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{"sheet":"README","index":0,"n_rows":25,"n_cols":2,"rows_kept":25,"cut":false,"hidden":false,"merged":[],"flags":["formulas_cached_only"]}
["Data set S5"]
[]
["This data set describes the metabolic network model used."]
[]
["Reactions"]
["Annotations of the reaction identifiers, based on the Recon. 1 model (Duarte et al, PNAS 2007)"]
[]
["Metabolite"]
["Annotations of the metabolite identifiers, based on the Recon. 1 model (Duarte et al, PNAS 2007)"]
[]
["Stoichiometry"]
["This worksheet describes the metabolite network stoichiometry. Columns are as follows:"]
[]
["Reaction ID","Unique reaction identifier"]
["Stoichiometry","Reaction stoichiometry. Metabolite compartment is indicated by suffix  _c for cytosol, _m for mitochondria. Irreversible reactions are denoted ==>, reversible are denoted <=>"]
["Atom map","1 if reactions carries atoms that are being traced (carbon or nitrogen), 0 otherwise."]
[]
["Atom map"]
["This worksheet describes the carbon and nitrogen atom maps. Columns are as follows:"]
[]
["Reaction ID","Unique reaction identifier"]
["Index","For metabolites with stoichiometry > 1, this index identifies each molecule"]
["Metabolite","Unique metabolite identifier"]
["Element","Carbon (C) or nitrogen (N)"]
["Atom number","Integers identifying individual atoms, starting at 1 (numbering is arbitrary)"]

{"sheet":"Reactions","index":1,"n_rows":126,"n_cols":5,"rows_kept":126,"cut":false,"hidden":false,"merged":[],"flags":["formulas_cached_only"]}
["Reaction ID","Description","EC number","Artificial","Transporter"]
["ACITL","ATP-Citratelyase","2.3.3.8"]
["ACOAHi","acetyl-CoAhydrolase","3.1.2.1"]
["ACONTm","Aconitatehydratase","4.2.1.3"]
["ACSm","acetyl-CoAsynthetase","6.2.1.1"]
["ADK1","adenylatekinase","2.7.4.3"]
["ADK1m","adenylatekinase,mitochondrial","2.7.4.3"]
["ADSL1","adenylosuccinatelyase","4.3.2.2"]
["ADSL2","adenylosuccinatelyase","4.3.2.2"]
["ADSS","adenylosuccinatesynthase","6.3.4.4"]
["AICART","phosphoribosylaminoimidazolecarboxamideformyltransferase","2.1.2.3"]
["AIRCr","phosphoribosylaminoimidazolecarboxylase","4.1.1.21"]
["AKGDm","2-oxoglutaratedehydrogenase","1.2.4.2"]
["AKGtm","alpha-ketoglutarate transport, mitochondiral",null,null,1]
["AKG_OX","alpha-ketoglutarate oxidation to succinate (artifical)",null,1]
["ALATA_L","L-alaninetransaminase","2.6.1.2"]
["ARGN","arginase","3.5.3.1"]
["ARGSL","argininosuccinatelyase","4.3.2.1"]
["ARGSS","argininosuccinatesynthase","6.3.4.5"]
["ASNS1","asparaginesynthase(glutamine-hydrolysing)","6.3.5.4"]
["ASPCTr","aspartatecarbamoyltransferase(reversible)","2.1.3.2"]
["ASPTA","aspartatetransaminase","2.6.1.1"]
["ASPTAm","aspartatetransaminase","2.6.1.1"]
["ASPtm","Aspartate mitochondrial transport",null,null,1]
["ATPS4m","ATPsynthase(fourprotonsforoneATP)","3.6.3.14"]
["ATPtm","ADP/ATPtransporter,mitochondrial",null,null,1]
["CBPS","carbamoyl-phosphatesynthase(glutamine-hydrolysing)","6.3.5.5"]
["CBPSam","carbamoyl-phosphatesynthase(ammonia, mitochondrial)","6.3.4.16"]
["CELLWORK","Cell work reaction (artificial)",null,1]
["CITtm","mitochondrial citrate transport",null,null,1]
["CO2tm","CO2transport(diffusion),mitochondrial",null,null,1]
["CSm","citratesynthase","2.3.3.1"]
["CTPS2","CTPsynthase(glutamine)","6.3.4.2"]
["CYOOm","Cytochrome oxidase (Complex IV), simplified"]
["CYOR-u10m","ubiquinol-6cytochromecreductase,ComplexIII","1.10.2.2"]
["DHORD9","dihydooroticaciddehydrogenase(quinone10)","1.3.5.2"]
["DHORTS","dihydroorotase","3.5.2.3"]
["DHPR","6,7-dihydropteridinereductase"]
["ENO","enolase","4.2.1.11"]
["FBA","fructose-bisphosphatealdolase","4.1.2.13"]
["FTHFL","formate-tetrahydrofolateligase","6.3.4.3"]
