# Supplementary Material (ESI) for Chemical Communications # This journal is (c) The Royal Society of Chemistry 2010 data_global _journal_name_full Chem.Commun. _journal_coden_Cambridge 0182 _journal_volume ? _journal_page_first ? _journal_year ? _publ_contact_author_name 'Cao, Rong' _publ_contact_author_email rcao@fjirsm.ac.cn _publ_section_title ; Construction of a trigonal bipyramidal cage-based metal-organic framework with hydrophilic pore surface via flexible tetrapodal ligands ; loop_ _publ_author_name 'Tian-Fu Liu' 'Jian Li' 'Xi Lin' 'Rong Cao' # Attachment '- 780176.cif' data_1 _database_code_depnum_ccdc_archive 'CCDC 780176' #TrackingRef '- 780176.cif' _audit_creation_method SHELXL-97 _chemical_name_systematic ; ? ; _chemical_name_common ? _chemical_melting_point ? _chemical_formula_moiety ? _chemical_formula_sum 'C49.50 H36 N0 O19 Zn4' _chemical_formula_weight 1196.26 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Zn Zn 0.2839 1.4301 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' _symmetry_cell_setting trigonal _symmetry_space_group_name_H-M R-3c loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-y, x-y, z' '-x+y, -x, z' 'x-y, -y, -z+1/2' '-x, -x+y, -z+1/2' 'y, x, -z+1/2' 'x+2/3, y+1/3, z+1/3' '-y+2/3, x-y+1/3, z+1/3' '-x+y+2/3, -x+1/3, z+1/3' 'x-y+2/3, -y+1/3, -z+5/6' '-x+2/3, -x+y+1/3, -z+5/6' 'y+2/3, x+1/3, -z+5/6' 'x+1/3, y+2/3, z+2/3' '-y+1/3, x-y+2/3, z+2/3' '-x+y+1/3, -x+2/3, z+2/3' 'x-y+1/3, -y+2/3, -z+7/6' '-x+1/3, -x+y+2/3, -z+7/6' 'y+1/3, x+2/3, -z+7/6' '-x, -y, -z' 'y, -x+y, -z' 'x-y, x, -z' '-x+y, y, z-1/2' 'x, x-y, z-1/2' '-y, -x, z-1/2' '-x+2/3, -y+1/3, -z+1/3' 'y+2/3, -x+y+1/3, -z+1/3' 'x-y+2/3, x+1/3, -z+1/3' '-x+y+2/3, y+1/3, z-1/6' 'x+2/3, x-y+1/3, z-1/6' '-y+2/3, -x+1/3, z-1/6' '-x+1/3, -y+2/3, -z+2/3' 'y+1/3, -x+y+2/3, -z+2/3' 'x-y+1/3, x+2/3, -z+2/3' '-x+y+1/3, y+2/3, z+1/6' 'x+1/3, x-y+2/3, z+1/6' '-y+1/3, -x+2/3, z+1/6' _cell_length_a 26.918(4) _cell_length_b 26.918(4) _cell_length_c 86.67(2) _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 120.00 _cell_volume 54386(17) _cell_formula_units_Z 12 _cell_measurement_temperature 78(2) _cell_measurement_reflns_used 8178 _cell_measurement_theta_min 2.3587 _cell_measurement_theta_max 27.4797 _exptl_crystal_description Block _exptl_crystal_colour Colorless _exptl_crystal_size_max 0.2000 _exptl_crystal_size_mid 0.2000 _exptl_crystal_size_min 0.2000 _exptl_crystal_density_meas ? _exptl_crystal_density_diffrn 0.438 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 7260 _exptl_absorpt_coefficient_mu 0.544 _exptl_absorpt_correction_type Multi-scan _exptl_absorpt_correction_T_max 0.897 _exptl_absorpt_correction_T_min 0.897 _exptl_absorpt_process_details crystalclear _exptl_special_details ; ? ; _diffrn_ambient_temperature 78(2) _diffrn_radiation_wavelength 0.71073 _diffrn_radiation_type MoK\a _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_monochromator graphite _diffrn_measurement_device_type ; Saturn70 (4x4 bin mode) ; _diffrn_detector_area_resol_mean 28.5714 _diffrn_measurement_method CCD_Profile_fitting _diffrn_standards_number none _diffrn_standards_interval_count none _diffrn_standards_interval_time none _diffrn_standards_decay_% none _diffrn_reflns_number 130957 _diffrn_reflns_av_R_equivalents 0.0649 _diffrn_reflns_av_sigmaI/netI 0.0439 _diffrn_reflns_limit_h_min -34 _diffrn_reflns_limit_h_max 34 _diffrn_reflns_limit_k_min -29 _diffrn_reflns_limit_k_max 34 _diffrn_reflns_limit_l_min -112 _diffrn_reflns_limit_l_max 107 _diffrn_reflns_theta_min 2.32 _diffrn_reflns_theta_max 27.45 _reflns_number_total 13777 _reflns_number_gt 8236 _reflns_threshold_expression >2sigma(I) _computing_data_collection 'CrystalClear (Rigaku/MSC Inc., 2005)' _computing_cell_refinement 'CrystalClear (Rigaku/MSC Inc., 2005)' _computing_data_reduction 'CrystalClear (Rigaku/MSC Inc., 2005)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_molecular_graphics 'SHELXL-97 (Sheldrick, 1997)' _computing_publication_material 'SHELXL-97 (Sheldrick, 1997)' _refine_special_details ; Refinement of F^2^ against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F^2^, conventional R-factors R are based on F, with F set to zero for negative F^2^. The threshold expression of F^2^ > 2sigma(F^2^) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F^2^ are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. SQUEEZE routine of PLATON was applied to remove the contributions to the scattering from the disordered solvent molecules. Restraints both on geometry and thermal parameters of disordered atoms were used during the LS refinement (DELU and SIMU functions of SHELXL-97). ; _refine_ls_structure_factor_coef Fsqd _refine_ls_matrix_type full _refine_ls_weighting_scheme calc _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1730P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _atom_sites_solution_hydrogens geom _refine_ls_hydrogen_treatment constr _refine_ls_extinction_method none _refine_ls_extinction_coef ? _refine_ls_number_reflns 13777 _refine_ls_number_parameters 219 _refine_ls_number_restraints 96 _refine_ls_R_factor_all 0.1323 _refine_ls_R_factor_gt 0.0855 _refine_ls_wR_factor_ref 0.2850 _refine_ls_wR_factor_gt 0.2446 _refine_ls_goodness_of_fit_ref 1.038 _refine_ls_restrained_S_all 