Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Identification type 10ug_R1 Identification type 10ug_R2 Experiment 10ug_R1 Experiment 10ug_R2 Intensity Intensity 10ug_R1 Intensity 10ug_R2 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Deamidation (NQ) site IDs Oxidation (M) site IDs Phospho (STY) site IDs MS/MS Count AAAAAATAPPSPGPAQPGPR AAPARAPRAAAAAATA GPAQPGPRAQRAAPLA R A A P R A 8 1 0 0 0 1 0 2 0 0 0 0 0 0 6 1 1 0 0 0 0 0 20 0 1754.9064 Q6SPF0 Q6SPF0 151 170 SAMD1 Atherin yes yes 2;3 0.0012128 72.927 By MS/MS By MS/MS 2 2 31752000 13513000 18239000 0 1688 0 0;1;2;3 0;1;2 2 2359 3 AAATPESQEPQAK EGTAQEGKAAATPESQ ESQEPQAKGAEASAAS K A A A K G 4 0 0 0 0 2 2 0 0 0 0 1 0 0 2 1 1 0 0 0 0 0 13 0 1326.6416 P49006 P49006 145 157 MARCKSL1 MARCKS-related protein yes yes 2 6.6173E-16 139.19 By MS/MS By MS/MS 2 2 17980000 8643800 9336400 1 1377 1 4;5;6;7 3;4;5;6;7 5 3701 5 AAAYDISEDEED PANLSRHKAAAYDISE DISEDEED________ K A A E D - 3 0 0 3 0 0 3 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 12 0 1326.5099 P49585 P49585 356 367 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 1;2 0.0012487 94.616 By MS/MS By MS/MS 2 2 13924000 6312900 7610900 2 1380 2 8;9;10;11 8;9;10 8 1842 3 AADSDDGAVSAPAASDGGVSK ________________ ASDGGVSKSTTSGEEL M A A S K S 6 0 0 4 0 0 0 3 0 0 0 1 0 0 1 4 0 0 0 2 0 0 21 0 1846.8181 Q96GM8 Q96GM8 2 22 TOE1 Target of EGR1 protein 1 yes yes 2 5.4206E-36 122.1 By MS/MS By matching 1 1 24604000 12052000 12552000 3 1893 3 12;13 11 11 2672 1 AAEAGGAEEQYGFLTTPTK YVMAVVDKAAEAGGAE GFLTTPTKQLGAQSPG K A A T K Q 4 0 0 0 0 1 3 3 0 0 1 1 0 1 1 0 3 0 1 0 0 0 19 0 1939.9163 P46821 P46821 1052 1070 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 0.0011471 85.271 By MS/MS By MS/MS 1 2 18310000 8640600 9669400 4 1367 4 14;15;16 12;13;14 13 4296 3 AAEDDEDDDVDTKK AESATGKRAAEDDEDD DDDVDTKKQKTDEDD_ R A A K K Q 2 0 0 6 0 0 2 0 0 0 0 2 0 0 0 0 1 0 0 1 0 0 14 1 1564.6377 B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1;P06454 B8ZZQ6 87 100 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 2 0.0087192 61.958 By MS/MS 1 0 0 0 5 417 5 17 15 15 1 AAGGAPSPPPPVR GLKSRGSRAAGGAPSP PSPPPPVRRASAGPAP R A A V R R 3 1 0 0 0 0 0 2 0 0 0 0 0 0 5 1 0 0 0 1 0 0 13 0 1172.6302 Q4KMP7 Q4KMP7 672 684 TBC1D10B TBC1 domain family member 10B yes yes 2 0.0054641 67.115 By MS/MS By MS/MS 1 1 5753300 3211700 2541600 6 1589 6 18;19 16;17;18 18 2196 3 AAGMSSPGAQSHPEELPR LRAERAEKAAGMSSPG SHPEELPRGASTPSEK K A A P R G 3 1 0 0 0 1 2 2 1 0 1 0 1 0 3 3 0 0 0 0 0 0 18 0 1820.8475 M0R300;M0R0P8;Q13459;M0QZY4;M0R2J3 M0R300 712 729 MYO9B Unconventional myosin-IXb yes no 3 0.0042623 54.281 By matching By MS/MS 1 1 1275000 697740 577260 7 1072 7 20;21 19;20 20 1410;1411 2 AAHTEDINACTLTTSPR ASEPSLHRAAHTEDIN CTLTTSPRLPVF____ R A A P R L 3 1 1 1 1 0 1 0 1 1 1 0 0 0 1 1 4 0 0 0 0 0 17 0 1856.8687 H7C155;P04049 H7C155 507 523 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 2;3 0.00021673 93.495 By MS/MS By MS/MS 2 2 18681000 8930200 9751100 8 952 8 22;23;24;25 21;22;23 23 1277;3538;3539 3 AAKLSEGSQPAEEEEDQETPSR SSRVRQARAAKLSEGS EDQETPSRNLRVRADR R A A S R N 3 1 0 1 0 2 6 1 0 0 1 1 0 0 2 3 1 0 0 0 0 0 22 1 2387.0725 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 178 199 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.0020274 65.416 By MS/MS By MS/MS 2 2 28797000 13802000 14995000 9 576 9;10 26;27;28;29 24;25;26 26 764;765 3 AAKPGPAEAPSPTASPSGDASPPATAPYDPR TDSTASSRAAKPGPAE ATAPYDPRVLAAGGLG R A A P R V 8 1 0 2 0 0 1 2 0 0 0 1 0 0 9 4 2 0 1 0 0 0 31 1 2930.4046 Q9UPT8;M0QY97 Q9UPT8 1094 1124 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 3 0.0011 48.865 By MS/MS By matching 1 1 14260000 7410000 6849500 10 2131 11 30;31 27 27 3059 1 AALAPAKESPR SGKTHQIRAALAPAKE APAKESPRKGAAPTPP R A A P R K 4 1 0 0 0 0 1 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 11 1 1109.6193 J3KQ96;E7ETY2;Q13428;H0YAB7 J3KQ96 898 908 TCOF1 Treacle protein yes no 2;3 0.0010191 94.717 By MS/MS By MS/MS 2 4 140640000 52836000 87809000 11 591 12 32;33;34;35;36;37 28;29;30;31;32;33;34 34 791 7 AALEYLGSFDHYAT DQYQLCYRAALEYLGS GSFDHYAT________ R A A A T - 3 0 0 1 0 0 1 1 1 0 2 0 0 1 0 1 1 0 2 0 0 0 14 0 1556.7147 H0Y380;H0Y4H1;H0Y7Z9;H0Y6Z7;P10586;Q3KPI9;F5GWR7;P23468 H0Y380 966 979 PTPRF;PTPRD Receptor-type tyrosine-protein phosphatase F;Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta yes no 2 0.0051769 63.816 By MS/MS By matching 1 1 19854000 8475400 11378000 12 817 13 38;39 35 35 1097 1 AALLKASPK NEVKKLQKAALLKASP ALLKASPKKAPGTKGT K A A P K K 3 0 0 0 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 9 1 897.56475 P50914 P50914 133 141 RPL14 60S ribosomal protein L14 yes yes 2 0.0026765 95.618 By MS/MS By MS/MS 1 1 60106000 31321000 28784000 13 1391 14 40;41 36;37 36 1873 2 AAMYDIISSPSKDSTK DEKEQSEKAAMYDIIS SPSKDSTKLTLRLSRV K A A T K L 2 0 0 2 0 0 0 0 0 2 0 2 1 0 1 4 1 0 1 0 0 0 16 1 1712.8291 Q6KC79 Q6KC79 342 357 NIPBL Nipped-B-like protein yes yes 2 0.00091372 75.479 By MS/MS By MS/MS 1 2 3448200 1577100 1871100 14 1670 15 42;43;44 38;39 38 245 2332;2333 2 AAPEASSPPASPLQHLLPGK AGESPQPKAAPEASSP LQHLLPGKAVDLGPPK K A A G K A 4 0 0 0 0 1 1 1 1 0 3 1 0 0 5 3 0 0 0 0 0 0 20 0 1967.0476 Q96TA1 Q96TA1 686 705 FAM129B Niban-like protein 1 yes yes 2 0.0049214 70.563 By matching By MS/MS 1 1 2985800 133610 2852100 15 1935 16 45;46 40 40 2742;2743 1 AAPQSPSVPK QELVNQSKAAPQSPSV PQSPSVPKKPGPPVLS K A A P K K 2 0 0 0 0 1 0 0 0 0 0 1 0 0 3 2 0 0 0 1 0 0 10 0 980.5291 E9PF10;O75694 E9PF10 924 933 NUP155 Nuclear pore complex protein Nup155 yes no 2 0.00045505 110.54 By MS/MS By MS/MS 1 1 11684000 5132400 6552100 16 619 17 47;48 41;42 42 845;846 2 AAQRGHWRSNVSANNNSGSR LEEVGARRAAQRGHWR ANNNSGSRCPESWDPV R A A S R C 3 3 4 0 0 1 0 2 1 0 0 0 0 0 0 4 0 1 0 1 0 0 20 2 2168.0332 H7C175;Q6ZMQ8 H7C175 569 588 AATK Serine/threonine-protein kinase LMTK1 yes no 2 0.01088 43.382 By matching By MS/MS 1 1 5373100 3776000 1597100 17 954 18 49;50 43 43 134;135 1 AASAAAASAAAASAASGSPGPGEGSAGGEK ________________ EGSAGGEKRSTAPSAA M A A E K R 13 0 0 0 0 0 2 6 0 0 0 1 0 0 2 6 0 0 0 0 0 0 30 0 2386.0997 Q13263 Q13263 2 31 TRIM28 Transcription intermediary factor 1-beta yes yes 3 0.0010384 52.739 By matching By MS/MS 1 1 1484900 772970 711880 18 1498 19 51;52 44 44 2049;2050 0 AASAPAKESPR SGKTSQVGAASAPAKE APAKESPRKGAAPAPP G A A P R K 4 1 0 0 0 0 1 0 0 0 0 1 0 0 2 2 0 0 0 0 0 0 11 1 1083.5673 J3KQ96;E7ETY2;Q13428 J3KQ96 373 383 TCOF1 Treacle protein yes no 2;3 2.481E-09 98.337 By MS/MS By MS/MS 2 2 161460000 65385000 96078000 19 591 20 53;54;55;56 45;46;47 45 792 3 AASLTEDRDR SQPEGLRKAASLTEDR SLTEDRDRGRDAVKRE K A A D R G 2 2 0 2 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 10 1 1132.5473 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1044 1053 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 0.0001532 116.74 By matching By MS/MS 1 1 10236000 5145300 5090500 20 595 21 57;58 48 48 806 1 AASPPASASDLIEQQQK IKVIRNMRAASPPASA DLIEQQQKRGRREHKA R A A Q K R 4 0 0 1 0 3 1 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 17 0 1739.869 Q5VSL9 Q5VSL9 333 349 STRIP1 Striatin-interacting protein 1 yes yes 2;3 9.9942E-06 96.773 By MS/MS By MS/MS 1 2 13467000 4954200 8513200 21 1642 22 59;60;61 49;50;51 50 2289 3 AASPPASASDLIEQQQKR IKVIRNMRAASPPASA LIEQQQKRGRREHKAL R A A K R G 4 1 0 1 0 3 1 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 18 1 1895.9701 Q5VSL9 Q5VSL9 333 350 STRIP1 Striatin-interacting protein 1 yes yes 3 0.013092 42.191 By MS/MS 1 1463800 1463800 0 22 1642 23 62 52 52 2289 1 AASPSPQSVR PEPKKIKKAASPSPQS SPSPQSVRRVSSSRSV K A A V R R 2 1 0 0 0 1 0 0 0 0 0 0 0 0 2 3 0 0 0 1 0 0 10 0 998.51451 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 745 754 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0098533 65.179 By MS/MS By MS/MS 1 1 8852400 4208400 4644000 23 346 24 63;64 53;54;55 54 487 3 AASREEPIEWEF SIIHRLEKAASREEPI EEPIEWEF________ K A A E F - 2 1 0 0 0 0 4 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 12 1 1462.6729 P39880 P39880 1494 1505 CUX1 Homeobox protein cut-like 1 yes yes 2 0.016356 66.285 By MS/MS By matching 1 1 15277000 6040000 9236800 24 1346 25 65;66 56 56 1769 1 AASSAAQGAFQGN FSSRTFHRAASSAAQG AQGAFQGN________ R A A G N - 5 0 1 0 0 2 0 2 0 0 0 0 0 1 0 2 0 0 0 0 0 0 13 0 1178.5316 O15127 O15127 317 329 SCAMP2 Secretory carrier-associated membrane protein 2 yes yes 2 0.0066305 64.313 By matching By MS/MS 1 1 2669900 1127400 1542500 25 1105 26 67;68 57 57 1474 1 AASSSSPGSPVASSPSR FEKPESPRAASSSSPG PVASSPSRLSPTPDGP R A A S R L 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 8 0 0 0 1 0 0 17 0 1530.7274 Q92538 Q92538 1776 1792 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0012946 88.319 By MS/MS By MS/MS 1 1 3715800 1765700 1950100 26 1848 27 69;70 58;59 58 2603 2 AASSSSVVPYLPR EVAEELGRAASSSSVV SVVPYLPRLPILPSKT R A A P R L 2 1 0 0 0 0 0 0 0 0 1 0 0 0 2 4 0 0 1 2 0 0 13 0 1332.7038 P42684 P42684 559 571 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.00036515 76.143 By MS/MS By MS/MS 1 1 1608500 795790 812690 27 1358 28 71;72 60;61;62 60 4293 3 AASTDLGAGETVVGK RGRRQAKKAASTDLGA AGETVVGKVLEITELP K A A G K V 3 0 0 1 0 0 1 3 0 0 1 1 0 0 0 1 2 0 0 2 0 0 15 0 1374.6991 Q15032;H7C207 Q15032 971 985 R3HDM1 R3H domain-containing protein 1 yes no 2 0.013802 53.237 By MS/MS By matching 1 1 2904000 1495300 1408700 28 1536 29 73;74 63 63 2117 1 AAVGQESPGGLEAGNAK PINKGRKRAAVGQESP GLEAGNAKAPKLQDLA R A A A K A 4 0 1 0 0 1 2 4 0 0 1 1 0 0 1 1 0 0 0 1 0 0 17 0 1554.7638 Q29RF7 Q29RF7 1299 1315 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 1.7368E-58 154.39 By MS/MS By MS/MS 1 1 21046000 10774000 10272000 29 1579 30 75;76 64;65 65 2183 2 AAVLSDSEDEEKASAK EEKVAKRKAAVLSDSE DEEKASAKKSRVVSDA K A A A K K 4 0 0 2 0 0 3 0 0 0 1 2 0 0 0 3 0 0 0 1 0 0 16 1 1648.7792 Q96ST2 Q96ST2 394 409 IWS1 Protein IWS1 homolog yes yes 2 0.0063267 65.477 By matching By MS/MS 1 1 7520000 3310900 4209100 30 1930 31 77;78 66 66 2724;2725 1 AAVLSDSEDEEKASAKK EEKVAKRKAAVLSDSE EEKASAKKSRVVSDAD K A A K K S 4 0 0 2 0 0 3 0 0 0 1 3 0 0 0 3 0 0 0 1 0 0 17 2 1776.8741 Q96ST2 Q96ST2 394 410 IWS1 Protein IWS1 homolog yes yes 3 0.021046 51.591 By MS/MS By matching 1 1 11811000 6454600 5356300 31 1930 32 79;80 67 67 2724;2725 1 AAVQELSSSILAGEDPEER HRSTPESRAAVQELSS AGEDPEERGVKLGLGD R A A E R G 3 1 0 1 0 1 4 1 0 1 2 0 0 0 1 3 0 0 0 1 0 0 19 0 1999.9698 E7ES96;P49768 E7ES96 267 285 PSEN1 Presenilin;Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 yes no 2 2.3662E-06 99.021 By MS/MS 1 5530200 0 5530200 32 581 33 81 68 68 777 1 AAVSAFPTDSLER QSFFAAARAAVSAFPT FPTDSLERDLSPSSAP R A A E R D 3 1 0 1 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 1 0 0 13 0 1362.6779 O14654 O14654 1098 1110 IRS4 Insulin receptor substrate 4 yes yes 2 4.374E-22 144.8 By MS/MS By MS/MS 1 1 11090000 4506400 6583300 33 1094 34 82;83 69;70 70 1449 2 AAVVTSPPPTTAPHK ________________ PPTTAPHKERYFDRVD R A A H K E 3 0 0 0 0 0 0 0 1 0 0 1 0 0 4 1 3 0 0 2 0 0 15 0 1472.7987 E7EV99;E7ENY0;P35611;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 E7EV99 7 21 ADD1 Alpha-adducin yes no 2 6.8137E-38 147.7 By MS/MS By MS/MS 1 1 25349000 12118000 13231000 34 568 35 84;85 71;72;73;74 72 750 4 ACLDDSYASGEGLKR SGNGTLSRACLDDSYA ASGEGLKRSALSSSLR R A C K R S 2 1 0 2 1 0 1 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 15 1 1640.7464 A0A0C4DGT3;A0A087WWK8;Q6DN90 A0A0C4DGT3 783 797 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2;3 2.9913E-05 81.619 By MS/MS By MS/MS 2 1 4829500 2926200 1903300 35 65 36 86;87;88 75;76;77 75 4008 3 ACNLDVILGFDGSR PGVTDAAKACNLDVIL ILGFDGSRDQNVFVAQ K A C S R D 1 1 1 2 1 0 0 2 0 1 2 0 0 1 0 1 0 0 0 1 0 0 14 0 1535.7402 E7ENL6;P12111 E7ENL6 1227 1240 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.00047382 77.64 By MS/MS By matching 1 1 911930 435310 476620 36 567 37 89;90 78 78 1 ACPEEPAAPSPEPR ELASPEERACPEEPAA AAPSPEPRVWLEDPAS R A C P R V 3 1 0 0 1 0 3 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 14 0 1506.6773 O94819 O94819 98 111 KBTBD11 Kelch repeat and BTB domain-containing protein 11 yes yes 2 0.0023993 70.98 By MS/MS By matching 1 1 2687600 1450100 1237500 37 1175 38 91;92 79 79 1570 1 ADAPDAGAQSDSELPSYHQNDVSLDR AALQATARADAPDAGA QNDVSLDRGYTSDSEV R A D D R G 4 1 1 5 0 2 1 1 1 0 2 0 0 0 2 4 0 0 1 1 0 0 26 0 2757.2114 Q92538 Q92538 1289 1314 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 3 0.01331 41.491 By MS/MS 1 31573000 31573000 0 38 1848 39 93 80 80 2604;2605 1 ADDADEFGYSR LWRYGDFRADDADEFG ADEFGYSR________ R A D S R - 2 1 0 3 0 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 11 0 1244.4946 Q7KZF4 Q7KZF4 900 910 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.00087214 94.465 By MS/MS By MS/MS 1 1 3300800 1571300 1729500 39 1702 40 94;95 81;82 81 4380 2 ADEASELACPTPK KLQELSSKADEASELA ELACPTPKEDGLAQQQ K A D P K E 3 0 0 1 1 0 2 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 13 0 1387.6289 A0A0U1RQF0;P49327 A0A0U1RQF0 2192 2204 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 5.8473E-07 113.44 By MS/MS By MS/MS 1 1 4463700 1777200 2686600 40 261 41 96;97 83;84 84 3306 2 ADEASELACPTPKEDGLAQQQTQLNLR KLQELSSKADEASELA QQTQLNLRSLLVNPEG K A D L R S 4 1 1 2 1 4 3 1 0 0 4 1 0 0 2 1 2 0 0 0 0 0 27 1 2982.4353 A0A0U1RQF0;P49327 A0A0U1RQF0 2192 2218 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 3 0.013762 52.657 By matching By MS/MS 1 1 8258300 3315800 4942500 41 261 42 98;99 85 85 3306 1 ADGEYWLGLQNMHLLTLK DYKLGFGRADGEYWLG NMHLLTLKQKYELRVD R A D L K Q 1 0 1 1 0 1 1 2 1 0 5 1 1 0 0 0 1 1 1 0 0 0 18 0 2101.0666 K7ES70;P55083 K7ES70 131 148 MFAP4 Microfibril-associated glycoprotein 4 yes no 3 0.0074617 46.249 By matching By MS/MS 1 1 1649700 919230 730420 42 1054 43 100;101 86 86 121 1 ADGGAEYATYQTK QRRKKKGKADGGAEYA EYATYQTKSTTPAEQR K A D T K S 3 0 0 1 0 1 1 2 0 0 0 1 0 0 0 0 2 0 2 0 0 0 13 0 1373.6099 R4GN18 R4GN18 57 69 CD46 yes yes 2 0.00028481 85.924 By MS/MS 1 1699100 0 1699100 43 2180 44 102 87 87 4470 1 ADGYEPPVQESV ETGAKVERADGYEPPV EPPVQESV________ R A D S V - 1 0 0 1 0 1 2 1 0 0 0 0 0 0 2 1 0 0 1 2 0 0 12 0 1289.5776 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 216 227 RPS3A 40S ribosomal protein S3a yes no 2 0.00094122 78.655 By MS/MS By MS/MS 2 2 11657000 5851500 5805500 44 527 45 103;104;105;106 88;89;90 90 713;4134 3 ADIVFLLDGSINFR PSRPEKKKADIVFLLD LDGSINFRRDSFQEVL K A D F R R 1 1 1 2 0 0 0 1 0 2 2 0 0 2 0 1 0 0 0 1 0 0 14 0 1578.8406 E7ENL6;P12111 E7ENL6 1031 1044 COL6A3 Collagen alpha-3(VI) chain yes no 2 1.1958E-06 106.49 By MS/MS By MS/MS 1 1 1951800 1951800 0 45 567 46 107;108 91;92 91 2 ADIVFLVDGSYSIGIANFVK CSRGVDIKADIVFLVD IGIANFVKVRAFLEVL K A D V K V 2 0 1 2 0 0 0 2 0 3 1 1 0 2 0 2 0 0 1 3 0 0 20 0 2127.1252 D6RGG3;Q99715 D6RGG3 439 458 COL12A1 Collagen alpha-1(XII) chain yes no 2 1.764E-06 92.935 By MS/MS By MS/MS 1 1 5772800 0 5772800 46 538 47 109;110 93;94 93 2 ADLNQGIGEPQSPSR LSAKLLRRADLNQGIG GEPQSPSRRVFNPYTE R A D S R R 1 1 1 1 0 2 1 2 0 1 1 0 0 0 2 2 0 0 0 0 0 0 15 0 1567.759 Q96C19 Q96C19 63 77 EFHD2 EF-hand domain-containing protein D2 yes yes 2 0.0027566 66.673 By matching By MS/MS 1 1 5054600 2188100 2866500 47 1879 48 111;112 95 95 2650;2651 1 ADLVFMVDGSWSIGDENFNK KEVCKAAKADLVFMVD IGDENFNKIISFLYST K A D N K I 1 0 2 3 0 0 1 2 0 1 1 1 1 2 0 2 0 1 0 2 0 0 20 0 2243.0205 Q05707 Q05707 1031 1050 COL14A1 Collagen alpha-1(XIV) chain yes yes 2 0.012489 67.234 By MS/MS 1 4141200 0 4141200 48 1466 49 113 96 96 198 1 ADNDAASMPCTR TCDRGFFRADNDAASM AASMPCTRPPSAPLNL R A D T R P 3 1 1 2 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 0 12 0 1307.5234 E9PG71;P54764;H7C1N8 E9PG71 316 327 EPHA4 Receptor protein-tyrosine kinase;Ephrin type-A receptor 4 yes no 3 0.022292 44.543 By matching By MS/MS 1 1 1571600 658620 912940 49 631 50 114;115 97 97 0 ADQPVEEGESASLAKK A D K K 3 0 0 1 0 1 3 1 0 0 1 2 0 0 1 2 0 0 0 1 0 0 16 1 1657.8159 REV__O95831 yes yes 3 0.01312 43.024 By matching By MS/MS 1 2 2978100 692700 2285400 + 50 2204 51 116;117;118 98 98 3190;3191 1 ADRDQYELLCLDNTR IFENLANKADRDQYEL LLCLDNTRKPVDEYKD K A D T R K 1 2 1 3 1 1 1 0 0 0 3 0 0 0 0 0 1 0 1 0 0 0 15 1 1880.8687 P02787;C9JVG0 P02787 237 251 TF Serotransferrin yes no 3 0.0035246 56.872 By MS/MS By matching 1 1 917190 581300 335890 51 1213 52 119;120 99 99 1 ADTGTTFQLFRK A D R K 1 1 0 1 0 1 0 1 0 0 1 1 0 2 0 0 3 0 0 0 0 0 12 1 1383.7147 REV__A0A0D9SG63 yes no 2 0.022465 63.534 By matching By MS/MS 1 1 3453300 1990300 1463000 + 52 2187 53 121;122 100 100 3992 0 AEADIVLLVDGSWSIGR SGMECLTRAEADIVLL DGSWSIGRANFRTVRS R A E G R A 2 1 0 2 0 0 1 2 0 2 2 0 0 0 0 2 0 1 0 2 0 0 17 0 1799.9418 D6RGG3;Q99715;A0A087X0A8 D6RGG3 1196 1212 COL12A1 Collagen alpha-1(XII) chain yes no 2;3 7.1484E-16 142.57 By MS/MS By MS/MS 15 15 50652000 17607000 33045000 53 538 54 123;124;125;126;127;128;129;130;131;132;133;134;135;136;137;138;139;140;141;142;143;144;145;146;147;148;149;150;151;152 101;102;103;104;105;106;107;108;109;110;111;112;113;114;115;116;117;118;119;120;121;122;123;124;125;126;127;128 126 24 AEAGAGSATEFQFR VPPGADKKAEAGAGSA SATEFQFRGGFGRGRG K A E F R G 4 1 0 0 0 1 2 2 0 0 0 0 0 2 0 1 1 0 0 0 0 0 14 0 1440.6634 P46783;Q9NQ39 P46783 140 153 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 2 0.0037175 68.168 By matching By MS/MS 1 1 1743700 649000 1094700 54 1366 55 153;154 129 129 1804 1 AEDGATPSPSNETPK ASSTSSPKAEDGATPS SPSNETPKKKKKRFSF K A E P K K 2 0 1 1 0 0 2 1 0 0 0 1 0 0 3 2 2 0 0 0 0 0 15 0 1499.674 P29966 P29966 138 152 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 1.2326E-146 194.23 By MS/MS By MS/MS 2 2 33574000 13945000 19629000 55 1325 56 155;156;157;158 130;131;132;133;134;135;136 131 1742;1743;3675;3676 7 AEDGATPSPSNETPKK ASSTSSPKAEDGATPS PSNETPKKKKKRFSFK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 2 0 0 3 2 2 0 0 0 0 0 16 1 1627.7689 P29966 P29966 138 153 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 2.3119E-20 122.5 By MS/MS By MS/MS 2 2 19357000 8501600 10855000 56 1325 57 159;160;161;162 137;138;139;140;141 138 1742;1743;3675;3676 5 AEDGATPSPSNETPKKK ASSTSSPKAEDGATPS SNETPKKKKKRFSFKK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 3 0 0 3 2 2 0 0 0 0 0 17 2 1755.8639 P29966 P29966 138 154 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 1.1987E-29 135.72 By MS/MS By MS/MS 2 2 82394000 35420000 46974000 57 1325 58;59 163;164;165;166 142;143;144;145 143 1742;1743;3675;3676 4 AEEDEILNRSPR EEEDRKPKAEEDEILN EILNRSPRNRKPRRE_ K A E P R N 1 2 1 1 0 0 3 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1427.7005 P27824 P27824 574 585 CANX Calnexin yes yes 2 0.0040414 73.841 By MS/MS By MS/MS 2 3 1164000000 584080000 579960000 58 1316 60;61 167;168;169;170;171 146;147;148;149 148 187 1733 4 AEEKENDTVTISPK LAPEANPKAEEKENDT DTVTISPKQEGFPPKG K A E P K Q 1 0 1 1 0 0 3 0 0 1 0 2 0 0 1 1 2 0 0 1 0 0 14 1 1559.7679 Q9UGU0 Q9UGU0 1511 1524 TCF20 Transcription factor 20 yes yes 2;3 0.0066409 70.451 By MS/MS By matching 2 2 6560800 3576200 2984700 59 2096 62 172;173;174;175 150;151 150 3001 1 AEEKSPISINVK PSSPREVKAEEKSPIS SPISINVKTVKKEPED K A E V K T 1 0 1 0 0 0 2 0 0 2 0 2 0 0 1 2 0 0 0 1 0 0 12 1 1313.7191 Q9UK58 Q9UK58 348 359 CCNL1 Cyclin-L1 yes yes 2;3 9.0727E-264 230.69 By matching By MS/MS 2 2 42835000 18709000 24126000 60 2105 63 176;177;178;179 152;153 153 3012 2 AEFAEYASVDR PGPQTEGKAEFAEYAS AEYASVDRNKKCRQSV K A E D R N 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 11 0 1256.5673 Q9NWQ8 Q9NWQ8 222 232 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 0.00064856 98.048 By MS/MS By MS/MS 1 1 7924300 3322600 4601800 61 2065 64 180;181 154;155 154 4444 2 AEFLNKSVQK SSLKIEERAEFLNKSV FLNKSVQKSGVKSTHQ R A E Q K S 1 0 1 0 0 1 1 0 0 0 1 2 0 1 0 1 0 0 0 1 0 0 10 1 1162.6346 E7EX44;Q05682;C9J813;E9PGZ1 E7EX44 415 424 CALD1 Caldesmon yes no 2 0.01968 64.224 By MS/MS 1 0 0 0 62 604 65 182 156 156 833 1 AEFTSPPSLFK ETALPSTKAEFTSPPS TSPPSLFKTGLPPSRN K A E F K T 1 0 0 0 0 0 1 0 0 0 1 1 0 2 2 2 1 0 0 0 0 0 11 0 1222.6234 Q6UN15;A0A0B4J203 Q6UN15 255 265 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 2 0.0081433 65.179 By MS/MS 1 658310 0 658310 63 1690 66 183 157 157 2362 1 AEGEPQEESPLKSK SQEKQTKKAEGEPQEE EESPLKSKSQEEPKDT K A E S K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 2 0 0 0 0 0 0 14 1 1527.7417 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 169 182 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 6.9968E-37 151.49 By MS/MS By MS/MS 1 1 17419000 6820300 10599000 64 2073 67 184;185 158;159 159 2966 2 AEGEWEDQEALDYFSDKESGK EKGSEKGRAEGEWEDQ FSDKESGKQKFNDSEG R A E G K Q 2 0 0 3 0 1 5 2 0 0 1 2 0 1 0 2 0 1 1 0 0 0 21 1 2432.0292 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 371 391 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0033485 58.082 By MS/MS 1 10386000 10386000 0 65 2073 68 186 160 160 2967 1 AEIYALNR QELKQRQRAEIYALNR AEIYALNRVMTELEQQ R A E N R V 2 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 8 0 948.50288 Q8N300 Q8N300 37 44 CCDC23 Coiled-coil domain-containing protein 23 yes yes 2 0.0089503 76.774 By MS/MS By MS/MS 1 1 2120300 1044500 1075800 66 1772 69 187;188 161;162 161 4393 2 AELNFEDFYR HFFGKKGKAELNFEDF LNFEDFYRFMDNLQTE K A E Y R F 1 1 1 1 0 0 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 10 0 1302.5881 H0YAN7;Q86XE3 H0YAN7 198 207 MICU3 Calcium uptake protein 3, mitochondrial yes no 2 0.0089047 73.26 By matching By MS/MS 1 1 1376700 718430 658310 67 863 70 189;190 163 163 1 AELSYRGPVSGTEPEPVYSMEAADYR YEDAASFKAELSYRGP SMEAADYREASSQQGL K A E Y R E 3 2 0 1 0 0 4 2 0 0 1 0 1 0 3 3 1 0 3 2 0 0 26 1 2873.3178 Q14247;H0YEV2;H0YCD9 Q14247 429 454 CTTN Src substrate cortactin yes no 3 0.017882 41.084 By matching By MS/MS 1 2 9592800 1650100 7942700 68 1519 71;72 191;192;193 164;165 165 214 2081;4350;4351 2 AENIMASLER DETSSQGKAENIMASL NIMASLERSMHPELMK K A E E R S 2 1 1 0 0 0 2 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 10 0 1132.5547 A0A0J9YW64;A6NIW2;Q5JSL3 A0A0J9YW64 116 125 DOCK11 Dedicator of cytokinesis protein 11 yes no 2 0.014332 49.418 By MS/MS 1 321620 0 321620 69 250 73 194 166 166 44 38 0 AENPAGHGSK VASAAPEKAENPAGHG NPAGHGSKEVKGKTHT K A E S K E 2 0 1 0 0 0 1 2 1 0 0 1 0 0 1 1 0 0 0 0 0 0 10 0 966.45191 B4DEM9;Q9Y2S7 B4DEM9 97 106 POLDIP2 Polymerase delta-interacting protein 2 yes no 2 0.015007 63.216 By MS/MS 1 389960 389960 0 70 373 74 195 167 167 1 AEPSEVDMNSPK KAKQVKKKAEPSEVDM EVDMNSPKSKKAKKKE K A E P K S 1 0 1 1 0 0 2 0 0 0 0 1 1 0 2 2 0 0 0 1 0 0 12 0 1302.5762 Q9NR30 Q9NR30 62 73 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.011762 59.607 By MS/MS By matching 1 1 2556500 1113600 1442900 71 2045 75 196;197 168 168 2920 1 AEPVEVVAPR SPWGAEVKAEPVEVVA PVEVVAPRGKSGAALS K A E P R G 2 1 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 3 0 0 10 0 1065.5819 P09874 P09874 487 496 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0028123 100.02 By MS/MS By MS/MS 1 1 16368000 7342500 9025500 72 1244 76 198;199 169;170 170 2 AESIAGLRFWNYNK VVTIRLDRAESIAGLR LRFWNYNKSPEDTYRG R A E N K S 2 1 2 0 0 0 1 1 0 1 1 1 0 1 0 1 0 1 1 0 0 0 14 1 1667.842 O60303 O60303 1304 1317 KIAA0556 Uncharacterized protein KIAA0556 yes yes 2 0.01913 47.261 By MS/MS 1 0 0 0 73 1136 77 200 171 171 155;156 1511 1 AESPDLR KWQDRYGRAESPDLRR RAESPDLRRLPGAIDV R A E L R R 1 1 0 1 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 7 0 786.38718 Q6UN15;A0A0B4J203 Q6UN15 302 308 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 2 0.017623 85.862 By MS/MS By matching 1 1 3052300 1305000 1747300 74 1690 78 201;202 172 172 2363 1 AESPESSAIESTQSTPQK VSRRAQQRAESPESSA STQSTPQKGRGRPSKT R A E Q K G 2 0 0 0 0 2 3 0 0 1 0 1 0 0 2 5 2 0 0 0 0 0 18 0 1875.8698 Q9NTI5 Q9NTI5 1356 1373 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 2;3 0.0012938 68.845 By matching By MS/MS 2 2 53756000 29077000 24679000 75 2054 79 203;204;205;206 173;174 174 2930;2931;2932 2 AESPSPAPPPGLR VAEGGLPRAESPSPAP PAPPPGLRGTLDLQVI R A E L R G 2 1 0 0 0 0 1 1 0 0 1 0 0 0 5 2 0 0 0 0 0 0 13 0 1274.6619 Q9BUA3 Q9BUA3 306 318 C11orf84 Uncharacterized protein C11orf84 yes yes 2 0.0055453 66.92 By MS/MS By MS/MS 1 1 16133000 6774700 9358500 76 1962 80 207;208 175;176;177 177 2781 3 AEYVPSTPSPVPPSTPLLSAHSK ILLGGDYRAEYVPSTP PLLSAHSKTGSRDCST R A E S K T 2 0 0 0 0 0 1 0 1 0 2 1 0 0 6 5 2 0 1 2 0 0 23 0 2361.2216 Q4VCS5;E7ERM3 Q4VCS5 834 856 AMOT Angiomotin yes no 3 0.012454 43.936 By MS/MS By MS/MS 1 1 5857700 2557900 3299800 77 1590 81 209;210 178;179 178 2198;2199;3780 2 AFEGPILLDMR QEPLDKDKAFEGPILL GPILLDMRIKHLIKTN K A F M R I 1 1 0 1 0 0 1 1 0 1 2 0 1 1 1 0 0 0 0 0 0 0 11 0 1260.6536 J3KNV1 J3KNV1 180 190 ZNF292 yes yes 3 0.016428 44.425 By MS/MS 1 0 0 0 78 1000 82 211 180 180 1 AFENVTDLQWLILDHNLLENSK QIDHIDEKAFENVTDL HNLLENSKIKGRVFSK K A F S K I 1 0 3 2 0 1 2 0 1 1 5 1 0 1 0 1 1 1 0 1 0 0 22 0 2611.3282 P51884;CON__Q05443 P51884 85 106 LUM Lumican yes no 3 0.004981 63.936 By MS/MS 1 3485300 0 3485300 79 1397 83 212 181 181 199 1 AFGPGLQGGSAGSPAR PTKPSKVKAFGPGLQG GSAGSPARFTIDTKGA K A F A R F 3 1 0 0 0 1 0 5 0 0 1 0 0 1 2 2 0 0 0 0 0 0 16 0 1428.711 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 1072 1087 FLNA Filamin-A yes no 2 0.0013643 73.296 By MS/MS By MS/MS 1 1 7946000 4034200 3911800 80 1302 84 213;214 182;183 183 1711 2 AFGSGIDIKPGTPPIAGR KMSEMELKAFGSGIDI GTPPIAGRSTTPTSSP K A F G R S 2 1 0 1 0 0 0 4 0 3 0 1 0 1 3 1 1 0 0 0 0 0 18 1 1752.9523 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2664 2681 PRRC2C Protein PRRC2C yes no 3 0.011918 65.467 By MS/MS By MS/MS 1 1 10324000 5006900 5317200 81 570 85 215;216 184;185 185 3406 2 AFLAELEQNSPK KAQAESNKAFLAELEQ ELEQNSPKIQKVKEAL K A F P K I 2 0 1 0 0 1 2 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 12 0 1345.6878 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 1558 1569 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 0.0037803 72.34 By MS/MS 1 1575200 1575200 0 82 818 86 217 186 186 1098 1 AFNRSSNLMEHK YKCEECGKAFNRSSNL SSNLMEHKRIHTGEKP K A F H K R 1 1 2 0 0 0 1 0 1 0 1 1 1 1 0 2 0 0 0 0 0 0 12 1 1432.6881 P0DKX0 P0DKX0 320 331 ZNF728 Zinc finger protein 728 yes yes 2 0.00085927 71.241 By MS/MS By MS/MS 2 2 161140000 74894000 86242000 83 1247 87;88 218;219;220;221 187;188;189;190;191;192;193 187 170;171 155 1646;1647 7 AFSEGQITR SRKKTVRRAFSEGQIT FSEGQITRRMNPTRSA R A F T R R 1 1 0 0 0 1 1 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 9 0 1007.5036 Q96GN5 Q96GN5 259 267 CDCA7L Cell division cycle-associated 7-like protein yes yes 2 0.014344 67.08 By MS/MS By matching 1 1 1950000 949850 1000100 84 1894 89 222;223 194 194 2673 1 AFSTVPLTPVPR ILQSSDSRAFSTVPLT VPLTPVPRPSDSVSST R A F P R P 1 1 0 0 0 0 0 0 0 0 1 0 0 1 3 1 2 0 0 2 0 0 12 0 1283.7238 H0Y5D5;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3 H0Y5D5 482 493 CIZ1 Cip1-interacting zinc finger protein yes no 2 0.016776 67.952 By MS/MS 1 830820 0 830820 85 713 90 224 195 195 3472 1 AFVAIGDYNGHVGLGVK YLFSLPIKAFVAIGDY GHVGLGVKCSKEVATA K A F V K C 2 0 1 1 0 0 0 4 1 1 1 1 0 1 0 0 0 0 1 3 0 0 17 0 1715.8995 H0YEN5;P15880;I3L404;E9PPT0;E9PM36;E9PMM9 H0YEN5 28 44 RPS2 40S ribosomal protein S2 yes no 3 2.2883E-09 103.83 By MS/MS 1 410590 410590 0 86 881 91 225 196 196 1 AFVEDSEDEDGAGEGGSSLLQK KQLKESFRAFVEDSED GGSSLLQKRAKTRQEK R A F Q K R 2 0 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 22 0 2238.9764 H0YFD2;F8WFC1;Q8N9T8 H0YFD2 110 131 KRI1 Protein KRI1 homolog yes no 2 2.8144E-11 102.5 By MS/MS By MS/MS 1 1 50470000 25684000 24785000 87 775 92 226;227 197;198 198 1034 2 AFVEDSEDEDGAGEGGSSLLQKR KQLKESFRAFVEDSED GSSLLQKRAKTRQEKA R A F K R A 2 1 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 23 1 2395.0775 H0YFD2;F8WFC1;Q8N9T8 H0YFD2 110 132 KRI1 Protein KRI1 homolog yes no 3 0.00029103 63.302 By MS/MS 1 32678000 0 32678000 88 775 93 228 199 199 1034 1 AFVHWYVGEGMEEGEFSEAR FDLMYAKRAFVHWYVG EGEFSEAREDMAALEK R A F A R E 2 1 0 0 0 0 5 3 1 0 0 0 1 2 0 1 0 1 1 2 0 0 20 0 2329.011 P68363;F5H5D3;Q9BQE3;Q71U36;P68366;Q13748;C9J2C0;Q9NY65 P68363 403 422 TUBA1B;TUBA1C;TUBA1A;TUBA4A;TUBA3C;TUBA8 Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-4A chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain yes no 3 3.5115E-26 118.48 By matching By MS/MS 1 1 5420800 486340 4934500 89 1439 94 229;230 200 200 194 1 AGAESPTMSVDGR RVHKKDRRAGAESPTM PTMSVDGRQPGTCSPD R A G G R Q 2 1 0 1 0 0 1 2 0 0 0 0 1 0 1 2 1 0 0 1 0 0 13 0 1276.5718 O75362 O75362 403 415 ZNF217 Zinc finger protein 217 yes yes 2 0.00093941 74.78 By MS/MS By MS/MS 1 1 3554400 1782800 1771600 90 1157 95 231;232 201;202 202 1541 2 AGAFCLSEDAGLGISSTASLR PDTITEWKAGAFCLSE ISSTASLRAFQPFFVE K A G L R A 4 1 0 1 1 0 1 3 0 1 3 0 0 1 0 4 1 0 0 0 0 0 21 0 2082.0052 P01023;P20742 P01023 767 787 A2M;PZP Alpha-2-macroglobulin;Pregnancy zone protein yes no 3 0.019902 27.964 By matching By MS/MS 1 1 804730 416780 387950 91 1206 96 233;234 203 203 1 AGAGMITQHSSNASPINR TRRMGDGRAGAGMITQ SNASPINRIVQISGNS R A G N R I 3 1 2 0 0 1 0 2 1 2 0 0 1 0 1 3 1 0 0 0 0 0 18 0 1810.8744 Q9NWH9;H7C3F4;H0YKH2 Q9NWH9 989 1006 SLTM SAFB-like transcription modulator yes no 3 0.020895 42.257 By MS/MS By matching 1 1 5451500 2464200 2987300 92 2064 97 235;236 204 204 2950 1 AGAPGALSPSYDGGLHGLQSK ________________ GLHGLQSKIEDHLDEA R A G S K I 3 0 0 1 0 1 0 5 1 0 3 1 0 0 2 3 0 0 1 0 0 0 21 0 1981.9858 K7ENH8;A0A0A0MRB7;X6REB3;P15923 K7ENH8 8 28 TCF3 Transcription factor E2-alpha yes no 2;3 0.0019617 63.436 By MS/MS By MS/MS 2 2 12577000 6606900 5970200 93 135 98 237;238;239;240 205;206;207 206 182;183 3 AGATSGELPVVEAENRR RSQTRRGRAGATSGEL VVEAENRRLEAEILAL R A G R R L 3 2 1 0 0 0 3 2 0 0 1 0 0 0 1 1 1 0 0 2 0 0 17 1 1754.8911 F2Z395;Q96LX7 F2Z395 257 273 CCDC17 Coiled-coil domain-containing protein 17 yes no 3 0.020884 38.028 By MS/MS 1 630350 630350 0 94 694 99 241 208 208 0 AGDDYEVLELDDVPK RHERSLGRAGDDYEVL LELDDVPKENSSGSSP R A G P K E 1 0 0 4 0 0 2 1 0 0 2 1 0 0 1 0 0 0 1 2 0 0 15 0 1676.7781 O43164 O43164 59 73 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 2 0.0054606 54.471 By MS/MS By MS/MS 1 1 2479900 1236900 1243000 95 1113 100 242;243 209;210 209 4238 2 AGDLLEDSPK EKGALKRRAGDLLEDS DLLEDSPKRPKEAENP R A G P K R 1 0 0 2 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1043.5135 P51858 P51858 158 167 HDGF Hepatoma-derived growth factor yes yes 2 0.006288 76.357 By MS/MS By MS/MS 1 1 18994000 8362400 10632000 96 1396 101 244;245 211;212 211 1884 2 AGDLLEDSPKRPK EKGALKRRAGDLLEDS EDSPKRPKEAENPEGE R A G P K E 1 1 0 2 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 0 0 0 13 2 1424.7623 P51858 P51858 158 170 HDGF Hepatoma-derived growth factor yes yes 2;3;4 1.0167E-11 130.66 By MS/MS By MS/MS 3 3 281900000 160050000 121850000 97 1396 102 246;247;248;249;250;251 213;214;215;216;217 214 1884 4 AGELTEDEVER ADIDLTKRAGELTEDE LTEDEVERVITIMQNP R A G E R V 1 1 0 1 0 0 4 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 11 0 1246.5677 P62269 P62269 56 66 RPS18 40S ribosomal protein S18 yes yes 2 0.013707 61.56 By matching By MS/MS 1 1 1923700 793050 1130600 98 1430 103 252;253 218 218 1 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR NDVTEGQRAGEPNSPD PAGVHPPR________ R A G P R - 5 1 2 3 1 0 3 3 1 0 0 0 0 0 6 2 1 0 0 2 0 0 30 0 3013.3108 Q08J23 Q08J23 738 767 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 3 2.0714E-14 93.392 By MS/MS By MS/MS 2 2 63968000 35847000 28121000 99 1473 104;105 254;255;256;257 219;220;221;222 219 1988;1989 4 AGFAGDDAPR DNGSGMCKAGFAGDDA FAGDDAPRAVFPSIVG K A G P R A 3 1 0 2 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 10 0 975.44101 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8;P68133;P68032;Q6S8J3;C9JUM1;C9JZR7;A6NL76;P63267;P62736;A5A3E0;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38;P0CG39;F8WCH0 P63261 19 28 ACTG1;ACTB;ACTA1;ACTC1;POTEE;ACTG2;ACTA2;POTEF;POTEI;POTEJ Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J yes no 2 0.0023943 88.177 By MS/MS By MS/MS 1 1 12449000 5203200 7246300 100 1422 106 258;259 223;224 224 2 AGFSWIEVTFK TGQYEREKAGFSWIEV SWIEVTFKNPLVWVHA K A G F K N 1 0 0 0 0 0 1 1 0 1 0 1 0 2 0 1 1 1 0 1 0 0 11 0 1283.655 H7C0L5;B7ZKJ8;Q14624 H7C0L5 567 577 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 0.0023945 92.538 By MS/MS 1 4030300 4030300 0 101 415 107 260 225 225 1 AGGASPAASSTAQPPTQHR GGGGGPVRAGGASPAA AQPPTQHRLVARNGEA R A G H R L 5 1 0 0 0 2 0 2 1 0 0 0 0 0 3 3 2 0 0 0 0 0 19 0 1790.866 Q8IU81 Q8IU81 449 467 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2;3 0.00037877 90.882 By MS/MS By MS/MS 2 2 10790000 5403500 5386600 102 1747 108 261;262;263;264 226;227;228 228 2459 3 AGGFVISDDK HTYQELFRAGGFVISD GFVISDDKILEAVTLV R A G D K I 1 0 0 2 0 0 0 2 0 1 0 1 0 1 0 1 0 0 0 1 0 0 10 0 1007.4924 Q5VWN6 Q5VWN6 2279 2288 FAM208B Protein FAM208B yes yes 2 0.01034 64.567 By MS/MS By matching 1 1 1696400 861190 835170 103 1653 109 265;266 229 229 2311 1 AGGPATPLSPTR MATPLPGRAGGPATPL ATPLSPTRLSRLQEKE R A G T R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 2 0 0 0 0 0 12 0 1123.5986 Q03252 Q03252 29 40 LMNB2 Lamin-B2 yes yes 2 0.0043018 82.705 By MS/MS By MS/MS 3 2 38255000 21857000 16398000 104 1460 110;111 267;268;269;270;271 230;231;232 231 1959;3731 3 AGGPTTPLSPTR VPPRMGSRAGGPTTPL TTPLSPTRLSRLQEKE R A G T R L 1 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 3 0 0 0 0 0 12 0 1153.6091 P20700;A0A0D9SFE5;E9PBF6;A0A0D9SFY5 P20700 15 26 LMNB1 Lamin-B1 yes no 2 0.010311 72.731 By MS/MS By MS/MS 3 3 81880000 40743000 41137000 105 1300 112;113 272;273;274;275;276;277 233;234;235 233 1706;3667;3668 3 AGGSAALSPSK GMAKKVTKAGGSAALS SAALSPSKKRKNSKKK K A G S K K 3 0 0 0 0 0 0 2 0 0 1 1 0 0 1 3 0 0 0 0 0 0 11 0 944.49271 Q92522 Q92522 24 34 H1FX Histone H1x yes yes 2 5.7198E-10 134.21 By MS/MS By MS/MS 1 1 29049000 14182000 14866000 106 1847 114 278;279 236;237;238;239;240;241;242;243 238 2601;2602 8 AGGSAALSPSKK GMAKKVTKAGGSAALS AALSPSKKRKNSKKKN K A G K K R 3 0 0 0 0 0 0 2 0 0 1 2 0 0 1 3 0 0 0 0 0 0 12 1 1072.5877 Q92522 Q92522 24 35 H1FX Histone H1x yes yes 2;3 1.7854E-50 160.87 By MS/MS By MS/MS 2 2 30130000 14979000 15151000 107 1847 115 280;281;282;283 244;245;246;247;248;249 244 2601;2602 6 AGIEIFVVVVGR KAVQEAQRAGIEIFVV IFVVVVGRQVNEPHIR R A G G R Q 1 1 0 0 0 0 1 2 0 2 0 0 0 1 0 0 0 0 0 4 0 0 12 0 1257.7445 A0A087X0S5;P12109 A0A087X0S5 963 974 COL6A1 Collagen alpha-1(VI) chain yes no 2 7.3122E-21 143.7 By MS/MS By MS/MS 5 3 8165400 3759000 4406400 108 102 116 284;285;286;287;288;289;290;291 250;251;252;253;254;255 254 6 AGKYVDEENSDGETSNHR ERKVILEKAGKYVDEE DGETSNHRLQETSSQS K A G H R L 1 1 2 2 0 0 3 2 1 0 0 1 0 0 0 2 1 0 1 1 0 0 18 1 2006.8566 H0YFD2;F8WFC1;Q8N9T8;H0YH26 H0YFD2 71 88 KRI1 Protein KRI1 homolog yes no 3 8.6361E-16 112.57 By MS/MS By MS/MS 1 1 7298800 2767400 4531400 109 775 117 292;293 256;257 257 1035 2 AGLESGAEPGDGDSDTTK SKKDKKAKAGLESGAE DGDSDTTKKKKKKKKA K A G T K K 2 0 0 3 0 0 2 4 0 0 1 1 0 0 1 2 2 0 0 0 0 0 18 0 1705.7279 O60832 O60832 481 498 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 0 228.26 By MS/MS By MS/MS 2 2 30092000 14415000 15677000 110 1148 118;119 294;295;296;297 258;259;260 258 1527;1528;3615;3616 3 AGLESGAEPGDGDSDTTKK SKKDKKAKAGLESGAE GDSDTTKKKKKKKKAK K A G K K K 2 0 0 3 0 0 2 4 0 0 1 2 0 0 1 2 2 0 0 0 0 0 19 1 1833.8228 O60832 O60832 481 499 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2;3 0.0016519 63.374 By MS/MS By MS/MS 2 2 23910000 11439000 12471000 111 1148 120 298;299;300;301 261;262;263 263 1527;1528;3615;3616 3 AGLESGAEPGDGDSDTTKKK SKKDKKAKAGLESGAE DSDTTKKKKKKKKAKE K A G K K K 2 0 0 3 0 0 2 4 0 0 1 3 0 0 1 2 2 0 0 0 0 0 20 2 1961.9178 O60832 O60832 481 500 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 0.0058101 65.833 By MS/MS By matching 1 1 14008000 6939200 7069100 112 1148 121 302;303 264 264 1527;1528;3615;3616 1 AGLGSPERPPK GSPPSVQRAGLGSPER GSPERPPKTSPGSPRL R A G P K T 1 1 0 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 1 1107.6037 Q9H6F5;H0YG79 Q9H6F5 54 64 CCDC86 Coiled-coil domain-containing protein 86 yes no 2 0.0003442 110.8 By MS/MS By MS/MS 1 1 36671000 17246000 19425000 113 2009 122 304;305 265;266 265 2872 2 AGLGSPERPPKTSPGSPR GSPPSVQRAGLGSPER KTSPGSPRLQQGAGLE R A G P R L 1 2 0 0 0 0 1 3 0 0 1 1 0 0 5 3 1 0 0 0 0 0 18 2 1789.9435 Q9H6F5;H0YG79 Q9H6F5 54 71 CCDC86 Coiled-coil domain-containing protein 86 yes no 2 0.022093 52.814 By MS/MS 1 3420500 0 3420500 114 2009 123 306 267 267 2872;2873;3927 1 AGLQFPVGR KAKTRSSRAGLQFPVG GLQFPVGRVHRLLRKG R A G G R V 1 1 0 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 9 0 943.52395 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;C9J0D1;Q71UI9;P0C0S5;Q93077;Q8IUE6;Q7L7L0;P04908;Q96QV6;P16104 A0A0U1RR32 22 30 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;H2AFV;H2AFZ;HIST1H2AC;HIST2H2AB;HIST3H2A;HIST1H2AB;HIST1H2AA;H2AFX Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-C;Histone H2A type 2-B;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX yes no 2 0.010655 83.753 By matching By MS/MS 1 1 3791400 1123700 2667800 115 271 124 307;308 268 268 1 AGSCCLSPGGR LVKEEGPRAGSCCLSP CCLSPGGRAELEGRDK R A G G R A 1 1 0 0 2 0 0 3 0 0 1 0 0 0 1 2 0 0 0 0 0 0 11 0 1120.4754 E7ER32;A0A087X287;B0QY83;A0A087WU73;W0Z7M9;Q969V6 E7ER32 505 515 MKL1;mkl1 MKL/myocardin-like protein 1 yes no 2 0.00058979 104.41 By MS/MS By MS/MS 1 1 2473100 1153900 1319200 116 38 125 309;310 269;270 269 43 2 AGSCCLSPGGRAELEGR LVKEEGPRAGSCCLSP GRAELEGRDKDQMLQE R A G G R D 2 2 0 0 2 0 2 4 0 0 2 0 0 0 1 2 0 0 0 0 0 0 17 1 1775.8043 E7ER32;A0A087X287;B0QY83;A0A087WU73;W0Z7M9;Q969V6 E7ER32 505 521 MKL1;mkl1 MKL/myocardin-like protein 1 yes no 3 0.0017338 64.04 By MS/MS 1 1177700 1177700 0 117 38 126 311 271 271 43 1 AGSFTGTSDPEAAPAR ILAMPRKRAGSFTGTS DPEAAPARTSFSGRSV R A G A R T 4 1 0 1 0 0 1 2 0 0 0 0 0 1 2 2 2 0 0 0 0 0 16 0 1533.7059 J3KQR7;Q9Y4F5 J3KQR7 1178 1193 CEP170B Centrosomal protein of 170 kDa protein B yes no 2 0.00096572 78.191 By MS/MS 1 5239700 0 5239700 118 1008 127 312 272 272 1343 1 AGSISTLDSLDFAR SGGGQLNRAGSISTLD LDSLDFARYSDDGNRE R A G A R Y 2 1 0 2 0 0 0 1 0 1 2 0 0 1 0 3 1 0 0 0 0 0 14 0 1451.7256 A0A075B785;Q9P260 A0A075B785 178 191 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 2 0.010115 57.532 By matching By MS/MS 1 1 2427600 1133300 1294300 119 15 128 313;314 273 273 15 1 AGSQERVCFQDNR WPLTATCRAGSQERVC RVCFQDNRSFNSDSPS R A G N R S 1 2 1 1 1 2 1 1 0 0 0 0 0 1 0 1 0 0 0 1 0 0 13 1 1565.7005 Q8N8K9 Q8N8K9 66 78 KIAA1958 Uncharacterized protein KIAA1958 yes yes 2 0.014468 43.958 By MS/MS By matching 1 1 2818900 1375300 1443700 120 1785 129 315;316 274 274 1 AGSSGNSCITYQPSVSGEHK SGSSFSRRAGSSGNSC PSVSGEHKAQVTTKAE R A G H K A 1 0 1 0 1 1 1 3 1 1 0 1 0 0 1 5 1 0 1 1 0 0 20 0 2064.9171 A6PW57;Q99755 A6PW57 461 480 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha yes no 3 0.012071 40.384 By matching By MS/MS 1 1 2497800 1399300 1098500 121 334 130 317;318 275 275 4064 1 AGSSTPGDAPPAVAEVQGR AGSSEQPRAGSSTPGD AVAEVQGRSDGSGESA R A G G R S 4 1 0 1 0 1 1 3 0 0 0 0 0 0 3 2 1 0 0 2 0 0 19 0 1765.8595 Q7Z6Z7 Q7Z6Z7 2885 2903 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.00368 55.437 By matching By MS/MS 1 1 2180200 1313700 866500 122 1721 131 319;320 276 276 2422 1 AGTDSPVSCASVTEER SESENEPKAGTDSPVS CASVTEERVASDSPKP K A G E R V 2 1 0 1 1 0 2 1 0 0 0 0 0 0 1 3 2 0 0 2 0 0 16 0 1664.7312 E9PEI0;Q69YH5 E9PEI0 691 706 CDCA2 Cell division cycle-associated protein 2 yes no 2 0.018715 49.448 By matching By MS/MS 1 1 3421800 1609200 1812600 123 616 132 321;322 277 277 844 1 AGTGVDNVDLEAATR EKLQVVGRAGTGVDNV VDLEAATRKGILVMNT R A G T R K 3 1 1 2 0 0 1 2 0 0 1 0 0 0 0 0 2 0 0 2 0 0 15 0 1487.7216 Q5SZU1;O43175 Q5SZU1 42 56 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.00015406 84.718 By MS/MS 1 699050 0 699050 124 1115 133 323 278 278 1 AGVSTLESAR GMAGRGVRAGVSTLES VSTLESARGPPSCFSA R A G A R G 2 1 0 0 0 0 1 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 10 0 989.51417 H7C1R9 H7C1R9 245 254 SNED1 yes yes 2 0.012907 58.815 By MS/MS 1 0 0 0 125 958 134 324 279 279 1288;3541 1 AHFNAMFQPSSPTR HRMQLESRAHFNAMFQ FQPSSPTRRPGFSPTS R A H T R R 2 1 1 0 0 1 0 0 1 0 0 0 1 2 2 2 1 0 0 0 0 0 14 0 1589.7409 Q8WUA4;H0Y4Q6 Q8WUA4 883 896 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2;3 0.0017108 64.374 By MS/MS By MS/MS 3 3 27916000 11343000 16573000 126 1832 135;136 325;326;327;328;329;330 280;281;282;283 282 261 2578;2579 4 AHPPVTSAPLSPPQPNDLYK SLATSGVKAHPPVTSA PQPNDLYKNPTSSSEF K A H Y K N 2 0 1 1 0 1 0 0 1 0 2 1 0 0 6 2 1 0 1 1 0 0 20 0 2128.0953 Q4VCS5 Q4VCS5 190 209 AMOT Angiomotin yes yes 3 0.01717 43.523 By MS/MS By MS/MS 1 1 4072900 2026300 2046700 127 1590 137 331;332 284;285;286 286 2200 3 AHSIQIMK MGARHRARAHSIQIMK AHSIQIMKVEEIAASK R A H M K V 1 0 0 0 0 1 0 0 1 2 0 1 1 0 0 1 0 0 0 0 0 0 8 0 926.50077 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 82 89 RPL18A 60S ribosomal protein L18a yes no 2 0.00057376 89.171 By MS/MS 1 0 0 0 128 1071 138 333 287 287 1408 1 AHSPAEGASVESSSPGPK ________________ ESSSPGPKKSDMCEGC R A H P K K 3 0 0 0 0 0 2 2 1 0 0 1 0 0 3 5 0 0 0 1 0 0 18 0 1693.7907 C9J4C4;Q8NFG4 C9J4C4 7 24 FLCN Folliculin yes no 2 1.0146E-05 95.873 By MS/MS 1 812020 0 812020 129 441 139 334 288 288 635 1 AIEPQKEEADENYNSVNTR REIRLQLKAIEPQKEE NYNSVNTRMRKTQHGV K A I T R M 2 1 3 1 0 1 4 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 19 1 2206.0138 Q12846;C9JFM5 Q12846 103 121 STX4 Syntaxin-4 yes no 3 0.0017756 78.272 By MS/MS 1 4438300 4438300 0 130 1479 140 335 289 289 2001 1 AIGGIILTASHNPGGPNGDFGIK SCIIRKIKAIGGIILT PNGDFGIKFNISNGGP K A I I K F 2 0 2 1 0 0 0 6 1 4 1 1 0 1 2 1 1 0 0 0 0 0 23 0 2205.1542 P36871 P36871 108 130 PGM1 Phosphoglucomutase-1 yes yes 3 0.0039352 53.089 By matching By MS/MS 1 1 1000900 283150 717710 131 1343 141 336;337 290 290 189 1767 1 AIGNNSATSPR HHHPPKSRAIGNNSAT NNSATSPRVVVTQPNT R A I P R V 2 1 2 0 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 0 0 0 11 0 1086.5418 A0A1B0GV57;Q9NYJ8 A0A1B0GV57 158 168 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes no 2 3.3947E-05 113.52 By MS/MS By MS/MS 1 1 2812800 1442600 1370100 132 296 142 338;339 291;292;293 292 424 3 AIGSTSKPQESPK SSASPVSRAIGSTSKP SKPQESPKGKRKLDLN R A I P K G 1 0 0 0 0 1 1 1 0 1 0 2 0 0 2 3 1 0 0 0 0 0 13 1 1328.6936 M0QYS5;F5H8D7;P18887 M0QYS5 238 250 XRCC1 DNA repair protein XRCC1 yes no 2;3 1.9043E-06 111.88 By MS/MS By MS/MS 1 2 10621000 5059000 5562100 133 725 143 340;341;342 294;295;296;297 294 964 4 AIINSTITPNMTFTKTSQK IISLDGSKAIINSTIT TFTKTSQKFGQWADSR K A I Q K F 1 0 2 0 0 1 0 0 0 3 0 2 1 1 1 2 5 0 0 0 0 0 19 1 2095.0983 Q86YM7 Q86YM7 55 73 HOMER1 Homer protein homolog 1 yes yes 3 0.013073 46.065 By MS/MS 1 513550 0 513550 134 1743 144 343 298 298 2451;2452;3846;3847 1 AILILDNDGDR EPSLYTVKAILILDND ILDNDGDRLFAKYYDD K A I D R L 1 1 1 3 0 0 0 1 0 2 2 0 0 0 0 0 0 0 0 0 0 0 11 0 1213.6303 F8VXB1;F8VUC5;F8W156;F8W651;F8VXR1;F8VYZ4;F8VVA7;P61923 F8VXB1 15 25 COPZ1 Coatomer subunit zeta-1 yes no 2 0.017583 59.8 By MS/MS 1 351810 0 351810 135 740 145 344 299 299 1 AIPGDQHPESPVHTEPMGIQGR GPCLSPPRAIPGDQHP EPMGIQGRGRQTVDKV R A I G R G 1 1 0 1 0 2 2 3 2 2 0 0 1 0 4 1 1 0 0 1 0 0 22 0 2352.1281 Q14676 Q14676 784 805 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.0033442 55.206 By MS/MS By matching 1 1 8252600 5125400 3127300 136 1523 146 345;346 300 300 2090 1 AIPVSPSAVEEDEDEDGHTVVATAR NNISTVPKAIPVSPSA HTVVATARGIFNSNGG K A I A R G 4 1 0 3 0 0 4 1 1 1 0 0 0 0 2 2 2 0 0 4 0 0 25 0 2593.2144 A0A087X0K9;G5E9E7;G3V1L9;Q07157;H0Y3R8 A0A087X0K9 1521 1545 TJP1 Tight junction protein ZO-1 yes no 3 0.0034587 51.876 By MS/MS By matching 1 1 7705000 3335500 4369500 137 100 147 347;348 301 301 130 1 AIRLELQGPRGSPNAR NKREIEGRAIRLELQG PRGSPNARSQPSKTLF R A I A R S 2 3 1 0 0 1 1 2 0 1 2 0 0 0 2 1 0 0 0 0 0 0 16 2 1733.9649 P19338;H7BY16 P19338 552 567 NCL Nucleolin yes no 4 0.019006 49.149 By MS/MS By matching 1 1 916320 470330 446000 138 1294 148 349;350 302 302 1701 1 AISAPTSPTR AVKRMYDRAISAPTSP SAPTSPTRLSHSGKRS R A I T R L 2 1 0 0 0 0 0 0 0 1 0 0 0 0 2 2 2 0 0 0 0 0 10 0 999.53491 B0QY95;Q9NQG6 B0QY95 53 62 MIEF1 Mitochondrial dynamics protein MID51 yes no 2 2.4234E-05 125.23 By MS/MS By MS/MS 3 2 11296000 5403400 5892600 139 349 149;150 351;352;353;354;355 303;304;305;306;307 305 519;520;3334;3335 3 AISSANLLVR PRQKLSRKAISSANLL SSANLLVRSGSTESRG K A I V R S 2 1 1 0 0 0 0 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1042.6135 G3V1D0;B7WPE2;H0Y3M3;Q32P44 G3V1D0 146 155 EML3 Echinoderm microtubule-associated protein-like 3 yes no 2 0.0021569 93.442 By MS/MS By MS/MS 1 1 2110900 1070800 1040200 140 402 151 356;357 308;309 308 557 2 AISSDMFFGR RQKFAGAKAISSDMFF SSDMFFGREVDAEYEA K A I G R E 1 1 0 1 0 0 0 1 0 1 0 0 1 2 0 2 0 0 0 0 0 0 10 0 1129.5226 A0A0D9SF70;G5E9L0;Q8N6H7;H0YDN9;E9PMU9 A0A0D9SF70 294 303 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 2 0.0058301 78.513 By matching By MS/MS 1 1 1032700 505740 526970 141 233 152 358;359 310 310 340 1 AISTGSLASSTLNK VRGFNMGRAISTGSLA LASSTLNKLAVRPLSV R A I N K L 2 0 1 0 0 0 0 1 0 1 2 1 0 0 0 4 2 0 0 0 0 0 14 0 1348.7198 Q12923 Q12923 906 919 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 3.9267E-06 103.13 By MS/MS By MS/MS 1 1 7358100 3101200 4256900 142 1483 153 360;361 311;312 312 2017 2 AISTPETPLTK PSKGSQKRAISTPETP TPETPLTKRSVSTRSP R A I T K R 1 0 0 0 0 0 1 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 11 0 1156.634 E9PIQ6;Q14181 E9PIQ6 84 94 POLA2 DNA polymerase alpha subunit B yes no 2 0.0038431 98.156 By MS/MS By matching 1 1 2896600 1363800 1532800 143 641 154 362;363 313 313 3442;3443 1 AISTPETPLTKR PSKGSQKRAISTPETP PETPLTKRSVSTRSPH R A I K R S 1 1 0 0 0 0 1 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 12 1 1312.7351 E9PIQ6;Q14181 E9PIQ6 84 95 POLA2 DNA polymerase alpha subunit B yes no 2 2.0956E-14 107.53 By MS/MS By matching 1 1 3833900 2273800 1560000 144 641 155 364;365 314 314 3442;3443 0 AITPPHPASQANIIFDITEGNLR PEEIIFLRAITPPHPA DITEGNLRDSFDIIKR R A I L R D 3 1 2 1 0 1 1 1 1 4 1 0 0 1 3 1 2 0 0 0 0 0 23 0 2474.2918 P23142 P23142 620 642 FBLN1 Fibulin-1 yes yes 3 0.0081497 50.776 By matching By MS/MS 1 1 2284600 1145100 1139500 145 1306 156 366;367 315 315 1 AITPPQQPYK PPDSPEPKAITPPQQP TPPQQPYKKRPKICCP K A I Y K K 1 0 0 0 0 2 0 0 0 1 0 1 0 0 3 0 1 0 1 0 0 0 10 0 1141.6132 J3QSD7;Q9NYV4 J3QSD7 689 698 CDK12 Cyclin-dependent kinase 12 yes no 2 0.0010324 77.288 By MS/MS By MS/MS 1 1 4987600 4987600 0 146 1030 157 368;369 316;317 317 3567 2 AITSLLGGGSPK ASTNARNKAITSLLGG LLGGGSPKNNTAAETE K A I P K N 1 0 0 0 0 0 0 3 0 1 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1099.6237 Q6KC79 Q6KC79 2649 2660 NIPBL Nipped-B-like protein yes yes 2 0.0013495 89.26 By MS/MS By MS/MS 1 1 22431000 10992000 11439000 147 1670 158 370;371 318;319 319 2334 2 AIVAIENPADVSVISSR EKLLLAARAIVAIENP DVSVISSRNTGQRAVL R A I S R N 3 1 1 1 0 0 1 0 0 3 0 0 0 0 1 3 0 0 0 3 0 0 17 0 1739.9418 F8WD59;C9J9K3;A0A0C4DG17;P08865 F8WD59 64 80 RPSA 40S ribosomal protein SA yes no 2 0.0024141 73.848 By MS/MS 1 227240 227240 0 148 203 159 372 320 320 1 AIYSIVLK EDIGSETRAIYSIVLK AIYSIVLKLPGHSTIL R A I L K L 1 0 0 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 1 1 0 0 8 0 905.5586 P20309 P20309 363 370 CHRM3 Muscarinic acetylcholine receptor M3 yes yes 2 0.012423 62.659 By MS/MS By matching 1 1 462110 182580 279530 149 1299 160 373;374 321 321 4275 1 AIYSSFKDDVDLK STATRVMKAIYSSFKD FKDDVDLKQDLRCDTI K A I L K Q 1 0 0 3 0 0 0 0 0 1 1 2 0 1 0 2 0 0 1 1 0 0 13 1 1499.7508 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 384 396 KIRREL Kin of IRRE-like protein 1 yes no 2 0.0066691 66.962 By MS/MS 1 736830 0 736830 150 375 161 375 322 322 4086 1 AKADSPVNGLPK RRLEGAKKAKADSPVN SPVNGLPKGRESRSRS K A K P K G 2 0 1 1 0 0 0 1 0 0 1 2 0 0 2 1 0 0 0 1 0 0 12 1 1195.6561 A0A0A0MSF3;Q96S94 A0A0A0MSF3 192 203 CCNL2 Cyclin-L2 yes no 2 0.015597 67.019 By MS/MS By MS/MS 1 1 2199300 1112400 1086900 151 159 162 376;377 323;324 324 216 2 AKEVELVSE KKKKKKKKAKEVELVS KEVELVSE________ K A K S E - 1 0 0 0 0 0 3 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 1 1002.5233 O60832 O60832 506 514 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 0.018887 84.31 By matching By MS/MS 1 1 13983000 6987800 6994900 152 1148 163 378;379 325 325 1529 1 AKGPSPPGAK GSHRAGERAKGPSPPG GPSPPGAKRRRLSESS R A K A K R 2 0 0 0 0 0 0 2 0 0 0 2 0 0 3 1 0 0 0 0 0 0 10 1 908.50797 Q96S55 Q96S55 61 70 WRNIP1 ATPase WRNIP1 yes yes 2 0.0098412 83.877 By MS/MS By MS/MS 1 1 6358900 3086700 3272200 153 1928 164 380;381 326;327 327 2721 2 AKLGQNFSMEIQK FKHMVIVKAKLGQNFS NFSMEIQKFKAESEDY K A K Q K F 1 0 1 0 0 2 1 1 0 1 1 2 1 1 0 1 0 0 0 0 0 0 13 1 1492.7708 Q8IYW2 Q8IYW2 1159 1171 CFAP46 Cilia- and flagella-associated protein 46 yes yes 3 0.015838 42.789 By MS/MS 1 0 0 0 154 1765 165 382 328 328 248 1 AKLSAPLAGMGNAK ASEDGRVRAKLSAPLA LAGMGNAKADSRGRSR R A K A K A 4 0 1 0 0 0 0 2 0 0 2 2 1 0 1 1 0 0 0 0 0 0 14 1 1327.7282 E3W994;J3KR49;A0A0U1RQI6;E7ERI8;E7EW49;O75122 E3W994 427 440 CLASP2 CLIP-associating protein 2 yes no 2 0.00044488 75.02 By MS/MS By MS/MS 1 1 2452800 1222300 1230500 155 263 166 383;384 329;330 330 40 378 2 AKPAMPQDSVPSPR DEVAPAKKAKPAMPQD QDSVPSPRSLQGKSTT K A K P R S 2 1 0 1 0 1 0 0 0 0 0 1 1 0 4 2 0 0 0 1 0 0 14 1 1479.7504 P53396 P53396 470 483 ACLY ATP-citrate synthase yes yes 2;3 3.0119E-09 111.09 By MS/MS By MS/MS 3 4 23644000 11875000 11769000 156 1404 167;168 385;386;387;388;389;390;391 331;332;333;334;335;336;337;338 334 187 1894;1895 8 AKPPADPAAAASPCR DAAKGKVKAKPPADPA AAAASPCRAAAGGQGS K A K C R A 6 1 0 1 1 0 0 0 0 0 0 1 0 0 4 1 0 0 0 0 0 0 15 1 1478.73 Q9GZT9 Q9GZT9 114 128 EGLN1 Egl nine homolog 1 yes yes 2 0.00063316 78.249 By MS/MS By MS/MS 1 1 10730000 4753600 5976900 157 1987 169 392;393 339;340 340 2836 2 AKSEDSDVELSD EVHEELAKAKSEDSDV DSDVELSD________ K A K S D - 1 0 0 3 0 0 2 0 0 0 1 1 0 0 0 3 0 0 0 1 0 0 12 1 1293.5572 Q5VZL5;H7C1I7 Q5VZL5 1537 1548 ZMYM4 Zinc finger MYM-type protein 4 no no 2 3.5753E-15 101.61 By MS/MS By MS/MS 1 2 2176800 2176800 0 158 1658;956 170 394;395;396 341;342;343 342 1281;1282 2 AKSLDGVTNDR KSQPNIPKAKSLDGVT LDGVTNDRTASQGQWG K A K D R T 1 1 1 2 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 11 1 1174.5942 E9PRL8;E9PQ71;E9PIP9;E9PJ54;E9PM00;Q9UBM7 E9PRL8 12 22 DHCR7 7-dehydrocholesterol reductase yes no 2 0.017819 67.118 By MS/MS By matching 1 1 9979900 4383700 5596300 159 640 171 397;398 344 344 870 1 AKTPVTLK KREPLKGRAKTPVTLK AKTPVTLKQRRVEHNQ R A K L K Q 1 0 0 0 0 0 0 0 0 0 1 2 0 0 1 0 2 0 0 1 0 0 8 1 856.5382 G5E972;P42167;H0YJH7 G5E972 206 213 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2 1.0766E-07 141.89 By MS/MS By MS/MS 1 1 61131000 33982000 27149000 160 808 172 399;400 345;346 345 3500 2 AKTQTPPVSPAPQPTEER RKLEEQARAKTQTPPV APQPTEERLPSSPVYE R A K E R L 2 1 0 0 0 2 2 0 0 0 0 1 0 0 5 1 3 0 0 1 0 0 18 1 1932.9905 Q14247;H0YEV2;H0YCD9 Q14247 397 414 CTTN Src substrate cortactin yes no 3 0.021963 55.588 By matching By MS/MS 1 1 12943000 6995800 5947400 161 1519 173 401;402 347 347 2082;3749;3750 1 AKTVDLDPGTLYVHSV NQPSRKSRAKTVDLDP GTLYVHSV________ R A K S V - 1 0 0 2 0 0 0 1 1 0 2 1 0 0 1 1 2 0 1 3 0 0 16 1 1713.8938 Q8WY07 Q8WY07 604 619 SLC7A3 Cationic amino acid transporter 3 yes yes 2 0.0037807 64.121 By MS/MS By matching 1 1 2695400 1093700 1601800 162 1842 174 403;404 348 348 3870;4402 1 AKVPAQANGTPTTK RKKRNRTKAKVPAQAN ANGTPTTKSPAPGAPT K A K T K S 3 0 1 0 0 1 0 1 0 0 0 2 0 0 2 0 3 0 0 1 0 0 14 1 1382.7518 Q9BQG0;I3L1L3 Q9BQG0 1218 1231 MYBBP1A Myb-binding protein 1A yes no 2 0.00069894 82.925 By matching By MS/MS 2 2 2622000 1498400 1123700 163 1952 175 405;406;407;408 349;350 349 3909 0 AKYSDMSPVYR DSDYEQAKAKYSDMSP SDMSPVYRDKSGSGPT K A K Y R D 1 1 0 1 0 0 0 0 0 0 0 1 1 0 1 2 0 0 2 1 0 0 11 1 1315.6231 Q5H9B9 Q5H9B9 66 76 BMP2KL Putative BMP-2-inducible kinase-like protein yes yes 2 0.0019162 86.014 By MS/MS 1 266590000 0 266590000 164 1604 176 409 351 351 231 2223 1 ALAAAGYDVEK VSLAALKKALAAAGYD AAGYDVEKNNSRIKLG K A L E K N 4 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1106.5608 P16402;P16403;P22492;Q02539;P10412 P10412 65 75 HIST1H1D;HIST1H1C;HIST1H1T;HIST1H1A;HIST1H1E Histone H1.3;Histone H1.2;Histone H1t;Histone H1.1;Histone H1.4 no no 2 0.00281 86.136 By matching By MS/MS 1 1 5906600 2268600 3638000 165 1250;1277 177 410;411 352 352 1 ALAAAGYDVEKNNSR VSLAALKKALAAAGYD DVEKNNSRIKLGLKSL K A L S R I 4 1 2 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 15 1 1577.7798 P16402;P16403;P22492;Q02539;P10412 P10412 65 79 HIST1H1D;HIST1H1C;HIST1H1T;HIST1H1A;HIST1H1E Histone H1.3;Histone H1.2;Histone H1t;Histone H1.1;Histone H1.4 no no 3 0.00099079 90.759 By matching By MS/MS 1 1 3238900 1878600 1360300 166 1250;1277 178 412;413 353 353 1 ALCADEYR ELFLEKMRALCADEYR ALCADEYRARCRSYSI R A L Y R A 2 1 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 8 0 996.43348 O14654 O14654 330 337 IRS4 Insulin receptor substrate 4 yes yes 2 0.010076 74.255 By MS/MS 1 701920 0 701920 167 1094 179 414 354 354 4227 1 ALDIDSDEESEPK LYQNYKEKALDIDSDE SDEESEPKEQKSDEKI K A L P K E 1 0 0 3 0 0 3 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 13 0 1446.6362 Q96DR7 Q96DR7 387 399 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 0.013238 56.956 By MS/MS By MS/MS 1 1 2611900 999270 1612600 168 1884 180 415;416 355;356 356 2655;2656 2 ALDIDSDEESEPKEQK LYQNYKEKALDIDSDE ESEPKEQKSDEKIVIH K A L Q K S 1 0 0 3 0 1 4 0 0 1 1 2 0 0 1 2 0 0 0 0 0 0 16 1 1831.8323 Q96DR7 Q96DR7 387 402 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 0.014799 58.511 By MS/MS By matching 1 1 4001700 1687600 2314000 169 1884 181 417;418 357 357 2655;2656 1 ALDVSASDDEIAR AESFFQTKALDVSASD ASDDEIARLKKPDQAI K A L A R L 3 1 0 3 0 0 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1360.647 C9JLK2;H7C393;H7C1U0;C9JIF9;P13798 C9JLK2 80 92 APEH Acylamino-acid-releasing enzyme yes no 2 0.00062948 77.894 By MS/MS By matching 1 1 2180500 927220 1253200 170 465 182 419;420 358 358 654 1 ALEEGDGSVSGSSPR ERKKAELRALEEGDGS SVSGSSPRSDISQPAS R A L P R S 1 1 0 1 0 0 2 3 0 0 1 0 0 0 1 4 0 0 0 1 0 0 15 0 1446.6587 Q8N3X1 Q8N3X1 420 434 FNBP4 Formin-binding protein 4 yes yes 2 6.5218E-18 128.82 By MS/MS By MS/MS 1 1 4923900 2149900 2774000 171 1777 183 421;422 359;360 360 2497 2 ALEENNNFSK HEREVLQKALEENNNF EENNNFSKMAEEKLIL K A L S K M 1 0 3 0 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 10 0 1164.5411 E5RGX5;Q93045 E5RGX5 109 118 STMN2 Stathmin;Stathmin-2 yes no 2 0.021768 59.35 By MS/MS By matching 1 1 1603000 835710 767260 172 550 184 423;424 361 361 1 ALELDSNNEK AAIESCNKALELDSNN ELDSNNEKGLFRRGEA K A L E K G 1 0 2 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1131.5408 Q02790 Q02790 345 354 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 0.0051215 83.948 By MS/MS By MS/MS 1 2 1591700 511110 1080500 173 1455 185 425;426;427 362;363 362 2 ALENDFFNSPPR RTGISNMRALENDFFN DFFNSPPRKTVRFGGT R A L P R K 1 1 2 1 0 0 1 0 0 0 1 0 0 2 2 1 0 0 0 0 0 0 12 0 1405.6626 F5H148;H3BMT1;A6NIE6;Q9NYV6 F5H148 36 47 RRN3;RRN3P2 Putative RRN3-like protein RRN3P2;RNA polymerase I-specific transcription initiation factor RRN3 yes no 2 0.0082865 62.042 By MS/MS By matching 1 1 1102700 555320 547430 174 329 186 428;429 364 364 468 1 ALEVAEYLTPVLK VINTVKGKALEVAEYL EYLTPVLKESKFKETG K A L L K E 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 0 1 0 1 2 0 0 13 0 1444.8177 F8WDI0;Q9NT62 F8WDI0 12 24 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes no 2 5.5172E-22 141.89 By MS/MS By MS/MS 1 1 11440000 4864300 6575300 175 769 187 430;431 365;366 366 4169 2 ALGLSTDDAYEELR SLTDTVNKALGLSTDD DDAYEELRQKHEYELN K A L L R Q 2 1 0 2 0 0 2 1 0 0 3 0 0 0 0 1 1 0 1 0 0 0 14 0 1551.7417 A0A087X0F1;Q9UK61 A0A087X0F1 222 235 FAM208A Protein FAM208A yes no 2 0.0038952 59.542 By MS/MS By matching 1 1 886390 311560 574830 176 96 188 432;433 367 367 4017 1 ALIEMVVAR RPSRSPLRALIEMVVA LIEMVVAREPSASLGQ R A L A R E 2 1 0 0 0 0 1 0 0 1 1 0 1 0 0 0 0 0 0 2 0 0 9 0 1000.5739 K7EL86;Q9H665 K7EL86 143 151 IGFLR1 IGF-like family receptor 1 yes no 2 0.000726 98.418 By matching By MS/MS 1 1 1979600 1365300 614320 177 1043 189 434;435 368 368 119 0 ALILVGLER NLRQEGVRALILVGLE LILVGLERVVNLERLM R A L E R V 1 1 0 0 0 0 1 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 9 0 982.61752 E7ENL6;P12111 E7ENL6 1369 1377 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0018456 98.458 By MS/MS By MS/MS 1 1 4184700 2530000 1654700 178 567 190 436;437 369;370 370 2 ALIQTCLNSPDSPPRSDPTTDQR MITSETGKALIQTCLN SDPTTDQRMSATGFEE K A L Q R M 1 2 1 3 1 2 0 0 0 1 2 0 0 0 4 3 3 0 0 0 0 0 23 1 2568.2238 P11831 P11831 213 235 SRF Serum response factor yes yes 3 0.0064039 49.865 By MS/MS By matching 1 1 11597000 5940600 5656100 179 1261 191 438;439 371 371 1667 1 ALLIEQQSPK A L P K 1 0 0 0 0 2 1 0 0 1 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1125.6394 REV__Q9Y4D2 yes yes 2 0.0068489 72.547 By matching By MS/MS 1 2 1511100 452080 1059100 + 180 2217 192 440;441;442 372 372 3202 1 ALLLLCGEDD DTSGDYKKALLLLCGE LLLCGEDD________ K A L D D - 1 0 0 2 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 10 0 1117.5325 D6RBE9;D6RBL5;P08758 D6RBE9 211 220 ANXA5 Annexin;Annexin A5 yes no 2 0.0091823 71.296 By matching By MS/MS 1 1 867680 302960 564720 181 528 193 443;444 373 373 1 ALMSLSSLVK VWPATVPRALMSLSSL MSLSSLVKPETAACVG R A L V K P 1 0 0 0 0 0 0 0 0 0 3 1 1 0 0 3 0 0 0 1 0 0 10 0 1047.5998 A0A140T930;A2BF26;A0A140T9B3;A0A140T9U8 A0A140T930 355 364 HLA-C no no 2 0.02075 40.002 By MS/MS 1 0 0 0 182 279;283 194 445 374 374 44 395;396;397 1 ALMSNTYLCFLTTGPR PSSPSFSRALMSNTYL CFLTTGPRSSRENTQK R A L P R S 1 1 1 0 1 0 0 1 0 0 3 0 1 1 1 1 3 0 1 0 0 0 16 0 1843.8961 Q5U4N7 Q5U4N7 192 207 GDF5OS Protein GDF5OS, mitochondrial yes yes 3 0.021302 41.967 By MS/MS 1 666200 666200 0 183 1640 195 446 375 375 3805;3806;3807 0 ALPLPQSSTC NGGRKNERALPLPQSS PLPQSSTC________ R A L T C - 1 0 0 0 1 1 0 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 10 0 1072.5223 C9J5X1;P08069 C9J5X1 1357 1366 IGF1R Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain yes no 2 0.020157 70.908 By MS/MS 1 934770 0 934770 184 445 196 447 376 376 3365 1 ALPNNTSSSPQPK LPPGSTKRALPNNTSS TSSSPQPKKKPLDGEY R A L P K K 1 0 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 13 0 1339.6732 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 148 160 TP53 Cellular tumor antigen p53 yes no 2 1.0279E-21 142.39 By MS/MS By MS/MS 3 2 70851000 34994000 35857000 185 93 197;198 448;449;450;451;452 377;378;379;380;381;382;383 377 15 114;115;116;3240 7 ALPSLNTGSSSPR QTSCNPSRALPSLNTG NTGSSSPRGVEEPDVI R A L P R G 1 1 1 0 0 0 0 1 0 0 2 0 0 0 2 4 1 0 0 0 0 0 13 0 1285.6626 O14545 O14545 317 329 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 0.0012832 84.468 By MS/MS By MS/MS 1 1 59384000 28369000 31015000 186 1092 199 453;454 384;385 384 3592 2 ALPTSKPEGSLHSSPVGPSSSK PSDPRLARALPTSKPE PVGPSSSKGSGPPPTE R A L S K G 1 0 0 0 0 0 1 2 1 0 2 2 0 0 4 7 1 0 0 1 0 0 22 1 2149.1015 Q9UPT8;M0QY97 Q9UPT8 895 916 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 3 0.016397 43.164 By MS/MS By matching 1 1 5987600 2884200 3103300 187 2131 200 455;456 386 386 3060 1 ALRASESGI GTGHNQTRALRASESG LRASESGI________ R A L G I - 2 1 0 0 0 0 1 1 0 1 1 0 0 0 0 2 0 0 0 0 0 0 9 1 902.48214 P48960 P48960 827 835 CD97 CD97 antigen;CD97 antigen subunit alpha;CD97 antigen subunit beta yes yes 2 0.0040396 100.25 By MS/MS By matching 1 1 1792900 803480 989410 188 1376 201 457;458 387 387 1836 1 ALSAAVADSLTNSPR MLRAMKQKALSAAVAD DSLTNSPRDSPAVSLS K A L P R D 4 1 1 1 0 0 0 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 15 0 1471.7631 H7C3B5;Q14687 H7C3B5 99 113 GSE1 Genetic suppressor element 1 yes no 2 0.012589 53.861 By MS/MS 1 812700 812700 0 189 961 202 459 388 388 1291 1 ALSASHTDLAH NNCLADSRALSASHTD ASHTDLAH________ R A L A H - 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1121.5465 H0YG16;H0YJK1 H0YG16 258 268 KLC1 yes no 2;3 9.6755E-71 178.54 By MS/MS By MS/MS 2 2 34888000 19713000 15174000 190 884 203 460;461;462;463 389;390;391;392 392 1190;1191 4 ALSDREEEEEDDEEEEEEVEAAAQR AARSEDGRALSDREEE EVEAAAQRRLAKQISP R A L Q R R 4 2 0 3 0 1 12 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 25 1 2935.1963 Q8N3E9 Q8N3E9 494 518 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 yes yes 3 0.00014504 64.68 By MS/MS By MS/MS 1 1 8242900 3900600 4342300 191 1773 204 464;465 393;394 394 2491 2 ALSGVLEQDRVQSLK KNKFDVQKALSGVLEQ QDRVQSLKDKNEATVS K A L L K D 1 1 0 1 0 2 1 1 0 0 3 1 0 0 0 2 0 0 0 2 0 0 15 1 1641.905 E9PJ90;E9PN23;G5E991;E9PMN1;E9PLR4;Q9Y450 E9PJ90 51 65 HBS1L HBS1-like protein yes no 3 0.0087104 52.52 By MS/MS By MS/MS 1 1 999440 419730 579710 192 648 205 466;467 395;396 395 877;878 2 ALSPGLEESGLGLLAR YRLGARERALSPGLEE SGLGLLARFAASALPS R A L A R F 2 1 0 0 0 0 2 3 0 0 5 0 0 0 1 2 0 0 0 0 0 0 16 0 1581.8726 H9KVB4;O15417 H9KVB4 1855 1870 TNRC18 Trinucleotide repeat-containing gene 18 protein yes no 2 0.00332 63.128 By MS/MS By matching 1 1 2710500 1070300 1640100 193 978 206 468;469 397 397 1308 1 ALSPVIPLIPR GRWEQEDRALSPVIPL PVIPLIPRASIPVFPD R A L P R A 1 1 0 0 0 0 0 0 0 2 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1174.7438 O14686 O14686 4736 4746 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.0030694 81.625 By MS/MS By matching 1 1 6050700 3182300 2868400 194 1095 207 470;471 398 398 1457 1 ALSSGGSITSPPLSPALPK NFGPEWLRALSSGGSI PLSPALPKYKLADYRY R A L P K Y 2 0 0 0 0 0 0 2 0 1 3 1 0 0 4 5 1 0 0 0 0 0 19 0 1778.9778 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2 I1E4Y6 17 35 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 3.8378E-70 157.54 By MS/MS By MS/MS 3 5 46716000 20283000 26433000 195 979 208;209;210 472;473;474;475;476;477;478;479 399;400;401;402;403;404;405;406 403 1309;1310;1311;1312;3553 8 ALSSLHGDDQDSEDEVLTIPEVK HITTKSVKALSSLHGD VLTIPEVKVHSGRGAG K A L V K V 1 0 0 4 0 1 3 1 1 1 3 1 0 0 1 3 1 0 0 2 0 0 23 0 2496.1868 P11717 P11717 2398 2420 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 3 0.00014796 69.052 By MS/MS 1 11207000 0 11207000 196 1260 211 480 407 407 1664 1 ALSSQLEEAR AATASQTRALSSQLEE SSQLEEARAAQRELEA R A L A R A 2 1 0 0 0 1 2 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 10 0 1102.5619 Q6DT37 Q6DT37 542 551 CDC42BPG Serine/threonine-protein kinase MRCK gamma yes yes 2 0.019178 51.436 By matching By MS/MS 1 1 16765000 9022100 7742700 197 1665 212 481;482 408 408 2326;2327 1 ALTDDSDENEEEDAFTDQK MKLPPPYKALTDDSDE EDAFTDQKIRQRYADL K A L Q K I 2 0 1 5 0 1 4 0 0 0 1 1 0 1 0 1 2 0 0 0 0 0 19 0 2170.8662 Q8NI35;A0A0U1RRD7;A0A0U1RQW4 Q8NI35 1207 1225 INADL InaD-like protein yes no 2 6.9901E-06 95.197 By MS/MS By MS/MS 1 1 6903300 3234700 3668600 198 1810 213 483;484 409;410 410 2550 2 ALVATPGKK KKGATPGKALVATPGK LVATPGKKGAAIPAKG K A L K K G 2 0 0 0 0 0 0 1 0 0 1 2 0 0 1 0 1 0 0 1 0 0 9 1 883.5491 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 117 125 NCL Nucleolin yes no 2 0.0033911 95.483 By MS/MS By MS/MS 1 1 27588000 13246000 14342000 199 1294 214 485;486 411;412 411 3663 2 ALVEFESNPEETREPGSPPSVQR TSVSRTRRALVEFESN GSPPSVQRAGLGSPER R A L Q R A 1 2 1 0 0 1 5 1 0 0 1 0 0 1 4 3 1 0 0 2 0 0 23 1 2554.23 Q9H6F5;H0YG79 Q9H6F5 31 53 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 0.00016078 70.944 By MS/MS By MS/MS 1 1 61713000 29602000 32111000 200 2009 215 487;488 413;414;415;416 414 2874;3928 4 ALVLIAFAQYLQQCPFEDHVK DLGEENFKALVLIAFA CPFEDHVKLVNEVTEF K A L V K L 3 0 0 1 1 3 1 0 1 1 3 1 0 2 1 0 0 0 1 2 0 0 21 0 2489.2777 A0A0C4DGB6;CON__P02768-1;P02768;A0A087WWT3;H7C013 A0A0C4DGB6 45 65 ALB Serum albumin yes no 3 3.6605E-71 150.45 By MS/MS By MS/MS 1 1 26643000 15536000 11107000 + 201 209 216 489;490 417;418 417 2 ALVVPEPEPDSDSNQER GDLLTERKALVVPEPE DSDSNQERKDDRERGE K A L E R K 1 1 1 2 0 1 3 0 0 0 1 0 0 0 3 2 0 0 0 2 0 0 17 0 1880.8752 Q5VTR2;C9J0A5;C9JXC9 Q5VTR2 126 142 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 2 0.0065334 55.755 By matching By MS/MS 1 1 24252000 10725000 13527000 202 1645 217 491;492 419 419 2299;2300 1 ALYSTAMESIQGEAR TRRPAPQKALYSTAME ESIQGEARRGGTMETD K A L A R R 3 1 0 0 0 1 2 1 0 1 1 0 1 0 0 2 1 0 1 0 0 0 15 0 1625.7719 A6PW57;Q99755;A2A3N6 A6PW57 346 360 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 2 2.927E-07 100.93 By MS/MS By MS/MS 1 1 1999400 802990 1196400 203 334 218 493;494 420;421 421 4065 2 AMGIMNSFVNDIFER PDTGISSKAMGIMNSF FVNDIFERIAGEASRL K A M E R I 1 1 2 1 0 0 1 1 0 2 0 0 2 2 0 1 0 0 0 1 0 0 15 0 1742.812 U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899 U3KQK0 59 73 HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J yes no 2 1.0048E-08 88.187 By MS/MS 1 0 0 0 204 1146 219 495 422 422 138 1 AMLLQGTESLNR MNRLQSQRAMLLQGTE QGTESLNRATQSIERS R A M N R A 1 1 1 0 0 1 1 1 0 0 3 0 1 0 0 1 1 0 0 0 0 0 12 0 1331.6867 H0YJL5;H0YJJ5;Q9UEU0 H0YJL5 47 58 VTI1B Vesicle transport through interaction with t-SNAREs homolog 1B yes no 3 0.01297 46.592 By MS/MS 1 0 0 0 205 889 220 496 423 423 130 3528 1 AMSEVTSLHEDDWR PPSGRVERAMSEVTSL SLHEDDWRSRPSRGPA R A M W R S 1 1 0 2 0 0 2 0 1 0 1 0 1 0 0 2 1 1 0 1 0 0 14 0 1674.7308 S4R3V8;Q86X29 S4R3V8 382 395 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.019002 52.101 By matching By MS/MS 1 1 2402900 1142900 1260000 206 1738 221 497;498 424 424 2444 1 AMSLNTLNVDAPR AGAAGMKRAMSLNTLN TLNVDAPRAPGTQFPS R A M P R A 2 1 2 1 0 0 0 0 0 0 2 0 1 0 1 1 1 0 0 1 0 0 13 0 1400.7082 Q6P597 Q6P597 464 476 KLC3 Kinesin light chain 3 yes yes 2 1.233E-06 110.55 By MS/MS By MS/MS 2 1 5200700 3367000 1833700 207 1679 222;223 499;500;501 425;426;427 427 246 2349 3 AMSTTSISSPQPGK EIFKQKERAMSTTSIS ISSPQPGKLRSPFLQK R A M G K L 1 0 0 0 0 1 0 1 0 1 0 1 1 0 2 4 2 0 0 0 0 0 14 0 1390.6762 H0Y5J4;B4DDD6;Q9UJU6 H0Y5J4 196 209 DBNL Drebrin-like protein yes no 2 9.9089E-37 147.39 By MS/MS By MS/MS 3 4 36416000 16269000 20147000 208 369 224;225;226 502;503;504;505;506;507;508 428;429;430;431;432;433 431 50 532;533;534;3338 6 ANMHISESQQEFFRMLDEK PGLVHQPRANMHISES FFRMLDEKIEKGRDYC R A N E K I 1 1 1 1 0 2 3 0 1 1 1 1 2 2 0 2 0 0 0 0 0 0 19 1 2339.0675 Q9H246 Q9H246 88 106 C1orf21 Uncharacterized protein C1orf21 yes yes 3 0.017514 40.844 By MS/MS 1 0 0 0 209 1995 227 509 434 434 287 286 2851 1 ANQQFLVYCEIDGSGNGWTVFQK LYFIKPLKANQQFLVY NGWTVFQK________ K A N Q K - 1 0 2 1 1 3 1 3 0 1 1 1 0 2 0 1 1 1 1 2 0 0 23 0 2660.2329 C9JPQ9;C9JU00;C9JEU5;C9JC84;P02679 C9JPQ9 97 119 FGG Fibrinogen gamma chain yes no 2;3 1.3588E-97 153.83 By MS/MS By MS/MS 4 5 148010000 74617000 73390000 210 457 228;229 510;511;512;513;514;515;516;517;518 435;436;437;438;439 435 65 5 ANQYKENHNR GIEQQVLRANQYKENH QYKENHNRT_______ R A N N R T 1 1 3 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 10 1 1272.5959 J3QT95;J3QT73;A0A087X1P5;J3KQ34;J3KQ41;Q9H9Q2 J3QT95 140 149 COPS7B COP9 signalosome complex subunit 7b yes no 3 0.016502 44.309 By MS/MS 1 0 0 0 211 110 230 519 440 440 19 1 ANSDIISLNFR LGMENFARANSDIISL DIISLNFRSASMISSD R A N F R S 1 1 2 1 0 0 0 0 0 2 1 0 0 1 0 2 0 0 0 0 0 0 11 0 1248.6463 Q8TC76 Q8TC76 299 309 FAM110B Protein FAM110B yes yes 2 5.4399E-07 130.15 By MS/MS By MS/MS 1 1 3131200 1602300 1529000 212 1818 231 520;521 441;442 441 2562 2 ANSDTDLVTSESR PENMTLQRANSDTDLV DLVTSESRSSLTASMY R A N S R S 1 1 1 2 0 0 1 0 0 0 1 0 0 0 0 3 2 0 0 1 0 0 13 0 1393.6321 C9JHL2;C9JPI9;Q9P2P5 C9JHL2 46 58 HECW2 E3 ubiquitin-protein ligase HECW2 yes no 2 0.00059746 85.976 By MS/MS By MS/MS 1 1 4633500 2227400 2406100 213 463 232 522;523 443;444 443 652 2 ANSGGVDLDSSGEFASIEK RGMRSRPRANSGGVDL GEFASIEKMLATTDTN R A N E K M 2 0 1 2 0 0 2 3 0 1 1 1 0 1 0 4 0 0 0 1 0 0 19 0 1881.8592 A0A087X055;Q92766 A0A087X055 234 252 RREB1 Ras-responsive element-binding protein 1 yes no 2 8.0691E-58 147.28 By MS/MS 1 4503300 0 4503300 214 95 233 524 445 445 120 1 ANSPEKPPEAGAAHKPR ASRTQVQKANSPEKPP AGAAHKPRARLAALKR K A N P R A 4 1 1 0 0 0 2 1 1 0 0 2 0 0 4 1 0 0 0 0 0 0 17 2 1755.9016 F8WDB4;Q9UFC0 F8WDB4 58 74 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 0.0024385 75.143 By MS/MS By MS/MS 1 1 25370000 15938000 9431900 215 768 234 525;526 446;447 447 1024 2 ANVSSPHR XIHEQWEKANVSSPHR ANVSSPHREFPPATAR K A N H R E 1 1 1 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 0 1 0 0 8 0 866.43586 H0Y555;Q5QPM9;Q5QPM7;Q92530 H0Y555 9 16 PSMF1 Proteasome inhibitor PI31 subunit yes no 2 0.0096804 104.05 By MS/MS By MS/MS 1 1 2689700 1504300 1185400 216 831 235 527;528 448;449 449 1119;1120 2 ANVSSPHREFPPATAR XIHEQWEKANVSSPHR EFPPATAREVDPLRIP K A N A R E 3 2 1 0 0 0 1 0 1 0 0 0 0 1 3 2 1 0 0 1 0 0 16 1 1735.8754 H0Y555;Q5QPM9;Q5QPM7;Q92530 H0Y555 9 24 PSMF1 Proteasome inhibitor PI31 subunit yes no 3 0.0038292 57.414 By MS/MS By MS/MS 1 2 4664100 2381500 2282500 217 831 236 529;530;531 450;451 450 1119;1120 1 ANYLEDR VSARQKPRANYLEDRK RANYLEDRKNGSKLIV R A N D R K 1 1 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 7 0 879.40865 O00186 O00186 519 525 STXBP3 Syntaxin-binding protein 3 yes yes 2 0.0044268 99.375 By MS/MS By MS/MS 2 1 1099400 484780 614650 218 1078 237 532;533;534 452;453 452 4223 2 APAGPSLEETSVSSPK SPPDWWKKAPAGPSLE ETSVSSPKGSSEPCWL K A P P K G 2 0 0 0 0 0 2 1 0 0 1 1 0 0 3 4 1 0 0 1 0 0 16 0 1555.773 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 477 492 HEATR6 HEAT repeat-containing protein 6 yes no 2 0.00066543 88.507 By matching By MS/MS 1 1 4362700 1896700 2465900 219 78 238 535;536 454 454 96;97;98 1 APIDTSDVEEK ITAFKMEKAPIDTSDV DTSDVEEKAEEIIAEA K A P E K A 1 0 0 2 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1202.5667 D6RIY6;Q06265 D6RIY6 285 295 EXOSC9 Exosome complex component RRP45 yes no 2 0.018386 68.515 By matching By MS/MS 1 1 2256400 1002600 1253700 220 542 239 537;538 455 455 723;3398 1 APKEEADYEDDFLEYDQEHIR EEESLMWRAPKEEADY EYDQEHIRFIDNMLMG R A P I R F 2 1 0 4 0 1 5 0 1 1 1 1 0 1 1 0 0 0 2 0 0 0 21 1 2611.1351 H0YJZ6;Q9UPY3 H0YJZ6 110 130 DICER1 Endoribonuclease Dicer yes no 3 0.0012848 68.134 By MS/MS 1 1769300 0 1769300 221 890 240 539 456 456 4191 1 APLKPYPVSPSDK EFIFTTIKAPLKPYPV YPVSPSDKVLIQEKTQ K A P D K V 1 0 0 1 0 0 0 0 0 0 1 2 0 0 4 2 0 0 1 1 0 0 13 1 1397.7555 Q5TCC6;J3KR24;A0A0A0MSX9;P41252 Q5TCC6 92 104 IARS Isoleucine--tRNA ligase, cytoplasmic yes no 3 0.0002143 81.676 By MS/MS 1 504340 0 504340 222 169 241 540 457 457 238 1 APLSPGRK AGEPGPERAPLSPGRK APLSPGRKGAAGRKGP R A P R K G 1 1 0 0 0 0 0 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 8 1 824.48684 A0A1B0GW05 A0A1B0GW05 43 50 yes yes 2 0.014126 63.816 By MS/MS 1 0 0 0 223 303 242 541 458 458 433 1 APPTLQAETATKPQATSAPSPAPK MVPATDTKAPPTLQAE SAPSPAPKQSFLFGTQ K A P P K Q 6 0 0 0 0 2 1 0 0 0 1 2 0 0 6 2 4 0 0 0 0 0 24 1 2359.2383 A0A087WY75;A0A075B7F8;A8CG34;Q96HA1 A0A087WY75 413 436 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 yes no 3 0.0017487 57.826 By MS/MS By matching 1 1 8482400 3233000 5249400 224 17 243 542;543 459 459 17 1 APQTSSSPPPVR HSPSPRPRAPQTSSSP SSSPPPVRRGASSSPQ R A P V R R 1 1 0 0 0 1 0 0 0 0 0 0 0 0 4 3 1 0 0 1 0 0 12 0 1222.6306 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 699 710 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 2.1484E-233 219.89 By MS/MS By MS/MS 2 2 47701000 22097000 25603000 225 346 244;245 544;545;546;547 460;461;462;463 461 488;489 2 APSASVDSSLYNLPR IYDSPPSRAPSASVDS SSLYNLPRSYSHDVLP R A P P R S 2 1 1 1 0 0 0 0 0 0 2 0 0 0 2 4 0 0 1 1 0 0 15 0 1575.7893 B7Z3B9;Q13480 B7Z3B9 146 160 GAB1 GRB2-associated-binding protein 1 yes no 2 0.00011664 81.525 By matching By MS/MS 1 1 2948700 1567500 1381200 226 406 246 548;549 464 464 558 1 APSDSSLGTPSDGRPELR DFSQPMNRAPSDSSLG SDGRPELRGPGRSRTK R A P L R G 1 2 0 2 0 0 1 2 0 0 2 0 0 0 3 4 1 0 0 0 0 0 18 1 1840.8915 M0R2H7;M0R0F9;W4VSQ9;Q15642 M0R2H7 294 311 TRIP10 Cdc42-interacting protein 4 yes no 3 0.0024918 61.732 By MS/MS By MS/MS 1 1 3657500 1658500 1998900 227 1069 247 550;551 465;466 465 1407 2 APSLTDLVK SIPPTLTKAPSLTDLV PSLTDLVKSGPGKAKE K A P V K S 1 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 1 0 0 1 0 0 9 0 942.5386 O15014 O15014 1053 1061 ZNF609 Zinc finger protein 609 yes yes 2 0.00997 73.841 By MS/MS 1 634010 634010 0 228 1099 248 552 467 467 1465 1 APSPTKPLR AAQRSGPRAPSPTKPL PSPTKPLRRSQRKSGS R A P L R R 1 1 0 0 0 0 0 0 0 0 1 1 0 0 3 1 1 0 0 0 0 0 9 1 965.56581 B5MBX0;Q96FF9 B5MBX0 19 27 CDCA5 Sororin yes no 2 0.0072723 90.149 By MS/MS By MS/MS 1 1 8879500 4336400 4543100 229 389 249 553;554 468;469 469 550 2 APSRQDVYGPQPQVR RPSMEGYRAPSRQDVY YGPQPQVRVGGSSVDL R A P V R V 1 2 0 1 0 3 0 1 0 0 0 0 0 0 3 1 0 0 1 2 0 0 15 1 1696.8645 C9JZR2;O60716;E9PRE2 C9JZR2 250 264 CTNND1 Catenin delta-1 yes no 3 0.00029348 72.209 By MS/MS By MS/MS 1 1 4255200 2781000 1474200 230 495 250 555;556 470;471 470 4120 0 APSSPVAKPGPVK AKVPASKRAPSSPVAK VAKPGPVKTLTRKKNK R A P V K T 2 0 0 0 0 0 0 1 0 0 0 2 0 0 4 2 0 0 0 2 0 0 13 1 1233.7081 A0A0C4DG31;Q9GZR2 A0A0C4DG31 12 24 REXO4 RNA exonuclease 4 yes no 2;3 0.012719 68.033 By MS/MS By MS/MS 2 2 8645400 4177800 4467600 231 204 251 557;558;559;560 472;473 473 294;295 2 APTKEFYA PSSAAYQKAPTKEFYA APTKEFYA________ K A P Y A - 2 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 8 1 925.45453 E7ESK6;E9PBI9;P34741 E7ESK6 158 165 SDC2 Syndecan;Syndecan-2 yes no 2 0.018211 80.229 By matching By MS/MS 1 1 2915600 1531700 1383800 232 586 252 561;562 474 474 4145 1 APVHFVEPLSPTGVAGHR NSQDHKVKAPVHFVEP PTGVAGHRKAPRLGQG K A P H R K 2 1 0 0 0 0 1 2 2 0 1 0 0 1 3 1 1 0 0 3 0 0 18 0 1869.985 Q5T5Y3 Q5T5Y3 1071 1088 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 3 0.0047495 53.625 By MS/MS By MS/MS 1 1 3650500 1631300 2019200 233 1627 253 563;564 475;476 476 2265 2 APVPSTCSSTFPEELSPPSHQAK DLENFLQKAPVPSTCS SPPSHQAKREIRFLEL K A P A K R 2 0 0 0 1 1 2 0 1 0 1 1 0 1 5 5 2 0 0 1 0 0 23 0 2453.1533 A0A087WY61;Q14980;F5H6Y5;F5H4J1;F5H0Z7;F5H763 A0A087WY61 154 176 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.006131 49.188 By matching By MS/MS 1 1 7775700 2799200 4976500 234 79 254 565;566 477 477 99 1 APVQPQQSPAAAPGGTDEKPSGK MEEGGRDKAPVQPQQS TDEKPSGKERRDAGDK K A P G K E 4 0 0 1 0 3 1 3 0 0 0 2 0 0 5 2 1 0 0 1 0 0 23 1 2217.1026 F8WBS8;C9JPC0;Q13200 F8WBS8 9 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 3 0.0030838 55.705 By matching By MS/MS 1 1 7500500 4412700 3087800 235 473 255 567;568 478 478 661 1 AQAVSEEEEEEEGK SKEAPKRKAQAVSEEE EEEEEEGKSSSPKKKI K A Q G K S 2 0 0 0 0 1 7 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 14 0 1562.6584 G3V529;Q9GZR7 G3V529 35 48 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 0.001613 72.615 By MS/MS By MS/MS 1 1 1553500 540690 1012800 236 801 256 569;570 479;480 479 1061 2 AQAVSEEEEEEEGKSSSPK SKEAPKRKAQAVSEEE EGKSSSPKKKIKLKKS K A Q P K K 2 0 0 0 0 1 7 1 0 0 0 2 0 0 1 4 0 0 0 1 0 0 19 1 2048.9022 G3V529;Q9GZR7 G3V529 35 53 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 0.0012737 74.793 By MS/MS By MS/MS 1 1 7604200 4261800 3342400 237 801 257 571;572 481;482 482 1061 2 AQGEPVAGHESPKIPYEK QLRDRLCRAQGEPVAG SPKIPYEKQQLPKGRP R A Q E K Q 2 0 0 0 0 1 3 2 1 1 0 2 0 0 3 1 0 0 1 1 0 0 18 1 1935.969 H0YAB3;D6RHZ5;H7BXG7;D6REX3;O94979 H0YAB3 406 423 SEC31A Protein transport protein Sec31A yes no 3 0.0012771 72.433 By matching By MS/MS 1 1 37017000 22065000 14952000 238 534 258 573;574 483;484 484 716 2 AQGVRSPLLR KLNLQDGRAQGVRSPL GVRSPLLRQSSSEQCS R A Q L R Q 1 2 0 0 0 1 0 1 0 0 2 0 0 0 1 1 0 0 0 1 0 0 10 1 1095.6513 O60343;Q5JU47 O60343 661 670 TBC1D4 TBC1 domain family member 4 yes no 2;3 0.0047205 70.728 By matching By MS/MS 2 2 15757000 7546000 8211300 239 1138 259 575;576;577;578 485;486 486 1513 2 AQIPEGDYLSYR GDPGSTRRAQIPEGDY EGDYLSYREFHSAGRT R A Q Y R E 1 1 0 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 0 12 0 1410.6779 Q96RT1 Q96RT1 1097 1108 ERBB2IP Protein LAP2 yes yes 2 0.0025988 68.893 By MS/MS 1 3084900 3084900 0 240 1927 260 579 487 487 4425 1 AQISSPNLR VARIAPQRAQISSPNL QISSPNLRTRPPPRRE R A Q L R T 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 9 0 984.53524 H0Y507;Q5TCZ1 H0Y507 344 352 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.011987 70.1 By MS/MS By MS/MS 1 1 1862200 847980 1014200 241 829 261 580;581 488;489 489 1111;1112 2 AQKLPDLSPVENK QPRAGPIKAQKLPDLS DLSPVENKEHKPGPIG K A Q N K E 1 0 1 1 0 1 1 0 0 0 2 2 0 0 2 1 0 0 0 1 0 0 13 1 1437.7827 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2100 2112 PRRC2C Protein PRRC2C yes no 2;3 0.0014036 85.271 By MS/MS By matching 2 2 7994100 4219200 3774900 242 570 262 582;583;584;585 490;491 491 757 2 AQLEPVASPAK ELQLVTYKAQLEPVAS EPVASPAKKPKVQSGS K A Q A K K 3 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 11 0 1109.6081 Q15149 Q15149 1428 1438 PLEC Plectin yes yes 2 0.007698 66.023 By MS/MS By matching 1 1 1867300 878970 988350 243 1546 263 586;587 492 492 2137 1 AQLSPGIYDDTSAR STLHEAPKAQLSPGIY IYDDTSARRTPVSYQN K A Q A R R 2 1 0 2 0 1 0 1 0 1 1 0 0 0 1 2 1 0 1 0 0 0 14 0 1492.7158 A0A088AWL3;O75376;E7EVK1 A0A088AWL3 1376 1389 NCOR1 Nuclear receptor corepressor 1 yes no 2 5.402E-09 110.35 By MS/MS By MS/MS 1 1 17517000 9892300 7624700 244 119 264 588;589 493;494 494 158 2 AQMKAQEAEHITSVYLQLK NLENRLEKAQMKAQEA TSVYLQLKAYLMDESL K A Q L K A 3 0 0 0 0 3 2 0 1 1 2 2 1 0 0 1 1 0 1 1 0 0 19 1 2187.1358 K7EPK8;A5D8V7 K7EPK8 25 43 CCDC151 Coiled-coil domain-containing protein 151 yes no 2 0.014582 40.113 By matching By MS/MS 1 1 2603000 1186600 1416400 245 325 265 590;591 495 495 1 AQQELVPPQQQASPPQLPK QGQPGLERAQQELVPP ASPPQLPKAMFSELSN R A Q P K A 2 0 0 0 0 6 1 0 0 0 2 1 0 0 5 1 0 0 0 1 0 0 19 0 2083.1062 F1T0I1;J3KNL6;O15027 F1T0I1 1057 1075 SEC16A Protein transport protein Sec16A yes no 3 0.0034825 57.173 By MS/MS By MS/MS 1 1 5125300 2495000 2630300 246 685 266 592;593 496;497;498;499 498 920 4 AQRLQTELDVSEQVQR LMFEEKNKAQRLQTEL DVSEQVQRDFVKLSQT K A Q Q R D 1 2 0 1 0 4 2 0 0 0 2 0 0 0 0 1 1 0 0 2 0 0 16 1 1898.981 Q15276;K7ENJ9 Q15276 804 819 RABEP1 Rab GTPase-binding effector protein 1 yes no 3 0.013727 44.132 By MS/MS By matching 1 1 2524500 1452800 1071700 247 1549 267 594;595 500 500 3766 1 AQSLPKTSASQAR EKKKELMKAQSLPKTS KTSASQARKAMIEKLE K A Q A R K 3 1 0 0 0 2 0 0 0 0 1 1 0 0 1 3 1 0 0 0 0 0 13 1 1343.7157 H7BZZ8;A0A096LNK9;B5MCI0;A0A087WVP4;A0A087X1R1;P53814 H7BZZ8 153 165 SMTN Smoothelin yes no 2 0.019071 40.994 By MS/MS 1 0 0 0 248 54 268 596 501 501 72;73;3225 1 AQSLVISPPAPSPR SEIHVEVKAQSLVISP SPPAPSPRKTPVASDQ K A Q P R K 2 1 0 0 0 1 0 0 0 1 1 0 0 0 4 3 0 0 0 1 0 0 14 0 1418.7882 P46013 P46013 573 586 MKI67 Antigen KI-67 yes yes 2 5.2178E-08 100.54 By MS/MS By MS/MS 1 1 8566900 4245300 4321600 249 1361 269 597;598 502;503 503 1783;1784 0 AQSSPASATFPVSVQEPPTKPR GGHRPLSRAQSSPASA QEPPTKPRFTTGLVYD R A Q P R F 3 1 0 0 0 2 1 0 0 0 0 1 0 1 5 4 2 0 0 2 0 0 22 1 2281.1703 P56524 P56524 630 651 HDAC4 Histone deacetylase 4 yes yes 3 0.0016587 61.276 By MS/MS By MS/MS 1 1 4644300 2832800 1811500 250 1417 270 599;600 504;505 505 1906 2 AQSTDSLGTSGSLQSK MFKDGLRRAQSTDSLG TSGSLQSKALGYNYKA R A Q S K A 1 0 0 1 0 2 0 2 0 0 2 1 0 0 0 5 2 0 0 0 0 0 16 0 1565.7533 Q15276;I3L456 Q15276 405 420 RABEP1 Rab GTPase-binding effector protein 1 yes no 2 5.1594E-19 119.96 By MS/MS By MS/MS 1 1 5106600 2696900 2409700 251 1549 271 601;602 506;507 506 2142 2 AQTAPTKTSPR CVGGKRGRAQTAPTKT APTKTSPRNAKKHDEL R A Q P R N 2 1 0 0 0 1 0 0 0 0 0 1 0 0 2 1 3 0 0 0 0 0 11 1 1156.62 Q14669 Q14669 1419 1429 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes yes 3 0.014263 77.192 By MS/MS By matching 1 1 2580800 1102700 1478100 252 1522 272 603;604 508 508 2088;3751 1 AQTLPTSVVTITSESSPGKR QSTPASSRAQTLPTSV SESSPGKREKDKEKDK R A Q K R E 1 1 0 0 0 1 1 1 0 1 1 1 0 0 2 4 4 0 0 2 0 0 20 1 2058.0957 A0A087WUZ3;Q01082 A0A087WUZ3 2328 2347 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 3 1.3567E-44 130.71 By MS/MS By MS/MS 2 2 36882000 19297000 17585000 253 49 273;274 605;606;607;608 509;510;511 510 63;64;65;3221;3222 3 AQTPPGPSLSGSKSPCPQEK ISPYPKVKAQTPPGPS KSPCPQEKSKDSLVQS K A Q E K S 1 0 0 0 1 2 1 2 0 0 1 2 0 0 5 4 1 0 0 0 0 0 20 1 2051.9946 Q9UQ35 Q9UQ35 1001 1020 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0081344 76.237 By MS/MS By MS/MS 1 1 34755000 18715000 16040000 254 2134 275 609;610 512;513 513 3068;3963 2 AQVIYTRNTK IKLVSKHRAQVIYTRN VIYTRNTKGGDAPAAG R A Q T K G 1 1 1 0 0 1 0 0 0 1 0 1 0 0 0 0 2 0 1 1 0 0 10 1 1192.6564 P62851 P62851 105 114 RPS25 40S ribosomal protein S25 yes yes 2 0.019077 51.193 By MS/MS 1 0 0 0 255 1433 276 611 514 514 4325 1 AQVQVESQLSSAR AEISSLQRAQVQVESQ ESQLSSARRDEHRLRQ R A Q A R R 2 1 0 0 0 3 1 0 0 0 1 0 0 0 0 3 0 0 0 2 0 0 13 0 1401.7212 Q6PKC3 Q6PKC3 847 859 TXNDC11 Thioredoxin domain-containing protein 11 yes yes 2 0.0047016 71.451 By matching By MS/MS 1 1 3169900 1573000 1596900 256 1686 277 612;613 515 515 427;428 2356;2357 1 AREGSFESR SGQLFHGRAREGSFES REGSFESRYQQPFEDF R A R S R Y 1 2 0 0 0 0 2 1 0 0 0 0 0 1 0 2 0 0 0 0 0 0 9 1 1037.489 P19174;V9GY71;V9GYH5 P19174 1244 1252 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 2 0.0034318 98.182 By MS/MS 1 3202200 0 3202200 257 1293 278 614 516 516 1700 1 ARELELEACSQELQRHR RGLQEAARARELELEA SQELQRHRQEAEQLRE R A R H R Q 2 3 0 0 1 2 4 0 1 0 3 0 0 0 0 1 0 0 0 0 0 0 17 2 2124.0494 Q9BRK4 Q9BRK4 501 517 LZTS2 Leucine zipper putative tumor suppressor 2 yes yes 3 0.010964 44.601 By MS/MS By matching 1 1 3353300 1725800 1627500 258 1956 279 615;616 517 517 446 1 ARGDSEALDEES SDRQERERARGDSEAL SEALDEES________ R A R E S - 2 1 0 2 0 0 3 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 12 1 1277.5372 Q7Z4V5;A0A087WZ99 Q7Z4V5 660 671 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 2 0.0053194 77.633 By MS/MS By MS/MS 1 1 16820000 8369500 8450100 259 1715 280 617;618 518;519;520;521 518 2406 4 ARKLSTDL PRVIDDSRARKLSTDL ARKLSTDL________ R A R D L - 1 1 0 1 0 0 0 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 8 2 902.51853 H7C4F1 H7C4F1 187 194 AGAP3 yes yes 2 0.016676 66.351 By matching By MS/MS 1 1 15270000 7905800 7363800 260 968 281 619;620 522 522 1298;3546 0 ARSCDSPR NSGSCLCRARSCDSPR ARSCDSPRPRCGGLDC R A R P R P 1 2 0 1 1 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 8 1 947.42431 C9JKR3;B5ME80;F8WAT5;Q9P283 C9JKR3 578 585 SEMA5B Semaphorin-5B yes no 2 0.010522 63.48 By MS/MS 1 0 0 0 261 400 282 621 523 523 1 ARSPTDDKVK RSQEKIGKARSPTDDK SPTDDKVKIEDKSKSK K A R V K I 1 1 0 2 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 2 1115.5935 Q13523 Q13523 255 264 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 3 0.00052005 111.31 By MS/MS By MS/MS 1 1 13361000 5927600 7433800 262 1505 283 622;623 524;525 525 2060 2 ARVGGSDEEASGIPSR KSLEGMKKARVGGSDE EASGIPSRTASLELDL K A R S R T 2 2 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 16 1 1586.7649 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 H7C446 114 129 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2 0.0053964 69.289 By MS/MS By matching 1 1 10072000 6015600 4056500 263 189 284 624;625 526 526 271 1 ARYEMASNPLYR KFQSERSRARYEMASN MASNPLYRKPISTHTV R A R Y R K 2 2 1 0 0 0 1 0 0 0 1 0 1 0 1 1 0 0 2 0 0 0 12 1 1469.7085 P18084 P18084 764 775 ITGB5 Integrin beta-5 yes yes 2 0.018197 41.401 By MS/MS 1 495350 0 495350 264 1287 285 626 527 527 166 1688;4271 0 ASAGTPSLSAGVSPK RRRGRRKRASAGTPSL LSAGVSPKRRALPSVA R A S P K R 3 0 0 0 0 0 0 2 0 0 1 1 0 0 2 4 1 0 0 1 0 0 15 0 1328.6936 Q8TEK3 Q8TEK3 1092 1106 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 6.1817E-05 91.845 By MS/MS By MS/MS 1 1 4866100 2171500 2694600 265 1825 286 627;628 528;529 529 2572 2 ASAPSPNAQVACDHCLK DVWTPPARASAPSPNA VACDHCLKEAAVKTCL R A S L K E 4 0 1 1 2 1 0 0 1 0 1 1 0 0 2 2 0 0 0 1 0 0 17 0 1824.8247 Q14258 Q14258 96 112 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.0029933 57.173 By MS/MS By matching 1 1 4956500 2649400 2307100 266 1520 287 629;630 530 530 2086 1 ASAQSSVR FGPGDQVRASAQSSVR ASAQSSVRSNDSGIQQ R A S V R S 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 