["FUMm","fumarase,mitochondrial","4.2.1.2"]
["FUMtm","fumaratetransport,mitochondrial",null,null,1]
["G5SADs","L-glutamate5-semialdehydedehydratase(spontaneous)"]
["G5SD","glutamate-5-semialdehydedehydrogenase, cytosolic","1.2.1.41"]
["G6PDH2r","glucose6-phosphatedehydrogenase","1.1.1.49"]
["GALU","UTP-glucose-1-phosphateuridylyltransferase","2.7.7.9"]
["GAPD","glyceraldehyde-3-phosphatedehydrogenase","1.2.1.12"]
["GARFT","phosphoribosylglycinamideformyltransferase","2.1.2.2"]
["GK1","guanylatekinase(GMP:ATP)","2.7.4.8"]
["GLNtm","L-glutaminetransportviaelectroneutraltransporter",null,null,1]
["GLU5K","glutamate5-kinase, cytosolic","2.7.2.11"]
["GLUCYS","gamma-glutamylcysteinesynthetase","6.3.2.2"]
["GLUDxm","glutamatedehydrogenase(NAD)(mitochondrial)","1.4.1.2"]
["GLUNm","glutaminase(mitochondrial)","3.5.1.2"]
["GLUPRT","glutaminephosphoribosyldiphosphateamidotransferase","2.4.2.14"]
["GLUt2m","L-glutamatereversibletransportviaprotonsymport,mitochondrial",null,null,1]
["GLU_AKG_AT","Generic glutamate-alphaketoglutarate aminotransferase (artificial)",null,1]
["GLYCOGEN_SYNTH","Glycogen synthesis (artificial)",null,1]
["GMPS2","GMPsynthase","6.3.5.2"]
["GND","phosphogluconatedehydrogenase","1.1.1.44"]
["GTHS","glutathionesynthetase","6.3.2.3"]
["H2Otm","H2Otransport,mitochondrial",null,null,1]
["HCO3E","HCO3 equilibration reaction, cytosolic"]
["HCO3Em","HCO3 equilibration reaction, mitochondrial"]
["HEX1","hexokinase(D-glucose:ATP)","2.7.1.1"]
["Htm2","Hydrogen transport, mitochondrial",null,null,1]
["HXPRT","hypoxanthinephosphoribosyltransferase(Hypoxanthine)","2.4.2.8"]
["ICDHxm","Isocitratedehydrogenase(NAD+)","1.1.1.41"]
["IMPC","IMPcyclohydrolase","3.5.4.10"]
["IMPD","IMPdehydrogenase","1.1.1.205"]
["LDH_L","L-lactatedehydrogenase","1.1.1.27"]
["MALtm","malatetransport,mitochondrial",null,null,1]
["MDH","malatedehydrogenase","1.1.1.37"]
["MDHm","malatedehydrogenase,mitochondrial","1.1.1.37"]
["ME1m","malicenzyme(NAD),mitochondrial","1.1.1.38"]
["NADH2-u10m","NADHdehydrogenase,mitochondrial","1.6.99.3"]
["NADH_REDOX","Oxidation of NADH, artificial",null,1]
["NADPH_REDOX","Oxidation of NADPH, artificial",null,1]
["NDPK1","nucleoside-diphosphatekinase(ATP:GDP)","2.7.4.6"]
["NDPK2","nucleoside-diphosphatekinase(ATP:UDP)","2.7.4.6"]
["NH4tm","Ammonium ion transport into mitochondria",null,null,1]
["O2tm","O2transport(diffusion)",null,null,1]
["OAAtm","Mitochondrial oxaloacetate transport",null,null,1]
["OAT","ornithine aminotransferase, cytosolic","2.6.1.13"]
["OCBTm","ornithinecarbamoyltransferase,irreversible","2.1.3.3"]
["OMPDC","orotidine-5'-phosphatedecarboxylase","4.1.1.23"]
["ORNt4m","ornithinemitochondrialtransportexchangewithcitruline",null,null,1]
["ORPT","orotatephosphoribosyltransferase","2.4.2.10"]
["P5CR","pyrroline-5-carboxylatereductase","1.5.1.2"]
["PCm","pyruvatecarboxylase","6.4.1.1"]
["PDHm","pyruvatedehydrogenase","1.2.4.1"]
["PFK","phosphofructokinase","2.7.1.11"]
["PGCD","phosphoglyceratedehydrogenase","1.1.1.95"]
["PGI","glucose-6-phosphateisomerase","5.3.1.9"]
["PGK","phosphoglyceratekinase","2.7.2.3"]
["PGL","6-phosphogluconolactonase","3.1.1.31"]
["PGM","phosphoglyceratemutase","5.4.2.1"]
["PGMT","phosphoglucomutase","5.4.2.2"]
["PHETHPTOX2","L-Phenylalanine,tetrahydrobiopterin:oxygenoxidoreductase(4-hydroxylating)","1.14.16.1"]
["PIt2m","phosphatetransporter,mitochondrial",null,null,1]
["PPA","inorganicdiphosphatase","3.6.1.1"]
["PPAm","inorganicdiphosphatase","3.6.1.1"]
["PRAGSr","phosphoribosylglycinamidesynthase","6.3.4.13"]
["PRAIS","phosphoribosylaminoimidazolesynthase","6.3.3.1"]
["PRASCS","phosphoribosylaminoimidazolesuccinocarboxamidesynthase","6.3.2.6"]