1.042 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Zn1 Zn 0.0000 0.0000 0.137282(7) 0.0782(2) Uani 1 3 d S . . O1 O 0.06615(13) -0.00152(14) 0.12870(4) 0.1223(10) Uani 1 1 d . . . C1 C 0.1005(2) -0.0134(2) 0.13553(6) 0.1201(14) Uani 1 1 d . . . Zn2 Zn -0.072215(16) -0.064246(17) 0.167142(4) 0.08229(19) Uani 1 1 d . . . O2 O 0.10458(17) -0.01898(17) 0.15042(4) 0.1428(12) Uani 1 1 d . . . C2 C 0.14603(18) -0.01526(19) 0.12605(5) 0.1073(11) Uani 1 1 d U . . O3 O 0.27711(11) -0.01606(11) 0.10124(3) 0.1009(7) Uani 1 1 d . . . C3 C 0.15397(19) 0.0019(2) 0.11083(5) 0.1150(12) Uani 1 1 d U . . H3 H 0.1300 0.0144 0.1063 0.138 Uiso 1 1 calc R . . O4 O 0.43068(11) 0.06626(12) 0.06470(3) 0.1130(8) Uani 1 1 d . . . C4 C 0.19702(18) 0.0011(2) 0.10206(5) 0.1146(12) Uani 1 1 d U . . H4 H 0.2020 0.0125 0.0915 0.138 Uiso 1 1 calc R . . O5 O 0.55197(12) 0.25585(13) 0.01310(3) 0.1138(8) Uani 1 1 d . . . C5 C 0.23184(17) -0.01598(17) 0.10862(4) 0.0971(10) Uani 1 1 d U . . O6 O 0.61331(14) 0.22186(17) 0.01439(5) 0.1466(13) Uani 1 1 d . . . C6 C 0.2235(2) -0.0345(2) 0.12345(6) 0.1271(13) Uani 1 1 d U . . H6 H 0.2469 -0.0481 0.1277 0.153 Uiso 1 1 calc R . . O7 O 0.0000 0.0000 0.15975(4) 0.0712(8) Uani 1 3 d S . . C7 C 0.1809(2) -0.0339(2) 0.13249(5) 0.1277(13) Uani 1 1 d U . . H7 H 0.1759 -0.0460 0.1429 0.153 Uiso 1 1 calc R . . C8 C 0.29692(14) 0.01583(14) 0.08739(4) 0.0840(8) Uani 1 1 d . . . H8A H 0.3009 0.0542 0.0887 0.101 Uiso 1 1 calc R . . H8B H 0.2692 -0.0042 0.0790 0.101 Uiso 1 1 calc R . . C9 C 0.35540(15) 0.02206(15) 0.0833 0.0760(10) Uani 1 2 d S . . C10 C 0.37884(15) 0.06352(15) 0.06961(4) 0.0916(9) Uani 1 1 d . . . H10A H 0.3506 0.0496 0.0611 0.110 Uiso 1 1 calc R . . H10B H 0.3864 0.1021 0.0727 0.110 Uiso 1 1 calc R . . C11 C 0.46036(17) 0.10422(19) 0.05313(5) 0.1148(12) Uani 1 1 d U . . C12 C 0.44540(19) 0.1399(2) 0.04620(6) 0.1223(13) Uani 1 1 d U . . H12 H 0.4112 0.1394 0.0492 0.147 Uiso 1 1 calc R . . C13 C 0.47982(19) 0.1775(2) 0.03461(6) 0.1219(13) Uani 1 1 d U . . H13 H 0.4679 0.2013 0.0296 0.146 Uiso 1 1 calc R . . C14 C 0.53047(18) 0.1808(2) 0.03032(6) 0.1167(13) Uani 1 1 d U . . C15 C 0.5467(2) 0.1443(2) 0.03754(6) 0.1350(15) Uani 1 1 d U . . H15 H 0.5815 0.1458 0.0347 0.162 Uiso 1 1 calc R . . C16 C 0.5116(2) 0.1061(2) 0.04880(6) 0.1354(15) Uani 1 1 d U . . H16 H 0.5223 0.0811 0.0536 0.162 Uiso 1 1 calc R . . C17 C 0.56761(19) 0.2223(2) 0.01848(5) 0.1132(13) Uani 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Zn1 0.0854(3) 0.0854(3) 0.0640(4) 0.000 0.000 0.04270(15) O1 0.122(2) 0.144(2) 0.119(3) 0.0109(18) 0.0243(17) 0.080(2) C1 0.148(4) 0.135(3) 0.104(3) 0.018(3) 