3 0 0 0 1 0 0 8 0 804.40898 A0A087X1H5;Q15057 A0A087X1H5 551 558 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 2 0.010085 88.029 By MS/MS By matching 1 1 11434000 6972200 4462100 267 108 288 631;632 531 531 1 ASASRPQPAPADGADPPPAEEPEARPDGEGSPGK PDGASEPRASASRPQP DGEGSPGKARPGTARR R A S G K A 7 2 0 3 0 1 4 4 0 0 0 1 0 0 9 3 0 0 0 0 0 0 34 2 3307.5341 A9UF01;P11274 A9UF01 92 125 BCR/ABL fusion;BCR Breakpoint cluster region protein yes no 4 0.00012474 51.66 By matching By MS/MS 1 1 4088100 2366800 1721300 268 345 289 633;634 532 532 486 1 ASAVLSSVPTTASR ________________ SVPTTASRFALLQVDS M A S S R F 3 1 0 0 0 0 0 0 0 0 1 0 0 0 1 4 2 0 0 2 0 0 14 0 1345.7201 C9J9D2;B4DXS0;Q5VSY0 C9J9D2 2 15 GKAP1 G kinase-anchoring protein 1 yes no 2 0.020747 44.252 By MS/MS 1 953900 953900 0 269 387 290 635 533 533 548;549;3345;3346 1 ASAVSELSPR YGTGSASRASAVSELS AVSELSPRERSPALKS R A S P R E 2 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1015.5298 Q9Y2W1 Q9Y2W1 236 245 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 1.732E-51 166.24 By MS/MS By MS/MS 1 1 142320000 68176000 74142000 270 2146 291 636;637 534;535;536;537 535 3113 4 ASDPQSPPQVSR EEGDPRTRASDPQSPP QSPPQVSRHKSHYRNR R A S S R H 1 1 0 1 0 2 0 0 0 0 0 0 0 0 3 3 0 0 0 1 0 0 12 0 1267.6157 Q7L7X3 Q7L7X3 416 427 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 2 0.0087146 61.641 By MS/MS By MS/MS 1 1 2797500 1480000 1317400 271 1705 292 638;639 538;539 539 2383;2384 2 ASEDTTSGSPPK KVEIGQKRASEDTTSG TTSGSPPKKSSAGPKR R A S P K K 1 0 0 1 0 0 1 1 0 0 0 1 0 0 2 3 2 0 0 0 0 0 12 0 1175.5306 H0YER7;G3V1C3;Q9BZZ5 H0YER7 271 282 API5 Apoptosis inhibitor 5 yes no 2 0.012971 68.676 By matching By MS/MS 1 2 1784200 387350 1396800 272 780 293 640;641;642 540;541 540 1038;1039 0 ASEDTTSGSPPKK KVEIGQKRASEDTTSG TSGSPPKKSSAGPKRD R A S K K S 1 0 0 1 0 0 1 1 0 0 0 2 0 0 2 3 2 0 0 0 0 0 13 1 1303.6256 H0YER7;G3V1C3;Q9BZZ5 H0YER7 271 283 API5 Apoptosis inhibitor 5 yes no 2;3 1.6693E-06 111.66 By MS/MS By MS/MS 2 2 148070000 61102000 86965000 273 780 294 643;644;645;646 542;543;544 542 1038;1039 3 ASEGLDACASPTK EAPLGEMRASEGLDAC DACASPTKSASACNRL R A S T K S 3 0 0 1 1 0 1 1 0 0 1 1 0 0 1 2 1 0 0 0 0 0 13 0 1305.5871 Q92618 Q92618 107 119 ZNF516 Zinc finger protein 516 yes yes 2 0.012711 69.045 By MS/MS By MS/MS 1 1 1005500 0 1005500 274 1852 295 647;648 545;546 545 3873 2 ASEIDQVVPAAQSSPINCEKR EEKASEYRASEIDQVV SPINCEKRENLLPFVG R A S K R E 3 1 1 1 1 2 2 0 0 2 0 1 0 0 2 3 0 0 0 2 0 0 21 1 2298.1274 C9JWX4;C9JC88;O94782 C9JWX4 54 74 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes no 3 0.00068109 77.045 By matching By MS/MS 1 1 5625800 2965100 2660700 275 458 296 649;650 547 547 648 1 ASENGHYELEHLSTPK MKEKLTHKASENGHYE LEHLSTPKLKGSSHSP K A S P K L 1 0 1 0 0 0 3 1 2 0 2 1 0 0 1 2 1 0 1 0 0 0 16 0 1810.8486 O95149 O95149 328 343 SNUPN Snurportin-1 yes yes 3 0.0074404 45.864 By MS/MS By MS/MS 1 1 1980600 1409900 570730 276 1181 297;298 651;652 548;549 549 159 4253 2 ASFDHSPDSLPLR PRGRTKKKASFDHSPD SPDSLPLRSSGRQAKK K A S L R S 1 1 0 2 0 0 0 0 1 0 2 0 0 1 2 3 0 0 0 0 0 0 13 0 1440.6997 Q8NB78 Q8NB78 12 24 KDM1B Lysine-specific histone demethylase 1B yes yes 3 0.0030749 65.956 By MS/MS By MS/MS 1 1 1643800 950910 692850 277 1790 299 653;654 550;551 550 2510 2 ASGDPGASGMSPR GGGGRGGKASGDPGAS GASGMSPRASPLPPPP K A S P R A 2 1 0 1 0 0 0 3 0 0 0 0 1 0 2 3 0 0 0 0 0 0 13 0 1188.5193 Q8NDT2 Q8NDT2 99 111 RBM15B Putative RNA-binding protein 15B yes yes 2 8.7915E-06 106.55 By MS/MS By MS/MS 2 2 4019100 1798900 2220300 278 1800 300 655;656;657;658 552;553;554 552 2529;2530 3 ASGQAFELILSPR QVKELEKRASGQAFEL FELILSPRSKESVPEF R A S P R S 2 1 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 13 0 1387.746 A2A2D0;P16949 A2A2D0 15 27 STMN1 Stathmin yes no 2;3 0 254.72 By MS/MS By MS/MS 5 6 166160000 67074000 99091000 279 312 301;302 659;660;661;662;663;664;665;666;667;668;669 555;556;557;558;559;560;561;562;563;564;565;566;567;568;569;570;571;572;573;574;575;576;577 556 445;446 23 ASGVAVSDGVIK ________________ AVSDGVIKVFNDMKVR M A S I K V 2 0 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 0 0 3 0 0 12 0 1101.603 E9PP50;P23528;E9PS23 E9PP50 2 13 CFL1 Cofilin-1 yes no 2 0.0017726 79.886 By MS/MS By MS/MS 1 1 4936000 2381400 2554700 280 675 303 670;671 578;579 579 914 2 ASLEDAPVDDLTR SPDQISHRASLEDAPV APVDDLTRKFTYLGSQ R A S T R K 2 1 0 3 0 0 1 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 13 0 1400.6783 C9J6P4;Q7Z2W4 C9J6P4 283 295 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0055041 67.019 By matching By MS/MS 1 1 2398500 1032300 1366200 281 446 304 672;673 580 580 639 1 ASLGSLEGEAEAEASSPK KGDLKSSKASLGSLEG EAEASSPKGKFSLFKS K A S P K G 4 0 0 0 0 0 4 2 0 0 2 1 0 0 1 4 0 0 0 0 0 0 18 0 1731.8163 Q09666 Q09666 5748 5765 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0029295 66.939 By MS/MS By matching 1 1 3067600 1357700 1709900 282 1474 305 674;675 581 581 1990 1 ASLSSAPVVLVGDHA KLAQRRQRASLSSAPV VVLVGDHA________ R A S H A - 3 0 0 1 0 0 0 1 1 0 2 0 0 0 1 3 0 0 0 3 0 0 15 0 1421.7514 Q9HBH9 Q9HBH9 451 465 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 yes yes 2 0.0054494 60.157 By MS/MS By matching 1 1 841520 445780 395730 283 2025 306 676;677 582 582 2894;2895 1 ASMSEFLESEDGEVEQQR VCRPKRTKASMSEFLE DGEVEQQRTYSSGHNR K A S Q R T 1 1 0 1 0 2 5 1 0 0 1 0 1 1 0 3 0 0 0 1 0 0 18 0 2069.8848 J3QQW9;Q15022 J3QQW9 515 532 SUZ12 Polycomb protein SUZ12 yes no 2;3 1.8259E-05 96.773 By MS/MS By MS/MS 3 2 22271000 11676000 10595000 284 1025 307;308 678;679;680;681;682 583;584;585;586;587 584 118 1363;1364 5 ASNAFKTWNR MEGYLFKRASNAFKTW NAFKTWNRRWFSIQNN R A S N R R 2 1 2 0 0 0 0 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 10 1 1193.5942 A0A087X1H5;Q15057;H7C3Q8;A0A0U1RQT1;Q96P50 A0A087X1H5 276 285 ACAP2;ACAP3 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2;Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 yes no 2 0.020522 42.287 By MS/MS 1 0 0 0 285 108 309 683 588 588 18 3242 1 ASNTSTPTKGNTETSASASQTNHVK EAAAKAAKASNTSTPT ASQTNHVKDVKKIKIE K A S V K D 3 0 3 0 0 1 1 1 1 0 0 2 0 0 1 5 6 0 0 1 0 0 25 1 2518.1896 Q14004 Q14004 489 513 CDK13 Cyclin-dependent kinase 13 yes yes 3 0.0077328 57.981 By matching By MS/MS 1 1 2274500 1039300 1235200 286 1512 310 684;685 589 589 3744 1 ASPAPGSGHPEGPGAHLDMNSLDR ERKTPEGRASPAPGSG LDMNSLDRAQAAKNKG R A S D R A 3 1 1 2 0 0 1 4 2 0 2 0 1 0 4 3 0 0 0 0 0 0 24 0 2369.0819 O94826 O94826 90 113 TOMM70A Mitochondrial import receptor subunit TOM70 yes yes 3 0.0044642 51.119 By MS/MS By matching 1 1 60148000 27991000 32157000 287 1176 311 686;687 590 590 1571 1 ASPSPQPSSQPLQIHR NDQSPQIRASPSPQPS SQPLQIHRQTPESKNA R A S H R Q 1 1 0 0 0 3 0 0 1 1 1 0 0 0 4 4 0 0 0 0 0 0 16 0 1728.8907 B5MBZ0;Q9HC35 B5MBZ0 143 158 EML4 Echinoderm microtubule-associated protein-like 4 yes no 3 0.017405 45.014 By MS/MS By matching 1 1 2932200 1267000 1665300 288 390 312 688;689 591 591 552 1 ASQFFGLMGKR LQEVKTGKASQFFGLM FFGLMGKRVGGRPLIQ K A S K R V 1 1 0 0 0 1 0 2 0 0 1 1 1 2 0 1 0 0 0 0 0 0 11 1 1240.6387 Q86UU9 Q86UU9 60 70 TAC4 Tachykinin-4;Endokinin-A;Endokinin-A/B;Endokinin-C yes yes 2 0.0023139 75.416 By MS/MS 1 0 0 0 289 1728 313 690 592 592 430 2437 1 ASRVPSSDEEVVEEPQSR FQDSTEPRASRVPSSD VVEEPQSRRTRMSLGT R A S S R R 1 2 0 1 0 1 4 0 0 0 0 0 0 0 2 4 0 0 0 3 0 0 18 1 1999.9447 Q9C0C2 Q9C0C2 1615 1632 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 0.00279 76.693 By MS/MS By matching 1 1 11285000 5482000 5803000 290 1985 314 691;692 593 593 2824;2825 1 ASSFADMMGILK DDCVSLSKASSFADMM ADMMGILKDFHRMKQS K A S L K D 2 0 0 1 0 0 0 1 0 1 1 1 2 1 0 2 0 0 0 0 0 0 12 0 1269.6097 E9PPF9;E9PLD2;Q9H019 E9PPF9 139 150 MTFR1L Mitochondrial fission regulator 1-like yes no 2 0.014469 42.336 By matching By MS/MS 1 1 1104900 554770 550080 291 662 315 693;694 594 594 77;78 896 1 ASSHSSQTQGGGSVTK TSQRSRGRASSHSSQT QGGGSVTKKRKLESTE R A S T K K 1 0 0 0 0 2 0 3 1 0 0 1 0 0 0 5 2 0 0 1 0 0 16 0 1517.707 Q3BDU5;P02545;A0A0C4DGC5;Q5TCI8 Q3BDU5 402 417 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0011191 74.537 By matching By MS/MS 1 1 31752000 14937000 16816000 292 1211 316 695;696 595 595 1608;1609 1 ASSLEDLVLK PCSAPLARASSLEDLV SLEDLVLKEASTAVST R A S L K E 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 10 0 1073.5968 Q15477 Q15477 254 263 SKIV2L Helicase SKI2W yes yes 2 0.0089864 66.27 By MS/MS By MS/MS 1 1 31254000 14144000 17110000 293 1558 317 697;698 596;597 596 2149 2 ASSLGEIDESSELR EPPPAPPRASSLGEID IDESSELRVLDIPGQD R A S L R V 1 1 0 1 0 0 3 1 0 1 2 0 0 0 0 4 0 0 0 0 0 0 14 0 1491.7053 Q16513 Q16513 581 594 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.0002366 83.869 By matching By MS/MS 1 1 62442000 30239000 32203000 294 1573 318 699;700 598 598 2172 1 ASSLNENVDHSALLK GVRLSLPRASSLNENV VDHSALLKLGTSVSER R A S L K L 2 0 2 1 0 0 1 0 1 0 3 1 0 0 0 3 0 0 0 1 0 0 15 0 1596.8107 D3DTX6;Q96SB3 D3DTX6 98 112 PPP1R9B Neurabin-2 yes no 2;3 0.0010968 69.258 By MS/MS By matching 2 2 16790000 8704200 8086300 295 517 319 701;702;703;704 599;600 600 705 2 ASSLNFLNK PPNPRMKRASSLNFLN SSLNFLNKSVEEPTQP R A S N K S 1 0 2 0 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 9 0 992.5291 Q9H0B6;A8MZ87 Q9H0B6 580 588 KLC2 Kinesin light chain 2 yes no 2 0.0018128 113.44 By MS/MS By MS/MS 1 1 28536000 13255000 15281000 296 1988 320 705;706 601;602 601 2837 2 ASSLNVLNVGGK PKNPGMKRASSLNVLN NVLNVGGKAAEDRFQE R A S G K A 1 0 2 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 2 0 0 12 0 1157.6404 H0YG16;H0YJK1;G3V5R9 H0YG16 229 240 KLC1 yes no 2 0.0081789 62.303 By MS/MS By matching 1 1 31004000 15751000 15253000 297 884 321 707;708 603 603 1192 1 ASSLPGSLQR RVSAGSSKASSLPGSL SLPGSLQRSRSDIDVN K A S Q R S 1 1 0 0 0 1 0 1 0 0 2 0 0 0 1 3 0 0 0 0 0 0 10 0 1014.5458 E3W994;J3KR49;A0A0U1RQI6;E7ERI8;E7EW49;O75122;B3KR06;E7ENG2 E3W994 358 367 CLASP2 CLIP-associating protein 2 yes no 2 0.0072533 68.786 By MS/MS By matching 1 1 1605000 734310 870690 298 263 322 709;710 604 604 379 1 ASSLSESSPPK KPLSPDSRASSLSESS LSESSPPKAMKFQAPA R A S P K A 1 0 0 0 0 0 1 0 0 0 1 1 0 0 2 5 0 0 0 0 0 0 11 0 1088.535 F8VS07;F8VQE1;Q9UHB6;F8VRN8 F8VS07 65 75 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.0018958 80.318 By MS/MS By MS/MS 1 2 4067100 1771000 2296000 299 733 323 711;712;713 605;606;607;608 608 974;975 4 ASSLSRPWEK RIQPSADRASSLSRPW SLSRPWEKTDKGATYT R A S E K T 1 1 0 0 0 0 1 0 0 0 1 1 0 0 1 3 0 1 0 0 0 0 10 1 1159.5986 Q5T4P9;Q53GL0 Q5T4P9 54 63 PLEKHO1 Pleckstrin homology domain-containing family O member 1 yes no 2 0.018227 68.515 By MS/MS 1 1071700 0 1071700 300 1597 324 714 609 609 2216 1 ASSPPDRIDIFGR RRERDRERASSPPDRI DRIDIFGRTVSKRSSL R A S G R T 1 2 0 2 0 0 0 1 0 2 0 0 0 1 2 2 0 0 0 0 0 0 13 1 1429.7314 Q9NWB6 Q9NWB6 75 87 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 2;3 0.0093796 67.136 By MS/MS By MS/MS 2 2 64810000 31703000 33107000 301 2063 325 715;716;717;718 610;611 611 2948;2949 2 ASSRVSGSFPEDSSK KEFVARVRASSRVSGS SFPEDSSKERNLVSWE R A S S K E 1 1 0 1 0 0 1 1 0 0 0 1 0 1 1 6 0 0 0 1 0 0 15 1 1539.7165 O15400 O15400 124 138 STX7 Syntaxin-7 yes yes 2;3 0.012293 56.424 By MS/MS 2 3612100 3612100 0 302 1109 326 719;720 612;613 613 1479 2 ASSVGVLSPQKK SEGSMKVKASSVGVLS GVLSPQKKSPPTTMLL K A S K K S 1 0 0 0 0 1 0 1 0 0 1 2 0 0 1 3 0 0 0 2 0 0 12 1 1199.6874 Q9UGU5 Q9UGU5 490 501 HMGXB4 HMG domain-containing protein 4 yes yes 2 0.0008271 100.18 By MS/MS By matching 1 1 8279600 3848300 4431300 303 2097 327 721;722 614 614 3003 1 ASSVSTKESPAR SVKPAQVKASSVSTKE STKESPARKAAPAPGK K A S A R K 2 1 0 0 0 0 1 0 0 0 0 1 0 0 1 4 1 0 0 1 0 0 12 1 1218.6204 J3KQ96;E7ETY2;Q13428 J3KQ96 225 236 TCOF1 Treacle protein yes no 2;3 0.0008402 87.824 By MS/MS By MS/MS 2 2 26558000 12607000 13951000 304 591 328 723;724;725;726 615;616;617 615 793 3 ASTASPCNNNINAATAVALQEPR PSTTKPSRASTASPCN AVALQEPRKLSYAEVC R A S P R K 6 1 4 0 1 1 1 0 0 1 1 0 0 0 2 2 2 0 0 1 0 0 23 0 2369.1394 Q71RC2 Q71RC2 593 615 LARP4 La-related protein 4 yes yes 3 0.00060949 65.901 By MS/MS By matching 1 1 13499000 7664700 5834100 305 1700 329 727;728 618 618 3826 1 ASTSDYQVISDR RPLATAYKASTSDYQV DYQVISDRQTPKKDES K A S D R Q 1 1 0 2 0 1 0 0 0 1 0 0 0 0 0 3 1 0 1 1 0 0 12 0 1340.6208 Q8NFH5 Q8NFH5 295 306 NUP35 Nucleoporin NUP53 yes yes 2 0.0081114 62.466 By MS/MS By matching 1 1 1351700 533990 817690 306 1804 330 729;730 619 619 2543;2544 1 ASTSDYQVISDRQTPK RPLATAYKASTSDYQV ISDRQTPKKDESLVSK K A S P K K 1 1 0 2 0 2 0 0 0 1 0 1 0 0 1 3 2 0 1 1 0 0 16 1 1794.8748 Q8NFH5 Q8NFH5 295 310 NUP35 Nucleoporin NUP53 yes yes 3 0.0059611 54.09 By matching By MS/MS 1 1 2388300 1387500 1000800 307 1804 331 731;732 620 620 2543;2544 1 ASVSPMDEPVPDSESPIEK DAKDENERASVSPMDE DSESPIEKVLSPLRSP R A S E K V 1 0 0 2 0 0 3 0 0 1 0 1 1 0 4 4 0 0 0 2 0 0 19 0 2012.9249 P46821 P46821 1375 1393 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0076101 54.974 By matching By MS/MS 1 1 3847600 1758400 2089200 308 1367 332 733;734 621 621 1805;1806 1 ASVTGYLLVYESVDGTVK LLTWRPPRASVTGYLL ESVDGTVKEVIVGPDT R A S V K E 1 0 0 1 0 0 1 2 0 0 2 1 0 0 0 2 2 0 2 4 0 0 18 0 1899.983 F5H7V9;E9PC84;J3QSU6;P24821;H0YGZ3 F5H7V9 1549 1566 TNC Tenascin yes no 2;3 3.4345E-39 161.87 By MS/MS By MS/MS 2 2 52968000 20010000 32957000 309 723 333 735;736;737;738 622;623;624;625 622 4 ATADDELSFK AIAKYDFKATADDELS ADDELSFKRGDILKVL K A T F K R 2 0 0 2 0 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 10 0 1095.5084 P62993;J3KT38;J3QRL5 P62993 11 20 GRB2 Growth factor receptor-bound protein 2 yes no 2 2.8619E-06 131.62 By MS/MS By MS/MS 1 1 9543300 6343400 3199900 310 1436 334 739;740 626;627 626 2 ATADQLYIQSK LRKGSGARATADQLYI DQLYIQSKKSQTKALE R A T S K K 2 0 0 1 0 2 0 0 0 1 1 1 0 0 0 1 1 0 1 0 0 0 11 0 1236.635 D6RIA3 D6RIA3 700 710 LOC285556 yes yes 2 0.014236 42.976 By MS/MS 1 1749700 1749700 0 311 539 335 741 628 628 718;4137 1 ATAGDTHLGGEDFDNR DAGVFEVKATAGDTHL GGEDFDNRLVNHFMEE K A T N R L 2 1 1 3 0 0 1 3 1 0 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1674.7234 P48741;P17066;Q53FA3;P34931;A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 223 238 HSPA7;HSPA6;HSPA1L;HSPA1B;HSPA1A Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 6;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 0.001 73.834 By matching By MS/MS 2 2 7540600 3503600 4037100 312 1280;242 336 742;743;744;745 629;630 629 1 ATAPQTQHVSPMR EKSSPGHRATAPQTQH TQHVSPMRQVEPPAKK R A T M R Q 2 1 0 0 0 2 0 0 1 0 0 0 1 0 2 1 2 0 0 1 0 0 13 0 1422.7038 E9PL71;E9PQ49;E9PI39;E9PQZ1;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PK06;E9PPR1;E9PL12 E9PL71 100 112 EEF1D Elongation factor 1-delta yes no 2;3 6.1493E-12 128.74 By MS/MS By MS/MS 4 5 350580000 173500000 177090000 313 112 337;338;339 746;747;748;749;750;751;752;753;754 631;632;633;634;635;636;637;638;639 638 17 144;3245 8 ATGAALTPTEER LDLSDRHRATGAALTP ALTPTEERRTSFSTSD R A T E R R 3 1 0 0 0 0 2 1 0 0 1 0 0 0 1 0 3 0 0 0 0 0 12 0 1215.6095 M0R300;M0R0P8;Q13459 M0R300 1340 1351 MYO9B Unconventional myosin-IXb yes no 2 0.00017143 68.277 By MS/MS By MS/MS 1 1 3516000 1791300 1724700 314 1072 340 755;756 640;641 641 3589 1 ATGDGSSPELPSLER QSIRKKRRATGDGSSP PELPSLERKNKRRKIK R A T E R K 1 1 0 1 0 0 2 2 0 0 2 0 0 0 2 3 1 0 0 0 0 0 15 0 1514.7213 A0A0C4DGM5;Q9H2Y7;H3BS99 A0A0C4DGM5 205 219 ZNF106 Zinc finger protein 106 yes no 2 0.0097209 55.335 By MS/MS By matching 1 1 1446900 738690 708240 315 214 341 757;758 642 642 309 1 ATISDEEIER LPSASTSKATISDEEI ISDEEIERQLKALGVD K A T E R Q 1 1 0 1 0 0 3 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 10 0 1161.5513 C9J0A7;Q9UQN3 C9J0A7 166 175 CHMP2B Charged multivesicular body protein 2b yes no 2 0.0021899 96.604 By MS/MS By MS/MS 1 1 96982000 43976000 53006000 316 431 342 759;760 643;644 643 613 2 ATNESEDEIPQLVPIGK GRGKAQVKATNESEDE PQLVPIGKKTPANEKV K A T G K K 1 0 1 1 0 1 3 1 0 2 1 1 0 0 2 1 1 0 0 1 0 0 17 0 1838.9262 J3QSV6;O76021 J3QSV6 356 372 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2;3 2.0514E-72 164.5 By MS/MS By MS/MS 2 2 176850000 88157000 88697000 317 1032 343 761;762;763;764 645;646;647;648;649 648 1370 5 ATNESEDEIPQLVPIGKK GRGKAQVKATNESEDE QLVPIGKKTPANEKVE K A T K K T 1 0 1 1 0 1 3 1 0 2 1 2 0 0 2 1 1 0 0 1 0 0 18 1 1967.0211 J3QSV6;O76021 J3QSV6 356 373 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 3 0.013488 41.962 By MS/MS 1 9835300 9835300 0 318 1032 344 765 650 650 1370 1 ATPATAPGTSPR VPGKRLPRATPATAPG TAPGTSPRANGLSVER R A T P R A 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 1 3 0 0 0 0 0 12 0 1125.5778 H0Y873;Q96P47 H0Y873 20 31 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 2 0.0013674 88.056 By matching By MS/MS 1 1 1223900 473460 750420 319 848 345 766;767 651 651 1142 1 ATPELGSSENSASSPPR YFTGKIPKATPELGSS NSASSPPRFKTEKMES K A T P R F 2 1 1 0 0 0 2 1 0 0 1 0 0 0 3 5 1 0 0 0 0 0 17 0 1685.7857 Q9BX63 Q9BX63 1019 1035 BRIP1 Fanconi anemia group J protein yes yes 2 0.0030736 63.681 By matching By MS/MS 1 1 2612000 1397000 1215000 320 1971 346 768;769 652 652 2796;2797 1 ATPSQLNSPIHQRTSR WTTWWQAKATPSQLNS PIHQRTSRCRQQQSRG K A T S R C 1 2 1 0 0 2 0 0 1 1 1 0 0 0 2 3 2 0 0 0 0 0 16 1 1791.934 K7EJF7 K7EJF7 34 49 TMUB2 yes yes 2 0.011249 46.121 By MS/MS 1 2251700 0 2251700 321 1036 347 770 653 653 396 1376;3574 1 ATQCEDLLSQAKSGK LDIAKRLKATQCEDLL LSQAKSGKFNPHVHVE K A T G K F 2 0 0 1 1 2 1 1 0 0 2 2 0 0 0 2 1 0 0 0 0 0 15 1 1634.7934 H0YBM4;H0YBF7;A0A0A0MRE5;Q9ULH1 H0YBM4 96 110 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 2 0.0067773 51.147 By matching By MS/MS 1 1 14342000 6635500 7706700 322 138 348 771;772 654 654 341 186;3255 1 ATSACAPISSPK VPGKRPPRATSACAPI CAPISSPKTNGLSKDM R A T P K T 3 0 0 0 1 0 0 0 0 1 0 1 0 0 2 3 1 0 0 0 0 0 12 0 1188.5809 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C211 A0A087X1U1 359 370 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.00013274 104.81 By MS/MS By MS/MS 1 1 3700500 2007900 1692600 323 111 349 773;774 655;656 655 142 2 ATSEEDVSIKSPICEK ENQSHDYKATSEEDVS IKSPICEKQDESNTVI K A T E K Q 1 0 0 1 1 0 3 0 0 2 0 2 0 0 1 3 1 0 0 1 0 0 16 1 1791.856 Q5UIP0 Q5UIP0 1606 1621 RIF1 Telomere-associated protein RIF1 yes yes 3 0.01127 48.919 By MS/MS By matching 1 1 1771500 802150 969390 324 1641 350 775;776 657 657 2281 1 ATVTPSPVK KMPKPRLKATVTPSPV TVTPSPVKGKGKVGRP K A T V K G 1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 1 2 0 0 2 0 0 9 0 898.51238 Q9H1E3 Q9H1E3 176 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 5.6755E-94 187.16 By MS/MS By MS/MS 1 2 315330000 162470000 152860000 325 1992 351;352 777;778;779 658;659;660;661;662 659 2845;3922 5 ATVTPSPVKGK KMPKPRLKATVTPSPV TPSPVKGKGKVGRPTA K A T G K G 1 0 0 0 0 0 0 1 0 0 0 2 0 0 2 1 2 0 0 2 0 0 11 1 1083.6288 Q9H1E3 Q9H1E3 176 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 7.0651E-143 198.97 By MS/MS By MS/MS 3 3 282120000 149500000 132620000 326 1992 353;354 780;781;782;783;784;785 663;664;665;666;667;668;669;670;671;672;673;674;675;676 664 2845;3922 14 ATVTPSPVKGKGK KMPKPRLKATVTPSPV SPVKGKGKVGRPTASK K A T G K V 1 0 0 0 0 0 0 2 0 0 0 3 0 0 2 1 2 0 0 2 0 0 13 2 1268.7452 Q9H1E3 Q9H1E3 176 188 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0010595 76.358 By MS/MS By matching 1 1 1972700 1122900 849720 327 1992 355 786;787 677 677 2845;3922 1 ATYINLKPAR NPEAEEMKATYINLKP YINLKPARKYRFH___ K A T A R K 2 1 1 0 0 0 0 0 0 1 1 1 0 0 1 0 1 0 1 0 0 0 10 1 1145.6557 Q9H467 Q9H467 273 282 CUEDC2 CUE domain-containing protein 2 yes yes 2 0.017098 60.828 By matching By MS/MS 1 1 2274600 1125900 1148700 328 2005 356 788;789 678 678 4436 1 AVAGVMITASHNR PYAVQKLKAVAGVMIT MITASHNRKEDNGYKV K A V N R K 3 1 1 0 0 0 0 1 1 1 0 0 1 0 0 1 1 0 0 2 0 0 13 0 1325.6874 Q6PCE3 Q6PCE3 166 178 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 2 0.00037968 86.738 By MS/MS By MS/MS 2 2 11977000 4341600 7635200 329 1682 357;358 790;791;792;793 679;680;681 681 247 2352;3816 3 AVCSTYLQSR GSASHVSKAVCSTYLQ CSTYLQSRYYRAPEII K A V S R Y 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 2 1 0 1 1 0 0 10 0 1183.5656 H7BXX9;Q5SQL3;J3KP92;Q9H2X6;Q86Z02 H7BXX9 349 358 HIPK2;HIPK1 Homeodomain-interacting protein kinase 2;Homeodomain-interacting protein kinase 1 yes no 2 0.0059548 83.647 By matching By MS/MS 1 1 1738600 805580 933010 330 941 359 794;795 682 682 4204 0 AVDKPPSPSPIEMK NGSLCLEKAVDKPPSP SPSPIEMKKASNPVEV K A V M K K 1 0 0 1 0 0 1 0 0 1 0 2 1 0 4 2 0 0 0 1 0 0 14 1 1494.7752 A0A0J9YYJ9;A0A0J9YXG2;Q9H165 A0A0J9YYJ9 80 93 BCL11A B-cell lymphoma/leukemia 11A yes no 3 0.007613 56.768 By MS/MS By MS/MS 1 1 2670700 1181600 1489100 331 255 360 796;797 683;684 684 39 369 2 AVFPSIVGR FAGDDAPRAVFPSIVG VFPSIVGRPRHQGVMV R A V G R P 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 2 0 0 9 0 944.54435 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8;P68133;P68032;Q6S8J3;C9JUM1;C9JZR7;A6NL76;P63267;P62736;A5A3E0;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG38;F8WCH0 P63261 29 37 ACTG1;ACTB;ACTA1;ACTC1;POTEE;ACTG2;ACTA2;POTEF;POTEI Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member F;POTE ankyrin domain family member I yes no 2 0.016991 68.383 By MS/MS By matching 1 1 2059400 1304100 755230 332 1422 361 798;799 685 685 1 AVFVDLEPTVIDEVR GAGKHVPRAVFVDLEP PTVIDEVRTGTYRQLF R A V V R T 1 1 0 2 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 4 0 0 15 0 1700.8985 P68363;F5H5D3;Q9BQE3;Q71U36;F8VVB9;F8VRK0;F8VX09;F8VWV9;F8VRZ4;F8VS66;F8VQQ4 P68363 65 79 TUBA1B;TUBA1C;TUBA1A Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain yes no 2;3 1.1694E-13 140.39 By MS/MS By MS/MS 2 2 27889000 12777000 15111000 333 1439 362 800;801;802;803 686;687;688 687 3 AVIVSSPK SSSKPSIKAVIVSSPK AVIVSSPKAKATVSKT K A V P K A 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 2 0 0 0 2 0 0 8 0 799.48035 Q14966 Q14966 1396 1403 ZNF638 Zinc finger protein 638 yes yes 2 0.0049558 117.7 By MS/MS By MS/MS 1 1 6316500 3127400 3189100 334 1531 363 804;805 689;690;691;692 691 2109 4 AVLASQTSLTPLGR LSNLSERRAVLASQTS TSLTPLGRNGRSIPAT R A V G R N 2 1 0 0 0 1 0 1 0 0 3 0 0 0 1 2 2 0 0 1 0 0 14 0 1412.7987 E7EPP7;Q6ZWJ1 E7EPP7 434 447 STXBP4 Syntaxin-binding protein 4 yes no 2 1.2128E-09 113.72 By matching By MS/MS 1 1 2843300 1295100 1548200 335 572 364 806;807 693 693 3411 1 AVLSDSPQLSEGK HLVEEVARAVLSDSPQ SPQLSEGKEIKLEELI R A V G K E 1 0 0 1 0 1 1 1 0 0 2 1 0 0 1 3 0 0 0 1 0 0 13 0 1329.6776 Q5SYF9;Q5VY60;Q7Z4H7 Q5SYF9 63 75 HAUS6 HAUS augmin-like complex subunit 6 yes no 2 0.00056053 94.09 By MS/MS By MS/MS 1 1 6888100 2949300 3938800 336 1620 365 808;809 694;695 695 2251 2 AVLYADYR HEDRPSSRAVLYADYR AVLYADYRAPGPARFD R A V Y R A 2 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 8 0 969.49198 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 433 440 KIRREL Kin of IRRE-like protein 1 yes no 2 0.008809 77.058 By MS/MS By MS/MS 2 2 3770100 1732900 2037200 337 375 366;367 810;811;812;813 696;697;698 696 4087;4088 3 AVLYADYRAPGPAR HEDRPSSRAVLYADYR YRAPGPARFDGRPSSR R A V A R F 4 2 0 1 0 0 0 1 0 0 1 0 0 0 2 0 0 0 2 1 0 0 14 1 1518.7943 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 433 446 KIRREL Kin of IRRE-like protein 1 yes no 2;3 0.00039216 71.806 By MS/MS By MS/MS 2 2 13058000 6055300 7002200 338 375 368 814;815;816;817 699;700;701 699 4087;4088 2 AVMDDFAAFVEK KATKEQLKAVMDDFAA DFAAFVEKCCKADDKE K A V E K C 3 0 0 2 0 0 1 0 0 0 0 1 1 2 0 0 0 0 0 2 0 0 12 0 1341.6275 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 570 581 ALB Serum albumin yes no 2 0.0058264 79.693 By MS/MS By MS/MS 2 2 4958500 2814400 2144200 + 339 209 369;370 818;819;820;821 702;703;704 704 27 3 AVNTQALSGAGILR LESSELPRAVNTQALS LSGAGILRMVNKAADA R A V L R M 3 1 1 0 0 1 0 2 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1369.7678 O60749 O60749 270 283 SNX2 Sorting nexin-2 yes yes 2 0.0022194 71.354 By MS/MS By MS/MS 1 1 2171500 982720 1188800 340 1143 371 822;823 705;706 705 1522 2 AVPMAPAPASPGSSNDSSAR PCEFEHRKAVPMAPAP SSNDSSARSQERAGGL K A V A R S 5 1 1 1 0 0 0 1 0 0 0 0 1 0 4 5 0 0 0 1 0 0 20 0 1868.8687 Q66K74 Q66K74 750 769 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3 0.020511 41.912 By MS/MS By matching 1 1 3605800 1626800 1979000 341 1662 372 824;825 707 707 2323 1 AVPPVSPELR TLSPEHWKAVPPVSPE PPVSPELRKPGPPLSP K A V L R K 1 1 0 0 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 0 1063.6026 Q96JM3 Q96JM3 411 420 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.004295 83.182 By MS/MS By MS/MS 1 2 4655900 1842100 2813800 342 1903 373 826;827;828 708;709;710;711;712;713 712 2688 6 AVPSPTTGEEGSVHSR ENVSEALRAVPSPTTG EEGSVHSREAKESSAA R A V S R E 1 1 0 0 0 0 2 2 1 0 0 0 0 0 2 3 2 0 0 2 0 0 16 0 1609.7696 Q5SYE7 Q5SYE7 1230 1245 NHSL1 NHS-like protein 1 yes yes 3 2.6726E-07 100.68 By MS/MS By matching 1 1 5459600 2951600 2508000 343 1619 374 829;830 714 714 2250 1 AVPSSPAGSAAR LAPRPGPRAVPSSPAG SPAGSAARGR______ R A V A R G 4 1 0 0 0 0 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 12 0 1069.5516 F8WBN8;B0QYH1;Q8IWD4 F8WBN8 49 60 CCDC117 Coiled-coil domain-containing protein 117 yes no 2 0.0090417 61.423 By MS/MS By MS/MS 1 1 2739100 1262500 1476600 344 350 375 831;832 715;716;717 717 521 3 AVPVESPVQKV RLKQRGKKAVPVESPV VESPVQKV________ K A V K V - 1 0 0 0 0 1 1 0 0 0 0 1 0 0 2 1 0 0 0 4 0 0 11 1 1151.655 Q8TB61 Q8TB61 422 432 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 yes yes 2 0.006715 80.17 By matching By MS/MS 1 1 2924200 1398300 1525900 345 1813 376 833;834 718 718 2555 1 AVSPTEPTPR TRPMTMHRAVSPTEPT SPTEPTPRSLSALSAY R A V P R S 1 1 0 0 0 0 1 0 0 0 0 0 0 0 3 1 2 0 0 1 0 0 10 0 1053.5455 H3BMH3;Q6PJI9 H3BMH3 112 121 WDR59 WD repeat-containing protein 59 yes no 2 0.012593 65.179 By MS/MS 1 0 0 0 346 907 377 835 719 719 1217 1 AVSTVVVTTAPSPK GTASGSSKAVSTVVVT VTTAPSPKQAPEQQ__ K A V P K Q 2 0 0 0 0 0 0 0 0 0 0 1 0 0 2 2 3 0 0 4 0 0 14 0 1355.766 Q6P4R8 Q6P4R8 1280 1293 NFRKB Nuclear factor related to kappa-B-binding protein yes yes 2 0.00019868 80.632 By MS/MS By MS/MS 1 1 2576100 1285300 1290800 347 1678 378 836;837 720;721 720 2348 2 AVSVPASFFR PRGRRSRRAVSVPASF SVPASFFRRLAPSPAR R A V F R R 2 1 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 0 2 0 0 10 0 1079.5764 O14654 O14654 425 434 IRS4 Insulin receptor substrate 4 yes yes 2 9.3266E-05 113.69 By MS/MS By MS/MS 2 2 13154000 6120100 7033900 348 1094 379;380 838;839;840;841 722;723;724;725;726;727;728;729;730 727 1450;1451 8 AVTAVTATAASDR ________________ TATAASDRMESDSDSD M A V D R M 5 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 2 0 0 13 0 1232.6361 K7EQ06;K7EJP7 K7EQ06 2 14 HDGFRP2 yes no 2 0.00054666 78.985 By MS/MS 1 464760 0 464760 349 1038 381 842 731 731 1378 1 AVTEQGAELSNEER DDMATCMKAVTEQGAE AELSNEERNLLSVAYK K A V E R N 2 1 1 0 0 1 4 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 14 0 1531.7114 E9PG15;P27348 E9PG15 28 41 YWHAQ 14-3-3 protein theta yes no 2 0.010855 59.418 By matching By MS/MS 1 1 1546000 646990 899000 350 629 382 843;844 732 732 1 AVTGQTTQVSPPVIAGR FAKPINSKAVTGQTTQ SPPVIAGRVLSQSTPG K A V G R V 2 1 0 0 0 2 0 2 0 1 0 0 0 0 2 1 3 0 0 3 0 0 17 0 1680.9159 Q6MZP7 Q6MZP7 255 271 LIN54 Protein lin-54 homolog yes yes 2 0.019772 48.216 By MS/MS By matching 1 1 900330 588190 312140 351 1671 383 845;846 733 733 2337 1 AVTIANSPSKPSEK AKMEHGPKAVTIANSP SPSKPSEKDSVVSLES K A V E K D 2 0 1 0 0 0 1 0 0 1 0 2 0 0 2 3 1 0 0 1 0 0 14 1 1427.762 Q8NEF9 Q8NEF9 197 210 SRFBP1 Serum response factor-binding protein 1 yes yes 2;3 0.00018783 80.507 By MS/MS By MS/MS 2 2 7148000 3481100 3666900 352 1802 384 847;848;849;850 734;735;736;737 737 2533;2534 4 AVTTVTQSTPVPGPSVPPPEELQVSPGPR TVSSTLTRAVTTVTQS LQVSPGPRQQLPPRQL R A V P R Q 1 1 0 0 0 2 2 2 0 0 1 0 0 0 8 3 4 0 0 5 0 0 29 0 2923.5291 P51610;H7C1C4 P51610 1483 1511 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 3 0.0027331 47.044 By MS/MS 1 29153000 0 29153000 353 1394 385 851 738 738 1876 1 AVVSPPKFVFGSESVK STSETTPKAVVSPPKF VFGSESVKSIFSSEKS K A V V K S 1 0 0 0 0 0 1 1 0 0 0 2 0 2 2 3 0 0 0 4 0 0 16 1 1676.9138 P49792;J3KNE0;Q7Z3J3;A6NKT7;F8VYC4;P0DJD0;P0DJD1 P49792 2507 2522 RANBP2;RGPD3;RGPD4;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 yes no 2 0.01123 60.549 By MS/MS By matching 1 1 2321200 1113500 1207700 354 1384 386 852;853 739 739 1861 1 AVVVSPKEENK SSPRQVKRAVVVSPKE VSPKEENKAAEPPPPK R A V N K A 1 0 1 0 0 0 2 0 0 0 0 2 0 0 1 1 0 0 0 3 0 0 11 1 1198.6558 G3V5E1;O75909 G3V5E1 336 346 CCNK Cyclin-K yes no 2 3.7405E-15 143.55 By MS/MS By MS/MS 1 1 11716000 5892100 5824000 355 802 387 854;855 740;741;742 742 1062 3 AVYIGVHVPFSK KEELESHRAVYIGVHV GVHVPFSKESRRRHRH R A V S K E 1 0 0 0 0 0 0 1 1 1 0 1 0 1 1 1 0 0 1 3 0 0 12 0 1315.7289 C9JRP1;A0A0A0MST8;E9PFN4;Q9Y6M7 C9JRP1 42 53 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 yes no 2 0.00082307 80.231 By MS/MS By MS/MS 1 1 1449500 498450 951020 356 476 388 856;857 743;744 744 4112 2 AWLDEDSNLSPSPLR GVPLEQYRAWLDEDSN NLSPSPLRDLSGGLGG R A W L R D 1 1 1 2 0 0 1 0 0 0 3 0 0 0 2 3 0 1 0 0 0 0 15 0 1698.8213 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 121 135 INO80B;INO80B-WBP1 INO80 complex subunit B yes no 2 0.015714 52.254 By MS/MS 1 827620 0 827620 357 1983 389 858 745 745 2820 1 AYEDLEFQQLER EQLDVAQRAYEDLEFQ LEFQQLERESRQEEED R A Y E R E 1 1 0 1 0 2 3 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 12 0 1539.7205 M0R353;Q6NSJ2 M0R353 38 49 PHLDB3 Pleckstrin homology-like domain family B member 3 yes no 2 8.2279E-06 107.83 By MS/MS By MS/MS 1 1 2066200 812050 1254100 358 1076 390 859;860 746;747 747 4221 2 AYLEGLCVEWLR AREAEQWRAYLEGLCV GLCVEWLRRYLENGKE R A Y L R R 1 1 0 0 1 0 2 1 0 0 3 0 0 0 0 0 0 1 1 1 0 0 12 0 1507.7493 A0A140TA13;A0A140T953;P30685;P30498;P30495;P30491;P30490;P30484;P30464;P18465;P18464;P10319;A0A140T9G0;A0A140T9T1;A0A140T9W2;A0A140T9U0;A0A140T9M0;P04222;P30488;P30487 P30488 182 193 HLA-B;HLA-C HLA class I histocompatibility antigen, B-35 alpha chain;HLA class I histocompatibility antigen, B-78 alpha chain;HLA class I histocompatibility antigen, B-56 alpha chain;HLA class I histocompatibility antigen, B-53 alpha chain;HLA class I histocompatibility antigen, B-52 alpha chain;HLA class I histocompatibility antigen, B-46 alpha chain;HLA class I histocompatibility antigen, B-15 alpha chain;HLA class I histocompatibility antigen, B-57 alpha chain;HLA class I histocompatibility antigen, B-51 alpha chain;HLA class I histocompatibility antigen, B-58 alpha chain;HLA class I histocompatibility antigen, Cw-3 alpha chain;HLA class I histocompatibility antigen, B-50 alpha chain;HLA class I histocompatibility antigen, B-49 alpha chain no no 2 2.2748E-05 107.79 By MS/MS By MS/MS 1 1 1970500 1266700 703830 359 281;1329 391 861;862 748;749 749 2 AYQDQISPVPGAPK TELIERLRAYQDQISP SPVPGAPKAPAATSIL R A Y P K A 2 0 0 1 0 2 0 1 0 1 0 1 0 0 3 1 0 0 1 1 0 0 14 0 1469.7514 E7ER32;A0A087X287;B0QY83;A0A087WU73;W0Z7M9;Q969V6 E7ER32 379 392 MKL1;mkl1 MKL/myocardin-like protein 1 yes no 2 2.5981E-29 146.27 By matching By MS/MS 1 1 10485000 5478600 5006300 360 38 392 863;864 750 750 44 1 AYQHGGVTGLSQY DSTYQGERAYQHGGVT GVTGLSQY________ R A Y Q Y - 1 0 0 0 0 2 0 3 1 0 1 0 0 0 0 1 1 0 2 1 0 0 13 0 1379.647 Q92900 Q92900 1117 1129 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.00014802 97.597 By MS/MS By MS/MS 1 1 1677100 780590 896520 361 1866 393 865;866 751;752 752 4411 2 AYSSFGGGR DFDTYDDRAYSSFGGG YSSFGGGRGSRGSAGG R A Y G R G 1 1 0 0 0 0 0 3 0 0 0 0 0 1 0 2 0 0 1 0 0 0 9 0 900.40898 Q15056 Q15056 11 19 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 1.0696E-09 101.6 By MS/MS By MS/MS 1 2 2915100 1317100 1598000 362 1541 394 867;868;869 753;754;755 755 4354 3 CAAPRPPSSSPEQR CPETAEAKCAAPRPPS PSSSPEQRTGQPSAPG K C A Q R T 2 2 0 0 1 1 1 0 0 0 0 0 0 0 4 3 0 0 0 0 0 0 14 1 1538.726 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 551 564 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 2;3 0.012826 61.649 By MS/MS By MS/MS 2 3 8988500 3679300 5309200 363 655 395 870;871;872;873;874 756;757;758 757 887;888;889 3 CAPSAGSPAAAVGR GTERGPGRCAPSAGSP SPAAAVGRESPGAAAT R C A G R E 5 1 0 0 1 0 0 2 0 0 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1270.6088 Q7L2J0 Q7L2J0 54 67 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 0.011119 56.514 By MS/MS By MS/MS 1 1 5900900 2699200 3201700 364 1703 396 875;876 759;760 759 2376;2377 2 CCSPPNELGFR SENEAIKRCCSPPNEL PPNELGFRRGSSYSKH R C C F R R 0 1 1 0 2 0 1 1 0 0 1 0 0 1 2 1 0 0 0 0 0 0 11 0 1335.57 H7C3H4;H7BZ93;C9JG86;H7BXT4;Q9BYW2 H7C3H4 164 174 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.005926 70.089 By MS/MS By matching 1 1 2669600 1596700 1072900 365 963 397 877;878 761 761 1293 1 CCTPQLTR CGSCVDGRCCTPQLTR CCTPQLTRTVKMRFRC R C C T R T 0 1 0 0 2 1 0 0 0 0 1 0 0 0 1 0 2 0 0 0 0 0 8 0 1034.4637 O00622 O00622 322 329 CYR61 Protein CYR61 yes yes 2 0.018794 43.246 By MS/MS 1 0 0 0 366 1089 398 879 762 762 3590;3591 1 CDSSPDSAEDVR QFSVLFTKCDSSPDSA PDSAEDVRKLCPDCPL K C D V R K 1 1 0 3 1 0 1 0 0 0 0 0 0 0 1 3 0 0 0 1 0 0 12 0 1336.5201 CON__P12763;P02765 CON__P12763 132 143 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 2 0.0014051 86.498 By MS/MS By MS/MS 2 2 4532100 1915700 2616500 + 367 505 399 880;881;882;883 763;764;765;766 764 690 4 CDSSPDSAEDVRK QFSVLFTKCDSSPDSA DSAEDVRKLCPDCPLL K C D R K L 1 1 0 3 1 0 1 0 0 0 0 1 0 0 1 3 0 0 0 1 0 0 13 1 1464.6151 CON__P12763;P02765 CON__P12763 132 144 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 2 0.0013825 88.224 By MS/MS By MS/MS 1 1 3837300 1822000 2015300 + 368 505 400 884;885 767;768;769 768 690 3 CDVMYGIEDTQDTVSLTVDGVVFHYR ASDAGLYRCDVMYGIE DGVVFHYRAATSRYTL R C D Y R A 0 1 0 4 1 1 1 2 1 1 1 0 1 1 0 1 3 0 2 5 0 0 26 0 3018.3739 E9PF17;P13611;Q86W61;D6RGZ6 E9PF17 82 107 VCAN Versican core protein yes no 3 6.0356E-06 72.532 By MS/MS By MS/MS 1 1 10121000 5335100 4785500 369 620 401 886;887 770;771 771 74 2 CETSASELER FNRDDRGRCETSASEL TSASELERMNPGPGGK R C E E R M 1 1 0 0 1 0 3 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 10 0 1180.503 H3BTQ3;P41440 H3BTQ3 220 229 SLC19A1 Folate transporter 1 yes no 2 0.00017941 112.94 By MS/MS By MS/MS 1 1 2606600 1020100 1586500 370 933 402 888;889 772;773 772 1250 2 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK PPVVLRLKCGSGPVHI DEEEEDVKLLSISGKR K C G V K L 2 0 0 3 1 1 8 3 2 1 1 1 0 0 1 3 0 0 0 4 0 0 31 0 3379.4634 P06748;E5RI98 P06748 104 134 NPM1 Nucleophosmin yes no 3;4 8.7489E-19 95.968 By MS/MS By MS/MS 2 2 335610000 192990000 142620000 371 1228 403 890;891;892;893 774;775;776;777;778 775 1617 5 CGSSEDLHDSVR RDSEEGPRCGSSEDLH EDLHDSVREGPDLDRP R C G V R E 0 1 0 2 1 0 1 1 1 0 1 0 0 0 0 3 0 0 0 1 0 0 12 0 1360.5677 Q7Z4V5 Q7Z4V5 631 642 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 2 0.01102 60.102 By matching By MS/MS 1 1 4923500 2339600 2583900 372 1715 404 894;895 779 779 2407 1 CHSLGYNFIHK LIPHGHRKCHSLGYNF LGYNFIHKMNTAEFKS K C H H K M 0 0 1 0 1 0 0 1 2 1 1 1 0 1 0 1 0 0 1 0 0 0 11 0 1374.6503 Q86X27 Q86X27 341 351 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes yes 3 0.0011235 85.963 By matching By MS/MS 1 1 1442100 809960 632100 373 1737 405 896;897 780 780 2443 1 CIACQAAKLSPR QNKVTDNKCIACQAAK QAAKLSPRDTAKQTGI K C I P R D 3 1 0 0 2 1 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 12 1 1373.6908 P49790 P49790 678 689 NUP153 Nuclear pore complex protein Nup153 yes yes 2;3 0.0045336 79.639 By MS/MS By MS/MS 2 2 19231000 10453000 8777500 374 1383 406 898;899;900;901 781;782;783 782 1850 3 CIFMSETQSSPTK EDPPAKRKCIFMSETQ ETQSSPTKGVLMYQPS K C I T K G 0 0 0 0 1 1 1 0 0 1 0 1 1 1 1 3 2 0 0 0 0 0 13 0 1514.6745 B4DGW0;A0A087WUY7;O75928 B4DGW0 200 212 PIAS2 E3 SUMO-protein ligase PIAS2 yes no 2 0.017456 65.627 By matching By MS/MS 1 1 1445400 592790 852630 375 48 407 902;903 784 784 3220 1 CLGPPTTPGPYR QAPCPRERCLGPPTTP PTTPGPYRSIYFSSPK R C L Y R S 0 1 0 0 1 0 0 2 0 0 1 0 0 0 4 0 2 0 1 0 0 0 12 0 1314.6391 A2IDA3;P29372 A2IDA3 44 55 MPG DNA-3-methyladenine glycosylase yes no 2 0.004306 82.645 By MS/MS By matching 1 1 2753000 1111900 1641100 376 321 408 904;905 785 785 3320 1 CLPGVLASPELR LPSYLQDRCLPGVLAS VLASPELRSYPYAFSV R C L L R S 1 1 0 0 1 0 1 1 0 0 3 0 0 0 2 1 0 0 0 1 0 0 12 0 1310.7017 A0A075B6Q3;Q5H9F3 A0A075B6Q3 89 100 BCORL1 BCL-6 corepressor-like protein 1 yes no 2 0.013521 58.433 By MS/MS By matching 1 1 1756600 1014400 742130 377 7 409 906;907 786 786 7 1 CLQMGMNRKAIR CQYCRLLKCLQMGMNR GMNRKAIREDGMPGGR K C L I R E 1 2 1 0 1 1 0 1 0 1 1 1 2 0 0 0 0 0 0 0 0 0 12 2 1476.7476 C9JDI9;Q15406 C9JDI9 78 89 NR6A1 Nuclear receptor subfamily 6 group A member 1 yes no 2 0.022161 46.891 By MS/MS 1 2204400 0 2204400 378 459 410 908 787 787 66 1 CLSPDDSTVK ALGEAEERCLSPDDST SPDDSTVKMASPPPSG R C L V K M 0 0 0 2 1 0 0 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 10 0 1120.507 E9PGC8;P78559 E9PGC8 1222 1231 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.0021569 93.442 By MS/MS By MS/MS 1 1 2487800 1180500 1307300 379 633 411 909;910 788;789 789 853 1 CLSYGGTSQLR HPPSPPKRCLSYGGTS YGGTSQLRVPEEPAAE R C L L R V 0 1 0 0 1 1 0 2 0 0 2 0 0 0 0 2 1 0 1 0 0 0 11 0 1240.587 H0Y894;O95382 H0Y894 686 696 MAP3K6 Mitogen-activated protein kinase kinase kinase 6 yes no 2 0.019591 56.087 By MS/MS By matching 1 1 1115300 611720 503570 380 850 412 911;912 790 790 1146 1 CLVAGLLSPR LIPDGYNRCLVAGLLS VAGLLSPRFVDVQPSS R C L P R F 1 1 0 0 1 0 0 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 10 0 1084.6063 Q8WYP5 Q8WYP5 521 530 AHCTF1 Protein ELYS yes yes 2 0.0019136 89.629 By MS/MS By MS/MS 2 1 1695300 811860 883400 381 1845 413 913;914;915 791;792;793;794;795 791 2595 5 CNLAMTQNYEGQLQSLK QKLDSLEKCNLAMTQN EGQLQSLKAQVRKLII K C N L K A 1 0 2 0 1 3 1 1 0 0 3 1 1 0 0 1 1 0 1 0 0 0 17 0 1996.9346 E9PMP4;E9PPB2;A0A0A0MTD8;A0A088AWP1;E9PIY2;A0A087WVI3;Q05D60 E9PMP4 81 97 CCDC67 Deuterosome protein 1 yes no 2 0.02129 41.54 By MS/MS 1 0 0 0 382 53 414 916 796 796 10 71;3224;4006 1 CQSLTEDLEFR LKVDLENRCQSLTEDL LTEDLEFRKSMYEEEI R C Q F R K 0 1 0 1 1 1 2 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 11 0 1396.6293 P20700;A0A0D9SFE5;E9PBF6 P20700 198 208 LMNB1 Lamin-B1 yes no 2 0.0097755 62.088 By MS/MS By matching 1 1 897480 478650 418830 383 1300 415 917;918 797 797 1707 1 CRSPGMLEPLGSSR MSPTPLDRCRSPGMLE LEPLGSSRTPMSVLQQ R C R S R T 0 2 0 0 1 0 1 2 0 0 2 0 1 0 2 3 0 0 0 0 0 0 14 1 1545.7392 Q9UQ35 Q9UQ35 2130 2143 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.00025867 88.092 By MS/MS By MS/MS 2 2 12984000 6894700 6089500 384 2134 416;417 919;920;921;922 798;799;800;801 798 306 3069 4 CSATPSAQVKPIVSASPPSR VIEMSSSRCSATPSAQ VSASPPSRAVAGSRSS R C S S R A 3 1 0 0 1 1 0 0 0 1 0 1 0 0 4 5 1 0 0 2 0 0 20 1 2039.047 Q96EV2;H0Y3K4 Q96EV2 726 745 RBM33 RNA-binding protein 33 yes no 3 0.007169 50.432 By MS/MS By MS/MS 1 1 4054500 2101400 1953100 385 1889 418 923;924 802;803 803 2666;2667 2 CSDNSSYEEPLSPISASSSTSR HSQEDSSRCSDNSSYE SASSSTSRRRQGQRDL R C S S R R 1 1 1 1 1 0 2 0 0 1 1 0 0 0 2 9 1 0 1 0 0 0 22 0 2360.0074 B3KPJ4;A0A0A0MSI2;Q8IXK0 B3KPJ4 346 367 PHC2 Polyhomeotic-like protein 2 yes no 3 0.012693 44.641 By matching By MS/MS 1 1 4829900 2372900 2457000 386 160 419 925;926 804 804 217 1 CSGPGLSPGMVR VTDASKVKCSGPGLSP GLSPGMVRANLPQSFQ K C S V R A 0 1 0 0 1 0 0 3 0 0 1 0 1 0 2 2 0 0 0 1 0 0 12 0 1216.5693 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 1453 1464 FLNA Filamin-A yes no 2 1.2282E-08 119.17 By MS/MS By MS/MS 3 3 33596000 15196000 18401000 387 1302 420;421 927;928;929;930;931;932 805;806;807;808;809 806 171 1712 4 CSGSEPSSSEK ASGVEPGRCSGSEPSS SEPSSSEKKKVSKAPS R C S E K K 0 0 0 0 1 0 2 1 0 0 0 1 0 0 1 5 0 0 0 0 0 0 11 0 1153.4557 F8W0I9;F8VVA6;F8VP44;F8W126;Q96EZ8 F8W0I9 88 98 MCRS1 Microspherule protein 1 yes no 2 0.018463 46.88 By MS/MS 1 0 0 0 388 729 422 933 810 810 967;968;969;970 1 CSPVPGLSSSPSGSPLHGK LTSKQGGRCSPVPGLS SGSPLHGKLNSQDSYN R C S G K L 0 0 0 0 1 0 0 3 1 0 2 1 0 0 4 6 0 0 0 1 0 0 19 0 1849.8992 K7ESE9;Q9H6U6 K7ESE9 250 268 BCAS3 Breast carcinoma-amplified sequence 3 yes no 2 0.010521 52.576 By matching By MS/MS 1 1 1236800 683720 553030 389 1055 423 934;935 811 811 1393 1 CSSPVDTECSHAEGSR CCSESGPRCSSPVDTE CSHAEGSRSQGPEKAF R C S S R S 1 1 0 1 2 0 2 1 1 0 0 0 0 0 1 4 1 0 0 1 0 0 16 0 1777.6996 A0A0A0MSJ8;T1ECW5;O75170 A0A0A0MSJ8 372 387 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 3 0.01383 46.926 By matching By MS/MS 1 1 2454100 1365800 1088300 390 163 424 936;937 812 812 221 1 CSTGSPSKDVTK FTSLYKDRCSTGSPSK SPSKDVTKSSSSGARE R C S T K S 0 0 0 1 1 0 0 1 0 0 0 2 0 0 1 3 2 0 0 1 0 0 12 1 1265.5922 H0Y2V6;Q5SW79 H0Y2V6 931 942 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0066598 63.292 By MS/MS By matching 1 1 2248100 867830 1380300 391 815 425 938;939 813 813 1085 0 CSTSSLLEACTFR KAVGNLRKCSTSSLLE LLEACTFRRP______ K C S F R R 1 1 0 0 2 0 1 0 0 0 2 0 0 1 0 3 2 0 0 0 0 0 13 0 1530.6807 P02787 P02787 684 696 TF Serotransferrin yes yes 2 0.0092133 63.408 By MS/MS 1 233730 233730 0 392 1213 426 940 814 814 1 CSVSLSNVEAR YRRQNPSRCSVSLSNV SLSNVEARRFFNKEFL R C S A R R 1 1 1 0 1 0 1 0 0 0 1 0 0 0 0 3 0 0 0 2 0 0 11 0 1220.5819 P47712 P47712 726 736 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 2 0.0021707 85.973 By matching By MS/MS 1 1 4296600 1916000 2380600 393 1371 427 941;942 815 815 1817 1 CVMNNYFGIGLDAK SVDGYSEKCVMNNYFG FGIGLDAKISLEFNNK K C V A K I 1 0 2 1 1 0 0 2 0 1 1 1 1 1 0 0 0 0 1 1 0 0 14 0 1600.7378 A0A0D9SFR6;Q16760;Q86XP1;Q5KSL6 A0A0D9SFR6 633 646 DGKH;DGKD;DGKK Diacylglycerol kinase delta;Diacylglycerol kinase eta;Diacylglycerol kinase kappa yes no 2 0.0051483 51.268 By MS/MS 1 1419200 0 1419200 394 235 428 943 816 816 38;39 35 1 CVSVQTDPTDEIPTK KEGSRKSRCVSVQTDP PTDEIPTKKSKKHKKH R C V T K K 0 0 0 2 1 1 1 0 0 1 0 1 0 0 2 1 3 0 0 2 0 0 15 0 1688.7927 P18583 P18583 92 106 SON Protein SON yes yes 2 4.1138E-07 101.42 By MS/MS By matching 1 1 2627200 1255900 1371300 395 1288 429 944;945 817 817 1689 1 CVSVQTDPTDEIPTKK KEGSRKSRCVSVQTDP TDEIPTKKSKKHKKHK R C V K K S 0 0 0 2 1 1 1 0 0 1 0 2 0 0 2 1 3 0 0 2 0 0 16 1 1816.8877 P18583 P18583 92 107 SON Protein SON yes yes 2 0.0057274 65.511 By MS/MS By matching 1 1 5143200 3499000 1644200 396 1288 430 946;947 818 818 1689 1 CYGGSFAQR EANLVPPKCYGGSFAQ YGGSFAQRNLCNDDGG K C Y Q R N 1 1 0 0 1 1 0 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 9 0 1044.4447 P42684 P42684 717 725 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0097583 61.679 By MS/MS By matching 1 1 1605100 747510 857590 397 1358 431 948;949 819 819 4294 1 DACAGDSGGPMVTLNRER AGEKEGGKDACAGDSG MVTLNRERGQWYLVGT K D A E R G 2 2 1 2 1 0 1 3 0 0 1 0 1 0 1 1 1 0 0 1 0 0 18 1 1904.8469 P48740 P48740 640 657 MASP1 Mannan-binding lectin serine protease 1;Mannan-binding lectin serine protease 1 heavy chain;Mannan-binding lectin serine protease 1 light chain yes yes 2 0.021691 43.382 By MS/MS By matching 1 1 744400 353490 390900 398 1375 432 950;951 820 820 195 1835 1 DAEYIYPSLESDDDDPALK DSLGACFKDAEYIYPS DDDDPALKSRPKKKKN K D A L K S 2 0 0 5 0 0 2 0 0 1 2 1 0 0 2 2 0 0 2 0 0 0 19 0 2154.9481 H0Y3N9;Q9UPP1;H0Y589 H0Y3N9 715 733 PHF8 Histone lysine demethylase PHF8 yes no 2 0.02166 52.344 By MS/MS By matching 1 1 1528100 629970 898160 399 819 433 952;953 821 821 1100;1101 1 DAFLGSFLYEYSR CKNYQEAKDAFLGSFL SFLYEYSRRHPEYAVS K D A S R R 1 1 0 1 0 0 1 1 0 0 2 0 0 2 0 2 0 0 2 0 0 0 13 0 1566.7355 CON__P02769 CON__P02769 347 359 yes yes 2 2.3703E-05 105.2 By MS/MS 1 2718900 0 2718900 + 400 503 434 954 822 822 1 DAGGPRPESPVPAGR ________________ ESPVPAGRASLEEPPD R D A G R A 2 2 0 1 0 0 1 3 0 0 0 0 0 0 4 1 0 0 0 1 0 0 15 1 1461.7324 E9PS47;E9PLE4;Q9BVG9 E9PS47 8 22 PTDSS2 Phosphatidylserine synthase 2 yes no 3 6.6972E-05 82.774 By MS/MS By MS/MS 1 1 7437700 3715000 3722700 401 663 435 955;956 823;824 823 897 2 DAGTIAGLNVLR AYLGKATKDAGTIAGL IAGLNVLRIINEPTAA K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1198.667 E9PKE3;P11142;E9PN89;E9PI65;E9PQQ4;E9PQK7;E9PK54;E9PLF4 E9PKE3 141 152 HSPA8 Heat shock cognate 71 kDa protein yes no 2 0.001627 94.692 By MS/MS By MS/MS 1 1 2055400 587710 1467600 402 654 436 957;958 825;826;827 827 3 DALGDSLQVPVSPSSTTSSR GHSPSQPRDALGDSLQ PSSTTSSRCSSRDGEF R D A S R C 1 1 0 2 0 1 0 1 0 0 2 0 0 0 2 6 2 0 0 2 0 0 20 0 2002.9807 Q9Y2D5;C9JVY5 Q9Y2D5 141 160 AKAP2 A-kinase anchor protein 2 yes no 2 0.0023568 72.681 By MS/MS By MS/MS 1 1 16149000 8233800 7915200 403 2142 437 959;960 828;829 828 3105;3106 2 DAPISPASIASSSSTPSSK DKTRLLKKDAPISPAS SSSTPSSKSKELSLNE K D A S K S 3 0 0 1 0 0 0 0 0 2 0 1 0 0 3 8 1 0 0 0 0 0 19 0 1788.8741 Q04727;H0Y5S0;H7C4E4 Q04727 288 306 TLE4 Transducin-like enhancer protein 4 yes no 2 0.0046537 64.104 By MS/MS By MS/MS 1 1 8356900 3812200 4544700 404 1463 438 961;962 830;831 830 1965 2 DAPTSPASVASSSSTPSSK DKARSLKKDAPTSPAS SSSTPSSKTKDLGHND K D A S K T 3 0 0 1 0 0 0 0 0 0 0 1 0 0 3 8 2 0 0 1 0 0 19 0 1762.8221 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 282 300 TLE3 Transducin-like enhancer protein 3 yes no 2 1.092E-39 134.4 By MS/MS By MS/MS 1 1 27618000 15187000 12430000 405 722 439 963;964 832;833;834 834 957 3 DASDDLDDLNFFNQK DEEDTRKKDASDDLDD DLNFFNQKKKKKKTKK K D A Q K K 1 0 2 5 0 1 0 0 0 0 2 1 0 2 0 1 0 0 0 0 0 0 15 0 1755.7588 P20042 P20042 65 79 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 2 0.010641 57.149 By MS/MS 1 1255900 0 1255900 406 1298 440 965 835 835 1 DASGVTFTWTPSSGK TCTLTGLRDASGVTFT TWTPSSGKSAVQGPPE R D A G K S 1 0 0 1 0 0 0 2 0 0 0 1 0 1 1 3 3 1 0 1 0 0 15 0 1539.7205 P01876 P01876 154 168 IGHA1 Ig alpha-1 chain C region yes yes 2 0.0019907 71.153 By MS/MS By matching 1 1 1337400 700290 637150 407 1210 441 966;967 836 836 1 DASIVGFFDDSFSEAHSEFLK FKKFISDKDASIVGFF EAHSEFLKAASNLRDN K D A L K A 2 0 0 3 0 0 2 1 1 1 1 1 0 4 0 4 0 0 0 1 0 0 21 0 2347.0645 P30101 P30101 153 173 PDIA3 Protein disulfide-isomerase A3 yes yes 3 2.9559E-24 155.28 By MS/MS 1 0 0 0 408 1328 442 968 837 837 1 DASSQDCYDIPR VDLNKLRKDASSQDCY QDCYDIPRAFPSDRSS K D A P R A 1 1 0 3 1 1 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 12 0 1425.5831 B7Z3B9;Q13480 B7Z3B9 296 307 GAB1 GRB2-associated-binding protein 1 yes no 2 0.005763 59.426 By MS/MS By MS/MS 1 1 7646200 3922400 3723800 409 406 443 969;970 838;839 838 4098 2 DASSSPASTASSASSTSLK DKNRLLKKDASSSPAS SASSTSLKSKEMSLHE K D A L K S 4 0 0 1 0 0 0 0 0 0 1 1 0 0 1 9 2 0 0 0 0 0 19 0 1740.8014 Q04724 Q04724 282 300 TLE1 Transducin-like enhancer protein 1 yes yes 2 2.674E-15 108.3 By MS/MS By MS/MS 1 1 9795000 4686800 5108200 410 1462 444 971;972 840;841 841 1963;1964 2 DATNVGDEGGFAPNILENK VIKEKYGKDATNVGDE APNILENKEGLELLKT K D A N K E 2 0 3 2 0 0 2 3 0 1 1 1 0 1 1 0 1 0 0 1 0 0 19 0 1959.9174 P06733 P06733 203 221 ENO1 Alpha-enolase yes yes 2;3 6.8625E-84 161.25 By MS/MS By MS/MS 2 1 20287000 9941400 10346000 411 1227 445 973;974;975 842;843;844;845;846 846 5 DDDDIDLFGSDDEEESEEAKR GSGATDSKDDDDIDLF EESEEAKRLREERLAQ K D D K R L 1 1 0 7 0 0 5 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 21 1 2427.9674 P24534;C9JZW3 P24534 97 117 EEF1B2 Elongation factor 1-beta yes no 3 0.00054132 72.968 By matching By MS/MS 1 1 16810000 3879300 12930000 412 1309 446 976;977 847 847 1720 1 DDINLLPSKSSVTK RYHLRSKKDDINLLPS PSKSSVTKICRDPQTP K D D T K I 0 0 1 2 0 0 0 0 0 1 2 2 0 0 1 3 1 0 0 1 0 0 14 1 1515.8144 Q9ULW0 Q9ULW0 349 362 TPX2 Targeting protein for Xklp2 yes yes 2 0.015714 42.718 By MS/MS 1 703600 703600 0 413 2123 447 978 848 848 319 3042;3043;3044 0 DDKHGSYEDAVHSGALND IKLHPESKDDKHGSYE VHSGALND________ K D D N D - 2 0 1 4 0 0 1 2 2 0 1 1 0 0 0 2 0 0 1 1 0 0 18 1 1928.8137 F5H282;E7EQR6;P17987 F5H282 315 332 TCP1 T-complex protein 1 subunit alpha yes no 3 0.0024731 61.821 By matching By MS/MS 1 1 7637300 3482900 4154400 414 575 448 979;980 849 849 763 1 DDLQGAQSEIEAKQEIQHLR LAKVSLLKDDLQGAQS KQEIQHLRKELIEAQE K D D L R K 2 1 0 2 0 4 3 1 1 2 2 1 0 0 0 1 0 0 0 0 0 0 20 1 2307.1455 C9JA20;B7Z964;H7C3M8;H7BZK0;Q14BN4 C9JA20 18 37 SLMAP Sarcolemmal membrane-associated protein yes no 3 0.0046747 49.559 By MS/MS By matching 1 1 4225100 2095500 2129600 415 412 449 981;982 850 850 363;364;365 577 1 DDTSRYDERPGPSPLPHR VNIRHSGRDDTSRYDE GPSPLPHRDRDRDRER R D D H R D 0 3 0 3 0 0 1 1 1 0 1 0 0 0 4 2 1 0 1 0 0 0 18 2 2093.9879 P08621 P08621 214 231 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 4 0.018143 48.216 By matching By MS/MS 1 1 7010800 2572200 4438600 416 1241 450 983;984 851 851 1640 1 DEDMLYSPELAQR LDLPPRRRDEDMLYSP YSPELAQRGHDDDVSS R D E Q R G 1 1 0 2 0 1 2 0 0 0 2 0 1 0 1 1 0 0 1 0 0 0 13 0 1565.7032 Q9Y2W2 Q9Y2W2 231 243 WBP11 WW domain-binding protein 11 yes yes 2 0.013821 65.043 By matching By MS/MS 1 1 1144100 578850 565210 417 2147 451 985;986 852 852 314 3121 1 DEILPTTPISEQK HVSIVEPKDEILPTTP TTPISEQKGG______ K D E Q K G 0 0 0 1 0 1 2 0 0 2 1 1 0 0 2 1 2 0 0 0 0 0 13 0 1469.7613 E9PSF4;E9PPU1;H0YEU2;E9PL09;P23396 E9PSF4 89 101 RPS3 40S ribosomal protein S3 yes no 2 6.8477E-22 145.61 By MS/MS By MS/MS 2 2 124680000 57783000 66896000 418 660 452;453 987;988;989;990 853;854;855 853 3448;3449 3 DEKYWTRR VFVPDEQKDEKYWTRR DEKYWTRRKKNNVAAK K D E R R K 0 2 0 1 0 0 1 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 8 2 1152.5676 Q10587 Q10587 233 240 TEF Thyrotroph embryonic factor yes yes 2 0.011698 61.962 By MS/MS 1 6571600 6571600 0 419 1476 454 991 856 856 4335 1 DELILEGNDIELVSNSAALIQQATTVK RPVSQAQKDELILEGN IQQATTVKNKDIRKFL K D E V K N 3 0 2 2 0 2 3 1 0 3 4 1 0 0 0 2 2 0 0 2 0 0 27 0 2883.5077 D6RAN4;H0Y9V9;P32969;H0Y9R4 D6RAN4 137 163 RPL9 60S ribosomal protein L9 yes no 3 2.8813E-07 86.18 By MS/MS By MS/MS 1 1 13359000 7819400 5540100 420 525 455 992;993 857;858 858 2 DETNYGIPQR IIMWKLTRDETNYGIP TNYGIPQRAPPRGDLW R D E Q R A 0 1 1 1 0 1 1 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 10 0 1191.552 D6RGK8;D6R909;D6RAU2;E9PD14;D6RBD0;D6RFX4;D6RFZ9;D6RHH4;D6R9Z1;D6RAC2;D6R9L0;D6REE5;P63244 D6RGK8 48 57 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 8.2651E-05 121.09 By MS/MS By MS/MS 1 1 2154000 654810 1499200 421 519 456 994;995 859;860 860 2 DFADIPNLR KIKKLTAKDFADIPNL FADIPNLRRLDFTGNL K D F L R R 1 1 1 2 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 9 0 1059.5349 P20774;Q5TBF5 P20774 138 146 OGN Mimecan yes no 2 0.012544 75.854 By MS/MS 1 305840 305840 0 422 1301 457 996 861 861 1 DFNIKLSDFGFSKR CENLLLDKDFNIKLSD SDFGFSKRCLRDSNGR K D F K R C 0 1 1 2 0 0 0 1 0 1 1 2 0 3 0 2 0 0 0 0 0 0 14 2 1672.8573 Q96PF2 Q96PF2 147 160 TSSK2 Testis-specific serine/threonine-protein kinase 2 yes yes 2 0.016414 51.286 By MS/MS By matching 1 1 1232300 587290 644970 423 1917 458 997;998 862 862 269 2712;2713 0 DFQDYMEPEEGCQGSPQRR ELERKFVKDFQDYMEP CQGSPQRRGPLTSGSD K D F R R G 0 2 0 2 1 3 3 2 0 0 0 0 1 1 2 1 0 0 1 0 0 0 19 1 2327.9535 O43237;H3BUM4;B4E2E0 O43237 180 198 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 3 0.0031779 49.049 By MS/MS 1 3012400 3012400 0 424 1116 459 999 863 863 134 1485 1 DFQEYVEPGEDFPASPQR NVLLLVIRDFQEYVEP DFPASPQRRNTASQED R D F Q R R 1 1 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 18 0 2109.928 E9PHI6;Q9Y6G9;C9JGM7 E9PHI6 77 94 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 0.0018057 86.213 By MS/MS By MS/MS 1 1 3937200 2019100 1918100 425 635 460 1000;1001 864;865 865 860 2 DFQEYVEPGEDFPASPQRR NVLLLVIRDFQEYVEP FPASPQRRNTASQEDK R D F R R N 1 2 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 19 1 2266.0291 E9PHI6;Q9Y6G9;C9JGM7 E9PHI6 77 95 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 3 0.00073827 73.597 By MS/MS By MS/MS 1 1 30839000 13749000 17090000 426 635 461 1002;1003 866;867 866 860 2 DFQHLISSPLKK TRRKKRKKDFQHLISS LISSPLKKSRICDETA K D F K K S 0 0 0 1 0 1 0 0 1 1 2 2 0 1 1 2 0 0 0 0 0 0 12 1 1411.7823 Q15361 Q15361 58 69 TTF1 Transcription termination factor 1 yes yes 3 0.020435 41.48 By matching By MS/MS 1 1 1055000 512190 542830 427 1551 462 1004;1005 868 868 2144 1 DGALESQDTENVPVTLSEENRSEGK QSSRPSLKDGALESQD EENRSEGKVGFQAYKN K D G G K V 1 1 2 2 0 1 5 2 0 0 2 1 0 0 1 3 2 0 0 2 0 0 25 1 2703.2471 O15439 O15439 671 695 ABCC4 Multidrug resistance-associated protein 4 yes yes 3 0.017579 41.76 By matching By MS/MS 1 1 1909200 964160 945040 428 1110 463 1006;1007 869 869 151 1 DGCSEEQLR KFYPKRYRDGCSEEQL GCSEEQLRQLCQRLST R D G L R Q 0 1 0 1 1 1 2 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 9 0 1092.4506 Q8IVE3 Q8IVE3 1306 1314 PLEKHH2 Pleckstrin homology domain-containing family H member 2 yes yes 1 0.020708 40.103 By MS/MS By matching 1 1 51252000 26328000 24924000 429 1749 464 1008;1009 870 870 2462 0 DGDDVIIIGVFK KQVQEFLKDGDDVIII VIIIGVFKGESDPAYQ K D G F K G 0 0 0 3 0 0 0 2 0 3 0 1 0 1 0 0 0 0 0 2 0 0 12 0 1289.6867 P13667 P13667 302 313 PDIA4 Protein disulfide-isomerase A4 yes yes 2 2.2402E-11 109.66 By MS/MS By MS/MS 1 1 522410 0 522410 430 1270 465 1010;1011 871;872 871 2 DGEEYEWKETAR EMDELCYRDGEEYEWK YEWKETARWLKFEEDV R D G A R W 1 1 0 1 0 0 4 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 12 1 1511.6529 C9JRP1;A0A0A0MST8;E9PFN4;Q9Y6M7 C9JRP1 123 134 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 yes no 2 0.0075678 66.92 By MS/MS By matching 1 1 4594000 2194300 2399600 431 476 466 1012;1013 873 873 4113 1 DGEQSPNVSLMQR RPESERERDGEQSPNV PNVSLMQRMSDMLSRW R D G Q R M 0 1 1 1 0 2 1 1 0 0 1 0 1 0 1 2 0 0 0 1 0 0 13 0 1459.6725 F2Z305;Q58WW2 F2Z305 332 344 DCAF6 DDB1- and CUL4-associated factor 6 yes no 2 0.015515 63.181 By matching By MS/MS 1 1 4310900 2089600 2221300 432 693 467 1014;1015 874 874 81 931 1 DGGQTESNEEGKENR KKGVSGQKDGGQTESN NEEGKENRDRDRDYSR K D G N R D 0 1 2 1 0 1 4 3 0 0 0 1 0 0 0 1 1 0 0 0 0 0 15 1 1648.6925 F8W726;Q14157;Q5VU81;Q5VU80;Q5VU79;Q5VU78;Q5VU77 F8W726 110 124 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.015986 54.09 By MS/MS By matching 1 1 1468300 583990 884330 433 754 468 1016;1017 875 875 1 DGGSGNSTIIVSR LIDELLERDGGSGNST NSTIIVSRSGEDESQE R D G S R S 0 1 1 1 0 0 0 3 0 2 0 0 0 0 0 3 1 0 0 1 0 0 13 0 1261.6262 Q7Z6Z7 Q7Z6Z7 2359 2371 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.00061446 91.712 By matching By MS/MS 1 1 3308500 1646600 1661900 434 1721 469 1018;1019 876 876 2423 1 DGKFSPIQEK ENMVVPSRDGKFSPIQ KFSPIQEKSPKQALSS R D G E K S 0 0 0 1 0 1 1 1 0 1 0 2 0 1 1 1 0 0 0 0 0 0 10 1 1147.5873 O43683 O43683 651 660 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 2 0.01506 77.633 By MS/MS By matching 1 1 3865900 1845200 2020700 435 1126 470 1020;1021 877 877 1499 1 DGLNDDDFEPYLSPQAR QNGSVHQKDGLNDDDF PYLSPQARPNNAYTAM K D G A R P 1 1 1 4 0 1 1 1 0 0 2 0 0 1 2 1 0 0 1 0 0 0 17 0 1950.8595 S4R3J8;Q9Y5A9 S4R3J8 27 43 YTHDF2 YTH domain-containing family protein 2 yes no 2 0.0017154 75.463 By MS/MS By MS/MS 1 1 4838900 2027000 2812000 436 2165 471 1022;1023 878;879 879 3142 2 DGLNQTTIPVSPPSTTKPSR IEDSSVQKDGLNQTTI PSTTKPSRASTASPCN K D G S R A 0 1 1 1 0 1 0 1 0 1 1 1 0 0 4 3 4 0 0 1 0 0 20 1 2095.0909 Q71RC2;X6RLN4 Q71RC2 573 592 LARP4 La-related protein 4 yes no 3 0.002394 80.316 By MS/MS By MS/MS 1 1 5789400 2542400 3247000 437 1700 472 1024;1025 880;881;882 882 2373 3 DGNSCNVGSPFAKDFLPK WFFKLPHKDGNSCNVG FAKDFLPKMEDGTLQA K D G P K M 1 0 2 2 1 0 0 2 0 0 1 2 0 2 2 2 0 0 0 1 0 0 18 1 1951.9098 H0YCD2;H0YDF1;A0A1B0GVT8;A0A1B0GTU7;P54098 H0YCD2 9 26 POLG DNA polymerase subunit gamma-1 yes no 3 0.020183 41.088 By MS/MS 1 0 0 0 438 289 473 1026 883 883 49;50 1 DGQDAIAQSPEKESK DSEASKPKDGQDAIAQ QSPEKESKDYEMNANH K D G S K D 2 0 0 2 0 2 2 1 0 1 0 2 0 0 1 2 0 0 0 0 0 0 15 1 1601.7533 Q9NWH9;H0YL55;H7BXE3 Q9NWH9 281 295 SLTM SAFB-like transcription modulator yes no 2;3 3.7589E-29 144.08 By MS/MS By MS/MS 2 2 9346000 4700800 4645200 439 2064 474 1027;1028;1029;1030 884;885;886 886 2951 3 DGQVINETSQHHDDLE LIKTVETRDGQVINET SQHHDDLE________ R D G L E - 0 0 1 3 0 2 2 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 16 0 1835.7922 P08670 P08670 451 466 VIM Vimentin yes yes 2;3 3.2471E-06 99.539 By MS/MS By MS/MS 3 3 41051000 21006000 20045000 440 1243 475;476 1031;1032;1033;1034;1035;1036 887;888;889;890 889 1642 4 DGSLASNPYSGDLTK PTTPLTGRDGSLASNP PYSGDLTKFGRGDASS R D G T K F 1 0 1 2 0 0 0 2 0 0 2 1 0 0 1 3 1 0 1 0 0 0 15 0 1523.7104 F8W726;Q14157;H0Y5H6;H7C2T8 F8W726 861 875 UBAP2L Ubiquitin-associated protein 2-like yes no 2 0.0079106 51.841 By MS/MS By matching 1 1 1953300 913760 1039500 441 754 477 1037;1038 891 891 4166 1 DGSLNQSSGYR ATKLTEERDGSLNQSS LNQSSGYRYGTDPTPQ R D G Y R Y 0 1 1 1 0 1 0 2 0 0 1 0 0 0 0 3 0 0 1 0 0 0 11 0 1182.5265 P06241;E5RJX7;E5RHX7;E5RFM6;E5RK23;E5RFM4;E5RHF7;E5RGM6;E5RI25;E5RFM0;E5RGT0;E5RH71;E5RIX5;E5RFS5 P06241 19 29 FYN Tyrosine-protein kinase Fyn yes no 2 0.0025396 84.188 By MS/MS By MS/MS 2 2 3550400 1811200 1739300 442 1224 478 1039;1040;1041;1042 892;893 893 1615 2 DGSSPPLLEK KTAVQDRKDGSSPPLL SSPPLLEKQTVTKDVT K D G E K Q 0 0 0 1 0 0 1 1 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 0 1041.5342 H7BYY2;Q6W2J9 H7BYY2 420 429 BCOR BCL-6 corepressor yes no 2 0.0021428 99.752 By MS/MS By MS/MS 1 1 7530500 3427800 4102700 443 944 479 1043;1044 894;895 894 1271;1272 2 DGTHVLQGLSSR WRLRCKAKDGTHVLQG VLQGLSSRTRVRELQG K D G S R T 0 1 0 1 0 1 0 2 1 0 2 0 0 0 0 2 1 0 0 1 0 0 12 0 1268.6473 Q5VVQ6 Q5VVQ6 55 66 YOD1 Ubiquitin thioesterase OTU1 yes yes 2 0.019003 52.79 By MS/MS By matching 1 1 1019400 427250 592190 444 1651 480 1045;1046 896 896 2309 0 DGWHSWPIAHQWPQGPSAVDAAFSWEEK YWRLDTSRDGWHSWPI AAFSWEEKLYLVQGTQ R D G E K L 4 0 0 2 0 2 2 2 2 1 0 1 0 1 3 3 0 4 0 1 0 0 28 0 3218.4635 P02790 P02790 290 317 HPX Hemopexin yes yes 4 4.0284E-07 68.771 By MS/MS By MS/MS 1 1 11127000 5071200 6056000 445 1214 481 1047;1048 897;898;899 897 3 DHSPTPSVFNSDEER TRERERERDHSPTPSV VFNSDEERYRYREYAE R D H E R Y 0 1 1 2 0 0 2 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 15 0 1715.7387 Q6UN15 Q6UN15 490 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 3 1.6292E-15 121.99 By MS/MS By MS/MS 1 1 9546000 5031200 4514800 446 1690 482 1049;1050 900;901 900 2364;2365;3820 2 DHTVSGDEDYCPR YRFNHHCKDHTVSGDE GDEDYCPRSKKANLGK K D H P R S 0 1 0 3 1 0 1 1 1 0 0 0 0 0 1 1 1 0 1 1 0 0 13 0 1549.6103 Q9UIG0 Q9UIG0 943 955 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.00057453 85.536 By MS/MS By MS/MS 1 1 2603200 1382600 1220600 447 2100 483 1051;1052 902;903 903 3007 2 DIDEVSSLLR CCSAKNLRDIDEVSSL DEVSSLLRTSIMSKQY R D I L R T 0 1 0 2 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1145.5928 H7C4C8;P50990 H7C4C8 148 157 CCT8 T-complex protein 1 subunit theta yes no 2 0.009621 68.371 By MS/MS By MS/MS 1 1 601850 305720 296130 448 967 484 1053;1054 904;905 904 2 DIDISSPEFK VTGREGAKDIDISSPE DISSPEFKIKIPRHEL K D I F K I 0 0 0 2 0 0 1 0 0 2 0 1 0 1 1 2 0 0 0 0 0 0 10 0 1149.5554 Q09666 Q09666 172 181 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0060154 77.64 By MS/MS By MS/MS 1 1 2750000 1236200 1513800 449 1474 485 1055;1056 906;907 906 1991;1992 2 DIDNNLITSTPR SKRSRIERDIDNNLIT NLITSTPRAGEKPNKQ R D I P R A 0 1 2 2 0 0 0 0 0 2 1 0 0 0 1 1 2 0 0 0 0 0 12 0 1357.6838 H0YMH7;Q05D32;H0YNU2;H0YNW9 H0YMH7 77 88 CTDSPL2 CTD small phosphatase-like protein 2 yes no 2 0.0058041 78.287 By matching By MS/MS 1 1 1744300 608540 1135700 450 898 486 1057;1058 908 908 3529 1 DIEQVPQQPTYVQALFDFDPQEDGELGFR RNQQIFLRDIEQVPQQ EDGELGFRRGDFIHVM R D I F R R 1 1 0 4 0 5 3 2 0 1 2 0 0 3 3 0 1 0 1 2 0 0 29 0 3380.5837 P62993 P62993 150 178 GRB2 Growth factor receptor-bound protein 2 yes yes 3 1.8551E-06 73.361 By MS/MS By matching 1 1 27370000 14477000 12893000 451 1436 487 1059;1060 909 909 1 DIEVLSEDTDYEEDEVTKK KSPERLRKDIEVLSED EEDEVTKKRKDVKKDT K D I K K R 0 0 0 4 0 0 5 0 0 1 1 2 0 0 0 1 2 0 1 2 0 0 19 1 2256.0169 H0Y7Y8;H7C5R6;Q4LE39 H0Y7Y8 185 203 ARID4B AT-rich interactive domain-containing protein 4B yes no 2;3 0.0074014 80.609 By MS/MS By MS/MS 2 2 9208100 4765100 4443000 452 846 488 1061;1062;1063;1064 910;911 911 1140;3511 2 DIIPTQMQRLTK LCRRLQLKDIIPTQMQ TQMQRLTKYPLLLDNI K D I T K Y 0 1 0 1 0 2 0 0 0 2 1 1 1 0 1 0 2 0 0 0 0 0 12 1 1442.7915 Q9NZN5;E9PMR6 Q9NZN5 928 939 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2 0.020349 41.448 By MS/MS By matching 1 1 640690 357450 283230 453 2080 489 1065;1066 912 912 302 3947;3948 0 DIIRQPSEEEIIK IPSAKKYKDIIRQPSE PSEEEIIKLAPPPKKA K D I I K L 0 1 0 1 0 1 3 0 0 4 0 1 0 0 1 1 0 0 0 0 0 0 13 1 1568.841 B1AKZ5;Q15121 B1AKZ5 88 100 PEA15 Astrocytic phosphoprotein PEA-15 yes no 2;3 1.0986E-15 131.61 By MS/MS By MS/MS 2 2 63111000 46993000 16118000 454 359 490 1067;1068;1069;1070 913;914;915;916 916 526 4 DIKEESDEEEEDDEESGRLR METLELQKDIKEESDE DEESGRLRFKTERKEG K D I L R F 0 2 0 4 0 0 8 1 0 1 1 1 0 0 0 2 0 0 0 0 0 0 20 2 2408.0099 Q96EV2;H7BXM6;A8MTF7;H7C0H2 Q96EV2 200 219 RBM33 RNA-binding protein 33 yes no 3 0.0048442 78.166 By matching By MS/MS 1 1 49429000 16625000 32803000 455 1889 491 1071;1072 917 917 2668 1 DILIVVGNEIIEAPMAWR GLYSAMPRDILIVVGN IEAPMAWRSRFFEYRA R D I W R S 2 1 1 1 0 0 2 1 0 4 1 0 1 0 1 0 0 1 0 2 0 0 18 0 2038.0921 H0YMX4;P50440 H0YMX4 97 114 GATM Glycine amidinotransferase, mitochondrial yes no 2;3 4.978E-09 104.17 By MS/MS By MS/MS 2 2 91353000 52947000 38406000 456 899 492 1073;1074;1075;1076 918;919;920;921 921 107 4 DINSLYDVSR LERYNMERDINSLYDV NSLYDVSRMYVDPSEI R D I S R M 0 1 1 2 0 0 0 0 0 1 1 0 0 0 0 2 0 0 1 1 0 0 10 0 1180.5724 A0A0A0MRF9;P16885 A0A0A0MRF9 748 757 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 2 0.0018702 88.948 By MS/MS By MS/MS 1 1 4918600 2092400 2826200 457 139 493 1077;1078 922;923 923 187 2 DINTFVGTPVEK KAAVGEEKDINTFVGT FVGTPVEKLDLLGNLP K D I E K L 0 0 1 1 0 0 1 1 0 1 0 1 0 1 1 0 2 0 0 2 0 0 12 0 1318.6769 P46013 P46013 1916 1927 MKI67 Antigen KI-67 yes yes 2 0.0074027 74.853 By MS/MS By MS/MS 1 1 1851100 782960 1068100 458 1361 494 1079;1080 924;925 924 3688 2 DIRPSDITQITSTPTSSMLTIK SSWSKAGKDIRPSDIT TSSMLTIKYATRKDAG K D I I K Y 0 1 0 2 0 1 0 0 0 4 1 1 1 0 2 4 5 0 0 0 0 0 22 1 2404.2519 A0A0A0MTS7;Q8WZ42;A0A0A0MRA3 A0A0A0MTS7 22987 23008 TTN Titin yes no 3 0.0042469 50.425 By MS/MS By matching 1 1 16499000 7320900 9178600 459 186 495 1081;1082 926 926 348 25 260;261;262;3278;3279;3280 1 DISGPSPSKK FVCDINEKDISGPSPS SGPSPSKKLKKSQCTP K D I K K L 0 0 0 1 0 0 0 1 0 1 0 2 0 0 2 3 0 0 0 0 0 0 10 1 1014.5346 S4R3D6;Q96GX9 S4R3D6 35 44 APIP Methylthioribulose-1-phosphate dehydratase yes no 2 0.013497 73.273 By MS/MS 1 3240700 3240700 0 460 1895 496 1083 927 927 2674 1 DITDPLSLNTCTDEGHVVLASPLK PVEILIPKDITDPLSL VVLASPLKTGRKRHRH K D I L K T 1 0 1 3 1 0 1 1 1 1 4 1 0 0 2 2 3 0 0 2 0 0 24 0 2594.2898 Q7L2J0 Q7L2J0 234 257 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 3 0.010025 50.425 By MS/MS 1 788140 0 788140 461 1703 497 1084 928 928 3827;3828 1 DITTSADQIAEVK PGLELNKKDITTSADQ ADQIAEVKTMESHPPI K D I V K T 2 0 0 2 0 1 1 0 0 2 0 1 0 0 0 1 2 0 0 1 0 0 13 0 1389.6987 F5H527;Q76I76 F5H527 510 522 SSH2 Protein phosphatase Slingshot homolog 2 yes no 2 2.7922E-05 103.76 By MS/MS By MS/MS 1 1 2118200 901950 1216200 462 716 498 1085;1086 929;930 930 951;3473 2 DIVFLVDGSSALGLANFNAIR AVIEVNKRDIVFLVDG LANFNAIRDFIAKVIQ R D I I R D 3 1 2 2 0 0 0 2 0 2 3 0 0 2 0 2 0 0 0 2 0 0 21 0 2191.1637 E7ENL6;P12111;C9JNG9 E7ENL6 38 58 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0021893 85.271 By matching By MS/MS 1 1 5108900 2151900 2957000 463 567 499 1087;1088 931 931 1 DIYDLKDQIQDVEGR DTSLSELRDIYDLKDQ QIQDVEGRYMQGLKEL R D I G R Y 0 1 0 4 0 2 1 1 0 2 1 1 0 0 0 0 0 0 1 1 0 0 15 1 1805.8796 C9JSU1;Q9Y608 C9JSU1 114 128 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2 0.00041413 76.143 By matching By MS/MS 1 1 621490 300090 321400 464 479 500 1089;1090 932 932 4114 1 DIYETDYYR IGDFGMTRDIYETDYY IYETDYYRKGGKGLLP R D I Y R K 0 1 0 2 0 0 1 0 0 1 0 0 0 0 0 0 1 0 3 0 0 0 9 0 1236.5299 C9J5X1;P08069;P06213 C9J5X1 1158 1166 IGF1R;INSR Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Insulin receptor;Insulin receptor subunit alpha;Insulin receptor subunit beta yes no 2 0.0044749 85.29 By matching By MS/MS 3 3 4530900 1874100 2656800 465 445 501;502 1091;1092;1093;1094;1095;1096 933;934;935 933 3366;4105;4106;4107 3 DIYETDYYRK IGDFGMTRDIYETDYY YETDYYRKGGKGLLPV R D I R K G 0 1 0 2 0 0 1 0 0 1 0 1 0 0 0 0 1 0 3 0 0 0 10 1 1364.6248 C9J5X1;P08069;P06213 C9J5X1 1158 1167 IGF1R;INSR Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Insulin receptor;Insulin receptor subunit alpha;Insulin receptor subunit beta yes no 2 0.020051 55.567 By matching By MS/MS 1 1 1363900 654640 709230 466 445 503 1097;1098 936 936 3366;4105;4106;4107 1 DKAPVQPQQSPAAAPGGTDEKPSGK ________________ TDEKPSGKERRDAGDK R D K G K E 4 0 0 2 0 3 1 3 0 0 0 3 0 0 5 2 1 0 0 1 0 0 25 2 2460.2245 F8WBS8;C9JPC0;Q13200 F8WBS8 7 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 3 0.013168 49.176 By MS/MS By matching 1 1 8561500 3755800 4805700 467 473 504 1099;1100 937 937 661 1 DKASPEPEKDFSEK KADPGAVKDKASPEPE PEKDFSEKAKPSPHPI K D K E K A 1 0 0 2 0 0 3 0 0 0 0 3 0 1 2 2 0 0 0 0 0 0 14 2 1605.7522 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 592 605 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.0063354 65.949 By MS/MS 1 2609400 0 2609400 468 57 505 1101 938 938 74 1 DKESINITNSKHIQEEK LDKKEKSRDKESINIT SKHIQEEKKSSIVDGN R D K E K K 0 0 2 1 0 1 3 0 1 3 0 3 0 0 0 2 1 0 0 0 0 0 17 2 2012.0174 Q6UB98 Q6UB98 966 982 ANKRD12 Ankyrin repeat domain-containing protein 12 yes yes 3 0.019102 42.947 By MS/MS 1 8792900 8792900 0 469 1689 506 1102 939 939 228 2360;2361;3819 1 DKLNTQSTYSEA VDGVKLKKDKLNTQST TQSTYSEA________ K D K E A - 1 0 1 1 0 1 1 0 0 0 1 1 0 0 0 2 2 0 1 0 0 0 12 1 1355.6205 Q5JWQ2;Q5JWQ6;E9PEP6;O14786 Q5JWQ2 94 105 NRP1 Neuropilin-1 yes no 2 0.020633 56.043 By MS/MS By MS/MS 2 1 5501100 3126000 2375100 470 617 507 1103;1104;1105 940;941;942 942 4149 1 DKMSQMASVPER FPSHLLGKDKMSQMAS QMASVPEREPESAPSA K D K E R E 1 1 0 1 0 1 1 0 0 0 0 1 2 0 1 2 0 0 0 1 0 0 12 1 1377.6381 Q53QW1 Q53QW1 132 143 C2orf57 Uncharacterized protein C2orf57 yes yes 2 0.00081895 78.705 By MS/MS 1 0 0 0 471 1601 508 1106 943 943 424 229 2220 1 DKSDSPAIQLR REVLGIKRDKSDSPAI DSPAIQLRLKEPMDVD R D K L R L 1 1 0 2 0 1 0 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 11 1 1228.6412 Q96ST3 Q96ST3 936 946 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 4.2484E-05 118.87 By MS/MS By matching 1 1 3450800 1552900 1897900 472 1931 509 1107;1108 944 944 2731 1 DKSPVREPIDNLTPEER RSKSPFRKDKSPVREP DNLTPEERDARTVFCM K D K E R D 0 2 1 2 0 0 3 0 0 1 1 1 0 0 3 1 1 0 0 1 0 0 17 2 1994.0069 Q5QP22;Q5QP23;G3XAC6;Q14498;H0Y4X3 Q5QP22 134 150 RBM39 RNA-binding protein 39 yes no 3 0.00029136 93.551 By MS/MS By MS/MS 2 2 148980000 72079000 76899000 473 803 510 1109;1110;1111;1112 945;946;947;948 948 1065 4 DLAVPAALTPR YHTVCTPRDLAVPAAL VPAALTPRASPGHSPH R D L P R A 3 1 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 0 1 0 0 11 0 1122.6397 Q8TEM1 Q8TEM1 1836 1846 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 0.0051266 89.827 By MS/MS By MS/MS 1 1 9799000 4490700 5308300 474 1826 511 1113;1114 949;950 949 3865 2 DLDEEGSEKELHENVLDK FEENGLEKDLDEEGSE LHENVLDKELEENDSE K D L D K E 0 0 1 3 0 0 5 1 1 0 3 2 0 0 0 1 0 0 0 1 0 0 18 1 2097.9702 O43719 O43719 573 590 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.022299 43.37 By MS/MS 1 3147000 3147000 0 475 1127 512 1115 951 951 1500 0 DLDRPESQSPK LLLLKLSKDLDRPESQ RPESQSPKRPPEDFET K D L P K R 0 1 0 2 0 1 1 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 11 1 1270.6153 Q8WUA4;A0A087WZD8 Q8WUA4 159 169 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2 0.019549 65.809 By matching By MS/MS 1 1 8914500 4117500 4797000 476 1832 513 1116;1117 952 952 2580 1 DLDSQTMMVLVNYIFFK GKITDLIKDLDSQTMM LVNYIFFKAKWEMPFD K D L F K A 0 0 1 2 0 1 0 0 0 1 2 1 2 2 0 1 1 0 1 2 0 0 17 0 2063.0108 P01011;G3V595 P01011 198 214 SERPINA3 Alpha-1-antichymotrypsin;Alpha-1-antichymotrypsin His-Pro-less yes no 2 1.2615E-05 96.64 By MS/MS 1 14982000 14982000 0 477 1205 514 1118 953 953 141;142 1 DLEGSDIDTR NSEEYIRRDLEGSDID EGSDIDTRRRAACDLV R D L T R R 0 1 0 3 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1119.5044 P55060 P55060 373 382 CSE1L Exportin-2 yes yes 2 0.011505 66.568 By MS/MS By MS/MS 1 1 1129400 587190 542190 478 1412 515 1119;1120 954;955 954 2 DLEIEVVLFHPNYNINGK VSVGGEKRDLEIEVVL PNYNINGKKEAGIPEF R D L G K K 0 0 3 1 0 0 2 1 1 2 2 1 0 1 1 0 0 0 1 2 0 0 18 0 2113.0844 A0A0G2JH38;E7ETN3;B4E1Z4;P00751;H7C5H1 A0A0G2JH38 547 564 CFB Complement factor B;Complement factor B Ba fragment;Complement factor B Bb fragment yes no 2;3 1.9702E-29 139.66 By MS/MS By MS/MS 4 4 18631000 10285000 8346900 479 241 516;517 1121;1122;1123;1124;1125;1126;1127;1128 956;957;958;959;960;961;962 957 41;42;43 7 DLELALSPIHNSSALPTTGR ETKGFNKKDLELALSP SALPTTGRSCVNLAKK K D L G R S 2 1 1 1 0 0 1 1 1 1 4 0 0 0 2 3 2 0 0 0 0 0 20 0 2091.096 A0A087WUU7;Q96GX5 A0A087WUU7 36 55 MASTL Serine/threonine-protein kinase greatwall yes no 3 0.01254 46.027 By matching By MS/MS 1 1 1664600 908880 755740 480 44 518 1129;1130 963 963 59 1 DLERVTSYLQR SGIPLTSRDLERVTSY RVTSYLQRCGEQVDSV R D L Q R C 0 2 0 1 0 1 1 0 0 0 2 0 0 0 0 1 1 0 1 1 0 0 11 1 1378.7205 Q8NAA5 Q8NAA5 189 199 LRRC75A Leucine-rich repeat-containing protein 75A yes yes 3 0.019913 41.399 By MS/MS 1 0 0 0 481 1788 519 1131 964 964 2509;3857 1 DLEVVAATPTSLLISWDAPAVTVR STVSDVPRDLEVVAAT DAPAVTVRYYRITYGE R D L V R Y 4 1 0 2 0 0 1 0 0 1 3 0 0 0 2 2 3 1 0 4 0 0 24 0 2523.3585 P02751;H0Y7Z1 P02751 1453 1476 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 2;3 3.6714E-41 123.03 By MS/MS By MS/MS 3 2 72645000 43587000 29058000 482 1212 520 1132;1133;1134;1135;1136 965;966;967;968;969;970;971 967 7 DLFAFQESPPR GEKRQVRRDLFAFQES AFQESPPRFLPSHPIV R D L P R F 1 1 0 1 0 1 1 0 0 0 1 0 0 2 2 1 0 0 0 0 0 0 11 0 1305.6354 E7EX48;P51957 E7EX48 467 477 NEK4 Serine/threonine-protein kinase Nek4 yes no 2 0.019242 56.295 By matching By MS/MS 1 1 794960 388630 406330 483 605 521 1137;1138 972 972 835 1 DLFDLNSSEEDDTEGFSER DEDRKQFKDLFDLNSS DTEGFSERGILRPLST K D L E R G 0 1 1 4 0 0 4 1 0 0 2 0 0 2 0 3 1 0 0 0 0 0 19 0 2203.9029 Q9Y3T9 Q9Y3T9 666 684 NOC2L Nucleolar complex protein 2 homolog yes yes 2 1.5643E-17 94.728 By MS/MS By MS/MS 1 3 5888000 3032500 2855500 484 2156 522;523 1139;1140;1141;1142 973;974;975;976 975 3133;3134 4 DLFDYSPPLHK QVKSEKLKDLFDYSPP DYSPPLHKNLDAREKS K D L H K N 0 0 0 2 0 0 0 0 1 0 2 1 0 1 2 1 0 0 1 0 0 0 11 0 1330.6558 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 507 517 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 4.8539E-43 160.52 By MS/MS By MS/MS 2 2 19425000 7391700 12034000 485 2073 524 1143;1144;1145;1146 977;978;979;980;981;982;983 981 2968 7 DLFSLDSEDPSPASPPLR EQILRTGRDLFSLDSE SPASPPLRSSGSSLFP R D L L R S 1 1 0 3 0 0 1 0 0 0 3 0 0 1 4 4 0 0 0 0 0 0 18 0 1941.932 H3BTX0;Q9BTK6 H3BTX0 54 71 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes no 2;3 0.0021374 73.624 By MS/MS By MS/MS 2 2 45674000 23093000 22582000 486 934 525 1147;1148;1149;1150 984;985;986 984 1251 3 DLGHNDKSSTPGLK STPSSKTKDLGHNDKS KSSTPGLKSNTPTPRN K D L L K S 0 0 1 2 0 0 0 2 1 0 2 2 0 0 1 2 1 0 0 0 0 0 14 1 1467.7318 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 303 316 TLE3 Transducin-like enhancer protein 3 yes no 3 0.0088439 53.828 By MS/MS By MS/MS 1 1 2425600 1118400 1307200 487 722 526 1151;1152 987;988 988 958;959 2 DLIHDQDEDEEEEEGQR DNRVTSFRDLIHDQDE EEEEEGQRFYAGGSER R D L Q R F 0 1 0 4 0 2 6 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 17 0 2084.8407 F2Z2K0;Q9UNZ2;R4GNE6 F2Z2K0 77 93 NSFL1C NSFL1 cofactor p47 yes no 3 8.8923E-19 106.35 By matching By MS/MS 1 1 2462000 1131700 1330200 488 688 527 1153;1154 989 989 1 DLLHPSPEEEKR ________________ PSPEEEKRKHKKKRLV K D L K R K 0 1 0 1 0 0 3 0 1 0 2 1 0 0 2 1 0 0 0 0 0 0 12 1 1448.726 P42677;Q5T4L4 P42677 6 17 RPS27 40S ribosomal protein S27 yes no 3 0.020096 47.606 By MS/MS By matching 1 1 2117500 1108900 1008600 489 1356 528 1155;1156 990 990 1777 0 DLLHPSPEEEKRK ________________ SPEEEKRKHKKKRLVQ K D L R K H 0 1 0 1 0 0 3 0 1 0 2 2 0 0 2 1 0 0 0 0 0 0 13 2 1576.8209 P42677;Q5T4L4 P42677 6 18 RPS27 40S ribosomal protein S27 yes no 3 0.0006806 95.401 By matching By MS/MS 1 1 3392700 1781300 1611400 490 1356 529 1157;1158 991 991 1777 1 DLLIAYYDVDYEK NKDLIQGKDLLIAYYD YYDVDYEKNAKGSNYW K D L E K N 1 0 0 3 0 0 1 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 13 0 1618.7767 P30101 P30101 259 271 PDIA3 Protein disulfide-isomerase A3 yes yes 2 0.0004454 97.214 By MS/MS By MS/MS 1 1 13164000 5982400 7181700 491 1328 530 1159;1160 992;993;994 993 3 DLLSDLQDISDSER KEEKMEERDLLSDLQD QDISDSERKTSSAESS R D L E R K 0 1 0 4 0 1 1 0 0 1 3 0 0 0 0 3 0 0 0 0 0 0 14 0 1604.753 Q5QPR4;J3QR29;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127;J3KS35;E7ESP2 Q5QPR4 225 238 CDK11A;CDK11B;CDC2L1 Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B yes no 2 0.011867 55.755 By matching By MS/MS 1 1 2640800 1134100 1506700 492 223 531 1161;1162 995 995 320 1 DLMTQLRQVLESRLQR YPQVPDEKDLMTQLRQ VLESRLQRPLPEDLAE K D L Q R P 0 3 0 1 0 3 1 0 0 0 4 0 1 0 0 1 1 0 0 1 0 0 16 2 1985.084 H7C5D9;C9JYK0;O75427 H7C5D9 64 79 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 yes no 2 0.021678 41.412 By MS/MS 1 0 0 0 493 491 532 1163 996 996 58 678;3377 1 DLNYCFSGMSDHR FGSDRFGRDLNYCFSG FSGMSDHRYGDGGSTF R D L H R Y 0 1 1 2 1 0 0 1 1 0 1 0 1 1 0 2 0 0 1 0 0 0 13 0 1600.6399 E9PCY7;G8JLB6;P55795;P31943;H0YBG7;H0YBD7;H0YB39 E9PCY7 263 275 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 2 0.0071575 55.452 By matching By MS/MS 1 1 1128200 486340 641860 494 613 533 1164;1165 997 997 4148 1 DLPDGHAASPR KPDFVQVKDLPDGHAA DGHAASPRGTEASPPQ K D L P R G 2 1 0 2 0 0 0 1 1 0 1 0 0 0 2 1 0 0 0 0 0 0 11 0 1134.5418 Q9P1Y5 Q9P1Y5 326 336 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.010661 61.419 By MS/MS By MS/MS 1 1 7893200 3435400 4457800 495 2085 534 1166;1167 998;999 998 2991 2 DLPSADSVQYR LYHEHLRKDLPSADSV SADSVQYRHLPSRGIT K D L Y R H 1 1 0 2 0 1 0 0 0 0 1 0 0 0 1 2 0 0 1 1 0 0 11 0 1249.5939 Q92621 Q92621 572 582 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.0015557 80.755 By MS/MS By MS/MS 1 1 4737400 2069600 2667900 496 1854 535 1168;1169 1000;1001 1001 4407 2 DLQAICGISCDELSSMVLELR DYIGHKTKDLQAICGI SSMVLELRGLRTIVTT K D L L R G 1 1 0 2 2 1 2 1 0 2 4 0 1 0 0 3 0 0 0 1 0 0 21 0 2408.1386 CON__Q28194;P07996 CON__Q28194 265 285 THBS1 Thrombospondin-1 yes no 3 0.0066724 45.885 By matching By MS/MS 1 1 5306000 2693200 2612800 + 497 508 536 1170;1171 1002 1002 60 1 DLQFVEVTDVK SDTVPSPRDLQFVEVT FVEVTDVKVTIMWTPP R D L V K V 0 0 0 2 0 1 1 0 0 0 1 1 0 1 0 0 1 0 0 3 0 0 11 0 1291.666 P02751 P02751 912 922 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 2.444E-05 113.93 By MS/MS By MS/MS 1 1 1538900 925710 613210 498 1212 537 1172;1173 1003;1004 1004 2 DLQVSETAETSLTLLWK ATELDTPKDLQVSETA TSLTLLWKTPLAKFDR K D L W K T 1 0 0 1 0 1 2 0 0 0 4 1 0 0 0 2 3 1 0 1 0 0 17 0 1933.0044 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 990 1006 TNC Tenascin yes no 2;3 1.7978E-25 106.31 By MS/MS By MS/MS 7 10 47594000 23469000 24125000 499 723 538 1174;1175;1176;1177;1178;1179;1180;1181;1182;1183;1184;1185;1186;1187;1188;1189;1190 1005;1006;1007;1008;1009;1010;1011;1012;1013;1014;1015;1016 1009 12 DLSLEEIQK PLSPPKKKDLSLEEIQ LSLEEIQKKLEAAEER K D L Q K K 0 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1073.5605 E5RGX5;Q93045;A2A2D0;P16949 A2A2D0 44 52 STMN2;STMN1 Stathmin;Stathmin-2 no no 2 0.0010535 95.483 By MS/MS By MS/MS 1 1 5039100 2489100 2550000 500 312;550 539 1191;1192 1017;1018 1017 447 2 DLSPPRYDSLVQSQAR HNLQNKFRDLSPPRYD SLVQSQARELSLQRQQ R D L A R E 1 2 0 2 0 2 0 0 0 0 2 0 0 0 2 3 0 0 1 1 0 0 16 1 1830.9224 Q5JTU8;B1AMJ5;A0A0A0MRG9;Q96SN8 Q5JTU8 246 261 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes no 3 0.018601 45.347 By MS/MS By matching 1 1 783260 421870 361400 501 140 540 1193;1194 1019 1019 188 1 DLSTSPKPSPIPSPVLGR ENTVSAGKDLSTSPKP IPSPVLGRKPNASQSL K D L G R K 0 1 0 1 0 0 0 1 0 1 2 1 0 0 5 4 1 0 0 1 0 0 18 1 1847.0153 Q8NDI1 Q8NDI1 424 441 EHBP1 EH domain-binding protein 1 yes yes 3 0.0094529 48.729 By MS/MS 1 512820 0 512820 502 1799 541 1195 1020 1020 2527 1 DLTHSDSESSLHMSDR QHGLGSQRDLTHSDSE SSLHMSDRQRVAPKPP R D L D R Q 0 1 0 3 0 0 1 0 2 0 2 0 1 0 0 5 1 0 0 0 0 0 16 0 1815.7694 H0YDB2;E9PNJ4;Q13586 H0YDB2 277 292 STIM1 Stromal interaction molecule 1 yes no 3 0.0009078 71.316 By MS/MS By MS/MS 1 1 7019200 3884100 3135100 503 671 542 1196;1197 1021;1022 1021 907 2 DLTYQVVLGEYNLAVK TAGHCISRDLTYQVVL GEYNLAVKEGPEQVIP R D L V K E 1 0 1 1 0 1 1 1 0 0 3 1 0 0 0 0 1 0 2 3 0 0 16 0 1823.9669 B1AQ52;P09093 B1AQ52 78 93 CELA3A Chymotrypsin-like elastase family member 3A yes no 2 0.00097971 87.216 By MS/MS By MS/MS 1 1 4858800 3276900 1581800 504 362 543 1198;1199 1023;1024 1023 2 DLVQPDKPASPK SGHLMQTRDLVQPDKP PDKPASPKFIVTLDGV R D L P K F 1 0 0 2 0 1 0 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 12 1 1293.6929 G3V4R5;G3V411;H0YJA2;Q6PJT7 G3V4R5 183 194 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 2;3 0.00084291 87.083 By MS/MS By MS/MS 2 2 53051000 29007000 24044000 505 796 544 1200;1201;1202;1203 1025;1026;1027;1028 1026 1056 4 DLVSFPLSPAVR ________________ FPLSPAVRVKLVSAGF R D L V R V 1 1 0 1 0 0 0 0 0 0 2 0 0 1 2 2 0 0 0 2 0 0 12 0 1299.7187 J3QLB5;E9PI66;Q7KZJ0;J3QKK3;O43502 J3QLB5 7 18 RAD51C DNA repair protein RAD51 homolog 3 yes no 2 0.020205 53.869 By MS/MS 1 428080 0 428080 506 638 545 1204 1029 1029 868 0 DLVVTEVTEETVNLAWDNEMR CSEVSPPKDLVVTEVT LAWDNEMRVTEYLVVY K D L M R V 1 1 2 2 0 0 4 0 0 0 2 0 1 0 0 0 3 1 0 4 0 0 21 0 2462.1635 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 628 648 TNC Tenascin yes no 3 0.0015137 59.857 By MS/MS By MS/MS 1 1 7538900 4450400 3088500 507 723 546 1205;1206 1030;1031 1031 85 2 DLYLASVFHATAFELDTDGNPFDQDIYGR LSRMSGKKDLYLASVF FDQDIYGREELRSPKL K D L G R E 3 1 1 5 0 1 1 2 1 1 3 0 0 3 1 1 2 0 2 1 0 0 29 0 3289.5204 E9PKH2;P50454 E9PKH2 128 156 SERPINH1 Serpin H1 yes no 3 0.0033893 48.337 By matching By MS/MS 1 1 14646000 4465500 10180000 508 656 547 1207;1208 1032 1032 1 DMAIATGGAVFGEEGLTLNLEDVQPHDLGK DNRKNQLKDMAIATGG VQPHDLGKVGEVIVTK K D M G K V 3 0 1 3 0 1 3 5 1 1 4 1 1 1 1 0 2 0 0 2 0 0 30 0 3096.5074 P10809 P10809 315 344 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 4.4638E-14 90.37 By MS/MS By MS/MS 1 1 30275000 16376000 13900000 509 1253 548 1209;1210 1033;1034 1033 156 2 DMESPTKLDVTLAK KTEVALAKDMESPTKL KLDVTLAKDMQPSMES K D M A K D 1 0 0 2 0 0 1 0 0 0 2 2 1 0 1 1 2 0 0 1 0 0 14 1 1546.7913 E7EVA0;P27816;H7C456 E7EVA0 294 307 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 1.2934E-105 182.91 By MS/MS By MS/MS 5 5 217710000 98273000 119440000 510 596 549;550 1211;1212;1213;1214;1215;1216;1217;1218;1219;1220 1035;1036;1037;1038;1039;1040;1041;1042;1043 1041 72 812;3424 9 DMQPLSPISVHER TDSGSLRRDMQPLSPI SPISVHERYSSPTAGS R D M E R Y 0 1 0 1 0 1 1 0 1 1 1 0 1 0 2 2 0 0 0 1 0 0 13 0 1507.7453 P28749 P28749 635 647 RBL1 Retinoblastoma-like protein 1 yes yes 2 0.00059395 85.909 By MS/MS By MS/MS 1 1 4252300 1336900 2915400 511 1321 551 1221;1222 1044;1045 1045 1738 2 DMSDESLPVLENSRDR D M D R 0 2 1 3 0 0 2 0 0 0 2 0 1 0 1 3 0 0 0 1 0 0 16 1 1861.8476 REV__P19878 yes yes 3 0.0092944 50.843 By MS/MS 1 581150 581150 0 + 512 2205 552 1223 1046 1046 3192 1 DNLTLWTSDQQDDDGGEGNN TLIMQLLRDNLTLWTS DDGGEGNN________ R D N N N - 0 0 3 5 0 2 1 3 0 0 2 0 0 0 0 1 2 1 0 0 0 0 20 0 2192.873 P61981 P61981 228 247 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 5.5312E-07 100.22 By MS/MS By matching 1 1 25950000 9949000 16001000 513 1424 553 1224;1225 1047 1047 1 DNNITTGKIYQHVINK FLDINLYKDNNITTGK IYQHVINKERRGDYLG K D N N K E 0 0 3 1 0 1 0 1 1 3 0 2 0 0 0 0 2 0 1 1 0 0 16 1 1856.9745 Q9NRF8 Q9NRF8 85 100 CTPS2 CTP synthase 2 yes yes 2 0.012365 40.983 By MS/MS 1 10322000 0 10322000 514 2047 554 1226 1048 1048 299;300 3939 1 DNTFFRESPVGR RERSPYKRDNTFFRES FRESPVGRKDSPHSRS R D N G R K 0 2 1 1 0 0 1 1 0 0 0 0 0 2 1 1 1 0 0 1 0 0 12 1 1423.6844 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8;F8VPY7;F8VWU8 F8WF16 78 89 PPHLN1 Periphilin-1 yes no 3 0.00078358 88.075 By MS/MS By MS/MS 1 1 12301000 6977800 5323400 515 411 555 1227;1228 1049;1050 1049 575 2 DPAQPMSPGEATQSGARPADR ________________ SGARPADRYGLLKHSR R D P D R Y 4 2 0 2 0 2 1 2 0 0 0 0 1 0 4 2 1 0 0 0 0 0 21 1 2137.9811 Q9BQG0 Q9BQG0 5 25 MYBBP1A Myb-binding protein 1A yes yes 3 0.0086219 48.376 By matching By MS/MS 1 1 12067000 5856400 6210200 516 1952 556 1229;1230 1051 1051 2764 1 DPMSYALNHTNR APSKAVSKDPMSYALN YALNHTNRKLTLEPKI K D P N R K 1 1 2 1 0 0 0 0 1 0 1 0 1 0 1 1 1 0 1 0 0 0 12 0 1417.6408 H0Y3Y7;Q8NHU2 H0Y3Y7 183 194 CFAP61 Cilia- and flagella-associated protein 61 yes no 2 0.011218 46.592 By matching By MS/MS 1 1 1897000 726870 1170100 517 820 557 1231;1232 1052 1052 124 101 1104 1 DPQNCALSALTLCEK LALQCAMKDPQNCALS SALTLCEKDHIAFETA K D P E K D 2 0 1 1 2 1 1 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 15 0 1718.7968 Q9HCJ5 Q9HCJ5 991 1005 ZSWIM6 Zinc finger SWIM domain-containing protein 6 yes yes 2 0.019944 43.419 By MS/MS 1 0 0 0 518 2031 558 1233 1053 1053 296 2901;3936 1 DQDLFVQNCAALSSGAFWFR QKFSTFDRDQDLFVQN SSGAFWFRSCHFANLN R D Q F R S 3 1 1 2 1 2 0 1 0 0 2 0 0 3 0 2 0 1 0 1 0 0 20 0 2331.0743 K7ES70;P55083 K7ES70 216 235 MFAP4 Microfibril-associated glycoprotein 4 yes no 2 1.3981E-06 99.069 By MS/MS By MS/MS 1 1 17123000 10981000 6142000 519 1054 559 1234;1235 1054;1055 1054 2 DQEPKPSPEPAAVSR GGGELDKKDQEPKPSP PEPAAVSRGGGGEPGA K D Q S R G 2 1 0 1 0 1 2 0 0 0 0 1 0 0 4 2 0 0 0 1 0 0 15 1 1606.7951 Q9H7S9 Q9H7S9 246 260 ZNF703 Zinc finger protein 703 yes yes 2;3 0.00013195 78.78 By MS/MS By MS/MS 2 2 33836000 15625000 18211000 520 2019 560 1236;1237;1238;1239 1056;1057;1058 1058 2887 3 DQEWYDAEIAR TPSRMAHRDQEWYDAE WYDAEIARKLQEEELL R D Q A R K 2 1 0 2 0 1 2 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 11 0 1394.6103 Q8IVM0 Q8IVM0 170 180 CCDC50 Coiled-coil domain-containing protein 50 yes yes 2 0.010327 58.63 By MS/MS 1 0 0 0 521 1751 561 1240 1059 1059 4391 1 DQFFSELQEIQRTSTPR HMSTLKERDQFFSELQ IQRTSTPRPDWTKCKD R D Q P R P 0 2 0 1 0 3 2 0 0 1 1 0 0 2 1 2 2 0 0 0 0 0 17 1 2081.0178 J3KQF4;E7ENJ7;B4DXD0;Q2TAA8 J3KQF4 175 191 TSNAXIP1 Translin-associated factor X-interacting protein 1 yes no 2 0.010531 48.883 By MS/MS 1 1572500 0 1572500 522 386 562 1241 1060 1060 359;360 547;3344 1 DQFNLIVFSTEATQWR ILDDLSPRDQFNLIVF STEATQWRPSLVPASA R D Q W R P 1 1 1 1 0 2 1 0 0 1 1 0 0 2 0 1 2 1 0 1 0 0 16 0 1953.9585 H7C0L5;B7ZKJ8;Q14624 H7C0L5 166 181 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 0.00067839 73.927 By MS/MS 1 0 0 0 523 415 563 1242 1061 1061 1 DQTPDENDQVIVK AAEVVVPRDQTPDEND ENDQVIVKIIGHFYAS R D Q V K I 0 0 1 3 0 2 1 0 0 1 0 1 0 0 1 0 1 0 0 2 0 0 13 0 1499.7104 Q9NZI8 Q9NZI8 526 538 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.017751 64.64 By matching By MS/MS 1 1 3436500 1479800 1956700 524 2077 564 1243;1244 1062 1062 0 DQVANSAFVER YYITGETKDQVANSAF ANSAFVERLRKHGLEV K D Q E R L 2 1 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1234.5942 P07900 P07900 500 510 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.011371 81.525 By matching By MS/MS 1 1 4799500 1884100 2915400 525 1234 565 1245;1246 1063 1063 1 DRGVTRFQENASEGK KRDGKEKKDRGVTRFQ QENASEGKAPAEDVFK K D R G K A 1 2 1 1 0 1 2 2 0 0 0 1 0 1 0 1 1 0 0 1 0 0 15 2 1692.818 E9PGM9;P78332;C9JII0 E9PGM9 725 739 RBM6 RNA-binding protein 6 yes no 2 0.0028884 67.93 By MS/MS By matching 1 1 1604700 801840 802870 526 634 566 1247;1248 1064 1064 95 857 0 DRNSWGGFSEK ________________ SWGGFSEKTYEWSSEE R D R E K T 0 1 1 1 0 0 1 2 0 0 0 1 0 1 0 2 0 1 0 0 0 0 11 1 1281.5738 G3V321;G3V5T4;Q8WXF7 G3V321 7 17 ATL1 Atlastin-1 yes no 2 3.952E-05 115.12 By MS/MS By matching 1 1 2251300 1071400 1179900 527 787 567 1249;1250 1065 1065 1046 1 DRPAMQLYQPGAR KRDRIRNKDRPAMQLY QLYQPGARSRNRLCPP K D R A R S 2 2 0 1 0 2 0 1 0 0 1 0 1 0 2 0 0 0 1 0 0 0 13 1 1501.746 A0A1B0GVA2;Q9BZI7 A0A1B0GVA2 60 72 UPF3B Regulator of nonsense transcripts 3B yes no 3 0.0022569 71.241 By matching By MS/MS 1 1 1783300 861410 921860 528 298 568 