQVSDDYM________ R N K Y M - 0 1 1 3 0 2 1 1 1 0 1 1 1 0 0 2 0 0 1 1 0 0 17 2 2020.8909 Q9Y5F3 Q9Y5F3 802 818 PCDHB1 Protocadherin beta-1 yes yes 2 0.025913 59.155 By MS/MS 1 0 0 0 4166 3127 4761 10605 10398 10398 6699;6700 1 NKTSTTSSMVASAEQPR RPIKGILKNKTSTTSS VASAEQPRGNVDEELS K N K P R G 2 1 1 0 0 1 1 0 0 0 0 1 1 0 1 4 3 0 0 1 0 0 17 1 1793.8578 E7EMN6;G1AUC5;Q6NXS1;P41236;E7EUI7 E7EMN6 17 33 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 yes no 3 0.0019412 73.593 By MS/MS By matching 1 1 8617700 4337600 4280000 4167 792 4762 10606;10607 10399 10399 1410;7066;7067 1 NKVSSGLNENLTVNGGGWNEKSVK SFPVGSKKNKVSSGLN GWNEKSVKLSSQISAG K N K V K L 0 0 5 0 0 0 2 4 0 0 2 3 0 0 0 3 1 1 0 3 0 0 24 2 2530.2776 H0YB56 H0YB56 152 175 MTDH yes yes 2 0.016953 43.658 By MS/MS By matching 1 1 20386000 10291000 10095000 4168 1161 4763 10608;10609 10400 10400 2205 1 NLALSRESLVV SRERRLKKNLALSRES LSRESLVV________ K N L V V - 1 1 1 0 0 0 1 0 0 0 3 0 0 0 0 2 0 0 0 2 0 0 11 1 1199.6874 S4R3V8;Q86X29 S4R3V8 591 601 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.0039517 91.961 By MS/MS By MS/MS 1 1 16914000 10304000 6609800 4169 2416 4764 10610;10611 10401;10402;10403 10402 4932;4933 3 NLANTVTEEILEK KVKVLFVRNLANTVTE VTEEILEKAFSQFGKL R N L E K A 1 0 2 0 0 0 3 0 0 1 2 1 0 0 0 0 2 0 0 1 0 0 13 0 1472.7722 B7Z645;O60506 B7Z645 246 258 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 2 1.8808E-06 129.89 By MS/MS By MS/MS 1 1 8786900 2701200 6085700 4170 590 4765 10612;10613 10404;10405 10405 1 NLASPEGTLATLGLK THPLLIRRNLASPEGT TLATLGLKTEKNFVDK R N L L K T 2 0 1 0 0 0 1 2 0 0 4 1 0 0 1 1 2 0 0 0 0 0 15 0 1483.8246 Q8TDJ6 Q8TDJ6 1854 1868 DMXL2 DmX-like protein 2 yes yes 2 0.030099 81.992 By MS/MS 1 0 0 0 4171 2540 4766 10614 10406 10406 1 NLATSADTPPSTVPGTGK NARKLIQKNLATSADT STVPGTGKSVACSPKK K N L G K S 2 0 1 1 0 0 0 2 0 0 1 1 0 0 3 2 4 0 0 1 0 0 18 0 1712.8581 J3KRA9;Q96Q15 J3KRA9 3456 3473 SMG1 Serine/threonine-protein kinase SMG1 yes no 2 0.016233 61.423 By MS/MS 1 4466700 0 4466700 4172 1332 4767 10615 10407 10407 2468 1 NLATTVTEEILEK KVKVLFVRNLATTVTE VTEEILEKSFSEFGKL R N L E K S 1 0 1 0 0 0 3 0 0 1 2 1 0 0 0 0 3 0 0 1 0 0 13 0 1459.777 B4DT28;O43390 B4DT28 208 220 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 2 1.4496E-09 139.31 By MS/MS 1 4211700 0 4211700 4173 560 4768 10616 10408 10408 1 NLDFQDVLDK LSRAKSRRNLDFQDVL DFQDVLDKLADMGIAI R N L D K L 0 0 1 3 0 1 0 0 0 0 2 1 0 1 0 0 0 0 0 1 0 0 10 0 1205.5928 Q9Y3I0 Q9Y3I0 442 451 RTCB tRNA-splicing ligase RtcB homolog yes yes 2 0.0071345 94.409 By MS/MS By matching 1 1 7130800 4287300 2843400 4174 3108 4769 10617;10618 10409 10409 1 NLDLKGDLYMAGLAQGMYSNLPK TQVINGAKNLDLKGDL GMYSNLPKLVASRDGF K N L P K L 2 0 2 2 0 1 0 3 0 0 5 2 2 0 1 1 0 0 2 0 0 0 23 1 2511.2502 A0A0A0MR89;A0A0U1RRJ0;A0A0U1RQC5;Q9Y4C0 A0A0A0MR89 746 768 NRXN3 Neurexin-3 yes no 3 0.022835 58.339 By MS/MS 1 0 0 0 4175 202 4770 10619 10410 10410 86 1 NLDPDPEPPSPDSPTETFAAPAEVR KRGRPMTKNLDPDPEP FAAPAEVRHFTDGSFP K N L V R H 3 1 1 3 0 0 3 0 0 0 1 0 0 1 7 2 2 0 0 1 0 0 25 0 2648.2242 Q9BUA3;H0YGY5 Q9BUA3 239 263 C11orf84 Uncharacterized protein C11orf84 yes no 2;3 4.0646E-11 134.42 By MS/MS By MS/MS 4 5 120710000 55543000 65171000 4176 2754 4771;4772 10620;10621;10622;10623;10624;10625;10626;10627;10628 10411;10412;10413;10414;10415;10416;10417;10418 10412 5729;5730;7827 8 NLEELNISSAQ SETTQLSKNLEELNIS ELNISSAQ________ K N L A Q - 1 0 2 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 11 0 1216.5935 I3L0E3;Q9Y2R5 I3L0E3 215 225 hCG_1984214;MRPS17 28S ribosomal protein S17, mitochondrial yes no 2 0.010475 101.46 By MS/MS By MS/MS 1 1 0 0 0 4177 1300 4773 10629;10630 10419;10420 10419 2414;2415 2 NLEQILNGGESPK PNGSVETKNLEQILNG LNGGESPKQKGQEIKR K N L P K Q 0 0 2 0 0 1 2 2 0 1 2 1 0 0 1 1 0 0 0 0 0 0 13 0 1397.7151 G3V340;Q13033;G3V3G7 G3V340 219 231 STRN3 Striatin-3 yes no 2 3.0862E-21 161.82 By MS/MS By MS/MS 3 2 47025000 28643000 18381000 4178 1071 4774;4775 10631;10632;10633;10634;10635 10421;10422;10423;10424;10425 10423 48 2029 4 NLEQILNGGESPKQK PNGSVETKNLEQILNG GGESPKQKGQEIKRSS K N L Q K G 0 0 2 0 0 2 2 2 0 1 2 2 0 0 1 1 0 0 0 0 0 0 15 1 1653.8686 G3V340;Q13033 G3V340 219 233 STRN3 Striatin-3 yes no 2;3 5.5981E-26 170.48 By MS/MS By MS/MS 4 4 90054000 48680000 41374000 4179 1071 4776;4777 10636;10637;10638;10639;10640;10641;10642;10643 10426;10427;10428;10429;10430;10431;10432 10428 48 2029 7 NLESHLMSPAEIPGQPVPK PSQPKVSRNLESHLMS IPGQPVPKNILQELLG R N L P K N 1 0 1 0 0 1 2 1 1 1 2 1 1 0 4 2 0 0 0 1 0 0 19 0 2043.0459 Q9NRA8;B0QYZ7 Q9NRA8 506 524 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 3 0.00034806 85.7 By MS/MS By MS/MS 1 1 16887000 8989900 7897400 4180 2906 4778 10644;10645 10433;10434;10435 10433 1151 6128 3 NLETLPSFSSDEEDSVAK RLDEELKRNLETLPSF DEEDSVAKNRDLQESI R N L A K N 1 0 1 2 0 0 3 0 0 0 2 1 0 1 1 4 1 0 0 1 0 0 18 0 1966.9007 Q9ULL5 Q9ULL5 552 569 PRR12 Proline-rich protein 12 yes yes 2 3.595E-23 156.17 By MS/MS By MS/MS 1 1 61152000 28239000 32913000 4181 3045 4779 10646;10647 10436;10437 10436 6418;6419 2 NLFNQELLSPSKR QEVTKVRRNLFNQELL ELLSPSKRSLKRGLPR R N L K R S 0 1 2 0 0 1 1 0 0 0 3 1 0 1 1 2 0 0 0 0 0 0 13 1 1544.8311 Q7Z2Z1 Q7Z2Z1 915 927 TICRR Treslin yes yes 2;3 7.9895E-10 139.6 By MS/MS By matching 2 1 22283000 13718000 8564700 4182 2373 4780 10648;10649;10650 10438;10439 10438 4810 2 NLGSGSPKPR EEVPAFFKNLGSGSPK GSGSPKPRQKFCGMFC K N L P R Q 0 1 1 0 0 0 0 2 0 0 1 1 0 0 2 2 0 0 0 0 0 0 10 1 1011.5461 A0A1C7CYX9 A0A1C7CYX9 22 31 yes yes 2 0.010752 81.709 By MS/MS By matching 1 1 11769000 6074700 5694400 4183 435 4781 10651;10652 10440 10440 813 1 NLGSINTELQDVQR YIDSRARRNLGSINTE TELQDVQRIMVANIEE R N L Q R I 0 1 2 1 0 2 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1585.806 A0A087X1A9;O75396 A0A087X1A9 9 22 SEC22B Vesicle-trafficking protein SEC22b yes no 2 4.4305E-16 147.53 By MS/MS By MS/MS 1 1 70555000 28524000 42031000 4184 165 4782 10653;10654 10441;10442 10442 269 2 NLITDICTEQCTLSDQLLPKHCAKTISQAVNK DEMAKQARNLITDICT TISQAVNKKSKKQTGK R N L N K K 2 0 2 2 3 3 1 0 1 3 4 3 0 0 1 2 4 0 0 1 0 0 32 2 3698.843 Q9Y2A7 Q9Y2A7 612 643 NCKAP1 Nck-associated protein 1 yes yes 4 0.027514 44.555 By MS/MS 1 27173000 27173000 0 4185 3086 4783 10655 10443 10443 6626 0 NLLDHLTRMR NAYDIPRRNLLDHLTR LDHLTRMRSNLLKSTR R N L M R S 0 2 1 1 0 0 0 0 1 0 3 0 1 0 0 0 1 0 0 0 0 0 10 1 1267.6819 G5E9X1;B3KQH5;Q9UL03 G5E9X1 235 244 INTS6 Integrator complex subunit 6 yes no 2 0.0079037 60.691 By matching By MS/MS 1 1 9841600 4815400 5026200 4186 537 4784 10656;10657 10444 10444 212 6987 1 NLLEDDSDEEEDFFLR GSVKSERRNLLEDDSD EEEDFFLRGPSGPRFG R N L L R G 0 1 1 4 0 0 4 0 0 0 3 0 0 2 0 1 0 0 0 0 0 0 16 0 1984.8538 O75379 O75379 24 39 VAMP4 Vesicle-associated membrane protein 4 yes yes 2 6.1779E-91 216 By MS/MS By MS/MS 1 1 323110000 178280000 144830000 4187 1541 4785 10658;10659 10445;10446 10445 2911 2 NLLLSTSEEQIEK YFSEQPLKNLLLSTSE TSEEQIEKCFIIENIS K N L E K C 0 0 1 0 0 1 3 0 0 1 3 1 0 0 0 2 1 0 0 0 0 0 13 0 1502.7828 P17181 P17181 489 501 IFNAR1 Interferon alpha/beta receptor 1 yes yes 2 0.0017066 93.348 By matching By MS/MS 1 1 16043000 10113000 5930400 4188 1713 4786 10660;10661 10447;10448 10448 3221;7400 2 NLLPAYRPNLSPPAEAGLALPPTGYR FNKILNSKNLLPAYRP ALPPTGYRCLECGDAF K N L Y R C 4 2 2 0 0 0 1 2 0 0 5 0 0 0 6 1 1 0 2 0 0 0 26 1 2747.4759 Q8N1G0;F8WCX2;H0Y5I5 Q8N1G0 509 534 ZNF687 Zinc finger protein 687 yes no 3 0.028951 51.857 By MS/MS 1 8856800 0 8856800 4189 2458 4787 10662 10449 10449 0 NLLRMKFMQR ERKTRLSKNLLRMKFM LRMKFMQRGLDSETKK K N L Q R G 0 2 1 0 0 1 0 0 0 0 2 1 2 1 0 0 0 0 0 0 0 0 10 2 1335.7268 Q99547;H3BNK8;H3BU96 Q99547 12 21 MPHOSPH6 M-phase phosphoprotein 6 yes no 2 0.012206 54.611 By MS/MS 1 4706800 4706800 0 4190 2723 4788 10663 10450 10450 1081 1 NLLSVAYK VELTVEERNLLSVAYK NLLSVAYKNVIGARRA R N L Y K N 1 0 1 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 8 0 906.51747 P31946;P31947;Q4VY20;A0A0J9YWZ2;B4DJF2;Q4VY19;I3L3T1;A0A0J9YWE8;A2IDB2;P27348;E9PG15;E7EX29;P63104;E7ESK7;E5RGE1;E5RIR4;E9PD24;E7EVZ2;P62258;K7EIT4;Q04917;P61981 P62258 43 50 YWHAB;SFN;YWHAE;YWHAH;YWHAQ;YWHAZ;YWHAG 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein theta;14-3-3 protein zeta/delta;14-3-3 protein epsilon;14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed no no 2 0.015345 87.323 By MS/MS By MS/MS 2 2 41864000 20806000 21058000 4191 1936;1786;1768;838;1932;2001 4789;4790 10664;10665;10666;10667 10451;10452;10453 10453 1565 3 NLNNSNLFSPVNR SIKKLVLKNLNNSNLF NLFSPVNRDSENLASP K N L N R D 0 1 5 0 0 0 0 0 0 0 2 0 0 1 1 2 0 0 0 1 0 0 13 0 1487.7481 P52948;H0YEN4 P52948 604 616 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 2;3 2.0638E-72 217.68 By MS/MS By MS/MS 2 3 266550000 139710000 126840000 4192 1893 4791;4792 10668;10669;10670;10671;10672 10454;10455;10456 10454 3666 3 NLQPLMRSPISR PPRPLIQRNLQPLMRS LMRSPISRQQDPLMIP R N L S R Q 0 2 1 0 0 1 0 0 0 1 2 0 1 0 2 2 0 0 0 0 0 0 12 1 1410.7766 Q7Z6E9;H3BSK8 Q7Z6E9 353 364 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2;3 0.0068361 79.986 By matching By MS/MS 2 2 106220000 47628000 58588000 4193 2393 4793 10673;10674;10675;10676 10457;10458 10457 968 4878 2 NLQSPTQFQTPR QNYQRIERNLQSPTQF PTQFQTPRSSAIRRSG R N L P R S 0 1 1 0 0 3 0 0 0 0 1 0 0 1 2 1 2 0 0 0 0 0 12 0 1415.7157 O75385 O75385 447 458 ULK1 Serine/threonine-protein kinase ULK1 yes yes 2 0.00042898 112.62 By MS/MS By MS/MS 1 1 24227000 13469000 10758000 4194 1543 4794 10677;10678 10459;10460 10459 2914 2 NLQTVNVDEN YVPVTTFKNLQTVNVD QTVNVDEN________ K N L E N - 0 0 3 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1144.536 P62899 P62899 116 125 RPL31 60S ribosomal protein L31 yes yes 2 1.1554E-33 191.17 By MS/MS By MS/MS 1 1 52111000 28415000 23696000 4195 1948 4795 10679;10680 10461;10462 10462 2 NLSALENYNFELVDGVK WHNGMSERNLSALENY FELVDGVKLKKDKLNT R N L V K L 1 0 3 1 0 0 2 1 0 0 3 1 0 1 0 1 0 0 1 2 0 0 17 0 1923.9578 Q5JWQ2;Q5JWQ6;E9PEP6;O14786 Q5JWQ2 74 90 NRP1 Neuropilin-1 yes no 2 1.4365E-09 118.16 By MS/MS 1 3281600 0 3281600 4196 859 4796 10681 10463 10463 8125 0 NLSDSEKELYIQHAK KTVKENWKNLSDSEKE ELYIQHAKEDETRYHN K N L A K E 1 0 1 1 0 1 2 0 1 1 2 2 0 0 0 2 0 0 1 0 0 0 15 1 1773.8897 Q00059 Q00059 191 205 TFAM Transcription factor A, mitochondrial yes yes 3 9.0329E-06 123.92 By MS/MS By matching 1 1 21189000 11060000 10129000 4197 1972 4797 10682;10683 10464 10464 3775 1 NLSESPVITK KTSTNSSKNLSESPVI SESPVITKAKEGCQSD K N L T K A 0 0 1 0 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 1 0 0 10 0 1086.5921 E7ETD6;Q12830;F5GXF5 E7ETD6 1088 1097 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.00042785 114.71 By MS/MS By MS/MS 1 1 27915000 14181000 13734000 4198 819 4798 10684;10685 10465;10466 10465 1485 2 NLSFEIK QIDKKLERNLSFEIKK RNLSFEIKKVPLQEGP R N L I K K 0 0 1 0 0 0 1 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 7 0 849.45962 Q05209 Q05209 433 439 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes yes 2 0.026464 81.525 By MS/MS By MS/MS 1 1 30770000 16097000 14673000 4199 2002 4799 10686;10687 10467;10468;10469 10469 3858 3 NLSFNELYPSGTLK QDSGEEARNLSFNELY LYPSGTLKLQYNFDTI R N L L K L 0 0 2 0 0 0 1 1 0 0 3 1 0 1 1 2 1 0 1 0 0 0 14 0 1581.8039 Q8WYP5 Q8WYP5 1539 1552 AHCTF1 Protein ELYS yes yes 2 7.1083E-130 238.65 By matching By MS/MS 1 1 39922000 20385000 19537000 4200 2575 4800 10688;10689 10470 10470 5280 1 NLSGSTLYPVSNIPR SPAVHRQRNLSGSTLY YPVSNIPRSNVTPFGS R N L P R S 0 1 2 0 0 0 0 1 0 1 2 0 0 0 2 3 1 0 1 1 0 0 15 0 1616.8522 H0YLX2;Q2KHR2 H0YLX2 1079 1093 RFX7 DNA-binding protein RFX7 yes no 2 0.00073042 109.14 By MS/MS 1 14453000 14453000 0 4201 1214 4801 10690 10471 10471 2259 1 NLSLSSSTPPLPSPGR ETPRLPQRNLSLSSST PPLPSPGRSGPLPPPP R N L G R S 0 1 1 0 0 0 0 1 0 0 3 0 0 0 4 5 1 0 0 0 0 0 16 0 1608.8471 E9PB87;O43516 E9PB87 338 353 WIPF1 WAS/WASL-interacting protein family member 1 yes no 2 0.0016272 89.261 By MS/MS By MS/MS 1 1 19157000 10178000 8978700 4202 844 4802 10691;10692 10472;10473 10473 1573 2 NLSNEELTK HSPVQMNRNLSNEELT LSNEELTKSKPSAPPN R N L T K S 0 0 2 0 0 0 2 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 9 0 1046.5244 Q0JRZ9 Q0JRZ9 401 409 FCHO2 F-BAR domain only protein 2 yes yes 2 0.024422 62.799 By matching By MS/MS 1 1 117130000 65215000 51919000 4203 2021 4803 10693;10694 10474 10474 3922 1 NLSPGAVESDVR DISGLRKKNLSPGAVE GAVESDVRGITGVDLF K N L V R G 1 1 1 1 0 0 1 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 12 0 1242.6204 P53621 P53621 171 182 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.00080933 101.43 By MS/MS By MS/MS 1 1 45550000 24514000 21036000 4204 1897 4804 10695;10696 10475;10476 10475 3675 2 NLSPSFSR LRLMGGFKNLSPSFSR NLSPSFSRPASTIARP K N L S R P 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 3 0 0 0 0 0 0 8 0 906.45593 Q1ED39;H3BNU8 Q1ED39 385 392 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.015483 77.533 By MS/MS By MS/MS 1 1 35312000 17128000 18184000 4205 2172 4805 10697;10698 10477;10478 10478 4320 2 NLSSDEATNPISR GEREISLKNLSSDEAT EATNPISRVLNGNQQV K N L S R V 1 1 2 1 0 0 1 0 0 1 1 0 0 0 1 3 1 0 0 0 0 0 13 0 1402.6688 Q7Z417 Q7Z417 110 122 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0004988 115.09 By MS/MS By MS/MS 1 1 52011000 28571000 23440000 4206 2380 4806 10699;10700 10479;10480 10479 4835 2 NLSSPFIFHEK QANDHHPRNLSSPFIF SPFIFHEKTSEF____ R N L E K T 0 0 1 0 0 0 1 0 1 1 1 1 0 2 1 2 0 0 0 0 0 0 11 0 1317.6717 P52569 P52569 644 654 SLC7A2 Cationic amino acid transporter 2 yes yes 2 0.00093265 107.39 By MS/MS By MS/MS 2 2 12630000 7308800 5321200 4207 1886 4807 10701;10702;10703;10704 10481;10482;10483 10483 3652;3653 3 NLTANDPSQEYVASEGEEDPEVEFLK LKRNVLGRNLTANDPS DPEVEFLKSLTTKQKQ R N L L K S 2 0 2 2 0 1 6 1 0 0 2 1 0 1 2 2 1 0 1 2 0 0 26 0 2909.3091 Q86X95 Q86X95 189 214 CIR1 Corepressor interacting with RBPJ 1 yes yes 3 5.2516E-07 113.19 By MS/MS By MS/MS 1 1 117850000 58079000 59768000 4208 2417 4808 10705;10706 10484;10485 10485 4934 2 NLVEEKSTIQSK ETYEKQLKNLVEEKST EKSTIQSKLSKTEEYS K N L S K L 0 0 1 0 0 1 2 0 0 1 1 2 0 0 0 2 1 0 0 1 0 0 12 1 1374.7355 E7EUS2;Q8TBZ0 E7EUS2 482 493 CCDC110 Coiled-coil domain-containing protein 110 yes no 2 0.018252 60.161 By MS/MS 1 0 0 0 4209 825 4809 10707 10486 10486 1522 1 NLVSPAMR LPSVEENKNLVSPAMR NLVSPAMREAPTSLSQ K N L M R E 1 1 1 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 0 1 0 0 8 0 886.46947 Q14686 Q14686 1478 1485 NCOA6 Nuclear receptor coactivator 6 yes yes 2 0.031073 45.158 By matching By MS/MS 1 1 18120000 9127300 8992300 4210 2103 4810 10708;10709 10487 10487 839 1 NLVSPAYCTQESR SDFITENRNLVSPAYC AYCTQESREEIPGGEA R N L S R E 1 1 1 0 1 1 1 0 0 0 1 0 0 0 1 2 1 0 1 1 0 0 13 0 1523.7038 Q9NUQ3 Q9NUQ3 94 106 TXLNG Gamma-taxilin yes yes 2 0.0011127 103.91 By MS/MS By MS/MS 1 1 25567000 14962000 10605000 4211 2921 4811 10710;10711 10488;10489 10488 6170;6171 2 NLVSPAYCTQESREEIPGGEAR SDFITENRNLVSPAYC EIPGGEARTDPPDGQQ R N L A R T 2 2 1 0 1 1 4 2 0 1 1 0 0 0 2 2 1 0 1 1 0 0 22 1 2462.1496 Q9NUQ3 Q9NUQ3 94 115 TXLNG Gamma-taxilin yes yes 3 0.0067052 54.74 By MS/MS By MS/MS 2 2 365830000 179940000 185880000 4212 2921 4812;4813 10712;10713;10714;10715 10490;10491;10492 10492 6170;6171 3 NLYAHIQK GHTEVPARNLYAHIQK NLYAHIQKLGQVPPGE R N L Q K L 1 0 1 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 985.53451 H0Y6Z7;P10586;H0Y380;H0Y4H1;H0Y7Z9 H0Y6Z7 1265 1272 PTPRF Receptor-type tyrosine-protein phosphatase F yes no 2 0.0087278 111.65 By MS/MS By MS/MS 1 1 53747000 30816000 22931000 4213 1137 4814 10716;10717 10493;10494 10494 8153 2 NLYSSNLYKEAWDR YDRTRNLKNLYSSNLY LYKEAWDRVKATSYIL K N L D R V 1 1 2 1 0 0 1 0 0 0 2 1 0 0 0 2 0 1 2 0 0 0 14 1 1757.8373 H0Y786;A0A087X1N7;P20929 H0Y786 1128 1141 NEB Nebulin yes no 3 0.028947 51.612 By MS/MS 1 0 0 0 4214 168 4815 10718 10495 10495 1 NMAPGAVCSPGESK WTPDLGLRNMAPGAVC VCSPGESKELGVGQMD R N M S K E 2 0 1 0 1 0 1 2 0 0 0 1 1 0 2 2 0 0 0 1 0 0 14 0 1403.6173 Q9C0C2 Q9C0C2 1289 1302 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0054961 66.436 By MS/MS By matching 1 1 13724000 6701600 7022100 4215 2791 4816 10719;10720 10496 10496 1105 5822 1 NMAPSQQSPVR DYVPSPTRNMAPSQQS PSQQSPVRTASVNQRN R N M V R T 1 1 1 0 0 2 0 0 0 0 0 0 1 0 2 2 0 0 0 1 0 0 11 0 1213.5874 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9 H7C3Q7 86 96 ABI2 Abl interactor 2 yes no 2 0.0055566 80.014 By MS/MS By matching 1 1 9967700 5203200 4764500 4216 306 4817 10721;10722 10497 10497 533 1 NMDDYEDFDEK EYQEKMGRNMDDYEDF DYEDFDEKHSIYPSEK R N M E K H 0 0 1 4 0 0 2 0 0 0 0 1 1 1 0 0 0 0 1 0 0 0 11 0 1419.5136 Q68DH5 Q68DH5 286 296 LMBRD2 LMBR1 domain-containing protein 2 yes yes 2 0.0035122 93.561 By MS/MS By MS/MS 2 2 8733000 5122500 3610500 4217 2293 4818;4819 10723;10724;10725;10726 10498;10499;10500;10501 10500 916 8374 4 NMGGPYGGGNYGPGGSGGSGGYGGR SGNFGGSRNMGGPYGG GSGGYGGRSRY_____ R N M G R S 0 1 2 0 0 0 0 14 0 0 0 0 1 0 2 2 0 0 3 0 0 0 25 0 2188.8981 P22626 P22626 326 350 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2;3 6.5622E-07 94.072 By MS/MS By MS/MS 2 2 36011000 13109000 22903000 4218 1749 4820 10727;10728;10729;10730 10502;10503;10504;10505;10506 10505 657 3298 5 NMMGTMIQKLQR GVLHVTKKNMMGTMIQ TMIQKLQRQRLRSRPQ K N M Q R Q 0 1 1 0 0 2 0 1 0 1 1 1 3 0 0 0 1 0 0 0 0 0 12 1 1449.7254 Q00653 Q00653 145 156 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes yes 2 0.030285 40.352 By MS/MS 1 0 0 0 4219 1975 4821 10731 10507 10507 779;780 1 NMMVTGQLGLTEIHKNPPTIHR QDSDYVLRNMMVTGQL KNPPTIHRKSCIFRDF R N M H R K 0 1 2 0 0 1 1 2 2 2 2 1 2 0 2 0 3 0 0 1 0 0 22 1 2486.2886 H0Y843;A4FU69 H0Y843 883 904 EFCAB5 EF-hand calcium-binding domain-containing protein 5 yes no 3 0.032031 40.047 By MS/MS 1 0 0 0 4220 460 4822 10732 10508 10508 176 1 NMTVEQLLTGSPTSPTVEPEKPTR IKILESLKNMTVEQLL VEPEKPTREKKFLDDI K N M T R E 0 1 1 0 0 1 3 1 0 0 2 1 1 0 4 2 5 0 0 2 0 0 24 1 2611.3163 Q9C0C9;K7ES11 Q9C0C9 826 849 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 3;4 1.0576E-36 165.03 By MS/MS By MS/MS 3 4 362520000 160350000 202160000 4221 2792 4823;4824;4825 10733;10734;10735;10736;10737;10738;10739 10509;10510;10511;10512;10513;10514;10515;10516 10510 1107 5832;5833;7840;7841;7842 8 NNASTDYDLSDK IKDGKLIKNNASTDYD TDYDLSDKSINPLGGF K N N D K S 1 0 2 3 0 0 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 0 12 0 1341.5685 B5MCW2;G5E9G0;P39023 B5MCW2 249 260 RPL3 60S ribosomal protein L3 yes no 2 0.0019925 97.597 By MS/MS By MS/MS 1 1 25723000 14664000 11059000 4222 578 4826 10740;10741 10517;10518 10517 2 NNDQPQSANANEPQDSTVNLQSPLK GKVNIPAKNNDQPQSA VNLQSPLKMTNSPVLP K N N L K M 2 0 5 2 0 4 1 0 0 0 2 1 0 0 3 3 1 0 0 1 0 0 25 0 2708.2638 P37275 P37275 658 682 ZEB1 Zinc finger E-box-binding homeobox 1 yes yes 3 0.0039539 53.589 By MS/MS 1 8939500 8939500 0 4223 1804 4827 10742 10519 10519 3410 1 NNMTASMFDLSMK EVDIQFMRNNMTASMF SMFDLSMKDKSRNPFG R N N M K D 1 0 2 1 0 0 0 0 0 0 1 1 3 1 0 2 1 0 0 0 0 0 13 0 1488.6411 Q6WKZ4;E7EX40;Q7L804 Q6WKZ4 151 163 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 no no 2 0.0013425 105.58 By MS/MS By MS/MS 1 1 10868000 5835000 5032900 4224 2346;2367 4828 10743;10744 10520;10521 10521 4759;4760 2 NNNPSPPPDSDLER KSRGRGRRNNNPSPPP PPDSDLERVFIWDLDE R N N E R V 0 1 3 2 0 0 1 0 0 0 1 0 0 0 4 2 0 0 0 0 0 0 14 0 1550.6961 E7EQM5;A6NCB9;F8WB53;Q99502 E7EQM5 276 289 EYA1 Eyes absent homolog;Eyes absent homolog 1 yes no 2 0.021966 63.864 By matching By MS/MS 1 1 16006000 9351700 6654300 4225 464 4829 10745;10746 10522 10522 859 1 NNQARTPAPSSAR ________________ TPAPSSARTSTSVRAS M N N A R T 3 2 2 0 0 1 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 0 13 1 1368.6858 C9IZ47;A0A087WYK0;P59797 C9IZ47 2 14 SELV Selenoprotein V yes no 2 0.028186 40.624 By MS/MS 1 6385300 6385300 0 4226 125 4830 10747 10523 10523 212 0 NNSFTAPSTVGKR TLQNHYYRNNSFTAPS APSTVGKRNLSPSQEE R N N K R N 1 1 2 0 0 0 0 1 0 0 0 1 0 1 1 2 2 0 0 1 0 0 13 1 1377.7001 O95453 O95453 555 567 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.017823 69.261 By MS/MS By matching 1 1 19296000 8963100 10333000 4227 1597 4831 10748;10749 10524 10524 3028 1 NNSGEEFDCAFR TGIKVWCRNNSGEEFD EEFDCAFRLAQEGIYT R N N F R L 1 1 2 1 1 0 2 1 0 0 0 0 0 2 0 1 0 0 0 0 0 0 12 0 1444.5677 Q08J23 Q08J23 591 602 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 2 0.010179 73.881 By matching By MS/MS 1 1 7309000 3604200 3704900 4228 2018 4832 10750;10751 10525 10525 3903 1 NNSPPTVGAFGHTR KNRQNAARNNSPPTVG VGAFGHTRCSAFPLEQ R N N T R C 1 1 2 0 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 14 0 1453.7062 Q86XL3;F5H1D4 Q86XL3 660 673 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes no 2;3 0.02379 62.69 By MS/MS 2 13338000 0 13338000 4229 2418 4833 10752;10753 10526;10527 10527 4936 2 NNSSSSFSPHFLGPGVGGAASK SWGSSRRRNNSSSSFS GVGGAASKGCLIRNTR R N N S K G 2 0 2 0 0 0 0 4 1 0 1 1 0 2 2 6 0 0 0 1 0 0 22 0 2103.9974 H7C1D0;H7C1W4;Q93075 H7C1D0 21 42 TATDN2 Putative deoxyribonuclease TATDN2 yes no 3 0.0013341 79.383 By MS/MS 1 0 0 0 4230 1277 4834 10754 10528 10528 2365;2366 1 NNSYTSYTMAICGMPLDSFR SGDKPLRRNNSYTSYT GMPLDSFRAKEGEQKG R N N F R A 1 1 2 1 1 0 0 1 0 1 1 0 2 1 1 3 2 0 2 0 0 0 20 0 2327.0021 Q8WUM9 Q8WUM9 415 434 SLC20A1 Sodium-dependent phosphate transporter 1 yes yes 2;3 6.12E-07 128.72 By MS/MS By MS/MS 2 1 52252000 31654000 20598000 4231 2557 4835 10755;10756;10757 10529;10530;10531 10529 1023;1024 5223;5224 2 NNYALNTTATYAEPYRPIQYR RSTLTYQRNNYALNTT PYRPIQYRVQECNYNR R N N Y R V 3 2 3 0 0 1 1 0 0 1 1 0 0 0 2 0 3 0 4 0 0 0 21 1 2518.2241 Q99569;A0A0D9SF60 Q99569 468 488 PKP4 Plakophilin-4 yes no 3 8.899E-05 99.569 By MS/MS By MS/MS 2 3 48266000 21652000 26614000 4232 2726 4836;4837;4838 10758;10759;10760;10761;10762 10532;10533;10534;10535;10536;10537 10532 7820;7821;8438;8439;8440 5 NPDDITNEEYGEFYK KTKPIWTRNPDDITNE EEYGEFYKSLTNDWED R N P Y K S 0 0 2 2 0 0 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1832.7741 P07900 P07900 300 314 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 3.4329E-196 270.93 By MS/MS By MS/MS 1 1 83742000 43152000 40590000 4233 1656 4839 10763;10764 10538;10539;10540 10538 3 NPDDITQEEYGEFYK KTKPIWTRNPDDITQE EEYGEFYKSLTNDWED R N P Y K S 0 0 1 2 0 1 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1846.7897 P08238 P08238 292 306 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 1.0912E-111 230.96 By MS/MS 1 40299000 40299000 0 4234 1658 4840 10765 10541 10541 1 NPEAALSPTFR DSGHLDLRNPEAALSP AALSPTFRSDSPVPTA R N P F R S 2 1 1 0 0 0 1 0 0 0 1 0 0 1 2 1 1 0 0 0 0 0 11 0 1201.6091 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 37 47 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes no 2 5.0769E-08 153.39 By MS/MS By MS/MS 1 1 107490000 57593000 49900000 4235 562 4841 10766;10767 10542;10543 10542 1039 2 NPEDKSPQLSLSPR LAGSPTPKNPEDKSPQ PQLSLSPRPASPKAQW K N P P R P 0 1 1 1 0 1 1 0 0 0 2 1 0 0 3 3 0 0 0 0 0 0 14 1 1566.8002 B9EGQ5;M0QXA7;O95785 B9EGQ5 182 195 WIZ Protein Wiz yes no 2 0.021157 71.354 By MS/MS 1 4176400 4176400 0 4236 612 4842 10768 10544 10544 1108;1109;1110 1 NPEDKSPQLSLSPRPASPK LAGSPTPKNPEDKSPQ SPRPASPKAQWPQSED K N P P K A 1 1 1 1 0 1 1 0 0 0 2 2 0 0 5 4 0 0 0 0 0 0 19 2 2047.0698 B9EGQ5;M0QXA7;O95785 B9EGQ5 182 200 WIZ Protein Wiz yes no 3 0.00011718 119.25 By MS/MS By MS/MS 2 2 150600000 66757000 83840000 4237 612 4843;4844 10769;10770;10771;10772 10545;10546;10547 10546 1108;1109;1110;1111 3 NPEPDSDEHTPVEDEEPKK EVWGLSPKNPEPDSDE VEDEEPKKSTTSASTS K N P K K S 0 0 1 3 0 0 5 0 1 0 0 2 0 0 4 1 1 0 0 1 0 0 19 1 2190.9553 Q8N5F7 Q8N5F7 152 170 NKAP NF-kappa-B-activating protein yes yes 3 0.027849 40.493 By MS/MS By matching 1 1 9939000 5199500 4739500 4238 2476 4845 10773;10774 10548 10548 5064 1 NPGFYVEANPMPTFK YGALYEGRNPGFYVEA ANPMPTFKCAVKALFD R N P F K C 1 0 2 0 0 0 1 1 0 0 0 1 1 2 3 0 1 0 1 1 0 0 15 0 1710.8076 P19174 P19174 779 793 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 2 0.00024218 101.89 By MS/MS By MS/MS 2 2 55056000 29399000 25657000 4239 1731 4846;4847 10775;10776;10777;10778 10549;10550;10551;10552 10549 648 8239 4 NPLPPILGSPTK KLPDFLQRNPLPPILG PILGSPTKAVPSFDFP R N P T K A 0 0 1 0 0 0 0 1 0 1 2 1 0 0 4 1 1 0 0 0 0 0 12 0 1232.7129 O75385 O75385 615 626 ULK1 Serine/threonine-protein kinase ULK1 yes yes 2 5.9225E-06 126.1 By MS/MS By MS/MS 1 1 52440000 27430000 25010000 4240 1543 4848 10779;10780 10553;10554 10553 2915;7336 2 NPPGFAFVEFEDPR LRSVWVARNPPGFAFV FVEFEDPRDAADAVRE R N P P R D 1 1 1 1 0 0 2 1 0 0 0 0 0 3 3 0 0 0 0 1 0 0 14 0 1620.7573 A0A087X2D0;P84103;A0A0B4J1Z1;C9JAB2;Q16629 A0A087X2D0 44 57 SRSF3;SRSF7 Serine/arginine-rich splicing factor 3;Serine/arginine-rich splicing factor 7 no no 2 3.8568E-33 176.99 By MS/MS By MS/MS 1 1 32264000 18244000 14020000 4241 175;2165 4849 10781;10782 10555;10556 10556 2 NPPSPRPSQLPVLDR RKRGRPPKNPPSPRPS SQLPVLDRDSTSVLES K N P D R D 0 2 1 1 0 1 0 0 0 0 2 0 0 0 5 2 0 0 0 1 0 0 15 1 1671.9057 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2754 2768 SRCAP Helicase SRCAP yes no 3 0.027704 48.405 By MS/MS By MS/MS 1 1 20477000 9385900 11091000 4242 239 4850 10783;10784 10557;10558 10558 421 2 NPQMPQYSSPQPGSALSPR QDRGYMQRNPQMPQYS PGSALSPRQPSGGQIH R N P P R Q 1 1 1 0 0 3 0 1 0 0 1 0 1 0 5 4 0 0 1 0 0 0 19 0 2040.9687 O14497;H0Y488;A0A1B0GTU5;A0A087WUV6 O14497 756 774 ARID1A AT-rich interactive domain-containing protein 1A yes no 2;3 5.4561E-05 97.384 By matching By MS/MS 1 2 40527000 15819000 24708000 4243 1448 4851 10785;10786;10787 10559;10560 10559 512 2664 2 NPSDSAVHSPFTK SLVQYDLKNPSDSAVH AVHSPFTKRQAFTPSS K N P T K R 1 0 1 1 0 0 0 0 1 0 0 1 0 1 2 3 1 0 0 1 0 0 13 0 1385.6575 F8W726;Q14157 F8W726 419 431 UBAP2L Ubiquitin-associated protein 2-like yes no 2 0.025079 62.237 By MS/MS By matching 1 1 36607000 17849000 18758000 4244 1035 4852 10788;10789 10561 10561 1942 1 NPYALLGEDEC PGSSLAGRNPYALLGE ALLGEDEC________ R N P E C - 1 0 1 1 1 0 2 1 0 0 2 0 0 0 1 0 0 0 1 0 0 0 11 0 1279.5391 A0A140T8Y2;P36915 A0A140T8Y2 397 407 GNL1 Guanine nucleotide-binding protein-like 1 yes no 2 0.014782 76.17 By MS/MS 1 2143300 2143300 0 4245 403 4853 10790 10562 10562 8044 1 NPYLLSEEEDDDVDGDVNVEK NHVTMLLRNPYLLSEE DGDVNVEKNETEPPKG R N P E K N 0 0 2 5 0 0 4 1 0 0 2 1 0 0 1 1 0 0 1 3 0 0 21 0 2393.0394 G3V5V3;O60524 G3V5V3 370 390 NEMF Nuclear export mediator factor NEMF yes no 2 0.0091855 61.165 By MS/MS 1 6522500 0 6522500 4246 1087 4854 10791 10563 10563 2047 1 NPYLLSEEEDDDVDGDVNVEKNETEPPK NHVTMLLRNPYLLSEE KNETEPPKGKKKKQKN R N P P K G 0 0 3 5 0 0 6 1 0 0 2 2 0 0 3 1 1 0 1 3 0 0 28 1 3188.4157 G3V5V3;O60524 G3V5V3 370 397 NEMF Nuclear export mediator factor NEMF yes no 3 1.9169E-14 132.66 By MS/MS By MS/MS 1 1 28854000 13683000 15171000 4247 1087 4855 10792;10793 10564;10565 10565 2047 2 NQASDSENEELPK SESEDPPRNQASDSEN SENEELPKPRVSDSES R N Q P K P 1 0 2 1 0 1 3 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 13 0 1459.6427 Q96ST2 Q96ST2 284 296 IWS1 Protein IWS1 homolog yes yes 2 0.018741 78.287 By MS/MS 1 0 0 0 4248 2711 4856 10794 10566 10566 5607;5608 1 NQASDSENEELPKPR SESEDPPRNQASDSEN NEELPKPRVSDSESEG R N Q P R V 1 1 2 1 0 1 3 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 15 1 1712.7966 Q96ST2 Q96ST2 284 298 IWS1 Protein IWS1 homolog yes yes 2;3 0.00061616 121.72 By MS/MS By MS/MS 2 3 192850000 94055000 98796000 4249 2711 4857 10795;10796;10797;10798;10799 10567;10568;10569;10570 10567 5607;5608 4 NQATGHYILNGK SPHILAIKNQATGHYI GHYILNGKGEEAKSRT K N Q G K G 1 0 2 0 0 1 0 2 1 1 1 1 0 0 0 0 1 0 1 0 0 0 12 0 1314.668 O15072 O15072 757 768 ADAMTS3 A disintegrin and metalloproteinase with thrombospondin motifs 3 yes yes 2 0.031041 44.616 By MS/MS 1 3810200 0 3810200 4250 1470 4858 10800 10571 10571 1 NQATSATSEKDNDDDQSDKGTYTIELENPNSEEVEAR QEMDKMLKNQATSATS NSEEVEARKMIDKVFG K N Q A R K 3 1 4 5 0 2 6 1 0 1 1 2 0 0 1 4 4 0 1 1 0 0 37 2 4099.785 H0Y2V6;Q5SW79;H0YB66 H0Y2V6 445 481 CEP170 Centrosomal protein of 170 kDa yes no 4 0.0008759 50.88 By MS/MS By matching 1 1 25434000 11775000 13659000 4251 1112 4859 10801;10802 10572 10572 8148 1 NQEKPSNSESSLGAKHR NMAKDKERNQEKPSNS SSLGAKHRLTEEGQEK R N Q H R L 1 1 2 0 0 1 2 1 1 0 1 2 0 0 1 4 0 0 0 0 0 0 17 2 1867.9137 Q9H0G5;A0A024QZ33 Q9H0G5 485 501 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 yes no 2 0.03235 40.616 By MS/MS 1 0 0 0 4252 2802 4860 10803 10573 10573 1 NQIPRTPENLITEIR GSNPFLTRNQIPRTPE ENLITEIRSSWRKAIE R N Q I R S 0 2 2 0 0 1 2 0 0 3 1 0 0 0 2 0 2 0 0 0 0 0 15 1 1792.9795 Q5VY60;Q7Z4H7;Q5SYF9 Q5VY60 443 457 HAUS6 HAUS augmin-like complex subunit 6 yes no 3 0.00075963 89.624 By MS/MS By MS/MS 1 1 26254000 12543000 13711000 4253 2280 4861 10804;10805 10574;10575 10575 7656 2 NQKPSQVNGAPGSPTEPAGQK KSPKLQKKNQKPSQVN PTEPAGQKQHQKALPK K N Q Q K Q 2 0 2 0 0 3 1 3 0 0 0 2 0 0 4 2 1 0 0 1 0 0 21 1 2091.0345 Q9BQG0;I3L1L3 Q9BQG0 1255 1275 MYBBP1A Myb-binding protein 1A yes no 2;3 0.00051199 76.704 By MS/MS By MS/MS 3 3 81340000 42123000 39217000 4254 2741 4862;4863 10806;10807;10808;10809;10810;10811 10576;10577;10578;10579;10580;10581;10582 10578 129 5689 7 NQMGDSNISSPGLQPSTQLSNLGSTETLEEMPSGSQDK RAKDEYERNQMGDSNI MPSGSQDKSAPSGHKH R N Q D K S 0 0 3 2 0 4 3 4 0 1 4 1 2 0 3 8 3 0 0 0 0 0 38 0 3963.795 Q9NPI6;A0A087WT55 Q9NPI6 171 208 DCP1A mRNA-decapping enzyme 1A yes no 3 8.0743E-06 65.962 By matching By MS/MS 1 1 68246000 23957000 44290000 4255 2890 4864 10812;10813 10583 10583 1141;1142 6084;6085 1 NQNYLVPSPVLR DGIKARNRNQNYLVPS LVPSPVLRILDHTAFS R N Q L R I 0 1 2 0 0 1 0 0 0 0 2 0 0 0 2 1 0 0 1 2 0 0 12 0 1398.7619 C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6 C9J3R1 81 92 ZNF639 Zinc finger protein 639 yes no 2 1.3511E-09 140.82 By MS/MS By MS/MS 1 1 14138000 8082800 6055200 4256 619 4865 10814;10815 10584;10585 10585 1141 2 NQPDSRQLQPSQR N Q Q R 0 2 1 1 0 4 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 13 1 1552.7706 REV__F8WCQ0 yes no 2 0.0076624 66.27 By MS/MS By matching 1 1 18573000 11979000 6594600 + 4257 3173 4866 10816;10817 10586 10586 1 NQSFCPTVNLDK MKHYHLKRNQSFCPTV CPTVNLDKLWTLVSEQ R N Q D K L 0 0 2 1 1 1 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 12 0 1421.6609 E9PJD9;E9PLL6;P46776 E9PJD9 9 20 RPL27A 60S ribosomal protein L27a yes no 2 0.00067722 115.23 By MS/MS By MS/MS 1 1 11931000 5599600 6331800 4258 889 4867 10818;10819 10587;10588 10587 2 NQSGEYKPKSPPPPPPVPTAAIGDTQLSPSSLR N Q L R 2 1 1 1 0 2 1 2 0 1 2 2 0 0 9 5 2 0 1 1 0 0 33 2 3412.7627 REV__Q9H7D0 yes yes 3 0.032356 42.828 By MS/MS 1 5724900 0 5724900 + 4259 3224 4868 10820 10589 10589 0 NQSLGQSAPSLTAGLK ASNLVRMRNQSLGQSA PSLTAGLKELSLPRRG R N Q L K E 2 0 1 0 0 2 0 2 0 0 3 1 0 0 1 3 1 0 0 0 0 0 16 0 1570.8315 Q6P0Q8 Q6P0Q8 142 157 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 2 0.0077781 73.168 By MS/MS By matching 1 1 11694000 7151500 4542300 4260 2313 4869 10821;10822 10590 10590 4664 1 NQSLVEENEK NLQSLMEKNQSLVEEN SLVEENEKLSRGLSEA K N Q E K L 0 0 2 0 0 1 3 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1188.5622 O95239;Q2VIQ3 O95239 392 401 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2 0.024025 61.419 By MS/MS 1 4988700 4988700 0 4261 1585 4870 10823 10591 10591 3003 1 NQSNESSMLSTDTK PLMDFISKNQSNESSM SMLSTDTKKASILLIR K N Q T K K 0 0 2 1 0 1 1 0 0 0 1 1 1 0 0 4 2 0 0 0 0 0 14 0 1540.6675 X6RG95;X6R751;Q86X24 X6RG95 56 69 HORMAD1 HORMA domain-containing protein 1 yes no 2 0.030519 44.639 By MS/MS 1 0 0 0 4262 2414 4871 10824 10592 10592 978 1 NQSPTEAEKPASSSLPSSPPPQLLTR LRLREGLKNQSPTEAE PPPQLLTRNVVFGLGG K N Q T R N 2 1 1 0 0 2 2 0 0 0 3 1 0 0 6 6 2 0 0 0 0 0 26 1 2718.3824 Q99567;I3L2W3 Q99567 33 58 NUP88 Nuclear pore complex protein Nup88 yes no 3 0.030269 40.396 By MS/MS 1 9331600 0 9331600 4263 2725 4872 10825 10593 10593 1 NQSPVLEPVGR ATYSALNRNQSPVLEP PVLEPVGRSTLAQRRG R N Q G R S 0 1 1 0 0 1 1 1 0 0 1 0 0 0 2 1 0 0 0 2 0 0 11 0 1194.6357 P51812 P51812 713 723 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 2 0.0021223 91.093 By MS/MS By MS/MS 1 1 22926000 11162000 11765000 4264 1879 4873 10826;10827 10594;10595 10594 3642 2 NQSSRHLSIGSLNSATPEEFK NLRASLNKNQSSRHLS SATPEEFKVGIIGGGH K N Q F K V 1 1 2 0 0 1 2 1 1 1 2 1 0 1 1 5 1 0 0 0 0 0 21 1 2301.1349 G3V2D4;Q6NXP6 G3V2D4 58 78 NOXRED1 NADP-dependent oxidoreductase domain-containing protein 1 yes no 3 0.026562 51.819 By MS/MS 1 0 0 0 4265 1068 4874 10828 10596 10596 2017;2018;2019;2020 1 NQTYSFSPSK SGPSTPLKNQTYSFSP TYSFSPSKSYSRQSSS K N Q S K S 0 0 1 0 0 1 0 0 0 0 0 1 0 1 1 3 1 0 1 0 0 0 10 0 1157.5353 Q86YS7;H0YFE9 Q86YS7 289 298 C2CD5 C2 domain-containing protein 5 yes no 2 0.020033 64.827 By matching By MS/MS 1 1 17882000 7472800 10409000 4266 2422 4875 10829;10830 10597 10597 4950 1 NQVALNPQNTVFDAK RLIGDAAKNQVALNPQ QNTVFDAKRLIGRKFG K N Q A K R 2 0 3 1 0 2 0 0 0 0 1 1 0 1 1 0 1 0 0 2 0 0 15 0 1657.8424 A0A0G2JIW1;P0DMV9;P0DMV8 A0A0G2JIW1 58 72 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.0075126 80.871 By MS/MS By MS/MS 1 1 16123000 8198000 7925200 4267 351 4876 10831;10832 10598;10599 10599 2 NQVAMNPTNTVFDAK RLIGDAAKNQVAMNPT TNTVFDAKRLIGRRFD K N Q A K R 2 0 3 1 0 1 0 0 0 0 0 1 1 1 1 0 2 0 0 2 0 0 15 0 1648.7879 P11142;E9PKE3;E9PNE6;E9PLF4;E9PQQ4;E9PQK7;E9PPY6;E9PN25;E9PK54 P11142 57 71 HSPA8 Heat shock cognate 71 kDa protein no no 2 0.031612 67.879 By matching By MS/MS 1 1 18245000 8700000 9544500 4268 1680;894 4877 10833;10834 10600 10600 335 0 NQVIIPLVLSPDRDEDLMR HEKTPLFRNQVIIPLV DRDEDLMRQTEGRVPV R N Q M R Q 0 2 1 3 0 1 1 0 0 2 3 0 1 0 2 1 0 0 0 2 0 0 19 1 2222.1729 Q96G25 Q96G25 73 91 MED8 Mediator of RNA polymerase II transcription subunit 8 yes yes 3 0.00507 64.565 By MS/MS 1 6507000 0 6507000 4269 2650 4878 10835 10601 10601 1056 5468 1 NQWQLSADDLK DCAQLKEKNQWQLSAD QLSADDLKKLKPGLEK K N Q L K K 1 0 1 2 0 2 0 0 0 0 2 1 0 0 0 1 0 1 0 0 0 0 11 0 1316.6361 K7ERC4;P09543 K7ERC4 128 138 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes no 2 0.0011431 105.65 By MS/MS By MS/MS 1 1 11545000 5361700 6183300 4270 1395 4879 10836;10837 10602;10603 10603 2566 2 NQWQLSADDLKK DCAQLKEKNQWQLSAD LSADDLKKLKPGLEKD K N Q K K L 1 0 1 2 0 2 0 0 0 0 2 2 0 0 0 1 0 1 0 0 0 0 12 1 1444.731 K7ERC4;P09543 K7ERC4 128 139 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase yes no 2 0.0017351 92.792 By MS/MS By MS/MS 1 1 16290000 10202000 6087400 4271 1395 4880 10838;10839 10604;10605 10604 2566 2 NREEEWDPEYTPK SNNDFQKRNREEEWDP WDPEYTPKSKKYYLHD R N R P K S 0 1 1 1 0 0 4 0 0 0 0 1 0 0 2 0 1 1 1 0 0 0 13 1 1691.7427 Q9Y2W1 Q9Y2W1 864 876 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.00080042 88.951 By MS/MS By MS/MS 1 1 10238000 4834500 5403800 4272 3096 4881 10840;10841 10606;10607 10606 7942 2 NRSAEEGELAESK LKAKLRPRNRSAEEGE EGELAESKSSQKESAV R N R S K S 2 1 1 0 0 0 4 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 13 1 1418.6638 Q9C0C2 Q9C0C2 1664 1676 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 3.73E-19 164.8 By matching By MS/MS 1 1 50414000 26194000 24220000 4273 2791 4882 10842;10843 10608 10608 5823 1 NRSYKSSQSSTHESESESK GKRRKKKKNRSYKSSQ HESESESKESVKKKKK K N R S K E 0 1 1 0 0 1 3 0 1 0 0 2 0 0 0 8 1 0 1 0 0 0 19 2 2156.957 Q8N9E0 Q8N9E0 136 154 FAM133A Protein FAM133A yes yes 3 0.026758 61.345 By matching By MS/MS 1 2 7160200 3905700 3254500 4274 2489 4883;4884 10844;10845;10846 10609;10610 10609 5077;5078 1 NRTHVACQCSHTASFAVLMDISR RGCELLSRNRTHVACQ AVLMDISRRENGEVLP R N R S R R 3 2 1 1 2 1 0 0 2 1 1 0 1 1 0 3 2 0 0 2 0 0 23 1 2660.237 Q9NYQ6 Q9NYQ6 2437 2459 CELSR1 Cadherin EGF LAG seven-pass G-type receptor 1 yes yes 3 0.014658 47.32 By MS/MS 1 6454900 6454900 0 4275 2950 4885 10847 10611 10611 1174 7888 1 NRVNMTYEKMSR ARLWGNHKNRVNMTYE MTYEKMSRALRHYYKL K N R S R A 0 2 2 0 0 0 1 0 0 0 0 1 2 0 0 1 1 0 1 1 0 0 12 2 1527.7286 Q9Y603 Q9Y603 270 281 ETV7 Transcription factor ETV7 yes yes 2 0.0069382 63.091 By matching By MS/MS 1 1 239600000 119960000 119640000 4276 3140 4886 10848;10849 10612 10612 1246 6720 1 NSAEDALALR N S L R 3 1 1 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 0 1058.5356 REV__M0R1F6 yes no 2 0.0159 68.355 By matching By MS/MS 1 2 46712000 16169000 30543000 + 4277 3194 4887 10850;10851;10852 10613 10613 6792 1 NSAILSDPSVFSPLNK RPRSGSDRNSAILSDP SVFSPLNKSETKSGDK R N S N K S 1 0 2 1 0 0 0 0 0 1 2 1 0 1 2 4 0 0 0 1 0 0 16 0 1687.8781 Q03164;E9PR05 Q03164 186 201 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 0.021262 84.821 By MS/MS 1 1640600 0 1640600 4278 1994 4888 10853 10614 10614 3838;3839 0 NSAPVSVSAVRTSFMVK AHALTGRRNSAPVSVS VRTSFMVKMCQARAVP R N S V K M 2 1 1 0 0 0 0 0 0 0 0 1 1 1 1 4 1 0 0 4 0 0 17 1 1778.9349 Q2M1Z3 Q2M1Z3 1177 1193 ARHGAP31 Rho GTPase-activating protein 31 yes yes 2 0.031858 42.095 By MS/MS 1 4084200 0 4084200 4279 2179 4889 10854 10615 10615 872 1 NSASATTPLSGNSSR NYTRPSSRNSASATTP PLSGNSSRRGSGDTSS R N S S R R 2 1 2 0 0 0 0 1 0 0 1 0 0 0 1 5 2 0 0 0 0 0 15 0 1448.6855 C9JSU1;Q9Y608 C9JSU1 79 93 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2 0.0083186 73.953 By MS/MS By matching 1 1 13036000 7177500 5858400 4280 693 4890 10855;10856 10616 10616 1283;1284;1285 1 NSASVGIIQR TPKESILKNSASVGII ASVGIIQRDESPMEKG K N S Q R D 1 1 1 0 0 1 0 1 0 2 0 0 0 0 0 2 0 0 0 1 0 0 10 0 1043.5724 Q53EU6 Q53EU6 65 74 AGPAT9 Glycerol-3-phosphate acyltransferase 3 yes yes 2 0.011488 73.233 By matching By MS/MS 1 1 30163000 12583000 17581000 4281 2201 4891 10857;10858 10617 10617 4407 1 NSATCHSEDSDLEID VLVLTSVRNSATCHSE EDSDLEID________ R N S I D - 1 0 1 3 1 0 2 0 1 1 1 0 0 0 0 3 1 0 0 0 0 0 15 0 1691.6581 Q13371 Q13371 287 301 PDCL Phosducin-like protein yes yes 2 0.0071836 75.316 By MS/MS By MS/MS 1 1 31041000 18096000 12945000 4282 2057 4892 10859;10860 10618;10619 10619 4049 2 NSATFKSFEDR SRKLGDMRNSATFKSF TFKSFEDRVGTIKSKV R N S D R V 1 1 1 1 0 0 1 0 0 0 0 1 0 2 0 2 1 0 0 0 0 0 11 1 1300.6048 O43399 O43399 160 170 TPD52L2 Tumor protein D54 yes yes 2 0.00026461 116.79 By MS/MS By MS/MS 2 2 749780000 358310000 391480000 4283 1499 4893;4894 10861;10862;10863;10864 10620;10621;10622 10621 2799 3 NSDDAPWSPK KSRPKKKKNSDDAPWS DDAPWSPKARVTPTLP K N S P K A 1 0 1 2 0 0 0 0 0 0 0 1 0 0 2 2 0 1 0 0 0 0 10 0 1115.4884 Q9UPP1;H0Y3N9;H0Y589 Q9UPP1 873 882 PHF8 Histone lysine demethylase PHF8 yes no 2 0.00013041 146.67 By MS/MS By MS/MS 1 1 47269000 22767000 24502000 4284 3066 4895 10865;10866 10623;10624;10625;10626 10626 6479 4 NSDLLTSPDVGLLK LKPHLRAKNSDLLTSP SPDVGLLKLASPELER K N S L K L 0 0 1 2 0 0 0 1 0 0 4 1 0 0 1 2 1 0 0 1 0 0 14 0 1470.793 P05412 P05412 57 70 JUN Transcription factor AP-1 yes yes 2 4.6453E-111 228.11 By MS/MS By MS/MS 1 1 189700000 99523000 90174000 4285 1642 4896 10867;10868 10627;10628;10629 10629 3098;3099;7367 3 NSESESNKVAAETQSPSLFGSTK QQHGNSGRNSESESNK PSLFGSTKLQQESTFL R N S T K L 2 0 2 0 0 1 3 1 0 0 1 2 0 1 1 6 2 0 0 1 0 0 23 1 2397.1296 Q9UKX7 Q9UKX7 207 229 NUP50 Nuclear pore complex protein Nup50 yes yes 2;3 5.432E-06 122.34 By MS/MS By MS/MS 3 2 174630000 89728000 84898000 4286 3032 4897;4898 10869;10870;10871;10872;10873 10630;10631;10632;10633;10634 10632 145 6387 5 NSFLGSPR RARLNSIKNSFLGSPR NSFLGSPRFHRRKLQV K N S P R F 0 1 1 0 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 8 0 876.44537 Q8IWQ3;H0YES6;J3KNK0;Q8TDC3 Q8IWQ3 484 491 BRSK2;BRSK1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 yes no 2 0.012017 84.658 By MS/MS By matching 1 1 12756000 7522700 5233100 4287 2430 4899 10874;10875 10635 10635 4970 1 NSFSFSDEK ESADSLYRNSFSFSDE SFSFSDEKLNSPTDST R N S E K L 0 0 1 1 0 0 1 0 0 0 0 1 0 2 0 3 0 0 0 0 0 0 9 0 1059.4509 Q9H4X1 Q9H4X1 86 94 RGCC Regulator of cell cycle RGCC yes yes 1 0.012135 50.878 By MS/MS 1 11079000 11079000 0 4288 2834 4900 10876 10636 10636 5948;5949 1 NSFTPLSSSNTIR QTPVRMRRNSFTPLSS LSSSNTIRRPRNYSVG R N S I R R 0 1 2 0 0 0 0 0 0 1 1 0 0 1 1 4 2 0 0 0 0 0 13 0 1422.7103 O60825 O60825 465 477 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 2 0.009175 74.853 By MS/MS By MS/MS 1 1 19661000 10321000 9340200 4289 1529 4901 10877;10878 10637;10638;10639 10637 2885 3 NSISLSVTFYINMLKAK LQLKEEKKNSISLSVT YINMLKAKAEQNDLPG K N S A K A 1 0 2 0 0 0 0 0 0 2 2 2 1 1 0 3 1 0 1 1 0 0 17 1 1928.0441 Q8IYW2 Q8IYW2 237 253 CFAP46 Cilia- and flagella-associated protein 46 yes yes 3 0.031953 40.242 By MS/MS 1 0 0 0 4290 2445 4902 10879 10640 10640 988 1 NSKYEYDPDISPPR ASHLSFPKNSKYEYDP DPDISPPRKKQAKSHF K N S P R K 0 1 1 2 0 0 1 0 0 1 0 1 0 0 3 2 0 0 2 0 0 0 14 1 1679.7791 Q9BRD0;H7C462 Q9BRD0 315 328 BUD13 BUD13 homolog yes no 2;3 0.0013157 97.073 By MS/MS By MS/MS 2 2 28130000 13956000 14174000 4291 2742 4903 10880;10881;10882;10883 10641;10642;10643;10644 10644 5696;8447 4 NSLDASRPAGLSPTLTPGER EQPLALTKNSLDASRP PTLTPGERQQVGLCLG K N S E R Q 2 2 1 1 0 0 1 2 0 0 3 0 0 0 3 3 2 0 0 0 0 0 20 1 2038.0443 F8W708;E7ERW0;E7EQU6;E7EWF5;A0A075B6E4;A0A0A6YYI5;G5E9M7;Q14135;G5E9M9 F8W708 138 157 VGLL4 Transcription cofactor vestigial-like protein 4 yes no 3 0.002826 64.5 By MS/MS By MS/MS 1 1 27743000 14961000 12783000 4292 8 4904 10884;10885 10645;10646 10646 11 2 NSLESISSIDR FAAGIGHRNSLESISS ESISSIDRELSPEGPG R N S D R E 0 1 1 1 0 0 1 0 0 2 1 0 0 0 0 4 0 0 0 0 0 0 11 0 1219.6044 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YCG0 A0A0G2JNZ2 1219 1229 SCRIB Protein scribble homolog yes no 2 0.001374 91.712 By MS/MS By MS/MS 2 2 103660000 54245000 49414000 4293 361 4905;4906 10886;10887;10888;10889 10647;10648;10649 10649 659;660;661 3 NSLESYAFNMK QRDKVSSKNSLESYAF ESYAFNMKATVEDEKL K N S M K A 1 0 2 0 0 0 1 0 0 0 1 1 1 1 0 2 0 0 1 0 0 0 11 0 1302.5914 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PM13;E9PS65 P11142 540 550 HSPA8 Heat shock cognate 71 kDa protein yes no 2 0.03208 70.412 By matching By MS/MS 1 1 13227000 6917200 6309900 4294 1680 4907 10890;10891 10650 10650 623 1 NSLLAGGDDDTMSVISGISSR WLPLMSYRNSLLAGGD VISGISSRGSTVRSKK R N S S R G 1 1 1 3 0 0 0 3 0 2 2 0 1 0 0 5 1 0 0 1 0 0 21 0 2093.9899 Q8N3U4 Q8N3U4 1046 1066 STAG2 Cohesin subunit SA-2 yes yes 2;3 0.00011143 89.043 By MS/MS By MS/MS 5 4 81321000 41793000 39528000 4295 2468 4908;4909 10892;10893;10894;10895;10896;10897;10898;10899;10900 10651;10652;10653;10654;10655;10656 10652 999 5042;5043;5044 5 NSLPASPAHQLSSSPR PLLLAQPRNSLPASPA HQLSSSPRLGGAAQGP R N S P R L 2 1 1 0 0 1 0 0 1 0 2 0 0 0 3 5 0 0 0 0 0 0 16 0 1647.8329 Q8TEK3 Q8TEK3 996 1011 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 0.030743 54.768 By MS/MS By matching 1 1 9434700 4114200 5320500 4296 2544 4910 10901;10902 10657 10657 1 NSLRVEGDNIYVR LQLIEGKKNSLRVEGD EGDNIYVRHSNLMLEE K N S V R H 0 2 2 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 1 2 0 0 13 1 1533.79 O43491;H0Y5B0;E9PMV8;E9PPC9;Q6ZSX4 O43491 613 625 EPB41L2 Band 4.1-like protein 2 yes no 3 1.2371E-06 125.84 By MS/MS By MS/MS 1 1 21675000 12346000 9328900 4297 1502 4911 10903;10904 10658;10659;10660 10658 2809;8200 3 NSLTGEEGQLAR RRAGALRRNSLTGEEG GEEGQLARVSNWPLYC R N S A R V 1 1 1 0 0 1 2 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 12 0 1273.6262 Q9BX95 Q9BX95 111 122 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 2 0.02461 62.528 By MS/MS By matching 1 1 30182000 15988000 14195000 4298 2770 4912 10905;10906 10661 10661 5763;7833 1 NSMLMMNLLAFVSAVLMGFSKLGK FVNRFGRRNSMLMMNL MGFSKLGKSFEMLILG R N S G K S 2 0 2 0 0 0 0 2 0 0 5 2 4 2 0 3 0 0 0 2 0 0 24 1 2601.3555 A6NL68;A0A0D9SG74;A0A0D9SFK9;P11166 A6NL68 62 85 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 yes no 3 0.017185 56.29 By MS/MS 1 6202400 6202400 0 4299 344 4913 10907 10662 10662 610;611;612 0 NSMPASSFQQQK REAEEVYRNSMPASSF ASSFQQQKLRVCEVCS R N S Q K L 1 0 1 0 0 3 0 0 0 0 0 1 1 1 1 3 0 0 0 0 0 0 12 0 1351.619 Q9Y383;B8ZZ10;A8MYV2;A0A0A6YYJ8;Q9NQ29 Q9Y383 175 186 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 yes no 2 0.032068 40.724 By MS/MS 1 0 0 0 4300 3103 4914 10908 10663 10663 1 NSNSPPSPSSMNQR QVHSTTRRNSNSPPSP SPSSMNQRRLGPREVG R N S Q R R 0 1 3 0 0 1 0 0 0 0 0 0 1 0 3 5 0 0 0 0 0 0 14 0 1501.658 Q7Z5L9 Q7Z5L9 454 467 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 0.019841 68.978 By MS/MS By MS/MS 2 3 18076000 8466100 9609700 4301 2391 4915;4916;4917 10909;10910;10911;10912;10913 10664;10665;10666 10666 966 4868;4869 1 NSPEDLGLSLTGDSCK KTSEIEPKNSPEDLGL SLTGDSCKLMLSTSEY K N S C K L 0 0 1 2 1 0 1 2 0 0 3 1 0 0 1 3 1 0 0 0 0 0 16 0 1691.7672 Q12888;A6NNK5;C9JXV0 Q12888 499 514 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.00030445 110.34 By MS/MS By MS/MS 1 1 91559000 51947000 39612000 4302 2031 4918 10914;10915 10667;10668;10669 10667 3960 3 NSPGSQVASNPR TPHALGSRNSPGSQVA SQVASNPRQAAYEMRM R N S P R Q 1 1 2 0 0 1 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 12 0 1212.5847 Q9H0D6 Q9H0D6 447 458 XRN2 5-3 exoribonuclease 2 yes yes 2 2.9141E-11 150.9 By MS/MS By MS/MS 1 1 98151000 48103000 50049000 4303 2801 4919 10916;10917 10670;10671 10670 5852 2 NSPLLSVSSQTITK KDSAQKQKNSPLLSVS VSSQTITKENNRNVHL K N S T K E 0 0 1 0 0 1 0 0 0 1 2 1 0 0 1 4 2 0 0 1 0 0 14 0 1473.8039 Q8ND24;E9PRE9 Q8ND24 46 59 RNF214 RING finger protein 214 yes no 2 0.0013323 91.789 By MS/MS By MS/MS 1 1 11966000 7243800 4721800 4304 2505 4920 10918;10919 10672;10673 10673 5114 2 NSPNNISGISNPPGTPR GDIDGLPKNSPNNISG SNPPGTPRDDGELGGN K N S P R D 0 1 4 0 0 0 0 2 0 2 0 0 0 0 4 3 1 0 0 0 0 0 17 0 1720.8493 Q9NW25;A0A087WVT6;Q9BWW4 Q9NW25 236 252 SSBP3 Single-stranded DNA-binding protein 3 yes no 2 1.0764E-09 137.73 By matching By MS/MS 1 1 106340000 44745000 61598000 4305 81 4921 10920;10921 10674 10674 6849 1 NSPTFKSFEEK TKKLEDVKNSPTFKSF TFKSFEEKVENLKGSP K N S E K V 0 0 1 0 0 0 2 0 0 0 0 2 0 2 1 2 1 0 0 0 0 0 11 1 1312.6299 H0YC42;P55327;E5RK35 H0YC42 170 180 TPD52 Tumor protein D52 yes no 2;3 0.0010517 111.66 By MS/MS By MS/MS 2 2 124560000 75031000 49524000 4306 1167 4922 10922;10923;10924;10925 10675;10676;10677;10678 10677 2213;7214 4 NSPTFKSFEEKVENLK TKKLEDVKNSPTFKSF EEKVENLKGSPKNVES K N S L K G 0 0 2 0 0 0 3 0 0 0 1 3 0 2 1 2 1 0 0 1 0 0 16 2 1895.9629 H0YC42;P55327;E5RK35 H0YC42 170 185 TPD52 Tumor protein D52 yes no 2;3 0.00058099 99.371 By matching By MS/MS 2 2 209770000 115520000 94255000 4307 1167 4923 10926;10927;10928;10929 10679;10680 10679 2213;7214 2 NSPVTKTPPR RKFLMECRNSPVTKTP PVTKTPPRDLPTIPGV R N S P R D 0 1 1 0 0 0 0 0 0 0 0 1 0 0 3 1 2 0 0 1 0 0 10 1 1095.6037 Q13541 Q13541 64 73 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 2 0.017252 75.483 By MS/MS By matching 1 1 17258000 15626000 1632000 4308 2063 4924 10930;10931 10681 10681 4073;7557 1 NSQEDSEDSEDKDVK KNKRRSGKNSQEDSED DSEDKDVKTKKDDSHS K N S V K T 0 0 1 4 0 1 3 0 0 0 0 2 0 0 0 3 0 0 0 1 0 0 15 1 1723.702 Q9H1E3 Q9H1E3 53 67 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 0.0017019 109.1 By MS/MS By MS/MS 5 2 44351000 22923000 21428000 4309 2816 4925;4926 10932;10933;10934;10935;10936;10937;10938 10682;10683;10684;10685;10686 10683 5895;5896 5 NSQPHSPTSSLTSGGSLPLLQSPPSTR ISLPLSARNSQPHSPT LQSPPSTRLSPARHPL R N S T R L 0 1 1 0 0 2 0 2 1 0 4 0 0 0 5 8 3 0 0 0 0 0 27 0 2732.3729 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 304 330 AMOT Angiomotin yes no 3;4 3.1279E-40 168.45 By MS/MS By MS/MS 3 4 734460000 371950000 362520000 4310 2197 4927;4928 10939;10940;10941;10942;10943;10944;10945 10687;10688;10689;10690;10691;10692;10693;10694;10695;10696;10697;10698 10692 4389;4390;4391;4392;4393;4394;7627;7628 12 NSQPHSPTSSLTSGGSLPLLQSPPSTRLSPAR ISLPLSARNSQPHSPT STRLSPARHPLVPNQG R N S A R H 1 2 1 0 0 2 0 2 1 0 5 0 0 0 6 9 3 0 0 0 0 0 32 1 3256.68 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 304 335 AMOT Angiomotin yes no 3;4 0.0075342 50.593 By matching By MS/MS 3 3 101480000 51808000 49675000 4311 2197 4929;4930 10946;10947;10948;10949;10950;10951 10699;10700;10701 10701 4389;4390;4391;4392;4393;4394;4395;7627;7628 2 NSQPQTRSPFFQRPQIQPPR ________________ RPQIQPPRATIPNSSP M N S P R A 0 3 1 0 0 5 0 0 0 1 0 0 0 2 5 2 1 0 0 0 0 0 20 2 2408.2462 A0A0A0MSA7;O43432;B1AN91 A0A0A0MSA7 2 21 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 3 0.032163 41.912 By MS/MS 1 0 0 0 4312 243 4931 10952 10702 10702 1 NSQSFDSSLHGAGNGISR ISSPVTVRNSQSFDSS GAGNGISRIQSCIPSP R N S S R I 1 1 2 1 0 1 0 3 1 1 1 0 0 1 0 5 0 0 0 0 0 0 18 0 1832.8402 X6RGK9;B7Z326;A0A0C4DFN6;A0A0A0MSS3;Q8ND83 X6RGK9 165 182 SLAIN1 SLAIN motif-containing protein 1 yes no 2 0.00022136 119.38 By MS/MS By MS/MS 2 2 32509000 20493000 12015000 4313 257 4932;4933 10953;10954;10955;10956 10703;10704;10705 10705 9 448 3 NSSEASSGDFLDLK ESSGLQRRNSSEASSG SGDFLDLKGEGDIHEN R N S L K G 1 0 1 2 0 0 1 1 0 0 2 1 0 1 0 4 0 0 0 0 0 0 14 0 1468.6682 Q9UK76;J3KSH8;J3KT51 Q9UK76 86 99 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 2 9.2577E-43 187.56 By MS/MS By MS/MS 1 1 47575000 24490000 23084000 4314 3020 4934 10957;10958 10706;10707 10707 6361;6362 2 NSSLGSPSNLCGSPPGSIR DLSALLCRNSSLGSPS GSPPGSIRKPPNLEGI R N S I R K 0 1 2 0 1 0 0 3 0 1 2 0 0 0 3 6 0 0 0 0 0 0 19 0 1885.8952 Q9C0B0 Q9C0B0 373 391 UNK RING finger protein unkempt homolog yes yes 2 2.7785E-06 126.43 By MS/MS By MS/MS 1 1 42667000 18833000 23835000 4315 2788 4935 10959;10960 10708;10709 10708 5798;5799 2 NSSLIIHQRMHSGEK HCEKAFCKNSSLIIHQ QRMHSGEKRFICSECG K N S E K R 0 1 1 0 0 1 1 1 2 2 1 1 1 0 0 3 0 0 0 0 0 0 15 1 1735.8788 Q8WXB4 Q8WXB4 748 762 ZNF606 Zinc finger protein 606 yes yes 2 0.029955 41.704 By matching By MS/MS 1 1 6505100 3044400 3460700 4316 2567 4936 10961;10962 10710 10710 1029 0 NSSLLSFDNEDENE KNSQKQIKNSSLLSFD FDNEDENE________ K N S N E - 0 0 3 2 0 0 3 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 14 0 1611.6536 Q96AT1 Q96AT1 141 154 KIAA1143 Uncharacterized protein KIAA1143 yes yes 2 1.318E-11 143.46 By MS/MS By MS/MS 1 1 95283000 52891000 42392000 4317 2622 4937 10963;10964 10711;10712 10712 5392 2 NSSMDEEIENPYWSVR DVFRYRQRNSSMDEEI ENPYWSVRALVQQYEG R N S V R A 0 1 2 1 0 0 3 0 0 1 0 0 1 0 1 3 0 1 1 1 0 0 16 0 1954.8367 Q155Q3 Q155Q3 184 199 DIXDC1 Dixin yes yes 2 0.00059851 86.814 By matching By MS/MS 1 1 15887000 8260900 7626300 4318 2146 4938 10965;10966 10713 10713 862 4257 1 NSSNTLPIPK SASVSPTRNSSNTLPI SNTLPIPKKGTVETKI R N S P K K 0 0 2 0 0 0 0 0 0 1 1 1 0 0 2 2 1 0 0 0 0 0 10 0 1069.5768 A2A2Y8;Q9UMD9 A2A2Y8 178 187 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen yes no 2 0.0032827 69.216 By matching By MS/MS 1 1 7164500 3469600 3694900 4319 450 4939 10967;10968 10714 10714 18;19 842;6962 1 NSSNTSVGSPSNTIGR KLLHNHLKNSSNTSVG SPSNTIGRTPSRHTSS K N S G R T 0 1 3 0 0 0 0 2 0 1 0 0 0 0 1 5 2 0 0 1 0 0 16 0 1576.7441 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 859 874 CLASP1 CLIP-associating protein 1 yes no 2 0.00035649 100.69 By MS/MS By MS/MS 1 1 29679000 15623000 14056000 4320 1043 4940 10969;10970 10715;10716 10715 1972 2 NSSPAPPQPAPGK GTSTEPVKNSSPAPPQ PPQPAPGKVESGAGDA K N S G K V 2 0 1 0 0 1 0 1 0 0 0 1 0 0 5 2 0 0 0 0 0 0 13 0 1246.6306 J3QSD7;Q9NYV4 J3QSD7 1080 1092 CDK12 Cyclin-dependent kinase 12 yes no 2 0.0020383 87.863 By MS/MS By matching 1 1 107060000 61124000 45938000 4321 1361 4941 10971;10972 10717 10717 2521 1 NSSRFINRHNMPGPK GRGYGMPRNSSRFINR RHNMPGPKVDFYPGPG R N S P K V 0 2 3 0 0 0 0 1 1 1 0 1 1 1 2 2 0 0 0 0 0 0 15 2 1753.8795 A0A096LPI3;Q9NP73 A0A096LPI3 256 270 ALG13 Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 yes no 2 0.024978 50.791 By matching By MS/MS 1 1 19511000 11031000 8480600 4322 184 4942 10973;10974 10718 10718 80 323 0 NSSSPVSPASVPGQR STTASARRNSSSPVSP PASVPGQRRLASRNGD R N S Q R R 1 1 1 0 0 1 0 1 0 0 0 0 0 0 3 5 0 0 0 2 0 0 15 0 1468.727 Q9H1B7 Q9H1B7 656 670 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 2 0.029918 55.546 By MS/MS By matching 1 1 29787000 14893000 14894000 4323 2815 4943 10975;10976 10719 10719 5886;5887;5888;5889 1 NSSTDQGSDEEGSLQK VRCPRVRKNSSTDQGS DEEGSLQKEQESAMDK K N S Q K E 0 0 1 2 0 2 2 2 0 0 1 1 0 0 0 4 1 0 0 0 0 0 16 0 1680.7075 Q12789 Q12789 1061 1076 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.024118 60.541 By MS/MS 1 2957300 0 2957300 4324 2025 4944 10977 10720 10720 3937 1 NSSTPGLQVPVSPTVPIQNQK GNNQDLTRNSSTPGLQ TVPIQNQKYVPNSTDS R N S Q K Y 0 0 2 0 0 3 0 1 0 1 1 1 0 0 4 3 2 0 0 3 0 0 21 0 2190.1644 Q03164 Q03164 3025 3045 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 2;3 9.8789E-11 135.26 By MS/MS By MS/MS 2 3 144120000 73620000 70502000 4325 1994 4945;4946 10978;10979;10980;10981;10982 10721;10722;10723;10724;10725;10726 10722 3840;7521;7522 6 NSSYFVEWIPNNVK QMLNVQNKNSSYFVEW EWIPNNVKTAVCDIPP K N S V K T 0 0 3 0 0 0 1 0 0 1 0 1 0 1 1 2 0 1 1 2 0 0 14 0 1695.8257 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A0B4J269;Q13509;K7ESM5;Q9BUF5;P68371;P04350 Q5JP53 319 332 TUBB;TUBB2B;TUBB2A;TUBB3;TUBB6;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 2 3.7631E-20 155.33 By MS/MS 1 18668000 18668000 0 4326 1653;1958 4947 10983 10727 10727 1 NSVDTATSSSLSTPSEPLSPTSSLGEERN SSTSGSKRNSVDTATS SSLGEERN________ R N S R N - 1 1 2 1 0 0 3 1 0 0 3 0 0 0 3 9 4 0 0 1 0 0 29 1 2949.3687 P13807 P13807 709 737 GYS1 Glycogen [starch] synthase, muscle yes yes 3 0.0011834 58.945 By MS/MS By MS/MS 1 1 27347000 14800000 12547000 4327 1696 4948 10984;10985 10728;10729 10728 3197 2 NSVHEQEAINSDPELSNCENFQK GYSPRVKKNSVHEQEA SNCENFQKTDVKDDLS K N S Q K T 1 0 4 1 1 2 4 0 1 1 1 1 0 1 1 3 0 0 0 1 0 0 23 0 2688.1722 Q8IX90 Q8IX90 109 131 SKA3 Spindle and kinetochore-associated protein 3 yes yes 3 6.6308E-05 83.747 By MS/MS By MS/MS 1 1 36782000 18697000 18085000 4328 2434 4949 10986;10987 10730;10731 10730 4978 2 NSVLSDPGLDSPRTSPVIMAR LSESLMNRNSVLSDPG TSPVIMARVAQHHRRQ R N S A R V 1 2 1 2 0 0 0 1 0 1 2 0 1 0 3 4 1 0 0 2 0 0 21 1 2211.1318 O15085 O15085 241 261 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 3 0.013557 68.525 By matching By MS/MS 1 1 12078000 6471100 5606800 4329 1472 4950 10988;10989 10732;10733 10732 2746;7298 2 NSWDSPAFSNDVIR QTYHKEARNSWDSPAF AFSNDVIRKRHYRIGL R N S I R K 1 1 2 2 0 0 0 0 0 1 0 0 0 1 1 3 0 1 0 1 0 0 14 0 1606.7376 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 497 510 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2 0.00087846 95.618 By MS/MS By matching 1 1 22087000 10587000 11499000 4330 91 4951 10990;10991 10734 10734 161 1 NSYNNSQAPSPGLGSK KTLTEHLKNSYNNSQA PSPGLGSKAVGMPSPV K N S S K A 1 0 3 0 0 1 0 2 0 0 1 1 0 0 2 4 0 0 1 0 0 0 16 0 1619.754 Q9UHB7 Q9UHB7 1034 1049 AFF4 AF4/FMR2 family member 4 yes yes 2 1.3172E-32 171.87 By MS/MS By matching 1 1 25267000 14221000 11047000 4331 3004 4952 10992;10993 10735;10736 10736 6331 2 NSYVMPNEPTTSNLQVGLWPEKTSFLQK QESVGISKNSYVMPNE EKTSFLQKSDLTSKLH K N S Q K S 0 0 3 0 0 2 2 1 0 0 3 2 1 1 3 3 3 1 1 2 0 0 28 1 3207.591 Q68DQ2 Q68DQ2 2195 2222 CRYBG3 Very large A-kinase anchor protein yes yes 3 0.014248 45.579 By MS/MS 1 29835000 29835000 0 4332 2296 4953 10994 10737 10737 4618;4619 1 NTDETSMKNDNK N T N K 0 0 3 2 0 0 1 0 0 0 0 2 1 0 0 1 2 0 0 0 0 0 12 1 1395.5936 REV__Q6ZS30 yes yes 2 0.0081716 74.165 By MS/MS By MS/MS 1 1 73387000 40400000 32987000 + 4333 3214 4954 10995;10996 10738;10739 10738 1263 2 NTDSWAPPLEIVNHRSPSR ELPGEIIKNTDSWAPP VNHRSPSREKKRARWE K N T S R E 1 2 2 1 0 0 1 0 1 1 1 0 0 0 3 3 1 1 0 1 0 0 19 1 2175.0821 Q9NRR4;H0YB67 Q9NRR4 340 358 DROSHA Ribonuclease 3 yes no 3 0.000502 83.252 By MS/MS By MS/MS 1 1 13225000 6879400 6345700 4334 2910 4955 10997;10998 10740;10741 10740 6137 2 NTGIICTIGPASR DSPPITARNTGIICTI CTIGPASRSVETLKEM R N T S R S 1 1 1 0 1 0 0 2 0 3 0 0 0 0 1 1 2 0 0 0 0 0 13 0 1358.6976 P14618;B4DNK4;H3BTN5;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13 P14618 44 56 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 2 0.0036598 88.803 By MS/MS By MS/MS 1 1 11890000 6644800 5245500 4335 1700 4956 10999;11000 10742;10743 10743 2 NTGVSPASRPSPGTPTSPSNLTSGLK SSLTSVMKNTGVSPAS SNLTSGLKTPAPATTT K N T L K T 1 1 2 0 0 0 0 3 0 0 2 1 0 0 5 6 4 0 0 1 0 0 26 1 2509.2772 Q5VT52 Q5VT52 469 494 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.019967 47.546 By MS/MS By matching 1 1 85597000 41500000 44097000 4336 2264 4957 11001;11002 10744 10744 4541;7652 1 NTMEHVSSSEESIISQETYKQEK ________________ QETYKQEKNMAINPSK K N T E K N 0 0 1 0 0 2 5 0 1 2 0 2 1 0 0 5 2 0 1 1 0 0 23 1 2683.2283 CON__P02663 CON__P02663 2 24 yes yes 2 0.032229 44.132 By MS/MS 1 0 0 0 + 4337 712 4958 11003 10745 10745 1 NTPSPDVTLGTNPGTEDIQFPIQK QGTNQIQKNTPSPDVT DIQFPIQKIPLGLDLK K N T Q K I 0 0 2 2 0 2 1 2 0 2 1 1 0 1 4 1 4 0 0 1 0 0 24 0 2568.2708 M0R3F6;M0R2Z9;Q8IX01 M0R3F6 274 297 SUGP2 SURP and G-patch domain-containing protein 2 yes no 3 0.024369 42.941 By MS/MS 1 10802000 0 10802000 4338 1424 4959 11004 10746 10746 1 NTPSQHSHSIQHSPER LSTVHSAKNTPSQHSH SIQHSPERSGSGSVGN K N T E R S 0 1 1 0 0 2 1 0 3 1 0 0 0 0 2 4 1 0 0 0 0 0 16 0 1840.8565 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 256 271 BCLAF1 Bcl-2-associated transcription factor 1 no no 3;4 6.9444E-05 105.92 By matching By MS/MS 2 4 727260000 54314000 672950000 4339 2947;888 4960 11005;11006;11007;11008;11009;11010 10747;10748;10749;10750 10748 1655;1656 4 NTQIIIQEESGIPK VKSARIARNTQIIIQE QEESGIPKVADPWGGS R N T P K V 0 0 1 0 0 2 2 1 0 4 0 1 0 0 1 1 1 0 0 0 0 0 14 0 1568.841 P22033 P22033 407 420 MUT Methylmalonyl-CoA mutase, mitochondrial yes yes 3 0.009342 58.04 By MS/MS 1 65653000 0 65653000 4340 1745 4961 11011 10751 10751 3284 1 NTQLLELTTKRIEEQSLHDVLFELSK YACKLFRRNTQLLELT DVLFELSKTVLRHSGS R N T S K T 0 1 1 1 0 2 4 0 1 1 6 2 0 1 0 2 3 0 0 1 0 0 26 2 3083.6503 H0Y8F0;H0Y547;E9PEJ6;P98196 H0Y8F0 128 153 ATP11A Phospholipid-transporting ATPase;Probable phospholipid-transporting ATPase IH yes no 3 0.010787 52.909 By MS/MS 1 6646400 6646400 0 4341 857 4962 11012 10752 10752 7104 1 NTSLPPLWSPEAER DKDITVSKNTSLPPLW LWSPEAERSHSLSQHT K N T E R S 1 1 1 0 0 0 2 0 0 0 2 0 0 0 3 2 1 1 0 0 0 0 14 0 1595.7944 P49790 P49790 201 214 NUP153 Nuclear pore complex protein Nup153 yes yes 2 2.313E-53 191.89 By MS/MS By MS/MS 2 2 97866000 53947000 43919000 4342 1859 4963 11013;11014;11015;11016 10753;10754;10755;10756;10757;10758 10757 3592;3593 6 NTSNIPVILEPETEESENEFYIK VHLRKSTRNTSNIPVI SENEFYIKQKKARPSV R N T I K Q 0 0 3 0 0 0 6 0 0 3 1 1 0 1 2 2 2 0 1 1 0 0 23 0 2694.2912 Q6P0N0 Q6P0N0 809 831 MIS18BP1 Mis18-binding protein 1 yes yes 2 0.010427 51.265 By MS/MS 1 4932400 0 4932400 4343 2312 4964 11017 10759 10759 7661;8375 1 NTSPTTQPTASGAGAPVMTGAGESTNPENSELK SNSDDCSKNTSPTTQP NPENSELKYSGQDGLY K N T L K Y 4 0 3 0 0 1 3 4 0 0 1 1 1 0 4 4 6 0 0 1 0 0 33 0 3201.4732 Q92908 Q92908 529 561 GATA6 Transcription factor GATA-6 yes yes 3 0.0014529 53.665 By MS/MS 1 15899000 15899000 0 4344 2609 4965 11018 10760 10760 1044 5361 1 NTSSDNSDVEVMPAQSPR VVGKKRKRNTSSDNSD VMPAQSPREDEESSIQ R N T P R E 1 1 2 2 0 1 1 0 0 0 0 0 1 0 2 4 1 0 0 2 0 0 18 0 1932.8483 Q9HCK8 Q9HCK8 547 564 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 2 0.00080469 80.522 By MS/MS By MS/MS 2 2 31623000 19168000 12455000 4345 2877 4966;4967 11019;11020;11021;11022 10761;10762;10763;10764 10762 1139 6059;6060;7864 4 NTYNQTALDIVNQFTTSQASREIKQLLR GGVDVNIRNTYNQTAL REIKQLLREASGILKV R N T L R E 2 2 3 1 0 4 1 0 0 2 3 1 0 1 0 2 4 0 1 1 0 0 28 2 3251.6899 Q8WXE0;J3QRN1 Q8WXE0 251 278 CASKIN2 Caskin-2 yes no 3 0.02753 47.105 By MS/MS 1 4650800 4650800 0 4346 2568 4968 11023 10765 10765 0 NVAEALGHSPKDPGGGGGPVR PSPIAALKNVAEALGH GGGGGPVRAGGASPAA K N V V R A 2 1 1 1 0 0 1 6 1 0 1 1 0 0 3 1 0 0 0 2 0 0 21 1 1970.9922 Q8IU81 Q8IU81 428 448 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 3 0.00088517 71.376 By MS/MS By MS/MS 1 1 34729000 17421000 17307000 4347 2424 4969 11024;11025 10766;10767 10767 4959 2 NVALLSQLYHSPAR AANPNQNKNVALLSQL QLYHSPARRFGGPVHH K N V A R R 2 1 1 0 0 1 0 0 1 0 3 0 0 0 1 2 0 0 1 1 0 0 14 0 1567.8471 Q15717 Q15717 192 205 ELAVL1 ELAV-like protein 1 yes yes 2;3 2.0077E-08 134.93 By MS/MS By MS/MS 1 1 37903000 33510000 4393700 4348 2152 4970 11026;11027 10768;10769 10768 4274 2 NVALLSQLYHSPARR AANPNQNKNVALLSQL LYHSPARRFGGPVHHQ K N V R R F 2 2 1 0 0 1 0 0 1 0 3 0 0 0 1 2 0 0 1 1 0 0 15 1 1723.9482 Q15717 Q15717 192 206 ELAVL1 ELAV-like protein 1 yes yes 3 0.0048431 66.777 By MS/MS By MS/MS 1 1 25627000 10566000 15061000 4349 2152 4971 11028;11029 10770;10771;10772 10772 4274 3 NVIPDTPPSTPLVPSR DKQKVRDRNVIPDTPP STPLVPSRASSEWDIK R N V S R A 0 1 1 1 0 0 0 0 0 1 1 0 0 0 5 2 2 0 0 2 0 0 16 0 1688.9097 Q9UKA4 Q9UKA4 1095 1110 AKAP11 A-kinase anchor protein 11 yes yes 2 0.00084581 109.16 By MS/MS By MS/MS 2 2 37225000 22003000 15221000 4350 3021 4972;4973 11030;11031;11032;11033 10773;10774;10775 10774 6366;7908 3 NVKLYDMVLQFLRTLFLR RLTRMVGKNVKLYDMV FLRTLFLRTRNVHYCT K N V L R T 0 2 1 1 0 1 0 0 0 0 5 1 1 2 0 0 1 0 1 2 0 0 18 2 2268.2817 A0A0X1KG71;Q8WX92 A0A0X1KG71 259 276 NELFB Negative elongation factor B yes no 3 0.029524 41.912 By MS/MS By matching 1 1 27539000 10997000 16541000 4351 402 4974 11034;11035 10776 10776 0 NVLASASADNTVILWDMSLGK LSWNKLIRNVLASASA LWDMSLGKPAASLAVH R N V G K P 3 0 2 2 0 0 0 1 0 1 3 1 1 0 0 3 1 1 0 2 0 0 21 0 2204.1147 Q13610;B4DJV5 Q13610 270 290 PWP1 Periodic tryptophan protein 1 homolog yes no 3 0.030323 41.292 By MS/MS 1 0 0 0 4352 2071 4975 11036 10777 10777 829 1 NVMSAFGLTDDQVSGPPSAPAEDR KNQDEINKNVMSAFGL PSAPAEDRSGTPDSIA K N V D R S 3 1 1 3 0 1 1 2 0 0 1 0 1 1 3 3 1 0 0 2 0 0 24 0 2460.1227 Q92734 Q92734 180 203 TFG Protein TFG yes yes 3 0.00068333 68.269 By MS/MS By MS/MS 1 1 33766000 15583000 18183000 4353 2598 4976 11037;11038 10778;10779 10779 1038 5337 2 NVNVQNFHTSWK QRKTAPYRNVNVQNFH QNFHTSWKDGLALCAL R N V W K D 0 0 3 0 0 1 0 0 1 0 0 1 0 1 0 1 1 1 0 2 0 0 12 0 1472.7161 A0A087WSZ2;Q08043 A0A087WSZ2 220 231 ACTN3 Alpha-actinin-3 yes no 2 0.0082183 81.709 By MS/MS 1 6767200 6767200 0 4354 27 4977 11039 10780 10780 56;6838 0 NVPHEDICEDSDIDGDYR DEHLLKRRNVPHEDIC SDIDGDYRVQNTSLEA R N V Y R V 0 1 1 5 1 0 2 1 1 2 0 0 0 0 1 1 0 0 1 1 0 0 18 0 2147.8702 O00629 O00629 50 67 KPNA4 Importin subunit alpha-3 yes yes 3 0.0012208 72.158 By MS/MS By MS/MS 1 1 21723000 10262000 11460000 4355 1444 4978 11040;11041 10781;10782 10781 2659 2 NVPPGLDEYNPFSDSR PSVTQVTRNVPPGLDE YNPFSDSRTPPPGGVK R N V S R T 0 1 2 2 0 0 1 1 0 0 1 0 0 1 3 2 0 0 1 1 0 0 16 0 1805.822 A0A087WZA6;O15126 A0A087WZA6 39 54 SCAMP1 Secretory carrier-associated membrane protein 1 yes no 2 0.0078463 73.082 By MS/MS By matching 1 1 12432000 7281200 5151100 4356 138 4979 11042;11043 10783 10783 226 1 NVPQEESLEDSDVDADFK DEHLLKKRNVPQEESL SDVDADFKAQNVTLEA R N V F K A 1 0 1 4 0 1 3 0 0 0 1 1 0 1 1 2 0 0 0 2 0 0 18 0 2035.8858 O00505 O00505 50 67 KPNA3 Importin subunit alpha-4 yes yes 2;3 1.1367E-64 192.22 By MS/MS By MS/MS 3 3 376900000 201150000 175750000 4357 1439 4980;4981 11044;11045;11046;11047;11048;11049 10784;10785;10786;10787;10788;10789;10790;10791;10792;10793;10794 10784 2641;2642 10 NVSAGTQDVPSPPSDYVER PNVEEWVKNVSAGTQD PPSDYVERVDSPMAYS K N V E R V 1 1 1 2 0 1 1 1 0 0 0 0 0 0 3 3 1 0 1 3 0 0 19 0 2016.9389 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 300 318 OCLN Occludin yes no 2;3 6.8913E-23 155.09 By MS/MS By MS/MS 2 1 33560000 21842000 11719000 4358 357 4982 11050;11051;11052 10795;10796;10797;10798;10799 10799 8029 4 NVSENYCHGSLLLFPRR FHWDLYSRNVSENYCH SLLLFPRRLEYL____ R N V R R L 0 2 2 0 1 0 1 1 1 0 3 0 0 1 1 2 0 0 1 1 0 0 17 1 2061.0214 A0A1B0GUX7 A0A1B0GUX7 809 825 yes yes 3 0.024285 58.123 By MS/MS 1 0 0 0 4359 423 4983 11053 10800 10800 793 1 NVSPEFVPCEGEGGFGLHK KHLNSLPRNVSPEFVP EGGFGLHKKKDLLSDN R N V H K K 0 0 1 0 1 0 3 4 1 0 1 1 0 2 2 1 0 0 0 2 0 0 19 0 2058.9469 O94986 O94986 1459 1477 CEP152 Centrosomal protein of 152 kDa yes yes 3 0.00063581 76.889 By matching By MS/MS 1 1 8797600 1235500 7562100 4360 1577 4984 11054;11055 10801 10801 2988 1 NVSSFPDDATSPLQENR DDQMLKRRNVSSFPDD TSPLQENRNNQGTVNW R N V N R N 1 1 2 2 0 1 1 0 0 0 1 0 0 1 2 3 1 0 0 1 0 0 17 0 1875.8599 J3QLL0;J3KS65;P52292 J3QLL0 52 68 KPNA2 Importin subunit alpha-1 yes no 2;3 3.4708E-142 243.61 By MS/MS By MS/MS 2 2 317060000 174980000 142080000 4361 1338 4985 11056;11057;11058;11059 10802;10803;10804;10805;10806;10807 10803 2478;7251 5 NVTELNEPLSNEER DDMAAAMKNVTELNEP EPLSNEERNLLSVAYK K N V E R N 0 1 3 0 0 0 4 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1642.7798 P61981 P61981 29 42 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 0.00028518 121.29 By MS/MS By MS/MS 1 1 14518000 5483300 9034200 4362 1932 4986 11060;11061 10808;10809;10810 10809 3 NVYATTVGTPYK DRLKKYEKNVYATTVG TTVGTPYKGGNLYHTD K N V Y K G 1 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 3 0 2 2 0 0 12 0 1312.6663 Q13439;H0Y6I0 Q13439 2146 2157 GOLGA4 Golgin subfamily A member 4 yes no 2 0.0095403 79.201 By MS/MS By matching 1 1 24688000 11120000 13568000 4363 2060 4987 11062;11063 10811 10811 8329 1 NWDSLIPDEMPDSPIQEK GGVTDVIKNWDSLIPD PDSPIQEKSECQDMSL K N W E K S 0 0 1 3 0 1 2 0 0 2 1 1 1 0 3 2 0 1 0 0 0 0 18 0 2112.9674 O95613 O95613 2165 2182 PCNT Pericentrin yes yes 2 0.00045349 88.781 By MS/MS By MS/MS 1 1 26086000 14238000 11849000 4364 1600 4988 11064;11065 10812;10813 10812 576 3034 1 NWEDEDFYDSDDDTFLDR VSRKRKAKNWEDEDFY DDDTFLDRTGLIEKKR K N W D R T 0 1 1 7 0 0 2 0 0 0 1 0 0 2 0 1 1 1 1 0 0 0 18 0 2295.8716 A0A087WWF4;A0A087X0M4;Q9BWU0 A0A087WWF4 227 244 SLC4A1AP Kanadaptin yes no 2 0 324.39 By MS/MS 1 0 0 0 4365 88 4989 11066 10814 10814 156 1 NWGAVVRSPEGTPQK AFAVGVEKNWGAVVRS SPEGTPQKIRQLIDEG K N W Q K I 1 1 1 0 0 1 1 2 0 0 0 1 0 0 2 1 1 1 0 2 0 0 15 1 1624.8322 C9J0I9;Q86WB0;F8WAU5;F8WBD7;F8WDK5;F8WF13 C9J0I9 17 31 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 0.00084524 98.408 By MS/MS By MS/MS 2 2 51384000 30030000 21353000 4366 624 4990;4991 11067;11068;11069;11070 10815;10816;10817 10817 1155;7010 3 NWTEDMEGGISSPVK SSPTSSSRNWTEDMEG GGISSPVKKTEMDKSP R N W V K K 0 0 1 1 0 0 2 2 0 1 0 1 1 0 1 2 1 1 0 1 0 0 15 0 1648.7403 P08651 P08651 312 326 NFIC Nuclear factor 1 C-type yes yes 2 4.1416E-34 172.57 By MS/MS By MS/MS 1 1 21174000 9011500 12162000 4367 1662 4992 11071;11072 10818;10819;10820 10820 613 3132;3133 3 NWTEDMEGGISSPVKK SSPTSSSRNWTEDMEG GISSPVKKTEMDKSPF R N W K K T 0 0 1 1 0 0 2 2 0 1 0 2 1 0 1 2 1 1 0 1 0 0 16 1 1776.8352 P08651 P08651 312 327 NFIC Nuclear factor 1 C-type yes yes 2 0.022507 64.565 By matching By MS/MS 1 1 14158000 6492900 7665200 4368 1662 4993 11073;11074 10821 10821 3132;3133 1 NYGSYSTQASAAAATAELLK KLSPTEPKNYGSYSTQ AATAELLKKQEELNRK K N Y L K K 6 0 1 0 0 1 1 1 0 0 2 1 0 0 0 3 2 0 2 0 0 0 20 0 2015.98 O14828 O14828 82 101 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2;3 3.5014E-119 226.79 By MS/MS By MS/MS 4 5 201910000 110680000 91230000 4369 1458 4994;4995 11075;11076;11077;11078;11079;11080;11081;11082;11083 10822;10823;10824;10825;10826;10827 10826 2713;2714;8186;8187 5 NYGSYSTQASAAAATAELLKK KLSPTEPKNYGSYSTQ ATAELLKKQEELNRKA K N Y K K Q 6 0 1 0 0 1 1 1 0 0 2 2 0 0 0 3 2 0 2 0 0 0 21 1 2144.075 O14828 O14828 82 102 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 3 8.2308E-05 112.14 By MS/MS By MS/MS 1 1 11081000 7011700 4069000 4370 1458 4996 11084;11085 10828;10829;10830 10829 2713;2714;8186;8187 3 NYGYNPSPVKPEGLR SVVTESSRNYGYNPSP PVKPEGLRRPPSKTSM R N Y L R R 0 1 2 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 2 1 0 0 15 1 1689.8475 E9PRF4;Q15047 E9PRF4 1060 1074 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes no 2;3 4.5358E-07 132.51 By MS/MS By MS/MS 2 2 65884000 35647000 30237000 4371 929 4997 11086;11087;11088;11089 10831;10832;10833;10834 10834 1730 4 NYQNGDVFGDEYR EEEAQKGKNYQNGDVF DVFGDEYRIKPVEEVK K N Y Y R I 0 1 2 2 0 1 1 2 0 0 0 0 0 1 0 0 0 0 2 1 0 0 13 0 1575.659 Q9H246 Q9H246 23 35 C1orf21 Uncharacterized protein C1orf21 yes yes 2 9.4227E-05 99.283 By matching By MS/MS 1 1 7493200 3592000 3901200 4372 2817 4998 11090;11091 10835 10835 132 8458 0 NYQQNYQNSESGEKNEGSESAPEGQAQQR PRRRGPPRNYQQNYQN PEGQAQQRRPYRRRRF R N Y Q R R 2 1 4 0 0 6 5 3 0 0 0 1 0 0 1 4 0 0 2 0 0 0 29 1 3256.3889 H0Y449;P67809;C9J5V9 H0Y449 207 235 YBX1 Nuclease-sensitive element-binding protein 1 yes no 3;4 1.1124E-09 95.519 By MS/MS By MS/MS 3 3 590700000 290720000 299980000 4373 1117 4999 11092;11093;11094;11095;11096;11097 10836;10837;10838;10839;10840;10841 10839 2115;2116;2117;8149 6 NYQSQADIPIRSPFGIVK VGSRGSKKNYQSQADI RSPFGIVKASWLPKFS K N Y V K A 1 1 1 1 0 2 0 1 0 3 0 1 0 1 2 2 0 0 1 1 0 0 18 1 2032.0742 Q14966;A0A096LPH6 Q14966 372 389 ZNF638 Zinc finger protein 638 yes no 2;3 1.0523E-42 172.99 By MS/MS By MS/MS 2 2 104930000 58947000 45985000 4374 2110 5000 11098;11099;11100;11101 10842;10843;10844;10845 10842 4176 4 NYSREQHGVAASCLEDLR LKPCLLRRNYSREQHG ASCLEDLRSKACDILA R N Y L R S 2 2 1 1 1 1 2 1 1 0 2 0 0 0 0 2 0 0 1 1 0 0 18 1 2103.9756 O00273;K7ERT1 O00273 26 43 DFFA DNA fragmentation factor subunit alpha yes no 3 0.0071267 59.618 By MS/MS By MS/MS 1 1 30899000 14877000 16022000 4375 1432 5001 11102;11103 10846;10847 10847 2630 2 NYSVGSRPLKPLSPLR SNTIRRPRNYSVGSRP LKPLSPLRAQDMQEGA R N Y L R A 0 2 1 0 0 0 0 1 0 0 3 1 0 0 3 3 0 0 1 1 0 0 16 2 1783.0105 O60825 O60825 481 496 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 3 0.01177 69.612 By MS/MS By MS/MS 1 1 49108000 27572000 21536000 4376 1529 5002 11104;11105 10848;10849 10849 2886;2887 2 NYYEQWGK ETTEESLRNYYEQWGK NYYEQWGKLTDCVVMR R N Y G K L 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 1 2 0 0 0 8 0 1086.4771 P22626;A0A087WUI2 P22626 39 46 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.02858 80.229 By matching By MS/MS 1 1 10200000 5489100 4710400 4377 1749 5003 11106;11107 10850 10850 1 PAAAAAAGSASPR GRKGSGKRPAAAAAAG AAGSASPRSWDEAEAQ R P A P R S 7 1 0 0 0 0 0 1 0 0 0 0 0 0 2 2 0 0 0 0 0 0 13 0 1096.5625 Q96S55 Q96S55 143 155 WRNIP1 ATPase WRNIP1 yes yes 2 0.00058369 95.273 By MS/MS By matching 1 1 7259100 4190600 3068500 4378 2708 5004 11108;11109 10851 10851 5588 0 PAASPLTSLR GFTSPAFKPAASPLTS ASPLTSLRQYPPRSRN K P A L R Q 2 1 0 0 0 0 0 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 10 0 1011.5713 Q92615 Q92615 395 404 LARP4B La-related protein 4B yes yes 2 0.017037 67.385 By matching By MS/MS 1 1 24894000 12815000 12079000 4379 2587 5005 11110;11111 10852 10852 5318 1 PAEKPAETPVATSPTATDSTSGDSSR ASAAKQEKPAEKPAET STSGDSSRSNLFEDAT K P A S R S 4 1 0 2 0 0 2 1 0 0 0 1 0 0 4 5 5 0 0 1 0 0 26 1 2559.1936 H0Y579;P54727 H0Y579 18 43 RAD23B UV excision repair protein RAD23 homolog B yes no 3 0.028299 41.06 By matching By MS/MS 1 1 13366000 8059100 5306400 4380 1128 5006 11112;11113 10853 10853 2144;7196 1 PAGATLERPK EGPLPAARPAGATLER GATLERPKTLSPGKNG R P A P K T 2 1 0 0 0 0 1 1 0 0 1 1 0 0 2 0 1 0 0 0 0 0 10 1 1038.5822 B4DTR1;P04626 B4DTR1 886 895 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 yes no 2 0.029876 76.165 By MS/MS By matching 1 1 10531000 5677500 4853100 4381 563 5007 11114;11115 10854 10854 0 PALLHSQFLTPPQTPTPGESMEDVHLNEPK SDGPACKRPALLHSQF DVHLNEPKQESSADLL R P A P K Q 1 0 1 1 0 2 3 1 2 0 4 1 1 1 6 2 3 0 0 1 0 0 30 0 3309.634 C9J5I7;C9JZ23;Q9BYH8 C9J5I7 80 109 NFKBIZ NF-kappa-B inhibitor zeta yes no 3 0.020118 42.166 By MS/MS 1 88523000 0 88523000 4382 638 5008 11116 10855 10855 251 1193 1 PAPAPPLYSSLT QGNLIPARPAPAPPLY PPLYSSLT________ R P A L T - 2 0 0 0 0 0 0 0 0 0 2 0 0 0 4 2 1 0 1 0 0 0 12 0 1212.639 A0A0J9YY58;Q13443 A0A0J9YY58 42 53 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes no 2 0.0031321 113.41 By MS/MS By MS/MS 1 1 0 0 0 4383 373 5009 11117;11118 10856;10857 10857 691;8036 2 PAPPPPPPPLTLVLSSGPASPPR LPVVGVVRPAPPPPPP SGPASPPRQAIRVKRV R P A P R Q 2 1 0 0 0 0 0 1 0 0 3 0 0 0 11 3 1 0 0 1 0 0 23 0 2241.2521 Q9UMN6 Q9UMN6 2251 2273 KMT2B Histone-lysine N-methyltransferase 2B yes yes 3 9.3571E-06 96.181 By MS/MS By MS/MS 1 1 13340000 7695000 5645100 4384 3054 5010 11119;11120 10858;10859 10858 6442 2 PAPPPQSQSPEVEQLGR LQMALNGKPAPPPQSQ PEVEQLGRVVELDSDM K P A G R V 1 1 0 0 0 3 2 1 0 0 1 0 0 0 5 2 0 0 0 1 0 0 17 0 1815.9115 P52948 P52948 926 942 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 2;3 0.00023389 93.215 By MS/MS By matching 2 1 37883000 27601000 10281000 4385 1893 5011 11121;11122;11123 10860;10861 10860 3667 2 PAPPQEESPSSEAK PSGQVGPRPAPPQEES ESPSSEAKSRGPTPPA R P A A K S 2 0 0 0 0 1 3 0 0 0 0 1 0 0 4 3 0 0 0 0 0 0 14 0 1452.6733 Q3KQU3;C9JIR3;E9PLH3 Q3KQU3 79 92 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.019322 65.565 By MS/MS By matching 1 1 33950000 32167000 1783200 4386 2187 5012 11124;11125 10862 10862 4354 1 PASPEAGNTLR FLQDGPARPASPEAGN PEAGNTLRRWRCHVQR R P A L R R 2 1 1 0 0 0 1 1 0 0 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1111.5622 Q9UJX6 Q9UJX6 312 322 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 2 7.7033E-06 105.03 By matching By MS/MS 1 1 15518000 8849100 6668900 4387 3015 5013 11126;11127 10863 10863 6346 0 PATPAEDDEDDDIDLFGSDNEEEDKEAAQLR QVEPPAKKPATPAEDD DKEAAQLREERLRQYA K P A L R E 4 1 1 8 0 1 6 1 0 1 2 1 0 1 2 1 1 0 0 0 0 0 31 1 3448.455 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;H0YE72 E9PL71 121 151 EEF1D Elongation factor 1-delta yes no 3 0.00022126 63.291 By MS/MS By matching 1 1 83902000 42537000 41364000 4388 172 5014 11128;11129 10864 10864 280 1 PATTTVDSIQAPIPSHTAPR PELAMAVRPATTTVDS IPSHTAPRPNPTPAPP R P A P R P 3 1 0 1 0 1 0 0 1 2 0 0 0 0 4 2 4 0 0 1 0 0 20 0 2059.0698 Q9H3S7 Q9H3S7 879 898 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 3 0.021559 51.089 By MS/MS 1 1789100 1789100 0 4389 2829 5015 11130 10865 10865 5936;5937 0 PCSEETPAISPSKR ________________ PAISPSKRARPAEVGG M P C K R A 1 1 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 14 1 1557.7457 H0YNJ9 H0YNJ9 2 15 DUT yes yes 3 0.0010321 83.751 By MS/MS By MS/MS 1 1 54751000 29772000 24979000 4390 1219 5016 11131;11132 10866;10867;10868;10869 10868 2280 4 PDFPGPRHTDPMRR RHGNFIPRPDFPGPRH RHTDPMRRPPQGLPNQ R P D R R P 0 3 0 2 0 0 0 1 1 0 0 0 1 1 4 0 1 0 0 0 0 0 14 2 1677.8158 Q8NEZ4;H7BY37 Q8NEZ4 2597 2610 KMT2C Histone-lysine N-methyltransferase 2C yes no 2 0.0080107 68.893 By MS/MS By MS/MS 1 1 104440000 54557000 49879000 4391 2515 5017 11133;11134 10870;10871 10871 1014 7737 1 PDLITCLEQGKDPWNMKR FLGIDVSKPDLITCLE KDPWNMKRHSMVATPP K P D K R H 0 1 1 2 1 1 1 1 0 1 2 2 1 0 2 0 1 1 0 0 0 0 18 2 2200.0769 E9PE46;M0R0N2;Q8NE65 E9PE46 81 98 ZNF738 Protein ZNF738 yes no 3 0.032356 52.03 By MS/MS By matching 2 1 20175000 13698000 6478000 4392 855 5018 11135;11136;11137 10872 10872 323 1 PEATPSMASLGPEGKLRPEPR PGPPRPHRPEATPSMA GKLRPEPRRDGEAQEA R P E P R R 2 2 0 0 0 0 3 2 0 0 2 1 1 0 5 2 1 0 0 0 0 0 21 2 2219.1369 B5MEB3 B5MEB3 427 447 CABIN1 yes yes 3 0.029598 45.916 By MS/MS 1 0 0 0 4393 584 5019 11138 10873 10873 235 1 PEECSCSKQSYYNKEK RGHLKRRKPEECSCSK QSYYNKEKGVKKQEKL K P E E K G 0 0 1 0 2 1 3 0 0 0 0 3 0 0 1 3 0 0 2 0 0 0 16 2 2035.8615 H0YDR1;A0A087WWR8;Q8IWU6 H0YDR1 13 28 SULF1 Extracellular sulfatase Sulf-1 yes no 3 0.029708 50.957 By MS/MS 1 0 0 0 4394 97 5020 11139 10874 10874 176;177;7985;7986 1 PEPEPSSSNKK NPEDVPRRPEPEPSSS EPSSSNKKKKKRKWLR R P E K K K 0 0 1 0 0 0 2 0 0 0 0 2 0 0 3 3 0 0 0 0 0 0 11 1 1198.583 A2A3L6 A2A3L6 13 23 TTC24 Tetratricopeptide repeat protein 24 yes yes 3 0.025262 46.001 By MS/MS 1 0 0 0 4395 452 5021 11140 10875 10875 843;844;845 1 PEVSPLNMESEPNSPQTQDK RCCGLETKPEVSPLNM NSPQTQDKGCQTQQQP K P E D K G 0 0 2 1 0 2 3 0 0 0 1 1 1 0 4 3 1 0 0 1 0 0 20 0 2226.011 P49901 P49901 78 97 SMCP Sperm mitochondrial-associated cysteine-rich protein yes yes 3 0.032112 40.515 By MS/MS 1 0 0 0 4396 1863 5022 11141 10876 10876 725 1 PFGSVSSPK MAYNKAPRPFGSVSSP FGSVSSPKVTSIPSPS R P F P K V 0 0 0 0 0 0 0 1 0 0 0 1 0 1 2 3 0 0 0 1 0 0 9 0 904.46543 Q96HC4;A0A0D9SFR4 Q96HC4 131 139 PDLIM5 PDZ and LIM domain protein 5 yes no 2 0.014309 72.434 By MS/MS By MS/MS 1 1 14042000 7184700 6857100 4397 2662 5023 11142;11143 10877;10878 10877 5491 2 PFSAPKPQTSPSPK GPVRSGPKPFSAPKPQ PQTSPSPKRATKKEPA K P F P K R 1 0 0 0 0 1 0 0 0 0 0 2 0 1 5 3 1 0 0 0 0 0 14 1 1467.7722 Q01518 Q01518 299 312 CAP1 Adenylyl cyclase-associated protein 1 yes yes 2 0.01658 80.737 By matching By MS/MS 1 1 8395200 4292700 4102600 4398 1980 5024 11144;11145 10879 10879 3801 0 PGFSIADK DFYVVLGRPGFSIADK PGFSIADKKRRTGCIG R P G D K K 1 0 0 1 0 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 0 0 8 0 833.42832 P62913;Q5VVC8 P62913 137 144 RPL11 60S ribosomal protein L11 yes no 2 0.019177 98.629 By MS/MS 1 3084300 3084300 0 4399 1949 5025 11146 10880 10880 1 PGGQAPSSPSYENSLHSLQSR TGTSQWPRPGGQAPSS SLHSLQSRMEDRLDRL R P G S R M 1 1 1 0 0 2 1 2 1 0 2 0 0 0 3 6 0 0 1 0 0 0 21 0 2198.0352 Q99081;B4DZP2 Q99081 379 399 TCF12 Transcription factor 12 yes no 3 9.7485E-05 106.31 By MS/MS By MS/MS 1 1 25798000 14677000 11121000 4400 2718 5026 11147;11148 10881;10882 10881 5643;5644 2 PGHLQFYSLQSDK KALVLNGKPGHLQFYS FYSLQSDKQLYNLDII K P G D K Q 0 0 0 1 0 2 0 1 1 0 2 1 0 1 1 2 0 0 1 0 0 0 13 0 1518.7467 Q8IWA0 Q8IWA0 355 367 WDR75 WD repeat-containing protein 75 yes yes 3 0.030975 44.807 By MS/MS 1 1951300 1951300 0 4401 2427 5027 11149 10883 10883 0 PGHVSPLQLTNIQVPQQALPTQR VQTSVQAKPGHVSPLQ QQALPTQRLVVQSAAP K P G Q R L 1 1 1 0 0 5 0 1 1 1 3 0 0 0 4 1 2 0 0 2 0 0 23 0 2521.3765 P22670 P22670 155 177 RFX1 MHC class II regulatory factor RFX1 yes yes 3 4.0699E-05 87.496 By MS/MS By MS/MS 1 1 15241000 8205100 7035400 4402 1750 5028 11150;11151 10884;10885 10885 3299 2 PGMYPDPHSPFAVSPIPGR IMLPLFARPGMYPDPH AVSPIPGRGGVLNVPI R P G G R G 1 1 0 1 0 0 0 2 1 1 0 0 1 1 6 2 0 0 1 1 0 0 19 0 2020.9829 P41162 P41162 237 255 ETV3 ETS translocation variant 3 yes yes 3 0.00044443 79.837 By MS/MS 1 14267000 0 14267000 4403 1815 5029 11152 10886 10886 687 3422;3423 1 PGNKPTSLDETSSK MMSSKTGKPGNKPTSL SLDETSSKVSNVHVSN K P G S K V 0 0 1 1 0 0 1 1 0 0 1 2 0 0 2 3 2 0 0 0 0 0 14 1 1459.7155 A4UGR9;A0A0A0MQZ3 A4UGR9 2867 2880 XIRP2 Xin actin-binding repeat-containing protein 2 yes no 2 0.020896 52.026 By matching By MS/MS 1 1 18996000 9279000 9717100 4404 462 5030 11153;11154 10887 10887 858 1 PGPTPSGTNVGSSGRSPSK ________________ SSGRSPSKAVAARAAG M P G S K A 0 1 1 0 0 0 0 4 0 0 0 1 0 0 4 5 2 0 0 1 0 0 19 1 1768.8704 P60468 P60468 2 20 SEC61B Protein transport protein Sec61 subunit beta yes yes 2;3 4.6196E-06 127.37 By MS/MS By MS/MS 2 2 500780000 289890000 210890000 4405 1927 5031 11155;11156;11157;11158 10888;10889;10890 10888 3719;3720 3 PGSDSRNYSITIRQEIDIPR SLGNMILRPGSDSRNY RQEIDIPRIKHYKVMS R P G P R I 0 3 1 2 0 1 1 1 0 4 0 0 0 0 2 3 1 0 1 0 0 0 20 2 2316.1822 Q9ULZ2 Q9ULZ2 204 223 STAP1 Signal-transducing adaptor protein 1 yes yes 3 0.015003 50.722 By MS/MS By matching 1 1 432920000 209110000 223810000 4406 3052 5032 11159;11160 10891 10891 6438;7912 1 PGTPSDHQSQEASQFER QTSSSSARPGTPSDHQ QEASQFERKDEPKTEQ R P G E R K 1 1 0 1 0 3 2 1 1 0 0 0 0 1 2 3 1 0 0 0 0 0 17 0 1899.8347 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1 I1E4Y6 402 418 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 0.011061 75.911 By MS/MS By matching 1 1 21190000 12085000 9104600 4407 1298 5033 11161;11162 10892 10892 2409;7240 1 PGWLSSPTLGR GGPLPLPRPGWLSSPT LSSPTLGRANRFLSTA R P G G R A 0 1 0 0 0 0 0 2 0 0 2 0 0 0 2 2 1 1 0 0 0 0 11 0 1169.6193 C9JS59;C9J266;Q5XPI4 C9JS59 670 680 RNF123 E3 ubiquitin-protein ligase RNF123 yes no 2 1.2167E-10 162.49 By MS/MS By MS/MS 1 1 61027000 32118000 28909000 4408 628 5034 11163;11164 10893;10894 10894 1176;1177 2 PIPNQPPTAAHTANFLLNASGSTSTPAPSR VGMALGHRPIPNQPPT TSTPAPSRTASFSESR R P I S R T 5 1 3 0 0 1 0 1 1 1 2 0 0 1 6 4 4 0 0 0 0 0 30 0 3014.521 P53396;K7EIE7 P53396 423 452 ACLY ATP-citrate synthase yes no 3 0.00040433 60.419 By MS/MS By matching 1 1 14174000 8188400 5985700 4409 1895 5035 11165;11166 10895 10895 3672;3673;7488 1 PISPGLSYASHTVGFTPPTSLTR TPSPSSSRPISPGLSY TPPTSLTRAGMSYYNS R P I T R A 1 1 0 0 0 0 0 2 1 1 2 0 0 1 4 4 4 0 1 1 0 0 23 0 2385.2329 Q16204 Q16204 365 387 CCDC6 Coiled-coil domain-containing protein 6 yes yes 3 0.00092241 67.251 By MS/MS By MS/MS 1 1 28175000 14685000 13490000 4410 2161 5036 11167;11168 10896;10897;10898 10896 4288 3 PISVGGNK VTNNFDERPISVGGNK PISVGGNKMGEGGFGV R P I N K M 0 0 1 0 0 0 0 2 0 1 0 1 0 0 1 1 0 0 0 1 0 0 8 0 770.42865 A0A0R4J2F4;Q9NWZ3 A0A0R4J2F4 184 191 IRAK4 Interleukin-1 receptor-associated kinase 4 yes no 2 0.016547 60.788 By MS/MS 1 0 0 0 4411 375 5037 11169 10899 10899 692 1 PLEGSSSEDSPPEGQAPPSHSPR QREDPQARPLEGSSSE APPSHSPRGTKRRASW R P L P R G 1 1 0 1 0 1 3 2 1 0 1 0 0 0 6 6 0 0 0 0 0 0 23 0 2344.0567 Q12789 Q12789 1836 1858 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 9.1898E-06 106.88 By MS/MS By MS/MS 1 1 31615000 17130000 14485000 4412 2025 5038 11170;11171 10900;10901;10902;10903 10901 3935;3936 4 PLKPLSPLR RNYSVGSRPLKPLSPL LKPLSPLRAQDMQEGA R P L L R A 0 1 0 0 0 0 0 0 0 0 3 1 0 0 3 1 0 0 0 0 0 0 9 1 1019.6492 O60825 O60825 488 496 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 2 0.015977 80.245 By MS/MS By matching 1 1 9900600 4589300 5311200 4413 1529 5039 11172;11173 10904 10904 2887 1 PLLMESEEEDESCRPPPGK MLDCSGSRPLLMESEE SCRPPPGKLGGAVPFA R P L G K L 0 1 0 1 1 0 5 1 0 0 2 1 1 0 4 2 0 0 0 0 0 0 19 1 2198.9824 A0A096LNZ0;A0A096LP25;Q6ZSR9 A0A096LNZ0 186 204 AAK1 Uncharacterized protein FLJ45252 yes no 3 0.00079764 81.713 By MS/MS 1 13022000 0 13022000 4414 181 5040 11174 10905 10905 76 304 1 PLPSPPK KTSSIQSRPLPSPPKF RPLPSPPKFTSQDSPD R P L P K F 0 0 0 0 0 0 0 0 0 0 1 1 0 0 4 1 0 0 0 0 0 0 7 0 734.43268 P56945 P56945 636 642 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 2 0.02607 88.37 By MS/MS By matching 1 1 10050000 3810300 6239800 4415 1919 5041 11175;11176 10906 10906 3713 1 PLSPGALQLAGEK KLSPQDPRPLSPGALQ ALQLAGEKSSEKGLRE R P L E K S 2 0 0 0 0 1 1 2 0 0 3 1 0 0 2 1 0 0 0 0 0 0 13 0 1279.7136 Q8TEK3 Q8TEK3 832 844 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 0.00079457 98.421 By MS/MS By MS/MS 1 1 19423000 10169000 9254500 4416 2544 5042 11177;11178 10907;10908 10907 5197 2 PLTSPLR TATPAEPRPLTSPLRQ RPLTSPLRQAADEDDK R P L L R Q 0 1 0 0 0 0 0 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 7 0 782.46504 P48634 P48634 805 811 PRRC2A Protein PRRC2A yes yes 2 0.025889 91.069 By MS/MS 1 79528000 0 79528000 4417 1846 5043 11179 10909 10909 3543;7460 1 PMRKTFVSQASATMQQYAQR FLCLRVGKPMRKTFVS TMQQYAQRDKKHEYWF K P M Q R D 3 2 0 0 0 4 0 0 0 0 0 1 2 1 1 2 2 0 1 1 0 0 20 2 2328.1467 Q8N573;H0YC07 Q8N573 566 585 OXR1 Oxidation resistance protein 1 yes no 3 0.028887 40.349 By matching By MS/MS 1 1 104860000 56110000 48748000 4418 2474 5044 11180;11181 10910 10910 1 PNINAVATLEKVIEIQSK DEAVLQQKPNINAVAT KVIEIQSKHWSCVQKF K P N S K H 2 0 2 0 0 1 2 0 0 3 1 2 0 0 1 1 1 0 0 2 0 0 18 1 1966.1099 Q9UQL6 Q9UQL6 1039 1056 HDAC5 Histone deacetylase 5 yes yes 2 0.014191 75.102 By MS/MS 1 0 0 0 4419 3079 5045 11182 10911 10911 6617 1 PNLSKNLNSQDIK KLNNCTKKPNLSKNLN NLNSQDIK________ K P N I K - 0 0 3 1 0 1 0 0 0 1 2 2 0 0 1 2 0 0 0 0 0 0 13 1 1469.7838 Q5SZJ8 Q5SZJ8 267 279 BEND6 BEN domain-containing protein 6 yes yes 2 0.021029 53.038 By MS/MS 1 3962800 0 3962800 4420 2234 5046 11183 10912 10912 4471;4472 1 PPEGFMAPKAWTVLTEYYKSLEK KLAREGQKPPEGFMAP EYYKSLEKA_______ K P P E K A 2 0 0 0 0 0 3 1 0 0 2 3 1 1 3 1 2 1 2 1 0 0 23 2 2684.356 O43252 O43252 601 623 PAPSS1 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes yes 2 0.011164 59.709 By MS/MS 1 2901000 2901000 0 4421 1491 5047 11184 10913 10913 2787;7311;8198 1 PPFAQIALQLGRMLEARK WRDRPYERPPFAQIAL GRMLEARKAYVNMSLF R P P R K A 3 2 0 0 0 2 1 1 0 1 3 1 1 1 2 0 0 0 0 0 0 0 18 2 2038.151 P35590 P35590 1098 1115 TIE1 Tyrosine-protein kinase receptor Tie-1 yes yes 2 0.03139 48.115 By MS/MS 1 0 0 0 4422 1797 5048 11185 10914 10914 680 1 PPPSMSAAGLAAR AISLGTARPPPSMSAA SAAGLAARMSQVPAPV R P P A R M 4 1 0 0 0 0 0 1 0 0 1 0 1 0 3 2 0 0 0 0 0 0 13 0 1224.6285 Q9UQ35 Q9UQ35 2195 2207 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 1 0.021425 45.368 By MS/MS 1 5735300 0 5735300 4423 3074 5049 11186 10915 10915 1230 6539;6540 1 PPRCSCSASPSAVTAAGRPR RPCSCALRPPRCSCSA VTAAGRPRPSDSCKEE R P P P R P 4 3 0 0 2 0 0 1 0 0 0 0 0 0 4 4 1 0 0 1 0 0 20 2 2084.0004 Q9UKT4 Q9UKT4 12 31 FBXO5 F-box only protein 5 yes yes 3 0.030632 44.816 By MS/MS 1 0 0 0 4424 3029 5050 11187 10916 10916 1 PQITINEISEITSIKKEDVISTLQYLNLINYYK LKSESGERPQITINEI LNLINYYKGQYILTLS R P Q Y K G 0 0 3 1 0 2 3 0 0 7 3 3 0 0 1 3 3 0 3 1 0 0 33 2 3883.087 E9PJI1;Q92993 E9PJI1 226 258 KAT5 Histone acetyltransferase;Histone acetyltransferase KAT5 yes no 3 0.012796 42.121 By MS/MS By matching 1 1 411290000 200710000 210580000 4425 891 5051 11188;11189 10917 10917 1669;1670;7118;8128 1 PQMNSEGEIPSLPSGSQSAKPVSQPR EVKEEGGKPQMNSEGE AKPVSQPRKSTQPDVC K P Q P R K 1 1 1 0 0 3 2 2 0 1 1 1 1 0 5 6 0 0 0 1 0 0 26 1 2707.3235 A0A087WUE6;Q3T8J9;A4PB68 A0A087WUE6 171 196 GON4L GON-4-like protein yes no 3 0.022293 46.403 By MS/MS By matching 1 1 16049000 6107300 9941700 4426 54 5052 11190;11191 10918 10918 96;97 1 PQQSASGNNESSQVESTK PDAAAKSKPQQSASGN SSQVESTKEGNPSTTA K P Q T K E 1 0 2 0 0 3 2 1 0 0 0 1 0 0 1 5 1 0 0 1 0 0 18 0 1876.8399 Q86TE4 Q86TE4 256 273 LUZP2 Leucine zipper protein 2 yes yes 3 0.025852 54.811 By MS/MS 1 0 0 0 4427 2398 5053 11192 10919 10919 4894 1 PQSKVAQDNMDVFKDQWEK AALTLAARPQSKVAQD VFKDQWEKQVRVLTEA R P Q E K Q 1 0 1 3 0 3 1 0 0 0 0 3 1 1 1 1 0 1 0 2 0 0 19 2 2292.0845 A0A0A0MTJ6;A0A0A0MRI5;P26232;B9A010 A0A0A0MTJ6 89 107 CTNNA2 Catenin alpha-2 no no 1 NaN 0 0 0 4428 217 0 PRSSTSYR LDMGRLHRPRSSTSYR PRSSTSYRNLPHLFLF R P R Y R N 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 1 0 0 0 8 1 952.47264 Q8N6Y1 Q8N6Y1 34 41 PCDH20 Protocadherin-20 yes yes 1 0.020063 70.399 By MS/MS 1 1630100 0 1630100 4429 2483 5054 11193 10920 10920 5072 0 PSDSVSSTPAATSTPSK VPLTPVPRPSDSVSST AATSTPSKQALQFFCY R P S S K Q 2 0 0 1 0 0 0 0 0 0 0 1 0 0 3 6 3 0 0 1 0 0 17 0 1618.7686 H0Y5D5;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3 H0Y5D5 494 510 CIZ1 Cip1-interacting zinc finger protein yes no 2 0.00033917 97.291 By MS/MS By MS/MS 1 1 15657000 8010800 7646600 4430 967 5055 11194;11195 10921;10922 10922 1820;7135;7136 2 PSIPRYVSGDALWGADRCDYGLK P S L K 2 2 0 3 1 0 0 3 0 1 2 1 0 0 2 2 0 1 2 1 0 0 23 2 2595.254 REV__P10915 yes yes 4 0.021571 40.81 By matching By MS/MS 1 1 19645000 7855400 11790000 + 4431 3203 5056 11196;11197 10923 10923 6798;6799 1 PSKSNSRNGAGNR LQYRSLPRPSKSNSRN SRNGAGNRSSTSSIDS R P S N R S 1 2 3 0 0 0 0 2 0 0 0 1 0 0 1 3 0 0 0 0 0 0 13 2 1343.6654 E9PNV5;A0A0A0MTL4;A0A0A0MTE8;Q8IVL1 E9PNV5 282 294 NAV2 Neuron navigator 2 yes no 3 0.028169 67.385 By MS/MS 1 0 0 0 4432 271 5057 11198 10924 10924 479 1 PSLPQQARPSPTSR P S S R 1 2 0 0 0 2 0 0 0 0 1 0 0 0 4 3 1 0 0 0 0 0 14 1 1520.8059 REV__P25054 yes yes 2 0.017714 51.466 By MS/MS 1 16770000 16770000 0 + 4433 3204 5058 11199 10925 10925 6800;6801;6802 1 PSMSPTPLDR SRMSCFSRPSMSPTPL MSPTPLDRCRSPGMLE R P S D R C 0 1 0 1 0 0 0 0 0 0 1 0 1 0 3 2 1 0 0 0 0 0 10 0 1099.5332 Q9UQ35 Q9UQ35 2120 2129 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.00013257 118.87 By MS/MS By MS/MS 2 2 134360000 74243000 60118000 4434 3074 5059;5060 11200;11201;11202;11203 10926;10927;10928;10929;10930;10931 10931 1229 6535;6536;7930 6 PSPGTPTSPSNLTSGLK TGVSPASRPSPGTPTS SNLTSGLKTPAPATTT R P S L K T 0 0 1 0 0 0 0 2 0 0 2 1 0 0 4 4 3 0 0 0 0 0 17 0 1639.8417 Q5VT52 Q5VT52 478 494 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 0.015129 64.534 By MS/MS By matching 1 1 9579600 4979400 4600200 4435 2264 5061 11204;11205 10932 10932 4541;7652 1 PSQGLPVIQSPPSSPPHR IGLQTEARPSQGLPVI PPSSPPHRDSAYISSS R P S H R D 0 1 0 0 0 2 0 1 1 1 1 0 0 0 6 4 0 0 0 1 0 0 18 0 1879.9904 Q9HCD6;A0A087WUE1 Q9HCD6 1433 1450 TANC2 Protein TANC2 yes no 3 0.0022778 85.013 By MS/MS By MS/MS 1 1 0 0 0 4436 2873 5062 11206;11207 10933;10934 10933 6050;6051 2 PSSINYMVAPVTGNDVGIR PLQGLVARPSSINYMV TGNDVGIRRAEIKQGI R P S I R R 1 1 2 1 0 0 0 2 0 2 0 0 1 0 2 2 1 0 1 3 0 0 19 0 1988.999 G5EA09;O00560 G5EA09 106 124 SDCBP Syntenin-1 yes no 2 0.0024924 68.168 By MS/MS By MS/MS 1 1 13378000 6866400 6511900 4437 1105 5063 11208;11209 10935;10936 10935 394 8146 2 PSSIPAPAEAEAWSPR SPGTTAPRPSSIPAPA EAEAWSPRKLPSSAST R P S P R K 4 1 0 0 0 0 2 0 0 1 0 0 0 0 4 3 0 1 0 0 0 0 16 0 1664.8158 H7C1F0;F8WAB6;D3YTB5;P51617 H7C1F0 114 129 IRAK1 Interleukin-1 receptor-associated kinase 1 yes no 2 0.0058802 75.574 By MS/MS By MS/MS 1 1 14396000 7802000 6593800 4438 724 5064 11210;11211 10937;10938 10937 1328 2 PSSLSDKTQLHSRWLDSSR LLLQRLPRPSSLSDKT SRWLDSSRCLMQQGIK R P S S R C 0 2 0 2 0 1 0 0 1 0 3 1 0 0 1 6 1 1 0 0 0 0 19 2 2199.1032 F5H3I6;F5H1C6;Q86UX7 F5H3I6 36 54 FERMT3 Fermitin family homolog 3 yes no 2 0.0086565 57.338 By MS/MS 1 3799300 0 3799300 4439 960 5065 11212 10939 10939 1807;1808;7132 1 PSSRLSHSSGYAQLNTYSR GPARFDGRPSSRLSHS AQLNTYSRGPASDYGP R P S S R G 1 2 1 0 0 1 0 1 1 0 2 0 0 0 1 6 1 0 2 0 0 0 19 1 2110.0192 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 451 469 KIRREL Kin of IRRE-like protein 1 yes no 2 0.031384 40.012 By MS/MS 1 0 0 0 4440 553 5066 11213 10940 10940 1 PSSRNSASATTPLSGNSSRR QYAENYTRPSSRNSAS LSGNSSRRGSGDTSSL R P S R R G 2 3 2 0 0 0 0 1 0 0 1 0 0 0 2 7 2 0 0 0 0 0 20 2 2032.0046 C9JSU1;Q9Y608 C9JSU1 75 94 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2 0.021145 49.12 By matching By MS/MS 1 1 20686000 11282000 9403700 4441 693 5067 11214;11215 10941 10941 1283;1284;1285;1286;1287 1 PSSSPVIFAGGQDR VTIPYRPKPSSSPVIF IFAGGQDRYSTGSDSA K P S D R Y 1 1 0 1 0 1 0 2 0 1 0 0 0 1 2 3 0 0 0 1 0 0 14 0 1416.6997 Q15366;H3BSS4 Q15366 186 199 PCBP2 Poly(rC)-binding protein 2 yes no 2 0.0023876 86.772 By MS/MS By MS/MS 1 1 220630000 101840000 118800000 4442 2134 5068 11216;11217 10942;10943 10942 4227;4228;4229 2 PSSTESDLRLR PLSQAGDRPSSTESDL TESDLRLRAGGAAPDY R P S L R A 0 2 0 1 0 0 1 0 0 0 2 0 0 0 1 3 1 0 0 0 0 0 11 1 1259.647 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 311 321 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2 0.02661 50.805 By MS/MS 1 0 0 0 4443 91 5069 11218 10944 10944 164;165;166 1 PSSTTPTPLVSETGGNSPSDKVDNELK FCPPPLPKPSSTTPTP DKVDNELKNLEHLSSF K P S L K N 0 0 2 2 0 0 2 2 0 0 2 2 0 0 4 5 4 0 0 2 0 0 27 1 2756.3352 Q2KHR3;H0YCQ7 Q2KHR3 1195 1221 QSER1 Glutamine and serine-rich protein 1 yes no 3 2.8612E-07 90.912 By MS/MS By MS/MS 1 1 32051000 15379000 16672000 4444 2176 5070 11219;11220 10945;10946 10945 4325 2 PSTLDALNYALR FPSERRNKPSTLDALN DALNYALRCVHSVQAN K P S L R C 2 1 1 1 0 0 0 0 0 0 3 0 0 0 1 1 1 0 1 0 0 0 12 0 1332.7038 Q8TAR6;A0A087WV69;P56645 Q8TAR6 74 85 PER3 Period circadian protein homolog 3 yes no 2 0.016462 72.325 By matching By MS/MS 1 1 41488000 19867000 21621000 4445 71 5071 11221;11222 10947 10947 130 0 PSTPTINVLESK RLPNNSSRPSTPTINV TINVLESKDTDSDREA R P S S K D 0 0 1 0 0 0 1 0 0 1 1 1 0 0 2 2 2 0 0 1 0 0 12 0 1284.6925 Q15910 Q15910 365 376 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 2 0.031898 70.628 By MS/MS By matching 1 1 11268000 5738900 5529500 4446 2159 5072 11223;11224 10948 10948 1 PSTQPRPDSWGEDNWEGLETDSR PFATLSARPSTQPRPD EGLETDSRQVKAELAR R P S S R Q 0 2 1 3 0 1 3 2 0 0 1 0 0 0 3 3 2 2 0 0 0 0 23 1 2658.1583 H0YDH0;E9PPN3;E9PS17;Q96KG9 H0YDH0 218 240 SCYL1 N-terminal kinase-like protein yes no 3 2.1199E-05 114.76 By MS/MS 1 21329000 0 21329000 4447 924 5073 11225 10949 10949 1723 1 PSVMVNDPLEESEPPEYIPRPRQPPR P S P R 0 3 1 1 0 1 4 0 0 1 1 0 1 0 8 2 0 0 1 2 0 0 26 2 3028.5077 REV__A6NJJ0 yes yes 3 0.0027614 65.438 By MS/MS By MS/MS 2 2 125020000 58934000 66088000 + 4448 3169 5074 11226;11227;11228;11229 10950;10951 10951 6762;6763 2 PTLLANGGHGVEGSDTTGSPTEFLEEK PLDTPSSKPTLLANGG PTEFLEEKMAYQEYPN K P T E K M 1 0 1 1 0 0 4 5 1 0 3 1 0 1 2 2 4 0 0 1 0 0 27 0 2742.2984 E7EVA0;P27816;H7C456;A0A0J9YW37 E7EVA0 98 124 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0065706 50.869 By matching By MS/MS 1 1 16072000 9302700 6768900 4449 828 5075 11230;11231 10952 10952 7096 1 PTMESVRNFEQWQSQR TRTTTWQRPTMESVRN FEQWQSQRNQLQGAMQ R P T Q R N 0 2 1 0 0 3 2 0 0 0 0 0 1 1 1 2 1 1 0 1 0 0 16 1 2021.9378 Q9H0M0 Q9H0M0 412 427 WWP1 NEDD4-like E3 ubiquitin-protein ligase WWP1 yes yes 2 0.028114 53.768 By MS/MS 1 0 0 0 4450 2806 5076 11232 10953 10953 5869;5870 1 PTPGLSQGPGKETLESALIALDSEK ________________ LIALDSEKPKKLRFHP R P T E K P 2 0 0 1 0 1 3 3 0 1 4 2 0 0 3 3 2 0 0 0 0 0 25 1 2537.3225 A0A1B0GWF6;A0A0C4DGF8;A0A1B0GU48;A0A1B0GV09;Q9H9B1 A0A1B0GWF6 5 29 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 3 0.020373 43.768 By MS/MS 1 5387600 5387600 0 4451 316 5077 11233 10954 10954 549 1 PTSSPAKGPPQK LGNILQAKPTSSPAKG PAKGPPQKAGPVAVQV K P T Q K A 1 0 0 0 0 1 0 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 12 1 1193.6404 J3KQ96;E7ETY2;Q13428 J3KQ96 580 591 TCOF1 Treacle protein no no 2;3 1.0572E-18 164.92 By MS/MS By MS/MS 2 2 157470000 30742000 126730000 4452 822;2059 5078 11234;11235;11236;11237 10955;10956;10957;10958;10959 10956 1506;1507;7089 5 PVDGSSSTLSMSTHFKMLKK KLLELCNKPVDGSSST THFKMLKKLVEEATFS K P V K K L 0 0 0 1 0 0 0 1 1 0 2 3 2 1 1 5 2 0 0 1 0 0 20 2 2180.097 Q13535;H0Y9K2 Q13535 2229 2248 ATR Serine/threonine-protein kinase ATR yes no 3 0.025177 44.258 By matching By MS/MS 1 1 10380000 5363200 5016800 4453 2062 5079 11238;11239 10960 10960 821 4068 0 PVIVEPLEQLDDEDGLPEK FLLTTTPRPVIVEPLE DEDGLPEKLAQKNPMY R P V E K L 0 0 0 3 0 1 4 1 0 1 3 1 0 0 3 0 0 0 0 2 0 0 19 0 2134.0681 P23246 P23246 444 462 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2;3 0.0004529 122.29 By MS/MS By MS/MS 2 2 62602000 38032000 24570000 4454 1753 5080 11240;11241;11242;11243 10961;10962;10963;10964 10964 4 PVKDEPQDGENPNPPNWSR PGHQGPQRPVKDEPQD PNPPNWSRTVVRDVRL R P V S R T 0 1 3 2 0 1 2 1 0 0 0 1 0 0 5 1 0 1 0 1 0 0 19 1 2174.9981 Q8NC60 Q8NC60 289 307 NOA1 Nitric oxide-associated protein 1 yes yes 2 0.022431 44.998 By MS/MS By matching 1 1 26336000 11965000 14372000 4455 2501 5081 11244;11245 10965 10965 5105 1 PVNLGLWDTAGQEDYDR ________________ AGQEDYDRLRPLSYPQ K P V D R L 1 1 1 3 0 1 1 2 0 0 2 0 0 0 1 0 1 1 1 1 0 0 17 0 1947.8963 J3KSC4;J3QLK0;B1AH77;B1AH78;B1AH80;P63000;P60763;P15153 J3KSC4 6 22 RAC3;RAC2;RAC1 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 3;Ras-related C3 botulinum toxin substrate 2 yes no 2 3.2504E-10 141.58 By MS/MS By MS/MS 1 1 12283000 5544300 6738400 4456 517 5082 11246;11247 10966;10967 10967 8063 2 PVPDSPVSVTRL TFALQHPRPVPDSPVS SPVSVTRL________ R P V R L - 0 1 0 1 0 0 0 0 0 0 1 0 0 0 3 2 1 0 0 3 0 0 12 1 1265.698 G3XAC1;A0A0C4DFT5;Q9BXS9 G3XAC1 640 651 SLC26A6 Solute carrier family 26 member 6 yes no 2 0.00023029 119.25 By MS/MS By MS/MS 2 2 49690000 26829000 22861000 4457 297 5083;5084 11248;11249;11250;11251 10968;10969;10970 10969 525 3 PVPMMIPDELAPTYSLDTR ________________ PTYSLDTRSELPSCRL R P V T R S 1 1 0 2 0 0 1 0 0 1 2 0 2 0 4 1 2 0 1 1 0 0 19 0 2145.0486 K7ERR2;K7EIM1;K7EQR0;K7ERY9;K7EKU5;A0A0C4DGQ7;C9JRL6;K7EIK7;O95834 K7ERR2 7 25 EML2 Echinoderm microtubule-associated protein-like 2 yes no 2 0.027331 40.493 By MS/MS 1 5222700 0 5222700 4458 324 5085 11252 10971 10971 127;128 1 PVSMVPNIPGIPGPPVNSSGSISPSGHPIPSEAK PSVISLARPVSMVPNI HPIPSEAKMRLKATLT R P V A K M 1 0 2 0 0 0 1 4 1 4 0 1 1 0 9 7 0 0 0 3 0 0 34 0 3302.6969 K7ELQ4;P17544 K7ELQ4 224 257 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes no 4 0.00079701 54.017 By MS/MS By MS/MS 1 1 23251000 11716000 11535000 4459 1383 5086 11253;11254 10972;10973 10972 484 2549;2550 2 PVSSTVSGTTQSWSSLVKNNCPDK PDTVASPKPVSSTVSG VKNNCPDKTSAAAGSS K P V D K T 0 0 2 1 1 1 0 1 0 0 1 2 0 0 2 6 3 1 0 3 0 0 24 1 2578.2333 A0A087X2H1;Q9ULT8 A0A087X2H1 1352 1375 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes no 3 0.0073763 49.528 By MS/MS 1 11058000 0 11058000 4460 176 5087 11255 10974 10974 287;288 1 PVSVAGSPLSPGPVR GAAAAGARPVSVAGSP PLSPGPVRAPLSRSHT R P V V R A 1 1 0 0 0 0 0 2 0 0 1 0 0 0 4 3 0 0 0 3 0 0 15 0 1418.7882 Q9Y4H2 Q9Y4H2 382 396 IRS2 Insulin receptor substrate 2 yes yes 2 0.019064 79.346 By MS/MS 1 0 0 0 4461 3120 5088 11256 10975 10975 6684;6685 1 PVTVEPMDQLDDEEGLPEK FLLTTFPRPVTVEPMD DEEGLPEKLVIKNQQF R P V E K L 0 0 0 3 0 1 4 1 0 0 2 1 1 0 3 0 1 0 0 2 0 0 19 0 2139.9882 Q15233;H7C367 Q15233 221 239 NONO Non-POU domain-containing octamer-binding protein yes no 2 0.0010808 108.23 By MS/MS 1 9887000 9887000 0 4462 2131 5089 11257 10976 10976 850 1 PVVYDRTRVPVPTTADSSDENEK P V E K 1 2 1 3 0 0 2 0 0 0 0 1 0 0 3 2 3 0 1 4 0 0 23 2 2574.2562 REV__Q6P4R8 yes yes 3 0.0076543 51.688 By MS/MS By MS/MS 1 1 103240000 55236000 48002000 + 4463 3213 5090 11258;11259 10977;10978 10978 7965;7966;8518 2 PWITRQNFSR SEQLVALKPWITRQNF ITRQNFSRCLELQCQP K P W S R C 0 2 1 0 0 1 0 0 0 1 0 0 0 1 1 1 1 1 0 0 0 0 10 1 1303.6786 M0R3A6;M0QXI0;M0QYM9;P49771 M0R3A6 27 36 FLT3LG Fms-related tyrosine kinase 3 ligand yes no 2 0.01403 63.091 By MS/MS 1 0 0 0 4464 1400 5091 11260 10979 10979 2575;7270 1 PWSQGTFSDQQWETLQHIFRVYR SDTVRSLKPWSQGTFS QHIFRVYRSSFTRDVK K P W Y R S 0 2 0 1 0 4 1 1 1 1 1 0 0 2 1 2 2 2 1 1 0 0 23 1 2908.4045 P15813 P15813 70 92 CD1D Antigen-presenting glycoprotein CD1d yes yes 3 0.024796 49.528 By MS/MS 1 6755200 6755200 0 4465 1706 5092 11261 10980 10980 3206;3207 0 PYECRYCLR ATVHTRERPYECRYCL YECRYCLRSYTQSGDL R P Y L R S 0 2 0 0 2 0 1 0 0 0 1 0 0 0 1 0 0 0 2 0 0 0 9 1 1315.5802 Q9H5J0 Q9H5J0 499 507 ZBTB3 Zinc finger and BTB domain-containing protein 3 yes yes 2 0.022818 52.403 By matching By MS/MS 1 1 9494300 4630500 4863800 4466 2839 5093 11262;11263 10981 10981 1 PYVCIQCGKAFCRTTNLIR QWIHTGEKPYVCIQCG CRTTNLIRHFSIHTGE K P Y I R H 1 2 1 0 3 1 0 1 0 2 1 1 0 1 1 0 2 0 1 1 0 0 19 2 2356.1602 Q14592 Q14592 447 465 ZNF460 Zinc finger protein 460 yes yes 3 0.020638 48.131 By matching By MS/MS 1 1 81530000 40693000 40836000 4467 2094 5094 11264;11265 10982 10982 8341 1 QAAQEEQEESLRARDDR Q A D R 3 3 0 2 0 3 4 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 17 2 2029.9413 REV__Q9UPV7 yes yes 2 0.027667 66.023 By matching By MS/MS 1 1 55959000 30350000 25609000 + 4468 3226 5095 11266;11267 10983 10983 6822 1 QADSEMTGYVVTR ILDFGLARQADSEMTG MTGYVVTRWYRAPEVI R Q A T R W 1 1 0 1 0 1 1 1 0 0 0 0 1 0 0 1 2 0 1 2 0 0 13 0 1455.6664 B5MDL5;P53778 B5MDL5 87 99 MAPK12 Mitogen-activated protein kinase 12 yes no 2 0.0069787 66.538 By MS/MS 1 10759000 0 10759000 4469 581 5096 11268 10984 10984 234 8079 1 QAGFPKDYLQVKQSYK ASKRHVGRQAGFPKDY LQVKQSYKVRLVLYGE R Q A Y K V 1 0 0 1 0 3 0 1 0 0 1 3 0 1 1 1 0 0 2 1 0 0 16 2 1898.989 H0Y9B2;Q8IY21 H0Y9B2 49 64 DDX60 Probable ATP-dependent RNA helicase DDX60 yes no 2 0.028988 54.005 By MS/MS 1 0 0 0 4470 1152 5097 11269 10985 10985 1 QALDSEEEEEDVAAK GRPQALSRQALDSEEE EEEDVAAKETLLRLSS R Q A A K E 3 0 0 2 0 1 5 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 15 0 1661.7268 Q8NC44;H7C3D5 Q8NC44 381 395 FAM134A Protein FAM134A yes no 2 6.127E-43 185.14 By MS/MS By MS/MS 2 2 239080000 111440000 127640000 4471 2497 5098 11270;11271;11272;11273 10986;10987;10988 10988 5095 3 QALMPVTPQASVCTSPGQGK QSWEKAIRQALMPVTP CTSPGQGKDHKDLSTS R Q A G K D 2 0 0 0 1 3 0 2 0 0 1 1 1 0 3 2 2 0 0 2 0 0 20 0 2056.0081 O94806;H7C172 O94806 529 548 PRKD3 Serine/threonine-protein kinase D3 yes no 2 0.0025427 81.639 By MS/MS 1 0 0 0 4472 1569 5099 11274 10989 10989 565 7350 1 QALSDLMIKPVQR SMRENKEKQALSDLMI LMIKPVQRIPRYELLV K Q A Q R I 1 1 0 1 0 2 0 0 0 1 2 1 1 0 1 1 0 0 0 1 0 0 13 1 1497.8337 Q96PE2 Q96PE2 1200 1212 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes yes 2 0.00016034 98.04 By MS/MS By MS/MS 4 4 57852000 37334000 20518000 4473 2694 5100 11275;11276;11277;11278;11279;11280;11281;11282 10990;10991;10992;10993;10994;10995;10996;10997 10990 164;165 1069 8 QAPAPTVIRDPPSITPAVKSPLPGPSEEK GTTPPQARQAPAPTVI LPGPSEEKTLQPSSQN R Q A E K T 3 1 0 1 0 1 2 1 0 2 1 2 0 0 8 3 2 0 0 2 0 0 29 2 2978.6077 Q13112 Q13112 439 467 CHAF1B Chromatin assembly factor 1 subunit B yes yes 3;4 2.2715E-06 81.974 By MS/MS By MS/MS 2 2 85971000 45468000 40502000 4474 2041 5101 11283;11284;11285;11286 10998;10999;11000;11001 10999 4006;4007 4 QAPFRSPTAPSVFSPTGNR TPLKGIPKQAPFRSPT VFSPTGNRTPIPPSRT K Q A N R T 2 2 1 0 0 1 0 1 0 0 0 0 0 2 4 3 2 0 0 1 0 0 19 1 2016.0177 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 224 242 NELFA Negative elongation factor A yes no 3 0.030287 45.916 By MS/MS By matching 1 1 7579500 4047800 3531700 4475 300 5102 11287;11288 11002 11002 529 1 QAQAQESEEEEESR LDLEARERQAQAQESE SEEEEESRSTRTLEQE R Q A S R S 2 1 0 0 0 3 6 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 14 0 1648.6813 H0YLQ7;Q9NVM6 H0YLQ7 106 119 DNAJC17 DnaJ homolog subfamily C member 17 yes no 2 0.0027313 85.837 By MS/MS By matching 1 1 5217700 4122900 1094700 4476 1212 5103 11289;11290 11003 11003 2254 1 QAQIEVVPSASALIIK VKLTIQNRQAQIEVVP SASALIIKALKEPPRD R Q A I K A 3 0 0 0 0 2 1 0 0 3 1 1 0 0 1 2 0 0 0 2 0 0 16 0 1665.9665 P30050 P30050 68 83 RPL12 60S ribosomal protein L12 yes yes 2 1.7198E-06 129.34 By MS/MS By MS/MS 1 1 14134000 8489700 5644300 4477 1778 5104 11291;11292 11004;11005 11004 2 QAQTQTSPEHLVLQQK QVQPKLQKQAQTQTSP EHLVLQQKQVQPQLQQ K Q A Q K Q 1 0 0 0 0 5 1 0 1 0 2 1 0 0 1 1 2 0 0 1 0 0 16 0 1834.9537 H0Y5D5;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3 H0Y5D5 266 281 CIZ1 Cip1-interacting zinc finger protein yes no 2 0.00043595 97.223 By MS/MS By MS/MS 1 1 17747000 9843500 7903100 4478 967 5105 11293;11294 11006;11007 11006 1821 2 QASASYDSEEEEEGLPMSYDEKR RQLKKGGKQASASYDS PMSYDEKRQLSLDINR K Q A K R Q 2 1 0 2 0 1 6 1 0 0 1 1 1 0 1 4 0 0 2 0 0 0 23 1 2649.1024 Q15059 Q15059 556 578 BRD3 Bromodomain-containing protein 3 yes yes 3 0.0025704 60.032 By MS/MS By MS/MS 2 1 58168000 51764000 6403400 4479 2126 5106;5107 11295;11296;11297 11008;11009;11010 11009 847 4202;4203;8345 3 QASEDSNDLTPTLPETPVPLPR QSRDAIQKQASEDSND ETPVPLPRKINTGKNK K Q A P R K 1 1 1 2 0 1 2 0 0 0 3 0 0 0 5 2 3 0 0 1 0 0 22 0 2376.1809 H0YBF7;A0A0A0MRE5;Q9ULH1;H0YBM4 H0YBF7 860 881 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 2 0.017875 56.648 By MS/MS 1 6439600 6439600 0 4480 1162 5108 11298 11011;11012 11012 2206 2 QASEGPLK DDIKKVVKQASEGPLK QASEGPLKGILGYTEH K Q A L K G 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 8 0 828.43413 P04406;E7EUT5 P04406 264 271 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.016692 107.01 By MS/MS By MS/MS 1 1 6300500 2714700 3585800 4481 1635 5109 11299;11300 11013;11014 11014 2 QASEQNWANYSAEQNR SSCRNYNKQASEQNWA NYSAEQNRMGQAGSTI K Q A N R M 3 1 3 0 0 3 2 0 0 0 0 0 0 0 0 2 0 1 1 0 0 0 16 0 1894.8194 P17302 P17302 304 319 GJA1 Gap junction alpha-1 protein yes yes 2 5.1179E-09 135.1 By MS/MS By matching 1 1 43007000 17572000 25435000 4482 1716 5110 11301;11302 11015 11015 8233 1 QASGTPQPALR EADLESLRQASGTPQP GTPQPALRERKSSISS R Q A L R E 2 1 0 0 0 2 0 1 0 0 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1124.5938 E9PDY7;G5E9V3;E9PFQ4;Q86SQ0 E9PDY7 400 410 PHLDB2 Pleckstrin homology-like domain family B member 2 yes no 2 0.031802 59.367 By matching By MS/MS 1 1 8532000 3743200 4788800 4483 854 5111 11303;11304 11016 11016 1 QASLDGLQQLR GGGGRLLRQASLDGLQ LDGLQQLRDNMGSRRD R Q A L R D 1 1 0 1 0 3 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 11 0 1227.6571 Q3MII6 Q3MII6 504 514 TBC1D25 TBC1 domain family member 25 yes yes 2 9.1163E-06 138.42 By MS/MS By MS/MS 1 1 51490000 29703000 21787000 4484 2188 5112 11305;11306 11017;11018 11018 4362 2 QASLPVSGSVAGDFVK RARPPVQKQASLPVSG SVAGDFVKKATAFLQR K Q A V K K 2 0 0 1 0 1 0 2 0 0 1 1 0 1 1 3 0 0 0 3 0 0 16 0 1560.8148 F8W9F9;H0Y7T5;Q9Y3S1;H0Y7R3;E9PCD1;H0Y7J9;H0Y493 F8W9F9 1823 1838 WNK2 Serine/threonine-protein kinase WNK2 yes no 2 9.4029E-11 142.4 By MS/MS By MS/MS 1 1 30523000 17461000 13062000 4485 1040 5113 11307;11308 11019;11020 11020 1964 2 QASPETSASPDGSQNLVYETELLR PLKVQYQRQASPETSA VYETELLRTQLNDSLK R Q A L R T 2 1 1 1 0 2 3 1 0 0 3 0 0 0 2 4 2 0 1 1 0 0 24 0 2591.2351 Q14789 Q14789 3008 3031 GOLGB1 Golgin subfamily B member 1 yes yes 2 6.1163E-05 83.871 By MS/MS By MS/MS 1 1 35737000 21061000 14676000 4486 2108 5114 11309;11310 11021;11022 11021 4171 2 QASPTEVVER FNRTPGSRQASPTEVV SPTEVVERLGPNTNPS R Q A E R L 1 1 0 0 0 1 2 0 0 0 0 0 0 0 1 1 1 0 0 2 0 0 10 0 1114.5619 C9JW01;A0A0C4DG68;A0A0A0MR59;Q8TB72 C9JW01 180 189 PUM2 Pumilio homolog 2 yes no 2 4.7828E-10 114.89 By MS/MS By MS/MS 1 1 57151000 25781000 31370000 4487 199 5115 11311;11312 11023;11024 11023 353 0 QASSDSDSILSLK AAAACLSRQASSDSDS SDSILSLKSGISLGSP R Q A L K S 1 0 0 2 0 1 0 0 0 1 2 1 0 0 0 5 0 0 0 0 0 0 13 0 1349.6674 P25054 P25054 2127 2139 APC Adenomatous polyposis coli protein yes yes 2 0.0033602 84.687 By matching By MS/MS 1 1 10063000 4875400 5187900 4488 1760 5116 11313;11314 11025 11025 3325 1 QASTDAGTAGALTPQHVR PEPKSHSRQASTDAGT ALTPQHVRAHSSPASL R Q A V R A 4 1 0 1 0 2 0 2 1 0 1 0 0 0 1 1 3 0 0 1 0 0 18 0 1779.8864 P46937 P46937 107 124 YAP1 Transcriptional coactivator YAP1 yes yes 2 0.0015033 88.637 By MS/MS By matching 1 1 25997000 13733000 12263000 4489 1841 5117 11315;11316 11026 11026 3528 1 QASTVEYLPGMLHSNCPK KRPNFVDRQASTVEYL MLHSNCPKGLLPKFSS R Q A P K G 1 0 1 0 1 1 1 1 1 0 2 1 1 0 2 2 1 0 1 1 0 0 18 0 2030.9554 Q8ND04 Q8ND04 740 757 SMG8 Protein SMG8 yes yes 3 0.00076834 77.051 By MS/MS By MS/MS 1 1 22578000 10535000 12043000 4490 2504 5118 11317;11318 11027;11028 11027 5113;7732 2 QAVGGAGPPNPAINGSAPR VQNLDKARQAVGGAGP AINGSAPRDLFDMKPF R Q A P R D 4 1 2 0 0 1 0 4 0 1 0 0 0 0 4 1 0 0 0 1 0 0 19 0 1729.886 P29353;H0Y539;X6R6D0 P29353 438 456 SHC1 SHC-transforming protein 1 yes no 2;3 0.00042832 108.45 By MS/MS By MS/MS 2 1 12859000 5176200 7683200 4491 1774 5119 11319;11320;11321 11029;11030;11031 11031 78 3341 3 QAYEPPPPPAYR HASRRPDRQAYEPPPP PPPPPAYRTGSLKPNP R Q A Y R T 2 1 0 0 0 1 1 0 0 0 0 0 0 0 5 0 0 0 2 0 0 0 12 0 1384.6776 Q15654;A0A0D9SFS2 Q15654 121 132 TRIP6 Thyroid receptor-interacting protein 6 yes no 2 0.00057766 114.86 By MS/MS By matching 1 1 20830000 11131000 9698600 4492 2149 5120 11322;11323 11032 11032 8355 1 QCEGITSPEGSK VSMVGQVKQCEGITSP ITSPEGSKSIVEGIIE K Q C S K S 0 0 0 0 1 1 2 2 0 1 0 1 0 0 1 2 1 0 0 0 0 0 12 0 1291.5714 Q9Y570 Q9Y570 237 248 PPME1 Protein phosphatase methylesterase 1 yes yes 2 0.0014345 92.939 By MS/MS 1 11315000 11315000 0 4493 3124 5121 11324 11033 11033 6694 0 QCSLNCISSGCHTSGDSLELR SASTTLGRQCSLNCIS SGDSLELRKNHKNGPN R Q C L R K 0 1 1 1 3 1 1 2 1 1 3 0 0 0 0 5 1 0 0 0 0 0 21 0 2380.0206 Q5VWN6 Q5VWN6 1218 1238 FAM208B Protein FAM208B yes yes 3 0.027206 57.152 By MS/MS 1 0 0 0 4494 2275 5122 11325 11034 11034 4566 1 QDCCGNCSDSEEELPTRL LLQRLFSRQDCCGNCS EEELPTRL________ R Q D R L - 0 1 1 2 3 1 3 1 0 0 2 0 0 0 1 2 1 0 0 0 0 0 18 1 2168.8409 F8W9W2;P43250 F8W9W2 525 542 GRK6 G protein-coupled receptor kinase 6 yes no 2 0.0055303 73.881 By MS/MS 1 0 0 0 4495 1041 5123 11326 11035 11035 1967;1968 1 QDDGSSSASPSVQGAPR APVGQGARQDDGSSSA PSVQGAPREVVDPSGG R Q D P R E 2 1 0 2 0 2 0 2 0 0 0 0 0 0 2 5 0 0 0 1 0 0 17 0 1644.734 Q9NQA3 Q9NQA3 319 335 WASH6P WAS protein family homolog 6 yes yes 2 0.016656 63.374 By matching By MS/MS 1 1 11633000 6728800 4903700 4496 2892 5124 11327;11328 11036 11036 6088 1 QDDSPPRPIIGPALPPGFIK ALPPGFKKQDDSPPRP ALPPGFIKSTQKSDKG K Q D I K S 1 1 0 2 0 1 0 2 0 3 1 1 0 1 6 1 0 0 0 0 0 0 20 1 2114.1524 A0A0A0MRI1;Q8IXQ4 A0A0A0MRI1 100 119 GPALPP1 GPALPP motifs-containing protein 1 yes no 2;3 0.0002113 89.877 By MS/MS By MS/MS 2 2 105900000 55733000 50164000 4497 216 5125 11329;11330;11331;11332 11037;11038;11039;11040 11040 377 4 QDDSPSGASYGQDYDLSPSR RKWSDSSKQDDSPSGA DYDLSPSRSHTSSNYD K Q D S R S 1 1 0 4 0 2 0 2 0 0 1 0 0 0 2 5 0 0 2 0 0 0 20 0 2143.893 J3QSD7;Q9NYV4 J3QSD7 233 252 CDK12 Cyclin-dependent kinase 12 yes no 2 2.0497E-16 150.65 By MS/MS By MS/MS 1 1 16587000 8688000 7899000 4498 1361 5126 11333;11334 11041;11042 11042 2522 2 QDENDDDDDWNPCK ILTQTLTKQDENDDDD DDDWNPCKAAGVCLML K Q D C K A 0 0 2 6 1 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 14 0 1764.6169 Q14974 Q14974 333 346 KPNB1 Importin subunit beta-1 yes yes 2 6.76E-16 175.74 By MS/MS By MS/MS 1 1 18754000 8789300 9964400 4499 2111 5127 11335;11336 11043;11044 11044 2 QDGESYKNPGKPDGVNYIR RGYFINNKQDGESYKN PDGVNYIRTDEEGDFR K Q D I R T 0 1 2 2 0 1 1 3 0 1 0 2 0 0 2 1 0 0 2 1 0 0 19 2 2136.0236 Q9BX67 Q9BX67 277 295 JAM3 Junctional adhesion molecule C yes yes 3 0.00021887 90.706 By MS/MS 1 9342400 9342400 0 4500 2769 5128 11337 11045 11045 8452 1 QDGPMPKPHSVSLNDTETRK AVPLNASKQDGPMPKP LNDTETRKLMEECKRL K Q D R K L 0 1 1 2 0 1 1 1 1 0 1 2 1 0 3 2 2 0 0 1 0 0 20 2 2236.0906 Q9P0L0 Q9P0L0 155 174 VAPA Vesicle-associated membrane protein-associated protein A yes yes 3 0.00067346 78.122 By MS/MS By matching 1 1 54492000 15816000 38676000 4501 2965 5129 11338;11339 11046 11046 138;169 1178 6244;7892 1 QDKNSQQPCSR QLGQSQHKQDKNSQQP NSQQPCSRCSDGVIKL K Q D S R C 0 1 1 1 1 3 0 0 0 0 0 1 0 0 1 2 0 0 0 0 0 0 11 1 1346.5997 Q92562 Q92562 831 841 FIG4 Polyphosphoinositide phosphatase yes yes 2 0.0048463 87.641 By MS/MS 1 0 0 0 4502 2584 5130 11340 11047 11047 120 5305 1 QDKPLSPAGSSQEAADTPDTR PRGQEGSRQDKPLSPA AADTPDTRHPCSLGSS R Q D T R H 3 1 0 3 0 2 1 1 0 0 1 1 0 0 3 3 2 0 0 0 0 0 21 1 2170.0138 P13994 P13994 357 377 CCDC130 Coiled-coil domain-containing protein 130 yes yes 3 0.0011578 69.259 By MS/MS By MS/MS 1 1 19512000 11833000 7678700 4503 1698 5131 11341;11342 11048;11049 11049 3200 2 QDKPMDTSVLSEEGGEPFQK SPTEQEGRQDKPMDTS EGGEPFQKKLQSGEPV R Q D Q K K 0 0 0 2 0 2 3 2 0 0 1 2 1 1 2 2 1 0 0 1 0 0 20 1 2221.0209 Q12888;A6NNK5;C9JXV0 Q12888 388 407 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.029584 51.166 By MS/MS By MS/MS 1 1 13492000 7756800 5735400 4504 2031 5132 11343;11344 11050;11051 11050 806 2 QDLDDDEHDYEEILEQFQK HRPAKPQRQDLDDDEH EILEQFQKTI______ R Q D Q K T 0 0 0 5 0 3 4 0 1 1 2 1 0 1 0 0 0 0 1 0 0 0 19 0 2408.0292 H7C124;Q5TEJ8 H7C124 371 389 THEMIS2 Protein THEMIS2 yes no 3 0.00047205 81.606 By MS/MS By MS/MS 1 1 14672000 7658800 7013600 4505 1272 5133 11345;11346 11052;11053 11053 8161 2 QDLIRELELMNSTSEDVAASHR EEEAEQYKQDLIRELE EDVAASHRCDAGSPSK K Q D H R C 2 2 1 2 0 1 3 0 1 1 3 0 1 0 0 3 1 0 0 1 0 0 22 1 2513.218 O75132 O75132 1027 1048 ZBED4 Zinc finger BED domain-containing protein 4 yes yes 3 0.031736 45.369 By MS/MS 1 4496100 0 4496100 4506 1535 5134 11347 11054 11054 0 QDLPNAMNAAEITDK ________________ NAAEITDKLGLHSLRH K Q D D K L 3 0 2 2 0 1 1 0 0 1 1 1 1 0 1 0 1 0 0 0 0 0 15 0 1629.7668 H0YGG7;P84077;P61204 H0YGG7 3 17 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 2 0.0017687 107.99 By MS/MS By matching 1 1 12152000 6082100 6069700 4507 1183 5135 11348;11349 11055 11055 1 QDPGMGLRLIYYSASEGTTDK HNSMYWYRQDPGMGLR ASEGTTDKGEVPNGYN R Q D D K G 1 1 0 2 0 1 1 3 0 1 2 1 1 0 1 2 2 0 2 0 0 0 21 1 2301.0947 A0A0K0K1D8 A0A0K0K1D8 56 76 yes yes 3 0.031003 48.376 By MS/MS 1 5600800 5600800 0 4508 374 5136 11350 11056 11056 149 0 QDSLDIYNER SRRQLLTKQDSLDIYN SLDIYNERDLFKTEEP K Q D E R D 0 1 1 2 0 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 0 10 0 1251.5731 Q9ULQ0 Q9ULQ0 352 361 STRIP2 Striatin-interacting protein 2 yes yes 2 0.018988 65.719 By MS/MS By MS/MS 1 1 8860800 3565900 5294900 4509 3047 5137 11351;11352 11057;11058 11057 6433 2 QDSLEPVLRDPCYLINEGICNR DKLNSIMRQDSLEPVL INEGICNRNIDQTMLS R Q D N R N 0 2 2 2 2 1 2 1 0 2 3 0 0 0 2 1 0 0 1 1 0 0 22 1 2660.2687 D6RD37;D6RAX8;D6RBL1;D6RDZ9;D6RCK9;E7EWD5 D6RD37 71 92 TSC22D3 yes no 3 1.2063E-05 97.623 By matching By MS/MS 1 1 20771000 9455000 11316000 4510 746 5138 11353;11354 11059 11059 1349 1 QDSLSSEVDTLK CSHSSQQRQDSLSSEV SSEVDTLKQSCWDLER R Q D L K Q 0 0 0 2 0 1 1 0 0 0 2 1 0 0 0 3 1 0 0 1 0 0 12 0 1320.6409 Q08378 Q08378 463 474 GOLGA3 Golgin subfamily A member 3 yes yes 2 0.0039458 91.307 By MS/MS By matching 1 1 20023000 8888700 11135000 4511 2013 5139 11355;11356 11060 11060 3882 0 QDSWEVVEGLR CSSKQGSRQDSWEVVE WEVVEGLRGEMNYTQE R Q D L R G 0 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 1 0 2 0 0 11 0 1316.6361 Q9H4L5;C9J8P4;C9JEF2;C9JZ19 Q9H4L5 32 42 OSBPL3 Oxysterol-binding protein-related protein 3 yes no 2 0.0070341 77.894 By MS/MS By matching 1 1 8769000 4785200 3983800 4512 2833 5140 11357;11358 11061 11061 5943 1 QDTVNAAESKITNLIYLKHTLELVDPLK SVLVQIPKQDTVNAAE LELVDPLKIAMKNCNT K Q D L K I 2 0 2 2 0 1 2 0 1 2 5 3 0 0 1 1 3 0 1 2 0 0 28 2 3165.7285 O15457 O15457 408 435 MSH4 MutS protein homolog 4 yes yes 4 0.020718 40.142 By MS/MS 1 5794400 5794400 0 4513 1484 5141 11359 11062 11062 2774 1 QDTVSEPVTPASLAALQSDVQPVGHDYVEEVR AVQIPEVKQDTVSEPV HDYVEEVRNDEGKVIR K Q D V R N 3 1 0 3 0 3 3 1 1 0 2 0 0 0 3 3 2 0 1 6 0 0 32 0 3435.6794 Q96KR1 Q96KR1 542 573 ZFR Zinc finger RNA-binding protein yes yes 3 2.9528E-08 82.773 By MS/MS By MS/MS 1 1 54997000 25367000 29630000 4514 2679 5142 11360;11361 11063;11064 11063 7797 2 QDVDNASLAR ENTLQSFRQDVDNASL VDNASLARLDLERKVE R Q D A R L 2 1 1 2 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 10 0 1087.5258 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 208 217 VIM Vimentin yes no 2 0.015908 78.556 By MS/MS 1 13617000 0 13617000 4515 1663 5143 11362 11065 11065 1 QDVYGPQPQVR EGYRAPSRQDVYGPQP YGPQPQVRVGGSSVDL R Q D V R V 0 1 0 1 0 3 0 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 11 0 1285.6415 C9JZR2;O60716;E9PRE2 C9JZR2 254 264 CTNND1 Catenin delta-1 yes no 2;3 4.2459E-07 152.11 By MS/MS By MS/MS 2 2 410580000 200940000 209640000 4516 706 5144 11363;11364;11365;11366 11066;11067;11068 11066 8105 3 QEAGDSPPPAPGTPK GSALCGGKQEAGDSPP PPAPGTPKANGSQPNS K Q E P K A 2 0 0 1 0 1 1 2 0 0 0 1 0 0 5 1 1 0 0 0 0 0 15 0 1447.6943 J3KR72;P49848 J3KR72 705 719 TAF6 Transcription initiation factor TFIID subunit 6 yes no 2 0.0051155 78.848 By matching By MS/MS 1 1 14130000 7347500 6782400 4517 1331 5145 11367;11368 11069 11069 2467;7250 0 QEAGGLGISIK VRRVRVVKQEAGGLGI GGLGISIKGGRENRMP K Q E I K G 1 0 0 0 0 1 1 3 0 2 1 1 0 0 0 1 0 0 0 0 0 0 11 0 1071.5924 Q13425;A0A140TA73 Q13425 121 131 SNTB2 Beta-2-syntrophin yes no 2 0.014676 69.258 By MS/MS 1 2478500 0 2478500 4518 2058 5146 11369 11070 11070 4058 1 QEAIPDLEDSPPVSDSEEQQESAR ESKKTAPRQEAIPDLE EEQQESARAVPEKSTA R Q E A R A 2 1 0 3 0 3 5 0 0 1 1 0 0 0 3 4 0 0 0 1 0 0 24 0 2655.1784 Q9BTC0 Q9BTC0 796 819 DIDO1 Death-inducer obliterator 1 yes yes 3 6.5252E-05 109.56 By MS/MS By MS/MS 1 1 85579000 45575000 40004000 4519 2747 5147 11370;11371 11071;11072 11072 5707;5708 2 QEAKPQQAAGMLSPK AKDDPDGKQEAKPQQA AAGMLSPKTGGKEAAS K Q E P K T 3 0 0 0 0 3 1 1 0 0 1 2 1 0 2 1 0 0 0 0 0 0 15 1 1582.8137 J3KQ96;E7ETY2;Q13428 J3KQ96 1207 1221 TCOF1 Treacle protein no no 3 0.01082 62.966 By matching By MS/MS 1 1 27387000 14894000 12493000 4520 822;2059 5148 11372;11373 11073 11073 309 1498 1 QEDMPFTCEGITPDIIINPHAIPSR GTCGIQYRQEDMPFTC NPHAIPSRMTIGHLIE R Q E S R M 1 1 1 2 1 1 2 1 1 5 0 0 1 1 4 1 2 0 0 0 0 0 25 0 2850.368 C9J2Y9;P30876;C9J4M6 C9J2Y9 944 968 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 3 0.015517 58.516 By MS/MS 1 0 0 0 4521 630 5149 11374 11074 11074 246 1178;7011 1 QEEEAAQQGPVVVSPASDYK KLKELAQRQEEEAAQQ VSPASDYKDKYSHLIG R Q E Y K D 3 0 0 1 0 3 3 1 0 0 0 1 0 0 2 2 0 0 1 3 0 0 20 0 2131.0069 I3L0X5;I3L4C3;O75391 I3L0X5 94 113 SPAG7 Sperm-associated antigen 7 yes no 2 0.0019403 77.137 By MS/MS By MS/MS 1 1 10803000 5927300 4875800 4522 1302 5150 11375;11376 11075;11076 11076 2419 2 QEEEQDLDGEKGPSSEGPEEEDGEGFSFK EEQAVEARQEEEQDLD DGEGFSFKYSPGKLRG R Q E F K Y 0 0 0 3 0 2 9 5 0 0 1 2 0 2 2 3 0 0 0 0 0 0 29 1 3184.3116 P84157 P84157 114 142 MXRA7 Matrix-remodeling-associated protein 7 yes yes 3 0.010949 59.673 By MS/MS 1 0 0 0 4523 1967 5151 11377 11077 11077 3755;3756 1 QEEGADASEEDPTPAGEEDVK EEDLTRARQEEGADAS PAGEEDVKDAREEDGV R Q E V K D 3 0 0 3 0 1 6 2 0 0 0 1 0 0 2 1 1 0 0 1 0 0 21 0 2201.9084 E5RHA3;Q86X53;H0YB25 E5RHA3 153 173 ERICH1 Glutamate-rich protein 1 yes no 2 0.00077167 82.663 By MS/MS By MS/MS 1 1 12300000 6331700 5968500 4524 780 5152 11378;11379 11078;11079 11079 1396 2 QEEGADASEEDPTPAGEEDVKDAR EEDLTRARQEEGADAS EEDVKDAREEDGVDTI R Q E A R E 4 1 0 4 0 1 6 2 0 0 0 1 0 0 2 1 1 0 0 1 0 0 24 1 2544.0736 E5RHA3;Q86X53;H0YB25 E5RHA3 153 176 ERICH1 Glutamate-rich protein 1 yes no 3 0.0067531 51.503 By MS/MS By matching 1 1 8123600 4223700 3899900 4525 780 5153 11380;11381 11080 11080 1396 1 QEEIDESDDDLDDKPSPIKK VEYEWNLRQEEIDESD DKPSPIKKERSPRPQS R Q E K K E 0 0 0 6 0 1 3 0 0 2 1 3 0 0 2 2 0 0 0 0 0 0 20 2 2315.0652 H0YBF7;A0A0A0MRE5;Q9ULH1;H0YBM4 H0YBF7 532 551 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 3 0.0002417 93.427 By MS/MS By matching 1 1 28929000 12366000 16563000 4526 1162 5154 11382;11383 11081 11081 2207;2208 1 QEELNNQLFLYDTHQNLR SCRQLRRRQEELNNQL YDTHQNLRNANRDALV R Q E L R N 0 1 3 1 0 3 2 0 1 0 4 0 0 1 0 0 1 0 1 0 0 0 18 0 2274.1029 A0A0A0MRF9;P16885 A0A0A0MRF9 1207 1224 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 3 0.0014519 71.781 By MS/MS 1 4558600 4558600 0 4527 212 5155 11384 11082;11083 11082 8009 2 QEISRLQK KILEETHKQEISRLQK QEISRLQKRLQWYAEN K Q E Q K R 0 1 0 0 0 2 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 8 1 1000.5665 Q5TB80 Q5TB80 853 860 CEP162 Centrosomal protein of 162 kDa yes yes 2 0.02662 78.655 By MS/MS By matching 1 1 15518000 7748600 7769400 4528 2251 5156 11385;11386 11084 11084 4505 1 QEKPAEKPAETPVATSPTATDSTSGDSSR PAPASAAKQEKPAEKP STSGDSSRSNLFEDAT K Q E S R S 4 1 0 2 0 1 3 1 0 0 0 2 0 0 4 5 5 0 0 1 0 0 29 2 2944.3898 H0Y579;P54727 H0Y579 15 43 RAD23B UV excision repair protein RAD23 homolog B yes no 3;4 0.00014022 75.119 By MS/MS By MS/MS 2 2 563810000 333660000 230150000 4529 1128 5157 11387;11388;11389;11390 11085;11086;11087 11087 2144;7196 3 QELFASRFLHSSIFEQDSKR HKEEEQERQELFASRF IFEQDSKRLQHLERKE R Q E K R L 1 2 0 1 0 2 2 0 1 1 2 1 0 3 0 4 0 0 0 0 0 0 20 2 2424.2186 Q96T58 Q96T58 1523 1542 SPEN Msx2-interacting protein yes yes 3 0.022982 47.204 By matching By MS/MS 1 1 18346000 7441400 10905000 4530 2716 5158 11391;11392 11088 11088 5632;5633;5634 0 QELGSPEER RNFEDRERQELGSPEE ELGSPEERLQDSSDPD R Q E E R L 0 1 0 0 0 1 3 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 9 0 1043.4884 V9GYM8;Q92974;V9GYF0 V9GYM8 973 981 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.0040905 107.03 By MS/MS By MS/MS 1 1 40619000 19646000 20973000 4531 2613 5159 11393;11394 11089;11090;11091;11092;11093 11093 5374 5 QEMQTPRTRPR YHMLPHARQEMQTPRT QTPRTRPRLSAGVAEV R Q E P R L 0 3 0 0 0 2 1 0 0 0 0 0 1 0 2 0 2 0 0 0 0 0 11 2 1398.715 H0Y2P5;Q96CT2 H0Y2P5 407 417 KLHL29 Kelch-like protein 29 yes no 2 0.029419 54.722 By matching By MS/MS 1 1 6880700 2809300 4071400 4532 1111 5160 11395;11396 11094 11094 400 1 QENCGAQQVPAGPGTSTPPSSPVR TAAEGAPRQENCGAQQ TPPSSPVRTCGPLTDE R Q E V R T 2 1 1 0 1 3 1 3 0 0 0 0 0 0 5 3 2 0 0 2 0 0 24 0 2421.1343 Q96G46 Q96G46 257 280 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes yes 2;3 6.923E-27 157.53 By MS/MS By MS/MS 2 2 171070000 65421000 105650000 4533 2651 5161 11397;11398;11399;11400 11095;11096;11097;11098 11098 5469;5470;5471;7790 4 QEPIESDEEEAEPPR AQAGVQVKQEPIESDE EEEAEPPREVEPGQRQ K Q E P R E 1 1 0 1 0 1 6 0 0 1 0 0 0 0 3 1 0 0 0 0 0 0 15 0 1753.7643 P56524 P56524 560 574 HDAC4 Histone deacetylase 4 yes yes 2 0.016923 66.436 By MS/MS By matching 1 1 9829500 5850800 3978600 4534 1917 5162 11401;11402 11099 11099 3709 1 QEQINTEPLEDTVLSPTK EPEDKTVKQEQINTEP DTVLSPTKKRKRQKGT K Q E T K K 0 0 1 1 0 2 3 0 0 1 2 1 0 0 2 1 3 0 0 1 0 0 18 0 2041.0215 O15446 O15446 271 288 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 2;3 3.9373E-143 241.98 By MS/MS By MS/MS 2 2 368650000 182320000 186330000 4535 1483 5163 11403;11404;11405;11406 11100;11101;11102;11103 11102 2773;7309;7310 4 QEQINTEPLEDTVLSPTKK EPEDKTVKQEQINTEP TVLSPTKKRKRQKGTE K Q E K K R 0 0 1 1 0 2 3 0 0 1 2 2 0 0 2 1 3 0 0 1 0 0 19 1 2169.1165 O15446 O15446 271 289 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 3 0.00011391 111.11 By MS/MS By MS/MS 1 1 26377000 12931000 13446000 4536 1483 5164 11407;11408 11104;11105;11106 11106 2773;7309;7310 3 QEQSPPQPPNDHSQDSEWSK SGDLSSEKQEQSPPQP SQDSEWSKREQIPLQV K Q E S K R 0 0 1 2 0 4 2 0 1 0 0 1 0 0 4 4 0 1 0 0 0 0 20 0 2319.9992 Q9P2P6;H3BN21 Q9P2P6 4174 4193 STARD9 StAR-related lipid transfer protein 9 yes no 3 0.030184 41.188 By MS/MS 1 0 0 0 4537 2987 5165 11409 11107 11107 1 QERLSPEVAPPAHR LPAGVVVKQERLSPEV EVAPPAHRRPDHSGGS K Q E H R R 2 2 0 0 0 1 2 0 1 0 1 0 0 0 3 1 0 0 0 1 0 0 14 1 1585.8325 Q8TAD8 Q8TAD8 31 44 SNIP1 Smad nuclear-interacting protein 1 yes yes 3 0.00025699 96.489 By MS/MS By MS/MS 1 1 100980000 58773000 42210000 4538 2530 5166 11410;11411 11108;11109 11108 5167 2 QESCLGNSPPFEK KNDNKLTRQESCLGNS GNSPPFEKESEPESPM R Q E E K E 0 0 1 0 1 1 2 1 0 0 1 1 0 1 2 2 0 0 0 0 0 0 13 0 1491.6664 Q86W56 Q86W56 284 296 PARG Poly(ADP-ribose) glycohydrolase yes yes 2 0.00515 80.387 By MS/MS By matching 1 1 8399900 3762500 4637400 4539 2410 5167 11412;11413 11110 11110 4914 1 QESSGEEIIMGDPAQSPESK ENEEESPRQESSGEEI PAQSPESKDSTEMSLE R Q E S K D 1 0 0 1 0 2 4 2 0 2 0 1 1 0 2 4 0 0 0 0 0 0 20 0 2117.9423 Q9UEG4 Q9UEG4 37 56 ZNF629 Zinc finger protein 629 yes yes 2 0.028758 60.454 By MS/MS 1 0 0 0 4540 2996 5168 11414 11111 11111 1188 1 QETEVELYNEFPEPIK TIARNALKQETEVELY NEFPEPIKLDKNDRAK K Q E I K L 0 0 1 0 0 1 5 0 0 1 1 1 0 1 2 0 1 0 1 1 0 0 16 0 1963.9415 P51149;C9J8S3;C9J4S4;C9J4V0 P51149 176 191 RAB7A Ras-related protein Rab-7a yes no 2;3 1.6659E-141 242.4 By MS/MS By MS/MS 1 2 39852000 20585000 19267000 4541 1874 5169 11415;11416;11417 11112;11113;11114 11112 8293 3 QETEVELYNEFPEPIKLDK TIARNALKQETEVELY PEPIKLDKNDRAKASA K Q E D K N 0 0 1 1 0 1 5 0 0 1 2 2 0 1 2 0 1 0 1 1 0 0 19 1 2320.1475 P51149;C9J8S3;C9J4S4;C9J4V0 P51149 176 194 RAB7A Ras-related protein Rab-7a yes no 2;3 1.5204E-11 144.08 By MS/MS By MS/MS 2 1 30872000 20622000 10250000 4542 1874 5170 11418;11419;11420 11115;11116;11117;11118 11117 8293 4 QETEVELYNEFPEPIKLDKNDR TIARNALKQETEVELY IKLDKNDRAKASAESC K Q E D R A 0 1 2 2 0 1 5 0 0 1 2 2 0 1 2 0 1 0 1 1 0 0 22 2 2705.3184 P51149;C9J8S3;C9J4S4;C9J4V0 P51149 176 197 RAB7A Ras-related protein Rab-7a yes no 3 5.1222E-05 90.442 By MS/MS By MS/MS 1 1 46333000 26151000 20183000 4543 1874 5171 11421;11422 11119;11120 11119 8293 1 QEVAPVQYNIVEQNK WKPLGQQKQEVAPVQY YNIVEQNKLNKDYRAN K Q E N K L 1 0 2 0 0 3 2 0 0 1 0 1 0 0 1 0 0 0 1 3 0 0 15 0 1757.8948 A0A0A0MSX4;Q9Y6N7;A0A087WZ85;A0A087WTM1 A0A0A0MSX4 987 1001 ROBO1 Roundabout homolog 1 yes no 2;3 3.1185E-10 138.42 By MS/MS By MS/MS 2 2 124610000 62892000 61718000 4544 262 5172 11423;11424;11425;11426 11121;11122;11123 11121 8019 2 QEVAPVQYNIVEQNKLNK WKPLGQQKQEVAPVQY VEQNKLNKDYRANDTV K Q E N K D 1 0 3 0 0 3 2 0 0 1 1 2 0 0 1 0 0 0 1 3 0 0 18 1 2113.1168 A0A0A0MSX4;Q9Y6N7;A0A087WZ85;A0A087WTM1 A0A0A0MSX4 987 1004 ROBO1 Roundabout homolog 1 yes no 3 0.006809 67.685 By MS/MS 1 5970200 0 5970200 4545 262 5173 11427 11124;11125 11125 8019 2 QEVAPVQYNIVEQNKLNKDYR WKPLGQQKQEVAPVQY NKLNKDYRANDTVPPT K Q E Y R A 1 1 3 1 0 3 2 0 0 1 1 2 0 0 1 0 0 0 2 3 0 0 21 2 2547.3082 A0A0A0MSX4;Q9Y6N7;A0A087WZ85;A0A087WTM1 A0A0A0MSX4 987 1007 ROBO1 Roundabout homolog 1 yes no 3 0.020019 55.031 By MS/MS 1 7528200 0 7528200 4546 262 5174 11428 11126 11126 8019;8020 1 QEYDESGPSIVHR FQQMWISKQEYDESGP SGPSIVHRKCF_____ K Q E H R K 0 1 0 1 0 1 2 1 1 1 0 0 0 0 1 2 0 0 1 1 0 0 13 0 1515.6954 P63261;P60709;Q6S8J3;A5A3E0;P0CG38;Q9BYX7;P0CG39 P63261 360 372 ACTG1;ACTB;POTEE;POTEF;POTEI;POTEKP;POTEJ Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J yes no 2 1.7354E-09 138.25 By MS/MS By MS/MS 1 1 16297000 7961300 8335600 4547 1928 5175 11429;11430 11127;11128;11129 11129 3 QFCQEGQPHVLEALSPPQTSGLSPSR GDDKHMFKQFCQEGQP TSGLSPSRLSKSQGGE K Q F S R L 1 1 0 0 1 4 2 2 1 0 3 0 0 1 4 4 1 0 0 1 0 0 26 0 2849.3766 E9PR76;E9PSH4;Q9H063 E9PR76 46 71 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog yes no 3 0.011872 46.671 By MS/MS 1 12324000 12324000 0 4548 928 5176 11431 11130 11130 1728;1729 1 QFEMENSLSDPENEQTVQK PRIFLKQKQFEMENSL ENEQTVQKRKSNVVIQ K Q F Q K R 0 0 2 1 0 3 4 0 0 0 1 1 1 1 1 2 1 0 0 1 0 0 19 0 2251.9903 A0A075B754;Q96QE3 A0A075B754 348 366 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.015394 51.089 By matching By MS/MS 1 1 18776000 13393000 5382700 4549 18 5177 11432;11433 11131 11131 6 34 1 QFIAAQNLGPASGHGTPASSPSSSSLPSPMSPTPR SFNYARPKQFIAAQNL SPMSPTPRQFGRAPVP K Q F P R Q 4 1 1 0 0 2 0 3 1 1 2 0 1 1 7 9 2 0 0 0 0 0 35 0 3418.6576 Q8WX93 Q8WX93 736 770 PALLD Palladin yes yes 3 0.00058779 60.101 By MS/MS By MS/MS 2 3 50304000 24671000 25633000 4550 2566 5178;5179;5180 11434;11435;11436;11437;11438 11132;11133;11134 11133 1028 5258;5259;7752 3 QFLISPPASPPVGWK LLPPQPVKQFLISPPA ASPPVGWKQSEDAMPV K Q F W K Q 1 0 0 0 0 1 0 1 0 1 1 1 0 1 4 2 0 1 0 1 0 0 15 0 1622.8821 H0YF64;V9GYW9;E9PD55;E9PDJ2;Q9UKA8;P53805 H0YF64 11 25 RCAN3;RCAN1 Calcipressin-3;Calcipressin-1 yes no 2 9.4131E-12 143.93 By MS/MS By MS/MS 1 1 23106000 12707000 10399000 4551 852 5181 11439;11440 11135;11136;11137 11136 1582;1583 3 QFPPSPSAPK KGLLLNRRQFPPSPSA PPSPSAPKIPSWQIPV R Q F P K I 1 0 0 0 0 1 0 0 0 0 0 1 0 1 4 2 0 0 0 0 0 0 10 0 1054.5447 O75381 O75381 228 237 PEX14 Peroxisomal membrane protein PEX14 yes yes 2 0.0095295 75.788 By MS/MS 2 12791000 0 12791000 4552 1542 5182 11441;11442 11138;11139 11139 2912;2913 2 QFSPTMSPTLSSITQGVPLDTSK RSQQQLPKQFSPTMSP GVPLDTSKLSTDQRLP K Q F S K L 0 0 0 1 0 2 0 1 0 1 2 1 1 1 3 5 4 0 0 1 0 0 23 0 2421.2097 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 454 476 CRTC2 CREB-regulated transcription coactivator 2 yes no 3 0.028766 44.555 By MS/MS 1 2755400 2755400 0 4553 2200 5183 11443 11140 11140 882 0 QFSTASDHEQPGVSG KDQKKVERQFSTASDH HEQPGVSG________ R Q F S G - 1 0 0 1 0 2 1 2 1 0 0 0 0 1 1 3 1 0 0 1 0 0 15 0 1545.6696 Q66K14;G3V133 Q66K14 1236 1250 TBC1D9B TBC1 domain family member 9B yes no 2 0.029602 59.68 By matching By MS/MS 1 1 33472000 19863000 13609000 4554 2287 5184 11444;11445 11141 11141 1 QFYDQALQQAVVDDDANNAK DQIAKDVKQFYDQALQ DDDANNAKAVVKTFHE K Q F A K A 4 0 2 4 0 4 0 0 0 0 1 1 0 1 0 0 0 0 1 2 0 0 20 0 2252.0346 E9PM31;H0YEE2;E9PJK1;E9PRJ8;H0YDL9;H0YDJ9;E9PIF1;A6NMH8;P60033 E9PM31 54 73 CD81 Tetraspanin;CD81 antigen yes no 2 0.0067268 75.998 By MS/MS 1 7020800 0 7020800 4555 479 5185 11446 11142 11142 0 QGAIYHGLATLLNQPSPMMQR VVTLEVAKQGAIYHGL QPSPMMQRISDRRGSG K Q G Q R I 2 1 1 0 0 3 0 2 1 1 3 0 2 0 2 1 1 0 1 0 0 0 21 0 2325.1722 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1051 1071 MLLT4 Afadin yes no 3 2.6167E-05 120.08 By MS/MS By MS/MS 2 2 121630000 71987000 49641000 4556 494 5186;5187 11447;11448;11449;11450 11143;11144;11145;11146;11147 11143 193;194 902 5 QGDDEQSDWFYEK LFTNDEGRQGDDEQSD QSDWFYEKESGGACGI R Q G E K E 0 0 0 3 0 2 2 1 0 0 0 1 0 1 0 1 0 1 1 0 0 0 13 0 1645.6532 Q9NW75 Q9NW75 278 290 GPATCH2 G patch domain-containing protein 2 yes yes 2 0.0082571 75.998 By matching By MS/MS 1 1 18174000 9007400 9167100 4557 2929 5188 11451;11452 11148 11148 6182 1 QGLAETASPVAVSLR LMAEHQRRQGLAETAS SPVAVSLRSDGSENLC R Q G L R S 3 1 0 0 0 1 1 1 0 0 2 0 0 0 1 2 1 0 0 2 0 0 15 0 1497.8151 A6NNN6;E7ETA6;Q15154 A6NNN6 855 869 PCM1 Pericentriolar material 1 protein yes no 2 0.00010701 118.19 By MS/MS By MS/MS 1 1 14416000 7625300 6790900 4558 484 5189 11453;11454 11149;11150 11150 876 2 QGMRLEVVDKSQVSR ESMKYPFRQGMRLEVV VDKSQVSRTRMAVVDT R Q G S R T 0 2 0 1 0 2 1 1 0 0 1 1 1 0 0 2 0 0 0 3 0 0 15 2 1730.9098 Q969R5 Q969R5 325 339 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 yes yes 2 0.0221 53.981 By matching By MS/MS 1 1 7999600 4144200 3855300 4559 2615 5190 11455;11456 11151 11151 1049 5381;5382 0 QGNFFASPMLK KSATNLGRQGNFFASP FFASPMLK________ R Q G L K - 1 0 1 0 0 1 0 1 0 0 1 1 1 2 1 1 0 0 0 0 0 0 11 0 1238.6118 Q9H0H5 Q9H0H5 622 632 RACGAP1 Rac GTPase-activating protein 1 yes yes 2 0.0022465 77.527 By MS/MS By matching 1 1 8758200 4732700 4025500 4560 2803 5191 11457;11458 11152 11152 1111 5862 1 QGPSPVSPNALDR LKPRAVHKQGPSPVSP VSPNALDRTAAWLLTM K Q G D R T 1 1 1 1 0 1 0 1 0 0 1 0 0 0 3 2 0 0 0 1 0 0 13 0 1336.6735 H0Y3A3;Q5VWQ8 H0Y3A3 898 910 DAB2IP Disabled homolog 2-interacting protein yes no 2 0.0092663 85.976 By MS/MS By matching 1 1 19913000 16709000 3203600 4561 1116 5192 11459;11460 11153 11153 2111 0 QGPVSQSATQQPVTADKQQGHEPVSPR KVSTPVVKQGPVSQSA GHEPVSPRSLQRSSSQ K Q G P R S 2 1 0 1 0 6 1 2 1 0 0 1 0 0 4 3 2 0 0 3 0 0 27 1 2856.4114 A0A0A0MRT2;Q9BTA9 A0A0A0MRT2 335 361 WAC WW domain-containing adapter protein with coiled-coil yes no 4 0.0033057 52.754 By MS/MS By matching 1 1 41515000 20766000 20749000 4562 229 5193 11461;11462 11154 11154 6898 1 QGQSQAASSSSVTSPIK AQVEQQHKQGQSQAAS SSVTSPIKMKIPIANT K Q G I K M 2 0 0 0 0 3 0 1 0 1 0 1 0 0 1 6 1 0 0 1 0 0 17 0 1661.822 O60583 O60583 467 483 CCNT2 Cyclin-T2 yes yes 2 7.1706E-05 122.75 By MS/MS By matching 1 1 44651000 25506000 19145000 4563 1523 5194 11463;11464 11155 11155 2875;2876 1 QGSDEWGGPAELGPGEAGPGWQDKPPR PEPSYHSRQGSDEWGG GWQDKPPRENGHVPFH R Q G P R E 2 1 0 2 0 2 3 7 0 0 1 1 0 0 5 1 0 2 0 0 0 0 27 1 2774.2685 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3;M0QY61 M0QZ22 170 196 SAMD4B Protein Smaug homolog 2 yes no 3 1.7474E-05 78.837 By MS/MS By MS/MS 2 2 88217000 47491000 40727000 4564 1411 5195 11465;11466;11467;11468 11156;11157;11158;11159 11159 2588 4 QGSFTIEKPSPNIPIELIPHINK ESSKSLVRQGSFTIEK ELIPHINKQTSSTPSS R Q G N K Q 0 0 2 0 0 1 2 1 1 5 1 2 0 1 4 2 1 0 0 0 0 0 23 1 2571.4061 H0Y2V6;Q5SW79 H0Y2V6 800 822 CEP170 Centrosomal protein of 170 kDa yes no 3;4 1.16E-05 96.38 By MS/MS By MS/MS 2 2 304880000 141390000 163500000 4565 1112 5196 11469;11470;11471;11472 11160;11161;11162;11163 11162 2096 4 QGSGRESPSLASR EKHSAVQRQGSGRESP ESPSLASREGKYIPLP R Q G S R E 1 2 0 0 0 1 1 2 0 0 1 0 0 0 1 4 0 0 0 0 0 0 13 1 1330.6589 Q8WWM7;H3BUF6;H3BSK9 Q8WWM7 333 345 ATXN2L Ataxin-2-like protein yes no 2 0.0064013 84.507 By MS/MS By matching 1 1 62768000 34038000 28730000 4566 2564 5197 11473;11474 11164 11164 5245 1 QGSGSSQPMEVQEGYGFGSGDDPYSSAEPHVSGVK RAPGPLSKQGSGSSQP EPHVSGVKRSRSGEGE K Q G V K R 1 0 0 2 0 3 3 7 1 0 0 1 1 1 3 7 0 0 2 3 0 0 35 0 3556.5325 Q13263 Q13263 435 469 TRIM28 Transcription intermediary factor 1-beta yes yes 3 2.0126E-05 66.786 By MS/MS By MS/MS 4 4 317170000 166760000 150400000 4567 2054 5198;5199 11475;11476;11477;11478;11479;11480;11481;11482 11165;11166;11167;11168;11169;11170;11171 11171 818 4034;4035;4036;4037 7 QGSGSSQPMEVQEGYGFGSGDDPYSSAEPHVSGVKR RAPGPLSKQGSGSSQP PHVSGVKRSRSGEGEV K Q G K R S 1 1 0 2 0 3 3 7 1 0 0 1 1 1 3 7 0 0 2 3 0 0 36 1 3712.6336 Q13263 Q13263 435 470 TRIM28 Transcription intermediary factor 1-beta yes yes 3;4 9.4241E-06 67.033 By MS/MS By MS/MS 2 2 85278000 45324000 39954000 4568 2054 5200 11483;11484;11485;11486 11172;11173;11174;11175 11174 818 4034;4035;4036;4037 4 QGSITSPQANEQSVTPQRR VKSGTPPRQGSITSPQ QSVTPQRRSCFESSPD R Q G R R S 1 2 1 0 0 4 1 1 0 1 0 0 0 0 2 3 2 0 0 1 0 0 19 1 2083.0406 Q9UQ35;I3L4D8;I3L182 Q9UQ35 852 870 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0084159 56.768 By MS/MS By matching 1 1 39964000 22371000 17593000 4569 3074 5201 11487;11488 11176 11176 6541;7931 1 QGSNPHESDPLQGSAALSPR SKFKKLLKQGSNPHES GSAALSPRSPALPPVW K Q G P R S 2 1 1 1 0 2 1 2 1 0 2 0 0 0 3 4 0 0 0 0 0 0 20 0 2046.9719 G3V471;P56179 G3V471 100 119 DLX6 Homeobox protein DLX-6 yes no 3 0.0069537 55.634 By MS/MS 1 6009600 6009600 0 4570 1078 5202 11489 11177 11177 2035 1 QGSPDQVSPVSEMTSTSLYQDKQEGK PFEEKSGKQGSPDQVS YQDKQEGKSTDFAPIK K Q G G K S 0 0 0 2 0 4 2 2 0 0 1 2 1 0 2 5 2 0 1 2 0 0 26 1 2825.3025 P46821 P46821 1436 1461 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 7.1936E-07 101.89 By MS/MS By MS/MS 2 2 35021000 14730000 20291000 4571 1840 5203;5204 11490;11491;11492;11493 11178;11179;11180 11179 3500;3501 3 QGSPVAAGAPAK FGSRGQPRQGSPVAAG VAAGAPAKQQQVDIPL R Q G A K Q 4 0 0 0 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 12 0 1052.5615 Q9NZI8 Q9NZI8 179 190 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 6.3566E-11 147.58 By MS/MS By MS/MS 1 1 1128900000 543420000 585450000 4572 2959 5205 11494;11495 11181;11182;11183;11184;11185;11186 11183 6232 6 QHEAPSNRPLNELLTPQGPSPR QDLSGGSRQHEAPSNR TPQGPSPRTQHCDPEH R Q H P R T 1 2 2 0 0 2 2 1 1 0 3 0 0 0 5 2 1 0 0 0 0 0 22 1 2437.2462 P10398;Q96II5 P10398 167 188 ARAF Serine/threonine-protein kinase A-Raf yes no 3 0.0064156 73.213 By matching By MS/MS 2 2 50612000 28246000 22366000 4573 1673 5206;5207 11496;11497;11498;11499 11187;11188 11187 3159;7384 2 QHNSLERAFHSAPGRPANPSK ETIEQLAKQHNSLERA GRPANPSKSFIEGSLL K Q H S K S 3 2 2 0 0 1 1 1 2 0 1 1 0 1 3 3 0 0 0 0 0 0 21 2 2300.1523 Q6ZN50;C9JS84;H7C313;H7C1R2;H7C368;H7C428;A0A0A0MSB4;Q969R2 Q6ZN50 236 256 OSBP2 Oxysterol-binding protein;Oxysterol-binding protein 2 yes no 3 0.026692 52.19 By MS/MS 1 0 0 0 4574 2349 5208 11500 11189 11189 4767;4768 1 QHYLSSEDEPDDNPDVLDSR HMPKRKRKQHYLSSED NPDVLDSRIETAQRQC K Q H S R I 0 1 1 5 0 1 2 0 1 0 2 0 0 0 2 3 0 0 1 1 0 0 20 0 2329.9935 Q8NFC6 Q8NFC6 2775 2794 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.0010923 69.986 By MS/MS By matching 1 1 23567000 12735000 10832000 4575 2517 5209 11501;11502 11190 11190 8403 1 QIANSQDGYVWQVTDMNR QMQPLNEKQIANSQDG WQVTDMNRLHRFLCFG K Q I N R L 1 1 2 2 0 3 0 1 0 1 0 0 1 0 0 1 1 1 1 2 0 0 18 0 2123.9695 D6RDN1;D6RE09;P10155 D6RDN1 15 32 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 2 0.024006 48.376 By MS/MS By matching 1 1 17622000 10608000 7013800 4576 759 5210 11503;11504 11191;11192 11191 290 1368 2 QIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFK EELTEKCKQIAQSKED PFYHHPFKLSEPKPIF K Q I F K L 1 0 1 4 0 2 6 0 3 2 0 3 0 2 4 2 0 0 1 3 0 0 34 2 4031.8814 P18583;H7C1M2;H7C2G8;J3QSZ5 P18583 2111 2144 SON Protein SON yes no 4 1.9314E-06 70.535 By matching By MS/MS 1 1 82754000 46566000 36189000 4577 1725 5211 11505;11506 11193 11193 3240 1 QICLVMLETLSQSPQGR QSVTECVKQICLVMLE LSQSPQGRVMTIPYQP K Q I G R V 0 1 0 0 1 3 1 1 0 1 3 0 1 0 1 2 1 0 0 1 0 0 17 0 1958.9918 Q15365 Q15365 161 177 PCBP1 Poly(rC)-binding protein 1 yes yes 2;3 2.9043E-91 216.19 By MS/MS By MS/MS 5 5 450220000 225760000 224460000 4578 2133 5212;5213 11507;11508;11509;11510;11511;11512;11513;11514;11515;11516 11194;11195;11196;11197;11198;11199;11200;11201;11202;11203 11203 852 4220;4221 10 QICVVMLETLSQSPPK QSIIECVKQICVVMLE TLSQSPPKGVTIPYRP K Q I P K G 0 0 0 0 1 2 1 0 0 1 2 1 1 0 2 2 1 0 0 2 0 0 16 0 1828.9427 Q15366;H3BRU6;F8VZX2 Q15366 161 176 PCBP2 Poly(rC)-binding protein 2 yes no 2;3 8.7724E-43 178.23 By MS/MS By MS/MS 3 5 102360000 58070000 44294000 4579 2134 5214;5215 11517;11518;11519;11520;11521;11522;11523;11524 11204;11205;11206;11207;11208;11209;11210;11211;11212;11213;11214;11215 11206 859 4233;7596 12 QIDSSPVGGETDETTVSQNYR EASGSFFKQIDSSPVG TTVSQNYRGSVSQPST K Q I Y R G 0 1 1 2 0 2 2 2 0 1 0 0 0 0 1 3 3 0 1 2 0 0 21 0 2282.0299 F1T0I1;J3KNL6;O15027 F1T0I1 565 585 SEC16A Protein transport protein Sec16A yes no 2;3 4.1725E-07 129.38 By MS/MS By MS/MS 2 2 210050000 97440000 112610000 4580 930 5216 11525;11526;11527;11528 11216;11217;11218 11217 1743;1744 3 QIEINNNSK SSSSSNTRQIEINNNS IEINNNSKEVNWNLHK R Q I S K E 0 0 3 0 0 1 1 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 9 0 1058.5356 Q8WZ74;H0Y448 Q8WZ74 1638 1646 CTTNBP2 Cortactin-binding protein 2 yes no 2 0.032085 40.067 By MS/MS 1 0 0 0 4581 2577 5217 11529 11219 11219 1 QIFLGGVDK FAFKDKYKQIFLGGVD IFLGGVDKHTQFWRYF K Q I D K H 0 0 0 1 0 1 0 2 0 1 1 1 0 1 0 0 0 0 0 1 0 0 9 0 975.53893 P12236;P05141 P12236 97 105 SLC25A6;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 2 0.027562 74.376 By MS/MS By matching 1 1 16517000 8800300 7716600 4582 1639 5218 11530;11531 11220 11220 1 QIKIGFSAANVPQTDK Q I D K 2 0 1 1 0 2 0 1 0 2 0 2 0 1 1 1 1 0 0 1 0 0 16 1 1715.9206 REV__F8VZC4 yes no 2 0.0033383 88.092 By matching By MS/MS 1 2 25388000 12226000 13162000 + 4583 3172 5219 11532;11533;11534 11221 11221 6768;7960 1 QISLPDLSQEEPQLK FFEKAPSRQISLPDLS SQEEPQLKTPALANEE R Q I L K T 0 0 0 1 0 3 2 0 0 1 3 1 0 0 2 2 0 0 0 0 0 0 15 0 1723.8992 H0YBZ4;Q15390 H0YBZ4 75 89 MTFR1 Mitochondrial fission regulator 1 yes no 2;3 9.3856E-54 191.44 By MS/MS By MS/MS 2 2 93951000 50894000 43058000 4584 1166 5220 11535;11536;11537;11538 11222;11223;11224;11225;11226 11225 2212 5 QISQAYEVLSDAK PNEGEKFKQISQAYEV YEVLSDAKKRELYDKG K Q I A K K 2 0 0 1 0 2 1 0 0 1 1 1 0 0 0 2 0 0 1 1 0 0 13 0 1450.7304 P31689 P31689 47 59 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2 0.014986 77.593 By MS/MS By MS/MS 1 1 6301700 2897800 3404000 4585 1784 5221 11539;11540 11227;11228 11227 2 QISQDVKLEPDILLR ERRQRLERQISQDVKL LEPDILLRAKQDFLKT R Q I L R A 0 1 0 2 0 2 1 0 0 2 3 1 0 0 1 1 0 0 0 1 0 0 15 1 1765.9938 H0Y360;Q01433;H0YCL9;E9PIJ1;E9PJF6 H0Y360 137 151 AMPD2 AMP deaminase 2 yes no 2;3 5.1541E-22 162.7 By MS/MS By MS/MS 2 2 206400000 119310000 87095000 4586 1114 5222 11541;11542;11543;11544 11229;11230;11231;11232 11232 2105 4 QISYNYSDLDQSNVTEETPEGEEHHPVADTENK ESPKYIQKQISYNYSD PVADTENKENEVEEVK K Q I N K E 1 0 3 3 0 2 6 1 2 1 1 1 0 0 2 3 3 0 2 2 0 0 33 0 3774.6405 Q8NC51 Q8NC51 241 273 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3;4 1.5582E-09 85.775 By MS/MS By MS/MS 2 2 277630000 164110000 113520000 4587 2498 5223 11545;11546;11547;11548 11233;11234;11235;11236 11234 5098 4 QITMEELVR LTFRGLRKQITMEELV ITMEELVRSQVMDEAT K Q I V R S 0 1 0 0 0 1 2 0 0 1 1 0 1 0 0 0 1 0 0 1 0 0 9 0 1117.5801 Q15149 Q15149 4028 4036 PLEC Plectin yes yes 2 0.0092572 73.9 By MS/MS By matching 1 1 10853000 6065500 4787300 4588 2130 5224 11549;11550 11237 11237 848 7593 1 QITQEEDDSDEEVAPENFFSLPEK SAALQVTKQITQEEDD NFFSLPEKAEPPGVEP K Q I E K A 1 0 1 3 0 2 6 0 0 1 1 1 0 2 2 2 1 0 0 1 0 0 24 0 2795.2297 Q92733 Q92733 259 282 PRCC Proline-rich protein PRCC yes yes 2 2.3602E-192 248.33 By MS/MS By MS/MS 1 1 225560000 144080000 81480000 4589 2597 5225 11551;11552 11238;11239 11238 5335 2 QITQVYGFYDECQTKYGNANAWR LRGNHESRQITQVYGF YGNANAWRYCTKVFDM R Q I W R Y 2 1 2 1 1 3 1 2 0 1 0 1 0 1 0 0 2 1 3 1 0 0 23 1 2811.2711 O00743 O00743 118 140 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes yes 3 0.0079841 65.521 By MS/MS 1 1435000 0 1435000 4590 1445 5226 11553 11240 11240 1 QITTSPITVR DSGDKEKKQITTSPIT TTSPITVRKNKKDEER K Q I V R K 0 1 0 0 0 1 0 0 0 2 0 0 0 0 1 1 3 0 0 1 0 0 10 0 1114.6346 O95835 O95835 609 618 LATS1 Serine/threonine-protein kinase LATS1 yes yes 2 0.0031225 87.713 By MS/MS By MS/MS 1 1 123220000 67091000 56128000 4591 1611 5227 11554;11555 11241;11242 11242 3054 2 QITVNDLPVGR IDDKGILRQITVNDLP VNDLPVGRSVDETLRL R Q I G R S 0 1 1 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1210.667 A0A0A0MSI0;Q06830;A0A0A0MRQ5 A0A0A0MSI0 141 151 PRDX1 Peroxiredoxin-1 no no 2 2.1168E-05 128.86 By MS/MS By MS/MS 1 1 49390000 26413000 22977000 4592 247 5228 11556;11557 11243;11244 11244 2 QIVGTPVNSEDSDTR KIVPGNEKQIVGTPVN NSEDSDTRQTSHLQAR K Q I T R Q 0 1 1 2 0 1 1 1 0 1 0 0 0 0 1 2 2 0 0 2 0 0 15 0 1616.7642 J3KP30;Q5QJE6 J3KP30 228 242 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 0.031231 79.652 By MS/MS 1 0 0 0 4593 1325 5229 11558 11245 11245 1 QIYLSENPEETAAR CTINNISKQIYLSENP NPEETAARVNQSALEA K Q I A R V 2 1 1 0 0 1 3 0 0 1 1 0 0 0 1 1 1 0 1 0 0 0 14 0 1619.7791 Q9UKG1 Q9UKG1 376 389 APPL1 DCC-interacting protein 13-alpha yes yes 2 0.016675 73.632 By MS/MS By MS/MS 1 1 14798000 8388900 6409400 4594 3024 5230 11559;11560 11246;11247 11246 8497 2 QKFNDSEGDDTEETEDYR FSDKESGKQKFNDSEG TEETEDYRQFRKSVLA K Q K Y R Q 0 1 1 4 0 1 4 1 0 0 0 1 0 1 0 1 2 0 1 0 0 0 18 1 2176.8669 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 392 409 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 5.6191E-107 223.06 By MS/MS By MS/MS 2 3 912430000 450990000 461440000 4595 2947 5231;5232 11561;11562;11563;11564;11565 11248;11249;11250;11251;11252 11250 6216 5 QKSDAEEDGGTVSQEEEDR GEEKLEEKQKSDAEED VSQEEEDRKPKAEEDE K Q K D R K 1 1 0 3 0 2 5 2 0 0 0 1 0 0 0 2 1 0 0 1 0 0 19 1 2107.8778 P27824 P27824 552 570 CANX Calnexin yes yes 2;3 2.268E-06 131.31 By MS/MS By MS/MS 3 3 116080000 63216000 52860000 4596 1769 5233 11566;11567;11568;11569;11570;11571 11253;11254;11255;11256;11257 11253 3334;3335;7417 5 QKSEEPSVSIPFLQTALLR VPHGKLLKQKSEEPSV FLQTALLRSSGSLGHR K Q K L R S 1 1 0 0 0 2 2 0 0 1 3 1 0 1 2 3 1 0 0 1 0 0 19 1 2142.1685 H0Y2V6;Q5SW79;H0YB66 H0Y2V6 408 426 CEP170 Centrosomal protein of 170 kDa yes no 2;3 0.0031876 69.747 By MS/MS By MS/MS 2 2 74740000 41145000 33595000 4597 1112 5234 11572;11573;11574;11575 11258;11259 11259 2097 2 QKSFQDNQLSTHNEVPNER KTEVEVKKQKSFQDNQ HNEVPNERLVVEHQES K Q K E R L 0 1 3 1 0 3 2 0 1 0 1 1 0 1 1 2 1 0 0 1 0 0 19 1 2270.0676 Q96M83 Q96M83 698 716 CCDC7 Coiled-coil domain-containing protein 7 yes yes 2 0.00925 57.173 By MS/MS 1 15410000 0 15410000 4598 2684 5235 11576 11260 11260 5543;7799 1 QKSLTLTPTR KKDINRERQKSLTLTP SLTLTPTRSDSSEGFL R Q K T R S 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 1 3 0 0 0 0 0 10 1 1143.6612 H0Y7K3;H0Y470;H7C2C6;Q3V6T2;H0Y7U8 