0.034(3) 0.091(3) Zn2 0.0869(3) 0.0920(3) 0.0677(3) 0.00295(16) -0.00030(16) 0.0445(2) O2 0.177(3) 0.186(3) 0.113(3) 0.024(2) 0.038(2) 0.127(3) C2 0.116(3) 0.130(3) 0.095(3) 0.021(2) 0.028(2) 0.076(2) O3 0.1118(17) 0.1178(17) 0.0816(16) 0.0156(13) 0.0276(13) 0.0639(14) C3 0.112(3) 0.157(3) 0.093(3) 0.012(2) 0.016(2) 0.080(2) O4 0.1032(17) 0.1250(19) 0.118(2) 0.0383(16) 0.0370(15) 0.0624(15) C4 0.115(3) 0.156(3) 0.084(2) 0.009(2) 0.0168(19) 0.076(2) O5 0.114(2) 0.1159(19) 0.105(2) 0.0250(16) 0.0087(15) 0.0527(17) C5 0.110(2) 0.117(2) 0.081(2) 0.0086(18) 0.0246(18) 0.068(2) O6 0.121(2) 0.172(3) 0.153(3) 0.062(3) 0.051(2) 0.077(2) C6 0.147(3) 0.163(3) 0.109(3) 0.026(3) 0.034(3) 0.106(3) O7 0.0753(12) 0.0753(12) 0.063(2) 0.000 0.000 0.0377(6) C7 0.156(3) 0.158(3) 0.100(3) 0.032(2) 0.041(2) 0.102(3) C8 0.089(2) 0.088(2) 0.0688(19) -0.0036(15) 0.0056(15) 0.0395(16) C9 0.0817(18) 0.0817(18) 0.061(2) -0.0019(9) 0.0019(9) 0.038(2) C10 0.089(2) 0.093(2) 0.092(2) 0.0060(18) 0.0132(17) 0.0449(17) C11 0.100(2) 0.127(3) 0.124(3) 0.037(2) 0.026(2) 0.061(2) C12 0.105(3) 0.132(3) 0.134(3) 0.037(3) 0.030(2) 0.063(2) C13 0.106(3) 0.134(3) 0.128(3) 0.042(2) 0.020(2) 0.062(2) C14 0.101(2) 0.122(3) 0.124(3) 0.035(2) 0.025(2) 0.054(2) C15 0.121(3) 0.146(3) 0.151(4) 0.057(3) 0.038(3) 0.077(3) C16 0.123(3) 0.146(3) 0.152(4) 0.058(3) 0.046(3) 0.078(3) C17 0.102(3) 0.120(3) 0.108(3) 0.030(2) 0.015(2) 0.048(2) _geom_special_details ; All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. ; loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Zn1 O7 1.947(4) . ? Zn1 O1 1.949(3) . ? Zn1 O1 1.949(3) 3 ? Zn1 O1 1.949(3) 2 ? O1 C1 1.266(6) . ? C1 O2 1.311(6) . ? C1 C2 1.497(6) . ? Zn2 O2 1.920(3) 3 ? Zn2 O6 1.923(3) 34_545 ? Zn2 O7 1.9541(12) . ? Zn2 O5 1.966(3) 35_445 ? O2 Zn2 1.920(3) 2 ? C2 C3 1.379(6) . ? C2 C7 1.382(6) . ? O3 C5 1.377(4) . ? O3 C8 1.416(4) . ? C3 C4 1.395(5) . ? C3 H3 0.9500 . ? O4 C11 1.368(4) . ? O4 C10 1.425(4) . ? C4 C5 1.358(6) . ? C4 H4 0.9500 . ? O5 C17 1.261(5) . ? O5 Zn2 1.966(3) 29 ? C5 C6 1.356(6) . ? O6 C17 1.286(5) . ? O6 Zn2 1.923(3) 28 ? C6 C7 1.397(6) . ? C6 H6 0.9500 . ? O7 Zn2 1.9541(12) 2 ? O7 Zn2 1.9541(12) 3 ? C7 H7 0.9500 . ? C8 C9 1.538(4) . ? C8 H8A 0.9900 . ? C8 H8B 0.9900 . ? C9 C10 1.534(4) . ? C9 C10 1.534(4) 18_544 ? C9 C8 1.538(4) 18_544 ? C10 H10A 0.9900 . ? C10 H10B 0.9900 . ? C11 C12 1.354(6) . ? C11 C16 1.406(6) . ? C12 C13 1.398(6) . ? C12 H12 0.9500 . ? C13 C14 1.373(6) . ? C13 H13 0.9500 . ? C14 C15 1.405(6) . ? C14 C17 1.478(6) . ? C15 C16 1.390(6) . ? C15 H15 0.9500 . ? C16 H16 0.9500 . ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O7 Zn1 O1 112.44(12) . . ? O7 Zn1 O1 112.44(12) . 