1251;1252 1066 1066 4059 1 DRSSPPPGYIPDELHQVAR SIIGPTSRDRSSPPPG DELHQVARNGSFTSIN R D R A R N 1 2 0 2 0 1 1 1 1 1 1 0 0 0 4 2 0 0 1 1 0 0 19 1 2133.0603 Q9Y2U5 Q9Y2U5 161 179 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 yes yes 3 0.0039219 56.684 By matching By MS/MS 1 1 3898600 2059300 1839300 529 2145 569 1253;1254 1067 1067 3111;3112 1 DRTPPLLYR PDPLRGARDRTPPLLY RTPPLLYRDRDRDLYP R D R Y R D 0 2 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 1 0 0 0 9 1 1129.6244 A0A087WWP4;Q96T37 A0A087WWP4 522 530 RBM15 Putative RNA-binding protein 15 yes no 2 0.0071962 114.76 By MS/MS By MS/MS 1 1 25933000 11367000 14566000 530 67 570 1255;1256 1068;1069 1068 3229 2 DSAIPVESDTDDEGAPR RKNVNIYRDSAIPVES TDDEGAPRISLAEMLE R D S P R I 2 1 0 4 0 0 2 1 0 1 0 0 0 0 2 2 1 0 0 1 0 0 17 0 1772.7701 C9JA08;Q96D46 C9JA08 461 477 NMD3 60S ribosomal export protein NMD3 yes no 2 3.9153E-05 95.236 By MS/MS By MS/MS 1 1 12009000 5120000 6889100 531 451 571 1257;1258 1070;1071 1070 642;3369 2 DSAYQSITHYRPVSASR RERPMYGRDSAYQSIT YRPVSASRSSLDLSYY R D S S R S 2 2 0 1 0 1 0 0 1 1 0 0 0 0 1 4 1 0 2 1 0 0 17 1 1936.9391 P50402;Q5HY57 P50402 158 174 EMD Emerin yes no 3 0.00048725 81.632 By MS/MS By MS/MS 2 3 20144000 9068400 11075000 532 1389 572;573 1259;1260;1261;1262;1263 1072;1073;1074 1074 4314;4315 3 DSDAGSSTPTTSTR KSSRKRKRDSDAGSST STPTTSTRSRDKDDES R D S T R S 1 1 0 2 0 0 0 1 0 0 0 0 0 0 1 4 4 0 0 0 0 0 14 0 1381.5957 K7EP28;Q9HBD4;A0A0A0MT49;P51532 K7EP28 109 122 SMARCA4 Transcription activator BRG1 yes no 2 0.014664 54.199 By MS/MS By matching 1 1 1338000 737420 600550 533 173 574 1264;1265 1075 1075 240;3274 1 DSDYVYPSLESDEDNPIFK DHLDACFKDSDYVYPS DEDNPIFKSRSKKRKG K D S F K S 0 0 1 4 0 0 2 0 0 1 1 1 0 1 2 3 0 0 2 1 0 0 19 0 2231.9746 E7ET14;A0A087WW48;O75151 E7ET14 85 103 PHF2 Lysine-specific demethylase PHF2 yes no 2 0.013081 50.467 By MS/MS By matching 1 1 13162000 6848500 6313000 534 61 575 1266;1267 1076 1076 79 1 DSENLASPSEYPENGER NLFSPVNRDSENLASP EYPENGERFSFLSKPV R D S E R F 1 1 2 1 0 0 4 1 0 0 1 0 0 0 2 3 0 0 1 0 0 0 17 0 1892.8024 P52948 P52948 617 633 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 2;3 7.7787E-14 112.57 By MS/MS By MS/MS 3 3 47702000 23024000 24679000 535 1402 576;577 1268;1269;1270;1271;1272;1273 1077;1078;1079;1080;1081 1081 201 1889;1890 5 DSFSHSPGAVSSLK LSRSDVFRDSFSHSPG PGAVSSLKVFTGLAAP R D S L K V 1 0 0 1 0 0 0 1 1 0 1 1 0 1 1 5 0 0 0 1 0 0 14 0 1417.6838 Q9H6R7 Q9H6R7 685 698 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes yes 2;3 2.8008E-05 99.669 By MS/MS By MS/MS 2 2 15404000 7670300 7733500 536 2011 578 1274;1275;1276;1277 1082;1083;1084 1082 2877 3 DSGRGDSVSDSGSDALR RLRKNSSRDSGRGDSV DSGSDALRSGLTVPTS R D S L R S 1 2 0 4 0 0 0 3 0 0 1 0 0 0 0 5 0 0 0 1 0 0 17 1 1679.7347 Q53EL6;Q5VZS7 Q53EL6 70 86 PDCD4 Programmed cell death protein 4 yes no 3 0.00058207 89.659 By MS/MS By MS/MS 1 1 6658000 3031000 3627000 537 1593 579 1278;1279 1085;1086 1085 2209 2 DSGSISLQETR SSFLSKTKDSGSISLQ SISLQETRRQKKTLKK K D S T R R 0 1 0 1 0 1 1 1 0 1 1 0 0 0 0 3 1 0 0 0 0 0 11 0 1191.5731 Q9H2G2 Q9H2G2 776 786 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0017787 89.189 By MS/MS By MS/MS 1 1 6240600 2602600 3638000 538 1997 580 1280;1281 1087;1088 1088 2854 2 DSHSSEEDEASSQTDLSQTISK VMTRRGLRDSHSSEED DLSQTISKKTVRSIQE R D S S K K 1 0 0 3 0 2 3 0 1 1 1 1 0 0 0 7 2 0 0 0 0 0 22 0 2380.015 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 32 53 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.00062651 64.522 By MS/MS By matching 1 1 4838200 4627600 210590 539 164 581 1282;1283 1089 1089 223;224 1 DSHSSEEDEASSQTDLSQTISKK VMTRRGLRDSHSSEED LSQTISKKTVRSIQEA R D S K K T 1 0 0 3 0 2 3 0 1 1 1 2 0 0 0 7 2 0 0 0 0 0 23 1 2508.11 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 32 54 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.011551 44.759 By matching By MS/MS 1 1 20696000 9624700 11071000 540 164 582 1284;1285 1090 1090 223;224 1 DSITTWEILAVSMSDK KLMNIFLKDSITTWEI LAVSMSDKKGICVADP K D S D K K 1 0 0 2 0 0 1 0 0 2 1 1 1 0 0 3 2 1 0 1 0 0 16 0 1794.871 P01024 P01024 797 812 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha chain;Complement C3c alpha chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha chain fragment 2 yes yes 2 0.013377 62.258 By MS/MS By MS/MS 1 1 3223500 1745100 1478500 + 541 1207 583 1286;1287 1091;1092 1092 143 2 DSMSAAEVGTGQYATTK ENHEIYMKDSMSAAEV TGQYATTKGISQTNLI K D S T K G 3 0 0 1 0 1 1 2 0 0 0 1 1 0 0 2 3 0 1 1 0 0 17 0 1715.7672 A0A0J9YW26;A0A1B0GTF8;A8K968;A0A0A0MRA8;A0A0A0MSA4;J3KT37 A0A0J9YW26 23 39 EPB41L3 yes no 2 4.0315E-138 188.48 By MS/MS By MS/MS 2 2 12704000 5987300 6716600 542 134 584;585 1288;1289;1290;1291 1093;1094;1095 1094 20 3251;3252;4023 2 DSNAPKSPLTGYVR RKRKKPLRDSNAPKSP SPLTGYVRFMNERREQ R D S V R F 1 1 1 1 0 0 0 1 0 0 1 1 0 0 2 2 1 0 1 1 0 0 14 1 1503.7682 H0YNS8;H0YKM5;Q9NP66 H0YNS8 99 112 HMG20A High mobility group protein 20A yes no 2;3 0.0014284 74.783 By MS/MS By MS/MS 2 2 14779000 6123400 8655200 543 892 586 1292;1293;1294;1295 1096;1097;1098 1098 1198 3 DSQDASAEQSDHDDEVASLASASGGFGTK PYHLLQQRDSQDASAE ASGGFGTKVPAPRLPA R D S T K V 5 0 0 5 0 2 2 3 1 0 1 1 0 1 0 6 1 0 0 1 0 0 29 0 2881.2122 Q6P2E9 Q6P2E9 870 898 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 3 6.9554E-07 78.942 By matching By MS/MS 1 1 30711000 14776000 15936000 544 1677 587 1296;1297 1099 1099 2346 1 DSSDSADGRATPSENLVPSSAR IPPRAHSRDSSDSADG NLVPSSARVDKPPSVL R D S A R V 3 2 1 3 0 0 1 1 0 0 1 0 0 0 2 6 1 0 0 1 0 0 22 1 2218.0098 F5H6M0;F5H047;F5H669;Q8N684 F5H6M0 184 205 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 3 0.0052342 80.303 By matching By MS/MS 1 1 9745300 5813200 3932200 545 709 588 1298;1299 1100 1100 3469 1 DSSFTEVPRSPK STFSFSGRDSSFTEVP TEVPRSPKHAHSSSLQ R D S P K H 0 1 0 1 0 0 1 0 0 0 0 1 0 1 2 3 1 0 0 1 0 0 12 1 1348.6623 O95425 O95425 236 247 SVIL Supervillin yes yes 3 0.0043443 63.754 By MS/MS By MS/MS 1 1 989130 626210 362920 546 1193 589 1300;1301 1101;1102 1102 1593 2 DSSSVIQFMSR ________________ SVIQFMSRAKVKVDPA K D S S R A 0 1 0 1 0 1 0 0 0 1 0 0 1 1 0 4 0 0 0 1 0 0 11 0 1255.5867 H7C2L1;Q13797 H7C2L1 4 14 ITGA9 Integrin alpha-9 yes no 2 0.012036 60.598 By MS/MS By matching 1 1 1604700 671440 933270 547 960 590 1302;1303 1103 1103 1290 1 DSSTCPGDYVLSVSENSR RHGMFLVRDSSTCPGD LSVSENSRVSHYIINS R D S S R V 0 1 1 2 1 0 1 1 0 0 1 0 0 0 1 5 1 0 1 2 0 0 18 0 1971.848 P46109 P46109 40 57 CRKL Crk-like protein yes yes 2 0.0052663 59.227 By MS/MS 1 585150 0 585150 548 1365 591 1304 1104 1104 1803 1 DSWEDIFELLFWGR EHFAMMQRDSWEDIFE FELLFWGRTSAGTRQP R D S G R T 0 1 0 2 0 0 2 1 0 1 2 0 0 2 0 1 0 2 0 0 0 0 14 0 1811.8519 P04004 P04004 311 324 VTN Vitronectin;Vitronectin V65 subunit;Vitronectin V10 subunit;Somatomedin-B yes yes 2 5.0089E-13 118.73 By MS/MS By matching 1 1 3009500 2599700 409800 549 1215 592 1305;1306 1105 1105 1612 1 DSYVGDEAQSK VMVGMGQKDSYVGDEA VGDEAQSKRGILTLKY K D S S K R 1 0 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 11 0 1197.515 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;P68133;P68032;C9JUM1;C9JZR7;A6NL76;P63267;P62736;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 51 61 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 2 0.0023361 89.029 By MS/MS By MS/MS 2 2 7361500 2710200 4651200 550 1422 593 1307;1308;1309;1310 1106;1107;1108;1109 1108 4 DSYVGDEAQSKR VMVGMGQKDSYVGDEA GDEAQSKRGILTLKYP K D S K R G 1 1 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 12 1 1353.6161 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;P68133;P68032;C9JUM1;C9JZR7;A6NL76;P63267;P62736;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 51 62 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 3 0.0039638 72.34 By MS/MS 1 804310 0 804310 551 1422 594 1311 1110 1110 1 DTASLSTTPSESPR RGVQVLPRDTASLSTT TTPSESPRAQATSRLS R D T P R A 1 1 0 1 0 0 1 0 0 0 1 0 0 0 2 4 3 0 0 0 0 0 14 0 1447.6791 H0YJ30;G3V582;F5H039;Q9NQX3 H0YJ30 192 205 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 2 5.4985E-06 101.39 By MS/MS By matching 1 1 2313600 1081100 1232500 552 708 595 1312;1313 1111 1111 945 1 DTDGGPKEEESPV AAESPDQKDTDGGPKE PKEEESPV________ K D T P V - 0 0 0 2 0 0 3 2 0 0 0 1 0 0 2 1 1 0 0 1 0 0 13 1 1358.5838 P53985 P53985 488 500 SLC16A1 Monocarboxylate transporter 1 yes yes 2 0.001663 89.507 By MS/MS By MS/MS 1 1 2129800 919970 1209800 553 1406 596 1314;1315 1112;1113 1112 1898 2 DTGKTPVEPEVAIHR ________________ EPEVAIHRIRITLTSR K D T H R I 1 1 0 1 0 0 2 1 1 1 0 1 0 0 2 0 2 0 0 2 0 0 15 1 1647.858 E5RIP1;E5RJX2;P60866 E5RIP1 5 19 RPS20 40S ribosomal protein S20 yes no 3 0.0049097 71.637 By matching By MS/MS 1 1 4720700 2334600 2386100 554 554 597 1316;1317 1114 1114 3401 1 DTGVQLRKR TSRAEDTRDTGVQLRK TGVQLRKRKIPQARHS R D T K R K 0 2 0 1 0 1 0 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 2 1071.6149 J3KQ26 J3KQ26 52 60 ARMC5 yes yes 2 0.020079 55.064 By MS/MS 1 60631000 0 60631000 555 1005 598 1318 1115 1115 3560 0 DTIIDVVGAPLTPNSR PGLGPDPKDTIIDVVG APLTPNSRKRRESASS K D T S R K 1 1 1 2 0 0 0 1 0 2 1 0 0 0 2 1 2 0 0 2 0 0 16 0 1666.889 Q9NPF5 Q9NPF5 434 449 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 2 6.9456E-07 100.58 By MS/MS By MS/MS 1 1 8805700 4347000 4458700 556 2038 599 1319;1320 1116;1117 1117 2913;3937 2 DTIIDVVGAPLTPNSRK PGLGPDPKDTIIDVVG PLTPNSRKRRESASSS K D T R K R 1 1 1 2 0 0 0 1 0 2 1 1 0 0 2 1 2 0 0 2 0 0 17 1 1794.984 Q9NPF5 Q9NPF5 434 450 DMAP1 DNA methyltransferase 1-associated protein 1 yes yes 3 0.00076676 68.411 By MS/MS 1 660080 0 660080 557 2038 600 1321 1118 1118 2913;3937 1 DTILNINFQCAYPLDMK LVNDFIIRDTILNINF CAYPLDMKVSLQAALQ R D T M K V 1 0 2 2 1 1 0 0 0 2 2 1 1 1 1 0 1 0 1 0 0 0 17 0 2054.9805 P55259 P55259 311 327 GP2 Pancreatic secretory granule membrane major glycoprotein GP2 yes yes 2 0.006501 79.466 By MS/MS By MS/MS 1 1 9872400 5166900 4705500 558 1415 601 1322;1323 1119;1120 1120 189 2 DTISYTELDFELIK VRIDIMEKDTISYTEL ELDFELIKVEVKEMEK K D T I K V 0 0 0 2 0 0 2 0 0 2 2 1 0 1 0 1 2 0 1 0 0 0 14 0 1685.84 Q6UX06 Q6UX06 147 160 OLFM4 Olfactomedin-4 yes yes 2 3.0095E-60 162.38 By MS/MS By matching 1 1 48729000 31856000 16873000 559 1692 602 1324;1325 1121 1121 1 DTSPSSGSAVSSSK VQSLKTSRDTSPSSGS GSAVSSSKVLDKPSRL R D T S K V 1 0 0 1 0 0 0 1 0 0 0 1 0 0 1 7 1 0 0 1 0 0 14 0 1295.5841 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8 F8WF16 136 149 PPHLN1 Periphilin-1 yes no 2 0.017972 52.599 By matching By MS/MS 1 1 6980300 4013900 2966400 560 411 603 1326;1327 1122 1122 576 1 DTTVISHSPNTSYDTALEAR AATVAAQRDTTVISHS YDTALEARIQKEEEEI R D T A R I 2 1 1 2 0 0 1 0 1 1 1 0 0 0 1 3 4 0 1 1 0 0 20 0 2177.0237 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 707 726 AMOT Angiomotin yes no 2;3 8.8358E-44 127.71 By MS/MS By MS/MS 3 4 220170000 121940000 98239000 561 1590 604;605 1328;1329;1330;1331;1332;1333;1334 1123;1124;1125;1126;1127;1128 1125 2201;2202;2203;3781 6 DTVFALVNYIFFK DLVKELDRDTVFALVN LVNYIFFKGKWERPFE R D T F K G 1 0 1 1 0 0 0 0 0 1 1 1 0 3 0 0 1 0 1 2 0 0 13 0 1575.8337 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 203 215 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.0025073 73.233 By MS/MS 1 613130 613130 0 562 1 606 1335 1129 1129 1 DTYMLSSTVSSKILR NQDRSALKDTYMLSST TVSSKILRAIALKEGF K D T L R A 0 1 0 1 0 0 0 0 0 1 2 1 1 0 0 4 2 0 1 1 0 0 15 1 1699.8815 Q96G03 Q96G03 371 385 PGM2 Phosphoglucomutase-2 yes yes 2 0.018051 42.242 By matching By MS/MS 1 1 18237000 9015100 9221500 563 1892 607 1336;1337 1130 1130 2671;3883;4419 1 DTYVSSFPR RKDETNARDTYVSSFP TYVSSFPRAPSTSDSV R D T P R A 0 1 0 1 0 0 0 0 0 0 0 0 0 1 1 2 1 0 1 1 0 0 9 0 1070.5033 P23193 P23193 124 132 TCEA1 Transcription elongation factor A protein 1 yes yes 2 0.0012521 116.25 By MS/MS By MS/MS 2 1 582550 0 582550 564 1307 608 1338;1339;1340 1131;1132;1133 1133 4277 3 DVAAEAVARSPK QAARAAGRDVAAEAVA EAVARSPKRPAWGSRR R D V P K R 4 1 0 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 0 2 0 0 12 1 1212.6463 Q9UKY4 Q9UKY4 32 43 POMT2 Protein O-mannosyl-transferase 2 yes yes 2 0.0026135 95.981 By matching By MS/MS 1 1 1971800 1075400 896400 565 2115 609 1341;1342 1134 1134 3028 1 DVDASPSPLSVQDLK PPAELVQRDVDASPSP PLSVQDLKGLGYEKGK R D V L K G 1 0 0 3 0 1 0 0 0 0 2 1 0 0 2 3 0 0 0 2 0 0 15 0 1569.7886 Q8IWZ8 Q8IWZ8 405 419 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 2 0.019547 50.284 By MS/MS By matching 1 1 6521500 2705400 3816100 566 1755 610 1343;1344 1135 1135 2471 1 DVDETGITVASLER DLSLYIPRDVDETGIT ITVASLERFSTYTSDK R D V E R F 1 1 0 2 0 0 2 1 0 1 1 0 0 0 0 1 2 0 0 2 0 0 14 0 1503.7417 H7C466;Q8WU90 H7C466 19 32 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 2 0.011738 55.885 By matching By MS/MS 1 1 1212700 486130 726520 567 966 611 1345;1346 1136 1136 1297 1 DVEDMELSDVEDDGSK PEPVTDNRDVEDMELS DVEDDGSKIIVEDRKE R D V S K I 0 0 0 5 0 0 3 1 0 0 1 1 1 0 0 2 0 0 0 2 0 0 16 0 1781.7149 Q5VT52 Q5VT52 367 382 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 9.2445E-06 98.507 By MS/MS By MS/MS 2 2 19958000 8393400 11564000 568 1644 612;613 1347;1348;1349;1350 1137;1138;1139;1140 1138 241 2292 4 DVESPSWR INRSLASKDVESPSWR DVESPSWRSTTVLGLL K D V W R S 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 2 0 1 0 1 0 0 8 0 974.44576 F5H6E2;O00159 F5H6E2 381 388 MYO1C Unconventional myosin-Ic yes no 2 0.0081449 123.35 By MS/MS By MS/MS 1 1 1449200 513390 935820 569 720 614 1351;1352 1141;1142 1142 954 2 DVFLGMFLYEYAR CKNYAEAKDVFLGMFL MFLYEYARRHPDYSVV K D V A R R 1 1 0 1 0 0 1 1 0 0 2 0 1 2 0 0 0 0 2 1 0 0 13 0 1622.7803 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 348 360 ALB Serum albumin yes no 2 1.0831E-11 127.87 By MS/MS By MS/MS 28 29 765120000 410450000 354670000 + 570 209 615;616 1353;1354;1355;1356;1357;1358;1359;1360;1361;1362;1363;1364;1365;1366;1367;1368;1369;1370;1371;1372;1373;1374;1375;1376;1377;1378;1379;1380;1381;1382;1383;1384;1385;1386;1387;1388;1389;1390;1391;1392;1393;1394;1395;1396;1397;1398;1399;1400;1401;1402;1403;1404;1405;1406;1407;1408;1409 1143;1144;1145;1146;1147;1148;1149;1150;1151;1152;1153;1154;1155;1156;1157;1158;1159;1160;1161;1162;1163;1164;1165;1166;1167;1168;1169;1170;1171;1172;1173;1174;1175;1176;1177;1178;1179;1180;1181;1182;1183;1184;1185;1186;1187;1188 1176 28 43 DVMVQNYENLVSVAGLSVTK SAQRDLYKDVMVQNYE VAGLSVTKPYVITLLE K D V T K P 1 0 2 1 0 1 1 1 0 0 2 1 1 0 0 2 1 0 1 5 0 0 20 0 2165.1038 M0R074;B4DMN2;A0A087WYF4;A0A0D9SFG5;F8W889;Q2M3W8 M0R074 31 50 ZNF181;ZNF302 Zinc finger protein 181 yes no 3 0.016007 41.513 By matching By MS/MS 1 1 3694800 1616100 2078700 571 81 617 1410;1411 1189 1189 3234;4014 1 DVNAAIATIK YRGDVVPKDVNAAIAT NAAIATIKTKRSIQFV K D V I K T 3 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 10 0 1014.571 P68363;F5H5D3;Q9BQE3;Q71U36;Q13748;Q6PEY2 P68363 327 336 TUBA1B;TUBA1C;TUBA1A;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain yes no 2 0.0079393 77.533 By MS/MS By MS/MS 1 1 2714100 1037100 1677000 572 1439 618 1412;1413 1190;1191 1191 2 DVNGELIAVQRSMVCTQK AQIRLQFRDVNGELIA RSMVCTQKSKKTEFKT R D V Q K S 1 1 1 1 1 2 1 1 0 1 1 1 1 0 0 1 1 0 0 3 0 0 18 1 2047.019 E7ESD9;E7EN38;Q92878 E7ESD9 88 105 RAD50 DNA repair protein RAD50 yes no 3 0.0042561 40.962 By MS/MS 1 0 0 0 573 564 619 1414 1192 1192 85;371;372 66 3404 1 DVQEIFR LEQLDMRRDVQEIFRM RDVQEIFRMTPHEKQV R D V F R M 0 1 0 1 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 7 0 905.46068 A0A0G2JJZ9;O00148;Q13838;A0A140T9L4;A0A140T973;A0A140T9K1;A0A140T9X9;A0A140T996;F6S4E6;A0A0A0MT12;F6TRA5;F6UJC5;A0A140TA18;K7EQN7;F6WLT2;A0A140T9X3;Q5STU3 A0A0G2JJZ9 110 116 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.00030465 92.692 By MS/MS 1 0 0 0 574 243 620 1415 1193 1193 1 DVQLEGGCNYDYIEVFDGPYR YRVTVIFRDVQLEGGC EVFDGPYRSSPLIARV R D V Y R S 0 1 1 3 1 1 2 3 0 1 1 0 0 1 1 0 0 0 3 2 0 0 21 0 2508.0904 Q9UGM3 Q9UGM3 2052 2072 DMBT1 Deleted in malignant brain tumors 1 protein yes yes 2;3 0.0022151 89.541 By MS/MS By MS/MS 2 2 26656000 14828000 11828000 575 2095 621 1416;1417;1418;1419 1194;1195;1196;1197 1196 4 DVQSPGFLNEPLSSK SATCKNIKDVQSPGFL LNEPLSSKSQRRKSLK K D V S K S 0 0 1 1 0 1 1 1 0 0 2 1 0 1 2 3 0 0 0 1 0 0 15 0 1616.8046 E9PPJ1;Q8NG31;H0YCZ2 E9PPJ1 1047 1061 CASC5 Protein CASC5 yes no 2 0.00011756 87.088 By MS/MS 1 4471800 0 4471800 576 676 622 1420 1198 1198 915 1 DVSEYFYEK EGPKDREKDVSEYFYE VSEYFYEKSLPSVNDI K D V E K S 0 0 0 1 0 0 2 0 0 0 0 1 0 1 0 1 0 0 2 1 0 0 9 0 1178.5132 Q5VT06;H0Y7F7;Q5T2X4 Q5VT06 2607 2615 CEP350 Centrosome-associated protein 350 yes no 2 0.0051089 72.547 By MS/MS 1 367950 367950 0 577 1643 623 1421 1199 1199 4370 1 DVSLGTYGSR QDWEFQKRDVSLGTYG SLGTYGSRAAEPQEQE R D V S R A 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 2 1 0 1 1 0 0 10 0 1053.5091 Q9C0C2 Q9C0C2 934 943 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0041905 73.665 By MS/MS By MS/MS 1 1 1891200 1017100 874170 578 1985 624 1422;1423 1200;1201 1200 3920;4430 2 DVTIGGSAPIYVK LGFSITSRDVTIGGSA GSAPIYVKNILPRGAA R D V V K N 1 0 0 1 0 0 0 2 0 2 0 1 0 0 1 1 1 0 1 2 0 0 13 0 1318.7133 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8 Q5VWV2 435 447 PARD3 Partitioning defective 3 homolog yes no 2 0.00027381 78.655 By MS/MS By MS/MS 1 1 961550 422340 539210 579 1654 625 1424;1425 1202;1203 1203 4373 2 DVTNFTVGGFAPMSPR LAGGSKPRDVTNFTVG GFAPMSPRISSPMHPS R D V P R I 1 1 1 1 0 0 0 2 0 0 0 0 1 2 2 1 2 0 0 2 0 0 16 0 1694.8086 O00267 O00267 653 668 SUPT5H Transcription elongation factor SPT5 yes yes 2 8.9149E-06 95.767 By MS/MS By MS/MS 2 2 23050000 10147000 12904000 580 1081 626;627 1426;1427;1428;1429 1204;1205;1206 1206 124 1423 3 DVVFLIDGSQSAGPEFQYVR SPGVGGKRDVVFLIDG GPEFQYVRTLIERLVD R D V V R T 1 1 0 2 0 2 1 2 0 1 1 0 0 2 1 2 0 0 1 3 0 0 20 0 2226.0957 E7ENL6;P12111 E7ENL6 626 645 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 0.001949 82.55 By MS/MS By MS/MS 2 2 12711000 6266200 6444800 581 567 628 1430;1431;1432;1433 1207;1208;1209 1207 3 DVVLSIVNDLTIAESNCPR QDTFGRMRDVVLSIVN IAESNCPRGARVAVVT R D V P R G 1 1 2 2 1 0 1 0 0 2 2 0 0 0 1 2 1 0 0 3 0 0 19 0 2114.0678 E7ENL6;P12111 E7ENL6 1815 1833 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 8.3243E-49 114.74 By MS/MS By MS/MS 2 2 18235000 12155000 6080000 582 567 629 1434;1435;1436;1437 1210;1211;1212;1213;1214 1211 5 DVVLSTSPK RQGSWDSRDVVLSTSP VVLSTSPKLLATATAN R D V P K L 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 2 1 0 0 2 0 0 9 0 944.51786 A0A075B784;Q9P275 A0A075B784 576 584 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.0025955 90.827 By MS/MS By MS/MS 1 1 1650100 880820 769250 583 14 630 1438;1439 1215;1216 1216 13 2 DVVVSVEYSK QEKSPGTKDVVVSVEY VVSVEYSKKSDLDTSK K D V S K K 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 2 0 0 1 4 0 0 10 0 1123.5761 G3XAL9;P55011 G3XAL9 949 958 SLC12A2 Solute carrier family 12 member 2 yes no 2 0.0072507 68.809 By matching By MS/MS 1 1 727340 341850 385490 584 804 631 1440;1441 1217 1217 1067 1 DWEGNEAYSLYEHFYLSSEELNYR YVLKIHLKDWEGNEAY SSEELNYRIHLKGLTG K D W Y R I 1 1 2 1 0 0 5 1 1 0 3 0 0 1 0 3 0 1 4 0 0 0 24 0 3013.3042 E7EVQ3;O15123 E7EVQ3 376 399 ANGPT2 Angiopoietin-2 yes no 3 0.0016796 54.834 By MS/MS 1 18792000 18792000 0 585 597 632 1442 1218 1218 820;821 1 DWLCNSSYSFESDFDLTK WARLKHSRDWLCNSSY ESDFDLTKSLGVHTLI R D W T K S 0 0 1 3 1 0 1 0 0 0 2 1 0 2 0 4 1 1 1 0 0 0 18 0 2212.9259 Q15751;H0YNB1 Q15751 1567 1584 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes no 3 0.02084 42.277 By MS/MS 1 3588900 0 3588900 586 1567 633 1443 1219 1219 2163 1 DYDDMSPR RPMPPSRRDYDDMSPR DYDDMSPRRGPPPPPP R D Y P R R 0 1 0 3 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 8 0 997.38111 P61978;Q5T6W2 P61978 279 286 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.00013551 134.57 By MS/MS By MS/MS 2 3 139980000 66708000 73268000 587 1423 634;635 1444;1445;1446;1447;1448 1220;1221;1222;1223;1224;1225 1223 191 1914 6 DYELLCLDGTR WAKNLNEKDYELLCLD LLCLDGTRKPVEEYAN K D Y T R K 0 1 0 2 1 0 1 1 0 0 3 0 0 0 0 0 1 0 1 0 0 0 11 0 1353.6235 P02787 P02787 577 587 TF Serotransferrin yes yes 2 0.0080489 81.338 By MS/MS 1 506320 0 506320 588 1213 636 1449 1226 1226 1 DYEPPSPSPAPGAPPPPPQR LCRPPLPRDYEPPSPS APPPPPQRNASYLKTQ R D Y Q R N 2 1 0 1 0 1 1 1 0 0 0 0 0 0 10 2 0 0 1 0 0 0 20 0 2052.9905 A8MQ02;J3KN01;P55196;H0Y8L4 A8MQ02 1648 1667 MLLT4 Afadin yes no 3 0.0016246 62.684 By MS/MS By MS/MS 2 2 6347700 2946000 3401700 589 338 637 1450;1451;1452;1453 1227;1228;1229 1227 478;4069 3 DYNPYNYSDSISPFNK THSSPRSRDYNPYNYS DSISPFNKSALKEAMF R D Y N K S 0 0 3 2 0 0 0 0 0 1 0 1 0 1 2 3 0 0 3 0 0 0 16 0 1922.8323 E3W994;J3KR49;A0A0U1RQI6;E7ERI8;E7EW49;O75122;H7C4X8;H7C5M8 E3W994 997 1012 CLASP2 CLIP-associating protein 2 yes no 2 0.0007291 72.496 By MS/MS 1 1324000 0 1324000 590 263 638 1454 1230 1230 4050 1 DYQYSDQGIDY EYQDDYPRDYQYSDQG YSDQGIDY________ R D Y D Y - 0 0 0 3 0 2 0 1 0 1 0 0 0 0 0 1 0 0 3 0 0 0 11 0 1365.5361 Q15417 Q15417 319 329 CNN3 Calponin-3 yes yes 2 0.014004 72.607 By MS/MS By MS/MS 2 2 5125800 2708700 2417100 591 1555 639 1455;1456;1457;1458 1231;1232;1233 1231 4356;4357 1 DYSPSRNPPEVEAR GLGPGEARDYSPSRNP NPPEVEAR________ R D Y A R - 1 2 1 1 0 0 2 0 0 0 0 0 0 0 3 2 0 0 1 1 0 0 14 1 1615.759 Q9HCM7 Q9HCM7 1032 1045 FBRSL1 Fibrosin-1-like protein yes yes 3 0.0086203 60.345 By MS/MS 1 0 0 0 592 2034 640 1459 1234 1234 2906 1 EAAEPLSEPKEDQEAAELLSEPEEESER HIFQLFWREAAEPLSE EPEEESERHILELEEV R E A E R H 4 1 0 1 0 1 11 0 0 0 3 1 0 0 3 3 0 0 0 0 0 0 28 1 3140.4157 A0A0A0MTR7;A0A0A0MTC1;Q63HN8 A0A0A0MTR7 1239 1266 RNF213 E3 ubiquitin-protein ligase RNF213 yes no 3 0.002536 50.261 By MS/MS By matching 1 1 5561000 2125600 3435400 593 176 641 1460;1461 1235 1235 248 1 EAAFSPGQQDWSR SLSVGPQREAAFSPGQ PGQQDWSRDFCIEASE R E A S R D 2 1 0 1 0 2 1 1 0 0 0 0 0 1 1 2 0 1 0 0 0 0 13 0 1477.6586 Q9C0C2 Q9C0C2 1099 1111 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.017186 54.402 By matching By MS/MS 1 1 2154500 898240 1256200 594 1985 642 1462;1463 1236 1236 2826 1 EAAGPAPSPMR ARWQRKAKEAAGPAPS GPAPSPMRAANRSHSA K E A M R A 3 1 0 0 0 0 1 1 0 0 0 0 1 0 3 1 0 0 0 0 0 0 11 0 1082.5179 Q12834 Q12834 34 44 CDC20 Cell division cycle protein 20 homolog yes yes 2 0.0065159 68.262 By matching By MS/MS 1 1 1431500 646230 785250 595 1478 643 1464;1465 1237 1237 2000 1 EAALPPVSPLK RGRDAVKREAALPPVS LPPVSPLKAALSEEEL R E A L K A 2 0 0 0 0 0 1 0 0 0 2 1 0 0 3 1 0 0 0 1 0 0 11 0 1120.6492 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1061 1071 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 7.6907E-23 150.69 By MS/MS By MS/MS 1 1 20485000 8925300 11560000 596 595 644 1466;1467 1238;1239;1240;1241;1242;1243;1244;1245;1246;1247 1244 807 10 EAARSPDKPGGSPSASR QAETREAREAARSPDK GGSPSASRRKGRASEH R E A S R R 3 2 0 1 0 0 1 2 0 0 0 1 0 0 3 4 0 0 0 0 0 0 17 2 1668.818 Q9Y3T9 Q9Y3T9 45 61 NOC2L Nucleolar complex protein 2 homolog yes yes 3 0.0024306 76.118 By MS/MS By MS/MS 2 2 74403000 35928000 38475000 597 2156 645;646 1468;1469;1470;1471 1248;1249;1250 1249 3135;3136 3 EAASSPAGEPLR PSAAGADREAASSPAG SPAGEPLRKRPRRDGP R E A L R K 3 1 0 0 0 0 2 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 12 0 1183.5833 Q96EB6 Q96EB6 23 34 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 2 0.01844 69.03 By MS/MS 1 861960 861960 0 598 1887 647 1472 1251 1251 2663 0 EAASSSSGTQPAPPAPASPWDSKK RKRSGEAKEAASSSSG ASPWDSKKHRSRDRKP K E A K K H 5 0 0 1 0 1 1 1 0 0 0 2 0 0 5 6 1 1 0 0 0 0 24 1 2353.1186 Q9H7N4 Q9H7N4 531 554 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 3 0.0054366 46.154 By matching By MS/MS 1 1 6868300 3300500 3567800 599 2017 648 1473;1474 1252 1252 2884 1 EADDDEEVDDNIPEMPSPK RCPNMAMKEADDDEEV IPEMPSPKKMHQGKKK K E A P K K 1 0 1 5 0 0 4 0 0 1 0 1 1 0 3 1 0 0 0 1 0 0 19 0 2143.8739 P26358 P26358 698 716 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 0.0024165 75.682 By MS/MS By MS/MS 1 1 22203000 10039000 12164000 600 1314 649 1475;1476 1253;1254 1254 1730 2 EADSSSDYVNMDFTK QKPTHEQREADSSSDY YVNMDFTKRESNTPAP R E A T K R 1 0 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 15 0 1707.6934 O14654 O14654 914 928 IRS4 Insulin receptor substrate 4 yes yes 2 4.6107E-05 86.014 By MS/MS By MS/MS 2 3 23103000 9879700 13223000 601 1094 650;651 1477;1478;1479;1480;1481 1255;1256;1257;1258 1256 129 4228 4 EADSSSDYVNMDFTKR QKPTHEQREADSSSDY VNMDFTKRESNTPAPS R E A K R E 1 1 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 16 1 1863.7945 O14654 O14654 914 929 IRS4 Insulin receptor substrate 4 yes yes 2;3 3.7615E-20 124.62 By MS/MS By MS/MS 3 3 109560000 54777000 54780000 602 1094 652;653 1482;1483;1484;1485;1486;1487 1259;1260;1261;1262;1263;1264 1260 129 4228 6 EAEAAIYHLQLFEELR RMQHLIAREAEAAIYH LQLFEELRRLAPITSD R E A L R R 3 1 0 0 0 1 4 0 1 1 3 0 0 1 0 0 0 0 1 0 0 0 16 0 1930.9789 B4DNK4;P14618 B4DNK4 310 325 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 3 0.00078808 93.237 By MS/MS By MS/MS 1 1 3722200 1684000 2038100 603 376 654 1488;1489 1265;1266 1266 2 EAEALLQLNGDFLVR FHGKLSRREAEALLQL LNGDFLVRESTTTPGQ R E A V R E 2 1 1 1 0 1 2 1 0 0 4 0 0 1 0 0 0 0 0 1 0 0 15 0 1686.8941 H0Y539;X6R6D0;P29353 H0Y539 161 175 SHC1 SHC-transforming protein 1 yes no 2 1.2213E-61 164.04 By MS/MS By MS/MS 1 1 5943400 3656300 2287100 604 830 655 1490;1491 1267;1268 1267 2 EAEEGPTGASESQDSPR PAPPSKPKEAEEGPTG SESQDSPRKLKYEEPE K E A P R K 2 1 0 1 0 1 4 2 0 0 0 0 0 0 2 3 1 0 0 0 0 0 17 0 1745.734 H0Y507;Q5TCZ1 H0Y507 460 476 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.014369 50.722 By matching By MS/MS 1 2 1986200 711010 1275200 605 829 656 1492;1493;1494 1269;1270 1270 1113;1114 2 EAEFSDPENTR QSVGRQEKEAEFSDPE FSDPENTRTKKEQDWE K E A T R T 1 1 1 1 0 0 3 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 11 0 1293.5473 Q5T481 Q5T481 872 882 RBM20 RNA-binding protein 20 yes yes 2 0.0056213 71.085 By MS/MS By matching 1 1 4716000 2345300 2370700 606 1625 657 1495;1496 1271 1271 2259 1 EAGSPAQEFK NSSEEEAREAGSPAQE GSPAQEFKYQKSLPPR R E A F K Y 2 0 0 0 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 10 0 1062.4982 Q5JSZ5;Q5JT00 Q5JSZ5 610 619 PRRC2B Protein PRRC2B yes no 2 0.0029207 85.813 By MS/MS By MS/MS 1 1 3286100 1616400 1669700 607 1607 658 1497;1498 1272;1273 1273 2230 2 EAGVEMGDEDDLSTPNEK CEALAMLREAGVEMGD DLSTPNEKLLGHLVKE R E A E K L 1 0 1 3 0 0 4 2 0 0 1 1 1 0 1 1 1 0 0 1 0 0 18 0 1934.8051 H7BZ35;P14868 H7BZ35 71 88 DARS Aspartate--tRNA ligase, cytoplasmic yes no 2 0.0047825 64.313 By matching By MS/MS 1 1 1962200 696060 1266100 608 945 659 1499;1500 1274 1274 1 EAIIPGSVYDR TTAMYDAREAIIPGSV IPGSVYDRSSQGRPSS R E A D R S 1 1 0 1 0 0 1 1 0 2 0 0 0 0 1 1 0 0 1 1 0 0 11 0 1218.6245 Q92900 Q92900 950 960 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.00029321 104.2 By MS/MS By MS/MS 1 1 2126300 885720 1240600 609 1866 660 1501;1502 1275;1276 1276 4412 2 EALAEAALESPRPALVR HPEQENSREALAEAAL SPRPALVRSASSDTSE R E A V R S 5 2 0 0 0 0 3 0 0 0 3 0 0 0 2 1 0 0 0 1 0 0 17 1 1791.9843 J3QRP6;O14745 J3QRP6 152 168 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 2;3 0.00097362 78.401 By MS/MS By MS/MS 2 2 18051000 8412700 9638300 610 1027 661 1503;1504;1505;1506 1277;1278;1279 1278 1366 3 EALGLGPPAAQLTPPPAPVGLR LGPAGGDREALGLGPP PPAPVGLRGSGLRGLQ R E A L R G 4 1 0 0 0 1 1 3 0 0 4 0 0 0 6 0 1 0 0 1 0 0 22 0 2121.1946 A0A087WZ13;E9PAU2;Q8IY67 A0A087WZ13 451 472 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 3 0.0016177 65.887 By MS/MS By MS/MS 1 1 6325000 2525500 3799500 611 86 662 1507;1508 1280;1281 1281 3236 2 EALLQASR RQEAEEAKEALLQASR EALLQASRDQKKTQEQ K E A S R D 2 1 0 0 0 1 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 8 0 886.48723 P26038 P26038 401 408 MSN Moesin yes yes 2 0.0093272 86.189 By MS/MS By matching 1 1 48040000 22775000 25266000 612 1313 663 1509;1510 1282 1282 1729 1 EALQDVEDENQ GDGEEQNKEALQDVED QDVEDENQ________ K E A N Q - 1 0 1 2 0 2 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1288.5419 P62258;I3L0W5 P62258 245 255 YWHAE 14-3-3 protein epsilon yes no 2 0.0023858 87.696 By matching By MS/MS 1 1 13225000 4800000 8425400 613 1428 664 1511;1512 1283 1283 1 EALSPCPSTVSTK DIRTGNTREALSPCPS CPSTVSTKSQPGSSAS R E A T K S 1 0 0 0 1 0 1 0 0 0 1 1 0 0 2 3 2 0 0 1 0 0 13 0 1375.6653 Q08AD1 Q08AD1 670 682 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 0.0078981 61.657 By MS/MS 1 1903600 0 1903600 614 1472 665 1513 1284 1284 1982 1 EANANGSSPEPVKAVEAR TKQKQDSKEANANGSS PVKAVEARSPGLQKEA K E A A R S 4 1 2 0 0 0 3 1 0 0 0 1 0 0 2 2 0 0 0 2 0 0 18 1 1824.8966 Q3KQU3 Q3KQU3 735 752 MAP7D1 MAP7 domain-containing protein 1 yes yes 3 0.022348 48.899 By MS/MS 1 0 0 0 615 1583 666 1514 1285 1285 2188;2189 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK AGASPVEKEAPAEGEA ASSTSSPKAEDGATPS K E A P K A 10 0 0 0 0 0 6 3 0 0 0 1 0 0 4 6 2 0 0 0 0 0 32 0 2914.2952 P29966 P29966 106 137 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 1.0223E-70 131.97 By MS/MS By MS/MS 1 1 99037000 52266000 46772000 616 1325 667 1515;1516 1286;1287 1287 1744;3677 2 EAQKQLAQMTR LLERIRAKEAQKQLAQ KQLAQMTRCPEQE___ K E A T R C 2 1 0 0 0 3 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 11 1 1302.6714 H3BSY1;Q9H211 H3BSY1 175 185 CDT1 DNA replication factor Cdt1 yes no 2 0.018519 47.302 By MS/MS 1 814730 814730 0 617 932 668 1517 1288 1288 111 3534 1 EAQSIQYDPYSKASVAPGKR QGEGDVRREAQSIQYD ASVAPGKRPALPVQLQ R E A K R P 3 1 0 1 0 2 1 1 0 1 0 2 0 0 2 3 0 0 2 1 0 0 20 2 2194.1018 Q96M11 Q96M11 42 61 HYLS1 Hydrolethalus syndrome protein 1 yes yes 3 0.0063852 46.159 By matching By MS/MS 1 1 1982800 1017900 964820 618 1908 669 1518;1519 1289 1289 438 2703;4421 1 EASRPPEEPSAPSPTLPAQFK TPPAPSSREASRPPEE PTLPAQFKQRAPMYNS R E A F K Q 3 1 0 0 0 1 3 0 0 0 1 1 0 1 6 3 1 0 0 0 0 0 21 1 2235.1172 H0Y3X6;A0A0C4DFX9;Q9H3P2 H0Y3X6 355 375 NELFA Negative elongation factor A yes no 3 0.010948 47.089 By matching By MS/MS 1 1 14182000 7343600 6838600 619 199 670 1520;1521 1290 1290 287 1 EATAQKPTGSVGSTVTTPPPLVR LRQSQIQKEATAQKPT TTPPPLVRGTQNIPAG K E A V R G 2 1 0 0 0 1 1 2 0 0 1 1 0 0 4 2 5 0 0 3 0 0 23 1 2293.2278 Q86YP4 Q86YP4 173 195 GATAD2A Transcriptional repressor p66-alpha yes yes 3 0.0023231 74.287 By MS/MS By MS/MS 1 1 13070000 5934400 7135700 620 1744 671 1522;1523 1291;1292 1291 3848 2 EAVMRYLQTLS DGGFRQVKEAVMRYLQ MRYLQTLS________ K E A L S - 1 1 0 0 0 1 1 0 0 0 2 0 1 0 0 1 1 0 1 1 0 0 11 1 1309.67 P58753 P58753 211 221 TIRAP Toll/interleukin-1 receptor domain-containing adapter protein yes yes 2 0.012918 50.473 By MS/MS 1 415330 0 415330 621 1419 672 1524 1293 1293 190 1908;4321 0 EAVVDLHADDSRISEDETER SITTESLKEAVVDLHA ISEDETERNGDDGTHD K E A E R N 2 2 0 4 0 0 4 0 1 1 1 0 0 0 0 2 1 0 0 2 0 0 20 1 2285.0408 G3V3T3 G3V3T3 115 134 ACIN1 yes yes 3 0.0034985 62.475 By MS/MS By MS/MS 1 1 7031900 3652400 3379500 622 794 673 1525;1526 1294;1295 1295 1054;1055 2 ECELSPGVNR NLQNIRLRECELSPGV ELSPGVNRDLTRRVRN R E C N R D 0 1 1 0 1 0 2 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 10 0 1159.5292 Q9BXP5;H7C3A1 Q9BXP5 489 498 SRRT Serrate RNA effector molecule homolog yes no 2 0.0057689 71.379 By MS/MS 1 0 0 0 623 1975 674 1527 1296 1296 2806 1 ECSPTSSLER SASRPRGRECSPTSSL SPTSSLERLCRHKHQR R E C E R L 0 1 0 0 1 0 2 0 0 0 1 0 0 0 1 3 1 0 0 0 0 0 10 0 1164.5081 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 1122 1131 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 0.0054622 80.245 By MS/MS By matching 1 1 2095200 986360 1108800 624 252 675 1528;1529 1297 1297 364 1 EDALDDSVSSSSVHASPLASSPVRK EWDNYDLREDALDDSV LASSPVRKNLFRFGES R E D R K N 3 1 0 3 0 0 1 0 1 0 2 1 0 0 2 8 0 0 0 3 0 0 25 1 2540.2354 P49792;J3KNE0;Q7Z3J3;A6NKT7;J3KQ37;Q99666;O14715 P49792 2231 2255 RANBP2;RGPD3;RGPD4;RGPD8;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 3 6.0533E-05 69.763 By MS/MS By matching 2 2 15548000 8077600 7470400 625 1384 676;677 1530;1531;1532;1533 1298;1299 1299 1862;1863 2 EDANPSSRQRGLK LQANFTIREDANPSSR SSRQRGLKRFQANPEA R E D L K R 1 2 1 1 0 1 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 13 2 1456.7383 Q9NXH9 Q9NXH9 537 549 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes yes 2 0.006156 60.167 By MS/MS 1 0 0 0 626 2069 678 1534 1300 1300 303 2956;2957 1 EDGGGWWYNR DPRKQCSKEDGGGWWY GGGWWYNRCHAANPNG K E D N R C 0 1 1 1 0 0 1 3 0 0 0 0 0 0 0 0 0 2 1 0 0 0 10 0 1238.5105 D6REL8;P02675;CON__P02676 D6REL8 208 217 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 2 0.0046955 84.568 By MS/MS By MS/MS 1 1 2104400 1190300 914140 + 627 533 679 1535;1536 1301;1302 1302 2 EDGNEEDKENQGDETQGQQPPQR PPRQRQPREDGNEEDK QGQQPPQRRYRRNFNY R E D Q R R 0 1 2 3 0 5 5 3 0 0 0 1 0 0 2 0 1 0 0 0 0 0 23 1 2627.0968 H0Y449;P67809 H0Y449 307 329 YBX1 Nuclease-sensitive element-binding protein 1 yes no 3 0.00011197 47.991 By matching By MS/MS 1 1 18237000 6658300 11578000 628 822 680 1537;1538 1303 1303 1 EDGNEEDKENQGDETQGQQPPQRR PPRQRQPREDGNEEDK GQQPPQRRYRRNFNYR R E D R R Y 0 2 2 3 0 5 5 3 0 0 0 1 0 0 2 0 1 0 0 0 0 0 24 2 2783.1979 H0Y449;P67809 H0Y449 307 330 YBX1 Nuclease-sensitive element-binding protein 1 yes no 4 0.0066402 43.37 By matching By MS/MS 1 1 6635000 3393600 3241400 629 822 681 1539;1540 1304 1304 1 EDQEKMKEMFK GKPVVIPKEDQEKMKE EKMKEMFKINQFNLMA K E D F K I 0 0 0 1 0 1 3 0 0 0 0 3 2 1 0 0 0 0 0 0 0 0 11 2 1441.6581 K7EJV8;Q10472 K7EJV8 70 80 GALNT1 Polypeptide N-acetylgalactosaminyltransferase 1;Polypeptide N-acetylgalactosaminyltransferase 1 soluble form yes no 2 0.017211 53.751 By MS/MS By matching 1 1 1774800 829360 945470 630 1039 682 1541;1542 1305 1305 1 EDQTEYLEER TKVILHLKEDQTEYLE QTEYLEERRVKEVVKK K E D E R R 0 1 0 1 0 1 4 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1310.5626 P08238;Q58FF7;Q58FF6;P07900;G3V2J8 P08238 187 196 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha no no 2 0.0028846 96.342 By MS/MS By matching 1 1 3370300 1224800 2145500 631 1237;1234 683 1543;1544 1306 1306 1 EDSGLFSPIR PRPVKASREDSGLFSP SGLFSPIRSSAFSPLG R E D I R S 0 1 0 1 0 0 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1119.556 Q9UKA4 Q9UKA4 442 451 AKAP11 A-kinase anchor protein 11 yes yes 2 0.0019764 90.614 By MS/MS By matching 1 1 6694500 3530500 3164000 632 2106 684 1545;1546 1307 1307 3014 1 EDSGTFSLGK AEAPPLEREDSGTFSL SGTFSLGKMITAKPGK R E D G K M 0 0 0 1 0 0 1 2 0 0 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1039.4822 G5E9Q4;O75569 G5E9Q4 16 25 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 2 0.021814 56.087 By matching By MS/MS 1 1 2749000 1063600 1685400 633 811 685 1547;1548 1308 1308 1083 1 EDVEVAESPLR SPPLLCTREDVEVAES EVAESPLRVLAETPDS R E D L R V 1 1 0 1 0 0 3 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 11 0 1242.6092 J3KMX1;Q99567 J3KMX1 449 459 NUP88 Nuclear pore complex protein Nup88 yes no 2 1.8799E-15 142.76 By MS/MS By MS/MS 1 1 9048900 3659700 5389200 634 994 686 1549;1550 1309;1310 1310 1330 2 EEAQAEIEQYRLQR NRRLKQAKEEAQAEIE IEQYRLQREKEFKAKE K E E Q R E 2 2 0 0 0 3 4 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 14 1 1761.8646 O75348 O75348 38 51 ATP6V1G1 V-type proton ATPase subunit G 1 yes yes 2 0.010649 46.001 By matching By MS/MS 1 1 3698800 1377100 2321700 635 1156 687 1551;1552 1311 1311 400;401 1 EEASDDDMEGDEAVVR EDVYGEVREEASDDDM EGDEAVVRCTLSANLV R E E V R C 2 1 0 4 0 0 4 1 0 0 0 0 1 0 0 1 0 0 0 2 0 0 16 0 1765.6949 O75643 O75643 222 237 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 2.5445E-24 131.86 By MS/MS By MS/MS 2 2 61204000 27864000 33340000 636 1168 688;689 1553;1554;1555;1556 1312;1313;1314;1315 1313 139 1560 4 EEASGKSQFFKQYSQK PALVLISKEEASGKSQ FFKQYSQKHEACKVGK K E E Q K H 1 0 0 0 0 3 2 1 0 0 0 3 0 2 0 3 0 0 1 0 0 0 16 2 1890.9112 A0A1B0GVW8 A0A1B0GVW8 436 451 yes yes 2 0.0097265 42.843 By MS/MS 1 1092800 1092800 0 637 301 690 1557 1316 1316 352;353 430;431 1 EEDEEPESPPEK KEKTPSPKEEDEEPES EPESPPEKKTSTSPPP K E E E K K 0 0 0 1 0 0 6 0 0 0 0 1 0 0 3 1 0 0 0 0 0 0 12 0 1413.5783 Q9H1E3 Q9H1E3 207 218 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 1.7023E-05 86.772 By MS/MS 1 0 0 0 638 1992 691 1558 1317 1317 2846 1 EEDEEPESPPEKK KEKTPSPKEEDEEPES PESPPEKKTSTSPPPE K E E K K T 0 0 0 1 0 0 6 0 0 0 0 2 0 0 3 1 0 0 0 0 0 0 13 1 1541.6733 Q9H1E3 Q9H1E3 207 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 9.5305E-80 178.22 By MS/MS By MS/MS 1 1 5452000 2383700 3068300 639 1992 692 1559;1560 1318;1319;1320;1321 1320 2846 4 EEDEHPYELLLTAETK RIHGSAAREEDEHPYE LLLTAETKKVVLVDGK R E E T K K 1 0 0 1 0 0 5 0 1 0 3 1 0 0 1 0 2 0 1 0 0 0 16 0 1915.9051 Q92625 Q92625 449 464 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2;3 0.00036547 72.898 By MS/MS 2 4596300 0 4596300 640 1855 693 1561;1562 1322;1323 1323 4408 2 EEDEPEERSGDETPGSEVPGDK EEQGLGKREEDEPEER GSEVPGDKAAEEQGDD R E E D K A 0 1 0 3 0 0 7 3 0 0 0 1 0 0 3 2 1 0 0 1 0 0 22 1 2386.9885 H3BQZ7;Q1KMD3 H3BQZ7 153 174 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 3 0.021109 56.081 By matching By MS/MS 1 1 17370000 8235400 9135000 641 923 694 1563;1564 1324 1324 3533 1 EEDGADASEEDLTR EEDVKDTREEDGADAS ASEEDLTRARQEEGAD R E E T R A 2 1 0 3 0 0 4 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 14 0 1535.6223 E5RHA3;Q86X53 E5RHA3 137 150 ERICH1 Glutamate-rich protein 1 yes no 2 0.0088412 58.824 By MS/MS By matching 1 1 3676100 1986000 1690100 642 551 695 1565;1566 1325 1325 732 1 EEETSIDVAGKPNEVTK NEQKKESKEEETSIDV GKPNEVTKAAESPDQK K E E T K A 1 0 1 1 0 0 4 1 0 1 0 2 0 0 1 1 2 0 0 2 0 0 17 1 1844.9004 P53985 P53985 463 479 SLC16A1 Monocarboxylate transporter 1 yes yes 3 0.011776 62.104 By MS/MS By matching 1 1 2454500 1171600 1282800 643 1406 696 1567;1568 1326 1326 1899;3712 1 EEEWDPEYTPK TTFQKRPKEEEWDPEY WDPEYTPKSKKYFLHD K E E P K S 0 0 0 1 0 0 4 0 0 0 0 1 0 0 2 0 1 1 1 0 0 0 11 0 1421.5987 Q9NYF8;H0YF14;Q9Y2W1 Q9NYF8 832 842 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 no no 2 0.00047364 110.08 By MS/MS By MS/MS 1 1 2206500 1022000 1184500 644 2073;2146 697 1569;1570 1327;1328 1328 3944;3974;4448 2 EEHGGLIRSPR KPLTRGAKEEHGGLIR GGLIRSPRHEKKKKVR K E E P R H 0 2 0 0 0 0 2 2 1 1 1 0 0 0 1 1 0 0 0 0 0 0 11 1 1249.6527 P26368 P26368 71 81 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 3 0.0030654 71.976 By MS/MS 1 40120000 0 40120000 645 1315 698 1571 1329 1329 1732 1 EELLRLLQLK RAKDYHKKEELLRLLQ LLRLLQLKQSQVVFVL K E E L K Q 0 1 0 0 0 1 2 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 10 1 1253.7707 Q8NDA2 Q8NDA2 150 159 HMCN2 Hemicentin-2 yes yes 1 0.016913 44.395 By MS/MS By matching 1 1 2539000 1714300 824670 646 1798 699 1572;1573 1330 1330 0 EENERLQKEGSEK QREYASVKEENERLQK LQKEGSEKERHNQQLI K E E E K E 0 1 1 0 0 1 5 1 0 0 1 2 0 0 0 1 0 0 0 0 0 0 13 2 1574.7536 Q5JTU8;B1AMJ5;A0A0A0MRG9;Q96SN8 Q5JTU8 513 525 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 yes no 2 0.0071283 57.149 By MS/MS By matching 1 1 1433200 1213200 219990 647 140 700 1574;1575 1331 1331 22;342 189 1 EEPVSSGPEEAVGK KKKRKFSKEEPVSSGP GPEEAVGKSSSKKKKK K E E G K S 1 0 0 0 0 0 4 2 0 0 0 1 0 0 2 2 0 0 0 2 0 0 14 0 1413.6624 O00567 O00567 565 578 NOP56 Nucleolar protein 56 yes yes 2 0.0080689 59.607 By MS/MS By MS/MS 1 1 4215500 1690800 2524800 648 1088 701 1576;1577 1332;1333 1333 1429;1430 2 EEQTDTSDGESVTHHIR RSGSRERREEQTDTSD ESVTHHIRRLNQQPSQ R E E I R R 0 1 0 2 0 1 3 1 2 1 0 0 0 0 0 2 3 0 0 1 0 0 17 0 1939.8508 A2AB27;P36915 A2AB27 43 59 GNL1 Guanine nucleotide-binding protein-like 1 yes no 3 0.0047861 59.728 By MS/MS By MS/MS 1 1 22313000 10090000 12223000 649 320 702 1578;1579 1334;1335 1334 460;3318;3319 2 EETLEQRDFTTK CQLEKQIKEETLEQRD EQRDFTTKSEKFQEEE K E E T K S 0 1 0 1 0 1 3 0 0 0 1 1 0 1 0 0 3 0 0 0 0 0 12 1 1495.7155 H7C5V1;Q9BTF0 H7C5V1 140 151 THUMPD2 THUMP domain-containing protein 2 yes no 2 0.017984 42.041 By MS/MS 1 0 0 0 650 975 703 1580 1336 1336 3551;3552 1 EFGSLPTTPSEQR KETDKYIKEFGSLPTT PTTPSEQRQRKIQKDR K E F Q R Q 0 1 0 0 0 1 2 1 0 0 1 0 0 1 2 2 2 0 0 0 0 0 13 0 1447.6943 O15400 O15400 72 84 STX7 Syntaxin-7 yes yes 2 0.020377 63.181 By MS/MS By matching 1 1 2451700 1172600 1279100 651 1109 704 1581;1582 1337 1337 3600 1 EFQLLTRTDIYK KCPYQMFREFQLLTRT LTRTDIYKKTRHILES R E F Y K K 0 1 0 1 0 1 1 0 0 1 2 1 0 1 0 0 2 0 1 0 0 0 12 1 1525.814 H0YEH9;Q8N6K7 H0YEH9 14 25 SAMD3 Sterile alpha motif domain-containing protein 3 yes no 2 0.0074172 56.916 By matching By MS/MS 1 1 1074700 407340 667380 652 880 705 1583;1584 1338 1338 3524;4186 1 EFYYIQMEK IKWFSNFREFYYIQME FYYIQMEKSARQAISD R E F E K S 0 0 0 0 0 1 2 0 0 1 0 1 1 1 0 0 0 0 2 0 0 0 9 0 1249.5689 G3V3G0;Q3B8N5;Q92786 G3V3G0 489 497 PROX2;PROX1 Prospero homeobox protein 2;Prospero homeobox protein 1 yes no 3 0.019019 42.287 By MS/MS 1 0 0 0 653 791 706 1585 1339 1339 97 1 EGEEPTVYSDEEEPKDESAR HHVGKLLKEGEEPTVY EPKDESARKND_____ K E G A R K 1 1 0 2 0 0 7 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 20 1 2294.9663 O00264 O00264 173 192 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 0.0085573 50.966 By MS/MS 1 542580000 542580000 0 654 1080 707 1586 1340 1340 1421;4224 1 EGEEPTVYSDEEEPKDESARK HHVGKLLKEGEEPTVY PKDESARKND______ K E G R K N 1 1 0 2 0 0 7 1 0 0 0 2 0 0 2 2 1 0 1 1 0 0 21 2 2423.0612 O00264 O00264 173 193 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3;4 1.1667E-70 148.36 By MS/MS By MS/MS 2 2 164870000 79496000 85369000 655 1080 708 1587;1588;1589;1590 1341;1342;1343 1341 1421;4224 3 EGGSKSDSEDITR IDLVIDDREGGSKSDS SDSEDITRSANLTDQP R E G T R S 0 1 0 2 0 0 2 2 0 1 0 1 0 0 0 3 1 0 0 0 0 0 13 1 1379.6165 E9PDC4;F5GYS8;H0YNY8;U3KPR8;O00470 E9PDC4 65 77 MEIS1 Homeobox protein Meis1 yes no 2 0.017032 63.894 By MS/MS 1 556160 556160 0 656 614 709 1591 1344 1344 843 1 EGLELPEDEEEKK KSLVSVTKEGLELPED PEDEEEKKKMEESKAK K E G K K K 0 0 0 1 0 0 6 1 0 0 2 2 0 0 1 0 0 0 0 0 0 0 13 1 1543.7253 P08238;Q58FF7;Q58FF6;Q58FG0;P07900 P08238 539 551 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA5P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-alpha no no 3 0.019108 48.659 By MS/MS 1 0 0 0 657 1237;1234 710 1592 1345 1345 1 EGLYLSDTLPR EERKKQHKEGLYLSDT YLSDTLPRKKTTSSIS K E G P R K 0 1 0 1 0 0 1 1 0 0 3 0 0 0 1 1 1 0 1 0 0 0 11 0 1262.6507 E9PFQ4;Q86SQ0 E9PFQ4 848 858 PHLDB2 Pleckstrin homology-like domain family B member 2 yes no 2 0.011963 53.751 By MS/MS 1 250660 0 250660 658 626 711 1593 1346 1346 4152 1 EGMNIVEAMER HVVFGKVKEGMNIVEA NIVEAMERFGSRNGKT K E G E R F 1 1 1 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 0 11 0 1277.5744 P62937 P62937 134 144 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.0045582 79.693 By MS/MS 1 843040 0 843040 659 1435 712 1594 1347 1347 1 EGNSVEDYKDLHELK KNPIYRSREGNSVEDY YKDLHELKVTYSSNHH R E G L K V 0 0 1 2 0 0 3 1 1 0 2 2 0 0 0 1 0 0 1 1 0 0 15 1 1774.8374 O94991 O94991 769 783 SLITRK5 SLIT and NTRK-like protein 5 yes yes 3 0.00013522 79.744 By MS/MS By matching 1 1 2417500 1073300 1344100 660 1180 713 1595;1596 1348 1348 4251 1 EGNTTEDDFPSSPGNGNK TSGSGFHREGNTTEDD SSPGNGNKSSNSSEER R E G N K S 0 0 3 2 0 0 2 3 0 0 0 1 0 1 2 2 2 0 0 0 0 0 18 0 1864.7711 Q15007 Q15007 295 312 WTAP Pre-mRNA-splicing regulator WTAP yes yes 2 8.3065E-34 132.25 By MS/MS By MS/MS 2 2 23370000 11691000 11679000 661 1533 714;715 1597;1598;1599;1600 1349;1350;1351;1352 1350 210;211 2113;2114 4 EGPEPPEEVPPPTTPPVPK VEPQLPSKEGPEPPEE PTTPPVPKVEPKGDGI K E G P K V 0 0 0 0 0 0 4 1 0 0 0 1 0 0 9 0 2 0 0 2 0 0 19 0 1993.0044 P48634 P48634 597 615 PRRC2A Protein PRRC2A yes yes 2;3 0.0098127 82.705 By MS/MS By MS/MS 1 2 10100000 5564300 4535300 662 1373 716 1601;1602;1603 1353;1354;1355 1354 3696;3697 3 EGSHSPLDSADVR PDAERRPREGSHSPLD PLDSADVRVHVPRTSI R E G V R V 1 1 0 2 0 0 1 1 1 0 1 0 0 0 1 3 0 0 0 1 0 0 13 0 1368.627 A0A0A0MRC4;A0A0A0MSK4;Q86YR5 A0A0A0MRC4 445 457 GPSM1 G-protein-signaling modulator 1 yes no 2 0.0084545 61.167 By MS/MS By MS/MS 1 1 3091300 1487900 1603400 663 136 717 1604;1605 1356;1357 1356 184 2 EGSPAPLEPEPGAAQPK QTPESLSREGSPAPLE EPGAAQPKLAVIQEAR R E G P K L 3 0 0 0 0 1 3 2 0 0 1 1 0 0 5 1 0 0 0 0 0 0 17 0 1673.8261 Q01167 Q01167 396 412 FOXK2 Forkhead box protein K2 yes yes 2 0.0052645 58.172 By MS/MS By MS/MS 1 1 18924000 9710700 9213000 664 1449 718 1606;1607 1358;1359 1359 1931 2 EGSTQQLQTTSPK FIKVYWHREGSTQQLQ QLQTTSPKPLVQQPIL R E G P K P 0 0 0 0 0 3 1 1 0 0 1 1 0 0 1 2 3 0 0 0 0 0 13 0 1403.6892 A0A087X0H9;Q5T8P6 A0A087X0H9 611 623 RBM26 RNA-binding protein 26 yes no 2 0.00061446 91.712 By MS/MS By MS/MS 1 1 2892100 1251900 1640100 665 98 719 1608;1609 1360;1361 1360 125 2 EGSVLDILKSPGFASPK FRPAEILKEGSVLDIL SPGFASPKIDSVAAQP K E G P K I 1 0 0 1 0 0 1 2 0 1 2 2 0 1 2 3 0 0 0 1 0 0 17 1 1743.9407 P49790 P49790 605 621 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.018811 52.365 By MS/MS 1 0 0 0 666 1383 720 1610 1362 1362 1851;1852 1 EGTLTQVPLAPPPPGAPPSPAPAR DKEAPTPKEGTLTQVP PPSPAPARFTARGGRV K E G A R F 4 1 0 0 0 1 1 2 0 0 2 0 0 0 9 1 2 0 0 1 0 0 24 0 2317.243 P48634 P48634 1129 1152 PRRC2A Protein PRRC2A yes yes 3 0.00026226 64.422 By MS/MS 1 1878100 0 1878100 667 1373 721 1611 1363 1363 1822 1 EGVLYVGSK AEAAGKTKEGVLYVGS GVLYVGSKTKEGVVHG K E G S K T 0 0 0 0 0 0 1 2 0 0 1 1 0 0 0 1 0 0 1 2 0 0 9 0 950.5073 D6RA31;E7EPV7;Q16143;P37840 D6RA31 35 43 SNCA;SNCB Alpha-synuclein;Beta-synuclein yes no 2 0.015928 54.416 By matching By MS/MS 1 1 1631000 649550 981440 668 522 722 1612;1613 1364 1364 4133 1 EGVTPWASFKK TSDGEKKREGVTPWAS TPWASFKKMVTPKKRV R E G K K M 1 0 0 0 0 0 1 1 0 0 0 2 0 1 1 1 1 1 0 1 0 0 11 1 1248.6503 Q02952 Q02952 605 615 AKAP12 A-kinase anchor protein 12 yes yes 2 3.1441E-05 121.21 By MS/MS By MS/MS 1 1 26402000 11309000 15093000 669 1457 723 1614;1615 1365;1366 1366 1947 2 EGWAPASYLKKAK WYIRYLGKEGWAPASY ASYLKKAKDDLPTRKK K E G A K D 3 0 0 0 0 0 1 1 0 0 1 3 0 0 1 1 0 1 1 0 0 0 13 2 1447.7823 H0Y507;Q5TCZ1 H0Y507 239 251 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 3 0.0057813 56.414 By MS/MS 1 70289000 0 70289000 670 829 724 1616 1367 1367 1115;4176 1 EGYVPQEEVPVYENK WRKQRRVKEGYVPQEE EVPVYENKYVKFFKSK K E G N K Y 0 0 1 0 0 1 4 1 0 0 0 1 0 0 2 0 0 0 2 3 0 0 15 0 1778.8363 Q9BRP8 Q9BRP8 34 48 WIBG Partner of Y14 and mago yes yes 2 0.0011006 68.515 By matching By MS/MS 1 1 5996400 2731000 3265400 671 1957 725 1617;1618 1368 1368 4428 1 EGYYGYTGAFR NLCEPNNKEGYYGYTG YGYTGAFRCLVEKGDV K E G F R C 1 1 0 0 0 0 1 3 0 0 0 0 0 1 0 0 1 0 3 0 0 0 11 0 1282.5619 P02787;H7C5E8 P02787 531 541 TF Serotransferrin yes no 2 0.0065264 73.233 By MS/MS By MS/MS 1 1 3235000 1552300 1682700 672 1213 726 1619;1620 1369;1370 1370 2 EHAPLASPVENKEVYQCR VNKVAKPKEHAPLASP NKEVYQCRLCNAKLSS K E H C R L 2 1 1 0 1 1 3 0 1 0 1 1 0 0 2 1 0 0 1 2 0 0 18 1 2126.0215 Q9ULJ3 Q9ULJ3 708 725 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 3 0.0021598 63.827 By MS/MS By matching 1 1 2591500 1335700 1255700 673 2119 727 1621;1622 1371 1371 3032 1 EHIEIIAPSPQR RMDPFATKEHIEIIAP IIAPSPQRSRSFSVGI K E H Q R S 1 1 0 0 0 1 2 0 1 3 0 0 0 0 2 1 0 0 0 0 0 0 12 0 1388.7412 C9J185;E7ER02;Q9NZJ5 C9J185 586 597 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 yes no 2 0.00136 88.552 By MS/MS By MS/MS 1 1 1065000 512150 552830 674 435 728 1623;1624 1372;1373;1374 1373 627 3 EHIVDLEMLTVSSIGTFR VKSLSGPREHIVDLEM VSSIGTFRTSSVLRLT R E H F R T 0 1 0 1 0 0 2 1 1 2 2 0 1 1 0 2 2 0 0 2 0 0 18 0 2046.0456 A0A0U1RQV3;Q12805 A0A0U1RQV3 247 264 EFEMP1 EGF-containing fibulin-like extracellular matrix protein 1 yes no 3 0.00038567 88.551 By MS/MS By MS/MS 1 1 4925000 2894300 2030700 675 268 729 1625;1626 1375;1376 1375 42 2 EHSLQVSPSLEK PSLHSFIKEHSLQVSP QVSPSLEKGAKADTGL K E H E K G 0 0 0 0 0 1 2 0 1 0 2 1 0 0 1 3 0 0 0 1 0 0 12 0 1352.6936 O95235 O95235 526 537 KIF20A Kinesin-like protein KIF20A yes yes 2;3 9.92E-113 188.13 By MS/MS By MS/MS 2 2 7621800 3007900 4613900 676 1184 730 1627;1628;1629;1630 1377;1378;1379;1380 1378 1579 4 EHYPVSSPSSPSPPAQPGGVSR TYPMPTAKEHYPVSSP AQPGGVSRNSPLDCGS K E H S R N 1 1 0 0 0 1 1 2 1 0 0 0 0 0 6 6 0 0 1 2 0 0 22 0 2219.0607 H0YM23;O75179 H0YM23 1920 1941 ANKRD17 Ankyrin repeat domain-containing protein 17 yes no 3 0.016244 41.136 By matching By MS/MS 1 1 4685200 3091700 1593500 677 897 731 1631;1632 1381 1381 1203;1204;4193 1 EIDCLSPEAQK SPAAAQSREIDCLSPE CLSPEAQKLAEARLAA R E I Q K L 1 0 0 1 1 1 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 11 0 1288.5969 C9JTC6;Q32MZ4 C9JTC6 11 21 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes no 2 0.0067177 67.879 By MS/MS By MS/MS 1 1 2443200 863830 1579400 678 480 732 1633;1634 1382;1383 1382 669 2 EIEDAEKYSFMATVTK GEELKQAKEIEDAEKY SFMATVTKAPKKQIQF K E I T K A 2 0 0 1 0 0 3 0 0 1 0 2 1 1 0 1 2 0 1 1 0 0 16 1 1860.8815 O43865 O43865 21 36 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 2 0.0027855 68.515 By matching By MS/MS 1 1 5523800 2133000 3390800 679 1130 733 1635;1636 1384 1384 4243 1 EIEYVETVTSR NALKYEHKEIEYVETV YVETVTSRQSEIQKFI K E I S R Q 0 1 0 0 0 0 3 0 0 1 0 0 0 0 0 1 2 0 1 2 0 0 11 0 1324.6511 Q9UHR4 Q9UHR4 160 170 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 0.00015723 106.88 By MS/MS By MS/MS 1 1 2240300 1015200 1225000 680 2099 734 1637;1638 1385;1386 1386 4453 2 EIIAEYEAQIK QTKFKKDKEIIAEYEA AEYEAQIKEIRTQLVE K E I I K E 2 0 0 0 0 1 3 0 0 3 0 1 0 0 0 0 0 0 1 0 0 0 11 0 1305.6816 O43295 O43295 12 22 SRGAP3 SLIT-ROBO Rho GTPase-activating protein 3 yes yes 1 0.016964 44.203 By MS/MS 1 710010 0 710010 681 1118 735 1639 1387 1387 4239 0 EIPASPSR GAAEKPKKEIPASPSR EIPASPSRTKIPAEKE K E I S R T 1 1 0 0 0 0 1 0 0 1 0 0 0 0 2 2 0 0 0 0 0 0 8 0 855.44503 Q9NYZ3 Q9NYZ3 239 246 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.014106 82.029 By MS/MS 1 0 0 0 682 2074 736 1640 1388 1388 2980 1 EIPSATQSPISK KLEKKDAKEIPSATQS ATQSPISKKRKKKGFL K E I S K K 1 0 0 0 0 1 1 0 0 2 0 1 0 0 2 3 1 0 0 0 0 0 12 0 1256.6612 Q9BQG0;I3L1L3 Q9BQG0 1156 1167 MYBBP1A Myb-binding protein 1A yes no 2 4.6678E-15 137.81 By MS/MS By MS/MS 1 1 41677000 20784000 20893000 683 1952 737 1641;1642 1389;1390;1391;1392 1392 2765;3910 4 EIPSATQSPISKK KLEKKDAKEIPSATQS TQSPISKKRKKKGFLP K E I K K R 1 0 0 0 0 1 1 0 0 2 0 2 0 0 2 3 1 0 0 0 0 0 13 1 1384.7562 Q9BQG0;I3L1L3 Q9BQG0 1156 1168 MYBBP1A Myb-binding protein 1A yes no 2 0.0069143 72.848 By MS/MS By MS/MS 1 1 8359900 4593100 3766700 684 1952 738 1643;1644 1393;1394 1393 2765;3910 2 EIQNGNLHESDSESVPR EKKKNKKKEIQNGNLH SDSESVPRDFKLSDAL K E I P R D 0 1 2 1 0 1 3 1 1 1 1 0 0 0 1 3 0 0 0 1 0 0 17 0 1909.8766 Q86UP2 Q86UP2 66 82 KTN1 Kinectin yes yes 2;3 1.1941E-05 95.954 By MS/MS By MS/MS 8 7 207470000 112030000 95437000 685 1726 739;740 1645;1646;1647;1648;1649;1650;1651;1652;1653;1654;1655;1656;1657;1658;1659 1395;1396;1397;1398;1399;1400;1401;1402;1403;1404;1405;1406;1407 1398 237;238;429 2433;2434 13 EIQVIPLQRDDED ILAERIAKEIQVIPLQ PLQRDDED________ K E I E D - 0 1 0 3 0 2 2 0 0 2 1 0 0 0 1 0 0 0 0 1 0 0 13 1 1568.7682 P29218 P29218 265 277 IMPA1 Inositol monophosphatase 1 yes yes 2 0.014155 62.633 By matching By MS/MS 1 1 787870 267920 519950 686 1322 741 1660;1661 1408 1408 0 EIRYPVMLTAMEK VERDSEGKEIRYPVML VMLTAMEKLVARKVCV K E I E K L 1 1 0 0 0 0 2 0 0 1 1 1 2 0 1 0 1 0 1 1 0 0 13 1 1579.8102 F8W9A8;B7WPL9;Q6PFW1 F8W9A8 290 302 PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 yes no 2 0.0017087 70.412 By matching By MS/MS 1 1 85849000 45109000 40740000 687 403 742 1662;1663 1409 1409 54 4097 1 EISDDEAEEEK YLEKEREKEISDDEAE DDEAEEEKGEKEEEDK K E I E K G 1 0 0 2 0 0 5 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 11 0 1292.5256 P08238;Q58FF7 P08238 224 234 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.015395 58.592 By MS/MS 1 1205300 1205300 0 688 1237 743 1664 1410 1410 1632 1 EISEASENIYSDVR RKKTRKAKEISEASEN ENIYSDVRGLSQNQQI K E I V R G 1 1 1 1 0 0 3 0 0 2 0 0 0 0 0 3 0 0 1 1 0 0 14 0 1610.7424 Q8WYP5 Q8WYP5 1781 1794 AHCTF1 Protein ELYS yes yes 2 0.0020857 66.267 By MS/MS By matching 1 1 2783000 1560400 1222600 689 1845 744 1665;1666 1411 1411 4405 1 EISPGSGPGEIR ITEEMNGKEISPGSGP GSGPGEIRKVEPVTQK K E I I R K 0 1 0 0 0 0 2 3 0 2 0 0 0 0 2 2 0 0 0 0 0 0 12 0 1197.599 O43491;H0Y5B0;E9PK52;E9PHY5;E9PMV8;Q6R5J7;E9PMG5 O43491 713 724 EPB41L2 Band 4.1-like protein 2 yes no 2 0.0057564 68.171 By matching By MS/MS 1 1 3721500 1702500 2019000 690 1125 745 1667;1668 1412 1412 1496 1 EIVLADVIDNDSWR FGVDVTTKEIVLADVI VIDNDSWRLWPSGDRS K E I W R L 1 1 1 3 0 0 1 0 0 2 1 0 0 0 0 1 0 1 0 2 0 0 14 0 1643.8155 E9PBS1;P22234;D6RF62 E9PBS1 202 215 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 0.011816 58.676 By MS/MS 1 1100200 0 1100200 691 609 746 1669 1413 1413 1 EIYNTIR LNDTVDGKEIYNTIRR KEIYNTIRRKTKDAFY K E I I R R 0 1 1 0 0 0 1 0 0 2 0 0 0 0 0 0 1 0 1 0 0 0 7 0 907.47633 E9PGC0;P20936 E9PGC0 292 298 RASA1 Ras GTPase-activating protein 1 yes no 2 0.0049235 114.19 By MS/MS By MS/MS 1 1 3456700 1678000 1778600 692 632 747 1670;1671 1414;1415 1414 4154 2 EKADREVQAEQPSSSSPR KKKKKKEKEKADREVQ QPSSSSPRRKTVKEKD K E K P R R 2 2 0 1 0 2 3 0 0 0 0 1 0 0 2 4 0 0 0 1 0 0 18 2 1999.9559 Q9Y388 Q9Y388 173 190 RBMX2 RNA-binding motif protein, X-linked 2 yes yes 3 0.0045387 65.949 By MS/MS By MS/MS 1 1 2517600 965220 1552400 693 2151 748 1672;1673 1416;1417 1417 3126;3127;3128 2 EKAVTDEKPK EVKKEVDKEKAVTDEK AVTDEKPKQKDKPGEE K E K P K Q 1 0 0 1 0 0 2 0 0 0 0 3 0 0 1 0 1 0 0 1 0 0 10 2 1143.6136 Q63HK5 Q63HK5 477 486 TSHZ3 Teashirt homolog 3 yes yes 2 0.01686 54.722 By matching By MS/MS 1 1 1248400 501660 746720 694 1659 749 1674;1675 1418 1418 1 EKDSPFKPK RPKGSKGKEKDSPFKP KDSPFKPKLYKGDRGL K E K P K L 0 0 0 1 0 0 1 0 0 0 0 3 0 1 2 1 0 0 0 0 0 0 9 2 1074.571 Q15291 Q15291 494 502 RBBP5 Retinoblastoma-binding protein 5 yes yes 3 0.014647 80.737 By MS/MS By matching 1 1 2022700 987520 1035100 695 1550 750 1676;1677 1419 1419 2143 1 EKEESPQPR FTSVPGGREKEESPQP KEESPQPRRKRQPSSS R E K P R R 0 1 0 0 0 1 3 0 0 0 0 1 0 0 2 1 0 0 0 0 0 0 9 1 1098.5306 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 88 96 C12orf43 Uncharacterized protein C12orf43 yes no 2 0.0028224 98.04 By MS/MS By MS/MS 1 1 2765100 1380700 1384300 696 565 751 1678;1679 1420;1421 1421 747 2 EKEISDDEAEEEKGEK TLYLEKEREKEISDDE AEEEKGEKEEEDKDDE R E K E K E 1 0 0 2 0 0 7 1 0 1 0 3 0 0 0 1 0 0 0 0 0 0 16 2 1863.8222 P08238 P08238 222 237 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.014639 53.924 By MS/MS 1 0 0 0 697 1237 752 1680 1422 1422 1632 1 EKEPGEQASVPLSPK SPIRRKGKEKEPGEQA ASVPLSPKKGSEASAA K E K P K K 1 0 0 0 0 1 3 1 0 0 1 2 0 0 3 2 0 0 0 1 0 0 15 1 1594.8203 P42858 P42858 1187 1201 HTT Huntingtin yes yes 3 0.0022267 62.077 By MS/MS By matching 1 1 2276600 1220200 1056400 698 1359 753 1681;1682 1423 1423 1782 1 EKEQQQQQQQQQQQK GEEEKVLKEKEQQQQQ QQQQQQQKKKRDTRKG K E K Q K K 0 0 0 0 0 11 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 15 1 1940.93 Q5STZ8 Q5STZ8 61 75 ABCF1 yes yes 3 0.0011195 67.115 By MS/MS By matching 1 1 476210 227360 248850 699 1618 754 1683;1684 1424 1424 1 EKEVDGLLTSEPMGSPVSSK LKEEPKGKEKEVDGLL MGSPVSSKTESVSDKE K E K S K T 0 0 0 1 0 0 3 2 0 0 2 2 1 0 2 4 1 0 0 2 0 0 20 1 2089.0249 H3BUF6;Q8WWM7 H3BUF6 586 605 ATXN2L Ataxin-2-like protein yes no 3 0.0075608 49.773 By MS/MS 1 1718100 0 1718100 700 935 755 1685 1425 1425 1252 1 EKGSFSDTGLGDGK NTDKEKIKEKGSFSDT DTGLGDGKMKSDSFAP K E K G K M 0 0 0 2 0 0 1 4 0 0 1 2 0 1 0 2 1 0 0 0 0 0 14 1 1396.647 Q9Y2W1 Q9Y2W1 374 387 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.022033 58.824 By MS/MS By MS/MS 1 1 1306000 673010 632970 701 2146 756 1686;1687 1426;1427 1426 3114;3115 1 EKLQEEGGGSDEEETGSPSEDGMQSAR KRLIAEAKEKLQEEGG EDGMQSARTQARPREP K E K A R T 1 1 0 2 0 2 7 5 0 0 1 1 1 0 1 4 1 0 0 0 0 0 27 1 2838.1734 Q13610 Q13610 41 67 PWP1 Periodic tryptophan protein 1 homolog yes yes 3 2.2405E-06 70.112 By MS/MS By MS/MS 1 1 32096000 15604000 16492000 702 1509 757 1688;1689 1428;1429 1429 2069 2 EKLQEHMTSNKTTK RKTDAAIREKLQEHMT MTSNKTTKYFNQLILR R E K T K Y 0 0 1 0 0 1 2 0 1 0 1 3 1 0 0 1 3 0 0 0 0 0 14 2 1673.8407 Q4G0X9 Q4G0X9 634 647 CCDC40 Coiled-coil domain-containing protein 40 yes yes 2 0.019331 44.614 By matching By MS/MS 1 1 1537400 475560 1061800 703 1588 758 1690;1691 1430 1430 214 2195;3779 0 EKLQSFDSPER KGRGNDRREKLQSFDS QSFDSPERKRIKYSRE R E K E R K 0 1 0 1 0 1 2 0 0 0 1 1 0 1 1 2 0 0 0 0 0 0 11 1 1334.6466 E9PGM9;P78332 E9PGM9 886 896 RBM6 RNA-binding protein 6 yes no 2 3.0433E-05 122.64 By MS/MS By MS/MS 1 1 8642300 4066400 4575900 704 634 759 1692;1693 1431;1432 1431 858 2 EKQSSEEEEKETR GRQERSTKEKQSSEEE EEEEKETRGVQKRRGG K E K T R G 0 1 0 0 0 1 6 0 0 0 0 2 0 0 0 2 1 0 0 0 0 0 13 2 1607.7275 A2AAT0;Q92504 A2AAT0 182 194 SLC39A7 Zinc transporter SLC39A7 yes no 2;3 0.00076829 79.875 By MS/MS By MS/MS 2 2 25928000 9922100 16006000 705 319 760 1694;1695;1696;1697 1433;1434 1433 458;459 2 EKQYQNRMSLR KETTFFLKEKQYQNRM YQNRMSLRQRKTEFFK K E K L R Q 0 2 1 0 0 2 1 0 0 0 1 1 1 0 0 1 0 0 1 0 0 0 11 2 1451.7303 A0A075B754;Q96QE3 A0A075B754 511 521 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.020638 41.08 By MS/MS 1 0 0 0 706 13 761 1698 1435 1435 4 3999 1 EKTPELPEPSVK PSPAPEKKEKTPELPE ELPEPSVKVKEPSVQE K E K V K V 0 0 0 0 0 0 3 0 0 0 1 2 0 0 3 1 1 0 0 1 0 0 12 1 1352.7187 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 218 229 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 1.2167E-204 211.77 By MS/MS By MS/MS 2 2 40864000 22023000 18841000 707 346 762 1699;1700;1701;1702 1436;1437;1438;1439;1440;1441;1442;1443 1441 3325 8 EKTPSPKEEDEEPESPPEK PTASKASKEKTPSPKE EPESPPEKKTSTSPPP K E K E K K 0 0 0 1 0 0 7 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 19 2 2180.9961 Q9H1E3 Q9H1E3 200 218 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0031889 74.428 By matching By MS/MS 1 1 4876000 2309500 2566600 708 1992 763 1703;1704 1444 1444 2846 1 ELAEQTLNNIK ALIVEPSRELAEQTLN EQTLNNIKQFKKYIDN R E L I K Q 1 0 2 0 0 1 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 0 1271.6721 F1T0B3;A0A087X2G1;Q92499 F1T0B3 216 226 DDX1 ATP-dependent RNA helicase DDX1 yes no 2 0.0093649 67.113 By MS/MS By matching 1 1 1390700 601000 789670 709 117 764 1705;1706 1445 1445 1 ELDEEGSDPPLPGR QKAEALMRELDEEGSD SDPPLPGRAQRIRQVL R E L G R A 0 1 0 2 0 0 3 2 0 0 2 0 0 0 3 1 0 0 0 0 0 0 14 0 1509.6947 H7C0T1;H7C2R9;C9JQV0;Q9BRJ6 H7C0T1 137 150 C7orf50 Uncharacterized protein C7orf50 yes no 2 1.1972E-11 92.295 By MS/MS 1 0 0 0 710 474 765 1707 1446 1446 662 1 ELDPSLVSANDSPSGMQTR NASPQKLRELDPSLVS SPSGMQTRCVWSPLAS R E L T R C 1 1 1 2 0 1 1 1 0 0 2 0 1 0 2 4 1 0 0 1 0 0 19 0 2002.9266 Q5UIP0;H7C2B5 Q5UIP0 2150 2168 RIF1 Telomere-associated protein RIF1 yes no 2;3 7.3477E-34 130.95 By MS/MS By MS/MS 3 3 29470000 13870000 15599000 711 1641 766;767 1708;1709;1710;1711;1712;1713 1447;1448;1449;1450 1450 239 2282;2283 4 ELEEEEENSDEDELDSHTMVK KRHEEQQRELEEEEEN LDSHTMVKTSVESVGT R E L V K T 0 0 1 3 0 0 8 0 1 0 2 1 1 0 0 2 1 0 0 1 0 0 21 0 2506.0177 E5RFQ9;A0A087WZ06;Q13188 E5RFQ9 197 217 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes no 3 0.0012209 78.225 By matching By MS/MS 1 1 8841700 3113100 5728600 712 85 768 1714;1715 1451 1451 106 1 ELEKPIQSKPQSPVIQAAAVSPK NQVLQEARELEKPIQS QAAAVSPKFVRLKHSQ R E L P K F 3 0 0 0 0 3 2 0 0 2 1 3 0 0 4 3 0 0 0 2 0 0 23 2 2444.3639 Q9Y6D5 Q9Y6D5 207 229 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 3 0.0010651 76.028 By MS/MS 1 4296000 0 4296000 713 2176 769 1716 1452 1452 3160;3161 1 ELEQFQMR ILNERAAKELEQFQMR ELEQFQMRNAKLQQEN K E L M R N 0 1 0 0 0 2 2 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 8 0 1079.507 Q5T655 Q5T655 273 280 CFAP58 Cilia- and flagella-associated protein 58 yes yes 2 0.022206 54.205 By MS/MS By matching 1 1 3322800 1314700 2008100 714 1628 770 1717;1718 1453 1453 233 1 ELFDDPSYVNVQNLDK PPPPCPGRELFDDPSY VNVQNLDKARQAVGGA R E L D K A 0 0 2 3 0 1 1 0 0 0 2 1 0 1 1 1 0 0 1 2 0 0 16 0 1894.8949 H0Y539;X6R6D0;P29353;Q5T188 H0Y539 84 99 SHC1 SHC-transforming protein 1 yes no 2 0.001542 63.662 By matching By MS/MS 1 1 19157000 9894100 9262400 715 830 771 1719;1720 1454 1454 1117;4177 1 ELFDDPSYVNVQNLDKAR PPPPCPGRELFDDPSY VQNLDKARQAVGGAGP R E L A R Q 1 1 2 3 0 1 1 0 0 0 2 1 0 1 1 1 0 0 1 2 0 0 18 1 2122.0331 H0Y539;X6R6D0;P29353;Q5T188 H0Y539 84 101 SHC1 SHC-transforming protein 1 yes no 3 0.020561 43.454 By MS/MS 1 519960 0 519960 716 830 772 1721 1455 1455 1117;4177 1 ELHPQLLSPTK STPASPNRELHPQLLS PQLLSPTKAGPRKGHS R E L T K A 0 0 0 0 0 1 1 0 1 0 3 1 0 0 2 1 1 0 0 0 0 0 11 0 1261.703 E9PK89;Q8TBN0 E9PK89 219 229 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A yes no 2 0.012767 60.161 By MS/MS By matching 1 1 1298200 418970 879190 717 651 773 1722;1723 1456 1456 884 1 ELILGSETPSSPR LVLRPWIRELILGSET SETPSSPRAGQLLEDA R E L P R A 0 1 0 0 0 0 2 1 0 1 2 0 0 0 2 3 1 0 0 0 0 0 13 0 1384.7198 R4GNJ5;A0A0C4DGT6;Q96AP0 R4GNJ5 15 27 ACD Adrenocortical dysplasia protein homolog yes no 2 0.0075758 62.042 By MS/MS 1 1492000 0 1492000 718 220 774 1724 1457 1457 314 1 ELISLVEDVSSNYDGCCEGDVVQCIR KFPKIEFKELISLVED GDVVQCIRDTSKVMNH K E L I R D 0 1 1 3 3 1 3 2 0 2 2 0 0 0 0 3 0 0 1 4 0 0 26 0 3015.326 P43652 P43652 254 279 AFM Afamin yes yes 3 0.014994 36.943 By MS/MS 1 2763900 2763900 0 719 1360 775 1725 1458 1458 1 ELISNSSDALDK SNKEIFLRELISNSSD NSSDALDKIRYESLTD R E L D K I 1 0 1 2 0 0 1 0 0 1 2 1 0 0 0 3 0 0 0 0 0 0 12 0 1290.6303 P07900;G3V2J8;Q14568 P07900 47 58 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 yes no 2 0.016606 70.028 By matching By MS/MS 1 1 3991600 1784800 2206800 720 1234 776 1726;1727 1459 1459 0 ELKPQKSVVSDLEADDVK TSPKLSNKELKPQKSV DLEADDVKGSVPLSSS K E L V K G 1 0 0 3 0 1 2 0 0 0 2 3 0 0 1 2 0 0 0 3 0 0 18 2 1999.0474 P11388 P11388 1368 1385 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.014459 52.93 By MS/MS By matching 1 1 1686900 729710 957160 721 1258 777 1728;1729 1460 1460 1655;1656 1 ELKTDSSPNQAR YIQFSNHKELKTDSSP DSSPNQARAQAALQAV K E L A R A 1 1 1 1 0 1 1 0 0 0 1 1 0 0 1 2 1 0 0 0 0 0 12 1 1344.6634 K7ES59;A0A087WU68;A6NLN1;P26599 K7ES59 105 116 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2 0.00054794 83.877 By MS/MS By matching 1 1 1708800 1374200 334610 722 37 778 1730;1731 1461 1461 42 0 ELLDTSFEDLSKPK EPLESQDRELLDTSFE FEDLSKPKRKLADGRQ R E L P K R 0 0 0 2 0 0 2 0 0 0 3 2 0 1 1 2 1 0 0 0 0 0 14 1 1620.8247 P78345 P78345 230 243 RPP38 Ribonuclease P protein subunit p38 yes yes 2 0.013625 69.92 By MS/MS 1 1829200 0 1829200 723 1441 779 1732 1462 1462 3718 1 ELLHSVHPESPNLK QTDGILTKELLHSVHP HPESPNLKTSLCFKEQ K E L L K T 0 0 1 0 0 0 2 0 2 0 3 1 0 0 2 2 0 0 0 1 0 0 14 0 1598.8417 Q9Y217 Q9Y217 552 565 MTMR6 Myotubularin-related protein 6 yes yes 3 0.00018877 88.311 By MS/MS 1 4849300 0 4849300 724 2139 780 1733 1463 1463 3102 1 ELLQEQLEQLQREYSK REKLAEKKELLQEQLE QLQREYSKLKASCQES K E L S K L 0 1 0 0 0 4 4 0 0 0 4 1 0 0 0 1 0 0 1 0 0 0 16 1 2033.0429 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9 A0A087X0G7 319 334 IKBKG NF-kappa-B essential modulator yes no 2 0.014841 54.471 By MS/MS 1 1119100 0 1119100 725 47 781 1734 1464 1464 62 0 ELNQYRRSK DDYDEYSKELNQYRRS LNQYRRSKDSRGRGLS K E L S K D 0 2 1 0 0 1 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 0 9 2 1192.6313 Q9UPT8 Q9UPT8 309 317 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 2 0.014046 58.699 By matching By MS/MS 1 1 2427000 1262600 1164500 726 2131 782 1735;1736 1465 1465 325 3061 1 ELPSLSPAPDTGLSPSKR LKPAHRKRELPSLSPA TGLSPSKRTHQRSKSD R E L K R T 1 1 0 1 0 0 1 1 0 0 3 1 0 0 4 4 1 0 0 0 0 0 18 1 1850.9738 A0A0B4J1S8;Q9UBF8;A0A0A0MSL0 A0A0B4J1S8 265 282 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 0.00732 46.892 By MS/MS By matching 1 1 2484200 1383700 1100500 727 192 783 1737;1738 1466 1466 3285 1 ELQEAAAVPTTPR VTRKRLERELQEAAAV AAVPTTPRRGRPPKTR R E L P R R 3 1 0 0 0 1 2 0 0 0 1 0 0 0 2 0 2 0 0 1 0 0 13 0 1381.7201 Q96T58 Q96T58 1937 1949 SPEN Msx2-interacting protein yes yes 2 4.3804E-06 109.72 By MS/MS By MS/MS 1 1 3114900 1744700 1370200 728 1934 784 1739;1740 1467;1468 1467 3899;3900 2 ELQLLSPDYK EEECRMLKELQLLSPD QLLSPDYKQAMEYKKK K E L Y K Q 0 0 0 1 0 1 1 0 0 0 3 1 0 0 1 1 0 0 1 0 0 0 10 0 1204.634 H0Y758;Q5SQS8 H0Y758 104 113 C10orf120 Uncharacterized protein C10orf120 yes no 2 0.010676 60.59 By matching By MS/MS 1 1 9574700 4423600 5151000 729 842 785 1741;1742 1469 1469 392 4180 1 ELSDLESAR GISQPQWRELSDLESA LSDLESARQFCQTVGY R E L A R Q 1 1 0 1 0 0 2 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 9 0 1018.4931 F8VPD4;P27708 F8VPD4 1004 1012 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 1 0.010258 53.567 By matching By MS/MS 1 1 17759000 8278400 9481000 730 731 786 1743;1744 1470 1470 971;972 1 ELSDQATASPIVAR DSLDSKGKELSDQATA TASPIVARTDLSNIPG K E L A R T 3 1 0 1 0 1 1 0 0 1 1 0 0 0 1 2 1 0 0 1 0 0 14 0 1456.7522 Q5JSH3 Q5JSH3 88 101 WDR44 WD repeat-containing protein 44 yes yes 2 0.00020465 82.908 By MS/MS By matching 1 1 8713200 3552600 5160600 731 1606 787 1745;1746 1471 1471 2225 1 ELSESVQQQSTPVPLISPK SKAEMDLKELSESVQQ PVPLISPKRQIRSRFQ K E L P K R 0 0 0 0 0 3 2 0 0 1 2 1 0 0 3 4 1 0 0 2 0 0 19 0 2066.0895 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 458 476 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.022367 41.513 By MS/MS By matching 1 1 4023800 1748100 2275700 732 57 788 1747;1748 1472 1472 75 1 ELSLKASPLR VVLASVMKELSLKASP SLKASPLRSETAEGIV K E L L R S 1 1 0 0 0 0 1 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 1 1112.6554 Q86W50 Q86W50 323 332 METTL16 Methyltransferase-like protein 16 yes yes 2 0.021569 59.418 By matching By MS/MS 1 1 2239800 1176600 1063200 733 1734 789 1749;1750 1473 1473 2442 0 ELSNSPLR PHFSPEHKELSNSPLR ELSNSPLRENSFGSPL K E L L R E 0 1 1 0 0 0 1 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 8 0 914.48214 Q9UQ35 Q9UQ35 1316 1323 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0076743 96.143 By matching By MS/MS 1 1 4149000 1703900 2445100 734 2134 790 1751;1752 1474 1474 3070 1 ELSNSPLRENSFGSPLEFR PHFSPEHKELSNSPLR FGSPLEFRNSGPLGTE K E L F R N 0 2 2 0 0 0 3 1 0 0 3 0 0 2 2 4 0 0 0 0 0 0 19 1 2178.0705 Q9UQ35 Q9UQ35 1316 1334 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0081449 49.537 By matching By MS/MS 1 1 4330300 1833200 2497100 735 2134 791 1753;1754 1475 1475 3070 1 ELSSEPQTPPAQK SRAIRGEKELSSEPQT PQTPPAQKGTVPLPTI K E L Q K G 1 0 0 0 0 2 2 0 0 0 1 1 0 0 3 2 1 0 0 0 0 0 13 0 1410.6991 E9PGC8;P78559 E9PGC8 735 747 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.0017205 86.882 By MS/MS By MS/MS 1 2 4274900 2172700 2102300 736 633 792 1755;1756;1757 1476;1477 1476 3436 2 ELVEPLTPSGEAPNQALLR LRRLLQERELVEPLTP APNQALLRILKETEFK R E L L R I 2 1 1 0 0 1 3 1 0 0 4 0 0 0 3 1 1 0 0 1 0 0 19 0 2033.0793 Q504U8;E9PFD7;P00533 Q504U8 642 660 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor yes no 2 0.021595 47.062 By MS/MS By matching 1 1 6601200 3263000 3338200 737 622 793 1758;1759 1478 1478 847 1 EMEHNTVCAAGTSPVGEIGEEK INNHLIAKEMEHNTVC VGEIGEEKILPTSETK K E M E K I 2 0 1 0 1 0 5 3 1 1 0 1 1 0 1 1 2 0 0 2 0 0 22 0 2344.0311 P18583;H7C1M2 P18583 1544 1565 SON Protein SON yes no 3 0.0014886 79.695 By MS/MS By matching 2 2 25434000 14271000 11162000 738 1288 794;795 1760;1761;1762;1763 1479;1480 1479 167 1690;3662 2 ENDYESISDLQQGR GHHGLVPKENDYESIS ISDLQQGRDITRL___ K E N G R D 0 1 1 2 0 2 2 1 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1652.7278 Q9NWQ8 Q9NWQ8 414 427 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 5.3852E-15 125.74 By MS/MS By MS/MS 1 1 20492000 10495000 9996900 739 2065 796 1764;1765 1481;1482 1481 4445 2 ENELPTTPVKK VPYKRRKKENELPTTP LPTTPVKKDSPKNITL K E N K K D 0 0 1 0 0 0 2 0 0 0 1 2 0 0 2 0 2 0 0 1 0 0 11 1 1254.682 H0YCH1;O75398 H0YCH1 94 104 DEAF1 Deformed epidermal autoregulatory factor 1 homolog yes no 2 0.0071875 85.672 By matching By MS/MS 1 1 1986200 1059400 926810 740 872 797 1766;1767 1483 1483 3521;3522 1 ENIKPNETSPSFSK QNSPAGNKENIKPNET ETSPSFSKAENKGISP K E N S K A 0 0 2 0 0 0 2 0 0 1 0 2 0 1 2 3 1 0 0 0 0 0 14 1 1576.7733 F8W0B5;H0YH87;F8WB06;F8VQP2;V9GY86;Q99700 F8W0B5 142 155 ATXN2 Ataxin-2 yes no 2 0.0011358 75.911 By matching By MS/MS 1 1 6879300 2868700 4010600 741 734 798 1768;1769 1484 1484 978 1 ENPETGVYIK PGKRLELKENPETGVY PETGVYIKDLSSFVTK K E N I K D 0 0 1 0 0 0 2 1 0 1 0 1 0 0 1 0 1 0 1 1 0 0 10 0 1148.5714 F8WAR6;F8WER6;O14782 F8WAR6 169 178 KIF3C Kinesin-like protein;Kinesin-like protein KIF3C yes no 3 0.0088303 67.252 By matching By MS/MS 1 1 44914000 18486000 26428000 742 762 799 1770;1771 1485 1485 3485 1 ENPPVEDSSDEDDKR YLGDDMKRENPPVEDS SSDEDDKRNQGNLYDK R E N K R N 0 1 1 4 0 0 3 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 15 1 1730.7231 Q8TCJ2 Q8TCJ2 491 505 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 3 0.0011454 63.374 By matching By MS/MS 1 1 2589200 1260900 1328300 743 1819 800 1772;1773 1486 1486 2563 1 ENQELRDAIRQSNQILR ________________ RQSNQILRERCEELLH - E N L R E 1 3 2 1 0 3 2 0 0 2 2 0 0 0 0 1 0 0 0 0 0 0 17 2 2082.093 A0A087X1K7 A0A087X1K7 1 17 IKBKG yes yes 2 0.0016357 63.944 By MS/MS 1 0 0 0 744 109 801 1774 1487 1487 339 141 1 ENRQNDFQNCK SVCKPSSKENRQNDFQ QNDFQNCKPRHDPYTP K E N C K P 0 1 3 1 1 2 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 11 1 1451.6212 A0A087X0H2;Q9Y620 A0A087X0H2 58 68 RAD54B DNA repair and recombination protein RAD54B yes no 2 0.0059341 75.043 By MS/MS By matching 1 1 2233400 1332200 901210 745 97 802 1775;1776 1488 1488 16;337 0 ENSSQIAQDHQKK CDSPSSDKENSSQIAQ IAQDHQKKETVVKEDE K E N K K E 1 0 1 1 0 3 1 0 1 1 0 2 0 0 0 2 0 0 0 0 0 0 13 1 1511.7328 Q9UIG0 Q9UIG0 164 176 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 3 0.019461 40.373 By MS/MS 1 802270 0 802270 746 2100 803 1777 1489 1489 0 ENVEYIEREESDGEYDEFGRK YGGGFNERENVEYIER EYDEFGRKKKKYRGKA R E N R K K 0 2 1 2 0 0 7 2 0 1 0 1 0 1 0 1 0 0 2 1 0 0 21 2 2592.1252 O95218 O95218 110 130 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 0.015847 51.166 By matching By MS/MS 1 1 67290000 20032000 47258000 747 1183 804 1778;1779 1490 1490 1577 1 ENVFLSYQDKR NSDPAHHRENVFLSYQ FLSYQDKRINHGSLPH R E N K R I 0 1 1 1 0 1 1 0 0 0 1 1 0 1 0 1 0 0 1 1 0 0 11 1 1397.6939 Q5VU13 Q5VU13 74 84 VSIG8 V-set and immunoglobulin domain-containing protein 8 yes yes 2 0.0040361 58.674 By matching By MS/MS 1 1 1090400 409130 681230 748 1648 805 1780;1781 1491 1491 2304;4372 1 ENVSDLTLGPGNSPITR HVDSSSGRENVSDLTL PGNSPITRMNPASGAL R E N T R M 0 1 2 1 0 0 1 2 0 1 2 0 0 0 2 2 2 0 0 1 0 0 17 0 1768.8955 Q6DCA0 Q6DCA0 62 78 AMMECR1L AMMECR1-like protein yes yes 2 2.2897E-30 135.94 By matching By MS/MS 1 1 8491600 3993000 4498600 749 1664 806 1782;1783 1492 1492 2325 1 ENYQFLQTDKKEQEK ELVQKLAKENYQFLQT TDKKEQEKSEHQDDEV K E N E K S 0 0 1 1 0 3 3 0 0 0 1 3 0 1 0 0 1 0 1 0 0 0 15 2 1926.9323 C9JHM4;E9PGY3;A8MQ07 C9JHM4 43 57 RAPGEF5 yes no 2 0.0071668 47.429 By MS/MS By matching 1 1 4139900 2268100 1871800 750 339 807 1784;1785 1493 1493 57;356 4073 1 EPAITSQNSPEAR KDLDEKKKEPAITSQN SQNSPEAREESTSSGN K E P A R E 2 1 1 0 0 1 2 0 0 1 0 0 0 0 2 2 1 0 0 0 0 0 13 0 1398.6739 P23193;E5RIS7 P23193 92 104 TCEA1 Transcription elongation factor A protein 1 yes no 2 0.00048723 83.856 By MS/MS By MS/MS 1 1 6908900 3376000 3533000 751 1307 808 1786;1787 1494;1495 1495 1717;1718 2 EPLLSSSENGNGGR VSERKNTREPLLSSSE SENGNGGRETSPADAR R E P G R E 0 1 2 0 0 0 2 3 0 0 2 0 0 0 1 3 0 0 0 0 0 0 14 0 1415.6641 M0R2C7;M0QYC1;M0QZR4;Q92888 M0R2C7 208 221 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes no 2 0.011646 55.98 By MS/MS By MS/MS 1 1 1801500 1048000 753550 752 1063 809 1788;1789 1496;1497 1496 1398 2 EPLSSETQYSVDTR HNIDHAQREPLSSETQ TQYSVDTRRPAPQKAL R E P T R R 0 1 0 1 0 1 2 0 0 0 1 0 0 0 1 3 2 0 1 1 0 0 14 0 1610.7424 A6PW57;Q99755;A2A3N6 A6PW57 326 339 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 2 0.0015447 69.261 By MS/MS By MS/MS 1 1 4899800 1843800 3056000 753 334 810 1790;1791 1498;1499 1499 475;4066 2 EPSEVPTPK TALVGSQKEPSEVPTP PSEVPTPKRPRGRPKG K E P P K R 0 0 0 0 0 0 2 0 0 0 0 1 0 0 3 1 1 0 0 1 0 0 9 0 982.49713 P17096 P17096 47 55 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2 0.0055773 80.737 By MS/MS 1 0 0 0 754 1281 811 1792 1500 1500 3660 1 EQDLPLAEAVRPKTPPVVIK KEEKSNGREQDLPLAE KTPPVVIKSQLKTQED R E Q I K S 2 1 0 1 0 1 2 0 0 1 2 2 0 0 4 0 1 0 0 3 0 0 20 2 2199.2627 Q96A49 Q96A49 235 254 SYAP1 Synapse-associated protein 1 yes yes 3 0.013491 68.129 By MS/MS By MS/MS 1 1 12096000 3584600 8511500 755 1872 812 1793;1794 1501;1502 1502 3878 2 EQEDDLTSQTLFVLKDMK SLRQLKTKEQEDDLTS LFVLKDMKIRFPGKSD K E Q M K I 0 0 0 3 0 2 2 0 0 0 3 2 1 1 0 1 2 0 0 1 0 0 18 1 2139.0406 F2Z2J7;Q6ZT98 F2Z2J7 360 377 TTLL7 Tubulin polyglutamylase TTLL7 yes no 3 0.016245 41.695 By MS/MS 1 51113000 51113000 0 756 687 813 1795 1503 1503 80 924;3460;3461 1 EQISDIDDAVR PEQWSQLKEQISDIDD SDIDDAVRKL______ K E Q V R K 1 1 0 3 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1259.5994 P53999 P53999 115 125 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 2 0.0092116 67.334 By MS/MS By MS/MS 2 2 2639300 1321000 1318300 757 1407 814;815 1796;1797;1798;1799 1504;1505;1506 1505 1900 3 EQSEVSVSPR SPDRDKKKEQSEVSVS SEVSVSPRASKHHYSR K E Q P R A 0 1 0 0 0 1 2 0 0 0 0 0 0 0 1 3 0 0 0 2 0 0 10 0 1116.5411 Q7L4I2;E9PI52 Q7L4I2 25 34 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 2 0.00019008 112.84 By MS/MS By MS/MS 1 1 15652000 7574900 8077400 758 1704 816 1800;1801 1507;1508;1509;1510 1510 2381 4 EQVANSAFVER YYITGESKEQVANSAF ANSAFVERVRKRGFEV K E Q E R V 2 1 1 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1248.6099 P08238;Q58FF7 P08238 492 502 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.001507 99.568 By matching By MS/MS 1 1 2365500 967640 1397900 759 1237 817 1802;1803 1511 1511 1 EQVNSMVDISK RLKHRKLREQVNSMVD NSMVDISKMHMILYDL R E Q S K M 0 0 1 1 0 1 1 0 0 1 0 1 1 0 0 2 0 0 0 2 0 0 11 0 1248.602 M0R1J0;D1MQ08;O15554 M0R1J0 101 111 KCNN4 Intermediate conductance calcium-activated potassium channel protein 4 yes no 2 0.0084748 50.843 By MS/MS 1 698900 698900 0 760 515 818 1804 1512 1512 73 703;704 1 EQYVPPRSPK GVTRRNGKEQYVPPRS YVPPRSPK________ K E Q P K - 0 1 0 0 0 1 1 0 0 0 0 1 0 0 3 1 0 0 1 1 0 0 10 1 1199.6299 Q71RC2;X6RLN4 Q71RC2 715 724 LARP4 La-related protein 4 yes no 2 9.6849E-06 130.1 By MS/MS By MS/MS 2 2 12802000 6126500 6675600 761 1700 819 1805;1806;1807;1808 1513;1514;1515;1516 1513 2374 3 ERDHSPTPSVFNSDEER ERTRERERERDHSPTP VFNSDEERYRYREYAE R E R E R Y 0 2 1 2 0 0 3 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 17 1 2000.8824 Q6UN15 Q6UN15 488 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 3 0.0016131 66.041 By MS/MS By MS/MS 2 2 16849000 8490600 8358700 762 1690 820;821 1809;1810;1811;1812 1517;1518;1519;1520 1518 2364;2365;3820 4 ERDHSPTPSVFNSDEERYR ERTRERERERDHSPTP NSDEERYRYREYAERG R E R Y R Y 0 3 1 2 0 0 3 0 1 0 0 0 0 1 2 3 1 0 1 1 0 0 19 2 2320.0469 Q6UN15 Q6UN15 488 506 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 4 0.0059183 60.541 By MS/MS By matching 1 1 8244700 3305600 4939100 763 1690 822 1813;1814 1521 1521 2364;2365;3820 1 ERDYAEIQDFHR EFRERQARERDYAEIQ AEIQDFHRTFGCDDEL R E R H R T 1 2 0 2 0 1 2 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 12 1 1577.7223 Q5VWV2;Q8TEW0 Q5VWV2 1017 1028 PARD3 Partitioning defective 3 homolog yes no 3 9.4203E-40 159.08 By MS/MS By MS/MS 1 1 7694500 3697100 3997400 764 1654 823 1815;1816 1522;1523 1523 4374 2 ERDYPFYER PLPRDLERERDYPFYE RDYPFYERVRPAYSLE R E R E R V 0 2 0 1 0 0 2 0 0 0 0 0 0 1 1 0 0 0 2 0 0 0 9 1 1273.5728 A0A087WWP4;Q96T37 A0A087WWP4 286 294 RBM15 Putative RNA-binding protein 15 yes no 2 0.009904 83.647 By MS/MS By MS/MS 1 1 1979600 804960 1174600 765 67 824 1817;1818 1524;1525 1524 4009 2 EREESEDELEEANGNNPIDIEVDQNK RHARKQKREREESEDE DIEVDQNKESKKEVPP R E R N K E 1 1 4 3 0 1 8 1 0 2 1 1 0 0 1 1 0 0 0 1 0 0 26 1 3014.3225 Q9UKL0 Q9UKL0 256 281 RCOR1 REST corepressor 1 yes yes 3 0.00078335 60.472 By matching By MS/MS 1 1 6421200 3207200 3214000 766 2110 825 1819;1820 1526 1526 318 3022 1 ERESSANNSVSPSESLR NHHELDHRERESSANN VSPSESLRASEKHRGS R E R L R A 1 2 2 0 0 0 3 0 0 0 1 0 0 0 1 6 0 0 0 1 0 0 17 1 1847.8609 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726 H0YKH0 193 209 TLE3 Transducin-like enhancer protein 3 yes no 3 0.008133 50.831 By MS/MS By matching 1 1 7849200 4532000 3317200 767 722 826 1821;1822 1527 1527 960;961 1 EREVDEDSEPEREVR VPFVRVKREREVDEDS SEPEREVRAKNGRVDS R E R V R A 0 3 0 2 0 0 6 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 15 2 1872.845 F8WC91;B9A018;Q53GS9 F8WC91 75 89 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 2 0.0078969 60.968 By matching By MS/MS 1 1 8499000 4944600 3554400 768 422 827 1823;1824 1528 1528 589 0 ERGTPPVDPK RHAPAMLRERGTPPVD GTPPVDPKLAWVGDVF R E R P K L 0 1 0 1 0 0 1 1 0 0 0 1 0 0 3 0 1 0 0 1 0 0 10 1 1094.572 P48634 P48634 779 788 PRRC2A Protein PRRC2A yes yes 2 0.0028773 109.16 By MS/MS 1 2261400 2261400 0 769 1373 828 1825 1529 1529 3698 1 ERIQQFDDGGSDEEDIWEEK ALFEACCKERIQQFDD EEDIWEEKHIAFTPES K E R E K H 0 1 0 4 0 2 5 2 0 2 0 1 0 1 0 1 0 1 0 0 0 0 20 1 2424.0353 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 314 333 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 3 0.018676 43.696 By MS/MS By matching 1 1 3578400 1011900 2566400 770 655 829 1826;1827 1530 1530 890 1 ERLDGENIYIR TEAWKKKRERLDGENI DGENIYIRHSNLMLED R E R I R H 0 2 1 1 0 0 2 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 11 1 1376.7048 Q4VB86;P11171 Q4VB86 410 420 EPB41 Protein 4.1 yes no 3 0.001533 86.114 By MS/MS By MS/MS 1 1 16345000 8448000 7897500 771 1257 830 1828;1829 1531;1532 1531 4267 2 ERPLQQVSPVASVPWR KEDAPQEKERPLQQVS PVASVPWRSHSFCKDR K E R W R S 1 2 0 0 0 2 1 0 0 0 1 0 0 0 3 2 0 1 0 3 0 0 16 1 1848.0006 Q9BY89 Q9BY89 1481 1496 KIAA1671 Uncharacterized protein KIAA1671 yes yes 3 0.0209 44.238 By matching By MS/MS 1 1 771830 252110 519720 772 1977 831 1830;1831 1533 1533 2809 1 ERPSSAIYPSDSFR LRSKTTIRERPSSAIY IYPSDSFRQSLLGSRR R E R F R Q 1 2 0 1 0 0 1 0 0 1 0 0 0 1 2 4 0 0 1 0 0 0 14 1 1610.7689 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 163 176 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2;3 0.00052867 83.106 By MS/MS By MS/MS 1 2 14158000 5237200 8921200 773 1870 832 1832;1833;1834 1534;1535;1536 1535 2641;2642 3 ERPTPSLNNNCTTSEDSLVLYNR NETSAPFKERPTPSLN DSLVLYNRVAVQGDVV K E R N R V 0 2 4 1 1 0 2 0 0 0 3 0 0 0 2 3 3 0 1 1 0 0 23 1 2679.2559 V9GYZ6;P07814 V9GYZ6 741 763 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 3 0.0069229 48.968 By matching By MS/MS 1 1 2307000 1001700 1305300 774 1233 833 1835;1836 1537 1537 1625 1 ERPTSPAPHRPPK SEPASPKRERPTSPAP PAPHRPPKRVK_____ R E R P K R 1 2 0 0 0 0 1 0 1 0 0 1 0 0 5 1 1 0 0 0 0 0 13 2 1468.7899 M0QZ09;Q8N6T7 M0QZ09 260 272 SIRT6 NAD-dependent protein deacetylase sirtuin-6 yes no 2 0.014274 57.434 By MS/MS 1 819850 0 819850 775 1065 834 1837 1538 1538 1400;3586 1 ERSDSGGSSSEPFDR HPSGLVPRERSDSGGS SSSEPFDRHAPAMLRE R E R D R H 0 2 0 2 0 0 2 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 15 1 1611.6761 P48634 P48634 757 771 PRRC2A Protein PRRC2A yes yes 2;3 0.0002386 89.506 By MS/MS By MS/MS 2 2 14854000 6991400 7862500 776 1373 835 1838;1839;1840;1841 1539;1540;1541;1542 1541 1823;1824 4 ERSPALKSPLQSVVVR AVSELSPRERSPALKS PLQSVVVRRRSPRPSP R E R V R R 1 2 0 0 0 1 1 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 16 2 1765.021 Q9Y2W1 Q9Y2W1 246 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0043909 66.436 By MS/MS By MS/MS 1 1 71038000 38494000 32544000 777 2146 836 1842;1843 1543;1544 1543 3116;3117 2 ERSPSPLR LLDTPRSRERSPSPLR ERSPSPLRGNVVPSPL R E R L R G 0 2 0 0 0 0 1 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 8 1 940.50903 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 28 35 CARHSP1 Calcium-regulated heat stable protein 1 yes no 2 0.017307 89.561 By MS/MS 1 3136700 0 3136700 778 913 837 1844 1545 1545 1221;1222 1 ERSPSPLRGNVVPSPLPTR LLDTPRSRERSPSPLR VPSPLPTRRTRTFSAT R E R T R R 0 3 1 0 0 0 1 1 0 0 2 0 0 0 5 3 1 0 0 2 0 0 19 2 2058.1334 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 28 46 CARHSP1 Calcium-regulated heat stable protein 1 yes no 3 0.022288 41.323 By matching By MS/MS 1 1 5863300 2385600 3477700 779 913 838 1845;1846 1546 1546 1221;1222;1223 1 ERTETLIPEMR QTEMTHRRERTETLIP ETLIPEMRTDTYTDEI R E R M R T 0 2 0 0 0 0 3 0 0 1 1 0 1 0 1 0 2 0 0 0 0 0 11 1 1373.6973 E9PF17;P13611 E9PF17 637 647 VCAN Versican core protein yes no 2 0.015135 50.354 By MS/MS 1 0 0 0 780 620 839 1847 1547 1547 75 3432 1 ERVTPPEGYEVVTVFPK IYCEKHARERVTPPEG EVVTVFPK________ R E R P K - 0 1 0 0 0 0 3 1 0 0 0 1 0 1 3 0 2 0 1 4 0 0 17 1 1946.0149 O00151 O00151 313 329 PDLIM1 PDZ and LIM domain protein 1 yes yes 3 6.6066E-06 97.095 By MS/MS By MS/MS 1 1 7787100 1241700 6545400 781 1077 840 1848;1849 1548;1549 1549 4222 2 ESCSSPSTVGSSLTTR TPQQQKCRESCSSPST VGSSLTTRKIDPPAVP R E S T R K 0 1 0 0 1 0 1 1 0 0 1 0 0 0 1 6 3 0 0 1 0 0 16 0 1654.7468 E9PMC9;Q7Z589;H0YEP9 E9PMC9 1111 1126 C11orf30;EMSY Protein EMSY yes no 2 0.003337 63.037 By MS/MS By matching 1 1 2633500 1220600 1412900 782 667 841 1850;1851 1550 1550 900 1 ESDQTLAALLSPK TEEPLPVKESDQTLAA LAALLSPKESSGGEKE K E S P K E 2 0 0 1 0 1 1 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 13 0 1371.7246 P18583;H7C1M2 P18583 1687 1699 SON Protein SON yes no 2 2.7403E-09 115.91 By MS/MS By MS/MS 1 1 2388900 1078900 1310000 783 1288 842 1852;1853 1551;1552;1553 1552 1691 3 ESEDKPEIEDVGSDEEEEK EEKEKEEKESEDKPEI GSDEEEEKKDGDKKKK K E S E K K 0 0 0 3 0 0 8 1 0 1 0 2 0 0 1 2 0 0 0 1 0 0 19 1 2191.9128 P07900 P07900 251 269 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 3 0.021024 42.941 By matching By MS/MS 1 1 28749000 14423000 14326000 784 1234 843 1854;1855 1554 1554 1629 1 ESEQESEEEILAQK NKGTKSLKESEQESEE EEEILAQKKEQREEEV K E S Q K K 1 0 0 0 0 2 6 0 0 1 1 1 0 0 0 2 0 0 0 0 0 0 14 0 1647.7475 Q9BW71 Q9BW71 222 235 HIRIP3 HIRA-interacting protein 3 yes yes 2 0.010493 57.149 By MS/MS By matching 1 1 1767600 804950 962600 785 1967 844 1856;1857 1555 1555 2784;2785 1 ESESAPGDFSLSVK HDGAFLIRESESAPGD GDFSLSVKFGNDVQHF R E S V K F 1 0 0 1 0 0 2 1 0 0 1 1 0 1 1 4 0 0 0 1 0 0 14 0 1451.678 P62993;J3KT38 P62993 87 100 GRB2 Growth factor receptor-bound protein 2 yes no 2 0.012338 58.274 By matching By MS/MS 1 1 7527500 5245200 2282300 786 1436 845 1858;1859 1556 1556 1 ESFGGSSEIVDQLEVEIR EKLVIQLKESFGGSSE DQLEVEIRNMTLLVEK K E S I R N 0 1 0 1 0 1 4 2 0 2 1 0 0 1 0 3 0 0 0 2 0 0 18 0 1992.964 Q6UX06 Q6UX06 175 192 OLFM4 Olfactomedin-4 yes yes 2 0.00088782 115.8 By MS/MS By MS/MS 2 2 19376000 11567000 7808800 787 1692 846 1860;1861;1862;1863 1557;1558;1559;1560 1559 3 ESKEEETSIDVAGKPNEVTK QKANEQKKESKEEETS GKPNEVTKAAESPDQK K E S T K A 1 0 1 1 0 0 5 1 0 1 0 3 0 0 1 2 2 0 0 2 0 0 20 2 2189.0699 P53985 P53985 460 479 SLC16A1 Monocarboxylate transporter 1 yes yes 3 1.9476E-70 148.2 By MS/MS By MS/MS 1 1 54224000 20946000 33278000 788 1406 847 1864;1865 1561;1562 1561 1899;3712 2 ESKVNGDDHHEEDMDMSD KGTGDSLRESKVNGDD EEDMDMSD________ R E S S D - 0 0 1 5 0 0 3 1 2 0 0 1 2 0 0 2 0 0 0 1 0 0 18 1 2088.7637 Q5T757;Q05519 Q5T757 407 424 SRSF11 Serine/arginine-rich splicing factor 11 yes no 3 0.019415 42.639 By MS/MS 1 0 0 0 789 1464 848 1866 1563 1563 197 1968 1 ESLKEEDESDDDNM EEAEKYAKESLKEEDE DESDDDNM________ K E S N M - 0 0 1 4 0 0 4 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 14 1 1654.6152 H0YJ03;G3V4X5;P25788 H0YJ03 70 83 PSMA3 Proteasome subunit alpha type-3 yes no 2 0 267.77 By MS/MS By MS/MS 1 2 231540000 105200000 126340000 790 800 849;850 1867;1868;1869 1564;1565;1566;1567 1564 98 1060 4 ESLTTDLQTRKEK PTQTIAVKESLTTDLQ DLQTRKEKDTPNENRQ K E S E K D 0 1 0 1 0 1 2 0 0 0 2 2 0 0 0 1 3 0 0 0 0 0 13 2 1547.8155 J3QQW9;Q15022 J3QQW9 381 393 SUZ12 Polycomb protein SUZ12 yes no 2 0.013018 54.608 By matching By MS/MS 1 1 2403000 1289800 1113200 791 1025 851 1870;1871 1568 1568 3565;3566 0 ESMPSLMEK LVREIRKKESMPSLME SMPSLMEKKLKRKDSL K E S E K K 0 0 0 0 0 0 2 0 0 0 1 1 2 0 1 2 0 0 0 0 0 0 9 0 1050.4726 Q99578 Q99578 185 193 RIT2 GTP-binding protein Rit2 yes yes 3 0.019045 41.876 By MS/MS 1 0 0 0 792 1941 852 1872 1569 1569 283 2749 1 ESNTPAPSTQGLPDSWGIIAEPR VNMDFTKRESNTPAPS WGIIAEPRQSAFSNYV R E S P R Q 2 1 1 1 0 1 2 2 0 2 1 0 0 0 4 3 2 1 0 0 0 0 23 0 2422.1765 O14654 O14654 930 