["PRFGS","phosphoribosylformylglycinamidinesynthase","6.3.5.3"]
["PROT_SYNTH_INT","Protein synthesis reaction, integer stoichimetry (artificial)",null,1]
["PRPPS","phosphoribosylpyrophosphatesynthetase","2.7.6.1"]
["PSERT","phosphoserinetransaminase","2.6.1.52"]
["PSP_L","phosphoserinephosphatase(L-serine)","3.1.3.3"]
["PYK","pyruvatekinase","2.7.1.40"]
["PYRt2m","pyruvatemitochondrialtransportviaprotonsymport",null,null,1]
["RNA_SYNTH_INT","RNA synthesis, integer stoichiometry (artificial)",null,1]
["RPE","ribulose5-phosphate3-epimerase","5.1.3.1"]
["RPI","ribose-5-phosphateisomerase","5.3.1.6"]
["SUCC_OX","Succinate oxidation (artificial)",null,1]
["SUCD1m","succinatedehydrogenase","1.3.99.1"]
["SUCOASm","Succinate--CoAligase(ADP-forming)","6.2.1.5"]
["TALA","transaldolase","2.2.1.2"]
["THBPT4ACAMDASE","Tetrahydrobiopterin-4a-carbinolaminedehydratase","4.2.1.96"]
["TKT1","transketolase","2.2.1.1"]
["TKT2","transketolase","2.2.1.1"]
["TPI","triose-phosphateisomerase","5.3.1.1"]
["UMPK","UMPkinase","2.7.4.14"]
["UPRT","uracil phosphoribosyltransferase, cytosolic","2.4.2.9"]

{"sheet":"Metabolites","index":2,"n_rows":122,"n_cols":4,"rows_kept":122,"cut":false,"hidden":false,"merged":[],"flags":["formulas_cached_only"]}
["Metabolite ID","Description","KEGG ID","Artificial"]
["10fthf","10-Formyltetrahydrofolate","C00234",0]
["13dpg","3-Phospho-D-glyceroyl phosphate","C00236",0]
["1pyr5c","1-Pyrroline-5-carboxylate","C03912",0]
["25aics","(S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate","C04823",0]
["2pg","D-Glycerate 2-phosphate","C00631",0]
["3pg","3-Phospho-D-glycerate","C00197",0]
["3php","3-Phosphohydroxypyruvate","C03232",0]
["5aizc","5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate","C04751",0]
["6pgc","6-Phospho-D-gluconate","C00345",0]
["6pgl","6-phospho-D-glucono-1,5-lactone","C01236",0]
["ac","Acetate","C00033",0]
["accoa","Acetyl-CoA","C00024",0]
["adp","ADP","C00008",0]
["aicar","5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide","C04677",0]
["air","5-amino-1-(5-phospho-D-ribosyl)imidazole","C03373",0]
["akg","2-Oxoglutarate","C00026",0]
["ala-L","L-Alanine","C00041",0]
["amine_nh4","Amine group (artificial)",null,1]
["amp","AMP","C00020",0]
["arg-L","L-Arginine","C00062",0]
["argsuc","N(omega)-(L-Arginino)succinate","C03406",0]
["asn-L","L-Asparagine","C00152",0]
["asp-L","L-Aspartate","C00049",0]
["atp","ATP","C00002",0]
["cbasp","N-Carbamoyl-L-aspartate","C00438",0]
["cbp","Carbamoyl phosphate","C00169",0]
["cit","Citrate","C00158",0]
["citr-L","L-Citrulline","C00327",0]
["co2","CO2","C00011",0]
["coa","Coenzyme A","C00010",0]
["ctp","CTP","C00063",0]
["cys-L","L-Cysteine","C00097",0]
["dcamp","N6-(1,2-Dicarboxyethyl)-AMP","C03794",0]
["dhap","Dihydroxyacetone phosphate","C00111",0]
["dhbpt","6,7-Dihydrobiopterin","C00268",0]
["dhor-S","(S)-Dihydroorotate","C00337",0]
["e4p","D-Erythrose 4-phosphate","C00279",0]
["energy","energy (artifical, from ATP hydrolysis)",null,1]
["f6p","D-Fructose 6-phosphate","C00085",0]
["fdp","D-Fructose 1,6-bisphosphate","C00354",0]
["fgam","N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide","C04376",0]
["ficytC","Ferricytochrome c",null,1]
["focytC","Ferrocytochrome C",null,1]
["for","Formate","C00058",0]
["fpram","2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine","C04640",0]
["fprica","5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide","C04734",0]
["fum","Fumarate","C00122",0]
["g1p","D-Glucose 1-phosphate","C00103",0]
["g3p","Glyceraldehyde 3-phosphate","C00118",0]
["g6p","D-Glucose 6-phosphate","C00668",0]
["gar","N1-(5-Phospho-D-ribosyl)glycinamide","C03838",0]
["gdp","GDP","C00035",0]
["glc-D","D-Glucose","C00031",0]