H0Y7K3 40 49 CCDC88A Girdin yes no 2 0.019775 74.376 By MS/MS 1 11041000 11041000 0 4599 1119 5236 11577 11261 11261 2125 1 QKSPAQSDSTTQR GSESGRGRQKSPAQSD QSDSTTQRRTVGKKQP R Q K Q R R 1 1 0 1 0 3 0 0 0 0 0 1 0 0 1 3 2 0 0 0 0 0 13 1 1432.6906 Q9UHB7 Q9UHB7 547 559 AFF4 AF4/FMR2 family member 4 yes yes 2 0.0019622 101.45 By matching By MS/MS 1 1 14373000 7190600 7182700 4600 3004 5237 11578;11579 11262 11262 6332 1 QKSPEIHR ATEEHSTRQKSPEIHR QKSPEIHRRIDISPST R Q K H R R 0 1 0 0 0 1 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 0 8 1 993.53558 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 646 653 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0040585 83.883 By MS/MS By MS/MS 2 3 475570000 87377000 388200000 4601 2947 5238 11580;11581;11582;11583;11584 11263;11264;11265;11266;11267;11268 11264 6217 6 QKSYTLVVAK FIPPWLKKQKSYTLVV SYTLVVAKDGGDKKEP K Q K A K D 1 0 0 0 0 1 0 0 0 0 1 2 0 0 0 1 1 0 1 2 0 0 10 1 1135.6601 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 85 94 EPB41L2 Band 4.1-like protein 2 yes no 3 0.0020351 80.871 By MS/MS By MS/MS 1 1 25255000 15400000 9854900 4602 1502 5239 11585;11586 11269;11270 11269 2810;7316 2 QKTVDIDDAQILPR EKARSIVRQKTVDIDD DDAQILPRSTRVRHFS R Q K P R S 1 1 0 3 0 2 0 0 0 2 1 1 0 0 1 0 1 0 0 1 0 0 14 1 1610.8628 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 752 765 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 2;3 9.7759E-05 118.76 By MS/MS By MS/MS 2 2 24798000 12553000 12245000 4603 420 5240 11587;11588;11589;11590 11271;11272;11273;11274 11271 6953 4 QKVDSLLENLEK KKELTQIKQKVDSLLE SLLENLEKIEKEQSKQ K Q K E K I 0 0 1 1 0 1 2 0 0 0 3 2 0 0 0 1 0 0 0 1 0 0 12 1 1414.7668 G3V2Q1;P07910;G3V5V7;G3V576;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4C1;B2R5W2;G3V2D6;G3V4W0;B4DY08 G3V4C1 205 216 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 no no 3 4.2065E-60 188.15 By MS/MS By MS/MS 1 1 3395300 3395300 0 4604 1069;1079 5241 11591;11592 11275;11276 11276 2 QKYTQSNGRR TRFIATLKQKYTQSNG YTQSNGRRPFGISALI K Q K R R P 0 2 1 0 0 2 0 1 0 0 0 1 0 0 0 1 1 0 1 0 0 0 10 2 1236.6323 A0A087WYS6;Q8TAA3 A0A087WYS6 92 101 PSMA8 Proteasome subunit alpha type-7-like yes no 2 0.026197 47.869 By MS/MS 1 0 0 0 4605 127 5242 11593 11277 11277 215 1 QLAALCYRCLALLYWR PNATPEDKQLAALCYR CLALLYWRMFRLKRDH K Q L W R M 3 2 0 0 2 1 0 0 0 0 5 0 0 0 0 0 0 1 2 0 0 0 16 1 2069.0703 P51826;H7C4C2 P51826 1059 1074 AFF3 AF4/FMR2 family member 3 yes no 3 0.0038247 79.466 By MS/MS 1 0 0 0 4606 1880 5243 11594 11278 11278 8294 1 QLAPIWDK APWCGHCKQLAPIWDK QLAPIWDKLGETYKDH K Q L D K L 1 0 0 1 0 1 0 0 0 1 1 1 0 0 1 0 0 1 0 0 0 0 8 0 969.52837 P07237;H0Y3Z3;H7BZ94 P07237 402 409 P4HB Protein disulfide-isomerase yes no 2 0.030994 78.516 By MS/MS 1 1344900 1344900 0 4607 1651 5244 11595 11279 11279 1 QLAYALNYLEDKGLPHGNVSARK SWKLQVVKQLAYALNY HGNVSARKVLLAREGA K Q L R K V 3 1 2 1 0 1 1 2 1 0 4 2 0 0 1 1 0 0 2 1 0 0 23 2 2556.3449 P52333 P52333 630 652 JAK3 Tyrosine-protein kinase JAK3 yes yes 3 0.018354 45.992 By MS/MS 1 98720000 0 98720000 4608 1885 5245 11596 11280 11280 3651;8295 1 QLEHVMDSAAEDPQSPK NEYNFKMRQLEHVMDS AEDPQSPKTPPHFQTH R Q L P K T 2 0 0 2 0 2 2 0 1 0 1 1 1 0 2 2 0 0 0 1 0 0 17 0 1880.8574 C9JKA9;Q9NS87 C9JKA9 762 778 KIF15 Kinesin-like protein KIF15 yes no 2 0.010222 68.261 By MS/MS By MS/MS 1 1 10077000 5287000 4790000 4609 671 5246 11597;11598 11281;11282 11282 1240 2 QLHLEGASLELSDDDTESK SSSRSGRRQLHLEGAS SDDDTESKTSDVNETQ R Q L S K T 1 0 0 3 0 1 3 1 1 0 4 1 0 0 0 3 1 0 0 0 0 0 19 0 2085.9702 P35580 P35580 1945 1963 MYH10 Myosin-10 yes yes 2;3 1.624E-85 200.94 By MS/MS By MS/MS 5 4 395300000 188270000 207030000 4610 1796 5247;5248 11599;11600;11601;11602;11603;11604;11605;11606;11607 11283;11284;11285;11286;11287;11288;11289;11290;11291;11292;11293;11294;11295 11284 3391;3392;7432 13 QLIVGVNK LAYTLGVKQLIVGVNK QLIVGVNKMDSTEPPY K Q L N K M 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 869.53345 Q5VTE0;P68104;A0A087WV01 Q5VTE0 147 154 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha no no 2 0.0077404 119.56 By MS/MS By MS/MS 1 1 27316000 12264000 15052000 4611 1956 5249 11608;11609 11296;11297 11296 2 QLKPMEINPEMLNK ________________ INPEMLNKVLSRLGVA M Q L N K V 0 0 2 0 0 1 2 0 0 1 2 2 2 0 2 0 0 0 0 0 0 0 14 1 1683.8688 D6RF53;D6R974;D6RE83;D6R956;P09936 D6RF53 2 15 UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 3 0.0054384 67.952 By matching By MS/MS 1 1 9814300 5860700 3953600 4612 726 5250 11610;11611 11298 11298 1 QLLDSDEEQEEDEGR LKAAPKKRQLLDSDEE EQEEDEGRNRAPELGA R Q L G R N 0 1 0 3 0 2 5 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 15 0 1790.7442 Q9UNS1 Q9UNS1 1169 1183 TIMELESS Protein timeless homolog yes yes 2;3 4.1187E-16 151.38 By MS/MS By MS/MS 3 3 411680000 219530000 192150000 4613 3061 5251 11612;11613;11614;11615;11616;11617 11299;11300;11301;11302 11299 6461 4 QLLLQQQTSGLKSPK QQALQAARQLLLQQQT TSGLKSPKSSDKQRPL R Q L P K S 0 0 0 0 0 4 0 1 0 0 4 2 0 0 1 2 1 0 0 0 0 0 15 1 1667.957 A8MUV4;A0A0U1RQR8;A0A0U1RQY3;A0A0U1RQM2;O15409;A0A0U1RQE0;C9JQP8;Q8N6B5 A8MUV4 63 77 FOXP2 Forkhead box protein P2 yes no 3 0.0015299 78.401 By MS/MS By MS/MS 1 1 13231000 6142700 7088100 4614 385 5252 11618;11619 11303;11304 11303 709 2 QLLLTADDR EENRRFYRQLLLTADD LLLTADDRVNPCIGGV R Q L D R V 1 1 0 2 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1043.5611 J3KPS3;P04075;H3BQN4;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 J3KPS3 61 69 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.024555 76.221 By MS/MS By MS/MS 1 1 45881000 24747000 21134000 4615 1327 5253 11620;11621 11305;11306 11305 2 QLLTLSSELSQAR EKNERVQRQLLTLSSE SSELSQARDENKRTHN R Q L A R D 1 1 0 0 0 2 1 0 0 0 4 0 0 0 0 3 1 0 0 0 0 0 13 0 1444.7886 E7EQR4;P15311 E7EQR4 530 542 EZR Ezrin yes no 2 6.8818E-58 203.74 By MS/MS By MS/MS 2 1 26564000 14772000 11792000 4616 808 5254 11622;11623;11624 11307;11308;11309;11310 11310 1442;1443 3 QLMEQDASSSPSAQVIGLK SAEREKLKQLMEQDAS SAQVIGLKNALSSALA K Q L L K N 2 0 0 1 0 3 1 1 0 1 2 1 1 0 1 4 0 0 0 1 0 0 19 0 1987.9885 Q9H4L5 Q9H4L5 363 381 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 2 6.6191E-07 128.35 By MS/MS By MS/MS 3 2 44721000 27853000 16868000 4617 2833 5255;5256 11625;11626;11627;11628;11629 11311;11312;11313 11312 1128 5944;5945;5946 3 QLPALDGSLMGPESPPAQEEEAPVSPHK RDEAGPQRQLPALDGS EAPVSPHKKPAPQKRR R Q L H K K 3 0 0 1 0 2 4 2 1 0 3 1 1 0 6 3 0 0 0 1 0 0 28 0 2910.4069 Q8N9T8 Q8N9T8 615 642 KRI1 Protein KRI1 homolog yes yes 3 6.5778E-07 82.639 By MS/MS By MS/MS 2 2 96129000 49004000 47125000 4618 2490 5257;5258 11630;11631;11632;11633 11314;11315;11316;11317 11314 1008 5080;5081;5082 4 QLPLEPESPSGQVGPR MKNATSSKQLPLEPES PSGQVGPRPAPPQEES K Q L P R P 0 1 0 0 0 2 2 2 0 0 2 0 0 0 4 2 0 0 0 1 0 0 16 0 1689.8686 Q3KQU3;C9JIR3;E9PLH3 Q3KQU3 63 78 MAP7D1 MAP7 domain-containing protein 1 yes no 2 1.3306E-05 124.5 By MS/MS By MS/MS 1 1 58219000 27856000 30363000 4619 2187 5259 11634;11635 11318;11319 11318 4355;4356 2 QLPLEPESPSGQVGPRPAPPQEESPSSEAK MKNATSSKQLPLEPES ESPSSEAKSRGPTPPA K Q L A K S 2 1 0 0 0 3 5 2 0 0 2 1 0 0 8 5 0 0 0 1 0 0 30 1 3124.5313 Q3KQU3;C9JIR3;E9PLH3 Q3KQU3 63 92 MAP7D1 MAP7 domain-containing protein 1 yes no 3 0.00035598 62.404 By MS/MS By MS/MS 2 2 126930000 56630000 70296000 4620 2187 5260;5261 11636;11637;11638;11639 11320;11321;11322;11323 11321 4354;4355;4356 4 QLQALSSELAQAR QKNERVKKQLQALSSE SSELAQARDETKKTQN K Q L A R D 3 1 0 0 0 3 1 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 13 0 1413.7576 P35241 P35241 527 539 RDX Radixin yes yes 2 1.7811E-14 156.08 By MS/MS By MS/MS 1 1 20516000 10730000 9785900 4621 1792 5262 11640;11641 11324;11325 11325 3379 2 QLQASPGLGAGATR RGGDSAVRQLQASPGL GLGAGATRSGVGTGPP R Q L T R S 3 1 0 0 0 2 0 3 0 0 2 0 0 0 1 1 1 0 0 0 0 0 14 0 1325.7052 Q92630 Q92630 26 39 DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 2 yes yes 2 0.014025 68.972 By MS/MS By MS/MS 1 1 11789000 5543800 6245500 4622 2593 5263 11642;11643 11326;11327 11326 5328 2 QLQEDQENNLQDNQTSNSSPCR SKEKTLKRQLQEDQEN TSNSSPCRSNVGKGNI R Q L C R S 0 1 4 2 1 5 2 0 0 0 2 0 0 0 1 3 1 0 0 0 0 0 22 0 2604.1106 Q92576 Q92576 1596 1617 PHF3 PHD finger protein 3 yes yes 3 0.00015808 80.382 By MS/MS By MS/MS 1 1 60642000 31578000 29065000 4623 2585 5264 11644;11645 11328;11329 11329 5307;5308 2 QLQEYLAQGK ________________ QEYLAQGKAGGPAAAE R Q L G K A 1 0 0 0 0 3 1 1 0 0 2 1 0 0 0 0 0 0 1 0 0 0 10 0 1176.6139 Q587I9 Q587I9 7 16 SFT2D3 Vesicle transport protein SFT2C yes yes 2 0.0040355 105.1 By MS/MS By matching 1 1 7507000 3739300 3767800 4624 2208 5265 11646;11647 11330 11330 8363 1 QLQPKETQIYIK EAQFIPNKQLQPKETQ KETQIYIKLVKYAMQA K Q L I K L 0 0 0 0 0 3 1 0 0 2 1 2 0 0 1 0 1 0 1 0 0 0 12 1 1487.8348 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 295 306 TRRAP Transformation/transcription domain-associated protein yes no 2 0.013223 59.116 By MS/MS 1 46623000 46623000 0 4625 933 5266 11648 11331 11331 7126;8132 1 QLQSVAELEQK KKLNAMERQLQSVAEL SVAELEQKWQSEVDDA R Q L Q K W 1 0 0 0 0 3 2 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 0 1271.6721 F8VWT9;J3KPF0;Q9Y4D8 F8VWT9 1245 1255 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes no 1 0.0029376 80.014 By matching By MS/MS 1 1 72704000 4089000 68615000 4626 1021 5267 11649;11650 11332 11332 1912 1 QLRAHLEQVDKAVFHMQSVK STLYSLQKQLRAHLEQ VFHMQSVKCLKCQEQK K Q L V K C 2 1 0 1 0 3 1 0 2 0 2 2 1 1 0 1 0 0 0 3 0 0 20 2 2363.2532 Q9C0B0;K7EQ93 Q9C0B0 749 768 UNK RING finger protein unkempt homolog yes no 2 0.027968 48.112 By MS/MS 1 0 0 0 4627 2788 5268 11651 11333 11333 1104 1 QLSESESSLEMDDER ERREALCRQLSESESS SLEMDDERYFNEMSAQ R Q L E R Y 0 1 0 2 0 1 4 0 0 0 2 0 1 0 0 4 0 0 0 0 0 0 15 0 1753.7312 Q16204 Q16204 321 335 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 6.1707E-05 121.45 By MS/MS By MS/MS 3 3 181840000 99130000 82708000 4628 2161 5269;5270 11652;11653;11654;11655;11656;11657 11334;11335;11336;11337;11338;11339 11339 867 4289 6 QLSESFK SSSKSSSRQLSESFKS RQLSESFKSKEFVSSD R Q L F K S 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 7 0 837.42323 Q08945 Q08945 655 661 SSRP1 FACT complex subunit SSRP1 yes yes 2 0.026525 80.455 By MS/MS By MS/MS 2 2 35250000 19239000 16011000 4629 2015 5271 11658;11659;11660;11661 11340;11341;11342 11342 3884 3 QLSFISPPTPQPK RQIEERKKQLSFISPP SPPTPQPKTPSSSQPE K Q L P K T 0 0 0 0 0 2 0 0 0 1 1 1 0 1 4 2 1 0 0 0 0 0 13 0 1438.782 O43395 O43395 159 171 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 2 8.002E-11 141.65 By MS/MS By MS/MS 1 1 4335000 0 4335000 4630 1498 5272 11662;11663 11343;11344 11343 2798;7313 2 QLSKNEPIK Q L I K 0 0 1 0 0 1 1 0 0 1 1 2 0 0 1 1 0 0 0 0 0 0 9 1 1055.5975 REV__Q5T1W7 yes no 2 0.010927 85.161 By MS/MS By MS/MS 2 2 27010000 12821000 14189000 + 4631 3211 5273 11664;11665;11666;11667 11345;11346 11346 6809 2 QLSLEGSGLGVEDLK STKYDVFRQLSLEGSG GLGVEDLKDNTPSGKS R Q L L K D 0 0 0 1 0 1 2 3 0 0 4 1 0 0 0 2 0 0 0 1 0 0 15 0 1543.8094 Q9UMZ2 Q9UMZ2 750 764 SYNRG Synergin gamma yes yes 2 1.7699E-95 221.34 By MS/MS By MS/MS 1 1 52149000 27169000 24980000 4632 3056 5274 11668;11669 11347;11348 11348 6453 2 QLSLEGSGLGVEDLKDNTPSGK STKYDVFRQLSLEGSG KDNTPSGKSDDDFADF R Q L G K S 0 0 1 2 0 1 2 4 0 0 4 2 0 0 1 3 1 0 0 1 0 0 22 1 2243.1281 Q9UMZ2 Q9UMZ2 750 771 SYNRG Synergin gamma yes yes 3 1.9984E-06 125.19 By MS/MS By MS/MS 1 1 30001000 18315000 11686000 4633 3056 5275 11670;11671 11349;11350 11350 6453 2 QLSLPLTQSK GMRFKHQRQLSLPLTQ SLPLTQSKSSPKRGFF R Q L S K S 0 0 0 0 0 2 0 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 10 0 1113.6394 Q9C0I1 Q9C0I1 562 571 MTMR12 Myotubularin-related protein 12 yes yes 2 0.0031546 87.641 By MS/MS By matching 1 1 27636000 15453000 12182000 4634 2796 5276 11672;11673 11351 11351 5839 1 QLSMTLR DRMKKIKRQLSMTLRG RQLSMTLRGGRGIDKT R Q L L R G 0 1 0 0 0 1 0 0 0 0 2 0 1 0 0 1 1 0 0 0 0 0 7 0 847.45857 E5RJM2;E5RGN0;A0A087WZU2;Q00536;E5RIY8;E5RIU4;E5RJQ8;E5RGV7 E5RJM2 10 16 CDK16 Cyclin-dependent kinase 16 yes no 2 0.012092 62.582 By MS/MS By MS/MS 1 1 11805000 5914700 5890200 4635 146 5277 11674;11675 11352;11353 11352 56 238;6865 2 QLSNSAQAYLGHLTGFIQDNCNKGLHK STEEPWRKQLSNSAQA NCNKGLHKSQSSCLSG K Q L H K S 2 0 3 1 1 3 0 3 2 1 4 2 0 1 0 2 1 0 1 0 0 0 27 1 3013.4828 F5H3N7 F5H3N7 584 610 UTY yes yes 3 0.015959 40.404 By matching By MS/MS 1 1 31412000 16830000 14582000 4636 969 5278 11676;11677 11354 11354 1823 1 QLSPATQLAIQR VLVPAYAKQLSPATQL ATQLAIQRATPETGPE K Q L Q R A 2 1 0 0 0 3 0 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 12 0 1324.7463 G5E9D9;A0A0C4DFZ6;Q9H972 G5E9D9 42 53 C14orf93 Uncharacterized protein C14orf93 yes no 2 0.00030044 115.57 By MS/MS 1 4732700 4732700 0 4637 302 5279 11678 11355 11355 530 1 QLSPEDSSSPVK TCKFLTHKQLSPEDSS EDSSSPVKSVLDHQNN K Q L V K S 0 0 0 1 0 1 1 0 0 0 1 1 0 0 2 4 0 0 0 1 0 0 12 0 1272.6198 Q96AY2 Q96AY2 109 120 EME1 Crossover junction endonuclease EME1 yes yes 2 0.00067533 106.79 By MS/MS By MS/MS 1 1 9241400 4544100 4697300 4638 2623 5280 11679;11680 11356;11357 11356 5393;5394;5395 2 QLSSGVSEIR AYSRALSRQLSSGVSE SSGVSEIRHTADRWRV R Q L I R H 0 1 0 0 0 1 1 1 0 1 1 0 0 0 0 3 0 0 0 1 0 0 10 0 1074.5669 F8WE04;P04792 F8WE04 80 89 HSPB1 Heat shock protein beta-1 yes no 2 0.0095295 75.788 By MS/MS By MS/MS 1 1 631310000 332100000 299210000 4639 1055 5281 11681;11682 11358;11359 11359 1995 2 QLSTEQAVLQESLEK DKHMAISRQLSTEQAV VLQESLEKESKVNKRL R Q L E K E 1 0 0 0 0 3 3 0 0 0 3 1 0 0 0 2 1 0 0 1 0 0 15 0 1701.8785 Q9ULD2 Q9ULD2 1201 1215 MTUS1 Microtubule-associated tumor suppressor 1 yes yes 3 0.0016367 76.068 By MS/MS By MS/MS 1 1 5019000 2152200 2866800 4640 3038 5282 11683;11684 11360;11361 11360 6393;7909 2 QLTLNEIYSWFTRTFAYFR AIMESSDRQLTLNEIY TRTFAYFRRNAATWKN R Q L F R R 1 2 1 0 0 1 1 0 0 1 2 0 0 3 0 1 3 1 2 0 0 0 19 1 2455.2325 A8MUV4;A0A0U1RQR8;A0A0U1RQY3;A0A0U1RQM2;O15409;Q0PRL4;A0A0U1RQE0 A8MUV4 503 521 FOXP2 Forkhead box protein P2 yes no 3 0.013011 49.049 By MS/MS 1 8409600 0 8409600 4641 385 5283 11685 11362 11362 710;8041 1 QLTQPETHFGR LRSPFLQKQLTQPETH QPETHFGREPAAAISR K Q L G R E 0 1 0 0 0 2 1 1 1 0 1 0 0 1 1 0 2 0 0 0 0 0 11 0 1312.6524 H0Y5J4;Q9UJU6;B4DDD6 H0Y5J4 218 228 DBNL Drebrin-like protein yes no 2;3 2.638E-05 130.1 By MS/MS By MS/MS 2 2 35543000 18031000 17512000 4642 1129 5284 11686;11687;11688;11689 11363;11364;11365 11363 7197 3 QLVAGNSPK QVGTKTYKQLVAGNSP LVAGNSPKKQASRPPI K Q L P K K 1 0 1 0 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 9 0 912.50288 Q96EU6 Q96EU6 67 75 RRP36 Ribosomal RNA processing protein 36 homolog yes yes 2 0.0046342 95.618 By MS/MS 1 21696000 21696000 0 4643 2643 5285 11690 11366 11366 5451 1 QLVAGNSPKK QVGTKTYKQLVAGNSP VAGNSPKKQASRPPIQ K Q L K K Q 1 0 1 0 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 10 1 1040.5978 Q96EU6 Q96EU6 67 76 RRP36 Ribosomal RNA processing protein 36 homolog yes yes 2 0.01771 69.864 By MS/MS By matching 1 1 12168000 6783400 5384600 4644 2643 5286 11691;11692 11367 11367 5451 1 QLVYVEQAGSSPK PAGKEYVRQLVYVEQA EQAGSSPKLRAGPRHK R Q L P K L 1 0 0 0 0 2 1 1 0 0 1 1 0 0 1 2 0 0 1 2 0 0 13 0 1404.7249 Q9C0H5 Q9C0H5 397 409 ARHGAP39 Rho GTPase-activating protein 39 yes yes 2 0.0014426 91.307 By MS/MS By matching 1 1 9386700 4077500 5309100 4645 2795 5287 11693;11694 11368 11368 5837;5838 1 QLWDSPETAPAAR AGGHPDARQLWDSPET PETAPAARTPQSPAPC R Q L A R T 3 1 0 1 0 1 1 0 0 0 1 0 0 0 2 1 1 1 0 0 0 0 13 0 1440.6997 Q9Y613 Q9Y613 482 494 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.0015896 89.9 By matching By MS/MS 1 1 18023000 9193700 8829300 4646 3141 5288 11695;11696 11369 11369 6722 1 QLYTVTMDVHSRYR ________________ MDVHSRYRTEAHQDVV K Q L Y R T 0 2 0 1 0 1 0 0 1 0 1 0 1 0 0 1 2 0 2 2 0 0 14 1 1767.8726 A0A087WV29;Q9H0A0;E9PMU0 A0A087WV29 6 19 NAT10 N-acetyltransferase 10 yes no 3 0.0082486 60.628 By MS/MS 1 5912000 5912000 0 4647 69 5289 11697 11370 11370 26 126;7980 1 QMGYTEAIEVIQAASSPVK RELVEALRQMGYTEAI QAASSPVKTTSQAHSL R Q M V K T 3 0 0 0 0 2 2 1 0 2 0 1 1 0 1 2 1 0 1 2 0 0 19 0 2021.0139 P19838 P19838 878 896 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 2;3 0.0001168 106.58 By MS/MS By MS/MS 1 1 12933000 9266200 3667000 4648 1734 5290 11698;11699 11371;11372 11371 649 3268;3269 1 QMNMSPPPGNAGPVIMSIEEK ELQNEVEKQMNMSPPP VIMSIEEKMEADARSI K Q M E K M 1 0 2 0 0 1 2 2 0 2 0 1 3 0 4 2 0 0 0 1 0 0 21 0 2226.0483 B4DEH8;G3V4T2;Q86U42 B4DEH8 18 38 PABPN1 Polyadenylate-binding protein 2 yes no 3 0.0023168 66.308 By MS/MS By MS/MS 1 1 21038000 11775000 9263400 4649 545 5291 11700;11701 11373;11374 11373 215;216 1021 1 QMPSESLDPAFSPR LQQAVLSRQMPSESLD LDPAFSPRMPSSGFAA R Q M P R M 1 1 0 1 0 1 1 0 0 0 1 0 1 1 3 3 0 0 0 0 0 0 14 0 1560.7242 Q15018 Q15018 269 282 FAM175B BRISC complex subunit Abro1 yes yes 2 0.00092899 85.006 By MS/MS By MS/MS 2 2 36205000 20043000 16162000 4650 2116 5292;5293 11702;11703;11704;11705 11375;11376;11377 11375 842 4182 2 QMQVSLTSK CRSVRTVKQMQVSLTS MQVSLTSKKHSRKSSS K Q M S K K 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 2 1 0 0 1 0 0 9 0 1020.5274 P55085 P55085 369 377 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 yes yes 2 0.0075877 62.466 By matching By MS/MS 1 1 13140000 5967700 7171900 4651 1910 5294 11706;11707 11378 11378 743 3694 1 QMSFDLTK QMQRTITRQMSFDLTK QMSFDLTKLLVTEDWF R Q M T K L 0 0 0 1 0 1 0 0 0 0 1 1 1 1 0 1 1 0 0 0 0 0 8 0 968.46372 Q9ULH0;H0Y8E4;E9PH70 Q9ULH0 916 923 KIDINS220 Kinase D-interacting substrate of 220 kDa yes no 2 0.010207 91.937 By MS/MS By MS/MS 1 1 22683000 13968000 8714800 4652 3041 5295 11708;11709 11379;11380 11379 6401 2 QMSLLLR SKQAVAYRQMSLLLRR RQMSLLLRRPPGREAY R Q M L R R 0 1 0 0 0 1 0 0 0 0 3 0 1 0 0 1 0 0 0 0 0 0 7 0 859.49496 P25705 P25705 323 329 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.019207 64.757 By MS/MS 1 0 0 0 4653 1764 5296 11710 11381 11381 665 1 QMSVPGIFNPHEIPEEMCD ADEEKHKRQMSVPGIF EIPEEMCD________ R Q M C D - 0 0 1 1 1 1 3 1 1 2 0 0 2 1 3 1 0 0 0 1 0 0 19 0 2228.9541 O14980 O14980 1053 1071 XPO1 Exportin-1 yes yes 2 0.00015094 115.26 By MS/MS By matching 2 2 53728000 23597000 30132000 4654 1465 5297;5298 11711;11712;11713;11714 11382;11383 11382 527;528 2726 2 QNCELFEQLGEYKFQNALLVR EEPQNLIKQNCELFEQ FQNALLVRYTKKVPQV K Q N V R Y 1 1 2 0 1 3 3 1 0 0 4 1 0 2 0 0 0 0 1 1 0 0 21 1 2598.2901 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;H0YA55;D6RHD5;A0A087WWT3 B7WNR0 299 319 ALB Serum albumin yes no 3 0.00013208 119.08 By MS/MS 1 14792000 0 14792000 + 4655 314 5299 11715 11384 11384 1 QNDTPKGPQPPTVSPIR FEKAAFQKQNDTPKGP PPTVSPIRSSRPPPAK K Q N I R S 0 1 1 1 0 2 0 1 0 1 0 1 0 0 5 1 2 0 0 1 0 0 17 1 1830.9588 P46087 P46087 773 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 3 0.0016968 77.562 By MS/MS By MS/MS 1 1 26729000 11793000 14936000 4656 1836 5300 11716;11717 11385;11386 11385 3471;7447 2 QNGSNDSDRYSDNEEDSKIELK SSSAENTRQNGSNDSD EDSKIELKLEKREPLK R Q N L K L 0 1 3 4 0 1 3 1 0 1 1 2 0 0 0 4 0 0 1 0 0 0 22 2 2542.1055 G5E972;P42167;H0YJH7 G5E972 174 195 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3;4 2.3061E-35 165.66 By MS/MS By MS/MS 10 7 1417800000 851750000 566060000 4657 1097 5301;5302;5303;5304;5305 11718;11719;11720;11721;11722;11723;11724;11725;11726;11727;11728;11729;11730;11731;11732;11733;11734 11387;11388;11389;11390;11391;11392;11393;11394;11395;11396;11397;11398;11399 11396 51;52;53;154 2064;2065;2066;8144 13 QNISRTVMQRGSLGVDSVSASQGTK GLEMGLERQNISRTVM VSASQGTKPSLLPGRM R Q N T K P 1 2 1 1 0 3 0 3 0 1 1 1 1 0 0 5 2 0 0 3 0 0 25 2 2605.3242 H9KV82;Q8N7U6 H9KV82 77 101 EFHB EF-hand domain-containing family member B yes no 4 0.0042987 50.776 By MS/MS 1 6540500 0 6540500 4658 1295 5306 11735 11400 11400 2398;2399;7237;7238 1 QNLLSQSHAYQQFLR LHKMWENRQNLLSQSH HAYQQFLRDTKQAEAF R Q N L R D 1 1 1 0 0 4 0 0 1 0 3 0 0 1 0 2 0 0 1 0 0 0 15 0 1831.9329 A0A087WUZ3;Q01082 A0A087WUZ3 1162 1176 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.028618 53.3 By MS/MS 1 0 0 0 4659 67 5307 11736 11401 11401 123 1 QNLRFDVYNVDSK LDYFFEEKQNLRFDVY DVYNVDSKTNISKPKD K Q N S K T 0 1 2 2 0 1 0 0 0 0 1 1 0 1 0 1 0 0 1 2 0 0 13 1 1596.7896 Q8IYJ1;A0A087WX62 Q8IYJ1 81 93 CPNE9 Copine-9 yes no 3 0.027878 52.008 By MS/MS 1 0 0 0 4660 2443 5308 11737 11402 11402 4997 1 QNLWFANPGGSNSMPSQSR PSLGGQGRQNLWFANP NSMPSQSRSSVQRTHS R Q N S R S 1 1 3 0 0 2 0 2 0 0 1 0 1 1 2 4 0 1 0 0 0 0 19 0 2076.9436 M0QZ22;Q5PRF9;M0QX45 M0QZ22 616 634 SAMD4B Protein Smaug homolog 2 yes no 2 2.3026E-05 123.28 By MS/MS By MS/MS 1 1 19435000 10392000 9042800 4661 1411 5309 11738;11739 11403;11404 11404 492 2589;2590 2 QNNEYHILLDIKTR QIRSNMERQNNEYHIL ILLDIKTRLEQEIATY R Q N T R L 0 1 2 1 0 1 1 0 1 2 2 1 0 0 0 0 1 0 1 0 0 0 14 1 1755.9268 CON__P35900;P35900 CON__P35900 349 362 KRT20 Keratin, type I cytoskeletal 20 yes no 2 0.016406 55.806 By matching By MS/MS 1 1 10904000 4774800 6129600 + 4662 715 5310 11740;11741 11405 11405 8113 0 QNPEQSADEDAEK ESHITSYKQNPEQSAD SADEDAEKNEEDSEGS K Q N E K N 2 0 1 2 0 2 3 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 13 0 1459.6063 Q99613;B5ME19;H3BPE3 Q99613 161 173 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 1.7521E-14 156.2 By MS/MS By MS/MS 1 1 66580000 37100000 29480000 4663 583 5311 11742;11743 11406;11407;11408 11407 1066 3 QNPQSPPQDSSVTSK TTRQRRSRQNPQSPPQ QDSSVTSKRNIKKGAV R Q N S K R 0 0 1 1 0 3 0 0 0 0 0 1 0 0 3 4 1 0 0 1 0 0 15 0 1598.7536 C9JEF4;C9J172;E9PEH1;E7EP63;E7ER52;A6NDI8;E7EPS2;Q9UBN7 C9JEF4 18 32 HDAC6 Histone deacetylase 6 yes no 2 0.0036026 80.411 By MS/MS By matching 1 1 11522000 6965200 4556700 4664 465 5312 11744;11745 11409 11409 860 1 QNQFYDTQVIK ________________ FYDTQVIKQENESGYE R Q N I K Q 0 0 1 1 0 3 0 0 0 1 0 1 0 1 0 0 1 0 1 1 0 0 11 0 1382.683 A0A0A0MRA5;B7Z4B8;Q9BUJ2;M0R203;M0QZV6;M0R0K8;M0QYZ0 A0A0A0MRA5 7 17 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 2 0.0046873 99.442 By MS/MS By MS/MS 2 1 5182200 1879700 3302500 4665 204 5313 11746;11747;11748 11410;11411 11411 6882 2 QNSDPTSENPPLPTR SHRVEMPRQNSDPTSE ENPPLPTRIEKFDRSS R Q N T R I 0 1 2 1 0 1 1 0 0 0 1 0 0 0 4 2 2 0 0 0 0 0 15 0 1651.7802 Q9UKE5 Q9UKE5 638 652 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 1.0801E-33 174.4 By MS/MS By MS/MS 2 2 170340000 81843000 88496000 4666 3023 5314 11749;11750;11751;11752 11412;11413;11414;11415 11414 6371 4 QNSIENDIEEK SPETKCPKQNSIENDI IENDIEEKVSDLASRG K Q N E K V 0 0 2 1 0 1 3 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 11 0 1317.6048 E7ETD6;Q12830;F5GXF5 E7ETD6 1169 1179 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 1.5971E-09 156.08 By MS/MS By MS/MS 1 1 54929000 29349000 25580000 4667 819 5315 11753;11754 11416;11417;11418 11418 1486 3 QNSLGCIGECGVDSGFEAPR CKPLSTFRQNSLGCIG DSGFEAPRLGEQGGDF R Q N P R L 1 1 1 1 2 1 2 4 0 1 1 0 0 1 1 2 0 0 0 1 0 0 20 0 2151.9314 A1L020 A1L020 336 355 MEX3A RNA-binding protein MEX3A yes yes 2;3 1.8462E-10 137.99 By MS/MS By MS/MS 2 2 63645000 30982000 32663000 4668 441 5316 11755;11756;11757;11758 11419;11420;11421 11420 824 3 QNSQLPAQVQNGPSQEELEIQR YLGPTLPRQNSQLPAQ QEELEIQRRQLQEQQR R Q N Q R R 1 1 2 0 0 6 3 1 0 1 2 0 0 0 2 2 0 0 0 1 0 0 22 0 2492.2255 A0A0U1RRM6;Q8N8S7;A0A075B6E5;A0A0U1RQP7 A0A0U1RRM6 127 148 ENAH Protein enabled homolog yes no 3 0.0030931 59.011 By MS/MS By MS/MS 2 2 83791000 47921000 35870000 4669 400 5317 11759;11760;11761;11762 11422;11423;11424 11423 739 3 QNSQLPAQVQNGPSQEELEIQRR YLGPTLPRQNSQLPAQ EELEIQRRQLQEQQRQ R Q N R R Q 1 2 2 0 0 6 3 1 0 1 2 0 0 0 2 2 0 0 0 1 0 0 23 1 2648.3267 A0A0U1RRM6;Q8N8S7;A0A075B6E5;A0A0U1RQP7 A0A0U1RRM6 127 149 ENAH Protein enabled homolog yes no 3 0.00032355 75.524 By MS/MS By MS/MS 1 1 73817000 40149000 33668000 4670 400 5318 11763;11764 11425;11426 11426 739 2 QNSSTESSPNK ERGNSLTRQNSSTESS STESSPNKAPSAPMLE R Q N N K A 0 0 2 0 0 1 1 0 0 0 0 1 0 0 1 4 1 0 0 0 0 0 11 0 1177.5211 A0A0A0MS79;O14513 A0A0A0MS79 1315 1325 NCKAP5 Nck-associated protein 5 yes no 2 0.024924 49.536 By MS/MS 1 0 0 0 4671 240 5319 11765 11427 11427 422;423;424 1 QNSTSLTGKPGALPANLDDMK PGPCGLARQNSTSLTG PANLDDMKVAELKQEL R Q N M K V 2 0 2 2 0 1 0 2 0 0 3 2 1 0 2 2 2 0 0 0 0 0 21 1 2157.0736 W0Z7M9;E7ER32;A0A087X287;Q969V6;B0QY83;A0A087WU73 W0Z7M9 366 386 mkl1;MKL1 MKL/myocardin-like protein 1 yes no 3 0.0022676 64.5 By MS/MS By MS/MS 1 1 15389000 8425000 6964400 4672 3229 5320 11766;11767 11428;11429 11429 6832 2 QNTAWDTETSPR GWGQTPIKQNTAWDTE WDTETSPRGERKTDNG K Q N P R G 1 1 1 1 0 1 1 0 0 0 0 0 0 0 1 1 3 1 0 0 0 0 12 0 1404.627 Q8NDV7 Q8NDV7 730 741 TNRC6A Trinucleotide repeat-containing gene 6A protein yes yes 2 5.1348E-06 127.3 By MS/MS By MS/MS 1 1 15621000 8700600 6920800 4673 2511 5321 11768;11769 11430;11431 11430 5131;7736 2 QNTCMKKSTK SKVEENKKQNTCMKKS TCMKKSTKKKTLKNKS K Q N T K K 0 0 1 0 1 1 0 0 0 0 0 3 1 0 0 1 2 0 0 0 0 0 10 2 1224.5955 Q13127 Q13127 571 580 REST RE1-silencing transcription factor yes yes 2 0.031751 43.769 By matching By MS/MS 1 1 10207000 5297300 4909800 4674 2042 5322 11770;11771 11432 11432 812 0 QNVQVFEFQLTSEEMK SYNEQRIRQNVQVFEF QLTSEEMKAIDGLNRN R Q N M K A 0 0 1 0 0 3 3 0 0 0 1 1 1 2 0 1 1 0 0 2 0 0 16 0 1955.9299 B4DK69;Q04828;P52895 B4DK69 253 268 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C2 yes no 2 0.024231 54.393 By MS/MS 1 0 0 0 4675 552 5323 11772 11433 11433 1027 1 QNVTIMDHHSAAESFMKYMQNEYRSR AVLHSFQKQNVTIMDH MQNEYRSRGGCPADWI K Q N S R G 2 2 2 1 0 2 2 0 2 1 0 1 3 1 0 3 1 0 2 1 0 0 26 2 3172.4277 P35228 P35228 429 454 NOS2 Nitric oxide synthase, inducible yes yes 3 0.015422 41.482 By MS/MS 1 17352000 17352000 0 4676 1791 5324 11773 11434 11434 677 3378;8255 1 QPAQELSPTPGGTAHQALK ETRVPGMRQPAQELSP GTAHQALKANNTGGGL R Q P L K A 3 0 0 0 0 3 1 2 1 0 2 1 0 0 3 1 2 0 0 0 0 0 19 0 1929.9908 Q9UPN4;I3L2J8 Q9UPN4 375 393 CEP131 Centrosomal protein of 131 kDa yes no 3 0.021531 46.558 By MS/MS By matching 1 1 41731000 21586000 20144000 4677 3064 5325 11774;11775 11435 11435 6469 1 QPAQSQNLSPLSGFSR DNHVGTSKQPAQSQNL SPLSGFSRSRQTQDWV K Q P S R S 1 1 1 0 0 3 0 1 0 0 2 0 0 1 2 4 0 0 0 0 0 0 16 0 1715.8591 A6PVU7;Q9P2M7 A6PVU7 250 265 CGN Cingulin yes no 2 0.00025634 111.7 By matching By MS/MS 1 1 17425000 11302000 6123200 4678 488 5326 11776;11777 11436 11436 885 1 QPDISCILGTGGKSPR PTSRSLLRQPDISCIL GTGGKSPRLTQSSGFF R Q P P R L 0 1 0 1 1 1 0 3 0 2 1 1 0 0 2 2 1 0 0 0 0 0 16 1 1684.8567 G3V1T4;P57740 G3V1T4 73 88 NUP107 Nuclear pore complex protein Nup107 yes no 3 0.00048886 93.243 By MS/MS By MS/MS 1 1 41156000 25209000 15947000 4679 1066 5327 11778;11779 11437;11438;11439;11440;11441 11438 2011;7171 5 QPEDDSSQAFISTQNGSPRLNR RKIFYGEKQPEDDSSQ NGSPRLNRAEVPARPA K Q P N R A 1 2 2 2 0 3 1 1 0 1 1 0 0 1 2 4 1 0 0 0 0 0 22 1 2446.1473 Q5TCQ9 Q5TCQ9 841 862 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 yes yes 2 0.032145 50.108 By MS/MS 1 0 0 0 4680 2253 5328 11780 11442 11442 1 QPEYSPESPR LHLESPQRQPEYSPES EYSPESPRCQPKPSEE R Q P P R C 0 1 0 0 0 1 2 0 0 0 0 0 0 0 3 2 0 0 1 0 0 0 10 0 1188.5411 Q9H6F5 Q9H6F5 106 115 CCDC86 Coiled-coil domain-containing protein 86 yes yes 2 0.019557 65.234 By MS/MS By MS/MS 1 1 64526000 31642000 32884000 4681 2841 5329 11781;11782 11443;11444 11444 5977;5978 2 QPGQVIGATTPSTGSPTNK NPYVIMDKQPGQVIGA STGSPTNKISTASQVS K Q P N K I 1 0 1 0 0 2 0 3 0 1 0 1 0 0 3 2 4 0 0 1 0 0 19 0 1839.9327 Q9ULM3 Q9ULM3 505 523 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.012384 62.617 By MS/MS By MS/MS 1 1 78680000 40207000 38473000 4682 3046 5330 11783;11784 11445;11446 11445 6430;6431;7911 2 QPGVDSLSPVASLPK ASFPRNQKQPGVDSLS SPVASLPKQIFQPSVQ K Q P P K Q 1 0 0 1 0 1 0 1 0 0 2 1 0 0 3 3 0 0 0 2 0 0 15 0 1493.809 Q9UBW7;A0A087X151 Q9UBW7 298 312 ZMYM2 Zinc finger MYM-type protein 2 yes no 2 0.00059186 110.84 By MS/MS By MS/MS 1 1 47805000 23984000 23822000 4683 2994 5331 11785;11786 11447;11448 11448 6296 2 QPHYSAFGSVGEWLR SHPLLDQRQPHYSAFG GSVGEWLRAIKMGRYE R Q P L R A 1 1 0 0 0 1 1 2 1 0 1 0 0 1 1 2 0 1 1 1 0 0 15 0 1732.8322 P54760 P54760 903 917 EPHB4 Ephrin type-B receptor 4 yes yes 3 1.1359E-06 123.68 By MS/MS By MS/MS 1 1 6012300 6012300 0 4684 1904 5332 11787;11788 11449;11450 11450 8299 2 QPLEQNQTISPLSTYEESK INSKRSLKQPLEQNQT LSTYEESKVSKYAFEL K Q P S K V 0 0 1 0 0 3 3 0 0 1 2 1 0 0 2 3 2 0 1 0 0 0 19 0 2191.0645 Q9UQR1 Q9UQR1 403 421 ZNF148 Zinc finger protein 148 yes yes 2;3 2.6879E-05 124.98 By MS/MS By MS/MS 2 2 62342000 30848000 31494000 4685 3080 5333 11789;11790;11791;11792 11451;11452;11453;11454 11454 6620;6621;7940 4 QPLFVPTTSGPSTPPGLVLPHTEFQPAPK LPTQTAPKQPLFVPTT TEFQPAPKQDSSPHLT K Q P P K Q 1 0 0 0 0 2 1 2 1 0 3 1 0 2 8 2 4 0 0 2 0 0 29 0 3039.607 Q96T58 Q96T58 3455 3483 SPEN Msx2-interacting protein yes yes 3 2.1553E-05 77.19 By MS/MS By MS/MS 1 1 29772000 14128000 15645000 4686 2716 5334 11793;11794 11455;11456 11456 5635;7812;7813;7814 2 QPLLLSEDEEDTK PVGGNYGKQPLLLSED SEDEEDTKRVVRSAKD K Q P T K R 0 0 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 13 0 1515.7304 Q99613;B5ME19;H3BPE4 Q99613 34 46 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 9.4522E-11 143.93 By MS/MS By MS/MS 1 1 88376000 42834000 45543000 4687 583 5335 11795;11796 11457;11458;11459;11460;11461 11458 1067 5 QPLLLSEDEEDTKR PVGGNYGKQPLLLSED EDEEDTKRVVRSAKDK K Q P K R V 0 1 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 14 1 1671.8315 Q99613;B5ME19;H3BPE4 Q99613 34 47 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 8.9906E-11 139.21 By MS/MS By MS/MS 2 2 1327100000 640160000 686970000 4688 583 5336 11797;11798;11799;11800 11462;11463;11464;11465;11466;11467;11468;11469;11470;11471;11472 11472 1067 11 QPLMQGEQTSIR NYHTTPSRQPLMQGEQ QGEQTSIRSPQTRILL R Q P I R S 0 1 0 0 0 3 1 1 0 1 1 0 1 0 1 1 1 0 0 0 0 0 12 0 1386.6925 Q8N239 Q8N239 265 276 KLHL34 Kelch-like protein 34 yes yes 2 0.032154 50.034 By MS/MS By matching 1 1 7639200 3621200 4018100 4689 2462 5337 11801;11802 11473 11473 997 0 QPLSEASNQQPLSGGEEK MTHAKRARQPLSEASN PLSGGEEKSCTKPSPS R Q P E K S 1 0 1 0 0 3 3 2 0 0 2 1 0 0 2 3 0 0 0 0 0 0 18 0 1897.9017 Q9NQW6;C9JJT6 Q9NQW6 42 59 ANLN Actin-binding protein anillin yes no 2 0.00015494 121.51 By MS/MS By MS/MS 1 1 23091000 11155000 11936000 4690 2900 5338 11803;11804 11474;11475 11475 6110 2 QPLTATTLSDVLSR FQIFRALKQPLTATTL TLSDVLSRLVETVGDP K Q P S R L 1 1 0 1 0 1 0 0 0 0 3 0 0 0 1 2 3 0 0 1 0 0 14 0 1500.8148 H0Y9X0;O94915 H0Y9X0 708 721 FRYL Protein furry homolog-like yes no 3 0.031511 47.09 By MS/MS 1 0 0 0 4691 1154 5339 11805 11476 11476 1 QPPGVPNGPSSPTNESAPELPQR APPPPPYRQPPGVPNG SAPELPQRHNSLHRKT R Q P Q R H 1 1 2 0 0 2 2 2 0 0 1 0 0 0 7 3 1 0 0 1 0 0 23 0 2355.1455 Q8TF74 Q8TF74 257 279 WIPF2 WAS/WASL-interacting protein family member 2 yes yes 2;3 0.00060757 72.568 By MS/MS By MS/MS 3 3 62742000 29663000 33079000 4692 2549 5340;5341 11806;11807;11808;11809;11810;11811 11477;11478;11479;11480;11481;11482 11477 118 5207;5208 6 QPPSTFVPQINRNIRFATYTK PGLDQRAKQPPSTFVP IRFATYTKENGRTLVV K Q P T K E 1 2 2 0 0 2 0 0 0 2 0 1 0 2 3 1 3 0 1 1 0 0 21 2 2477.3179 Q7LBC6 Q7LBC6 341 361 KDM3B Lysine-specific demethylase 3B yes yes 3 0.0082519 51.166 By MS/MS By matching 1 1 98375000 55217000 43158000 4693 2369 5342 11812;11813 11483 11483 4802;7680;7681;7682;8379 1 QPSDASETTGLVQR RKSPSHHRQPSDASET ETTGLVQRCVIIQKDQ R Q P Q R C 1 1 0 1 0 2 1 1 0 0 1 0 0 0 1 2 2 0 0 1 0 0 14 0 1487.7216 O15085 O15085 33 46 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 2 0.0079266 75.739 By MS/MS By MS/MS 1 1 12570000 7063400 5506900 4694 1472 5343 11814;11815 11484;11485 11484 2747 2 QPSEEEIIK KKYKDIIRQPSEEEII PSEEEIIKLAPPPKKA R Q P I K L 0 0 0 0 0 1 3 0 0 2 0 1 0 0 1 1 0 0 0 0 0 0 9 0 1071.5448 B1AKZ5;Q15121 B1AKZ5 92 100 PEA15 Astrocytic phosphoprotein PEA-15 yes no 2 0.0042183 104.06 By MS/MS By MS/MS 1 1 68431000 31861000 36570000 4695 526 5344 11816;11817 11486;11487;11488;11489;11490 11489 987 5 QPSFSAKKMTEK TNGPRKQKQPSFSAKK SAKKMTEKTVKTKSSV K Q P E K T 1 0 0 0 0 1 1 0 0 0 0 3 1 1 1 2 1 0 0 0 0 0 12 2 1380.7071 Q9NZH5;O95997;E5RJR4;Q9NZH4 Q9NZH5 85 96 PTTG2;PTTG1;PTTG3P Securin-2;Securin;Putative pituitary tumor-transforming gene 3 protein no no 2 0.0077648 58.04 By matching By MS/MS 1 1 16904000 7617800 9285700 4696 1613;2958 5345 11818;11819 11491 11491 579 3057;3058 1 QPSPSHDGSLSPLQDR LHRQPGLRQPSPSHDG SLSPLQDRARTAHP__ R Q P D R A 0 1 0 2 0 2 0 1 1 0 2 0 0 0 3 4 0 0 0 0 0 0 16 0 1719.8176 A0A0B4J2A3;Q96A00 A0A0B4J2A3 56 71 PPP1R14A Protein phosphatase 1 regulatory subunit 14A yes no 2 0.0077383 73.219 By MS/MS 1 9187200 9187200 0 4697 291 5346 11820 11492 11492 516;517 1 QPSPSPR Q P P R 0 1 0 0 0 1 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 7 0 767.3926 REV__Q6ZSR3 yes yes 2 0.026243 85.359 By MS/MS 1 8679100 0 8679100 + 4698 3215 5347 11821 11493 11493 6811 1 QPTPPFFGR GGFDGQARQPTPPFFG PTPPFFGRDRSPLRRS R Q P G R D 0 1 0 0 0 1 0 1 0 0 0 0 0 2 3 0 1 0 0 0 0 0 9 0 1045.5345 Q96PK6 Q96PK6 204 212 RBM14 RNA-binding protein 14 yes yes 2 0.0012611 140.17 By MS/MS By MS/MS 2 1 418750000 232840000 185910000 4699 2696 5348;5349 11822;11823;11824 11494;11495;11496;11497;11498;11499;11500;11501;11502;11503;11504;11505;11506;11507 11497 7804 14 QPTPPSEAAASK VEPVPVTKQPTPPSEA PSEAAASKKKPGQKKS K Q P S K K 3 0 0 0 0 1 1 0 0 0 0 1 0 0 3 2 1 0 0 0 0 0 12 0 1182.5881 Q86UP2 Q86UP2 151 162 KTN1 Kinectin yes yes 2 0.024536 54.486 By MS/MS 1 13739000 0 13739000 4700 2402 5350 11825 11508 11508 7695 0 QPVSEPPADQVASDMPHSPTLR VEKYFVERQPVSEPPA MPHSPTLRVDRKRKVS R Q P L R V 2 1 0 2 0 2 1 0 1 0 1 0 1 0 5 3 1 0 0 2 0 0 22 0 2358.1274 Q6W2J9;H7BYY2;H7C2V9 Q6W2J9 1110 1131 BCOR BCL-6 corepressor yes no 3 0.0031479 59.154 By MS/MS By MS/MS 2 2 135420000 74550000 60865000 4701 2343 5351;5352 11826;11827;11828;11829 11509;11510;11511;11512 11511 942 4743 4 QQAAYYAQTSPQGMPQHPPAPQGQ AAWAEYYRQQAAYYAQ HPPAPQGQ________ R Q Q G Q - 4 0 0 0 0 7 0 2 1 0 0 0 1 0 5 1 1 0 2 0 0 0 24 0 2580.1816 Q96AE4 Q96AE4 621 644 FUBP1 Far upstream element-binding protein 1 yes yes 2;3 1.8061E-06 115.63 By MS/MS By MS/MS 4 4 506460000 206000000 300460000 4702 2620 5353;5354 11830;11831;11832;11833;11834;11835;11836;11837 11513;11514;11515;11516;11517 11514 1052 5390;7774 5 QQDLHLESPQRQPEYSPESPR PGAASPQRQQDLHLES EYSPESPRCQPKPSEE R Q Q P R C 0 2 0 1 0 4 3 0 1 0 2 0 0 0 4 3 0 0 1 0 0 0 21 1 2520.1993 Q9H6F5 Q9H6F5 95 115 CCDC86 Coiled-coil domain-containing protein 86 yes yes 3 0.0039968 59.342 By MS/MS By MS/MS 2 1 120520000 68042000 52476000 4703 2841 5355;5356 11838;11839;11840 11518;11519;11520;11521 11521 5977;5978;5979 4 QQDSQPEEVMDVLEMVENVK TEVRESEKQQDSQPEE LEMVENVKHVIADQEV K Q Q V K H 0 0 1 2 0 3 4 0 0 0 1 1 2 0 1 1 0 0 0 4 0 0 20 0 2346.0719 Q9H307 Q9H307 378 397 PNN Pinin yes yes 2;3 2.6589E-24 160.76 By MS/MS By MS/MS 2 2 34270000 15682000 18588000 4704 2826 5357 11841;11842;11843;11844 11522;11523;11524 11523 1124;1125 5925 3 QQEELPIYSSDFEDVPNK VKAKIPSRQQEELPIY DFEDVPNKSWQQTTFQ R Q Q N K S 0 0 1 2 0 2 3 0 0 1 1 1 0 1 2 2 0 0 1 1 0 0 18 0 2136.9851 H7C3H4;Q9BYW2;H7BZ93;C9JG86;H7BXT4 H7C3H4 832 849 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.027427 73.273 By MS/MS By matching 1 1 22139000 11029000 11110000 4705 1284 5358 11845;11846 11525 11525 2375 0 QQFYHSVQDLSGGSR CVDMSTNRQQFYHSVQ QDLSGGSRQHEAPSNR R Q Q S R Q 0 1 0 1 0 3 0 2 1 0 1 0 0 1 0 3 0 0 1 1 0 0 15 0 1707.7965 P10398 P10398 152 166 ARAF Serine/threonine-protein kinase A-Raf yes yes 2;3 0.0096561 74.76 By MS/MS By MS/MS 1 2 19311000 7125000 12186000 4706 1673 5359 11847;11848;11849 11526;11527 11526 3160;8225 2 QQGEPPSCAEGQSCASER GKEMHGTRQQGEPPSC GQSCASERQQALSRLY R Q Q E R Q 2 1 0 0 2 3 3 2 0 0 0 0 0 0 2 3 0 0 0 0 0 0 18 0 1976.7953 P01266 P01266 351 368 TG Thyroglobulin yes yes 2 0.026658 61.87 By MS/MS 1 0 0 0 4707 1627 5360 11850 11528 11528 3069;3070;3071 1 QQIQSIQQSIER IKEGSQLKQQIQSIQQ SIQQSIERLLV_____ K Q Q E R L 0 1 0 0 0 5 1 0 0 3 0 0 0 0 0 2 0 0 0 0 0 0 12 0 1456.7634 B1AHD1;P55769 B1AHD1 118 129 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 2 0.0026638 94.309 By MS/MS By MS/MS 1 1 6127000 3024200 3102900 4708 519 5361 11851;11852 11529;11530 11530 2 QQLDSFDEFIQMSVQR FDEKGLVRQQLDSFDE FIQMSVQRIVEDAPPI R Q Q Q R I 0 1 0 2 0 4 1 0 0 1 1 0 1 2 0 2 0 0 0 1 0 0 16 0 1969.9204 C9J2Y9;P30876;C9JMN3;C9JZW8 C9J2Y9 35 50 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 3 0.0303 50.806 By MS/MS 1 0 0 0 4709 630 5362 11853 11531 11531 247 1 QQLEQQQRENEEHKR ERSEALRRQQLEQQQR RENEEHKRQLLAERQK R Q Q K R Q 0 2 1 0 0 5 4 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 15 2 1978.9569 Q9UKE5 Q9UKE5 371 385 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.031159 45.764 By MS/MS 1 0 0 0 4710 3023 5363 11854 11532 11532 1 QQLPQTPPSCLK KGRQQQQKQQLPQTPP QTPPSCLKTEIMSPLY K Q Q L K T 0 0 0 0 1 3 0 0 0 0 2 1 0 0 3 1 1 0 0 0 0 0 12 0 1395.718 Q8IY81 Q8IY81 568 579 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.0013116 110.15 By MS/MS By MS/MS 1 1 153700000 89362000 64334000 4711 2438 5364 11855;11856 11533;11534 11534 7711 2 QQLSAEELDAQLDAYNAR RGAGRNSKQQLSAEEL QLDAYNARMDTS____ K Q Q A R M 4 1 1 2 0 3 2 0 0 0 3 0 0 0 0 1 0 0 1 0 0 0 18 0 2033.9654 E9PB61;Q86V81 E9PB61 243 260 ALYREF THO complex subunit 4 yes no 2 4.4742E-10 139.08 By MS/MS By MS/MS 1 1 28455000 13663000 14792000 4712 843 5365 11857;11858 11535;11536 11536 1572 2 QQLSEEEK PQLSDDERQQLSEEEK QQLSEEEKANSDDERP R Q Q E K A 0 0 0 0 0 2 3 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 0 989.46655 Q8WVC0 Q8WVC0 202 209 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 0.029529 63.184 By MS/MS 1 25735000 0 25735000 4713 2559 5366 11859 11537 11537 1 QQLSPSPGQEAGILPETEK EQQDPLEKQQLSPSPG GILPETEKAKSEENQG K Q Q E K A 1 0 0 0 0 3 3 2 0 1 2 1 0 0 3 2 1 0 0 0 0 0 19 0 2008.0113 E5RJM0;B7ZLQ8;Q17RY0 E5RJM0 94 112 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 yes no 2 0.00074248 101.28 By matching By MS/MS 1 1 9648100 5401700 4246300 4714 600 5367 11860;11861 11538 11538 1091 0 QQMEERFVASNPSKVSYEPITTTLR SGELDILRQQMEERFV EPITTTLRRKQEEVSA R Q Q L R R 1 2 1 0 0 2 3 0 0 1 1 1 1 1 2 3 3 0 1 2 0 0 25 2 2910.4546 Q9UQD0 Q9UQD0 1867 1891 SCN8A Sodium channel protein type 8 subunit alpha yes yes 3 0.022221 47.808 By MS/MS 1 4171300 0 4171300 4715 3077 5368 11862 11539 11539 6614 1 QQPPEPEWIGDGESTSPSDK ________________ ESTSPSDKVVKKGKKD K Q Q D K V 0 0 0 2 0 2 3 2 0 1 0 1 0 0 4 3 1 1 0 0 0 0 20 0 2182.9655 Q5STZ8;Q8NE71;A0A0G2JIC2 Q5STZ8 7 26 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 3.4478E-05 119.18 By MS/MS By MS/MS 2 2 177610000 92549000 85057000 4716 2232 5369 11863;11864;11865;11866 11540;11541;11542;11543;11544;11545 11542 4468;4469;7640 6 QQPPEPEWIGDGESTSPSDKVVK ________________ SPSDKVVKKGKKDKKI K Q Q V K K 0 0 0 2 0 2 3 2 0 1 0 2 0 0 4 3 1 1 0 2 0 0 23 1 2509.1973 Q5STZ8;Q8NE71;A0A0G2JIC2 Q5STZ8 7 29 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 3.0906E-05 112.26 By MS/MS By MS/MS 1 1 82682000 40272000 42410000 4717 2232 5370 11867;11868 11546;11547 11547 4468;4469;7640 2 QQPPLGPSSSLLSLPGLK AIHEERRRQQPPLGPS LLSLPGLKSRGSRAAG R Q Q L K S 0 0 0 0 0 2 0 2 0 0 5 1 0 0 4 4 0 0 0 0 0 0 18 0 1818.0251 Q4KMP7 Q4KMP7 649 666 TBC1D10B TBC1 domain family member 10B yes yes 2 1.4669E-23 161.2 By MS/MS By MS/MS 1 1 62818000 37124000 25693000 4718 2195 5371 11869;11870 11548;11549 11549 4380 2 QQPQPSQTESPQEAQIIQAK RSSRLQAKQQPQPSQT EAQIIQAKKRKTTQFT K Q Q A K K 2 0 0 0 0 7 2 0 0 2 0 1 0 0 3 2 1 0 0 0 0 0 20 0 2235.1131 E5RHN2;E5RK20;Q8WUE3;O96020 E5RHN2 12 31 CCNE2 G1/S-specific cyclin-E2 yes no 3 0.00012987 91.565 By MS/MS By MS/MS 1 1 19933000 11303000 8630100 4719 781 5372 11871;11872 11550;11551 11550 1398;1399;7062 2 QQPTQFINPETPGYVGFANLPNQVHR ________________ NLPNQVHRKSVKKGFE K Q Q H R K 1 1 3 0 0 4 1 2 1 1 1 0 0 2 4 0 2 0 1 2 0 0 26 0 2951.4678 Q15019;C9JT15;C9JSE7;A0A1B0GXJ2;C9JFT1;F8WB65;C9JZI2;C9IZU3;C9J938;C9JB25 Q15019 4 29 SEPT2 Septin-2 yes no 3 1.4973E-07 118.36 By MS/MS By matching 1 1 23886000 12706000 11180000 4720 2117 5373 11873;11874 11552;11553 11553 8343 2 QQQDEAYLASLR RNQTQVLRQQQDEAYL EAYLASLRADQEKERK R Q Q L R A 2 1 0 1 0 3 1 0 0 0 2 0 0 0 0 1 0 0 1 0 0 0 12 0 1420.6947 Q96CS3 Q96CS3 291 302 FAF2 FAS-associated factor 2 yes yes 2 0.0078363 78.488 By matching By MS/MS 1 1 16490000 8345600 8144600 4721 2631 5374 11875;11876 11554 11554 8419 0 QQQEPTGEPSPK RGRGRPRKQQQEPTGE PTGEPSPKRPRGRPKG K Q Q P K R 0 0 0 0 0 3 2 1 0 0 0 1 0 0 3 1 1 0 0 0 0 0 12 0 1324.6259 F5H2U8;F5H2A4;F5H6H0;P52926 F5H2U8 35 46 HMGA2 High mobility group protein HMGI-C yes no 2 0.00045252 112.08 By MS/MS By MS/MS 1 1 13814000 6867700 6946800 4722 966 5375 11877;11878 11555;11556;11557 11555 1819 3 QQQVSVDLSFK AGLRRLQRQQQVSVDL VSVDLSFKTKAFTTIL R Q Q F K T 0 0 0 1 0 3 0 0 0 0 1 1 0 1 0 2 0 0 0 2 0 0 11 0 1277.6616 Q9Y5Y3 Q9Y5Y3 252 262 GPR45 Probable G-protein coupled receptor 45 yes yes 2 0.02789 46.39 By MS/MS 1 0 0 0 4723 3139 5376 11879 11558 11558 6719 1 QQSEEDLLLQDFSR MAPKGSSKQQSEEDLL LLLQDFSRNLSAKSSA K Q Q S R N 0 1 0 2 0 3 2 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 14 0 1706.8111 C9JA28;Q9UNL2 C9JA28 9 22 SSR3 Translocon-associated protein subunit gamma yes no 2 8.9542E-07 126.76 By matching By MS/MS 1 1 26881000 6584600 20296000 4724 650 5377 11880;11881 11559 11559 1208 1 QQSHFAMMHGGTGFAGIDSSSPEVK AKLNQVARQQSHFAMM DSSSPEVKGYWASLDA R Q Q V K G 2 0 0 1 0 2 1 4 2 1 0 1 2 2 1 4 1 0 0 1 0 0 25 0 2605.169 Q15365 Q15365 244 268 PCBP1 Poly(rC)-binding protein 1 yes yes 3 0.027574 41.703 By MS/MS 1 24634000 0 24634000 4725 2133 5378 11882 11560 11560 853;854 4222;4223;4224 1 QQSTTLSTLYPSTSSLLTNHQHEGR ELSLKEQRQQSTTLST TNHQHEGRKVRAIYDF R Q Q G R K 0 1 1 0 0 3 1 1 2 0 4 0 0 0 1 5 5 0 1 0 0 0 25 0 2785.3631 A6NMU3;Q92783 A6NMU3 78 102 STAM Signal transducing adapter molecule 1 yes no 3 0.00074253 67.136 By MS/MS By matching 1 1 11581000 5949800 5630700 4726 481 5379 11883;11884 11561 11561 8052 1 QQSVESLAEEVK THDGILARQQSVESLA ESLAEEVKDKVPSLTT R Q Q V K D 1 0 0 0 0 2 3 0 0 0 1 1 0 0 0 2 0 0 0 2 0 0 12 0 1345.6725 Q8WXH0;G3V5X4;A0A0A0MRE3 Q8WXH0 2779 2790 SYNE2 Nesprin-2 yes no 2 0.028944 60.364 By MS/MS By matching 1 1 10262000 4276600 5984900 4727 2570 5380 11885;11886 11562 11562 1 QQTEKPESEDEWER KKKTGGSKQQTEKPES ESEDEWERTERERLQD K Q Q E R T 0 1 0 1 0 2 5 0 0 0 0 1 0 0 1 1 1 1 0 0 0 0 14 1 1789.7755 A2AB15;A0A140T947;O60231 A2AB15 93 106 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 2;3 2.6785E-20 156.72 By MS/MS By MS/MS 2 2 145340000 79155000 66184000 4728 405 5381 11887;11888;11889;11890 11563;11564;11565;11566 11563 749 4 QQTQQVQSPVDSATMSPVER PKVRAIQRQQTQQVQS ATMSPVERTAAWVLNN R Q Q E R T 1 1 0 1 0 5 1 0 0 0 0 0 1 0 2 3 2 0 0 3 0 0 20 0 2215.0539 H0Y638;Q9UJF2 H0Y638 490 509 RASAL2 Ras GTPase-activating protein nGAP yes no 2;3 0.00053443 77.894 By matching By MS/MS 2 2 21900000 10114000 11786000 4729 1133 5382 11891;11892;11893;11894 11567;11568 11567 412 2156 1 QQTQSALEQR GPFKALLRQQTQSALE TQSALEQREFPFFTLT R Q Q Q R E 1 1 0 0 0 4 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1187.5895 Q86YS7;H0YFE9 Q86YS7 337 346 C2CD5 C2 domain-containing protein 5 yes no 2 1.053E-06 103.43 By MS/MS By MS/MS 1 1 12713000 5722400 6990700 4730 2422 5383 11895;11896 11569;11570 11569 7707 0 QQVPSGESAILDR KELLIFNKQQVPSGES GESAILDRVADGMVFG K Q Q D R V 1 1 0 1 0 2 1 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 13 0 1398.7103 P09874 P09874 270 282 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.026191 71.085 By MS/MS By matching 1 1 31057000 17163000 13894000 4731 1665 5384 11897;11898 11571 11571 1 QRASLSSAPVVLVGDHA QSKLAQRRQRASLSSA VVLVGDHA________ R Q R H A - 3 1 0 1 0 1 0 1 1 0 2 0 0 0 1 3 0 0 0 3 0 0 17 1 1705.9111 Q9HBH9 Q9HBH9 449 465 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 yes yes 3 0.0034199 68.189 By MS/MS By MS/MS 1 1 9125200 4333000 4792200 4732 2868 5385 11899;11900 11572;11573 11573 6036;6037;6038 2 QRELYSQQHRQR NAQMLAQRQRELYSQQ YSQQHRQRQLIQQQRA R Q R Q R Q 0 3 0 0 0 4 1 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 12 2 1627.8291 B5MCN7;Q15788 B5MCN7 962 973 NCOA1 Nuclear receptor coactivator 1 yes no 2 0.014103 71.268 By MS/MS By matching 1 1 17524000 7791300 9732900 4733 576 5386 11901;11902 11574 11574 1057;8078 0 QREQTEILESSRMR EKVSSVDKQREQTEIL ILESSRMRAQDIIGHH K Q R M R A 0 3 0 0 0 2 3 0 0 1 1 0 1 0 0 2 1 0 0 0 0 0 14 2 1761.8792 Q5T200 Q5T200 920 933 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 0.026418 52.254 By MS/MS 1 0 0 0 4734 2238 5387 11903 11575 11575 894 4478;4479 1 QRPSYDIFEDSDDSEPGGPPAPR KSARRCVKQRPSYDIF PGGPPAPRRRTPRENE K Q R P R R 1 2 0 4 0 1 2 2 0 1 0 0 0 1 5 3 0 0 1 0 0 0 23 1 2531.1201 Q9UMN6 Q9UMN6 1082 1104 KMT2B Histone-lysine N-methyltransferase 2B yes yes 3 2.3596E-05 92.913 By MS/MS By matching 1 1 25463000 13968000 11495000 4735 3054 5388 11904;11905 11576;11577 11577 6443;6444 2 QRQPPGTQQSHSSPGEITSSPQGLDNPALLR VPGTSSPRQRQPPGTQ LDNPALLRDMLLANPH R Q R L R D 1 2 1 1 0 5 1 3 1 1 3 0 0 0 5 5 2 0 0 0 0 0 31 1 3282.6341 Q5TDH0 Q5TDH0 109 139 DDI2 Protein DDI1 homolog 2 yes yes 3 0.026773 40.121 By matching By MS/MS 1 1 17840000 8791400 9048100 4736 2256 5389 11906;11907 11578 11578 4512 1 QRRFSDQAGPAIPTSNSYSK RSVSANPKQRRFSDQA PTSNSYSKKTQSNNAE K Q R S K K 2 2 1 1 0 2 0 1 0 1 0 1 0 1 2 4 1 0 1 0 0 0 20 2 2209.0876 E7ETY4;E9PC69 E7ETY4 372 391 MARK2 yes no 3 0.024366 52.644 By matching By MS/MS 1 1 17116000 6172400 10943000 4737 823 5390 11908;11909 11579 11579 1 QRSPIALPVK RPSSFRDRQRSPIALP SPIALPVKQEPPQIDA R Q R V K Q 1 1 0 0 0 1 0 0 0 1 1 1 0 0 2 1 0 0 0 1 0 0 10 1 1107.6764 Q8TF01 Q8TF01 209 218 PNISR Arginine/serine-rich protein PNISR yes yes 2;3 0.0001916 130.69 By MS/MS By MS/MS 2 2 53277000 33300000 19977000 4738 2548 5391 11910;11911;11912;11913 11580;11581;11582;11583 11580 5205 4 QRSPIALPVKQEPPQIDAVK RPSSFRDRQRSPIALP PPQIDAVKRRTLPAWI R Q R V K R 2 1 0 1 0 3 1 0 0 2 1 2 0 0 4 1 0 0 0 2 0 0 20 2 2213.2532 Q8TF01 Q8TF01 209 228 PNISR Arginine/serine-rich protein PNISR yes yes 3 0.0017569 78.401 By MS/MS By MS/MS 1 1 56700000 26244000 30456000 4739 2548 5392 11914;11915 11584;11585 11585 5205 2 QRSPSPAPAPAPAAAAGPPTR TQRRERYRQRSPSPAP AAAGPPTRKKSRRERK R Q R T R K 7 2 0 0 0 1 0 1 0 0 0 0 0 0 7 2 1 0 0 0 0 0 21 1 1967.0337 Q9H7N4 Q9H7N4 496 516 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 3;4 0.00032043 77.401 By MS/MS By MS/MS 2 2 328110000 179300000 148810000 4740 2849 5393 11916;11917;11918;11919 11586;11587;11588;11589 11587 5999;6000 4 QRYDENEDLSDVEEIVSVR ATQRPIDRQRYDENED VEEIVSVRGFSLEEKL R Q R V R G 0 2 1 3 0 1 4 0 0 1 1 0 0 0 0 2 0 0 1 3 0 0 19 1 2294.0662 Q8NHM5;S4R3G4;F8WBN2;F6SRV7;F5H0A1 Q8NHM5 48 66 KDM2B Lysine-specific demethylase 2B yes no 3 0.00053943 81.723 By MS/MS By MS/MS 1 1 11370000 6774200 4595700 4741 2525 5394 11920;11921 11590;11591;11592 11592 5155 3 QSATNLESEEDSEAPVDSTLNNNR QSSGPFKKQSATNLES DSTLNNNRNQEFVSSS K Q S N R N 2 1 4 2 0 1 4 0 0 0 2 0 0 0 1 4 2 0 0 1 0 0 24 0 2619.1532 Q2KHR3 Q2KHR3 980 1003 QSER1 Glutamine and serine-rich protein 1 yes yes 2 1.4798E-05 89.866 By MS/MS By MS/MS 1 1 15678000 7172800 8505500 4742 2176 5395 11922;11923 11593;11594 11593 4326 2 QSELSAEESPEKLGTSQLHR IVSEYAEKQSELSAEE LGTSQLHRRKVISLNK K Q S H R R 1 1 0 0 0 2 4 1 1 0 3 1 0 0 1 4 1 0 0 0 0 0 20 1 2225.0924 F8W9X7;Q567U6 F8W9X7 296 315 CCDC93 Coiled-coil domain-containing protein 93 yes no 3 0.00032921 84.829 By MS/MS By MS/MS 1 1 14448000 8262500 6186000 4743 1042 5396 11924;11925 11595;11596 11596 1969 2 QSETVDQNSDSDEMLAILK PNKLPKSKQSETVDQN DEMLAILKEVSRMSHS K Q S L K E 1 0 1 3 0 2 2 0 0 1 2 1 1 0 0 3 1 0 0 1 0 0 19 0 2121.9736 P46100;A0A096LNL9;A0A096LNW1 P46100 721 739 ATRX Transcriptional regulator ATRX yes no 2 0.0026223 66.264 By MS/MS By matching 1 1 12133000 5749500 6383600 4744 1837 5397 11926;11927 11597 11597 702 3481 1 QSFDDNDSEELEDK KKGQKGKKQSFDDNDS DSEELEDKDSKSKKTA K Q S D K D 0 0 1 4 0 1 3 0 0 0 1 1 0 1 0 2 0 0 0 0 0 0 14 0 1669.6591 A0A087WUT6;O60841 A0A087WUT6 106 119 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0011497 102.72 By MS/MS By MS/MS 1 1 22658000 12168000 10490000 4745 60 5398 11928;11929 11598;11599;11600 11598 104;105 3 QSFDDNDSEELEDKDSK KKGQKGKKQSFDDNDS ELEDKDSKSKKTAKPK K Q S S K S 0 0 1 5 0 1 3 0 0 0 1 2 0 1 0 3 0 0 0 0 0 0 17 1 1999.8131 A0A087WUT6;O60841 A0A087WUT6 106 122 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 1.1442E-124 237.34 By MS/MS By MS/MS 2 2 298580000 175920000 122650000 4746 60 5399 11930;11931;11932;11933 11601;11602;11603;11604 11601 104;105 4 QSGLSSLVNGKSPIR ADMNESCKQSGLSSLV VNGKSPIRSLMHRSAR K Q S I R S 0 1 1 0 0 1 0 2 0 1 2 1 0 0 1 4 0 0 0 1 0 0 15 1 1541.8526 H0Y612;Q9UPN9 H0Y612 612 626 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 2;3 5.2035E-42 186.17 By MS/MS By MS/MS 5 6 115310000 57719000 57588000 4747 1131 5400;5401 11934;11935;11936;11937;11938;11939;11940;11941;11942;11943;11944 11605;11606;11607;11608;11609;11610;11611;11612;11613;11614 11609 54 2151;2152;2153 10 QSGSPTLDTAPNGR FGKNIYRKQSGSPTLD LDTAPNGRYGIGYLMA K Q S G R Y 1 1 1 1 0 1 0 2 0 0 1 0 0 0 2 2 2 0 0 0 0 0 14 0 1399.6692 Q9H2J7 Q9H2J7 698 711 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.0011125 105.58 By MS/MS By MS/MS 2 2 54414000 30713000 23701000 4748 2819 5402;5403 11945;11946;11947;11948 11615;11616;11617;11618 11615 133 5905;5906;7849 3 QSHAASAAPQASSPPDYTMAWAEYYR AWEDYYKKQSHAASAA MAWAEYYRQQVAFYGQ K Q S Y R Q 7 1 0 1 0 2 1 0 1 0 0 0 1 0 3 4 1 1 3 0 0 0 26 0 2855.2609 Q96I24 Q96I24 527 552 FUBP3 Far upstream element-binding protein 3 yes yes 3 0.0067057 50.189 By MS/MS By MS/MS 1 2 28112000 11128000 16984000 4749 2666 5404 11949;11950;11951 11619;11620 11620 1061 5495;5496 2 QSHSESPSLQSK DTSSPEVRQSHSESPS ESPSLQSKSQTSPKGG R Q S S K S 0 0 0 0 0 2 1 0 1 0 1 1 0 0 1 5 0 0 0 0 0 0 12 0 1313.6212 Q9UQ35 Q9UQ35 1078 1089 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 2.9701E-26 178.68 By MS/MS By MS/MS 3 3 104800000 63741000 41060000 4750 3074 5405 11952;11953;11954;11955;11956;11957 11621;11622;11623;11624;11625;11626 11625 6542;6543;6544 6 QSHSGSISPYPK VKPETPPRQSHSGSIS GSISPYPKVKAQTPPG R Q S P K V 0 0 0 0 0 1 0 1 1 1 0 1 0 0 2 4 0 0 1 0 0 0 12 0 1286.6255 Q9UQ35;I3L4D8 Q9UQ35 987 998 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.00028759 95.236 By MS/MS 1 16012000 16012000 0 4751 3074 5406 11958 11627 11627 6545;6546;6547;6548 1 QSISFPEGLR ALTADLPKQSISFPEG ISFPEGLRTPASPSSA K Q S L R T 0 1 0 0 0 1 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1132.5877 H7C3M7;O94887 H7C3M7 73 82 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 yes no 2 0.00036981 126.76 By MS/MS By MS/MS 1 1 25629000 12781000 12848000 4752 1285 5407 11959;11960 11628;11629;11630;11631 11630 2378 4 QSIWTNFSSR MALGNGLRQSIWTNFS IWTNFSSRFHIPQVAE R Q S S R F 0 1 1 0 0 1 0 0 0 1 0 0 0 1 0 3 1 1 0 0 0 0 10 0 1224.5887 Q6P1M0 Q6P1M0 365 374 SLC27A4 Long-chain fatty acid transport protein 4 yes yes 2 0.016896 50.354 By MS/MS By matching 1 1 186410000 92109000 94306000 4753 2316 5408 11961;11962 11632 11632 4672;4673 1 QSLPASPR RERSLKKRQSLPASPR QSLPASPRARLSASTA R Q S P R A 1 1 0 0 0 1 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 8 0 854.46102 Q3KQU3;H0YF21 Q3KQU3 441 448 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.024734 68.626 By matching By MS/MS 1 1 21147000 11683000 9463200 4754 2187 5409 11963;11964 11633;11634 11634 4357 2 QSMDMSPIK PFLRGHTKQSMDMSPI SMDMSPIKIVKNPDGS K Q S I K I 0 0 0 1 0 1 0 0 0 1 0 1 2 0 1 2 0 0 0 0 0 0 9 0 1035.4729 F5H658;Q14562 F5H658 455 463 DHX8 ATP-dependent RNA helicase DHX8 yes no 2 0.0026936 110.64 By MS/MS By MS/MS 3 3 50730000 28246000 22485000 4755 980 5410;5411 11965;11966;11967;11968;11969;11970 11635;11636;11637;11638;11639;11640 11639 359;360 1835 6 QSNASSDVEVEEK SSQQAATKQSNASSDV SDVEVEEKETSVSKED K Q S E K E 1 0 1 1 0 1 3 0 0 0 0 1 0 0 0 3 0 0 0 2 0 0 13 0 1420.6318 O75475 O75475 101 113 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 2.9157E-26 173.33 By MS/MS By MS/MS 4 4 405110000 237250000 167860000 4756 1547 5412;5413;5414 11971;11972;11973;11974;11975;11976;11977;11978 11641;11642;11643;11644;11645;11646;11647;11648;11649 11645 2922;2923 8 QSNVAAPGDATPPAEK LKPIPLKRQSNVAAPG DATPPAEKKYKPLNTT R Q S E K K 4 0 1 1 0 1 1 1 0 0 0 1 0 0 3 1 1 0 0 1 0 0 16 0 1551.7529 Q96QC0 Q96QC0 246 261 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 2 0.00055731 112.5 By matching By MS/MS 1 1 29811000 16868000 12943000 4757 2701 5415 11979;11980 11650 11650 7805 1 QSNVAAPGDATPPAEKK LKPIPLKRQSNVAAPG ATPPAEKKYKPLNTTP R Q S K K Y 4 0 1 1 0 1 1 1 0 0 0 2 0 0 3 1 1 0 0 1 0 0 17 1 1679.8479 Q96QC0 Q96QC0 246 262 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 2 0.013182 78.705 By matching By MS/MS 1 1 8730100 5785200 2944900 4758 2701 5416 11981;11982 11651 11651 7805 1 QSPASPPPLGGGAPVR ASPSPTSRQSPASPPP LGGGAPVRTAKAERRH R Q S V R T 2 1 0 0 0 1 0 3 0 0 1 0 0 0 5 2 0 0 0 1 0 0 16 0 1486.7892 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YCG0 A0A0G2JNZ2 1444 1459 SCRIB Protein scribble homolog yes no 2;3 2.8639E-10 138.28 By MS/MS By MS/MS 2 2 181710000 87933000 93780000 4759 361 5417 11983;11984;11985;11986 11652;11653;11654;11655;11656 11653 662;663 5 QSPEKSHMVFRVEVLCSGR GPEAEGPRQSPEKSHM VEVLCSGRRHTVPRRY R Q S G R R 0 2 0 0 1 1 2 1 1 0 1 1 1 1 1 3 0 0 0 3 0 0 19 2 2245.1096 Q96L94 Q96L94 18 36 SNX22 Sorting nexin-22 yes yes 2 0.029601 47.752 By MS/MS By matching 1 1 69293000 32715000 36578000 4760 2683 5418 11987;11988 11657 11657 1066 1 QSQQPMKPISPVKDPVSPASQK LEGDHTIRQSQQPMKP PVSPASQKMVIQGPSS R Q S Q K M 1 0 0 1 0 4 0 0 0 1 0 3 1 0 5 4 0 0 0 2 0 0 22 2 2376.2471 Q12888;A6NNK5 Q12888 1085 1106 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.00010947 91.774 By MS/MS By MS/MS 2 1 123500000 73283000 50218000 4761 2031 5419;5420 11989;11990;11991 11658;11659;11660 11658 807 3961;3962 3 QSSFEIPDDVPLPAGWEMAK TPTAQHLRQSSFEIPD PAGWEMAKTSSGQRYF R Q S A K T 2 0 0 2 0 1 2 1 0 1 1 1 1 1 3 2 0 1 0 1 0 0 20 0 2216.046 P46937 P46937 162 181 YAP1 Transcriptional coactivator YAP1 yes yes 2 1.0099E-33 169.6 By MS/MS By MS/MS 1 1 59327000 26161000 33166000 4762 1841 5421 11992;11993 11661;11662 11662 711 3529 2 QSSFEPEFVISPR SSNTIPTRQSSFEPEF PEFVISPRPKEEPSNL R Q S P R P 0 1 0 0 0 1 2 0 0 1 0 0 0 2 2 3 0 0 0 1 0 0 13 0 1521.7464 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 282 294 RMI1 RecQ-mediated genome instability protein 1 yes no 2 0.0090882 74.962 By MS/MS 1 5335600 5335600 0 4763 260 5422 11994 11663 11663 452 1 QSSLTFQSSDPEQMR GPSFTVMRQSSLTFQS SSDPEQMRQSLLTAIR R Q S M R Q 0 1 0 1 0 3 1 0 0 0 1 0 1 1 1 4 1 0 0 0 0 0 15 0 1739.7785 A0A0X1KG75;A0A0D9SG04;Q53SF7 A0A0X1KG75 1108 1122 COBLL1 Cordon-bleu protein-like 1 yes no 2 0.0021647 75.445 By MS/MS By MS/MS 2 2 29272000 16755000 12517000 4764 345 5423;5424 11995;11996;11997;11998 11664;11665;11666;11667;11668 11664 136 614;615 5 QSSTPSAPELGQQPDVNISEWK ________________ DVNISEWKDKPTHEIL R Q S W K D 1 0 1 1 0 3 2 1 0 1 1 1 0 0 3 4 1 1 0 1 0 0 22 0 2397.1448 I3L213;Q93100 I3L213 6 27 PHKB Phosphorylase b kinase regulatory subunit beta yes no 3 0.00019954 80.68 By MS/MS By MS/MS 2 2 95496000 46876000 48621000 4765 1307 5425;5426 11999;12000;12001;12002 11669;11670;11671 11671 2428;2429;7242 3 QSSVTQVTEQSPK ISASVAVKQSSVTQVT QVTEQSPKVQSRYTKE K Q S P K V 0 0 0 0 0 3 1 0 0 0 0 1 0 0 1 3 2 0 0 2 0 0 13 0 1417.7049 Q14966;A0A096LPH6;C9JWN0 Q14966 118 130 ZNF638 Zinc finger protein 638 yes no 2 0.0014322 108.06 By MS/MS By MS/MS 1 1 27551000 14909000 12642000 4766 2110 5427 12003;12004 11672;11673 11673 4177;7587 2 QSVQQSTSQVDTMRPRHGETCR YKMHLSSRQSVQQSTS PRHGETCRMPVPHHFF R Q S C R M 0 3 0 1 1 4 1 1 1 0 0 0 1 0 1 3 3 0 0 2 0 0 22 2 2587.198 Q8IZD9 Q8IZD9 189 210 DOCK3 Dedicator of cytokinesis protein 3 yes yes 2 0.028715 45.79 By MS/MS 1 0 0 0 4767 2447 5428 12005 11674 11674 989 1 QSVVYGGKSTIR TLQRTLQKQSVVYGGK YGGKSTIRDRSSGTAS K Q S I R D 0 1 0 0 0 1 0 2 0 1 0 1 0 0 0 2 1 0 1 2 0 0 12 1 1293.7041 E7EVX8;Q8WWY3 E7EVX8 425 436 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 3 0.025769 50.04 By MS/MS 1 2582100 2582100 0 4768 830 5429 12006 11675 11675 1548 1 QTDPSTPQQESSKPLGGIQPSSQTIQPK GILATGEKQTDPSTPQ SSQTIQPKVETDAAQA K Q T P K V 0 0 0 1 0 6 1 2 0 2 1 2 0 0 5 5 3 0 0 0 0 0 28 1 2963.4836 Q14004 Q14004 1142 1169 CDK13 Cyclin-dependent kinase 13 yes yes 3 0.0042325 53.522 By matching By MS/MS 1 1 82723000 38019000 44703000 4769 2080 5430 12007;12008 11676 11676 4104;7568 1 QTELFAHFIQPAAQKTPTSPLK NRFEYLLKQTELFAHF KTPTSPLKMKPGRPRI K Q T L K M 3 0 0 0 0 3 1 0 1 1 2 2 0 2 3 1 3 0 0 0 0 0 22 1 2452.3114 O60264 O60264 98 119 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 3 9.7426E-05 108.12 By MS/MS By MS/MS 1 1 68073000 31842000 36231000 4770 1513 5431 12009;12010 11677;11678 11677 2847;7322;7323 2 QTELFAHFIQPSAQKSPTSPLNMK KRFEFLLKQTELFAHF PTSPLNMKLGRPRIKK K Q T M K L 2 0 1 0 0 3 1 0 1 1 2 2 1 2 3 3 2 0 0 0 0 0 24 1 2699.3741 A0A0A0MRP6;B7ZLQ5;P28370 A0A0A0MRP6 101 124 SMARCA1 Probable global transcription activator SNF2L1 yes no 3 4.518E-05 83.359 By MS/MS By MS/MS 1 1 63423000 24401000 39022000 4771 227 5432 12011;12012 11679;11680 11680 96 404;6897 2 QTEPVSPVLK AIENCERRQTEPVSPV EPVSPVLKRIKRCLRS R Q T L K R 0 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 1 0 0 2 0 0 10 0 1096.6128 Q8IYH5 Q8IYH5 108 117 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 1.2916E-24 184.11 By MS/MS By MS/MS 1 1 29858000 17735000 12123000 4772 2442 5433 12013;12014 11681;11682 11681 4995 2 QTEPVSPVLKR AIENCERRQTEPVSPV PVSPVLKRIKRCLRSE R Q T K R I 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 1 1 0 0 2 0 0 11 1 1252.7139 Q8IYH5 Q8IYH5 108 118 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.0070977 79.744 By MS/MS By MS/MS 1 1 26510000 15576000 10935000 4773 2442 5434 12015;12016 11683;11684 11684 4995 2 QTLPSSPTTTK TVNPDRIKQTLPSSPT PSSPTTTKSSPSDPMT K Q T T K S 0 0 0 0 0 1 0 0 0 0 1 1 0 0 2 2 4 0 0 0 0 0 11 0 1159.6085 F8VW64;F8VWX1;F8W659;J3KQU3;P51513 F8VW64 27 37 NOVA1 RNA-binding protein Nova-1 yes no 2 3.5644E-05 131.79 By MS/MS By MS/MS 1 2 64321000 32362000 31960000 4774 1018 5435 12017;12018;12019 11685;11686 11686 1905 2 QTPTPPTTQLPQQVQPSLPAAPSADQPQQQPR QALHPPPRQTPTPPTT DQPQQQPRSQQSTAAS R Q T P R S 3 1 0 1 0 9 0 0 0 0 2 0 0 0 9 2 4 0 0 1 0 0 32 0 3431.7433 Q09472 Q09472 884 915 EP300 Histone acetyltransferase p300 yes yes 3 0.017571 42.536 By MS/MS By matching 1 1 22339000 14949000 7390000 4775 2019 5436 12020;12021 11687 11687 1 QTSAYNISNSSTFTK SSVALVPKQTSAYNIS SNSSTFTKSLSRYESM K Q T T K S 1 0 2 0 0 1 0 0 0 1 0 1 0 1 0 4 3 0 1 0 0 0 15 0 1647.774 Q9UIW2 Q9UIW2 1604 1618 PLXNA1 Plexin-A1 yes yes 2 0.011681 75.89 By MS/MS 1 5778100 0 5778100 4776 3011 5437 12022 11688 11688 8495 1 QTSLVSSR KARSQRSRQTSLVSSR QTSLVSSRREPPPYGY R Q T S R R 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 3 1 0 0 1 0 0 8 0 876.46649 G3V3A4;Q13573;G3V5R3 G3V3A4 31 38 SNW1 SNW domain-containing protein 1 yes no 2 0.0318 60.691 By MS/MS 1 5382400 5382400 0 4777 1072 5438 12023 11689 11689 1 QTVAVGVIK RFAVRDMRQTVAVGVI TVAVGVIKAVDKKAAG R Q T I K A 1 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 3 0 0 9 0 913.55967 Q5VTE0;P68104;A0A087WVQ9 Q5VTE0 431 439 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 no no 2 0.0094485 93.195 By matching By MS/MS 1 1 51825000 26889000 24936000 4778 1956 5439 12024;12025 11690 11690 1 QVAEQGGDLSPAANR RIQVAQEKQVAEQGGD DLSPAANRSQKASQSR K Q V N R S 3 1 1 1 0 2 1 2 0 0 1 0 0 0 1 1 0 0 0 1 0 0 15 0 1511.7328 O94804 O94804 429 443 STK10 Serine/threonine-protein kinase 10 yes yes 2 1.0229E-07 134.02 By MS/MS By MS/MS 1 1 41822000 22436000 19387000 4779 1567 5440 12026;12027 11691;11692 11691 2969 2 QVAGDAPVEQATAETASPVHR SEGATELRQVAGDAPV ETASPVHREEHGRGES R Q V H R E 5 1 0 1 0 2 2 1 1 0 0 0 0 0 2 1 2 0 0 3 0 0 21 0 2133.0451 A0A087X055;Q92766 A0A087X055 373 393 RREB1 Ras-responsive element-binding protein 1 yes no 3 1.4913E-05 122.41 By MS/MS By MS/MS 1 1 47059000 24670000 22389000 4780 153 5441 12028;12029 11693;11694 11693 6870 2 QVDQLTNDK EEMRELRRQVDQLTND VDQLTNDKARVEVERD R Q V D K A 0 0 1 2 0 2 0 0 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1059.5197 P08670;B0YJC4;A0A1B0GUA0 P08670 160 168 VIM Vimentin yes no 2 8.4932E-06 155.58 By MS/MS By MS/MS 1 1 29361000 17898000 11463000 4781 1663 5442 12030;12031 11695;11696 11696 2 QVEYLDLDLDSGK MIKPKGDKQVEYLDLD DLDLDSGKSTPPRKQK K Q V G K S 0 0 0 3 0 1 1 1 0 0 3 1 0 0 0 1 0 0 1 1 0 0 13 0 1493.725 B7Z3B9;Q13480 B7Z3B9 521 533 GAB1 GRB2-associated-binding protein 1 yes no 2 0.012557 69.864 By MS/MS 1 2316500 2316500 0 4782 588 5443 12032 11697 11697 8082 0 QVGETSAPGDTLDGTPR KENDTGSKQVGETSAP DTLDGTPRTLNTVFDF K Q V P R T 1 1 0 2 0 1 1 3 0 0 1 0 0 0 2 1 3 0 0 1 0 0 17 0 1699.8013 Q9NZN5;E9PMR6 Q9NZN5 689 705 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2 0.00054687 116.04 By MS/MS By MS/MS 1 1 55457000 26963000 28494000 4783 2962 5444 12033;12034 11698;11699 11698 7890 1 QVLQSTQSPR EEELKRQRQVLQSTQS LQSTQSPRTKNAPSLP R Q V P R T 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 10 0 1142.6044 Q9Y2D5 Q9Y2D5 741 750 AKAP2 A-kinase anchor protein 2 yes yes 2 0.0066357 79.744 By MS/MS By MS/MS 1 1 81887000 46141000 35746000 4784 3087 5445 12035;12036 11700;11701 11700 6628 2 QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR DGTVVTIKQVLTAPGS PAPGPCPRSNAMLAVK K Q V P R S 4 2 0 2 1 2 4 4 0 0 2 0 0 0 6 4 1 0 0 1 0 0 33 1 3361.5481 Q8TBB5 Q8TBB5 400 432 KLHDC4 Kelch domain-containing protein 4 yes yes 3 1.4115E-06 73.299 By MS/MS By MS/MS 2 2 167740000 84541000 83196000 4785 2533 5446;5447 12037;12038;12039;12040 11702;11703;11704;11705 11704 5170;5171;5172 4 QVNQISGAHNTSDKQTPSK NKKDGFYRQVNQISGA SDKQTPSKPKKKQNSK R Q V S K P 1 0 2 1 0 3 0 1 1 1 0 2 0 0 1 3 2 0 0 1 0 0 19 1 2039.0032 F5GZ90;Q9NZJ0 F5GZ90 139 157 DTL Denticleless protein homolog yes no 2 0.030061 46.069 By MS/MS 1 5724300 5724300 0 4786 952 5448 12041 11706 11706 0 QVNYNDGSQEDR GKGKRIRKQVNYNDGS NDGSQEDRDWQDDQSD K Q V D R D 0 1 2 2 0 2 1 1 0 0 0 0 0 0 0 1 0 0 1 1 0 0 12 0 1423.5964 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 1335 1346 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0017015 89.46 By matching By MS/MS 1 1 5217700 2992900 2224800 4787 319 5449 12042;12043 11707 11707 557 1 QVQKLEAKVR AALRGGKKQVQKLEAK QKLEAKVRELEAELDA K Q V V R E 1 1 0 0 0 2 1 0 0 0 1 2 0 0 0 0 0 0 0 2 0 0 10 2 1197.7194 A0A087X0T3;A7E2Y1 A0A087X0T3 1859 1868 MYH7B Myosin-7B yes no 2 0.0043878 66.351 By MS/MS By matching 1 1 10185000 6502400 3682100 4788 162 5450 12044;12045 11708 11708 1 QVQSLTCEVDALK QESTEYRRQVQSLTCE TCEVDALKGTNESLER R Q V L K G 1 0 0 1 1 2 1 0 0 0 2 1 0 0 0 1 1 0 0 2 0 0 13 0 1489.7446 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 322 334 VIM Vimentin yes no 2 0.0075524 84.31 By MS/MS 1 7580300 0 7580300 4789 1663 5451 12046 11709 11709 1 QVQSLTCEVDALKGTNESLER QESTEYRRQVQSLTCE GTNESLERQMREMEEN R Q V E R Q 1 1 1 1 1 2 3 1 0 0 3 1 0 0 0 2 2 0 0 2 0 0 21 1 2376.1591 P08670;B0YJC4;B0YJC5 P08670 322 342 VIM Vimentin yes no 3 0.016755 59.983 By MS/MS 1 4006100 0 4006100 4790 1663 5452 12047 11710 11710 1 QVSASELHTSGILGPETLR VSFRGLRRQVSASELH ILGPETLRDLAQGTKT R Q V L R D 1 1 0 0 0 1 2 2 1 1 3 0 0 0 1 3 2 0 0 1 0 0 19 0 1994.0433 A0A075B730;A0A087X1U6;P58107 A0A075B730 2691 2709 EPPK1 Epiplakin yes no 3 0.00080897 74.618 By MS/MS By MS/MS 1 1 22274000 12314000 9960500 4791 15 5453 12048;12049 11711;11712;11713 11713 26 3 QVSITGFFQR AALGKANRQVSITGFF SITGFFQRK_______ R Q V Q R K 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 1 1 0 0 1 0 0 10 0 1181.6193 Q15054;H0YEX7 Q15054 456 465 POLD3 DNA polymerase delta subunit 3 yes no 2 0.00016951 144.55 By MS/MS By MS/MS 1 1 17803000 8450400 9353000 4792 2124 5454 12050;12051 11714;11715 11715 4200 2 QVSLIAPPQSSR NSRLQILRQVSLIAPP IAPPQSSRCPSEAGAM R Q V S R C 1 1 0 0 0 2 0 0 0 1 1 0 0 0 2 3 0 0 0 1 0 0 12 0 1281.7041 Q9NPA5 Q9NPA5 545 556 ZFP64 Zinc finger protein 64 homolog, isoforms 1 and 2 yes yes 2 0.023487 63.292 By MS/MS By matching 1 1 13157000 6693100 6463600 4793 2883 5455 12052;12053 11716 11716 6074 1 QVSTENDSTLVHR VLLRSIVKQVSTENDS NDSTLVHRFPLLVAHM K Q V H R F 0 1 1 1 0 1 1 0 1 0 1 0 0 0 0 2 2 0 0 2 0 0 13 0 1484.7219 O75592 O75592 1584 1596 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 0.015735 68.283 By MS/MS By matching 1 1 11458000 6300500 5157200 4794 1550 5456 12054;12055 11717 11717 2933 1 QVVQTPNTVLSTPFR FSGVTPQRQVVQTPNT TVLSTPFRTPSNGAEG R Q V F R T 0 1 1 0 0 2 0 0 0 0 1 0 0 1 2 1 3 0 0 3 0 0 15 0 1685.9101 Q99459 Q99459 400 414 CDC5L Cell division cycle 5-like protein yes yes 2 7.3913E-06 123.63 By MS/MS By MS/MS 1 1 4634000 4634000 0 4795 2721 5457 12056;12057 11718;11719 11719 7816 2 QVVSVILASK PLRHTFVRQVVSVILA VSVILASKIEQHLIFW R Q V S K I 1 0 0 0 0 1 0 0 0 1 1 1 0 0 0 2 0 0 0 3 0 0 10 0 1042.6386 Q6W3E5 Q6W3E5 348 357 GDPD4 Glycerophosphodiester phosphodiesterase domain-containing protein 4 yes yes 2 0.0032633 93.839 By MS/MS By matching 1 1 61661000 34525000 27135000 4796 2344 5458 12058;12059 11720 11720 4745 1 QYATLDVYNPFETR VIQHRPSRQYATLDVY VYNPFETREPPPAYEP R Q Y T R E 1 1 1 1 0 1 1 0 0 0 1 0 0 1 1 0 2 0 2 1 0 0 14 0 1715.8155 O14828 O14828 34 47 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 0 322.7 By MS/MS By MS/MS 2 3 96165000 22717000 73448000 4797 1458 5459;5460 12060;12061;12062;12063;12064 11721;11722;11723;11724 11723 8188;8189 4 QYDPPAESQQSESPPRR LEFLGQLRQYDPPAES QSESPPRRDSLASLFP R Q Y R R D 1 2 0 1 0 3 2 0 0 0 0 0 0 0 4 3 0 0 1 0 0 0 17 1 1970.9082 Q6P597;K7ENJ3;K7EL76 Q6P597 155 171 KLC3 Kinesin light chain 3 yes no 3 0.028024 46.514 By matching By MS/MS 1 1 9198700 5161900 4036800 4798 2323 5461 12065;12066 11725 11725 4685;4686 1 QYEQQTYQVIPEVIK KQDLAYERQYEQQTYQ QVIPEVIKNFIQYFHK R Q Y I K N 0 0 0 0 0 4 2 0 0 2 0 1 0 0 1 0 1 0 2 2 0 0 15 0 1864.9571 H7C3A0;C9JHP4;C9K0Q7;B0QY89;Q9Y262 H7C3A0 52 66 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 2;3 6.7371E-112 232.5 By MS/MS By MS/MS 2 2 33395000 16044000 17351000 4799 513 5462 12067;12068;12069;12070 11726;11727;11728;11729;11730 11727 6980;8061 5 RAADEDWDSELEDDLLGEDLLSGK GAERSWRRRAADEDWD GEDLLSGKKNQSDLSD R R A G K K 2 1 0 6 0 0 4 2 0 0 5 1 0 0 0 2 0 1 0 0 0 0 24 1 2690.2195 Q96EV2;A8MTF7 Q96EV2 33 56 RBM33 RNA-binding protein 33 yes no 3 0.0057171 52.158 By MS/MS 1 3193900 0 3193900 4800 2644 5463 12071 11731 11731 5452 1 RAASLNYLNQPSAAPLQVSR RPSSSNMKRAASLNYL AAPLQVSRGLSASTMD K R A S R G 4 2 2 0 0 2 0 0 0 0 3 0 0 0 2 3 0 0 1 1 0 0 20 1 2155.1498 Q9NSK0 Q9NSK0 587 606 KLC4 Kinesin light chain 4 yes yes 3 0.029515 51.684 By MS/MS 1 5022200 5022200 0 4801 2916 5464 12072 11732 11732 6150 0 RADDFPVRDDPSDVTDEDEGPAEPPPPPK SEGSDTQRRADDFPVR AEPPPPPKLPLPAFRL R R A P K L 2 2 0 7 0 0 3 1 0 0 0 1 0 1 8 1 1 0 0 2 0 0 29 2 3159.4269 H0Y4Z8;Q3YEC7;A0A0X1KG72 H0Y4Z8 586 614 RABL6 Rab-like protein 6 yes no 3 0.0050712 54.717 By MS/MS By MS/MS 1 1 77798000 43961000 33837000 4802 1124 5465 12073;12074 11733;11734 11734 2133;7195 2 RAGDPGEMPQSPTGLGQPK LAGLAPKRRAGDPGEM PTGLGQPKRRGRPPSK R R A P K R 1 1 0 1 0 2 1 4 0 0 1 1 1 0 4 1 1 0 0 0 0 0 19 1 1921.9316 J3KPG5;F8VU39;Q9UIF9;H0YHL2;A0A0C4DGI9 J3KPG5 1357 1375 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A no no 1 NaN 0 0 0 4803 1011 0 RALEIDSSNLSLWIEYGTMSYALHSFASRQLK TPVLNCFRRALEIDSS SFASRQLKQWRGELPP R R A L K Q 3 2 1 1 0 1 2 1 1 2 5 1 1 1 0 6 1 1 2 0 0 0 32 2 3685.8563 A0A087WWW8;Q9Y6J0 A0A087WWW8 1081 1112 CABIN1 Calcineurin-binding protein cabin-1 yes no 3 0.010784 53.798 By MS/MS 1 9220300 9220300 0 4804 100 5466 12075 11735 11735 38 179;6856;7987 0 RALPNNTSSSPQPK ELPPGSTKRALPNNTS TSSSPQPKKKPLDGEY K R A P K K 1 1 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 14 1 1495.7743 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 147 160 TP53 Cellular tumor antigen p53 yes no 2;3 0.00016632 114.56 By MS/MS By MS/MS 2 2 104200000 39512000 64689000 4805 147 5467 12076;12077;12078;12079 11736;11737;11738 11738 241;242;243;6866 3 RALVEFESNPEETREPGSPPSVQR LTSVSRTRRALVEFES GSPPSVQRAGLGSPER R R A Q R A 1 3 1 0 0 1 5 1 0 0 1 0 0 1 4 3 1 0 0 2 0 0 24 2 2710.3311 Q9H6F5;H0YG79 Q9H6F5 30 53 CCDC86 Coiled-coil domain-containing protein 86 yes no 4 0.025216 44.312 By matching By MS/MS 1 1 22378000 11291000 11087000 4806 2841 5468 12080;12081 11739 11739 5973;7856 1 RAPSVANVGSHCDLSLK KESITRRRRAPSVANV SHCDLSLKIPEISIQD R R A L K I 2 1 1 1 1 0 0 1 1 0 2 1 0 0 1 3 0 0 0 2 0 0 17 1 1809.9156 Q5HY54;Q60FE5;P21333 Q5HY54 2109 2125 FLNA Filamin-A yes no 3 9.3016E-05 101.05 By MS/MS By MS/MS 2 1 69173000 48464000 20708000 4807 1742 5469 12082;12083;12084 11740;11741 11740 3280 2 RAQIPEGDYLSYR LGDPGSTRRAQIPEGD EGDYLSYREFHSAGRT R R A Y R E 1 2 0 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 0 13 1 1566.7791 Q96RT1 Q96RT1 1096 1108 ERBB2IP Protein LAP2 yes yes 2;3 0.00043045 91.712 By MS/MS By matching 2 2 36281000 19343000 16938000 4808 2705 5470 12085;12086;12087;12088 11742;11743 11742 8433 2 RARLCSSSSSDTSSR SSPLRKAKRARLCSSS SSSDTSSRSFFDPTSQ K R A S R S 1 3 0 1 1 0 0 0 0 0 1 0 0 0 0 7 1 0 0 0 0 0 15 2 1655.7645 C9J0I9;Q86WB0 C9J0I9 359 373 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.021217 57.788 By MS/MS 1 0 0 0 4809 624 5471 12089 11744 11744 1149;1150;1151;1152;1153 1 RASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK PSPPPPVRRASAGPAP STPLGSSKETRKQEKE R R A S K E 4 1 1 0 0 0 1 5 1 0 3 1 0 0 7 6 3 0 0 2 0 0 35 1 3293.7004 Q4KMP7 Q4KMP7 685 719 TBC1D10B TBC1 domain family member 10B yes yes 3;4 1.8535E-09 80.593 By MS/MS By MS/MS 2 3 101890000 37018000 64876000 4810 2195 5472;5473 12090;12091;12092;12093;12094 11745;11746;11747;11748;11749;11750 11748 4377;4378;4379;7622 6 RASDTSLTQGIVAFR PVSFREGRRASDTSLT TQGIVAFRQHLQNLAR R R A F R Q 2 2 0 1 0 1 0 1 0 1 1 0 0 1 0 2 2 0 0 1 0 0 15 1 1620.8584 Q9H0K1 Q9H0K1 585 599 SIK2 Serine/threonine-protein kinase SIK2 yes yes 3 0.0033721 97.352 By MS/MS 1 0 0 0 4811 2804 5474 12095 11751 11751 5867 1 RASEDTTSGSPPKK QKVEIGQKRASEDTTS TSGSPPKKSSAGPKRD K R A K K S 1 1 0 1 0 0 1 1 0 0 0 2 0 0 2 3 2 0 0 0 0 0 14 2 1459.7267 H0YER7;G3V1C3;Q9BZZ5 H0YER7 270 283 API5 Apoptosis inhibitor 5 yes no 3 0.030817 60.334 By MS/MS By matching 1 1 33651000 24678000 8973400 4812 1062 5475 12096;12097 11752 11752 2008;2009;7170 1 RASGLSTEGATGPSADTSGSELDGR PRPRRRSRRASGLSTE SGSELDGRCSLRRGSS R R A G R C 3 2 0 2 0 0 2 5 0 0 2 0 0 0 1 5 3 0 0 0 0 0 25 1 2378.0946 Q7Z628 Q7Z628 19 43 NET1 Neuroepithelial cell-transforming gene 1 protein yes yes 3 1.7923E-11 109.19 By MS/MS By MS/MS 1 1 35291000 16932000 18359000 4813 2392 5476 12098;12099 11753;11754 11754 4872 1 RASGQAFELILSPR IQVKELEKRASGQAFE FELILSPRSKESVPEF K R A P R S 2 2 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 14 1 1543.8471 A2A2D0;P16949 A2A2D0 14 27 STMN1 Stathmin yes no 2;3 3.5359E-34 181.23 By MS/MS By MS/MS 6 6 657040000 361450000 295590000 4814 447 5477;5478 12100;12101;12102;12103;12104;12105;12106;12107;12108;12109;12110;12111 11755;11756;11757;11758;11759;11760;11761;11762;11763;11764;11765;11766;11767;11768;11769;11770;11771;11772;11773 11767 834;835 18 RASISEPSDTDPEPR VKSRVRVRRASISEPS SDTDPEPRTLNPSPAG R R A P R T 1 2 0 2 0 0 2 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 15 1 1655.7751 C9JQV3;Q8N1F8 C9JQV3 385 399 STK11IP Serine/threonine-protein kinase 11-interacting protein yes no 2;3 8.5237E-05 120.99 By MS/MS By MS/MS 3 3 106190000 55886000 50305000 4815 686 5479;5480 12112;12113;12114;12115;12116;12117 11774;11775;11776;11777;11778;11779;11780 11776 1263;1264;1265 7 RASLSDIGFGK KPLSRMSRRASLSDIG LSDIGFGKLETYVKLD R R A G K L 1 1 0 1 0 0 0 2 0 1 1 1 0 1 0 2 0 0 0 0 0 0 11 1 1149.6142 Q07002;D6R9B0;A0A0A0MSJ6;D6RA44 Q07002 128 138 CDK18 Cyclin-dependent kinase 18 yes no 2 0.0022315 100.54 By MS/MS By MS/MS 1 1 14934000 8635800 6298600 4816 2008 5481 12118;12119 11781;11782 11781 3870;3871 2 RASLSEIGFGK QPMSRRSRRASLSEIG LSEIGFGKMETYIKLE R R A G K M 1 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 0 0 0 11 1 1163.6299 F5H6Z0;Q00537 F5H6Z0 125 135 CDK17 Cyclin-dependent kinase 17 yes no 2 0.00082735 110.55 By MS/MS By MS/MS 1 1 41310000 16636000 24674000 4817 985 5482 12120;12121 11783;11784 11783 1846 2 RASPPVSPIPVSEYCESENK EHIEVEEKRASPPVSP EYCESENKWSQEKHSP K R A N K W 1 1 1 0 1 0 3 0 0 1 0 1 0 0 4 4 0 0 1 2 0 0 20 1 2245.0685 A0A087WX12;A0A087X032;A0A087WTH3;A0A087X251;A0A087X0T6;Q2M2Z5 A0A087WX12 110 129 KIZ Centrosomal protein kizuna yes no 3 0.026082 53.037 By MS/MS By MS/MS 1 1 7692300 7692300 0 4818 34 5483 12122;12123 11785;11786 11786 64;65 2 RASPSPPPKR SPPPPPKRRASPSPPP SPSPPPKRRVSHSPPP R R A K R R 1 2 0 0 0 0 0 0 0 0 0 1 0 0 4 2 0 0 0 0 0 0 10 2 1091.62 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 633 642 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0095213 79.089 By MS/MS 2 0 0 0 4819 511 5484 12124;12125 11787;11788 11788 948;949 2 RASQEANLLTLAQK IQSTRRRRRASQEANL NLLTLAQKAVELASLQ R R A Q K A 3 1 1 0 0 2 1 0 0 0 3 1 0 0 0 1 1 0 0 0 0 0 14 1 1541.8526 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 459 472 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 2;3 8.2249E-12 142.39 By MS/MS By MS/MS 2 2 68255000 36107000 32148000 4820 259 5485 12126;12127;12128;12129 11789;11790;11791;11792 11792 450 4 RASSKGGGGYTCQSGSGWDEFTK AISVPRVRRASSKGGG SGWDEFTKHVTSECLG R R A T K H 1 1 0 1 1 1 1 6 0 0 0 2 0 1 0 4 2 1 1 0 0 0 23 2 2422.0608 P15924 P15924 163 185 DSP Desmoplakin yes yes 2;3 0.0017989 68.634 By MS/MS By MS/MS 2 1 51722000 31368000 20354000 4821 1708 5486 12130;12131;12132 11793;11794 11794 3208;3210;3211;8230 2 RASSLNFLNK EPPNPRMKRASSLNFL SSLNFLNKSVEEPTQP K R A N K S 1 1 2 0 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 10 1 1148.6302 Q9H0B6;A8MZ87 Q9H0B6 579 588 KLC2 Kinesin light chain 2 yes no 2 0.0064038 83.204 By MS/MS By matching 1 1 30033000 16415000 13618000 4822 2800 5487 12133;12134 11795 11795 5844;5845 1 RASWASENGETDAEGTQMTPAK HSPRGTKRRASWASEN GTQMTPAKRPALQDSN R R A A K R 4 1 1 1 0 1 3 2 0 0 0 1 1 0 1 2 3 1 0 0 0 0 22 1 2336.0339 Q12789 Q12789 1863 1884 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.0035798 69.439 By MS/MS 1 14933000 0 14933000 4823 2025 5488 12135 11796 11796 802 3938 1 RAVSVPASFFR LPRGRRSRRAVSVPAS SVPASFFRRLAPSPAR R R A F R R 2 2 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 0 2 0 0 11 1 1235.6775 O14654 O14654 424 434 IRS4 Insulin receptor substrate 4 yes yes 2 0.002663 89.629 By matching By MS/MS 1 1 25507000 14180000 11326000 4824 1453 5489 12136;12137 11797;11798 11797 2681 2 RAYSQKAQNSWK EQEELRDKRAYSQKAQ QKAQNSWKKRQVFKSL K R A W K K 2 1 1 0 0 2 0 0 0 0 0 2 0 0 0 2 0 1 1 0 0 0 12 2 1465.7426 Q8N9T8 Q8N9T8 571 582 KRI1 Protein KRI1 homolog yes yes 2 0.010639 68.847 By MS/MS 1 0 0 0 4825 2490 5490 12138 11799 11799 5083 1 RDELSEEINNLR ________________ SEEINNLREKVMKQSE R R D L R E 0 2 2 1 0 0 3 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 12 1 1486.7376 A0A087WYS2;A0A087WZG9;B4DSP0;A0A087WXK2;A0A087WUL4;A0A087WX23;Q86TG7 A0A087WYS2 6 17 PEG10 Retrotransposon-derived protein PEG10 yes no 2 0.02692 64.654 By MS/MS By matching 1 1 12965000 7482600 5482600 4826 56 5491 12139;12140 11800 11800 98 1 RDPATLK VLTEIGPKRDPATLKL KRDPATLKLFLSNMER K R D L K L 1 1 0 1 0 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 0 0 7 1 799.4552 O14732 O14732 178 184 IMPA2 Inositol monophosphatase 2 yes yes 2 0.014202 70.908 By MS/MS 1 0 0 0 4827 1456 5492 12141 11801 11801 7291 1 RDQEGSVGPSDFGPR HSDSLPRRRDQEGSVG GPSDFGPRSIDPTLTR R R D P R S 0 2 0 2 0 1 1 3 0 0 0 0 0 1 2 2 0 0 0 1 0 0 15 1 1602.7386 C9JDF5;A0A0C4DG26;Q9NP71 C9JDF5 66 80 MLXIPL Carbohydrate-responsive element-binding protein yes no 3 0.028035 46.746 By MS/MS 1 4495400 0 4495400 4828 307 5493 12142 11802 11802 534 1 RDSDGVDGFEAEGK IHNNRKRRRDSDGVDG DGFEAEGKKDKKDYDN R R D G K K 1 1 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1480.643 Q96KR1 Q96KR1 1052 1065 ZFR Zinc finger RNA-binding protein yes yes 3 0.0055354 65.924 By MS/MS By MS/MS 1 1 9568600 4329700 5238800 4829 2679 5494 12143;12144 11803;11804;11805 11804 5536 3 RDSFDDR WEEKRHFRRDSFDDRG RRDSFDDRGPSLNPVL R R D D R G 0 2 0 3 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 7 1 909.39406 A8MXP9;D6REM6;A0A0R4J2E8;P43243;D6R991 A8MXP9 186 192 MATR3 Matrin-3 yes no 2 0.027825 70.552 By MS/MS 1 0 0 0 4830 503 5495 12145 11806 11806 917 1 RDSFDDRGPSLNPVLDYDHGSR WEEKRHFRRDSFDDRG LDYDHGSRSQESGYYD R R D S R S 0 3 1 5 0 0 0 2 1 0 2 0 0 1 2 3 0 0 1 1 0 0 22 2 2517.1633 A8MXP9;D6REM6;A0A0R4J2E8;P43243;D6R991 A8MXP9 186 207 MATR3 Matrin-3 yes no 3;4 0.00018941 104.96 By MS/MS By MS/MS 2 2 1585600000 741470000 844160000 4831 503 5496 12146;12147;12148;12149 11807;11808;11809;11810 11808 917;918 4 RDSFDNCSLGESSK NAIKRLHKRDSFDNCS CSLGESSKIGISDISS K R D S K I 0 1 1 2 1 0 1 1 0 0 1 1 0 1 0 4 0 0 0 0 0 0 14 1 1600.6787 Q5UIP0 Q5UIP0 1686 1699 RIF1 Telomere-associated protein RIF1 yes yes 2;3 6.3343E-11 140.75 By MS/MS By MS/MS 2 1 110910000 70904000 40004000 4832 2261 5497 12150;12151;12152 11811;11812;11813 11811 4528 3 RDSFIGTPYWMAPEVVMCETSK KNTRTIQRRDSFIGTP VVMCETSKDRPYDYKA R R D S K D 1 1 0 1 1 0 2 1 0 1 0 1 2 1 2 2 2 1 1 2 0 0 22 1 2603.1859 Q9H2G2 Q9H2G2 187 208 SLK STE20-like serine/threonine-protein kinase yes yes 3 3.8903E-05 97.825 By MS/MS By MS/MS 2 2 102900000 57719000 45181000 4833 2818 5498;5499 12153;12154;12155;12156 11814;11815;11816;11817 11816 1118;1119 5901;7848 4 RDSLEEGELR QSDDRDSKRDSLEEGE SLEEGELRDHRMEITI K R D L R D 0 2 0 1 0 0 3 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 1 1202.5891 J3QR29;A0A0D9SEI3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;P21127;A0A087WYI9;A0A087X1I0;J3KS35;E7ESP2;E9PFJ2;Q5QPR4;Q5QPR3;Q9UQ88 Q5QPR4 11 20 CDK11B;CDC2L1;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 2 0.005253 85.287 By MS/MS By matching 1 1 45124000 25276000 19848000 4834 333;2230 5500 12157;12158 11818 11818 590 1 RDSLTGSSDLYK SNTGSGSRRDSLTGSS TGSSDLYKRTSSSLTP R R D Y K R 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 0 0 12 1 1340.6572 Q5T1Z4;Q5T1Z8;Q14671;H0YDK8;E9PR38 Q5T1Z4 708 719 PUM1 Pumilio homolog 1 yes no 2 0.001005 101.72 By MS/MS By MS/MS 1 1 54914000 27392000 27522000 4835 2096 5501 12159;12160 11819;11820 11819 4131 2 RDSLTSPEDELGAEVGDEAGDKK RSSASELRRDSLTSPE GDEAGDKKSPWQRREE R R D K K S 2 1 0 4 0 0 4 3 0 0 2 2 0 0 1 2 1 0 0 1 0 0 23 2 2417.1194 A8MVW0 A8MVW0 787 809 FAM171A2 Protein FAM171A2 yes yes 3 2.9358E-35 163.04 By MS/MS By MS/MS 1 1 27784000 14664000 13120000 4836 499 5502 12161;12162 11821;11822 11821 913;6967 2 RDSPPPPAR VTRSNSLRRDSPPPPA DSPPPPARARQENGMP R R D A R A 1 2 0 1 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 9 1 991.51993 O96013;M0R2X4 O96013 102 110 PAK4 Serine/threonine-protein kinase PAK 4 yes no 3 0.018285 66.538 By MS/MS By MS/MS 2 1 6626500 1098900 5527500 4837 1617 5503 12163;12164;12165 11823;11824 11824 3062 1 RDSSDDWEIPDGQITVGQR NRMKTLGRRDSSDDWE GQITVGQRIGSGSFGT R R D Q R I 0 2 0 4 0 2 1 2 0 2 0 0 0 0 1 2 1 1 0 1 0 0 19 1 2173.0036 P15056;H7C560 P15056 444 462 BRAF Serine/threonine-protein kinase B-raf yes no 2;3 0.00025552 114.63 By MS/MS By MS/MS 2 2 105960000 47293000 58667000 4838 1703 5504 12166;12167;12168;12169 11825;11826;11827;11828;11829 11826 3202;3203 5 RDSSDTTPLLNGSSQDR HSSTRDGRRDSSDTTP LNGSSQDRMFETMAIE R R D D R M 0 2 1 3 0 1 0 1 0 0 2 0 0 0 1 4 2 0 0 0 0 0 17 1 1847.8609 B4DQA8;E9PCW1 B4DQA8 47 63 GOSR1 Golgi SNAP receptor complex member 1 yes no 2 0.00026823 108.17 By MS/MS By MS/MS 1 1 19952000 7819700 12132000 4839 557 5505 12170;12171 11830;11831;11832 11830 21 1034 3 RDSSESQLASTESDKPTTGR PCLLMELRRDSSESQL SDKPTTGRVYESDSSN R R D G R V 1 2 0 2 0 1 2 1 0 0 1 1 0 0 1 5 3 0 0 0 0 0 20 2 2151.004 K7EQH1;A0A087WVF1;Q5BIX2;Q96B23 K7EQH1 64 83 C18orf25;ARKL1 Uncharacterized protein C18orf25 yes no 3 0.0027131 74.278 By matching By MS/MS 2 2 98591000 55050000 43541000 4840 76 5506;5507 12172;12173;12174;12175 11833;11834 11833 137;138 1 RDSWSYINSK SILQEENRRDSWSYIN SWSYINSKSNDD____ R R D S K S 0 1 1 1 0 0 0 0 0 1 0 1 0 0 0 3 0 1 1 0 0 0 10 1 1254.5993 P13612 P13612 1019 1028 ITGA4 Integrin alpha-4 yes yes 2 0.00040435 115.24 By MS/MS By MS/MS 1 1 25678000 16082000 9595100 4841 1692 5508 12176;12177 11835;11836 11835 3191;3192 2 REDFQDISVPVQEDELSKVEESSEISPEPK ECESLTERREDFQDIS SEISPEPKTEMKTLRW R R E P K T 0 1 0 3 0 2 7 0 0 2 1 2 0 1 3 5 0 0 0 3 0 0 30 2 3444.642 O94782 O94782 450 479 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 4 0.016707 45.635 By MS/MS By matching 1 1 17122000 8476200 8646200 4842 1566 5509 12178;12179 11837;11838 11838 2965;2966 2 REEDEPEERSGDETPGSEVPGDK GEEQGLGKREEDEPEE GSEVPGDKAAEEQGDD K R E D K A 0 2 0 3 0 0 7 3 0 0 0 1 0 0 3 2 1 0 0 1 0 0 23 2 2543.0896 H3BQZ7;Q1KMD3 H3BQZ7 152 174 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 3 0.026752 51.688 By matching By MS/MS 1 1 36398000 19717000 16681000 4843 1244 5510 12180;12181 11839 11839 2320 1 REEGPPPPSPDGASSDAEPEPPSGR TQPSTARRREEGPPPP EPEPPSGRTESPATAA R R E G R T 2 2 0 2 0 0 4 3 0 0 0 0 0 0 8 4 0 0 0 0 0 0 25 1 2514.1259 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 14 38 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 1.8928E-06 105.74 By MS/MS By MS/MS 2 2 55209000 25137000 30072000 4844 616 5511;5512 12182;12183;12184;12185 11840;11841;11842;11843;11844 11841 1120;1121;1122 5 REEPEALYAAVNK IIPGSEVKREEPEALY ALYAAVNKKPTSAAYS K R E N K K 3 1 1 0 0 0 3 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 13 1 1488.7573 A0A087WVF7;Q9NZM3 A0A087WVF7 944 956 ITSN2 Intersectin-2 yes no 2 0.015689 52.247 By MS/MS By matching 1 1 26398000 14003000 12395000 4845 77 5513 12186;12187 11845 11845 7983 1 REESPMDVDQPSPSAQDTQSIASDGTPQGEK SQSEASVRREESPMDV DGTPQGEKEKEERPPE R R E E K E 2 1 0 4 0 4 3 2 0 1 0 1 1 0 4 5 2 0 0 1 0 0 31 1 3286.4532 Q7Z6Z7;H0Y659 Q7Z6Z7 3805 3835 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 3 3.2368E-10 104.65 By MS/MS By MS/MS 2 2 105050000 46875000 58178000 4846 2394 5514;5515 12188;12189;12190;12191 11846;11847;11848;11849;11850;11851 11851 972 4888 6 REFITGDVEPTDAESEWHSENEEEEK YQPLFDKRREFITGDV SENEEEEKLAGDMKSK R R E E K L 1 1 1 2 0 0 9 1 1 1 0 1 0 1 1 2 2 1 0 1 0 0 26 1 3091.3167 E9PNJ7;A8MXH2;C9J6D1;Q99733;E9PS34;E9PKT8;C9JZI7 E9PNJ7 107 132 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 3 5.6561E-07 100.81 By MS/MS By MS/MS 1 1 99596000 54230000 45367000 4847 502 5516 12192;12193 11852;11853;11854 11852 914;915 3 RESESESDETPPAAPQLIK AAKTAKRKRESESESD PAAPQLIKKEKKKSKK K R E I K K 2 1 0 1 0 1 4 0 0 1 1 1 0 0 3 3 1 0 0 0 0 0 19 1 2083.0069 O60832 O60832 449 467 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 0.0008518 85.805 By MS/MS By MS/MS 1 1 14354000 8439400 5914800 4848 1530 5517 12194;12195 11855;11856 11856 2891;2892;2893;7334 2 RESLGLESK GAYRPGTRRESLGLES ESLGLESKDGS_____ R R E S K D 0 1 0 0 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 9 1 1017.5455 Q96BH1 Q96BH1 448 456 RNF25 E3 ubiquitin-protein ligase RNF25 yes yes 2 0.0055431 93.442 By MS/MS By MS/MS 1 1 38750000 21771000 16980000 4849 2625 5518 12196;12197 11857;11858 11857 5401;5402 2 RESNTPAPSTQGLPDSWGIIAEPR YVNMDFTKRESNTPAP WGIIAEPRQSAFSNYV K R E P R Q 2 2 1 1 0 1 2 2 0 2 1 0 0 0 4 3 2 1 0 0 0 0 24 1 2578.2776 O14654 O14654 929 952 IRS4 Insulin receptor substrate 4 yes yes 3 0.02011 54.261 By MS/MS By MS/MS 1 2 18667000 6832300 11835000 4850 1453 5519 12198;12199;12200 11859;11860 11860 2683;7287 1 RESPSPAPKPR TKHKGTEKRESPSPAP PSPAPKPRKVELSESE K R E P R K 1 2 0 0 0 0 1 0 0 0 0 1 0 0 4 2 0 0 0 0 0 0 11 2 1220.6626 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 443 453 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.0058797 80.371 By MS/MS By MS/MS 3 1 192140000 85308000 106830000 4851 511 5520;5521 12201;12202;12203;12204 11861;11862;11863 11862 950;951 3 RFNGDVLSPSYIQSFRDR RRRPVPIKRFNGDVLS YIQSFRDRQTGSSLSS K R F D R Q 0 3 1 2 0 1 0 1 0 1 1 0 0 2 1 3 0 0 1 1 0 0 18 2 2156.0763 Q66K66 Q66K66 307 324 TMEM198 Transmembrane protein 198 yes yes 2 0.026416 50.077 By MS/MS 1 7004200 7004200 0 4852 2288 5522 12205 11864 11864 4601;4602 0 RFPGSMEGFVTLDEVGDEEDSELQK AKKKLKKRRFPGSMEG EEDSELQKLRKSGMAF R R F Q K L 0 1 0 3 0 1 5 3 0 0 2 1 1 2 1 2 1 0 0 2 0 0 25 1 2813.2702 A8MXP9;Q68E03 A8MXP9 718 742 MATR3;DKFZp686L22104 yes no 3 0.025985 50.986 By MS/MS By MS/MS 1 1 28108000 15336000 12771000 4853 503 5523 12206;12207 11865;11866 11866 200 919 2 RFSDFLGLYEK SKQFAVKRRFSDFLGL DFLGLYEKLSEKHSQN R R F E K L 0 1 0 1 0 0 1 1 0 0 2 1 0 2 0 1 0 0 1 0 0 0 11 1 1373.698 Q13596 Q13596 186 196 SNX1 Sorting nexin-1 yes yes 2 0.00010136 120.92 By MS/MS By MS/MS 1 1 9708900 4853800 4855200 4854 2070 5524 12208;12209 11867;11868 11867 4086 2 RFSDQAGPAIPTSNSYSK VSANPKQRRFSDQAGP PTSNSYSKKTQSNNAE R R F S K K 2 1 1 1 0 1 0 1 0 1 0 1 0 1 2 4 1 0 1 0 0 0 18 1 1924.9279 E7ETY4;E9PC69 E7ETY4 374 391 MARK2 yes no 2 0.00022943 98.391 By MS/MS By MS/MS 1 1 17587000 8390200 9196500 4855 823 5525 12210;12211 11869;11870;11871 11871 1515;1516;1517 3 RFSDSEGEETVPEPR GGCAGSRRRFSDSEGE EETVPEPRLPLLDHQG R R F P R L 0 2 0 1 0 0 4 1 0 0 0 0 0 1 2 2 1 0 0 1 0 0 15 1 1733.7857 A0A1B0GWH8;H3BPL0;A0A0D9SF04;Q9UBH5;Q9UP10;H3BR00;O95090;H3BR84;H3BQ48;Q9UBD8;A0A1B0GV41;A0A0D9SFH9;A0A1B0GW34;A0A1B0GV71;A0A0A0MRC7;A0A1B0GWD3;A0A024QZB8;Q13286 A0A1B0GWH8 10 24 CLN3 Battenin yes no 2;3 0.010627 69.422 By MS/MS By MS/MS 2 1 14077000 9524000 4553200 4856 0 5526;5527 12212;12213;12214 11872;11873;11874 11872 0;1 1 RFSEGVLQSPSQDQEK RPTSLVQRRFSEGVLQ SPSQDQEKLGGSLAAL R R F E K L 0 1 0 1 0 3 2 1 0 0 1 1 0 1 1 3 0 0 0 1 0 0 16 1 1833.8857 Q9C0C2 Q9C0C2 427 442 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 2.172E-31 166.47 By MS/MS By MS/MS 1 1 46972000 26734000 20238000 4857 2791 5528 12215;12216 11875;11876 11875 5814;5815 2 RFSFCCSPEPEAEAEAAAGPGPCER EDAAREIRRFSFCCSP AGPGPCERLLSRVAAL R R F E R L 5 2 0 0 3 0 5 2 0 0 0 0 0 2 4 2 0 0 0 0 0 0 25 1 2781.1581 E7EMC7;Q13501;D6RBF1;C9J6J8;E3W990 E7EMC7 22 46 SQSTM1 Sequestosome-1 yes no 3 0.0026235 58.272 By MS/MS By matching 1 1 14977000 6248700 8728500 4858 790 5529 12217;12218 11877 11877 1408 1 RFSLSPSLGPQASR LSPCPPQRRFSLSPSL SLGPQASRFLPSARSS R R F S R F 1 2 0 0 0 1 0 1 0 0 2 0 0 1 2 4 0 0 0 0 0 0 14 1 1501.8001 Q9NYF3 Q9NYF3 230 243 FAM53C Protein FAM53C yes yes 2 0.014882 63.46 By matching By MS/MS 1 1 40978000 21007000 19971000 4859 2946 5530 12219;12220 11878 11878 6208;6209 0 RFSLSVPR NKMKNFKRRFSLSVPR RFSLSVPRTETIEESL R R F P R T 0 2 0 0 0 0 0 0 0 0 1 0 0 1 1 2 0 0 0 1 0 0 8 1 960.5505 Q07002;D6R9B0;A0A0A0MSJ6;D6R9X1 Q07002 10 17 CDK18 Cyclin-dependent kinase 18 yes no 2 0.01739 79.036 By MS/MS By matching 1 1 19051000 10302000 8748600 4860 2008 5531 12221;12222 11879 11879 3872 1 RFSMEDVSK FQRRQNQRRFSMEDVS FSMEDVSKRLSLPMDI R R F S K R 0 1 0 1 0 0 1 0 0 0 0 1 1 1 0 2 0 0 0 1 0 0 9 1 1097.5175 Q07002 Q07002 85 93 CDK18 Cyclin-dependent kinase 18 yes yes 2 0.013146 70.488 By MS/MS 1 3231600 3231600 0 4861 2008 5532 12223 11880 11880 792 3873 1 RGAPSSPATGVLPSPQGK SSLSRYFRRGAPSSPA VLPSPQGKSTSLSKAS R R G G K S 2 1 0 0 0 1 0 3 0 0 1 1 0 0 4 3 1 0 0 1 0 0 18 1 1705.9111 Q5SRE5 Q5SRE5 1704 1721 NUP188 Nucleoporin NUP188 homolog yes yes 3 0.0099203 62.069 By MS/MS By MS/MS 1 2 12676000 4590500 8085400 4862 2231 5533;5534 12224;12225;12226 11881;11882;11883 11881 4462;4463;4464 1 RGEGDAPFSEPGTTSTQRPSSPETATK SPSPASGRRGEGDAPF SSPETATKQPSSPYED R R G T K Q 2 2 0 1 0 1 3 3 0 0 0 1 0 1 4 4 5 0 0 0 0 0 27 2 2790.3056 Q9UQ35;I3L4D8;I3L182;I3L1I8;A0A087X1W1 Q9UQ35 303 329 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3;4 1.1138E-05 79.845 By MS/MS By MS/MS 2 2 440090000 217820000 222270000 4863 3074 5535;5536 12227;12228;12229;12230 11884;11885;11886;11887 11887 6522;6523;6524;7923;7924 4 RGFSDSGGGPPAK GRGSLLLRRGFSDSGG SGGGPPAKQRDLEGAV R R G A K Q 1 1 0 1 0 0 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 13 1 1231.5945 Q9H307;G3V5F0;G3V579 Q9H307 63 75 PNN Pinin yes no 3 0.017228 60.246 By matching By MS/MS 1 1 10010000 4303300 5706900 4864 2826 5537 12231;12232 11888 11888 5926 0 RGLLYDSDEEDEERPAR GRGLGRMRRGLLYDSD EDEERPARKRRQVERA R R G A R K 1 3 0 3 0 0 4 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 17 2 2048.9399 P49736 P49736 133 149 MCM2 DNA replication licensing factor MCM2 yes yes 4 0.01529 55.66 By MS/MS 1 7284100 7284100 0 4865 1857 5538 12233 11889 11889 3578 1 RGNDPLTSSPGR ASSPAQRRRGNDPLTS PLTSSPGRSSRRTDAL R R G G R S 0 2 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 12 1 1255.6269 P49736;C9J013;C9JZ21;F8WDM3 P49736 19 30 MCM2 DNA replication licensing factor MCM2 yes no 2 6.659E-07 133.15 By MS/MS 1 142370000 0 142370000 4866 1857 5539 12234 11890 11890 3579;3580 1 RGPNYTSGYGTNSELSNPSETESER YSGRGRGRRGPNYTSG PSETESERKDELSDWS R R G E R K 0 2 3 0 0 0 4 3 0 0 1 0 0 0 2 5 3 0 2 0 0 0 25 1 2731.1958 E7EU85;E9PFF5;B4DXZ6;P51114 E7EU85 306 330 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 3 9.4408E-06 83.695 By MS/MS By MS/MS 2 1 59248000 42515000 16733000 4867 569 5540;5541 12235;12236;12237 11891;11892;11893 11891 1049;1050;6994 3 RGSDASDFDISEIQSVCSDVETVPQTHRPTPR AGSRASSRRGSDASDF QTHRPTPRAGSRPSTA R R G P R A 1 3 0 4 1 2 2 1 1 2 0 0 0 1 3 5 3 0 0 3 0 0 32 2 3585.6754 H0YC65;E9PHM6;F6QMI7;F8W9J4;Q03001 H0YC65 197 228 DST Dystonin yes no 4 0.016086 44.844 By MS/MS 1 6385000 6385000 0 4868 879 5542 12238 11894 11894 1630;1631 1 RGSFSSENYWR VLLPTHRRRGSFSSEN FSSENYWRKSYESSED R R G W R K 0 2 1 0 0 0 1 1 0 0 0 0 0 1 0 3 0 1 1 0 0 0 11 1 1387.6269 K7ER58;Q6P6C2 K7ER58 18 28 ALKBH5 RNA demethylase ALKBH5 yes no 2;3 0.0031341 75.483 By MS/MS By MS/MS 2 2 138850000 74035000 64820000 4869 1394 5543 12239;12240;12241;12242 11895;11896;11897;11898 11898 2564;2565 4 RGSGDTSSLIDPDTSLSELR PLSGNSSRRGSGDTSS DTSLSELRDIYDLKDQ R R G L R D 0 2 0 3 0 0 1 2 0 1 3 0 0 0 1 5 2 0 0 0 0 0 20 1 2105.0237 C9JSU1;Q9Y608 C9JSU1 94 113 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2;3 0.00040881 111.83 By MS/MS By MS/MS 3 2 339120000 172880000 166230000 4870 693 5544;5545 12243;12244;12245;12246;12247 11899;11900;11901;11902;11903;11904 11901 1279;1280;1281;1282;7039 5 RGSGSALGGPLDPQFVGPSDTSLGAAPGHR SEPGLLARRGSGSALG LGAAPGHRVLPCGPSP R R G H R V 3 2 0 2 0 1 0 7 1 0 3 0 0 1 4 4 1 0 0 1 0 0 30 1 2860.4216 P98174 P98174 46 75 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 3 0.0023753 62.049 By MS/MS By MS/MS 1 1 11811000 11811000 0 4871 1971 5546 12248;12249 11905;11906 11905 3772;3773 2 RGSIGENQIKDEK EEEEEKPKRGSIGENQ ENQIKDEKIKKDKEPK K R G E K I 0 1 1 1 0 1 2 2 0 2 0 2 0 0 0 1 0 0 0 0 0 0 13 2 1472.7583 E9PGZ1;C9J813 E9PGZ1 194 206 CALD1 yes no 3 0.0070793 78.166 By MS/MS 1 27729000 27729000 0 4872 876 5547 12250 11907 11907 1620 1 RGSLEMSSDGEPLSR SSATSGGRRGSLEMSS SDGEPLSRMDSEDSIS R R G S R M 0 2 0 1 0 0 2 2 0 0 2 0 1 0 1 4 0 0 0 0 0 0 15 1 1619.7573 Q6ZN18 Q6ZN18 204 218 AEBP2 Zinc finger protein AEBP2 yes yes 3 0.0024639 87.496 By MS/MS By MS/MS 2 1 12775000 7477700 5297400 4873 2348 5548;5549 12251;12252;12253 11908;11909;11910 11909 946 4764 3 RGSLLGSMK KKKGGLFRRGSLLGSM GSLLGSMKLRKSESKS R R G M K L 0 1 0 0 0 0 0 2 0 0 2 1 1 0 0 2 0 0 0 0 0 0 9 1 947.52224 Q9HDC5 Q9HDC5 214 222 JPH1 Junctophilin-1 yes yes 2 0.0059356 99.343 By MS/MS 1 7949500 7949500 0 4874 2882 5550 12254 11911 11911 6073 1 RGSLSNAGDPEIVK DESEEEGRRGSLSNAG AGDPEIVKSPSDPKQY R R G V K S 1 1 1 1 0 0 1 2 0 1 1 1 0 0 1 2 0 0 0 1 0 0 14 1 1441.7525 F5H7V1;B1AKJ5;O43847 F5H7V1 92 105 NRD1 Nardilysin yes no 2 0.00138 93.738 By MS/MS By MS/MS 1 1 173510000 105170000 68342000 4875 521 5551 12255;12256 11912;11913 11913 977 2 RGSMSYLAAVEEEVEESSVK ASERKLNRRGSMSYLA EVEESSVKSDNGDEKA R R G V K S 2 1 0 0 0 0 5 1 0 0 1 1 1 0 0 4 0 0 1 3 0 0 20 1 2199.0365 Q8WXH0;A0A0C4DGK3;G3V5X4;A0A0A0MRE3 Q8WXH0 4106 4125 SYNE2 Nesprin-2 yes no 3 0.00019568 118.19 By MS/MS 1 4346400 0 4346400 4876 2570 5552 12257 11914 11914 1031 5268;5269 1 RGSPSAAFTFPDTDDFGK MPGGGGNRRGSPSAAF PDTDDFGKLLLAEALL R R G G K L 2 1 0 3 0 0 0 2 0 0 0 1 0 3 2 2 2 0 0 0 0 0 18 1 1914.8748 H7C055;Q9ULT0 H7C055 49 66 TTC7A Tetratricopeptide repeat protein 7A yes no 3 0.0027248 87.668 By MS/MS 1 0 0 0 4877 1268 5553 12258 11915 11915 2353 1 RGSSGSVDETLFALPAASEPVIR STPAAPKRRGSSGSVD AASEPVIRSSAENMDL R R G I R S 3 2 0 1 0 0 2 2 0 1 2 0 0 1 2 4 1 0 0 2 0 0 23 1 2358.2179 Q9NQC3 Q9NQC3 179 201 RTN4 Reticulon-4 yes yes 3 0.00047025 72.864 By MS/MS By MS/MS 1 2 27364000 7313300 20050000 4878 2893 5554;5555 12259;12260;12261 11916;11917 11917 6089;6090;6091;7869 2 RGSSPGSLEIPK GNASTMTRRGSSPGSL PGSLEIPKDLPDILNK R R G P K D 0 1 0 0 0 0 1 2 0 1 1 1 0 0 2 3 0 0 0 0 0 0 12 1 1226.6619 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 1317 1328 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 2 0.011678 74.853 By MS/MS By MS/MS 1 1 20651000 9746100 10905000 4879 420 5556 12262;12263 11918;11919 11918 784 2 RGTGQSDDSDIWDDTALIK QEDSVLFRRGTGQSDD WDDTALIKAYDKAVAS R R G I K A 1 1 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 19 1 2091.9709 B4DP61;E7EQZ4;Q16637 B4DP61 23 41 SMN2;SMN1 Survival motor neuron protein yes no 2;3 1.5692E-56 187.57 By MS/MS By MS/MS 4 4 475460000 239890000 235570000 4880 554 5557;5558 12264;12265;12266;12267;12268;12269;12270;12271 11920;11921;11922;11923;11924;11925;11926 11926 1028;1029;6992 7 RGTSLMEDDEEPIVEDVMMSSEGR QTPLDYNRRGTSLMED VMMSSEGRIEDLNEGM R R G G R I 0 2 0 3 0 0 5 2 0 1 1 0 3 0 1 3 1 0 0 2 0 0 24 1 2711.1724 Q8N3U4 Q8N3U4 1158 1181 STAG2 Cohesin subunit SA-2 yes yes 3 0.0020744 80.835 By matching By MS/MS 1 1 24976000 11019000 13957000 4881 2468 5559 12272;12273 11927 11927 1000;1001;1002 7720 1 RGTSPRPPEGGLGYSQLGDDDLK KSEQQRVKRGTSPRPP QLGDDDLKETGFHLTT K R G L K E 0 2 0 3 0 1 1 5 0 0 3 1 0 0 3 2 1 0 1 0 0 0 23 2 2414.1826 J3QR29;A0A0D9SEI3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;P21127;Q5QPR4;Q5QPR3;Q9UQ88 Q5QPR4 702 724 CDK11B;CDC2L1;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A no no 3 3.5312E-05 114.53 By matching By MS/MS 1 1 39158000 16918000 22240000 4882 333;2230 5560 12274;12275 11928 11928 588;6926 1 RHPTGTTPPVK SQNGCQIRRHPTGTTP TGTTPPVKKKPKLLNL R R H V K K 0 1 0 0 0 0 0 1 1 0 0 1 0 0 3 0 3 0 0 1 0 0 11 1 1189.6568 Q96ST3 Q96ST3 429 439 SIN3A Paired amphipathic helix protein Sin3a yes yes 3 0.026708 63.181 By MS/MS By matching 1 1 3266600 1796100 1470500 4883 2712 5561 12276;12277 11929 11929 1 RHSEVETDSK VGAGKRKRRHSEVETD SEVETDSKKKKMKLPE R R H S K K 0 1 0 1 0 0 2 0 1 0 0 1 0 0 0 2 1 0 0 1 0 0 10 1 1186.5578 Q9NX58 Q9NX58 274 283 LYAR Cell growth-regulating nucleolar protein yes yes 3 0.015191 53.403 By MS/MS 1 3773400 0 3773400 4884 2939 5562 12278 11930 11930 6195 1 RHSLEVMNSMVR KHHGTVNKRHSLEVMN EVMNSMVRGMEAMTLK K R H V R G 0 2 1 0 0 0 1 0 1 0 1 0 2 0 0 2 0 0 0 2 0 0 12 1 1457.7231 Q15678 Q15678 640 651 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 3 0.011167 54.812 By MS/MS 1 7027000 7027000 0 4885 2150 5563 12279 11931 11931 865;866 4270 1 RHSSDINHLVTQGRESPEGSYTDDANQEVR KTGGRGDRRHSSDINH DDANQEVRGPPQQHGH R R H V R G 1 3 2 3 0 2 3 2 2 1 1 0 0 0 1 4 2 0 1 2 0 0 30 2 3396.5679 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 332 361 FNBP1L Formin-binding protein 1-like yes no 4 0.0023239 51.783 By MS/MS By MS/MS 1 1 55582000 45436000 10146000 4886 12 5564 12280;12281 11932;11933 11932 22;23;24;6836 2 RHTVEDAVVSQGPEAAGPLSTPQEVSASR PGHRRMLRRHTVEDAV PQEVSASRS_______ R R H S R S 4 2 0 1 0 2 3 2 1 0 1 0 0 0 3 4 2 0 0 4 0 0 29 1 2974.4744 Q96NW4 Q96NW4 1021 1049 ANKRD27 Ankyrin repeat domain-containing protein 27 yes yes 3 0.00029419 65.223 By MS/MS By matching 1 1 18365000 8716000 9649300 4887 2691 5565 12282;12283 11934;11935 11935 5562 2 RIDFIPVSPAPSPTR VEKSASPKRIDFIPVS SPAPSPTRGIGKQCFS K R I T R G 1 2 0 1 0 0 0 0 0 2 0 0 0 1 4 2 1 0 0 1 0 0 15 1 1651.9046 Q96E09 Q96E09 136 150 FAM122A Protein FAM122A yes yes 2;3 1.3918E-06 128.79 By MS/MS By MS/MS 4 4 201730000 92318000 109410000 4888 2640 5566;5567 12284;12285;12286;12287;12288;12289;12290;12291 11936;11937;11938;11939;11940;11941;11942;11943 11943 5438;5439;7782 8 RIDFTPVSPAPSPTR PEKLYSPKRIDFTPVS SPAPSPTRGFGKMFVS K R I T R G 1 2 0 1 0 0 0 0 0 1 0 0 0 1 4 2 2 0 0 1 0 0 15 1 1639.8682 Q7Z309;G1UD79 Q7Z309 108 122 FAM122B;SPACIA2 Protein FAM122B yes no 2;3 1.8015E-42 183.71 By MS/MS By MS/MS 3 3 319800000 159280000 160520000 4889 2374 5568;5569 12292;12293;12294;12295;12296;12297 11944;11945;11946;11947;11948 11947 4819;4820;7687 5 RIDISPSTFR KKSPEIHRRIDISPST DISPSTFRKHGLAHDE R R I F R K 0 2 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 10 1 1190.6408 Q9Y2W1 Q9Y2W1 678 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 0.0003715 135.04 By MS/MS By MS/MS 2 2 412220000 219100000 193110000 4890 3096 5570 12298;12299;12300;12301 11949;11950;11951;11952;11953;11954 11954 6648;6649 6 RIDISPSTFRK KKSPEIHRRIDISPST ISPSTFRKHGLAHDEM R R I R K H 0 2 0 1 0 0 0 0 0 2 0 1 0 1 1 2 1 0 0 0 0 0 11 2 1318.7357 Q9Y2W1 Q9Y2W1 678 688 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.012837 72.209 By MS/MS By matching 1 1 22905000 10882000 12023000 4891 3096 5571 12302;12303 11955 11955 6648;6649 1 RIDISPSTLR QKSPEIHRRIDISPST DISPSTLRKHTRLAGE R R I L R K 0 2 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 10 1 1156.6564 Q9NYF8;E9PK91;E9PQN2;E9PKI6 Q9NYF8 654 663 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 0.00016268 130.19 By MS/MS By MS/MS 2 2 1238800000 670790000 567960000 4892 2947 5572 12304;12305;12306;12307 11956;11957;11958;11959;11960 11960 6215 5 RILSDVTHSAVFGVPASK KTQRAGHRRILSDVTH VFGVPASKSTQLLQAA R R I S K S 2 1 0 1 0 0 0 1 1 1 1 1 0 1 1 3 1 0 0 3 0 0 18 1 1883.0265 E9PG46;Q2M2I8 E9PG46 634 651 AAK1 AP2-associated protein kinase 1 yes no 3 5.5833E-05 98.572 By MS/MS By MS/MS 1 1 12366000 7134000 5231800 4893 869 5573 12308;12309 11961;11962 11962 1598 2 RIPSIVSSPLNSPLDR SSPLADAKRIPSIVSS PLNSPLDRSGIDITDF K R I D R S 0 2 1 1 0 0 0 0 0 2 2 0 0 0 3 4 0 0 0 1 0 0 16 1 1749.9737 P49790 P49790 327 342 NUP153 Nuclear pore complex protein Nup153 yes yes 2;3 6.0346E-31 163.68 By MS/MS By MS/MS 3 3 113120000 61145000 51974000 4894 1859 5574;5575 12310;12311;12312;12313;12314;12315 11963;11964;11965;11966;11967;11968 11968 3588;3589;3590 6 RIQDQLLPR ETRSVRKRRIQDQLLP IQDQLLPR________ R R I P R - 0 2 0 1 0 2 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 9 1 1137.6618 G3V3C2 G3V3C2 54 62 LRMP yes yes 3 0.0083698 56.432 By matching By MS/MS 1 1 26305000 11973000 14333000 4895 1074 5576 12316;12317 11969 11969 1 RIQPQPPDEDGDHSDKEDEQPQVVVLK EGPTVETKRIQPQPPD QPQVVVLKKGDLSVEE K R I L K K 0 1 0 5 0 4 3 1 1 1 1 2 0 0 4 1 0 0 0 3 0 0 27 2 3097.4952 Q96AT1 Q96AT1 37 63 KIAA1143 Uncharacterized protein KIAA1143 yes yes 4 0.003571 56.453 By MS/MS 1 28971000 28971000 0 4896 2622 5577 12318 11970 11970 5391 1 RISFSASHR RCQAQVSRRISFSASH ISFSASHRLYSKFLSD R R I H R L 1 2 0 0 0 0 0 0 1 1 0 0 0 1 0 3 0 0 0 0 0 0 9 1 1059.5574 E9PKY8;E9PJM0;Q03393 E9PKY8 17 25 PTS 6-pyruvoyl tetrahydrobiopterin synthase yes no 3 0.0045234 71.085 By MS/MS By MS/MS 1 1 16605000 9624100 6981200 4897 892 5578 12319;12320 11971;11972 11971 1671 2 RISGLIYEETR LARRGGVKRISGLIYE GLIYEETRGVLKVFLE K R I T R G 0 2 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 11 1 1335.7147 P62805 P62805 46 56 HIST1H4A Histone H4 yes yes 2 0.0026526 93.716 By MS/MS By MS/MS 1 1 45533000 25638000 19896000 4898 1945 5579 12321;12322 11973;11974 11973 3736 2 RISHSLYSGIEGLDESPSR TALDDRERRISHSLYS GLDESPSRNAALSRIM R R I S R N 0 2 0 1 0 0 2 2 1 2 2 0 0 0 1 5 0 0 1 0 0 0 19 1 2102.0392 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8;B1AP52 Q5VWV2 656 674 PARD3 Partitioning defective 3 homolog yes no 3 0.00044422 78.418 By MS/MS By MS/MS 1 1 21422000 11882000 9539700 4899 2278 5580 12323;12324 11975;11976 11975 4572;4573;4574;8371 2 RISLSDMPR VLSGGTGRRISLSDMP ISLSDMPRSPMSTNSS R R I P R S 0 2 0 1 0 0 0 0 0 1 1 0 1 0 1 2 0 0 0 0 0 0 9 1 1073.5652 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 350 358 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.01474 75.788 By MS/MS By MS/MS 1 2 36019000 14851000 21168000 4900 82 5581;5582 12325;12326;12327 11977;11978 11978 30 143 2 RISQSQPVR IIRNPQQRRISQSQPV ISQSQPVRGRDEEQDD R R I V R G 0 2 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 9 1 1069.5992 E7EMW7;O95071 E7EMW7 1541 1549 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.0055044 103.43 By MS/MS By MS/MS 1 1 92014000 57566000 34447000 4901 793 5583 12328;12329 11979;11980 11980 1411;1412 2 RISSSSVQPCSEEVSTPQDSLAQCK PGRPLYQRRISSSSVQ QDSLAQCKELQDHSNQ R R I C K E 1 1 0 1 2 3 2 0 0 1 1 1 0 0 2 7 1 0 0 2 0 0 25 1 2779.2753 J3QS41;P42694 J3QS41 1762 1786 HELZ Probable helicase with zinc finger domain yes no 3 0.00052978 73.868 By MS/MS By MS/MS 2 2 52903000 28118000 24786000 4902 1359 5584;5585 12330;12331;12332;12333 11981;11982;11983;11984 11982 2510;2511;2512;2513;2514 4 RKPEDVLDDDDAGSAPLK IIFIYEKRRKPEDVLD DAGSAPLKSSGQHQND R R K L K S 2 1 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 18 2 1939.9487 A0A087WUV8;P35613 A0A087WUV8 153 170 BSG Basigin yes no 3 0.0013002 90.762 By MS/MS By MS/MS 1 1 50220000 27838000 22382000 4903 63 5586 12334;12335 11985;11986;11987 11985 113 3 RKPSPEPEGEVGPPK AVARTARKRKPSPEPE EGEVGPPKINGEAQPW K R K P K I 0 1 0 0 0 0 3 2 0 0 0 2 0 0 5 1 0 0 0 1 0 0 15 2 1602.8366 Q7Z5L9 Q7Z5L9 357 371 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 6.7013E-11 142.35 By MS/MS By MS/MS 1 1 67401000 33927000 33474000 4904 2391 5587 12336;12337 11988;11989 11989 4866 2 RKPSVPDSASPADDSFVDPGER TLGIGKVKRKPSVPDS SFVDPGERLYDLNMPA K R K E R L 2 2 0 4 0 0 1 1 0 0 0 1 0 1 4 4 0 0 0 2 0 0 22 2 2328.0982 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333 C9K098 82 103 NCK1 Cytoplasmic protein NCK1 yes no 3 0.00016848 102.46 By MS/MS By MS/MS 1 1 32386000 16888000 15498000 4905 645 5588 12338;12339 11990;11991 11990 1203 2 RKSELPQDVYTIK KKEKVLLRRKSELPQD PQDVYTIKALEAHKRA R R K I K A 0 1 0 1 0 1 1 0 0 1 1 2 0 0 1 1 1 0 1 1 0 0 13 2 1575.8621 H0Y8C4;E9PFR3;Q14738 H0Y8C4 473 485 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes no 3 0.026525 62.658 By matching By MS/MS 1 1 24856000 13424000 11432000 4906 868 5589 12340;12341 11992 11992 1597 1 RKSFTSLYK TERKSTQKRKSFTSLY KSFTSLYKDRCSTGSP K R K Y K D 0 1 0 0 0 0 0 0 0 0 1 2 0 1 0 2 1 0 1 0 0 0 9 2 1128.6291 H0Y2V6;Q5SW79 H0Y2V6 920 928 CEP170 Centrosomal protein of 170 kDa yes no 3 0.020047 67.997 By matching By MS/MS 1 1 7630400 4402000 3228400 4907 1112 5590 12342;12343 11993 11993 2098 1 RKSLSDSESDDSK GKEKDGTKRKSLSDSE DSESDDSKSKKKRDAA K R K S K S 0 1 0 3 0 0 1 0 0 0 1 2 0 0 0 5 0 0 0 0 0 0 13 2 1452.6692 Q13185;S4R2Y4 Q13185 91 103 CBX3 Chromobox protein homolog 3 yes no 2 0.02632 78.917 By matching By MS/MS 1 1 28965000 3268000 25697000 4908 2048 5591 12344;12345 11994 11994 4018;4019;4020 1 RKSLVGTPYWMAPELISR QVSKEVPRRKSLVGTP MAPELISRLPYGPEVD R R K S R L 1 2 0 0 0 0 1 1 0 1 2 1 1 0 2 2 1 1 1 1 0 0 18 2 2103.1299 O96013;M0R1R1 O96013 472 489 PAK4 Serine/threonine-protein kinase PAK 4 yes no 3 0.001973 89.877 By MS/MS By MS/MS 2 2 86437000 46747000 39690000 4909 1617 5592;5593 12346;12347;12348;12349 11995;11996;11997;11998 11995 580 3063;7362 4 RKTSDANETEDHLESLICK DGGQPHKRRKTSDANE HLESLICKVGEKSACS R R K C K V 1 1 1 2 1 0 3 0 1 1 2 2 0 0 0 2 2 0 0 0 0 0 19 2 2245.0645 F2Z2T1;Q09161 F2Z2T1 19 37 NCBP1 Nuclear cap-binding protein subunit 1 yes no 4 0.0035399 69.069 By MS/MS By matching 1 1 93639000 47517000 46122000 4910 932 5594 12350;12351 11999 11999 1747;7124 1 RKTVSFSAIEVVPAPEPPPATPPQAK LLPPPKKRRKTVSFSA PATPPQAKFPGPASRK R R K A K F 4 1 0 0 0 1 2 0 0 1 0 2 0 1 7 2 2 0 0 3 0 0 26 2 2713.4803 O15047 O15047 1165 1190 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 3 0.012794 50.432 By MS/MS 1 14380000 0 14380000 4911 1468 5595 12352 12000 12000 2740;2741;7297 1 RKVMDSDEDDDY TTTVKFNRRKVMDSDE DSDEDDDY________ R R K D Y - 0 1 0 5 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 12 2 1486.5882 K7EQA1;O14737 K7EQA1 76 87 PDCD5 Programmed cell death protein 5 yes no 2 0.018294 50.108 By MS/MS By matching 1 1 48503000 24897000 23606000 4912 1390 5596 12353;12354 12001 12001 486 2559 0 RLASPLAPLSVIPSTSQTMAR SPPHSSSRRLASPLAP STSQTMARSSSQSQTT R R L A R S 3 2 0 0 0 1 0 0 0 1 3 0 1 0 3 4 2 0 0 1 0 0 21 1 2195.2096 A0A0G2JR58;H7BZI3;A0A0G2JSE4;H7BXN7;A0A0G2JQA9;A0A0G2JS42;A0A0G2JS91;E7EQG8;A0A0G2JR46 A0A0G2JR58 87 107 MUC4 yes no 2 0.02836 49.224 By MS/MS By matching 1 1 21641000 10578000 11063000 4913 362 5597 12355;12356 12002 12002 668;669 0 RLAVPTEVSTEVPEMDTST MGSYVPPRRLAVPTEV VPEMDTST________ R R L S T - 1 1 0 1 0 0 3 0 0 0 1 0 1 0 2 2 4 0 0 3 0 0 19 1 2060.9936 O00488 O00488 116 134 ZNF593 Zinc finger protein 593 yes yes 2 0.01101 61.815 By MS/MS By matching 1 1 28211000 12596000 15615000 4914 1438 5598 12357;12358 12003 12003 507 2640;7283 1 RLDSSCLESVK ESRNRVKRRLDSSCLE SSCLESVKQKCVKSCN R R L V K Q 0 1 0 1 1 0 1 0 0 0 2 1 0 0 0 3 0 0 0 1 0 0 11 1 1292.6395 F5GZ90;Q9NZJ0 F5GZ90 512 522 DTL Denticleless protein homolog yes no 2 1.6294E-05 134.4 By MS/MS By MS/MS 1 1 54149000 23991000 30157000 4915 952 5599 12359;12360 12004;12005 12005 1791 2 RLFDDEASVDEPR PFTLVCCRRLFDDEAS EASVDEPRRTETSLPE R R L P R R 1 2 0 3 0 0 2 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 13 1 1547.7216 Q8NI35;A0A0U1RR46;A0A0X1KG69;A0A087WUZ6 Q8NI35 638 650 INADL InaD-like protein yes no 2 0.011032 75.316 By MS/MS By matching 1 1 28845000 13625000 15219000 4916 2528 5600 12361;12362 12006 12006 5164 1 RLKSSTSFANIQENSN KRKLILPKRLKSSTSF ANIQENSN________ K R L S N - 1 1 3 0 0 1 1 0 0 1 1 1 0 1 0 4 1 0 0 0 0 0 16 2 1794.886 Q86WC4 Q86WC4 319 334 OSTM1 Osteopetrosis-associated transmembrane protein 1 yes yes 2 0.013747 86.222 By matching By MS/MS 1 1 25488000 10848000 14640000 4917 2411 5601 12363;12364 12007 12007 4915;4916;4917;7700 1 RLPQDHADSCVVSSDDEELSR RRPRRNARRLPQDHAD SDDEELSRDRDVYVTT R R L S R D 1 2 0 4 1 1 2 0 1 0 2 0 0 0 1 4 0 0 0 2 0 0 21 1 2414.0768 D6RA71;P78317 D6RA71 82 102 RNF4 E3 ubiquitin-protein ligase RNF4 yes no 3 0.00050095 82.541 By MS/MS By MS/MS 1 1 37170000 15162000 22008000 4918 737 5602 12365;12366 12008;12009 12009 1335;1336;1337 1 RLPSKELPDSSSPVPANNIR TIDTSRKKRLPSKELP PVPANNIRVIKNSIRL K R L I R V 1 2 2 1 0 0 1 0 0 1 2 1 0 0 4 4 0 0 0 1 0 0 20 2 2176.16 Q9BWT3;A0A0C4DH56 Q9BWT3 705 724 PAPOLG Poly(A) polymerase gamma yes no 3 0.0034547 72.271 By MS/MS By matching 1 1 27205000 18608000 8597300 4919 2768 5603 12367;12368 12010 12010 5758 1 RLSAQGQAISVVGSLSSMSPLEEEAPQAK TESVLIKRRLSAQGQA EEEAPQAKRRPEPIIP R R L A K R 4 1 0 0 0 3 3 2 0 1 3 1 1 0 2 6 0 0 0 2 0 0 29 1 2969.5128 Q92797;M0R3C7;A0A087WUE9 Q92797 492 520 SYMPK Symplekin yes no 3 2.257E-101 200.3 By MS/MS By MS/MS 2 2 224420000 118730000 105690000 4920 2603 5604 12369;12370;12371;12372 12011;12012;12013;12014;12015 12013 1042 5351;5352 5 RLSCSELSLYQPLQNSSK SVQAEILKRLSCSELS QPLQNSSKEKNDKASW K R L S K E 0 1 1 0 1 2 1 0 0 0 4 1 0 0 1 5 0 0 1 0 0 0 18 1 2109.0525 Q12923 Q12923 934 951 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 3 0.0027041 88.781 By MS/MS 1 0 0 0 4921 2034 5605 12373 12016 12016 3984;8326 1 RLSDCESTDVK PKSQKNRRRLSDCEST DCESTDVKRAGSHTAQ R R L V K R 0 1 0 2 1 0 1 0 0 0 1 1 0 0 0 2 1 0 0 1 0 0 11 1 1308.598 Q7Z333 Q7Z333 1364 1374 SETX Probable helicase senataxin yes yes 2 0.012357 74.537 By matching By MS/MS 1 1 9310600 6047900 3262700 4922 2375 5606 12374;12375 12017 12017 4823 1 RLSEQLAHTPTAFK IAAGDIRRRLSEQLAH AHTPTAFKRDPEDPSA R R L F K R 2 1 0 0 0 1 1 0 1 0 2 1 0 1 1 1 2 0 0 0 0 0 14 1 1597.8576 A0A0B4J1S8;Q9UBF8;F8W860 A0A0B4J1S8 521 534 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 0.0032298 71.872 By MS/MS By matching 1 1 32934000 19929000 13005000 4923 287 5607 12376;12377 12018 12018 510 1 RLSESQLSFR LAELSDYRRLSESQLS SESQLSFRRSPTKSSL R R L F R R 0 2 0 0 0 1 1 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 10 1 1221.6466 Q96PK6 Q96PK6 616 625 RBM14 RNA-binding protein 14 yes yes 3 0.0033499 89.46 By MS/MS 1 0 0 0 4924 2696 5608 12378 12019 12019 5566 1 RLSESSALK SPPGAKRRRLSESSAL LSESSALKQPATPTAA R R L L K Q 1 1 0 0 0 0 1 0 0 0 2 1 0 0 0 3 0 0 0 0 0 0 9 1 989.55056 Q96S55 Q96S55 73 81 WRNIP1 ATPase WRNIP1 yes yes 2 0.0067581 86.014 By MS/MS By MS/MS 1 1 197200000 109280000 87919000 4925 2708 5609 12379;12380 12020;12021 12020 5589 2 RLSFAVPFR YVAWDREKRLSFAVPF LSFAVPFREMKPVIFL K R L F R E 1 2 0 0 0 0 0 0 0 0 1 0 0 2 1 1 0 0 0 1 0 0 9 1 1091.624 P78527 P78527 891 899 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0078181 84.479 By MS/MS By MS/MS 1 1 2610400 2610400 0 4926 1964 5610 12381;12382 12022;12023 12022 3753 2 RLSLDSSCLDSSR SSGGLQSKRLSLDSSC SSCLDSSRDTDNGTPF K R L S R D 0 2 0 2 1 0 0 0 0 0 3 0 0 0 0 5 0 0 0 0 0 0 13 1 1494.7097 Q9BWT3;A0A0C4DH56 Q9BWT3 523 535 PAPOLG Poly(A) polymerase gamma yes no 2;3 0.0032204 83.633 By MS/MS By MS/MS 2 2 54644000 24110000 30533000 4927 2768 5611 12383;12384;12385;12386 12024;12025;12026;12027 12024 5759;5760 4 RLSLPADIR ISTEDINKRLSLPADI LSLPADIRLPEGYLEK K R L I R L 1 2 0 1 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 9 1 1039.6138 E5RJM2;E5RGN0;A0A087WZU2;Q00536;E5RIY8;E5RIU4;H0YBX5;F8VZY6;F5H6Z0;Q00537;F8VQZ9 E5RJM2 117 125 CDK16;CDK17 Cyclin-dependent kinase 16;Cyclin-dependent kinase 17 no no 2 0.0034739 127.56 By MS/MS By MS/MS 1 1 94603000 49717000 44885000 4928 146;985 5612 12387;12388 12028;12029 12028 239 2 RLSNLPTVDPIAVCHELYNTIR PGPSRKRRRLSNLPTV HELYNTIRDYKDEQGR R R L I R D 1 2 2 1 1 0 1 0 1 2 3 0 0 0 2 1 2 0 1 2 0 0 22 1 2580.3482 E7EVG2;Q86U86;C9JCJ2;C9J053;C9JQF1;C9JPI5 E7EVG2 37 58 PBRM1 Protein polybromo-1 yes no 3 3.9645E-05 114.19 By MS/MS 1 32869000 0 32869000 4929 829 5613 12389 12030 12030 1547 1 RLSNVSLTGVSTIR NCSGVRRRRLSNVSLT LTGVSTIRTSSAELST R R L I R T 0 2 1 0 0 0 0 1 0 1 2 0 0 0 0 3 2 0 0 2 0 0 14 1 1501.8576 Q15139;F8WBA3 Q15139 203 216 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 2;3 0.00029986 101.54 By MS/MS By MS/MS 3 2 49327000 27394000 21932000 4930 2129 5614;5615 12390;12391;12392;12393;12394 12031;12032;12033;12034 12031 4207;4208 4 RLSPPSSSAASSYSFSDLNSTR FEYETQRRRLSPPSSS FSDLNSTRGDADMYDL R R L T R G 2 2 1 1 0 0 0 0 0 0 2 0 0 1 2 9 1 0 1 0 0 0 22 1 2316.0982 P50402 P50402 47 68 EMD Emerin yes yes 3 1.0129E-13 144.3 By MS/MS By MS/MS 2 3 137130000 70268000 66865000 4931 1867 5616;5617 12395;12396;12397;12398;12399 12035;12036;12037;12038;12039;12040;12041;12042 12039 3625;3626;3627;8291 8 RLSPSASPPR SSPPRKTRRLSPSASP SPSASPPRRRHRPSPP R R L P R R 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 0 0 0 10 1 1066.5883 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 382 391 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.0042206 79.283 By MS/MS By MS/MS 2 3 307540000 75762000 231780000 4932 511 5618;5619 12400;12401;12402;12403;12404 12043;12044;12045;12046;12047;12048;12049;12050;12051;12052 12050 952;953;954 10 RLSQPESAEK SSSSVQARRLSQPESA SQPESAEKHVTQRLQP R R L E K H 1 1 0 0 0 1 2 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1143.5884 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 650 659 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 0.00044571 126.5 By MS/MS By MS/MS 3 2 248900000 145920000 102980000 4933 810 5620 12405;12406;12407;12408;12409 12053;12054;12055;12056;12057 12055 1454 5 RLSQSDEDVIR GSSLKKKKRLSQSDED QSDEDVIRLIGQHLNG K R L I R L 0 2 0 2 0 1 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 11 1 1316.6684 H0Y917;Q9H7D7 H0Y917 111 121 WDR26 WD repeat-containing protein 26 yes no 2;3 0.02829 63.292 By MS/MS By MS/MS 1 1 37052000 0 37052000 4934 1150 5621 12410;12411 12058;12059 12059 2186 2 RLSSASTGKPPLSVEDDFEK SQMSMKTRRLSSASTG SVEDDFEKLIWEISGG R R L E K L 1 1 0 2 0 0 2 1 0 0 2 2 0 1 2 4 1 0 0 1 0 0 20 2 2162.0855 O75152;A0A1B0GTU1;A0A1B0GUI2 O75152 756 775 ZC3H11A Zinc finger CCCH domain-containing protein 11A no no 2;3 0.00085521 99.069 By MS/MS By MS/MS 3 3 200030000 94643000 105390000 4935 1538;413 5622;5623 12412;12413;12414;12415;12416;12417 12060;12061;12062;12063;12064 12063 760;761;762;6950 5 RLSSLRASTSK QEQIAKRRRLSSLRAS SLRASTSKSESSQK__ R R L S K S 1 2 0 0 0 0 0 0 0 0 2 1 0 0 0 4 1 0 0 0 0 0 11 2 1204.6888 P62753;A2A3R5 P62753 233 243 RPS6 40S ribosomal protein S6 yes no 2 0.0094544 89.466 By MS/MS 1 277150000 0 277150000 4936 1944 5624 12418 12065 12065 3733;3734;3735 1 RLSSSESPQRDPPPPPPPPPLLR EGPPAKTRRLSSSESP PPPPPLLRLPLPPPQQ R R L L R L 0 3 0 1 0 1 1 0 0 0 3 0 0 0 10 4 0 0 0 0 0 0 23 2 2516.35 J3KS33;Q9H2G4 J3KS33 14 36 TSPYL2 Testis-specific Y-encoded-like protein 2 yes no 3 0.010626 63.372 By matching By MS/MS 1 1 12642000 7400400 5241800 4937 1336 5625 12419;12420 12066 12066 2475;2476 0 RLSTHSPFR PRPSEWDKRLSTHSPF LSTHSPFRTLNINGQI K R L F R T 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 9 1 1099.5887 A0A1B0GWG0;P11171;Q4VB86 P11171 707 715 EPB41 Protein 4.1 no no 3 0.0076508 61.48 By MS/MS By MS/MS 1 1 16836000 10101000 6734800 4938 1681;434 5626 12421;12422 12067;12068 12067 812;3167;6959;7386 2 RLSTSPDVIQGHQPR RAQQQSQRRLSTSPDV VIQGHQPRDNHTDHGG R R L P R D 0 2 0 1 0 2 0 1 1 1 1 0 0 0 2 2 1 0 0 1 0 0 15 1 1689.8911 Q9Y385 Q9Y385 264 278 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 3 1.0503E-07 131.31 By MS/MS By MS/MS 1 1 110650000 60735000 49919000 4939 3104 5627 12423;12424 12069;12070 12069 6662 2 RMASPPAPSPAPPAISPIIK RRVGAPPRRMASPPAP PAISPIIKNAISLPQL R R M I K N 4 1 0 0 0 0 0 0 0 3 0 1 1 0 7 3 0 0 0 0 0 0 20 1 1997.1132 Q00587 Q00587 98 117 CDC42EP1 Cdc42 effector protein 1 yes yes 3 0.029506 44.641 By MS/MS 1 0 0 0 4940 1974 5628 12425 12071 12071 778 3782 1 RMCASYSELELVTSAK LEQIDLIRRMCASYSE LELVTSAKALNDTQKL R R M A K A 2 1 0 0 1 0 2 0 0 0 2 1 1 0 0 3 1 0 1 1 0 0 16 1 1843.8808 J3QLL2;B3KS59;Q9H4A9 J3QLL2 42 57 DPEP2 Dipeptidase;Dipeptidase 2 yes no 2 0.026064 44.734 By MS/MS 1 3753900 0 3753900 4941 541 5629 12426 12072 12072 213 0 RMPCAEDYLSVVLNQLCVLHEK CCKHPEAKRMPCAEDY QLCVLHEKTPVSDRVT K R M E K T 1 1 1 1 2 1 2 0 1 0 4 1 1 0 1 1 0 0 1 3 0 0 22 1 2673.3077 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;H0YA55;D6RHD5;A0A087WWT3 B7WNR0 354 375 ALB Serum albumin yes no 3 0.005003 69.581 By MS/MS 1 4018300 4018300 0 + 4942 314 5630 12427 12073 12073 0 RMSDEFVDSFK QRYGRELRRMSDEFVD DEFVDSFKKGLPRPKS R R M F K K 0 1 0 2 0 0 1 0 0 0 0 1 1 2 0 2 0 0 0 1 0 0 11 1 1359.6129 Q92934;F5H3B1;F5H1R6 Q92934 116 126 BAD Bcl2-associated agonist of cell death yes no 2 0.0023429 86.898 By MS/MS By MS/MS 1 1 24277000 10760000 13517000 4943 2612 5631 12428;12429 12074;12075;12076 12076 1046 5366 3 RMSDEFVDSFKK QRYGRELRRMSDEFVD EFVDSFKKGLPRPKSA R R M K K G 0 1 0 2 0 0 1 0 0 0 0 2 1 2 0 2 0 0 0 1 0 0 12 2 1487.7079 Q92934;F5H3B1;F5H1R6 Q92934 116 127 BAD Bcl2-associated agonist of cell death yes no 3 0.00017835 119.96 By MS/MS By MS/MS 1 1 13780000 7010600 6769500 4944 2612 5632 12430;12431 12077;12078 12077 5366 2 RMSGEPIQTVESIR GYHSASNRRMSGEPIQ IQTVESIRVPGKGNRG R R M I R V 0 2 0 0 0 1 2 1 0 2 0 0 1 0 1 2 1 0 0 1 0 0 14 1 1601.8195 Q5VT52 Q5VT52 1097 1110 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.023034 56.46 By MS/MS By matching 1 1 12632000 5650100 6981800 4945 2264 5633 12432;12433 12079 12079 908 4542 0 RMSGEPIQTVESIRVPGK GYHSASNRRMSGEPIQ ESIRVPGKGNRGHGRE R R M G K G 0 2 0 0 0 1 2 2 0 2 0 1 1 0 2 2 1 0 0 2 0 0 18 2 1983.0571 Q5VT52 Q5VT52 1097 1114 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.0071028 72.489 By MS/MS 1 5535500 5535500 0 4946 2264 5634 12434 12080 12080 908 4542 1 RMSPKPELTEEQK MASSSQRKRMSPKPEL PELTEEQKQEIREAFD K R M Q K Q 0 1 0 0 0 1 3 0 0 0 1 2 1 0 2 1 1 0 0 0 0 0 13 2 1571.7977 P41208 P41208 18 30 CETN2 Centrin-2 yes yes 3 0.025887 62.104 By MS/MS 1 2626600 2626600 0 4947 1817 5635 12435 12081 12081 3424 0 RNDDISELEDLSELEDLKDAK QGLPTMARRNDDISEL LEDLKDAKLQTLKELF R R N A K L 1 1 1 5 0 0 4 0 0 1 4 2 0 0 0 2 0 0 0 0 0 0 21 2 2446.1711 D6RAY8;Q9H4L7 D6RAY8 141 161 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 0.00018736 115.06 By MS/MS By MS/MS 2 2 48799000 27808000 20991000 4948 747 5636 12436;12437;12438;12439 12082;12083;12084;12085 12085 1359;1360 4 RNEGVVGGEDYEEVDR SYAPRHSRRNEGVVGG EDYEEVDRYSRQGRVA R R N D R Y 0 2 1 2 0 0 4 3 0 0 0 0 0 0 0 0 0 0 1 3 0 0 16 1 1821.8129 H3BQQ2;Q86UK7 H3BQQ2 241 256 ZNF598 Zinc finger protein 598 yes no 2;3 4.7599E-23 154.13 By MS/MS By MS/MS 2 2 104820000 58636000 46189000 4949 1243 5637 12440;12441;12442;12443 12086;12087;12088;12089 12089 8160 4 RNEGVVGGEDYEEVDRYSR SYAPRHSRRNEGVVGG EEVDRYSRQGRVARAG R R N S R Q 0 3 1 2 0 0 4 3 0 0 0 0 0 0 0 1 0 0 2 3 0 0 19 2 2228.0094 H3BQQ2;Q86UK7 H3BQQ2 241 259 ZNF598 Zinc finger protein 598 yes no 3 0.00042112 80.459 By MS/MS 1 23420000 23420000 0 4950 1243 5638 12444 12090 12090 8160 1 RNSCNVGGGGGGFK PGGGGGKRRNSCNVGG GGGGGGFKHPAFKRRR R R N F K H 0 1 2 0 1 0 0 6 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1365.6208 Q7L2J0 Q7L2J0 150 163 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 6.7875E-11 140.49 By MS/MS By MS/MS 1 1 50032000 26274000 23758000 4951 2364 5639 12445;12446 12091;12092 12091 4792 2 RNSFSENEK PKKKRGERRNSFSENE NSFSENEKHTHRIKDS R R N E K H 0 1 2 0 0 0 2 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 9 1 1109.5102 Q9HCG8 Q9HCG8 827 835 CWC22 Pre-mRNA-splicing factor CWC22 homolog yes yes 2 0.017647 72.731 By matching By MS/MS 1 2 10787000 2394200 8392600 4952 2875 5640 12447;12448;12449 12093;12094 12093 6055 2 RNSFTPLSSSNTIR NQTPVRMRRNSFTPLS LSSSNTIRRPRNYSVG R R N I R R 0 2 2 0 0 0 0 0 0 1 1 0 0 1 1 4 2 0 0 0 0 0 14 1 1578.8114 O60825 O60825 464 477 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 2;3 0.00039573 91.712 By MS/MS By MS/MS 2 2 94793000 49162000 45632000 4953 1529 5641 12450;12451;12452;12453 12095;12096;12097;12098 12098 2885 4 RNSIEVAGLSHGLEGLR ARHAQLHKRNSIEVAG SHGLEGLRLKERTLSA K R N L R L 1 2 1 0 0 0 2 3 1 1 3 0 0 0 0 2 0 0 0 1 0 0 17 1 1806.97 Q16825 Q16825 635 651 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 yes yes 3 0.0011292 77.13 By MS/MS By MS/MS 1 1 6656200 3093300 3562900 4954 2168 5642 12454;12455 12099;12100 12099 4316 2 RNSLEGYSR SPSKSSDRRNSLEGYS NSLEGYSRSVRSRSGE R R N S R S 0 2 1 0 0 0 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 9 1 1080.5312 Q8NDT2 Q8NDT2 560 568 RBM15B Putative RNA-binding protein 15B yes yes 2 0.030602 62.799 By MS/MS By MS/MS 1 2 32388000 14306000 18082000 4955 2510 5643 12456;12457;12458 12101;12102 12102 2 RNSLTGEEGQLAR PRRAGALRRNSLTGEE GEEGQLARVSNWPLYC R R N A R V 1 2 1 0 0 1 2 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 13 1 1429.7274 Q9BX95 Q9BX95 110 122 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 2;3 0.00063411 115.04 By MS/MS By MS/MS 2 2 222260000 124480000 97786000 4956 2770 5644 12459;12460;12461;12462 12103;12104;12105;12106 12103 5763;7833 4 RNSNSPPSPSSMNQRR NQVHSTTRRNSNSPPS PSSMNQRRLGPREVGG R R N R R L 0 3 3 0 0 1 0 0 0 0 0 0 1 0 3 5 0 0 0 0 0 0 16 2 1813.8602 Q7Z5L9 Q7Z5L9 453 468 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.029489 48.371 By MS/MS 1 0 0 0 4957 2391 5645 12463 12107 12107 966 4868;4869 1 RNSSEASSGDFLDLK LESSGLQRRNSSEASS SGDFLDLKGEGDIHEN R R N L K G 1 1 1 2 0 0 1 1 0 0 2 1 0 1 0 4 0 0 0 0 0 0 15 1 1624.7693 Q9UK76;J3KSH8;J3KT51 Q9UK76 85 99 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 2;3 9.973E-12 143.28 By MS/MS By MS/MS 4 4 2009800000 1014900000 994850000 4958 3020 5646;5647;5648 12464;12465;12466;12467;12468;12469;12470;12471 12108;12109;12110;12111;12112;12113;12114;12115;12116;12117 12111 140 6361;6362 10 RNSSSPVSPASVPGQR HSTTASARRNSSSPVS PASVPGQRRLASRNGD R R N Q R R 1 2 1 0 0 1 0 1 0 0 0 0 0 0 3 5 0 0 0 2 0 0 16 1 1624.8281 Q9H1B7 Q9H1B7 655 670 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 2 0.0018306 72.489 By MS/MS By MS/MS 1 1 35258000 17677000 17581000 4959 2815 5649 12472;12473 12118;12119 12118 5886;5887;5888;5889 2 RNSVERPAEPVAGAATPSLVEQQK NRMCADVRRNSVERPA PSLVEQQKMLEELNKQ R R N Q K M 4 2 1 0 0 2 3 1 0 0 1 1 0 0 3 2 1 0 0 3 0 0 24 2 2533.3249 Q9BTC0 Q9BTC0 1454 1477 DIDO1 Death-inducer obliterator 1 yes yes 3 0.0067243 61.16 By MS/MS By matching 1 1 63832000 61932000 1900400 4960 2747 5650 12474;12475 12120 12120 5709 1 RNSVTPLASPEPTK KGPNPLMRRNSVTPLA LASPEPTKKPRINSFE R R N T K K 1 1 1 0 0 0 1 0 0 0 1 1 0 0 3 2 2 0 0 1 0 0 14 1 1495.7995 Q9H178;Q5W015;Q5VX20;Q16875 Q9H178 28 41 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes no 2 0.002704 93.342 By MS/MS By MS/MS 2 2 44959000 22544000 22416000 4961 2170 5651;5652 12476;12477;12478;12479 12121;12122;12123 12122 4318;4319;7615 3 RNYNDPEDRVK YPILDGLKRNYNDPED NDPEDRVKFRSKQNVD K R N V K F 0 2 2 2 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 11 2 1404.6746 F8VWY2;Q9UBM8 F8VWY2 187 197 MGAT4C Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C yes no 2 0.012813 61.65 By MS/MS 1 0 0 0 4962 1022 5653 12480 12124 12124 8140 1 RPAAAAAAGSASPR PGRKGSGKRPAAAAAA AAGSASPRSWDEAEAQ K R P P R S 7 2 0 0 0 0 0 1 0 0 0 0 0 0 2 2 0 0 0 0 0 0 14 1 1252.6636 Q96S55 Q96S55 142 155 WRNIP1 ATPase WRNIP1 yes yes 2 0.0014525 110.57 By MS/MS By MS/MS 1 1 62053000 30799000 31254000 4963 2708 5654 12481;12482 12125;12126 12126 5588 2 RPAEATSSPTSPERPR KKKDKEHRRPAEATSS PTSPERPRHHHHDSDS R R P P R H 2 3 0 0 0 0 2 0 0 0 0 0 0 0 4 3 2 0 0 0 0 0 16 2 1737.8758 Q9BU76 Q9BU76 210 225 MMTAG2 Multiple myeloma tumor-associated protein 2 yes yes 2;3 0.0016475 81.316 By MS/MS By MS/MS 2 2 168190000 72131000 96058000 4964 2753 5655 12483;12484;12485;12486 12127;12128;12129 12129 5726;5727;7826 3 RPAERSSPGQTPEEGAQALAEFAALHGPALR EAERGPERRPAERSSP ALHGPALRASGVPERY R R P L R A 7 3 0 0 0 2 4 3 1 0 3 0 0 1 4 2 1 0 0 0 0 0 31 2 3213.6279 Q14166 Q14166 10 40 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 4 0.027363 40.931 By MS/MS By matching 1 1 26524000 13434000 13090000 4965 2086 5656 12487;12488 12130 12130 4117;4118 1 RPAPAVSPGSWKPGPPGSPR PAVSPEPRRPAPAVSP PGPPGSPRPWKSNPSA R R P P R P 2 2 0 0 0 0 0 3 0 0 0 1 0 0 7 3 0 1 0 1 0 0 20 2 1997.0595 Q96JM3 Q96JM3 302 321 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.026171 51.535 By MS/MS By matching 1 1 30363000 11937000 18427000 4966 2674 5657 12489;12490 12131 12131 5524;5525 0 RPASPSSPEHLPATPAESPAQR LNKLKSPKRPASPSSP PAESPAQRFEARIEDG K R P Q R F 4 2 0 0 0 1 2 0 1 0 1 0 0 0 6 4 1 0 0 0 0 0 22 1 2282.1404 Q9H7L9 Q9H7L9 231 252 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 3 4.2135E-05 96.41 By MS/MS By MS/MS 2 1 144610000 78923000 65688000 4967 2848 5658;5659 12491;12492;12493 12132;12133;12134 12134 5989;5990;5991 3 RPASVSSSAAVEHEQR PTDLGAHKRPASVSSS AAVEHEQREAAAKEKQ K R P Q R E 3 2 0 0 0 1 2 0 1 0 0 0 0 0 1 4 0 0 0 2 0 0 16 1 1709.8445 Q7Z5L9 Q7Z5L9 237 252 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2;3 0.00012149 106.89 By MS/MS By MS/MS 2 2 104430000 66553000 37880000 4968 2391 5660 12494;12495;12496;12497 12135;12136;12137 12135 4870;4871 3 RPATADSPKPSAK PPPRASSKRPATADSP DSPKPSAKKQKKSSSK K R P A K K 3 1 0 1 0 0 0 0 0 0 0 2 0 0 3 2 1 0 0 0 0 0 13 2 1324.7099 Q03111 Q03111 286 298 MLLT1 Protein ENL yes yes 2 0.010325 81.017 By MS/MS By matching 1 1 6251000 4718800 1532200 4969 1992 5661 12498;12499 12138 12138 3833 1 RPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYR YEPEPLGKRPAVLPLL EEEDELYRQSLEIISR K R P Y R Q 2 2 2 2 0 0 7 3 0 0 6 0 0 0 6 4 3 0 1 2 0 0 40 1 4278.0816 Q07820 Q07820 137 176 MCL1 Induced myeloid leukemia cell differentiation protein Mcl-1 yes yes 3 0.011264 48.663 By MS/MS 1 12140000 0 12140000 4970 2011 5662 12500 12139 12139 7528 1 RPDDVPLSLSPSKR RARLAALKRPDDVPLS LSLSPSKRACASPSAQ K R P K R A 0 2 0 2 0 0 0 0 0 0 2 1 0 0 3 3 0 0 0 1 0 0 14 2 1565.8526 F8WDB4;Q9UFC0 F8WDB4 82 95 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 0.019062 66.702 By MS/MS 1 18833000 0 18833000 4971 1053 5663 12501 12140 12140 1993 1 RPDPDSDEDEDYER HEASGFARRPDPDSDE DEDEDYERERRKRSMG R R P E R E 0 2 0 5 0 0 3 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 14 1 1736.6762 H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010 H0Y6J6 57 70 RBM17 Splicing factor 45 yes no 2;3 0.00032021 117.07 By MS/MS By MS/MS 2 2 177330000 99375000 77952000 4972 1134 5664 12502;12503;12504;12505 12141;12142;12143;12144;12145;12146 12145 2157 6 RPDYAPMESSDEEDEEFQFIKK VKRYVSGKRPDYAPME EEFQFIKKAKEQEAEP K R P K K A 1 1 0 3 0 1 5 0 0 1 0 2 1 2 2 2 0 0 1 0 0 0 22 2 2689.1854 P55081 P55081 44 65 MFAP1 Microfibrillar-associated protein 1 yes yes 3 0.00024559 90.017 By MS/MS By MS/MS 1 1 59112000 0 59112000 4973 1909 5665 12506;12507 12147;12148 12148 742 3692;3693 2 RPEGPGAQAPSSPR LTDSGPERRPEGPGAQ AQAPSSPRVTEAPCYP R R P P R V 2 2 0 0 0 1 1 2 0 0 0 0 0 0 4 2 0 0 0 0 0 0 14 1 1405.7062 P40222 P40222 504 517 TXLNA Alpha-taxilin yes yes 2;3 0.00044082 110.57 By MS/MS By MS/MS 2 2 616050000 234470000 381580000 4974 1810 5666 12508;12509;12510;12511 12149;12150;12151 12151 3416 3 RPESPSEISPIK TWNSQFGKRPESPSEI PSEISPIKGSVRTGLF K R P I K G 0 1 0 0 0 0 2 0 0 2 0 1 0 0 3 3 0 0 0 0 0 0 12 1 1338.7143 Q7Z5K2 Q7Z5K2 218 229 WAPAL Wings apart-like protein homolog yes yes 2 3.1125E-14 159.66 By MS/MS By MS/MS 2 2 93979000 38460000 55519000 4975 2390 5667;5668 12512;12513;12514;12515 12152;12153;12154;12155 12154 4860;4861;4862 4 RPESPSEISPIKGSVR TWNSQFGKRPESPSEI SPIKGSVRTGLFEWDN K R P V R T 0 2 0 0 0 0 2 1 0 2 0 1 0 0 3 4 0 0 0 1 0 0 16 2 1737.9373 Q7Z5K2 Q7Z5K2 218 233 WAPAL Wings apart-like protein homolog yes yes 2;3 0.0001467 123.58 By MS/MS By MS/MS 2 2 205080000 108000000 97076000 4976 2390 5669 12516;12517;12518;12519 12156;12157 12156 4860;4861;4862 2 RPGNSTVTSSPPVTPK DKAIKTPKRPGNSTVT SSPPVTPKKLFTSPLC K R P P K K 0 1 1 0 0 0 0 1 0 0 0 1 0 0 4 3 3 0 0 2 0 0 16 1 1623.858 Q7Z2Z1 Q7Z2Z1 1294 1309 TICRR Treslin yes yes 2 0.0038874 75.017 By MS/MS By MS/MS 1 1 12012000 6268300 5743400 4977 2373 5670 12520;12521 12158;12159 12159 4811;7684;7685 2 RPGPGTLYDVPR YDVPPGLRRPGPGTLY GTLYDVPRERVLPPEV R R P P R E 0 2 0 1 0 0 0 2 0 0 1 0 0 0 3 0 1 0 1 1 0 0 12 1 1326.7044 P56945;H3BN62 P56945 380 391 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 2;3 1.5143E-05 124.12 By MS/MS By MS/MS 2 2 56775000 28195000 28580000 4978 1919 5671 12522;12523;12524;12525 12160;12161;12162;12163 12161 7496;8306 4 RPGQSFHVNSEVNSVLSPR SQPIMVQRRPGQSFHV VNSVLSPRSESGGLGV R R P P R S 0 2 2 0 0 1 1 1 1 0 1 0 0 1 2 4 0 0 0 3 0 0 19 1 2109.0715 Q5T1Z4;Q5T1Z8;Q14671;H0YEH2 Q5T1Z4 193 211 PUM1 Pumilio homolog 1 yes no 3 9.231E-05 96.128 By MS/MS By MS/MS 1 1 21581000 17813000 3768000 4979 2096 5672 12526;12527 12164;12165;12166 12164 4132;4133 3 RPGVSEAASGSQEKLDFNR GNGSPEPKRPGVSEAA QEKLDFNRNLKEVVPA K R P N R N 2 2 1 1 0 1 2 2 0 0 1 1 0 1 1 3 0 0 0 1 0 0 19 2 2047.0083 Q9UN79;E9PPW0 Q9UN79 88 106 SOX13 Transcription factor SOX-13 yes no 2 0.020584 45.79 By matching By MS/MS 1 1 10844000 4996300 5848100 4980 3057 5673 12528;12529 12167 12167 1 RPHFPQFSYSASGRE MDCMDNERRPHFPQFS SYSASGRE________ R R P R E - 1 2 0 0 0 1 1 1 1 0 0 0 0 2 2 3 0 0 1 0 0 0 15 2 1764.8332 Q9Y243 Q9Y243 465 479 AKT3 RAC-gamma serine/threonine-protein kinase yes yes 3 0.0023585 79.462 By MS/MS By MS/MS 1 1 16713000 8380600 8332200 4981 3084 5674 12530;12531 12168;12169;12170 12170 6624;6625 3 RPILQLSPPGPR KSRAVPGRRPILQLSP QLSPPGPRGSTPGRDP R R P P R G 0 2 0 0 0 1 0 1 0 1 2 0 0 0 4 1 0 0 0 0 0 0 12 1 1329.7881 Q8N3X1;F5GXL1 Q8N3X1 12 23 FNBP4 Formin-binding protein 4 yes no 3 0.00058385 88.108 By MS/MS By MS/MS 2 2 28086000 16659000 11427000 4982 2469 5675 12532;12533;12534;12535 12171;12172;12173;12174;12175 12172 5049 5 RPKEEEWDPEYTPK NSNTTFQKRPKEEEWD WDPEYTPKSKKYFLHD K R P P K S 0 1 0 1 0 0 4 0 0 0 0 2 0 0 3 0 1 1 1 0 0 0 14 2 1802.8475 Q9NYF8;H0YF14 Q9NYF8 829 842 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0068393 74.769 By MS/MS 1 0 0 0 4983 2947 5676 12536 12176 12176 7887 1 RPLLAGTTCTASGPEPEPLPEDGALMDKPVPLSPGLQHPVK LTLQTPAKRPLLAGTT PGLQHPVKASGCSWAP K R P V K A 3 1 0 2 1 1 3 4 1 0 6 2 1 0 9 2 3 0 0 2 0 0 41 2 4272.1923 Q6B0I6 Q6B0I6 473 513 KDM4D Lysine-specific demethylase 4D yes yes 4 0.00035448 52.335 By MS/MS 1 6868400 0 6868400 4984 2300 5677 12537 12177 12177 921 4633 1 RPLPVESPDTQR SVIVQPGKRPLPVESP VESPDTQRKRRIHRCD K R P Q R K 0 2 0 1 0 1 1 0 0 0 1 0 0 0 3 1 1 0 0 1 0 0 12 1 1393.7314 P57682 P57682 244 255 KLF3 Krueppel-like factor 3 yes yes 2 0.031661 62.081 By MS/MS By matching 1 1 6768300 3172100 3596100 4985 1921 5678 12538;12539 12178 12178 1 RPLSGPDVGTPQPAGLASGAK PQESSRDKRPLSGPDV AGLASGAKLAAGRPFN K R P A K L 3 1 0 1 0 1 0 4 0 0 2 1 0 0 4 2 1 0 0 1 0 0 21 1 1975.0487 O96013 O96013 178 198 PAK4 Serine/threonine-protein kinase PAK 4 yes yes 3 0.010713 51.264 By MS/MS By MS/MS 1 1 8593400 4420500 4172900 4986 1617 5679 12540;12541 12179;12180 12180 3061;7360 2 RPMEEDGEEKSPSK TYAITPMKRPMEEDGE GEEKSPSKKKKKIQKK K R P S K K 0 1 0 1 0 0 4 1 0 0 0 2 1 0 2 2 0 0 0 0 0 0 14 2 1617.7305 Q12906 Q12906 372 385 ILF3 Interleukin enhancer-binding factor 3 yes yes 3 0.0069394 80.596 By MS/MS 1 24048000 24048000 0 4987 2033 5680 12542 12181 12181 810 3980 1 RPMSSPEMK SGTKPANKRPMSSPEM PMSSPEMKSAPKKSKA K R P M K S 0 1 0 0 0 0 1 0 0 0 0 1 2 0 2 2 0 0 0 0 0 0 9 1 1061.4998 P51610;A6NEM2;H7C1C4 P51610 2016 2024 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.010403 80.737 By matching By MS/MS 1 1 6482600 3169900 3312800 4988 1877 5681 12543;12544 12182 12182 3638 1 RPNEDSDEDEEKGAVVPPVHDIYR AVLTKAVKRPNEDSDE PPVHDIYRARQQKRIR K R P Y R A 1 2 1 4 0 0 4 1 1 1 0 1 0 0 3 1 0 0 1 3 0 0 24 2 2765.2893 H0YE74;Q12996 H0YE74 60 83 CSTF3 Cleavage stimulation factor subunit 3 yes no 4 0.01401 48.872 By MS/MS By MS/MS 1 1 183880000 88114000 95768000 4989 1174 5682 12545;12546 12183;12184 12184 2219 2 RPNTSPDR RQSPPPAKRPNTSPDR RPNTSPDRGSRDRKSG K R P D R G 0 2 1 1 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 8 1 941.46789 E7ERS3;Q86VM9;H3BRH3 E7ERS3 872 879 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.029455 58.815 By MS/MS 1 0 0 0 4990 811 5683 12547 12185 12185 1 RPPESPPIVEEWNSR KEYQEYLKRPPESPPI IVEEWNSRAGGNQRNR K R P S R A 0 2 1 0 0 0 3 0 0 1 0 0 0 0 4 2 0 1 0 1 0 0 15 1 1791.8904 Q9BTL3 Q9BTL3 32 46 FAM103A1 RNMT-activating mini protein yes yes 3 0.0096558 71.842 By MS/MS 2 5828900 0 5828900 4991 2749 5684 12548;12549 12186;12187 12187 5717 1 RPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLR PTQQAVARRPPGGTSP AAAGSGLRRGAEGILA R R P L R R 9 2 1 0 1 0 0 9 0 0 4 0 0 0 12 4 2 0 0 1 0 0 45 1 4023.0749 Q8WWM7;H3BUF6 Q8WWM7 26 70 ATXN2L Ataxin-2-like protein yes no 4 0.0022387 42.761 By matching By MS/MS 1 1 88998000 41142000 47856000 4992 2564 5685 12550;12551 12188 12188 5246 1 RPPGPTTSPASTSLSSPGQR SPLDASPRRPPGPTTS SLSSPGQRDDLIASIL R R P Q R D 1 2 0 0 0 1 0 2 0 0 1 0 0 0 5 5 3 0 0 0 0 0 20 1 1980.0025 Q01970 Q01970 919 938 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes yes 3 0.0028012 63.376 By MS/MS By MS/MS 1 1 8498300 4241100 4257200 4993 1984 5686 12552;12553 12189;12190 12189 3810 2 RPPSPDVIVLSDNEQPSSPR HSDMKSERRPPSPDVI NEQPSSPRVNGLTTVA R R P P R V 0 2 1 2 0 1 1 0 0 1 1 0 0 0 5 4 0 0 0 2 0 0 20 1 2189.1077 Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4 97 116 GATAD2A Transcriptional repressor p66-alpha yes no 2;3 8.1107E-07 128.37 By MS/MS By MS/MS 3 6 308220000 124320000 183900000 4994 2420 5687;5688 12554;12555;12556;12557;12558;12559;12560;12561;12562 12191;12192;12193;12194;12195;12196;12197;12198;12199;12200;12201;12202;12203;12204;12205;12206 12194 4941;4942;4943;4944 16 RPPSPEPSTK QEEEERKRRPPSPEPS PSPEPSTKVSEEAESQ R R P T K V 0 1 0 0 0 0 1 0 0 0 0 1 0 0 4 2 1 0 0 0 0 0 10 1 1094.572 A0A087WUZ3;Q01082 A0A087WUZ3 2101 2110 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2;3 6.7254E-07 156 By MS/MS By MS/MS 1 3 118920000 53506000 65410000 4995 67 5689 12563;12564;12565;12566 12207;12208;12209;12210;12211;12212 12207 124 6 RPPSVGDVFHGISK SQFRVSSKRPPSVGDV DVFHGISKEDHRHSAP K R P S K E 0 1 0 1 0 0 0 2 1 1 0 1 0 1 2 2 0 0 0 2 0 0 14 1 1494.7943 E7EUR8;A0A1B0GVL4;P78312;D6RFZ4 E7EUR8 493 506 FAM193A Protein FAM193A yes no 3 0.0010185 83.877 By MS/MS 1 3873200 0 3873200 4996 429 5690 12567 12213 12213 804 1 RPPTPCSDPER LDLTKKGKRPPTPCSD TPCSDPERKRFRFNSE K R P E R K 0 2 0 1 1 0 1 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 11 1 1310.6037 Q9BW71 Q9BW71 81 91 HIRIP3 HIRA-interacting protein 3 yes yes 2 0.0019906 85.837 By MS/MS By MS/MS 1 1 22526000 9921000 12605000 4997 2760 5691 12568;12569 12214;12215 12214 5751;7829 2 RPQFSPTGDCQAEAAAAANGTGGEEDDGPAAELLEK KSRTKRFKRPQFSPTG PAAELLEKLQHPSAEV K R P E K L 8 1 1 3 1 2 5 5 0 0 2 1 0 1 3 1 2 0 0 0 0 0 36 1 3629.6176 Q7Z4Q2 Q7Z4Q2 11 46 HEATR3 HEAT repeat-containing protein 3 yes yes 3 0.00010864 60.181 By MS/MS By MS/MS 1 1 27691000 0 27691000 4998 2385 5692;5693 12570;12571 12216;12217 12217 4845;7688 2 RPQHNSSGASPR SPDPSPPRRPQHNSSG NSSGASPRRVRHDSPD R R P P R R 1 2 1 0 0 1 0 1 1 0 0 0 0 0 2 3 0 0 0 0 0 0 12 1 1292.6334 Q9BRD0 Q9BRD0 205 216 BUD13 BUD13 homolog yes yes 3 0.0051787 67.326 By MS/MS By MS/MS 1 1 5780200 3723800 2056400 4999 2742 5694 12572;12573 12218;12219 12219 5697;5698 2 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR YMRRPYGRRPQYSNPP GEQGRPVRQNMYRGYR R R P V R Q 2 3 2 1 0 4 3 5 0 0 0 0 1 0 4 1 0 0 1 3 0 0 30 2 3222.5225 H0Y449;P67809;C9J5V9 H0Y449 255 284 YBX1 Nuclease-sensitive element-binding protein 1 yes no 4 0.0035097 50.285 By MS/MS By matching 1 1 27052000 15508000 11544000 5000 1117 5695 12574;12575 12220 12220 406 2118 1 RPSPPEPWDEEDGASCSTFFGSEER QGLAARLRRPSPPEPW TFFGSEERTVTCVTVV R R P E R T 1 2 0 2 1 0 5 2 0 0 0 0 0 2 4 4 1 1 0 0 0 0 25 1 2868.1933 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 934 958 PHRF1 PHD and RING finger domain-containing protein 1 yes no 3 0.0067829 50.803 By MS/MS By MS/MS 1 1 24650000 9849500 14801000 5001 371 5696 12576;12577 12221;12222;12223 12222 688 3 RPSPQPSPR SYSPVERRRPSPQPSP PSPQPSPRDQQSSSSE R R P P R D 0 2 0 0 0 1 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 9 1 1020.5465 Q9UQ35;I3L4U6 Q9UQ35 2700 2708 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 0.0012429 91.265 By MS/MS By MS/MS 1 5 133290000 19989000 113300000 5002 3074 5697;5698 12578;12579;12580;12581;12582;12583 12224;12225;12226;12227;12228;12229;12230;12231 12228 6549;6550 8 RPSQEQSASASSGQPQAPLNR EKAEERPRRPSQEQSA QPQAPLNRERPESPMV R R P N R E 3 2 1 0 0 4 1 1 0 0 1 0 0 0 3 5 0 0 0 0 0 0 21 1 2195.0679 A0A0A0MT60;Q5T1M5 A0A0A0MT60 979 999 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2;3 5.2972E-12 140.35 By MS/MS By MS/MS 2 2 83619000 46539000 37079000 5003 266 5699 12584;12585;12586;12587 12232;12233;12234;12235 12233 467;468 4 RPSQGPPAR QGPAQTSRRPSQGPPA PSQGPPARSPSQDFSF R R P A R S 1 2 0 0 0 1 0 1 0 0 0 0 0 0 3 1 0 0 0 0 0 0 9 1 964.52026 Q9C0C2 Q9C0C2 1543 1551 TNKS1BP1 182 kDa tankyrase-1-binding protein no no 1 NaN 0 0 0 5004 2791 0 RPSQNAISFFNVGHSK SNSPISQRRPSQNAIS FFNVGHSKLQSLSKRT R R P S K L 1 1 2 0 0 1 0 1 1 1 0 1 0 2 1 3 0 0 0 1 0 0 16 1 1787.9067 Q9BXB4 Q9BXB4 187 202 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 3 2.5182E-42 173.03 By MS/MS By MS/MS 1 1 66336000 35346000 30990000 5005 2771 5700 12588;12589 12236;12237;12238;12239 12239 5764 4 RPSTSQTVSTPAPVPVIESTEAIEAK VSLASTPKRPSTSQTV STEAIEAKAALKQLQE K R P A K A 3 1 0 0 0 1 3 0 0 2 0 1 0 0 4 4 4 0 0 3 0 0 26 1 2694.4076 P12270 P12270 644 669 TPR Nucleoprotein TPR yes yes 3 0.0031147 59.792 By MS/MS By MS/MS 2 2 47051000 24175000 22875000 5006 1686 5701 12590;12591;12592;12593 12240;12241;12242 12240 3185;3186;7391;7392;7393 3 RPSVGSQSNQAGQGK PGVFLTQRRPSVGSQS SNQAGQGKRPKKGLAT R R P G K R 1 1 1 0 0 3 0 3 0 0 0 1 0 0 1 3 0 0 0 1 0 0 15 1 1499.7441 Q9UPP1;H0Y3N9 Q9UPP1 1019 1033 PHF8 Histone lysine demethylase PHF8 yes no 2 0.013421 71.08 By MS/MS By matching 1 1 7843300 3856400 3986900 5007 3066 5702 12594;12595 12243 12243 6480 1 RPTETNPVTSNSDEECNETVK RVKTTPLRRPTETNPV EECNETVKEKQKLSVP R R P V K E 0 1 3 1 1 0 4 0 0 0 0 1 0 0 2 2 4 0 0 2 0 0 21 1 2406.0605 P46100;A0A096LNL9;A0A096LNW1 P46100 666 686 ATRX Transcriptional regulator ATRX yes no 3 0.00012556 87.92 By MS/MS By MS/MS 1 1 23993000 12436000 11556000 5008 1837 5703 12596;12597 12244;12245;12246;12247 12245 3482;7449 4 RPTLAWLEDSSSCSDIPKLEGDSDDLLEDSDSEEHSR PSSGVDSRRPTLAWLE SDSEEHSRSDSVTGHT R R P S R S 1 2 0 7 1 0 5 1 1 1 5 1 0 0 2 8 1 1 0 0 0 0 37 2 4189.8506 Q9NR09 Q9NR09 451 487 BIRC6 Baculoviral IAP repeat-containing protein 6 yes yes 4 2.1642E-11 87.704 By MS/MS 1 10248000 0 10248000 5009 2903 5704 12598 12248;12249 12248 6115 2 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK KHRRTYARRPTPNDDT EHIPSPAKKVPRLPAT R R P A K K 2 1 2 3 0 0 2 2 2 2 2 1 0 0 4 2 3 0 0 2 0 0 30 1 3179.5847 Q01581 Q01581 469 498 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 4 1.6611E-10 93.236 By MS/MS 1 86515000 0 86515000 5010 1981 5705 12599 12250 12250 3803 1 RPTSVPSR R P S R 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 1 0 0 8 1 898.49846 REV__E9PK97 yes yes 2 0.023887 135.8 By matching By MS/MS 1 2 1182900000 120310000 1062600000 + 5011 3178 5706 12600;12601;12602 12251 12251 6773 1 RPVLRAEFTQMWR GGPLPYHRRPVLRAEF AEFTQMWRHLKEVELP R R P W R H 1 3 0 0 0 1 1 0 0 0 1 0 1 1 1 0 1 1 0 1 0 0 13 2 1688.8933 O75106 O75106 165 177 AOC2 Retina-specific copper amine oxidase yes yes 2 0.024681 52.101 By MS/MS By matching 1 1 6884400 4226200 2658200 5012 1534 5707 12603;12604 12252 12252 557 0 RPVSAVGYK LENQQMMKRPVSAVGY PVSAVGYKRPLSQHAR K R P Y K R 1 1 0 0 0 0 0 1 0 0 0 1 0 0 1 1 0 0 1 2 0 0 9 1 975.55016 O15066 O15066 628 636 KIF3B Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed yes yes 3 0.025697 49.189 By MS/MS 1 0 0 0 5013 1469 5708 12605 12253 12253 2744 1 RQDSDLVQCGVTSPSSAEATGK HSVIQLARRQDSDLVQ SSAEATGKLAVDTFPA R R Q G K L 2 1 0 2 1 2 1 2 0 0 1 1 0 0 1 4 2 0 0 2 0 0 22 1 2292.0652 Q9HC52 Q9HC52 253 274 CBX8 Chromobox protein homolog 8 yes yes 3 0.00044873 75.103 By MS/MS By MS/MS 2 1 19729000 15060000 4668700 5014 2871 5709 12606;12607;12608 12254;12255;12256 12254 6042;6043;6044 2 RQEELNNQLFLYDTHQNLR SSCRQLRRRQEELNNQ YDTHQNLRNANRDALV R R Q L R N 0 2 3 1 0 3 2 0 1 0 4 0 0 1 0 0 1 0 1 0 0 0 19 1 2430.204 A0A0A0MRF9;P16885 A0A0A0MRF9 1206 1224 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 3 9.4198E-05 102.84 By MS/MS By MS/MS 1 1 13545000 6973900 6571500 5015 212 5710 12609;12610 12257;12258 12257 8009 2 RQESSSSLEMPSGVALEEGAHVLR RNVHMLLRRQESSSSL EEGAHVLRCSHVTLEP R R Q L R C 2 2 0 0 0 1 4 2 1 0 3 0 1 0 1 5 0 0 0 2 0 0 24 1 2568.2602 P48553 P48553 705 728 TRAPPC10 Trafficking protein particle complex subunit 10 yes yes 3 0.0056837 64.318 By MS/MS 1 7424700 0 7424700 5016 1845 5711 12611 12259 12259 715 3535;3536;3537;3538 1 RQLHLEGASLELSDDDTESK FSSSRSGRRQLHLEGA SDDDTESKTSDVNETQ R R Q S K T 1 1 0 3 0 1 3 1 1 0 4 1 0 0 0 3 1 0 0 0 0 0 20 1 2242.0713 P35580 P35580 1944 1963 MYH10 Myosin-10 yes yes 3 0.00016555 87.808 By MS/MS By MS/MS 1 1 46067000 22712000 23355000 5017 1796 5712 12612;12613 12260;12261;12262 12260 3391;3392;7432 3 RQMSVPGIFNPHEIPEEMCD QADEEKHKRQMSVPGI EIPEEMCD________ K R Q C D - 0 1 1 1 1 1 3 1 1 2 0 0 2 1 3 1 0 0 0 1 0 0 20 1 2385.0552 O14980 O14980 1052 1071 XPO1 Exportin-1 yes yes 3 0.014284 47.729 By MS/MS 1 3931900 0 3931900 5018 1465 5713 12614 12263 12263 527;528 2726 1 RQQEKSVIAQPIFVFEK KLKLQEDRRQQEKSVI QPIFVFEKGEQTFKRP R R Q E K G 1 1 0 0 0 3 2 0 0 2 0 2 0 2 1 1 0 0 0 2 0 0 17 2 2046.1262 D6RCM9;Q86VV4 D6RCM9 28 44 RANBP3L Ran-binding protein 3-like yes no 3 0.025926 58.024 By MS/MS 1 0 0 0 5019 756 5714 12615 12264 12264 1364 1 RQSFASLALR DEIEKTDRRQSFASLA SFASLALRKRYSYLTE R R Q L R K 2 2 0 0 0 1 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 0 10 1 1147.6462 H0Y3A4;A0A087WZ65;A0A087WTF3;Q12955;H0YA66 H0Y3A4 40 49 ANK3 Ankyrin-3 yes no 2 0.0043992 96.23 By MS/MS By matching 1 1 18482000 9897000 8585300 5020 31 5715 12616;12617 12265 12265 62 1 RQSIPEEFK PDGALAVRRQSIPEEF QSIPEEFKGSTVVELM R R Q F K G 0 1 0 0 0 1 2 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 9 1 1132.5877 F5H3G9;F5H4N6;Q9Y3R0 F5H3G9 67 75 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.01302 77.597 By MS/MS 1 9256900 9256900 0 5021 968 5716 12618 12266 12266 1822 1 RQSPEPSPVTLGR ESKRRCRKRQSPEPSP PSPVTLGRRSSGRQGG K R Q G R R 0 2 0 0 0 1 1 1 0 0 1 0 0 0 3 2 1 0 0 1 0 0 13 1 1422.7579 Q9NRL2 Q9NRL2 1411 1423 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 3 0.00029169 95.651 By MS/MS By MS/MS 1 1 21970000 11285000 10686000 5022 2908 5717 12619;12620 12267;12268 12268 6134 2 RQSPLPPQK ________________ QSPLPPQKKKPRPPPA K R Q Q K K 0 1 0 