# Electronic Supplementary Material (ESI) for Organic & Biomolecular Chemistry # This journal is © The Royal Society of Chemistry 2013 ####################################################################### # # Cambridge Crystallographic Data Centre # CCDC # ####################################################################### # # This CIF contains data from an original supplementary publication # deposited with the CCDC, and may include chemical, crystal, # experimental, refinement, atomic coordinates, # anisotropic displacement parameters and molecular geometry data, # as required by the journal to which it was submitted. # # This CIF is provided on the understanding that it is used for bona # fide research purposes only. It may contain copyright material # of the CCDC or of third parties, and may not be copied or further # disseminated in any form, whether machine-readable or not, # except for the purpose of generating routine backup copies # on your local computer system. # # For further information on the CCDC, data deposition and # data retrieval see: # www.ccdc.cam.ac.uk # # Bona fide researchers may freely download Mercury and enCIFer # from this site to visualise CIF-encoded structures and # to carry out CIF format checking respectively. # data_c _audit_creation_method SHELXL-97 _chemical_name_systematic ; ? ; _chemical_name_common ? _chemical_melting_point ? _chemical_formula_moiety ? _chemical_formula_sum 'C30 H28 N4 O6 Pd2' _chemical_formula_weight 376.68 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pd Pd 0.1215 3.9337 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' _symmetry_cell_setting monoclinic _symmetry_space_group_name_H-M 'C 2/c' loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' _cell_length_a 16.5855(3) _cell_length_b 15.6566(3) _cell_length_c 14.3263(10) _cell_angle_alpha 90.00 _cell_angle_beta 118.686(8) _cell_angle_gamma 90.00 _cell_volume 3263.5(2) _cell_formula_units_Z 8 _cell_measurement_temperature 295(2) _cell_measurement_reflns_used 19165 _cell_measurement_theta_min 6.70 _cell_measurement_theta_max 68.20 _exptl_crystal_description block _exptl_crystal_colour yellow _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.20 _exptl_crystal_density_meas ? _exptl_crystal_density_diffrn 1.533 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 1504 _exptl_absorpt_coefficient_mu 9.270 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_correction_T_min 0.115 _exptl_absorpt_correction_T_max 0.155 _exptl_absorpt_process_details 'Jacobson, R. (1998) Private communication' _exptl_special_details ; ? ; _diffrn_ambient_temperature 295(2) _diffrn_radiation_wavelength 1.54178 _diffrn_radiation_type CuK\a _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_monochromator graphite _diffrn_measurement_device_type 