# Electronic Supplementary Material (ESI) for Medicinal Chemistry Communications # This journal is © The Royal Society of Chemistry 2013 ####################################################################### # # Cambridge Crystallographic Data Centre # CCDC # ####################################################################### # # This CIF contains data from an original supplementary publication # deposited with the CCDC, and may include chemical, crystal, # experimental, refinement, atomic coordinates, # anisotropic displacement parameters and molecular geometry data, # as required by the journal to which it was submitted. # # This CIF is provided on the understanding that it is used for bona # fide research purposes only. It may contain copyright material # of the CCDC or of third parties, and may not be copied or further # disseminated in any form, whether machine-readable or not, # except for the purpose of generating routine backup copies # on your local computer system. # # For further information on the CCDC, data deposition and # data retrieval see: # www.ccdc.cam.ac.uk # # Bona fide researchers may freely download Mercury and enCIFer # from this site to visualise CIF-encoded structures and # to carry out CIF format checking respectively. # ####################################################################### data_ic13737 _database_code_depnum_ccdc_archive 'CCDC 918733' #TrackingRef 'ic13737.cif' _audit_creation_method SHELXL-97 _chemical_name_systematic ; ? ; _chemical_name_common ? _chemical_melting_point ? _chemical_formula_moiety ? _chemical_formula_sum 'C22 H34 N O6 Si' _chemical_formula_weight 436.59 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Si Si 0.2541 0.3302 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' _symmetry_cell_setting Monoclinic _symmetry_space_group_name_H-M C2 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z' _cell_length_a 23.812(7) _cell_length_b 6.6660(7) _cell_length_c 18.297(4) _cell_angle_alpha 90.00 _cell_angle_beta 123.79(3) _cell_angle_gamma 90.00 _cell_volume 2413.8(9) _cell_formula_units_Z 4 _cell_measurement_temperature 295(2) _cell_measurement_reflns_used 3268 _cell_measurement_theta_min 3.7190 _cell_measurement_theta_max 77.3188 _exptl_crystal_description ? _exptl_crystal_colour ? _exptl_crystal_size_max 0.25 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.15 _exptl_crystal_density_meas ? _exptl_crystal_density_diffrn 1.201 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 940 _exptl_absorpt_coefficient_mu 1.155 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_correction_T_min 0.59567 _exptl_absorpt_correction_T_max 1.00000 _exptl_absorpt_process_details ; CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.34d (release 27-02-2009 CrysAlis171 .NET) (compiled