3 ? O1 Zn1 O1 106.35(13) . 3 ? O7 Zn1 O1 112.44(12) . 2 ? O1 Zn1 O1 106.35(13) . 2 ? O1 Zn1 O1 106.35(13) 3 2 ? C1 O1 Zn1 128.1(3) . . ? O1 C1 O2 127.1(4) . . ? O1 C1 C2 117.7(4) . . ? O2 C1 C2 114.8(5) . . ? O2 Zn2 O6 115.06(19) 3 34_545 ? O2 Zn2 O7 111.66(15) 3 . ? O6 Zn2 O7 110.67(12) 34_545 . ? O2 Zn2 O5 103.99(14) 3 35_445 ? O6 Zn2 O5 103.84(15) 34_545 35_445 ? O7 Zn2 O5 111.12(10) . 35_445 ? C1 O2 Zn2 129.7(3) . 2 ? C3 C2 C7 119.3(4) . . ? C3 C2 C1 120.4(4) . . ? C7 C2 C1 120.3(4) . . ? C5 O3 C8 117.3(3) . . ? C2 C3 C4 120.4(4) . . ? C2 C3 H3 119.8 . . ? C4 C3 H3 119.8 . . ? C11 O4 C10 116.7(3) . . ? C5 C4 C3 119.8(4) . . ? C5 C4 H4 120.1 . . ? C3 C4 H4 120.1 . . ? C17 O5 Zn2 130.1(3) . 29 ? C6 C5 C4 120.4(3) . . ? C6 C5 O3 115.1(4) . . ? C4 C5 O3 124.6(3) . . ? C17 O6 Zn2 132.5(3) . 28 ? C5 C6 C7 120.9(4) . . ? C5 C6 H6 119.6 . . ? C7 C6 H6 119.6 . . ? Zn1 O7 Zn2 109.15(10) . 2 ? Zn1 O7 Zn2 109.15(10) . 3 ? Zn2 O7 Zn2 109.79(10) 2 3 ? Zn1 O7 Zn2 109.15(10) . . ? Zn2 O7 Zn2 109.79(10) 2 . ? Zn2 O7 Zn2 109.79(10) 3 . ? C2 C7 C6 119.2(4) . . ? C2 C7 H7 120.4 . . ? C6 C7 H7 120.4 . . ? O3 C8 C9 108.3(3) . . ? O3 C8 H8A 110.0 . . ? C9 C8 H8A 110.0 . . ? O3 C8 H8B 110.0 . . ? C9 C8 H8B 110.0 . . ? H8A C8 H8B 108.4 . . ? C10 C9 C10 110.6(4) . 18_544 ? C10 C9 C8 111.22(19) . 18_544 ? C10 C9 C8 106.43(18) 18_544 18_544 ? C10 C9 C8 106.43(18) . . ? C10 C9 C8 111.24(19) 18_544 . ? C8 C9 C8 111.0(4) 18_544 . ? O4 C10 C9 107.8(3) . . ? O4 C10 H10A 110.2 . . ? C9 C10 H10A 110.2 . . ? O4 C10 H10B 110.2 . . ? C9 C10 H10B 110.2 . . ? H10A C10 H10B 108.5 . . ? C12 C11 O4 125.8(4) . . ? C12 C11 C16 119.4(4) . . ? O4 C11 C16 114.7(4) . . ? C11 C12 C13 120.5(4) . . ? C11 C12 H12 119.7 . . ? C13 C12 H12 119.7 . . ? C14 C13 C12 121.2(4) . . ? C14 C13 H13 119.4 . . ? C12 C13 H13 119.4 . . ? C13 C14 C15 118.7(4) . . ? C13 C14 C17 120.7(4) . . ? C15 C14 C17 120.6(4) . . ? C16 C15 C14 119.7(4) . . ? C16 C15 H15 120.1 . . ? C14 C15 H15 120.1 . . ? C15 C16 C11 120.4(4) . . ? C15 C16 H16 119.8 . . ? C11 C16 H16 119.8 . . ? O5 C17 O6 124.7(4) . . ? O5 C17 C14 117.2(4) . . ? O6 C17 C14 118.2(4) . . ? _diffrn_measured_fraction_theta_max 0.996 _diffrn_reflns_theta_full 27.45 _diffrn_measured_fraction_theta_full 0.996 _refine_diff_density_max 1.039 _refine_diff_density_min -0.454 _refine_diff_density_rms 0.060 # SQUEEZE RESULTS loop_ _platon_squeeze_void_nr _platon_squeeze_void_average_x _platon_squeeze_void_average_y _platon_squeeze_void_average_z _platon_squeeze_void_volume _platon_squeeze_void_count_electrons 1 -0.054 -0.065 -0.001 44086.7 1080.9 _platon_squeeze_details ; ;