952 IRS4 Insulin receptor substrate 4 yes yes 3 0.0043044 52.685 By MS/MS By matching 1 1 6487300 2253600 4233700 793 1094 853 1873;1874 1570 1570 1452;3595 1 ESNYFGLSPEER EDFDHTSRESNYFGLS FGLSPEERREKQAIEE R E S E R R 0 1 1 0 0 0 3 1 0 0 1 0 0 1 1 2 0 0 1 0 0 0 12 0 1426.6365 Q01804 Q01804 436 447 OTUD4 OTU domain-containing protein 4 yes yes 2 0.0024328 75.669 By matching By MS/MS 1 1 2139600 1031500 1108000 794 1452 854 1875;1876 1571 1571 1934 1 ESPGPIGLSTEK E S E K 0 0 0 0 0 0 2 2 0 1 1 1 0 0 2 2 1 0 0 0 0 0 12 0 1213.619 REV__E5RHI8 yes yes 2 0.011414 59.84 By MS/MS By matching 1 1 22810000 10305000 12505000 + 795 2195 855 1877;1878 1572;1573 1572 3183 2 ESRSPQQSAALPR PKAALEPKESRSPQQS QQSAALPRRYMLRERE K E S P R R 2 2 0 0 0 2 1 0 0 0 1 0 0 0 2 3 0 0 0 0 0 0 13 1 1425.7324 E5RJN3;A0A0A6YYG7;Q6IBW4 E5RJN3 247 259 NCAPH2 Condensin-2 complex subunit H2 yes no 2 0.011664 68.83 By MS/MS By matching 1 1 7842400 4447500 3395000 796 188 856 1879;1880 1574 1574 269;270 1 ESSANNSVSPSESLR HELDHRERESSANNSV VSPSESLRASEKHRGS R E S L R A 1 1 2 0 0 0 2 0 0 0 1 0 0 0 1 6 0 0 0 1 0 0 15 0 1562.7172 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726 H0YKH0 195 209 TLE3 Transducin-like enhancer protein 3 yes no 2 2.5106E-29 142.4 By MS/MS By MS/MS 1 1 28045000 14398000 13647000 797 722 857 1881;1882 1575;1576;1577 1577 960;961 3 ESSIIAPAPAEDVDTPPR QVYEFRVKESSIIAPA EDVDTPPRKKKRKHRL K E S P R K 3 1 0 2 0 0 2 0 0 2 0 0 0 0 4 2 1 0 0 1 0 0 18 0 1863.9214 Q15910 Q15910 473 490 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 2;3 0.004027 88.19 By MS/MS By MS/MS 1 2 9845500 1903500 7942000 798 1570 858 1883;1884;1885 1578;1579 1579 3771 2 ESSPLYSPTFSDSTSAVK DISPLTPRESSPLYSP SDSTSAVKEKTATCHS R E S V K E 1 0 0 1 0 0 1 0 0 0 1 1 0 1 2 6 2 0 1 1 0 0 18 0 1901.8895 P46821 P46821 1791 1808 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0073353 49.356 By MS/MS By matching 1 1 11704000 5522700 6180800 799 1367 859 1886;1887 1580 1580 4297 1 ESSPSHGLLK AEATTRSRESSPSHGL SPSHGLLKLGSGGVVK R E S L K L 0 0 0 0 0 0 1 1 1 0 2 1 0 0 1 3 0 0 0 0 0 0 10 0 1053.5455 Q96JH7 Q96JH7 996 1005 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 0.0018333 88.37 By MS/MS By MS/MS 1 1 2009500 833150 1176300 800 1902 860 1888;1889 1581;1582 1582 2685;2686 2 ESSQPDAFSSGGGSK QGATPSTKESSQPDAF FSSGGGSKPSYEAIPE K E S S K P 1 0 0 1 0 1 1 3 0 0 0 1 0 1 1 5 0 0 0 0 0 0 15 0 1439.6165 A0A0A0MSW3;P35658;E9PKD2;B7ZAV2;H0Y837 A0A0A0MSW3 677 691 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.019743 44.567 By MS/MS 1 0 0 0 801 168 861 1890 1583 1583 232;233;234 1 ESSTSEGADQKMSSPEDDSDTKR NEVPPAPKESSTSEGA EDDSDTKRLSKEEKGR K E S K R L 1 1 0 4 0 1 3 1 0 0 0 2 1 0 1 6 2 0 0 0 0 0 23 2 2486.0351 Q15424 Q15424 371 393 SAFB Scaffold attachment factor B1 yes yes 3 0.013859 51.264 By matching By MS/MS 1 1 2183900 888720 1295200 802 1556 862 1891;1892 1584 1584 2148 1 ESTESSNTTIEDEDVK LKKPDGVKESTESSNT TIEDEDVKARKQEIIK K E S V K A 0 0 1 2 0 0 4 0 0 1 0 1 0 0 0 3 3 0 0 1 0 0 16 0 1782.7643 H0Y9J2;D6R938;E9PBG7;E9PF82;Q13557 H0Y9J2 33 48 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 2 0.0028307 77.324 By MS/MS By matching 1 1 3815600 1517800 2297800 803 520 863 1893;1894 1585 1585 3391 1 ESTHQSEDVFLPSPR SYLSDNTRESTHQSED DVFLPSPRDCFPYNNY R E S P R D 0 1 0 1 0 1 2 0 1 0 1 0 0 1 2 3 1 0 0 1 0 0 15 0 1727.8115 A0A0A0MSK6;Q13017 A0A0A0MSK6 956 970 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 0.0010849 69.188 By MS/MS By MS/MS 1 1 1534900 609260 925640 804 165 864 1895;1896 1586;1587 1587 228 1 ESTSSKSPPR EMFETAIKESTSSKSP TSSKSPPRKINSSPNV K E S P R K 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 4 1 0 0 0 0 0 10 1 1074.5306 P78347 P78347 817 826 GTF2I General transcription factor II-I yes yes 2 4.5468E-13 143 By MS/MS By MS/MS 1 1 51065000 22266000 28799000 805 1442 865 1897;1898 1588;1589 1588 1919;1920 2 ESVPEFPLSPPK LILSPRSKESVPEFPL EFPLSPPKKKDLSLEE K E S P K K 0 0 0 0 0 0 2 0 0 0 1 1 0 1 4 2 0 0 0 1 0 0 12 0 1325.6867 A2A2D0;P16949 A2A2D0 30 41 STMN1 Stathmin yes no 2 1.8738E-39 158.86 By MS/MS By MS/MS 2 2 14963000 7394100 7569100 806 312 866 1899;1900;1901;1902 1590;1591;1592;1593;1594;1595;1596;1597;1598 1597 448 9 ESVPEFPLSPPKKK LILSPRSKESVPEFPL PLSPPKKKDLSLEEIQ K E S K K D 0 0 0 0 0 0 2 0 0 0 1 3 0 1 4 2 0 0 0 1 0 0 14 2 1581.8766 A2A2D0;P16949 A2A2D0 30 43 STMN1 Stathmin yes no 3 0.00036149 85.988 By MS/MS By MS/MS 1 1 7403800 4065400 3338400 807 312 867 1903;1904 1599;1600;1601 1599 448 3 ESWVSPR DLKQQSTRESWVSPRK RESWVSPRKRGLSSSE R E S P R K 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 2 0 1 0 1 0 0 7 0 859.41882 Q8IYH5 Q8IYH5 78 84 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.015318 89.029 By MS/MS By matching 1 1 1607200 735420 871750 808 1762 868 1905;1906 1602 1602 2478 1 ESYDAPPTPSGAR DGGETESRESYDAPPT PPTPSGARLIPDFPVA R E S A R L 2 1 0 1 0 0 1 1 0 0 0 0 0 0 3 2 1 0 1 0 0 0 13 0 1346.6103 Q96S55 Q96S55 109 121 WRNIP1 ATPase WRNIP1 yes yes 2 0.0012001 82.529 By matching By MS/MS 1 1 5876700 3297500 2579200 809 1928 869 1907;1908 1603 1603 3895 1 ESYEVSLTQK EELRNKNRESYEVSLT YEVSLTQKTDPSVRPM R E S Q K T 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 1 0 1 1 0 0 10 0 1182.5768 D6RDK6;D6RBN5;Q9NX40 D6RDK6 154 163 OCIAD1 OCIA domain-containing protein 1 yes no 2 0.0031964 74.173 By matching By MS/MS 1 1 1938100 686330 1251800 810 529 870 1909;1910 1604 1604 4135 1 ESYSVYVYK KKRKRSRKESYSVYVY SYSVYVYKVLKQVHPD K E S Y K V 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 3 2 0 0 9 0 1136.539 U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814 U3KQK0 36 44 HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K yes no 2 0.01252 75.738 By MS/MS By matching 1 1 3112700 1484100 1628600 811 1146 871 1911;1912 1605 1605 1 ETCSTLAESPR PTAPDITRETCSTLAE STLAESPRNGLQEKHK R E T P R N 1 1 0 0 1 0 2 0 0 0 1 0 0 0 1 2 2 0 0 0 0 0 11 0 1249.5609 Q6P2E9 Q6P2E9 836 846 EDC4 Enhancer of mRNA-decapping protein 4 yes yes 2 0.003427 79.886 By MS/MS By MS/MS 1 1 7526100 3395900 4130200 812 1677 872 1913;1914 1606;1607 1606 2347 2 ETEPLVSPHQDK KKSESPFRETEPLVSP LVSPHQDKLMSMPVMT R E T D K L 0 0 0 1 0 1 2 0 1 0 1 1 0 0 2 1 1 0 0 1 0 0 12 0 1378.6729 H7C3H4;H7BZ93;C9JG86;H7BXT4;Q9BYW2 H7C3H4 382 393 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.016411 66.989 By MS/MS 1 0 0 0 813 963 873 1915 1608 1608 1294 1 ETEQMYQSK SQTQCQKKETEQMYQS TEQMYQSKLKKYIAKQ K E T S K L 0 0 0 0 0 2 2 0 0 0 0 1 1 0 0 1 1 0 1 0 0 0 9 0 1142.4914 Q8IYA2 Q8IYA2 829 837 CCDC144CP Putative coiled-coil domain-containing protein 144C yes yes 1 0.011056 46.994 By MS/MS By matching 1 1 5847200 3691800 2155400 814 1761 874 1916;1917 1609 1609 432 2477 1 ETERASPIKMDLAPSK AKDVTLLKETERASPI KMDLAPSKDMGPPKEN K E T S K D 2 1 0 1 0 0 2 0 0 1 1 2 1 0 2 2 1 0 0 0 0 0 16 2 1771.9138 E7EVA0;P27816 E7EVA0 370 385 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0011619 84.249 By MS/MS By MS/MS 2 2 36996000 22645000 14350000 815 596 875;876 1918;1919;1920;1921 1610;1611;1612 1612 73 813;3425 3 ETPHSPGVEDAPIAK PAQLANARETPHSPGV VEDAPIAKVGVLAASM R E T A K V 2 0 0 1 0 0 2 1 1 1 0 1 0 0 3 1 1 0 0 1 0 0 15 0 1546.7627 F8VS07;F8VQE1;Q9UHB6 F8VS07 183 197 LIMA1 LIM domain and actin-binding protein 1 yes no 2;3 9.3999E-06 96.135 By MS/MS By MS/MS 2 2 146170000 74396000 71775000 816 733 877 1922;1923;1924;1925 1613;1614;1615;1616 1616 976;3479 4 ETPPNGNLSPAPR KGKLGGPKETPPNGNL GNLSPAPRLRRDYSYE K E T P R L 1 1 2 0 0 0 1 1 0 0 1 0 0 0 4 1 1 0 0 0 0 0 13 0 1348.6735 P48634 P48634 996 1008 PRRC2A Protein PRRC2A yes yes 2 0.00012032 101.72 By MS/MS By MS/MS 2 2 14977000 7602500 7374200 817 1373 878;879 1926;1927;1928;1929 1617;1618;1619;1620;1621 1617 194 1825;3699 5 ETQNYKRQAQADR EGPEYWDRETQNYKRQ KRQAQADRVSLRNLRG R E T D R V 2 2 1 1 0 3 1 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 13 2 1606.7812 A0A140T9U8;A0A140TA12;A0A140TA05;A0A140T9L3;O19617;A0A140T921;A0A140T9H5 A0A140T9U8 87 99 HLA-C yes no 2 0.016415 45.077 By MS/MS 1 0 0 0 818 283 880 1930 1622 1622 48 3313 1 ETQSPEQVKSEK SERITVKKETQSPEQV PEQVKSEKLKDLFDYS K E T E K L 0 0 0 0 0 2 3 0 0 0 0 2 0 0 1 2 1 0 0 1 0 0 12 1 1388.6783 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 493 504 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 2.6973E-112 187.78 By MS/MS By MS/MS 1 1 22297000 13130000 9166000 819 2073 881 1931;1932 1623;1624;1625;1626;1627 1627 2969;3945 5 ETRISFVEEDVHPK GRSPQRLKETRISFVE VEEDVHPKWIPGAADD K E T P K W 0 1 0 1 0 0 3 0 1 1 0 1 0 1 1 1 1 0 0 2 0 0 14 1 1684.842 Q8WYP5 Q8WYP5 1228 1241 AHCTF1 Protein ELYS yes yes 3 0.018792 63.614 By matching By MS/MS 1 1 4576500 1924200 2652200 820 1845 882 1933;1934 1628 1628 2596;3872 1 ETSAATLSPGASSR LEVSPGSRETSAATLS LSPGASSRGWDDGDTR R E T S R G 3 1 0 0 0 0 1 1 0 0 1 0 0 0 1 4 2 0 0 0 0 0 14 0 1333.6474 A0A087WTU3;Q9Y6I9 A0A087WTU3 163 176 TEX264 Testis-expressed sequence 264 protein yes no 2 0.00017421 81.992 By matching By MS/MS 1 1 4184100 2099600 2084500 821 33 883 1935;1936 1629 1629 36 1 ETSVSKEDTDHEEKASNEDVTK SDVEVEEKETSVSKED ASNEDVTKAVDITTPK K E T T K A 1 0 1 3 0 0 5 0 1 0 0 3 0 0 0 3 3 0 0 2 0 0 22 2 2477.1041 O75475 O75475 114 135 PSIP1 PC4 and SFRS1-interacting protein yes yes 3;4 0.0016172 74.744 By matching By MS/MS 1 2 28521000 5663900 22857000 822 1163 884 1937;1938;1939 1630;1631 1631 1549 2 ETVNSPAIYK TQKVKVKKETVNSPAI VNSPAIYKFQSRRKR_ K E T Y K F 1 0 1 0 0 0 1 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 10 0 1120.5764 Q9Y3A2 Q9Y3A2 237 246 UTP11L Probable U3 small nucleolar RNA-associated protein 11 yes yes 2 0.0046544 82.494 By MS/MS By MS/MS 1 1 3281100 1676000 1605100 823 2152 885 1940;1941 1632;1633 1632 3129 2 EVDEDSEPEREVR FVRVKREREVDEDSEP SEPEREVRAKNGRVDS R E V V R A 0 2 0 2 0 0 5 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 1 1587.7013 F8WC91;B9A018;Q53GS9 F8WC91 77 89 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 2 0.0014036 92.906 By MS/MS By MS/MS 1 1 25711000 13460000 12251000 824 422 886 1942;1943 1634;1635 1635 589 2 EVDEQMLNVQNK FRGRMSMKEVDEQMLN QMLNVQNKNSSYFVEW K E V N K N 0 0 2 1 0 2 2 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 12 0 1445.682 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 Q5JP53 307 318 TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain yes no 2 1.6871E-178 206.43 By MS/MS By MS/MS 2 2 12056000 4679900 7375900 825 1232 887;888 1944;1945;1946;1947 1636;1637;1638;1639 1637 150 4 EVDGLLTSEPMGSPVSSK EEPKGKEKEVDGLLTS MGSPVSSKTESVSDKE K E V S K T 0 0 0 1 0 0 2 2 0 0 2 1 1 0 2 4 1 0 0 2 0 0 18 0 1831.8873 H3BUF6;Q8WWM7 H3BUF6 588 605 ATXN2L Ataxin-2-like protein yes no 2 7.8031E-98 166.77 By matching By MS/MS 1 1 15405000 4928400 10476000 826 935 889 1948;1949 1640 1640 1252 1 EVDKTPPPQPPLISSMDSISQK MTGKRSTKEVDKTPPP SMDSISQKSQGDVEKA K E V Q K S 0 0 0 2 0 2 1 0 0 2 1 2 1 0 5 4 1 0 0 1 0 0 22 1 2393.2148 Q92625 Q92625 314 335 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 3 0.016586 42.123 By matching By MS/MS 1 1 3641100 2138600 1502600 827 1855 890 1950;1951 1641 1641 2613;2614;2615;2616;3874 1 EVDYSGLR EWKELEQKEVDYSGLR EVDYSGLRVQAMQISS K E V L R V 0 1 0 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 8 0 937.45051 Q9UKY7;H0Y8K3 Q9UKY7 92 99 CDV3 Protein CDV3 homolog yes no 2 0.0026989 101.28 By MS/MS By MS/MS 1 1 4182500 2244300 1938200 828 2116 891 1952;1953 1642;1643 1643 4458 2 EVEPEPTEDKDLEADEEDTR ETQPSETKEVEPEPTE EADEEDTRKKDASDDL K E V T R K 1 1 0 4 0 0 7 0 0 0 1 1 0 0 2 0 2 0 0 1 0 0 20 1 2345.003 P20042 P20042 43 62 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 0.015555 35.875 By MS/MS By matching 1 1 2183600 940150 1243400 829 1298 892 1954;1955 1644 1644 1 EVFEDAAEIR KVTQDELKEVFEDAAE FEDAAEIRLVSKDGKS K E V I R L 2 1 0 1 0 0 3 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 10 0 1177.5615 P19338;H7BY16 P19338 411 420 NCL Nucleolin yes no 2 0.0012747 106.68 By matching By MS/MS 1 1 2092200 926020 1166200 830 1294 893 1956;1957 1645 1645 1 EVGTPHGIILDSVDAAFICPGSSR GYPKRLEKEVGTPHGI FICPGSSRLHIMAGRR K E V S R L 2 1 0 2 1 0 1 3 1 3 1 0 0 1 2 3 1 0 0 2 0 0 24 0 2497.2271 P02790 P02790 348 371 HPX Hemopexin yes yes 3 0.02095 42.185 By MS/MS By matching 1 1 1887000 1243500 643500 831 1214 894 1958;1959 1646 1646 1 EVMESAVGNSSGSGQNEESPR AELERKLREVMESAVG GQNEESPRKRKKATEA R E V P R K 1 1 2 0 0 1 4 3 0 0 0 0 1 0 1 5 0 0 0 2 0 0 21 0 2149.9182 Q9NVF7 Q9NVF7 326 346 FBXO28 F-box only protein 28 yes yes 2 2.8697E-11 105.38 By matching By MS/MS 1 1 4712500 1751900 2960500 832 2059 895 1960;1961 1647 1647 2944 1 EVPIYANR VSPVTPPREVPIYANR EVPIYANRFAVPTYAA R E V N R F 1 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 1 1 0 0 8 0 960.50288 Q13443 Q13443 765 772 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes yes 2 0.01727 55.504 By MS/MS By matching 1 1 5392900 4643500 749350 833 1504 896 1962;1963 1648 1648 4345 1 EVPQAASKTHGLLQAVR SSREGGCREVPQAASK HGLLQAVRPQAQDKRP R E V V R P 3 1 0 0 0 2 1 1 1 0 2 1 0 0 1 1 1 0 0 2 0 0 17 1 1803.9955 Q658T7;A6NKC0;A6NIJ5 Q658T7 239 255 FAM90A2P;FAM90A7P;FAM90A20P Putative protein FAM90A2P;Putative protein FAM90A7P;Putative protein FAM90A20P yes no 4 0.0108 43.69 By MS/MS 1 814610 814610 0 834 330 897 1964 1649 1649 3322 1 EVPSKEEPSPVKAEVAEK TKPSVTEKEVPSKEEP VKAEVAEKQATDVKPK K E V E K Q 2 0 0 0 0 0 5 0 0 0 0 3 0 0 3 2 0 0 0 3 0 0 18 2 1952.0102 P46821;D6RA40;D6RA32 P46821 606 623 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 3 0.0036163 79.461 By MS/MS By MS/MS 1 1 7368300 3452400 3915900 835 1367 898 1965;1966 1650;1651 1651 1807 2 EVPWSPSAEK EARKQAEKEVPWSPSA PWSPSAEKASPQENGP K E V E K A 1 0 0 0 0 0 2 0 0 0 0 1 0 0 2 2 0 1 0 1 0 0 10 0 1128.5451 Q5JSZ5;Q5JT00 Q5JSZ5 552 561 PRRC2B Protein PRRC2B yes no 2 0.0070062 71.085 By MS/MS By matching 1 1 5354100 2392100 2962000 836 1607 899 1967;1968 1652;1653 1652 2231 2 EVQAEQPSSSSPR KEKEKADREVQAEQPS QPSSSSPRRKTVKEKD R E V P R R 1 1 0 0 0 2 2 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 13 0 1400.6532 Q9Y388 Q9Y388 178 190 RBMX2 RNA-binding motif protein, X-linked 2 yes yes 2 9.4034E-114 189.17 By MS/MS By MS/MS 1 1 5644100 2996300 2647800 837 2151 900 1969;1970 1654;1655;1656;1657;1658;1659 1657 3126;3127;3128 6 EVRSPTKAPHLQLIEGK VQDGDGRREVRSPTKA HLQLIEGKKNSLRVEG R E V G K K 1 1 0 0 0 1 2 1 1 1 2 2 0 0 2 1 1 0 0 1 0 0 17 2 1902.0687 O43491;H0Y5B0;E9PK52;E9PHY5;E9PII3 O43491 595 611 EPB41L2 Band 4.1-like protein 2 yes no 4 0.0056731 48.391 By MS/MS 1 5517800 5517800 0 838 1125 901 1971 1660 1660 3605 1 EVSNADISMGDVATLSVTVIGIPKPK GTGPIFIKEVSNADIS VIGIPKPKIQWFFNGV K E V P K I 2 0 1 2 0 0 1 2 0 3 1 2 1 0 2 3 2 0 0 4 0 0 26 1 2640.4044 A0A0A0MTS7;Q8WZ42;A0A0A0MRA3 A0A0A0MTS7 3825 3850 TTN Titin yes no 3 0.0096525 43.523 By matching By MS/MS 1 1 5831200 3548400 2282900 839 186 902 1972;1973 1661 1661 263;264;3281;3282 1 EVSSLEGSPPPCLGQEEAVCTK VPIIDGAKEVSSLEGS QEEAVCTKIQVQSSEA K E V T K I 1 0 0 0 2 1 4 2 0 0 2 1 0 0 3 3 1 0 0 2 0 0 22 0 2373.0828 Q02952 Q02952 1388 1409 AKAP12 A-kinase anchor protein 12 yes yes 3 0.0063467 49.528 By matching By MS/MS 1 1 1819800 869230 950580 840 1457 903 1974;1975 1662 1662 1948;1949;1950 1 EVTSDSGSIVVSGLTPGVEYVYTIQVLR SQGGEAPREVTSDSGS VYTIQVLRDGQERDAP R E V L R D 0 1 0 1 0 1 2 3 0 2 2 0 0 0 1 4 3 0 2 6 0 0 28 0 2967.5441 P02751 P02751 1130 1157 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 3 0.00068401 57.738 By MS/MS By MS/MS 2 2 25855000 11863000 13992000 841 1212 904 1976;1977;1978;1979 1663;1664;1665;1666 1666 3 EVYELLDSPGK KLYEGKTKEVYELLDS ELLDSPGKVLLQSKDQ K E V G K V 0 0 0 1 0 0 2 1 0 0 2 1 0 0 1 1 0 0 1 1 0 0 11 0 1248.6238 E9PBS1;P22234 E9PBS1 20 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 3.3947E-05 113.52 By MS/MS By MS/MS 2 2 9612100 4682700 4929300 842 609 905 1980;1981;1982;1983 1667;1668;1669;1670 1668 838;4147 4 EVYMTPLR QNEDEKNKEVYMTPLR EVYMTPLRGVKATQAS K E V L R G 0 1 0 0 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 1 0 0 8 0 1007.511 Q9BPX3 Q9BPX3 927 934 NCAPG Condensin complex subunit 3 yes yes 2 0.014718 58.917 By MS/MS By MS/MS 1 2 2557300 876790 1680500 843 1950 906;907 1984;1985;1986 1671;1672 1672 285 4426 2 EWFWDLATGTMK VLFFQGDREWFWDLAT DLATGTMKERSWPAVG R E W M K E 1 0 0 1 0 0 1 1 0 0 1 1 1 1 0 0 2 2 0 0 0 0 12 0 1483.6806 P02790;Q9BS19 P02790 167 178 HPX Hemopexin yes no 2 0.00045088 105.17 By MS/MS 1 2432400 2432400 0 844 1214 908 1987 1673 1673 145 1 EWNGVVSESDSPVK PPPKAALKEWNGVVSE SESDSPVKRPGRKAAR K E W V K R 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 3 0 1 0 3 0 0 14 0 1531.7155 M0R0Q7;P18858;M0QY71;M0R1G7;B4E135;F5GZ28 M0R0Q7 41 54 LIG1 DNA ligase;DNA ligase 1 yes no 2 4.6977E-06 102.28 By MS/MS By MS/MS 1 1 5631100 2866800 2764200 845 1073 909 1988;1989 1674;1675 1674 1414 2 EWVTQASGVWFAK IDTGIHSREWVTQASG ASGVWFAKKITQDYGQ R E W A K K 2 0 0 0 0 1 1 1 0 0 0 1 0 1 0 1 1 2 0 2 0 0 13 0 1507.746 C9JUZ4;C9JUF9;P15085 C9JUZ4 94 106 CPA1 Carboxypeptidase A1 yes no 2 2.1486E-06 109.42 By MS/MS By matching 1 1 668650 441520 227130 846 482 910 1990;1991 1676 1676 1 EYAENIGDGRSPEFR KIVRHIIKEYAENIGD DGRSPEFRENEQKRIL K E Y F R E 1 2 1 1 0 0 3 2 0 1 0 0 0 1 1 1 0 0 1 0 0 0 15 1 1738.7911 A0A087WUB9;Q8WYA6 A0A087WUB9 540 554 CTNNBL1 Beta-catenin-like protein 1 yes no 3 0.0022148 62.162 By MS/MS By MS/MS 1 1 2976100 1733700 1242400 847 39 911 1992;1993 1677;1678 1678 46 2 EYDQLYEEYTR QQYQDKSREYDQLYEE QLYEEYTRTSQGLLGS R E Y T R T 0 1 0 1 0 1 3 0 0 0 1 0 0 0 0 0 1 0 3 0 0 0 11 0 1507.6467 E9PFP1;O00459 E9PFP1 459 469 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta yes no 2 0.00092318 87.149 By matching By MS/MS 1 1 3431100 1658700 1772400 848 625 912 1994;1995 1679 1679 4151 1 EYEFCVRSVSEAGVGESSAATEPIRVK VPGLRTGKEYEFCVRS ATEPIRVKQALATPSA K E Y V K Q 3 2 0 0 1 0 5 2 0 1 0 1 0 1 1 4 1 0 1 4 0 0 27 2 2956.4237 Q5VTT5 Q5VTT5 668 694 MYOM3 Myomesin-3 yes yes 3 0.009412 40.937 By MS/MS 1 362630 0 362630 849 1646 913 1996 1680 1680 2302;2303;4371 1 EYFTFPASK IPTQTYTREYFTFPAS YFTFPASKSQDRMAPP R E Y S K S 1 0 0 0 0 0 1 0 0 0 0 1 0 2 1 1 1 0 1 0 0 0 9 0 1088.5179 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1188 1196 MLLT4 Afadin yes no 2 0.00052429 128.12 By MS/MS By MS/MS 1 1 10290000 5103200 5187000 850 338 914 1997;1998 1681;1682;1683;1684 1683 4070 4 EYGSPLK VGDFGLAREYGSPLKA REYGSPLKAYTPVVVT R E Y L K A 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 1 0 0 1 0 0 0 7 0 792.40177 Q5QPR4;J3QR29;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 Q5QPR4 537 543 CDK11A;CDK11B;CDC2L1 Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B yes no 2 0.021898 54.787 By matching By MS/MS 1 1 2961300 1259000 1702300 851 223 915 1999;2000 1685 1685 4035 1 EYIPGQPPLSQSSDSSPTR QYKEKTGKEYIPGQPP SSDSSPTRNSEPAGLE K E Y T R N 0 1 0 1 0 2 1 1 0 1 1 0 0 0 4 5 1 0 1 0 0 0 19 0 2044.9702 V9GYZ6;P07814 V9GYZ6 878 896 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2;3 2.1876E-10 106.31 By MS/MS By MS/MS 2 2 191490000 76202000 115280000 852 1233 916 2001;2002;2003;2004 1686;1687;1688;1689;1690;1691;1692;1693 1688 1626;1627;1628 8 EYIPGQPPLSQSSDSSPTRNSEPAGLETPEAK QYKEKTGKEYIPGQPP GLETPEAKVLFDKVAS K E Y A K V 2 1 1 1 0 2 4 2 0 1 2 1 0 0 6 6 2 0 1 0 0 0 32 1 3368.6008 V9GYZ6;P07814 V9GYZ6 878 909 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 3 6.5605E-08 62.683 By MS/MS 1 34450000 0 34450000 853 1233 917 2005 1694 1694 1626;1627;1628 1 EYVDCLTDKSAK EDLEEKLKEYVDCLTD CLTDKSAKTRQGALES K E Y A K T 1 0 0 2 1 0 1 0 0 0 1 2 0 0 0 1 1 0 1 1 0 0 12 1 1427.6602 A0A0R4J2F6;Q12894 A0A0R4J2F6 79 90 IFRD2 Interferon-related developmental regulator 2 yes no 2 0.0096082 62.823 By matching By MS/MS 1 1 2185300 1022000 1163300 854 258 918 2006;2007 1695 1695 4049 1 EYVQLISVYEK EKELSKVREYVQLISV QLISVYEKKLLNLTVR R E Y E K K 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 1 0 0 2 2 0 0 11 0 1369.7129 Q6UX06 Q6UX06 122 132 OLFM4 Olfactomedin-4 yes yes 2 0.0012354 101.11 By MS/MS By MS/MS 1 1 30847000 18215000 12632000 855 1692 919 2008;2009 1696;1697 1697 2 FADLSEAANR AEEWYKSKFADLSEAA DLSEAANRNNDALRQA K F A N R N 3 1 1 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1092.52 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 295 304 VIM Vimentin yes no 2 0.0077674 78.149 By MS/MS By MS/MS 1 1 2037100 1012200 1024900 856 1243 920 2010;2011 1698;1699 1699 2 FAEALITFVSDNSVLHR VNISCYAKFAEALITF SDNSVLHRLISGVMTS K F A H R L 2 1 1 1 0 0 1 0 1 1 2 0 0 2 0 2 1 0 0 2 0 0 17 0 1917.9949 Q8WWI5 Q8WWI5 187 203 SLC44A1 Choline transporter-like protein 1 yes yes 2 0.008756 54.471 By MS/MS 1 0 0 0 857 1839 921 2012 1700 1700 258 2587;3869 1 FAHTNVESLVNEYDDNGEGIILFR SNLRDNYRFAHTNVES GEGIILFRPSHLTNKF R F A F R P 1 1 3 2 0 0 3 2 1 2 2 0 0 2 0 1 1 0 1 2 0 0 24 0 2751.314 P30101 P30101 184 207 PDIA3 Protein disulfide-isomerase A3 yes yes 3 1.2952E-05 89.511 By MS/MS By MS/MS 1 1 14723000 8630400 6092400 858 1328 922 2013;2014 1701;1702 1701 2 FANLTPSR SEENFDGKFANLTPSR FANLTPSRTVPDSEAP K F A S R T 1 1 1 0 0 0 0 0 0 0 1 0 0 1 1 1 1 0 0 0 0 0 8 0 904.47667 F1T0I1;J3KNL6;O15027;A0A0C4DH09;X6RGP5 F1T0I1 2050 2057 SEC16A Protein transport protein Sec16A yes no 2 0.022048 88.134 By MS/MS By matching 1 1 1176200 866450 309700 859 685 923 2015;2016 1703 1703 3459 1 FASDDEHDEHDENGATGPVK QFQGKKTKFASDDEHD NGATGPVKRAREETDK K F A V K R 2 0 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 20 0 2168.8883 P05455 P05455 364 383 SSB Lupus La protein yes yes 3 0.0012227 80.596 By MS/MS By MS/MS 3 3 90190000 38020000 52170000 860 1222 924;925 2017;2018;2019;2020;2021;2022 1704;1705;1706;1707;1708 1705 163 1614 5 FASDDEHDEHDENGATGPVKR QFQGKKTKFASDDEHD GATGPVKRAREETDKE K F A K R A 2 1 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 21 1 2324.9894 P05455 P05455 364 384 SSB Lupus La protein yes yes 3;4 1.3443E-51 135.33 By MS/MS By MS/MS 7 6 975150000 498650000 476500000 861 1222 926;927 2023;2024;2025;2026;2027;2028;2029;2030;2031;2032;2033;2034;2035 1709;1710;1711;1712;1713;1714;1715;1716;1717;1718 1711 163 1614 10 FASENDLPEWK ________________ ENDLPEWKERGTGDVK R F A W K E 1 0 1 1 0 0 2 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 11 0 1334.6143 C9JIC6;C9JXG8;C9JJ34;C9JDM3;C9JGV6;F6WQW2;P43487 C9JIC6 8 18 RANBP1 Ran-specific GTPase-activating protein yes no 2 0.0058272 70.412 By matching By MS/MS 1 1 19389000 9989100 9399700 862 460 928 2036;2037 1719 1719 649 1 FASENDLPEWKER ________________ DLPEWKERGTGDVKLL R F A E R G 1 1 1 1 0 0 3 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 13 1 1619.758 C9JIC6;C9JXG8;C9JJ34;C9JDM3;C9JGV6;F6WQW2;P43487 C9JIC6 8 20 RANBP1 Ran-specific GTPase-activating protein yes no 3 0.0055033 60.157 By MS/MS By MS/MS 1 1 3047600 950890 2096700 863 460 929 2038;2039 1720;1721 1721 649 2 FAVPTYAAK EVPIYANRFAVPTYAA AVPTYAAKQPQQFPSR R F A A K Q 3 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 1 1 0 0 9 0 966.51747 Q13443;A0A0J9YY58 Q13443 773 781 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes no 2 0.0010651 104.44 By MS/MS By MS/MS 1 1 8958200 4776500 4181700 864 1504 930 2040;2041 1722;1723 1722 4346 2 FCDSPTSDLEMR RHDWAPPRFCDSPTSD PTSDLEMRNGRGRGKR R F C M R N 0 1 0 2 1 0 1 0 0 0 1 0 1 1 1 2 1 0 0 0 0 0 12 0 1456.5963 O15014 O15014 355 366 ZNF609 Zinc finger protein 609 yes yes 2 0.016983 56.122 By matching By MS/MS 1 1 966210 388630 577580 865 1099 931 2042;2043 1724 1724 1466 1 FCSSSCITAYKQNLFNK QIEGQSKKFCSSSCIT YKQNLFNKPTGMNSSV K F C N K P 1 0 2 0 2 1 0 0 0 1 1 2 0 2 0 3 1 0 1 0 0 0 17 1 2066.9554 H7C1I7 H7C1I7 261 277 ZMYM4 yes yes 2 0.0057251 47.971 By MS/MS 1 1002100 1002100 0 866 956 932 2044 1725 1725 136;395 1283;4206 1 FEDENFILK GKSIYGEKFEDENFIL EDENFILKHTGPGILS K F E L K H 0 0 1 1 0 0 2 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1153.5655 P62937;F8WE65;C9J5S7 P62937 83 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 2 0.019417 66.692 By matching By MS/MS 1 1 799370 419480 379900 867 1435 933 2045;2046 1726 1726 1 FEEESKEPVADEEEEDSDDDVEPITEFR LYVMVNAKFEEESKEP VEPITEFRFVPSDKSA K F E F R F 1 1 0 5 0 0 10 0 0 1 0 1 0 2 2 2 1 0 0 2 0 0 28 1 3313.3794 P54105;E9PJF4 P54105 86 113 CLNS1A Methylosome subunit pICln yes no 3 3.347E-07 83.435 By MS/MS 1 360450000 360450000 0 868 1408 934 2047 1727 1727 1901 1 FEELNADLFR YTSITRARFEELNADL ELNADLFRGTLDPVEK R F E F R G 1 1 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 10 0 1252.6088 E9PKE3;P11142;E9PN89;P54652;E9PNE6;A8K7Q2 E9PKE3 283 292 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 0.0081367 76.827 By MS/MS By matching 1 1 534980 238340 296640 869 654 935 2048;2049 1728 1728 1 FEPESPGFESR EFEPQSPRFEPESPGF ESPGFESRSPGLVPPS R F E S R S 0 1 0 0 0 0 3 1 0 0 0 0 0 2 2 2 0 0 0 0 0 0 11 0 1280.5673 H3BS42;Q9H5H4 H3BS42 48 58 ZNF768 Zinc finger protein 768 yes no 2 0.0017819 89.44 By MS/MS By MS/MS 1 1 10966000 5573100 5393200 870 928 936 2050;2051 1729;1730;1731 1730 1242 3 FERPMDYYEDLK NNVENLNRFERPMDYY MDYYEDLKMGMKFVSD R F E L K M 0 1 0 2 0 0 2 0 0 0 1 1 1 1 1 0 0 0 2 0 0 0 12 1 1604.7181 Q9NQS3 Q9NQS3 504 515 PVRL3 Nectin-3 yes yes 2 0.0088358 64.374 By matching By MS/MS 1 1 2221400 1024900 1196500 871 2040 937 2052;2053 1732 1732 4440;4441 1 FESPATGILSPR MYGPPALRFESPATGI ATGILSPRGDDYFNYN R F E P R G 1 1 0 0 0 0 1 1 0 1 1 0 0 1 2 2 1 0 0 0 0 0 12 0 1273.6667 P49792 P49792 946 957 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.002325 76.357 By MS/MS By MS/MS 1 2 3092300 1104800 1987500 872 1384 938 2054;2055;2056 1733;1734 1733 1864 1 FGEVVDCTLK DLKDYFSKFGEVVDCT EVVDCTLKLDPITGRS K F G L K L 0 0 0 1 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1166.5642 D6RAF8;Q14103;D6RD83;D6RF44;H0YA96;H0Y8G5;D6RBQ9 D6RAF8 120 129 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.0058001 72.879 By MS/MS 1 0 0 0 873 524 939 2057 1735 1735 1 FGEYNSNMSPEEK SNVFRDKRFGEYNSNM SNMSPEEKMMKRFALE R F G E K M 0 0 2 0 0 0 3 1 0 0 0 1 1 1 1 2 0 0 1 0 0 0 13 0 1530.6297 E9PFK5;P78316 E9PFK5 88 100 NOP14 Nucleolar protein 14 yes no 2 1.8849E-06 108.71 By MS/MS By MS/MS 2 2 23138000 11783000 11356000 874 624 940;941 2058;2059;2060;2061 1736;1737;1738 1738 76 849 3 FGNDVQHFK GDFSLSVKFGNDVQHF GNDVQHFKVLRDGAGK K F G F K V 0 0 1 1 0 1 0 1 1 0 0 1 0 2 0 0 0 0 0 1 0 0 9 0 1090.5196 P62993;J3KT38 P62993 101 109 GRB2 Growth factor receptor-bound protein 2 yes no 2;3 0.0018647 98.582 By MS/MS By MS/MS 2 1 6458400 5105700 1352700 875 1436 942 2062;2063;2064 1739;1740 1739 2 FGQAATMEGIGAIGGTPPAFNR LTPPTTERFGQAATME GTPPAFNRAAPGAEFA R F G N R A 4 1 1 0 0 1 1 5 0 2 0 0 1 2 2 0 2 0 0 0 0 0 22 0 2162.0579 Q15233 Q15233 435 456 NONO Non-POU domain-containing octamer-binding protein yes yes 3 0.0036523 60.621 By matching By MS/MS 1 1 5516600 387790 5128800 876 1548 943 2065;2066 1741 1741 221 3765 1 FGSTGSTPPVSPTPSER VASSGVVKFGSTGSTP VSPTPSERSLLSTGDE K F G E R S 0 1 0 0 0 0 1 2 0 0 0 0 0 1 4 4 3 0 0 1 0 0 17 0 1702.8162 E7ER32;A0A087X287;B0QY83;A0A087WU73;W0Z7M9;Q969V6 E7ER32 444 460 MKL1;mkl1 MKL/myocardin-like protein 1 yes no 2 0.0068825 69.379 By MS/MS By matching 1 1 12626000 5295100 7331200 877 38 944 2067;2068 1742 1742 45;3217 1 FHPEPYGLEDDQR GSSVDLHRFHPEPYGL YGLEDDQRSMGYDDLD R F H Q R S 0 1 0 2 0 1 2 1 1 0 1 0 0 1 2 0 0 0 1 0 0 0 13 0 1601.711 C9JZR2;O60716;E9PRE2 C9JZR2 275 287 CTNND1 Catenin delta-1 yes no 2;3 0.00022445 83.499 By MS/MS By MS/MS 2 1 4713800 3839400 874340 878 495 945 2069;2070;2071 1743;1744 1743 4121 2 FHSPSTTWSPNKDTPQEK KPRTRRSRFHSPSTTW NKDTPQEKKRPQSPSP R F H E K K 0 0 1 1 0 1 1 0 1 0 0 2 0 1 3 3 3 1 0 0 0 0 18 1 2085.9756 A0A0A0MTP7;F8VXG7;Q99590 A0A0A0MTP7 734 751 SCAF11 Protein SCAF11 yes no 3 0.0032382 68.173 By matching By MS/MS 1 1 8956600 4500800 4455800 879 183 946 2072;2073 1745 1745 256;257;258;3276;3277 1 FIAVGYVDDTQFVR RPGRGEPRFIAVGYVD VDDTQFVRFDSDAASP R F I V R F 1 1 0 2 0 1 0 1 0 1 0 0 0 2 0 0 1 0 1 3 0 0 14 0 1628.8199 A0A140T930;A0A140TA13;A0A140T953;P30685;P30498;P30495;P30491;P30490;P30484;P30464;P18465;P18464;P10319 A0A140TA13 46 59 HLA-B HLA class I histocompatibility antigen, B-35 alpha chain;HLA class I histocompatibility antigen, B-78 alpha chain;HLA class I histocompatibility antigen, B-56 alpha chain;HLA class I histocompatibility antigen, B-53 alpha chain;HLA class I histocompatibility antigen, B-52 alpha chain;HLA class I histocompatibility antigen, B-46 alpha chain;HLA class I histocompatibility antigen, B-15 alpha chain;HLA class I histocompatibility antigen, B-57 alpha chain;HLA class I histocompatibility antigen, B-51 alpha chain;HLA class I histocompatibility antigen, B-58 alpha chain no no 2 0.0044736 68.893 By MS/MS By MS/MS 1 1 1215800 699020 516770 880 279;281 947 2074;2075 1746;1747 1746 2 FIFNTVGGFDEISPAGIQVSFVQYSDEVK DNFNKVVKFIFNTVGG VQYSDEVKSEFKLNTY K F I V K S 1 0 1 2 0 2 2 3 0 3 0 1 0 4 1 3 1 0 1 4 0 0 29 0 3192.5655 D6RGG3;Q99715;A0A087X0A8 D6RGG3 2345 2373 COL12A1 Collagen alpha-1(XII) chain yes no 3 0.0065497 43.306 By matching By MS/MS 1 1 14198000 4212500 9986000 881 538 948 2076;2077 1748 1748 1 FIGQYGNGLK KKRLSTLKFIGQYGNG GQYGNGLKSGSMRIGK K F I L K S 0 0 1 0 0 1 0 3 0 1 1 1 0 1 0 0 0 0 1 0 0 0 10 0 1095.5713 Q86VD1 Q86VD1 95 104 MORC1 MORC family CW-type zinc finger protein 1 yes yes 2 0.0050888 64.207 By MS/MS 1 1222200 1222200 0 882 1730 949 2078 1749 1749 4383 1 FIHQQPQSSSPVYGSSAK QWQPSSSRFIHQQPQS PVYGSSAKTSSVSNPQ R F I A K T 1 0 0 0 0 3 0 1 1 1 0 1 0 1 2 5 0 0 1 1 0 0 18 0 1946.9486 F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023 F5H836 77 94 PXN Paxillin yes no 2 0.0051725 52.5 By matching By MS/MS 2 2 9696500 5255200 4441200 883 288 950;951 2079;2080;2081;2082 1750;1751 1750 409;4054 2 FINDYGTHYITSGSMGGIYEYILVIDK YNYGMYAKFINDYGTH EYILVIDKAKMESLGI K F I D K A 0 0 1 2 0 0 1 4 1 5 1 1 1 1 0 2 2 0 4 1 0 0 27 0 3068.4841 P07357 P07357 333 359 C8A Complement component C8 alpha chain yes yes 3 1.5534E-06 71.297 By MS/MS By MS/MS 1 1 19187000 10397000 8790300 884 1231 952 2083;2084 1752;1753;1754 1753 149 3 FIQELSGSSPK QQNTQLKRFIQELSGS ELSGSSPKRRRAEDKD R F I P K R 0 0 0 0 0 1 1 1 0 1 1 1 0 1 1 3 0 0 0 0 0 0 11 0 1191.6136 I3L254;Q01664 I3L254 56 66 TFAP4 Transcription factor AP-4 yes no 2 0.0016192 96.113 By MS/MS By MS/MS 1 1 20072000 9107300 10965000 885 983 953 2085;2086 1755;1756 1756 1319;1320 2 FIQELSGSSPKR QQNTQLKRFIQELSGS LSGSSPKRRRAEDKDE R F I K R R 0 1 0 0 0 1 1 1 0 1 1 1 0 1 1 3 0 0 0 0 0 0 12 1 1347.7147 I3L254;Q01664 I3L254 56 67 TFAP4 Transcription factor AP-4 yes no 3 0.019009 42.52 By MS/MS By matching 1 1 1830600 937500 893080 886 983 954 2087;2088 1757 1757 1319;1320 1 FITVGYVDDTLFVR RPGRGEPRFITVGYVD VDDTLFVRFDSDATSP R F I V R F 0 1 0 2 0 0 0 1 0 1 1 0 0 2 0 0 2 0 1 3 0 0 14 0 1643.8559 P30488;P30487;A0A140TA14;A0A140TA11;A0A140T9Y5;A0A140T997;Q04826;P30485;P30483;P30481;P30479;P03989 P30488 46 59 HLA-B HLA class I histocompatibility antigen, B-50 alpha chain;HLA class I histocompatibility antigen, B-49 alpha chain;HLA class I histocompatibility antigen, B-40 alpha chain;HLA class I histocompatibility antigen, B-47 alpha chain;HLA class I histocompatibility antigen, B-45 alpha chain;HLA class I histocompatibility antigen, B-44 alpha chain;HLA class I histocompatibility antigen, B-41 alpha chain;HLA class I histocompatibility antigen, B-27 alpha chain yes no 2 0.0020975 72.652 By MS/MS 1 697230 0 697230 887 1329 955 2089 1758 1758 1 FIYEAWQGVER PAHEENVRFIYEAWQG EAWQGVERDLRGQVPG R F I E R D 1 1 0 0 0 1 2 1 0 1 0 0 0 1 0 0 0 1 1 1 0 0 11 0 1396.6776 I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L2L5 34 44 FAM195B Protein FAM195B yes no 2 0.00010475 108.67 By MS/MS By MS/MS 1 1 2675100 1286400 1388700 888 471 956 2090;2091 1759;1760 1760 4111 2 FKDLGEENFK HKSEVAHRFKDLGEEN DLGEENFKALVLIAFA R F K F K A 0 0 1 1 0 0 2 1 0 0 1 2 0 2 0 0 0 0 0 0 0 0 10 1 1225.5979 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;C9JKR2;A0A087WWT3;H7C013 A0A0C4DGB6 35 44 ALB Serum albumin yes no 3 0.0094716 55.721 By MS/MS By matching 1 1 784280 490700 293590 + 889 209 957 2092;2093 1761 1761 1 FLASVSTVLTSK AVHASLDKFLASVSTV VSTVLTSKYR______ K F L S K Y 1 0 0 0 0 0 0 0 0 0 2 1 0 1 0 3 2 0 0 2 0 0 12 0 1251.7075 G3V1N2;P69905 G3V1N2 97 108 HBA2;HBA1 Hemoglobin subunit alpha yes no 2 3.958E-08 99.568 By MS/MS By MS/MS 1 1 4017500 1179300 2838200 890 781 958 2094;2095 1762;1763 1763 1 FLEESVSMSPEER ESGSTLKKFLEESVSM VSMSPEERARYLENYD K F L E R A 0 1 0 0 0 0 4 0 0 0 1 0 1 1 1 3 0 0 0 1 0 0 13 0 1538.6923 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 86 98 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes no 2 0.00109 79.614 By matching By MS/MS 1 1 1084700 591220 493460 891 25 959 2096;2097 1764 1764 8 25 1 FLICTDVAAR RFKKGDVRFLICTDVA ICTDVAARGIDIHGVP R F L A R G 2 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 10 0 1164.5961 F1T0B3;A0A087X2G1;Q92499 F1T0B3 487 496 DDX1 ATP-dependent RNA helicase DDX1 yes no 3 0.015206 47.198 By MS/MS 1 0 0 0 892 117 960 2098 1765 1765 3247 1 FLIPNASQAESK DVLSLLEKFLIPNASQ NASQAESKVFYLKMKG K F L S K V 2 0 1 0 0 1 1 0 0 1 1 1 0 1 1 2 0 0 0 0 0 0 12 0 1303.6772 E7ESK7;E7EX29;P63104;B0AZS6 E7ESK7 104 115 YWHAZ 14-3-3 protein zeta/delta yes no 2 0.01894 47.603 By MS/MS 1 0 0 0 893 587 961 2099 1766 1766 92 781;782 1 FLKSEMPPVQFK GVTEAVLKFLKSEMPP EMPPVQFKLLGTLRML K F L F K L 0 0 0 0 0 1 1 0 0 0 1 2 1 2 2 1 0 0 0 1 0 0 12 1 1449.769 H0Y8M2;P52306 H0Y8M2 220 231 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 2 0.01988 60.301 By MS/MS 1 5959700 0 5959700 894 854 962 2100 1767 1767 1150 0 FLLADNLYCK STNSMETRFLLADNLY LADNLYCKASVPPTDK R F L C K A 1 0 1 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 10 0 1255.6271 B4DWR3;P61758 B4DWR3 100 109 VBP1 Prefoldin subunit 3 yes no 2 0.0034763 68.735 By MS/MS 1 790760 790760 0 895 385 963 2101 1768 1768 4094 1 FLLGPPQGGSPR ASPPHPCRFLLGPPQG PPQGGSPRGSHHTSGS R F L P R G 0 1 0 0 0 1 0 3 0 0 2 0 0 1 3 1 0 0 0 0 0 0 12 0 1224.6615 Q8IY92 Q8IY92 1035 1046 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2 0.016918 67.952 By MS/MS 1 0 0 0 896 1760 964 2102 1769 1769 2475 1 FLLYTNENPNNFQEVAADSSSISGSNFK SPKDVNTRFLLYTNEN SISGSNFKTNRKTRFI R F L F K T 2 0 5 1 0 1 2 1 0 1 2 1 0 3 1 5 1 0 1 1 0 0 28 0 3092.4363 P16233 P16233 55 82 PNLIP Pancreatic triacylglycerol lipase yes yes 3 0.0072104 26.187 By MS/MS By matching 1 1 3924700 1926100 1998600 897 1276 965 2103;2104 1770 1770 1 FLMECRNSPVTK TRIIYDRKFLMECRNS CRNSPVTKTPPRDLPT K F L T K T 0 1 1 0 1 0 1 0 0 0 1 1 1 1 1 1 1 0 0 1 0 0 12 1 1480.7167 Q13541 Q13541 58 69 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 2 0.0023232 96.756 By matching By MS/MS 1 2 13439000 2632000 10807000 898 1506 966;967 2105;2106;2107 1771;1772 1772 209 2065 2 FLNSSEFCSKKFCQGDK ________________ KKFCQGDKSRKIGLEQ K F L D K S 0 0 1 1 2 1 1 1 0 0 1 3 0 3 0 3 0 0 0 0 0 0 17 2 2080.9346 H7C5S8;H7C4R3 H7C5S8 5 21 PAQR9 yes no 3 0.016646 46.964 By matching By MS/MS 1 1 1226900 694950 531910 899 970 968 2108;2109 1773 1773 138 1300;1301 0 FLRNYIKSSAHTLR CDLHPLARFLRNYIKS KSSAHTLRNAKDLNCQ R F L L R N 1 2 1 0 0 0 0 0 1 1 2 1 0 1 0 2 1 0 1 0 0 0 14 2 1704.9424 A6NM62 A6NM62 228 241 LRRC53 Leucine-rich repeat-containing protein 53 yes yes 3 0.011629 42.277 By matching By MS/MS 1 1 1552700 770580 782160 900 331 969 2110;2111 1774 1774 55 469;470;3323;4062 1 FLSHSTDSLNK ENMSNTWKFLSHSTDS HSTDSLNKISKVNEST K F L N K I 0 0 1 1 0 0 0 0 1 0 2 1 0 1 0 3 1 0 0 0 0 0 11 0 1247.6146 A0A087WTD7;A8MYJ1;Q12802;A0A087WY36 A0A087WTD7 541 551 AKAP13 A-kinase anchor protein 13 yes no 2 0.00076747 102.73 By MS/MS By matching 1 1 5995300 2651300 3344000 901 26 970 2112;2113 1775 1775 26 1 FNALQYLR IPDEYFKRFNALQYLR FNALQYLRLSHNELAD R F N L R L 1 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 8 0 1023.5502 P51884 P51884 228 235 LUM Lumican yes yes 2 0.0068273 114.72 By MS/MS 1 1651200 1651200 0 902 1397 971 2114 1776 1776 1 FNEENYGVK WDPNEMFKFNEENYGV NEENYGVKTTYDSSLS K F N V K T 0 0 2 0 0 0 2 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 9 0 1098.4982 H3BUF6;Q8WWM7;H3BSK9 H3BUF6 259 267 ATXN2L Ataxin-2-like protein yes no 2 0.001147 110.31 By MS/MS By matching 1 1 1357200 754830 602390 903 935 972 2115;2116 1777 1777 4200 1 FNGGHSPTHSPEK PGRRLPGRFNGGHSPT SPTHSPEKILKLPKEE R F N E K I 0 0 1 0 0 0 1 2 2 0 0 1 0 1 2 2 1 0 0 0 0 0 13 0 1393.6375 Q9Y5K6 Q9Y5K6 505 517 CD2AP CD2-associated protein yes yes 2 0.019834 53.211 By MS/MS By matching 1 1 1950500 1056800 893650 904 2168 973 2117;2118 1778 1778 3149 1 FNSLNELVDYHR KYFLWVVKFNSLNELV NELVDYHRSTSVSRNQ K F N H R S 0 1 2 1 0 0 1 0 1 0 2 0 0 1 0 1 0 0 1 1 0 0 12 0 1505.7263 P62993 P62993 125 136 GRB2 Growth factor receptor-bound protein 2 yes yes 2;3 9.2713E-09 121.6 By MS/MS By matching 2 2 7393500 4694700 2698800 905 1436 974 2119;2120;2121;2122 1779;1780 1779 2 FNTYVTLK KFQGSPDKFNTYVTLK FNTYVTLKVQNVKSTT K F N L K V 0 0 1 0 0 0 0 0 0 0 1 1 0 1 0 0 2 0 1 1 0 0 8 0 984.52803 A0A0U1RRL2;B1AM27;F8VZH8;F8W0P6;F8W059;A0A1B0GUS7;O14795;Q9UPW8 A0A0U1RRL2 20 27 UNC13B;UNC13A Protein unc-13 homolog B;Protein unc-13 homolog A yes no 2 0.013133 56.721 By MS/MS 1 0 0 0 906 277 975 2123 1781 1781 3309;4053 1 FQDVGPQAPVGSVYQK SFHKESGRFQDVGPQA PVGSVYQKTNAVSEIK R F Q Q K T 1 0 0 1 0 3 0 2 0 0 0 1 0 1 2 1 0 0 1 3 0 0 16 0 1718.8628 H0Y5J4;B4DDD6;Q9UJU6 H0Y5J4 78 93 DBNL Drebrin-like protein yes no 2;3 1.9163E-37 142.39 By MS/MS By MS/MS 2 2 17093000 7886300 9206500 907 369 976 2124;2125;2126;2127 1782;1783;1784;1785 1782 4085 4 FQEQECPPSPEPTR ELVRVIRKFQEQECPP PPSPEPTRKEKDKKGC K F Q T R K 0 1 0 0 1 2 3 0 0 0 0 0 0 1 4 1 1 0 0 0 0 0 14 0 1700.7464 P62070 P62070 178 191 RRAS2 Ras-related protein R-Ras2 yes yes 2 0.0038254 67.846 By matching By MS/MS 1 1 7069100 3405300 3663800 908 1425 977 2128;2129 1786 1786 1916 1 FQEQECPPSPEPTRK ELVRVIRKFQEQECPP PSPEPTRKEKDKKGCH K F Q R K E 0 1 0 0 1 2 3 0 0 0 0 1 0 1 4 1 1 0 0 0 0 0 15 1 1828.8414 P62070 P62070 178 192 RRAS2 Ras-related protein R-Ras2 yes yes 2;3 0.00024426 73.688 By MS/MS By MS/MS 2 2 10558000 4967500 5590700 909 1425 978 2130;2131;2132;2133 1787;1788;1789 1787 1916 2 FQETEFLSPPR QKRIDQSKFQETEFLS TEFLSPPRKVPRLSEK K F Q P R K 0 1 0 0 0 1 2 0 0 0 1 0 0 2 2 1 1 0 0 0 0 0 11 0 1349.6616 P42166 P42166 417 427 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.0070395 84.605 By MS/MS 1 811650 0 811650 910 1354 979 2134 1790;1791;1792 1792 3685 3 FQNALLVR FEQLGEYKFQNALLVR FQNALLVRYTKKVPQV K F Q V R Y 1 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 8 0 959.55525 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 427 434 ALB Serum albumin yes no 2 0.019529 80.462 By MS/MS By MS/MS 1 1 3476100 2070400 1405600 + 911 209 980 2135;2136 1793;1794 1793 2 FQSEEQQQTEDELQDK RINKKIEKFQSEEQQQ TEDELQDKIHPFAQTQ K F Q D K I 0 0 0 2 0 5 4 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 16 0 1980.8549 CON__P02666 CON__P02666 33 48 yes yes 2;3 0 234.82 By MS/MS By MS/MS 2 2 18083000 9699300 8384000 + 912 502 981 2137;2138;2139;2140 1795;1796;1797;1798;1799 1796 689 5 FQSPQIQATISPPLQPK QQPKSRPKFQSPQIQA ISPPLQPKTKTYEEDP K F Q P K T 1 0 0 0 0 4 0 0 0 2 1 1 0 1 4 2 1 0 0 0 0 0 17 0 1879.0203 A0A087WYN9;Q7Z478 A0A087WYN9 190 206 DHX29 ATP-dependent RNA helicase DHX29 yes no 2;3 0.00090064 74.703 By MS/MS 2 5746100 0 5746100 913 84 982 2141;2142 1800;1801 1801 104 2 FQTGNKSPEVLR RERDVDLRFQTGNKSP NKSPEVLRAFDVPDAE R F Q L R A 0 1 1 0 0 1 1 1 0 0 1 1 0 1 1 1 1 0 0 1 0 0 12 1 1374.7256 Q96S66 Q96S66 432 443 CLCC1 Chloride channel CLIC-like protein 1 yes yes 3 0.0010234 79.804 By MS/MS By MS/MS 1 1 12454000 6353000 6100800 914 1929 983 2143;2144 1802;1803 1802 2723 2 FSAHYDAVEAELK MKSNIDKKFSAHYDAV DAVEAELKSSTVGLVT K F S L K S 3 0 0 1 0 0 2 0 1 0 1 1 0 1 0 1 0 0 1 1 0 0 13 0 1478.7042 B0S8I6;Q9Y247;Q14320 B0S8I6 9 21 FAM50A;FAM50B Protein FAM50B;Protein FAM50A yes no 2 1.0528E-06 107.83 By MS/MS By MS/MS 1 1 4074100 1788900 2285200 915 352 984 2145;2146 1804;1805 1804 4079 2 FSAQEIKTGLK NKTSVSAKFSAQEIKT QEIKTGLKEVVTAVEE K F S L K E 1 0 0 0 0 1 1 1 0 1 1 2 0 1 0 1 1 0 0 0 0 0 11 1 1220.6765 Q5RHP9 Q5RHP9 456 466 ERICH3 Glutamate-rich protein 3 yes yes 3 0.013021 46.844 By MS/MS 1 0 0 0 916 1615 985 2147 1806 1806 3789 1 FSDQAGPAIPTSNSYSK SANPKQRRFSDQAGPA PTSNSYSKKTQSNNAE R F S S K K 2 0 1 1 0 1 0 1 0 1 0 1 0 1 2 4 1 0 1 0 0 0 17 0 1768.8268 E7ETY4;E9PC69 E7ETY4 375 391 MARK2 yes no 2 0.0035051 61.524 By MS/MS By MS/MS 1 1 4445600 2117700 2327900 917 592 986 2148;2149 1807;1808 1808 802;803 2 FSDQAGPAIPTSNSYSKK SANPKQRRFSDQAGPA TSNSYSKKTQSNNAEN R F S K K T 2 0 1 1 0 1 0 1 0 1 0 2 0 1 2 4 1 0 1 0 0 0 18 1 1896.9218 E7ETY4;E9PC69 E7ETY4 375 392 MARK2 yes no 3 0.013772 41.798 By MS/MS 1 1340600 0 1340600 918 592 987 2150 1809 1809 802;803 1 FSFYGNLSPR LVEEGRRKFSFYGNLS FYGNLSPRRSLYRTLS K F S P R R 0 1 1 0 0 0 0 1 0 0 1 0 0 2 1 2 0 0 1 0 0 0 10 0 1186.5771 Q9P2F8 Q9P2F8 1471 1480 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 2 0.02006 57.175 By matching By MS/MS 1 1 382320 149470 232840 919 2089 988 2151;2152 1810 1810 2994 1 FSGFSAKPNNSGEAPSSPTPK VTSTNPRKFSGFSAKP APSSPTPKRSLSSSKC K F S P K R 2 0 2 0 0 0 1 2 0 0 0 2 0 2 4 5 1 0 0 0 0 0 21 1 2106.0018 P49916;K7ENR9;K7ERZ5 P49916 226 246 LIG3 DNA ligase 3 yes no 3 0.00099144 85.087 By MS/MS By MS/MS 1 1 3390300 1499800 1890500 920 1387 989 2153;2154 1811;1812 1811 1868;1869 2 FSGGFGAR RGRSKSSRFSGGFGAR FSGGFGARDYRQSSGA R F S A R D 1 1 0 0 0 0 0 3 0 0 0 0 0 2 0 1 0 0 0 0 0 0 8 0 797.38204 A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O00571;A0A087WVZ1;A0A0J9YVQ7;O15523 A0A0D9SFB3 593 600 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.012692 82.645 By matching By MS/MS 1 1 14114000 6272100 7841700 921 229 990 2155;2156 1813 1813 332 1 FSGSGSGTDFTLK RFSGVPDRFSGSGSGT SGTDFTLKISRVEAED R F S L K I 0 0 0 1 0 0 0 3 0 0 1 1 0 2 0 3 2 0 0 0 0 0 13 0 1302.6092 A2NJV5;A0A0A0MRZ7;A0A075B6S2;A0A087X0Q4;A0A075B6S6;A0A075B6P5;A0A087WW87;P06310;P01615;P01614 A2NJV5 87 99 IGKV A18;IGKV2D-26;IGKV2D-29;IGKV2-40;IGKV2D-30;IGKV2D-28 Ig kappa chain V-II region RPMI 6410;Ig kappa chain V-II region FR;Ig kappa chain V-II region Cum yes no 2 7.7842E-22 144.17 By MS/MS By MS/MS 1 1 63645000 39885000 23761000 922 9 991 2157;2158 1814;1815;1816 1814 3 FSGVPDR LIYEVSSRFSGVPDRF RFSGVPDRFSGSGSGT R F S D R F 0 1 0 1 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 1 0 0 7 0 776.3817 A2NJV5;A0A0A0MRZ7;A0A075B6S2;A0A0C4DH68;A0A075B6R9 A2NJV5 80 86 IGKV A18;IGKV2D-26;IGKV2D-29;IGKV2-24;IGKV2D-24 yes no 2 0.0075758 124.89 By MS/MS By matching 1 1 14441000 10031000 4409700 923 9 992 2159;2160 1817 1817 1 FSILTVNNDITLLK AKVFKNPKFSILTVNN NNDITLLKLATPARFS K F S L K L 0 0 2 1 0 0 0 0 0 2 3 1 0 1 0 1 2 0 0 1 0 0 14 0 1589.9029 H3BTQ4;H3BP92;H3BMY1;J3QKZ2;Q6GPI1;P17538 H3BTQ4 60 73 CTRB2;CTRB1 Chymotrypsinogen B2;Chymotrypsin B2 chain A;Chymotrypsin B2 chain B;Chymotrypsin B2 chain C;Chymotrypsinogen B;Chymotrypsin B chain A;Chymotrypsin B chain B;Chymotrypsin B chain C yes no 2 0.012842 57.885 By MS/MS By matching 1 1 3311600 1850100 1461500 924 909 993 2161;2162 1818 1818 1 FSKEEPVSSGPEEAVGK SGSKKKRKFSKEEPVS GPEEAVGKSSSKKKKK K F S G K S 1 0 0 0 0 0 4 2 0 0 0 2 0 1 2 3 0 0 0 2 0 0 17 1 1775.8578 O00567 O00567 562 578 NOP56 Nucleolar protein 56 yes yes 2;3 3.9721E-25 132.51 By MS/MS By MS/MS 3 3 31225000 17662000 13563000 925 1088 994;995 2163;2164;2165;2166;2167;2168 1819;1820;1821;1822;1823 1819 1429;1430;1431 5 FSLCSDNLEGISEGPSNR GKPDKTLRFSLCSDNL ISEGPSNRSNSVSSLD R F S N R S 0 1 2 1 1 0 2 2 0 1 2 0 0 1 1 4 0 0 0 0 0 0 18 0 1980.8847 H0Y7I9;C9IZ08;Q14C86;B4DGD8;A0A0A0MQV8 H0Y7I9 428 445 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2 0.006928 55.196 By matching By MS/MS 1 1 1988100 930610 1057500 926 428 996 2169;2170 1824 1824 606 1 FSLSPSLGPQASR SPCPPQRRFSLSPSLG SLGPQASRFLPSARSS R F S S R F 1 1 0 0 0 1 0 1 0 0 2 0 0 1 2 4 0 0 0 0 0 0 13 0 1345.699 Q9NYF3 Q9NYF3 231 243 FAM53C Protein FAM53C yes yes 2 0.00069223 88.282 By MS/MS By MS/MS 1 1 2568600 1349700 1218900 927 2072 997 2171;2172 1825;1826 1826 2962;2963 2 FSPDSQYIDNR KNNYYSSRFSPDSQYI DSQYIDNRSVNSAGLH R F S N R S 0 1 1 2 0 1 0 0 0 1 0 0 0 1 1 2 0 0 1 0 0 0 11 0 1340.5997 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8 Q5VWV2 338 348 PARD3 Partitioning defective 3 homolog yes no 2 9.0691E-05 109.44 By MS/MS By MS/MS 1 1 10316000 5552500 4763200 928 1654 998 2173;2174 1827;1828 1827 4375 2 FSPPSPPGK TPTVAKHKFSPPSPPG SPPSPPGKPVVTDITE K F S G K P 0 0 0 0 0 0 0 1 0 0 0 1 0 1 4 2 0 0 0 0 0 0 9 0 912.47052 A0A0A0MTS7;Q8WZ42;A0A0A0MRA3 A0A0A0MTS7 20269 20277 TTN Titin yes no 2 0.014308 67.113 By MS/MS By MS/MS 1 1 3679200 1798100 1881100 929 186 999 2175;2176 1829;1830 1830 265 2 FSPRPLKFTEK QWDLESLKFSPRPLKF RPLKFTEKPRPGVQML K F S E K P 0 1 0 0 0 0 1 0 0 0 1 2 0 2 2 1 1 0 0 0 0 0 11 2 1348.7503 H0Y4A7;H0Y4R9;H0Y500;H0Y5I9;H0Y463;Q9NSI6 H0Y4A7 22 32 BRWD1 Bromodomain and WD repeat-containing protein 1 yes no 2 0.022091 57.859 By MS/MS By matching 1 1 1215500 656800 558670 930 823 1000 2177;2178 1831 1831 3505 0 FSQAMEVETGKPR RTSAGCGRFSQAMEVE EVETGKPRPRYDTRTI R F S P R P 1 1 0 0 0 1 2 1 0 0 0 1 1 1 1 1 1 0 0 1 0 0 13 1 1478.7188 P29322 P29322 523 535 EPHA8 Ephrin type-A receptor 8 yes yes 3 0.02204 40.962 By MS/MS 1 761280 761280 0 931 1323 1001 2179 1832 1832 1739;3674 0 FSTYSQSPPDTPSLR KASTVTKRFSTYSQSP PPDTPSLREQAFYNML R F S L R E 0 1 0 1 0 1 0 0 0 0 1 0 0 1 3 4 2 0 1 0 0 0 15 0 1681.7948 H3BMG9;H3BSV5;A0A0A0MTL6;Q6ZS17 H3BMG9 304 318 FAM65A Protein FAM65A yes no 2 0.018459 50.843 By matching By MS/MS 1 1 1656200 958610 697640 932 180 1002 2180;2181 1833 1833 255 1 FSYANVAWQDIDFAVDENGLWVIYSTEASTGNMVISK PNAAYNNRFSYANVAW TGNMVISKLNDTTLQV R F S S K L 4 0 3 3 0 1 2 2 0 3 1 1 1 2 0 4 2 2 2 4 0 0 37 0 4139.9463 Q6UX06 Q6UX06 373 409 OLFM4 Olfactomedin-4 yes yes 4 0.018127 42.139 By matching By MS/MS 1 1 5137400 3022500 2115000 933 1692 1003 2182;2183 1834 1834 248 1 FTDKDQQPSGSEGEDDDAEAALKK DDMYGPEKFTDKDQQP DAEAALKKEVGDIKAS K F T K K E 3 0 0 5 0 2 3 2 0 0 1 3 0 1 1 2 1 0 0 0 0 0 24 2 2580.1463 H3BNW0;Q9NXG2 H3BNW0 78 101 THUMPD1 THUMP domain-containing protein 1 yes no 3 1.0238E-05 92.551 By MS/MS By MS/MS 1 1 38782000 18301000 20482000 934 914 1004 2184;2185 1835;1836 1836 1224;1225 2 FTEYSMTSSVMR WSEETKSRFTEYSMTS SMTSSVMRRNEQLTLH R F T M R R 0 1 0 0 0 0 1 0 0 0 0 0 2 1 0 3 2 0 1 1 0 0 12 0 1437.6268 A0A075B6Q4;Q96GA3 A0A075B6Q4 64 75 LTV1 Protein LTV1 homolog yes no 2 3.9702E-09 120.63 By MS/MS By MS/MS 2 3 6177900 1654400 4523500 935 8 1005;1006 2186;2187;2188;2189;2190 1837;1838;1839;1840;1841;1842;1843 1838 2;3 8;3204;3998 7 FTGLSKEELLK KEAAAAAKFTGLSKEE LSKEELLKVAGSPGWV K F T L K V 0 0 0 0 0 0 2 1 0 0 3 2 0 1 0 1 1 0 0 0 0 0 11 1 1263.7075 F5GZR9;F5H867;F5H0E2;H0YFS2;F5GZS6;J3KPF3;P08195 F5GZR9 18 28 SLC3A2 4F2 cell-surface antigen heavy chain yes no 2 0.021644 64.224 By matching By MS/MS 1 1 868690 413090 455600 936 707 1007 2191;2192 1844 1844 944 1 FVAFSGEGQSLR EEDEAGGRFVAFSGEG SGEGQSLRKKGRKP__ R F V L R K 1 1 0 0 0 1 1 2 0 0 1 0 0 2 0 2 0 0 0 1 0 0 12 0 1296.6463 Q92890 Q92890 290 301 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 0.0013668 88.101 By MS/MS By MS/MS 1 1 3917800 1794300 2123500 937 1865 1008 2193;2194 1845;1846 1846 2635 2 FVFGTTPEDILR QGVLQNVRFVFGTTPE TTPEDILRNKGCSSST R F V L R N 0 1 0 1 0 0 1 1 0 1 1 0 0 2 1 0 2 0 0 1 0 0 12 0 1393.7242 CON__Q28194;P07996 CON__Q28194 217 228 THBS1 Thrombospondin-1 yes no 2 0.0019307 83.948 By MS/MS By matching 1 1 1130200 745750 384460 + 938 508 1009 2195;2196 1847 1847 1 FVSEGDGGR CPSRGRKRFVSEGDGG VSEGDGGRLKPESY__ R F V G R L 0 1 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 1 0 0 9 0 922.41446 Q53EL6 Q53EL6 455 463 PDCD4 Programmed cell death protein 4 yes yes 2 0.0010535 95.483 By MS/MS By MS/MS 1 1 17658000 8280700 9376800 939 1593 1010 2197;2198 1848;1849;1850;1851;1852;1853 1850 2210 6 FVSEIVDTVYEDGDSIQVGLVQYNSDPTDEFFLK DSFQEVLRFVSEIVDT PTDEFFLKDFSTKRQI R F V L K D 0 0 1 5 0 2 3 2 0 2 2 1 0 3 1 3 2 0 2 5 0 0 34 0 3867.8255 E7ENL6;P12111 E7ENL6 1054 1087 COL6A3 Collagen alpha-3(VI) chain yes no 3;4 1.1514E-10 72.728 By MS/MS By MS/MS 2 2 142730000 73384000 69345000 940 567 1011;1012 2199;2200;2201;2202 1854;1855;1856 1855 86;373 3 FYCDYCDTYLTHDSPSVR LFLSPLFRFYCDYCDT THDSPSVRKTHCSGRK R F Y V R K 0 1 0 3 2 0 0 0 1 0 1 0 0 1 1 2 2 0 3 1 0 0 18 0 2297.9358 A0A0A0MRR7;P09234 A0A0A0MRR7 25 42 SNRPC U1 small nuclear ribonucleoprotein C yes no 3 0.0043053 54.223 By MS/MS By matching 1 1 3092000 1410700 1681300 941 151 1013 2203;2204 1857 1857 207 1 FYEEVHDLER RCAHIEAKFYEEVHDL EEVHDLERKYAALYQP K F Y E R K 0 1 0 1 0 0 3 0 1 0 1 0 0 1 0 0 0 0 1 1 0 0 10 0 1335.6095 E9PNW0;F8VRJ2;E9PJJ2;E9PS34;E9PNJ7;A8MXH2;F8VVB5;E9PKT8;H0YH88;C9J6D1;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;C9JZI7;F8VV59;F8W543;B7Z9C2;F8W0J6;F5H4R6;H0YIV4;Q99733;P55209 E9PNW0 84 93 NAP1L4;NAP1L1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 yes no 2 0.0056157 62.823 By matching By MS/MS 1 1 725150 359880 365270 942 343 1014 2205;2206 1858 1858 4076 1 FYETKEESYSPSKDR KTEPIETKFYETKEES SYSPSKDRNIITEGNG K F Y D R N 0 1 0 1 0 0 3 0 0 0 0 2 0 1 1 3 1 0 2 0 0 0 15 2 1864.8479 Q96T23;H0YER1;H0YCN2 Q96T23 464 478 RSF1 Remodeling and spacing factor 1 yes no 3 0.018862 53.504 By MS/MS By matching 1 1 9628000 4823300 4804700 943 1933 1015 2207;2208 1859 1859 2734 1 FYGPQVNNISHTK NPEITTNRFYGPQVNN VNNISHTKEKKKGKAK R F Y T K E 0 0 2 0 0 1 0 1 1 1 0 1 0 1 1 1 1 0 1 1 0 0 13 0 1503.747 O00401 O00401 174 186 WASL Neural Wiskott-Aldrich syndrome protein yes yes 3 0.015323 41.577 By matching By MS/MS 1 1 899880 400130 499750 944 1085 1016 2209;2210 1860 1860 4225 1 FYTIRYREK PSHCPNDRFYTIRYRE YTIRYREKDKEKKWIF R F Y E K D 0 2 0 0 0 0 1 0 0 1 0 1 0 1 0 0 1 0 2 0 0 0 9 2 1274.6772 D3YTG3;Q7Z7G0;E9PPR9;H0YEA0;Q5JPC9 D3YTG3 162 170 ABI3BP;DKFZp667H216 Target of Nesh-SH3 no no 1 NaN 0 0 0 945 518 0 GAAEEAELEDSDDEEKPVKQDDFPK FISAGLKKGAAEEAEL VKQDDFPKDFGPRKLK K G A P K D 3 0 0 5 0 1 6 1 0 0 1 3 0 1 2 1 0 0 0 1 0 0 25 2 2790.2356 F6XM96;Q9UBB9 F6XM96 88 112 TFIP11 Tuftelin-interacting protein 11 yes no 3 0.00018383 70.315 By MS/MS By matching 1 1 16400000 8729400 7670200 946 728 1017 2211;2212 1861 1861 966 1 GAASTLVPGVSETSASPGSPSVR VRRRRQQRGAASTLVP SPGSPSVRSMSGPESS R G A V R S 3 1 0 0 0 0 1 3 0 0 1 0 0 0 3 6 2 0 0 3 0 0 23 0 2113.0651 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2513 2535 SRCAP Helicase SRCAP yes no 3 0.020647 40.137 By matching By MS/MS 1 1 4284500 1704400 2580100 947 156 1018 2213;2214 1862 1862 211 1 GADFLVTEVENGGSLGSK ISLQVKQKGADFLVTE NGGSLGSKKGVNLPGA K G A S K K 1 0 1 1 0 0 2 4 0 0 2 1 0 1 0 2 1 0 0 2 0 0 18 0 1778.8687 B4DNK4;P14618;H3BTN5;H3BQ34 B4DNK4 115 132 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 0.0074969 58.04 By matching By MS/MS 1 1 988550 567110 421430 948 376 1019 2215;2216 1863 1863 1 GADNDGSGSESGYTTPK ITNGYMGKGADNDGSG ESGYTTPKKRKARRNS K G A P K K 1 0 1 2 0 0 1 4 0 0 0 1 0 0 1 3 2 0 1 0 0 0 17 0 1641.6754 Q7Z417 Q7Z417 206 222 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.01583 81.606 By MS/MS By matching 1 1 3492000 1831300 1660700 949 1712 1020 2217;2218 1864 1864 2393 0 GADYMDCLYR RYWEEYSKGADYMDCL DYMDCLYRYLNTQFIK K G A Y R Y 1 1 0 2 1 0 0 1 0 0 1 0 1 0 0 0 0 0 2 0 0 0 10 0 1262.506 Q5T2B5;A0A0A0MTN0;Q13617 Q5T2B5 97 106 CUL2 Cullin-2 yes no 2 0.022443 40.268 By MS/MS 1 1927000 0 1927000 950 181 1021 2219 1865 1865 24 0 GAEETSWSGEER CSQAAGTKGAEETSWS TSWSGEERAAKVPSTP K G A E R A 1 1 0 0 0 0 4 2 0 0 0 0 0 0 0 2 1 1 0 0 0 0 12 0 1336.5531 Q9H7N4 Q9H7N4 958 969 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.0018384 79.466 By MS/MS By MS/MS 1 1 8573800 3830800 4743000 951 2017 1022 2220;2221 1866;1867;1868 1868 2885 3 GAEQLRGQTSDRLETVTLDVTK LAACLTEKGAEQLRGQ TVTLDVTKME______ K G A T K M 1 2 0 2 0 2 2 2 0 0 3 1 0 0 0 1 4 0 0 2 0 0 22 2 2416.2558 G3V3Y9;O75452;O14756 G3V3Y9 65 86 HSD17B6;RDH16 Retinol dehydrogenase 16;17-beta-hydroxysteroid dehydrogenase type 6 yes no 3 0.0047783 46.209 By matching By MS/MS 1 1 4220800 2563900 1656900 952 795 1023 2222;2223 1869 1869 389 3494;3495;3496 1 GAGDGSDEEVDGKADGAEAKPAE VPRRMARKGAGDGSDE GAEAKPAE________ K G A A E - 5 0 0 4 0 0 4 5 0 0 0 2 0 0 1 1 0 0 0 1 0 0 23 2 2173.9247 P35579 P35579 1938 1960 MYH9 Myosin-9 yes yes 3 0.0013758 62.823 By MS/MS 1 7586100 0 7586100 953 1340 1024 2224 1870 1870 1763 1 GAKEEHGGLIRSPR RRSKPLTRGAKEEHGG GGLIRSPRHEKKKKVR R G A P R H 1 2 0 0 0 0 2 3 1 1 1 1 0 0 1 1 0 0 0 0 0 0 14 2 1505.8063 P26368 P26368 68 81 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 3 0.015711 56.569 By matching By MS/MS 1 1 62486000 39097000 23389000 954 1315 1025 2225;2226 1871 1871 1732 1 GALHTVSHEDIR LRLDRLHKGALHTVSH TVSHEDIRDIRNSTGS K G A I R D 1 1 0 1 0 0 1 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1333.6739 Q13136;H0YD72;H0YDW2 Q13136 757 768 PPFIA1 Liprin-alpha-1 yes no 2 1.575E-08 117.95 By MS/MS By MS/MS 1 1 4589400 2667100 1922200 955 1492 1026 2227;2228 1872;1873 1873 2039 2 GAMAATYSALNR QDAPHLVKGAMAATYS ATYSALNRNQSPVLEP K G A N R N 4 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 1 0 0 0 12 0 1224.5921 P51812 P51812 701 712 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 2 0.0014684 83.948 By MS/MS By matching 1 1 1592500 750740 841770 956 1395 1027 2229;2230 1874 1874 1882 1 GANDGIRFVK CACLAKVKGANDGIRF NDGIRFVKSISELRTS K G A V K S 1 1 1 1 0 0 0 2 0 1 0 1 0 1 0 0 0 0 0 1 0 0 10 1 1075.5774 Q9BQS8 Q9BQS8 83 92 FYCO1 FYVE and coiled-coil domain-containing protein 1 yes yes 3 0.021346 51.445 By matching By MS/MS 1 1 985380 318280 667100 957 1953 1028 2231;2232 1875 1875 282 1 GANQLMRK HLVICMPKGANQLMRK GANQLMRKALLSLFMS K G A R K A 1 1 1 0 0 1 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 8 1 916.49127 H0YBC4 H0YBC4 103 110 LRRC6 yes yes 2 0.019033 48.504 By MS/MS 1 0 0 0 958 865 1029 2233 1876 1876 127 103 1 GAPSSPATGVLPSPQGK SLSRYFRRGAPSSPAT VLPSPQGKSTSLSKAS R G A G K S 2 0 0 0 0 1 0 3 0 0 1 1 0 0 4 3 1 0 0 1 0 0 17 0 1549.81 Q5SRE5 Q5SRE5 1705 1721 NUP188 Nucleoporin NUP188 homolog yes yes 2 0.0030673 76.761 By MS/MS By MS/MS 2 2 12431000 6842500 5588400 959 1617 1030;1031 2234;2235;2236;2237 1877;1878;1879;1880;1881 1877 2245;2246;2247 5 GAQASSGSPALPR SLAPGFIRGAQASSGS SGSPALPRKQRDKSPS R G A P R K 3 1 0 0 0 1 0 2 0 0 1 0 0 0 2 3 0 0 0 0 0 0 13 0 1197.6102 P42684 P42684 613 625 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.00058441 78.488 By MS/MS By MS/MS 1 1 15381000 7622200 7758400 960 1358 1032 2238;2239 1882;1883 1882 1779 2 GAQVRLSSGRASFGSR RSTAYPGRGAQVRLSS GRASFGSRSLYGLGSS R G A S R S 2 3 0 0 0 1 0 3 0 0 1 0 0 1 0 4 0 0 0 1 0 0 16 2 1634.8601 CON__Q9DCV7 CON__Q9DCV7 16 31 yes yes 3 0.0047123 54.672 By MS/MS By matching 1 1 5142100 2131500 3010500 + 961 512 1033 2240;2241 1884 1884 700;701;702 1 GASQAGMTGYGMPR GLQMGTNRGASQAGMT MTGYGMPRQIL_____ R G A P R Q 2 1 0 0 0 1 0 4 0 0 0 0 2 0 1 1 1 0 1 0 0 0 14 0 1382.6071 P37802;C9J5W6;Q9UI15 P37802 183 196 TAGLN2;TAGLN3 Transgelin-2;Transgelin-3 yes no 2 0.0075471 51.998 By MS/MS By MS/MS 2 2 3588100 1636200 1951900 962 1344 1034;1035 2242;2243;2244;2245 1885;1886 1885 176 4286 2 GASTFKEEPQTVPEARSR PAQLGLGRGASTFKEE TVPEARSRDATPPVSP R G A S R D 2 2 0 0 0 1 3 1 0 0 0 1 0 1 2 2 2 0 0 1 0 0 18 2 1988.9916 P17275 P17275 235 252 JUNB Transcription factor jun-B yes yes 3 0.0094252 53.403 By MS/MS 1 631380 631380 0 963 1282 1036 2246 1887 1887 406 1681;3661 1 GAVAAEGASDTEREEPTESQGLAAR SSAMSKLRGAVAAEGA ESQGLAARLRRPSPPE R G A A R L 6 2 0 1 0 1 5 3 0 0 1 0 0 0 1 2 2 0 0 1 0 0 25 1 2501.163 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 907 931 PHRF1 PHD and RING finger domain-containing protein 1 yes no 3 0.0053427 49.125 By MS/MS By MS/MS 1 1 26412000 11847000 14565000 964 252 1037 2247;2248 1888;1889 1888 365 2 GAVGLNLQSK DITFLWYKGAVGLNLQ VGLNLQSKTQRSLTAE K G A S K T 1 0 1 0 0 1 0 2 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 985.55564 Q96LA6 Q96LA6 150 159 FCRL1 Fc receptor-like protein 1 yes yes 2 0.013461 69.672 By MS/MS 1 90996000 90996000 0 965 1906 1038 2249 1890 1890 2702 1 GDADMYDLPK FSDLNSTRGDADMYDL ADMYDLPKKEDALLYQ R G D P K K 1 0 0 3 0 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 0 0 10 0 1123.4856 P50402;Q5HY57 P50402 69 78 EMD Emerin yes no 2 0.02108 54.539 By MS/MS By matching 1 1 4831400 1873700 2957800 966 1389 1039 2250;2251 1891 1891 4316 0 GDADMYDLPKKEDALLYQSK FSDLNSTRGDADMYDL DALLYQSKGYNDDYYE R G D S K G 2 0 0 4 0 1 1 1 0 0 3 3 1 0 1 1 0 0 2 0 0 0 20 2 2299.1042 P50402;Q5HY57 P50402 69 88 EMD Emerin yes no 3 0.0069361 45.138 By matching By MS/MS 1 1 2641700 1195000 1446600 967 1389 1040 2252;2253 1892 1892 183 4316 1 GDFCIQVGR DSKPGTIRGDFCIQVG DFCIQVGRNIIHGSDS R G D G R N 0 1 0 1 1 1 0 2 0 1 0 0 0 1 0 0 0 0 0 1 0 0 9 0 1050.4917 P15531;E7ERL0;J3KPD9;Q32Q12;O60361;P22392 P15531 106 114 NME1;NME2;NME1-NME2;NME2P1 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 2 0.018731 67.169 By MS/MS By matching 1 1 1157500 526280 631220 968 1275 1041 2254;2255 1893 1893 1 GDLGIEIPAEK SDGIMVARGDLGIEIP GIEIPAEKVFLAQKMM R G D E K V 1 0 0 1 0 0 2 2 0 2 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1140.6027 B4DNK4;P14618;H3BTN5;H3BR70;P30613 B4DNK4 221 231 PKM;PKLR Pyruvate kinase;Pyruvate kinase PKM;Pyruvate kinase PKLR yes no 2 0.017346 59.908 By MS/MS By matching 1 1 918460 372030 546430 969 376 1042 2256;2257 1894 1894 1 GDVTAEEAAGASPAK SQSSKAPRGDVTAEEA AAGASPAKANGQENGH R G D A K A 5 0 0 1 0 0 2 2 0 0 0 1 0 0 1 1 1 0 0 1 0 0 15 0 1372.647 P49006 P49006 11 25 MARCKSL1 MARCKS-related protein yes yes 2 6.2197E-147 196.45 By MS/MS By MS/MS 1 1 33236000 15234000 18002000 970 1377 1043 2258;2259 1895;1896;1897 1896 1837 3 GDVTAEEAAGASPAKANGQENGHVK SQSSKAPRGDVTAEEA GQENGHVKSNGDLSPK R G D V K S 6 0 2 1 0 1 3 4 1 0 0 2 0 0 1 1 1 0 0 2 0 0 25 1 2407.1364 P49006 P49006 11 35 MARCKSL1 MARCKS-related protein yes yes 3;4 3.1102E-54 127.1 By MS/MS By MS/MS 5 7 108130000 54176000 53957000 971 1377 1044;1045 2260;2261;2262;2263;2264;2265;2266;2267;2268;2269;2270;2271 1898;1899;1900;1901;1902;1903;1904;1905;1906;1907;1908 1902 196;197;413 1837 11 GEAAAERPGEAAVASSPSK QFSKTAAKGEAAAERP AVASSPSKANGQENGH K G E S K A 6 1 0 0 0 0 3 2 0 0 0 1 0 0 2 3 0 0 0 1 0 0 19 1 1783.8701 P29966 P29966 12 30 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.002981 62.94 By MS/MS By MS/MS 1 1 6153500 2693800 3459700 972 1325 1046 2272;2273 1909;1910 1909 1745;1746;1747 2 GEAAAERPGEAAVASSPSKANGQENGHVK QFSKTAAKGEAAAERP GQENGHVKVNGDASPA K G E V K V 7 1 2 0 0 1 4 4 1 0 0 2 0 0 2 3 0 0 0 2 0 0 29 2 2818.3594 P29966 P29966 12 40 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 4 0.0027236 42.708 By MS/MS 1 2238600 0 2238600 973 1325 1047 2274 1911 1911 188;407 1745;1746;1747 1 GEATVSFDDPPSAK DKDTGKPKGEATVSFD FDDPPSAKAAIDWFDG K G E A K A 2 0 0 2 0 0 1 1 0 0 0 1 0 1 2 2 1 0 0 1 0 0 14 0 1419.6518 A0A075B7D9;H3BPE7;P35637;Q92804 A0A075B7D9 193 206 TAF15;FUS RNA-binding protein FUS;TATA-binding protein-associated factor 2N yes no 2 0.00020522 82.925 By matching By MS/MS 1 1 1379400 534530 844910 974 16 1048 2275;2276 1912 1912 16 1 GECQAEGVLFFQGDREWFWDLATGTMK DAAVECHRGECQAEGV DLATGTMKERSWPAVG R G E M K E 2 1 0 2 1 2 3 4 0 0 2 1 1 3 0 0 2 2 0 1 0 0 27 1 3177.4324 P02790;Q9BS19 P02790 152 178 HPX Hemopexin yes no 3 0.0089756 52.019 By MS/MS By matching 1 1 28406000 13292000 15113000 975 1214 1049 2277;2278 1913 1913 145 1 GEEGSDDDETENGPKPK KKRRRHPKGEEGSDDD TENGPKPKKRRPPKAE K G E P K K 0 0 1 3 0 0 4 3 0 0 0 2 0 0 2 1 1 0 0 0 0 0 17 1 1802.7442 Q6PD62 Q6PD62 966 982 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 2;3 0.010409 54.859 By MS/MS By MS/MS 3 2 6771800 4314900 2456900 976 1683 1050 2279;2280;2281;2282;2283 1914;1915 1914 2353 0 GEFSASPMLK RSPIRQDRGEFSASPM FSASPMLKSGMSPEQS R G E L K S 1 0 0 0 0 0 1 1 0 0 1 1 1 1 1 2 0 0 0 0 0 0 10 0 1065.5165 Q9UQ35 Q9UQ35 1119 1128 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0048441 94.767 By MS/MS By MS/MS 2 2 12873000 5933300 6939600 977 2134 1051;1052 2284;2285;2286;2287 1916;1917;1918;1919 1916 307 3071 4 GEGPGEAGGPLTPR EGEDKKVRGEGPGEAG AGGPLTPRRVSSDLQH R G E P R R 1 1 0 0 0 0 2 5 0 0 1 0 0 0 3 0 1 0 0 0 0 0 14 0 1293.6313 P50548 P50548 515 528 ERF ETS domain-containing transcription factor ERF yes yes 2 0.012732 66.022 By matching By MS/MS 1 1 4522400 1943400 2579000 978 1390 1053 2288;2289 1920 1920 3708 1 GELQYRPSRR LKKWRETRGELQYRPS LQYRPSRRLHGSRAIH R G E R R L 0 3 0 0 0 1 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 10 2 1260.6687 Q4KMP7 Q4KMP7 626 635 TBC1D10B TBC1 domain family member 10B yes yes 2 0.018851 49.423 By MS/MS By matching 1 1 3348900 1375600 1973300 979 1589 1054 2290;2291 1921 1921 2197;4366 1 GEPAAAAAPEAGASPVEK ASPSAAEKGEPAAAAA AGASPVEKEAPAEGEA K G E E K E 7 0 0 0 0 0 3 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 18 0 1621.7948 P29966 P29966 88 105 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 1.107E-05 95.409 By MS/MS By MS/MS 1 1 7800600 3474100 4326500 980 1325 1055 2292;2293 1922;1923 1922 1748 2 GEPNVSYICSR GSAKQLVRGEPNVSYI NVSYICSRYYRAPELI R G E S R Y 0 1 1 0 1 0 1 1 0 1 0 0 0 0 1 2 0 0 1 1 0 0 11 0 1280.5819 P49841;A8MT37;P49840 P49841 210 220 GSK3B;GSK3A Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha yes no 2 1.5109E-15 140.17 By MS/MS By MS/MS 1 1 28418000 13325000 15092000 981 1385 1056 2294;2295 1924;1925;1926;1927;1928;1929;1930 1925 1865;4312 7 GEVPPKETPK PSQGAEAKGEVPPKET VPPKETPKKKKKFSFK K G E P K K 0 0 0 0 0 0 2 1 0 0 0 2 0 0 3 0 1 0 0 1 0 0 10 1 1080.5815 P49006 P49006 78 87 MARCKSL1 MARCKS-related protein yes yes 2;3 0.00031128 105.25 By MS/MS By MS/MS 10 12 33368000 14672000 18696000 982 1377 1057 2296;2297;2298;2299;2300;2301;2302;2303;2304;2305;2306;2307;2308;2309;2310;2311;2312;2313;2314;2315;2316;2317 1931;1932;1933;1934;1935;1936;1937;1938;1939;1940;1941;1942;1943;1944;1945;1946;1947;1948;1949 1949 3702 19 GEVPPKETPKK PSQGAEAKGEVPPKET PPKETPKKKKKFSFKK K G E K K K 0 0 0 0 0 0 2 1 0 0 0 3 0 0 3 0 1 0 0 1 0 0 11 2 1208.6765 P49006 P49006 78 88 MARCKSL1 MARCKS-related protein yes yes 2;3 1.5864E-10 139.74 By MS/MS By MS/MS 2 3 34678000 4717800 29960000 983 1377 1058 2318;2319;2320;2321;2322 1950;1951;1952;1953 1952 3702 3 GFGDGYNGYGGGPGGGNFGGSPGYGGGR SDGYGSGRGFGDGYNG SPGYGGGRGGYGGGGP R G F G R G 0 1 2 1 0 0 0 16 0 0 0 0 0 2 2 1 0 0 3 0 0 0 28 0 2494.0323 P22626 P22626 239 266 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 3 0.00037926 57.811 By MS/MS By MS/MS 1 1 14935000 6472200 8463000 984 1305 1059 2323;2324 1954;1955 1955 186 1716 2 GFGEYSRSPTF DEEIEKMKGFGEYSRS EYSRSPTF________ K G F T F - 0 1 0 0 0 0 1 2 0 0 0 0 0 2 1 2 1 0 1 0 0 0 11 1 1246.5619 D6REL5;Q6UWZ7 D6REL5 350 360 FAM175A BRCA1-A complex subunit Abraxas yes no 2 0.0044542 89.266 By MS/MS By matching 1 1 3746400 1821800 1924600 985 532 1060 2325;2326 1956 1956 715 1 GFGFVDFNSEEDAK DRETGSSKGFGFVDFN FNSEEDAKAAKEAMED K G F A K A 1 0 1 2 0 0 2 2 0 0 0 1 0 3 0 1 0 0 0 1 0 0 14 0 1560.6733 P19338;H7BY16 P19338 611 624 NCL Nucleolin yes no 2 0.00040931 78.548 By MS/MS By MS/MS 1 1 1538200 801170 737000 986 1294 1061 2327;2328 1957;1958 1957 2 GFGFVTFDDHDPVDK DRQSGKKRGFGFVTFD DDHDPVDKIVLQKYHT R G F D K I 0 0 0 4 0 0 0 2 1 0 0 1 0 3 1 0 1 0 0 2 0 0 15 0 1694.7577 P22626;A0A087WUI2 P22626 154 168 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3 0.012887 58.32 By MS/MS By matching 1 1 894450 574740 319720 987 1305 1062 2329;2330 1959 1959 1 GFLLLASLR VDAVRAEKGFLLLASL FLLLASLRQMKKTRGT K G F L R Q 1 1 0 0 0 0 0 1 0 0 4 0 0 1 0 1 0 0 0 0 0 0 9 0 988.60695 CON__Q28194;P07996 CON__Q28194 87 95 THBS1 Thrombospondin-1 yes no 2 0.0023051 101.33 By MS/MS By MS/MS 1 1 3484900 1750400 1734500 + 988 508 1063 2331;2332 1960;1961 1960 2 GFLNSHRYPR G F P R 0 2 1 0 0 0 0 1 1 0 1 0 0 1 1 1 0 0 1 0 0 0 10 1 1245.6367 REV__Q9NYQ7 yes yes 2 0.0055369 94.309 By matching By MS/MS 1 2 31574000 8970700 22604000 + 989 2215 1064 2333;2334;2335 1962 1962 3201 1 GFSDSGGGPPAK RGSLLLRRGFSDSGGG SGGGPPAKQRDLEGAV R G F A K Q 1 0 0 1 0 0 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 12 0 1075.4934 Q9H307;G3V5F0;G3V579 Q9H307 64 75 PNN Pinin yes no 2 0.0012967 92.792 By MS/MS By MS/MS 1 1 10475000 5052500 5422600 990 2001 1065 2336;2337 1963;1964;1965;1966 1965 2862 4 GFSLKSHLNRHQNIHSGEK YVCGVCGRGFSLKSHL QNIHSGEKPIVCKDCG R G F E K P 0 1 2 0 0 1 1 2 3 1 2 2 0 1 0 3 0 0 0 0 0 0 19 2 2188.125 A0A0A0MTK6;A0A0A0MTH2;P52736 A0A0A0MTK6 427 445 ZNF133 Zinc finger protein 133 yes no 3 0.021005 44.632 By MS/MS 1 0 0 0 991 179 1066 2338 1967 1967 253;254 1 GFSYLYGAWGR SVVQLNWRGFSYLYGA YLYGAWGRDYSPQHPN R G F G R D 1 1 0 0 0 0 0 3 0 0 1 0 0 1 0 1 0 1 2 0 0 0 11 0 1275.6037 Q6UX06 Q6UX06 266 276 OLFM4 Olfactomedin-4 yes yes 2 0.0001773 110.87 By MS/MS By MS/MS 1 1 3731900 2231700 1500300 992 1692 1067 2339;2340 1968;1969 1968 2 GFYESLAK STFTMEKRGFYESLAK GFYESLAKVKPGNFKV R G F A K V 1 0 0 0 0 0 1 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 8 0 913.45453 Q9HB21 Q9HB21 343 350 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 2 0.0069235 97.602 By MS/MS By MS/MS 1 1 2056200 1163900 892300 993 2023 1068 2341;2342 1970;1971 1971 2893 2 GGAAGGALPTSPGPALGAK ________________ PGPALGAKGALKAGVG R G G A K G 5 0 0 0 0 0 0 6 0 0 2 1 0 0 3 1 1 0 0 0 0 0 19 0 1548.826 Q9UPR0 Q9UPR0 7 25 PLCL2 Inactive phospholipase C-like protein 2 yes yes 2 9.621E-10 102.29 By MS/MS By MS/MS 1 1 4694700 2311300 2383400 994 2130 1069 2343;2344 1972;1973 1972 3057 2 GGAPDPSPGATATPGAPAQPSSPDAR RGRKPRVRGGAPDPSP QPSSPDARRNGQEKHF R G G A R R 6 1 0 2 0 1 0 4 0 0 0 0 0 0 7 3 2 0 0 0 0 0 26 0 2329.0935 O95365 O95365 505 530 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 3 0.013511 41.423 By matching By MS/MS 1 1 5345100 2463800 2881200 995 1190 1070 2345;2346 1974 1974 1587;1588 1 GGDSIGETPTPGASKR AETPRTDRGGDSIGET PTPGASKRKSRWDETP R G G K R K 1 1 0 1 0 0 1 4 0 1 0 1 0 0 2 2 2 0 0 0 0 0 16 1 1528.7481 O75533 O75533 319 334 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.015094 46.592 By matching By MS/MS 1 1 2290700 952110 1338500 996 1166 1071 2347;2348 1975 1975 3623;3624 0 GGETPGSEQWK LLTPDAQKGGETPGSE TPGSEQWKFQELSQPR K G G W K F 0 0 0 0 0 1 2 3 0 0 0 1 0 0 1 1 1 1 0 0 0 0 11 0 1174.5255 A0A087X2D8;O60271;D6RHI8 A0A087X2D8 223 233 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2 0.010744 78.342 By MS/MS By MS/MS 1 1 3176500 1560500 1616100 997 115 1072 2349;2350 1976;1977 1977 3246 2 GGGDVLEPVSSDSLSTK NKEAVEVKGGGDVLEP SSDSLSTKDFAAVEEV K G G T K D 0 0 0 2 0 0 1 3 0 0 2 1 0 0 1 4 1 0 0 2 0 0 17 0 1646.7999 Q5JSH3;H7BY83 Q5JSH3 185 201 WDR44 WD repeat-containing protein 44 yes no 2 0.014197 50.827 By MS/MS By matching 1 1 1255400 789560 465800 998 1606 1073 2351;2352 1978 1978 2226 1 GGGGGQDNGLEGLGNDSR ERGRDEARGGGGGQDN EGLGNDSRDMYMESEG R G G S R D 0 1 2 2 0 1 1 8 0 0 2 0 0 0 0 1 0 0 0 0 0 0 18 0 1658.7245 P08621 P08621 394 411 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes yes 2 0.014956 52.101 By matching By MS/MS 1 1 1676200 775700 900530 999 1241 1074 2353;2354 1979 1979 1 GGGTPDANSLAPPGK FPPNSSGRGGGTPDAN NSLAPPGKAGGGSGPQ R G G G K A 2 0 1 1 0 0 0 4 0 0 1 1 0 0 3 1 1 0 0 0 0 0 15 0 1337.6575 Q5T171;Q9BRQ0 Q5T171 262 276 PYGO2 Pygopus homolog 2 yes no 2 0.0054315 69.878 By MS/MS By matching 1 1 10812000 5111000 5701400 1000 1623 1075 2355;2356 1980 1980 3794 1 GGIDNPAITSDQELDDKK LSPVETWKGGIDNPAI DQELDDKKMKKKTHKV K G G K K M 1 0 1 4 0 1 1 2 0 2 1 2 0 0 1 1 1 0 0 0 0 0 18 1 1914.9171 A0A0A0MSK6;Q13017;H0YK04 A0A0A0MSK6 1208 1225 ARHGAP5 Rho GTPase-activating protein 5 yes no 3 0.0086518 45.885 By matching By MS/MS 1 1 6639200 2719400 3919800 1001 165 1076 2357;2358 1981 1981 229 1 GGLLTSEEDSGFSTSPK KLNRCAIKGGLLTSEE SGFSTSPKDNSLPKKK K G G P K D 0 0 0 1 0 0 2 3 0 0 2 1 0 1 1 4 2 0 0 0 0 0 17 0 1710.7948 Q9UQR1 Q9UQR1 292 308 ZNF148 Zinc finger protein 148 yes yes 2 0.0022288 70.281 By MS/MS By MS/MS 1 1 2137700 829150 1308500 1002 2137 1077 2359;2360 1982;1983 1983 3100 2 GGLSPANDTGAK EEDNSYNRGGLSPAND PANDTGAKKKKKKQKK R G G A K K 2 0 1 1 0 0 0 3 0 0 1 1 0 0 1 1 1 0 0 0 0 0 12 0 1086.5306 K7EN42;B7Z8J4;P30419 K7EN42 43 54 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes no 2 0.0010212 96.135 By MS/MS By MS/MS 1 1 16013000 7754100 8259100 1003 410 1078 2361;2362 1984;1985 1984 574 2 GGNLPPVSPNDSGAK IIIKASAKGGNLPPVS SPNDSGAKIASNPLER K G G A K I 1 0 2 1 0 0 0 3 0 0 1 1 0 0 3 2 0 0 0 1 0 0 15 0 1408.6947 A0A087X0F1;Q9UK61 A0A087X0F1 461 475 FAM208A Protein FAM208A yes no 2 0.0002419 78.508 By MS/MS By MS/MS 2 1 4717100 3487600 1229500 1004 96 1079 2363;2364;2365 1986;1987 1986 122 2 GGNRPNTGPLYTEADR NVSLADLRGGNRPNTG PLYTEADRVIQRTNSM R G G D R V 1 2 2 1 0 0 1 3 0 0 1 0 0 0 2 0 2 0 1 0 0 0 16 1 1716.818 A0JP02;B4DJX4;Q9HAU0 A0JP02 146 161 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes no 3 0.015318 48.405 By MS/MS By matching 1 1 2426600 1095100 1331400 1005 308 1080 2366;2367 1988 1988 4061 1 GGPASPGGLQGLETR SWAMNMYRGGPASPGG GLQGLETRRLSLPSSK R G G T R R 1 1 0 0 0 1 1 5 0 0 2 0 0 0 2 1 1 0 0 0 0 0 15 0 1395.7106 C9JWC4;Q8NCD3 C9JWC4 384 398 HJURP Holliday junction recognition protein yes no 2 1.4285E-07 105.39 By MS/MS By matching 1 1 4942100 4806100 135990 1006 486 1081 2368;2369 1989 1989 673 1 GGPASVPSSSPGTSVK GSPRTQGRGGPASVPS SSPGTSVKKPDPNIKN R G G V K K 1 0 0 0 0 0 0 3 0 0 0 1 0 0 3 5 1 0 0 2 0 0 16 0 1413.71 O43237;J3KRZ2;J3KRI4 O43237 398 413 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 2 0.00074149 87.363 By MS/MS By MS/MS 1 1 2996300 1450900 1545400 1007 1116 1082 2370;2371 1990;1991 1991 1486;1487;1488 2 GGPGKLSPR DFALPSSRGGPGKLSP GPGKLSPRKGVSQTGT R G G P R K 0 1 0 0 0 0 0 3 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 867.49265 Q12888 Q12888 1356 1364 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 2 0.0066679 107.34 By MS/MS By MS/MS 1 1 14581000 7401400 7179900 1008 1481 1083 2372;2373 1992;1993 1992 2003 2 GGSDDSSKDPIDVNYEK EVAYSLLRGGSDDSSK PIDVNYEKLKTDIKVV R G G E K L 0 0 1 4 0 0 1 2 0 1 0 2 0 0 1 3 0 0 1 1 0 0 17 1 1824.8014 P09874 P09874 780 796 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 1.2711E-08 101.04 By MS/MS By MS/MS 1 1 5185500 2498200 2687200 1009 1244 1084 2374;2375 1994;1995 1995 1644 2 GGSGSGPTIEEVD GFGAQGPKGGSGSGPT GPTIEEVD________ K G G V D - 0 0 0 1 0 0 2 4 0 1 0 0 0 0 1 2 1 0 0 1 0 0 13 0 1203.5255 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 630 642 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.00060463 89.403 By MS/MS By MS/MS 2 2 12604000 5745500 6858500 1010 242 1085 2376;2377;2378;2379 1996;1997;1998 1997 348;3302 3 GGSGSHNWGTVKDELTESPK GLKHEDKRGGSGSHNW DELTESPKYIQKQISY R G G P K Y 0 0 1 1 0 0 2 4 1 0 1 2 0 0 1 3 2 1 0 1 0 0 20 1 2084.9763 Q8NC51 Q8NC51 217 236 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3 0.0043524 55.171 By MS/MS By matching 1 1 89955000 48356000 41598000 1011 1791 1086 2380;2381 1999 1999 2511 1 GGSISVQVNSIKFDSE KKKRGSYRGGSISVQV NSIKFDSE________ R G G S E - 0 0 1 1 0 1 1 2 0 2 0 1 0 1 0 4 0 0 0 2 0 0 16 1 1665.821 A0A0A0MRM9;Q14978 A0A0A0MRM9 693 708 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 2.9762E-207 207.05 By MS/MS By MS/MS 1 1 24813000 13855000 10958000 1012 146 1087 2382;2383 2000;2001;2002;2003;2004;2005;2006 2000 195 7 GGSPDLWK PESQKSSRGGSPDLWK GGSPDLWKSSFFIEPQ R G G W K S 0 0 0 1 0 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 0 0 8 0 858.42357 Q96JM3 Q96JM3 474 481 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.013352 81.95 By matching By MS/MS 1 1 16372000 7490400 8881900 1013 1903 1088 2384;2385 2007 2007 2689 1 GGVTGSPEASISGSK NFSKPKGKGGVTGSPE EASISGSKGDLKSSKA K G G S K G 1 0 0 0 0 0 1 4 0 1 0 1 0 0 1 4 1 0 0 1 0 0 15 0 1332.6521 Q09666 Q09666 5726 5740 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.004476 61.265 By matching By MS/MS 1 1 6542500 3325600 3216900 1014 1474 1089 2386;2387 2008 2008 1993 1 GHPHSASSPSER NNSSSETRGHPHSASS SASSPSERVFPMPLPR R G H E R V 1 1 0 0 0 0 1 1 2 0 0 0 0 0 2 4 0 0 0 0 0 0 12 0 1247.5643 C9JZP1;C9J470;E9PHA2;Q15003 C9JZP1 21 32 NCAPH Condensin complex subunit 2 yes no 2 0.00028011 101.35 By MS/MS By MS/MS 1 1 4148800 2024900 2123800 1015 440 1090 2388;2389 2009;2010 2010 632 2 GHTASESDEQQWPEEK GSQRSRKRGHTASESD EQQWPEEKRLKEDILE R G H E K R 1 0 0 1 0 2 4 1 1 0 0 1 0 0 1 2 1 1 0 0 0 0 16 0 1856.7813 Q9NTI5;A9IYQ1 Q9NTI5 1253 1268 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2;3 5.8984E-06 97.776 By MS/MS By MS/MS 2 2 29199000 15047000 14151000 1016 2054 1091 2390;2391;2392;2393 2011;2012;2013;2014 2012 2933;2934;3940 4 GHTASESDEQQWPEEKR GSQRSRKRGHTASESD QQWPEEKRLKEDILEN R G H K R L 1 1 0 1 0 2 4 1 1 0 0 1 0 0 1 2 1 1 0 0 0 0 17 1 2012.8824 Q9NTI5;A9IYQ1 Q9NTI5 1253 1269 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 0.00054675 77.726 By MS/MS By MS/MS 1 1 15642000 8470000 7172400 1017 2054 1092 2394;2395 2015;2016 2016 2933;2934;3940 2 GHYYVPLLR ERIREYLKGHYYVPLL HYYVPLLRAEETSSPV K G H L R A 0 1 0 0 0 0 0 1 1 0 2 0 0 0 1 0 0 0 2 1 0 0 9 0 1116.608 Q86XL3 Q86XL3 474 482 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.015409 53.554 By MS/MS 1 0 0 0 1018 1740 1093 2396 2017 2017 4389 1 GIGLDESELDSEAELMR TAESHDSKGIGLDESE DSEAELMRSMGLPLQF K G I M R S 1 1 0 2 0 0 4 2 0 1 3 0 1 0 0 2 0 0 0 0 0 0 17 0 1862.8568 Q96RS0 Q96RS0 79 95 TGS1 Trimethylguanosine synthase yes yes 2 0.01173 57.973 By MS/MS 1 1153500 1153500 0 1019 1926 1094 2397 2018 2018 277 2719 1 GIITDSFGR TIGVKDGRGIITDSFG IITDSFGRHRRALSTT R G I G R H 0 1 0 1 0 0 0 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 9 0 964.49779 C9JUH3;A0A0A0MT72;Q9BSQ5 C9JUH3 282 290 CCM2 Cerebral cavernous malformations 2 protein yes no 2 0.00997 73.841 By matching By MS/MS 1 1 2193500 1092900 1100600 1020 175 1095 2398;2399 2019 2019 247 1 GILAADESTGSIAK HRIVAPGKGILAADES ESTGSIAKRLQSIGTE K G I A K R 3 0 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 14 0 1331.6933 H3BQN4;J3KPS3;P04075;H3BUH7;H3BPS8 H3BQN4 29 42 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.00032394 86.497 By MS/MS By MS/MS 1 1 1806600 740110 1066500 1021 921 1096 2400;2401 2020;2021 2021 1232 2 GILAADESTGSIAKR HRIVAPGKGILAADES STGSIAKRLQSIGTEN K G I K R L 3 1 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 15 1 1487.7944 H3BQN4;J3KPS3;P04075;H3BUH7;H3BPS8 H3BQN4 29 43 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.009529 60.918 By matching By MS/MS 1 1 3781200 1992300 1788900 1022 921 1097 2402;2403 2022 2022 1232 1 GILHTDSQSQSLR TVMRQMKRGILHTDSQ DSQSQSLRNLNIINTH R G I L R N 0 1 0 1 0 2 0 1 1 1 2 0 0 0 0 3 1 0 0 0 0 0 13 0 1440.7321 Q15678 Q15678 455 467 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 0.01194 58.098 By matching By MS/MS 1 1 2884500 1444700 1439800 1023 1564 1098 2404;2405 2023 2023 2157;2158 1 GILVASDSGAVELWELDENETLIVSK DLTWVGERGILVASDS NETLIVSKFCKYEHDD R G I S K F 2 0 1 2 0 0 4 2 0 2 4 1 0 0 0 3 1 1 0 3 0 0 26 0 2786.4226 Q9BQA1;H0Y711 Q9BQA1 93 118 WDR77 Methylosome protein 50 yes no 3 4.5577E-06 63.559 By MS/MS By matching 1 1 8025000 6311300 1713600 1024 1951 1099 2406;2407 2024 2024 1 GISPIVFDR KKERKRARGISPIVFD ISPIVFDRSGSSASES R G I D R S 0 1 0 1 0 0 0 1 0 2 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1002.5498 J3QR07;Q96MU7 J3QR07 306 314 YTHDC1 YTH domain-containing protein 1 yes no 2 0.010855 72.2 By MS/MS By MS/MS 1 1 3478500 1977000 1501500 1025 1026 1100 2408;2409 2025;2026 2025 1365 2 GISPVVSEHR SFSKAENKGISPVVSE SPVVSEHRKQIDDLKK K G I H R K 0 1 0 0 0 0 1 1 1 1 0 0 0 0 1 2 0 0 0 2 0 0 10 0 1079.5724 F8W0B5;H0YH87;F8WB06;F8VQP2;V9GY86;Q99700 F8W0B5 160 169 ATXN2 Ataxin-2 yes no 2 0.010835 63.944 By MS/MS By matching 1 1 2374700 855850 1518900 1026 734 1101 2410;2411 2027 2027 979 1 GISQTNLITTVTPEKK TGQYATTKGISQTNLI TTVTPEKKAEEERDEE K G I K K A 0 0 1 0 0 1 1 1 0 2 1 2 0 0 1 1 4 0 0 1 0 0 16 1 1728.9622 A0A0J9YW26;A0A1B0GTF8;A8K968;A0A0A0MRA8;A0A0A0MSA4;Q9Y2J2 A0A0J9YW26 40 55 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 2;3 0.010122 62.861 By MS/MS By MS/MS 2 2 5901200 3053200 2848100 1027 134 1102 2412;2413;2414;2415 2028;2029 2028 3253;3254 2 GITALQADIK FKIAGTNKGITALQAD TALQADIKLPGIPIKI K G I I K L 2 0 0 1 0 1 0 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 10 0 1028.5866 Q8TCS8 Q8TCS8 553 562 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 2 0.014662 67.494 By matching By MS/MS 1 1 1896100 1116000 780100 1028 1820 1103 2416;2417 2030 2030 1 GKASPFEEDQNR GPEKGDQKGKASPFEE PFEEDQNRDLKQGDDD K G K N R D 1 1 1 1 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 12 1 1376.6321 Q8TB72;C9JW01;A0A0C4DG68;A0A0A0MR59 Q8TB72 133 144 PUM2 Pumilio homolog 2 yes no 2 0.0010385 100.18 By MS/MS By MS/MS 1 1 6780900 2798400 3982500 1029 1814 1104 2418;2419 2031;2032 2032 2556 2 GKDSLSDDGVDLK ________________ SDDGVDLKTQPVRNTE K G K L K T 0 0 0 4 0 0 0 2 0 0 2 2 0 0 0 2 0 0 0 1 0 0 13 1 1347.6518 P07948;E5RJ37 P07948 8 20 LYN Tyrosine-protein kinase Lyn yes no 2 4.9202E-79 175.27 By MS/MS By MS/MS 1 1 11249000 4547200 6702300 1030 1235 1105 2420;2421 2033;2034 2034 1630 2 GKELSDQATASPIVAR EDDSLDSKGKELSDQA TASPIVARTDLSNIPG K G K A R T 3 1 0 1 0 1 1 1 0 1 1 1 0 0 1 2 1 0 0 1 0 0 16 1 1641.8686 Q5JSH3 Q5JSH3 86 101 WDR44 WD repeat-containing protein 44 yes yes 3 0.00025076 90.581 By matching By MS/MS 1 1 3378900 1688100 1690800 1031 1606 1106 2422;2423 2035 2035 2225 1 GKGSPRPQAPK EEEEEKLKGKGSPRPQ SPRPQAPKANGTSALT K G K P K A 1 1 0 0 0 1 0 2 0 0 0 2 0 0 3 1 0 0 0 0 0 0 11 2 1121.6305 A0A0A0MRM9;Q14978 A0A0A0MRM9 544 554 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 0.0061514 75.483 By MS/MS By MS/MS 1 1 70749000 32565000 38184000 1032 146 1107 2424;2425 2036;2037 2037 196 2 GKIEVLDSPASK LPNSEGGKGKIEVLDS VLDSPASKKKK_____ K G K S K K 1 0 0 1 0 0 1 1 0 1 1 2 0 0 1 2 0 0 0 1 0 0 12 1 1242.682 Q8N5I9 Q8N5I9 171 182 C12orf45 Uncharacterized protein C12orf45 yes yes 2 0.011906 74.133 By MS/MS By MS/MS 1 1 2858100 1273800 1584300 1033 1780 1108 2426;2427 2038;2039 2038 2503 1 GKLEAIITPPPAK LAKKRGSKGKLEAIIT IITPPPAKKAKSPSQK K G K A K K 2 0 0 0 0 0 1 1 0 2 1 2 0 0 3 0 1 0 0 0 0 0 13 1 1333.7969 D6RCF2;O75367 D6RCF2 122 134 H2AFY Histone H2A;Core histone macro-H2A.1 yes no 2 1.0536E-05 107.69 By MS/MS By MS/MS 1 1 2825900 1288600 1537400 1034 531 1109 2428;2429 2040;2041 2041 3394 2 GKLPESPK PGGEREERGKLPESPK GKLPESPKRAEEIWQQ R G K P K R 0 0 0 0 0 0 1 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 8 1 854.48617 E9PLT2;E9PKP7;P17480 E9PLT2 66 73 UBTF Nucleolar transcription factor 1 yes no 2 0.019233 102.95 By MS/MS By MS/MS 1 1 5381100 2341600 3039500 1035 658 1110 2430;2431 2042;2043 2043 893 2 GKLSAEENPDDSEVPSSSGINSTK EKKSLQEKGKLSAEEN SSGINSTKSQDKDVNE K G K T K S 1 0 2 2 0 0 3 2 0 1 1 2 0 0 2 6 1 0 0 1 0 0 24 1 2447.13 Q9Y5Q9 Q9Y5Q9 40 63 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 3 0.012779 43.768 By MS/MS By matching 1 1 15764000 15324000 440220 1036 2170 1111 2432;2433 2044 2044 3153 1 GKSPVPKSPVEEK PKSPVEEKGKSPVPKS PKSPVEEKGKSPVPKS K G K E K G 0 0 0 0 0 0 2 1 0 0 0 3 0 0 3 2 0 0 0 2 0 0 13 2 1380.7613 P07197 P07197 626 638 NEFM Neurofilament medium polypeptide yes no 2 0.007253 71.03 By MS/MS 2 0 0 0 1037 1229 1112 2434;2435 2045;2046 2046 1622 2 GKTPEEIRK KTVANMIKGKTPEEIR KTPEEIRKTFNIKNDF K G K R K T 0 1 0 0 0 0 2 1 0 1 0 2 0 0 1 0 1 0 0 0 0 0 9 2 1056.5928 F8W8N3;E7ERH2;E5RJR5;P63208 F8W8N3 129 137 SKP1 S-phase kinase-associated protein 1 yes no 2 0.018902 64.82 By MS/MS 1 1628800 1628800 0 1038 757 1113 2436 2047 2047 3483 1 GLAAGSAETLPANFR KFRPKDIRGLAAGSAE ETLPANFRVTSSMSSP R G L F R V 4 1 1 0 0 0 1 2 0 0 2 0 0 1 1 1 1 0 0 0 0 0 15 0 1473.7576 Q13136 Q13136 1151 1165 PPFIA1 Liprin-alpha-1 yes yes 2 3.2356E-23 139.66 By MS/MS By MS/MS 1 1 20390000 10064000 10326000 1039 1492 1114 2437;2438 2048;2049 2048 3739 2 GLAEVQQDGEAEEGATSDGEK EEITCLEKGLAEVQQD GATSDGEKKREGVTPW K G L E K K 3 0 0 2 0 2 5 4 0 0 1 1 0 0 0 1 1 0 0 1 0 0 21 0 2118.9189 Q02952 Q02952 582 602 AKAP12 A-kinase anchor protein 12 yes yes 2 2.9296E-71 151.41 By matching By MS/MS 1 1 17070000 7807900 9262200 1040 1457 1115 2439;2440 2050 2050 1951;3727 1 GLAEVQQDGEAEEGATSDGEKKR EEITCLEKGLAEVQQD TSDGEKKREGVTPWAS K G L K R E 3 1 0 2 0 2 5 4 0 0 1 2 0 0 0 1 1 0 0 1 0 0 23 2 2403.115 Q02952 Q02952 582 604 AKAP12 A-kinase anchor protein 12 yes yes 3 0.0011687 84.646 By MS/MS By matching 1 1 48257000 18722000 29535000 1041 1457 1116 2441;2442 2051 2051 1951;3727 1 GLAGPPASPGK GTPTLPPKGLAGPPAS GPPASPGKAQPPKPER K G L G K A 2 0 0 0 0 0 0 3 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 0 950.51853 Q9P206 Q9P206 538 548 KIAA1522 Uncharacterized protein KIAA1522 yes yes 2 0.0064583 68.371 By MS/MS By MS/MS 1 1 2958100 1495500 1462600 1042 2086 1117 2443;2444 2052;2053 2053 2993 2 GLAITFVSDENDAK RAGRFGTKGLAITFVS VSDENDAKILNDVQDR K G L A K I 2 0 1 2 0 0 1 1 0 1 1 1 0 1 0 1 1 0 0 1 0 0 14 0 1478.7253 A0A0G2JJZ9;O00148;Q13838;H0Y400 A0A0G2JJZ9 285 298 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.0068608 63.694 By MS/MS By MS/MS 1 1 1349400 552730 796670 1043 243 1118 2445;2446 2054;2055 2055 2 GLDKEVSYNWDPK LPGKFLGRGLDKEVSY VSYNWDPKDAASKPSG R G L P K D 0 0 1 2 0 0 1 1 0 0 1 2 0 0 1 1 0 1 1 1 0 0 13 1 1549.7413 O14654 O14654 840 852 IRS4 Insulin receptor substrate 4 yes yes 2 1.6416E-39 155.26 By MS/MS By MS/MS 1 1 7295400 3216400 4079000 1044 1094 1119 2447;2448 2056;2057 2057 1453;4229 1 GLFYYYANEKSKQPK KRWCVVSRGLFYYYAN NEKSKQPKGTFLIKGY R G L P K G 1 0 1 0 0 1 1 1 0 0 1 3 0 1 1 1 0 0 3 0 0 0 15 2 1834.9254 Q86WV1 Q86WV1 138 152 SKAP1 Src kinase-associated phosphoprotein 1 yes yes 2 0.018323 49.35 By MS/MS 1 0 0 0 1045 1736 1120 2449 2058 2058 4384;4385;4386 1 GLGEHEMEEDEEDYESSAK RGSRLLVRGLGEHEME EDYESSAKLLGMSFMN R G L A K L 1 0 0 2 0 0 7 2 1 0 1 1 1 0 0 2 0 0 1 0 0 0 19 0 2182.8485 Q9UIQ6 Q9UIQ6 57 75 LNPEP Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form yes yes 3 0.0043699 69.422 By MS/MS 1 0 0 0 1046 2101 1121 2450 2059 2059 4455 1 GLGHPPSSPLLK SPPGFSAKGLGHPPSS PPSSPLLKKTPLALAG K G L L K K 0 0 0 0 0 0 0 2 1 0 3 1 0 0 3 2 0 0 0 0 0 0 12 0 1201.6819 B9EGQ5;M0QXA7;O95785 B9EGQ5 157 168 WIZ Protein Wiz yes no 2 0.0014624 84.188 By MS/MS By MS/MS 1 1 3805500 1780000 2025500 1047 423 1122 2451;2452 2060;2061;2062 2062 590;591 3 GLGPPSPPAPPR SLPGSPSRGLGPPSPP PSPPAPPRGPAGEAGA R G L P R G 1 1 0 0 0 0 0 2 0 0 1 0 0 0 6 1 0 0 0 0 0 0 12 0 1141.6244 A0A140TA73;Q13425 A0A140TA73 90 101 SNTB2 Beta-2-syntrophin yes no 2 0.0023434 76.24 By MS/MS By MS/MS 1 1 4969800 2383300 2586500 1048 285 1123 2453;2454 2063;2064 2064 402 2 GLGTDEDSLIEIICSR SELKASMKGLGTDEDS LIEIICSRTNQELQEI K G L S R T 0 1 0 2 1 0 2 2 0 3 2 0 0 0 0 2 1 0 0 0 0 0 16 0 1776.8564 H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;A6NMY6;H0YLE2;H0YN52;H0YNA0;H0YN28;H0YL33;H0YNP5;H0YM50 H0YMM1 120 135 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 2 3.7518E-13 110.08 By MS/MS 1 2300200 2300200 0 1049 893 1124 2455 2065 2065 1 GLKDMELDSSSIEK MNGYAVTRGLKDMELD LDSSSIEKRFAFGFLQ R G L E K R 0 0 0 2 0 0 2 1 0 1 2 2 1 0 0 3 0 0 0 0 0 0 14 1 1550.7498 M0R014;P21817 M0R014 758 771 RYR1 Ryanodine receptor 1 yes no 3 0.00016154 79.089 By MS/MS 2 0 0 0 1050 1068 1125 2456;2457 2066;2067 2067 1405;1406 2 GLKEGMNPSYDEYADSDEDQHDAYLER KKLNIKNRGLKEGMNP QHDAYLERMKEEGKIR R G L E R M 2 1 1 5 0 1 4 2 1 0 2 1 1 0 1 2 0 0 3 0 0 0 27 1 3146.3047 Q08945 Q08945 429 455 SSRP1 FACT complex subunit SSRP1 yes yes 3;4 0.00012623 61.109 By MS/MS By MS/MS 4 4 49485000 22683000 26802000 1051 1471 1126;1127 2458;2459;2460;2461;2462;2463;2464;2465 2068;2069;2070;2071 2068 201 1980;1981;4333 4 GLKPGVVYEGQLISIQQYGHQEVTR HLNSYTIKGLKPGVVY YGHQEVTRFDFTTTST K G L T R F 0 1 0 0 0 4 2 4 1 2 2 1 0 0 1 1 1 0 2 3 0 0 25 1 2798.4715 P02751 P02751 670 694 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 4 0.00072484 58.015 By MS/MS 1 855110 855110 0 1052 1212 1128 2466 2072 2072 1 GLLINQQSVKLRGYR HRLSEVRKGLLINQQS SVKLRGYRPKSEKVPD K G L Y R P 0 2 1 0 0 2 0 2 0 1 3 1 0 0 0 1 0 0 1 1 0 0 15 2 1744.0108 Q8IYK2 Q8IYK2 171 185 CCDC105 Coiled-coil domain-containing protein 105 yes yes 2 0.020072 43.282 By MS/MS 1 0 0 0 1053 1763 1129 2467 2073 2073 246 2481;4392 1 GLLYDSDEEDEERPAR RGLGRMRRGLLYDSDE