0 0 2 0 0 0 0 1 1 0 0 3 1 0 0 0 0 0 0 9 1 1049.5982 Q01105;B2REB7 Q01105 5 13 SET Protein SET yes no 2 0.032335 61.593 By MS/MS By matching 1 1 4644400 2541700 2102700 5023 1977 5718 12621;12622 12269 12269 1 RQSSGSATNVASTPDNR SLGRIRTRRQSSGSAT VASTPDNRGRSRAKVV R R Q N R G 2 2 2 1 0 1 0 1 0 0 0 0 0 0 1 4 2 0 0 1 0 0 17 1 1746.8245 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 425 441 CLASP1 CLIP-associating protein 1 yes no 2;3 0.0002433 117.29 By MS/MS By MS/MS 2 2 81289000 34924000 46365000 5024 1043 5719 12623;12624;12625;12626 12270;12271;12272;12273 12272 1973;1974;1975 4 RQSSTPSAPELGQQPDVNISEWK ________________ DVNISEWKDKPTHEIL K R Q W K D 1 1 1 1 0 3 2 1 0 1 1 1 0 0 3 4 1 1 0 1 0 0 23 1 2553.2459 I3L213;Q93100 I3L213 5 27 PHKB Phosphorylase b kinase regulatory subunit beta yes no 3 2.6406E-05 92.034 By MS/MS By MS/MS 1 2 12039000 6105800 5933200 5025 1307 5720 12627;12628;12629 12274;12275;12276;12277 12276 2428;2429;7242 4 RRASQEANLLTLAQK VIQSTRRRRRASQEAN NLLTLAQKAVELASLQ R R R Q K A 3 2 1 0 0 2 1 0 0 0 3 1 0 0 0 1 1 0 0 0 0 0 15 2 1697.9537 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 458 472 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 3 0.00090114 105.99 By MS/MS By MS/MS 1 1 10442000 6160700 4281200 5026 259 5721 12630;12631 12278;12279 12278 450 2 RRDEDMLYSPELAQR FALDLPPRRRDEDMLY YSPELAQRGHDDDVSS R R R Q R G 1 3 0 2 0 1 2 0 0 0 2 0 1 0 1 1 0 0 1 0 0 0 15 2 1877.9054 Q9Y2W2 Q9Y2W2 229 243 WBP11 WW domain-binding protein 11 yes yes 3 0.0097674 76.068 By MS/MS 1 27369000 0 27369000 5027 3097 5722 12632 12280 12280 1235 6655 1 RRDSDGVDGFEAEGK NIHNNRKRRRDSDGVD DGFEAEGKKDKKDYDN R R R G K K 1 2 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 15 2 1636.7441 Q96KR1 Q96KR1 1051 1065 ZFR Zinc finger RNA-binding protein yes yes 3 0.027885 60.657 By matching By MS/MS 1 1 33212000 16394000 16818000 5028 2679 5723 12633;12634 12281 12281 5536 1 RREEGPPPPSPDGASSDAEPEPPSGR GTQPSTARRREEGPPP EPEPPSGRTESPATAA R R R G R T 2 3 0 2 0 0 4 3 0 0 0 0 0 0 8 4 0 0 0 0 0 0 26 2 2670.227 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 13 38 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 0.0036076 63.109 By MS/MS By MS/MS 1 2 136620000 59257000 77358000 5029 616 5724;5725 12635;12636;12637 12282;12283;12284 12282 1120;1121;1122 3 RRGSSGSVDETLFALPAASEPVIR PSTPAAPKRRGSSGSV AASEPVIRSSAENMDL K R R I R S 3 3 0 1 0 0 2 2 0 1 2 0 0 1 2 4 1 0 0 2 0 0 24 2 2514.319 Q9NQC3 Q9NQC3 178 201 RTN4 Reticulon-4 yes yes 3 0.0045245 65.189 By MS/MS By matching 1 1 16860000 9364200 7495800 5030 2893 5726 12638;12639 12285 12285 6089;6090;6091;7869 1 RRPGAQPLPPPPPSQSPEPTEPHPR CDSKMAARRRPGAQPL EPTEPHPRALAPSPPA R R R P R A 1 3 0 0 0 2 2 1 1 0 1 0 0 0 11 2 1 0 0 0 0 0 25 2 2721.4099 K7EPZ6;A0A0A0MS90;Q9UIS9 K7EPZ6 183 207 MBD1 Methyl-CpG-binding domain protein 1 yes no 4 0.017869 46.971 By matching By MS/MS 1 1 8184500 2342200 5842300 5031 242 5727 12640;12641 12286 12286 426 1 RRSPPADAIPK MSPKRIAKRRSPPADA PPADAIPKSKKVKDTR K R R P K S 2 2 0 1 0 0 0 0 0 1 0 1 0 0 3 1 0 0 0 0 0 0 11 2 1206.6833 M0R1Q8;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4;C9JW69;P18754 M0R1Q8 111 121 RCC1 Regulator of chromosome condensation yes no 3 0.0043624 83.877 By MS/MS By MS/MS 1 1 75935000 36560000 39375000 5032 633 5728 12642;12643 12287;12288;12289 12288 1184 3 RRSPSPYYSR EDYDYRYRRRSPSPYY SPSPYYSRYRSRSRSR R R R S R Y 0 3 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 2 0 0 0 10 2 1267.6422 Q13595;H7BXF3;P62995 Q13595 258 267 TRA2A;TRA2B Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta yes no 3 0.012397 64.798 By MS/MS By matching 1 1 497610000 294660000 202950000 5033 2069 5729 12644;12645 12290 12290 4082;4083 1 RRTPSPPPR RTPTPPPRRRTPSPPP RTPSPPPRRRSPSPRR R R R P R R 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 9 2 1062.6047 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 588 596 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.013225 62.298 By MS/MS By MS/MS 1 1 47480000 24843000 22638000 5034 511 5730 12646;12647 12291;12292 12292 955;6975 2 RRTPTPPPR SPAPPPRRRRTPTPPP RTPTPPPRRRTPSPPP R R R P R R 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4 0 2 0 0 0 0 0 9 2 1076.6203 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 579 587 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.023214 52.495 By MS/MS By matching 1 1 45124000 28424000 16700000 5035 511 5731 12648;12649 12293 12293 1 RSASASHQADIK GRPPKSARRSASASHQ ASHQADIKEARREVEV R R S I K E 3 1 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 12 1 1269.6426 C9JXK0;Q14739 C9JXK0 96 107 LBR Lamin-B receptor yes no 2;3 0.0020009 90.561 By MS/MS By MS/MS 2 2 36863000 10019000 26844000 5036 700 5732 12650;12651;12652;12653 12294;12295 12295 1295;1296 2 RSASPDDDLGSSNWEAADLGNEER ESHPHGVKRSASPDDD ADLGNEERKQKFLRLM K R S E R K 3 2 2 4 0 0 3 2 0 0 2 0 0 0 1 4 0 1 0 0 0 0 24 1 2590.1168 E9PM92;E9PQA1;O00193 O00193 14 37 C11orf58;SMAP Small acidic protein no no 2;3 6.3602E-06 107.98 By MS/MS By MS/MS 2 2 520270000 277180000 243090000 5037 910;1428 5733 12654;12655;12656;12657 12296;12297;12298;12299;12300 12296 1687;1688 5 RSCFESSPDPELK EQSVTPQRRSCFESSP SSPDPELKSRTPSRHS R R S L K S 0 1 0 1 1 0 2 0 0 0 1 1 0 1 2 3 0 0 0 0 0 0 13 1 1550.7035 Q9UQ35;I3L4D8;I3L182 Q9UQ35 870 882 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0011372 99.747 By MS/MS By MS/MS 1 1 24228000 13833000 10396000 5038 3074 5734 12658;12659 12301;12302 12301 6551;6552;6553 2 RSDSASSEPVGIYQGFEK QVTQRASRRSDSASSE GIYQGFEKKTGVAGED R R S E K K 1 1 0 1 0 1 2 2 0 1 0 1 0 1 1 4 0 0 1 1 0 0 18 1 1955.9225 Q05655 Q05655 301 318 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2 0.00011077 98 By MS/MS By MS/MS 1 1 19811000 10235000 9576200 5039 2004 5735 12660;12661 12303;12304 12303 3865;3866;8319 2 RSDSASSEPVGIYQGFEKK QVTQRASRRSDSASSE IYQGFEKKTGVAGEDM R R S K K T 1 1 0 1 0 1 2 2 0 1 0 2 0 1 1 4 0 0 1 1 0 0 19 2 2084.0174 Q05655 Q05655 301 319 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 3 0.00049007 78.674 By MS/MS 1 7522400 7522400 0 5040 2004 5736 12662 12305 12305 3865;3866;8319 1 RSDSLLSFR FPSEPGLRRSDSLLSF SDSLLSFRLDLDLGPS R R S F R L 0 2 0 1 0 0 0 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 9 1 1079.5724 Q00587 Q00587 189 197 CDC42EP1 Cdc42 effector protein 1 yes yes 2 0.0034562 127.52 By MS/MS By MS/MS 1 1 94765000 52375000 42390000 5041 1974 5737 12663;12664 12306;12307;12308 12307 3784 2 RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR DVGAGALRRSDSPEIP GNSFVGLRVVAKWSSN R R S L R V 4 2 1 3 0 1 1 4 0 1 2 0 0 2 4 6 0 0 0 1 0 0 32 1 3201.5327 Q12888;A6NNK5 Q12888 1459 1490 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3;4 4.3676E-11 107.17 By MS/MS By MS/MS 1 2 274800000 130740000 144050000 5042 2031 5738 12665;12666;12667 12309;12310;12311;12312 12309 3963;3964 4 RSEACPCQPDSGSPLPAEEEK MKRSIEGRRSEACPCQ PLPAEEEKRLSAESGL R R S E K R 2 1 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 21 1 2343.0107 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5 A0A0G2JNZ2 492 512 SCRIB Protein scribble homolog yes no 3 0.00038496 77.838 By MS/MS By MS/MS 1 1 57213000 33462000 23750000 5043 361 5739 12668;12669 12313;12314 12314 664;665 2 RSEACPCQPDSGSPLPAEEEKR MKRSIEGRRSEACPCQ LPAEEEKRLSAESGLS R R S K R L 2 2 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 22 2 2499.1118 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5 A0A0G2JNZ2 492 513 SCRIB Protein scribble homolog yes no 3 0.0024804 71.265 By MS/MS By MS/MS 1 1 14073000 6882800 7190200 5044 361 5740 12670;12671 12315;12316;12317 12316 664;665 3 RSETPPHWR SRSRDRFRRSETPPHW SETPPHWRQEMQRAQR R R S W R Q 0 2 0 0 0 0 1 0 1 0 0 0 0 0 2 1 1 1 0 0 0 0 9 1 1164.5788 E9PG73;Q13427;C9JM79 E9PG73 340 348 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 3 0.015992 73.36 By MS/MS By matching 1 1 11267000 6188900 5078500 5045 871 5741 12672;12673 12318 12318 1 RSFAMLPR CGLGFSERRSFAMLPR RSFAMLPRLVSKLLGS R R S P R L 1 2 0 0 0 0 0 0 0 0 1 0 1 1 1 1 0 0 0 0 0 0 8 1 976.52766 E9PM92 E9PM92 108 115 C11orf58 yes yes 1 0.0059756 64.42 By MS/MS By matching 1 1 3972000 2013100 1958900 5046 910 5742 12674;12675 12319;12320 12320 343 1689 2 RSFMGPSLK SKAESSSKRSFMGPSL SFMGPSLKKLGLLFSK K R S L K K 0 1 0 0 0 0 0 1 0 0 1 1 1 1 1 2 0 0 0 0 0 0 9 1 1021.5379 Q9UL62 Q9UL62 835 843 TRPC5 Short transient receptor potential channel 5 yes yes 1 0.024452 46.819 By matching By MS/MS 1 2 7955600 2122500 5833000 5047 3036 5743 12676;12677;12678 12321;12322 12321 1205 6391 0 RSFSISPSRR RSRSVGRRRSFSISPS FSISPSRRSRTPSRRS R R S R R S 0 3 0 0 0 0 0 0 0 1 0 0 0 1 1 4 0 0 0 0 0 0 10 2 1191.6473 P18583;H7C1M2;H7C2G8 P18583 1947 1956 SON Protein SON yes no 1 0.029311 47.971 By MS/MS By matching 1 1 5371600 2784300 2587200 5048 1725 5744 12679;12680 12323 12323 0 RSFSKEVEER RARTPATKRSFSKEVE FSKEVEERSRERPSQP K R S E R S 0 2 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 10 2 1265.6364 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1021 1030 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 0.0080672 78.529 By MS/MS By matching 1 1 39467000 20339000 19128000 5049 826 5745 12681;12682 12324 12324 1527 1 RSFSSHMPTMQRLFMTQFTQGLK CYRIWTKKRSFSSHMP TQFTQGLKGLRSPASI K R S L K G 0 2 0 0 0 3 0 1 1 0 2 1 3 3 1 3 3 0 0 0 0 0 23 2 2758.3506 Q5THK1;H3BLU3;H7BZH1 Q5THK1 1839 1861 PRR14L Protein PRR14L yes no 3 0.024307 51.166 By MS/MS By matching 1 1 6341500 3905300 2436200 5050 2258 5746 12683;12684 12325 12325 0 RSGERQSNGCLMVGHLQK TYSCCSQKRSGERQSN LMVGHLQKRKWKM___ K R S Q K R 0 2 1 0 1 2 1 3 1 0 2 1 1 0 0 2 0 0 0 1 0 0 18 2 2056.0055 B6ZDF2 B6ZDF2 133 150 SLC15A4 yes yes 3 0.020212 53.328 By MS/MS 1 2335000 2335000 0 5051 585 5747 12685 12326 12326 1068 0 RSIQKNMVYTCHR EGCKGFFRRSIQKNMV NMVYTCHRDKNCIINK R R S H R D 0 2 1 0 1 1 0 0 1 1 0 1 1 0 0 1 1 0 1 1 0 0 13 2 1691.8348 A8MUP8;P13631;P10276 A8MUP8 130 142 RARA;RARG Retinoic acid receptor gamma;Retinoic acid receptor alpha yes no 2 0.008242 70.563 By MS/MS 1 0 0 0 5052 498 5748 12686 12327 12327 912;6966 1 RSLDLPYPSSFAPVSAPRNQTFTYMGK NIDMTGEKRSLDLPYP QTFTYMGKFSIDPQYP K R S G K F 2 2 1 1 0 1 0 1 0 0 2 1 1 2 4 4 2 0 2 1 0 0 27 2 3029.5069 A0A1B0GUL0;P11161 A0A1B0GUL0 69 95 EGR2 E3 SUMO-protein ligase EGR2 yes no 3 0.026469 51.857 By MS/MS 1 0 0 0 5053 421 5749 12687 12328 12328 789;790 1 RSLSGSSPCPK AKSRLSLRRSLSGSSP SGSSPCPKQKSQTPPR R R S P K Q 0 1 0 0 1 0 0 1 0 0 1 1 0 0 2 4 0 0 0 0 0 0 11 1 1174.5765 Q9UQ35;I3L4D8;I3L182 Q9UQ35 777 787 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.011989 60.345 By MS/MS By MS/MS 2 2 15902000 9316100 6586200 5054 3074 5750 12688;12689;12690;12691 12329;12330;12331 12330 6554;6555;6556;6557 1 RSLTESLESILSR DMLKNKAKRSLTESLE SLESILSRGNKARGLQ K R S S R G 0 2 0 0 0 0 2 0 0 1 3 0 0 0 0 4 1 0 0 0 0 0 13 1 1489.81 C9JIE2;H0Y8P0;Q86TI0 C9JIE2 373 385 TBC1D1 TBC1 domain family member 1 yes no 2 0.026433 53.327 By MS/MS 1 0 0 0 5055 667 5751 12692 12332 12332 1235;1236 1 RSLTNSHLEK FISDRESRRSLTNSHL LTNSHLEKKKCDEYIP R R S E K K 0 1 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 10 1 1183.6309 F8VX12;F8VX04;Q9H2H9 F8VX12 51 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 3 0.00014576 139.74 By MS/MS 1 34091000 0 34091000 5056 1024 5752 12693 12333 12333 1916;1917;7156 1 RSNSAPLIHGLSDTSPVFQAEAPSAR SGGGGGLRRSNSAPLI QAEAPSARRNSTTFPS R R S A R R 4 2 1 1 0 1 1 1 1 1 2 0 0 1 3 5 1 0 0 1 0 0 26 1 2707.3678 Q96E09 Q96E09 34 59 FAM122A Protein FAM122A yes yes 3 0.00017139 74.123 By matching By MS/MS 1 1 18131000 9999800 8131200 5057 2640 5753 12694;12695 12334 12334 5440;5441;5442;7783 1 RSPAQPGNSLK R S L K 1 1 1 0 0 1 0 1 0 0 1 1 0 0 2 2 0 0 0 0 0 0 11 1 1153.6204 REV__Q5QPM3 yes no 3 0.018222 52.391 By MS/MS By matching 2 1 9723000 8696900 1026100 + 5058 3210 5754 12696;12697;12698 12335 12335 6808 1 RSPDAVASPGAPAPAPAPFR APDSAFARRSPDAVAS APAPAPFRDLASAAAT R R S F R D 6 2 0 1 0 0 0 1 0 0 0 0 0 1 6 2 0 0 0 1 0 0 20 1 1931.0013 A6NJT0 A6NJT0 442 461 UNCX Homeobox protein unc-4 homolog yes yes 2;3 0.00098093 93.062 By MS/MS By MS/MS 2 2 42246000 21357000 20889000 5059 476 5755;5756 12699;12700;12701;12702 12336;12337 12337 869;870 1 RSPGLQDHL QHNQLRVKRSPGLQDH SPGLQDHL________ K R S H L - 0 1 0 1 0 1 0 1 1 0 2 0 0 0 1 1 0 0 0 0 0 0 9 1 1021.5305 P10745 P10745 1239 1247 RBP3 Retinol-binding protein 3 yes yes 1 0.027975 49.06 By MS/MS 1 4604000 4604000 0 5060 1676 5757 12703 12338 12338 3162 0 RSPGTGDFSR NRRSAACKRSPGTGDF PGTGDFSRNSNASNKS K R S S R N 0 2 0 1 0 0 0 2 0 0 0 0 0 1 1 2 1 0 0 0 0 0 10 1 1078.5156 C9JRD7;C9JIJ8;C9J293;C9J5D2;C9J198;C9J9Z3;C9JFB6;U3KPS7;O95447 C9JRD7 31 40 LCA5L Lebercilin-like protein yes no 1 0.026208 43.808 By MS/MS By matching 1 1 10487000 4662500 5824300 5061 626 5758 12704;12705 12339 12339 1174;1175 1 RSPGTGDFSRNSNASNK NRRSAACKRSPGTGDF RNSNASNKSVDYSRSQ K R S N K S 1 2 3 1 0 0 0 2 0 0 0 1 0 1 1 4 1 0 0 0 0 0 17 2 1793.8405 C9JRD7;C9JIJ8;C9J293;C9J5D2;C9J198;C9J9Z3;C9JFB6;U3KPS7;O95447 C9JRD7 31 47 LCA5L Lebercilin-like protein yes no 3 0.030804 48.896 By MS/MS 1 0 0 0 5062 626 5759 12706 12340 12340 1174;1175 1 RSPQQTVPYVVPLSPK VTERQSTKRSPQQTVP YVVPLSPKLPKTKEYA K R S P K L 0 1 0 0 0 2 0 0 0 0 1 1 0 0 4 2 1 0 1 3 0 0 16 1 1794.9992 H0Y6S1;Q9UQR0 H0Y6S1 14 29 SCML2 Sex comb on midleg-like protein 2 yes no 2;3 0.0001794 117.6 By MS/MS By MS/MS 3 3 89887000 49648000 40239000 5063 1136 5760;5761 12707;12708;12709;12710;12711;12712 12341;12342;12343;12344;12345;12346;12347 12344 2160;2161;7199 5 RSPSPYSLK SRQNAEGRRSPSPYSL SPSPYSLKCSPTRETL R R S L K C 0 1 0 0 0 0 0 0 0 0 1 1 0 0 2 3 0 0 1 0 0 0 9 1 1033.5556 A8WI62;A8WI61;F6XDC4;E9PSF3;E9PI60;Q9ULD4 A8WI62 16 24 BRPF3 Bromodomain and PHD finger-containing protein 3 yes no 2 0.01117 96.745 By MS/MS By matching 1 1 12417000 7514400 4902200 5064 509 5762 12713;12714 12348 12348 929;930 1 RSPSPYSLKCSPTR SRQNAEGRRSPSPYSL SLKCSPTRETLTYAQA R R S T R E 0 2 0 0 1 0 0 0 0 0 1 1 0 0 3 4 1 0 1 0 0 0 14 2 1634.8199 A8WI62;A8WI61;F6XDC4;E9PSF3;E9PI60;Q9ULD4 A8WI62 16 29 BRPF3 Bromodomain and PHD finger-containing protein 3 yes no 2 0.0084185 68.657 By MS/MS By matching 1 1 17889000 5711100 12178000 5065 509 5763 12715;12716 12349 12349 929;930;931;6969 0 RSPSPYYSR DYDYRYRRRSPSPYYS SPSPYYSRYRSRSRSR R R S S R Y 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 2 0 0 0 9 1 1111.5411 Q13595;H7BXF3;P62995;H7C2L4 Q13595 259 267 TRA2A;TRA2B Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta yes no 2 0.020655 79.886 By MS/MS By MS/MS 1 1 49477000 27440000 22037000 5066 2069 5764 12717;12718 12350;12351 12351 4082;4083 2 RSQNSMNR VKIKLKQRRSQNSMNR RSQNSMNRLAVQALEK R R S N R L 0 2 2 0 0 1 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 8 1 991.46176 Q9ULT6 Q9ULT6 246 253 ZNRF3 E3 ubiquitin-protein ligase ZNRF3 yes yes 1 0.03124 50.108 By MS/MS 1 2068200 2068200 0 5067 3048 5765 12719 12352 12352 0 RSQSLAICQWNKNSR PGEAEHRKRSQSLAIC CQWNKNSR________ K R S S R - 1 2 2 0 1 2 0 0 0 1 1 1 0 0 0 3 0 1 0 0 0 0 15 2 1846.922 Q9NQ32 Q9NQ32 453 467 C11orf16 Uncharacterized protein C11orf16 yes yes 2 0.013697 51.727 By matching By MS/MS 1 1 8210600 3125800 5084800 5068 2891 5766 12720;12721 12353 12353 6086;6087 1 RSQSSFNLRK KGFEAEFKRSQSSFNL QSSFNLRKPSVHWSDA K R S R K P 0 2 1 0 0 1 0 0 0 0 1 1 0 1 0 3 0 0 0 0 0 0 10 2 1221.6578 A0A0A6YYJ7 A0A0A6YYJ7 88 97 TRAV8-3 yes yes 2 0.0037771 78.113 By MS/MS 1 13269000 0 13269000 5069 284 5767 12722 12354 12354 11 505;506 1 RSQTFLEKHLNSSHPR GQDEKLWKRSQTFLEK HLNSSHPRSQPAILLL K R S P R S 0 2 1 0 0 1 1 0 2 0 2 1 0 1 1 3 1 0 0 0 0 0 16 2 1936.0027 A0A0A0MSK5;J3KN66;Q5JTV8;H0Y4R4 A0A0A0MSK5 268 283 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 2 0.025968 64.675 By MS/MS 1 0 0 0 5070 251 5768 12723 12355 12355 437;438 1 RSRSVSPCSNVESR VTSRTTPRRSRSVSPC PCSNVESRLLPRYSHS R R S S R L 0 3 1 0 1 0 1 0 0 0 0 0 0 0 1 5 0 0 0 2 0 0 14 2 1619.7798 Q9UQ35;I3L4D8;I3L182 Q9UQ35 949 962 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.013917 61.757 By matching By MS/MS 1 1 35940000 16244000 19696000 5071 3074 5769 12724;12725 12356 12356 6558;6559;6560 1 RSSDGSLSHEEDLAK NTPSTSGKRSSDGSLS SHEEDLAKVIELQEII K R S A K V 1 1 0 2 0 0 2 1 1 0 2 1 0 0 0 4 0 0 0 0 0 0 15 1 1629.7594 Q13136;H0YEF9;E9PJZ7 Q13136 237 251 PPFIA1 Liprin-alpha-1 yes no 3 0.00089466 82.925 By MS/MS By MS/MS 1 1 6782000 3350200 3431800 5072 2045 5770 12726;12727 12357;12358 12358 4012;4013 2 RSSDPWSNSHFPHEN IWSPTIGRRSSDPWSN NSHFPHEN________ R R S E N - 0 1 2 1 0 0 1 0 2 0 0 0 0 1 2 4 0 1 0 0 0 0 15 1 1795.7663 Q92545 Q92545 1869 1883 TMEM131 Transmembrane protein 131 yes yes 3 0.0024601 73.928 By MS/MS 1 4513300 0 4513300 5073 2582 5771 12728 12359 12359 5302;5303 1 RSSGFISELPSEEGK FPSLRQEKRSSGFISE ELPSEEGKKLEHFTKL K R S G K K 0 1 0 0 0 0 3 2 0 1 1 1 0 1 1 4 0 0 0 0 0 0 15 1 1621.7948 Q5VZK9;A0A0U1RQQ1 Q5VZK9 966 980 LRRC16A Leucine-rich repeat-containing protein 16A yes no 2 0.0046774 79.837 By MS/MS 1 3577500 3577500 0 5074 2282 5772 12729 12360;12361 12361 4586;4587 2 RSSGLSSR WGRGIKSRRSSGLSSR RSSGLSSRENSALTLT R R S S R E 0 2 0 0 0 0 0 1 0 0 1 0 0 0 0 4 0 0 0 0 0 0 8 1 848.44643 Q9NT68 Q9NT68 140 147 TENM2 Teneurin-2;Ten-2, soluble form;Ten-2 intracellular domain yes yes 1 0.028282 50.194 By MS/MS 1 2556900 0 2556900 5075 2917 5773 12730 12362 12362 6152;6153;6154 0 RSSGPAPQSLLSAWR TVHSTPVRRSSGPAPQ QSLLSAWRVSALPTPA R R S W R V 2 2 0 0 0 1 0 1 0 0 2 0 0 0 2 4 0 1 0 0 0 0 15 1 1611.8481 Q9NYZ3 Q9NYZ3 493 507 GTSE1 G2 and S phase-expressed protein 1 yes yes 3 2.6201E-05 119.5 By MS/MS By MS/MS 1 1 5034400 5034400 0 5076 2952 5774 12731;12732 12363;12364;12365 12363 6224;6225 3 RSSITEPEGPGGPNIQK NAPRPLKKRSSITEPE PGGPNIQKLLYQRFNT K R S Q K L 0 1 1 0 0 1 2 3 0 2 0 1 0 0 3 2 1 0 0 0 0 0 17 1 1765.8959 H0YJL1;Q96KQ4 H0YJL1 364 380 PPP1R13B Apoptosis-stimulating of p53 protein 1 yes no 3 0.00024219 94.007 By MS/MS By MS/MS 1 1 8327400 3801700 4525700 5077 1196 5775 12733;12734 12366;12367 12367 2238;2239;7220 2 RSSITEPEGPNGPNIQK NAPRPLKKRSSITEPE PNGPNIQKLLYQRTTI K R S Q K L 0 1 2 0 0 1 2 2 0 2 0 1 0 0 3 2 1 0 0 0 0 0 17 1 1822.9173 Q13625 Q13625 735 751 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 3 0.00029561 92.773 By MS/MS By MS/MS 1 1 11782000 7294300 4487900 5078 2073 5776 12735;12736 12368;12369;12370;12371 12368 4090;4091 4 RSSKSFSLDEPPLFIPDNIATIR KNLQPRQRRSSKSFSL PDNIATIRREGSDHSS R R S I R R 1 2 1 2 0 0 1 0 0 3 2 1 0 2 3 4 1 0 0 0 0 0 23 2 2602.3755 Q92576;E7EVH3;D6R9X2;E9PE34;A0A1B0GX99 Q92576 676 698 PHF3 PHD finger protein 3 yes no 3 2.867E-05 95.47 By MS/MS By MS/MS 1 1 20613000 10367000 10246000 5079 2585 5777 12737;12738 12372;12373;12374;12375 12374 5309;5310;5311 4 RSSLLNAK GAHKKRARRSSLLNAK RSSLLNAKKLYEDAQM R R S A K K 1 1 1 0 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 8 1 887.51886 B7Z7Y1;E9PCH4;Q8TEU7;D6RE77 B7Z7Y1 1092 1099 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 2 0.013292 89.9 By MS/MS By MS/MS 1 1 39657000 22627000 17030000 5080 592 5778 12739;12740 12376;12377 12376 1080 2 RSSLLSLMTGK ESKKPESRRSSLLSLM LLSLMTGKKDVAKGSE R R S G K K 0 1 0 0 0 0 0 1 0 0 3 1 1 0 0 3 1 0 0 0 0 0 11 1 1191.6645 Q6WKZ4;E7EX40 Q6WKZ4 433 443 RAB11FIP1 Rab11 family-interacting protein 1 yes no 2 1.4795E-05 136.33 By MS/MS By MS/MS 2 2 44701000 25788000 18913000 5081 2346 5779;5780 12741;12742;12743;12744 12378;12379;12380;12381 12379 944 4761;4762 3 RSSPAAFINPPIGTVTPALK AREKISLKRSSPAAFI GTVTPALKLTKTIQRM K R S L K L 3 1 1 0 0 0 0 1 0 2 1 1 0 1 4 2 2 0 0 1 0 0 20 1 2036.1419 F6VRR5;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 125 144 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 yes no 3 0.000274 85.737 By MS/MS By MS/MS 1 1 31251000 15164000 16087000 5082 997 5781 12745;12746 12382;12383;12384;12385 12383 1874;1875 4 RSSPSARPPDVPGQQPQAAK KAEYPRRRRSSPSARP GQQPQAAKSPSPVQGK R R S A K S 3 2 0 1 0 3 0 1 0 0 0 1 0 0 5 3 0 0 0 1 0 0 20 2 2073.0715 A0A0A6YYC7;Q96JP5 A0A0A6YYC7 81 100 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 yes no 3 0.0054809 68.525 By MS/MS By matching 1 1 41009000 20616000 20394000 5083 281 5782 12747;12748 12386 12386 498;499 1 RSSTLSQLPGDK HVTPSVKKRSSTLSQL LSQLPGDKSKAFDFLS K R S D K S 0 1 0 1 0 1 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 12 1 1287.6783 O60271;A0A087X2D8 O60271 592 603 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 3 0.016265 54.768 By MS/MS By MS/MS 1 1 3518100 0 3518100 5084 1514 5783 12749;12750 12387;12388 12388 2854 2 RSSTSSEPTPTVK RQGMGLSRRSSTSSEP SEPTPTVKTLIKSFDS R R S V K T 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 4 3 0 0 1 0 0 13 1 1375.6943 Q69YQ0;F8WAN1 Q69YQ0 830 842 SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 2 1.293E-26 178.68 By MS/MS By MS/MS 1 1 25440000 13906000 11534000 5085 2299 5784 12751;12752 12389;12390;12391;12392 12390 4631 4 RSSTVAPAQPDGAESEWTDVETR ESPNGRKRRSSTVAPA EWTDVETRCSVAVEMR R R S T R C 3 2 0 2 0 1 3 1 0 0 0 0 0 0 2 3 3 1 0 2 0 0 23 1 2488.1466 H7BYN4;Q02241 H7BYN4 902 924 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 3 1.2965E-05 95.666 By MS/MS By matching 1 1 60061000 36259000 23802000 5086 1263 5785 12753;12754 12393 12393 2345 1 RSTFDGSNIPSINTLAQAEVRSR ERDRISTRRSTFDGSN AQAEVRSRQISVSSPG R R S S R Q 2 3 2 1 0 1 1 1 0 2 1 0 0 1 1 4 2 0 0 1 0 0 23 2 2518.2888 Q14541 Q14541 93 115 HNF4G Hepatocyte nuclear factor 4-gamma yes yes 2 0.01071 50.806 By MS/MS By MS/MS 1 1 21784000 12860000 8924100 5087 2090 5786;5787 12755;12756 12394;12395 12394 4125;4126 2 RSTRSESIK RKRRRSTRRSTRSESI STRSESIKSVGGG___ R R S I K S 0 2 0 0 0 0 1 0 0 1 0 1 0 0 0 3 1 0 0 0 0 0 9 2 1062.5782 A0A087WYF0 A0A087WYF0 147 155 ZCCHC17 yes yes 1 0.026456 47.657 By MS/MS 1 4935900 0 4935900 5088 122 5788 12757 12396 12396 210;211 0 RSTSPIIGSPPVR LSERALPRRSTSPIIG IIGSPPVRAVPIGTPP R R S V R A 0 2 0 0 0 0 0 1 0 2 0 0 0 0 3 3 1 0 0 1 0 0 13 1 1365.7728 Q86TB9 Q86TB9 176 188 PATL1 Protein PAT1 homolog 1 yes yes 2;3 0.00018445 121.42 By MS/MS By MS/MS 3 3 130490000 68213000 62276000 5089 2397 5789;5790 12758;12759;12760;12761;12762;12763 12397;12398;12399;12400 12397 4891;4892;4893 4 RSYMMDDLELIGLDYLWR ERKLIAKRRSYMMDDL IGLDYLWRVVIQSSDE R R S W R V 0 2 0 3 0 0 1 1 0 1 4 0 2 0 0 1 0 1 2 0 0 0 18 1 2288.097 O00507 O00507 760 777 USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes yes 2 0.03157 42.976 By MS/MS 1 0 0 0 5090 1440 5791 12764 12401 12401 508;509 1 RSYNYKTIVK GKIPSRFKRSYNYKTI YNYKTIVKKILAKLKR K R S V K K 0 1 1 0 0 0 0 0 0 1 0 2 0 0 0 1 1 0 2 1 0 0 10 2 1270.7034 Q6IQ21 Q6IQ21 328 337 ZNF770 Zinc finger protein 770 yes yes 2 0.027217 52.79 By MS/MS 1 0 0 0 5091 2304 5792 12765 12402 12402 4645 1 RTDALTSSPGR SSPGRSSRRTDALTSS ALTSSPGRDLPPFEDE R R T G R D 1 2 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 11 1 1159.5945 P49736;C9J013;C9JZ21;F8WDM3 P49736 34 44 MCM2 DNA replication licensing factor MCM2 yes no 2;3 0.0013436 82.529 By MS/MS By MS/MS 2 2 72490000 35310000 37179000 5092 1857 5793;5794 12766;12767;12768;12769 12403;12404;12405;12406 12403 3581;3582;7468 2 RTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIK TEEKKSLKRTFQQIQE LLTEELIKALQDLENA K R T I K A 1 1 0 4 0 4 5 2 0 2 3 1 0 1 4 3 2 0 2 0 0 0 35 1 3994.8596 Q9NQG5;A2A2M0 Q9NQG5 148 182 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 3 2.5067E-05 66.604 By MS/MS 1 39128000 0 39128000 5093 2894 5795 12770 12407 12407 6093;6094 1 RTFSLTEVR NPPPKLRRRTFSLTEV TFSLTEVRGQVSESED R R T V R G 0 2 0 0 0 0 1 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 9 1 1107.6037 O95239 O95239 798 806 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.0042115 108.98 By MS/MS By MS/MS 1 1 33232000 17723000 15509000 5094 1585 5796 12771;12772 12408;12409 12409 3004 2 RTIQEVLEEQSEDEDR TARKQLPKRTIQEVLE EQSEDEDREAKRKKEE K R T D R E 0 2 0 2 0 2 5 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 16 1 1974.913 M0R0Q7;P18858 M0R0Q7 131 146 LIG1 DNA ligase;DNA ligase 1 yes no 3 0.00011206 103.31 By MS/MS By MS/MS 1 1 14662000 8626400 6035300 5095 1420 5797 12773;12774 12410;12411 12410 2605 2 RTIQEVLEEQSEDEDREAK TARKQLPKRTIQEVLE EDEDREAKRKKEEEEE K R T A K R 1 2 0 2 0 2 6 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 19 2 2303.0877 M0R0Q7;P18858 M0R0Q7 131 149 LIG1 DNA ligase;DNA ligase 1 yes no 3 0.0032503 75.43 By MS/MS By matching 1 1 36029000 16887000 19141000 5096 1420 5798 12775;12776 12412 12412 2605 1 RTLMEAAVESVYVTSAGVSRLVQAYYQQIGR AKDRDDFKRTLMEAAV AYYQQIGRIMEDHEER K R T G R I 4 3 0 0 0 3 2 2 0 1 2 0 1 0 0 3 2 0 3 5 0 0 31 2 3444.7824 P57679 P57679 769 799 EVC Ellis-van Creveld syndrome protein yes yes 3 0.021543 50.857 By MS/MS 1 0 0 0 5097 1920 5799 12777 12413 12413 3714 1 RTMLLLSRSPEAQPK PVTGASLRRTMLLLSR RSPEAQPKTLPLTGST R R T P K T 1 2 0 0 0 1 1 0 0 0 3 1 1 0 2 2 1 0 0 0 0 0 15 2 1725.956 P55265 P55265 817 831 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 3 0.0069 65.295 By MS/MS By matching 1 1 45716000 25018000 20698000 5098 1913 5800 12778;12779 12414 12414 747 3700;3701;7494 1 RTPAPPEPGSPAPGEGPSGR KETLSPPRRTPAPPEP PGEGPSGRKRRRVPRD R R T G R K 2 2 0 0 0 0 2 4 0 0 0 0 0 0 7 2 1 0 0 0 0 0 20 1 1912.9391 P0C1Z6 P0C1Z6 171 190 TFPT TCF3 fusion partner yes yes 3 0.0006679 75.868 By matching By MS/MS 1 1 33685000 18120000 15565000 5099 1667 5801 12780;12781 12415 12415 3147 1 RTPSDDEEDNLFAPPK TLKEKKERRTPSDDEE DNLFAPPKLTDEDFSP R R T P K L 1 1 1 3 0 0 2 0 0 0 1 1 0 1 3 1 1 0 0 0 0 0 16 1 1829.8432 F8W7U3;E7ESD2;Q641Q2;A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1 F8W7U3 242 257 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 2;3 5.7148E-11 140.27 By MS/MS By MS/MS 2 2 62956000 33154000 29802000 5100 814;183 5802 12782;12783;12784;12785 12416;12417;12418;12419;12420 12417 317 5 RTPSSGMSSTMKESAFQSEPR GSCLALVKRTPSSGMS SAFQSEPRISESLVRH K R T P R I 1 2 0 0 0 1 2 1 0 0 0 1 2 1 2 6 2 0 0 0 0 0 21 2 2300.0525 Q5T4S7;A0A0A0MSW0 Q5T4S7 1730 1750 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 2 0.030147 49.627 By MS/MS 1 0 0 0 5101 2240 5803 12786 12421 12421 895 1 RTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMK HQGLWRRRRTSDPSAA VNSDEVMKKPCPVQIV R R T M K K 2 1 3 5 0 0 3 1 1 0 2 1 1 0 1 6 3 0 1 4 0 0 35 1 3781.6861 H7C3A2;Q8NHH9 H7C3A2 21 55 ATL2 Atlastin-2 yes no 3 0.010639 47.006 By MS/MS By matching 1 1 47871000 22835000 25036000 5102 1282 5804 12787;12788 12422 12422 461 7232 1 RTSFSFQK QKQRKLNRRTSFSFQK RTSFSFQKEKKSGQQ_ R R T Q K E 0 1 0 0 0 1 0 0 0 0 0 1 0 2 0 2 1 0 0 0 0 0 8 1 999.51378 H0Y7F8;Q9BPZ7 H0Y7F8 80 87 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 yes no 2 0.010224 104.21 By MS/MS By matching 1 1 19401000 10836000 8565000 5103 1139 5805 12789;12790 12423 12423 2164 1 RTSFSTSDVSK ALTPTEERRTSFSTSD FSTSDVSKLLPSLAKA R R T S K L 0 1 0 1 0 0 0 0 0 0 0 1 0 1 0 4 2 0 0 1 0 0 11 1 1213.5939 M0R0P8;Q13459;M0R300 M0R0P8 1352 1362 MYO9B Unconventional myosin-IXb yes no 2 0.019707 68.463 By MS/MS 1 9320500 0 9320500 5104 1419 5806 12791 12424 12424 2600 1 RTSIHDFLTK STAEGTTRRTSIHDFL SIHDFLTKDSRLPISV R R T T K D 0 1 0 1 0 0 0 0 1 1 1 1 0 1 0 1 2 0 0 0 0 0 10 1 1216.6564 H0Y7K3;H0Y470;H7C2C6;Q3V6T2 H0Y7K3 321 330 CCDC88A Girdin yes no 3 0.005679 65.495 By matching By MS/MS 1 1 7505500 4117500 3388000 5105 1119 5807 12792;12793 12425 12425 2126 1 RTSMGGTQQQFVEGVR RAHQDTQRRTSMGGTQ QQFVEGVRMEEIVEGC R R T V R M 0 2 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 16 1 1779.8686 B4DGU4;P35222 B4DGU4 543 558 CTNNB1 Catenin beta-1 yes no 2;3 2.3531E-31 165.89 By MS/MS By MS/MS 3 3 203410000 106660000 96748000 5106 550 5808;5809 12794;12795;12796;12797;12798;12799 12426;12427;12428;12429;12430 12427 218 1025;6989;6990 5 RTSPQVLGSILK PKAYELEKRTSPQVLG QVLGSILKSGTTSESG K R T L K S 0 1 0 0 0 1 0 1 0 1 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1297.7718 Q7Z417 Q7Z417 570 581 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 2.6889E-27 181.4 By MS/MS By MS/MS 1 1 41894000 23685000 18209000 5107 2380 5810 12800;12801 12431;12432 12432 4836 2 RTSSLDTITGPYLTGQWPR VRTSSTIRRTSSLDTI YLTGQWPRDPHVHYPS R R T P R D 0 2 0 1 0 1 0 2 0 1 2 0 0 0 2 2 4 1 1 0 0 0 19 1 2148.0964 Q86VQ1;H7C0Q2;H7C2L5 Q86VQ1 169 187 GLCCI1 Glucocorticoid-induced transcript 1 protein yes no 3 0.001624 85.046 By MS/MS By MS/MS 1 1 8152500 5071000 3081500 5108 2409 5811 12802;12803 12433;12434 12434 7699 1 RVGDPPQPLPEEPMEVQGAERASPEPQR DAILRYVRRVGDPPQP RASPEPQRENASPAPG R R V Q R E 2 3 0 1 0 3 5 2 0 0 1 0 1 0 7 1 0 0 0 2 0 0 28 2 3095.5094 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;H0Y710 A0A0G2JL47 936 963 BAT3;BAG6 Large proline-rich protein BAG6 yes no 4 8.2957E-05 69.704 By MS/MS By MS/MS 1 2 43425000 25589000 17836000 5109 6 5812 12804;12805;12806 12435;12436;12437;12438 12438 2 8 4 RVNDAEPGSPEAPQGK RRRPRRRRRVNDAEPG SPEAPQGKRRKADGED R R V G K R 2 1 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 16 1 1650.7962 Q8N8A6 Q8N8A6 75 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 3 0.00082793 80.236 By MS/MS By MS/MS 1 1 26320000 13201000 13119000 5110 2485 5813 12807;12808 12439;12440 12439 5074 2 RVNSASSSNPPAEVDPDTILK KKESELPRRVNSASSS VDPDTILKALFKSSGA R R V L K A 2 1 2 2 0 0 1 0 0 1 1 1 0 0 3 4 1 0 0 2 0 0 21 1 2196.1022 F6VRR5;Q9BY77 F6VRR5 397 417 POLDIP3 Polymerase delta-interacting protein 3 yes no 3 0.018622 58.339 By MS/MS 1 3273800 3273800 0 5111 997 5814 12809 12441 12441 1876 0 RVNSGDTEVGSSLLR RVKAIPRRRVNSGDTE EVGSSLLRHPSPELSR R R V L R H 0 2 1 1 0 0 1 2 0 0 2 0 0 0 0 3 1 0 0 2 0 0 15 1 1588.8169 O75592 O75592 3464 3478 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 3 0.004045 79.337 By MS/MS By MS/MS 1 1 4164900 4164900 0 5112 1550 5815 12810;12811 12442;12443 12443 2934 2 RVNSSAFQEADIVSSK SYLVDRPRRVNSSAFQ EADIVSSKDSGHGDSE R R V S K D 2 1 1 1 0 1 1 0 0 1 0 1 0 1 0 4 0 0 0 2 0 0 16 1 1736.8693 Q9P2E7 Q9P2E7 894 909 PCDH10 Protocadherin-10 yes yes 2;3 0.0083133 74.618 By MS/MS By matching 2 1 16724000 9122000 7602300 5113 2979 5816 12812;12813;12814 12444;12445;12446 12445 6273;6274 3 RVPLSPLSLLAGPADAR PGASPHHRRVPLSPLS LAGPADARRSQQQLPK R R V A R R 3 2 0 1 0 0 0 1 0 0 4 0 0 0 3 2 0 0 0 1 0 0 17 1 1731.9996 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 429 445 CRTC2 CREB-regulated transcription coactivator 2 yes no 2;3 4.1709E-07 118.05 By MS/MS By MS/MS 2 2 35172000 24656000 10515000 5114 2200 5817 12815;12816;12817;12818 12447;12448;12449;12450 12450 4405 4 RVPSPTPAPK VQPEVALKRVPSPTPA PSPTPAPKEAVREGRP K R V P K E 1 1 0 0 0 0 0 0 0 0 0 1 0 0 4 1 1 0 0 1 0 0 10 1 1048.6029 Q9UQ35 Q9UQ35 2578 2587 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.0034957 89.266 By MS/MS By MS/MS 2 2 759790000 373530000 386260000 5115 3074 5818 12819;12820;12821;12822 12451;12452;12453;12454;12455;12456 12455 6561 6 RVQSLPSVPLSCAAYR LPEQVELRRVQSLPSV PLSCAAYREALPGWMR R R V Y R E 2 2 0 0 1 1 0 0 0 0 2 0 0 0 2 3 0 0 1 2 0 0 16 1 1802.9461 Q96AD5 Q96AD5 401 416 PNPLA2 Patatin-like phospholipase domain-containing protein 2 yes yes 3 0.0027258 71.316 By MS/MS By MS/MS 1 1 11005000 6729300 4275900 5116 2619 5819 12823;12824 12457;12458 12457 5389 2 RVSEVEEEKEPVPQPLPSDDTR RLRGRGRRRVSEVEEE PLPSDDTRVENMDISD R R V T R V 0 2 0 2 0 1 5 0 0 0 1 1 0 0 4 2 1 0 0 3 0 0 22 2 2535.2453 O43290 O43290 446 467 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 3;4 0.00030634 78.674 By MS/MS By MS/MS 2 1 397670000 286920000 110750000 5117 1492 5820 12825;12826;12827 12459;12460;12461 12460 2788 3 RVSGPDPKPGSNCSPAQSVLSEVPSVPTNGMAK SSPLSKKRRVSGPDPK VPTNGMAKNGSEADID R R V A K N 2 1 2 1 1 1 1 3 0 0 1 2 1 0 6 6 1 0 0 4 0 0 33 2 3349.6395 P22314;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3;Q5JRS2 P22314 11 43 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 3;4 0.0060856 49.432 By MS/MS By MS/MS 2 2 356010000 158090000 197920000 5118 1747 5821 12828;12829;12830;12831 12462;12463;12464;12465;12466 12463 75 655 3290;3291 5 RVSISEGDDKIEYR GESVYGEKRVSISEGD GDDKIEYRAWNPFRSK K R V Y R A 0 2 0 2 0 0 2 1 0 2 0 1 0 0 0 2 0 0 1 1 0 0 14 2 1665.8322 M0R2U2;M0R1H0;M0R2B0;M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087 M0R2U2 109 122 FBL rRNA 2-O-methyltransferase fibrillarin yes no 3 0.01643 68.261 By MS/MS 1 16364000 0 16364000 5119 1401 5822 12832 12467 12467 2576 1 RVSLSEIGFGK KPLSRRLRRVSLSEIG LSEIGFGKLETYIKLD R R V G K L 0 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 1 0 0 11 1 1191.6612 E5RJM2;E5RGN0;A0A087WZU2;Q00536;H0YBX5 E5RJM2 151 161 CDK16 Cyclin-dependent kinase 16 yes no 2 0.0010956 108.06 By MS/MS By MS/MS 1 1 50811000 30641000 20170000 5120 146 5823 12833;12834 12468;12469;12470 12469 240 3 RVSLVGADDLR PQAEGPPKRVSLVGAD LVGADDLRKMQEEEAR K R V L R K 1 2 0 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 11 1 1199.6622 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YCG0 A0A0G2JNZ2 1376 1386 SCRIB Protein scribble homolog yes no 2 9.4675E-06 139.64 By MS/MS By MS/MS 1 1 132510000 76554000 55955000 5121 361 5824 12835;12836 12471;12472 12471 666 2 RVSLVGADDLRK PQAEGPPKRVSLVGAD VGADDLRKMQEEEARK K R V R K M 1 2 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 12 2 1327.7572 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5;H0YCG0 A0A0G2JNZ2 1376 1387 SCRIB Protein scribble homolog yes no 3 0.026818 62.469 By MS/MS 1 6717600 6717600 0 5122 361 5825 12837 12473 12473 666 1 RVSPLNLSSVTP SANNTPTRRVSPLNLS LNLSSVTP________ R R V T P - 0 1 1 0 0 0 0 0 0 0 2 0 0 0 2 3 1 0 0 2 0 0 12 1 1268.7089 Q9UJX2 Q9UJX2 586 597 CDC23 Cell division cycle protein 23 homolog yes yes 2 1.4969E-09 137.73 By MS/MS By MS/MS 2 2 39712000 23133000 16579000 5123 3013 5826;5827 12838;12839;12840;12841 12474;12475;12476;12477;12478;12479 12474 6342;7902 6 RVSRTPEPK SPSTRPIRRVSRTPEP VSRTPEPKKIKKAASP R R V P K K 0 2 0 0 0 0 1 0 0 0 0 1 0 0 2 1 1 0 0 1 0 0 9 2 1068.604 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 732 740 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.012376 69.216 By MS/MS By MS/MS 1 1 252300000 71156000 181140000 5124 511 5828 12842;12843 12480;12481 12480 956;6976 2 RVTLNTLQAWSKTTPR NTKAHPSRRVTLNTLQ AWSKTTPRRINLTPLK R R V P R R 1 2 1 0 0 1 0 0 0 0 2 1 0 0 1 1 4 1 0 1 0 0 16 2 1871.0377 Q13112 Q13112 483 498 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 0.032356 45.618 By MS/MS 1 26354000 26354000 0 5125 2041 5829 12844 12482 12482 0 RVTWCLGK ELKAKRKRRVTWCLGK RVTWCLGKINKMKNSN R R V G K I 0 1 0 0 1 0 0 1 0 0 1 1 0 0 0 0 1 1 0 1 0 0 8 1 1018.5382 D6RBW0;A0A087X0P0;Q02224 D6RBW0 420 427 CENPE Kinesin-like protein;Centromere-associated protein E yes no 2 0.01587 67.93 By MS/MS 1 0 0 0 5126 158 5830 12845 12483 12483 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR SRAIPATRRVVLGDGV STTPGGTRIIYDRKFL R R V T R I 0 2 0 2 0 1 0 7 0 0 3 0 0 1 4 2 6 0 1 3 0 0 32 1 3202.6259 Q13541 Q13541 20 51 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 3 8.547E-05 62.713 By MS/MS By MS/MS 4 2 280310000 169780000 110540000 5127 2063 5831;5832 12846;12847;12848;12849;12850;12851 12484;12485;12486;12487;12488;12489 12488 4074;4075;7558;7559;7560;7561;7562;8331 6 RWCLLLIWAQGLRQAPLASGMMTGTIETTGNISAEK ________________ TGNISAEKGGSIILQC M R W E K G 4 2 1 0 1 2 2 4 0 3 5 1 2 0 1 2 4 2 0 0 0 0 36 2 3973.0376 Q495A1 Q495A1 2 37 TIGIT T-cell immunoreceptor with Ig and ITIM domains yes yes 3 0.03145 40.799 By MS/MS 1 0 0 0 5128 2190 5833 12852 12490 12490 874;875 1 RWDQTADQTPGATPK QPPSKRKRRWDQTADQ QTPGATPKKLSSWDQA R R W P K K 2 1 0 2 0 2 0 1 0 0 0 1 0 0 2 0 3 1 0 0 0 0 15 1 1670.8012 O75533 O75533 199 213 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.022094 65.175 By MS/MS 1 3825900 0 3825900 5129 1549 5834 12853 12491 12491 1 RWLNRYSYTVLSSWPER ASGARRFRRWLNRYSY VLSSWPERALISLKNR R R W E R A 0 3 1 0 0 0 1 0 0 0 2 0 0 0 1 3 1 2 2 1 0 0 17 2 2212.1178 Q5U4N7 Q5U4N7 43 59 GDF5OS Protein GDF5OS, mitochondrial yes yes 3 0.016674 53.981 By MS/MS 1 4312700 4312700 0 5130 2259 5835 12854 12492 12492 4516;4517;8367 0 RWSIVSSPER KENDVLHKRWSIVSSP SIVSSPEREITLVNLK K R W E R E 0 2 0 0 0 0 1 0 0 1 0 0 0 0 1 3 0 1 0 1 0 0 10 1 1215.636 Q12923 Q12923 1080 1089 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.015069 72.531 By MS/MS By matching 1 1 14870000 7921800 6948600 5131 2034 5836 12855;12856 12493 12493 3985;3986 1 RYEDDGISDDEIEGK ________________ SDDEIEGKRTFDLEEK R R Y G K R 0 1 0 4 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 0 0 0 15 1 1739.7486 I3VM54;Q9Y2K7 I3VM54 4 18 KDM2A Lysine-specific demethylase 2A yes no 2 0.00083062 102.39 By MS/MS By MS/MS 1 1 33250000 20432000 12818000 5132 1315 5837 12857;12858 12494;12495;12496 12495 2441 3 RYGLLANTEDPTEMASLDSDEETVFESR RLKKPQRRRYGLLANT EETVFESRNLR_____ R R Y S R N 2 2 1 3 0 0 5 1 0 0 3 0 1 1 1 3 3 0 1 1 0 0 28 1 3174.4299 Q9BVV8 Q9BVV8 102 129 C19orf24 Uncharacterized membrane protein C19orf24 yes yes 3 0.02458 66.282 By MS/MS 1 20291000 0 20291000 5133 2759 5838 12859 12497 12497 1098 5742 1 RYLQSAQSQIHNTCWAMMGLMAVRHPDIEAQER ________________ PDIEAQERGVRCLLEK R R Y E R G 4 3 1 1 1 4 2 1 2 2 2 0 3 0 1 2 1 1 1 1 0 0 33 2 3926.8549 H7C3A5;A0A0G2JQD0;P48449 H7C3A5 8 40 LSS Lanosterol synthase yes no 3 0.015076 52.971 By MS/MS 1 0 0 0 5134 363 5839 12860 12498 12498 144;145 670;8033 1 RYPSSISSSPQK EQRSTQTRRYPSSISS SISSSPQKDLTQAKNG R R Y Q K D 0 1 0 0 0 1 0 0 0 1 0 1 0 0 2 5 0 0 1 0 0 0 12 1 1335.6783 F8W726;Q14157 F8W726 612 623 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 0.0010681 92.906 By MS/MS By MS/MS 1 2 77624000 6825200 70799000 5135 1035 5840 12861;12862;12863 12499;12500;12501;12502 12501 1943;1944;1945;1946 4 RYPSSISSSPQKDLTQAK EQRSTQTRRYPSSISS QKDLTQAKNGFSSVQA R R Y A K N 1 1 0 1 0 2 0 0 0 1 1 2 0 0 2 5 1 0 1 0 0 0 18 2 1992.0276 F8W726;Q14157 F8W726 612 629 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.00090781 89.659 By MS/MS By MS/MS 2 2 271780000 159030000 112750000 5136 1035 5841;5842 12864;12865;12866;12867 12503;12504;12505 12503 1943;1944;1945;1946 3 RYSDFEWLR LKESTVRRRYSDFEWL YSDFEWLRSELERESK R R Y L R S 0 2 0 1 0 0 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 0 9 1 1270.6095 O60493 O60493 70 78 SNX3 Sorting nexin-3 yes yes 2 0.00087646 115.57 By MS/MS By MS/MS 1 1 18496000 9465500 9030800 5137 1518 5843 12868;12869 12506;12507 12506 2868 2 RYSPPIQR RRRSPSPRRYSPPIQR RYSPPIQRRYSPSPPP R R Y Q R R 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 8 1 1015.5563 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 604 611 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.0048366 121.36 By MS/MS By MS/MS 2 2 572870000 335430000 237440000 5138 511 5844 12870;12871;12872;12873 12508;12509;12510;12511;12512;12513;12514 12509 957 7 RYSPSPPPK RYSPPIQRRYSPSPPP YSPSPPPKRRTASPPP R R Y P K R 0 1 0 0 0 0 0 0 0 0 0 1 0 0 4 2 0 0 1 0 0 0 9 1 1027.5451 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 612 620 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.024213 77.74 By MS/MS By matching 2 2 263470000 135930000 127540000 5139 511 5845 12874;12875;12876;12877 12515;12516 12515 958;959 1 SAAATSPAPHLVAGPLLGTVGK SLVYSDKKSAAATSPA PLLGTVGKAPATVTNL K S A G K A 5 0 0 0 0 0 0 3 1 0 3 1 0 0 3 2 2 0 0 2 0 0 22 0 2014.1211 A0A0A0MQR4;I3L2J0;Q96RK0 A0A0A0MQR4 734 755 CIC Protein capicua homolog yes no 2;3 0.00071835 72.209 By MS/MS By MS/MS 2 2 37484000 20221000 17264000 5140 186 5846 12878;12879;12880;12881 12517;12518;12519 12517 331;6877 3 SAAEMYGSSFDLDYDFQR RGKAGVKRSAAEMYGS DLDYDFQRDYYDRMYS R S A Q R D 2 1 0 3 0 1 1 1 0 0 1 0 1 2 0 3 0 0 2 0 0 0 18 0 2100.8735 G3V4C1;B2R5W2;G3V2D6;G3V4W0;B4DY08;G3V5X6;G3V3K6;G3V251 G3V4C1 100 117 HNRNPC yes no 2 0.030232 45.82 By MS/MS By matching 1 1 11509000 10008000 1500700 5141 1079 5847 12882;12883 12520 12520 389 1 SAAEMYGSVTEHPSPSPLLSSSFDLDYDFQR RGKAGVKRSAAEMYGS DLDYDFQRDYYDRMYS R S A Q R D 2 1 0 3 0 1 2 1 1 0 3 0 1 2 3 7 1 0 2 1 0 0 31 0 3432.5456 G3V2Q1;P07910;G3V576;G3V555;G3V575 G3V2Q1 100 130 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 3 0.029138 42.057 By matching By MS/MS 1 1 38807000 3844300 34962000 5142 1069 5848 12884;12885 12521 12521 386 0 SADEVLFTGVK ________________ EVLFTGVKEVDDFFEQ K S A V K E 1 0 0 1 0 0 1 1 0 0 1 1 0 1 0 1 1 0 0 2 0 0 11 0 1164.6027 A0A087WUY5;Q5QPE4;Q5QPE5;Q9Y5X3 A0A087WUY5 3 13 SNX5 Sorting nexin-5 yes no 2 0.0010671 106.26 By matching By MS/MS 1 1 3383600 2004000 1379600 5143 65 5849 12886;12887 12522 12522 115 1 SADTLWDIQK DEVAQLKKSADTLWDI DTLWDIQKDLKDL___ K S A Q K D 1 0 0 2 0 1 0 0 0 1 1 1 0 0 0 1 1 1 0 0 0 0 10 0 1175.5823 P07195 P07195 320 329 LDHB L-lactate dehydrogenase B chain yes yes 2 0.00071461 130.75 By MS/MS By MS/MS 1 1 21601000 11267000 10334000 5144 1649 5850 12888;12889 12523;12524 12523 2 SADTLWGIQK EEEARLKKSADTLWGI DTLWGIQKELQF____ K S A Q K E 1 0 0 1 0 1 0 1 0 1 1 1 0 0 0 1 1 1 0 0 0 0 10 0 1117.5768 P00338 P00338 319 328 LDHA L-lactate dehydrogenase A chain yes yes 2 5.0928E-05 152.47 By MS/MS By MS/MS 1 1 11532000 5910000 5621800 5145 1621 5851 12890;12891 12525;12526 12526 2 SAEPSANTTLVSETEEEGSVPAFGAAAK LSGKSPRKSAEPSANT PAFGAAAKPGMVSAGQ K S A A K P 6 0 1 0 0 0 5 2 0 0 1 1 0 1 2 4 3 0 0 2 0 0 28 0 2749.293 J3KQ96;E7ETY2;Q13428 J3KQ96 160 187 TCOF1 Treacle protein no no 2;3;4 0.0015918 71.002 By MS/MS By MS/MS 2 3 1007600000 543980000 463640000 5146 822;2059 5852 12892;12893;12894;12895;12896 12527;12528;12529;12530 12530 1503;7088 3 SAEPSPTVMSTSLGSNLSELDR YSFPNKQKSAEPSPTV SNLSELDRLLLELNAV K S A D R L 1 1 1 1 0 0 2 1 0 0 3 0 1 0 2 6 2 0 0 1 0 0 22 0 2277.0795 F5GZ78;A0A1B0GTU4;P49023;F5H836;A0A1B0GU60 F5GZ78 124 145 PXN Paxillin yes no 3 0.022209 40.622 By MS/MS By matching 1 1 10576000 6909000 3666900 5147 414 5853 12897;12898 12531 12531 162 767 1 SAESPTSPVTSETGSTFK KQEKEPSKSAESPTSP SETGSTFKKFFTQGWA K S A F K K 1 0 0 0 0 0 2 1 0 0 0 1 0 1 2 5 4 0 0 1 0 0 18 0 1811.8425 Q02952 Q02952 280 297 AKAP12 A-kinase anchor protein 12 yes yes 2 1.5016E-09 137.09 By MS/MS By MS/MS 2 2 90476000 12951000 77526000 5148 1991 5854;5855 12899;12900;12901;12902 12532;12533;12534;12535 12533 3829;3830;7519 4 SAESPTSPVTSETGSTFKK KQEKEPSKSAESPTSP ETGSTFKKFFTQGWAG K S A K K F 1 0 0 0 0 0 2 1 0 0 0 2 0 1 2 5 4 0 0 1 0 0 19 1 1939.9375 Q02952 Q02952 280 298 AKAP12 A-kinase anchor protein 12 yes yes 2;3 0.00025515 118.76 By MS/MS By MS/MS 2 2 112360000 63495000 48861000 5149 1991 5856 12903;12904;12905;12906 12536;12537 12537 3829;3830;7519 2 SAFSNLFGGEPLSYTR ________________ GEPLSYTRFSLARQVD R S A T R F 1 1 1 0 0 0 1 2 0 0 2 0 0 2 1 3 1 0 1 0 0 0 16 0 1744.842 F8WBE5;P02786 F8WBE5 7 22 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 2 4.6927E-63 193.11 By MS/MS By MS/MS 1 1 35239000 19901000 15338000 5150 1047 5857 12907;12908 12538;12539 12538 1983;8141 2 SAFTPATATGSSPSPVLGQGEK SAGQLRQRSAFTPATA PVLGQGEKVEGLQAQA R S A E K V 3 0 0 0 0 1 1 3 0 0 1 1 0 1 3 4 3 0 0 1 0 0 22 0 2089.0328 F8W7U0;Q15811;CON__ENSEMBL:ENSBTAP00000001528 F8W7U0 891 912 ITSN1 Intersectin-1 yes no 2;3 3.6608E-08 111.22 By MS/MS By MS/MS 1 2 26605000 9134100 17470000 + 5151 1037 5858 12909;12910;12911 12540;12541;12542 12542 1956 2 SAFTPATATGSSPSPVLGQGEKVEGLQAQALYPWR SAGQLRQRSAFTPATA AQALYPWRAKKDNHLN R S A W R A 5 1 0 0 0 3 2 4 0 0 3 1 0 1 4 4 3 1 1 2 0 0 35 1 3600.8213 F8W7U0;Q15811;CON__ENSEMBL:ENSBTAP00000001528 F8W7U0 891 925 ITSN1 Intersectin-1 yes no 3 0.007095 47.537 By matching By MS/MS 1 1 84572000 34322000 50250000 + 5152 1037 5859 12912;12913 12543 12543 1956 1 SAGAPASVSGQDADGSTSPR EKLARELRSAGAPASV ADGSTSPRSQEP____ R S A P R S 4 1 0 2 0 1 0 3 0 0 0 0 0 0 2 5 1 0 0 1 0 0 20 0 1816.8187 K7EQY5;P42679 K7EQY5 483 502 MATK Non-specific protein-tyrosine kinase;Megakaryocyte-associated tyrosine-protein kinase yes no 2 0.010697 61.985 By MS/MS By matching 1 1 13321000 6858800 6461800 5153 1392 5860 12914;12915 12544 12544 2562 1 SAGEEEDGPVLTDEQK PSLDQWHRSAGEEEDG PVLTDEQKSRIQAMKP R S A Q K S 1 0 0 2 0 1 4 2 0 0 1 1 0 0 1 1 1 0 0 1 0 0 16 0 1702.7534 Q66PJ3;F5GYV5;H7BZV4;A0A0C4DG62;F8WCT1;F5H7X4 Q66PJ3 332 347 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 2;3 4.5138E-185 262.73 By MS/MS By MS/MS 2 2 628910000 233060000 395850000 5154 2290 5861 12916;12917;12918;12919 12545;12546;12547;12548;12549 12548 4612 4 SAGGSSPEGGEDSDREDGNYCPPVKR QKDKGQKRSAGGSSPE NYCPPVKRERTSSLTQ R S A K R E 1 2 1 3 1 0 3 5 0 0 0 1 0 0 3 4 0 0 1 1 0 0 26 2 2722.1525 B7Z7F3;Q9H6Z4;K7EID7;K7ENB9 B7Z7F3 28 53 RANBP3 Ran-binding protein 3 yes no 3 0.012619 55.705 By MS/MS By MS/MS 1 1 69211000 40586000 28625000 5155 591 5862 12920;12921 12550;12551 12551 1077;8085 2 SAINEVVTR GGEKKKGRSAINEVVT AINEVVTREYTINIHK R S A T R E 1 1 1 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 2 0 0 9 0 987.53491 P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;B8ZZK4 P62899 15 23 RPL31 60S ribosomal protein L31 yes no 2 0.011762 85.862 By MS/MS By matching 1 1 13927000 7321400 6605500 5156 1948 5863 12922;12923 12552 12552 1 SAKPETVIDSLLQ PKTGRRKRSAKPETVI TVIDSLLQ________ R S A L Q - 1 0 0 1 0 1 1 0 0 1 2 1 0 0 1 2 1 0 0 1 0 0 13 1 1399.7559 H7C2F6;J3KPF9;A0A087X011;E9PES4;Q9Y496 H7C2F6 173 185 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A yes no 2 6.0216E-10 145.52 By MS/MS By MS/MS 1 1 24937000 12917000 12020000 5157 151 5864 12924;12925 12553;12554 12554 6869 2 SAKSGSEASASASKDALQAMILSLPR SSSSTSTKSAKSGSEA AMILSLPRYHCENPAS K S A P R Y 6 1 0 1 0 1 1 1 0 1 3 2 1 0 1 7 0 0 0 0 0 0 26 2 2575.3276 A0A0G2JLG2;Q9UPP2 A0A0G2JLG2 606 631 IQSEC3 IQ motif and SEC7 domain-containing protein 3 yes no 3 0.020404 41.166 By matching By MS/MS 1 1 14194000 5687400 8506600 5158 355 5865 12926;12927 12555 12555 635;636;637;638 1 SALLTQNGTGSLPR LGRSPSPKSALLTQNG NGTGSLPRNLAATLQD K S A P R N 1 1 1 0 0 1 0 2 0 0 3 0 0 0 1 2 2 0 0 0 0 0 14 0 1413.7576 Q86UU1;A0A087WZL0 Q86UU1 1007 1020 PHLDB1 Pleckstrin homology-like domain family B member 1 yes no 2 0.00034916 116 By matching By MS/MS 1 2 27153000 9213400 17939000 5159 2404 5866;5867 12928;12929;12930 12556;12557 12556 115 4907 2 SALNLNQPVSVSSVSPVK PVPAQKLKSALNLNQP VSSVSPVKATQKSKDK K S A V K A 1 0 2 0 0 1 0 0 0 0 2 1 0 0 2 5 0 0 0 4 0 0 18 0 1824.9945 H0YIT6;G3V1N3;Q86XJ1 H0YIT6 253 270 GAS2L3 GAS2-like protein 3 yes no 2 0.0010298 91.926 By MS/MS By matching 1 1 11799000 6520500 5278800 5160 1064 5868 12931;12932 12558 12558 2010 1 SALSPSKSPAK TGFNFSFKSALSPSKS SPSKSPAKLNQSGTSV K S A A K L 2 0 0 0 0 0 0 0 0 0 1 2 0 0 2 4 0 0 0 0 0 0 11 1 1071.5924 P49792;Q7Z3J3 P49792 2273 2283 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 yes no 2 0.00082578 113.07 By MS/MS By MS/MS 2 2 60600000 33235000 27365000 5161 1860 5869;5870 12933;12934;12935;12936 12559;12560;12561;12562 12562 3607;3608 4 SAMDSPVPASMFAPEPSSPGAAR ________________ PSSPGAARAAAAAARL R S A A R A 5 1 0 1 0 0 1 1 0 0 0 0 2 1 5 5 0 0 0 1 0 0 23 0 2259.03 O00178;F8WAZ4 O00178 8 30 GTPBP1 GTP-binding protein 1 yes no 2;3 8.9885E-48 178.73 By MS/MS By MS/MS 9 10 429910000 215520000 214400000 5162 1427 5871;5872;5873 12937;12938;12939;12940;12941;12942;12943;12944;12945;12946;12947;12948;12949;12950;12951;12952;12953;12954;12955 12563;12564;12565;12566;12567;12568;12569;12570;12571;12572;12573;12574;12575;12576;12577;12578;12579;12580 12576 501;502 2622;2623 18 SAMPFTASPASSTTAR HIGSAHNRSAMPFTAS PASSTTARVITNQYNN R S A A R V 4 1 0 0 0 0 0 0 0 0 0 0 1 1 2 4 3 0 0 0 0 0 16 0 1581.7457 O00151 O00151 123 138 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.0031672 79.013 By MS/MS By MS/MS 1 1 21453000 9204200 12249000 5163 1426 5874 12956;12957 12581;12582 12582 2618 2 SANAFLTPSYTWTPLK QVTPMTPRSANAFLTP SYTWTPLKTEVDESQA R S A L K T 2 0 1 0 0 0 0 0 0 0 2 1 0 1 2 2 3 1 1 0 0 0 16 0 1795.9145 Q15398 Q15398 332 347 DLGAP5 Disks large-associated protein 5 yes yes 2 0.0025777 82.007 By MS/MS 1 4091300 4091300 0 5164 2137 5875 12958 12583 12583 4236 1 SANPTRPSSPVTSHISK SPLRSPIRSANPTRPS PVTSHISKVLFGEDDS R S A S K V 1 1 1 0 0 0 0 0 1 1 0 1 0 0 3 5 2 0 0 1 0 0 17 1 1764.9119 F8W6N3;Q92560;H0Y8E8 F8W6N3 495 511 BAP1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase BAP1 yes no 3 0.0094101 58.671 By MS/MS By MS/MS 1 1 28251000 17182000 11069000 5165 1034 5876 12959;12960 12584;12585 12584 1939;1940 2 SAPASPNHAGVLSAHSSGAQTPESLSR PLGPLSSRSAPASPNH QTPESLSREGSPAPLE R S A S R E 5 1 1 0 0 1 1 2 2 0 2 0 0 0 3 7 1 0 0 1 0 0 27 0 2615.2688 Q01167 Q01167 369 395 FOXK2 Forkhead box protein K2 yes yes 3 0.00031944 68.249 By MS/MS 1 30729000 0 30729000 5166 1979 5877 12961 12586;12587 12587 3798;3799;3800;7514 2 SAPASPTHPGLMSPR PFGPLSSRSAPASPTH HPGLMSPRSGGLQTPE R S A P R S 2 1 0 0 0 0 0 1 1 0 1 0 1 0 4 3 1 0 0 0 0 0 15 0 1504.7456 P85037 P85037 416 430 FOXK1 Forkhead box protein K1 yes yes 2;3 0.00018468 95.205 By MS/MS By MS/MS 4 4 205950000 102810000 103130000 5167 1968 5878;5879 12962;12963;12964;12965;12966;12967;12968;12969 12588;12589;12590;12591;12592;12593;12594;12595;12596;12597;12598 12594 775 3760;3761;3762;7509 11 SAPTSPTATNISSK PPRKNCHKSAPTSPTA TATNISSKTIPVKSPN K S A S K T 2 0 1 0 0 0 0 0 0 1 0 1 0 0 2 4 3 0 0 0 0 0 14 0 1360.6834 H0YN99;Q9H792;H3BUZ5 H0YN99 568 581 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.0014432 90.853 By MS/MS By matching 1 1 19807000 10885000 8922400 5168 1218 5880 12970;12971 12599 12599 2277 1 SAPWNSFLPPPPPMPGPR KSDNIKPKSAPWNSFL PPPMPGPRLGPGKPGL K S A P R L 1 1 1 0 0 0 0 1 0 0 1 0 1 1 8 2 0 1 0 0 0 0 18 0 1943.9716 B4DP61;E7EQZ4;Q16637;H0YBZ9;A0A0G2JRX5;A0A0G2JRY6 B4DP61 120 137 SMN2;SMN1 Survival motor neuron protein yes no 2 0.0019977 69.331 By MS/MS 1 4622200 0 4622200 5169 554 5881 12972 12600 12600 220 1030 1 SAQGSSSPVPSMVQK VLPSPSGRSAQGSSSP PVPSMVQKSPRITPPA R S A Q K S 1 0 0 0 0 2 0 1 0 0 0 1 1 0 2 5 0 0 0 2 0 0 15 0 1488.7242 P35658;A0A0A0MSW3 P35658 651 665 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.00041937 112.96 By matching By MS/MS 1 1 18868000 9412600 9455200 5170 1801 5882 12973;12974 12601 12601 3403 1 SAQIWSLASPLR WMGTGALRSAQIWSLA WSLASPLRSSSALGDH R S A L R S 2 1 0 0 0 1 0 0 0 1 2 0 0 0 1 3 0 1 0 0 0 0 12 0 1327.7248 P59923;A0A087X0J9 P59923 163 174 ZNF445 Zinc finger protein 445 yes no 2 0.024456 62.633 By MS/MS 1 2296000 0 2296000 5171 1925 5883 12975 12602 12602 3717 1 SAQWLDQEEAPK ILYDNRRRSAQWLDQE LDQEEAPKHFPKPILH R S A P K H 2 0 0 1 0 2 2 0 0 0 1 1 0 0 1 1 0 1 0 0 0 0 12 0 1400.6572 Q53H47 Q53H47 508 519 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase yes yes 2 0.0012058 94.673 By MS/MS By MS/MS 1 1 20086000 11415000 8670500 5172 2204 5884 12976;12977 12603;12604 12604 4414 2 SASADNLTLPR LRRSARKRSASADNLT ADNLTLPRWSPAIIS_ R S A P R W 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 2 1 0 0 0 0 0 11 0 1143.5884 Q8ND76 Q8ND76 324 334 CCNY Cyclin-Y yes yes 2 2.1217E-09 153.81 By MS/MS By MS/MS 1 1 60846000 30307000 30539000 5173 2507 5885 12978;12979 12605;12606;12607;12608;12609 12606 5120 5 SASASHQADIK RPPKSARRSASASHQA ASHQADIKEARREVEV R S A I K E 3 0 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1113.5415 C9JXK0;Q14739 C9JXK0 97 107 LBR Lamin-B receptor yes no 2 0.00014028 116.9 By MS/MS By MS/MS 1 1 105970000 61520000 44447000 5174 700 5886 12980;12981 12610;12611;12612 12612 1295;1296 3 SASDLSEDLFK KDKDLNSKSASDLSED DLSEDLFKVHDFDVKI K S A F K V 1 0 0 2 0 0 1 0 0 0 2 1 0 1 0 3 0 0 0 0 0 0 11 0 1210.5717 Q92541 Q92541 650 660 RTF1 RNA polymerase-associated protein RTF1 homolog yes yes 2 0.010583 113.24 By MS/MS 2 0 0 0 5175 2581 5887 12982;12983 12613;12614 12613 5298;5299 2 SASFNTDPYVR EEISKLMRSASFNTDP FNTDPYVREFGIMVKD R S A V R E 1 1 1 1 0 0 0 0 0 0 0 0 0 1 1 2 1 0 1 1 0 0 11 0 1255.5833 Q9UKV8 Q9UKV8 385 395 AGO2 Protein argonaute-2 yes yes 2 0.016115 68.171 By MS/MS By matching 1 1 18689000 7125200 11564000 5176 3031 5888 12984;12985 12615 12615 6386 1 SASITNLSLDR GKSPARNRSASITNLS ITNLSLDRSGSPMVPS R S A D R S 1 1 1 1 0 0 0 0 0 1 2 0 0 0 0 3 1 0 0 0 0 0 11 0 1175.6146 E9PDH4;Q9Y2I7 E9PDH4 305 315 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes no 2 1.2786E-05 133.98 By MS/MS By MS/MS 1 1 62980000 32746000 30234000 5177 853 5889 12986;12987 12616;12617 12616 1585 2 SASLGSQQLLGLPR DTHFLHLRSASLGSQQ QQLLGLPRDPGSSVSG R S A P R D 1 1 0 0 0 2 0 2 0 0 4 0 0 0 1 3 0 0 0 0 0 0 14 0 1425.794 Q8IZJ1 Q8IZJ1 526 539 UNC5B Netrin receptor UNC5B yes yes 2 0.015776 67.846 By matching By MS/MS 1 1 12917000 6542800 6373800 5178 2448 5890 12988;12989 12618 12618 5004 1 SASPDDDLGSSNWEAADLGNEER SHPHGVKRSASPDDDL ADLGNEERKQKFLRLM R S A E R K 3 1 2 4 0 0 3 2 0 0 2 0 0 0 1 4 0 1 0 0 0 0 23 0 2434.0157 E9PM92;E9PQA1;O00193 O00193 15 37 C11orf58;SMAP Small acidic protein no no 2;3 8.6618E-12 138.66 By MS/MS By MS/MS 4 5 4121100000 1909600000 2211500000 5179 910;1428 5891;5892 12990;12991;12992;12993;12994;12995;12996;12997;12998 12619;12620;12621;12622;12623;12624;12625;12626;12627 12620 38 1687;1688 9 SASPDDDLGSSNWEAADLGNEERK SHPHGVKRSASPDDDL DLGNEERKQKFLRLMG R S A R K Q 3 1 2 4 0 0 3 2 0 0 2 1 0 0 1 4 0 1 0 0 0 0 24 1 2562.1106 E9PM92;E9PQA1;O00193 O00193 15 38 C11orf58;SMAP Small acidic protein no no 2;3 2.2325E-13 139.16 By MS/MS By MS/MS 2 2 476650000 249430000 227220000 5180 910;1428 5893 12999;13000;13001;13002 12628;12629;12630;12631 12628 1687;1688 4 SASPHDVDLCLVSPCEFEHR LRGPRARRSASPHDVD SPCEFEHRKAVPMAPA R S A H R K 1 1 0 2 2 0 2 0 2 0 2 0 0 1 2 3 0 0 0 2 0 0 20 0 2354.042 Q66K74 Q66K74 729 748 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3 0.00040689 78.352 By MS/MS By MS/MS 2 2 34915000 13462000 21453000 5181 2289 5894;5895 13003;13004;13005;13006 12632;12633;12634;12635 12634 4609;4610 4 SASPYPSHSLSSPQR TLTPPLRRSASPYPSH HSLSSPQRKQSPPRHR R S A Q R K 1 1 0 0 0 1 0 0 1 0 1 0 0 0 3 6 0 0 1 0 0 0 15 0 1599.7641 Q5T200 Q5T200 370 384 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 0.0075194 65.47 By MS/MS By MS/MS 1 1 149830000 75981000 73852000 5182 2238 5896 13007;13008 12636;12637 12637 4480;4481;4482 2 SASQSSLDKLDQELK DTEGSKQRSASQSSLD DKLDQELKEQQKELKN R S A L K E 1 0 0 2 0 2 1 0 0 0 3 2 0 0 0 4 0 0 0 0 0 0 15 1 1647.8315 O60271;A0A087X2D8 O60271 728 742 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2;3 2.9843E-26 166.9 By MS/MS By MS/MS 5 5 710130000 389570000 320560000 5183 1514 5897;5898 13009;13010;13011;13012;13013;13014;13015;13016;13017;13018 12638;12639;12640;12641;12642;12643;12644;12645;12646;12647 12641 2855;2856;2857 10 SASSDTSEELNSQDSPPK SPRPALVRSASSDTSE NSQDSPPKQDSTAPSS R S A P K Q 1 0 1 2 0 1 2 0 0 0 1 1 0 0 2 6 1 0 0 0 0 0 18 0 1877.8127 J3QRP6;O14745 J3QRP6 169 186 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 2 4.4649E-44 180.93 By MS/MS By MS/MS 1 1 30862000 15650000 15212000 5184 1354 5899 13019;13020 12648;12649 12649 2503 2 SASSGAEGDVSSEREP NTPRKEDRSASSGAEG DVSSEREP________ R S A E P - 2 1 0 1 0 0 3 2 0 0 0 0 0 0 1 5 0 0 0 1 0 0 16 1 1563.6649 Q8TEA8 Q8TEA8 194 209 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 2 1.4545E-41 173.77 By MS/MS By MS/MS 2 2 179710000 96545000 83163000 5185 2542 5900 13021;13022;13023;13024 12650;12651;12652;12653 12652 5191;5192;5193 4 SASSGLGEFNAR CERPGRGRSASSGLGE GLGEFNARAREVELEH R S A A R A 2 1 1 0 0 0 1 2 0 0 1 0 0 1 0 3 0 0 0 0 0 0 12 0 1194.5629 Q86YS3 Q86YS3 525 536 RAB11FIP4 Rab11 family-interacting protein 4 yes yes 2 0.0008104 101.39 By matching By MS/MS 1 1 10840000 5082600 5757900 5186 2421 5901 13025;13026 12654 12654 4945 1 SASSNSAEAGGDTVTLDDILSLK ITSPNIRRSASSNSAE LDDILSLKSGPPEGGS R S A L K S 3 0 1 3 0 0 1 2 0 1 3 1 0 0 0 5 2 0 0 1 0 0 23 0 2250.0863 Q9UGU0 Q9UGU0 1367 1389 TCF20 Transcription factor 20 yes yes 2 0.0094141 72.227 By MS/MS By matching 1 1 12156000 7883000 4272700 5187 3001 5902 13027;13028 12655 12655 6314 0 SASSVEGPGGALYAR PASSDSERSASSVEGP PGGALYARVARREARP R S A A R V 3 1 0 0 0 0 1 3 0 0 1 0 0 0 1 3 0 0 1 1 0 0 15 0 1420.6947 A0A096LNX8;Q96GP6 A0A096LNX8 616 630 SCARF2 Scavenger receptor class F member 2 yes no 2 8.1658E-07 130.1 By MS/MS By MS/MS 1 1 20297000 11842000 8454700 5188 180 5903 13029;13030 12656;12657 12656 8005 2 SASSYSDIEEIATPDSSAPSSPK FSIKKGPKSASSYSDI SSAPSSPKLQHGSTET K S A P K L 3 0 0 2 0 0 2 0 0 2 0 1 0 0 3 8 1 0 1 0 0 0 23 0 2325.0496 A0A0A0MRJ3;Q8NEY1 A0A0A0MRJ3 1186 1208 NAV1 Neuron navigator 1 yes no 3 0.0035907 57.058 By MS/MS 1 4825800 4825800 0 5189 219 5904 13031 12658;12659 12659 382;383 2 SASTDLGTADVVLGR RGKRQALKSASTDLGT TADVVLGRVLEVTDLP K S A G R V 2 1 0 2 0 0 0 2 0 0 2 0 0 0 0 2 2 0 0 2 0 0 15 0 1460.7471 A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H7C0E9 A0A0U1RRA6 843 857 R3HDM2 R3H domain-containing protein 2 yes no 2 1.2147E-22 162.88 By MS/MS By MS/MS 1 1 43946000 23087000 20858000 5190 395 5905 13032;13033 12660;12661 12661 725 2 SASTEKLEQGTSALIR ESKTANKRSASTEKLE QGTSALIRQMPLSSAG R S A I R Q 2 1 0 0 0 1 2 1 0 1 2 1 0 0 0 3 2 0 0 0 0 0 16 1 1689.8897 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 183 198 MAP7D3 MAP7 domain-containing protein 3 yes no 2;3 6.782E-16 147.7 By MS/MS By MS/MS 2 2 228850000 122060000 106790000 5191 226 5906 13034;13035;13036;13037 12662;12663;12664;12665;12666 12663 403;6896 5 SASVSSISLTK HSSPFHSRSASVSSIS VSSISLTKGTDEVPVP R S A T K G 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 5 1 0 0 1 0 0 11 0 1078.587 G5E9C8;Q07889 G5E9C8 1117 1127 SOS1 Son of sevenless homolog 1 yes no 2 0.00055698 108.23 By MS/MS By MS/MS 2 2 69837000 37335000 32501000 5192 1099 5907;5908 13038;13039;13040;13041 12667;12668;12669;12670 12670 2076;2077 4 SASWGSADQLK AEKRSHQRSASWGSAD WGSADQLKEQIAKLRQ R S A L K E 2 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 0 1 0 0 0 0 11 0 1148.5462 Q86VQ1;H7C0Q2 Q86VQ1 221 231 GLCCI1 Glucocorticoid-induced transcript 1 protein yes no 2 0.0021157 94.309 By MS/MS By MS/MS 1 1 77721000 41462000 36259000 5193 2409 5909 13042;13043 12671;12672 12672 4912 2 SASWGSTDQLK KKKGSHKRSASWGSTD WGSTDQLKEIAKLRQQ R S A L K E 1 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 1 1 0 0 0 0 11 0 1178.5568 Q6P1L5 Q6P1L5 271 281 FAM117B Protein FAM117B yes yes 2 0.00054068 111.94 By MS/MS By MS/MS 1 1 102730000 53260000 49473000 5194 2315 5910 13044;13045 12673;12674 12674 4668 2 SASYPCAAPR RAPQSIPRSASYPCAA SYPCAAPRPGAPETTA R S A P R P 3 1 0 0 1 0 0 0 0 0 0 0 0 0 2 2 0 0 1 0 0 0 10 0 1078.4866 Q7Z3C6;H7C152 Q7Z3C6 759 768 ATG9A Autophagy-related protein 9A yes no 2 0.019057 86.463 By MS/MS By MS/MS 1 1 14543000 8258000 6285000 5195 2376 5911 13046;13047 12675;12676 12676 4826 0 SASYPCAAPRPGAPETTALHGGFQR RAPQSIPRSASYPCAA ALHGGFQRRYGGITDP R S A Q R R 5 2 0 0 1 1 1 3 1 0 1 0 0 1 4 2 2 0 1 0 0 0 25 1 2598.2398 Q7Z3C6;H7C152 Q7Z3C6 759 783 ATG9A Autophagy-related protein 9A yes no 3 0.014044 47.75 By matching By MS/MS 1 1 50384000 23922000 26462000 5196 2376 5912 13048;13049 12677 12677 4826 1 SATDGNTSTTPPTSAK AAAAQEVRSATDGNTS TTPPTSAKKRKLNSSS R S A A K K 2 0 1 1 0 0 0 1 0 0 0 1 0 0 2 3 5 0 0 0 0 0 16 0 1534.7111 K4DI93;Q13620 K4DI93 27 42 CUL4B Cullin-4B yes no 2 0.00025265 116.03 By MS/MS By MS/MS 1 1 53154000 29106000 24048000 5197 1364 5913 13050;13051 12678;12679 12679 7260;7261 2 SATFPNAGPR KMNTAEFKSATFPNAG TFPNAGPRHLLDDSVM K S A P R H 2 1 1 0 0 0 0 1 0 0 0 0 0 1 2 1 1 0 0 0 0 0 10 0 1016.5039 Q86X27 Q86X27 359 368 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes yes 2 0.017205 79.036 By MS/MS By matching 1 1 45745000 25663000 20082000 5198 2415 5914 13052;13053 12680 12680 1 SATPVNCEQPDILVSSTPINEGQTVLDK AEMEESGRSATPVNCE EGQTVLDKVAEQCEPA R S A D K V 1 0 2 2 1 2 2 1 0 2 2 1 0 0 3 3 3 0 0 3 0 0 28 0 3011.4757 F8WF45;P82094 F8WF45 399 426 TMF1 TATA element modulatory factor yes no 3 5.0015E-05 74.408 By MS/MS 1 34610000 0 34610000 5199 1058 5915 13054 12681 12681 2001 1 SATRPSPSPERSSTGPEPPAPTPLLAER KDKDKKEKSATRPSPS PTPLLAERHGGSPQPL K S A E R H 3 3 0 0 0 0 3 1 0 0 2 0 0 0 8 5 3 0 0 0 0 0 28 2 2884.4679 Q9UQ35;I3L4D8;I3L182;I3L1I8 Q9UQ35 346 373 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.00053371 66.793 By MS/MS By MS/MS 1 1 178940000 84176000 94767000 5200 3074 5916 13055;13056 12682;12683 12682 6562;6563;6564;6565;7932 2 SAVQKPPSTGSAPAIESVD EAEPKSQRSAVQKPPS APAIESVD________ R S A V D - 3 0 0 1 0 1 1 1 0 1 0 1 0 0 3 4 1 0 0 2 0 0 19 1 1839.9214 Q9NUQ3 Q9NUQ3 510 528 TXLNG Gamma-taxilin yes yes 2 0.0029278 82.483 By MS/MS By matching 1 1 15261000 8116100 7145000 5201 2921 5917 13057;13058 12684 12684 6172 1 SAVRPASLNLNR VHYATMARSAVRPASL PASLNLNRSRSLSNSN R S A N R S 2 2 2 0 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 12 1 1296.7262 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 882 893 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.010846 78.814 By MS/MS By matching 1 1 85711000 33230000 52482000 5202 2689 5918 13059;13060 12685 12685 5550 1 SAVSPDLHITPIYEGR SQLGQDLRSAVSPDLH ITPIYEGRTYYSPVYR R S A G R T 1 1 0 1 0 0 1 1 1 2 1 0 0 0 2 2 1 0 1 1 0 0 16 0 1753.8999 Q99569;A0A0D9SF60 Q99569 403 418 PKP4 Plakophilin-4 yes no 2 2.1251E-06 126.32 By MS/MS By MS/MS 2 2 47995000 26866000 21128000 5203 2726 5919;5920 13061;13062;13063;13064 12686;12687;12688;12689;12690 12687 5658;8441 5 SAYPPPAPAYALSSPR YNSYYPNRSAYPPPAP AYALSSPRGGTPGSGA R S A P R G 4 1 0 0 0 0 0 0 0 0 1 0 0 0 5 3 0 0 2 0 0 0 16 0 1643.8308 O14497 O14497 220 235 ARID1A AT-rich interactive domain-containing protein 1A yes yes 3 0.02173 57.39 By matching By MS/MS 1 1 4570700 1239000 3331700 5204 1448 5921 13065;13066 12691 12691 2665 0 SAYQEYDSDSDVPEELKR YESDEQEKSAYQEYDS DVPEELKRDYVDEQTG K S A K R D 1 1 0 3 0 1 3 0 0 0 1 1 0 0 1 3 0 0 2 1 0 0 18 1 2129.9389 H0Y7Q2;Q96JG6 H0Y7Q2 339 356 CCDC132 Coiled-coil domain-containing protein 132 yes no 2;3 0.00090292 85.51 By MS/MS By MS/MS 2 2 68978000 38480000 30498000 5205 1140 5922 13067;13068;13069;13070 12692;12693;12694 12693 2165;2166 3 SAYQTIDSAEAPADPFAVPEGR FLGSSQDRSAYQTIDS PFAVPEGRSQDARGY_ R S A G R S 5 1 0 2 0 1 2 1 0 1 0 0 0 1 3 2 1 0 1 1 0 0 22 0 2291.0706 Q6RW13 Q6RW13 131 152 AGTRAP Type-1 angiotensin II receptor-associated protein yes yes 2;3 1.2965E-25 161.2 By MS/MS By MS/MS 2 2 46603000 21505000 25097000 5206 2334 5923 13071;13072;13073;13074 12695;12696;12697 12697 8378 3 SCAHDWVYE PEELVDYKSCAHDWVY CAHDWVYE________ K S C Y E - 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 1 0 1 1 1 0 0 9 0 1165.4499 Q32Q12;P22392;O60361 Q32Q12 284 292 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase yes no 2 0.0086457 86.794 By MS/MS By MS/MS 1 1 6034100 3073600 2960400 5207 1748 5924 13075;13076 12698;12699 12699 8244 2 SCDEPLTPPPHSPTSMLQLIHDPVSPR AKVLRPLRSCDEPLTP IHDPVSPRGMVTRSSP R S C P R G 0 1 0 2 1 1 1 0 2 1 3 0 1 0 7 4 2 0 0 1 0 0 27 0 3007.4532 I3VM54;Q9Y2K7 I3VM54 690 716 KDM2A Lysine-specific demethylase 2A yes no 3 0.0014293 58.728 By MS/MS By MS/MS 1 2 31986000 13930000 18057000 5208 1315 5925 13077;13078;13079 12700;12701 12701 469 2442;2443;7244;7245 2 SCDSPLNLK LTCKVCGKSCDSPLNL CDSPLNLKTHFRTHGM K S C L K T 0 0 1 1 1 0 0 0 0 0 2 1 0 0 1 2 0 0 0 0 0 0 9 0 1032.491 Q8N1G0 Q8N1G0 1208 1216 ZNF687 Zinc finger protein 687 yes yes 2 0.0048116 97.452 By MS/MS By matching 1 1 8548800 3792800 4756000 5209 2458 5926 13080;13081 12702;12703 12703 5027 2 SCFESSPDPELK QSVTPQRRSCFESSPD SSPDPELKSRTPSRHS R S C L K S 0 0 0 1 1 0 2 0 0 0 1 1 0 1 2 3 0 0 0 0 0 0 12 0 1394.6024 Q9UQ35;I3L4D8;I3L182 Q9UQ35 871 882 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 1;2;3 8.9771E-26 172.76 By MS/MS By MS/MS 4 5 2240500000 1080700000 1159900000 5210 3074 5927;5928 13082;13083;13084;13085;13086;13087;13088;13089;13090 12704;12705;12706;12707;12708;12709;12710;12711 12704 6551;6552;6553 8 SCFSWSGGLGDFSR PPTLGTLRSCFSWSGG GGLGDFSRTPSPSPST R S C S R T 0 1 0 1 1 0 0 3 0 0 1 0 0 2 0 4 0 1 0 0 0 0 14 0 1561.662 Q9UQ84;H0YAZ2 Q9UQ84 607 620 EXO1 Exonuclease 1 yes no 2 0.0015376 106.14 By MS/MS 1 4935100 0 4935100 5211 3076 5929 13091 12712 12712 6610 1 SCMNQVTISTTDRRNNK KLGYQWKKSCMNQVTI TTDRRNNKLIFKVNLL K S C N K L 0 2 3 1 1 1 0 0 0 1 0 1 1 0 0 2 3 0 0 1 0 0 17 2 2023.9528 E7EPP6;O14757;A0A087WY91 E7EPP6 423 439 CHEK1 Serine/threonine-protein kinase Chk1 yes no 3 0.02284 49.621 By MS/MS 1 10715000 10715000 0 5212 803 5930 13092 12713 12713 299 1 SCNCLLLK IAKAVNEKSCNCLLLK SCNCLLLKVNQIGSVT K S C L K V 0 0 1 0 2 0 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 8 0 1006.494 P06733 P06733 336 343 ENO1 Alpha-enolase yes yes 2 0.02732 82.241 By MS/MS By matching 1 1 10329000 4788600 5539900 5213 1646 5931 13093;13094 12714 12714 1 SCSDTALNAIVAK SPGHVVRKSCSDTALN ALNAIVAKDPASRHAG K S C A K D 3 0 1 1 1 0 0 0 0 1 1 1 0 0 0 2 1 0 0 1 0 0 13 0 1348.6657 Q86X02 Q86X02 316 328 CDR2L Cerebellar degeneration-related protein 2-like yes yes 2 0.0015636 90.149 By MS/MS By MS/MS 1 1 8649500 4369100 4280400 5214 2413 5932 13095;13096 12715;12716 12715 4923;4924 2 SCSIDRSPGAGSLGSPASQR ARQKPVLRSCSIDRSP LGSPASQRKDLGRSES R S C Q R K 2 2 0 1 1 1 0 3 0 1 1 0 0 0 2 6 0 0 0 0 0 0 20 1 1988.9334 E9PC47;P53667 E9PC47 326 345 LIMK1 LIM domain kinase 1 yes no 3 0.0034873 62.19 By matching By MS/MS 1 1 12091000 6045000 6045600 5215 846 5933 13097;13098 12717 12717 1576 1 SCSLVLEHQPDNIK DHYRAALRSCSLVLEH EHQPDNIKALFRKGKV R S C I K A 0 0 1 1 1 1 1 0 1 1 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1638.8036 U3KQI1;U3KQ64;A0A0A0MTJ1;Q14318 U3KQI1 15 28 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes no 2 0.0013323 91.789 By MS/MS By MS/MS 1 1 10915000 6727300 4187900 5216 274 5934 13099;13100 12718;12719 12719 481 2 SCSSLGCGSNGFRYLNYR CSLSCGSRSCSSLGCG GFRYLNYRIHTSPSQS R S C Y R I 0 2 2 0 2 0 0 3 0 0 2 0 0 1 0 4 0 0 2 0 0 0 18 1 2096.9156 Q3SY46 Q3SY46 116 133 KRTAP13-3 Keratin-associated protein 13-3 yes yes 2 0.0087261 69.485 By MS/MS 1 0 0 0 5217 2189 5935 13101 12720 12720 4363;4364;8359 1 SCSSPAVSAVSQLPLSPK VATTNEERSCSSPAVS SQLPLSPKETVESHDK R S C P K E 2 0 0 0 1 1 0 0 0 0 2 1 0 0 3 6 0 0 0 2 0 0 18 0 1813.9244 Q9Y2F5 Q9Y2F5 1888 1905 ICE1 Little elongation complex subunit 1 yes yes 2 0.0055522 67.668 By MS/MS By MS/MS 1 1 13616000 6865100 6750800 5218 3089 5936 13102;13103 12721;12722 12721 6631;6632 2 SCTPSPDQISHRASLEDAPVDDLTR SASASAERSCTPSPDQ APVDDLTRKFTYLGSQ R S C T R K 2 2 0 4 1 1 1 0 1 1 2 0 0 0 3 4 2 0 0 1 0 0 25 1 2766.2879 C9J6P4;Q7Z2W4 C9J6P4 271 295 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 3 0.013663 47.931 By matching By MS/MS 1 1 34254000 15443000 18812000 5219 642 5937 13104;13105 12723 12723 1196 1 SDAEEDGGTVSQEEEDR EKLEEKQKSDAEEDGG VSQEEEDRKPKAEEDE K S D D R K 1 1 0 3 0 1 5 2 0 0 0 0 0 0 0 2 1 0 0 1 0 0 17 0 1851.7242 P27824 P27824 554 570 CANX Calnexin yes yes 2 0.019092 61.524 By MS/MS By matching 1 1 14392000 7066300 7326000 5220 1769 5938 13106;13107 12724 12724 3334;3335;7417 1 SDAEEDGGTVSQEEEDRKPK EKLEEKQKSDAEEDGG EEEDRKPKAEEDEILN K S D P K A 1 1 0 3 0 1 5 2 0 0 0 2 0 0 1 2 1 0 0 1 0 0 20 2 2204.9669 P27824 P27824 554 573 CANX Calnexin yes yes 3 0.023857 57.499 By MS/MS By matching 1 1 65607000 30524000 35083000 5221 1769 5939 13108;13109 12725 12725 3334;3335;7417 1 SDAGLESDTAMKK ________________ ESDTAMKKGETLRKQT R S D K K G 2 0 0 2 0 0 1 1 0 0 1 2 1 0 0 2 1 0 0 0 0 0 13 1 1351.6289 Q9NR30 Q9NR30 7 19 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.018156 71.558 By matching By MS/MS 1 1 5852200 2898400 2953800 5222 2905 5940 13110;13111 12726 12726 1150 6124 0 SDGSDTTEQESTNLPSPNK ISDFSCSKSDGSDTTE TNLPSPNKSIRHEHLQ K S D N K S 0 0 2 2 0 1 2 1 0 0 1 1 0 0 2 4 3 0 0 0 0 0 19 0 2005.8712 Q68DQ2 Q68DQ2 442 460 CRYBG3 Very large A-kinase anchor protein yes yes 2 0.0092458 89.747 By MS/MS By MS/MS 1 1 21956000 13329000 8626900 5223 2296 5941 13112;13113 12727;12728 12728 4620 1 SDISPLTPR EGEKLSPKSDISPLTP DISPLTPRESSPLYSP K S D P R E 0 1 0 1 0 0 0 0 0 1 1 0 0 0 2 2 1 0 0 0 0 0 9 0 984.52401 P46821 P46821 1782 1790 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.010603 104.07 By MS/MS By MS/MS 1 1 23016000 12559000 10457000 5224 1840 5942 13114;13115 12729;12730 12730 7453 2 SDKSPDLAPTPAPQSTPR KAAKQEARSDKSPDLA PAPQSTPRNTVSQSIS R S D P R N 2 1 0 2 0 1 0 0 0 0 1 1 0 0 5 3 2 0 0 0 0 0 18 1 1863.9327 F8WAE5;Q9BY44 F8WAE5 498 515 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 2;3 2.2636E-15 148.06 By MS/MS By MS/MS 2 2 337700000 192990000 144710000 5225 1045 5943 13116;13117;13118;13119 12731;12732;12733;12734 12734 1981;1982 4 SDLLILDFGTFQLNSK QTGFHHEKSDLLILDF GTFQLNSKDQGLQKTT K S D S K D 0 0 1 2 0 1 0 1 0 1 4 1 0 2 0 2 1 0 0 0 0 0 16 0 1809.9513 Q709C8 Q709C8 711 726 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 2 0.0099885 69.672 By MS/MS 1 13024000 13024000 0 5226 2357 5944 13120 12735 12735 4777;4778 0 SDLLLEGFNNYR SGAGEHLKSDLLLEGF LEGFNNYRFLSNGYIP K S D Y R F 0 1 2 1 0 0 1 1 0 0 3 0 0 1 0 1 0 0 1 0 0 0 12 0 1439.7045 P35580 P35580 297 308 MYH10 Myosin-10 yes yes 2 0.0012331 109.29 By MS/MS 1 2714500 0 2714500 5227 1796 5945 13121 12736 12736 1 SDLNGLPSPVEER PVQTIIPRSDLNGLPS LPSPVEERCGDSPNSE R S D E R C 0 1 1 1 0 0 2 1 0 0 2 0 0 0 2 2 0 0 0 1 0 0 13 0 1411.6943 E7EWN3;Q9C0A6;C9JLA7 E7EWN3 84 96 SETD5 SET domain-containing protein 5 yes no 2 0.00096302 100.4 By MS/MS By matching 1 1 13179000 7360200 5819200 5228 836 5946 13122;13123 12737 12737 1561 1 SDNKDDDIDIDAI VPKVETVKSDNKDDDI DDIDIDAI________ K S D A I - 1 0 1 6 0 0 0 0 0 3 0 1 0 0 0 1 0 0 0 0 0 0 13 1 1447.6314 P55010 P55010 419 431 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.0079655 76.655 By MS/MS By MS/MS 1 1 6899900 3899400 3000500 5229 1905 5947 13124;13125 12738;12739 12738 0 SDPVDPDKEPEKEDVSASGPSPEATQLAK DGLSSQLKSDPVDPDK PEATQLAKQMELEQAV K S D A K Q 3 0 0 4 0 1 4 1 0 0 1 3 0 0 5 4 1 0 0 2 0 0 29 2 3022.4255 Q96T58 Q96T58 2139 2167 SPEN Msx2-interacting protein yes yes 3 0.0025983 60.172 By MS/MS 1 19118000 19118000 0 5230 2716 5948 13126 12740 12740 5636 1 SDPYHATSGALSPAK VKDRVKGKSDPYHATS SGALSPAKDCGSQKYA K S D A K D 3 0 0 1 0 0 0 1 1 0 1 1 0 0 2 3 1 0 1 0 0 0 15 0 1500.7209 P17302 P17302 244 258 GJA1 Gap junction alpha-1 protein yes yes 2 0.019752 64.534 By matching By MS/MS 1 1 5036900 2345300 2691600 5231 1716 5949 13127;13128 12741 12741 3227 1 SDSASSEPVGIYQGFEK VTQRASRRSDSASSEP GIYQGFEKKTGVAGED R S D E K K 1 0 0 1 0 1 2 2 0 1 0 1 0 1 1 4 0 0 1 1 0 0 17 0 1799.8214 Q05655 Q05655 302 318 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2 2.2544E-06 130.69 By MS/MS By MS/MS 2 2 47283000 24257000 23026000 5232 2004 5950 13129;13130;13131;13132 12742;12743;12744;12745 12742 3865;3866;8319 4 SDSEATISR RLGSLSARSDSEATIS DSEATISRSSASSRTA R S D S R S 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 3 1 0 0 0 0 0 9 0 964.44615 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1129 1137 CEP170 Centrosomal protein of 170 kDa yes no 2 0.010963 76.843 By MS/MS By MS/MS 1 1 20351000 10862000 9488700 5233 1112 5951 13133;13134 12746;12747 12746 2093;2094 2 SDSESEEEDLPVGEEVCKR LSTATGSRSDSESEEE VGEEVCKRGYLRKQKH R S D K R G 0 1 0 2 1 0 6 1 0 0 1 1 0 0 1 3 0 0 0 2 0 0 19 1 2192.9379 O14654 O14654 64 82 IRS4 Insulin receptor substrate 4 yes yes 3 0.017361 57.188 By MS/MS 1 6656900 0 6656900 5234 1453 5952 13135 12748 12748 2685;2686 1 SDSFENPVLQQHFR EKLRFTYRSDSFENPV PVLQQHFRNLEALALD R S D F R N 0 1 1 1 0 2 1 0 1 0 1 0 0 2 1 2 0 0 0 1 0 0 14 0 1702.8063 B1AHC9;P12956 B1AHC9 425 438 XRCC6 X-ray repair cross-complementing protein 6 yes no 3 0.00096283 82.774 By MS/MS By MS/MS 1 1 12809000 6582300 6227000 5235 518 5953 13136;13137 12749;12750;12751;12752 12751 974 4 SDSGGSSSEPFDR SGLVPRERSDSGGSSS SSSEPFDRHAPAMLRE R S D D R H 0 1 0 2 0 0 1 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 13 0 1326.5324 P48634 P48634 759 771 PRRC2A Protein PRRC2A yes yes 2 1.5279E-10 118.08 By matching By MS/MS 1 1 18479000 9383400 9096000 5236 1846 5954 13138;13139 12753 12753 3540 0 SDSLILDHQWELEK NLAGWRPRSDSLILDH DHQWELEKLSLLQEVE R S D E K L 0 0 0 2 0 1 2 0 1 1 3 1 0 0 0 2 0 1 0 0 0 0 14 0 1711.8417 Q12756;H7C3Y8 Q12756 1368 1381 KIF1A Kinesin-like protein KIF1A yes no 3 0.00639 61.524 By MS/MS By MS/MS 1 1 18636000 9333900 9301900 5237 2024 5955 13140;13141 12754;12755 12755 3928 2 SDSLLSFR PSEPGLRRSDSLLSFR SDSLLSFRLDLDLGPS R S D F R L 0 1 0 1 0 0 0 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 8 0 923.47125 Q00587 Q00587 190 197 CDC42EP1 Cdc42 effector protein 1 yes yes 2 0.010752 89.171 By MS/MS By MS/MS 1 1 51739000 29114000 22625000 5238 1974 5956 13142;13143 12756;12757 12757 3784 2 SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR VGAGALRRSDSPEIPF GNSFVGLRVVAKWSSN R S D L R V 4 1 1 3 0 1 1 4 0 1 2 0 0 2 4 6 0 0 0 1 0 0 31 0 3045.4316 Q12888;A6NNK5 Q12888 1460 1490 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 8.7434E-06 76.259 By matching By MS/MS 1 1 95810000 48598000 47212000 5239 2031 5957 13144;13145 12758 12758 3963;3964 1 SDSQASLTVPLSPQVVR KSTSVLSKSDSQASLT PLSPQVVRSKAVSHRT K S D V R S 1 1 0 1 0 2 0 0 0 0 2 0 0 0 2 4 1 0 0 3 0 0 17 0 1782.9476 Q8TEV9 Q8TEV9 487 503 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein yes yes 2 5.2479E-17 153.36 By MS/MS By MS/MS 2 2 30878000 16014000 14863000 5240 2547 5958;5959 13146;13147;13148;13149 12759;12760;12761 12760 5202;5203;5204 3 SDSRAQAVSEDAGGNEGR GEQARDERSDSRAQAV DAGGNEGRAAEAEPRA R S D G R A 3 2 1 2 0 1 2 3 0 0 0 0 0 0 0 3 0 0 0 1 0 0 18 1 1804.7936 P55884;C9JZG1 P55884 117 134 EIF3B Eukaryotic translation initiation factor 3 subunit B yes no 2 0.0078237 74.029 By MS/MS By matching 1 1 34236000 20857000 13380000 5241 1915 5960 13150;13151 12762 12762 3704;3705 1 SDSSGQEYSL TPSPRHKKSDSSGQEY SSGQEYSL________ K S D S L - 0 0 0 1 0 1 1 1 0 0 1 0 0 0 0 4 0 0 1 0 0 0 10 0 1071.4356 Q9Y597 Q9Y597 806 815 KCTD3 BTB/POZ domain-containing protein KCTD3 yes yes 2 0.0028203 89.561 By MS/MS 1 4242400 0 4242400 5242 3125 5961 13152 12763 12763 6696;6697 1 SDSSQPMLLR SPSTSLQRSDSSQPML SSQPMLLRVVGSQTSD R S D L R V 0 1 0 1 0 1 0 0 0 0 2 0 1 0 1 3 0 0 0 0 0 0 10 0 1132.5547 A0A087WV90;E9PDN5;A0A087WTU7;A0A075B6G3;P11532;E7EQR9;F5GZY3;E7EQS5;F8VX32;E7ESB2;H0Y304 A0A087WV90 3616 3625 DMD Dystrophin yes no 2 0.0020196 92.866 By MS/MS By MS/MS 2 2 47597000 29607000 17990000 5243 10 5962;5963 13153;13154;13155;13156 12764;12765;12766 12764 3 18 3 SDSVLPASHGHLPQAGSLER RSDPGWERSDSVLPAS PQAGSLERNRVGVSSK R S D E R N 2 1 0 1 0 1 1 2 2 0 3 0 0 0 2 4 0 0 0 1 0 0 20 0 2057.029 Q8N4C8 Q8N4C8 747 766 MINK1 Misshapen-like kinase 1 yes yes 3 0.010931 51.089 By MS/MS 1 4667200 0 4667200 5244 2471 5964 13157 12767 12767 5054 1 SDSYSQSLK MATCQPARSDSYSQSL DSYSQSLKSPLNDMSD R S D L K S 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 4 0 0 1 0 0 0 9 0 1013.4666 Q9H8W4 Q9H8W4 224 232 PLEKHF2 Pleckstrin homology domain-containing family F member 2 yes yes 2 0.023476 63.624 By matching By MS/MS 1 1 18931000 10275000 8656300 5245 2857 5965 13158;13159 12768 12768 6021 1 SDSYVELSQYR GGLLKALRSDSYVELS YVELSQYRDQHFRVRE R S D Y R D 0 1 0 1 0 1 1 0 0 0 1 0 0 0 0 3 0 0 2 1 0 0 11 0 1345.615 F8WE41;P52298 F8WE41 11 21 NCBP2 Nuclear cap-binding protein subunit 2 yes no 2 0.0054381 80.312 By matching By MS/MS 1 1 14748000 8818500 5929900 5246 1057 5966 13160;13161 12769 12769 1997 1 SDTDTGVCSGTDEDPDDKNAPFR QESLSSSKSDTDTGVC DDKNAPFRQRPFCKYK K S D F R Q 1 1 1 6 1 0 1 2 0 0 0 1 0 1 2 2 3 0 0 1 0 0 23 1 2498.014 Q5JSH3;H7BY83 Q5JSH3 574 596 WDR44 WD repeat-containing protein 44 yes no 3 0.00042683 76.573 By MS/MS 1 10423000 0 10423000 5247 2219 5967 13162 12770 12770 7635 1 SDTPEVHPPLPISQSPENESNDRR IQVLPEERSDTPEVHP ENESNDRRSRRYSVSE R S D R R S 0 2 2 2 0 1 3 0 1 1 1 0 0 0 5 4 1 0 0 1 0 0 24 1 2700.2739 Q03164;E9PR05 Q03164 504 527 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3 0.0023656 59.661 By MS/MS By MS/MS 2 2 22039000 7610200 14429000 5248 1994 5968;5969 13163;13164;13165;13166 12771;12772;12773 12772 3841;3842 3 SDTPLGSPLEPGQILEK HQQGVKRKSDTPLGSP EPGQILEKNEDSSKVK K S D E K N 0 0 0 1 0 1 2 2 0 1 3 1 0 0 3 2 1 0 0 0 0 0 17 0 1779.9254 H0YEX2 H0YEX2 184 200 TAF2 yes yes 2 0.014661 64.89 By matching By MS/MS 1 1 5919300 2172400 3747000 5249 1177 5970 13167;13168 12774 12774 2220 1 SDVIHAPLPSPVDK DGMEARLRSDVIHAPL PLPSPVDKVAANTPSM R S D D K V 1 0 0 2 0 0 0 0 1 1 1 1 0 0 3 2 0 0 0 2 0 0 14 0 1473.7827 Q14BN4 Q14BN4 139 152 SLMAP Sarcolemmal membrane-associated protein yes yes 2 0.0010858 102.15 By MS/MS By MS/MS 1 1 23656000 14202000 9454000 5250 2113 5971 13169;13170 12775;12776 12776 4179 2 SDVLELTDDNFESR ________________ TDDNFESRISDTGSAG - S D S R I 0 1 1 3 0 0 2 0 0 0 2 0 0 1 0 2 1 0 0 1 0 0 14 0 1638.7373 H7BZJ3 H7BZJ3 1 14 PDIA3 yes yes 2 0.0057554 103.43 By MS/MS By matching 1 1 30778000 14113000 16665000 5251 1267 5972 13171;13172 12777 12777 1 SEACPCQPDSGSPLPAEEEK KRSIEGRRSEACPCQP PLPAEEEKRLSAESGL R S E E K R 2 0 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 20 0 2186.9096 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5 A0A0G2JNZ2 493 512 SCRIB Protein scribble homolog yes no 2 4.6206E-07 132.65 By MS/MS By MS/MS 1 1 34843000 15512000 19331000 5252 361 5973 13173;13174 12778;12779 12779 664;665 2 SEACPCQPDSGSPLPAEEEKR KRSIEGRRSEACPCQP LPAEEEKRLSAESGLS R S E K R L 2 1 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 21 1 2343.0107 A0A0G2JNZ2;Q14160;A0A0G2JMS7;A0A0G2JPP5 A0A0G2JNZ2 493 513 SCRIB Protein scribble homolog yes no 3 0.015332 49.25 By MS/MS By MS/MS 1 1 13096000 7425500 5670400 5253 361 5974 13175;13176 12780;12781 12781 664;665 2 SEAPETPMEEEAELVLTEK SGSLRLGKSEAPETPM AELVLTEKSSGTFLSG K S E E K S 2 0 0 0 0 0 7 0 0 0 2 1 1 0 2 1 2 0 0 1 0 0 19 0 2130.9878 Q5JTH9;A0A087X1U8 Q5JTH9 72 90 RRP12 RRP12-like protein yes no 3 0.0032212 60.134 By MS/MS 1 7658000 0 7658000 5254 2223 5975 13177 12782 12782 888 7637 1 SECQDMSLSSPTSVLGGSR PDSPIQEKSECQDMSL TSVLGGSRHQSHTAEA K S E S R H 0 1 0 1 1 1 1 2 0 0 2 0 1 0 1 6 1 0 0 1 0 0 19 0 1996.883 O95613 O95613 2183 2201 PCNT Pericentrin yes yes 2 0.012854 53.001 By MS/MS 1 3742400 0 3742400 5255 1600 5976 13178 12783 12783 577 3035 1 SEDDSAKFDSNEEDSASVFSPSFGLK SFPSYSQKSEDDSAKF FSPSFGLKQTDKVPSK K S E L K Q 2 0 1 4 0 0 3 1 0 0 1 2 0 3 1 7 0 0 0 1 0 0 26 1 2794.2093 Q02880 Q02880 1457 1482 TOP2B DNA topoisomerase 2-beta yes yes 2;3 2.5629E-07 100.39 By MS/MS By MS/MS 3 3 225080000 118570000 106510000 5256 1989 5977;5978 13179;13180;13181;13182;13183;13184 12784;12785;12786;12787;12788;12789 12788 3815;3816;3820 6 SEDEDSLEEAGSPAPGPCPR PGSAGQPRSEDEDSLE PAPGPCPRSNAMLAVK R S E P R S 2 1 0 2 1 0 4 2 0 0 1 0 0 0 4 3 0 0 0 0 0 0 20 0 2098.8749 Q8TBB5 Q8TBB5 413 432 KLHDC4 Kelch domain-containing protein 4 yes yes 2 0.030022 54.951 By MS/MS 1 6181100 0 6181100 5257 2533 5979 13185 12790 12790 5171;5172 1 SEDMPFSPK EQNPPPARSEDMPFSP EDMPFSPKASVAAMEA R S E P K A 0 0 0 1 0 0 1 0 0 0 0 1 1 1 2 2 0 0 0 0 0 0 9 0 1036.4535 Q12888;A6NNK5;C9JXV0 Q12888 259 267 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0013494 109.39 By MS/MS By MS/MS 2 2 135850000 68874000 66974000 5258 2031 5980;5981 13186;13187;13188;13189 12791;12792;12793;12794;12795;12796 12794 808 3965 6 SEDPPGQEAGSEEEGSSASGLAK GPSSLESKSEDPPGQE SSASGLAKVKELAETI K S E A K V 3 0 0 1 0 1 5 4 0 0 1 1 0 0 2 5 0 0 0 0 0 0 23 0 2217.9509 I3L2B0;K7EIG1;O75153 I3L2B0 692 714 CLUH Clustered mitochondria protein homolog yes no 2 0.017918 55.208 By matching By MS/MS 1 1 20673000 10171000 10502000 5259 1310 5982 13190;13191 12797 12797 2435 1 SEDPPTTPIR ARQENEARSEDPPTTP DPPTTPIRGNLLHFPS R S E I R G 0 1 0 1 0 0 1 0 0 1 0 0 0 0 3 1 2 0 0 0 0 0 10 0 1111.551 Q12888;A6NNK5;C9JXV0;H7C151 Q12888 1050 1059 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.013601 82.171 By MS/MS By matching 1 1 126960000 72392000 54566000 5260 2031 5983 13192;13193 12798 12798 7537 1 SEDSIKGLQPEDVNLLVTCR NHIIPNGKSEDSIKGL VNLLVTCREEGNPVAS K S E C R E 0 1 1 2 1 1 2 1 0 1 3 1 0 0 1 2 1 0 0 2 0 0 20 1 2272.1369 P53794 P53794 591 610 SLC5A3 Sodium/myo-inositol cotransporter yes yes 3 0.005802 58.913 By MS/MS By matching 1 1 15381000 8078500 7302100 5261 1898 5984 13194;13195 12799 12799 3676;3677 1 SEEDNEIESEEEVQPK GTTYVTDKSEEDNEIE SEEEVQPKTQGSRRSS K S E P K T 0 0 1 1 0 1 7 0 0 1 0 1 0 0 1 2 0 0 0 1 0 0 16 0 1889.8014 P52701;A0A087WWJ1;C9J7Y7 P52701 219 234 MSH6 DNA mismatch repair protein Msh6 yes no 2 3.9738E-293 296.95 By MS/MS By MS/MS 1 1 133900000 68193000 65707000 5262 1888 5985 13196;13197 12800;12801;12802 12802 3660 3 SEEKISDSEGFK PPGGPGGRSEEKISDS ISDSEGFKANLSLLRR R S E F K A 0 0 0 1 0 0 3 1 0 1 0 2 0 1 0 3 0 0 0 0 0 0 12 1 1354.6252 P23246 P23246 268 279 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.0026731 92.269 By MS/MS By matching 1 1 8946800 5005600 3941200 5263 1753 5986 13198;13199 12803 12803 3309 1 SEESPVYSNSSVR PSDWWVVKSEESPVYS VYSNSSVRNELPMHHN K S E V R N 0 1 1 0 0 0 2 0 0 0 0 0 0 0 1 5 0 0 1 2 0 0 13 0 1439.6529 H0Y8J2;Q03188 H0Y8J2 442 454 CENPC Centromere protein C yes no 2 0.0099922 73.834 By MS/MS By MS/MS 1 1 10928000 6404800 4523100 5264 1148 5987 13200;13201 12804;12805 12805 2182 2 SEEVPAFGVASPPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK LVRINEIKSEEVPAFG LPPHLALKAENNSEVG K S E L K A 5 0 1 3 0 0 3 4 1 0 5 1 1 1 9 2 6 0 0 2 0 0 44 0 4408.1784 Q08211 Q08211 77 120 DHX9 ATP-dependent RNA helicase A yes yes 3;4 1.6343E-28 101.02 By MS/MS By MS/MS 3 4 591760000 314820000 276940000 5265 2012 5988;5989 13202;13203;13204;13205;13206;13207;13208 12806;12807;12808;12809;12810;12811;12812;12813 12810 795 3880;7529;7530;7531 8 SEFASGNTYALYVRDTLQPGMR RSRRFRPRSEFASGNT DTLQPGMRVRMLDDYE R S E M R V 2 2 1 1 0 1 1 2 0 0 2 0 1 1 1 2 2 0 2 1 0 0 22 1 2475.1853 Q14999 Q14999 361 382 CUL7 Cullin-7 yes yes 3 0.021287 49.528 By MS/MS 1 2876600 2876600 0 5266 2112 5990 13209 12814 12814 841 4178 0 SEGSPVLPHEPAK TRVRANSKSEGSPVLP VLPHEPAKVKPEESRD K S E A K V 1 0 0 0 0 0 2 1 1 0 1 1 0 0 3 2 0 0 0 1 0 0 13 0 1346.683 Q9UKE5 Q9UKE5 766 778 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.026731 61.167 By MS/MS By matching 1 1 12413000 7646500 4766700 5267 3023 5991 13210;13211 12815 12815 6372 1 SEILDESDMYTDNR DVIEEIIKSEILDESD SDMYTDNRSRKRVSEK K S E N R S 0 1 1 3 0 0 2 0 0 1 1 0 1 0 0 2 1 0 1 0 0 0 14 0 1686.7043 Q6P4Q7 Q6P4Q7 506 519 CNNM4 Metal transporter CNNM4 yes yes 2 0.011371 64.224 By MS/MS By MS/MS 1 1 12083000 6976500 5106700 5268 2321 5992 13212;13213 12816;12817 12817 930 7664 1 SEISPEGEKYKPLITGEK LLENTTIRSEISPEGE KPLITGEKKVQCISHE R S E E K K 0 0 0 0 0 0 4 2 0 2 1 3 0 0 2 2 1 0 1 0 0 0 18 2 2004.0415 Q96PY6 Q96PY6 834 851 NEK1 Serine/threonine-protein kinase Nek1 yes yes 3 0.0022374 81.574 By MS/MS By matching 1 1 15709000 7830500 7878500 5269 2699 5993 13214;13215 12818 12818 5569 1 SEIYGLVQR KSSSEESRSEIYGLVQ EIYGLVQRCVIIQKDD R S E Q R C 0 1 0 0 0 1 1 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1063.5662 Q9NZN5 Q9NZN5 63 71 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 2 0.010972 75.109 By matching By MS/MS 1 1 8555800 4017100 4538600 5270 2962 5994 13216;13217 12819 12819 8482 0 SEKPLENGTGFQAQDISGQK EPGNQEKKSEKPLENG AQDISGQKNGRGVIFG K S E Q K N 1 0 1 1 0 3 2 3 0 1 1 2 0 1 1 2 1 0 0 0 0 0 20 1 2133.0338 P49792 P49792 1912 1931 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.029315 47.227 By MS/MS By matching 1 1 16740000 5363200 11376000 5271 1860 5995 13218;13219 12820 12820 0 SELDTEKVPLSPLPGPK AKRKQLLRSELDTEKV LSPLPGPKQTPPLKGC R S E P K Q 0 0 0 1 0 0 2 1 0 0 3 2 0 0 4 2 1 0 0 1 0 0 17 1 1805.9775 Q8NHU6 Q8NHU6 309 325 TDRD7 Tudor domain-containing protein 7 yes yes 3 0.0035339 67.928 By MS/MS 1 4673300 4673300 0 5272 2526 5996 13220 12821;12822 12821 5161 2 SELGNQSPSTSSR MQNDSILKSELGNQSP QSPSTSSRQVTGQPQN K S E S R Q 0 1 1 0 0 1 1 1 0 0 1 0 0 0 1 5 1 0 0 0 0 0 13 0 1348.6219 A0A0A0MSK5;J3KN66;Q5JTV8;H0YD16 A0A0A0MSK5 188 200 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 2 0.02763 62.166 By MS/MS 1 12959000 0 12959000 5273 251 5997 13221 12823 12823 439 0 SELLMIIQMETQSSMRKK SDVQTAIKSELLMIIQ TQSSMRKKVCDIAAEL K S E K K V 0 1 0 0 0 2 2 0 0 2 2 2 3 0 0 3 1 0 0 0 0 0 18 2 2152.1054 C9JZ53;E7EQT5;E7EV12;C9JMV5;E7ETV3;H0Y3V4;H0Y8C6;O00410 C9JZ53 31 48 IPO5 Importin-5 yes no 3 0.028168 40.81 By MS/MS 1 5073800 0 5073800 5274 677 5998 13222 12824 12824 263 1253;1254 0 SELNMESNSDAQDLVNSQK DKMKLGNKSELNMESN QDLVNSQKAMCNETTS K S E Q K A 1 0 3 2 0 2 2 0 0 0 2 1 1 0 0 4 0 0 0 1 0 0 19 0 2107.9328 F8VY01;Q6ZV73 F8VY01 384 402 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 yes no 2 0.023594 56.551 By MS/MS 1 0 0 0 5275 1027 5999 13223 12825 12825 372 1922;1923 1 SELSQDAEPAGSQETK ERRSLRKRSELSQDAE PAGSQETKDSGSQEVL R S E T K D 2 0 0 1 0 2 3 1 0 0 1 1 0 0 1 3 1 0 0 0 0 0 16 0 1675.7537 Q9BVJ6;X6RJY0 Q9BVJ6 434 449 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 0.0065132 74.772 By MS/MS By matching 1 1 29218000 16569000 12649000 5276 2757 6000 13224;13225 12826 12826 5737;7828 1 SEMKMEIDDLASNMETVSK KQKLEKEKSEMKMEID SNMETVSKAKGNLEKM K S E S K A 1 0 1 2 0 0 3 0 0 1 1 2 3 0 0 3 1 0 0 1 0 0 19 1 2156.964 P12882 P12882 1226 1244 MYH1 Myosin-1 yes yes 2 0.032112 43.604 By MS/MS 1 0 0 0 5277 1689 6001 13226 12827 12827 627 1 SEPAVVSLEYGVAR EYAEEFSKSEPAVVSL SLEYGVARMTC_____ K S E A R M 2 1 0 0 0 0 2 1 0 0 1 0 0 0 1 2 0 0 1 3 0 0 14 0 1475.762 Q9Y217 Q9Y217 605 618 MTMR6 Myotubularin-related protein 6 yes yes 2 0.012349 69.346 By MS/MS 1 3810100 3810100 0 5278 3081 6002 13227 12828 12828 8507 0 SEPHSPGIPEIFR SSSSKGIKSEPHSPGI PGIPEIFRTASQRCRD K S E F R T 0 1 0 0 0 0 2 1 1 2 0 0 0 1 3 2 0 0 0 0 0 0 13 0 1464.7361 Q9UJJ2;Q8ND82 Q9UJJ2 76 88 ZNF280C Zinc finger protein 280C yes no 2;3 0.0002577 111.07 By MS/MS By MS/MS 2 2 76211000 38242000 37969000 5279 2508 6003 13228;13229;13230;13231 12829;12830;12831;12832;12833;12834;12835;12836 12830 5121 8 SEPSLEPESFRSPTFGK SSRHPSYRSEPSLEPE FRSPTFGKSFHFDPLS R S E G K S 0 1 0 0 0 0 3 1 0 0 1 1 0 2 3 4 1 0 0 0 0 0 17 1 1893.9109 Q9C0B5;H0YEF4 Q9C0B5 398 414 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase yes no 2 0.00075783 105.25 By MS/MS By matching 1 1 18182000 11096000 7086400 5280 2790 6004 13232;13233 12837 12837 5803 1 SEPVKEESSELEQPFAQDTSSVGPDR DILGETCKSEPVKEES TSSVGPDRKLAEEEDL K S E D R K 1 1 0 2 0 2 5 1 0 0 1 1 0 1 3 5 1 0 0 2 0 0 26 1 2847.3046 Q15424;Q14151 Q15424 227 252 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 yes no 3 0.0056643 55.484 By MS/MS 1 16603000 16603000 0 5281 2139 6005 13234 12838 12838 4242;4243;7600 1 SEPVKEESSELEQPFAQDTSSVGPDRK DILGETCKSEPVKEES SSVGPDRKLAEEEDLF K S E R K L 1 1 0 2 0 2 5 1 0 0 1 2 0 1 3 5 1 0 0 2 0 0 27 2 2975.3996 Q15424;Q14151 Q15424 227 253 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 yes no 3 4.2434E-07 96.723 By matching By MS/MS 1 1 43437000 22897000 20540000 5282 2139 6006 13235;13236 12839;12840 12840 4242;4243;7600 2 SEQSSMSIEFGQESPEQSLAMDFSR RTPVQDHRSEQSSMSI SLAMDFSRQSPDHPTV R S E S R Q 1 1 0 1 0 3 4 1 0 1 1 0 2 2 1 7 0 0 0 0 0 0 25 0 2806.2062 P46821 P46821 1640 1664 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.012722 48.489 By MS/MS 1 12845000 0 12845000 5283 1840 6007 13237 12841 12841 708;709 3502 1 SESAPTLHPYSPLSPK GADTPFGRSESAPTLH PYSPLSPKGRPSSPRT R S E P K G 1 0 0 0 0 0 1 0 1 0 2 1 0 0 4 4 1 0 1 0 0 0 16 0 1709.8625 Q8WUF5;K7EN03 Q8WUF5 100 115 PPP1R13L RelA-associated inhibitor yes no 3 0.0029304 68.972 By MS/MS 1 2328400 0 2328400 5284 2554 6008 13238 12842 12842 5216 1 SESENWR GRKHEFIRSESENWRI RSESENWRIFREEQNG R S E W R I 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 7 0 906.38316 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1;C9JH78;C9IYH5 I1E4Y6 221 227 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 8.1657E-08 163.15 By MS/MS By MS/MS 1 1 32001000 17800000 14201000 5285 1298 6009 13239;13240 12843;12844;12845;12846 12844 2410 4 SESHTDLTFSR QIIRNYARSESHTDLT HTDLTFSRELTNDERK R S E S R E 0 1 0 1 0 0 1 0 1 0 1 0 0 1 0 3 2 0 0 0 0 0 11 0 1278.584 O15226 O15226 616 626 NKRF NF-kappa-B-repressing factor yes yes 2 0.0026866 87.216 By MS/MS By matching 1 1 24614000 11697000 12917000 5286 1476 6010 13241;13242 12847 12847 2761 1 SESLDPDSSMDTTLILK SASRIRERSESLDPDS MDTTLILKDTEAVMAF R S E L K D 0 0 0 3 0 0 1 0 0 1 3 1 1 0 1 4 2 0 0 0 0 0 17 0 1850.8819 H0Y2V6;Q5SW79 H0Y2V6 843 859 CEP170 Centrosomal protein of 170 kDa yes no 2 1.4293E-52 183.75 By MS/MS By MS/MS 1 2 157330000 71907000 85427000 5287 1112 6011;6012 13243;13244;13245 12848;12849;12850;12851 12850 401 2091 4 SESLESPR TLPRGLFRSESLESPR SESLESPRGERLLQDA R S E P R G 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 3 0 0 0 0 0 0 8 0 903.42977 V9GYM8;Q92974;Q5VY93 V9GYM8 688 695 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.01129 87.149 By MS/MS 1 12297000 0 12297000 5288 2613 6013 13246 12852 12852 5375 1 SESLIDASEDSQLEAAIR SPPKKCARSESLIDAS SQLEAAIRASLQETHF R S E I R A 3 1 0 2 0 1 3 0 0 2 2 0 0 0 0 4 0 0 0 0 0 0 18 0 1932.9276 C9JAT7;O94888 C9JAT7 116 133 UBXN7 UBX domain-containing protein 7 yes no 2 4.0599E-06 125.82 By MS/MS By MS/MS 2 1 25923000 15942000 9980800 5289 653 6014 13247;13248;13249 12853;12854;12855 12855 1214;1215 3 SESLMGTLKRR KGGKNRSKSESLMGTL LMGTLKRRLSAKQKSK K S E R R L 0 2 0 0 0 0 1 1 0 0 2 1 1 0 0 2 1 0 0 0 0 0 11 2 1276.6922 J3KTM7;O14544 J3KTM7 70 80 SOCS6 Suppressor of cytokine signaling 6 yes no 2 0.021965 55.04 By MS/MS 1 0 0 0 5290 1345 6015 13250 12856 12856 472 2485;2486 1 SESLSNCSIGK EDATMGSRSESLSNCS LSNCSIGKKRLEKSPS R S E G K K 0 0 1 0 1 0 1 1 0 1 1 1 0 0 0 4 0 0 0 0 0 0 11 0 1180.5394 Q92625 Q92625 645 655 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2 0.027788 60.301 By MS/MS By matching 1 1 10119000 7038000 3080700 5291 2592 6016 13251;13252 12857 12857 5325 1 SESLSSRSTMVTSSGAPQTTPHR WMETPRQRSESLSSRS APQTTPHRTFGGGKAA R S E H R T 1 2 0 0 0 1 1 1 1 0 1 0 1 0 2 7 4 0 0 1 0 0 23 1 2403.1448 Q9BZJ8 Q9BZJ8 256 278 GPR61 Probable G-protein coupled receptor 61 yes yes 3 0.027751 48.656 By MS/MS 1 0 0 0 5292 2784 6017 13253 12858 12858 5788;5789;5790;5791 1 SESPDHMVSQYQQALEEIER LLESINGKSESPDHMV QALEEIERLKKQCSAL K S E E R L 1 1 0 1 0 3 4 0 1 1 1 0 1 0 1 3 0 0 1 1 0 0 20 0 2375.07 H0YHQ4;H0YIR5;Q14149 H0YHQ4 15 34 MORC3 MORC family CW-type zinc finger protein 3 yes no 3 0.0024531 63.488 By matching By MS/MS 1 1 6616100 3838200 2777900 5293 1187 6018 13254;13255 12859 12859 433 2228 1 SESPDLILHDSGVSAAR ASNLETPRSESPDLIL DSGVSAARAAAAAAAA R S E A R A 2 1 0 2 0 0 1 1 1 1 2 0 0 0 1 4 0 0 0 1 0 0 17 0 1752.8642 P0CG40 P0CG40 438 454 SP9 Transcription factor Sp9 yes yes 3 0.0005903 81.316 By MS/MS By MS/MS 1 1 31476000 17555000 13921000 5294 1669 6019 13256;13257 12860;12861 12860 3152 2 SESPKEPEQLR ________________ PKEPEQLRKLFIGGLS K S E L R K 0 1 0 0 0 1 3 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 11 1 1298.6466 F8W6I7;P09651;F8VTQ5;F8W646 F8W6I7 4 14 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 3 0.00070076 95.195 By MS/MS By MS/MS 1 1 343040000 180420000 162620000 5295 1033 6020 13258;13259 12862;12863 12863 1931 2 SESPKEPEQLRK ________________ KEPEQLRKLFIGGLSF K S E R K L 0 1 0 0 0 1 3 0 0 0 1 2 0 0 2 2 0 0 0 0 0 0 12 2 1426.7416 F8W6I7;P09651;F8VTQ5;F8W646 F8W6I7 4 15 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 3 0.0037184 84.365 By MS/MS By matching 1 1 314750000 184610000 130140000 5296 1033 6021 13260;13261 12864 12864 1931 1 SESPPAELPSLR LRKSTKKRSESPPAEL PAELPSLRRSTRQKTT R S E L R R 1 1 0 0 0 0 2 0 0 0 2 0 0 0 3 3 0 0 0 0 0 0 12 0 1281.6565 Q14669;H7C1L9;G5E9G6 Q14669 310 321 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.0015259 91.307 By MS/MS By MS/MS 1 1 88005000 48827000 39178000 5297 2095 6022 13262;13263 12865;12866 12866 4130 2 SESPPPLSDPK TSAITASRSESPPPLS PPPLSDPKQAKVVARR R S E P K Q 0 0 0 1 0 0 1 0 0 0 1 1 0 0 4 3 0 0 0 0 0 0 11 0 1152.5663 Q15059 Q15059 261 271 BRD3 Bromodomain-containing protein 3 yes yes 2 0.00014124 116.84 By MS/MS By MS/MS 1 1 104380000 62801000 41583000 5298 2126 6023 13264;13265 12867;12868;12869 12869 4204 3 SESPSLTQER AGIMAADRSESPSLTQ SPSLTQERANLSDEQC R S E E R A 0 1 0 0 0 1 2 0 0 0 1 0 0 0 1 3 1 0 0 0 0 0 10 0 1132.536 Q9BXW9;H7BZJ7 Q9BXW9 590 599 FANCD2 Fanconi anemia group D2 protein yes no 2 0.00013362 118.9 By MS/MS By MS/MS 1 1 49597000 27743000 21853000 5299 2775 6024 13266;13267 12870;12871 12870 5775 2 SESSGILPNTTDMR QTHPPCRRSESSGILP LPNTTDMRLRPGTRRD R S E M R L 0 1 1 1 0 0 1 1 0 1 1 0 1 0 1 3 2 0 0 0 0 0 14 0 1506.6984 Q92667;I3L2A2;I3L2N7;I3L0K6 Q92667 105 118 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 6.5241E-54 192.54 By MS/MS By MS/MS 2 2 66187000 34593000 31594000 5300 2594 6025;6026 13268;13269;13270;13271 12872;12873;12874;12875 12874 1037 5329 4 SESVEGFLSPSR HSGKRTPRSESVEGFL EGFLSPSRCGSRNGEK R S E S R C 0 1 0 0 0 0 2 1 0 0 1 0 0 1 1 4 0 0 0 1 0 0 12 0 1293.6201 Q08AD1 Q08AD1 1311 1322 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 2.4987E-10 143.98 By MS/MS By MS/MS 2 2 24346000 14818000 9528000 5301 2017 6027 13272;13273;13274;13275 12876;12877;12878;12879 12876 3893;3894 4 SESVVSGLDSPAK KALGILGRSESVVSGL SGLDSPAKTSSMEKKL R S E A K T 1 0 0 1 0 0 1 1 0 0 1 1 0 0 1 4 0 0 0 2 0 0 13 0 1274.6354 H7BYJ3;O14578 H7BYJ3 59 71 CIT Citron Rho-interacting kinase yes no 2 0.00089219 112.13 By MS/MS By MS/MS 1 1 44498000 24251000 20247000 5302 1262 6028 13276;13277 12880;12881;12882 12882 2343;2344 3 SESVVYADIR HHSDKINKSESVVYAD SVVYADIRKN______ K S E I R K 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 2 0 0 1 2 0 0 10 0 1137.5666 O95297 O95297 258 267 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.0057904 99.815 By MS/MS By MS/MS 1 1 44128000 21643000 22485000 5303 1590 6029 13278;13279 12883;12884 12883 8211 2 SETAPAAPAAPAPAEKTPVK ________________ PAEKTPVKKKARKSAG M S E V K K 7 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 2 0 0 1 0 0 20 1 1903.0051 P10412 P10412 2 21 HIST1H1E Histone H1.4 yes yes 2;3 2.7207E-09 139.78 By MS/MS By MS/MS 2 2 226450000 139020000 87435000 5304 1674 6030 13280;13281;13282;13283 12885;12886 12886 7385 2 SETAPAAPAAPAPAEKTPVKK ________________ AEKTPVKKKARKSAGA M S E K K K 7 0 0 0 0 0 2 0 0 0 0 3 0 0 5 1 2 0 0 1 0 0 21 2 2031.1001 P10412 P10412 2 22 HIST1H1E Histone H1.4 yes yes 3 0.00017195 94.281 By MS/MS By MS/MS 1 1 20591000 13697000 6893900 5305 1674 6031 13284;13285 12887;12888 12887 7385 2 SETIQDTDTQSLVGSPSTR YLEENPEKSETIQDTD LVGSPSTRIAPHIIGA K S E T R I 0 1 0 2 0 2 1 1 0 1 1 0 0 0 1 4 4 0 0 1 0 0 19 0 2020.9549 Q9NZN5;E9PMR6 Q9NZN5 327 345 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2 1.5225E-06 130.36 By MS/MS By matching 1 1 15275000 8723900 6551500 5306 2962 6032 13286;13287 12889;12890 12890 6237;6238;7889 2 SETSWESPK SVPPSQTKSETSWESP ETSWESPKQIKKKKKA K S E P K Q 0 0 0 0 0 0 2 0 0 0 0 1 0 0 1 3 1 1 0 0 0 0 9 0 1049.4666 Q86UE4;E5RJU9 Q86UE4 562 570 MTDH Protein LYRIC yes no 2 0.031716 59.265 By MS/MS By matching 1 1 14083000 6619900 7463000 5307 2401 6033 13288;13289 12891 12891 1 SEVQQPVHPKPLSPDSR DSRDSQVKSEVQQPVH KPLSPDSRASSLSESS K S E S R A 0 1 0 1 0 2 1 0 1 0 1 1 0 0 4 3 0 0 0 2 0 0 17 1 1899.9803 Q9UHB6;F8VS07;F8VQE1;F8VRN8 Q9UHB6 350 366 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0018053 74.308 By MS/MS By MS/MS 2 2 123880000 67088000 56794000 5308 3003 6034;6035 13290;13291;13292;13293 12892;12893;12894;12895 12892 6322;6323 4 SEWLDPSQKSPLHVGETR QDNSSNGKSEWLDPSQ PLHVGETRKEDDPNED K S E T R K 0 1 0 1 0 1 2 1 1 0 2 1 0 0 2 3 1 1 0 1 0 0 18 1 2065.0229 O15164 O15164 802 819 TRIM24 Transcription intermediary factor 1-alpha yes yes 3 0.00058777 85.224 By MS/MS By MS/MS 1 1 91429000 56978000 34451000 5309 1474 6036 13294;13295 12896;12897 12896 2752 2 SFAGNLNTYK DAVRLRGRSFAGNLNT AGNLNTYKRLAIKLPD R S F Y K R 1 0 2 0 0 0 0 1 0 0 1 1 0 1 0 1 1 0 1 0 0 0 10 0 1113.5455 B1APP6;Q01813 B1APP6 170 179 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes no 2 0.0031198 99.539 By MS/MS By MS/MS 1 1 14495000 7626800 6868300 5310 532 6037 13296;13297 12898;12899;12900 12898 1002 3 SFDEVEGVFGR GECGFYQRSFDEVEGV EVEGVFGRGGGREMHR R S F G R G 0 1 0 1 0 0 2 2 0 0 0 0 0 2 0 1 0 0 0 2 0 0 11 0 1240.5724 I1E4Y6;Q6Y7W6;E7ESB6;C9JW88 I1E4Y6 139 149 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 1.0511E-38 191.33 By MS/MS By MS/MS 1 1 30702000 15902000 14800000 5311 1298 6038 13298;13299 12901;12902 12901 2411 2 SFDHLISDTK KKLLGTRKSFDHLISD DHLISDTKAPKRQEME K S F T K A 0 0 0 2 0 0 0 0 1 1 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1161.5666 H0Y465;P21359;J3QSG6 H0Y465 2188 2197 NF1 Neurofibromin;Neurofibromin truncated yes no 2 0.001483 109.39 By MS/MS By MS/MS 1 1 76901000 41032000 35869000 5312 1118 6039 13300;13301 12903;12904 12904 2123 2 SFDWGYEER GAGDGPPRSFDWGYEE FDWGYEERSGAHSSAS R S F E R S 0 1 0 1 0 0 2 1 0 0 0 0 0 1 0 1 0 1 1 0 0 0 9 0 1187.4884 P18615;A0A0A0MT02;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 165 173 NELFE Negative elongation factor E yes no 2 0.0023106 142 By MS/MS By MS/MS 1 1 7923000 4720700 3202300 5313 1726 6040 13302;13303 12905;12906 12905 3248 2 SFDYNYR ERRRSRSRSFDYNYRR RSFDYNYRRSYSPRNR R S F Y R R 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 0 7 0 963.40865 Q5JRI1;O75494 Q5JRI1 133 139 SRSF10 Serine/arginine-rich splicing factor 10 yes no 2 0.023301 101.54 By MS/MS By MS/MS 1 1 190640000 95941000 94694000 5314 1548 6041 13304;13305 12907;12908 12907 2924 2 SFEEEGEHLGSR RLEAVTARSFEEEGEH EGEHLGSRKHRMSEEK R S F S R K 0 1 0 0 0 0 4 2 1 0 1 0 0 1 0 2 0 0 0 0 0 0 12 0 1375.6004 Q9BXW6 Q9BXW6 499 510 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 2 8.1856E-11 145.81 By MS/MS By MS/MS 1 1 36657000 16709000 19947000 5315 2774 6042 13306;13307 12909;12910 12910 5773 2 SFELPPYTPPPILSPVR LADHPSERSFELPPYT PPILSPVREGSGLYFN R S F V R E 0 1 0 0 0 0 1 0 0 1 2 0 0 1 6 2 1 0 1 1 0 0 17 0 1909.0349 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 648 664 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 2 0.0093244 81.807 By matching By MS/MS 1 1 13562000 8493400 5068900 5316 259 6043 13308;13309 12911 12911 451;6907 1 SFEMTEFNQALEEIK SEESADARSFEMTEFN NQALEEIKGQVVENNS R S F I K G 1 0 1 0 0 1 4 0 0 1 1 1 1 2 0 1 1 0 0 0 0 0 15 0 1814.8397 Q9BVS4;H0Y919 Q9BVS4 390 404 RIOK2 Serine/threonine-protein kinase RIO2 yes no 2 3.2081E-279 297.72 By MS/MS 1 18061000 0 18061000 5317 2758 6044 13310 12912 12912 1097 5740 1 SFEVEEVETPNSTPPR RPFTALKRSFEVEEVE TPNSTPPRRVQTPLLR R S F P R R 0 1 1 0 0 0 4 0 0 0 0 0 0 1 3 2 2 0 0 2 0 0 16 0 1816.8479 K7EJV0;K7EPY1;K7ENL0;Q9UHD8 K7EJV0 15 30 SEPT9 Septin-9 yes no 2;3 1.5687E-184 256.35 By MS/MS By MS/MS 3 2 151900000 78523000 73377000 5318 1374 6045 13311;13312;13313;13314;13315 12913;12914;12915;12916;12917;12918;12919;12920 12915 2542;7262 8 SFEVEEVETPNSTPPRR RPFTALKRSFEVEEVE PNSTPPRRVQTPLLRA R S F R R V 0 2 1 0 0 0 4 0 0 0 0 0 0 1 3 2 2 0 0 2 0 0 17 1 1972.949 K7EJV0;K7EPY1;K7ENL0;Q9UHD8 K7EJV0 15 31 SEPT9 Septin-9 yes no 3 0.0058554 60.949 By matching By MS/MS 1 1 12850000 5505600 7344300 5319 1374 6046 13316;13317 12921 12921 2542;7262 1 SFGNPFEGSR VKTMIRKRSFGNPFEG GNPFEGSRREERSLSA R S F S R R 0 1 1 0 0 0 1 2 0 0 0 0 0 2 1 2 0 0 0 0 0 0 10 0 1096.4938 F5GZ00;Q96RR4 F5GZ00 282 291 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 yes no 2 0.027179 60.08 By MS/MS By matching 1 1 7998400 4381500 3617000 5320 950 6047 13318;13319 12922 12922 1785 1 SFGTRPLSSGFSPEEAQQQDEEFEK RTLDAQDRSFGTRPLS QQDEEFEKKIPSVEDS R S F E K K 1 1 0 1 0 3 5 2 0 0 1 1 0 3 2 4 1 0 0 0 0 0 25 1 2829.2729 Q9C0C2 Q9C0C2 976 1000 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 1.0145E-05 83.939 By MS/MS 1 12451000 0 12451000 5321 2791 6048 13320 12923 12923 5824 1 SFHFDPLSSGSR FRSPTFGKSFHFDPLS DPLSSGSRSSSLKSAQ K S F S R S 0 1 0 1 0 0 0 1 1 0 1 0 0 2 1 4 0 0 0 0 0 0 12 0 1335.6208 Q9C0B5;H0YEF4 Q9C0B5 415 426 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase yes no 2 0.0023748 87.083 By MS/MS By MS/MS 1 1 15490000 6477800 9012000 5322 2790 6049 13321;13322 12924;12925 12925 5804 2 SFIKDYPVVSIEDPFDQDDWGAWQK DQLADLYKSFIKDYPV DDWGAWQKFTASAGIQ K S F Q K F 1 0 0 5 0 2 1 1 0 2 0 2 0 2 2 2 0 2 1 2 0 0 25 1 2984.3869 P06733 P06733 282 306 ENO1 Alpha-enolase yes yes 3 2.1919E-07 119.28 By MS/MS By matching 1 1 17544000 11592000 5952000 5323 1646 6050 13323;13324 12926 12926 1 SFKLSGFSFK KKRFSFKKSFKLSGFS KLSGFSFKKNKKEAGE K S F F K K 0 0 0 0 0 0 0 1 0 0 1 2 0 3 0 3 0 0 0 0 0 0 10 1 1146.6073 P29966 P29966 163 172 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.0043762 104.94 By MS/MS By MS/MS 1 1 28365000 16901000 11464000 5324 1776 6051 13325;13326 12927;12928 12927 3356;3361;3362 2 SFKLSGFSFKK KKRFSFKKSFKLSGFS LSGFSFKKNKKEAGEG K S F K K N 0 0 0 0 0 0 0 1 0 0 1 3 0 3 0 3 0 0 0 0 0 0 11 2 1274.7023 P29966 P29966 163 173 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.014321 93.228 By MS/MS By MS/MS 2 2 46051000 23369000 22681000 5325 1776 6052 13327;13328;13329;13330 12929;12930;12931 12929 3356;3361;3362 3 SFLESNYFTKPNLK GSSRERRRSFLESNYF YFTKPNLKHTDTANKE R S F L K H 0 0 2 0 0 0 1 0 0 0 2 2 0 2 1 2 1 0 1 0 0 0 14 1 1686.8617 O60293 O60293 1046 1059 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 0.0025052 104.43 By MS/MS 1 5287400 0 5287400 5326 1515 6053 13331 12932 12932 2861 1 SFLSEPSSPGR DLHSELERSFLSEPSS SEPSSPGRTKTTKGFK R S F G R T 0 1 0 0 0 0 1 1 0 0 1 0 0 1 2 4 0 0 0 0 0 0 11 0 1162.5619 Q69YN4;H0YC41 Q69YN4 1572 1582 KIAA1429 Protein virilizer homolog yes no 2 0.0021137 95.273 By MS/MS By MS/MS 1 1 229670000 121070000 108600000 5327 2298 6054 13332;13333 12933;12934 12933 4625;4626 2 SFLSEPSSPGRTK DLHSELERSFLSEPSS PSSPGRTKTTKGFKLG R S F T K T 0 1 0 0 0 0 1 1 0 0 1 1 0 1 2 4 1 0 0 0 0 0 13 1 1391.7045 Q69YN4;H0YC41 Q69YN4 1572 1584 KIAA1429 Protein virilizer homolog yes no 2 1.3596E-08 139.38 By matching By MS/MS 1 1 19900000 7175100 12725000 5328 2298 6055 13334;13335 12935;12936 12936 4625;4626;7658 2 SFLSVLNSLMVKCPAK TDLESPVKSFLSVLNS LMVKCPAKECNEEVSL K S F A K E 1 0 1 0 1 0 0 0 0 0 3 2 1 1 1 3 0 0 0 2 0 0 16 1 1792.9579 P15918 P15918 346 361 RAG1 V(D)J recombination-activating protein 1;Endonuclease RAG1;E3 ubiquitin-protein ligase RAG1 yes yes 3 0.029315 45.014 By matching By MS/MS 1 1 13812000 5992000 7819500 5329 1707 6056 13336;13337 12937 12937 638 0 SFLVASVLPGPDGNINSPTR DCPELVQRSFLVASVL GNINSPTRNADMQEEL R S F T R N 1 1 2 1 0 0 0 2 0 1 2 0 0 1 3 3 1 0 0 2 0 0 20 0 2040.064 Q7Z3K3 Q7Z3K3 1322 1341 POGZ Pogo transposable element with ZNF domain yes yes 2 1.5665E-110 207.43 By MS/MS 1 0 0 0 5330 2377 6057 13338 12938 12938 4827 1 SFLVIVDGSPK HDKNTPWKSFLVIVDG VIVDGSPKNDDGHKTE K S F P K N 0 0 0 1 0 0 0 1 0 1 1 1 0 1 1 2 0 0 0 2 0 0 11 0 1160.6441 Q9H116 Q9H116 605 615 GZF1 GDNF-inducible zinc finger protein 1 yes yes 2 0.0010589 106.32 By matching By MS/MS 1 1 10832000 5993000 4838800 5331 2810 6058 13339;13340 12939;12940 12939 5875 2 SFNQNSHLIIHQR YKCNECGKSFNQNSHL SHLIIHQRIHTGEKPY K S F Q R I 0 1 2 0 0 2 0 0 2 2 1 0 0 1 0 2 0 0 0 0 0 0 13 0 1592.8172 Q9P0L1 Q9P0L1 643 655 ZKSCAN7 Zinc finger protein with KRAB and SCAN domains 7 yes yes 2;3 0.028275 54.276 By MS/MS By MS/MS 2 2 348370000 157490000 190880000 5332 2966 6059 13341;13342;13343;13344 12941;12942 12942 6245 2 SFNSDSPSIIGVPSETQTSPVER RVCFQDNRSFNSDSPS TQTSPVERYPGRPVKA R S F E R Y 0 1 1 1 0 1 2 1 0 2 0 0 0 1 3 6 2 0 0 2 0 0 23 0 2433.166 Q8N8K9 Q8N8K9 79 101 KIAA1958 Uncharacterized protein KIAA1958 yes yes 2 0.0053581 64.318 By MS/MS 1 8248900 8248900 0 5333 2486 6060 13345 12943 12943 5075 1 SFNYSPNSSTSEVSSTSASK SAQPFIPKSFNYSPNS VSSTSASKASIGQSPG K S F S K A 1 0 2 0 0 0 1 0 0 0 0 1 0 1 1 9 2 0 1 1 0 0 20 0 2065.9076 Q5VT52 Q5VT52 589 608 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2;3 0.0001382 119.18 By MS/MS By MS/MS 2 2 123060000 70324000 52735000 5334 2264 6061 13346;13347;13348;13349 12944;12945;12946 12945 4543 3 SFPIKPVPSPSWSGSCR CHVSAYEKSFPIKPVP PSWSGSCRRSLLSPKK K S F C R R 0 1 0 0 1 0 0 1 0 1 0 1 0 1 4 5 0 1 0 1 0 0 17 1 1887.9302 Q9P0U3 Q9P0U3 149 165 SENP1 Sentrin-specific protease 1 yes yes 2;3 0.00054648 100.04 By MS/MS By MS/MS 2 2 52165000 34099000 18066000 5335 2967 6062 13350;13351;13352;13353 12947;12948;12949 12948 6248;6249 3 SFQDYTGQK EQEERRRRSFQDYTGQ FQDYTGQKITLEAVLN R S F Q K I 0 0 0 1 0 2 0 1 0 0 0 1 0 1 0 1 1 0 1 0 0 0 9 0 1072.4825 A0A087WXU5;A0A087WYV3;A0A0D9SEW3;A0A087WXF8;Q9NP64 A0A087WXU5 114 122 ZCCHC17 Nucleolar protein of 40 kDa yes no 2 0.024422 62.799 By matching By MS/MS 1 1 5853600 3290100 2563400 5336 105 6063 13354;13355 12950 12950 187 1 SFSADNFIGIQR LCRAAMRRSFSADNFI DNFIGIQRSKAILS__ R S F Q R S 1 1 1 1 0 1 0 1 0 2 0 0 0 2 0 2 0 0 0 0 0 0 12 0 1353.6677 Q8N7R7 Q8N7R7 342 353 CCNYL1 Cyclin-Y-like protein 1 yes yes 2 8.4607E-15 161.87 By MS/MS By MS/MS 1 1 68770000 42790000 25980000 5337 2484 6064 13356;13357 12951;12952;12953 12951 5073 3 SFSAMEDDQRTRPEVSK SMKTEENKSFSAMEDD RTRPEVSKDTVMKQTH K S F S K D 1 2 0 2 0 1 2 0 0 0 0 1 1 1 1 3 1 0 0 1 0 0 17 2 1981.9164 Q6SJ93 Q6SJ93 11 27 FAM111B Protein FAM111B yes yes 2 0.028078 53.557 By MS/MS 1 0 0 0 5338 2335 6065 13358 12954 12954 937 4715;4716;4717 1 SFSASQSTDR VLQPHRLRSFSASQST SASQSTDREGASPVTE R S F D R E 1 1 0 1 0 1 0 0 0 0 0 0 0 1 0 4 1 0 0 0 0 0 10 0 1084.4785 Q9ULJ3 Q9ULJ3 409 418 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2 0.029591 59.418 By MS/MS By matching 1 1 19377000 9176800 10201000 5339 3043 6066 13359;13360 12955 12955 1 SFSEDTLMDGPAR TWQGPLRRSFSEDTLM TLMDGPARIEPLRARK R S F A R I 1 1 0 2 0 0 1 1 0 0 1 0 1 1 1 2 1 0 0 0 0 0 13 0 1424.6242 M0QZQ6;Q9BRG2 M0QZQ6 123 135 SH2D3A SH2 domain-containing protein 3A yes no 2 0.020612 65.472 By MS/MS 1 2313800 2313800 0 5340 1415 6067 13361 12956 12956 495 2594 0 SFSEDVFQSVK KTKASVRKSFSEDVFQ EDVFQSVKSLLQSQKE K S F V K S 0 0 0 1 0 1 1 0 0 0 0 1 0 2 0 3 0 0 0 2 0 0 11 0 1271.6034 Q9UKA4 Q9UKA4 18 28 AKAP11 A-kinase anchor protein 11 yes yes 2 7.9391E-29 184.98 By MS/MS By MS/MS 1 1 10586000 5296900 5288900 5341 3021 6068 13362;13363 12957;12958 12957 6367 2 SFSEPFGR ENMRQMIRSFSEPFGR SFSEPFGRDLLSISDG R S F G R D 0 1 0 0 0 0 1 1 0 0 0 0 0 2 1 2 0 0 0 0 0 0 8 0 925.42938 C9J3M3;P58340;C9K0D3 C9J3M3 32 39 MLF1 Myeloid leukemia factor 1 yes no 2 0.010339 91.265 By MS/MS By MS/MS 1 1 48836000 23925000 24911000 5342 632 6069 13364;13365 12959;12960 12959 1183 2 SFSISPVR SRSVVRRRSFSISPVR SFSISPVRLRRSRTPL R S F V R L 0 1 0 0 0 0 0 0 0 1 0 0 0 1 1 3 0 0 0 1 0 0 8 0 891.48142 P18583;H7C1M2;H7C2G8 P18583 2009 2016 SON Protein SON yes no 2 0.013156 80.755 By MS/MS By MS/MS 1 2 6514700 3392000 3122800 5343 1725 6070;6071;6072 13366;13367;13368 12961;12962;12963 12961 3242;3243;3244 3 SFSKEELMSSDLEETAGSTSIPK FSKPKKKKSFSKEELM AGSTSIPKRKKSTPKE K S F P K R 1 0 0 1 0 0 4 1 0 1 2 2 1 1 1 6 2 0 0 0 0 0 23 1 2472.1578 O00567 O00567 511 533 NOP56 Nucleolar protein 56 yes yes 2;3 5.609E-09 134.66 By MS/MS By MS/MS 9 8 926540000 489260000 437280000 5344 1443 6073;6074;6075 13369;13370;13371;13372;13373;13374;13375;13376;13377;13378;13379;13380;13381;13382;13383;13384;13385 12964;12965;12966;12967;12968;12969;12970;12971;12972;12973;12974;12975;12976;12977 12965 510 2649;2650;2653;7285 14 SFSKEVEER ARTPATKRSFSKEVEE FSKEVEERSRERPSQP R S F E R S 0 1 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 9 1 1109.5353 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1022 1030 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 0.0083663 62.528 By MS/MS By MS/MS 1 1 6714100 6714100 0 5345 826 6076 13386;13387 12978;12979 12978 1527 2 SFSLASSSNSPISQR NNPPLKSRSFSLASSS SNSPISQRRPSQNAIS R S F Q R R 1 1 1 0 0 1 0 0 0 1 1 0 0 1 1 7 0 0 0 0 0 0 15 0 1566.7638 Q9BXB4 Q9BXB4 172 186 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 2 9.2898E-17 152.9 By MS/MS By MS/MS 9 9 313100000 142090000 171010000 5346 2771 6077;6078;6079 13388;13389;13390;13391;13392;13393;13394;13395;13396;13397;13398;13399;13400;13401;13402;13403;13404;13405 12980;12981;12982;12983;12984;12985;12986;12987;12988;12989;12990;12991;12992;12993;12994;12995 12990 5765;5766;5767;5768;5769;5770 12 SFSLSSNFTTPEEVPTGTK EKGKGLGRSFSLSSNF EEVPTGTKSHRCDECG R S F T K S 0 0 1 0 0 0 2 1 0 0 1 1 0 2 2 4 4 0 0 1 0 0 19 0 2027.9688 B3KRF7;E9PC66;P17029 B3KRF7 144 162 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 yes no 2 0.0122 75.533 By MS/MS By MS/MS 1 1 3676700 3676700 0 5347 539 6080 13406;13407 12996;12997 12996 1014;1015 2 SFSLSWR QKGTTVGRSFSLSWRS RSFSLSWRSHPDVTEP R S F W R S 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 3 0 1 0 0 0 0 7 0 881.43955 H7C1F9;Q2PPJ7 H7C1F9 511 517 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 yes no 2 0.028575 76.1 By MS/MS By matching 1 1 10791000 5501000 5289700 5348 1279 6081 13408;13409 12998 12998 1 SFSMHDLTTIQGDEPVGQRPYQPLPEAK GAITERLRSFSMHDLT YQPLPEAKKKSKPAPS R S F A K K 1 1 0 2 0 3 2 2 1 1 2 1 1 1 4 2 2 0 1 1 0 0 28 1 3140.5237 Q6NUK4 Q6NUK4 150 177 REEP3 Receptor expression-enhancing protein 3 yes yes 3 0.00020493 69.79 By MS/MS By matching 1 1 28737000 16967000 11770000 5349 2309 6082 13410;13411 12999 12999 926 4658 1 SFSMQDLR GALAGRLRSFSMQDLR SFSMQDLRSISDAPAP R S F L R S 0 1 0 1 0 1 0 0 0 0 1 0 1 1 0 2 0 0 0 0 0 0 8 0 982.45422 E5RGS2;Q9H6H4 E5RGS2 150 157 REEP4 Receptor expression-enhancing protein;Receptor expression-enhancing protein 4 yes no 2 0.003476 86.898 By MS/MS By MS/MS 2 2 280060000 145520000 134540000 5350 778 6083;6084 13412;13413;13414;13415 13000;13001;13002;13003;13004 13002 292 1395 5 SFSMQDLTTIR GALSERLRSFSMQDLT MQDLTTIRGDGAPAPS R S F I R G 0 1 0 1 0 1 0 0 0 1 1 0 1 1 0 2 2 0 0 0 0 0 11 0 1297.6336 E7EUF7;A0A1C7CYY3;Q9H902 E7EUF7 157 167 REEP1 Receptor expression-enhancing protein;Receptor expression-enhancing protein 1 yes no 2 0.001027 85.533 By MS/MS By MS/MS 2 2 34515000 16352000 18163000 5351 436 6085;6086 13416;13417;13418;13419 13005;13006;13007 13005 170 816 3 SFSPTMK WINDMKMRSFSPTMKV RSFSPTMKVPVVKEDD R S F M K V 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 2 1 0 0 0 0 0 7 0 796.37893 A3KN83 A3KN83 212 218 SBNO1 Protein strawberry notch homolog 1 yes yes 2 0.017105 109.48 By MS/MS By MS/MS 1 1 9000900 5042200 3958700 5352 458 6087 13420;13421 13008;13009 13008 854 2 SFSRQLDQLSR VNKQDIYKSFSRQLDQ RQLDQLSRLGSSSLTN K S F S R L 0 2 0 1 0 2 0 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 11 1 1335.6895 F8VSC5;A0A0U1RQQ9;Q6P3W7 F8VSC5 277 287 SCYL2 SCY1-like protein 2 yes no 2 0.0045963 80.014 By MS/MS 1 0 0 0 5353 387 6088 13422 13010 13010 712 1 SFSSPENFQR SSAQIIQRSFSSPENF SSPENFQRQAVMNSAL R S F Q R Q 0 1 1 0 0 1 1 0 0 0 0 0 0 2 1 3 0 0 0 0 0 0 10 0 1197.5415 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 14 23 RBM7 RNA-binding protein 7 yes no 2 0.00026035 129.88 By MS/MS By MS/MS 1 1 219630000 107230000 112400000 5354 1067 6089 13423;13424 13011;13012 13011 2016 2 SFSSQRPVDR PKREIAKRSFSSQRPV SSQRPVDRQNRRGNNG R S F D R Q 0 2 0 1 0 1 0 0 0 0 0 0 0 1 1 3 0 0 0 1 0 0 10 1 1177.584 E7EPN9;Q9Y520;H7C5N8 E7EPN9 1544 1553 PRRC2C Protein PRRC2C yes no 3 0.016271 54.066 By MS/MS By MS/MS 1 1 7738900 4400400 3338500 5355 802 6090 13425;13426 13013;13014 13013 1432 2 SFSSSAEEHS LRNHIRSRSFSSSAEE SSSAEEHS________ R S F H S - 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 5 0 0 0 0 0 0 10 0 1066.4203 Q96EQ0 Q96EQ0 295 304 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 2 0.00026694 123.86 By MS/MS By MS/MS 1 1 66127000 34885000 31242000 5356 2642 6091 13427;13428 13015;13016 13015 5450 2 SFSTGSDLGHWVTTPPDIPGSR FGGAFPARSFSTGSDL PPDIPGSRNLHWGEKS R S F S R N 0 1 0 2 0 0 0 3 1 1 1 0 0 1 3 4 3 1 0 1 0 0 22 0 2313.1026 Q96AG3 Q96AG3 32 53 SLC25A46 Solute carrier family 25 member 46 yes yes 3 0.00018082 81.94 By MS/MS By MS/MS 1 1 18113000 8473000 9639700 5357 2621 6092 13429;13430 13017;13018;13019 13018 7775 3 SFTLDDESLK RSSSSRSRSFTLDDES TLDDESLKYLTHEEKD R S F L K Y 0 0 0 2 0 0 1 0 0 0 2 1 0 1 0 2 1 0 0 0 0 0 10 0 1153.5503 Q86WR7;X6RHS9 Q86WR7 43 52 PROSER2 Proline and serine-rich protein 2 yes no 2 2.0533E-05 152.64 By MS/MS By MS/MS 1 2 28238000 15212000 13026000 5358 2412 6093 13431;13432;13433 13020;13021 13020 4922 2 SFTLTITVFTNPPQVATYHR VGRSGRGKSFTLTITV PQVATYHRAIKITVDG K S F H R A 1 1 1 0 0 1 0 0 1 1 1 0 0 2 2 1 5 0 1 2 0 0 20 0 2292.1903 A8MZI9;I3L354;H9KVB1;A0A0D9SEN7;I3L0L0;Q01196;Q13950 A8MZI9 160 179 RUNX1;RUNX2 Runt-related transcription factor 1;Runt-related transcription factor 2 yes no 3 0.031874 41.86 By MS/MS 1 0 0 0 5359 507 6094 13434 13022 13022 1 SFYSTEAVQAHMNDK LWCNEKGKSFYSTEAV VQAHMNDKSHCKLFTD K S F D K S 2 0 1 1 0 1 1 0 1 0 0 1 1 1 0 2 1 0 1 1 0 0 15 0 1726.7621 Q969S3 Q969S3 314 328 ZNF622 Zinc finger protein 622 yes yes 2 0.0094329 72.662 By MS/MS 1 0 0 0 5360 2616 6095 13435 13023 13023 5385;8415 1 SGAHSSASPPR FDWGYEERSGAHSSAS HSSASPPRSRSRDRSH R S G P R S 2 1 0 0 0 0 0 1 1 0 0 0 0 0 2 4 0 0 0 0 0 0 11 0 1052.4999 P18615;A0A0A0MT02;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 174 184 NELFE Negative elongation factor E yes no 2 0.0011418 105.66 By MS/MS By MS/MS 1 1 78629000 14890000 63738000 5361 1726 6096 13436;13437 13024;13025;13026 13025 3249 3 SGAQASSTPLSPTR PSQRRATRSGAQASST STPLSPTRITRLQEKE R S G T R I 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 4 2 0 0 0 0 0 14 0 1358.679 Q3BDU5;P02545 Q3BDU5 12 25 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0012763 104.21 By MS/MS By MS/MS 1 1 150020000 85225000 64793000 5362 1629 6097 13438;13439 13027;13028 13028 3077 2 SGAVQGAGSLGPGSPVR QNEQLRSRSGAVQGAG LGPGSPVRAGASIPSS R S G V R A 2 1 0 0 0 1 0 5 0 0 1 0 0 0 2 3 0 0 0 2 0 0 17 0 1495.7743 Q9P270 Q9P270 35 51 SLAIN2 SLAIN motif-containing protein 2 yes yes 2 0.00030214 106.57 By MS/MS By MS/MS 1 1 16764000 8338200 8425400 5363 2974 6098 13440;13441 13029;13030;13031 13031 6263 3 SGCSEAQPPESPETR IPFGGDTKSGCSEAQP PPESPETRLGQPAAEQ K S G T R L 1 1 0 0 1 1 3 1 0 0 0 0 0 0 3 3 1 0 0 0 0 0 15 0 1630.6893 Q9Y6A5;H0Y8F2 Q9Y6A5 424 438 TACC3 Transforming acidic coiled-coil-containing protein 3 yes no 2 0.0066409 75.968 By MS/MS By MS/MS 1 1 39571000 21432000 18139000 5364 3146 6099 13442;13443 13032;13033 13033 6730 2 SGDEEFKGEDELCDSGR DDAAGDFRSGDEEFKG DELCDSGRQRGPATYP R S G G R Q 0 1 0 3 1 0 4 3 0 0 1 1 0 1 0 2 0 0 0 0 0 0 17 1 1928.7694 M0QYL4;O43823 M0QYL4 153 169 AKAP8 A-kinase anchor protein 8 yes no 2;3 0.00053999 99.881 By MS/MS By MS/MS 2 2 86485000 43027000 43459000 5365 1407 6100 13444;13445;13446;13447 13034;13035;13036 13034 2580 2 SGDETPGSEVPGDK EEDEPEERSGDETPGS GSEVPGDKAAEEQGDD R S G D K A 0 0 0 2 0 0 2 3 0 0 0 1 0 0 2 2 1 0 0 1 0 0 14 0 1373.5947 H3BQZ7;Q1KMD3 H3BQZ7 161 174 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 2 0.0007162 113.54 By MS/MS By MS/MS 1 1 223840000 122700000 101150000 5366 1244 6101 13448;13449 13037;13038;13039 13039 2320 3 SGDSEVYQLGDVSQK LATNEMWRSGDSEVYQ QLGDVSQKTTWHRISV R S G Q K T 0 0 0 2 0 2 1 2 0 0 1 1 0 0 0 3 0 0 1 2 0 0 15 0 1610.7424 C9K0U8;A0A0G2JLD8;E7EUY5;Q04837 C9K0U8 67 81 SSBP1 Single-stranded DNA-binding protein, mitochondrial yes no 2 2.8287E-10 140.01 By MS/MS By MS/MS 1 1 16920000 7101400 9818100 5367 354 6102 13450;13451 13040;13041 13040 2 SGDYSTMEGPELR RDQRLGVKSGDYSTME TMEGPELRHSQPPTPL K S G L R H 0 1 0 1 0 0 2 2 0 0 1 0 1 0 1 2 1 0 1 0 0 0 13 0 1440.6191 Q9C0H5 Q9C0H5 445 457 ARHGAP39 Rho GTPase-activating protein 39 yes yes 2 0.0010948 85.813 By MS/MS By MS/MS 1 1 10730000 4834300 5895500 5368 2795 6103 13452;13453 13042;13043 13042 1109 8456 2 SGEGEVSGLMR VSGVKRSRSGEGEVSG GEVSGLMRKVPRVSLE R S G M R K 0 1 0 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 0 1 0 0 11 0 1120.5183 Q13263;M0R0K9 Q13263 473 483 TRIM28 Transcription intermediary factor 1-beta yes no 2 0.0011794 105.36 By MS/MS By MS/MS 2 2 166560000 83721000 82841000 5369 2054 6104;6105 13454;13455;13456;13457 13044;13045;13046;13047 13046 819 4038 4 SGEISLPIKEEPSPISK DLFDILIKSGEISLPI EEPSPISKMRPVTASI K S G S K M 0 0 0 0 0 0 3 1 0 3 1 2 0 0 3 4 0 0 0 0 0 0 17 1 1809.9724 Q9ULH7;I3L2A0 Q9ULH7 909 925 MKL2 MKL/myocardin-like protein 2 yes no 2;3 1.5825E-10 137.17 By MS/MS By MS/MS 2 2 59005000 36029000 22976000 5370 3042 6106 13458;13459;13460;13461 13048;13049;13050;13051;13052 13052 6409 5 SGEQIFTQDVRPEQLLEGK HRPLANCRSGEQIFTQ PEQLLEGKDAQAIHNW R S G G K D 0 1 0 1 0 3 3 2 0 1 2 1 0 1 1 1 1 0 0 1 0 0 19 1 2173.1015 Q8WXE0 Q8WXE0 471 489 CASKIN2 Caskin-2 yes yes 3 0.015647 51.554 By MS/MS By MS/MS 1 1 24394000 12969000 11425000 5371 2568 6107 13462;13463 13053;13054 13053 5261 2 SGFEPPGDFPFEDYSQHIYR QMVVDSFKSGFEPPGD DYSQHIYRTISDGTIS K S G Y R T 0 1 0 2 0 1 2 2 1 1 0 0 0 3 3 2 0 0 2 0 0 0 20 0 2387.0495 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 119 138 FNBP1L Formin-binding protein 1-like yes no 3 1.572E-17 152.9 By MS/MS By MS/MS 1 1 49381000 26155000 23226000 5372 12 6108 13464;13465 13055;13056 13056 7973 2 SGFGEISSPVIR ________________ EISSPVIREAEVTRTA R S G I R E 0 1 0 0 0 0 1 2 0 2 0 0 0 1 1 3 0 0 0 1 0 0 12 0 1247.651 G3V1T4;P57740 G3V1T4 4 15 NUP107 Nuclear pore complex protein Nup107 yes no 2 1.8023E-26 179.83 By MS/MS By MS/MS 1 1 211700000 112280000 99427000 5373 1066 6109 13466;13467 13057;13058 13058 2012;2013 2 SGGDGGDEVEGSGVGAGEGETVQHFPLAR GSCSSSRRSGGDGGDE VQHFPLARPKSLMQKL R S G A R P 2 1 0 2 0 1 4 9 1 0 1 0 0 1 1 2 1 0 0 3 0 0 29 0 2770.243 Q96DT7 Q96DT7 210 238 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes yes 3 8.2325E-10 105.21 By MS/MS 1 12665000 12665000 0 5374 2638 6110 13468 13059 13059 5435 1 SGGIVISPFRLEELTNR GGGGGGGKSGGIVISP RLEELTNRLASLQQEN K S G N R L 0 2 1 0 0 0 2 2 0 2 2 0 0 1 1 2 1 0 0 1 0 0 17 1 1887.0214 Q16204 Q16204 46 62 CCDC6 Coiled-coil domain-containing protein 6 yes yes 3 0.010586 57.788 By MS/MS 1 3709700 0 3709700 5375 2161 6111 13469 13060 13060 4290 1 SGGLQTPECLSR HPGLMSPRSGGLQTPE QTPECLSREGSPIPHD R S G S R E 0 1 0 0 1 1 1 2 0 0 2 0 0 0 1 2 1 0 0 0 0 0 12 0 1303.619 P85037 P85037 431 442 FOXK1 Forkhead box protein K1 yes yes 2 0.015464 83.292 By MS/MS By MS/MS 2 2 63243000 18530000 44712000 5376 1968 6112;6113 13470;13471;13472;13473 13061;13062;13063 13062 3763;7510 3 SGGNEVSIEER EQVESKRKSGGNEVSI NEVSIEERLGAMDIDT K S G E R L 0 1 1 0 0 0 3 2 0 1 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1175.5418 Q15061 Q15061 431 441 WDR43 WD repeat-containing protein 43 yes yes 2 0.029933 80.312 By MS/MS 1 0 0 0 5377 2127 6114 13474 13064 13064 1 SGGVTEASSLLGGSPR YSTRGDQRSGGVTEAS SLLGGSPRRPCGRKGS R S G P R R 1 1 0 0 0 0 1 4 0 0 2 0 0 0 1 4 1 0 0 1 0 0 16 0 1473.7423 Q92729 Q92729 840 855 PTPRU Receptor-type tyrosine-protein phosphatase U yes yes 2 2.5358E-10 138.98 By MS/MS By MS/MS 1 1 12275000 6895100 5379800 5378 2596 6115 13475;13476 13065;13066 13065 5332 2 SGIDITDFQAK PLNSPLDRSGIDITDF DITDFQAKREKVDSQY R S G A K R 1 0 0 2 0 1 0 1 0 2 0 1 0 1 0 1 1 0 0 0 0 0 11 0 1193.5928 P49790 P49790 343 353 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.0093977 110.64 By MS/MS By MS/MS 1 1 2926800 2926800 0 5379 1859 6116 13477;13478 13067;13068 13067 3594 2 SGITSPVEKR LSHGASQRSGITSPVE ITSPVEKREDPGTGMG R S G K R E 0 1 0 0 0 0 1 1 0 1 0 1 0 0 1 2 1 0 0 1 0 0 10 1 1072.5877 O14686 O14686 2636 2645 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.015301 72.289 By matching By MS/MS 1 1 34480000 19587000 14894000 5380 1454 6117 13479;13480 13069 13069 2702 1 SGLEELVLSEMNSPSR ILTNSKSRSGLEELVL SEMNSPSRTQTGDSSS R S G S R T 0 1 1 0 0 0 3 1 0 0 3 0 1 0 1 4 0 0 0 1 0 0 16 0 1746.8458 A0A075B793;Q4V328;A0A087WXA6;A0A087WT45 A0A075B793 612 627 GRIPAP1 GRIP1-associated protein 1 yes no 2 0.0014982 76.82 By matching By MS/MS 1 1 10876000 4909500 5966200 5381 21 6118 13481;13482 13070 13070 9 41 1 SGLELTELQNMTVPEDDNISNDSNDFTEVENGQINSK ________________ ENGQINSKFISDRESR K S G S K F 0 0 6 4 0 2 5 2 0 2 3 1 1 1 1 4 3 0 0 2 0 0 37 0 4095.8339 F8VX12;F8VX04;Q9H2H9 F8VX12 6 42 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 3 0.0076461 42.024 By MS/MS 1 16977000 0 16977000 5382 1024 6119 13483 13071 13071 370 1918;7157;7158 1 SGLSDIILGK EAALFLKKSGLSDIIL LSDIILGKIWDLADPE K S G G K I 0 0 0 1 0 0 0 2 0 2 2 1 0 0 0 2 0 0 0 0 0 0 10 0 1001.5757 M0R165;Q9UBC2;K7EJR2;M0R330;M0QX30;M0R1V5 M0R165 46 55 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 2 0.013407 70.728 By MS/MS By MS/MS 1 1 20703000 10137000 10566000 5383 1422 6120 13484;13485 13072;13073 13072 2611 2 SGLSLEELR FSSVAMTRSGLSLEEL GLSLEELRIVEGQGQS R S G L R I 0 1 0 0 0 0 2 1 0 0 3 0 0 0 0 2 0 0 0 0 0 0 9 0 1002.5346 A0A087WWA3;Q4R9M9;O60333 A0A087WWA3 1028 1036 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B yes no 2 0.0040286 89.356 By MS/MS By MS/MS 1 1 28514000 13155000 15359000 5384 86 6121 13486;13487 13074;13075;13076 13076 154 3 SGLTVPTSPK DSGSDALRSGLTVPTS LTVPTSPKGRLLDRRS R S G P K G 0 0 0 0 0 0 0 1 0 0 1 1 0 0 2 2 2 0 0 1 0 0 10 0 985.54441 Q53EL6;Q5VZS7 Q53EL6 87 96 PDCD4 Programmed cell death protein 4 yes no 1;2 3.4082E-07 158.56 By MS/MS By MS/MS 2 2 990380000 375990000 614400000 5385 2199 6122 13488;13489;13490;13491 13077;13078;13079 13079 4400 3 SGMSPEQSR FSASPMLKSGMSPEQS GMSPEQSRFQSDSSSY K S G S R F 0 1 0 0 0 1 1 1 0 0 0 0 1 0 1 3 0 0 0 0 0 0 9 0 977.42364 Q9UQ35 Q9UQ35 1129 1137 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.022788 64.224 By MS/MS 1 5720100 0 5720100 5386 3074 6123 13492 13080 13080 6566 1 SGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEAR ARDELGGRSGPEAEGL SPSKEEARRSSQPPAD R S G A R R 2 1 0 3 0 0 8 5 0 0 3 1 1 1 3 7 2 0 1 1 0 0 39 1 4088.7804 Q10570 Q10570 725 763 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 3 1.7671E-05 62.401 By MS/MS By MS/MS 1 1 107410000 55717000 51688000 5387 2023 6124 13493;13494 13081;13082;13083 13083 800 3924;3925;3926 3 SGPFGQIFRPDNFVFGQSGAGNNWAK PGTMDSVRSGPFGQIF GAGNNWAKGHYTEGAE R S G A K G 2 1 3 1 0 2 0 5 0 1 0 1 0 4 2 2 0 1 0 1 0 0 26 1 2797.3361 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;M0R1I1;P68371;P04350;M0QY85;M0QZL7;M0R278 Q5JP53 60 85 TUBB;TUBB2B;TUBB2A;TUBB4A;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 3 1.5543E-06 95.666 By matching By MS/MS 1 1 32568000 25599000 6969000 5388 1653;1958 6125 13495;13496 13084;13085 13084 2 SGPLEACYGELGQSR SRMLRQQRSGPLEACY YGELGQSRMYFNASGP R S G S R M 1 1 0 0 1 1 2 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 15 0 1622.7359 Q9NXD2 Q9NXD2 701 715 MTMR10 Myotubularin-related protein 10 yes yes 2 3.2319E-10 138.2 By MS/MS By MS/MS 1 1 18537000 8838900 9697600 5389 2941 6126 13497;13498 13086;13087 13087 8480 2 SGQSLTVPESTYTSIQGDPQR KPGQLVNKSGQSLTVP SIQGDPQRSPSSCNDL K S G Q R S 0 1 0 1 0 3 1 2 0 1 1 0 0 0 2 4 3 0 1 1 0 0 21 0 2250.0764 Q9NWQ8 Q9NWQ8 330 350 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2;3 8.3607E-74 195.6 By MS/MS By MS/MS 2 2 200400000 97621000 102780000 5390 2936 6127 13499;13500;13501;13502 13088;13089;13090;13091 13091 8475 4 SGSAAQAEGLCK AGLRKRGRSGSAAQAE AQAEGLCKQWLQRAWQ R S G C K Q 3 0 0 0 1 1 1 2 0 0 1 1 0 0 0 2 0 0 0 0 0 0 12 0 1177.5397 F8WF93;H7BZZ2;F8WE30;H7C0X4;Q92685 F8WF93 11 22 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase yes no 2 0.0016509 89.992 By MS/MS By MS/MS 1 1 25412000 14596000 10816000 5391 1056 6128 13503;13504 13092;13093;13094 13093 1996 3 SGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASK DLNKTRLRSGSALLQS SSQSSASKASQEDANE R S G S K A 3 0 0 4 0 3 4 1 0 0 4 3 0 0 3 11 1 0 0 0 0 0 37 2 3834.7767 Q5VTR2 Q5VTR2 515 551 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 3;4 1.9711E-16 114.59 By MS/MS By MS/MS 3 3 252730000 118150000 134580000 5392 2266 6129;6130 13505;13506;13507;13508;13509;13510 13095;13096;13097;13098;13099 13098 4550;4551 5 SGSDRNSAILSDPSVFSPLNK RKPRGRPRSGSDRNSA SVFSPLNKSETKSGDK R S G N K S 1 1 2 2 0 0 0 1 0 1 2 1 0 1 2 6 0 0 0 1 0 0 21 1 2190.0917 Q03164;E9PR05 Q03164 181 201 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3 0.00094647 70.501 By MS/MS By MS/MS 1 1 10493000 5020700 5472700 5393 1994 6131 13511;13512 13100;13101 13101 3838;3839 2 SGSEEAVTDPGER LSTGYHTRSGSEEAVT AVTDPGEREAGASLYQ R S G E R E 1 1 0 1 0 0 3 2 0 0 0 0 0 0 1 2 1 0 0 1 0 0 13 0 1332.5794 Q92508 Q92508 1619 1631 PIEZO1 Piezo-type mechanosensitive ion channel component 1 yes yes 2 0.00046776 96.866 By matching By MS/MS 1 1 11818000 5952100 5866000 5394 2578 6132 13513;13514 13102 13102 5289;5290 0 SGSETPDGPLSPGKMEDISPVQTDALDSVR DQDDMAEKSGSETPDG TDALDSVRERLHGGKG K S G V R E 1 1 0 4 0 1 2 3 0 1 2 1 1 0 4 5 2 0 0 2 0 0 30 1 3084.4557 Q8IWI9 Q8IWI9 1412 1441 MGA MAX gene-associated protein yes yes 3 8.3329E-05 71.085 By MS/MS 1 11004000 0 11004000 5395 2429 6133 13515 13103 13103 984 4965 1 SGSGISVISSTSVDQR PPSFRRVRSGSGISVI SSTSVDQRLPEEPVLE R S G Q R L 0 1 0 1 0 1 0 2 0 2 0 0 0 0 0 6 1 0 0 2 0 0 16 0 1578.7849 F8W7U0;Q15811;D6PAW0;C9JQZ7;A8CTZ0 F8W7U0 313 328 ITSN1 Intersectin-1 yes no 2 0.007011 74.141 By matching By MS/MS 1 1 13865000 6815300 7049400 + 5396 1037 6134 13516;13517 13104 13104 1957;1958 1 SGSGSVGNGSSRYSPSQNSPIHHIPSR SIQHSPERSGSGSVGN PIHHIPSRRSPAKTIA R S G S R R 0 2 2 0 0 1 0 4 2 2 0 0 0 0 3 9 0 0 1 1 0 0 27 1 2751.3073 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;H0YF00;E9PJA7 Q9NYF8 272 298 BCLAF1 Bcl-2-associated transcription factor 1 no no 3;4 4.0382E-09 125.37 By MS/MS By MS/MS 5 5 311480000 143400000 168080000 5397 2947;888 6135;6136 13518;13519;13520;13521;13522;13523;13524;13525;13526;13527 13105;13106;13107;13108;13109;13110;13111;13112;13113;13114;13115 13110 36;37;152 1657;1658;1659;1660;1661;1662 11 SGSGSVGNGSSRYSPSQNSPIHHIPSRR SIQHSPERSGSGSVGN IHHIPSRRSPAKTIAP R S G R R S 0 3 2 0 0 1 0 4 2 2 0 0 0 0 3 9 0 0 1 1 0 0 28 2 2907.4084 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;H0YF00;E9PJA7 Q9NYF8 272 299 BCLAF1 Bcl-2-associated transcription factor 1 no no 4 0.0019114 56.131 By MS/MS 1 45019000 0 45019000 5398 2947;888 6137 13528 13116;13117 13116 36;37;152 1657;1658;1659;1660;1661;1662 2 SGSIVELIAGGGSSCSPVLSR EESGGRSRSGSIVELI SCSPVLSRKQKGKVLL R S G S R K 1 1 0 0 1 0 1 4 0 2 2 0 0 0 1 6 0 0 0 2 0 0 21 0 2032.0259 P42858 P42858 417 437 HTT Huntingtin yes yes 2 8.0322E-21 138.54 By MS/MS By MS/MS 1 1 10908000 10908000 0 5399 1830 6138 13529;13530 13118;13119 13119 3457;3458;3459;3460 2 SGSLDDSFSDFQELPASSK QDFQDASKSGSLDDSF QELPASSKTSNSQHGN K S G S K T 1 0 0 3 0 1 1 1 0 0 2 1 0 2 1 6 0 0 0 0 0 0 19 0 2015.896 Q9UMZ2 Q9UMZ2 467 485 SYNRG Synergin gamma yes yes 2 3.1722E-102 213.64 By MS/MS By MS/MS 1 1 30369000 18139000 12229000 5400 3056 6139 13531;13532 13120;13121 13120 6454 2 SGSLDSELSVSPK PSAPSIAKSGSLDSEL SELSVSPKRNSISRTH K S G P K R 0 0 0 1 0 0 1 1 0 0 2 1 0 0 1 5 0 0 0 1 0 0 13 0 1304.646 Q12802;A0A087WTD7;A8MYJ1 Q12802 2718 2730 AKAP13 A-kinase anchor protein 13 yes no 2 0.0023208 87.184 By MS/MS By matching 1 1 12398000 6756300 5641700 5401 2026 6140 13533;13534 13122 13122 3942 1 SGSMDPSGAHPSVR RMSRSSGRSGSMDPSG SGAHPSVRQTPSRQPP R S G V R Q 1 1 0 1 0 0 0 2 1 0 0 0 1 0 2 4 0 0 0 1 0 0 14 0 1383.6201 Q07666 Q07666 18 31 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 2 0.0013589 81.185 By MS/MS By matching 1 1 331300000 158860000 172440000 5402 2010 6141 13535;13536 13123 13123 793 3877 1 SGSNGSVVSLEQQQK AAFQRKRRSGSNGSVV VSLEQQQKIEEQKKWL R S G Q K I 0 0 1 0 0 3 1 2 0 0 1 1 0 0 0 4 0 0 0 2 0 0 15 0 1546.7587 Q2M1P5 Q2M1P5 893 907 KIF7 Kinesin-like protein KIF7 yes yes 2 1.3017E-26 167.92 By MS/MS By MS/MS 2 2 43978000 21521000 22457000 5403 2178 6142;6143 13537;13538;13539;13540 13124;13125;13126;13127 13124 105 4330 4 SGSPAPETTNESVPFAQHSSLDSR PRPASPARSGSPAPET QHSSLDSRIEMLLKEQ R S G S R I 2 1 1 1 0 1 2 1 1 0 1 0 0 1 3 6 2 0 0 1 0 0 24 0 2500.1466 O15047 O15047 468 491 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 3 0.0029254 62.823 By MS/MS By MS/MS 2 2 142430000 74832000 67600000 5404 1468 6144;6145 13541;13542;13543;13544 13128;13129;13130;13131 13130 2742;2743 4 SGSPKLDPSEVYLK PFPPSIIRSGSPKLDP DPSEVYLKSKTLYEDK R S G L K S 0 0 0 1 0 0 1 1 0 0 2 2 0 0 2 3 0 0 1 1 0 0 14 1 1518.793 Q5TCQ9 Q5TCQ9 722 735 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 yes yes 2 0.0033889 88.319 By MS/MS By matching 1 1 19458000 7941700 11516000 5405 2253 6146 13545;13546 13132 13132 4508 1 SGSPNLPHSVSSYK PHREKYPRSGSPNLPH PHSVSSYKSREDGYYR R S G Y K S 0 0 1 0 0 0 0 1 1 0 1 1 0 0 2 5 0 0 1 1 0 0 14 0 1458.7103 Q5T481 Q5T481 740 753 RBM20 RNA-binding protein 20 yes yes 2 0.00094301 95.073 By MS/MS By MS/MS 1 1 27041000 13426000 13615000 5406 2239 6147 13547;13548 13133;13134 13133 4487 2 SGSPRPTEPTDFLMLFEGSPSGK TTQVSQPRSGSPRPTE FEGSPSGKKRPASLST R S G G K K 0 1 0 1 0 0 2 3 0 0 2 1 1 2 4 4 2 0 0 0 0 0 23 1 2436.1631 Q9UPN4;I3L2J8 Q9UPN4 87 109 CEP131 Centrosomal protein of 131 kDa yes no 3 3.5496E-09 134.83 By MS/MS By MS/MS 3 3 50970000 26804000 24166000 5407 3064 6148;6149;6150 13549;13550;13551;13552;13553;13554 13135;13136;13137;13138;13139;13140 13136 1215 6470;6471;6472;7915;7916 5 SGSSPGLR RTPSRRSRSGSSPGLR SGSSPGLRDGSGTPSR R S G L R D 0 1 0 0 0 0 0 2 0 0 1 0 0 0 1 3 0 0 0 0 0 0 8 0 759.38752 Q9UQ35 Q9UQ35 1441 1448 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.020074 73.233 By MS/MS By matching 1 1 5479300 3276700 2202600 5408 3074 6151 13555;13556 13141 13141 6567 1 SGSSQELDVK TPLGQRSRSGSSQELD SSQELDVKPSASPQER R S G V K P 0 0 0 1 0 1 1 1 0 0 1 1 0 0 0 3 0 0 0 1 0 0 10 0 1048.5037 Q9UQ35 Q9UQ35 1539 1548 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.00074748 133.88 By MS/MS By MS/MS 2 2 58300000 31637000 26663000 5409 3074 6152;6153 13557;13558;13559;13560 13142;13143;13144;13145 13142 6568;6569;6570 4 SGSSQELDVKPSASPQER TPLGQRSRSGSSQELD PSASPQERSESDSSPD R S G E R S 1 1 0 1 0 2 2 1 0 0 1 1 0 0 2 5 0 0 0 1 0 0 18 1 1900.9126 Q9UQ35 Q9UQ35 1539 1556 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.00077761 83.727 By MS/MS By MS/MS 3 3 86535000 41350000 45185000 5410 3074 6154;6155;6156 13561;13562;13563;13564;13565;13566 13146;13147;13148;13149;13150 13146 6568;6569;6570;6571;6572 5 SGSSSPDSEITELK PRDTYSDRSGSSSPDS DSEITELKFPSINHD_ R S G L K F 0 0 0 1 0 0 2 1 0 1 1 1 0 0 1 5 1 0 0 0 0 0 14 0 1435.6678 P17812 P17812 571 584 CTPS1 CTP synthase 1 yes yes 2 0.00082617 104.09 By MS/MS By MS/MS 3 3 180740000 95784000 84957000 5411 1719 6157;6158 13567;13568;13569;13570;13571;13572 13151;13152;13153;13154 13152 3230;3231;3232;3233 4 SGSSSPDSEITELKFPSINHD PRDTYSDRSGSSSPDS KFPSINHD________ R S G H D - 0 0 1 2 0 0 2 1 1 2 1 1 0 1 2 6 1 0 0 0 0 0 21 1 2246.0339 P17812 P17812 571 591 CTPS1 CTP synthase 1 yes yes 2;3 0.00082758 78.674 By MS/MS By MS/MS 4 4 355960000 189110000 166850000 5412 1719 6159;6160 13573;13574;13575;13576;13577;13578;13579;13580 13155;13156;13157;13158;13159;13160 13159 3230;3231;3232;3233 6 SGSTSPLGFAR PRSSAIRRSGSTSPLG TSPLGFARASPSPPAH R S G A R A 1 1 0 0 0 0 0 2 0 0 1 0 0 1 1 3 1 0 0 0 0 0 11 0 1078.5407 O75385 O75385 465 475 ULK1 Serine/threonine-protein kinase ULK1 yes yes 2 0.0054593 76.24 By MS/MS By MS/MS 2 2 21858000 12135000 9723200 5413 1543 6161;6162 13581;13582;13583;13584 13161;13162 13162 2916;2917 2 SGSWAAIYQDIR KEFEQIDKSGSWAAIY AAIYQDIRHEASDFPC K S G I R H 2 1 0 1 0 1 0 1 0 2 0 0 0 0 0 2 0 1 1 0 0 0 12 0 1365.6677 P18031 P18031 13 24 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 yes yes 2 0.0015935 97.734 By MS/MS By MS/MS 1 1 29915000 15377000 14538000 5414 1721 6163 13585;13586 13163;13164 13163 8235 2 SGSYSYLEER RYDSLLGRSGSYSYLE SYSYLEERKPYSSRLE R S G E R K 0 1 0 0 0 0 2 1 0 0 1 0 0 0 0 3 0 0 2 0 0 0 10 0 1189.5251 O14974;A0A0U1RQZ1;H0YIM2;H0YIS3 O14974 908 917 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.015042 71.349 By MS/MS By matching 2 2 39607000 20803000 18804000 5415 1463 6164 13587;13588;13589;13590 13165;13166 13166 2722;8191 1 SGTAETEPVEQDSSQPSLPLVR VEYEGDLKSGTAETEP QPSLPLVRADDPLRLD K S G V R A 1 1 0 1 0 2 3 1 0 0 2 0 0 0 3 4 2 0 0 2 0 0 22 0 2326.1288 Q12888;A6NNK5;C9JXV0;H7C3N7 Q12888 818 839 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2;3 0.00047336 83.849 By MS/MS By MS/MS 3 2 62351000 37380000 24971000 5416 2031 6165 13591;13592;13593;13594;13595 13167;13168;13169;13170 13168 3966;3967 4 SGTLSPEIFEK TDSASWIRSGTLSPEI LSPEIFEKSTIDSNEN R S G E K S 0 0 0 0 0 0 2 1 0 1 1 1 0 1 1 2 1 0 0 0 0 0 11 0 1206.6132 O60673 O60673 1720 1730 REV3L DNA polymerase zeta catalytic subunit yes yes 2 0.0021036 108.32 By MS/MS By MS/MS 1 1 3779300 3779300 0 5417 1524 6166 13596;13597 13171;13172 13171 2877 2 SGTPTQDEMMDKPTSSSVDTMSLLSK GTPVRDERSGTPTQDE DTMSLLSKIISPGSST R S G S K I 0 0 0 3 0 1 1 1 0 0 2 2 3 0 2 6 4 0 0 1 0 0 26 1 2772.2504 Q5VT52 Q5VT52 730 755 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.00036333 74.561 By MS/MS By MS/MS 1 1 64799000 35617000 29182000 5418 2264 6167 13598;13599 13173;13174 13174 909;910 4544;7653 2 SGTSQEELR CPVVGMSRSGTSQEEL GTSQEELRIVEGQGQG R S G L R I 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 2 1 0 0 0 0 0 9 0 1005.4727 Q12756;F8W8V9;H7C437 Q12756 934 942 KIF1A Kinesin-like protein KIF1A;Kinesin-like protein yes no 2 0.023396 63.694 By MS/MS 1 8867500 8867500 0 5419 2024 6168 13600 13175 13175 3929 1 SGVPEASPIDLSGYQER S G E R 1 1 0 1 0 1 2 2 0 1 1 0 0 0 2 3 0 0 1 1 0 0 17 0 1803.8639 REV__O43283 yes yes 2 0.02708 55.33 By MS/MS By matching 2 1 43911000 33197000 10714000 + 5420 3199 6169 13601;13602;13603 13176 13176 6796;6797 1 SGVSITIDDPVR RRSISQQKSGVSITID ITIDDPVRTAQVPSPP K S G V R T 0 1 0 2 0 0 0 1 0 2 0 0 0 0 1 2 1 0 0 2 0 0 12 0 1257.6565 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 929 940 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 2 0.0072033 89.189 By MS/MS By MS/MS 1 1 23436000 11787000 11649000 5421 810;1073 6170 13604;13605 13177;13178 13177 1455;1456 1 SGVSLAALK AVAASKERSGVSLAAL GVSLAALKKALAAAGY R S G L K K 2 0 0 0 0 0 0 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 9 0 844.50182 P10412;P16403;P16402 P10412 55 63 HIST1H1E;HIST1H1C;HIST1H1D Histone H1.4;Histone H1.2;Histone H1.3 yes no 2 0.0035131 113.26 By MS/MS By MS/MS 1 1 50205000 23877000 26328000 5422 1674 6171 13606;13607 13179;13180 13179 2 SGVTNMSSPHK SQTVARNRSGVTNMSS TNMSSPHKNSVPSSLN R S G H K N 0 0 1 0 0 0 0 1 1 0 0 1 1 0 1 3 1 0 0 1 0 0 11 0 1143.5343 Q9NVG8 Q9NVG8 177 187 TBC1D13 TBC1 domain family member 13 yes yes 1 0.026863 47.991 By MS/MS By matching 1 1 3956000 2408000 1548000 5423 2925 6172 13608;13609 13181 13181 1162 6179 0 SGYHDDSDEDLLE DTASHTNKSGYHDDSD DSDEDLLE________ K S G L E - 0 0 0 4 0 0 2 1 1 0 2 0 0 0 0 2 0 0 1 0 0 0 13 0 1493.5794 Q99523 Q99523 819 831 SORT1 Sortilin yes yes 2 0.0010149 95.401 By MS/MS By MS/MS 1 1 113500000 57976000 55524000 5424 2722 6173 13610;13611 13182;13183 13182 5649;5650 2 SGYMSDSDLMGK DSDEVDLKSGYMSDSD SDSDLMGKTMTEDDDI K S G G K T 0 0 0 2 0 0 0 2 0 0 1 1 2 0 0 3 0 0 1 0 0 0 12 0 1289.5268 A0A0A0MRJ3;Q8NEY1 A0A0A0MRJ3 400 411 NAV1 Neuron navigator 1 yes no 2 0.0032152 78.287 By matching By MS/MS 1 1 6692600 3520400 3172200 5425 219 6174 13612;13613 13184 13184 91;92 384 1 SHDDGNIDLESDSFLK EESESKTKSHDDGNID LESDSFLKFDSEPSAV K S H L K F 0 0 1 4 0 0 1 1 1 1 2 1 0 1 0 3 0 0 0 0 0 0 16 0 1790.7959 P18583 P18583 142 157 SON Protein SON yes yes 2 0.00018007 113.86 By matching By MS/MS 1 1 12851000 6879800 5970700 5426 1725 6175 13614;13615 13185 13185 3245 1 SHGHREGMLQSDQTGLSRK ETFHSTFKSHGHREGM DQTGLSRKRKLQGMFC K S H R K R 0 2 0 1 0 2 1 3 2 0 2 1 1 0 0 3 1 0 0 0 0 0 19 2 2123.029 A0A087WXL3;O75417 A0A087WXL3 2636 2654 POLQ DNA polymerase theta yes no 3 0.032255 40.28 By MS/MS 1 0 0 0 5427 107 6176 13616 13186 13186 39 1 SHGLEPAAPSPR LQLEAHLRSHGLEPAA EPAAPSPRLRPEESLD R S H P R L 2 1 0 0 0 0 1 1 1 0 1 0 0 0 3 2 0 0 0 0 0 0 12 0 1217.6153 Q9ULL5 Q9ULL5 35 46 PRR12 Proline-rich protein 12 yes yes 3 0.018458 61.233 By MS/MS 1 0 0 0 5428 3045 6177 13617 13187 13187 6420 1 SHILEDDENSVDISMLK ASGRPRQRSHILEDDE SVDISMLKTGSSLLKE R S H L K T 0 0 1 3 0 0 2 0 1 2 2 1 1 0 0 3 0 0 0 1 0 0 17 0 1943.9146 O75717 O75717 374 390 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2;3 3.1969E-07 131.54 By MS/MS By MS/MS 2 2 84694000 41110000 43584000 5429 1555 6178 13618;13619;13620;13621 13188;13189;13190;13191 13190 563 2940 4 SHISDQSPLSSK IQPLCPERSHISDQSP DQSPLSSKRKALEESE R S H S K R 0 0 0 1 0 1 0 0 1 1 1 1 0 0 1 5 0 0 0 0 0 0 12 0 1284.631 P42166 P42166 345 356 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.0087632 75.483 By MS/MS By MS/MS 1 1 34986000 21730000 13256000 5430 1823 6179 13622;13623 13192;13193 13192 3434;3435 2 SHIWHVYNENSNRQK KKPKFSSKSHIWHVYN NENSNRQKLEHVKVNK K S H Q K L 0 1 3 0 0 1 1 0 2 1 0 1 0 0 0 2 0 1 1 1 0 0 15 1 1910.9136 D6RJB7;Q8N7Z5 D6RJB7 643 657 ANKRD31 Putative ankyrin repeat domain-containing protein 31 yes no 2 0.013034 75.483 By MS/MS By matching 1 1 58841000 31049000 27791000 5431 769 6180 13624;13625 13194 13194 1378 1 SHNNFVAILDLPEGEHQYK WSKLPLTRSHNNFVAI PEGEHQYKFFVDGQWT R S H Y K F 1 0 2 1 0 1 2 1 2 1 2 1 0 1 1 1 0 0 1 1 0 0 19 0 2210.0756 Q9Y478 Q9Y478 108 126 PRKAB1 5-AMP-activated protein kinase subunit beta-1 yes yes 3 5.3449E-05 112.42 By MS/MS By MS/MS 1 1 127220000 60337000 66879000 5432 3115 6181 13626;13627 13195;13196 13195 6677 2 SHRCYDLIPTSSKLVVFDTSLQVK ________________ FDTSLQVKKAFFALVT K S H V K K 0 1 0 2 1 1 0 0 1 1 3 2 0 1 1 4 2 0 1 3 0 0 24 2 2792.4531 F8VSH3;F8VRY2;F8VSL2;F8VVA3;H0YIC9;P54619 F8VSH3 3 26 PRKAG1 5-AMP-activated protein kinase subunit gamma-1 yes no 3 0.017711 48.18 By matching By MS/MS 1 1 17775000 10555000 7220300 5433 1008 6182 13628;13629 13197 13197 1894;1895 1 SHRHQGLGGTLPPRTFINR WNGERLNKSHRHQGLG PPRTFINRNAAGTGRM K S H N R N 0 3 1 0 0 1 0 3 2 1 2 0 0 1 2 1 2 0 0 0 0 0 19 2 2143.1511 O15234;J3KSY7 O15234 281 299 CASC3 Protein CASC3 yes no 3 0.004885 66.022 By MS/MS By matching 1 1 71743000 27389000 44354000 5434 1477 6183 13630;13631 13198 13198 7305;7306 1 SHSITNMEIGGLK GPVGSVVKSHSITNME NMEIGGLKIYDILSDN K S H L K I 0 0 1 0 0 0 1 2 1 2 1 1 1 0 0 2 1 0 0 0 0 0 13 0 1385.6973 Q96RT1 Q96RT1 870 882 ERBB2IP Protein LAP2 yes yes 2 0.0011439 102.52 By MS/MS By MS/MS 1 1 8541500 5141800 3399700 5435 2705 6184 13632;13633 13199;13200 13199 5582 2 SHSPSIDGTPK TKTVTPKRSHSPSIDG PSIDGTPKRLKDVEKF R S H P K R 0 0 0 1 0 0 0 1 1 1 0 1 0 0 2 3 1 0 0 0 0 0 11 0 1124.5462 Q9BWT3;A0A0C4DH56 Q9BWT3 646 656 PAPOLG Poly(A) polymerase gamma yes no 2 0.0021188 92.792 By MS/MS By matching 1 1 17415000 10594000 6821000 5436 2768 6185 13634;13635 13201 13201 5761 1 SHSPSSPDPDTPSPVGDSR SPHLDSSRSHSPSSPD PSPVGDSRALQASRNT R S H S R A 0 1 0 3 0 0 0 1 1 0 0 0 0 0 5 6 1 0 0 1 0 0 19 0 1920.845 E9PNJ4;G0XQ39;Q13586;H0YDB2 E9PNJ4 443 461 STIM1 Stromal interaction molecule 1 yes no 2;3 5.4789E-05 100.53 By MS/MS By MS/MS 2 2 34329000 18118000 16211000 5437 916 6186 13636;13637;13638;13639 13202;13203;13204 13204 1706;1707;1708 3 SHSQASLAGPGPVDPSNR YWNGKLLRSHSQASLA GPVDPSNRSNSMLELA R S H N R S 2 1 1 1 0 1 0 2 1 0 1 0 0 0 3 4 0 0 0 1 0 0 18 0 1775.8551 A6PVU7;Q9P2M7;A2A3M4 A6PVU7 135 152 CGN Cingulin yes no 2;3 6.547E-10 136.61 By MS/MS By MS/MS 2 2 44330000 26196000 18133000 5438 488 6187 13640;13641;13642;13643 13205;13206;13207;13208 13205 886;887;888 4 SHSSPSQIPK LQDSEKKRSHSSPSQI SSPSQIPKKILRYVK_ R S H P K K 0 0 0 0 0 1 0 0 1 1 0 1 0 0 2 4 0 0 0 0 0 0 10 0 1066.5407 H0YN99;Q9H792 H0YN99 1033 1042 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.00061687 131.42 By MS/MS By matching 1 1 5122000 2202300 2919700 5439 1218 6188 13644;13645 13209 13209 2278 1 SHSVPENMVEPPLSGR PRGPPVNRSHSVPENM VEPPLSGRVGRCRSLS R S H G R V 0 1 1 0 0 0 2 1 1 0 1 0 1 0 3 3 0 0 0 2 0 0 16 0 1734.8359 A1L390;G3V311 A1L390 1079 1094 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.018258 65.528 By MS/MS 1 0 0 0 5440 445 6189 13646 13210 13210 173 830 1 SHTSEGAHLDITPNSGAAGNSAGPK TSEGTRSRSHTSEGAH AGNSAGPKSMEVSC__ R S H P K S 4 0 2 1 0 0 1 4 2 1 1 1 0 0 2 4 2 0 0 0 0 0 25 0 2375.1102 E5RJY1;E7ESM1;Q92597 E5RJY1 73 97 NDRG1 Protein NDRG1 yes no 3 9.7923E-07 90.964 By MS/MS By MS/MS 1 1 35513000 18964000 16549000 5441 787 6190 13647;13648 13211;13212 13211 1401;7065 2 SHVEDGDIAGAPASSPEAPPAEQDPVQLK RQQLSEMKSHVEDGDI EQDPVQLKTQLEWTEA K S H L K T 5 0 0 3 0 2 3 2 1 1 1 1 0 0 5 3 0 0 0 2 0 0 29 0 2911.3836 A0A087WU26;F8W7S5;A0A087WVV2;A0A0A0MRV0;Q9P2E9 A0A087WU26 200 228 RRBP1 Ribosome-binding protein 1 yes no 3 3.5557E-05 74.675 By MS/MS By MS/MS 1 1 60047000 27204000 32843000 5442 50 6191 13649;13650 13213;13214 13213 91 2 SHVSSEPYEPISPPQVPVVHEK RPGKSPERSHVSSEPY QVPVVHEKQDSLLLLS R S H E K Q 0 0 0 0 0 1 3 0 2 1 0 1 0 0 5 4 0 0 1 4 0 0 22 0 2441.2227 A0A088AWL3;O75376;E7EVK1;J3KS29;J3QKP0 A0A088AWL3 2044 2065 NCOR1 Nuclear receptor corepressor 1 yes no 3 1.8907E-05 95.988 By MS/MS 1 12279000 12279000 0 5443 177 6192 13651 13215 13215 292 1 SHWDDSTSDSELEK PSPKESGRSHWDDSTS TSDSELEKGAREQPEK R S H E K G 0 0 0 3 0 0 2 0 1 0 1 1 0 0 0 4 1 1 0 0 0 0 14 0 1634.6696 E9PGC8;P78559 E9PGC8 2337 2350 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 1.7676E-43 190.27 By MS/MS By MS/MS 1 1 18938000 9821600 9116300 5444 872 6193 13652;13653 13216;13217 13216 1609;1610;1611;7109 2 SHYADVDPENQNFLLESNLGK PTKQAALKSHYADVDP LLESNLGKKKYETEFN K S H G K K 1 0 3 2 0 1 2 1 1 0 3 