Feb 27 2009,15:38:38) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. ; _exptl_special_details ; ? ; _diffrn_ambient_temperature 295(2) _diffrn_radiation_wavelength 1.54178 _diffrn_radiation_type CuK\a _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_monochromator graphite _diffrn_measurement_device_type 'Oxford Diffraction Gemini A' _diffrn_measurement_method CCD _diffrn_detector_area_resol_mean ? _diffrn_standards_number ? _diffrn_standards_interval_count ? _diffrn_standards_interval_time ? _diffrn_standards_decay_% ? _diffrn_reflns_number 6282 _diffrn_reflns_av_R_equivalents 0.0298 _diffrn_reflns_av_sigmaI/netI 0.0209 _diffrn_reflns_limit_h_min -27 _diffrn_reflns_limit_h_max 28 _diffrn_reflns_limit_k_min -6 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_l_min -21 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_theta_min 3.74 _diffrn_reflns_theta_max 68.00 _reflns_number_total 3105 _reflns_number_gt 2861 _reflns_threshold_expression >2sigma(I) _computing_data_collection ; CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.34d (release 27-02-2009 CrysAlis171 .NET) (compiled Feb 27 2009,15:38:38) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. ; _computing_cell_refinement ; CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.34d (release 27-02-2009 CrysAlis171 .NET) (compiled Feb 27 2009,15:38:38) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. ; _computing_data_reduction ; CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.34d (release 27-02-2009 CrysAlis171 .NET) (compiled Feb 27 2009,15:38:38) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. ; _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _refine_special_details ; Refinement of F^2^ against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F^2^, conventional R-factors R are based on F, with F set to zero for negative F^2^. The threshold expression of F^2^ > 2sigma(F^2^) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F^2^ are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. ; _refine_ls_structure_factor_coef Fsqd _refine_ls_matrix_type full _refine_ls_weighting_scheme calc _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1317P)^2^+0.3827P] where P=(Fo^2^+2Fc^2^)/3' _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _atom_sites_solution_hydrogens geom _refine_ls_hydrogen_treatment mixed _refine_ls_extinction_method none _refine_ls_extinction_coef ? _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 0.06(5) _refine_ls_number_reflns 3105 _refine_ls_number_parameters 280 _refine_ls_number_restraints 1 _refine_ls_R_factor_all 0.0612 _refine_ls_R_factor_gt 0.0575 _refine_ls_wR_factor_ref 0.1659 _refine_ls_wR_factor_gt 0.1555 _refine_ls_goodness_of_fit_ref 1.034 _refine_ls_restrained_S_all 1.033 