EDEERPARKRRQVERA R G L A R K 1 2 0 3 0 0 4 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 16 1 1892.8388 P49736 P49736 134 149 MCM2 DNA replication licensing factor MCM2 yes yes 2 2.5037E-46 150.12 By MS/MS By matching 1 1 450260000 218950000 231310000 1054 1381 1130 2468;2469 2074 2074 1843 1 GLLYDSDEEDEERPARK RGLGRMRRGLLYDSDE DEERPARKRRQVERAT R G L R K R 1 2 0 3 0 0 4 1 0 0 2 1 0 0 1 1 0 0 1 0 0 0 17 2 2020.9338 P49736 P49736 134 150 MCM2 DNA replication licensing factor MCM2 yes yes 3 0.0093006 55.724 By matching By MS/MS 1 1 50864000 758070 50106000 1055 1381 1131 2470;2471 2075 2075 1843 1 GLMAGGRPEGQYSEDEDTDTDEYKEAK AAGLLAARGLMAGGRP TDEYKEAKASINPVTG R G L A K A 2 1 0 4 0 1 5 4 0 0 1 2 1 0 1 1 2 0 2 0 0 0 27 2 2990.2724 H0YE35;Q9NPQ8;H0YC88 H0YE35 32 58 RIC8A Synembryn-A yes no 3 8.354E-06 66.77 By MS/MS By matching 1 1 11790000 8991900 2798100 1056 878 1132 2472;2473 2076 2076 1183 1 GLNEAAIKNVYLK KAKEDQWRGLNEAAIK AIKNVYLKVRGLKEGV R G L L K V 2 0 2 0 0 0 1 1 0 1 2 2 0 0 0 0 0 0 1 1 0 0 13 1 1431.8086 A8MX12;P52179 A8MX12 856 868 MYOM1 Myomesin-1 yes no 2 0.0059648 63.216 By MS/MS 1 1998200 0 1998200 1057 342 1133 2474 2077 2077 58 4075 1 GLNSSFETSPK SSFQGSKRGLNSSFET SSFETSPKKVKWSSTV R G L P K K 0 0 1 0 0 0 1 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 11 0 1165.5615 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63 M0QZ79 51 61 VRK3 Inactive serine/threonine-protein kinase VRK3 yes no 2 6.7741E-44 165.35 By MS/MS By MS/MS 1 1 8235600 4588600 3647000 1058 1057 1134 2475;2476 2078;2079 2078 1395;3583 2 GLQHLYALVLVNNK ELRKDDFKGLQHLYAL ALVLVNNKISKIHEKA K G L N K I 1 0 2 0 0 1 0 1 1 0 4 1 0 0 0 0 0 0 1 2 0 0 14 0 1580.9039 P21810 P21810 112 125 BGN Biglycan yes yes 3 0.0057665 48.704 By MS/MS By MS/MS 1 1 1949600 1297400 652230 1059 1303 1135 2477;2478 2080;2081 2081 2 GLRDSHSSEEDEASSQTDLSQTISKK PSPVMTRRGLRDSHSS LSQTISKKTVRSIQEA R G L K K T 1 1 0 3 0 2 3 1 1 1 2 2 0 0 0 7 2 0 0 0 0 0 26 2 2834.3166 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 29 54 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 4 0.0067036 41.703 By MS/MS By matching 1 1 3798200 2096400 1701800 1060 164 1136 2479;2480 2082 2082 223;224 1 GLSDHVSLDGQELGTR CDSVEHLRGLSDHVSL DGQELGTRSGGRRGSD R G L T R S 0 1 0 2 0 1 1 3 1 0 3 0 0 0 0 2 1 0 0 1 0 0 16 0 1682.8224 Q7L8J4 Q7L8J4 356 371 SH3BP5L SH3 domain-binding protein 5-like yes yes 2;3 0.0016324 63.998 By MS/MS By MS/MS 2 2 5802900 3077000 2725900 1061 1706 1137 2481;2482;2483;2484 2083;2084;2085 2085 2385 3 GLSEDTTEETLK PSKTLFVKGLSEDTTE DTTEETLKESFDGSVR K G L L K E 0 0 0 1 0 0 3 1 0 0 2 1 0 0 0 1 3 0 0 0 0 0 12 0 1321.6249 P19338;H7BY16 P19338 578 589 NCL Nucleolin yes no 2 0.0064308 66.538 By MS/MS By MS/MS 1 1 1827000 777760 1049200 1062 1294 1138 2485;2486 2086;2087 2086 1702 2 GLSSAGGGSPHREDAQPEHSASAR KINYSVLRGLSSAGGG PEHSASARKLSRRRTP R G L A R K 4 2 0 1 0 1 2 4 2 0 1 0 0 0 2 5 0 0 0 0 0 0 24 1 2360.0854 Q92994 Q92994 545 568 BRF1 Transcription factor IIIB 90 kDa subunit yes yes 4 0.0069125 44.106 By matching By MS/MS 1 1 23960000 10292000 13668000 1063 1871 1139 2487;2488 2088 2088 2645 1 GLSSSEKDNIER SWVSPRKRGLSSSEKD SEKDNIERQAIENCER R G L E R Q 0 1 1 1 0 0 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 12 1 1333.6474 Q8IYH5 Q8IYH5 87 98 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.011446 70.68 By MS/MS By matching 1 1 12354000 6725600 5628200 1064 1762 1140 2489;2490 2089 2089 2479 1 GLSVDSAQEVK SVSSSIKRGLSVDSAQ VDSAQEVKRFRTATGA R G L V K R 1 0 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 11 0 1131.5772 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1771 1781 TRRAP Transformation/transcription domain-associated protein yes no 2 1.6635E-05 117.79 By MS/MS By MS/MS 1 1 6948800 3355600 3593200 1065 690 1141 2491;2492 2090;2091 2091 927 2 GLTLLFASGDSGAGCWSVSGR ELMKAAARGLTLLFAS GCWSVSGRHQFRPTFP R G L G R H 2 1 0 1 1 0 0 5 0 0 3 0 0 1 0 4 1 1 0 1 0 0 21 0 2096.9949 O14773 O14773 351 371 TPP1 Tripeptidyl-peptidase 1 yes yes 2 0.0026046 76.358 By matching By MS/MS 1 1 5207400 3322700 1884600 1066 1096 1142 2493;2494 2092;2093 2093 2 GLTSLYGLILNNNK EIKENDFKGLTSLYGL GLILNNNKLTKIHPKA K G L N K L 0 0 3 0 0 0 0 2 0 1 4 1 0 0 0 1 1 0 1 0 0 0 14 0 1518.8406 Q9BXN1;Q5TBF2 Q9BXN1 124 137 ASPN Asporin yes no 2 2.1512E-13 120.09 By MS/MS By MS/MS 1 1 3309400 2180100 1129300 1067 1974 1143 2495;2496 2094;2095 2094 2 GLWSTDSAEEDKETK RRLSGEERGLWSTDSA AEEDKETKRNESKEKY R G L T K R 1 0 0 2 0 0 3 1 0 0 1 2 0 0 0 2 2 1 0 0 0 0 15 1 1694.7635 A0A0A0MT47;Q99549 A0A0A0MT47 171 185 MPHOSPH8 M-phase phosphoprotein 8 yes no 3 0.0053744 55.688 By MS/MS By matching 1 1 3246500 1751100 1495400 1068 172 1144 2497;2498 2096 2096 239 1 GLYDGPVCEVSVTPK AELRGVPRGLYDGPVC CEVSVTPKTVTPASSA R G L P K T 0 0 0 1 1 0 1 2 0 0 1 1 0 0 2 1 1 0 1 3 0 0 15 0 1619.7865 A0A1C7CYX9;Q16555 A0A1C7CYX9 602 616 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 4.001E-05 97.291 By MS/MS By MS/MS 1 1 6352100 3278400 3073700 1069 306 1145 2499;2500 2097;2098 2098 3316 2 GMGSLDAMDK GIRLKKYRGMGSLDAM GSLDAMDKHLSSQNRY R G M D K H 1 0 0 2 0 0 0 2 0 0 1 1 2 0 0 1 0 0 0 0 0 0 10 0 1023.4365 H0Y4R1;P12268 H0Y4R1 369 378 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 2 0.0054622 80.245 By MS/MS By MS/MS 1 1 3813000 1372300 2440700 1070 826 1146 2501;2502 2099;2100 2099 1109 2 GMKDDDYDDQLC DFARLRLKGMKDDDYD DDYDDQLC________ K G M L C - 0 0 0 5 1 1 0 1 0 0 1 1 1 0 0 0 0 0 1 0 0 0 12 1 1473.5388 Q68DZ5;P32121 Q68DZ5 206 217 DKFZp686L0365;ARRB2 Beta-arrestin-2 yes no 2 0.022286 46.462 By MS/MS 1 0 0 0 1071 1333 1147 2503 2101 2101 174 4283 1 GMLTQQEIR QRKALKTRGMLTQQEI MLTQQEIRSIHVKRHL R G M I R S 0 1 0 0 0 2 1 1 0 1 1 0 1 0 0 0 1 0 0 0 0 0 9 0 1074.5492 Q5TEA3 Q5TEA3 1098 1106 C20orf194 Uncharacterized protein C20orf194 yes yes 2 0.021409 57.785 By MS/MS By matching 1 1 1502600 573940 928700 1072 1638 1148 2504;2505 2102 2102 238 3804 1 GMSVYGLGR TNKVASQKGMSVYGLG MSVYGLGRQVYDPKYC K G M G R Q 0 1 0 0 0 0 0 3 0 0 1 0 1 0 0 1 0 0 1 1 0 0 9 0 938.46439 Q15417 Q15417 257 265 CNN3 Calponin-3 yes yes 2 0.0043986 82.671 By MS/MS By MS/MS 1 1 7504900 3429300 4075600 1073 1555 1149 2506;2507 2103;2104 2103 4358 2 GNAEGSSDEEGKLVIDEPAK AEGDGDKKGNAEGSSD LVIDEPAKEKNEKGAL K G N A K E 2 0 1 2 0 0 4 3 0 1 1 2 0 0 1 2 0 0 0 1 0 0 20 1 2043.9597 P51858 P51858 127 146 HDGF Hepatoma-derived growth factor yes yes 2 0.0052733 71.742 By MS/MS By matching 1 1 14361000 6106600 8254100 1074 1396 1150 2508;2509 2105 2105 1885;1886 1 GNDPLTSSPGR SSPAQRRRGNDPLTSS PLTSSPGRSSRRTDAL R G N G R S 0 1 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 11 0 1099.5258 P49736;C9J013;C9JZ21;F8WDM3 P49736 20 30 MCM2 DNA replication licensing factor MCM2 yes no 2 1.8655E-143 201.09 By MS/MS By MS/MS 2 2 77823000 35894000 41930000 1075 1381 1151;1152 2510;2511;2512;2513 2106;2107;2108;2109;2110 2107 1844;1845 4 GNIETTSEDGQVFSPK EDDVGIERGNIETTSE DGQVFSPKKGQKKKSI R G N P K K 0 0 1 1 0 1 2 2 0 1 0 1 0 1 1 2 2 0 0 1 0 0 16 0 1707.7952 Q5T200 Q5T200 980 995 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 4.2978E-24 127.3 By MS/MS By MS/MS 1 1 13323000 6184200 7138800 1076 1624 1153 2514;2515 2111;2112;2113;2114 2111 2254 4 GNQMPLK LQSSRIEKGNQMPLKR KGNQMPLKRFSMEGIS K G N L K R 0 0 1 0 0 1 0 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 7 0 786.40581 Q99689 Q99689 307 313 FEZ1 Fasciculation and elongation protein zeta-1 yes yes 2 0.018321 60.358 By MS/MS By matching 1 1 260220000 127070000 133150000 1077 1943 1154 2516;2517 2115 2115 277 284 1 GNSRPGTPSAEGGSTSSTLR KPSGGSSRGNSRPGTP GSTSSTLRAAASKLEQ R G N L R A 1 2 1 0 0 0 1 4 0 0 1 0 0 0 2 5 3 0 0 0 0 0 20 1 1917.914 M0QXD6;P35269 M0QXD6 299 318 GTF2F1 General transcription factor IIF subunit 1 yes no 3 0.0084057 72.916 By MS/MS By matching 1 1 8412600 3620900 4791800 1078 1056 1155 2518;2519 2116 2116 3580 1 GPAGEAGASPPVR PSPPAPPRGPAGEAGA AGASPPVRRVRVVKQE R G P V R R 3 1 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 13 0 1164.5887 A0A140TA73;Q13425 A0A140TA73 102 114 SNTB2 Beta-2-syntrophin yes no 2 1.7022E-07 113.54 By MS/MS By MS/MS 1 1 4855100 2326300 2528800 1079 285 1156 2520;2521 2117;2118 2118 403 2 GPAGEAGASPPVRR PSPPAPPRGPAGEAGA GASPPVRRVRVVKQEA R G P R R V 3 2 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 14 1 1320.6898 A0A140TA73;Q13425 A0A140TA73 102 115 SNTB2 Beta-2-syntrophin yes no 2 4.8275E-13 119.77 By MS/MS By MS/MS 1 1 5825000 3004200 2820700 1080 285 1157 2522;2523 2119;2120 2120 403 2 GPAYGLSR ________________ GPAYGLSREVQQKIEK R G P S R E 1 1 0 0 0 0 0 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 8 0 819.4239 P37802;X6RJP6 P37802 5 12 TAGLN2 Transgelin-2 yes no 2 0.0037551 87.754 By MS/MS By MS/MS 3 2 629470 0 629470 1081 1344 1158 2524;2525;2526;2527;2528 2121;2122;2123;2124;2125;2126 2125 4287 6 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK IFHGVGTRGPGAPGLA PQAVPLEKSQASMVIN R G P E K S 5 0 0 2 0 3 4 5 1 0 3 2 0 0 4 2 1 0 0 2 0 0 34 1 3382.6641 Q14676 Q14676 360 393 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 4 0.00039141 45.325 By MS/MS By matching 1 1 27878000 18491000 9386300 1082 1523 1159 2529;2530 2127 2127 2091 1 GPGEPDSPTPLHPPTPPILSTDR IIPAPKPKGPGEPDSP PPILSTDRSREDSPEL K G P D R S 0 1 0 2 0 0 1 2 1 1 2 0 0 0 8 2 3 0 0 0 0 0 23 0 2377.1914 Q03164 Q03164 1831 1853 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 0.0027947 55.67 By MS/MS By MS/MS 1 1 4297300 861210 3436100 1083 1459 1160 2531;2532 2128;2129 2129 1954;3729 2 GPPASSPAPAPK SLANTQPRGPPASSPA SSPAPAPKFSPVTPKF R G P P K F 3 0 0 0 0 0 0 1 0 0 0 1 0 0 5 2 0 0 0 0 0 0 12 0 1075.5662 H0Y2Y8;Q15942;H7C3D3 H0Y2Y8 222 233 ZYX Zyxin yes no 2 0.0013494 89.266 By MS/MS By MS/MS 1 1 2209100 1071800 1137300 1084 816 1161 2533;2534 2130;2131 2130 1095 2 GPPDFSSDEEREPTPVLGSGAAAAGR LPAGTNSKGPPDFSSD SGAAAAGRSRAAVGRK K G P G R S 4 2 0 2 0 0 3 4 0 0 1 0 0 1 4 3 1 0 0 1 0 0 26 1 2569.2045 G5E972;P42167;P42166 G5E972 61 86 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 3 5.605E-06 84.707 By MS/MS By MS/MS 5 5 122070000 62800000 59268000 1085 808;1354 1162;1163;1164 2535;2536;2537;2538;2539;2540;2541;2542;2543;2544 2132;2133;2134;2135;2136;2137;2138;2139;2140;2141;2142;2143;2144;2145;2146 2133 1073;1074;1075;3501 15 GPPQSPVFEGVYNNSR ARGQSTGKGPPQSPVF EGVYNNSRMLHFLTAV K G P S R M 0 1 2 0 0 1 1 2 0 0 0 0 0 1 3 2 0 0 1 2 0 0 16 0 1746.8325 H3BUF6;Q8WWM7;H3BSK9 H3BUF6 107 122 ATXN2L Ataxin-2-like protein yes no 2 0.002054 69.805 By MS/MS By MS/MS 1 1 5768300 2770100 2998200 1086 935 1165 2545;2546 2147;2148;2149 2148 1253 3 GPPSPPAPVMHSPSR KINKKIPRGPPSPPAP PVMHSPSRKMTVKEQQ R G P S R K 1 1 0 0 0 0 0 1 1 0 0 0 1 0 6 3 0 0 0 1 0 0 15 0 1512.7507 G3V4X8;G3V3A4;Q13573 G3V4X8 59 73 SNW1 SNW domain-containing protein 1 yes no 2;3 7.801E-06 94.781 By MS/MS By MS/MS 4 5 17621000 8925800 8695500 1087 790 1166;1167 2547;2548;2549;2550;2551;2552;2553;2554;2555 2150;2151;2152;2153;2154;2155;2156;2157;2158;2159 2157 96 1049;1050;1051 10 GPPSPPAPVMHSPSRK KINKKIPRGPPSPPAP VMHSPSRKMTVKEQQE R G P R K M 1 1 0 0 0 0 0 1 1 0 0 1 1 0 6 3 0 0 0 1 0 0 16 1 1640.8457 G3V4X8;G3V3A4;Q13573 G3V4X8 59 74 SNW1 SNW domain-containing protein 1 yes no 3 0.00032273 88.945 By MS/MS By MS/MS 2 2 24019000 13961000 10058000 1088 790 1168;1169 2556;2557;2558;2559 2160;2161;2162;2163;2164;2165;2166;2167;2168;2169 2169 96 1049;1050;1051 10 GPQPPTVSPIR QKQNDTPKGPQPPTVS PPTVSPIRSSRPPPAK K G P I R S 0 1 0 0 0 1 0 1 0 1 0 0 0 0 4 1 1 0 0 1 0 0 11 0 1147.635 P46087 P46087 779 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 7.9773E-07 128.57 By MS/MS By MS/MS 1 1 24553000 12089000 12464000 1089 1363 1170 2560;2561 2170;2171;2172;2173 2173 1794;3690 4 GPSPSPVGSPASVAQSR SPHLPGIRGPSPSPVG PASVAQSRSGPLSPAA R G P S R S 2 1 0 0 0 1 0 2 0 0 0 0 0 0 4 5 0 0 0 2 0 0 17 0 1579.7954 O14497;A0A087WUV6;H0Y488;A0A1B0GTU5 O14497 694 710 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 0.0023334 69.331 By MS/MS By MS/MS 1 1 2799400 1350300 1449100 1090 1091 1171 2562;2563 2174;2175 2174 1434 2 GPSSVEDIK EKTPKTPKGPSSVEDI PSSVEDIKAKMQASIE K G P I K A 0 0 0 1 0 0 1 1 0 1 0 1 0 0 1 2 0 0 0 1 0 0 9 0 930.46583 P06748 P06748 240 248 NPM1 Nucleophosmin yes yes 2 0.0038625 88.056 By MS/MS By MS/MS 1 1 3461200 1722300 1738900 1091 1228 1172 2564;2565 2176;2177 2176 1618 2 GPVSGTEPEPVYSMEAADYR FKAELSYRGPVSGTEP SMEAADYREASSQQGL R G P Y R E 2 1 0 1 0 0 3 2 0 0 0 0 1 0 3 2 1 0 2 2 0 0 20 0 2153.9575 Q14247;H0YEV2;H0YCD9 Q14247 435 454 CTTN Src substrate cortactin yes no 2;3 0.00071239 78.917 By MS/MS By MS/MS 4 5 32676000 13818000 18859000 1092 1519 1173;1174;1175 2566;2567;2568;2569;2570;2571;2572;2573;2574 2178;2179;2180;2181;2182;2183;2184;2185;2186 2180 214 2081;4350;4351 7 GQEYLILEK GHDLRLERGQEYLILE QEYLILEKNDVHWWRA R G Q E K N 0 0 0 0 0 1 2 1 0 1 2 1 0 0 0 0 0 0 1 0 0 0 9 0 1091.5863 P42680 P42680 203 211 TEC Tyrosine-protein kinase Tec yes yes 2 0.020197 48.794 By MS/MS 1 0 0 0 1093 1357 1176 2575 2187 2187 4292 1 GQKSPGALETPSAAGSQGNTASQGK DSGASAAKGQKSPGAL GNTASQGKEGPYSEPS K G Q G K E 4 0 1 0 0 3 1 5 0 0 1 2 0 0 2 4 2 0 0 0 0 0 25 1 2328.1306 Q9Y2D5;C9JVY5 Q9Y2D5 390 414 AKAP2 A-kinase anchor protein 2 yes no 3 0.013832 42.166 By matching By MS/MS 1 1 5157900 2597900 2560000 1094 2142 1177 2576;2577 2188 2188 3107 1 GQSKTHTINAYHLDPR LSTSPSDKGQSKTHTI NAYHLDPRGPKSELEH K G Q P R G 1 1 1 1 0 1 0 1 2 1 1 1 0 0 1 1 2 0 1 0 0 0 16 1 1836.9231 Q96F81 Q96F81 1166 1181 DISP1 Protein dispatched homolog 1 yes yes 3 0.018018 42.314 By matching By MS/MS 1 1 3491000 1287000 2204000 1095 1890 1178 2578;2579 2189 2189 4418 0 GQSQLSNPTDDSWK IDKNPSERGQSQLSNP NPTDDSWKGRPYANQK R G Q W K G 0 0 1 2 0 2 0 1 0 0 1 1 0 0 1 3 1 1 0 0 0 0 14 0 1561.7009 Q9Y6D5 Q9Y6D5 1523 1536 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.00042969 76.358 By MS/MS By MS/MS 1 1 3765100 1397000 2368200 1096 2176 1179 2580;2581 2190;2191;2192;2193 2191 3162;3986 4 GQSTGKGPPQSPVFEGVYNNSR AAAIGSARGQSTGKGP EGVYNNSRMLHFLTAV R G Q S R M 0 1 2 0 0 2 1 4 0 0 0 1 0 1 3 3 1 0 1 2 0 0 22 1 2305.1087 H3BUF6;Q8WWM7 H3BUF6 101 122 ATXN2L Ataxin-2-like protein yes no 3 0.014641 44.278 By MS/MS 1 1334000 1334000 0 1097 935 1180 2582 2194 2194 1253 1 GQTPLTEGSEDLDGHSDPEESFAR NGTFNLSRGQTPLTEG DPEESFARDLPDFPSI R G Q A R D 1 1 0 3 0 1 4 3 1 0 2 0 0 1 2 3 2 0 0 0 0 0 24 0 2573.1154 K7EQI9;Q86VR2 K7EQI9 208 231 FAM134C Protein FAM134C yes no 3 0.017032 40.994 By matching By MS/MS 1 1 7239300 3370500 3868800 1098 1052 1181 2583;2584 2195 2195 1389 1 GRASSHSSQTQGGGSVTK SPTSQRSRGRASSHSS QGGGSVTKKRKLESTE R G R T K K 1 1 0 0 0 2 0 4 1 0 0 1 0 0 0 5 2 0 0 1 0 0 18 1 1730.8296 Q3BDU5;P02545;A0A0C4DGC5;Q5TCI8 Q3BDU5 400 417 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0023743 62.438 By MS/MS By MS/MS 1 1 2335700 1180400 1155300 1099 1211 1182 2585;2586 2196;2197 2196 1608;1609 2 GRDSPYQSR SRSRSGSRGRDSPYQS RDSPYQSRGSPHYFSP R G R S R G 0 2 0 1 0 1 0 1 0 0 0 0 0 0 1 2 0 0 1 0 0 0 9 1 1064.4999 Q13242 Q13242 201 209 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 2 0.0013491 96.034 By matching By MS/MS 1 1 5285000 2536700 2748300 1100 1496 1183 2587;2588 2198 2198 4343 1 GRDYCSEEEDIT MLDEKIEKGRDYCSEE CSEEEDIT________ K G R I T - 0 1 0 2 1 0 3 1 0 1 0 0 0 0 0 1 1 0 1 0 0 0 12 1 1472.5726 Q9H246 Q9H246 110 121 C1orf21 Uncharacterized protein C1orf21 yes yes 2 0.0035765 85.536 By matching By MS/MS 1 1 8019600 3655200 4364400 1101 1995 1184 2589;2590 2199 2199 2852 1 GREVSPSDVR IKHVRRVRGREVSPSD EVSPSDVREDSNLESS R G R V R E 0 2 0 1 0 0 1 1 0 0 0 0 0 0 1 2 0 0 0 2 0 0 10 1 1100.5574 Q8WYP5 Q8WYP5 1940 1949 AHCTF1 Protein ELYS yes yes 2 0.0045541 88.155 By MS/MS By MS/MS 1 1 3303500 1678000 1625500 1102 1845 1185 2591;2592 2200;2201 2201 2597 2 GRLGSVDSFER SRGANRMRGRLGSVDS GSVDSFERSNSLASEK R G R E R S 0 2 0 1 0 0 1 2 0 0 1 0 0 1 0 2 0 0 0 1 0 0 11 1 1221.6102 O60343;Q5JU47 O60343 584 594 TBC1D4 TBC1 domain family member 4 yes no 3 0.0026269 74.475 By MS/MS By MS/MS 1 1 1170700 593640 577040 1103 1138 1186 2593;2594 2202;2203 2202 1514 2 GRLSPVPVPR YDRLFDYRGRLSPVPV LSPVPVPRAVPVKRPR R G R P R A 0 2 0 0 0 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 1 1076.6455 Q5QPM0;Q5QPM1;Q5QPL9;Q9UKM9 Q5QPM0 66 75 RALY RNA-binding protein Raly yes no 3 0.017549 52.071 By matching By MS/MS 1 1 2557400 1028400 1529000 1104 1614 1187 2595;2596 2204 2204 2243 1 GRNSATSADEQPHIGNYR ________________ QPHIGNYRLLKTIGKG R G R Y R L 2 2 2 1 0 1 1 2 1 1 0 0 0 0 1 2 1 0 1 0 0 0 18 1 1971.9147 E7ETY4;E9PC69;F5H4J8;F5H6N2;F5H4F6;Q7KZI7 E7ETY4 4 21 MARK2 Serine/threonine-protein kinase MARK2 yes no 3 0.0016867 66.889 By MS/MS By MS/MS 1 1 13395000 7410200 5984500 1105 592 1188 2597;2598 2205;2206 2205 804 2 GRPSKTPSPSQPK QSTPQKGRGRPSKTPS TPSPSQPKKNVRVGRS R G R P K K 0 1 0 0 0 1 0 1 0 0 0 2 0 0 4 3 1 0 0 0 0 0 13 2 1365.7365 Q9NTI5 Q9NTI5 1376 1388 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 3 0.0072863 54.524 By MS/MS By matching 1 1 13236000 5556600 7679200 1106 2054 1189 2599;2600 2207 2207 2935;3941 1 GSDFDCELR CLNYQHYKGSDFDCEL SDFDCELRLLIHQSLA K G S L R L 0 1 0 2 1 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1097.4448 P61978;Q5T6W2 P61978 140 148 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.016117 69.598 By MS/MS By matching 1 1 2113300 1219600 893710 1107 1423 1190 2601;2602 2208 2208 1 GSEDSPPKHAGNNESHSSR WHHRKGTKGSEDSPPK NNESHSSRRRNRHSKS K G S S R R 1 1 2 1 0 0 2 2 2 0 0 1 0 0 2 5 0 0 0 0 0 0 19 1 1991.8682 P48651 P48651 438 456 PTDSS1 Phosphatidylserine synthase 1 yes yes 3 0.0033117 61.524 By MS/MS By MS/MS 1 1 8811300 3455000 5356300 1108 1374 1191 2603;2604 2209;2210 2210 1834 2 GSEKEEYFI QMESDLAKGSEKEEYF SEKEEYFI________ K G S F I - 0 0 0 0 0 0 3 1 0 1 0 1 0 1 0 1 0 0 1 0 0 0 9 1 1100.5026 S4R466;Q0VAQ4 S4R466 75 83 SMAGP Small cell adhesion glycoprotein yes no 2 0.019719 65.246 By matching By MS/MS 1 1 4000300 1777700 2222600 1109 1475 1192 2605;2606 2211 2211 4334 1 GSESPNSFLDQESR KQPLPGPKGSESPNSF SFLDQESRRRRFTIAD K G S S R R 0 1 1 1 0 1 2 1 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1551.6801 Q5T4Y8;C9IZX4;Q6P9H4 Q5T4Y8 142 155 CNKSR3 Connector enhancer of kinase suppressor of ras 3 yes no 2 0.008472 59.198 By matching By MS/MS 1 1 1551900 968030 583900 1110 430 1193 2607;2608 2212 2212 612 1 GSETPGATPGSK DETPGRAKGSETPGAT PGATPGSKIWDPTPSH K G S S K I 1 0 0 0 0 0 1 3 0 0 0 1 0 0 2 2 2 0 0 0 0 0 12 0 1087.5146 O75533 O75533 241 252 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0037888 91.202 By matching By MS/MS 1 1 3822600 1770400 2052300 1111 1166 1194 2609;2610 2213 2213 3625 1 GSFSDTGLGDGK DKEKIKEKGSFSDTGL DTGLGDGKMKSDSFAP K G S G K M 0 0 0 2 0 0 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 12 0 1139.5095 Q9Y2W1 Q9Y2W1 376 387 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0014355 85.271 By MS/MS By MS/MS 1 1 18030000 9188100 8841600 1112 2146 1195 2611;2612 2214;2215 2215 3114;3115 2 GSFSSENYWR LLPTHRRRGSFSSENY FSSENYWRKSYESSED R G S W R K 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 3 0 1 1 0 0 0 10 0 1231.5258 K7ER58;Q6P6C2 K7ER58 19 28 ALKBH5 RNA demethylase ALKBH5 yes no 2 0.021884 56.043 By MS/MS By matching 1 1 1815600 941930 873640 1113 1053 1196 2613;2614 2216 2216 1390;1391 1 GSGSPTHSLSQK RRKRGAQKGSGSPTHS PTHSLSQKSTRLSGAA K G S Q K S 0 0 0 0 0 1 0 2 1 0 1 1 0 0 1 4 1 0 0 0 0 0 12 0 1184.5786 I3L2R2;I3L419;I3L156;Q9BSJ6 I3L2R2 20 31 FAM64A Protein FAM64A yes no 2 0.0042922 71.268 By MS/MS By MS/MS 2 2 5966800 3044400 2922400 1114 981 1197 2615;2616;2617;2618 2217;2218;2219 2219 1318 3 GSGTASDDEFENLR RIALPAPRGSGTASDD DDEFENLRIKGPNAVQ R G S L R I 1 1 1 2 0 0 2 2 0 0 1 0 0 1 0 2 1 0 0 0 0 0 14 0 1496.6379 Q7Z6Z7 Q7Z6Z7 1902 1915 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 7.5316E-09 108.9 By MS/MS By MS/MS 1 1 137710000 66915000 70792000 1115 1721 1198 2619;2620 2220;2221 2220 2424 2 GSISSTSEVHSPPNVGLR SNTSRLSRGSISSTSE SPPNVGLRRSGQIEGV R G S L R R 0 1 1 0 0 0 1 2 1 1 1 0 0 0 2 5 1 0 0 2 0 0 18 0 1822.9173 Q8WWQ0 Q8WWQ0 673 690 PHIP PH-interacting protein yes yes 3 0.0018882 64.26 By MS/MS By matching 1 1 2901400 1677800 1223600 1116 1840 1199 2621;2622 2222 2222 2588 1 GSISTPNSPVK MRVSVSSKGSISTPNS STPNSPVKMTLIPSPN K G S V K M 0 0 1 0 0 0 0 1 0 1 0 1 0 0 2 3 1 0 0 1 0 0 11 0 1085.5717 A0A087WW06;Q96AY4 A0A087WW06 1974 1984 TTC28 Tetratricopeptide repeat protein 28 yes no 2 0.015391 58.595 By MS/MS 2 805230 805230 0 1117 58 1200;1201 2623;2624 2223;2224;2225 2224 77;3228 3 GSLASLDSLRK APLAQHERGSLASLDS ASLDSLRKGGPPPPNW R G S R K G 1 1 0 1 0 0 0 1 0 0 3 1 0 0 0 3 0 0 0 0 0 0 11 1 1145.6404 C9JZR2;O60716;E9PKY0 C9JZR2 345 355 CTNND1 Catenin delta-1 yes no 2 0.0035519 89.44 By MS/MS By MS/MS 1 1 6767400 3421200 3346200 1118 495 1202 2625;2626 2226;2227 2226 682 2 GSLGGGFSSGGFSGGSFSR SLRISSSKGSLGGGFS FSGGSFSRGSSGGGCF K G S S R G 0 1 0 0 0 0 0 8 0 0 1 0 0 3 0 6 0 0 0 0 0 0 19 0 1706.7649 CON__P13645;P13645 CON__P13645 41 59 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.006703 63.16 By MS/MS 1 1024400 1024400 0 + 1119 506 1203 2627 2228 2228 1 GSLQAHDTSSLPTVIMR KVKMKQPKGSLQAHDT SLPTVIMRNKPSQPKE K G S M R N 1 1 0 1 0 1 0 1 1 1 2 0 1 0 1 3 2 0 0 1 0 0 17 0 1811.92 A0A087WTD7;A8MYJ1;Q12802;A0A087WY36;A0A087WX73 A0A087WTD7 464 480 AKAP13 A-kinase anchor protein 13 yes no 3 0.0036343 52.19 By MS/MS By matching 1 1 1301300 677450 623890 1120 26 1204 2628;2629 2229 2229 9 27 1 GSLSPVTKPR DWRSPKQRGSLSPVTK LSPVTKPRSQTYPDVG R G S P R S 0 1 0 0 0 0 0 1 0 0 1 1 0 0 2 2 1 0 0 1 0 0 10 1 1040.5978 F5H4N6;Q9Y3R0;F5H4Q7;F5H4P8;H0YFK8 F5H4N6 792 801 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.0054493 97.452 By matching By MS/MS 1 1 4227700 2241100 1986600 1121 715 1205 2630;2631 2230 2230 949 1 GSLSTDKDTAYGSFQNGHGIK GFTSPANRGSLSTDKD FQNGHGIKREDSRGSL R G S I K R 1 0 1 2 0 1 0 4 1 1 1 2 0 1 0 3 2 0 1 0 0 0 21 1 2182.0291 A0A0J9YW64;A6NIW2;Q5JSL3 A0A0J9YW64 1042 1062 DOCK11 Dedicator of cytokinesis protein 11 yes no 3 0.0090874 52.784 By matching By MS/MS 1 1 2971200 713500 2257600 1122 250 1206 2632;2633 2231 2231 350 362;3305 1 GSPDGSLQTGKPSAPK ALKLRSPRGSPDGSLQ TGKPSAPKKLKLDVGE R G S P K K 1 0 0 1 0 1 0 3 0 0 1 2 0 0 3 3 1 0 0 0 0 0 16 1 1525.7736 E7EV54;C9JFV4;Q8IZL8 E7EV54 333 348 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 2 1.8468E-05 96.666 By MS/MS By MS/MS 1 1 70605000 29873000 40732000 1123 462 1207 2634;2635 2232;2233 2232 651 2 GSPGLVVQPSNAAR G S A R 2 1 1 0 0 1 0 2 0 0 1 0 0 0 2 2 0 0 0 2 0 0 14 0 1351.7208 REV__Q9BZD7 yes yes 2 0.0187 52.247 By MS/MS 1 1072700 1072700 0 + 1124 2214 1208 2636 2234 2234 3200 1 GSPHYFSPFRPY RDSPYQSRGSPHYFSP YFSPFRPY________ R G S P Y - 0 1 0 0 0 0 0 1 1 0 0 0 0 2 3 2 0 0 2 0 0 0 12 1 1453.6779 Q13242 Q13242 210 221 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 3 0.019306 49.216 By matching By MS/MS 1 1 3345200 1585100 1760100 1125 1496 1209 2637;2638 2235 2235 2046 1 GSPNTASAEATLPR YSSLREARGSPNTASA SAEATLPRWRAGEQAQ R G S P R W 3 1 1 0 0 0 1 1 0 0 1 0 0 0 2 2 2 0 0 0 0 0 14 0 1370.679 Q6PJG6 Q6PJG6 741 754 BRAT1 BRCA1-associated ATM activator 1 yes yes 2 0.00030441 85.909 By MS/MS By MS/MS 1 1 2463300 1219000 1244400 1126 1685 1210 2639;2640 2236;2237 2236 2355 2 GSPSSHLLGADHGLR GGAALGGRGSPSSHLL LGADHGLRKAKKPKKK R G S L R K 1 1 0 1 0 0 0 3 2 0 3 0 0 0 1 3 0 0 0 0 0 0 15 0 1502.759 F8VU11;Q6NWY9 F8VU11 784 798 PRPF40B Pre-mRNA-processing factor 40 homolog B yes no 3 0.011973 48.623 By MS/MS By MS/MS 1 1 2081800 1065400 1016400 1127 738 1211 2641;2642 2238;2239 2239 982;983 2 GSPTGGAQLLK GSHPQGPRGSPTGGAQ TGGAQLLKRKRKLGVV R G S L K R 1 0 0 0 0 1 0 3 0 0 2 1 0 0 1 1 1 0 0 0 0 0 11 0 1027.5662 Q14684 Q14684 512 522 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.00087538 101.71 By MS/MS By MS/MS 1 1 7537700 3544200 3993500 1128 1526 1212 2643;2644 2240;2241 2240 2097 2 GSSPGPRPVEGTPASR KTKSQTHRGSSPGPRP VEGTPASRTQDPSSPG R G S S R T 1 2 0 0 0 0 1 3 0 0 0 0 0 0 4 3 1 0 0 1 0 0 16 1 1550.7801 Q13112 Q13112 408 423 CHAF1B Chromatin assembly factor 1 subunit B yes yes 3 0.0028752 59.792 By MS/MS By MS/MS 1 1 48930000 26599000 22331000 1129 1490 1213 2645;2646 2242;2243 2243 2034;2035 2 GSSPTPPCSPVQPSK TAEAIGLKGSSPTPPC CSPVQPSKQLEYLARI K G S S K Q 0 0 0 0 1 1 0 1 0 0 0 1 0 0 5 4 1 0 0 1 0 0 15 0 1524.7242 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3 H0YBY0 97 111 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 2 0.0031888 68.329 By MS/MS By matching 1 1 2124400 1801300 323030 1130 177 1214 2647;2648 2244 2244 249;3275 0 GSSSSESQK PQDELGGRGSSSSESQ SSSSESQKPCEALRGL R G S Q K P 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 5 0 0 0 0 0 0 9 0 895.3883 F5H360;F5H4I7;Q96RR4 F5H360 24 32 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 yes no 1 0.019936 41.54 By matching By MS/MS 1 1 1134700 720640 414100 1131 714 1215 2649;2650 2245 2245 947;948 1 GSVPLSSSPPATHFPDETEITNPVPK DLEADDVKGSVPLSSS EITNPVPKKNVTVKKT K G S P K K 1 0 1 1 0 0 2 1 1 1 1 1 0 1 6 4 3 0 0 2 0 0 26 0 2703.3392 P11388 P11388 1386 1411 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.0099978 43.162 By MS/MS 1 7362700 7362700 0 1132 1258 1216 2651 2246 2246 1657;1658;1659 1 GSVSDEEMMELR ________________ DEEMMELREAFAKVDT R G S L R E 0 1 0 1 0 0 3 1 0 0 1 0 2 0 0 2 0 0 0 1 0 0 12 0 1381.5854 Q5TBN5;Q5TBN3;P13796 Q5TBN5 4 15 LCP1 Plastin-2 yes no 2 3.4395E-05 108.35 By MS/MS By MS/MS 3 3 7607700 3034900 4572800 1133 1271 1217;1218 2652;2653;2654;2655;2656;2657 2247;2248;2249;2250 2249 161;162 1673 4 GSYGDLGGPIITTQVTIPK DYSYAGGRGSYGDLGG TTQVTIPKDLAGSIIG R G S P K D 0 0 0 1 0 1 0 4 0 3 1 1 0 0 2 1 3 0 1 1 0 0 19 0 1916.0255 P61978;Q5T6W2;S4R359 P61978 378 396 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.016066 43.798 By matching By MS/MS 1 1 1580300 905520 674770 1134 1423 1219 2658;2659 2251 2251 4322 1 GSYGSDAEEEEYR SRPYQDTRGSYGSDAE DAEEEEYRQQLSEHSK R G S Y R Q 1 1 0 1 0 0 4 2 0 0 0 0 0 0 0 2 0 0 2 0 0 0 13 0 1490.5797 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1214 1226 TJP2 Tight junction protein ZO-2 yes no 2 0.013677 56.569 By MS/MS By matching 1 1 2154900 1033100 1121800 1135 290 1220 2660;2661 2252 2252 411 1 GTDTQTPAVLSPSK LRQNAPPKGTDTQTPA PAVLSPSKTQATLKPK K G T S K T 1 0 0 1 0 1 0 1 0 0 1 1 0 0 2 2 3 0 0 1 0 0 14 0 1400.7147 P46087 P46087 722 735 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0 246.66 By MS/MS By MS/MS 1 1 22978000 10636000 12342000 1136 1363 1221 2662;2663 2253;2254 2253 1795 2 GTDTQTPAVLSPSKTQATLKPK LRQNAPPKGTDTQTPA TQATLKPKDHHQPLGR K G T P K D 2 0 0 1 0 2 0 1 0 0 2 3 0 0 3 2 5 0 0 1 0 0 22 2 2268.2325 P46087 P46087 722 743 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 3 4.4626E-11 101.92 By MS/MS By matching 1 1 14258000 7731800 6526600 1137 1363 1222 2664;2665 2255 2255 1795 1 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTK GTPALNAKGTEAPAVV APRPDHTKSIYTRSVI K G T T K S 4 1 0 4 0 0 6 1 1 1 0 1 0 0 5 0 4 0 0 3 0 0 31 1 3314.5426 Q13177 Q13177 161 191 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 4 0.0010317 45.125 By matching By MS/MS 1 1 3526600 1090600 2436000 1138 1493 1223 2666;2667 2256 2256 3740 1 GTGEAEEEYVGPR VREKRRGRGTGEAEEE EEEYVGPRLSRRILQQ R G T P R L 1 1 0 0 0 0 4 3 0 0 0 0 0 0 1 0 1 0 1 1 0 0 13 0 1392.6157 F8WBL2;Q13895 F8WBL2 41 53 BYSL Bystin yes no 2 0.0012539 72.096 By matching By MS/MS 1 1 1999200 802570 1196600 1139 765 1224 2668;2669 2257 2257 4167 1 GTGQSDDSDIWDDTALIK EDSVLFRRGTGQSDDS WDDTALIKAYDKAVAS R G T I K A 1 0 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 18 0 1935.8698 B4DP61;E7EQZ4;Q16637 B4DP61 24 41 SMN2;SMN1 Survival motor neuron protein yes no 2 0.0014264 88.087 By matching By MS/MS 1 2 30741000 10983000 19758000 1140 377 1225;1226 2670;2671;2672 2258;2259 2258 539;540 2 GTGSSSSGVLMVGPNFR GRSGHNTRGTGSSSSG LMVGPNFRVGKKIGCG R G T F R V 0 1 1 0 0 0 0 4 0 0 1 0 1 1 1 4 1 0 0 2 0 0 17 0 1651.7988 Q9Y6M4 Q9Y6M4 28 44 CSNK1G3 Casein kinase I isoform gamma-3 yes yes 2 0.021453 53.491 By matching By MS/MS 1 1 1291700 636500 655240 1141 2177 1227 2673;2674 2260 2260 316 3163;3164 1 GTHVDLGLASANVDFAFSLYK LTQENQDRGTHVDLGL DFAFSLYKQLVLKAPD R G T Y K Q 3 0 1 2 0 0 0 2 1 0 3 1 0 2 0 2 1 0 1 2 0 0 21 0 2224.1164 P01011;G3V595 P01011 42 62 SERPINA3 Alpha-1-antichymotrypsin;Alpha-1-antichymotrypsin His-Pro-less yes no 3 0.0013404 73.722 By MS/MS By MS/MS 1 2 6011200 3513600 2497600 1142 1205 1228 2675;2676;2677 2261;2262 2261 2 GTIEILSDVQLIK GITTKISRGTIEILSD LSDVQLIKTGDKV___ R G T I K T 0 0 0 1 0 1 1 1 0 3 2 1 0 0 0 1 1 0 0 1 0 0 13 0 1427.8235 F8VPE8;F8VW21;F8VU65;Q8NHW5;P05388 F8VPE8 136 148 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2 0.0008001 86.189 By MS/MS 1 740520 740520 0 1143 732 1229 2678 2263 2263 1 GTPSQSPVVGR APTLHLNKGTPSQSPV SQSPVVGRSQGQQQEK K G T G R S 0 1 0 0 0 1 0 2 0 0 0 0 0 0 2 2 1 0 0 2 0 0 11 0 1083.5673 C9J2I0;B8ZZY2;P52594 C9J2I0 98 108 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 2 0.0027385 83.226 By MS/MS By MS/MS 1 1 5313100 2986500 2326600 1144 420 1230 2679;2680 2264;2265;2266;2267 2267 585 4 GTQGSELDPK PLLLLWTRGTQGSELD QGSELDPKGQHVCVAS R G T P K G 0 0 0 1 0 1 1 2 0 0 1 1 0 0 1 1 1 0 0 0 0 0 10 0 1030.4931 I3L4R9;A0A0A0MR54;Q14162 I3L4R9 16 25 SCARF1 Scavenger receptor class F member 1 yes no 1 0.015332 43.808 By MS/MS 1 3340800 3340800 0 1145 132 1231 2681 2268 2268 180 0 GTRVQVDSSQR LVSVDCKKGTRVQVDS VQVDSSQRMLRIAEPD K G T Q R M 0 2 0 1 0 2 0 1 0 0 0 0 0 0 0 2 1 0 0 2 0 0 11 1 1231.6269 Q9NZV1 Q9NZV1 994 1004 CRIM1 Cysteine-rich motor neuron 1 protein;Processed cysteine-rich motor neuron 1 protein yes yes 2 0.013878 49.715 By matching By MS/MS 1 1 1195200 640400 554770 1146 2081 1232 2682;2683 2269 2269 0 GTSENLPE FMSPQDVRGTSENLPE GTSENLPE________ R G T P E - 0 0 1 0 0 0 2 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 8 0 845.37668 E9PJ68 E9PJ68 252 259 SLC43A1 yes yes 1 0.021959 41.502 By MS/MS By matching 1 1 2578700 1446100 1132600 1147 647 1233 2684;2685 2270 2270 876;3445 0 GTYGILSK SYSSASTRGTYGILSK GTYGILSKTVGTQDTP R G T S K T 0 0 0 0 0 0 0 2 0 1 1 1 0 0 0 1 1 0 1 0 0 0 8 0 837.45962 Q08378 Q08378 327 334 GOLGA3 Golgin subfamily A member 3 yes yes 2 0.0037849 120.46 By MS/MS By MS/MS 1 1 2241100 1109400 1131700 1148 1470 1234 2686;2687 2271;2272 2272 4332 2 GTYVPSSPTR TYGAAAGKGTYVPSSP YVPSSPTRLAYTDDLG K G T T R L 0 1 0 0 0 0 0 1 0 0 0 0 0 0 2 2 2 0 1 1 0 0 10 0 1063.5298 Q9Y4P8 Q9Y4P8 407 416 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 yes yes 2 0.020845 68.676 By MS/MS By matching 1 1 18845000 8662100 10183000 1149 2161 1235 2688;2689 2273 2273 3981 1 GVDDSYPPQKK PIPVVPLRGVDDSYPP DSYPPQKKSFMMLKYM R G V K K S 0 0 0 2 0 1 0 1 0 0 0 2 0 0 2 1 0 0 1 1 0 0 11 1 1232.6037 Q86X52 Q86X52 138 148 CHSY1 Chondroitin sulfate synthase 1 yes yes 2 0.005225 78.149 By MS/MS By matching 1 1 15965000 7385200 8579600 1150 1739 1236 2690;2691 2274 2274 4388 0 GVDEVTIVNILTNR IETAIKTKGVDEVTIV IVNILTNRSNAQRQDI K G V N R S 0 1 2 1 0 0 1 1 0 2 1 0 0 0 0 0 2 0 0 3 0 0 14 0 1541.8413 H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;H0YMD9;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4 H0YMM1 50 63 ANXA2 Annexin;Annexin A2 yes no 2 1.6202E-74 171.67 By MS/MS By MS/MS 1 1 10825000 6532500 4292600 1151 893 1237 2692;2693 2275;2276 2275 2 GVDIYPENLNSK YKFVHVLKGVDIYPEN YPENLNSKKKFGADDK K G V S K K 0 0 2 1 0 0 1 1 0 1 1 1 0 0 1 1 0 0 1 1 0 0 12 0 1347.667 Q9H2B2 Q9H2B2 59 70 SYT4 Synaptotagmin-4 yes yes 2 0.013416 44.863 By MS/MS 1 0 0 0 1152 1996 1238 2694 2277 2277 288;289 2853;4435 1 GVEEEEEDGEMRE CNNVLYIRGVEEEEED EEDGEMRE________ R G V R E - 0 1 0 1 0 0 7 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 13 1 1536.5886 P62306 P62306 74 86 SNRPF Small nuclear ribonucleoprotein F yes yes 2 0.0013667 82.261 By MS/MS By matching 1 1 2768000 850840 1917200 1153 1431 1239 2695;2696 2278 2278 1 GVGYETILK ________________ VGYETILKEQKGQSMF R G V L K E 0 0 0 0 0 0 1 2 0 1 1 1 0 0 0 0 1 0 1 1 0 0 9 0 978.5386 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84 J9JIE0 6 14 GPRC5C G-protein coupled receptor family C group 5 member C yes no 2 0.020861 48.756 By MS/MS 1 405700 0 405700 1154 200 1240 2697 2279 2279 4033 1 GVKIDKTDYMVGSYGPR YIQHTYRKGVKIDKTD MVGSYGPRAEEYEFLT K G V P R A 0 1 0 2 0 0 0 3 0 1 0 2 1 0 1 1 1 0 2 2 0 0 17 2 1884.9404 J3KTF8;J3QQX2;P52565 J3KTF8 136 152 ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 2 0.022239 41.967 By MS/MS 1 6929300 6929300 0 1155 1023 1241 2698 2280 2280 1361;4212 1 GVLGKSPLSALAR HQKALPKKGVLGKSPL SPLSALARKKARLSLV K G V A R K 2 1 0 0 0 0 0 2 0 0 3 1 0 0 1 2 0 0 0 1 0 0 13 1 1267.7612 Q9BQG0;I3L1L3;I3L2H8 Q9BQG0 1285 1297 MYBBP1A Myb-binding protein 1A yes no 2 0.010847 69.352 By MS/MS By matching 1 1 568310 280530 287780 1156 1952 1242 2699;2700 2281 2281 2766 1 GVLTPRGSTVTR PPPPPPGRGVLTPRGS PRGSTVTRGALPVPPV R G V T R G 0 2 0 0 0 0 0 2 0 0 1 0 0 0 1 1 3 0 0 2 0 0 12 1 1242.7044 Q5VWX1 Q5VWX1 219 230 KHDRBS2 KH domain-containing, RNA-binding, signal transduction-associated protein 2 yes yes 2 0.012301 54.982 By matching By MS/MS 1 1 2300100 1145600 1154500 1157 1655 1243 2701;2702 2282 2282 3812;3813 0 GVPAGNSDTEGGQPGR ISVVSATKGVPAGNSD TEGGQPGRKRRWGAST K G V G R K 1 1 1 1 0 1 1 5 0 0 0 0 0 0 2 1 1 0 0 1 0 0 16 0 1497.6808 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;G3V3T3 S4R3H4 774 789 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 2 0.00088078 81.713 By MS/MS By MS/MS 1 1 6629800 3322900 3306900 1158 576;794 1244 2703;2704 2283;2284;2285;2286 2286 766 4 GVQNPCPSARAR RAGKKQLRGVQNPCPS PCPSARARPRHKSLNI R G V A R P 2 2 1 0 1 1 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 12 1 1311.6466 C9IYZ8;C9JAA0;C9IY76;F8WAT8;Q9ULE3 C9IYZ8 27 38 DENND2A DENN domain-containing protein 2A yes no 2 0.012768 56.434 By MS/MS By matching 1 1 2063300 1137100 926190 1159 425 1245 2705;2706 2287 2287 64 1 GVSSPTSRYR SSPRPRERGVSSPTSR SSPTSRYRPPLSP___ R G V Y R P 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 3 1 0 1 1 0 0 10 1 1108.5625 K7EMI3;K7EJN8 K7EMI3 63 72 PRR22 yes no 2 4.2958E-06 86.463 By MS/MS 1 0 0 0 1160 1037 1246 2707 2288 2288 1377;3575;4215 1 GVVDSEDLPLNISR PEYLNFIRGVVDSEDL DLPLNISREMLQQSKI R G V S R E 0 1 1 2 0 0 1 1 0 1 2 0 0 0 1 2 0 0 0 2 0 0 14 0 1512.7784 P08238;P07900 P08238 379 392 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha no no 2 0.016063 55.401 By MS/MS By matching 1 1 2950900 1309800 1641000 1161 1237;1234 1247 2708;2709 2289 2289 1 GWGDQLIWTQTYEEALYK KLPQTLSRGWGDQLIW TYEEALYKSKTSNKPL R G W Y K S 1 0 0 1 0 2 2 2 0 1 2 1 0 0 0 0 2 2 2 0 0 0 18 0 2200.0477 C9J3E2;B5MC07;O95994 C9J3E2 47 64 AGR2 Anterior gradient protein 2 homolog yes no 2 1.0924E-69 153.75 By matching By MS/MS 1 1 20757000 11555000 9201800 1162 391 1248 2710;2711 2290 2290 1 GYAFIEFASFEDAK QNQNGKSKGYAFIEFA FASFEDAKEALNSCNK K G Y A K E 3 0 0 1 0 0 2 1 0 1 0 1 0 3 0 1 0 0 1 0 0 0 14 0 1593.7351 P19338;H7BY16 P19338 524 537 NCL Nucleolin yes no 2 6.1149E-09 110.86 By MS/MS By MS/MS 1 1 4640200 1909700 2730500 1163 1294 1249 2712;2713 2291;2292 2292 2 GYHGMQRNVGSSQFK LLMAYSGKGYHGMQRN NVGSSQFKTIEDDLVS K G Y F K T 0 1 1 0 0 2 0 3 1 0 0 1 1 1 0 2 0 0 1 1 0 0 15 1 1694.7947 F5H168;Q9Y606;F5GY32;F8W9U5;F5H1B2;F5GXL3;G8JLB3 F5H168 68 82 PUS1 tRNA pseudouridine synthase A, mitochondrial;tRNA pseudouridine synthase yes no 2 0.007604 49.5 By matching By MS/MS 1 1 4667400 2208400 2459000 1164 710 1250 2714;2715 2293 2293 107;383;384 1 GYMMMFPR RSPFEDSRGYMMMFPR GYMMMFPRVSPPPAPS R G Y P R V 0 1 0 0 0 0 0 1 0 0 0 0 3 1 1 0 0 0 1 0 0 0 8 0 1031.4391 O14654 O14654 742 749 IRS4 Insulin receptor substrate 4 yes yes 2 0.0033644 103.29 By MS/MS By MS/MS 2 3 1894200 603320 1290900 1165 1094 1251 2716;2717;2718;2719;2720 2294;2295;2296;2297;2298 2296 130;131;132 4230 5 GYNDDYYEESYFTTR DALLYQSKGYNDDYYE EESYFTTRTYGEPESA K G Y T R T 0 1 1 2 0 0 2 1 0 0 0 0 0 1 0 1 2 0 4 0 0 0 15 0 1921.7643 P50402;Q5HY57 P50402 89 103 EMD Emerin yes no 2 0.0086819 51.013 By MS/MS By MS/MS 2 1 4773400 3637900 1135600 1166 1389 1252 2721;2722;2723 2299;2300 2299 4317;4318 2 GYSDEIYVVPDDSQNR IDTIFKQKGYSDEIYV VPDDSQNRIKIRNSFV K G Y N R I 0 1 1 3 0 1 1 1 0 1 0 0 0 0 1 2 0 0 2 2 0 0 16 0 1855.8224 A0A0A0MSK6;Q13017 A0A0A0MSK6 1103 1118 ARHGAP5 Rho GTPase-activating protein 5 yes no 2 0.00040396 83.226 By MS/MS By MS/MS 1 1 19325000 9952300 9373100 1167 165 1253 2724;2725 2301;2302 2301 4028 2 GYSFTTTAER LMKILTERGYSFTTTA SFTTTAEREIVRDIKE R G Y E R E 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 1 3 0 1 0 0 0 10 0 1131.5197 P63261;P60709;I3L3I0;I3L1U9;I3L4N8 P63261 197 206 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2 0.0088022 73.985 By matching By MS/MS 1 1 5651400 2692200 2959100 1168 1422 1254 2726;2727 2303 2303 1 GYTSDSEVYTDHGRPGK QNDVSLDRGYTSDSEV TDHGRPGKIHRSATDA R G Y G K I 0 1 0 2 0 0 1 3 1 0 0 1 0 0 1 2 2 0 2 1 0 0 17 1 1867.8337 Q92538 Q92538 1315 1331 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 3 0.0016232 65.467 By MS/MS By MS/MS 1 1 46572000 19274000 27298000 1169 1848 1255 2728;2729 2304;2305 2305 2606 2 GYVLGETSNLPSPGK LVIPFSGKGYVLGETS SNLPSPGKLITSHAIN K G Y G K L 0 0 1 0 0 0 1 3 0 0 2 1 0 0 2 2 1 0 1 1 0 0 15 0 1517.7726 B1AKT1;Q9H040 B1AKT1 153 167 SPRTN SprT-like domain-containing protein Spartan yes no 2 0.01857 50.786 By matching By MS/MS 1 1 1178200 554750 623450 1170 358 1256 2730;2731 2306 2306 525 1 GYYSPGIVSTR HTNYLLMRGYYSPGIV SPGIVSTRNLNPNDSI R G Y T R N 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 2 1 0 2 1 0 0 11 0 1198.5982 Q12789 Q12789 1650 1660 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.0082092 57.55 By MS/MS By matching 1 1 3145400 1227300 1918100 1171 1477 1257 2732;2733 2307 2307 4336;4337 1 HALIIYDDLSK EYFRDNGKHALIIYDD IIYDDLSKQAVAYRQM K H A S K Q 1 0 0 2 0 0 0 0 1 2 2 1 0 0 0 1 0 0 1 0 0 0 11 0 1286.6871 P25705 P25705 306 316 ATP5A1 ATP synthase subunit alpha, mitochondrial yes yes 2 0.0082923 68.846 By MS/MS 1 369970 0 369970 1172 1312 1258 2734 2308 2308 1 HALTSPSLGGQGR GIGGVSPRHALTSPSL PSLGGQGRQNLWFANP R H A G R Q 1 1 0 0 0 1 0 3 1 0 2 0 0 0 1 2 1 0 0 0 0 0 13 0 1279.6633 M0QZ22;Q5PRF9;M0QX45 M0QZ22 603 615 SAMD4B Protein Smaug homolog 2 yes no 2 0.00062948 77.894 By MS/MS By MS/MS 1 1 6307000 3229500 3077600 1173 1066 1259 2735;2736 2309;2310 2309 1402;3587 2 HAPHCLSEEEGEQDRPR PRPASLLRHAPHCLSE EGEQDRPRAPGPWDPL R H A P R A 1 2 0 1 1 1 4 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 17 1 2045.8973 E9PH18;A0A0J9YX62;O75190 E9PH18 156 172 DNAJB6 DnaJ homolog subfamily B member 6 yes no 3 0.021179 43.534 By matching By MS/MS 1 1 8237200 3875700 4361500 1174 254 1260 2737;2738 2311 2311 368 1 HAPSPEPAVQGTGVAGVPEESGDAAAIPAK SPSPARKRHAPSPEPA DAAAIPAKKAPAGQEE R H A A K K 7 0 0 1 0 1 3 4 1 1 0 1 0 0 5 2 1 0 0 3 0 0 30 0 2809.3883 P13051 P13051 20 49 UNG Uracil-DNA glycosylase yes yes 3 4.0123E-08 66.447 By matching By MS/MS 1 1 22246000 12955000 9290800 1175 1267 1261 2739;2740 2312 2312 1671 1 HASAPSHVQPSDSEK QKSQPRRRHASAPSHV VQPSDSEKNRTMLFQV R H A E K N 2 0 0 1 0 1 1 0 2 0 0 1 0 0 2 4 0 0 0 1 0 0 15 0 1575.7277 O60343 O60343 339 353 TBC1D4 TBC1 domain family member 4 yes yes 2;3 6.5227E-14 117.13 By MS/MS By MS/MS 2 2 26386000 14465000 11921000 1176 1138 1262 2741;2742;2743;2744 2313;2314;2315 2314 1515;1516 3 HASAPSHVQPSDSEKNR QKSQPRRRHASAPSHV PSDSEKNRTMLFQVGR R H A N R T 2 1 1 1 0 1 1 0 2 0 0 1 0 0 2 4 0 0 0 1 0 0 17 1 1845.8718 O60343 O60343 339 355 TBC1D4 TBC1 domain family member 4 yes yes 3;4 5.7193E-22 121.92 By MS/MS By MS/MS 2 2 29688000 15703000 13985000 1177 1138 1263 2745;2746;2747;2748 2316;2317;2318;2319 2319 1515;1516 4 HASPILPITEFSDIPR NRVTGNFKHASPILPI TEFSDIPRRAPKKPLT K H A P R R 1 1 0 1 0 0 1 0 1 3 1 0 0 1 3 2 1 0 0 0 0 0 16 0 1791.9519 G5E972;P42167;H0YJH7 G5E972 264 279 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2;3 0.0013098 67.326 By matching By MS/MS 1 2 3680800 865050 2815800 1178 808 1264 2749;2750;2751 2320;2321;2322;2323 2320 1076 4 HAYKDDSPR KERRPHKKHAYKDDSP AYKDDSPRRRSTSPDH K H A P R R 1 1 0 2 0 0 0 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 9 1 1087.5047 Q02040 Q02040 627 635 AKAP17A A-kinase anchor protein 17A yes yes 2;3 0.00093291 111.94 By MS/MS By MS/MS 2 2 7084700 3168300 3916400 1179 1454 1265 2752;2753;2754;2755 2324;2325;2326 2324 1939 3 HDGAFLIR EEMLSKQRHDGAFLIR HDGAFLIRESESAPGD R H D I R E 1 1 0 1 0 0 0 1 1 1 1 0 0 1 0 0 0 0 0 0 0 0 8 0 927.49265 P62993;J3KT38;J3QRL5 P62993 79 86 GRB2 Growth factor receptor-bound protein 2 yes no 2 0.017764 81.784 By MS/MS By matching 1 1 4070900 2388200 1682700 1180 1436 1266 2756;2757 2327 2327 1 HDSPEDVKR CMMAQYNRHDSPEDVK DSPEDVKRRAMADPEV R H D K R R 0 1 0 2 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 9 1 1081.5152 H0YGI8;P31948 H0YGI8 78 86 STIP1 Stress-induced-phosphoprotein 1 yes no 3 0.0034617 72.34 By matching By MS/MS 1 1 4088600 1666000 2422600 1181 885 1267 2758;2759 2328 2328 1194 1 HDTPDPSPLR DPSPRRARHDTPDPSP TPDPSPLRGARHDSDT R H D L R G 0 1 0 2 0 0 0 0 1 0 1 0 0 0 3 1 1 0 0 0 0 0 10 0 1133.5465 Q9BRD0 Q9BRD0 157 166 BUD13 BUD13 homolog yes yes 2 0.00064939 79.659 By MS/MS By MS/MS 2 1 5542600 2735500 2807000 1182 1955 1268;1269 2760;2761;2762 2329;2330;2331 2329 2768;3912 2 HELQANCYEEVKDR KKKLTGIKHELQANCY CYEEVKDRCTLAEKLG K H E D R C 1 1 1 1 1 1 3 0 1 0 1 1 0 0 0 0 0 0 1 1 0 0 14 1 1789.8053 E9PP50;P23528;G3V1A4;E9PK25 E9PP50 133 146 CFL1 Cofilin-1 yes no 3 0.00011058 84.62 By matching By MS/MS 1 1 1888800 654030 1234800 1183 675 1270 2763;2764 2332 2332 1 HELSPPQKR RERFSPPRHELSPPQK ELSPPQKRMRRDWDEH R H E K R M 0 1 0 0 0 1 1 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1090.5883 Q9BXP5;C9JUL9 Q9BXP5 71 79 SRRT Serrate RNA effector molecule homolog yes no 2;3 0.0045153 91.549 By MS/MS By MS/MS 1 2 10097000 2349600 7747200 1184 1975 1271 2765;2766;2767 2333;2334;2335;2336 2334 2807 4 HFKDEDEDEDVASPDGLGR ARRNGQEKHFKDEDED ASPDGLGRLNVAGAGG K H F G R L 1 1 0 5 0 0 3 2 1 0 1 1 0 1 1 1 0 0 0 1 0 0 19 1 2129.9138 O95365 O95365 537 555 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 3 0.013833 46.368 By MS/MS By matching 1 1 3122800 1587000 1535800 1185 1190 1272 2768;2769 2337 2337 1589 1 HGESAWNLENR AYKLVLIRHGESAWNL SAWNLENRFSGWYDAD R H G N R F 1 1 2 0 0 0 2 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 11 0 1311.5956 P18669 P18669 11 21 PGAM1 Phosphoglycerate mutase 1 yes yes 2 3.6892E-43 161.87 By MS/MS By MS/MS 1 1 20776000 9618500 11157000 1186 1290 1273 2770;2771 2338;2339 2338 1699 2 HGGPGPGGPEPELSPITEGSEAR IISRLFHRHGGPGPGG ITEGSEARAGPPAPAP R H G A R A 1 1 0 0 0 0 4 6 1 1 1 0 0 0 5 2 1 0 0 0 0 0 23 0 2227.0505 Q8WUF5 Q8WUF5 554 576 PPP1R13L RelA-associated inhibitor yes yes 3 0.012308 44.054 By MS/MS By matching 1 1 1873900 849860 1024000 1187 1833 1274 2772;2773 2340 2340 2582 1 HGGVCAPAAVATSPPGAIPK HGAEEECRHGGVCAPA SPPGAIPKEACGGAPL R H G P K E 5 0 0 0 1 0 0 3 1 1 0 1 0 0 4 1 1 0 0 2 0 0 20 0 1856.9567 Q9Y6A5 Q9Y6A5 238 257 TACC3 Transforming acidic coiled-coil-containing protein 3 yes yes 3 0.0071922 60.307 By MS/MS By matching 1 1 1318600 889350 429260 1188 2175 1275 2774;2775 2341 2341 3984 1 HGLAHDEMKSPR ISPSTFRKHGLAHDEM HDEMKSPREPGYKAEG K H G P R E 1 1 0 1 0 0 1 1 2 0 1 1 1 0 1 1 0 0 0 0 0 0 12 1 1376.6619 Q9Y2W1 Q9Y2W1 689 700 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3;4 0.00075981 91.789 By MS/MS By MS/MS 3 3 17695000 8668600 9026900 1189 2146 1276;1277 2776;2777;2778;2779;2780;2781 2342;2343;2344;2345;2346 2346 312 3118 5 HGLLLPASPVR NSTTFPSRHGLLLPAS LLPASPVRMHSSRLHQ R H G V R M 1 1 0 0 0 0 0 1 1 0 3 0 0 0 2 1 0 0 0 1 0 0 11 0 1158.6873 Q96E09 Q96E09 69 79 FAM122A Protein FAM122A yes yes 2 0.0018447 94.402 By MS/MS By MS/MS 1 1 15063000 6854600 8208500 1190 1885 1278 2782;2783 2347;2348 2347 2658 2 HGLQLGAQSPGR LEKHVQVRHGLQLGAQ LGAQSPGRGTTLARGS R H G G R G 1 1 0 0 0 2 0 3 1 0 2 0 0 0 1 1 0 0 0 0 0 0 12 0 1219.6422 Q8N1G0;A6PVV7 Q8N1G0 1049 1060 ZNF687 Zinc finger protein 687 yes no 2;3 0.00010754 89.136 By MS/MS By MS/MS 2 2 17899000 8141100 9757500 1191 1771 1279 2784;2785;2786;2787 2349;2350;2351;2352 2350 2490 3 HGSFHEDEDPIGSPR TGGSPSVRHGSFHEDE EDPIGSPRLLSVKGSP R H G P R L 0 1 0 2 0 0 2 2 2 1 0 0 0 1 2 2 0 0 0 0 0 0 15 0 1678.7336 Q96T58 Q96T58 1266 1280 SPEN Msx2-interacting protein yes yes 3 1.0532E-14 119.62 By MS/MS By MS/MS 1 1 6504200 3681500 2822600 1192 1934 1280 2788;2789 2353;2354 2353 2739 2 HGSGPNIILTGDSSPGFSK QNLTHCSRHGSGPNII DSSPGFSKEIAAALAG R H G S K E 0 0 1 1 0 0 0 4 1 2 1 1 0 1 2 4 1 0 0 0 0 0 19 0 1869.9221 Q5T4K5;Q53ET0 Q5T4K5 291 309 CRTC2 CREB-regulated transcription coactivator 2 yes no 3 0.0035677 56.424 By MS/MS By MS/MS 1 1 3026200 1259100 1767200 1193 1594 1281 2790;2791 2355;2356 2356 2212;2213 2 HGSVSADEAAR ________________ VSADEAARTAPFHLDL R H G A R T 3 1 0 1 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1098.5054 A0A1B0GU90;A0A1B0GW73;H3BNF1;A0A1B0GTV3;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;Q9NWW5 A0A1B0GU90 5 15 CLN6 Ceroid-lipofuscinosis neuronal protein 6 yes no 2 0.0015225 96.82 By matching By MS/MS 1 1 7166400 3570300 3596100 1194 259 1282 2792;2793 2357 2357 373 1 HHPEHFSGR TITGYRIRHHPEHFSG HPEHFSGRPREDRVPH R H H G R P 0 1 0 0 0 0 1 1 3 0 0 0 0 1 1 1 0 0 0 0 0 0 9 0 1102.5057 P02751;H0Y7Z1 P02751 1392 1400 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 0.0019686 91.087 By MS/MS By matching 1 1 421680 262300 159380 1195 1212 1283 2794;2795 2358 2358 1 HHQEEDAGPTQPSPAKPQLK HKKKHKKKHHQEEDAG SPAKPQLKLKIKLGGQ K H H L K L 2 0 0 1 0 3 2 1 2 0 1 2 0 0 4 1 1 0 0 0 0 0 20 1 2194.0767 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70;H7C171;C9JKY0 Q9C086 51 70 INO80B;INO80B-WBP1 INO80 complex subunit B yes no 3 0.015812 45.094 By matching By MS/MS 1 1 1753200 986260 766930 1196 1983 1284 2796;2797 2359 2359 2821 1 HIDRNYEPLK AFKPTSNRHIDRNYEP DRNYEPLKTQPKKYAK R H I L K T 0 1 1 1 0 0 1 0 1 1 1 1 0 0 1 0 0 0 1 0 0 0 10 1 1283.6622 Q12929 Q12929 520 529 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 3 0.0064166 66.299 By MS/MS By MS/MS 1 1 1777700 1066600 711060 1197 1484 1285 2798;2799 2360;2361 2360 4341 2 HIISATSLSTSPTELGSR SWREGGGRHIISATSL SPTELGSRNSSTGDGA R H I S R N 1 1 0 0 0 0 1 1 1 2 2 0 0 0 1 5 3 0 0 0 0 0 18 0 1855.964 Q5JSZ5 Q5JSZ5 216 233 PRRC2B Protein PRRC2B yes yes 2;3 1.4093E-05 98.507 By MS/MS By MS/MS 2 2 12409000 5338800 7070200 1198 1607 1286 2800;2801;2802;2803 2362;2363;2364 2363 2232;2233;3786 3 HIKEEPLSEEEPCTSTAIASPEK KKKRGKKKHIKEEPLS TAIASPEKKKKKKKKR K H I E K K 2 0 0 0 1 0 6 0 1 2 1 2 0 0 3 3 2 0 0 0 0 0 23 1 2581.2218 Q9Y2X3 Q9Y2X3 495 517 NOP58 Nucleolar protein 58 yes yes 3 0.0047505 52.721 By MS/MS By matching 1 1 22353000 11563000 10791000 1199 2148 1287 2804;2805 2365 2365 3122;3123;3975 1 HIKEEPLSEEEPCTSTAIASPEKK KKKRGKKKHIKEEPLS AIASPEKKKKKKKKRE K H I K K K 2 0 0 0 1 0 6 0 1 2 1 3 0 0 3 3 2 0 0 0 0 0 24 2 2709.3167 Q9Y2X3 Q9Y2X3 495 518 NOP58 Nucleolar protein 58 yes yes 3;4 0.00014489 75.611 By MS/MS By MS/MS 2 3 159150000 79804000 79343000 1200 2148 1288;1289 2806;2807;2808;2809;2810 2366;2367;2368 2366 3122;3123;3975 3 HIVSNDSSDSDDESHEPK ELENITTKHIVSNDSS DDESHEPKGTENEDAG K H I P K G 0 0 1 4 0 0 2 0 2 1 0 1 0 0 1 5 0 0 0 1 0 0 18 0 1996.8246 P47712 P47712 428 445 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 3 0.0033649 55.844 By matching By MS/MS 1 1 7774800 3017000 4757700 1201 1371 1290 2811;2812 2369 2369 1818 1 HKAAAYDISEDEED CSPANLSRHKAAAYDI DISEDEED________ R H K E D - 3 0 0 3 0 0 3 0 1 1 0 1 0 0 0 1 0 0 1 0 0 0 14 1 1591.6638 P49585 P49585 354 367 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 2 0.0007849 78.505 By matching By MS/MS 1 1 19651000 10091000 9559800 1202 1380 1291 2813;2814 2370 2370 1842 1 HKSYLEQVSLRQLEK EQLKNNPRHKSYLEQV VSLRQLEKLFSFLRGY R H K E K L 0 1 0 0 0 2 2 0 1 0 3 2 0 0 0 2 0 0 1 1 0 0 15 2 1857.0108 A8MX07;Q96LK0 A8MX07 23 37 CEP19 Centrosomal protein of 19 kDa yes no 3 0.015673 40.025 By MS/MS 1 431040 0 431040 1203 341 1292 2815 2371 2371 485;4074 1 HLDGEEDGSSDQSQASGTTGGR AKKARKVKHLDGEEDG ASGTTGGRRVSKARRR K H L G R R 1 1 0 3 0 2 2 5 1 0 1 0 0 0 0 4 2 0 0 0 0 0 22 0 2189.9057 Q5H907;Q5H909;Q9UNF1 Q5H907 144 165 MAGED2 Melanoma-associated antigen D2 yes no 3 0.0060232 50.14 By MS/MS By matching 1 1 1839400 776920 1062500 1204 1603 1293 2816;2817 2372 2372 2222 1 HLEAADKGHSPAQKPK GTEFNKQKHLEAADKG HSPAQKPKTSSGTKPS K H L P K T 3 0 0 1 0 1 1 1 2 0 1 3 0 0 2 1 0 0 0 0 0 0 16 2 1712.8958 Q14966;A0A096LPH6;A0A096LPI0;A0A096LPB4 Q14966 596 611 ZNF638 Zinc finger protein 638 yes no 4 0.0024421 67.644 By MS/MS By MS/MS 1 1 23480000 9632300 13848000 1205 1531 1294 2818;2819 2373;2374 2374 2110 2 HLHFVDVDDLHIIVQELR AASAPAEKHLHFVDVD HIIVQELRGSILDAMR K H L L R G 0 1 0 3 0 1 1 0 3 2 3 0 0 1 0 0 0 0 0 3 0 0 18 0 2197.1644 Q6PCB0 Q6PCB0 189 206 VWA1 von Willebrand factor A domain-containing protein 1 yes yes 3;4 1.8459E-06 97.767 By MS/MS By MS/MS 2 1 4111300 2924500 1186700 1206 1681 1295 2820;2821;2822 2375;2376;2377 2375 2 HNGLMTSVTRRPAATR LIEDQLLRHNGLMTSV TRRPAATRQGHSTAVT R H N T R Q 2 3 1 0 0 0 0 1 1 0 1 0 1 0 1 1 3 0 0 1 0 0 16 2 1766.9322 F2Z3N3;Q68BL8 F2Z3N3 339 354 OLFML2B Olfactomedin-like protein 2B yes no 2 0.022261 41.283 By MS/MS 1 0 0 0 1207 696 1296 2823 2378 2378 933;3463;3464;3465 1 HNGTGDKSIYGEK CQGGDFTRHNGTGDKS DKSIYGEKFDDENLIR R H N E K F 0 0 1 1 0 0 1 3 1 1 0 2 0 0 0 1 1 0 1 0 0 0 13 1 1404.6634 Q9Y536 Q9Y536 70 82 PPIAL4A Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C yes yes 3 0.0078692 61.435 By MS/MS 1 0 0 0 1208 2164 1297 2824 2379 2379 1 HNQIITEETGSAVEPRYQRVQR INFMDFPKHNQIITEE PRYQRVQRPLYVVING K H N Q R P 1 3 1 0 0 3 3 1 1 2 0 0 0 0 1 1 2 0 1 2 0 0 22 2 2610.3263 A0A0A0MRX3 A0A0A0MRX3 321 342 DENND4C yes yes 3 0.005408 46.131 By MS/MS 1 0 0 0 1209 153 1298 2825 2380 2380 24;345;346;347 3265 1 HNSWSSSSR QSKSFRRRHNSWSSSS NSWSSSSRHPNQATPK R H N S R H 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 5 0 1 0 0 0 0 9 0 1046.453 H3BQ37;H3BPW9;Q96F86 H3BQ37 159 167 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2 0.0093989 76.165 By MS/MS By MS/MS 1 2 8686200 2651300 6034900 1210 916 1299 2826;2827;2828 2381;2382 2382 1227 2 HPDIYAVPIK ARIEIAQKHPDIYAVP DIYAVPIKTHKPDPGT K H P I K T 1 0 0 1 0 0 0 0 1 2 0 1 0 0 2 0 0 0 1 1 0 0 10 0 1151.6339 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1173 1182 TJP2 Tight junction protein ZO-2 yes no 2 0.0034763 68.735 By MS/MS By MS/MS 1 2 5702800 1678800 4023900 1211 290 1300 2829;2830;2831 2383;2384;2385 2384 4056 3 HPDYSVVLLLR FLYEYARRHPDYSVVL YSVVLLLRLAKTYETT R H P L R L 0 1 0 1 0 0 0 0 1 0 3 0 0 0 1 1 0 0 1 2 0 0 11 0 1310.7347 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 362 372 ALB Serum albumin yes no 3 0.0043999 63.624 By MS/MS By MS/MS 1 1 355430 0 355430 + 1212 209 1301 2832;2833 2386;2387 2386 2 HPGGGDYEEL GGGAPGGRHPGGGDYE GGGDYEEL________ R H P E L - 0 0 0 1 0 0 2 3 1 0 1 0 0 0 1 0 0 0 1 0 0 0 10 0 1072.4462 H0Y4Z8;Q3YEC7 H0Y4Z8 721 730 RABL6 Rab-like protein 6 yes no 2 0.0027307 79.116 By MS/MS By MS/MS 1 1 6629700 3120100 3509600 1213 828 1302 2834;2835 2388;2389;2390;2391 2389 4175 4 HPLLSSGGPQSPLR SSPVFTFRHPLLSSGG GGPQSPLRGSTGSLKS R H P L R G 0 1 0 0 0 1 0 2 1 0 3 0 0 0 3 3 0 0 0 0 0 0 14 0 1444.7787 Q9P1Y5 Q9P1Y5 358 371 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.0056663 62.357 By MS/MS By matching 1 1 2311400 786010 1525400 1214 2085 1303 2836;2837 2392 2392 2992 1 HPSSPSALR TAAARSARHPSSPSAL PSSPSALRSPADPIDL R H P L R S 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 3 0 0 0 0 0 0 9 0 950.49338 H0YAZ3;H0YB51;O60504 H0YAZ3 54 62 SORBS3 Vinexin yes no 2 0.010911 72.096 By MS/MS By matching 1 1 1909400 914360 995040 1215 864 1304 2838;2839 2393 2393 1161 1 HPYFYAPELLFFAK YLYEIARRHPYFYAPE PELLFFAKRYKAAFTE R H P A K R 2 0 0 0 0 0 1 0 1 0 2 1 0 3 2 0 0 0 2 0 0 0 14 0 1741.8868 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;H7C013 A0A0C4DGB6 170 183 ALB Serum albumin yes no 2;3 0.00046645 96.82 By MS/MS By MS/MS 1 2 8390100 4105200 4284900 + 1216 209 1305 2840;2841;2842 2394;2395 2394 2 HQQQLLASPGSSTVDNK RLHGQLQRHQQQLLAS GSSTVDNKMLDDLYED R H Q N K M 1 0 1 1 0 3 0 1 1 0 2 1 0 0 1 3 1 0 0 1 0 0 17 0 1808.9017 F2Z2X4;Q9C0E2 F2Z2X4 514 530 XPO4 Exportin-4 yes no 3 0.016614 44.848 By MS/MS 1 3406000 0 3406000 1217 692 1306 2843 2396 2396 930 1 HQTLEVSLSRDSPLK LRVQGKEKHQTLEVSL LSRDSPLKTLMSHYEE K H Q L K T 0 1 0 1 0 1 1 0 1 0 3 1 0 0 1 3 1 0 0 1 0 0 15 1 1708.9108 Q8NCF5;H3BSZ7 Q8NCF5 358 372 NFATC2IP NFATC2-interacting protein yes no 3 0.00080379 71.529 By matching By MS/MS 1 1 5762900 3231600 2531300 1218 1792 1307 2844;2845 2397 2397 2516 1 HRPSEADEEELAR EEEQRRPKHRPSEADE ADEEELARRREARKQE K H R A R R 2 2 0 1 0 0 4 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 13 1 1537.7121 O14617 O14617 655 667 AP3D1 AP-3 complex subunit delta-1 yes yes 3 0.00019791 97.129 By MS/MS By MS/MS 1 1 7431700 3394300 4037500 1219 1093 1308 2846;2847 2398;2399 2399 1448 2 HRPSPPATPPPK SASPPRRRHRPSPPAT PPATPPPKTRHSPTPQ R H R P K T 1 1 0 0 0 0 0 0 1 0 0 1 0 0 6 1 1 0 0 0 0 0 12 1 1280.699 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 394 405 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.0035573 94.61 By MS/MS By MS/MS 3 2 27905000 15481000 12424000 1220 346 1309 2848;2849;2850;2851;2852 2400;2401;2402;2403;2404;2405;2406;2407;2408;2409;2410;2411;2412 2405 490;3326 13 HSEKSPPSTENKHEAK SRKLLNAKHSEKSPPS TENKHEAKRRRTERVR K H S A K R 1 0 1 0 0 0 3 0 2 0 0 3 0 0 2 3 1 0 0 0 0 0 16 2 1804.8704 H3BQL3;Q6PH81 H3BQL3 51 66 C16orf87 UPF0547 protein C16orf87 yes no 4 0.003443 62.237 By matching By MS/MS 1 1 2267900 1119100 1148800 1221 920 1310 2853;2854 2413 2413 1231 1 HSHSPASSPKPLKK RSPEASPKHSHSPASS SSPKPLKKQNPSSGAR K H S K K Q 1 0 0 0 0 0 0 0 2 0 1 3 0 0 3 4 0 0 0 0 0 0 14 2 1499.8209 Q9HDC5 Q9HDC5 472 485 JPH1 Junctophilin-1 yes yes 4 0.015333 41.401 By MS/MS By matching 1 1 2609500 913710 1695800 1222 2035 1311 2855;2856 2414 2414 2908;2909;2910 1 HSLLLSSSPNR NSTTIMSRHSLLLSSS LLSSSPNRIPSSRLHQ R H S N R I 0 1 1 0 0 0 0 0 1 0 3 0 0 0 1 4 0 0 0 0 0 0 11 0 1209.6466 G1UD79 G1UD79 57 67 SPACIA2 yes yes 2 0.0019138 87.216 By MS/MS 1 994230 0 994230 1223 776 1312 2857 2415 2415 1036 1 HSRSPFEDSR NVSASKKRHSRSPFED RSPFEDSRGYMMMFPR R H S S R G 0 2 0 1 0 0 1 0 1 0 0 0 0 1 1 3 0 0 0 0 0 0 10 1 1216.5585 O14654 O14654 732 741 IRS4 Insulin receptor substrate 4 yes yes 3 0.0056227 65.234 By MS/MS By MS/MS 1 2 2165700 1216200 949480 1224 1094 1313 2858;2859;2860 2416;2417 2416 1454;1455 2 HSSYPAGTEDDEGMGEEPSPFR GAVEIRSRHSSYPAGT GEEPSPFRGRSRSAPP R H S F R G 1 1 0 2 0 0 4 3 1 0 0 0 1 1 3 3 1 0 1 0 0 0 22 0 2393.9706 Q92934 Q92934 73 94 BAD Bcl2-associated agonist of cell death yes yes 3 0.0086313 43.241 By MS/MS By matching 1 1 2480000 1219900 1260100 1225 1869 1314 2861;2862 2418 2418 269 2639 1 HTDDEMTGYVATR ILDFGLARHTDDEMTG MTGYVATRWYRAPEIM R H T T R W 1 1 0 2 0 0 1 1 1 0 0 0 1 0 0 0 3 0 1 1 0 0 13 0 1494.6409 E7EX54;B4E0K5;Q16539 E7EX54 97 109 MAPK14 Mitogen-activated protein kinase 14 yes no 2;3 4.763E-30 150.09 By MS/MS By MS/MS 4 4 62066000 27339000 34727000 1226 388 1315;1316 2863;2864;2865;2866;2867;2868;2869;2870 2419;2420;2421;2422;2423;2424 2423 52 4095 6 HTFSGVASVESSSGEAFHVGK HRAHYDLRHTFSGVAS GEAFHVGKTPIVGQPS R H T G K T 2 0 0 0 0 0 2 3 2 0 0 1 0 2 0 5 1 0 0 3 0 0 21 0 2118.997 CON__P12763 CON__P12763 313 333 yes yes 3 0.0010726 67.478 By MS/MS By MS/MS 2 3 10126000 3240400 6885500 + 1227 505 1317;1318 2871;2872;2873;2874;2875 2425;2426;2427;2428 2426 691;692;693 4 HTGPNSPDTANDGFVR VEMDWVLKHTGPNSPD TANDGFVRLRGLPFGC K H T V R L 1 1 2 2 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 16 0 1683.7601 E9PCY7;G8JLB6;P55795;P31943;E5RGH4;E7EQJ0;D6RAM1;H0YAQ2;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RIU0;D6RDU3;D6RJ04;D6RIH9;D6RBM0 E9PCY7 99 114 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 2;3 0.0010436 69.986 By MS/MS By MS/MS 1 2 92160000 43401000 48759000 1228 613 1319 2876;2877;2878 2429;2430;2431 2429 842 3 HVDSLSQRSPK KNSEPSARHVDSLSQR SLSQRSPKASLRRVEL R H V P K A 0 1 0 1 0 1 0 0 1 0 1 1 0 0 1 3 0 0 0 1 0 0 11 1 1252.6524 K7ENL0;Q9UHD8;K7EJV0;K7EPY1 K7ENL0 62 72 SEPT9 Septin-9 yes no 2 0.0097549 77.597 By MS/MS By MS/MS 1 1 3217700 1816500 1401200 1229 1049 1320 2879;2880 2432;2433 2433 1384;1385 1 HVFGESDELIGQK VLGHSERRHVFGESDE SDELIGQKVAHALAEG R H V Q K V 0 0 0 1 0 1 2 2 1 1 1 1 0 1 0 1 0 0 0 1 0 0 13 0 1457.7151 P60174;U3KQF3;U3KPZ0;U3KPS5 P60174 138 150 TPI1 Triosephosphate isomerase yes no 3 1.4321E-06 73.951 By MS/MS By MS/MS 1 1 0 0 0 1230 1420 1321 2881;2882 2434;2435 2435 2 HVIILMTDGLHNMGGDPITVIDEIR PEGWNRTRHVIILMTD ITVIDEIRDLLYIGKD R H V I R D 0 1 1 3 0 0 1 3 2 5 2 0 2 0 1 0 2 0 0 2 0 0 25 0 2758.4146 A0A0G2JH38;E7ETN3;B4E1Z4;P00751 A0A0G2JH38 382 406 CFB Complement factor B;Complement factor B Ba fragment;Complement factor B Bb fragment yes no 3;4 0.0011856 54.582 By MS/MS 2 5682700 0 5682700 1231 241 1322 2883;2884 2436;2437;2438 2438 3 HWVSKHSQDFETNDELKCK NRVLNVLRHWVSKHSQ TNDELKCKVIGFLEEV R H W C K V 0 0 1 2 1 1 2 0 2 0 1 3 0 1 0 2 1 1 0 1 0 0 19 2 2387.0964 Q13972 Q13972 960 978 RASGRF1 Ras-specific guanine nucleotide-releasing factor 1 yes yes 4 0.00046872 74.772 By matching By MS/MS 1 1 390140000 168440000 221700000 1232 1511 1323 2885;2886 2439 2439 209;415 1 HYEDGYPGGSDNYGSLSR YPPDGYSRHYEDGYPG DNYGSLSRVTRIEERY R H Y S R V 0 1 1 2 0 0 1 4 1 0 1 0 0 0 1 3 0 0 3 0 0 0 18 0 1972.8187 C9JZR2;O60716;E9PRE2 C9JZR2 216 233 CTNND1 Catenin delta-1 yes no 2;3 6.0421E-16 111.73 By MS/MS By MS/MS 2 2 66427000 29453000 36973000 1233 495 1324 2887;2888;2889;2890 2440;2441;2442 2440 4122 3 HYGITSPISLAAPK QQTQPPQKHYGITSPI PISLAAPKETDCVLTQ K H Y P K E 2 0 0 0 0 0 0 1 1 2 1 1 0 0 2 2 1 0 1 0 0 0 14 0 1453.7929 G3V457;G3V3I9;A0A0C4DGK1;G3XAH6;P51003 G3V457 19 32 PAPOLA Poly(A) polymerase alpha yes no 2 0.0079286 59.75 By matching By MS/MS 1 1 3615800 1560900 2054900 1234 213 1325 2891;2892 2443 2443 308 1 HYYIAAEEIIWNYAPSGIDIFTK NIRGKHVRHYYIAAEE SGIDIFTKENLTAPGS R H Y T K E 3 0 1 1 0 0 2 1 1 5 0 1 0 1 1 1 1 1 3 0 0 0 23 0 2713.3428 E9PFZ2;P00450;H7C5R1 E9PFZ2 373 395 CP Ceruloplasmin yes no 3 5.049E-54 131.86 By MS/MS By MS/MS 1 1 36747000 20606000 16141000 1235 628 1326 2893;2894 2444;2445 2445 2 HYYIGIIETTWDYASDHGEK TPAWAKEKHYYIGIIE YASDHGEKKLISVDTE K H Y E K K 1 0 0 2 0 0 2 2 2 3 0 1 0 0 0 1 2 1 3 0 0 0 20 0 2397.0913 E9PFZ2;P00450;D6RE86 E9PFZ2 23 42 CP Ceruloplasmin yes no 3;4 0.0023896 77.027 By MS/MS By matching 2 1 3219500 2932500 287030 1236 628 1327 2895;2896;2897 2446;2447 2446 2 IAAPELHKGDSDSEEDEPTK KKRKEPVKIAAPELHK SEEDEPTKKKTILQGS K I A T K K 2 0 0 3 0 0 4 1 1 1 1 2 0 0 2 2 1 0 0 0 0 0 20 1 2166.9917 Q92733 Q92733 147 166 PRCC Proline-rich protein PRCC yes yes 3 0.0091233 55.881 By MS/MS By matching 1 1 24533000 12960000 11572000 1237 1860 1328 2898;2899 2448 2448 2625;2626 1 IAASSSFR FPCTTAPKIAASSSFR IAASSSFRSSDKPIRT K I A F R S 2 1 0 0 0 0 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 8 0 837.43447 Q99961 Q99961 283 290 SH3GL1 Endophilin-A2 yes yes 2 2.8122E-08 140.83 By MS/MS By MS/MS 1 1 32973000 17121000 15853000 1238 1948 1329 2900;2901 2449;2450;2451;2452 2449 2759 4 IACDEEFSDSEDEGEGGRR SIRASDKRIACDEEFS DEGEGGRRNVADHKKG R I A R R N 1 2 0 3 1 0 5 3 0 1 0 0 0 1 0 2 0 0 0 0 0 0 19 1 2156.8553 Q92769 Q92769 415 433 HDAC2 Histone deacetylase 2 yes yes 3 0.0018836 61.127 By matching By MS/MS 1 1 12362000 6247700 6114400 1239 1861 1330 2902;2903 2453 2453 2629 1 IACEEEFSDSEEEGEGGRK SICSSDKRIACEEEFS EEGEGGRKNSSNFKKA R I A R K N 1 1 0 1 1 0 7 3 0 1 0 1 0 1 0 2 0 0 0 0 0 0 19 1 2156.8804 Q13547 Q13547 414 432 HDAC1 Histone deacetylase 1 yes yes 3 0.0021167 57.826 By matching By MS/MS 1 1 5085100 2553100 2532100 1240 1508 1331 2904;2905 2454 2454 2067 1 IACKSPPPESMDTPTSTR TTDDKTTKIACKSPPP MDTPTSTRRRPKTPLG K I A T R R 1 1 0 1 1 0 1 0 0 1 0 1 1 0 4 3 3 0 0 0 0 0 18 1 1973.9187 P46013 P46013 2101 2118 MKI67 Antigen KI-67 yes yes 3 6.7266E-06 95.073 By matching By MS/MS 1 1 5544800 2254100 3290700 1241 1361 1332 2906;2907 2455 2455 1785 1 IACKSPQPDPVDTPASTK TTDEKTTKIACKSPQP VDTPASTKQRPKRNLR K I A T K Q 2 0 0 2 1 1 0 0 0 1 0 2 0 0 4 2 2 0 0 1 0 0 18 1 1910.9408 P46013 P46013 2340 2357 MKI67 Antigen KI-67 yes yes 3 0.0019986 64.87 By MS/MS 1 3626900 3626900 0 1242 1361 1333 2908 2456 2456 1786 1 IADPEHDHTGFLTEYVATR ICDFGLARIADPEHDH LTEYVATRWYRAPEIM R I A T R W 2 1 0 2 0 0 2 1 2 1 1 0 0 1 1 0 3 0 1 1 0 0 19 0 2171.0283 B3KR49;E9PJF0;E9PQW4;P27361 B3KR49 76 94 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 3;4 0.00081077 83.253 By MS/MS By MS/MS 3 3 136580000 62305000 74279000 1243 367 1334;1335 2909;2910;2911;2912;2913;2914 2457;2458;2459;2460;2461;2462 2457 3337;4084 6 IAELRELQMDQQAKK SQDKSLRRIAELRELQ QMDQQAKKHLQEEFDA R I A K K H 2 1 0 1 0 3 2 0 0 1 2 2 1 0 0 0 0 0 0 0 0 0 15 2 1799.9564 E7EVX2 E7EVX2 195 209 GOLGA4 yes yes 3 0.0077016 48.608 By MS/MS 1 499680 499680 0 1244 598 1336 2915 2463 2463 375 1 IAISPLKSPNK STTQTPNKIAISPLKS SPLKSPNKAVKSTVQT K I A N K A 1 0 1 0 0 0 0 0 0 2 1 2 0 0 2 2 0 0 0 0 0 0 11 1 1166.7023 Q6MZP7 Q6MZP7 307 317 LIN54 Protein lin-54 homolog yes yes 2 0.0049479 86.911 By MS/MS By MS/MS 1 1 3515500 1593800 1921700 1245 1671 1337 2916;2917 2464;2465 2464 2338 2 IALVITDGR LPPSPNNRIALVITDG ALVITDGRSDTQRDTT R I A G R S 1 1 0 1 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 956.56548 A0A087X0S5;P12109 A0A087X0S5 721 729 COL6A1 Collagen alpha-1(VI) chain yes no 2 0.0015043 96.253 By MS/MS By matching 1 1 965520 608100 357410 1246 102 1338 2918;2919 2466 2466 1 IAQVSPGPR GRSASKLRIAQVSPGP AQVSPGPRDSPAFPDS R I A P R D 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 1 0 0 0 1 0 0 9 0 923.51886 Q9NQS7 Q9NQS7 259 267 INCENP Inner centromere protein yes yes 2 0.0025543 117.02 By MS/MS By MS/MS 1 1 20900000 11155000 9745500 1247 2041 1339 2920;2921 2467;2468 2467 2915 2 IASSIRKMSSSGGK GIIFSYSRIASSIRKM KMSSSGGKQKALSTCG R I A G K Q 1 1 0 0 0 0 0 2 0 2 0 2 1 0 0 5 0 0 0 0 0 0 14 2 1407.7504 Q96RA2 Q96RA2 221 234 OR7D2 Olfactory receptor 7D2 yes yes 3 0.020103 40.066 By MS/MS 1 540250 0 540250 1248 1924 1340 2922 2469 2469 276 0 IASYSKTPKIE YGRKSKDKIASYSKTP YSKTPKIE________ K I A I E - 1 0 0 0 0 0 1 0 0 2 0 2 0 0 1 2 1 0 1 0 0 0 11 2 1235.6762 J3QRX3 J3QRX3 34 44 ANKRD12 yes yes 2 0.021365 44.98 By matching By MS/MS 1 1 6477200 1055700 5421500 1249 1029 1341 2923;2924 2470 2470 4213 0 ICTEQSNSPPPIR HKFYKQNKICTEQSNS SNSPPPIRRQPTWSRS K I C I R R 0 1 1 0 1 1 1 0 0 2 0 0 0 0 3 2 1 0 0 0 0 0 13 0 1497.7246 Q15678 Q15678 307 319 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 0.00042969 82.749 By MS/MS 1 1679900 1679900 0 1250 1564 1342 2925 2471 2471 2159 1 IDASKNEEDEGHSNSSPR SAESEGAKIDASKNEE GHSNSSPRHSEAATAQ K I D P R H 1 1 2 2 0 0 3 1 1 1 0 1 0 0 1 4 0 0 0 0 0 0 18 1 1970.8566 D6RAF8;Q14103;D6RD83 D6RAF8 68 85 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2;3 1.7386E-15 111.11 By MS/MS By MS/MS 5 6 298690000 130280000 168410000 1251 524 1343;1344;1345 2926;2927;2928;2929;2930;2931;2932;2933;2934;2935;2936 2472;2473;2474;2475;2476;2477;2478;2479;2480;2481;2482;2483;2484 2480 78;79 708;709;710 13 IDEDGENTQIEDTEPMSPVLNSK MESLSSHRIDEDGENT MSPVLNSKFVPAENDS R I D S K F 0 0 2 3 0 1 4 1 0 2 1 1 1 0 2 2 2 0 0 1 0 0 23 0 2560.1487 Q12888;A6NNK5;C9JXV0 Q12888 536 558 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.0053388 50.705 By MS/MS By MS/MS 1 1 12950000 5942200 7007800 1252 1481 1346 2937;2938 2485;2486 2485 2004 2 IDEPLEGSEDR HESGASIKIDEPLEGS PLEGSEDRIITITGTQ K I D D R I 0 1 0 2 0 0 3 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 11 0 1258.5677 P61978;S4R359 P61978 423 433 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0044823 79.974 By matching By MS/MS 1 1 4268300 2147000 2121300 1253 1423 1347 2939;2940 2487 2487 1 IDFSSIAVPGTSSPR VQFPNLPRIDFSSIAV VPGTSSPRQRQPPGTQ R I D P R Q 1 1 0 1 0 0 0 1 0 2 0 0 0 1 2 4 1 0 0 1 0 0 15 0 1532.7835 Q5TDH0 Q5TDH0 94 108 DDI2 Protein DDI1 homolog 2 yes yes 2 0.012261 61.495 By matching By MS/MS 1 1 25014000 11013000 14001000 1254 1637 1348 2941;2942 2488 2488 2278;2279;3803 1 IDISPSTFR KSPEIHRRIDISPSTF DISPSTFRKHGLAHDE R I D F R K 0 1 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 9 0 1034.5397 Q9Y2W1 Q9Y2W1 679 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 5.4404E-07 139.15 By MS/MS By MS/MS 1 1 51799000 24410000 27389000 1255 2146 1349 2943;2944 2489;2490 2489 3119 2 IDISPSTLR KSPEIHRRIDISPSTL DISPSTLRKHTRLAGE R I D L R K 0 1 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 9 0 1000.5553 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 655 663 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0012852 100.82 By MS/MS By MS/MS 1 1 87282000 42080000 45202000 1256 2073 1350 2945;2946 2491;2492 2491 2970 2 IDISPSTLRK KSPEIHRRIDISPSTL ISPSTLRKHTRLAGEE R I D R K H 0 1 0 1 0 0 0 0 0 2 1 1 0 0 1 2 1 0 0 0 0 0 10 1 1128.6503 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 655 664 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 9.2169E-06 129.42 By MS/MS By MS/MS 2 2 15862000 8065500 7796800 1257 2073 1351 2947;2948;2949;2950 2493;2494;2495;2496 2496 2970 4 IDRNPRVK GLTPRRKKIDRNPRVK IDRNPRVKHREKFRRA K I D V K H 0 2 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 8 2 996.58286 Q9NQZ2 Q9NQZ2 428 435 UTP3 Something about silencing protein 10 yes yes 2 0.020701 56.011 By matching By MS/MS 1 1 839800 345940 493860 1258 2044 1352 2951;2952 2497 2497 298 0 IDSNISPK MKTSCKFKIDSNISPK IDSNISPKKDSKEFTQ K I D P K K 0 0 1 1 0 0 0 0 0 2 0 1 0 0 1 2 0 0 0 0 0 0 8 0 872.46035 Q9H501 Q9H501 148 155 ESF1 ESF1 homolog yes yes 2 0.0056516 110.54 By MS/MS By MS/MS 1 1 4757300 2087300 2670000 1259 2008 1353 2953;2954 2498;2499 2499 2870 2 IDSPGFKPASQQVYR AQPQPIHRIDSPGFKP PASQQVYRKDPYPEEM R I D Y R K 1 1 0 1 0 2 0 1 0 1 0 1 0 1 2 2 0 0 1 1 0 0 15 1 1691.8631 A0A087X0K9;G5E9E7 A0A087X0K9 898 912 TJP1 yes no 3 9.1055E-19 132.4 By MS/MS By MS/MS 1 1 10947000 5173000 5773600 1260 100 1354 2955;2956 2500;2501 2501 131 2 IDSTEVIYQPR GMDTFIHRIDSTEVIY TEVIYQPRRKRAKLIG R I D P R R 0 1 0 1 0 1 1 0 0 2 0 0 0 0 1 1 1 0 1 1 0 0 11 0 1319.6721 K7EMR0;K7EQN8;K7EP59;Q15831 K7EMR0 29 39 STK11 Serine/threonine-protein kinase STK11 yes no 2 0.0025223 72.243 By MS/MS By MS/MS 1 1 1653600 734220 919390 1261 1047 1355 2957;2958 2502;2503 2502 4217 2 IDTIEIITDR DYFEEYGKIDTIEIIT TIEIITDRQSGKKRGF K I D D R Q 0 1 0 2 0 0 1 0 0 4 0 0 0 0 0 0 2 0 0 0 0 0 10 0 1187.6398 P22626;A0A087WUI2 P22626 138 147 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 8.4334E-05 118.33 By MS/MS By matching 1 1 4556300 1739400 2816900 1262 1305 1356 2959;2960 2504 2504 1 IEDLSQQAQLAAAEK YIVFGEAKIEDLSQQA AQLAAAEKFKVQGEAV K I E E K F 4 0 0 1 0 3 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 15 0 1613.8261 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;Q13765;E9PAV3 F8W1N5 49 63 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 2 0.0002958 78.903 By MS/MS 1 786970 0 786970 1263 606 1357 2961 2505 2505 1 IEDVGSDEEDDSGK KDDEEKPKIEDVGSDE DEEDDSGKDKKKKTKK K I E G K D 0 0 0 4 0 0 3 2 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 0 1493.6005 P08238;Q58FF8 P08238 250 263 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 3.9384E-28 141.82 By MS/MS By MS/MS 1 2 21824000 7608500 14216000 1264 1237 1358 2962;2963;2964 2506;2507;2508;2509 2509 1633 4 IEDVGSDEEDDSGKDK KDDEEKPKIEDVGSDE EDDSGKDKKKKTKKIK K I E D K K 0 0 0 5 0 0 3 2 0 1 0 2 0 0 0 2 0 0 0 1 0 0 16 1 1736.7224 P08238;Q58FF8 P08238 250 265 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 0 233.47 By MS/MS By MS/MS 2 4 140540000 41876000 98667000 1265 1237 1359 2965;2966;2967;2968;2969;2970 2510;2511;2512;2513;2514;2515;2516 2512 1633 7 IEDVGSDEEDDSGKDKK KDDEEKPKIEDVGSDE DDSGKDKKKKTKKIKE K I E K K K 0 0 0 5 0 0 3 2 0 1 0 3 0 0 0 2 0 0 0 1 0 0 17 2 1864.8174 P08238;Q58FF8 P08238 250 266 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 2.6597E-57 153.48 By MS/MS By MS/MS 4 4 468020000 247560000 220470000 1266 1237 1360 2971;2972;2973;2974;2975;2976;2977;2978 2517;2518;2519;2520;2521;2522;2523;2524;2525 2520 1633 9 IEDVTPIPSDSTRR RSGMKIGRIEDVTPIP IPSDSTRRKGGRRGRR R I E R R K 0 2 0 2 0 0 1 0 0 2 0 0 0 0 2 2 2 0 0 1 0 0 14 1 1584.8107 P62263 P62263 129 142 RPS14 40S ribosomal protein S14 yes yes 3 0.0024006 60.209 By MS/MS By MS/MS 1 2 1942600 1049600 892960 1267 1429 1361 2979;2980;2981 2526;2527 2526 1917;3717 2 IEEFVYEKLDR LQPNPNARIEEFVYEK FVYEKLDRKAPSRINN R I E D R K 0 1 0 1 0 0 3 0 0 1 1 1 0 1 0 0 0 0 1 1 0 0 11 1 1439.7296 A0A087WW40;Q9Y371 A0A087WW40 75 85 SH3GLB1 Endophilin-B1 yes no 2;3 2.1804E-10 138.22 By matching By MS/MS 2 2 8499100 4152800 4346400 1268 60 1362 2982;2983;2984;2985 2528;2529 2528 4007 2 IEEGVPQFLVLISSGK FKRPLGSRIEEGVPQF LVLISSGKSDDEVDDP R I E G K S 0 0 0 0 0 1 2 2 0 2 2 1 0 1 1 2 0 0 0 2 0 0 16 0 1714.9505 E7ENL6;P12111 E7ENL6 725 740 COL6A3 Collagen alpha-3(VI) chain yes no 2 2.3286E-10 107.39 By MS/MS By MS/MS 1 1 12138000 7655900 4482300 1269 567 1363 2986;2987 2530;2531;2532 2530 3 IEIAQKHPDIYAVPIK LQEAQNARIEIAQKHP DIYAVPIKTHKPDPGT R I E I K T 2 0 0 1 0 1 1 0 1 4 0 2 0 0 2 0 0 0 1 1 0 0 16 1 1834.0353 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1167 1182 TJP2 Tight junction protein ZO-2 yes no 3 0.0066537 60.901 By MS/MS By MS/MS 1 1 3064200 1671000 1393200 1270 290 1364 2988;2989 2533;2534 2533 4056 0 IEIESFYEGEDFSETLTR LSSQHQARIEIESFYE DFSETLTRAKFEELNM R I E T R A 0 1 0 1 0 0 5 1 0 2 1 0 0 2 0 2 2 0 1 0 0 0 18 0 2163.9848 P11021 P11021 307 324 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0029496 89.013 By MS/MS By MS/MS 1 1 7098500 3347100 3751400 1271 1254 1365 2990;2991 2535;2536 2536 2 IEKIGEGTYGVVYK ________________ GTYGVVYKGRHKTTGQ K I E Y K G 0 0 0 0 0 0 2 3 0 2 0 2 0 0 0 0 1 0 2 2 0 0 14 1 1554.8294 E5RIU6;A0A087WZZ9;A0A024QZP7;P06493 E5RIU6 7 20 CDK1;CDC2 Cyclin-dependent kinase 1 yes no 2;3 9.0687E-07 106.67 By MS/MS By MS/MS 2 1 9212000 5681400 3530600 1272 0 1366 2992;2993;2994 2537;2538;2539 2539 3203;3996;3997 3 IEPIPGESPK KGQEVCVKIEPIPGES PIPGESPKMFGRHFEA K I E P K M 0 0 0 0 0 0 2 1 0 2 0 1 0 0 3 1 0 0 0 0 0 0 10 0 1065.5706 A0A087WUT6;O60841 A0A087WUT6 1161 1170 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0071426 69.815 By matching By MS/MS 1 1 2055100 821080 1234000 1273 43 1367 2995;2996 2540;2541 2541 51 2 IESDEEEDFENVGK ESTKKPYRIESDEEED EDFENVGKVGSPLDYS R I E G K V 0 0 1 2 0 0 5 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 14 0 1638.6897 Q96T23 Q96T23 1343 1356 RSF1 Remodeling and spacing factor 1 yes yes 2 5.1059E-09 110.55 By MS/MS By MS/MS 1 1 6091500 3213600 2878000 1274 1933 1368 2997;2998 2542;2543 2542 2735 2 IESPKLER VVTQPKPKIESPKLER IESPKLERTPNGPNID K I E E R T 0 1 0 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 8 1 970.54475 Q5TBM3;A0A0A0MSM0;Q92598 Q5TBM3 71 78 HSPH1 Heat shock protein 105 kDa yes no 2 0.01983 89.9 By MS/MS By matching 1 1 143360000 69895000 73461000 1275 166 1369 2999;3000 2544 2544 230 1 IEVIEIMTDR DYFEQYGKIEVIEIMT VIEIMTDRGSGKKRGF K I E D R G 0 1 0 1 0 0 2 0 0 3 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1217.6326 F8W6I7;P09651;F8VTQ5;H0YH80;F8VZ49;Q32P51;F8VYN5 F8W6I7 131 140 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 0.0057765 66.435 By MS/MS 1 0 0 0 1276 752 1370 3001 2545 2545 88 1 IEVLDSPASK NSEGGKGKIEVLDSPA VLDSPASKKKK_____ K I E S K K 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 0 0 0 1 0 0 10 0 1057.5655 Q8N5I9 Q8N5I9 173 182 C12orf45 Uncharacterized protein C12orf45 yes yes 2 1.1189E-06 132.56 By MS/MS By MS/MS 1 1 1595500 744510 850950 1277 1780 1371 3002;3003 2546;2547;2548 2548 2503 3 IFQCNTCVKVFSKFSNSNK CLSTTQSKIFQCNTCV SKFSNSNKHKIRHTGE K I F N K H 0 0 3 0 2 1 0 0 0 1 0 3 0 3 0 3 1 0 0 2 0 0 19 2 2307.114 A0A075B7G4;Q7Z3I0;Q8IYB9 A0A075B7G4 112 130 ZNF595;DKFZp313E1411 Zinc finger protein 595 yes no 3 0.0053312 55.33 By MS/MS 1 1306600 1306600 0 1278 18 1372 3004 2549 2549 3;333 19;20;3209 1 IFQNTHAIDKYSR LKGQTGFRIFQNTHAI HAIDKYSRLIFPASYI R I F S R L 1 1 1 1 0 1 0 0 1 2 0 1 0 1 0 1 1 0 1 0 0 0 13 1 1591.8107 P28476 P28476 434 446 GABRR2 Gamma-aminobutyric acid receptor subunit rho-2 yes yes 2 0.01983 47.261 By matching By MS/MS 1 1 3367800 1381000 1986800 1279 1319 1373 3005;3006 2550 2550 1737;4279 0 IFSLSGTLETVR QLRERHWRIFSLSGTL SGTLETVRGRGVVGRE R I F V R G 0 1 0 0 0 0 1 1 0 1 2 0 0 1 0 2 2 0 0 1 0 0 12 0 1321.7242 B4DEM9;Q9Y2S7 B4DEM9 268 279 POLDIP2 Polymerase delta-interacting protein 2 yes no 2 0.004725 80.69 By MS/MS By matching 1 1 1169800 630310 539490 1280 373 1374 3007;3008 2551 2551 3339 1 IFTSIGEDYDER PVASQLPRIFTSIGED IGEDYDERVLPSITT_ R I F E R V 0 1 0 2 0 0 2 1 0 2 0 0 0 1 0 1 1 0 1 0 0 0 12 0 1443.6518 D6RBK0;C9JZ20;E7ESE2;E9PCW0;C9JW96;P35232 D6RBK0 106 117 PHB Prohibitin yes no 2 0.0029365 76.943 By MS/MS By matching 1 1 1564800 784760 780010 1281 485 1375 3009;3010 2552 2552 1 IFVEESIYDEFVR QCCIAASRIFVEESIY SIYDEFVRRSVERAKK R I F V R R 0 1 0 1 0 0 3 0 0 2 0 0 0 2 0 1 0 0 1 2 0 0 13 0 1644.8035 P00352 P00352 309 321 ALDH1A1 Retinal dehydrogenase 1 yes yes 2 0.00073085 94.297 By MS/MS By MS/MS 1 1 4408400 2041600 2366800 1282 1202 1376 3011;3012 2553;2554 2554 2 IFVGGLNPEATEEK MKKDPVKKIFVGGLNP NPEATEEKIREYFGEF K I F E K I 1 0 1 0 0 0 3 2 0 1 1 1 0 1 1 0 1 0 0 1 0 0 14 0 1502.7617 D6R9P3;D6RD18;D6RBZ0 D6R9P3 156 169 HNRNPAB yes no 2 0.011816 58.676 By MS/MS By matching 1 1 920130 392890 527240 1283 521 1377 3013;3014 2555 2555 1 IFVGGLSPDTPEEK KTKEPVKKIFVGGLSP SPDTPEEKIREYFGGF K I F E K I 0 0 0 1 0 0 2 2 0 1 1 1 0 1 2 1 1 0 0 1 0 0 14 0 1487.7508 D6RAF8;Q14103;D6RF44;H0YA96;H0Y8G5 D6RAF8 184 197 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.0057282 66.262 By MS/MS By MS/MS 2 2 3989600 1896500 2093100 1284 524 1378;1379 3015;3016;3017;3018 2556;2557;2558 2557 711 3 IGDEYAEDSSDEEDIR RTEMASARIGDEYAED SSDEEDIRNTVGNVPL R I G I R N 1 1 0 4 0 0 4 1 0 2 0 0 0 0 0 2 0 0 1 0 0 0 16 0 1841.7439 A0A075B729;Q14137 A0A075B729 48 63 BOP1 Ribosome biogenesis protein BOP1 yes no 2 0.022371 56.339 By MS/MS 1 0 0 0 1285 11 1380 3019 2559 2559 9;10 1 IGEGTYGTVFK QKYEKLEKIGEGTYGT GTYGTVFKAKNRETHE K I G F K A 0 0 0 0 0 0 1 3 0 1 0 1 0 1 0 0 2 0 1 1 0 0 11 0 1170.5921 Q00535 Q00535 10 20 CDK5 Cyclin-dependent-like kinase 5 yes yes 2 0.012087 76.064 By matching By MS/MS 1 1 2371900 1143200 1228700 1286 1447 1381 3020;3021 2560 2560 3725 1 IGEGTYGVVYK EDYTKIEKIGEGTYGV GTYGVVYKGRHKTTGQ K I G Y K G 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 0 11 0 1184.6077 E5RIU6;A0A087WZZ9;A0A024QZP7;P06493;E7ESI2;G3V5T9;P24941;G3V317;K7ELV5;Q00526 E5RIU6 10 20 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 no no 2 8.3469E-06 120.31 By MS/MS By MS/MS 4 4 457120000 206030000 251080000 1287 0;584 1382;1383 3022;3023;3024;3025;3026;3027;3028;3029 2561;2562;2563;2564;2565;2566;2567;2568 2564 3203;3418;3996;3997;4143;4144 8 IGEGTYGVVYKGR EDYTKIEKIGEGTYGV YGVVYKGRHKTTGQVV K I G G R H 0 1 0 0 0 0 1 4 0 1 0 1 0 0 0 0 1 0 2 2 0 0 13 1 1397.7303 E5RIU6;A0A087WZZ9;A0A024QZP7;P06493 E5RIU6 10 22 CDK1;CDC2 Cyclin-dependent kinase 1 yes no 2;3 0.0009071 76.282 By MS/MS By MS/MS 2 3 7608200 3421800 4186400 1288 0 1384;1385 3030;3031;3032;3033;3034 2569;2570;2571;2572 2569 3203;3996;3997 4 IGGDAATTVNNSTPDFGFGGQKR RARQIAAKIGGDAATT FGFGGQKRQLEDGDQP K I G K R Q 2 1 2 2 0 1 0 5 0 1 0 1 0 2 1 1 3 0 0 1 0 0 23 1 2309.1036 M0R0I5;A0A087WTP3;Q92945 M0R0I5 31 53 KHSRP Far upstream element-binding protein 2 yes no 3 0.0010905 58.564 By MS/MS By matching 1 1 6505900 3161200 3344700 1289 29 1386 3035;3036 2573 2573 30 1 IGGIGTVPVGR LPLQDVYKIGGIGTVP IGTVPVGRVETGVLKP K I G G R V 0 1 0 0 0 0 0 4 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1024.6029 Q5VTE0;P68104;A0A087WVQ9 Q5VTE0 256 266 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 no no 2 0.0058149 75.043 By MS/MS By MS/MS 1 1 3624300 1623700 2000500 1290 1438 1387 3037;3038 2574;2575 2575 2 IGPLGLSPK ATSALAPKIGPLGLSP GPLGLSPKKVGDDIAK K I G P K K 0 0 0 0 0 0 0 2 0 1 2 1 0 0 2 1 0 0 0 0 0 0 9 0 880.5382 P30050 P30050 32 40 RPL12 60S ribosomal protein L12 yes yes 2 0.0076684 84.188 By MS/MS 1 3740000 0 3740000 1291 1326 1388 3039 2576 2576 1750 1 IGSDPLAYEPK SPTMSRARIGSDPLAY DPLAYEPKEDLPVITI R I G P K E 1 0 0 1 0 0 1 1 0 1 1 1 0 0 2 1 0 0 1 0 0 0 11 0 1188.6027 P19634 P19634 701 711 SLC9A1 Sodium/hydrogen exchanger 1 yes yes 2 0.0048922 73.466 By MS/MS By MS/MS 1 1 970320 418960 551360 1292 1295 1389 3040;3041 2577;2578 2577 1704 2 IGSLGLGTGEDDDYVDDFNSTSHR DLKLISDKIGSLGLGT DFNSTSHRSEKSEISI K I G H R S 0 1 1 5 0 0 1 4 1 1 2 0 0 1 0 3 2 0 1 1 0 0 24 0 2569.1205 A0A087WV25;O95684 A0A087WV25 277 300 FGFR1OP FGFR1 oncogene partner yes no 3 2.7774E-09 95.361 By matching By MS/MS 1 1 43141000 11417000 31724000 1293 50 1390 3042;3043 2579 2579 4005 1 IGSSEPIHR I G H R 0 1 0 0 0 0 1 1 1 2 0 0 0 0 1 2 0 0 0 0 0 0 9 0 994.51959 REV__Q13469 yes yes 3 0.015341 56.432 By matching By MS/MS 1 2 1558000 407520 1150400 + 1294 2207 1391 3044;3045;3046 2580 2580 3194 1 IGSSTNTLSALKTAFADK QSWIRDIKIGSSTNTL LKTAFADKETQAIYLL K I G D K E 3 0 1 1 0 0 0 1 0 1 2 2 0 1 0 3 3 0 0 0 0 0 18 1 1823.9629 H0YF54;Q502W6 H0YF54 61 78 VWA3B von Willebrand factor A domain-containing protein 3B yes no 2 0.0058547 47.712 By MS/MS By matching 1 1 10749000 5879400 4869400 1295 882 1392 3047;3048 2581 2581 129 1187;1188;1189;3526;3527 1 IGTAEPDYGALYEGR INEEALEKIGTAEPDY YGALYEGRNPGFYVEA K I G G R N 2 1 0 1 0 0 2 3 0 1 1 0 0 0 1 0 1 0 2 0 0 0 15 0 1610.7577 P19174 P19174 764 778 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 2 3.1585E-14 117.09 By MS/MS By MS/MS 1 1 15211000 4700600 10511000 1296 1293 1393 3049;3050 2582;2583 2583 4273 2 IGTLHTSPDLK FVRKTTEKIGTLHTSP LHTSPDLKVRPELRGD K I G L K V 0 0 0 1 0 0 0 1 1 1 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1180.6452 Q9UPZ3 Q9UPZ3 557 567 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 2 0.0030021 81.95 By MS/MS By MS/MS 1 1 2952400 1405000 1547400 1297 2133 1394 3051;3052 2584;2585 2584 3067;3962 2 IHHFIINNKDTFFSNATR TGPFSRARIHHFIINN TFFSNATRSRIVYHML R I H T R S 1 1 3 1 0 0 0 0 2 3 0 1 0 3 0 1 2 0 0 0 0 0 18 1 2174.1021 E9PQ79;Q9BYT9 E9PQ79 272 289 ANO3 Anoctamin;Anoctamin-3 yes no 3 0.011551 52.453 By MS/MS 1 10245000 0 10245000 1298 677 1395 3053 2586 2586 101 3452;3453 1 IHIDPEIQDGSPTTSR DSKAQAHRIHIDPEIQ DGSPTTSRRPSGTGTG R I H S R R 0 1 0 2 0 1 1 1 1 3 0 0 0 0 2 2 2 0 0 0 0 0 16 0 1764.8642 C9J542;P50479 C9J542 43 58 PDLIM4 PDZ and LIM domain protein 4 yes no 2 0.00073763 87.519 By matching By MS/MS 1 1 5861200 2984200 2877100 1299 443 1396 3054;3055 2587 2587 638 1 IHLGSSPK NQGVSEERIHLGSSPK IHLGSSPKKGGNCDLS R I H P K K 0 0 0 0 0 0 0 1 1 1 1 1 0 0 1 2 0 0 0 0 0 0 8 0 837.47085 Q5JW53;Q9H410 Q5JW53 53 60 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.0056808 100.02 By MS/MS By MS/MS 1 1 7697700 3263700 4434000 1300 1612 1397 3056;3057 2588;2589;2590 2590 2239;2240 3 IHQSTYGK LSEEEKSRIHQSTYGK IHQSTYGKSLAIMTEA R I H G K S 0 0 0 0 0 1 0 1 1 1 0 1 0 0 0 1 1 0 1 0 0 0 8 0 932.47158 P54198 P54198 374 381 HIRA Protein HIRA yes yes 2 0.013297 54.539 By MS/MS 1 0 0 0 1301 1409 1398 3058 2591 2591 1902;3714 1 IHRASDPGLPAEEPK GRFHLPPRIHRASDPG GLPAEEPKEKSSRKVA R I H P K E 2 1 0 1 0 0 2 1 1 1 1 1 0 0 3 1 0 0 0 0 0 0 15 1 1615.8318 F8VPD4;P27708 F8VPD4 1792 1806 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 2;3 0.0026498 62.469 By MS/MS By MS/MS 2 2 31293000 18203000 13089000 1302 731 1399 3059;3060;3061;3062 2592;2593;2594 2594 973 3 IHRASDPGLPAEEPKEK GRFHLPPRIHRASDPG PAEEPKEKSSRKVAEP R I H E K S 2 1 0 1 0 0 3 1 1 1 1 2 0 0 3 1 0 0 0 0 0 0 17 2 1872.9694 F8VPD4;P27708 F8VPD4 1792 1808 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 3;4 0.004246 64.298 By MS/MS By MS/MS 2 2 139880000 69504000 70375000 1303 731 1400 3063;3064;3065;3066 2595;2596 2595 973 2 IHSPIIR LVVVKEEKIHSPIIRS KIHSPIIRSEPFSPSL K I H I R S 0 1 0 0 0 0 0 0 1 3 0 0 0 0 1 1 0 0 0 0 0 0 7 0 834.50757 O60885 O60885 1115 1121 BRD4 Bromodomain-containing protein 4 yes yes 2 0.0044915 128.12 By MS/MS By MS/MS 1 1 32426000 15033000 17392000 1304 1149 1401 3067;3068 2597;2598 2597 1533 2 IHSPIPDMSK TSPSTATKIHSPIPDM SPIPDMSKFATGITPF K I H S K F 0 0 0 1 0 0 0 0 1 2 0 1 1 0 2 2 0 0 0 0 0 0 10 0 1123.5696 Q6NZY4 Q6NZY4 656 665 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 2 0.007667 67.93 By MS/MS 1 6600300 6600300 0 1305 1674 1402 3069 2599 2599 2341 1 IIASLADRPYEEPPQKPPR QLLGHRKRIIASLADR EPPQKPPRFSQLRCQD R I I P R F 2 2 0 1 0 1 2 0 0 2 1 1 0 0 5 1 0 0 1 0 0 0 19 2 2176.1641 Q92625 Q92625 825 843 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 3 0.0086153 60.209 By MS/MS By matching 1 1 3194400 1843800 1350600 1306 1855 1403 3070;3071 2600 2600 2617 1 IIEQLSPQAATSR TSLRQINKIIEQLSPQ SPQAATSRDINRKLDS K I I S R D 2 1 0 0 0 2 1 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 13 0 1412.7623 Q03468;D6R9X7 Q03468 153 165 ERCC6 DNA excision repair protein ERCC-6 yes no 2 0.0008328 80.102 By matching By MS/MS 1 1 1374800 671170 703610 1307 1461 1404 3072;3073 2601 2601 1960 0 IIGEKSFR LCDFGFARIIGEKSFR IIGEKSFRRSVVGTPA R I I F R R 0 1 0 0 0 0 1 1 0 2 0 1 0 1 0 1 0 0 0 0 0 0 8 1 948.53927 B4DTS2;Q9BZL6;H0Y5M6;Q15139;F8WBA3;O94806 Q15139 733 740 PRKD2;PRKD3;PRKD1 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase D3 no no 2 0.013356 100.69 By MS/MS By MS/MS 1 1 12187000 5547900 6638800 1308 1545;380 1405 3074;3075 2602;2603 2602 541 2 IILDLISESPIK DRVVECIKIILDLISE LISESPIKGRAQPYDP K I I I K G 0 0 0 1 0 0 1 0 0 4 2 1 0 0 1 2 0 0 0 0 0 0 12 0 1339.7963 P61978;Q5T6W2 P61978 208 219 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 2.4972E-08 114.7 By matching By MS/MS 1 1 1939400 999270 940130 1309 1423 1406 3076;3077 2604 2604 1915 1 IILDLISESPIKGR DRVVECIKIILDLISE SESPIKGRAQPYDPNF K I I G R A 0 1 0 1 0 0 1 1 0 4 2 1 0 0 1 2 0 0 0 0 0 0 14 1 1552.9188 P61978;Q5T6W2 P61978 208 221 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2;3 0.00059158 83.862 By MS/MS By MS/MS 2 2 7717500 3610200 4107300 1310 1423 1407 3078;3079;3080;3081 2605;2606 2605 1915 1 IILNSHSPAGSAAISQQDFHPK DFLFRASRIILNSHSP SQQDFHPKCSTANSRL R I I P K C 3 0 1 1 0 2 0 1 2 3 1 1 0 1 2 4 0 0 0 0 0 0 22 0 2317.1815 Q9UPU5 Q9UPU5 1606 1627 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 3 0.015158 42.908 By matching By MS/MS 1 1 3723400 2087800 1635600 1311 2132 1408 3082;3083 2607 2607 3063 1 IIQEASDTSPR I I P R 1 1 0 1 0 1 1 0 0 2 0 0 0 0 1 2 1 0 0 0 0 0 11 0 1215.6095 REV__Q6ZWK6 yes yes 2 0.0095758 62.466 By MS/MS 1 1876600 0 1876600 + 1312 2209 1409 3084 2608 2608 3196 1 IISFLYSTVGALNK IGDENFNKIISFLYST STVGALNKIGTDGTQV K I I N K I 1 0 1 0 0 0 0 1 0 2 2 1 0 1 0 2 1 0 1 1 0 0 14 0 1524.8552 Q05707;A0A0A0MQT7 Q05707 1051 1064 COL14A1 Collagen alpha-1(XIV) chain yes no 2 2.6838E-14 124.67 By MS/MS By MS/MS 1 1 4215100 2500200 1714900 1313 1466 1410 3085;3086 2609;2610 2609 2 IISIFSGTEK EEKKPRHKIISIFSGT SIFSGTEKGSKKKEKE K I I E K G 0 0 0 0 0 0 1 1 0 3 0 1 0 1 0 2 1 0 0 0 0 0 10 0 1093.6019 Q13177 Q13177 53 62 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 2 0.0068712 72.34 By matching By MS/MS 1 1 5504800 2571700 2933000 1314 1493 1411 3087;3088 2611 2611 2040 1 IISNASCTTNCLAPLAK EKYDNSLKIISNASCT NCLAPLAKVIHDNFGI K I I A K V 3 0 2 0 2 0 0 0 0 2 2 1 0 0 1 2 2 0 0 0 0 0 17 0 1832.9125 E7EUT5;P04406 E7EUT5 71 87 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.0076217 57.159 By matching By MS/MS 2 2 11386000 5503900 5882000 1315 594 1412 3089;3090;3091;3092 2612;2613 2613 2 IIVDTYGGWGAHGGGAFSGK DAGVTGRKIIVDTYGG GGGAFSGKDYTKVDRS K I I G K D 2 0 0 1 0 0 0 7 1 2 0 1 0 1 0 1 1 1 1 1 0 0 20 0 1948.9432 Q00266;P31153 Q00266 266 285 MAT1A;MAT2A S-adenosylmethionine synthase isoform type-1;S-adenosylmethionine synthase isoform type-2 yes no 3 0.0051356 61.87 By MS/MS 1 913510 913510 0 1316 1330 1413 3093 2614 2614 1 IIYDSDSESEETLQVK KQPSKKKRIIYDSDSE SEETLQVKNAKKPPEK R I I V K N 0 0 0 2 0 1 3 0 0 2 1 1 0 0 0 3 1 0 1 1 0 0 16 0 1854.8735 P35251;D6RAD2;E0CX09 P35251 65 80 RFC1 Replication