'Rigaku Saturn944+ CCD' _diffrn_measurement_method \w _diffrn_detector_area_resol_mean ? _diffrn_standards_number ? _diffrn_standards_interval_count ? _diffrn_standards_interval_time ? _diffrn_standards_decay_% ? _diffrn_reflns_number 20138 _diffrn_reflns_av_R_equivalents 0.0447 _diffrn_reflns_av_sigmaI/netI 0.0259 _diffrn_reflns_limit_h_min -19 _diffrn_reflns_limit_h_max 19 _diffrn_reflns_limit_k_min -18 _diffrn_reflns_limit_k_max 18 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_theta_min 6.66 _diffrn_reflns_theta_max 68.21 _reflns_number_total 2957 _reflns_number_gt 2708 _reflns_threshold_expression >2\s(I) _computing_data_collection 'CrystalClear-SM Auto 2.0 r4 (Rigaku, 2009)' _computing_cell_refinement 'CrystalClear-SM Auto 2.0 r4' _computing_data_reduction 'CrystalClear-SM Auto 2.0 r4' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_molecular_graphics 'CrystalStructure 4.0' _computing_publication_material 'CrystalStructure 4.0 (Rigaku, 2009)' _refine_special_details ; Refinement of F^2^ against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F^2^, conventional R-factors R are based on F, with F set to zero for negative F^2^. The threshold expression of F^2^ > 2\s(F^2^) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F^2^ are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. ; _refine_ls_structure_factor_coef Fsqd _refine_ls_matrix_type full _refine_ls_weighting_scheme calc _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.2000P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _atom_sites_solution_hydrogens geom _refine_ls_hydrogen_treatment mixed _refine_ls_extinction_method none _refine_ls_extinction_coef ? _refine_ls_number_reflns 2957 _refine_ls_number_parameters 192 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.0982 _refine_ls_R_factor_gt 0.0896 _refine_ls_wR_factor_ref 0.3543 _refine_ls_wR_factor_gt 0.3222 _refine_ls_goodness_of_fit_ref 1.751 _refine_ls_restrained_S_all 1.751 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Pd1 Pd 0.95042(4) 0.02530(3) 0.81582(5) 0.0404(5) Uani 1 1 d . . . O1 O 1.0615(5) -0.0507(5) 0.9054(6) 0.0582(17) Uani 1 1 d . . . O2 O 0.8859(4) -0.0701(3) 0.7098(6) 0.0511(16) Uani 1 1 d . . . O3 O 0.8070(7) 0.2448(5) 0.7544(8) 0.094(3) Uani 1 1 d . . . N1 N 0.9987(5) 0.1218(5) 0.9196(5) 0.0459(17) Uani 1 1 d . . . N2 N 0.8448(5) 0.1061(5) 0.7429(6) 0.0471(16) Uani 1 1 d . . . C1 C 0.8839(6) -0.0817(6) 0.6207(9) 0.052(2) Uani 1 1 d . . . C2 C 1.0772(7) 0.1205(7) 1.0111(8) 0.055(2) Uani 1 1 d . . . H2 H 1.1125 0.0711 1.0327 0.067 Uiso 1 1 calc R . . C3 C 1.1062(8) 0.1941(10) 1.0744(8) 0.074(4) Uani 1 1 d . . . H3 H 1.1616 0.1935 1.1376 0.089 Uiso 1 1 calc R . . C4 C 1.0553(9) 0.2650(8) 1.0451(8) 0.068(3) Uani 1 1 d . . . H4 H 1.0746 0.3137 1.0875 0.081 Uiso 