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Si1 Si 0.65901(4) 0.49364(16) 0.59480(6) 0.0588(3) Uani 1 1 d . . . O1 O 0.77819(16) 0.3599(5) 0.9171(2) 0.0736(8) Uani 1 1 d . . . O2 O 0.78312(12) 0.6837(4) 0.88367(17) 0.0619(6) Uani 1 1 d . . . O3 O 0.9331(3) -0.0047(8) 0.9254(3) 0.0670(12) Uani 0.50 1 d P A 1 H3A H 0.9723 -0.0086 0.9682 0.100 Uiso 0.50 1 calc PR A 1 C6 C 0.9038(2) 0.1779(6) 0.9247(3) 0.0700(10) Uani 0.50 1 d P A 1 H6A H 0.9380 0.2820 0.9469 0.084 Uiso 0.50 1 calc PR A 1 H6B H 0.8892 0.1681 0.9646 0.084 Uiso 0.50 1 calc PR A 1 O3' O 0.8859(7) 0.1111(19) 0.9783(7) 0.157(5) Uani 0.50 1 d P A 2 H3' H 0.8622 0.0109 0.9567 0.235 Uiso 0.50 1 calc PR A 2 C6' C 0.9038(2) 0.1779(6) 0.9247(3) 0.0700(10) Uani 0.50 1 d P A 2 H6'A H 0.9286 0.0731 0.9175 0.084 Uiso 0.50 1 calc PR A 2 H6'B H 0.9339 0.2918 0.9521 0.084 Uiso 0.50 1 calc PR A 2 O4 O 0.95230(10) 0.4951(4) 0.84395(15) 0.0589(6) Uani 1 1 d . . . O5 O 0.95963(16) 0.7926(5) 0.7947(2) 0.0886(10) Uani 1 1 d . . . O6 O 0.73947(11) 0.5541(4) 0.64314(15) 0.0604(6) Uani 1 1 d . . . N1 N 0.82006(13) 0.4445(4) 0.83544(17) 0.0503(6) Uani 1 1 d . A . C1 C 0.77588(16) 0.6942(5) 0.7128(2) 0.0546(7) Uani 1 1 d . . . H1A H 0.7464 0.7478 0.7290 0.065 Uiso 1 1 calc R . . H1B H 0.7906 0.8049 0.6929 0.065 Uiso 1 1 calc R . . C2 C 0.83695(14) 0.5977(5) 0.7926(2) 0.0488(7) Uani 1 1 d . . . H2A H 0.8643 0.7025 0.8356 0.059 Uiso 1 1 calc R . . C3 C 0.88163(15) 0.4795(6) 0.7713(2) 0.0548(7) Uani 1 1 d . . . H3B H 0.8748 0.5241 0.7158 0.066 Uiso 1 1 calc R . . C4 C 0.86049(19) 0.2632(6) 0.7661(3) 0.0626(9) Uani 1 1 d . A . H4A H 0.8215 0.2325 0.7078 0.075 Uiso 1 1 calc R . . H4B H 0.8971 0.1734 0.7793 0.075 Uiso 1 1 calc R . . C5 C 0.84325(17) 0.2410(5) 0.8336(2) 0.0580(8) Uani 1 1 d . . . C7 C 0.79261(15) 0.4853(6) 0.8819(2) 0.0547(7) Uani 1 1 d . . . C8 C 0.75325(18) 0.7522(8) 0.9295(3) 0.0691(10) Uani 1 1 d . . . H8A H 0.7741 0.8776 0.9592 0.083 Uiso 1 1 calc R A . H8B H 0.7614 0.6541 0.9736 0.083 Uiso 1 1 calc R . . C9 C 0.67766(17) 0.7825(6) 0.8655(2) 0.0564(8) Uani 1 1 d . A . C10 C 0.6540(2) 0.9640(7) 0.8236(3) 0.0697(10) Uani 1 1 d . . . H10A H 0.6843 1.0669 0.8352 0.084 Uiso 1 1 calc R A . C11 C 0.5857(2) 0.9948(9) 0.7644(3) 0.0828(12) Uani 1 1 d . A . H11A H 0.5703 1.1185 0.7366 0.099 Uiso 1 1 calc R . . C12 C 0.5401(2) 0.8447(9) 0.7462(3) 0.0816(13) Uani 1 1 d . . . H12A H 0.4941 0.8657 0.7056 0.098 Uiso 1 1 calc R A . C13 C 0.5633(2) 0.6619(9) 0.7887(3) 0.0841(13) Uani 1 1 d . A . H13A H 0.5328 0.5601 0.7776 0.101 Uiso 1 1 calc R . . C14 C 0.6319(2) 0.6306(7) 0.8478(3) 0.0742(10) Uani 1 1 d . . . H14A H 0.6474 0.5072 0.8758 0.089 Uiso 1 1 calc R A . C15 C 0.98505(17) 0.6603(6) 0.8477(2) 0.0600(8) Uani 1 1 d . . . C16 C 1.05642(19) 0.6609(8) 0.9263(3) 0.0776(11) Uani 1 1 d . . . H16A H 1.0785 0.7817 0.9266 0.116 