1 0 1 1 2 0 0 1 1 0 0 21 0 2389.1186 F8VUY8;Q96QD8 F8VUY8 39 59 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 2;3 4.3093E-11 138.81 By MS/MS By MS/MS 2 2 304320000 160820000 143490000 5445 1013 6194 13654;13655;13656;13657 13218;13219;13220;13221;13222 13219 8139 5 SHYADVDPENQNFLLESNLGKK PTKQAALKSHYADVDP LESNLGKKKYETEFNS K S H K K K 1 0 3 2 0 1 2 1 1 0 3 2 0 1 1 2 0 0 1 1 0 0 22 1 2517.2136 F8VUY8;Q96QD8 F8VUY8 39 60 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 3 2.8269E-08 133.21 By MS/MS By MS/MS 1 1 123910000 55305000 68603000 5446 1013 6195 13658;13659 13223;13224;13225;13226 13226 8139 4 SIAEQAHELAYDPNYMSPFAQFACDNGLNVR ESIQQTARSIAEQAHE CDNGLNVRGGKPDDIT R S I V R G 5 1 3 2 1 2 2 1 1 1 2 0 1 2 2 2 0 0 2 1 0 0 31 0 3527.5874 Q8NI37 Q8NI37 255 285 PPTC7 Protein phosphatase PTC7 homolog yes yes 3 0.026479 43.291 By matching By MS/MS 1 1 10339000 4979900 5359500 5447 2529 6196 13660;13661 13227 13227 5166 0 SICTTVLELLDK EKVESELRSICTTVLE TVLELLDKYLIANATN R S I D K Y 0 0 0 1 1 0 1 0 0 1 3 1 0 0 0 1 2 0 0 1 0 0 12 0 1390.7378 P27348;E9PG15 P27348 92 103 YWHAQ 14-3-3 protein theta yes no 2 0.001778 100.69 By MS/MS 1 3019500 0 3019500 5448 1768 6197 13662 13228 13228 1 SIDDEITEAKSGTATPQR RTYLLDFRSIDDEITE SGTATPQRSGSVSNYR R S I Q R S 2 1 0 2 0 1 2 1 0 2 0 1 0 0 1 2 3 0 0 0 0 0 18 1 1917.928 Q13131 Q13131 476 493 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 2 0.00089683 95.554 By MS/MS By MS/MS 1 1 24599000 12459000 12140000 5449 2044 6198 13663;13664 13229;13230 13230 4011;7548;7549 2 SIDDSEMESPVDDVFYPGTGR TSTTKRPKSIDDSEME VFYPGTGRSPAAGSSQ K S I G R S 0 1 0 4 0 0 2 2 0 1 0 0 1 1 2 3 1 0 1 2 0 0 21 0 2314.99 C9JWJ8;K7EN08;Q14938 C9JWJ8 283 303 NFIX Nuclear factor 1;Nuclear factor 1 X-type yes no 2 0.00071042 73.022 By MS/MS By MS/MS 1 1 12822000 7686000 5135800 5450 698 6199 13665;13666 13231;13232 13231 270 1293;1294 2 SIDTQTPGGADRGSNNSSR VQRSSSTRSIDTQTPG RGSNNSSRSQSVSPTS R S I S R S 1 2 2 2 0 1 0 3 0 1 0 0 0 0 1 4 2 0 0 0 0 0 19 1 1918.8729 Q6P1L5 Q6P1L5 391 409 FAM117B Protein FAM117B yes yes 2 0.0074472 55.589 By MS/MS 1 11761000 0 11761000 5451 2315 6200 13667 13233 13233 4669;4670 1 SIEDDEEGHLICQSGDVLR SHRRKRSRSIEDDEEG CQSGDVLRARYEIVDT R S I L R A 0 1 0 3 1 1 3 2 1 2 2 0 0 0 0 2 0 0 0 1 0 0 19 0 2170.9801 B7ZL31;A0A087WX74;Q9HAZ1 B7ZL31 138 156 CLK4 Dual specificity protein kinase CLK4 yes no 3 0.0059226 58.107 By MS/MS By MS/MS 1 1 8032500 4851300 3181200 5452 102 6201 13668;13669 13234;13235 13234 182 2 SIEDLHR DKSKPWSRSIEDLHRG RSIEDLHRGSNLPSPV R S I H R G 0 1 0 1 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 7 0 868.44028 Q96PY5 Q96PY5 171 177 FMNL2 Formin-like protein 2 yes yes 2 0.027569 77.732 By matching By MS/MS 1 1 18963000 10904000 8059000 5453 2698 6202 13670;13671 13236 13236 5568 1 SIEDMTEEAFQK AFLITMEKSIEDMTEE MTEEAFQKHIQALAIR K S I Q K H 1 0 0 1 0 1 3 0 0 1 0 1 1 1 0 1 1 0 0 0 0 0 12 0 1426.6286 P14735 P14735 873 884 IDE Insulin-degrading enzyme yes yes 2 0.023315 57.164 By MS/MS By matching 1 1 12904000 6685500 6218500 5454 1702 6203 13672;13673 13237 13237 637 0 SIEVENDFLPVEK KPIKLRPRSIEVENDF NDFLPVEKTIGKKLPA R S I E K T 0 0 1 1 0 0 3 0 0 1 1 1 0 1 1 1 0 0 0 2 0 0 13 0 1517.7613 Q5JPT1;Q5VSN0;Q5JPT2;Q96B97 Q5JPT1 177 189 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes no 2 5.467E-20 170.26 By MS/MS By MS/MS 2 2 95190000 48040000 47150000 5455 2217 6204;6205 13674;13675;13676;13677 13238;13239;13240 13238 110 4431 3 SIFSGIGSTAEPVSQSTTSDYQWDVSR WGRSWSDRSIFSGIGS DYQWDVSRNQPYIDDE R S I S R N 1 1 0 2 0 2 1 2 0 2 0 0 0 1 1 7 3 1 1 2 0 0 27 0 2904.3414 Q86UE4;H0YBJ8 Q86UE4 344 370 MTDH Protein LYRIC yes no 3 0.005109 50.857 By MS/MS 1 7514100 0 7514100 5456 2401 6206 13678 13241 13241 4899 1 SIGASPNPFSVHTATAVPSGK VMILKKKRSIGASPNP ATAVPSGKIASPVSRK R S I G K I 3 0 1 0 0 0 0 2 1 1 0 1 0 1 3 4 2 0 0 2 0 0 21 0 2024.0327 A0A087WU64;A6NMQ1;P09884 A0A087WU64 186 206 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit yes no 2;3 1.1835E-05 98.015 By MS/MS By MS/MS 2 2 230560000 124680000 105880000 5457 51 6207 13679;13680;13681;13682 13242;13243;13244;13245;13246 13244 92 5 SIGSAVDQGNESIVAK PGPVKKTRSIGSAVDQ GNESIVAKTTVTVPND R S I A K T 2 0 1 1 0 1 1 2 0 2 0 1 0 0 0 3 0 0 0 2 0 0 16 0 1573.7948 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 203 218 RACGAP1 Rac GTPase-activating protein 1 yes no 2 4.1107E-07 132.15 By MS/MS By MS/MS 2 2 117210000 58789000 58424000 5458 2803 6208;6209 13683;13684;13685;13686 13247;13248;13249;13250 13249 5863;5864 4 SILAKPSSSPDPR LTSVMVPKSILAKPSS PSSSPDPRYLSVPPSP K S I P R Y 1 1 0 1 0 0 0 0 0 1 1 1 0 0 3 4 0 0 0 0 0 0 13 1 1353.7252 Q9BTC0 Q9BTC0 1011 1023 DIDO1 Death-inducer obliterator 1 yes yes 2;3 0.013149 75.02 By MS/MS By MS/MS 2 2 31949000 16950000 15000000 5459 2747 6210 13687;13688;13689;13690 13251;13252;13253 13252 5710 3 SILPYPVSPK GRTKSSYKSILPYPVS LPYPVSPKQKYSHVIL K S I P K Q 0 0 0 0 0 0 0 0 0 1 1 1 0 0 3 2 0 0 1 1 0 0 10 0 1099.6277 Q8IWI9;H3BP52;H3BTF4 Q8IWI9 917 926 MGA MAX gene-associated protein yes no 2 0.00023155 140.45 By MS/MS By MS/MS 1 1 35706000 20841000 14866000 5460 2429 6211 13691;13692 13254;13255;13256;13257;13258;13259 13258 4966 6 SILSPGGSCGPIK VMVTDADRSILSPGGS GGSCGPIKVKTEPTED R S I I K V 0 0 0 0 1 0 0 3 0 2 1 1 0 0 2 3 0 0 0 0 0 0 13 0 1271.6544 P78347 P78347 207 219 GTF2I General transcription factor II-I yes yes 2 0.0016056 89.747 By MS/MS By MS/MS 1 1 355900000 188950000 166950000 5461 1962 6212 13693;13694 13260;13261 13261 3746 2 SILVSPTGPSR AEFKKTDKSILVSPTG VSPTGPSRVAFDPEQK K S I S R V 0 1 0 0 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1112.619 Q14684 Q14684 702 712 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.0021223 91.093 By MS/MS By MS/MS 1 1 243720000 122530000 121180000 5462 2102 6213 13695;13696 13262;13263 13263 4157 2 SINEENGEVSEDQSQNK MEDANSEKSINEENGE SEDQSQNKHSRHKKKK K S I N K H 0 0 3 1 0 2 4 1 0 1 0 1 0 0 0 3 0 0 0 1 0 0 17 0 1905.8188 Q13523 Q13523 23 39 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 2 0.0074567 70.802 By MS/MS By MS/MS 1 1 11687000 7081000 4605900 5463 2061 6214 13697;13698 13264;13265 13264 4067 2 SINKLDSPDPFK CPLPPGKRSINKLDSP LDSPDPFKLNDPFQPF R S I F K L 0 0 1 2 0 0 0 0 0 1 1 2 0 1 2 2 0 0 0 0 0 0 12 1 1359.7034 B1AUU8;P42566 B1AUU8 656 667 EPS15 Epidermal growth factor receptor substrate 15 yes no 2 1.3809E-09 142.57 By MS/MS By MS/MS 1 1 30398000 17643000 12755000 5464 533 6215 13699;13700 13266;13267 13266 1005 2 SIPLECPLSSPK ALTGGEAKSIPLECPL ECPLSSPKGVLFSSKS K S I P K G 0 0 0 0 1 0 1 0 0 1 2 1 0 0 3 3 0 0 0 0 0 0 12 0 1326.6853 Q92667;I3L2A2;I3L2N7 Q92667 142 153 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 3.0318E-09 136.01 By MS/MS By MS/MS 1 1 300840000 161440000 139400000 5465 2594 6216 13701;13702 13268;13269 13268 5330 2 SIQDLTVTGTEPGQVSSR GNGQPRRRSIQDLTVT EPGQVSSRSSSPSVRM R S I S R S 0 1 0 1 0 2 1 2 0 1 1 0 0 0 1 3 3 0 0 2 0 0 18 0 1873.9381 Q9UG54;O43318 Q9UG54 93 110 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 2 2.1748E-92 216.17 By MS/MS By MS/MS 1 1 179070000 90197000 88873000 5466 1494 6217 13703;13704 13270;13271 13271 2790 2 SIQEIQELDKDDESLR NYKPPAQKSIQEIQEL DKDDESLRKYKEALLG K S I L R K 0 1 0 3 0 2 3 0 0 2 2 1 0 0 0 2 0 0 0 0 0 0 16 1 1916.9327 J3KRE2;J3KTF8;J3QQX2;P52565;J3KS60;J3KRY1 J3KRE2 34 49 ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 3 0.023096 50.232 By MS/MS 1 5470900 0 5470900 5467 1333 6218 13705 13272 13272 2469 1 SIQFVDWCPTGFK IATIKTKRSIQFVDWC DWCPTGFKVGINYQPP R S I F K V 0 0 0 1 1 1 0 1 0 1 0 1 0 2 1 1 1 1 0 1 0 0 13 0 1583.7442 P68363;P68366 P68363 340 352 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain yes no 2 3.1713E-29 142.19 By MS/MS By MS/MS 2 2 47727000 24224000 23503000 5468 1957 6219;6220 13706;13707;13708;13709 13273;13274;13275 13275 3741 2 SIQKNMVYTCHR GCKGFFRRSIQKNMVY NMVYTCHRDKNCIINK R S I H R D 0 1 1 0 1 1 0 0 1 1 0 1 1 0 0 1 1 0 1 1 0 0 12 1 1535.7337 A8MUP8;P13631;P10276 A8MUP8 131 142 RARA;RARG Retinoic acid receptor gamma;Retinoic acid receptor alpha yes no 2 0.02671 60.398 By MS/MS 1 0 0 0 5469 498 6221 13710 13276 13276 196 912;6966 1 SIRDTPAKNAQK EEKAPVKKSIRDTPAK TPAKNAQKSNQNGKDS K S I Q K S 2 1 1 1 0 1 0 0 0 1 0 2 0 0 1 1 1 0 0 0 0 0 12 2 1327.7208 P06748 P06748 195 206 NPM1 Nucleophosmin yes yes 3 0.016029 68.173 By matching By MS/MS 1 1 23987000 4397000 19590000 5470 1647 6222 13711;13712 13277 13277 1 SISADDDLQESSR PTFQPFQRSISADDDL DDLQESSRRPQRKSLY R S I S R R 1 1 0 3 0 1 1 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0 13 0 1421.627 P18615;A0A0A0MT02;A0A0G2JI50;E9PD43;A0A0A0MSN9;A2ABK4 P18615 113 125 NELFE Negative elongation factor E yes no 2 1.3569E-19 167.22 By MS/MS By MS/MS 1 1 269860000 126310000 143550000 5471 1726 6223 13713;13714 13278;13279 13279 3250 2 SISADSFDQR KGKGKRERSISADSFD SADSFDQRDPGTPNDD R S I Q R D 1 1 0 2 0 1 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 10 0 1124.5098 O00512 O00512 102 111 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 0.0018884 107.34 By MS/MS By MS/MS 1 2 46644000 21741000 24903000 5472 1441 6224;6225 13715;13716;13717 13280;13281;13282 13280 2644;2645 3 SISASKASPPGDLQNPK TQSLHSLRSISASKAS PGDLQNPKRARQDPT_ R S I P K R 2 0 1 1 0 1 0 1 0 1 1 2 0 0 3 4 0 0 0 0 0 0 17 1 1695.8792 O00273 O00273 308 324 DFFA DNA fragmentation factor subunit alpha yes yes 2;3 3.144E-63 191.4 By MS/MS By MS/MS 2 2 117960000 60265000 57693000 5473 1432 6226 13718;13719;13720;13721 13283;13284;13285;13286;13287;13288;13289 13289 2631;2632 7 SISCEEATCSDTSESILEEEPQENQKK DDRRGVLRSISCEEAT EPQENQKKLLPLSVTP R S I K K L 1 0 1 1 2 2 7 0 0 2 1 2 0 0 1 5 2 0 0 0 0 0 27 1 3127.3445 I3L280;O94763 I3L280 187 213 URI1 Unconventional prefoldin RPB5 interactor 1 yes no 3 0.0083127 49.593 By MS/MS By MS/MS 1 1 37374000 18417000 18956000 5474 1309 6227 13722;13723 13290;13291 13291 2434 2 SISKDSLASNIVNLTPQNQPHPTATK GDSISLARSISKDSLA QPHPTATKSHGKSLLS R S I T K S 2 0 3 1 0 2 0 0 1 2 2 2 0 0 3 4 3 0 0 1 0 0 26 1 2760.4406 Q5T5Y3 Q5T5Y3 498 523 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 3 0.00024988 72.469 By matching By MS/MS 1 1 30794000 15212000 15581000 5475 2243 6228 13724;13725 13292 13292 4497 1 SISLEPLQK KELAHFAKSISLEPLQ ISLEPLQKELIPQQRH K S I Q K E 0 0 0 0 0 1 1 0 0 1 2 1 0 0 1 2 0 0 0 0 0 0 9 0 1013.5757 Q8N0T1 Q8N0T1 67 75 C8orf59 Uncharacterized protein C8orf59 yes yes 2 0.0073762 82.417 By MS/MS 1 1589100 1589100 0 5476 2451 6229 13726 13293 13293 5007 1 SISLGDSEGPIVATLAQPLR SSRARISRSISLGDSE ATLAQPLRRPSSVGEL R S I L R R 2 1 0 1 0 1 1 2 0 2 3 0 0 0 2 3 1 0 0 1 0 0 20 0 2023.095 O43379 O43379 1226 1245 WDR62 WD repeat-containing protein 62 yes yes 2 1.3318E-10 139.78 By MS/MS By MS/MS 1 1 33867000 18441000 15426000 5477 1497 6230 13727;13728 13294;13295 13294 2793 2 SISLSQSAENVPASK GFEFFRNRSISLSQSA AENVPASKFSLQKTLS R S I S K F 2 0 1 0 0 1 1 0 0 1 1 1 0 0 1 5 0 0 0 1 0 0 15 0 1516.7733 H0YFN7;Q4ADV7 H0YFN7 907 921 RIC1 RAB6A-GEF complex partner protein 1 yes no 2 4.3387E-07 130.47 By MS/MS By MS/MS 1 1 27014000 14694000 12320000 5478 1179 6231 13729;13730 13296;13297 13296 2221 1 SISLYYTGEK QGTEIDGRSISLYYTG SLYYTGEKGQNQDYRG R S I E K G 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P19338;H7BY16 P19338 458 467 NCL Nucleolin yes no 2 0.0070895 87.308 By MS/MS By MS/MS 1 2 18254000 9328800 8925000 5479 1732 6232 13731;13732;13733 13298;13299 13298 2 SISNEGLTLNNSHVSK TPNRGITRSISNEGLT LNNSHVSKHIRKNLSF R S I S K H 0 0 3 0 0 0 1 1 1 1 2 1 0 0 0 4 1 0 0 1 0 0 16 0 1698.8537 Q08AD1 Q08AD1 462 477 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2;3 3.178E-162 247.44 By MS/MS By MS/MS 2 2 158320000 102050000 56267000 5480 2017 6233 13734;13735;13736;13737 13300;13301;13302;13303 13301 3895 4 SISNPPGSNLR FNISNLQKSISNPPGS NPPGSNLRTT______ K S I L R T 0 1 2 0 0 0 0 1 0 1 1 0 0 0 2 3 0 0 0 0 0 0 11 0 1140.5887 F5GWT4;Q9H4A3 F5GWT4 2122 2132 WNK1 Serine/threonine-protein kinase WNK1 yes no 2 0.023893 62.298 By MS/MS 1 10204000 10204000 0 5481 941 6234 13738 13304 13304 1767 1 SISPEVSASR ITEVAAVKSISPEVSA SPEVSASRRKLDFNSP K S I S R R 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 4 0 0 0 1 0 0 10 0 1031.5247 Q9Y2F5 Q9Y2F5 923 932 ICE1 Little elongation complex subunit 1 yes yes 2 0.030556 59.153 By matching By MS/MS 1 1 10758000 6170300 4587800 5482 3089 6235 13739;13740 13305 13305 1 SISPSALQDLLR MPSVQPPRSISPSALQ SALQDLLRTLKSPSSP R S I L R T 1 1 0 1 0 1 0 0 0 1 3 0 0 0 1 3 0 0 0 0 0 0 12 0 1298.7194 Q92793 Q92793 2061 2072 CREBBP CREB-binding protein yes yes 2 2.6463E-11 151.16 By MS/MS By MS/MS 1 1 28343000 14723000 13620000 5483 2601 6236 13741;13742 13306;13307 13307 5341 2 SISSPSVSSETMDKPVDLSTR EEPDSITKSISSPSVS KPVDLSTRKEIDTDST K S I T R K 0 1 0 2 0 0 1 0 0 1 1 1 1 0 2 7 2 0 0 2 0 0 21 1 2222.0736 P49792 P49792 2802 2822 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 3 8.0217E-05 92.426 By MS/MS By MS/MS 3 4 88958000 42984000 45974000 5484 1860 6237;6238 13743;13744;13745;13746;13747;13748;13749 13308;13309;13310;13311;13312;13313;13314;13315 13315 723 3609;3610 8 SISTSGPLDKEDTGR CPIFPMARSISTSGPL LDKEDTGRQKLISTGS R S I G R Q 0 1 0 2 0 0 1 2 0 1 1 1 0 0 1 3 2 0 0 0 0 0 15 1 1561.7584 A0A0U1RR27;Q7Z401 A0A0U1RR27 1631 1645 DENND4A C-myc promoter-binding protein yes no 3 0.0047102 68.262 By MS/MS By MS/MS 1 1 9034700 3905800 5128900 5485 393 6239 13750;13751 13316;13317 13317 722 2 SITSTPLSGK LSDVSSPRSITSTPLS TSTPLSGKESVFFAEP R S I G K E 0 0 0 0 0 0 0 1 0 1 1 1 0 0 1 3 2 0 0 0 0 0 10 0 989.53933 Q9P0K7 Q9P0K7 293 302 RAI14 Ankycorbin yes yes 2 0.004616 86.262 By matching By MS/MS 1 1 14056000 5965100 8091000 5486 2964 6240 13752;13753 13318 13318 6242;6243;7891 0 SIVECQPDASATPGVGTADSPAAPTDSR RKTSDPRRSIVECQPD PAAPTDSRDDQKGLSL R S I S R D 5 1 0 3 1 1 1 2 0 1 0 0 0 0 4 4 3 0 0 2 0 0 28 0 2756.2559 Q7Z2Z1 Q7Z2Z1 1394 1421 TICRR Treslin yes yes 3 7.8562E-07 82.831 By MS/MS By MS/MS 1 1 21746000 12166000 9580000 5487 2373 6241 13754;13755 13319;13320 13319 4812;7686 2 SIVEEEEDDDYVELK EMPEFLDKSIVEEEED DDDYVELKVEGSPTEE K S I L K V 0 0 0 3 0 0 5 0 0 1 1 1 0 0 0 1 0 0 1 2 0 0 15 0 1810.7996 E9PEM5;P50851 E9PEM5 1100 1114 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes no 2 8.2114E-22 162.49 By MS/MS By MS/MS 2 2 7925000 3598400 4326600 5488 858 6242 13756;13757;13758;13759 13321;13322;13323;13324 13321 8123 4 SIVPSSPQPQR SSLCRSRRSIVPSSPQ PSSPQPQRAQLAPHAP R S I Q R A 0 1 0 0 0 2 0 0 0 1 0 0 0 0 3 3 0 0 0 1 0 0 11 0 1194.6357 H0Y860;Q9P246;H7C5A5;H7C5C6;H7C5K2 H0Y860 526 536 STIM2 Stromal interaction molecule 2 yes no 2 0.015446 68.676 By MS/MS By MS/MS 1 1 18669000 9733300 8935600 5489 1144 6243 13760;13761 13325;13326 13325 2174 2 SIYDDISSPGLGSTPLTSR KSGAPPVRSIYDDISS GSTPLTSRRQPNISVM R S I S R R 0 1 0 2 0 0 0 2 0 2 2 0 0 0 2 5 2 0 1 0 0 0 19 0 1964.9691 Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5 93 111 NUP35 Nucleoporin NUP53 yes no 2 7.6056E-07 131.45 By MS/MS By MS/MS 2 2 22428000 11181000 11247000 5490 2518 6244;6245 13762;13763;13764;13765 13327;13328;13329 13329 5143;5144;5145 3 SIYGEKFEDENFILK RHNGTGGKSIYGEKFE EDENFILKHTGPGILS K S I L K H 0 0 1 1 0 0 3 1 0 2 1 2 0 2 0 1 0 0 1 0 0 0 15 1 1830.904 P62937;F8WE65;C9J5S7 P62937 77 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 3 0.0053145 100.18 By matching By MS/MS 1 1 30097000 17176000 12921000 5491 1950 6246 13766;13767 13330 13330 1 SIYYITGESK SRMKETQKSIYYITGE YYITGESKEQVANSAF K S I S K E 0 0 0 0 0 0 1 1 0 2 0 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P08238;Q58FF8 P08238 482 491 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 0.0048545 105.4 By matching By MS/MS 1 1 19044000 11310000 7733500 5492 1658 6247 13768;13769 13331 13331 1 SKDEEEDEESDDADDTPILKPVSLLR CQSSSKRKSKDEEEDE LKPVSLLRKRDVKNSP K S K L R K 1 1 0 6 0 0 5 0 0 1 3 2 0 0 2 3 1 0 0 1 0 0 26 2 2944.3673 Q92794;C9K0F9 Q92794 1104 1129 KAT6A Histone acetyltransferase KAT6A;Histone acetyltransferase yes no 3;4 0.003679 58.361 By MS/MS By MS/MS 2 2 86618000 38237000 48381000 5493 2602 6248 13770;13771;13772;13773 13332;13333;13334 13332 5343 3 SKDHFGLEGDEESTMLEDSVSPK DIILKKKKSKDHFGLE LEDSVSPKKSTVLQQQ K S K P K K 0 0 0 3 0 0 4 2 1 0 2 2 1 1 1 4 1 0 0 1 0 0 23 1 2536.1275 Q9Y490 Q9Y490 405 427 TLN1 Talin-1 yes yes 3 8.622E-05 87.025 By MS/MS By MS/MS 1 1 35002000 17758000 17245000 5494 3117 6249 13774;13775 13335;13336;13337;13338 13337 1241 6679 4 SKEGHSLEMENENLVENGADSDEDDNSFLK SKGETGKRSKEGHSLE EDDNSFLKQQSPQEPK R S K L K Q 1 0 4 4 0 0 6 2 1 0 3 2 1 1 0 4 0 0 0 1 0 0 30 1 3351.4321 Q9UHB6;F8VS07;F8VQE1 Q9UHB6 666 695 LIMA1 LIM domain and actin-binding protein 1 yes no 3 4.6507E-10 113.41 By MS/MS By MS/MS 2 2 54768000 18867000 35901000 5495 3003 6250 13776;13777;13778;13779 13339;13340 13339 1193 6319 2 SKESVPEFPLSPPK FELILSPRSKESVPEF EFPLSPPKKKDLSLEE R S K P K K 0 0 0 0 0 0 2 0 0 0 1 2 0 1 4 3 0 0 0 1 0 0 14 1 1540.8137 A2A2D0;P16949 A2A2D0 28 41 STMN1 Stathmin yes no 2;3 5.5605E-21 155.66 By MS/MS By MS/MS 2 2 230380000 122750000 107630000 5496 447 6251 13780;13781;13782;13783 13341;13342;13343;13344;13345;13346;13347;13348;13349;13350 13349 837 10 SKETSSPGTDDVFTPAPSDSPSSQR DDGGIMMRSKETSSPG SDSPSSQRIQRCLSDP R S K Q R I 1 1 0 3 0 1 1 1 0 0 0 1 0 1 4 7 3 0 0 1 0 0 25 1 2579.1623 P19634 P19634 766 790 SLC9A1 Sodium/hydrogen exchanger 1 yes yes 3 2.1193E-06 105.71 By MS/MS By MS/MS 1 1 24583000 14833000 9750600 5497 1733 6252 13784;13785 13351;13352;13353 13351 3266;3267 3 SKFDSDEEEEDTENVEAASSGK DGPRLPQRSKFDSDEE VEAASSGKVTRSPSPV R S K G K V 2 0 1 3 0 0 6 1 0 0 0 2 0 1 0 4 1 0 0 1 0 0 22 1 2401.9881 Q8TF01 Q8TF01 286 307 PNISR Arginine/serine-rich protein PNISR yes yes 2;3 7.0353E-07 127.3 By MS/MS By MS/MS 2 1 97438000 77183000 20256000 5498 2548 6253 13786;13787;13788 13354;13355;13356;13357 13356 5206 4 SKHDSSAPDPAPDSADEVMPEAVPEVASEPGLESASHPNVDR SVKKEDLKSKHDSSAP ASHPNVDRTYFPGPPG K S K D R T 6 1 1 5 0 0 5 1 2 0 1 1 1 0 7 7 0 0 0 4 0 0 42 1 4322.951 Q9BTC0 Q9BTC0 885 926 DIDO1 Death-inducer obliterator 1 yes yes 4 0.0020971 46.174 By MS/MS 1 20848000 20848000 0 5499 2747 6254 13789 13358 13358 1093 5711 1 SKHEEEEWTDDDLVESL DDDYVSKKSKHEEEEW DDDLVESL________ K S K S L - 0 0 0 3 0 0 5 0 1 0 2 1 0 0 0 2 1 1 0 1 0 0 17 1 2059.8858 D6RHI7;P51946 D6RHI7 233 249 CCNH Cyclin-H yes no 3 0.0033871 71.344 By MS/MS 1 15457000 0 15457000 5500 766 6255 13790 13359 13359 7056 1 SKLNLAQFLNEDLS AKTAALEKSKLNLAQF QFLNEDLS________ K S K L S - 1 0 2 1 0 1 1 0 0 0 4 1 0 1 0 2 0 0 0 0 0 0 14 1 1590.8253 Q9BPX3 Q9BPX3 1002 1015 NCAPG Condensin complex subunit 3 yes yes 2 0.0016072 100.18 By MS/MS By matching 1 1 8161100 3982300 4178900 5501 2739 6256 13791;13792 13360 13360 5683 1 SKPDPEVGPLLGVQPLPGSPTADR HNEDLAKRSKPDPEVG PGSPTADRQSSSGGGP R S K D R Q 1 1 0 2 0 1 1 3 0 0 3 1 0 0 6 2 1 0 0 2 0 0 24 1 2426.2805 Q9H5J0 Q9H5J0 531 554 ZBTB3 Zinc finger and BTB domain-containing protein 3 yes yes 3 2.8171E-05 81.329 By MS/MS By matching 1 1 23200000 12906000 10293000 5502 2839 6257 13793;13794 13361;13362 13361 5968 2 SKPGAAMVEMADGYAVDR VEKVKFMKSKPGAAMV ADGYAVDRAITHLNNN K S K D R A 4 1 0 2 0 0 1 2 0 0 0 1 2 0 1 1 0 0 1 2 0 0 18 1 1866.8604 M0QXS5;P14866;M0QYT0 M0QXS5 358 375 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3 0.002279 69.081 By MS/MS 1 4601900 4601900 0 5503 1403 6258 13795 13363 13363 1 SKPIPIMPASPQK EELLAEEKSKPIPIMP IMPASPQKGHAVNLLD K S K Q K G 1 0 0 0 0 1 0 0 0 2 0 2 1 0 4 2 0 0 0 0 0 0 13 1 1392.7799 G8JLD5;O00429 G8JLD5 583 595 DNM1L Dynamin-1-like protein yes no 2 0.0061793 81.651 By MS/MS By MS/MS 2 2 33961000 18747000 15215000 5504 1108 6259;6260 13796;13797;13798;13799 13364;13365;13366;13367 13364 398 2089 4 SKPIPIMPASPQKGHAVNLLDVPVPVAR EELLAEEKSKPIPIMP DVPVPVARKLSAREQR K S K A R K 3 1 1 1 0 1 0 1 1 2 2 2 1 0 6 2 0 0 0 4 0 0 28 2 2930.6528 G8JLD5;O00429 G8JLD5 583 610 DNM1L Dynamin-1-like protein yes no 4 0.00050886 60.33 By MS/MS By MS/MS 2 2 87691000 47218000 40473000 5505 1108 6261;6262 13800;13801;13802;13803 13368;13369;13370;13371 13370 398 2089 4 SKQPLYSSIVTVEASKPNGQR KKDKKNKKSKQPLYSS ASKPNGQRYDSVNEKL K S K Q R Y 1 1 1 0 0 2 1 1 0 1 1 2 0 0 2 4 1 0 1 2 0 0 21 2 2288.2125 A0A087X2C4;H0YAH0;O60245 A0A087X2C4 258 278 PCDH7 Protocadherin-7 yes no 3 0.0023525 73.76 By MS/MS By matching 1 1 9250700 5378600 3872100 5506 174 6263 13804;13805 13372 13372 285 1 SKSDSYTLDPDTLR KLDPPRERSKSDSYTL TLDPDTLRKKKMPLTE R S K L R K 0 1 0 3 0 0 0 0 0 0 2 1 0 0 1 3 2 0 1 0 0 0 14 1 1596.7631 O75592 O75592 2831 2844 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2;3 0.0020951 83.891 By MS/MS By MS/MS 2 1 34721000 18930000 15791000 5507 1550 6264 13806;13807;13808 13373;13374;13375 13374 2935;2936 3 SKSEDMDNVQSK NEFSRRKRSKSEDMDN DMDNVQSKRRRYMEEE R S K S K R 0 0 1 2 0 1 1 0 0 0 0 2 1 0 0 3 0 0 0 1 0 0 12 1 1366.6035 Q6VMQ6 Q6VMQ6 557 568 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 2 0.00071581 113.65 By MS/MS By MS/MS 1 1 5871600 3083000 2788700 5508 2341 6265 13809;13810 13376;13377 13377 4732;4733 1 SKSEEAHAEDSVMDHHFR KKGFVLHKSKSEEAHA SVMDHHFRKPANDITS K S K F R K 2 1 0 2 0 0 3 0 3 0 0 1 1 1 0 3 0 0 0 1 0 0 18 1 2110.9127 Q8NC51 Q8NC51 328 345 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3;4;5 6.6509E-07 130.52 By MS/MS By MS/MS 5 5 2917300000 1371500000 1545800000 5509 2498 6266;6267 13811;13812;13813;13814;13815;13816;13817;13818;13819;13820 13378;13379;13380;13381;13382;13383;13384;13385;13386 13385 1009 5099 9 SKSLKQNINLSAPIMSR PISGHYDRSKSLKQNI LSAPIMSRFDLFFILV R S K S R F 1 1 2 0 0 1 0 0 0 2 2 2 1 0 1 4 0 0 0 0 0 0 17 2 1886.0408 Q14566 Q14566 513 529 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.031736 46.873 By MS/MS 1 0 0 0 5510 2091 6268 13821 13387 13387 833 1 SKSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK REEAYHSRSKSPLPPE DLHFQVSKDRYGGQPL R S K S K D 1 0 1 4 0 2 6 0 1 0 4 3 0 1 3 4 3 0 1 2 0 0 36 2 4117.9492 H3BQZ7;Q1KMD3 H3BQZ7 226 261 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 4 1.0376E-33 151.02 By MS/MS By MS/MS 1 1 457800000 234220000 223580000 5511 1244 6269 13822;13823 13388;13389 13388 2321 2 SKSPPKSPEEEGAVSS RESKSRSRSKSPPKSP EEEGAVSS________ R S K S S - 1 0 0 0 0 0 3 1 0 0 0 2 0 0 3 5 0 0 0 1 0 0 16 2 1614.7737 Q01130 Q01130 206 221 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 2 0.0003059 120.99 By MS/MS By MS/MS 2 2 163890000 79036000 84852000 5512 1978 6270;6271 13824;13825;13826;13827 13390;13391;13392 13390 3789;3790;3791 3 SKSPPKVPIVIQDDSLPAGPPPQIR ITQKESRKSKSPPKVP AGPPPQIRILKRPTSN K S K I R I 1 1 0 2 0 2 0 1 0 3 1 2 0 0 7 3 0 0 0 2 0 0 25 2 2635.4697 Q7Z422 Q7Z422 37 61 SZRD1 SUZ domain-containing protein 1 yes yes 3 3.5097E-14 137.72 By matching By MS/MS 1 1 31186000 18039000 13147000 5513 2381 6272 13828;13829 13393;13394 13393 4837 2 SKSPSPPRLTEDR SSQGLKEKSKSPSPPR PPRLTEDRKKASLVAL K S K D R K 0 2 0 1 0 0 1 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 13 2 1468.7634 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 326 338 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.023554 59.513 By MS/MS By matching 1 1 25309000 16324000 8984700 5514 810 6273 13830;13831 13395 13395 1457 1 SKSVIEQVSWDT TRQLRNIRSKSVIEQV IEQVSWDT________ R S K D T - 0 0 0 1 0 1 1 0 0 1 0 1 0 0 0 3 1 1 0 2 0 0 12 1 1377.6776 Q6WCQ1;H0Y7E2 Q6WCQ1 1014 1025 MPRIP Myosin phosphatase Rho-interacting protein yes no 2 0.0029965 90.444 By MS/MS By MS/MS 1 1 11685000 6696100 4988500 5515 2345 6274 13832;13833 13396;13397 13397 4750 2 SKSVKEDSNLTLQEK KTPDKMKKSKSVKEDS SNLTLQEKKEKIQTGL K S K E K K 0 0 1 1 0 1 2 0 0 0 2 3 0 0 0 3 1 0 0 1 0 0 15 2 1704.8894 H0YLE8;P46940 H0YLE8 869 883 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 3 0.020634 65.038 By MS/MS 1 11230000 0 11230000 5516 1210 6275 13834 13398 13398 2252 1 SKSYDEGLDDYREDAK QPNSKTERSKSYDEGL DDYREDAKLSFKHVSS R S K A K L 1 1 0 4 0 0 2 1 0 0 1 2 0 0 0 2 0 0 2 0 0 0 16 2 1889.8279 Q5T5U3;E7ESW5;F8W9U9;A0A1B0GV73 Q5T5U3 878 893 ARHGAP21 Rho GTPase-activating protein 21 yes no 3 0.019797 64.374 By MS/MS 1 9342200 0 9342200 5517 2241 6276 13835 13399 13399 4494 1 SKTFDWAEFRPIQQALAQER RERRREGRSKTFDWAE QQALAQERVGGVGPAD R S K E R V 3 2 0 1 0 3 2 0 0 1 1 1 0 2 1 1 1 1 0 0 0 0 20 2 2420.2237 Q6WCQ1;J3KSW8;H0Y2S9 Q6WCQ1 540 559 MPRIP Myosin phosphatase Rho-interacting protein yes no 3 0.0083889 64.488 By MS/MS 1 11150000 0 11150000 5518 2345 6277 13836 13400 13400 7674 1 SKTPVQAAAVSIVEKPVTR KKPNKSKRSKTPVQAA IVEKPVTRKSERIDRE R S K T R K 3 1 0 0 0 1 1 0 0 1 0 2 0 0 2 2 2 0 0 4 0 0 19 2 1980.1368 Q96T58 Q96T58 1824 1842 SPEN Msx2-interacting protein yes yes 3 0.028346 56.681 By MS/MS By matching 1 1 11212000 7465000 3747100 5519 2716 6278 13837;13838 13401 13401 1 SKVGSTENIK APDLKNVRSKVGSTEN VGSTENIKHQPGGGRA R S K I K H 0 0 1 0 0 0 1 1 0 1 0 2 0 0 0 2 1 0 0 1 0 0 10 1 1061.5717 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4 E7EVA0 2082 2091 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.0023821 77.74 By matching By MS/MS 1 1 45947000 27674000 18273000 5520 828 6279 13839;13840 13402 13402 1539;7097 0 SLAADDEGGPELEPDYGTATR YGLEDDTRSLAADDEG PDYGTATRRRPECGRG R S L T R R 3 1 0 3 0 0 3 3 0 0 2 0 0 0 2 1 2 0 1 0 0 0 21 0 2162.9604 C9JJX6;E9PDC3;O00192 C9JJX6 204 224 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 2 0.015407 61.649 By MS/MS By MS/MS 1 1 12766000 8215400 4550700 5521 670 6280 13841;13842 13403;13404 13404 8092 2 SLAALDALNTDDENDEEEYEAWK KELEENKRSLAALDAL EEEYEAWKVRELKRIK R S L W K V 4 0 2 4 0 0 5 0 0 0 3 1 0 0 0 1 1 1 1 0 0 0 23 0 2640.1351 P55081 P55081 258 280 MFAP1 Microfibrillar-associated protein 1 yes yes 2;3 4.3939E-191 250.64 By MS/MS By MS/MS 2 2 766070000 261950000 504120000 5522 1909 6281 13843;13844;13845;13846 13405;13406;13407;13408 13407 7491 4 SLAALSQIAYQR GSGSHGRRSLAALSQI LSQIAYQRNDDDEEEA R S L Q R N 3 1 0 0 0 2 0 0 0 1 2 0 0 0 0 2 0 0 1 0 0 0 12 0 1319.7197 E9PGZ1;E7EX44 E9PGZ1 12 23 CALD1 yes no 2 0.00045515 112.02 By MS/MS By matching 1 1 5905500 2707700 3197800 5523 876 6282 13847;13848 13409 13409 1621 1 SLADELALVDVLEDK CAISILGKSLADELAL LVDVLEDKLKGEMMDL K S L D K L 2 0 0 3 0 0 2 0 0 0 4 1 0 0 0 1 0 0 0 2 0 0 15 0 1628.8509 P07195;A8MW50;C9J7H8;F5H793 P07195 44 58 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 2 5.0338E-67 208.08 By MS/MS By MS/MS 1 1 53494000 39729000 13765000 5524 1649 6283 13849;13850 13410;13411 13410 2 SLAFDSEHSADEK LLLNGCLKSLAFDSEH SEHSADEKEKPCAKSR K S L E K E 2 0 0 2 0 0 2 0 1 0 1 1 0 1 0 3 0 0 0 0 0 0 13 0 1434.6263 Q96L73 Q96L73 478 490 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes yes 2 0.014727 63.754 By MS/MS By matching 1 1 13652000 5656100 7996000 5525 2680 6284 13851;13852 13412 13412 5537;5538 1 SLALMYESEK ATAASTSRSLALMYES ALMYESEKVGVASSEE R S L E K V 1 0 0 0 0 0 2 0 0 0 2 1 1 0 0 2 0 0 1 0 0 0 10 0 1169.5638 O95721 O95721 63 72 SNAP29 Synaptosomal-associated protein 29 yes yes 2 0.0080817 77.677 By matching By MS/MS 1 1 6969400 2846000 4123400 5526 1608 6285 13853;13854 13413;13414 13414 3046 2 SLAQVEEPAIENVKPPGSPVAK SPKRKRPKSLAQVEEP PPGSPVAKLAKFTFKQ K S L A K L 3 0 1 0 0 1 3 1 0 1 1 2 0 0 4 2 0 0 0 3 0 0 22 1 2259.2111 Q9NXL9 Q9NXL9 898 919 MCM9 DNA helicase MCM9 yes yes 3 8.7334E-05 88.396 By MS/MS By MS/MS 1 1 43627000 26984000 16644000 5527 2943 6286 13855;13856 13415;13416;13417 13417 6199 3 SLASIEAK YTTHHILKSLASIEAK SLASIEAKCSDMSSEN K S L A K C 2 0 0 0 0 0 1 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 8 0 817.45453 E9PHV5;P28290;E7EUL7 E9PHV5 665 672 SSFA2 Sperm-specific antigen 2 yes no 1 2.2958E-08 118.33 By MS/MS 1 9326000 0 9326000 5528 880 6287 13857 13418 13418 1633 0 SLDEGASQDAPK KLVERKARSLDEGASQ GASQDAPKLKKRALSH R S L P K L 2 0 0 2 0 1 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 12 0 1216.5572 Q8N1G1 Q8N1G1 499 510 REXO1 RNA exonuclease 1 homolog yes yes 2 0.012489 71.268 By MS/MS 1 5366500 5366500 0 5529 2459 6288 13858 13419 13419 5032 1 SLDGAPIGVMDQSLMK TSSKRVSRSLDGAPIG VMDQSLMKDFPGAAGE R S L M K D 1 0 0 2 0 1 0 2 0 1 2 1 2 0 1 2 0 0 0 1 0 0 16 0 1660.8164 O43491;E9PK52;E9PHY5;H0Y5B0;E9PII3 O43491 550 565 EPB41L2 Band 4.1-like protein 2 yes no 2 0.01738 52.453 By matching By MS/MS 1 1 12195000 4686900 7508000 5530 1502 6289 13859;13860 13420 13420 539 2811 1 SLDGASVNENHEIYMK SKRYTMSRSLDGASVN ENHEIYMKDSMSAAEV R S L M K D 1 0 2 1 0 0 2 1 1 1 1 1 1 0 0 2 0 0 1 1 0 0 16 0 1805.8254 A8K968;A0A0A0MRA8;A0A0A0MSA4;A0A0J9YW26;A0A1B0GTF8;J3KT37 A8K968 334 349 EPB41L3 yes no 2 0.011825 58.781 By matching By MS/MS 2 2 28519000 16263000 12256000 5531 205 6290;6291 13861;13862;13863;13864 13421;13422 13421 87 8006 2 SLDGSGSEPAVCEMCGIVGTR LLSPGTPRSLDGSGSE MCGIVGTREAFFSKTK R S L T R E 1 1 0 1 2 0 2 4 0 1 1 0 1 0 1 3 1 0 0 2 0 0 21 0 2180.95 Q969R5;H7C228 Q969R5 79 99 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 yes no 2 0.0062745 56.719 By matching By MS/MS 1 1 11005000 6062500 4942800 5532 2615 6292 13865;13866 13423 13423 1050 5383;5384 1 SLDGVTNDR QPNIPKAKSLDGVTND LDGVTNDRTASQGQWG K S L D R T 0 1 1 2 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 9 0 975.46214 E9PRL8;E9PQ71;E9PIP9;E9PJ54;E9PM00;Q9UBM7 E9PRL8 14 22 DHCR7 7-dehydrocholesterol reductase yes no 2 0.010899 76.927 By MS/MS By matching 1 1 59709000 29327000 30382000 5533 884 6293 13867;13868 13424 13424 1640 1 SLDNNYSTPNER SNMGSNTKSLDNNYST NYSTPNERGDHNRTLD K S L E R G 0 1 3 1 0 0 1 0 0 0 1 0 0 0 1 2 1 0 1 0 0 0 12 0 1408.6219 C9JZR2;O60716;H0YC95 C9JZR2 899 910 CTNND1 Catenin delta-1 yes no 2 0.00071858 119.53 By MS/MS By MS/MS 2 3 238230000 128740000 109490000 5534 706 6294;6295 13869;13870;13871;13872;13873 13425;13426;13427;13428;13429;13430 13429 26 7044;8106 5 SLDSEPSVPSAAKPPSPEK VEYQKKGKSLDSEPSV AKPPSPEKTAPVASTP K S L E K T 2 0 0 1 0 0 2 0 0 0 1 2 0 0 5 5 0 0 0 1 0 0 19 1 1921.9633 Q7Z3K3 Q7Z3K3 410 428 POGZ Pogo transposable element with ZNF domain yes yes 3 0.014392 52.612 By MS/MS 1 16243000 16243000 0 5535 2377 6296 13874 13431 13431 4828 1 SLDVRQEELGAVVDK LGQELKPKSLDVRQEE ELGAVVDKEMAATSAA K S L D K E 1 1 0 2 0 1 2 1 0 0 2 1 0 0 0 1 0 0 0 3 0 0 15 1 1656.8683 O75146 O75146 771 785 HIP1R Huntingtin-interacting protein 1-related protein yes yes 2 0.0064106 81.128 By matching By MS/MS 1 1 71084000 28473000 42611000 5536 1536 6297 13875;13876 13432 13432 2899 1 SLDYLNLDK KGKRAHSKSLDYLNLD LDYLNLDKMIKEPADT K S L D K M 0 0 1 2 0 0 0 0 0 0 3 1 0 0 0 1 0 0 1 0 0 0 9 0 1079.5499 Q96GV9 Q96GV9 167 175 C5orf30 UNC119-binding protein C5orf30 yes yes 2 0.0042439 105.2 By MS/MS 1 3071200 3071200 0 5537 2655 6298 13877 13433 13433 5477 1 SLEDPYSQQIR PRTTIFVKSLEDPYSQ DPYSQQIRLQQQQAQQ K S L I R L 0 1 0 1 0 2 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 0 11 0 1334.6466 A0A087WXK3;Q9NVH2 A0A087WXK3 120 130 INTS7 Integrator complex subunit 7 yes no 2 0.0032787 85.731 By MS/MS By MS/MS 1 1 9354700 4938600 4416100 5538 106 6299 13878;13879 13434;13435 13434 188 2 SLEDQVEMLR IELQAGKKSLEDQVEM EDQVEMLRTVKEEAEK K S L L R T 0 1 0 1 0 1 2 0 0 0 2 0 1 0 0 1 0 0 0 1 0 0 10 0 1218.5914 K7ELL7;P14314 K7ELL7 168 177 PRKCSH Glucosidase 2 subunit beta yes no 2 0.0037694 107.15 By MS/MS By MS/MS 1 1 3198200 0 3198200 5539 1382 6300 13880;13881 13436;13437 13436 482 2 SLEELLLDANQLR EEIYRYSRSLEELLLD LLDANQLRELPKPFFR R S L L R E 1 1 1 1 0 1 2 0 0 0 5 0 0 0 0 1 0 0 0 0 0 0 13 0 1512.8148 A0A0G2JNZ2;Q14160;A0A0G2JPP5;Q5T0G3;Q9BTT6 A0A0G2JNZ2 37 49 SCRIB;LRRC1 Protein scribble homolog;Leucine-rich repeat-containing protein 1 yes no 2 2.2906E-14 154.1 By MS/MS 1 2556100 0 2556100 5540 361 6301 13882 13438 13438 667 1 SLEGGGCPAR EEGKRSRRSLEGGGCP EGGGCPARAPEPGPTG R S L A R A 1 1 0 0 1 0 1 3 0 0 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1002.4553 Q9Y613 Q9Y613 367 376 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.0028325 89.679 By MS/MS By MS/MS 1 1 17689000 8892100 8797100 5541 3141 6302 13883;13884 13439;13440 13440 6723 2 SLELNGAVEPSEGAPR RVRSLLGRSLELNGAV EPSEGAPRAPPGPAGL R S L P R A 2 1 1 0 0 0 3 2 0 0 2 0 0 0 2 2 0 0 0 1 0 0 16 0 1624.8057 R4GN16;F5GYK2;Q9NRL3;M0R2A7;M0QYS2;M0R0P4 R4GN16 56 71 STRN4 Striatin-4 yes no 2 6.817E-07 130.02 By MS/MS By MS/MS 2 3 44911000 22622000 22289000 5542 948 6303;6304 13885;13886;13887;13888;13889 13441;13442;13443;13444 13444 39 1782 4 SLELSSLAGPGEDPLSADSLGKPTR EKWQEHRRSLELSSLA DSLGKPTRVPGGAELS R S L T R V 2 1 0 2 0 0 2 3 0 0 5 1 0 0 3 5 1 0 0 0 0 0 25 1 2496.2708 G5E953;Q13615 G5E953 511 535 MTMR3 Myotubularin-related protein 3 yes no 3 9.0557E-07 114.03 By MS/MS By MS/MS 1 1 37402000 18226000 19175000 5543 1096 6305 13890;13891 13445;13446;13447;13448 13448 2058 4 SLENPTPPFTPK STSSLSTRSLENPTPP PTPPFTPKMGRRSIES R S L P K M 0 0 1 0 0 0 1 0 0 0 1 1 0 1 4 1 2 0 0 0 0 0 12 0 1326.682 O15085 O15085 663 674 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 2 1.7359E-07 99.788 By MS/MS By MS/MS 1 1 3589300 3589300 0 5544 1472 6306 13892;13893 13449;13450 13449 7299 1 SLESINSR VAAKKTKKSLESINSR SLESINSRLQLVMKSG K S L S R L 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 8 0 904.46141 E5RI99;P62888;E5RJH3;A0A0C4DH44 E5RI99 10 17 RPL30 60S ribosomal protein L30 yes no 2 0.03096 61.56 By matching By MS/MS 1 1 23131000 12099000 11032000 5545 783 6307 13894;13895 13451 13451 1 SLESLADGGSASPIKDQPVMAVK EKERPEHKSLESLADG DQPVMAVKTGEDGSNL K S L V K T 3 0 0 2 0 1 1 2 0 1 2 2 1 0 2 4 0 0 0 2 0 0 23 1 2299.173 Q9HB96 Q9HB96 238 260 FANCE Fanconi anemia group E protein yes yes 3 0.0018363 63.998 By MS/MS 2 12541000 12541000 0 5546 2867 6308;6309 13896;13897 13452;13453 13453 1137 6035 2 SLEVIPEKANDETGE ADVQKPRRSLEVIPEK KANDETGE________ R S L G E - 1 0 1 1 0 0 4 1 0 1 1 1 0 0 1 1 1 0 0 1 0 0 15 1 1629.7734 Q9UPR0 Q9UPR0 1113 1127 PLCL2 Inactive phospholipase C-like protein 2 yes yes 2 0.0011325 101.2 By matching By MS/MS 1 1 22491000 10120000 12371000 5547 3067 6310 13898;13899 13454 13454 6482 1 SLEVRSPEYTEVELK NSRYVEMKSLEVRSPE EYTEVELKQPLSLPSW K S L L K Q 0 1 0 0 0 0 4 0 0 0 2 1 0 0 1 2 1 0 1 2 0 0 15 1 1777.9098 Q5T481 Q5T481 1115 1129 RBM20 RNA-binding protein 20 yes yes 2;3 0.001578 106.36 By MS/MS By MS/MS 2 1 22620000 14832000 7788200 5548 2239 6311 13900;13901;13902 13455;13456;13457 13457 4488 3 SLFSPQNTLAAPTGHPPTSGVEK SPHPVPHRSLFSPQNT PPTSGVEKVLASTIST R S L E K V 2 0 1 0 0 1 1 2 1 0 2 1 0 1 4 3 3 0 0 1 0 0 23 0 2335.1808 Q5VT52 Q5VT52 973 995 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.005379 53.304 By MS/MS By MS/MS 1 1 18057000 10795000 7261800 5549 2264 6312 13903;13904 13458;13459 13459 4545 2 SLFSSIGEVESAK NMTQDELRSLFSSIGE IGEVESAKLIRDKVAG R S L A K L 1 0 0 0 0 0 2 1 0 1 1 1 0 1 0 4 0 0 0 1 0 0 13 0 1352.6824 Q15717;M0QZR9 Q15717 38 50 ELAVL1 ELAV-like protein 1 yes no 2 0.0025013 110.08 By MS/MS 1 3576200 0 3576200 5550 2152 6313 13905 13460 13460 1 SLFTSQPSGEAEAPQTTDSPTTK KSTPVRPKSLFTSQPS TTDSPTTKVQKDPSIK K S L T K V 2 0 0 1 0 2 2 1 0 0 1 1 0 1 3 4 5 0 0 0 0 0 23 0 2379.1078 H0YN99;Q9H792 H0YN99 819 841 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2;3 0.0052683 64.476 By MS/MS 2 15501000 0 15501000 5551 1218 6314 13906;13907 13461;13462;13463 13463 2279 3 SLGGAVGSVASGAR APAAPRSRSLGGAVGS GSVASGARAAQSPFSI R S L A R A 3 1 0 0 0 0 0 4 0 0 1 0 0 0 0 3 0 0 0 2 0 0 14 0 1187.6258 Q8NHG8 Q8NHG8 82 95 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 yes yes 2 0.0016028 89.506 By MS/MS By MS/MS 1 1 23439000 11359000 12080000 5552 2524 6315 13908;13909 13464;13465 13464 5152 2 SLGGESSGGTTPVGSFHTEAAR LAHRELLKSLGGESSG SFHTEAARWTDGSLSP K S L A R W 2 1 0 0 0 0 2 5 1 0 1 0 0 1 1 4 3 0 0 1 0 0 22 0 2103.9821 O15085 O15085 1452 1473 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 3 0.0031241 60.171 By MS/MS By MS/MS 2 1 21148000 15828000 5320100 5553 1472 6316;6317 13910;13911;13912 13466;13467 13466 2748;2749;7300;7301 2 SLGGSATSLCLLPSEETSGEESR EPEVVLGRSLGGSATS ETSGEESRAAVGPRRS R S L S R A 1 1 0 0 1 0 4 3 0 0 4 0 0 0 1 6 2 0 0 0 0 0 23 0 2366.0907 Q9P244 Q9P244 642 664 LRFN1 Leucine-rich repeat and fibronectin type III domain-containing protein 1 yes yes 2 0.0031759 68.168 By MS/MS 1 4619500 4619500 0 5554 2971 6318 13913 13468;13469 13469 6259 2 SLGNILQAKPTSSPAK AVAPAQEKSLGNILQA KPTSSPAKGPPQKAGP K S L A K G 2 0 1 0 0 1 0 1 0 1 2 2 0 0 2 3 1 0 0 0 0 0 16 1 1610.8992 J3KQ96;E7ETY2;Q13428 J3KQ96 571 586 TCOF1 Treacle protein no no 2;3 1.2686E-05 130.64 By MS/MS By MS/MS 2 2 148350000 84039000 64311000 5555 822;2059 6319 13914;13915;13916;13917 13470;13471;13472;13473;13474 13471 1506;1507;7089 5 SLGNILQAKPTSSPAKGPPQK AVAPAQEKSLGNILQA PAKGPPQKAGPVAVQV K S L Q K A 2 0 1 0 0 2 0 2 0 1 2 3 0 0 4 3 1 0 0 0 0 0 21 2 2118.1797 J3KQ96;E7ETY2;Q13428 J3KQ96 571 591 TCOF1 Treacle protein no no 3;4 1.0316E-46 178.45 By MS/MS By MS/MS 2 2 381680000 208230000 173440000 5556 822;2059 6320 13918;13919;13920;13921 13475;13476;13477;13478;13479 13479 1506;1507;7089 5 SLGNVWPGEEEPCNDATTPSYK GEQAGRGRSLGNVWPG DATTPSYKKPLYGISH R S L Y K K 1 0 2 1 1 0 3 2 0 0 1 1 0 0 3 2 2 1 1 1 0 0 22 0 2450.0696 Q5T5X7 Q5T5X7 107 128 BEND3 BEN domain-containing protein 3 yes yes 2 0.014356 92.939 By MS/MS 1 0 0 0 5557 2242 6321 13922 13480 13480 7645;7646 1 SLGPSLATDKS PQNAIRQRSLGPSLAT PSLATDKS________ R S L K S - 1 0 0 1 0 0 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 11 1 1074.5557 Q9H3N1 Q9H3N1 270 280 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.0038428 86.262 By MS/MS By MS/MS 1 1 410300000 217270000 193030000 5558 2827 6322 13923;13924 13481;13482 13482 5931 2 SLGSASPGPGQPPLSSPTR SKSNGQPKSLGSASPG PPLSSPTRGGVKKVSG K S L T R G 1 1 0 0 0 1 0 3 0 0 2 0 0 0 5 5 1 0 0 0 0 0 19 0 1791.9115 Q9C0B5 Q9C0B5 679 697 ZDHHC5 Palmitoyltransferase ZDHHC5 yes yes 2 2.5953E-06 127.01 By MS/MS By MS/MS 1 1 27527000 15815000 11712000 5559 2790 6323 13925;13926 13483;13484 13483 5805;5806 2 SLGTTIDPVNSFDNATK S L T K 1 0 2 2 0 0 0 1 0 1 1 1 0 1 1 2 3 0 0 1 0 0 17 0 1778.8687 REV__E9PKT1 yes no 2 0.023336 46.73 By MS/MS By matching 1 1 28995000 15731000 13264000 + 5560 3179 6324 13927;13928 13485 13485 6774 1 SLGVLPFTLNSGSPEK SKSRHRSRSLGVLPFT LNSGSPEKTCSQVSSY R S L E K T 0 0 1 0 0 0 1 2 0 0 3 1 0 1 2 3 1 0 0 1 0 0 16 0 1644.8723 P42695 P42695 1372 1387 NCAPD3 Condensin-2 complex subunit D3 yes yes 2 3.0745E-42 178.52 By MS/MS By MS/MS 1 1 35692000 21758000 13934000 5561 1829 6325 13929;13930 13486;13487 13486 3454 2 SLGYHGSSYSPEGVEPVSPVSSPSLTHDK SIQELELRSLGYHGSS SPSLTHDKGLPKHLEE R S L D K G 0 0 0 1 0 0 2 3 2 0 2 1 0 0 4 8 1 0 2 3 0 0 29 0 2999.4149 C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9J7T7 C9JE98 2027 2055 NCOR2 Nuclear receptor corepressor 2 yes no 3 0.00014183 68.587 By matching By MS/MS 1 1 36589000 17011000 19578000 5562 625 6326 13931;13932 13488 13488 1171;1172;1173 1 SLHGPCPVTTFGPK TKEFRRTRSLHGPCPV PVTTFGPKACVLQNPQ R S L P K A 0 0 0 0 1 0 0 2 1 0 1 1 0 1 3 1 2 0 0 1 0 0 14 0 1496.7446 O95544 O95544 64 77 NADK NAD kinase yes yes 2 0.0049204 79.885 By MS/MS By MS/MS 1 1 18198000 10446000 7751600 5563 1599 6327 13933;13934 13489;13490 13490 3032 2 SLHLSPQEQSASYQDR HQERLQSKSLHLSPQE QSASYQDRRQSWRRAS K S L D R R 1 1 0 1 0 3 1 0 1 0 2 0 0 0 1 4 0 0 1 0 0 0 16 0 1844.8653 Q5JW53;Q9H410 Q5JW53 77 92 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.0035661 78.508 By MS/MS By MS/MS 1 1 12061000 6545700 5515300 5564 2226 6328 13935;13936 13491;13492 13492 4458 2 SLHPWYGITPTSSPK GHPESTPKSLHPWYGI ITPTSSPKTKKRPAPR K S L P K T 0 0 0 0 0 0 0 1 1 1 1 1 0 0 3 3 2 1 1 0 0 0 15 0 1669.8464 Q8N3F8;H0Y6J8 Q8N3F8 459 473 MICALL1 MICAL-like protein 1 yes no 2;3 0.0016079 94.538 By MS/MS By MS/MS 1 2 16942000 8448900 8493300 5565 2466 6329 13937;13938;13939 13493;13494;13495 13494 8394 3 SLIINTFYSNK ________________ INTFYSNKEIFLQELI M S L N K E 0 0 2 0 0 0 0 0 0 2 1 1 0 1 0 2 1 0 1 0 0 0 11 0 1298.6871 Q58FF6 Q58FF6 2 12 HSP90AB4P Putative heat shock protein HSP 90-beta 4 yes yes 2 2.0471E-06 147.4 By MS/MS By MS/MS 1 1 11910000 6452100 5457600 5566 2209 6330 13940;13941 13496;13497 13497 2 SLIPDIKPLAGQEAVVDLHADDSRISEDETER SITTESLKSLIPDIKP ISEDETERNGDDGTHD K S L E R N 3 2 0 5 0 1 4 1 1 3 3 1 0 0 2 3 1 0 0 2 0 0 32 2 3517.7536 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 815 846 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 4 0.010997 47.439 By matching By MS/MS 1 1 152910000 64249000 88656000 5567 810;1073 6331 13942;13943 13498 13498 1458;1459 1 SLKESEQESEEEILAQK VEGNKGTKSLKESEQE EEEILAQKKEQREEEV K S L Q K K 1 0 0 0 0 2 6 0 0 1 2 2 0 0 0 3 0 0 0 0 0 0 17 1 1975.9586 Q9BW71 Q9BW71 219 235 HIRIP3 HIRA-interacting protein 3 yes yes 2;3 0.0024197 115.91 By MS/MS By MS/MS 2 2 51625000 24526000 27099000 5568 2760 6332 13944;13945;13946;13947 13499;13500;13501;13502 13500 5745;5746 4 SLKESEQESEEEILAQKK VEGNKGTKSLKESEQE EEILAQKKEQREEEVE K S L K K E 1 0 0 0 0 2 6 0 0 1 2 3 0 0 0 3 0 0 0 0 0 0 18 2 2104.0536 Q9BW71 Q9BW71 219 236 HIRIP3 HIRA-interacting protein 3 yes yes 3 0.00028751 106.72 By MS/MS By MS/MS 1 1 103380000 36656000 66728000 5569 2760 6333 13948;13949 13503;13504 13503 5745;5746 2 SLKQPLEQNQTISPLSTYEESK LKKINSKRSLKQPLEQ LSTYEESKVSKYAFEL R S L S K V 0 0 1 0 0 3 3 0 0 1 3 2 0 0 2 4 2 0 1 0 0 0 22 1 2519.2755 Q9UQR1 Q9UQR1 400 421 ZNF148 Zinc finger protein 148 yes yes 3 4.1798E-06 124.45 By MS/MS By MS/MS 1 1 62849000 37771000 25078000 5570 3080 6334 13950;13951 13505;13506 13505 6620;6621;7940 2 SLLFGAMSEMISPSEK VQSIRSPKSLLFGAMS EMISPSEKGSARMKKR K S L E K G 1 0 0 0 0 0 2 1 0 1 2 1 2 1 1 4 0 0 0 0 0 0 16 0 1725.8317 Q7Z2Z1 Q7Z2Z1 1067 1082 TICRR Treslin yes yes 2 0.00017086 98.165 By matching By MS/MS 1 1 13855000 6720300 7135000 5571 2373 6335 13952;13953 13507 13507 955;956 4813 1 SLLGDSAPTLHLNKGTPSQSPVVGR TPEVKPLKSLLGDSAP SQSPVVGRSQGQQQEK K S L G R S 1 1 1 1 0 1 0 3 1 0 4 1 0 0 3 4 2 0 0 2 0 0 25 1 2530.3503 P52594;C9J2I0;B8ZZY2 P52594 162 186 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 3 0.0087393 67.11 By MS/MS By MS/MS 1 1 28959000 13873000 15086000 5572 1887 6336 13954;13955 13508;13509 13508 3654;3655;7484 2 SLLGIDTEDAIQGR QGLDLSSRSLLGIDTE TEDAIQGRNESCDISK R S L G R N 1 1 0 2 0 1 1 2 0 2 2 0 0 0 0 1 1 0 0 0 0 0 14 0 1486.7627 P49454 P49454 1750 1763 CENPF Centromere protein F yes yes 2 0.00083542 95.981 By MS/MS By matching 1 1 13164000 7956900 5206700 5573 1854 6337 13956;13957 13510 13510 3567 1 SLLQSEQQPSWTDDLPLCHLSGVGSASNR ________________ GVGSASNRSYSADGKG R S L N R S 1 1 1 2 1 3 1 2 1 0 5 0 0 0 2 6 1 1 0 1 0 0 29 0 3181.5098 Q15750 Q15750 7 35 TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes yes 3 3.2415E-10 98.015 By MS/MS 1 9166900 0 9166900 5574 2155 6338 13958 13511;13512 13511 4279 2 SLLSHEFQDETDTEEETLYSSKH MMSTGSKKSLLSHEFQ ETLYSSKH________ K S L K H - 0 0 0 2 0 1 5 0 2 0 3 1 0 1 0 4 3 0 1 0 0 0 23 1 2724.2039 O75976 O75976 1358 1380 CPD Carboxypeptidase D yes yes 3 0.0014226 94.271 By MS/MS By MS/MS 1 1 17355000 9756500 7598000 5575 1561 6339 13959;13960 13513;13514 13513 2949;2950;7344;8207 2 SLMSISNAGSGLLSHSSTLTGSPIMEEK LSCMRPAKSLMSISNA GSPIMEEKRDDKSWKG K S L E K R 1 0 1 0 0 0 2 3 1 2 4 1 2 0 1 8 2 0 0 0 0 0 28 0 2833.3838 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 787 814 AMOT Angiomotin yes no 3 7.2029E-09 88.571 By MS/MS By MS/MS 2 2 217610000 121550000 96055000 5576 2197 6340 13961;13962;13963;13964 13515;13516 13516 880;881 4396;7629 2 SLMSSPEDLTK AKELEAERSLMSSPED SSPEDLTKDFEELKAE R S L T K D 0 0 0 1 0 0 1 0 0 0 2 1 1 0 1 3 1 0 0 0 0 0 11 0 1206.5802 P46821 P46821 828 838 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.00068162 86.262 By MS/MS By MS/MS 3 3 182570000 93081000 89491000 5577 1840 6341;6342 13965;13966;13967;13968;13969;13970 13517;13518;13519;13520;13521;13522;13523 13519 710 3503;3504 7 SLMSSPEDLTKDFEELKAEEVDVTK AKELEAERSLMSSPED AEEVDVTKDIKPQLEL R S L T K D 1 0 0 3 0 0 5 0 0 0 3 3 1 1 1 3 2 0 0 2 0 0 25 2 2839.3685 P46821 P46821 828 852 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.011958 55.02 By MS/MS By MS/MS 1 1 21124000 7983500 13141000 5578 1840 6343 13971;13972 13524;13525 13525 710 3503;3504 2 SLNDPRDSQKNFVDPVTK LIDRDLYRSLNDPRDS NFVDPVTKKKVSYVQL R S L T K K 0 1 2 3 0 1 0 0 0 0 1 2 0 1 2 2 1 0 0 2 0 0 18 2 2059.0334 P15924 P15924 2161 2178 DSP Desmoplakin yes yes 2 0.031016 48.277 By MS/MS 1 4460400 4460400 0 5579 1708 6344 13973 13526 13526 0 SLNFQEDDDTSR KKMKQAIKSLNFQEDD QEDDDTSRETFASDTN K S L S R E 0 1 1 3 0 1 1 0 0 0 1 0 0 1 0 2 1 0 0 0 0 0 12 0 1425.6008 Q9H814 Q9H814 340 351 PHAX Phosphorylated adapter RNA export protein yes yes 2 9.0208E-05 76.759 By matching By MS/MS 1 1 5130500 3126200 2004300 5580 2853 6345 13974;13975 13527 13527 6014 0 SLNLQAESVR DIERASFRSLNLQAES NLQAESVRGFNMGRAI R S L V R G 1 1 1 0 0 1 1 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1115.5935 Q12923 Q12923 890 899 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.0019374 107.09 By MS/MS By MS/MS 1 1 73218000 35389000 37829000 5581 2034 6346 13976;13977 13528;13529 13529 3987 2 SLPAGDALYLSFNPPQPSR RPVDPRRRSLPAGDAL FNPPQPSRGTDRLDLP R S L S R G 2 1 1 1 0 1 0 1 0 0 3 0 0 1 4 3 0 0 1 0 0 0 19 0 2029.0269 V9GYM8;Q92974;V9GYF0 V9GYM8 931 949 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2;3 4.3446E-23 154.31 By MS/MS By MS/MS 2 1 45489000 29419000 16070000 5582 2613 6347 13978;13979;13980 13530;13531;13532 13530 5376 3 SLPAPVAQRPDSPGGGLQAPGQK RESQKERKSLPAPVAQ GLQAPGQKRTPRRGEQ K S L Q K R 3 1 0 1 0 3 0 4 0 0 2 1 0 0 5 2 0 0 0 1 0 0 23 1 2227.1709 Q5JVS0 Q5JVS0 97 119 HABP4 Intracellular hyaluronan-binding protein 4 yes yes 3 0.015363 48.354 By MS/MS By MS/MS 1 1 40961000 18674000 22287000 5583 2225 6348 13981;13982 13533;13534 13534 4455 2 SLPEEDVAEIQHAEEFLIKPESK HKKKKERKSLPEEDVA FLIKPESKVAKLDTSQ K S L S K V 2 0 0 1 0 1 6 0 1 2 2 2 0 1 2 2 0 0 0 1 0 0 23 1 2637.3174 O60832;H7C2Q9;H7C0M1;C9IYT0 O60832 21 43 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 3 1.4643E-05 99.859 By matching By MS/MS 1 1 28635000 10784000 17851000 5584 1530 6349 13983;13984 13535 13535 2894 1 SLPGPAPCLK APPLQSARSLPGPAPC PGPAPCLKHFPLDLRT R S L L K H 1 0 0 0 1 0 0 1 0 0 2 1 0 0 3 1 0 0 0 0 0 0 10 0 1038.5532 H0Y360;Q01433;H0YCL9;E9PJF6 H0Y360 71 80 AMPD2 AMP deaminase 2 yes no 2 0.013029 71.221 By MS/MS By MS/MS 1 1 210190000 102660000 107530000 5585 1114 6350 13985;13986 13536;13537 13537 2106 2 SLPRPHDFFDAQTLDAIR KLKNKRRRSLPRPHDF AQTLDAIRHRAICFNL R S L I R H 2 2 0 3 0 1 0 0 1 1 2 0 0 2 2 1 1 0 0 0 0 0 18 1 2098.0596 Q6ZN18;G5EA50 Q6ZN18 390 407 AEBP2 Zinc finger protein AEBP2 yes no 3 0.00066247 82.362 By MS/MS By MS/MS 1 1 10927000 5826600 5100800 5586 2348 6351 13987;13988 13538;13539 13539 4765 2 SLPSSSQLKGSPQAISR SPLYLVSRSLPSSSQL GSPQAISRASELHLLE R S L S R A 1 1 0 0 0 2 0 1 0 1 2 1 0 0 2 6 0 0 0 0 0 0 17 1 1741.9323 Q8WYP5 Q8WYP5 1150 1166 AHCTF1 Protein ELYS yes yes 2;3 0.00056644 112.91 By MS/MS By matching 2 2 98681000 39174000 59507000 5587 2575 6352 13989;13990;13991;13992 13540;13541 13540 5281 2 SLPTPAVLLSPTKEPPPLLAKPK NGKANSNKSLPTPAVL PPLLAKPKLDPLKLQQ K S L P K L 2 0 0 0 0 0 1 0 0 0 5 3 0 0 7 2 2 0 0 1 0 0 23 2 2393.4298 Q8WX93 Q8WX93 632 654 PALLD Palladin yes yes 3 0.0058541 64.26 By MS/MS By MS/MS 1 1 16159000 9787300 6371400 5588 2566 6353 13993;13994 13542;13543;13544 13543 5260 3 SLPTTVPESPNYR PEPSTIARSLPTTVPE VPESPNYRNTRTPRTP R S L Y R N 0 1 1 0 0 0 1 0 0 0 1 0 0 0 3 2 2 0 1 1 0 0 13 0 1459.7307 Q6PKG0;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 766 778 LARP1 La-related protein 1 yes no 2;3 1.2274E-10 144.28 By MS/MS By MS/MS 6 6 1152100000 592090000 559970000 5589 2330 6354;6355;6356 13995;13996;13997;13998;13999;14000;14001;14002;14003;14004;14005;14006 13545;13546;13547;13548;13549;13550;13551;13552;13553;13554;13555;13556 13545 4701;4702;7668 12 SLPVSVPVWGFK LPTQQYAKSLPVSVPV SVPVWGFKEKRTEARS K S L F K E 0 0 0 0 0 0 0 1 0 0 1 1 0 1 2 2 0 1 0 3 0 0 12 0 1314.7336 Q96B36 Q96B36 183 194 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 9.5243E-05 122.46 By MS/MS By MS/MS 1 1 337320000 189810000 147500000 5590 2624 6357 14007;14008 13557;13558 13558 5398 2 SLQCMDNNLLQARAALQTAYVEVQR LREEELSKSLQCMDNN TAYVEVQRLLMLKQQI K S L Q R L 4 2 2 1 1 4 1 0 0 0 4 0 1 0 0 1 1 0 1 2 0 0 25 1 2891.4382 Q9H2Y7;A0A0C4DGM5;H3BS99;U3KQH7 Q9H2Y7 1066 1090 ZNF106 Zinc finger protein 106 yes no 3 0.024227 41.491 By MS/MS 1 18485000 18485000 0 5591 2824 6358 14009 13559 13559 1122 1 SLQEALQNQLK QKQREEMKSLQEALQN EALQNQLKETSEKAEK K S L L K E 1 0 1 0 0 3 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1270.6881 Q86TE4;E9PP05 Q86TE4 89 99 LUZP2 Leucine zipper protein 2 yes no 2 0.010403 65.232 By MS/MS By matching 2 2 1140400000 570650000 569710000 5592 2398 6359;6360 14010;14011;14012;14013 13560;13561 13561 4895 2 SLQLQLQAPSGNTVPAR ICQAAVPKSLQLQLQA SGNTVPARGGLPITQL K S L A R G 2 1 1 0 0 3 0 1 0 0 3 0 0 0 2 2 1 0 0 1 0 0 17 0 1778.9639 O75843 O75843 720 736 AP1G2 AP-1 complex subunit gamma-like 2 yes yes 2 0.021482 55.452 By MS/MS 1 3263800 3263800 0 5593 1557 6361 14014 13562 13562 2944 1 SLQQLAEER KELNERWRSLQQLAEE LQQLAEERSQLLGSAH R S L E R S 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1072.5513 A0A0D9SF54;A0A0D9SGF6;Q13813 A0A0D9SF54 1197 1205 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 2 0.0081684 80.979 By MS/MS By MS/MS 1 1 39157000 20484000 18673000 5594 341 6362 14015;14016 13563;13564 13563 602 2 SLQTLPTDSSTFDTDTFCPPRPK DMKTGLSRSLQTLPTD TFCPPRPKPVARKGQV R S L P K P 0 1 0 3 1 1 0 0 0 0 2 1 0 2 4 3 5 0 0 0 0 0 23 1 2610.2272 B0QY95;Q9NQG6 B0QY95 94 116 MIEF1 Mitochondrial dynamics protein MID51 yes no 3 0.0042984 57.803 By matching By MS/MS 1 1 12069000 6096500 5973000 5595 514 6363 14017;14018 13565 13565 973 1 SLRTMEQQFQKMK GKDEDAKKSLRTMEQQ EQQFQKMKIQYEQRLE K S L M K I 0 1 0 0 0 3 1 0 0 0 1 2 2 1 0 1 1 0 0 0 0 0 13 2 1653.8331 Q5TB80 Q5TB80 986 998 CEP162 Centrosomal protein of 162 kDa yes yes 2 0.010616 69.229 By matching By MS/MS 1 1 70295000 40226000 30068000 5596 2251 6364 14019;14020 13566 13566 900 4506 0 SLSAIDR IATGGTPRSLSAIDRA RSLSAIDRAGAEVKSR R S L D R A 1 1 0 1 0 0 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 0 7 0 760.40792 O95831 O95831 266 272 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes yes 2 0.026542 80.165 By MS/MS By MS/MS 1 1 35320000 16905000 18415000 5597 1610 6365 14021;14022 13567;13568 13567 3053 2 SLSAPGNLLTK EGSRREERSLSAPGNL APGNLLTKKPTRECES R S L T K K 1 0 1 0 0 0 0 1 0 0 3 1 0 0 1 2 1 0 0 0 0 0 11 0 1099.6237 F5GZ00;Q96RR4 F5GZ00 296 306 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 yes no 2 0.0052154 80.871 By MS/MS 1 3696300 3696300 0 5598 950 6366 14023 13569;13570 13570 1786 2 SLSAPLHPEFEEVYR TPRRRMKKSLSAPLHP PEFEEVYRFGAESRKL K S L Y R F 1 1 0 0 0 0 3 0 1 0 2 0 0 1 2 2 0 0 1 1 0 0 15 0 1772.8733 Q53HC0 Q53HC0 209 223 CCDC92 Coiled-coil domain-containing protein 92 yes yes 2;3 0.00060788 101.2 By MS/MS By MS/MS 2 2 58948000 34358000 24589000 5599 2206 6367 14024;14025;14026;14027 13571;13572 13572 4417;4418 2 SLSDNGQPGTPDPADSGGTSAK EEKEYTCKSLSDNGQP DSGGTSAKESECITKP K S L A K E 2 0 1 3 0 1 0 4 0 0 1 1 0 0 3 4 2 0 0 0 0 0 22 0 2057.9138 O75691 O75691 1732 1753 UTP20 Small subunit processome component 20 homolog yes yes 2;3 1.1898E-34 164.56 By MS/MS By MS/MS 4 4 133470000 69324000 64144000 5600 1553 6368;6369 14028;14029;14030;14031;14032;14033;14034;14035 13573;13574;13575;13576;13577;13578;13579;13580 13573 61 7343 8 SLSDSESDDSK EKDGTKRKSLSDSESD DSESDDSKSKKKRDAA K S L S K S 0 0 0 3 0 0 1 0 0 0 1 1 0 0 0 5 0 0 0 0 0 0 11 0 1168.4732 Q13185;S4R2Y4 Q13185 93 103 CBX3 Chromobox protein homolog 3 yes no 2 6.614E-21 179.6 By MS/MS By MS/MS 3 3 82878000 41631000 41247000 5601 2048 6370 14036;14037;14038;14039;14040;14041 13581;13582;13583;13584;13585;13586;13587;13588;13589;13590;13591;13592 13586 4018;4019;4020 12 SLSEEVESSESGELPEVDVK EFMLKLMRSLSEEVES ELPEVDVKSEHSGKKV R S L V K S 0 0 0 1 0 0 6 1 0 0 2 1 0 0 1 5 0 0 0 3 0 0 20 0 2147.9958 Q9UKA4 Q9UKA4 1169 1188 AKAP11 A-kinase anchor protein 11 yes yes 2 6.5098E-175 232.73 By MS/MS By MS/MS 1 1 0 0 0 5602 3021 6371 14042;14043 13593;13594 13593 6368 2 SLSEINKPNFYNNDFDDDFSHR QTSHLQARSLSEINKP FDDDFSHRSSENILTV R S L H R S 0 1 4 4 0 0 1 0 1 1 1 1 0 3 1 3 0 0 1 0 0 0 22 1 2673.1732 J3KP30;Q5QJE6 J3KP30 251 272 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 3 0.0017381 65.741 By MS/MS By MS/MS 1 1 19470000 11830000 7639800 5603 1325 6372 14044;14045 13595;13596 13596 2458 2 SLSEQPVMDTATATEQAK TSQGGVKRSLSEQPVM ATATEQAKQLVKSGAI R S L A K Q 3 0 0 1 0 2 2 0 0 0 1 1 1 0 1 2 3 0 0 1 0 0 18 0 1905.899 P18615;A0A0A0MT02;A0A0G2JI50;E9PD43;A0A0A0MSN9;A2ABK4 P18615 49 66 NELFE Negative elongation factor E yes no 2 1.8156E-43 172.55 By MS/MS By MS/MS 2 2 555560000 240560000 315000000 5604 1726 6373;6374 14046;14047;14048;14049 13597;13598;13599;13600;13601 13598 645 3251;3252 5 SLSESYELSSDLQDK EEAIKRSRSLSESYEL LSSDLQDKQVEMLERK R S L D K Q 0 0 0 2 0 1 2 0 0 0 3 1 0 0 0 5 0 0 1 0 0 0 15 0 1699.7788 A0A087WWK8;Q6DN90 A0A087WWK8 91 105 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2 5.3134E-21 157.07 By MS/MS By MS/MS 1 1 10119000 4805200 5313300 5605 91 6375 14050;14051 13602;13603;13604 13602 167 3 SLSETVTHR SKLSPTKRSLSETVTH LSETVTHRAKIMKIAT R S L H R A 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 2 2 0 0 1 0 0 9 0 1028.5251 A0A1B0GUI1 A0A1B0GUI1 1081 1089 yes yes 2 0.023396 63.694 By matching By MS/MS 1 1 20379000 11598000 8780500 5606 420 6376 14052;14053 13605 13605 785 1 SLSFEMQQDELIEKPMSPMQYAR TSTPKLSKSLSFEMQQ MSPMQYARSGLGTAEM K S L A R S 1 1 0 1 0 3 3 0 0 1 2 1 3 1 2 3 0 0 1 0 0 0 23 1 2757.2812 Q9Y6Y0 Q9Y6Y0 336 358 IVNS1ABP Influenza virus NS1A-binding protein yes yes 3 0.029388 41.939 By MS/MS By matching 1 1 10504000 6267200 4237200 5607 3156 6377 14054;14055 13606 13606 1252;1253 0 SLSFPILNPALSQPSQPSSPLPGSHGR VMPSADPRSLSFPILN PLPGSHGRNSPGLGSL R S L G R N 1 1 1 0 0 2 0 2 1 1 4 0 0 1 6 7 0 0 0 0 0 0 27 0 2770.4402 Q8ND24;E9PN76 Q8ND24 483 509 RNF214 RING finger protein 214 yes no 3 4.1857E-07 109.39 By matching By MS/MS 1 1 37512000 20416000 17095000 5608 2505 6378 14056;14057 13607 13607 5115 1 SLSGLLHSASGGGASGGWR DGLPPLPKSLSGLLHS GGASGGWRHLERLYAQ K S L W R H 2 1 0 0 0 0 0 6 1 0 3 0 0 0 0 5 0 1 0 0 0 0 19 0 1755.8652 Q96GI7 Q96GI7 30 48 FAM89A Protein FAM89A yes yes 3 0.0010101 71.98 By MS/MS 1 21039000 21039000 0 5609 2652 6379 14058 13608;13609;13610 13609 5472 3 SLSGSSPCPK KSRLSLRRSLSGSSPC SGSSPCPKQKSQTPPR R S L P K Q 0 0 0 0 1 0 0 1 0 0 1 1 0 0 2 4 0 0 0 0 0 0 10 0 1018.4753 Q9UQ35;I3L4D8;I3L182 Q9UQ35 778 787 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0025339 100.69 By MS/MS By MS/MS 4 6 123290000 48980000 74311000 5610 3074 6380;6381 14059;14060;14061;14062;14063;14064;14065;14066;14067;14068 13611;13612;13613;13614;13615;13616;13617;13618;13619;13620 13617 6554;6555;6556;6557 9 SLSGTVVSER ENLRRISRSLSGTVVS SGTVVSEREEAPVSSH R S L E R E 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 3 1 0 0 2 0 0 10 0 1033.5404 Q70EL1 Q70EL1 1418 1427 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 yes yes 2 0.011182 73.632 By MS/MS By matching 1 1 8104800 3624100 4480700 5611 2358 6382 14069;14070 13621 13621 4780 1 SLSGTVVSEREEAPVSSHSFDSSNVR ENLRRISRSLSGTVVS SFDSSNVRKPLETGHR R S L V R K 1 2 1 1 0 0 3 1 1 0 1 0 0 1 1 8 1 0 0 4 0 0 26 1 2762.3107 Q70EL1 Q70EL1 1418 1443 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 yes yes 3 0.015293 47.66 By MS/MS By MS/MS 1 1 25327000 13834000 11493000 5612 2358 6383 14071;14072 13622;13623 13623 4780 2 SLSIEIGHEVK RSKVTAIKSLSIEIGH IEIGHEVKTQNKLLAE K S L V K T 0 0 0 0 0 0 2 1 1 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1210.6558 C9JTT8;Q68DU7;H7C1N3;O15155 C9JTT8 48 58 BET1;DKFZp781C0425 BET1 homolog yes no 2;3 9.3967E-06 138.2 By MS/MS By MS/MS 2 2 196420000 108140000 88279000 5613 694 6384 14073;14074;14075;14076 13624;13625;13626;13627;13628 13626 1288 5 SLSKSDSDLLTCSPTEDATMGSR KAELKLSRSLSKSDSD EDATMGSRSESLSNCS R S L S R S 1 1 0 3 1 0 1 1 0 0 3 1 1 0 1 6 3 0 0 0 0 0 23 1 2457.0999 Q92625 Q92625 622 644 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 3 0.028418 46.668 By MS/MS By matching 1 1 26485000 13468000 13016000 5614 2592 6385 14077;14078 13629 13629 1036 5326 1 SLSLDPGQSLEPHPEGPQR QGNRILVKSLSLDPGQ PHPEGPQRLRSDPGPP K S L Q R L 0 1 0 1 0 2 2 2 1 0 3 0 0 0 4 3 0 0 0 0 0 0 19 0 2043.0021 P98174 P98174 114 132 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 yes yes 3 0.00040303 81.89 By MS/MS By matching 1 1 22846000 12247000 10600000 5615 1971 6386 14079;14080 13630;13631 13631 3774 2 SLSLEATSPLSAEK SEILSQPKSLSLEATS TSPLSAEKHSCTVPEG K S L E K H 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 4 1 0 0 0 0 0 14 0 1431.7457 H3BN63;Q86YC2 H3BN63 85 98 PALB2 Partner and localizer of BRCA2 yes no 2 1.553E-80 214.58 By MS/MS By MS/MS 1 1 20775000 11523000 9252200 5616 1232 6387 14081;14082 13632;13633 13632 2303 2 SLSLESTDR PASPRKTKSLSLESTD LSLESTDRGSWDP___ K S L D R G 0 1 0 1 0 0 1 0 0 0 2 0 0 0 0 3 1 0 0 0 0 0 9 0 1006.4931 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25 H0Y7V8 971 979 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha yes no 2 0.022927 64.103 By matching By MS/MS 1 1 9740100 5223800 4516300 5617 218 6388 14083;14084 13634 13634 380 1 SLSLGDKEISR SVQGSHKRSLSLGDKE LGDKEISRSSPSPALE R S L S R S 0 1 0 1 0 0 1 1 0 1 2 1 0 0 0 3 0 0 0 0 0 0 11 1 1203.6459 Q9UMZ2 Q9UMZ2 1073 1083 SYNRG Synergin gamma yes yes 2 0.0029023 102.33 By MS/MS By MS/MS 1 1 109530000 64036000 45496000 5618 3056 6389 14085;14086 13635;13636 13635 6455;6456 2 SLSLQPQLTQR PRLSTRPRSLSLQPQL LQPQLTQRSGLQ____ R S L Q R S 0 1 0 0 0 3 0 0 0 0 3 0 0 0 1 2 1 0 0 0 0 0 11 0 1269.7041 P21731 P21731 329 339 TBXA2R Thromboxane A2 receptor yes yes 2 0.0087221 75.89 By matching By MS/MS 1 1 6515000 3330300 3184800 5619 1743 6390 14087;14088 13637 13637 3282 1 SLSMDSQVPVYSPSIDLK LVKSLLRRSLSMDSQV YSPSIDLKSSQGSSSV R S L L K S 0 0 0 2 0 1 0 0 0 1 2 1 1 0 2 5 0 0 1 2 0 0 18 0 1964.9765 Q9ULJ3 Q9ULJ3 343 360 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2 1.5864E-06 131.48 By MS/MS By MS/MS 2 2 69813000 36774000 33039000 5620 3043 6391;6392 14089;14090;14091;14092 13638;13639;13640;13641 13640 1207 6415;6416 4 SLSMVDLQDAR LQMANGGKSLSMVDLQ MVDLQDARTLDGEAGS K S L A R T 1 1 0 2 0 1 0 0 0 0 2 0 1 0 0 2 0 0 0 1 0 0 11 0 1233.6023 H0Y3A3;Q5VWQ8 H0Y3A3 654 664 DAB2IP Disabled homolog 2-interacting protein yes no 2 0.0023104 77.279 By matching By MS/MS 1 1 16634000 8115100 8519300 5621 1116 6393 14093;14094 13642 13642 405 2112 1 SLSNSNPDISGTPTSPDDEVR SLNLNRSRSLSNSNPD TSPDDEVRSIIGSKGL R S L V R S 0 1 2 3 0 0 1 1 0 1 1 0 0 0 3 5 2 0 0 1 0 0 21 0 2186.9927 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 896 916 DOCK7 Dedicator of cytokinesis protein 7 yes no 2;3 1.2633E-46 177.41 By MS/MS By MS/MS 3 3 117730000 51882000 65848000 5622 2689 6394;6395 14095;14096;14097;14098;14099;14100 13643;13644;13645;13646;13647;13648;13649 13644 5551;5552;5553;5554;5555;7801;7802 7 SLSPGGAALGYR PGGGGGQRSLSPGGAA GGAALGYRDYRLQQLA R S L Y R D 2 1 0 0 0 0 0 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 12 0 1147.5986 A0A087WWP4;Q96T37 A0A087WWP4 248 259 RBM15 Putative RNA-binding protein 15 yes no 2 0.0034372 79.492 By MS/MS By MS/MS 2 2 985140000 538800000 446340000 5623 94 6396;6397 14101;14102;14103;14104 13650;13651 13650 171;172 2 SLSPGKENVSALDMEK IEPDKECKSLSPGKEN VSALDMEKESEEKEEK K S L E K E 1 0 1 1 0 0 2 1 0 0 2 2 1 0 1 3 0 0 0 1 0 0 16 1 1703.84 Q9H307 Q9H307 441 456 PNN Pinin yes yes 2;3 1.3374E-07 134.4 By MS/MS By MS/MS 4 2 149310000 119100000 30213000 5624 2826 6398;6399 14105;14106;14107;14108;14109;14110 13652;13653;13654;13655;13656;13657 13653 1126 5927;5928 6 SLSPGVSR SASSNSRKSLSPGVSR SLSPGVSRDSSTSYTE K S L S R D 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 3 0 0 0 1 0 0 8 0 801.43447 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 597 604 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0068404 90.149 By MS/MS By MS/MS 2 3 126460000 46482000 79981000 5625 810 6400;6401 14111;14112;14113;14114;14115 13658;13659;13660;13661;13662;13663 13662 1460;1461 6 SLSPILPGR ESTSRNRRSLSPILPG LSPILPGRHSPAPPPD R S L G R H 0 1 0 0 0 0 0 1 0 1 2 0 0 0 2 2 0 0 0 0 0 0 9 0 938.55492 M0QZS0;Q6ZSZ5;A0A087WZG4 M0QZS0 740 748 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes no 2 0.0056585 85.533 By MS/MS By MS/MS 1 1 15669000 7956600 7712200 5626 1416 6402 14116;14117 13664;13665 13664 2597 2 SLSPNHNTLQTLK LRSDSHSRSLSPNHNT HNTLQTLKSDGRMPSS R S L L K S 0 0 2 0 0 1 0 0 1 0 3 1 0 0 1 2 2 0 0 0 0 0 13 0 1451.7732 O75592 O75592 2749 2761 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 0.0007802 98.253 By MS/MS By MS/MS 1 1 30558000 16101000 14457000 5627 1550 6403 14118;14119 13666;13667 13667 2937 2 SLSPSHLTEDR VVRPQESRSLSPSHLT PSHLTEDRQGRWKEED R S L D R Q 0 1 0 1 0 0 1 0 1 0 2 0 0 0 1 3 1 0 0 0 0 0 11 0 1240.6048 Q5T200 Q5T200 875 885 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2;3 0.0021188 92.792 By MS/MS By MS/MS 2 2 172420000 91829000 80588000 5628 2238 6404 14120;14121;14122;14123 13668;13669;13670;13671 13668 4483 4 SLSQGSTNSNMLDVQGGAHK PAMMFRQRSLSQGSTN DVQGGAHKKRARRSSL R S L H K K 1 0 2 1 0 2 0 3 1 0 2 1 1 0 0 4 1 0 0 1 0 0 20 0 2029.9487 B7Z7Y1;E9PCH4;Q8TEU7 B7Z7Y1 1068 1087 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 3 0.0047585 58.418 By MS/MS By MS/MS 1 1 4691800 2612700 2079100 5629 592 6405 14124;14125 13672;13673 13673 1081 2 SLSQPTPPPMPILSQSEAK KSRSGGRKSLSQPTPP ILSQSEAKNPRINQLS K S L A K N 1 0 0 0 0 2 1 0 0 1 2 1 1 0 5 4 1 0 0 0 0 0 19 0 2007.0347 H0Y390;H3BPE1;H3BQK9;Q9UPN3;H0Y314 H0Y390 4013 4031 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 0.0013845 70.413 By MS/MS By MS/MS 1 2 27309000 11920000 15390000 5630 1115 6406;6407 14126;14127;14128 13674;13675 13674 404 2109 2 SLSQSFENLLDEPAYGLIQK LLVNCQNKSLSQSFEN PAYGLIQKIKKDPYTA K S L Q K I 1 0 1 1 0 2 2 1 0 1 4 1 0 1 1 3 0 0 1 0 0 0 20 0 2251.1372 C9JA93 C9JA93 102 121 TBC1D15 yes yes 2 1.4528E-06 130.66 By MS/MS By matching 1 1 19564000 14110000 5454100 5631 652 6408 14129;14130 13676 13676 8089 1 SLSRPSSLIEQEK LSERALTRSLSRPSSL SSLIEQEKQRSLEKQR R S L E K Q 0 1 0 0 0 1 2 0 0 1 2 1 0 0 1 4 0 0 0 0 0 0 13 1 1472.7835 Q12802;A0A087WTD7;A8MYJ1 Q12802 2561 2573 AKAP13 A-kinase anchor protein 13 yes no 2 0.0026885 91.307 By MS/MS By MS/MS 1 1 39705000 17897000 21808000 5632 2026 6409 14131;14132 13677;13678 13677 3943 2 SLSSDSTLLLFK VGFLSVPKSLSSDSTL DSTLLLFKDSSSKMGY K S L F K D 0 0 0 1 0 0 0 0 0 0 4 1 0 1 0 4 1 0 0 0 0 0 12 0 1309.7129 Q9HAW4 Q9HAW4 718 729 CLSPN Claspin yes yes 2 6.1714E-14 154.67 By MS/MS By MS/MS 1 2 9616700 4858300 4758400 5633 2861 6410 14133;14134;14135 13679;13680 13679 6026 2 SLSSGSNFCSEQK SLVKKKERSLSSGSNF SNFCSEQKTSGIINKF R S L Q K T 0 0 1 0 1 1 1 1 0 0 1 1 0 1 0 5 0 0 0 0 0 0 13 0 1429.6144 O95243 O95243 316 328 MBD4 Methyl-CpG-binding domain protein 4 yes yes 2 0.0013932 108.36 By MS/MS 1 7753500 0 7753500 5634 1586 6411 14136 13681 13681 3005 1 SLSSPPSSKRPK NSGVNLQRSLSSPPSS PPSSKRPKTISIDENM R S L P K T 0 1 0 0 0 0 0 0 0 0 1 2 0 0 3 5 0 0 0 0 0 0 12 2 1269.7041 Q5VW31;A0A1B0GWB8;A0A1B0GW37;U3KQE8;A0A1B0GVN4;A0A1B0GWJ4;A0A0A0MRX8;A0A1B0GU97;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712 Q5VW31 10 21 NFIB Nuclear factor 1;Nuclear factor 1 B-type yes no 2 0.017561 69.352 By MS/MS 1 0 0 0 5635 235 6412 14137 13682 13682 411;412 1 SLSSPTVTLSAPLEGAK EPQIRRPRSLSSPTVT SAPLEGAKDSPVRRAV R S L A K D 2 0 0 0 0 0 1 1 0 0 3 1 0 0 2 4 2 0 0 1 0 0 17 0 1656.8934 A0A1B0GVY1;Q96PU5 A0A1B0GVY1 725 741 NEDD4L E3 ubiquitin-protein ligase NEDD4-like yes no 2 2.6829E-42 176.42 By MS/MS By MS/MS 1 1 112800000 69389000 43407000 5636 431 6413 14138;14139 13683;13684;13685 13684 805 3 SLSSSLDDTEVK TETPIVSKSLSSSLDD SLDDTEVKKVMEECKR K S L V K K 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 4 1 0 0 1 0 0 12 0 1279.6143 O95292 O95292 156 167 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 1.4404E-06 129.76 By MS/MS By MS/MS 2 1 263990000 128180000 135810000 5637 1588 6414 14140;14141;14142 13686;13687;13688 13687 3009;3010 3 SLSSSLDDTEVKK TETPIVSKSLSSSLDD LDDTEVKKVMEECKRL K S L K K V 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 4 1 0 0 1 0 0 13 1 1407.7093 O95292 O95292 156 168 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2;3 4.1496E-11 144.51 By MS/MS By MS/MS 2 1 70268000 39258000 31010000 5638 1588 6415 14143;14144;14145 13689;13690;13691 13689 3009;3010 2 SLSSSPQAQPPRPAELSDEEVAELFQR ESSAVPARSLSSSPQA EVAELFQRLAETQQEK R S L Q R L 3 2 0 1 0 3 4 0 0 0 3 0 0 1 4 5 0 0 0 1 0 0 27 1 2967.4574 A0A075B793;Q4V328;A0A087WXA6;A0A087WT45 A0A075B793 657 683 GRIPAP1 GRIP1-associated protein 1 yes no 3 0.00093631 61.525 By matching By MS/MS 1 1 54286000 23477000 30809000 5639 21 6416 14146;14147 13692 13692 42 1 SLSTSGESLYHVLGLDK ________________ YHVLGLDKNATSDDIK R S L D K N 0 0 0 1 0 0 1 2 1 0 4 1 0 0 0 4 1 0 1 1 0 0 17 0 1804.9207 Q9H3Z4 Q9H3Z4 8 24 DNAJC5 DnaJ homolog subfamily C member 5 yes yes 2;3 4.3682E-77 205.98 By MS/MS 2 308440000 0 308440000 5640 2831 6417 14148;14149 13693;13694 13693 5938 2 SLSTSGESLYHVLGLDKNATSDDIKK ________________ ATSDDIKKSYRKLALK R S L K K S 1 0 1 3 0 0 1 2 1 1 4 3 0 0 0 5 2 0 1 1 0 0 26 2 2777.4083 Q9H3Z4 Q9H3Z4 8 33 DNAJC5 DnaJ homolog subfamily C member 5 yes yes 4 0.014666 48.077 By MS/MS By matching 1 1 12998000 5795700 7202600 5641 2831 6418 14150;14151 13695 13695 5938 1 SLSVGLEK GFAQELSRSLSVGLEK SLSVGLEKNLKKKDGS R S L E K N 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 8 0 831.47018 I3L1Z8;I3L1A6;Q8N137 I3L1Z8 78 85 CNTROB Centrobin yes no 2 0.01338 79.986 By MS/MS 1 2278100 2278100 0 5642 1304 6419 14152 13696;13697 13696 2424 2 SLSVPAASTAKPPPLPR HRDTALYKSLSVPAAS AKPPPLPRSNTDSAVV K S L P R S 3 1 0 0 0 0 0 0 0 0 2 1 0 0 5 3 1 0 0 1 0 0 17 1 1687.9621 H3BMQ0;P49815 H3BMQ0 1219 1235 TSC2 Tuberin yes no 3 0.014104 69.361 By MS/MS 1 0 0 0 5643 1230 6420 14153 13698 13698 2292 1 SLSVPVDLSR PPSKRHCRSLSVPVDL SVPVDLSRWQPVWRPA R S L S R W 0 1 0 1 0 0 0 0 0 0 2 0 0 0 1 3 0 0 0 2 0 0 10 0 1071.5924 Q9NYF3;D6RHW3 Q9NYF3 120 129 FAM53C Protein FAM53C yes no 2 0.014134 69.864 By MS/MS By MS/MS 1 1 59583000 33170000 26413000 5644 2946 6421 14154;14155 13699;13700 13699 6210 2 SLSVQNLIR MVPKDLGKSLSVQNLI LSVQNLIRSTEELNIQ K S L I R S 0 1 1 0 0 1 0 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 9 0 1028.5978 A0A0A0MT07;A0A0A0MSC0;F8WEA4;A0A0A0MSD9;A0A0A0MRC8;Q9NR82 A0A0A0MT07 719 727 KCNQ5 Potassium voltage-gated channel subfamily KQT member 5 yes no 2 0.0010131 120.06 By MS/MS By MS/MS 1 1 4749300 2201400 2548000 5645 208 6422 14156;14157 13701;13702 13702 372 2 SLSYEEPR PIRQGVVRSLSYEEPR SLSYEEPRRHSPPIEK R S L P R R 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 2 0 0 1 0 0 0 8 0 979.46108 F5GZK9;Q8IZD4 F5GZK9 147 154 DCP1B mRNA-decapping enzyme 1B yes no 2 0.013109 80.916 By MS/MS By MS/MS 1 1 83577000 44236000 39341000 5646 954 6423 14158;14159 13703;13704 13703 1795 2 SLSYSPVER IDSLRDSRSLSYSPVE LSYSPVERRRPSPQPS R S L E R R 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 1 1 0 0 9 0 1036.5189 Q9UQ35;I3L4U6 Q9UQ35 2690 2698 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0027908 100.09 By MS/MS By MS/MS 5 4 531580000 272210000 259380000 5647 3074 6424;6425;6426 14160;14161;14162;14163;14164;14165;14166;14167;14168 13705;13706;13707;13708;13709;13710;13711;13712;13713;13714;13715 13708 6573;6574;6575 11 SLTELVQQPCPPIEASK MSSSESVKSLTELVQQ CPPIEASKDSKPPEPS K S L S K D 1 0 0 0 1 2 2 0 0 1 2 1 0 0 3 2 1 0 0 1 0 0 17 0 1895.9663 P39880 P39880 1069 1085 CUX1 Homeobox protein cut-like 1 yes yes 2 0.0030608 91.065 By MS/MS 1 6230600 6230600 0 5648 1809 6427 14169 13716 13716 7439 1 SLTNDWEDHLAVK EEYGEFYKSLTNDWED WEDHLAVKHFSVEGQL K S L V K H 1 0 1 2 0 0 1 0 1 0 2 1 0 0 0 1 1 1 0 1 0 0 13 0 1526.7365 P07900;P08238 P08238 307 319 HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 2 9.4484E-06 108.7 By MS/MS 1 2919100 0 2919100 5649 1658;1656 6428 14170 13717 13717 0 SLTNSHLEK ISDRESRRSLTNSHLE LTNSHLEKKKCDEYIP R S L E K K 0 0 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 9 0 1027.5298 F8VX12;F8VX04;Q9H2H9 F8VX12 52 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 2 0.0073333 96.334 By MS/MS By MS/MS 2 1 293590000 175670000 117920000 5650 1024 6429;6430 14171;14172;14173 13718;13719;13720 13719 1916;1917;7156 3 SLTNSHLEKK ISDRESRRSLTNSHLE TNSHLEKKKCDEYIPG R S L K K K 0 0 1 0 0 0 1 0 1 0 2 2 0 0 0 2 1 0 0 0 0 0 10 1 1155.6248 F8VX12;F8VX04;Q9H2H9 F8VX12 52 61 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 3 0.015354 53.252 By matching By MS/MS 1 1 7705300 5098400 2606900 5651 1024 6431 14174;14175 13721 13721 1916;1917;7156 1 SLTSSLENIFSR ILKNKAKRSLTSSLEN SLENIFSRGANRMRGR R S L S R G 0 1 1 0 0 0 1 0 0 1 2 0 0 1 0 4 1 0 0 0 0 0 12 0 1352.6936 Q5JU47;O60343 Q5JU47 78 89 TBC1D4 TBC1 domain family member 4 yes no 2 3.6093E-35 188.96 By MS/MS By MS/MS 1 2 42140000 22240000 19900000 5652 1517 6432 14176;14177;14178 13722;13723;13724 13724 2865;2866;2867 3 SLTVSDDAESSEPER RRGRKPKRSLTVSDDA AESSEPERKRQKSVSD R S L E R K 1 1 0 2 0 0 3 0 0 0 1 0 0 0 1 4 1 0 0 1 0 0 15 0 1620.7115 H0Y9Y2;Q8NFC6 Q8NFC6 2954 2968 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 no no 2 0.00031276 114.27 By MS/MS By MS/MS 2 2 26476000 13156000 13320000 5653 2517;1155 6433 14179;14180;14181;14182 13725;13726;13727;13728 13725 2191;2192;7207 4 SLVESVSSSPNKESNEEEQVWHFLGK RCTQEEARSLVESVSS QVWHFLGK________ R S L G K - 0 0 2 0 0 1 5 1 1 0 2 2 0 1 1 6 0 1 0 3 0 0 26 1 2945.4043 Q9H2U2 Q9H2U2 309 334 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes yes 3 5.8836E-06 84.573 By MS/MS By MS/MS 1 1 31985000 12917000 19068000 5654 2823 6434 14183;14184 13729;13730;13731 13730 5914;5915;5916 2 SLVGSWLK RSLSGTGRSLVGSWLK SLVGSWLKLNRADGNF R S L L K L 0 0 0 0 0 0 0 1 0 0 2 1 0 0 0 2 0 1 0 1 0 0 8 0 888.5069 B0QY16;Q6ICG6 B0QY16 243 250 KIAA0930 Uncharacterized protein KIAA0930 yes no 2 0.0028 115.23 By MS/MS By MS/MS 1 1 16845000 11830000 5014800 5655 512 6435 14185;14186 13732;13733 13732 970 2 SLVGTPYWMAPELISR SKEVPRRKSLVGTPYW MAPELISRLPYGPEVD K S L S R L 1 1 0 0 0 0 1 1 0 1 2 0 1 0 2 2 1 1 1 1 0 0 16 0 1818.9338 O96013;M0R1R1 O96013 474 489 PAK4 Serine/threonine-protein kinase PAK 4 yes no 2 1.6842E-42 176.08 By MS/MS By MS/MS 2 2 199740000 123990000 75751000 5656 1617 6436;6437 14187;14188;14189;14190 13734;13735;13736;13737 13734 580 3063;7362 4 SLVHRLSDGDMTSALR SAAGEGNRSLVHRLSD GDMTSALRGVADDQGQ R S L L R G 1 2 0 2 0 0 0 1 1 0 3 0 1 0 0 3 1 0 0 1 0 0 16 1 1756.889 Q8WXE1 Q8WXE1 512 527 ATRIP ATR-interacting protein yes yes 3 0.016385 54.281 By MS/MS By MS/MS 1 1 12092000 5191500 6900900 5657 2569 6438 14191;14192 13738;13739 13739 5266 2 SLYASSPGGVYATR ALRPSTSRSLYASSPG PGGVYATRSSAVRLRS R S L T R S 2 1 0 0 0 0 0 2 0 0 1 0 0 0 1 3 1 0 2 1 0 0 14 0 1427.7045 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 P08670 51 64 VIM Vimentin yes no 2;3 1.3266E-20 157.2 By MS/MS By MS/MS 5 5 1423300000 729680000 693580000 5658 1663 6439;6440 14193;14194;14195;14196;14197;14198;14199;14200;14201;14202 13740;13741;13742;13743;13744;13745;13746;13747;13748;13749 13743 3137;3138;8224 10 SLYDEVAAQGEVVR SASILESKSLYDEVAA AAQGEVVRKLKAEKSP K S L V R K 2 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 3 0 0 14 0 1534.7627 V9GYZ6;P07814 V9GYZ6 832 845 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2 0.0087027 78.903 By MS/MS 1 0 0 0 5659 1655 6441 14203 13750 13750 8222 1 SLYESFVSSSDR SSRRPQRKSLYESFVS SFVSSSDRLRELGPDG K S L D R L 0 1 0 1 0 0 1 0 0 0 1 0 0 1 0 5 0 0 1 1 0 0 12 0 1375.6256 P18615;A0A0A0MT02;A2ABK4 P18615 131 142 NELFE Negative elongation factor E yes no 2 0.00076668 103.14 By MS/MS By MS/MS 1 1 15078000 6734900 8343200 5660 1726 6442 14204;14205 13751;13752 13751 3253 2 SLYGDVDSPLPTGEAGGPPSTR EQELQKYKSLYGDVDS AGGPPSTREAELKLRL K S L T R E 1 1 0 2 0 0 1 4 0 0 2 0 0 0 4 3 2 0 1 1 0 0 22 0 2172.0335 Q9Y4B5;J3QL92 Q9Y4B5 542 563 MTCL1 Microtubule cross-linking factor 1 yes no 2;3 0.00010167 94.911 By MS/MS By MS/MS 1 2 11069000 6363200 4705300 5661 3118 6443 14206;14207;14208 13753;13754;13755;13756 13755 6681 4 SMDLGIADETK FVKTRKSKSMDLGIAD LGIADETKLNTVDDQK K S M T K L 1 0 0 2 0 0 1 1 0 1 1 1 1 0 0 1 1 0 0 0 0 0 11 0 1178.5489 Q5VWV2;Q8TEW0 Q5VWV2 792 802 PARD3 Partitioning defective 3 homolog yes no 2 0.023893 62.298 By MS/MS 1 3603700 3603700 0 5662 2278 6444 14209 13757 13757 4575 1 SMEVLSVTDGGSPVPAR GKRRPERKSMEVLSVT GGSPVPARRAIEMAQH K S M A R R 1 1 0 1 0 0 1 2 0 0 1 0 1 0 2 3 1 0 0 3 0 0 17 0 1700.8403 Q8IWQ3 Q8IWQ3 382 398 BRSK2 Serine/threonine-protein kinase BRSK2 yes yes 2 0.00069091 82.349 By MS/MS By MS/MS 1 1 11823000 7601400 4221900 5663 2430 6445 14210;14211 13758;13759 13758 985 4971 2 SMGETESGDAFLDLK ________________ GDAFLDLKKPPASKCP R S M L K K 1 0 0 2 0 0 2 2 0 0 2 1 1 1 0 2 1 0 0 0 0 0 15 0 1598.7134 Q9NRA8;B1AKL4;B1AKL6;B1AKL5 Q9NRA8 5 19 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 2 0.021859 50.158 By MS/MS 1 2598300 0 2598300 5664 2906 6446 14212 13760 13760 1152 6129 1 SMGFLSIK FLNKGLSKSMGFLSIK SMGFLSIKDTQDENYF K S M I K D 0 0 0 0 0 0 0 1 0 1 1 1 1 1 0 2 0 0 0 0 0 0 8 0 881.46807 Q12923 Q12923 240 247 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.0068993 95.775 By MS/MS By MS/MS 2 1 0 0 0 5665 2034 6447;6448 14213;14214;14215 13761;13762;13763 13762 811 3988 3 SMGTGDTPGLEVPSSPLR TRTRPVTRSMGTGDTP EVPSSPLRKAKRARLC R S M L R K 0 1 0 1 0 0 1 3 0 0 2 0 1 0 3 3 2 0 0 1 0 0 18 0 1799.8724 C9J0I9;Q86WB0 C9J0I9 338 355 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 5.3717E-108 225.17 By MS/MS By MS/MS 3 3 264050000 144600000 119450000 5666 624 6449;6450 14216;14217;14218;14219;14220;14221 13764;13765;13766;13767;13768;13769 13764 242 1156;1157 6 SMGTGDTPGLEVPSSPLRK TRTRPVTRSMGTGDTP VPSSPLRKAKRARLCS R S M R K A 0 1 0 1 0 0 1 3 0 0 2 1 1 0 3 3 2 0 0 1 0 0 19 1 1927.9673 C9J0I9;Q86WB0 C9J0I9 338 356 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 3.571E-72 199.91 By MS/MS By MS/MS 3 3 255200000 130450000 124750000 5667 624 6451;6452 14222;14223;14224;14225;14226;14227 13770;13771;13772;13773;13774;13775 13770 242 1156;1157 6 SMNSARVGSQDTGAGGAGR ICNHRRPRSMNSARVG TGAGGAGRAWGSHTTA R S M G R A 3 2 1 1 0 1 0 5 0 0 0 0 1 0 0 3 1 0 0 1 0 0 19 1 1777.8126 F8VRH8 F8VRH8 39 57 GPR132 yes yes 2 0.023552 59.372 By MS/MS 1 0 0 0 5668 1004 6453 14228 13776 13776 1892;1893 1 SMSAPSDLEMIGNEDLEFTR VRQPVFLRSMSAPSDL NEDLEFTRANQRRRHV R S M T R A 1 1 1 2 0 0 3 1 0 1 2 0 2 1 1 3 1 0 0 0 0 0 20 0 2240.9929 F8VWT9;J3KPF0;Q9Y4D8 F8VWT9 1393 1412 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes no 3 0.001147 71.427 By matching By MS/MS 1 1 10536000 4279000 6257100 5669 1021 6454 14229;14230 13777 13777 368;369 1913;1914 1 SMSAPVIFDR IAPRIESKSMSAPVIF SAPVIFDRSREEIEEE K S M D R S 1 1 0 1 0 0 0 0 0 1 0 0 1 1 1 2 0 0 0 1 0 0 10 0 1121.5539 O60749;D6RC15 O60749 117 126 SNX2 Sorting nexin-2 yes no 2 0.0036074 97.163 By MS/MS By MS/MS 3 3 105530000 53295000 52237000 5670 1525 6455;6456 14231;14232;14233;14234;14235;14236 13778;13779;13780;13781;13782 13782 551 2879 5 SMSASSGLSAR KSRPEPGRSMSASSGL ASSGLSARSSAQNGSA R S M A R S 2 1 0 0 0 0 0 1 0 0 1 0 1 0 0 5 0 0 0 0 0 0 11 0 1052.4921 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25 H0Y7V8 879 889 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha yes no 2 0.0061197 81.95 By MS/MS By MS/MS 2 1 9495500 7029300 2466200 5671 218 6457 14237;14238;14239 13783;13784;13785 13783 90 381 2 SMSFQGIR LLLSVQKRSMSFQGIR SMSFQGIRQPVTVTEL R S M I R Q 0 1 0 0 0 1 0 1 0 1 0 0 1 1 0 2 0 0 0 0 0 0 8 0 924.44874 P15924 P15924 2207 2214 DSP Desmoplakin yes yes 2 0.0059422 94.262 By MS/MS By MS/MS 2 2 213340000 105930000 107400000 5672 1708 6458;6459 14240;14241;14242;14243 13786;13787;13788;13789 13787 640 3212;3213 4 SMSHQAAIASQR RKGDIVRKSMSHQAAI QAAIASQRFEGTTSLG K S M Q R F 3 1 0 0 0 2 0 0 1 1 0 0 1 0 0 3 0 0 0 0 0 0 12 0 1285.6197 Q4G0F5 Q4G0F5 302 313 VPS26B Vacuolar protein sorting-associated protein 26B yes yes 2;3 0.0054108 64.52 By MS/MS By MS/MS 2 2 20643000 12356000 8287000 5673 2193 6460;6461 14244;14245;14246;14247 13790;13791 13791 877 4368;4369 2 SMSIDDTPR DQDDLKRRSMSIDDTP MSIDDTPRGSWACSIF R S M P R G 0 1 0 2 0 0 0 0 0 1 0 0 1 0 1 2 1 0 0 0 0 0 9 0 1020.4546 Q96N67;A0A1B0GUE9;A0A0C4DGY6;A0A1B0GVW2 Q96N67 180 188 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.0018017 112.85 By MS/MS By MS/MS 2 2 96581000 44389000 52192000 5674 2689 6462;6463 14248;14249;14250;14251 13792;13793;13794;13795;13796 13796 1068 5556 5 SMSRNPFAHVQLKPTVTNDR GLDDYGARSMSRNPFA KPTVTNDRSAPLLS__ R S M D R S 1 2 2 1 0 1 0 0 1 0 1 1 1 1 2 2 2 0 0 2 0 0 20 2 2297.1699 I3L3C6;Q9UQB8 I3L3C6 191 210 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 3 0.031915 41.257 By MS/MS 1 10161000 10161000 0 5675 1312 6464 14252 13797 13797 0 SMSVDLSHIPLKDPLLFK VNHMSDNRSMSVDLSH LKDPLLFKSASDTNLQ R S M F K S 0 0 0 2 0 0 0 0 1 1 4 2 1 1 2 3 0 0 0 1 0 0 18 1 2039.1125 A0A0C4DGH6;A0JNW5 A0A0C4DGH6 583 600 UHRF1BP1L UHRF1-binding protein 1-like yes no 3 0.0016395 76.329 By MS/MS By MS/MS 1 1 12762000 8330400 4431500 5676 320 6465 14253;14254 13798;13799 13799 125 562;563 2 SMVSPVPSPTGTISVPNSCPASPR HIPEPDLRSMVSPVPS NSCPASPRGAGSSSYR R S M P R G 1 1 1 0 1 0 0 1 0 1 0 0 1 0 6 6 2 0 0 3 0 0 24 0 2424.1777 P85037;U3KQ26 P85037 236 259 FOXK1 Forkhead box protein K1 yes no 2;3 0.017561 44.184 By MS/MS By MS/MS 1 2 28365000 10767000 17598000 5677 1968 6466;6467 14255;14256;14257 13800;13801 13801 776 3764;3765;3766 2 SNDSGEEAEKEFIFV KDGHQGSKSNDSGEEA AEKEFIFV________ K S N F V - 1 0 1 1 0 0 4 1 0 1 0 1 0 2 0 2 0 0 0 1 0 0 15 1 1699.7577 Q5VZK9 Q5VZK9 1357 1371 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 2 1.3266E-06 127.49 By MS/MS By MS/MS 1 1 33498000 24853000 8645000 5678 2282 6468 14258;14259 13802;13803 13802 4588 2 SNESEGSMNSNQQLFK DNEMKKGKSNESEGSM NSNQQLFKIPLEEFKL K S N F K I 0 0 3 0 0 2 2 1 0 0 1 1 1 1 0 4 0 0 0 0 0 0 16 0 1798.7792 B5MCY1 B5MCY1 1502 1517 TDRD15 Tudor domain-containing protein 15 yes yes 2 0.019891 61.344 By MS/MS By matching 1 1 11613000 4596600 7016400 5679 579 6469 14260;14261 13804 13804 1061 0 SNILSDNPDFSDEADIIK QMWLEENRSNILSDNP SDEADIIKEGMIRFRV R S N I K E 1 0 2 4 0 0 1 0 0 3 1 1 0 1 1 3 0 0 0 0 0 0 18 0 1991.9324 O75717 O75717 1031 1048 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.0025471 78.486 By MS/MS 1 5725100 5725100 0 5680 1555 6470 14262 13805 13805 2941 1 SNILWDKEHIYDEQPPNVEEWVK RKMDRYDKSNILWDKE PNVEEWVKNVSAGTQD K S N V K N 0 0 2 2 0 1 4 0 1 2 1 2 0 0 2 1 0 2 1 2 0 0 23 1 2867.3766 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 277 299 OCLN Occludin yes no 3 7.5174E-05 110.34 By MS/MS By MS/MS 1 1 30484000 16716000 13769000 5681 357 6471 14263;14264 13806;13807 13806 8030 2 SNISPNFNFMGQLLDFER YDIVKMKKSNISPNFN GQLLDFERTLGLSSPC K S N E R T 0 1 3 1 0 1 1 1 0 1 2 0 1 3 1 2 0 0 0 0 0 0 18 0 2128.0048 F8VW29;Q16828;Q99956;Q16829 F8VW29 203 220 DUSP6;DUSP9;DUSP7 Dual specificity protein phosphatase 6;Dual specificity protein phosphatase 9;Dual specificity protein phosphatase 7 yes no 2 1.1823E-06 126.26 By MS/MS By MS/MS 1 1 53543000 30726000 22817000 5682 1016 6472 14265;14266 13808;13809 13808 366 1902;1903 2 SNMSPHGLPAR GERPGPNRSNMSPHGL SPHGLPARSSGSPKFA R S N A R S 1 1 1 0 0 0 0 1 1 0 1 0 1 0 2 2 0 0 0 0 0 0 11 0 1165.5662 H0Y4T7;E7ESY4;Q13330 H0Y4T7 238 248 MTA1 Metastasis-associated protein MTA1 yes no 2 0.015356 55.084 By MS/MS By MS/MS 1 1 68856000 35895000 32961000 5683 818 6473 14267;14268 13810;13811 13811 305 1483 2 SNNWSLEDVTASDK ATPFTDIKSNNWSLED EDVTASDKNYVAGLID K S N D K N 1 0 2 2 0 0 1 0 0 0 1 1 0 0 0 3 1 1 0 1 0 0 14 0 1564.7005 Q14680 Q14680 352 365 MELK Maternal embryonic leucine zipper kinase yes yes 2 0.0016353 89.232 By matching By MS/MS 1 1 9263900 4333900 4930000 5684 2101 6474 14269;14270 13812 13812 4155 1 SNPSIQATLNK SSGLQSSRSNPSIQAT SIQATLNKTVLSSSLN R S N N K T 1 0 2 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 11 0 1171.6197 Q6UUV7 Q6UUV7 329 339 CRTC3 CREB-regulated transcription coactivator 3 yes yes 2 0.0071639 77.74 By MS/MS By matching 1 1 19220000 10499000 8721000 5685 2339 6475 14271;14272 13813 13813 4727 1 SNPTPMEPTSPGEHQQNSK LNHIKDEKSNPTPMEP GEHQQNSKLVLAESPQ K S N S K L 0 0 2 0 0 2 2 1 1 0 0 1 1 0 4 3 2 0 0 0 0 0 19 0 2064.9171 E7EUR8;A0A1B0GVL4;P78312 E7EUR8 974 992 FAM193A Protein FAM193A yes no 3 0.021224 43.752 By MS/MS 1 5363400 0 5363400 5686 429 6476 14273 13814 13814 166 1 SNQIPTEVR KEQLKIRKSNQIPTEV NQIPTEVRSKAEEVVS K S N V R S 0 1 1 0 0 1 1 0 0 1 0 0 0 0 1 1 1 0 0 1 0 0 9 0 1042.5407 Q9BWH2 Q9BWH2 151 159 FUNDC2 FUN14 domain-containing protein 2 yes yes 2 0.0062393 84.479 By MS/MS By MS/MS 1 1 335460000 168010000 167450000 5687 2765 6477 14274;14275 13815;13816 13815 5757 2 SNQNGKDSKPSSTPR TPAKNAQKSNQNGKDS SKPSSTPRSKGQESFK K S N P R S 0 1 2 1 0 1 0 1 0 0 0 2 0 0 2 4 1 0 0 0 0 0 15 2 1601.7758 P06748 P06748 207 221 NPM1 Nucleophosmin yes yes 3 0.0027279 73.722 By MS/MS 1 8941200 0 8941200 5688 1647 6478 14276 13817 13817 69 3111;3112;7375 1 SNSAPLIHGLSDTSPVFQAEAPSAR GGGGGLRRSNSAPLIH QAEAPSARRNSTTFPS R S N A R R 4 1 1 1 0 1 1 1 1 1 2 0 0 1 3 5 1 0 0 1 0 0 25 0 2551.2667 Q96E09 Q96E09 35 59 FAM122A Protein FAM122A yes yes 3 0.0001913 74.28 By MS/MS By MS/MS 2 2 215620000 104070000 111550000 5689 2640 6479;6480 14277;14278;14279;14280 13818;13819;13820 13819 5440;5441;5442;7783 3 SNSAWQIYLQR QAVRARPRSNSAWQIY AWQIYLQRRAERGTPK R S N Q R R 1 1 1 0 0 2 0 0 0 1 1 0 0 0 0 2 0 1 1 0 0 0 11 0 1364.6837 Q8N4C8 Q8N4C8 699 709 MINK1 Misshapen-like kinase 1 yes yes 2 7.2936E-07 148.89 By MS/MS By MS/MS 1 1 16206000 10720000 5486200 5690 2471 6481 14281;14282 13821;13822;13823 13823 5055 3 SNSDVTISDIDAEDVLDQNAVNPNTGAALHR GLHPIRQRSNSDVTIS NTGAALHREYGSTSSI R S N H R E 4 1 4 5 0 1 1 1 1 2 2 0 0 0 1 3 2 0 0 3 0 0 31 0 3250.5338 Q9P2F8 Q9P2F8 160 190 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 3 0.00025733 60.574 By MS/MS By matching 1 1 18077000 6784900 11292000 5691 2980 6482 14283;14284 13824 13824 6276 1 SNSEGDLDGLILK MNFVPLRKSNSEGDLD DLDGLILKHHLDLLIP K S N L K H 0 0 1 2 0 0 1 2 0 1 3 1 0 0 0 2 0 0 0 0 0 0 13 0 1359.6882 F5H1B1;F5H630;P51523 F5H1B1 126 138 ZNF84 Zinc finger protein 84 yes no 2 4.1434E-07 132.65 By MS/MS By MS/MS 1 1 12178000 7015900 5162200 5692 959 6483 14285;14286 13825;13826;13827 13825 1806 3 SNSELEDEILCLEK ATCEKLNRSNSELEDE DEILCLEKELKEEKSK R S N E K E 0 0 1 1 1 0 4 0 0 1 3 1 0 0 0 2 0 0 0 0 0 0 14 0 1677.7767 G3V5K6;G3V599;Q8IX94;Q86UF2;P0CG41;A4D2H0;O15320;Q96PC5;A4FU28 G3V5K6 99 112 CTAGE5;CTAGE4;CTAGE6;CTAGE8;CTAGE15;MIA2;CTAGE9 cTAGE family member 4;cTAGE family member 6;cTAGE family member 8;cTAGE family member 15;cTAGE family member 5;Melanoma inhibitory activity protein 2;cTAGE family member 9 yes no 2 1.833E-177 241.64 By MS/MS 1 0 0 0 5693 459 6484 14287 13828 13828 855;856 1 SNSEVEDVGPTSHNR KKQGMKKRSNSEVEDV VGPTSHNRKKARWDTL R S N N R K 0 1 2 1 0 0 2 1 1 0 0 0 0 0 1 3 1 0 0 2 0 0 15 0 1626.7234 Q13206 Q13206 829 843 DDX10 Probable ATP-dependent RNA helicase DDX10 yes yes 2;3 0.0032149 82.121 By MS/MS By MS/MS 2 2 55795000 29163000 26632000 5694 2049 6485 14288;14289;14290;14291 13829;13830;13831;13832 13830 4022 4 SNSFNNPLGNR WQPNIPVRSNSFNNPL FNNPLGNRASHSANSQ R S N N R A 0 1 4 0 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 11 0 1218.5741 O95835 O95835 462 472 LATS1 Serine/threonine-protein kinase LATS1 yes yes 2 6.6826E-14 163.71 By MS/MS By MS/MS 1 1 100280000 50561000 49716000 5695 1611 6486 14292;14293 13833;13834 13834 3055 2 SNSGLATYSPPMGPVSER GGVCLQQRSNSGLATY PMGPVSERKGSMISVM R S N E R K 1 1 1 0 0 0 1 2 0 0 1 0 1 0 3 4 1 0 1 1 0 0 18 0 1848.8676 H0Y465;P21359;J3KSB5 H0Y465 522 539 NF1 Neurofibromin;Neurofibromin truncated yes no 2 1.6255E-05 124.42 By MS/MS By MS/MS 1 2 27087000 14194000 12893000 5696 1118 6487 14294;14295;14296 13835;13836;13837 13835 407 2124;7192 3 SNSGLGGEVSGVMSKPNVDPQPWFQDGPK PRQGGLPRSNSGLGGE PWFQDGPKSYLSSSAP R S N P K S 0 0 2 2 0 2 1 5 0 0 1 2 1 1 4 4 0 1 0 3 0 0 29 1 3013.424 C9JRJ5;Q9UGP4 C9JRJ5 314 342 LIMD1 LIM domain-containing protein 1 yes no 3 1.2482E-09 106.89 By MS/MS By MS/MS 2 2 153380000 81701000 71684000 5697 689 6488;6489 14297;14298;14299;14300 13838;13839;13840;13841 13839 269 1272 4 SNSGRELTDEEILASVMIK VMGPQRPRSNSGRELT ILASVMIKNLDTGEEI R S N I K N 1 1 1 1 0 0 3 1 0 2 2 1 1 0 0 3 1 0 0 1 0 0 19 1 2091.0518 Q5JSH3;H7BY83 Q5JSH3 342 360 WDR44 WD repeat-containing protein 44 yes no 3 0.00038554 106.31 By MS/MS By MS/MS 2 1 9750100 5370100 4380000 5698 2219 6490 14301;14302;14303 13842;13843 13842 887 4436 2 SNSIQQMEQLNR PAPQVLQRSNSIQQME QQMEQLNRRYQSIRRT R S N N R R 0 1 2 0 0 3 1 0 0 1 1 0 1 0 0 2 0 0 0 0 0 0 12 0 1446.6885 Q9P2P5 Q9P2P5 850 861 HECW2 E3 ubiquitin-protein ligase HECW2 yes yes 2 0.013733 56.956 By MS/MS By matching 1 1 5675600 3599200 2076400 5699 2986 6491 14304;14305 13844 13844 1183 6284 1 SNSLSEQLAINTSPDAVK GEPALRTKSNSLSEQL NTSPDAVKAKLISRMA K S N V K A 2 0 2 1 0 1 1 0 0 1 2 1 0 0 1 4 1 0 0 1 0 0 18 0 1872.9429 A0A0A0MT60;Q5T1M5;X6RKW4 A0A0A0MT60 369 386 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 0.00036206 114.56 By MS/MS By matching 1 1 33931000 21599000 12332000 5700 266 6492 14306;14307 13845 13845 469 1 SNSLVSTFTMEK TSHSTASRSNSLVSTF VSTFTMEKRGFYESLA R S N E K R 0 0 1 0 0 0 1 0 0 0 1 1 1 1 0 3 2 0 0 1 0 0 12 0 1342.6439 Q9HB21 Q9HB21 330 341 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 2 0.00041063 93.237 By matching By MS/MS 1 1 11824000 4689000 7135300 5701 2863 6493 14308;14309 13846 13846 1135 6030;6031 1 SNSMLELAPK GPVDPSNRSNSMLELA SMLELAPKVASPGSTI R S N P K V 1 0 1 0 0 0 1 0 0 0 2 1 1 0 1 2 0 0 0 0 0 0 10 0 1088.5536 A6PVU7;Q9P2M7;A2A3M4 A6PVU7 153 162 CGN Cingulin yes no 2 0.024867 47.606 By MS/MS 1 2811900 0 2811900 5702 488 6494 14310 13847 13847 190 889 1 SNSPLPVPPSK SRSRSQSRSNSPLPVP PLPVPPSKARSVSPPP R S N S K A 0 0 1 0 0 0 0 0 0 0 1 1 0 0 4 3 0 0 0 1 0 0 11 0 1121.6081 Q13247 Q13247 301 311 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 2 1.2306E-05 133.04 By MS/MS By MS/MS 3 3 600130000 313420000 286710000 5703 2053 6495 14311;14312;14313;14314;14315;14316 13848;13849;13850;13851;13852;13853;13854;13855;13856;13857;13858;13859;13860;13861;13862;13863;13864;13865;13866;13867;13868;13869 13853 4030;4031 22 SNSQSYIGRPIHLDK SFIGREKRSNSQSYIG GRPIHLDKILMSKVKV R S N D K I 0 1 1 1 0 1 0 1 1 2 1 1 0 0 1 3 0 0 1 0 0 0 15 1 1713.8798 Q15139;F8WBA3 Q15139 247 261 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 3 0.0057916 66.068 By MS/MS By MS/MS 1 1 37559000 24359000 13200000 5704 2129 6496 14317;14318 13870;13871 13870 4209 2 SNSRLEDQVIGVALQASK RYSQSVIRSNSRLEDQ GVALQASKKEESVVGS R S N S K K 2 1 1 1 0 2 1 1 0 1 2 1 0 0 0 3 0 0 0 2 0 0 18 1 1914.0171 Q2KHR3 Q2KHR3 613 630 QSER1 Glutamine and serine-rich protein 1 yes yes 3 1.4943E-10 139.04 By MS/MS By MS/MS 1 1 77195000 39515000 37680000 5705 2176 6497 14319;14320 13872;13873;13874 13873 4327;4328 3 SNSRLEDQVIGVALQASKK RYSQSVIRSNSRLEDQ VALQASKKEESVVGSV R S N K K E 2 1 1 1 0 2 1 1 0 1 2 2 0 0 0 3 0 0 0 2 0 0 19 2 2042.112 Q2KHR3 Q2KHR3 613 631 QSER1 Glutamine and serine-rich protein 1 yes yes 3 0.002433 77.894 By MS/MS By MS/MS 1 1 8633600 5625700 3007900 5706 2176 6498 14321;14322 13875;13876;13877 13876 4327;4328 3 SNSSEALLVDR LFVARTRRSNSSEALL SEALLVDRAAGGGAGS R S N D R A 1 1 1 1 0 0 1 0 0 0 2 0 0 0 0 3 0 0 0 1 0 0 11 0 1189.5939 Q96HB5 Q96HB5 358 368 CCDC120 Coiled-coil domain-containing protein 120 yes yes 2 9.9012E-06 128.35 By MS/MS By MS/MS 2 2 20254000 8436400 11818000 5707 2661 6499 14323;14324;14325;14326 13878;13879;13880;13881;13882 13879 5487 5 SNSTSSMSSGLPEQDR DTSKPFPRSNSTSSMS SGLPEQDRMAMTLPRN R S N D R M 0 1 1 1 0 1 1 1 0 0 1 0 1 0 1 6 1 0 0 0 0 0 16 0 1681.7213 P42684 P42684 781 796 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0018908 87.323 By MS/MS By MS/MS 2 2 22745000 10772000 11973000 5708 1828 6500;6501 14327;14328;14329;14330 13883;13884;13885 13884 693 3448;3449 3 SNSVEKPVSSILSR AGRKPWERSNSVEKPV PVSSILSRTPSVAKSP R S N S R T 0 1 1 0 0 0 1 0 0 1 1 1 0 0 1 5 0 0 0 2 0 0 14 1 1501.81 Q9UI08;H0YJN0 Q9UI08 329 342 EVL Ena/VASP-like protein yes no 3 0.0084186 61.657 By MS/MS By MS/MS 1 1 13069000 5036500 8032700 5709 3008 6502 14331;14332 13886;13887 13887 6338 2 SNSVGIQDAFNDGSDSTFQK PPLPGMSRSNSVGIQD GSDSTFQKRNSMTPNP R S N Q K R 1 0 2 3 0 2 0 2 0 1 0 1 0 2 0 4 1 0 0 1 0 0 20 0 2115.9345 O14497;H0Y488;A0A1B0GTU5;A0A087WUV6 O14497 1182 1201 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 3.8971E-16 147.9 By MS/MS By MS/MS 1 1 36144000 16908000 19236000 5710 1448 6503 14333;14334 13888;13889;13890 13888 2666;2667 3 SNSVGIQDAFNDGSDSTFQKR PPLPGMSRSNSVGIQD SDSTFQKRNSMTPNPG R S N K R N 1 1 2 3 0 2 0 2 0 1 0 1 0 2 0 4 1 0 0 1 0 0 21 1 2272.0356 O14497;H0Y488;A0A1B0GTU5;A0A087WUV6 O14497 1182 1202 ARID1A AT-rich interactive domain-containing protein 1A yes no 3 0.00015936 86.18 By MS/MS 1 16504000 0 16504000 5711 1448 6504 14335 13891 13891 2666;2667 1 SNSVSLVPPGSSHTLPR SNHLSLSKSNSVSLVP GSSHTLPRRAQSLKAP K S N P R R 0 1 1 0 0 0 0 1 1 0 2 0 0 0 3 5 1 0 0 2 0 0 17 0 1733.906 Q6R327 Q6R327 1282 1298 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2;3 0.0046218 66.939 By MS/MS By MS/MS 2 2 21021000 12754000 8266300 5712 2333 6505 14336;14337;14338;14339 13892;13893;13894 13894 4714 3 SNTEPQSPPIASPK DTSTWGLKSNTEPQSP SPPIASPKAITKPVRR K S N P K A 1 0 1 0 0 1 1 0 0 1 0 1 0 0 4 3 1 0 0 0 0 0 14 0 1451.7256 F8WF45;P82094 F8WF45 66 79 TMF1 TATA element modulatory factor yes no 2 0.00054829 110.57 By MS/MS By MS/MS 2 2 32524000 13162000 19362000 5713 1058 6506;6507 14340;14341;14342;14343 13895;13896;13897;13898;13899 13896 2002;2003 5 SNTIQSDGISDSEKCSPTVSQGKSSDCLNTVK FQEFGNRKSNTIQSDG SDCLNTVKSNSSSKAP K S N V K S 0 0 2 3 2 2 1 2 0 2 1 3 0 0 1 8 3 0 0 2 0 0 32 2 3428.5672 Q5SY34;O43781 Q5SY34 77 108 DYRK3 Dual specificity tyrosine-phosphorylation-regulated kinase 3 yes no 3 0.024726 43.306 By MS/MS 1 3636600 0 3636600 5714 1509 6508 14344 13900 13900 2837;2838 0 SNTISKPYISNTLPSDAPK KHRPTFTRSNTISKPY TLPSDAPKKRRAPLPP R S N P K K 1 0 2 1 0 0 0 0 0 2 1 2 0 0 3 4 2 0 1 0 0 0 19 1 2032.0477 A0A0X1KG75;A0A0D9SG04;Q53SF7;A0A0B4J1Z0 A0A0X1KG75 313 331 COBLL1 Cordon-bleu protein-like 1 yes no 2 0.024687 58.04 By MS/MS 1 0 0 0 5715 345 6509 14345 13901 13901 616;617;618 1 SNTLDIMDGR DRRGDRRRSNTLDIMD TLDIMDGRINHSSSLA R S N G R I 0 1 1 2 0 0 0 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 10 0 1120.5183 H0Y9X0;O94915 H0Y9X0 827 836 FRYL Protein furry homolog-like yes no 2 0.013815 64.827 By MS/MS 1 0 0 0 5716 1154 6510 14346 13902 13902 417 7205 1 SNTPILVDGK LHVALRNRSNTPILVD TPILVDGKDVMPEVNK R S N G K D 0 0 1 1 0 0 0 1 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1042.5659 K7EP41;K7EPY4;A0A0J9YXP8;A0A0J9YX90;A0A0J9YYH3;K7EQ48;A0A0A0MTS2;P06744 K7EP41 107 116 GPI Glucose-6-phosphate isomerase yes no 2 0.0084948 86.911 By MS/MS By matching 1 1 20114000 10819000 9294800 5717 279 6511 14347;14348 13903 13903 6918 1 SNVSDAVAQSTR EKLRGWLKSNVSDAVA DAVAQSTRIIYGGSVT K S N T R I 2 1 1 1 0 1 0 0 0 0 0 0 0 0 0 3 1 0 0 2 0 0 12 0 1233.5949 P60174 P60174 232 243 TPI1 Triosephosphate isomerase yes yes 2 0.0018502 99.343 By MS/MS By MS/MS 1 1 11449000 6262000 5187500 5718 1926 6512 14349;14350 13904;13905 13904 2 SNVSSPATPTASSSSSTTPTR VEGKRKRRSNVSSPAT SSSTTPTRKITESPRA R S N T R K 2 1 1 0 0 0 0 0 0 0 0 0 0 0 3 8 5 0 0 1 0 0 21 0 2021.9502 Q12888;A6NNK5;H7BZY0 Q12888 1631 1651 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2;3 0.010443 82.267 By MS/MS By MS/MS 2 2 40965000 23787000 17178000 5719 2031 6513 14351;14352;14353;14354 13906;13907;13908 13908 3968;3969;7538;7539 2 SPAGLQVLNDYLADK ________________ LNDYLADKSYIEGYVP K S P D K S 2 0 1 2 0 1 0 1 0 0 3 1 0 0 1 1 0 0 1 1 0 0 15 0 1602.8253 P24534;C9JZW3;F8WF65;F2Z2G2 P24534 8 22 EEF1B2 Elongation factor 1-beta yes no 2 3.1405E-130 242.4 By MS/MS By MS/MS 1 1 49390000 29503000 19887000 5720 1758 6514 14355;14356 13909;13910 13909 2 SPAGPAATPAQAQAASTPR LIFVDPNRSPAGPAAT AQAASTPRKARASEST R S P P R K 7 1 0 0 0 2 0 1 0 0 0 0 0 0 4 2 2 0 0 0 0 0 19 0 1748.8806 J3KQ96;E7ETY2;Q13428 J3KQ96 967 985 TCOF1 Treacle protein no no 2;3 8.8444E-05 120.56 By MS/MS By MS/MS 5 5 322520000 167750000 154770000 5721 822;2059 6515;6516 14357;14358;14359;14360;14361;14362;14363;14364;14365;14366 13911;13912;13913;13914;13915;13916;13917;13918;13919 13916 1508;1509;7090 9 SPALKSPLQSVVVR SELSPRERSPALKSPL PLQSVVVRRRSPRPSP R S P V R R 1 1 0 0 0 1 0 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 14 1 1479.8773 Q9Y2W1 Q9Y2W1 248 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 0.0003241 106.29 By MS/MS By MS/MS 2 2 95647000 55629000 40019000 5722 3096 6517 14367;14368;14369;14370 13920;13921;13922 13922 6646;6647 3 SPAPGAPTRSPSTPAK ANGTPTTKSPAPGAPT RSPSTPAKSPKLQKKN K S P A K S 3 1 0 0 0 0 0 1 0 0 0 1 0 0 5 3 2 0 0 0 0 0 16 1 1520.7947 Q9BQG0;I3L1L3 Q9BQG0 1232 1247 MYBBP1A Myb-binding protein 1A yes no 2 0.017369 94.454 By MS/MS By matching 1 1 20206000 10301000 9905000 5723 2741 6518 14371;14372 13923 13923 5691 1 SPARTPPSEEDSAEAER KEMPQDLRSPARTPPS EDSAEAERLKTEGNEQ R S P E R L 3 2 0 1 0 0 4 0 0 0 0 0 0 0 3 3 1 0 0 0 0 0 17 1 1827.8235 O43765;K7EMD6 O43765 77 93 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 3 4.2737E-06 109.48 By MS/MS By matching 2 1 20600000 15123000 5477000 5724 1508 6519;6520 14373;14374;14375 13924;13925;13926 13926 2834;7319 2 SPAVATSTAAPPPPSSPLPSK MEVFLQEKSPAVATST PSSPLPSKSTSAPQMS K S P S K S 4 0 0 0 0 0 0 0 0 0 1 1 0 0 7 5 2 0 0 1 0 0 21 0 1959.0313 F8W726;Q14157 F8W726 450 470 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 2.6811E-89 203.23 By MS/MS By MS/MS 2 4 1596500000 616390000 980120000 5725 1035 6521 14376;14377;14378;14379;14380;14381 13927;13928;13929;13930;13931;13932;13933;13934 13929 1947;1948 7 SPAYTPQNLDSESESGSSIAEK RGSPSHSKSPAYTPQN SGSSIAEKSYQNSPSS K S P E K S 2 0 1 1 0 1 3 1 0 1 1 1 0 0 2 6 1 0 1 0 0 0 22 0 2296.0343 Q15648 Q15648 1453 1474 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.022857 54.501 By MS/MS By matching 1 1 20901000 11118000 9783500 5726 2148 6522 14382;14383 13935 13935 4265 1 SPCGLTEQYLHK ANQEPTPKSPCGLTEQ LTEQYLHKDRWPEVSP K S P H K D 0 0 0 0 1 1 1 1 1 0 2 1 0 0 1 1 1 0 1 0 0 0 12 0 1431.6816 E9PGC8;P78559 E9PGC8 1410 1421 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.011121 72.815 By MS/MS By matching 1 1 9691000 4623900 5067100 5727 872 6523 14384;14385 13936 13936 1612 1 SPDEATAADQESEDDLSASR ASSPPDNKSPDEATAA EDDLSASRTSLERQAP K S P S R T 4 1 0 4 0 1 3 0 0 0 1 0 0 0 1 4 1 0 0 0 0 0 20 0 2092.8669 C9JME2;Q9Y4F1;M0QXT1 C9JME2 909 928 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 2 6.5978E-57 183.65 By MS/MS By MS/MS 1 1 27505000 13781000 13724000 5728 676 6524 14386;14387 13937;13938 13937 1247;1248 2 SPDEATAADQESEDDLSASRTSLER ASSPPDNKSPDEATAA ASRTSLERQAPHRGNT K S P E R Q 4 2 0 4 0 1 4 0 0 0 2 0 0 0 1 5 2 0 0 0 0 0 25 1 2679.1744 C9JME2;Q9Y4F1;M0QXT1 C9JME2 909 933 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 3 6.2936E-05 78.378 By MS/MS 1 10147000 10147000 0 5729 676 6525 14388 13939;13940 13939 1247;1248;1249 2 SPDEEDYDYESYEK QKPEETTRSPDEEDYD YDYESYEKTTRTSDVG R S P E K T 0 0 0 3 0 0 4 0 0 0 0 1 0 0 1 2 0 0 3 0 0 0 14 0 1767.6635 P46821 P46821 1881 1894 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0034013 88.155 By MS/MS 1 0 0 0 5730 1840 6526 14389 13941 13941 3505;8272;8273 1 SPEAVGPELEAEEK PPPGELARSPEAVGPE PELEAEEKLSVRVAES R S P E K L 2 0 0 0 0 0 5 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 14 0 1483.7042 Q96N64 Q96N64 81 94 PWWP2A PWWP domain-containing protein 2A yes yes 2 0.013446 69.345 By MS/MS By MS/MS 1 1 62407000 29364000 33043000 5731 2688 6527 14390;14391 13942;13943 13942 5546 2 SPEEPSTPGTVVSSPSISTPPIVPDIQK VNPKFLNKSPEEPSTP PIVPDIQKNLTQEQLI K S P Q K N 0 0 0 1 0 1 2 1 0 3 0 1 0 0 7 6 3 0 0 3 0 0 28 0 2845.4597 O94913;E9PKN0;E9PQ01 O94913 169 196 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 3 0.00045968 62.028 By MS/MS 1 11546000 11546000 0 5732 1576 6528 14392 13944 13944 2987 1 SPEKIEEVLSPEGSPSKSPSK ENIEITIKSPEKIEEV SPSKSPSKKKKKFRTP K S P S K K 0 0 0 0 0 0 4 1 0 1 1 3 0 0 4 6 0 0 0 1 0 0 21 2 2211.1271 Q9UEY8 Q9UEY8 664 684 ADD3 Gamma-adducin yes yes 3 0.00027784 87.554 By MS/MS By MS/MS 2 2 38529000 19779000 18750000 5733 2998 6529;6530 14393;14394;14395;14396 13945;13946;13947;13948;13949 13949 6304;6305;6306 5 SPFLKPDER FSRDRESRSPFLKPDE PFLKPDERAPTEMAKA R S P E R A 0 1 0 1 0 0 1 0 0 0 1 1 0 1 2 1 0 0 0 0 0 0 9 1 1087.5662 Q9H7N4 Q9H7N4 874 882 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.0083531 87.667 By MS/MS By matching 1 1 31991000 14592000 17400000 5734 2849 6531 14397;14398 13950 13950 6001 1 SPGASNFSTLPK PRGPSTPKSPGASNFS SNFSTLPKISPSSLSN K S P P K I 1 0 1 0 0 0 0 1 0 0 1 1 0 1 2 3 1 0 0 0 0 0 12 0 1204.6088 Q9Y4E8 Q9Y4E8 229 240 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 5.2354E-35 188.09 By MS/MS By matching 1 1 89110000 46039000 43071000 5735 3119 6532 14399;14400 13951 13951 6682;6683 1 SPGCRPLPSAGSPTPTTHEIVTVGDPLLSSGLR PSYSPTQRSPGCRPLP PLLSSGLRSIGSRRHS R S P L R S 1 2 0 1 1 0 1 4 1 1 4 0 0 0 6 5 4 0 0 2 0 0 33 1 3355.7194 Q03164 Q03164 2156 2188 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 4 0.011266 41.303 By MS/MS 1 16342000 16342000 0 5736 1994 6533 14401 13952 13952 3843;7523;7524;7525 1 SPGDFTSAAQLASTPFHK KTLAPSPKSPGDFTSA LASTPFHKLPVESVHI K S P H K L 3 0 0 1 0 1 0 1 1 0 1 1 0 2 2 3 2 0 0 0 0 0 18 0 1860.9006 O43683 O43683 596 613 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 3 0.020665 50.172 By MS/MS By matching 1 1 11756000 5051500 6704400 5737 1504 6534 14402;14403 13953 13953 1 SPGDGHNAPVEGPEGEYVELLEVTLPVR PEEALGTRSPGDGHNA LEVTLPVRGSPTDAEG R S P V R G 1 1 1 1 0 0 5 4 1 0 3 0 0 0 4 1 1 0 1 4 0 0 28 0 2959.4563 G3V485;G3V3N2;G3V5C1;Q8TER5 G3V485 226 253 ARHGEF40 Rho guanine nucleotide exchange factor 40 yes no 3 0.0014572 58.722 By MS/MS 1 5310900 0 5310900 5738 1076 6535 14404 13954 13954 8143 1 SPGEPGGAAPER RDGPGLERSPGEPGGA PGGAAPEREVPAAARG R S P E R E 2 1 0 0 0 0 2 3 0 0 0 0 0 0 3 1 0 0 0 0 0 0 12 0 1123.5258 Q96EB6 Q96EB6 47 58 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 2 0.015569 68.676 By MS/MS By matching 1 1 46495000 24006000 22489000 5739 2641 6536 14405;14406 13955 13955 5449 1 SPGFASPK GSVLDILKSPGFASPK SPGFASPKIDSVAAQP K S P P K I 1 0 0 0 0 0 0 1 0 0 0 1 0 1 2 2 0 0 0 0 0 0 8 0 789.4021 P49790 P49790 614 621 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.021177 72.2 By MS/MS By matching 1 1 10783000 6304100 4478800 5740 1859 6537 14407;14408 13956 13956 3585;3586 1 SPGHMVILDQTK EKKRISSKSPGHMVIL MVILDQTKGDHCRPSR K S P T K G 0 0 0 1 0 1 0 1 1 1 1 1 1 0 1 1 1 0 0 1 0 0 12 0 1324.6809 Q9NWH9;H7C3F4 Q9NWH9 553 564 SLTM SAFB-like transcription modulator yes no 2;3 0.00032045 115.12 By MS/MS By MS/MS 2 1 41759000 23951000 17809000 5741 2933 6538 14409;14410;14411 13957;13958;13959 13957 6188 3 SPGKAEAESDALPDDTVIESEALPSDIAAEAR TEAGAETRSPGKAEAE SDIAAEARAKTGGTVS R S P A R A 7 1 0 4 0 0 5 1 0 2 2 1 0 0 3 4 1 0 0 1 0 0 32 1 3253.5474 G3V529;Q9GZR7;F5GYL3 G3V529 244 275 DDX24 ATP-dependent RNA helicase DDX24 yes no 3;4 6.979E-07 78.383 By MS/MS By MS/MS 1 2 242740000 113010000 129730000 5742 1084 6539 14412;14413;14414 13960;13961;13962 13962 2043;2044;7173 3 SPGLCSDSLEK GDSGSRRRSPGLCSDS LCSDSLEKSLRITVGN R S P E K S 0 0 0 1 1 0 1 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 11 0 1191.5442 Q5VUA4 Q5VUA4 136 146 ZNF318 Zinc finger protein 318 yes yes 2 8.8692E-06 126.34 By MS/MS By MS/MS 1 1 33017000 11346000 21671000 5743 2268 6540 14415;14416 13963;13964;13965 13964 4558 3 SPGLLDTTPIR AADSRDCRSPGLLDTT LLDTTPIRGSCTTQRK R S P I R G 0 1 0 1 0 0 0 1 0 1 2 0 0 0 2 1 2 0 0 0 0 0 11 0 1168.6452 Q8IY92 Q8IY92 1469 1479 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2 0.018278 66.538 By MS/MS 1 5430900 5430900 0 5744 2440 6541 14417 13966 13966 4991 1 SPGLVPPSPEFAPR ESPGFESRSPGLVPPS PSPEFAPRSPESDSQS R S P P R S 1 1 0 0 0 0 1 1 0 0 1 0 0 1 5 2 0 0 0 1 0 0 14 0 1449.7616 Q9H5H4;H3BS42 Q9H5H4 90 103 ZNF768 Zinc finger protein 768 yes no 2 0.00054743 103.67 By MS/MS By MS/MS 2 2 66454000 40912000 25542000 5745 2838 6542 14418;14419;14420;14421 13967;13968;13969;13970;13971;13972;13973;13974 13969 5962;5963 8 SPGRPTQGALGEQQDLSNTTSK SGSHSQSRSPGRPTQG DLSNTTSKREECLQVK R S P S K R 1 1 1 1 0 3 1 3 0 0 2 1 0 0 2 3 3 0 0 0 0 0 22 1 2271.1091 P10071 P10071 664 685 GLI3 Transcriptional activator GLI3;Transcriptional repressor GLI3R yes yes 3 0.023335 45.913 By MS/MS By matching 1 1 19542000 11328000 8214800 5746 1670 6543 14422;14423 13975 13975 3156 1 SPGSISYLPSFFTK AEQRNDARSPGSISYL YLPSFFTKLENTSPMV R S P T K L 0 0 0 0 0 0 0 1 0 1 1 1 0 2 2 4 1 0 1 0 0 0 14 0 1529.7766 A0A088AWL3;O75376;E7EVK1;J3KS29;J3QKP0 A0A088AWL3 2088 2101 NCOR1 Nuclear receptor corepressor 1 yes no 2 4.8876E-150 250.05 By MS/MS By MS/MS 1 1 124420000 69312000 55104000 5747 177 6544 14424;14425 13976;13977 13977 293 2 SPGSNSKVPEIEVTVEGPNNNNPQTSAVR LQSPKRPRSPGSNSKV NPQTSAVRTPTQTNGS R S P V R T 1 1 5 0 0 1 3 2 0 1 0 1 0 0 4 4 2 0 0 4 0 0 29 1 3020.4799 P78347 P78347 674 702 GTF2I General transcription factor II-I yes yes 3 6.7002E-10 96.133 By MS/MS By MS/MS 2 3 757360000 364180000 393180000 5748 1962 6545;6546 14426;14427;14428;14429;14430 13978;13979;13980;13981;13982;13983;13984;13985;13986;13987;13988 13987 95 3747;3748 11 SPGSPPGPELPIETALDDR ISKCNELKSPGSPPGP IETALDDRERRISHSL K S P D R E 1 1 0 2 0 0 2 2 0 1 2 0 0 0 5 2 1 0 0 0 0 0 19 0 1946.9585 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8;B1AP52 Q5VWV2 635 653 PARD3 Partitioning defective 3 homolog yes no 3 5.9686E-05 101.05 By MS/MS 1 4159300 4159300 0 5749 2278 6547 14431 13989 13989 4576;4577 1 SPGSPVGEGTGSPPK EKYKAKSRSPGSPVGE EGTGSPPKWQIGEQEF R S P P K W 0 0 0 0 0 0 1 4 0 0 0 1 0 0 4 3 1 0 0 1 0 0 15 0 1352.6572 P35611;E7EV99;E7ENY0;H0Y9H2;A0A0A0MSR2 P35611 355 369 ADD1 Alpha-adducin yes no 2 2.8569E-11 143.46 By MS/MS By MS/MS 1 1 225830000 119160000 106670000 5750 1799 6548 14432;14433 13990;13991 13990 3396 2 SPGSQAPDEGAGGALR PKPEQAPRSPGSQAPD EGAGGALRSLLRSLPR R S P L R S 3 1 0 1 0 1 1 4 0 0 1 0 0 0 2 2 0 0 0 0 0 0 16 0 1468.6906 P10075 P10075 86 101 GLI4 Zinc finger protein GLI4 yes yes 2 0.0050913 76.574 By MS/MS By MS/MS 1 1 16672000 8767500 7904200 5751 1671 6549 14434;14435 13992;13993 13992 3157 2 SPGSSWQEYGPSDTCGSR ESPHWQSKSPGSSWQE PSDTCGSRRPTDRDYV K S P S R R 0 1 0 1 1 1 1 3 0 0 0 0 0 0 2 5 1 1 1 0 0 0 18 0 1956.7908 Q5JSZ5 Q5JSZ5 1231 1248 PRRC2B Protein PRRC2B yes yes 2 5.6123E-10 137.73 By MS/MS By MS/MS 1 1 16175000 8314700 7860500 5752 2220 6550 14436;14437 13994;13995;13996 13995 4446 3 SPGSTPTTPTSSQAPQK LEGERQPKSPGSTPTT TSSQAPQKLDASAAAA K S P Q K L 1 0 0 0 0 2 0 1 0 0 0 1 0 0 4 4 4 0 0 0 0 0 17 0 1670.8111 P35658 P35658 430 446 NUP214 Nuclear pore complex protein Nup214 yes yes 2;3 0.0014099 111.11 By MS/MS By MS/MS 2 2 151490000 68065000 83428000 5753 1801 6551 14438;14439;14440;14441 13997;13998;13999 13997 3404;7434;7435 3 SPGVAAAVAEDGGLKK MPVKKKRKSPGVAAAV AEDGGLKKCKISRS__ K S P K K C 4 0 0 1 0 0 1 3 0 0 1 2 0 0 1 1 0 0 0 2 0 0 16 1 1468.7886 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 9 24 DCUN1D5 DCN1-like protein;DCN1-like protein 5 yes no 2;3 0.00057432 97.073 By MS/MS By MS/MS 2 2 53246000 25816000 27430000 5754 903 6552 14442;14443;14444;14445 14000;14001;14002 14002 1681 2 SPGYESESSRYESQNTELK RSPGYEPRSPGYESES ESQNTELKTQSPEFEA R S P L K T 0 1 1 0 0 1 4 1 0 0 1 1 0 0 1 5 1 0 2 0 0 0 19 1 2189.9713 Q9H5H4;H3BS42 Q9H5H4 139 157 ZNF768 Zinc finger protein 768 yes no 2;3 0.0025572 85.176 By MS/MS By MS/MS 3 1 105290000 83347000 21941000 5755 2838 6553;6554 14446;14447;14448;14449 14003;14004;14005 14003 5964;5965;8461 3 SPHDEDPQAVTYAEVKHSR DGVEMDTRSPHDEDPQ YAEVKHSRPRREMASP R S P S R P 2 1 0 2 0 1 2 0 2 0 0 1 0 0 2 2 1 0 1 2 0 0 19 1 2165.0138 A8MVE2;A0A0G2JQ46;A0A0B4J1W1;A0A0G2JQ44;A0A087WSX8;A0A0G2JNM2;A0A0G2JQ15;Q8NHL6 A8MVE2 535 553 LILRB1 Leukocyte immunoglobulin-like receptor subfamily B member 1 yes no 3 0.0078624 57.432 By MS/MS By matching 1 1 16512000 8061200 8450400 5756 26 6555 14450;14451 14006 14006 54;55 1 SPHKDLGHR ENLAKSRKSPHKDLGH PHKDLGHRKEENRRPL K S P H R K 0 1 0 1 0 0 0 1 2 0 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1045.5417 C9JAT7;O94888 C9JAT7 188 196 UBXN7 UBX domain-containing protein 7 yes no 3 0.0056566 69.216 By MS/MS By matching 1 1 3586300 3033300 553050 5757 653 6556 14452;14453 14007 14007 1216 1 SPHQLLSPSSFSPSATPSQK TKRSVSTRSPHQLLSP PSATPSQKYNSRSNRG R S P Q K Y 1 0 0 0 0 2 0 0 1 0 2 1 0 1 4 7 1 0 0 0 0 0 20 0 2082.0382 E9PIQ6;Q14181 E9PIQ6 101 120 POLA2 DNA polymerase alpha subunit B yes no 3 0.0070307 55.536 By MS/MS By MS/MS 2 2 45885000 23509000 22377000 5758 885 6557;6558 14454;14455;14456;14457 14008;14009 14008 1641;1642;1643;1644 1 SPISPLSDASK NKNEKMLRSPISPLSD SPLSDASKHKYTSEDL R S P S K H 1 0 0 1 0 0 0 0 0 1 1 1 0 0 2 4 0 0 0 0 0 0 11 0 1100.5714 P51826 P51826 878 888 AFF3 AF4/FMR2 family member 3 yes yes 2 0.0042699 83.243 By MS/MS By MS/MS 1 1 7633100 3055800 4577300 5759 1880 6559 14458;14459 14010;14011 14011 3643 2 SPISVPGGSALISNLGK TKTITLVKSPISVPGG ALISNLGKVMSVVQTK K S P G K V 1 0 1 0 0 0 0 3 0 2 2 1 0 0 2 4 0 0 0 1 0 0 17 0 1595.8883 P51610;A6NEM2 P51610 666 682 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.00026119 97.823 By MS/MS By MS/MS 1 1 24441000 13956000 10485000 5760 1877 6560 14460;14461 14012;14013 14013 3639 2 SPLELGEKLSPLPGGPGAGDPR SARSFSPKSPLELGEK GPGAGDPRIWPGRSTP K S P P R I 1 1 0 1 0 0 2 5 0 0 4 1 0 0 5 2 0 0 0 0 0 0 22 1 2143.1273 Q15742 Q15742 162 183 NAB2 NGFI-A-binding protein 2 yes yes 3 0.0004647 75.703 By MS/MS By MS/MS 1 1 12400000 5174200 7225600 5761 2154 6561 14462;14463 14014;14015 14014 4278 2 SPLGEAPEPDSDAEVAEAAKPHLSEVTTEGYPSEPLGGLEQK NGGVKNGKSPLGEAPE PLGGLEQKAASSLVSY K S P Q K A 5 0 0 2 0 1 8 4 1 0 4 2 0 0 6 4 2 0 1 2 0 0 42 1 4331.0605 A2RU67 A2RU67 52 93 KIAA1467 Uncharacterized protein KIAA1467 yes yes 4 0.00025737 53.793 By MS/MS 1 27256000 27256000 0 5762 454 6562 14464 14016 14016 848 1 SPLGEAPPGTPPCR QPCQLCGRSPLGEAPP PPGTPPCRLCCPATAP R S P C R L 1 1 0 0 1 0 1 2 0 0 1 0 0 0 5 1 1 0 0 0 0 0 14 0 1434.6925 M0QXZ5;Q96B54 M0QXZ5 132 145 ZNF428 Zinc finger protein 428 yes no 2 1.8269E-10 138.99 By MS/MS By MS/MS 1 1 26732000 10982000 15751000 5763 1404 6563 14465;14466 14017;14018 14017 7272 1 SPLLAGGSPPQPVVPAHK SVGVMEMRSPLLAGGS QPVVPAHKDKSGAPPV R S P H K D 2 0 0 0 0 1 0 2 1 0 2 1 0 0 5 2 0 0 0 2 0 0 18 0 1750.973 Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5 66 83 NUP35 Nucleoporin NUP53 yes no 2 0.00082599 93.342 By matching By MS/MS 1 1 20314000 10188000 10125000 5764 2518 6564 14467;14468 14019;14020 14020 5146 2 SPLLNSPTVAK PTPANAAKSPLLNSPT LNSPTVAKQIFPWMKE K S P A K Q 1 0 1 0 0 0 0 0 0 0 2 1 0 0 2 2 1 0 0 1 0 0 11 0 1125.6394 O43365 O43365 143 153 HOXA3 Homeobox protein Hox-A3 yes yes 2 0.0021247 89.886 By MS/MS By MS/MS 1 1 10753000 5914900 4837600 5765 1496 6565 14469;14470 14021;14022 14022 2792 2 SPLPSYPGANPQPAFGAAEGQPPGAAK IPFGSSAKSPLPSYPG GQPPGAAKPALAPSFG K S P A K P 6 0 1 0 0 2 1 4 0 0 1 1 0 1 7 2 0 0 1 0 0 0 27 0 2576.266 A0A087WY75;A0A075B7F8;A8CG34;A6NF01;Q96HA1 Q96HA1 958 984 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 no no 3 0.0031683 54.3 By MS/MS By matching 1 1 19252000 6507100 12745000 5766 2660;24 6566 14471;14472 14023 14023 47 1 SPLSPTETFSWPDVR PGGRPSARSPLSPTET TFSWPDVRELCSKYAS R S P V R E 0 1 0 1 0 0 1 0 0 0 1 0 0 1 3 3 2 1 0 1 0 0 15 0 1717.8312 A1L390;G3V311 A1L390 1037 1051 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.0018433 83.751 By MS/MS By MS/MS 1 1 16934000 10711000 6222600 5767 445 6567 14473;14474 14024;14025 14025 831;832 2 SPMFPALGEASSDDDLFQSAKPK PPVGGKAKSPMFPALG LFQSAKPKPAKKTNPF K S P P K P 3 0 0 3 0 1 1 1 0 0 2 2 1 2 3 4 0 0 0 0 0 0 23 1 2437.1471 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6;A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1;Q5SRD0 F8W7U3 1081 1103 FAM21A;FAM21C;FAM21D WASH complex subunit FAM21A;WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 no no 3 5.0023E-05 87.356 By MS/MS By MS/MS 1 1 20284000 8163300 12121000 5768 814;183 6568 14475;14476 14026;14027 14027 78 318;319 2 SPPASPESWK SVSPSSWKSPPASPES PASPESWKSGPPELRK K S P W K S 1 0 0 0 0 0 1 0 0 0 0 1 0 0 3 3 0 1 0 0 0 0 10 0 1084.5189 Q96JM3 Q96JM3 382 391 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.02086 64.121 By MS/MS 1 8380500 8380500 0 5769 2674 6569 14477 14028 14028 5526;5527;5528 1 SPPKVPIVIQDDSLPAGPPPQIR QKESRKSKSPPKVPIV AGPPPQIRILKRPTSN K S P I R I 1 1 0 2 0 2 0 1 0 3 1 1 0 0 7 2 0 0 0 2 0 0 23 1 2420.3427 Q7Z422 Q7Z422 39 61 SZRD1 SUZ domain-containing protein 1 yes yes 3 0.0026916 60.343 By MS/MS By MS/MS 1 1 12142000 7540400 4601300 5770 2381 6570 14478;14479 14029;14030 14030 4837 2 SPPLIGSESAYESFLSADDK EKVLSPLRSPPLIGSE SFLSADDKASGRGAES R S P D K A 2 0 0 2 0 0 2 1 0 1 2 1 0 1 2 5 0 0 1 0 0 0 20 0 2111.9899 P46821 P46821 1400 1419 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0035873 70.68 By MS/MS By MS/MS 1 1 16415000 8449300 7965900 5771 1840 6571 14480;14481 14031;14032 14032 3506;3507;8274 2 SPPLLESPDATR SDSQQAVKSPPLLESP LESPDATRESMVKLSS K S P T R E 1 1 0 1 0 0 1 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 12 0 1281.6565 Q15036 Q15036 415 426 SNX17 Sorting nexin-17 yes yes 2 0.02107 81.904 By matching By MS/MS 1 1 25062000 13612000 11450000 5772 2121 6572 14482;14483 14033 14033 4193 0 SPPLPAVIR VRRPQRPRSPPLPAVI PPLPAVIRNAPSRPPS R S P I R N 1 1 0 0 0 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 9 0 948.57565 Q9Y6X9 Q9Y6X9 615 623 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 0.0039969 96.665 By MS/MS By MS/MS 1 1 104760000 56635000 48128000 5773 3155 6573 14484;14485 14034;14035 14034 6749 2 SPPLSPVGTTPVK KSPSGPVKSPPLSPVG PVGTTPVKLKRAAPKE K S P V K L 0 0 0 0 0 0 0 1 0 0 1 1 0 0 4 2 2 0 0 2 0 0 13 0 1278.7184 C9J4K0;Q9BVC5 C9J4K0 147 159 C2orf49 Ashwin yes no 2 0.00047905 115.24 By MS/MS By MS/MS 1 1 30863000 16858000 14005000 5774 636 6574 14486;14487 14036;14037;14038;14039;14040;14041;14042;14043;14044 14039 1190;1191;7014;7015 9 SPPQQKGSSGSSASSSNS S P N S 1 0 1 0 0 2 0 2 0 0 0 1 0 0 2 9 0 0 0 0 0 0 18 1 1678.7394 REV__H0YGL7 yes yes 2 0.012376 58.848 By MS/MS By MS/MS 1 1 50812000 24987000 25824000 + 5775 3187 6575 14488;14489 14045;14046 14046 6783;6784 2 SPPSPVER LELQSHAKSPPSPVER SPPSPVEREMVVQVER K S P E R E 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 2 0 0 0 1 0 0 8 0 867.44503 Q02952 Q02952 1328 1335 AKAP12 A-kinase anchor protein 12 yes yes 2 0.0090979 97.565 By MS/MS By MS/MS 1 1 84808000 42433000 42375000 5776 1991 6576 14490;14491 14047;14048;14049;14050;14051 14048 3831 5 SPPSSSEIFTPAHEENVR GKRTSSPRSPPSSSEI PAHEENVRFIYEAWQG R S P V R F 1 1 1 0 0 0 3 0 1 1 0 0 0 1 3 4 1 0 0 1 0 0 18 0 1982.9334 I3L2L5;I3L317;I3L4Q0;C9JLW8;I3L3A7 I3L2L5 16 33 FAM195B Protein FAM195B yes no 2;3 0.00011021 96.012 By MS/MS By MS/MS 2 3 56857000 23407000 33450000 5777 674 6577 14492;14493;14494;14495;14496 14052;14053;14054;14055;14056;14057 14055 1243;1244 6 SPPTTMLLPASPAK GVLSPQKKSPPTTMLL LLPASPAKAPETEPID K S P A K A 2 0 0 0 0 0 0 0 0 0 2 1 1 0 4 2 2 0 0 0 0 0 14 0 1409.7588 Q9UGU5 Q9UGU5 502 515 HMGXB4 HMG domain-containing protein 4 yes yes 2 0.013938 55.98 By MS/MS 1 7106400 0 7106400 5778 3002 6578 14497 14058 14058 1192 6317 1 SPPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK LPPYASPRSPPVQPHT HAINYVNKIKNRFQGQ R S P N K I 2 0 5 0 0 3 1 1 2 2 2 1 0 1 6 3 3 0 1 4 0 0 37 0 4008.0494 Q96ST3 Q96ST3 277 313 SIN3A Paired amphipathic helix protein Sin3a yes yes 4 0.0024278 48.76 By MS/MS By matching 1 1 108380000 52176000 56207000 5779 2712 6579 14498;14499 14059 14059 7810 1 SPQEEDFRCPSDEDFR HPPDEDFRSPQEEDFR CPSDEDFRQLPEEDLR R S P F R Q 0 2 0 3 1 1 3 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 16 1 2012.817 B9ZVT1;Q8IXT5 B9ZVT1 709 724 RBM12B RNA-binding protein 12B no no 1 NaN 0 0 0 5780 614 0 SPQFINLK NLVANTARSPQFINLK SPQFINLKRDPRQAAG R S P L K R 0 0 1 0 0 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 8 0 945.52837 Q92576 Q92576 1642 1649 PHF3 PHD finger protein 3 yes yes 2 0.0077904 106.88 By MS/MS By MS/MS 1 1 12132000 6201000 5930800 5781 2585 6580 14500;14501 14060;14061 14060 5312 2 SPQGPSPVLAEDSEGEG GSILAPVRSPQGPSPV AEDSEGEG________ R S P E G - 1 0 0 1 0 1 3 3 0 0 1 0 0 0 3 3 0 0 0 1 0 0 17 0 1654.7322 Q99638 Q99638 375 391 RAD9A Cell cycle checkpoint control protein RAD9A yes yes 2 0.00029886 113.11 By MS/MS By MS/MS 1 1 34412000 18878000 15534000 5782 2729 6581 14502;14503 14062;14063 14063 5668 2 SPQLSDFGLER CISEKSPRSPQLSDFG LSDFGLERYIVSQVLP R S P E R Y 0 1 0 1 0 1 1 1 0 0 2 0 0 1 1 2 0 0 0 0 0 0 11 0 1247.6146 Q8IX90 Q8IX90 155 165 SKA3 Spindle and kinetochore-associated protein 3 yes yes 2 0.001457 103.14 By MS/MS By MS/MS 1 1 41788000 21932000 19856000 5783 2434 6582 14504;14505 14064;14065 14065 4979 2 SPQLSLSPR TPKNPEDKSPQLSLSP PQLSLSPRPASPKAQW K S P P R P 0 1 0 0 0 1 0 0 0 0 2 0 0 0 2 3 0 0 0 0 0 0 9 0 983.53999 B9EGQ5;M0QXA7;O95785 B9EGQ5 187 195 WIZ Protein Wiz yes no 2 0.016541 69.672 By MS/MS 1 3442000 3442000 0 5784 612 6583 14506 14066 14066 1108;1109;1110 1 SPQLSLSPRPASPK TPKNPEDKSPQLSLSP SPRPASPKAQWPQSED K S P P K A 1 1 0 0 0 1 0 0 0 0 2 1 0 0 4 4 0 0 0 0 0 0 14 1 1463.8096 B9EGQ5;M0QXA7;O95785 B9EGQ5 187 200 WIZ Protein Wiz yes no 2;3 0.01783 79.337 By MS/MS By MS/MS 2 2 26971000 14457000 12514000 5785 612 6584;6585 14507;14508;14509;14510 14067;14068;14069 14067 1108;1109;1110;1111 1 SPQPPSR EKGKPKPRSPQPPSRQ RSPQPPSRQAEPPKKE R S P S R Q 0 1 0 0 0 1 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 7 0 767.3926 E7ERS3;Q86VM9 E7ERS3 511 517 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.025913 90.709 By MS/MS By MS/MS 1 1 21029000 12125000 8904500 5786 811 6586 14511;14512 14070;14071;14072 14072 1468 3 SPQPVCSPAGSEGTPK NAASFPLRSPQPVCSP AGSEGTPKGSRPPLIL R S P P K G 1 0 0 0 1 1 1 2 0 0 0 1 0 0 4 3 1 0 0 1 0 0 16 0 1597.7406 Q6KC79 Q6KC79 274 289 NIPBL Nipped-B-like protein yes yes 2 0.0054197 76.158 By matching By MS/MS 1 1 19008000 10305000 8702800 5787 2307 6587 14513;14514 14073 14073 4654;4655 1 SPQQTVPYVVPLSPK TERQSTKRSPQQTVPY YVVPLSPKLPKTKEYA R S P P K L 0 0 0 0 0 2 0 0 0 0 1 1 0 0 4 2 1 0 1 3 0 0 15 0 1638.8981 H0Y6S1;Q9UQR0 H0Y6S1 15 29 SCML2 Sex comb on midleg-like protein 2 yes no 2;3 7.7202E-54 193 By MS/MS By MS/MS 2 3 118810000 59613000 59194000 5788 1136 6588;6589 14515;14516;14517;14518;14519 14074;14075;14076;14077;14078;14079;14080 14074 2160;2161;7199 7 SPQTLAPVGEDAMKTPSPAAEDAR GLTLKEERSPQTLAPV SPAAEDAREPEAKGNS R S P A R E 5 1 0 2 0 1 2 1 0 0 1 1 1 0 4 2 2 0 0 1 0 0 24 1 2438.1748 Q92797 Q92797 1243 1266 SYMPK Symplekin yes yes 3 0.008871 56.404 By matching By MS/MS 1 1 29685000 17138000 12546000 5789 2603 6590 14520;14521 14081 14081 1041 5344;5353;7764 1 SPQTLAPVGEDAMKTPSPAAEDAREPEAK GLTLKEERSPQTLAPV DAREPEAKGNS_____ R S P A K G 6 1 0 2 0 1 4 1 0 0 1 2 1 0 5 2 2 0 0 1 0 0 29 2 2992.4448 Q92797 Q92797 1243 1271 SYMPK Symplekin yes yes 3 0.0092713 50.869 By MS/MS 1 39931000 39931000 0 5790 2603 6591 14522 14082 14082 1041 5344;5353;7764 1 SPQVKPASTMGMGPLGK AQVKPLGKSPQVKPAS MGMGPLGKGAGPVPPG K S P G K G 1 0 0 0 0 1 0 3 0 0 1 2 2 0 3 2 1 0 0 1 0 0 17 1 1684.864 J3KQ96;E7ETY2;Q13428 J3KQ96 503 519 TCOF1 Treacle protein no no 3 0.0013416 79.029 By MS/MS By matching 1 1 13106000 4841100 8265200 5791 822;2059 6592 14523;14524 14083 14083 310 1510 1 SPRITPPAAKPGSPQAK PVPSMVQKSPRITPPA KPGSPQAKSLQPAVAE K S P A K S 3 1 0 0 0 1 0 1 0 1 0 2 0 0 5 2 1 0 0 0 0 0 17 2 1701.9526 P35658;A0A0A0MSW3 P35658 666 682 NUP214 Nuclear pore complex protein Nup214 yes no 3 0.019247 57.981 By MS/MS By matching 1 1 20444000 9309300 11135000 5792 1801 6593 14525;14526 14084 14084 3402;3405 1 SPRPASPASNVVVLPSGSTVYVK SGSIATVKSPRPASPA SGSTVYVKSVSCSDED K S P V K S 2 1 1 0 0 0 0 1 0 0 1 1 0 0 4 5 1 0 1 5 0 0 23 1 2311.2536 E9PMC9;Q7Z589 E9PMC9 169 191 C11orf30;EMSY Protein EMSY yes no 3 0.0022986 61.537 By MS/MS By MS/MS 1 1 18172000 11874000 6297600 5793 912 6594 14527;14528 14085;14086 14086 1691;1692 2 SPRSPQLSDFGLER ASSCISEKSPRSPQLS LSDFGLERYIVSQVLP K S P E R Y 0 2 0 1 0 1 1 1 0 0 2 0 0 1 2 3 0 0 0 0 0 0 14 1 1587.8005 Q8IX90 Q8IX90 152 165 SKA3 Spindle and kinetochore-associated protein 3 yes yes 2;3 0.0033225 73.057 By MS/MS By MS/MS 2 2 65025000 32523000 32502000 5794 2434 6595 14529;14530;14531;14532 14087;14088;14089 14087 4979 3 SPSAGILR LARVADPRSPSAGILR SPSAGILRTPIQVESS R S P L R T 1 1 0 0 0 0 0 1 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 0 799.4552 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 29 36 CDCA3 Cell division cycle-associated protein 3 yes no 2 0.014703 78.264 By MS/MS By MS/MS 1 1 10692000 6503000 4189100 5795 2728 6596 14533;14534 14090;14091 14090 5664 2 SPSAIPEQNHSLNDQAK SQKGICPKSPSAIPEQ HSLNDQAKGESHEYVT K S P A K G 2 0 2 1 0 2 1 0 1 1 1 1 0 0 2 3 0 0 0 0 0 0 17 0 1834.881 Q13129 Q13129 632 648 RLF Zinc finger protein Rlf yes yes 2 0.011962 66.939 By MS/MS By matching 1 1 14735000 7687000 7048000 5796 2043 6597 14535;14536 14092 14092 4010 1 SPSDLHISPLAK PGSSLEARSPSDLHIS LHISPLAKKLPPPPGS R S P A K K 1 0 0 1 0 0 0 0 1 1 2 1 0 0 2 3 0 0 0 0 0 0 12 0 1263.6823 B9EGQ5;M0QXA7;O95785 B9EGQ5 308 319 WIZ Protein Wiz yes no 2 2.3158E-06 126.5 By MS/MS By matching 3 3 110400000 57375000 53028000 5797 612 6598;6599 14537;14538;14539;14540;14541;14542 14093;14094;14095 14093 1112;1113;1114 3 SPSDLLDASAVSATSR AGKPAAQKSPSDLLDA SAVSATSRYIEEQ___ K S P S R Y 3 1 0 2 0 0 0 0 0 0 2 0 0 0 1 5 1 0 0 1 0 0 16 0 1575.774 K7EJ05;K7EQ84;K7EPP9;K7ELY2;X6R2W0;K7EIY4;Q5U8S2;O60499 K7EJ05 38 53 STX10 Syntaxin-10 yes no 2 6.5951E-14 142.32 By MS/MS By MS/MS 1 1 39191000 24189000 15002000 5798 1367 6600 14543;14544 14096;14097 14096 2536 1 SPSDSGYSYETIGK EKIERTTKSPSDSGYS YSYETIGKTTKTPEDG K S P G K T 0 0 0 1 0 0 1 2 0 1 0 1 0 0 1 4 1 0 2 0 0 0 14 0 1489.6573 P46821 P46821 1915 1928 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.4644E-80 214.82 By MS/MS By MS/MS 1 1 91666000 45944000 45722000 5799 1840 6601 14545;14546 14098;14099 14099 3508;3509;3510 2 SPSDSSTASTPVAEQIER APTPIPTRSPSDSSTA PVAEQIERALDEVTSS R S P E R A 2 1 0 1 0 1 2 0 0 1 0 0 0 0 2 5 2 0 0 1 0 0 18 0 1860.8701 Q16643;D6R9Q9 Q16643 337 354 DBN1 Drebrin yes no 2 1.7453E-53 189.44 By MS/MS By MS/MS 2 2 52077000 25059000 27019000 5800 2166 6602;6603 14547;14548;14549;14550 14100;14101;14102 14101 4311;4312;4313;4314;7613;7614 3 SPSESFIGR PDEPLLQKSPSESFIG PSESFIGREKRSNSQS K S P G R E 0 1 0 0 0 0 1 1 0 1 0 0 0 1 1 3 0 0 0 0 0 0 9 0 978.47706 Q15139;F8WBA3 Q15139 235 243 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 2 0.0092727 79.07 By MS/MS By MS/MS 1 1 34613000 16982000 17631000 5801 2129 6604 14551;14552 14103;14104 14104 4210 2 SPSFASEWDEIEK IGKKRLEKSPSFASEW SEWDEIEKIMSSIGEG K S P E K I 1 0 0 1 0 0 3 0 0 1 0 1 0 1 1 3 0 1 0 0 0 0 13 0 1523.678 Q92625 Q92625 661 673 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2 1.0504E-06 128.85 By MS/MS By MS/MS 1 1 69052000 42842000 26210000 5802 2592 6605 14553;14554 14105;14106 14106 5327 1 SPSGGAAGPLLTPSQSLDGSR PTLELASRSPSGGAAG SQSLDGSRRSGYITIG R S P S R R 2 1 0 1 0 1 0 4 0 0 3 0 0 0 3 5 1 0 0 0 0 0 21 0 1953.9756 Q96CX2 Q96CX2 185 205 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 2;3 0.00029295 108.18 By MS/MS By MS/MS 4 4 136070000 63372000 72697000 5803 2633 6606;6607 14555;14556;14557;14558;14559;14560;14561;14562 14107;14108;14109;14110;14111;14112;14113 14112 5411;5412;5413;5414;7779 6 SPSGGAAGPLLTPSQSLDGSRR PTLELASRSPSGGAAG QSLDGSRRSGYITIGY R S P R R S 2 2 0 1 0 1 0 4 0 0 3 0 0 0 3 5 1 0 0 0 0 0 22 1 2110.0767 Q96CX2 Q96CX2 185 206 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 3 0.0026082 71.592 By MS/MS By MS/MS 2 2 70744000 34898000 35846000 5804 2633 6608;6609 14563;14564;14565;14566 14114;14115;14116;14117 14114 5411;5412;5413;5414;7779 4 SPSGPPAMDLEGPR MDFPTISRSPSGPPAM AMDLEGPRDILVPSED R S P P R D 1 1 0 1 0 0 1 2 0 0 1 0 1 0 4 2 0 0 0 0 0 0 14 0 1409.6609 O96018 O96018 9 22 APBA3 Amyloid beta A4 precursor protein-binding family A member 3 yes yes 2 0.017332 53.168 By MS/MS By matching 1 1 9645700 5396200 4249400 5805 1618 6610 14567;14568 14118;14119 14118 581 3064 2 SPSGPVKSPPLSPVGTTPVK NHDLTHRKSPSGPVKS PVGTTPVKLKRAAPKE K S P V K L 0 0 0 0 0 0 0 2 0 0 1 2 0 0 6 4 2 0 0 3 0 0 20 1 1931.0728 C9J4K0;Q9BVC5 C9J4K0 140 159 C2orf49 Ashwin yes no 3 0.0034355 61.141 By MS/MS By MS/MS 1 1 31334000 13567000 17766000 5806 636 6611 14569;14570 14120;14121 14121 1188;1189;1190;1191;7014;7015 2 SPSGSAFGSQENLR TIASPPERSPSGSAFG FGSQENLRWRKDMTHW R S P L R W 1 1 1 0 0 1 1 2 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1435.6692 Q96N67;A0A1B0GWE0 Q96N67 1430 1443 DOCK7 Dedicator of cytokinesis protein 7 no no 2 1.5554E-20 156.2 By MS/MS By MS/MS 2 2 231840000 124880000 106960000 5807 2689;433 6612 14571;14572;14573;14574 14122;14123;14124;14125;14126;14127 14126 807;808;809;5557;5558 6 SPSLDNPTPFPNLGPSENPLKR EPCPQPLRSPSLDNPT PSENPLKRLLVPGEEW R S P K R L 0 1 3 1 0 0 1 1 0 0 3 1 0 1 6 3 1 0 0 0 0 0 22 1 2376.2074 M0R0R8;M0R0X9;M0QXC8;M0QX56;M0R3C2;M0QYT9;M0R205;M0QZB8;M0QZB7;Q14653 M0R0R8 27 48 IRF3 Interferon regulatory factor 3 yes no 3 0.00072382 70.413 By MS/MS By MS/MS 1 1 12769000 6698800 6069900 5808 1397 6613 14575;14576 14128;14129;14130 14130 2568 3 SPSLGSDLTFATR VHSGSGCRSPSLGSDL SDLTFATRTGSRQGIE R S P T R T 1 1 0 1 0 0 0 1 0 0 2 0 0 1 1 3 2 0 0 0 0 0 13 0 1350.6779 Q13425 Q13425 393 405 SNTB2 Beta-2-syntrophin yes yes 2 0.014262 88.075 By MS/MS 1 0 0 0 5809 2058 6614 14577 14131 14131 4056;4057 1 SPSLNLLQNK PEILVVSRSPSLNLLQ SLNLLQNKSM______ R S P N K S 0 0 2 0 0 1 0 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 0 1112.619 O43353 O43353 529 538 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 2 1.9922E-05 152.67 By MS/MS By MS/MS 2 1 18475000 10295000 8180300 5810 1495 6615 14578;14579;14580 14132;14133;14134;14135 14134 2791 4 SPSLSPSPPSPLEK SEKVSPSKSPSLSPSP SPPSPLEKTPLGERSV K S P E K T 0 0 0 0 0 0 1 0 0 0 2 1 0 0 5 5 0 0 0 0 0 0 14 0 1421.7402 P46821 P46821 1256 1269 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.6411E-33 177.39 By MS/MS By MS/MS 2 2 115720000 59538000 56187000 5811 1840 6616;6617 14581;14582;14583;14584 14136;14137;14138;14139;14140;14141;14142;14143 14140 3511;3512;3513;3514 6 SPSLSPSPPSPLEKTPLGER SEKVSPSKSPSLSPSP EKTPLGERSVNFSLTP K S P E R S 0 1 0 0 0 0 2 1 0 0 3 1 0 0 6 5 1 0 0 0 0 0 20 1 2075.0899 P46821 P46821 1256 1275 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 1.5578E-10 112.3 By MS/MS By MS/MS 1 1 14603000 8412800 6190500 5812 1840 6618 14585;14586 14144;14145 14145 3511;3512;3513;3514 0 SPSPAHLPDDPK AVSATYERSPSPAHLP AHLPDDPKVAEKQRET R S P P K V 1 0 0 2 0 0 0 0 1 0 1 1 0 0 4 2 0 0 0 0 0 0 12 0 1259.6146 Q92615;H0Y4V9;H0Y641;A0A087X183 Q92615 599 610 LARP4B La-related protein 4B yes no 2 0.0080944 76.24 By MS/MS By matching 1 1 49414000 25148000 24266000 5813 2587 6619 14587;14588 14146 14146 5319 1 SPSPAPPPR PPPTRRRRSPSPAPPP PSPAPPPRRRRTPTPP R S P P R R 1 1 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 9 0 904.47667 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 569 577 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0085777 73.841 By MS/MS By MS/MS 1 1 51575000 25069000 26506000 5814 511 6620 14589;14590 14147;14148 14148 960;961 2 SPSPAVPLR WLPSSPARSPSPAVPL PSPAVPLRVVPTLSTT R S P L R V 1 1 0 0 0 0 0 0 0 0 1 0 0 0 3 2 0 0 0 1 0 0 9 0 922.52362 Q6P4R8;E9PQ59 Q6P4R8 226 234 NFRKB Nuclear factor related to kappa-B-binding protein yes no 2 0.015758 70.525 By MS/MS By MS/MS 1 1 12424000 6106300 6317800 5815 2322 6621 14591;14592 14149;14150 14150 4682 1 SPSPEPIYNSEGK IPPNPEDRSPSPEPIY PIYNSEGKRLNTREFR R S P G K R 0 0 1 0 0 0 2 1 0 1 0 1 0 0 3 3 0 0 1 0 0 0 13 0 1403.6569 Q15637 Q15637 80 92 SF1 Splicing factor 1 yes yes 2 0.0024097 83.823 By MS/MS By MS/MS 1 1 24571000 12592000 11979000 5816 2147 6622 14593;14594 14151;14152 14152 4258;4259;4260 1 SPSPGLFR FPTAGGFRSPSPGLFR SPSPGLFRASLVSSAS R S P F R A 0 1 0 0 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 0 0 8 0 859.4552 Q9HAW4;E7ESG2 Q9HAW4 808 815 CLSPN Claspin yes no 2 0.010339 120.31 By MS/MS By MS/MS 2 1 8844000 0 8844000 5817 2861 6623 14595;14596;14597 14153;14154;14155;14156 14155 6027 4 SPSPPLPTHIPPEPPRTPPFPAK LLPMISPRSPSPPLPT RTPPFPAKTFQVVPEI R S P A K T 1 1 0 0 0 0 1 0 1 1 1 1 0 1 11 2 2 0 0 0 0 0 23 1 2456.3216 Q8IZ21 Q8IZ21 342 364 PHACTR4 Phosphatase and actin regulator 4 yes yes 3 0.0046098 68.525 By matching By MS/MS 1 2 15670000 7444300 8225600 5818 2446 6624 14598;14599;14600 14157;14158 14158 5001;7713;7714 1 SPSPPTQHTGQPPGQPSAPSQLSAPR LSPKPPTRSPSPPTQH PSQLSAPRRYSSSLSP R S P P R R 2 1 0 0 0 4 0 2 1 0 1 0 0 0 8 5 2 0 0 0 0 0 26 0 2606.2837 Q68EM7;I3L460 Q68EM7 674 699 ARHGAP17 Rho GTPase-activating protein 17 yes no 3 1.6918E-06 87.457 By MS/MS By MS/MS 1 1 188610000 58185000 130420000 5819 2297 6625 14601;14602 14159;14160 14160 4623;7657 2 SPSPVLR PKPDPVLKSPSPVLRL KSPSPVLRLVLSGEKK K S P L R L 0 1 0 0 0 0 0 0 0 0 1 0 0 0 2 2 0 0 0 1 0 0 7 0 754.43374 A0A0A0MSA7;O43432;A0A0U1RQK7 A0A0A0MSA7 229 235 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 2 0.029427 74.717 By matching By MS/MS 1 1 13096000 6104700 6990800 5820 243 6626 14603;14604 14161 14161 1 SPSPYYSR YDYRYRRRSPSPYYSR SPSPYYSRYRSRSRSR R S P S R Y 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 2 0 0 0 8 0 955.43995 Q13595;H7BXF3;P62995;H7C2L4 Q13595 260 267 TRA2A;TRA2B Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta yes no 2 0.031259 58.63 By MS/MS 1 5793400 0 5793400 5821 2069 6627 14605 14162 14162 4082;4083 0 SPSQDFSFIEDTEILDSAMYR PSQGPPARSPSQDFSF ILDSAMYRSRANLGRK R S P Y R S 1 1 0 3 0 1 2 0 0 2 1 0 1 2 1 4 1 0 1 0 0 0 21 0 2450.0948 Q9C0C2 Q9C0C2 1552 1572 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.029982 43.328 By MS/MS 1 7804400 0 7804400 5822 2791 6628 14606 14163 14163 1106 1 SPSSCNDLYATVK SIQGDPQRSPSSCNDL NDLYATVKDFEKTPNS R S P V K D 1 0 1 1 1 0 0 0 0 0 1 1 0 0 1 3 1 0 1 1 0 0 13 0 1440.6555 Q9NWQ8 Q9NWQ8 351 363 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 2.2751E-11 150.09 By MS/MS By MS/MS 1 1 41315000 20398000 20917000 5823 2936 6629 14607;14608 14164;14165 14165 8476 2 SPSSCNDLYATVKDFEK SIQGDPQRSPSSCNDL ATVKDFEKTPNSTLPP R S P E K T 1 0 1 2 1 0 1 0 0 0 1 2 0 1 1 3 1 0 1 1 0 0 17 1 1959.8884 Q9NWQ8 Q9NWQ8 351 367 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2;3 0.002096 78.249 By MS/MS By MS/MS 2 1 13589000 9907700 3681400 5824 2936 6630 14609;14610;14611 14166;14167 14167 8476 2 SPSSDSWTCADTSTER AEPTKTRKSPSSDSWT CADTSTERRSSDSWEV K S P E R R 1 1 0 2 1 0 1 0 0 0 0 0 0 0 1 5 3 1 0 0 0 0 16 0 1785.7112 F8VWH9;Q8N6T3;H0YIQ0;E5RHH7 F8VWH9 277 292 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes no 2 0.0075183 73.498 By MS/MS By matching 1 1 11162000 5534000 5628300 5825 1019 6631 14612;14613 14168 14168 1907 1 SPSSEWLVR TPASQAPKSPSSEWLV PSSEWLVRTSAAEKAT K S P V R T 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 1 0 1 0 0 9 0 1059.5349 Q9NWQ4 Q9NWQ4 447 455 GPATCH2L G patch domain-containing protein 2-like yes yes 2 0.019039 67.494 By MS/MS 1 2839500 0 2839500 5826 2935 6632 14614 14169 14169 6189 1 SPSSKPSLAVAVDSAPEVAVK DSLMHLTKSPSSKPSL SAPEVAVKEDLETGVH K S P V K E 4 0 0 1 0 0 1 0 0 0 1 2 0 0 3 5 0 0 0 4 0 0 21 1 2038.0946 Q5SRN1;O60508 Q5SRN1 43 63 CDC40 Pre-mRNA-processing factor 17 yes no 2;3 0.0025648 72.585 By MS/MS By MS/MS 2 2 54925000 29079000 25846000 5827 1520 6633 14615;14616;14617;14618 14170;14171;14172 14172 2870;2871 3 SPSVPKSPTPKSPPSR AMATSPQKSPSVPKSP TPKSPPSRKKDDSFLG K S P S R K 0 1 0 0 0 0 0 0 0 0 0 2 0 0 6 5 1 0 0 1 0 0 16 2 1647.8944 J3KNQ4;Q9NVD7 J3KNQ4 48 63 PARVA Alpha-parvin yes no 3 0.022517 55.98 By matching By MS/MS 1 1 23059000 12823000 10236000 5828 1321 6634 14619;14620 14173 14173 2449 1 SPTAALNESLVECPK EKVAASPKSPTAALNE ESLVECPKCNIQYPAT K S P P K C 2 0 1 0 1 0 2 0 0 0 2 1 0 0 2 2 1 0 0 1 0 0 15 0 1614.7923 Q53EZ4 Q53EZ4 428 442 CEP55 Centrosomal protein of 55 kDa yes yes 2 0.00012177 117.13 By matching By MS/MS 1 1 5120200 2156400 2963800 5829 2202 6635 14621;14622 14174 14174 4408;4409;7631 1 SPTAPSVFSPTGNR IPKQAPFRSPTAPSVF VFSPTGNRTPIPPSRT R S P N R T 1 1 1 0 0 0 0 1 0 0 0 0 0 1 3 3 2 0 0 1 0 0 14 0 1416.6997 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 229 242 NELFA Negative elongation factor A yes no 2 3.8058E-16 148.41 By MS/MS By MS/MS 1 1 34599000 19266000 15334000 5830 300 6636 14623;14624 14175;14176 14175 529 2 SPTGPSNSFLANMGGTVAHK YEEQDRPRSPTGPSNS MGGTVAHKIMQKYGFR R S P H K I 2 0 2 0 0 0 0 3 1 0 1 1 1 1 2 3 2 0 0 1 0 0 20 0 1971.9473 H0Y6J6;Q5W012;Q96I25 H0Y6J6 129 148 RBM17 Splicing factor 45 yes no 3 0.00016748 89.392 By MS/MS By MS/MS 1 2 22471000 8167600 14304000 5831 1134 6637;6638 14625;14626;14627 14177;14178;14179 14179 413 2158;7198 3 SPTKAPHLQLIEGK GDGRREVRSPTKAPHL HLQLIEGKKNSLRVEG R S P G K K 1 0 0 0 0 1 1 1 1 1 2 2 0 0 2 1 1 0 0 0 0 0 14 1 1517.8566 O43491;E9PK52;E9PHY5;H0Y5B0;E9PII3 O43491 598 611 EPB41L2 Band 4.1-like protein 2 yes no 2;3 0.0036903 75.445 By MS/MS By matching 2 2 55356000 28398000 26957000 5832 1502 6639 14628;14629;14630;14631 14180;14181 14180 2806;7314 1 SPTMEQAVQTASAHLPAPAAVGR PQLDPLRKSPTMEQAV PAPAAVGRRSPVSTRP K S P G R R 6 1 0 0 0 2 1 1 1 0 1 0 1 0 3 2 2 0 0 2 0 0 23 0 2289.1536 Q8ND56 Q8ND56 192 214 LSM14A Protein LSM14 homolog A yes yes 3 0.00010068 79.36 By MS/MS By MS/MS 2 2 66412000 32543000 33869000 5833 2506 6640;6641 14632;14633;14634;14635 14182;14183;14184;14185;14186 14184 1010 5116 5 SPTPPPTLHLVPEPAAPPPPPPR PPSQGPHKSPTPPPTL APPPPPPRTFQMVTTP K S P P R T 2 1 0 0 0 0 1 0 1 0 2 0 0 0 12 1 2 0 0 1 0 0 23 0 2361.2845 A0A087WWH3;Q9NZM4 A0A087WWH3 867 889 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein yes no 3 1.9067E-05 94.45 By MS/MS By MS/MS 1 1 12031000 5636400 6394400 5834 89 6642 14636;14637 14187;14188;14189 14187 6853 3 SPTSPLNMK FIQPSAQKSPTSPLNM PTSPLNMKLGRPRIKK K S P M K L 0 0 1 0 0 0 0 0 0 0 1 1 1 0 2 2 1 0 0 0 0 0 9 0 973.49027 A0A0A0MRP6;B7ZLQ5;P28370 A0A0A0MRP6 116 124 SMARCA1 Probable global transcription activator SNF2L1 yes no 2 0.011932 75.566 By MS/MS By MS/MS 1 1 22260000 10515000 11745000 5835 227 6643 14638;14639 14190;14191 14191 404;6897 2 SPTTVLFTSSPIK NTSALTIRSPTTVLFT LFTSSPIKTAVVPASH R S P I K T 0 0 0 0 0 0 0 0 0 1 1 1 0 1 2 3 3 0 0 1 0 0 13 0 1376.7551 H0YLX2;Q2KHR2 H0YLX2 349 361 RFX7 DNA-binding protein RFX7 yes no 2 2.7105E-05 96.371 By MS/MS By matching 1 1 7355000 4379800 2975200 5836 1214 6644 14640;14641 14192 14192 2260;2261;7221 0 SPTVSQSRSGSQEAEESIHPNTQEK RASSEGQRSPTVSQSR IHPNTQEKYNCATSRI R S P E K Y 1 1 1 0 0 3 4 1 1 1 0 1 0 0 2 6 2 0 0 1 0 0 25 1 2712.2587 Q2M3C7 Q2M3C7 862 886 SPHKAP A-kinase anchor protein SPHKAP yes yes 3 0.027105 47.089 By matching By MS/MS 1 1 21581000 9866200 11715000 5837 2180 6645 14642;14643 14193 14193 4335;4336 1 SPVIGSEVFLPNSNHVASGAGEAEER LDGPPSPRSPVIGSEV GAGEAEERVVVISSSE R S P E R V 3 1 2 0 0 0 4 3 1 1 1 0 0 1 2 4 0 0 0 3 0 0 26 0 2652.278 H3BVD2;P29590 H3BVD2 174 199 PML Protein PML yes no 3 0.0005545 66.399 By MS/MS 1 8562600 8562600 0 5838 1257 6646 14644 14194 14194 2337 1 SPVPKSPVEEK VEKPEKAKSPVPKSPV PKSPVEEKGKSPVSKS K S P E K G 0 0 0 0 0 0 2 0 0 0 0 2 0 0 3 2 0 0 0 2 0 0 11 1 1195.6449 E7ESP9;P07197 E7ESP9 615 625 NEFM Neurofilament medium polypeptide yes no 2;3 0.0020072 106.18 By MS/MS By MS/MS 2 1 29376000 25917000 3459800 5839 817 6647 14645;14646;14647 14195;14196 14195 1480 2 SPVPSPGSSSPQLQVK PLLLVGDRSPVPSPGS SSPQLQVKSSCKENPF R S P V K S 0 0 0 0 0 2 0 1 0 0 1 1 0 0 4 5 0 0 0 2 0 0 16 0 1593.8362 Q8N3F8 Q8N3F8 612 627 MICALL1 MICAL-like protein 1 yes yes 2 1.4271E-63 196.45 By MS/MS By MS/MS 1 1 80715000 38592000 42123000 5840 2466 6648 14648;14649 14197;14198;14199 14199 5039;5040 3 SPVQLEEAPFSR SPPHPSPKSPVQLEEA LEEAPFSRRFGLLKTG K S P S R R 1 1 0 0 0 1 2 0 0 0 1 0 0 1 2 2 0 0 0 1 0 0 12 0 1358.683 Q9BZL4 Q9BZL4 407 418 PPP1R12C Protein phosphatase 1 regulatory subunit 12C yes yes 2 0.001318 93.494 By MS/MS By MS/MS 1 1 4575200 2822200 1753000 5841 2785 6649 14650;14651 14200;14201;14202 14201 5792 3 SPVSPLAAQGIPLPAQLTK MSRLSLTRSPVSPLAA PLPAQLTKSNAPVHID R S P T K S 3 0 0 0 0 2 0 1 0 1 3 1 0 0 4 2 1 0 0 1 0 0 19 0 1887.0829 K7EIF1;K7EPF0;K7EQS3;K7EM48;K7EN63;Q96SI1 K7EIF1 35 53 KCTD15 BTB/POZ domain-containing protein KCTD15 yes no 2 0.00025811 116.85 By matching By MS/MS 1 1 21056000 11384000 9671600 5842 1366 6650 14652;14653 14203 14203 2535 1 SPVSTRPLPSASQK APAAVGRRSPVSTRPL PLPSASQKAGENQEHR R S P Q K A 1 1 0 0 0 1 0 0 0 0 1 1 0 0 3 4 1 0 0 1 0 0 14 1 1453.7889 Q8ND56 Q8ND56 216 229 LSM14A Protein LSM14 homolog A yes yes 2;3 0.0029633 106.6 By MS/MS By matching 2 1 433620000 370030000 63592000 5843 2506 6651 14654;14655;14656 14204;14205 14204 5117 2 SPVVSGDTSPR HGAEIVYKSPVVSGDT VSGDTSPRHLSNVSST K S P P R H 0 1 0 1 0 0 0 1 0 0 0 0 0 0 2 3 1 0 0 2 0 0 11 0 1100.5462 I3L170;A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636 I3L170 296 306 MAPT Microtubule-associated protein;Microtubule-associated protein tau yes no 2 0.0040494 101.53 By MS/MS By MS/MS 1 1 48875000 25330000 23544000 5844 356 6652 14657;14658 14206;14207 14207 639;6934 2 SQACATLYLLMR SSSMDVTRSQACATLY ATLYLLMRFSFGATSN R S Q M R F 2 1 0 0 1 1 0 0 0 0 3 0 1 0 0 1 1 0 1 0 0 0 12 0 1425.7108 A2A369;Q8NF50 A2A369 991 1002 DOCK8 Dedicator of cytokinesis protein 8 yes no 2 0.019012 63.181 By matching By MS/MS 1 1 26502000 13201000 13301000 5845 451 6653 14659;14660 14208 14208 8049 1 SQAKPGTPGGTGGPAPQY LASVQHMKSQAKPGTP TGGPAPQY________ K S Q Q Y - 2 0 0 0 0 2 0 5 0 0 0 1 0 0 4 1 2 0 1 0 0 0 18 1 1669.806 P54760;Q96L35 P54760 970 987 EPHB4 Ephrin type-B receptor 4;Receptor protein-tyrosine kinase yes no 2 7.4239E-05 98.253 By MS/MS By matching 1 1 45475000 23805000 21670000 5846 1904 6654 14661;14662 14209 14209 8300 1 SQANGAGALSYVSPNTSK REQYDEKRSQANGAGA YVSPNTSKCPVTIPED R S Q S K C 3 0 2 0 0 1 0 2 0 0 1 1 0 0 1 4 1 0 1 1 0 0 18 0 1750.8486 O95453;F5H1Z4 O95453 151 168 PARN Poly(A)-specific ribonuclease PARN yes no 2 3.0123E-23 158.5 By MS/MS By MS/MS 3 3 42472000 20065000 22407000 5847 1597 6655;6656 14663;14664;14665;14666;14667;14668 14210;14211;14212;14213;14214;14215 14212 65 3029;3030;7357 6 SQASMVINSDTDDEEEVSAALTLAHLK PQAVPLEKSQASMVIN ALTLAHLKESQPAIWN K S Q L K E 4 0 1 3 0 1 3 0 1 1 3 1 1 0 0 4 2 0 0 2 0 0 27 0 2873.36 Q14676 Q14676 394 420 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 7.7939E-08 98.377 By MS/MS By MS/MS 1 1 19107000 5675100 13432000 5848 2098 6657 14669;14670 14216;14217;14218;14219 14218 836 4145;7579 4 SQDADSPGSSGAPENLTFK DAKEKRSKSQDADSPG APENLTFKERQRLFSQ K S Q F K E 2 0 1 2 0 1 1 2 0 0 1 1 0 1 2 4 1 0 0 0 0 0 19 0 1906.8545 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1731 1749 MLLT4 Afadin yes no 2 7.08E-05 123.43 By MS/MS By MS/MS 2 2 78811000 38046000 40765000 5849 494 6658;6659 14671;14672;14673;14674 14220;14221;14222;14223 14220 903;904 4 SQDATFSPGSEQAEK SPRRMMTRSQDATFSP PGSEQAEKSPGPIVSR R S Q E K S 2 0 0 1 0 2 2 1 0 0 0 1 0 1 1 3 1 0 0 0 0 0 15 0 1580.6954 C9J0I9;Q86WB0 C9J0I9 286 300 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.015418 67.449 By matching By MS/MS 1 1 22374000 12899000 9474900 5850 624 6660 14675;14676 14224 14224 1158;1159 1 SQDATFSPGSEQAEKSPGPIVSR SPRRMMTRSQDATFSP SPGPIVSRTRSWDSSS R S Q S R T 2 1 0 1 0 2 2 2 0 1 0 1 0 1 3 5 1 0 0 1 0 0 23 1 2374.1401 C9J0I9;Q86WB0 C9J0I9 286 308 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 4.1084E-26 157.14 By MS/MS By MS/MS 3 3 710240000 378430000 331820000 5851 624 6661;6662 14677;14678;14679;14680;14681;14682 14225;14226;14227;14228;14229;14230;14231 14225 1158;1159;1160 7 SQDQDSEVNELSR EDRASEPKSQDQDSEV SEVNELSRGPTSSPCE K S Q S R G 0 1 1 2 0 2 2 0 0 0 1 0 0 0 0 3 0 0 0 1 0 0 13 0 1505.6594 E7ERS3;Q86VM9 E7ERS3 78 90 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 9.1514E-10 137.39 By MS/MS By MS/MS 1 1 35605000 17102000 18503000 5852 811 6663 14683;14684 14232;14233 14233 1469 2 SQDSYPGSPSLSPR SLSSRSPKSQDSYPGS GSPSLSPRHGPSSSHM K S Q P R H 0 1 0 1 0 1 0 1 0 0 1 0 0 0 3 5 0 0 1 0 0 0 14 0 1476.6845 A0A0D9SEU5;R4GMX8;Q6VN20 A0A0D9SEU5 358 371 RANBP10 Ran-binding protein 10 yes no 2 3.9663E-07 131.42 By MS/MS By MS/MS 1 2 20941000 11072000 9868900 5853 335 6664;6665 14685;14686;14687 14234;14235;14236 14234 592;593;594;595 3 SQEEPKDTFEHDPSESIDEFNK EESPLKSKSQEEPKDT ESIDEFNKSSATSGDI K S Q N K S 0 0 1 3 0 1 5 0 1 1 0 2 0 2 2 3 1 0 0 0 0 0 22 1 2607.1249 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 183 204 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 0.01502 59.537 By MS/MS By MS/MS 2 2 89096000 45319000 43777000 5854 2947;888 6666 14688;14689;14690;14691 14237;14238;14239 14237 1652;1653 2 SQEIEELER SSEAGSSRSQEIEELE QEIEELERFIDSYVLE R S Q E R F 0 1 0 0 0 1 4 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1131.5408 K7EQS5;K7EQS9;K7EPK6;K7EK08;O43310 K7EQS5 18 26 CTIF CBP80/20-dependent translation initiation factor yes no 2 0.0046934 96.229 By MS/MS By MS/MS 1 1 16933000 9209100 7723900 5855 1377 6667 14692;14693 14240;14241 14240 2544 2 SQEPIPDDQKVSDDDKEK EERASLLKSQEPIPDD VSDDDKEKGEGALPTG K S Q E K G 0 0 0 5 0 2 2 0 0 1 0 3 0 0 2 2 0 0 0 1 0 0 18 2 2071.9546 Q86UE4;E5RJU9;H0YBJ8 Q86UE4 415 432 MTDH Protein LYRIC yes no 3 0.000424 112.82 By MS/MS By MS/MS 1 1 79043000 39121000 39922000 5856 2401 6668 14694;14695 14242;14243 14243 4900 2 SQFYFLTKSQSLLTFSTK EAYQWLNRSQFYFLTK SLLTFSTKSPEEKLTP R S Q T K S 0 0 0 0 0 2 0 0 0 0 3 2 0 3 0 4 3 0 1 0 0 0 18 1 2125.1096 Q8IWA0 Q8IWA0 654 671 WDR75 WD repeat-containing protein 75 yes yes 3 0.031954 41.423 By MS/MS 1 0 0 0 5857 2427 6669 14696 14244 14244 1 SQGSRDPPK ECRDIIAKSQGSRDPP QGSRDPPKVEEAHYIT K S Q P K V 0 1 0 1 0 1 0 1 0 0 0 1 0 0 2 2 0 0 0 0 0 0 9 1 970.48321 D6RIA3 D6RIA3 353 361 LOC285556 yes yes 1 0.011844 63.565 By MS/MS By MS/MS 2 2 268550000 125800000 142750000 5858 767 6670 14697;14698;14699;14700 14245;14246;14247;14248 14248 1375;1376 4 SQGSRNSEK QMAGDGCRSQGSRNSE QGSRNSEKASAPLSQS R S Q E K A 0 1 1 0 0 1 1 1 0 0 0 1 0 0 0 3 0 0 0 0 0 0 9 1 991.46829 H0YHR2;F8VXI8;F8VX10;Q9H9L4 H0YHR2 175 183 KANSL2 KAT8 regulatory NSL complex subunit 2 yes no 1 0.018697 84.498 By matching By MS/MS 1 1 12354000 5914700 6439100 5859 1025 6671 14701;14702 14249 14249 1919 0 SQIFSTASDNQPTVTIK NTVVPTKKSQIFSTAS NQPTVTIKVYEGERPL K S Q I K V 1 0 1 1 0 2 0 0 0 2 0 1 0 1 1 3 3 0 0 1 0 0 17 0 1835.9265 P11021 P11021 448 464 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.030852 76.868 By matching By MS/MS 1 1 6370200 3720900 2649300 5860 1679 6672 14703;14704 14250 14250 0 SQLLTWLCSLLLLSTLR SFCVAQFRSQLLTWLC LLLLSTLRLQGVEEVK R S Q L R L 0 1 0 0 1 1 0 0 0 0 8 0 0 0 0 3 2 1 0 0 0 0 17 0 2016.1442 Q5VTY9 Q5VTY9 132 148 HHAT Protein-cysteine N-palmitoyltransferase HHAT yes yes 2 0.0089825 66.023 By MS/MS 1 4362500 0 4362500 5861 2267 6673 14705 14251 14251 4552;7654 0 SQLNELCRFSRDLSTYSGK EPRTEDLKSQLNELCR DLSTYSGKVSGLIKEY K S Q G K V 0 2 1 1 1 1 1 1 0 0 3 1 0 1 0 4 1 0 1 0 0 0 19 2 2260.0906 Q8NF91;E7ENN3;A0A0C4DG40;A0A0C4DH48 Q8NF91 3021 3039 SYNE1 Nesprin-1 yes no 3 0.030896 46.663 By MS/MS 1 0 0 0 5862 2516 6674 14706 14252 14252 1 SQLPTLEQDGGTQNPVSSPGMSQELR KCQELALRSQLPTLEQ PGMSQELRTMTTNSSD R S Q L R T 0 1 1 1 0 4 2 3 0 0 3 0 1 0 3 4 2 0 0 1 0 0 26 0 2755.3083 P46937;H0YCI3 P46937 350 375 YAP1 Transcriptional coactivator YAP1 yes no 2;3 3.1614E-07 94.891 By MS/MS By MS/MS 3 2 125290000 67630000 57664000 5863 1841 6675;6676 14707;14708;14709;14710;14711 14253;14254;14255;14256;14257;14258 14254 712 3530;3531 5 SQLPTWAPQLSDACPQPPPPPEDK S Q D K 2 0 0 2 1 3 1 0 0 0 2 1 0 0 8 2 1 1 0 0 0 0 24 0 2655.2639 REV__F5H2R8 yes yes 3 0.015524 45.011 By MS/MS By matching 2 1 94116000 65544000 28572000 + 5864 3182 6677 14712;14713;14714 14259 14259 6777 1 SQQQPTPVTPK YSTRRVTRSQQQPTPV QPTPVTPKKYPLRQTR R S Q P K K 0 0 0 0 0 3 0 0 0 0 0 1 0 0 3 1 2 0 0 1 0 0 11 0 1209.6354 O95251 O95251 80 90 KAT7 Histone acetyltransferase KAT7 yes yes 2 0.0051775 92.781 By MS/MS By MS/MS 1 2 100710000 58153000 42562000 5865 1587 6678 14715;14716;14717 14260;14261 14261 7355 2 SQQSSGRTSGSDDPGICSNTDSTQAQVLLGK KSDTEPQKSQQSSGRT QAQVLLGKKRLLKAET K S Q G K K 1 1 1 3 1 4 0 4 0 1 2 1 0 0 1 7 3 0 0 1 0 0 31 1 3180.4589 Q8NDI1 Q8NDI1 656 686 EHBP1 EH domain-binding protein 