["gln-L","L-Glutamine","C00064",0]
["glu-L","L-Glutamate","C00025",0]
["glu5p","L-Glutamate 5-phosphate","C03287",0]
["glu5sa","L-Glutamate 5-semialdehyde","C01165",0]
["glucys","gamma-L-Glutamyl-L-cysteine","C00669",0]
["gly","Glycine","C00037",0]
["glycogen","One glucose equivalent of glycogen (artificial)",null,0]
["gmp","GMP","C00144",0]
["gthrd","Reduced glutathione","C00051",0]
["gtp","GTP","C00044",0]
["h","H+","C00080",0]
["h2o","H2O","C00001",0]
["hco3","Bicarbonate","C00288",0]
["his-L","L-Histidine","C00135",0]
["hxan","Hypoxanthine","C00262",0]
["h_ims","H+ intermembrane space",null,1]
["icit","Isocitrate","C00311",0]
["ile-L","L-Isoleucine","C00407",0]
["imp","Inosine 5'-monophophate","C00130",0]
["lac-L","L-Lactate","C00186",0]
["leu-L","L-Leucine","C00123",0]
["lys-L","L-Lysine","C00047",0]
["mal-L","L-Malate","C00149",0]
["met-L","L-Methionine","C00073",0]
["nad","Nicotinamide adenine dinucleotide","C00003",0]
["nadh","Nicotinamide adenine dinucleotide - reduced","C00004",0]
["nadp","Nicotinamide adenine dinucleotide phosphate","C00006",0]
["nadph","Nicotinamide adenine dinucleotide phosphate - reduced","C00005",0]
["nh4","Ammonium","C01342",0]
["o2","O2","C00007",0]
["oaa","Oxaloacetate","C00036",0]
["orn","Ornithine","C00077",0]
["orot","Orotate","C00295",0]
["orot5p","Orotidine 5'-phosphate","C01103",0]
["pep","Phosphoenolpyruvate","C00074",0]
["phe-L","L-Phenylalanine","C00079",0]
["pi","Phosphate","C00009",0]
["ppi","Diphosphate","C00013",0]
["pram","5-Phospho-beta-D-ribosylamine","C03090",0]
["pro-L","L-Proline","C00148",0]
["protein","Generic protein molecule, represents 1aa",null,1]
["prpp","5-Phospho-alpha-D-ribose 1-diphosphate","C00119",0]
["pser-L","O-Phospho-L-serine","C01005",0]
["pyr","Pyruvate","C00022",0]
["q10","Ubiquinone-10","C11378",0]
["q10h2","Ubiquinol-10",null,0]
["r5p","alpha-D-Ribose 5-phosphate","C00117",0]
["rna","Generic RNA molecule, represents 1 base",null,1]
["ru5p-D","D-Ribulose 5-phosphate","C00199",0]
["s7p","Sedoheptulose 7-phosphate","C05382",0]
["ser-L","L-Serine","C00065",0]
["succ","Succinate","C00042",0]
["succoa","Succinyl-CoA","C00091",0]
["thbpt","Tetrahydrobiopterin","C00272",0]
["thbpt4acam","Tetrahydrobiopterin-4a-carbinolamine",null,0]
["thf","5,6,7,8-Tetrahydrofolate","C00101",0]
["thr-L","L-Threonine","C00188",0]
["trp-L","L-Tryptophan","C00078",0]
["tyr-L","L-Tyrosine","C00082",0]
["udp","UDP","C00015",0]
["udpg","UDPglucose","C00029",0]
["ump","UMP","C00105",0]
["ura","Uracil","C00106",0]
["urea","Urea","C00086",0]
["utp","UTP","C00075",0]
["val-L","L-Valine","C00183",0]
["xmp","Xanthosine 5'-phosphate","C00655",0]
["xu5p-D","D-Xylulose 5-phosphate","C00231",0]

{"sheet":"Stoichiometry","index":3,"n_rows":126,"n_cols":3,"rows_kept":126,"cut":false,"hidden":false,"merged":[],"flags":["formulas_cached_only"]}
["Reaction ID","Stoichiometry","Atom map"]
["ACITL","atp_c + cit_c + coa_c ==> accoa_c + adp_c + oaa_c + pi_c",1]
["ACOAHi","accoa_c + h2o_c ==> ac_c + coa_c + h_c",1]
["ACONTm","cit_m <=> icit_m",1]
["ACSm","ac_m + atp_m + coa_m ==> accoa_m + amp_m + ppi_m",1]
["ADK1","amp_c + atp_c <=> 2 adp_c",1]
["ADK1m","amp_m + atp_m <=> 2 adp_m",1]
["ADSL1","dcamp_c ==> amp_c + fum_c",1]
["ADSL2","25aics_c ==> aicar_c + fum_c",1]
["ADSS","asp-L_c + gtp_c + imp_c ==> dcamp_c + gdp_c + 2 h_c + pi_c",1]
["AICART","10fthf_c + aicar_c ==> fprica_c + thf_c",1]
["AIRCr","air_c + co2_c ==> 5aizc_c + h_c",1]
["AKGDm","akg_m + coa_m + nad_m ==> co2_m + nadh_m + succoa_m",1]
["AKGtm","akg_m <=> akg_c",1]
["AKG_OX","akg_e ==> co2_c + h_c + succ_e",1]
["ALATA_L","glu-L_c + pyr_c <=> akg_c + ala-L_c",1]
["ARGN","arg-L_c + h2o_c ==> orn_c + urea_c",1]
["ARGSL","argsuc_c ==> arg-L_c + fum_c",1]