factor C subunit 1 yes no 2 1.1199E-17 114.31 By MS/MS By MS/MS 1 1 5775500 2594400 3181100 1317 1338 1414 3094;3095 2615;2616;2617;2618 2618 1757;1758;4284 4 IIYGGSVTGATCK DAVAQSTRIIYGGSVT SVTGATCKELASQPDV R I I C K E 1 0 0 0 1 0 0 3 0 2 0 1 0 0 0 1 2 0 1 1 0 0 13 0 1325.6649 P60174 P60174 244 256 TPI1 Triosephosphate isomerase yes yes 2 0.013701 56.548 By matching By MS/MS 1 1 1755800 840190 915580 1318 1420 1415 3096;3097 2619 2619 1909 1 IIYNLFHK SAEDKSYRIIYNLFHK IIYNLFHKTVPEFKYR R I I H K T 0 0 1 0 0 0 0 0 1 2 1 1 0 1 0 0 0 0 1 0 0 0 8 0 1046.5913 H7C5K7;C9JXM5;G5E9W1;Q7Z3E1 H7C5K7 179 186 TIPARP TCDD-inducible poly [ADP-ribose] polymerase yes no 2 0.0081127 64.776 By MS/MS 1 0 0 0 1319 489 1416 3098 2620 2620 69 4117 1 IKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSK PAVPPGVRIKEEPVSE SPSGLHSKLANGLPLG R I K S K L 1 0 0 2 0 1 12 2 1 1 1 2 1 0 3 4 1 0 0 1 0 0 33 1 3699.5741 A0A0C4DH01;Q9NVU0 A0A0C4DH01 461 493 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes no 4 4.8309E-05 54.255 By MS/MS By matching 1 1 10426000 7762800 2663300 1320 222 1417 3099;3100 2621 2621 34 319 1 IKNENTEGSPQEDGVELEGLK AEKKNKKKIKNENTEG GVELEGLKQRLEKKQK K I K L K Q 0 0 2 1 0 1 5 3 0 1 2 2 0 0 1 1 1 0 0 1 0 0 21 1 2285.1023 P11388 P11388 1239 1259 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.0010954 76.015 By MS/MS By MS/MS 1 1 43760000 22677000 21082000 1321 1258 1418 3101;3102 2622;2623 2623 1660;3650 2 IKPNLSSSPR EPEVCPTKIKPNLSSS PNLSSSPRSEETTASS K I K P R S 0 1 1 0 0 0 0 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 10 1 1097.6193 A0A1P0AZG4;A0A1B0GUH9 A0A1P0AZG4 288 297 yes no 2 0.0094342 84.188 By MS/MS By MS/MS 1 1 4401200 1903300 2497900 1322 293 1419 3103;3104 2624;2625 2624 415 2 IKSIISLSGPNIK I K I K 0 0 1 0 0 0 0 1 0 4 1 2 0 0 1 3 0 0 0 0 0 0 13 1 1368.8341 REV__D6REQ4 yes yes 2 0.022465 42.395 By MS/MS 1 404190 0 404190 + 1323 2193 1420 3105 2626 2626 3181 0 IKTEPSSPLSDPSDIIR ASPVTEVRIKTEPSSP SDPSDIIRVTVGDAAT R I K I R V 0 1 0 2 0 0 1 0 0 3 1 1 0 0 3 4 1 0 0 0 0 0 17 1 1853.9735 Q9ULJ3 Q9ULJ3 429 445 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2;3 0.0082053 62.165 By MS/MS By MS/MS 2 2 8377800 3736000 4641800 1324 2119 1421 3106;3107;3108;3109 2627;2628;2629 2627 3033;3034 3 ILATDVSSKNTPDSK QAHEVHQKILATDVSS SKNTPDSKKISSRNIN K I L S K K 1 0 1 2 0 0 0 0 0 1 1 2 0 0 1 3 2 0 0 1 0 0 15 1 1574.8152 H0Y8J2;Q03188 H0Y8J2 27 41 CENPC Centromere protein C yes no 2 0.00034001 91.093 By MS/MS 1 3565800 3565800 0 1325 852 1422 3110 2630 2630 3515 1 ILCKSPQSDPADTPTNTK TDEKTTKKILCKSPQS ADTPTNTKQRPKRSLK K I L T K Q 1 0 1 2 1 1 0 0 0 1 1 2 0 0 3 2 3 0 0 0 0 0 18 1 1971.9572 P46013 P46013 1857 1874 MKI67 Antigen KI-67 yes yes 3 0.0041539 54.974 By MS/MS By MS/MS 1 1 6342400 3406600 2935800 1326 1361 1423 3111;3112 2631;2632 2632 1787 2 ILDEEVFEGDIQQLLFVSDHR GIIVFGTRILDEEVFE LLFVSDHRAAYDYCEH R I L H R A 0 1 0 3 0 2 3 1 1 2 3 0 0 2 0 1 0 0 0 2 0 0 21 0 2501.2438 A0A087WXW9;P20908 A0A087WXW9 211 231 COL5A1 Collagen alpha-1(V) chain yes no 3 0.0021269 73.21 By MS/MS By matching 1 1 4791300 2427800 2363500 1327 76 1424 3113;3114 2633 2633 0 ILELTPEPDRPR LIQHQDMRILELTPEP TPEPDRPRILPPDQRP R I L P R I 0 2 0 1 0 0 2 0 0 1 2 0 0 0 3 0 1 0 0 0 0 0 12 1 1434.7831 Q14004 Q14004 1242 1253 CDK13 Cyclin-dependent kinase 13 yes yes 2 5.7477E-05 109.6 By MS/MS By MS/MS 1 1 14201000 6559600 7641300 1328 1512 1425 3115;3116 2634;2635 2635 3745 2 ILEQQNSSRTLEK ANWEAQQRILEQQNSS NSSRTLEKNKKKGKIF R I L E K N 0 1 1 0 0 2 2 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 13 1 1544.8158 Q5JXL7;G3V1Q4;E7ES33;E7EPK1;Q16181 Q5JXL7 68 80 DKFZp586I031;SEPT7 Septin-7 yes no 2;3 3.3604E-09 119.77 By MS/MS By MS/MS 3 4 174560000 85994000 88561000 1329 569 1426;1427 3117;3118;3119;3120;3121;3122;3123 2636;2637;2638;2639;2640;2641;2642 2636 88 755;756;3405 7 ILEQQNSSRTLEKNK ANWEAQQRILEQQNSS SRTLEKNKKKGKIF__ R I L N K K 0 1 2 0 0 2 2 0 0 1 2 2 0 0 0 2 1 0 0 0 0 0 15 2 1786.9537 Q5JXL7;G3V1Q4;E7ES33;E7EPK1;Q16181 Q5JXL7 68 82 DKFZp586I031;SEPT7 Septin-7 yes no 3 0.00057959 81.713 By MS/MS By matching 1 1 9531200 5225300 4306000 1330 569 1428 3124;3125 2643 2643 755;756;3405 1 ILFIFIDSDHTDNQR AAESFKGKILFIFIDS SDHTDNQRILEFFGLK K I L Q R I 0 1 1 3 0 1 0 0 1 3 1 0 0 2 0 1 1 0 0 0 0 0 15 0 1832.9057 I3L4M2;I3L398;H0Y3Z3;H7BZ94;P07237 I3L4M2 89 103 P4HB Protein disulfide-isomerase yes no 2 0.002696 69.349 By MS/MS By matching 1 1 1002600 552770 449840 1331 821 1429 3126;3127 2644 2644 1 ILGDMQPGDYFDLVLFGTR QTKEALLKILGDMQPG DLVLFGTRVQSWKGSL K I L T R V 0 1 0 3 0 1 0 3 0 1 3 0 1 2 1 0 1 0 1 1 0 0 19 0 2156.0612 P19827 P19827 318 336 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes yes 2 1.4773E-05 97.797 By MS/MS By matching 1 1 15211000 7321500 7889300 1332 1296 1430 3128;3129 2645;2646 2646 169 2 ILGSASPEEEQEKPILDRPTR EYAEARKRILGSASPE PILDRPTRISQPEDSR R I L T R I 1 2 0 1 0 1 4 1 0 2 2 1 0 0 3 2 1 0 0 0 0 0 21 2 2364.2285 Q7Z422 Q7Z422 102 122 SZRD1 SUZ domain-containing protein 1 yes yes 3 0.015959 51.089 By matching By MS/MS 1 1 17614000 10461000 7153300 1333 1713 1431 3130;3131 2647 2647 2397;2398 1 ILITIVEEVETLR VTVEKVIKILITIVEE VEEVETLRQERLSFSG K I L L R Q 0 1 0 0 0 0 3 0 0 3 2 0 0 0 0 0 2 0 0 2 0 0 13 0 1526.892 Q15149 Q15149 3424 3436 PLEC Plectin yes yes 2 1.7732E-21 141.08 By MS/MS 1 4088500 4088500 0 1334 1546 1432 3132 2648 2648 1 ILKSPEIQR MINTDLSRILKSPEIQ LKSPEIQRALRAPRKK R I L Q R A 0 1 0 0 0 1 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1082.6448 H3BM89;P36578 H3BM89 198 206 RPL4 60S ribosomal protein L4 yes no 2 0.0044128 101.39 By MS/MS By matching 1 1 13797000 6779800 7017100 1335 905 1433 3133;3134 2649 2649 1213 1 ILLAELEQLK RFLEQQNKILLAELEQ LAELEQLKGQGKSRLG K I L L K G 1 0 0 0 0 1 2 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 10 0 1168.7067 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0 P08670 130 139 VIM Vimentin yes no 2 0.0071234 80.455 By MS/MS By MS/MS 1 1 2352800 1277800 1075000 1336 1243 1434 3135;3136 2650;2651 2650 2 ILLAELEQLKGQGK RFLEQQNKILLAELEQ EQLKGQGKSRLGDLYE K I L G K S 1 0 0 0 0 2 2 2 0 1 4 2 0 0 0 0 0 0 0 0 0 0 14 1 1538.9032 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0 P08670 130 143 VIM Vimentin yes no 3 0.00016062 77.279 By MS/MS 1 587410 587410 0 1337 1243 1435 3137 2652 2652 1 ILLVDSPGMGNADDEQQEEGTSSK KPTHEDSKILLVDSPG QEEGTSSKQVVKQGLQ K I L S K Q 1 0 1 3 0 2 3 3 0 1 2 1 1 0 1 3 1 0 0 1 0 0 24 0 2519.1333 Q9UKN8 Q9UKN8 606 629 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3 0.00092734 57.826 By MS/MS By MS/MS 1 2 13418000 6049400 7369000 1338 2111 1436 3138;3139;3140 2653;2654 2653 304 3023 2 ILQEKLDQPVSAPPSPR DKLEAEKRILQEKLDQ VSAPPSPRDISMEIDS R I L P R D 1 1 0 1 0 2 1 0 0 1 2 1 0 0 4 2 0 0 0 1 0 0 17 1 1874.0262 Q16204 Q16204 230 246 CCDC6 Coiled-coil domain-containing protein 6 yes yes 3 0.002102 80.683 By MS/MS By MS/MS 1 1 5578000 3325300 2252700 1339 1572 1437 3141;3142 2655;2656 2655 2168;2169 2 ILRLSTFEK MAFANFRRILRLSTFE LRLSTFEKRKSREYEH R I L E K R 0 1 0 0 0 0 1 0 0 1 2 1 0 1 0 1 1 0 0 0 0 0 9 1 1105.6495 O94804 O94804 9 17 STK10 Serine/threonine-protein kinase 10 yes yes 2 0.013504 86.463 By MS/MS 1 1536400 1536400 0 1340 1174 1438 3143 2657 2657 1568 1 ILSLSEEGSLER NSPQALKKILSLSEEG SEEGSLERHKKQAEDT K I L E R H 0 1 0 0 0 0 3 1 0 1 3 0 0 0 0 3 0 0 0 0 0 0 12 0 1331.6933 H0Y8H7;Q9Y4G8 H0Y8H7 119 130 RAPGEF2 Rap guanine nucleotide exchange factor 2 yes no 2 0.0013434 89.663 By MS/MS By MS/MS 1 1 894900 357000 537900 1341 851 1439 3144;3145 2658;2659 2659 1147 2 ILSQSTDSLNMR ESPLGLRRILSQSTDS STDSLNMRNRTLSVES R I L M R N 0 1 1 1 0 1 0 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 12 0 1363.6766 V9GYM8;Q92974;V9GYF5;V9GYG5;V9GZ14 V9GYM8 215 226 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 8.42E-09 120.53 By MS/MS By MS/MS 2 2 24804000 11240000 13564000 1342 1870 1440;1441 3146;3147;3148;3149 2660;2661;2662;2663 2663 271 2643 4 ILTTNTWSSELSK EHWVPREKILTTNTWS TWSSELSKLAANAFLA K I L S K L 0 0 1 0 0 0 1 0 0 1 2 1 0 0 0 3 3 1 0 0 0 0 13 0 1478.7617 O60701 O60701 208 220 UGDH UDP-glucose 6-dehydrogenase yes yes 2 0.010799 55.98 By MS/MS By matching 1 1 2616200 1104500 1511700 1343 1142 1442 3150;3151 2664 2664 157 1520;1521 0 ILVPKSPVK DLAKSGIKILVPKSPV LVPKSPVKSRTAVDGF K I L V K S 0 0 0 0 0 0 0 0 0 1 1 2 0 0 2 1 0 0 0 2 0 0 9 1 979.643 Q9Y232 Q9Y232 196 204 CDYL Chromodomain Y-like protein yes yes 2 0.0032166 97.452 By MS/MS By matching 1 1 30375000 16298000 14077000 1344 2140 1443 3152;3153 2665 2665 3103 1 ILVPKSPVKSR DLAKSGIKILVPKSPV PKSPVKSRTAVDGFQS K I L S R T 0 1 0 0 0 0 0 0 0 1 1 2 0 0 2 2 0 0 0 2 0 0 11 2 1222.7761 Q9Y232 Q9Y232 196 206 CDYL Chromodomain Y-like protein yes yes 3 0.015082 50.806 By MS/MS 1 0 0 0 1345 2140 1444 3154 2666 2666 3103 1 IMGPNYTPGKK VSTGLKVRIMGPNYTP PNYTPGKKEDLYLKPI R I M K K E 0 0 1 0 0 0 0 2 0 1 0 2 1 0 2 0 1 0 1 0 0 0 11 1 1204.6274 P13639 P13639 429 439 EEF2 Elongation factor 2 yes yes 2 0.013494 76.165 By MS/MS By MS/MS 1 1 4194500 1544100 2650300 1346 1269 1445 3155;3156 2667;2668 2667 3656;4269 2 IMMKCWDYK HCPEDISKIMMKCWDY MMKCWDYKPENRPKFS K I M Y K P 0 0 0 1 1 0 0 0 0 1 0 2 2 0 0 0 0 1 1 0 0 0 9 1 1273.5658 W0S4B9;P16591 W0S4B9 381 389 Pe1Fe10;FER Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Fer yes no 3 0.021733 44.349 By MS/MS 1 0 0 0 1347 1278 1446 3157 2669 2669 1 IMPASTFDMDK YGEDGNGKIMPASTFD ASTFDMDKLKSTLKQF K I M D K L 1 0 0 2 0 0 0 0 0 1 0 1 2 1 1 1 1 0 0 0 0 0 11 0 1254.5624 Q5T8V1;Q8N4J0 Q5T8V1 86 96 C9orf41 UPF0586 protein C9orf41 yes no 2 0.0086892 49.5 By matching By MS/MS 1 1 2009000 632020 1377000 1348 1633 1447 3158;3159 2670 2670 235;236 2275;3801 1 IMSCSPDTQCSR LLKKQVVRIMSCSPDT SPDTQCSRDHSMEDPD R I M S R D 0 1 0 1 2 1 0 0 0 1 0 0 1 0 1 3 1 0 0 0 0 0 12 0 1440.5796 K7EQ12;Q9C0C9 K7EQ12 157 168 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 2 0.017581 55.724 By MS/MS By matching 1 1 2757000 1326200 1430800 1349 1050 1448 3160;3161 2671 2671 1387 1 INEELESQYQQSMDSK RTGEEDKKINEELESQ YQQSMDSKLSGRYRRH K I N S K L 0 0 1 1 0 3 3 0 0 1 1 1 1 0 0 3 0 0 1 0 0 0 16 0 1927.8469 E9PM92;O00193;E9PRZ9 E9PM92 76 91 C11orf58;SMAP Small acidic protein yes no 2 0.0094297 62.732 By MS/MS By matching 1 1 1616700 713600 903100 1350 666 1449 3162;3163 2672 2672 4157 0 INFDVNGYIVGANIETYLLEK SRFGKFIRINFDVNGY IETYLLEKSRAIRQAK R I N E K S 1 0 3 1 0 0 2 2 0 3 2 1 0 1 0 0 1 0 2 2 0 0 21 0 2384.2264 P35579 P35579 241 261 MYH9 Myosin-9 yes yes 2 0.0028279 77.191 By MS/MS By matching 1 1 15812000 9502200 6310000 1351 1340 1450 3164;3165 2673 2673 1 INPPSSGGTSSSPIK NRRQKEKRINPPSSGG GTSSSPIKAIFPSPTS R I N I K A 0 0 1 0 0 0 0 2 0 2 0 1 0 0 3 5 1 0 0 0 0 0 15 0 1427.7256 A0A0C4DG88;P14859;A0A0A0MT46 A0A0C4DG88 345 359 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 2 2.3082E-07 104.09 By MS/MS By MS/MS 1 1 12737000 4755800 7981200 1352 207 1451 3166;3167 2674;2675 2674 298;3289 2 INSDDSNLYLTASK RRIGDVVRINSDDSNL NLYLTASKKKPTCC__ R I N S K K 1 0 2 2 0 0 0 0 0 1 2 1 0 0 0 3 1 0 1 0 0 0 14 0 1539.7417 C9JY26;Q9BZG1 C9JY26 239 252 RAB34 Ras-related protein Rab-34 yes no 2 1.4171E-15 126.71 By MS/MS By MS/MS 1 1 3939400 1927900 2011500 1353 490 1452 3168;3169 2676;2677 2676 3376;4118 2 INTQWLLTSGTTEANAWK YVGGAEARINTQWLLT TTEANAWKSTLVGHDT R I N W K S 2 0 2 0 0 1 1 1 0 1 2 1 0 0 0 1 4 2 0 0 0 0 18 0 2033.0218 CON__Streptavidin CON__Streptavidin 105 122 yes yes 3 7.6582E-10 105.02 By MS/MS By MS/MS 1 1 5972400 3456600 2515800 + 1354 514 1453 3170;3171 2678;2679 2678 2 INTQWLLTSGTTEANAWKSTLVGHDTFTK YVGGAEARINTQWLLT VGHDTFTKVKPSAASI R I N T K V 2 0 2 1 0 1 1 2 1 1 3 2 0 1 0 2 7 2 0 1 0 0 29 1 3219.62 CON__Streptavidin CON__Streptavidin 105 133 yes yes 3;4 2.9858E-08 85.182 By MS/MS By MS/MS 2 2 54887000 27131000 27755000 + 1355 514 1454 3172;3173;3174;3175 2680;2681;2682 2682 3 IPAKLSPTQLR SGQETFWRIPAKLSPT KLSPTQLRRAAASLSQ R I P L R R 1 1 0 0 0 1 0 0 0 1 2 1 0 0 2 1 1 0 0 0 0 0 11 1 1222.7398 Q9UNS1 Q9UNS1 1082 1092 TIMELESS Protein timeless homolog yes yes 2 0.0092976 78.486 By matching By MS/MS 1 1 2786500 1365900 1420600 1356 2129 1455 3176;3177 2683 2683 3054 1 IPCESPPLEVVDTTASTKR LTAGKATKIPCESPPL DTTASTKRHLRTRVQK K I P K R H 1 1 0 1 1 0 2 0 0 1 1 1 0 0 3 2 3 0 0 2 0 0 19 1 2099.0569 P46013 P46013 2704 2722 MKI67 Antigen KI-67 yes yes 3 0.016195 40.158 By MS/MS By matching 1 1 2242200 1092500 1149700 1357 1361 1456 3178;3179 2684 2684 1788 1 IPGDQVVSVVFIK TLESEYLKIPGDQVVS VVSVVFIKELDGWVFV K I P I K E 0 0 0 1 0 1 0 1 0 2 0 1 0 1 1 1 0 0 0 4 0 0 13 0 1399.8075 P98160 P98160 126 138 HSPG2 Basement membrane-specific heparan sulfate proteoglycan core protein;Endorepellin;LG3 peptide yes yes 2 0.013099 59.84 By MS/MS By matching 1 1 3154200 1654900 1499300 1358 1446 1457 3180;3181 2685 2685 1 IPNYQLSPTKLPSINK SNTLAKMRIPNYQLSP TKLPSINKSKDRASQQ R I P N K S 0 0 2 0 0 1 0 0 0 2 2 2 0 0 3 2 1 0 1 0 0 0 16 1 1812.0145 A0A0C4DG07;O60934 A0A0C4DG07 344 359 NBN Nibrin yes no 3 0.00040655 88.108 By MS/MS By MS/MS 1 1 8233500 3685700 4547700 1359 202 1458 3182;3183 2686;2687 2687 291 2 IPSEMPSPNFGK DTSLIHGKIPSEMPSP MPSPNFGKNIYRKQSG K I P G K N 0 0 1 0 0 0 1 1 0 1 0 1 1 1 3 2 0 0 0 0 0 0 12 0 1302.6278 Q9H2J7 Q9H2J7 681 692 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 3.6788E-11 131.66 By MS/MS By MS/MS 2 2 10712000 4822300 5889400 1360 1998 1459;1460 3184;3185;3186;3187 2688;2689;2690 2690 288 2855 3 IPSIVSSPLNSPLDR SPLADAKRIPSIVSSP PLNSPLDRSGIDITDF R I P D R S 0 1 1 1 0 0 0 0 0 2 2 0 0 0 3 4 0 0 0 1 0 0 15 0 1593.8726 P49790 P49790 328 342 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.015088 52.576 By MS/MS By MS/MS 2 2 6519000 2977300 3541800 1361 1383 1461 3188;3189;3190;3191 2691;2692;2693 2693 1853;1854;1855 3 IPSPNILK SPNPRSVRIPSPNILK IPSPNILKTGLTENVD R I P L K T 0 0 1 0 0 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 0 0 8 0 880.5382 Q5VUA4 Q5VUA4 2099 2106 ZNF318 Zinc finger protein 318 yes yes 2 0.018254 77.192 By MS/MS By matching 1 1 2676500 1227900 1448700 1362 1649 1462 3192;3193 2694 2694 2305 1 IPTYNTPLK CISEWEQKIPTYNTPL PTYNTPLKVTSIARRR K I P L K V 0 0 1 0 0 0 0 0 0 1 1 1 0 0 2 0 2 0 1 0 0 0 9 0 1045.5808 H7BYN4;Q02241 H7BYN4 733 741 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 2 0.012373 58.596 By matching By MS/MS 1 1 1109900 519230 590710 1363 943 1463 3194;3195 2695 2695 4205 1 IPVEGPLSPSRGDFPK GNNPIFPRIPVEGPLS PSRGDFPKGIPPQMGP R I P P K G 0 1 0 1 0 0 1 2 0 1 1 1 0 1 4 2 0 0 0 1 0 0 16 1 1694.8992 O00512 O00512 680 695 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 0.010496 60.968 By MS/MS By matching 1 1 4833500 2476200 2357300 1364 1087 1464 3196;3197 2696 2696 1427 1 IQDPTEDAEAEDTPR KKRNHTKRIQDPTEDA AEAEDTPRKRLRTDKH R I Q P R K 2 1 0 3 0 1 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 0 15 0 1685.738 H0Y9L4;O96028 H0Y9L4 126 140 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2 0.012261 61.495 By matching By MS/MS 1 1 3708000 1859400 1848700 1365 859 1465 3198;3199 2697 2697 3516 1 IQELGDLYTPAPGR IRSEQRPRIQELGDLY LYTPAPGRAESGPEKP R I Q G R A 1 1 0 1 0 1 1 2 0 1 2 0 0 0 2 0 1 0 1 0 0 0 14 0 1528.7886 M0R2P8;M0R3A4;M0QYA2;Q9NWS0 M0R2P8 68 81 PIH1D1 PIH1 domain-containing protein 1 yes no 2 0.0012621 70.488 By MS/MS By MS/MS 1 1 1507100 759770 747290 1366 1062 1466 3200;3201 2698;2699 2699 4220 2 IQEQESSGEEDSDLSPEER EGLEPKYRIQEQESSG SDLSPEEREKKRQFEM R I Q E R E 0 1 0 2 0 2 6 1 0 1 1 0 0 0 1 4 0 0 0 0 0 0 19 0 2162.9087 E7EMN6;G1AUC5;Q6NXS1;P41236 E7EMN6 90 108 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 yes no 2 0.015705 57.034 By matching By MS/MS 1 1 1400000 454310 945660 1367 560 1467 3202;3203 2700 2700 740;741 0 IQEVSGSCNLPAAIR LRRAWTYRIQEVSGSC CNLPAAIRPSCCKEVE R I Q I R P 2 1 1 0 1 1 1 1 0 2 1 0 0 0 1 2 0 0 0 1 0 0 15 0 1613.8195 F8VWI0 F8VWI0 51 65 CCL25 yes yes 2 0.005783 61.353 By MS/MS 1 556790 556790 0 1368 744 1468 3204 2701 2701 1 IQIISTDSAVASPQR ________________ SAVASPQRIQGSEPAS R I Q Q R I 2 1 0 1 0 2 0 0 0 3 0 0 0 0 1 3 1 0 0 1 0 0 15 0 1584.8471 C9JKS0;P49116;C9J2Y1;C9JMI6 C9JKS0 8 22 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.0028251 65.704 By MS/MS 1 0 0 0 1369 468 1469 3205 2702 2702 3372 1 IQLVEEELDR ________________ LVEEELDRAQERLATA R I Q D R A 0 1 0 1 0 1 3 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 10 0 1242.6456 H0YL80;D6R904;K7EP68;H0YKX5;H0YKP3;K7ERG3;K7ENT6;H0YNC7;A0A087WWU8;Q5HYB6;F5H7S3;H7BYY1;H0YK48;H0YL52;B7Z596;Q5TCU3;CON__Q3SX28;J3KN67;Q5TCU8;Q6ZN40;P67936;P09493;P07951;P06753 H0YL80 5 14 TPM1;TPM3;TPM4;DKFZp686J1372;TPM2 Tropomyosin alpha-4 chain;Tropomyosin alpha-1 chain;Tropomyosin beta chain;Tropomyosin alpha-3 chain yes no 2 0.0077775 78.113 By MS/MS By matching 1 1 904040 435000 469040 + 1370 68 1470 3206;3207 2703 2703 1 IQPAGNTSPR VASTPASRIQPAGNTS PAGNTSPRAISRVDRE R I Q P R A 1 1 1 0 0 1 0 1 0 1 0 0 0 0 2 1 1 0 0 0 0 0 10 0 1039.5411 H0Y5S9;H0Y682;P49674 H0Y5S9 59 68 CSNK1E Casein kinase I isoform epsilon yes no 2 0.0062314 97.813 By MS/MS By MS/MS 1 2 16318000 5880500 10438000 1371 834 1471 3208;3209;3210 2704;2705 2704 1123;3509 2 IQPLEPDSPTGLSENPTPATEK PPPPPLPKIQPLEPDS NPTPATEKLFVPQESD K I Q E K L 1 0 1 1 0 1 3 1 0 1 2 1 0 0 5 2 3 0 0 0 0 0 22 0 2320.1434 Q9ULJ3 Q9ULJ3 996 1017 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 3 0.0091796 53.188 By matching By MS/MS 1 1 9663400 4638700 5024700 1372 2119 1472 3211;3212 2706 2706 3958 1 IQQFDDGGSDEEDIWEEK FEACCKERIQQFDDGG EEDIWEEKHIAFTPES R I Q E K H 0 0 0 4 0 2 4 2 0 2 0 1 0 1 0 1 0 1 0 0 0 0 18 0 2138.8916 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 316 333 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 3 0.0028208 58.712 By MS/MS By MS/MS 1 1 6211300 3148100 3063100 1373 655 1473 3213;3214 2707;2708 2707 890 2 IQQQFSDLKR KYRMERPKIQQQFSDL QQFSDLKRKLAEVTEE K I Q K R K 0 1 0 1 0 3 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 1 1261.6779 O94906 O94906 138 147 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.0073865 84.31 By matching By MS/MS 1 1 6936100 3361600 3574500 1374 1178 1474 3215;3216 2709 2709 1573 1 IQSETKNLKATR EDMVLVSRIQSETKNL TKNLKATRNESFHSHN R I Q T R N 1 1 1 0 0 1 1 0 0 1 1 2 0 0 0 1 2 0 0 0 0 0 12 2 1387.7783 Q96M83 Q96M83 655 666 CCDC7 Coiled-coil domain-containing protein 7 yes yes 2 0.012074 49.06 By matching By MS/MS 1 1 1696600 486620 1210000 1375 1910 1475 3217;3218 2710 2710 266 3891;3892 1 IREEYPDR MGTLLISKIREEYPDR IREEYPDRIMNTFSVV K I R D R I 0 2 0 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 8 1 1076.5251 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371;A0A075B736;Q5SQY0;CON__ENSEMBL:ENSBTAP00000025008;Q3ZCM7;A6NNZ2;Q9H4B7 Q5JP53 137 144 TUBB;TUBB2B;TUBB2A;TUBB4B;TUBB8;TUBB1 Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain yes no 3 0.0072462 78.264 By MS/MS By MS/MS 1 1 1446100 476690 969440 1376 1232 1476 3219;3220 2711;2712 2712 2 IRQSNKTNK TVITAAPRIRQSNKTN RQSNKTNKRIKAGDTA R I R N K R 0 1 2 0 0 1 0 0 0 1 0 2 0 0 0 1 1 0 0 0 0 0 9 2 1087.6098 Q6WRI0 Q6WRI0 2143 2151 IGSF10 Immunoglobulin superfamily member 10 yes yes 3 0.016907 42.599 By MS/MS 1 0 0 0 1377 1694 1477 3221 2713 2713 231 1 ISAGTYFTMKVSKTK TADLPVARISAGTYFT TMKVSKTKPPDAPIVV R I S T K P 1 0 0 0 0 0 0 1 0 1 0 3 1 1 0 2 3 0 1 1 0 0 15 2 1660.8858 Q86UN6 Q86UN6 131 145 AKAP14 A-kinase anchor protein 14 yes yes 2 0.021616 41.283 By MS/MS 1 0 0 0 1378 1725 1478 3222 2714 2714 254 2432;3836;3837 1 ISAMSKDTK VTREAPARISAMSKDT SAMSKDTKLIVVVRDP R I S T K L 1 0 0 1 0 0 0 0 0 1 0 2 1 0 0 2 1 0 0 0 0 0 9 1 979.50083 J3KSX5;Q9Y662;Q9Y663 J3KSX5 27 35 HS3ST3A1;HS3ST3B1 Sulfotransferase;Heparan sulfate glucosamine 3-O-sulfotransferase 3B1;Heparan sulfate glucosamine 3-O-sulfotransferase 3A1 yes no 2 0.021857 46.426 By MS/MS 1 0 0 0 1379 1021 1479 3223 2715 2715 1359;3564 1 ISAVKTNSSTYHHLHTFVNR FENIEVKRISAVKTNS HLHTFVNRETDTKRPD R I S N R E 1 1 2 0 0 0 0 0 3 1 1 1 0 1 0 3 3 0 1 2 0 0 20 1 2311.1822 Q9C0D2 Q9C0D2 183 202 CEP295 Centrosomal protein of 295 kDa yes yes 3 0.0031627 51.029 By MS/MS 1 4170700 0 4170700 1380 1986 1480 3224 2716 2716 286 2833;3921;4431 1 ISEGLPTPTK SPLKSPYKISEGLPTP EGLPTPTKMTPRSRIL K I S T K M 0 0 0 0 0 0 1 1 0 1 1 1 0 0 2 1 2 0 0 0 0 0 10 0 1041.5706 P06400 P06400 815 824 RB1 Retinoblastoma-associated protein yes yes 2 0.016131 79.492 By matching By MS/MS 1 1 2282000 942600 1339400 1381 1225 1481 3225;3226 2717 2717 3638;3639 1 ISEGLPTPTKMTPR SPLKSPYKISEGLPTP TPTKMTPRSRILVSIG K I S P R S 0 1 0 0 0 0 1 1 0 1 1 1 1 0 3 1 3 0 0 0 0 0 14 1 1526.8127 P06400 P06400 815 828 RB1 Retinoblastoma-associated protein yes yes 3 0.0094652 45.79 By MS/MS 1 641370 0 641370 1382 1225 1482 3227 2718 2718 146 3638;3639 1 ISESSSTSSEKK PVIEKMNKISESSSTS SSTSSEKK________ K I S K K - 0 0 0 0 0 0 2 0 0 1 0 2 0 0 0 6 1 0 0 0 0 0 12 1 1268.6096 A0A0D9SF26 A0A0D9SF26 27 38 SMIM18 yes yes 2 0.018126 46.457 By MS/MS By matching 1 1 1679000 820300 858650 1383 228 1483 3228;3229 2719 2719 328;329;330;331;3296 0 ISFVEEDVHPK PQRLKETRISFVEEDV VEEDVHPKWIPGAADD R I S P K W 0 0 0 1 0 0 2 0 1 1 0 1 0 1 1 1 0 0 0 2 0 0 11 0 1298.6507 Q8WYP5 Q8WYP5 1231 1241 AHCTF1 Protein ELYS yes yes 2 0.0060099 69.815 By MS/MS By MS/MS 1 1 2321900 891810 1430100 1384 1845 1484 3230;3231 2720;2721 2720 2596 2 ISFYQQIKR TEERLVERISFYQQIK SFYQQIKRNIGGKHAR R I S K R N 0 1 0 0 0 2 0 0 0 2 0 1 0 1 0 1 0 0 1 0 0 0 9 1 1181.6557 A0A0C4DGK3;G3V5X4;A0A0A0MRE3;Q8WXH0 A0A0C4DGK3 1512 1520 SYNE2 Nesprin-2 yes no 2 0.02233 43.308 By MS/MS 1 802040 802040 0 1385 137 1485 3232 2722 2722 185;4025 0 ISGLIYEETR ARRGGVKRISGLIYEE GLIYEETRGVLKVFLE R I S T R G 0 1 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1179.6136 P62805 P62805 47 56 HIST1H4A Histone H4 yes yes 2 0.0021096 103.55 By MS/MS By MS/MS 1 1 6104800 2926900 3177900 1386 1432 1486 3233;3234 2723;2724 2724 2 ISGSSKRSNEETDDYGK KSGSMKDRISGSSKRS EETDDYGKAQVAKSSS R I S G K A 0 1 1 2 0 0 2 2 0 1 0 2 0 0 0 4 1 0 1 0 0 0 17 2 1871.8497 J3QSD7;Q9NYV4 J3QSD7 147 163 CDK12 Cyclin-dependent kinase 12 yes no 2 0.020463 41.359 By MS/MS 1 0 0 0 1387 1030 1487 3235 2725 2725 1367;1368;3568;4214 1 ISLPSDFQHK LKLKDGHRISLPSDFQ LPSDFQHKITVQASPN R I S H K I 0 0 0 1 0 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 0 0 10 0 1170.6033 Q5TCX8;G3V4P9;G3V347;A0A087WW79;J3KPI6;P80192 Q5TCX8 513 522 MLK4;MAP3K9 Mitogen-activated protein kinase kinase kinase MLK4;Mitogen-activated protein kinase kinase kinase 9 yes no 2 0.016528 59.367 By MS/MS By matching 1 1 2298000 1292400 1005600 1388 1636 1488 3236;3237 2726 2726 2276 1 ISNINEKYK FDMNNAWRISNINEKY SNINEKYKLCGSYPQE R I S Y K L 0 0 2 0 0 0 1 0 0 2 0 2 0 0 0 1 0 0 1 0 0 0 9 1 1107.5924 G5E953;Q13615 G5E953 42 50 MTMR3 Myotubularin-related protein 3 yes no 2 0.0064397 72.434 By matching By MS/MS 1 1 2142000 1061700 1080400 1389 807 1489 3238;3239 2727 2727 120 1071 1 ISNIPDEYFK TLYLDNNKISNIPDEY NIPDEYFKRFNALQYL K I S F K R 0 0 1 1 0 0 1 0 0 2 0 1 0 1 1 1 0 0 1 0 0 0 10 0 1224.6027 P51884;CON__Q05443 P51884 217 226 LUM Lumican yes no 2 0.014675 63.534 By MS/MS By matching 1 1 1743400 1061100 682340 1390 1397 1490 3240;3241 2728 2728 1 ISNLSPEEEQGLWK RHSSSHHKISNLSPEE EEEQGLWKQSHKSSAT K I S W K Q 0 0 1 0 0 1 3 1 0 1 2 1 0 0 1 2 0 1 0 0 0 0 14 0 1628.8046 F5GX09;Q5HYJ3 F5GX09 189 202 FAM76B Protein FAM76B yes no 2 0.00045384 75.911 By MS/MS 1 6396700 0 6396700 1391 699 1491 3242 2729 2729 936 1 ISSKSPGHMVILDQTK KKSEEKKRISSKSPGH MVILDQTKGDHCRPSR R I S T K G 0 0 0 1 0 1 0 1 1 2 1 2 1 0 1 3 1 0 0 1 0 0 16 1 1739.924 Q9NWH9 Q9NWH9 549 564 SLTM SAFB-like transcription modulator yes yes 3 0.010867 51.235 By MS/MS By MS/MS 2 2 13798000 7470700 6326900 1392 2064 1492;1493 3243;3244;3245;3246 2730;2731;2732 2732 299 2952;2953 3 ISSQFEKTRK SALGMMTRISSQFEKT SQFEKTRKVSGPRSLQ R I S R K V 0 1 0 0 0 1 1 0 0 1 0 2 0 1 0 2 1 0 0 0 0 0 10 2 1222.667 Q9NW08 Q9NW08 455 464 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.017974 41.876 By MS/MS 1 0 0 0 1393 2061 1494 3247 2733 2733 2946;3943 1 ISSTPTTETIR KSTRRSGRISSTPTTE TPTTETIRGIDSDDVQ R I S I R G 0 1 0 0 0 0 1 0 0 2 0 0 0 0 1 2 4 0 0 0 0 0 11 0 1204.6299 A0A075B754;Q96QE3 A0A075B754 600 610 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.0036018 79.036 By MS/MS By matching 1 1 1586500 765960 820530 1394 13 1495 3248;3249 2734 2734 11 1 ISTASQVSQGTGSPVPK STGSPTNKISTASQVS GTGSPVPKIHGSSFVT K I S P K I 1 0 0 0 0 2 0 2 0 1 0 1 0 0 2 4 2 0 0 2 0 0 17 0 1642.8526 Q9ULM3 Q9ULM3 524 540 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0016935 79.326 By matching By MS/MS 1 1 8382600 4169700 4212900 1395 2122 1496 3250;3251 2735 2735 3038 1 ISTSNVVQMKLTPR MCFKRPTRISTSNVVQ VQMKLTPRQTALAPLI R I S P R Q 0 1 1 0 0 1 0 0 0 1 1 1 1 0 1 2 2 0 0 2 0 0 14 1 1572.8658 P46934 P46934 41 54 NEDD4 E3 ubiquitin-protein ligase NEDD4 yes yes 2 0.020263 41.283 By MS/MS 1 0 0 0 1396 1368 1497 3252 2736 2736 190 1813;1814;3694 1 ISVYYNEATGGK DSDLQLDRISVYYNEA YNEATGGKYVPRAILV R I S G K Y 1 0 1 0 0 0 1 2 0 1 0 1 0 0 0 1 1 0 2 1 0 0 12 0 1300.6299 Q5JP53;P07437 Q5JP53 29 40 TUBB Tubulin beta chain yes no 2 0.0051281 84.17 By matching By MS/MS 1 1 1408200 440990 967170 1397 1232 1498 3253;3254 2737 2737 1 ISYIPDEEVSSPSPPQR QFENYSFKISYIPDEE SSPSPPQRAQRGDHSS K I S Q R A 0 1 0 1 0 1 2 0 0 2 0 0 0 0 4 4 0 0 1 1 0 0 17 0 1899.9214 F8W930;Q9Y6M1 F8W930 158 174 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 yes no 2 0.0013632 87.99 By MS/MS By MS/MS 1 1 6416300 3181200 3235100 1398 758 1499 3255;3256 2738;2739 2738 1011 2 ITEGVPQLLIVLTADR LVSSAGSRITEGVPQL LIVLTADRSGDDVRNP R I T D R S 1 1 0 1 0 1 1 1 0 2 3 0 0 0 1 0 2 0 0 2 0 0 16 0 1737.0036 E7ENL6;P12111 E7ENL6 521 536 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.00039088 91.858 By matching By MS/MS 1 1 8722200 5336900 3385300 1399 567 1500 3257;3258 2740 2740 1 ITFELVYEELLK VSVAPNAKITFELVYE LVYEELLKRRLGVYEL K I T L K R 0 0 0 0 0 0 3 0 0 1 3 1 0 1 0 0 1 0 1 1 0 0 12 0 1495.8174 H7C0L5;B7ZKJ8;Q14624 H7C0L5 10 21 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 1.6973E-14 133.81 By MS/MS By MS/MS 1 1 5783700 3633100 2150600 1400 415 1501 3259;3260 2741;2742 2742 2 ITGSPTLVK YQKRRSQKITGSPTLV TGSPTLVKNIPTSLGY K I T V K N 0 0 0 0 0 0 0 1 0 1 1 1 0 0 1 1 2 0 0 1 0 0 9 0 914.54368 A0A0U1RQE0;A8MUV4;A0A0U1RQR8;A0A0U1RQY3;A0A0U1RQM2;O15409;Q0PRL4 A0A0U1RQE0 568 576 FOXP2 Forkhead box protein P2 yes no 2 0.010506 72.848 By MS/MS By matching 1 1 1856200 996890 859270 1401 260 1502 3261;3262 2743 2743 374 1 ITLLSALVETR ASAATAVKITLLSALV LSALVETRTIVRFNRP K I T T R T 1 1 0 0 0 0 1 0 0 1 3 0 0 0 0 1 2 0 0 1 0 0 11 0 1214.7234 P01011;G3V3A0 P01011 380 390 SERPINA3 Alpha-1-antichymotrypsin;Alpha-1-antichymotrypsin His-Pro-less yes no 2 1.0467E-22 150.61 By MS/MS By matching 1 1 4372100 2473200 1899000 1402 1205 1503 3263;3264 2744 2744 1 ITPPAAKPGSPQAK SMVQKSPRITPPAAKP KPGSPQAKSLQPAVAE R I T A K S 3 0 0 0 0 1 0 1 0 1 0 2 0 0 4 1 1 0 0 0 0 0 14 1 1361.7667 A0A0A0MSW3;P35658 A0A0A0MSW3 98 111 NUP214 Nuclear pore complex protein Nup214 yes no 2 1.7976E-08 109.14 By MS/MS By MS/MS 1 1 9926000 5193800 4732100 1403 168 1504 3265;3266 2745;2746 2746 235 2 ITQQKIKYSR HVVFKDLRITQQKIKY QQKIKYSRGPFSLLEE R I T S R G 0 1 0 0 0 2 0 0 0 2 0 2 0 0 0 1 1 0 1 0 0 0 10 2 1263.7299 Q13315 Q13315 1576 1585 ATM Serine-protein kinase ATM yes yes 2 0.013276 44.847 By MS/MS 1 0 0 0 1404 1500 1505 3267 2747 2747 2055;4344 1 ITSFPESEGYSYETSTK YSYETTEKITSFPESE YSYETSTKTTRTPDTS K I T T K T 0 0 0 0 0 0 3 1 0 1 0 1 0 1 1 4 3 0 2 0 0 0 17 0 1924.8578 P46821 P46821 2014 2030 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.00016254 92.906 By MS/MS By matching 1 1 4490300 2247900 2242400 1405 1367 1506 3268;3269 2748 2748 4298 1 ITSPLMEPSSIEK VCLAVEKRITSPLMEP MEPSSIEKIVEIDAHI R I T E K I 0 0 0 0 0 0 2 0 0 2 1 1 1 0 2 3 1 0 0 0 0 0 13 0 1430.7327 P28066 P28066 54 66 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.010301 59.542 By MS/MS By matching 1 1 1841500 581270 1260200 1406 1317 1507 3270;3271 2749 2749 1735 1 ITVNGDSSAEAEELANEI PGYEEDMKITVNGDSS AEELANEI________ K I T E I - 3 0 2 1 0 0 4 1 0 2 1 0 0 0 0 2 1 0 0 1 0 0 18 0 1860.8589 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 848 865 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 2 0.006029 57.148 By matching By MS/MS 1 1 7388300 3519600 3868700 1407 193 1508 3272;3273 2750 2750 278;279 1 ITVQASPNLDK LPSDFQHKITVQASPN QASPNLDKRRSLNSSS K I T D K R 1 0 1 1 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 11 0 1184.6401 Q5TCX8 Q5TCX8 523 533 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 yes yes 2 0.0033687 80.17 By matching By MS/MS 1 1 2053700 949720 1103900 1408 1636 1509 3274;3275 2751 2751 2277 1 ITVQASPNLDKR LPSDFQHKITVQASPN ASPNLDKRRSLNSSSS K I T K R R 1 1 1 1 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 12 1 1340.7412 Q5TCX8 Q5TCX8 523 534 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 yes yes 2;3 0.0029097 84.297 By matching By MS/MS 1 2 2104800 990730 1114100 1409 1636 1510 3276;3277;3278 2752;2753 2752 2277 2 IVAHAVEVPAVQSPR RKPIVLKRIVAHAVEV VPAVQSPRRSPRISFF R I V P R R 3 1 0 0 0 1 1 0 1 1 0 0 0 0 2 1 0 0 0 4 0 0 15 0 1571.8784 B5MBX0;Q96FF9;H0YCL8 B5MBX0 63 77 CDCA5 Sororin yes no 2;3 4.0749E-11 113.52 By MS/MS By MS/MS 2 2 14597000 6974400 7622400 1410 389 1511 3279;3280;3281;3282 2754;2755;2756;2757;2758;2759;2760 2760 551 7 IVEVFDIGPK TVRSFISRIVEVFDIG EVFDIGPKRVQIALAQ R I V P K R 0 0 0 1 0 0 1 1 0 2 0 1 0 1 1 0 0 0 0 2 0 0 10 0 1115.6227 D6RGG3;Q99715;A0A087X0A8 D6RGG3 1225 1234 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.011816 66.27 By matching By MS/MS 1 1 619700 317930 301770 1411 538 1512 3283;3284 2761 2761 1 IVEYSPPSAPR ALPEPKVRIVEYSPPS YSPPSAPRRPPVYYKF R I V P R R 1 1 0 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 1 0 0 11 0 1214.6295 O95696 O95696 124 134 BRD1 Bromodomain-containing protein 1 yes yes 2 0.00087457 101.72 By MS/MS By MS/MS 1 1 5381000 2836800 2544200 1412 1197 1513 3285;3286 2762;2763;2764;2765 2763 1599 4 IVNVSPTKTVTSHMEQK ELKNPHAKIVNVSPTK VTSHMEQKDTNPIIFH K I V Q K D 0 0 1 0 0 1 1 0 1 1 0 2 1 0 1 2 3 0 0 3 0 0 17 1 1897.9931 Q5JVX6;Q5JVX7 Q5JVX7 259 275 C1orf141 Uncharacterized protein C1orf141 no no 3 0.019953 43.798 By MS/MS 1 0 0 0 1413 1610;1611 1514 3287 2766 2766 3787 1 IVPQSQVPNPESPGK QPIASSCKIVPQSQVP PNPESPGKSFQPITMS K I V G K S 0 0 1 0 0 2 1 1 0 1 0 1 0 0 4 2 0 0 0 2 0 0 15 0 1575.8257 Q9ULM3 Q9ULM3 436 450 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.00011697 83.54 By MS/MS By MS/MS 1 1 4350300 2200000 2150300 1414 2122 1515 3288;3289 2767;2768 2767 3039 2 IVRGDQPAASGDSDDDEPPPLPR LCIFLLYKIVRGDQPA DEPPPLPRLKRRDFTP K I V P R L 2 2 0 5 0 1 1 2 0 1 1 0 0 0 5 2 0 0 0 1 0 0 23 1 2403.1302 O00264 O00264 45 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 8.2713E-21 108.37 By MS/MS By MS/MS 1 1 13666000 6697800 6968600 1415 1080 1516 3290;3291 2769;2770;2771;2772 2770 1422 4 IVSAQSLAEDDVE KLPTISQRIVSAQSLA SLAEDDVE________ R I V V E - 2 0 0 2 0 1 2 0 0 1 1 0 0 0 0 2 0 0 0 2 0 0 13 0 1374.6515 Q15388 Q15388 133 145 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes yes 2 0.00064777 86.944 By MS/MS 1 2358000 0 2358000 1416 1554 1517 3292 2773 2773 2147 1 IVVVTAGVR YSVTANSKIVVVTAGV VVVTAGVRQQEGESRL K I V V R Q 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 4 0 0 9 0 912.57565 A8MW50;P07195;F5H793;C9J7H8 A8MW50 92 100 LDHB L-lactate dehydrogenase;L-lactate dehydrogenase B chain yes no 2 0.013657 81.191 By MS/MS By matching 1 1 815820 312520 503300 1417 340 1518 3293;3294 2774 2774 1 IWEERVSLTK EFQHKLVRIWEERVSL EERVSLTKLREKVTRE R I W T K L 0 1 0 0 0 0 2 0 0 1 1 1 0 0 0 1 1 1 0 1 0 0 10 1 1259.6874 Q96DD0 Q96DD0 42 51 LRRC39 Leucine-rich repeat-containing protein 39 yes yes 3 0.0052632 66.023 By MS/MS By MS/MS 1 1 8381500 3561700 4819700 1418 1883 1519 3295;3296 2775;2776 2775 2654 2 IWFQNRRSK GLTQTQVKIWFQNRRS WFQNRRSKFKKLYKNG K I W S K F 0 2 1 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 0 0 0 0 9 2 1233.6731 F8VXG1;O60479;Q07687 F8VXG1 55 63 DLX3;DLX2 Homeobox protein DLX-3;Homeobox protein DLX-2 yes no 2 0.022416 45.081 By MS/MS By matching 1 1 1018100 445690 572410 1419 748 1520 3297;3298 2777 2777 993 0 IWHHTFYNELR TNWDDMEKIWHHTFYN HTFYNELRVAPEEHPV K I W L R V 0 1 1 0 0 0 1 0 2 1 1 0 0 1 0 0 1 1 1 0 0 0 11 0 1514.7419 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8;P68133;P68032;Q6S8J3;C9JUM1;C9JZR7;A6NL76;A5A3E0;P0CG38;Q9BYX7;P0CG39 P63261 85 95 ACTG1;ACTB;ACTA1;ACTC1;POTEE;POTEF;POTEI;POTEKP;POTEJ Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J yes no 3 1.3334E-05 118.23 By MS/MS By MS/MS 1 1 3914000 2472400 1441500 1420 1422 1521 3299;3300 2778;2779 2778 2 IYEDGDDDMKR GLMNVLKKIYEDGDDD DGDDDMKRTINKAWVE K I Y K R T 0 1 0 4 0 0 1 1 0 1 0 1 1 0 0 0 0 0 1 0 0 0 11 1 1355.5663 Q9HB71 Q9HB71 198 208 CACYBP Calcyclin-binding protein yes yes 2 0.002596 82.287 By MS/MS 2 917540 0 917540 1421 2024 1522 3301;3302 2780;2781 2781 4438 2 IYEPLDVK ADPDEFERIYEPLDVK IYEPLDVKSKKIHVVD R I Y V K S 0 0 0 1 0 0 1 0 0 1 1 1 0 0 1 0 0 0 1 1 0 0 8 0 975.5277 P47712 P47712 534 541 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 2 0.0029721 98.997 By matching By MS/MS 1 1 1798100 706350 1091800 1422 1371 1523 3303;3304 2782 2782 4310 1 IYESIEEAK ARLADKNKIYESIEEA YESIEEAKSEAMKEME K I Y A K S 1 0 0 0 0 0 3 0 0 2 0 1 0 0 0 1 0 0 1 0 0 0 9 0 1080.5339 Q14DU5;E9PF63;O75116 Q14DU5 36 44 ROCK2 Rho-associated protein kinase 2 yes no 2 0.00067323 93.429 By MS/MS By MS/MS 1 1 1882300 956780 925540 1423 621 1524 3305;3306 2783;2784;2785 2783 4150 3 IYHLPDAESDEDEDFKEQTR EIEEHNIKIYHLPDAE EDFKEQTRLLKASIPF K I Y T R L 1 1 0 4 0 1 4 0 1 1 1 1 0 1 1 1 1 0 1 0 0 0 20 1 2436.0717 H7C2Y0;B5MCX3;Q15019 H7C2Y0 65 84 SEPT2 Septin-2 yes no 3 3.6379E-61 146.34 By MS/MS By MS/MS 1 1 418340000 169390000 248950000 1424 395 1525 3307;3308 2786;2787;2788 2787 554 3 IYIDCYEIIEK VVTSKSVKIYIDCYEI DCYEIIEKDIKEAGNI K I Y E K D 0 0 0 1 1 0 2 0 0 4 0 1 0 0 0 0 0 0 2 0 0 0 11 0 1457.7112 D6RGG3;Q99715;A0A087X0A8;H0Y5N9 D6RGG3 2662 2672 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.01062 65.305 By MS/MS By matching 1 1 959690 817280 142400 1425 538 1526 3309;3310 2789 2789 1 IYIDPFTYEDPNEAVR GHMTPGMKIYIDPFTY EDPNEAVREFAKEIDI K I Y V R E 1 1 1 2 0 0 2 0 0 2 0 0 0 1 2 0 1 0 2 1 0 0 16 0 1940.9156 B1AKC9;P54762;P29323 B1AKC9 590 605 EPHB2;EPHB1 Receptor protein-tyrosine kinase;Ephrin type-B receptor 1;Ephrin type-B receptor 2 yes no 2 0.00052494 81.709 By matching By MS/MS 1 1 3225900 1245200 1980700 1426 356 1527 3311;3312 2790 2790 4080;4081 1 IYLSDSLTGKFYNIGDQR LCNSLRYKIYLSDSLT FYNIGDQRGHGEDHCQ K I Y Q R G 0 1 1 2 0 1 0 2 0 2 2 1 0 1 0 2 1 0 2 0 0 0 18 1 2089.048 D3YTG3;Q7Z7G0;H0Y897 D3YTG3 1691 1708 ABI3BP Target of Nesh-SH3 yes no 2 0.0075881 51.218 By MS/MS By matching 2 1 139130000 99186000 39946000 1427 518 1528 3313;3314;3315 2791;2792 2791 74 706;3389 2 IYNISGNGSPLADSK RTPAAGERIYNISGNG GSPLADSKEIFLTVPV R I Y S K E 1 0 2 1 0 0 0 2 0 2 1 1 0 0 1 3 0 0 1 0 0 0 15 0 1534.7627 Q53HL2 Q53HL2 211 225 CDCA8 Borealin yes yes 2 0.00035074 75.968 By MS/MS By MS/MS 2 2 11447000 5184300 6262800 1428 1600 1529;1530 3316;3317;3318;3319 2793;2794 2793 216 2219 2 IYSFNSTNDSSGPANLDK PRVKQGPKIYSFNSTN SGPANLDKSILKVVIN K I Y D K S 1 0 3 2 0 0 0 1 0 1 1 1 0 1 1 4 1 0 1 0 0 0 18 0 1928.8752 A0A087WYN9;Q7Z478 A0A087WYN9 66 83 DHX29 ATP-dependent RNA helicase DHX29 yes no 2 0.013004 50.966 By MS/MS By matching 1 1 2271300 1094900 1176500 1429 84 1531 3320;3321 2795 2795 105 1 IYSYVVSRPQPR QVNTADHRIYSYVVSR VVSRPQPRGLLGWGYY R I Y P R G 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 2 0 0 2 2 0 0 12 1 1463.7885 Q96CS3 Q96CS3 78 89 FAF2 FAS-associated factor 2 yes yes 3 0.0058064 62.466 By matching By MS/MS 1 1 2379200 1281800 1097400 1430 1880 1532 3322;3323 2796;2797 2796 4417 2 IYVDDGLISLQVK KVVEVGSKIYVDDGLI GLISLQVKQKGADFLV K I Y V K Q 0 0 0 2 0 1 0 1 0 2 2 1 0 0 0 1 0 0 1 2 0 0 13 0 1461.8079 B4DNK4;P14618;H3BTN5;H3BQ34 B4DNK4 100 112 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 1.6963E-06 110.39 By MS/MS By matching 1 1 2846100 1611300 1234900 1431 376 1533 3324;3325 2798 2798 1 KAASPSPQSVR TPEPKKIKKAASPSPQ SPSPQSVRRVSSSRSV K K A V R R 2 1 0 0 0 1 0 0 0 0 0 1 0 0 2 3 0 0 0 1 0 0 11 1 1126.6095 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 744 754 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0046162 85.271 By MS/MS By MS/MS 1 1 13253000 6802800 6450200 1432 346 1534 3326;3327 2799;2800 2799 487 2 KAASTDLGAGETVVGK NRGRRQAKKAASTDLG AGETVVGKVLEITELP K K A G K V 3 0 0 1 0 0 1 3 0 0 1 2 0 0 0 1 2 0 0 2 0 0 16 1 1502.794 Q15032;H7C207 Q15032 970 985 R3HDM1 R3H domain-containing protein 1 yes no 2 3.9862E-06 99.813 By matching By MS/MS 1 1 8958300 4264200 4694100 1433 1536 1535 3328;3329 2801 2801 2117 1 KADIVFLLDGSINFR PPSRPEKKKADIVFLL LDGSINFRRDSFQEVL K K A F R R 1 1 1 2 0 0 0 1 0 2 2 1 0 2 0 1 0 0 0 1 0 0 15 1 1706.9356 E7ENL6;P12111 E7ENL6 1030 1044 COL6A3 Collagen alpha-3(VI) chain yes no 3 1.4532E-22 124.2 By MS/MS By MS/MS 1 1 7272800 4303500 2969400 1434 567 1536 3330;3331 2802;2803 2802 2 KADTTTPTPTAILAPGSPASPPGSLEPK AKKKGVKRKADTTTPT PPGSLEPKAARLPPMR R K A P K A 4 0 0 1 0 0 1 2 0 1 2 2 0 0 7 3 5 0 0 0 0 0 28 1 2701.4174 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;H0YDJ7;U3KPW0;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2 H0Y6K2 288 315 BRD2 Bromodomain-containing protein 2 yes no 3 0.00097586 52.465 By MS/MS 1 2534600 0 2534600 1435 244 1537 3332 2804;2805 2804 349 2 KAEDSDSEPEPEDNVR SPLGGIKRKAEDSDSE PEPEDNVRLWEAGWKQ R K A V R L 1 1 1 3 0 0 4 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 16 1 1815.7759 Q9H0D6 Q9H0D6 495 510 XRN2 5-3 exoribonuclease 2 yes yes 2;3 1.7408E-18 117.18 By MS/MS By MS/MS 3 3 33792000 14954000 18839000 1436 1989 1538;1539 3333;3334;3335;3336;3337;3338 2806;2807;2808;2809;2810;2811;2812;2813;2814;2815 2813 2840;2841 10 KAEGEPQEESPLK GSQEKQTKKAEGEPQE PQEESPLKSKSQEEPK K K A L K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 13 1 1440.7096 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 168 180 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 6.0548E-134 196.97 By MS/MS By MS/MS 2 2 32087000 15239000 16848000 1437 2073 1540 3339;3340;3341;3342 2816;2817;2818 2816 2966 2 KAEGEPQEESPLKSK GSQEKQTKKAEGEPQE EESPLKSKSQEEPKDT K K A S K S 1 0 0 0 0 1 4 1 0 0 1 3 0 0 2 2 0 0 0 0 0 0 15 2 1655.8366 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 168 182 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 1.8E-146 194.1 By MS/MS By MS/MS 2 2 144660000 76720000 67943000 1438 2073 1541 3343;3344;3345;3346 2819;2820;2821;2822;2823;2824 2820 2966 6 KAEPSEVDMNSPK PKAKQVKKKAEPSEVD EVDMNSPKSKKAKKKE K K A P K S 1 0 1 1 0 0 2 0 0 0 0 2 1 0 2 2 0 0 0 1 0 0 13 1 1430.6711 Q9NR30 Q9NR30 61 73 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.00067734 97.2 By MS/MS By MS/MS 2 2 15038000 8034000 7003600 1439 2045 1542;1543 3347;3348;3349;3350 2825;2826;2827 2826 296 2920 3 KAEQGSEEEGEGEEEEEEGGESKADDPYAHLSK KQGKEKAKKAEQGSEE DPYAHLSKKEKKKLKK K K A S K K 3 0 0 2 0 1 12 5 1 0 1 3 0 0 1 3 0 0 1 0 0 0 33 2 3578.4928 Q5STZ8;Q8NE71 Q5STZ8 224 256 ABCF1 ATP-binding cassette sub-family F member 1 yes no 4 9.2595E-10 75.942 By matching By MS/MS 1 1 24660000 13741000 10919000 1440 1618 1544 3351;3352 2828 2828 2248 1 KAESPVKEEAVAEVVTITK PKDVPEKKKAESPVKE AEVVTITKSVKVHLEK K K A T K S 3 0 0 0 0 0 4 0 0 1 0 3 0 0 1 1 2 0 0 4 0 0 19 2 2027.115 P07197;E7ESP9 P07197 733 751 NEFM Neurofilament medium polypeptide yes no 3 0.0091293 58.564 By MS/MS By MS/MS 1 1 3240600 1500600 1740000 1441 1229 1545 3353;3354 2829;2830 2829 1623 2 KALVVPEPEPDSDSNQER LGDLLTERKALVVPEP DSDSNQERKDDRERGE R K A E R K 1 1 1 2 0 1 3 0 0 0 1 1 0 0 3 2 0 0 0 2 0 0 18 1 2008.9702 Q5VTR2;C9J0A5;C9JXC9 Q5VTR2 125 142 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 3 0.0011668 64.327 By MS/MS By MS/MS 1 1 4854300 2884100 1970100 1442 1645 1546 3355;3356 2831;2832 2832 2299;2300 2 KAPAGPSLEETSVSSPK LSPPDWWKKAPAGPSL ETSVSSPKGSSEPCWL K K A P K G 2 0 0 0 0 0 2 1 0 0 1 2 0 0 3 4 1 0 0 1 0 0 17 1 1683.8679 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 476 492 HEATR6 HEAT repeat-containing protein 6 yes no 3 0.0060156 48.5 By MS/MS By MS/MS 1 1 2093900 1059000 1034900 1443 78 1547 3357;3358 2833;2834 2834 96;97;98 2 KAPAGQEEPGTPPSSPLSAEQLDR DAAAIPAKKAPAGQEE LSAEQLDRIQRNKAAA K K A D R I 3 1 0 1 0 2 3 2 0 0 2 1 0 0 5 3 1 0 0 0 0 0 24 1 2461.2085 P13051;Q68DM5;F5GYA2 P13051 50 73 UNG;DKFZp781L1143 Uracil-DNA glycosylase yes no 3 0.00019057 83.22 By MS/MS By MS/MS 2 3 30681000 13650000 17031000 1444 1267 1548;1549 3359;3360;3361;3362;3363 2835;2836;2837;2838 2838 1672;3653 4 KAPTNEFYA LGKKPIYKKAPTNEFY APTNEFYA________ K K A Y A - 2 0 1 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 9 1 1039.4975 P31431 P31431 190 198 SDC4 Syndecan-4 yes yes 2 0.017156 62.464 By MS/MS By matching 1 1 2068300 1047400 1021000 1445 1331 1550 3364;3365 2839 2839 4282 1 KAQLMQYLSLPK AKLDLKAKKAQLMQYL MQYLSLPKTPKMLKMS K K A P K T 1 0 0 0 0 2 0 0 0 0 3 2 1 0 1 1 0 0 1 0 0 0 12 1 1418.7956 Q6IC83 Q6IC83 57 68 C22orf42 Uncharacterized protein C22orf42 yes yes 2 0.01944 42.348 By MS/MS 1 0 0 0 1446 1667 1551 3366 2840 2840 2329;4376 1 KASEEIEDFR VKASKFRRKASEEIED SEEIEDFRLRPQSLNG R K A F R L 1 1 0 1 0 0 3 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 10 1 1222.583 Q96FT9 Q96FT9 76 85 IFT43 Intraflagellar transport protein 43 homolog yes yes 2 0.0059682 85.672 By MS/MS By MS/MS 1 1 6801900 2967900 3834000 1447 1891 1552 3367;3368 2841;2842 2842 2670 2 KASGPPVSELITK KSAGAAKRKASGPPVS PVSELITKAVAASKER R K A T K A 1 0 0 0 0 0 1 1 0 1 1 2 0 0 2 2 1 0 0 1 0 0 13 1 1325.7555 P16402;P16403;P10412 P10412 34 46 HIST1H1D;HIST1H1C;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.4 no no 2;3 0.0023799 62.438 By MS/MS By MS/MS 2 2 5297500 4089100 1208400 1448 1250;1277 1553 3369;3370;3371;3372 2843;2844 2843 1648 2 KASGSENEGDYNPGR KGRGAKKRKASGSENE EGDYNPGRKTSKTTSK R K A G R K 1 1 2 1 0 0 2 3 0 0 0 1 0 0 1 2 0 0 1 0 0 0 15 1 1579.6863 Q02880 Q02880 1548 1562 TOP2B DNA topoisomerase 2-beta yes yes 2 7.3521E-10 110.57 By MS/MS By MS/MS 4 4 13255000 6416000 6839200 1449 1456 1554;1555 3373;3374;3375;3376;3377;3378;3379;3380 2845;2846;2847;2848;2849 2847 1941;1942 4 KASGSENEGDYNPGRK KGRGAKKRKASGSENE GDYNPGRKTSKTTSKK R K A R K T 1 1 2 1 0 0 2 3 0 0 0 2 0 0 1 2 0 0 1 0 0 0 16 2 1707.7812 Q02880 Q02880 1548 1563 TOP2B DNA topoisomerase 2-beta yes yes 3 1.416E-20 120.74 By MS/MS By MS/MS 1 1 10849000 6119600 4729300 1450 1456 1556 3381;3382 2850;2851;2852;2853 2852 1941;1942 4 KASPEPEGEAAGK LAPTPRRRKASPEPEG PEGEAAGKMTTEEQQQ R K A G K M 3 0 0 0 0 0 3 2 0 0 0 2 0 0 2 1 0 0 0 0 0 0 13 1 1269.6201 Q8IU81 Q8IU81 382 394 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2 0.0012797 90.498 By MS/MS By MS/MS 1 1 6607400 3755700 2851700 1451 1747 1557 3383;3384 2854;2855;2856 2856 2460 3 KASPEPPDSAEGALK AAASLRKRKASPEPPD DSAEGALKLGEEQQRQ R K A L K L 3 0 0 1 0 0 2 1 0 0 1 2 0 0 3 2 0 0 0 0 0 0 15 1 1495.7518 Q9H1B7 Q9H1B7 545 559 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 2 0.0049208 67.846 By matching By MS/MS 1 1 15104000 6479100 8625000 1452 1991 1558 3385;3386 2857 2857 2844 1 KASQLVGIEK VHNSTQKRKASQLVGI SQLVGIEKKFHPDV__ R K A E K K 1 0 0 0 0 1 1 1 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1071.6288 Q9NPD8 Q9NPD8 182 191 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 2 0.00073003 111.31 By MS/MS By MS/MS 1 1 2737900 1552300 1185600 1453 2037 1559 3387;3388 2858;2859 2859 2912 2 KAVPMAPAPASPGSSNDSSAR SPCEFEHRKAVPMAPA SSNDSSARSQERAGGL R K A A R S 5 1 1 1 0 0 0 1 0 0 0 1 1 0 4 5 0 0 0 1 0 0 21 1 1996.9636 Q66K74 Q66K74 749 769 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3 0.00054037 68.916 By MS/MS By MS/MS 1 1 3886500 2025200 1861300 1454 1662 1560 3389;3390 2860;2861 2861 2323 2 KCSLPAEEDSVLEK ETVTGTGKKCSLPAEE EEDSVLEKLGERKPCN K K C E K L 1 0 0 1 1 0 3 0 0 0 2 2 0 0 1 2 0 0 0 1 0 0 14 1 1603.7763 E7EVA0;P27816 E7EVA0 651 664 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 6.3596E-05 82.709 By MS/MS By MS/MS 2 2 8476900 3814100 4662900 1455 596 1561 3391;3392;3393;3394 2862;2863;2864;2865;2866 2864 814 5 KDASSQDCYDIPR TVDLNKLRKDASSQDC QDCYDIPRAFPSDRSS R K D P R A 1 1 0 3 1 1 0 0 0 1 0 1 0 0 1 2 0 0 1 0 0 0 13 1 1553.678 B7Z3B9;Q13480 B7Z3B9 295 307 GAB1 GRB2-associated-binding protein 1 yes no 2 0.0055303 65.234 By MS/MS By MS/MS 1 2 2466100 1189500 1276600 1456 406 1562 3395;3396;3397 2867;2868 2867 4098 2 KDAVALCSMAK AVALQEERKDAVALCS VALCSMAKLFATDECF R K D A K L 3 0 0 1 1 0 0 0 0 0 1 2 1 0 0 1 0 0 0 1 0 0 11 1 1192.5944 Q9UKU7 Q9UKU7 345 355 ACAD8 Isobutyryl-CoA dehydrogenase, mitochondrial yes yes 2 0.017484 57.885 By MS/MS 1 5900000 0 5900000 1457 2113 1563 3398 2869 2869 305 3025 1 KDDDSDDESQSSHTGKK KKVKKKGRKDDDSDDE QSSHTGKKKPEISFMF R K D K K K 0 0 0 5 0 1 1 1 1 0 0 3 0 0 0 4 1 0 0 0 0 0 17 2 1877.7875 O94874 O94874 454 470 UFL1 E3 UFM1-protein ligase 1 yes yes 3 0.019857 50.956 By matching By MS/MS 1 1 442770 232620 210150 1458 1177 1564 3399;3400 2870 2870 1572 1 KDDSHSAEDSEDEKEDHK EDKDVKTKKDDSHSAE EDEKEDHKNVRQQRQA K K D H K N 1 0 0 5 0 0 4 0 2 0 0 3 0 0 0 3 0 0 0 0 0 0 18 2 2099.8516 Q9H1E3 Q9H1E3 70 87 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0064824 61.139 By MS/MS By MS/MS 1 1 5869500 2644700 3224800 1459 1992 1565 3401;3402 2871;2872 2871 2847 2 KDGSSPPLLEK RKTAVQDRKDGSSPPL SSPPLLEKQTVTKDVT R K D E K Q 0 0 0 1 0 0 1 1 0 0 2 2 0 0 2 2 0 0 0 0 0 0 11 1 1169.6292 H7BYY2;Q6W2J9 H7BYY2 419 429 BCOR BCL-6 corepressor yes no 2 0.0036075 87.719 By matching By MS/MS 1 1 3155100 1564700 1590300 1460 944 1566 3403;3404 2873 2873 1271;1272 1 KDNEESEQPPVPGTPTLR IDFGSLLKKDNEESEQ VPGTPTLRNRTFSESS K K D L R N 0 1 1 1 0 1 3 1 0 0 1 1 0 0 4 1 2 0 0 1 0 0 18 1 1992.9752 O15439 O15439 633 650 ABCC4 Multidrug resistance-associated protein 4 yes yes 3 0.00076084 69.975 By MS/MS By MS/MS 1 1 4417500 1959900 2457600 1461 1110 1567 3405;3406 2874;2875 2875 3601 2 KDPSGASNPSADSPLHR AKGGPESRKDPSGASN SADSPLHRGVHGKTGQ R K D H R G 2 1 1 2 0 0 0 1 1 0 1 1 0 0 3 4 0 0 0 0 0 0 17 1 1734.8285 P55317 P55317 295 311 FOXA1 Hepatocyte nuclear factor 3-alpha yes yes 3 0.0085275 46.368 By matching By MS/MS 1 1 1832700 1019000 813700 1462 1416 1568 3407;3408 2876 2876 1905 1 KDSEEEVSLLGSQDIEEGNHQVEDGCR RSGYTLIRKDSEEEVS HQVEDGCREMACEEFN R K D C R E 0 1 1 3 1 2 6 3 1 1 2 1 0 0 0 3 0 0 0 2 0 0 27 1 3058.3422 Q9Y487 Q9Y487 693 719 ATP6V0A2 V-type proton ATPase 116 kDa subunit a isoform 2 yes yes 3 0.0042484 44.711 By MS/MS By matching 1 1 8418600 3788200 4630400 1463 2158 1569 3409;3410 2877 2877 3137 1 KDSLSINLEFVK EPTSVTGRKDSLSINL SINLEFVKVSLSRIRR R K D V K V 0 0 1 1 0 0 1 0 0 1 2 2 0 1 0 2 0 0 0 1 0 0 12 1 1391.766 Q2LD37;H7C0Y8;H3BLT5;H0Y781 Q2LD37 4198 4209 KIAA1109 Uncharacterized protein KIAA1109 yes no 3 0.0099873 54.772 By MS/MS By MS/MS 1 1 0 0 0 1464 1580 1570 3411;3412 2878;2879 2878 2184 2 KDSLTQAQEQGNLLN MGVHHLHRKDSLTQAQ QEQGNLLN________ R K D L N - 1 0 2 1 0 3 1 1 0 0 3 1 0 0 0 1 1 0 0 0 0 0 15 1 1657.8271 Q5JTD0 Q5JTD0 543 557 TJAP1 Tight junction-associated protein 1 yes yes 2 0.00048786 78.441 By MS/MS By MS/MS 1 1 27695000 12721000 14974000 1465 1608 1571 3413;3414 2880;2881 2881 2235 2 KDSNELSDSAGEEDSADLKR RFVVKEEKKDSNELSD EDSADLKRAQKDKGLH K K D K R A 2 1 1 4 0 0 3 1 0 0 2 2 0 0 0 4 0 0 0 0 0 0 20 2 2164.972 Q9Y6X9 Q9Y6X9 771 790 MORC2 MORC family CW-type zinc finger protein 2 yes yes 3 0.020934 48.685 By MS/MS By matching 1 1 2421600 1081800 1339800 1466 2179 1572 3415;3416 2882 2882 3166 1 KDSQNSSQHSVSSHR PKSQPLERKDSQNSSQ QHSVSSHRSLHTASPS R K D H R S 0 1 1 1 0 2 0 0 2 0 0 1 0 0 0 6 0 0 0 1 0 0 15 1 1682.7721 A0A087WXD2;H7C5T8;H7C4U7;H7C535;A0A087WT53;Q96QZ7 A0A087WXD2 432 446 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 yes no 3 0.00010791 76.311 By MS/MS By MS/MS 1 1 2521700 1241900 1279800 1467 22 1573 3417;3418 2883;2884 2884 23 2 KDSSSEVFSDAAK SSEDSGSRKDSSSEVF EVFSDAAKEGWLHFRP R K D A K E 2 0 0 2 0 0 1 0 0 0 0 2 0 1 0 4 0 0 0 1 0 0 13 1 1369.6361 Q5T5U3;E7ESW5;F8W9U9;A0A1B0GV73;A0A1B0GTZ9 Q5T5U3 921 933 ARHGAP21 Rho GTPase-activating protein 21 yes no 2 0.0084259 72.175 By MS/MS By MS/MS 1 1 4936300 2509800 2426500 1468 1626 1574 3419;3420 2885;2886 2885 2262 0 KDSSSVVEWTQAPK SSSILYARKDSSSVVE VEWTQAPKERGHRGSE R K D P K E 1 0 0 1 0 1 1 0 0 0 0 2 0 0 1 3 1 1 0 2 0 0 14 1 1560.7784 F8WCB5;Q8TC07 F8WCB5 68 81 TBC1D15 TBC1 domain family member 15 yes no 2;3 0.00068825 87.138 By MS/MS By MS/MS 2 2 3384000 1731000 1653000 1469 766 1575 3421;3422;3423;3424 2887;2888;2889 2887 1023 3 KDYDTLSK IERSNVVRKDYDTLSK KDYDTLSKCSPKMPPA R K D S K C 0 0 0 2 0 0 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 8 1 968.48148 Q9UHR4 Q9UHR4 272 279 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 5.2712E-72 185.55 By MS/MS By MS/MS 1 1 2874100 1378200 1495800 1470 2099 1576 3425;3426 2890;2891 2891 4454 2 KEDLVFIFWAPESAPLK TYETKESKKEDLVFIF APESAPLKSKMIYASS K K E L K S 2 0 0 1 0 0 2 0 0 1 2 2 0 2 2 1 0 1 0 1 0 0 17 1 1989.0612 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;Q9Y281 E9PP50 96 112 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 3 1.1458E-13 107.62 By MS/MS By MS/MS 1 1 12978000 6271800 6706400 1471 675 1577 3427;3428 2892;2893 2893 2 KEEADYSAFGTDTLIK LLRIFIQKKEEADYSA FGTDTLIKKKNVLTNV K K E I K K 2 0 0 2 0 0 2 1 0 1 1 2 0 1 0 1 2 0 1 0 0 0 16 1 1786.8625 Q9BYG5 Q9BYG5 96 111 PARD6B Partitioning defective 6 homolog beta yes yes 2 0.017708 54.7 By matching By MS/MS 1 1 2364200 1088900 1275300 1472 1978 1578 3429;3430 2894 2894 2812 0 KEEPSQNDISPK PKSKKAKKKEEPSQND SQNDISPKTKSLRKKK K K E P K T 0 0 1 1 0 1 2 0 0 1 0 2 0 0 2 2 0 0 0 0 0 0 12 1 1370.6678 Q9NR30 Q9NR30 80 91 DDX21 Nucleolar RNA helicase 2 yes yes 2 5.3621E-29 152.07 By MS/MS By MS/MS 1 3 2537300 1623900 913370 1473 2045 1579 3431;3432;3433;3434 2895;2896;2897;2898 2895 2921;2922 3 KEESPPPPK KPLPPTVKKEESPPPP EESPPPPKVVNPLIGL K K E P K V 0 0 0 0 0 0 2 0 0 0 0 2 0 0 4 1 0 0 0 0 0 0 9 1 1007.5288 E9PGM9;P78332 E9PGM9 756 764 RBM6 RNA-binding protein 6 yes no 2 8.1869E-05 86.772 By MS/MS 1 0 0 0 1474 634 1580 3435 2899 2899 859 1 KEGLCNLTLK K E L K 0 0 1 0 1 0 1 1 0 0 3 2 0 0 0 0 1 0 0 0 0 0 10 1 1174.638 REV__Q6N069 yes no 2 0.011506 65.465 By MS/MS By matching 1 1 8544100 5498000 3046100 + 1475 2185 1581 3436;3437 2900 2900 330 1 KEKELVTTVQSLQQK TQLICQKKKEKELVTT TVQSLQQKVERCLEDG K K E Q K V 0 0 0 0 0 3 2 0 0 0 2 3 0 0 0 1 2 0 0 2 0 0 15 2 1757.9887 Q5SZL2 Q5SZL2 572 586 CEP85L Centrosomal protein of 85 kDa-like yes yes 3 0.017635 47.201 By MS/MS By matching 1 1 1353900 772420 581460 1476 1621 1582 3438;3439 2901 2901 2252;3792 0 KEKTPELPEPSVK SPSPAPEKKEKTPELP ELPEPSVKVKEPSVQE K K E V K V 0 0 0 0 0 0 3 0 0 0 1 3 0 0 3 1 1 0 0 1 0 0 13 2 1480.8137 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 217 229 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.021145 58.116 By MS/MS 1 0 0 0 1477 346 1583 3440 2902 2902 3325 1 KELHNSPKTMNK FKRIKETKKELHNSPK NSPKTMNKTNQVYAAN K K E N K T 0 0 2 0 0 0 1 0 1 0 1 3 1 0 1 1 1 0 0 0 0 0 12 2 1425.7398 Q5T890 Q5T890 1022 1033 ERCC6L2 DNA excision repair protein ERCC-6-like 2 yes yes 3 0.011169 57.885 By MS/MS 1 419670 0 419670 1478 1632 1584 3441 2903 2903 234 3800 0 KELSPAGSISK AKKLKRMKKELSPAGS SPAGSISKNSPATLFE K K E S K N 1 0 0 0 0 0 1 1 0 1 1 2 0 0 1 3 0 0 0 0 0 0 11 1 1115.6186 O95453 O95453 616 626 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.0030523 96.756 By MS/MS By MS/MS 1 1 8293400 4287500 4006000 1479 1194 1585 3442;3443 2904;2905 2905 1594 2 KENPSPLFSIK PVDDKEQRKENPSPLF PSPLFSIKKTKQLRSE R K E I K K 0 0 1 0 0 0 1 0 0 1 1 2 0 1 2 2 0 0 0 0 0 0 11 1 1258.6921 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 810 820 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 0.015345 66.023 By MS/MS By matching 1 1 2027300 940030 1087300 1480 252 1586 3444;3445 2906 2906 366 1 KESIIKSEGELLER EKPSLPPRKESIIKSE SEGELLERERERQRTE R K E E R E 0 1 0 0 0 0 4 1 0 2 2 2 0 0 0 2 0 0 0 0 0 0 14 2 1629.8938 A1X283 A1X283 526 539 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 3 0.00041094 85.457 By MS/MS By MS/MS 1 1 2637700 1005300 1632500 1481 311 1587 3446;3447 2907;2908 2907 444 2 KESKGPIVPLNVADQK TATQPLLKKESKGPIV PLNVADQKLLEASTQF K K E Q K L 1 0 1 1 0 1 1 1 0 1 1 3 0 0 2 1 0 0 0 2 0 0 16 2 1721.9676 G3XAL9;P55011 G3XAL9 992 1007 SLC12A2 Solute carrier family 12 member 2 yes no 3 0.0062997 60.621 By MS/MS By matching 1 1 7699900 3702000 3997900 1482 804 1588 3448;3449 2909 2909 1068 1 KETESEAEDNLDDLEK PVAAPEPKKETESEAE DNLDDLEKHLREKALR K K E E K H 1 0 1 3 0 0 5 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 16 1 1863.8222 A9Z1X7;Q8IYB3 A9Z1X7 879 894 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 9.0687E-138 189.55 By MS/MS By MS/MS 3 3 118930000 59059000 59873000 1483 346 1589 3450;3451;3452;3453;3454;3455 2910;2911;2912;2913;2914 2913 491;3327 5 KETESEAEDNLDDLEKHLR PVAAPEPKKETESEAE DDLEKHLREKALRSMR K K E L R E 1 1 1 3 0 0 5 0 1 0 3 2 0 0 0 1 1 0 0 0 0 0 19 2 2270.0662 A9Z1X7;Q8IYB3 A9Z1X7 879 897 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 4 0.01317 50.255 By matching By MS/MS 1 1 1483800 941790 542020 1484 346 1590 3456;3457 2915 2915 491;3327 1 KETPPPLVPPAAR ________________ PLVPPAAREWNLPPNA R K E A R E 2 1 0 0 0 0 1 0 0 0 1 1 0 0 5 0 1 0 0 1 0 0 13 1 1371.7874 Q9BQA1 Q9BQA1 3 15 WDR77 Methylosome protein 50 yes yes 2;3 0.00010015 103.3 By MS/MS By MS/MS 2 2 30761000 14374000 16387000 1485 1951 1591 3458;3459;3460;3461 2916;2917;2918;2919;2920 2919 3908 5 KETQSPEQVK NSERITVKKETQSPEQ TQSPEQVKSEKLKDLF K K E V K S 0 0 0 0 0 2 2 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 1 1172.6037 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 492 501 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 2.0611E-51 168.82 By MS/MS By MS/MS 1 1 44757000 21230000 23527000 1486 2073 1592 3462;3463 2921;2922 2922 2969;3945 2 KETQSPEQVKSEK NSERITVKKETQSPEQ PEQVKSEKLKDLFDYS K K E E K L 0 0 0 0 0 2 3 0 0 0 0 3 0 0 1 2 1 0 0 1 0 0 13 2 1516.7733 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 492 504 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.00096826 77.204 By MS/MS By MS/MS 1 1 80188000 35853000 44334000 1487 2073 1593 3464;3465 2923;2924 2923 2969;3945 2 KEVIFSKQLNTTINVMK LLKEITKRKEVIFSKQ NTTINVMKRMAWEEIA R K E M K R 0 0 2 0 0 1 1 0 0 2 1 3 1 1 0 1 2 0 0 2 0 0 17 2 1992.1078 E9PKC8;E9PRK0;E9PLV2;Q8NCY6 E9PKC8 28 44 MSANTD4 Myb/SANT-like DNA-binding domain-containing protein 4 yes no 2 0.019752 41.48 By MS/MS 1 17263000 17263000 0 1488 653 1594 3466 2925 2925 99;100 1 KEVSPEVVR KREEIIIKKEVSPEVV EVSPEVVRSKLSPSPS K K E V R S 0 1 0 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 9 1 1041.5819 Q5T200;A0A087WX14 Q5T200 195 203 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.0035012 101.35 By matching By MS/MS 1 1 12951000 6340800 6610400 1489 1624 1595 3467;3468 2926 2926 2255 1 KFDGVEGPRTPK FDYQFGYRKFDGVEGP VEGPRTPKYMNNITYY R K F P K Y 0 1 0 1 0 0 1 2 0 0 0 2 0 1 2 0 1 0 0 1 0 0 12 2 1329.7041 A0A0B4J210;Q6PKG0;E5RH50;H0YAN4;H0YBW1 A0A0B4J210 367 378 LARP1 La-related protein 1 yes no 3 0.0034972 98.253 By matching By MS/MS 1 1 6570600 3069400 3501300 1490 194 1596 3469;3470 2927 2927 3287 1 KFLDTSHYSTAGSSSVR VTNLPTPRKFLDTSHY TAGSSSVREINLQDIK R K F V R E 1 1 0 1 0 0 0 1 1 0 1 1 0 1 0 5 2 0 1 1 0 0 17 1 1841.8908 Q96A65 Q96A65 240 256 EXOC4 Exocyst complex component 4 yes yes 3 0.0031378 52.019 By MS/MS By MS/MS 1 1 3082500 1564000 1518500 1491 1873 1597 3471;3472 2928;2929 2928 4413 2 KFQEQECPPSPEPTRK HELVRVIRKFQEQECP PSPEPTRKEKDKKGCH R K F R K E 0 1 0 0 1 2 3 0 0 0 0 2 0 1 4 1 1 0 0 0 0 0 16 2 1956.9364 P62070 P62070 177 192 RRAS2 Ras-related protein R-Ras2 yes yes 3 0.0011294 85.177 By MS/MS By MS/MS 1 1 16584000 7573900 9010100 1492 1425 1598 3473;3474 2930;2931 2930 1916 2 KFSENPHVYQR QSLQQSVRKFSENPHV ENPHVYQRHHLPPPGP R K F Q R H 0 1 1 0 0 1 1 0 1 0 0 1 0 1 1 1 0 0 1 1 0 0 11 1 1403.6946 O75319 O75319 266 276 DUSP11 RNA/RNP complex-1-interacting phosphatase yes yes 2 0.0091794 57.175 By MS/MS 1 0 0 0 1493 1155 1599 3475 2932 2932 1540;4249 1 KFSKEEPVSSGPEEAVGK RSGSKKKRKFSKEEPV GPEEAVGKSSSKKKKK R K F G K S 1 0 0 0 0 0 4 2 0 0 0 3 0 1 2 3 0 0 0 2 0 0 18 2 1903.9527 O00567 O00567 561 578 NOP56 Nucleolar protein 56 yes yes 3 0.0035658 79.143 By MS/MS By MS/MS 1 2 14391000 2836500 11554000 1494 1088 1600 3476;3477;3478 2933;2934 2934 1429;1430;1431 2 KGAGDGSDEEVDGK VVPRRMARKGAGDGSD SDEEVDGKADGAEAKP R K G G K A 1 0 0 3 0 0 2 4 0 0 0 2 0 0 0 1 0 0 0 1 0 0 14 1 1362.5899 P35579 P35579 1937 1950 MYH9 Myosin-9 yes yes 2 4.2682E-21 134.4 By MS/MS By MS/MS 1 2 8093600 4508800 3584800 1495 1340 1601 3479;3480;3481 2935;2936;2937 2935 1763 3 KGDMDELEK AQKHYKKRKGDMDELE GDMDELEKEMLSVEKA R K G E K E 0 0 0 2 0 0 2 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 9 1 1063.4856 G8JLG1;Q14683 G8JLG1 308 316 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 2 0.008704 66.682 By MS/MS By matching 1 1 5473600 2610900 2862700 1496 814 1602 3482;3483 2938 2938 100 1 KGDVEGSQSQDEGEGSGESER GKATLVMKKGDVEGSQ EGSGESERGSGSQSSV K K G E R G 0 1 0 2 0 2 5 5 0 0 0 1 0 0 0 4 0 0 0 1 0 0 21 1 2165.8945 Q9UQE7 Q9UQE7 1059 1079 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.00037348 86.701 By MS/MS By matching 1 1 3488000 2732800 755250 1497 2136 1603 3484;3485 2939 2939 3099 1 KGGEFDEFVNDDTDDDLPISK GGGGRRSKKGGEFDEF DDDLPISKKKKRRKGS K K G S K K 0 0 1 6 0 0 2 2 0 1 1 2 0 2 1 1 1 0 0 1 0 0 21 1 2355.039 Q6PD62 Q6PD62 913 933 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 3 0.0052879 47.822 By MS/MS 1 5247500 5247500 0 1498 1683 1604 3486 2940 2940 3817 1 KGLSGKQNNFER EIDATEDKKGLSGKQN GKQNNFERKAVYQRQV K K G E R K 0 1 2 0 0 1 1 2 0 0 1 2 0 1 0 1 0 0 0 0 0 0 12 2 1376.7161 A0A0A0MR18;Q9Y5R5 A0A0A0MR18 22 33 DMRT2 Doublesex- and mab-3-related transcription factor 2 yes no 2 0.015785 51.135 By MS/MS By matching 1 1 1202000 534340 667700 1499 131 1605 3487;3488 2941 2941 21 179 1 KGNSPNSEPPTPK RPPEADGKKGNSPNSE NSEPPTPKTAWAETSR K K G P K T 0 0 2 0 0 0 1 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 13 1 1351.6732 P48634 P48634 377 389 PRRC2A Protein PRRC2A yes yes 2 0.0011066 85.287 By MS/MS By MS/MS 1 2 5887900 2538400 3349500 1500 1373 1606 3489;3490;3491 2942;2943;2944;2945 2943 1826;1827 4 KGPGQPSSPQR ARGGGKGRKGPGQPSS GQPSSPQRLDRLSGLA R K G Q R L 0 1 0 0 0 2 0 2 0 0 0 1 0 0 3 2 0 0 0 0 0 0 11 1 1137.5891 O95400 O95400 188 198 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 2;3 1.0084E-06 143.55 By MS/MS By MS/MS 2 2 3448200 1268500 2179700 1501 1192 1607 3492;3493;3494;3495 2946;2947;2948 2946 1591;1592 3 KGQCLSGNFYVR DMAQLRFKKGQCLSGN LSGNFYVRGDGTRVYF K K G V R G 0 1 1 0 1 1 0 2 0 0 1 1 0 1 0 1 0 0 1 1 0 0 12 1 1427.698 H7C552;A0A087WW35;Q96IZ6;Q6P1Q9 H7C552 69 80 METTL2B;METTL2A Methyltransferase-like protein 2A;Methyltransferase-like protein 2B yes no 2 0.019027 45.137 By MS/MS 1 0 0 0 1502 59 1608 3496 2949 2949 78 1 KGSDDAPYSPTAR FKSRSKKRKGSDDAPY APYSPTARVGPSVPRQ R K G A R V 2 1 0 2 0 0 0 1 0 0 0 1 0 0 2 2 1 0 1 0 0 0 13 1 1363.6368 E7ET14;A0A087WW48;O75151 E7ET14 110 122 PHF2 Lysine-specific demethylase PHF2 yes no 2 3.81E-09 118.2 By MS/MS By matching 2 1 4137100 2802200 1334900 1503 61 1609;1610 3497;3498;3499 2950;2951 2950 80;81 2 KGSITEYTAAEEK PKTTEVIRKGSITEYT EYTAAEEKEDGRRWRM R K G E K E 2 0 0 0 0 0 3 1 0 1 0 2 0 0 0 1 2 0 1 0 0 0 13 1 1425.6987 J3KN59;Q12982 J3KN59 233 245 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 yes no 2 1.3978E-11 130.72 By MS/MS By matching 1 1 4743000 2107100 2635900 1504 996 1611 3500;3501 2952 2952 1332 1 KGSPCDTLASSTEKR ANPDSHKRKGSPCDTL LASSTEKRRREQENKY R K G K R R 1 1 0 1 1 0 1 1 0 0 1 2 0 0 1 3 2 0 0 0 0 0 15 2 1635.7886 Q15788 Q15788 20 34 NCOA1 Nuclear receptor coactivator 1 yes yes 3 0.00016678 86.453 By MS/MS By matching 1 1 1540400 689250 851160 1505 1569 1612 3502;3503 2953 2953 2167 1 KGSPTPGFSTR PTSAYPERKGSPTPGF PTPGFSTRRGSPTTGF R K G T R R 0 1 0 0 0 0 0 2 0 0 0 1 0 1 2 2 2 0 0 0 0 0 11 1 1133.5829 J3KPS2;Q6ZRV2 J3KPS2 606 616 FAM83H Protein FAM83H yes no 2 0.007696 77.776 By MS/MS By MS/MS 1 1 3503200 1763300 1739900 1506 1004 1613 3504;3505 2954;2955 2954 1340 2 KGSSGNASEVSVACLTER IPSIERSRKGSSGNAS SVACLTERIHQMEENQ R K G E R I 2 1 1 0 1 0 2 2 0 0 1 1 0 0 0 4 1 0 0 2 0 0 18 1 1850.8792 F8WAN1;Q69YQ0;C9J8U1 F8WAN1 382 399 SPECC1L-ADORA2A;SPECC1L Cytospin-A yes no 2;3 1.313E-15 110.1 By MS/MS By MS/MS 2 2 16260000 7240900 9019500 1507 761 1614 3506;3507;3508;3509 2956;2957;2958 2957 1014;1015 3 KGSSSSVCSVASSSDISLGSTK AAAGSSSRKGSSSSVC DISLGSTKTERRSEIV R K G T K T 1 0 0 1 1 0 0 2 0 1 1 2 0 0 0 10 1 0 0 2 0 0 22 1 2130.011 H0YJP0;A0A087X2H1;Q9ULT8 H0YJP0 809 830 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes no 3 0.00046326 81.884 By MS/MS By MS/MS 1 1 5135600 2601500 2534100 1508 118 1615 3510;3511 2959;2960 2959 154;155;156;157 2 KGTGLLSSDYR TPEAVTTRKGTGLLSS GLLSSDYRIINGKSGT R K G Y R I 0 1 0 1 0 0 0 2 0 0 2 1 0 0 0 2 1 0 1 0 0 0 11 1 1195.6197 C9J6P4;Q7Z2W4 C9J6P4 401 411 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0058286 68.132 By MS/MS By MS/MS 1 1 2987300 1734000 1253300 1509 446 1616 3512;3513 2961;2962 2962 4108 2 KHGLAHDEMKSPR DISPSTFRKHGLAHDE HDEMKSPREPGYKAEG R K H P R E 1 1 0 1 0 0 1 1 2 0 1 2 1 0 1 1 0 0 0 0 0 0 13 2 1504.7569 Q9Y2W1 Q9Y2W1 688 700 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3;4 0.0090745 64.89 By MS/MS By MS/MS 2 2 13571000 6154700 7416500 1510 2146 1617 3514;3515;3516;3517 2963;2964 2963 3118 2 KHNGVGGSPPK DEATGAVKKHNGVGGS GVGGSPPKSKLLFSNT K K H P K S 0 0 1 0 0 0 0 3 1 0 0 2 0 0 2 1 0 0 0 1 0 0 11 1 1076.5727 Q96ST3 Q96ST3 853 863 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.021462 49.483 By MS/MS 1 0 0 0 1511 1931 1618 3518 2965 2965 273 2732 1 KHSEEAEFTPPLK HKKKKKKRKHSEEAEF AEFTPPLKCSPKRKGK R K H L K C 1 0 0 0 0 0 3 0 1 0 1 2 0 1 2 1 1 0 0 0 0 0 13 1 1511.762 Q3B726 Q3B726 314 326 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 3 0.013151 46.156 By MS/MS By matching 1 1 1185400 585600 599840 1512 1582 1619 3519;3520 2966 2966 2186;3776 1 KHSEEAEFTPPLKCSPK HKKKKKKRKHSEEAEF PPLKCSPKRKGKSNFL R K H P K R 1 0 0 0 1 0 3 0 1 0 1 3 0 1 3 2 1 0 0 0 0 0 17 2 1983.9724 Q3B726 Q3B726 314 330 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 3 0.0020039 59.339 By MS/MS By MS/MS 1 2 4495800 1954400 2541400 1513 1582 1620 3521;3522;3523 2967;2968 2967 2186;2187;3776 2 KHSPSPPPPTPTESR ASANARKRKHSPSPPP PPTPTESRKKSGKKGQ R K H S R K 0 1 0 0 0 0 1 0 1 0 0 1 0 0 6 3 2 0 0 0 0 0 15 1 1613.8162 Q92922 Q92922 326 340 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2;3 7.6622E-76 171.04 By MS/MS By MS/MS 3 5 41343000 19816000 21528000 1514 1868 1621;1622 3524;3525;3526;3527;3528;3529;3530;3531 2969;2970;2971;2972;2973;2974;2975;2976;2977;2978;2979 2975 2636;2637;3877 11 KHSQTDLVSR KQPPPLMKKHSQTDLV SQTDLVSRLKTRKILG K K H S R L 0 1 0 1 0 1 0 0 1 0 1 1 0 0 0 2 1 0 0 1 0 0 10 1 1169.6153 E9PN66;E9PNB3;E9PKN9;E9PS55;E9PMY0;E9PMW4;E9PQ46;E9PIN5;E9PIK4;U3KQ32;E9PKZ4;E9PPM1;O14683 E9PN66 12 21 TP53I11 Tumor protein p53-inducible protein 11 yes no 3 3.6007E-05 113.52 By MS/MS By MS/MS 1 2 7663500 2819300 4844200 1515 639 1623 3532;3533;3534 2980;2981;2982;2983 2981 869;3441 4 KIDTHPSPSHSSTVK PEREQKRRKIDTHPSP PSHSSTVKVTAILPKV R K I V K V 0 0 0 1 0 0 0 0 2 1 0 2 0 0 2 4 2 0 0 1 0 0 15 1 1619.8267 H0Y7U4;A0A0C4DG98;Q8NI27;H7C477;H0Y594 H0Y7U4 179 193 THOC2 THO complex subunit 2 yes no 4 2.6793E-05 85.45 By MS/MS By MS/MS 1 1 5875800 3653500 2222200 1516 208 1624 3535;3536 2984;2985 2984 301 2 KIFSIYGHYPVVRAALR TEKAIKEKKIFSIYGH PVVRAALRRKGWVEKK K K I L R R 2 2 0 0 0 0 0 1 1 2 1 1 0 1 1 1 0 0 2 2 0 0 17 2 1989.1312 A0A1C7CYW9;A6PVC2 A0A1C7CYW9 56 72 TTLL8 Protein monoglycylase TTLL8 yes no 3 0.0068466 49.482 By matching By MS/MS 1 1 767980 176940 591050 1517 305 1625 3537;3538 2986 2986 436;4060 1 KIIATTLSK EFVRSTDRKIIATTLS IIATTLSKLKLELDFD R K I S K L 1 0 0 0 0 0 0 0 0 2 1 2 0 0 0 1 2 0 0 0 0 0 9 1 973.61718 Q99683 Q99683 1104 1112 MAP3K5 Mitogen-activated protein kinase kinase kinase 5 yes yes 2 0.013343 46.891 By MS/MS 1 0 0 0 1518 1942 1626 3539 2987 2987 2750;3904;3905 1 KIIETMPMTEK IAYVEEMKKIIETMPM ETMPMTEKVEELLRVI K K I E K V 0 0 0 0 0 0 2 0 0 2 0 2 2 0 1 0 2 0 0 0 0 0 11 1 1319.6829 X6RDD7;Q5T8E0;B7Z2R7;Q5T8D3 X6RDD7 90 100 ACBD5 Acyl-CoA-binding domain-containing protein 5 yes no 2 0.0081686 84.198 By MS/MS 1 1837500 1837500 0 1519 404 1627 3540 2988 2988 3350 1 KISQRVIHLFDEK TAFSNVGRKISQRVIH VIHLFDEKGNDLGNMH R K I E K G 0 1 0 1 0 1 1 0 1 2 1 2 0 1 0 1 0 0 0 1 0 0 13 2 1611.9097 Q9H2K0 Q9H2K0 81 93 MTIF3 Translation initiation factor IF-3, mitochondrial yes yes 2 0.0045291 70.399 By MS/MS 1 3326300 0 3326300 1520 1999 1628 3541 2989 2989 448 1 KITIADCGQLE SRNGKTSKKITIADCG IADCGQLE________ K K I L E - 1 0 0 1 1 1 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1246.6227 P62937 P62937 155 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.00064659 122.94 By MS/MS By MS/MS 1 1 10640000 4358500 6281300 1521 1435 1629 3542;3543 2990;2991 2991 2 KIYEDGDDDMKR EGLMNVLKKIYEDGDD DGDDDMKRTINKAWVE K K I K R T 0 1 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 1 0 0 0 12 2 1483.6613 Q9HB71 Q9HB71 197 208 CACYBP Calcyclin-binding protein yes yes 2;3 3.5501E-64 166.62 By MS/MS By MS/MS 1 4 11927000 3202800 8723900 1522 2024 1630;1631 3544;3545;3546;3547;3548 2992;2993;2994;2995;2996;2997 2993 293 4438 6 KKAEPSEVDMNSPK FPKAKQVKKKAEPSEV EVDMNSPKSKKAKKKE K K K P K S 1 0 1 1 0 0 2 0 0 0 0 3 1 0 2 2 0 0 0 1 0 0 14 2 1558.7661 Q9NR30 Q9NR30 60 73 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 0.00020557 77.137 By MS/MS By matching 2 2 14204000 7267000 6937100 1523 2045 1632;1633 3549;3550;3551;3552 2998;2999 2998 296 2920 1 KKEEPSQNDISPK SPKSKKAKKKEEPSQN SQNDISPKTKSLRKKK K K K P K T 0 0 1 1 0 1 2 0 0 1 0 3 0 0 2 2 0 0 0 0 0 0 13 2 1498.7627 Q9NR30 Q9NR30 79 91 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 2.0144E-39 159.12 By MS/MS By MS/MS 2 2 66387000 36561000 29826000 1524 2045 1634 3553;3554;3555;3556 3000;3001;3002;3003;3004;3005 3005 2921;2922 6 KKEPAITSQNSPEAR TEKDLDEKKKEPAITS SQNSPEAREESTSSGN K K K A R E 2 1 1 0 0 1 2 0 0 1 0 2 0 0 2 2 1 0 0 0 0 0 15 2 1654.8638 P23193;E5RIS7 P23193 90 104 TCEA1 Transcription elongation factor A protein 1 yes no 2;3 0.00016615 92.8 By MS/MS By MS/MS 2 2 65209000 28587000 36623000 1525 1307 1635 3557;3558;3559;3560 3006;3007;3008;3009;3010 3006 1717;1718 5 KKNDIYGED FDFEEMKRKKNDIYGE KNDIYGED________ R K K E D - 0 0 1 2 0 0 1 1 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1080.5088 P50395 P50395 437 445 GDI2 Rab GDP dissociation inhibitor beta yes yes 2 5.7546E-07 137.9 By MS/MS By MS/MS 2 2 21347000 14345000 7002200 1526 1388 1636;1637 3561;3562;3563;3564 3011;3012;3013;3014;3015;3016;3017 3012 198 4313 6 KKSPIINESR DKSKSKDRKKSPIINE SPIINESRSRDRGKKS R K K S R S 0 1 1 0 0 0 1 0 0 2 0 2 0 0 1 2 0 0 0 0 0 0 10 2 1170.6721 Q13523 Q13523 275 284 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 3 0.0025901 88.224 By MS/MS By MS/MS 1 1 9516000 5266300 4249700 1527 1505 1638 3565;3566 3018;3019 3018 2061 2 KLATPPAAQESSR LDLRGHKRKLATPPAA PAAQESSRRRSRKGHL R K L S R R 3 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 1 0 0 0 0 0 13 1 1354.7205 H0Y760;Q9Y4B4 H0Y760 1086 1098 RAD54L2 Helicase ARIP4 yes no 3 9.5928E-06 103.39 By MS/MS By MS/MS 1 1 2401700 1222900 1178900 1528 843 1639 3567;3568 3020;3021 3021 3510 2 KLAVASVTEILK MLTPYVARKLAVASVT ASVTEILKMLNSNTES R K L L K M 2 0 0 0 0 0 1 0 0 1 2 2 0 0 0 1 1 0 0 2 0 0 12 1 1270.786 O75165 O75165 1620 1631 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 2 0.011172 74.611 By MS/MS By matching 1 1 4825300 2296900 2528400 1529 1154 1640 3569;3570 3022 3022 1539;3619 1 KLEKEEEEGISQESSEEEQ RKPRGRPKKLEKEEEE QESSEEEQ________ K K L E Q - 0 0 0 0 0 2 9 1 0 1 1 2 0 0 0 3 0 0 0 0 0 0 19 2 2235.9867 P17096 P17096 89 107 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2;3 8.7724E-40 137.27 By MS/MS By MS/MS 2 2 193970000 85947000 108020000 1530 1281 1641 3571;3572;3573;3574 3023;3024;3025;3026;3027;3028;3029;3030 3025 1679;1680 8 KLELDGEKETAPEEPGSPAK YKKEVERKKLELDGEK EEPGSPAKSAPASPVQ K K L A K S 2 0 0 1 0 0 5 2 0 0 2 3 0 0 3 1 1 0 0 0 0 0 20 2 2124.0586 P35612 P35612 576 595 ADD2 Beta-adducin yes yes 3 0.0044837 84.125 By matching By MS/MS 1 1 9419600 4427000 4992700 1531 1342 1642 3575;3576 3031 3031 1766 1 KLGAGEGGEASVSPEK TPRSKKKKKLGAGEGG EASVSPEKTSTTSKGK K K L E K T 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 2 0 0 0 1 0 0 16 1 1514.7577 J3KQ96;E7ETY2;Q13428 J3KQ96 1328 1343 TCOF1 Treacle protein yes no 2 0.0020026 76.574 By MS/MS By matching 1 1 3092300 1331300 1761000 1532 591 1643 3577;3578 3032 3032 794 1 KLGAGEGGEASVSPEKTSTTSK TPRSKKKKKLGAGEGG EKTSTTSKGKAKRDKA K K L S K G 2 0 0 0 0 0 3 4 0 0 1 3 0 0 1 4 3 0 0 1 0 0 22 2 2120.0597 J3KQ96;E7ETY2;Q13428 J3KQ96 1328 1349 TCOF1 Treacle protein yes no 3 7.598E-26 116.99 By MS/MS By MS/MS 1 1 34794000 17664000 17130000 1533 591 1644 3579;3580 3033;3034 3033 794 2 KLMFKTEGPDSD GQSTSRHKKLMFKTEG KTEGPDSD________ K K L S D - 0 0 0 2 0 0 1 1 0 0 1 2 1 1 1 1 1 0 0 0 0 0 12 2 1366.6439 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 223 234 TP53 Cellular tumor antigen p53 yes no 2 4.7399E-14 138.31 By MS/MS By MS/MS 2 2 22557000 10900000 11657000 1534 93 1645;1646 3581;3582;3583;3584 3035;3036;3037 3035 13 117 3 KLQDVSMKFR SQIDVAQKKLQDVSMK QDVSMKFRLFQKPANF K K L F R L 0 1 0 1 0 1 0 0 0 0 1 2 1 1 0 1 0 0 0 1 0 0 10 2 1250.6805 A0A087WV90;E9PDN5;A0A087WTU7;A0A075B6G3;P11532 A0A087WV90 1446 1455 DMD Dystrophin yes no 2 0.017582 43.808 By MS/MS 1 313100 0 313100 1535 4 1647 3585 3038 3038 1 2 0 KLSDVSYHQVDLERELEHK AKLEEALRKLSDVSYH LERELEHKDVLLAHCM R K L H K D 0 1 0 2 0 1 3 0 2 0 3 2 0 0 0 2 0 0 1 2 0 0 19 2 2324.1761 Q155Q3 Q155Q3 447 465 DIXDC1 Dixin yes yes 3 0.0065519 47.568 By MS/MS By matching 1 1 11434000 9155900 2278000 1536 1560 1648 3586;3587 3039 3039 421 1 KLSEADNR AVSKEVTRKLSEADNR KLSEADNRKMSRKEKD R K L N R K 1 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 1 931.47231 C9JA28;Q9UNL2;C9J365 C9JA28 103 110 SSR3 Translocon-associated protein subunit gamma yes no 2 0.0018042 84.507 By MS/MS 1 0 0 0 1537 452 1649 3588 3040 3040 643 1 KLSELERPHK DHRQKKHRKLSELERP SELERPHKVSHGHERR R K L H K V 0 1 0 0 0 0 2 0 1 0 2 2 0 0 1 1 0 0 0 0 0 0 10 2 1235.6986 A0A024RAC6;Q14241 A0A024RAC6 135 144 TCEB3 Transcription elongation factor B polypeptide 3 yes no 3 0.0095112 73.951 By MS/MS 1 945780 0 945780 1538 2 1650 3589 3041 3041 0 1 KLSGDQPAAR KGWESRKRKLSGDQPA SGDQPAARTPRSKKKK R K L A R T 2 1 0 1 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 1 1041.5567 J3KQ96;E7ETY2;Q13428 J3KQ96 1310 1319 TCOF1 Treacle protein yes no 2;3 0.0088685 74.78 By MS/MS By MS/MS 2 2 80507000 38959000 41547000 1539 591 1651 3590;3591;3592;3593 3042;3043;3044;3045;3046;3047 3047 795 6 KLSNPDIFSSTGK GVSPLLFRKLSNPDIF DIFSSTGKVKLQRQLS R K L G K V 0 0 1 1 0 0 0 1 0 1 1 2 0 1 1 3 1 0 0 0 0 0 13 1 1392.7249 Q6P0Q8 Q6P0Q8 72 84 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 2 0.0006388 97.45 By matching By MS/MS 1 1 3641400 1249800 2391600 1540 1675 1652 3594;3595 3048 3048 2343 1 KLSPIIEDSR YSQTLSIKKLSPIIED SPIIEDSREATHSSGF K K L S R E 0 1 0 1 0 0 1 0 0 2 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1156.6452 O60566 O60566 668 677 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 2 0.0039582 90.759 By MS/MS By MS/MS 1 1 4296500 2132400 2164100 1541 1140 1653 3596;3597 3049;3050 3049 1517 2 KLSRSPSPR KKPRSPKRKLSRSPSP LSRSPSPRRHKKEKKK R K L P R R 0 2 0 0 0 0 0 0 0 0 1 1 0 0 2 3 0 0 0 0 0 0 9 2 1026.5934 Q5T757;Q05519;Q5T760 Q5T757 304 312 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.0050176 68.033 By MS/MS By MS/MS 1 1 24761000 12619000 12142000 1542 1464 1654 3598;3599 3051;3052 3051 1969;1970;1971 2 KLSSSDAPAQDTGSSAAAVETDASR KVAGKVTRKLSSSDAP AVETDASRTGAQQKMR R K L S R T 6 1 0 3 0 1 1 1 0 0 1 1 0 0 1 6 2 0 0 1 0 0 25 1 2421.1256 Q7Z4S6;H0YHT2;A0A1B0GV47;H0YIM6 Q7Z4S6 851 875 KIF21A Kinesin-like protein KIF21A yes no 3 2.021E-06 90.694 By MS/MS By MS/MS 1 1 51370000 23791000 27579000 1543 1714 1655 3600;3601 3053;3054 3054 2399;2400;2401 2 KLSSSSEPYEEDEFNDDQSIKK AGGGPRKRKLSSSSEP NDDQSIKKTRLDHGEE R K L K K T 0 0 1 3 0 1 4 0 0 1 1 3 0 1 1 5 0 0 1 0 0 0 22 2 2574.1609 Q9H4L7;D6RAY8 Q9H4L7 209 230 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 0.0084008 57.339 By matching By MS/MS 1 1 14019000 6752900 7265600 1544 2007 1656 3602;3603 3055 3055 2868;2869 1 KLSVPTSDEEDEVPAPKPR KELMERLKKLSVPTSD EVPAPKPRGGKKTKGG K K L P R G 1 1 0 2 0 0 3 0 0 0 1 2 0 0 4 2 1 0 0 2 0 0 19 2 2093.0641 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 104 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 3.7625E-23 117.55 By MS/MS By MS/MS 1 2 20596000 8754100 11842000 1545 1618 1657 3604;3605;3606 3056;3057;3058 3057 2249;3790 3 KLTELENELNTK SNKVKASRKLTELENE LENELNTK________ R K L T K - 0 0 2 0 0 0 3 0 0 0 3 2 0 0 0 0 2 0 0 0 0 0 12 1 1430.7617 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y8U8;H0Y948 A8MQ02 1770 1781 MLLT4 Afadin yes no 2 0.0048412 82.515 By MS/MS By matching 1 1 2560600 1272100 1288500 1546 338 1658 3607;3608 3059 3059 3324 1 KLTSDEEGEPSGK AQRLLKAKKLTSDEEG EEGEPSGKRKAEDDDK K K L G K R 0 0 0 1 0 0 3 2 0 0 1 2 0 0 1 2 1 0 0 0 0 0 13 1 1375.6467 Q8WVC0 Q8WVC0 627 639 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 5.6271E-09 115.68 By MS/MS By MS/MS 2 1 4312500 2635400 1677100 1547 1836 1659 3609;3610;3611 3060;3061;3062 3062 2583 3 KMDLTVNGEQLDLDPGQTLIYYVDEK GESLFHSKKMDLTVNG LIYYVDEKAPEFSMQG K K M E K A 0 0 1 4 0 2 2 2 0 1 4 2 1 0 1 0 2 0 2 2 0 0 26 1 2996.4689 B5MCA4;P16422 B5MCA4 258 283 EPCAM Epithelial cell adhesion molecule yes no 3 0.011738 47.38 By matching By MS/MS 1 1 4040600 1961200 2079400 1548 392 1660 3612;3613 3063 3063 1 KMLGEDSDEEEEMDTSER QQQILLEKKMLGEDSD EEMDTSERKINAGSQD K K M E R K 0 1 0 3 0 0 6 1 0 0 1 1 2 0 0 2 1 0 0 0 0 0 18 1 2128.8413 H7C256;A0A087WWF4;A0A087X0M4;Q9BWU0 H7C256 68 85 SLC4A1AP Kanadaptin yes no 3 0.00040524 85.805 By MS/MS By MS/MS 2 2 11037000 5504800 5532500 1549 62 1661;1662 3614;3615;3616;3617 3064;3065;3066;3067;3068 3064 11 82 5 KMSGGSTMSSGGGNTNNSNSK QPSKRRKRKMSGGSTM NTNNSNSKKKSPASTF R K M S K K 0 0 4 0 0 0 0 5 0 0 0 2 2 0 0 6 2 0 0 0 0 0 21 1 2001.848 Q86U70 Q86U70 300 320 LDB1 LIM domain-binding protein 1 yes yes 3 0.0085061 41.292 By MS/MS 1 743800 0 743800 1550 1723 1663 3618 3069 3069 253 2430 1 KNIGKFQEEANIYAVK GNKRIRYKKNIGKFQE EANIYAVKTAVSVTQG K K N V K T 2 0 2 0 0 1 2 1 0 2 0 3 0 1 0 0 0 0 1 1 0 0 16 2 1850.989 P40425 P40425 304 319 PBX2 Pre-B-cell leukemia transcription factor 2 yes yes 3 0.021042 45.825 By MS/MS 1 620110 620110 0 1551 1349 1664 3619 3070 3070 4289 1 KNLEATYGTVR MTASQQSRKNLEATYG EATYGTVRTGNRTLFE R K N V R T 1 1 1 0 0 0 1 1 0 0 1 1 0 0 0 0 2 0 1 1 0 0 11 1 1250.6619 E7ESJ3;Q9UPS8 E7ESJ3 339 349 ANKRD26 Ankyrin repeat domain-containing protein 26 yes no 2 0.0059034 93.556 By MS/MS By matching 1 1 3121500 1679300 1442200 1552 585 1665 3620;3621 3071 3071 3419 1 KNPSVVIKPEACSPQFGK SVSHVSPRKNPSVVIK ACSPQFGKTSFPTKES R K N G K T 1 0 1 0 1 1 1 1 0 1 0 3 0 1 3 2 0 0 0 2 0 0 18 2 1985.0404 A0A0U1RRM7;A0A0U1RQW3;Q8WXE1 A0A0U1RRM7 134 151 ATRIP ATR-interacting protein yes no 3 0.0032348 71.781 By MS/MS By matching 1 1 2731000 1770800 960210 1553 269 1666 3622;3623 3072 3072 382 1 KNQKPSQVNGAPGSPTEPAGQK AKSPKLQKKNQKPSQV PTEPAGQKQHQKALPK K K N Q K Q 2 0 2 0 0 3 1 3 0 0 0 3 0 0 4 2 1 0 0 1 0 0 22 2 2219.1295 Q9BQG0;I3L1L3 Q9BQG0 1254 1275 MYBBP1A Myb-binding protein 1A yes no 3 0.0015602 80.733 By MS/MS By MS/MS 4 4 27972000 16274000 11698000 1554 1952 1667;1668 3624;3625;3626;3627;3628;3629;3630;3631 3073;3074;3075;3076;3077;3078 3073 281;445 2767;3911 6 KNSLRVEGDNIYVR HLQLIEGKKNSLRVEG EGDNIYVRHSNLMLEE K K N V R H 0 2 2 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 1 2 0 0 14 2 1661.8849 O43491;H0Y5B0 O43491 612 625 EPB41L2 Band 4.1-like protein 2 yes no 3 0.00012099 90.259 By MS/MS By MS/MS 1 1 33183000 12249000 20934000 1555 1125 1669 3632;3633 3079;3080 3080 1497;4240 2 KNTFTAWSDEESDYEIDDRDVNK EMEQMDGRKNTFTAWS IDDRDVNKILIVTQTP R K N N K I 1 1 2 5 0 0 3 0 0 1 0 2 0 1 0 2 2 1 1 1 0 0 23 2 2776.21 A0A0B4J210;Q6PKG0;E5RH50 A0A0B4J210 620 642 LARP1 La-related protein 1 yes no 3 0.0017301 57.484 By MS/MS By matching 1 1 11971000 5088600 6882500 1556 194 1670 3634;3635 3081 3081 280;4032 1 KPAQEETEETSSQESAEED WPQQVVQKKPAQEETE SQESAEED________ K K P E D - 2 0 0 1 0 2 7 0 0 0 0 1 0 0 1 3 2 0 0 0 0 0 19 1 2122.8662 P52926 P52926 91 109 HMGA2 High mobility group protein HMGI-C yes yes 2 0.013814 56.286 By matching By MS/MS 1 1 6041700 2518500 3523200 1557 1401 1671 3636;3637 3082 3082 1887 1 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR RQVEPPAKKPATPAED DKEAAQLREERLRQYA K K P L R E 4 1 1 8 0 1 6 1 0 1 2 2 0 1 2 1 1 0 0 0 0 0 32 2 3576.55 E9PL71;E9PQ49;E9PI39;E9PQZ1;E9PK01;A0A087X1X7;E9PRY8;P29692;H0YE72 E9PL71 120 151 EEF1D Elongation factor 1-delta yes no 3;4 8.2302E-116 147.64 By MS/MS By MS/MS 2 2 218190000 55917000 162270000 1558 112 1672 3638;3639;3640;3641 3083;3084;3085 3085 145 3 KPATSSKPR ESIYKAARKPATSSKP PATSSKPRRASLGPAY R K P P R R 1 1 0 0 0 0 0 0 0 0 0 2 0 0 2 2 1 0 0 0 0 0 9 2 970.55598 A0A075B715 A0A075B715 294 302 REC8 yes yes 2 0.019781 64.103 By MS/MS By matching 1 1 164100000 69526000 94570000 1559 10 1673 3642;3643 3086 3086 3205 1 KPEDVLDDDDAGSAPLK IFIYEKRRKPEDVLDD DAGSAPLKSSGQHQND R K P L K S 2 0 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 17 1 1783.8476 A0A087WUV8;P35613 A0A087WUV8 154 170 BSG Basigin yes no 3 0.00071301 70.358 By matching By MS/MS 1 1 1354900 574140 780710 1560 45 1674 3644;3645 3087 3087 60 1 KPESPYGNLCDAPDSPRPVK NVRKPTPRKPESPYGN PDSPRPVKASREDSGL R K P V K A 1 1 1 2 1 0 1 1 0 0 1 2 0 0 5 2 0 0 1 1 0 0 20 2 2226.0739 Q9UKA4 Q9UKA4 419 438 AKAP11 A-kinase anchor protein 11 yes yes 3 0.0057094 82.482 By MS/MS By matching 1 1 2495700 1483700 1011900 1561 2106 1675 3646;3647 3088 3088 3015 1 KPGPPLSPEIR PPVSPELRKPGPPLSP PPLSPEIRSPAGSPEL R K P I R S 0 1 0 0 0 0 1 1 0 1 1 1 0 0 4 1 0 0 0 0 0 0 11 1 1189.6819 Q96JM3 Q96JM3 421 431 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.012594 68.809 By matching By MS/MS 1 1 2500400 1370300 1130100 1562 1903 1676 3648;3649 3089 3089 2690 1 KPGPSGPSESPK KPVFPETRKPGPSGPS SGPSESPKAASDIWKP R K P P K A 0 0 0 0 0 0 1 2 0 0 0 2 0 0 4 3 0 0 0 0 0 0 12 1 1166.5932 Q96JM3 Q96JM3 498 509 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0027538 87.447 By MS/MS By MS/MS 1 1 7049100 2999600 4049500 1563 1903 1677 3650;3651 3090;3091 3090 2691 2 KPIETGSPK EKEKKEEKKPIETGSP PIETGSPKTKECSVEK K K P P K T 0 0 0 0 0 0 1 1 0 1 0 2 0 0 2 1 1 0 0 0 0 0 9 1 955.53385 Q5T757;Q05519 Q5T757 383 391 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.0051097 108.68 By MS/MS By MS/MS 1 1 52096000 23257000 28840000 1564 1464 1678 3652;3653 3092;3093;3094 3093 1972;3733 3 KPLVIIAEDVDGEALSTLVLNR LEIANAHRKPLVIIAE LSTLVLNRLKVGLQVV R K P N R L 2 1 1 2 0 0 2 1 0 2 4 1 0 0 1 1 1 0 0 3 0 0 22 1 2364.3264 P10809 P10809 269 290 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 2.5395E-37 126.51 By MS/MS By MS/MS 1 1 20000000 11456000 8543900 1565 1253 1679 3654;3655 3095;3096 3096 2 KPMTTKDLLK AVRRYLTRKPMTTKDL MTTKDLLKKFQTKKTG R K P L K K 0 0 0 1 0 0 0 0 0 0 2 3 1 0 1 0 2 0 0 0 0 0 10 2 1173.6791 M0QXD6;P35269 M0QXD6 382 391 GTF2F1 General transcription factor IIF subunit 1 yes no 3 0.010513 56.916 By MS/MS 1 495090 0 495090 1566 1056 1680 3656 3097 3097 123 3581;3582 0 KPPAPPSPVQSQSPSTNWSPAVPVK GSPEPAAKKPPAPPSP WSPAVPVKKAKSPTPS K K P V K K 2 0 1 0 0 2 0 0 0 0 0 2 0 0 8 5 1 1 0 3 0 0 25 1 2582.3493 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 772 796 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.014065 41.672 By MS/MS 1 2292100 0 2292100 1567 346 1681 3657 3098 3098 492;493 1 KPSDGSPDTKPSR LLPHAFSRKPSDGSPD SPDTKPSRLASKTKTS R K P S R L 0 1 0 2 0 0 0 1 0 0 0 2 0 0 3 3 1 0 0 0 0 0 13 2 1370.679 Q92733 Q92733 207 219 PRCC Proline-rich protein PRCC yes yes 3 0.00086585 86.213 By MS/MS By MS/MS 1 1 7052400 3530700 3521700 1568 1860 1682 3658;3659 3099;3100 3100 2627 2 KPSEDEVLNK AAITETQRKPSEDEVL SEDEVLNKGFKDTSQY R K P N K G 0 0 1 1 0 0 2 0 0 0 1 2 0 0 1 1 0 0 0 1 0 0 10 1 1157.5928 Q8NDI1 Q8NDI1 1056 1065 EHBP1 EH domain-binding protein 1 yes yes 2 0.00048726 96.948 By MS/MS By MS/MS 3 2 1777300 1121000 656240 1569 1799 1683 3660;3661;3662;3663;3664 3101;3102;3103;3104;3105;3106 3106 2528 5 KPSGSPDLWK PAGSPELRKPSGSPDL SGSPDLWKLSPDQRKT R K P W K L 0 0 0 1 0 0 0 1 0 0 1 2 0 0 2 2 0 1 0 0 0 0 10 1 1113.5819 Q96JM3 Q96JM3 441 450 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 1.3357E-05 127.56 By MS/MS By MS/MS 1 1 4919900 2385500 2534400 1570 1903 1684 3665;3666 3107;3108 3108 2692;2693 2 KPSHTSAVSIAGK TNGSGANRKPSHTSAV SAVSIAGKETLSSAAK R K P G K E 2 0 0 0 0 0 0 1 1 1 0 2 0 0 1 3 1 0 0 1 0 0 13 1 1281.7041 B5MBZ0;Q9HC35 B5MBZ0 92 104 EML4 Echinoderm microtubule-associated protein-like 4 yes no 3 0.014195 51.612 By MS/MS 1 0 0 0 1571 390 1685 3667 3109 3109 553 1 KPSIVTK SGSSRSKRKPSIVTKY RKPSIVTKYVESDDEK R K P T K Y 0 0 0 0 0 0 0 0 0 1 0 2 0 0 1 1 1 0 0 1 0 0 7 1 771.48544 P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100 82 88 ATRX Transcriptional regulator ATRX yes no 2 4.284E-05 109.44 By MS/MS 2 0 0 0 1572 1364 1686 3668;3669 3110;3111 3110 1797;3691 2 KPSPEPEGEVGPPK VARTARKRKPSPEPEG EGEVGPPKINGEAQPW R K P P K I 0 0 0 0 0 0 3 2 0 0 0 2 0 0 5 1 0 0 0 1 0 0 14 1 1446.7355 Q7Z5L9 Q7Z5L9 358 371 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 0.010958 62.861 By MS/MS By MS/MS 1 1 4160300 2329800 1830500 1573 1718 1687 3670;3671 3112;3113 3112 2414 1 KPSPQPSSPR QQPAQQPKKPSPQPSS SPQPSSPRQVKRAVVV K K P P R Q 0 1 0 0 0 1 0 0 0 0 0 1 0 0 4 3 0 0 0 0 0 0 10 1 1079.5724 G3V5E1;O75909 G3V5E1 322 331 CCNK Cyclin-K yes no 2 0.0066068 63.181 By MS/MS 1 2744000 0 2744000 1574 802 1688 3672 3114 3114 1063;1064 1 KPSVSEEVQATPNK IQSRKVERKPSVSEEV EVQATPNKAGPKLKDP R K P N K A 1 0 1 0 0 1 2 0 0 0 0 2 0 0 2 2 1 0 0 2 0 0 14 1 1512.7784 Q9UKJ3 Q9UKJ3 1105 1118 GPATCH8 G patch domain-containing protein 8 yes yes 2 1.1153E-08 110.22 By MS/MS By MS/MS 1 1 3221300 1866500 1354800 1575 2109 1689 3673;3674 3115;3116 3115 3020 2 KPTVTPTVNRENK AIQEEEKRKPTVTPTV PTVNRENKPTCYPKAE R K P N K P 0 1 2 0 0 0 1 0 0 0 0 2 0 0 2 0 3 0 0 2 0 0 13 2 1482.8154 P40818 P40818 733 745 USP8 Ubiquitin carboxyl-terminal hydrolase 8 yes yes 3 0.017798 47.039 By MS/MS 1 1048400 0 1048400 1576 1350 1690 3675 3117 3117 3682;3683 0 KPVTVSPTTPTSPTEGEAS AELDRITRKPVTVSPT SPTEGEAS________ R K P A S - 1 0 0 0 0 0 2 1 0 0 0 1 0 0 4 3 5 0 0 2 0 0 19 1 1884.9317 E9PHI6;Q9Y6G9 E9PHI6 389 407 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 1.0782E-83 161.08 By MS/MS By MS/MS 2 2 166770000 84061000 82711000 1577 635 1691;1692 3676;3677;3678;3679 3118;3119;3120;3121 3119 861;862;3437;3438 4 KQAREESEESEAEPVQR PGKASVSRKQAREESE SEAEPVQRTAKKVEGN R K Q Q R T 2 2 0 0 0 2 6 0 0 0 0 1 0 0 1 2 0 0 0 1 0 0 17 2 2000.9399 Q9BW71 Q9BW71 190 206 HIRIP3 HIRA-interacting protein 3 yes yes 3 0.020026 50.884 By MS/MS By matching 1 1 2682500 1564800 1117700 1578 1967 1693 3680;3681 3122 3122 2786 1 KQEGPATQVDSAVGTLPATSPQSTSVQAK SSRISDGKKQEGPATQ QSTSVQAKGTNKLRKP K K Q A K G 4 0 0 1 0 4 1 2 0 0 1 2 0 0 3 4 4 0 0 3 0 0 29 1 2882.4621 J3KQ96;E7ETY2 J3KQ96 1054 1082 TCOF1 yes no 3 0.00012661 58.294 By matching By MS/MS 1 1 13259000 5233500 8025900 1579 591 1694 3682;3683 3123 3123 796;3421 1 KQEGTPEGLYL SKENVLYKKQEGTPEG GTPEGLYL________ K K Q Y L - 0 0 0 0 0 1 2 2 0 0 2 1 0 0 1 0 1 0 1 0 0 0 11 1 1233.6241 P62191 P62191 430 440 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.0016192 93.178 By MS/MS By MS/MS 1 1 2725900 1356400 1369500 1580 1427 1695 3684;3685 3124;3125 3124 4324 2 KQQQEPTGEPSPK KRGRGRPRKQQQEPTG