1 1 calc R . . C5 C 0.9710(9) 0.2648(7) 0.9480(11) 0.071(3) Uani 1 1 d . . . H5 H 0.9349 0.3137 0.9248 0.085 Uiso 1 1 calc R . . C6 C 0.9433(7) 0.1890(6) 0.8878(8) 0.053(2) Uani 1 1 d . . . C7 C 0.8563(6) 0.1837(6) 0.7859(8) 0.053(2) Uani 1 1 d . . . C10 C 0.7651(6) 0.0905(6) 0.6419(7) 0.0480(19) Uani 1 1 d . . . C11 C 0.6998(7) 0.0310(5) 0.6345(11) 0.053(3) Uani 1 1 d . . . C12 C 0.6266(9) 0.0143(7) 0.5355(12) 0.065(3) Uani 1 1 d . . . H12 H 0.5827 -0.0254 0.5297 0.078 Uiso 1 1 calc R . . C13 C 0.6166(9) 0.0537(8) 0.4463(9) 0.071(3) Uani 1 1 d . . . H13 H 0.5667 0.0408 0.3805 0.085 Uiso 1 1 calc R . . C14 C 0.6828(8) 0.1150(7) 0.4537(8) 0.063(3) Uani 1 1 d . . . H14 H 0.6770 0.1418 0.3928 0.075 Uiso 1 1 calc R . . C15 C 0.7585(7) 0.1351(7) 0.5556(8) 0.056(2) Uani 1 1 d . . . H15 H 0.8014 0.1766 0.5633 0.068 Uiso 1 1 calc R . . C16 C 0.7088(9) -0.0144(9) 0.7347(11) 0.070(3) Uani 1 1 d . . . H16A H 0.7374 0.0234 0.7947 0.104 Uiso 1 1 calc R . . H16B H 0.7458 -0.0648 0.7482 0.104 Uiso 1 1 calc R . . H16C H 0.6489 -0.0301 0.7237 0.104 Uiso 1 1 calc R . . C17 C 0.8079(9) -0.1346(9) 0.5427(12) 0.092(5) Uani 1 1 d . . . H17A H 0.8257 -0.1601 0.4944 0.137 Uiso 1 1 calc R . . H17B H 0.7546 -0.0995 0.5036 0.137 Uiso 1 1 calc R . . H17C H 0.7939 -0.1787 0.5793 0.137 Uiso 1 1 calc R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Pd1 0.0323(7) 0.0398(7) 0.0461(7) 0.00459(19) 0.0164(5) 0.00113(17) O1 0.047(4) 0.066(4) 0.055(4) 0.018(4) 0.020(3) 0.009(4) O2 0.040(3) 0.037(3) 0.070(4) -0.001(3) 0.021(3) -0.002(2) O3 0.090(7) 0.060(5) 0.086(6) -0.020(4) 0.006(5) 0.028(5) N1 0.045(4) 0.061(4) 0.031(3) 0.000(3) 0.018(3) -0.010(3) N2 0.039(4) 0.040(4) 0.058(4) -0.003(3) 0.019(3) -0.004(3) C1 0.035(4) 0.045(5) 0.069(6) -0.011(4) 0.018(4) 0.001(3) C2 0.046(5) 0.064(6) 0.056(5) 0.003(4) 0.024(4) -0.008(4) C3 0.052(6) 0.119(11) 0.045(5) -0.018(6) 0.018(4) -0.046(7) C4 0.087(8) 0.053(6) 0.049(5) -0.017(5) 0.021(5) -0.030(6) C5 0.074(8) 0.037(5) 0.089(8) -0.012(5) 0.028(6) -0.015(5) C6 0.053(5) 0.048(5) 0.055(5) -0.004(4) 0.023(4) -0.004(4) C7 0.051(5) 0.041(5) 0.057(5) -0.006(4) 0.018(4) 0.004(4) C10 0.045(5) 0.048(4) 0.047(5) -0.005(4) 0.019(4) 0.002(4) C11 0.035(5) 0.048(5) 0.076(7) 0.004(4) 0.027(5) 0.002(3) C12 0.045(6) 0.058(6) 0.082(8) -0.010(5) 0.023(6) -0.006(4) C13 0.061(7) 0.075(7) 0.052(6) -0.009(6) 0.007(5) 0.010(6) C14 0.059(6) 0.065(6) 0.057(6) 0.002(5) 0.021(5) 0.018(5) C15 0.058(6) 0.060(6) 0.052(5) 0.004(4) 0.027(5) 0.016(4) C16 0.056(7) 0.084(9) 0.065(7) 0.010(5) 0.026(6) -0.007(5) C17 0.070(8) 0.094(9) 0.106(10) -0.055(8) 0.039(8) -0.041(7) _geom_special_details ; All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. ; loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Pd1 N1 1.998(7) . ? Pd1 N2 2.002(7) . ? Pd1 O2 2.030(6) . ? Pd1 O1 