1 yes yes 3 0.0087513 48.41 By MS/MS 1 9234500 0 9234500 5866 2509 6679 14718 14262 14262 5128 1 SQRYSGAYGASVSDEELKR ESSPSGSKSQRYSGAY VSDEELKRRVAEELAL K S Q K R R 2 2 0 1 0 1 2 2 0 0 1 1 0 0 0 4 0 0 2 1 0 0 19 2 2102.0029 C9JRZ6;F8WAR4;Q9NX63 C9JRZ6 46 64 CHCHD3 MICOS complex subunit MIC19 yes no 3 0.013616 62.468 By MS/MS By matching 1 1 36329000 8086600 28242000 5867 691 6680 14719;14720 14263 14263 1277 1 SQSESSDEVTELDLSHGK RQRSRLLRSQSESSDE ELDLSHGKKDAFVLEI R S Q G K K 0 0 0 2 0 1 3 1 1 0 2 1 0 0 0 5 1 0 0 1 0 0 18 0 1946.8705 Q86YS7 Q86YS7 657 674 C2CD5 C2 domain-containing protein 5 yes yes 2 0.00016101 118.84 By MS/MS By MS/MS 1 1 21377000 12702000 8674900 5868 2422 6681 14721;14722 14264;14265 14264 4951;4952 2 SQSESSDEVTELDLSHGKK RQRSRLLRSQSESSDE LDLSHGKKDAFVLEID R S Q K K D 0 0 0 2 0 1 3 1 1 0 2 2 0 0 0 5 1 0 0 1 0 0 19 1 2074.9655 Q86YS7 Q86YS7 657 675 C2CD5 C2 domain-containing protein 5 yes yes 3 0.0088699 61.256 By MS/MS By matching 1 1 26630000 15441000 11189000 5869 2422 6682 14723;14724 14266 14266 4951;4952 1 SQSEYKPDTPQSGLEYSGIQELEDR DRNSILPKSQSEYKPD GIQELEDRRSQQRFQF K S Q D R R 0 1 0 2 0 3 4 2 0 1 2 1 0 0 2 4 1 0 2 0 0 0 25 1 2855.3097 Q16513 Q16513 620 644 PKN2 Serine/threonine-protein kinase N2 yes yes 3 1.0135E-09 129.66 By MS/MS By MS/MS 1 1 86092000 35541000 50551000 5870 2163 6683 14725;14726 14267;14268 14267 4305;8357 2 SQSEYKPDTPQSGLEYSGIQELEDRR DRNSILPKSQSEYKPD IQELEDRRSQQRFQFN K S Q R R S 0 2 0 2 0 3 4 2 0 1 2 1 0 0 2 4 1 0 2 0 0 0 26 2 3011.4108 Q16513 Q16513 620 645 PKN2 Serine/threonine-protein kinase N2 yes yes 4 0.018599 46.403 By MS/MS By matching 1 1 19415000 8710100 10705000 5871 2163 6684 14727;14728 14269 14269 4305;8357 1 SQSFFAAAR ERRRPQSRSQSFFAAA QSFFAAARAAVSAFPT R S Q A R A 3 1 0 0 0 1 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 9 0 983.48248 O14654 O14654 1089 1097 IRS4 Insulin receptor substrate 4 yes yes 2 0.0041708 90.827 By MS/MS By MS/MS 2 2 203290000 103020000 100270000 5872 1453 6685 14729;14730;14731;14732 14270;14271;14272;14273 14271 2687;2688 4 SQSGEDESMNQPGPIK SIIKGRYRSQSGEDES MNQPGPIKTRLAISQS R S Q I K T 0 0 1 1 0 2 2 2 0 1 0 1 1 0 2 3 0 0 0 0 0 0 16 0 1702.7468 A0A0C4DG33;O43933 A0A0C4DG33 1152 1167 PEX1 Peroxisome biogenesis factor 1 yes no 2 0.0001259 106.87 By MS/MS By MS/MS 1 1 11978000 5598600 6379900 5873 308 6686 14733;14734 14274;14275 14274 121 535;536 2 SQSGTLDGESAAWSASGEDSR LSPEVKARSQSGTLDG SASGEDSRGQPEGPLP R S Q S R G 3 1 0 2 0 1 2 3 0 0 1 0 0 0 0 6 1 1 0 0 0 0 21 0 2096.8883 H3BMQ0;P49815;H3BQK4 H3BMQ0 1362 1382 TSC2 Tuberin yes no 2 0.00020338 103.5 By MS/MS By MS/MS 1 1 13427000 7060000 6367100 5874 1230 6687 14735;14736 14276;14277 14276 2293;2294 2 SQSIEQESQEK SDKHDRRRSQSIEQES IEQESQEKQHKNKDET R S Q E K Q 0 0 0 0 0 3 3 0 0 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1291.5892 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 416 426 PRPF38B Pre-mRNA-splicing factor 38B yes no 2 9.9052E-07 145.81 By MS/MS By MS/MS 3 3 54630000 28418000 26212000 5875 223 6688 14737;14738;14739;14740;14741;14742 14278;14279;14280;14281;14282 14280 394;395 4 SQSLPGADSLLAK AISAVFGRSQSLPGAD GADSLLAKPIDKQHTD R S Q A K P 2 0 0 1 0 1 0 1 0 0 3 1 0 0 1 3 0 0 0 0 0 0 13 0 1285.6878 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1797 1809 TRRAP Transformation/transcription domain-associated protein yes no 2 0.0024926 86.772 By MS/MS By MS/MS 1 1 33673000 18669000 15005000 5876 933 6689 14743;14744 14283;14284 14283 1750 2 SQSLPGADSLLAKPIDK AISAVFGRSQSLPGAD LLAKPIDKQHTDTVVN R S Q D K Q 2 0 0 2 0 1 0 1 0 1 3 2 0 0 2 3 0 0 0 0 0 0 17 1 1738.9465 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1797 1813 TRRAP Transformation/transcription domain-associated protein yes no 3 0.00078715 81.226 By MS/MS By MS/MS 1 1 51279000 33032000 18247000 5877 933 6690 14745;14746 14285;14286;14287 14285 1750 3 SQSLPHSATVTLGGTSDPSTLSSSALSER SDAAPLQRSQSLPHSA SSSALSEREASRLDKF R S Q E R E 2 1 0 1 0 1 1 2 1 0 4 0 0 0 2 9 4 0 0 1 0 0 29 0 2872.405 F8WDP1;A0A0A0MRY0;Q8WUA7 F8WDP1 165 193 TBC1D22A TBC1 domain family member 22A yes no 3 3.0733E-11 119.96 By MS/MS By MS/MS 1 1 107290000 50119000 57171000 5878 236 6691 14747;14748 14288;14289 14288 413 2 SQSLPNSLDYTQTSDPGR KRTQRHGRSQSLPNSL TQTSDPGRHVMLLRAV R S Q G R H 0 1 1 2 0 2 0 1 0 0 2 0 0 0 2 4 2 0 1 0 0 0 18 0 1964.9076 H0YNE5;H0YLG5;Q96TC7 H0YNE5 44 61 RMDN3 Regulator of microtubule dynamics protein 3 yes no 2;3 4.8287E-06 125.79 By MS/MS By MS/MS 2 2 166030000 81965000 84063000 5879 1211 6692 14749;14750;14751;14752 14290;14291;14292;14293;14294 14291 2253 5 SQSLPTTLLSPVR KAGYPLRRSQSLPTTL TTLLSPVRVVSSVNVR R S Q V R V 0 1 0 0 0 1 0 0 0 0 3 0 0 0 2 3 2 0 0 1 0 0 13 0 1397.7878 E9PHV5;P28290;E7EUL7 E9PHV5 737 749 SSFA2 Sperm-specific antigen 2 yes no 2 0.00073383 102.39 By MS/MS By MS/MS 4 4 85756000 47791000 37965000 5880 880 6693;6694 14753;14754;14755;14756;14757;14758;14759;14760 14295;14296;14297;14298;14299;14300;14301 14301 1634;1635;1636 6 SQSMDIDGVSCEK TQSQSLSRSQSMDIDG IDGVSCEKSMSQVDVD R S Q E K S 0 0 0 2 1 1 1 1 0 1 0 1 1 0 0 3 0 0 0 1 0 0 13 0 1454.6017 O95155 O95155 103 115 UBE4B Ubiquitin conjugation factor E4 B yes yes 2 1.6891E-15 160.87 By MS/MS By MS/MS 2 2 54697000 28263000 26434000 5881 1581 6695;6696 14761;14762;14763;14764 14302;14303;14304;14305;14306;14307 14303 573 2992 6 SQSNPILGSPFFSHFDGQDSYAAAVR ASNTSLQRSQSNPILG DSYAAAVRRPQVPIKY R S Q V R R 3 1 1 2 0 2 0 2 1 1 1 0 0 3 2 5 0 0 1 1 0 0 26 0 2797.3096 Q9NYL2 Q9NYL2 591 616 ZAK Mitogen-activated protein kinase kinase kinase MLT yes yes 3 2.4103E-05 78.757 By MS/MS By MS/MS 1 1 21697000 11326000 10370000 5882 2949 6697 14765;14766 14308;14309;14310 14310 6219 3 SQSPAASDCSSSSSSASLPSSGR PASHGPERSQSPAASD ASLPSSGRSSLGSHQL R S Q G R S 3 1 0 1 1 1 0 1 0 0 1 0 0 0 2 12 0 0 0 0 0 0 23 0 2198.9346 O95817;C9JFK9 O95817 171 193 BAG3 BAG family molecular chaperone regulator 3 yes no 2;3 1.394E-08 134.56 By MS/MS By MS/MS 2 2 73468000 42604000 30864000 5883 1609 6698 14767;14768;14769;14770 14311;14312;14313;14314 14312 3047;3048 4 SQSPHYFR FIRSKIYRSQSPHYFR SQSPHYFRSGRGEGPG R S Q F R S 0 1 0 0 0 1 0 0 1 0 0 0 0 1 1 2 0 0 1 0 0 0 8 0 1020.4777 Q9UKJ3 Q9UKJ3 1033 1040 GPATCH8 G patch domain-containing protein 8 yes yes 2;3 0.015054 62.463 By MS/MS By MS/MS 2 2 38184000 22365000 15819000 5884 3025 6699 14771;14772;14773;14774 14315;14316;14317 14316 6378 3 SQSPINCIRPSVLGPLK TTRFTTRRSQSPINCI PSVLGPLKRKCEMETE R S Q L K R 0 1 1 0 1 1 0 1 0 2 2 1 0 0 3 3 0 0 0 1 0 0 17 1 1865.0193 Q96E09 Q96E09 187 203 FAM122A Protein FAM122A yes yes 3 0.010975 57.496 By MS/MS By matching 1 1 12698000 6371800 6325800 5885 2640 6700 14775;14776 14318 14318 5443 1 SQSSDTEQQSPTSGGGK RSSNPPARSQSSDTEQ SPTSGGGKVAPAQPSE R S Q G K V 0 0 0 1 0 3 1 3 0 0 0 1 0 0 1 5 2 0 0 0 0 0 17 0 1679.7235 E7EX17;P23588 E7EX17 500 516 EIF4B Eukaryotic translation initiation factor 4B yes no 2 0.00011316 120.9 By MS/MS By MS/MS 2 3 80461000 29958000 50503000 5886 837 6701 14777;14778;14779;14780;14781 14319;14320;14321;14322;14323;14324;14325;14326 14325 1562;1563 8 SQSSEGVSSLSSSPSNSLETQSQSLSR GASGVAHRSQSSEGVS TQSQSLSRSQSMDIDG R S Q S R S 0 1 1 0 0 3 2 1 0 0 3 0 0 0 1 13 1 0 0 1 0 0 27 0 2755.2744 O95155 O95155 76 102 UBE4B Ubiquitin conjugation factor E4 B yes yes 3 0.0086469 48.532 By MS/MS By matching 1 1 42776000 25295000 17480000 5887 1581 6702 14782;14783 14327 14327 2993;2994 1 SQSSHSYDDSTLPLIDR VNLNNASRSQSSHSYD STLPLIDRNQKSDKKP R S Q D R N 0 1 0 3 0 1 0 0 1 1 2 0 0 0 1 5 1 0 1 0 0 0 17 0 1919.8861 C9JZR2;O60716;H0YC95 C9JZR2 859 875 CTNND1 Catenin delta-1 yes no 2;3 1.2925E-10 137.61 By MS/MS By MS/MS 5 5 82018000 41868000 40149000 5888 706 6703;6704 14784;14785;14786;14787;14788;14789;14790;14791;14792;14793 14328;14329;14330;14331;14332;14333;14334;14335 14329 1305;1306;1307;8107 8 SQSSSLLDMGNMSASDLDVADR VQSSGNRRSQSSSLLD SDLDVADRTKFDKIFE R S Q D R T 2 1 1 4 0 1 0 1 0 0 3 0 2 0 0 6 0 0 0 1 0 0 22 0 2298.0104 Q9NV70 Q9NV70 487 508 EXOC1 Exocyst complex component 1 yes yes 3 0.00080454 70.771 By MS/MS By MS/MS 1 2 22862000 10910000 11952000 5889 2923 6705 14794;14795;14796 14336;14337 14336 1159;1160 6175;6176 2 SQSTTSDVPANYK KLRVKPERSQSTTSDV SDVPANYKVIKSSSDA R S Q Y K V 1 0 1 1 0 1 0 0 0 0 0 1 0 0 1 3 2 0 1 1 0 0 13 0 1396.647 Q9NU19 Q9NU19 114 126 TBC1D22B TBC1 domain family member 22B yes yes 2 1.2401E-06 127.71 By MS/MS By MS/MS 1 1 26074000 13870000 12203000 5890 2919 6706 14797;14798 14338;14339 14339 6168 2 SQSWEER GGGREMHRSQSWEERG RSQSWEERGDRRFEKP R S Q E R G 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 7 0 920.39881 I1E4Y6;Q6Y7W6;E7ESB6 I1E4Y6 158 164 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 0.031993 70.552 By MS/MS By matching 1 1 47464000 25986000 21478000 5891 1298 6707 14799;14800 14340 14340 1 SQTPPGVATPPIPK KSPGSAGRSQTPPGVA VATPPIPKITIQIPKG R S Q P K I 1 0 0 0 0 1 0 1 0 1 0 1 0 0 5 1 2 0 0 1 0 0 14 0 1388.7664 Q15648 Q15648 1049 1062 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.0033055 91.616 By MS/MS By MS/MS 1 1 118710000 66015000 52694000 5892 2148 6708 14801;14802 14341;14342 14342 7604 2 SQTTTERDSDTDVEEEELPVENR QRVVLLQRSQTTTERD EELPVENREAVLKDHT R S Q N R E 0 2 1 3 0 1 6 0 0 0 1 0 0 0 1 2 4 0 0 2 0 0 23 1 2678.1791 Q14676 Q14676 445 467 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2;3 0.00043864 109.14 By MS/MS By MS/MS 2 2 303550000 150840000 152710000 5893 2098 6709 14803;14804;14805;14806 14343;14344;14345;14346;14347 14343 4146;7580;7581;7582 5 SQTVPSPTINNSGQYSR QTLNFSSRSQTVPSPT NNSGQYSRYPYSNLNQ R S Q S R Y 0 1 2 0 0 2 0 1 0 1 0 0 0 0 2 4 2 0 1 1 0 0 17 0 1834.881 Q9P2D1 Q9P2D1 296 312 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 2 0.0031978 78.228 By MS/MS 1 6253900 6253900 0 5894 2978 6710 14807 14348 14348 6272 1 SQWESPSPTPSYR SGYGSSRRSQWESPSP PSPTPSYRDSERSHRL R S Q Y R D 0 1 0 0 0 1 1 0 0 0 0 0 0 0 3 4 1 1 1 0 0 0 13 0 1520.6896 Q92620 Q92620 228 240 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 2 0.013211 79.771 By MS/MS By matching 1 1 9846300 4514500 5331800 5895 2589 6711 14808;14809 14349 14349 7758 1 SRADLTAEMISAPLGDFR SSVHSKRRSRADLTAE SAPLGDFRHTMHVGRA R S R F R H 3 2 0 2 0 0 1 1 0 1 2 0 1 1 1 2 1 0 0 0 0 0 18 1 1948.9677 Q9H3Q1;J3KRZ9;J3QQS6;J3QR93 Q9H3Q1 18 35 CDC42EP4 Cdc42 effector protein 4 yes no 3 0.00010599 99.371 By MS/MS By MS/MS 1 1 18245000 9553900 8691200 5896 2828 6712 14810;14811 14350;14351 14350 1127 5934;7851 2 SRAITQGR DQARMGCRSRAITQGR SRAITQGRRVTVMRGH R S R G R R 1 2 0 0 0 1 0 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 8 1 887.49371 J3KNW1;Q4VC44;I3L4V9;I3L188 J3KNW1 191 198 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 yes no 1 0.016732 52.403 By MS/MS 1 1712200 1712200 0 5897 1323 6713 14812 14352 14352 2451 1 SRCNTSSGSESENSNREYR LKQRRRSRSRCNTSSG ENSNREYRKKRNRIRQ R S R Y R K 0 3 3 0 1 0 3 1 0 0 0 0 0 0 0 6 1 0 1 0 0 0 19 2 2218.9257 Q9HCS5 Q9HCS5 478 496 EPB41L4A Band 4.1-like protein 4A yes yes 2 0.027189 56.286 By MS/MS 1 0 0 0 5898 2881 6714 14813 14353 14353 6068;6069;6070 1 SRDDLYDQDDSRDFPR AYMPPRSRSRDDLYDQ DDSRDFPRSRDPHYDD R S R P R S 0 3 0 6 0 1 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 0 16 2 1998.8668 S4R3V8;Q86X29 S4R3V8 482 497 LSR Lipolysis-stimulated lipoprotein receptor yes no 3 9.8036E-05 105.63 By MS/MS By MS/MS 1 1 43279000 16683000 26596000 5899 2416 6715 14814;14815 14354;14355 14355 8384 2 SRDPHYDDFR DDSRDFPRSRDPHYDD DPHYDDFRSRERPPAD R S R F R S 0 2 0 3 0 0 0 0 1 0 0 0 0 1 1 1 0 0 1 0 0 0 10 1 1306.5691 S4R3V8;Q86X29 S4R3V8 498 507 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.020421 54.066 By MS/MS By matching 1 1 10206000 5908900 4296800 5900 2416 6716 14816;14817 14356 14356 8385 1 SREDLSAQPVQTK SSKRNLRKSREDLSAQ SAQPVQTKFPAYERVV K S R T K F 1 1 0 1 0 2 1 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 13 1 1457.7474 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 605 617 TJP1 Tight junction protein ZO-1 yes no 2 0.015519 75.911 By MS/MS By matching 1 1 16633000 8792200 7840900 5901 156 6717 14818;14819 14357 14357 255 1 SREEDPTLTEEEISAMYSSVNKPGQLVNK RFSSLSYKSREEDPTL KPGQLVNKSGQSLTVP K S R N K S 1 1 2 1 0 1 5 1 0 1 2 2 1 0 2 4 2 0 1 2 0 0 29 2 3250.5664 Q9NWQ8 Q9NWQ8 301 329 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 3;4 2.6694E-07 85.157 By MS/MS By MS/MS 3 3 66997000 40308000 26689000 5902 2936 6718;6719 14820;14821;14822;14823;14824;14825 14358;14359;14360;14361;14362;14363;14364;14365 14365 1167 6192;8477 8 SRFEQFCHLR EPGGWLRRSRFEQFCH FEQFCHLRAIGDGEDE R S R L R A 0 2 0 0 1 1 1 0 1 0 1 0 0 2 0 1 0 0 0 0 0 0 10 1 1378.6564 O14654 O14654 375 384 IRS4 Insulin receptor substrate 4 yes yes 3 0.0068674 64.244 By matching By MS/MS 1 1 16514000 8875700 7638800 5903 1453 6720 14826;14827 14366 14366 2689 1 SRFNIINMTFPTK TVISPRLRSRFNIINM INMTFPTKSQIIRIFG R S R T K S 0 1 2 0 0 0 0 0 0 2 0 1 1 2 1 1 2 0 0 0 0 0 13 1 1567.8181 Q9P225 Q9P225 2547 2559 DNAH2 Dynein heavy chain 2, axonemal yes yes 3 0.025219 49.28 By MS/MS By MS/MS 1 1 42414000 14154000 28260000 5904 2970 6721 14828;14829 14367;14368 14368 6258 1 SRGLNPVSAR S R A R 1 2 1 0 0 0 0 1 0 0 1 0 0 0 1 2 0 0 0 1 0 0 10 1 1055.5836 REV__E9PNJ0 yes no 2 0.011256 59.68 By MS/MS 1 68929000 0 68929000 + 5905 3180 6722 14830 14369 14369 6775;6776 1 SRGSTNLFSK ATPLSQTRSRGSTNLF GSTNLFSKLTSKLTRR R S R S K L 0 1 1 0 0 0 0 1 0 0 1 1 0 1 0 3 1 0 0 0 0 0 10 1 1095.5673 A2SY06;H0YIY6;A0A0A0MST9;A0A0A0MQR8;A0A0A0MSZ1;A0A0A0MT23;J3KNR0;P27448 A2SY06 185 194 MARK3 MAP/microtubule affinity-regulating kinase 3 yes no 2 0.0057227 87.831 By MS/MS By matching 1 1 14461000 8975200 5486000 5906 187 6723 14831;14832 14370 14370 338 1 SRIPSPLQPEMQGTPDDEPSEPEPSPSTLIYR GPPGDACRSRIPSPLQ SPSTLIYRNMQRWKRI R S R Y R N 0 2 0 2 0 2 4 1 0 2 2 0 1 0 8 5 2 0 1 0 0 0 32 1 3549.6933 Q96GY3;K7EMY4 Q96GY3 178 209 LIN37 Protein lin-37 homolog yes no 3 0.0017244 57.192 By MS/MS By MS/MS 1 1 29944000 11980000 17964000 5907 2659 6724 14833;14834 14371;14372 14372 1059 5482 2 SRITQLVSDQANHVLAR QETVDALRSRITQLVS QANHVLARAGEGNEEI R S R A R A 2 2 1 1 0 2 0 0 1 1 2 0 0 0 0 2 1 0 0 2 0 0 17 1 1907.0337 Q7Z4S6;A0A1B0GV47;H0YIM7 Q7Z4S6 451 467 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 2 0.029191 52.569 By MS/MS 1 0 0 0 5908 2386 6725 14835 14373 14373 1 SRLSAIEIDIPVVSHTT YSQPYSARSRLSAIEI IPVVSHTT________ R S R T T - 1 1 0 1 0 0 1 0 1 3 1 0 0 0 1 3 2 0 0 2 0 0 17 1 1836.9945 P56749 P56749 228 244 CLDN12 Claudin-12 yes yes 2;3 2.5693E-06 130.4 By MS/MS By MS/MS 2 2 38650000 22077000 16573000 5909 1918 6726 14836;14837;14838;14839 14374;14375;14376;14377;14378 14374 3711;3712 5 SRLTTTSASR PSWSAVSRSRLTTTSA LTTTSASRVQVILLPQ R S R S R V 1 2 0 0 0 0 0 0 0 0 1 0 0 0 0 3 3 0 0 0 0 0 10 1 1078.5731 A0A087WUU4 A0A087WUU4 33 42 CCL16 yes yes 2 0.028197 43.798 By MS/MS 1 0 0 0 5910 61 6727 14840 14379 14379 110;111 1 SRMCEQRFSHEASQTYQR EMVDSGPRSRMCEQRF EASQTYQRPYHISPVE R S R Q R P 1 3 0 0 1 3 2 0 1 0 0 0 1 1 0 3 1 0 1 0 0 0 18 2 2300.0175 Q5H9K5 Q5H9K5 349 366 ZMAT1 Zinc finger matrin-type protein 1 yes yes 3 0.02113 59.513 By MS/MS 1 0 0 0 5911 2216 6728 14841 14380 14380 4430 1 SRPALSPLGDIDFCPPNPGPDGPR PDLVSSCRSRPALSPL NPGPDGPRRRGRKPTK R S R P R R 1 2 1 3 1 0 0 3 0 1 2 0 0 1 7 2 0 0 0 0 0 0 24 1 2531.2227 Q9ULL5 Q9ULL5 309 332 PRR12 Proline-rich protein 12 yes yes 3 5.2366E-06 89.201 By MS/MS By MS/MS 1 1 17867000 10901000 6965800 5912 3045 6729 14842;14843 14381;14382;14383;14384 14382 6421;6422 4 SRPFTVAASFQSTSVK RSSSLKERSRPFTVAA SFQSTSVKSPKTVSPP R S R V K S 2 1 0 0 0 1 0 0 0 0 0 1 0 2 1 4 2 0 0 2 0 0 16 1 1711.8893 Q9UHB6;F8VS07;F8VQE1 Q9UHB6 588 603 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.031695 47.429 By MS/MS 1 0 0 0 5913 3003 6730 14844 14385 14385 1 SRPFTVAASFQSTSVKSPK RSSSLKERSRPFTVAA STSVKSPKTVSPPIRK R S R P K T 2 1 0 0 0 1 0 0 0 0 0 2 0 2 2 5 2 0 0 2 0 0 19 2 2024.0691 Q9UHB6;F8VS07;F8VQE1 Q9UHB6 588 606 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0016759 82.859 By matching By MS/MS 1 1 29016000 18190000 10826000 5914 3003 6731 14845;14846 14386 14386 6324 1 SRPTSEGSDIESTEPQK TSISKMKRSRPTSEGS IESTEPQKQCSKKKKK R S R Q K Q 0 1 0 1 0 1 3 1 0 1 0 1 0 0 2 4 2 0 0 0 0 0 17 1 1846.8545 Q4G0J3;H0YA82;D6RFF0 Q4G0J3 254 270 LARP7 La-related protein 7 yes no 2;3 0.0019406 96.096 By MS/MS By MS/MS 3 3 206170000 109580000 96586000 5915 2194 6732;6733 14847;14848;14849;14850;14851;14852 14387;14388;14389;14390 14387 4374;4375;7619 4 SRPTSFADELAAR EENTRPKRSRPTSFAD FADELAARIKGDAVGR R S R A R I 3 2 0 1 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 0 0 0 13 1 1419.7106 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6;A0A0A0MT65;A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1 F8W7U3 196 208 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 2 1E-10 151.11 By MS/MS By MS/MS 2 2 234350000 115050000 119290000 5916 814;183 6734;6735 14853;14854;14855;14856 14391;14392;14393;14394 14394 320;321 4 SRQKDQCENPIQVR LRESFQQKSRQKDQCE CENPIQVRVKKEETNF K S R V R V 0 2 1 1 1 3 1 0 0 1 0 1 0 0 1 1 0 0 0 1 0 0 14 2 1756.8639 P59923 P59923 359 372 ZNF445 Zinc finger protein 445 yes yes 3 0.03049 43.297 By MS/MS 1 0 0 0 5917 1925 6736 14857 14395 14395 1 SRSAPPNLWAAQR EPSPFRGRSRSAPPNL PNLWAAQRYGRELRRM R S R Q R Y 3 2 1 0 0 1 0 0 0 0 1 0 0 0 2 2 0 1 0 0 0 0 13 1 1452.7586 Q92934;F5H3B1;F5H1R6 Q92934 97 109 BAD Bcl2-associated agonist of cell death yes no 3 0.020795 54.811 By matching By MS/MS 1 1 11277000 6146900 5130000 5918 2612 6737 14858;14859 14396 14396 5367;5368 0 SRSDIDVNAAAGAK SLPGSLQRSRSDIDVN VNAAAGAKAHHAAGQS R S R A K A 4 1 1 2 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 1 1373.6899 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;B3KR06;E7ENG2 E3W994 368 381 CLASP2 CLIP-associating protein 2 yes no 2;3 0.00045228 91.518 By MS/MS By MS/MS 2 2 219730000 123650000 96079000 5919 774 6738 14860;14861;14862;14863 14397;14398;14399 14398 1387;1388 3 SRSDIDVNAAASAK STTGSLQRSRSDIDVN VNAAASAKSKVSSSSG R S R A K S 4 1 1 2 0 0 0 0 0 1 0 1 0 0 0 3 0 0 0 1 0 0 14 1 1403.7005 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 379 392 CLASP1 CLIP-associating protein 1 yes no 2;3 0.0003379 119.62 By MS/MS By MS/MS 2 2 86636000 52847000 33789000 5920 1043 6739 14864;14865;14866;14867 14400;14401;14402;14403 14403 1976;1977 3 SRSFDYNYR SYERRRSRSRSFDYNY RSFDYNYRRSYSPRNR R S R Y R R 0 2 1 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 2 0 0 0 9 1 1206.5418 Q5JRI1;O75494 Q5JRI1 131 139 SRSF10 Serine/arginine-rich splicing factor 10 yes no 3 0.0035137 75.89 By MS/MS By MS/MS 1 1 21670000 9623400 12047000 5921 1548 6740 14868;14869 14404;14405;14406 14405 2924;2925 3 SRSFTLDDESLK ESRSSSSRSRSFTLDD TLDDESLKYLTHEEKD R S R L K Y 0 1 0 2 0 0 1 0 0 0 2 1 0 1 0 3 1 0 0 0 0 0 12 1 1396.6834 Q86WR7;X6RHS9 Q86WR7 41 52 PROSER2 Proline and serine-rich protein 2 yes no 2 1.5163E-10 145.86 By MS/MS By MS/MS 1 1 56936000 27507000 29429000 5922 2412 6741 14870;14871 14407;14408 14408 4922 2 SRSGEGEVSGLMR PHVSGVKRSRSGEGEV GEVSGLMRKVPRVSLE R S R M R K 0 2 0 0 0 0 2 3 0 0 1 0 1 0 0 3 0 0 0 1 0 0 13 1 1363.6514 Q13263;M0R0K9 Q13263 471 483 TRIM28 Transcription intermediary factor 1-beta yes no 3 0.00045657 91.932 By MS/MS By MS/MS 2 2 140310000 73820000 66491000 5923 2054 6742;6743 14872;14873;14874;14875 14409;14410;14411;14412;14413 14413 819 4038;4039 5 SRSLGGAVGSVASGAR PAAPAAPRSRSLGGAV GSVASGARAAQSPFSI R S R A R A 3 2 0 0 0 0 0 4 0 0 1 0 0 0 0 4 0 0 0 2 0 0 16 1 1430.759 Q8NHG8 Q8NHG8 80 95 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 yes yes 3 0.00047976 90.464 By MS/MS By MS/MS 1 1 13773000 6751100 7022300 5924 2524 6744 14876;14877 14414;14415 14414 5152;5153 2 SRSLQSTGQVFLGIYLICVAYSLQHSK ELYRRKPRSRSLQSTG AYSLQHSKEDRLAYLN R S R S K E 1 1 0 0 1 3 0 2 1 2 4 1 0 1 0 5 1 0 2 2 0 0 27 1 3054.5961 Q96IK0 Q96IK0 137 163 TMEM101 Transmembrane protein 101 yes yes 3 0.019706 40.288 By matching By MS/MS 1 1 14858000 4386400 10471000 5925 2668 6745 14878;14879 14416 14416 5498;5499 1 SRSLSNSNPDISGTPTSPDDEVR PASLNLNRSRSLSNSN TSPDDEVRSIIGSKGL R S R V R S 0 2 2 3 0 0 1 1 0 1 1 0 0 0 3 6 2 0 0 1 0 0 23 1 2430.1259 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 894 916 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 5.9311E-05 117.41 By MS/MS By MS/MS 3 4 111990000 56700000 55288000 5926 2689 6746;6747;6748 14880;14881;14882;14883;14884;14885;14886 14417;14418;14419;14420;14421;14422;14423;14424 14422 5551;5552;5553;5554;5555;5559;7801;7802 8 SRSPCRASEAGGSGSSGR DYDPFIYRSRSPCRAS GGSGSSGRGPALCFEG R S R G R G 2 3 0 0 1 0 1 4 0 0 0 0 0 0 1 6 0 0 0 0 0 0 18 2 1764.7922 Q9ULT6 Q9ULT6 601 618 ZNRF3 E3 ubiquitin-protein ligase ZNRF3 yes yes 2 0.030726 48.616 By MS/MS 1 0 0 0 5927 3048 6749 14887 14425 14425 1 SRSPGRPPK RGSRSRSRSRSPGRPP RSPGRPPKSARRSASA R S R P K S 0 2 0 0 0 0 0 1 0 0 0 1 0 0 3 2 0 0 0 0 0 0 9 2 980.55156 C9JXK0;Q14739 C9JXK0 84 92 LBR Lamin-B receptor yes no 3 0.011456 77.387 By MS/MS By matching 1 1 18660000 11146000 7514400 5928 700 6750 14888;14889 14426 14426 1297 1 SRSPLAIR LLPRKRSRSRSPLAIR SRSPLAIRRRSRSRTP R S R I R R 1 2 0 0 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 1 898.53485 Q9UQ35 Q9UQ35 2044 2051 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.02088 50.207 By matching By MS/MS 1 1 9072900 4472600 4600300 5929 3074 6751 14890;14891 14427 14427 6576;6577 1 SRSPLDKDTYPPSASVVGASVGGHR AVYVSRRRSRSPLDKD GASVGGHRHPPGGGGG R S R H R H 2 2 0 2 0 0 0 3 1 0 1 1 0 0 3 5 1 0 1 3 0 0 25 2 2539.2779 A0A087WWP4;Q96T37 A0A087WWP4 213 237 RBM15 Putative RNA-binding protein 15 yes no 3;4 0.007845 55.707 By MS/MS By MS/MS 3 2 64074000 28873000 35202000 5930 94 6752 14892;14893;14894;14895;14896 14428;14429;14430 14429 173;174 1 SRSPLELEPEAK VLRPRNKRSRSPLELE LELEPEAKKLCAKGSD R S R A K K 1 1 0 0 0 0 3 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 12 1 1354.7092 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 24 35 DDB2 DNA damage-binding protein 2 yes no 2;3 0.00098429 110.35 By MS/MS By MS/MS 2 2 84892000 35627000 49265000 5931 41 6753 14897;14898;14899;14900 14431;14432;14433 14432 79 3 SRSPLGFYVHLK SKSPRRTRSRSPLGFY LGFYVHLKNLSLSIDE R S R L K N 0 1 0 0 0 0 0 1 1 0 2 1 0 1 1 2 0 0 1 1 0 0 12 1 1402.7721 B9ZVT1;Q8IXT5 B9ZVT1 278 289 RBM12B RNA-binding protein 12B yes no 3 0.00063005 88.311 By MS/MS By MS/MS 1 2 18386000 7876700 10509000 5932 614 6754;6755 14901;14902;14903 14434;14435;14436 14436 1117;1118 3 SRSPLLNDRR KPRDKSRRSRSPLLND SPLLNDRRSKQSKSPS R S R R R S 0 3 1 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 10 2 1212.6687 Q13523 Q13523 366 375 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 3 0.030268 54.09 By MS/MS By matching 2 1 119040000 88643000 30393000 5933 2061 6756 14904;14905;14906 14437 14437 1 SRSPSSPELNNK LPQTPRPRSRSPSSPE SSPELNNKCLTPQRER R S R N K C 0 1 2 0 0 0 1 0 0 0 1 1 0 0 2 4 0 0 0 0 0 0 12 1 1314.6528 Q9UQ35 Q9UQ35 1497 1508 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 4.9802E-09 141.34 By MS/MS By MS/MS 4 3 125010000 65060000 59948000 5934 3074 6757;6758;6759 14907;14908;14909;14910;14911;14912;14913 14438;14439;14440;14441;14442;14443;14444;14445 14438 149 6578;6579;6580;6581 8 SRSPTPPSSAGLGSNSAPPIPDSR PGRRRRSRSRSPTPPS APPIPDSRLGEENKGH R S R S R L 2 2 1 1 0 0 0 2 0 1 1 0 0 0 6 7 1 0 0 0 0 0 24 1 2334.1564 J3QK89;Q8IWX8 J3QK89 826 849 CHERP Calcium homeostasis endoplasmic reticulum protein yes no 3 0.0007697 67.675 By MS/MS By MS/MS 2 2 126650000 55140000 71512000 5935 1346 6760;6761 14914;14915;14916;14917 14446;14447;14448;14449 14448 2487;2488;2489;2490;7253 4 SRSPYSPVLR YSSSSWRRSRSPYSPV SPYSPVLRRSGKSRSR R S R L R R 0 2 0 0 0 0 0 0 0 0 1 0 0 0 2 3 0 0 1 1 0 0 10 1 1160.6302 Q14004 Q14004 395 404 CDK13 Cyclin-dependent kinase 13 yes yes 2 0.0081582 63.76 By MS/MS By matching 1 1 31473000 14300000 17173000 5936 2080 6762 14918;14919 14450 14450 4105;4106;8334 1 SRSRSPLAIR TPLLPRKRSRSRSPLA SRSPLAIRRRSRSRTP R S R I R R 1 3 0 0 0 0 0 0 0 1 1 0 0 0 1 3 0 0 0 0 0 0 10 2 1141.668 Q9UQ35 Q9UQ35 2042 2051 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.014289 93.348 By MS/MS By matching 1 1 110830000 54996000 55832000 5937 3074 6763 14920;14921 14451 14451 6576;6577;6582 1 SRSRSPPPVSK SRSRSRSRSRSRSPPP RSPPPVSKRESKSRSR R S R S K R 0 2 0 0 0 0 0 0 0 0 0 1 0 0 3 4 0 0 0 1 0 0 11 2 1196.6626 Q01130 Q01130 187 197 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 2 0.012481 67.846 By MS/MS By matching 1 1 12102000 6898800 5203600 5938 1978 6764 14922;14923 14452 14452 3792;3793;3794 0 SRSRSPTPPSSAGLGSNSAPPIPDSR YSPGRRRRSRSRSPTP APPIPDSRLGEENKGH R S R S R L 2 3 1 1 0 0 0 2 0 1 1 0 0 0 6 8 1 0 0 0 0 0 26 2 2577.2895 J3QK89;Q8IWX8 J3QK89 824 849 CHERP Calcium homeostasis endoplasmic reticulum protein yes no 3 0.0090155 48.331 By matching By MS/MS 1 2 57423000 14649000 42774000 5939 1346 6765 14924;14925;14926 14453;14454 14454 2487;2488;2489;2490;2491;7253 2 SRSSDIVSSVR SYPERLVRSRSSDIVS SDIVSSVRRPMSDPSW R S R V R R 0 2 0 1 0 0 0 0 0 1 0 0 0 0 0 5 0 0 0 2 0 0 11 1 1191.6208 H0Y7I9;C9IZ08;Q14C86;H0Y4E7;F8W9S7 H0Y7I9 737 747 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2 0.0053617 86.738 By MS/MS By MS/MS 1 1 252460000 144290000 108170000 5940 617 6766 14927;14928 14455;14456 14456 1136 2 SRSSSPVTELASRSPIR QTSPKGGRSRSSSPVT LASRSPIRQDRGEFSA R S R I R Q 1 3 0 0 0 0 1 0 0 1 1 0 0 0 2 6 1 0 0 1 0 0 17 2 1828.9755 Q9UQ35 Q9UQ35 1099 1115 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.022183 48.354 By matching By MS/MS 1 1 38564000 17795000 20769000 5941 3074 6767 14929;14930 14457 14457 6583;6584;6585;6586;6587;6588 1 SRSVSPCSNVESR TSRTTPRRSRSVSPCS PCSNVESRLLPRYSHS R S R S R L 0 2 1 0 1 0 1 0 0 0 0 0 0 0 1 5 0 0 0 2 0 0 13 1 1463.6787 Q9UQ35;I3L4D8;I3L182 Q9UQ35 950 962 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 0.011933 89.466 By MS/MS By MS/MS 3 3 65322000 33445000 31877000 5942 3074 6768;6769 14931;14932;14933;14934;14935;14936 14458;14459;14460 14458 6558;6559;6560 2 SRSYTPEYR HSHRRRSRSRSYTPEY RSYTPEYRRRRSRSHS R S R Y R R 0 2 0 0 0 0 1 0 0 0 0 0 0 0 1 2 1 0 2 0 0 0 9 1 1157.5465 Q13595 Q13595 84 92 TRA2A Transformer-2 protein homolog alpha yes yes 2 0.0089392 63.76 By matching By MS/MS 1 1 100350000 52209000 48136000 5943 2069 6770 14937;14938 14461 14461 4084;4085;8332 1 SRTHSTSSSLGSGESPFSR ASMTRLARSRTHSTSS SGESPFSRSVTSNQSD R S R S R S 0 2 0 0 0 0 1 2 1 0 1 0 0 1 1 8 2 0 0 0 0 0 19 1 1965.914 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 232 250 NDRG3 Protein NDRG3 yes no 3 0.000266 93.812 By MS/MS By MS/MS 1 1 10662000 5772700 4889400 5944 1049 6771 14939;14940 14462;14463;14464 14462 1985;1986;7166;7167 3 SRTPMTFTTHIEDVHSEPLFRK TSDLHRNRSRTPMTFT HSEPLFRKDFQQINPP R S R R K D 0 2 0 1 0 0 2 0 2 1 1 1 1 2 2 2 4 0 0 1 0 0 22 2 2628.3119 H0YK69;Q7Z5M5 H0YK69 838 859 TMC3 Transmembrane channel-like protein;Transmembrane channel-like protein 3 yes no 3 0.02514 42.309 By matching By MS/MS 1 1 12869000 6104900 6764400 5945 1198 6772 14941;14942 14465 14465 2241 1 SRTPPSAPSQSR PPLLDRARSRTPPSAP PSAPSQSRMTSERAPS R S R S R M 1 2 0 0 0 1 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 12 1 1269.6426 Q9UQ35;I3L3Q8 Q9UQ35 2407 2418 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0016813 84.046 By MS/MS By MS/MS 1 1 38605000 25357000 13248000 5946 3074 6773 14943;14944 14466;14467 14466 7933 2 SRTPSASNDDQQE EQLRSQIRSRTPSASN ASNDDQQE________ R S R Q E - 1 1 1 2 0 2 1 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 13 1 1433.6019 O43765 O43765 301 313 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 2 1.9168E-19 168.45 By MS/MS By MS/MS 4 3 57464000 24552000 32912000 5947 1508 6774 14945;14946;14947;14948;14949;14950;14951 14468;14469;14470;14471;14472;14473;14474;14475 14474 2835;2836;7320 8 SRTSPVSR LISRRRSRSRTSPVSR SRTSPVSRRRSRSRTS R S R S R R 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 0 0 1 0 0 8 1 888.47773 Q9UQ35 Q9UQ35 1890 1897 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.019203 88.596 By MS/MS 1 48764000 0 48764000 5948 3074 6775 14952 14476 14476 6589 1 SRTSPVTR PITRRRSRSRTSPVTR SRTSPVTRRRSRSRTS R S R T R R 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 0 1 0 0 8 1 902.49338 Q9UQ35 Q9UQ35 1984 1991 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0064402 119.27 By matching By MS/MS 1 1 409640000 107710000 301930000 5949 3074 6776 14953;14954 14477 14477 6590 1 SRTSVQTEDDQLIAGQSAR EQEDYDVRSRTSVQTE LIAGQSARAIMAQLPQ R S R A R A 2 2 0 2 0 3 1 1 0 1 1 0 0 0 0 3 2 0 0 1 0 0 19 1 2061.0087 A0A0A0MTJ6;A0A0A0MRI5;P26232;G3XAM7;P35221 A0A0A0MTJ6 267 285 CTNNA2;CTNNA1 Catenin alpha-2;Catenin alpha-1 no no 2;3 7.7212E-26 162.98 By MS/MS By MS/MS 5 5 410680000 194490000 216190000 5950 217;1093 6777;6778;6779 14955;14956;14957;14958;14959;14960;14961;14962;14963;14964 14478;14479;14480;14481;14482;14483;14484;14485;14486 14479 378;379;6891;6892 8 SRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSALR DLAAGVGRSRVPVRPP QNTNSALRYKGKGTGK R S R L R Y 1 3 2 8 0 3 4 0 0 0 1 0 0 0 3 3 1 0 2 3 0 0 34 2 3995.7165 F8W6N3;Q92560 F8W6N3 366 399 BAP1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase BAP1 yes no 4 0.00050864 59.048 By MS/MS By MS/MS 1 1 27764000 12133000 15630000 5951 1034 6780 14965;14966 14487;14488 14488 1941 2 SRVTMSVDTSK TYYNPSLKSRVTMSVD TMSVDTSKNQFSLKLS K S R S K N 0 1 0 1 0 0 0 0 0 0 0 1 1 0 0 3 2 0 0 2 0 0 11 1 1209.6023 A0A0C4DH34 A0A0C4DH34 85 95 IGHV4-28 yes yes 2 0.028095 44.829 By MS/MS 1 0 0 0 5952 331 6781 14967 14489 14489 131 585 1 SRWLGTQPSPYAVYR ITKCCGLRSRWLGTQP PSPYAVYRFFTFSDHD R S R Y R F 1 2 0 0 0 1 0 1 0 0 1 0 0 0 2 2 1 1 2 1 0 0 15 1 1779.9057 G3V3F7;Q96KN7;G3V3I7 G3V3F7 775 789 RPGRIP1 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 no no 1 NaN 0 0 0 5953 1075 0 SSADKIGEVSSPK KESQQHSKSSADKIGE IGEVSSPKASSKLAIM K S S P K A 1 0 0 1 0 0 1 1 0 1 0 2 0 0 1 4 0 0 0 1 0 0 13 1 1303.662 P35251 P35251 302 314 RFC1 Replication factor C subunit 1 yes yes 2 0.0063141 84.62 By matching By MS/MS 1 1 43442000 22663000 20780000 5954 1793 6782 14968;14969 14490 14490 3387 1 SSAGDTEFVHQNSQEIQR LDSVPLVKSSAGDTEF QNSQEIQRSSQDEMVS K S S Q R S 1 1 1 1 0 3 2 1 1 1 0 0 0 1 0 3 1 0 0 1 0 0 18 0 2031.9246 O43164 O43164 241 258 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 3 0.026876 59.469 By MS/MS 1 0 0 0 5955 1488 6783 14970 14491 14491 2782 1 SSAPADSERGPKPEPPGSGSPAPPR KRKRKKNKSSAPADSE SGSPAPPRRRRRAQDD K S S P R R 3 2 0 1 0 0 2 3 0 0 0 1 0 0 8 5 0 0 0 0 0 0 25 2 2427.1779 Q9UKJ3 Q9UKJ3 721 745 GPATCH8 G patch domain-containing protein 8 yes yes 3 0.028274 50.323 By MS/MS By matching 1 1 13957000 7699300 6257900 5956 3025 6784 14971;14972 14492 14492 6379 1 SSASAPDVDDPEAFPALA NRGSRTDKSSASAPDV PEAFPALA________ K S S L A - 5 0 0 3 0 0 1 0 0 0 1 0 0 1 3 3 0 0 0 1 0 0 18 0 1758.7948 Q8NC51 Q8NC51 391 408 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.00065064 101.93 By MS/MS By matching 1 1 15866000 9249200 6616800 5957 2498 6785 14973;14974 14493 14493 1 SSATLWNSPSR IINKRLSKSSATLWNS TLWNSPSRNRSLQLSA K S S S R N 1 1 1 0 0 0 0 0 0 0 1 0 0 0 1 4 1 1 0 0 0 0 11 0 1204.5836 Q3KQU3;C9JIR3 Q3KQU3 273 283 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.0009259 107.46 By matching By MS/MS 1 1 7157400 3215500 3941900 5958 2187 6786 14975;14976 14494 14494 4358 1 SSATRLLYCTTGVLLR QIRLESVKSSATRLLY CTTGVLLRRLEGDTAL K S S L R R 1 2 0 0 1 0 0 1 0 0 4 0 0 0 0 2 3 0 1 1 0 0 16 1 1809.9771 Q6P158 Q6P158 636 651 DHX57 Putative ATP-dependent RNA helicase DHX57 yes yes 2 0.029269 42.041 By matching By MS/MS 1 1 30643000 14329000 16314000 5959 2314 6787 14977;14978 14495 14495 0 SSATSGDIWPGLSAYDNSPR ESIDEFNKSSATSGDI SAYDNSPRSPHSPSPI K S S P R S 2 1 1 2 0 0 0 2 0 1 1 0 0 0 2 5 1 1 1 0 0 0 20 0 2079.9498 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 205 224 BCLAF1 Bcl-2-associated transcription factor 1 no no 2;3 3.2133E-176 248.33 By MS/MS By MS/MS 3 2 461300000 280100000 181200000 5960 2947;888 6788;6789 14979;14980;14981;14982;14983 14496;14497;14498;14499;14500;14501;14502;14503;14504;14505;14506;14507 14498 1663;1664;1665 12 SSDEENGPPSSPDLDR KEKRTEARSSDEENGP PSSPDLDRIAASMRAL R S S D R I 0 1 1 3 0 0 2 1 0 0 1 0 0 0 3 4 0 0 0 0 0 0 16 0 1700.7126 Q96B36 Q96B36 202 217 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 4.9824E-32 169.72 By MS/MS By MS/MS 3 2 64336000 32175000 32161000 5961 2624 6790;6791;6792 14984;14985;14986;14987;14988 14508;14509;14510;14511;14512 14510 124 5399;5400 5 SSDGSLSHEEDLAK TPSTSGKRSSDGSLSH SHEEDLAKVIELQEII R S S A K V 1 0 0 2 0 0 2 1 1 0 2 1 0 0 0 4 0 0 0 0 0 0 14 0 1473.6583 Q13136;H0YEF9;E9PJZ7 Q13136 238 251 PPFIA1 Liprin-alpha-1 yes no 2 0.016452 61.657 By matching By MS/MS 1 1 28913000 13675000 15239000 5962 2045 6793 14989;14990 14513 14513 4012;4013 1 SSDIVSSVR PERLVRSRSSDIVSSV SDIVSSVRRPMSDPSW R S S V R R 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 2 0 0 9 0 948.48762 H0Y7I9;C9IZ08;Q14C86;H0Y4E7;F8W9S7 H0Y7I9 739 747 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2 0.008896 79.659 By MS/MS By MS/MS 1 1 71255000 39528000 31727000 5963 617 6794 14991;14992 14514;14515 14515 1136 2 SSDKFCSPISSELAQNHEFYK GGGPARRRSSDKFCSP AQNHEFYKNADVRPPF R S S Y K N 1 0 1 1 1 1 2 0 1 1 1 2 0 2 1 5 0 0 1 0 0 0 21 1 2473.122 B7ZBM3;Q8IVH2 B7ZBM3 430 450 FOXP4 Forkhead box protein P4 yes no 3 0.0030746 61.039 By matching By MS/MS 1 1 17082000 6424400 10657000 5964 596 6795 14993;14994 14516 14516 1087 1 SSDPGPDIGVVEESPEKGDEISLR LHRQIKGRSSDPGPDI KGDEISLRRSPRIKQL R S S L R R 0 1 0 3 0 0 4 3 0 2 1 1 0 0 3 4 0 0 0 2 0 0 24 1 2511.1977 Q7Z2Z1 Q7Z2Z1 988 1011 TICRR Treslin yes yes 3 3.451E-06 101.45 By MS/MS By MS/MS 1 1 49062000 25482000 23580000 5965 2373 6796 14995;14996 14517;14518 14518 4814 2 SSDQPLTVPVSPK KYQGLEIKSSDQPLTV LTVPVSPKFSTRFHC_ K S S P K F 0 0 0 1 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 0 1353.714 Q9ULW0 Q9ULW0 728 740 TPX2 Targeting protein for Xklp2 yes yes 2 1.2053E-05 125.5 By MS/MS By MS/MS 1 1 379570000 188030000 191540000 5966 3049 6797 14997;14998 14519;14520;14521;14522 14519 6434 4 SSDTSGNEASEIESVK PPGKEAKRSSDTSGNE ASEIESVKISAKKPGR R S S V K I 1 0 1 1 0 0 3 1 0 1 0 1 0 0 0 5 1 0 0 1 0 0 16 0 1638.7221 D6R9S4;Q09GN1;Q71F23 D6R9S4 78 93 CENPU;MLF1IP Centromere protein U yes no 2 0.0019619 86.772 By matching By MS/MS 1 1 7015000 3351300 3663700 5967 731 6798 14999;15000 14523;14524 14524 1330 2 SSDYQFPSSPFTDTLK PRVINRQRSSDYQFPS SPFTDTLKGTTEDDVL R S S L K G 0 0 0 2 0 1 0 0 0 0 1 1 0 2 2 4 2 0 1 0 0 0 16 0 1818.8312 Q9UK61 Q9UK61 971 986 FAM208A Protein FAM208A yes yes 2 0.00021162 112.96 By MS/MS By MS/MS 2 1 16061000 13014000 3046300 5968 3019 6799;6800 15001;15002;15003 14525;14526;14527 14525 6358;6359;7904;7905 2 SSEDLAGPLPSSVSSSSTTSSKPK LAVLGPSRSSEDLAGP STTSSKPKLKKRFSLR R S S P K L 1 0 0 1 0 0 1 1 0 0 2 2 0 0 3 10 2 0 0 1 0 0 24 1 2335.1391 Q9NRF2 Q9NRF2 125 148 SH2B1 SH2B adapter protein 1 yes yes 3 0.009551 50.144 By MS/MS By matching 1 1 12428000 5463500 6964100 5969 2907 6801 15004;15005 14528 14528 6132;6133 1 SSELLGQAAR KQVLKGSRSSELLGQA ELLGQAARNMVLQEDA R S S A R N 2 1 0 0 0 1 1 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 10 0 1030.5407 A0A0B4J1R7;Q96B45 A0A0B4J1R7 45 54 C10orf32-ASMT;C10orf32 UPF0693 protein C10orf32 yes no 2 0.015396 68.786 By MS/MS 1 6027200 0 6027200 5970 286 6802 15006 14529 14529 507 1 SSELLVR KIRDVLRRSSELLVRK RSSELLVRKLQGTEPR R S S V R K 0 1 0 0 0 0 1 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 7 0 802.45487 Q9NSK0 Q9NSK0 565 571 KLC4 Kinesin light chain 4 yes yes 2 0.031291 71.692 By matching By MS/MS 1 1 8331500 5257400 3074000 5971 2916 6803 15007;15008 14530 14530 1 SSEMLVKKLQGGTPQEPPNPR KLRDALRRSSEMLVKK PQEPPNPRMKRASSLN R S S P R M 0 1 1 0 0 2 2 2 0 0 2 2 1 0 4 2 1 0 0 1 0 0 21 2 2292.1896 Q9H0B6;A8MZ87 Q9H0B6 556 576 KLC2 Kinesin light chain 2 yes no 3 0.021806 54.253 By MS/MS 1 8786200 0 8786200 5972 2800 6804 15009 14531 14531 5846;5847 0 SSEPVKETVQTTQSPTPVEK NTEWETVKSSEPVKET QSPTPVEKETVVTTQA K S S E K E 0 0 0 0 0 2 3 0 0 0 0 2 0 0 3 3 4 0 0 3 0 0 20 1 2171.0958 A0A0A0MT33;Q9UPN6 A0A0A0MT33 682 701 SCAF8 Protein SCAF8 yes no 2 0.010036 68.134 By MS/MS By matching 1 1 50397000 28907000 21489000 5973 263 6805 15010;15011 14532 14532 456;6912;6913 1 SSESSCGVDGDYEDAELNPR SRPPYRGRSSESSCGV EDAELNPRFLKDNLID R S S P R F 1 1 1 3 1 0 3 2 0 0 1 0 0 0 1 4 0 0 1 1 0 0 20 0 2185.8706 A9UF01;P11274 A9UF01 235 254 BCR/ABL fusion;BCR Breakpoint cluster region protein yes no 2;3 0.00048337 95.067 By MS/MS By matching 2 1 23648000 15550000 8097900 5974 510 6806 15012;15013;15014 14533;14534;14535 14534 933;934;8060 3 SSEVLYERPQPTPAFSSR ASGPPVCKSSEVLYER PTPAFSSRTAGPPDPP K S S S R T 1 2 0 0 0 1 2 0 0 0 1 0 0 1 3 4 1 0 1 1 0 0 18 1 2050.012 Q96HB5 Q96HB5 393 410 CCDC120 Coiled-coil domain-containing protein 120 yes yes 3 0.00045519 89.541 By matching By MS/MS 1 1 11395000 6492300 4902400 5975 2661 6807 15015;15016 14536 14536 5488 1 SSFFSDRGSGSR SRSDSRGKSSFFSDRG SDRGSGSRGRFDDRGR K S S S R G 0 2 0 1 0 0 0 2 0 0 0 0 0 2 0 5 0 0 0 0 0 0 12 1 1288.5796 A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O00571;A0A087WX09;B4DLA0;A0A0J9YYH6 A0A0D9SFB3 82 93 DDX3X ATP-dependent RNA helicase DDX3X yes no 3 0.018117 54.871 By MS/MS By matching 1 1 15174000 9149800 6024400 5976 340 6808 15017;15018 14537 14537 600 1 SSFLSSPER CREELMVKSSFLSSPE SFLSSPERAVNPHLPR K S S E R A 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 4 0 0 0 0 0 0 9 0 1008.4876 Q4AC94 Q4AC94 2127 2135 C2CD3 C2 domain-containing protein 3 yes yes 2 0.014195 87.641 By MS/MS By matching 1 1 8735600 4060900 4674700 5977 2191 6809 15019;15020 14538 14538 4366 0 SSFSHYSGLK DRHSGSDRSSFSHYSG FSHYSGLKHEDKRGGS R S S L K H 0 0 0 0 0 0 0 1 1 0 1 1 0 1 0 4 0 0 1 0 0 0 10 0 1111.5298 Q8NC51 Q8NC51 202 211 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 0.013294 78.264 By MS/MS By matching 1 1 19953000 11748000 8205000 5978 2498 6810 15021;15022 14539 14539 8400 1 SSFYSGGWQEGSSSPR ANSNGVERSSFYSGGW QEGSSSPRSHLSPEQG R S S P R S 0 1 0 0 0 1 1 3 0 0 0 0 0 1 1 6 0 1 1 0 0 0 16 0 1717.7332 D3DPQ1;Q96BR9 D3DPQ1 148 163 ZBTB8A Zinc finger and BTB domain-containing protein 8A yes no 2 7.7386E-07 129.54 By MS/MS By matching 1 1 15292000 7241600 8050000 5979 720 6811 15023;15024 14540 14540 1326 1 SSFYVNGLTLGGQK GVLVGKDRSSFYVNGL GLTLGGQKCSVIRDSL R S S Q K C 0 0 1 0 0 1 0 3 0 0 2 1 0 1 0 2 1 0 1 1 0 0 14 0 1469.7514 P07737;K7EJ44;I3L3D5 P07737 57 70 PFN1 Profilin-1 yes no 2 0.0030741 105.2 By MS/MS By MS/MS 2 2 17203000 7872400 9330300 5980 1654 6812;6813 15025;15026;15027;15028 14541;14542;14543 14542 3 SSGDPEQIKEDSLSEESADAR ESEGCYCRSSGDPEQI SEESADARSFEMTEFN R S S A R S 2 1 0 3 0 1 4 1 0 1 1 1 0 0 1 5 0 0 0 0 0 0 21 1 2248.9931 Q9BVS4 Q9BVS4 369 389 RIOK2 Serine/threonine-protein kinase RIO2 yes yes 3 0.00079567 72.654 By MS/MS By matching 1 1 18008000 9504900 8503500 5981 2758 6814 15029;15030 14544 14544 5741 1 SSGFISELPSEEGK PSLRQEKRSSGFISEL ELPSEEGKKLEHFTKL R S S G K K 0 0 0 0 0 0 3 2 0 1 1 1 0 1 1 4 0 0 0 0 0 0 14 0 1465.6937 Q5VZK9;A0A0U1RQQ1 Q5VZK9 967 980 LRRC16A Leucine-rich repeat-containing protein 16A yes no 2 0.010147 72.898 By MS/MS By MS/MS 1 1 17409000 7803000 9606300 5982 2282 6815 15031;15032 14545;14546 14545 4586;4587 2 SSGGSGGGPLSHFYSGSPTSYFTSGLQAGLK PPSGFGERSSGGSGGG SGLQAGLKQSHLSKAI R S S L K Q 1 0 0 0 0 1 0 8 1 0 3 1 0 2 2 8 2 0 2 0 0 0 31 0 2990.4046 A0A087WZ13;E9PAU2;K7EQG2 A0A087WZ13 627 657 RAVER1 yes no 3 3.4067E-05 69.857 By matching By MS/MS 1 1 18334000 8477600 9856700 5983 134 6816 15033;15034 14547 14547 223;7992 1 SSGHSSSELSPDAVEK DMKEQSTRSSGHSSSE LSPDAVEKAGMSSNQS R S S E K A 1 0 0 1 0 0 2 1 1 0 1 1 0 0 1 6 0 0 0 1 0 0 16 0 1615.7326 Q9UQ35 Q9UQ35 1378 1393 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 1.2726E-15 148.36 By MS/MS By MS/MS 4 3 133380000 75018000 58365000 5984 3074 6817;6818;6819 15035;15036;15037;15038;15039;15040;15041 14548;14549;14550;14551;14552;14553 14550 6591;6592;6593 5 SSGPYGGGGQYFAKPR KGGNFGGRSSGPYGGG GQYFAKPRNQGGYGGS R S S P R N 1 1 0 0 0 1 0 5 0 0 0 1 0 1 2 2 0 0 2 0 0 0 16 1 1627.7743 F8W6I7;P09651;H0YH80 F8W6I7 272 287 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 2;3 0.015185 70.134 By MS/MS By matching 2 2 24624000 13522000 11103000 5985 1033 6820 15042;15043;15044;15045 14554;14555 14554 1932;1933 2 SSGSETEQVVDFSDR KYPLRQTRSSGSETEQ QVVDFSDRETKNTADH R S S D R E 0 1 0 2 0 1 2 1 0 0 0 0 0 1 0 4 1 0 0 2 0 0 15 0 1641.7118 O95251 O95251 99 113 KAT7 Histone acetyltransferase KAT7 yes yes 2 2.5893E-21 153.41 By matching By MS/MS 1 2 14458000 7812100 6645400 5986 1587 6821 15046;15047;15048 14556;14557 14557 3007;3008 2 SSGSPYGGGYGSGGGSGGYGSR KGGSFGGRSSGSPYGG GSGGYGSRRF______ R S S S R R 0 1 0 0 0 0 0 11 0 0 0 0 0 0 1 6 0 0 3 0 0 0 22 0 1909.7827 P51991;H7C1J8 P51991 355 376 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 2 2.0549E-25 158.02 By MS/MS By MS/MS 1 1 633550000 354310000 279240000 5987 1883 6822 15049;15050 14558;14559 14558 3647;3648 2 SSGTSLLCSQGLGGVSWPGEQQR CSAPRKGKSSGTSLLC SWPGEQQRPLIGRSPS K S S Q R P 0 1 0 0 1 3 1 5 0 0 3 0 0 0 1 5 1 1 0 1 0 0 23 0 2390.1285 H7BZH2 H7BZH2 12 34 EIF4E2 yes yes 2 0.026771 50.102 By MS/MS 1 0 0 0 5988 1266 6823 15051 14560 14560 2350;2351 1 SSHFIKALFNEYNIMAEEGIMPPTQK S S Q K 2 0 2 0 0 1 3 1 1 3 1 2 2 2 2 2 1 0 1 0 0 0 26 1 2994.462 REV__G3V561 yes yes 3 0.010847 45.187 By MS/MS 1 58715000 58715000 0 + 5989 3185 6824 15052 14561 14561 1260 6780;6781;7962 1 SSIDNENLVSER LNRQLAQRSSIDNENL NENLVSERERVLLEEL R S S E R E 0 1 2 1 0 0 2 0 0 1 1 0 0 0 0 3 0 0 0 1 0 0 12 0 1361.6423 A0A0A0MRF6;Q99996 A0A0A0MRF6 1652 1663 AKAP9 A-kinase anchor protein 9 yes no 2 0.004674 81.128 By matching By MS/MS 1 1 7779700 3993900 3785800 5990 210 6825 15053;15054 14562 14562 375 1 SSIEDAQCPGLPDLIEENHVVNK FLSIPESRSSIEDAQC EENHVVNKTDLKVDCL R S S N K T 1 0 2 2 1 1 3 1 1 2 2 1 0 0 2 2 0 0 0 2 0 0 23 0 2563.2224 Q15398 Q15398 689 711 DLGAP5 Disks large-associated protein 5 yes yes 3 1.1526E-26 160.83 By MS/MS By MS/MS 1 1 55678000 26783000 28895000 5991 2137 6826 15055;15056 14563;14564;14565 14565 4237;4238 3 SSIHNFMTHPEFR GLEKPESRSSIHNFMT FMTHPEFRIEDSEPHI R S S F R I 0 1 1 0 0 0 1 0 2 1 0 0 1 2 1 2 1 0 0 0 0 0 13 0 1601.7409 H0YHH6;A0A0U1RQU3;E7ERY9;P20020 H0YHH6 120 132 ATP2B1 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 1 yes no 3 0.0023039 74.783 By MS/MS By MS/MS 2 2 120370000 52556000 67817000 5992 390 6827;6828 15057;15058;15059;15060 14566;14567;14568;14569 14569 152 717;718 4 SSILLDVKPWDDETDMAK KKPALVAKSSILLDVK DDETDMAKLEECVRSI K S S A K L 1 0 0 4 0 0 1 0 0 1 2 2 1 0 1 2 1 1 0 1 0 0 18 1 2061.9929 P24534 P24534 140 157 EEF1B2 Elongation factor 1-beta yes yes 2;3 1.6346E-64 191.61 By MS/MS By MS/MS 4 4 276540000 137140000 139400000 5993 1758 6829;6830 15061;15062;15063;15064;15065;15066;15067;15068 14570;14571;14572;14573;14574;14575;14576;14577 14573 662 3315;3316 8 SSIQFYNKVISSR FTSDFKAKSSIQFYNK YNKVISSRGFPFENSS K S S S R G 0 1 1 0 0 1 0 0 0 2 0 1 0 1 0 4 0 0 1 1 0 0 13 1 1527.8045 Q86Z14 Q86Z14 953 965 KLB Beta-klotho yes yes 2 0.02317 44.598 By matching By MS/MS 1 1 11806000 5600200 6205300 5994 2423 6831 15069;15070 14578 14578 4953;4954;4955 1 SSITEPEGPGGPNIQK APRPLKKRSSITEPEG PGGPNIQKLLYQRFNT R S S Q K L 0 0 1 0 0 1 2 3 0 2 0 1 0 0 3 2 1 0 0 0 0 0 16 0 1609.7948 H0YJL1;Q96KQ4 H0YJL1 365 380 PPP1R13B Apoptosis-stimulating of p53 protein 1 yes no 2 0.00033479 98.253 By MS/MS 1 11424000 0 11424000 5995 1196 6832 15071 14579 14579 2238;2239;7220 1 SSITEPEGPNGPNIQK APRPLKKRSSITEPEG PNGPNIQKLLYQRTTI R S S Q K L 0 0 2 0 0 1 2 2 0 2 0 1 0 0 3 2 1 0 0 0 0 0 16 0 1666.8162 Q13625 Q13625 736 751 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2 2.047E-10 140.03 By MS/MS By MS/MS 1 1 34802000 14286000 20515000 5996 2073 6833 15072;15073 14580;14581 14581 4090;4091 2 SSKRGASPSR STSSKSSRSSKRGASP KRGASPSRHSISEWRM R S S S R H 1 2 0 0 0 0 0 1 0 0 0 1 0 0 1 4 0 0 0 0 0 0 10 2 1031.5472 Q9BZ72 Q9BZ72 313 322 PITPNM2 Membrane-associated phosphatidylinositol transfer protein 2 yes yes 2 0.020985 92.295 By MS/MS By matching 1 1 131520000 46205000 85313000 5997 2782 6834 15074;15075 14582 14582 5785;5786 1 SSLAETLDSTGSLDPQR TENGIAEKSSLAETLD TGSLDPQRSDMIYTIE K S S Q R S 1 1 0 2 0 1 1 1 0 0 3 0 0 0 1 4 2 0 0 0 0 0 17 0 1775.8537 Q9UGH3 Q9UGH3 70 86 SLC23A2 Solute carrier family 23 member 2 yes yes 2 1.2511E-15 145.17 By MS/MS By MS/MS 2 2 62193000 28546000 33648000 5998 3000 6835;6836 15076;15077;15078;15079 14583;14584;14585 14584 6308;6309;7898 2 SSLCGEEQGSPEELR PLPLTWKRSSLCGEEQ QGSPEELRQREAAEPL R S S L R Q 0 1 0 0 1 1 4 2 0 0 2 0 0 0 1 3 0 0 0 0 0 0 15 0 1676.7312 Q2M1P5 Q2M1P5 1280 1294 KIF7 Kinesin-like protein KIF7 yes yes 2 0.0032442 81.992 By MS/MS By MS/MS 2 2 36734000 19004000 17730000 5999 2178 6837 15080;15081;15082;15083 14586;14587 14586 4331;4332;4333 2 SSLEGPTILDIEK SGSKKTLRSSLEGPTI PTILDIEKFHRESFFY R S S E K F 0 0 0 1 0 0 2 1 0 2 2 1 0 0 1 2 1 0 0 0 0 0 13 0 1400.7399 A0A0G2JR96;A0A0G2JQT1;Q7L576 A0A0G2JR96 582 594 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes no 2 0.0020981 87.719 By MS/MS By MS/MS 1 1 6597200 3556000 3041200 6000 366 6838 15084;15085 14588;14589 14589 673;674 2 SSLFSPR SSGKSKKRSSLFSPRR RSSLFSPRRNKKEKKS R S S P R R 0 1 0 0 0 0 0 0 0 0 1 0 0 1 1 3 0 0 0 0 0 0 7 0 792.413 Q7RTP6 Q7RTP6 1700 1706 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 2 0.020707 105.98 By MS/MS By MS/MS 1 1 3584200 3584200 0 6001 2370 6839 15086;15087 14590;14591 14590 4804 2 SSLGQSASETEEDTVSVSK EEMETDARSSLGQSAS EDTVSVSKKEKNRKRR R S S S K K 1 0 0 1 0 1 3 1 0 0 1 1 0 0 0 6 2 0 0 2 0 0 19 0 1939.8858 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 285 303 SF3B2 Splicing factor 3B subunit 2 yes no 2 0.0011421 79.885 By MS/MS By MS/MS 2 2 34535000 15993000 18542000 6002 922 6840 15088;15089;15090;15091 14592;14593;14594 14594 1716;1717;1718;1719 3 SSLGQSASETEEDTVSVSKK EEMETDARSSLGQSAS DTVSVSKKEKNRKRRN R S S K K E 1 0 0 1 0 1 3 1 0 0 1 2 0 0 0 6 2 0 0 2 0 0 20 1 2067.9808 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 285 304 SF3B2 Splicing factor 3B subunit 2 yes no 2;3 6.7515E-05 101.23 By MS/MS By MS/MS 3 5 58114000 12142000 45971000 6003 922 6841;6842 15092;15093;15094;15095;15096;15097;15098;15099 14595;14596;14597;14598;14599;14600 14600 1716;1717;1718;1719 3 SSLGSLQTPEAVTTR SPTLPAARSSLGSLQT TPEAVTTRKGTGLLSS R S S T R K 1 1 0 0 0 1 1 1 0 0 2 0 0 0 1 3 3 0 0 1 0 0 15 0 1545.7999 C9J6P4;Q7Z2W4 C9J6P4 386 400 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.00074175 104.09 By MS/MS By MS/MS 1 1 46269000 23915000 22354000 6004 642 6843 15100;15101 14601;14602 14601 1199;1200 2 SSLSGDEEDELFK RPSHHSQRSSLSGDEE DEEDELFKGATLKALR R S S F K G 0 0 0 2 0 0 3 1 0 0 2 1 0 1 0 3 0 0 0 0 0 0 13 0 1454.6413 A0A0A0MT60;Q5T1M5 A0A0A0MT60 1186 1198 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 1.0124E-11 150.9 By MS/MS By MS/MS 2 2 98783000 55375000 43408000 6005 266 6844 15102;15103;15104;15105 14603;14604;14605;14606 14606 470;471;472 4 SSLSTVSR NGNKEGARSSLSTVSR SSLSTVSRTLEKLKPG R S S S R T 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 4 1 0 0 1 0 0 8 0 835.43995 A6PVL3 A6PVL3 102 109 KNCN Kinocilin yes yes 2 0.0087839 99.688 By MS/MS By matching 1 1 11869000 6247000 5622300 6006 486 6845 15106;15107 14607 14607 884;6964 1 SSLYEGLEKPESR IRVVNAFRSSLYEGLE GLEKPESRSSIHNFMT R S S S R S 0 1 0 0 0 0 3 1 0 0 2 1 0 0 1 3 0 0 1 0 0 0 13 1 1493.7362 H0YHH6;A0A0U1RQU3;E7ERY9;P20020;H0Y7S3;Q01814 H0YHH6 107 119 ATP2B1;ATP2B2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 1;Plasma membrane calcium-transporting ATPase 2 yes no 2;3 0.00053612 97.463 By MS/MS By MS/MS 1 2 51490000 22885000 28605000 6007 390 6846 15108;15109;15110 14608;14609;14610 14608 8043 3 SSMSGLHLVK DGLALHIRSSMSGLHL MSGLHLVKQGRDRKKI R S S V K Q 0 0 0 0 0 0 0 1 1 0 2 1 1 0 0 3 0 0 0 1 0 0 10 0 1057.559 A0A0C4DGT1;Q13085 A0A0C4DGT1 77 86 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 2 0.00028672 124.6 By MS/MS By MS/MS 2 2 166530000 88905000 77625000 6008 326 6847;6848 15111;15112;15113;15114 14611;14612;14613 14612 129 572 3 SSNQTAPSLNNIIK SERAPPLKSSNQTAPS PSLNNIIKAATCEGSE K S S I K A 1 0 3 0 0 1 0 0 0 2 1 1 0 0 1 3 1 0 0 0 0 0 14 0 1485.7787 Q9UPN4;I3L2J8 Q9UPN4 201 214 CEP131 Centrosomal protein of 131 kDa yes no 2 0.0025667 86.344 By MS/MS 1 0 0 0 6009 3064 6849 15115 14614 14614 146;147 6473;6474 1 SSPELLPSGVTDENEVTTAVTEK AEEAQLARSSPELLPS VTTAVTEKVCSELDNN R S S E K V 1 0 1 1 0 0 4 1 0 0 2 1 0 0 2 3 4 0 0 3 0 0 23 0 2402.17 B1AUU8;P42566 B1AUU8 428 450 EPS15 Epidermal growth factor receptor substrate 15 yes no 2;3 4.9005E-05 116.04 By MS/MS By MS/MS 2 1 29685000 15419000 14266000 6010 533 6850 15116;15117;15118 14615;14616;14617;14618 14615 1006;1007 4 SSPELTR PPRRRSSRSSPELTRK RSSPELTRKARLSRRS R S S T R K 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 2 1 0 0 0 0 0 7 0 788.40283 Q9UQ35 Q9UQ35 1693 1699 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.02607 88.37 By MS/MS By matching 1 1 27857000 11650000 16207000 6011 3074 6851 15119;15120 14619 14619 6594;6595 1 SSPEQPIGQGR STEAPKPKSSPEQPIG EQPIGQGRIRVGTQLR K S S G R I 0 1 0 0 0 2 1 2 0 1 0 0 0 0 2 2 0 0 0 0 0 0 11 0 1154.568 Q8N201 Q8N201 1326 1336 INTS1 Integrator complex subunit 1 yes yes 2 0.002121 91.701 By MS/MS By MS/MS 1 1 41387000 25663000 15725000 6012 2461 6852 15121;15122 14620;14621;14622 14620 5034;5035 3 SSPGAVAGLSNAPGTPR GDMDGLPKSSPGAVAG SNAPGTPRDDGEMAAA K S S P R D 3 1 1 0 0 0 0 3 0 0 1 0 0 0 3 3 1 0 0 1 0 0 17 0 1537.7849 V9GYB2;U3KPY3;Q9BWG4 V9GYB2 27 43 SSBP4 Single-stranded DNA-binding protein 4 yes no 2 0.0037866 93.196 By MS/MS By MS/MS 2 2 32631000 17102000 15530000 6013 2763 6853;6854 15123;15124;15125;15126 14623;14624;14625;14626 14625 5754;5755;5756;7830 3 SSPGHRATAPQTQHVSPMR ARLNVLEKSSPGHRAT TQHVSPMRQVEPPAKK K S S M R Q 2 2 0 0 0 2 0 1 2 0 0 0 1 0 3 3 2 0 0 1 0 0 19 1 2044.0021 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;E9PPR1;E9PL12;E9PK06 E9PL71 94 112 EEF1D Elongation factor 1-delta yes no 3 0.029787 48.623 By MS/MS By matching 1 1 8236900 4633800 3603100 6014 172 6855 15127;15128 14627 14627 279;281;282 1 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR AAKQSNPKSSPGQPEA PGSSQAPRKPEGAQAR K S S P R K 7 2 0 0 0 4 5 5 0 0 0 0 0 0 7 5 0 0 0 1 0 0 36 1 3483.6251 P40222 P40222 18 53 TXLNA Alpha-taxilin yes yes 3;4 2.0686E-05 62.958 By MS/MS 2 103370000 103370000 0 6015 1810 6856 15129;15130 14628;14629 14629 3417;3418 2 SSPGQTPEEGAQALAEFAALHGPALR PERRPAERSSPGQTPE ALHGPALRASGVPERY R S S L R A 6 1 0 0 0 2 3 3 1 0 3 0 0 1 3 2 1 0 0 0 0 0 26 0 2604.2932 Q14166 Q14166 15 40 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes yes 3 3.9997E-07 114.33 By MS/MS By MS/MS 1 1 504890000 313850000 191040000 6016 2086 6857 15131;15132 14630;14631 14631 4117;4118 2 SSPLGQNDNSEYVPMLPGK FSLPNPFRSSPLGQND YVPMLPGKFLGRGLDK R S S G K F 0 0 2 1 0 1 1 2 0 0 2 1 1 0 3 3 0 0 1 1 0 0 19 0 2031.9572 O14654 O14654 817 835 IRS4 Insulin receptor substrate 4 yes yes 2;3 3.6366E-71 193.45 By MS/MS By MS/MS 8 7 1454900000 716030000 738910000 6017 1453 6858;6859;6860 15133;15134;15135;15136;15137;15138;15139;15140;15141;15142;15143;15144;15145;15146;15147 14632;14633;14634;14635;14636;14637;14638;14639;14640;14641;14642;14643;14644;14645;14646;14647 14635 58;59 522 2690;8184 16 SSPNVANQPPSPGGK MKNRADHRSSPNVANQ QPPSPGGKSAYASGTT R S S G K S 1 0 2 0 0 1 0 2 0 0 0 1 0 0 4 3 0 0 0 1 0 0 15 0 1435.7056 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1131 1145 MLLT4 Afadin yes no 2 1.1748E-33 173.77 By MS/MS By MS/MS 2 3 179930000 96117000 83809000 6018 494 6861;6862 15148;15149;15150;15151;15152 14648;14649;14650;14651;14652;14653;14654 14648 905;906;907 5 SSPPLPPPAEER ETWTPTARSSPPLPPP LPPPAEERTSAKGPET R S S E R T 1 1 0 0 0 0 2 0 0 0 1 0 0 0 5 2 0 0 0 0 0 0 12 0 1275.6459 A0A0A0MQR4;I3L2J0;Q96RK0 A0A0A0MQR4 1243 1254 CIC Protein capicua homolog yes no 2 0.013004 70.685 By MS/MS By matching 1 1 35285000 16872000 18414000 6019 186 6863 15153;15154 14655 14655 332;333 1 SSPPLRTPDVLESSGPAVR WLQDGSARSSPPLRTP ESSGPAVRSGLNATFM R S S V R S 1 2 0 1 0 0 1 1 0 0 2 0 0 0 4 4 1 0 0 2 0 0 19 1 1964.0327 A0A0A6YYC0;E9PJN1;O75676 A0A0A6YYC0 659 677 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 yes no 3 0.0047661 84.674 By MS/MS By matching 1 1 29474000 14329000 15145000 6020 280 6864 15155;15156 14656 14656 497;6919 1 SSPQLDPLR KTQLSQGRSSPQLDPL SPQLDPLRKSPTMEQA R S S L R K 0 1 0 1 0 1 0 0 0 0 2 0 0 0 2 2 0 0 0 0 0 0 9 0 1011.5349 Q8ND56 Q8ND56 182 190 LSM14A Protein LSM14 homolog A yes yes 2 0.025148 62.166 By MS/MS By matching 1 1 62789000 32677000 30112000 6021 2506 6865 15157;15158 14657 14657 5118;5119 1 SSPQLDPLRK KTQLSQGRSSPQLDPL PQLDPLRKSPTMEQAV R S S R K S 0 1 0 1 0 1 0 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 1 1139.6299 Q8ND56 Q8ND56 182 191 LSM14A Protein LSM14 homolog A yes yes 2;3 0.0027091 78.964 By MS/MS By MS/MS 2 2 54830000 25865000 28965000 6022 2506 6866 15159;15160;15161;15162 14658;14659;14660 14658 5118;5119 3 SSPSARPPDVPGQQPQAAK AEYPRRRRSSPSARPP GQQPQAAKSPSPVQGK R S S A K S 3 1 0 1 0 3 0 1 0 0 0 1 0 0 5 3 0 0 0 1 0 0 19 1 1916.9704 A0A0A6YYC7;Q96JP5 A0A0A6YYC7 82 100 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 yes no 3 0.012079 54.559 By MS/MS By matching 1 1 14894000 9138700 5755100 6023 281 6867 15163;15164 14661 14661 498;499 1 SSPSILAVQR VDGAEFWKSSPSILAV PSILAVQRSAILKKQQ K S S Q R S 1 1 0 0 0 1 0 0 0 1 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1056.5928 O14646 O14646 89 98 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes yes 2 0.0032151 93.374 By MS/MS By MS/MS 1 1 11102000 6554900 4547500 6024 1452 6868 15165;15166 14662;14663 14662 2676 2 SSPVNNHHSPGQTPTLGQPEAR LPSPPKQKSSPVNNHH TLGQPEARALHPAAVS K S S A R A 1 1 2 0 0 2 1 2 2 0 1 0 0 0 4 3 2 0 0 1 0 0 22 0 2310.1101 H0Y2V6;Q5SW79;E7EWM2;E7EMW0;Q96L14 H0Y2V6 1495 1516 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 3 0.00050564 72.564 By MS/MS By matching 2 2 75741000 37259000 38481000 6025 1112 6869;6870 15167;15168;15169;15170 14664;14665 14664 2099 1 SSQPSPTAVPASDSPPTKQEVK RDARPPRRSSQPSPTA PPTKQEVKKAGERHKL R S S V K K 2 0 0 1 0 2 1 0 0 0 0 2 0 0 5 5 2 0 0 2 0 0 22 1 2237.1176 Q3KQU3;C9JIR3;E9PLH3 Q3KQU3 112 133 MAP7D1 MAP7 domain-containing protein 1 yes no 3 0.0050408 57.798 By MS/MS 2 13053000 13053000 0 6026 2187 6871;6872 15171;15172 14666;14667 14666 4359;4360;4361 2 SSQQPSTPQQAPPGQPQQGTFVAHK AKPPAGGKSSQQPSTP QGTFVAHKEIKLTLLN K S S H K E 2 0 0 0 0 7 0 2 1 0 0 1 0 1 5 3 2 0 0 1 0 0 25 0 2630.2837 E7ERS3;Q86VM9;H3BRH3 E7ERS3 814 838 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 3 0.019278 44.933 By MS/MS By MS/MS 1 2 19102000 9717600 9384000 6027 811 6873 15173;15174;15175 14668;14669 14668 1470 2 SSRSSPELTR SRTPPRRRSSRSSPEL RSSPELTRKARLSRRS R S S T R K 0 2 0 0 0 0 1 0 0 0 1 0 0 0 1 4 1 0 0 0 0 0 10 1 1118.568 Q9UQ35 Q9UQ35 1690 1699 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.018679 52.071 By MS/MS 1 1593000 1593000 0 6028 3074 6874 15176 14670 14670 6594;6595 1 SSSADFGTFNTSQSHQTASAVSK AHFDNFPKSSSADFGT QTASAVSKVSTNKAGL K S S S K V 3 0 1 1 0 2 0 1 1 0 0 1 0 2 0 7 3 0 0 1 0 0 23 0 2344.0567 P52594;C9J2I0;B8ZZY2 P52594 291 313 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 3 8.9499E-06 118.15 By MS/MS By MS/MS 1 1 57420000 31625000 25794000 6029 1887 6875 15177;15178 14671;14672;14673 14673 3656 3 SSSADSLSTTK NKVPGLYKSSSADSLS ADSLSTTKIKPLGPAR K S S T K I 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 5 2 0 0 0 0 0 11 0 1082.5091 Q9UQ84;H0YAZ2 Q9UQ84 744 754 EXO1 Exonuclease 1 yes no 2 0.023893 62.298 By matching By MS/MS 1 1 8930800 4517400 4413400 6030 3076 6876 15179;15180 14674 14674 6611 1 SSSAEESGQDVLENTFSQK IVDIANKRSSSAEESG LENTFSQKHKELSVLL R S S Q K H 1 0 1 1 0 2 3 1 0 0 1 1 0 1 0 5 1 0 0 1 0 0 19 0 2041.9076 Q14789;E7EU81;H0Y867 Q14789 537 555 GOLGB1 Golgin subfamily B member 1 yes no 2 0.0064847 68.262 By MS/MS 1 4065200 4065200 0 6031 2108 6877 15181 14675 14675 4172 1 SSSAGGQGSYVPLLR GYPGDVDRSSSAGGQG GSYVPLLRDTDSSVAS R S S L R D 1 1 0 0 0 1 0 3 0 0 2 0 0 0 1 4 0 0 1 1 0 0 15 0 1477.7525 S4R3V8;Q86X29 S4R3V8 315 329 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.00079675 97.957 By MS/MS By matching 1 1 164500000 80438000 84065000 6032 2416 6878 15182;15183 14676 14676 8386 1 SSSAPNVHINTIEPVNIDDLIR NQFGQRDRSSSAPNVH VNIDDLIRDQGFRGDG R S S I R D 1 1 3 2 0 0 1 0 1 4 1 0 0 0 2 3 1 0 0 2 0 0 22 0 2403.2394 P15056 P15056 363 384 BRAF Serine/threonine-protein kinase B-raf yes yes 3 1.7173E-05 118.15 By MS/MS 1 34763000 0 34763000 6033 1703 6879 15184 14677 14677 3204 1 SSSEAKPTSLGLAGGHK WCNKDRKKSSSEAKPT LGLAGGHKETRERSMS K S S H K E 2 0 0 0 0 0 1 3 1 0 2 2 0 0 1 4 1 0 0 0 0 0 17 1 1625.8373 A0A0A0MQR4;I3L2J0;Q96RK0 A0A0A0MQR4 277 293 CIC Protein capicua homolog yes no 3 0.021641 50.404 By MS/MS By matching 1 1 7297500 4026300 3271300 6034 186 6880 15185;15186 14678 14678 334;335;336 1 SSSEDAESLAPR VRTGKRKRSSSEDAES DAESLAPRSKVKKIIQ R S S P R S 2 1 0 1 0 0 2 0 0 0 1 0 0 0 1 4 0 0 0 0 0 0 12 0 1247.563 Q4G0J3;H0YA82 Q4G0J3 298 309 LARP7 La-related protein 7 yes no 2 0.015881 68.463 By MS/MS By MS/MS 1 1 135980000 64886000 71090000 6035 2194 6881 15187;15188 14679;14680;14681 14680 4371;4372;4373 3 SSSELNGVSTTSVVK YKPRPVKRSSSELNGV VSTTSVVKTTGSNIPM R S S V K T 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 5 2 0 0 3 0 0 15 0 1493.7573 Q99963 Q99963 263 277 SH3GL3 Endophilin-A3 yes yes 2 1.424E-16 152.88 By MS/MS By MS/MS 4 3 84467000 55655000 28812000 6036 2738 6882;6883 15189;15190;15191;15192;15193;15194;15195 14682;14683;14684;14685;14686;14687 14684 128 5679;5680;5681 6 SSSESYTQSFQSR ETARSHQRSSSESYTQ YTQSFQSRKPFFSWW_ R S S S R K 0 1 0 0 0 2 1 0 0 0 0 0 0 1 0 6 1 0 1 0 0 0 13 0 1492.643 Q9BTU6;E9PAM4 Q9BTU6 460 472 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes no 2 0.0011126 94.465 By MS/MS 1 32926000 32926000 0 6037 2750 6884 15196 14688 14688 5718;5719 1 SSSETILSSLAGSDIVK SHRKPLKRSSSETILS LAGSDIVKGHEETCIR R S S V K G 1 0 0 1 0 0 1 1 0 2 2 1 0 0 0 6 1 0 0 1 0 0 17 0 1692.8782 Q01850 Q01850 309 325 CDR2 Cerebellar degeneration-related protein 2 yes yes 2 7.8815E-65 199.8 By MS/MS By MS/MS 1 1 120310000 77367000 42942000 6038 1983 6885 15197;15198 14689;14690 14690 3808;3809 2 SSSFGRIDRDSYSPR SRCRTKSKSSSFGRID DRDSYSPRWKGRWAND K S S P R W 0 3 0 2 0 0 0 1 0 1 0 0 0 1 1 5 0 0 1 0 0 0 15 2 1728.818 A0A0A0MTP7;F8VXG7;Q99590 A0A0A0MTP7 891 905 SCAF11 Protein SCAF11 yes no 2 0.029407 49.559 By MS/MS 1 0 0 0 6039 277 6886 15199 14691 14691 1 SSSGSSHSGSRSSSKK RSPERRHRSSSGSSHS GSRSSSKKK_______ R S S K K K 0 1 0 0 0 0 0 2 1 0 0 2 0 0 0 10 0 0 0 0 0 0 16 2 1551.7237 O95218 O95218 314 329 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.0322 44.847 By MS/MS 1 0 0 0 6040 1582 6887 15200 14692 14692 1 SSSGVLLVSSPTMPHLGTMLSPASSQTAPSSQAAAR STVSEPAKSSSGVLLV PSSQAAARVVSHSGSA K S S A R V 5 1 0 0 0 2 0 2 1 0 4 0 2 0 4 10 3 0 0 2 0 0 36 0 3510.7447 Q6P4R8;E9PQ59 Q6P4R8 757 792 NFRKB Nuclear factor related to kappa-B-binding protein yes no 3 0.00042537 57.997 By MS/MS 1 9696000 9696000 0 6041 2322 6888 15201 14693 14693 931;932 4683;7665 1 SSSHLPLIEK SRKEKSMKSSSHLPLI SHLPLIEKSFIIFSEM K S S E K S 0 0 0 0 0 0 1 0 1 1 2 1 0 0 1 3 0 0 0 0 0 0 10 0 1109.6081 J3QSE8 J3QSE8 972 981 BRIP1 yes yes 1 0.0078263 56.043 By matching By MS/MS 1 1 18395000 7866100 10529000 6042 1362 6889 15202;15203 14694 14694 2524;2525;2526 1 SSSISEEKGDSDDEKPR LSRHSPRKSSSISEEK DSDDEKPRKGERRSSR K S S P R K 0 1 0 3 0 0 3 1 0 1 0 2 0 0 1 5 0 0 0 0 0 0 17 2 1864.8286 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 148 164 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.00051356 96.379 By matching By MS/MS 1 1 65155000 42063000 23092000 6043 810 6890 15204;15205 14695 14695 1462 1 SSSLDALGPTR LKSSQGSRSSSLDALG LDALGPTRKEEEASFW R S S T R K 1 1 0 1 0 0 0 1 0 0 2 0 0 0 1 3 1 0 0 0 0 0 11 0 1102.5619 E5RI90;Q9H425 E5RI90 130 140 C1orf198 Uncharacterized protein C1orf198 yes no 2 0.0076259 77.192 By MS/MS By MS/MS 1 1 11013000 6298100 4715100 6044 782 6891 15206;15207 14696;14697 14697 1400 2 SSSLDMNR RPQPSHSRSSSLDMNR SSSLDMNRTFTVTTGQ R S S N R T 0 1 1 1 0 0 0 0 0 0 1 0 1 0 0 3 0 0 0 0 0 0 8 0 908.40218 Q96D71;E9PMG1;H0YDT0 Q96D71 560 567 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 2 0.01078 89.029 By MS/MS By MS/MS 1 1 20533000 10500000 10033000 6045 2635 6892 15208;15209 14698;14699;14700;14701 14699 5419;5420 4 SSSLEGFHNHFK PRAFPSDRSSSLEGFH EGFHNHFKVKNVLTVG R S S F K V 0 0 1 0 0 0 1 1 2 0 1 1 0 2 0 3 0 0 0 0 0 0 12 0 1388.6473 B7Z3B9;Q13480 B7Z3B9 314 325 GAB1 GRB2-associated-binding protein 1 yes no 3 0.0068415 60.691 By MS/MS By matching 1 1 28359000 13468000 14891000 6046 588 6893 15210;15211 14702 14702 1072 1 SSSLEMTPYNTPQLSPATTPANKK LPPAKPGKSSSLEMTP ATTPANKKNRLPIATR K S S K K N 2 0 2 0 0 1 1 0 0 0 2 2 1 0 4 4 4 0 1 0 0 0 24 1 2562.2636 H0Y7I9;C9IZ08;Q14C86;H0Y4E7;F8W9S7;B4DGD8;A0A0A0MQV8;B0QZ65 H0Y7I9 315 338 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 3 1.2128E-05 103.12 By MS/MS By MS/MS 2 2 27591000 16113000 11478000 6047 617 6894 15212;15213;15214;15215 14703;14704;14705 14705 240 1137;1138;1139;7008 3 SSSLESLQTAVAEVR GPTLGLKKSSSLESLQ QTAVAEVRKNDLPFHR K S S V R K 2 1 0 0 0 1 2 0 0 0 2 0 0 0 0 4 1 0 0 2 0 0 15 0 1575.8104 A0A087WZG6;A0A087X1S9;Q8TEW8;R4GN62 A0A087WZG6 670 684 PARD3B Partitioning defective 3 homolog B yes no 2 0.0036081 80.387 By MS/MS By MS/MS 1 1 8988900 4587900 4401000 6048 141 6895 15216;15217 14706;14707 14706 227;228;229 2 SSSLGSTPHEELER NPSRSGSRSSSLGSTP TPHEELERLAGLEQAI R S S E R L 0 1 0 0 0 0 3 1 1 0 2 0 0 0 1 4 1 0 0 0 0 0 14 0 1527.7165 Q9NRA8;B1AKL4 Q9NRA8 351 364 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 2 0.011361 71.344 By MS/MS By matching 1 1 27050000 15618000 11433000 6049 2906 6896 15218;15219 14708 14708 6130 1 SSSLGSYDDEQEDLTPAQLTR SHSFMRRRSSSLGSYD LTPAQLTRRIQSLKKK R S S T R R 1 1 0 3 0 2 2 1 0 0 3 0 0 0 1 4 2 0 1 0 0 0 21 0 2311.0452 E9PGM7;O94988 E9PGM7 236 256 FAM13A Protein FAM13A yes no 2 0.0042838 68.134 By MS/MS 1 9072800 9072800 0 6050 873 6897 15220 14709;14710 14709 1616 2 SSSLIQLTSQNSSPNQQR SNNPPLQRSSSLIQLT NSSPNQQRTPQVIGVM R S S Q R T 0 1 2 0 0 4 0 0 0 1 2 0 0 0 1 6 1 0 0 0 0 0 18 0 1973.9766 H7C419;O95639 H7C419 82 99 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 yes no 2;3 4.3914E-53 181.86 By MS/MS By MS/MS 2 2 120120000 51929000 68195000 6051 1286 6898 15221;15222;15223;15224 14711;14712;14713 14711 2379;2380;2381 3 SSSLKSAQGTGFELGQLQSIR DPLSSGSRSSSLKSAQ LGQLQSIRSEGTTSTS R S S I R S 1 1 0 0 0 3 1 3 0 1 3 1 0 1 0 5 1 0 0 0 0 0 21 1 2193.139 Q9C0B5;H0YEF4 Q9C0B5 427 447 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase yes no 3 0.0003371 78.708 By MS/MS By MS/MS 1 1 15339000 9597300 5741300 6052 2790 6899 15225;15226 14714;14715;14716 14715 5807;5808 3 SSSMAAGLER AENKTLPRSSSMAAGL SMAAGLERNGRMRVKA R S S E R N 2 1 0 0 0 0 1 1 0 0 1 0 1 0 0 3 0 0 0 0 0 0 10 0 1007.4706 I3L3C6;Q9UQB8;I3L0Y9;B4DWA1;I3L4C2 I3L3C6 46 55 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 2 0.0073273 61.48 By MS/MS By MS/MS 2 2 18483000 10516000 7966100 6053 1312 6900;6901 15227;15228;15229;15230 14717;14718 14717 468 2436 2 SSSMSSIDLVSASDDVHR FVQKPYSRSSSMSSID SASDDVHRFSSQVEEM R S S H R F 1 1 0 3 0 0 0 0 1 1 1 0 1 0 0 7 0 0 0 2 0 0 18 0 1891.8582 Q9Y5P4 Q9Y5P4 375 392 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 2 0.00065597 80.508 By MS/MS By MS/MS 2 2 25982000 14431000 11551000 6054 3131 6902;6903 15231;15232;15233;15234 14719;14720;14721 14719 1243 6707;6708;6709 3 SSSMSSLTGAYASGIPSSSR DHLNKRSRSSSMSSLT SGIPSSSRNAITSSYS R S S S R N 2 1 0 0 0 0 0 2 0 1 1 0 1 0 1 9 1 0 1 0 0 0 20 0 1931.8895 Q96HA1 Q96HA1 391 410 POM121 Nuclear envelope pore membrane protein POM 121 yes yes 2 0.00034852 82.765 By MS/MS By MS/MS 1 1 33097000 19833000 13263000 6055 2660 6904 15235;15236 14722;14723 14722 1060 5483;5484;5485 2 SSSMSSLTGAYTSGIPSSSR DHLNKRSRSSSMSSLT SGIPSSSRNAITSSYS R S S S R N 1 1 0 0 0 0 0 2 0 1 1 0 1 0 1 9 2 0 1 0 0 0 20 0 1961.9 A0A087WY75;A0A075B7F8;A8CG34 A0A087WY75 126 145 POM121C Nuclear envelope pore membrane protein POM 121C yes no 2 0.00033728 78.794 By MS/MS By MS/MS 2 1 51223000 43118000 8105000 6056 24 6905;6906 15237;15238;15239 14724;14725;14726 14724 11 48;49;50;51;52 2 SSSMSYVDGFIGTWPK SASGGIRRSSSMSYVD GFIGTWPKEKRSSVHG R S S P K E 0 0 0 1 0 0 0 2 0 1 0 1 1 1 1 4 1 1 1 1 0 0 16 0 1760.808 Q08AD1 Q08AD1 414 429 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 3.1617E-07 127.66 By MS/MS By MS/MS 2 2 59674000 33245000 26429000 6057 2017 6907;6908 15240;15241;15242;15243 14727;14728;14729 14727 797 3896;3897;3898;3899 3 SSSNDSVDEETAESDTSPVLEK SSVAAPEKSSSNDSVD DTSPVLEKEHQPDVDS K S S E K E 1 0 1 3 0 0 4 0 0 0 1 1 0 0 1 6 2 0 0 2 0 0 22 0 2324.998 A0A0A0MTP7;F8VXG7;Q99590 A0A0A0MTP7 340 361 SCAF11 Protein SCAF11 yes no 2;3 2.7536E-25 156.32 By MS/MS By MS/MS 2 2 73833000 31944000 41889000 6058 277 6909 15244;15245;15246;15247 14730;14731;14732;14733;14734 14733 488;489 5 SSSPAPADIAQTVQEDLR TAPEDAQKSSSPAPAD QTVQEDLRTFSWASVT K S S L R T 3 1 0 2 0 2 1 0 0 1 1 0 0 0 2 3 1 0 0 1 0 0 18 0 1883.9225 Q13283 Q13283 230 247 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2;3 5.9816E-23 155.63 By MS/MS By MS/MS 5 6 6082400000 2960400000 3122000000 6059 2055 6910;6911;6912 15248;15249;15250;15251;15252;15253;15254;15255;15256;15257;15258 14735;14736;14737;14738;14739;14740;14741;14742;14743 14739 161 4043;4044;4045 9 SSSPAPEFLASSPPDNK MAIDLAEKSSSPAPEF ASSPPDNKSPDEATAA K S S N K S 2 0 1 1 0 0 1 0 0 0 1 1 0 1 4 5 0 0 0 0 0 0 17 0 1729.8159 C9JME2;Q9Y4F1;M0QXT1 C9JME2 892 908 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 2 0.0003839 104.21 By MS/MS By MS/MS 1 1 17284000 8939700 8344400 6060 676 6913 15259;15260 14744;14745;14746 14745 1250;1251 3 SSSPATEQSWMENDFDELREEGFR ASPPPKERSSSPATEQ ELREEGFRRSNYSELR R S S F R R 1 2 1 2 0 1 5 1 0 0 1 0 1 2 1 4 1 1 0 0 0 0 24 1 2846.209 Q9UN81 Q9UN81 25 48 L1RE1 LINE-1 retrotransposable element ORF1 protein yes yes 3 3.2535E-05 83.312 By MS/MS By MS/MS 1 1 45985000 26938000 19047000 6061 3058 6914 15261;15262 14747;14748;14749 14747 1212 6457 3 SSSPEAMDPPPPK PPRPPHPRSSSPEAMD AMDPPPPKAPPFPKAE R S S P K A 1 0 0 1 0 0 1 0 0 0 0 1 1 0 5 3 0 0 0 0 0 0 13 0 1338.6126 K7ERU0;K7ENY2;Q9UK33 K7ERU0 13 25 ZNF580 Zinc finger protein 580 yes no 2 0.0019512 78.342 By MS/MS By MS/MS 1 2 11761000 5132600 6628000 6062 1387 6915 15263;15264;15265 14750;14751;14752;14753 14753 485 2554 4 SSSPEDPGAEV SRDHFRNKSSSPEDPG PEDPGAEV________ K S S E V - 1 0 0 1 0 0 2 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 11 0 1073.4513 Q9Y5U2 Q9Y5U2 319 329 TSSC4 Protein TSSC4 yes yes 2 0.0064671 88.134 By MS/MS By MS/MS 1 1 11926000 7013100 4913000 6063 3136 6916 15266;15267 14754;14755 14755 6717 1 SSSPELVTHLK FPKSDDSKSSSPELVT PELVTHLKWDDPYYDI K S S L K W 0 0 0 0 0 0 1 0 1 0 2 1 0 0 1 3 1 0 0 1 0 0 11 0 1196.6401 E9PNR6;H0YE29;Q07960 E9PNR6 49 59 ARHGAP1 Rho GTPase-activating protein 1 yes no 2;3 0.0026866 87.216 By MS/MS By MS/MS 1 2 66762000 33804000 32958000 6064 917 6917 15268;15269;15270 14756;14757;14758 14756 1709 3 SSSPGKLLGSGYGGLTGGSSR NPAGAGSRSSSPGKLL GLTGGSSRGPPVTPSS R S S S R G 0 1 0 0 0 0 0 7 0 0 3 1 0 0 1 6 1 0 1 0 0 0 21 1 1923.965 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 467 487 CLASP1 CLIP-associating protein 1 yes no 3 4.0843E-05 99.846 By MS/MS By MS/MS 1 1 12282000 8393600 3888800 6065 1043 6918 15271;15272 14759;14760 14759 1978 2 SSSPTQYGLTK ITPVNQSRSSSPTQYG PTQYGLTKNFSSLHLN R S S T K N 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 3 2 0 1 0 0 0 11 0 1167.5772 Q9NYL2 Q9NYL2 635 645 ZAK Mitogen-activated protein kinase kinase kinase MLT yes yes 2 0.0019061 99.539 By matching By MS/MS 1 1 35579000 19266000 16313000 6066 2949 6919 15273;15274 14761 14761 6220 1 SSSPTSYWK ASDDGSLKSSSPTSYW SSPTSYWKSLAPDRSD K S S W K S 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 4 1 1 1 0 0 0 9 0 1041.4767 A0A0D9SFK2;Q92614 A0A0D9SFK2 1989 1997 MYO18A Unconventional myosin-XVIIIa yes no 2 0.014566 72.096 By MS/MS By matching 1 1 13438000 7623800 5814400 6067 343 6920 15275;15276 14762 14762 607 1 SSSPVGLAK LEHRPSQRSSSPVGLA SSPVGLAKWFGSDVLQ R S S A K W 1 0 0 0 0 0 0 1 0 0 1 1 0 0 1 3 0 0 0 1 0 0 9 0 844.46543 Q9NRA8;B1AKL4 Q9NRA8 949 957 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 2 0.0092727 79.07 By MS/MS By MS/MS 1 1 72351000 41567000 30784000 6068 2906 6921 15277;15278 14763;14764 14763 6131 2 SSSPVQVEEEPVR TTPIGNARSSSPVQVE QVEEEPVRLASLRKAI R S S V R L 0 1 0 0 0 1 3 0 0 0 0 0 0 0 2 3 0 0 0 3 0 0 13 0 1441.7049 Q8IZ21;A0A0J9YVR0 Q8IZ21 116 128 PHACTR4 Phosphatase and actin regulator 4 yes no 2 0.0010796 94.781 By MS/MS By MS/MS 1 1 192420000 96183000 96235000 6069 2446 6922 15279;15280 14765;14766 14766 5002;5003 2 SSSPVTELASR SPKGGRSRSSSPVTEL PVTELASRSPIRQDRG R S S S R S 1 1 0 0 0 0 1 0 0 0 1 0 0 0 1 4 1 0 0 1 0 0 11 0 1132.5724 Q9UQ35 Q9UQ35 1101 1111 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0011794 105.36 By MS/MS By MS/MS 2 2 134710000 66047000 68665000 6070 3074 6923;6924 15281;15282;15283;15284 14767;14768;14769;14770 14767 6584;6585;6586;6587 4 SSSPVTELASRSPIR SPKGGRSRSSSPVTEL LASRSPIRQDRGEFSA R S S I R Q 1 2 0 0 0 0 1 0 0 1 1 0 0 0 2 5 1 0 0 1 0 0 15 1 1585.8424 Q9UQ35 Q9UQ35 1101 1115 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.025453 76.761 By MS/MS By MS/MS 2 1 272270000 155940000 116320000 6071 3074 6925 15285;15286;15287 14771;14772 14772 6584;6585;6586;6587;6588 2 SSSPVTELASRSPIRQDR SPKGGRSRSSSPVTEL RSPIRQDRGEFSASPM R S S D R G 1 3 0 1 0 1 1 0 0 1 1 0 0 0 2 5 1 0 0 1 0 0 18 2 1985.029 Q9UQ35 Q9UQ35 1101 1118 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.010395 60.939 By MS/MS By MS/MS 1 1 131840000 76520000 55320000 6072 3074 6926 15288;15289 14773;14774;14775 14773 6584;6585;6586;6587;6588 3 SSSQGPLSSIR ERNKPEHRSSSQGPLS QGPLSSIRAVIKRSSR R S S I R A 0 1 0 0 0 1 0 1 0 1 1 0 0 0 1 5 0 0 0 0 0 0 11 0 1117.5728 A0A0U1RQE4 A0A0U1RQE4 49 59 yes yes 2 0.010114 74.237 By matching By MS/MS 1 1 17291000 8181400 9109400 6073 379 6927 15290;15291 14776 14776 697;698 1 SSSSCNLGSSLSGFAVATGGR GGFHPWKRSSSSCNLG FAVATGGRGSGGLAGG R S S G R G 2 1 1 0 1 0 0 4 0 0 2 0 0 1 0 7 1 0 0 1 0 0 21 0 2000.9222 P0CG40 P0CG40 53 73 SP9 Transcription factor Sp9 yes yes 2 0.00023872 102.64 By MS/MS By MS/MS 1 1 12816000 7059900 5756400 6074 1669 6928 15292;15293 14777;14778 14778 3153;3154;3155 2 SSSSGSVGESSSKGPRY GSSSGGHKSSSSGSVG SSSKGPRY________ K S S R Y - 0 1 0 0 0 0 1 3 0 0 0 1 0 0 1 8 0 0 1 1 0 0 17 2 1657.7544 CON__P13645;P13645 CON__P13645 577 593 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.0071123 72.662 By MS/MS 1 0 0 0 + 6075 714 6929 15294 14779 14779 1319;1320;8112 1 SSSSLLASPGHISVK QGLHDLGRSSSSLLAS SPGHISVKEPTPSIAS R S S V K E 1 0 0 0 0 0 0 1 1 1 2 1 0 0 1 6 0 0 0 1 0 0 15 0 1468.7886 H7BXI1;A0A087WXU3;A0FGR8 H7BXI1 699 713 ESYT2 Extended synaptotagmin-2 yes no 2 7.2856E-06 125.36 By MS/MS By MS/MS 2 2 45218000 23717000 21500000 6076 113 6930 15295;15296;15297;15298 14780;14781;14782;14783 14781 199;200 4 SSSSPELQTLQDILGDPGDKADVGR QPSQPLSKSSSSPELQ GDKADVGRLSPEVKAR K S S G R L 1 1 0 4 0 2 1 3 0 1 3 1 0 0 2 4 1 0 0 1 0 0 25 1 2584.2617 H3BMQ0;P49815;H3BQK4 H3BMQ0 1329 1353 TSC2 Tuberin yes no 3 0.00028572 73.603 By MS/MS By MS/MS 1 1 15051000 8551900 6499600 6077 1230 6931 15299;15300 14784;14785 14785 2295;2296;2297 2 SSSSQTLTQFDSNIAPADPDTAIVHPVPIR QWETFSERSSSSQTLT IVHPVPIRMTPSKIHM R S S I R M 3 1 1 3 0 2 0 0 1 3 1 0 0 1 4 5 3 0 0 2 0 0 30 0 3163.5786 Q96D71;H0YE73 Q96D71 428 457 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 3 0.00096746 58.47 By MS/MS By MS/MS 1 1 27215000 14489000 12727000 6078 2635 6932 15301;15302 14786;14787 14786 5421;5422;5423 2 SSSSSASPSSPSSREEK KREQDHSRSSSSSASP SPSSREEKESKKEREE R S S E K E 1 1 0 0 0 0 2 0 0 0 0 1 0 0 2 10 0 0 0 0 0 0 17 1 1695.7548 Q9NYF8;E9PK91;H0YF63 Q9NYF8 751 767 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0060257 78.166 By matching By MS/MS 1 1 30226000 4892700 25333000 6079 2947 6933 15303;15304 14788 14788 6218 1 SSSSSSQPEHSAMLVSTAASPSLIK SHDRCLEKSSSSSSQP AASPSLIKETTTGYYK K S S I K E 3 0 0 0 0 1 1 0 1 1 2 1 1 0 2 10 1 0 0 1 0 0 25 0 2488.2115 P42166 P42166 291 315 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3 1.8298E-06 107.83 By MS/MS By MS/MS 2 2 94687000 56557000 38131000 6080 1823 6934;6935 15305;15306;15307;15308 14789;14790;14791;14792;14793 14791 690 3436;3437;7442 5 SSSSTEQSLMMGLR GHGPLRYRSSSSTEQS QSLMMGLRVEDGAQQC R S S L R V 0 1 0 0 0 1 1 1 0 0 2 0 2 0 0 5 1 0 0 0 0 0 14 0 1512.6912 Q8N1G0 Q8N1G0 1116 1129 ZNF687 Zinc finger protein 687 yes yes 2 0.016712 59.248 By MS/MS 1 4878700 0 4878700 6081 2458 6936 15309 14794 14794 994;995 5028 1 SSSSVSPSSNAPGSCSPDGVDQQLLDDFHR AQSYLTQKSSSSVSPS QLLDDFHRVTKGGSTE K S S H R V 1 1 1 4 1 2 0 2 1 0 2 0 0 1 3 9 0 0 0 2 0 0 30 0 3132.369 J3KN34;P26045 J3KN34 454 483 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 yes no 3 0.0029985 51.444 By MS/MS By matching 1 1 10606000 5488400 5118100 6082 1318 6937 15310;15311 14795 14795 2446 1 SSSTEPPPPVR TSQPSDDRSSSTEPPP TEPPPPVRQEPSPKPN R S S V R Q 0 1 0 0 0 0 1 0 0 0 0 0 0 0 4 3 1 0 0 1 0 0 11 0 1152.5775 F5H6M0;F5H047;F5H669;Q8N684;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 F5H6M0 46 56 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 2 0.00168 101.35 By MS/MS By MS/MS 1 1 35833000 19191000 16643000 6083 956 6938 15312;15313 14796;14797;14798 14796 1798;1799 3 SSSTLPVPQPSSAPPTPTR RDSSPVMRSSSTLPVP SAPPTPTRLTGANSDM R S S T R L 1 1 0 0 0 1 0 0 0 0 1 0 0 0 6 5 3 0 0 1 0 0 19 0 1905.9796 Q08999 Q08999 971 989 RBL2 Retinoblastoma-like protein 2 yes yes 2 0.0041866 89.353 By MS/MS By matching 1 1 11343000 6843800 4499600 6084 2016 6939 15314;15315 14799 14799 3888;3889;7533 1 SSSTSDILEPFTVER NEEQPLPRSSSTSDIL LEPFTVERAKGAVPVI R S S E R A 0 1 0 1 0 0 2 0 0 1 1 0 0 1 1 4 2 0 0 1 0 0 15 0 1666.805 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 795 809 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 2 8.9963E-34 175.6 By MS/MS By MS/MS 1 1 45917000 25291000 20626000 6085 420 6940 15316;15317 14800;14801 14801 786;787;788 2 SSSVGSSSSYPISPAVSR NAGGFRSRSSSVGSSS PISPAVSRTQLASWSD R S S S R T 1 1 0 0 0 0 0 1 0 1 0 0 0 0 2 9 0 0 1 2 0 0 18 0 1753.8483 Q15149 Q15149 4384 4401 PLEC Plectin yes yes 2 0.00026383 100.77 By MS/MS By MS/MS 2 2 157970000 83665000 74309000 6086 2130 6941;6942 15318;15319;15320;15321 14802;14803;14804;14805 14803 4214;4215;4216;4217 4 SSSVSPSASFR QRDRDSIKSSSVSPSA VSPSASFRGAEKHRNS K S S F R G 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 6 0 0 0 1 0 0 11 0 1110.5306 Q04727;H7C4W5;H7C4P7;Q5JSY7 Q04727 204 214 TLE4 Transducin-like enhancer protein 4 yes no 2 0.0018458 100.02 By MS/MS By MS/MS 1 1 52870000 24856000 28014000 6087 1999 6943 15322;15323 14806;14807 14806 3856 2 SSSVSPSSWKSPPASPESWK SVSSASWKSSSVSPSS PASPESWKSGPPELRK K S S W K S 1 0 0 0 0 0 1 0 0 0 0 2 0 0 4 9 0 2 0 1 0 0 20 1 2117.0065 Q96JM3 Q96JM3 372 391 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 0.0054763 91.565 By MS/MS By MS/MS 3 3 116530000 59143000 57385000 6088 2674 6944;6945 15324;15325;15326;15327;15328;15329 14808;14809;14810;14811;14812;14813 14808 5526;5527;5528;5529;5530 6 SSTDFSELEQPR NSNAYTQRSSTDFSEL FSELEQPRSCLFEQGT R S S P R S 0 1 0 1 0 1 2 0 0 0 1 0 0 1 1 3 1 0 0 0 0 0 12 0 1394.6314 Q86V48 Q86V48 956 967 LUZP1 Leucine zipper protein 1 yes yes 2 0.022293 64.104 By MS/MS By matching 1 1 15034000 8460800 6573500 6089 2406 6946 15330;15331 14814 14814 4909;4910 1 SSTDNHEAPPTSEENSSNQGKDPMIR NSKTIDHKSSTDNHEA QGKDPMIRNQRSVDPA K S S I R N 1 1 3 2 0 1 3 1 1 1 0 1 1 0 3 5 2 0 0 0 0 0 26 1 2827.2315 A0A140TA28;E9PEI6;A0A1B0GV46;A0A0G2JN73;Q3MIW9 A0A140TA28 110 135 DPCR1 Diffuse panbronchiolitis critical region protein 1 yes no 3 0.016208 42.106 By MS/MS By matching 1 1 20808000 10074000 10734000 6090 407 6947 15332;15333 14815 14815 1 SSTDSLPGPISR ERKERLMRSSTDSLPG SLPGPISRQPLGATSG R S S S R Q 0 1 0 1 0 0 0 1 0 1 1 0 0 0 2 4 1 0 0 0 0 0 12 0 1215.6095 Q9HCD5 Q9HCD5 377 388 NCOA5 Nuclear receptor coactivator 5 yes yes 2 0.0075513 72.209 By MS/MS By matching 2 2 41796000 19549000 22247000 6091 2872 6948;6949 15334;15335;15336;15337 14816;14817 14817 6046;6047;6048 2 SSTGCFSNKSDKMMNNNYDCPLPEEETNPK ARNAYTEKSSTGCFSN PEEETNPKGSGWLYHS K S S P K G 0 0 5 2 2 0 3 1 0 0 1 3 2 1 3 4 2 0 1 0 0 0 30 2 3493.4531 Q13835 Q13835 509 538 PKP1 Plakophilin-1 yes yes 3 0.028853 47.175 By MS/MS 1 0 0 0 6092 2077 6950 15338 14818 14818 830 1 SSTLSSSSMSLSPK SGSELNSRSSTLSSSS SSMSLSPKLCAEKEAA R S S P K L 0 0 0 0 0 0 0 0 0 0 2 1 1 0 1 8 1 0 0 0 0 0 14 0 1397.6708 O15119 O15119 696 709 TBX3 T-box transcription factor TBX3 yes yes 2 0.00088674 100.4 By MS/MS By matching 1 1 13670000 5632600 8037300 6093 1473 6951 15339;15340 14819 14819 2751 1 SSTPKGDMSAVNDESF STDKGSSRSSTPKGDM SAVNDESF________ R S S S F - 1 0 1 2 0 0 1 1 0 0 0 1 1 1 1 4 1 0 0 1 0 0 16 1 1670.7094 Q8N488 Q8N488 213 228 RYBP RING1 and YY1-binding protein yes yes 2 0.0099435 73.597 By matching By MS/MS 1 1 24029000 13357000 10672000 6094 2470 6952 15341;15342 14820 14820 1004 5052;5053 1 SSTPLPTISSSAENTR REQGTESRSSTPLPTI SSSAENTRQNGSNDSD R S S T R Q 1 1 1 0 0 0 1 0 0 1 1 0 0 0 2 5 3 0 0 0 0 0 16 0 1646.8111 P42166;G5E972;P42167;H0YJH7 G5E972 158 173 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2;3 4.2242E-05 121.32 By MS/MS By MS/MS 4 5 520520000 268040000 252480000 6095 1097;1823 6953;6954 15343;15344;15345;15346;15347;15348;15349;15350;15351 14821;14822;14823;14824;14825;14826;14827;14828 14822 2067;2068;2069;2070;2071;7184 8 SSTPPGESYFGVSSLQLK LSLCAGVKSSTPPGES GVSSLQLKGQSQTSPD K S S L K G 0 0 0 0 0 1 1 2 0 0 2 1 0 1 2 5 1 0 1 1 0 0 18 0 1882.9313 Q9UQ35 Q9UQ35 1041 1058 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 2.1654E-23 154.72 By MS/MS By MS/MS 2 2 940700000 548060000 392630000 6096 3074 6955 15352;15353;15354;15355 14829;14830;14831;14832 14832 6596;6597;7934 4 SSTPPRQSPSR GSSPPRVKSSTPPRQS PPRQSPSRSSSPQPKV K S S S R S 0 2 0 0 0 1 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 11 1 1198.6054 Q9UQ35;I3L4D8;I3L182 Q9UQ35 901 911 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.028889 51.009 By MS/MS By matching 1 1 13994000 1943100 12051000 6097 3074 6956 15356;15357 14833 14833 6598;6599 0 SSTPPRQSPSRSSSPQPK GSSPPRVKSSTPPRQS RSSSPQPKVKAIISPR K S S P K V 0 2 0 0 0 2 0 0 0 0 0 1 0 0 5 7 1 0 0 0 0 0 18 2 1909.9606 Q9UQ35;I3L4D8;I3L182 Q9UQ35 901 918 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.027696 43.841 By MS/MS By matching 1 1 7040500 3031100 4009400 6098 3074 6957 15358;15359 14834 14834 6598;6599;6600;6601 1 SSTPSHGQTTATEPTPAQK PSNATAPRSSTPSHGQ TEPTPAQKTPAKVVYV R S S Q K T 2 0 0 0 0 2 1 1 1 0 0 1 0 0 3 3 5 0 0 0 0 0 19 0 1924.9126 O00512 O00512 153 171 BCL9 B-cell CLL/lymphoma 9 protein yes yes 3 0.012007 61.167 By MS/MS By matching 1 1 10114000 4609200 5504900 6099 1441 6958 15360;15361 14835 14835 7284 0 SSTSFANIQENSN LILPKRLKSSTSFANI ANIQENSN________ K S S S N - 1 0 3 0 0 1 1 0 0 1 0 0 0 1 0 4 1 0 0 0 0 0 13 0 1397.6059 Q86WC4 Q86WC4 322 334 OSTM1 Osteopetrosis-associated transmembrane protein 1 yes yes 2 2.6069E-26 174.21 By MS/MS By MS/MS 2 2 47490000 22318000 25173000 6100 2411 6959 15362;15363;15364;15365 14836;14837;14838;14839 14837 4915;4916;4917;7700 4 SSTVTEAPIAVVTSR NAPTKRPRSSTVTEAP PIAVVTSRTSEVYVWG R S S S R T 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 3 3 0 0 3 0 0 15 0 1516.8097 Q8TD19 Q8TD19 331 345 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2;3 2.3889E-05 124.16 By MS/MS By MS/MS 3 4 131210000 71242000 59964000 6101 2538 6960 15366;15367;15368;15369;15370;15371;15372 14840;14841;14842;14843;14844;14845;14846 14842 5181;5182;7742 7 SSVELPPYSGTVLCGTQAVDKLPDGQEYQR NQFFVTPRSSVELPPY PDGQEYQRIEFGVDEV R S S Q R I 1 1 0 2 1 3 2 3 0 0 3 1 0 0 3 3 2 0 2 3 0 0 30 1 3293.5874 Q14694;H3BQC6 Q14694 27 56 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 3 0.02906 41.214 By MS/MS By matching 1 1 13229000 5385000 7844400 6102 2106 6961 15373;15374 14847 14847 0 SSVKTPESIVPIAPELQPSTSR ATRGRTNRSSVKTPES ELQPSTSRNQLVTPEP R S S S R N 1 1 0 0 0 1 2 0 0 2 1 1 0 0 4 5 2 0 0 2 0 0 22 1 2322.2431 Q14676 Q14676 1563 1584 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 1.8344E-05 119.66 By MS/MS By MS/MS 1 1 33249000 16203000 17046000 6103 2098 6962 15375;15376 14848;14849 14849 4147;4148 2 SSVLRVSQK SPPEVTGRSSVLRVSQ SVLRVSQKENVPPKNL R S S Q K E 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 3 0 0 0 2 0 0 9 1 1002.5822 Q9Y6A5;F8WC55;Q8IX09;C9JWI7;E7EMT0;C9JA91 Q9Y6A5 33 41 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 yes no 2 0.0073991 88.596 By matching By MS/MS 1 1 18508000 10340000 8167500 6104 3146 6963 15377;15378 14850 14850 6731 1 SSVSDAPVHITASGEPVPISEESEELDQK DGRERSKKSSVSDAPV ESEELDQKTFSICKER K S S Q K T 2 0 0 2 0 1 5 1 1 2 1 1 0 0 3 6 1 0 0 3 0 0 29 0 3036.4411 O14646;H0Y8V4;A0A087WVF4 O14646 1384 1412 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 3 0.01548 43.07 By MS/MS By MS/MS 1 1 22485000 10453000 12032000 6105 1452 6964 15379;15380 14851;14852 14852 2677;2678 2 SSYYMIGEQK LVIMDALKSSYYMIGE YYMIGEQKFSSLPLGR K S S Q K F 0 0 0 0 0 1 1 1 0 1 0 1 1 0 0 2 0 0 2 0 0 0 10 0 1204.5434 P40261 P40261 201 210 NNMT Nicotinamide N-methyltransferase yes yes 1 0.012706 46.462 By MS/MS 1 41941000 0 41941000 6106 1811 6965 15381 14853 14853 8259;8260 0 STAALEEDAQILK DEEFASRKSTAALEED EEDAQILKVIEAYCTS K S T L K V 3 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 13 0 1387.7195 B1ALK7;E9PDQ5;Q14155;Q15052 B1ALK7 525 537 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 no no 2 2.4922E-11 146.79 By MS/MS 1 3817800 0 3817800 6107 527;2123 6966 15382 14854 14854 990;6984 1 STAGDTHLGGEDFDNR EDGIFEVKSTAGDTHL GGEDFDNRMVNHFIAE K S T N R M 1 1 1 3 0 0 1 3 1 0 1 0 0 1 0 1 2 0 0 0 0 0 16 0 1690.7183 P11142;E9PKE3;E9PN89;P54652 P11142 221 236 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 0.0053013 82.85 By MS/MS 1 9191100 0 9191100 6108 1680 6967 15383 14855 14855 1 STAPETAIECTQAPAPASEDEK IEGEKEVKSTAPETAI APASEDEKVVVEPPEG K S T E K V 5 0 0 1 1 1 4 0 0 1 0 1 0 0 3 2 3 0 0 0 0 0 22 0 2302.0271 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 1578 1599 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2;3 0.00014619 93.062 By MS/MS By MS/MS 2 2 64257000 38032000 26225000 6109 319 6968 15384;15385;15386;15387 14856;14857;14858 14858 558 3 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR GSAGGEKRSTAPSAAA LEHCGVCRERLRPERE R S T C R E 12 1 0 0 2 0 3 4 1 0 3 0 0 0 2 7 1 0 0 1 0 0 37 0 3441.5889 Q13263 Q13263 33 69 TRIM28 Transcription intermediary factor 1-beta yes yes 3;4 3.0999E-06 68.434 By MS/MS By MS/MS 4 3 740530000 381490000 359040000 6110 2054 6969 15388;15389;15390;15391;15392;15393;15394 14859;14860;14861;14862;14863;14864 14860 4040;4041 6 STAQQELDGKPASPTPVIVASHTANK GKDFQPSRSTAQQELD VASHTANKEEKSLLEL R S T N K E 4 0 1 1 0 2 1 1 1 1 1 2 0 0 3 3 3 0 0 2 0 0 26 1 2646.3613 P35606;H0YAC7 P35606 847 872 COPB2 Coatomer subunit beta yes no 3;4 1.8138E-11 106.56 By MS/MS By MS/MS 2 1 47447000 41997000 5450500 6111 1798 6970 15395;15396;15397 14865;14866;14867 14866 3393;7433 2 STAQQELDGKPASPTPVIVASHTANKEEK GKDFQPSRSTAQQELD HTANKEEKSLLELEVD R S T E K S 4 0 1 1 0 2 3 1 1 1 1 3 0 0 3 3 3 0 0 2 0 0 29 2 3032.5415 P35606;H0YAC7 P35606 847 875 COPB2 Coatomer subunit beta yes no 3;4;5 1.2931E-19 143.47 By MS/MS By MS/MS 3 3 938160000 357690000 580480000 6112 1798 6971 15398;15399;15400;15401;15402;15403 14868;14869;14870;14871;14872;14873;14874 14873 3393;7433 7 STATLPLSFK DVNSSVGKSTATLPLS ATLPLSFKEATLAKRF K S T F K E 1 0 0 0 0 0 0 0 0 0 2 1 0 1 1 2 2 0 0 0 0 0 10 0 1063.5914 P20309 P20309 450 459 CHRM3 Muscarinic acetylcholine receptor M3 yes yes 2 0.0034366 96.334 By MS/MS By MS/MS 1 1 6032900 3204300 2828700 6113 1738 6972 15404;15405 14875;14876 14876 3273 2 STDSSSVSGSLQQETK RSERRKRRSTDSSSVS GSLQQETKYILPTLEK R S T T K Y 0 0 0 1 0 2 1 1 0 0 1 1 0 0 0 6 2 0 0 1 0 0 16 0 1639.7537 Q9H8G2 Q9H8G2 89 104 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 2 6.4428E-07 130.47 By MS/MS By MS/MS 1 1 22196000 11716000 10480000 6114 2854 6973 15406;15407 14877;14878 14877 6016;7858 2 STELLIR REIRRYQKSTELLIRK KSTELLIRKLPFQRLV K S T I R K 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 7 0 830.48617 K7EMV3;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431;K7EP01;Q5TEC6;Q6NXT2 K7EMV3 58 64 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2;H3F3C Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 2 0.0094542 130.27 By MS/MS By MS/MS 2 2 128180000 71049000 57135000 6115 544 6974;6975 15408;15409;15410;15411 14879;14880;14881 14881 1020 3 STELVLSPDMPR SEKAEMKRSTELVLSP VLSPDMPRTTNESLLT R S T P R T 0 1 0 1 0 0 1 0 0 0 2 0 1 0 2 2 1 0 0 1 0 0 12 0 1343.6755 Q8TDY2 Q8TDY2 237 248 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 2 8.9693E-10 136.3 By MS/MS By MS/MS 3 2 27332000 13132000 14201000 6116 2541 6976;6977 15412;15413;15414;15415;15416 14882;14883;14884;14885;14886 14883 1019 5188;5189;7746 5 STEPELIQVK YVDRTESRSTEPELIQ EPELIQVKSELPLDPL R S T V K S 0 0 0 0 0 1 2 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1142.6183 M0QXM4;Q15758 M0QXM4 317 326 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) yes no 2 0.0030419 92.611 By MS/MS By MS/MS 1 1 18147000 9450100 8697200 6117 1402 6978 15417;15418 14887;14888 14888 2578;7271 2 STESLQANVQR VDPRRRNKSTESLQAN SLQANVQRLKEYRSKL K S T Q R L 1 1 1 0 0 2 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 11 0 1231.6157 P26373;J3QSB4 P26373 106 116 RPL13 60S ribosomal protein L13 yes no 2 0.0019461 107.69 By MS/MS By MS/MS 1 1 9241400 4952500 4288900 6118 1767 6979 15419;15420 14889;14890 14889 2 STETSDFENIESPLNER GDNGDSSKSTETSDFE IESPLNERDSSASVDN K S T E R D 0 1 2 1 0 0 4 0 0 1 1 0 0 1 1 3 2 0 0 0 0 0 17 0 1966.8756 Q96K76 Q96K76 899 915 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 2 5.7806E-65 199.91 By MS/MS By MS/MS 1 1 24590000 13742000 10848000 6119 2677 6980 15421;15422 14891;14892 14892 5534 2 STFAGSPER KEHLRDTKSTFAGSPE TFAGSPERESIHILSV K S T E R E 1 1 0 0 0 0 1 1 0 0 0 0 0 1 1 2 1 0 0 0 0 0 9 0 950.44576 H0YE03;H7C3G7;Q2TBE0 H0YE03 355 363 CWF19L2 CWF19-like protein 2 yes no 2 0.023724 63.408 By matching By MS/MS 1 1 22450000 10994000 11456000 6120 1172 6981 15423;15424 14893 14893 2217 1 STFAGSPERESIHILSVDEK KEHLRDTKSTFAGSPE HILSVDEKNKLGAKII K S T E K N 1 1 0 1 0 0 3 1 1 2 1 1 0 1 1 4 1 0 0 1 0 0 20 1 2201.0964 H0YE03;H7C3G7;Q2TBE0 H0YE03 355 374 CWF19L2 CWF19-like protein 2 yes no 3 0.00093486 73.688 By MS/MS By MS/MS 1 1 41615000 23015000 18600000 6121 1172 6982 15425;15426 14894;14895 14895 2217 2 STFREESPLR KNLDAREKSTFREESP FREESPLRIKMIASDS K S T L R I 0 2 0 0 0 0 2 0 0 0 1 0 0 1 1 2 1 0 0 0 0 0 10 1 1220.6149 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 525 534 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 0.016344 54.005 By MS/MS 1 180980000 180980000 0 6122 2947;888 6983 15427 14896;14897 14896 1666 2 STFSPISDIGLAK PVNSSKWKSTFSPISD ISDIGLAKSADSPLQA K S T A K S 1 0 0 1 0 0 0 1 0 2 1 1 0 1 1 3 1 0 0 0 0 0 13 0 1334.7082 Q8TEK3;H7C2S2 Q8TEK3 1243 1255 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes no 2 0.0015116 107.46 By MS/MS By MS/MS 1 1 11954000 6616600 5337400 6123 2544 6984 15428;15429 14898;14899 14899 5198 2 STGEAFVQFASQEIAEK LPVDFQGRSTGEAFVQ ASQEIAEKALKKHKER R S T E K A 3 0 0 0 0 2 3 1 0 1 0 1 0 2 0 2 1 0 0 1 0 0 17 0 1840.8843 E5RGV0;D6RIU0;D6RBM0;E9PCY7;G8JLB6;P31943;E5RGH4;E7EN40;P55795;H0YB39 E5RGV0 99 115 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 yes no 2 4.5931E-06 127.79 By MS/MS By MS/MS 1 1 20911000 8513000 12398000 6124 753 6985 15430;15431 14900;14901 14901 2 STGGAPTFNVTVTK FSMDLRTKSTGGAPTF TFNVTVTKTDKTLVLL K S T T K T 1 0 1 0 0 0 0 2 0 0 0 1 0 1 1 1 4 0 0 2 0 0 14 0 1378.7092 P07737;K7EJ44 P07737 92 105 PFN1 Profilin-1 yes no 2 0.0014934 97.163 By matching By MS/MS 1 1 22007000 8930200 13076000 6125 1654 6986 15432;15433 14902 14902 1 STGQLNMNPGTTSGNTATAERSR SKLTASRKSTGQLNMN TATAERSRHQRSFSVP K S T S R H 2 2 3 0 0 1 1 3 0 0 1 0 1 0 1 3 5 0 0 0 0 0 23 1 2350.0931 A0A0C4DFX2;Q5TBA9 A0A0C4DFX2 1954 1976 FRY Protein furry homolog yes no 3 0.020176 50.884 By MS/MS 1 6558300 6558300 0 6126 299 6987 15434 14903 14903 526;527 0 STGSATSLASQGER SESGMTVRSTGSATSL SLASQGERRRRTLPQL R S T E R R 2 1 0 0 0 1 1 2 0 0 1 0 0 0 0 4 2 0 0 0 0 0 14 0 1350.6375 H0Y2V6;Q5SW79 H0Y2V6 591 604 CEP170 Centrosomal protein of 170 kDa yes no 2 0.00066272 102.64 By MS/MS By MS/MS 1 2 25444000 12308000 13136000 6127 1112 6988 15435;15436;15437 14904;14905 14904 2100 2 STGVVNIPAAECLDEYEDDEAGQKER RKLREKRRSTGVVNIP DEAGQKERKREDAITQ R S T E R K 3 1 1 3 1 1 5 2 0 1 1 1 0 0 1 1 1 0 1 2 0 0 26 1 2894.2876 Q96IZ0;H0YI16 Q96IZ0 162 187 PAWR PRKC apoptosis WT1 regulator protein yes no 3 0.0027332 62.781 By MS/MS By matching 1 1 24354000 12211000 12143000 6128 2669 6989 15438;15439 14906 14906 8425 1 STIGVMVTASHNPEEDNGVK VLRSKQTKSTIGVMVT PEEDNGVKLVDPLGEM K S T V K L 1 0 2 1 0 0 2 2 1 1 0 1 1 0 1 2 2 0 0 3 0 0 20 0 2083.9844 D6RC77;D6RCQ8;D6RF77;O95394 D6RC77 83 102 PGM3 Phosphoacetylglucosamine mutase yes no 3 0.028447 42.813 By MS/MS By MS/MS 1 1 19958000 8992700 10966000 6129 754 6990 15440;15441 14907;14908 14907 288 1 STKPVVFSPTLMLTDEEK SGKVIPDRSTKPVVFS LMLTDEEKARIHAETA R S T E K A 0 0 0 1 0 0 2 0 0 0 2 2 1 1 2 2 3 0 0 2 0 0 18 1 2021.0391 P40818;A0A075B720 P40818 445 462 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes no 3 0.00091735 83.964 By MS/MS By MS/MS 1 1 7911500 2846800 5064600 6130 1813 6991 15442;15443 14909;14910;14911 14911 686 3420 3 STKYEMYSKNAEK GETVNNYRSTKYEMYS MYSKNAEKPSRSKRTI R S T E K P 1 0 1 0 0 0 2 0 0 0 0 3 1 0 0 2 1 0 2 0 0 0 13 2 1577.7396 H0Y8J2;Q03188 H0Y8J2 304 316 CENPC Centromere protein C yes no 2 0.0096221 67.136 By MS/MS 1 0 0 0 6131 1148 6992 15444 14912 14912 2183;7204;8155;8156 1 STLNPQWNESFTFK KQKTKTIRSTLNPQWN WNESFTFKLKPSDKDR R S T F K L 0 0 2 0 0 1 1 0 0 0 1 1 0 2 1 2 2 1 0 0 0 0 14 0 1697.8049 P17252;J3KRN5 P17252 217 230 PRKCA Protein kinase C alpha type yes no 2 0.0077476 75.968 By matching By MS/MS 1 1 16814000 7882000 8931600 6132 1714 6993 15445;15446 14913 14913 3222 1 STLTTLPFPGAEANSPGKAEAEKPR VDINGESRSTLTTLPF KAEAEKPRCSSTPCSP R S T P R C 4 1 1 0 0 0 3 2 0 0 2 2 0 1 4 2 3 0 0 0 0 0 25 2 2568.3184 Q96GV9 Q96GV9 11 35 C5orf30 UNC119-binding protein C5orf30 yes yes 3 1.7637E-05 86.439 By MS/MS By MS/MS 1 1 19744000 10654000 9090600 6133 2655 6994 15447;15448 14914;14915;14916;14917 14915 5478 4 STPAPKEEEKVNEEQWSLR SMPYKRRRSTPAPKEE NEEQWSLREVVFVEDV R S T L R E 1 1 1 0 0 1 5 0 0 0 1 2 0 0 2 2 1 1 0 1 0 0 19 2 2256.1022 E7EMW7;O95071 E7EMW7 630 648 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 3 0.01215 76.417 By matching By MS/MS 1 1 22363000 8619600 13743000 6134 793 6995 15449;15450 14918 14918 1413;7068 0 STPFIVPSSPTEQEGR APSPDAFRSTPFIVPS SPTEQEGRQDKPMDTS R S T G R Q 0 1 0 0 0 1 2 1 0 1 0 0 0 1 3 3 2 0 0 1 0 0 16 0 1730.8475 Q12888;A6NNK5;C9JXV0 Q12888 372 387 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2;3 8.5241E-05 99.011 By MS/MS By MS/MS 2 3 915840000 317410000 598430000 6135 2031 6996 15451;15452;15453;15454;15455 14919;14920;14921 14921 3970;3971 3 STPLASPSPSPGRSPQR SILRSTLRSTPLASPS SPGRSPQRLKETRISF R S T Q R L 1 2 0 0 0 1 0 1 0 0 1 0 0 0 5 5 1 0 0 0 0 0 17 1 1720.8856 Q8WYP5 Q8WYP5 1209 1225 AHCTF1 Protein ELYS yes yes 3 0.010707 56.872 By MS/MS By matching 1 1 25193000 12529000 12665000 6136 2575 6997 15456;15457 14922 14922 5282;5283 1 STPSESPRTK DATFSSQKSTPSESPR PSESPRTKKFPLTEEE K S T T K K 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 3 2 0 0 0 0 0 10 1 1088.5462 A8K855 A8K855 16 25 EFCAB7 EF-hand calcium-binding domain-containing protein 7 yes yes 1 0.026468 49.442 By matching By MS/MS 1 1 25433000 18132000 7300700 6137 493 6998 15458;15459 14923 14923 895;896;897 0 STPSHGSVSSLNSTGSLSPK PPPKDSLRSTPSHGSV STGSLSPKHSLKQTQP R S T P K H 0 0 1 0 0 0 0 2 1 0 2 1 0 0 2 8 2 0 0 1 0 0 20 0 1928.9439 M0R165;Q9UBC2;M0R2S2 M0R165 238 257 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 2;3 0.00036472 121.5 By MS/MS By MS/MS 3 3 165570000 74455000 91116000 6138 1422 6999;7000 15460;15461;15462;15463;15464;15465 14924;14925;14926;14927;14928 14928 2612;2613;2614;7280 4 STPVPEVVQELPLTSPVDDFR FYPESSYKSTPVPEVV TSPVDDFRQPRYSSGG K S T F R Q 0 1 0 2 0 1 2 0 0 0 2 0 0 1 4 2 2 0 0 4 0 0 21 0 2324.19 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 344 364 OCLN Occludin yes no 2 0.021968 61.444 By MS/MS By matching 1 1 10908000 5100400 5807500 6139 357 7001 15466;15467 14929 14929 641;6935 1 STPVPEVVQELPLTSPVDDFRQPR FYPESSYKSTPVPEVV VDDFRQPRYSSGGNFE K S T P R Y 0 2 0 2 0 2 2 0 0 0 2 0 0 1 5 2 2 0 0 4 0 0 24 1 2705.4024 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 344 367 OCLN Occludin yes no 3 0.0095225 51.688 By MS/MS 1 21172000 21172000 0 6140 357 7002 15468 14930 14930 641;6935 1 STQESLTAGGTDLK PATRVTRRSTQESLTA TAGGTDLKRELHPPAT R S T L K R 1 0 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 14 0 1406.6889 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 304 317 LRRC41 Leucine-rich repeat-containing protein 41 yes no 2 0.009765 73.386 By MS/MS 1 2734900 2734900 0 6141 43 7003 15469 14931 14931 82;6842 1 STQESLTAGGTDLKR PATRVTRRSTQESLTA AGGTDLKRELHPPATS R S T K R E 1 1 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 15 1 1562.79 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 304 318 LRRC41 Leucine-rich repeat-containing protein 41 yes no 2 0.0034392 84.195 By MS/MS By MS/MS 1 1 25501000 13435000 12065000 6142 43 7004 15470;15471 14932;14933 14932 82;6842 2 STQIENQHQGAQDTSDLMSPSKR FYINYVTRSTQIENQH DLMSPSKRSSQKYIIE R S T K R S 1 1 1 2 0 4 1 1 1 1 1 1 1 0 1 4 2 0 0 0 0 0 23 1 2557.1827 H0YBW3;Q9NVR2 H0YBW3 10 32 INTS10 Integrator complex subunit 10 yes no 3 0.018269 46.099 By MS/MS By matching 1 1 11400000 6981300 4418300 6143 1165 7005 15472;15473 14934 14934 2211 1 STSAPQMSPGSSDNQSSSPQPAQQK PSSPLPSKSTSAPQMS SPQPAQQKLKQQKKKA K S T Q K L 2 0 1 1 0 5 0 1 0 0 0 1 1 0 4 8 1 0 0 0 0 0 25 0 2531.1194 F8W726;Q14157 F8W726 471 495 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 1.1801E-06 111.44 By MS/MS By MS/MS 5 5 268070000 141660000 126410000 6144 1035 7006;7007;7008 15474;15475;15476;15477;15478;15479;15480;15481;15482;15483 14935;14936;14937;14938;14939;14940;14941;14942;14943 14940 376 1949;1950;1951;1952;1953;1954;1955;7162 9 STSATDTHHVEMAR PALALRARSTSATDTH THHVEMARERSKTVTS R S T A R E 2 1 0 1 0 0 1 0 2 0 0 0 1 0 0 2 3 0 0 1 0 0 14 0 1541.6893 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874 H3BQP2 31 44 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes no 3 0.002458 73.279 By MS/MS By MS/MS 1 1 60059000 34037000 26022000 6145 1235 7009 15484;15485 14944;14945;14946 14946 2306;2307;7227 3 STSDGSPVMAVMPGTTDTIQVLK YLDGNANKSTSDGSPV TDTIQVLKGRMDSEQS K S T L K G 1 0 0 2 0 1 0 2 0 1 1 1 2 0 2 3 4 0 0 3 0 0 23 0 2334.1447 Q9UPY3 Q9UPY3 1250 1272 DICER1 Endoribonuclease Dicer yes yes 2 0.025591 47.822 By MS/MS 1 4510300 0 4510300 6146 3071 7010 15486 14947 14947 1218;1219 6498 1 STSLNERPK EKDSFRARSTSLNERP TSLNERPKRIQTSLTS R S T P K R 0 1 1 0 0 0 1 0 0 0 1 1 0 0 1 2 1 0 0 0 0 0 9 1 1030.5407 H3BMQ0;P49815 H3BMQ0 948 956 TSC2 Tuberin yes no 2 0.019801 77.288 By MS/MS By MS/MS 1 1 12949000 8107500 4841500 6147 1230 7011 15487;15488 14948;14949 14948 2298 2 STSLSALVR PSRTHKERSTSLSALV TSLSALVRSSPHGSLG R S T V R S 1 1 0 0 0 0 0 0 0 0 2 0 0 0 0 3 1 0 0 1 0 0 9 0 932.5291 R4GNB2;R4GN35;Q5VZ89;X6RAE7;X6R5W5;A0A0A0MRX3 R4GNB2 1323 1331 DENND4C DENN domain-containing protein 4C yes no 2 0.0042276 105.4 By MS/MS By MS/MS 1 1 79073000 46296000 32777000 6148 2281 7012 15489;15490 14950;14951 14951 4583 1 STSPAGQHHSPISSR REKRDKPRSTSPAGQH HHSPISSRHHSSSSQS R S T S R H 1 1 0 0 0 1 0 1 2 1 0 0 0 0 2 5 1 0 0 0 0 0 15 0 1547.7441 Q5T200 Q5T200 316 330 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 0.032254 50.484 By matching By MS/MS 1 1 11773000 5324400 6448100 6149 2238 7013 15491;15492 14952 14952 1 STSPFGIPEEASEMLEAKPK LFHGVGFRSTSPFGIP EMLEAKPKNLELSPEG R S T P K N 2 0 0 0 0 0 4 1 0 1 1 2 1 1 3 3 1 0 0 0 0 0 20 1 2147.0456 Q96D09 Q96D09 510 529 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 3 0.00018767 106.87 By MS/MS By MS/MS 2 3 29637000 16590000 13047000 6150 2634 7014;7015 15493;15494;15495;15496;15497 14953;14954;14955;14956;14957 14957 1054 5415 5 STSPIIGSPPVR SERALPRRSTSPIIGS IIGSPPVRAVPIGTPP R S T V R A 0 1 0 0 0 0 0 1 0 2 0 0 0 0 3 3 1 0 0 1 0 0 12 0 1209.6717 Q86TB9 Q86TB9 177 188 PATL1 Protein PAT1 homolog 1 yes yes 2 0.0040653 82.705 By MS/MS By MS/MS 1 1 78755000 42663000 36092000 6151 2397 7016 15498;15499 14958;14959;14960 14960 4891;4892;4893 3 STSPVTDPSIPIR IRKTKGNRSTSPVTDP TDPSIPIRKKSKDGKG R S T I R K 0 1 0 1 0 0 0 0 0 2 0 0 0 0 3 3 2 0 0 1 0 0 13 0 1368.7249 A0A087WU18;Q99607 A0A087WU18 186 198 ELF4 ETS-related transcription factor Elf-4 yes no 2 0.017535 67.118 By matching By MS/MS 1 1 30323000 15668000 14655000 6152 49 7017 15500;15501 14961 14961 90 1 STSQGSINSPVYSR VRDRMIHRSTSQGSIN INSPVYSRHSYTPTTS R S T S R H 0 1 1 0 0 1 0 1 0 1 0 0 0 0 1 5 1 0 1 1 0 0 14 0 1481.711 J3QSX6;F8W8M4;A0A0A0MRL6;O14639;H0Y7N6;F6XFR5 J3QSX6 108 121 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.0013119 91.961 By MS/MS By MS/MS 1 1 54017000 24327000 29690000 6153 220 7018 15502;15503 14962;14963 14963 385 2 STSRDRLDDIIVLTK RGKEKVRRSTSRDRLD DDIIVLTKDIQEGDTL R S T T K D 0 2 0 3 0 0 0 0 0 2 2 1 0 0 0 2 2 0 0 1 0 0 15 2 1730.9527 G5E9N8;Q7Z3D4 G5E9N8 53 67 LYSMD3 LysM and putative peptidoglycan-binding domain-containing protein 3 yes no 3 0.012656 69.979 By MS/MS By MS/MS 1 1 16222000 8376900 7845500 6154 1100 7019 15504;15505 14964;14965 14965 2081;2082;7186 2 STSSENNSLDTDDHFKPSPR KPRILSIKSTSSENNS DHFKPSPRPRSMLKKK K S T P R P 0 1 2 3 0 0 1 0 1 0 1 1 0 1 2 5 2 0 0 0 0 0 20 1 2232.9883 A8MSM7;A2VCS9 A8MSM7 85 104 MAP9 yes no 3 0.031621 44.539 By MS/MS By matching 1 1 7367400 4197100 3170300 6155 456 7020 15506;15507 14966 14966 1 STSSTSSGSNSNALVPVSWK PKVIAVTRSTSSTSSG ALVPVSWKRPQLSQRR R S T W K R 1 0 2 0 0 0 0 1 0 0 1 1 0 0 1 8 2 1 0 2 0 0 20 0 1994.9545 H0Y9X0;O94915 H0Y9X0 1200 1219 FRYL Protein furry homolog-like yes no 3 0.023245 47.646 By MS/MS 1 3367500 0 3367500 6156 1154 7021 15508 14967 14967 2188;2189 0 STSTLEIQPSRASPTSDIESVER SPTSSPERSTSTLEIQ SDIESVERKIYKAYKW R S T E R K 1 2 0 1 0 1 3 0 0 2 1 0 0 0 2 6 3 0 0 1 0 0 23 1 2489.2245 Q96JK2 Q96JK2 636 658 DCAF5 DDB1- and CUL4-associated factor 5 yes yes 3 0.00024471 77.037 By MS/MS By MS/MS 1 1 19960000 10965000 8995200 6157 2673 7022 15509;15510 14968;14969;14970 14970 5506;5507 3 STSTLYSQFQTAESENR GSRQAARRSTSTLYSQ QTAESENRSYEGTLYK R S T N R S 1 1 1 0 0 2 2 0 0 0 1 0 0 1 0 4 3 0 1 0 0 0 17 0 1947.881 G5E933;O95248;H0Y5W8 G5E933 1747 1763 SBF1 Myotubularin-related protein 5 yes no 2 0.00042717 106.19 By MS/MS By MS/MS 1 1 13241000 8226300 5014500 6158 1095 7023 15511;15512 14971;14972 14972 2057;7179;7180 2 STSTPNVHMVSTTLPVDSR GSLSQRQRSTSTPNVH TTLPVDSRMIEDAIRS R S T S R M 0 1 1 1 0 0 0 0 1 0 1 0 1 0 2 4 4 0 0 3 0 0 19 0 2027.9946 H7C155;P04049 H7C155 136 154 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 3 8.4749E-05 113.23 By MS/MS By MS/MS 1 1 33002000 16375000 16628000 6159 1274 7024 15513;15514 14973;14974 14973 2362 2 STSTPTSPGPR KPLLSVNKSTSTPTSP TPTSPGPRTHSTPSIP K S T P R T 0 1 0 0 0 0 0 1 0 0 0 0 0 0 3 3 3 0 0 0 0 0 11 0 1086.5306 Q8WWM7;H3BUF6;H3BRB0;A0A0C4DGL7 Q8WWM7 678 688 ATXN2L Ataxin-2-like protein yes no 2 0.00077999 109.16 By MS/MS By MS/MS 1 1 55151000 32101000 23051000 6160 2564 7025 15515;15516 14975;14976;14977;14978 14976 5247;7750 4 STSYQELSEELVQVVENSELADEQDKETVR ________________ EQDKETVRVQGPGILP R S T V R V 1 1 1 2 0 3 7 0 0 0 3 1 0 0 0 4 2 0 1 4 0 0 30 1 3453.6271 Q9H813 Q9H813 7 36 TMEM206 Transmembrane protein 206 yes yes 3 7.6715E-08 87.532 By MS/MS By MS/MS 1 1 97018000 55245000 41773000 6161 2852 7026 15517;15518 14979;14980 14980 6012;6013;7857 2 STTNYVDFYSTK YSTQYGLKSTTNYVDF YVDFYSTKRPSYRAEQ K S T T K R 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 2 3 0 2 1 0 0 12 0 1424.646 Q99569;A0A0D9SF60 Q99569 1164 1175 PKP4 Plakophilin-4 yes no 2 0.00094051 110.08 By MS/MS By MS/MS 1 1 23973000 10947000 13026000 6162 2726 7027 15519;15520 14981;14982 14982 8442 2 STTPPPAEPVSLPQEPPK NLEELEEKSTTPPPAE SLPQEPPKAFSWASVT K S T P K A 1 0 0 0 0 1 2 0 0 0 1 1 0 0 7 2 2 0 0 1 0 0 18 0 1870.9676 Q9UN86 Q9UN86 225 242 G3BP2 Ras GTPase-activating protein-binding protein 2 yes yes 2 0.0013247 89.877 By MS/MS By MS/MS 1 2 67511000 34414000 33098000 6163 3059 7028 15521;15522;15523 14983;14984;14985 14984 6458;7913 3 STTSVSEEDVSSR RTVSGRYKSTTSVSEE SEEDVSSRYSRTDRSG K S T S R Y 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 5 2 0 0 2 0 0 13 0 1382.6161 Q96IZ0 Q96IZ0 228 240 PAWR PRKC apoptosis WT1 regulator protein yes yes 2 2.8747E-10 142.39 By MS/MS By MS/MS 2 2 41452000 19737000 21715000 6164 2669 7029 15524;15525;15526;15527 14986;14987;14988;14989 14989 5500;5501 4 STTTGHLIYK IGHVDSGKSTTTGHLI TTGHLIYKCGGIDKRT K S T Y K C 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 1 3 0 1 0 0 0 10 0 1119.5924 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A6PW80;Q5JR01 Q5VTE0 21 30 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha no no 2 0.018998 76.679 By MS/MS By matching 1 1 11330000 5250900 6078700 6165 1956 7030 15528;15529 14990 14990 1 STVEDFEANTSPTK GEESPGRKSTVEDFEA EANTSPTKRRGRPPLA K S T T K R 1 0 1 1 0 0 2 0 0 0 0 1 0 1 1 2 3 0 0 1 0 0 14 0 1524.6944 Q6P995 Q6P995 784 797 FAM171B Protein FAM171B yes yes 2 0.00085055 95.854 By MS/MS 1 3124500 0 3124500 6166 2325 7031 15530 14991 14991 4688 1 STVTGERQSGDGQESTEPVENK GEEKPDTKSTVTGERQ STEPVENKVGKKGPKH K S T N K V 0 1 1 1 0 2 4 3 0 0 0 1 0 0 1 3 3 0 0 2 0 0 22 1 2334.0571 O15234;J3KSY7 O15234 140 161 CASC3 Protein CASC3 yes no 2;3 8.7333E-13 143.52 By MS/MS By MS/MS 2 2 246090000 119990000 126110000 6167 1477 7032 15531;15532;15533;15534 14992;14993;14994 14993 2762 3 STWSQLSAVK VIHHKPLRSTWSQLSA WSQLSAVKRKGLSQTV R S T V K R 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 3 1 1 0 1 0 0 10 0 1105.5768 Q96DR7 Q96DR7 416 425 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 0.0034531 112.84 By MS/MS By MS/MS 2 3 25068000 12503000 12565000 6168 2637 7033;7034 15535;15536;15537;15538;15539 14995;14996;14997;14998;14999;15000 14999 5432;5433 6 STYTSYPK ________________ STYTSYPKAEPMPSAS K S T P K A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 2 2 0 2 0 0 0 8 0 945.44436 I3L1E3;O14964 I3L1E3 4 11 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 2 0.015375 99.375 By MS/MS By MS/MS 1 1 20489000 12512000 7976900 6169 1305 7035 15540;15541 15001;15002 15002 8162 2 SVAAEGALLPQTPPSPR ASPQSGRKSVAAEGAL PQTPPSPRNLIPHGHR K S V P R N 3 1 0 0 0 1 1 1 0 0 2 0 0 0 4 2 1 0 0 1 0 0 17 0 1689.905 Q86X27;H7C2H2 Q86X27 315 331 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes no 2 0.00033245 117.29 By MS/MS By MS/MS 2 2 32441000 18402000 14039000 6170 2415 7036;7037 15542;15543;15544;15545 15003;15004;15005 15003 4926;7702 3 SVASNQSEMEFSSLQDMPK KLEDSEVRSVASNQSE SSLQDMPKELDPSAVL R S V P K E 1 0 1 1 0 2 2 0 0 0 1 1 2 1 1 5 0 0 0 1 0 0 19 0 2113.9296 Q8N163;G3V119;H0YB24;A0A087X2B6 Q8N163 675 693 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 2;3 3.8812E-05 103.21 By MS/MS By MS/MS 7 6 175380000 84613000 90770000 6171 2457 7038;7039;7040;7041;7042 15546;15547;15548;15549;15550;15551;15552;15553;15554;15555;15556;15557;15558 15006;15007;15008;15009;15010;15011;15012;15013;15014;15015 15014 992;993 5020;5021;5022 10 SVATGPMTPQAAAPPAFPEVR SLGAAETRSVATGPMT PPAFPEVRVRPGSALA R S V V R V 5 1 0 0 0 1 1 1 0 0 0 0 1 1 5 1 2 0 0 2 0 0 21 0 2094.0568 Q7Z2K8 Q7Z2K8 870 890 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 2;3 4.1365E-05 103.35 By MS/MS By MS/MS 2 2 41751000 24063000 17688000 6172 2372 7043 15559;15560;15561;15562 15016;15017;15018;15019;15020 15016 954 7683 4 SVCPVTSGFSSPSPSAAAAAQEVR ________________ AAAAQEVRSATDGNTS K S V V R S 5 1 0 0 1 1 1 1 0 0 0 0 0 1 3 6 1 0 0 3 0 0 24 0 2362.1223 K4DI93 K4DI93 3 26 CUL4B yes yes 3 0.016541 44.385 By MS/MS 1 8619800 8619800 0 6173 1364 7044 15563 15021 15021 2532 1 SVDAIGGESMPIPTIDTSR TAEERKRKSVDAIGGE IPTIDTSRKKRLPSKE K S V S R K 1 1 0 2 0 0 1 2 0 3 0 0 1 0 2 3 2 0 0 1 0 0 19 0 1944.9463 Q9BWT3 Q9BWT3 684 702 PAPOLG Poly(A) polymerase gamma yes yes 2 0.00015024 100.27 By MS/MS 1 8647900 0 8647900 6174 2768 7045 15564 15022 15022 1102 5762 0 SVDALDDLTPPSTAESGSRSPTSNGGR RARRPRARSVDALDDL SPTSNGGRSRAYMPPR R S V G R S 2 2 1 3 0 0 1 3 0 0 2 0 0 0 3 6 3 0 0 1 0 0 27 1 2673.2478 S4R3V8;Q86X29 S4R3V8 445 471 LSR Lipolysis-stimulated lipoprotein receptor yes no 3 0.00017129 74.584 By MS/MS 1 8813100 8813100 0 6175 2416 7046 15565 15023;15024 15024 116 4929;4930 2 SVDAYDSYWESR PRVTKPSRSVDAYDSY YDSYWESRKPPLKASL R S V S R K 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 3 0 1 2 1 0 0 12 0 1476.6157 Q9UM82 Q9UM82 253 264 SPATA2 Spermatogenesis-associated protein 2 yes yes 2 2.6026E-14 159.5 By MS/MS By MS/MS 1 1 27592000 15182000 12411000 6176 3053 7047 15566;15567 15025;15026 15025 6439 2 SVDEVNYWDK SDDSSAYRSVDEVNYW DEVNYWDKQDHPISRL R S V D K Q 0 0 1 2 0 0 1 0 0 0 0 1 0 0 0 1 0 1 1 2 0 0 10 0 1253.5564 F5H5P2;P12694;F5GXU9 F5H5P2 381 390 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial yes no 2 0.0085059 77.124 By matching By MS/MS 1 1 10680000 5674300 5006200 6177 977 7048 15568;15569 15027 15027 1829 1 SVDEVNYWDKQDHPISR SDDSSAYRSVDEVNYW KQDHPISRLRHYLLSQ R S V S R L 0 1 1 3 0 1 1 0 1 1 0 1 0 0 1 2 0 1 1 2 0 0 17 1 2086.9708 F5H5P2;P12694 F5H5P2 381 397 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial yes no 3 8.7585E-05 114.46 By MS/MS By MS/MS 1 1 21339000 11070000 10269000 6178 977 7049 15570;15571 15028;15029 15029 1829 2 SVDGDQGLGMEGPYEVLK VDTMLTARSVDGDQGL EGPYEVLKDSSSQENM R S V L K D 0 0 0 2 0 1 2 4 0 0 2 1 1 0 1 1 0 0 1 2 0 0 18 0 1892.8826 Q9NWQ8 Q9NWQ8 150 167 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 1.9678E-143 240.46 By MS/MS By MS/MS 2 3 91205000 52333000 38872000 6179 2936 7050;7051 15572;15573;15574;15575;15576 15030;15031;15032 15031 1168 8478 3 SVDIHDSIQPR PLDTISQKSVDIHDSI IHDSIQPRSVDNRPQA K S V P R S 0 1 0 2 0 1 0 0 1 2 0 0 0 0 1 2 0 0 0 1 0 0 11 0 1265.6364 Q9Y6D6;E5RHL7;E5RIF2 Q9Y6D6 1569 1579 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes no 2 0.0026866 87.216 By matching By MS/MS 1 1 33303000 15409000 17894000 6180 3148 7052 15577;15578 15033 15033 6738 1 SVDVILDDDLVDK APAGQLPRSVDVILDD LDDDLVDKAKPGDRVQ R S V D K A 0 0 0 5 0 0 0 0 0 1 2 1 0 0 0 1 0 0 0 3 0 0 13 0 1444.7297 J3KQ69;P25205 J3KQ69 226 238 MCM3 DNA replication licensing factor MCM3 yes no 2 0.0048241 87.363 By MS/MS 1 2904300 2904300 0 6181 1328 7053 15579 15034 15034 1 SVEDDEEGHLICQSGDVLSAR SHRRKRTRSVEDDEEG SGDVLSARYEIVDTLG R S V A R Y 1 1 0 3 1 1 3 2 1 1 2 0 0 0 0 3 0 0 0 2 0 0 21 0 2315.0336 F8WBF5;P49759 F8WBF5 140 160 CLK1 Dual specificity protein kinase CLK1 yes no 3 0.00028312 78.645 By MS/MS By MS/MS 1 1 26821000 11374000 15447000 6182 1048 7054 15580;15581 15035;15036;15037;15038 15036 1984 4 SVEDEMDSPGEEPFYTGQGR TSSTKRLKSVEDEMDS PFYTGQGRSPGSGSQS K S V G R S 0 1 0 2 0 1 4 3 0 0 0 0 1 1 2 2 1 0 1 1 0 0 20 0 2228.9168 B1AKN5;B1AKN8;Q12857;S4R3W2;B1AKN7 B1AKN5 258 277 NFIA Nuclear factor 1;Nuclear factor 1 A-type yes no 2 4.1867E-05 115.56 By MS/MS By MS/MS 1 1 49820000 29869000 19951000 6183 522 7055 15582;15583 15039;15040 15040 206 979;980 2 SVEDVRPHHTDANNQSACFEAPDQK QVQKFLSRSVEDVRPH CFEAPDQKTLSAPQEE R S V Q K T 3 1 2 3 1 2 2 0 2 0 0 1 0 1 2 2 1 0 0 2 0 0 25 1 2851.258 E7EPN9;Q9Y520 E7EPN9 880 904 PRRC2C Protein PRRC2C yes no 3;4 0.0008943 63.573 By MS/MS By MS/MS 2 2 114440000 60384000 54051000 6184 802 7056 15584;15585;15586;15587 15041;15042;15043;15044;15045 15042 1433;7075 5 SVEEPTQPGGTGLSDSR SSLNFLNKSVEEPTQP GTGLSDSRTLSSSSMD K S V S R T 0 1 0 1 0 1 2 3 0 0 1 0 0 0 2 3 2 0 0 1 0 0 17 0 1715.7962 Q9H0B6 Q9H0B6 589 605 KLC2 Kinesin light chain 2 yes yes 2 0.0003073 100.69 By MS/MS By MS/MS 1 1 12261000 5195400 7066100 6185 2800 7057 15588;15589 15046;15047 15047 5848 2 SVELMSVYQYPEK GYLYMVVKSVELMSVY SVYQYPEKSQQAVLTP K S V E K S 0 0 0 0 0 1 2 0 0 0 1 1 1 0 1 2 0 0 2 2 0 0 13 0 1571.7541 G5E9V4;Q969F9 G5E9V4 195 207 HPS3 Hermansky-Pudlak syndrome 3 protein yes no 2 0.018053 52.725 By MS/MS 1 3545100 0 3545100 6186 1102 7058 15590 15048 15048 2084;2085;8145 0 SVENLPECGITHEQR ENRIRSTRSVENLPEC CGITHEQRAGSFSTVP R S V Q R A 0 1 1 0 1 1 3 1 1 1 1 0 0 0 1 1 1 0 0 1 0 0 15 0 1767.821 A0A0B4J1S8;Q9UBF8;F8W860 A0A0B4J1S8 440 454 PI4KB Phosphatidylinositol 4-kinase beta yes no 2;3 0.00057039 111.11 By MS/MS By MS/MS 2 2 301940000 187770000 114170000 6187 287 7059 15591;15592;15593;15594 15049;15050;15051;15052 15050 511 4 SVEPQDAGPLER VDEGPQPRSVEPQDAG QDAGPLERSQGDEAGG R S V E R S 1 1 0 1 0 1 2 1 0 0 1 0 0 0 2 1 0 0 0 1 0 0 12 0 1296.631 A0A0A0MRN5;Q9NZT2 A0A0A0MRN5 297 308 OGFR Opioid growth factor receptor yes no 2 0.0095993 74.537 By matching By MS/MS 1 1 14097000 7497300 6599800 6188 225 7060 15595;15596 15053 15053 400 1 SVESTSPEPSK YQMKSVLKSVESTSPE STSPEPSKIMLVEPPV K S V S K I 0 0 0 0 0 0 2 0 0 0 0 1 0 0 2 4 1 0 0 1 0 0 11 0 1146.5404 P18583 P18583 278 288 SON Protein SON yes yes 2 9.5257E-14 146.5 By MS/MS By MS/MS 3 4 33931000 19836000 14095000 6189 1725 7061 15597;15598;15599;15600;15601;15602;15603 15054;15055;15056;15057;15058;15059;15060 15060 3246;3247 7 SVESTSPEPSKIMLVEPPVAK YQMKSVLKSVESTSPE LVEPPVAKVLEPSETL K S V A K V 1 0 0 0 0 0 3 0 0 1 1 2 1 0 4 4 1 0 0 3 0 0 21 1 2224.1661 P18583 P18583 278 298 SON Protein SON yes yes 3 0.00041099 81.643 By MS/MS By MS/MS 1 1 72264000 41628000 30636000 6190 1725 7062 15604;15605 15061;15062 15061 644 3246;3247 2 SVEYEGDLK RLDTKEEKSVEYEGDL VEYEGDLKSGTAETEP K S V L K S 0 0 0 1 0 0 2 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 9 0 1038.487 Q12888;A6NNK5;C9JXV0;H7C3N7 Q12888 809 817 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.022542 64.439 By matching By MS/MS 1 1 10943000 4864900 6078600 6191 2031 7063 15606;15607 15063 15063 3972 1 SVFALTNGIYPHK PQLQGYLRSVFALTNG TNGIYPHKLVF_____ R S V H K L 1 0 1 0 0 0 0 1 1 1 1 1 0 1 1 1 1 0 1 1 0 0 13 0 1445.7667 Q02878 Q02878 273 285 RPL6 60S ribosomal protein L6 yes yes 3 0.026295 63.966 By MS/MS 1 0 0 0 6192 1988 7064 15608 15064 15064 1 SVFGTPTLETANK FTFHGPGKSVFGTPTL PTLETANKNHETDGGS K S V N K N 1 0 1 0 0 0 1 1 0 0 1 1 0 1 1 1 3 0 0 1 0 0 13 0 1363.6983 P49792 P49792 1140 1152 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.0049809 87.863 By MS/MS By MS/MS 1 1 18443000 7888200 10555000 6193 1860 7065 15609;15610 15065;15066 15066 7477 2 SVFMPRPQAVGSSNYASTSAGLK LSHSRMERSVFMPRPQ ASTSAGLKYPGSGADL R S V L K Y 3 1 1 0 0 1 0 2 0 0 1 1 1 1 2 5 1 0 1 2 0 0 23 1 2354.1689 Q15018 Q15018 328 350 FAM175B BRISC complex subunit Abro1 yes yes 3 0.0017249 67.56 By matching By MS/MS 1 1 18650000 9222100 9428000 6194 2116 7066 15611;15612 15067 15067 843 4183 1 SVGDGETVEFDVVEGEK NNPRKYLRSVGDGETV FDVVEGEKGAEAANVT R S V E K G 0 0 0 2 0 0 4 3 0 0 0 1 0 1 0 1 1 0 0 4 0 0 17 0 1794.816 H0Y449;P67809;A0A0D9SEI8;Q9Y2T7;P16989 H0Y449 152 168 YBX1;YBX3;YBX2 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 yes no 2 0.00032327 101.42 By MS/MS 1 1509300 0 1509300 6195 1117 7067 15613 15068 15068 2119 1 SVICDISPLR GGSLSERRSVICDISP ICDISPLRQIVRDPGA R S V L R Q 0 1 0 1 1 0 0 0 0 2 1 0 0 0 1 2 0 0 0 1 0 0 10 0 1158.6067 Q9UGU0 Q9UGU0 865 874 TCF20 Transcription factor 20 yes yes 2 0.0044432 84.718 By MS/MS By matching 1 1 9560400 6445500 3114900 6196 3001 7068 15614;15615 15069 15069 6315 1 SVKTSPTTQSK SNSSPIGKSVKTSPTT TSPTTQSKHNTTSAKG K S V S K H 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 3 3 0 0 1 0 0 11 1 1162.6194 Q5UIP0;H7C2B5 Q5UIP0 2239 2249 RIF1 Telomere-associated protein RIF1 yes no 2 0.027209 69.314 By MS/MS By matching 1 1 5467300 4888400 578840 6197 2261 7069 15616;15617 15070 15070 4529 1 SVLPTAIPAVLPAASPCSSPK NSPPSAQKSVLPTAIP ASPCSSPKTGLSARLS K S V P K T 4 0 0 0 1 0 0 0 0 1 2 1 0 0 5 4 1 0 0 2 0 0 21 0 2062.1133 O94806 O94806 13 33 PRKD3 Serine/threonine-protein kinase D3 yes yes 2 0.000232 109.37 By MS/MS 1 19101000 19101000 0 6198 1569 7070 15618 15071 15071 2973;2974 1 SVMKVESSENVPSPK SNTSPQLRSVMKVESS SENVPSPKHPPVVINA R S V P K H 0 0 1 0 0 0 2 0 0 0 0 2 1 0 2 4 0 0 0 3 0 0 15 1 1616.808 A0A1B0GTU1;A0A1B0GUI2 A0A1B0GTU1 137 151 yes no 2 0.017776 56.774 By MS/MS 1 3755100 3755100 0 6199 413 7071 15619 15072 15072 161 763 1 SVNEGAYIR YRSRLRQRSVNEGAYI VNEGAYIRLHKGMEKK R S V I R L 1 1 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 9 0 1007.5036 O95625 O95625 511 519 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes yes 2 0.0071481 82.831 By MS/MS 1 3810400 0 3810400 6200 1601 7072 15620 15073 15073 3036 1 SVNEILGLAESSPNEPK DLEKDIEKSVNEILGL ESSPNEPKAATLAVPP K S V P K A 1 0 2 0 0 0 3 1 0 1 2 1 0 0 2 3 0 0 0 1 0 0 17 0 1782.9 Q9H8G2 Q9H8G2 301 317 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 2;3 4.6386E-91 214.63 By MS/MS By MS/MS 2 2 103230000 51721000 51507000 6201 2854 7073 15621;15622;15623;15624 15074;15075;15076;15077;15078;15079 15074 6017;6018 6 SVNFSLTPNEIK EKTPLGERSVNFSLTP SLTPNEIKVSAEAEVA R S V I K V 0 0 2 0 0 0 1 0 0 1 1 1 0 1 1 2 1 0 0 1 0 0 12 0 1347.7034 P46821 P46821 1276 1287 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.00087962 114.21 By MS/MS By matching 1 1 25124000 14267000 10858000 6202 1840 7074 15625;15626 15080 15080 7454 1 SVNGGPGSPDLAR SPSMGRYRSVNGGPGS PGSPDLARHYKSSSPL R S V A R H 1 1 1 1 0 0 0 3 0 0 1 0 0 0 2 2 0 0 0 1 0 0 13 0 1225.6051 A0A087X2C4;H0YAH0;O60245 A0A087X2C4 297 309 PCDH7 Protocadherin-7 yes no 2 0.0040486 82.663 By MS/MS By MS/MS 2 2 59292000 31829000 27463000 6203 174 7075 15627;15628;15629;15630 15081;15082;15083 15081 7 286 2 SVPGTTSSPLVGDISPK SVSQDFSRSVPGTTSS LVGDISPKSSPHEVKF R S V P K S 0 0 0 1 0 0 0 2 0 1 1 1 0 0 3 4 2 0 0 2 0 0 17 0 1640.8621 H0Y6S1;Q9UQR0 H0Y6S1 92 108 SCML2 Sex comb on midleg-like protein 2 yes no 2 1.589E-05 125.23 By MS/MS By MS/MS 1 1 142680000 77499000 65180000 6204 1136 7076 15631;15632 15084;15085;15086;15087 15087 2162 4 SVPQIKNGSVVSLQSPGSR TGTTEESRSVPQIKNG SLQSPGSRSSSAGGTS R S V S R S 0 1 1 0 0 2 0 2 0 1 1 1 0 0 2 5 0 0 0 3 0 0 19 1 1939.0487 H0YLX2;Q2KHR2 H0YLX2 410 428 RFX7 DNA-binding protein RFX7 yes no 2 0.02528 55.588 By MS/MS 1 0 0 0 6205 1214 7077 15633 15088 15088 2262;2263;2264 1 SVPVNNLPERSPTDSPR ILREPTTKSVPVNNLP RSPTDSPREGLRVKRG K S V P R E 0 2 2 1 0 0 1 0 0 0 1 0 0 0 4 3 1 0 0 2 0 0 17 1 1863.9439 P49454 P49454 3165 3181 CENPF Centromere protein F yes yes 3 0.0005366 88.548 By MS/MS By MS/MS 1 1 28780000 14021000 14760000 6206 1854 7078 15634;15635 15089;15090 15089 3568;3569;7466 2 SVQEGENPDDGVR MSKRKRKRSVQEGENP ENPDDGVRGSPPEDYR R S V V R G 0 1 1 2 0 1 2 2 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 0 1400.6168 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 17 29 RBM34 RNA-binding protein 34 yes no 2 0.0053586 79.885 By MS/MS By MS/MS 1 1 85743000 42604000 43138000 6207 449 7079 15636;15637 15091;15092;15093 15091 840 3 SVQEGENPDDGVRGSPPEDYR MSKRKRKRSVQEGENP GSPPEDYRLGQVASSL R S V Y R L 0 2 1 3 0 1 3 3 0 0 0 0 0 0 3 2 0 0 1 2 0 0 21 1 2302.0098 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 17 37 RBM34 RNA-binding protein 34 yes no 3 0.0010463 69.737 By MS/MS By MS/MS 1 1 60711000 27903000 32808000 6208 449 7080 15638;15639 15094;15095;15096 15094 840;841 3 SVSADEVNSPLSPLTWQPLENQK KQTVECEKSVSADEVN WQPLENQKDQIDEQPW K S V Q K D 1 0 2 1 0 2 2 0 0 0 3 1 0 0 3 4 1 1 0 2 0 0 23 0 2538.2602 Q5VUJ6 Q5VUJ6 510 532 LRCH2 Leucine-rich repeat and calponin homology domain-containing protein 2 yes yes 2;3 7.1707E-37 172.09 By MS/MS 2 19621000 0 19621000 6209 2270 7081 15640;15641 15097;15098 15097 4561 2 SVSCPRSISAQSPSSGDTR QQPSSIRRSVSCPRSI SPSSGDTRPFSAQQMI R S V T R P 1 2 0 1 1 1 0 1 0 1 0 0 0 0 2 7 1 0 0 1 0 0 19 1 1977.9174 F2Z2J7;F2Z2X2;Q6ZT98 F2Z2J7 286 304 TTLL7 Tubulin polyglutamylase TTLL7 yes no 2 0.018234 58.754 By MS/MS By matching 1 1 43257000 17720000 25537000 6210 931 7082 15642;15643 15099 15099 1745;1746 0 SVSDQFYR ________________ SVSDQFYRYKMPRLIA R S V Y R Y 0 1 0 1 0 1 0 0 0 0 0 0 0 1 0 2 0 0 1 1 0 0 8 0 1000.4614 P55010;H0YK29;H0YK11;H0YMJ8;H0YM54;H0YLZ1;H0YN40 P55010 8 15 EIF5 Eukaryotic translation initiation factor 5 yes no 2 0.011363 86.898 By MS/MS By MS/MS 1 1 16897000 8939500 7957200 6211 1905 7083 15644;15645 15100;15101;15102 15102 3684 3 SVSEINSDDELSGK SVQSLDSRSVSEINSD SDDELSGKGYALVPII R S V G K G 0 0 1 2 0 0 2 1 0 1 1 1 0 0 0 4 0 0 0 1 0 0 14 0 1478.6736 F8WF45;P82094 F8WF45 338 351 TMF1 TATA element modulatory factor yes no 2 9.2577E-43 187.56 By MS/MS By MS/MS 1 1 282520000 125700000 156810000 6212 1058 7084 15646;15647 15103;15104 15104 2004 2 SVSENSLVAMDFSGQTGR SPFSTPVRSVSENSLV DFSGQTGRVIENPAEA R S V G R V 1 1 1 1 0 1 1 2 0 0 1 0 1 1 0 4 1 0 0 2 0 0 18 0 1883.8683 Q13322 Q13322 426 443 GRB10 Growth factor receptor-bound protein 10 yes yes 2 0.0001158 104.16 By MS/MS By MS/MS 1 2 15185000 5180100 10005000 6213 2056 7085 15648;15649;15650 15105;15106;15107 15107 820 4047;4048 3 SVSGFLHFDTATK GGIEDENRSVSGFLHF LHFDTATKVRRKILNI R S V T K V 1 0 0 1 0 0 0 1 1 0 1 1 0 2 0 2 2 0 0 1 0 0 13 0 1408.6987 Q92621 Q92621 1165 1177 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.0013224 92.457 By MS/MS By matching 1 1 6615600 4008500 2607100 6214 2590 7086 15651;15652 15108 15108 5322 1 SVSGSPEPAAK VRRVSSSRSVSGSPEP GSPEPAAKKPPAPPSP R S V A K K 2 0 0 0 0 0 1 1 0 0 0 1 0 0 2 3 0 0 0 1 0 0 11 0 1028.5138 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 761 771 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0046013 85.973 By MS/MS By MS/MS 2 2 12325000 5940400 6384700 6215 511 7087;7088 15653;15654;15655;15656 15109;15110;15111 15111 962;963 2 SVSGSPESDELQELR PFLSSARRSVSGSPES SDELQELRTRSAKKRR R S V L R T 0 1 0 1 0 1 3 1 0 0 2 0 0 0 1 4 0 0 0 1 0 0 15 0 1631.7639 Q7Z2Z1 Q7Z2Z1 834 848 TICRR Treslin yes yes 2 6.8429E-06 125.39 By MS/MS By MS/MS 2 2 34459000 15838000 18621000 6216 2373 7089;7090 15657;15658;15659;15660 15112;15113;15114;15115 15112 4815;4816;4817 4 SVSPCSNVESR RTTPRRSRSVSPCSNV PCSNVESRLLPRYSHS R S V S R L 0 1 1 0 1 0 1 0 0 0 0 0 0 0 1 4 0 0 0 2 0 0 11 0 1220.5455 Q9UQ35;I3L4D8;I3L182 Q9UQ35 952 962 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0012243 99.669 By MS/MS By MS/MS 1 1 323400000 168960000 154440000 6217 3074 7091 15661;15662 15116;15117;15118 15118 6559;6560 3 SVSPPPKR PVPPSKARSVSPPPKR SVSPPPKRATSRSRSR R S V K R A 0 1 0 0 0 0 0 0 0 0 0 1 0 0 3 2 0 0 0 1 0 0 8 1 866.4974 Q13247 Q13247 314 321 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 2 0.029554 82.831 By MS/MS 1 96675000 96675000 0 6218 2053 7092 15663 15119 15119 1 SVSPQNSDSSGFADVNGWHLR KEPKPLEKSVSPQNSD DVNGWHLRFRWSKDAP K S V L R F 1 1 2 2 0 1 0 2 1 0 1 0 0 1 1 5 0 1 0 2 0 0 21 0 2259.0305 S4R3E2;Q9UKB3 S4R3E2 188 208 DNAJC12 DnaJ homolog subfamily C member 12 yes no 3 0.0025819 64.26 By MS/MS By MS/MS 1 1 11901000 5157400 6743600 6219 3022 7093 15664;15665 15120;15121;15122 15121 141 6370 3 SVSPSPSVLSEGR AGGGGAARSVSPSPSV PSVLSEGRDEPQRQLD R S V G R D 0 1 0 0 0 0 1 1 0 0 1 0 0 0 2 5 0 0 0 2 0 0 13 0 1300.6623 C9IYE1;A0A087X1P3;Q86UW7 C9IYE1 56 68 CADPS2 Calcium-dependent secretion activator 2 yes no 2 0.016121 68.033 By matching By MS/MS 1 1 8941600 4086600 4855000 6220 169 7094 15666;15667 15123 15123 274 1 SVSPTFLNPSDENLK CLNVQSQRSVSPTFLN NPSDENLKTLCNFAGD R S V L K T 0 0 2 1 0 0 1 0 0 0 2 1 0 1 2 3 1 0 0 1 0 0 15 0 1646.8152 Q9UKA4 Q9UKA4 1240 1254 AKAP11 A-kinase anchor protein 11 yes yes 2 0.0022113 86.548 By MS/MS By matching 1 1 82634000 49740000 32894000 6221 3021 7095 15668;15669 15124 15124 6369 1 SVSQERLEDSVLMK QSVQIRQRSVSQERLE LEDSVLMKYCPRSASQ R S V M K Y 0 1 0 1 0 1 2 0 0 0 2 1 1 0 0 3 0 0 0 2 0 0 14 1 1619.8189 Q5T5U3;E7ESW5;F8W9U9;A0A1B0GV73;A0A087WW76 Q5T5U3 456 469 ARHGAP21 Rho GTPase-activating protein 21 yes no 2 0.025641 65.652 By MS/MS 1 13918000 13918000 0 6222 2241 7096 15670 15125 15125 896 4495 1 SVSSENPTYPSAPLKPVTVPPR PRPLLLKKSVSSENPT KPVTVPPRLAGASQAK K S V P R L 1 1 1 0 0 0 1 0 0 0 1 1 0 0 6 4 2 0 1 3 0 0 22 1 2322.222 A0A0U1RQE4;A0A0U1RQN2;Q5HYK7 A0A0U1RQE4 428 449 SH3D19 SH3 domain-containing protein 19 yes no 3 0.0021666 63.701 By MS/MS By matching 1 1 15083000 8192200 6891200 6223 379 7097 15671;15672 15126 15126 699 1 SVSSFPVPQDNVDTHPGSGK ISRAATRRSVSSFPVP DTHPGSGKEVRVPATA R S V G K E 0 0 1 2 0 1 0 2 1 0 0 1 0 1 3 4 1 0 0 3 0 0 20 0 2053.9705 C9JAY7;E7EVC7;Q676U5 C9JAY7 124 143 ATG16L1 Autophagy-related protein 16-1 yes no 2;3 2.5184E-16 149.95 By MS/MS By MS/MS 2 2 140770000 72442000 68333000 6224 654 7098 15673;15674;15675;15676 15127;15128;15129;15130;15131 15128 1217;1218 5 SVSSNVASVSPIPAGSK GSPRTPNRSVSSNVAS SPIPAGSKKIDPNMKA R S V S K K 2 0 1 0 0 0 0 1 0 1 0 1 0 0 2 6 0 0 0 3 0 0 17 0 1585.8312 E9PHI6;Q9Y6G9 E9PHI6 296 312 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2;3 5.059E-106 221.81 By MS/MS By MS/MS 3 4 154520000 86110000 68407000 6225 878 7099 15677;15678;15679;15680;15681;15682;15683 15132;15133;15134;15135;15136;15137 15136 1627;1628;1629 6 SVSSSPWLPQDGFDPSDYAEPMDAVVKPR GHRDGQRKSVSSSPWL MDAVVKPRNEEENIYS K S V P R N 2 1 0 4 0 1 1 1 0 0 1 1 1 1 5 5 0 1 1 3 0 0 29 1 3176.4761 Q9NRY4 Q9NRY4 1070 1098 ARHGAP35 Rho GTPase-activating protein 35 yes yes 3 0.021346 46.276 By matching By MS/MS 1 1 36567000 17684000 18882000 6226 2911 7100 15684;15685 15138;15139 15139 1155 6138 2 SVSSYGNIR SPCTPRLRSVSSYGNI VSSYGNIRAVATARSL R S V I R A 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 3 0 0 1 1 0 0 9 0 981.48796 Q8N122 Q8N122 719 727 RPTOR Regulatory-associated protein of mTOR yes yes 2 0.0045417 101.66 By MS/MS By matching 1 1 58656000 29396000 29260000 6227 2456 7101 15686;15687 15140 15140 5016 1 SVSTPSEAGSQDSGDGAVGSR PPMSPSSKSVSTPSEA GDGAVGSRTLHW____ K S V S R T 2 1 0 2 0 1 1 4 0 0 0 0 0 0 1 6 1 0 0 2 0 0 21 0 1949.8563 E9PGG1;E7ETL8;E7EQU2;E7EV09;E7EQL5;E7EUM4;E7ERR6;E7ERH4;E7ET01;E7ESD3;E7EMU4;Q13409 E9PGG1 86 106 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 2 0.0012921 77.899 By matching By MS/MS 1 1 21958000 13392000 8566100 6228 807 7102 15688;15689 15141 15141 1441;7079 1 SVSTRSPHQLLSPSSFSPSATPSQK PETPLTKRSVSTRSPH PSATPSQKYNSRSNRG R S V Q K Y 1 1 0 0 0 2 0 0 1 0 2 1 0 1 4 9 2 0 0 1 0 0 25 1 2612.3194 E9PIQ6;Q14181 E9PIQ6 96 120 POLA2 DNA polymerase alpha subunit B yes no 3 0.027861 41.423 By matching By MS/MS 1 1 16432000 10601000 5831100 6229 885 7103 15690;15691 15142 15142 1641;1642;1643;1644;1645 1 SVSTTNIAGHFNDESPLGLR RSSLSLAKSVSTTNIA DESPLGLRRILSQSTD K S V L R R 1 1 2 1 0 0 1 2 1 1 2 0 0 1 1 3 2 0 0 1 0 0 20 0 2114.0392 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 194 213 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2;3 0.00031833 84.895 By MS/MS By MS/MS 2 2 65925000 35521000 30404000 6230 2613 7104 15692;15693;15694;15695 15143;15144;15145 15143 7770 3 SVSVDESRPELIFR QKTSLPSRSVSVDESR SRPELIFRLAVGTFSI R S V F R L 0 2 0 1 0 0 2 0 0 1 1 0 0 1 1 3 0 0 0 2 0 0 14 1 1632.8471 Q96BY7 Q96BY7 495 508 ATG2B Autophagy-related protein 2 homolog B yes yes 2;3 0.0015921 100.11 By matching By MS/MS 2 2 110840000 51082000 59757000 6231 2628 7105 15696;15697;15698;15699 15146;15147 15147 5405 2 SVSVDIR PLSTNLYRSVSVDIRR RSVSVDIRRTPEEEFS R S V I R R 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 2 0 0 7 0 774.42357 Q6UB99 Q6UB99 1790 1796 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 2 0.03183 70.816 By MS/MS By matching 1 1 10411000 5516300 4894800 6232 2337 7106 15700;15701 15148 15148 1 SVSVVTGSEQK ATTKPIVRSVSVVTGS VVTGSEQKRKVLEATG R S V Q K R 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 3 1 0 0 3 0 0 11 0 1119.5772 Q9UPN4;I3L2J8 Q9UPN4 45 55 CEP131 Centrosomal protein of 131 kDa yes no 2 0.011404 72.705 By MS/MS By MS/MS 1 1 31282000 18451000 12831000 6233 3064 7107 15702;15703 15149;15150 15150 6475 2 SVTDYAQQNPAAQIPAR ETEQRAPKSVTDYAQQ PAAQIPARQREIEMNR K S V A R Q 4 1 1 1 0 3 0 0 0 1 0 0 0 0 2 1 1 0 1 1 0 0 17 0 1828.9068 A0A0A0MRM8 A0A0A0MRM8 1110 1126 MYO6 yes yes 2;3 6.7504E-54 190.85 By MS/MS By MS/MS 2 3 95268000 44988000 50280000 6234 221 7108 15704;15705;15706;15707;15708 15151;15152;15153;15154;15155 15154 6893;8011 5 SVTEQGAELSNEER DDMAACMKSVTEQGAE AELSNEERNLLSVAYK K S V E R N 1 1 1 0 0 1 4 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 14 0 1547.7063 E7EX29;P63104;E7ESK7;E5RGE1;E5RIR4;E9PD24;E7EVZ2 E7EX29 28 41 YWHAZ 14-3-3 protein zeta/delta yes no 2 1.1941E-94 219.92 By MS/MS By MS/MS 1 1 37718000 15828000 21890000 6235 838 7109 15709;15710 15156;15157 15156 2 SVTSNQSDGTQESCESPDVLDR SGESPFSRSVTSNQSD ESPDVLDRHQTMEVSC R S V D R H 0 1 1 3 1 2 2 1 0 0 1 0 0 0 1 5 2 0 0 2 0 0 22 0 2410.019 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 251 272 NDRG3 Protein NDRG3 yes no 2;3 0.00012952 93.754 By MS/MS By MS/MS 2 2 68933000 36876000 32057000 6236 1049 7110 15711;15712;15713;15714 15158;15159;15160;15161;15162 15158 1987;1988 5 SVVESDQEEPPGLEAAEAPGPQPPQPLQR GPQRFLRRSVVESDQE QPPQPLQRRVLLLCKT R S V Q R R 3 1 0 1 0 4 5 2 0 0 2 0 0 0 7 2 0 0 0 2 0 0 29 0 3051.4785 F8W9F9;H0Y7T5;Q9Y3S1;A6PVV2 F8W9F9 45 73 WNK2 Serine/threonine-protein kinase WNK2 yes no 3 0.0075626 48.579 By matching By MS/MS 1 1 12534000 5649600 6884700 6237 1040 7111 15715;15716 15163 15163 1965 1 SVVGTPAYLAPEVLLNQGYNR IGEKSFRRSVVGTPAY LLNQGYNRSLDMWSVG R S V N R S 2 1 2 0 0 1 1 2 0 0 3 0 0 0 2 1 1 0 2 3 0 0 21 0 2260.1852 B4DTS2;Q9BZL6 B4DTS2 710 730 PRKD2 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2 yes no 2;3 1.02E-46 178.22 By MS/MS By MS/MS 2 2 122640000 79043000 43592000 6238 564 7112 15717;15718;15719;15720 15164;15165;15166;15167 15164 1045 4 SVVGTPAYLAPEVLR IGEKSFRRSVVGTPAY YLAPEVLRNKGYNRSL R S V L R N 2 1 0 0 0 0 1 1 0 0 2 0 0 0 2 1 1 0 1 3 0 0 15 0 1570.8719 O94806;H0Y5M6;Q15139;F8WBA3 Q15139 742 756 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase no no 2;3 4.8516E-11 137.91 By MS/MS By MS/MS 2 2 243010000 137520000 105490000 6239 2129;1569 7113 15721;15722;15723;15724 15168;15169;15170;15171;15172;15173 15170 2975 6 SVVSDLEADDVK NKELKPQKSVVSDLEA DLEADDVKGSVPLSSS K S V V K G 1 0 0 3 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 12 0 1275.6194 P11388 P11388 1374 1385 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.00054369 109.99 By MS/MS By MS/MS 3 3 260760000 140100000 120660000 6240 1682 7114;7115 15725;15726;15727;15728;15729;15730 15174;15175;15176;15177;15178 15176 3169;3170 5 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK NKELKPQKSVVSDLEA EITNPVPKKNVTVKKT K S V P K K 2 0 1 4 0 0 3 1 1 1 2 2 0 1 6 6 3 0 0 5 0 0 38 1 3960.948 P11388 P11388 1374 1411 TOP2A DNA topoisomerase 2-alpha yes yes 4 0.0098194 40.166 By MS/MS By matching 1 1 47448000 21449000 25998000 6241 1682 7116 15731;15732 15179 15179 3169;3170;3171;3172;3173 1 SVVSFDKVKEPR KSASREKRSVVSFDKV FDKVKEPRKSRDSESH R S V P R K 0 1 0 1 0 0 1 0 0 0 0 2 0 1 1 2 0 0 0 3 0 0 12 2 1389.7616 Q15424 Q15424 601 612 SAFB Scaffold attachment factor B1 yes yes 3 0.027511 62.035 By matching By MS/MS 1 1 62277000 41842000 20435000 6242 2139 7117 15733;15734 15180 15180 4244 1 SVWGSLAVQNSPK MLDAATGKSVWGSLAV LAVQNSPKGCHRDKRT K S V P K G 1 0 1 0 0 1 0 1 0 0 1 1 0 0 1 3 0 1 0 2 0 0 13 0 1371.7147 P18615 P18615 343 355 NELFE Negative elongation factor E yes yes 2 1.5534E-06 125.84 By MS/MS By MS/MS 1 1 4871100 0 4871100 6243 1726 7118 15735;15736 15181;15182;15183 15183 3254;3255 3 SVYATMGDHENRSPVKEPVEQPR RTRRRNVRSVYATMGD KEPVEQPRVTRKRLER R S V P R V 1 2 1 1 0 1 3 1 1 0 0 1 1 0 3 2 1 0 1 3 0 0 23 2 2625.2605 Q96T58 Q96T58 1906 1928 SPEN Msx2-interacting protein yes yes 4 0.021088 46.982 By MS/MS By matching 1 1 21573000 12511000 9062000 6244 2716 7119 15737;15738 15184 15184 5637 1 SVYFGDSCQDVLSMLGSPHK AKMRVFERSVYFGDSC SMLGSPHKVFYKSEDK R S V H K V 0 0 0 2 1 1 0 2 1 0 2 1 1 1 1 4 0 0 1 2 0 0 20 0 2226.0085 H3BSG0;Q9BSU1 H3BSG0 238 257 C16orf70 UPF0183 protein C16orf70 yes no 3 0.030503 40.104 By MS/MS 1 0 0 0 6245 1250 7120 15739 15185 15185 450 1 SWASLFHDSKPSSSSPVAYVETKYSPPAISPLVSEK TLPVSQPKSWASLFHD ISPLVSEKQVEVKEGL K S W E K Q 3 0 0 1 0 0 2 0 1 1 2 3 0 1 5 10 1 1 2 3 0 0 36 2 3877.9414 Q14694 Q14694 341 376 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 4 0.0016488 54.647 By matching By MS/MS 1 1 27011000 16450000 10561000 6246 2106 7121 15740;15741 15186 15186 4166;4167;7585 1 SWDSSSPVDRPEPEAASPTTR GPIVSRTRSWDSSSPV EAASPTTRTRPVTRSM R S W T R T 2 2 0 2 0 0 2 0 0 0 0 0 0 0 4 5 2 1 0 1 0 0 21 1 2271.0404 C9J0I9;Q86WB0 C9J0I9 311 331 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 5.2391E-05 108.75 By MS/MS By MS/MS 2 2 218230000 125990000 92241000 6247 624 7122;7123 15742;15743;15744;15745 15187;15188;15189 15187 1161;1162;1163;1164;1165 3 SWGQQAQEYQEQK FSQEVSRRSWGQQAQE AQEYQEQKQRSSSKDG R S W Q K Q 1 0 0 0 0 5 2 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 13 0 1608.7168 Q5VZK9 Q5VZK9 1331 1343 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 2 1.9484E-14 155.43 By MS/MS By MS/MS 1 1 23896000 12959000 10937000 6248 2282 7124 15746;15747 15190;15191 15191 4589 2 SWLSPRVSPPASPGP PGNPSRARSWLSPRVS SPPASPGP________ R S W G P - 1 1 0 0 0 0 0 1 0 0 1 0 0 0 5 4 0 1 0 1 0 0 15 1 1533.794 A0A0C4DGU2;Q9Y4U1 A0A0C4DGU2 211 225 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes no 2 0.0088602 95.197 By MS/MS By MS/MS 1 1 17291000 8633700 8657300 6249 328 7125 15748;15749 15192;15193 15192 578;579 2 SWSASDPFYTNDR CSPTHISRSWSASDPF DPFYTNDRSILTLSTM R S W D R S 1 1 1 2 0 0 0 0 0 0 0 0 0 1 1 3 1 1 1 0 0 0 13 0 1544.6532 Q9Y2G3 Q9Y2G3 1152 1164 ATP11B Probable phospholipid-transporting ATPase IF yes yes 2 9.4198E-05 123.02 By MS/MS By MS/MS 1 1 19112000 10192000 8920500 6250 3091 7126 15750;15751 15194;15195;15196 15194 6636 3 SWSPPPEVSR AGAGGRARSWSPPPEV SPPPEVSRSAHVPSLQ R S W S R S 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 3 0 1 0 1 0 0 10 0 1140.5564 F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31;Q9NR19 F8WCJ4 28 37 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic yes no 2 0.023953 61.48 By matching By MS/MS 1 1 61913000 34038000 27876000 6251 546 7127 15752;15753 15197 15197 1022 1 SYDVPPPPMEPDHPFYSNISK AQVKIWRRSYDVPPPP PFYSNISKDRRYADLT R S Y S K D 0 0 1 2 0 0 1 0 1 1 0 1 1 1 6 3 0 0 2 1 0 0 21 0 2416.1045 P18669;Q8N0Y7 P18669 118 138 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 yes no 3 0.00046736 75.539 By MS/MS By MS/MS 2 2 95338000 51170000 44168000 6252 1728 7128;7129 15754;15755;15756;15757 15198;15199;15200;15201;15202;15203 15198 646 3259 6 SYEDMIGEEVPSDQYYWAPLAQHER SDPRRRLRSYEDMIGE APLAQHERGSLASLDS R S Y E R G 2 1 0 2 0 2 4 1 1 1 1 0 1 0 2 2 0 1 3 1 0 0 25 0 3012.3236 C9JZR2;O60716 C9JZR2 320 344 CTNND1 Catenin delta-1 yes no 3 2.5987E-06 105.92 By MS/MS By MS/MS 2 3 75404000 38623000 36781000 6253 706 7130;7131 15758;15759;15760;15761;15762 15204;15205;15206;15207;15208;15209 15204 272 1308;8108;8109 6 SYELPDGQVITIGNER ASSSSLEKSYELPDGQ VITIGNERFRCPEALF K S Y E R F 0 1 1 1 0 1 2 2 0 2 1 0 0 0 1 1 1 0 1 1 0 0 16 0 1789.8846 P63261;P60709;Q6S8J3;A5A3E0;Q9BYX7;Q562R1;P68133;P68032;P63267;P62736 P63261 239 254 ACTG1;ACTB;POTEE;POTEF;POTEKP;ACTBL2;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle no no 2 0.00071409 98 By MS/MS By MS/MS 1 1 135970000 52183000 83784000 6254 1928;1955 7132 15763;15764 15210;15211 15211 2 SYENQAETK NARQKARKSYENQAET YENQAETKDNEKRELT K S Y T K D 1 0 1 0 0 1 2 0 0 0 0 1 0 0 0 1 1 0 1 0 0 0 9 0 1068.4724 E7EVZ1;Q86UP3 E7EVZ1 2258 2266 ZFHX4 Zinc finger homeobox protein 4 yes no 2 0.029134 58.981 By MS/MS 1 0 0 0 6255 831 7133 15765 15212 15212 1 SYIVMSPESPVK RESRRKRKSYIVMSPE MSPESPVKCGTQTSSP K S Y V K C 0 0 0 0 0 0 1 0 0 1 0 1 1 0 2 3 0 0 1 2 0 0 12 0 1335.6744 A0A087WV65;H0YCZ0;H7BY22;H0YEM9;Q8NCP5 A0A087WV65 98 109 ZBTB44 Zinc finger and BTB domain-containing protein 44 yes no 2 0.021636 51.436 By MS/MS By matching 1 1 8963500 4301400 4662100 6256 70 7134 15766;15767 15213 15213 27 128;129 1 SYLEGSSDNQLK SSQSKGNKSYLEGSSD GSSDNQLKDSESTPVD K S Y L K D 0 0 1 1 0 1 1 1 0 0 2 1 0 0 0 3 0 0 1 0 0 0 12 0 1339.6256 E9PJ60;Q9UHI6 E9PJ60 280 291 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 5.5285E-10 120.55 By MS/MS By matching 2 2 40856000 22327000 18529000 6257 887 7135;7136 15768;15769;15770;15771 15214;15215 15215 1647;1648;1649 1 SYLPYPAPEGIAVSPLSLHGK SPPIPYPRSYLPYPAP SPLSLHGKGPVYPHPV R S Y G K G 2 0 0 0 0 0 1 2 1 1 3 1 0 0 4 3 0 0 2 1 0 0 21 0 2195.1627 Q6W2J9;H7BYY2;A1A564 Q6W2J9 656 676 BCOR BCL-6 corepressor yes no 3 5.1572E-05 104.03 By MS/MS By MS/MS 1 1 16354000 9835700 6518000 6258 2343 7137 15772;15773 15216;15217;15218 15217 4744 3 SYNEYHVNNTVKDLDQMHRTILMR S Y M R 0 2 3 2 0 1 1 0 2 1 2 1 2 0 0 1 2 0 2 2 0 0 24 2 2976.4334 REV__G3V1Q4 yes no 3 0.011096 45.784 By MS/MS 1 11342000 0 11342000 + 6259 3175 7138 15774 15219 15219 6769;8516 1 SYPLDLEGGSEYK LSSYDSDRSYPLDLEG LEGGSEYKYTPPTQPP R S Y Y K Y 0 0 0 1 0 0 2 2 0 0 2 1 0 0 1 2 0 0 2 0 0 0 13 0 1456.6722 B7Z4K4;Q9UET6 B7Z4K4 112 124 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase yes no 2 0.0013694 105.17 By MS/MS By MS/MS 1 1 15700000 9651700 6048300 6260 589 7139 15775;15776 15220;15221;15222 15222 1074;8084 3 SYQNSPSSDDGIRPLPEYSTEK SGSSIAEKSYQNSPSS LPEYSTEKHKKHKKEK K S Y E K H 0 1 1 2 0 1 2 1 0 1 1 1 0 0 3 5 1 0 2 0 0 0 22 1 2469.1296 Q15648 Q15648 1475 1496 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 3 0.011849 50.14 By MS/MS By matching 1 1 58406000 30380000 28027000 6261 2148 7140 15777;15778 15223 15223 4266;4267 1 SYQPNENKFRGFMQK NYNTGVYRSYQPNENK KFRGFMQKFGNFIHKN R S Y Q K F 0 1 2 0 0 2 1 1 0 0 0 2 1 2 1 1 0 0 1 0 0 0 15 2 1872.8941 Q5T0W9 Q5T0W9 988 1002 FAM83B Protein FAM83B yes yes 2 0.031198 42.243 By MS/MS 1 0 0 0 6262 2235 7141 15779 15224 15224 892 1 SYSAGNASQLEQLSR NVCGVRKRSYSAGNAS SQLEQLSRARRSGGEL R S Y S R A 2 1 1 0 0 2 1 1 0 0 2 0 0 0 0 4 0 0 1 0 0 0 15 0 1609.7696 Q14678 Q14678 323 337 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 2 1.6072E-11 143.88 By MS/MS By MS/MS 1 1 42543000 19085000 23457000 6263 2100 7142 15780;15781 15225;15226 15226 4152 2 SYSHDVLPK SSLYNLPRSYSHDVLP YSHDVLPKVSPSSTEA R S Y P K V 0 0 0 1 0 0 0 0 1 0 1 1 0 0 1 2 0 0 1 1 0 0 9 0 1044.524 B7Z3B9;Q13480 B7Z3B9 161 169 GAB1 GRB2-associated-binding protein 1 yes no 2 0.0096958 78.513 By matching By MS/MS 1 1 31091000 16840000 14251000 6264 588 7143 15782;15783 15227 15227 1073 1 SYSPAHNR LSSRSRSRSYSPAHNR SYSPAHNRERNHPRVY R S Y N R E 1 1 1 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 1 0 0 0 8 0 930.43078 Q9Y2W1 Q9Y2W1 53 60 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.027276 53.597 By matching By MS/MS 1 1 5920700 2411800 3508900 6265 3096 7144 15784;15785 15228 15228 6652 0 SYSPDGKESPSDKK KKDKSRKRSYSPDGKE KESPSDKKSKTDGSQK R S Y K K S 0 0 0 2 0 0 1 1 0 0 0 3 0 0 2 4 0 0 1 0 0 0 14 2 1523.7104 A8MXP9;D6REM6;A0A0R4J2E8;P43243;B3KM87 A8MXP9 596 609 MATR3 Matrin-3 yes no 2 0.0050167 87.647 By matching By MS/MS 1 2 22233000 7289000 14944000 6266 503 7145 15786;15787;15788 15229;15230;15231 15231 920;921 2 SYSSPDITQAIQEEEKR REPSKLKRSYSSPDIT AIQEEEKRKPTVTPTV R S Y K R K 1 1 0 1 0 2 3 0 0 2 0 1 0 0 1 3 1 0 1 0 0 0 17 1 1979.9436 P40818 P40818 716 732 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 2;3 1.9347E-15 146.88 By MS/MS By MS/MS 2 2 116270000 76811000 39459000 6267 1813 7146 15789;15790;15791;15792 15232;15233;15234;15235 15233 3421 4 SYTLVVAK PPWLKKQKSYTLVVAK SYTLVVAKDGGDKKEP K S Y A K D 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 8 0 879.50657 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 87 94 EPB41L2 Band 4.1-like protein 2 yes no 1;2 0.009011 104.42 By MS/MS By MS/MS 2 2 507290000 279730000 227560000 6268 1502 7147 15793;15794;15795;15796 15236;15237;15238;15239 15238 2810;7316 4 SYTPEYR HRRRSRSRSYTPEYRR RSYTPEYRRRRSRSHS R S Y Y R R 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 2 0 0 0 7 0 914.4134 Q13595 Q13595 86 92 TRA2A Transformer-2 protein homolog alpha yes yes 1 0.030029 41.302 By matching By MS/MS 1 1 16309000 8529200 7779400 6269 2069 7148 15797;15798 15240 15240 4085;8332 1 SYTSTQTSSK DDNESYYKSYTSTQTS TSTQTSSKSFLKSYDS K S Y S K S 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 4 3 0 1 0 0 0 10 0 1088.4986 H0Y876;H7C4R2;Q96JN2 H0Y876 366 375 CCDC136 Coiled-coil domain-containing protein 136 yes no 2 0.026634 44.426 By MS/MS 1 0 0 0 6270 1146 7149 15799 15241 15241 2176;2177;2178;2179 1 TAADELEAFLGGGAPGGRHPGGGDYEEL RPPRSRERTAADELEA GGGDYEEL________ R T A E L - 4 1 0 2 0 0 4 8 1 0 3 0 0 1 2 0 1 0 1 0 0 0 28 1 2742.2522 H0Y4Z8;Q3YEC7 H0Y4Z8 703 730 RABL6 Rab-like protein 6 yes no 3 1.163E-10 120.64 By MS/MS By MS/MS 1 1 51801000 28530000 23271000 6271 1124 7150 15800;15801 15242;15243 15242 8150 2 TAADVVSPGANSVDSR TEKVKDPKTAADVVSP GANSVDSRVQRPKEES K T A S R V 3 1 1 2 0 0 0 1 0 0 0 0 0 0 1 3 1 0 0 3 0 0 16 0 1544.7431 Q01804 Q01804 1000 1015 OTUD4 OTU domain-containing protein 4 yes yes 2 1.1911E-22 157.47 By MS/MS By MS/MS 1 1 62544000 32876000 29668000 6272 1982 7151 15802;15803 15244;15245 15244 3807 2 TAAGSSPPGGTKPSYTMVSSVIPETSSLQSSAFR SVSPAVSKTAAGSSPP SLQSSAFREGTSLGLT K T A F R E 3 1 0 0 0 1 1 3 0 1 1 1 1 1 4 9 4 0 1 2 0 0 34 1 3384.6507 Q8WXI7 Q8WXI7 658 691 MUC16 Mucin-16 yes yes 3 0.01069 54.732 By MS/MS 1 0 0 0 6273 2571 7152 15804 15246 15246 1032 7754;7755;8407 1 TAAINQMLEK TGESGVGKTAAINQML AINQMLEKLEGPGAFD K T A E K L 2 0 1 0 0 1 1 0 0 1 1 1 1 0 0 0 1 0 0 0 0 0 10 0 1117.5801 H7C164;H7BXS7 H7C164 115 124 DNAH14 yes no 2 0.020286 56.916 By MS/MS 1 0 0 0 6274 1259 7153 15805 15247 15247 453 1 TAAPSPSLLYK YNAVKPEKTAAPSPSL PSPSLLYKSTKEDRRS K T A Y K S 2 0 0 0 0 0 0 0 0 0 2 1 0 0 2 2 1 0 1 0 0 0 11 0 1146.6285 Q9BTC0 Q9BTC0 519 529 DIDO1 Death-inducer obliterator 1 yes yes 2 0.016978 67.519 By MS/MS 1 8259900 0 8259900 6275 2747 7154 15806 15248 15248 5712 1 TAASVLNNFIESPSK SEKTPTKRTAASVLNN NFIESPSKLLDTPIKN R T A S K L 2 0 2 0 0 0 1 0 0 1 1 1 0 1 1 3 1 0 0 1 0 0 15 0 1576.8097 E7EPB1;E7EQS8;Q6N021 E7EPB1 1096 1110 TET2 Methylcytosine dioxygenase TET2 yes no 2 0.024249 57.885 By matching By MS/MS 1 1 44349000 25227000 19122000 6276 798 7155 15807;15808 15249 15249 1425 0 TADGRVSPAGGTLDDKPK TKITHLVRTADGRVSP GTLDDKPKEQLQRSLP R T A P K E 2 1 0 3 0 0 0 3 0 0 1 2 0 0 2 1 2 0 0 1 0 0 18 2 1783.9064 C9JA69;Q8WY36 C9JA69 788 805 BBX HMG box transcription factor BBX yes no 3 0.0016551 88.385 By MS/MS By MS/MS 1 1 59744000 30673000 29070000 6277 651 7156 15809;15810 15250;15251 15251 1212 2 TADSSSSEDEEEYVVEK ________________ EEEYVVEKVLDRRVVK R T A E K V 1 0 0 2 0 0 5 0 0 0 0 1 0 0 0 4 1 0 1 2 0 0 17 0 1902.7854 F8VNY3;P45973 F8VNY3 8 24 CBX5 Chromobox protein homolog 5 yes no 2 1.3787E-06 130.4 By MS/MS By matching 1 1 35172000 18493000 16679000 6278 999 7157 15811;15812 15252 15252 1877 1 TADSVFCPHYEK SDIIIPLRTADSVFCP VFCPHYEKVSGDYGHP R T A E K V 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 1 0 1 1 0 0 12 0 1452.6344 P52799 P52799 295 306 EFNB2 Ephrin-B2 yes yes 2;3 1.6839E-26 180.66 By MS/MS By MS/MS 1 2 21361000 9281400 12079000 6279 1892 7158 15813;15814;15815 15253;15254;15255 15253 8297 3 TAEAQLAYELQGAR FSEEVNIKTAEAQLAY AYELQGAREQQKIRQE K T A A R E 4 1 0 0 0 2 2 1 0 0 2 0 0 0 0 0 1 0 1 0 0 0 14 0 1519.7631 K7EKW9;J3QLD9;E7EMK3;Q14254 K7EKW9 168 181 FLOT2 Flotillin-2 yes no 2 3.1906E-53 193.62 By matching By MS/MS 1 1 30770000 20771000 9998700 6280 791 7159 15816;15817 15256;15257 15257 8120 2 TAELSPK TVSTPVSKTAELSPKN KTAELSPKNLLSPSSF K T A P K N 1 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 7 0 744.40177 E7EVZ1;Q86UP3 E7EVZ1 2733 2739 ZFHX4 Zinc finger homeobox protein 4 yes no 2 0.026552 79.986 By matching By MS/MS 1 1 7569100 3914000 3655200 6281 831 7160 15818;15819 15258 15258 1550 1 TAENATSGETLEENEAGD KKKKKASKTAENATSG LEENEAGD________ K T A G D - 3 0 2 1 0 0 5 2 0 0 1 0 0 0 0 1 3 0 0 0 0 0 18 0 1836.7497 Q9UQ80 Q9UQ80 377 394 PA2G4 Proliferation-associated protein 2G4 yes yes 2 0.0019471 92.781 By MS/MS By MS/MS 1 1 