Uiso 1 1 calc R . . H16B H 1.0799 0.5468 0.9238 0.116 Uiso 1 1 calc R . . H16C H 1.0567 0.6545 0.9789 0.116 Uiso 1 1 calc R . . C17 C 0.6072(3) 0.7122(11) 0.5873(5) 0.123(3) Uani 1 1 d . . . H17A H 0.6229 0.7580 0.6454 0.184 Uiso 1 1 calc R . . H17B H 0.5607 0.6726 0.5574 0.184 Uiso 1 1 calc R . . H17C H 0.6114 0.8186 0.5552 0.184 Uiso 1 1 calc R . . C18 C 0.6504(3) 0.3032(13) 0.6610(4) 0.129(3) Uani 1 1 d . . . H18A H 0.6642 0.3596 0.7169 0.193 Uiso 1 1 calc R . . H18B H 0.6783 0.1898 0.6699 0.193 Uiso 1 1 calc R . . H18C H 0.6040 0.2612 0.6307 0.193 Uiso 1 1 calc R . . C19 C 0.6329(2) 0.3927(10) 0.4854(3) 0.0838(14) Uani 1 1 d . . . C20 C 0.6824(3) 0.2285(17) 0.4969(6) 0.179(5) Uani 1 1 d . . . H20A H 0.6686 0.1765 0.4403 0.268 Uiso 1 1 calc R . . H20B H 0.6825 0.1221 0.5324 0.268 Uiso 1 1 calc R . . H20C H 0.7270 0.2840 0.5253 0.268 Uiso 1 1 calc R . . C21 C 0.6351(4) 0.5613(17) 0.4304(4) 0.149(4) Uani 1 1 d . . . H21A H 0.6216 0.5099 0.3739 0.223 Uiso 1 1 calc R . . H21B H 0.6803 0.6133 0.4599 0.223 Uiso 1 1 calc R . . H21C H 0.6049 0.6666 0.4230 0.223 Uiso 1 1 calc R . . C22 C 0.5608(3) 0.3115(13) 0.4351(4) 0.115(2) Uani 1 1 d . . . H22A H 0.5490 0.2607 0.3792 0.172 Uiso 1 1 calc R . . H22B H 0.5303 0.4174 0.4263 0.172 Uiso 1 1 calc R . . H22C H 0.5579 0.2054 0.4683 0.172 Uiso 1 1 calc R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Si1 0.0486(4) 0.0670(6) 0.0541(5) -0.0045(5) 0.0243(3) -0.0063(4) O1 0.0838(18) 0.0760(19) 0.0709(16) 0.0096(14) 0.0493(15) -0.0049(15) O2 0.0581(12) 0.0688(17) 0.0642(14) -0.0053(12) 0.0374(11) 0.0011(12) O3 0.072(3) 0.035(2) 0.067(3) 0.002(2) 0.022(2) 0.010(2) C6 0.073(2) 0.051(2) 0.067(2) 0.0023(17) 0.0277(18) 0.0024(17) O3' 0.235(13) 0.114(8) 0.115(7) 0.037(6) 0.094(8) 0.021(9) C6' 0.073(2) 0.051(2) 0.067(2) 0.0023(17) 0.0277(18) 0.0024(17) O4 0.0467(10) 0.0641(14) 0.0612(12) 0.0025(13) 0.0271(9) -0.0016(12) O5 0.0720(17) 0.073(2) 0.098(2) 0.0192(18) 0.0331(16) -0.0072(15) O6 0.0476(10) 0.0745(18) 0.0509(12) -0.0076(11) 0.0223(9) -0.0059(10) N1 0.0507(12) 0.0499(15) 0.0481(13) -0.0012(11) 0.0261(10) -0.0016(11) C1 0.0540(16) 0.0502(18) 0.0523(17) 0.0005(14) 0.0251(14) -0.0038(14) C2 0.0450(13) 0.0489(17) 0.0462(15) -0.0047(13) 0.0214(12) -0.0052(13) C3 0.0505(14) 0.065(2) 0.0498(15) -0.0051(16) 0.0281(12) -0.0011(16) C4 0.0607(18) 0.057(2) 0.066(2) -0.0163(17) 0.0327(17) -0.0030(16) C5 0.0579(17) 0.0441(18) 0.0587(19) -0.0078(15) 0.0242(15) -0.0060(15) C7 0.0471(14) 0.063(2) 0.0487(15) -0.0040(16) 0.0235(12) -0.0058(16) C8 0.0583(19) 0.092(3) 0.0545(19) -0.0099(19) 0.0300(16) 0.007(2) C9 0.0562(17) 0.069(2) 0.0516(17) -0.0057(16) 0.0345(15) -0.0027(16) C10 0.071(2) 0.067(3) 0.083(2) 0.001(2) 0.0494(19) -0.0056(19) C11 0.078(2) 0.082(3) 0.092(3) 0.024(3) 0.050(2) 0.014(2) C12 0.0540(19) 0.107(4) 