["ARGSS","asp-L_c + atp_c + citr-L_c ==> amp_c + argsuc_c + h_c + ppi_c",1]
["ASNS1","asp-L_c + atp_c + gln-L_c + h2o_c ==> amp_c + asn-L_c + glu-L_c + h_c + ppi_c",1]
["ASPCTr","asp-L_c + cbp_c ==> cbasp_c + h_c + pi_c",1]
["ASPTA","akg_c + asp-L_c <=> glu-L_c + oaa_c",1]
["ASPTAm","akg_m + asp-L_m <=> glu-L_m + oaa_m",1]
["ASPtm","asp-L_c <=> asp-L_m",1]
["ATPS4m","adp_m + 4 h_ims_m + pi_m ==> atp_m + h2o_m + 3 h_m",1]
["ATPtm","adp_c + atp_m ==> adp_m + atp_c",1]
["CBPS","2 atp_c + gln-L_c + h2o_c + hco3_c ==> 2 adp_c + cbp_c + glu-L_c + 2 h_c + pi_c",1]
["CBPSam","2 atp_m + hco3_m + nh4_m ==> 2 adp_m + cbp_m + 2 h_m + pi_m",1]
["CELLWORK","atp_c + h2o_c ==> adp_c + energy_c + h_c + pi_c",1]
["CITtm","cit_m <=> cit_c",1]
["CO2tm","co2_c <=> co2_m",1]
["CSm","accoa_m + h2o_m + oaa_m ==> cit_m + coa_m + h_m",1]
["CTPS2","atp_c + gln-L_c + h2o_c + utp_c ==> adp_c + ctp_c + glu-L_c + 2 h_c + pi_c",1]
["CYOOm","4 focytC_m + 8 h_m + o2_m ==> 4 ficytC_m + 2 h2o_m + 4 h_ims_m",0]
["CYOR-u10m","2 ficytC_m + 2 h_m + q10h2_m ==> 2 focytC_m + 4 h_ims_m + q10_m",0]
["DHORD9","dhor-S_c + q10_m ==> orot_c + q10h2_m",1]
["DHORTS","cbasp_c + h_c ==> dhor-S_c + h2o_c",1]
["DHPR","dhbpt_c + h_c + nadh_c ==> nad_c + thbpt_c",0]
["ENO","2pg_c <=> h2o_c + pep_c",1]
["FBA","fdp_c <=> dhap_c + g3p_c",1]
["FTHFL","atp_c + for_c + thf_c ==> 10fthf_c + adp_c + pi_c",1]
["FUMm","fum_m + h2o_m <=> mal-L_m",1]
["FUMtm","fum_c <=> fum_m",1]
["G5SADs","glu5sa_c ==> 1pyr5c_c + h2o_c + h_c",1]
["G5SD","glu5p_c + h_c + nadph_c ==> glu5sa_c + nadp_c + pi_c",1]
["G6PDH2r","g6p_c + nadp_c ==> 6pgl_c + h_c + nadph_c",1]
["GALU","g1p_c + h_c + utp_c ==> ppi_c + udpg_c",1]
["GAPD","g3p_c + nad_c + pi_c ==> 13dpg_c + h_c + nadh_c",1]
["GARFT","10fthf_c + gar_c ==> fgam_c + h_c + thf_c",1]
["GK1","atp_c + gmp_c ==> adp_c + gdp_c",1]
["GLNtm","gln-L_c <=> gln-L_m",1]
["GLU5K","atp_c + glu-L_c ==> adp_c + glu5p_c",1]
["GLUCYS","atp_c + cys-L_c + glu-L_c ==> adp_c + glucys_c + h_c + pi_c",1]
["GLUDxm","glu-L_m + h2o_m + nad_m <=> akg_m + h_m + nadh_m + nh4_m",1]
["GLUNm","gln-L_m + h2o_m <=> glu-L_m + nh4_m",1]
["GLUPRT","gln-L_c + h2o_c + prpp_c ==> glu-L_c + ppi_c + pram_c",1]
["GLUt2m","glu-L_c <=> glu-L_m",1]
["GLU_AKG_AT","glu-L_c <=> akg_c + amine_nh4_c",1]
["GLYCOGEN_SYNTH","udpg_c ==> glycogen_c + h_c + udp_c",1]
["GMPS2","atp_c + gln-L_c + h2o_c + xmp_c ==> amp_c + glu-L_c + gmp_c + 2 h_c + ppi_c",1]
["GND","6pgc_c + nadp_c ==> co2_c + nadph_c + ru5p-D_c",1]
["GTHS","atp_c + glucys_c + gly_c ==> adp_c + gthrd_c + h_c + pi_c",1]
["H2Otm","h2o_c <=> h2o_m",0]
["HCO3E","co2_c + h2o_c <=> h_c + hco3_c",1]
["HCO3Em","co2_m + h2o_m <=> hco3_m + h_m",1]
["HEX1","atp_c + glc-D_c ==> adp_c + g6p_c + h_c",1]
["Htm2","h_m <=> h_c",0]
["HXPRT","hxan_c + prpp_c ==> imp_c + ppi_c",1]
["ICDHxm","icit_m + nad_m <=> akg_m + co2_m + nadh_m",1]
["IMPC","fprica_c ==> h2o_c + imp_c",1]
["IMPD","h2o_c + imp_c + nad_c ==> h_c + nadh_c + xmp_c",1]
["LDH_L","lac-L_c + nad_c <=> h_c + nadh_c + pyr_c",1]
["MALtm","mal-L_c <=> mal-L_m",1]
["MDH","mal-L_c + nad_c <=> h_c + nadh_c + oaa_c",1]
["MDHm","mal-L_m + nad_m <=> h_m + nadh_m + oaa_m",1]
["ME1m","mal-L_m + nad_m ==> co2_m + nadh_m + pyr_m",1]
["NADH2-u10m","5 h_m + nadh_m + q10_m ==> 4 h_ims_m + nad_m + q10h2_m",0]
["NADH_REDOX","nadh_c ==> h_c + nad_c",0]
["NADPH_REDOX","nadph_c ==> h_c + nadp_c",0]
["NDPK1","atp_c + gdp_c ==> adp_c + gtp_c",1]
["NDPK2","atp_c + udp_c ==> adp_c + utp_c",1]
["NH4tm","nh4_m <=> nh4_c",1]
["O2tm","o2_c <=> o2_m",0]
["OAAtm","oaa_c ==> oaa_m",1]
["OAT","glu5sa_c + glu-L_c <=> akg_c + orn_c",1]
["OCBTm","cbp_m + orn_m ==> citr-L_m + h_m + pi_m",1]
["OMPDC","h_c + orot5p_c ==> co2_c + ump_c",1]