38498000 21714000 16784000 6282 3075 7161 15820;15821 15259;15260 15260 2 TAESQTPTPSATSFFSGK STEKESEKTAESQTPT ATSFFSGKSPVTTLLE K T A G K S 2 0 0 0 0 1 1 1 0 0 0 1 0 2 2 4 4 0 0 0 0 0 18 0 1842.8636 P55265;H0YCK3 P55265 596 613 ADAR Double-stranded RNA-specific adenosine deaminase yes no 2;3 7.5567E-107 222.93 By MS/MS By MS/MS 2 2 303880000 159400000 144470000 6283 1913 7162 15822;15823;15824;15825 15261;15262;15263;15264;15265;15266;15267;15268 15265 3702;7495 8 TAFDEAIAELDTLNEDSYK ELACTLAKTAFDEAIA TLNEDSYKDSTLIMQL K T A Y K D 3 0 1 3 0 0 3 0 0 1 2 1 0 1 0 1 2 0 1 0 0 0 19 0 2143.9797 P27348 P27348 194 212 YWHAQ 14-3-3 protein theta yes yes 2 1.5663E-06 119.62 By MS/MS 1 0 0 0 6284 1768 7163 15826 15269 15269 1 TAFDEAIAELDTLNEESYK EKACSLAKTAFDEAIA TLNEESYKDSTLIMQL K T A Y K D 3 0 1 2 0 0 4 0 0 1 2 1 0 1 0 1 2 0 1 0 0 0 19 0 2157.9954 P31946 P31946 196 214 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2 0.00093824 106.3 By MS/MS 1 4507700 0 4507700 6285 1786 7164 15827 15270 15270 1 TAFDEAIAELDTLSEESYK EKACSLAKTAFDEAIA TLSEESYKDSTLIMQL K T A Y K D 3 0 0 2 0 0 4 0 0 1 2 1 0 1 0 2 2 0 1 0 0 0 19 0 2130.9845 E7EX29;P63104;B0AZS6;B7Z2E6;H0YB80 E7EX29 202 220 YWHAZ 14-3-3 protein zeta/delta yes no 2 1.4471E-56 183.65 By MS/MS By MS/MS 1 1 58722000 34846000 23876000 6286 838 7165 15828;15829 15271;15272 15272 1566 2 TAFQEALDAAGDK MVKQIESKTAFQEALD ALDAAGDKLVVVDFSA K T A D K L 4 0 0 2 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 13 0 1335.6307 P10599 P10599 9 21 TXN Thioredoxin yes yes 2 3.8108E-11 148.78 By MS/MS By MS/MS 1 1 112230000 65625000 46605000 6287 1675 7166 15830;15831 15273;15274;15275 15273 3 TAFYNEDDSEEEQR RTRNQGRRTAFYNEDD DDSEEEQRQLLFEDTS R T A Q R Q 1 1 1 2 0 1 4 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 14 0 1731.686 Q8WWQ0 Q8WWQ0 1775 1788 PHIP PH-interacting protein yes yes 2 4.246E-26 166.79 By MS/MS By MS/MS 1 1 76745000 35065000 41680000 6288 2565 7167 15832;15833 15276;15277 15277 5254 2 TAGFPNGSLGK DEHNAALRTAGFPNGS FPNGSLGKRPSGSLGK R T A G K R 1 0 1 0 0 0 0 3 0 0 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1047.5349 Q9NZH0 Q9NZH0 347 357 GPRC5B G-protein coupled receptor family C group 5 member B yes yes 2 0.011741 67.519 By MS/MS By MS/MS 1 1 0 0 0 6289 2957 7168 15834;15835 15278;15279 15279 6230 2 TAHNSEAADLEESFNEHELEPSSPK VYCRKHKKTAHNSEAA ELEPSSPKSKKKSRKG K T A P K S 3 0 2 1 0 0 6 0 2 0 2 1 0 1 2 4 1 0 0 0 0 0 25 0 2767.2209 Q5JRC6;A0A0D9SGE8 Q5JRC6 134 158 PHF6 yes no 3;4 4.5345E-05 78.057 By MS/MS By MS/MS 1 2 88253000 10197000 78057000 6290 348 7169 15836;15837;15838 15280;15281;15282 15282 620;621 3 TAHNSEADLEESFNEHELEPSSPK VYCRKHKKTAHNSEAD ELEPSSPKSKKKSRKG K T A P K S 2 0 2 1 0 0 6 0 2 0 2 1 0 1 2 4 1 0 0 0 0 0 24 0 2696.1838 Q8IWS0 Q8IWS0 134 157 PHF6 PHD finger protein 6 yes yes 3;4 1.0988E-05 85.7 By MS/MS By MS/MS 4 3 508450000 429220000 79230000 6291 2431 7170;7171;7172 15839;15840;15841;15842;15843;15844;15845 15283;15284;15285;15286;15287;15288;15289 15285 117 4972;4973;4974 7 TALPTSGSSAGELELLAGEVPARSPGAFDMSGVR FSDFDRLRTALPTSGS AFDMSGVRGSLAEAVG R T A V R G 5 2 0 1 0 0 3 5 0 0 4 0 1 1 3 5 2 0 0 2 0 0 34 1 3329.6562 Q9Y6I3 Q9Y6I3 412 445 EPN1 Epsin-1 yes yes 3 0.029912 40.92 By MS/MS By matching 1 1 64817000 36110000 28707000 6292 3149 7173 15846;15847 15290 15290 1249 1 TAPPALPTGYDSEEEEESRPMSYDEK KLPKKATKTAPPALPT RPMSYDEKRQLSLDIN K T A E K R 2 1 0 2 0 0 6 1 0 0 1 1 1 0 4 3 2 0 2 0 0 0 26 1 2927.2655 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A0G2JHN8;A0A140T9I1 H0Y6K2 628 653 BRD2 Bromodomain-containing protein 2 yes no 3 0.0010545 61.537 By MS/MS By MS/MS 2 2 280220000 142660000 137570000 6293 353 7174;7175 15848;15849;15850;15851 15291;15292;15293;15294;15295 15292 140 633;634;6933 5 TAPPALPTGYDSEEEEESRPMSYDEKR KLPKKATKTAPPALPT PMSYDEKRQLSLDINK K T A K R Q 2 2 0 2 0 0 6 1 0 0 1 1 1 0 4 3 2 0 2 0 0 0 27 2 3083.3666 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A0G2JHN8;A0A140T9I1 H0Y6K2 628 654 BRD2 Bromodomain-containing protein 2 yes no 3 0.0032851 60.735 By MS/MS By matching 1 1 50656000 27852000 22804000 6294 353 7176 15852;15853 15296 15296 633;634;6933 1 TAPSSPLTSPSDTR RNTGGDSKTAPSSPLT LTSPSDTRSFFKVPEM K T A T R S 1 1 0 1 0 0 0 0 0 0 1 0 0 0 3 4 3 0 0 0 0 0 14 0 1415.6892 A0A087WVA8;Q8IWB9 A0A087WVA8 262 275 TEX2 Testis-expressed sequence 2 protein yes no 2 0.0024843 82.837 By MS/MS By MS/MS 1 1 15968000 8403600 7564800 6295 74 7177 15854;15855 15297;15298;15299 15298 134;135 2 TAPTALGITLSSSPTSTPELR ARGAIEERTAPTALGI PTSTPELRVDASTQKG R T A L R V 2 1 0 0 0 0 1 1 0 1 3 0 0 0 3 4 5 0 0 0 0 0 21 0 2099.111 F5H1U9;O75970 F5H1U9 342 362 MPDZ Multiple PDZ domain protein yes no 3 0.00019569 82.475 By MS/MS By MS/MS 1 1 27791000 15938000 11853000 6296 962 7178 15856;15857 15300;15301 15301 1813;1814 2 TAPTLSPEHWK SGPPELRKTAPTLSPE TLSPEHWKAVPPVSPE K T A W K A 1 0 0 0 0 0 1 0 1 0 1 1 0 0 2 1 2 1 0 0 0 0 11 0 1265.6404 Q96JM3 Q96JM3 400 410 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 0.0020523 98.368 By MS/MS By MS/MS 2 2 62713000 29299000 33415000 6297 2674 7179 15858;15859;15860;15861 15302;15303;15304 15302 5521 3 TAQNGTQQLPR ARKSSASKTAQNGTQQ NGTQQLPRTSASLASG K T A P R T 1 1 1 0 0 3 0 1 0 0 1 0 0 0 1 0 2 0 0 0 0 0 11 0 1212.6211 Q2VWP7 Q2VWP7 983 993 PRTG Protogenin yes yes 3 0.025255 45.158 By MS/MS 1 846700 0 846700 6298 2184 7180 15862 15305 15305 0 TAQVPSPPR ITIDDPVRTAQVPSPP AQVPSPPRGKISNIVH R T A P R G 1 1 0 0 0 1 0 0 0 0 0 0 0 0 3 1 1 0 0 1 0 0 9 0 951.51378 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 949 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 2 0.001493 122.51 By MS/MS By MS/MS 1 1 276240000 147580000 128650000 6299 810;1073 7181 15863;15864 15306;15307;15308;15309;15310;15311;15312;15313;15314;15315;15316;15317 15308 1463 12 TAQVPSPPRGK ITIDDPVRTAQVPSPP VPSPPRGKISNIVHIS R T A G K I 1 1 0 0 0 1 0 1 0 0 0 1 0 0 3 1 1 0 0 1 0 0 11 1 1136.6302 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 951 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 2 0.0072697 84.169 By MS/MS By MS/MS 1 1 65169000 36320000 28848000 6300 810;1073 7182 15865;15866 15318;15319;15320;15321 15320 1463 4 TASEGDGGAAAGAAAAGAR KCSSCRVRTASEGDGG GAAAAGARPVSVAGSP R T A A R P 9 1 0 1 0 0 1 5 0 0 0 0 0 0 0 1 1 0 0 0 0 0 19 0 1530.7023 Q9Y4H2 Q9Y4H2 363 381 IRS2 Insulin receptor substrate 2 yes yes 2 0.00038787 105 By MS/MS By MS/MS 1 1 15142000 9150400 5991300 6301 3120 7183 15867;15868 15322;15323 15323 6686;7951 2 TASEINFDK NRNARAERTASEINFD ASEINFDKLQFEPPLR R T A D K L 1 0 1 1 0 0 1 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 9 0 1023.4873 A0A0A0MQR1;Q9Y4K4 A0A0A0MQR1 333 341 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 5 yes no 2 0.0092988 79.036 By MS/MS 1 3504600 0 3504600 6302 185 7184 15869 15324 15324 325 1 TASEINFDKLQFEPPLR NRNARAERTASEINFD LQFEPPLRKETEARDE R T A L R K 1 1 1 1 0 1 2 0 0 1 2 1 0 2 2 1 1 0 0 0 0 0 17 1 2004.0316 A0A0A0MQR1;Q9Y4K4 A0A0A0MQR1 333 349 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 5 yes no 3 0.031612 59.857 By MS/MS 1 0 0 0 6303 185 7185 15870 15325 15325 325 1 TASEINFDKLQFEPPLRK NRNARAERTASEINFD QFEPPLRKETEARDEM R T A R K E 1 1 1 1 0 1 2 0 0 1 2 2 0 2 2 1 1 0 0 0 0 0 18 2 2132.1266 A0A0A0MQR1;Q9Y4K4 A0A0A0MQR1 333 350 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 5 yes no 3 0.0083727 68.369 By MS/MS By MS/MS 1 1 34698000 19917000 14781000 6304 185 7186 15871;15872 15326;15327 15327 325 2 TASELLLDR SLYQGLMRTASELLLD ASELLLDRRLRIPELE R T A D R R 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 0 0 0 9 0 1016.5502 Q92508 Q92508 1644 1652 PIEZO1 Piezo-type mechanosensitive ion channel component 1 yes yes 2 0.0042223 105.46 By MS/MS By MS/MS 1 1 15801000 8623900 7177000 6305 2578 7187 15873;15874 15328;15329;15330 15330 5291 3 TASELLLDRR SLYQGLMRTASELLLD SELLLDRRLRIPELEE R T A R R L 1 2 0 1 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 0 0 0 10 1 1172.6513 Q92508 Q92508 1644 1653 PIEZO1 Piezo-type mechanosensitive ion channel component 1 yes yes 2 0.0168 70.728 By MS/MS By matching 1 1 32972000 17734000 15237000 6306 2578 7188 15875;15876 15331 15331 5291 1 TASESISNLSEAGSIK PPISNLTKTASESISN LSEAGSIKKGERELKI K T A I K K 2 0 1 0 0 0 2 1 0 2 1 1 0 0 0 5 1 0 0 0 0 0 16 0 1592.7893 F5H6A0;J3KP58;P30622;F5H1T5;F6VGP8 F5H6A0 191 206 CLIP1 CAP-Gly domain-containing linker protein 1 yes no 2 2.3097E-31 164.53 By MS/MS By MS/MS 5 5 83415000 43275000 40141000 6307 981 7189;7190 15877;15878;15879;15880;15881;15882;15883;15884;15885;15886 15332;15333;15334;15335;15336;15337;15338 15332 1838;1839;1840;1841;1842 7 TASETRSEGSEYEEIPKR HPPAPRGRTASETRSE EYEEIPKRRRQRGSET R T A K R R 1 2 0 0 0 0 5 1 0 1 0 1 0 0 1 3 2 0 1 0 0 0 18 2 2067.9709 P48634 P48634 1083 1100 PRRC2A Protein PRRC2A yes yes 3 0.002002 76.614 By MS/MS By MS/MS 1 2 71427000 14424000 57003000 6308 1846 7191;7192 15887;15888;15889 15339;15340;15341 15339 3545;3546;3547 2 TASFSESR TSTPAPSRTASFSESR TASFSESRADEVAPAK R T A S R A 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 3 1 0 0 0 0 0 8 0 883.40356 P53396 P53396 453 460 ACLY ATP-citrate synthase yes yes 2 0.01078 89.029 By MS/MS By MS/MS 1 1 428330000 234850000 193480000 6309 1895 7193 15890;15891 15342;15343;15344;15345;15346 15343 3674 5 TASFSESRADEVAPAK TSTPAPSRTASFSESR ADEVAPAKKAKPAMPQ R T A A K K 4 1 0 1 0 0 2 0 0 0 0 1 0 1 1 3 1 0 0 1 0 0 16 1 1664.8006 P53396 P53396 453 468 ACLY ATP-citrate synthase yes yes 3 0.0041541 68.413 By MS/MS By matching 1 1 27021000 13212000 13808000 6310 1895 7194 15892;15893 15347 15347 3674 1 TASFSESRADEVAPAKK TSTPAPSRTASFSESR DEVAPAKKAKPAMPQD R T A K K A 4 1 0 1 0 0 2 0 0 0 0 2 0 1 1 3 1 0 0 1 0 0 17 2 1792.8955 P53396 P53396 453 469 ACLY ATP-citrate synthase yes yes 3 0.0019789 86.575 By MS/MS By MS/MS 1 1 90287000 48939000 41347000 6311 1895 7195 15894;15895 15348;15349 15349 3674 2 TASGSSVTSLDGTR MTRLMRSRTASGSSVT VTSLDGTRSRSHTSEG R T A T R S 1 1 0 1 0 0 0 2 0 0 1 0 0 0 0 4 3 0 0 1 0 0 14 0 1337.6423 E5RJY1;E7ESM1;Q92597 E5RJY1 37 50 NDRG1 Protein NDRG1 yes no 2 1.5554E-20 156.2 By MS/MS By MS/MS 1 1 101870000 55540000 46326000 6312 787 7196 15896;15897 15350;15351 15350 1402 2 TASISSSPSEGTPTVGSYGCTPQSLPK DSREHRPRTASISSSP CTPQSLPKFQHPSHEL R T A P K F 1 0 0 0 1 1 1 3 0 1 1 1 0 0 4 7 4 0 1 1 0 0 27 0 2695.2647 Q6PKG0 Q6PKG0 845 871 LARP1 La-related protein 1 yes yes 2;3 0.00031514 67.675 By MS/MS By MS/MS 3 3 152980000 78895000 74082000 6313 2330 7197;7198 15898;15899;15900;15901;15902;15903 15352;15353;15354;15355;15356 15353 4703;4704;4705;4706;4707;7669 5 TASLPGYGR ASHIPSSKTASLPGYG ASLPGYGRNGLHRPVS K T A G R N 1 1 0 0 0 0 0 2 0 0 1 0 0 0 1 1 1 0 1 0 0 0 9 0 920.47158 J3QSX6;F8W8M4;A0A0A0MRL6;O14639 J3QSX6 276 284 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.0044352 93.561 By matching By MS/MS 1 1 71342000 34390000 36953000 6314 220 7199 15904;15905 15357 15357 387 1 TASLTSAASVDGNR MTRLSRSRTASLTSAA AASVDGNRSRSRTLSQ R T A N R S 3 1 1 1 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 0 0 14 0 1348.6583 G3V578;H0YJT9;A0A0A0MS87;Q9UN36 G3V578 243 256 NDRG2 Protein NDRG2 yes no 2 0.02721 60.631 By MS/MS 1 2554600 0 2554600 6315 241 7200 15906 15358 15358 425 1 TASLVTR REHFATIRTASLVTRQ RTASLVTRQMQEHEQD R T A T R Q 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 7 0 746.42865 Q7L7X3 Q7L7X3 443 449 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 2 0.025667 94.309 By MS/MS By MS/MS 1 1 32426000 19010000 13416000 6316 2366 7201 15907;15908 15359;15360;15361 15360 4798 3 TASPLPLRPDAPVEK LHQQYTSRTASPLPLR RPDAPVEKSPEETATQ R T A E K S 2 1 0 1 0 0 1 0 0 0 2 1 0 0 4 1 1 0 0 1 0 0 15 1 1589.8777 Q9HCK8 Q9HCK8 1993 2007 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 2;3 0.0019189 98.508 By MS/MS By MS/MS 2 2 64514000 30900000 33614000 6317 2877 7202 15909;15910;15911;15912 15362;15363;15364;15365 15363 6061;7865 4 TASPPPPPK PSPPPKRRTASPPPPP ASPPPPPKRRASPSPP R T A P K R 1 0 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 9 0 890.48617 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 623 631 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0024398 111.27 By MS/MS By MS/MS 2 2 128730000 67676000 61052000 6318 511 7203;7204 15913;15914;15915;15916 15366;15367 15366 964;6977 2 TASPPPPPKR PSPPPKRRTASPPPPP SPPPPPKRRASPSPPP R T A K R R 1 1 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 10 1 1046.5873 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 623 632 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.002769 71.153 By MS/MS By MS/MS 3 4 152190000 98297000 53896000 6319 511 7205;7206 15917;15918;15919;15920;15921;15922;15923 15368;15369;15370;15371;15372;15373;15374;15375 15370 964;6977 8 TASQEGCQELTQEQR FSQPPVLRTASQEGCQ QELTQEQRDQLRADIS R T A Q R D 1 1 0 0 1 4 3 1 0 0 1 0 0 0 0 1 2 0 0 0 0 0 15 0 1763.7744 A0A0C4DG33;O43933 A0A0C4DG33 1122 1136 PEX1 Peroxisome biogenesis factor 1 yes no 2 9.9024E-11 141.1 By MS/MS By MS/MS 1 1 71319000 40902000 30417000 6320 308 7207 15924;15925 15376;15377 15376 537 2 TASQGPQTDSVIQNSENIK WQHFPRYRTASQGPQT IQNSENIKAYHSGEGH R T A I K A 1 0 2 1 0 3 1 1 0 2 0 1 0 0 1 3 2 0 0 1 0 0 19 0 2015.976 Q9NZN5;E9PMR6 Q9NZN5 1286 1304 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2;3 1.046E-118 224.99 By MS/MS By MS/MS 2 2 96549000 49422000 47127000 6321 2962 7208 15926;15927;15928;15929 15378;15379;15380;15381 15381 6239 4 TASRPAPLVQQLSPSLLPNSK KPANTLVKTASRPAPL PSLLPNSKSPREVPSP K T A S K S 2 1 1 0 0 2 0 0 0 0 4 1 0 0 4 4 1 0 0 1 0 0 21 1 2203.2325 Q9Y6X9 Q9Y6X9 684 704 MORC2 MORC family CW-type zinc finger protein 2 yes yes 3 0.00015904 87.098 By MS/MS By MS/MS 1 1 20819000 12218000 8601700 6322 3155 7209 15930;15931 15382;15383;15384 15383 6750;6751 3 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR EEIMSGARTASTPTPP VIVRPDDRSQGAIIAD R T A D R S 3 2 1 2 0 3 2 4 0 1 1 0 0 0 6 1 5 0 0 3 0 0 34 1 3455.7281 E7EX73;E9PGM1;E7EUU4;Q04637;C9JWH7;C9J556;C9JSU8;C9JWW9;C9J6B6;C9J2Z7;C9K073;C9JF13 E7EX73 38 71 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 6.681E-05 63.932 By MS/MS By MS/MS 2 2 57536000 29516000 28021000 6323 826 7210;7211 15932;15933;15934;15935 15385;15386 15385 1528;7091 2 TATCHSSSSPPIDAASAEPYGFR STSAVKEKTATCHSSS SAEPYGFRASVLFDTM K T A F R A 4 1 0 1 1 0 1 1 1 1 0 0 0 1 3 5 2 0 1 0 0 0 23 0 2408.0703 P46821 P46821 1811 1833 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 7.9118E-05 83.436 By MS/MS By MS/MS 1 1 36613000 18191000 18422000 6324 1840 7212 15936;15937 15387;15388 15388 8275 2 TATESFASDPILYRPVAVALDTK AETIKNVRTATESFAS VAVALDTKGPEIRTGL R T A T K G 4 1 0 2 0 0 1 0 0 1 2 1 0 1 2 2 3 0 1 2 0 0 23 1 2464.285 P14618;H3BTN5;H3BQ34;H3BT25;H3BUW1;H3BTJ2 P14618 93 115 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 3 0.0021905 102.43 By MS/MS By MS/MS 1 1 24913000 11822000 13091000 6325 1700 7213 15938;15939 15389;15390 15390 1 TATQTGHTLLEDYQIVDNSQR GIKAMVKKTATQTGHT QIVDNSQRENQEGAAN K T A Q R E 1 1 1 2 0 3 1 1 1 1 2 0 0 0 0 1 4 0 1 1 0 0 21 0 2389.151 Q8N0X7 Q8N0X7 616 636 SPG20 Spartin yes yes 2;3 3.265E-05 109.83 By MS/MS By MS/MS 2 2 155510000 73172000 82336000 6326 2452 7214 15940;15941;15942;15943 15391;15392;15393;15394 15393 8392 4 TAVAPIER GIAAAISKTAVAPIER TAVAPIERVKLLLQVQ K T A E R V 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 8 0 855.48142 P12236;P05141;P12235;V9GYG0;Q9H0C2 P12236 24 31 SLC25A6;SLC25A5;SLC25A4;SLC25A31 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed yes no 2 0.0071488 93.195 By MS/MS By matching 1 1 15997000 8649300 7347300 6327 1639 7215 15944;15945 15395 15395 0 TAVAPSAVNLADPRTPTAPAVNLAGAR AMNLASPRTAVAPSAV AVNLAGARTPAALAAL R T A A R T 8 2 2 1 0 0 0 1 0 0 2 0 0 0 4 1 3 0 0 3 0 0 27 1 2600.4034 Q9UQ35 Q9UQ35 2275 2301 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3;4 2.8013E-07 94.259 By MS/MS By MS/MS 2 2 591960000 322440000 269520000 6328 3074 7216 15946;15947;15948;15949 15396;15397;15398;15399 15396 7935;7936 4 TAVETAVLLLR AVKLQTYKTAVETAVL ETAVLLLRIDDIVSGH K T A L R I 2 1 0 0 0 0 1 0 0 0 3 0 0 0 0 0 2 0 0 2 0 0 11 0 1184.7129 B4DUR8;P49368 B4DUR8 463 473 CCT3 T-complex protein 1 subunit gamma yes no 2 0.014151 104.42 By MS/MS 1 0 0 0 6329 565 7217 15950 15400 15400 1 TAVIPINGSPR MLLKEPYKTAVIPING IPINGSPRTPRRGQNR K T A P R T 1 1 1 0 0 0 0 1 0 2 0 0 0 0 2 1 1 0 0 1 0 0 11 0 1123.635 P06400 P06400 241 251 RB1 Retinoblastoma-associated protein yes yes 2 0.0050721 80.746 By MS/MS By MS/MS 3 2 96439000 49952000 46487000 6330 1645 7218;7219 15951;15952;15953;15954;15955 15401;15402;15403;15404 15403 68 3105 4 TAVSVTQGGHSR EANIYAVKTAVSVTQG VTQGGHSRTSSPTPPS K T A S R T 1 1 0 0 0 1 0 2 1 0 0 0 0 0 0 2 2 0 0 2 0 0 12 0 1198.6054 P40425 P40425 320 331 PBX2 Pre-B-cell leukemia transcription factor 2 yes yes 2 0.0094827 63.727 By MS/MS By MS/MS 1 2 20624000 11176000 9447900 6331 1812 7220 15956;15957;15958 15405;15406 15405 7440 0 TAVVVGTITDDVR KLPGRENKTAVVVGTI GTITDDVRVQEVPKLK K T A V R V 1 1 0 2 0 0 0 1 0 1 0 0 0 0 0 0 3 0 0 4 0 0 13 0 1344.7249 F8VUA6;G3V203;H0YHA7;J3QQ67;Q07020;F8VYV2;A0A075B7A0 F8VUA6 27 39 RPL18 60S ribosomal protein L18 yes no 2 0.0032813 107.03 By MS/MS By matching 1 1 12321000 6649000 5672000 6332 1012 7221 15959;15960 15407 15407 1 TAYISIQQFTEMNLLSDYR TCNGVRDKTAYISIQQ MNLLSDYRFLEDVART K T A Y R F 1 1 1 1 0 2 1 0 0 2 2 0 1 1 0 2 2 0 2 0 0 0 19 0 2292.1096 Q9NWK9 Q9NWK9 261 279 ZNHIT6 Box C/D snoRNA protein 1 yes yes 2 0.030333 50.467 By MS/MS 1 0 0 0 6333 2934 7222 15961 15408 15408 1165 1 TCFSPNR IGVDLIMKTCFSPNRV KTCFSPNRVIGLSSDL K T C N R V 0 1 1 0 1 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 7 0 880.38614 O00303;A0A0D9SEZ9 O00303 255 261 EIF3F Eukaryotic translation initiation factor 3 subunit F yes no 2 0.026082 88.177 By MS/MS By MS/MS 1 1 16358000 8887700 7470100 6334 1433 7223 15962;15963 15409;15410 15410 2633 2 TCFSPNRVIGLSSDLQQVGGASAR IGVDLIMKTCFSPNRV QVGGASARIQDALSTV K T C A R I 2 2 1 1 1 2 0 3 0 1 2 0 0 1 1 4 1 0 0 2 0 0 24 1 2519.2551 O00303 O00303 255 278 EIF3F Eukaryotic translation initiation factor 3 subunit F yes yes 3 5.027E-06 89.622 By MS/MS By matching 1 1 15548000 6868500 8679000 6335 1433 7224 15964;15965 15411;15412 15412 2633;2634;2635;2636 2 TCHPQYCHLGRDVTSQLDHAK GVLVSALKTCHPQYCH TSQLDHAKEKNGGCYS K T C A K E 1 1 0 2 2 2 0 1 3 0 2 1 0 0 1 1 2 0 1 1 0 0 21 1 2522.1543 A6NIM6 A6NIM6 268 288 SLC15A5 Solute carrier family 15 member 5 yes yes 2 0.025154 52.99 By MS/MS 1 0 0 0 6336 473 7225 15966 15413 15413 866 1 TCNSPQNSTDSVSDIVPDSPFPGALGSDTR MPPSVTPRTCNSPQNS GALGSDTRTAGQPEGG R T C T R T 1 1 2 4 1 1 0 2 0 1 1 0 0 1 4 6 3 0 0 2 0 0 30 0 3120.3942 Q14694 Q14694 208 237 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 3 5.3937E-05 71.212 By MS/MS 1 32701000 32701000 0 6337 2106 7226 15967 15414 15414 7586 1 TCPSLSPTSPLNNK EEEPSAKRTCPSLSPT PTSPLNNKGILSLPHQ R T C N K G 0 0 2 0 1 0 0 0 0 0 2 1 0 0 3 3 2 0 0 0 0 0 14 0 1514.7399 O75925 O75925 480 493 PIAS1 E3 SUMO-protein ligase PIAS1 yes yes 2 0.024169 58.071 By MS/MS 1 6944400 6944400 0 6338 1559 7227 15968 15415 15415 2947;2948 1 TCSFGGFDLTNR LGSLSHGRTCSFGGFD GGFDLTNRSLHVGSNN R T C N R S 0 1 1 1 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 0 0 0 12 0 1373.6034 O94885;A0A1B0GWB9 O94885 405 416 SASH1 SAM and SH3 domain-containing protein 1 yes no 2 0.00033122 114.87 By MS/MS By MS/MS 1 1 30694000 15362000 15332000 6339 1573 7228 15969;15970 15416;15417 15416 2982 2 TCSLPDLSK ANNPKMLRTCSLPDLS CSLPDLSKLFRTLMDV R T C S K L 0 0 0 1 1 0 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 9 0 1019.4957 Q96PY6 Q96PY6 1050 1058 NEK1 Serine/threonine-protein kinase Nek1 yes yes 2 0.0073333 82.494 By matching By MS/MS 1 1 91670000 51782000 39888000 6340 2699 7229 15971;15972 15418 15418 5570 1 TCSPESQQIYGDIK IQVQLCFKTCSPESQQ QQIYGDIKDVRLDGES K T C I K D 0 0 0 1 1 2 1 1 0 2 0 1 0 0 1 2 1 0 1 0 0 0 14 0 1624.7403 J3KNW1;Q4VC44;I3L287 J3KNW1 472 485 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 yes no 2 0.025783 80.871 By MS/MS 1 0 0 0 6341 1323 7230 15973 15419 15419 2452 1 TDALTSSPGR SPGRSSRRTDALTSSP ALTSSPGRDLPPFEDE R T D G R D 1 1 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1003.4934 P49736;C9J013;C9JZ21;F8WDM3 P49736 35 44 MCM2 DNA replication licensing factor MCM2 yes no 2 9.3328E-25 185.99 By MS/MS By MS/MS 2 3 73332000 21898000 51434000 6342 1857 7231;7232 15974;15975;15976;15977;15978 15420;15421;15422;15423;15424;15425 15425 3581;3582;7468 5 TDASSASSFLDSDELER KVGHVTERTDASSASS LDSDELERTGIDLGTT R T D E R T 2 1 0 3 0 0 2 0 0 0 2 0 0 1 0 5 1 0 0 0 0 0 17 0 1828.7963 G3XAC6;Q14498;H0Y4X3;A0A0U1RQW2;A0A0U1RQH7 G3XAC6 330 346 RBM39 RNA-binding protein 39 yes no 2 4.6614E-07 133.52 By MS/MS By MS/MS 1 1 14987000 7584900 7401700 6343 1089 7233 15979;15980 15426;15427 15426 2049 2 TDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEAR EQPGDGERTDCEPVGL EAPSPEARDSKEDGRK R T D A R D 9 1 0 1 1 1 10 1 0 0 3 0 0 0 5 6 2 0 0 2 0 0 42 0 4310.9496 Q15424;Q14151 Q15424 307 348 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 yes no 3;4 3.4675E-14 87.484 By matching By MS/MS 2 2 497110000 169880000 327240000 6344 2139 7234 15981;15982;15983;15984 15428;15429 15429 4245 2 TDESSPVLSPR FHISSHSKTDESSPVL SSPVLSPRKPSHPVMD K T D P R K 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1186.583 Q8NA72 Q8NA72 101 111 POC5 Centrosomal protein POC5 yes yes 2 0.00063847 110.8 By MS/MS By MS/MS 1 1 10875000 4989200 5885600 6345 2491 7235 15985;15986 15430;15431 15430 5085 2 TDEVPAGGSRSEAEDEDDEDYVPYVPLR EPERKRARTDEVPAGG YVPYVPLRQRRQLLPG R T D L R Q 2 2 0 5 0 0 5 2 0 0 1 0 0 0 3 2 1 0 2 3 0 0 28 1 3109.3636 D6RD33;D6RGI7;J3KNN5;Q9UJV9 D6RD33 13 40 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 3;4 0.00025768 67.832 By MS/MS By MS/MS 2 2 112440000 60856000 51586000 6346 758 7236;7237 15987;15988;15989;15990 15432;15433;15434 15432 1366;1367 3 TDGEPGPQGWSPR LAELFQWKTDGEPGPQ GPQGWSPRERAALQEE K T D P R E 0 1 0 1 0 1 1 3 0 0 0 0 0 0 3 1 1 1 0 0 0 0 13 0 1382.6215 Q9H773 Q9H773 75 87 DCTPP1 dCTP pyrophosphatase 1 yes yes 2 0.0122 71.08 By MS/MS By matching 1 1 13322000 7782300 5539300 6347 2846 7238 15991;15992 15435 15435 5987 1 TDGFAEAIHSPQVAGVPR PTLVVPHRTDGFAEAI PQVAGVPRFRFGPPED R T D P R F 3 1 0 1 0 1 1 2 1 1 0 0 0 1 2 1 1 0 0 2 0 0 18 0 1850.9275 P12270 P12270 2146 2163 TPR Nucleoprotein TPR yes yes 2;3 6.5763E-16 150.65 By MS/MS By MS/MS 4 3 734950000 423330000 311620000 6348 1686 7239 15993;15994;15995;15996;15997;15998;15999 15436;15437;15438;15439;15440;15441;15442;15443;15444;15445 15438 3187 9 TDGSISGDRQPVTVADYISR RRRNRGNRTDGSISGD TVADYISRAESQSRQR R T D S R A 1 2 0 3 0 1 0 2 0 2 0 0 0 0 1 3 2 0 1 2 0 0 20 1 2136.0447 P51116 P51116 598 617 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 2;3 3.7971E-05 99.064 By MS/MS By MS/MS 4 4 634580000 303690000 330890000 6349 1873 7240;7241 16000;16001;16002;16003;16004;16005;16006;16007 15446;15447;15448;15449;15450;15451;15452;15453 15453 3631;3632;7482 8 TDILSLTSQNKTFDPKK DRANELAKTDILSLTS NKTFDPKKENPIVLLS K T D K K E 0 0 1 2 0 1 0 0 0 1 2 3 0 1 1 2 3 0 0 0 0 0 17 2 1935.0313 A0A0D9SEJ8;Q86YH2 A0A0D9SEJ8 262 278 ZNF280B Zinc finger protein 280B yes no 2 0.028305 62.646 By MS/MS By matching 1 1 9157100 4233200 4923900 6350 334 7242 16008;16009 15454 15454 591 1 TDKSSASAPDVDDPEAFPALA GRPNRGSRTDKSSASA PEAFPALA________ R T D L A - 5 0 0 4 0 0 1 0 0 0 1 1 0 1 3 3 1 0 0 1 0 0 21 1 2102.9644 Q8NC51 Q8NC51 388 408 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 7.4501E-11 135.36 By MS/MS By MS/MS 1 1 321010000 171720000 149290000 6351 2498 7243 16010;16011 15455;15456;15457 15457 5100;5101;5102;7730 3 TDLNPDNLQGGDDLDPNYVLSSR YKPSDEHKTDLNPDNL PNYVLSSRVRTGRSIR K T D S R V 0 1 3 5 0 1 0 2 0 0 4 0 0 0 2 2 1 0 1 1 0 0 23 0 2517.1619 P12277;G3V4N7;G3V461 P12277 108 130 CKB Creatine kinase B-type yes no 2;3 2.1925E-126 227.41 By MS/MS By MS/MS 2 2 79856000 28738000 51118000 6352 1687 7244 16012;16013;16014;16015 15458;15459;15460;15461;15462;15463;15464 15464 7 TDMDNQIVVSDYAQMDR QFCLSAPKTDMDNQIV SDYAQMDRVLREERAY K T D D R V 1 1 1 4 0 2 0 0 0 1 0 0 2 0 0 1 1 0 1 2 0 0 17 0 1999.8615 P50991 P50991 258 274 CCT4 T-complex protein 1 subunit delta yes yes 2 9.3485E-05 96.135 By MS/MS By MS/MS 1 2 30651000 12093000 18558000 6353 1872 7245;7246 16016;16017;16018 15465;15466 15466 729;730 8292 2 TDNMLSDQTPTPTR TLKFPSIKTDNMLSDQ DQTPTPTRFLKNCEEV K T D T R F 0 1 1 2 0 1 0 0 0 0 1 0 1 0 2 1 4 0 0 0 0 0 14 0 1575.7199 Q02930;H9KVC5 Q02930 51 64 CREB5 Cyclic AMP-responsive element-binding protein 5 yes no 2 0.025524 63.128 By matching By MS/MS 1 1 15659000 7576500 8082800 6354 1990 7247 16019;16020 15467 15467 788 1 TDNSVASSPSSAISTATPSPK IHPAVHTKTDNSVASS STATPSPKSTEQTTTN K T D P K S 3 0 1 1 0 0 0 0 0 1 0 1 0 0 3 7 3 0 0 1 0 0 21 0 2003.9647 H0Y6I7;H0Y5J3;F5H5V6;F5H6S1;F8W8R6;A0A087X0R0;O15550 H0Y6I7 409 429 KDM6A Lysine-specific demethylase 6A yes no 2 0.00026734 91.725 By MS/MS By MS/MS 3 3 34997000 17908000 17089000 6355 159 7248;7249 16021;16022;16023;16024;16025;16026 15468;15469;15470;15471;15472;15473 15471 258;259;260 6 TDQGILVTNQDACALASSVSSPVK LKQPGNGKTDQGILVT SSVSSPVKSKGKICLP K T D V K S 3 0 1 2 1 2 0 1 0 1 2 1 0 0 1 4 2 0 0 3 0 0 24 0 2460.2166 Q8IWI9;H3BP52;H3BTF4 Q8IWI9 36 59 MGA MAX gene-associated protein yes no 3 0.0013671 62.582 By matching By MS/MS 1 1 12954000 7482600 5471600 6356 2429 7250 16027;16028 15474 15474 4967;4968 1 TDSDSDLQLYK RAKQDFLKTDSDSDLQ DSDLQLYKEQGEGQGD K T D Y K E 0 0 0 3 0 1 0 0 0 0 2 1 0 0 0 2 1 0 1 0 0 0 11 0 1283.5881 H0Y360;Q01433;H0YCL9;E9PIJ1 H0Y360 159 169 AMPD2 AMP deaminase 2 yes no 2 0.00059436 111.31 By MS/MS By MS/MS 1 1 29924000 12786000 17138000 6357 1114 7251 16029;16030 15475;15476 15476 2103;7190 2 TDSDSDLQLYKEQGEGQGDR RAKQDFLKTDSDSDLQ QGEGQGDRSLRERDVL K T D D R S 0 1 0 4 0 3 2 3 0 0 2 1 0 0 0 2 1 0 1 0 0 0 20 1 2239.9829 H0Y360;Q01433;H0YCL9 H0Y360 159 178 AMPD2 AMP deaminase 2 yes no 3 0.029486 45.357 By MS/MS 1 4771600 0 4771600 6358 1114 7252 16031 15477 15477 2103;7190 1 TDSQSVRHSPIAPSSPSPQVLAQK FSTPTGSRTDSQSVRH SPQVLAQKYSLVAKQE R T D Q K Y 2 1 0 1 0 3 0 0 1 1 1 1 0 0 4 6 1 0 0 2 0 0 24 1 2516.2983 Q9NQS7 Q9NQS7 298 321 INCENP Inner centromere protein yes yes 3 0.00066794 70.028 By MS/MS By MS/MS 2 2 70370000 29972000 40398000 6359 2898 7253;7254 16032;16033;16034;16035 15478;15479;15480;15481;15482;15483 15481 6101;6102;6103;6104 6 TDSREDEISPPPPNPVVK NLQKAGTRTDSREDEI PPPNPVVKGRRRRGAI R T D V K G 0 1 1 2 0 0 2 0 0 1 0 1 0 0 5 2 1 0 0 2 0 0 18 1 1975.9851 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644 K7EMU2 75 92 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 2;3 0.00012105 114.37 By MS/MS By MS/MS 4 4 183450000 108930000 74521000 6360 1365 7255 16036;16037;16038;16039;16040;16041;16042;16043 15484;15485;15486;15487;15488;15489;15490;15491;15492;15493;15494;15495;15496 15493 2533;2534 13 TDSVIIADQTPTPTR TLKFGPARTDSVIIAD DQTPTPTRFLKNCEEV R T D T R F 1 1 0 2 0 1 0 0 0 2 0 0 0 0 2 1 4 0 0 1 0 0 15 0 1613.8261 K7ELQ4;P17544;K7ESA4 K7ELQ4 42 56 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes no 2;3 3.0232E-10 140.27 By MS/MS By MS/MS 2 2 9709300 5042500 4666800 6361 1383 7256;7257 16044;16045;16046;16047 15497;15498;15499 15499 7267;7268 3 TDTGIVTVEQSPSSSK LKMKDDSKTDTGIVTV EQSPSSSKLKVMQTDE K T D S K L 0 0 0 1 0 1 1 1 0 1 0 1 0 0 1 4 3 0 0 2 0 0 16 0 1634.7999 H0Y9Y2;Q8NFC6 Q8NFC6 2895 2910 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 no no 2 0.0024785 82.774 By MS/MS By matching 1 1 25651000 14915000 10735000 6362 2517;1155 7258 16048;16049 15500 15500 2193 1 TDVSNFDEEFTGEAPTLSPPR FVPTLSGRTDVSNFDE APTLSPPRDARPLTAA R T D P R D 1 1 1 2 0 0 3 1 0 0 1 0 0 2 3 2 3 0 0 1 0 0 21 0 2308.0495 Q16512 Q16512 899 919 PKN1 Serine/threonine-protein kinase N1 yes yes 2;3 7.6168E-35 164.27 By MS/MS By MS/MS 3 2 84513000 56452000 28061000 6363 2162 7259 16050;16051;16052;16053;16054 15501;15502;15503;15504;15505;15506;15507 15506 4300;7606 5 TDVSNFDEEFTGEAPTLSPPRDAR FVPTLSGRTDVSNFDE LSPPRDARPLTAAEQA R T D A R P 2 2 1 3 0 0 3 1 0 0 1 0 0 2 3 2 3 0 0 1 0 0 24 1 2650.2147 Q16512 Q16512 899 922 PKN1 Serine/threonine-protein kinase N1 yes yes 3 0.0084458 53.188 By MS/MS By matching 1 1 15211000 8789100 6421700 6364 2162 7260 16055;16056 15508 15508 4300;7606 1 TDYIPLLDVDEK VVGETVGKTDYIPLLD PLLDVDEKTGNSESKK K T D E K T 0 0 0 3 0 0 1 0 0 1 2 1 0 0 1 0 1 0 1 1 0 0 12 0 1419.7133 E7EVA0;P27816;H7C456;A0A0J9YW37;A0A0J9YVV8 E7EVA0 45 56 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 2.1949E-09 141.08 By MS/MS By MS/MS 1 1 19337000 9188900 10148000 6365 828 7261 16057;16058 15509;15510 15509 8122 2 TDYNASVSVPDSSGPER GKNIKALRTDYNASVS PDSSGPERILSISADI R T D E R I 1 1 1 2 0 0 1 1 0 0 0 0 0 0 2 4 1 0 1 2 0 0 17 0 1779.7911 P61978;Q5T6W2 P61978 70 86 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.00053788 133.04 By MS/MS 1 44345000 0 44345000 6366 1931 7262 16059 15511 15511 1 TEADVLAENQVLDSSAPKSPSQDVK EPEETPIKTEADVLAE KSPSQDVKATVRNFSE K T E V K A 3 0 1 3 0 2 2 0 0 0 2 2 0 0 2 4 1 0 0 3 0 0 25 1 2627.2926 Q9UHK0 Q9UHK0 385 409 NUFIP1 Nuclear fragile X mental retardation-interacting protein 1 yes yes 3 7.9388E-05 77.668 By MS/MS By MS/MS 1 1 13821000 4849900 8971500 6367 3005 7263 16060;16061 15512;15513 15512 6334 0 TEAPAPASSTPQEPWPGPTAPSPTSRPPWAVDPAFAER KKSSQVPRTEAPAPAS VDPAFAERYAPDKTST R T E E R Y 7 2 0 1 0 1 3 1 0 0 0 0 0 1 11 4 4 2 0 1 0 0 38 1 3952.902 Q9NR12 Q9NR12 196 233 PDLIM7 PDZ and LIM domain protein 7 yes yes 3 0.010765 42.339 By MS/MS By matching 1 1 37385000 16587000 20798000 6368 2904 7264 16062;16063 15514 15514 6116 1 TEAQDLCRASPEPPGPESSSR RAETTQARTEAQDLCR PGPESSSRWLDDLLAS R T E S R W 2 2 0 1 1 1 3 1 0 0 1 0 0 0 4 4 1 0 0 0 0 0 21 1 2270.0233 Q9C0C2 Q9C0C2 663 683 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 0.0038871 59.912 By MS/MS By MS/MS 1 1 148280000 79518000 68762000 6369 2791 7265 16064;16065 15515;15516 15515 5825 2 TEEARPSPAPGPGTPTGTPTR AAGADSPKTEEARPSP TPTGTPTRTPSRTAPG K T E T R T 2 2 0 0 0 0 2 3 0 0 0 0 0 0 6 1 5 0 0 0 0 0 21 1 2076.0236 Q4KMP7 Q4KMP7 135 155 TBC1D10B TBC1 domain family member 10B yes yes 3 0.00045937 79.663 By MS/MS By matching 1 1 66256000 38849000 27407000 6370 2195 7266 16066;16067 15517 15517 7620;7621 1 TEELIESPKLESSEGEIIQTVDR EHKDFTLKTEELIESP EIIQTVDRQSVKSPEV K T E D R Q 0 1 0 1 0 1 6 1 0 3 2 1 0 0 1 3 2 0 0 1 0 0 23 1 2601.3021 A0A0A0MTP7;F8VXG7;Q99590 A0A0A0MTP7 542 564 SCAF11 Protein SCAF11 yes no 3 3.4725E-18 146.34 By MS/MS By MS/MS 2 2 86932000 43724000 43208000 6371 277 7267;7268 16068;16069;16070;16071 15518;15519;15520;15521;15522 15521 490;491;492 5 TEEPLGSPHPSGTVESPGEGPQDTR EVLPAAQKTEEPLGSP GEGPQDTRIEGSVQLS K T E T R I 0 1 0 1 0 1 4 4 1 0 1 0 0 0 5 3 3 0 0 1 0 0 25 0 2560.1678 A0A0A0MR84;M0R202;A0A0B4J2G2;A0A087WUM8;Q9NWS9 A0A0A0MR84 131 155 ZNF446 Zinc finger protein 446 yes no 3 0.0027946 61.903 By MS/MS By MS/MS 2 2 46673000 21350000 25324000 6372 57 7269;7270 16072;16073;16074;16075 15523;15524;15525;15526 15526 99;100;6845 4 TEESPASDEAGEK PAENGETKTEESPASD ASDEAGEKEAKSD___ K T E E K E 2 0 0 1 0 0 4 1 0 0 0 1 0 0 1 2 1 0 0 0 0 0 13 0 1348.563 P05114;A6NL93;A6NEL0 P05114 83 95 HMGN1 Non-histone chromosomal protein HMG-14 yes no 2 0.00057243 95.428 By MS/MS By matching 1 1 4419200 2678000 1741200 6373 1638 7271 16076;16077 15527 15527 3093 0 TEFLHSQNSLSPR PGDLAEERTEFLHSQN SQNSLSPRSSLSDEAP R T E P R S 0 1 1 0 0 1 1 0 1 0 2 0 0 1 1 3 1 0 0 0 0 0 13 0 1514.7478 F6RY50;Q96FS4 F6RY50 727 739 SIPA1 Signal-induced proliferation-associated protein 1 yes no 2 0.015744 68.277 By MS/MS By matching 1 1 14699000 7908400 6790200 6374 991 7272 16078;16079 15528 15528 1864 1 TEFSPAAFEQEQLGSPQVR LAQDINIKTEFSPAAF QLGSPQVRAGSAGQTF K T E V R A 2 1 0 0 0 3 3 1 0 0 1 0 0 2 2 2 1 0 0 1 0 0 19 0 2120.0174 Q92585 Q92585 300 318 MAML1 Mastermind-like protein 1 yes yes 2;3 0.00010921 119.38 By matching By MS/MS 2 2 34922000 18116000 16806000 6375 2586 7273 16080;16081;16082;16083 15529;15530 15529 5314 2 TEGTPPPPGQPAK VAGIGWERTEGTPPPP PPPGQPAKGRVYFTYC R T E A K G 1 0 0 0 0 1 1 2 0 0 0 1 0 0 5 0 2 0 0 0 0 0 13 0 1275.6459 F8VWT9;J3KPF0;Q9Y4D8 F8VWT9 2365 2377 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes no 2 0.0118 80.318 By MS/MS By MS/MS 1 1 7348900 3849900 3499000 6376 1021 7274 16084;16085 15531;15532 15532 7155 0 TEGTYDLPYWDR HWRNRKKKTEGTYDLP YDLPYWDRAGWWKGMK K T E D R A 0 1 0 2 0 0 1 1 0 0 1 0 0 0 1 0 2 1 2 0 0 0 12 0 1514.6678 Q96PD2 Q96PD2 561 572 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 yes yes 2 2.1883E-09 141.1 By MS/MS By MS/MS 1 1 15538000 7696300 7842000 6377 2693 7275 16086;16087 15533;15534 15534 8432 2 TEIKEEEDQPSTSATQSSPAPGQSK EERSTELKTEIKEEED SPAPGQSKKKIFKPEE K T E S K K 2 0 0 1 0 3 4 1 0 1 0 2 0 0 3 5 3 0 0 0 0 0 25 1 2631.2148 Q09472 Q09472 1021 1045 EP300 Histone acetyltransferase p300 yes yes 3 0.019969 44.933 By MS/MS By matching 1 1 60485000 29604000 30881000 6378 2019 7276 16088;16089 15535 15535 3904 1 TEIMSPLYQDEAPK QTPPSCLKTEIMSPLY LYQDEAPKGTEASSGT K T E P K G 1 0 0 1 0 1 2 0 0 1 1 1 1 0 2 1 1 0 1 0 0 0 14 0 1620.7705 Q8IY81 Q8IY81 580 593 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 1.5421E-21 153.41 By MS/MS By MS/MS 3 3 286430000 135430000 151000000 6379 2438 7277;7278 16090;16091;16092;16093;16094;16095 15536;15537;15538;15539;15540 15538 986 4988 5 TENGTCPSPPQPLSPAAALGSGSAAAVPK PVRIQDIKTENGTCPS GSAAAVPKIESPDSSS K T E P K I 6 0 1 0 1 1 1 3 0 0 2 1 0 0 6 4 2 0 0 1 0 0 29 0 2732.3439 Q12948 Q12948 228 256 FOXC1 Forkhead box protein C1 yes yes 2;3 2.8095E-10 117.96 By MS/MS By MS/MS 4 4 235300000 120970000 114330000 6380 2035 7279;7280;7281 16096;16097;16098;16099;16100;16101;16102;16103 15541;15542;15543;15544;15545;15546;15547;15548;15549 15547 102;160 3998;3999;7544;7545 9 TENSLANENQQPIKSEPESEGEEPK ELNHEIQRTENSLANE ESEGEEPKRPPGICER R T E P K R 1 0 3 0 0 2 7 1 0 1 1 2 0 0 3 3 1 0 0 0 0 0 25 1 2783.2733 Q8NHM5;A0A0C4DGG3 Q8NHM5 961 985 KDM2B Lysine-specific demethylase 2B yes no 3 0.014535 46.808 By MS/MS By MS/MS 2 3 54490000 17802000 36688000 6381 2525 7282 16104;16105;16106;16107;16108 15550;15551;15552 15550 5156;5157;5158 3 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR AGPESEVRTEPAAEAE EAPGEQARDERSDSRA R T E A R D 11 1 0 0 0 2 9 4 1 0 1 0 0 0 10 5 1 0 0 1 0 0 46 0 4457.0531 P55884 P55884 68 113 EIF3B Eukaryotic translation initiation factor 3 subunit B yes yes 3;4 5.2365E-07 62.283 By MS/MS By MS/MS 1 2 536310000 313080000 223230000 6382 1915 7283 16109;16110;16111 15553;15554;15555;15556 15556 3706;3707;3708 4 TEPSANSLAIER KIADINLRTEPSANSL ANSLAIERFELEKKAL R T E E R F 2 1 1 0 0 0 2 0 0 1 1 0 0 0 1 2 1 0 0 0 0 0 12 0 1286.6466 A0A0A0MRD0;F5H4B4 A0A0A0MRD0 62 73 FAM227A Protein FAM227A yes no 1 0.02337 41.825 By MS/MS By matching 1 1 30246000 11070000 19177000 6383 209 7284 16112;16113 15557 15557 373;374 1 TEPSSPLSDPSDIIR PVTEVRIKTEPSSPLS SDPSDIIRVTVGDAAT K T E I R V 0 1 0 2 0 0 1 0 0 2 1 0 0 0 3 4 1 0 0 0 0 0 15 0 1612.7944 Q9ULJ3 Q9ULJ3 431 445 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2 0.0074304 75.02 By MS/MS 1 10740000 0 10740000 6384 3043 7285 16114 15558 15558 6412;6413 1 TESAYDWTSLSSSSIK NYQEALKRTESAYDWT SLSSSSIKSGSSSSSI R T E I K S 1 0 0 1 0 0 1 0 0 1 1 1 0 0 0 6 2 1 1 0 0 0 16 0 1760.8105 C9K0J5;Q70E73;C9J164 C9K0J5 572 587 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 2 2.6411E-42 180.09 By MS/MS By MS/MS 1 1 52866000 26087000 26780000 6385 707 7286 16115;16116 15559;15560 15559 8111 2 TESEVPPRPASPK ASAATKERTESEVPPR PPRPASPKVTRSPPET R T E P K V 1 1 0 0 0 0 2 0 0 0 0 1 0 0 4 2 1 0 0 1 0 0 13 1 1393.7201 Q9Y3L3 Q9Y3L3 534 546 SH3BP1 SH3 domain-binding protein 1 yes yes 2 0.0056645 85.457 By MS/MS By MS/MS 1 1 11017000 7033700 3983500 6386 3109 7287 16117;16118 15561;15562 15562 6667 2 TESIEEHATPNSSPAQWPGVSSLINLLSSAQDEDQPK LSDRRRLRTESIEEHA AQDEDQPKLNILLCEA R T E P K L 3 0 2 2 0 3 4 1 1 2 3 1 0 0 4 7 2 1 0 1 0 0 37 0 3961.8817 Q8TDJ6;H0YLM8 Q8TDJ6 2303 2339 DMXL2 DmX-like protein 2 yes no 3 0.031778 40.112 By MS/MS 1 0 0 0 6387 2540 7288 16119 15563 15563 1 TESLIQQYEAISLLNSERYARLER QKTVLQEKTESLIQQY ERYARLERAQVLVNQF K T E E R A 2 3 1 0 0 2 4 0 0 2 4 0 0 0 0 3 1 0 2 0 0 0 24 2 2881.4934 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 2800 2823 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 3 0.030442 40.012 By MS/MS By matching 1 1 12077000 8007000 4069800 6388 1115 7289 16120;16121 15564 15564 0 TESLVIPSTR PPSGRITKTESLVIPS SLVIPSTRSEGKQAGR K T E T R S 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 2 2 0 0 1 0 0 10 0 1101.603 F8VW41;Q86VP3 F8VW41 384 393 PACS2 Phosphofurin acidic cluster sorting protein 2 yes no 2 0.014134 69.864 By MS/MS By MS/MS 1 1 14277000 7417800 6859500 6389 1017 7290 16122;16123 15565;15566 15565 1904 2 TESPATAAETASEELDNR EPEPPSGRTESPATAA ASEELDNRSLEEILNS R T E N R S 4 1 1 1 0 0 4 0 0 0 1 0 0 0 1 2 3 0 0 0 0 0 18 0 1890.8443 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3 C9JWF0 39 56 SMC4 Structural maintenance of chromosomes protein 4 yes no 2;3 2.2364E-107 224.36 By MS/MS By MS/MS 2 2 440040000 223030000 217000000 6390 616 7291 16124;16125;16126;16127 15567;15568;15569;15570;15571;15572;15573;15574 15574 1123 8 TESVSDKEDKPPLAPSGGTEGPEQPPPPCPSQTGSPPVGLIK MGSPVSSKTESVSDKE SPPVGLIKGEDKDEGP K T E I K G 1 0 0 2 1 2 4 5 0 1 2 3 0 0 11 5 3 0 0 2 0 0 42 2 4264.0845 Q8WWM7;H3BUF6 Q8WWM7 600 641 ATXN2L Ataxin-2-like protein yes no 4 0.00010472 59.401 By MS/MS 1 17419000 17419000 0 6391 2564 7292 16128 15575 15575 5248 1 TETISFGSVSPGGVK HFESSTVKTETISFGS SVSPGGVKLEISTKEV K T E V K L 0 0 0 0 0 0 1 3 0 1 0 1 0 1 1 3 2 0 0 2 0 0 15 0 1464.746 A8K968;A0A0A0MRA8;A0A0A0MSA4;Q9Y2J2;A0A0J9YY18;J3QS83 A8K968 622 636 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 2 0.00051679 99.238 By MS/MS By MS/MS 1 1 34985000 21624000 13361000 6392 205 7293 16129;16130 15576;15577;15578 15576 366 3 TETPPPLASLNVSK EVEIINDRTETPPPLA LASLNVSKLASKARTE R T E S K L 1 0 1 0 0 0 1 0 0 0 2 1 0 0 3 2 2 0 0 1 0 0 14 0 1452.7824 K7ELG9;Q3MHD2 K7ELG9 73 86 LSM12 Protein LSM12 homolog yes no 2 1.2275E-10 140.77 By MS/MS By MS/MS 2 1 159740000 89088000 70649000 6393 1381 7294 16131;16132;16133 15579;15580;15581;15582;15583 15580 7265 4 TEVALAKDMESPTKLDVTLAK KDMALATKTEVALAKD KLDVTLAKDMQPSMES K T E A K D 3 0 0 2 0 0 2 0 0 0 3 3 1 0 1 1 3 0 0 2 0 0 21 2 2259.2032 E7EVA0;P27816;H7C456 E7EVA0 287 307 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.00015679 99.413 By MS/MS By MS/MS 1 1 132150000 58473000 73675000 6394 828 7295 16134;16135 15584;15585 15585 311 1531;7092 2 TEVLSPNSKVESK STVTNEVKTEVLSPNS PNSKVESKCETEKNDE K T E S K C 0 0 1 0 0 0 2 0 0 0 1 2 0 0 1 3 1 0 0 2 0 0 13 1 1416.746 Q8NEZ4;H7BY37 Q8NEZ4 2824 2836 KMT2C Histone-lysine N-methyltransferase 2C yes no 2 0.0018031 95.854 By MS/MS By MS/MS 1 1 11715000 6341200 5373900 6395 2515 7296 16136;16137 15586;15587 15587 5136 2 TEVSETARPSSPDTR RFHSNVLKTEVSETAR RPSSPDTRVPRGTELS K T E T R V 1 2 0 1 0 0 2 0 0 0 0 0 0 0 2 3 3 0 0 1 0 0 15 1 1631.7751 O75132 O75132 614 628 ZBED4 Zinc finger BED domain-containing protein 4 yes yes 3 0.010049 59.502 By matching By MS/MS 1 1 12470000 7133200 5336900 6396 1535 7297 16138;16139 15588 15588 2897;2898 1 TEWLDGK QFFICTAKTEWLDGKH KTEWLDGKHVVFGKVK K T E G K H 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 0 0 7 0 847.40758 P62937;P0DN26;A0A0H2UH34;A0A0B4J2A2;A0A075B767;A0A075B759;Q9Y536;F5H284;P0DN37 P62937 119 125 PPIA;PPIAL4C;PPIAL4E;PPIAL4A;PPIAL4D Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 1 0.02996 62.659 By MS/MS By matching 1 1 7266800 2982800 4284000 6397 1950 7298 16140;16141 15589 15589 0 TFCGTPDYIAPEIIAYQPYGK MMDGVTTRTFCGTPDY IAYQPYGKSVDWWAYG R T F G K S 2 0 0 1 1 1 1 2 0 3 0 1 0 1 3 0 2 0 3 0 0 0 21 0 2403.1457 P17252;P05771;P05129 P17252 497 517 PRKCA;PRKCB;PRKCG Protein kinase C alpha type;Protein kinase C beta type;Protein kinase C gamma type yes no 2;3 2.2405E-73 191.41 By MS/MS By MS/MS 2 2 121940000 75570000 46366000 6398 1714 7299 16142;16143;16144;16145 15590;15591;15592;15593 15592 7401;7402 4 TFCPPPLPKPSSTTPTPLVSETGGNSPSDKVDNELK RPGTQMVRTFCPPPLP DKVDNELKNLEHLSSF R T F L K N 0 0 2 2 1 0 2 2 0 0 3 3 0 1 8 5 5 0 0 2 0 0 36 2 3793.872 Q2KHR3;H0YCQ7 Q2KHR3 1186 1221 QSER1 Glutamine and serine-rich protein 1 yes no 3 0.012159 49.567 By MS/MS 1 13112000 0 13112000 6399 2176 7300 16146 15594 15594 4325 1 TFCQLILDPIFK PEGKKLPRTFCQLILD LILDPIFKVFDAIMNF R T F F K V 0 0 0 1 1 1 0 0 0 2 2 1 0 2 1 0 1 0 0 0 0 0 12 0 1493.7952 P13639 P13639 288 299 EEF2 Elongation factor 2 yes yes 2 1.5575E-10 146.71 By MS/MS By MS/MS 1 1 13102000 6907100 6195300 6400 1693 7301 16147;16148 15595;15596 15595 2 TFDSIVMDPK PVKVVVGKTFDSIVMD DSIVMDPKKDVLIEFY K T F P K K 0 0 0 2 0 0 0 0 0 1 0 1 1 1 1 1 1 0 0 1 0 0 10 0 1151.5533 P13667 P13667 534 543 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.026248 73.985 By MS/MS 1 1939200 1939200 0 6401 1694 7302 16149 15597 15597 633 1 TFIAIKPDGVQR GTMANCERTFIAIKPD IKPDGVQRGLVGEIIK R T F Q R G 1 1 0 1 0 1 0 1 0 2 0 1 0 1 1 0 1 0 0 1 0 0 12 1 1343.7561 Q32Q12;P22392;E7ERL0;J3KPD9;P15531;C9K028;F6XY72;E5RHP0 Q32Q12 32 43 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A yes no 3 0.007791 73.435 By MS/MS By MS/MS 1 1 13786000 7752900 6033100 6402 1748 7303 16150;16151 15598;15599 15598 0 TFLDKDAQRLSPIPEEVPK EKLEKSKKTFLDKDAQ PIPEEVPKSTLESEKP K T F P K S 1 1 0 2 0 1 2 0 0 1 2 2 0 1 3 1 1 0 0 1 0 0 19 2 2182.1634 Q96T23;H0YER1;H0YCN2 Q96T23 594 612 RSF1 Remodeling and spacing factor 1 yes no 3 0.001532 84.653 By MS/MS By MS/MS 1 1 123710000 67283000 56423000 6403 2714 7304 16152;16153 15600;15601 15600 5615 2 TFLEGDWTSPSK LLYSDRDRTFLEGDWT GDWTSPSKSSDRRNSL R T F S K S 0 0 0 1 0 0 1 1 0 0 1 1 0 1 1 2 2 1 0 0 0 0 12 0 1366.6405 Q8NDT2 Q8NDT2 544 555 RBM15B Putative RNA-binding protein 15B yes yes 2 6.2336E-11 147.7 By matching By MS/MS 1 1 134130000 73679000 60454000 6404 2510 7305 16154;16155 15602 15602 5130 1 TFLESKEELSHSPEPCTK KVESTSPKTFLESKEE HSPEPCTKMTMRLRRN K T F T K M 0 0 0 0 1 0 4 0 1 0 2 2 0 1 2 3 2 0 0 0 0 0 18 1 2117.9939 P41229 P41229 290 307 KDM5C Lysine-specific demethylase 5C yes yes 3 0.0027458 67.902 By MS/MS By MS/MS 1 1 36499000 19422000 17077000 6405 1820 7306 16156;16157 15603;15604 15603 3427;3428 2 TFNSPNLK SNKINEMKTFNSPNLK TFNSPNLKDGRFVNPS K T F L K D 0 0 2 0 0 0 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 8 0 919.47633 A0A0A0MSX4;Q9Y6N7;A0A087WZ85;A0A087WTM1 A0A0A0MSX4 932 939 ROBO1 Roundabout homolog 1 yes no 2 0.026067 67.113 By MS/MS By matching 1 1 10233000 6009200 4223300 6406 262 7307 16158;16159 15605 15605 455 1 TFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIK EEKKSLKRTFQQIQEE LLTEELIKALQDLENA R T F I K A 1 0 0 4 0 4 5 2 0 2 3 1 0 1 4 3 2 0 2 0 0 0 34 0 3838.7585 Q9NQG5;A2A2M0 Q9NQG5 149 182 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 3 4.6062E-09 79.886 By MS/MS By MS/MS 1 1 369950000 149590000 220350000 6407 2894 7308 16160;16161 15606;15607 15606 6093;6094 2 TFSATVR PLPTRRTRTFSATVRA RTFSATVRASQGPVYK R T F V R A 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 2 0 0 1 0 0 7 0 780.413 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 50 56 CARHSP1 Calcium-regulated heat stable protein 1 yes no 2 0.029226 75.043 By MS/MS By MS/MS 1 1 961840000 531860000 429980000 6408 1236 7309 16162;16163 15608;15609 15608 2 TFSDESNVL SVRPLLLRTFSDESNV FSDESNVL________ R T F V L - 0 0 1 1 0 0 1 0 0 0 1 0 0 1 0 2 1 0 0 1 0 0 9 0 1010.4557 Q8NB49;H7C113 Q8NB49 1124 1132 ATP11C Phospholipid-transporting ATPase IG yes no 2 6.8026E-10 163.38 By MS/MS By MS/MS 1 1 29136000 15026000 14110000 6409 2494 7310 16164;16165 15610;15611 15611 5091 2 TFSEPGDHPGMLTSGK SNGRSYKRTFSEPGDH PGMLTSGKRSHLESSS R T F G K R 0 0 0 1 0 0 1 3 1 0 1 1 1 1 2 2 2 0 0 0 0 0 16 0 1659.7563 Q9HA47 Q9HA47 251 266 UCK1 Uridine-cytidine kinase 1 yes yes 2 0.0019613 86.777 By MS/MS By matching 2 1 35607000 24231000 11376000 6410 2859 7311;7312 16166;16167;16168 15612;15613 15613 1134 6023 2 TFSLDAVPPDHSPR PLPWGRPRTFSLDAVP VPPDHSPRARSVAPLP R T F P R A 1 1 0 2 0 0 0 0 1 0 1 0 0 1 3 2 1 0 0 1 0 0 14 0 1537.7525 Q9BST9 Q9BST9 518 531 RTKN Rhotekin yes yes 2 9.0182E-07 126.71 By MS/MS By MS/MS 1 1 19157000 12011000 7145600 6411 2746 7313 16169;16170 15614;15615 15614 5705 2 TFSLTEVR PPPKLRRRTFSLTEVR TFSLTEVRGQVSESED R T F V R G 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 8 0 951.50255 O95239 O95239 799 806 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.0097198 94.409 By MS/MS 1 112790000 0 112790000 6412 1585 7314 16171 15616 15616 3004 1 TFSSSPPKPGDIFEVELAK TSNKMNFKTFSSSPPK IFEVELAKNDNSLGIS K T F A K N 1 0 0 1 0 0 2 1 0 1 1 2 0 2 3 3 1 0 0 1 0 0 19 1 2048.0466 Q12923 Q12923 1355 1373 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 3 0.013681 53.21 By MS/MS 1 10988000 10988000 0 6413 2034 7315 16172 15617 15617 3989;3990 1 TFSVYSSSR QSSDSSKRTFSVYSSS FSVYSSSRQQGRYAPS R T F S R Q 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 4 1 0 1 1 0 0 9 0 1032.4876 H0YCB7;H0YEE1;Q9UID3 H0YCB7 21 29 VPS51 Vacuolar protein sorting-associated protein 51 homolog yes no 2 0.0082484 80.834 By MS/MS By MS/MS 1 1 7494100 4508000 2986000 6414 1168 7316 16173;16174 15618;15619 15618 2214 2 TFVLTPELSPGK LPIQKGEKTFVLTPEL TPELSPGKLQVLPFEK K T F G K L 0 0 0 0 0 0 1 1 0 0 2 1 0 1 2 1 2 0 0 1 0 0 12 0 1287.7075 Q96DY7 Q96DY7 631 642 MTBP Mdm2-binding protein yes yes 2 0.00086614 99.161 By MS/MS By MS/MS 1 1 4783600 2339000 2444600 6415 2639 7317 16175;16176 15620;15621 15621 5436 2 TFVNITPAEVGVLVGK VWAAVPGKTFVNITPA EVGVLVGKDRSSFYVN K T F G K D 1 0 1 0 0 0 1 2 0 1 1 1 0 1 1 0 2 0 0 4 0 0 16 0 1642.9294 P07737;I3L3D5 P07737 39 54 PFN1 Profilin-1 yes no 2 0.00049441 112.44 By MS/MS 1 3827100 0 3827100 6416 1654 7318 16177 15622 15622 1 TFWSPELK SSSMNSIKTFWSPELK TFWSPELKKERALRKD K T F L K K 0 0 0 0 0 0 1 0 0 0 1 1 0 1 1 1 1 1 0 0 0 0 8 0 1006.5124 K7EPP6;A0A0U1RQM4;X6RM00;G8JLD3;X6RLX0;O15083;Q8IUD2 K7EPP6 37 44 ERC1;ERC2 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 yes no 2 0.01488 78.098 By MS/MS By MS/MS 1 1 18520000 9401700 9118000 6417 386 7319 16178;16179 15623;15624 15623 711 2 TFWSPELKK SSSMNSIKTFWSPELK FWSPELKKERALRKDE K T F K K E 0 0 0 0 0 0 1 0 0 0 1 2 0 1 1 1 1 1 0 0 0 0 9 1 1134.6073 K7EPP6;A0A0U1RQM4;X6RM00;G8JLD3;X6RLX0;O15083;Q8IUD2 K7EPP6 37 45 ERC1;ERC2 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 yes no 2 0.0027586 111.86 By MS/MS By MS/MS 1 1 28863000 15435000 13429000 6418 386 7320 16180;16181 15625;15626 15625 711 2 TGAAPIIDVVR RVNAAKNKTGAAPIID APIIDVVRSGYYKVLG K T G V R S 2 1 0 1 0 0 0 1 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1110.6397 E9PJD9;E9PLL6;P46776;E9PLX7 E9PJD9 38 48 RPL27A 60S ribosomal protein L27a yes no 2 0.016038 77.379 By MS/MS By MS/MS 1 1 15150000 8445400 6704800 6419 889 7321 16182;16183 15627;15628;15629 15628 3 TGAIVDVPVGEELLGR KEGDIVKRTGAIVDVP VGEELLGRVVDALGNA R T G G R V 1 1 0 1 0 0 2 3 0 1 2 0 0 0 1 0 1 0 0 3 0 0 16 0 1623.8832 P25705;K7EK77;K7ERX7;K7EQH4;K7EJP1 P25705 134 149 ATP5A1 ATP synthase subunit alpha, mitochondrial yes no 2 2.8416E-10 141.58 By MS/MS By MS/MS 1 1 17998000 9446900 8551100 6420 1764 7322 16184;16185 15630;15631 15630 2 TGDLGIPPNPEDRSPSPEPIYNSEGK EDLTRKLRTGDLGIPP PIYNSEGKRLNTREFR R T G G K R 0 1 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 26 1 2765.3144 Q15637 Q15637 67 92 SF1 Splicing factor 1 yes yes 3 5.9388E-07 90.71 By MS/MS By MS/MS 2 4 1496200000 642440000 853760000 6421 2147 7323 16186;16187;16188;16189;16190;16191 15632;15633;15634;15635;15636;15637;15638;15639;15640;15641;15642;15643;15644;15645;15646;15647;15648;15649;15650;15651 15640 4258;4259;4260 20 TGDLGIPPNPEDRSPSPEPIYNSEGKR EDLTRKLRTGDLGIPP IYNSEGKRLNTREFRT R T G K R L 0 2 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 27 2 2921.4155 Q15637 Q15637 67 93 SF1 Splicing factor 1 yes yes 3;4 4.5018E-07 92.565 By MS/MS By MS/MS 6 7 1012300000 517990000 494310000 6422 2147 7324 16192;16193;16194;16195;16196;16197;16198;16199;16200;16201;16202;16203;16204 15652;15653;15654;15655;15656;15657;15658;15659;15660;15661;15662;15663;15664;15665;15666;15667;15668;15669;15670;15671;15672;15673;15674;15675 15658 4258;4259;4260 22 TGEDEDEEDNDALLKENESPDVR PPPSEEIKTGEDEDEE ENESPDVRRDKPVTGE K T G V R R 1 1 2 5 0 0 6 1 0 0 2 1 0 0 1 1 1 0 0 1 0 0 23 1 2618.1104 A0A087WWS1;Q96FV9 A0A087WWS1 542 564 THOC1 THO complex subunit 1 yes no 3 7.6934E-05 84.975 By MS/MS By matching 1 1 26543000 13269000 13274000 6423 98 7325 16205;16206 15676 15676 178 1 TGHILHPEYLQPLPSTPVSPIELDAK VLKMLTARTGHILHPE SPIELDAKKSPLALLA R T G A K K 1 0 0 1 0 1 2 1 2 2 4 1 0 0 5 2 2 0 1 1 0 0 26 0 2851.512 Q96F45 Q96F45 84 109 ZNF503 Zinc finger protein 503 yes yes 3;4 6.3864E-10 127.76 By MS/MS By MS/MS 4 4 589930000 268830000 321100000 6424 2646 7326;7327 16207;16208;16209;16210;16211;16212;16213;16214 15677;15678;15679;15680;15681;15682;15683;15684;15685;15686;15687;15688 15683 5458;5459;7788 12 TGISDVFAK NKSAPELKTGISDVFA GISDVFAKNDLAVVDV K T G A K N 1 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 1 0 0 1 0 0 9 0 936.49165 P19338 P19338 325 333 NCL Nucleolin yes yes 2 0.0087875 107.01 By MS/MS By MS/MS 1 1 19214000 9041200 10172000 6425 1732 7328 16215;16216 15689;15690 15689 2 TGKNSCYENISELK MADISDKRTGKNSCYE YENISELKYSDDLSSP R T G L K Y 0 0 2 0 1 0 2 1 0 1 1 2 0 0 0 2 1 0 1 0 0 0 14 1 1641.7668 Q9P2G4 Q9P2G4 686 699 MAP10 Microtubule-associated protein 10 yes yes 2 0.01391 67.726 By MS/MS 1 0 0 0 6426 2982 7329 16217 15691 15691 6278;8487 1 TGLSLWDTSPSYIDK SSSQPEPRTGLSLWDT TSPSYIDKLVQGISFS R T G D K L 0 0 0 2 0 0 0 1 0 1 2 1 0 0 1 3 2 1 1 0 0 0 15 0 1681.8199 E7EPP6;O14757;J3KN87 E7EPP6 339 353 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 9.7604E-16 148.18 By MS/MS 1 7167500 0 7167500 6427 803 7330 16218 15692 15692 1434 1 TGPPPISPSK ASALSSHRTGPPPISP PPPISPSKRKFSMEPG R T G S K R 0 0 0 0 0 0 0 1 0 1 0 1 0 0 4 2 1 0 0 0 0 0 10 0 979.53385 F8W708;E7ERW0;E7EQU6;E7EWF5;A0A075B6E4;A0A0A6YYI5;G5E9M7;Q14135;A0A096LP98;E7EUJ2;F8WBN7 F8W708 46 55 VGLL4 Transcription cofactor vestigial-like protein 4 yes no 2 0.017193 67.252 By MS/MS By MS/MS 1 1 16114000 8914500 7199500 6428 8 7331 16219;16220 15693;15694 15693 12;13 2 TGQAGSLSGSPKPFSPQLSAPITTK TASPASTKTGQAGSLS LSAPITTKTDKTSTTG K T G T K T 2 0 0 0 0 2 0 3 0 1 2 2 0 1 4 5 3 0 0 0 0 0 25 1 2456.2911 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 408 432 ZMYND8 Protein kinase C-binding protein 1 yes no 3 2.431E-06 107.07 By MS/MS By MS/MS 2 2 127090000 81220000 45868000 6429 82 7332;7333 16221;16222;16223;16224 15695;15696;15697;15698 15695 144;145;146;147 4 TGQLEGAPAPGPAASPQTLDHSGATATGGASELK LHRGVHGKTGQLEGAP TGGASELKTPASSTAP K T G L K T 7 0 0 1 0 2 2 6 1 0 3 1 0 0 4 3 4 0 0 0 0 0 34 0 3144.5323 P55317 P55317 317 350 FOXA1 Hepatocyte nuclear factor 3-alpha yes yes 3 0.0065261 47.006 By MS/MS 1 7244600 0 7244600 6430 1914 7334 16225 15699 15699 3703 1 TGRDTPENGETAIGAENSEK STSRSSSKTGRDTPEN IGAENSEKIDENSDKE K T G E K I 2 1 2 1 0 0 4 3 0 1 0 1 0 0 1 1 3 0 0 0 0 0 20 1 2074.9403 Q8N3X1 Q8N3X1 475 494 FNBP4 Formin-binding protein 4 yes yes 3 0.00047641 84.66 By matching By MS/MS 1 1 23550000 10376000 13174000 6431 2469 7335 16226;16227 15700 15700 7721 1 TGSCSELDACPSK KNSKSLCRTGSCSELD ELDACPSKISQPARGF R T G S K I 1 0 0 1 2 0 1 1 0 0 1 1 0 0 1 3 1 0 0 0 0 0 13 0 1410.5755 H0Y9Z7;A0A1B0GUA8;Q9H1H9 H0Y9Z7 700 712 KIF13A Kinesin-like protein KIF13A yes no 2 0.020749 65.038 By matching By MS/MS 1 1 19408000 11345000 8062800 6432 417 7336 16228;16229 15701 15701 778 1 TGSDFSMFEALR KSRVKNIKTGSDFSMF FSMFEALRDTIYSEVA K T G L R D 1 1 0 1 0 0 1 1 0 0 1 0 1 2 0 2 1 0 0 0 0 0 12 0 1359.6129 A6NNN6 A6NNN6 1317 1328 PCM1 yes yes 2 0.00030894 96.734 By MS/MS By MS/MS 1 1 12948000 6819900 6128300 6433 484 7337 16230;16231 15702;15703;15704 15703 186 877 3 TGSDHTNPTSPLLVKPSDLLEENK MQEMELKRTGSDHTNP SDLLEENKINSSVKFA R T G N K I 0 0 2 2 0 0 2 1 1 0 4 2 0 0 3 3 3 0 0 1 0 0 24 1 2591.3079 Q96D71;E9PMG1;H0YDT0;H0YE73 Q96D71 473 496 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 3 3.4811E-05 82.56 By MS/MS By MS/MS 1 1 32817000 15465000 17352000 6434 2635 7338 16232;16233 15705;15706 15705 5424;7780 2 TGSDHTNPTSPLLVKPSDLLEENKINSSVK MQEMELKRTGSDHTNP NKINSSVKFASGNTVA R T G V K F 0 0 3 2 0 0 2 1 1 1 4 3 0 0 3 5 3 0 0 2 0 0 30 2 3219.6623 Q96D71;E9PMG1;H0YDT0;H0YE73 Q96D71 473 502 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 4 6.8907E-10 90.836 By MS/MS By MS/MS 1 1 36004000 20052000 15952000 6435 2635 7339 16234;16235 15707;15708 15707 5424;7780 2 TGSESSQTGTSTTSSR TQERERSRTGSESSQT GTSTTSSRSKSDQDAR R T G S R S 0 1 0 0 0 1 1 2 0 0 0 0 0 0 0 6 5 0 0 0 0 0 16 0 1572.6863 E7EX17;P23588 E7EX17 420 435 EIF4B Eukaryotic translation initiation factor 4B yes no 2 1.0244E-06 123.63 By MS/MS By MS/MS 2 1 123550000 0 123550000 6436 837 7340 16236;16237;16238 15709;15710;15711 15709 1564;7099 2 TGSGSPFAGNSPAR GTVKQTPKTGSGSPFA FAGNSPAREGEQDAAS K T G A R E 2 1 1 0 0 0 0 3 0 0 0 0 0 1 2 3 1 0 0 0 0 0 14 0 1304.6109 Q9UPT8;M0QY97 Q9UPT8 1265 1278 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 2 0.0022324 83.894 By MS/MS By MS/MS 2 2 125960000 67413000 58548000 6437 3068 7341;7342 16239;16240;16241;16242 15712;15713;15714 15712 6488;6489;6490 2 TGSGSPFAGNSPAREGEQDAASLK GTVKQTPKTGSGSPFA EQDAASLKDVFKGFDP K T G L K D 4 1 1 1 0 1 2 4 0 0 1 1 0 1 2 4 1 0 0 0 0 0 24 1 2333.0884 Q9UPT8;M0QY97 Q9UPT8 1265 1288 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 3 0.0056879 52.463 By MS/MS By MS/MS 1 2 71055000 25982000 45073000 6438 3068 7343;7344 16243;16244;16245 15715;15716 15715 6488;6489;6490 2 TGSPGDAPERPPLCDFSEGLSAPMDFYR EPPDQSFRTGSPGDAP SAPMDFYRFTVESPST R T G Y R F 2 2 0 3 1 0 2 3 0 0 2 0 1 2 5 3 1 0 1 0 0 0 28 1 3068.3644 Q5VVD7;Q8IWE5 Q5VVD7 419 446 PLEKHM2 Pleckstrin homology domain-containing family M member 2 yes no 3 0.017532 48.085 By matching By MS/MS 1 1 16927000 5883300 11044000 6439 2272 7345 16246;16247 15717 15717 912 4563 1 TGSPGPELLFHEGQQK CGAYIYTKTGSPGPEL LFHEGQQKRFCNTTCL K T G Q K R 0 0 0 0 0 2 2 3 1 0 2 1 0 1 2 1 1 0 0 0 0 0 16 0 1723.8529 A6NL54;A6NHN7;A6NHB5;Q14202 A6NL54 464 479 ZMYM3 Zinc finger MYM-type protein 3 yes no 3 0.008798 72.209 By MS/MS By MS/MS 1 1 17294000 9741100 7552600 6440 468 7346 16248;16249 15718;15719 15718 863 0 TGSPGSEVVTLQQFLEESNK ESRHHKIKTGSPGSEV QFLEESNKLTSVQIKS K T G N K L 0 0 1 0 0 2 3 2 0 0 2 1 0 1 1 3 2 0 0 2 0 0 20 0 2149.0539 H0Y7K3;H0Y470;H7C2C6;Q3V6T2;H0Y7U8 H0Y7K3 176 195 CCDC88A Girdin yes no 2;3 3.3706E-05 125.23 By MS/MS By MS/MS 1 2 34681000 19186000 15495000 6441 1119 7347 16250;16251;16252 15720;15721;15722 15720 2127;7193 3 TGSPSSSASACSPGGMLSSAGGAPEGK TCQPFTPRTGSPSSSA AGGAPEGKDDKKDTDV R T G G K D 4 0 0 0 1 0 1 6 0 0 1 1 1 0 3 8 1 0 0 0 0 0 27 0 2394.0428 Q96F45 Q96F45 226 252 ZNF503 Zinc finger protein 503 yes yes 2;3 1.2877E-06 86.987 By MS/MS By MS/MS 5 5 297040000 141570000 155470000 6442 2646 7348;7349;7350 16253;16254;16255;16256;16257;16258;16259;16260;16261;16262 15723;15724;15725;15726;15727;15728;15729;15730;15731;15732;15733;15734 15724 1055 5460;5461;5462;5463;5464;7789 12 TGSPTFVR THKGKPVKTGSPTFVR TGSPTFVRELRSRTFD K T G V R E 0 1 0 0 0 0 0 1 0 0 0 0 0 1 1 1 2 0 0 1 0 0 8 0 863.45012 Q9UPP1;B0QZZ4;Q5JPR8;B0QZZ2;B0QZZ3;B0QZE1 Q9UPP1 118 125 PHF8 Histone lysine demethylase PHF8 yes no 2 0.019425 73.841 By MS/MS By matching 1 1 24996000 12648000 12348000 6443 3066 7351 16263;16264 15735 15735 6481 1 TGSSPNSVSSSPTNSAITQLR GRMRNNIKTGSSPNSV NSAITQLRNKLENGKP K T G L R N 1 1 2 0 0 1 0 1 0 1 1 0 0 0 2 7 3 0 0 1 0 0 21 0 2090.024 A0A1B0GWI0;A0A1B0GVV8;A0JP08;A0A1B0GV02;O60315;U3KQ51;E7ESP8;E7EUW9;A0A1B0GW50 A0A1B0GWI0 91 111 ZEB2 Zinc finger E-box-binding homeobox 2 yes no 2 0.00050277 86.748 By matching By MS/MS 2 2 19171000 10295000 8875900 6444 425 7352 16265;16266;16267;16268 15736;15737 15736 797;798 2 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK GGFMAQGKTGSSSPPG SLQSDLNKLGVATVAK K T G N K L 0 0 1 2 0 2 0 5 0 0 4 2 1 0 5 7 1 0 0 0 0 0 30 1 2938.4342 F5GZ78;A0A1B0GTU4;P49023 F5GZ78 316 345 PXN Paxillin yes no 3 4.1446E-05 73.292 By MS/MS By MS/MS 2 2 70712000 28175000 42537000 6445 414 7353;7354 16269;16270;16271;16272 15738;15739;15740 15740 163 768;769;770 3 TGSTSSKEDDYESDAATIVQK VGSAQQVRTGSTSSKE DAATIVQKCLEIYDMI R T G Q K C 2 0 0 3 0 1 2 1 0 1 0 2 0 0 0 4 3 0 1 1 0 0 21 1 2231.0077 Q5T4S7 Q5T4S7 360 380 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 3 3.6774E-05 96.052 By matching By MS/MS 1 1 34011000 17088000 16923000 6446 2240 7355 16273;16274 15741;15742 15742 4492 2 TGSVGIGNLQR GSQTALYRTGSVGIGN VGIGNLQRTSSQRSTL R T G Q R T 0 1 1 0 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1100.5938 Q99569 Q99569 445 455 PKP4 Plakophilin-4 yes yes 2 0.0045684 82.494 By MS/MS By MS/MS 1 1 51385000 26239000 25146000 6447 2726 7356 16275;16276 15743;15744 15744 5659 2 TGSYGALAEITASK TWRLGLRKTGSYGALA LAEITASKEGQKEKDT K T G S K E 3 0 0 0 0 0 1 2 0 1 1 1 0 0 0 2 2 0 1 0 0 0 14 0 1367.6933 O14974;F8VZN8;H0YIS4;H0YHI8 O14974 443 456 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.0047483 91.592 By matching By MS/MS 1 1 8803500 4653100 4150400 6448 1463 7357 16277;16278 15745 15745 2720 0 TGTLQPWNSDSTLNSR YWTRSRRKTGTLQPWN SDSTLNSRQLEPRTET K T G S R Q 0 1 2 1 0 1 0 1 0 0 2 0 0 0 1 3 3 1 0 0 0 0 16 0 1775.8438 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 249 264 RACGAP1 Rac GTPase-activating protein 1 yes no 2 0.0010818 92.906 By MS/MS By MS/MS 1 1 16572000 8768000 7803500 6449 2803 7358 16279;16280 15746;15747 15747 5865;5866 2 TGTYILIDMVLNRMAKGVK HCSDGAGRTGTYILID NRMAKGVKEIDIAATL R T G V K E 1 1 1 1 0 0 0 2 0 2 2 2 2 0 0 0 2 0 1 2 0 0 19 2 2122.1643 Q16849 Q16849 916 934 PTPRN Receptor-type tyrosine-protein phosphatase-like N yes yes 2 0.03035 46.378 By MS/MS 1 0 0 0 6450 2169 7359 16281 15748 15748 869 1 TGVAGEDMQDNSGTYGK IYQGFEKKTGVAGEDM DNSGTYGKIWEGSSKC K T G G K I 1 0 1 2 0 1 1 4 0 0 0 1 1 0 0 1 2 0 1 1 0 0 17 0 1728.7261 Q05655 Q05655 320 336 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2 2.2629E-52 181.76 By MS/MS By MS/MS 1 1 19824000 10304000 9519700 6451 2004 7360 16282;16283 15749;15750;15751 15749 789 8320 3 THHSLLMRRNLTK PKVIQVNRTHHSLLMR LMRRNLTKLFQFARGT R T H T K L 0 2 1 0 0 0 0 0 2 0 3 1 1 0 0 1 2 0 0 0 0 0 13 2 1605.8886 J3QS37 J3QS37 132 144 yes yes 2 0.0026688 74.783 By MS/MS 1 39202000 0 39202000 6452 1358 7361 16284 15752 15752 2508;7254;7255 1 THSFENVSCHLPDSR TSLLHIARTHSFENVS SCHLPDSRTCMSESTW R T H S R T 0 1 1 1 1 0 1 0 2 0 1 0 0 1 1 3 1 0 0 1 0 0 15 0 1784.79 R4GNB2;R4GN35;Q5VZ89;X6RAE7 R4GNB2 1097 1111 DENND4C DENN domain-containing protein 4C yes no 3 0.00070347 83.869 By MS/MS By MS/MS 1 1 23250000 10768000 12483000 6453 2281 7362 16285;16286 15753;15754 15754 4584 2 THSTSSSLGSGESPFSR MTRLARSRTHSTSSSL SGESPFSRSVTSNQSD R T H S R S 0 1 0 0 0 0 1 2 1 0 1 0 0 1 1 7 2 0 0 0 0 0 17 0 1722.7809 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 234 250 NDRG3 Protein NDRG3 yes no 2;3 0.0017694 87.088 By MS/MS By MS/MS 2 2 115900000 66604000 49296000 6454 1049 7363 16287;16288;16289;16290 15755;15756;15757 15755 1986;7166;7167 3 THSVSSPTVGKPYK DALTGHLRTHSVSSPT PTVGKPYKCNYCGRSY R T H Y K C 0 0 0 0 0 0 0 1 1 0 0 2 0 0 2 3 2 0 1 2 0 0 14 1 1486.778 F8VPL6;Q9H2S9 F8VPL6 191 204 IKZF4 Zinc finger protein Eos yes no 2 0.027125 53.597 By MS/MS 1 0 0 0 6455 1001 7364 16291 15758 15758 1880;1881 1 THTTALAGRSPSPASGR RSRSAAAKTHTTALAG SPSPASGRRGEGDAPF K T H G R R 3 2 0 0 0 0 0 2 1 0 1 0 0 0 2 3 3 0 0 0 0 0 17 1 1665.8547 Q9UQ35;I3L4D8;I3L182;I3L1I8;A0A087X1W1 Q9UQ35 286 302 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0051315 63.062 By MS/MS By MS/MS 1 1 933530000 520210000 413320000 6456 3074 7365 16292;16293 15759;15760 15760 6602;6603;6604 2 THTTALAGRSPSPASGRR RSRSAAAKTHTTALAG PSPASGRRGEGDAPFS K T H R R G 3 3 0 0 0 0 0 2 1 0 1 0 0 0 2 3 3 0 0 0 0 0 18 2 1821.9558 Q9UQ35;I3L4D8;I3L182;I3L1I8;A0A087X1W1 Q9UQ35 286 303 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.021368 56.339 By MS/MS By matching 1 1 91233000 31606000 59626000 6457 3074 7366 16294;16295 15761 15761 6602;6603;6604 1 TIAATPIQTLPQSQSTPK SQPATPTRTIAATPIQ PQSQSTPKRIDTPSLE R T I P K R 2 0 0 0 0 3 0 0 0 2 1 1 0 0 3 2 4 0 0 0 0 0 18 0 1881.0207 A0A0C4DG88;P14859 A0A0C4DG88 163 180 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 2 2.8521E-32 166.62 By MS/MS By MS/MS 1 1 51069000 25392000 25677000 6458 309 7367 16296;16297 15762;15763 15762 541;6922 2 TIAECLADELINAAK EAAFRNIKTIAECLAD DELINAAKGSSNSYAI K T I A K G 4 0 1 1 1 0 2 0 0 2 2 1 0 0 0 0 1 0 0 0 0 0 15 0 1630.8236 M0QZN2;M0R0F0;M0R0R2;P46782 M0QZN2 98 112 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 2 2.275E-15 147.71 By MS/MS By MS/MS 1 1 17443000 9992700 7450600 6459 1414 7368 16298;16299 15764;15765 15764 2 TIAHSPTSFTESSSK TVEHDENRTIAHSPTS SFTESSSKESQNTAEI R T I S K E 1 0 0 0 0 0 1 0 1 1 0 1 0 1 1 5 3 0 0 0 0 0 15 0 1578.7526 Q03164 Q03164 2094 2108 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 2;3 0.00050897 99.069 By MS/MS By MS/MS 2 2 50702000 29397000 21305000 6460 1994 7369 16300;16301;16302;16303 15766;15767;15768;15769 15767 3844 4 TIAIIAEGIPEALTR TMNYAQIRTIAIIAEG GIPEALTRKLIKKADQ R T I T R K 3 1 0 0 0 0 2 1 0 4 1 0 0 0 1 0 2 0 0 0 0 0 15 0 1566.8981 P53396 P53396 593 607 ACLY ATP-citrate synthase yes yes 2 0.018052 73.848 By MS/MS 1 1937500 0 1937500 6461 1895 7370 16304 15770 15770 1 TIAPALVSK KAVEHINKTIAPALVS IAPALVSKKLNVTEQE K T I S K K 2 0 0 0 0 0 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 9 0 898.54877 P06733;K7EM90 P06733 72 80 ENO1 Alpha-enolase;Enolase yes no 2 0.024555 76.221 By MS/MS By matching 1 1 23133000 11587000 11546000 6462 1646 7371 16305;16306 15771 15771 1 TIAQDYGVLK PLVSDPKRTIAQDYGV AQDYGVLKADEGISFR R T I L K A 1 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 1 0 1 1 0 0 10 0 1106.5972 A0A0A0MSI0;Q06830 A0A0A0MSI0 111 120 PRDX1 Peroxiredoxin-1 yes no 2 0.025171 72.928 By MS/MS By matching 1 1 29532000 16119000 13413000 6463 247 7372 16307;16308 15772 15772 1 TIASDSEEEAGKELSDK DKSGKREKTIASDSEE AGKELSDKKNEEKDLF K T I D K K 2 0 0 2 0 0 4 1 0 1 1 2 0 0 0 3 1 0 0 0 0 0 17 1 1807.8323 Q96ST2 Q96ST2 435 451 IWS1 Protein IWS1 homolog yes yes 2;3 2.1739E-41 177.66 By MS/MS By MS/MS 2 1 255910000 120790000 135120000 6464 2711 7373 16309;16310;16311 15773;15774;15775 15775 5609;5610 2 TIASDSEEEAGKELSDKK DKSGKREKTIASDSEE GKELSDKKNEEKDLFG K T I K K N 2 0 0 2 0 0 4 1 0 1 1 3 0 0 0 3 1 0 0 0 0 0 18 2 1935.9273 Q96ST2 Q96ST2 435 452 IWS1 Protein IWS1 homolog yes yes 3 0.0010376 86.411 By MS/MS By MS/MS 1 1 84434000 43496000 40939000 6465 2711 7374 16312;16313 15776;15777 15776 5609;5610 2 TICTFDSSGFESMSPIKETVSSR TSQKAKRRTICTFDSS IKETVSSRQKPQMAPP R T I S R Q 0 1 0 1 1 0 2 1 0 2 0 1 1 2 1 6 3 0 0 1 0 0 23 1 2565.1727 E9PEI0;Q69YH5 E9PEI0 908 930 CDCA2 Cell division cycle-associated protein 2 yes no 3 0.00017574 78.554 By MS/MS By MS/MS 2 2 31571000 16257000 15314000 6466 856 7375;7376 16314;16315;16316;16317 15778;15779;15780;15781 15781 324 1588;1589;1590 4 TIDLGAAAHYTGDKASPDQNASTHTPQSSVK KRTANPSKTIDLGAAA HTPQSSVKTSVPSSKS K T I V K T 5 0 1 3 0 2 0 2 2 1 1 2 0 0 2 4 4 0 1 1 0 0 31 1 3167.5119 Q14677 Q14677 284 314 CLINT1 Clathrin interactor 1 yes yes 4 0.001295 54.596 By MS/MS 1 70802000 70802000 0 6467 2099 7377 16318 15782 15782 4150 1 TIETSPSLSR PKKVLDGKTIETSPSL ETSPSLSRMPNQHACK K T I S R M 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 3 2 0 0 0 0 0 10 0 1089.5666 H3BP78;F8W7R3;Q9NVI1 H3BP78 230 239 FANCI Fanconi anemia group I protein yes no 2 0.00035479 133.91 By MS/MS By MS/MS 1 1 122940000 66610000 56333000 6468 1036 7378 16319;16320 15783;15784 15783 7163 2 TIGGGDDSFNTFFSETGAGK DGQMPSDKTIGGGDDS FSETGAGKHVPRAVFV K T I G K H 1 0 1 2 0 0 1 5 0 1 0 1 0 3 0 2 3 0 0 0 0 0 20 0 2006.8858 F5H5D3;Q9BQE3;F8VVB9;F8VRZ4;F8VS66;F8VRK0;F8VX09;F8VWV9;F8VXZ7;F8W0F6;P68363;Q71U36;Q6PEY2;Q13748;F8VQQ4 P68363 111 130 TUBA1C;TUBA1B;TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain no no 2;3 5.8779E-56 148.18 By MS/MS By MS/MS 3 3 246430000 118350000 128080000 6469 976;1957;2360 7379;7380 16321;16322;16323;16324;16325;16326 15785;15786;15787;15788;15789 15787 1828 5 TILQASLPQNDIEILK LTQLKLSRTILQASLP QNDIEILKPVNMLLSI R T I L K P 1 0 1 1 0 2 1 0 0 3 3 1 0 0 1 1 1 0 0 0 0 0 16 0 1795.0091 Q709C8 Q709C8 1819 1834 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 2 0.029285 48.188 By MS/MS 1 1782800 0 1782800 6470 2357 7381 16327 15790 15790 0 TILSNQTVDIPENVDITLK ________________ ENVDITLKGRTVIVKG K T I L K G 0 0 2 2 0 1 1 0 0 3 2 1 0 0 1 1 3 0 0 2 0 0 19 0 2112.1314 E7ESE0;D6RAN4;P32969 E7ESE0 3 21 RPL9 60S ribosomal protein L9 yes no 2 0.0093478 70.98 By matching By MS/MS 1 1 9066100 4693400 4372700 6471 743 7382 16328;16329 15791 15791 1 TINVSNLYVGGIPEGEGTSLLTMRR LGTLVESRTINVSNLY TSLLTMRRSFHGCIKN R T I R R S 0 2 2 0 0 0 2 4 0 2 3 0 1 0 1 2 3 0 1 2 0 0 25 1 2676.3905 P25391 P25391 2617 2641 LAMA1 Laminin subunit alpha-1 yes yes 3 0.028056 45.737 By MS/MS 1 3957700 0 3957700 6472 1761 7383 16330 15792 15792 3327 0 TIPVQAFEVK QPSTRKAKTIPVQAFE PVQAFEVKLDVTLGDL K T I V K L 1 0 0 0 0 1 1 0 0 1 0 1 0 1 1 0 1 0 0 2 0 0 10 0 1130.6336 O15357;A0A0A0MTP6;F5GY16 O15357 306 315 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 0.010746 84.821 By matching By MS/MS 1 1 6411500 3670300 2741200 6473 1479 7384 16331;16332 15793 15793 7307 1 TIQEVLEEQSEDEDR ARKQLPKRTIQEVLEE EQSEDEDREAKRKKEE R T I D R E 0 1 0 2 0 2 5 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 15 0 1818.8119 M0R0Q7;P18858 M0R0Q7 132 146 LIG1 DNA ligase;DNA ligase 1 yes no 2;3 7.5693E-67 204.9 By MS/MS By MS/MS 2 2 225000000 113790000 111210000 6474 1420 7385 16333;16334;16335;16336 15794;15795;15796;15797 15797 2605 4 TIQEVLEEQSEDEDREAK ARKQLPKRTIQEVLEE EDEDREAKRKKEEEEE R T I A K R 1 1 0 2 0 2 6 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 18 1 2146.9866 M0R0Q7;P18858 M0R0Q7 132 149 LIG1 DNA ligase;DNA ligase 1 yes no 2;3 9.8425E-92 212.41 By MS/MS By MS/MS 2 2 389280000 197620000 191660000 6475 1420 7386 16337;16338;16339;16340 15798;15799;15800;15801 15798 2605 4 TIQFVDWCPTGFK IATIKTKRTIQFVDWC DWCPTGFKVGINYQPP R T I F K V 0 0 0 1 1 1 0 1 0 1 0 1 0 2 1 0 2 1 0 1 0 0 13 0 1597.7599 F5H5D3;Q9BQE3;C9J2C0;Q9NY65;V9GZ17;Q71U36;Q6PEY2;Q13748 F5H5D3 410 422 TUBA1C;TUBA8;TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain no no 2 0.0066264 109.6 By MS/MS 1 0 0 0 6476 976;2360 7387 16341 15802 15802 1 TISAQDTLAYATALLNEK STGKTFQRTISAQDTL ATALLNEKEQSGSSNG R T I E K E 4 0 1 1 0 1 1 0 0 1 3 1 0 0 0 1 3 0 1 0 0 0 18 0 1921.9997 Q9UPU5;A0A0U1RQI9 Q9UPU5 2559 2576 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes no 2;3 2.3725E-265 292.35 By MS/MS By MS/MS 2 2 208350000 123100000 85244000 6477 3069 7388 16342;16343;16344;16345 15803;15804;15805;15806 15803 6494 4 TISGPLIPPASPR PSPRLPNKTISGPLIP LIPPASPRLGNTSEAH K T I P R L 1 1 0 0 0 0 0 1 0 2 1 0 0 0 4 2 1 0 0 0 0 0 13 0 1304.7452 A0A0A0MSG0;A6NGB9 A0A0A0MSG0 139 151 WIPF3 WAS/WASL-interacting protein family member 3 yes no 2 0.021977 64.244 By MS/MS By matching 1 1 14283000 7870400 6412400 6478 246 7389 16346;16347 15807 15807 429 1 TISNPEVVMK MPETSFTRTISNPEVV SNPEVVMKRRRQQKLE R T I M K R 0 0 1 0 0 0 1 0 0 1 0 1 1 0 1 1 1 0 0 2 0 0 10 0 1116.5849 A8MQ02;J3KN01;P55196;Q5TIG5;F8W9I4;E9PFY5 A8MQ02 173 182 MLLT4 Afadin yes no 2 0.001878 80.871 By matching By MS/MS 2 2 171410000 88883000 82532000 6479 494 7390;7391 16348;16349;16350;16351 15808;15809 15808 195 908 2 TISPPTLGTLR FESSKFTRTISPPTLG PPTLGTLRSCFSWSGG R T I L R S 0 1 0 0 0 0 0 1 0 1 2 0 0 0 2 1 3 0 0 0 0 0 11 0 1154.6659 Q9UQ84 Q9UQ84 596 606 EXO1 Exonuclease 1 yes yes 2 0.0021269 88.803 By MS/MS By MS/MS 1 1 10176000 5607200 4569000 6480 3076 7392 16352;16353 15810;15811;15812 15812 6612 3 TISPSTSNNIPLMR PDHEDANRTISPSTSN SNNIPLMRVVQSVKHT R T I M R V 0 1 2 0 0 0 0 0 0 2 1 0 1 0 2 3 2 0 0 0 0 0 14 0 1529.7872 O94806;Q15139;F8WBA3 Q15139 395 408 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase no no 2 2.1777E-05 124.42 By MS/MS By MS/MS 3 3 176530000 84841000 91685000 6481 2129;1569 7393;7394;7395 16354;16355;16356;16357;16358;16359 15813;15814;15815;15816;15817;15818 15816 566 2976;7351 6 TISTSDPAEVLVK QEKAFSLKTISTSDPA DPAEVLVKNSQPIKTL K T I V K N 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 2 0 0 2 0 0 13 0 1358.7293 Q86UE4;E5RJU9 Q86UE4 492 504 MTDH Protein LYRIC yes no 2 0.0038545 83.499 By MS/MS By MS/MS 1 1 19992000 12114000 7878300 6482 2401 7396 16360;16361 15819;15820 15819 4901 2 TITLEVEPSDTIENVK FVKTLTGKTITLEVEP SDTIENVKAKIQDKEG K T I V K A 0 0 1 1 0 0 3 0 0 2 1 1 0 0 1 1 3 0 0 2 0 0 16 0 1786.92 P62979;M0R1V7;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5PY61;Q96C32;P62987;P0CG47;P0CG48;J3QSA3;F5GZ39 P62979 12 27 RPS27A;UBA52;UBB;UBC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 2;3 7.2105E-64 246.56 By MS/MS By MS/MS 2 2 220900000 84936000 135960000 6483 1952 7397 16362;16363;16364;16365 15821;15822;15823;15824 15823 4 TITLVKSPISVPGGSALISNLGK TVVGGVTKTITLVKSP ALISNLGKVMSVVQTK K T I G K V 1 0 1 0 0 0 0 3 0 3 3 2 0 0 2 4 2 0 0 2 0 0 23 1 2251.3151 P51610;A6NEM2 P51610 660 682 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 3 4.8432E-05 107.74 By MS/MS By MS/MS 1 1 156720000 84109000 72610000 6484 1877 7398 16366;16367 15825;15826 15825 3639 2 TKECSVEKGTGDSLR PIETGSPKTKECSVEK KGTGDSLRESKVNGDD K T K L R E 0 1 0 1 1 0 2 2 0 0 1 2 0 0 0 2 2 0 0 1 0 0 15 2 1665.7992 Q5T757;Q05519 Q5T757 392 406 SRSF11 Serine/arginine-rich splicing factor 11 yes no 3 0.0059423 77.372 By MS/MS By MS/MS 1 1 38004000 19397000 18608000 6485 2003 7399 16368;16369 15827;15828;15829 15829 3864 3 TKEVYELLDSPGK GKKLYEGKTKEVYELL ELLDSPGKVLLQSKDQ K T K G K V 0 0 0 1 0 0 2 1 0 0 2 2 0 0 1 1 1 0 1 1 0 0 13 1 1477.7664 E9PBS1;P22234 E9PBS1 18 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 0.024101 70.167 By MS/MS By matching 1 1 21962000 12714000 9247500 6486 845 7400 16370;16371 15830 15830 1574 1 TKEVYELLDSPGKVLLQSK GKKLYEGKTKEVYELL GKVLLQSKDQITAGNA K T K S K D 0 0 0 1 0 1 2 1 0 0 4 3 0 0 1 2 1 0 1 2 0 0 19 2 2146.1885 E9PBS1;P22234 E9PBS1 18 36 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 3 0.00041606 111.25 By MS/MS By MS/MS 1 1 55444000 35830000 19614000 6487 845 7401 16372;16373 15831;15832 15831 1574 2 TKEYVSNDAAQSDDEEKLQSQPTDTDGGR LTLHIMRRTKEYVSND PTDTDGGRLKQKTTQL R T K G R L 2 1 1 5 0 3 3 2 0 0 1 2 0 0 1 3 3 0 1 1 0 0 29 2 3183.4076 Q5JSH3;H7BY83 Q5JSH3 392 420 WDR44 WD repeat-containing protein 44 yes no 3;4 0.0012316 64.305 By MS/MS By matching 2 2 69978000 35585000 34392000 6488 2219 7402 16374;16375;16376;16377 15833;15834;15835 15834 4434 3 TKFASDDEHDEHDENGATGPVKR KVQFQGKKTKFASDDE GATGPVKRAREETDKE K T K K R A 2 1 1 4 0 0 3 2 2 0 0 2 0 1 1 1 2 0 0 1 0 0 23 2 2554.132 P05455 P05455 362 384 SSB Lupus La protein yes yes 3;4 1.8039E-05 93.062 By MS/MS By MS/MS 4 4 361140000 199190000 161950000 6489 1643 7403;7404 16378;16379;16380;16381;16382;16383;16384;16385 15836;15837;15838;15839;15840 15838 67 3102 5 TKPTQAAGPSSPQKPPTPEETK PQKQPQTKTKPTQAAG PPTPEETKAASPVLQE K T K T K A 2 0 0 0 0 2 2 1 0 0 0 3 0 0 6 2 4 0 0 0 0 0 22 2 2276.1648 F5H8D7;P18887 F5H8D7 406 427 XRCC1 DNA repair protein XRCC1 yes no 3 0.00015859 87.61 By MS/MS By MS/MS 2 2 254250000 135150000 119100000 6490 988 7405;7406 16386;16387;16388;16389 15841;15842;15843 15841 1861;7145 3 TKSLIAQDHR KRGRSFIRTKSLIAQD SLIAQDHRSSLEEEQN R T K H R S 1 1 0 1 0 1 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 10 1 1167.636 E9PB39;H0YAN8;O15013 E9PB39 108 117 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes no 3 0.013884 56.043 By MS/MS By matching 1 1 7770900 4016400 3754500 6491 842 7407 16390;16391 15844 15844 1571 1 TLDFDPLLSPASPK ACGATLKRTLDFDPLL LLSPASPKRRRCAPLS R T L P K R 1 0 0 2 0 0 0 0 0 0 3 1 0 1 3 2 1 0 0 0 0 0 14 0 1499.7872 Q53H80 Q53H80 10 23 AKIRIN2 Akirin-2 yes yes 2 2.224E-81 218.2 By MS/MS By MS/MS 1 1 51194000 34419000 16775000 6492 2205 7408 16392;16393 15845;15846 15845 4415;4416 2 TLDFDPLLSPASPKR ACGATLKRTLDFDPLL LSPASPKRRRCAPLSA R T L K R R 1 1 0 2 0 0 0 0 0 0 3 1 0 1 3 2 1 0 0 0 0 0 15 1 1655.8883 Q53H80 Q53H80 10 24 AKIRIN2 Akirin-2 yes yes 2;3 0.00030152 93.823 By MS/MS By MS/MS 2 2 26334000 14550000 11785000 6493 2205 7409 16394;16395;16396;16397 15847;15848;15849;15850 15847 4415;4416 4 TLDPLLMSEPKPRTSSPR KAPRSKNKTLDPLLMS KPRTSSPRGDKAAYDI K T L P R G 0 2 0 1 0 0 1 0 0 0 3 1 1 0 4 3 2 0 0 0 0 0 18 2 2024.0725 Q6GPH4 Q6GPH4 238 255 XAF1 XIAP-associated factor 1 yes yes 2 0.02768 48.677 By MS/MS 1 23223000 23223000 0 6494 2302 7410 16398 15851 15851 922 4635 0 TLDSDEERPRPAPPDWSHMR PPGELYRRTLDSDEER PPDWSHMRGIISSDGE R T L M R G 1 3 0 3 0 0 2 0 1 0 1 0 1 0 4 2 1 1 0 0 0 0 20 2 2391.1026 Q9BW71 Q9BW71 527 546 HIRIP3 HIRA-interacting protein 3 yes yes 4 0.031936 45.916 By MS/MS By matching 1 1 39344000 22930000 16414000 6495 2760 7411 16399;16400 15852 15852 1 TLDSGTSEIVKSPR SSLEEKQRTLDSGTSE SEIVKSPRIECSKTRR R T L P R I 0 1 0 1 0 0 1 1 0 1 1 1 0 0 1 3 2 0 0 1 0 0 14 1 1488.7784 Q9H501 Q9H501 187 200 ESF1 ESF1 homolog yes yes 2 0.0021059 108.96 By MS/MS By MS/MS 1 1 126540000 68392000 58146000 6496 2837 7412 16401;16402 15853;15854 15853 5958 2 TLEEDEEELFK SLPEQEIKTLEEDEEE EDEEELFKMRAKLFRF K T L F K M 0 0 0 1 0 0 5 0 0 0 2 1 0 1 0 0 1 0 0 0 0 0 11 0 1380.6297 C9JJ34;P43487;C9JDM3;F6WQW2 C9JJ34 40 50 RANBP1 Ran-specific GTPase-activating protein yes no 2 1.8633E-05 125.97 By MS/MS By MS/MS 1 1 19530000 11544000 7985900 6497 668 7413 16403;16404 15855;15856 15855 2 TLEEVVMAEEEDEGTDRPGSPA VESKLRGRTLEEVVMA TDRPGSPA________ R T L P A - 2 1 0 2 0 0 6 2 0 0 1 0 1 0 2 1 2 0 0 2 0 0 22 1 2360.0326 F8WC89;A6NKF1 F8WC89 337 358 SAC3D1 SAC3 domain-containing protein 1 yes no 2;3 4.1636E-07 128.66 By MS/MS By MS/MS 4 4 102540000 51551000 50989000 6498 477 7414;7415 16405;16406;16407;16408;16409;16410;16411;16412 15857;15858;15859;15860;15861;15862 15860 182 871 6 TLEPVKPPTVPNDYMTSPAR LGRNTPYKTLEPVKPP DYMTSPARLGSQHSPG K T L A R L 1 1 1 1 0 0 1 0 0 0 1 1 1 0 5 1 3 0 1 2 0 0 20 1 2212.1198 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 200 219 ABI1 Abl interactor 1 yes no 2;3 0.00010725 102.79 By MS/MS By MS/MS 2 3 118620000 49493000 69123000 6499 231 7416;7417 16413;16414;16415;16416;16417 15863;15864;15865;15866;15867;15868 15864 98 407;8013 6 TLEPVRPPVVPNDYVPSPTR LGRHSPYRTLEPVRPP DYVPSPTRNMAPSQQS R T L T R N 0 2 1 1 0 0 1 0 0 0 1 0 0 0 6 1 2 0 1 4 0 0 20 1 2232.1903 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9 H7C3Q7 66 85 ABI2 Abl interactor 2 yes no 3 0.0046182 67.655 By MS/MS By MS/MS 1 1 36961000 21273000 15688000 6500 306 7418 16418;16419 15869;15870;15871 15870 8025 3 TLETQPLAPDCCPSDQDPAPAHPSPHASPMNK ________________ PHASPMNKNADSELMP K T L N K N 4 0 1 3 2 2 1 0 2 0 2 1 1 0 8 3 2 0 0 0 0 0 32 0 3465.5388 E9PMG4;Q9BUR4;E9PMR3 E9PMG4 3 34 WRAP53 Telomerase Cajal body protein 1 yes no 3 0.004706 49.445 By MS/MS By matching 1 1 32499000 15771000 16728000 6501 913 7419 16420;16421 15872 15872 344 1697;1698 1 TLEVVSPSQSVTGSAGHTPYYQSPTDEK HCASPEDKTLEVVSPS YQSPTDEKSSHLPTEV K T L E K S 1 0 0 1 0 2 2 2 1 0 1 1 0 0 3 5 4 0 2 3 0 0 28 0 2964.3989 P46821 P46821 1317 1344 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 5.5273E-05 74.63 By MS/MS By MS/MS 3 4 125860000 59716000 66140000 6502 1840 7420;7421 16422;16423;16424;16425;16426;16427;16428 15873;15874;15875;15876 15873 3515;3516;3517;8276 3 TLFASPLAK VRKARHRRTLFASPLA LFASPLAKSTANGNLL R T L A K S 2 0 0 0 0 0 0 0 0 0 2 1 0 1 1 1 1 0 0 0 0 0 9 0 946.54877 Q96HA1 Q96HA1 104 112 POM121 Nuclear envelope pore membrane protein POM 121 yes yes 2 0.010899 76.927 By matching By MS/MS 1 1 4726500 2988800 1737700 6503 2660 7422 16429;16430 15877 15877 5486 1 TLFLGIPDENFEDHSAPPSPEEK ERDVKGIRTLFLGIPD APPSPEEKDSGFFMLR R T L E K D 1 0 1 2 0 0 4 1 1 1 2 1 0 2 4 2 1 0 0 0 0 0 23 0 2568.202 Q99683 Q99683 1015 1037 MAP3K5 Mitogen-activated protein kinase kinase kinase 5 yes yes 3 0.0047294 54.668 By MS/MS By MS/MS 1 1 35034000 21513000 13522000 6504 2731 7423 16431;16432 15878;15879 15878 5670 2 TLFPLIEAK QIPLSKIKTLFPLIEA LFPLIEAKKKDQVTAQ K T L A K K 1 0 0 0 0 0 1 0 0 1 2 1 0 1 1 0 1 0 0 0 0 0 9 0 1030.6063 P13010 P13010 535 543 XRCC5 X-ray repair cross-complementing protein 5 yes yes 2 0.015445 82.75 By MS/MS 1 2782800 0 2782800 6505 1690 7424 16433 15880 15880 1 TLGDFAAEYAK GIGSKAEKTLGDFAAE DFAAEYAKSNRSTCKG K T L A K S 3 0 0 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 11 0 1184.5714 P09874 P09874 109 119 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.00864 83.862 By matching By MS/MS 1 1 12550000 5882700 6667500 6506 1665 7425 16434;16435 15881 15881 1 TLGTPTQPGSTPR LAFTPPIKTLGTPTQP TQPGSTPRISTMRPLA K T L P R I 0 1 0 0 0 1 0 2 0 0 1 0 0 0 3 1 4 0 0 0 0 0 13 0 1311.6783 Q8NFH5 Q8NFH5 270 282 NUP35 Nucleoporin NUP53 yes yes 2 0.030853 61.435 By MS/MS By matching 1 1 50793000 26419000 24374000 6507 2518 7426 16436;16437 15882 15882 0 TLHCEGTEINSDDEQESK PFKTKKIKTLHCEGTE SDDEQESKEVEETATA K T L S K E 0 0 1 2 1 1 4 1 1 1 1 1 0 0 0 2 2 0 0 0 0 0 18 0 2090.8699 Q9BPX3;H0Y9Z8 Q9BPX3 664 681 NCAPG Condensin complex subunit 3 yes no 2;3 7.2902E-65 195.09 By MS/MS By MS/MS 2 2 396940000 218260000 178680000 6508 2739 7427 16438;16439;16440;16441 15883;15884;15885;15886 15884 5684 4 TLIYQMAPAVSK ATNGAESKTLIYQMAP QMAPAVSKTEDVWVRI K T L S K T 2 0 0 0 0 1 0 0 0 1 1 1 1 0 1 1 1 0 1 1 0 0 12 0 1320.7112 P25054 P25054 2642 2653 APC Adenomatous polyposis coli protein yes yes 2 0.0012614 84.605 By matching By MS/MS 1 1 17873000 9722400 8150200 6509 1760 7428 16442;16443 15887;15888 15888 663 8247 2 TLKMIYLQWKMSVEK YVVPLDWKTLKMIYLQ QWKMSVEKRQKKIG__ K T L E K R 0 0 0 0 0 1 1 0 0 1 2 3 2 0 0 1 1 1 1 1 0 0 15 2 1897.0205 B4DPY1 B4DPY1 717 731 N4BP2L2 yes yes 3 0.018212 51.875 By MS/MS 1 33493000 33493000 0 6510 556 7429 16444 15889 15889 221 1033;8072 0 TLLEEPSHQHVTQETQAK YSKLLLEKTLLEEPSH VTQETQAKPGYQPSGE K T L A K P 1 0 0 0 0 3 3 0 2 0 2 1 0 0 1 1 3 0 0 1 0 0 18 0 2075.0283 Q5VT06 Q5VT06 669 686 CEP350 Centrosome-associated protein 350 yes yes 2 0.021666 49.448 By MS/MS By matching 1 1 15309000 7599300 7709400 6511 2263 7430 16445;16446 15890 15890 1 TLLEQLDDDQ GELEKRRRTLLEQLDD LEQLDDDQ________ R T L D Q - 0 0 0 3 0 2 1 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 10 0 1188.551 O75400 O75400 948 957 PRPF40A Pre-mRNA-processing factor 40 homolog A yes yes 2 3.9184E-60 218.58 By MS/MS By MS/MS 1 1 21877000 13325000 8552000 6512 1544 7431 16447;16448 15891;15892 15891 2 TLLPWDSDESPEASPGPPGPR KKGRTIVKTLLPWDSD SPGPPGPRRGAGAGGP K T L P R R 1 1 0 2 0 0 2 2 0 0 2 0 0 0 6 3 1 1 0 0 0 0 21 0 2204.0386 Q9UMN6 Q9UMN6 1026 1046 KMT2B Histone-lysine N-methyltransferase 2B yes yes 2;3 0.000107 94.551 By MS/MS By MS/MS 2 2 36042000 23509000 12533000 6513 3054 7432;7433 16449;16450;16451;16452 15893;15894 15893 6445;6446 2 TLLSESSSQSSKSPSLSSK LDSLGRKKTLLSESSS KSPSLSSKQQHQPSAS K T L S K Q 0 0 0 0 0 1 1 0 0 0 3 2 0 0 1 10 1 0 0 0 0 0 19 1 1938.9746 Q9UPU5 Q9UPU5 1129 1147 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 3 0.00056827 80.545 By MS/MS By MS/MS 1 1 25201000 11793000 13408000 6514 3069 7434 16453;16454 15895;15896 15896 6495 2 TLLSLNLKQTKSTFI LEQDQQDKTLLSLNLK KQTKSTFI________ K T L F I - 0 0 1 0 0 1 0 0 0 1 4 2 0 1 0 2 3 0 0 0 0 0 15 2 1705.9978 Q9H0W7 Q9H0W7 214 228 THAP2 THAP domain-containing protein 2 yes yes 2 0.017796 68.173 By matching By MS/MS 1 1 13684000 8168400 5516100 6515 2808 7435 16455;16456 15897 15897 5874 1 TLLTGDGGGEATGSPLAQGK AAEITRLRTLLTGDGG GSPLAQGKDAYELEVL R T L G K D 2 0 0 1 0 1 1 6 0 0 3 1 0 0 1 1 3 0 0 0 0 0 20 0 1828.9167 Q6WCQ1;J3KSW8;H0Y7E2;H0Y2S9 Q6WCQ1 878 897 MPRIP Myosin phosphatase Rho-interacting protein yes no 2 0.00013205 119.48 By matching By MS/MS 1 1 15496000 8737400 6758400 6516 2345 7436 16457;16458 15898 15898 4751 1 TLMLPLTEGSLR SMLLDLERTLMLPLTE PLTEGSLRLRADDEDS R T L L R L 0 1 0 0 0 0 1 1 0 0 4 0 1 0 1 1 2 0 0 0 0 0 12 0 1329.7326 Q7L4E1 Q7L4E1 267 278 FAM73B Protein FAM73B yes yes 2 0.0002333 103.3 By MS/MS By MS/MS 1 1 14132000 8609100 5523100 6517 2365 7437 16459;16460 15899;15900 15900 951 4795 2 TLMNAVSPLK RTVQDTLKTLMNAVSP MNAVSPLKSIVANSNK K T L L K S 1 0 1 0 0 0 0 0 0 0 2 1 1 0 1 1 1 0 0 1 0 0 10 0 1072.5951 E7EQI7;Q12768 E7EQI7 763 772 KIAA0196 WASH complex subunit strumpellin yes no 2 0.028913 53.211 By MS/MS 1 0 0 0 6518 806 7438 16461 15901 15901 300 1 TLNAETPKSSPLPAK LLDEEVSRTLNAETPK KSSPLPAKGRDPVEIL R T L A K G 2 0 1 0 0 0 1 0 0 0 2 2 0 0 3 2 2 0 0 0 0 0 15 1 1552.8461 Q7L2J0 Q7L2J0 208 222 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2;3 1.1052E-33 177.44 By MS/MS By MS/MS 4 4 262710000 139260000 123450000 6519 2364 7439;7440 16462;16463;16464;16465;16466;16467;16468;16469 15902;15903;15904;15905;15906;15907 15907 4793;4794;7679 5 TLNDELEIIEGMKFDR VITVKDGKTLNDELEI IEGMKFDRGYISPYFI K T L D R G 0 1 1 2 0 0 3 1 0 2 2 1 1 1 0 0 1 0 0 0 0 0 16 1 1921.9455 P10809;E7EXB4;E7ESH4 P10809 206 221 HSPD1 60 kDa heat shock protein, mitochondrial yes no 3 0.00074493 93.909 By MS/MS By MS/MS 1 1 39591000 26317000 13274000 6520 1677 7441 16470;16471 15908;15909 15909 621 2 TLNMTTSPEEK TPRKRISKTLNMTTSP MTTSPEEKRKIIGDTF K T L E K R 0 0 1 0 0 0 2 0 0 0 1 1 1 0 1 1 3 0 0 0 0 0 11 0 1249.586 P49915 P49915 326 336 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 0.0051651 95.273 By MS/MS By MS/MS 1 2 54644000 20816000 33828000 6521 1864 7442;7443 16472;16473;16474 15910;15911 15910 726 3618;7479 2 TLNNDIMLIK RHPQYDRKTLNNDIML NNDIMLIKLSSRAVIN K T L I K L 0 0 2 1 0 0 0 0 0 2 2 1 1 0 0 0 1 0 0 0 0 0 10 0 1173.6427 H0Y8D1;A6XGL3;CON__P07477;A0A087WW55;E7EQ64;P07477 H0Y8D1 53 62 PRSS1 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2 yes no 2 0.0055488 103.7 By MS/MS By MS/MS 1 1 7409900 4025400 3384500 + 6522 84 7444 16475;16476 15912;15913;15914 15914 3 TLQKMMASGLTERVVSDK RQAQSKEKTLQKMMAS TERVVSDKTLSFYFPP K T L D K T 1 1 0 1 0 1 1 1 0 0 2 2 2 0 0 2 2 0 0 2 0 0 18 2 1993.0336 Q9UG63 Q9UG63 362 379 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.026896 51.524 By MS/MS 1 3103600 3103600 0 6523 2999 7445 16477 15915 15915 6307 0 TLRESDSAEGDEAESPEQQVR PEQPQPYRTLRESDSA ESPEQQVRKSTGPVPA R T L V R K 2 2 0 2 0 2 5 1 0 0 1 0 0 0 1 3 1 0 0 1 0 0 21 1 2332.0415 Q8TEH3 Q8TEH3 532 552 DENND1A DENN domain-containing protein 1A yes yes 3 0.00029793 80.733 By MS/MS 1 4561500 4561500 0 6524 2543 7446 16478 15916 15916 5194;5195 1 TLSADASVNTLPVVVSR IIGPSKERTLSADASV TLPVVVSREPSVPASC R T L S R E 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 3 2 0 0 4 0 0 17 0 1727.9418 Q92615;H0Y4V9;H0Y641 Q92615 566 582 LARP4B La-related protein 4B yes no 2 9.616E-77 201.75 By MS/MS By MS/MS 1 1 33695000 19194000 14501000 6525 2587 7447 16479;16480 15917;15918 15918 5320 2 TLSASAAEVAPR EGLRLKERTLSASAAE SAAEVAPRAVSVGSQP R T L P R A 4 1 0 0 0 0 1 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 12 0 1171.6197 Q16825 Q16825 656 667 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 yes yes 2 0.0013738 92.906 By MS/MS By MS/MS 1 1 8535300 4261300 4274000 6526 2168 7448 16481;16482 15919;15920 15920 4317 2 TLSASTQDLSPH WHLDKAPRTLSASTQD STQDLSPH________ R T L P H - 1 0 0 1 0 1 0 0 1 0 2 0 0 0 1 3 2 0 0 0 0 0 12 0 1255.6044 Q6P597 Q6P597 493 504 KLC3 Kinesin light chain 3 yes yes 2 0.0023233 87.216 By MS/MS By MS/MS 1 1 11261000 5062900 6198000 6527 2323 7449 16483;16484 15921;15922 15921 4687 2 TLSDDLDEAAK VVMEPTMKTLSDDLDE DDLDEAAKEFQEKHKK K T L A K E 2 0 0 3 0 0 1 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 11 0 1176.551 A0A087WV29;Q9H0A0 A0A087WV29 779 789 NAT10 N-acetyltransferase 10 yes no 2 0.00018834 116.03 By MS/MS By MS/MS 1 1 11696000 5421100 6275000 6528 69 7450 16485;16486 15923;15924 15924 127 2 TLSDESIYNSQR TSRRALHRTLSDESIY ESIYNSQREHFFTSRA R T L Q R E 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 3 1 0 1 0 0 0 12 0 1411.6579 F5GYF8;O43166 F5GYF8 1037 1048 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 0.0032819 84.734 By MS/MS 1 28924000 0 28924000 6529 947 7451 16487 15925 15925 1780 1 TLSDPPSPLPHGPPNK PPPPGHKRTLSDPPSP LPHGPPNKGAVPWGND R T L N K G 0 0 1 1 0 0 0 1 1 0 2 1 0 0 6 2 1 0 0 0 0 0 16 0 1652.8522 H0YBF7;A0A0A0MRE5;Q9ULH1 H0YBF7 658 673 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 2 0.0017922 80.545 By MS/MS By MS/MS 1 1 23001000 9980400 13020000 6530 1162 7452 16488;16489 15926;15927 15927 2209;2210 2 TLSDVEDQKELASPVSPELR AKLPQTVKTLSDVEDQ SPVSPELRQKEVQMNF K T L L R Q 1 1 0 2 0 1 3 0 0 0 3 1 0 0 2 3 1 0 0 2 0 0 20 1 2212.1223 Q5T4S7 Q5T4S7 166 185 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 3 0.0013622 69.612 By MS/MS 1 6313600 6313600 0 6531 2240 7453 16490 15928;15929 15929 4493 2 TLSDYNIQK GKQLEDGRTLSDYNIQ LSDYNIQKESTLHLVL R T L Q K E 0 0 1 1 0 1 0 0 0 1 1 1 0 0 0 1 1 0 1 0 0 0 9 0 1080.5451 P62979;M0R1V7;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5PY61;Q96C32;P62987;P0CG47;P0CG48;M0R1M6;M0R2S1 P62979 55 63 RPS27A;UBA52;UBB;UBC Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 2 0.0041432 106.4 By MS/MS By MS/MS 1 1 20107000 11376000 8731400 6532 1952 7454 16491;16492 15930;15931;15932 15930 3738 3 TLSEVDYAPAGPAR CSVLQMAKTLSEVDYA YAPAGPARSALLPGPL K T L A R S 3 1 0 1 0 0 1 1 0 0 1 0 0 0 2 1 1 0 1 1 0 0 14 0 1445.7151 O15357;A0A0A0MTP6;H0YFZ4 O15357 1129 1142 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 8.0062E-16 147.3 By MS/MS By MS/MS 1 1 119390000 63865000 55528000 6533 1479 7455 16493;16494 15933;15934 15933 8195 2 TLSFDTSK SLKSPHRRTLSFDTSK TLSFDTSKMNQPDSIV R T L S K M 0 0 0 1 0 0 0 0 0 0 1 1 0 1 0 2 2 0 0 0 0 0 8 0 897.44436 Q7L804 Q7L804 275 282 RAB11FIP2 Rab11 family-interacting protein 2 yes yes 2 0.019425 73.841 By MS/MS By MS/MS 1 1 28029000 15307000 12722000 6534 2367 7456 16495;16496 15935;15936 15935 4799 2 TLSINEEEPEGGFSK ________________ EPEGGFSKWNATNKDP R T L S K W 0 0 1 0 0 0 4 2 0 1 1 1 0 1 1 2 1 0 0 0 0 0 15 0 1635.7628 H0YDJ2;E9PP16;Q8ND30 H0YDJ2 7 21 PPFIBP2 Liprin-beta-2 yes no 2 0.00078386 105 By MS/MS By matching 1 1 8632800 4869000 3763800 6535 918 7457 16497;16498 15937 15937 1710 1 TLSKEEETKK AKKEEIIKTLSKEEET SKEEETKK________ K T L K K - 0 0 0 0 0 0 3 0 0 0 1 3 0 0 0 1 2 0 0 0 0 0 10 2 1191.6347 J3QR09;J3KTE4;P84098 J3QR09 184 193 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 2 0.0094902 84.605 By matching By MS/MS 1 1 5626600 2714600 2912000 6536 1342 7458 16499;16500 15938 15938 2482 1 TLSMDKGF ELEHVTRRTLSMDKGF TLSMDKGF________ R T L G F - 0 0 0 1 0 0 0 1 0 0 1 1 1 1 0 1 1 0 0 0 0 0 8 1 897.4266 P17858 P17858 773 780 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 2 0.024429 80.916 By MS/MS By MS/MS 1 1 32458000 19467000 12991000 6537 1720 7459 16501;16502 15939;15940 15940 3234 2 TLSMIEEEIR KLRSRKQRTLSMIEEE SMIEEEIRAAQEREEE R T L I R A 0 1 0 0 0 0 3 0 0 2 1 0 1 0 0 1 1 0 0 0 0 0 10 0 1219.6118 Q9Y2D5;C9JVY5 Q9Y2D5 718 727 AKAP2 A-kinase anchor protein 2 yes no 2 0.00050369 108.56 By MS/MS By MS/MS 3 3 110040000 57977000 52068000 6538 3087 7460;7461 16503;16504;16505;16506;16507;16508 15941;15942;15943;15944;15945;15946 15941 1233 6629 6 TLSPTPASATAPTSQGIPTSDEESTPKK MSTEPLPRTLSPTPAS DEESTPKKSKARILES R T L K K S 3 0 0 1 0 1 2 1 0 1 1 2 0 0 5 5 6 0 0 0 0 0 28 1 2798.3822 Q9NQS7 Q9NQS7 195 222 INCENP Inner centromere protein yes yes 3 1.4377E-07 87.468 By MS/MS By MS/MS 1 2 54354000 24174000 30181000 6539 2898 7462;7463 16509;16510;16511 15947;15948;15949 15949 6106;6107;7871;7872 3 TLSPTPSAEGYQDVR QSLGESPRTLSPTPSA AEGYQDVRDRMIHRST R T L V R D 1 1 0 1 0 1 1 1 0 0 1 0 0 0 2 2 2 0 1 1 0 0 15 0 1619.7791 J3QSX6;F8W8M4;A0A0A0MRL6;O14639;H0Y7N6;F6XFR5 J3QSX6 87 101 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.00054816 109.14 By MS/MS By MS/MS 1 1 109970000 58596000 51378000 6540 220 7464 16512;16513 15950;15951 15950 388 2 TLSSPSNRPSGETSVPPPPAVGR QRPLRGAKTLSSPSNR PPPPAVGRMYPPRSPK K T L G R M 1 2 1 0 0 0 1 2 0 0 1 0 0 0 6 5 2 0 0 2 0 0 23 1 2289.1713 Q8WWM7 Q8WWM7 421 443 ATXN2L Ataxin-2-like protein yes yes 3 0.0016771 64.845 By MS/MS By MS/MS 1 2 76610000 35604000 41006000 6541 2564 7465 16514;16515;16516 15952;15953;15954 15953 5249;5250;5251;7751 3 TLSSSAQEDIIR LRNQGVVRTLSSSAQE SAQEDIIRWFKEEQLP R T L I R W 1 1 0 1 0 1 1 0 0 2 1 0 0 0 0 3 1 0 0 0 0 0 12 0 1318.6729 Q9H788 Q9H788 313 324 SH2D4A SH2 domain-containing protein 4A yes yes 2 8.9485E-07 131.79 By MS/MS By MS/MS 1 1 56695000 26269000 30426000 6542 2847 7466 16517;16518 15955;15956 15955 5988 2 TLSTSDDVEDRENEK GLLISVIRTLSTSDDV VEDRENEKGRLEEAYE R T L E K G 0 1 1 3 0 0 3 0 0 0 1 1 0 0 0 2 2 0 0 1 0 0 15 1 1736.7701 Q96A65 Q96A65 30 44 EXOC4 Exocyst complex component 4 yes yes 2 0.0015813 107.69 By matching By MS/MS 1 1 42675000 23200000 19475000 6543 2618 7467 16519;16520 15957 15957 5388 1 TLSVAAAFNEDEDSEPEEMPPEAK TVPTLAPKTLSVAAAF EEMPPEAKMRMKNIGR K T L A K M 4 0 1 2 0 0 6 0 0 0 1 1 1 1 3 2 1 0 0 1 0 0 24 0 2605.1378 Q8WW12 Q8WW12 106 129 PCNP PEST proteolytic signal-containing nuclear protein yes yes 2;3 6.6722E-06 91.079 By MS/MS By MS/MS 14 16 418050000 183200000 234850000 6544 2562 7468;7469 16521;16522;16523;16524;16525;16526;16527;16528;16529;16530;16531;16532;16533;16534;16535;16536;16537;16538;16539;16540;16541;16542;16543;16544;16545;16546;16547;16548;16549;16550 15958;15959;15960;15961;15962;15963;15964;15965;15966;15967;15968;15969;15970;15971;15972;15973;15974;15975;15976;15977;15978;15979;15980;15981;15982;15983;15984;15985;15986;15987;15988;15989;15990;15991 15972 1025 5236;5237 32 TLSVEPSQQLDTASTEETDPETSQPEPNRPSELDLR VWVRAGHRTLSVEPSQ RPSELDLRLTEEGERM R T L L R L 1 2 1 3 0 3 6 0 0 0 4 0 0 0 5 5 5 0 0 1 0 0 36 1 3995.872 Q8TEQ6 Q8TEQ6 1309 1344 GEMIN5 Gem-associated protein 5 yes yes 3 0.0063632 47.522 By MS/MS By matching 1 1 39322000 18107000 21215000 6545 2546 7470 16551;16552 15992 15992 5201 1 TLTDEVNSPDSDRR RRKKISAKTLTDEVNS NSPDSDRRDKKGGNYK K T L R R D 0 2 1 3 0 0 1 0 0 0 1 0 0 0 1 2 2 0 0 1 0 0 14 1 1603.7438 F8VXC8;Q8TAQ2 F8VXC8 276 289 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 3 0.0030318 72.731 By MS/MS By MS/MS 1 2 79731000 44282000 35448000 6546 1026 7471 16553;16554;16555 15993;15994 15994 1921 2 TLTLVDTGIGMTK IIPNPQERTLTLVDTG DTGIGMTKADLINNLG R T L T K A 0 0 0 1 0 0 0 2 0 1 2 1 1 0 0 0 4 0 0 1 0 0 13 0 1348.7272 P08238 P08238 83 95 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.000486 119.03 By MS/MS By MS/MS 2 2 17512000 11900000 5612400 6547 1658 7472 16556;16557;16558;16559 15995;15996;15997;15998 15997 4 TLVITSTPASPNR QAEVTALKTLVITSTP STPASPNRELHPQLLS K T L N R E 1 1 1 0 0 0 0 0 0 1 1 0 0 0 2 2 3 0 0 1 0 0 13 0 1355.7409 E9PK89;Q8TBN0 E9PK89 206 218 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A yes no 2 0.0047085 81.448 By MS/MS By MS/MS 1 1 7696200 4376400 3319700 6548 895 7473 16560;16561 15999;16000 16000 1674 2 TLYSFFSPSPAR ________________ FFSPSPARKRHAPSPE K T L A R K 1 1 0 0 0 0 0 0 0 0 1 0 0 2 2 3 1 0 1 0 0 0 12 0 1371.6823 P13051 P13051 6 17 UNG Uracil-DNA glycosylase yes yes 2 1.372E-10 146.11 By MS/MS By MS/MS 1 1 14142000 7791200 6350400 6549 1691 7474 16562;16563 16001;16002 16002 8228 2 TMCLQRLQPVQPTTK DTTGKSQKTMCLQRLQ QPVQPTTKKDLDTAEK K T M T K K 0 1 0 0 1 3 0 0 0 0 2 1 1 0 2 0 3 0 0 1 0 0 15 1 1799.9386 Q96MP5 Q96MP5 121 135 ZSWIM3 Zinc finger SWIM domain-containing protein 3 yes yes 2 0.024686 56.286 By MS/MS 1 0 0 0 6550 2685 7475 16564 16003 16003 1067 1 TMCPLLSMKPGEYSYFSPR SLGDGDIRTMCPLLSM EYSYFSPRTMSMWAGP R T M P R T 0 1 0 0 1 0 1 1 0 0 2 1 2 1 3 3 1 0 2 0 0 0 19 1 2263.0476 C9J470;E9PHA2;Q15003 C9J470 405 423 NCAPH Condensin complex subunit 2 yes no 3 0.019938 50.608 By MS/MS By matching 1 1 9797400 4416400 5381000 6551 634 7476 16565;16566 16004 16004 249;250 1185 0 TMEVYKIKSDANIAGFSLPGPK IPPYSRMKTMEVYKIK GFSLPGPKADCDKIPS K T M P K A 2 0 1 1 0 0 1 2 0 2 1 3 1 1 2 2 1 0 1 1 0 0 22 2 2365.2352 Q7Z4V0 Q7Z4V0 302 323 ZNF438 Zinc finger protein 438 yes yes 3 0.0092808 49.773 By matching By MS/MS 1 1 8074400 4597400 3477000 6552 2387 7477 16567;16568 16005 16005 963 4852;4853;7689 1 TMFAQVESDDEEAK AYSKTQPKTMFAQVES ESDDEEAKNEPEWKKR K T M A K N 2 0 0 2 0 1 3 0 0 0 0 1 1 1 0 1 1 0 0 1 0 0 14 0 1598.677 Q9NW82 Q9NW82 631 644 WDR70 WD repeat-containing protein 70 yes yes 2 0.00040754 91.789 By matching By MS/MS 1 1 14577000 7349000 7227500 6553 2930 7478 16569;16570 16006 16006 1163 6183 1 TMFAQVESDDEEAKNEPEWK AYSKTQPKTMFAQVES AKNEPEWKKRKI____ K T M W K K 2 0 1 2 0 1 5 0 0 0 0 2 1 1 1 1 1 1 0 1 0 0 20 1 2382.0322 Q9NW82 Q9NW82 631 650 WDR70 WD repeat-containing protein 70 yes yes 2;3 0.00019006 105.5 By MS/MS By MS/MS 4 4 193480000 103130000 90345000 6554 2930 7479;7480 16571;16572;16573;16574;16575;16576;16577;16578 16007;16008;16009;16010;16011;16012 16009 1163 6183 6 TMIISPERLDPFADGGK DEYKKHRRTMIISPER DPFADGGKTPDPKMNA R T M G K T 1 1 0 2 0 0 1 2 0 2 1 1 1 1 2 1 1 0 0 0 0 0 17 1 1845.9295 O75533 O75533 125 141 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.0011112 82.259 By MS/MS By matching 1 1 7228400 4701000 2527500 6555 1549 7481 16579;16580 16013 16013 559 2928 1 TMIISPERLDPFADGGKTPDPK DEYKKHRRTMIISPER GGKTPDPKMNARTYMD R T M P K M 1 1 0 3 0 0 1 2 0 2 1 2 1 1 4 1 2 0 0 0 0 0 22 2 2384.2046 O75533 O75533 125 146 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.014143 66.76 By MS/MS 1 7044200 0 7044200 6556 1549 7482 16581 16014 16014 2928 0 TMLLLSRSPEAQPK VTGASLRRTMLLLSRS RSPEAQPKTLPLTGST R T M P K T 1 1 0 0 0 1 1 0 0 0 3 1 1 0 2 2 1 0 0 0 0 0 14 1 1569.8549 P55265 P55265 818 831 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 2;3 0.00067138 111.5 By MS/MS By MS/MS 2 2 180890000 111830000 69058000 6557 1913 7483 16582;16583;16584;16585 16015;16016;16017;16018 16015 747 3700;3701;7494 4 TMSVSDFNYSR SINEIPERTMSVSDFN VSDFNYSRTSPSKRPN R T M S R T 0 1 1 1 0 0 0 0 0 0 0 0 1 1 0 3 1 0 1 1 0 0 11 0 1305.566 Q96RT1;H0YA04 Q96RT1 1156 1166 ERBB2IP Protein LAP2 yes no 2 0.00064996 89.886 By MS/MS By MS/MS 1 1 9764200 5681100 4083100 6558 2705 7484 16586;16587 16019;16020 16019 1076 5583 2 TMTANKNSSITHGAGGTKAPR ________________ AGGTKAPRGTLS____ M T M P R G 3 1 2 0 0 0 0 3 1 1 0 2 1 0 1 2 4 0 0 0 0 0 21 2 2099.0542 E9PQM5;E9PPS6;E9PM32;E9PJP0;E9PLD7;E9PRS6;E9PI67;E9PI72;E9PKV3;E9PI58;E9PLB6;E9PII1;E9PK36;E9PN93;E9PME1;E9PQA9;E9PNM8;E9PMP1;E9PLH6;E9PMJ9;E9PKN3;E9PJY5;P78524 E9PQM5 2 22 ST5 Suppression of tumorigenicity 5 protein yes no 3 0.030393 47.397 By MS/MS 1 0 0 0 6559 882 7485 16588 16021 16021 332 1 TNEKVELQELNDR NTEFKNTRTNEKVELQ ELQELNDRFANYIDKV R T N D R F 0 1 2 1 0 1 3 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 13 1 1586.79 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;P17661 P08670 101 113 VIM;DES Vimentin;Desmin yes no 3 0.0018023 93.243 By MS/MS 1 27756000 27756000 0 6560 1663 7486 16589 16022 16022 1 TNLSGRQSPSFK EEKEVLLKTNLSGRQS GRQSPSFKLSLSSGTK K T N F K L 0 1 1 0 0 1 0 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 12 1 1320.6786 Q6IN85 Q6IN85 734 745 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 2 0.0031743 89.44 By MS/MS By matching 1 1 35886000 20511000 15375000 6561 2303 7487 16590;16591 16023 16023 4639 1 TNLTSQSSTTNLPGSPGSPGSPGSPGSPGSVPK LSLSSGTKTNLTSQSS GSPGSVPKNTSQTAAI K T N P K N 0 0 2 0 0 1 0 6 0 0 2 1 0 0 7 9 4 0 0 1 0 0 33 0 3036.4636 Q6IN85 Q6IN85 754 786 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 3 0.013009 56.211 By MS/MS By MS/MS 1 2 26492000 8764400 17728000 6562 2303 7488;7489 16592;16593;16594 16024;16025 16024 4640;4641;4642;4643;4644 1 TNNNQILEVKSPIK EPPPPLLKTNNNQILE LEVKSPIKQSKSDKQI K T N I K Q 0 0 3 0 0 1 1 0 0 2 1 2 0 0 1 1 1 0 0 1 0 0 14 1 1596.8835 A0A0D9SF09;B1APT5;P42568 A0A0D9SF09 67 80 MLLT3 Protein AF-9 yes no 2;3 0.0011888 114.06 By MS/MS By MS/MS 2 2 58853000 34440000 24413000 6563 339 7490 16595;16596;16597;16598 16026;16027;16028 16028 599 3 TNQAILSQLYQSPNR FANNPSQKTNQAILSQ QLYQSPNRR_______ K T N N R R 1 1 2 0 0 3 0 0 0 1 2 0 0 0 1 2 1 0 1 0 0 0 15 0 1731.8904 C9JB16;A0A0A0MRX1;Q12926 C9JB16 75 89 ELAVL2 ELAV-like protein;ELAV-like protein 2 yes no 2 0.0038329 91.62 By MS/MS By matching 1 1 8701700 4018000 4683700 6564 234 7491 16599;16600 16029 16029 410 0 TNREDCFESESEDEFYK ANIRSKLRTNREDCFE ESEDEFYKQSWVLPGE R T N Y K Q 0 1 1 2 1 0 5 0 0 0 0 1 0 2 0 2 1 0 1 0 0 0 17 1 2183.859 Q96D09 Q96D09 320 336 GPRASP2 G-protein coupled receptor-associated sorting protein 2 yes yes 3 0.028902 61.345 By MS/MS 1 0 0 0 6565 2634 7492 16601 16030 16030 1 TNSGISSASGGSTEPTTPDSERPAQALLR NNLKSHSRTNSGISSA RPAQALLRDYGSTALN R T N L R D 3 2 1 1 0 1 2 3 0 1 2 0 0 0 3 6 4 0 0 0 0 0 29 1 2886.3955 A0A0J9YW54;A2A2F0;Q86X10 A0A0J9YW54 86 114 RALGAPB Ral GTPase-activating protein subunit beta yes no 3 0.025919 43.302 By MS/MS By matching 1 1 28471000 12423000 16049000 6566 369 7493 16602;16603 16031 16031 677 1 TNSMGSATGPLPGTK SKGSKRVRTNSMGSAT TGPLPGTKVEPTVLDR R T N T K V 1 0 1 0 0 0 0 3 0 0 1 1 1 0 2 2 3 0 0 0 0 0 15 0 1417.6871 O15014 O15014 465 479 ZNF609 Zinc finger protein 609 yes yes 2 0.024271 61.495 By matching By MS/MS 1 1 12694000 6827200 5866600 6567 1466 7494 16604;16605 16032 16032 2734 1 TNSMQQLEQWIK EADRVIQRTNSMQQLE QQLEQWIKIQKGRGHE R T N I K I 0 0 1 0 0 3 1 0 0 1 1 1 1 0 0 1 1 1 0 0 0 0 12 0 1504.7344 A0JP02;B4DJX4;Q9HAU0 A0JP02 166 177 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes no 2 1.9371E-57 203.87 By MS/MS By MS/MS 1 2 28329000 10302000 18026000 6568 439 7495;7496 16606;16607;16608 16033;16034;16035 16035 172 823 3 TNSMSSSGLGSPNR QGIGIPSRTNSMSSSG SGLGSPNRSSPSIICM R T N N R S 0 1 2 0 0 0 0 2 0 0 1 0 1 0 1 5 1 0 0 0 0 0 14 0 1393.6256 F8VQD8;A0A087X050;F8VVY1;F8VUB4;F8VX63;F8VP97;F8VV52;Q9NZN8 F8VQD8 70 83 CNOT2 CCR4-NOT transcription complex subunit 2 yes no 2 3.8185E-07 131.56 By MS/MS By MS/MS 1 2 28008000 9168200 18839000 6569 152 7497;7498 16609;16610;16611 16036;16037;16038 16038 58 246 2 TNSPGFQK FDKPNFNRTNSPGFQK TNSPGFQKKVQFGNEN R T N Q K K 0 0 1 0 0 1 0 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 8 0 877.42938 A0A087X0H9;Q5T8P6 A0A087X0H9 521 528 RBM26 RNA-binding protein 26 yes no 2 0.00013191 154.01 By MS/MS By MS/MS 1 1 31589000 17414000 14175000 6570 154 7499 16612;16613 16039;16040 16039 248 1 TNSSDSERSPDLGHSTQIPR LSKPLSERTNSSDSER GHSTQIPRKVVYDQLN R T N P R K 0 2 1 2 0 1 1 1 1 1 1 0 0 0 2 5 2 0 0 0 0 0 20 1 2183.0203 Q6VY07;B4DF77 Q6VY07 526 545 PACS1 Phosphofurin acidic cluster sorting protein 1 yes no 3 0.00077655 74.618 By MS/MS By MS/MS 1 1 18462000 7897700 10564000 6571 2342 7500 16614;16615 16041;16042 16042 4736;4737;4738 2 TNTMNGSKSPVISRPK PTRKPWERTNTMNGSK SPVISRPKSTPLSQPS R T N P K S 0 1 2 0 0 0 0 1 0 1 0 2 1 0 2 3 2 0 0 1 0 0 16 2 1715.8989 A0A0U1RRM6 A0A0U1RRM6 732 747 yes yes 3 5.4261E-10 136.61 By MS/MS By MS/MS 3 4 75131000 21092000 54038000 6572 400 7501;7502;7503 16616;16617;16618;16619;16620;16621;16622 16043;16044;16045;16046;16047 16047 15 156 740;741 4 TNTPVKEDWNVR TTEVTQPRTNTPVKED VKEDWNVRITKLRKQV R T N V R I 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 0 2 1 0 2 0 0 12 1 1457.7263 P78347 P78347 556 567 GTF2I General transcription factor II-I yes yes 3 0.00025441 110.15 By MS/MS By MS/MS 1 1 47468000 25216000 22253000 6573 1962 7504 16623;16624 16048;16049 16049 7504 2 TPAAAAAMNLASPR AVNLADSRTPAAAAAM AMNLASPRTAVAPSAV R T P P R T 6 1 1 0 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 0 0 14 0 1340.6871 Q9UQ35 Q9UQ35 2261 2274 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 2.4914E-21 159.44 By MS/MS By MS/MS 6 4 1381800000 697000000 684840000 6574 3074 7505;7506 16625;16626;16627;16628;16629;16630;16631;16632;16633;16634 16050;16051;16052;16053;16054;16055;16056;16057;16058;16059;16060;16061;16062;16063;16064;16065;16066 16052 1231 6605 17 TPAALAALSLTGSGTPPTAANYPSSSR AVNLAGARTPAALAAL ANYPSSSRTPQAPASA R T P S R T 6 1 1 0 0 0 0 2 0 0 3 0 0 0 4 5 4 0 1 0 0 0 27 0 2558.2976 Q9UQ35 Q9UQ35 2302 2328 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.00017252 71.903 By MS/MS By MS/MS 1 1 19128000 11583000 7545600 6575 3074 7507 16635;16636 16067;16068;16069 16069 6606;7937 3 TPAAPASPAAVPSEGSGGSTTGWR RARNAAPRTPAAPASP GGSTTGWRAREEQPPS R T P W R A 5 1 0 0 0 0 1 4 0 0 0 0 0 0 4 4 3 1 0 1 0 0 24 0 2211.0556 P07199 P07199 150 173 CENPB Major centromere autoantigen B yes yes 2;3 1.096E-05 102.19 By MS/MS By MS/MS 2 2 217020000 103940000 113080000 6576 1650 7508 16637;16638;16639;16640 16070;16071;16072;16073 16071 3114 4 TPADTGFAFPDWAYKPESSPGSR ________________ PESSPGSRQIQLWHFI K T P S R Q 3 1 0 2 0 0 1 2 0 0 0 1 0 2 4 3 2 1 1 0 0 0 23 1 2483.1394 P50548 P50548 3 25 ERF ETS domain-containing transcription factor ERF yes yes 3 9.8373E-19 151.63 By MS/MS 1 8841700 8841700 0 6577 1868 7509 16641 16074;16075 16075 3629 2 TPAILYTYSGLR PSPKPNNKTPAILYTY LYTYSGLRNRRAAVYV K T P L R N 1 1 0 0 0 0 0 1 0 1 2 0 0 0 1 1 2 0 2 0 0 0 12 0 1353.7293 F5H6M0;F5H047;F5H669;Q8N684;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 F5H6M0 67 78 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 2 0.02325 82.749 By MS/MS 1 0 0 0 6578 956 7510 16642 16076 16076 1800 1 TPASTPVSGTPQASPMIER MNMIEEIKTPASTPVS QASPMIERSNVVRKDY K T P E R S 2 1 0 0 0 1 1 1 0 1 0 0 1 0 4 3 3 0 0 1 0 0 19 0 1925.9517 Q9UHR4 Q9UHR4 248 266 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2;3 5.6881E-58 189.98 By MS/MS By MS/MS 4 4 191460000 79388000 112070000 6579 3006 7511;7512;7513 16643;16644;16645;16646;16647;16648;16649;16650 16077;16078;16079;16080;16081;16082;16083 16079 1197 6335;6336;7901 7 TPDSEDKLFSPVIAR ATECTGGKTPDSEDKL LFSPVIARNLADEIES K T P A R N 1 1 0 2 0 0 1 0 0 1 1 1 0 1 2 2 1 0 0 1 0 0 15 1 1673.8625 R4GNB2;R4GN35;Q5VZ89;X6RAE7;X6R5W5 R4GNB2 1216 1230 DENND4C DENN domain-containing protein 4C yes no 2;3 0.0054387 82.121 By MS/MS By matching 2 1 23936000 17168000 6767500 6580 2281 7514 16651;16652;16653 16084;16085 16084 4582 2 TPDTSTYCYETAEK ETSTKTTRTPDTSTYC YCYETAEKITRTPQAS R T P E K I 1 0 0 1 1 0 2 0 0 0 0 1 0 0 1 1 4 0 2 0 0 0 14 0 1664.6876 P46821 P46821 2034 2047 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.581E-25 163.9 By MS/MS By MS/MS 1 1 44555000 26021000 18534000 6581 1840 7515 16654;16655 16086;16087 16086 7455 2 TPDVFSSSPLHLQPPPLGK LPPREPVRTPDVFSSS LQPPPLGKKSDHGNAF R T P G K K 0 0 0 1 0 1 0 1 1 0 3 1 0 1 5 3 1 0 0 1 0 0 19 0 2016.068 G5E9C8;Q07889 G5E9C8 1207 1225 SOS1 Son of sevenless homolog 1 yes no 3 0.00091312 73.252 By MS/MS By MS/MS 1 1 14870000 5972300 8898000 6582 1099 7516 16656;16657 16088;16089 16089 2078;2079;2080 2 TPEDGDYSYEIIEK ETIGKTTKTPEDGDYS YSYEIIEKTTRTPEEG K T P E K T 0 0 0 2 0 0 3 1 0 2 0 1 0 0 1 1 1 0 2 0 0 0 14 0 1657.7359 P46821 P46821 1932 1945 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 8.4311E-43 187.85 By MS/MS By MS/MS 2 3 210110000 107230000 102880000 6583 1840 7517;7518 16658;16659;16660;16661;16662 16090;16091;16092;16093;16094 16092 3518;8277;8278 5 TPEEGGYSYDISEK EIIEKTTRTPEEGGYS YSYDISEKTTSPPEVS R T P E K T 0 0 0 1 0 0 3 2 0 1 0 1 0 0 1 2 1 0 2 0 0 0 14 0 1573.6784 P46821 P46821 1949 1962 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 2.6623E-43 190.36 By MS/MS By MS/MS 2 2 59089000 27247000 31842000 6584 1840 7519;7520 16663;16664;16665;16666 16095;16096;16097 16097 3519;8279;8280 3 TPEELDDSDFETEDFDVR RKAVLMIRTPEELDDS ETEDFDVRSRTSVQTE R T P V R S 0 1 0 5 0 0 4 0 0 0 1 0 0 2 1 1 2 0 0 1 0 0 18 0 2157.8862 G3XAM7;P35221 G3XAM7 634 651 CTNNA1 Catenin alpha-1 yes no 2;3 8.0281E-144 245.74 By MS/MS By MS/MS 3 4 422170000 364800000 57369000 6585 1093 7521 16667;16668;16669;16670;16671;16672;16673 16098;16099;16100;16101;16102;16103;16104;16105;16106 16099 2054 9 TPEPVVPTAPEPHPTTSTDQPVTPK RTNRSSVKTPEPVVPT TDQPVTPKLTSRATRR K T P P K L 1 0 0 1 0 1 2 0 1 0 0 1 0 0 8 1 6 0 0 3 0 0 25 0 2622.3177 Q14676 Q14676 1608 1632 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 1.4669E-06 88.474 By MS/MS By MS/MS 1 1 24207000 13946000 10261000 6586 2098 7522 16674;16675 16107;16108 16108 7583 2 TPESQPDTPPGTPLVSQDEK TLRWEETRTPESQPDT PLVSQDEKRDAELPKK R T P E K R 0 0 0 2 0 2 2 1 0 0 1 1 0 0 5 2 3 0 0 1 0 0 20 0 2122.0066 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60 A0A0D9SEV0 111 130 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase yes no 2;3 6.5323E-16 149.72 By MS/MS By MS/MS 3 3 57742000 27769000 29973000 6587 336 7523;7524 16676;16677;16678;16679;16680;16681 16109;16110;16111;16112;16113;16114;16115 16115 596;6927;6928 7 TPESQPDTPPGTPLVSQDEKR TLRWEETRTPESQPDT LVSQDEKRDAELPKKR R T P K R D 0 1 0 2 0 2 2 1 0 0 1 1 0 0 5 2 3 0 0 1 0 0 21 1 2278.1077 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60 A0A0D9SEV0 111 131 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase yes no 3 4.7821E-07 129.52 By MS/MS By MS/MS 2 2 89124000 37630000 51494000 6588 336 7525;7526 16682;16683;16684;16685 16116;16117;16118;16119 16119 596;6927;6928 3 TPGDFSYAYQKPEETTR LEKDSGGKTPGDFSYA QKPEETTRSPDEEDYD K T P T R S 1 1 0 1 0 1 2 1 0 0 0 1 0 1 2 1 3 0 2 0 0 0 17 1 1988.9116 P46821 P46821 1864 1880 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 0.00018754 115.58 By MS/MS By MS/MS 4 5 169920000 64605000 105310000 6589 1840 7527;7528 16686;16687;16688;16689;16690;16691;16692;16693;16694 16120;16121;16122;16123;16124;16125;16126 16123 3491;8267;8268 6 TPGHPPPPEIPSELGACDFEKPESPR TSAAGDTRTPGHPPPP FEKPESPRAASSSSPG R T P P R A 1 1 0 1 1 0 4 2 1 1 1 1 0 1 8 2 1 0 0 0 0 0 26 1 2840.3439 Q92538 Q92538 1750 1775 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 4 0.0029143 52.898 By MS/MS 1 7063500 0 7063500 6590 2580 7529 16695 16127 16127 5297 1 TPGVLLPGAGGAAGFGMTSPPPPTSPSR PRPLGFERTPGVLLPG PPPTSPSRTAVPPGLS R T P S R T 3 1 0 0 0 0 0 6 0 0 2 0 1 1 7 3 3 0 0 1 0 0 28 0 2576.3057 Q96L91;F2Z2G7;H9KV84;A0A0A0MR72;A0A0A0MR80;Q6ZTU2 Q96L91 297 324 EP400;EP400NL E1A-binding protein p400;EP400 N-terminal-like protein yes no 3;4 6.878E-10 111.84 By MS/MS By MS/MS 4 4 116600000 59920000 56683000 6591 2681 7530;7531;7532 16696;16697;16698;16699;16700;16701;16702;16703 16128;16129;16130;16131;16132;16133;16134;16135 16134 1065 5539;5540;5541;7798 8 TPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQSK KTNRSSVKTPKPVEPA IAQGGQSKTLRSSTVR K T P S K T 4 0 0 2 0 3 3 2 0 1 1 2 0 1 6 3 4 0 0 2 0 0 34 1 3492.726 Q14676 Q14676 1649 1682 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.01251 44.454 By matching By MS/MS 1 1 36802000 11290000 25511000 6592 2098 7533 16704;16705 16136 16136 4149 1 TPLALAGSPTPK PSSPLLKKTPLALAGS LAGSPTPKNPEDKSPQ K T P P K N 2 0 0 0 0 0 0 1 0 0 2 1 0 0 3 1 2 0 0 0 0 0 12 0 1151.655 B9EGQ5;M0QXA7;O95785 B9EGQ5 170 181 WIZ Protein Wiz yes no 2 1.5992E-06 129.17 By MS/MS By MS/MS 1 1 115220000 61430000 53786000 6593 612 7534 16706;16707 16137;16138 16138 1107 2 TPLANENTTSSPAEPTENRERTANEK EPTEHAERTPLANENT RERTANEKTTQFPAEP R T P E K T 3 2 4 0 0 0 5 0 0 0 1 1 0 0 3 2 5 0 0 0 0 0 26 2 2856.3486 A0A140TA28;E9PEI6;A0A1B0GV46 A0A140TA28 808 833 DPCR1 yes no 3 0.019263 53.444 By MS/MS 1 6504000 6504000 0 6594 407 7535 16708 16139 16139 0 TPLDLFAHFGPEPGDHSDPLPPSAPSPTR KEKGMEGKTPLDLFAH PSAPSPTREGALTPPP K T P T R E 2 1 0 3 0 0 1 2 2 0 3 0 0 2 8 3 2 0 0 0 0 0 29 0 3051.4726 Q8N1G0;F8WCX2 Q8N1G0 158 186 ZNF687 Zinc finger protein 687 yes no 3;4 3.2043E-10 90.601 By MS/MS By MS/MS 2 2 55211000 31364000 23847000 6595 2458 7536 16709;16710;16711;16712 16140;16141;16142;16143 16140 5029;5030;7718 4 TPLGASLDEQSSSTLK AIWLKDCRTPLGASLD EQSSSTLKGVLVRNGG R T P L K G 1 0 0 1 0 1 1 1 0 0 3 1 0 0 1 4 2 0 0 0 0 0 16 0 1632.8206 E9PHV5;P28290 E9PHV5 87 102 SSFA2 Sperm-specific antigen 2 yes no 2 0.018588 64.121 By MS/MS By matching 1 1 10665000 5626200 5038600 6596 880 7537 16713;16714 16144 16144 1637 1 TPLSFTNPLHSDDSDSDER DNTSPLFRTPLSFTNP DDSDSDERNSDGAVTQ R T P E R N 0 1 1 4 0 0 1 0 1 0 2 0 0 1 2 4 2 0 0 0 0 0 19 0 2131.9294 Q05209;H3BM04 Q05209 593 611 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes no 3 0.0057636 72.583 By MS/MS By MS/MS 1 1 20647000 10108000 10539000 6597 2002 7538 16715;16716 16145;16146 16146 3859;3860 1 TPLSPSPMKTPPAAAVSPMQR PAAAAIPRTPLSPSPM AAVSPMQRHSISGPIS R T P Q R H 3 1 0 0 0 1 0 0 0 0 1 1 2 0 6 3 2 0 0 1 0 0 21 1 2163.118 Q69YQ0 Q69YQ0 865 885 SPECC1L Cytospin-A yes yes 3 0.022741 40.15 By MS/MS 1 8346100 8346100 0 6598 2299 7539 16717 16147 16147 919;920 4632 1 TPPAAAALGAPPPLVTAAGPPTPPGPPR LHNGLLARTPPAAAAL PTPPGPPRSRTTPLGG R T P P R S 7 1 0 0 0 0 0 3 0 0 2 0 0 0 11 0 3 0 0 1 0 0 28 0 2538.3958 Q9HCM7 Q9HCM7 989 1016 FBRSL1 Fibrosin-1-like protein yes yes 3;4 0.00032719 62.871 By MS/MS By MS/MS 1 2 20596000 6981500 13614000 6599 2879 7540 16718;16719;16720 16148;16149;16150 16150 7866 3 TPPGALLGAPPPLVPAPRPSSPPR GTPHLLSKTPPGALLG PRPSSPPRGPGPARAD K T P P R G 3 2 0 0 0 0 0 2 0 0 3 0 0 0 10 2 1 0 0 1 0 0 24 1 2341.327 J3KNZ9;Q9HAH7 J3KNZ9 948 971 FBRS Probable fibrosin-1 yes no 3 0.0058739 53.254 By MS/MS By matching 1 1 13211000 8697100 4513800 6600 1324 7541 16721;16722 16151 16151 2454;2455 1 TPPGALLGAPPPLVPAPRPSSPPRGPGPAR GTPHLLSKTPPGALLG PRGPGPARADR_____ K T P A R A 4 3 0 0 0 0 0 4 0 0 3 0 0 0 12 2 1 0 0 1 0 0 30 2 2876.6137 J3KNZ9;Q9HAH7 J3KNZ9 948 977 FBRS Probable fibrosin-1 yes no 4 0.0038897 52.926 By MS/MS By MS/MS 1 1 12747000 6743600 6003500 6601 1324 7542 16723;16724 16152;16153;16154 16153 2454;2455 3 TPPGPPPPDDDEDDPVPLPVSGDKEEDAPHR RPQPRGPRTPPGPPPP KEEDAPHREDYFEPIS R T P H R E 1 1 0 7 0 0 3 2 1 0 1 1 0 0 10 1 1 0 0 2 0 0 31 1 3286.4902 Q69YN4 Q69YN4 184 214 KIAA1429 Protein virilizer homolog yes yes 4 0.00029201 60.279 By MS/MS By MS/MS 1 1 26904000 17181000 9723200 6602 2298 7543 16725;16726 16155;16156;16157 16157 7659 3 TPPSAPSQSRMTSERAPSPSSR LLDRARSRTPPSAPSQ RAPSPSSRMGQAPSQS R T P S R M 2 3 0 0 0 1 1 0 0 0 0 0 1 0 5 7 2 0 0 0 0 0 22 2 2313.1132 Q9UQ35;I3L3Q8 Q9UQ35 2409 2430 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.030696 50.539 By MS/MS 1 0 0 0 6603 3074 7544 16727 16158 16158 7933 1 TPPSTTVGSHSPPETPVLTR PKQDVVGKTPPSTTVG PETPVLTRSSAQTSAA K T P T R S 0 1 0 0 0 0 1 1 1 0 1 0 0 0 5 3 5 0 0 2 0 0 20 0 2060.0538 H7C4X9;A0A087WVZ6;Q9ULU4 H7C4X9 673 692 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.0025712 62.442 By MS/MS By MS/MS 1 1 40298000 25163000 15136000 6604 82 7545 16728;16729 16159;16160;16161 16160 148 3 TPPTAALSAPPPLISTLGGRPVSPR NQNGLLNKTPPTAALS GGRPVSPRRTTPLSAE K T P P R R 3 2 0 0 0 0 0 2 0 1 3 0 0 0 7 3 3 0 0 1 0 0 25 1 2452.3802 A0A087WVB5;Q75MD7;Q8WXX7 A0A087WVB5 939 963 AUTS2 Autism susceptibility gene 2 protein yes no 3;4 5.5634E-10 127.92 By MS/MS By MS/MS 2 1 66329000 41127000 25202000 6605 75 7546 16730;16731;16732 16162;16163;16164 16164 136 3 TPQAPASANLVGPR ANYPSSSRTPQAPASA SANLVGPRSAHATAPV R T P P R S 3 1 1 0 0 1 0 1 0 0 1 0 0 0 3 1 1 0 0 1 0 0 14 0 1377.7365 Q9UQ35 Q9UQ35 2329 2342 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0067914 77.192 By MS/MS By MS/MS 1 1 14228000 7667400 6560200 6606 3074 7547 16733;16734 16165;16166 16165 6607 2 TPQASTYSYETSDLCYTAEKKSPSEAR ETAEKITRTPQASTYS KKSPSEARQDVDLCLV R T P A R Q 3 1 0 1 1 1 3 0 0 0 1 2 0 0 2 5 4 0 3 0 0 0 27 2 3069.3873 P46821 P46821 2051 2077 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.013529 53.589 By MS/MS By matching 1 1 16276000 9448500 6827800 6607 1840 7548 16735;16736 16167 16167 7456 1 TPQGPPEIYSDTQFPSLQSTAK ARLTTTRKTPQGPPEI PSLQSTAKHVESRKDK K T P A K H 1 0 0 1 0 3 1 1 0 1 1 1 0 1 4 3 3 0 1 0 0 0 22 0 2391.1594 Q9UKY7;D6R9V8;H0Y8K3;D6RFH2;D6RDN0 Q9UKY7 182 203 CDV3 Protein CDV3 homolog yes no 2;3 2.7061E-05 116.04 By MS/MS By MS/MS 2 1 48772000 37342000 11429000 6608 3034 7549 16737;16738;16739 16168;16169 16168 6389;8499 2 TPQPCSRPASPEPELLPEADSK RYGATDLRTPQPCSRP LLPEADSKKLPSPARA R T P S K K 2 1 0 1 1 1 3 0 0 0 2 1 0 0 6 3 1 0 0 0 0 0 22 1 2405.1533 Q12756 Q12756 1523 1544 KIF1A Kinesin-like protein KIF1A yes yes 3 0.0089872 51.469 By MS/MS By matching 1 1 25606000 11816000 13790000 6609 2024 7550 16740;16741 16170;16171 16171 3930;3931 2 TPQPGSPSPNTPCLPEAAVSQPGSAVASDWR SRPGCLGRTPQPGSPS SAVASDWRVVVEERIR R T P W R V 4 1 1 1 1 2 1 2 0 0 1 0 0 0 7 5 2 1 0 2 0 0 31 0 3160.4884 Q9Y4R8;H3BU45 Q9Y4R8 632 662 TELO2 Telomere length regulation protein TEL2 homolog yes no 3 0.010564 46.028 By MS/MS By MS/MS 1 1 66495000 36881000 29614000 6610 3122 7551 16742;16743 16172;16173;16174 16173 6690;6691;7952;7953 3 TPQSPAPCVLLR PETAPAARTPQSPAPC PAPCVLLRAQRSLAPE R T P L R A 1 1 0 0 1 1 0 0 0 0 2 0 0 0 3 1 1 0 0 1 0 0 12 0 1337.7126 Q9Y613 Q9Y613 495 506 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.0066323 77.894 By matching By MS/MS 1 1 60079000 30347000 29732000 6611 3141 7552 16744;16745 16175 16175 6724 1 TPQSPTLPPAK VPSEDFERTPQSPTLP SPTLPPAKVAAPNLSR R T P A K V 1 0 0 0 0 1 0 0 0 0 1 1 0 0 4 1 2 0 0 0 0 0 11 0 1135.6237 P78310 P78310 329 339 CXADR Coxsackievirus and adenovirus receptor yes yes 2 6.3966E-15 171.49 By MS/MS By MS/MS 3 3 82299000 46085000 36214000 6612 1959 7553 16746;16747;16748;16749;16750;16751 16176;16177;16178;16179;16180;16181 16176 3742 6 TPSDDEEDNLFAPPK LKEKKERRTPSDDEED DNLFAPPKLTDEDFSP R T P P K L 1 0 1 3 0 0 2 0 0 0 1 1 0 1 3 1 1 0 0 0 0 0 15 0 1673.7421 F8W7U3;E7ESD2;Q641Q2;A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1 F8W7U3 243 257 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 2 0.00080053 107.63 By MS/MS By MS/MS 1 1 21430000 9522300 11908000 6613 814;183 7554 16752;16753 16182;16183 16182 317 2 TPSFLKK SKKKKKFRTPSFLKKS RTPSFLKKSKKKSDS_ R T P K K S 0 0 0 0 0 0 0 0 0 0 1 2 0 1 1 1 1 0 0 0 0 0 7 1 819.48544 P35611;P35612;Q9UEY8 P35611 724 730 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin no no 2 0.025797 106.18 By matching By MS/MS 1 1 138560000 73254000 65308000 6614 1799;2998;1800 7555 16754;16755 16184 16184 3395 1 TPSIQPSLLPHAAPFAK PRHAPVVRTPSIQPSL PHAAPFAKSHLVHGSS R T P A K S 3 0 0 0 0 1 0 0 1 1 2 1 0 1 4 2 1 0 0 0 0 0 17 0 1773.9778 P35658;A0A0A0MSW3;H0YF36 P35658 1021 1037 NUP214 Nuclear pore complex protein Nup214 yes no 2;3 1.3076E-06 130.64 By MS/MS By MS/MS 2 2 49588000 28365000 21222000 6615 1801 7556 16756;16757;16758;16759 16185;16186;16187;16188;16189 16187 3406 5 TPSKPPAQLSPSVPK DLNQEEKKTPSKPPAQ QLSPSVPKRPKLPAPT K T P P K R 1 0 0 0 0 1 0 0 0 0 1 2 0 0 5 3 1 0 0 1 0 0 15 1 1532.8562 F5H8D7;P18887;M0QYS5 F5H8D7 226 240 XRCC1 DNA repair protein XRCC1 yes no 2 0.0071107 79.471 By MS/MS By MS/MS 1 1 11284000 7292100 3991900 6616 988 7557 16760;16761 16190;16191 16191 1859;1860 2 TPSLSSLNSQDSSIEISKLTDKVQAEYR SWQSQTRRTPSLSSLN DKVQAEYRDAYREYIA R T P Y R D 1 1 1 2 0 2 2 0 0 2 3 2 0 0 1 7 2 0 1 1 0 0 28 2 3095.5623 Q9ULH0 Q9ULH0 1357 1384 KIDINS220 Kinase D-interacting substrate of 220 kDa yes yes 3 0.031911 45.579 By MS/MS 1 5784200 0 5784200 6617 3041 7558 16762 16192 16192 0 TPSNTPSAEADWSPGLELHPDYK PRCDDSPRTPSNTPSA LELHPDYKTWGPEQVC R T P Y K T 2 0 1 2 0 0 2 1 1 0 2 1 0 0 4 3 2 1 1 0 0 0 23 0 2511.1554 Q9Y3Z3 Q9Y3Z3 21 43 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 3 9.5228E-05 79.512 By MS/MS By matching 1 1 80719000 43529000 37190000 6618 3114 7559 16763;16764 16193 16193 6676 1 TPSPEPVDKDFYSEFGNK VVLSSLERTPSPEPVD FYSEFGNKTTGKMENY R T P N K T 0 0 1 2 0 0 2 1 0 0 0 2 0 2 3 2 1 0 1 1 0 0 18 1 2055.9426 Q9Y2I1 Q9Y2I1 1282 1299 NISCH Nischarin yes yes 3 0.00014835 106.19 By MS/MS By MS/MS 1 1 6278200 0 6278200 6619 3092 7560 16765;16766 16194;16195 16195 6637;8508 2 TPSPKEEDEEPESPPEKK ASKASKEKTPSPKEED PESPPEKKTSTSPPPE K T P K K T 0 0 0 1 0 0 6 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 18 2 2051.9535 Q9H1E3 Q9H1E3 202 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 8.5927E-05 124.77 By MS/MS By MS/MS 2 2 374250000 224080000 150160000 6620 2816 7561 16767;16768;16769;16770 16196;16197;16198;16199;16200;16201 16201 5891 6 TPSPSPSTALQQFR GGLGDFSRTPSPSPST STALQQFRRKSDSPTS R T P F R R 1 1 0 0 0 2 0 0 0 0 1 0 0 1 3 3 2 0 0 0 0 0 14 0 1515.7682 Q9UQ84;H0YAZ2 Q9UQ84 621 634 EXO1 Exonuclease 1 yes no 2 0.023879 62.633 By matching By MS/MS 1 1 11209000 4703500 6505400 6621 3076 7562 16771;16772 16202 16202 6613 1 TPSQDSDYINANFIK SRVKLTLKTPSQDSDY YINANFIKGVYGPKAY K T P I K G 1 0 2 2 0 1 0 0 0 2 0 1 0 1 1 2 1 0 1 0 0 0 15 0 1711.8053 Q05209;H0YC15 Q05209 81 95 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes no 2 4.9734E-05 122.31 By MS/MS By MS/MS 1 1 18228000 8026600 10201000 6622 2002 7563 16773;16774 16203;16204 16203 3861 2 TPSSCSSSLDSIK VLIKNLSRTPSSCSSS SSSLDSIKADGTSLDF R T P I K A 0 0 0 1 1 0 0 0 0 1 1 1 0 0 1 6 1 0 0 0 0 0 13 0 1367.6239 H0YCZ2;Q8NG31;H0YEY7 H0YCZ2 862 874 CASC5 Protein CASC5 yes no 2 0.020742 65.043 By MS/MS By matching 1 1 14486000 6667800 7818500 6623 1171 7564 16775;16776 16205 16205 2216 1 TPSSDVLVFDYTK NPCIIATKTPSSDVLV VLVFDYTKHPSKPGHT K T P T K H 0 0 0 2 0 0 0 0 0 0 1 1 0 1 1 2 2 0 1 2 0 0 13 0 1470.7242 H0YF10;Q5JP01;E9PC52;Q16576;Q09028 H0YF10 10 22 RBBP4;RBBP7 Histone-binding protein RBBP7;Histone-binding protein RBBP4 yes no 2 0.00062422 108.35 By MS/MS By MS/MS 1 1 3679900 3679900 0 6624 847 7565 16777;16778 16206;16207 16206 1577;7103 1 TPSSEEISPTKFPGLYR EHGSGLTRTPSSEEIS TKFPGLYRTGEPSPPH R T P Y R T 0 1 0 0 0 0 2 1 0 1 1 1 0 1 3 3 2 0 1 0 0 0 17 1 1907.9629 J3QLT3;E7ENF8;Q15311 J3QLT3 27 43 RALBP1 RalA-binding protein 1 yes no 3 0.00012409 103.77 By MS/MS By MS/MS 2 2 50552000 29304000 21249000 6625 796 7566;7567 16779;16780;16781;16782 16208;16209;16210 16209 1421;1422 3 TPSSNTLDDYMSCFR FDPKSICKTPSSNTLD DDYMSCFRTPVVKNDF K T P F R T 0 1 1 2 1 0 0 0 0 0 1 0 1 1 1 3 2 0 1 0 0 0 15 0 1792.7396 P33981 P33981 453 467 TTK Dual specificity protein kinase TTK yes yes 2 0.0012098 99.011 By MS/MS 1 5883300 5883300 0 6626 1789 7568 16783 16211 16211 676 3375 0 TPSSPLQSCTPSLSPR PRSPHASRTPSSPLQS CTPSLSPRSHVPSPHQ R T P P R S 0 1 0 0 1 1 0 0 0 0 2 0 0 0 4 5 2 0 0 0 0 0 16 0 1713.8356 R4GNJ5;A0A0C4DGT6;Q96AP0 R4GNJ5 333 348 ACD Adrenocortical dysplasia protein homolog yes no 2 0.0022091 84.859 By MS/MS By MS/MS 1 1 19529000 8278600 11250000 6627 327 7569 16784;16785 16212;16213 16212 575 2 TPSSQNLLALLAR VPSFDFPKTPSSQNLL NLLALLARQGVVMTPP K T P A R Q 2 1 1 0 0 1 0 0 0 0 4 0 0 0 1 2 1 0 0 0 0 0 13 0 1382.7882 O75385 O75385 636 648 ULK1 Serine/threonine-protein kinase ULK1 yes yes 2 3.3847E-35 185.66 By MS/MS By MS/MS 1 1 39329000 21757000 17572000 6628 1543 7570 16786;16787 16214;16215 16215 2918 2 TPSSSPPITPPASETK SIRNWVTRTPSSSPPI TPPASETKIMSPRKAL R T P T K I 1 0 0 0 0 0 1 0 0 1 0 1 0 0 5 4 3 0 0 0 0 0 16 0 1595.8043 F5GZ90;Q9NZJ0 F5GZ90 466 481 DTL Denticleless protein homolog yes no 2 0.001506 93.226 By MS/MS By MS/MS 2 2 54665000 26744000 27921000 6629 952 7571 16788;16789;16790;16791 16216;16217;16218;16219 16216 1792;1793;7127 4 TPSTVTLNNNSAPANR QKAYNLNRTPSTVTLN NNSAPANRANQNFDEM R T P N R A 2 1 4 0 0 0 0 0 0 0 1 0 0 0 2 2 3 0 0 1 0 0 16 0 1655.8227 Q9ULH0 Q9ULH0 1679 1694 KIDINS220 Kinase D-interacting substrate of 220 kDa yes yes 2 8.7248E-08 134.49 By MS/MS By MS/MS 1 1 19381000 10613000 8768100 6630 3041 7572 16792;16793 16220;16221 16220 6402 1 TPSWAQRDSELDLSMLFDSDETPLFTPSK T P S K 1 1 0 4 0 1 2 0 0 0 4 1 1 2 3 5 3 1 0 0 0 0 29 1 3312.5496 REV__J3KN78 yes no 3 0.023375 41.087 By MS/MS 1 7309400 7309400 0 + 6631 3191 7573 16794 16222 16222 6787;6788 1 TPSYSISSTLNPQAPEFILGCTASK EPSDTLPRTPSYSISS ILGCTASKITPDGITK R T P S K I 2 0 1 0 1 1 1 1 0 2 2 1 0 1 3 5 3 0 1 0 0 0 25 0 2668.3054 Q14694;H3BQC6 Q14694 74 98 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 3 0.0024061 57.768 By MS/MS By MS/MS 1 1 22668000 12344000 10325000 6632 2106 7574 16795;16796 16223;16224 16223 4168;4169 2 TPTHQPPKPGSPGRPACPLSNLLLQSYEER TQEELSARTPTHQPPK LLQSYEERELQQRLLQ R T P E R E 1 2 1 0 1 2 2 2 1 0 4 1 0 0 7 3 2 0 1 0 0 0 30 2 3326.683 Q96F63 Q96F63 202 231 CCDC97 Coiled-coil domain-containing protein 97 yes yes 4 0.0012948 58.858 By MS/MS By matching 1 1 91397000 54547000 36850000 6633 2648 7575 16797;16798 16225 16225 5466 1 TPTPEPAEVETR PVVPPSVKTPTPEPAE EPAEVETRKVVLMQCN K T P T R K 1 1 0 0 0 0 3 0 0 0 0 0 0 0 3 0 3 0 0 1 0 0 12 0 1325.6463 F8W6G1;Q9UHY1 F8W6G1 439 450 NRBP1 Nuclear receptor-binding protein yes no 2 0.0011448 111.72 By MS/MS By MS/MS 1 1 58031000 33598000 24433000 6634 1032 7576 16799;16800 16226;16227 16226 7160 2 TPTPSTPGDTQPNTPAPVPPAEDGIK QPGSPSPKTPTPSTPG PPAEDGIKIEENSLKE K T P I K I 2 0 1 2 0 1 1 2 0 1 0 1 0 0 8 1 5 0 0 1 0 0 26 0 2584.2657 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 1533 1558 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.0047483 53.615 By MS/MS By MS/MS 1 1 41752000 23620000 18132000 6635 319 7577 16801;16802 16228;16229 16228 559;6923;6924;6925 2 TPTSPLK FIQPAAQKTPTSPLKM KTPTSPLKMKPGRPRI K T P L K M 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 1 2 0 0 0 0 0 7 0 742.4225 O60264 O60264 113 119 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.025745 93.178 By MS/MS 1 175360000 175360000 0 6636 1513 7578 16803 16230 16230 2847;7322;7323 1 TPTSSPASSPLVAK KPLHGVLKTPTSSPAS ASSPLVAKKPLTTTPR K T P A K K 2 0 0 0 0 0 0 0 0 0 1 1 0 0 3 4 2 0 0 1 0 0 14 0 1341.714 Q14684 Q14684 728 741 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 1.1874E-53 195.94 By MS/MS By MS/MS 3 3 771000000 403200000 367800000 6637 2102 7579;7580 16804;16805;16806;16807;16808;16809 16231;16232;16233;16234;16235;16236;16237 16231 4158;4159;4160;4161 7 TPTVPDSPGYMGPTR RPPIVPVKTPTVPDSP PGYMGPTRAGSEECVF K T P T R A 0 1 0 1 0 0 0 2 0 0 0 0 1 0 4 1 3 0 1 1 0 0 15 0 1574.7399 A0A087WXN9;Q765P7 A0A087WXN9 594 608 MTSS1L MTSS1-like protein yes no 2 0.0023549 74.698 By MS/MS 1 20936000 0 20936000 6638 112 7581 16810 16238 16238 43 195 1 TPVEAGVSQSDAENAAPSCPDEHDTLPR VAMGKVSRTPVEAGVS DEHDTLPRRRGRPSRR R T P P R R 4 1 1 3 1 1 3 1 1 0 1 0 0 0 4 3 2 0 0 2 0 0 28 0 2949.3047 Q9H4Z2 Q9H4Z2 409 436 ZNF335 Zinc finger protein 335 yes yes 3 0.016386 43.073 By matching By MS/MS 1 1 19176000 11719000 7457400 6639 2835 7582 16811;16812 16239 16239 5950;5951 1 TPVQYSQQQNSPQK LYEPAKMKTPVQYSQQ QQQNSPQKHKNKDLYT K T P Q K H 0 0 1 0 0 5 0 0 0 0 0 1 0 0 2 2 1 0 1 1 0 0 14 0 1631.7903 P46013 P46013 347 360 MKI67 Antigen KI-67 yes yes 2 6.3362E-16 144.88 By MS/MS 1 14327000 0 14327000 6640 1833 7583 16813 16240 16240 3468 1 TPVSGSLKSPVPR ENVKGGEKTPVSGSLK SLKSPVPRSDIPEPER K T P P R S 0 1 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 1 1323.751 H7C477;H0Y7U4;A0A0C4DG98;Q8NI27 H7C477 121 133 THOC2 THO complex subunit 2 yes no 2;3 0.0042422 82.651 By MS/MS By MS/MS 2 2 145040000 84257000 60787000 6641 311 7584 16814;16815;16816;16817 16241;16242;16243;16244;16245 16243 545;546 5 TPYCSSSESQPLQPQKIK LSSNHKQRTPYCSSSE PLQPQKIKLAQKSEIP R T P I K L 0 0 0 0 1 3 1 0 0 1 1 2 0 0 3 4 1 0 1 0 0 0 18 1 2077.015 Q5VWT5 Q5VWT5 63 80 C1orf168 Uncharacterized protein C1orf168 yes yes 3 0.017186 63.062 By MS/MS 1 0 0 0 6642 2277 7585 16818 16246 16246 4570;4571;8368 1 TPYEAYDPIGK APPSGLERTPYEAYDP EAYDPIGKYATATRFS R T P G K Y 1 0 0 1 0 0 1 1 0 1 0 1 0 0 2 0 1 0 2 0 0 0 11 0 1252.5976 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 533 543 KIRREL Kin of IRRE-like protein 1 yes no 2 0.0004979 114.89 By MS/MS By MS/MS 3 3 52485000 27064000 25422000 6643 553 7586;7587 16819;16820;16821;16822;16823;16824 16247;16248;16249;16250;16251 16251 8070;8071 5 TQCIPYSPK SSDSSLFKTQCIPYSP QCIPYSPKGEKRNPIR K T Q P K G 0 0 0 0 1 1 0 0 0 1 0 1 0 0 2 1 1 0 1 0 0 0 9 0 1092.5274 E9PM59;Q9H5J8 E9PM59 34 42 TAF1D TATA box-binding protein-associated factor RNA polymerase I subunit D yes no 2 0.021693 65.179 By matching By MS/MS 1 1 11768000 5608400 6159900 6644 909 7588 16825;16826 16252 16252 1686 1 TQDPSSPGTTPPQAR VEGTPASRTQDPSSPG GTTPPQARQAPAPTVI R T Q A R Q 1 1 0 1 0 2 0 1 0 0 0 0 0 0 4 2 3 0 0 0 0 0 15 0 1538.7325 Q13112 Q13112 424 438 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 7.0653E-222 276.75 By MS/MS By MS/MS 2 2 298720000 146860000 151860000 6645 2041 7589;7590 16827;16828;16829;16830 16253;16254;16255;16256;16257;16258 16255 4008;7547 6 TQEDEEEISTSPGVSEFVSDAFDACNLNQEDLR VVIKSQLKTQEDEEEI NLNQEDLRKEMEQLVL K T Q L R K 2 1 2 4 1 2 6 1 0 1 2 0 0 2 1 4 2 0 0 2 0 0 33 0 3730.6064 Q96A49 Q96A49 259 291 SYAP1 Synapse-associated protein 1 yes yes 3 1.2594E-25 138.08 By MS/MS By MS/MS 1 1 120390000 60935000 59459000 6646 2617 7591 16831;16832 16259;16260;16261 16261 5386;5387 3 TQFEDLVPSPTSEK NVDSEFARTQFEDLVP VPSPTSEKAFLAQIHA R T Q E K A 0 0 0 1 0 1 2 0 0 0 1 1 0 1 2 2 2 0 0 1 0 0 14 0 1576.7621 M0R0C4;M0QZ28;Q9Y4J8 M0R0C4 80 93 DTNA Dystrobrevin alpha yes no 2 9.8473E-11 137.27 By MS/MS By MS/MS 1 2 32936000 15807000 17129000 6647 1412 7592 16833;16834;16835 16262;16263;16264 16262 2591 3 TQLLQDVQDENK RESDLSSKTQLLQDVQ QDVQDENKLFKSQIEQ K T Q N K L 0 0 1 2 0 3 1 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 12 0 1429.7049 Q86UP2;H0YJV5;G3V4Y7 Q86UP2 960 971 KTN1 Kinectin yes no 3 0.022832 47.971 By MS/MS 1 276450 276450 0 6648 2402 7593 16836 16265 16265 0 TQLSPSIKR RSEAQRSKTQLSPSIK QLSPSIKRKREVSPPG K T Q K R K 0 1 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 9 1 1028.5978 H0Y9Y2;Q8NFC6 Q8NFC6 3016 3024 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 no no 2 0.010746 80.24 By MS/MS By MS/MS 1 1 77278000 44490000 32788000 6649 2517;1155 7594 16837;16838 16266;16267 16266 2194 2 TQLSQGRSSPQLDPLR TQDTRSLKTQLSQGRS SPQLDPLRKSPTMEQA K T Q L R K 0 2 0 1 0 3 0 1 0 0 3 0 0 0 2 3 1 0 0 0 0 0 16 1 1781.9384 Q8ND56 Q8ND56 175 190 LSM14A Protein LSM14 homolog A yes yes 3 0.02503 48.371 By MS/MS By matching 1 1 44616000 19645000 24970000 6650 2506 7595 16839;16840 16268 16268 5118;5119 1 TQLWASEPGTPPLPTSLPSQNPILK LIHTLDDRTQLWASEP PSQNPILKNITDYLIE R T Q L K N 1 0 1 0 0 2 1 1 0 1 4 1 0 0 6 3 3 1 0 0 0 0 25 0 2671.4221 Q9BXP5;H7C3A1 Q9BXP5 535 559 SRRT Serrate RNA effector molecule homolog yes no 2;3 3.4522E-20 146.25 By MS/MS By matching 2 2 653740000 313480000 340260000 6651 2772 7596 16841;16842;16843;16844 16269;16270 16270 7834 2 TQMAEVLPSPR GGKAKGKKTQMAEVLP AEVLPSPRGQRVIPRI K T Q P R G 1 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 1 0 0 1 0 0 11 0 1227.6282 P11388 P11388 1205 1215 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0010048 106.76 By MS/MS By MS/MS 1 1 15382000 7198300 8183600 6652 1682 7597 16845;16846 16271;16272 16272 3175 2 TQPDGTSVPGEPASPISQR SITSKLPRTQPDGTSV PASPISQRLPPKVESL R T Q Q R L 1 1 0 1 0 2 1 2 0 1 0 0 0 0 4 3 2 0 0 1 0 0 19 0 1922.9334 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1728 1746 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 1.2677E-43 175.02 By MS/MS By MS/MS 2 1 1092000000 559610000 532430000 6653 118 7598 16847;16848;16849 16273;16274;16275;16276;16277;16278 16277 207 6 TQPSSGVDSAVGTLPATSPQSTSVQAK EAQPPVARTQPSSGVD QSTSVQAKGTNKLRKP R T Q A K G 3 0 0 1 0 3 0 2 0 0 1 1 0 0 3 6 4 0 0 3 0 0 27 0 2600.293 Q13428 Q13428 1094 1120 TCOF1 Treacle protein yes yes 2;3 7.7921E-08 98.015 By MS/MS By MS/MS 2 2 201210000 106370000 94843000 6654 2059 7599 16850;16851;16852;16853 16279;16280;16281;16282;16283 16282 4059;7554 5 TQQLHPVLQKPSVFGNDSDDDDETSVSESLQR YGLILPKKTQQLHPVL SVSESLQREAAKKQAM K T Q Q R E 0 1 1 5 0 4 2 1 1 0 3 1 0 1 2 5 2 0 0 3 0 0 32 1 3570.671 Q9H0G5 Q9H0G5 16 47 NSRP1 Nuclear speckle splicing regulatory protein 1 yes yes 3;4 0.0014325 56.252 By MS/MS By MS/MS 1 2 62021000 18875000 43145000 6655 2802 7600 16854;16855;16856 16284;16285;16286 16284 5858;5859;5860 3 TQQSPISNGSPELGIK KKVGRKPKTQQSPISN GSPELGIKKKPREGKG K T Q I K K 0 0 1 0 0 2 1 2 0 2 1 1 0 0 2 3 1 0 0 0 0 0 16 0 1654.8526 Q15723 Q15723 182 197 ELF2 ETS-related transcription factor Elf-2 yes yes 2 0.020387 62.298 By MS/MS 1 5489700 0 5489700 6656 2153 7601 16857 16287 16287 4276 1 TQSAPLPQNAQALQHLVIQQQHQQFLEK RQHRPLGRTQSAPLPQ QHQQFLEKHKQQFQQQ R T Q E K H 3 0 1 0 0 9 1 0 2 1 4 1 0 1 2 1 1 0 0 1 0 0 28 0 3222.6898 P56524 P56524 465 492 HDAC4 Histone deacetylase 4 yes yes 3 0.022572 40.155 By MS/MS 1 6103700 6103700 0 6657 1917 7602 16858 16288 16288 3710 1 TQSLPVTEK KKHQGVSKTQSLPVTE QSLPVTEKVTENQIPA K T Q E K V 0 0 0 0 0 1 1 0 0 0 1 1 0 0 1 1 2 0 0 1 0 0 9 0 1001.5393 Q9NQW6 Q9NQW6 483 491 ANLN Actin-binding protein anillin yes yes 2 0.012591 74.698 By matching By MS/MS 1 1 83074000 43953000 39121000 6658 2900 7603 16859;16860 16289 16289 6111 1 TQSLSALPK PLPPGKRRTQSLSALP QSLSALPKERDSSSEK R T Q P K E 1 0 0 0 0 1 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 9 0 943.53385 A0A0A0MQR4;I3L2J0;Q96RK0 A0A0A0MQR4 171 179 CIC Protein capicua homolog yes no 2 0.0045128 94.82 By MS/MS By MS/MS 1 1 36301000 21137000 15164000 6659 186 7604 16861;16862 16290;16291 16290 337;6878 2 TQSPEFEAQSSK ESQNTELKTQSPEFEA EFEAQSSKFQEGAEML K T Q S K F 1 0 0 0 0 2 2 0 0 0 0 1 0 1 1 3 1 0 0 0 0 0 12 0 1337.6099 Q9H5H4;H3BS42 Q9H5H4 158 169 ZNF768 Zinc finger protein 768 yes no 2 0.0025079 86.738 By MS/MS By MS/MS 1 1 62090000 33834000 28257000 6660 2838 7605 16863;16864 16292;16293 16293 5966 2 TQTPPLGQTPQLGLK PPSAQPPRTQTPPLGQ QTPQLGLKTNPPLIQE R T Q L K T 0 0 0 0 0 3 0 2 0 0 3 1 0 0 3 0 3 0 0 0 0 0 15 0 1577.8777 E9PKF8;H0Y3P2;D3DQV9;P78344 E9PKF8 11 25 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 2 1.9308E-11 144.15 By MS/MS By MS/MS 1 1 148160000 93940000 54220000 6661 721 7606 16865;16866 16294;16295;16296 16296 7046 3 TQTPPVSPAPQPTEER LEEQARAKTQTPPVSP APQPTEERLPSSPVYE K T Q E R L 1 1 0 0 0 2 2 0 0 0 0 0 0 0 5 1 3 0 0 1 0 0 16 0 1733.8584 Q14247;H0YEV2;H0YCD9 Q14247 399 414 CTTN Src substrate cortactin yes no 2;3 1.3362E-05 125.59 By MS/MS By MS/MS 5 5 537170000 292390000 244780000 6662 2087 7607;7608 16867;16868;16869;16870;16871;16872;16873;16874;16875;16876 16297;16298;16299;16300;16301;16302;16303;16304;16305;16306 16301 4119;7572;7573;7574 9 TQTPPVSPAPQPTEERLPSSPVYEDAASFK LEEQARAKTQTPPVSP YEDAASFKAELSYRGP K T Q F K A 3 1 0 1 0 2 3 0 0 0 1 1 0 1 7 4 3 0 1 2 0 0 30 1 3225.583 Q14247;H0YEV2;H0YCD9 Q14247 399 428 CTTN Src substrate cortactin yes no 3 3.4799E-08 88.278 By MS/MS By MS/MS 6 5 779410000 369930000 409480000 6663 2087 7609;7610;7611;7612 16877;16878;16879;16880;16881;16882;16883;16884;16885;16886;16887 16307;16308;16309;16310;16311;16312;16313;16314;16315;16316;16317;16318;16319;16320;16321 16308 4119;4120;4121;7572;7573;7574;8337 15 TQTPQLHFLDTDDEVSPTSWGDSR PDQKPALKTQTPQLHF PTSWGDSRQAQASYYK K T Q S R Q 0 1 0 4 0 2 1 1 1 0 2 0 0 1 2 3 4 1 0 1 0 0 24 0 2731.2362 Q86US8 Q86US8 469 492 SMG6 Telomerase-binding protein EST1A yes yes 3 3.0231E-06 116.65 By MS/MS By MS/MS 1 1 36894000 16386000 20508000 6664 2403 7613 16888;16889 16322;16323 16323 4904;7696 2 TQVEELSKILQR ESNNQELRTQVEELSK ELSKILQRGRNEDNKK R T Q Q R G 0 1 0 0 0 2 2 0 0 1 2 1 0 0 0 1 1 0 0 1 0 0 12 1 1442.8093 Q8N302 Q8N302 69 80 AGGF1 Angiogenic factor with G patch and FHA domains 1 yes yes 2 0.031714 55.335 By MS/MS By matching 1 1 26774000 15133000 11641000 6665 2464 7614 16890;16891 16324 16324 1 TQVLSPDSLFTAK QRNASYLKTQVLSPDS PDSLFTAKFVAYNEEE K T Q A K F 1 0 0 1 0 1 0 0 0 0 2 1 0 1 1 2 2 0 0 1 0 0 13 0 1405.7453 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948 A8MQ02 1674 1686 MLLT4 Afadin yes no 2 3.2152E-20 171.11 By MS/MS By MS/MS 1 1 54709000 34680000 20030000 6666 494 7615 16892;16893 16325;16326;16327 16327 909 3 TQYNQVPSEDFER SNMEGYSKTQYNQVPS VPSEDFERTPQSPTLP K T Q E R T 0 1 1 1 0 2 2 0 0 0 0 0 0 1 1 1 1 0 1 1 0 0 13 0 1611.7165 P78310 P78310 316 328 CXADR Coxsackievirus and adenovirus receptor yes yes 2 0.00095459 114.72 By matching By MS/MS 1 1 28569000 14388000 14181000 6667 1959 7616 16894;16895 16328;16329 16328 8311 2 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ GLPQGEARTRDDGDEE DADDGALQ________ R T R L Q - 2 1 0 7 0 2 6 3 2 0 4 0 0 0 0 2 3 0 0 0 0 0 32 1 3526.4728 Q9UKM9 Q9UKM9 275 306 RALY RNA-binding protein Raly yes yes 3;4 1.8736E-06 74.525 By MS/MS By MS/MS 2 2 646880000 347800000 299080000 6668 3027 7617 16896;16897;16898;16899 16330;16331;16332;16333 16331 6381;6382 4 TREELVSQGIMPPLKSPAAFHEQR QLKLQQRRTREELVSQ PAAFHEQRRSLERART R T R Q R R 2 2 0 0 0 2 3 1 1 1 2 1 1 1 3 2 1 0 0 1 0 0 24 2 2720.4068 W0Z7M9;B0QY74 W0Z7M9 26 49 mkl1;MKL1 Phosphatase and actin regulator yes no 4 0.0027374 70.315 By MS/MS By MS/MS 1 1 19227000 9724000 9503000 6669 3229 7618 16900;16901 16334;16335 16335 1266 6827 1 TRHSPSEMR SHRSSCERTRHSPSEM RHSPSEMRPGRPSGRN R T R M R P 0 2 0 0 0 0 1 0 1 0 0 0 1 0 1 2 1 0 0 0 0 0 9 1 1099.5193 Q68DN1 Q68DN1 1908 1916 C2orf16 Uncharacterized protein C2orf16 yes yes 1 0.024311 41.164 By MS/MS By matching 1 1 100390000 51270000 49122000 6670 2295 7619 16902;16903 16336 16336 1 TRHSPTPQQSNR PPATPPPKTRHSPTPQ PTPQQSNRTRKSRVSV K T R N R T 0 2 1 0 0 2 0 0 1 0 0 0 0 0 2 2 2 0 0 0 0 0 12 1 1407.6967 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 406 417 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.00024983 103.66 By MS/MS By MS/MS 2 2 200030000 116070000 83956000 6671 511 7620 16904;16905;16906;16907 16337;16338;16339 16338 965 3 TRLSTASEETVQNR PPICLRRRTRLSTASE SEETVQNRVSLEKVLG R T R N R V 1 2 1 0 0 1 2 0 0 0 1 0 0 0 0 2 3 0 0 1 0 0 14 1 1590.7962 O43379;H7C3R4 O43379 46 59 WDR62 WD repeat-containing protein 62 yes no 3 0.00028196 95.854 By MS/MS By MS/MS 1 1 11169000 6539600 4629600 6672 1497 7621 16908;16909 16340;16341 16340 2794;7312 2 TRNSGIWESPELDR SLEHLPPRTRNSGIWE WESPELDRNLAEDASS R T R D R N 0 2 1 1 0 0 2 1 0 1 1 0 0 0 1 2 1 1 0 0 0 0 14 1 1658.8012 O15085 O15085 1292 1305 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 3 0.022244 50.874 By matching By MS/MS 1 1 15934000 11653000 4281400 6673 1472 7622 16910;16911 16342 16342 2750 1 TRPGSFQSLSDALSDTPAK LSSFFRGRTRPGSFQS ALSDTPAKSYAPELGR R T R A K S 2 1 0 2 0 1 0 1 0 0 2 1 0 1 2 4 2 0 0 0 0 0 19 1 1976.9803 G3V4K3;Q9H9C1 G3V4K3 143 161 VIPAS39 Spermatogenesis-defective protein 39 homolog yes no 2;3 8.7815E-11 139.81 By MS/MS By MS/MS 2 2 125850000 60897000 64953000 6674 1082 7623 16912;16913;16914;16915 16343;16344;16345;16346 16344 2038 4 TRSPDVISSASTALSQDIPEIASEALSR LPQASPSRTRSPDVIS IASEALSRGFGSSAPE R T R S R G 4 2 0 2 0 1 2 0 0 3 2 0 0 0 2 7 2 0 0 1 0 0 28 1 2900.4727 Q6P2E9 Q6P2E9 727 754 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 3 0.00065091 64.583 By MS/MS By matching 1 1 141810000 92144000 49666000 6675 2317 7624 16916;16917 16347;16348 16348 7663 2 TRSWDSSSPVDRPEPEAASPTTR SPGPIVSRTRSWDSSS EAASPTTRTRPVTRSM R T R T R T 2 3 0 2 0 0 2 0 0 0 0 0 0 0 4 5 3 1 0 1 0 0 23 2 2528.1892 C9J0I9;Q86WB0 C9J0I9 309 331 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.013155 52.095 By MS/MS By matching 1 1 86792000 52180000 34612000 6676 624 7625 16918;16919 16349 16349 1161;1162;1163;1164;1165 1 TRSYDNLTTACDNTVPLASR PPLSRLPKTRSYDNLT NTVPLASRRCSDPSLN K T R S R R 2 2 2 2 1 0 0 0 0 0 2 0 0 0 1 2 4 0 1 1 0 0 20 1 2254.0648 G5E953;Q13615 G5E953 475 494 MTMR3 Myotubularin-related protein 3 yes no 2;3 8.9288E-11 137.86 By MS/MS By MS/MS 2 2 113960000 59767000 54194000 6677 1096 7626 16920;16921;16922;16923 16350;16351;16352;16353 16350 2059;7181 4 TRTPASINATPANINLADLTR ITPSSSSRTRTPASIN INLADLTRAVNALPQN R T R T R A 4 2 3 1 0 0 0 0 0 2 2 0 0 0 2 1 4 0 0 0 0 0 21 1 2209.1815 Q7KZ85 Q7KZ85 1530 1550 SUPT6H Transcription elongation factor SPT6 yes yes 2;3 2.6264E-07 127.5 By MS/MS By MS/MS 3 3 71147000 36606000 34541000 6678 2363 7627;7628 16924;16925;16926;16927;16928;16929 16354;16355;16356;16357;16358 16356 4788;7678 5 TSADAQEPASPVVSPQQSPPTSPHTWR SHDTVQPRTSADAQEP PTSPHTWRKHSRHPSG R T S W R K 3 1 0 1 0 3 1 0 1 0 0 0 0 0 6 5 3 1 0 2 0 0 27 0 2857.3631 Q96D71;E9PMG1;H0YDT0;F2Z3L2 Q96D71 153 179 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 3 5.4071E-05 79.455 By MS/MS By MS/MS 1 1 11878000 0 11878000 6679 2635 7629;7630 16930;16931 16359;16360;16361 16359 5425;5426;5427;5428;7781 3 TSAGISSGVTSGDSSDSAESSERR TAYLGTHKTSAGISSG SAESSERRKRNRPITN K T S R R K 2 2 0 2 0 0 2 3 0 1 0 0 0 0 0 9 2 0 0 1 0 0 24 1 2329.0266 Q9NSI6 Q9NSI6 1492 1515 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 2 0.03158 45.864 By MS/MS 1 0 0 0 6680 2915 7631 16932 16362 16362 1 TSAQTTPSKIPR PPKSPEGKTSAQTTPS TTPSKIPRYKGQGKKK K T S P R Y 1 1 0 0 0 1 0 0 0 1 0 1 0 0 2 2 3 0 0 0 0 0 12 1 1285.699 O95684 O95684 165 176 FGFR1OP FGFR1 oncogene partner yes yes 3 0.01192 62.162 By MS/MS By matching 1 1 6434600 3418100 3016500 6681 1605 7632 16933;16934 16363 16363 7359 1 TSASEGNPYVSSTLSVPASPR SSGALPYKTSASEGNP LSVPASPRVARKMLLA K T S P R V 2 1 1 0 0 0 1 1 0 0 1 0 0 0 3 6 2 0 1 2 0 0 21 0 2106.0229 E9PDY7;G5E9V3;E9PFQ4;Q86SQ0 E9PDY7 316 336 PHLDB2 Pleckstrin homology-like domain family B member 2 yes no 2;3 0.002503 72.167 By MS/MS By MS/MS 2 3 34369000 12497000 21872000 6682 854 7633 16935;16936;16937;16938;16939 16364;16365;16366;16367;16368 16364 1586 5 TSAVSSPLLDQQR SASKKDRKTSAVSSPL SPLLDQQRNSKTNQSK K T S Q R N 1 1 0 1 0 2 0 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 13 0 1400.726 Q5T200;A0A087WX14 Q5T200 237 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.0014874 106.55 By MS/MS By MS/MS 1 1 79874000 41195000 38678000 6683 2238 7634 16940;16941 16369;16370 16370 4476 2 TSDANETEDHLESLICK GQPHKRRKTSDANETE HLESLICKVGEKSACS K T S C K V 1 0 1 2 1 0 3 0 1 1 2 1 0 0 0 2 2 0 0 0 0 0 17 0 1960.8684 F2Z2T1;Q09161 F2Z2T1 21 37 NCBP1 Nuclear cap-binding protein subunit 1 yes no 3 0.00089987 78.932 By MS/MS By MS/MS 1 1 15762000 6206700 9555300 6684 932 7635 16942;16943 16371;16372 16371 1747;7124 2 TSDIFGSPVTATSR HLNPPGGKTSDIFGSP SPVTATSRLAHPNKPK K T S S R L 1 1 0 1 0 0 0 1 0 1 0 0 0 1 1 3 3 0 0 1 0 0 14 0 1437.71 H3BMT0;H3BTV5;H3BU16;A6NGP5;H3BMV3;Q9H910 H3BMT0 75 88 HN1L Hematological and neurological expressed 1-like protein yes no 2 5.4403E-21 160.63 By MS/MS By MS/MS 1 1 150260000 75655000 74610000 6685 467 7636 16944;16945 16373;16374 16373 862 2 TSDSPWFLSGSETLGR GRTSRPGRTSDSPWFL SGSETLGRLAGNTLGS R T S G R L 0 1 0 1 0 0 1 2 0 0 2 0 0 1 1 4 2 1 0 0 0 0 16 0 1738.8162 E7EMW7;O95071 E7EMW7 107 122 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.0037097 78.326 By matching By MS/MS 1 1 13178000 6947500 6230600 6686 793 7637 16946;16947 16375 16375 1414 1 TSDVGGYYYEK ESYEKTTRTSDVGGYY VGGYYYEKIERTTKSP R T S E K I 0 0 0 1 0 0 1 2 0 0 0 1 0 0 0 1 1 0 3 1 0 0 11 0 1280.5561 P46821 P46821 1898 1908 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 8.4577E-05 123.11 By MS/MS By MS/MS 1 1 27363000 14492000 12871000 6687 1840 7638 16948;16949 16376;16377 16377 8281;8282 2 TSDVGGYYYEKIER ESYEKTTRTSDVGGYY YYYEKIERTTKSPSDS R T S E R T 0 1 0 1 0 0 2 2 0 1 0 1 0 0 0 1 1 0 3 1 0 0 14 1 1678.7839 P46821 P46821 1898 1911 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.004295 62.081 By MS/MS 1 4775400 4775400 0 6688 1840 7639 16950 16378 16378 8281;8282 1 TSEIEPKNSPEDLGLSLTGDSCK SLTVECSKTSEIEPKN SLTGDSCKLMLSTSEY K T S C K L 0 0 1 2 1 0 3 2 0 1 3 2 0 0 2 4 2 0 0 0 0 0 23 1 2476.1639 Q12888;A6NNK5;C9JXV0 Q12888 492 514 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 7.4452E-05 85.248 By MS/MS By MS/MS 1 1 26055000 16634000 9420200 6689 2031 7640 16951;16952 16379;16380;16381 16381 3960 3 TSFSVGSDDELGPIR LGRFASYRTSFSVGSD DDELGPIRKKEEDQAS R T S I R K 0 1 0 2 0 0 1 2 0 1 1 0 0 1 1 3 1 0 0 1 0 0 15 0 1578.7526 Q9NRY4 Q9NRY4 1173 1187 ARHGAP35 Rho GTPase-activating protein 35 yes yes 2 5.0397E-21 157.37 By MS/MS By MS/MS 2 2 118830000 63167000 55665000 6690 2911 7641;7642 16953;16954;16955;16956 16382;16383;16384 16383 6139;6140;6141 3 TSGAPGSPQTPPER PVALEEAKTSGAPGSP SPQTPPERHDSGGSLP K T S E R H 1 1 0 0 0 1 1 2 0 0 0 0 0 0 4 2 2 0 0 0 0 0 14 0 1380.6634 K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4;K7ESM2 K7ELS4 23 36 HEXIM2 Protein HEXIM2 yes no 2 0.020705 64.675 By matching By MS/MS 1 1 9780600 4265100 5515500 6691 1368 7643 16957;16958 16385 16385 2537 1 TSGGDHAPDSPSGENSPAPQGR DERLQRHRTSGGDHAP NSPAPQGRLAEVQDSS R T S G R L 2 1 1 2 0 1 1 4 1 0 0 0 0 0 4 4 1 0 0 0 0 0 22 0 2119.9155 E9PL60;E9PII7;H0YDE3;H0YDU2;E9PRI1;Q96NY9 E9PL60 11 32 MUS81 Crossover junction endonuclease MUS81 yes no 3 3.7477E-05 92.897 By matching By MS/MS 1 1 10162000 6076400 4085200 6692 883 7644 16959;16960 16386 16386 1639 1 TSGLPANPSPGPAPQATSVK SLQDISSKTSGLPANP APQATSVKLPTPMQSL K T S V K L 3 0 1 0 0 1 0 2 0 0 1 1 0 0 5 3 2 0 0 1 0 0 20 0 1875.969 Q9P2N6 Q9P2N6 765 784 KANSL3 KAT8 regulatory NSL complex subunit 3 yes yes 2 0.00042277 108.45 By MS/MS By MS/MS 1 1 17372000 7395400 9976800 6693 2985 7645 16961;16962 16387;16388 16388 6282;7897 2 TSIIATISPASLNLEETLSTLEYAHR DSLGGRTRTSIIATIS STLEYAHRAKNILNKP R T S H R A 3 1 1 0 0 0 3 0 1 3 4 0 0 0 1 4 4 0 1 0 0 0 26 0 2829.476 P52732 P52732 330 355 KIF11 Kinesin-like protein KIF11 yes yes 3 0.011839 70.994 