0.078(3) -0.002(3) 0.0332(19) 0.004(2) C13 0.066(2) 0.092(3) 0.093(3) -0.005(3) 0.043(2) -0.019(2) C14 0.078(2) 0.064(3) 0.080(2) 0.008(2) 0.043(2) -0.004(2) C15 0.0536(17) 0.061(2) 0.067(2) 0.0007(19) 0.0344(16) -0.0012(16) C16 0.0507(17) 0.088(3) 0.081(3) -0.002(2) 0.0287(17) -0.007(2) C17 0.065(3) 0.112(5) 0.158(6) -0.037(5) 0.043(3) 0.005(3) C18 0.116(4) 0.179(7) 0.072(3) 0.007(4) 0.040(3) -0.076(5) C19 0.060(2) 0.131(4) 0.055(2) -0.023(2) 0.0284(17) -0.022(2) C20 0.092(4) 0.251(12) 0.164(7) -0.126(8) 0.052(4) -0.003(6) C21 0.120(4) 0.237(12) 0.067(3) 0.019(5) 0.038(3) -0.050(6) C22 0.076(3) 0.160(6) 0.079(3) -0.036(4) 0.025(2) -0.045(4) _geom_special_details ; All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. ; loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Si1 O6 1.653(2) . ? Si1 C18 1.844(6) . ? Si1 C19 1.861(4) . ? Si1 C17 1.864(6) . ? O1 C7 1.216(5) . ? O2 C7 1.345(5) . ? O2 C8 1.443(4) . ? O3 C6 1.399(7) . ? C6 C5 1.537(5) . ? O4 C15 1.329(5) . ? O4 C3 1.457(4) . ? O5 C15 1.197(5) . ? O6 C1 1.421(4) . ? N1 C7 1.357(4) . ? N1 C5 1.472(4) . ? N1 C2 1.473(4) . ? C1 C2 1.516(5) . ? C2 C3 1.539(5) . ? C3 C4 1.513(6) . ? C4 C5 1.510(6) . ? C8 C9 1.519(5) . ? C9 C10 1.374(6) . ? C9 C14 1.387(6) . ? C10 C11 1.379(6) . ? C11 C12 1.374(7) . ? C12 C13 1.385(8) . ? C13 C14 1.385(6) . ? C15 C16 1.496(5) . ? C19 C22 1.526(6) . ? C19 C21 1.528(9) . ? C19 C20 1.534(10) . ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O6 Si1 C18 109.7(2) . . ? O6 Si1 C19 104.96(16) . . ? C18 Si1 C19 111.4(3) . . ? O6 Si1 C17 111.8(2) . . ? C18 Si1 C17 106.0(4) . . ? C19 Si1 C17 113.1(3) . . ? C7 O2 C8 118.0(3) . . ? O3 C6 C5 114.2(4) . . ? C15 O4 C3 117.0(3) . . ? C1 O6 Si1 126.0(2) . . ? C7 N1 C5 121.1(3) . . ? C7 N1 C2 124.3(3) . . ? C5 N1 C2 114.2(3) . . ? O6 C1 C2 111.4(3) . . ? N1 C2 C1 114.0(3) . . ? N1 C2 C3 102.2(3) . . ? C1 C2 C3 113.6(3) . . ? O4 C3 C4 107.5(3) . . ? O4 C3 C2 110.0(3) . . ? C4 C3 C2 104.5(3) . . ? C5 C4 C3 105.9(3) . . ? N1 C5 C4 101.8(3) . . ? N1 C5 C6 111.4(3) . . ? C4 C5 C6 113.3(3) . . ? O1 C7 O2 124.2(3) . . ? O1 C7 N1 124.8(4) . . ? O2 C7 N1 111.0(3) . . ? O2 C8 C9 110.4(3) . . ? C10 C9 C14 119.2(3) . . ? C10 C9 C8 119.4(4) . . ? C14 C9 C8 121.5(4) . . ? C9 C10 C11 120.6(4) . . ? C12 C11 C10 120.7(5) . . ? C11 C12 C13 119.3(4) . . ? C14 C13 C12 120.0(4) . . ? C13 C14 C9 120.3(4) . . ? O5 C15 O4 123.4(3) . . ? O5 C15 C16 124.7(4) . . ? O4 C15 C16 111.9(3) . . ? C22 C19 C21 107.6(5) . . ? C22 C19 C20 110.5(6) . . ? C21 C19 C20 108.1(7) . . ? C22 C19 Si1 111.6(3) . . ? C21 C19 Si1 109.2(5) . . ? C20 C19 Si1 109.8(4) . . ? _diffrn_measured_fraction_theta_max 0.982 _diffrn_reflns_theta_full 68.00 _diffrn_measured_fraction_theta_full 0.982 _refine_diff_density_max 0.430 _refine_diff_density_min -0.277 _refine_diff_density_rms 0.057