["ORNt4m","citr-L_m + orn_c ==> citr-L_c + orn_m",1]
["ORPT","orot_c + prpp_c ==> orot5p_c + ppi_c",1]
["P5CR","1pyr5c_c + 2 h_c + nadph_c ==> nadp_c + pro-L_c",1]
["PCm","atp_m + hco3_m + pyr_m ==> adp_m + h_m + oaa_m + pi_m",1]
["PDHm","coa_m + nad_m + pyr_m ==> accoa_m + co2_m + nadh_m",1]
["PFK","atp_c + f6p_c ==> adp_c + fdp_c + h_c",1]
["PGCD","3pg_c + nad_c ==> 3php_c + h_c + nadh_c",1]
["PGI","g6p_c <=> f6p_c",1]
["PGK","13dpg_c + adp_c ==> 3pg_c + atp_c",1]
["PGL","6pgl_c + h2o_c ==> 6pgc_c + h_c",1]
["PGM","3pg_c ==> 2pg_c",1]
["PGMT","g1p_c <=> g6p_c",1]
["PHETHPTOX2","o2_c + phe-L_c + thbpt_c ==> thbpt4acam_c + tyr-L_c",1]
["PIt2m","pi_c ==> pi_m",0]
["PPA","h2o_c + ppi_c ==> h_c + 2 pi_c",0]
["PPAm","h2o_m + ppi_m ==> h_m + 2 pi_m",0]
["PRAGSr","atp_c + gly_c + pram_c ==> adp_c + gar_c + h_c + pi_c",1]
["PRAIS","atp_c + fpram_c ==> adp_c + air_c + 2 h_c + pi_c",1]
["PRASCS","5aizc_c + asp-L_c + atp_c ==> 25aics_c + adp_c + h_c + pi_c",1]
["PRFGS","atp_c + fgam_c + gln-L_c + h2o_c ==> adp_c + fpram_c + glu-L_c + h_c + pi_c",1]
["PROT_SYNTH_INT","124 ala-L_c + 44 arg-L_c + 28 asn-L_c + 80 asp-L_c + 1000 atp_c + 2 cys-L_c + 28 gln-L_c + 82 glu-L_c + 79 gly_c + 2000 gtp_c + 3000 h2o_c + 18 his-L_c + 52 ile-L_c + 80 leu-L_c + 78 lys-L_c + 14 met-L_c + 36 phe-L_c + 45 pro-L_c + 50 ser-L_c + 52 thr-L_c + 8 trp-L_c + 28 tyr-L_c + 72 val-L_c ==> 1000 adp_c + 2000 gdp_c + 3000 h_c + 3000 pi_c + 1000 protein_c",0]
["PRPPS","atp_c + r5p_c ==> amp_c + h_c + prpp_c",1]
["PSERT","3php_c + glu-L_c <=> akg_c + pser-L_c",1]
["PSP_L","h2o_c + pser-L_c ==> pi_c + ser-L_c",1]
["PYK","adp_c + h_c + pep_c ==> atp_c + pyr_c",1]
["PYRt2m","pyr_c <=> pyr_m",1]
["RNA_SYNTH_INT","3 atp_c + 2 ctp_c + 2 gtp_c + 3 utp_c ==> 10 ppi_c + 10 rna_c",0]
["RPE","ru5p-D_c <=> xu5p-D_c",1]
["RPI","ru5p-D_c <=> r5p_c",1]
["SUCC_OX","3 o2_c + succ_e ==> 4 co2_c + 2 h2o_c",1]
["SUCD1m","q10_m + succ_m ==> fum_m + q10h2_m",1]
["SUCOASm","adp_m + pi_m + succoa_m ==> atp_m + coa_m + succ_m",1]
["TALA","g3p_c + s7p_c <=> e4p_c + f6p_c",1]
["THBPT4ACAMDASE","thbpt4acam_c ==> dhbpt_c + h2o_c",0]
["TKT1","r5p_c + xu5p-D_c <=> g3p_c + s7p_c",1]
["TKT2","e4p_c + xu5p-D_c <=> f6p_c + g3p_c",1]
["TPI","dhap_c <=> g3p_c",1]
["UMPK","atp_c + ump_c ==> adp_c + udp_c",1]
["UPRT","prpp_c + ura_c ==> ppi_c + ump_c",1]

{"sheet":"Atom map","index":4,"n_rows":1405,"n_cols":9,"rows_kept":1405,"cut":false,"hidden":false,"merged":[[0,1,0,4],[0,5,0,8]],"flags":["formulas_cached_only"]}
[null,"Substrate",null,null,null,"Product"]
["Reaction ID","Index","Metabolite","Element","Atom number","Index","Metabolite","Element","Atom number"]
["ACITL",1,"atp_c","C",1,1,"adp_c","C",1]
["ACITL",1,"atp_c","C",2,1,"adp_c","C",2]
["ACITL",1,"atp_c","C",3,1,"adp_c","C",3]
["ACITL",1,"atp_c","C",4,1,"adp_c","C",4]
["ACITL",1,"atp_c","C",5,1,"adp_c","C",5]
["ACITL",1,"atp_c","C",6,1,"adp_c","C",6]
["ACITL",1,"atp_c","C",7,1,"adp_c","C",7]
["ACITL",1,"atp_c","C",8,1,"adp_c","C",8]
["ACITL",1,"atp_c","C",9,1,"adp_c","C",9]
["ACITL",1,"atp_c","C",10,1,"adp_c","C",10]
["ACITL",1,"atp_c","N",11,1,"adp_c","N",11]
["ACITL",1,"atp_c","N",12,1,"adp_c","N",12]
["ACITL",1,"atp_c","N",13,1,"adp_c","N",13]
["ACITL",1,"atp_c","N",14,1,"adp_c","N",14]
["ACITL",1,"atp_c","N",15,1,"adp_c","N",15]
["ACITL",1,"cit_c","C",1,1,"accoa_c","C",1]
["ACITL",1,"cit_c","C",2,1,"accoa_c","C",2]
["ACITL",1,"cit_c","C",3,1,"oaa_c","C",2]
["ACITL",1,"cit_c","C",4,1,"oaa_c","C",3]
["ACITL",1,"cit_c","C",5,1,"oaa_c","C",4]
["ACITL",1,"cit_c","C",6,1,"oaa_c","C",1]
["ACOAHi",1,"accoa_c","C",1,1,"ac_c","C",1]
["ACOAHi",1,"accoa_c","C",2,1,"ac_c","C",2]
["ACONTm",1,"cit_m","C",1,1,"icit_m","C",1]