By matching By MS/MS 1 1 12285000 10179000 2106100 6694 1889 7646 16963;16964 16389 16389 1 TSIVQAAAGGVPGGGSNNGK TPTPLQSRTSIVQAAA GGGSNNGKTPVCHQCH R T S G K T 3 0 2 0 0 1 0 6 0 1 0 1 0 0 1 2 1 0 0 2 0 0 20 0 1740.8755 Q9NR12 Q9NR12 259 278 PDLIM7 PDZ and LIM domain protein 7 yes yes 2 0.030889 57.41 By MS/MS By matching 1 1 8595400 4067200 4528200 6695 2904 7647 16965;16966 16390 16390 0 TSLDIEEYSDTEVQK ________________ YSDTEVQKNQVLTLEE R T S Q K N 0 0 0 2 0 1 3 0 0 1 1 1 0 0 0 2 2 0 1 1 0 0 15 0 1755.8051 P51580 P51580 6 20 TPMT Thiopurine S-methyltransferase yes yes 2 4.222E-05 91.123 By MS/MS By matching 1 1 10897000 5689700 5207400 6696 1876 7648 16967;16968 16391 16391 3636 0 TSLMSAESPTPR EEEVCDERTSLMSAES SAESPTPRSCQEGRQG R T S P R S 1 1 0 0 0 0 1 0 0 0 1 0 1 0 2 3 2 0 0 0 0 0 12 0 1275.6129 E5RHT1;B1AP22;P49810 E5RHT1 18 29 PSEN2 Presenilin;Presenilin-2;Presenilin-2 NTF subunit;Presenilin-2 CTF subunit yes no 2 0.00025765 100.11 By MS/MS By MS/MS 2 2 42121000 22677000 19444000 6697 529 7649;7650 16969;16970;16971;16972 16392;16393;16394 16393 209 992;993;994 2 TSLPTVGPSGLYSPSTNR HSIVQATRTSLPTVGP LYSPSTNRGPIQMKIP R T S N R G 0 1 1 0 0 0 0 2 0 0 2 0 0 0 3 4 3 0 1 1 0 0 18 0 1832.9268 Q6VMQ6 Q6VMQ6 887 904 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 2 0.0026439 78.225 By MS/MS By MS/MS 1 1 24887000 12870000 12017000 6698 2341 7651 16973;16974 16395;16396 16395 4734;7673 2 TSMGGTQQQFVEGVR AHQDTQRRTSMGGTQQ QQFVEGVRMEEIVEGC R T S V R M 0 1 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 15 0 1623.7675 B4DGU4;P35222 B4DGU4 544 558 CTNNB1 Catenin beta-1 yes no 2 0.0013119 99.671 By MS/MS By MS/MS 2 2 69531000 37136000 32395000 6699 550 7652;7653 16975;16976;16977;16978 16397;16398;16399;16400 16400 218 1025;6989;6990 4 TSMIQHDK QSKLFSLKTSMIQHDK TSMIQHDKLNLGPAIK K T S D K L 0 0 0 1 0 1 0 0 1 1 0 1 1 0 0 1 1 0 0 0 0 0 8 0 958.45422 Q68DL7 Q68DL7 473 480 C18orf63 Uncharacterized protein C18orf63 yes yes 1 0.023291 43.442 By MS/MS By matching 1 1 36082000 15577000 20505000 6700 2294 7654 16979;16980 16401 16401 917 4615 1 TSNGDLSDSTVSADPVVK KEKEEETKTSNGDLSD VSADPVVK________ K T S V K - 1 0 1 3 0 0 0 1 0 0 1 1 0 0 1 4 2 0 0 3 0 0 18 0 1790.8534 A0A087X256;Q2M389 A0A087X256 1157 1174 KIAA1033 WASH complex subunit 7 yes no 2 0.014403 62.468 By MS/MS By matching 1 1 9696600 6636400 3060300 6701 173 7655 16981;16982 16402 16402 283 1 TSPKPAVVETVTTAKPQQIQALMDEVTK RFGGGQAKTSPKPAVV ALMDEVTKQV______ K T S T K Q 3 0 0 1 0 3 2 0 0 1 1 3 1 0 3 1 5 0 0 4 0 0 28 2 3009.6056 H0YI94;H0YIP0;P56192 H0YI94 90 117 MARS Methionine--tRNA ligase, cytoplasmic yes no 3;4 1.1269E-71 186.05 By MS/MS By MS/MS 4 4 216280000 110550000 105730000 6702 1191 7656;7657 16983;16984;16985;16986;16987;16988;16989;16990 16403;16404;16405;16406;16407;16408;16409 16405 435 2232;7219 7 TSPLKDNPSPEPQLDDIKR TKPPVGPKTSPLKDNP PQLDDIKRELRAEVDI K T S K R E 0 1 1 3 0 1 1 0 0 1 2 2 0 0 4 2 1 0 0 0 0 0 19 2 2149.1015 Q96JC9 Q96JC9 157 175 EAF1 ELL-associated factor 1 yes yes 3 0.0032881 74.278 By MS/MS By matching 1 1 40528000 24162000 16366000 6703 2671 7658 16991;16992 16410;16411 16411 5503;7794 2 TSPPLLDR AYERVSGRTSPPLLDR TSPPLLDRARSRTPPS R T S D R A 0 1 0 1 0 0 0 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 8 0 897.49198 Q9UQ35 Q9UQ35 2397 2404 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.024539 68.847 By MS/MS 1 503260000 503260000 0 6704 3074 7659 16993 16412 16412 6608 1 TSPQVLGSILK KAYELEKRTSPQVLGS QVLGSILKSGTTSESG R T S L K S 0 0 0 0 0 1 0 1 0 1 2 1 0 0 1 2 1 0 0 1 0 0 11 0 1141.6707 Q7Z417 Q7Z417 571 581 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.013218 70.552 By MS/MS By MS/MS 1 1 40201000 23058000 17143000 6705 2380 7660 16994;16995 16413;16414 16413 4836 2 TSPSGGTWSSVVSGAK AATPPVARTSPSGGTW SSVVSGAKDSRLQDQR R T S A K D 1 0 0 0 0 0 0 3 0 0 0 1 0 0 1 5 2 1 0 2 0 0 16 0 1506.7314 F8W0B5 F8W0B5 110 125 ATXN2 no no 2 0.0068318 80.318 By MS/MS By MS/MS 1 1 20064000 11442000 8622300 6706 1029 7661 16996;16997 16415;16416 16416 1928;7159 2 TSPSGGTWSSVVSGVPR AATPPVARTSPSGGTW SVVSGVPRLSPKTHRP R T S P R L 0 1 0 0 0 0 0 3 0 0 0 0 0 0 2 5 2 1 0 3 0 0 17 0 1659.8216 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700 H0YH87 587 603 ATXN2 Ataxin-2 yes no 2;3 0.00078365 101.3 By MS/MS By MS/MS 1 2 96329000 49230000 47099000 6707 1002 7662 16998;16999;17000 16417;16418;16419 16418 1889;7151 3 TSPSSPAPLPHQEATPR SADRKAERTSPSSPAP PHQEATPRASKGAQAG R T S P R A 2 1 0 0 0 1 1 0 1 0 1 0 0 0 5 3 2 0 0 0 0 0 17 0 1771.8853 P04920 P04920 169 185 SLC4A2 Anion exchange protein 2 yes yes 2 0.002573 79.317 By MS/MS By MS/MS 1 1 19453000 12606000 6846800 6708 1636 7663 17001;17002 16420;16421 16420 3090 2 TSPTNEKTQLGK NILDYFRKTSPTNEKT NEKTQLGKECKIKSPE K T S G K E 0 0 1 0 0 1 1 1 0 0 1 2 0 0 1 1 3 0 0 0 0 0 12 1 1302.6779 A0A075B754;Q96QE3 A0A075B754 69 80 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.030837 45.28 By MS/MS 1 0 0 0 6709 18 7664 17003 16422 16422 1 TSPTVATQTGASATSTR GGGNAAARTSPTVATQ GASATSTRGTSPTRSA R T S T R G 3 1 0 0 0 1 0 1 0 0 0 0 0 0 1 3 6 0 0 1 0 0 17 0 1635.8064 Q6P1L5 Q6P1L5 105 121 FAM117B Protein FAM117B yes yes 2 0.0057266 81.526 By MS/MS By matching 1 1 44514000 20803000 23711000 6710 2315 7665 17004;17005 16423 16423 4671;7662 1 TSPVVAPTSEPSSPLHTQLLKDPEPAFQR LDTLEPLKTSPVVAPT DPEPAFQRSASTAGDI K T S Q R S 2 1 0 1 0 2 2 0 1 0 3 1 0 1 6 4 3 0 0 2 0 0 29 1 3128.6142 B7ZM87;A2RUF3;O75044 B7ZM87 981 1009 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 yes no 3;4 3.7436E-05 72.654 By MS/MS By MS/MS 2 2 54239000 26051000 28188000 6711 455 7666 17006;17007;17008;17009 16424;16425;16426;16427;16428 16428 849;850;6963 5 TSQCSSPSLSASPGSPTRPQIR GRPRTGLKTSQCSSPS SPTRPQIRQKIENKPL K T S I R Q 1 2 0 0 1 2 0 1 0 1 1 0 0 0 4 7 2 0 0 0 0 0 22 1 2300.1179 P37275;H0YMD3;H0YND9 P37275 308 329 ZEB1 Zinc finger E-box-binding homeobox 1 yes no 3 0.030902 41.485 By MS/MS 1 6835100 6835100 0 6712 1804 7667 17010 16429 16429 1 TSQEELLAEVVQGQSRTPR LPVAPRTRTSQEELLA QGQSRTPRISPPIKEE R T S P R I 1 2 0 0 0 3 3 1 0 0 2 0 0 0 1 2 2 0 0 2 0 0 19 1 2127.092 H0YJA2;Q6PJT7;A0A087WTC9;G3V5I6;G3V256 H0YJA2 305 323 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 3 0.030393 45.876 By matching By MS/MS 1 1 11333000 5741400 5591200 6713 1195 7668 17011;17012 16430 16430 1 TSQLDNGMRDQMSFLLWSK LWDANTNKTSQLDNGM MSFLLWSKVGSFLAVG K T S S K V 0 1 1 2 0 2 0 1 0 0 3 1 2 1 0 3 1 1 0 0 0 0 19 1 2256.0667 D6RE75;D6R9P6;Q8NEZ3 D6RE75 30 48 WDR19 WD repeat-containing protein 19 yes no 3 0.030182 47.855 By MS/MS 1 0 0 0 6714 730 7669 17013 16431 16431 279 1 TSQVGAASAPAKESPR LQAKASGKTSQVGAAS APAKESPRKGAAPAPP K T S P R K 4 1 0 0 0 1 1 1 0 0 0 1 0 0 2 3 1 0 0 1 0 0 16 1 1555.7954 J3KQ96;E7ETY2;Q13428 J3KQ96 368 383 TCOF1 Treacle protein no no 2;3 2.7141E-10 141.3 By MS/MS By MS/MS 2 2 1341300000 616660000 724650000 6715 822;2059 7670 17014;17015;17016;17017 16432;16433;16434;16435 16434 1493 4 TSQVGAASAPAKESPRK LQAKASGKTSQVGAAS PAKESPRKGAAPAPPG K T S R K G 4 1 0 0 0 1 1 1 0 0 0 2 0 0 2 3 1 0 0 1 0 0 17 2 1683.8904 J3KQ96;E7ETY2;Q13428 J3KQ96 368 384 TCOF1 Treacle protein no no 3 0.0025292 81.665 By MS/MS By matching 1 1 8783300 5468600 3314700 6716 822;2059 7671 17018;17019 16436 16436 1493 1 TSRPENAIIYNNNEDFQVGQAK TKGICFIRTSRPENAI DFQVGQAKVVLKSKDD R T S A K V 2 1 4 1 0 2 2 1 0 2 0 1 0 1 1 1 1 0 1 1 0 0 22 1 2507.2041 A0A0B4J1R6;P29401 A0A0B4J1R6 306 327 TKT Transketolase yes no 3 0.010968 50.132 By matching By MS/MS 1 1 7998400 3330200 4668200 6717 285 7672 17020;17021 16437 16437 1 TSSACHILINNPINACELSPK KMHRRRSRTSSACHIL NACELSPKGKEQAMDL R T S P K G 2 0 3 0 2 0 1 0 1 3 2 1 0 0 2 3 1 0 0 0 0 0 21 0 2338.141 O43303 O43303 382 402 CCP110 Centriolar coiled-coil protein of 110 kDa yes yes 3 0.02058 45.328 By MS/MS 1 6323200 0 6323200 6718 1493 7673 17022 16438 16438 2789 1 TSSAELSTSAPDEPLLQK LTGVSTIRTSSAELST PDEPLLQKSPSESFIG R T S Q K S 2 0 0 1 0 1 2 0 0 0 3 1 0 0 2 4 2 0 0 0 0 0 18 0 1872.9317 Q15139 Q15139 217 234 PRKD1 Serine/threonine-protein kinase D1 yes yes 2 0.00024145 119.04 By MS/MS By MS/MS 1 1 58081000 35399000 22681000 6719 2129 7674 17023;17024 16439;16440 16440 4211;4212;7592 2 TSSAFVGKTPEASPEPK DSMETEEKTSSAFVGK PEASPEPKDQTLKMIK K T S P K D 2 0 0 0 0 0 2 1 0 0 0 2 0 1 3 3 2 0 0 1 0 0 17 1 1731.8679 A0A087WW66;Q99460 A0A087WW66 303 319 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 2 5.3949E-10 139.78 By MS/MS By matching 1 1 38717000 17783000 20934000 6720 85 7675 17025;17026 16441 16441 151;6850 1 TSSDDESEEDEDDLLQR WAETTKRKTSSDDESE DEDDLLQRTGNFISTS K T S Q R T 0 1 0 5 0 1 4 0 0 0 2 0 0 0 0 3 1 0 0 0 0 0 17 0 1981.7872 Q9Y5J1 Q9Y5J1 204 220 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 2 0.0060124 89.629 By MS/MS 1 0 0 0 6721 3129 7676 17027 16442 16442 6703;6704;6705;7955 1 TSSDSALHTSVMNPSPQDTYPGPTPPSILPSR RLPSALNRTSSDSALH PPSILPSRRGGILDGE R T S S R R 1 1 1 2 0 1 0 1 1 1 2 0 1 0 7 7 4 0 1 1 0 0 32 0 3336.5932 Q53ET0;H0YDQ8 Q53ET0 169 200 CRTC2 CREB-regulated transcription coactivator 2 yes no 3 0.0001436 61.911 By MS/MS By matching 1 1 22277000 11638000 10639000 6722 2200 7677 17028;17029 16443 16443 4406;7630 1 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK PGGSGRARTSSFAEPG PGGTGGGKASVGAMGG R T S G K A 2 0 0 0 0 0 1 18 0 0 0 1 0 1 3 4 2 0 0 0 0 0 32 0 2432.0589 P49840 P49840 19 50 GSK3A Glycogen synthase kinase-3 alpha yes yes 2 1.2366E-07 80.733 By MS/MS By matching 1 1 54411000 30547000 23864000 6723 1861 7678 17030;17031 16444 16444 3616 1 TSSFTEQLDEGTPNR TPTRMRSRTSSFTEQL LDEGTPNRESGDTQSF R T S N R E 0 1 1 1 0 1 2 1 0 0 1 0 0 1 1 2 3 0 0 0 0 0 15 0 1680.7591 Q13439;E7EVX2;Q86W71;C9J0Y3;C9JHJ5 Q13439 39 53 GOLGA4 Golgin subfamily A member 4 yes no 2 5.5818E-43 185.66 By MS/MS By MS/MS 1 1 152990000 74360000 78629000 6724 2060 7679 17032;17033 16445;16446;16447 16446 4061 3 TSSGDPPSPLVK GIARTPMKTSSGDPPS DPPSPLVKQLSEVFET K T S V K Q 0 0 0 1 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 1 0 0 12 0 1183.6085 Q99618;F5GX58;F8WDL1 Q99618 80 91 CDCA3 Cell division cycle-associated protein 3 yes no 2 0.015317 68.847 By MS/MS By MS/MS 1 1 25919000 13811000 12108000 6725 2728 7680 17034;17035 16448;16449 16449 5665 2 TSSGTSLSAMHSSGSSGK SKASSLHRTSSGTSLS HSSGSSGKGAGPLRGK R T S G K G 1 0 0 0 0 0 0 3 1 0 1 1 1 0 0 8 2 0 0 0 0 0 18 0 1667.7421 Q12888;A6NNK5;M0R142 Q12888 1315 1332 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.011653 72.489 By matching By MS/MS 1 1 22931000 14036000 8895400 6726 2031 7681 17036;17037 16450 16450 3973;7540 1 TSSIADEGTYTLDSILR KPTGLRKRTSSIADEG YTLDSILRQLNSFHSV R T S L R Q 1 1 0 2 0 0 1 1 0 2 2 0 0 0 0 3 3 0 1 0 0 0 17 0 1840.9054 E7ERV5;A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1 E7ERV5 380 396 MYO5A Unconventional myosin-Va yes no 2 3.3356E-32 170.35 By MS/MS By MS/MS 1 1 29859000 14709000 15150000 6727 117 7682 17038;17039 16451;16452 16452 204 2 TSSKESSPIPSPTSDRK VNGATEQRTSSKESSP PSPTSDRKAKTALPAQ R T S R K A 0 1 0 1 0 0 1 0 0 1 0 2 0 0 3 6 2 0 0 0 0 0 17 2 1802.901 A0A087WUZ3;Q01082 A0A087WUZ3 2161 2177 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.018158 53.059 By matching By MS/MS 1 1 17535000 7702400 9832500 6728 67 7683 17040;17041 16453 16453 120;121;125 1 TSSLAPVVGTTTTTPSPSAIK SRLASKTKTSSLAPVV TPSPSAIKAAAKSAAL K T S I K A 2 0 0 0 0 0 0 1 0 1 1 1 0 0 3 4 6 0 0 2 0 0 21 0 2015.0787 Q92733 Q92733 226 246 PRCC Proline-rich protein PRCC yes yes 2;3 1.7033E-11 140.56 By MS/MS By MS/MS 2 2 98739000 55338000 43401000 6729 2597 7684 17042;17043;17044;17045 16454;16455;16456;16457;16458;16459 16458 5336;7763 6 TSSLDGAAVAVLSR GPGLPAHRTSSLDGAA AAVAVLSRTAPTGPGS R T S S R T 3 1 0 1 0 0 0 1 0 0 2 0 0 0 0 3 1 0 0 2 0 0 14 0 1345.7201 D6R9V6;A6NJ38;A6NHM7;Q7Z5H3 D6R9V6 226 239 ARHGAP22 Rho GTPase-activating protein 22 yes no 2 0.0019608 87.932 By MS/MS By MS/MS 1 1 15451000 8709200 6741400 6730 471 7685 17046;17047 16460;16461 16460 864 2 TSSLDNEGPHPDLLSFE GSPPPQARTSSLDNEG HPDLLSFE________ R T S F E - 0 0 1 2 0 0 2 1 1 0 3 0 0 1 2 3 1 0 0 0 0 0 17 0 1856.8428 A1L170 A1L170 256 272 C1orf226 Uncharacterized protein C1orf226 yes yes 2 0.00029048 112.57 By MS/MS By MS/MS 1 1 28669000 16213000 12456000 6731 443 7686 17048;17049 16462;16463 16463 826 2 TSSLEKLSR ESERVWTRTSSLEKLS SSLEKLSRDILASTPQ R T S S R D 0 1 0 0 0 0 1 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 9 1 1019.5611 Q9BZV3 Q9BZV3 787 795 IMPG2 Interphotoreceptor matrix proteoglycan 2 yes yes 1 0.023828 47.657 By matching By MS/MS 1 1 32770000 17572000 15199000 6732 2786 7687 17050;17051 16464 16464 5793 1 TSSTDEVLSLEEK ELKAPRARTSSTDEVL EVLSLEEKDLRDRERR R T S E K D 0 0 0 1 0 0 3 0 0 0 2 1 0 0 0 3 2 0 0 1 0 0 13 0 1436.6882 K7ENH8;A0A0A0MRB7;K7EMM4 K7ENH8 191 203 TCF3 yes no 2 8.3513E-06 125.61 By MS/MS By MS/MS 1 1 27421000 15682000 11739000 6733 207 7688 17052;17053 16465;16466 16466 369 2 TSSTDLSDIPALPANPIPVIK ASLLASQKTSSTDLSD ANPIPVIKNSIKLRLN K T S I K N 2 0 1 2 0 0 0 0 0 3 2 1 0 0 4 3 2 0 0 1 0 0 21 0 2148.1678 G3XAH6;P51003 G3XAH6 695 715 PAPOLA Poly(A) polymerase alpha yes no 2 1.4126E-34 166.21 By MS/MS By MS/MS 1 1 76167000 39499000 36668000 6734 1090 7689 17054;17055 16467;16468 16467 2052;7176;7177 2 TSSTLSEDQMSR EPTKTPGRTSSTLSED LSEDQMSRLAKQK___ R T S S R L 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 4 2 0 0 0 0 0 12 0 1340.5878 K7ENH3;K7EIV6;K7EKH3;A8MYT4;Q8NEB9 K7ENH3 118 129 PIK3C3 Phosphatidylinositol 3-kinase;Phosphatidylinositol 3-kinase catalytic subunit type 3 yes no 2 0.026334 51.546 By MS/MS 1 0 0 0 6735 505 7690 17056 16469 16469 922;923;924 1 TSSTNEDEDLNPEQK IKVSSRGRTSSTNEDE EDLNPEQKIEREKERR R T S Q K I 0 0 2 2 0 1 3 0 0 0 1 1 0 0 1 2 2 0 0 0 0 0 15 0 1705.7279 Q99081;B4DZP2;F5GY10;B4DGI9 Q99081 557 571 TCF12 Transcription factor 12 yes no 2 0.018811 74.698 By matching By MS/MS 1 1 17966000 11039000 6927700 6736 2718 7691 17057;17058 16470 16470 5645 1 TSSVLGMSVESAPAVEEEKGEELEQK EQLPQPNRTSSVLGMS KGEELEQKEKEKEEDT R T S Q K E 2 0 0 0 0 1 7 2 0 0 2 2 1 0 1 4 1 0 0 3 0 0 26 1 2762.3168 Q12888;A6NNK5;C9JXV0 Q12888 117 142 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 1.2926E-06 109.08 By MS/MS By MS/MS 2 2 50660000 27672000 22989000 6737 2031 7692;7693 17059;17060;17061;17062 16471;16472;16473 16473 809 3974;3975;7541 3 TSSVPEYVYNLHLVENDFVGGR VGNGNLHRTSSVPEYV ENDFVGGRSPVPKTYD R T S G R S 0 1 2 1 0 0 2 2 1 0 2 0 0 1 1 2 1 0 2 4 0 0 22 0 2494.2129 Q99959 Q99959 80 101 PKP2 Plakophilin-2 yes yes 3 0.0053167 55.171 By MS/MS By matching 1 1 7661900 3812900 3849000 6738 2736 7694 17063;17064 16474 16474 5676 1 TSSVSNPQDSVGSPCSR PVYGSSAKTSSVSNPQ SVGSPCSRVGEEEHVY K T S S R V 0 1 1 1 1 1 0 1 0 0 0 0 0 0 2 6 1 0 0 2 0 0 17 0 1763.7744 F5GZ78;A0A1B0GTU4;P49023;F5H836;A0A1B0GU60 F5GZ78 92 108 PXN Paxillin yes no 2 1.2694E-06 130.77 By MS/MS By MS/MS 1 1 21871000 11648000 10223000 6739 414 7695 17065;17066 16475;16476 16476 771 1 TSSVSSISQVSPER QEGTLKRKTSSVSSIS ISQVSPERGMPPPSSP K T S E R G 0 1 0 0 0 1 1 0 0 1 0 0 0 0 1 6 1 0 0 2 0 0 14 0 1462.7264 P42356 P42356 255 268 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.0043903 81.327 By MS/MS By MS/MS 2 2 24903000 9780600 15123000 6740 1825 7696 17067;17068;17069;17070 16477;16478;16479 16478 3439;3440;3441 3 TSSVVTLEVAK RAAELMTRTSSVVTLE VVTLEVAKQGAIYHGL R T S A K Q 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 2 2 0 0 3 0 0 11 0 1132.634 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1040 1050 MLLT4 Afadin yes no 2 0.0014898 102.87 By MS/MS By MS/MS 1 1 121720000 61708000 60010000 6741 494 7697 17071;17072 16480;16481 16481 910 2 TSTDRHSLSLDDIR QTICRKPKTSTDRHSL SLSLDDIRLYQKDFLR K T S I R L 0 2 0 3 0 0 0 0 1 1 2 0 0 0 0 3 2 0 0 0 0 0 14 1 1614.7962 G3V4T7;Q96NE9 G3V4T7 459 472 FRMD6 FERM domain-containing protein 6 yes no 3 0.027418 48.467 By MS/MS By matching 1 1 14700000 8876000 5824100 6742 1083 7698 17073;17074 16482 16482 2039 1 TSTFCGTPEFLAPEVLTETSYTR EGMGYGDRTSTFCGTP LTETSYTRAVDWWGLG R T S T R A 1 1 0 0 1 0 3 1 0 0 2 0 0 2 2 2 6 0 1 1 0 0 23 0 2606.221 Q16513;H0Y429 Q16513 814 836 PKN2 Serine/threonine-protein kinase N2 yes no 2;3 3.872E-05 105.04 By MS/MS By MS/MS 2 2 125950000 78041000 47908000 6743 2163 7699 17075;17076;17077;17078 16483;16484;16485;16486;16487 16485 4306;7609;7610;7611 5 TSTPTTDLPIK SSRTPQAKTSTPTTDL PTTDLPIKVDGANINI K T S I K V 0 0 0 1 0 0 0 0 0 1 1 1 0 0 2 1 4 0 0 0 0 0 11 0 1172.6289 C9JR56;Q9UPW6 C9JR56 406 416 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 yes no 2 0.0051767 92.943 By MS/MS By matching 1 1 6131300 3502700 2628600 6744 687 7700 17079;17080 16488 16488 7037 1 TSVSQNVIPSSAQK PSVLLDAKTSVSQNVI VIPSSAQKRETYTFEN K T S Q K R 1 0 1 0 0 2 0 0 0 1 0 1 0 0 1 4 1 0 0 2 0 0 14 0 1444.7522 H0Y8J2;Q03188 H0Y8J2 74 87 CENPC Centromere protein C yes no 2 1.7703E-20 155.26 By MS/MS By MS/MS 1 1 11169000 5171200 5997400 6745 1148 7701 17081;17082 16489;16490 16489 2184 2 TTEEQVQASTPCPR EGHSGIKKTTEEQVQA QASTPCPRTEMASARI K T T P R T 1 1 0 0 1 2 2 0 0 0 0 0 0 0 2 1 3 0 0 1 0 0 14 0 1602.7308 Q14137 Q14137 97 110 BOP1 Ribosome biogenesis protein BOP1 yes yes 2 0.0010072 94.532 By MS/MS By MS/MS 1 1 10695000 5436600 5258000 6746 2084 7702 17083;17084 16491;16492 16492 4113;7571 2 TTEINRLPSANQGSPFK HFVLSALKTTEINRLP ANQGSPFKSALSTVSF K T T F K S 1 1 2 0 0 1 1 1 0 1 1 1 0 1 2 2 2 0 0 0 0 0 17 1 1858.9537 E5RFP7;E5RIE3;E5RFE4;Q56NI9 E5RFP7 62 78 ESCO2 N-acetyltransferase ESCO2 yes no 3 0.02693 48.315 By matching By MS/MS 1 1 12758000 6607100 6151100 6747 775 7703 17085;17086 16493 16493 1390 1 TTGFGMIYDSLDYAK RTHFGGGKTTGFGMIY YDSLDYAKKNEPKHRL K T T A K K 1 0 0 2 0 0 0 2 0 1 1 1 1 1 0 1 2 0 2 0 0 0 15 0 1680.7705 E7ETK0;A0A087WUS0;P62847 E7ETK0 69 83 RPS24 40S ribosomal protein S24 yes no 2 0.0085141 80.69 By MS/MS By MS/MS 1 1 7681500 3986800 3694600 6748 58 7704 17087;17088 16494;16495 16495 21 2 TTGIVMDSGDGVTHTVPIYEGYALPHAILR LSLYASGRTTGIVMDS ALPHAILRLDLAGRDL R T T L R L 2 1 0 2 0 0 1 4 2 3 2 0 1 0 2 1 4 0 2 3 0 0 30 0 3182.607 P63261;P60709;I3L3I0;I3L1U9;I3L4N8 P63261 148 177 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 3;4 2.6251E-08 102.46 By MS/MS By MS/MS 3 3 74131000 37062000 37069000 6749 1928 7705;7706 17089;17090;17091;17092;17093;17094 16496;16497;16498;16499;16500;16501 16497 755 6 TTHFVEGGDAGNREDQINR PRGGMKKKTTHFVEGG NREDQINRLIRRMN__ K T T N R L 1 2 2 2 0 1 2 3 1 1 0 0 0 1 0 0 2 0 0 1 0 0 19 1 2114.973 A8MUD9;P18124 A8MUD9 184 202 RPL7 60S ribosomal protein L7 yes no 4 0.0054571 56.25 By MS/MS 1 6875600 0 6875600 6750 497 7707 17095 16502 16502 1 TTHLAGALSPGEAWPFESV EVELNSPRTTHLAGAL EAWPFESV________ R T T S V - 3 0 0 0 0 0 2 2 1 0 2 0 0 1 2 2 2 1 0 1 0 0 19 0 1968.9581 Q9Y3X0 Q9Y3X0 513 531 CCDC9 Coiled-coil domain-containing protein 9 yes yes 2 0.00040258 108.34 By MS/MS By MS/MS 1 1 30850000 19792000 11058000 6751 3113 7708 17096;17097 16503;16504 16504 6675 2 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR AQRSTVFKTTIPEEEE FHQQGTPRASNRSCAI K T T P R A 2 1 0 0 0 2 11 2 1 1 1 0 0 1 2 0 3 0 0 3 0 0 30 0 3410.5638 P20700 P20700 548 577 LMNB1 Lamin-B1 yes yes 3 3.8979E-10 112.42 By MS/MS By MS/MS 1 1 529360000 253310000 276050000 6752 1739 7709 17098;17099 16505;16506 16506 7409 2 TTITTTTTSSSGLGSPMIVGSPR ________________ PMIVGSPRALTQPLGL R T T P R A 0 1 0 0 0 0 0 3 0 2 1 0 1 0 2 5 7 0 0 1 0 0 23 0 2251.1366 C9JJV6;C9JZL8;C9J5M0;C9JC07;Q96S97 C9JJV6 8 30 MYADM Myeloid-associated differentiation marker yes no 2 0.005685 54.859 By MS/MS 1 7972800 0 7972800 6753 640 7710 17100 16507 16507 252 1195 1 TTKSPSDSGYSYETIGK YYYEKIERTTKSPSDS YSYETIGKTTKTPEDG R T T G K T 0 0 0 1 0 0 1 2 0 1 0 2 0 0 1 4 3 0 2 0 0 0 17 1 1819.8476 P46821 P46821 1912 1928 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 2.8236E-16 153.04 By MS/MS By MS/MS 3 3 65896000 31396000 34499000 6754 1840 7711;7712 17101;17102;17103;17104;17105;17106 16508;16509;16510;16511;16512;16513 16513 3508;3509;3510 6 TTKTPEDGDYSYEIIEK YSYETIGKTTKTPEDG YSYEIIEKTTRTPEEG K T T E K T 0 0 0 2 0 0 3 1 0 2 0 2 0 0 1 1 3 0 2 0 0 0 17 1 1987.9262 P46821 P46821 1929 1945 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 1.5956E-05 122.96 By MS/MS By MS/MS 3 3 51712000 25377000 26335000 6755 1840 7713;7714 17107;17108;17109;17110;17111;17112 16514;16515;16516;16517;16518;16519 16518 3518;8277;8278 6 TTNESLLTSFPK VLSPDMPRTTNESLLT SLLTSFPKSVEHVSPD R T T P K S 0 0 1 0 0 0 1 0 0 0 2 1 0 1 1 2 3 0 0 0 0 0 12 0 1336.6874 Q8TDY2 Q8TDY2 249 260 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 2 0.011247 103.97 By MS/MS 1 0 0 0 6756 2541 7715 17113 16520 16520 5190 1 TTNFAGILSQGLR RLLWHGSRTTNFAGIL GILSQGLRIAPPEAPV R T T L R I 1 1 1 0 0 1 0 2 0 1 2 0 0 1 0 1 2 0 0 0 0 0 13 0 1376.7412 P09874 P09874 866 878 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.003953 88.338 By MS/MS By MS/MS 1 1 7083300 4155200 2928200 6757 1665 7716 17114;17115 16521;16522 16522 2 TTNPFYNTM KKANDKKRTTNPFYNT TNPFYNTM________ R T T T M - 0 0 2 0 0 0 0 0 0 0 0 0 1 1 1 0 3 0 1 0 0 0 9 0 1087.4644 F5H527;Q76I76 F5H527 1442 1450 SSH2 Protein phosphatase Slingshot homolog 2 yes no 2 0.017638 68.355 By MS/MS 1 4549900 0 4549900 6758 973 7717 17116 16523 16523 356 0 TTNSSLEEIMDK SKDQGLQKTTNSSLEE SLEEIMDKAYDKFDVE K T T D K A 0 0 1 1 0 0 2 0 0 1 1 1 1 0 0 2 2 0 0 0 0 0 12 0 1366.6286 Q709C8 Q709C8 733 744 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 2 1.5113E-05 124.81 By MS/MS By MS/MS 2 2 30176000 16883000 13293000 6759 2357 7718;7719 17117;17118;17119;17120 16524;16525;16526;16527 16525 949 4779 4 TTNVLGAVNKPLSSAGK FFTPGKPKTTNVLGAV KPLSSAGKQSQTKSSR K T T G K Q 2 0 2 0 0 0 0 2 0 0 2 2 0 0 1 2 2 0 0 2 0 0 17 1 1655.9206 Q9NTI5;A9IYQ1 Q9NTI5 1127 1143 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 0.0015831 93.812 By MS/MS 1 5895500 0 5895500 6760 2918 7720 17121 16528 16528 6167 1 TTPPLKTDSAKPSQSFPPTGEK VQSQAEEKTTPPLKTD SFPPTGEKVSPFDSKA K T T E K V 1 0 0 1 0 1 1 1 0 0 1 3 0 1 5 3 4 0 0 0 0 0 22 2 2313.1852 Q9Y6V0 Q9Y6V0 737 758 PCLO Protein piccolo yes yes 3 0.027175 49.326 By MS/MS 1 0 0 0 6761 3154 7721 17122 16529 16529 6747 1 TTPPQLDTDRSYFLYSK TESEDKYRTTPPQLDT RSYFLYSKLRVDRNSW R T T S K L 0 1 0 2 0 1 0 0 0 0 2 1 0 1 2 2 3 0 2 0 0 0 17 1 2030.9949 CON__ENSEMBL:ENSBTAP00000024462 CON__ENSEMBL:ENSBTAP00000024462 154 170 yes yes 2 0.023435 68.536 By MS/MS By matching 1 1 8491100 5372200 3119000 + 6762 710 7722 17123;17124 16530 16530 1317 1 TTPSATSLPQTVVMTSPVTLTSQTTK DMQTYQIRTTPSATSL TLTSQTTKTDDPQLKR R T T T K T 1 0 0 0 0 2 0 0 0 0 2 1 1 0 3 4 9 0 0 3 0 0 26 0 2676.3892 P18846 P18846 183 208 ATF1 Cyclic AMP-dependent transcription factor ATF-1 yes yes 3 0.01292 43.696 By MS/MS 1 6796000 6796000 0 6763 1729 7723 17125 16531 16531 647 7405 1 TTPSYVAFTDTER IANDQGNRTTPSYVAF VAFTDTERLIGDAAKN R T T E R L 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 1 4 0 1 1 0 0 13 0 1486.694 A0A0G2JIW1;P0DMV9;P0DMV8;P11142;E9PKE3;E9PNE6;P54652;E9PLF4;E9PI65;E9PQQ4;E9PQK7;E9PPY6;E9PN25;P17066;P48741;E9PK54 P11142 37 49 HSPA1B;HSPA1A;HSPA8;HSPA2;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 2 0.0086509 83.081 By MS/MS By MS/MS 1 1 122670000 53922000 68748000 6764 1680;351;1711;894 7724 17126;17127 16532;16533 16532 2 TTQSMQDFPVVDSEEEAEEEFQK VGAYGSERTTQSMQDF EAEEEFQKELSQWRKD R T T Q K E 1 0 0 2 0 3 6 0 0 0 0 1 1 2 1 2 2 0 0 2 0 0 23 0 2702.1541 Q9UBB9 Q9UBB9 198 220 TFIP11 Tuftelin-interacting protein 11 yes yes 2;3 4.4942E-26 159.46 By MS/MS By MS/MS 4 4 651520000 289320000 362190000 6765 2988 7725;7726 17128;17129;17130;17131;17132;17133;17134;17135 16534;16535;16536;16537;16538;16539;16540;16541;16542 16535 1184 6288 9 TTSAGTGGMWR CGTRSAGRTTSAGTGG AGTGGMWRFYTEDSPG R T T W R F 1 1 0 0 0 0 0 3 0 0 0 0 1 0 0 1 3 1 0 0 0 0 11 0 1123.508 P60468 P60468 47 57 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.015127 55.258 By MS/MS By matching 1 1 39840000 20310000 19530000 6766 1927 7727 17136;17137 16543;16544 16544 750 3721 2 TTSFAESCKPVQQPSAFGSMK ________________ PSAFGSMKVSRDKDGS R T T M K V 2 0 0 0 1 2 1 1 0 0 0 2 1 2 2 4 2 0 0 1 0 0 21 1 2287.0613 P49841 P49841 7 27 GSK3B Glycogen synthase kinase-3 beta yes yes 3 9.8501E-05 111.24 By MS/MS By MS/MS 2 2 220910000 115140000 105760000 6767 1862 7728;7729 17138;17139;17140;17141 16545;16546;16547;16548 16548 724 3617 4 TTSFFLNSPEK EWLKSKDRTTSFFLNS FFLNSPEKEHQEMDEG R T T E K E 0 0 1 0 0 0 1 0 0 0 1 1 0 2 1 2 2 0 0 0 0 0 11 0 1269.6241 Q8WYP5 Q8WYP5 1276 1286 AHCTF1 Protein ELYS yes yes 2 0.0057064 79.639 By MS/MS By matching 1 1 8335600 3586400 4749200 6768 2575 7730 17142;17143 16549 16549 5284 1 TTSGDDACNLTSFR VGRRSLERTTSGDDAC ACNLTSFRPATLTVTN R T T F R P 1 1 1 2 1 0 0 1 0 0 1 0 0 1 0 2 3 0 0 0 0 0 14 0 1543.6573 Q96N67;A0A1B0GUE9;A0A0U1RQT6 Q96N67 450 463 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.00080392 96.247 By MS/MS By MS/MS 1 1 41108000 20446000 20662000 6769 2689 7731 17144;17145 16550;16551 16551 5560 2 TTSGDDACNLTSFRPATLTVTNFFK VGRRSLERTTSGDDAC LTVTNFFKQEGDRLSD R T T F K Q 2 1 2 2 1 0 0 1 0 0 2 1 0 3 1 2 6 0 0 1 0 0 25 1 2763.3174 Q96N67;A0A1B0GUE9;A0A0U1RQT6 Q96N67 450 474 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 0.0074743 50.873 By matching By MS/MS 1 1 83879000 41235000 42644000 6770 2689 7732 17146;17147 16552 16552 5560 1 TTSISPALAR IPPKVPQRTTSISPAL SISPALARKNSPGNGS R T T A R K 2 1 0 0 0 0 0 0 0 1 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1015.5662 Q9UKE5 Q9UKE5 676 685 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.0046765 84.188 By MS/MS By MS/MS 2 2 227580000 109090000 118490000 6771 3023 7733;7734 17148;17149;17150;17151 16553;16554;16555 16555 6373;6374 3 TTSPLEEEER QQQEKEMKTTSPLEEE SPLEEEEREIKSSQGL K T T E R E 0 1 0 0 0 0 4 0 0 0 1 0 0 0 1 1 2 0 0 0 0 0 10 0 1189.5463 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 305 314 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.030556 59.153 By matching By MS/MS 1 1 48694000 26261000 22433000 6772 810 7735 17152;17153 16556 16556 1 TTSPPEVSGYSYEK YSYDISEKTTSPPEVS VSGYSYEKTERSRRLL K T T E K T 0 0 0 0 0 0 2 1 0 0 0 1 0 0 2 3 2 0 2 1 0 0 14 0 1543.7042 P46821 P46821 1963 1976 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0012059 103.21 By MS/MS 1 25270000 25270000 0 6773 1840 7736 17154 16557 16557 3520 1 TTSPSSDTDLLDR LVDKSGKRTTSPSSDT SDTDLLDRSASKTELK R T T D R S 0 1 0 3 0 0 0 0 0 0 2 0 0 0 1 3 3 0 0 0 0 0 13 0 1406.6525 C9J9G2;Q96QT6;K7ENU0;K7ERZ4;K7EJ43 C9J9G2 129 141 PHF12 PHD finger protein 12 yes no 2 0.025391 55.291 By MS/MS By matching 1 1 14186000 8094000 6091700 6774 646 7737 17155;17156 16558 16558 1204;1205 0 TTSQAHSLPLSPASTR QAASSPVKTTSQAHSL PLSPASTRQQIDELRD K T T T R Q 2 1 0 0 0 1 0 0 1 0 2 0 0 0 2 4 3 0 0 0 0 0 16 0 1652.8482 P19838 P19838 897 912 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 2 0.030899 58.864 By MS/MS By matching 1 1 8242800 4377700 3865100 6775 1734 7738 17157;17158 16559 16559 1 TTSREEVDEAASTLTR VSKERVARTTSREEVD EAASTLTRLPL_____ R T T T R L 2 2 0 1 0 0 3 0 0 0 1 0 0 0 0 2 4 0 0 1 0 0 16 1 1764.849 D6RAU6;D6REP2;D6RAJ6;Q9UKT5 D6RAU6 46 61 FBXO4 F-box only protein 4 yes no 3 0.00012673 103.58 By MS/MS By MS/MS 1 1 7715100 4936500 2778600 6776 742 7739 17159;17160 16560;16561 16560 1343 2 TTTAAAVASTGPSSRSPSTLLPK KSTQTVAKTTTAAAVA SPSTLLPKKPTAIKTE K T T P K K 4 1 0 0 0 0 0 1 0 0 2 1 0 0 3 5 5 0 0 1 0 0 23 1 2200.1699 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4;B5MEG9 E7EVA0 1955 1977 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0010488 68.189 By MS/MS By MS/MS 1 1 61909000 34308000 27601000 6777 828 7740 17161;17162 16562;16563;16564;16565 16565 1540;1541;7098 4 TTTAAGSSHSRPGVPVEGSPGRNPGV QTRLLGEKTTTAAGSS SPGRNPGV________ K T T G V - 2 2 1 0 0 0 1 5 1 0 0 0 0 0 4 4 3 0 0 3 0 0 26 2 2474.2262 Q8NE01 Q8NE01 682 707 CNNM3 Metal transporter CNNM3 yes yes 3 0.0012562 69.581 By MS/MS By MS/MS 1 1 19435000 11107000 8327400 6778 2512 7741 17163;17164 16566;16567 16567 5132 2 TTTSPFFSEDTFR HTKENTIRTTTSPFFS FFSEDTFRQSPFTSNS R T T F R Q 0 1 0 1 0 0 1 0 0 0 0 0 0 3 1 2 4 0 0 0 0 0 13 0 1534.694 G5E9Z1;Q17R98 G5E9Z1 407 419 ZNF827 Zinc finger protein 827 yes no 2 0.00083894 98.942 By MS/MS By MS/MS 1 1 9516200 5489700 4026500 6779 1104 7742 17165;17166 16568;16569 16568 2086;7188 2 TTVHNIPGFDSIKETNMQDGSVQVIK HLSSLLNKTTVHNIPG DGSVQVIKDHVTNCAF K T T I K D 0 0 2 2 0 2 1 2 1 3 0 2 1 1 1 2 3 0 0 3 0 0 26 1 2857.428 Q9NVR5 Q9NVR5 793 818 DNAAF2 Protein kintoun yes yes 3 0.0085977 50.215 By MS/MS 1 3136200 3136200 0 6780 2926 7743 17167 16570 16570 7883;7884 1 TTVVAAAAFLDAFQKVADMATNTRGGTR GKLQSQLRTTVVAAAA TNTRGGTREIGSALTR R T T T R E 7 2 1 2 0 1 0 2 0 0 1 1 1 2 0 0 5 0 0 3 0 0 28 2 2882.4709 H0YBL3;O43312 H0YBL3 41 68 MTSS1 Metastasis suppressor protein 1 yes no 3 0.021669 53.266 By MS/MS 1 0 0 0 6781 1163 7744 17168 16571 16571 421 1 TTWGDGGENSPCNVVSK FESGKAYKTTWGDGGE SPCNVVSKQPGPVTNG K T T S K Q 0 0 2 1 1 0 1 3 0 0 0 1 0 0 1 2 2 1 0 2 0 0 17 0 1806.7843 H3BM38;H3BV99;H3BP15;H3BQY9;O00161 H3BM38 101 117 SNAP23 Synaptosomal-associated protein;Synaptosomal-associated protein 23 yes no 2 1.3732E-15 147.64 By MS/MS By MS/MS 1 1 93379000 45654000 47725000 6782 1224 7745 17169;17170 16572;16573 16572 2286 2 TTYDSAEEENKENLYAGK DTNASPEKTTYDSAEE KENLYAGKNTKIKRIY K T T G K N 2 0 2 1 0 0 4 1 0 0 1 2 0 0 0 1 2 0 2 0 0 0 18 1 2060.9175 Q9HAW4;E7ESG2 Q9HAW4 79 96 CLSPN Claspin yes no 2;3 0.00017071 96.23 By MS/MS By MS/MS 2 2 37170000 15646000 21524000 6783 2861 7746 17171;17172;17173;17174 16574;16575 16574 6028;8466 2 TTYLVLDEADR CGKTNLRRTTYLVLDE LVLDEADRMLDMGFEP R T T D R M 1 1 0 2 0 0 1 0 0 0 2 0 0 0 0 0 2 0 1 1 0 0 11 0 1294.6405 J3KTA4;P17844;J3QSF1;J3KRZ1 J3KTA4 242 252 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2 0.0034402 101.97 By MS/MS By MS/MS 1 1 15028000 9348700 5678900 6784 1341 7747 17175;17176 16576;16577 16577 2 TVAHVCNTR ELEAPSMKTVAHVCNT VAHVCNTRTLGR____ K T V T R T 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 2 0 0 2 0 0 9 0 1056.5135 G8JLN4 G8JLN4 131 139 VSTM1 yes yes 2 0.028167 76.1 By matching By MS/MS 1 1 18891000 9595800 9295400 6785 1110 7748 17177;17178 16578 16578 1 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR QSRAIPTRTVAISDAA STTPGGTRIIYDRKFL R T V T R I 3 1 0 2 1 1 0 4 1 1 2 0 0 1 3 2 7 0 1 1 0 0 31 0 3191.5193 Q13542 Q13542 21 51 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 yes yes 3;4 1.1627E-05 77.63 By MS/MS By MS/MS 3 3 391170000 158290000 232870000 6786 2064 7749;7750 17179;17180;17181;17182;17183;17184 16579;16580;16581;16582;16583;16584 16582 4076;7563;7564;7565 6 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRK QSRAIPTRTVAISDAA TRIIYDRKFLLDRRNS R T V R K F 3 2 0 3 1 1 0 4 1 3 2 1 0 1 3 2 7 0 2 1 0 0 37 2 3979.9738 Q13542 Q13542 21 57 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 yes yes 4 0.0056708 47.719 By MS/MS By matching 1 1 47655000 15537000 32117000 6787 2064 7751 17185;17186 16585 16585 4076;7563;7564;7565 1 TVANLLSGKSPR MPHPATGKTVANLLSG LLSGKSPRKSAEPSAN K T V P R K 1 1 1 0 0 0 0 1 0 0 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1241.7092 J3KQ96;E7ETY2;Q13428 J3KQ96 147 158 TCOF1 Treacle protein no no 2;3 1.0891E-18 164.7 By MS/MS By MS/MS 2 3 1290100000 693980000 596080000 6788 822;2059 7752 17187;17188;17189;17190;17191 16586;16587;16588;16589 16587 1511;1512 4 TVARTPLGQR SESSVDQKTVARTPLG ARTPLGQRSRSGSSQE K T V Q R S 1 2 0 0 0 1 0 1 0 0 1 0 0 0 1 0 2 0 0 1 0 0 10 1 1097.6305 Q9UQ35 Q9UQ35 1527 1536 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.025466 52.79 By matching By MS/MS 1 1 61465000 34768000 26697000 6789 3074 7753 17192;17193 16590 16590 1 TVDLDPGTLYVHSV PSRKSRAKTVDLDPGT GTLYVHSV________ K T V S V - 0 0 0 2 0 0 0 1 1 0 2 0 0 0 1 1 2 0 1 3 0 0 14 0 1514.7617 Q8WY07 Q8WY07 606 619 SLC7A3 Cationic amino acid transporter 3 yes yes 2 2.4664E-26 170.47 By MS/MS By MS/MS 1 1 38921000 17129000 21793000 6790 2573 7754 17194;17195 16591;16592 16591 5271;8408 2 TVDLGISDLEDDC TTGKRTIKTVDLGISD ISDLEDDC________ K T V D C - 0 0 0 4 1 0 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 13 0 1450.6134 F5H5U2;Q8NHQ9 F5H5U2 557 569 DDX55 ATP-dependent RNA helicase DDX55 yes no 2 4.1111E-103 236.08 By MS/MS By MS/MS 1 1 38300000 20032000 18268000 6791 979 7755 17196;17197 16593;16594 16593 1834 2 TVDNFVALATGEK LFGKTVPKTVDNFVAL VALATGEKGFGYKNSK K T V E K G 2 0 1 1 0 0 1 1 0 0 1 1 0 1 0 0 2 0 0 2 0 0 13 0 1363.6983 P23284 P23284 72 84 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 0.00061364 117.23 By MS/MS By MS/MS 1 1 14079000 7324500 6754000 6792 1754 7756 17198;17199 16595;16596 16595 2 TVDSQGPTPVCTPTFLER GTLDTPEKTVDSQGPT CTPTFLERRKSQVAEL K T V E R R 0 1 0 1 1 1 1 1 0 0 1 0 0 1 3 1 4 0 0 2 0 0 18 0 2003.9622 H7BZL0;C9J808;Q9BYG3 H7BZL0 36 53 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 2;3 4.7388E-10 142.1 By MS/MS By MS/MS 2 2 50660000 28861000 21799000 6793 643 7757 17200;17201;17202;17203 16597;16598;16599 16599 7020;7021 3 TVEDEDQDSEEEKDNDSYIK VNDKNLKKTVEDEDQD KDNDSYIKERSDIPSG K T V I K E 0 0 1 5 0 1 5 0 0 1 0 2 0 0 0 2 1 0 1 1 0 0 20 1 2386.9772 Q9Y5T5 Q9Y5T5 407 426 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 2;3 0.0034488 76.311 By MS/MS By MS/MS 2 2 105190000 57113000 48079000 6794 3135 7758 17204;17205;17206;17207 16600;16601;16602;16603 16603 6714;6715 4 TVEVAEGEAVRTPQSVTAK EKPKPNGRTVEVAEGE TPQSVTAKQPPEIDKK R T V A K Q 3 1 0 0 0 1 3 1 0 0 0 1 0 0 1 1 3 0 0 4 0 0 19 1 1971.0273 Q86UE4;E5RJU9;H0YB56 Q86UE4 132 150 MTDH Protein LYRIC no no 3 0.032025 47.603 By matching By MS/MS 1 1 21695000 12660000 9035200 6795 2401;1161 7759 17208;17209 16604 16604 0 TVFPGAVPVLPASPPPK IPPSKRKKTVFPGAVP LPASPPPKDSLRSTPS K T V P K D 2 0 0 0 0 0 0 1 0 0 1 1 0 1 6 1 1 0 0 3 0 0 17 0 1672.9552 M0R165;Q9UBC2;M0R2S2 M0R165 217 233 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 2 0.0055541 87.388 By MS/MS By MS/MS 1 1 17903000 8216500 9686800 6796 1422 7760 17210;17211 16605;16606;16607 16606 2615 2 TVFPGAVPVLPASPPPKDSLR IPPSKRKKTVFPGAVP PPPKDSLRSTPSHGSV K T V L R S 2 1 0 1 0 0 0 1 0 0 2 1 0 1 6 2 1 0 0 3 0 0 21 1 2144.1994 M0R165;Q9UBC2;M0R2S2 M0R165 217 237 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 2;3 6.0318E-05 114.03 By MS/MS By MS/MS 2 2 90994000 54397000 36597000 6797 1422 7761 17212;17213;17214;17215 16608;16609;16610;16611;16612;16613;16614 16609 2615 7 TVFSPTLPAAR NDQGARRKTVFSPTLP SPTLPAARSSLGSLQT K T V A R S 2 1 0 0 0 0 0 0 0 0 1 0 0 1 2 1 2 0 0 1 0 0 11 0 1158.6397 C9J6P4;Q7Z2W4 C9J6P4 375 385 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0042769 83.226 By MS/MS By MS/MS 1 1 124390000 67692000 56699000 6798 642 7762 17216;17217 16615;16616 16615 1198 2 TVGTPIASVPGSTNTGTVPGSEK SSVIQNLRTVGTPIAS GTVPGSEKDSDSMETE R T V E K D 1 0 1 0 0 0 1 4 0 1 0 1 0 0 3 3 5 0 0 3 0 0 23 0 2156.0961 A0A087WW66;Q99460;H7BZR6 A0A087WW66 270 292 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 2;3 4.091E-25 155.08 By MS/MS By MS/MS 2 2 86717000 44698000 42019000 6799 85 7763 17218;17219;17220;17221 16617;16618;16619 16619 6851 3 TVGTPIASVPGSTNTGTVPGSEKDSDSMETEEK SSVIQNLRTVGTPIAS DSMETEEKTSSAFVGK R T V E K T 1 0 1 2 0 0 4 4 0 1 0 2 1 0 3 5 6 0 0 3 0 0 33 1 3307.5249 A0A087WW66;Q99460;H7BZR6 A0A087WW66 270 302 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 3 2.3931E-07 78.228 By MS/MS By MS/MS 3 3 157450000 78255000 79195000 6800 85 7764;7765 17222;17223;17224;17225;17226;17227 16620;16621;16622;16623 16620 31 152;6851 4 TVHRSPLLLGAQR VPTASDSRTVHRSPLL PLLLGAQRRAVANGGT R T V Q R R 1 2 0 0 0 1 0 1 1 0 3 0 0 0 1 1 1 0 0 1 0 0 13 1 1446.8419 Q96DR7 Q96DR7 76 88 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 3 0.0092507 73.802 By MS/MS 1 0 0 0 6801 2637 7766 17228 16624 16624 5434 1 TVIIEQSWGSPK VTMGPKGRTVIIEQSW EQSWGSPKVTKDGVTV R T V P K V 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 2 1 1 0 1 0 0 12 0 1343.7085 P10809;E7EXB4;E7ESH4;C9JL25;C9JL19;C9JCQ4 P10809 61 72 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2 4.9377E-45 192.54 By MS/MS By MS/MS 2 2 89931000 47478000 42453000 6802 1677 7767;7768 17229;17230;17231;17232 16625;16626;16627;16628;16629 16628 3163 4 TVIRLPSGSGAASPTGSAVDIR DVETQSGKTVIRLPSG TGSAVDIRAGAISASG K T V I R A 3 2 0 1 0 0 0 3 0 2 1 0 0 0 2 4 2 0 0 2 0 0 22 1 2111.1335 Q09666 Q09666 204 225 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 3 0.0063815 56.055 By MS/MS By MS/MS 1 1 19655000 13284000 6370700 6803 2020 7769 17233;17234 16630;16631 16630 3916;3917;3918 1 TVKQEQINTEPLEDTVLSPTK ETFEPEDKTVKQEQIN DTVLSPTKKRKRQKGT K T V T K K 0 0 1 1 0 2 3 0 0 1 2 2 0 0 2 1 4 0 0 2 0 0 21 1 2369.2326 O15446 O15446 268 288 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 3 1.1219E-17 145.61 By MS/MS By MS/MS 1 1 20532000 11711000 8820900 6804 1483 7770 17235;17236 16632;16633 16632 2773;7309;7310 2 TVLGPDTAEPATAEAAVAPPDAGLPLPGLPAEGSPPPK SCVPVHQKTVLGPDTA AEGSPPPKTYVSCLKS K T V P K T 8 0 0 2 0 0 3 4 0 0 4 1 0 0 10 1 3 0 0 2 0 0 38 0 3570.8457 Q92667 Q92667 396 433 AKAP1 A-kinase anchor protein 1, mitochondrial yes yes 3 7.3984E-17 95.404 By MS/MS By MS/MS 1 1 56988000 38594000 18394000 6805 2594 7771 17237;17238 16634;16635 16634 5331 1 TVLIMELINNVAK FGGAGVGKTVLIMELI ELINNVAKAHGGYSVF K T V A K A 1 0 2 0 0 0 1 0 0 2 2 1 1 0 0 0 1 0 0 2 0 0 13 0 1456.8323 H0YH81;P06576;F8W079;F8W0P7;H0YI37 H0YH81 150 162 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 2 0.0093752 83.397 By MS/MS 1 2695700 2695700 0 6806 1184 7772 17239 16636 16636 430 1 TVLPTVPESPEEEVK GLFLPPSKTVLPTVPE ESPEEEVKASQLSVQQ K T V V K A 0 0 0 0 0 0 4 0 0 0 1 1 0 0 3 1 2 0 0 3 0 0 15 0 1652.8509 O75152;E9PBY7;E9PQ61 O75152 100 114 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 8.1071E-21 153.94 By MS/MS By MS/MS 1 1 103690000 58372000 45319000 6807 1538 7773 17240;17241 16637;16638 16638 2907 2 TVLSLFDEEEDKMEDQNIIQAPQK KGTKPRTKTVLSLFDE NIIQAPQKEVGKGRDP K T V Q K E 1 0 1 3 0 3 4 0 0 2 2 2 1 1 1 1 1 0 0 1 0 0 24 1 2819.3535 F8W7U3;E7ESD2;Q641Q2;A0A087WYF6;B1AP61;A0A096LPC5;J3KP36;A0A0A0MR88;Q9Y4E1 F8W7U3 711 734 FAM21A;FAM21C WASH complex subunit FAM21A;WASH complex subunit FAM21C no no 3 4.155E-06 94.072 By MS/MS By MS/MS 1 1 155500000 73308000 82188000 6808 814;183 7774 17242;17243 16639;16640 16639 79 322 2 TVMDGGLESDGPNMTENGLEDESRPQR RRRTDEDRTVMDGGLE EDESRPQRRNRSRRRR R T V Q R R 0 2 2 3 0 1 4 4 0 0 2 0 2 0 2 2 2 0 0 1 0 0 27 1 2933.2767 P51116 P51116 558 584 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 0.00012053 77.045 By MS/MS By MS/MS 2 2 64615000 38897000 25718000 6809 1873 7775;7776 17244;17245;17246;17247 16641;16642;16643 16641 731;732 3633 3 TVNDVNSNNNMSYRNAGTVR NPPVSPGKTVNDVNSN YRNAGTVRQMLESKRN K T V V R Q 1 2 6 1 0 0 0 1 0 0 0 0 1 0 0 2 2 0 1 3 0 0 20 1 2225.0243 Q6VMQ6 Q6VMQ6 677 696 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 2 0.030993 42.388 By MS/MS 1 0 0 0 6810 2341 7777 17248 16644 16644 940 1 TVNSSSTSTMCELTHLKKYR LTAQSSFKTVNSSSTS LTHLKKYRRYEVIMTA K T V Y R R 0 1 1 0 1 0 1 0 1 0 2 2 1 0 0 4 4 0 1 1 0 0 20 2 2342.1359 A0A087WTQ6;Q7Z5N4 A0A087WTQ6 1652 1671 SDK1 Protein sidekick-1 yes no 3 0.026331 41.348 By matching By MS/MS 1 1 17806000 7184400 10622000 6811 40 7778 17249;17250 16645 16645 18 75;76;77;78 1 TVPSTPTLVVPHR HFFDDEDRTVPSTPTL PTLVVPHRTDGFAEAI R T V H R T 0 1 0 0 0 0 0 0 1 0 1 0 0 0 3 1 3 0 0 3 0 0 13 0 1402.7932 P12270 P12270 2133 2145 TPR Nucleoprotein TPR yes yes 2;3 0.0035099 105.95 By MS/MS By MS/MS 2 2 95534000 56842000 38692000 6812 1686 7779 17251;17252;17253;17254 16646;16647;16648;16649;16650;16651;16652;16653;16654 16653 7394;7395 9 TVQGPPTSDDIFER ATSVATKKTVQGPPTS TSDDIFEREYKYGAHN K T V E R E 0 1 0 2 0 1 1 1 0 1 0 0 0 1 2 1 2 0 0 1 0 0 14 0 1560.742 P04181 P04181 33 46 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes yes 2 0.0030741 105.2 By MS/MS 1 5811700 5811700 0 6813 1634 7780 17255 16655 16655 1 TVQPVAMGPDGLPVDASSVSNNYIQTLGR VVKTVTTRTVQPVAMG NYIQTLGRDFRKNGNG R T V G R D 2 1 2 2 0 2 0 3 0 1 2 0 1 0 3 3 2 0 1 4 0 0 29 0 2985.4866 C9JZR2;O60716;E9PRE2;E9PKL1 C9JZR2 152 180 CTNND1 Catenin delta-1 yes no 3 2.2014E-11 121.62 By MS/MS By MS/MS 2 2 110990000 52166000 58821000 6814 706 7781;7782 17256;17257;17258;17259 16656;16657;16658;16659;16660;16661 16661 273 1309;8110 6 TVQSPNSSVPSPGLAGPVTMTSVHPPIR QPRPPSNRTVQSPNSS TSVHPPIRSPSASSVG R T V I R S 1 1 1 0 0 1 0 2 1 1 1 0 1 0 6 5 3 0 0 4 0 0 28 0 2812.4542 O15164 O15164 657 684 TRIM24 Transcription intermediary factor 1-alpha yes yes 3 1.0132E-09 103.75 By MS/MS By MS/MS 1 1 31352000 18485000 12867000 6815 1474 7783 17260;17261 16662;16663 16662 531 2753;2754;2755;7302 2 TVQSPNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSR QPRPPSNRTVQSPNSS SASSVGSRGSSGSSSK R T V S R G 2 2 1 0 0 1 0 3 1 1 1 0 1 0 7 10 3 0 0 5 0 0 38 1 3727.8952 O15164 O15164 657 694 TRIM24 Transcription intermediary factor 1-alpha yes yes 4 0.0039108 47.605 By MS/MS By matching 1 1 17943000 10990000 6953300 6816 1474 7784 17262;17263 16664 16664 531 2753;2754;2755;2756;7302 1 TVQYRTQGAVEAAKVGALASLIR QPYINYSRTVQYRTQG GALASLIRSVASFSIY R T V I R S 5 2 0 0 0 2 1 2 0 1 2 1 0 0 0 1 2 0 1 3 0 0 23 2 2401.3441 Q9Y646 Q9Y646 183 205 CPQ Carboxypeptidase Q yes yes 3 0.020762 41.615 By MS/MS 1 6091400 0 6091400 6817 3142 7785 17264 16665 16665 6725;8514 1 TVRRLPTSSR GTATCSCRTVRRLPTS RRLPTSSRSWWTRWGM R T V S R S 0 3 0 0 0 0 0 0 0 0 1 0 0 0 1 2 2 0 0 1 0 0 10 2 1171.6786 K7EJP6 K7EJP6 226 235 PGS1 yes yes 2 0.024216 47.189 By MS/MS 1 171690000 171690000 0 6818 1372 7786 17265 16666 16666 2539;2540 1 TVSASSTGDLPK SPSHDRSRTVSASSTG SSTGDLPKAKTRAADL R T V P K A 1 0 0 1 0 0 0 1 0 0 1 1 0 0 1 3 2 0 0 1 0 0 12 0 1161.5877 H7C5L6;P78362 H7C5L6 99 110 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 2 3.772E-14 155.14 By MS/MS By MS/MS 2 1 51631000 27620000 24011000 6819 1292 7787;7788 17266;17267;17268 16667;16668;16669 16667 2390;2391;2392;7236 2 TVSATCTDVLR SQFASQGKTVSATCTD ATCTDVLRNSFNTSPG K T V L R N 1 1 0 1 1 0 0 0 0 0 1 0 0 0 0 1 3 0 0 2 0 0 11 0 1221.6023 C9JWZ1;A0A0A0MR27;J3QT39;Q49A88 C9JWZ1 92 102 CCDC14 Coiled-coil domain-containing protein 14 yes no 2 0.0055171 63.181 By matching By MS/MS 1 1 3863500 1577200 2286200 6820 198 7789 17269;17270 16670 16670 351;6880;6881 1 TVSDNSLSNSR DYTQPMKRTVSDNSLS DNSLSNSRGEGKPDLK R T V S R G 0 1 2 1 0 0 0 0 0 0 1 0 0 0 0 4 1 0 0 1 0 0 11 0 1178.5527 Q96RU3;B7ZL14;H0Y7W6 Q96RU3 294 304 FNBP1 Formin-binding protein 1 yes no 2 0.00093394 107.37 By MS/MS By MS/MS 2 2 45662000 24023000 21639000 6821 2706 7790;7791 17271;17272;17273;17274 16671;16672;16673 16672 5586;5587 2 TVSEPSLSGLLQIK LQNGGIKRTVSEPSLS LSGLLQIKKLKQDQKA R T V I K K 0 0 0 0 0 1 1 1 0 1 3 1 0 0 1 3 1 0 0 1 0 0 14 0 1470.8294 E7EPB1;E7EQS8;Q6N021;D6RE87 E7EPB1 97 110 TET2 Methylcytosine dioxygenase TET2 yes no 2 3.4058E-33 172.85 By MS/MS By MS/MS 1 1 11280000 6372700 4907400 6822 798 7792 17275;17276 16674;16675;16676 16676 1426 3 TVSETSLSPVNALPAAAQGPEEPGPDAMR SPPPRLRRTVSETSLS EPGPDAMRYSLYQSPH R T V M R Y 5 1 1 1 0 1 3 2 0 0 2 0 1 0 5 3 2 0 0 2 0 0 29 0 2891.3971 Q96JH8;F8WEM1 Q96JH8 214 242 RADIL Ras-associating and dilute domain-containing protein yes no 3 0.0021474 53.659 By matching By MS/MS 1 1 20784000 11402000 9381500 6823 2672 7793 17277;17278 16677 16677 1063 7795 1 TVSFEALPIMR NRYTNTSKTVSFEALP FEALPIMRNEPSSYCS K T V M R N 1 1 0 0 0 0 1 0 0 1 1 0 1 1 1 1 1 0 0 1 0 0 11 0 1262.6693 O15084 O15084 1009 1019 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes yes 2 3.1061E-06 133.05 By MS/MS By MS/MS 1 1 58569000 29209000 29360000 6824 1471 7794 17279;17280 16678;16679 16678 530 2745 2 TVSGPGTPEPRPATPGASSVEQLR ________________ ASSVEQLRKEGNELFK M T V L R K 2 2 0 0 0 1 2 3 0 0 1 0 0 0 5 3 3 0 0 2 0 0 24 1 2390.219 Q9H3U1 Q9H3U1 2 25 UNC45A Protein unc-45 homolog A yes yes 3 0.0029525 61.087 By MS/MS By MS/MS 1 1 17746000 9596600 8149000 6825 2830 7795 17281;17282 16680;16681 16681 7852 2 TVSLGAGAKDELHIVEAEAMNYEGSPIK NEHQLSLRTVSLGAGA NYEGSPIKVTLATLKM R T V I K V 4 0 1 1 0 0 4 3 1 2 2 2 1 0 1 2 1 0 1 2 0 0 28 1 2928.4539 P06748 P06748 46 73 NPM1 Nucleophosmin yes yes 3;4 1.2182E-09 110.06 By MS/MS By MS/MS 3 7 277070000 116010000 161060000 6826 1647 7796;7797;7798 17283;17284;17285;17286;17287;17288;17289;17290;17291;17292 16682;16683;16684;16685;16686;16687;16688;16689;16690;16691;16692 16691 600 3108 11 TVSLPLSSPNIK NSLSTSYKTVSLPLSS PLSSPNIKLNLTSPKR K T V I K L 0 0 1 0 0 0 0 0 0 1 2 1 0 0 2 3 1 0 0 1 0 0 12 0 1254.7184 A0A0A0MQZ8;H0Y7Y3;H0Y785;H0Y472;H0Y4P6;Q8IWZ3 A0A0A0MQZ8 46 57 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes no 2 1.4804E-09 140.45 By MS/MS By MS/MS 1 1 16040000 7129900 8910200 6827 194 7799 17293;17294 16693;16694 16693 346;347 2 TVSPPIR STSVKSPKTVSPPIRK KTVSPPIRKGWSMSEQ K T V I R K 0 1 0 0 0 0 0 0 0 1 0 0 0 0 2 1 1 0 0 1 0 0 7 0 768.44939 Q9UHB6;F8VS07;F8VQE1 Q9UHB6 607 613 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.026342 83.647 By MS/MS 1 17947000 0 17947000 6828 3003 7800 17295 16695 16695 6325 1 TVSSPIPYTPSPSSSR SAQGLRPRTVSSPIPY TPSPSSSRPISPGLSY R T V S R P 0 1 0 0 0 0 0 0 0 1 0 0 0 0 4 6 2 0 1 1 0 0 16 0 1661.8261 Q16204 Q16204 349 364 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 0.00035463 97.767 By MS/MS By MS/MS 1 1 17475000 9242400 8232200 6829 2161 7801 17296;17297 16696;16697 16697 4291;4292;4293;4294;4295;4296 2 TVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTR SAQGLRPRTVSSPIPY TPPTSLTRAGMSYYNS R T V T R A 1 2 0 0 0 0 0 2 1 2 2 0 0 1 8 10 6 0 2 2 0 0 39 1 4029.0484 Q16204 Q16204 349 387 CCDC6 Coiled-coil domain-containing protein 6 yes yes 4 0.0004037 53.416 By MS/MS By MS/MS 2 2 152590000 93922000 58670000 6830 2161 7802;7803 17298;17299;17300;17301 16698;16699;16700 16700 4288;4291;4292;4293;4294;4295;4296 3 TVSSPPTSPR SSELDASKTVSSPPTS SSPPTSPRPGSAATVS K T V P R P 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 0 1 0 0 10 0 1027.5298 O76094 O76094 618 627 SRP72 Signal recognition particle subunit SRP72 yes yes 2 0.022603 62.633 By MS/MS 1 117920000 0 117920000 6831 1564 7804 17302 16701 16701 2953;2954;2955;7347 1 TVSSPPTSPRPGSAATVSASTSNIIPPR SSELDASKTVSSPPTS TSNIIPPRHQKPAGAP K T V P R H 3 2 1 0 0 0 0 1 0 2 0 0 0 0 6 7 4 0 0 2 0 0 28 1 2734.425 O76094 O76094 618 645 SRP72 Signal recognition particle subunit SRP72 yes yes 3 5.1294E-09 114.14 By MS/MS By MS/MS 2 2 146430000 71760000 74668000 6832 1564 7805 17303;17304;17305;17306 16702;16703;16704;16705;16706;16707;16708;16709;16710 16708 2953;2954;2955;7347 9 TVSSSNLFFK LEKSSQVRTVSSSNLF SSSNLFFKGSRFRYSG R T V F K G 0 0 1 0 0 0 0 0 0 0 1 1 0 2 0 3 1 0 0 1 0 0 10 0 1128.5815 A0A087WVP2;H0YKW6;H0Y5N1;B5MC67;Q7Z6J6 A0A087WVP2 70 79 FRMD5 FERM domain-containing protein 5 yes no 2 0.0060747 81.017 By MS/MS By MS/MS 1 1 6081800 2925100 3156700 6833 79 7806 17307;17308 16711;16712 16712 140 2 TVSTSSQPEENVDR RSKLQLERTVSTSSQP QPEENVDRANDMLPKK R T V D R A 0 1 1 1 0 1 2 0 0 0 0 0 0 0 1 3 2 0 0 2 0 0 14 0 1547.7063 P42684 P42684 815 828 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 2.7149E-21 161.82 By MS/MS By MS/MS 2 2 49310000 28062000 21248000 6834 1828 7807;7808 17309;17310;17311;17312 16713;16714;16715;16716;16717;16718 16714 3450;3451 6 TVTAMDVVYALK YTEHAKRKTVTAMDVV MDVVYALKRQGRTLYG K T V L K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 1 3 0 0 12 0 1309.6952 P62805 P62805 81 92 HIST1H4A Histone H4 yes yes 2 0.0026488 95.775 By MS/MS By MS/MS 2 2 31701000 16057000 15644000 6835 1945 7809 17313;17314;17315;17316 16719;16720 16720 763 2 TVTCVTVVEPEAPPSPDVLQAATHR TFFGSEERTVTCVTVV VLQAATHRVVELRPPS R T V H R V 3 1 0 1 1 1 2 0 1 0 1 0 0 0 4 1 4 0 0 5 0 0 25 0 2673.3432 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 959 983 PHRF1 PHD and RING finger domain-containing protein 1 yes no 3 1.0583E-05 81.884 By matching By MS/MS 1 1 87201000 38768000 48434000 6836 371 7810 17317;17318 16721 16721 689 1 TVTNAVVTVPAYFNDSQR IAEAYLGKTVTNAVVT AYFNDSQRQATKDAGT K T V Q R Q 2 1 2 1 0 1 0 0 0 0 0 0 0 1 1 1 3 0 1 4 0 0 18 0 1980.9905 P11142;E9PN89;E9PLF4;E9PI65;E9PQQ4;E9PQK7;E9PK54 P11142 138 155 HSPA8 Heat shock cognate 71 kDa protein no no 2 0.0052493 78.763 By MS/MS By matching 1 1 14558000 6698100 7859600 6837 1680;894 7811 17319;17320 16722 16722 1 TVTPASSAK CEVSVTPKTVTPASSA VTPASSAKTSPAKQQA K T V A K T 2 0 0 0 0 0 0 0 0 0 0 1 0 0 1 2 2 0 0 1 0 0 9 0 860.46035 A0A1C7CYX9;Q16555 A0A1C7CYX9 617 625 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 0.020534 66.19 By MS/MS 1 7465400 7465400 0 6838 435 7812 17321 16723 16723 814;815 1 TVTYEDPQAVGGLASALDNR NSLAEQRKTVTYEDPQ LASALDNRKQSSEGTF K T V N R K 3 1 1 2 0 1 1 2 0 0 2 0 0 0 1 1 2 0 1 2 0 0 20 0 2076.0124 F5H3S6;B7Z2U2;Q6ZVM7 F5H3S6 253 272 TOM1L2 TOM1-like protein 2 yes no 2;3 6.3311E-12 144.29 By MS/MS By MS/MS 1 2 34297000 15130000 19167000 6839 587 7813 17322;17323;17324 16724;16725;16726 16724 6998;6999;8080 3 TVVSGLVQFVPKEELQDR DVGEAEPRTVVSGLVQ PKEELQDRLVVVLCNL R T V D R L 0 1 0 1 0 2 2 1 0 0 2 1 0 1 1 1 1 0 0 4 0 0 18 1 2043.1001 P54577 P54577 401 418 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes yes 3 0.023871 61.265 By MS/MS By MS/MS 1 2 9126500 3801300 5325200 6840 1903 7814 17325;17326;17327 16727;16728 16727 1 TVYQHQKAMKPWIQPK FALPQYLKTVYQHQKA MKPWIQPKTKVIPYVR K T V P K T 1 0 0 0 0 3 0 0 1 1 0 3 1 0 2 0 1 1 1 1 0 0 16 2 1982.056 CON__P02663 CON__P02663 182 197 yes yes 2 0.032051 44.299 By MS/MS 1 0 0 0 + 6841 712 7815 17328 16729 16729 275 1 TWNDPSVQQDIK DAKRLIGRTWNDPSVQ PSVQQDIKFLPFKVVE R T W I K F 0 0 1 2 0 2 0 0 0 1 0 1 0 0 1 1 1 1 0 1 0 0 12 0 1429.6838 P11021 P11021 102 113 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.017208 76.332 By MS/MS By matching 1 1 13309000 6348500 6960000 6842 1679 7816 17329;17330 16730 16730 1 TWSKYTK ELALSYAKTWSKYTKN KTWSKYTKNIVSWVEK K T W T K N 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 2 1 1 0 0 0 7 1 912.47052 F8VWZ8;Q52LW3 F8VWZ8 214 220 ARHGAP29 Rho GTPase-activating protein 29 yes no 2 0.032017 52.636 By matching By MS/MS 1 1 6805600 2818800 3986800 6843 1023 7817 17331;17332 16731 16731 0 TWTFCGTPEYVAPEIILNK KKIGFGKKTWTFCGTP APEIILNKGHDISADY K T W N K G 1 0 1 0 1 0 2 1 0 2 1 1 0 1 2 0 3 1 1 1 0 0 19 0 2238.1031 A0A0A0MSB3;Q13976 A0A0A0MSB3 303 321 PRKG1 cGMP-dependent protein kinase 1 yes no 2 0.012114 78.501 By matching By MS/MS 1 1 23923000 13135000 10788000 6844 244 7818 17333;17334 16732 16732 6901 0 TYAICGAIR GRFNGQFKTYAICGAI YAICGAIRRMGESDDS K T Y I R R 2 1 0 0 1 0 0 1 0 2 0 0 0 0 0 0 1 0 1 0 0 0 9 0 1023.5172 Q8WVC2;P63220;Q9BYK1 Q8WVC2 52 60 RPS21 40S ribosomal protein S21 yes no 2 0.030645 72.485 By matching By MS/MS 1 1 5144600 3072700 2071900 6845 1953 7819 17335;17336 16733 16733 1 TYASGYAHYEEQEN FTNLNLGRTYASGYAH AHYEEQEN________ R T Y E N - 2 0 1 0 0 1 3 1 1 0 0 0 0 0 0 1 1 0 3 0 0 0 14 0 1660.6641 Q9Y3S2 Q9Y3S2 307 320 ZNF330 Zinc finger protein 330 yes yes 2 0.0025013 90.913 By MS/MS By MS/MS 1 1 20895000 10651000 10243000 6846 3111 7820 17337;17338 16734;16735 16734 8510 2 TYGGDTGSPEISFTK VVPSDIPKTYGGDTGS SPEISFTKIFNNVSKE K T Y T K I 0 0 0 1 0 0 1 3 0 1 0 1 0 1 1 2 3 0 1 0 0 0 15 0 1558.7151 H0Y9X0;O94915 H0Y9X0 1135 1149 FRYL Protein furry homolog-like yes no 2 0.0013486 100.68 By MS/MS By MS/MS 1 1 11797000 6538900 5257700 6847 1154 7821 17339;17340 16736;16737;16738 16736 7206 3 TYIDPETYEDPNR HFKFPGTKTYIDPETY ETYEDPNRAVHQFAKE K T Y N R A 0 1 1 2 0 0 2 0 0 1 0 0 0 0 2 0 2 0 2 0 0 0 13 0 1611.7053 Q15375 Q15375 607 619 EPHA7 Ephrin type-A receptor 7 yes yes 2 0.00032709 98.754 By MS/MS By MS/MS 2 2 45442000 24748000 20694000 6848 2135 7822;7823 17341;17342;17343;17344 16739;16740;16741 16740 7597;7598;8346;8347 2 TYSAPAINAIQGGSFESPK QSMDVLHRTYSAPAIN GGSFESPKKEKRSHRR R T Y P K K 3 0 1 0 0 1 1 2 0 2 0 1 0 1 2 3 1 0 1 0 0 0 19 0 1936.9531 Q9H4L5 Q9H4L5 249 267 OSBPL3 Oxysterol-binding protein-related protein 3 yes yes 2 0.0023944 77.39 By matching By MS/MS 1 1 7777900 4351500 3426400 6849 2833 7824 17345;17346 16742 16742 5947 1 TYSDTDSCSDIPLEDPDRPVHCSK RLSQRRRRTYSDTDSC DRPVHCSKNTLNGDLA R T Y S K N 0 1 0 5 2 0 1 0 1 1 1 1 0 0 3 4 2 0 1 1 0 0 24 1 2793.1858 Q9HB20 Q9HB20 242 265 PLEKHA3 Pleckstrin homology domain-containing family A member 3 yes yes 3 2.2452E-06 95.209 By MS/MS By MS/MS 1 1 26053000 14324000 11729000 6850 2862 7825 17347;17348 16743;16744;16745 16744 6029 3 TYSECEDGTYSPEISWHHR EHYGHREKTYSECEDG PEISWHHRKGTKGSED K T Y H R K 0 1 0 1 1 0 3 1 2 1 0 0 0 0 1 3 2 1 2 0 0 0 19 0 2352.9706 P48651 P48651 415 433 PTDSS1 Phosphatidylserine synthase 1 yes yes 3 0.00051745 78.441 By MS/MS By MS/MS 2 1 25355000 18023000 7331900 6851 1848 7826 17349;17350;17351 16746;16747;16748 16747 3550;3551 3 TYSFEQPWPNAR EDVEDRRRTYSFEQPW EQPWPNARPATQSGRH R T Y A R P 1 1 1 0 0 1 1 0 0 0 0 0 0 1 2 1 1 1 1 0 0 0 12 0 1494.6892 Q5VWV2;Q8TEW0 Q5VWV2 1116 1127 PARD3 Partitioning defective 3 homolog yes no 2 0.0014735 91.858 By MS/MS By MS/MS 1 2 7478300 2051400 5426900 6852 2278 7827;7828 17352;17353;17354 16749;16750;16751 16750 4578 3 TYSFTSAMSR KRSSSWGRTYSFTSAM SFTSAMSRGCVTEEEN R T Y S R G 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 3 2 0 1 0 0 0 10 0 1149.5125 H7C1F9;Q2PPJ7 H7C1F9 301 310 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 yes no 2 0.0045556 74.611 By MS/MS By MS/MS 2 2 19555000 10810000 8745400 6853 1279 7829;7830 17355;17356;17357;17358 16752;16753;16754;16755 16753 459 2368 4 TYSLGSALRPSTSR SYVTTSTRTYSLGSAL ALRPSTSRSLYASSPG R T Y S R S 1 2 0 0 0 0 0 1 0 0 2 0 0 0 1 4 2 0 1 0 0 0 14 1 1494.7791 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;A0A1B0GVG8 P08670 37 50 VIM Vimentin yes no 3 0.01878 53.169 By MS/MS By MS/MS 2 2 38292000 18858000 19434000 6854 1663 7831 17359;17360;17361;17362 16756;16757 16757 3139 1 TYSLTTPAR LDRGLRKRTYSLTTPA YSLTTPARQRPVPQPS R T Y A R Q 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 3 0 1 0 0 0 9 0 1008.524 Q9Y4H2 Q9Y4H2 575 583 IRS2 Insulin receptor substrate 2 yes yes 2 0.026091 61.344 By MS/MS By matching 1 1 9816200 4705500 5110700 6855 3120 7832 17363;17364 16758 16758 6687 1 TYSYLTPDLWK ATFDAISKTYSYLTPD YLTPDLWKETVFTKSP K T Y W K E 0 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 2 1 2 0 0 0 11 0 1385.6867 H0YEN5;E9PQD7;P15880 H0YEN5 149 159 RPS2 40S ribosomal protein S2 yes no 2 0.0034152 102.07 By MS/MS By MS/MS 1 1 10876000 6073800 4802000 6856 927 7833 17365;17366 16759;16760 16760 2 TYTHEVVTLWYR RAFGVPVRTYTHEVVT EVVTLWYRAPEILLGC R T Y Y R A 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 3 1 2 2 0 0 12 0 1566.7831 G3V5T9;P24941;Q00526;K7EJ83 G3V5T9 158 169 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 2;3 0.00012547 113.53 By MS/MS By MS/MS 2 2 34973000 22777000 12196000 6857 1086 7834 17367;17368;17369;17370 16761;16762;16763;16764 16764 7174 4 TYVDPFTYEDPNQAVR KHLNQGVRTYVDPFTY EDPNQAVREFAKEIDA R T Y V R E 1 1 1 2 0 1 1 0 0 0 0 0 0 1 2 0 2 0 2 2 0 0 16 0 1913.8796 E9PG71;P54764 E9PG71 595 610 EPHA4 Receptor protein-tyrosine kinase;Ephrin type-A receptor 4 yes no 2;3 3.8055E-07 128.21 By MS/MS By MS/MS 2 1 75043000 44953000 30090000 6858 870 7835 17371;17372;17373 16765;16766;16767 16767 7107;8127 2 TYVDPHTYEDPTQAVHEFAK HLKLPGLRTYVDPHTY QAVHEFAKELDATNIS R T Y A K E 2 0 0 2 0 1 2 0 2 0 0 1 0 1 2 0 3 0 2 2 0 0 20 0 2347.0757 C9JXA2;P29320 C9JXA2 595 614 EPHA3 Receptor protein-tyrosine kinase;Ephrin type-A receptor 3 yes no 3 0.00073911 75.564 By MS/MS By MS/MS 1 1 32304000 17979000 14326000 6859 699 7836 17374;17375 16768;16769;16770;16771 16771 7041;7042;8098 4 TYYSPVYR ITPIYEGRTYYSPVYR TYYSPVYRSPNHGTVE R T Y Y R S 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 3 1 0 0 8 0 1047.5025 Q99569;A0A0D9SF60 Q99569 419 426 PKP4 Plakophilin-4 yes no 2 0.0055462 69.198 By MS/MS By matching 2 1 12192000 8527400 3664300 6860 2726 7837;7838 17376;17377;17378 16772;16773 16772 8443;8444 1 VAAAAGSGPSPPGSPGHDR QVPGGAVRVAAAAGSG PGSPGHDRERQPLLDR R V A D R E 4 1 0 1 0 0 0 4 1 0 0 0 0 0 4 3 0 0 0 1 0 0 19 0 1686.8074 Q9BTU6 Q9BTU6 38 56 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes yes 2;3 0.001058 91.883 By MS/MS By MS/MS 2 1 46645000 34658000 11987000 6861 2750 7839 17379;17380;17381 16774;16775;16776 16775 5720;5721;5722 3 VAAAAGSGPSPPGSPGHDRER QVPGGAVRVAAAAGSG SPGHDRERQPLLDRAR R V A E R Q 4 2 0 1 0 0 1 4 1 0 0 0 0 0 4 3 0 0 0 1 0 0 21 1 1971.9511 Q9BTU6 Q9BTU6 38 58 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes yes 3 2.2171E-05 97.081 By matching By MS/MS 1 1 69833000 34592000 35242000 6862 2750 7840 17382;17383 16777;16778 16778 5720;5721;5722 2 VAAETQSPSLFGSTK NSESESNKVAAETQSP PSLFGSTKLQQESTFL K V A T K L 2 0 0 0 0 1 1 1 0 0 1 1 0 1 1 3 2 0 0 1 0 0 15 0 1521.7675 Q9UKX7 Q9UKX7 215 229 NUP50 Nuclear pore complex protein Nup50 yes yes 2 7.7569E-44 190.18 By MS/MS By MS/MS 1 1 717610000 352110000 365490000 6863 3032 7841 17384;17385 16779;16780;16781;16782 16782 6387 4 VAAIEALNDGELQK MDQANDKKVAAIEALN LNDGELQKAIDLFTDA K V A Q K A 3 0 1 1 0 1 2 1 0 1 2 1 0 0 0 0 0 0 0 1 0 0 14 0 1469.7726 F6VDH7;Q3KNR6;P50502;Q8IZP2;H7C3I1 F6VDH7 82 95 ST13;ST13P4 Hsc70-interacting protein;Putative protein FAM10A4 yes no 2 4.3436E-20 154.15 By MS/MS By MS/MS 1 1 15606000 7534300 8071600 6864 996 7842 17386;17387 16783;16784 16784 2 VAASLHNTPMGARR RDKRIAKRVAASLHNT NTPMGARRRSPFRYDL R V A R R R 3 2 1 0 0 0 0 1 1 0 1 0 1 0 1 1 1 0 0 1 0 0 14 1 1479.7729 Q9ULW3 Q9ULW3 121 134 ABT1 Activator of basal transcription 1 yes yes 2 0.026435 46.819 By MS/MS 1 4779500 4779500 0 6865 3050 7843 17388 16785 16785 6436 0 VAASMPLSPGGQMEEVAGAVK IDQQQQQKVAASMPLS EEVAGAVKQISDRGPV K V A V K Q 4 0 0 0 0 1 2 3 0 0 1 1 2 0 2 2 0 0 0 3 0 0 21 0 2028.002 Q9UMN6 Q9UMN6 814 834 KMT2B Histone-lysine N-methyltransferase 2B yes yes 2;3 0.00013059 108.5 By MS/MS By MS/MS 3 3 57826000 28269000 29557000 6866 3054 7844;7845 17389;17390;17391;17392;17393;17394 16786;16787;16788;16789;16790;16791 16787 1209;1210 6447 6 VAASPKSPTAALNESLVECPK GETENREKVAASPKSP ESLVECPKCNIQYPAT K V A P K C 4 0 1 0 1 0 2 0 0 0 2 2 0 0 3 3 1 0 0 2 0 0 21 1 2168.1147 Q53EZ4 Q53EZ4 422 442 CEP55 Centrosomal protein of 55 kDa yes yes 3 0.002594 61.959 By MS/MS By matching 1 1 23133000 14402000 8730400 6867 2202 7846 17395;17396 16792 16792 4408;4409;4410;7631 1 VADAKGDSESEEDEDLEVPVPSR PPEPGPDRVADAKGDS LEVPVPSRFNRRVSVC R V A S R F 2 1 0 4 0 0 5 1 0 0 1 1 0 0 2 3 0 0 0 3 0 0 23 1 2472.114 P13861 P13861 71 93 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 2;3 0.00019015 113.67 By MS/MS By MS/MS 2 2 1729400000 757000000 972370000 6868 1697 7847 17397;17398;17399;17400 16793;16794;16795;16796;16797 16797 3198;3199 5 VADLTEQYNEQYGAVR CPIDRSGRVADLTEQY NEQYGAVRTPYTMSYG R V A V R T 2 1 1 1 0 2 2 1 0 0 1 0 0 0 0 0 1 0 2 2 0 0 16 0 1854.8748 Q9BWF3 Q9BWF3 183 198 RBM4 RNA-binding protein 4 yes yes 2 2.1493E-141 241.15 By MS/MS By MS/MS 1 1 54530000 25767000 28762000 6869 2762 7848 17401;17402 16798;16799 16799 8450 2 VADNSFDAK EEIEVDSRVADNSFDA ADNSFDAKRGAAGDWG R V A A K R 2 0 1 2 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 9 0 965.44543 A0A0A0MRM9;Q14978 A0A0A0MRM9 648 656 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0092988 104.07 By MS/MS By MS/MS 1 1 10804000 10804000 0 6870 222 7849 17403;17404 16800;16801 16800 392 2 VADNSFDAKR EEIEVDSRVADNSFDA DNSFDAKRGAAGDWGE R V A K R G 2 1 1 2 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 10 1 1121.5465 A0A0A0MRM9;Q14978 A0A0A0MRM9 648 657 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0055106 84.821 By MS/MS By matching 1 1 19705000 12449000 7256500 6871 222 7850 17405;17406 16802 16802 392 1 VADPDHDHTGFLTEYVATR ICDFGLARVADPDHDH LTEYVATRWYRAPEIM R V A T R W 2 1 0 3 0 0 1 1 2 0 1 0 0 1 1 0 3 0 1 2 0 0 19 0 2142.997 P28482 P28482 173 191 MAPK1 Mitogen-activated protein kinase 1 yes yes 2;3;4 2.9592E-44 176.28 By MS/MS By MS/MS 5 5 3021900000 1552600000 1469300000 6872 1771 7851;7852 17407;17408;17409;17410;17411;17412;17413;17414;17415;17416 16803;16804;16805;16806;16807;16808;16809;16810;16811;16812;16813;16814;16815;16816;16817;16818;16819 16807 7418;7419;8249 17 VAEDLESEGLMAEEVQAVQQQEVYGMMPR SRLKDINKVAEDLESE EVYGMMPRDETDSKTA K V A P R D 3 1 0 1 0 4 6 2 0 0 2 0 3 0 1 1 0 0 1 4 0 0 29 0 3265.4941 A0A0D9SF54;A0A0D9SGF6;Q13813 A0A0D9SF54 1133 1161 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 3;4 2.6492E-17 135.37 By MS/MS By MS/MS 3 2 262030000 134520000 127510000 6873 341 7853;7854 17417;17418;17419;17420;17421 16820;16821;16822;16823;16824;16825;16826 16823 133;134;135 8027 7 VAELALSLSSTSDDEPPSSVSHGAK PIKKQKKRVAELALSL SSVSHGAKASTTSLSG R V A A K A 3 0 0 2 0 0 2 1 1 0 3 1 0 0 2 7 1 0 0 2 0 0 25 0 2483.2027 Q5T7F5;Q8N1G2 Q5T7F5 20 44 CMTR1 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 yes no 3 9.2272E-05 77.1 By MS/MS By MS/MS 2 2 24040000 9528400 14511000 6874 2246 7855 17422;17423;17424;17425 16827;16828;16829 16827 4499;4500 3 VAELDPVNSYQAWQLATR PGTQAGRRVAELDPVN QAWQLATRGKVAEPAE R V A T R G 3 1 1 1 0 2 1 0 0 0 2 0 0 0 1 1 1 1 1 2 0 0 18 0 2060.0327 Q92618 Q92618 407 424 ZNF516 Zinc finger protein 516 yes yes 3 0.026927 43.497 By MS/MS 1 1367500 0 1367500 6875 2588 7856 17426 16830 16830 5321 0 VAFISLSPVR ________________ FISLSPVRRREAEYPG R V A V R R 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 2 0 0 0 2 0 0 10 0 1087.639 Q6ZU65 Q6ZU65 7 16 UBN2 Ubinuclein-2 yes yes 2 0.0031198 93.011 By MS/MS By MS/MS 1 1 12293000 7328900 4964600 6876 2354 7857 17427;17428 16831;16832 16832 4774 2 VAGEAAETDSEPEPEPEPTAAPR RGRPTGLRVAGEAAET PEPTAAPRDLPPLVVQ R V A P R D 5 1 0 1 0 0 6 1 0 0 0 0 0 0 5 1 2 0 0 1 0 0 23 0 2349.0608 Q6QNY0 Q6QNY0 56 78 BLOC1S3 Biogenesis of lysosome-related organelles complex 1 subunit 3 yes yes 2;3 0.0030905 77.287 By MS/MS 2 65209000 0 65209000 6877 2332 7858 17429;17430 16833;16834 16834 4710;7670 2 VAGGAAPSKPASAK AVKKKPQKVAGGAAPS PSKPASAKKGKAESSN K V A A K K 5 0 0 0 0 0 0 2 0 0 0 2 0 0 2 2 0 0 0 1 0 0 14 1 1210.667 A0A0A0MRM9;Q14978 A0A0A0MRM9 506 519 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0091696 79.885 By MS/MS 1 8300300 8300300 0 6878 222 7859 17431 16835 16835 393 1 VAGPADAPMDSGAEEEK PTKGPEGKVAGPADAP DSGAEEEKAGAATVKK K V A E K A 4 0 0 2 0 0 3 2 0 0 0 1 1 0 2 1 0 0 0 1 0 0 17 0 1672.725 Q8TEK3 Q8TEK3 364 380 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 0.020373 58.781 By MS/MS By matching 1 1 13814000 8911200 4902400 6879 2544 7860 17432;17433 16836 16836 1020 5199 0 VAGQDGSVVQFK ENDHINLKVAGQDGSV DGSVVQFKIKRHTPLS K V A F K I 1 0 0 1 0 2 0 2 0 0 0 1 0 1 0 1 0 0 0 3 0 0 12 0 1233.6354 A8MUA9;A8MU27;Q6EEV6;P61956;P55854 A8MUA9 21 32 SUMO3;SUMO4;SUMO2 Small ubiquitin-related modifier 4;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 3 yes no 2 0.0011826 109.83 By MS/MS By MS/MS 1 1 21719000 9985900 11734000 6880 495 7861 17434;17435 16837;16838 16838 2 VAKIFPLSSDIVTSR EKVIECKKVAKIFPLS SSDIVTSRQSFYDCDS K V A S R Q 1 1 0 1 0 0 0 0 0 2 1 1 0 1 1 3 1 0 0 2 0 0 15 1 1631.9247 A0A087WWI3;A0A0C4DGP9;Q3ZCX4 A0A087WWI3 94 108 ZNF568 Zinc finger protein 568 yes no 2 0.012431 65.467 By MS/MS 1 35444000 35444000 0 6881 90 7862 17436 16839 16839 159;160;6854 0 VALSDDETKETENMR KEKKRGKRVALSDDET TKETENMRKKRRRIKL R V A M R K 1 1 1 2 0 0 3 0 0 0 1 1 1 0 0 1 2 0 0 1 0 0 15 1 1736.7887 Q15054;H0YD46 Q15054 304 318 POLD3 DNA polymerase delta subunit 3 yes no 2;3 4.295E-26 164.53 By MS/MS By MS/MS 3 3 297560000 150480000 147080000 6882 2124 7863;7864 17437;17438;17439;17440;17441;17442 16840;16841;16842;16843;16844 16843 846 4201 5 VALTGLTVAEYFR EPPGARARVALTGLTV LTVAEYFRDQEGQDVL R V A F R D 2 1 0 0 0 0 1 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1438.782 H0YH81;P06576;F8W0P7 H0YH81 219 231 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 2 1.1933E-34 182.28 By MS/MS 1 3280500 0 3280500 6883 1184 7865 17443 16845 16845 1 VANSPTMVNLLLGK RKGETPLKVANSPTMV MVNLLLGKGTYTSSEE K V A G K G 1 0 2 0 0 0 0 1 0 0 3 1 1 0 1 1 1 0 0 2 0 0 14 0 1455.8119 Q6UB99;A0A087WTN8 Q6UB99 273 286 ANKRD11 Ankyrin repeat domain-containing protein 11 yes no 2 0.0013835 105.63 By MS/MS By MS/MS 1 1 9021600 4518700 4502900 6884 2337 7866 17444;17445 16846;16847;16848 16846 4721 3 VANVSLLALYK GVRFKVVKVANVSLLA VSLLALYKGKKERPRS K V A Y K G 2 0 1 0 0 0 0 0 0 0 3 1 0 0 0 1 0 0 1 2 0 0 11 0 1189.7071 P62266 P62266 125 135 RPS23 40S ribosomal protein S23 yes yes 2 0.009592 92.051 By MS/MS By MS/MS 1 1 1736700 0 1736700 6885 1938 7867 17446;17447 16849;16850 16850 2 VAPEEHPVLLTEAPLNPK HTFYNELRVAPEEHPV TEAPLNPKANREKMTQ R V A P K A 2 0 1 0 0 0 3 0 1 0 3 1 0 0 4 0 1 0 0 2 0 0 18 0 1953.0571 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8 P63261 96 113 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2 0.0032448 88.552 By MS/MS By matching 1 1 14629000 8129900 6498700 6886 1928 7868 17448;17449 16851;16852 16851 2 VAPVINNGSPTILGK LSSLTPAKVAPVINNG GSPTILGKRSYEQHNG K V A G K R 1 0 2 0 0 0 0 2 0 2 1 1 0 0 2 1 1 0 0 2 0 0 15 0 1478.8457 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 360 374 MTA1 Metastasis-associated protein MTA1 yes no 2 3.5048E-16 151.3 By MS/MS By MS/MS 4 5 153600000 83219000 70382000 6887 818 7869;7870 17450;17451;17452;17453;17454;17455;17456;17457;17458 16853;16854;16855;16856;16857;16858;16859;16860;16861 16857 32;33 1484;7084 9 VAPVINNGSPTILGKR LSSLTPAKVAPVINNG SPTILGKRSYEQHNGV K V A K R S 1 1 2 0 0 0 0 2 0 2 1 1 0 0 2 1 1 0 0 2 0 0 16 1 1634.9468 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 360 375 MTA1 Metastasis-associated protein MTA1 yes no 2;3 0.0024599 96.489 By MS/MS By MS/MS 4 4 39989000 21629000 18360000 6888 818 7871;7872 17459;17460;17461;17462;17463;17464;17465;17466 16862;16863;16864;16865;16866;16867 16863 32;33 1484;7084 5 VAQGATEKSPEDK AGDGVDTKVAQGATEK TEKSPEDKVQIAANEE K V A D K V 2 0 0 1 0 1 2 1 0 0 0 2 0 0 1 1 1 0 0 1 0 0 13 1 1358.6678 P49321 P49321 443 455 NASP Nuclear autoantigenic sperm protein yes yes 2 0.025369 93.228 By MS/MS By matching 1 1 15798000 14203000 1594500 6889 1851 7873 17467;17468 16868 16868 3562;7465 1 VAQGATEKSPEDKVQIAANEETQER AGDGVDTKVAQGATEK ANEETQEREEQMKEGE K V A E R E 4 1 1 1 0 3 5 1 0 1 0 2 0 0 1 1 2 0 0 2 0 0 25 2 2727.3311 P49321 P49321 443 467 NASP Nuclear autoantigenic sperm protein yes yes 3 0.00044792 76.796 By MS/MS By MS/MS 1 1 19281000 10908000 8372900 6890 1851 7874 17469;17470 16869;16870 16869 3562;7465 2 VAQGVSGAVQDK FSEADKIKVAQGVSGA VSGAVQDKGSIHKFVP K V A D K G 2 0 0 1 0 2 0 2 0 0 0 1 0 0 0 1 0 0 0 3 0 0 12 0 1157.6041 H0Y4R1;P12268 H0Y4R1 395 406 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 2 0.0030865 92.239 By MS/MS By MS/MS 1 1 15863000 10065000 5798000 6891 1121 7875 17471;17472 16871;16872 16871 2 VAQLEQVYIR TVTYRDGRVAQLEQVY QLEQVYIRGSKIRFLI R V A I R G 1 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 0 1 2 0 0 10 0 1217.6768 P62318 P62318 55 64 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes yes 2 0.0070895 87.308 By MS/MS By MS/MS 1 1 10345000 5686500 4658600 6892 1941 7876 17473;17474 16873;16874 16873 2 VASEAPLEHKPQVEASSPR YEELQGLKVASEAPLE QVEASSPRLNPAVTCA K V A P R L 3 1 0 0 0 1 3 0 1 0 1 1 0 0 3 3 0 0 0 2 0 0 19 1 2031.0385 Q8TD19 Q8TD19 853 871 NEK9 Serine/threonine-protein kinase Nek9 yes yes 3 0.00042276 86.488 By MS/MS By MS/MS 1 1 65108000 35745000 29363000 6893 2538 7877 17475;17476 16875;16876 16876 5183 2 VASETHSEGSEYEELPK PRAKPRRRVASETHSE SEYEELPKRRRQRGSE R V A P K R 1 0 0 0 0 0 5 1 1 0 1 1 0 0 1 3 1 0 1 1 0 0 17 0 1890.8483 Q5JSZ5 Q5JSZ5 1130 1146 PRRC2B Protein PRRC2B yes yes 2 0.015057 64.588 By MS/MS 1 9604400 9604400 0 6894 2220 7878 17477 16877 16877 4447 1 VASETHSEGSEYEELPKR PRAKPRRRVASETHSE EYEELPKRRRQRGSEN R V A K R R 1 1 0 0 0 0 5 1 1 0 1 1 0 0 1 3 1 0 1 1 0 0 18 1 2046.9494 Q5JSZ5 Q5JSZ5 1130 1147 PRRC2B Protein PRRC2B yes yes 3 0.0043325 62.684 By MS/MS By MS/MS 1 1 13982000 8880300 5101900 6895 2220 7879 17478;17479 16878;16879 16878 4447 2 VASFSIPGSSSR VDPTTKGRVASFSIPG SIPGSSSRYSLGPSLR R V A S R Y 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 5 0 0 0 1 0 0 12 0 1193.6041 Q14573 Q14573 1830 1841 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 yes yes 2 0.0013786 92.856 By MS/MS By MS/MS 1 1 10242000 5482500 4759200 6896 2092 7880 17480;17481 16880;16881 16880 4128 2 VASGVLSPPPAAPPPSSSSVPEAGGPPIKK SPKKGPKKVASGVLSP AGGPPIKKQKADSLTL K V A K K Q 4 0 0 0 0 0 1 3 0 1 1 2 0 0 9 6 0 0 0 3 0 0 30 1 2777.4963 F8W038;H0YIS7;Q8IXM2;F8W1H0 F8W038 104 133 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 3 0.011766 46.416 By MS/MS 1 8707100 8707100 0 6897 1028 7881 17482 16882 16882 1927 1 VASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPR LFDLDGPKVASPLSPT GDLSHPPRKKD_____ K V A P R K 3 2 0 1 0 1 0 1 2 0 5 0 0 0 8 6 4 0 0 2 0 0 35 1 3583.9111 I3L0Y2;I3L4Q4;Q9BUL5;I3L2W6;I3L410;I3L1N0 I3L0Y2 149 183 PHF23 PHD finger protein 23 yes no 4 0.0020439 49.98 By matching By MS/MS 1 1 36027000 4214500 31813000 6898 1303 7882 17483;17484 16883 16883 2421 1 VASPSQGQVGSSSPK TLTDAQTRVASPSQGQ QVGSSSPKRSGMTAVP R V A P K R 1 0 0 0 0 2 0 2 0 0 0 1 0 0 2 5 0 0 0 2 0 0 15 0 1414.7052 Q99569;A0A0D9SF60 Q99569 325 339 PKP4 Plakophilin-4 yes no 2 0.00088255 107.13 By MS/MS By matching 1 1 10904000 5068500 5835600 6899 2726 7883 17485;17486 16884 16884 5660 1 VASSPVMVSNPATR TTLPATVKVASSPVMV MVSNPATRMLKTAAAQ K V A T R M 2 1 1 0 0 0 0 0 0 0 0 0 1 0 2 3 1 0 0 3 0 0 14 0 1414.7238 P51610;A6NEM2 P51610 595 608 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.00095679 101.45 By MS/MS By MS/MS 2 2 145080000 74169000 70914000 6900 1877 7884;7885 17487;17488;17489;17490 16885;16886;16887;16888 16887 733 3640 4 VATLNSEEESDPPTYK GLVPQQIKVATLNSEE ESDPPTYKDAFPP___ K V A Y K D 1 0 1 1 0 0 3 0 0 0 1 1 0 0 2 2 2 0 1 1 0 0 16 0 1778.821 C9JMQ6;C9JQ82;C9JBS3;C9JEJ8;C9JHN6;C9JT62;C9JHS7;C9JK79;C9JHZ8;C9JES8;C9JZI8;C9J5E5;C9JIZ1;A0A024R4E5;Q00341 C9JMQ6 26 41 HDLBP Vigilin yes no 2 8.0634E-42 173.51 By MS/MS By MS/MS 1 1 105110000 62563000 42544000 6901 2 7886 17491;17492 16889;16890;16891 16891 3 3 VATPVDWK LQLTAEKRVATPVDWK VATPVDWKDGDSVMVL R V A W K D 1 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 1 0 2 0 0 8 0 914.48617 P30041 P30041 175 182 PRDX6 Peroxiredoxin-6 yes yes 2 2.4178E-05 97.597 By MS/MS By MS/MS 1 1 33200000 18671000 14529000 6902 1777 7887 17493;17494 16892;16893 16892 7426 0 VATPVDWKDGDSVMVLPTIPEEEAK LQLTAEKRVATPVDWK TIPEEEAKKLFPKGVF R V A A K K 2 0 0 3 0 0 3 1 0 1 1 2 1 0 3 1 2 1 0 4 0 0 25 1 2725.352 P30041 P30041 175 199 PRDX6 Peroxiredoxin-6 yes yes 3 0.0082981 49.654 By MS/MS By matching 1 1 16128000 8443900 7684200 6903 1777 7888 17495;17496 16894 16894 673 7426 1 VAVATPAKK VVVSPTKKVAVATPAK AVATPAKKAAVTPGKK K V A K K A 3 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 1 0 0 2 0 0 9 1 883.5491 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 72 80 NCL Nucleolin yes no 2 0.0090573 73.9 By MS/MS By MS/MS 1 2 51763000 25528000 26235000 6904 1732 7889 17497;17498;17499 16895;16896;16897 16896 7406 0 VAVEYLDPSPEVQK VLSSIEGRVAVEYLDP DPSPEVQKKKYAFKCH R V A Q K K 1 0 0 1 0 1 2 0 0 0 1 1 0 0 2 1 0 0 1 3 0 0 14 0 1572.8035 J3QT28;O43684 J3QT28 203 216 BUB3 Mitotic checkpoint protein BUB3 yes no 2 0.0006916 98.676 By MS/MS 1 3671800 3671800 0 6905 1363 7890 17500 16898;16899 16899 2527 2 VAVNALAVGEPGTASKPASPIGGPTQEEK PQVGVPGRVAVNALAV GGPTQEEKTRLLKERL R V A E K T 5 0 1 0 0 1 3 4 0 1 1 2 0 0 4 2 2 0 0 3 0 0 29 1 2774.445 Q96L91 Q96L91 1714 1742 EP400 E1A-binding protein p400 yes yes 3 0.00047725 62.254 By MS/MS By MS/MS 1 1 68213000 40072000 28141000 6906 2681 7891 17501;17502 16900;16901 16901 5542 2 VCAKPWAPDMTLPGISPPPEK SKLTEVPRVCAKPWAP GISPPPEKQKRKKKKM R V C E K Q 2 0 0 1 1 0 1 1 0 1 1 2 1 0 6 1 1 1 0 1 0 0 21 1 2290.149 B5MBX0;Q96FF9 B5MBX0 194 214 CDCA5 Sororin yes no 3 0.017164 62.237 By MS/MS 1 0 0 0 6907 573 7892 17503 16902 16902 230 1053 1 VCENIPIVLCGNK NWHRDLVRVCENIPIV PIVLCGNKVDIKDRKV R V C N K V 0 0 2 0 2 0 1 1 0 2 1 1 0 0 1 0 0 0 0 2 0 0 13 0 1514.7585 F5H018;B5MDF5;J3KQE5;P62826;B4DV51 F5H018 107 119 RAN GTP-binding nuclear protein Ran yes no 2 0.00087446 115.78 By MS/MS By matching 1 1 13037000 6886000 6150900 6908 580 7893 17504;17505 16903 16903 1 VCTISPAPR APEPPAKRVCTISPAP CTISPAPRHSPALTVP R V C P R H 1 1 0 0 1 0 0 0 0 1 0 0 0 0 2 1 1 0 0 1 0 0 9 0 999.51715 O43439 O43439 260 268 CBFA2T2 Protein CBFA2T2 yes yes 2 0.0092727 79.07 By MS/MS By MS/MS 1 1 10270000 5584100 4685500 6909 1500 7894 17506;17507 16904;16905 16904 2800 2 VCTLAIIDPGDSDIIR TACGKYYRVCTLAIID PGDSDIIRSMPEQTGE R V C I R S 1 1 0 3 1 0 0 1 0 4 1 0 0 0 1 1 1 0 0 1 0 0 16 0 1756.9029 E5RI99;P62888;A0A0C4DH44;A0A0B4J213 E5RI99 91 106 RPL30 60S ribosomal protein L30 yes no 2 4.1117E-10 140.31 By MS/MS By MS/MS 1 1 28961000 14057000 14904000 6910 783 7895 17508;17509 16906;16907 16907 2 VDAAPGIPPAVESIQDSPLPK KDAASSTKVDAAPGIP IQDSPLPKKAEGDLGP K V D P K K 3 0 0 2 0 1 1 1 0 2 1 1 0 0 5 2 0 0 0 2 0 0 21 0 2100.1103 Q15814 Q15814 152 172 TBCC Tubulin-specific chaperone C yes yes 2;3 1.4223E-14 133.15 By MS/MS By MS/MS 2 2 19517000 9074700 10442000 6911 2158 7896 17510;17511;17512;17513 16908;16909;16910;16911;16912 16910 4282;4283 5 VDAQFGGIDQR ALDEEYLKVDAQFGGI QFGGIDQRKIFTFAEK K V D Q R K 1 1 0 2 0 2 0 2 0 1 0 0 0 1 0 0 0 0 0 1 0 0 11 0 1204.5836 P54577;A0A0C4DGZ5 P54577 179 189 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 2 0.015525 77.662 By MS/MS By matching 1 1 7848100 4073000 3775000 6912 1903 7897 17514;17515 16913 16913 1 VDDDSLGEFPVTNSR KRGAPDPRVDDDSLGE EFPVTNSRARKRILEP R V D S R A 0 1 1 3 0 0 1 1 0 0 1 0 0 1 1 2 1 0 0 2 0 0 15 0 1649.7533 J3KMZ8;Q92785 J3KMZ8 138 152 DPF2 Zinc finger protein ubi-d4 yes no 2 2.4543E-21 146.1 By MS/MS 1 0 0 0 6913 1316 7898 17516 16914 16914 2444 1 VDDKPSSPGDSSK ERERGTSRVDDKPSSP SSPGDSSKKRGPKPRK R V D S K K 0 0 0 3 0 0 0 1 0 0 0 2 0 0 2 4 0 0 0 1 0 0 13 1 1317.6048 Q9HC52;C9JM54;C9J6K3 Q9HC52 185 197 CBX8 Chromobox protein homolog 8 yes no 2 0.0027651 90.913 By matching By MS/MS 1 1 15500000 4350900 11149000 6914 2871 7899 17517;17518 16915 16915 6045 1 VDEFPLCGHMVSDEYEQLSSEALEAAR DLGRKKAKVDEFPLCG SEALEAARICANKYMV K V D A R I 3 1 0 2 1 1 5 1 1 0 3 0 1 1 1 3 0 0 1 2 0 0 27 0 3081.3696 B8A6G2;A6QRI9;X1WI28;P27635 B8A6G2 26 52 RPL10 60S ribosomal protein L10 yes no 3 0.0022328 57.051 By MS/MS 1 3466300 0 3466300 6915 490 7900 17519 16916 16916 191 892 1 VDENFDCVEADDVEGK FRVEYASKVDENFDCV EADDVEGKIRQIIPPG K V D G K I 1 0 1 4 1 0 3 1 0 0 0 1 0 1 0 0 0 0 0 3 0 0 16 0 1839.7469 O14929 O14929 95 110 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 0.010436 76.868 By MS/MS 1 4137300 0 4137300 6916 1461 7901 17520 16917 16917 1 VDFLRSLNLSGVPSQDK KMFLENVKVDFLRSLN SGVPSQDKTRVEPPQY K V D D K T 0 1 1 2 0 1 0 1 0 0 3 1 0 1 1 3 0 0 0 2 0 0 17 1 1873.9898 Q9UK05 Q9UK05 64 80 GDF2 Growth/differentiation factor 2 yes yes 2 0.013554 71.153 By MS/MS 1 0 0 0 6917 3016 7902 17521 16918 16918 6347 1 VDGETASDSESRAESAPLPVSADDTPEVLNR KESESEAKVDGETASD DTPEVLNRALSNLSSR K V D N R A 4 2 1 4 0 0 4 1 0 0 2 0 0 0 3 5 2 0 0 3 0 0 31 1 3213.4909 O95674 O95674 27 57 CDS2 Phosphatidate cytidylyltransferase 2 yes yes 3 0.00021705 65.795 By MS/MS By MS/MS 1 1 15769000 6890600 8878100 6918 1604 7903 17522;17523 16919;16920 16920 3039;7358 2 VDGIPNDSSDSEMEDK LQEPSSFRVDGIPNDS SDSEMEDKTTANLAAL R V D D K T 0 0 1 4 0 0 2 1 0 1 0 1 1 0 1 3 0 0 0 1 0 0 16 0 1736.7047 Q9H6S0 Q9H6S0 1082 1097 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 2 0.00031482 110.04 By MS/MS By MS/MS 2 2 61202000 33222000 27979000 6919 2843 7904;7905 17524;17525;17526;17527 16921;16922;16923 16923 1130 5982;5983 3 VDGPRSPSYGR ETAYIRVKVDGPRSPS PRSPSYGRSRSRSRSR K V D G R S 0 2 0 1 0 0 0 2 0 0 0 0 0 0 2 2 0 0 1 1 0 0 11 1 1189.584 J3KSR8;J3KTL2;Q07955 J3KSR8 89 99 SRSF1 Serine/arginine-rich splicing factor 1 yes no 3 0.027867 47.971 By matching By MS/MS 1 1 46607000 27078000 19529000 6920 1339 7906 17528;17529 16924 16924 2479;2480 1 VDGPRSPSYGRSR ETAYIRVKVDGPRSPS SPSYGRSRSRSRSRSR K V D S R S 0 3 0 1 0 0 0 2 0 0 0 0 0 0 2 3 0 0 1 1 0 0 13 2 1432.7171 J3KSR8;J3KTL2;Q07955 J3KSR8 89 101 SRSF1 Serine/arginine-rich splicing factor 1 yes no 2 0.022564 54.811 By MS/MS 1 30428000 30428000 0 6921 1339 7907 17530 16925 16925 2479;2480;2481 0 VDGRGNPNATSK AEALLDSRVDGRGNPN GNPNATSKAGTKADQR R V D S K A 1 1 2 1 0 0 0 2 0 0 0 1 0 0 1 1 1 0 0 1 0 0 12 1 1214.6004 F8W8Y7 F8W8Y7 566 577 ARMCX4 yes yes 2 0.0046008 66.004 By matching By MS/MS 1 1 10304000 5943000 4361300 6922 1038 7908 17531;17532 16926 16926 46;47 1959;7164 1 VDLHTSGEHSELVQEENLSPGTQTPSNDK PFNIAEPRVDLHTSGE TQTPSNDKASMLQEYS R V D D K A 0 0 2 2 0 2 4 2 2 0 3 1 0 0 2 4 3 0 0 2 0 0 29 0 3147.4592 Q9Y2X9 Q9Y2X9 633 661 ZNF281 Zinc finger protein 281 yes yes 3 0.021723 40.15 By MS/MS 1 6102700 6102700 0 6923 3099 7909 17533 16927 16927 6659 1 VDNDENEHQLSLR ADKDYHFKVDNDENEH NEHQLSLRTVSLGAGA K V D L R T 0 1 2 2 0 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1567.7227 P06748;E5RGW4 P06748 33 45 NPM1 Nucleophosmin yes no 2;3 0.0019465 120.87 By MS/MS By MS/MS 3 2 58774000 31064000 27710000 6924 1647 7910;7911 17534;17535;17536;17537;17538 16928;16929;16930;16931 16930 70 4 VDNLTYRTSPDSLR VDGMITLKVDNLTYRT RTSPDSLRRVFEKYGR K V D L R R 0 2 1 2 0 0 0 0 0 0 2 0 0 0 1 2 2 0 1 1 0 0 14 1 1635.8216 Q9BRL6 Q9BRL6 18 31 SRSF8 Serine/arginine-rich splicing factor 8 yes yes 3 0.025234 49.483 By matching By MS/MS 1 1 9634000 5809900 3824100 6925 2743 7912 17539;17540 16932 16932 5699 1 VDNLTYRTSPDTLR VEGMTSLKVDNLTYRT RTSPDTLRRVFEKYGR K V D L R R 0 2 1 2 0 0 0 0 0 0 2 0 0 0 1 1 3 0 1 1 0 0 14 1 1649.8373 Q01130;J3QL05;J3KP15 Q01130 18 31 SRSF2 Serine/arginine-rich splicing factor 2 yes no 2;3 1.8836E-09 137.73 By MS/MS By matching 2 1 452570000 315480000 137090000 6926 1978 7913 17541;17542;17543 16933;16934 16933 3795;7513 2 VDNLTYRTSPDTLRR VEGMTSLKVDNLTYRT TSPDTLRRVFEKYGRV K V D R R V 0 3 1 2 0 0 0 0 0 0 2 0 0 0 1 1 3 0 1 1 0 0 15 2 1805.9384 Q01130;J3QL05;J3KP15 Q01130 18 32 SRSF2 Serine/arginine-rich splicing factor 2 yes no 3 0.010755 70.802 By MS/MS By MS/MS 1 1 179720000 88038000 91677000 6927 1978 7914 17544;17545 16935;16936 16936 3795;7513 2 VDPSLMEDSDDGPSLPTK FIAFLSPKVDPSLMED DGPSLPTKQNEEFRPF K V D T K Q 0 0 0 4 0 0 1 1 0 0 2 1 1 0 3 3 1 0 0 1 0 0 18 0 1901.8564 Q5T092;A0A0A0MR06;Q5T091;O15258 Q5T092 87 104 RER1 Protein RER1 yes no 2 0.0011538 91.065 By MS/MS By MS/MS 1 1 12609000 7345400 5263700 6928 196 7915 17546;17547 16937;16938 16937 349 2 VDQSILTGESVSVIK SIKSTTLRVDQSILTG GESVSVIKHTDPVPDP R V D I K H 0 0 0 1 0 1 1 1 0 2 1 1 0 0 0 3 1 0 0 3 0 0 15 0 1573.8563 P16615;O14983 P16615 175 189 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 2 0.018936 56.793 By matching By MS/MS 1 1 8102000 4743100 3358900 6929 1710 7916 17548;17549 16939 16939 3215;3216 0 VDSEGDFSENDDAAGDFR EPDTKLARVDSEGDFS DDAAGDFRSGDEEFKG R V D F R S 2 1 1 5 0 0 2 2 0 0 0 0 0 2 0 2 0 0 0 1 0 0 18 0 1944.761 M0QYL4;O43823 M0QYL4 135 152 AKAP8 A-kinase anchor protein 8 yes no 2 0.0069725 103.9 By MS/MS 1 0 0 0 6930 1407 7917 17550 16940 16940 2581;2582 1 VDSLLENLEK ELTQIKQKVDSLLENL SLLENLEKIEKEQSKQ K V D E K I 0 0 1 1 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 1 0 0 10 0 1158.6132 G3V2Q1;P07910;G3V5V7;G3V576;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4C1;B2R5W2;G3V2D6;G3V4W0;B4DY08 G3V4C1 207 216 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 no no 2 0.0026023 119.75 By MS/MS By MS/MS 1 1 2755200 0 2755200 6931 1069;1079 7918 17551;17552 16941;16942;16943 16943 3 VDSPLPSDKAPTPPGK DEEESGAKVDSPLPSD KAPTPPGKGAAPESSL K V D G K G 1 0 0 2 0 0 0 1 0 0 1 2 0 0 5 2 1 0 0 1 0 0 16 1 1604.841 Q12893 Q12893 318 333 TMEM115 Transmembrane protein 115 yes yes 2;3 0.0022284 77.74 By MS/MS By MS/MS 3 4 108440000 50893000 57550000 6932 2032 7919;7920 17553;17554;17555;17556;17557;17558;17559 16944;16945;16946;16947;16948 16945 3977;3978;7542 5 VDSPSHGLVTSSLCIPSPAR PVADSSTRVDSPSHGL LCIPSPARLSQTPHSQ R V D A R L 1 1 0 1 1 0 0 1 1 1 2 0 0 0 3 5 1 0 0 2 0 0 20 0 2079.0419 Q9UER7 Q9UER7 686 705 DAXX Death domain-associated protein 6 yes yes 2;3 2.2377E-05 107.24 By MS/MS By MS/MS 5 5 123320000 61974000 61348000 6933 2997 7921;7922 17560;17561;17562;17563;17564;17565;17566;17567;17568;17569 16949;16950;16951;16952;16953;16954;16955;16956;16957 16954 6301;6302;6303 9 VDSPTVNTTLR GSWYKACKVDSPTVNT PTVNTTLRSLGALYRR K V D L R S 0 1 1 1 0 0 0 0 0 0 1 0 0 0 1 1 3 0 0 2 0 0 11 0 1201.6303 Q9H0B6;A8MZ87 Q9H0B6 443 453 KLC2 Kinesin light chain 2 yes no 2 0.017681 66.989 By matching By MS/MS 1 1 26644000 11429000 15215000 6934 2800 7923 17570;17571 16958 16958 5849 1 VDSSTNSSPSPQQSESLSPAHTSDFR VSDVYQLKVDSSTNSS PAHTSDFRTDDSQPPT K V D F R T 1 1 1 2 0 2 1 0 1 0 1 0 0 1 3 9 2 0 0 1 0 0 26 0 2747.2271 F2Z3H6;Q9BQE9 F2Z3H6 116 141 BCL7B B-cell CLL/lymphoma 7 protein family member B yes no 3 0.0015111 72.805 By MS/MS By MS/MS 1 2 56180000 20001000 36180000 6935 937 7924;7925 17572;17573;17574 16959;16960 16960 1757;1758;1759 2 VDSTTCLFPVEEK KGSCNLSRVDSTTCLF CLFPVEEKAVEYYFAS R V D E K A 0 0 0 1 1 0 2 0 0 0 1 1 0 1 1 1 2 0 0 2 0 0 13 0 1523.7178 Q06210 Q06210 259 271 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 9.2493E-58 201.76 By MS/MS By MS/MS 1 1 953240000 509300000 443930000 6936 2007 7926 17575;17576 16961;16962 16962 3869 2 VDTQPNVLHNDPHAR FSILLGEKVDTQPNVL LHNDPHARHSDDNGQN K V D A R H 1 1 2 2 0 1 0 0 2 0 1 0 0 0 2 0 1 0 0 2 0 0 15 0 1711.839 C9JDX1;C9K0C8;Q9NS00 C9JDX1 35 49 C1GALT1 Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 yes no 2 0.029632 55.353 By MS/MS 1 0 0 0 6937 657 7927 17577 16963 16963 1 VDTTLSDSYNYSGTENLK GIKELGIKVDTTLSDS YSGTENLKDKKIFNQL K V D L K D 0 0 2 2 0 0 1 1 0 0 2 1 0 0 0 3 3 0 2 1 0 0 18 0 2005.9116 Q7Z3T8 Q7Z3T8 211 228 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 2 0.01274 66.708 By matching By MS/MS 1 1 10798000 6437700 4360400 6938 2378 7928 17578;17579 16964 16964 8380 0 VDVKSPK AGPDAALKVDVKSPKT KVDVKSPKTKKTMFGK K V D P K T 0 0 0 1 0 0 0 0 0 0 0 2 0 0 1 1 0 0 0 2 0 0 7 1 771.44905 Q09666 Q09666 5073 5079 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.016944 85.29 By MS/MS 1 0 0 0 6939 2020 7929 17580 16965 16965 3919 1 VDVSCEPLEGVEK DVKEPSPRVDVSCEPL EPLEGVEKCSDSQSWE R V D E K C 0 0 0 1 1 0 3 1 0 0 1 1 0 0 1 1 0 0 0 3 0 0 13 0 1459.6865 Q12888;A6NNK5;C9JXV0;H7C3N7 Q12888 768 780 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 8.6469E-10 137.8 By MS/MS By MS/MS 1 1 30745000 16275000 14471000 6940 2031 7930 17581;17582 16966;16967 16966 3976 2 VDVTEQPGLSGR DLEVNIAKVDVTEQPG EQPGLSGRFIITALPT K V D G R F 0 1 0 1 0 1 1 2 0 0 1 0 0 0 1 1 1 0 0 2 0 0 12 0 1256.6361 Q9H3N1;G3V448 Q9H3N1 83 94 TMX1 Thioredoxin-related transmembrane protein 1 yes no 2 0.021935 73.841 By MS/MS 1 2486300 2486300 0 6941 2827 7931 17583 16968 16968 1 VDYVVVDQQK GSSVADERVDYVVVDQ YVVVDQQKTLALKSTR R V D Q K T 0 0 0 2 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 4 0 0 10 0 1191.6136 B7Z3B9;Q13480 B7Z3B9 554 563 GAB1 GRB2-associated-binding protein 1 yes no 2 0.0013127 133.99 By matching By MS/MS 1 1 23648000 14254000 9394500 6942 588 7932 17584;17585 16969 16969 8083 1 VEAKEESEESDEDMGFGLFD AAAAAPAKVEAKEESE DMGFGLFD________ K V E F D - 1 0 0 3 0 0 6 2 0 0 1 1 1 2 0 2 0 0 0 1 0 0 20 1 2261.9158 F8VWS0;Q8NHW5;P05388;F8W1K8 F8VWS0 262 281 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2 0.0043525 71.842 By MS/MS 1 0 0 0 6943 1020 7933 17586 16970 16970 367 1908;1909 1 VEEEQEADEEDVSEEEAESK ESAQPLKKVEEEQEAD SEEEAESKEGTNKDFP K V E S K E 2 0 0 2 0 1 10 0 0 0 0 1 0 0 0 2 0 0 0 2 0 0 20 0 2308.919 Q9H3N1 Q9H3N1 235 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 1.6392E-103 218.22 By MS/MS By MS/MS 2 2 171530000 78713000 92819000 6944 2827 7934 17587;17588;17589;17590 16971;16972;16973 16971 5929 3 VEEESTGDPFGFDSDDESLPVSSK QEIPKKPKVEEESTGD ESLPVSSKNLAQVKCS K V E S K N 0 0 0 4 0 0 4 2 0 0 1 1 0 2 2 5 1 0 0 2 0 0 24 0 2572.0977 Q7Z5K2 Q7Z5K2 64 87 WAPAL Wings apart-like protein homolog yes yes 2;3 1.0885E-48 180.45 By MS/MS By MS/MS 2 2 425330000 196650000 228680000 6945 2390 7935 17591;17592;17593;17594 16974;16975;16976;16977 16976 4863 4 VEENPDADSDFDAK CILQTDVKVEENPDAD ADSDFDAKSSADDEIE K V E A K S 2 0 1 4 0 0 2 0 0 0 0 1 0 1 1 1 0 0 0 1 0 0 14 0 1550.6373 Q9H0G5;A0A024QZ33 Q9H0G5 240 253 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 yes no 2 0.0013242 104.26 By MS/MS By matching 1 1 15827000 8247800 7579400 6946 2802 7936 17595;17596 16978 16978 5861 1 VEGDNIYVR EGKKNSLRVEGDNIYV EGDNIYVRHSNLMLEE R V E V R H 0 1 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 2 0 0 9 0 1063.5298 O43491;H0Y5B0;E9PMV8;E9PPC9;Q6ZSX4 O43491 617 625 EPB41L2 Band 4.1-like protein 2 yes no 2 0.0079286 101.54 By MS/MS By MS/MS 1 1 645950000 325210000 320740000 6947 1502 7937 17597;17598 16979;16980 16979 8200 2 VEIEPTMSVPTKAYNQK V E Q K 1 0 1 0 0 1 2 0 0 1 0 2 1 0 2 1 2 0 1 2 0 0 17 1 1933.9819 REV__A0A0U1RQY0 yes no 2 0.032356 66.56 By MS/MS By matching 2 1 55118000 38110000 17008000 + 6948 3166 7938 17599;17600;17601 16981 16981 1257 1 VEILANDQGNR VGVFQQGRVEILANDQ LANDQGNRTTPSYVAF R V E N R T 1 1 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1227.6208 P17066;P48741 P17066 28 38 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 yes no 2 0.0015815 109.66 By matching By MS/MS 1 1 91204000 42182000 49022000 6949 1711 7939 17602;17603 16982 16982 1 VELECETIKQENTR GLNEEIARVELECETI TIKQENTRLQNIIDNQ R V E T R L 0 1 1 0 1 1 4 0 0 1 1 1 0 0 0 0 2 0 0 1 0 0 14 1 1747.8411 O14777 O14777 338 351 NDC80 Kinetochore protein NDC80 homolog yes yes 3 0.011002 63.062 By MS/MS 1 45993000 0 45993000 6950 1457 7940 17604 16983 16983 7292 1 VELKSEANDAVNSSTK YSEEENSKVELKSEAN DAVNSSTKEEKGEEKP K V E T K E 2 0 2 1 0 0 2 0 0 0 1 2 0 0 0 3 1 0 0 2 0 0 16 1 1690.8374 O15234;K7EQ38 O15234 113 128 CASC3 Protein CASC3 yes no 2 3.2934E-15 146.28 By MS/MS By MS/MS 1 1 17010000 10477000 6532500 6951 1477 7941 17605;17606 16984;16985 16984 2763 2 VELQELNDR KNTRTNEKVELQELND ELQELNDRFANYIDKV K V E D R F 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1114.5619 P08670;B0YJC4;A0A1B0GUA0;A0A1B0GTT5;P17661 P08670 105 113 VIM;DES Vimentin;Desmin yes no 2 0.0025908 122.33 By MS/MS By MS/MS 1 1 49358000 28064000 21294000 6952 1663 7942 17607;17608 16986;16987 16987 2 VELRVSCHGLLDRDTLTK TMTLGASRVELRVSCH LDRDTLTKPHPCVLLK R V E T K P 0 2 0 2 1 0 1 1 1 0 4 1 0 0 0 1 2 0 0 2 0 0 18 2 2111.1157 H0YNV2;H0YNV6;H0YM67;H0YNP2;H0YNX4;H0YNM7;H0YKJ0;H0YLM2;H0YKP1;H0YLV2;O95741 H0YNV2 22 39 CPNE6 Copine-6 yes no 3 0.024591 46.337 By MS/MS By matching 1 1 202280000 100640000 101640000 6953 1202 7943 17609;17610 16988 16988 2245 1 VEMGTSSQNDVDMSWIPQETLNQINKASPR KRKRPIQKVEMGTSSQ QINKASPRRLPRKRAQ K V E P R R 1 1 3 2 0 3 2 1 0 2 1 1 2 0 2 4 2 1 0 2 0 0 30 1 3374.5871 C9JBX5;P43307 C9JBX5 173 202 SSR1 Translocon-associated protein subunit alpha yes no 3;4 0.00013229 68.231 By MS/MS By MS/MS 3 4 209250000 125890000 83362000 6954 656 7944;7945;7946 17611;17612;17613;17614;17615;17616;17617 16989;16990;16991;16992;16993;16994 16994 254;255 1220;7027 6 VEMYSGSDDDDDFNK SKKTAKPKVEMYSGSD DDDDDFNKLPKKAKGK K V E N K L 0 0 1 5 0 0 1 1 0 0 0 1 1 1 0 2 0 0 1 1 0 0 15 0 1735.6519 A0A087WUT6;O60841 A0A087WUT6 131 145 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0033349 86.214 By MS/MS 1 0 0 0 6955 60 7947 17618 16995 16995 22 107;108;7979 1 VEMYSGSDDDDDFNKLPK SKKTAKPKVEMYSGSD DDFNKLPKKAKGKAQK K V E P K K 0 0 1 5 0 0 1 1 0 0 1 2 1 1 1 2 0 0 1 1 0 0 18 1 2073.8837 A0A087WUT6;O60841 A0A087WUT6 131 148 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0018454 75.533 By MS/MS By MS/MS 1 1 48868000 25667000 23201000 6956 60 7948 17619;17620 16996;16997 16996 107;108;7979 2 VENSPQVDGSPPGLEGLLGGIGEK RRAEASARVENSPQVD LLGGIGEKGVHRPAPR R V E E K G 0 0 1 1 0 1 3 6 0 1 3 1 0 0 3 2 0 0 0 2 0 0 24 0 2348.186 E7EXA6;A0A0D9SF58;Q8WVB6 E7EXA6 862 885 CHTF18 Chromosome transmission fidelity protein 18 homolog yes no 2;3 0.0013846 69.649 By MS/MS By MS/MS 2 2 44666000 21644000 23022000 6957 342 7949 17621;17622;17623;17624 16998;16999;17000;17001 16999 606 4 VEPVPVTKQPTPPSEAAASK ASKIPGKKVEPVPVTK PSEAAASKKKPGQKKS K V E S K K 3 0 0 0 0 1 2 0 0 0 0 2 0 0 5 2 2 0 0 3 0 0 20 1 2032.0841 Q86UP2 Q86UP2 143 162 KTN1 Kinectin yes yes 3 0.018405 52.162 By matching By MS/MS 1 1 17864000 9265500 8598600 6958 2402 7950 17625;17626 17002 17002 7695 1 VEQALSEVASSLQSSAPK ATSVAASRVEQALSEV SLQSSAPKQGPLHPWM R V E P K Q 3 0 0 0 0 2 2 0 0 0 2 1 0 0 1 5 0 0 0 2 0 0 18 0 1829.9371 H0YK02;H0YJS2;A0A0C4DGK5;Q86TV6 H0YK02 77 94 TTC7B Tetratricopeptide repeat protein 7B yes no 2;3 3.0351E-10 140.8 By MS/MS By MS/MS 2 2 21152000 10761000 10391000 6959 322 7951 17627;17628;17629;17630 17003;17004;17005;17006 17004 564;565 4 VEQMPQASPGLAPR SGELVEPRVEQMPQAS ASPGLAPRTRGSSGPQ R V E P R T 2 1 0 0 0 2 1 1 0 0 1 0 1 0 3 1 0 0 0 1 0 0 14 0 1479.7504 Q8N3F8;H0Y6J8 Q8N3F8 571 584 MICALL1 MICAL-like protein 1 yes no 2 0.00042873 104.94 By MS/MS By MS/MS 3 3 58972000 28644000 30328000 6960 2466 7952;7953 17631;17632;17633;17634;17635;17636 17007;17008;17009;17010;17011;17012 17007 998 5041 6 VEQQPSVEGAAALR PDPCRAPRVEQQPSVE VEGAAALRSCPMCQKE R V E L R S 3 1 0 0 0 2 2 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 14 0 1453.7525 H7C3A6;H7C2E6;H7C361;Q6NZ36 H7C3A6 84 97 C1orf86;FAAP20 Fanconi anemia-associated protein of 20 kDa yes no 2 0.0023033 87.001 By MS/MS By matching 1 1 10405000 5778000 4627200 6961 1281 7954 17637;17638 17013;17014 17014 2369 2 VERPPSPFSMAPQASLPPVPPR MKELAGAKVERPPSPF SLPPVPPRLDLLPQRV K V E P R L 2 2 0 0 0 1 1 0 0 0 1 0 1 1 8 3 0 0 0 2 0 0 22 1 2356.2362 P22681;A0A1B0GW38;A0A0U1RQX8 P22681 478 499 CBL E3 ubiquitin-protein ligase CBL yes no 3 0.00020189 85.177 By MS/MS By MS/MS 3 4 62406000 31912000 30494000 6962 1751 7955 17639;17640;17641;17642;17643;17644;17645 17015;17016;17017;17018;17019;17020;17021;17022 17017 660 3306;3307 8 VESGYFSLEK MDCGRKVRVESGYFSL SGYFSLEKTKQDLKAE R V E E K T 0 0 0 0 0 0 2 1 0 0 1 1 0 1 0 2 0 0 1 1 0 0 10 0 1157.5605 Q6WCQ1;J3KSW8 Q6WCQ1 263 272 MPRIP Myosin phosphatase Rho-interacting protein yes no 2 0.013132 94.538 By MS/MS 1 0 0 0 6963 2345 7956 17646 17023 17023 4752 1 VETGVLKPGMVVTFAPVNVTTEVK IGTVPVGRVETGVLKP VNVTTEVKSVEMHHEA R V E V K S 1 0 1 0 0 0 2 2 0 0 1 2 1 1 2 0 4 0 0 7 0 0 24 1 2514.3767 Q5VTE0;P68104;A0A087WVQ9 Q5VTE0 267 290 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 3 1.8329E-05 102.46 By MS/MS By MS/MS 2 2 68349000 46184000 22165000 6964 1956 7957;7958 17647;17648;17649;17650 17024;17025;17026;17027 17026 770 4 VETPSHPGGVSEEFWER DRHYRSARVETPSHPG VSEEFWERSRQRERER R V E E R S 0 1 0 0 0 0 4 2 1 0 0 0 0 1 2 2 1 1 0 2 0 0 17 0 1941.8857 Q92620;H3BQT9 Q92620 115 131 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes no 3 0.00011524 109.36 By MS/MS By MS/MS 1 1 44564000 24389000 20175000 6965 2589 7959 17651;17652 17028;17029 17029 7759 2 VETVKSDNKDDDIDIDAI SKAASVPKVETVKSDN DDIDIDAI________ K V E A I - 1 0 1 6 0 0 1 0 0 3 0 2 0 0 0 1 1 0 0 2 0 0 18 2 2003.9535 P55010 P55010 414 431 EIF5 Eukaryotic translation initiation factor 5 yes yes 3 0.030478 57.973 By MS/MS By matching 1 1 14379000 6338500 8041000 6966 1905 7960 17653;17654 17030 17030 1 VEVTEFEDIK EALHYLTRVEVTEFED VTEFEDIKSGYRIDFY R V E I K S 0 0 0 1 0 0 3 0 0 1 0 1 0 1 0 0 1 0 0 2 0 0 10 0 1207.5972 Q01105;A0A0C4DFV9;A0A087X027;P0DME0 Q01105 123 132 SET;SETSIP Protein SET;Protein SETSIP yes no 2 0.00040725 120.99 By MS/MS By MS/MS 1 1 27627000 15927000 11701000 6967 1977 7961 17655;17656 17031;17032 17031 2 VEVTEFEDIKSGYR EALHYLTRVEVTEFED EDIKSGYRIDFYFDEN R V E Y R I 0 1 0 1 0 0 3 1 0 1 0 1 0 1 0 1 1 0 1 2 0 0 14 1 1670.8152 Q01105;A0A0C4DFV9;A0A087X027;P0DME0 Q01105 123 136 SET;SETSIP Protein SET;Protein SETSIP yes no 2 0.0057605 84.859 By MS/MS By MS/MS 1 1 9557200 5731600 3825600 6968 1977 7962 17657;17658 17033;17034 17033 3788 2 VEVTSPNLDVSLPSMEVDIQAPGAKLDSTR KLDLKGPKVEVTSPNL GAKLDSTRLEGDLSLA K V E T R L 2 1 1 3 0 1 2 1 0 1 3 1 1 0 3 4 2 0 0 4 0 0 30 1 3167.602 Q8IVF2 Q8IVF2 4415 4444 AHNAK2 Protein AHNAK2 yes yes 3 0.02633 52.722 By MS/MS 1 0 0 0 6969 2426 7963 17659 17035 17035 981 4961 1 VFDDESDEKEDEEYADEK EEEDTYEKVFDDESDE DEEYADEKGLEAADKK K V F E K G 1 0 0 5 0 0 6 0 0 0 0 2 0 1 0 1 0 0 1 1 0 0 18 1 2190.8601 O43719 O43719 637 654 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0 285.1 By MS/MS 1 0 0 0 6970 1505 7964 17660 17036 17036 2826 1 VFDDESDEKEDEEYADEKGLEAADK EEEDTYEKVFDDESDE KGLEAADKKAEEGDAD K V F D K K 3 0 0 6 0 0 7 1 0 0 1 3 0 1 0 1 0 0 1 1 0 0 25 2 2875.2043 O43719 O43719 637 661 HTATSF1 HIV Tat-specific factor 1 yes yes 3 6.6481E-06 109.12 By MS/MS By MS/MS 1 1 37297000 17818000 19479000 6971 1505 7965 17661;17662 17037;17038 17038 2826 2 VFDEFKPLVEEPQNLIK DPHECYAKVFDEFKPL EEPQNLIKQNCELFEQ K V F I K Q 0 0 1 1 0 1 3 0 0 1 2 2 0 2 2 0 0 0 0 2 0 0 17 1 2044.0881 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;H0YA55;D6RHD5;A0A087WWT3 B7WNR0 282 298 ALB Serum albumin yes no 3 0.024361 103.13 By MS/MS 1 6464300 6464300 0 + 6972 314 7966 17663 17039 17039 1 VFDKDGNGYISAAELR EEIREAFRVFDKDGNG YISAAELRHVMTNLGE R V F L R H 2 1 1 2 0 0 1 2 0 1 1 1 0 1 0 1 0 0 1 1 0 0 16 1 1753.8635 P0DP25;P0DP24;P0DP23;E7ETZ0;H0Y7A7;E7EMB3;Q96HY3;G3V361 P0DP25 92 107 CALM1;CALM2 yes no 2;3 2.0345E-64 198.29 By MS/MS By MS/MS 5 6 112930000 58677000 54255000 6973 788 7967;7968;7969 17664;17665;17666;17667;17668;17669;17670;17671;17672;17673;17674 17040;17041;17042;17043;17044;17045;17046;17047;17048;17049;17050;17051 17048 28 1403;8118 12 VFDLQFSTDSPR RLQRRRSRVFDLQFST QFSTDSPRLLASPSSR R V F P R L 0 1 0 2 0 1 0 0 0 0 1 0 0 2 1 2 1 0 0 1 0 0 12 0 1410.6779 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 61 72 NCAPH Condensin complex subunit 2 yes no 2 0.00047092 111.66 By MS/MS By MS/MS 1 1 15176000 9890900 5285500 6974 634 7970 17675;17676 17052;17053 17053 1186 2 VFFQSPR GASGGGARVFFQSPRG RVFFQSPRGGAGGSPG R V F P R G 0 1 0 0 0 1 0 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 7 0 879.46029 Q8TAE6 Q8TAE6 21 27 PPP1R14C Protein phosphatase 1 regulatory subunit 14C yes yes 2 0.025716 93.598 By matching By MS/MS 1 1 10094000 5439800 4653900 6975 2531 7971 17677;17678 17054 17054 5168 1 VFGALGPIGPSSPGLTLGGLAVSEHR ________________ GLAVSEHRLSNKLLAW R V F H R L 2 1 0 0 0 0 1 6 1 1 4 0 0 1 3 3 1 0 0 2 0 0 26 0 2488.3438 M0QZB9;M0QYQ4;M0QYH7;A0A0C4DGR2;M0QY25;Q86YD1 M0QZB9 5 30 PTOV1 Prostate tumor-overexpressed gene 1 protein yes no 3 1.0826E-06 106.35 By MS/MS 1 9835100 0 9835100 6976 325 7972 17679 17055 17055 567;568 1 VFIDQNLSPGK IEANGELKVFIDQNLS DQNLSPGKGVVSLVAV K V F G K G 0 0 1 1 0 1 0 1 0 1 1 1 0 1 1 1 0 0 0 1 0 0 11 0 1216.6452 F5H452;Q5JSB6;Q5JSB5;Q14186 F5H452 16 26 TFDP1 Transcription factor Dp-1 yes no 2 0.00069456 110.15 By MS/MS By MS/MS 1 1 14582000 7025500 7556500 6977 970 7973 17680;17681 17056;17057;17058 17056 1824 3 VFIDQNLSPGKGVVSLVAVHPSTVNPLGK IEANGELKVFIDQNLS STVNPLGKQLLPKTFG K V F G K Q 1 0 2 1 0 1 0 3 1 1 3 2 0 1 3 3 1 0 0 6 0 0 29 1 2971.6495 F5H452;Q5JSB6;Q5JSB5;Q14186 F5H452 16 44 TFDP1 Transcription factor Dp-1 yes no 3 4.6562E-07 84.159 By MS/MS By MS/MS 1 1 34121000 13938000 20183000 6978 970 7974 17682;17683 17059;17060 17060 1824;1825 2 VFIGNLNTLVVK DPRSMNSRVFIGNLNT NLNTLVVKKSDVEAIF R V F V K K 0 0 2 0 0 0 0 1 0 1 2 1 0 1 0 0 1 0 0 3 0 0 12 0 1315.7864 G3V2Q1;P07910;G3V576;G3V555;G3V575;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V4M8;B4DSU6;G3V2H6;G3V4C1;B2R5W2;G3V4W0;B4DY08;G3V5X6;G3V3K6;G3V251 G3V4C1 18 29 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 no no 2 0.00026129 121.5 By MS/MS By MS/MS 1 1 9296900 5844700 3452200 6979 1069;1079 7975 17684;17685 17061;17062 17061 2 VFIPHGLIMDR HYAEDLERVFIPHGLI PHGLIMDRTERLARDV R V F D R T 0 1 0 1 0 0 0 1 1 2 1 0 1 1 1 0 0 0 0 1 0 0 11 0 1296.7013 P00492 P00492 35 45 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 3 0.011364 65.5 By MS/MS 1 0 0 0 6980 1623 7976 17686 17063 17063 582 1 VFLENVIR EETRGVLKVFLENVIR VFLENVIRDAVTYTEH K V F I R D 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 8 0 988.57057 P62805 P62805 61 68 HIST1H4A Histone H4 yes yes 2 3.3018E-13 177.71 By MS/MS By MS/MS 1 1 173620000 86515000 87107000 6981 1945 7977 17687;17688 17064;17065 17065 2 VFPEPTESGDEGEELGLPLLSTR LATASGQRVFPEPTES GLPLLSTRHVHLECRL R V F T R H 0 1 0 1 0 0 5 3 0 0 4 0 0 1 3 2 2 0 0 1 0 0 23 0 2471.2068 E9PMG4;Q9BUR4 E9PMG4 451 473 WRAP53 Telomerase Cajal body protein 1 yes no 2;3 2.4332E-05 98.508 By MS/MS By MS/MS 2 2 89503000 54117000 35386000 6982 913 7978 17689;17690;17691;17692 17066;17067;17068 17067 1699 3 VFQFLNAK RYARTDGKVFQFLNAK VFQFLNAKCESAFLSK K V F A K C 1 0 1 0 0 1 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 0 8 0 965.53345 C9JXB8;C9JNW5;P83731 C9JXB8 28 35 RPL24 60S ribosomal protein L24 yes no 2 0.0045515 123.99 By MS/MS By MS/MS 1 1 5691200 5691200 0 6983 679 7979 17693;17694 17069;17070 17070 2 VFSGLVSTGLK GRFYAFGRVFSGLVST GLVSTGLKVRIMGPNY R V F L K V 0 0 0 0 0 0 0 2 0 0 2 1 0 1 0 2 1 0 0 2 0 0 11 0 1106.6336 P13639 P13639 416 426 EEF2 Elongation factor 2 yes yes 2 0.0045662 89.08 By matching By MS/MS 1 1 15130000 8459600 6670800 6984 1693 7980 17695;17696 17071 17071 1 VFSYSSSLMVHQRTHTGEK YECNECGKVFSYSSSL QRTHTGEKPYKCNDCG K V F E K P 0 1 0 0 0 1 1 1 2 0 1 1 1 1 0 4 2 0 1 2 0 0 19 1 2193.0637 Q9P0L1 Q9P0L1 671 689 ZKSCAN7 Zinc finger protein with KRAB and SCAN domains 7 yes yes 2 0.025975 56.951 By MS/MS 1 0 0 0 6985 2966 7981 17697 17072 17072 1179 6246;6247 1 VGAGAPVYLAAVLEYLTAEILELAGNAAR RKGNYSERVGAGAPVY ELAGNAARDNKKTRII R V G A R D 8 1 1 0 0 0 3 3 0 1 5 0 0 0 1 0 1 0 2 3 0 0 29 0 2914.5804 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;P20671;P0C0S8;H0YFX9;Q93077;Q7L7L0;P04908;Q8IUE6;P16104 A0A0U1RR32 44 72 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST1H2AD;HIST1H2AG;HIST1H2AC;HIST3H2A;HIST1H2AB;HIST2H2AB;H2AFX Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 1-D;Histone H2A type 1;Histone H2A;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 2-B;Histone H2AX yes no 2;3 2.7335E-09 97.904 By MS/MS By matching 2 1 7844400 6079900 1764500 6986 394 7982 17698;17699;17700 17073;17074 17073 2 VGALDVPASQFLGSATSPGPR MSGGHGLRVGALDVPA SATSPGPRTAPAAKPE R V G P R T 3 1 0 1 0 1 0 3 0 0 2 0 0 1 3 3 1 0 0 2 0 0 21 0 2026.0484 H3BMQ0;P49815 H3BMQ0 1106 1126 TSC2 Tuberin yes no 3 0.0028731 73.984 By MS/MS 1 0 0 0 6987 1230 7983 17701 17075 17075 2299 1 VGDGDLSAEEIPENEVSLR TMEEQKTKVGDGDLSA PENEVSLRRAVSKKKT K V G L R R 1 1 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 0 19 0 2027.9647 Q14684 Q14684 239 257 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2;3 1.7416E-71 198.98 By MS/MS By MS/MS 2 2 323980000 179140000 144840000 6988 2102 7984 17702;17703;17704;17705 17076;17077;17078;17079 17077 4162 4 VGDGDLSAEEIPENEVSLRR TMEEQKTKVGDGDLSA ENEVSLRRAVSKKKTA K V G R R A 1 2 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 0 20 1 2184.0659 Q14684 Q14684 239 258 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 3 0.00010906 93.738 By MS/MS By MS/MS 1 1 80095000 43727000 36369000 6989 2102 7985 17706;17707 17080;17081 17081 4162 2 VGDPPQPLPEEPMEVQGAERASPEPQR AILRYVRRVGDPPQPL RASPEPQRENASPAPG R V G Q R E 2 2 0 1 0 3 5 2 0 0 1 0 1 0 7 1 0 0 0 2 0 0 27 1 2939.4083 A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379;H0Y710 A0A0G2JL47 937 963 BAT3;BAG6 Large proline-rich protein BAG6 yes no 3 0.0013369 61.903 By MS/MS By MS/MS 2 2 315880000 139540000 176340000 6990 6 7986;7987 17708;17709;17710;17711 17082;17083;17084;17085 17085 2 8 4 VGDSQNPLLSDGDLSTMIGK KATKDPSRVGDSQNPL DLSTMIGKGTGAASFD R V G G K G 0 0 1 3 0 1 0 3 0 1 3 1 1 0 1 3 1 0 0 1 0 0 20 0 2045.9939 B1APE1;B1APE2;Q00403 B1APE1 66 85 GTF2B Transcription initiation factor IIB yes no 2 0.003059 62.792 By MS/MS By matching 1 1 9655700 5457400 4198300 6991 530 7988 17712;17713 17086 17086 210 995 1 VGDSTPVSEKPVSAAVDANASESP APTTVEDRVGDSTPVS DANASESP________ R V G S P - 4 0 1 2 0 0 2 1 0 0 0 1 0 0 3 5 1 0 0 4 0 0 24 1 2313.0972 Q9H8Y8 Q9H8Y8 429 452 GORASP2 Golgi reassembly-stacking protein 2 yes yes 2;3 3.0297E-08 128.8 By MS/MS By MS/MS 4 4 207100000 94082000 113010000 6992 2858 7989 17714;17715;17716;17717;17718;17719;17720;17721 17087;17088;17089;17090;17091;17092;17093 17088 6022 7 VGDTEKPEPERSPPNR EPKARPLRVGDTEKPE PERSPPNRKRPANEKA R V G N R K 0 2 1 1 0 0 3 1 0 0 0 1 0 0 4 1 1 0 0 1 0 0 16 2 1806.886 Q9NZ63 Q9NZ63 250 265 C9orf78 Uncharacterized protein C9orf78 yes yes 3;4 0.0031348 79.614 By MS/MS By matching 2 2 72045000 61842000 10203000 6993 2955 7990 17722;17723;17724;17725 17094;17095 17094 6229 2 VGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVK VGTQSAGKVGEDEDGS SLPEVEVKSGEEDEEI K V G V K S 0 0 1 4 0 0 8 2 2 2 1 1 0 1 2 2 0 0 0 6 0 0 32 0 3589.6584 P49792 P49792 2893 2924 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 3;4 5.9484E-16 131.64 By MS/MS By MS/MS 2 2 484360000 215080000 269280000 6994 1860 7991 17726;17727;17728;17729 17096;17097;17098;17099 17098 3611 2 VGEEEHVYSFPNK SVGSPCSRVGEEEHVY HVYSFPNKQKSAEPSP R V G N K Q 0 0 1 0 0 0 3 1 1 0 0 1 0 1 1 1 0 0 1 2 0 0 13 0 1533.71 F5GZ78;A0A1B0GTU4;P49023;F5H836;A0A1B0GU60 F5GZ78 109 121 PXN Paxillin yes no 2;3 7.4042E-12 152.54 By MS/MS By MS/MS 2 2 90126000 48261000 41866000 6995 414 7992 17730;17731;17732;17733 17100;17101;17102;17103;17104 17101 772;8046 5 VGEFSGANK QFFKKGQKVGEFSGAN GEFSGANKEKLEATIN K V G N K E 1 0 1 0 0 0 1 2 0 0 0 1 0 1 0 1 0 0 0 1 0 0 9 0 907.43995 P10599 P10599 86 94 TXN Thioredoxin yes yes 2 0.023654 76.774 By MS/MS By matching 1 1 11726000 5784700 5941400 6996 1675 7993 17734;17735 17105 17105 1 VGEVTYVELLMDAEGK LKDLVKEKVGEVTYVE LLMDAEGKSRVSVVVE K V G G K S 1 0 0 1 0 0 3 2 0 0 2 1 1 0 0 0 1 0 1 3 0 0 16 0 1751.8652 A0A087X0X3;P52272;M0R019;M0R0N3;M0R2T0 A0A087X0X3 95 110 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 2.0919E-06 128.85 By MS/MS 1 2337100 0 2337100 6997 163 7994 17736 17106 17106 68 1 VGGSDEEASGIPSR LEGMKKARVGGSDEEA EASGIPSRTASLELGE R V G S R T 1 1 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 14 0 1359.6266 A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55;H7C446 A8MV53 303 316 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 1;2;3 5.4958E-43 188.92 By MS/MS By MS/MS 3 2 1296400000 680520000 615830000 6998 283 7995 17737;17738;17739;17740;17741 17107;17108;17109;17110;17111;17112 17107 502 5 VGGSSVDLHR YGPQPQVRVGGSSVDL GSSVDLHRFHPEPYGL R V G H R F 0 1 0 1 0 0 0 2 1 0 1 0 0 0 0 2 0 0 0 2 0 0 10 0 1025.5254 C9JZR2;O60716;E9PRE2 C9JZR2 265 274 CTNND1 Catenin delta-1 yes no 2 0.0022678 105.36 By MS/MS By MS/MS 2 2 72397000 40343000 32054000 6999 706 7996 17742;17743;17744;17745 17113;17114;17115;17116 17116 1310;1311 4 VGGTSDVEVNEK SDGVAVLKVGGTSDVE SDVEVNEKKDRVTDAL K V G E K K 0 0 1 1 0 0 2 2 0 0 0 1 0 0 0 1 1 0 0 3 0 0 12 0 1232.5885 P10809 P10809 406 417 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.00054222 116.77 By MS/MS By MS/MS 1 1 32893000 15367000 17526000 7000 1677 7997 17746;17747 17117;17118 17118 2 VGHMSSVELDDELLDPDMDPPHPFPK SPRSALFRVGHMSSVE DPPHPFPKEIPHNEKL R V G P K E 0 0 0 5 0 0 2 1 2 0 3 1 2 1 5 2 0 0 0 2 0 0 26 0 2916.331 H3BNG8;P51798 H3BNG8 21 46 CLCN7 H(+)/Cl(-) exchange transporter 7 yes no 3 2.7527E-07 114.87 By MS/MS By MS/MS 3 3 82330000 47278000 35051000 7001 1234 7998;7999 17748;17749;17750;17751;17752;17753 17119;17120;17121;17122;17123;17124;17125 17119 445;446 2304;2305 6 VGINYQPPTVVPGGDLAK DWCPTGFKVGINYQPP VPGGDLAKVQRAVCML K V G A K V 1 0 1 1 0 1 0 3 0 1 1 1 0 0 3 0 1 0 1 3 0 0 18 0 1823.9781 F5H5D3;Q9BQE3;C9J2C0;Q9NY65;V9GZ17;P68363;P68366;Q71U36;Q6PEY2;Q13748 P68363 423 440 TUBA1C;TUBA8;TUBA1B;TUBA4A;TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain no no 2 0.00044924 99.161 By MS/MS By MS/MS 1 1 58392000 24903000 33489000 7002 976;1957;2360 8000 17754;17755 17126;17127 17126 2 VGKEDSSSTEFVEK IVGMTKVKVGKEDSSS SSTEFVEKRRAALERY K V G E K R 0 0 0 1 0 0 3 1 0 0 0 2 0 1 0 3 1 0 0 2 0 0 14 1 1540.7257 O60749;D6RC15 O60749 221 234 SNX2 Sorting nexin-2 yes no 2 0.012836 77.068 By MS/MS By matching 1 1 9522500 5098800 4423700 7003 1525 8001 17756;17757 17128 17128 2880 1 VGKTMFVDLLAVGGMIDSTMWSCSCR ILVKERWKVGKTMFVD TMWSCSCRVGIWQIFA K V G C R V 1 1 0 2 2 0 0 3 0 1 2 1 3 1 0 3 2 1 0 3 0 0 26 1 2920.3414 H3BMY7 H3BMY7 23 48 TTBK2 yes yes 3 0.014642 49.515 By MS/MS 1 4688700 4688700 0 7004 1231 8002 17758 17129 17129 443 2301;7226 1 VGLMCEGAPMRAHSPILNMEGTKIGTVTSGCPSPSLK KGRVQRRRVGLMCEGA GCPSPSLKKNVAMGYV R V G L K K 2 1 1 0 2 0 2 5 1 2 3 2 3 0 4 4 3 0 0 2 0 0 37 2 3882.8923 A0A1B0GV07;A0A1B0GWC4;A0A1B0GTB6;H0Y695;A0A1B0GVP5;B3KTU4;A0A1B0GTA8;A0A1B0GTM2;A0A1B0GUH1;P48728 A0A1B0GV07 48 84 AMT Aminomethyltransferase;Aminomethyltransferase, mitochondrial yes no 3 0.027838 41.933 By MS/MS 1 16828000 16828000 0 7005 409 8003 17759 17130 17130 159;160 751;752 0 VGLQVVAVK TLVLNRLKVGLQVVAV GLQVVAVKAPGFGDNR K V G V K A 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 4 0 0 9 0 911.5804 P10809 P10809 293 301 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0031048 143.85 By MS/MS By MS/MS 1 1 24665000 12534000 12132000 7006 1677 8004 17760;17761 17131;17132 17131 2 VGLSPDSPAGDR LTYSQLPRVGLSPDSP PDSPAGDRNSVGSEGS R V G D R N 1 1 0 2 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 1 0 0 12 0 1169.5677 Q8WXE0 Q8WXE0 390 401 CASKIN2 Caskin-2 yes yes 2 0.015643 68.626 By MS/MS By MS/MS 1 1 7535700 3638500 3897200 7007 2568 8005 17762;17763 17133;17134 17134 5262 2 VGLSPDSPAGDRNSVGSEGSVGSIR LTYSQLPRVGLSPDSP EGSVGSIRSAGSGQSS R V G I R S 1 2 1 2 0 0 1 5 0 1 1 0 0 0 2 6 0 0 0 3 0 0 25 1 2399.1677 Q8WXE0 Q8WXE0 390 414 CASKIN2 Caskin-2 yes yes 3 0.00067748 68.401 By MS/MS 1 17956000 0 17956000 7008 2568 8006 17764 17135 17135 5262;5263 1 VGNESPVQELK ETENTAYKVGNESPVQ ESPVQELKQDVSKKII K V G L K Q 0 0 1 0 0 1 2 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 11 0 1198.6194 Q5JSH3 Q5JSH3 46 56 WDR44 WD repeat-containing protein 44 yes yes 2 1.4973E-09 156.52 By MS/MS By MS/MS 1 1 231560000 114210000 117340000 7009 2219 8007 17765;17766 17136;17137 17136 4437 2 VGQGYVYEAAQPEQDEYDIPR AKVVVPTRVGQGYVYE QDEYDIPRHLLAPGPQ R V G P R H 2 1 0 2 0 3 3 2 0 1 0 0 0 0 2 0 0 0 3 2 0 0 21 0 2426.1026 P56945;H3BN62 P56945 218 238 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 2 0.0004581 91.845 By MS/MS By MS/MS 1 2 35550000 9325700 26224000 7010 1919 8008;8009 17767;17768;17769 17138;17139;17140;17141 17141 8307;8308 3 VGQQAIVLCISPSKPNPVFK TLDEYTTRVGQQAIVL SKPNPVFKVFGAAPLE R V G F K V 1 0 1 0 1 2 0 1 0 2 1 2 0 1 3 2 0 0 0 3 0 0 20 1 2181.198 C9JP85;Q16656 C9JP85 126 145 NRF1 Nuclear respiratory factor 1 yes no 3 0.00026841 87.419 By MS/MS By MS/MS 1 1 16156000 9836500 6319600 7011 681 8010 17770;17771 17142;17143;17144 17144 1257 3 VGSDTRASCK LTRFSQHKVGSDTRAS SDTRASCKMLLILLSV K V G C K M 1 1 0 1 1 0 0 1 0 0 0 1 0 0 0 2 1 0 0 1 0 0 10 1 1079.503 A0A087WZY1 A0A087WZY1 69 78 yes yes 1 0.024522 46.844 By matching By MS/MS 1 1 3484000 1694900 1789100 7012 149 8011 17772;17773 17145 17145 245 1 VGSHPEGGASWLSTAANFLSR EQDKAVSRVGSHPEGG TAANFLSRSFYW____ R V G S R S 3 1 1 0 0 0 1 3 1 0 2 0 0 1 1 4 1 1 0 1 0 0 21 0 2143.0447 Q9NVT9 Q9NVT9 258 278 ARMC1 Armadillo repeat-containing protein 1 yes yes 3 0.00017611 83.666 By MS/MS 1 4593900 4593900 0 7013 2927 8012 17774 17146 17146 6180 1 VGSLDNVGHLPAGGAVK FKEKAQAKVGSLDNVG LPAGGAVKTEGGGSEA K V G V K T 2 0 1 1 0 0 0 4 1 0 2 1 0 0 1 1 0 0 0 3 0 0 17 0 1589.8526 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4 E7EVA0 2216 2232 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 2.6283E-25 163 By MS/MS By MS/MS 2 2 705080000 370870000 334210000 7014 828 8013 17775;17776;17777;17778 17147;17148;17149;17150 17149 1542 4 VGSLPLEKGSPVTTTK AEAIPEGKVGSLPLEK GSPVTTTKADPRASGK K V G T K A 0 0 0 0 0 0 1 2 0 0 2 2 0 0 2 2 3 0 0 2 0 0 16 1 1612.9036 Q7Z2K8 Q7Z2K8 606 621 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 3 0.00058566 88.283 By MS/MS By MS/MS 1 1 14978000 9855500 5122300 7015 2372 8014 17779;17780 17151;17152;17153 17152 4806 3 VGSLTPPSSPK PPAVQGQKVGSLTPPS LTPPSSPKTQRAGHRR K V G P K T 0 0 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 1 0 0 11 0 1068.5815 E9PG46;Q2M2I8 E9PG46 616 626 AAK1 AP2-associated protein kinase 1 yes no 2 0.0013767 104.81 By MS/MS By MS/MS 1 1 72509000 38071000 34437000 7016 869 8015 17781;17782 17154;17155;17156;17157;17158 17154 1599;7106 5 VGSPATVTFQQNK TKMVLTTKVGSPATVT TVTFQQNKNFHQTFAT K V G N K N 1 0 1 0 0 2 0 1 0 0 0 1 0 1 1 1 2 0 0 2 0 0 13 0 1375.7096 E7ETD6;Q12830;F5GXF5;J3QQK4 E7ETD6 1957 1969 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.0014115 105.66 By MS/MS 1 15844000 15844000 0 7017 819 8016 17783 17159 17159 1487 1 VGSPLDYSLVDLPSTNGQSPGK EDFENVGKVGSPLDYS TNGQSPGKAIENLIGK K V G G K A 0 0 1 2 0 1 0 3 0 0 3 1 0 0 3 4 1 0 1 2 0 0 22 0 2230.1117 Q96T23 Q96T23 1357 1378 RSF1 Remodeling and spacing factor 1 yes yes 2 1.1692E-46 172.54 By MS/MS By MS/MS 1 2 33782000 13447000 20335000 7018 2714 8017;8018 17784;17785;17786 17160;17161;17162 17160 125 5618;5619 3 VGSPLTLTDAQTR PQYQTTARVGSPLTLT TLTDAQTRVASPSQGQ R V G T R V 1 1 0 1 0 1 0 1 0 0 2 0 0 0 1 1 3 0 0 1 0 0 13 0 1357.7201 Q99569;A0A0D9SF60 Q99569 312 324 PKP4 Plakophilin-4 yes no 2 0.00092834 101.61 By MS/MS By MS/MS 1 1 42145000 20680000 21465000 7019 2726 8019 17787;17788 17163;17164;17165 17165 5661 3 VGSTENIK DLKNVRSKVGSTENIK VGSTENIKHQPGGGRA K V G I K H 0 0 1 0 0 0 1 1 0 1 0 1 0 0 0 1 1 0 0 1 0 0 8 0 846.4447 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4 E7EVA0 2084 2091 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.018686 74.533 By matching By MS/MS 1 1 21218000 11867000 9350600 7020 828 8020 17789;17790 17166 17166 1539;7097 1 VGSTKVPMTSGVK IDRCTHIRVGSTKVPM VPMTSGVKQKIMSVIR R V G V K Q 0 0 0 0 0 0 0 2 0 0 0 2 1 0 1 2 2 0 0 3 0 0 13 1 1289.7013 P16615;H7C5W9 P16615 529 541 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 2 0.01168 66.595 By MS/MS 1 0 0 0 7021 1710 8021 17791 17167 17167 641 3217;7398 1 VGTEGLVDSFSQGLER ________________ SFSQGLERSYAVSSSV R V G E R S 0 1 0 1 0 1 2 3 0 0 2 0 0 1 0 2 1 0 0 2 0 0 16 0 1692.8319 T1ECW5;O75170 T1ECW5 7 22 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 2 0.00023512 112.3 By MS/MS By matching 1 1 9073400 4444600 4628800 7022 1540 8022 17792;17793 17168 17168 2910 1 VGTIDDDPEYR KTKKRDTKVGTIDDDP IDDDPEYRKFLESYAT K V G Y R K 0 1 0 3 0 0 1 1 0 1 0 0 0 0 1 0 1 0 1 1 0 0 11 0 1278.5728 A0A087WYC8;Q9BZI7 A0A087WYC8 151 161 UPF3B Regulator of nonsense transcripts 3B yes no 2 0.0036945 91.658 By MS/MS By matching 1 1 20009000 10996000 9012800 7023 121 8023 17794;17795 17169 17169 7990 1 VGVEASEETPQTSSSSARPGTPSDHQSQEASQFER KEGEKTDRVGVEASEE QEASQFERKDEPKTEQ R V G E R K 3 2 0 1 0 4 5 2 1 0 0 0 0 1 3 8 3 0 0 2 0 0 35 1 3702.663 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1 I1E4Y6 384 418 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 3;4 0.0076083 42.825 By MS/MS By MS/MS 2 2 835190000 445060000 390140000 7024 1298 8024 17796;17797;17798;17799 17170;17171 17170 2409;7240 2 VGVNGFGR ________________ VGVNGFGRIGRLVTRA K V G G R I 0 1 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 2 0 0 8 0 804.42424 P04406 P04406 6 13 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 0.028762 79.939 By MS/MS By MS/MS 2 2 30235000 13441000 16793000 7025 1635 8025;8026 17800;17801;17802;17803 17172;17173 17173 2 VHAYFAPVTPPPSVGGSR RTHLPNIKVHAYFAPV PPSVGGSRQRFCRCCI K V H S R Q 2 1 0 0 0 0 0 2 1 0 0 0 0 1 4 2 1 0 1 3 0 0 18 0 1837.9475 J3KTA1;Q96IG2 J3KTA1 411 428 FBXL20 F-box/LRR-repeat protein 20 yes no 2;3 0.0023566 92.38 By MS/MS By MS/MS 2 2 31571000 17373000 14198000 7026 1340 8027 17804;17805;17806;17807 17174;17175;17176 17174 7252 3 VHLVGIDIFTGK TGKHGHAKVHLVGIDI GIDIFTGKKYEDICPS K V H G K K 0 0 0 1 0 0 0 2 1 2 1 1 0 1 0 0 1 0 0 2 0 0 12 0 1297.7394 I3L397;I3L504;P63241;Q6IS14;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 I3L397 56 67 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 3 0.0019093 98.156 By MS/MS By MS/MS 1 1 2901400 2901400 0 7027 1311 8028 17808;17809 17177;17178 17178 2 VHSEAISPAPEEK IVHAVGERVHSEAISP ISPAPEEKAVTLRSLR R V H E K A 2 0 0 0 0 0 3 0 1 1 0 1 0 0 2 2 0 0 0 1 0 0 13 0 1392.6885 Q9BY89 Q9BY89 743 755 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.024984 62.298 By matching By MS/MS 1 1 10550000 6177800 4371900 7028 2777 8029 17810;17811 17179 17179 5781 1 VHSPPASLVPR TDTAEEQRVHSPPASL PPASLVPRIHVILAQK R V H P R I 1 1 0 0 0 0 0 0 1 0 1 0 0 0 3 2 0 0 0 2 0 0 11 0 1158.6509 Q9BTE3 Q9BTE3 296 306 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 3 0.0071336 71.976 By MS/MS By MS/MS 1 1 0 0 0 7029 2748 8030 17812;17813 17180;17181 17181 5715 2 VHVQFFDDSPTR REKGKSVRVHVQFFDD FFDDSPTRGWVSKRLL R V H T R G 0 1 0 2 0 1 0 0 1 0 0 0 0 2 1 1 1 0 0 2 0 0 12 0 1446.6892 P52701;A0A087WWJ1;C9J7Y7;F8WAX8;U3KQ72;C9JH55;C9J8Y8 P52701 129 140 MSH6 DNA mismatch repair protein Msh6 yes no 2;3 6.7374E-27 180.95 By MS/MS By MS/MS 2 2 127270000 69748000 57521000 7030 1888 8031 17814;17815;17816;17817 17182;17183;17184;17185;17186 17185 3661 5 VIDPATATSVDLR MSVNAVMKVIDPATAT TATSVDLRDIKIVKKL K V I L R D 2 1 0 2 0 0 0 0 0 1 1 0 0 0 1 1 2 0 0 2 0 0 13 0 1356.7249 P50991 P50991 194 206 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0091756 82.494 By MS/MS By matching 1 1 9083600 4621600 4461900 7031 1872 8032 17818;17819 17187 17187 1 VIEDDPEAVYTTTGGK VSDFGLSRVIEDDPEA VYTTTGGKIPVRWTAP R V I G K I 1 0 0 2 0 0 2 2 0 1 0 1 0 0 1 0 3 0 1 2 0 0 16 0 1693.8047 Q15375 Q15375 782 797 EPHA7 Ephrin type-A receptor 7 yes yes 3 0.00036613 91.657 By MS/MS By MS/MS 1 1 9118700 5422300 3696400 7032 2135 8033 17820;17821 17188;17189 17188 7599;8348 2 VIEDDPEAVYTTTGGKIPVR VSDFGLSRVIEDDPEA TGGKIPVRWTAPEAIQ R V I V R W 1 1 0 2 0 0 2 2 0 2 0 1 0 0 2 0 3 0 1 3 0 0 20 1 2159.111 Q15375 Q15375 782 801 EPHA7 Ephrin type-A receptor 7 yes yes 3 0.00021194 102.5 By MS/MS By MS/MS 1 1 26961000 14341000 12619000 7033 2135 8034 17822;17823 17190;17191 17190 7599;8348 2 VIEDNEYTAR IADFGLARVIEDNEYT EDNEYTAREGAKFPIK R V I A R E 1 1 1 1 0 0 2 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 10 0 1208.5673 P07948;H0Y3C5;J3KPD6;P08631 P07948 391 400 LYN;HCK Tyrosine-protein kinase Lyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase HCK yes no 2 0.0068605 85.862 By MS/MS 1 35094000 0 35094000 7034 1657 8035 17824 17192 17192 8223 1 VIEEEWQQVDR PFHESILKVIEEEWQQ EEWQQVDRQLPSLACK K V I D R Q 0 1 0 1 0 2 3 0 0 1 0 0 0 0 0 0 0 1 0 2 0 0 11 0 1429.6838 P42166 P42166 501 511 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.0086342 83.869 By MS/MS By MS/MS 1 1 7387900 4622000 2765900 7035 1823 8036 17825;17826 17193;17194 17193 2 VIETPENDFK RVNCRREKVIETPEND ETPENDFKHHRSQNHS K V I F K H 0 0 1 1 0 0 2 0 0 1 0 1 0 1 1 0 1 0 0 1 0 0 10 0 1190.5819 Q9H0G5;A0A024QZ33 Q9H0G5 272 281 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 yes no 2 0.00027798 147.58 By MS/MS By MS/MS 1 1 34378000 18037000 16341000 7036 2802 8037 17827;17828 17195;17196 17195 7844 2 VIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGK KTCFSPNRVIGLSSDL AEDVLSGKVSADNTVG R V I G K V 4 1 0 3 0 4 1 4 0 2 5 1 0 0 0 5 1 0 1 4 0 0 36 1 3687.9319 O00303;H0YDT6 O00303 262 297 EIF3F Eukaryotic translation initiation factor 3 subunit F yes no 3 0.021991 40.545 By matching By MS/MS 1 1 19261000 13038000 6222500 7037 1433 8038 17829;17830 17197 17197 2634;2635;2636 1 VIGSGCNLDSAR LSGLPKHRVIGSGCNL GCNLDSARFRYLMAEK R V I A R F 1 1 1 1 1 0 0 2 0 1 1 0 0 0 0 2 0 0 0 1 0 0 12 0 1247.5928 P00338;P07195;A8MW50 P07195 159 170 LDHA;LDHB L-lactate dehydrogenase A chain;L-lactate dehydrogenase B chain;L-lactate dehydrogenase no no 2 0.00026129 121.5 By MS/MS By MS/MS 1 1 51895000 30069000 21826000 7038 1649;1621 8039 17831;17832 17198;17199 17199 2 VIISAPSADAPMFVMGVNHEK HLQGGAKRVIISAPSA VMGVNHEKYDNSLKII R V I E K Y 3 0 1 1 0 0 1 1 1 2 0 1 2 1 2 2 0 0 0 3 0 0 21 0 2212.102 P04406;E7EUT5 P04406 119 139 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 3 0.025261 45.916 By MS/MS 1 4918900 4918900 0 7039 1635 8040 17833 17200 17200 586 1 VIKDEALSDGDDLR TVKSENLKVIKDEALS LSDGDDLRDFPSDLKK K V I L R D 1 1 0 4 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 1 0 0 14 1 1544.7682 E7EUB5;Q01831 E7EUB5 81 94 XPC DNA repair protein complementing XP-C cells yes no 2 0.0013033 107.63 By MS/MS By MS/MS 1 1 57890000 32463000 25428000 7040 824 8041 17834;17835 17201;17202 17201 1521 2 VIKQSSLQK IKWFGNTRVIKQSSLQ IKQSSLQKFQEEMDTV R V I Q K F 0 0 0 0 0 2 0 0 0 1 1 2 0 0 0 2 0 0 0 1 0 0 9 1 1029.6182 Q13823 Q13823 86 94 GNL2 Nucleolar GTP-binding protein 2 yes yes 2 0.0088712 73.248 By matching By MS/MS 1 1 4535100 2093700 2441400 7041 2076 8042 17836;17837 17203 17203 4095 0 VINEPTAAALAYGLDK ISGLNVLRVINEPTAA ALAYGLDKSEDKVIAV R V I D K S 4 0 1 1 0 0 1 1 0 1 2 1 0 0 1 0 1 0 1 1 0 0 16 0 1644.8723 P38646 P38646 219 234 HSPA9 Stress-70 protein, mitochondrial yes yes 2 6.845E-05 122.46 By MS/MS By MS/MS 1 1 12571000 8890300 3681100 7042 1808 8043 17838;17839 17204;17205 17204 2 VINEPTAAALAYGLDKSEDK ISGLNVLRVINEPTAA GLDKSEDKVIAVYDLG R V I D K V 4 0 1 2 0 0 2 1 0 1 2 2 0 0 1 1 1 0 1 1 0 0 20 1 2104.0688 P38646 P38646 219 238 HSPA9 Stress-70 protein, mitochondrial yes yes 3 0.00018117 97.271 By MS/MS 1 4401600 4401600 0 7043 1808 8044 17840 17206 17206 1 VIPELNGK GAAKAVGKVIPELNGK VIPELNGKLTGMAFRV K V I G K L 0 0 1 0 0 0 1 1 0 1 1 1 0 0 1 0 0 0 0 1 0 0 8 0 868.50182 P04406;E7EUT5 P04406 220 227 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.015608 89.369 By MS/MS By MS/MS 1 1 19823000 7472600 12351000 7044 1635 8045 17841;17842 17207;17208 17208 2 VIQPMGMSPR APFPNRNRVIQPMGMS QPMGMSPRGHLTSLQD R V I P R G 0 1 0 0 0 1 0 1 0 1 0 0 2 0 2 1 0 0 0 1 0 0 10 0 1114.5627 H0YE35;Q9NPQ8 H0YE35 111 120 RIC8A Synembryn-A yes no 2 0.016055 68.224 By MS/MS By MS/MS 2 2 24911000 11633000 13277000 7045 1173 8046;8047 17843;17844;17845;17846 17209;17210;17211 17211 423 2218 3 VIQSVANYAK NLKDTSSKVIQSVANY QSVANYAKGDLDISYI K V I A K G 2 0 1 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 2 0 0 10 0 1091.5975 O14976 O14976 396 405 GAK Cyclin-G-associated kinase yes yes 2 0.012104 74.92 By MS/MS By matching 1 1 8133100 4314600 3818500 7046 1464 8048 17847;17848 17212 17212 8192 0 VIQYLAYVASSHK GKTENTKKVIQYLAYV AYVASSHKSKKDQGEL K V I H K S 2 0 0 0 0 1 0 0 1 1 1 1 0 0 0 2 0 0 2 2 0 0 13 0 1477.7929 P35579;Q5BKV1 P35579 187 199 MYH9 Myosin-9 yes no 3 0.0042158 77.527 By MS/MS 1 0 0 0 7047 1795 8049 17849 17213 17213 1 VISAPVSDATPDYAVVTALPPTSTPPTPPLR APPPSYAKVISAPVSD TPPTPPLRHSATRFAT K V I L R H 4 1 0 2 0 0 0 0 0 1 2 0 0 0 8 3 5 0 1 4 0 0 31 0 3129.6598 A0A0U1RRM6 A0A0U1RRM6 303 333 yes yes 3 0.0072364 49.141 By MS/MS By MS/MS 1 1 15784000 8129100 7654500 7048 400 8050 17850;17851 17214;17215 17215 6948 2 VISGTTLGYLSPK EMEASRHKVISGTTLG TLGYLSPKDMNQPSSS K V I P K D 0 0 0 0 0 0 0 2 0 1 2 1 0 0 1 2 2 0 1 1 0 0 13 0 1334.7446 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 43 55 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 2 0.00092289 106.3 By MS/MS By MS/MS 1 1 30085000 13147000 16938000 7049 270 8051 17852;17853 17216;17217;17218 17216 478 3 VISGVLQLGNIVFKK EEQMGLLRVISGVLQL LGNIVFKKERNTDQAS R V I K K E 0 0 1 0 0 1 0 2 0 2 2 2 0 1 0 1 0 0 0 3 0 0 15 1 1613.9869 P35579 P35579 342 356 MYH9 Myosin-9 yes yes 3 2.5376E-05 116.9 By MS/MS By MS/MS 1 2 18320000 13739000 4580700 7050 1795 8052 17854;17855;17856 17219;17220 17219 2 VISHDRDSPPPPPPPPPPPQPQPSLK AIYGSVDRVISHDRDS PQPQPSLKRNPKHADG R V I L K R 0 1 0 2 0 2 0 0 1 1 1 1 0 0 13 3 0 0 0 1 0 0 26 1 2773.4551 Q69YN4 Q69YN4 131 156 KIAA1429 Protein virilizer homolog yes yes 3;4 4.7071E-07 114.75 By MS/MS By MS/MS 1 2 100830000 17559000 83275000 7051 2298 8053 17857;17858;17859 17221;17222;17223 17221 4627;4628 3 VISRPPPSVSPPK PSLRSPPRVISRPPPS PPSVSPPKCIQMERHV R V I P K C 0 1 0 0 0 0 0 0 0 1 0 1 0 0 5 3 0 0 0 2 0 0 13 1 1359.7874 Q8NHM5;A0A0C4DGG3 Q8NHM5 1022 1034 KDM2B Lysine-specific demethylase 2B yes no 3 0.0042871 70.167 By MS/MS By MS/MS 2 2 27355000 16684000 10670000 7052 2525 8054 17860;17861;17862;17863 17224;17225;17226 17226 5159;5160 2 VITEEMNGKEISPGSGPGEIR AEVGKDERVITEEMNG GSGPGEIRKVEPVTQK R V I I R K 0 1 1 0 0 0 4 4 0 3 0 1 1 0 2 2 1 0 0 1 0 0 21 1 2199.0841 O43491;E9PK52;E9PHY5;H0Y5B0;E9PMV8;Q6R5J7;E9PMG5 O43491 704 724 EPB41L2 Band 4.1-like protein 2 yes no 3 0.014532 49.655 By MS/MS By matching 1 1 14823000 9742100 5080500 7053 1502 8055 17864;17865 17227 17227 540 2802;2803 1 VITNQYNNPAGLYSSENISNFNNALESK PASSTTARVITNQYNN FNNALESKTAASGVEA R V I S K T 2 0 7 0 0 1 2 1 0 2 2 1 0 1 1 4 1 0 2 1 0 0 28 0 3100.4738 O00151 O00151 139 166 PDLIM1 PDZ and LIM domain protein 1 yes yes 3 4.4616E-10 98.133 By MS/MS By MS/MS 1 1 95746000 50682000 45064000 7054 1426 8056 17866;17867 17228;17229 17229 2619 2 VIYDFIEK LKDRETSKVIYDFIEK VIYDFIEKTGGVEAVK K V I E K T 0 0 0 1 0 0 1 0 0 2 0 1 0 1 0 0 0 0 1 1 0 0 8 0 1025.5433 O00401 O00401 254 261 WASL Neural Wiskott-Aldrich syndrome protein yes yes 2 0.0045954 131.03 By MS/MS By MS/MS 1 1 358720000 196820000 161890000 7055 1435 8057 17868;17869 17230;17231 17230 8176 2 VIYSQPSAR KKGTSSKKVIYSQPSA IYSQPSARSEGEFKQT K V I A R S 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 2 0 0 1 1 0 0 9 0 1019.54 A0A087WY82;Q9Y624 A0A087WY82 258 266 F11R Junctional adhesion molecule A yes no 2 3.5622E-07 109.48 By MS/MS By MS/MS 2 2 34863000 20425000 14438000 7056 119 8058 17870;17871;17872;17873 17232;17233;17234;17235 17235 208;7989 3 VIYSQPSARSEGEFK KKGTSSKKVIYSQPSA ARSEGEFKQTSSFLV_ K V I F K Q 1 1 0 0 0 1 2 1 0 1 0 1 0 1 1 3 0 0 1 1 0 0 15 1 1696.842 A0A087WY82;Q9Y624 A0A087WY82 258 272 F11R Junctional adhesion molecule A yes no 2 0.00031735 116.78 By MS/MS By MS/MS 2 3 72143000 25614000 46529000 7057 119 8059;8060 17874;17875;17876;17877;17878 17236;17237;17238;17239 17236 208;209;7989 3 VKAQTPPGPSLSGSKSPCPQEK GSISPYPKVKAQTPPG KSPCPQEKSKDSLVQS K V K E K S 1 0 0 0 1 2 1 2 0 0 1 3 0 0 5 4 1 0 0 1 0 0 22 2 2279.158 Q9UQ35 Q9UQ35 999 1020 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0011779 71.556 By MS/MS By MS/MS 1 1 49378000 25331000 24047000 7058 3074 8061 17879;17880 17240;17241 17241 6505;6506;6507;7921 2 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK NNDLEELKVKASPITN EYTFSPGKSKATPEKS K V K G K S 1 0 1 5 0 0 3 3 0 1 1 3 0 2 3 3 2 0 1 2 0 0 31 2 3356.5572 Q02880 Q02880 1397 1427 TOP2B DNA topoisomerase 2-beta yes yes 3;4 0.0016063 62.57 By MS/MS By MS/MS 3 4 246740000 59528000 187210000 7059 1989 8062;8063 17881;17882;17883;17884;17885;17886;17887 17242;17243;17244;17245;17246 17246 3813;3814;7516;7517;8316 5 VKEEPPSPPQSPR LSSSPLVRVKEEPPSP PSPPQSPRVEEASPGR R V K P R V 0 1 0 0 0 1 2 0 0 0 0 1 0 0 5 2 0 0 0 1 0 0 13 1 1446.7467 E9PMQ6;Q00613 E9PMQ6 297 309 HSF1 Heat shock factor protein 1 yes no 2 0.0093426 103.08 By MS/MS By MS/MS 1 1 36754000 19739000 17016000 7060 914 8064 17888;17889 17247;17248 17248 1700;1701 2 VKELTLSSNQITQLPNTTFR DAFQKLRRVKELTLSS QLPNTTFRPMPNLRSV R V K F R P 0 1 2 0 0 2 1 0 0 1 3 1 0 1 1 2 4 0 0 1 0 0 20 1 2289.2329 C9JPM9;C9JEE2;Q86UE6 C9JPM9 115 134 LRRTM1 Leucine-rich repeat transmembrane neuronal protein 1 yes no 2 0.028385 49.089 By MS/MS 1 0 0 0 7061 659 8065 17890 17249 17249 1223 1 VKESSIIAPAPAEDVDTPPR CRQVYEFRVKESSIIA EDVDTPPRKKKRKHRL R V K P R K 3 1 0 2 0 0 2 0 0 2 0 1 0 0 4 2 1 0 0 2 0 0 20 1 2091.0848 Q15910 Q15910 471 490 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 3 8.0061E-07 126.09 By MS/MS By MS/MS 1 1 68438000 36864000 31574000 7062 2159 8066 17891;17892 17250;17251 17250 7605 2 VKIVTVKTQAYQDQK ________________ TQAYQDQKPGTSGLRK M V K Q K P 1 0 0 1 0 3 0 0 0 1 0 3 0 0 0 0 2 0 1 3 0 0 15 2 1747.9832 P36871 P36871 2 16 PGM1 Phosphoglucomutase-1 yes yes 2 0.02133 51.727 By MS/MS By matching 1 1 4427100 2559100 1868000 7063 1803 8067 17893;17894 17252 17252 0 VKLDDDSDDDEESK LLPLEKNRVKLDDDSD SDDDEESKEGQESSSS R V K S K E 0 0 0 6 0 0 2 0 0 0 1 2 0 0 0 2 0 0 0 1 0 0 14 1 1608.6639 Q12872 Q12872 598 611 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 2 0.017896 73.593 By matching By MS/MS 1 1 22719000 12530000 10189000 7064 2029 8068 17895;17896 17253 17253 3945 1 VKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEK LLPLEKNRVKLDDDSD PCVVVEEKKPQLTQEE R V K E K K 4 0 2 6 1 1 6 1 0 0 1 3 0 0 3 6 1 0 0 5 0 0 40 2 4246.8819 Q12872 Q12872 598 637 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 4 0.00042752 56.1 By matching By MS/MS 1 1 122530000 64738000 57789000 7065 2029 8069 17897;17898 17254 17254 3945 1 VKLESPTVSTLTPSSPGK LKKTLLDRVKLESPTV LTPSSPGKLLTRSLAL R V K G K L 0 0 0 0 0 0 1 1 0 0 2 2 0 0 3 4 3 0 0 2 0 0 18 1 1826.9989 A0A087WTV6;A0A087WZR9;Q96C36 A0A087WTV6 216 233 PYCR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 yes no 2;3 9.6605E-05 124.45 By MS/MS By MS/MS 2 2 20009000 12585000 7423500 7066 46 8070 17899;17900;17901;17902 17255;17256;17257 17257 86;87 3 VKMPEQEYEFPEPR LEKAKNARVKMPEQEY EYEFPEPRNLNNNMRR R V K P R N 0 1 0 0 0 1 4 0 0 0 0 1 1 1 3 0 0 0 1 1 0 0 14 1 1777.8345 Q9H6X2 Q9H6X2 418 431 ANTXR1 Anthrax toxin receptor 1 yes yes 2 0.010577 62.088 By MS/MS By MS/MS 1 2 14239000 6332100 7906800 7067 2845 8071 17903;17904;17905 17258;17259 17258 1131 8462 2 VKPASPVAQPK SQGKTEVKVKPASPVA ASPVAQPKEEAKTETE K V K P K E 2 0 0 0 0 1 0 0 0 0 0 2 0 0 3 1 0 0 0 2 0 0 11 1 1120.6604 Q96EV2;H0Y3K4 Q96EV2 761 771 RBM33 RNA-binding protein 33 yes no 2 0.0039612 89.46 By MS/MS By matching 1 1 62116000 38624000 23493000 7068 2644 8072 17906;17907 17260 17260 5456 1 VKPETPPRQSHSGSISPYPK GSSSPDTKVKPETPPR GSISPYPKVKAQTPPG K V K P K V 0 1 0 0 0 1 1 1 1 1 0 2 0 0 5 4 1 0 1 1 0 0 20 2 2191.1386 Q9UQ35;I3L4D8 Q9UQ35 979 998 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0031625 67.449 By MS/MS By MS/MS 1 1 118490000 70506000 47986000 7069 3074 8073 17908;17909 17261;17262 17262 6545;6546;6547;6548;7938 2 VKSPVSLTAHSLIGASPK MNTNQESKVKSPVSLT SLIGASPKQTNLTKAQ K V K P K Q 2 0 0 0 0 0 0 1 1 1 2 2 0 0 2 4 1 0 0 2 0 0 18 1 1791.0254 P28749 P28749 747 764 RBL1 Retinoblastoma-like protein 1 yes yes 3 0.017798 51.554 By MS/MS By matching 1 1 13781000 7981600 5799300 7070 1772 8074 17910;17911 17263 17263 3339 1 VLAETPDSFEK EVAESPLRVLAETPDS ETPDSFEKHIRSILQR R V L E K H 1 0 0 1 0 0 2 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 11 0 1234.6081 Q99567;J3KMX1 Q99567 521 531 NUP88 Nuclear pore complex protein Nup88 yes no 2 0.00089805 113.95 By MS/MS By MS/MS 1 1 25839000 13898000 11940000 7071 2725 8075 17912;17913 17264;17265 17264 7818 2 VLAGETLSVNDPPDVLDR VVREEMEKVLAGETLS DPPDVLDRQKCLAALA K V L D R Q 1 1 1 3 0 0 1 1 0 0 3 0 0 0 2 1 1 0 0 3 0 0 18 0 1908.9793 Q12906;K7EQR9;K7EKJ9 Q12906 183 200 ILF3 Interleukin enhancer-binding factor 3 yes no 2;3 1.5116E-09 117.48 By matching By MS/MS 2 2 44907000 22023000 22885000 7072 2033 8076 17914;17915;17916;17917 17266;17267 17267 1 VLAPASTLQSSYQIPTENSMTAR QNVTVTERVLAPASTL TENSMTARNTTVSGAG R V L A R N 3 1 1 0 0 2 1 0 0 1 2 0 1 0 2 4 3 0 1 1 0 0 23 0 2464.2268 Q14126 Q14126 1050 1072 DSG2 Desmoglein-2 yes yes 2;3 3.5899E-05 91.964 By MS/MS By MS/MS 3 3 87944000 42507000 45438000 7073 2083 8077;8078 17918;17919;17920;17921;17922;17923 17268;17269;17270;17271 17270 831 4109;8335 4 VLAPILPDNFSTPTGSR PDSPWRERVLAPILPD FSTPTGSRTDSQSVRH R V L S R T 1 1 1 1 0 0 0 1 0 1 2 0 0 1 3 2 2 0 0 1 0 0 17 0 1783.9468 Q9NQS7 Q9NQS7 281 297 INCENP Inner centromere protein yes yes 2;3 0.00020667 116.74 By MS/MS By MS/MS 1 2 40637000 21295000 19343000 7074 2898 8079 17924;17925;17926 17272;17273;17274 17273 6108 3 VLATVTKPVGGDK VEKKKKEKVLATVTKP TKPVGGDKNGGTRVVK K V L D K N 1 0 0 1 0 0 0 2 0 0 1 2 0 0 1 0 2 0 0 3 0 0 13 1 1283.7449 Q02878;F8VZA3;F8VWR1;F8VU16;F8VZ45;U3KQR5 Q02878 88 100 RPL6 60S ribosomal protein L6 yes no 3 2.6457E-06 107.09 By MS/MS By MS/MS 1 1 11474000 6010700 5463100 7075 1988 8080 17927;17928 17275;17276 17275 1 VLDDVSIRSPETK NKLYPKDRVLDDVSIR SIRSPETKCPKQNSIE R V L T K C 0 1 0 2 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 2 0 0 13 1 1457.7726 E7ETD6;Q12830;F5GXF5 E7ETD6 1153 1165 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2;3 3.9469E-11 147.83 By MS/MS By MS/MS 1 2 37346000 12959000 24387000 7076 819 8081 17929;17930;17931 17277;17278;17279;17280 17279 1488 4 VLDEEGSER FEDDGSEKVLDEEGSE LDEEGSEREFDEDSDE K V L E R E 0 1 0 1 0 0 3 1 0 0 1 0 0 0 0 1 0 0 0 1 0 0 9 0 1032.4724 O43719 O43719 610 618 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.00056075 149.33 By MS/MS By MS/MS 1 1 305590000 156010000 149580000 7077 1505 8082 17932;17933 17281;17282;17283;17284;17285;17286 17281 2827 6 VLDQSPTVMFSSFK VNIPGPEKVLDQSPTV TVMFSSFKNVKSVETL K V L F K N 0 0 0 1 0 1 0 0 0 0 1 1 1 2 1 3 1 0 0 2 0 0 14 0 1584.7858 Q5THK1 Q5THK1 941 954 PRR14L Protein PRR14L yes yes 2 0.0060011 65.374 By MS/MS 1 3509000 3509000 0 7078 2258 8083 17934 17287 17287 901 4515 1 VLDSSYGITK SEKELNFRVLDSSYGI DSSYGITKSLENIYSE R V L T K S 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 2 1 0 1 1 0 0 10 0 1081.5655 Q68D51 Q68D51 180 189 DENND2C DENN domain-containing protein 2C yes yes 2 0.0006364 113.66 By MS/MS By MS/MS 1 1 15708000 10165000 5543000 7079 2292 8084 17935;17936 17288;17289;17290 17290 4614 3 VLDTSSLTQSAPASPTNK TVNARPQRVLDTSSLT APASPTNKGVHIHQAG R V L N K G 2 0 1 1 0 1 0 0 0 0 2 1 0 0 2 4 3 0 0 1 0 0 18 0 1815.9214 Q8N122;I3L436 Q8N122 850 867 RPTOR Regulatory-associated protein of mTOR yes no 2 5.0697E-237 281.65 By MS/MS By MS/MS 2 2 225310000 105970000 119340000 7080 2456 8085;8086 17937;17938;17939;17940 17291;17292;17293;17294;17295 17292 5017;5018;5019 5 VLEDDPEAAYTTR VSDFGLSRVLEDDPEA PEAAYTTRGGKIPIRW R V L T R G 2 1 0 2 0 0 2 0 0 0 1 0 0 0 1 0 2 0 1 1 0 0 13 0 1478.6889 C9JXA2;P29320;F8W9W0;F8VP57;B7ZKW7;B7ZKJ3;P54756;E9PG71;P54764 E9PG71 770 782 EPHA3;EPHA5;EPHA4 Receptor protein-tyrosine kinase;Ephrin type-A receptor 3;Ephrin type-A receptor 5;Ephrin type-A receptor 4 no no 2;3 8.7141E-27 180.19 By MS/MS By MS/MS 2 2 241900000 117430000 124470000 7081 699;870 8087 17941;17942;17943;17944 17296;17297;17298 17296 8099 2 VLEDDPEATYTTSGGK VSDFGLSRVLEDDPEA TYTTSGGKIPIRWTAP R V L G K I 1 0 0 2 0 0 2 2 0 0 1 1 0 0 1 1 3 0 1 1 0 0 16 0 1681.7683 P29317 P29317 763 778 EPHA2 Ephrin type-A receptor 2 yes yes 2 3.4795E-15 145.31 By MS/MS By matching 1 1 30788000 17656000 13133000 7082 1773 8088 17945;17946 17299 17299 7420;8250 1 VLEDDPEATYTTSGGKIPIR VSDFGLSRVLEDDPEA SGGKIPIRWTAPEAIS R V L I R W 1 1 0 2 0 0 2 2 0 2 1 1 0 0 2 1 3 0 1 1 0 0 20 1 2161.0903 P29317 P29317 763 782 EPHA2 Ephrin type-A receptor 2 yes yes 3 0.00018544 93.427 By MS/MS By MS/MS 1 1 24823000 14075000 10748000 7083 1773 8089 17947;17948 17300;17301;17302;17303 17301 7420;8250 4 VLEDEEGSKDIELSDDPYDCIR NTRIPRVRVLEDEEGS DDPYDCIRLSVENVPC R V L I R L 0 1 0 5 1 0 4 1 0 2 2 1 0 0 1 2 0 0 1 1 0 0 22 1 2596.1487 Q15024 Q15024 170 191 EXOSC7 Exosome complex component RRP42 yes yes 3 1.95E-05 119.27 By MS/MS By matching 1 1 44077000 18343000 25733000 7084 2119 8090 17949;17950 17304 17304 4187 1 VLEGMEVVR GKHVVFGKVLEGMEVV LEGMEVVRKVESTKTD K V L V R K 0 1 0 0 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 3 0 0 9 0 1030.5481 P23284 P23284 172 180 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 2 0.0094417 93.162 By MS/MS 1 2245000 2245000 0 7085 1754 8091 17951 17305 17305 1 VLEILYEFPR GRIETDTKVLEILYEF EILYEFPRVFSSVMKP K V L P R V 0 1 0 0 0 0 2 0 0 1 2 0 0 1 1 0 0 0 1 1 0 0 10 0 1277.702 A0A087X0M0;Q7Z5L2 A0A087X0M0 213 222 R3HCC1L Coiled-coil domain-containing protein R3HCC1L yes no 2 5.6795E-07 158.76 By MS/MS By MS/MS 1 1 18450000 11871000 6579600 7086 157 8092 17952;17953 17306;17307 17306 7999 2 VLEQLTGQTPVFSK DRLTRAAKVLEQLTGQ GQTPVFSKARYTVRSF K V L S K A 0 0 0 0 0 2 1 1 0 0 2 1 0 1 1 1 2 0 0 2 0 0 14 0 1545.8403 P62913;Q5VVC8;Q5VVC9 P62913 39 52 RPL11 60S ribosomal protein L11 yes no 2 0.002752 103.88 By MS/MS By matching 1 1 10720000 5622900 5097000 7087 1949 8093 17954;17955 17308 17308 1 VLEYEMTQFDR QSNSSQPKVLEYEMTQ YEMTQFDRRGPIAKSG K V L D R R 0 1 0 1 0 1 2 0 0 0 1 0 1 1 0 0 1 0 1 1 0 0 11 0 1429.6548 Q9ULJ7 Q9ULJ7 1296 1306 ANKRD50 Ankyrin repeat domain-containing protein 50 yes yes 2 0.00079946 96.342 By MS/MS By MS/MS 1 1 7021700 4206800 2814900 7088 3044 8094 17956;17957 17309;17310 17309 1208 8502 1 VLFRPSDTANSSNQDALSSNTSLK YVFNHRGRVLFRPSDT LSSNTSLKLRKLESLR R V L L K L 2 1 3 2 0 1 0 0 0 0 3 1 0 1 1 6 2 0 0 1 0 0 24 1 2551.2514 Q8N4V1 Q8N4V1 99 122 MMGT1 Membrane magnesium transporter 1 yes yes 3 0.0013237 65.534 By MS/MS By matching 1 1 19923000 11857000 8066000 7089 2472 8095 17958;17959 17311 17311 5056 1 VLGLVLLR QPEREEKRVLGLVLLR VLGLVLLRGENLVSMT R V L L R G 0 1 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 2 0 0 8 0 881.60622 J3QLE5;P63162;P14678 J3QLE5 66 73 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated proteins B and B yes no 2 1.8255E-28 166.13 By MS/MS 1 0 0 0 7090 1349 8096 17960 17312 17312 1 VLGPYTFSICDTSNFSDYIRGGIVSQVK GNQPMEIKVLGPYTFS GGIVSQVKVPKKISFK K V L V K V 0 1 1 2 1 1 0 3 0 3 1 1 0 2 1 4 2 0 2 3 0 0 28 1 3122.5383 P22314 P22314 269 296 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes yes 3 0.0039898 51.938 By MS/MS By MS/MS 1 1 803090000 369900000 433190000 7091 1747 8097 17961;17962 17313;17314;17315 17315 3292;3293;3294;7410 3 VLGRSPLTILQDDNSPGTLTLR RWKPNSSKVLGRSPLT SPGTLTLRQGKRPSPL K V L L R Q 0 2 1 2 0 1 0 2 0 1 5 0 0 0 2 2 3 0 0 1 0 0 22 1 2365.2965 Q99618;J3KMY0 Q99618 195 216 CDCA3 Cell division cycle-associated protein 3 yes no 3 0.0033599 59.536 By MS/MS 1 6426100 0 6426100 7092 2728 8098 17963 17316 17316 5666;5667 1 VLGSEGEEEDEALSPAK RPGRKAARVLGSEGEE DEALSPAKGQKPALDC R V L A K G 2 0 0 1 0 0 5 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 17 0 1758.816 M0R0Q7;P18858;B4E135;M0QY71;M0R1G7;F5GZ28 M0R0Q7 63 79 LIG1 DNA ligase;DNA ligase 1 yes no 2 6.8104E-64 196.65 By MS/MS By MS/MS 3 3 713400000 355620000 357780000 7093 1420 8099;8100 17964;17965;17966;17967;17968;17969 17317;17318;17319;17320;17321;17322;17323;17324;17325 17317 2606;2607 9 VLGSSTSATNSTSVSSRK VAARAPRKVLGSSTSA STSVSSRKGYKMFT__ K V L R K G 1 1 1 0 0 0 0 1 0 0 1 1 0 0 0 7 3 0 0 2 0 0 18 1 1767.8963 A0A0U1RQC1;H0YMA4;A0A0U1RQM0;Q15004 A0A0U1RQC1 25 42 KIAA0101 PCNA-associated factor yes no 2 0.017905 58.172 By MS/MS 1 2338100 0 2338100 7094 378 8101 17970 17326 17326 694;695;696 0 VLHSSNPVPLYAPNLSPPADSR LIVEVFNKVLHSSNPV LSPPADSRIHVPASGY K V L S R I 2 1 2 1 0 0 0 0 1 0 3 0 0 0 5 4 0 0 1 2 0 0 22 0 2330.2019 H0YM74;Q92610 H0YM74 558 579 ZNF592 Zinc finger protein 592 yes no 3 0.00016944 79.395 By MS/MS By MS/MS 1 1 16513000 8596000 7917100 7095 1216 8102 17971;17972 17327;17328;17329;17330 17327 2274 4 VLIEDTDDEANT QSKARDTKVLIEDTDD DTDDEANT________ K V L N T - 1 0 1 3 0 0 2 0 0 1 1 0 0 0 0 0 2 0 0 1 0 0 12 0 1333.5885 Q9UBH6 Q9UBH6 685 696 XPR1 Xenotropic and polytropic retrovirus receptor 1 yes yes 2 0.031493 70.816 By matching By MS/MS 1 1 20322000 10685000 9637800 7096 2990 8103 17973;17974 17331 17331 1 VLITTDLLAR EFRSGSSRVLITTDLL ITTDLLARGIDVQQVS R V L A R G 1 1 0 1 0 0 0 0 0 1 3 0 0 0 0 0 2 0 0 1 0 0 10 0 1113.6758 P60842;E7EQG2;Q14240 P60842 325 334 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 0.0027507 110.41 By MS/MS By MS/MS 1 1 10471000 5822600 4648300 7097 1929 8104 17975;17976 17332;17333 17333 2 VLKEPVNLEGDDTSLIHGK SVTYKRGRVLKEPVNL DTSLIHGKIPSEMPSP R V L G K I 0 0 1 2 0 0 2 2 1 1 3 2 0 0 1 1 1 0 0 2 0 0 19 1 2063.0899 Q9H2J7 Q9H2J7 662 680 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 3 4.3691E-44 174.76 By MS/MS By MS/MS 1 1 56704000 31144000 25560000 7098 2819 8105 17977;17978 17334;17335 17335 5907;7850 2 VLLESEQFLTELTR ________________ QFLTELTRLFQKCRTS M V L T R L 0 1 0 0 0 1 3 0 0 0 4 0 0 1 0 1 2 0 0 1 0 0 14 0 1676.8985 H0YLA2;P37108 H0YLA2 2 15 SRP14 Signal recognition particle 14 kDa protein yes no 2 0.00056954 116.74 By matching By MS/MS 1 1 4986400 2941200 2045300 7099 1209 8106 17979;17980 17336 17336 1 VLLGFSSDESDVEASPR AAPAAGSKVLLGFSSD SDVEASPRDQAGGGGR K V L P R D 1 1 0 2 0 0 2 1 0 0 2 0 0 1 1 4 0 0 0 2 0 0 17 0 1806.8636 Q9Y2U8 Q9Y2U8 135 151 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 0.00087728 93.623 By MS/MS 1 8585500 8585500 0 7100 3095 8107 17981 17337 17337 6644 1 VLLQASQDENFGNTTPR RKQSAQKRVLLQASQD NFGNTTPRNQVIPRTP R V L P R N 1 1 2 1 0 2 1 1 0 0 2 0 0 1 1 1 2 0 0 1 0 0 17 0 1888.9279 G3V1T4;P57740 G3V1T4 32 48 NUP107 Nuclear pore complex protein Nup107 yes no 2 0.00035049 97.214 By MS/MS 1 8425800 0 8425800 7101 1066 8108 17982 17338;17339 17338 2014 2 VLLSPSIPSVGQDQTLSPGSK KPAGQQPRVLLSPSIP QTLSPGSKQESPPAAA R V L S K Q 0 0 0 1 0 2 0 2 0 1 3 1 0 0 3 5 1 0 0 2 0 0 21 0 2109.1317 Q13625 Q13625 553 573 TP53BP2 Apoptosis-stimulating of p53 protein 2 yes yes 2;3 0.00044313 87.654 By MS/MS By MS/MS 2 2 84955000 39536000 45418000 7102 2073 8109 17983;17984;17985;17986 17340;17341;17342 17340 4092;4093 3 VLNDSLTPEIEADR AASTDSLRVLNDSLTP TPEIEADRSGGRTDAE R V L D R S 1 1 1 2 0 0 2 0 0 1 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1570.7839 A0A087WZP2;Q9UI36;A0A087WY66;A0A087WZA7 A0A087WZP2 721 734 DACH1 Dachshund homolog 1 yes no 2 0.0041683 88.637 By MS/MS By matching 1 1 11295000 7028600 4266300 7103 143 8110 17987;17988 17343 17343 6864 1 VLNTGSDVEEAVADALK SSSVSAMRVLNTGSDV EAVADALKKPARRRYE R V L L K K 3 0 1 2 0 0 2 1 0 0 2 1 0 0 0 1 1 0 0 3 0 0 17 0 1729.8734 E3W994;J3KR49;O75122 E3W994 570 586 CLASP2 CLIP-associating protein 2 yes no 2 1.3694E-77 208.4 By MS/MS By matching 1 1 127710000 70363000 57346000 7104 774 8111 17989;17990 17344 17344 1389;7057 1 VLNTGSDVEEAVADALKKPAR SSSVSAMRVLNTGSDV DALKKPARRRYESYGM R V L A R R 4 1 1 2 0 0 2 1 0 0 2 2 0 0 1 1 1 0 0 3 0 0 21 2 2182.1594 E3W994;J3KR49;O75122 E3W994 570 590 CLASP2 CLIP-associating protein 2 yes no 3;4 5.527E-05 110.37 By MS/MS By MS/MS 1 2 54245000 22983000 31262000 7105 774 8112 17991;17992;17993 17345;17346;17347;17348 17345 1389;7057 4 VLPGVDALSNI SLELLEGKVLPGVDAL GVDALSNI________ K V L N I - 1 0 1 1 0 0 0 1 0 1 2 0 0 0 1 1 0 0 0 2 0 0 11 0 1096.6128 P00558 P00558 407 417 PGK1 Phosphoglycerate kinase 1 yes yes 2 0.0045368 95.815 By MS/MS 1 3608900 0 3608900 7106 1626 8113 17994 17349 17349 1 VLPITVPKSPAFALK VVGVPEKKVLPITVPK KSPAFALKNRIRMPTK K V L L K N 2 0 0 0 0 0 0 0 0 1 2 2 0 1 3 1 1 0 0 2 0 0 15 1 1579.9702 Q9ULW0 Q9ULW0 478 492 TPX2 Targeting protein for Xklp2 yes yes 2;3 0.00018724 107.5 By MS/MS By MS/MS 2 2 52702000 29207000 23495000 7107 3049 8114 17995;17996;17997;17998 17350;17351;17352;17353;17354 17351 6435 5 VLPPEVADGGVVDSGVYAVPPPAER LYDVPRERVLPPEVAD AVPPPAEREAPAEGKR R V L E R E 3 1 0 2 0 0 2 3 0 0 1 0 0 0 5 1 0 0 1 6 0 0 25 0 2489.2802 P56945 P56945 394 418 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes yes 3 0.0011771 63.536 By matching By MS/MS 1 1 15405000 7711400 7693700 7108 1919 8115 17999;18000 17355 17355 8309 1 VLPPPAGYVPIRTPAR AMFPEGYKVLPPPAGY VPIRTPARKLTATPTP K V L A R K 2 2 0 0 0 0 0 1 0 1 1 0 0 0 5 0 1 0 1 2 0 0 16 1 1702.9883 O75533 O75533 414 429 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.023538 56.482 By MS/MS 1 0 0 0 7109 1549 8116 18001 17356 17356 1 VLQALEGLK GSKSVARRVLQALEGL LQALEGLKMVEKDQDG R V L L K M 1 0 0 0 0 1 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 0 9 0 969.58588 A0A075B6E2;P39019 A0A075B6E2 29 37 RPS19 40S ribosomal protein S19 yes no 2 0.0060682 110.31 By MS/MS By MS/MS 1 1 3188000 3188000 0 7110 7 8117 18002;18003 17357;17358 17357 2 VLQDSLSMHSSDSPSR ELCATIDKVLQDSLSM HSSDSPSRSPKTLLGS K V L S R S 0 1 0 2 0 1 0 0 1 0 2 0 1 0 1 6 0 0 0 1 0 0 16 0 1744.805 Q5VWP3 Q5VWP3 271 286 MLIP Muscular LMNA-interacting protein yes yes 2 0.023541 55.546 By MS/MS 1 0 0 0 7111 2276 8118 18004 17359 17359 913 4567;4568;4569 1 VLQEASSPVPQETNSNTDNKPYK SHLHKLKKVLQEASSP NTDNKPYKCSICNVAY K V L Y K C 1 0 3 1 0 2 2 0 0 0 1 2 0 0 3 3 2 0 1 2 0 0 23 1 2545.2296 E7EVZ1;Q86UP3 E7EVZ1 1546 1568 ZFHX4 Zinc finger homeobox protein 4 yes no 3 0.011052 50.237 By MS/MS 1 7274400 7274400 0 7112 831 8119 18005 17360 17360 1551;1552 1 VLQKLNSILTQPWR EGMDTFIRVLQKLNSI SILTQPWRLHVNMGTT R V L W R L 0 1 1 0 0 2 0 0 0 1 3 1 0 0 1 1 1 1 0 1 0 0 14 1 1694.9832 Q69YN4;H0YBN5 Q69YN4 975 988 KIAA1429 Protein virilizer homolog yes no 3 0.029337 43.382 By MS/MS 1 9012200 9012200 0 7113 2298 8120 18006 17361 17361 0 VLSDSEDEEKDADVPGTSTR LYNSMKKKVLSDSEDE DVPGTSTRKRKDHQPR K V L T R K 1 1 0 4 0 0 3 1 0 0 1 1 0 0 1 3 2 0 0 2 0 0 20 1 2148.9659 Q8WWQ0 Q8WWQ0 1279 1298 PHIP PH-interacting protein yes yes 2;3 0.00076317 87.228 By MS/MS By matching 2 2 104750000 58403000 