PTGEPSPKRPRGRPKG R K Q P K R 0 0 0 0 0 3 2 1 0 0 0 2 0 0 3 1 1 0 0 0 0 0 13 1 1452.7209 P52926;F5H2U8;F5H2A4;F5H6H0 P52926 34 46 HMGA2 High mobility group protein HMGI-C yes no 2;3 7.6273E-96 184.87 By MS/MS By MS/MS 2 2 35179000 18787000 16392000 1581 1401 1696 3686;3687;3688;3689 3126;3127;3128;3129;3130;3131;3132;3133;3134 3127 1888 9 KQSGSPTLDTAPNGR NFGKNIYRKQSGSPTL LDTAPNGRYGIGYLMA R K Q G R Y 1 1 1 1 0 1 0 2 0 0 1 1 0 0 2 2 2 0 0 0 0 0 15 1 1527.7641 Q9H2J7 Q9H2J7 697 711 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.019547 55.291 By MS/MS By matching 2 2 4995900 2292000 2703900 1582 1998 1697;1698 3690;3691;3692;3693 3135;3136 3135 291 2856;2857 2 KQSLGELIGTLNAAK GNWKMNGRKQSLGELI IGTLNAAKVPADTEVV R K Q A K V 2 0 1 0 0 1 1 2 0 1 3 2 0 0 0 1 1 0 0 0 0 0 15 1 1541.8777 P60174 P60174 56 70 TPI1 Triosephosphate isomerase yes yes 2;3 2.8986E-18 132.5 By MS/MS By MS/MS 2 2 15219000 7116000 8103100 1583 1420 1699 3694;3695;3696;3697 3137;3138;3139;3140 3139 1910 4 KQSSSEISLAVER DEAWRQRRKQSSSEIS EISLAVERARRRREEE R K Q E R A 1 1 0 0 0 1 2 0 0 1 1 1 0 0 0 4 0 0 0 1 0 0 13 1 1432.7522 P48634 P48634 454 466 PRRC2A Protein PRRC2A yes yes 3 0.012707 56.139 By MS/MS By matching 1 1 1438600 902820 535790 1584 1373 1700 3698;3699 3141 3141 1828;1829;1830 0 KRESESESDETPPAAPQLIK EAAKTAKRKRESESES PAAPQLIKKEKKKSKK R K R I K K 2 1 0 1 0 1 4 0 0 1 1 2 0 0 3 3 1 0 0 0 0 0 20 2 2211.1019 O60832 O60832 448 467 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 0.011903 55.864 By matching By MS/MS 1 1 13677000 6592700 7084200 1585 1148 1701 3700;3701 3142 3142 1530;1531;1532 1 KRLFTFQFNNLGNTDINYIK KGQLTGHKKRLFTFQF NTDINYIKDDTRHIRF K K R I K D 0 1 4 1 0 1 0 1 0 2 2 2 0 3 0 0 2 0 1 0 0 0 20 2 2445.2805 Q9Y4E8 Q9Y4E8 709 728 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 3 0.01497 40.626 By matching By MS/MS 1 1 43408000 8570600 34837000 1586 2159 1702 3702;3703 3143 3143 3979;3980 1 KRSEGFSMDR PVKVERTRKRSEGFSM SEGFSMDRKVEKKKEP R K R D R K 0 2 0 1 0 0 1 1 0 0 0 1 1 1 0 2 0 0 0 0 0 0 10 2 1211.5717 Q7Z4V5;K7ERA4 Q7Z4V5 452 461 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 3 0.0034128 86.803 By MS/MS By MS/MS 2 2 25935000 14531000 11403000 1587 1715 1703;1704 3704;3705;3706;3707 3144;3145;3146;3147 3147 251 2408 4 KRSPSPSPTPEAK KGGNYKKRKRSPSPSP PSPTPEAKKKNAKKGP R K R A K K 1 1 0 0 0 0 1 0 0 0 0 2 0 0 4 3 1 0 0 0 0 0 13 2 1380.7361 F8VXC8;Q8TAQ2 F8VXC8 300 312 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 1.9068E-11 128.74 By MS/MS By MS/MS 1 1 14474000 7712800 6761500 1588 747 1705 3708;3709 3148;3149;3150 3150 990;991 3 KRSSSEDAESLAPR PEVRTGKRKRSSSEDA DAESLAPRSKVKKIIQ R K R P R S 2 2 0 1 0 0 2 0 0 0 1 1 0 0 1 4 0 0 0 0 0 0 14 2 1531.759 H0YA82;Q4G0J3 H0YA82 77 90 LARP7 La-related protein 7 yes no 3 0.0051198 69.422 By MS/MS By matching 1 1 4231200 2052500 2178600 1589 861 1706 3710;3711 3151 3151 1155;1156;1157 1 KRSVAVSDEEEVEEEAER LSPATPSRKRSVAVSD EVEEEAERRKERCKRG R K R E R R 2 2 0 1 0 0 7 0 0 0 0 1 0 0 0 2 0 0 0 3 0 0 18 2 2089.9764 Q9Y6X9 Q9Y6X9 737 754 MORC2 MORC family CW-type zinc finger protein 2 yes yes 3 0.01522 53.504 By MS/MS By matching 1 1 9877800 4686400 5191400 1590 2179 1707 3712;3713 3152 3152 3167;3168 1 KRSVQEGENPDDGVR EGMSKRKRKRSVQEGE ENPDDGVRGSPPEDYR R K R V R G 0 2 1 2 0 1 2 2 0 0 0 1 0 0 1 1 0 0 0 2 0 0 15 2 1684.8129 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 15 29 RBM34 RNA-binding protein 34 yes no 3 1.2715E-05 98.654 By MS/MS By MS/MS 1 1 14187000 5451700 8735200 1591 316 1708 3714;3715 3153;3154 3154 452 2 KSASPEVSEGHENQHGQESEAK DEAWAFVRKSASPEVS HGQESEAKASKRLREP R K S A K A 2 0 1 0 0 2 5 2 2 0 0 2 0 0 1 4 0 0 0 1 0 0 22 1 2364.0578 O60930 O60930 73 94 RNASEH1 Ribonuclease H1 yes yes 4 0.0012187 57.045 By matching By MS/MS 1 1 13095000 4813100 8282100 1592 1150 1709 3716;3717 3155 3155 1534 1 KSASPTQSSVNR K S N R 1 1 1 0 0 1 0 0 0 0 0 1 0 0 1 4 1 0 0 1 0 0 12 1 1260.6422 REV__Q86T82 yes yes 3 0.019591 42.083 By MS/MS By matching 2 1 52464000 36230000 16234000 + 1593 2210 1710 3718;3719;3720 3156 3156 3197 1 KSEAGHASSPDSEVTSLCQK EVPEIFTKKSEAGHAS EVTSLCQKEKAELAPV K K S Q K E 2 0 0 1 1 1 2 1 1 0 1 2 0 0 1 5 1 0 0 1 0 0 20 1 2116.9695 Q6NZY4 Q6NZY4 590 609 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 3 0.004108 50.158 By MS/MS 1 1805500 0 1805500 1594 1674 1711 3721 3157 3157 2342 1 KSEPLDESDNDF TKPNRRVRKSEPLDES LDESDNDF________ R K S D F - 0 0 1 3 0 0 2 0 0 0 1 1 0 1 1 2 0 0 0 0 0 0 12 1 1394.5838 J3KNW5;Q96AJ1 J3KNW5 421 432 CLUAP1 Clusterin-associated protein 1 yes no 2 0.0065123 73.415 By MS/MS By matching 1 1 5014800 2654700 2360100 1595 1001 1712 3722;3723 3158 3158 1337 1 KSKLTEEVTK LVHLTLKKKSKLTEEV KLTEEVTKRLHDGEST K K S T K R 0 0 0 0 0 0 2 0 0 0 1 3 0 0 0 1 2 0 0 1 0 0 10 2 1161.6605 B9A012;A0A087WT71;Q13402;H7C4D8 B9A012 1119 1128 MYO7A Unconventional myosin-VIIa yes no 3 0.016755 47.915 By MS/MS By matching 1 1 4534600 2719500 1815200 1596 23 1713 3724;3725 3159 3159 3210;3211 0 KSLSDSESDDSK KEKDGTKRKSLSDSES DSESDDSKSKKKRDAA R K S S K S 0 0 0 3 0 0 1 0 0 0 1 2 0 0 0 5 0 0 0 0 0 0 12 1 1296.5681 Q13185;S4R2Y4 Q13185 92 103 CBX3 Chromobox protein homolog 3 yes no 2 1.2668E-11 133.23 By MS/MS By MS/MS 1 1 14321000 6518800 7802100 1597 1494 1714 3726;3727 3160;3161 3160 2041;2042 2 KSLSDSESDDSKSK KEKDGTKRKSLSDSES ESDDSKSKKKRDAADK R K S S K K 0 0 0 3 0 0 1 0 0 0 1 3 0 0 0 6 0 0 0 0 0 0 14 2 1511.6951 Q13185;S4R2Y4 Q13185 92 105 CBX3 Chromobox protein homolog 3 yes no 2 0.00069121 76.332 By MS/MS 1 1363000 1363000 0 1598 1494 1715 3728 3162 3162 2041;2042 1 KSNLDEEVNVIPPHTPVR FETQRTPRKSNLDEEV IPPHTPVRTVMNTIQQ R K S V R T 0 1 2 1 0 0 2 0 1 1 1 1 0 0 3 1 1 0 0 3 0 0 18 1 2043.0749 P06400 P06400 359 376 RB1 Retinoblastoma-associated protein yes yes 3 0.0034628 52.365 By matching By MS/MS 1 1 2713600 1025500 1688000 1599 1225 1716 3729;3730 3163 3163 3640 1 KSPSDTEGLVK SPVKQAPRKSPSDTEG SDTEGLVKSLPSGSHQ R K S V K S 0 0 0 1 0 0 1 1 0 0 1 2 0 0 1 2 1 0 0 1 0 0 11 1 1159.6085 O95297 O95297 218 228 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.0017996 101.45 By MS/MS 1 8222900 0 8222900 1600 1189 1717 3731 3164 3164 1586 1 KSPSGPVKSPPLSPVGTTPVK QNHDLTHRKSPSGPVK PVGTTPVKLKRAAPKE R K S V K L 0 0 0 0 0 0 0 2 0 0 1 3 0 0 6 4 2 0 0 3 0 0 21 2 2059.1677 C9J4K0;Q9BVC5 C9J4K0 139 159 C2orf49 Ashwin yes no 3 0.012361 44.047 By MS/MS By matching 1 1 20835000 9513100 11322000 1601 442 1718 3732;3733 3165 3165 636;637;3363 1 KSQTEKENTR KEVYRIPKKSQTEKEN QTEKENTRNQPE____ K K S T R N 0 1 1 0 0 1 2 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 10 2 1219.6157 H7C3H4 H7C3H4 1662 1671 SETD2 yes yes 2 0.015192 64.827 By MS/MS By matching 1 1 2275200 877260 1397900 1602 963 1719 3734;3735 3166 3166 3542;3543 0 KSSADTEFSDECTTAER SWRSNNSRKSSADTEF DECTTAERVLMKSPSP R K S E R V 2 1 0 2 1 0 3 0 0 0 0 1 0 1 0 3 3 0 0 0 0 0 17 1 1932.8007 Q9H6S0 Q9H6S0 1200 1216 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 3 3.5712E-14 107.51 By MS/MS By MS/MS 1 1 12064000 6917500 5146400 1603 2012 1720 3736;3737 3167;3168;3169 3168 2879;3930 3 KSSEASPTAQR LKTTVEERKSSEASPT EASPTAQRSKDHSKEC R K S Q R S 2 1 0 0 0 1 1 0 0 0 0 1 0 0 1 3 1 0 0 0 0 0 11 1 1160.5786 J3KNN7;Q7Z569 J3KNN7 62 72 BRAP BRCA1-associated protein yes no 2 0.019018 57.434 By MS/MS By matching 1 1 2523200 1350400 1172900 1604 998 1721 3738;3739 3170 3170 1334 0 KSSPEMEDAR EKQKPEVKKSSPEMED SPEMEDARVLSKKQPD K K S A R V 1 1 0 1 0 0 2 0 0 0 0 1 1 0 1 2 0 0 0 0 0 0 10 1 1148.5132 Q96T58 Q96T58 1004 1013 SPEN Msx2-interacting protein yes yes 2 0.017216 43.502 By MS/MS 1 0 0 0 1605 1934 1722 3740 3171 3171 282 2740 1 KSSPSVKPAVDPAAAK QLKLSITKKSSPSVKP AVDPAAAKLWTLSAND K K S A K L 4 0 0 1 0 0 0 0 0 0 0 3 0 0 3 3 0 0 0 2 0 0 16 2 1551.8621 H3BV90;Q6FI81;H3BPG7;H3BT65 H3BV90 181 196 CIAPIN1 Anamorsin yes no 3 0.018818 52.498 By MS/MS By MS/MS 1 1 9349900 4577200 4772700 1606 938 1723 3741;3742 3172;3173 3173 1261;1262 2 KTAHNSEADLEESFNEHELEPSSPK MVYCRKHKKTAHNSEA ELEPSSPKSKKKSRKG K K T P K S 2 0 2 1 0 0 6 0 2 0 2 2 0 1 2 4 1 0 0 0 0 0 25 1 2824.2788 Q8IWS0 Q8IWS0 133 157 PHF6 PHD finger protein 6 yes yes 4 4.5617E-05 73.153 By MS/MS By MS/MS 1 1 10964000 3276900 7686900 1607 1754 1724 3743;3744 3174;3175 3175 2469;2470 2 KTAPTLSPEHWK KSGPPELRKTAPTLSP TLSPEHWKAVPPVSPE R K T W K A 1 0 0 0 0 0 1 0 1 0 1 2 0 0 2 1 2 1 0 0 0 0 12 1 1393.7354 Q96JM3 Q96JM3 399 410 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.017079 43.798 By matching By MS/MS 1 1 6916000 3891100 3024900 1608 1903 1725 3745;3746 3176 3176 2694;3888 1 KTESPIKLSPATPSR VIKTPVVKKTESPIKL LSPATPSRKRSVAVSD K K T S R K 1 1 0 0 0 0 1 0 0 1 1 2 0 0 3 3 2 0 0 0 0 0 15 2 1610.8992 Q9Y6X9 Q9Y6X9 722 736 MORC2 MORC family CW-type zinc finger protein 2 yes yes 3 0.018492 62.739 By MS/MS 1 1390300 0 1390300 1609 2179 1726 3747 3177 3177 3988 1 KTGSYGALAEITASK ATWRLGLRKTGSYGAL LAEITASKEGQKEKDT R K T S K E 3 0 0 0 0 0 1 2 0 1 1 2 0 0 0 2 2 0 1 0 0 0 15 1 1495.7882 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 442 456 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2;3 0.0025816 66.023 By MS/MS By MS/MS 2 2 25846000 13162000 12684000 1610 1098 1727 3748;3749;3750;3751 3178;3179 3179 1462;4236 2 KTMLCLACGQSMR ________________ LACGQSMRTEKGLKQL R K T M R T 1 1 0 0 2 1 0 1 0 0 2 1 2 0 0 1 1 0 0 0 0 0 13 1 1554.7139 H0Y2Q8;H7C298;B6ZDN3;M0R2J8;Q6ZRR9 H0Y2Q8 6 18 DCDC1;DCDC5 Doublecortin domain-containing protein 5 yes no 2 0.019698 43.282 By MS/MS 1 0 0 0 1611 401 1728 3752 3180 3180 3349 1 KTNSNKDGDQHSPGR CTRSFSLRKTNSNKDG GDQHSPGRNQSSAFSP R K T G R N 0 1 2 2 0 1 0 2 1 0 0 2 0 0 1 2 1 0 0 0 0 0 15 2 1639.7663 Q6ZW33 Q6ZW33 316 330 MICALCL MICAL C-terminal-like protein yes yes 3 0.0024185 58.159 By MS/MS 1 1216100 0 1216100 1612 1699 1729 3753 3181 3181 233 2372 1 KTPLALAGSPTPK PPSSPLLKKTPLALAG LAGSPTPKNPEDKSPQ K K T P K N 2 0 0 0 0 0 0 1 0 0 2 2 0 0 3 1 2 0 0 0 0 0 13 1 1279.75 B9EGQ5;M0QXA7;O95785 B9EGQ5 169 181 WIZ Protein Wiz yes no 2 0.0037512 73.273 By MS/MS By matching 1 1 4530800 2439800 2091000 1613 423 1730 3754;3755 3182 3182 592;3357 1 KTPQGPPEIYSDTQFPSLQSTAK GARLTTTRKTPQGPPE PSLQSTAKHVESRKDK R K T A K H 1 0 0 1 0 3 1 1 0 1 1 2 0 1 4 3 3 0 1 0 0 0 23 1 2519.2544 Q9UKY7;D6R9V8;H0Y8K3;D6RFH2;D6RDN0 Q9UKY7 181 203 CDV3 Protein CDV3 homolog yes no 3 0.0041797 47.155 By MS/MS By MS/MS 1 1 61002000 26100000 34901000 1614 2116 1731 3756;3757 3183;3184 3183 4459 2 KTSASDVTNIYPGDAGK KKARDEGKKTSASDVT IYPGDAGKAGDQLVPD K K T G K A 2 0 1 2 0 0 0 2 0 1 0 2 0 0 1 2 2 0 1 1 0 0 17 1 1722.8424 Q15042 Q15042 535 551 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes yes 2 0.0047323 62.924 By matching By MS/MS 1 1 5337200 1974100 3363200 1615 1538 1732 3758;3759 3185 3185 2121 0 KTSAVSSPLLDQQR SSASKKDRKTSAVSSP SPLLDQQRNSKTNQSK R K T Q R N 1 1 0 1 0 2 0 0 0 0 2 1 0 0 1 3 1 0 0 1 0 0 14 1 1528.8209 Q5T200;A0A087WX14 Q5T200 236 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.01041 63.681 By MS/MS By matching 1 1 3046500 1467200 1579300 1616 1624 1733 3760;3761 3186 3186 2256 1 KTSDANETEDHLESLICK GGQPHKRRKTSDANET HLESLICKVGEKSACS R K T C K V 1 0 1 2 1 0 3 0 1 1 2 2 0 0 0 2 2 0 0 0 0 0 18 1 2088.9634 F2Z2T1;Q09161 F2Z2T1 20 37 NCBP1 Nuclear cap-binding protein subunit 1 yes no 3 0.0020214 56.424 By MS/MS By matching 1 1 42432000 19095000 23337000 1617 689 1734 3762;3763 3187 3187 926;3462 1 KTSPASLDFPESQK WKLSPDQRKTSPASLD LDFPESQKSSRGGSPD R K T Q K S 1 0 0 1 0 1 1 0 0 0 1 2 0 1 2 3 1 0 0 0 0 0 14 1 1533.7675 Q96JM3 Q96JM3 457 470 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.00072196 87.647 By MS/MS By matching 1 1 11337000 5605200 5732200 1618 1903 1735 3764;3765 3188 3188 2695 1 KTSQSEEEEAPR LDGAGKRRKTSQSEEE SEEEEAPRGHRGERPT R K T P R G 1 1 0 0 0 1 4 0 0 0 0 1 0 0 1 2 1 0 0 0 0 0 12 1 1389.6372 J3KSK6;Q7RTP6 J3KSK6 202 213 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes no 2 0.018023 61.423 By MS/MS By matching 1 1 2182800 1321700 861030 1619 1019 1736 3766;3767 3189 3189 1357 1 KTSSDDESEEDEDDLLQR AWAETTKRKTSSDDES DEDDLLQRTGNFISTS R K T Q R T 0 1 0 5 0 1 4 0 0 0 2 1 0 0 0 3 1 0 0 0 0 0 18 1 2109.8822 Q9Y5J1 Q9Y5J1 203 220 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 2 0.019147 46.159 By MS/MS 1 0 0 0 1620 2167 1737 3768 3190 3190 3146;3147 1 KTVTYEDPQAVGGLASALDNR GNSLAEQRKTVTYEDP LASALDNRKQSSEGTF R K T N R K 3 1 1 2 0 1 1 2 0 0 2 1 0 0 1 1 2 0 1 2 0 0 21 1 2204.1073 F5H3S6;B7Z2U2;Q6ZVM7 F5H3S6 252 272 TOM1L2 TOM1-like protein 2 yes no 3 0.00044724 85.969 By MS/MS By MS/MS 1 1 6035700 3027400 3008300 1621 405 1738 3769;3770 3191;3192 3192 3351;3352 2 KTYSKMNNPAIK HFSRSFQKKTYSKMNN KMNNPAIKRIGNHITK K K T I K R 1 0 2 0 0 0 0 0 0 1 0 3 1 0 1 1 1 0 1 0 0 0 12 2 1393.7388 Q5T5N3;P14735 Q5T5N3 23 34 IDE Insulin-degrading enzyme yes no 2 0.013686 46.001 By MS/MS 1 629880 0 629880 1622 1273 1739 3771 3193 3193 177;178 1677 1 KTYVGSLRNGVQSER DVMPVDKKKTYVGSLR RNGVQSERNM______ K K T E R N 0 2 1 0 0 1 1 2 0 0 1 1 0 0 0 2 1 0 1 2 0 0 15 2 1692.8907 J3QKP2 J3QKP2 27 41 CRISPLD2 yes yes 3 0.01363 43.764 By MS/MS 1 3554700 3554700 0 1623 1024 1740 3772 3194 3194 139 1362 1 KVAGAATPKK AGAAKKPKKVAGAATP AGAATPKKSIKKTPKK K K V K K S 3 0 0 0 0 0 0 1 0 0 0 3 0 0 1 0 1 0 0 1 0 0 10 2 969.59712 P16402 P16402 141 150 HIST1H1D Histone H1.3 yes yes 2 0.013618 62.338 By MS/MS By matching 1 1 1215000 799620 415430 1624 1277 1741 3773;3774 3195 3195 3659 1 KVEEEGSPGDPDHEASTQGR PHPLEGSRKVEEEGSP HEASTQGRTCGPEHSK R K V G R T 1 1 0 2 0 1 4 3 1 0 0 1 0 0 2 2 1 0 0 1 0 0 20 1 2123.9356 A0A0A0MRN5;Q9NZT2 A0A0A0MRN5 257 276 OGFR Opioid growth factor receptor yes no 3 0.00079625 70.02 By MS/MS 1 2373500 0 2373500 1625 148 1742 3775 3196 3196 201 1 KVEEEQEADEEDVSEEEAESK SESAQPLKKVEEEQEA SEEEAESKEGTNKDFP K K V S K E 2 0 0 2 0 1 10 0 0 0 0 2 0 0 0 2 0 0 0 2 0 0 21 1 2437.014 Q9H3N1 Q9H3N1 234 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 3 7.5814E-52 137.4 By MS/MS By MS/MS 1 1 273390000 121430000 151960000 1626 2002 1743 3776;3777 3197;3198 3197 2864 2 KVEEEQEADEEDVSEEEAESKEGTNK SESAQPLKKVEEEQEA ESKEGTNKDFPQNAIR K K V N K D 2 0 1 2 0 1 11 1 0 0 0 3 0 0 0 2 1 0 0 2 0 0 26 2 2966.2636 Q9H3N1 Q9H3N1 234 259 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 3;4 0.00018069 61.488 By MS/MS By MS/MS 2 2 28429000 13408000 15020000 1627 2002 1744 3778;3779;3780;3781 3199;3200 3199 2864 2 KVELSESEEDKGGK PSPAPKPRKVELSESE SEEDKGGKMAAADSVQ R K V G K M 0 0 0 1 0 0 4 2 0 0 1 3 0 0 0 2 0 0 0 1 0 0 14 2 1533.7522 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 454 467 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 8.0711E-09 110.6 By MS/MS By MS/MS 2 3 36319000 17602000 18717000 1628 346 1745;1746 3782;3783;3784;3785;3786 3201;3202;3203;3204 3202 494;495 4 KVESLQEEIAFLK LARLDLERKVESLQEE QEEIAFLKKLHEEEIQ R K V L K K 1 0 0 0 0 1 3 0 0 1 2 2 0 1 0 1 0 0 0 1 0 0 13 1 1532.845 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 223 235 VIM Vimentin yes no 3 0.018316 54.276 By MS/MS 1 364300 364300 0 1629 1243 1747 3787 3205 3205 1 KVLSDSEDEEKDADVPGTSTR PLYNSMKKKVLSDSED DVPGTSTRKRKDHQPR K K V T R K 1 1 0 4 0 0 3 1 0 0 1 2 0 0 1 3 2 0 0 2 0 0 21 2 2277.0608 Q8WWQ0 Q8WWQ0 1278 1298 PHIP PH-interacting protein yes yes 3 0.010405 56.562 By MS/MS 1 7064000 0 7064000 1630 1840 1748 3788 3206 3206 2589;2590 1 KVLSPTAAKPSPFEGK GIKIKKKKKVLSPTAA KPSPFEGKTSTEPSTA K K V G K T 2 0 0 0 0 0 1 1 0 0 1 3 0 1 3 2 1 0 0 1 0 0 16 2 1655.9247 Q96QC0 Q96QC0 310 325 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 3 0.0080857 58.824 By MS/MS By MS/MS 1 1 6113000 3322500 2790500 1631 1923 1749 3789;3790 3207;3208 3208 2718 2 KVMDSDEDDDY TTVKFNRRKVMDSDED DSDEDDDY________ R K V D Y - 0 0 0 5 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 11 1 1330.4871 K7EQA1;O14737 K7EQA1 77 87 PDCD5 Programmed cell death protein 5 yes no 2 7.897E-32 158.34 By MS/MS By MS/MS 2 2 130310000 58227000 72086000 1632 1051 1750;1751 3791;3792;3793;3794 3209;3210;3211;3212;3213;3214;3215;3216;3217;3218 3218 120 1388;4218 10 KVPQVSTPTLVEVSR ALLVRYTKKVPQVSTP PTLVEVSRNLGKVGSK K K V S R N 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 2 0 0 4 0 0 15 1 1638.9305 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3;CON__P02769 A0A0C4DGB6 438 452 ALB Serum albumin no no 3 1.5458E-05 97.073 By MS/MS By MS/MS 1 1 2982600 1500100 1482500 + 1633 209;503 1752 3795;3796 3219;3220 3219 2 KVQVAALQASPPLDQDDR AIVVKRPRKVQVAALQ PPLDQDDRAFEVMDEF R K V D R A 3 1 0 3 0 3 0 0 0 0 2 1 0 0 2 1 0 0 0 2 0 0 18 1 1950.0171 A0A1B0GTW1;Q9UDY2;U3KQJ2;B1AN86 A0A1B0GTW1 180 197 TJP2 Tight junction protein ZO-2 yes no 3 0.007845 46.569 By MS/MS By MS/MS 1 1 1802600 886720 915880 1634 290 1753 3797;3798 3221;3222 3222 412 2 KVSGDSSHTETTAEEVPEDPLLK TLRVDRKRKVSGDSSH VPEDPLLKAKRRRVSK R K V L K A 1 0 0 2 0 0 4 1 1 0 2 2 0 0 2 3 3 0 0 2 0 0 23 1 2468.1918 H7BYY2;Q6W2J9;H7C2V9;A6NE70 H7BYY2 1137 1159 BCOR BCL-6 corepressor yes no 3 0.0016683 55.972 By MS/MS 1 2865700 0 2865700 1635 944 1754 3799 3223 3223 1273 1 KVSSAEGAAKEEPK ________________ GAAKEEPKRRSARLSA R K V P K R 3 0 0 0 0 0 3 1 0 0 0 3 0 0 1 2 0 0 0 1 0 0 14 2 1429.7413 F2Z2W6;F2Z2Y5;H7BXJ5;P05114 F2Z2W6 5 18 HMGN1 Non-histone chromosomal protein HMG-14 yes no 2;3 0.0004162 92.039 By MS/MS By MS/MS 2 2 22867000 11505000 11362000 1636 691 1755 3800;3801;3802;3803 3224;3225;3226 3226 928;929 3 KVTSPLQSPTK RPHPPQLRKVTSPLQS SPLQSPTKAKPKVQED R K V T K A 0 0 0 0 0 1 0 0 0 0 1 2 0 0 2 2 2 0 0 1 0 0 11 1 1184.6765 H0YDE2;A0A1B0GTN9;E9PKC0;Q6IQ23;A0A1B0GUM1;A0A1B0GUN0 H0YDE2 531 541 PLEKHA7 Pleckstrin homology domain-containing family A member 7 yes no 2 0.001506 83.856 By MS/MS 1 1626300 1626300 0 1637 287 1756 3804 3227 3227 406;407 1 KVVDYSQFQESDDADEDYGR MSRPVRNRKVVDYSQF DADEDYGRDSGPPTKK R K V G R D 1 1 0 5 0 2 2 1 0 0 0 1 0 1 0 2 0 0 2 2 0 0 20 1 2364.9982 Q9H1E3 Q9H1E3 9 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 2.5687E-128 177.29 By MS/MS By MS/MS 3 3 805290000 372040000 433250000 1638 1992 1757;1758 3805;3806;3807;3808;3809;3810 3228;3229;3230;3231;3232;3233;3234 3230 447 2848;4432 7 KVVDYSQFQESDDADEDYGRDSGPPTK MSRPVRNRKVVDYSQF RDSGPPTKKIRSSPRE R K V T K K 1 1 0 6 0 2 2 2 0 0 0 2 0 1 2 3 1 0 2 2 0 0 27 2 3047.3268 Q9H1E3 Q9H1E3 9 35 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3;4 0.00052613 59.912 By MS/MS By matching 2 2 171820000 97689000 74130000 1639 1992 1759 3811;3812;3813;3814 3235;3236 3236 2848;4432 2 KVVVSPTK KAAATSAKKVVVSPTK KVVVSPTKKVAVATPA K K V T K K 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 70 NCL Nucleolin yes no 2 1.7719E-43 166.69 By MS/MS By MS/MS 1 1 135830000 59240000 76586000 1640 1294 1760 3815;3816 3237;3238;3239;3240 3237 1703;3664 4 KVVVSPTKK KAAATSAKKVVVSPTK VVVSPTKKVAVATPAK K K V K K V 0 0 0 0 0 0 0 0 0 0 0 3 0 0 1 1 1 0 0 3 0 0 9 2 984.63317 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 71 NCL Nucleolin yes no 2;3 4.4706E-50 172.21 By MS/MS By MS/MS 2 2 652000000 319260000 332740000 1641 1294 1761 3817;3818;3819;3820 3241;3242;3243;3244 3244 1703;3664 4 KVYEDSGIPLPAESPK QIKATVKRKVYEDSGI PLPAESPKKGPKKVAS R K V P K K 1 0 0 1 0 0 2 1 0 1 1 2 0 0 3 2 0 0 1 1 0 0 16 1 1728.8934 F8W038;F8W1H0;H0YIS7;Q8IXM2 F8W038 83 98 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 2 0.00014084 93.92 By MS/MS 1 6199400 0 6199400 1642 750 1762 3821 3245 3245 994 1 KWDGSEEDEDNSK GKAQKSNKKWDGSEED EEDEDNSKKIKERSRI K K W S K K 0 0 1 3 0 0 3 1 0 0 0 2 0 0 0 2 0 1 0 0 0 0 13 1 1537.6169 A0A087WUT6;O60841 A0A087WUT6 160 172 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.00096592 79.804 By MS/MS 1 3817300 3817300 0 1643 43 1763 3822 3246;3247 3247 52 2 KWDGSEEDEDNSKK GKAQKSNKKWDGSEED EDEDNSKKIKERSRIN K K W K K I 0 0 1 3 0 0 3 1 0 0 0 3 0 0 0 2 0 1 0 0 0 0 14 2 1665.7118 A0A087WUT6;O60841 A0A087WUT6 160 173 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.00039153 85.046 By matching By MS/MS 1 1 10987000 4776900 6210000 1644 43 1764 3823;3824 3248 3248 52 1 KWSLNTYK MEKLELVRKWSLNTYK KWSLNTYKCTRQIISE R K W Y K C 0 0 1 0 0 0 0 0 0 0 1 2 0 0 0 1 1 1 1 0 0 0 8 1 1038.5498 P53367 P53367 130 137 ARFIP1 Arfaptin-1 yes yes 2 0.015937 90.434 By matching By MS/MS 1 1 28132000 13153000 14979000 1645 1403 1765 3825;3826 3249 3249 1893 1 LAAAEETAVSPR RVWSLERRLAAAEETA EETAVSPRKSPRPAGP R L A P R K 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1213.6303 Q9BUH6 Q9BUH6 139 150 C9orf142 Protein PAXX yes yes 2 8.8689E-95 183.28 By MS/MS By MS/MS 1 1 52152000 24642000 27510000 1646 1963 1766 3827;3828 3250;3251 3251 2782 2 LAAEVYKDMPETSFTR GEDVENSRLAAEVYKD MPETSFTRTISNPEVV R L A T R T 2 1 0 1 0 0 2 0 0 0 1 1 1 1 1 1 2 0 1 1 0 0 16 1 1856.8978 A8MQ02;J3KN01;P55196;Q5TIG5;F8W9I4;E9PFY5 A8MQ02 157 172 MLLT4 Afadin yes no 3 0.00047634 88.507 By MS/MS By MS/MS 1 1 1557300 464350 1093000 1647 338 1767 3829;3830 3252;3253 3253 4071 2 LAAPSVSHVSPR QTSERANKLAAPSVSH SVSHVSPRKNPSVVIK K L A P R K 2 1 0 0 0 0 0 0 1 0 1 0 0 0 2 3 0 0 0 2 0 0 12 0 1219.6673 A0A0U1RRM7;A0A0U1RQW3;Q8WXE1 A0A0U1RRM7 122 133 ATRIP ATR-interacting protein yes no 2;3 0.00067311 92.457 By MS/MS By MS/MS 2 2 13986000 7244400 6741700 1648 269 1768 3831;3832;3833;3834 3254;3255;3256;3257 3257 383;384 4 LADAMAESPSRDVVGSGTELQR TEEGLRERLADAMAES GSGTELQREGSIETLS R L A Q R E 3 2 0 2 0 1 2 2 0 0 2 0 1 0 1 3 1 0 0 2 0 0 22 1 2288.1067 K7ESE9;Q9H6U6 K7ESE9 633 654 BCAS3 Breast carcinoma-amplified sequence 3 yes no 3 0.0025289 60.034 By MS/MS By matching 1 1 2118400 1061400 1057000 1649 1055 1769 3835;3836 3258 3258 122 1394 1 LAEDEGDSEPEAVGQSR KRKKFPDRLAEDEGDS PEAVGQSRGRRQKK__ R L A S R G 2 1 0 2 0 1 4 2 0 0 1 0 0 0 1 2 0 0 0 1 0 0 17 0 1787.781 Q9UIG0 Q9UIG0 1461 1477 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.001602 83.106 By MS/MS By matching 1 1 35218000 16507000 18711000 1650 2100 1770 3837;3838 3259 3259 3008 1 LAEQFVLLNLVYETTDK AENKEIQKLAEQFVLL LVYETTDKHLSPDGQY K L A D K H 1 0 1 1 0 1 2 0 0 0 4 1 0 1 0 0 2 0 1 2 0 0 17 0 1995.0565 C9J3E2;B5MC07;O95994;H7C3Z9 C9J3E2 100 116 AGR2 Anterior gradient protein 2 homolog yes no 2;3 4.8494E-72 161.26 By MS/MS By MS/MS 2 2 45263000 26469000 18795000 1651 391 1771 3839;3840;3841;3842 3260;3261;3262;3263;3264 3264 5 LAIQGPEDSPSR RRAEGPPRLAIQGPED GPEDSPSRQSRRYDW_ R L A S R Q 1 1 0 1 0 1 1 1 0 1 1 0 0 0 2 2 0 0 0 0 0 0 12 0 1268.6361 Q15773 Q15773 230 241 MLF2 Myeloid leukemia factor 2 yes yes 2 2.3805E-08 115.12 By MS/MS By MS/MS 1 1 20115000 10226000 9888900 1652 1568 1772 3843;3844 3265;3266 3266 2166 2 LALDLEIATYR YQELMNTKLALDLEIA DLEIATYRTLLEGEES K L A Y R T 2 1 0 1 0 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 11 0 1276.7027 CON__P04264;P04264 CON__P04264 473 483 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.0017008 81.338 By MS/MS 1 0 0 0 + 1653 504 1773 3845 3267 3267 1 LAPSPARPR VPASFFRRLAPSPARP APSPARPRHPAEAPNN R L A P R H 2 2 0 0 0 0 0 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 9 1 963.5614 O14654 O14654 436 444 IRS4 Insulin receptor substrate 4 yes yes 2 0.010187 87.789 By MS/MS By matching 1 1 27414000 14875000 12539000 1654 1094 1774 3846;3847 3268 3268 1456 1 LAPVPSPEPQKPAPVSPESVK VPVCESQKLAPVPSPE PVSPESVKATLSNPKP K L A V K A 2 0 0 0 0 1 2 0 0 0 1 2 0 0 7 3 0 0 0 3 0 0 21 1 2153.1732 Q96JM3 Q96JM3 199 219 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 1.7294E-17 112.16 By MS/MS By MS/MS 2 2 40475000 19907000 20568000 1655 1903 1775;1776 3848;3849;3850;3851 3269;3270;3271;3272 3271 2696;2697 4 LASDDRPSPPR HTSMDLPKLASDDRPS DDRPSPPRGLVAAYSG K L A P R G 1 2 0 2 0 0 0 0 0 0 1 0 0 0 3 2 0 0 0 0 0 0 11 1 1209.6102 A0A0A0MR66;P98175 A0A0A0MR66 781 791 RBM10 RNA-binding protein 10 yes no 2 0.015857 68.751 By matching By MS/MS 1 1 15553000 7244800 8307800 1656 133 1777 3852;3853 3273 3273 181 1 LASELAKTPQK KHSEKMAKLASELAKT ELAKTPQKSVSFSLKN K L A Q K S 2 0 0 0 0 1 1 0 0 0 2 2 0 0 1 1 1 0 0 0 0 0 11 1 1184.6765 Q13416 Q13416 109 119 ORC2 Origin recognition complex subunit 2 yes yes 3 0.015134 76.01 By matching By MS/MS 1 1 1783000 933550 849470 1657 1502 1778 3854;3855 3274 3274 3741 1 LASPELER SPDVGLLKLASPELER LASPELERLIIQSSNG K L A E R L 1 1 0 0 0 0 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 8 0 913.4869 P05412;P17535 P05412 71 78 JUN;JUND Transcription factor AP-1;Transcription factor jun-D yes no 2 0.011517 83.883 By MS/MS By MS/MS 1 1 34197000 16388000 17809000 1658 1220 1779 3856;3857 3275;3276 3276 1613 2 LASQNISRLQDELTTTKR EALTEEMKLASQNISR DELTTTKRSYEDQLSM K L A K R S 1 2 1 1 0 2 1 0 0 1 3 1 0 0 0 2 3 0 0 0 0 0 18 2 2073.1178 Q6ZMI0 Q6ZMI0 719 736 PPP1R21 Protein phosphatase 1 regulatory subunit 21 yes yes 3 0.017374 46.926 By matching By MS/MS 1 1 1903000 198560 1704500 1659 1695 1780 3858;3859 3277 3277 232 3821;3822;3823 0 LASTNSSVLGADLPSSMK ETAKATPRLASTNSSV ADLPSSMKEKAKAETE R L A M K E 2 0 1 1 0 0 0 1 0 0 3 1 1 0 1 5 1 0 0 1 0 0 18 0 1776.8928 J3KQ96;E7ETY2;Q13428;H0YA99 J3KQ96 105 122 TCOF1 Treacle protein yes no 2 0.011138 52.265 By matching By MS/MS 1 1 890840 307810 583030 1660 591 1781 3860;3861 3278 3278 797 1 LASTSDIEEK VAPTIPRRLASTSDIE STSDIEEKENRDSSSL R L A E K E 1 0 0 1 0 0 2 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 10 0 1091.5346 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 505 514 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.0058226 78.548 By matching By MS/MS 1 1 4853800 1879200 2974600 1661 1098 1782 3862;3863 3279 3279 1463;3597 1 LASTSDIEEKENR VAPTIPRRLASTSDIE DIEEKENRDSSSLRTS R L A N R D 1 1 1 1 0 0 3 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 13 1 1490.7213 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 505 517 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2;3 3.2283E-05 105.95 By MS/MS By MS/MS 2 2 18093000 10364000 7729200 1662 1098 1783 3864;3865;3866;3867 3280;3281;3282 3281 1463;3597 3 LATKSSPVKVGEK SAMKVGEKLATKSSPV SPVKVGEKRKAADETL K L A E K R 1 0 0 0 0 0 1 1 0 0 1 3 0 0 1 2 1 0 0 2 0 0 13 2 1342.782 P49916 P49916 908 920 LIG3 DNA ligase 3 yes yes 3 0.0033688 72.489 By MS/MS By MS/MS 1 1 3383100 2013700 1369400 1663 1387 1784 3868;3869 3283;3284 3283 1870;3706 1 LATNTSAPDLK STTPRLSRLATNTSAP NTSAPDLKNVRSKVGS R L A L K N 2 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1129.5979 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4;B5MEG9 E7EVA0 2068 2078 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 3.8297E-16 145.81 By MS/MS By MS/MS 1 1 10690000 5952400 4738000 1664 596 1785 3870;3871 3285;3286 3285 815 2 LATTTTDTSSVPK IMELVLGKLATTTTDT TDTSSVPKHGIRRKLI K L A P K H 1 0 0 1 0 0 0 0 0 0 1 1 0 0 1 2 5 0 0 1 0 0 13 0 1320.6773 Q4W8S1;E7ER26;P57071 Q4W8S1 322 334 ZNF298;PRDM15 PR domain zinc finger protein 15 yes no 2 0.016159 43.03 By MS/MS 1 0 0 0 1665 577 1786 3872 3287 3287 3413;3414;3415;3416;3417 1 LAVEALSSLDGDLAGR GERRAIEKLAVEALSS LDGDLAGRYYALKSMT K L A G R Y 3 1 0 2 0 0 1 2 0 0 4 0 0 0 0 2 0 0 0 1 0 0 16 0 1585.8312 G3V4N7;P12277 G3V4N7 157 172 CKB Creatine kinase B-type yes no 2 0.0096127 75.819 By MS/MS By matching 1 1 880720 438730 441990 1666 798 1787 3873;3874 3288 3288 1 LAYKDLEIQMK ESIVSSLRLAYKDLEI KDLEIQMKKDEKMNIS R L A M K K 1 0 0 1 0 1 1 0 0 1 2 2 1 0 0 0 0 0 1 0 0 0 11 1 1350.7217 H0Y6A0;Q9NP61 H0Y6A0 124 134 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes no 2 0.012509 61.593 By matching By MS/MS 1 1 860330 433610 426730 1667 836 1788 3875;3876 3289 3289 4178 1 LAYQELQIDR ESMVASMRLAYQELQI YQELQIDRKKEEKKLQ R L A D R K 1 1 0 1 0 2 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 10 0 1247.651 A0A0D9SF70;G5E9L0;Q8N6H7;H0YDN9;E9PQP3;E9PIY6 A0A0D9SF70 140 149 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 2 0.0071196 60.398 By matching By MS/MS 1 1 1408800 656130 752690 1668 233 1789 3877;3878 3290 3290 4042 1 LCDDGPQLPTSPR VSREPRLRLCDDGPQL PQLPTSPRLTAAARSA R L C P R L 0 1 0 2 1 1 0 1 0 0 2 0 0 0 3 1 1 0 0 0 0 0 13 0 1454.6824 H0YAZ3;H0YB51;O60504 H0YAZ3 32 44 SORBS3 Vinexin yes no 2 0.00063706 86.738 By MS/MS By MS/MS 1 1 20716000 11410000 9306800 1669 864 1790 3879;3880 3291;3292;3293 3292 1162;3518 3 LCDFGSASHVADNDITPYLVSR NESKTILKLCDFGSAS ITPYLVSRFYRAPEII K L C S R F 2 1 1 3 1 0 0 1 1 1 2 0 0 1 1 3 1 0 1 2 0 0 22 0 2436.138 Q13523;H0YDJ3 Q13523 832 853 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 3 8.0868E-46 132.74 By MS/MS By MS/MS 1 1 15913000 6447400 9465100 1670 1505 1791 3881;3882 3294;3295;3296 3296 2062;4348 3 LCLASSVMR EPWSIREKLCLASSVM CLASSVMRSGDQNW__ K L C M R S 1 1 0 0 1 0 0 0 0 0 2 0 1 0 0 2 0 0 0 1 0 0 9 0 1035.5205 F8WDX5;D6RID0;F8WCS7;F8WBH2;C9JV05;H7C128;H7C179;B5MCW3;H7C127;Q9H0E9 F8WDX5 25 33 BRD8 Bromodomain-containing protein 8 yes no 3 0.020298 40.882 By matching By MS/MS 1 1 5008100 2244900 2763200 1671 394 1792 3883;3884 3297 3297 53 1 LCSSSSSDTSSR LRKAKRARLCSSSSSD SSSDTSSRSFFDPTSQ R L C S R S 0 1 0 1 1 0 0 0 0 0 1 0 0 0 0 7 1 0 0 0 0 0 12 0 1272.5252 C9J0I9;Q86WB0 C9J0I9 362 373 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.0011502 95.273 By MS/MS By MS/MS 1 1 3977300 2027800 1949500 1672 432 1793 3885;3886 3298;3299;3300 3300 614 3 LCYVALDFEQEMATAASSSSLEK IVRDIKEKLCYVALDF ASSSSLEKSYELPDGQ K L C E K S 4 0 0 1 1 1 3 0 0 0 3 1 1 1 0 4 1 0 1 1 0 0 23 0 2549.1666 P63261;P60709;I3L4N8;Q6S8J3 P63261 216 238 ACTG1;ACTB;POTEE Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E yes no 3 0.00085959 61.963 By MS/MS 1 9739200 0 9739200 1673 1422 1794 3887 3301 3301 1 LDGENIYIR AWKKKRERLDGENIYI DGENIYIRHSNLMLED R L D I R H 0 1 1 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 9 0 1091.5611 Q4VB86;P11171 Q4VB86 412 420 EPB41 Protein 4.1 yes no 2 0.001708 121.05 By MS/MS By MS/MS 1 1 28438000 13083000 15355000 1674 1257 1795 3888;3889 3302;3303 3303 4267 2 LDIDSPPITAR TFLEHMCRLDIDSPPI DSPPITARNTGIICTI R L D A R N 1 1 0 2 0 0 0 0 0 2 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1196.6401 B4DNK4;P14618;H3BTN5;H3BQ34;H3BN34;H3BQZ3;H3BU13;H3BT25;H3BUW1;H3BTJ2 B4DNK4 33 43 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 0.011985 60.628 By matching By MS/MS 1 1 4789700 2391600 2398100 1675 376 1796 3890;3891 3304 3304 538 1 LDIPTGTTPQRK CFLEQDLKLDIPTGTT TGTTPQRKSYLYPSTL K L D R K S 0 1 0 1 0 1 0 1 0 1 1 1 0 0 2 0 3 0 0 0 0 0 12 1 1325.7303 P52732 P52732 919 930 KIF11 Kinesin-like protein KIF11 yes yes 2 0.0019534 98.902 By MS/MS By MS/MS 1 1 6483800 2689400 3794400 1676 1399 1797 3892;3893 3305;3306 3305 3710;3711 2 LDLATHPTTPR ________________ ATHPTTPRSELSSVVL R L D P R S 1 1 0 1 0 0 0 0 1 0 2 0 0 0 2 0 3 0 0 0 0 0 11 0 1220.6513 H7C511 H7C511 4 14 IMPDH1 yes yes 2 0.020722 40.058 By MS/MS 1 339340 0 339340 1677 972 1798 3894 3307 3307 3547;3548;3549 0 LDNLVAILDINR MAFASIYKLDNLVAIL VAILDINRLGQSDPAP K L D N R L 1 1 2 2 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 1 0 0 12 0 1367.7773 E9PFF2;A0A0B4J1R6;P29401 E9PFF2 175 186 TKT Transketolase yes no 2 0.0010279 97.734 By MS/MS By matching 1 1 2959700 1451300 1508400 1678 190 1799 3895;3896 3308 3308 1 LDPSEVYLK IIRSGSPKLDPSEVYL DPSEVYLKSKTLYEDK K L D L K S 0 0 0 1 0 0 1 0 0 0 2 1 0 0 1 1 0 0 1 1 0 0 9 0 1062.5597 Q5TCQ9 Q5TCQ9 727 735 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 yes yes 2 0.0087509 63.48 By MS/MS 1 212080 212080 0 1679 1635 1800 3897 3309 3309 4369 1 LDQPVSAPPSPR EKRILQEKLDQPVSAP VSAPPSPRDISMEIDS K L D P R D 1 1 0 1 0 1 0 0 0 0 1 0 0 0 4 2 0 0 0 1 0 0 12 0 1262.6619 Q16204 Q16204 235 246 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 2.4121E-08 115 By MS/MS By MS/MS 2 2 36160000 16976000 19184000 1680 1572 1801;1802 3898;3899;3900;3901 3310;3311;3312;3313;3314;3315;3316;3317;3318 3311 2168;2169 9 LDSPYFR PFDKYAPKLDSPYFRH KLDSPYFRHSSVSFFP K L D F R H 0 1 0 1 0 0 0 0 0 0 1 0 0 1 1 1 0 0 1 0 0 0 7 0 896.43922 Q9HCM7 Q9HCM7 485 491 FBRSL1 Fibrosin-1-like protein yes yes 2 0.014201 88.177 By matching By MS/MS 1 1 1456100 550490 905580 1681 2034 1803 3902;3903 3319 3319 2907 1 LDSQPQETSPELPR HVTEGIPRLDSQPQET ETSPELPRRRVRHQGD R L D P R R 0 1 0 1 0 2 2 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 14 0 1595.7791 O14545 O14545 407 420 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 6.3505E-89 172.85 By MS/MS By MS/MS 1 1 52319000 23001000 29319000 1682 1092 1804 3904;3905 3320;3321;3322 3320 1442;3593 3 LDSSPSVSSTLAAK QASKATPKLDSSPSVS VSSTLAAKDDPDGKQE K L D A K D 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 1 0 0 14 0 1361.7038 J3KQ96;E7ETY2;Q13428 J3KQ96 1187 1200 TCOF1 Treacle protein yes no 2 3.2139E-09 111.83 By MS/MS By MS/MS 1 1 12545000 5369000 7176300 1683 591 1805 3906;3907 3323;3324 3324 798 2 LDSSPVSSPR FGPNKMMRLDSSPVSS SSPVSSPRKHSAELIA R L D P R K 0 1 0 1 0 0 0 0 0 0 1 0 0 0 2 4 0 0 0 1 0 0 10 0 1043.5247 O60293 O60293 946 955 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 0.011842 65.842 By MS/MS 1 0 0 0 1684 1135 1806 3908 3325 3325 1509 1 LDVTILSPSRK RGAGGQGKLDVTILSP TILSPSRKVVPCLVTP K L D R K V 0 1 0 1 0 0 0 0 0 1 2 1 0 0 1 2 1 0 0 1 0 0 11 1 1227.7187 O75369;E7EN95 O75369 977 987 FLNB Filamin-B yes no 2 0.014641 66.692 By MS/MS 1 320640 0 320640 1685 1158 1807 3909 3326 3326 1542;1543 1 LDYCGGSGEPGGVQR RKLRAMCRLDYCGGSG GEPGGVQRAFSASSAS R L D Q R A 0 1 0 1 1 1 1 5 0 0 1 0 0 0 1 1 0 0 1 1 0 0 15 0 1550.6784 Q15464 Q15464 112 126 SHB SH2 domain-containing adapter protein B yes yes 2 0.00055612 72.34 By MS/MS By matching 1 1 3076700 1722000 1354700 1686 1557 1808 3910;3911 3327 3327 4359 1 LEASTSDPLPAR PGSNRKLRLEASTSDP TSDPLPARGGSALPGS R L E A R G 2 1 0 1 0 0 1 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 12 0 1255.6408 A5PKW4 A5PKW4 151 162 PSD PH and SEC7 domain-containing protein 1 yes yes 2 0.020037 54.608 By MS/MS By MS/MS 1 1 1994000 920890 1073100 1687 326 1809 3912;3913 3328;3329 3329 465;3321 2 LEELENLVSSLR DVKELLSRLEELENLV ENLVSSLREQCTAGAG R L E L R E 0 1 1 0 0 0 3 0 0 0 4 0 0 0 0 2 0 0 0 1 0 0 12 0 1400.7511 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 126 137 TNC Tenascin yes no 2 8.0341E-11 130.41 By MS/MS By MS/MS 1 1 2240200 1407300 832970 1688 723 1810 3914;3915 3330;3331 3330 2 LEEPPELNRQSPNPR LVPNGFSKLEEPPELN NRQSPNPRRGHAVPPT K L E P R R 0 2 2 0 0 1 3 0 0 0 2 0 0 0 4 1 0 0 0 0 0 0 15 1 1774.8962 Q7Z5L9 Q7Z5L9 165 179 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2;3 0.00040384 80.387 By MS/MS By MS/MS 2 2 94782000 41454000 53328000 1689 1718 1811 3916;3917;3918;3919 3332;3333;3334 3333 2415 3 LEGLTDEINFLR NKVELESRLEGLTDEI TDEINFLRQLYEKEIR R L E L R Q 0 1 1 1 0 0 2 1 0 1 3 0 0 1 0 0 1 0 0 0 0 0 12 0 1418.7405 CON__H-INV:HIT000292931;CON__P05787;P05787;F8VUG2;F8W1U3;F8VP67 CON__H-INV:HIT000292931 174 185 KRT8 Keratin, type II cytoskeletal 8 no no 2 0.0040003 73.885 By MS/MS By MS/MS 1 1 1704400 904370 800050 + 1690 498;730 1812 3920;3921 3335;3336 3335 2 LEGVDGGQSPR ADEDLIFRLEGVDGGQ VDGGQSPRAGHDGDSD R L E P R A 0 1 0 1 0 1 1 3 0 0 1 0 0 0 1 1 0 0 0 1 0 0 11 0 1113.5415 H3BRH4;O00418 H3BRH4 10 20 EEF2K Eukaryotic elongation factor 2 kinase yes no 2 0.0049991 76.522 By MS/MS 1 0 0 0 1691 926 1813 3922 3337 3337 1236 1 LEHLYLNNNSIEK SVPAINNRLEHLYLNN LNNNSIEKINGTQICP R L E E K I 0 0 3 0 0 0 2 0 1 1 3 1 0 0 0 1 0 0 1 0 0 0 13 0 1585.81 P51888 P51888 313 325 PRELP Prolargin yes yes 3 0.0090434 58.595 By MS/MS 1 602300 602300 0 1692 1398 1814 3923 3338 3338 1 LEISPDSSPER SLRHPLRRLEISPDSS SPDSSPERAHYTHSDY R L E E R A 0 1 0 1 0 0 2 0 0 1 1 0 0 0 2 3 0 0 0 0 0 0 11 0 1228.5935 Q99959 Q99959 148 158 PKP2 Plakophilin-2 yes yes 2 0.008784 63.966 By MS/MS By MS/MS 1 1 979770 474970 504800 1693 1947 1815 3924;3925 3339;3340 3340 2757;2758 2 LELFLPEEYPMAAPK PFEGGTFKLELFLPEE EYPMAAPKISGPQHCR K L E P K I 2 0 0 0 0 0 3 0 0 0 3 1 1 1 3 0 0 0 1 0 0 0 15 0 1746.8902 F8VZ29;F8VSD4;F8VV71;P61088 F8VZ29 54 68 UBE2N Ubiquitin-conjugating enzyme E2 N yes no 3 0.00016436 41.996 By MS/MS 1 0 0 0 1694 737 1816 3926 3341 3341 86 4164 1 LELQGPRGSPNAR EIEGRAIRLELQGPRG PRGSPNARSQPSKTLF R L E A R S 1 2 1 0 0 1 1 2 0 0 2 0 0 0 2 1 0 0 0 0 0 0 13 1 1393.7426 P19338;H7BY16 P19338 555 567 NCL Nucleolin yes no 2;3 0.0078073 57.159 By matching By MS/MS 2 2 39188000 25363000 13825000 1695 1294 1817;1818 3927;3928;3929;3930 3342;3343 3343 180 1701 2 LENLLLLDLQHNR IPPGVFSKLENLLLLD LLDLQHNRLSDGVFKP K L E N R L 0 1 2 1 0 1 1 0 1 0 6 0 0 0 0 0 0 0 0 0 0 0 13 0 1589.8889 P51888 P51888 194 206 PRELP Prolargin yes yes 2;3 9.0136E-40 155.99 By MS/MS By MS/MS 2 2 4348900 2721300 1627600 1696 1398 1819 3931;3932;3933;3934 3344;3345;3346;3347 3345 4 LEPIETNQNAVFQYISR DKREYIIKLEPIETNQ AVFQYISRTDNPIEVT K L E S R T 1 1 2 0 0 2 2 0 0 2 1 0 0 1 1 1 1 0 1 1 0 0 17 0 2021.0218 C9JHX9;A0A087WXB4;Q2TB10 C9JHX9 133 149 ZNF800 Zinc finger protein 800 yes no 3 0.011071 55.213 By matching By MS/MS 1 1 3901600 1821100 2080500 1697 71 1820 3935;3936 3348 3348 11;335;336 92 1 LEPLGETHHNDFYR PKVTRLPKLEPLGETH THHNDFYRKPLPPLAV K L E Y R K 0 1 1 1 0 0 2 1 2 0 2 0 0 1 1 0 1 0 1 0 0 0 14 0 1726.8063 Q3SXY8 Q3SXY8 394 407 ARL13B ADP-ribosylation factor-like protein 13B yes yes 3 0.0012403 64.65 By MS/MS By MS/MS 1 1 2956200 1481100 1475100 1698 1585 1821 3937;3938 3349;3350 3349 4365 2 LEQNALKR KNNSGSCKLEQNALKR LEQNALKRNWSNAGKY K L E K R N 1 1 1 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 8 1 970.55598 Q8IXS0 Q8IXS0 362 369 FAM217A Protein FAM217A yes yes 2 0.016679 43.246 By MS/MS 1 0 0 0 1699 1757 1822 3939 3351 3351 245 1 LESESTSPSLEMK SSEVSKPKLESESTSP TSPSLEMKIHNFLKGN K L E M K I 0 0 0 0 0 0 3 0 0 0 2 1 1 0 1 4 1 0 0 0 0 0 13 0 1436.6705 Q5VT52 Q5VT52 659 671 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 0.0058428 72.006 By MS/MS By MS/MS 1 1 4438800 1739600 2699200 1700 1644 1823 3940;3941 3352;3353 3352 242 2293;2294;3809 2 LESLNIQR TIEERKERLESLNIQR LESLNIQREKEELEQR R L E Q R E 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 971.53999 Q14152 Q14152 582 589 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.011455 83.948 By MS/MS By matching 1 1 2112300 975040 1137300 1701 1515 1824 3942;3943 3354 3354 2072 1 LETKWSLLQQQKTAR ________________ LQQQKTARSNMDNMFE M L E A R S 1 1 0 0 0 3 1 0 0 0 3 2 0 0 0 1 2 1 0 0 0 0 15 2 1829.0159 F8VP67 F8VP67 2 16 KRT8 yes yes 2 0.018788 41.386 By MS/MS 1 0 0 0 1702 730 1825 3944 3355 3355 3477;3478 1 LFAVAPNQNLK RAREEGIRLFAVAPNQ VAPNQNLKEQGLRDIA R L F L K E 2 0 2 0 0 1 0 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 11 0 1213.6819 P12110 P12110 187 197 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.0062455 73.931 By MS/MS By matching 1 1 1525400 1000200 525130 1703 1263 1826 3945;3946 3356 3356 1 LFDDEASVDEPR FTLVCCRRLFDDEASV EASVDEPRRTETSLPE R L F P R R 1 1 0 3 0 0 2 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 12 0 1391.6205 Q8NI35;A0A0U1RR46;A0A0X1KG69;A0A087WUZ6 Q8NI35 639 650 INADL InaD-like protein yes no 2 0.0047011 70.412 By MS/MS By matching 1 1 1780700 926060 854660 1704 1810 1827 3947;3948 3357 3357 2551 1 LFEDDDSNEKLFDEEEDSSEK EVEDADEKLFEDDDSN EEEDSSEKLFDDSDER K L F E K L 0 0 1 5 0 0 6 0 0 0 2 2 0 2 0 3 0 0 0 0 0 0 21 1 2519.0347 O43719 O43719 696 716 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.010949 47.088 By matching By MS/MS 1 1 2491500 1371800 1119800 1705 1127 1828 3949;3950 3358 3358 1501 1 LFEESDDKEDEDADGKEVEDADEK EEGDADEKLFEESDDK EVEDADEKLFEDDDSN K L F E K L 2 0 0 7 0 0 7 1 0 0 1 3 0 1 0 1 0 0 0 1 0 0 24 2 2756.1308 O43719 O43719 672 695 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.00064927 74.703 By MS/MS By matching 1 1 34252000 22205000 12047000 1706 1127 1829 3951;3952 3359 3359 1502 1 LFGGFNSSDTVTSPQR APAAAEPKLFGGFNSS DTVTSPQRAGPLAGGV K L F Q R A 0 1 1 1 0 1 0 2 0 0 1 0 0 2 1 3 2 0 0 1 0 0 16 0 1711.8166 P12931 P12931 63 78 SRC Proto-oncogene tyrosine-protein kinase Src yes yes 2 0.0083064 65.395 By matching By MS/MS 1 1 2082100 930790 1151300 1707 1266 1830 3953;3954 3360 3360 1670;3652 1 LFIGGLSFETTDESLR KEPEQLRKLFIGGLSF ETTDESLRSHFEQWGT K L F L R S 0 1 0 1 0 0 2 2 0 1 3 0 0 2 0 2 2 0 0 0 0 0 16 0 1783.8992 F8W6I7;P09651;F8VTQ5;F8W646;F8VZ49;Q32P51 F8W6I7 16 31 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 1.2507E-05 95.417 By MS/MS By MS/MS 1 1 4310800 2502900 1807800 1708 752 1831 3955;3956 3361;3362 3361 2 LFIGGLSFETTEESLR REKEQFRKLFIGGLSF ETTEESLRNYYEQWGK K L F L R N 0 1 0 0 0 0 3 2 0 1 3 0 0 2 0 2 2 0 0 0 0 0 16 0 1797.9149 P22626;A0A087WUI2 P22626 23 38 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 3.8173E-14 113.61 By MS/MS By MS/MS 1 1 5327600 3912600 1415000 1709 1305 1832 3957;3958 3363;3364 3364 2 LFLINEQSPR GINKLLNKLFLINEQS LINEQSPRASEETLLG K L F P R A 0 1 1 0 0 1 1 0 0 1 2 0 0 1 1 1 0 0 0 0 0 0 10 0 1215.6612 E9PFF8;Q6NW34 E9PFF8 188 197 C3orf17 Uncharacterized protein C3orf17 yes no 2 0.0068611 72.434 By matching By MS/MS 1 1 755480 329630 425850 1710 623 1833 3959;3960 3365 3365 848 1 LFQQIYSDGSDEVKR EGDAALNRLFQQIYSD DGSDEVKRAMNKSFME R L F K R A 0 1 0 2 0 2 1 1 0 1 1 1 0 1 0 2 0 0 1 1 0 0 15 1 1783.8741 Q9Y2Z0 Q9Y2Z0 312 326 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2 5.6108E-07 103.34 By MS/MS By matching 1 1 4813100 2090300 2722900 1711 2149 1834 3961;3962 3366;3367 3366 3124 2 LFSQGQDVSNK LTFKERQRLFSQGQDV QGQDVSNKVKASRKLT R L F N K V 0 0 1 1 0 2 0 1 0 0 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1221.599 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y8U8;H0Y948 A8MQ02 1754 1764 MLLT4 Afadin yes no 2 0.00072748 103.11 By matching By MS/MS 1 1 39767000 19008000 20758000 1712 338 1835 3963;3964 3368 3368 479 1 LFSQGQDVSNKVK LTFKERQRLFSQGQDV QDVSNKVKASRKLTEL R L F V K A 0 0 1 1 0 2 0 1 0 0 1 2 0 1 0 2 0 0 0 2 0 0 13 1 1448.7623 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y8U8;H0Y948 A8MQ02 1754 1766 MLLT4 Afadin yes no 2 1.1573E-15 138.31 By MS/MS 1 12836000 12836000 0 1713 338 1836 3965 3369 3369 479 1 LFSTKGK TLEERAQRLFSTKGKS RLFSTKGKSLESLDTS R L F G K S 0 0 0 0 0 0 0 1 0 0 1 2 0 1 0 1 1 0 0 0 0 0 7 1 779.45414 Q12874 Q12874 285 291 SF3A3 Splicing factor 3A subunit 3 yes yes 1 0.016886 45.972 By MS/MS 1 272950 0 272950 1714 1480 1837 3966 3370 3370 2002;3735 1 LGAAPEEESAYVAGEK PFAGGGYRLGAAPEEE SAYVAGEKRQHSSQDV R L G E K R 4 0 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 16 0 1619.7679 F2Z2K0;Q9UNZ2 F2Z2K0 157 172 NSFL1C NSFL1 cofactor p47 yes no 2 2.8121E-07 100.82 By MS/MS By MS/MS 1 1 10862000 5481800 5380500 1715 688 1838 3967;3968 3371;3372;3373 3372 925;4159 3 LGAAPEEESAYVAGEKR PFAGGGYRLGAAPEEE AYVAGEKRQHSSQDVH R L G K R Q 4 1 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 17 1 1775.869 F2Z2K0;Q9UNZ2 F2Z2K0 157 173 NSFL1C NSFL1 cofactor p47 yes no 2;3 2.5422E-31 138.45 By MS/MS By MS/MS 2 2 160010000 81575000 78438000 1716 688 1839 3969;3970;3971;3972 3374;3375;3376;3377 3374 925;4159 4 LGAGEGGEASVSPEK PRSKKKKKLGAGEGGE EASVSPEKTSTTSKGK K L G E K T 2 0 0 0 0 0 3 4 0 0 1 1 0 0 1 2 0 0 0 1 0 0 15 0 1386.6627 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1343 TCOF1 Treacle protein yes no 2 1.5018E-29 144.08 By MS/MS By MS/MS 1 1 13730000 6151000 7579300 1717 591 1840 3973;3974 3378;3379 3378 794 2 LGAGEGGEASVSPEKTSTTSK PRSKKKKKLGAGEGGE EKTSTTSKGKAKRDKA K L G S K G 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 4 3 0 0 1 0 0 21 1 1991.9647 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1349 TCOF1 Treacle protein yes no 3 3.7347E-07 99.097 By MS/MS By MS/MS 1 1 137230000 63663000 73563000 1718 591 1841 3975;3976 3380;3381 3381 794 2 LGAGEGGEASVSPEKTSTTSKGK PRSKKKKKLGAGEGGE TSTTSKGKAKRDKASG K L G G K A 2 0 0 0 0 0 3 5 0 0 1 3 0 0 1 4 3 0 0 1 0 0 23 2 2177.0812 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1351 TCOF1 Treacle protein yes no 3 0.0067697 56.588 By MS/MS By matching 1 1 7050700 4190100 2860600 1719 591 1842 3977;3978 3382 3382 794 1 LGAGGGSPEKSPSAQELK EEKEGGARLGAGGGSP SPSAQELKEQGNRLFV R L G L K E 2 0 0 0 0 1 2 4 0 0 2 2 0 0 2 3 0 0 0 0 0 0 18 1 1711.8741 H3BS86;Q9UNE7 H3BS86 13 30 STUB1 E3 ubiquitin-protein ligase CHIP yes no 2;3 8.9335E-29 121.51 By MS/MS By MS/MS 5 5 440450000 204480000 235970000 1720 929 1843;1844 3979;3980;3981;3982;3983;3984;3985;3986;3987;3988 3383;3384;3385;3386;3387;3388;3389;3390;3391 3390 1245;1246;1247 9 LGAGGGSPEKSPSAQELKEQGNR EEKEGGARLGAGGGSP ELKEQGNRLFVGRKYP R L G N R L 2 1 1 0 0 2 3 5 0 0 2 2 0 0 2 3 0 0 0 0 0 0 23 2 2296.1408 H3BS86;Q9UNE7 H3BS86 13 35 STUB1 E3 ubiquitin-protein ligase CHIP yes no 3 0.00044647 68.134 By MS/MS By MS/MS 2 2 43637000 22599000 21039000 1721 929 1845;1846 3989;3990;3991;3992 3392;3393 3393 1245;1246;1247 2 LGASNSPGQPNSVK PKIGLSLKLGASNSPG PGQPNSVKRKKLPVDS K L G V K R 1 0 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 14 0 1354.6841 P49756 P49756 672 685 RBM25 RNA-binding protein 25 yes yes 2 0 233.47 By MS/MS By MS/MS 1 1 76996000 39605000 37391000 1722 1382 1847 3993;3994 3394;3395;3396;3397 3395 1848;1849 4 LGASNSPGQPNSVKR PKIGLSLKLGASNSPG GQPNSVKRKKLPVDSV K L G K R K 1 1 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 15 1 1510.7852 P49756 P49756 672 686 RBM25 RNA-binding protein 25 yes yes 3 8.9723E-05 77.633 By MS/MS By matching 1 1 7983100 4310400 3672800 1723 1382 1848 3995;3996 3398 3398 1848;1849 1 LGDSSLSR RRREEERRLGDSSLSR LGDSSLSRKDSRWGDR R L G S R K 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 0 0 0 8 0 833.4243 Q14152 Q14152 878 885 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 1.0637E-06 114.51 By MS/MS By MS/MS 2 1 876430 0 876430 1724 1515 1849 3997;3998;3999 3399;3400;3401;3402 3400 2073;2074 4 LGDVYVNDAFGTAHR AFRASLSKLGDVYVND DAFGTAHRAHSSMVGV K L G H R A 2 1 1 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 1 2 0 0 15 0 1633.7849 P07205;P00558 P07205 157 171 PGK2;PGK1 Phosphoglycerate kinase 2;Phosphoglycerate kinase 1 yes no 3 0.0098 53.995 By matching By MS/MS 1 1 603490 266680 336810 1725 1204 1850 4000;4001 3403 3403 1 LGEASDSELADADK TSLLRRARLGEASDSE SELADADKASVASEVS R L G D K A 3 0 0 3 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 14 0 1419.6365 H0Y2V6;Q5SW79 H0Y2V6 1072 1085 CEP170 Centrosomal protein of 170 kDa yes no 2 2.3052E-06 104.94 By MS/MS By MS/MS 1 1 4985000 2267200 2717800 1726 815 1851 4002;4003 3404;3405 3405 1086 2 LGEHNIDVLEGNEQFINAAK YKSRIQVRLGEHNIDV EQFINAAKIITHPNFN R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 3 3.4528E-128 176.85 By matching By MS/MS 1 1 73591000 12079000 61512000 + 1727 499 1852 4004;4005 3406 3406 1 LGELVVGPYDNTVVLEELR HPTGDDRRLGELVVGP TVVLEELRAGTTYKVN R L G L R A 0 1 1 1 0 0 3 2 0 0 4 0 0 0 1 0 1 0 1 4 0 0 19 0 2114.1259 D6RGG3;Q99715 D6RGG3 1130 1148 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0073707 62.081 By MS/MS By MS/MS 1 1 10932000 6412700 4519800 1728 538 1853 4006;4007 3407;3408 3408 2 LGEYEDVSR VIDHSGARLGEYEDVS GEYEDVSRVEKYTISQ R L G S R V 0 1 0 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1066.4931 K7EP07;K7EK42;Q99426;K7EL99 K7EP07 44 52 TBCB Tubulin-folding cofactor B yes no 2 4.013E-11 141.52 By MS/MS By MS/MS 1 1 19006000 9044800 9961500 1729 1040 1854 4008;4009 3409;3410 3409 4216 2 LGEYEDVSRVEK VIDHSGARLGEYEDVS EDVSRVEKYTISQEAY R L G E K Y 0 1 0 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 1 2 0 0 12 1 1422.6991 K7EP07;K7EK42;Q99426 K7EP07 44 55 TBCB Tubulin-folding cofactor B yes no 2;3 4.7443E-155 199.19 By MS/MS By MS/MS 2 2 99857000 50326000 49531000 1730 1040 1855 4010;4011;4012;4013 3411;3412;3413;3414 3414 4216 4 LGFSLTPSK TADKLAIKLGFSLTPS GFSLTPSKGKTSGTTS K L G S K G 0 0 0 0 0 0 0 1 0 0 2 1 0 1 1 2 1 0 0 0 0 0 9 0 948.52803 P38432 P38432 298 306 COIL Coilin yes yes 2 0.020572 84.687 By MS/MS By matching 1 1 1069300 481420 587840 1731 1345 1856 4014;4015 3415 3415 3681 1 LGGAVPFAPPEVSPEQAK SCRPPPGKLGGAVPFA EVSPEQAKTVQGGRKN K L G A K T 3 0 0 0 0 1 2 2 0 0 1 1 0 1 4 1 0 0 0 2 0 0 18 0 1792.9359 A0A096LNZ0;A0A096LP25;Q6ZSR9 A0A096LNZ0 205 222 AAK1 Uncharacterized protein FLJ45252 yes no 2 0.0087558 53.924 By MS/MS By matching 1 1 3258800 1783300 1475500 1732 123 1857 4016;4017 3416 3416 168 1 LGGLRPESPESLTSVSR TPLRRSRRLGGLRPES ESLTSVSRTRRALVEF R L G S R T 0 2 0 0 0 0 2 2 0 0 3 0 0 0 2 4 1 0 0 1 0 0 17 1 1783.9428 Q9H6F5;H0YG79 Q9H6F5 11 27 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 3.0921E-18 114.28 By matching By MS/MS 2 2 100660000 52239000 48420000 1733 2009 1858 4018;4019;4020;4021 3417;3418 3417 2875 2 LGGPEGPGSPLLAT YRINLQMRLGGPEGPG PGSPLLAT________ R L G A T - 1 0 0 0 0 0 1 4 0 0 3 0 0 0 3 1 1 0 0 0 0 0 14 0 1264.6663 Q9C086 Q9C086 343 356 INO80B INO80 complex subunit B yes yes 2 0.0038142 67.879 By MS/MS By MS/MS 1 1 2446100 1305300 1140800 1734 1983 1859 4022;4023 3419;3420 3419 2822 2 LGLGHNQIR LRYSKLYRLGLGHNQI GLGHNQIRMIENGSLS R L G I R M 0 1 1 0 0 1 0 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 9 0 1006.5672 P21810 P21810 258 266 BGN Biglycan yes yes 2 0.015796 58.167 By MS/MS 1 267160 267160 0 1735 1303 1860 4024 3421 3421 184 0 LGLGTLSSSLSR ACCRDYQRLGLGTLSS TLSSSLSRAKSEPFRI R L G S R A 0 1 0 0 0 0 0 2 0 0 4 0 0 0 0 4 1 0 0 0 0 0 12 0 1189.6667 G5E933;O95248 G5E933 1134 1145 SBF1 Myotubularin-related protein 5 yes no 2 0.0038678 89.356 By matching By MS/MS 2 2 9386300 3862000 5524400 1736 806 1861 4025;4026;4027;4028 3422;3423 3423 3499 2 LGMLSPEGTCK NTSVQFLRLGMLSPEG LSPEGTCKAFDTAGNG R L G C K A 0 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 1 0 0 0 0 0 11 0 1191.5628 A0A0U1RQF0;P49327 A0A0U1RQF0 203 213 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 0.0060099 69.815 By matching By MS/MS 1 1 3023500 1366600 1656900 1737 261 1862 4029;4030 3424 3424 376 1 LGNAGDVCVPQASPR EGTSPGDRLGNAGDVC CVPQASPRRWRPKINW R L G P R R 2 1 1 1 1 1 0 2 0 0 1 0 0 0 2 1 0 0 0 2 0 0 15 0 1539.7464 Q9H0W5 Q9H0W5 249 263 CCDC8 Coiled-coil domain-containing protein 8 yes yes 2 4.8519E-05 92.773 By MS/MS By MS/MS 1 1 4432700 1891900 2540800 1738 1990 1863 4031;4032 3425;3426 3426 2843 2 LGSFEGLVNLTFIHLQHNR LTHNKITKLGSFEGLV FIHLQHNRLKEDAVSA K L G N R L 0 1 2 0 0 1 1 2 2 1 4 0 0 2 0 1 1 0 0 1 0 0 19 0 2194.1647 P51884 P51884 152 170 LUM Lumican yes yes 3;4 3.3846E-09 105.63 By MS/MS By matching 2 2 6452500 4777400 1675100 1739 1397 1864 4033;4034;4035;4036 3427;3428 3427 200 2 LGSFGSITR GDFLGRERLGSFGSIT GSFGSITRQQEGEASS R L G T R Q 0 1 0 0 0 0 0 2 0 1 1 0 0 1 0 2 1 0 0 0 0 0 9 0 936.50288 Q14315 Q14315 2231 2239 FLNC Filamin-C yes yes 2 0.018716 63.073 By MS/MS By matching 1 1 19197000 9693600 9503200 1740 1521 1865 4037;4038 3429 3429 2087 1 LGSGSNGLLR EEVSARLRLGSGSNGL SGSNGLLRRKVSIIET R L G L R R 0 1 1 0 0 0 0 3 0 0 3 0 0 0 0 2 0 0 0 0 0 0 10 0 972.53524 H7C1A0;Q9HC62 H7C1A0 38 47 SENP2 Sentrin-specific protease 2 yes no 2 0.0067035 73.9 By MS/MS By matching 1 1 1978700 968310 1010400 1741 955 1866 4039;4040 3430 3430 1280 1 LGSLSARSDSEATISR LAQPRRTRLGSLSARS DSEATISRSSASSRTA R L G S R S 2 2 0 1 0 0 1 1 0 1 2 0 0 0 0 5 1 0 0 0 0 0 16 1 1648.838 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1122 1137 CEP170 Centrosomal protein of 170 kDa yes no 2;3 0.0015527 66.965 By MS/MS By MS/MS 2 2 19795000 9442100 10353000 1742 815 1867 4041;4042;4043;4044 3431;3432;3433 3433 1087;1088;1089 3 LGSLVENNER LALQLAEKLGSLVENN SLVENNERVFDHKQGT K L G E R V 0 1 2 0 0 0 2 1 0 0 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1129.5728 Q99613;B5ME19 Q99613 863 872 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.011684 68.016 By MS/MS 1 0 0 0 1743 399 1868 4045 3434 3434 1 LGSSGLGSASSIQAAVR KKAKQTGRLGSSGLGS SSIQAAVRQLEAEADA R L G V R Q 3 1 0 0 0 1 0 3 0 1 2 0 0 0 0 5 0 0 0 1 0 0 17 0 1559.8267 Q7Z6Z7;H0Y659 Q7Z6Z7 3750 3766 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 2 0.0022895 69.729 By MS/MS By matching 2 2 6798900 3581000 3217800 1744 1721 1869 4046;4047;4048;4049 3435;3436 3435 2425;2426 2 LGSVDSFER GANRMRGRLGSVDSFE GSVDSFERSNSLASEK R L G E R S 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 9 0 1008.4876 O60343;Q5JU47 O60343 586 594 TBC1D4 TBC1 domain family member 4 yes no 2 0.00093369 94.465 By MS/MS By MS/MS 1 1 28123000 12266000 15856000 1745 1138 1870 4050;4051 3437;3438 3437 1514 2 LGSYSGPTSVSR AEGTRRDRLGSYSGPT SGPTSVSRQRVESLRK R L G S R Q 0 1 0 0 0 0 0 2 0 0 1 0 0 0 1 4 1 0 1 1 0 0 12 0 1209.599 V9GYZ0;Q9BZ23 V9GYZ0 64 75 PANK2 Pantothenate kinase 2, mitochondrial yes no 2 3.7062E-39 158.11 By MS/MS By MS/MS 1 1 14808000 7037600 7770500 1746 1980 1871 4052;4053 3439;3440;3441 3439 2814 3 LGTNMYSVNQPVETHVSGSSK LYGDRVLKLGTNMYSV THVSGSSKNLASWTQT K L G S K N 0 0 2 0 0 1 1 2 1 0 1 1 1 0 1 4 2 0 1 3 0 0 21 0 2234.0637 H7C0S2;C9JF58;Q8WVF1 H7C0S2 216 236 OSCP1 Protein OSCP1 yes no 3 0.0025747 57.278 By matching By MS/MS 1 1 17815000 7816700 9998400 1747 461 1872 4054;4055 3442 3442 67;366 650;3370 1 LGVSVSPSR RSKSPKKKLGVSVSPS GVSVSPSRARRRRKTS K L G S R A 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 3 0 0 0 2 0 0 9 0 900.50288 E7ERS3;Q86VM9;H3BP01 E7ERS3 553 561 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.0023731 91.313 By MS/MS By MS/MS 1 1 67611000 34817000 32794000 1748 579 1873 4056;4057 3443;3444;3445;3446 3443 773;774 4 LHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALR EEIAFLKKLHEEEIQE PDLTAALRDVRQQYES K L H L R D 3 1 0 3 0 6 5 0 2 3 4 1 0 0 1 1 1 0 0 3 0 0 34 1 3922.0072 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 237 270 VIM Vimentin yes no 4 0.00017014 47.822 By MS/MS By MS/MS 1 2 19666000 8312600 11353000 1749 1243 1874 4058;4059;4060 3447;3448;3449 3448 2 LHMTIFSQSVSPCGK EVFQALQRLHMTIFSQ QSVSPCGKFLAAGNNY R L H G K F 0 0 0 0 1 1 0 1 1 1 1 1 1 1 1 3 1 0 0 1 0 0 15 0 1690.8171 Q86W42 Q86W42 23 37 THOC6 THO complex subunit 6 homolog yes yes 2 0.01592 42.314 By MS/MS By matching 1 1 1417400 673170 744190 1750 1733 1875 4061;4062 3450 3450 255 2441;3842 1 LHPDGSPDVAGEK RLNVKAQKLHPDGSPD SPDVAGEKGIQKIPSG K L H E K G 1 0 0 2 0 0 1 2 1 0 1 1 0 0 2 1 0 0 0 1 0 0 13 0 1320.631 Q7Z2Z1 Q7Z2Z1 594 606 TICRR Treslin yes yes 2 0.0058493 66.19 By matching By MS/MS 1 1 3617100 1810800 1806300 1751 1710 1876 4063;4064 3451 3451 2391 1 LHQLSGSDQLESTAHSR MEHLERTKLHQLSGSD LESTAHSRIRKERPIS K L H S R I 1 1 0 1 0 2 1 1 2 0 3 0 0 0 0 4 1 0 0 0 0 0 17 0 1864.9028 A0A087X2D8;O60271 A0A087X2D8 179 195 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 3 0.012621 46.953 By matching By MS/MS 1 1 3361200 1179500 2181700 1752 115 1877 4065;4066 3452 3452 150 1 LHRIETDEEESCDNAHGDANQPAR EGKPSRKRLHRIETDE GDANQPARDSQPRVLP R L H A R D 3 2 2 3 1 1 4 1 2 1 1 0 0 0 1 1 1 0 0 0 0 0 24 1 2763.1903 Q96T23 Q96T23 1300 1323 RSF1 Remodeling and spacing factor 1 yes yes 4 0.0019592 53.188 By MS/MS By MS/MS 1 1 15194000 6878800 8314900 1753 1933 1878 4067;4068 3453;3454 3454 3898 2 LHSVNSPQSPDK L H D K 0 0 1 1 0 1 0 0 1 0 1 1 0 0 2 3 0 0 0 1 0 0 12 0 1307.647 REV__D6RGZ3 yes no 2 0.012926 65.465 By MS/MS By matching 1 1 25018000 11815000 13203000 + 1754 2194 1879 4069;4070 3455 3455 3182 1 LHVGNISPTCTNK NKSKTSTKLHVGNISP ISPTCTNKELRAKFEE K L H N K E 0 0 2 0 1 0 0 1 1 1 1 1 0 0 1 1 2 0 0 1 0 0 13 0 1439.7191 Q9BWF3;D6R9K7;J3QRR5;E9PB51 Q9BWF3 80 92 RBM4 RNA-binding protein 4 yes no 3 0.0027108 67.648 By MS/MS By matching 1 1 3305700 1729400 1576300 1755 1968 1880 4071;4072 3456 3456 2789 1 LHVGNISPTCTNQELR NKSKASTKLHVGNISP TCTNQELRAKFEEYGP K L H L R A 0 1 2 0 1 1 1 1 1 1 2 0 0 0 1 1 2 0 0 1 0 0 16 0 1837.9105 E9PLB0;E9PM61;U3KQD5;Q9BQ04 E9PLB0 80 95 RBM4B RNA-binding protein 4B yes no 3 0.0096459 49.482 By matching By MS/MS 1 1 1334300 695290 639000 1756 661 1881 4073;4074 3457 3457 895 1 LIALLEVLSQK TDLSDGLRLIALLEVL LLEVLSQKKMHRKHNQ R L I Q K K 1 0 0 0 0 1 1 0 0 1 4 1 0 0 0 1 0 0 0 1 0 0 11 0 1225.7646 O75369;F8WE98;Q5HY54;Q60FE5;P21333;A0A087WWY3;Q14315 Q5HY54 77 87 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C no no 2 2.0413E-05 96.89 By MS/MS 1 1535800 0 1535800 1757 1302;1158;1521 1882 4075 3458 3458 0 LIAPVAEEEATVPNNK ________________ EATVPNNKITVVGVGQ K L I N K I 3 0 2 0 0 0 3 0 0 1 1 1 0 0 2 0 1 0 0 2 0 0 16 0 1693.8887 A8MW50;P07195;F5H793;C9J7H8 A8MW50 8 23 LDHB L-lactate dehydrogenase;L-lactate dehydrogenase B chain yes no 2 0.0012072 80.17 By MS/MS By MS/MS 1 1 6467500 2441000 4026500 1758 340 1883 4076;4077 3459;3460 3459 1 LIDLESPTPESQK TIEEDLKKLIDLESPT SPTPESQKSFKFHALS K L I Q K S 0 0 0 1 0 1 2 0 0 1 2 1 0 0 2 2 1 0 0 0 0 0 13 0 1455.7457 O43166;F5GYF8 O43166 1544 1556 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 0.00063529 90.793 By MS/MS By MS/MS 1 1 9024100 4584700 4439400 1759 1114 1884 4078;4079 3461;3462 3462 1482 2 LIEDNEYTAR IADFGLARLIEDNEYT EDNEYTARQGAKFPIK R L I A R Q 1 1 1 1 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1222.583 P06241;Q573B4;J3QRU1;P06239;P07947;P12931 P06241 414 423 FYN;LCK;YES1;SRC Tyrosine-protein kinase Fyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lck;Tyrosine-protein kinase Yes;Proto-oncogene tyrosine-protein kinase Src no no 2 3.2043E-29 158.76 By MS/MS By MS/MS 1 1 81475000 39829000 41647000 1760 1224;1266 1885 4080;4081 3463;3464 3463 4258 2 LIESLSPDFCHQNK LNKANRKKLIESLSPD PDFCHQNKGLLLTVNT K L I N K G 0 0 1 1 1 1 1 0 1 1 2 1 0 1 1 2 0 0 0 0 0 0 14 0 1686.8036 Q9H6R7 Q9H6R7 463 476 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes yes 3 0.02061 45.28 By MS/MS 1 371470 0 371470 1761 2011 1886 4082 3465 3465 2878 1 LINGVRSPQTRQAGQTR IFNFTADRLINGVRSP TRQAGQTRTRIQNPSA R L I T R T 1 3 1 0 0 3 0 2 0 1 1 0 0 0 1 1 2 0 0 1 0 0 17 2 1881.0293 H0Y4V9;Q92615 H0Y4V9 11 27 LARP4B La-related protein 4B yes no 3 0.012984 42.639 By MS/MS 1 4696200 0 4696200 1762 827 1887 4083 3466 3466 3506;3507 1 LINNNKKNCR TGRYHHTRLINNNKKN NNNKKNCRDKVFLCCP R L I C R D 0 1 4 0 1 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 10 2 1272.6721 A2A2Q9 A2A2Q9 378 387 AAR2 yes yes 2 0.017137 54.549 By MS/MS 1 807150 807150 0 1763 315 1888 4084 3467 3467 1 LIPGPLSPVAR SKEPLKEKLIPGPLSP GPLSPVARGGSNGGSN K L I A R G 1 1 0 0 0 0 0 1 0 1 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1118.6812 P48634 P48634 1213 1223 PRRC2A Protein PRRC2A yes yes 2 0.0048922 73.466 By MS/MS By MS/MS 1 1 67589000 28851000 38738000 1764 1373 1889 4085;4086 3468;3469 3469 1831 2 LIRGPGENGDDS GGKRGHKRLIRGPGEN PGENGDDS________ R L I D S - 0 1 1 2 0 0 1 3 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1228.5684 Q6IBS0 Q6IBS0 338 349 TWF2 Twinfilin-2 yes yes 2 7.5038E-05 73.781 By MS/MS By MS/MS 2 2 4334100 2769100 1565000 1765 1666 1890;1891 4087;4088;4089;4090 3470;3471;3472 3472 226 2328 2 LISQGTIEESMLK TKEVLVIKLISQGTIE TIEESMLKINQQKLKL K L I L K I 0 0 0 0 0 1 2 1 0 2 2 1 1 0 0 2 1 0 0 0 0 0 13 0 1447.7592 Q9H4L7 Q9H4L7 977 989 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes yes 2 0.013231 44.193 By matching By MS/MS 1 1 4987000 2278600 2708400 1766 2007 1892 4091;4092 3473 3473 290 3926 1 LISQIVSSITASLR PTYTNLNRLISQIVSS SSITASLRFDGALNVD R L I L R F 1 1 0 0 0 1 0 0 0 3 2 0 0 0 0 4 1 0 0 1 0 0 14 0 1486.8719 P68363;F5H5D3;Q9BQE3;F8VVB9;P68366;C9J2C0;Q9NY65;C9JDS9;Q9H853 P68363 230 243 TUBA1B;TUBA1C;TUBA4A;TUBA8;TUBA4B Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-8 chain;Putative tubulin-like protein alpha-4B yes no 2 1.1525E-11 93.345 By MS/MS 1 0 0 0 1767 1439 1893 4093 3474 3474 1 LIVENLSSR PPVRTEYRLIVENLSS IVENLSSRCSWQDLKD R L I S R C 0 1 1 0 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 9 0 1029.5819 Q13247;B4DJK0;B4DUA4;A0A0D9SEM4;Q13243;Q08170 Q13247 112 120 SRSF6;SRSF5;SRSF4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5;Serine/arginine-rich splicing factor 4 yes no 2 0.0022235 104.43 By MS/MS 1 926350 926350 0 1768 1497 1894 4094 3475 3475 2047 1 LKATVTPSPVK EKKMPKPRLKATVTPS TVTPSPVKGKGKVGRP R L K V K G 1 0 0 0 0 0 0 0 0 0 1 2 0 0 2 1 2 0 0 2 0 0 11 1 1139.6914 Q9H1E3 Q9H1E3 174 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 7.3506E-11 139.77 By MS/MS By MS/MS 2 1 147680000 86957000 60723000 1769 1992 1895;1896 4095;4096;4097 3476;3477;3478;3479;3480;3481 3479 2845;3922 6 LKATVTPSPVKGK EKKMPKPRLKATVTPS TPSPVKGKGKVGRPTA R L K G K G 1 0 0 0 0 0 0 1 0 0 1 3 0 0 2 1 2 0 0 2 0 0 13 2 1324.8078 Q9H1E3 Q9H1E3 174 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 6.5032E-10 123.76 By MS/MS By MS/MS 3 4 68793000 40267000 28526000 1770 1992 1897;1898 4098;4099;4100;4101;4102;4103;4104 3482;3483;3484;3485;3486 3486 2845;3922 5 LKDLFDYSPPLHK PEQVKSEKLKDLFDYS DYSPPLHKNLDAREKS K L K H K N 0 0 0 2 0 0 0 0 1 0 3 2 0 1 2 1 0 0 1 0 0 0 13 1 1571.8348 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 505 517 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 1.9503E-16 138.77 By MS/MS By MS/MS 2 2 73662000 8859300 64803000 1771 2073 1899 4105;4106;4107;4108 3487;3488;3489;3490;3491;3492 3492 2968 6 LKDLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI KILSLKNKLKDLGHPV PGKDLDHI________ K L K H I - 0 0 0 9 0 1 9 3 2 1 4 2 0 0 2 2 0 0 0 1 0 0 36 2 4076.7254 O60763 O60763 927 962 USO1 General vesicular transport factor p115 yes yes 4 2.1258E-07 59.818 By MS/MS 1 6747400 0 6747400 1772 1144 1900 4109 3493 3493 1524 1 LKDSILSI RKCLHSIKLKDSILSI LKDSILSI________ K L K S I - 0 0 0 1 0 0 0 0 0 2 2 1 0 0 0 2 0 0 0 0 0 0 8 1 887.53278 H0YBS5 H0YBS5 243 250 SPAG9 yes yes 2 0.010526 61.78 By MS/MS 1 0 0 0 1773 868 1901 4110 3494 3494 1163;1164 1 LKEDAVSAAFK FIHLQHNRLKEDAVSA DAVSAAFKGLKSLEYL R L K F K G 3 0 0 1 0 0 1 0 0 0 1 2 0 1 0 1 0 0 0 1 0 0 11 1 1177.6343 P51884 P51884 171 181 LUM Lumican yes yes 3 0.021975 40.015 By MS/MS 1 430100 430100 0 1774 1397 1902 4111 3495 3495 1 LKGMKDDDYDDQLC FEDFARLRLKGMKDDD DDYDDQLC________ R L K L C - 0 0 0 5 1 1 0 1 0 0 2 2 1 0 0 0 0 0 1 0 0 0 14 2 1714.7178 Q68DZ5;P32121 Q68DZ5 204 217 DKFZp686L0365;ARRB2 Beta-arrestin-2 yes no 2 0.0065206 54.259 By MS/MS By MS/MS 1 1 11722000 5081200 6640400 1775 1333 1903 4112;4113 3496;3497 3497 4283 2 LKGQEDSLASAVDAATEQKTCDSD IAELIRERLKGQEDSL EQKTCDSD________ R L K S D - 4 0 0 4 1 2 2 1 0 0 2 2 0 0 0 3 2 0 0 1 0 0 24 2 2538.1392 J3KR35;Q8WUD4 J3KR35 156 179 CCDC12 Coiled-coil domain-containing protein 12 yes no 3 0.00053679 65.899 By matching By MS/MS 1 1 18221000 10647000 7573200 1776 1011 1904 4114;4115 3498 3498 1346 1 LKLSPSPSSR LLEGEEERLKLSPSPS LSPSPSSRVTVSRASS R L K S R V 0 1 0 0 0 0 0 0 0 0 2 1 0 0 2 4 0 0 0 0 0 0 10 1 1070.6084 P20700;Q03252 P20700 388 397 LMNB1;LMNB2 Lamin-B1;Lamin-B2 no no 2 0.0086075 84.821 By MS/MS By MS/MS 2 2 79917000 39535000 40382000 1777 1300;1460 1905;1906 4116;4117;4118;4119 3499;3500;3501 3499 1708;1709 3 LKPGGVGAPSSSSPSPSPSAR RQLEEEQKLKPGGVGA PSPSPSARPGPPPSEE K L K A R P 2 1 0 0 0 0 0 3 0 0 1 1 0 0 5 7 0 0 0 1 0 0 21 1 1921.9858 Q92797 Q92797 1159 1179 SYMPK Symplekin yes yes 3 0.0011486 76.471 By MS/MS By MS/MS 2 2 14822000 8215900 6606100 1778 1862 1907 4120;4121;4122;4123 3502;3503;3504 3503 2631;2632 3 LKQFQKSYPEVYQER SNKEKKKKLKQFQKSY YPEVYQERFPTPESAA K L K E R F 0 1 0 0 0 3 2 0 0 0 1 2 0 1 1 1 0 0 2 1 0 0 15 2 1941.9949 Q8WUY9 Q8WUY9 474 488 DEPDC1B DEP domain-containing protein 1B yes yes 3 0.019512 43.761 By MS/MS 1 1155500 0 1155500 1779 1835 1908 4124 3505 3505 4400 0 LKSDERPVHIK FIQPRRKRLKSDERPV DERPVHIK________ R L K I K - 0 1 0 1 0 0 1 0 1 1 1 2 0 0 1 1 0 0 0 1 0 0 11 2 1320.7514 H0Y612;Q9UPN9 H0Y612 878 888 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 2;3 0.016371 68.515 By MS/MS By MS/MS 2 2 18407000 11303000 7104200 1780 835 1909 4125;4126;4127;4128 3506;3507 3506 1124 1 LKSEDGVEGDLGETQSR YTTKIKPRLKSEDGVE DLGETQSRTITVTRRV R L K S R T 0 1 0 2 0 1 3 3 0 0 2 1 0 0 0 2 1 0 0 1 0 0 17 1 1818.8595 Q09666 Q09666 133 149 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2;3 0.0008829 84.403 By MS/MS By MS/MS 2 2 21678000 10259000 11420000 1781 1474 1910 4129;4130;4131;4132 3508;3509 3509 1994 2 LLAQAEGEPCYIR RVPVCHLRLLAQAEGE EGEPCYIRDSGVAPTD R L L I R D 2 1 0 0 1 1 2 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 13 0 1518.7501 H0YE41;E9PPF2;E9PM19;P29597 H0YE41 61 73 TYK2 Tyrosine-protein kinase;Non-receptor tyrosine-protein kinase TYK2 yes no 2 0.00032021 77.379 By MS/MS By MS/MS 1 1 5859800 2505900 3353900 1782 665 1911 4133;4134 3510;3511 3510 4156 2 LLASSPALPSSGAQAR GPPVGEPRLLASSPAL PSSGAQARLTRAPGPP R L L A R L 4 1 0 0 0 1 0 1 0 0 3 0 0 0 2 4 0 0 0 0 0 0 16 0 1524.826 Q9NYZ3 Q9NYZ3 164 179 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.0069571 57.019 By MS/MS By matching 1 1 4597000 2054300 2542800 1783 2074 1912 4135;4136 3512 3512 2981;2982 1 LLDEEEATDNDLR EILDESLRLLDEEEAT EATDNDLRAKFKERWQ R L L L R A 1 1 1 3 0 0 3 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 13 0 1531.7002 Q8WUM4 Q8WUM4 457 469 PDCD6IP Programmed cell death 6-interacting protein yes yes 2 0.0059794 69.01 By matching By MS/MS 1 1 1068500 593900 474570 1784 1834 1913 4137;4138 3513 3513 1 LLDIDETEYHADGGKVPIK ITDFGLARLLDIDETE DGGKVPIKWMALESIL R L L I K W 1 0 0 3 0 0 2 2 1 2 2 2 0 0 1 0 1 0 1 1 0 0 19 1 2112.0739 B4DTR1;J3QLU9;P04626 B4DTR1 593 611 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 yes no 3 0.0092024 50.653 By MS/MS By MS/MS 1 1 2987300 815980 2171300 1785 379 1914 4139;4140 3514;3515 3514 4092 2 LLEASKAGDLETVKQLCSSQNVNCR RTSDVDYRLLEASKAG SSQNVNCRDLEGRHST R L L C R D 2 1 2 1 2 2 2 1 0 0 4 2 0 0 0 3 1 0 0 2 0 0 25 2 2819.3906 E7EQ52;O95271 E7EQ52 417 441 TNKS Tankyrase-1 yes no 3 0.0020219 52.853 By MS/MS By matching 1 1 93712000 69306000 24406000 1786 573 1915 4141;4142 3516 3516 90;91;374 3412 1 LLEDSEESSEETVSR LEKNRSYRLLEDSEES SSEETVSRAGSSLQKK R L L S R A 0 1 0 1 0 0 5 0 0 0 2 0 0 0 0 4 1 0 0 1 0 0 15 0 1708.7639 A2AB15;A0A140T947;O60231 A2AB15 39 53 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 2 9.8023E-18 130.01 By MS/MS By MS/MS 2 2 39362000 18442000 20920000 1787 280 1916;1917 4143;4144;4145;4146 3517;3518;3519 3518 398;399 3 LLELKSPTELMK HSNVHSDRLLELKSPT KSPTELMKSKERSDVE R L L M K S 0 0 0 0 0 0 2 0 0 0 4 2 1 0 1 1 1 0 0 0 0 0 12 1 1400.7949 Q5VT06;H0Y7F7 Q5VT06 2455 2466 CEP350 Centrosome-associated protein 350 yes no 2 0.0041611 67.952 By MS/MS By matching 1 1 1162700 567760 594970 1788 1643 1918 4147;4148 3520 3520 240 3808 1 LLEQEALMEQQDPKSPSHK QEQALMEKLLEQEALM DPKSPSHKSKRQQQEL K L L H K S 1 0 0 1 0 3 3 0 1 0 3 2 1 0 2 2 0 0 0 0 0 0 19 1 2207.0892 Q96PY5;C9IZY8 Q96PY5 1002 1020 FMNL2 Formin-like protein 2 yes no 3 0.004255 55.127 By MS/MS By MS/MS 1 1 3394400 1556000 1838400 1789 1920 1919 4149;4150 3521;3522 3522 2714 2 LLFSNESEK MKPAKDLRLLFSNESE LFSNESEKPTTNSYLM R L L E K P 0 0 1 0 0 0 2 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 9 0 1065.5342 Q8WYL5 Q8WYL5 791 799 SSH1 Protein phosphatase Slingshot homolog 1 yes yes 2 0.0087372 77.923 By matching By MS/MS 1 1 2712000 1030800 1681200 1790 1844 1920 4151;4152 3523 3523 2593;2594 0 LLIDPNCSGHSPR KGSFSKGRLLIDPNCS NCSGHSPRTARHAPAV R L L P R T 0 1 1 1 1 0 0 1 1 1 2 0 0 0 2 2 0 0 0 0 0 0 13 0 1464.7143 C9JSD5;Q8WYQ5 C9JSD5 85 97 DGCR8 Microprocessor complex subunit DGCR8 yes no 2;3 0.00030188 97.69 By MS/MS By MS/MS 2 2 4410800 1939100 2471600 1791 478 1921 4153;4154;4155;4156 3524;3525;3526 3524 667 3 LLIHQSLAGGIIGVK SDFDCELRLLIHQSLA AGGIIGVKGAKIKELR R L L V K G 1 0 0 0 0 1 0 3 1 3 3 1 0 0 0 1 0 0 0 1 0 0 15 0 1517.9293 P61978;Q5T6W2 P61978 149 163 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 0.0032318 61.732 By MS/MS 1 305870 305870 0 1792 1423 1922 4157 3527 3527 1 LLIYAVLPTGDVIGDSAK SDIAPVARLLIYAVLP DVIGDSAKYDVENCLA R L L A K Y 2 0 0 2 0 0 0 2 0 2 3 1 0 0 1 1 1 0 1 2 0 0 18 0 1844.0295 P01023 P01023 540 557 A2M Alpha-2-macroglobulin yes yes 2 1.1035E-05 96.756 By MS/MS By MS/MS 1 1 9697000 5769200 3927700 1793 1206 1923 4158;4159 3528;3529 3529 2 LLKEGEEPTVYSDEEEPKDESAR FKYHHVGKLLKEGEEP EPKDESARKND_____ K L L A R K 1 1 0 2 0 0 7 1 0 0 2 2 0 0 2 2 1 0 1 1 0 0 23 2 2649.2294 O00264 O00264 170 192 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3;4 0.00043742 71.524 By MS/MS By MS/MS 2 2 170900000 74592000 96309000 1794 1080 1924 4160;4161;4162;4163 3530;3531;3532;3533 3533 1421;4224 4 LLLAADPGGSPAQR CPPHPTARLLLAADPG PGGSPAQRRRTRGTPP R L L Q R R 3 1 0 1 0 1 0 2 0 0 3 0 0 0 2 1 0 0 0 0 0 0 14 0 1364.7412 Q5SQI0 Q5SQI0 306 319 ATAT1 Alpha-tubulin N-acetyltransferase 1 yes yes 2 0.0043808 66.19 By matching By MS/MS 1 1 997050 538090 458960 1795 1616 1925 4164;4165 3534 3534 2244 1 LLLAEDSEEEVDFLSER QGETQPQRLLLAEDSE EVDFLSERRMVKKSRT R L L E R R 1 1 0 2 0 0 5 0 0 0 4 0 0 1 0 2 0 0 0 1 0 0 17 0 1992.9528 Q14676 Q14676 162 178 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 0.0017035 77.562 By MS/MS By MS/MS 1 1 8769500 5345800 3423700 1796 1523 1926 4166;4167 3535;3536 3535 2092 2 LLLAEDSEEEVDFLSERR QGETQPQRLLLAEDSE VDFLSERRMVKKSRTT R L L R R M 1 2 0 2 0 0 5 0 0 0 4 0 0 1 0 2 0 0 0 1 0 0 18 1 2149.0539 Q14676 Q14676 162 179 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.0091946 53.403 By MS/MS 1 0 0 0 1797 1523 1927 4168 3537 3537 2092 1 LLLTTNNSGLEK ENESKSSKLLLTTNNS TNNSGLEKTEAITPRD K L L E K T 0 0 2 0 0 0 1 1 0 0 4 1 0 0 0 1 2 0 0 0 0 0 12 0 1301.7191 Q86VW1 Q86VW1 553 564 SLC22A16 Solute carrier family 22 member 16 yes yes 2 0.015596 43.635 By MS/MS 1 0 0 0 1798 1732 1928 4169 3538 3538 241;242 2440;3841 1 LLNLQDSDSEECTSR RLQCFQPRLLNLQDSD DSEECTSRKPGQTVNN R L L S R K 0 1 1 2 1 1 2 0 0 0 3 0 0 0 0 3 1 0 0 0 0 0 15 0 1765.7789 Q52LR7 Q52LR7 532 546 EPC2 Enhancer of polycomb homolog 2 yes yes 2 0.0039143 61.958 By MS/MS By matching 1 1 4506600 1994300 2512400 1799 1592 1929 4170;4171 3539 3539 2208 1 LLPEGEETLESDDEKDEHTSK PQNAKKARLLPEGEET EKDEHTSKKRKVEPGE R L L S K K 0 0 0 3 0 0 6 1 1 0 3 2 0 0 1 2 2 0 0 0 0 0 21 1 2400.0816 Q8N6N3 Q8N6N3 148 168 C1orf52 UPF0690 protein C1orf52 yes yes 4 0.012342 41.513 By MS/MS 1 6652000 6652000 0 1800 1781 1930 4172 3540 3540 2504 1 LLPPASP LLQRLKNRLLPPASP_ RLLPPASP________ R L L S P - 1 0 0 0 0 0 0 0 0 0 2 0 0 0 3 1 0 0 0 0 0 0 7 0 693.40613 Q9Y4R8 Q9Y4R8 831 837 TELO2 Telomere length regulation protein TEL2 homolog yes yes 1 0.0084705 62.659 By MS/MS By MS/MS 1 1 2609900 1189400 1420500 1801 2162 1931 4173;4174 3541;3542 3541 3141 2 LLQAQGVEVPSKDSLPK ARAEATLKLLQAQGVE PSKDSLPKKRPIYEDK K L L P K K 1 0 0 1 0 2 1 1 0 0 3 2 0 0 2 2 0 0 0 2 0 0 17 1 1808.0044 A0A087WUT6;O60841 A0A087WUT6 425 441 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.00096514 81.003 By matching By MS/MS 1 1 1816000 779980 1036000 1802 43 1932 4175;4176 3543 3543 53 1 LLQDSSSPVDLAK EKHKILHRLLQDSSSP SSPVDLAKLTAEATGK R L L A K L 1 0 0 2 0 1 0 0 0 0 3 1 0 0 1 3 0 0 0 1 0 0 13 0 1371.7246 E7EWM1;Q15596 E7EWM1 693 705 NCOA2 Nuclear receptor coactivator 2 yes no 2 5.0978E-22 144.51 By MS/MS By MS/MS 1 1 4978100 1853400 3124700 1803 601 1933 4177;4178 3544;3545;3546 3545 825 3 LLQDSVDFSLADAINTEFK RSSVPGVRLLQDSVDF DAINTEFKNTRTNEKV R L L F K N 2 0 1 3 0 1 1 0 0 1 3 1 0 2 0 2 1 0 0 1 0 0 19 0 2125.0579 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 79 97 VIM Vimentin yes no 3 1.8598E-70 155.88 By MS/MS By MS/MS 1 1 9155300 5308400 3846900 1804 1243 1934 4179;4180 3547;3548;3549 3548 3 LLQDSVDFSLADAINTEFKNTR RSSVPGVRLLQDSVDF NTEFKNTRTNEKVELQ R L L T R T 2 1 2 3 0 1 1 0 0 1 3 1 0 2 0 2 2 0 0 1 0 0 22 1 2496.2496 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 79 100 VIM Vimentin yes no 3 0.00053077 76.78 By MS/MS By MS/MS 1 1 10829000 6469800 4359100 1805 1243 1935 4181;4182 3550;3551 3550 2 LLQNVNDTLSR KCQGSAQKLLQNVNDT NVNDTLSRSWAVKLET K L L S R S 0 1 2 1 0 1 0 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 11 0 1271.6834 O00635 O00635 244 254 TRIM38 E3 ubiquitin-protein ligase TRIM38 yes yes 2 0.012636 71.501 By MS/MS 1 758360 0 758360 1806 1090 1936 4183 3552 3552 149 1 LLQTCFSSPADDSMDR EELEFCEKLLQTCFSS PADDSMDR________ K L L D R - 1 1 0 3 1 1 0 0 0 0 2 0 1 1 1 3 1 0 0 0 0 0 16 0 1841.7924 Q9NZL4 Q9NZL4 347 362 HSPBP1 Hsp70-binding protein 1 yes yes 2 0.021592 48.351 By matching By MS/MS 1 1 2060700 831890 1228800 1807 2079 1937 4184;4185 3553 3553 2987 1 LLSASQLSAEEEEEKQAE MKWKKESKLLSASQLS EEEEKQAE________ K L L A E - 3 0 0 0 0 2 6 0 0 0 3 1 0 0 0 3 0 0 0 0 0 0 18 1 1989.9379 P17509 P17509 207 224 HOXB6 Homeobox protein Hox-B6 yes yes 2 0.021624 54.004 By MS/MS By matching 1 1 11763000 6764800 4998500 1808 1283 1938 4186;4187 3554 3554 1682 1 LLSESAQPLK PYPYPSKKLLSESAQP SESAQPLKKVEEEQEA K L L L K K 1 0 0 0 0 1 1 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 0 1084.6128 Q9H3N1 Q9H3N1 224 233 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.007012 71.03 By matching By MS/MS 1 1 643330 356850 286480 1809 2002 1939 4188;4189 3555 3555 2865 1 LLSLYGTSLSQSDIR VLHNPHLKLLSLYGTS SLSQSDIRHLCETLKH K L L I R H 0 1 0 1 0 1 0 1 0 1 4 0 0 0 0 4 1 0 1 0 0 0 15 0 1651.8781 Q7RTR0 Q7RTR0 689 703 NLRP9 NACHT, LRR and PYD domains-containing protein 9 yes yes 3 0.01017 42.568 By MS/MS By matching 1 1 9389100 8781400 607730 1810 1707 1940 4190;4191 3556 3556 2386;2387;2388 1 LLSPACPAPK RVGCADSRLLSPACPA SPACPAPKEVTAAPAV R L L P K E 2 0 0 0 1 0 0 0 0 0 2 1 0 0 3 1 0 0 0 0 0 0 10 0 1052.5689 A0A0A0MSJ8;T1ECW5;O75170 A0A0A0MSJ8 471 480 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 2 0.0046902 82.426 By matching By MS/MS 1 1 1388100 709970 678090 1811 163 1941 4192;4193 3557 3557 222 1 LLSPLSSAR KAFQLKSRLLSPLSSA LSPLSSARLPPEPGLS R L L A R L 1 1 0 0 0 0 0 0 0 0 3 0 0 0 1 3 0 0 0 0 0 0 9 0 942.54983 A0A087WZ13;E9PAU2 A0A087WZ13 565 573 RAVER1 yes no 2 0.0016885 100.88 By MS/MS By MS/MS 1 1 28432000 14767000 13665000 1812 86 1942 4194;4195 3558;3559 3559 107 2 LLSPQQPALQR TSSLTDPRLLSPQQPA PQQPALQRNSVSPGLP R L L Q R N 1 1 0 0 0 3 0 0 0 0 3 0 0 0 2 1 0 0 0 0 0 0 11 0 1249.7143 Q14814 Q14814 178 188 MEF2D Myocyte-specific enhancer factor 2D yes yes 2 0.0011524 99.522 By MS/MS By MS/MS 1 1 1886000 1015600 870410 1813 1530 1943 4196;4197 3560;3561 3561 2108 2 LLSSSLTADCSLR EEEDEQVRLLSSSLTA LTADCSLRSPSGREVE R L L L R S 1 1 0 1 1 0 0 0 0 0 4 0 0 0 0 4 1 0 0 0 0 0 13 0 1421.7184 Q147X3 Q147X3 186 198 NAA30 N-alpha-acetyltransferase 30 yes yes 2 0.0085194 61.11 By MS/MS By MS/MS 1 1 1600200 575660 1024500 1814 1529 1944 4198;4199 3562;3563 3562 2104;2105 2 LLSSSLTADCSLRSPSGR EEEDEQVRLLSSSLTA SLRSPSGREVEPGEDR R L L G R E 1 2 0 1 1 0 0 1 0 0 4 0 0 0 1 6 1 0 0 0 0 0 18 1 1905.9578 Q147X3 Q147X3 186 203 NAA30 N-alpha-acetyltransferase 30 yes yes 3 0.021911 42.813 By matching By MS/MS 1 1 2417500 1090000 1327500 1815 1529 1945 4200;4201 3564 3564 2104;2105;2106 1 LLSTDAEAVSTR DVEKEVKRLLSTDAEA DAEAVSTRWEIIAEDE R L L T R W 2 1 0 1 0 0 1 0 0 0 2 0 0 0 0 2 2 0 0 1 0 0 12 0 1261.6514 Q15545 Q15545 169 180 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 2 0.0066509 66.004 By MS/MS By MS/MS 1 1 2686500 1528500 1158000 1816 1559 1946 4202;4203 3565;3566 3566 2150 2 LLTPITTLTSEQIQK ELPSLEQKLLTPITTL LTSEQIQKLLASTRYP K L L Q K L 0 0 0 0 0 2 1 0 0 2 3 1 0 0 1 1 4 0 0 0 0 0 15 0 1684.9611 E7ENL6;P12111 E7ENL6 797 811 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0173 53.569 By MS/MS By matching 1 1 497150 274680 222470 1817 567 1947 4204;4205 3567 3567 1 LLTTGQVSSRSR RLANATKRLLTTGQVS GQVSSRSRVQVQKAFA R L L S R V 0 2 0 0 0 1 0 1 0 0 2 0 0 0 0 3 2 0 0 1 0 0 12 1 1303.7208 Q9BWW8 Q9BWW8 204 215 APOL6 Apolipoprotein L6 yes yes 4 0.012033 44.299 By MS/MS 1 1366000 0 1366000 1818 1970 1948 4206 3568 3568 2793;2794;2795 1 LLVVYPWTQR VGGEALGRLLVVYPWT VVYPWTQRFFESFGDL R L L Q R F 0 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 1 1 1 2 0 0 10 0 1273.7183 F8W6P5;E9PEW8;E9PFT6;P68871;P02042;A8MUF7;E9PBW4;CON__P02070;CON__Q3SX09;P69892;P69891;P02100 F8W6P5 32 41 HBB;HBD;HBE1;HBG2;HBG1 Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta;Hemoglobin subunit gamma-2;Hemoglobin subunit gamma-1;Hemoglobin subunit epsilon yes no 2 0.0091926 71.223 By MS/MS By MS/MS 1 1 2168100 1124300 1043800 + 1819 618 1949 4207;4208 3569;3570 3569 2 LLYEIQNR KQAIEESRLLYEIQNR LLYEIQNRDEQAFPAL R L L N R D 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 8 0 1047.5713 Q01804 Q01804 458 465 OTUD4 OTU domain-containing protein 4 yes yes 2 0.012047 66.429 By MS/MS 1 494900 0 494900 1820 1452 1950 4209 3571 3571 4327 1 LMFKTEGPDSD QSTSRHKKLMFKTEGP KTEGPDSD________ K L M S D - 0 0 0 2 0 0 1 1 0 0 1 1 1 1 1 1 1 0 0 0 0 0 11 1 1238.5489 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 224 234 TP53 Cellular tumor antigen p53 yes no 2 7.0096E-06 126.34 By MS/MS By MS/MS 3 3 117160000 54253000 62907000 1821 93 1951;1952 4210;4211;4212;4213;4214;4215 3572;3573;3574;3575;3576;3577 3577 13 117 6 LMHNASDSEVDQDDVVEWK HLTEEPTKLMHNASDS QDDVVEWKDGASPSES K L M W K D 1 0 1 4 0 1 2 0 1 0 1 1 1 0 0 2 0 1 0 3 0 0 19 0 2215.9692 Q9H2P0 Q9H2P0 948 966 ADNP Activity-dependent neuroprotector homeobox protein yes yes 3 0.013053 46.065 By MS/MS By matching 1 1 2167000 933940 1233100 1822 2000 1953 4216;4217 3578 3578 2858;2859 1 LMLLLEVISGER EDFRDGLKLMLLLEVI LEVISGERLAKPERGK K L M E R L 0 1 0 0 0 0 2 1 0 1 4 0 1 0 0 1 0 0 0 1 0 0 12 0 1371.7796 G3V5M4;G3V2N5;A0A087WSZ2;P12814;P35609;Q08043;O43707 G3V5M4 42 53 ACTN1;ACTN3;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 yes no 2 2.6699E-20 142.98 By MS/MS By MS/MS 2 2 16183000 7369400 8813800 1823 21 1954;1955 4218;4219;4220;4221 3579;3580;3581;3582 3579 6 4 LMLSTSEYSQSPK SLTGDSCKLMLSTSEY SEYSQSPKMESLSSHR K L M P K M 0 0 0 0 0 1 1 0 0 0 2 1 1 0 1 4 1 0 1 0 0 0 13 0 1469.7072 Q12888;A6NNK5;C9JXV0 Q12888 515 527 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 7.791E-10 122.33 By MS/MS By MS/MS 1 1 3516100 1452100 2064100 1824 1481 1956 4222;4223 3583;3584 3583 2005 2 LMPGSVEK VLCKLINRLMPGSVEK LMPGSVEKFCLDPQTE R L M E K F 0 0 0 0 0 0 1 1 0 0 1 1 1 0 1 1 0 0 0 1 0 0 8 0 859.44734 Q15052 Q15052 48 55 ARHGEF6 Rho guanine nucleotide exchange factor 6 yes yes 2 0.0088703 86.67 By MS/MS 1 1779700 0 1779700 1825 1539 1957 4224 3585 3585 2122 1 LMSNLEEKQR KNNLLFQKLMSNLEEK SNLEEKQRSLQIMRQI K L M Q R S 0 1 1 0 0 1 2 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 10 1 1246.634 A0A1B0GVV6;A0A1B0GW51;A0A1B0GV15;A0A1B0GWI1;A0A1B0GTZ2 A0A1B0GVV6 38 47 yes no 2 0.020465 55.721 By MS/MS By matching 1 1 3266700 1323800 1942900 1826 291 1958 4225;4226 3586 3586 45 413 0 LMTGDTYTAHAGAK VADFGLSRLMTGDTYT YTAHAGAKFPIKWTAP R L M A K F 3 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 3 0 1 0 0 0 14 0 1435.6766 P42684;P00519 P42684 433 446 ABL2;ABL1 Abelson tyrosine-protein kinase 2;Tyrosine-protein kinase ABL1 yes no 2 4.32E-06 101.38 By MS/MS By matching 1 1 4065700 2305900 1759700 1827 1358 1959 4227;4228 3587 3587 179 3686 1 LNATASLEQER PQPQARSRLNATASLE TASLEQERSERPRAPG R L N E R S 2 1 1 0 0 1 2 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1230.6204 O76024 O76024 27 37 WFS1 Wolframin yes yes 2 1.7337E-05 120.59 By MS/MS By MS/MS 1 1 5796400 2729700 3066700 1828 1172 1960 4229;4230 3588;3589 3588 1564;3631 2 LNGPQDHSHLLYSTIPR RQKFSDLKLNGPQDHS LLYSTIPRMQEPGQIV K L N P R M 0 1 1 1 0 1 0 1 2 1 3 0 0 0 2 2 1 0 1 0 0 0 17 0 1946.9963 C9JZR2;O60716;E9PKL1 C9JZR2 85 101 CTNND1 Catenin delta-1 yes no 3 0.021357 42.348 By MS/MS 1 2588500 0 2588500 1829 495 1961 4231 3590 3590 683;3378 1 LNHSPPQSSSR REKKFSRRLNHSPPQS SPPQSSSRYRENRSRD R L N S R Y 0 1 1 0 0 1 0 0 1 0 1 0 0 0 2 4 0 0 0 0 0 0 11 0 1208.5898 A0A087X0H9;Q5T8P6 A0A087X0H9 124 134 RBM26 RNA-binding protein 26 yes no 2 0.00024691 107.93 By MS/MS By MS/MS 1 1 12359000 6458600 5900000 1830 98 1962 4232;4233 3591;3592;3593;3594 3592 126 4 LNHTEKLNQLENTFK LNVVETSRLNHTEKLN NQLENTFKSVIAQIGP R L N F K S 0 0 3 0 0 1 2 0 1 0 3 2 0 1 0 0 2 0 0 0 0 0 15 1 1827.9479 Q8NAT2 Q8NAT2 269 283 TDRD5 Tudor domain-containing protein 5 yes yes 3 0.0089656 57.106 By MS/MS 1 910050 0 910050 1831 1789 1963 4234 3595 3595 249;250;251;433 3858 0 LNHVAAGLVSPSLK LMSTVDPKLNHVAAGL GLVSPSLKSDTSSKEI K L N L K S 2 0 1 0 0 0 0 1 1 0 3 1 0 0 1 2 0 0 0 2 0 0 14 0 1404.8089 Q5T757;Q05519;Q5T760 Q5T757 138 151 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2;3 5.5707E-14 120.54 By MS/MS By MS/MS 2 2 91202000 39002000 52200000 1832 1464 1964 4235;4236;4237;4238 3596;3597;3598;3599 3598 1973 4 LNITKTTPK GLFKKAGKLNITKTTP NITKTTPKKDGSINTS K L N P K K 0 0 1 0 0 0 0 0 0 1 1 2 0 0 1 0 3 0 0 0 0 0 9 1 1014.6073 Q13621 Q13621 867 875 SLC12A1 Solute carrier family 12 member 1 yes yes 2 0.014606 70.412 By MS/MS 1 2303400 0 2303400 1833 1510 1965 4239 3600 3600 3742;3743 1 LNLGTDSDSSPQK TGDISVEKLNLGTDSD DSDSSPQKSSRDPPSS K L N Q K S 0 0 1 2 0 1 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 13 0 1360.647 K7EN76;Q16512 K7EN76 39 51 PKN1 Serine/threonine-protein kinase N1 yes no 2 2.1643E-06 107.93 By MS/MS By MS/MS 1 1 4545400 1940400 2605000 1834 1048 1966 4240;4241 3601;3602 3602 1381;1382;1383 2 LNLSVTSSAK QLSEELTKLNLSVTSS LSVTSSAKENCGDGPD K L N A K E 1 0 1 0 0 0 0 0 0 0 2 1 0 0 0 3 1 0 0 1 0 0 10 0 1018.5659 Q86VH2 Q86VH2 555 564 KIF27 Kinesin-like protein KIF27 yes yes 2 0.0046332 58.596 By MS/MS By matching 1 1 35391000 16046000 19345000 1835 1731 1967 4242;4243 3603 3603 240 2438;2439 1 LNNTVPSSFPSWYK KVLEFLAKLNNTVPSS SSFPSWYKDALKDVEE K L N Y K D 0 0 2 0 0 0 0 0 0 0 1 1 0 1 2 3 1 1 1 1 0 0 14 0 1638.8042 Q9UBF1 Q9UBF1 321 334 MAGEC2 Melanoma-associated antigen C2 yes yes 3 0.0076293 53.869 By MS/MS By matching 1 1 2224400 1151700 1072800 1836 2092 1968 4244;4245 3604 3604 314 2998 1 LNQPGTPTR GWLCKTLRLNQPGTPT NQPGTPTRTAV_____ R L N T R T 0 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 2 0 0 0 0 0 9 0 982.51959 M0R1B6;G5E9C7;P36507 M0R1B6 93 101 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 2 0.0074301 108.43 By MS/MS By matching 1 1 55040000 26922000 28118000 1837 809 1969 4246;4247 3605 3605 3502 1 LNQPGTPTRTAV GWLCKTLRLNQPGTPT GTPTRTAV________ R L N A V - 1 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 3 0 0 1 0 0 12 1 1253.6728 M0R1B6;G5E9C7;P36507 M0R1B6 93 104 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 2 0.012793 74.537 By matching By MS/MS 1 1 15932000 10404000 5527900 1838 809 1970 4248;4249 3606 3606 3502 1 LNQSSPDNVTDTK SILNSNIKLNQSSPDN PDNVTDTKGALSPITD K L N T K G 0 0 2 2 0 1 0 0 0 0 1 1 0 0 1 2 2 0 0 1 0 0 13 0 1417.6685 Q08AD1 Q08AD1 595 607 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 0.0032207 78.342 By MS/MS By MS/MS 1 1 3401700 1820800 1580900 1839 1472 1971 4250;4251 3607;3608 3608 1983;1984 0 LNSCETKSSTSSSQK FAERKLQRLNSCETKS SSTSSSQKTTPDASES R L N Q K T 0 0 1 0 1 1 1 0 0 0 1 2 0 0 0 6 2 0 0 0 0 0 15 1 1642.7468 Q5T5Y3 Q5T5Y3 825 839 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 2 0.016771 43.68 By MS/MS By matching 1 1 1394500 703710 690740 1840 1627 1972 4252;4253 3609 3609 220 2266;2267;2268;3795 1 LNSPLEK VDSGKTVKLNSPLEKI KLNSPLEKINSFSPQK K L N E K I 0 0 1 0 0 0 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 7 0 799.44397 Q9BX63;J3QSE8 Q9BX63 195 201 BRIP1 Fanconi anemia group J protein yes no 2 0.014201 88.177 By matching By MS/MS 1 1 1338000 525130 812860 1841 1971 1973 4254;4255 3610 3610 2798 1 LNSSENGEDRHK SSDKGRERLNSSENGE ENGEDRHKRKERKSSR R L N H K R 0 1 2 1 0 0 2 1 1 0 1 1 0 0 0 2 0 0 0 0 0 0 12 1 1384.6331 Q7L4I2;H0YGP9;E1B6W4 Q7L4I2 102 113 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 3 0.003149 68.751 By MS/MS By matching 1 1 2278000 1543700 734250 1842 1704 1974 4256;4257 3611 3611 2382 1 LNTSDFQK FGDLPRPRLNTSDFQK LNTSDFQKLKRKY___ R L N Q K L 0 0 1 1 0 1 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 8 0 951.46616 Q96B36 Q96B36 244 251 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.017295 99.343 By matching By MS/MS 1 1 37079000 19259000 17820000 1843 1875 1975 4258;4259 3612 3612 3879 1 LNTSDFQKLK FGDLPRPRLNTSDFQK TSDFQKLKRKY_____ R L N L K R 0 0 1 1 0 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 10 1 1192.6452 Q96B36 Q96B36 244 253 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.010364 95.094 By MS/MS By MS/MS 1 1 3792400 1874100 1918300 1844 1875 1976 4260;4261 3613;3614 3614 3879 2 LNTVASPK SKKIKLDRLNTVASPK LNTVASPKDCQELASI R L N P K D 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 8 0 828.47052 Q96T58 Q96T58 1057 1064 SPEN Msx2-interacting protein yes yes 2 0.0015078 87.149 By MS/MS 1 0 0 0 1845 1934 1977 4262 3615 3615 2741 1 LNVELSRYQTKFR GLKMTVHRLNVELSRY SRYQTKFRHLSKEEVT R L N F R H 0 2 1 0 0 1 1 0 0 0 2 1 0 1 0 1 1 0 1 1 0 0 13 2 1652.8998 A0A0C4DGP8;K7EJF0;Q96ST8 A0A0C4DGP8 325 337 CEP89 Centrosomal protein of 89 kDa yes no 3 0.017278 42.083 By MS/MS 1 0 0 0 1846 216 1978 4263 3616 3616 312;3292;4034 1 LNVLEKSSPGHR AISKLEARLNVLEKSS EKSSPGHRATAPQTQH R L