2.046(7) . ? Pd1 Pd1 3.0396(12) 2_756 ? O1 C1 1.233(13) 2_756 ? O2 C1 1.275(13) . ? O3 C7 1.197(12) . ? N1 C6 1.326(12) . ? N1 C2 1.332(13) . ? N2 C7 1.333(12) . ? N2 C10 1.437(12) . ? C1 O1 1.233(13) 2_756 ? C1 C17 1.474(14) . ? C2 C3 1.401(17) . ? C2 H2 0.9300 . ? C3 C4 1.336(19) . ? C3 H3 0.9300 . ? C4 C5 1.422(17) . ? C4 H4 0.9300 . ? C5 C6 1.408(14) . ? C5 H5 0.9300 . ? C6 C7 1.484(14) . ? C10 C15 1.378(14) . ? C10 C11 1.393(14) . ? C11 C12 1.378(18) . ? C11 C16 1.544(18) . ? C12 C13 1.356(19) . ? C12 H12 0.9300 . ? C13 C14 1.424(19) . ? C13 H13 0.9300 . ? C14 C15 1.430(15) . ? C14 H14 0.9300 . ? C15 H15 0.9300 . ? C16 H16A 0.9600 . ? C16 H16B 0.9600 . ? C16 H16C 0.9600 . ? C17 H17A 0.9600 . ? C17 H17B 0.9600 . ? C17 H17C 0.9600 . ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag N1 Pd1 N2 81.3(3) . . ? N1 Pd1 O2 172.7(3) . . ? N2 Pd1 O2 93.4(3) . . ? N1 Pd1 O1 93.1(3) . . ? N2 Pd1 O1 173.8(3) . . ? O2 Pd1 O1 92.0(3) . . ? N1 Pd1 Pd1 108.6(2) . 2_756 ? N2 Pd1 Pd1 106.0(2) . 2_756 ? O2 Pd1 Pd1 77.5(2) . 2_756 ? O1 Pd1 Pd1 78.3(2) . 2_756 ? C1 O1 Pd1 127.6(7) 2_756 . ? C1 O2 Pd1 127.2(6) . . ? C6 N1 C2 122.6(8) . . ? C6 N1 Pd1 112.4(6) . . ? C2 N1 Pd1 125.1(7) . . ? C7 N2 C10 118.6(8) . . ? C7 N2 Pd1 116.1(6) . . ? C10 N2 Pd1 124.7(6) . . ? O1 C1 O2 125.3(9) 2_756 . ? O1 C1 C17 118.5(11) 2_756 . ? O2 C1 C17 116.2(10) . . ? N1 C2 C3 119.7(10) . . ? N1 C2 H2 120.2 . . ? C3 C2 H2 120.2 . . ? C4 C3 C2 120.7(10) . . ? C4 C3 H3 119.6 . . ? C2 C3 H3 119.6 . . ? C3 C4 C5 118.8(10) . . ? C3 C4 H4 120.6 . . ? C5 C4 H4 120.6 . . ? C6 C5 C4 118.7(11) . . ? C6 C5 H5 120.7 . . ? C4 C5 H5 120.7 . . ? N1 C6 C5 119.4(9) . . ? N1 C6 C7 118.7(8) . . ? C5 C6 C7 121.8(9) . . ? O3 C7 N2 129.3(9) . . ? O3 C7 C6 119.5(8) . . ? N2 C7 C6 111.2(8) . . ? C15 C10 C11 123.1(10) . . ? C15 C10 N2 117.1(9) . . ? C11 C10 N2 119.8(9) . . ? C12 C11 C10 118.3(11) . . ? C12 C11 C16 120.9(10) . . ? C10 C11 C16 120.8(11) . . ? C13 C12 C11 122.2(11) . . ? C13 C12 H12 118.9 . . ? C11 C12 H12 118.9 . . ? C12 C13 C14 119.7(10) . . ? C12 C13 H13 120.2 . . ? C14 C13 H13 120.2 . . ? C13 C14 C15 119.5(10) . . ? C13 C14 H14 120.3 . . ? C15 C14 H14 120.3 . . ? C10 C15 C14 117.2(10) . . ? C10 C15 H15 121.4 . . ? C14 C15 H15 121.4 . . ? C11 C16 H16A 109.5 . . ? C11 C16 H16B 109.5 . . ? H16A C16 H16B 109.5 . . ? C11 C16 H16C 109.5 . . ? H16A C16 H16C 109.5 . . ? H16B C16 H16C 109.5 . . ? C1 C17 H17A 109.5 . . ? C1 C17 H17B 109.5 . . ? H17A C17 H17B 109.5 . . ? C1 C17 H17C 109.5 . . ? H17A C17 H17C 109.5 . . ? H17B C17 H17C 109.5 . . ? _diffrn_measured_fraction_theta_max 0.990 _diffrn_reflns_theta_full 68.21 _diffrn_measured_fraction_theta_full 0.990 _refine_diff_density_max 5.967 _refine_diff_density_min -1.187 _refine_diff_density_rms 0.299 _database_code_depnum_ccdc_archive 'CCDC 969094'