46348000 7114 2565 8121 18007;18008;18009;18010 17362;17363 17362 5255;5256 2 VLSHSSKIIIVNR DFRLSYGRVLSHSSKI SKIIIVNRNREEMLLN R V L N R N 0 1 1 0 0 0 0 0 1 3 1 1 0 0 0 3 0 0 0 2 0 0 13 1 1464.8776 M0QZX5;M0R026;A1L0T0 M0QZX5 146 158 ILVBL Acetolactate synthase-like protein yes no 3 0.016324 62.338 By MS/MS 1 0 0 0 7115 442 8122 18011 17364 17364 825 1 VLSPEELEDR EGSTKRKRVLSPEELE SPEELEDRQKKRQEAA R V L D R Q 0 1 0 1 0 0 3 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 10 0 1185.5877 A0A0A0MRH8;A0A0A0MSH9;Q86WJ1 A0A0A0MRH8 353 362 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes no 2 0.010163 91.123 By MS/MS By MS/MS 1 1 7402300 3847100 3555200 7116 215 8123 18012;18013 17365;17366 17365 376 1 VLSPLIIK PKRLPDGRVLSPLIIK VLSPLIIKSTPRNLNR R V L I K S 0 0 0 0 0 0 0 0 0 2 2 1 0 0 1 1 0 0 0 1 0 0 8 0 881.59499 Q8NCN4 Q8NCN4 401 408 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 2 0.0088771 99.013 By MS/MS By MS/MS 1 1 11945000 7486400 4458300 7117 2503 8124 18014;18015 17367;17368 17367 5112 2 VLSPLRSPPLIGSESAYESFLSADDK DSESPIEKVLSPLRSP SFLSADDKASGRGAES K V L D K A 2 1 0 2 0 0 2 1 0 1 4 1 0 1 3 6 0 0 1 1 0 0 26 1 2777.4123 P46821 P46821 1394 1419 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 4.1134E-32 131.5 By MS/MS By MS/MS 2 3 101700000 57968000 43736000 7118 1840 8125;8126 18016;18017;18018;18019;18020 17369;17370;17371;17372;17373;17374 17373 3506;3507;3521;8274 5 VLSPPHIK SSSATKQKVLSPPHIK VLSPPHIKADFNLADF K V L I K A 0 0 0 0 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 1 0 0 8 0 889.53854 A0A0D9SG79;Q9NZ09 A0A0D9SG79 170 177 UBAP1 Ubiquitin-associated protein 1 yes no 2 0.012312 83.647 By MS/MS By MS/MS 1 1 24398000 14132000 10266000 7119 347 8127 18021;18022 17375;17376 17376 619 2 VLSPPKLNEVSSDANR FGQNMSERVLSPPKLN EVSSDANRENAAAESG R V L N R E 1 1 2 1 0 0 1 0 0 0 2 1 0 0 2 3 0 0 0 2 0 0 16 1 1724.9057 B7Z7F3;Q9H6Z4;K7ESQ0 B7Z7F3 258 273 RANBP3 Ran-binding protein 3 yes no 2;3 8.0586E-08 134.81 By MS/MS By MS/MS 2 2 271460000 154090000 117370000 7120 591 8128 18023;18024;18025;18026 17377;17378;17379;17380;17381;17382 17379 1078 6 VLSPTAAKPSPFEGK IKIKKKKKVLSPTAAK KPSPFEGKTSTEPSTA K V L G K T 2 0 0 0 0 0 1 1 0 0 1 2 0 1 3 2 1 0 0 1 0 0 15 1 1527.8297 Q96QC0 Q96QC0 311 325 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 2 0.0036472 87.669 By MS/MS By MS/MS 1 1 186840000 114190000 72650000 7121 2701 8129 18027;18028 17383;17384;17385 17384 5572 3 VLTANSNPSSPSAAK KRSRVTDKVLTANSNP PSSPSAAKRRRT____ K V L A K R 3 0 2 0 0 0 0 0 0 0 1 1 0 0 2 4 1 0 0 1 0 0 15 0 1442.7365 Q9NV56 Q9NV56 186 200 MRGBP MRG/MORF4L-binding protein yes yes 2 3.4382E-27 171.15 By MS/MS By MS/MS 1 1 30794000 17393000 13401000 7122 2922 8130 18029;18030 17386;17387 17387 6173 2 VLTIFSASNYYEVGSNR YEFCHNRKVLTIFSAS YYEVGSNRGAYVKLGP K V L N R G 1 1 2 0 0 0 1 1 0 1 1 0 0 1 0 3 1 0 2 2 0 0 17 0 1918.9425 O14830 O14830 503 519 PPEF2 Serine/threonine-protein phosphatase with EF-hands 2 yes yes 2 0.017322 52.463 By MS/MS By MS/MS 1 2 39266000 17416000 21851000 7123 1459 8131 18031;18032;18033 17388;17389 17388 2715;2716;8190 1 VLTLSDDLER DEISDHAKVLTLSDDL TLSDDLERTIEERVNI K V L E R T 0 1 0 2 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 10 0 1159.6085 P55010 P55010 225 234 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.028048 75.788 By matching By MS/MS 1 1 15973000 9254800 6718100 7124 1905 8132 18034;18035 17390 17390 3685 0 VLTPELYAELR AHNNHMAKVLTPELYA PELYAELRAKSTPSGF K V L L R A 1 1 0 0 0 0 2 0 0 0 3 0 0 0 1 0 1 0 1 1 0 0 11 0 1302.7184 P12277;G3V4N7;G3V461 P12277 33 43 CKB Creatine kinase B-type yes no 2 2.3147E-05 127.52 By MS/MS By MS/MS 2 2 29682000 15543000 14139000 7125 1687 8133 18036;18037;18038;18039 17391;17392;17393 17393 7396;8227 3 VLTPPQAAGDGILATTANQR GSPPNATRVLTPPQAA LATTANQRFSSPAPSS R V L Q R F 4 1 1 1 0 2 0 2 0 1 2 0 0 0 2 0 3 0 0 1 0 0 20 0 1993.0593 C9J9G2;Q96QT6;K7EPF7 C9J9G2 669 688 PHF12 PHD finger protein 12 yes no 3 0.0025997 65.023 By MS/MS By MS/MS 1 1 11344000 7491900 3851800 7126 646 8134 18040;18041 17394;17395;17396 17395 7022 3 VLVDSLVEDDR LSNSGYLKVLVDSLVE DSLVEDDRTLQSLLTP K V L D R T 0 1 0 3 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 3 0 0 11 0 1258.6405 Q92621;U3KPX2 Q92621 1524 1534 NUP205 Nuclear pore complex protein Nup205 yes no 2 0.0014206 110.53 By MS/MS By MS/MS 1 1 2332600 2332600 0 7127 2590 8135 18042;18043 17397;17398 17397 2 VLYYMEK SQQDDSMRVLYYMEKE RVLYYMEKELANFDPS R V L E K E 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 2 1 0 0 7 0 944.46774 S4R3V8;Q86X29 S4R3V8 356 362 LSR Lipolysis-stimulated lipoprotein receptor yes no 1;2 0.0077719 58.782 By MS/MS By MS/MS 2 2 19968000 10047000 9920800 7128 2416 8136;8137 18044;18045;18046;18047 17399;17400;17401 17400 8387;8388 1 VMDMIRAQEQKR TCLPENRKVMDMIRAQ IRAQEQKRDLHDQFQH K V M K R D 1 2 0 1 0 2 1 0 0 1 0 1 2 0 0 0 0 0 0 1 0 0 12 2 1503.765 A0A0G2JS92;B7Z879;A0A087WXL6;Q9H270 A0A0G2JS92 323 334 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes no 2 0.026516 58.592 By MS/MS 1 0 0 0 7129 108 8138 18048 17402 17402 40 1 VMEGTVAAQDEFYR CTRLIKPKVMEGTVAA AAQDEFYRSGWALNMK K V M Y R S 2 1 0 1 0 1 2 1 0 0 0 0 1 1 0 0 1 0 1 2 0 0 14 0 1614.7348 P41240 P41240 172 185 CSK Tyrosine-protein kinase CSK yes yes 2 0.00077925 87.667 By MS/MS By MS/MS 1 1 32992000 18336000 14656000 7130 1821 8139 18049;18050 17403;17404 17403 689 8262 2 VMLGETNPADSKPGTIR LNVVKTGRVMLGETNP DSKPGTIRGDFCIQVG R V M I R G 1 1 1 1 0 0 1 2 0 1 1 1 1 0 2 1 2 0 0 1 0 0 17 1 1784.9091 Q32Q12;P22392;E7ERL0;J3KPD9;O60361;P15531 Q32Q12 114 130 NME1-NME2;NME2;NME1;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase A yes no 3 0.0033424 66.76 By MS/MS By MS/MS 2 2 28298000 11371000 16927000 7131 1748 8140;8141 18051;18052;18053;18054 17405;17406;17407 17406 656 7411 2 VMLYPSRI KAIGHRIRVMLYPSRI VMLYPSRI________ R V M R I - 0 1 0 0 0 0 0 0 0 1 1 0 1 0 1 1 0 0 1 1 0 0 8 1 977.53682 P18077 P18077 103 110 RPL35A 60S ribosomal protein L35a yes yes 2 0.016186 70.912 By matching By MS/MS 1 1 6353500 2733900 3619600 7132 1722 8142 18055;18056 17408 17408 1 VMTIPYQPMPASSPVICAGGQDR LSQSPQGRVMTIPYQP ICAGGQDRCSDAAGYP R V M D R C 2 1 0 1 1 2 0 2 0 2 0 0 2 0 4 2 1 0 1 2 0 0 23 0 2474.1756 Q15365 Q15365 178 200 PCBP1 Poly(rC)-binding protein 1 yes yes 2;3 1.4227E-12 140.63 By MS/MS By MS/MS 6 6 536220000 267360000 268860000 7133 2133 8143;8144;8145 18057;18058;18059;18060;18061;18062;18063;18064;18065;18066;18067;18068 17409;17410;17411;17412;17413;17414;17415;17416;17417;17418;17419;17420;17421 17418 855;856 4225;4226 12 VMTPMMNPLIYSLR KLIFIFYRVMTPMMNP NPLIYSLRNKDVKEAV R V M L R N 0 1 1 0 0 0 0 0 0 1 2 0 3 0 2 1 1 0 1 1 0 0 14 0 1664.8452 Q8NGS8 Q8NGS8 286 299 OR13C5 Olfactory receptor 13C5 yes yes 2 0.031984 47.666 By MS/MS 1 0 0 0 7134 2523 8146 18069 17422 17422 1016 1 VMVYSALR CRRQEDSRVMVYSALR VMVYSALRIPPED___ R V M L R I 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 2 0 0 8 0 937.50552 Q96BI3 Q96BI3 253 260 APH1A Gamma-secretase subunit APH-1A yes yes 2 0.0065532 84.916 By MS/MS By MS/MS 2 2 29876000 14202000 15674000 7135 2626 8147;8148 18070;18071;18072;18073 17423;17424 17424 1053 5403;8417 1 VNDAEPGSPEAPQGK RRPRRRRRVNDAEPGS SPEAPQGKRRKADGED R V N G K R 2 0 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 15 0 1494.6951 Q8N8A6 Q8N8A6 76 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 2 0.00047834 109.39 By MS/MS By MS/MS 1 1 168600000 89786000 78819000 7136 2485 8149 18074;18075 17425;17426 17426 5074 2 VNFAMNVGK WAEDVDLRVNFAMNVG NFAMNVGKARGFFKKG R V N G K A 1 0 2 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 2 0 0 9 0 978.49569 P14618;B4DNK4;H3BR70 P14618 490 498 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 2 0.0098139 101.33 By MS/MS By MS/MS 1 1 8308800 3275000 5033900 7137 1700 8150 18076;18077 17427;17428 17427 2 VNFCPLPSEQCYQAPGGPEDR AALQPHPRVNFCPLPS APGGPEDRGPAWVGSH R V N D R G 1 1 1 1 2 2 2 2 0 0 1 0 0 1 4 1 0 0 1 1 0 0 21 0 2420.0525 Q15654 Q15654 44 64 TRIP6 Thyroid receptor-interacting protein 6 yes yes 2;3 0.00012131 88 By MS/MS By MS/MS 2 2 57053000 34832000 22221000 7138 2149 8151 18078;18079;18080;18081 17429;17430;17431 17429 4268;8356 3 VNFPENGFLSPDKLSLLEK GRLIIEFKVNFPENGF DKLSLLEKLLPERKEV K V N E K L 0 0 2 1 0 0 2 1 0 0 4 2 0 2 2 2 0 0 0 1 0 0 19 1 2146.131 P31689 P31689 326 344 DNAJA1 DnaJ homolog subfamily A member 1 yes yes 2;3 2.245E-06 131.35 By MS/MS By MS/MS 2 2 32521000 23827000 8693800 7139 1784 8152 18082;18083;18084;18085 17432;17433;17434 17433 3368;3369 3 VNFTVDQIR ________________ NFTVDQIRAIMDKKAN M V N I R A 0 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 2 0 0 9 0 1090.5771 P13639 P13639 2 10 EEF2 Elongation factor 2 yes yes 2 0.0054363 141.52 By MS/MS By matching 1 1 23242000 10438000 12805000 7140 1693 8153 18086;18087 17435 17435 1 VNGDASPAAAESGAK GQENGHVKVNGDASPA AAAESGAKEELQANGS K V N A K E 5 0 1 1 0 0 1 2 0 0 0 1 0 0 1 2 0 0 0 1 0 0 15 0 1343.6317 P29966 P29966 41 55 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 2.1381E-26 164.82 By MS/MS By MS/MS 3 3 77107000 42741000 34366000 7141 1776 8154;8155 18088;18089;18090;18091;18092;18093 17436;17437;17438;17439 17439 79 3363 4 VNGTTVSSPSTSLQR EQPQAEAKVNGTTVSS SPSTSLQRSDSSQPML K V N Q R S 0 1 1 0 0 1 0 1 0 0 1 0 0 0 1 4 3 0 0 2 0 0 15 0 1532.7794 A0A087WV90;E9PDN5;A0A087WTU7;A0A075B6G3;P11532;E7EQR9;F5GZY3;E7EQS5;F8VX32;E7ESB2;H0Y304 A0A087WV90 3601 3615 DMD Dystrophin yes no 2 0.010107 71.344 By MS/MS By matching 1 1 16564000 8974400 7589900 7142 10 8156 18094;18095 17440 17440 19 1 VNLEESSGVENSPAGARPK VLDFHLNRVNLEESSG SPAGARPKRKNKKSYD R V N P K R 2 1 2 0 0 0 3 2 0 0 1 1 0 0 2 3 0 0 0 2 0 0 19 1 1939.9599 Q8WVM8 Q8WVM8 292 310 SCFD1 Sec1 family domain-containing protein 1 yes yes 2;3 1.2687E-43 178.07 By MS/MS By MS/MS 2 2 279190000 158000000 121190000 7143 2561 8157 18096;18097;18098;18099 17441;17442;17443;17444;17445 17444 5235 5 VNLFPGLSPSALK SLGTKGLKVNLFPGLS GLSPSALKAKLRPRNR K V N L K A 1 0 1 0 0 0 0 1 0 0 3 1 0 1 2 2 0 0 0 1 0 0 13 0 1341.7656 Q9C0C2 Q9C0C2 1645 1657 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0040261 101.43 By MS/MS By MS/MS 1 1 3675100 3675100 0 7144 2791 8158 18100;18101 17446;17447 17446 5826 2 VNPSVNPSISPAHGVAR NSGMSIPRVNPSVNPS SPAHGVARSSTLPPSN R V N A R S 2 1 2 0 0 0 0 1 1 1 0 0 0 0 3 3 0 0 0 3 0 0 17 0 1700.8958 B5MCN7;Q15788 B5MCN7 235 251 NCOA1 Nuclear receptor coactivator 1 yes no 3 0.00061488 80.362 By MS/MS By matching 1 1 9526700 3869100 5657600 7145 576 8159 18102;18103 17448 17448 1058 1 VNQIGSVTESLQACK SCNCLLLKVNQIGSVT TESLQACKLAQANGWG K V N C K L 1 0 1 0 1 2 1 1 0 1 1 1 0 0 0 2 1 0 0 2 0 0 15 0 1632.8141 P06733 P06733 344 358 ENO1 Alpha-enolase yes yes 2 0.0018253 110.31 By MS/MS By MS/MS 1 1 16761000 8961400 7799900 7146 1646 8160 18104;18105 17449;17450 17449 2 VNQSALEAVTPSPSFQQR NPEETAARVNQSALEA PSPSFQQRHESLRPAA R V N Q R H 2 1 1 0 0 3 1 0 0 0 1 0 0 1 2 3 1 0 0 2 0 0 18 0 1957.9858 Q9UKG1 Q9UKG1 390 407 APPL1 DCC-interacting protein 13-alpha yes yes 2 0.00035642 114.9 By MS/MS By MS/MS 1 1 24960000 13192000 11767000 7147 3024 8161 18106;18107 17451;17452 17451 6375 2 VNSGDTEVGSSLLR VKAIPRRRVNSGDTEV EVGSSLLRHPSPELSR R V N L R H 0 1 1 1 0 0 1 2 0 0 2 0 0 0 0 3 1 0 0 2 0 0 14 0 1432.7158 O75592 O75592 3465 3478 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 2.8E-07 132.51 By MS/MS By MS/MS 1 1 37633000 17126000 20507000 7148 1550 8162 18108;18109 17453;17454;17455;17456 17454 2934 4 VNSGLSSDPHFEEPGPMVR PTRYEPQRVNSGLSSD EEPGPMVRGVGGTPRD R V N V R G 0 1 1 1 0 0 2 2 1 0 1 0 1 1 3 3 0 0 0 2 0 0 19 0 2053.9527 P48634 P48634 1523 1541 PRRC2A Protein PRRC2A yes yes 3 0.0036033 61.256 By MS/MS By MS/MS 1 1 11456000 6341300 5114600 7149 1846 8163 18110;18111 17457;17458 17457 716 3548 2 VNSTANAETQATSAFQTQKPLK KKKGSTTRVNSTANAE FQTQKPLKSTSLSLFY R V N L K S 4 0 2 0 0 3 1 0 0 0 1 2 0 1 1 2 4 0 0 1 0 0 22 1 2334.1816 P06400 P06400 622 643 RB1 Retinoblastoma-associated protein yes yes 3 0.0096023 63.998 By matching By MS/MS 1 1 8675100 5129700 3545400 7150 1645 8164 18112;18113 17459 17459 3106;7374 0 VPADTEVVCAPPTAYIDFAR IGTLNAAKVPADTEVV TAYIDFARQKLDPKIA K V P A R Q 4 1 0 2 1 0 1 0 0 1 0 0 0 1 3 0 2 0 1 3 0 0 20 0 2191.062 P60174 P60174 71 90 TPI1 Triosephosphate isomerase yes yes 2 0.0059469 73.887 By MS/MS By MS/MS 1 1 12605000 6231400 6373700 7151 1926 8165 18114;18115 17460;17461 17461 2 VPAEEITYETLKK NSPEKEERVPAEEITY ITYETLKKAIVDSVAV R V P K K A 1 0 0 0 0 0 3 0 0 1 1 2 0 0 1 0 2 0 1 1 0 0 13 1 1519.8134 H7BXG9;E7ESK9;Q9Y2G0 H7BXG9 551 563 EFR3B Protein EFR3 homolog B yes no 2 0.0036215 88.134 By MS/MS By MS/MS 1 1 0 0 0 7152 816 8166 18116;18117 17462;17463 17462 7083 2 VPASPLPGLER RKASSTAKVPASPLPG SPLPGLERKKTTPTPS K V P E R K 1 1 0 0 0 0 1 1 0 0 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1134.6397 E7ETY4;E9PC69;Q7KZI7 E7ETY4 419 429 MARK2 Serine/threonine-protein kinase MARK2 yes no 2 0.0021171 93.623 By MS/MS By MS/MS 1 1 22420000 12909000 9510600 7153 823 8167 18118;18119 17464;17465 17465 1519 2 VPDEEENEESDNEKETEK AWKEAQQKVPDEEENE DNEKETEKSDSVTDSG K V P E K S 0 0 2 2 0 0 8 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 18 1 2148.8819 P11388 P11388 1097 1114 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0032545 85.563 By MS/MS By matching 1 1 30089000 16976000 13113000 7154 1682 8168 18120;18121 17466 17466 3168 1 VPDSPENELK QALEKLEKVPDSPENE DSPENELKSRWENLLG K V P L K S 0 0 1 1 0 0 2 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 10 0 1126.5506 Q8NI35;A0A0U1RR46;A0A0X1KG69;A0A087WUZ6 Q8NI35 519 528 INADL InaD-like protein yes no 2 0.0052998 82.774 By MS/MS By matching 1 1 21328000 11850000 9477800 7155 2528 8169 18122;18123 17467 17467 5165 1 VPDSPSPAPSLEEGR ETSVIKERVPDSPSPA APSLEEGRRPGSHPSS R V P G R R 1 1 0 1 0 0 2 1 0 0 1 0 0 0 4 3 0 0 0 1 0 0 15 0 1536.742 A0A087WZP2;Q9UI36 A0A087WZP2 488 502 DACH1 Dachshund homolog 1 yes no 2 0.0014018 91.076 By MS/MS By MS/MS 1 1 20381000 11222000 9158300 7156 143 8170 18124;18125 17468;17469 17469 231;232;233 2 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPR RSPGSNSKVPEIEVTV SNVPFKPRGREFSFEA K V P P R G 1 2 6 0 0 2 3 2 0 1 0 1 0 1 6 2 5 0 0 5 0 0 37 2 3988.0039 P78347 P78347 681 717 GTF2I General transcription factor II-I yes yes 4 2.3122E-10 82.726 By MS/MS By MS/MS 1 1 76551000 36927000 39624000 7157 1962 8171 18126;18127 17470;17471;17472 17471 7505;7506;7507 3 VPEMGSFQDDPPSAFPK SRLPRHQKVPEMGSFQ DPPSAFPKGLGSELEP K V P P K G 1 0 0 2 0 1 1 1 0 0 0 1 1 2 4 2 0 0 0 1 0 0 17 0 1847.84 Q7Z4H9 Q7Z4H9 161 177 FAM220A Protein FAM220A yes yes 3 0.0090398 55.415 By matching By MS/MS 1 1 36694000 18427000 18268000 7158 2384 8172 18128;18129 17473 17473 961 4844 1 VPKPEPIPEPKEPSPEK TSTSDILKVPKPEPIP PKEPSPEKNSKKEKEK K V P E K N 0 0 0 0 0 0 4 0 0 1 0 3 0 0 7 1 0 0 0 1 0 0 17 2 1897.0197 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 247 263 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 5.4102E-05 123.72 By MS/MS By MS/MS 1 1 115780000 56394000 59390000 7159 511 8173 18130;18131 17474;17475 17475 966 2 VPKSPEHSAEPIR KAEGKVERVPKSPEHS EHSAEPIRTFIKAKEY R V P I R T 1 1 0 0 0 0 2 0 1 1 0 1 0 0 3 2 0 0 0 1 0 0 13 1 1445.7627 Q9ULH0 Q9ULH0 1552 1564 KIDINS220 Kinase D-interacting substrate of 220 kDa yes yes 3 0.0099793 60.08 By MS/MS By MS/MS 1 1 29905000 16664000 13241000 7160 3041 8174 18132;18133 17476;17477 17476 6403 2 VPLAHPEDMDPSDNYAEPIDTIFK NPRKQTSRVPLAHPED EPIDTIFKQKGYSDEI R V P F K Q 2 0 1 4 0 0 2 0 1 2 1 1 1 1 4 1 1 0 1 1 0 0 24 0 2713.2581 A0A0A0MSK6;Q13017 A0A0A0MSK6 1077 1100 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 1.3556E-14 144.18 By MS/MS By MS/MS 2 3 148110000 74083000 74028000 7161 252 8175;8176;8177 18134;18135;18136;18137;18138 17478;17479;17480;17481;17482 17479 102 444;8016 5 VPLAPITDPQQLQLSPLK ________________ QLQLSPLKGLSLVDKE R V P L K G 1 0 0 1 0 3 0 0 0 1 4 1 0 0 4 1 1 0 0 1 0 0 18 0 1957.1248 P31350 P31350 6 23 RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes yes 2;3 3.423E-43 176.39 By MS/MS By MS/MS 2 2 180920000 110940000 69973000 7162 1782 8178 18139;18140;18141;18142 17483;17484;17485;17486 17485 3367 4 VPLDLSPR ETSAQTERVPLDLSPR VPLDLSPRLEETLDFG R V P P R L 0 1 0 1 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1 0 0 8 0 895.51272 R4GNG2;Q9UKV5 R4GNG2 193 200 AMFR E3 ubiquitin-protein ligase AMFR yes no 2 0.010579 90.05 By MS/MS By MS/MS 1 1 20662000 11372000 9289800 7163 3030 8179 18143;18144 17487;17488;17489;17490;17491;17492 17492 6385 6 VPLSNENSQVPQSPEDWR CTSQQTCKVPLSNENS PQSPEDWRKSEVSPRI K V P W R K 0 1 2 1 0 2 2 0 0 0 1 0 0 0 3 3 0 1 0 2 0 0 18 0 2080.9814 Q8IZT6 Q8IZT6 413 430 ASPM Abnormal spindle-like microcephaly-associated protein yes yes 2 0.00066651 94.45 By matching By MS/MS 1 1 18362000 8884300 9477500 7164 2450 8180 18145;18146 17493;17494 17494 5006 2 VPLSPLSLLAGPADAR GASPHHRRVPLSPLSL LAGPADARRSQQQLPK R V P A R R 3 1 0 1 0 0 0 1 0 0 4 0 0 0 3 2 0 0 0 1 0 0 16 0 1575.8984 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 430 445 CRTC2 CREB-regulated transcription coactivator 2 yes no 2 0.0011018 92.773 By MS/MS By MS/MS 1 1 11331000 7175800 4155600 7165 2200 8181 18147;18148 17495;17496 17495 4405 2 VPMKCLTNIPWLGTLPCTR V P T R 0 1 1 0 2 0 0 1 0 1 3 1 1 0 3 0 3 1 0 1 0 0 19 1 2256.1581 REV__CON__P17690 yes yes 3 0.0083652 64.454 By MS/MS By MS/MS 2 1 516100000 399320000 116780000 + + 7166 3174 8182 18149;18150;18151 17497;17498;17499 17499 1259 2 VPPAINQFTQALDR AILYKRLKVPPAINQF QFTQALDRQTATQLLK K V P D R Q 2 1 1 1 0 2 0 0 0 1 1 0 0 1 2 0 1 0 0 1 0 0 14 0 1568.8311 Q5T8U3;P62424 Q5T8U3 103 116 RPL7A 60S ribosomal protein L7a yes no 3 8.0358E-06 129.37 By MS/MS 1 2601300 2601300 0 7167 1942 8183 18152 17500 17500 1 VPPAPVPCPPPSPGPSAVPSSPK PSEKVEVKVPPAPVPC SAVPSSPKSVATEERA K V P P K S 2 0 0 0 1 0 0 1 0 0 0 1 0 0 11 4 0 0 0 3 0 0 23 0 2218.1456 O95817 O95817 366 388 BAG3 BAG family molecular chaperone regulator 3 yes yes 2;3 2.0523E-07 132.78 By MS/MS By MS/MS 6 6 168650000 83549000 85106000 7168 1609 8184;8185 18153;18154;18155;18156;18157;18158;18159;18160;18161;18162;18163;18164 17501;17502;17503;17504;17505;17506;17507;17508;17509;17510;17511;17512;17513;17514;17515;17516;17517 17511 3049;3050;3051;3052 17 VPPPRSPQAQEAPVNIDEGLTGCTIQLLPAQDK GTLEKEEKVPPPRSPQ QLLPAQDKAIVFEIME K V P D K A 3 1 1 2 1 4 2 2 0 2 3 1 0 0 6 1 2 0 0 2 0 0 33 1 3538.809 E9PGC8;P78559 E9PGC8 1302 1334 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 3 1.0419E-06 75.301 By MS/MS By matching 1 1 41991000 23649000 18342000 7169 872 8186 18165;18166 17518;17519 17519 1613 2 VPSAACPPFPPHGAPVSASSSSSSPGGSR PGDKAGFRVPSAACPP SSSPGGSRGGSPHHSD R V P S R G 4 1 0 0 1 0 0 3 1 0 0 0 0 1 7 9 0 0 0 2 0 0 29 0 2734.2769 Q9H7S9 Q9H7S9 194 222 ZNF703 Zinc finger protein 703 yes yes 3 6.6822E-05 76.237 By MS/MS By MS/MS 4 4 49164000 24206000 24959000 7170 2851 8187 18167;18168;18169;18170;18171;18172;18173;18174 17520;17521;17522;17523;17524;17525;17526 17526 6005;6006;6007;6008;6009;6010;6011 6 VPSAPGQESPIPDPK PPEMVGQRVPSAPGQE ESPIPDPKLMPHMKNE R V P P K L 1 0 0 1 0 1 1 1 0 1 0 1 0 0 5 2 0 0 0 1 0 0 15 0 1517.7726 E9PGC8;P78559 E9PGC8 2048 2062 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.00061251 106.6 By MS/MS By MS/MS 1 1 40684000 18088000 22596000 7171 872 8188 18175;18176 17527;17528;17529 17529 1614 3 VPSGIFDVNSR AWGSSIVKVPSGIFDV GIFDVNSRKSSTGSIS K V P S R K 0 1 1 1 0 0 0 1 0 1 0 0 0 1 1 2 0 0 0 2 0 0 11 0 1189.6091 R4GNB2;R4GN35;Q5VZ89;X6RAE7 R4GNB2 987 997 DENND4C DENN domain-containing protein 4C yes no 2 0.021342 64.224 By MS/MS 1 3561300 3561300 0 7172 2281 8189 18177 17530 17530 4585 1 VPSPDHR EEDEKLERVPSPDHRR RVPSPDHRRRSYRDLD R V P H R R 0 1 0 1 0 0 0 0 1 0 0 0 0 0 2 1 0 0 0 1 0 0 7 0 806.4035 Q8NAV1 Q8NAV1 207 213 PRPF38A Pre-mRNA-splicing factor 38A yes yes 2 0.025506 96.668 By MS/MS By MS/MS 1 1 111490000 48522000 62964000 7173 2493 8190 18178;18179 17531;17532 17532 5089 2 VPSPLEGSEGDGDTD QRCARTDKVPSPLEGS SEGDGDTD________ K V P T D - 0 0 0 3 0 0 2 3 0 0 1 0 0 0 2 2 1 0 0 1 0 0 15 0 1473.6107 F5H168;F5H1S9;Q9Y606 F5H168 120 134 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 2 1.6099E-53 194.06 By MS/MS By MS/MS 3 1 50984000 36301000 14683000 7174 958 8191;8192 18180;18181;18182;18183 17533;17534;17535;17536;17537 17534 1805;7131 5 VPSSDEEVVEEPQSR STEPRASRVPSSDEEV VVEEPQSRRTRMSLGT R V P S R R 0 1 0 1 0 1 4 0 0 0 0 0 0 0 2 3 0 0 0 3 0 0 15 0 1685.7744 Q9C0C2 Q9C0C2 1618 1632 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 4.4329E-06 125.39 By MS/MS By MS/MS 1 1 44282000 22718000 21565000 7175 2791 8193 18184;18185 17538;17539;17540 17540 5809;5810 3 VPSTPPPK SGEERAAKVPSTPPPK VPSTPPPKAAPPPPAL K V P P K A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 1 1 0 0 1 0 0 8 0 821.4647 Q9H7N4 Q9H7N4 973 980 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.029834 83.998 By MS/MS By matching 1 1 28096000 18108000 9987900 7176 2849 8194 18186;18187 17541;17542 17541 2 VPSVESLFR FAQKLQLRVPSVESLF PSVESLFRSPIKESLF R V P F R S 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 2 0 0 0 2 0 0 9 0 1032.5604 Q13439;E7EVX2;Q86W71 Q13439 69 77 GOLGA4 Golgin subfamily A member 4 yes no 2 0.0012676 121.36 By MS/MS By MS/MS 1 1 94095000 49713000 44381000 7177 2060 8195 18188;18189 17543;17544 17544 4062 2 VPTANVSVVDLTCR KLTGMAFRVPTANVSV SVVDLTCRLEKPAKYD R V P C R L 1 1 1 1 1 0 0 0 0 0 1 0 0 0 1 1 2 0 0 4 0 0 14 0 1529.7872 P04406;E7EUT5 P04406 235 248 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 1.3206E-15 145.14 By MS/MS By MS/MS 1 1 64819000 39527000 25291000 7178 1635 8196 18190;18191 17545;17546 17546 2 VPVASPSAHNISSSGGAPDR RPSTAPQRVPVASPSA SSGGAPDRTNFPRGVS R V P D R T 3 1 1 1 0 0 0 2 1 1 0 0 0 0 3 5 0 0 0 2 0 0 20 0 1904.9341 E7ETY4;E9PC69;Q7KZI7 E7ETY4 485 504 MARK2 Serine/threonine-protein kinase MARK2 yes no 2 0.011063 61.561 By MS/MS By matching 1 1 13185000 7470000 5715200 7179 823 8197 18192;18193 17547 17547 1520 1 VPVLISPTLK LPTTHNHKVPVLISPT VLISPTLKHTPADVQL K V P L K H 0 0 0 0 0 0 0 0 0 1 2 1 0 0 2 1 1 0 0 2 0 0 10 0 1065.6798 P42684 P42684 931 940 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.00042785 114.71 By MS/MS By MS/MS 1 1 76422000 42982000 33440000 7180 1828 8198 18194;18195 17548;17549 17548 3452 2 VPVNLLNSPDCDVK KQSCPFGRVPVNLLNS NSPDCDVKTDDSVVPC R V P V K T 0 0 2 2 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 3 0 0 14 0 1568.7868 P33981 P33981 274 287 TTK Dual specificity protein kinase TTK yes yes 2 2.4965E-33 175.19 By MS/MS By MS/MS 1 1 91673000 46623000 45050000 7181 1789 8199 18196;18197 17550;17551;17552 17552 3376 3 VQAGPGSPR GRGAAVSRVQAGPGSP QAGPGSPRRARGRQQV R V Q P R R 1 1 0 0 0 1 0 2 0 0 0 0 0 0 2 1 0 0 0 1 0 0 9 0 867.45626 I3L0U5;Q6PK04;I3L4F6 I3L0U5 13 21 CCDC137 Coiled-coil domain-containing protein 137 yes no 2 0.010796 77.062 By MS/MS By MS/MS 1 3 41938000 10202000 31736000 7182 1301 8200 18198;18199;18200;18201 17553;17554;17555;17556;17557;17558 17557 2417 6 VQAYEEPSVASSPNGK LTQDWESRVQAYEEPS VASSPNGKESDLRRSE R V Q G K E 2 0 1 0 0 1 2 1 0 0 0 1 0 0 2 3 0 0 1 2 0 0 16 0 1661.7897 Q99575 Q99575 719 734 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 2;3 1.05E-141 241.8 By MS/MS By MS/MS 3 2 355970000 215610000 140350000 7183 2727 8201;8202 18202;18203;18204;18205;18206 17559;17560;17561;17562;17563;17564 17564 127 5662;5663 6 VQAYEEPSVASSPNGKESDLR LTQDWESRVQAYEEPS NGKESDLRRSEVPCAP R V Q L R R 2 1 1 1 0 1 3 1 0 0 1 1 0 0 2 4 0 0 1 2 0 0 21 1 2262.0764 Q99575 Q99575 719 739 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 3 0.0097258 56.972 By MS/MS By matching 1 1 53292000 24526000 28766000 7184 2727 8203 18207;18208 17565 17565 127 5662;5663 1 VQDNHLSPNK ENMGKKDKVQDNHLSP DNHLSPNKWKWTKRTL K V Q N K W 0 0 2 1 0 1 0 0 1 0 1 1 0 0 1 1 0 0 0 1 0 0 10 0 1150.5731 Q14721 Q14721 478 487 KCNB1 Potassium voltage-gated channel subfamily B member 1 yes yes 2 0.0073303 73.26 By MS/MS By matching 1 1 8117700 4725200 3392500 7185 2107 8204 18209;18210 17566 17566 4170 1 VQDTSNTGLGEDIIHQLSK EENDFTEKVQDTSNTG DIIHQLSKSEEKELRK K V Q S K S 0 0 1 2 0 2 1 2 1 2 2 1 0 0 0 2 2 0 0 1 0 0 19 0 2054.028 Q8IWA0 Q8IWA0 792 810 WDR75 WD repeat-containing protein 75 yes yes 3 1.1207E-10 136.61 By MS/MS By MS/MS 1 1 106700000 50286000 56416000 7186 2427 8205 18211;18212 17567;17568 17567 4962 2 VQEKPDSPGGSTQIQR SKPCGSPRVQEKPDSP GGSTQIQRYLDAERLA R V Q Q R Y 0 1 0 1 0 3 1 2 0 1 0 1 0 0 2 2 1 0 0 1 0 0 16 1 1725.8646 M0R0P8;Q13459;M0R300 M0R0P8 1284 1299 MYO9B Unconventional myosin-IXb yes no 2 0.00064283 103.39 By MS/MS By MS/MS 1 1 36347000 19200000 17147000 7187 1419 8206 18213;18214 17569;17570 17569 2601 2 VQELETSLAELR EKECSMSRVQELETSL ETSLAELRNQM_____ R V Q L R N 1 1 0 0 0 1 3 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 12 0 1386.7355 B7ZC06;Q08379 B7ZC06 459 470 GOLGA2 Golgin subfamily A member 2 yes no 2 0.00093434 113.69 By MS/MS 1 2663700 0 2663700 7188 597 8207 18215 17571 17571 1088;7002 1 VQENDGKEPPPVVNYEEDAR QKELLEQKVQENDGKE VNYEEDARSVTSMERK K V Q A R S 1 1 2 2 0 1 4 1 0 0 0 1 0 0 3 0 0 0 1 3 0 0 20 1 2284.0608 P16591 P16591 388 407 FER Tyrosine-protein kinase Fer yes yes 3 9.9287E-05 97.271 By MS/MS By MS/MS 1 1 11870000 4321100 7548500 7189 1709 8208 18216;18217 17572;17573;17574;17575 17574 8232 4 VQERPPSASSSSDMSLSEPPQPLARK GESDKENKVQERPPSA PPQPLARKDLMESTWM K V Q R K D 2 2 0 1 0 2 2 0 0 0 2 1 1 0 5 7 0 0 0 1 0 0 26 2 2780.3763 Q5VT06 Q5VT06 701 726 CEP350 Centrosome-associated protein 350 yes yes 3 0.026662 50.531 By MS/MS 1 0 0 0 7190 2263 8209 18218 17576 17576 905 4532;4533;4534;4535 1 VQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVK LAAAEKFKVQGEAVSN DETGVEVKDIELVMSQ K V Q V K D 1 0 2 1 0 4 10 2 0 1 0 1 0 0 1 2 4 0 0 6 0 0 35 0 3859.7607 F8VZJ2;F8W0W4;H0YHX9;Q13765;E9PAV3 F8VZJ2 66 100 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 3;4 3.4016E-33 146.83 By MS/MS By MS/MS 23 22 2250500000 884110000 1366400000 7191 841 8210 18219;18220;18221;18222;18223;18224;18225;18226;18227;18228;18229;18230;18231;18232;18233;18234;18235;18236;18237;18238;18239;18240;18241;18242;18243;18244;18245;18246;18247;18248;18249;18250;18251;18252;18253;18254;18255;18256;18257;18258;18259;18260;18261;18262;18263 17577;17578;17579;17580;17581;17582;17583;17584;17585;17586;17587;17588;17589;17590;17591;17592;17593;17594;17595;17596;17597;17598;17599;17600;17601;17602;17603;17604;17605;17606;17607;17608;17609;17610;17611;17612;17613;17614;17615;17616;17617;17618;17619;17620;17621;17622;17623;17624;17625;17626;17627;17628;17629;17630;17631;17632;17633;17634;17635;17636;17637;17638;17639;17640;17641 17637 1569;1570;7102 61 VQGLLENGDSVTSPEK GSGKDMPKVQGLLENG DSVTSPEKVAPEEGSG K V Q E K V 0 0 1 1 0 1 2 2 0 0 2 1 0 0 1 2 1 0 0 2 0 0 16 0 1671.8315 P41229 P41229 1347 1362 KDM5C Lysine-specific demethylase 5C yes yes 2 0.0033677 90.926 By matching By MS/MS 2 2 24655000 12298000 12357000 7192 1820 8211;8212 18264;18265;18266;18267 17642;17643 17643 85 3430;3431 1 VQGSPLKK LSSQERMKVQGSPLKK VQGSPLKKLFTSTGLK K V Q K K L 0 0 0 0 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 8 1 855.5178 Q02952 Q02952 511 518 AKAP12 A-kinase anchor protein 12 yes yes 2 0.013508 89.029 By MS/MS By MS/MS 2 2 17095000 9606100 7488600 7193 1991 8213 18268;18269;18270;18271 17644;17645;17646;17647 17644 3832 2 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR ITIRRKKKVQIPVSRP DEEIHDPRSGRSGVVN K V Q P R S 0 2 1 5 0 1 5 0 1 2 0 0 0 0 5 3 0 0 1 3 0 0 29 1 3362.5175 A0A087X0K9;G5E9E7;G3V1L9;Q07157;H0YKB1 A0A087X0K9 100 128 TJP1 Tight junction protein ZO-1 yes no 3 4.2115E-10 95.444 By MS/MS By MS/MS 2 1 175750000 87007000 88745000 7194 156 8214;8215 18272;18273;18274 17648;17649;17650 17649 256;257 3 VQISPDSGGLPER IQQDSGCKVQISPDSG DSGGLPERSVSLTGAP K V Q E R S 0 1 0 1 0 1 1 2 0 1 1 0 0 0 2 2 0 0 0 1 0 0 13 0 1353.6888 A0A087WTP3;Q92945;M0QXW7;M0QYH3 A0A087WTP3 178 190 KHSRP Far upstream element-binding protein 2 yes no 2 0.007156 77.372 By MS/MS By MS/MS 1 2 148500000 76794000 71709000 7195 39 8216;8217 18275;18276;18277 17651;17652;17653 17651 74 3 VQKVEPWNSVR HMESSKLKVQKVEPWN VEPWNSVRVTFNIPRE K V Q V R V 0 1 1 0 0 1 1 0 0 0 0 1 0 0 1 1 0 1 0 3 0 0 11 1 1340.7201 Q14686;F6M2K4;F6M2K2 Q14686 85 95 NCOA6 Nuclear receptor coactivator 6 yes no 3 0.027928 48.44 By MS/MS 1 2061600 2061600 0 7196 2103 8218 18278 17654 17654 0 VQMTSPSSTGSPMFK SSQALTNKVQMTSPSS STGSPMFKFSSPIVKS K V Q F K F 0 0 0 0 0 1 0 1 0 0 0 1 2 1 2 4 2 0 0 1 0 0 15 0 1583.7324 P49790 P49790 512 526 NUP153 Nuclear pore complex protein Nup153 yes yes 2 1.6768E-43 189.33 By MS/MS By MS/MS 12 11 421640000 231970000 189670000 7197 1859 8219;8220;8221;8222;8223 18279;18280;18281;18282;18283;18284;18285;18286;18287;18288;18289;18290;18291;18292;18293;18294;18295;18296;18297;18298;18299;18300;18301 17655;17656;17657;17658;17659;17660;17661;17662;17663;17664;17665;17666;17667;17668;17669;17670;17671;17672;17673;17674 17674 721;722 3595;3596;3597;3598;7470;7471 19 VQNEKIENLTR EEKDLLQKVQNEKIEN EKIENLTRMLVTSSSL K V Q T R M 0 1 2 0 0 1 2 0 0 1 1 1 0 0 0 0 1 0 0 1 0 0 11 1 1342.7205 D6RBW0;A0A087X0P0;Q02224 D6RBW0 389 399 CENPE Kinesin-like protein;Centromere-associated protein E yes no 2 0.031862 45.357 By MS/MS 1 0 0 0 7198 158 8224 18302 17675 17675 1 VQPPPETPAEEEMETETEAEALQEK ETEDGSDKVQPPPETP EAEALQEKEQDDTAAM K V Q E K E 3 0 0 0 0 2 9 0 0 0 1 1 1 0 4 0 3 0 0 1 0 0 25 0 2811.2644 C9JFV4;Q8IZL8;E7EV54 C9JFV4 1126 1150 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 3 0.0082298 47.795 By MS/MS By matching 1 1 24961000 13209000 11752000 7199 662 8225 18303;18304 17676 17676 259 7029 1 VQQKRHCSTYQPTPPLSPASK VEPEIKRKVQQKRHCS PPLSPASKKCLTHLED K V Q S K K 1 1 0 0 1 3 0 0 1 0 1 2 0 0 4 3 2 0 1 1 0 0 21 2 2409.2223 Q9GZR1;D6RG09;H0Y4F4;F8W6D9 Q9GZR1 205 225 SENP6 Sentrin-specific protease 6 yes no 3 0.030585 43.895 By MS/MS 1 0 0 0 7200 2797 8226 18305 17677 17677 1 VQQTVQDLFGR GGMTRMPKVQQTVQDL TVQDLFGRAPSKAVNP K V Q G R A 0 1 0 1 0 3 0 1 0 0 1 0 0 1 0 0 1 0 0 2 0 0 11 0 1289.6728 P38646 P38646 395 405 HSPA9 Stress-70 protein, mitochondrial yes yes 2 0.0025765 105.2 By MS/MS By MS/MS 1 1 9710800 6059200 3651600 7201 1808 8227 18306;18307 17678;17679 17679 2 VQQYNLGQEDK V Q D K 0 0 1 1 0 3 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1320.631 REV__F5GYF8 yes no 2 0.014706 76.221 By MS/MS 1 14689000 14689000 0 + 7202 3181 8228 18308 17680 17680 8517 1 VQSLEGEKLSPK YASLTSEKVQSLEGEK EGEKLSPKSDISPLTP K V Q P K S 0 0 0 0 0 1 2 1 0 0 2 2 0 0 1 2 0 0 0 1 0 0 12 1 1313.7191 P46821 P46821 1770 1781 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 0.0005991 115.09 By MS/MS By MS/MS 2 2 87777000 49646000 38132000 7203 1840 8229 18309;18310;18311;18312 17681;17682;17683 17681 3522 3 VQSPKPITGGLGAFTK CPIGSHPKVQSPKPIT GGLGAFTKVIIKQEPG K V Q T K V 1 0 0 0 0 1 0 3 0 1 1 2 0 1 2 1 2 0 0 1 0 0 16 1 1599.8984 Q9ULM3 Q9ULM3 573 588 YEATS2 YEATS domain-containing protein 2 yes yes 2;3 0.00010877 109.67 By MS/MS By MS/MS 2 2 38848000 23033000 15815000 7204 3046 8230 18313;18314;18315;18316 17684;17685 17684 6432 2 VQTLSNQPLLKSPAPPLLHVAALGQK AVPWNAVKVQTLSNQP HVAALGQKQGILGAQP K V Q Q K Q 3 0 1 0 0 3 0 1 1 0 6 2 0 0 4 2 1 0 0 2 0 0 26 1 2719.5749 Q8N163;H0YC69;E5RGU7;E5RFJ3;H0YC58 Q8N163 113 138 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 4 0.012046 43.807 By MS/MS By matching 1 1 16909000 8969500 7939900 7205 2457 8231 18317;18318 17686 17686 5023 1 VQVAALQASPPLDQDDR IVVKRPRKVQVAALQA PPLDQDDRAFEVMDEF K V Q D R A 3 1 0 3 0 3 0 0 0 0 2 0 0 0 2 1 0 0 0 2 0 0 17 0 1821.9221 A0A1B0GTW1;Q9UDY2;U3KQJ2;B1AN86 A0A1B0GTW1 181 197 TJP2 Tight junction protein ZO-2 yes no 2 0.01057 67.997 By matching By MS/MS 1 1 7546100 4562300 2983800 7206 415 8232 18319;18320 17687 17687 775 1 VQVEEDR LEFVYTAKVQVEEDRV KVQVEEDRVQRMLEVA K V Q D R V 0 1 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 7 0 873.41921 Q9H116 Q9H116 99 105 GZF1 GDNF-inducible zinc finger protein 1 yes yes 1 0.022344 68.485 By matching By MS/MS 1 1 6233200 2575900 3657300 7207 2810 8233 18321;18322 17688 17688 0 VRASLSDLSSLDDVEGMSVR NPGLSKERVRASLSDL DVEGMSVRQLKEILAR R V R V R Q 1 2 0 3 0 0 1 1 0 0 3 0 1 0 0 5 0 0 0 3 0 0 20 1 2135.0528 A0A087WTM5;H7BYJ1;Q969K3 A0A087WTM5 59 78 RNF34 E3 ubiquitin-protein ligase RNF34 yes no 2;3 0.00010587 108.45 By MS/MS By MS/MS 3 3 71065000 35415000 35650000 7208 37 8234;8235 18323;18324;18325;18326;18327;18328 17689;17690;17691;17692;17693;17694;17695;17696 17694 17 67;68;69 8 VRPASTGGLSLLPPPPGGK EGAAGNPRVRPASTGG LPPPPGGKTSTLIPPP R V R G K T 1 1 0 0 0 0 0 4 0 0 3 1 0 0 5 2 1 0 0 1 0 0 19 1 1800.0258 D6RB24;Q9NVZ3 D6RB24 116 134 NECAP2 Adaptin ear-binding coat-associated protein 2 yes no 3 0.0032516 67.902 By MS/MS 1 7903200 7903200 0 7209 749 8236 18329 17697;17698 17698 7053 2 VSAEAEVAPVSPEVTQEVVEEHCASPEDK SLTPNEIKVSAEAEVA HCASPEDKTLEVVSPS K V S D K T 4 0 0 1 1 1 7 0 1 0 0 1 0 0 3 3 1 0 0 6 0 0 29 0 3121.4398 P46821 P46821 1288 1316 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.00010878 77.689 By MS/MS By MS/MS 2 3 89369000 42102000 47268000 7210 1840 8237;8238 18330;18331;18332;18333;18334 17699;17700;17701;17702;17703 17700 3523;3524;7457 5 VSAGEPGSHPSPAPR CRRGKEPKVSAGEPGS SHPSPAPRRSPAGNKQ K V S P R R 2 1 0 0 0 0 1 2 1 0 0 0 0 0 4 3 0 0 0 1 0 0 15 0 1444.7059 C9JME2;Q9Y4F1;A0A1B0GV68 C9JME2 417 431 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 2 0.0002063 115.58 By MS/MS By matching 1 1 16024000 8621500 7402700 7211 676 8239 18335;18336 17704 17704 1252 1 VSAVSNSQHYPHR SAVYQASRVSAVSNSQ NSQHYPHRGSGGVHQY R V S H R G 1 1 1 0 0 1 0 0 2 0 0 0 0 0 1 3 0 0 1 2 0 0 13 0 1480.7171 E7EWN3;Q9C0A6 E7EWN3 1424 1436 SETD5 SET domain-containing protein 5 yes no 3 0.030427 46.378 By MS/MS 1 0 0 0 7212 836 8240 18337 17705 17705 1 VSCHDSDDDIMR IGLGIKNRVSCHDSDD DSDDDIMRNDREYDSG R V S M R N 0 1 0 4 1 0 0 0 1 1 0 0 1 0 0 2 0 0 0 1 0 0 12 0 1448.566 F8WE42;F5H101;Q76FK4;F5GWN9 F8WE42 360 371 NOL8 Nucleolar protein 8 yes no 2 0.00080394 101.65 By MS/MS By MS/MS 2 2 27222000 14111000 13112000 7213 957 8241;8242 18338;18339;18340;18341 17706;17707 17706 354 1803;1804 2 VSDAVQPNNYLIR NTGVSKPRVSDAVQPN QPNNYLIRTEPEQGTL R V S I R T 1 1 2 1 0 1 0 0 0 1 1 0 0 0 1 1 0 0 1 2 0 0 13 0 1487.7732 Q99569;A0A0D9SF60;H0YFB1;E7EST6 Q99569 105 117 PKP4 Plakophilin-4 yes no 2 0.009621 79.489 By MS/MS By matching 1 1 13636000 7838200 5797300 7214 2726 8243 18342;18343 17708 17708 8445 1 VSDQNSPVLPK AYMLFYQRVSDQNSPV QNSPVLPKKSRVSVVR R V S P K K 0 0 1 1 0 1 0 0 0 0 1 1 0 0 2 2 0 0 0 2 0 0 11 0 1182.6245 Q9UPU5 Q9UPU5 2042 2052 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 1.1301E-05 131.08 By MS/MS By MS/MS 1 1 297450000 163250000 134200000 7215 3069 8244 18344;18345 17709;17710 17710 6496 2 VSDSLTDLALK LSAQVNTKVSDSLTDL SLTDLALK________ K V S L K - 1 0 0 2 0 0 0 0 0 0 3 1 0 0 0 2 1 0 0 1 0 0 11 0 1160.6289 Q8N3C0 Q8N3C0 2192 2202 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 2 0.0021188 92.792 By matching By MS/MS 1 1 9258400 5259300 3999200 7216 2465 8245 18346;18347 17711 17711 5036 1 VSEPLLSATSASPTQVVSQLPMGR VPSPLEARVSEPLLSA VSQLPMGRDSREMLFL R V S G R D 2 1 0 0 0 2 1 1 0 0 3 0 1 0 3 5 2 0 0 3 0 0 24 0 2454.2788 W0Z7M9;E7ER32;A0A087X287;Q969V6 W0Z7M9 180 203 mkl1;MKL1 MKL/myocardin-like protein 1 yes no 3 0.0052063 51.783 By MS/MS By MS/MS 1 1 53677000 27418000 26259000 7217 3229 8246 18348;18349 17712;17713 17713 1267 6833;6834;7972 2 VSFELFADK VDGEPLGRVSFELFAD SFELFADKVPKTAENF R V S D K V 1 0 0 1 0 0 1 0 0 0 1 1 0 2 0 1 0 0 0 1 0 0 9 0 1054.5335 P62937;F8WE65;C9J5S7 P62937 20 28 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 2 0.0090562 108.98 By MS/MS By MS/MS 1 1 3001900 3001900 0 7218 1950 8247 18350;18351 17714;17715 17714 2 VSFELFADKVPK VDGEPLGRVSFELFAD LFADKVPKTAENFRAL R V S P K T 1 0 0 1 0 0 1 0 0 0 1 2 0 2 1 1 0 0 0 2 0 0 12 1 1378.7497 P62937;F8WE65;C9J5S7 P62937 20 31 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 2 1.0135E-18 163.84 By matching By MS/MS 1 1 15160000 9776800 5383400 7219 1950 8248 18352;18353 17716 17716 1 VSGAGFSPSSK FGIIGNDRVSGAGFSP AGFSPSSKMEGGHFVP R V S S K M 1 0 0 0 0 0 0 2 0 0 0 1 0 1 1 4 0 0 0 1 0 0 11 0 1022.5033 Q9C0C2 Q9C0C2 1132 1142 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0019533 99.161 By MS/MS By MS/MS 1 1 29722000 15933000 13790000 7220 2791 8249 18354;18355 17717;17718 17718 5827;5828 2 VSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPAR TDAPTSPRVSGEEELH SLASPPARDALQLRSQ R V S A R D 3 1 0 0 0 3 3 4 1 0 4 0 0 0 8 4 2 0 0 2 0 0 35 0 3500.79 Q9UPN7 Q9UPN7 729 763 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 yes yes 3;4 0.00087597 53.942 By MS/MS By MS/MS 2 3 52279000 30079000 22200000 7221 3065 8250 18356;18357;18358;18359;18360 17719;17720;17721 17719 6477 2 VSGPDPKPGSNCSPAQSVLSEVPSVPTNGMAK SPLSKKRRVSGPDPKP VPTNGMAKNGSEADID R V S A K N 2 0 2 1 1 1 1 3 0 0 1 2 1 0 6 6 1 0 0 4 0 0 32 1 3193.5384 P22314;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3;Q5JRS2 P22314 12 43 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 3 0.019723 41.209 By matching By MS/MS 1 1 23295000 11440000 11854000 7222 1747 8251 18361;18362 17722 17722 75 655 3290;3291 1 VSGRTSPPLLDR VPLSAYERVSGRTSPP TSPPLLDRARSRTPPS R V S D R A 0 2 0 1 0 0 0 1 0 0 2 0 0 0 2 2 1 0 0 1 0 0 12 1 1296.715 Q9UQ35 Q9UQ35 2393 2404 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0040588 71.545 By MS/MS By MS/MS 1 1 168810000 77591000 91220000 7223 3074 8252 18363;18364 17723;17724;17725 17725 6608 3 VSGTLDTPEK VLRKKKKKVSGTLDTP GTLDTPEKTVDSQGPT K V S E K T 0 0 0 1 0 0 1 1 0 0 1 1 0 0 1 1 2 0 0 1 0 0 10 0 1045.5292 H7BZL0;C9J808;Q9BYG3 H7BZL0 26 35 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 2 0.0070837 102.05 By MS/MS By MS/MS 1 2 19081000 10753000 8327900 7224 643 8253 18365;18366;18367 17726;17727 17726 1201;7018;7019 2 VSGTLDTPEKTVDSQGPTPVCTPTFLER VLRKKKKKVSGTLDTP CTPTFLERRKSQVAEL K V S E R R 0 1 0 2 1 1 2 2 0 0 2 1 0 1 4 2 6 0 0 3 0 0 28 1 3031.4808 H7BZL0;C9J808;Q9BYG3 H7BZL0 26 53 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 3 0.0066024 52.739 By MS/MS By MS/MS 1 1 132330000 67654000 64680000 7225 643 8254 18368;18369 17728;17729 17728 1201;7018;7019;7020;7021 2 VSGVDGYETEGIR ARAETNSRVSGVDGYE GYETEGIRGLRALGVR R V S I R G 0 1 0 1 0 0 2 3 0 1 0 0 0 0 0 1 1 0 1 2 0 0 13 0 1380.6521 Q14566 Q14566 270 282 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.00059962 94.82 By matching By MS/MS 1 1 6365800 4260600 2105200 7226 2091 8255 18370;18371 17730 17730 0 VSGVGGTTYEISV PTRGGVKKVSGVGGTT GTTYEISV________ K V S S V - 0 0 0 0 0 0 1 3 0 1 0 0 0 0 0 2 2 0 1 3 0 0 13 0 1267.6296 Q9C0B5;Q9ULC8 Q9C0B5 703 715 ZDHHC5;ZDHHC8 Palmitoyltransferase ZDHHC5;Probable palmitoyltransferase ZDHHC8 no no 2 0.031052 53.089 By MS/MS 1 3492600 3492600 0 7227 2790;3037 8256 18372 17731 17731 0 VSHLLGINVTDFTR PDNTAAQKVSHLLGIN INVTDFTRGILTPRIK K V S T R G 0 1 1 1 0 0 0 1 1 1 2 0 0 1 0 1 2 0 0 2 0 0 14 0 1570.8467 P35579 P35579 374 387 MYH9 Myosin-9 yes yes 3 0.016628 92.269 By MS/MS By MS/MS 1 1 7026600 4845900 2180700 7228 1795 8257 18373;18374 17732;17733 17732 2 VSHSPPPK PSPPPKRRVSHSPPPK VSHSPPPKQRSSPVTK R V S P K Q 0 0 0 0 0 0 0 0 1 0 0 1 0 0 3 2 0 0 0 1 0 0 8 0 847.4552 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 644 651 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.022966 70.525 By MS/MS 1 5664000 0 5664000 7229 511 8258 18375 17734 17734 967 1 VSIAAYSQAGKGRLSSPR LKPGTEYRVSIAAYSQ KGRLSSPRHVTTLSQD R V S P R H 3 2 0 0 0 1 0 2 0 1 1 1 0 0 1 4 0 0 1 1 0 0 18 2 1847.0013 Q63HQ2 Q63HQ2 112 129 EGFLAM Pikachurin yes yes 3 0.027972 40.798 By MS/MS By matching 1 1 11411000 5992200 5419300 7230 2286 8259 18376;18377 17735 17735 4597;4598;4599 1 VSIGNITLSPAISR MASLDELKVSIGNITL TLSPAISRHSPVQMNR K V S S R H 1 1 1 0 0 0 0 1 0 3 1 0 0 0 1 3 1 0 0 1 0 0 14 0 1426.8144 Q0JRZ9 Q0JRZ9 379 392 FCHO2 F-BAR domain only protein 2 yes yes 2 5.3187E-16 146.3 By MS/MS By MS/MS 1 1 25026000 12690000 12336000 7231 2021 8260 18378;18379 17736;17737 17736 3923 2 VSLEPHQGPGTPESK TTRQQRKRVSLEPHQG GPGTPESKKATSCFPR R V S S K K 0 0 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 15 0 1561.7736 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1974 1988 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 0.0040038 73.252 By MS/MS By MS/MS 2 2 173930000 104740000 69192000 7232 118 8261 18380;18381;18382;18383 17738;17739;17740 17739 6858 3 VSLERLDLDLTADSQPPVFK GLMRKVPRVSLERLDL DSQPPVFKVFPGSTTE R V S F K V 1 1 0 3 0 1 1 0 0 0 4 1 0 1 2 2 1 0 0 2 0 0 20 1 2242.1845 Q13263;M0R0K9 Q13263 488 507 TRIM28 Transcription intermediary factor 1-beta yes no 2;3 0.00034135 84.312 By matching By MS/MS 1 2 40425000 25920000 14505000 7233 2054 8262 18384;18385;18386 17741;17742 17741 4042 2 VSLGSSIFQLMAMQATADQMARVDRPR V S P R 4 3 0 2 0 3 0 1 0 1 2 0 3 1 1 3 1 0 0 2 0 0 27 2 2978.4889 REV__Q99798 yes no 3 0.032356 40.986 By MS/MS 1 4974400 0 4974400 + 7234 3168 8263 18387 17743 17743 1258 1 VSLLGPVTTPEHQLLK TPQTPDIKVSLLGPVT TPEHQLLKTPSSSSLS K V S L K T 0 0 0 0 0 1 1 1 1 0 4 1 0 0 2 1 2 0 0 2 0 0 16 0 1730.9931 Q9H0H5 Q9H0H5 572 587 RACGAP1 Rac GTPase-activating protein 1 yes yes 2;3 0.00039954 91.845 By MS/MS By matching 2 1 17468000 13184000 4283500 7235 2803 8264 18388;18389;18390 17744;17745 17744 7845 2 VSNLQVSPK DLEITDSKVSNLQVSP SNLQVSPKSEDISKFD K V S P K S 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 2 0 0 0 2 0 0 9 0 970.54475 A0A0C4DGF9;O00443 A0A0C4DGF9 253 261 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes no 2 0.00072797 118.61 By MS/MS By matching 1 1 61122000 32678000 28444000 7236 317 8265 18391;18392 17746 17746 550 1 VSNSPPLGR EKLPTSEKVSNSPPLG SNSPPLGRSKTQLSPS K V S G R S 0 1 1 0 0 0 0 1 0 0 1 0 0 0 2 2 0 0 0 1 0 0 9 0 925.49813 H0Y9Y2 H0Y9Y2 161 169 BOD1L1 yes yes 2 0.025148 62.166 By MS/MS By MS/MS 1 1 15132000 8704300 6427600 7237 1155 8266 18393;18394 17747;17748;17749 17748 2195 3 VSPAHSPPENGLDK NEDPATPRVSPAHSPP PPENGLDKARSLKKDA R V S D K A 1 0 1 1 0 0 1 1 1 0 1 1 0 0 3 2 0 0 0 1 0 0 14 0 1446.7103 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 262 275 TLE3 Transducin-like enhancer protein 3 yes no 2 0.0004396 100.77 By MS/MS By MS/MS 2 2 52261000 28278000 23982000 7238 986 8267;8268 18395;18396;18397;18398 17750;17751;17752;17753;17754 17751 42 1851;1852 5 VSPFGLR PQPQLQLRVSPFGLRT RVSPFGLRTSPYGSSL R V S L R T 0 1 0 0 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 1 0 0 7 0 774.43882 J3KNZ9;H3BRE6 J3KNZ9 332 338 FBRS yes no 2 0.021607 104.44 By MS/MS By MS/MS 1 1 48492000 20976000 27515000 7239 1324 8269 18399;18400 17755;17756 17756 2456 2 VSPGLPSPNLENGAPAVGPVQPR WSTASSQRVSPGLPSP AVGPVQPRTPSVSAPL R V S P R T 2 1 2 0 0 1 1 3 0 0 2 0 0 0 6 2 0 0 0 3 0 0 23 0 2252.1913 C9JRJ5;Q9UGP4 C9JRJ5 271 293 LIMD1 LIM domain-containing protein 1 yes no 2;3 0.0060159 55.972 By MS/MS By MS/MS 2 2 28022000 15068000 12954000 7240 689 8270 18401;18402;18403;18404 17757;17758;17759 17758 1273 3 VSPLNLSSVTP ANNTPTRRVSPLNLSS LNLSSVTP________ R V S T P - 0 0 1 0 0 0 0 0 0 0 2 0 0 0 2 3 1 0 0 2 0 0 11 0 1112.6077 Q9UJX2 Q9UJX2 587 597 CDC23 Cell division cycle protein 23 homolog yes yes 1;2 4.2468E-09 155.47 By MS/MS By MS/MS 2 2 20804000 10834000 9970100 7241 3013 8271 18405;18406;18407;18408 17760;17761;17762 17760 6342;7902 3 VSPPASPGP ARSWLSPRVSPPASPG SPPASPGP________ R V S G P - 1 0 0 0 0 0 0 1 0 0 0 0 0 0 4 2 0 0 0 1 0 0 9 0 807.41267 A0A0C4DGU2;Q9Y4U1 A0A0C4DGU2 217 225 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes no 2 0.025166 57.149 By matching By MS/MS 1 1 8913000 4266500 4646500 7242 328 8272 18409;18410 17763 17763 578;579 1 VSPSDTTPLVSR TPQDYEMRVSPSDTTP DTTPLVSRSVPPVKLE R V S S R S 0 1 0 1 0 0 0 0 0 0 1 0 0 0 2 3 2 0 0 2 0 0 12 0 1257.6565 Q9HCK8 Q9HCK8 2045 2056 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 2 0.0095993 74.537 By MS/MS By MS/MS 1 1 45082000 23573000 21509000 7243 2877 8273 18411;18412 17764;17765 17764 6062 2 VSPSKSPSLSPSPPSPLEK ISAVSSEKVSPSKSPS SPPSPLEKTPLGERSV K V S E K T 0 0 0 0 0 0 1 0 0 0 2 2 0 0 6 7 0 0 0 1 0 0 19 1 1920.0204 P46821 P46821 1251 1269 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.0011408 75.524 By MS/MS By MS/MS 1 1 10688000 5312600 5375200 7244 1840 8274 18413;18414 17766;17767;17768 17768 3511;3512;3513;3514;3525 3 VSPSTSYTPSR YVNANQARVSPSTSYT STSYTPSRHKRSYEDD R V S S R H 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 1 1 0 0 11 0 1180.5724 Q9BTE3 Q9BTE3 153 163 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 2 0.0033019 85.672 By matching By MS/MS 1 1 105100000 51912000 53192000 7245 2748 8275 18415;18416 17769 17769 5716 1 VSSPAPMEGGEEEEELLGPK LDPGRFSKVSSPAPME EEELLGPKLEEEEEEE K V S P K L 1 0 0 0 0 0 6 3 0 0 2 1 1 0 3 2 0 0 0 1 0 0 20 0 2083.962 O14497;H0Y488;A0A1B0GTU5 O14497 1753 1772 ARID1A AT-rich interactive domain-containing protein 1A yes no 2;3 0.00010979 106.31 By MS/MS By MS/MS 2 2 73150000 37182000 35969000 7246 1448 8276 18417;18418;18419;18420 17770;17771;17772;17773 17771 513 2668;2669 4 VSSPLPSPSAMTDAANSQAAAK IQPGTVNRVSSPLPSP ANSQAAAKLALRKQLE R V S A K L 6 0 1 1 0 1 0 0 0 0 1 1 1 0 3 5 1 0 0 1 0 0 22 0 2100.0157 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 316 337 GATAD2B Transcriptional repressor p66-beta yes no 2;3 6.8927E-05 106.39 By MS/MS By MS/MS 4 5 132460000 71116000 61346000 7247 398 8277;8278;8279 18421;18422;18423;18424;18425;18426;18427;18428;18429 17774;17775;17776;17777;17778;17779;17780;17781;17782;17783 17779 155 732;733;734;735 10 VSSPLSPLSPGIK SHSPTPGKVSSPLSPL SPLSPGIKSPTIPRAE K V S I K S 0 0 0 0 0 0 0 1 0 1 2 1 0 0 3 4 0 0 0 1 0 0 13 0 1280.734 Q9P2B4 Q9P2B4 555 567 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 2 0.0099922 73.834 By MS/MS By MS/MS 2 2 25857000 15139000 10718000 7248 2976 8280 18430;18431;18432;18433 17784;17785;17786 17784 6266;6267;6268 3 VSSPLSPLSPGIKSPTIPR SHSPTPGKVSSPLSPL IKSPTIPRAERGNPPP K V S P R A 0 1 0 0 0 0 0 1 0 2 2 1 0 0 5 5 1 0 0 1 0 0 19 1 1932.1044 Q9P2B4 Q9P2B4 555 573 CTTNBP2NL CTTNBP2 N-terminal-like protein yes yes 3 0.0010127 78.234 By MS/MS By MS/MS 3 4 73863000 31119000 42744000 7249 2976 8281;8282;8283 18434;18435;18436;18437;18438;18439;18440 17787;17788;17789;17790 17787 6266;6267;6268;6269;7894 4 VSSPTVNTTLR GGWYKACKVSSPTVNT PTVNTTLRNLGALYRR K V S L R N 0 1 1 0 0 0 0 0 0 0 1 0 0 0 1 2 3 0 0 2 0 0 11 0 1173.6354 Q9NSK0 Q9NSK0 458 468 KLC4 Kinesin light chain 4 yes yes 2 0.0024514 87.806 By MS/MS By MS/MS 1 1 38611000 20169000 18442000 7250 2916 8284 18441;18442 17791;17792 17792 6151 2 VSSPVFGATSSIK PQEELPTRVSSPVFGA FGATSSIKSGLDLNTS R V S I K S 1 0 0 0 0 0 0 1 0 1 0 1 0 1 1 4 1 0 0 2 0 0 13 0 1278.682 F6Q6H0;I6L8A6;Q99708 F6Q6H0 325 337 RBBP8 DNA endonuclease RBBP8 yes no 2 0.0056662 79.23 By MS/MS By MS/MS 1 1 53781000 29810000 23971000 7251 990 8285 18443;18444 17793;17794 17793 1863 2 VSSSCLDLPDSTEEK EHYRIETRVSSSCLDL LPDSTEEKGAPIETLG R V S E K G 0 0 0 2 1 0 2 0 0 0 2 1 0 0 1 4 1 0 0 1 0 0 15 0 1665.7403 Q5VT52 Q5VT52 1067 1081 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 0.00012666 116.78 By MS/MS By MS/MS 1 1 28278000 14697000 13581000 7252 2264 8286 18445;18446 17795;17796 17795 4546 2 VSTTTDSPVSPAQAASPFIPLDELSSK SSCNSPAKVSTTTDSP PLDELSSK________ K V S S K - 3 0 0 2 0 1 1 0 0 1 2 1 0 1 4 6 3 0 0 2 0 0 27 0 2744.3756 Q96E09 Q96E09 261 287 FAM122A Protein FAM122A yes yes 2;3 1.6092E-15 140.74 By MS/MS By MS/MS 3 3 91946000 55636000 36311000 7253 2640 8287;8288 18447;18448;18449;18450;18451;18452 17797;17798;17799;17800 17799 5444;5445;5446;7784;7785;7786 4 VSVSPGR SNRTRKSRVSVSPGRT RVSVSPGRTSGKVTKH R V S G R T 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 2 0 0 0 2 0 0 7 0 700.38679 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 423 429 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0074604 119.21 By MS/MS By MS/MS 1 1 76011000 41742000 34269000 7254 511 8289 18453;18454 17801;17802;17803 17803 968 3 VSVVVEFKMEESMK MDAEGKSRVSVVVEFK FKMEESMKKAAEVLNK R V S M K K 0 0 0 0 0 0 3 0 0 0 0 2 2 1 0 2 0 0 0 4 0 0 14 1 1640.8154 A0A087X0X3 A0A087X0X3 113 126 HNRNPM yes yes 3 0.029321 47.606 By MS/MS 1 0 0 0 7255 163 8290 18455 17804 17804 69;70 1 VSWQDLK IVENLSSRVSWQDLKD RVSWQDLKDFMRQAGE R V S L K D 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 1 0 1 0 1 0 0 7 0 874.45487 Q13243 Q13243 119 125 SRSF5 Serine/arginine-rich splicing factor 5 yes yes 2 0.026464 81.525 By matching By MS/MS 1 1 6809500 2854700 3954800 7256 2052 8291 18456;18457 17805 17805 4029 1 VSWSPVPGATQYRIIVR ELPGQRVRVSWSPVPG TQYRIIVRSTQGVERT R V S V R S 1 2 0 0 0 1 0 1 0 2 0 0 0 0 2 2 1 1 1 3 0 0 17 1 1928.0632 Q02388 Q02388 526 542 COL7A1 Collagen alpha-1(VII) chain yes yes 2 0.013679 54.764 By MS/MS 1 2879200 2879200 0 7257 1986 8292 18458 17806 17806 3812;7515;8315 1 VTADVINAAEK LIVRSATKVTADVINA DVINAAEKLQVVGRAG K V T E K L 3 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 11 0 1129.5979 Q5SZU1;O43175 Q5SZU1 25 35 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.011967 79.974 By MS/MS By MS/MS 1 1 9663300 4794700 4868600 7258 1489 8293 18459;18460 17807;17808 17808 2 VTDALPEPEPPGAMAASEDEEEEEEALEAMQSR ALGKAPSKVTDALPEP ALEAMQSRLATLRS__ K V T S R L 6 1 0 2 0 1 10 1 0 0 2 0 2 0 4 2 1 0 0 1 0 0 33 0 3556.5345 Q9Y3E7 Q9Y3E7 184 216 CHMP3 Charged multivesicular body protein 3 yes yes 3;4 0.00011695 61.725 By MS/MS By MS/MS 3 3 317570000 174310000 143260000 7259 3107 8294;8295 18461;18462;18463;18464;18465;18466 17809;17810;17811;17812;17813 17812 1239;1240 6666 5 VTDDLVCLVYK SDGNLCVKVTDDLVCL DLVCLVYKTDQAQDVK K V T Y K T 0 0 0 2 1 0 0 0 0 0 2 1 0 0 0 0 1 0 1 3 0 0 11 0 1323.6744 P49458 P49458 42 52 SRP9 Signal recognition particle 9 kDa protein yes yes 2 0.0032666 102.62 By MS/MS 1 1773000 0 1773000 7260 1855 8296 18467 17814 17814 1 VTEGLTDVILYHQPDDK QILEEFSKVTEGLTDV LYHQPDDKKKNRGFCF K V T D K K 0 0 0 3 0 1 1 1 1 1 2 1 0 0 1 0 2 0 1 2 0 0 17 0 1941.9684 B7Z645;O60506 B7Z645 168 184 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 3 0.03038 81.656 By matching By MS/MS 1 1 7229700 2695000 4534700 7261 590 8297 18468;18469 17815 17815 1 VTEGLVDVILYHQPDDK NILEEFSKVTEGLVDV LYHQPDDKKKNRGFCF K V T D K K 0 0 0 3 0 1 1 1 1 1 2 1 0 0 1 0 1 0 1 3 0 0 17 0 1939.9891 B4DT28;O43390 B4DT28 130 146 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 3 0.011187 93.754 By MS/MS 1 3897600 3897600 0 7262 560 8298 18470 17816 17816 1 VTEGTIREEQEYEEEVEEEPRPAAK GEYRPHHRVTEGTIRE EEPRPAAKVVEREEAV R V T A K V 2 2 0 0 0 1 10 1 0 1 0 1 0 0 2 0 2 0 1 2 0 0 25 2 2946.3731 O43491;E9PK52;E9PHY5;H0Y5B0;E9PMV8;Q6R5J7 O43491 762 786 EPB41L2 Band 4.1-like protein 2 yes no 3;4 2.831E-132 222.92 By MS/MS By MS/MS 2 2 120760000 64383000 56379000 7263 1502 8299 18471;18472;18473;18474 17817;17818;17819;17820;17821;17822;17823 17821 8199 7 VTEHGTPKPFR EEECEVERVTEHGTPK HGTPKPFRKFDSVAFG R V T F R K 0 1 0 0 0 0 1 1 1 0 0 1 0 1 2 0 2 0 0 1 0 0 11 1 1267.6673 Q9NZN5;E9PMR6 Q9NZN5 731 741 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 3 0.019982 56.956 By MS/MS By MS/MS 1 1 8159400 4710800 3448600 7264 2962 8300 18475;18476 17824;17825 17824 2 VTEPYNDLVK EKLMEMLKVTEPYNDL EPYNDLVKEELNMIQG K V T V K E 0 0 1 1 0 0 1 0 0 0 1 1 0 0 1 0 1 0 1 2 0 0 10 0 1176.6027 Q6P4Q7 Q6P4Q7 347 356 CNNM4 Metal transporter CNNM4 yes yes 2 0.027964 68.224 By MS/MS 1 3168100 0 3168100 7265 2321 8301 18477 17826 17826 1 VTGTEGSSSTLVDYTSTSSTGGSPVRK VKGKVRRKVTGTEGSS TGGSPVRKSEEKTDTK K V T R K S 0 1 0 1 0 0 1 4 0 0 1 1 0 0 1 7 6 0 1 3 0 0 27 1 2660.2777 Q7Z6E9 Q7Z6E9 1255 1281 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 3 6.4605E-05 84.602 By matching By MS/MS 1 2 15000000 6839100 8161300 7266 2393 8302 18478;18479;18480 17827;17828 17828 7690 2 VTIAQGGVLPNIQAVLLPK ELNKLLGKVTIAQGGV IQAVLLPKKTESHHKA K V T P K K 2 0 1 0 0 2 0 2 0 2 3 1 0 0 2 0 1 0 0 3 0 0 19 0 1930.1615 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;P20671;P0C0S8;H0YFX9;Q16777;Q6FI13;Q93077;Q7L7L0;P04908 A0A0U1RR32 101 119 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST1H2AD;HIST1H2AG;HIST2H2AC;HIST2H2AA3;HIST1H2AC;HIST3H2A;HIST1H2AB Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 1-D;Histone H2A type 1;Histone H2A;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-B/E yes no 2 3.7981E-43 202.61 By MS/MS By MS/MS 1 1 64999000 31634000 33365000 7267 394 8303 18481;18482 17829;17830;17831 17830 3 VTKNEEPSEEEIDAPKPK VVSSKTKKVTKNEEPS EIDAPKPKKMKKEKEM K V T P K K 1 0 1 1 0 0 5 0 0 1 0 3 0 0 3 1 1 0 0 1 0 0 18 2 2039.0059 Q9NR30 Q9NR30 114 131 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.0012488 91.091 By MS/MS By MS/MS 1 1 40979000 19579000 21400000 7268 2905 8304 18483;18484 17832;17833 17833 6123 2 VTLTSEEEAR NGISDLVKVTLTSEEE LTSEEEARLKKSADTL K V T A R L 1 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 10 0 1133.5564 P00338 P00338 306 315 LDHA L-lactate dehydrogenase A chain yes yes 2 0.013577 80.455 By MS/MS By MS/MS 1 1 20184000 10347000 9836000 7269 1621 8305 18485;18486 17834;17835 17835 1 VTLYNTDQDGSDSPR AINTVTNKVTLYNTDQ QDGSDSPRSSLNNSLS K V T P R S 0 1 1 3 0 1 0 1 0 0 1 0 0 0 1 2 2 0 1 1 0 0 15 0 1666.7435 C9JXI1;C9JVP0;Q9UPW0 C9JXI1 22 36 FOXJ3 Forkhead box protein J3 yes no 2 6.8604E-67 205.33 By MS/MS By MS/MS 1 1 60198000 27882000 32316000 7270 696 8306 18487;18488 17836;17837;17838 17838 1291 3 VTNDISPESSPGVGR FGVESDKRVTNDISPE ESSPGVGRRRTKTPHT R V T G R R 0 1 1 1 0 0 1 2 0 1 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1513.7372 A6NNN6;E7ETA6;Q15154;E5RGQ4;E9PGW9;E7EV93 A6NNN6 60 74 PCM1 Pericentriolar material 1 protein yes no 2 2.929E-34 179.66 By MS/MS By MS/MS 2 2 197900000 104100000 93806000 7271 484 8307;8308 18489;18490;18491;18492 17839;17840;17841;17842 17839 878;879;880 4 VTPPEGYEVVTVFPK CEKHARERVTPPEGYE EVVTVFPK________ R V T P K - 0 0 0 0 0 0 2 1 0 0 0 1 0 1 3 0 2 0 1 4 0 0 15 0 1660.8712 O00151 O00151 315 329 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.0013539 108.56 By MS/MS By MS/MS 1 1 55719000 26204000 29515000 7272 1426 8309 18493;18494 17843;17844 17843 8174 2 VTPTKESYTEEIVSEAESHVSGISR SSVRKKPKVTPTKESY SHVSGISRIVLPTEKT K V T S R I 1 1 0 0 0 0 5 1 1 2 0 1 0 0 1 5 3 0 1 3 0 0 25 1 2734.3297 J3KP30;Q5QJE6;E9PRB3 J3KP30 128 152 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 3 0.00049526 72.302 By MS/MS 1 17439000 17439000 0 7273 1325 8310 18495 17845 17845 2457;7248 1 VTQEQYELYCEMGSTFQLCK PTPQDHIKVTQEQYEL GSTFQLCKICAENDKD K V T C K I 0 0 0 0 2 3 3 1 0 0 2 1 1 1 0 1 2 0 2 1 0 0 20 0 2513.0913 P22681;A0A0U1RR39;A0A1B0GW38;A0A0U1RQX8;B5MC15;Q13191 P22681 363 382 CBL;CBLB E3 ubiquitin-protein ligase CBL;E3 ubiquitin-protein ligase CBL-B yes no 3 0.032329 42.904 By MS/MS 1 0 0 0 7274 1751 8311 18496 17846 17846 1 VTQHESDNENEIQIQNK DSLEVERRVTQHESDN NEIQIQNKLKKDFPKQ R V T N K L 0 0 3 1 0 3 3 0 1 2 0 1 0 0 0 1 1 0 0 1 0 0 17 0 2024.9399 Q5VZL5 Q5VZL5 117 133 ZMYM4 Zinc finger MYM-type protein 4 yes yes 2;3 4.4282E-10 137.69 By MS/MS By MS/MS 2 2 180760000 99479000 81279000 7275 2283 8312 18497;18498;18499;18500 17847;17848;17849 17847 4594 3 VTQSNFAVGYK NFETAKSRVTQSNFAV SNFAVGYKTDEFQLHT R V T Y K T 1 0 1 0 0 1 0 1 0 0 0 1 0 1 0 1 1 0 1 2 0 0 11 0 1212.6139 P21796;C9JI87 P21796 164 174 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 0.014645 78.149 By MS/MS 1 2947800 0 2947800 7276 1744 8313 18501 17850;17851 17850 2 VTSFSTPPTPER PASPMHERVTSFSTPP STPPTPERNNRPAFFS R V T E R N 0 1 0 0 0 0 1 0 0 0 0 0 0 1 3 2 3 0 0 1 0 0 12 0 1317.6565 B0QY16;Q6ICG6 B0QY16 170 181 KIAA0930 Uncharacterized protein KIAA0930 yes no 2 0.0010935 84.734 By MS/MS By MS/MS 1 1 17371000 9725000 7645800 7277 512 8314 18502;18503 17852;17853 17853 6978;6979 2 VTSGGVSESPSGFSK KKGAKRPRVTSGGVSE ESPSGFSKHIQSNLDF R V T S K H 0 0 0 0 0 0 1 3 0 0 0 1 0 1 1 5 1 0 0 2 0 0 15 0 1424.6783 E7EPP6;O14757;J3KN87 E7EPP6 294 308 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 9.5772E-05 119 By MS/MS By matching 1 1 144990000 81005000 63984000 7278 803 8315 18504;18505 17854 17854 1435 1 VTSLANLIPPVK KRVKPLSRVTSLANLI ANLIPPVKATPLKRFS R V T V K A 1 0 1 0 0 0 0 0 0 1 2 1 0 0 2 1 1 0 0 2 0 0 12 0 1250.7598 C9J5K8;C9J609;C9JNF2;H7C4P0;C9J586;E7EU49;E9PG37;Q9NR81 C9J5K8 77 88 ARHGEF3 Rho guanine nucleotide exchange factor 3 yes no 2 0.014913 89.43 By MS/MS 1 0 0 0 7279 637 8316 18506 17855 17855 1192 1 VTSLANLISPVR KRVRPLARVTSLANLI ANLISPVRNGAVRRFG R V T V R N 1 1 1 0 0 0 0 0 0 1 2 0 0 0 1 2 1 0 0 2 0 0 12 0 1268.7452 Q7Z628 Q7Z628 98 109 NET1 Neuroepithelial cell-transforming gene 1 protein yes yes 2 8.8772E-26 172.85 By MS/MS By MS/MS 2 2 13301000 7460500 5840500 7280 2392 8317 18507;18508;18509;18510 17856;17857;17858;17859 17858 4873;4874 4 VTSPTTYVLDEDEPR DLIESSCKVTSPTTYV VLDEDEPRFLEEVDYS K V T P R F 0 1 0 2 0 0 2 0 0 0 1 0 0 0 2 1 3 0 1 2 0 0 15 0 1720.8156 J3KNS1;Q9UPW5 J3KNS1 1218 1232 AGTPBP1 Cytosolic carboxypeptidase 1 yes no 2 0.00063965 101.89 By MS/MS By MS/MS 1 1 31952000 12823000 19130000 7281 1322 8318 18511;18512 17860;17861;17862 17861 2450;7247 3 VTSRGPDEEAVVDLGK QMRPLLTRVTSRGPDE EAVVDLGKTSSTVNTK R V T G K T 1 1 0 2 0 0 2 2 0 0 1 1 0 0 1 1 1 0 0 3 0 0 16 1 1670.8475 E9PFN4 E9PFN4 17 32 SLC4A7 Anion exchange protein yes yes 2;3 0.0057799 93.342 By MS/MS By MS/MS 2 2 61561000 32299000 29261000 7282 867 8319 18513;18514;18515;18516 17863;17864 17863 1596 1 VTSSMSSPSMQPK ETLPANFRVTSSMSSP SSPSMQPKKMQMDGNV R V T P K K 0 0 0 0 0 1 0 0 0 0 0 1 2 0 2 5 1 0 0 1 0 0 13 0 1365.6268 Q13136 Q13136 1166 1178 PPFIA1 Liprin-alpha-1 yes yes 2 0.00036271 93.766 By MS/MS By MS/MS 2 2 14415000 5720100 8695000 7283 2045 8320;8321 18517;18518;18519;18520 17865;17866 17865 813;814 4014;4015 2 VTSSVPLPSGSTSSPGR VTRMRCWRVTSSVPLP GSTSSPGRGRGEVRLE R V T G R G 0 1 0 0 0 0 0 2 0 0 1 0 0 0 3 6 2 0 0 2 0 0 17 0 1614.8213 Q15036 Q15036 323 339 SNX17 Sorting nexin-17 yes yes 2;3 0.0014812 89.506 By MS/MS By MS/MS 2 2 278900000 201550000 77345000 7284 2121 8322 18521;18522;18523;18524 17867;17868;17869;17870 17868 4194;4195;4196;4197;7590 4 VTTEIQLPSQSPVEEQSPASLSSLR TFAKREDRVTTEIQLP PASLSSLRSRSTQMES R V T L R S 1 1 0 0 0 3 3 0 0 1 3 0 0 0 3 6 2 0 0 2 0 0 25 0 2682.3712 E9PMS6;E9PMP7;F8WD26;J3KP06;Q8WWI1;H0Y424;A0A0A0MTE2;E9PMT2 E9PMS6 422 446 LMO7 LIM domain only protein 7 yes no 3 0.00034515 69.981 By MS/MS By MS/MS 1 1 18507000 9740900 8766600 7285 915 8323 18525;18526 17871;17872 17872 1703 2 VTTVFGQPLDLHYMNNELSILLK KYEDVEHKVTTVFGQP NELSILLKNQDDLDKA K V T L K N 0 0 2 1 0 1 1 1 1 1 5 1 1 1 1 1 2 0 1 2 0 0 23 0 2644.3935 J3KRN4;J3QRB6;Q99759 J3KRN4 73 95 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 3 0.02196 42.123 By MS/MS 1 16479000 16479000 0 7286 1335 8324 18527 17873 17873 471 2474 1 VTYAEKLSPLTGQACR ETTKSADRVTYAEKLS PLTGQACRYCDLKELH R V T C R Y 2 1 0 0 1 1 1 1 0 0 2 1 0 0 1 1 2 0 1 1 0 0 16 1 1792.9142 Q9UKA4 Q9UKA4 1573 1588 AKAP11 A-kinase anchor protein 11 yes yes 2 0.028826 90.706 By MS/MS 1 6828700 0 6828700 7287 3021 8325 18528 17874 17874 1 VVDLLAPYAK EILVTGIKVVDLLAPY DLLAPYAKGGKIGLFG K V V A K G 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 2 0 0 10 0 1087.6277 H0YH81;P06576;F8W079 H0YH81 126 135 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 2 0.011711 82.426 By MS/MS By MS/MS 1 1 11241000 4909700 6331200 7288 1184 8326 18529;18530 17875;17876 17876 2 VVDLMAHMASKE NEFGYSNRVVDLMAHM MAHMASKE________ R V V K E - 2 0 0 1 0 0 1 0 1 0 1 1 2 0 0 1 0 0 0 2 0 0 12 1 1329.6421 P04406;E7EUT5 P04406 324 335 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 3 0.025606 47.991 By MS/MS 1 0 0 0 7289 1635 8327 18531 17877 17877 587 1 VVDYSQFQESDDADEDYGR SRPVRNRKVVDYSQFQ DADEDYGRDSGPPTKK K V V G R D 1 1 0 5 0 2 2 1 0 0 0 0 0 1 0 2 0 0 2 2 0 0 19 0 2236.9033 Q9H1E3 Q9H1E3 10 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 2.0934E-86 208.4 By MS/MS By MS/MS 31 26 2783700000 1240600000 1543000000 7290 2816 8328 18532;18533;18534;18535;18536;18537;18538;18539;18540;18541;18542;18543;18544;18545;18546;18547;18548;18549;18550;18551;18552;18553;18554;18555;18556;18557;18558;18559;18560;18561;18562;18563;18564;18565;18566;18567;18568;18569;18570;18571;18572;18573;18574;18575;18576;18577;18578;18579;18580;18581;18582;18583;18584;18585;18586;18587;18588 17878;17879;17880;17881;17882;17883;17884;17885;17886;17887;17888;17889;17890;17891;17892;17893;17894;17895;17896;17897;17898;17899;17900;17901;17902;17903;17904;17905;17906;17907;17908;17909;17910;17911;17912;17913;17914;17915;17916;17917;17918;17919;17920;17921;17922;17923;17924;17925;17926;17927;17928;17929;17930;17931;17932;17933;17934;17935;17936;17937;17938;17939;17940;17941;17942;17943;17944;17945;17946;17947;17948;17949;17950;17951;17952;17953;17954;17955;17956;17957 17924 5893;5894 77 VVEAVNSDSDSEFGIPK KRAPKQKKVVEAVNSD DSEFGIPKKTTTPKGK K V V P K K 1 0 1 2 0 0 2 1 0 1 0 1 0 1 1 3 0 0 0 3 0 0 17 0 1791.8527 Q02880 Q02880 1516 1532 TOP2B DNA topoisomerase 2-beta yes yes 2 0.00016245 114.99 By MS/MS By MS/MS 1 3 139990000 63228000 76765000 7291 1989 8329;8330 18589;18590;18591;18592 17958;17959;17960;17961;17962;17963;17964;17965 17963 99 3817;3818;3819 8 VVEAVNSDSDSEFGIPKK KRAPKQKKVVEAVNSD SEFGIPKKTTTPKGKG K V V K K T 1 0 1 2 0 0 2 1 0 1 0 2 0 1 1 3 0 0 0 3 0 0 18 1 1919.9476 Q02880 Q02880 1516 1533 TOP2B DNA topoisomerase 2-beta yes yes 2 2.6908E-06 132.5 By MS/MS By MS/MS 1 1 28562000 15065000 13497000 7292 1989 8331 18593;18594 17966;17967 17966 3817;3818;3819 2 VVESPDFSKDEDYLGK KQVVEAEKVVESPDFS KDEDYLGKVGMLNGGR K V V G K V 0 0 0 3 0 0 2 1 0 0 1 2 0 1 1 2 0 0 1 2 0 0 16 1 1826.8574 Q9Y6Y8 Q9Y6Y8 923 938 SEC23IP SEC23-interacting protein yes yes 2;3 0.0006267 98.421 By MS/MS By MS/MS 2 2 32897000 17178000 15719000 7293 3157 8332 18595;18596;18597;18598 17968;17969;17970 17969 6752 3 VVGGSLR QDTEVRSRVVGGSLRG RVVGGSLRGAQAASPA R V V L R G 0 1 0 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 2 0 0 7 0 686.40752 P18031;B4DSN5 P18031 374 380 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 2 0.027312 78.149 By matching By MS/MS 1 1 61325000 33253000 28072000 7294 1721 8333 18599;18600 17971 17971 3236 1 VVIGMDVAASEFFR GKAGYTDKVVIGMDVA VAASEFFRSGKYDLDF K V V F R S 2 1 0 1 0 0 1 1 0 1 0 0 1 2 0 1 0 0 0 3 0 0 14 0 1539.7755 P06733 P06733 240 253 ENO1 Alpha-enolase yes yes 2 0.0017243 98.898 By MS/MS By MS/MS 1 1 7673600 4191100 3482500 7295 1646 8334 18601;18602 17972;17973 17972 599 2 VVLAYEPVWAIGTGK DNVKDWSKVVLAYEPV VWAIGTGKTATPQQAQ K V V G K T 2 0 0 0 0 0 1 2 0 1 1 1 0 0 1 0 1 1 1 3 0 0 15 0 1601.8817 P60174;U3KQF3;U3KPZ0 P60174 198 212 TPI1 Triosephosphate isomerase yes no 2 0.0011336 111.63 By MS/MS 1 15813000 0 15813000 7296 1926 8335 18603 17974 17974 1 VVLDDKDYFLFR LPEYGGTKVVLDDKDY DKDYFLFRDGDILGKY K V V F R D 0 1 0 3 0 0 0 0 0 0 2 1 0 2 0 0 0 0 1 2 0 0 12 1 1528.7926 B8ZZ54;P61604 B8ZZ54 26 37 HSPE1 10 kDa heat shock protein, mitochondrial yes no 3 4.5392E-07 127.52 By MS/MS By MS/MS 1 1 3590500 3590500 0 7297 602 8336 18604;18605 17975;17976 17976 2 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR RAIPATRRVVLGDGVQ STTPGGTRIIYDRKFL R V V T R I 0 1 0 2 0 1 0 7 0 0 3 0 0 1 4 2 6 0 1 3 0 0 31 0 3046.5247 Q13541 Q13541 21 51 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 3;4 0.0042006 64.701 By MS/MS By MS/MS 2 2 120920000 89606000 31310000 7298 2063 8337 18606;18607;18608;18609 17977;17978;17979 17977 4074;4075;7558;7559;7560;7561;7562;8331 3 VVLHDGDPNEPVSDYINANIIMPEFETK ILPFDHTRVVLHDGDP IMPEFETKCNNSKPKK R V V T K C 1 0 3 3 0 0 3 1 1 3 1 1 1 1 3 1 1 0 1 3 0 0 28 0 3155.5121 Q06124 Q06124 290 317 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 3 0.0014101 59.732 By MS/MS By MS/MS 1 1 85914000 41103000 44811000 7299 2006 8338 18610;18611 17980;17981 17981 790 8321 2 VVLIGGKPDR CCPHSTDRVVLIGGKP LIGGKPDRVVECIKII R V V D R V 0 1 0 1 0 0 0 2 0 1 1 1 0 0 1 0 0 0 0 2 0 0 10 1 1052.6342 P61978;Q5T6W2 P61978 192 201 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 0.0050597 86.898 By MS/MS By MS/MS 1 1 6364200 3668400 2695900 7300 1931 8339 18612;18613 17982;17983 17983 2 VVLPSPK V V P K 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 2 0 0 7 0 738.46398 REV__Q92859 yes yes 2 0.026082 88.177 By MS/MS By MS/MS 2 2 64608000 32116000 32492000 + 7301 3221 8340 18614;18615;18616;18617 17984;17985 17984 6816 2 VVLVLAGR GKFMKPGKVVLVLAGR VVLVLAGRYSGRKAVI K V V G R Y 1 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 3 0 0 8 0 825.54362 P61353;K7ERY7 P61353 10 17 RPL27 60S ribosomal protein L27 yes no 2 0.017207 105.27 By MS/MS By MS/MS 1 1 11599000 6211600 5387200 7302 1930 8341 18618;18619 17986;17987 17986 2 VVNITSPGHDASSR RAEKGVARVVNITSPG PGHDASSRSPTTTASV R V V S R S 1 1 1 1 0 0 0 1 1 1 0 0 0 0 1 3 1 0 0 2 0 0 14 0 1438.7165 Q15723 Q15723 358 371 ELF2 ETS-related transcription factor Elf-2 yes yes 2 0.018554 66.059 By matching By MS/MS 1 1 7617900 4163700 3454200 7303 2153 8342 18620;18621 17988 17988 4277 1 VVNTDHGSPEQLQIPVTDSGR PSGSQRARVVNTDHGS IPVTDSGRHILEDSCA R V V G R H 0 1 1 2 0 2 1 2 1 1 1 0 0 0 2 2 2 0 0 3 0 0 21 0 2248.1084 Q6IQ49 Q6IQ49 271 291 SDE2 Protein SDE2 homolog yes yes 2;3 7.6336E-05 92.563 By MS/MS By MS/MS 2 2 267770000 146750000 121010000 7304 2306 8343 18622;18623;18624;18625 17989;17990;17991;17992 17990 4647;7660 4 VVPEDGSPEKR KEVQSSCRVVPEDGSP EDGSPEKRCPGGVLSC R V V K R C 0 1 0 1 0 0 2 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 11 1 1211.6146 Q02040 Q02040 531 541 AKAP17A A-kinase anchor protein 17A yes yes 2;3 0.0014569 98.368 By MS/MS By MS/MS 2 2 49976000 29119000 20857000 7305 1985 8344 18626;18627;18628;18629 17993;17994;17995;17996 17995 3811 4 VVPGQFDDADSSDSENR YRRLLMSRVVPGQFDD DSSDSENRDLKTVKEK R V V N R D 1 1 1 4 0 1 1 1 0 0 0 0 0 1 1 3 0 0 0 2 0 0 17 0 1836.7762 Q9BRS2;E9PFQ8 Q9BRS2 11 27 RIOK1 Serine/threonine-protein kinase RIO1 yes no 2 3.768E-23 160.43 By MS/MS By MS/MS 1 1 205510000 103300000 102210000 7306 2745 8345 18630;18631 17997;17998;17999;18000 18000 5700;5701;5702 4 VVPSFLPVDQGGSLVGR EGAPPEDKVVPSFLPV QGGSLVGRNGVGGMAK K V V G R N 0 1 0 1 0 1 0 3 0 0 2 0 0 1 2 2 0 0 0 4 0 0 17 0 1725.9414 Q14126 Q14126 668 684 DSG2 Desmoglein-2 yes yes 2;3 3.0965E-52 186.17 By MS/MS By MS/MS 2 2 148610000 86051000 62562000 7307 2083 8346 18632;18633;18634;18635 18001;18002;18003;18004 18003 4110 4 VVQEYIDAFSDYANFK EQYEFCYKVVQEYIDA FSDYANFK________ K V V F K - 2 0 1 2 0 1 1 0 0 1 0 1 0 2 0 1 0 0 2 2 0 0 16 0 1907.8941 P18433 P18433 787 802 PTPRA Receptor-type tyrosine-protein phosphatase alpha yes yes 2 3.5398E-15 145.17 By MS/MS 1 9692400 0 9692400 7308 1724 8347 18636 18005 18005 8236 1 VVSEDFLQDVSASTK EVKEANIRVVSEDFLQ QDVSASTKSLQELFLA R V V T K S 1 0 0 2 0 1 1 0 0 0 1 1 0 1 0 3 1 0 0 3 0 0 15 0 1623.7992 P09874 P09874 453 467 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 9.6289E-54 196.02 By MS/MS By MS/MS 1 1 31643000 18365000 13278000 7309 1665 8348 18637;18638 18006;18007 18006 2 VVSISSEHLEPITPTK VYLKDSEKVVSISSEH LEPITPTKNNKVKVIL K V V T K N 0 0 0 0 0 0 2 0 1 2 1 1 0 0 2 3 2 0 0 2 0 0 16 0 1735.9356 O00267 O00267 1022 1037 SUPT5H Transcription elongation factor SPT5 yes yes 3 0.018646 52.185 By matching By MS/MS 1 1 12599000 8489800 4109700 7310 1431 8349 18639;18640 18008 18008 1 VVSSEGGRPSVDLSFQPSQPLSK GRGIPIERVVSSEGGR QPSQPLSKSSSSPELQ R V V S K S 0 1 0 1 0 2 1 2 0 0 2 1 0 1 3 6 0 0 0 3 0 0 23 1 2400.2285 H3BMQ0;P49815;H3BQK4 H3BMQ0 1306 1328 TSC2 Tuberin yes no 3 0.00012107 80.109 By MS/MS By MS/MS 1 1 31853000 19238000 12615000 7311 1230 8350 18641;18642 18009;18010 18010 2300 1 VVSSTSEEEEAFTEK FTGIRPARVVSSTSEE EEEAFTEKFLKINCKY R V V E K F 1 0 0 0 0 0 5 0 0 0 0 1 0 1 0 3 2 0 0 2 0 0 15 0 1670.7523 Q8N573 Q8N573 199 213 OXR1 Oxidation resistance protein 1 yes yes 2 6.673E-54 193.98 By MS/MS By MS/MS 3 3 122830000 60893000 61936000 7312 2474 8351;8352 18643;18644;18645;18646;18647;18648 18011;18012;18013;18014;18015 18013 5058;5059;5060;7722 4 VVSSVSSSPR FQQSAFNRVVSSVSSS SSVSSSPRQTMDYDDE R V V P R Q 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 3 0 0 10 0 1003.5298 P29375 P29375 1324 1333 KDM5A Lysine-specific demethylase 5A yes yes 2 0.0028316 102.4 By MS/MS By MS/MS 1 1 15683000 7728300 7954600 7313 1775 8353 18649;18650 18016;18017 18016 3342;3343;3344 2 VVTQRSEIGEKQDTELQEK SLESHRAKVVTQRSEI QDTELQEKETPTQVYQ K V V E K E 0 1 0 1 0 3 4 1 0 1 1 2 0 0 0 1 2 0 0 2 0 0 19 2 2216.1285 H0Y2V6;Q5SW79 H0Y2V6 626 644 CEP170 Centrosomal protein of 170 kDa yes no 3 0.0034553 74.812 By matching By MS/MS 1 1 20580000 11409000 9170600 7314 1112 8354 18651;18652 18018 18018 2101 1 VVVSPTK AAATSAKKVVVSPTKK KVVVSPTKKVAVATPA K V V T K K 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 3 0 0 7 0 728.44324 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 70 NCL Nucleolin yes no 2 0.02555 96.034 By MS/MS By MS/MS 1 1 386320000 227460000 158860000 7315 1732 8355 18653;18654 18019;18020;18021;18022;18023 18020 3263 5 VVVSPTKK AAATSAKKVVVSPTKK VVVSPTKKVAVATPAK K V V K K V 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 71 NCL Nucleolin yes no 2 0.0042971 128.6 By MS/MS By MS/MS 1 2 1962600000 816210000 1146400000 7316 1732 8356 18655;18656;18657 18024;18025;18026;18027 18025 3263 4 VWNLANCK CGWDKLVKVWNLANCK VWNLANCKLKTNHIGH K V W C K L 1 0 2 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 8 0 1003.4909 D6RFX4;D6R9Z1;D6R9L0;P63244;D6RHH4;D6RAC2;J3KPE3;H0Y8W2;D6REE5;H0Y8R5;D6RBD0;H0YAM7 D6RFX4 135 142 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.0067015 97.473 By MS/MS 1 3016600 3016600 0 7317 728 8357 18658 18028 18028 0 VWSPLVTEEGK TVARSEHKVWSPLVTE PLVTEEGKRHPYKMNL K V W G K R 0 0 0 0 0 0 2 1 0 0 1 1 0 0 1 1 1 1 0 2 0 0 11 0 1243.6449 O00151 O00151 88 98 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.012018 71.976 By matching By MS/MS 1 1 13887000 6306800 7580100 7318 1426 8358 18659;18660 18029 18029 2620 1 VWSPLVTEEGKR TVARSEHKVWSPLVTE LVTEEGKRHPYKMNLA K V W K R H 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 1 1 1 0 2 0 0 12 1 1399.746 O00151 O00151 88 99 PDLIM1 PDZ and LIM domain protein 1 yes yes 2;3 0.0073423 78.287 By MS/MS By MS/MS 2 2 76688000 44485000 32203000 7319 1426 8359 18661;18662;18663;18664 18030;18031;18032;18033 18033 2620 4 VYAPASTLVDQPYANEGTVVVTER QSLIVTERVYAPASTL GTVVVTERVIQPHGGG R V Y E R V 3 1 1 1 0 1 2 1 0 0 1 0 0 0 2 1 3 0 2 5 0 0 24 0 2578.2915 Q14126 Q14126 967 990 DSG2 Desmoglein-2 yes yes 2;3 1.1401E-05 86.182 By MS/MS By MS/MS 2 2 92890000 50592000 42299000 7320 2083 8360 18665;18666;18667;18668 18034;18035;18036;18037 18037 8336 4 VYDQTNPYTDVR FGGEYRPKVYDQTNPY TNPYTDVRRRYWNAYM K V Y V R R 0 1 1 2 0 1 0 0 0 0 0 0 0 0 1 0 2 0 2 2 0 0 12 0 1469.6787 Q9UPU5 Q9UPU5 2017 2028 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.0012618 104.82 By matching By MS/MS 1 1 18997000 11259000 7737300 7321 3069 8361 18669;18670 18038 18038 8505 1 VYEDSGIPLPAESPK IKATVKRKVYEDSGIP PLPAESPKKGPKKVAS K V Y P K K 1 0 0 1 0 0 2 1 0 1 1 1 0 0 3 2 0 0 1 1 0 0 15 0 1600.7985 F8W038;H0YIS7;Q8IXM2;F8W1H0 F8W038 84 98 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 2;3 1.3081E-15 146.3 By MS/MS By MS/MS 2 2 426370000 232350000 194030000 7322 1028 8362 18671;18672;18673;18674 18039;18040;18041;18042 18039 1924 4 VYEDSGIPLPAESPKKGPK IKATVKRKVYEDSGIP ESPKKGPKKVASGVLS K V Y P K K 1 0 0 1 0 0 2 2 0 1 1 3 0 0 4 2 0 0 1 1 0 0 19 2 2011.0626 F8W038;H0YIS7;Q8IXM2;F8W1H0 F8W038 84 102 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 3 0.015549 60.765 By MS/MS By MS/MS 1 1 14613000 7748700 6864200 7323 1028 8363 18675;18676 18043;18044 18043 1924 2 VYEHTSRFSPK VDSEKSNKVYEHTSRF HTSRFSPKKTSSNCNG K V Y P K K 0 1 0 0 0 0 1 0 1 0 0 1 0 1 1 2 1 0 1 1 0 0 11 1 1349.6728 P46100;A0A096LNL9;A0A096LNW1;A0A096LNN3 P46100 308 318 ATRX Transcriptional regulator ATRX yes no 3 0.030074 46.704 By matching By MS/MS 1 1 23830000 13987000 9843700 7324 1837 8364 18677;18678 18045 18045 1 VYENVGLMQQQK EMREDSARVYENVGLM VGLMQQQKSFR_____ R V Y Q K S 0 0 1 0 0 3 1 1 0 0 1 1 1 0 0 0 0 0 1 2 0 0 12 0 1435.7129 Q06124 Q06124 583 594 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 2;3 1.2331E-119 241.13 By MS/MS By MS/MS 3 3 365130000 127080000 238050000 7325 2006 8365;8366 18679;18680;18681;18682;18683;18684 18046;18047;18048;18049;18050;18051;18052;18053 18052 791 8322 8 VYESIGQYGGETVK LEPITDERVYESIGQY QYGGETVKIVRIEKAR R V Y V K I 0 0 0 0 0 1 2 3 0 1 0 1 0 0 0 1 1 0 2 2 0 0 14 0 1528.7409 Q8N3R9 Q8N3R9 242 255 MPP5 MAGUK p55 subfamily member 5 yes yes 2 0.00030957 119.74 By MS/MS By MS/MS 1 1 39047000 17380000 21667000 7326 2467 8367 18685;18686 18054;18055 18054 8395 2 VYKYCSK LYNRKTSRVYKYCSKL RVYKYCSKLSEVFEQE R V Y S K L 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 1 0 0 2 1 0 0 7 1 946.45824 Q09472 Q09472 1138 1144 EP300 Histone acetyltransferase p300 yes yes 1 0.024718 42.864 By matching By MS/MS 1 1 16262000 9670800 6591500 7327 2019 8368 18687;18688 18056 18056 3905 1 VYNLLTPDSK EEPKIDFRVYNLLTPD NLLTPDSKMGEPVSES R V Y S K M 0 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 1 0 1 1 0 0 10 0 1148.6077 E5RFF3;Q9UHF7;H0YC29;E5RJ97 E5RFF3 500 509 TRPS1 Zinc finger transcription factor Trps1 yes no 2 0.00062665 126.12 By MS/MS By MS/MS 1 1 8095100 3878800 4216300 7328 776 8369 18689;18690 18057;18058;18059 18057 7058 3 VYQVTEQQISEKLK TVLVVKDRVYQVTEQQ QQISEKLKTIMKENTE R V Y L K T 0 0 0 0 0 3 2 0 0 1 1 2 0 0 0 1 1 0 1 2 0 0 14 1 1691.9094 A0A0A0MRH6;Q5JRA6 A0A0A0MRH6 791 804 MIA3 Melanoma inhibitory activity protein 3 yes no 3 0.0020222 73.593 By MS/MS 1 3066800 3066800 0 7329 214 8370 18691 18060 18060 6890 1 VYTHEVVTLWYR RAFGIPIRVYTHEVVT EVVTLWYRSPEVLLGS R V Y Y R S 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 2 1 2 3 0 0 12 0 1564.8038 E5RIU6;A0A087WZZ9;P06493 E5RIU6 159 170 CDK1 Cyclin-dependent kinase 1 yes no 2;3 0.00030873 113.54 By MS/MS By MS/MS 2 3 34851000 17260000 17591000 7330 150 8371 18692;18693;18694;18695;18696 18061;18062;18063;18064;18065 18061 6868 5 VYTLSVSGDR GTFSQPEKVYTLSVSG TLSVSGDRLIVGTAGR K V Y D R L 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 2 1 0 1 2 0 0 10 0 1095.556 J3QT28;O43684 J3QT28 140 149 BUB3 Mitotic checkpoint protein BUB3 yes no 2 0.0073774 95.502 By MS/MS By MS/MS 1 1 5592400 3735100 1857300 7331 1363 8372 18697;18698 18066;18067 18067 2 VYTYIQSR SSCYEHQRVYTYIQSR VYTYIQSRFYRAPEVI R V Y S R F 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 2 1 0 0 8 0 1028.5291 Q92630;A0A0A0MTH5;Q9NR20 Q92630 379 386 DYRK2;DYRK4 Dual specificity tyrosine-phosphorylation-regulated kinase 2;Dual specificity tyrosine-phosphorylation-regulated kinase 4 yes no 2 0.01037 110.12 By MS/MS By MS/MS 1 1 6529400 3616200 2913200 7332 2593 8373 18699;18700 18068;18069;18070 18068 8411 3 VYVGNLGNNGNK DSCPLDCKVYVGNLGN NLGNNGNKTELERAFG K V Y N K T 0 0 4 0 0 0 0 3 0 0 1 1 0 0 0 0 0 0 1 2 0 0 12 0 1247.6258 A0A087X2D0;P84103 A0A087X2D0 12 23 SRSF3 Serine/arginine-rich splicing factor 3 yes no 2 0.031631 56.434 By matching By MS/MS 1 1 4740500 2142500 2598000 7333 175 8374 18701;18702 18071 18071 8 0 VYVGNLGNNGNKTELER DSCPLDCKVYVGNLGN GNKTELERAFGYYGPL K V Y E R A 0 1 4 0 0 0 2 3 0 0 2 1 0 0 0 0 1 0 1 2 0 0 17 1 1875.9439 A0A087X2D0;P84103 A0A087X2D0 12 28 SRSF3 Serine/arginine-rich splicing factor 3 yes no 3 0.0007633 80.102 By MS/MS 1 2780000 2780000 0 7334 175 8375 18703 18072;18073 18072 8 2 WADPQISESNFSPK VSVLAGPRWADPQISE SESNFSPKFNEKDGHV R W A P K F 1 0 1 1 0 1 1 0 0 1 0 1 0 1 2 3 0 1 0 0 0 0 14 0 1604.7471 D6RAW2;Q9BW91 D6RAW2 60 73 NUDT9 ADP-ribose pyrophosphatase, mitochondrial yes no 2 0.00098528 94.717 By MS/MS 1 3431300 3431300 0 7335 745 8376 18704 18074 18074 1345 1 WAHDKFSGEEGEIEDDESGTENR RKSSTSPKWAHDKFSG DESGTENREEKDNIQP K W A N R E 1 1 1 3 0 0 6 3 1 1 0 1 0 1 0 2 1 1 0 0 0 0 23 1 2636.0899 Q9Y2W1 Q9Y2W1 922 944 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 3.4435E-05 111.35 By MS/MS By MS/MS 2 3 149390000 91462000 57931000 7336 3096 8377;8378 18705;18706;18707;18708;18709 18075;18076;18077;18078;18079;18080 18075 6653;6654;7943 6 WAHDKFSGEEGEIEDDESGTENREEK RKSSTSPKWAHDKFSG GTENREEKDNIQPTTE K W A E K D 1 1 1 3 0 0 8 3 1 1 0 2 0 1 0 2 1 1 0 0 0 0 26 2 3022.27 Q9Y2W1 Q9Y2W1 922 947 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3;4 1.4925E-06 108.96 By MS/MS By MS/MS 4 4 347400000 234200000 113200000 7337 3096 8379 18710;18711;18712;18713;18714;18715;18716;18717 18081;18082;18083;18084;18085;18086 18081 6653;6654;7943 5 WCNVQSTQDEFEELTMSQK VVPEPVARWCNVQSTQ EELTMSQKNGGNVLQM R W C Q K N 0 0 1 1 1 3 3 0 0 0 1 1 1 1 0 2 2 1 0 1 0 0 19 0 2359.0097 D6RCP9;D6RFG8;P27707 D6RCP9 58 76 DCK Deoxycytidine kinase yes no 2;3 5.0454E-05 112.26 By MS/MS By MS/MS 3 3 51260000 21766000 29493000 7338 757 8380 18718;18719;18720;18721;18722;18723 18087;18088;18089;18090 18088 289 1365 4 WCPTTNKPVKSPTPTVNPR MKANPGYKWCPTTNKP PTPTVNPRKKLWAFPS K W C P R K 0 1 2 0 1 0 0 0 0 0 0 2 0 0 5 1 4 1 0 2 0 0 19 2 2179.1208 C9JA69;Q8WY36;C9JYU6;C9JZA0;C9J8D0 C9JA69 149 167 BBX HMG box transcription factor BBX yes no 3 0.0049966 70.167 By MS/MS By matching 1 1 63996000 34819000 29177000 7339 651 8381 18724;18725 18091 18091 1213 1 WDEQTSNTKGDDDEESDEEAVK RLMLHRIKWDEQTSNT ESDEEAVKKTNKCVLV K W D V K K 1 0 1 5 0 1 5 1 0 0 0 2 0 0 0 2 2 1 0 1 0 0 22 1 2526.0154 O43395 O43395 604 625 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 3 0.0036229 90.762 By MS/MS 1 0 0 0 7340 1498 8382 18726 18092 18092 2797 1 WDEQTSNTKGDDDEESDEEAVKK RLMLHRIKWDEQTSNT SDEEAVKKTNKCVLVW K W D K K T 1 0 1 5 0 1 5 1 0 0 0 3 0 0 0 2 2 1 0 1 0 0 23 2 2654.1104 O43395 O43395 604 626 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 3 0.00023945 85.397 By MS/MS By MS/MS 1 1 100270000 55391000 44879000 7341 1498 8383 18727;18728 18093;18094 18094 2797 2 WDETPASQMGGSTPVLTPGK GASKRKSRWDETPASQ TPVLTPGKTPIGTPAM R W D G K T 1 0 0 1 0 1 1 3 0 0 1 1 1 0 3 2 3 1 0 1 0 0 20 0 2057.9728 O75533 O75533 338 357 SF3B1 Splicing factor 3B subunit 1 yes yes 2 7.4723E-11 135.91 By MS/MS By MS/MS 1 1 38767000 18414000 20353000 7342 1549 8384 18729;18730 18095;18096 18096 560 2929 2 WDGSEEDEDNSK KAQKSNKKWDGSEEDE EEDEDNSKKIKERSRI K W D S K K 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 2 0 1 0 0 0 0 12 0 1409.5219 A0A087WUT6;O60841 A0A087WUT6 161 172 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0060717 88.101 By MS/MS By MS/MS 2 3 45931000 21544000 24387000 7343 60 8385 18731;18732;18733;18734;18735 18097;18098;18099 18097 109 2 WDKDDFESEEEDVK MIQVPQSKWDKDDFES ESEEEDVKSTQPISSV K W D V K S 0 0 0 4 0 0 4 0 0 0 0 2 0 1 0 1 0 1 0 1 0 0 14 1 1769.7268 Q7Z6E9 Q7Z6E9 1321 1334 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 2 2.2479E-20 157.73 By MS/MS By MS/MS 1 1 389640000 218450000 171180000 7344 2393 8386 18736;18737 18100;18101 18101 4879 2 WDSDNDEENEDVPISMK QDDSLELKWDSDNDEE EDVPISMKELKPLQRK K W D M K E 0 0 2 4 0 0 3 0 0 1 0 1 1 0 1 2 0 1 0 1 0 0 17 0 2021.816 F5H269;Q9Y485 F5H269 1968 1984 DMXL1 DmX-like protein 1 yes no 2 1.8095E-15 145.71 By MS/MS By MS/MS 2 2 36970000 20543000 16427000 7345 965 8387;8388 18738;18739;18740;18741 18102;18103;18104 18104 355 1818 3 WDTGENPIYK EKEKMNAKWDTGENPI TGENPIYKSAVTTVVN K W D Y K S 0 0 1 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 0 0 0 10 0 1221.5666 P05556 P05556 775 784 ITGB1 Integrin beta-1 yes yes 2 0.0050828 93.598 By MS/MS By MS/MS 1 1 239380000 122350000 117020000 7346 1644 8389 18742;18743 18105;18106 18105 8218 2 WDVSSFFQQIQRSSLSNNPLFQYK MLLDVLYRWDVSSFFQ NNPLFQYKYLALNMHY R W D Y K Y 0 1 2 1 0 4 0 0 0 1 2 1 0 3 1 5 0 1 1 1 0 0 24 1 2918.4351 Q96MT1 Q96MT1 29 52 RNF145 RING finger protein 145 yes yes 3 0.024513 42.309 By matching By MS/MS 1 1 33664000 21171000 12493000 7347 2686 8390 18744;18745 18107 18107 5544;5545 1 WEKLEGQGDVPTPK LKKPEAVRWEKLEGQG QGDVPTPKQFVADVKN R W E P K Q 0 0 0 1 0 1 2 2 0 0 1 2 0 0 2 0 1 1 0 1 0 0 14 1 1582.7991 Q9Y2Z0 Q9Y2Z0 254 267 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 3 0.0022322 80.459 By MS/MS 1 4061700 4061700 0 7348 3100 8391 18746 18108 18108 7944 1 WFHILGMMMFIWSSAHQYK KNLLMQARWFHILGMM WSSAHQYKCHVILGNL R W F Y K C 1 0 0 0 0 1 0 1 2 2 1 1 3 2 0 2 0 2 1 0 0 0 19 0 2412.137 Q9H8P0 Q9H8P0 201 219 SRD5A3 Polyprenol reductase yes yes 3 0.023082 41.912 By matching By MS/MS 1 1 17430000 9134700 8295000 7349 2856 8392 18747;18748 18109 18109 6020 1 WGDAGAEYVVESTGVFTTMEK ERDPSKIKWGDAGAEY GVFTTMEKAGAHLQGG K W G E K A 2 0 0 1 0 0 3 3 0 0 0 1 1 1 0 1 3 1 1 3 0 0 21 0 2276.0307 P04406;E7EUT5 P04406 87 107 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2;3 0.0013155 68.751 By MS/MS By MS/MS 2 1 21259000 16456000 4803300 7350 1635 8393 18749;18750;18751 18110;18111;18112;18113 18111 588 3 WGQPPSPTPVPRPPDADPNTPSPK VQKILIWKWGQPPSPT DPNTPSPKPLEGRPER K W G P K P 1 1 1 2 0 1 0 1 0 0 0 1 0 0 10 2 2 1 0 1 0 0 24 1 2534.2554 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 503 526 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.00034141 74.048 By MS/MS By MS/MS 1 1 51373000 27030000 24343000 7351 319 8394 18752;18753 18114;18115 18115 560 2 WKGQCYWGLSYMGTNMHSLQLTISR SRDPNTLRWKGQCYWG SLQLTISRRNGSETHT R W K S R R 0 1 1 0 1 2 0 3 1 1 3 1 2 0 0 3 2 2 2 0 0 0 25 1 3016.4146 P49441 P49441 215 239 INPP1 Inositol polyphosphate 1-phosphatase yes yes 3 0.029843 46.048 By MS/MS 1 0 0 0 7352 1853 8395 18754 18116 18116 718 1 WKSDLDSKVHLPNGSPIPAVLLANK STFEAVLKWKSDLDSK PAVLLANKCDQNKDSS K W K N K C 2 0 2 2 0 0 0 1 1 1 4 3 0 0 3 3 0 1 0 2 0 0 25 2 2698.4806 Q13637 Q13637 120 144 RAB32 Ras-related protein Rab-32 yes yes 3 0.027527 41.208 By MS/MS 1 17780000 17780000 0 7353 2075 8396 18755 18117 18117 4094 1 WLAESPVGLPPEEEDKLTR QKGLEVERWLAESPVG EEEDKLTRSPFEIISP R W L T R S 1 1 0 1 0 0 4 1 0 0 3 1 0 0 3 1 1 1 0 1 0 0 19 1 2165.1004 E9PGC8;P78559 E9PGC8 2010 2028 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 3 0.021306 54.953 By MS/MS By matching 1 1 15353000 8097700 7255200 7354 872 8397 18756;18757 18118 18118 1615 0 WLDDLLASPPPSGGGAR PGPESSSRWLDDLLAS PPSGGGARRGAGAELK R W L A R R 2 1 0 2 0 0 0 3 0 0 3 0 0 0 3 2 0 1 0 0 0 0 17 0 1707.858 Q9C0C2 Q9C0C2 684 700 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.00037402 103.75 By MS/MS By MS/MS 1 1 57670000 33432000 24237000 7355 2791 8398 18758;18759 18119;18120 18119 5829 2 WLDESDAEMELR FLAPDFDRWLDESDAE SDAEMELRAKEEERLN R W L L R A 1 1 0 2 0 0 3 0 0 0 2 0 1 0 0 1 0 1 0 0 0 0 12 0 1492.6504 H3BPZ1;H3BS72;Q9P035 H3BPZ1 85 96 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 2;3 6.4136E-11 147.52 By MS/MS By MS/MS 7 8 5390600000 2891600000 2499000000 7356 1241 8399;8400 18760;18761;18762;18763;18764;18765;18766;18767;18768;18769;18770;18771;18772;18773;18774 18121;18122;18123;18124;18125;18126;18127;18128;18129;18130;18131;18132;18133;18134;18135 18133 448 2318 15 WLDGASFDNER VLRLRERRWLDGASFD GASFDNERGSTSKEGE R W L E R G 1 1 1 2 0 0 1 1 0 0 1 0 0 1 0 1 0 1 0 0 0 0 11 0 1308.5735 E7EMW7;O95071 E7EMW7 316 326 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.0029852 86.467 By MS/MS By MS/MS 1 1 97749000 63424000 34325000 7357 793 8401 18775;18776 18136;18137 18136 1415 2 WLEEADSSSGSPTSIDK KLKPLLNKWLEEADSS GSPTSIDKIAAQGRKR K W L D K I 1 0 0 2 0 0 2 1 0 1 1 1 0 0 1 5 1 1 0 0 0 0 17 0 1807.8112 P20265 P20265 331 347 POU3F2 POU domain, class 3, transcription factor 2 yes yes 2 1.2556E-23 162.15 By MS/MS By MS/MS 1 1 44878000 24715000 20163000 7358 1736 8402 18777;18778 18138;18139 18138 3272 2 WLIGPFTYATTYTRTEIWMTAFENDPK W L P K 2 1 1 1 0 0 2 1 0 2 1 1 1 2 2 0 6 2 2 0 0 0 27 1 3251.5638 REV__Q9H7D0 yes yes 3 0.032356 47.648 By MS/MS 1 1587200 0 1587200 + 7359 3224 8403 18779 18140 18140 0 WLKSPTTPIDPEK SMENPQAKWLKSPTTP TTPIDPEKQWNLASPS K W L E K Q 0 0 0 1 0 0 1 0 0 1 1 2 0 0 3 1 2 1 0 0 0 0 13 1 1510.8031 Q08AD1 Q08AD1 859 871 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 0.0031804 88.78 By MS/MS By MS/MS 1 1 11367000 5848700 5518300 7360 2017 8404 18780;18781 18141;18142;18143 18142 3900 3 WLMQVNFVSYVQLTSR ARSPQATRWLMQVNFV SYVQLTSRALPSLTDS R W L S R A 0 1 1 0 0 2 0 0 0 0 2 0 1 1 0 2 1 1 1 3 0 0 16 0 1970.0084 J3KTC8;A0A087WWR3;Q7Z5J1 J3KTC8 45 60 HSD11B1L Hydroxysteroid 11-beta-dehydrogenase 1-like protein yes no 2 0.026595 54.471 By MS/MS 1 0 0 0 7361 96 8405 18782 18144 18144 35 175 1 WLNDAENLSSDSSLSSPSALNSPGIEGLSR KLKPLLEKWLNDAENL PGIEGLSRRRKKRTSI K W L S R R 2 1 3 2 0 0 2 2 0 1 5 0 0 0 2 9 0 1 0 0 0 0 30 0 3102.4742 A0A0C4DG88;P14859;A0A0A0MT46 A0A0C4DG88 257 286 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 3 0.00022386 63.932 By MS/MS 1 18924000 0 18924000 7362 309 8406 18783 18145 18145 542 1 WLNSGRGDEASEEGQNGSSPK KQQREKTRWLNSGRGD GQNGSSPKSKTKWTKE R W L P K S 1 1 2 1 0 1 3 4 0 0 1 1 0 0 1 4 0 1 0 0 0 0 21 1 2203.973 P35611;E7EV99;E7ENY0;H0Y9H2 P35611 447 467 ADD1 Alpha-adducin yes no 2;3 0.00013551 107.18 By MS/MS By MS/MS 3 3 114130000 61852000 52274000 7363 1799 8407;8408 18784;18785;18786;18787;18788;18789 18146;18147;18148;18149 18147 82;155 3397;3398 4 WLNSPNTYMK RQQREKTRWLNSPNTY NSPNTYMKVNVPEESR R W L M K V 0 0 2 0 0 0 0 0 0 0 1 1 1 0 1 1 1 1 1 0 0 0 10 0 1252.591 Q9UEY8 Q9UEY8 439 448 ADD3 Gamma-adducin yes yes 2 0.0073016 65.465 By matching By MS/MS 1 1 10157000 5609800 4546800 7364 2998 8409 18790;18791 18150 18150 1190 8489 1 WLPSSPSGVAK EADHLSSKWLPSSPSG SSPSGVAKAKMFKLDT K W L A K A 1 0 0 0 0 0 0 1 0 0 1 1 0 0 2 3 0 1 0 1 0 0 11 0 1127.5975 Q8IWI9;H3BP52;H3BTF4 Q8IWI9 445 455 MGA MAX gene-associated protein yes no 2 0.0021258 89.356 By MS/MS By MS/MS 1 1 54746000 31080000 23666000 7365 2429 8410 18792;18793 18151;18152;18153 18151 4969 3 WLSTSIPEAQWHSSLAR EPKPRSARWLSTSIPE QWHSSLARTSSAEYNV R W L A R T 2 1 0 0 0 1 1 0 1 1 2 0 0 0 1 4 1 2 0 0 0 0 17 0 1967.9854 A0A0U1RQF0;P49327 A0A0U1RQF0 712 728 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 3 0.0011298 75.911 By MS/MS By MS/MS 1 1 13188000 7656400 5531600 7366 381 8411 18794;18795 18154;18155;18156 18154 704;705 3 WMEEQAQSLIDK NVKDYYQKWMEEQAQS QAQSLIDKTTAAFQQG K W M D K T 1 0 0 1 0 2 2 0 0 1 1 1 1 0 0 1 0 1 0 0 0 0 12 0 1476.6919 A0A0A0MRR7;P09234 A0A0A0MRR7 62 73 SNRPC U1 small nuclear ribonucleoprotein C yes no 2 0.017208 76.332 By MS/MS By matching 1 1 7260600 3169200 4091400 7367 228 8412 18796;18797 18157 18157 1 WMEPAIPVFSFSK RDYPQVPKWMEPAIPV IPVFSFSKARLWKIGK K W M S K A 1 0 0 0 0 0 1 0 0 1 0 1 1 2 2 2 0 1 0 1 0 0 13 0 1537.7639 F8WEW4;B4DVA9;H7C5H0;Q8NBL1 F8WEW4 140 152 POGLUT1 Protein O-glucosyltransferase 1 yes no 3 0.026443 51.013 By MS/MS 1 0 0 0 7368 566 8413 18798 18158 18158 227 1046;1047 1 WMKEQTGSICQYLVMR PDVPEDIRWMKEQTGS ICQYLVMRAKRKLGRH R W M M R A 0 1 0 0 1 2 1 1 0 1 1 1 2 0 0 1 1 1 1 1 0 0 16 1 2028.9584 Q96AD5 Q96AD5 365 380 PNPLA2 Patatin-like phospholipase domain-containing protein 2 yes yes 2 0.030519 45.14 By MS/MS 1 0 0 0 7369 2619 8414 18799 18159 18159 1051 1 WNTIPLR VRFFVDKKWNTIPLRN KWNTIPLRNKSLQRIC K W N L R N 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 0 1 1 0 0 0 0 7 0 898.50249 H0YN99;Q9H792;H3BUZ5 H0YN99 291 297 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.030298 59.931 By matching By MS/MS 1 1 13772000 9126400 4645300 7370 1218 8415 18800;18801 18160 18160 0 WPFSGKTSPPCSPANLSR RSPSPSFRWPFSGKTS CSPANLSRHKAAAYDI R W P S R H 1 1 1 0 1 0 0 1 0 0 1 1 0 1 4 4 1 1 0 0 0 0 18 1 1987.9574 P49585;C9JEJ2 P49585 336 353 PCYT1A Choline-phosphate cytidylyltransferase A yes no 2;3 0.0034511 83.404 By MS/MS By MS/MS 2 2 75931000 34304000 41626000 7371 1856 8416 18802;18803;18804;18805 18161;18162;18163 18161 3575;3576;3577 3 WPTVDASYYGGR DDGLPKKKWPTVDASY DASYYGGRGVGGIKRM K W P G R G 1 1 0 1 0 0 0 2 0 0 0 0 0 0 1 1 1 1 2 1 0 0 12 0 1370.6255 Q9H6X2;J3KPY9;P58335 Q9H6X2 375 386 ANTXR1;ANTXR2 Anthrax toxin receptor 1;Anthrax toxin receptor 2 yes no 2 0.0014419 92.19 By MS/MS By MS/MS 1 1 10513000 5745900 4766800 7372 2845 8417 18806;18807 18164;18165 18165 5986;8463;8464 2 WQLSSPDGVDTDDDLPK RTLTFAERWQLSSPDG DTDDDLPKSRASKRTC R W Q P K S 0 0 0 5 0 1 0 1 0 0 2 1 0 0 2 2 1 1 0 1 0 0 17 0 1886.8534 Q8NG08 Q8NG08 1017 1033 HELB DNA helicase B yes yes 2 4.26E-05 124.04 By matching By MS/MS 1 1 13865000 7721100 6143900 7373 2520 8418 18808;18809 18166 18166 5148 1 WQSPVTK PRMQMGKRWQSPVTKS RWQSPVTKSGRRRRSP R W Q T K S 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 1 1 1 0 1 0 0 7 0 844.4443 A9Z1X7;M0R088 A9Z1X7 545 551 SRRM1 yes no 2 0.025921 90.601 By MS/MS 1 85929000 0 85929000 7374 511 8419 18810 18167 18167 969 1 WRPHSPDGPR GSRRDGERWRPHSPDG PHSPDGPRSAGWREHM R W R P R S 0 2 0 1 0 0 0 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 10 1 1203.5897 I1E4Y6;Q6Y7W6;C9JH78;C9IYH5 I1E4Y6 254 263 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 3 0.0079628 61.423 By MS/MS By MS/MS 1 1 117080000 56302000 60783000 7375 1298 8420 18811;18812 18168;18169 18168 2412 2 WSIVSSPER ENDVLHKRWSIVSSPE SIVSSPEREITLVNLK R W S E R E 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 3 0 1 0 1 0 0 9 0 1059.5349 Q12923 Q12923 1081 1089 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.0092988 79.036 By MS/MS By MS/MS 1 1 15056000 7815700 7240600 7376 2034 8421 18813;18814 18170;18171 18171 3985;3986 2 WSTELVPEGLQSPR ISPSEDRRWSTELVPE PEGLQSPRGTPDSESS R W S P R G 0 1 0 0 0 1 2 1 0 0 2 0 0 0 2 2 1 1 0 1 0 0 14 0 1597.81 H3BMM1;H3BV44;H3BRD5;B2RTY4 H3BMM1 926 939 MYO9A Unconventional myosin-IXa yes no 2 0.012257 70.197 By matching By MS/MS 1 1 17348000 8370400 8978000 7377 535 8422 18815;18816 18172 18172 1010 1 WTKPSSFSDSER GEDMLVWRWTKPSSFS SSFSDSER________ R W T E R - 0 1 0 1 0 0 1 0 0 0 0 1 0 1 1 4 1 1 0 0 0 0 12 1 1425.6525 Q8NC56;H0Y9B7 Q8NC56 492 503 LEMD2 LEM domain-containing protein 2 yes no 2;3 0.00048497 91.969 By MS/MS By MS/MS 2 2 102470000 57389000 45078000 7378 2500 8423 18817;18818;18819;18820 18173;18174;18175 18175 5103;5104 3 WTPKSPLDPDSGLLSCTLPNGFGGQSGPEGER PMEEDGLRWTPKSPLD QSGPEGERSLAPPDAS R W T E R S 0 1 1 2 1 1 2 6 0 0 4 1 0 1 5 4 2 1 0 0 0 0 32 1 3355.5779 A0A087X0R7;Q9H4L4 A0A087X0R7 158 189 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 2.8044E-06 75.343 By MS/MS 1 76738000 0 76738000 7379 161 8424 18821 18176;18177 18177 264 2 WVEENVPSSVTDVALPALLDSDEER KAQEDDLKWVEENVPS LLDSDEERMITHFERS K W V E R M 2 1 1 3 0 0 4 0 0 0 3 0 0 0 2 3 1 1 0 4 0 0 25 0 2769.3345 Q8NBN3 Q8NBN3 520 544 TMEM87A Transmembrane protein 87A yes yes 2;3 6.072E-07 113.52 By MS/MS By MS/MS 2 2 77124000 39410000 37714000 7380 2496 8425 18822;18823;18824;18825 18178;18179;18180 18179 5093 3 WVSELSYVEEK MQRQENLRWVSELSYV ELSYVEEKEQWQEQIN R W V E K E 0 0 0 0 0 0 3 0 0 0 1 1 0 0 0 2 0 1 1 2 0 0 11 0 1367.6609 A6NNN6;E7ETA6;Q15154 A6NNN6 987 997 PCM1 Pericentriolar material 1 protein yes no 2 0.00012713 117.79 By MS/MS By MS/MS 1 1 5866000 3700300 2165800 7381 484 8426 18826;18827 18181;18182 18181 881 2 YAALSDQGLDIK KVRPSASRYAALSDQG SDQGLDIKAAFQPEAN R Y A I K A 2 0 0 2 0 1 0 1 0 1 2 1 0 0 0 1 0 0 1 0 0 0 12 0 1292.6612 Q8WX93 Q8WX93 1348 1359 PALLD Palladin yes yes 2 7.7263E-06 125.75 By MS/MS By MS/MS 1 1 10069000 5574600 4494000 7382 2566 8427 18828;18829 18183;18184 18184 8406 2 YACGLWGLSPASR MGKSVPGKYACGLWGL WGLSPASRKRYDAATT K Y A S R K 2 1 0 0 1 0 0 2 0 0 2 0 0 0 1 2 0 1 1 0 0 0 13 0 1436.6871 H7C0N4;H7C561 H7C0N4 24 36 SF1 yes no 2 0.00060263 114.31 By MS/MS By MS/MS 1 1 12087000 6692100 5394700 7383 1270 8428 18830;18831 18185;18186 18186 2356 2 YADAQLSCQGRGGTLSMPK LLVKEEKRYADAQLSC GGTLSMPKDEAANGLM R Y A P K D 2 1 0 1 1 2 0 3 0 0 2 1 1 0 1 2 1 0 1 0 0 0 19 1 2038.9564 Q9BWP8 Q9BWP8 163 181 COLEC11 Collectin-11 yes yes 2 0.030836 48.277 By MS/MS 1 0 0 0 7384 2767 8429 18832 18187 18187 1101 1 YADLPGIAR ________________ ADLPGIARNEPDVYET K Y A A R N 2 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 9 0 974.51853 F8W0U6;F8VRV7;F8VW18;F8W1I6;Q13561 F8W0U6 6 14 DCTN2 Dynactin subunit 2 yes no 2 0.0079601 101.33 By MS/MS By MS/MS 1 1 65048000 33927000 31122000 7385 1007 8430 18833;18834 18188;18189 18189 8138 2 YADLTEDQLPSCESLK SNISKDRRYADLTEDQ LPSCESLKDTIARALP R Y A L K D 1 0 0 2 1 1 2 0 0 0 3 1 0 0 1 2 1 0 1 0 0 0 16 0 1867.851 P18669 P18669 142 157 PGAM1 Phosphoglycerate mutase 1 yes yes 2 0.00077687 108.72 By matching By MS/MS 1 1 8473900 3106600 5367400 7386 1728 8431 18835;18836 18190 18190 1 YAGDWSSCGENYFLNTKENLNDVDYDDVPSEDRK LDSPLSNRYAGDWSSC DVPSEDRKIGENYSKM R Y A R K I 1 1 4 6 1 0 3 2 0 0 2 2 0 1 1 3 1 1 3 2 0 0 34 2 4014.7126 Q5VT97 Q5VT97 1088 1121 SYDE2 Rho GTPase-activating protein SYDE2 yes yes 3 0.030898 42.59 By MS/MS 1 0 0 0 7387 2265 8432 18837 18191 18191 1 YATPQVIQAPGPR QSFASDPKYATPQVIQ VIQAPGPRAGPCILPI K Y A P R A 2 1 0 0 0 2 0 1 0 1 0 0 0 0 3 0 1 0 1 1 0 0 13 0 1396.7463 H0Y5H7;C9J1X3;Q07912 H0Y5H7 394 406 TNK2 Activated CDC42 kinase 1 yes no 2 0.0021035 93.556 By matching By MS/MS 1 1 25325000 13591000 11734000 7388 627 8433 18838;18839 18192 18192 8087 1 YCSGLGAGTAQDPCPVSQLEK DPRRTEPRYCSGLGAG CPVSQLEKRPRVSEAS R Y C E K R 2 0 0 1 2 2 1 3 0 0 2 1 0 0 2 2 1 0 1 1 0 0 21 0 2237.0093 A0A0C4DH65;A5PL33 A0A0C4DH65 743 763 KRBA1 Protein KRBA1 yes no 3 0.028235 41.485 By MS/MS By matching 1 1 83965000 45490000 38475000 7389 332 8434 18840;18841 18193 18193 0 YDEEGGGEEDQDYDLSQLQQPDTVEPDAIKPVGIR DVRDNILKYDEEGGGE AIKPVGIRRMDERPIH K Y D I R R 1 1 0 6 0 4 5 4 0 2 2 1 0 0 3 1 1 0 2 2 0 0 35 1 3904.7763 P19022 P19022 773 807 CDH2 Cadherin-2 yes yes 3 0.016927 41.483 By matching By MS/MS 1 1 20238000 10162000 10076000 7390 1730 8435 18842;18843 18194 18194 3260 1 YDERPGPSPLPHR SGRDDTSRYDERPGPS GPSPLPHRDRDRDRER R Y D H R D 0 2 0 1 0 0 1 1 1 0 1 0 0 0 4 1 0 0 1 0 0 0 13 1 1519.7532 P08621 P08621 219 231 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 3 0.0016932 80.488 By MS/MS By MS/MS 1 1 150190000 81623000 68566000 7391 1661 8436 18844;18845 18195;18196;18197;18198 18198 3131 4 YDGIILPGK AMRWFQQKYDGIILPG DGIILPGK________ K Y D G K - 0 0 0 1 0 0 0 2 0 2 1 1 0 0 1 0 0 0 1 0 0 0 9 0 974.54368 P62913 P62913 170 178 RPL11 60S ribosomal protein L11 yes yes 2 0.0099335 98.629 By MS/MS By MS/MS 1 1 10657000 4576400 6081100 7392 1949 8437 18846;18847 18199;18200 18200 2 YDLLYQDI IDPKNIPKYDLLYQDI YDLLYQDI________ K Y D D I - 0 0 0 2 0 1 0 0 0 1 2 0 0 0 0 0 0 0 2 0 0 0 8 0 1041.5019 Q9NX01 Q9NX01 142 149 TXNL4B Thioredoxin-like protein 4B yes yes 2 1.4024E-13 150.02 By MS/MS 1 0 0 0 7393 2938 8438 18848 18201 18201 8479 1 YDSCCVIDKITRNQCQLCR LHPTYSCKYDSCCVID RNQCQLCRFKKCIAVG K Y D C R F 0 2 1 2 4 2 0 0 0 2 1 1 0 0 0 1 1 0 1 1 0 0 19 2 2488.108 P10827 P10827 93 111 THRA Thyroid hormone receptor alpha yes yes 2 0.028272 43.024 By MS/MS 1 14519000 0 14519000 7394 1678 8439 18849 18202 18202 3164 1 YDSDGDKSDDLVVDVSNEDPATPR EEKDSLSRYDSDGDKS NEDPATPRVSPAHSPP R Y D P R V 1 1 1 7 0 0 1 1 0 0 1 1 0 0 2 3 1 0 1 3 0 0 24 1 2608.1413 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 238 261 TLE3 Transducin-like enhancer protein 3 yes no 3 0.002966 62.255 By MS/MS By MS/MS 2 3 47214000 23054000 24160000 7395 986 8440;8441 18850;18851;18852;18853;18854 18203;18204;18205;18206;18207 18204 1853;1854;8137 5 YEAMTKLGFKAILPSFMR VYVYMKRKYEAMTKLG AILPSFMRNKRVTDFQ K Y E M R N 2 1 0 0 0 0 1 1 0 1 2 2 2 2 1 1 1 0 1 0 0 0 18 2 2102.1057 A0A087WWQ6;Q99909 A0A087WWQ6 55 72 SSX3 Protein SSX3 yes no 2 0.032118 40.676 By MS/MS 1 0 0 0 7396 95 8442 18855 18208 18208 34 1 YEAPQATDGLAGALDAR ADQRKEVKYEAPQATD LAGALDARQQSTGAIP K Y E A R Q 5 1 0 2 0 1 1 2 0 0 2 0 0 0 1 0 1 0 1 0 0 0 17 0 1717.8271 O60784 O60784 386 402 TOM1 Target of Myb protein 1 yes yes 2;3 4.2785E-06 126.71 By MS/MS By MS/MS 2 2 37752000 19579000 18173000 7397 1527 8443 18856;18857;18858;18859 18209;18210;18211 18209 8202 3 YEAVSPERLELER HHSTCEARYEAVSPER PERLELERQHTFALHQ R Y E E R Q 1 2 0 0 0 0 4 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 13 1 1589.8049 Q92585 Q92585 41 53 MAML1 Mastermind-like protein 1 yes yes 3 0.020838 52.247 By matching By MS/MS 1 1 12877000 5885900 6991500 7398 2586 8444 18860;18861 18212 18212 5315 1 YEDDGISDDEIEGK ________________ SDDEIEGKRTFDLEEK R Y E G K R 0 0 0 4 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 0 0 0 14 0 1583.6475 I3VM54;Q9Y2K7 I3VM54 5 18 KDM2A Lysine-specific demethylase 2A yes no 2 0.0012753 107.69 By MS/MS By matching 1 1 12089000 5701600 6387500 7399 1315 8445 18862;18863 18213;18214;18215 18214 2441 3 YEDKPEPEVDALGSPPALLK ELSPAASKYEDKPEPE GSPPALLKSNISWILP K Y E L K S 2 0 0 2 0 0 3 1 0 0 3 2 0 0 4 1 0 0 1 1 0 0 20 1 2167.1049 Q68DQ2 Q68DQ2 918 937 CRYBG3 Very large A-kinase anchor protein yes yes 3 0.0019965 67.396 By matching By MS/MS 1 1 13997000 2492800 11505000 7400 2296 8446 18864;18865 18216 18216 4621 1 YEPQSPGYEPR EFESQSPRYEPQSPGY QSPGYEPRSPGYEPRS R Y E P R S 0 1 0 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 2 0 0 0 11 0 1321.5939 Q9H5H4;H3BS42 Q9H5H4 121 131 ZNF768 Zinc finger protein 768 yes no 2 0.00013486 117.27 By MS/MS By MS/MS 1 1 196760000 97019000 99737000 7401 2838 8447 18866;18867 18217;18218;18219;18220 18220 5967 4 YESLTDPSKLDSGK SDALDKIRYESLTDPS PSKLDSGKELKIDIIP R Y E G K E 0 0 0 2 0 0 1 1 0 0 2 2 0 0 1 3 1 0 1 0 0 0 14 1 1538.7464 P07900;G3V2J8;P08238;Q58FF8;Q58FF7 P08238 56 69 HSP90AA1;HSP90AB1;HSP90AB2P;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Putative heat shock protein HSP 90-beta-3 no no 3 0.0071498 79.886 By MS/MS By MS/MS 1 1 12208000 5283700 6924400 7402 1658;1656 8448 18868;18869 18221;18222 18222 2 YESQEPLAGQESPLPLATR PLQQAEERYESQEPLA SPLPLATREAALPILE R Y E T R E 2 1 0 0 0 2 3 1 0 0 3 0 0 0 3 2 1 0 1 0 0 0 19 0 2085.0378 Q9C0C2 Q9C0C2 590 608 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2;3 2.0085E-118 222.13 By MS/MS By MS/MS 2 2 200060000 114810000 85249000 7403 2791 8449 18870;18871;18872;18873 18223;18224;18225 18223 5830 3 YESQLSTNEEKVDTDDR EIKKQLSKYESQLSTN EKVDTDDRTEGYLRAD K Y E D R T 0 1 1 3 0 1 3 0 0 0 1 1 0 0 0 2 2 0 1 1 0 0 17 1 2027.892 K7EQ91;Q13433 K7EQ91 40 56 SLC39A6 Zinc transporter ZIP6 yes no 2;3 0.0046924 79.837 By MS/MS By MS/MS 2 2 22622000 11565000 11057000 7404 1389 8450 18874;18875;18876;18877 18226;18227;18228 18227 2557;2558 3 YETPSDAIEVISPASSPAPPQEK SSSLSSHRYETPSDAI SPAPPQEKLQTYQPEV R Y E E K L 3 0 0 1 0 1 3 0 0 2 0 1 0 0 5 4 1 0 1 1 0 0 23 0 2412.1697 A0A088AWL3;O75376;E7EVK1 A0A088AWL3 1870 1892 NCOR1 Nuclear receptor corepressor 1 yes no 3 0.00052525 88 By matching By MS/MS 1 1 15108000 6656600 8451600 7405 177 8451 18878;18879 18229 18229 294;295 1 YEYDPDISPPR LSFPKNSKYEYDPDIS DPDISPPRKKQAKSHF K Y E P R K 0 1 0 2 0 0 1 0 0 1 0 0 0 0 3 1 0 0 2 0 0 0 11 0 1350.6092 Q9BRD0;H7C462 Q9BRD0 318 328 BUD13 BUD13 homolog yes no 2 0.0029022 101.46 By MS/MS By MS/MS 1 1 25727000 12754000 12973000 7406 2742 8452 18880;18881 18230;18231;18232 18232 5696;8447 3 YFDNKDDDSDTETSNDLPK SMRQPDLKYFDNKDDD ETSNDLPKFADGIKAR K Y F P K F 0 0 2 6 0 0 1 0 0 0 1 2 0 1 1 2 2 0 1 0 0 0 19 1 2217.9186 C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6 C9J3R1 52 70 ZNF639 Zinc finger protein 639 yes no 3 0.0001367 102.36 By MS/MS By MS/MS 1 1 22613000 12970000 9643300 7407 619 8453 18882;18883 18233;18234 18233 1142;7009 2 YFEADPPGQVAASPDPTT EVEALLDRYFEADPPG AASPDPTT________ R Y F T T - 3 0 0 2 0 1 1 1 0 0 0 0 0 1 4 1 2 0 1 1 0 0 18 0 1861.837 H0Y8X4;O43598 H0Y8X4 226 243 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 yes no 2 0.0001758 102.84 By MS/MS By MS/MS 1 1 72875000 38843000 34032000 7408 1149 8454 18884;18885 18235;18236;18237;18238 18238 2185 4 YFQISQDEDESESED DKETYELRYFQISQDE EDESESED________ R Y F E D - 0 0 0 3 0 2 4 0 0 1 0 0 0 1 0 3 0 0 1 0 0 0 15 0 1819.6908 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 107 121 RPL22L1 60S ribosomal protein L22-like 1 yes no 2 2.7777E-40 170.42 By MS/MS By MS/MS 2 6 0 0 0 7409 703 8455 18886;18887;18888;18889;18890;18891;18892;18893 18239;18240;18241;18242;18243;18244;18245;18246 18245 1300 8 YFQSPSR SGSIKGSRYFQSPSRS RYFQSPSRSRSRSRSI R Y F S R S 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 2 0 0 1 0 0 0 7 0 883.41882 Q16629;H7BZZ6 Q16629 189 195 SRSF7 Serine/arginine-rich splicing factor 7 yes no 2 0.026902 72.243 By matching By MS/MS 2 2 40606000 22147000 18458000 7410 2165 8456;8457 18894;18895;18896;18897 18247;18248 18248 4308;4309 1 YFSLKPEEK ELIAAEKKYFSLKPEE FSLKPEEKDEKSTLEQ K Y F E K D 0 0 0 0 0 0 2 0 0 0 1 2 0 1 1 1 0 0 1 0 0 0 9 1 1139.5863 Q9Y5K6 Q9Y5K6 361 369 CD2AP CD2-associated protein yes yes 2 4.519E-06 106.68 By MS/MS By MS/MS 1 1 5312800 2832700 2480100 7411 3130 8458 18898;18899 18249;18250 18249 8511 0 YGAFVKPAVVTVGDFPEEDYGLDEI RYFECQAKYGAFVKPA EDYGLDEI________ K Y G E I - 2 0 0 3 0 0 3 3 0 1 1 1 0 2 2 0 1 0 2 4 0 0 25 1 2729.3112 Q99426 Q99426 220 244 TBCB Tubulin-folding cofactor B yes yes 2 0.00098143 67.648 By MS/MS By MS/MS 1 1 36103000 15649000 20454000 7412 2719 8459 18900;18901 18251;18252 18252 8436 2 YGEPGEVFINK EFKRLFAKYGEPGEVF PGEVFINKGKGFGFIK K Y G N K G 0 0 1 0 0 0 2 2 0 1 0 1 0 1 1 0 0 0 1 1 0 0 11 0 1251.6136 P23246 P23246 320 330 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.0060558 86.882 By MS/MS By MS/MS 1 1 16317000 6648600 9668700 7413 1753 8460 18902;18903 18253;18254 18253 2 YGGSPRDPVLTLR AEASHVSRYGGSPRDP RDPVLTLRAFAGPLSP R Y G L R A 0 2 0 1 0 0 0 2 0 0 2 0 0 0 2 1 1 0 1 1 0 0 13 1 1429.7678 Q86XL3 Q86XL3 509 521 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 3 0.028131 59.513 By MS/MS 1 0 0 0 7414 2418 8461 18904 18255 18255 4937 1 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR DKAERAKKYGGSVGSQ SQEPPTKREYDQCRIQ K Y G K R E 1 1 0 0 0 2 2 4 0 0 0 1 0 0 10 5 1 0 1 3 0 0 31 1 3082.536 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323 E9PS08 37 67 UBXN1 UBX domain-containing protein 1 yes no 3 3.0102E-15 133.45 By MS/MS By MS/MS 1 1 98608000 50866000 47742000 7415 48 8462 18905;18906 18256;18257;18258;18259;18260 18257 88;89 5 YGLFKEENPYAR RHDEIRKKYGLFKEEN KEENPYARFENN____ K Y G A R F 1 1 1 0 0 0 2 1 0 0 1 1 0 1 1 0 0 0 2 0 0 0 12 1 1485.7252 A8MXQ1;P53801 A8MXQ1 144 155 PTTG1IP Pituitary tumor-transforming gene 1 protein-interacting protein yes no 2;3 6.0641E-05 120.63 By MS/MS By MS/MS 2 2 71692000 39161000 32531000 7416 504 8463 18907;18908;18909;18910 18261;18262;18263 18261 8059 3 YGLQDSDEEEEEHPSK FKVSHFSKYGLQDSDE EEEEHPSKTSTKKLKT K Y G S K T 0 0 0 2 0 1 5 1 1 0 1 1 0 0 1 2 0 0 1 0 0 0 16 0 1890.7755 P52948 P52948 883 898 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 2;3 1.825E-22 154.51 By MS/MS By MS/MS 2 2 402270000 214620000 187660000 7417 1893 8464 18911;18912;18913;18914 18264;18265;18266;18267 18264 3668 4 YGMGTSVER IFICENNRYGMGTSVE GMGTSVERAAASTDYY R Y G E R A 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 1 1 0 1 1 0 0 9 0 998.44913 P08559 P08559 227 235 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.0065049 79.07 By MS/MS By MS/MS 1 1 56789000 31817000 24973000 7418 1659 8465 18915;18916 18268;18269;18270;18271 18271 610 7379 4 YGRPNLQSSK Y G S K 0 1 1 0 0 1 0 1 0 0 1 1 0 0 1 2 0 0 1 0 0 0 10 1 1148.5938 REV__A0A0U1RR91 yes yes 2 0.0065321 67.494 By MS/MS 1 12897000 12897000 0 + 7419 3167 8466 18917 18272 18272 1 YGSFEEAEASYPILNR GRDSGMEKYGSFEEAE ASYPILNRAREGDSHK K Y G N R A 2 1 1 0 0 0 3 1 0 1 1 0 0 1 1 2 0 0 2 0 0 0 16 0 1844.8581 O95425 O95425 966 981 SVIL Supervillin yes yes 2 1.3159E-15 148.18 By MS/MS By MS/MS 1 1 24780000 13867000 10913000 7420 1596 8467 18918;18919 18273;18274;18275 18273 3026 3 YGSIVDDER LPSLQRPRYGSIVDDE GSIVDDERLSAEEMDE R Y G E R L 0 1 0 2 0 0 1 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 9 0 1052.4775 Q13576 Q13576 14 22 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes yes 2 0.0040719 89.805 By MS/MS By matching 1 1 123060000 38732000 84331000 7421 2067 8468 18920;18921 18276 18276 4081 1 YGSKMVSNPCMTSATIDVTTVER CRSTEDLRYGSKMVSN IDVTTVERLSQTYLYR R Y G E R L 1 1 1 1 1 0 1 1 0 1 0 1 2 0 1 3 4 0 1 3 0 0 23 1 2546.1815 Q9H158 Q9H158 727 749 PCDHAC1 Protocadherin alpha-C1 yes yes 2 0.030176 44.925 By MS/MS 1 12438000 0 12438000 7422 2811 8469 18922 18277 18277 1112 1 YGSPPQRDPNWNGER PRRIRKPRYGSPPQRD DPNWNGERLNKSHRHQ R Y G E R L 0 2 2 1 0 1 1 2 0 0 0 0 0 0 3 1 0 1 1 0 0 0 15 1 1771.8026 O15234;J3KSY7 O15234 263 277 CASC3 Protein CASC3 yes no 3 0.0092669 60.09 By MS/MS By MS/MS 1 1 32517000 17661000 14856000 7423 1477 8470 18923;18924 18278;18279 18279 2764 2 YGSRDDLVAGPGFGGAR GPRGPALRYGSRDDLV GPGFGGARNPALQTSL R Y G A R N 2 2 0 2 0 0 0 5 0 0 1 0 0 1 1 1 0 0 1 1 0 0 17 1 1693.8172 Q9ULC8 Q9ULC8 604 620 ZDHHC8 Probable palmitoyltransferase ZDHHC8 yes yes 3 0.00055079 88.133 By MS/MS By MS/MS 1 1 8186300 4839200 3347100 7424 3037 8471 18925;18926 18280;18281 18280 6392 2 YGVYEDENYEVGSDDEEIPFK ERELDEGRYGVYEDEN DDEEIPFKCFICRQSF R Y G F K C 0 0 1 3 0 0 5 2 0 1 0 1 0 1 1 1 0 0 3 2 0 0 21 0 2496.0493 O15541 O15541 241 261 RNF113A RING finger protein 113A yes yes 2;3 5.7868E-47 179.69 By MS/MS By MS/MS 2 2 130140000 61005000 69139000 7425 1485 8472 18927;18928;18929;18930 18282;18283;18284;18285;18286;18287 18285 2777 6 YGYLSLPKPMK FEGRRGEKYGYLSLPK LSLPKPMKNNANLKSL K Y G M K N 0 0 0 0 0 0 0 1 0 0 2 2 1 0 2 1 0 0 2 0 0 0 11 1 1295.6948 Q9UBT7 Q9UBT7 534 544 CTNNAL1 Alpha-catulin yes yes 2 0.0039332 96.82 By MS/MS By MS/MS 2 2 19775000 11179000 8596300 7426 2992 8473;8474 18931;18932;18933;18934 18288;18289;18290 18288 1186 6293 3 YHELPTLEER CTEQEMPRYHELPTLE ELPTLEERSGPLHPGA R Y H E R S 0 1 0 0 0 0 3 0 1 0 2 0 0 0 1 0 1 0 1 0 0 0 10 0 1285.6303 Q92692 Q92692 454 463 PVRL2 Nectin-2 yes yes 2;3 0.00096078 99.788 By MS/MS By MS/MS 2 2 51206000 32521000 18685000 7427 2595 8475 18935;18936;18937;18938 18291;18292;18293;18294 18292 8412 4 YHGHSMSDPGVSYR LMELQTYRYHGHSMSD SDPGVSYRTREEIQEV R Y H Y R T 0 1 0 1 0 0 0 2 2 0 0 0 1 0 1 3 0 0 2 1 0 0 14 0 1591.6838 P08559;Q5JPU3;P29803 P08559 289 302 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 2;3 0.002458 73.279 By MS/MS By MS/MS 2 3 462640000 218400000 244240000 7428 1659 8476;8477 18939;18940;18941;18942;18943 18295;18296;18297;18298;18299;18300 18300 611 3128;3129 6 YHLEETTSNLEK Y H E K 0 0 1 0 0 0 3 0 1 0 2 1 0 0 0 1 2 0 1 0 0 0 12 0 1462.694 REV__O95235 yes yes 2 0.030286 41.401 By MS/MS 1 8276100 0 8276100 + 7429 3200 8478 18944 18301 18301 1 YIASVQGSTPSPR RSKADVERYIASVQGS QGSTPSPRQKSMKGFY R Y I P R Q 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 3 1 0 1 1 0 0 13 0 1361.6939 P49792;F8WBP7 P49792 11 23 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 2 5.935E-05 123.1 By MS/MS By MS/MS 1 1 20522000 10038000 10485000 7430 1860 8479 18945;18946 18302;18303 18303 3612;3613 2 YICENQDSISSK DDRADLAKYICENQDS NQDSISSKLKECCEKP K Y I S K L 0 0 1 1 1 1 1 0 0 2 0 1 0 0 0 3 0 0 1 0 0 0 12 0 1442.6348 B7WNR0;A0A0C4DGB6;CON__P02768-1;P02768;C9JKR2;H0YA55;D6RHD5 B7WNR0 172 183 ALB Serum albumin yes no 2 0.001131 110.38 By MS/MS By matching 1 1 17289000 10425000 6863600 + 7431 314 8480 18947;18948 18304 18304 1 YIDQEELNK KTKKIKEKYIDQEELN IDQEELNKTKPIWTRN K Y I N K T 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1150.5506 P07900;Q14568;P08238;Q58FF8 P08238 276 284 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 2 6.2139E-06 157.58 By MS/MS By MS/MS 1 1 78078000 38163000 39915000 7432 1658;1656 8481 18949;18950 18305;18306 18306 2 YIEIDSDEEPR PGKSQKRKYIEIDSDE IDSDEEPRGELLSLRD K Y I P R G 0 1 0 2 0 0 3 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 11 0 1364.6096 E7EW05;Q9NVU7 E7EW05 543 553 SDAD1 Protein SDA1 homolog yes no 2 9.9969E-06 128.54 By MS/MS By MS/MS 1 1 240190000 116040000 124150000 7433 832 8482 18951;18952 18307;18308 18308 1553 2 YISPDQLADLYK KSPDDPSRYISPDQLA DQLADLYKSFIKDYPV R Y I Y K S 1 0 0 2 0 1 0 0 0 1 2 1 0 0 1 1 0 0 2 0 0 0 12 0 1424.7187 P06733 P06733 270 281 ENO1 Alpha-enolase yes yes 2 0.00061335 115.91 By MS/MS By MS/MS 1 1 34737000 17616000 17120000 7434 1646 8483 18953;18954 18309;18310 18310 2 YKDLDEDELLGNLSETELK PFRKDLEKYKDLDEDE NLSETELKQLE_____ K Y K L K Q 0 0 1 3 0 0 4 1 0 0 5 2 0 0 0 1 1 0 1 0 0 0 19 1 2223.0794 H0YNU8;Q9NYL9 H0YNU8 12 30 TMOD3 Tropomodulin-3 yes no 3 9.7657E-07 125.91 By MS/MS By MS/MS 1 1 26705000 13765000 12941000 7435 1220 8484 18955;18956 18311;18312;18313 18313 2281;7223 3 YKLLIHMR RYKPFNARYKLLIHMR YKLLIHMRVHSGEKPN R Y K M R V 0 1 0 0 0 0 0 0 1 1 2 1 1 0 0 0 0 0 1 0 0 0 8 1 1072.6216 A0A0D9SEX9;Q8NBF1;Q8NEA6 A0A0D9SEX9 422 429 GLIS1;GLIS3 Zinc finger protein GLIS1;Zinc finger protein GLIS3 yes no 1 0.010197 60.788 By matching By MS/MS 1 1 6595400 3625900 2969500 7436 337 8485 18957;18958 18314 18314 1 YKSTTSVSEEDVSSRYSR PPRTVSGRYKSTTSVS DVSSRYSRTDRSGFPR R Y K S R T 0 2 0 1 0 0 2 0 0 0 0 1 0 0 0 6 2 0 2 2 0 0 18 2 2079.9709 Q96IZ0 Q96IZ0 226 243 PAWR PRKC apoptosis WT1 regulator protein yes yes 2 0.031947 41.052 By MS/MS 1 0 0 0 7437 2669 8486 18959 18315 18315 5500;5501 1 YLAEFATGNDR KMKGDYHRYLAEFATG EFATGNDRKEAAENSL R Y L D R K 2 1 1 1 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 11 0 1255.5833 P62258;K7EM20 P62258 131 141 YWHAE 14-3-3 protein epsilon yes no 2 2.1269E-05 128.36 By MS/MS By MS/MS 1 1 14442000 7630200 6812100 7438 1936 8487 18960;18961 18316;18317;18318;18319 18316 4 YLCEGTESPYQTGQLHPAIR SRLLDVPRYLCEGTES GQLHPAIRVADLLQHI R Y L I R V 1 1 0 0 1 2 2 2 1 1 2 0 0 0 2 1 2 0 2 0 0 0 20 0 2319.0954 H0Y6V4;A0A0G2JQF6;H0Y6P5;Q5TG12;E9PGC5;Q15262 H0Y6V4 109 128 PTPRK Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase kappa yes no 3 0.00013722 91.14 By MS/MS By MS/MS 1 1 28957000 16165000 12792000 7439 364 8488 18962;18963 18320;18321 18320 671;8034 2 YLEESDEDDLF VRAKKPIKYLEESDED ESDEDDLF________ K Y L L F - 0 0 0 3 0 0 3 0 0 0 2 0 0 1 0 1 0 0 1 0 0 0 11 0 1373.5511 P11388;J3QR57 P11388 1521 1531 TOP2A DNA topoisomerase 2-alpha yes no 1;2 1.1489E-06 146.11 By MS/MS By matching 2 2 179790000 117120000 62669000 7440 1682 8489 18964;18965;18966;18967 18322;18323 18322 3176 2 YLEQRISIKFCVK ________________ ISIKFCVKLNKSASET R Y L V K L 0 1 0 0 1 1 1 0 0 2 1 2 0 1 0 1 0 0 1 1 0 0 13 2 1682.9178 A0A0U1RQW1;Q3ZCU0 A0A0U1RQW1 5 17 Putative uncharacterized protein FLJ37770 yes no 3 0.024291 55.452 By MS/MS 1 9238700 9238700 0 7441 391 8490 18968 18324 18324 719 0 YLGSPITTVPK NLVDSEMKYLGSPITT SPITTVPKLDKNPNLG K Y L P K L 0 0 0 0 0 0 0 1 0 1 1 1 0 0 2 1 2 0 1 1 0 0 11 0 1174.6598 D6RJC2;P30307 D6RJC2 165 175 CDC25C M-phase inducer phosphatase 3 yes no 2 0.0021258 89.356 By MS/MS By MS/MS 1 1 30481000 18457000 12024000 7442 770 8491 18969;18970 18325;18326 18325 1379 2 YLLGDAPVSPSSQK HLRGQEHKYLLGDAPV PVSPSSQKLKRKAEED K Y L Q K L 1 0 0 1 0 1 0 1 0 0 2 1 0 0 2 3 0 0 1 1 0 0 14 0 1460.7511 H3BMI8;Q9NYB0 H3BMI8 24 37 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes no 2 1.8716E-20 154.81 By MS/MS By MS/MS 1 1 530410000 298120000 232290000 7443 1228 8492 18971;18972 18327;18328 18327 2290 2 YLLHFSHYVNEVVPDSFKKPYLIK RRDSIDEKYLLHFSHY FKKPYLIKITSDWCFS K Y L I K I 0 0 1 1 0 0 1 0 2 1 3 3 0 2 2 2 0 0 3 3 0 0 24 2 2935.5636 Q5TDG9;Q5TDH4;Q9Y2G8 Q5TDG9 142 165 DNAJC16 DnaJ homolog subfamily C member 16 yes no 3 0.016447 64.2 By MS/MS 1 11160000 11160000 0 7444 2255 8493 18973 18329 18329 4510 0 YLLSQSSPAPLTAAEEELR VSLHGYKKYLLSQSSP TAAEEELRQIKINEVQ K Y L L R Q 3 1 0 0 0 1 3 0 0 0 4 0 0 0 2 3 1 0 1 0 0 0 19 0 2074.0582 F8VS81;Q12792 F8VS81 175 193 TWF1 Twinfilin-1 yes no 2 1.1246E-32 168.09 By MS/MS 1 21481000 0 21481000 7445 1009 8494 18974 18330 18330 1896 1 YLPLNTALYEPPLDPELPALDSDGDSDDGEDGRGDEK RYSPDELRYLPLNTAL EDGRGDEKRKNKGTSD R Y L E K R 2 1 1 8 0 0 4 4 0 0 6 1 0 0 5 2 1 0 2 0 0 0 37 1 3987.8022 S5FZ81;Q8WUB8 S5FZ81 276 312 PHF10 PHD finger protein 10 yes no 3 0.00069303 53.416 By MS/MS By matching 1 1 98381000 59832000 38549000 7446 2553 8495 18975;18976 18331 18331 5213;5214 1 YLSADSGDADDSDADLGSAVK TAEDSEIRYLSADSGD ADLGSAVKQLQEFIPN R Y L V K Q 4 0 0 6 0 0 0 2 0 0 2 1 0 0 0 4 0 0 1 1 0 0 21 0 2070.8866 Q15361 Q15361 476 496 TTF1 Transcription termination factor 1 yes yes 2 3.2289E-89 201.95 By MS/MS By MS/MS 1 1 42821000 21987000 20834000 7447 2132 8496 18977;18978 18332;18333 18333 4218 2 YLSEVASGDNK KMKGDYFRYLSEVASG EVASGDNKQTTVSNSQ R Y L N K Q 1 0 1 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 1 1 0 0 11 0 1181.5564 P31946 P31946 130 140 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 2 0.00027599 117.7 By MS/MS By MS/MS 1 1 8684000 4247200 4436800 7448 1786 8497 18979;18980 18334;18335 18334 2 YLSFTPPEK DSNTVKQKYLSFTPPE LSFTPPEKDGFPSGTP K Y L E K D 0 0 0 0 0 0 1 0 0 0 1 1 0 1 2 1 1 0 1 0 0 0 9 0 1080.5492 Q13177 Q13177 139 147 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 2 0.00048317 149.94 By MS/MS By MS/MS 1 1 37993000 23419000 14574000 7449 2047 8498 18981;18982 18336;18337;18338;18339 18339 4017 4 YLSFTPPEKDGFPSGTPALNAK DSNTVKQKYLSFTPPE GTPALNAKGTEAPAVV K Y L A K G 2 0 1 1 0 0 1 2 0 0 2 2 0 2 4 2 2 0 1 0 0 0 22 1 2336.1689 Q13177 Q13177 139 160 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 2;3 0.00032025 81.016 By MS/MS By MS/MS 2 2 148970000 76776000 72197000 7450 2047 8499 18983;18984;18985;18986 18340;18341;18342;18343 18341 4017 4 YLSQVLHGK PARHWNAKYLSQVLHG LSQVLHGKQIRFRMGM K Y L G K Q 0 0 0 0 0 1 0 1 1 0 2 1 0 0 0 1 0 0 1 1 0 0 9 0 1043.5764 Q96EW2 Q96EW2 62 70 HSPBAP1 HSPB1-associated protein 1 yes yes 1 0.024371 50.791 By MS/MS 1 2695100 2695100 0 7451 2645 8500 18987 18344 18344 5457 0 YLSVPPSPNISTSESR PSSSPDPRYLSVPPSP NISTSESRSPPEGDTT R Y L S R S 0 1 1 0 0 0 1 0 0 1 1 0 0 0 3 5 1 0 1 1 0 0 16 0 1732.8632 Q9BTC0 Q9BTC0 1024 1039 DIDO1 Death-inducer obliterator 1 yes yes 2 0.019208 63.682 By MS/MS By matching 1 1 4367000 2220300 2146600 7452 2747 8501 18988;18989 18345 18345 5713;5714 1 YLVDGTKPNAGSEEISSEDDELVEEK LFQYPDTRYLVDGTKP DDELVEEKKQQRRRVP R Y L E K K 1 0 1 3 0 0 6 2 0 1 2 2 0 0 1 3 1 0 1 2 0 0 26 1 2852.3087 Q9NY61 Q9NY61 305 330 AATF Protein AATF yes yes 3 2.4508E-07 97.059 By MS/MS By MS/MS 2 2 124290000 50893000 73395000 7453 2945 8502;8503 18990;18991;18992;18993 18346;18347;18348;18349;18350;18351 18346 6205;6206;6207;7886 6 YLVDGTKPNAGSEEISSEDDELVEEKK LFQYPDTRYLVDGTKP DELVEEKKQQRRRVPA R Y L K K Q 1 0 1 3 0 0 6 2 0 1 2 3 0 0 1 3 1 0 1 2 0 0 27 2 2980.4037 Q9NY61 Q9NY61 305 331 AATF Protein AATF yes yes 3 0.00060017 67.097 By MS/MS By MS/MS 1 1 27452000 11303000 16149000 7454 2945 8504 18994;18995 18352;18353 18352 6205;6206;6207;7886 2 YMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKK DDQEAYFRYMAENPTA NPIAPTKKIIDPLPPI R Y M K K I 3 0 3 3 0 1 6 2 0 1 1 2 1 0 3 1 2 0 2 2 0 0 33 1 3652.6363 A0A0A0MSJ0;Q86XP3;J3KRE3 A0A0A0MSJ0 44 76 DDX42 ATP-dependent RNA helicase DDX42 yes no 3 0.0019359 53.266 By MS/MS By MS/MS 1 1 233870000 139260000 94610000 7455 249 8505 18996;18997 18354;18355;18356 18355 6903;8015 3 YMLTHQELASDGEIETK KALAKCEKYMLTHQEL SDGEIETKLIKGDIYK K Y M T K L 1 0 0 1 0 1 3 1 1 1 2 1 1 0 0 1 2 0 1 0 0 0 17 0 1963.9197 H7BYN4;Q02241 H7BYN4 851 867 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 2;3 7.3296E-05 110.31 By MS/MS By MS/MS 4 4 99213000 50087000 49126000 7456 1263 8506;8507 18998;18999;19000;19001;19002;19003;19004;19005 18357;18358;18359;18360;18361;18362;18363;18364;18365;18366;18367 18361 456 2346;7228 11 YMNSDTTSPELR RWSDYVERYMNSDTTS DTTSPELREHLAQKPV R Y M L R E 0 1 1 1 0 0 1 0 0 0 1 0 1 0 1 2 2 0 1 0 0 0 12 0 1412.6242 Q96ST3 Q96ST3 1105 1116 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 5.0384E-10 143.25 By MS/MS By MS/MS 2 2 97643000 50723000 46921000 7457 2712 8508;8509 19006;19007;19008;19009 18368;18369;18370;18371 18371 1079 5613 4 YMSFTDK KKTSNSQKYMSFTDKS KYMSFTDKSAEDYNSS K Y M D K S 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 1 1 0 1 0 0 0 7 0 890.3844 H0YCM0;E9PM17;B3KNX7;Q13153 H0YCM0 33 39 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 2 0.0080191 85.862 By MS/MS By MS/MS 1 1 12675000 6824300 5850900 7458 536 8510 19010;19011 18372;18373 18372 211 1013 2 YMSQMSVPEQAELEK PHTFPHSRYMSQMSVP PEQAELEKLKQRINFS R Y M E K L 1 0 0 0 0 2 3 0 0 0 1 1 2 0 1 2 0 0 1 1 0 0 15 0 1768.8012 A6NNN6;E7ETA6;Q15154;E5RGQ4;E9PGW9;E7EV93 A6NNN6 88 102 PCM1 Pericentriolar material 1 protein yes no 2 6.3107E-05 115.58 By MS/MS By MS/MS 3 3 139860000 74414000 65444000 7459 484 8511;8512 19012;19013;19014;19015;19016;19017 18374;18375;18376;18377;18378 18377 187;188 882 5 YMSQMSVPEQAELEKLK PHTFPHSRYMSQMSVP QAELEKLKQRINFSDL R Y M L K Q 1 0 0 0 0 2 3 0 0 0 2 2 2 0 1 2 0 0 1 1 0 0 17 1 2009.9802 A6NNN6;E7ETA6;Q15154;E5RGQ4;E9PGW9;E7EV93 A6NNN6 88 104 PCM1 Pericentriolar material 1 protein yes no 3 0.0092711 65.652 By MS/MS By matching 1 1 30346000 18766000 11580000 7460 484 8513 19018;19019 18379 18379 187;188 882 1 YNILGTNTIMDK HAAENPGKYNILGTNT GTNTIMDKMMVAGFKK K Y N D K M 0 0 2 1 0 0 0 1 0 2 1 1 1 0 0 0 2 0 1 0 0 0 12 0 1381.6912 Q00839 Q00839 525 536 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 2.9348E-09 140.78 By MS/MS By MS/MS 2 2 47884000 26180000 21704000 7461 1976 8514;8515 19020;19021;19022;19023 18380;18381;18382 18382 782 3 YNLDASEEEDSNK EDDADLSKYNLDASEE SEEEDSNKKKSNRRSR K Y N N K K 1 0 2 2 0 0 3 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 13 0 1512.6216 O95218 O95218 183 195 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.011043 72.523 By MS/MS By matching 1 1 239210000 118590000 120620000 7462 1582 8516 19024;19025 18383 18383 2997 1 YNLDASEEEDSNKK EDDADLSKYNLDASEE EEEDSNKKKSNRRSRS K Y N K K K 1 0 2 2 0 0 3 0 0 0 1 2 0 0 0 2 0 0 1 0 0 0 14 1 1640.7166 O95218 O95218 183 196 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 9.9061E-67 207.66 By MS/MS By MS/MS 1 1 123580000 62921000 60656000 7463 1582 8517 19026;19027 18384;18385 18384 2997 2 YNLDASEEEDSNKKK EDDADLSKYNLDASEE EEDSNKKKSNRRSRSK K Y N K K S 1 0 2 2 0 0 3 0 0 0 1 3 0 0 0 2 0 0 1 0 0 0 15 2 1768.8115 O95218 O95218 183 197 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 0.00072639 102.52 By MS/MS By matching 1 1 50343000 25706000 24637000 7464 1582 8518 19028;19029 18386 18386 2997 1 YNQSISLR RQKNRSWKYNQSISLR YNQSISLRRPRLASQS K Y N L R R 0 1 1 0 0 1 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 0 8 0 979.50869 Q9UBH6 Q9UBH6 663 670 XPR1 Xenotropic and polytropic retrovirus receptor 1 yes yes 2 0.02779 65.157 By MS/MS By matching 1 1 9640600 5830100 3810500 7465 2990 8519 19030;19031 18387 18387 6291 1 YNTEGRVSPSPSQESLSSSK YFNNMRMKYNTEGRVS QESLSSSKSDTDTGVC K Y N S K S 0 1 1 0 0 1 2 1 0 0 1 1 0 0 2 7 1 0 1 1 0 0 20 1 2139.008 Q5JSH3;H7BY83 Q5JSH3 554 573 WDR44 WD repeat-containing protein 44 yes no 3 0.0060258 75.91 By MS/MS By matching 1 1 13783000 8675200 5107500 7466 2219 8520 19032;19033 18388 18388 4438 0 YNVSTTPYLQSVK TRTSCLIKYNVSTTPY TPYLQSVKKKVQFDGT K Y N V K K 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 2 2 0 2 2 0 0 13 0 1498.7668 Q8WWK9 Q8WWK9 592 604 CKAP2 Cytoskeleton-associated protein 2 yes yes 2 0.001652 113.76 By MS/MS By MS/MS 1 1 30226000 17543000 12684000 7467 2563 8521 19034;19035 18389;18390 18389 7749 2 YNYKPLCDM PIMYKIIRYNYKPLCD NYKPLCDM________ R Y N D M - 0 0 1 1 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 0 0 9 1 1202.51 H7C1J3 H7C1J3 152 160 DHTKD1 yes yes 2 0.030126 44.447 By MS/MS 1 0 0 0 7468 1280 8522 19036 18391 18391 460 1 YPESNRTPVKPSSVEEEDSFFR PPSSQTPKYPESNRTP EEEDSFFRQRMFSPME K Y P F R Q 0 2 1 1 0 0 4 0 0 0 0 1 0 2 3 4 1 0 1 2 0 0 22 2 2599.2191 Q9UHB7 Q9UHB7 668 689 AFF4 AF4/FMR2 family member 4 yes yes 3 0.022115 55.575 By MS/MS 1 10533000 10533000 0 7469 3004 8523 19037 18392 18392 6333 1 YPIEHGIITNWDDMEK KRGILTLKYPIEHGII TNWDDMEKIWHHTFYN K Y P E K I 0 0 1 2 0 0 2 1 1 3 0 1 1 0 1 0 1 1 1 0 0 0 16 0 1959.9037 P68133;P68032;A6NL76;P63267;P62736;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P68133 71 86 ACTA1;ACTC1;ACTG2;ACTA2 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 2;3 1.2664E-06 131.32 By MS/MS By MS/MS 4 4 207670000 89989000 117680000 7470 1955 8524;8525 19038;19039;19040;19041;19042;19043;19044;19045 18393;18394;18395;18396;18397;18398;18399 18396 769 7 YPSIVTSSLILK VAICHPLRYPSIVTSS VTSSLILKATLFMVLR R Y P L K A 0 0 0 0 0 0 0 0 0 2 2 1 0 0 1 3 1 0 1 1 0 0 12 0 1319.7701 Q8NGI3 Q8NGI3 141 152 OR56B1 Olfactory receptor 56B1 yes yes 2 0.0072462 70.412 By MS/MS 1 0 0 0 7471 2522 8526 19046 18400 18400 5149;5150;5151;7741 1 YQASHPNLR TSKEQEAKYQASHPNL QASHPNLRKLDDTDPV K Y Q L R K 1 1 1 0 0 1 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 0 9 0 1084.5414 O95721;C9JAF7 O95721 160 168 SNAP29 Synaptosomal-associated protein 29;Synaptosomal-associated protein yes no 2 0.020966 66.351 By matching By MS/MS 1 1 15309000 7715700 7593100 7472 1608 8527 19047;19048 18401 18401 0 YQDEVFGGFVTEPQEESEEEVEEPEER YVHNDIFRYQDEVFGG EVEEPEERQQTPEVVP R Y Q E R Q 0 1 0 1 0 2 11 2 0 0 0 0 0 2 2 1 1 0 1 3 0 0 27 0 3215.3579 Q13283 Q13283 133 159 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 3;4 1.8905E-07 102.32 By MS/MS By MS/MS 3 3 1227300000 718320000 508990000 7473 2055 8528 19049;19050;19051;19052;19053;19054 18402;18403;18404;18405;18406;18407;18408;18409 18404 4046 8 YQEQGGEASPQRTWEQQQEVVSR EAARREQRYQEQGGEA QQQEVVSRNRNEQESA R Y Q S R N 1 2 0 0 0 6 4 2 0 0 0 0 0 0 1 2 1 1 1 2 0 0 23 1 2719.2586 H0Y5J4;Q9UJU6 H0Y5J4 153 175 DBNL Drebrin-like protein yes no 3 0.029337 42.254 By MS/MS 1 12810000 0 12810000 7474 1129 8529 19055 18410 18410 1 YQESPGIQMK SDTPNPEKYQESPGIQ ESPGIQMKTRLKEGAS K Y Q M K T 0 0 0 0 0 2 1 1 0 1 0 1 1 0 1 1 0 0 1 0 0 0 10 0 1179.5594 E9PJ60;Q9UHI6 E9PJ60 319 328 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.00038378 110.54 By MS/MS By MS/MS 2 2 54779000 28897000 25882000 7475 887 8530;8531 19056;19057;19058;19059 18411;18412;18413 18411 333 1650 3 YQKLPSDEDESGTEESDNTPLLK KLKGSGLRYQKLPSDE SDNTPLLKDDKDRKAE R Y Q L K D 0 0 1 3 0 1 4 1 0 0 3 2 0 0 2 3 2 0 1 0 0 0 23 1 2594.1872 Q9ULH0 Q9ULH0 1516 1538 KIDINS220 Kinase D-interacting substrate of 220 kDa yes yes 3 0.0024787 60.278 By MS/MS 1 29366000 29366000 0 7476 3041 8532 19060 18414 18414 6404;6405 1 YQPLASTASDNDFVTPEPR KKPSTGSRYQPLASTA DFVTPEPRRTTRRHPN R Y Q P R R 2 1 1 2 0 1 1 0 0 0 1 0 0 1 3 2 2 0 1 1 0 0 19 0 2106.9858 Q15021 Q15021 1325 1343 NCAPD2 Condensin complex subunit 1 yes yes 2;3 0.0002766 115.85 By MS/MS By MS/MS 3 3 160780000 83852000 76932000 7477 2118 8533;8534 19061;19062;19063;19064;19065;19066 18415;18416;18417;18418;18419 18417 4185;4186;7589 4 YQQETSVSQLPGRPKSPLSK SQSGSPVRYQQETSVS RPKSPLSKMAQRPYQM R Y Q S K M 0 1 0 0 0 3 1 1 0 0 2 2 0 0 3 4 1 0 1 1 0 0 20 2 2229.1753 Q9HCD6;A0A087WUE1 Q9HCD6 1564 1583 TANC2 Protein TANC2 yes no 3 0.00097457 86.179 By matching By MS/MS 1 1 13287000 7079100 6208100 7478 2873 8535 19067;19068 18420 18420 6052 1 YQQPFEDFR REGSFESRYQQPFEDF QQPFEDFRISQEHLAD R Y Q F R I 0 1 0 1 0 2 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 9 0 1228.5513 P19174;V9GY71;V9GYH5 P19174 1253 1261 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 2 0.0067625 131.06 By MS/MS By MS/MS 1 1 125570000 65642000 59925000 7479 1731 8536 19069;19070 18421;18422;18423 18423 8240 3 YRSPEPDPYLSYR ________________ PDPYLSYRWKRRRSYS R Y R Y R W 0 2 0 1 0 0 1 0 0 0 1 0 0 0 3 2 0 0 3 0 0 0 13 1 1641.7787 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761 H3BRT8 7 19 CLK3 Dual specificity protein kinase CLK3 yes no 2;3 0.0012233 83.894 By MS/MS By MS/MS 2 2 86035000 49247000 36787000 7480 1242 8537 19071;19072;19073;19074 18424;18425;18426;18427 18426 2319 4 YRSPYSGPK RDRRFRGRYRSPYSGP RSPYSGPKFNSAIRGK R Y R P K F 0 1 0 0 0 0 0 1 0 0 0 1 0 0 2 2 0 0 2 0 0 0 9 1 1053.5243 G3XAC6;Q14498;Q5QP22;Q5QP23 G3XAC6 95 103 RBM39 RNA-binding protein 39 yes no 2;3 0.0063016 93.839 By MS/MS By MS/MS 2 2 352200000 187800000 164400000 7481 1089 8538 19075;19076;19077;19078 18428;18429;18430;18431;18432 18430 2050 4 YSAIQTLDGEIDLKLLTK DLDNDLMKYSAIQTLD IDLKLLTKVLAPEHEV K Y S T K V 1 0 0 2 0 1 1 1 0 2 4 2 0 0 0 1 2 0 1 0 0 0 18 1 2020.1092 Q96FT9 Q96FT9 142 159 IFT43 Intraflagellar transport protein 43 homolog yes yes 3 0.026104 41.257 By matching By MS/MS 1 1 10028000 6557000 3471000 7482 2649 8539 19079;19080 18433 18433 5467 1 YSDEQLNSGRQSPSQNER TPINYSLKYSDEQLNS QSPSQNERWARPKHII K Y S E R W 0 2 2 1 0 3 2 1 0 0 1 0 0 0 1 4 0 0 1 0 0 0 18 1 2093.9362 P25054;B7Z2B6;E9PFT7 P25054 1031 1048 APC Adenomatous polyposis coli protein yes no 3 0.012239 55.755 By MS/MS By MS/MS 1 1 13086000 7850600 5235800 7483 1760 8540 19081;19082 18434;18435 18435 3326 2 YSDGSIALDIFGPQK TPRKKEARYSDGSIAL LDIFGPQKMDPIYHTR R Y S Q K M 1 0 0 2 0 1 0 2 0 2 1 1 0 1 1 2 0 0 1 0 0 0 15 0 1609.7988 Q12923 Q12923 344 358 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 6.5882E-07 128.06 By MS/MS By MS/MS 1 1 25874000 14508000 11365000 7484 2034 8541 19083;19084 18436;18437 18436 3991 2 YSDLLSQSLNQPLTSSK FIVGQTEKYSDLLSQS NQPLTSSKAGSSPCLG K Y S S K A 0 0 1 1 0 2 0 0 0 0 4 1 0 0 1 5 1 0 1 0 0 0 17 0 1879.9527 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 46 62 SRCAP Helicase SRCAP yes no 2 0.031928 76.713 By MS/MS 1 4376500 4376500 0 7485 239 8542 19085 18438 18438 0 YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK ALREKSKKYSDVEVPA PLRHSFQKQQREKTRW K Y S Q K Q 2 1 0 3 1 1 1 3 1 0 1 1 0 2 2 7 2 0 2 3 0 0 33 1 3550.5947 P35611;E7EV99;E7ENY0;H0Y9H2 P35611 407 439 ADD1 Alpha-adducin yes no 3;4 0.0011598 52.674 By matching By MS/MS 1 2 47584000 19557000 28027000 7486 1799 8543 19086;19087;19088 18439;18440 18440 3399 2 YSEPRPWSSTDSDSSLR SSTENELKYSEPRPWS TDSDSSLRNLKPAVTK K Y S L R N 0 2 0 2 0 0 1 0 0 0 1 0 0 0 2 6 1 1 1 0 0 0 17 1 1968.8813 Q15032;H7C207;H7C1X4;H7BZ47 Q15032 354 370 R3HDM1 R3H domain-containing protein 1 yes no 2;3 0.00034236 92.563 By MS/MS By MS/MS 2 2 46311000 25508000 20803000 7487 2120 8544 19089;19090;19091;19092 18441;18442;18443;18444 18443 4190;4191 4 YSGVNQSMLFDKLITNTAEAVLQKMDDMK RSCRIRSRYSGVNQSM LQKMDDMKKMRRQRMR R Y S M K K 2 0 2 3 0 2 1 1 0 1 3 3 3 1 0 2 2 0 1 2 0 0 29 2 3289.6033 Q6PL18 Q6PL18 164 192 ATAD2 ATPase family AAA domain-containing protein 2 yes yes 3 0.017 41.908 By matching By MS/MS 1 1 26073000 15027000 11046000 7488 2331 8545 19093;19094 18445 18445 4708;4709;8377 1 YSHSYLSDSDTEAK LDNTSRPRYSHSYLSD SDSDTEAKLTETNA__ R Y S A K L 1 0 0 2 0 0 1 0 1 0 1 1 0 0 0 4 1 0 2 0 0 0 14 0 1601.6845 A0A0D9SFK2;Q92614 A0A0D9SFK2 2019 2032 MYO18A Unconventional myosin-XVIIIa yes no 2 0.0048453 76.311 By matching By MS/MS 1 1 21193000 12152000 9041400 7489 343 8546 19095;19096 18446 18446 608;609 1 YSLFVGFQKRNASPYWQQSR SPSFSERRYSLFVGFQ SPYWQQSRANFDSEED R Y S S R A 1 2 1 0 0 3 0 1 0 0 1 1 0 2 1 3 0 1 2 1 0 0 20 2 2461.2291 B5MC85;A0A0A0MSD2;A0A0C4DFM4 B5MC85 77 96 RMDN2 yes no 3 0.031696 45.941 By MS/MS 1 0 0 0 7490 245 8547 19097 18447 18447 1 YSLQSANASSLSSGQLKSPSLSQSQASR QRSQAPARYSLQSANA LSQSQASRVLGQSSSK R Y S S R V 3 1 1 0 0 4 0 1 0 0 4 1 0 0 1 11 0 0 1 0 0 0 28 1 2868.4213 Q9H2P0 Q9H2P0 392 419 ADNP Activity-dependent neuroprotector homeobox protein yes yes 3 6.0944E-10 96.045 By MS/MS By MS/MS 1 1 83997000 42941000 41056000 7491 2822 8548 19098;19099 18448;18449 18449 5912;5913 2 YSLSPSK HSTPSPTRYSLSPSKS RYSLSPSKSYKYSPKT R Y S S K S 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 3 0 0 1 0 0 0 7 0 780.40177 P49792;J3KNE0;A6NKT7;Q7Z3J3;F8VYC4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37;F8W705 P49792 785 791 RANBP2;RGPD3;RGPD4;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 no no 2 0.025716 93.598 By MS/MS By MS/MS 1 1 49695000 29113000 20582000 7492 1860;1455 8549 19100;19101 18450;18451 18451 2708;2709;3614 2 YSLSPSKSYKYSPETPPR HSTPSPTKYSLSPSKS YSPETPPRWTEDRNSL K Y S P R W 0 1 0 0 0 0 1 0 0 0 1 2 0 0 4 5 1 0 3 0 0 0 18 2 2086.0371 Q99666;O14715;J3KQ37;F8W705 Q99666 785 802 RGPD5;RGPD8 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 2 0.025067 50.675 By MS/MS 1 3394700 0 3394700 7493 1455 8550 19102 18452 18452 2708;2709;2710 0 YSPPAISPLVSEK PVAYVETKYSPPAISP ISPLVSEKQVEVKEGL K Y S E K Q 1 0 0 0 0 0 1 0 0 1 1 1 0 0 3 3 0 0 1 1 0 0 13 0 1386.7395 Q14694 Q14694 364 376 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes yes 2 0.011853 71.513 By MS/MS By MS/MS 1 1 24256000 12535000 11721000 7494 2106 8551 19103;19104 18453;18454 18453 4166;4167 2 YSPSQNSPIHHIPSR SVGNGSSRYSPSQNSP PIHHIPSRRSPAKTIA R Y S S R R 0 1 1 0 0 1 0 0 2 2 0 0 0 0 3 4 0 0 1 0 0 0 15 0 1718.8489 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;H0YF00;E9PJA7 Q9NYF8 284 298 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 0.0044019 65.956 By matching By MS/MS 1 1 38151000 22966000 15185000 7495 2947;888 8552 19105;19106 18455 18455 1660;1661;1662 1 YSPTSPK EYTPTSPKYSPTSPKY KYSPTSPKYSPTSPKY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 2 1 0 1 0 0 0 7 0 778.38612 P24928 P24928 1860 1866 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 2 0.028532 76.17 By matching By MS/MS 1 1 30895000 16998000 13896000 7496 1759 8553 19107;19108 18456 18456 1 YSPTSPTYSPTSPK VYTPTSPKYSPTSPTY TYSPTSPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 4 3 0 2 0 0 0 14 0 1511.7144 P24928 P24928 1909 1922 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 2 9.9235E-05 121.29 By MS/MS By MS/MS 3 3 260430000 134460000 125970000 7497 1759 8554;8555;8556 19109;19110;19111;19112;19113;19114 18457;18458;18459;18460;18461;18462;18463 18459 3317;3318;3319;7413;7414 7 YSPTSPTYSPTSPVYTPTSPK TYSPTTPKYSPTSPTY VYTPTSPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 6 5 5 0 3 1 0 0 21 0 2257.079 P24928 P24928 1888 1908 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.0052387 66.777 By MS/MS By MS/MS 3 3 72082000 40529000 31553000 7498 1759 8557;8558;8559 19115;19116;19117;19118;19119;19120 18464;18465;18466;18467;18468;18469 18465 3320;3321;3322;7415 6 YSPTSPTYSPTTPK KYSPTSPKYSPTSPTY TYSPTTPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 3 4 0 2 0 0 0 14 0 1525.73 P24928 P24928 1874 1887 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 6.3362E-16 144.88 By MS/MS By MS/MS 2 2 132160000 23282000 108880000 7499 1759 8560;8561 19121;19122;19123;19124 18470;18471;18472 18472 3323 2 YSQSAPGSPVSAQPVIMAVPPRPSSLVAK LASVPEYRYSQSAPGS RPSSLVAKPVAYMPAS R Y S A K P 4 1 0 0 0 2 0 1 0 1 1 1 1 0 6 6 0 0 1 4 0 0 29 1 2920.5481 P85037 P85037 465 493 FOXK1 Forkhead box protein K1 yes yes 3 0.00022054 68.895 By matching By MS/MS 1 1 21533000 13949000 7583400 7500 1968 8562 19125;19126 18473 18473 777 3767 1 YSSGGNFETPSK VDDFRQPRYSSGGNFE GNFETPSKRAPAKGRA R Y S S K R 0 0 1 0 0 0 1 2 0 0 0 1 0 1 1 3 1 0 1 0 0 0 12 0 1272.5622 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 368 379 OCLN Occludin yes no 2 5.7758E-07 133.89 By MS/MS By MS/MS 1 1 17311000 10113000 7197700 7501 357 8563 19127;19128 18474;18475 18474 642;8031 2 YSSLNLFDTYK AKGKDGKKYSSLNLFD LNLFDTYKGKSLEIQK K Y S Y K G 0 0 1 1 0 0 0 0 0 0 2 1 0 1 0 2 1 0 2 0 0 0 11 0 1349.6503 P48634 P48634 17 27 PRRC2A Protein PRRC2A yes yes 2 0.013532 73.841 By MS/MS 1 0 0 0 7502 1846 8564 19129 18476 18476 3542;8284 1 YSTLHTQSAEPPPPPEPAR VCEEPQVKYSTLHTQS PPPPEPARI_______ K Y S A R I 2 1 0 0 0 1 2 0 1 0 1 0 0 0 6 2 2 0 1 0 0 0 19 0 2074.012 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 176 CD99L2 CD99 antigen-like protein 2 yes no 2;3 8.4534E-07 125.96 By MS/MS By MS/MS 2 2 60732000 45101000 15631000 7503 389 8565 19130;19131;19132;19133 18477;18478;18479;18480 18478 715;6943;8042 4 YSTLHTQSAEPPPPPEPARI VCEEPQVKYSTLHTQS PPPEPARI________ K Y S R I - 2 1 0 0 0 1 2 0 1 1 1 0 0 0 6 2 2 0 1 0 0 0 20 1 2187.096 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 177 CD99L2 CD99 antigen-like protein 2 yes no 2;3 0.004787 83.856 By MS/MS By MS/MS 2 3 130220000 67608000 62616000 7504 389 8566 19134;19135;19136;19137;19138 18481;18482;18483;18484 18481 715;6943;8042 4 YSVDIPLDK YNHLMPTRYSVDIPLD SVDIPLDKTVVNKDVF R Y S D K T 0 0 0 2 0 0 0 0 0 1 1 1 0 0 1 1 0 0 1 1 0 0 9 0 1048.5441 P61353;K7EQQ9;K7ELC7 P61353 85 93 RPL27 60S ribosomal protein L27 yes no 2 0.0083374 107.69 By MS/MS By MS/MS 1 1 37250000 20609000 16641000 7505 1930 8567 19139;19140 18485;18486 18485 2 YSVGSLSPVSASVLK TPKKKRIKYSVGSLSP PVSASVLKKTEQKEKV K Y S L K K 1 0 0 0 0 0 0 1 0 0 2 1 0 0 1 5 0 0 1 3 0 0 15 0 1492.8137 Q9UBU7 Q9UBU7 353 367 DBF4 Protein DBF4 homolog A yes yes 2 2.437E-10 136.26 By MS/MS By MS/MS 1 1 27508000 15355000 12152000 7506 2993 8568 19141;19142 18487;18488 18487 6294 2 YSVSSPNSLGVVPYLGGEQSYYR ________________ GGEQSYYRAAAAAAGG R Y S Y R A 0 1 1 0 0 1 1 3 0 0 2 0 0 0 2 5 0 0 4 3 0 0 23 0 2521.2125 Q12948 Q12948 5 27 FOXC1 Forkhead box protein C1 yes yes 2 0.00069347 77.681 By MS/MS 1 22916000 0 22916000 7507 2035 8569 19143 18489 18489 4000 1 YTEFYHVPTHSDASK PRKHIVERYTEFYHVP PTHSDASKKRLIEDTE R Y T S K K 1 0 0 1 0 0 1 0 2 0 0 1 0 1 1 2 2 0 2 1 0 0 15 0 1780.8057 Q96HC4;H0YBI4 Q96HC4 247 261 PDLIM5 PDZ and LIM domain protein 5 yes no 3 2.689E-05 119.88 By MS/MS By MS/MS 1 1 22149000 11703000 10447000 7508 2662 8570 19144;19145 18490;18491 18491 7793;8421 1 YTISQEAYDQR EDVSRVEKYTISQEAY SQEAYDQRQDTVRSFL K Y T Q R Q 1 1 0 1 0 2 1 0 0 1 0 0 0 0 0 1 1 0 2 0 0 0 11 0 1372.6259 Q99426;K7EP07;K7EK42 Q99426 107 117 TBCB Tubulin-folding cofactor B yes no 2 0.0097067 79.974 By MS/MS 1 3660500 3660500 0 7509 2719 8571 19146 18492 18492 8437 1 YTNYEVVTMVTRGHRLYQPK EGRMPFEKYTNYEVVT GHRLYQPKLASNYVYE K Y T P K L 0 2 1 0 0 1 1 1 1 0 1 1 1 0 1 0 3 0 3 3 0 0 20 2 2454.2478 P42680 P42680 569 588 TEC Tyrosine-protein kinase Tec yes yes 3 0.026312 45.436 By MS/MS 1 4188800 4188800 0 7510 1827 8572 19147 18493 18493 691 0 YTPPTQPPISPPYQEACTLK LEGGSEYKYTPPTQPP YQEACTLKRKGQLAKE K Y T L K R 1 0 0 0 1 2 1 0 0 1 1 1 0 0 6 1 3 0 2 0 0 0 20 0 2287.1195 B7Z4K4;Q9UET6 B7Z4K4 125 144 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase yes no 3 0.031936 53.504 By MS/MS 1 0 0 0 7511 589 8573 19148 18494 18494 1 YTPTSPSYSPSSPEYTPTSPK SYSPASPKYTPTSPSY EYTPTSPKYSPTSPKY K Y T P K Y 0 0 0 0 0 0 1 0 0 0 0 1 0 0 6 6 4 0 3 0 0 0 21 0 2273.0376 P24928 P24928 1839 1859 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.03124 45.825 By matching By MS/MS 1 1 15669000 7361100 8308000 7512 1759 8574 19149;19150 18495 18495 1 YTQSRSTSSEK PNPRASPRYTQSRSTS SRSTSSEKRSYSRSPS R Y T E K R 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 4 2 0 1 0 0 0 11 1 1272.5946 A7MD48 A7MD48 416 426 SRRM4 Serine/arginine repetitive matrix protein 4 yes yes 2 0.021367 71.888 By MS/MS 1 4954100 0 4954100 7513 491 8575 19151 18496 18496 893 1 YTVLSVGPGGLRSGR SWGPRPRRYTVLSVGP PGGLRSGRLPLQPRVQ R Y T G R L 0 2 0 0 0 0 0 4 0 0 2 0 0 0 1 2 1 0 1 2 0 0 15 1 1517.8314 P18627 P18627 99 113 LAG3 Lymphocyte activation gene 3 protein yes yes 2 0.026227 48.883 By MS/MS 1 2754000 2754000 0 7514 1727 8576 19152 18497 18497 3256;3257 0 YVASVLGLTPSPR RSKADVERYVASVLGL LGLTPSPRQKSMKGFY R Y V P R Q 1 1 0 0 0 0 0 1 0 0 2 0 0 0 2 2 1 0 1 2 0 0 13 0 1358.7558 Q99666;O14715;F8W705;C9J1W9;C9JF75 Q99666 11 23 RGPD5;RGPD8;RGPD6 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 2 1.3191E-11 150.05 By MS/MS By MS/MS 1 1 20835000 12200000 8635200 7515 1455 8577 19153;19154 18498;18499 18499 2711 2 YVASYLLAALGGNSSPSAK ________________ GNSSPSAKDIKKILDS R Y V A K D 4 0 1 0 0 0 0 2 0 0 3 1 0 0 1 4 0 0 2 1 0 0 19 0 1867.968 P05387 P05387 3 21 RPLP2 60S acidic ribosomal protein P2 yes yes 2;3 0 300.5 By MS/MS By MS/MS 2 2 137140000 80181000 56960000 7516 1641 8578 19155;19156;19157;19158 18500;18501;18502;18503 18501 3096;3097 4 YVDEENSDGETSNHR VILEKAGKYVDEENSD DGETSNHRLQETSSQS K Y V H R L 0 1 2 2 0 0 3 1 1 0 0 0 0 0 0 2 1 0 1 1 0 0 15 0 1750.703 Q8N9T8;H0YFD2;F8WFC1;H0YH26 Q8N9T8 130 144 KRI1 Protein KRI1 homolog yes no 2;3 0.00052228 111.7 By MS/MS By matching 3 2 37968000 27721000 10248000 7517 2490 8579;8580 19159;19160;19161;19162;19163 18504;18505;18506 18505 5084 3 YVDSEGHLYTVPIR ________________ HLYTVPIREQGNIYKP K Y V I R E 0 1 0 1 0 0 1 1 1 1 1 0 0 0 1 1 1 0 2 2 0 0 14 0 1647.8257 Q03135 Q03135 6 19 CAV1 Caveolin-1 yes yes 2;3 7.6056E-16 147.62 By MS/MS By MS/MS 1 2 39535000 0 39535000 7518 1993 8581 19164;19165;19166 18507;18508;18509 18509 7520;8318 3 YVEQSNLMMEKRNNSLQTATENTQAR ELIERNQRYVEQSNLM ATENTQARVLHAEQEK R Y V A R V 2 2 4 0 0 3 3 0 0 0 2 1 2 0 0 2 3 0 1 1 0 0 26 2 3055.4451 A0A0A0MT60;Q5T1M5 A0A0A0MT60 630 655 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 3 0.011196 60.176 By matching By MS/MS 1 1 22943000 9085300 13857000 7519 266 8582 19167;19168 18510 18510 6915 0 YVESDDEKPLDDETVNEDASNENSENDITMQSLPK RKPSIVTKYVESDDEK ITMQSLPKGTVIVQPE K Y V P K G 1 0 4 6 0 1 6 0 0 1 2 2 1 0 2 4 2 0 1 2 0 0 35 1 3969.7069 P46100;A0A096LNL9;A0A096LNW1;A0A096LNN3;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100 89 123 ATRX Transcriptional regulator ATRX yes no 3 1.9742E-05 68.481 By MS/MS By matching 1 1 97751000 49749000 48002000 7520 1837 8583 19169;19170 18511 18511 703 3483 1 YVFQSENTFCSGDHVSWHSPLDNSESR ELMQGLARYVFQSENT PLDNSESRIQHMLLTE R Y V S R I 0 1 2 2 1 1 2 1 2 0 1 0 0 2 1 6 1 1 1 2 0 0 27 0 3184.3581 Q9UMX1 Q9UMX1 147 173 SUFU Suppressor of fused homolog yes yes 3 0.027777 48.984 By MS/MS 1 0 0 0 7521 3055 8584 19171 18512 18512 6450;6451 1 YVISDEEEEDDD KANKKHKKYVISDEEE DEEEEDDD________ K Y V D D - 0 0 0 4 0 0 4 0 0 1 0 0 0 0 0 1 0 0 1 1 0 0 12 0 1456.5365 Q8WVC0 Q8WVC0 655 666 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 6.1838E-11 147.74 By MS/MS By MS/MS 1 1 28569000 10632000 17937000 7522 2559 8585 19172;19173 18513;18514 18514 5231 2 YVLGQLVGLNSPNSILK KGTTEEMKYVLGQLVG NSPNSILKAAKTLYEH K Y V L K A 0 0 2 0 0 1 0 2 0 1 4 1 0 0 1 2 0 0 1 2 0 0 17 0 1814.0302 P33981 P33981 811 827 TTK Dual specificity protein kinase TTK yes yes 2 4.7747E-42 172.37 By MS/MS By MS/MS 1 1 42930000 24875000 18055000 7523 1789 8586 19174;19175 18515;18516 18515 3377 2 YVPLADVK FSSKYVPKYVPLADVK YVPLADVKSEKTKKGR K Y V V K S 1 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 2 0 0 8 0 903.50657 G5E972;P42167;H0YJH7 G5E972 354 361 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2 0.024667 78.77 By matching By MS/MS 1 1 13297000 6836300 6461100 7524 1097 8587 19176;19177 18517 18517 1 YVSGSSPDLVTR DLASHRHKYVSGSSPD SSPDLVTRKVQLSVKT K Y V T R K 0 1 0 1 0 0 0 1 0 0 1 0 0 0 1 3 1 0 1 2 0 0 12 0 1279.6408 Q15678 Q15678 589 600 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 0.00053676 110.15 By MS/MS By MS/MS 2 2 78327000 35770000 42558000 7525 2150 8588;8589 19178;19179;19180;19181 18518;18519;18520 18518 4271;4272 3 YVSMTIKGVTSEDSGK SVKVEQAKYVSMTIKG VTSEDSGKYSINIKNK K Y V G K Y 0 0 0 1 0 0 1 2 0 1 0 2 1 0 0 3 2 0 1 2 0 0 16 1 1700.8291 E7EWH9;A0A0J9YVV7;P54296 E7EWH9 825 840 MYOM2 Myomesin-2 yes no 2 0.014495 54.953 By matching By MS/MS 1 1 12923000 5071900 7850900 7526 367 8590 19182;19183 18521 18521 675;6939;8035 1 YVVLCESPQDK LLIESLEKYVVLCESP LCESPQDKRTLLVNCQ K Y V D K R 0 0 0 1 1 1 1 0 0 0 1 1 0 0 1 1 0 0 1 2 0 0 11 0 1336.6333 Q8TC07;F8VV61;C9JA93 Q8TC07 180 190 TBC1D15 TBC1 domain family member 15 no no 2 0.016195 50.034 By MS/MS By matching 1 1 11002000 5388700 5613500 7527 2535;652 8591 19184;19185 18522 18522 8090 0 YVWLVYEQDRPLK PKGTGLHRYVWLVYEQ YEQDRPLKCDEPILSN R Y V L K C 0 1 0 1 0 1 1 0 0 0 2 1 0 0 1 0 0 1 2 2 0 0 13 1 1707.8984 P30086 P30086 120 132 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 3 0.0013035 106.67 By MS/MS 1 0 0 0 7528 1779 8592 19186 18523 18523 1 YWCVTATR LLPKVLQKYWCVTATR YWCVTATRVAPERLFG K Y W T R V 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 1 1 1 0 0 8 0 1055.4859 O96006 O96006 608 615 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 2 0.018636 53.351 By MS/MS 1 0 0 0 7529 1615 8593 19187 18524 18524 8214 1 YYDGWLICEEPTCRNRTR DIRRFIKKYYDGWLIC PTCRNRTRHLPLQFSR K Y Y T R H 0 3 1 1 2 0 2 1 0 1 1 0 0 0 1 0 2 1 2 0 0 0 18 2 2388.0739 A0A087WU64;A6NMQ1;P09884 A0A087WU64 1340 1357 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit yes no 3 0.0038469 63.443 By MS/MS 1 136730000 136730000 0 7530 51 8594 19188 18525 18525 3 6843;7978 1 YYEGYYAAGPGYGGR GYAPNQGRYYEGYYAA AGPGYGGRNDSDPTYG R Y Y G R N 2 1 0 0 0 0 1 5 0 0 0 0 0 0 1 0 0 0 5 0 0 0 15 0 1642.7052 C9JXK9;C9JUT4;A0A087WZF1;Q93052 C9JXK9 133 147 LPP Lipoma-preferred partner yes no 2 0.01066 70.412 By MS/MS 1 3320300 3320300 0 7531 139 8595 19189 18526 18526 7993;7994 0 YYQTDLVNIMKVR AANAHQDRYYQTDLVN LVNIMKVRQTFVI___ R Y Y V R Q 0 1 1 1 0 1 0 0 0 1 1 1 1 0 0 0 1 0 2 2 0 0 13 1 1641.8549 H0YG35 H0YG35 68 80 FCHSD2 yes yes 3 0.024144 53.777 By MS/MS 1 0 0 0 7532 1181 8596 19190 18527 18527 427 1 YYSDSDDELTVEQR HKPYLYSKYYSDSDDE DELTVEQRRQSIAKEK K Y Y Q R R 0 1 0 3 0 1 2 0 0 0 1 0 0 0 0 2 1 0 2 1 0 0 14 0 1718.7271 Q8NFC6 Q8NFC6 480 493 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.018128 60.49 By matching By MS/MS 1 1 8887300 4678000 4209300 7533 2517 8597 19191;19192 18528 18528 5139;5140 0