["ACONTm",1,"cit_m","C",2,1,"icit_m","C",2]
["ACONTm",1,"cit_m","C",3,1,"icit_m","C",3]
["ACONTm",1,"cit_m","C",4,1,"icit_m","C",4]
["ACONTm",1,"cit_m","C",5,1,"icit_m","C",5]
["ACONTm",1,"cit_m","C",6,1,"icit_m","C",6]
["ACSm",1,"ac_m","C",1,1,"accoa_m","C",1]
["ACSm",1,"ac_m","C",2,1,"accoa_m","C",2]
["ACSm",1,"atp_m","C",1,1,"amp_m","C",1]
["ACSm",1,"atp_m","C",2,1,"amp_m","C",2]
["ACSm",1,"atp_m","C",3,1,"amp_m","C",3]
["ACSm",1,"atp_m","C",4,1,"amp_m","C",4]
["ACSm",1,"atp_m","C",5,1,"amp_m","C",5]
["ACSm",1,"atp_m","C",6,1,"amp_m","C",6]
["ACSm",1,"atp_m","C",7,1,"amp_m","C",7]
["ACSm",1,"atp_m","C",8,1,"amp_m","C",8]
["ACSm",1,"atp_m","C",9,1,"amp_m","C",9]
["ACSm",1,"atp_m","C",10,1,"amp_m","C",10]
["ACSm",1,"atp_m","N",11,1,"amp_m","N",11]
["ACSm",1,"atp_m","N",12,1,"amp_m","N",12]
["ACSm",1,"atp_m","N",13,1,"amp_m","N",13]
["ACSm",1,"atp_m","N",14,1,"amp_m","N",14]
["ACSm",1,"atp_m","N",15,1,"amp_m","N",15]
["ADK1",1,"amp_c","C",1,1,"adp_c","C",1]
["ADK1",1,"amp_c","C",2,1,"adp_c","C",2]
["ADK1",1,"amp_c","C",3,1,"adp_c","C",3]
["ADK1",1,"amp_c","C",4,1,"adp_c","C",4]
["ADK1",1,"amp_c","C",5,1,"adp_c","C",5]
["ADK1",1,"amp_c","C",6,1,"adp_c","C",6]
["ADK1",1,"amp_c","C",7,1,"adp_c","C",7]
["ADK1",1,"amp_c","C",8,1,"adp_c","C",8]
["ADK1",1,"amp_c","C",9,1,"adp_c","C",9]
["ADK1",1,"amp_c","C",10,1,"adp_c","C",10]
["ADK1",1,"amp_c","N",11,1,"adp_c","N",11]
["ADK1",1,"amp_c","N",12,1,"adp_c","N",12]
["ADK1",1,"amp_c","N",13,1,"adp_c","N",13]
["ADK1",1,"amp_c","N",14,1,"adp_c","N",14]
["ADK1",1,"amp_c","N",15,1,"adp_c","N",15]
["ADK1",1,"atp_c","C",1,2,"adp_c","C",1]
["ADK1",1,"atp_c","C",2,2,"adp_c","C",2]
["ADK1",1,"atp_c","C",3,2,"adp_c","C",3]
["ADK1",1,"atp_c","C",4,2,"adp_c","C",4]
["ADK1",1,"atp_c","C",5,2,"adp_c","C",5]
["ADK1",1,"atp_c","C",6,2,"adp_c","C",6]
["ADK1",1,"atp_c","C",7,2,"adp_c","C",7]
["ADK1",1,"atp_c","C",8,2,"adp_c","C",8]
["ADK1",1,"atp_c","C",9,2,"adp_c","C",9]
["ADK1",1,"atp_c","C",10,2,"adp_c","C",10]
["ADK1",1,"atp_c","N",11,2,"adp_c","N",11]
["ADK1",1,"atp_c","N",12,2,"adp_c","N",12]
["ADK1",1,"atp_c","N",13,2,"adp_c","N",13]
["ADK1",1,"atp_c","N",14,2,"adp_c","N",14]
["ADK1",1,"atp_c","N",15,2,"adp_c","N",15]
["ADK1m",1,"amp_m","C",1,1,"adp_m","C",1]
["ADK1m",1,"amp_m","C",2,1,"adp_m","C",2]
["ADK1m",1,"amp_m","C",3,1,"adp_m","C",3]
["ADK1m",1,"amp_m","C",4,1,"adp_m","C",4]
["ADK1m",1,"amp_m","C",5,1,"adp_m","C",5]
["ADK1m",1,"amp_m","C",6,1,"adp_m","C",6]
["ADK1m",1,"amp_m","C",7,1,"adp_m","C",7]
["ADK1m",1,"amp_m","C",8,1,"adp_m","C",8]
["ADK1m",1,"amp_m","C",9,1,"adp_m","C",9]
["ADK1m",1,"amp_m","C",10,1,"adp_m","C",10]
["ADK1m",1,"amp_m","N",11,1,"adp_m","N",11]
["ADK1m",1,"amp_m","N",12,1,"adp_m","N",12]
["ADK1m",1,"amp_m","N",13,1,"adp_m","N",13]
["ADK1m",1,"amp_m","N",14,1,"adp_m","N",14]
["ADK1m",1,"amp_m","N",15,1,"adp_m","N",15]
["ADK1m",1,"atp_m","C",1,2,"adp_m","C",1]
["ADK1m",1,"atp_m","C",2,2,"adp_m","C",2]
["ADK1m",1,"atp_m","C",3,2,"adp_m","C",3]
["ADK1m",1,"atp_m","C",4,2,"adp_m","C",4]
["ADK1m",1,"atp_m","C",5,2,"adp_m","C",5]
["ADK1m",1,"atp_m","C",6,2,"adp_m","C",6]
["ADK1m",1,"atp_m","C",7,2,"adp_m","C",7]
["ADK1m",1,"atp_m","C",8,2,"adp_m","C",8]
["ADK1m",1,"atp_m","C",9,2,"adp_m","C",9]
["ADK1m",1,"atp_m","C",10,2,"adp_m","C",10]
["ADK1m",1,"atp_m","N",11,2,"adp_m","N",11]
["ADK1m",1,"atp_m","N",12,2,"adp_m","N",12]
["ADK1m",1,"atp_m","N",13,2,"adp_m","N",13]
["ADK1m",1,"atp_m","N",14,2,"adp_m","N",14]
["ADK1m",1,"atp_m","N",15,2,"adp_m","N",15]
["ADSL1",1,"dcamp_c","C",1,1,"fum_c","C",4]
["ADSL1",1,"dcamp_c","C",2,1,"fum_c","C",3]
["ADSL1",1,"dcamp_c","C",3,1,"fum_c","C",2]
["ADSL1",1,"dcamp_c","C",4,1,"fum_c","C",1]
["ADSL1",1,"dcamp_c","C",5,1,"amp_c","C",1]
["ADSL1",1,"dcamp_c","C",6,1,"amp_c","C",2]
["ADSL1",1,"dcamp_c","C",7,1,"amp_c","C",3]
["ADSL1",1,"dcamp_c","C",8,1,"amp_c","C",4]
["ADSL1",1,"dcamp_c","C",9,1,"amp_c","C",5]
["ADSL1",1,"dcamp_c","C",10,1,"amp_c","C",6]
["ADSL1",1,"dcamp_c","C",11,1,"amp_c","C",7]
["ADSL1",1,"dcamp_c","C",12,1,"amp_c","C",8]
["ADSL1",1,"dcamp_c","C",13,1,"amp_c","C",9]
["ADSL1",1,"dcamp_c","C",14,1,"amp_c","C",10]
["ADSL1",1,"dcamp_c","N",15,1,"amp_c","N",11]
["ADSL1",1,"dcamp_c","N",16,1,"amp_c","N",12]
["ADSL1",1,"dcamp_c","N",17,1,"amp_c","N",14]
["ADSL1",1,"dcamp_c","N",18,1,"amp_c","N",13]
["ADSL1",1,"dcamp_c","N",19,1,"amp_c","N",15]
["ADSL2",1,"25aics_c","C",1,1,"aicar_c","C",1]
["ADSL2",1,"25aics_c","C",2,1,"aicar_c","C",2]
["ADSL2",1,"25aics_c","C",3,1,"aicar_c","C",3]
["ADSL2",1,"25aics_c","C",4,1,"aicar_c","C",4]
["ADSL2",1,"25aics_c","C",5,1,"fum_c","C",4]
["ADSL2",1,"25aics_c","C",6,1,"fum_c","C",3]
["ADSL2",1,"25aics_c","C",7,1,"fum_c","C",2]
["ADSL2",1,"25aics_c","C",8,1,"fum_c","C",1]
["ADSL2",1,"25aics_c","C",9,1,"aicar_c","C",5]
["ADSL2",1,"25aics_c","C",10,1,"aicar_c","C",6]
["ADSL2",1,"25aics_c","C",11,1,"aicar_c","C",7]
["ADSL2",1,"25aics_c","C",12,1,"aicar_c","C",8]
["ADSL2",1,"25aics_c","C",13,1,"aicar_c","C",9]
["ADSL2",1,"25aics_c","N",14,1,"aicar_c","N",10]
["ADSL2",1,"25aics_c","N",15,1,"aicar_c","N",11]
["ADSL2",1,"25aics_c","N",16,1,"aicar_c","N",12]
["ADSL2",1,"25aics_c","N",17,1,"aicar_c","N",13]
["ADSS",1,"asp-L_c","C",1,1,"dcamp_c","C",1]
["ADSS",1,"asp-L_c","C",2,1,"dcamp_c","C",2]
["ADSS",1,"asp-L_c","C",3,1,"dcamp_c","C",3]
["ADSS",1,"asp-L_c","C",4,1,"dcamp_c","C",4]
["ADSS",1,"asp-L_c","N",5,1,"dcamp_c","N",19]
["ADSS",1,"gtp_c","C",1,1,"gdp_c","C",1]
["ADSS",1,"gtp_c","C",2,1,"gdp_c","C",2]
["ADSS",1,"gtp_c","C",3,1,"gdp_c","C",3]
["ADSS",1,"gtp_c","C",4,1,"gdp_c","C",4]
["ADSS",1,"gtp_c","C",5,1,"gdp_c","C",5]
["ADSS",1,"gtp_c","C",6,1,"gdp_c","C",6]
["ADSS",1,"gtp_c","C",7,1,"gdp_c","C",7]
["ADSS",1,"gtp_c","C",8,1,"gdp_c","C",8]
["ADSS",1,"gtp_c","C",9,1,"gdp_c","C",9]
["ADSS",1,"gtp_c","C",10,1,"gdp_c","C",10]
["ADSS",1,"gtp_c","N",11,1,"gdp_c","N",11]
["ADSS",1,"gtp_c","N",12,1,"gdp_c","N",12]
["ADSS",1,"gtp_c","N",13,1,"gdp_c","N",13]
["ADSS",1,"gtp_c","N",14,1,"gdp_c","N",14]
["ADSS",1,"gtp_c","N",15,1,"gdp_c","N",15]
["ADSS",1,"imp_c","C",1,1,"dcamp_c","C",5]
["ADSS",1,"imp_c","C",2,1,"dcamp_c","C",6]
["ADSS",1,"imp_c","C",3,1,"dcamp_c","C",7]
["ADSS",1,"imp_c","C",4,1,"dcamp_c","C",8]
["ADSS",1,"imp_c","C",5,1,"dcamp_c","C",9]
["ADSS",1,"imp_c","C",6,1,"dcamp_c","C",10]
["ADSS",1,"imp_c","C",7,1,"dcamp_c","C",11]
["ADSS",1,"imp_c","C",8,1,"dcamp_c","C",12]
["ADSS",1,"imp_c","C",9,1,"dcamp_c","C",13]
["ADSS",1,"imp_c","C",10,1,"dcamp_c","C",14]
["ADSS",1,"imp_c","N",11,1,"dcamp_c","N",15]
["ADSS",1,"imp_c","N",12,1,"dcamp_c","N",16]
["ADSS",1,"imp_c","N",13,1,"dcamp_c","N",18]
["ADSS",1,"imp_c","N",14,1,"dcamp_c","N",17]
["AICART",1,"10fthf_c","C",1,1,"fprica_c","C",5]
["AICART",1,"aicar_c","C",1,1,"fprica_c","C",1]
["AICART",1,"aicar_c","C",2,1,"fprica_c","C",2]
["AICART",1,"aicar_c","C",3,1,"fprica_c","C",3]
["AICART",1,"aicar_c","C",4,1,"fprica_c","C",4]
["AICART",1,"aicar_c","C",5,1,"fprica_c","C",6]
["AICART",1,"aicar_c","C",6,1,"fprica_c","C",7]
["AICART",1,"aicar_c","C",7,1,"fprica_c","C",8]
["AICART",1,"aicar_c","C",8,1,"fprica_c","C",9]
["AICART",1,"aicar_c","C",9,1,"fprica_c","C",10]
["AICART",1,"aicar_c","N",10,1,"fprica_c","N",11]
["AICART",1,"aicar_c","N",11,1,"fprica_c","N",12]
["AICART",1,"aicar_c","N",12,1,"fprica_c","N",13]
["AICART",1,"aicar_c","N",13,1,"fprica_c","N",14]
["AIRCr",1,"air_c","C",1,1,"5aizc_c","C",1]
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