N H R A 0 1 1 0 0 0 1 1 1 0 2 1 0 0 1 2 0 0 0 1 0 0 12 1 1335.7259 E9PL71;E9PQ49;E9PI39;E9PQZ1;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PK06;E9PPR1;E9PL12;E9PN91;E9PMW7;H0YCK7 E9PL71 88 99 EEF1D Elongation factor 1-delta yes no 2;3 1.7989E-15 138.55 By MS/MS By MS/MS 2 2 9451200 5194000 4257100 1847 112 1979 4264;4265;4266;4267 3617;3618;3619;3620 3619 146;147 4 LNYEHDNISLK VSRFFLYRLNYEHDNI EHDNISLKRVSKMPAF R L N L K R 0 0 2 1 0 0 1 0 1 1 2 1 0 0 0 1 0 0 1 0 0 0 11 0 1344.6674 H3BRM8;A0A0J9YWK2;A0A0J9YWM9;H3BSH7;Q969X6 H3BRM8 42 52 CIRH1A Cirhin yes no 3 0.019336 56.295 By MS/MS By matching 1 1 1205600 902860 302760 1848 253 1980 4268;4269 3621 3621 367 0 LPATAAEPEAAVISNGEH SPAKKVPRLPATAAEP AVISNGEH________ R L P E H - 5 0 1 0 0 0 3 1 1 1 1 0 0 0 2 1 1 0 0 1 0 0 18 0 1775.869 Q01581 Q01581 503 520 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 2 0.0087525 81.428 By MS/MS By MS/MS 1 2 3544100 1282200 2261900 1849 1451 1981 4270;4271;4272 3622;3623 3623 206 1933 2 LPDLSPVENK AGPIKAQKLPDLSPVE DLSPVENKEHKPGPIG K L P N K E 0 0 1 1 0 0 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1110.5921 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2103 2112 PRRC2C Protein PRRC2C yes no 2 0.01905 57.802 By matching By MS/MS 1 1 7863200 3796900 4066300 1850 570 1982 4273;4274 3624 3624 757 1 LPDSDDDEDEETAIQR QVTLQDYRLPDSDDDE DEETAIQRVLQQLTEE R L P Q R V 1 1 0 5 0 1 3 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 16 0 1846.7705 H3BRM1;H3BRF9;Q96K21 H3BRM1 259 274 ZFYVE19 Abscission/NoCut checkpoint regulator yes no 2 0.011474 53.491 By MS/MS By matching 1 1 10088000 4685700 5402200 1851 925 1983 4275;4276 3625 3625 1235 1 LPGLVFLYMEK IDQRVLEKLPGLVFLY LVFLYMEKNQLEEVPS K L P E K N 0 0 0 0 0 0 1 1 0 0 3 1 1 1 1 0 0 0 1 1 0 0 11 0 1308.7152 P51888 P51888 149 159 PRELP Prolargin yes yes 2 9.8755E-07 128.86 By MS/MS By MS/MS 2 2 27924000 15888000 12036000 1852 1398 1984;1985 4277;4278;4279;4280 3626;3627;3628 3627 186 3 LPGSGAVQAASPER APGARLLRLPGSGAVQ VQAASPERAGWTEALR R L P E R A 3 1 0 0 0 1 1 2 0 0 1 0 0 0 2 2 0 0 0 1 0 0 14 0 1338.6892 Q86U90 Q86U90 50 63 YRDC YrdC domain-containing protein, mitochondrial yes yes 2 0.00027547 92.952 By MS/MS By MS/MS 1 1 4301900 2136500 2165400 1853 1724 1986 4281;4282 3629;3630 3629 2431 2 LPIFSRLSISDD PSLDPGRRLPIFSRLS SRLSISDD________ R L P D D - 0 1 0 2 0 0 0 0 0 2 2 0 0 1 1 3 0 0 0 0 0 0 12 1 1361.7191 P47974;Q07352 P47974 483 494 ZFP36L2;ZFP36L1 Zinc finger protein 36, C3H1 type-like 2;Zinc finger protein 36, C3H1 type-like 1 yes no 2 4.1454E-09 125.84 By MS/MS By MS/MS 1 1 4610800 2272600 2338300 1854 1372 1987 4283;4284 3631;3632 3631 1819;1820 2 LPLLPPESPGPLR ERRGGGLRLPLLPPES PESPGPLRQRHVACLA R L P L R Q 0 1 0 0 0 0 1 1 0 0 4 0 0 0 5 1 0 0 0 0 0 0 13 0 1384.8078 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 765 777 SCRIB Protein scribble homolog yes no 2 3.4115E-10 125.03 By MS/MS By MS/MS 1 1 5505900 2421700 3084300 1855 245 1988 4285;4286 3633;3634;3635;3636;3637;3638;3639;3640 3638 350 8 LPLVPESPR GLEGRPERLPLVPESP PLVPESPRRMMTRSQD R L P P R R 0 1 0 0 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 9 0 1006.5811 C9J0I9;Q86WB0 C9J0I9 272 280 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.0020877 91.937 By MS/MS By MS/MS 1 1 3509200 1439900 2069200 1856 432 1989 4287;4288 3641;3642 3642 615 2 LPLVPESPRR GLEGRPERLPLVPESP LVPESPRRMMTRSQDA R L P R R M 0 2 0 0 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 10 1 1162.6822 C9J0I9;Q86WB0 C9J0I9 272 281 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.00011436 121.68 By MS/MS By MS/MS 1 1 8732700 3818100 4914600 1857 432 1990 4289;4290 3643;3644;3645 3643 615 3 LPSAQTPNGTDYVASGK KQPPPSIRLPSAQTPN TDYVASGKSIQTPQSH R L P G K S 2 0 1 1 0 1 0 2 0 0 1 1 0 0 2 2 2 0 1 1 0 0 17 0 1704.8319 E7EPN9;Q9Y520;H7C5N8 E7EPN9 1962 1978 PRRC2C Protein PRRC2C yes no 2 0.0065477 54.953 By matching By MS/MS 1 1 2893400 1368300 1525100 1858 570 1991 4291;4292 3646 3646 89 3407 1 LPSGLPVSLLTLYLDNNK LSFNQIARLPSGLPVS TLYLDNNKISNIPDEY R L P N K I 0 0 2 1 0 0 0 1 0 0 6 1 0 0 2 2 1 0 1 1 0 0 18 0 1956.0932 P51884;CON__Q05443 P51884 199 216 LUM Lumican yes no 2 0.00084535 91.62 By MS/MS By MS/MS 1 1 10693000 6354100 4339200 1859 1397 1992 4293;4294 3647;3648;3649 3647 3 LPSPEPSMSPK SLTGSYAKLPSPEPSM PEPSMSPKMHRRRSRT K L P P K M 0 0 0 0 0 0 1 0 0 0 1 1 1 0 4 3 0 0 0 0 0 0 11 0 1168.5798 O43303 O43303 364 374 CCP110 Centriolar coiled-coil protein of 110 kDa yes yes 2 0.0032621 80.688 By MS/MS By MS/MS 1 1 1831600 704660 1127000 1860 1119 1993 4295;4296 3650;3651 3650 1490 2 LPSSPVYEDAASFK APQPTEERLPSSPVYE YEDAASFKAELSYRGP R L P F K A 2 0 0 1 0 0 1 0 0 0 1 1 0 1 2 3 0 0 1 1 0 0 14 0 1509.7351 Q14247;H0YEV2;H0YCD9 Q14247 415 428 CTTN Src substrate cortactin yes no 2 2.329E-06 101.62 By MS/MS By MS/MS 2 2 28667000 12822000 15845000 1861 1519 1994;1995 4297;4298;4299;4300 3652;3653;3654 3654 2083;2084;4352 3 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR LKAELMERLQAALDDE LGGDSAGRSGAGLEQE R L Q G R S 5 2 1 4 0 1 3 7 0 0 4 0 1 0 2 2 0 0 0 0 0 0 32 1 3125.432 Q00839 Q00839 38 69 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3 0.0013186 46.252 By MS/MS By MS/MS 3 3 50971000 26238000 24734000 1862 1448 1996;1997;1998 4301;4302;4303;4304;4305;4306 3655;3656;3657;3658;3659 3657 205 196 1930 5 LQAKESPQRK CLAWAPARLQAKESPQ AKESPQRKKRKSEAVG R L Q R K K 1 1 0 0 0 2 1 0 0 0 1 2 0 0 1 1 0 0 0 0 0 0 10 2 1183.6673 Q15061 Q15061 72 81 WDR43 WD repeat-containing protein 43 yes yes 2 0.011485 60.691 By MS/MS 1 0 0 0 1863 1543 1999 4307 3660 3660 2129 1 LQDEANYHLYGSR NEPSLQSKLQDEANYH NYHLYGSRMDRQTKQQ K L Q S R M 1 1 1 1 0 1 1 1 1 0 2 0 0 0 0 1 0 0 2 0 0 0 13 0 1564.727 Q13546 Q13546 378 390 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 3 0.0089556 54.343 By matching By MS/MS 1 1 3154100 1540700 1613400 1864 1507 2000 4308;4309 3661 3661 2066 1 LQEEGGGSDEEETGSPSEDGMQSAR LIAEAKEKLQEEGGGS EDGMQSARTQARPREP K L Q A R T 1 1 0 2 0 2 6 5 0 0 1 0 1 0 1 4 1 0 0 0 0 0 25 0 2581.0358 Q13610 Q13610 43 67 PWP1 Periodic tryptophan protein 1 homolog yes yes 3 0.018079 40.237 By matching By MS/MS 1 1 10613000 5288000 5325500 1865 1509 2001 4310;4311 3662 3662 2069 1 LQEEQDGGSSDEDRAGPAPPGASDGVDIQDVK GRRRKVLRLQEEQDGG GVDIQDVKFKLRHDLA R L Q V K F 3 1 0 6 0 3 3 5 0 1 1 1 0 0 3 3 0 0 0 2 0 0 32 1 3238.4498 H7C504;Q14147 H7C504 130 161 DHX34 Probable ATP-dependent RNA helicase DHX34 yes no 3 0.0045928 42.536 By MS/MS By matching 1 1 5870900 2585900 3285000 1866 971 2002 4312;4313 3663 3663 1302;1303 1 LQELESCSGLGSTSDDTDVR PDLKQEERLQELESCS TSDDTDVREVSSRPST R L Q V R E 0 1 0 3 1 1 2 2 0 0 3 0 0 0 0 4 2 0 0 1 0 0 20 0 2167.9539 H0Y7I9;C9IZ08;Q14C86;B4DGD8;H0Y4E7;F8W9S7 H0Y7I9 598 617 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2 2.0378E-06 97.32 By matching By MS/MS 1 1 12471000 5066300 7404600 1867 428 2003 4314;4315 3664;3665 3664 607;3360 2 LQGKESHLDTLSR FKPLFLQRLQGKESHL SHLDTLSRAQLTQLFL R L Q S R A 0 1 0 1 0 1 1 1 1 0 3 1 0 0 0 2 1 0 0 0 0 0 13 1 1482.7791 D6RAR6;Q14CZ7 D6RAR6 478 490 FASTKD3 FAST kinase domain-containing protein 3 yes no 2 0.017206 45.115 By MS/MS 1 116920 116920 0 1868 526 2004 4316 3666 3666 712;3392 1 LQGSQDNIGK GKPTLQLKLQGSQDNI GSQDNIGKDTCWKLVG K L Q G K D 0 0 1 1 0 2 0 2 0 1 1 1 0 0 0 1 0 0 0 0 0 0 10 0 1058.5356 Q9NZH7 Q9NZH7 88 97 IL36B Interleukin-36 beta yes yes 2 0.019324 43.769 By MS/MS 1 0 0 0 1869 2076 2005 4317 3667 3667 307 2984 1 LQHLENELTHDIITK FFLPDEGKLQHLENEL LTHDIITKFLENEDRR K L Q T K F 0 0 1 1 0 1 2 0 2 2 3 1 0 0 0 0 2 0 0 0 0 0 15 0 1802.9527 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 284 298 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 3 0.021483 47.545 By MS/MS By matching 1 1 3132700 1626000 1506700 1870 1 2006 4318;4319 3668 3668 1 LQHQQLYYSQDDSNRK PAREQNRRLQHQQLYY SQDDSNRKNFDAYRLY R L Q R K N 0 1 1 2 0 4 0 0 1 0 2 1 0 0 0 2 0 0 2 0 0 0 16 1 2021.9555 A0A0D9SF60;Q99569 Q99569 1107 1122 PKP4 Plakophilin-4 no no 3 0.0038144 51.591 By MS/MS By matching 1 1 2618800 1198100 1420700 1871 232;1939 2007 4320;4321 3669;3670 3670 4038 2 LQLDNQYAVLENQK VSKNQALKLQLDNQYA YAVLENQKSSHSQYN_ K L Q Q K S 1 0 2 1 0 3 1 0 0 0 3 1 0 0 0 0 0 0 1 1 0 0 14 0 1674.8577 Q9UKY7;D6R9V8 Q9UKY7 238 251 CDV3 Protein CDV3 homolog yes no 3 5.4885E-05 95.264 By MS/MS By matching 1 1 2682600 1111700 1570900 1872 2116 2008 4322;4323 3671 3671 4460 1 LQLGTPPPLLAAR HGAAASERLQLGTPPP PPPLLAARLVPPRNLM R L Q A R L 2 1 0 0 0 1 0 1 0 0 4 0 0 0 3 0 1 0 0 0 0 0 13 0 1345.8082 Q9P2N5 Q9P2N5 443 455 RBM27 RNA-binding protein 27 yes yes 2 8.7402E-09 115.06 By matching By MS/MS 1 1 2838200 1446200 1392000 1873 2091 2009 4324;4325 3672 3672 3952 1 LQLLEDDKENR KGTNSYYKLQLLEDDK LEDDKENRYWIFRSWG K L Q N R Y 0 1 1 2 0 1 2 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 11 1 1371.6994 P09874 P09874 572 582 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.00075398 89.561 By matching By MS/MS 1 1 1721900 633230 1088600 1874 1244 2010 4326;4327 3673 3673 1 LQLQEQLQAETELCAEAEELR QSQLMAEKLQLQEQLQ CAEAEELRARLTAKKQ K L Q L R A 3 1 0 0 1 4 6 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 21 0 2500.2115 P35579 P35579 883 903 MYH9 Myosin-9 yes yes 2;3 2.1607E-17 122.19 By MS/MS By MS/MS 2 2 36839000 17851000 18988000 1875 1340 2011 4328;4329;4330;4331 3674;3675;3676;3677 3676 4 LQLQGLDLSSR SLELEVARLQLQGLDL QGLDLSSRSLLGIDTE R L Q S R S 0 1 0 1 0 2 0 1 0 0 4 0 0 0 0 2 0 0 0 0 0 0 11 0 1228.6776 P49454 P49454 1739 1749 CENPF Centromere protein F yes yes 2 0.017787 57.164 By matching By MS/MS 1 1 584110 274350 309760 1876 1379 2012 4332;4333 3678 3678 1840 1 LQPERGSPK AEKHVTQRLQPERGSP QPERGSPKKCEAEEAE R L Q P K K 0 1 0 0 0 1 1 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1010.5509 S4R3H4;E7EQT4;Q9UKV3;A0A087WYN3 S4R3H4 665 673 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0050255 92.112 By MS/MS By matching 1 1 32794000 14484000 18310000 1877 576 2013 4334;4335 3679 3679 767 1 LQPSSSPENSLDPFPPR RKFGAQFKLQPSSSPE SLDPFPPRILKEEPKG K L Q P R I 0 1 1 1 0 1 1 0 0 0 2 0 0 1 5 4 0 0 0 0 0 0 17 0 1866.9112 H3BUF6;Q8WWM7 H3BUF6 560 576 ATXN2L Ataxin-2-like protein yes no 2 0.016168 49.627 By MS/MS By matching 1 1 10503000 6146700 4356100 1878 935 2014 4336;4337 3680 3680 1254 1 LQQGAGLESPQGQPEPGAASPQR KTSPGSPRLQQGAGLE PGAASPQRQQDLHLES R L Q Q R Q 3 1 0 0 0 5 2 4 0 0 2 0 0 0 4 2 0 0 0 0 0 0 23 0 2302.1302 Q9H6F5 Q9H6F5 72 94 CCDC86 Coiled-coil domain-containing protein 86 yes yes 3 0.01217 44.164 By MS/MS By matching 1 1 32362000 14385000 17977000 1879 2009 2015 4338;4339 3681 3681 2876 1 LQQQHSEQPPLQPSPVMTR MKTRRTTRLQQQHSEQ QPSPVMTRRGLRDSHS R L Q T R R 0 1 0 0 0 5 1 0 1 0 2 0 1 0 4 2 1 0 0 1 0 0 19 0 2200.1059 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 9 27 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.0020971 56.424 By MS/MS By MS/MS 2 2 78022000 43707000 34315000 1880 164 2016;2017 4340;4341;4342;4343 3682;3683;3684;3685 3683 23 225;3268 4 LQRLPSSSSEMGSQDGSPLR DSFLKSARLQRLPSSS SQDGSPLRETRKDPFS R L Q L R E 0 2 0 1 0 2 1 2 0 0 3 0 1 0 2 6 0 0 0 0 0 0 20 1 2131.0328 A2A2G5;Q9UJ14 A2A2G5 84 103 GGT7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain yes no 3 0.0018759 68.192 By matching By MS/MS 1 1 4652600 2526200 2126400 1881 313 2018 4344;4345 3686 3686 46 449 1 LQSAGSAMPTSSSFK SPALKTTRLQSAGSAM MPTSSSFKHRIKEQED R L Q F K H 2 0 0 0 0 1 0 1 0 0 1 1 1 1 1 5 1 0 0 0 0 0 15 0 1497.7133 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1232 1246 CEP170 Centrosomal protein of 170 kDa yes no 2 0.00011674 81.428 By MS/MS By MS/MS 1 1 4217700 2084700 2133000 1882 815 2019 4346;4347 3687;3688 3688 1090 2 LQSEPQVLLIRAQTLYKK ________________ RAQTLYKKFVKSTGFL K L Q K K F 1 1 0 0 0 3 1 0 0 1 4 2 0 0 1 1 1 0 1 1 0 0 18 2 2127.2416 G3V1Z3 G3V1Z3 5 22 TMEM116 yes yes 3 0.0066622 48.288 By MS/MS 1 679640000 0 679640000 1883 786 2020 4348 3689 3689 387;388 1045;3493 1 LQSFDSPER RGNDRREKLQSFDSPE QSFDSPERKRIKYSRE K L Q E R K 0 1 0 1 0 1 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 9 0 1077.5091 E9PGM9;P78332 E9PGM9 888 896 RBM6 RNA-binding protein 6 yes no 2 0.010024 78.903 By MS/MS By MS/MS 1 1 5302100 2413400 2888700 1884 634 2021 4349;4350 3690;3691 3691 858 2 LQSIGTENTEENR STGSIAKRLQSIGTEN TENTEENRRFYRQLLL R L Q N R R 0 1 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 13 0 1489.7009 H3BQN4;J3KPS3;P04075;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 44 56 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.00070245 94.692 By matching By MS/MS 1 1 3914200 1905500 2008700 1885 921 2022 4351;4352 3692 3692 1 LQSIGTENTEENRR STGSIAKRLQSIGTEN ENTEENRRFYRQLLLT R L Q R R F 0 2 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 14 1 1645.802 H3BQN4;J3KPS3;P04075;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 44 57 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 3 0.0080129 49.223 By matching By MS/MS 1 1 3048100 1395400 1652700 1886 921 2023 4353;4354 3693 3693 1233 1 LQSPLPGESAAK QKKQQEQKLQSPLPGE LPGESAAKKSESATSN K L Q A K K 2 0 0 0 0 1 1 1 0 0 2 1 0 0 2 2 0 0 0 0 0 0 12 0 1196.6401 H0YLX2;Q2KHR2 H0YLX2 223 234 RFX7 DNA-binding protein RFX7 yes no 2 0.0013505 89.189 By matching By MS/MS 1 1 2148000 1109700 1038300 1887 896 2024 4355;4356 3694 3694 1202 1 LQTPNTFPK TPQAKKIKLQTPNTFP QTPNTFPKRKKGEKRA K L Q P K R 0 0 1 0 0 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 0 0 9 0 1044.5604 A0A0A0MRM9;Q14978 A0A0A0MRM9 614 622 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0048724 89.561 By MS/MS By MS/MS 1 1 6720000 3111800 3608200 1888 146 2025 4357;4358 3695;3696 3696 3258;3259 2 LQVYEGGGQPPPQDLPGSPK EVAALRKKLQVYEGGG QDLPGSPKSGPPPEHL K L Q P K S 0 0 0 1 0 3 1 4 0 0 2 1 0 0 5 1 0 0 1 1 0 0 20 0 2063.0324 A0A0C4DGP2;A0A0C4DGP5;Q86Y91 A0A0C4DGP2 387 406 KIF18B Kinesin-like protein;Kinesin-like protein KIF18B yes no 2 0.0043092 65.47 By matching By MS/MS 1 1 2227100 777850 1449300 1889 215 2026 4359;4360 3697 3697 311 1 LRDAPKSQR NAQELFLRLRDAPKSQ RDAPKSQRKNLLYATW R L R Q R K 1 2 0 1 0 1 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 9 2 1069.5992 F5GYN7;Q5FWF4 F5GYN7 525 533 ZRANB3 DNA annealing helicase and endonuclease ZRANB3;DNA annealing helicase ZRANB3;Endonuclease ZRANB3 yes no 3 0.022108 57.59 By matching By MS/MS 1 1 1831900 756090 1075900 1890 703 2027 4361;4362 3698 3698 939 0 LRLSPSPTSQR LLEGEEERLRLSPSPT SPSPTSQRSRGRASSH R L R Q R S 0 2 0 0 0 1 0 0 0 0 2 0 0 0 2 3 1 0 0 0 0 0 11 1 1240.6888 Q3BDU5;P02545;A0A0C4DGC5;Q5TCI8 Q3BDU5 387 397 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.018362 66.708 By MS/MS By matching 1 1 6950300 3674000 3276300 1891 1211 2028 4363;4364 3699 3699 1610 1 LRPKSPPPK GCTEEIERLRPKSPPP RPKSPPPKSKSDRGGG R L R P K S 0 1 0 0 0 0 0 0 0 0 1 2 0 0 4 1 0 0 0 0 0 0 9 2 1018.6287 Q9HCE5 Q9HCE5 395 403 METTL14 N6-adenosine-methyltransferase subunit METTL14 yes yes 3 0.013904 74.173 By MS/MS By matching 1 1 8315300 4516100 3799200 1892 2029 2029 4365;4366 3700 3700 2899 1 LRSAPAYKMQFK SWYKEHTKLRSAPAYK PAYKMQFKNNVASLVI K L R F K N 2 1 0 0 0 1 0 0 0 0 1 2 1 1 1 1 0 0 1 0 0 0 12 2 1438.7755 A0A0A0MTS7;Q8WZ42 A0A0A0MTS7 8304 8315 TTN Titin yes no 3 0.017455 43.628 By MS/MS 1 0 0 0 1893 186 2030 4367 3701 3701 266 1 LRSPSNDSAHR NRSHTSGRLRSPSNDS PSNDSAHRSGDDQSGR R L R H R S 1 2 1 1 0 0 0 0 1 0 1 0 0 0 1 3 0 0 0 0 0 0 11 1 1238.6116 Q5T200 Q5T200 1206 1216 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 5.4665E-06 123.68 By MS/MS By MS/MS 1 1 10646000 5133600 5512200 1894 1624 2031 4368;4369 3702;3703 3703 2257 2 LSANQQNILK LLRSVLDKLSANQQNI ANQQNILKFIACNEIF K L S L K F 1 0 2 0 0 2 0 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1127.6299 H0Y8N0;D6RAA6;P57088 H0Y8N0 83 92 TMEM33 Transmembrane protein 33 yes no 2 0.02214 53.166 By matching By MS/MS 1 1 648060 286500 361560 1895 523 2032 4370;4371 3704 3704 76;77 1 LSASSEDISER GKGLCATKLSASSEDI SSEDISERLASISVGP K L S E R L 1 1 0 1 0 0 2 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0 11 0 1192.5572 Q13233 Q13233 920 930 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 yes yes 2 0.0028161 82.85 By MS/MS By MS/MS 1 1 2210000 1229600 980410 1896 1495 2033 4372;4373 3705;3706 3706 2044;2045 2 LSASTASELSPK LPASPRARLSASTASE TASELSPKSKARPSSP R L S P K S 2 0 0 0 0 0 1 0 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1189.619 Q3KQU3;H0YF21 Q3KQU3 451 462 MAP7D1 MAP7 domain-containing protein 1 yes no 2 8.9506E-11 128.95 By MS/MS By matching 1 1 11512000 5640000 5871800 1897 1583 2034 4374;4375 3707 3707 2190 1 LSCIGSPIVSPR DCIKDYERLSCIGSPI GSPIVSPRIVQLETES R L S P R I 0 1 0 0 1 0 0 1 0 2 1 0 0 0 2 3 0 0 0 1 0 0 12 0 1284.686 Q9UKT4 Q9UKT4 93 104 FBXO5 F-box only protein 5 yes yes 2 0.0018975 79.089 By matching By MS/MS 1 1 3155800 1609600 1546200 1898 2112 2035 4376;4377 3708 3708 3024 1 LSDDFDSPVKGPLCK PLKKREIKLSDDFDSP PVKGPLCKSVTPTKEF K L S C K S 0 0 0 3 1 0 0 1 0 0 2 2 0 1 2 2 0 0 0 1 0 0 15 1 1676.808 Q96T23;H0YER1;H0YCN2 Q96T23 391 405 RSF1 Remodeling and spacing factor 1 yes no 3 0.0013542 68.277 By MS/MS By matching 1 1 2940600 1371200 1569400 1899 1933 2036 4378;4379 3709 3709 2736 1 LSDGVFKPDTFHGLK LLDLQHNRLSDGVFKP PDTFHGLKNLMQLNLA R L S L K N 0 0 0 2 0 0 0 2 1 0 2 2 0 2 1 1 1 0 0 1 0 0 15 1 1659.8621 P51888 P51888 207 221 PRELP Prolargin yes yes 3 0.0022134 60.401 By MS/MS 1 462700 0 462700 1900 1398 2037 4380 3710 3710 1 LSDSYSNTLPVR SPPQSQSKLSDSYSNT YSNTLPVRKSVTPKNS K L S V R K 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 3 1 0 1 1 0 0 12 0 1350.6779 I3L0Y9;I3L3C6;B4DWA1;I3L4C2;Q9UQB8 I3L0Y9 90 101 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 2 0.00064063 90.05 By MS/MS By matching 1 1 995970 352570 643410 1901 383 2038 4381;4382 3711 3711 4093 1 LSELEAALQR AIKDANAKLSELEAAL ELEAALQRAKQDMARQ K L S Q R A 2 1 0 0 0 1 2 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1128.6139 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__REFSEQ:XP_092267;CON__Q9H552 CON__H-INV:HIT000292931 313 322 KRT8 Keratin, type II cytoskeletal 8 yes no 2 0.0028591 97.635 By MS/MS 1 365610 365610 0 + 1902 498 2039 4383 3712 3712 1 LSGFSFKK FSFKKSFKLSGFSFKK LSGFSFKKNKKEAGEG K L S K K N 0 0 0 0 0 0 0 1 0 0 1 2 0 2 0 2 0 0 0 0 0 0 8 1 912.5069 P29966 P29966 166 173 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.011559 99.788 By MS/MS By MS/MS 1 1 470690000 212660000 258030000 1903 1325 2040 4384;4385 3713;3714 3714 1749 2 LSGLSFKR FSFKKPFKLSGLSFKR LSGLSFKRNRKEGGGD K L S K R N 0 1 0 0 0 0 0 1 0 0 2 1 0 1 0 2 0 0 0 0 0 0 8 1 906.5287 P49006 P49006 100 107 MARCKSL1 MARCKS-related protein yes yes 2 0.015298 96.143 By MS/MS By matching 1 1 271430000 131280000 140150000 1904 1377 2041 4386;4387 3715 3715 1838 1 LSITGTYDLK SASLHLPKLSITGTYD ITGTYDLKSVLGQLGI K L S L K S 0 0 0 1 0 0 0 1 0 1 2 1 0 0 0 1 2 0 1 0 0 0 10 0 1109.5968 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 315 324 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.018635 60.828 By MS/MS By matching 1 1 2612600 1505500 1107100 1905 1 2042 4388;4389 3716 3716 1 LSKYLQGVVFRCDK PIEVCRSKLSKYLQGV GVVFRCDKCTFTCSSD K L S D K C 0 1 0 1 1 1 0 1 0 0 2 2 0 1 0 1 0 0 1 2 0 0 14 2 1711.908 H3BLX4;Q96JM2 H3BLX4 1234 1247 ZNF462 Zinc finger protein 462 yes no 3 0.017064 56.139 By MS/MS 1 7516200 0 7516200 1906 902 2043 4390 3717 3717 1210 0 LSLEGDHSTPPSAYGSVK TVHEILCKLSLEGDHS PSAYGSVKAYTNFDAE K L S V K A 1 0 0 1 0 0 1 2 1 0 2 1 0 0 2 4 1 0 1 1 0 0 18 0 1843.8952 H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;H0YMD9;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;A6NMY6;H0YNB8;H0YKN4 H0YMM1 11 28 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 3 0.0018537 64.507 By MS/MS By MS/MS 1 2 4641400 1972400 2669000 1907 893 2044 4391;4392;4393 3718;3719;3720 3720 1199 3 LSLLSSTSK VFCSVPGRLSLLSSTS SLLSSTSKYKVTVAEV R L S S K Y 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 4 1 0 0 0 0 0 9 0 934.53351 C9JXZ2;H7C5E5;C1K3N0;Q96SH1;P05549;Q6VUC0;Q92754;Q7Z6R9;Q92481 C9JXZ2 75 83 TFAP2A;TFAP2E;TFAP2C;TFAP2D;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2 gamma;Transcription factor AP-2-delta;Transcription factor AP-2-beta yes no 2 0.010729 72.434 By matching By MS/MS 1 1 659230 306950 352280 1908 424 2045 4394;4395 3721 3721 600;601;3358 1 LSMDGSPTR EKCKCFLRLSMDGSPT SMDGSPTRIAYGTQGS R L S T R I 0 1 0 1 0 0 0 1 0 0 1 0 1 0 1 2 1 0 0 0 0 0 9 0 962.44913 E9PBC5;H0YAC1;P03952 E9PBC5 313 321 KLKB1 Plasma kallikrein;Plasma kallikrein heavy chain;Plasma kallikrein light chain yes no 1 0.021721 43.246 By matching By MS/MS 1 1 3699800 2365500 1334200 1909 608 2046 4396;4397 3722 3722 837;3430 1 LSMEDSKSPPPK GEFIQQLKLSMEDSKS DSKSPPPKATEEKKSL K L S P K A 0 0 0 1 0 0 1 0 0 0 1 2 1 0 3 3 0 0 0 0 0 0 12 1 1314.649 Q9NQG5 Q9NQG5 127 138 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 2 0.0035043 71.976 By MS/MS By matching 1 1 2051400 1089300 962150 1910 2039 2047 4398;4399 3723 3723 295 2914 1 LSNVSLTGVSTIR CSGVRRRRLSNVSLTG LTGVSTIRTSSAELST R L S I R T 0 1 1 0 0 0 0 1 0 1 2 0 0 0 0 3 2 0 0 2 0 0 13 0 1345.7565 Q15139;F8WBA3 Q15139 204 216 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 2 0.00042169 80.632 By MS/MS By MS/MS 1 1 3058800 1456800 1602000 1911 1545 2048 4400;4401 3724;3725 3724 2131;2132 2 LSPATPTSEGPK LAEASLLKLSPATPTS TPTSEGPKVVSVQLGD K L S P K V 1 0 0 0 0 0 1 1 0 0 1 1 0 0 3 2 2 0 0 0 0 0 12 0 1183.6085 Q8N1G0;F8WCX2 Q8N1G0 373 384 ZNF687 Zinc finger protein 687 yes no 2 0.019866 59.225 By MS/MS 1 0 0 0 1912 1771 2049 4402 3726 3726 3854 1 LSPKQSATMPK PEAEVPGKLSPKQSAT KQSATMPKKGILKKTQ K L S P K K 1 0 0 0 0 1 0 0 0 0 1 2 1 0 2 2 1 0 0 0 0 0 11 1 1186.638 O60285 O60285 454 464 NUAK1 NUAK family SNF1-like kinase 1 yes yes 2 0.0018599 96.015 By MS/MS By matching 1 1 1469000 807880 661120 1913 1134 2050 4403;4404 3727 3727 398 136 3611 1 LSPPQYSHQVQVK NGSSSPPRLSPPQYSH YSHQVQVKEEPAEAEE R L S V K E 0 0 0 0 0 3 0 0 1 0 1 1 0 0 2 2 0 0 1 2 0 0 13 0 1509.794 B7ZBM3;Q8IVH2 B7ZBM3 614 626 FOXP4 Forkhead box protein P4 yes no 3 0.017437 43.544 By MS/MS 1 547160 0 547160 1914 413 2051 4405 3728 3728 578 0 LSQLSVTDVTTSSLR TSEESRPRLSQLSVTD DVTTSSLRLNWEAPPG R L S L R L 0 1 0 1 0 1 0 0 0 0 3 0 0 0 0 4 3 0 0 2 0 0 15 0 1605.8574 A0A087X0I0;A0A140T9L7;A0A140T8Z8;A0A140T9C0;A0A140T902;A0A140T8Y3;A0A140TA52;A0A140TA41;A0A140TA33;Q16473;P22105 A0A087X0I0 1376 1390 TNXB;TNXA Putative tenascin-XA;Tenascin-X yes no 3 0.021541 41.227 By MS/MS 1 371470 0 371470 1915 99 2052 4406 3729 3729 128;129 1 LSQMQSPIPLTETR FGAQTSSRLSQMQSPI PIPLTETRTPPGPCCS R L S T R T 0 1 0 0 0 2 1 0 0 1 2 0 1 0 2 2 2 0 0 0 0 0 14 0 1599.829 H3BSW6;Q2VPK5 H3BSW6 485 498 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 yes no 2 0.0012129 74.816 By MS/MS By MS/MS 2 2 6728800 3167800 3561000 1916 931 2053;2054 4407;4408;4409;4410 3730;3731;3732 3731 110 1249 3 LSQSDEDVIR SSLKKKKRLSQSDEDV QSDEDVIRLIGQHLNG R L S I R L 0 1 0 2 0 1 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 10 0 1160.5673 H0Y917;Q9H7D7 H0Y917 112 121 WDR26 WD repeat-containing protein 26 yes no 2 0.0021507 93.345 By matching By MS/MS 1 1 871980 440130 431850 1917 856 2055 4411;4412 3733 3733 1151;1152 1 LSRGDSLKEPTSIAESSR MPHSSSAKLSRGDSLK TSIAESSRHPSYRSEP K L S S R H 1 2 0 1 0 0 2 1 0 1 2 1 0 0 1 5 1 0 0 0 0 0 18 2 1931.9912 H0YEF4;Q9C0B5 H0YEF4 209 226 ZDHHC5 Palmitoyltransferase;Palmitoyltransferase ZDHHC5 yes no 3 0.018656 50.873 By MS/MS By matching 1 1 4611400 2193000 2418400 1918 879 2056 4413;4414 3734 3734 1185 1 LSSEDEEEDEAEDDQSEASGKK HPSNMMSKLSSEDEEE QSEASGKKSVKG____ K L S K K S 2 0 0 4 0 1 7 1 0 0 1 2 0 0 0 4 0 0 0 0 0 0 22 1 2425.9729 G3V4G1;Q8NEJ9 G3V4G1 116 137 NGDN Neuroguidin yes no 3 0.00045531 79.565 By MS/MS By matching 1 1 11342000 6923700 4418200 1919 797 2057 4415;4416 3735 3735 1057 1 LSSPVLHR RLSNGLARLSSPVLHR LSSPVLHRLRLREDEN R L S H R L 0 1 0 0 0 0 0 0 1 0 2 0 0 0 1 2 0 0 0 1 0 0 8 0 907.52395 Q16643;D6R9W4;D6RCR4 Q16643 140 147 DBN1 Drebrin yes no 2 0.0080589 90.906 By MS/MS By MS/MS 1 1 195960000 89260000 106700000 1920 1574 2058 4417;4418 3736;3737 3736 2173 2 LSSQISAGEEK GWNEKSVKLSSQISAG QISAGEEKWNSVSPAS K L S E K W 1 0 0 0 0 1 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 11 0 1147.5721 E5RJU9;Q86UE4;H0YB56 E5RJU9 270 280 MTDH Protein LYRIC yes no 2 1.5548E-07 132.59 By MS/MS By MS/MS 1 1 47428000 24459000 22969000 1921 555 2059 4419;4420 3738;3739;3740 3738 735 3 LSSQISAGEEKWNSVSPASAGKR GWNEKSVKLSSQISAG SPASAGKRKTEPSAWS K L S K R K 3 1 1 0 0 1 2 2 0 1 1 2 0 0 1 6 0 1 0 1 0 0 23 2 2388.2034 E5RJU9;Q86UE4;H0YB56 E5RJU9 270 292 MTDH Protein LYRIC yes no 3 0.021608 47.603 By MS/MS By matching 1 1 4352300 2121200 2231100 1922 555 2060 4421;4422 3741 3741 735 1 LSSRHTMAR GKPVVPTRLSSRHTMA SSRHTMARLSRSSEPS R L S A R L 1 2 0 0 0 0 0 0 1 0 1 0 1 0 0 2 1 0 0 0 0 0 9 1 1057.5451 Q5T925 Q5T925 82 90 SORBS1 yes yes 2 0.0077084 72.243 By MS/MS By MS/MS 1 1 2509300 1474300 1035000 1923 1634 2061 4423;4424 3742;3743 3743 237 3802 2 LSSSMYSSQGSSGSSQSK SEGSSSSKLSSSMYSS SSGSSQSKNSSQSGGK K L S S K N 0 0 0 0 0 2 0 2 0 0 1 1 1 0 0 10 0 0 1 0 0 0 18 0 1793.7738 Q15648 Q15648 1127 1144 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 3 0.0087296 48.623 By MS/MS By MS/MS 1 1 16012000 4128900 11883000 1924 1562 2062 4425;4426 3744;3745 3744 2154 2 LSSTDDGYIDLQFK SSKVKYSRLSSTDDGY GYIDLQFKKTPPKIPY R L S F K K 0 0 0 3 0 1 0 1 0 1 2 1 0 1 0 2 1 0 1 0 0 0 14 0 1600.7621 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 22 35 TMEM230 Transmembrane protein 230 yes no 2 2.0084E-21 134.75 By MS/MS By MS/MS 1 1 11811000 4915300 6896100 1925 31 2063 4427;4428 3746;3747 3746 33 2 LSSWDQAETPGHTPSLR TPGATPKKLSSWDQAE PGHTPSLRWDETPGRA K L S L R W 1 1 0 1 0 1 1 1 1 0 2 0 0 0 2 3 2 1 0 0 0 0 17 0 1880.9017 O75533 O75533 215 231 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.001553 64.2 By MS/MS By MS/MS 2 2 6915100 3049500 3865600 1926 1166 2064 4429;4430;4431;4432 3748;3749;3750 3750 1556;3626;3627 3 LSSYTECYK LIPIAKKRLSSYTECY SSYTECYKWSSSPENA R L S Y K W 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 2 1 0 2 0 0 0 9 0 1149.5012 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 447 455 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.01223 69.65 By matching By MS/MS 1 1 5577100 2355200 3221900 1927 149 2065 4433;4434 3751 3751 203 1 LSTHSPFR RPSEWDKRLSTHSPFR LSTHSPFRTLNINGQI R L S F R T 0 1 0 0 0 0 0 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 8 0 943.48756 Q4VB86;P11171;A0A1B0GWG0 Q4VB86 466 473 EPB41 Protein 4.1 yes no 2 0.020669 74.841 By MS/MS By matching 1 1 2410900 1166700 1244200 1928 1257 2066 4435;4436 3752 3752 1653;1654;3649 1 LSTQIHELEDNWEQEK HLTKNNSKLSTQIHEL EDNWEQEKKIRAEVEK K L S E K K 0 0 1 1 0 2 4 0 1 1 2 1 0 0 0 1 1 1 0 0 0 0 16 0 1997.933 Q9H6N6 Q9H6N6 219 234 MYH16 Putative uncharacterized protein MYH16 yes yes 3 0.016108 45.094 By MS/MS By matching 1 1 1754200 844680 909550 1929 2010 2067 4437;4438 3753 3753 293 3929 0 LSVGSVTSRPSTPTLGTPT AGRITVPRLSVGSVTS TPTLGTPT________ R L S P T - 0 1 0 0 0 0 0 2 0 0 2 0 0 0 3 4 5 0 0 2 0 0 19 1 1856.9844 D6RIV9 D6RIV9 148 166 TAF9 yes yes 2 0.011637 40.952 By matching By MS/MS 1 1 563430 296440 266990 1930 541 2068 4439;4440 3754 3754 721;722;3395;3396;3397 1 LSVNTKPR GFSSQEMRLSVNTKPR LSVNTKPRIHMNGSRN R L S P R I 0 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 8 1 913.53451 Q8NDA2;A0A087WY63 Q8NDA2 1060 1067 HMCN2 Hemicentin-2 yes no 2 0.012838 54.982 By MS/MS 1 0 0 0 1931 1798 2069 4441 3755 3755 252 3860 1 LSVPTSDEEDEVPAPKPR ELMERLKKLSVPTSDE EVPAPKPRGGKKTKGG K L S P R G 1 1 0 2 0 0 3 0 0 0 1 1 0 0 4 2 1 0 0 2 0 0 18 1 1964.9691 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 105 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 8.8187E-47 140.45 By MS/MS By MS/MS 2 2 84257000 43582000 40675000 1932 1618 2070 4442;4443;4444;4445 3756;3757;3758;3759;3760;3761 3758 2249;3790 6 LSVQSNPSPQLR QLSVQQNKLSVQSNPS SNPSPQLRSVMKVESS K L S L R S 0 1 1 0 0 2 0 0 0 0 2 0 0 0 2 3 0 0 0 1 0 0 12 0 1324.7099 E9PBY7;E9PQ61;O75152 E9PBY7 125 136 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.0082352 62.166 By MS/MS By MS/MS 1 1 4328000 1911300 2416700 1933 610 2071 4446;4447 3762;3763 3763 839 2 LSYFLQNSSTPGKPK LLKDWKTRLSYFLQNS SSTPGKPKTGKKSKQQ R L S P K T 0 0 1 0 0 1 0 1 0 0 2 2 0 1 2 3 1 0 1 0 0 0 15 1 1665.8726 P41220 P41220 45 59 RGS2 Regulator of G-protein signaling 2 yes yes 3 0.0058155 48.053 By MS/MS By matching 1 1 3478600 1836300 1642300 1934 1351 2072 4448;4449 3764 3764 412 1772;1773;3684;4290 1 LTAASVGVQGSGWGWLGFNK SFDKFKEKLTAASVGV WGWLGFNKERG_____ K L T N K E 2 0 1 0 0 1 0 5 0 0 2 1 0 1 0 2 1 2 0 2 0 0 20 0 2034.0323 F5H3C5;F5H4R2;A0A0C4DFU1;F5GYZ5;A0A0C4DFU2;P04179 F5H3C5 89 108 SOD2 Superoxide dismutase;Superoxide dismutase [Mn], mitochondrial yes no 2 4.6075E-06 94.688 By MS/MS By matching 1 1 5408200 2620800 2787400 1935 198 2073 4450;4451 3765 3765 1 LTCLVTDLTTYDSVTISWTR IFLTKSTKLTCLVTDL SVTISWTRQNGEAVKT K L T T R Q 0 1 0 2 1 0 0 0 0 1 3 0 0 0 0 2 6 1 1 2 0 0 20 0 2344.1621 A0A087WYJ9;A0A1B0GUU9;P04220;P01871 A0A087WYJ9 241 260 IGHM Ig mu heavy chain disease protein;Ig mu chain C region yes no 2 2.7906E-19 95.631 By MS/MS By MS/MS 2 1 5857400 2680500 3176800 1936 82 2074 4452;4453;4454 3766;3767;3768;3769 3767 4 LTEGCSFR QPTGGKARLTEGCSFR LTEGCSFRRKQH____ R L T F R R 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 8 0 968.43857 P42677;C9J1C5;H0YMV8;Q71UM5 P42677 73 80 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 2 0.0065217 116.52 By MS/MS By MS/MS 1 1 16814000 8734800 8079300 1937 1356 2075 4455;4456 3770;3771 3770 1778 2 LTFDSSFSPNTGKK DQLARGLKLTFDSSFS FSPNTGKKNAKIKTGY K L T K K N 0 0 1 1 0 0 0 1 0 0 1 2 0 2 1 3 2 0 0 0 0 0 14 1 1527.7569 C9JI87;P21796 C9JI87 97 110 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 0.0081231 67.102 By MS/MS By MS/MS 1 1 16431000 5837800 10593000 1938 464 2076 4457;4458 3772;3773 3773 653 2 LTFDTTFSPNTGK DQICQGLKLTFDTTFS TFSPNTGKKSGKIKSS K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 1 4 0 0 0 0 0 13 0 1427.6933 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880 Q5JSD2 108 120 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2 2.3168E-09 117.08 By matching By MS/MS 1 1 2950000 893070 2056900 1939 130 2077 4459;4460 3774 3774 178 1 LTFDTTFSPNTGKK DQICQGLKLTFDTTFS FSPNTGKKSGKIKSSY K L T K K S 0 0 1 1 0 0 0 1 0 0 1 2 0 2 1 1 4 0 0 0 0 0 14 1 1555.7882 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880 Q5JSD2 108 121 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 3 5.1703E-05 92.773 By MS/MS By MS/MS 1 1 2787900 1208200 1579700 1940 130 2078 4461;4462 3775;3776;3777 3775 178 3 LTGSTSSLNK SLHGSSGKLTGSTSSL GSTSSLNKLSVQSSGN K L T N K L 0 0 1 0 0 0 0 1 0 0 2 1 0 0 0 3 2 0 0 0 0 0 10 0 1006.5295 Q9NV70 Q9NV70 467 476 EXOC1 Exocyst complex component 1 yes yes 2 0.019782 57.347 By MS/MS 1 415040 415040 0 1941 2058 2079 4463 3778 3778 2943 1 LTKPKSDESDEDTF GDGEELERLTKPKSDE DESDEDTF________ R L T T F - 0 0 0 3 0 0 2 0 0 0 1 2 0 1 1 2 2 0 0 0 0 0 14 2 1610.7312 Q9BS91 Q9BS91 411 424 SLC35A5 Probable UDP-sugar transporter protein SLC35A5 yes yes 2 0.0065781 74.966 By matching By MS/MS 1 1 2381200 1408300 972870 1942 1958 2080 4464;4465 3779 3779 2770 1 LTMQITALNENLGTVK KHEENEAKLTMQITAL NENLGTVKKEWQSSQR K L T V K K 1 0 2 0 0 1 1 1 0 1 3 1 1 0 0 0 3 0 0 1 0 0 16 0 1744.9393 Q15075 Q15075 1239 1254 EEA1 Early endosome antigen 1 yes yes 2 0.01 50.392 By MS/MS By matching 1 1 1424500 707780 716730 1943 1544 2081 4466;4467 3780 3780 417 3763;3764 1 LTPSPDIIVLSDNEASSPR RSEPERGRLTPSPDII DNEASSPRSSSRMEER R L T P R S 1 1 1 2 0 0 1 0 0 2 2 0 0 0 3 4 1 0 0 1 0 0 19 0 2010.0269 A0A0U1RRK3;A0A0U1RR34;A0A0U1RRM1;Q8WXI9 A0A0U1RRK3 119 137 GATAD2B Transcriptional repressor p66-beta yes no 3 0.014844 41.367 By MS/MS By matching 1 1 738550 341770 396780 1944 272 2082 4468;4469 3781 3781 386;387;388 1 LTPTSSSRLSQR SNAGGKRKLTPTSSSR SSSRLSQRQIWALALT K L T Q R Q 0 2 0 0 0 1 0 0 0 0 2 0 0 0 1 4 2 0 0 0 0 0 12 1 1331.7157 H0YBS6 H0YBS6 56 67 HSF4 yes yes 2 0.016316 42.317 By MS/MS 1 0 0 0 1945 869 2083 4470 3782 3782 1165;1166;1167;3520 1 LTPVSLSNSPIK VTKELYVKLTPVSLSN SLSNSPIKGADCQEVP K L T I K G 0 0 1 0 0 0 0 0 0 1 2 1 0 0 2 3 1 0 0 1 0 0 12 0 1254.7184 P46100 P46100 590 601 ATRX Transcriptional regulator ATRX yes yes 2 0.0016468 80.69 By MS/MS By MS/MS 1 1 3160200 1511800 1648400 1946 1364 2084 4471;4472 3783;3784 3783 1798;1799;1800 2 LTPVSLSNSPIKGADCQEVPQDKDGYK VTKELYVKLTPVSLSN PQDKDGYKSCGLNPKL K L T Y K S 1 0 1 3 1 2 1 2 0 1 2 3 0 0 3 3 1 0 1 2 0 0 27 2 2945.4441 P46100 P46100 590 616 ATRX Transcriptional regulator ATRX yes yes 3 0.010825 48.331 By MS/MS By matching 1 1 14256000 7939500 6316000 1947 1364 2085 4473;4474 3785 3785 1798;1799;1800 1 LTPVSPESSSTEEK EHGGKRSRLTPVSPES ESSSTEEKSSSQPSSC R L T E K S 0 0 0 0 0 0 3 0 0 0 1 1 0 0 2 4 2 0 0 1 0 0 14 0 1489.7148 E7EMC7;Q13501 E7EMC7 268 281 SQSTM1 Sequestosome-1 yes no 2 0.0002796 85.163 By MS/MS By MS/MS 1 1 7501800 3482700 4019100 1948 559 2086 4475;4476 3786;3787 3787 739 2 LTQQDTSVLQLK IKDALQQRLTQQDTSV DTSVLQLKQELLRANM R L T L K Q 0 0 0 1 0 3 0 0 0 0 3 1 0 0 0 1 2 0 0 1 0 0 12 0 1372.7562 Q155Q3 Q155Q3 378 389 DIXDC1 Dixin yes yes 2 0.017723 48.277 By MS/MS 1 0 0 0 1949 1560 2087 4477 3788 3788 2151;3767 1 LTRPAASPAVGEK SPSPAREKLTRPAASP ASPAVGEKLKKTEPAA K L T E K L 3 1 0 0 0 0 1 1 0 0 1 1 0 0 2 1 1 0 0 1 0 0 13 1 1295.7197 F5H0Q6;A0A0A0MQS2;Q8N2M8 F5H0Q6 541 553 CLASRP CLK4-associating serine/arginine rich protein yes no 2;3 0.00022754 82.121 By MS/MS By MS/MS 2 2 9109100 4162900 4946200 1950 127 2088 4478;4479;4480;4481 3789;3790;3791 3791 172 3 LTSQSEAMALQSIR ESSKNKSRLTSQSEAM AMALQSIRNMRGNSHC R L T I R N 2 1 0 0 0 2 1 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 14 0 1533.7821 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C0A7 A0A087X1U1 496 509 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.019137 49.5 By matching By MS/MS 1 1 2598300 1229700 1368600 1951 111 2089 4482;4483 3792 3792 16 3243 1 LTSSLEAGLQR LTDPPTARLTSSLEAG SLEAGLQRDLLMHSRR R L T Q R D 1 1 0 0 0 1 1 1 0 0 3 0 0 0 0 2 1 0 0 0 0 0 11 0 1173.6354 B7Z879;A0A087WXL6;Q9H270 B7Z879 911 921 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes no 2 0.008428 64.64 By matching By MS/MS 1 1 831210 392610 438600 1952 75 2090 4484;4485 3793 3793 94 1 LTTTGQVTSPVK KKAVVQAKLTTTGQVT GQVTSPVKGASFVTST K L T V K G 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 1 4 0 0 2 0 0 12 0 1230.682 P49916;K7ENR9;K7ERZ5 P49916 202 213 LIG3 DNA ligase 3 yes no 2 2.2137E-78 173.59 By MS/MS By MS/MS 1 1 71095000 29251000 41843000 1953 1387 2091 4486;4487 3794;3795 3794 1871;3707 2 LTTTGQVTSPVKGASFVTSTNPR KKAVVQAKLTTTGQVT FVTSTNPRKFSGFSAK K L T P R K 1 1 1 0 0 1 0 2 0 0 1 1 0 1 2 3 6 0 0 3 0 0 23 1 2348.2336 P49916;K7ENR9;K7ERZ5 P49916 202 224 LIG3 DNA ligase 3 yes no 3 0.0018392 66.308 By matching By MS/MS 1 1 18524000 7947400 10577000 1954 1387 2092 4488;4489 3796 3796 1871;3707 1 LTWHSCPEDEAQ VIAFYEERLTWHSCPE SCPEDEAQ________ R L T A Q - 1 0 0 1 1 1 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 0 12 0 1471.6038 Q13185 Q13185 172 183 CBX3 Chromobox protein homolog 3 yes yes 2 0.0016394 80.737 By MS/MS By MS/MS 2 2 18986000 9304000 9681900 1955 1494 2093;2094 4490;4491;4492;4493 3797;3798 3797 2043 2 LVAIVDVIDQNR SFGPHAGKLVAIVDVI VDVIDQNRALVDGPCT K L V N R A 1 1 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 3 0 0 12 0 1353.7616 P50914;E7EPB3 P50914 24 35 RPL14 60S ribosomal protein L14 yes no 2 0.0021187 80.916 By matching By MS/MS 1 1 1686300 809910 876380 1956 1391 2095 4494;4495 3799 3799 1 LVDYLDVGFDTTR YVRTLIERLVDYLDVG DVGFDTTRVAVIQFSD R L V T R V 0 1 0 3 0 0 0 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1512.746 E7ENL6;P12111 E7ENL6 651 663 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.00075201 78.653 By MS/MS By MS/MS 1 2 1135500 372990 762540 1957 567 2096 4496;4497;4498 3800;3801 3800 2 LVEQANSPK QEELASGKLVEQANSP VEQANSPKHQWGEEEP K L V P K H 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 9 0 984.52401 O95391 O95391 209 217 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 2 0.0017631 108.47 By MS/MS By MS/MS 1 2 2805500 1020700 1784800 1958 1191 2097 4499;4500;4501 3802;3803 3803 1590 2 LVEWIIVQCGPDVGRPDR YDEELEERLVEWIIVQ PDVGRPDRGRLGFQVW R L V D R G 0 2 0 2 1 1 1 2 0 2 1 0 0 0 2 0 0 1 0 3 0 0 18 1 2108.0837 E9PJ32;Q01995 E9PJ32 30 47 TAGLN Transgelin yes no 3 0.0048651 52.008 By MS/MS By matching 1 1 2710700 1376600 1334100 1959 644 2098 4502;4503 3804 3804 1 LVIITAGAR YNVTANSKLVIITAGA VIITAGARQQEGESRL K L V A R Q 2 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 912.57565 P00338;F5GXH2;F5GYU2;F5GXY2 P00338 91 99 LDHA L-lactate dehydrogenase A chain yes no 2 0.012389 75.109 By MS/MS By matching 1 1 866850 346870 519980 1960 1201 2099 4504;4505 3805 3805 1 LVLAESPQPK GEHQQNSKLVLAESPQ LAESPQPKGKNK____ K L V P K G 1 0 0 0 0 1 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1080.6179 E7EUR8;A0A1B0GVL4;P78312 E7EUR8 993 1002 FAM193A Protein FAM193A yes no 2 0.0055111 80.014 By MS/MS By matching 1 1 5301000 3078900 2222100 1961 299 2100 4506;4507 3806 3806 426 1 LVLEVAQHLGESTVR EVQGRETRLVLEVAQH HLGESTVRTIAMDGTE R L V V R T 1 1 0 0 0 1 2 1 1 0 3 0 0 0 0 1 1 0 0 3 0 0 15 0 1649.9101 P06576 P06576 95 109 ATP5B ATP synthase subunit beta, mitochondrial yes yes 3 0.013586 51.546 By MS/MS 1 343460 343460 0 1962 1226 2101 4508 3807 3807 1 LVLLNAIYLSAK DSLPSDTRLVLLNAIY NAIYLSAKWKTTFDPK R L V A K W 2 0 1 0 0 0 0 0 0 1 4 1 0 0 0 1 0 0 1 1 0 0 12 0 1316.8068 H9KV48;P05155 H9KV48 287 298 SERPING1 Plasma protease C1 inhibitor yes no 2 0.014892 69.979 By MS/MS By MS/MS 1 1 3342400 2394500 947900 1963 977 2102 4509;4510 3808;3809 3809 2 LVLSQSTSTSR L V S R 0 1 0 0 0 1 0 0 0 0 2 0 0 0 0 4 2 0 0 1 0 0 11 0 1177.6303 REV__M0QZD8 yes yes 2 0.01901 56.434 By MS/MS By matching 2 1 85431000 61171000 24261000 + 1964 2202 2103 4511;4512;4513 3810 3810 3188;3189;3993;3994 1 LVLVGDGGTGK RARRRFWKLVLVGDGG VGDGGTGKTTFVKRHL K L V G K T 0 0 0 1 0 0 0 4 0 0 2 1 0 0 0 0 1 0 0 2 0 0 11 0 1014.571 H0YFC6;B5MDF5;J3KQE5;P62826 H0YFC6 28 38 RAN GTP-binding nuclear protein Ran yes no 2 0.0061513 74.165 By MS/MS By MS/MS 1 1 1571700 618680 953060 1965 396 2104 4514;4515 3811;3812 3811 2 LVNEAPVYSVYSK EALELYNKLVNEAPVY PVYSVYSKLHPPAHYP K L V S K L 1 0 1 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 2 3 0 0 13 0 1467.7609 O75886 O75886 364 376 STAM2 Signal transducing adapter molecule 2 yes yes 2 0.010615 59.265 By MS/MS By matching 1 1 3929900 1735000 2194900 1966 1170 2105 4516;4517 3813 3813 1562 1 LVPSQEETKLSVEESEAAGDGVDTK LEEKVRAKLVPSQEET AGDGVDTKVAQGATEK K L V T K V 2 0 0 2 0 1 5 2 0 0 2 2 0 0 1 3 2 0 0 3 0 0 25 1 2617.2607 P49321 P49321 418 442 NASP Nuclear autoantigenic sperm protein yes yes 3 0.0082352 46.558 By MS/MS By matching 1 1 3114000 2694600 419400 1967 1378 2106 4518;4519 3814 3814 1839 1 LVPVGYGIK GLVWGSSKLVPVGYGI VPVGYGIKKLQIQCVV K L V I K K 0 0 0 0 0 0 0 2 0 1 1 1 0 0 1 0 0 0 1 2 0 0 9 0 944.5695 P24534 P24534 177 185 EEF1B2 Elongation factor 1-beta yes yes 2 0.019178 50.632 By matching By MS/MS 1 1 1623900 702580 921350 1968 1309 2107 4520;4521 3815 3815 4278 1 LVQAFQFTDK RSVDETLRLVQAFQFT QAFQFTDKHGEVCPAG R L V D K H 1 0 0 1 0 2 0 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 10 0 1195.6237 A0A0A0MRQ5;A0A0A0MSI0;Q06830 A0A0A0MRQ5 57 66 PRDX1 Peroxiredoxin-1 yes no 2 0.016833 61.679 By matching By MS/MS 1 1 862530 449090 413440 1969 150 2108 4522;4523 3816 3816 1 LVQDVANNTNEEAGDGTTTATVLAR KYKNIGAKLVQDVANN TTATVLARSIAKEGFE K L V A R S 4 1 3 2 0 1 2 2 0 0 2 0 0 0 0 0 5 0 0 3 0 0 25 0 2559.2413 P10809;C9JL25;E7EXB4;E7ESH4 P10809 97 121 HSPD1 60 kDa heat shock protein, mitochondrial yes no 3 1.654E-05 87.468 By matching By MS/MS 1 1 8140000 2888600 5251300 1970 1253 2109 4524;4525 3817 3817 1 LVRLSSDSFAR SDPALRSKLVRLSSDS LSSDSFARLVELFCSR K L V A R L 1 2 0 1 0 0 0 0 0 0 2 0 0 1 0 3 0 0 0 1 0 0 11 1 1249.6779 A0A087WSV0;Q9HB09 A0A087WSV0 154 164 BCL2L12 Bcl-2-like protein 12 yes no 2 0.015317 69.456 By matching By MS/MS 1 1 7177400 2115600 5061800 1971 19 2110 4526;4527 3818 3818 21 1 LVSFHDDSDEDLLHI QKTVSSTKLVSFHDDS SDEDLLHI________ K L V H I - 0 0 0 4 0 0 1 0 2 1 3 0 0 1 0 2 0 0 0 1 0 0 15 0 1753.8159 P11717 P11717 2477 2491 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2;3 0.00011634 78.902 By MS/MS By MS/MS 2 1 5753500 2708500 3045000 1972 1260 2111;2112 4528;4529;4530 3819;3820;3821 3819 1665;1666 3 LVTISPNNK QSPSVIRRLVTISPNN VTISPNNKPKKAQTYY R L V N K P 0 0 2 0 0 0 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 9 0 984.5604 H0YDE6;Q6IQ26 H0YDE6 140 148 DENND5A DENN domain-containing protein 5A yes no 2 3.1448E-07 90.149 By matching By MS/MS 1 1 1347300 641220 706070 1973 874 2113 4531;4532 3822 3822 128 1171 0 LVTSGAESGNLNTSPSSNQTR DSFKQLAKLVTSGAES SPSSNQTRNSEKFEKP K L V T R N 1 1 3 0 0 1 1 2 0 0 2 0 0 0 1 5 3 0 0 1 0 0 21 0 2119.0142 Q8NHV4 Q8NHV4 503 523 NEDD1 Protein NEDD1 yes yes 3 0.017131 42.64 By matching By MS/MS 1 1 4192800 1872700 2320100 1974 1808 2114 4533;4534 3823 3823 2548 1 LVYENINGLSIPSASGVR RDAPSVNKLVYENING IPSASGVRRGRLTSTS K L V V R R 1 1 2 0 0 0 1 2 0 2 2 0 0 0 1 3 0 0 1 2 0 0 18 0 1888.0054 Q8WU20 Q8WU20 304 321 FRS2 Fibroblast growth factor receptor substrate 2 yes yes 2 0.017457 43.297 By MS/MS By matching 1 1 741780 404160 337620 1975 1831 2115 4535;4536 3824 3824 4399 1 LWAYLTIQELLAK MLENHVERLWAYLTIQ TIQELLAKRMKVDREE R L W A K R 2 0 0 0 0 1 1 0 0 1 4 1 0 0 0 0 1 1 1 0 0 0 13 0 1560.8916 P19827;H7C0N0;CON__Q0VCM5 P19827 565 577 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 2 1.6279E-06 110.53 By MS/MS By MS/MS 1 1 6146900 3908700 2238200 1976 1296 2116 4537;4538 3825;3826 3825 2 LWSGYSLLYFEGQEK MCPVGMNKLWSGYSLL LYFEGQEKAHNQDLGL K L W E K A 0 0 0 0 0 1 2 2 0 0 3 1 0 1 0 2 0 1 2 0 0 0 15 0 1818.8829 P08572 P08572 1511 1525 COL4A2 Collagen alpha-2(IV) chain;Canstatin yes yes 2 2.0748E-07 105.17 By MS/MS By MS/MS 1 1 5346400 2803000 2543400 1977 1240 2117 4539;4540 3827;3828 3828 2 LYDLNMPAYVK SFVDPGERLYDLNMPA LNMPAYVKF_______ R L Y V K F 1 0 1 1 0 0 0 0 0 0 2 1 1 0 1 0 0 0 2 1 0 0 11 0 1325.669 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333 C9K098 104 114 NCK1 Cytoplasmic protein NCK1 yes no 2 0.0049203 61.65 By MS/MS By matching 1 1 1373800 627070 746690 1978 450 2118 4541;4542 3829 3829 4109 1 LYDLPDEPFTR IRKKWNSKLYDLPDEP LPDEPFTRQFYFVHSA K L Y T R Q 0 1 0 2 0 0 1 0 0 0 2 0 0 1 2 0 1 0 1 0 0 0 11 0 1364.6612 Q96NW4 Q96NW4 927 937 ANKRD27 Ankyrin repeat domain-containing protein 27 yes yes 2 0.00072454 96.89 By MS/MS By MS/MS 1 1 2269600 1073800 1195800 1979 1913 2119 4543;4544 3830;3831 3830 4422 2 LYEALTPVH MVELAAQRLYEALTPV YEALTPVH________ R L Y V H - 1 0 0 0 0 0 1 0 1 0 2 0 0 0 1 0 1 0 1 1 0 0 9 0 1041.5495 G5E9W3;Q9UKF6 G5E9W3 639 647 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 2 0.0044812 99.802 By MS/MS 1 632430 632430 0 1980 812 2120 4545 3832 3832 3503 1 LYEEDDLDRLEQMEDSEGTVR FKPGLDMRLYEEDDLD EDSEGTVRQIGAFSEG R L Y V R Q 0 2 0 4 0 1 5 1 0 0 3 0 1 0 0 1 1 0 1 1 0 0 21 1 2541.1177 H0YFE4;Q86W92 H0YFE4 181 201 PPFIBP1 Liprin-beta-1 yes no 3 1.0995E-06 96.544 By MS/MS By matching 2 1 6671800 4701800 1970000 1981 883 2121;2122 4546;4547;4548 3833;3834;3835 3834 106 4188 3 LYEQLSGK EWDDYVPKLYEQLSGK LYEQLSGK________ K L Y G K - 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 8 0 936.49165 P30086 P30086 180 187 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 2 0.0029208 101.6 By MS/MS By MS/MS 1 1 1298700 736570 562130 1982 1327 2123 4549;4550 3836;3837 3837 4281 2 LYEWISIDKDEAGAK ERLGTRERLYEWISID DKDEAGAKSKAPSVSR R L Y A K S 2 0 0 2 0 0 2 1 0 2 1 2 0 0 0 1 0 1 1 0 0 0 15 1 1736.8621 A0A0A0MTP6;O15357 A0A0A0MTP6 819 833 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 2.2074E-05 96.103 By MS/MS By MS/MS 1 1 4859900 2207300 2652600 1983 182 2124 4551;4552 3838;3839 3839 4030 2 LYFCVDR GKSGGRFRLYFCVDRG RLYFCVDRGATKECKE R L Y D R G 0 1 0 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 7 0 971.45349 O14654 O14654 655 661 IRS4 Insulin receptor substrate 4 yes yes 2 0.0089505 85.265 By MS/MS By MS/MS 1 1 12130000 5915000 6214900 1984 1094 2125 4553;4554 3840;3841 3840 4231 2 LYGSPTQIGPSYR LPPLQTPKLYGSPTQI TQIGPSYRGMINVSTS K L Y Y R G 0 1 0 0 0 1 0 2 0 1 1 0 0 0 2 2 1 0 2 0 0 0 13 0 1437.7252 E7EWD6;Q76L83 E7EWD6 1288 1300 ASXL2 Putative Polycomb group protein ASXL2 yes no 2 0.018628 53.754 By MS/MS By MS/MS 1 1 2088100 860770 1227300 1985 600 2126 4555;4556 3842;3843 3842 824 2 LYGSVCDLR PPRSEVKRLYGSVCDL YGSVCDLRTNKLPGSP R L Y L R T 0 1 0 1 1 0 0 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 9 0 1081.5226 Q8N9U0 Q8N9U0 153 161 TC2N Tandem C2 domains nuclear protein yes yes 2 0.0073956 66.073 By MS/MS By MS/MS 1 1 1126000 597790 528170 1986 1786 2127 4557;4558 3844;3845 3845 4395 2 LYINHTPPPLSK ELKESSAKLYINHTPP HTPPPLSKSKEREMDK K L Y S K S 0 0 1 0 0 0 0 0 1 1 2 1 0 0 3 1 1 0 1 0 0 0 12 0 1378.7609 H0Y7U4;A0A0C4DG98;Q8NI27;H0Y594;B7ZBA0 H0Y7U4 233 244 THOC2 THO complex subunit 2 yes no 2 0.004383 81.565 By MS/MS By matching 1 1 700000 315000 385000 1987 208 2128 4559;4560 3846 3846 3291 1 LYISKMKSEVK EEEFTMARLYISKMKS SKMKSEVKSLVNRSKQ R L Y V K S 0 0 0 0 0 0 1 0 0 1 1 3 1 0 0 2 0 0 1 1 0 0 11 2 1324.7425 A0A0G2JMZ6;O60282;P33176 A0A0G2JMZ6 492 502 KIF5C;KIF5B Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain yes no 2 0.012023 54.343 By MS/MS By matching 1 1 2223800 1323300 900500 1988 247 2129 4561;4562 3847 3847 361;4045 1 LYLPQEPTSEETPR TPPPKPPRLYLPQEPT PTSEETPRTKRPHMEP R L Y P R T 0 1 0 0 0 1 3 0 0 0 2 0 0 0 3 1 2 0 1 0 0 0 14 0 1658.8152 Q6P5Z2 Q6P5Z2 516 529 PKN3 Serine/threonine-protein kinase N3 yes yes 2 0.0020822 66.289 By MS/MS By MS/MS 1 1 3157500 1284900 1872600 1989 1680 2130 4563;4564 3848;3849 3849 4378 2 LYLVQGTQVYVFLTK AAFSWEEKLYLVQGTQ QVYVFLTKGGYTLVSG K L Y T K G 0 0 0 0 0 2 0 1 0 0 3 1 0 1 0 0 2 0 2 3 0 0 15 0 1770.992 P02790 P02790 318 332 HPX Hemopexin yes yes 2 4.2463E-23 138.89 By MS/MS By MS/MS 1 1 12059000 5333500 6725200 1990 1214 2131 4565;4566 3850;3851 3851 2 LYNTLDDLLLYINAR GRLLEYYRLYNTLDDL LLLYINARELRITYGQ R L Y A R E 1 1 2 2 0 0 0 0 0 1 5 0 0 0 0 0 1 0 2 0 0 0 15 0 1808.9672 Q6UX06 Q6UX06 305 319 OLFM4 Olfactomedin-4 yes yes 2;3 1.8198E-22 134.98 By MS/MS By matching 3 1 25748000 23991000 1757400 1991 1692 2132;2133 4567;4568;4569;4570 3852;3853;3854 3853 229 3 LYVYNDGYLLNYDLSVLQKPQ NYNPFDQKLYVYNDGY LSVLQKPQ________ K L Y P Q - 0 0 2 2 0 2 0 1 0 0 5 1 0 0 1 1 0 0 4 2 0 0 21 1 2517.2791 Q6UX06 Q6UX06 490 510 OLFM4 Olfactomedin-4 yes yes 2;3 5.2009E-45 99.409 By MS/MS By MS/MS 2 2 53899000 27847000 26052000 1992 1692 2134 4571;4572;4573;4574 3855;3856;3857 3855 3 MAEESSSSSSSSSPTAATSQQQQLK EFVGFDAKMAEESSSS TSQQQQLKNKSILISS K M A L K N 3 0 0 0 0 4 2 0 0 0 1 1 1 0 1 10 2 0 0 0 0 0 25 0 2543.1293 K4DI93;Q13620 K4DI93 121 145 CUL4B Cullin-4B yes no 3 0.0046269 53.355 By MS/MS By MS/MS 1 1 8565100 3830600 4734500 1993 1033 2135 4575;4576 3858;3859 3859 1371;3570 2 MAGVSFSGHR ________________ GVSFSGHRLELLAAYE - M A H R L 1 1 0 0 0 0 0 2 1 0 0 0 1 1 0 2 0 0 0 1 0 0 10 0 1047.492 Q16643;D6R9W4;D6RFI1 Q16643 1 10 DBN1 Drebrin yes no 1 0.014268 40.589 By MS/MS By matching 1 1 2984700 1744400 1240300 1994 1574 2136 4577;4578 3860 3860 225 2174;2175 1 MALDIEIATYR YQDLLNVKMALDIEIA DIEIATYRKLLEGEES K M A Y R K 2 1 0 1 0 0 1 0 0 2 1 0 1 0 0 0 1 0 1 0 0 0 11 0 1294.6591 P08670;B0YJC4;B0YJC5;H7C5W5;P41219 P08670 391 401 VIM;PRPH Vimentin;Peripherin yes no 2 2.0696E-11 101.97 By MS/MS By MS/MS 1 2 231970 231970 0 1995 1243 2137;2138 4579;4580;4581 3861;3862;3863 3863 154 3 MANSSPVLSK SAGRSQKKMANSSPVL NSSPVLSKVPGYGLQV K M A S K V 1 0 1 0 0 0 0 0 0 0 1 1 1 0 1 3 0 0 0 1 0 0 10 0 1032.5274 Q9NXE8 Q9NXE8 214 223 CWC25 Pre-mRNA-splicing factor CWC25 homolog yes yes 2 0.0022046 95.618 By MS/MS By MS/MS 1 1 2077200 920210 1156900 1996 2068 2139 4582;4583 3864;3865;3866 3864 2955 3 MAPALSGANLTSPR PASLTSARMAPALSGA GANLTSPRVPLSAYER R M A P R V 3 1 1 0 0 0 0 1 0 0 2 0 1 0 2 2 1 0 0 0 0 0 14 0 1384.7133 Q9UQ35 Q9UQ35 2371 2384 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 4.1485E-06 101.62 By MS/MS By MS/MS 1 2 5524200 1702500 3821800 1997 2134 2140;2141 4584;4585;4586 3867;3868;3869 3867 308 3072;3964 3 MAPPVDDLSPK NCKICIGRMAPPVDDL PVDDLSPKKVKVVVGV R M A P K K 1 0 0 2 0 0 0 0 0 0 1 1 1 0 3 1 0 0 0 1 0 0 11 0 1168.5798 E7ER40;E7EVH3;Q92576 E7ER40 394 404 PHF3 PHD finger protein 3 yes no 2 1.9336E-05 123.95 By MS/MS By MS/MS 2 2 19836000 9446900 10389000 1998 578 2142;2143 4587;4588;4589;4590 3870;3871;3872;3873;3874;3875 3871 69 772 6 MAPTPIPTRSPSDSSTASTPVAEQIER SHLDSHRRMAPTPIPT PVAEQIERALDEVTSS R M A E R A 3 2 0 1 0 1 2 0 0 2 0 0 1 0 5 5 4 0 0 1 0 0 27 1 2825.3865 Q16643;D6R9Q9 Q16643 328 354 DBN1 Drebrin yes no 3 0.0047218 53.481 By MS/MS By MS/MS 2 2 27539000 12345000 15194000 1999 1574 2144;2145 4591;4592;4593;4594 3876;3877 3876 226 2176;2177;2178;3772;3773 2 MAVTFIGNSTAIQELFK DIPPRGLKMAVTFIGN TAIQELFKRISEQFTA K M A F K R 2 0 1 0 0 1 1 1 0 2 1 1 1 2 0 1 2 0 0 1 0 0 17 0 1868.9706 Q5JP53;P07437;Q5ST81 Q5JP53 345 361 TUBB Tubulin beta chain yes no 2 3.9425E-208 206.36 By MS/MS By MS/MS 3 3 55526000 34432000 21095000 2000 1232 2146;2147;2148 4595;4596;4597;4598;4599;4600 3878;3879;3880;3881;3882 3880 166 151 5 MDFDQTDNGFLQLNHVRVPR IIGDIGPKMDFDQTDN LNHVRVPRENMLSRFA K M D P R E 0 2 2 3 0 2 0 1 1 0 2 0 1 2 1 0 1 0 0 2 0 0 20 1 2401.1597 Q99424 Q99424 245 264 ACOX2 Peroxisomal acyl-coenzyme A oxidase 2 yes yes 3 0.017506 46.249 By matching By MS/MS 1 1 20039000 10993000 9046500 2001 1936 2149 4601;4602 3883 3883 274 3901 1 MDKNASTFEDVTQVSSAYQK KYGVQKDRMDKNASTF QVSSAYQKTVPVEAVT R M D Q K T 2 0 1 2 0 2 1 0 0 0 0 2 1 1 0 3 2 0 1 2 0 0 20 1 2248.0318 Q14247 Q14247 317 336 CTTN Src substrate cortactin yes yes 3 0.0032781 84.166 By MS/MS By MS/MS 2 1 12158000 8340900 3817100 2002 1519 2150;2151 4603;4604;4605 3884;3885;3886 3884 215 2085;4353 3 MDPIYHTR LDIFGPQKMDPIYHTR MDPIYHTRELPTSSAI K M D T R E 0 1 0 1 0 0 0 0 1 1 0 0 1 0 1 0 1 0 1 0 0 0 8 0 1031.4859 Q12923 Q12923 359 366 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.010187 60.118 By MS/MS 1 0 0 0 2003 1483 2152 4606 3887 3887 4340 1 MDRMASSMKQVPNPLPK ________________ QVPNPLPKVLSRRGVG - M D P K V 1 1 1 1 0 1 0 0 0 0 1 2 3 0 3 2 0 0 0 1 0 0 17 2 1928.9634 O00291 O00291 1 17 HIP1 Huntingtin-interacting protein 1 yes yes 2 0.019247 43.382 By MS/MS 1 0 0 0 2004 1083 2153 4607 3888 3888 147 125 1 MDSDEDEKEGEEEKVAK EEEHKKQKMDSDEDEK GEEEKVAKRKAAVLSD K M D A K R 1 0 0 3 0 0 6 1 0 0 0 3 1 0 0 1 0 0 0 1 0 0 17 2 1966.8313 Q96ST2 Q96ST2 375 391 IWS1 Protein IWS1 homolog yes yes 3 0.0028994 57.788 By MS/MS By matching 1 1 4046100 2635500 1410600 2005 1930 2154 4608;4609 3889 3889 278 2726 1 MDSFDEDLAR REAQVNVRMDSFDEDL SFDEDLARPSGLLAQE R M D A R P 1 1 0 3 0 0 1 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 10 0 1197.4972 Q9Y2W1 Q9Y2W1 573 582 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.017993 67.214 By matching By MS/MS 1 1 1886700 1025700 861030 2006 2146 2155 4610;4611 3890 3890 313 3120 1 MDSNFGLAGLPGSPK PVDMESTRMDSNFGLA AGLPGSPKKRVRIECK R M D P K K 1 0 1 1 0 0 0 3 0 0 2 1 1 1 2 2 0 0 0 0 0 0 15 0 1489.7235 O43463 O43463 379 393 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 yes yes 2 0.005134 68.329 By MS/MS By MS/MS 1 1 1975700 1072300 903460 2007 1124 2156 4612;4613 3891;3892 3891 135 1495 2 MEGNMPDGTLGSWFKITVPFGIK EQKPPERRMEGNMPDG ITVPFGIKYNEKWLLN R M E I K Y 0 0 1 1 0 0 1 4 0 2 1 2 2 2 2 1 2 1 0 1 0 0 23 1 2524.2494 Q9H4D5 Q9H4D5 101 123 NXF3 Nuclear RNA export factor 3 yes yes 3 0.003242 51.819 By MS/MS 1 1531600 0 1531600 2008 2006 2157 4614 3893 3893 292 289 3925 1 MEKDIMSVLSYLK DLKKKQCKMEKDIMSV MSVLSYLKKQDQEKDN K M E L K K 0 0 0 1 0 0 1 0 0 1 2 2 2 0 0 2 0 0 1 1 0 0 13 1 1555.799 Q8ND07 Q8ND07 74 86 CCDC176 Basal body-orientation factor 1 yes yes 2 0.019671 44.863 By MS/MS By matching 1 1 1187100 638180 548880 2009 1794 2158 4615;4616 3894 3894 260 2519;2520 1 MENYELIHSSR FGNKTTGKMENYELIH YELIHSSRVKFTYPSE K M E S R V 0 1 1 0 0 0 2 0 1 1 1 0 1 0 0 2 0 0 1 0 0 0 11 0 1377.6347 Q9Y2I1 Q9Y2I1 1304 1314 NISCH Nischarin yes yes 2;3 1.5848E-16 145.91 By MS/MS By MS/MS 2 2 4236700 1858700 2378000 2010 2144 2159 4617;4618;4619;4620 3895;3896;3897 3896 4465 3 METVSNASSSSNPSSPGR QSQTKSSRMETVSNAS SNPSSPGRIKGRLDSS R M E G R I 1 1 2 0 0 0 1 1 0 0 0 0 1 0 2 7 1 0 0 1 0 0 18 0 1793.785 Q9NTI5;A9IYQ1 Q9NTI5 1152 1169 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 2.4884E-47 142.88 By MS/MS By MS/MS 1 1 6291900 3064900 3227000 2011 2054 2160 4621;4622 3898;3899 3898 297 2936;2937 2 METVSNASSSSNPSSPGRIK QSQTKSSRMETVSNAS PSSPGRIKGRLDSSEM R M E I K G 1 1 2 0 0 0 1 1 0 1 0 1 1 0 2 7 1 0 0 1 0 0 20 1 2034.964 Q9NTI5;A9IYQ1 Q9NTI5 1152 1171 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 0.0015492 81.808 By MS/MS By MS/MS 1 1 4736900 2188300 2548600 2012 2054 2161 4623;4624 3900;3901 3901 2936;2937 2 MFELLFTSSR IFHISADRMFELLFTS ELLFTSSRFMQKFASS R M F S R F 0 1 0 0 0 0 1 0 0 0 2 0 1 2 0 2 1 0 0 0 0 0 10 0 1229.6114 C9J7B8;E9PHT3;Q8IYS0 C9J7B8 137 146 GRAMD1C GRAM domain-containing protein 1C yes no 2 0.017023 58.132 By matching By MS/MS 1 1 2049500 1242100 807390 2013 447 2162 4625;4626 3902 3902 641;3367 0 MFLSFPTTK YGAEALERMFLSFPTT FLSFPTTKTYFPHFDL R M F T K T 0 0 0 0 0 0 0 0 0 0 1 1 1 2 1 1 2 0 0 0 0 0 9 0 1070.5471 CON__P01966;G3V1N2;P69905 G3V1N2 33 41 HBA2;HBA1 Hemoglobin subunit alpha no no 2 0.010268 90.657 By MS/MS 1 362140 362140 0 + 2014 501;781 2163 4627 3903 3903 59 1 MFTIMMTNNVLPVQKAASR IYYRFLQRMFTIMMTN PVQKAASRTLCIFLRY R M F S R T 2 1 2 0 0 1 0 0 0 1 1 1 3 1 1 1 2 0 0 2 0 0 19 1 2151.1003 Q6NUP7 Q6NUP7 530 548 PPP4R4 Serine/threonine-protein phosphatase 4 regulatory subunit 4 yes yes 3 0.021743 40.493 By MS/MS By matching 1 1 2091400 1212100 879310 2015 1673 2164 4628;4629 3904 3904 227 2340 0 MGANSLER ________________ MGANSLERMGPAMGPA R M G E R M 1 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 8 0 876.41235 M0QY96;M0R2I7;M0QZM1;A0A087X0X3;P52272 M0QY96 8 15 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.0092982 82.831 By MS/MS By MS/MS 1 1 933950 933950 0 2016 103 2165 4630;4631 3905;3906 3906 136 2 MGESDDSILR AICGAIRRMGESDDSI ESDDSILRLAKADGIV R M G L R L 0 1 0 2 0 0 1 1 0 1 1 0 1 0 0 2 0 0 0 0 0 0 10 0 1121.5023 Q8WVC2;P63220 Q8WVC2 62 71 RPS21 40S ribosomal protein S21 yes no 2 0.00059108 86.67 By matching By MS/MS 1 2 1113400 541660 571770 2017 1437 2166;2167 4632;4633;4634 3907;3908 3908 193 2 MGLLSPSGIGGVSPR PRALPPGRMGLLSPSG GIGGVSPRHALTSPSL R M G P R H 0 1 0 0 0 0 0 4 0 1 2 0 1 0 2 3 0 0 0 1 0 0 15 0 1426.7602 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 588 602 SAMD4B Protein Smaug homolog 2 yes no 2 0.011402 54.471 By MS/MS By matching 1 1 1341500 648470 693050 2018 1066 2168 4635;4636 3909;3910 3909 1403 2 MGPTELLIEMEDWK DKISQLTRMGPTELLI LIEMEDWKGDKVKAHY R M G W K G 0 0 0 1 0 0 3 1 0 1 2 1 2 0 1 0 1 1 0 0 0 0 14 0 1690.7946 D6REL8;P02675 D6REL8 116 129 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 2 2.0939E-74 172.21 By MS/MS By MS/MS 2 2 19551000 10277000 9273500 + 2019 533 2169;2170 4637;4638;4639;4640 3911;3912;3913;3914 3911 63;64 4 MGQAPSQSLLPPAQDQPRSPVPSAFSDQSR RAPSPSSRMGQAPSQS SAFSDQSRCLIAQTTP R M G S R C 3 2 0 2 0 5 0 1 0 0 2 0 1 1 6 6 0 0 0 1 0 0 30 1 3178.5466 Q9UQ35;I3L3Q8 Q9UQ35 2431 2460 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.00326 44.264 By MS/MS By matching 1 1 14681000 7331300 7349600 2020 2134 2171 4641;4642 3915 3915 309 3073 1 MGTWSTR PAWGGGGRMGTWSTR_ RMGTWSTR________ R M G T R - 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 2 1 0 0 0 0 7 0 837.38032 P15391 P15391 550 556 CD19 B-lymphocyte antigen CD19 yes yes 1 0.020057 40.268 By MS/MS By matching 1 1 13051000 8194500 4856500 2021 1274 2172 4643;4644 3916 3916 3657 1 MIFEGPNKLSPR VARDGPTKMIFEGPNK GPNKLSPRIDGPP___ K M I P R I 0 1 1 0 0 0 1 1 0 1 1 1 1 1 2 1 0 0 0 0 0 0 12 1 1387.7282 E9PKN0;E9PQ01;O94913 E9PKN0 768 779 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 2 0.017103 65.563 By matching By MS/MS 1 1 2053100 907820 1145300 2022 657 2173 4645;4646 3917 3917 891 1 MISTPSPK MDYDLELKMISTPSPK MISTPSPKKSMKMTMY K M I P K K 0 0 0 0 0 0 0 0 0 1 0 1 1 0 2 2 1 0 0 0 0 0 8 0 859.44734 Q53F19 Q53F19 410 417 C17orf85 Uncharacterized protein C17orf85 yes yes 2 0.0066961 98.044 By MS/MS 1 1884100 1884100 0 2023 1596 2174 4647 3918 3918 2215 1 MKKVGTAQTK IDPWKFQRMKKVGTAQ KVGTAQTKIQLLLLGD R M K T K I 1 0 0 0 0 1 0 1 0 0 0 3 1 0 0 0 2 0 0 1 0 0 10 2 1090.6169 Q9BVV2 Q9BVV2 111 120 C20orf195 Uncharacterized protein C20orf195 yes yes 2 0.015743 52.247 By matching By MS/MS 1 1 1207600 747470 460170 2024 1965 2175 4648;4649 3919 3919 3915;3916 1 MKSLEQDALR RALWRAARMKSLEQDA SLEQDALRAQMVLSRS R M K L R A 1 1 0 1 0 1 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 10 1 1189.6125 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1425 1434 SCRIB Protein scribble homolog yes no 2;3 0.00496 90.697 By MS/MS By MS/MS 2 3 22530000 8099800 14431000 2025 245 2176;2177 4650;4651;4652;4653;4654 3920;3921;3922 3920 36 351 3 MLGAPDESSVR ________________ APDESSVRVAVRIRPQ - M L V R V 1 1 0 1 0 0 1 1 0 0 1 0 1 0 1 2 0 0 0 1 0 0 11 0 1160.5496 Q7Z4S6 Q7Z4S6 1 11 KIF21A Kinesin-like protein KIF21A yes yes 2 0.016403 51.286 By matching By MS/MS 1 1 1585200 688430 896800 2026 1714 2178 4655;4656 3923 3923 250 2402;2403 1 MLGEDSDEEEEMDTSER QQILLEKKMLGEDSDE EEMDTSERKINAGSQD K M L E R K 0 1 0 3 0 0 6 1 0 0 1 0 2 0 0 2 1 0 0 0 0 0 17 0 2000.7463 H7C256;A0A087WWF4;A0A087X0M4;Q9BWU0 H7C256 69 85 SLC4A1AP Kanadaptin yes no 2;3 0.0059812 57.595 By MS/MS 2 0 0 0 2027 62 2179 4657;4658 3924;3925 3925 11 82 2 MLLADQGQSWKEEVVTVETWQEGSLK ________________ TWQEGSLKASCLYGQL R M L L K A 1 0 0 1 0 3 4 2 0 0 3 2 1 0 0 2 2 2 0 3 0 0 26 1 2990.4695 A0A087X2E9;A8MX94;P09211 A0A087X2E9 8 33 GSTP1 Glutathione S-transferase P yes no 3 3.0985E-05 67.217 By MS/MS By MS/MS 1 1 7766400 3450500 4315900 2028 116 2180 4659;4660 3926;3927 3927 18 2 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR QRLFENLRMLPHAPGV DEDDPDKRISICSSDK R M L K R I 3 1 0 6 0 2 5 2 1 2 1 1 2 0 5 1 0 0 0 1 0 0 33 1 3630.609 Q13547 Q13547 372 404 HDAC1 Histone deacetylase 1 yes yes 4 3.6037E-09 79.373 By MS/MS By MS/MS 3 4 43646000 18915000 24731000 2029 1508 2181;2182;2183 4661;4662;4663;4664;4665;4666;4667 3928;3929;3930;3931;3932 3931 210;211 2068 5 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR QRLFENLRMLPHAPGV DGEDPDKRISIRASDK R M L K R I 3 1 0 6 0 2 4 3 2 1 1 1 2 0 4 1 0 0 0 2 0 0 33 1 3584.5784 Q92769 Q92769 373 405 HDAC2 Histone deacetylase 2 yes yes 4 6.4477E-09 77.63 By MS/MS By MS/MS 4 4 103000000 56515000 46482000 2030 1861 2184;2185;2186 4668;4669;4670;4671;4672;4673;4674;4675 3933;3934;3935;3936;3937;3938 3936 266;267 2630 6 MLSQDAPTVK SKMEQKFRMLSQDAPT SQDAPTVKESCKTSSN R M L V K E 1 0 0 1 0 1 0 0 0 0 1 1 1 0 1 1 1 0 0 1 0 0 10 0 1088.5536 A0A0C4DG07;O60934 A0A0C4DG07 313 322 NBN Nibrin yes no 2 0.00316 85.355 By MS/MS By MS/MS 1 1 2801200 1324300 1476900 2031 202 2187 4676;4677 3939;3940 3940 292 2 MLWGSDPYPHAEPQQATTPK AISLSEPRMLWGSDPY PQQATTPKATEEPEDV R M L P K A 2 0 0 1 0 2 1 1 1 0 1 1 1 0 4 1 2 1 1 0 0 0 20 0 2253.0525 E7EPN9;Q9Y520 E7EPN9 807 826 PRRC2C Protein PRRC2C yes no 3 0.01447 49.993 By matching By MS/MS 1 1 1819100 1092300 726810 2032 570 2188 4678;4679 3941 3941 68 3408;3409 1 MNDFHISDDEEKNPSK ________________ DEEKNPSKLLFLKTNK - M N S K L 0 0 2 3 0 0 2 0 1 1 0 2 1 1 1 2 0 0 0 0 0 0 16 1 1904.8211 A8MSM7;A0A0C4DG83;A2VCS9;E7ETZ8;Q49MG5 A8MSM7 1 16 MAP9 Microtubule-associated protein 9 yes no 3 0.00069051 77.357 By MS/MS By MS/MS 2 2 8089100 4529200 3559900 2033 206 2189;2190 4680;4681;4682;4683 3942;3943;3944 3942 26 297 3 MNGVMFPGNSPSYTER NNSNSLNRMNGVMFPG NSPSYTERSNINGPGT R M N E R S 0 1 2 0 0 0 1 2 0 0 0 0 2 1 2 2 1 0 1 1 0 0 16 0 1785.7814 Q9NY27 Q9NY27 150 165 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes yes 2 0.00065636 67.299 By MS/MS By MS/MS 2 3 4657100 834990 3822100 2034 2070 2191 4684;4685;4686;4687;4688 3945;3946;3947 3946 304;305 300;301 2958;2959 3 MNNPAIKR FQKKTYSKMNNPAIKR MNNPAIKRIGNHITKS K M N K R I 1 1 2 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 8 1 942.50692 Q5T5N3;P14735 Q5T5N3 28 35 IDE Insulin-degrading enzyme yes no 2 0.015944 52.299 By MS/MS 1 0 0 0 2035 1273 2192 4689 3948 3948 177;178 163 1 MNRNRCQQCR NENCSIMRMNRNRCQQ RNRCQQCRFKKCLSVG R M N C R F 0 3 2 0 2 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 10 2 1421.6187 Q6NSM0;Q14995 Q6NSM0 151 160 NR1D2 Nuclear receptor subfamily 1 group D member 2 yes no 2 0.015412 42.109 By MS/MS 1 0 0 0 2036 1532 2193 4690 3949 3949 217 1 MNSYPYLADR PSSQRKVRMNSYPYLA SYPYLADRHYSREQRY R M N D R H 1 1 1 1 0 0 0 0 0 0 1 0 1 0 1 1 0 0 2 0 0 0 10 0 1228.5547 G3V1T9;J3KPD3;Q9Y580 G3V1T9 82 91 RBM7 RNA-binding protein 7 yes no 2 0.008048 84.352 By MS/MS By matching 2 1 2366800 1021900 1344900 2037 785 2194;2195 4691;4692;4693 3950;3951 3950 95 1043 2 MPCAEDYLSVVLNQLCVLHEK CKHPEAKRMPCAEDYL QLCVLHEKTPVSDRVT R M P E K T 1 0 1 1 2 1 2 0 1 0 4 1 1 0 1 1 0 0 1 3 0 0 21 0 2517.2066 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 470 490 ALB Serum albumin yes no 3 2.0335E-60 142.23 By MS/MS By MS/MS 2 2 45982000 27224000 18758000 + 2038 209 2196;2197 4694;4695;4696;4697 3952;3953;3954;3955;3956 3952 29 5 MPCESSPPESADTPTSTR VAAGKTTKMPCESSPP ADTPTSTRRQPKTPLE K M P T R R 1 1 0 1 1 0 2 0 0 0 0 0 1 0 4 4 3 0 0 0 0 0 18 0 1948.8143 P46013 P46013 1371 1388 MKI67 Antigen KI-67 yes yes 2 1.6655E-29 124.78 By MS/MS By MS/MS 1 1 4855700 2842600 2013100 2039 1361 2198 4698;4699 3957;3958;3959 3957 1789;1790 3 MPEQEYEFPEPR KAKNARVKMPEQEYEF EYEFPEPRNLNNNMRR K M P P R N 0 1 0 0 0 1 4 0 0 0 0 0 1 1 3 0 0 0 1 0 0 0 12 0 1550.6711 Q9H6X2 Q9H6X2 420 431 ANTXR1 Anthrax toxin receptor 1 yes yes 2 0.0072539 57.348 By MS/MS By matching 1 1 1045600 405830 639730 2040 2013 2199 4700;4701 3960 3960 4437 1 MPGLKGFFGGLSQR M P Q R 0 1 0 0 0 1 0 4 0 0 2 1 1 2 1 1 0 0 0 0 0 0 14 1 1493.7813 REV__H7C1E7 yes no 2 0.010088 67.234 By matching By MS/MS 1 2 1487000 615810 871240 + 2041 2200 2200 4702;4703;4704 3961 3961 3186 1 MPIEDSSPEKGREEAASK LVKGSISRMPIEDSSP GREEAASKGHVIYEGK R M P S K G 2 1 0 1 0 0 4 1 0 1 0 2 1 0 2 3 0 0 0 0 0 0 18 2 1959.9208 A0A088AWL3;O75376 A0A088AWL3 1097 1114 NCOR1 Nuclear receptor corepressor 1 yes no 3 0.0066453 60.826 By matching By MS/MS 1 1 6819800 3630900 3188900 2042 119 2201 4705;4706 3962 3962 159 1 MPPLIADSPK GLKPHPERMPPLIADS PLIADSPKARCPLDAL R M P P K A 1 0 0 1 0 0 0 0 0 1 1 1 1 0 3 1 0 0 0 0 0 0 10 0 1067.5685 A0A087WXX9;P54646 A0A087WXX9 370 379 PRKAA2 5-AMP-activated protein kinase catalytic subunit alpha-2 yes no 2 0.007434 68.224 By MS/MS By MS/MS 1 1 1314700 546850 767860 2043 77 2202 4707;4708 3963;3964;3965 3963 95 3 MPPPQPQLKQM M P Q M 0 0 0 0 0 3 0 0 0 0 1 1 2 0 4 0 0 0 0 0 0 0 11 1 1293.6573 REV__Q9BYW2 yes yes 2 0.014062 49.442 By MS/MS By matching 1 1 5910400 2975900 2934600 + 2044 2213 2203 4709;4710 3966 3966 0 MPQDGSDDEDEEWPTLEK RTTRLGPRMPQDGSDD EEWPTLEKAATMTAAG R M P E K A 0 0 0 4 0 1 4 1 0 0 1 1 1 0 2 1 1 1 0 0 0 0 18 0 2119.8528 F8WBL2;Q13895 F8WBL2 93 110 BYSL Bystin yes no 2 4.5197E-29 120.9 By MS/MS By MS/MS 2 2 84908000 36456000 48452000 2045 765 2204;2205 4711;4712;4713;4714 3967;3968;3969;3970 3969 92 1022 4 MQASIEKGGSLPK SVEDIKAKMQASIEKG EKGGSLPKVEAKFINY K M Q P K V 1 0 0 0 0 1 1 2 0 1 1 2 1 0 1 2 0 0 0 0 0 0 13 1 1344.7071 P06748 P06748 251 263 NPM1 Nucleophosmin yes yes 2 5.384E-05 104.7 By matching By MS/MS 1 1 4916200 2257600 2658600 2046 1228 2206 4715;4716 3971 3971 1619 1 MQNNEELPTYEEAK MEKQLSPRMQNNEELP LPTYEEAKVQSQYFRG R M Q A K V 1 0 2 0 0 1 4 0 0 0 1 1 1 0 1 0 1 0 1 0 0 0 14 0 1694.7458 Q4VCS5 Q4VCS5 100 113 AMOT Angiomotin yes yes 2 6.622E-146 196.48 By MS/MS By MS/MS 2 2 33774000 15559000 18215000 2047 1590 2207;2208 4717;4718;4719;4720 3972;3973;3974 3973 228 3782;4367 3 MQNNEELPTYEEAKVQSQYFR MEKQLSPRMQNNEELP KVQSQYFRGQQHASVG R M Q F R G 1 1 2 0 0 3 4 0 0 0 1 1 1 1 1 1 1 0 2 1 0 0 21 1 2603.1962 Q4VCS5 Q4VCS5 100 120 AMOT Angiomotin yes yes 3 0.014247 48.824 By MS/MS 1 2577900 2577900 0 2048 1590 2209 4721 3975 3975 228 3782;4367 1 MQSLSLNK DATLSGKRMQSLSLNK MQSLSLNK________ R M Q N K - 0 0 1 0 0 1 0 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 8 0 919.4797 Q13442 Q13442 174 181 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 2 0.0076013 112.11 By MS/MS By MS/MS 2 2 12910000 6457100 6452800 2049 1503 2210 4722;4723;4724;4725 3976;3977;3978;3979 3977 2058;2059 4 MRDVVLSIVNDLTIAESNCPR VNQDTFGRMRDVVLSI IAESNCPRGARVAVVT R M R P R G 1 2 2 2 1 0 1 0 0 2 2 0 1 0 1 2 1 0 0 3 0 0 21 1 2401.2094 E7ENL6;P12111 E7ENL6 1813 1833 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.0061039 65.416 By MS/MS By matching 1 1 2383000 1146000 1237000 2050 567 2211 4726;4727 3980 3980 67 1 MREDYDSVEQDGDEPGPQR SEEGSRARMREDYDSV GDEPGPQRSVEGWILF R M R Q R S 0 2 0 4 0 2 3 2 0 0 0 0 1 0 2 1 0 0 1 1 0 0 19 1 2221.9182 Q9Y5S9 Q9Y5S9 50 68 RBM8A RNA-binding protein 8A yes yes 3 0.0016484 67.88 By MS/MS By MS/MS 2 2 9680500 5021200 4659300 2051 2171 2212;2213 4728;4729;4730;4731 3981;3982;3983 3983 3154 3 MRTGTQHSPGRSR SAREKISKMRTGTQHS QHSPGRSRPTTVPTTG K M R S R P 0 3 0 0 0 1 0 2 1 0 0 0 1 0 1 2 2 0 0 0 0 0 13 2 1469.727 F5GZM8 F5GZM8 61 73 ATP8B3 yes yes 2 0.017088 49.595 By matching By MS/MS 1 1 2406400 1216000 1190300 2052 706 2214 4732;4733 3984 3984 943;3467;3468 1 MSADMSEIEAR PPTSEGKRMSADMSEI DMSEIEARIAATTGNG R M S A R I 2 1 0 1 0 0 2 0 0 1 0 0 2 0 0 2 0 0 0 0 0 0 11 0 1238.5271 Q9UG54;O43318 Q9UG54 69 79 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 2 0.013758 59.57 By matching By MS/MS 1 1 2208900 1122800 1086100 2053 1120 2215 4734;4735 3985 3985 1491 1 MSDSESEELPK NEEPPKPRMSDSESEE SESEELPKPQVSDSES R M S P K P 0 0 0 1 0 0 3 0 0 0 1 1 1 0 1 3 0 0 0 0 0 0 11 0 1250.5336 Q96ST2;B8ZZB6 Q96ST2 208 218 IWS1 Protein IWS1 homolog yes no 1 0.016963 43.808 By MS/MS 1 72782000 72782000 0 2054 1930 2216 4736 3986 3986 279 2727;2728 0 MSGFIYQGK IMLSASPRMSGFIYQG SGFIYQGKIPIAGTVV R M S G K I 0 0 0 0 0 1 0 2 0 1 0 1 1 1 0 1 0 0 1 0 0 0 9 0 1029.4954 Q15052;E9PDQ5;B1ALK7;Q14155;F6SJA5;E7EUY6 Q15052 487 495 ARHGEF6;ARHGEF7 Rho guanine nucleotide exchange factor 6;Rho guanine nucleotide exchange factor 7 yes no 2 0.021813 78.655 By MS/MS By matching 1 1 7280000 3187400 4092600 2055 1539 2217 4737;4738 3987 3987 218 2123 1 MSQPGSPSPK AEVEENKKMSQPGSPS QPGSPSPKTPTPSTPG K M S P K T 0 0 0 0 0 1 0 1 0 0 0 1 1 0 3 3 0 0 0 0 0 0 10 0 1014.4804 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 1523 1532 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0015449 108.35 By MS/MS By MS/MS 2 3 20094000 7628500 12466000 2056 211 2218;2219 4739;4740;4741;4742;4743 3988;3989;3990;3991 3988 31 306;307 4 MSSGTQMLTISR ________________ TQMLTISRMRSDGFDE - M S S R M 0 1 0 0 0 1 0 1 0 1 1 0 2 0 0 3 2 0 0 0 0 0 12 0 1310.6323 E9PSC8 E9PSC8 1 12 C11orf57 yes yes 2 0.012101 46.158 By MS/MS By matching 1 1 789740 374660 415080 2057 681 2220 4744;4745 3992 3992 378 79 3456 1 MTASYEQASQETR VTFHSSNKMTASYEQA EQASQETRQKKHVTQN K M T T R Q 2 1 0 0 0 2 2 0 0 0 0 0 1 0 0 2 2 0 1 0 0 0 13 0 1500.6515 Q9HCM1 Q9HCM1 1310 1322 KIAA1551 Uncharacterized protein KIAA1551 yes yes 3 0.0001221 44.426 By MS/MS 1 0 0 0 2058 2033 2221 4746 3993 3993 294 4439 1 MTEDHVLPELNKMTQK WLYVAMLRMTEDHVLP ELNKMTQKDITFVAEF R M T Q K D 0 0 1 1 0 1 2 0 1 0 2 2 2 0 1 0 2 0 0 1 0 0 16 1 1912.9387 Q9UJX5 Q9UJX5 428 443 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 3 0.003919 52.527 By MS/MS By MS/MS 1 1 32301000 16963000 15339000 2059 2104 2222 4747;4748 3994;3995 3994 317 303 3956;3957 2 MTGKTQTSNVTNKNDPK ________________ VTNKNDPKSINSRVFI - M T P K S 0 0 3 1 0 1 0 1 0 0 0 3 1 0 1 1 4 0 0 1 0 0 17 2 1862.9156 E5RIX9;E5RG71;B3KT61;Q86SE5 E5RIX9 1 17 RALYL RNA-binding Raly-like protein yes no 3 0.010744 55.011 By MS/MS 1 397670 397670 0 2060 368 2223 4749 3996 3996 60;357 531 0 MTHLLLTATVTPSEQNSSR ________________ PSEQNSSREPGWETAM - M T S R E 1 1 1 0 0 1 1 0 1 0 3 0 1 0 1 3 4 0 0 1 0 0 19 0 2085.0525 J3KRU2;J3QR43;J3QRC6 J3KRU2 1 19 IFT20 yes no 3 0.0094289 52.862 By MS/MS 1 0 0 0 2061 1015 2224 4750 3997 3997 117 1351;1352;3562 1 MTNAKNR LYQAKQDKMTNAKNRT KMTNAKNRTENSERER K M T N R T 1 1 2 0 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 7 1 833.41777 P46940;A0A0J9YXZ5 P46940 270 276 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 0.022022 43 By MS/MS By matching 1 1 667670 328730 338940 2062 1370 2225 4751;4752 3998 3998 191;192 1 MTNPAIQNDFSYYRR TLRFDELKMTNPAIQN NDFSYYRRTLSRMRIT K M T R R T 1 2 2 1 0 1 0 0 0 1 0 0 1 1 1 1 1 0 2 0 0 0 15 1 1874.8734 A0A087X178;Q9NUQ9 A0A087X178 101 115 FAM49B Protein FAM49B yes no 2 0.0064536 48.112 By MS/MS By matching 1 1 2303400 979330 1324100 2063 105 2226 4753;4754 3999 3999 338 15 139 1 MTVLRTLPR GTSPHRYRMTVLRTLP TVLRTLPRLQKLDNQA R M T P R L 0 2 0 0 0 0 0 0 0 0 2 0 1 0 1 0 2 0 0 1 0 0 9 1 1085.6379 O43822 O43822 109 117 C21orf2 Protein C21orf2 yes yes 2 0.020858 50.354 By MS/MS 1 0 0 0 2064 1129 2227 4755 4000 4000 3608;3609 1 MVATTKPKATAK SEEEKTKKMVATTKPK TKPKATAKAALSLPAK K M V A K A 3 0 0 0 0 0 0 0 0 0 0 3 1 0 1 0 3 0 0 1 0 0 12 2 1245.7115 A0A0A0MRM9;Q14978 A0A0A0MRM9 450 461 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.013839 45.115 By MS/MS 1 0 0 0 2065 146 2228 4756 4001 4001 3260;3261;3262 1 MVCSPVTVR ________________ VCSPVTVRIAPPDRRF - M V V R I 0 1 0 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 3 0 0 9 0 1047.5205 A0A087WY75;A0A075B7F8;A8CG34;Q96HA1;A8MY32 A0A087WY75 1 9 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 yes no 2 0.0019498 92.239 By matching By MS/MS 1 2 1327300 632450 694820 2066 17 2229;2230 4757;4758;4759 4002;4003 4002 5 18 2 MVEPENAVTITPLRPEDDYSPR QMRVWRERMVEPENAV PEDDYSPRERRGGGLR R M V P R E 1 2 1 2 0 0 3 0 0 1 1 0 1 0 4 1 2 0 1 2 0 0 22 1 2528.2217 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YDF9 A0A0G2JMS7 735 756 SCRIB Protein scribble homolog yes no 3 0.011884 47.397 By matching By MS/MS 1 1 2219900 1289300 930590 2067 245 2231 4760;4761 4004 4004 37 352 1 MVIQGPSSPQGEAMVTDVLEDQKEGR PVSPASQKMVIQGPSS LEDQKEGRSTNKENPS K M V G R S 1 1 0 2 0 3 3 3 0 1 1 1 2 0 2 2 1 0 0 3 0 0 26 1 2800.3371 Q12888;A6NNK5 Q12888 1107 1132 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.0049767 43.523 By MS/MS By matching 1 1 4438300 2508200 1930100 2068 1481 2232 4762;4763 4005 4005 202;203 2006;2007 1 MVTGNGSLKR KVARKRKRMVTGNGSL TGNGSLKRKSSRKETP R M V K R K 0 1 1 0 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 1 0 0 10 1 1061.5652 A0A087WWJ1;P52701 A0A087WWJ1 302 311 MSH6 DNA mismatch repair protein Msh6 yes no 2 0.015995 51.727 By MS/MS 1 0 0 0 2069 64 2233 4764 4006 4006 10 83 1 MYLGYEYVTAIR VPPRMDAKMYLGYEYV YEYVTAIRNLREGTCP K M Y I R N 1 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 1 0 3 1 0 0 12 0 1477.7275 P02787 P02787 332 343 TF Serotransferrin yes yes 2 0.0030231 90.108 By MS/MS By matching 2 2 9557800 6228100 3329800 2070 1213 2234;2235 4765;4766;4767;4768 4007;4008 4008 144 2 MYPPRSPK PPFLPVGRMYPPRSPK MYPPRSPKSAAPAPIS R M Y P K S 0 1 0 0 0 0 0 0 0 0 0 1 1 0 3 1 0 0 1 0 0 0 8 1 974.50077 H3BUF6;Q8WWM7 H3BUF6 450 457 ATXN2L Ataxin-2-like protein yes no 3 0.00087716 85.533 By MS/MS By MS/MS 1 2 0 0 0 2071 935 2236 4769;4770;4771 4009;4010;4011 4010 1255 3 MYVHRQVRPEAWLSSR LGLLDAGKMYVHRQVR PEAWLSSRPSLGSGQL K M Y S R P 1 3 0 0 0 1 1 0 1 0 1 0 1 0 1 2 0 1 1 2 0 0 16 2 2014.0319 H0Y6Y6;P29017 H0Y6Y6 133 148 CD1C T-cell surface glycoprotein CD1c yes no 2 0.0092253 44.294 By MS/MS 1 444600 0 444600 2072 840 2237 4772 4012 4012 102 1134;1135;4179 1 MYVPMTEDIYNAISAKTLK YFLDDTAKMYVPMTED AISAKTLKL_______ K M Y L K L 2 0 1 1 0 0 1 0 0 2 1 2 2 0 1 1 2 0 2 1 0 0 19 1 2187.0956 G3V1R7;O14975 G3V1R7 366 384 SLC27A2 Very long-chain acyl-CoA synthetase yes no 2 0.012724 52.555 By MS/MS 1 1405000 0 1405000 2073 782 2238 4773 4013 4013 4171 1 NAASFPLRSPQPVCSPAGSEGTPK DGDSSTMRNAASFPLR AGSEGTPKGSRPPLIL R N A P K G 3 1 1 0 1 1 1 2 0 0 1 1 0 1 5 4 1 0 0 1 0 0 24 1 2454.1962 Q6KC79 Q6KC79 266 289 NIPBL Nipped-B-like protein yes yes 3 0.00012244 69.548 By MS/MS By MS/MS 1 1 4613800 2260800 2353100 2074 1670 2239 4774;4775 4014;4015 4014 2335 2 NAEAVLQSPGLSGK VLTVDYTRNAEAVLQS QSPGLSGKVKRDAEKK R N A G K V 2 0 1 0 0 1 1 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1369.7201 Q13045 Q13045 849 862 FLII Protein flightless-1 homolog yes yes 2 9.2355E-15 125.98 By MS/MS By MS/MS 1 1 8601500 4204300 4397300 2075 1488 2240 4776;4777 4016;4017 4016 2029 2 NAEDCLYELPENIR EEQKVKPKNAEDCLYE YELPENIRVSSAKKTE K N A I R V 1 1 2 1 1 0 3 0 0 1 2 0 0 0 1 0 0 0 1 0 0 0 14 0 1734.7883 Q9NZ63 Q9NZ63 141 154 C9orf78 Uncharacterized protein C9orf78 yes yes 2;3 0.00012033 79.659 By MS/MS By MS/MS 2 2 12794000 7155200 5638400 2076 2075 2241 4778;4779;4780;4781 4018;4019;4020 4020 4449 3 NAFACFDEEATGTIQEDYLR TDPEDVIRNAFACFDE TIQEDYLRELLTTMGD R N A L R E 3 1 1 2 1 1 3 1 0 1 1 0 0 2 0 0 2 0 1 0 0 0 20 0 2349.0219 J3QRS3;P19105;O14950 J3QRS3 110 129 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 2;3 1.0772E-43 161.76 By MS/MS By MS/MS 2 2 25043000 14185000 10858000 2077 1028 2242 4782;4783;4784;4785 4021;4022;4023;4024 4021 4 NAHSATTWSGQYVGGAEAR VAWKNNYRNAHSATTW YVGGAEARINTQWLLT R N A A R I 4 1 1 0 0 1 1 3 1 0 0 0 0 0 0 2 2 1 1 1 0 0 19 0 1961.898 CON__Streptavidin CON__Streptavidin 86 104 yes yes 3 0.010861 51.524 By MS/MS By MS/MS 1 1 46249000 24833000 21416000 + 2078 514 2243 4786;4787 4025;4026 4026 2 NALFCLESAWK TVTHPVVRNALFCLES FCLESAWKTAQEGDHG R N A W K T 2 0 1 0 1 0 1 0 0 0 2 1 0 1 0 1 0 1 0 0 0 0 11 0 1337.6438 P01023 P01023 1123 1133 A2M Alpha-2-macroglobulin yes yes 2 0.012024 63.283 By matching By MS/MS 1 1 1221400 500700 720690 2079 1206 2244 4788;4789 4027 4027 1 NALPPVLTTVNGQSPPEHSAPAK PKVNPWTKNALPPVLT PEHSAPAKVVRAAVPK K N A A K V 3 0 2 0 0 1 1 1 1 0 2 1 0 0 5 2 2 0 0 2 0 0 23 0 2324.2125 A0A0B4J210;Q6PKG0;H0YBM7 A0A0B4J210 130 152 LARP1 La-related protein 1 yes no 3 0.00040319 64.83 By MS/MS By MS/MS 2 2 14408000 6861900 7545900 2080 194 2245;2246 4790;4791;4792;4793 4028;4029;4030 4029 31;349 281;3288 3 NASTFEDVTQVSSAYQK VQKDRMDKNASTFEDV QVSSAYQKTVPVEAVT K N A Q K T 2 0 1 1 0 2 1 0 0 0 0 1 0 1 0 3 2 0 1 2 0 0 17 0 1873.8694 Q14247 Q14247 320 336 CTTN Src substrate cortactin yes yes 2;3 6.9361E-10 105.65 By MS/MS By MS/MS 2 2 25623000 10307000 15316000 2081 1519 2247 4794;4795;4796;4797 4031;4032;4033;4034 4031 2085;4353 4 NATDLQNSSMSEEELTK ETLSGLAKNATDLQNS MSEEELTKAMEGLGMD K N A T K A 1 0 2 1 0 1 3 0 0 0 2 1 1 0 0 3 2 0 0 0 0 0 17 0 1895.8419 Q5QNY5;H0YJ60;P40855 Q5QNY5 119 135 PEX19 Peroxisomal biogenesis factor 19 yes no 2 0.0036687 61.212 By MS/MS By matching 1 1 3715300 1427300 2287900 2082 888 2248 4798;4799 4035 4035 1196;1197 1 NATLAWDSSHSSIQNSPK PHIKIEMKNATLAWDS SSIQNSPKLTPKMKKD K N A P K L 2 0 2 1 0 1 0 0 1 1 1 1 0 0 1 5 1 1 0 0 0 0 18 0 1941.9181 O15440 O15440 494 511 ABCC5 Multidrug resistance-associated protein 5 yes yes 3 0.0010848 74.141 By matching By MS/MS 1 1 1995100 950460 1044600 2083 1111 2249 4800;4801 4036 4036 1480 1 NAVALSASPQLK LALANSSRNAVALSAS LSASPQLKEAQSEKEE R N A L K E 3 0 1 0 0 1 0 0 0 0 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1197.6717 Q92547 Q92547 881 892 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 1.0741E-05 110.15 By MS/MS By MS/MS 1 1 6300600 3086500 3214100 2084 1850 2250 4802;4803 4037;4038 4038 2607;2608 2 NCLALGGSTSPTSVIK VIPDLNLRNCLALGGS TSPTSVIKFLLAGSKQ R N C I K F 1 0 1 0 1 0 0 2 0 1 2 1 0 0 1 3 2 0 0 1 0 0 16 0 1603.824 Q8NFU7 Q8NFU7 313 328 TET1 Methylcytosine dioxygenase TET1 yes yes 2 0.0056513 58.885 By matching By MS/MS 1 1 1434600 698240 736410 2085 1805 2251 4804;4805 4039 4039 2545 1 NCPAVTLTSPAK DLPSPDSRNCPAVTLT VTLTSPAKTKILPPRK R N C A K T 2 0 1 0 1 0 0 0 0 0 1 1 0 0 2 1 2 0 0 1 0 0 12 0 1257.6387 Q9UGU0 Q9UGU0 1327 1338 TCF20 Transcription factor 20 yes yes 2 0.0060498 77.74 By MS/MS 1 2341400 2341400 0 2086 2096 2252 4806 4040 4040 3953;3954 1 NCPPSPLPLISK STNRQIQKNCPPSPLP SPLPLISKQSPQTSFP K N C S K Q 0 0 1 0 1 0 0 0 0 1 2 1 0 0 4 2 0 0 0 0 0 0 12 0 1321.7064 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 479 490 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.0016046 80.96 By MS/MS By MS/MS 1 1 4598200 1998400 2599800 2087 149 2253 4807;4808 4041;4042;4043;4044 4041 204 4 NDAPTPGTSTTPGLR KSNTPTPRNDAPTPGT TSTTPGLRSMPGKPPG R N D L R S 1 1 1 1 0 0 0 2 0 0 1 0 0 0 3 1 4 0 0 0 0 0 15 0 1483.7267 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 324 338 TLE3 Transducin-like enhancer protein 3 yes no 2 0.00059205 79.337 By MS/MS By MS/MS 1 1 6469900 3293000 3176900 2088 722 2254 4809;4810 4045;4046;4047 4045 3475 3 NDEELNKLLGK RHLQLAIRNDEELNKL ELNKLLGKVTIAQGGV R N D G K V 0 0 2 1 0 0 2 1 0 0 3 2 0 0 0 0 0 0 0 0 0 0 11 1 1271.6721 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9 A0A0U1RR32 90 100 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A yes no 2 0.017172 66.962 By matching By MS/MS 1 1 1489400 706670 782690 2089 271 2255 4811;4812 4048 4048 1 NDELTSLAEETRALK QLIEFQHRNDELTSLA AEETRALKDEIDVLRA R N D L K D 2 1 1 1 0 0 3 0 0 0 3 1 0 0 0 1 2 0 0 0 0 0 15 1 1688.8581 Q9UJC3 Q9UJC3 289 303 HOOK1 Protein Hook homolog 1 yes yes 2 0.0074087 55.452 By matching By MS/MS 1 1 1493600 700890 792710 2090 2103 2256 4813;4814 4049 4049 316 1 NDFQLIGIQDGYLSLLQDSGEVR MDVPNIKRNDFQLIGI LQDSGEVREDLRLPEG R N D V R E 0 1 1 3 0 3 1 3 0 2 4 0 0 1 0 2 0 0 1 1 0 0 23 0 2579.2867 I3L397;I3L504;P63241 I3L397 87 109 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 2;3 0.00040869 93.495 By matching By MS/MS 2 2 34978000 15950000 19028000 2091 990 2257 4815;4816;4817;4818 4050;4051 4050 2 NDISPPGR QFDASTPKNDISPPGR NDISPPGRFFSSQIPS K N D G R F 0 1 1 1 0 0 0 1 0 1 0 0 0 0 2 1 0 0 0 0 0 0 8 0 854.42463 B5MDQ0;Q2NKX8 B5MDQ0 943 950 ERCC6L DNA excision repair protein ERCC-6-like yes no 2 0.013522 81.771 By matching By MS/MS 1 1 3007500 1314100 1693400 2092 398 2258 4819;4820 4052 4052 555 1 NDKSEEEQSSSSVK SKQAVEMKNDKSEEEQ EQSSSSVKKDETNVKM K N D V K K 0 0 1 1 0 1 3 0 0 0 0 2 0 0 0 5 0 0 0 1 0 0 14 1 1552.6853 G3V5V7;G3V2D6;G3V4W0;B4DY08;B2R5W2;P07910;G3V4C1;G3V2Q1 G3V5V7 114 127 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2 5.8564E-74 170.78 By MS/MS By MS/MS 1 1 25947000 11470000 14477000 2093 364 2259 4821;4822 4053;4054 4053 529 2 NDKSEEEQSSSSVKK SKQAVEMKNDKSEEEQ QSSSSVKKDETNVKME K N D K K D 0 0 1 1 0 1 3 0 0 0 0 3 0 0 0 5 0 0 0 1 0 0 15 2 1680.7802 G3V5V7;G3V2D6;G3V4W0;B4DY08;B2R5W2;P07910;G3V4C1;G3V2Q1 G3V5V7 114 128 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 3 0.0053032 62.69 By matching By MS/MS 1 1 1860900 780400 1080500 2094 364 2260 4823;4824 4055 4055 529 1 NDLAVVDVR GISDVFAKNDLAVVDV DLAVVDVRIGMTRKFG K N D V R I 1 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 9 0 999.53491 P19338 P19338 334 342 NCL Nucleolin yes yes 2 0.010616 83.783 By matching By MS/MS 1 1 998700 471030 527660 2095 1294 2261 4825;4826 4056 4056 1 NDLQDTEISPR EAWEASHKNDLQDTEI QDTEISPRQNRRTRAA K N D P R Q 0 1 1 2 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1286.6103 Q9NS91 Q9NS91 463 473 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 2 5.4386E-44 165.51 By MS/MS By MS/MS 1 1 17318000 7743600 9574000 2096 2051 2262 4827;4828 4057;4058 4058 2927 2 NDQEPPPEALDFSDDEKEKEAK KGSDASWKNDQEPPPE DEKEKEAKQRKKSQIQ K N D A K Q 2 0 1 4 0 1 5 0 0 0 1 3 0 1 3 1 0 0 0 0 0 0 22 2 2530.1347 Q96HR8 Q96HR8 303 324 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes yes 3 0.01694 49.865 By matching By MS/MS 1 1 5515400 2959800 2555600 2097 1897 2263 4829;4830 4059 4059 2678 1 NDSLVTPSPQQAR RQNGQLVRNDSLVTPS TPSPQQARVCPPHMLP R N D A R V 1 1 1 1 0 2 0 0 0 0 1 0 0 0 2 2 1 0 0 1 0 0 13 0 1411.7056 E9PQX8;H7C433;A0A0A0MS29 E9PQX8 15 27 MFF yes no 2 0.0046497 68.847 By matching By MS/MS 1 1 4174400 2092300 2082000 2098 155 2264 4831;4832 4060 4060 210 1 NDSVIVADQTPTPTR TLKFGPARNDSVIVAD DQTPTPTRFLKNCEEV R N D T R F 1 1 1 2 0 1 0 0 0 1 0 0 0 0 2 1 3 0 0 2 0 0 15 0 1612.8057 E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336 E9PEK8 60 74 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes no 2 5.5398E-75 168.68 By MS/MS By MS/MS 2 2 21259000 9774200 11485000 2099 419 2265;2266 4833;4834;4835;4836 4061;4062;4063;4064;4065;4066 4066 3354;3355;3356 6 NDSWGSFDLR RYQRGLERNDSWGSFD SWGSFDLRAAIVYHTK R N D L R A 0 1 1 2 0 0 0 1 0 0 1 0 0 1 0 2 0 1 0 0 0 0 10 0 1195.5258 Q7Z417 Q7Z417 650 659 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0021507 93.345 By matching By MS/MS 1 1 11567000 4828500 6738900 2100 1712 2267 4837;4838 4067 4067 2394 1 NDVSGLLSRTK GNTQTLLRNDVSGLLS SGLLSRTKRNIVPPGW R N D T K R 0 1 1 1 0 0 0 1 0 0 2 1 0 0 0 2 1 0 0 1 0 0 11 1 1188.6463 A0A1B0GVP4 A0A1B0GVP4 763 773 yes yes 2 0.0083983 60.628 By MS/MS 1 445500 445500 0 2101 300 2268 4839 4068 4068 53 428;429;3315 0 NEEDEGHSNSSPR GAKIDASKNEEDEGHS GHSNSSPRHSEAATAQ K N E P R H 0 1 2 1 0 0 3 1 1 0 0 0 0 0 1 3 0 0 0 0 0 0 13 0 1456.5815 D6RAF8;Q14103;D6RD83 D6RAF8 73 85 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.014437 55.899 By matching By MS/MS 1 1 6834100 3494700 3339400 2102 524 2269 4840;4841 4069 4069 708;709;710 1 NEEENIYSVPHDSTQGK MDAVVKPRNEEENIYS PHDSTQGKIITIRNIN R N E G K I 0 0 2 1 0 1 3 1 1 1 0 1 0 0 1 2 1 0 1 1 0 0 17 0 1945.8654 Q9NRY4 Q9NRY4 1099 1115 ARHGAP35 Rho GTPase-activating protein 35 yes yes 2;3 4.659E-14 108.32 By MS/MS By MS/MS 2 2 31695000 16199000 15496000 2103 2049 2270 4842;4843;4844;4845 4070;4071;4072 4071 4443 3 NEEPSEEEIDAPKPK SKTKKVTKNEEPSEEE EIDAPKPKKMKKEKEM K N E P K K 1 0 1 1 0 0 5 0 0 1 0 2 0 0 3 1 0 0 0 0 0 0 15 1 1710.7948 Q9NR30 Q9NR30 117 131 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 5.4666E-61 161.2 By MS/MS By MS/MS 2 2 85881000 34750000 51131000 2104 2045 2271 4846;4847;4848;4849 4073;4074;4075;4076;4077 4076 2923 5 NEEPVRSPERR FRQRISTKNEEPVRSP PVRSPERRDRKASANA K N E R R D 0 3 1 0 0 0 3 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 11 2 1367.6906 Q92922 Q92922 304 314 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3 0.012279 64.224 By MS/MS By MS/MS 1 1 48247000 23710000 24537000 2105 1868 2272 4850;4851 4078;4079 4078 2638 2 NENRATASSCNSPFPQR RKPPKGKRNENRATAS CNSPFPQRPRKRLTEQ R N E Q R P 2 2 3 0 1 1 1 0 0 0 0 0 0 1 2 3 1 0 0 0 0 0 17 1 1934.8653 A0A0A0MTQ1;Q96GE4 A0A0A0MTQ1 277 293 CEP95 Centrosomal protein of 95 kDa yes no 3 0.014807 50.305 By MS/MS 1 839730 0 839730 2106 184 2273 4852 4080 4080 0 NESLTATDGLR NLSCALRRNESLTATD LTATDGLRGVRRNSSF R N E L R G 1 1 1 1 0 0 1 1 0 0 2 0 0 0 0 1 2 0 0 0 0 0 11 0 1175.5782 H0Y507;Q5TCZ1 H0Y507 927 937 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 9.1006E-05 112.02 By matching By MS/MS 1 1 1801200 831790 969420 2107 829 2274 4853;4854 4081 4081 1116 1 NEVISQQLCVIFTHCYGPYPIPK FEILKASKNEVISQQL YGPYPIPKLTEIKRKQ K N E P K L 0 0 1 0 2 2 1 1 1 3 1 1 0 1 3 1 1 0 2 2 0 0 23 0 2762.356 A6QL63 A6QL63 878 900 BTBD11 Ankyrin repeat and BTB/POZ domain-containing protein BTBD11 yes yes 3 0.0073495 41.615 By matching By MS/MS 1 1 5490600 2178600 3312000 2108 335 2275 4855;4856 4082 4082 56;354;355 4067;4068 1 NFDFEGSLSPVIAPK TDRLAWTRNFDFEGSL LSPVIAPKKARPSETG R N F P K K 1 0 1 1 0 0 1 1 0 1 1 1 0 2 2 2 0 0 0 1 0 0 15 0 1619.8195 H0Y564;Q9H1A4 H0Y564 215 229 ANAPC1 Anaphase-promoting complex subunit 1 yes no 2 0.00011538 88.108 By MS/MS By MS/MS 1 1 11966000 5263500 6702200 2109 832 2276 4857;4858 4083;4084 4084 1121 2 NFIGNSNHGSQSPR DAYFTEIRNFIGNSNH NHGSQSPRNVEERMNG R N F P R N 0 1 3 0 0 1 0 2 1 1 0 0 0 1 1 3 0 0 0 0 0 0 14 0 1513.7022 E7EUL6;A0A0C3SFZ7;E7EQ57;Q03112 E7EUL6 840 853 MECOM MDS1 and EVI1 complex locus protein EVI1 yes no 2 0.019479 63.185 By matching By MS/MS 1 1 5119000 2674200 2444800 2110 196 2277 4859;4860 4085 4085 285 0 NFSDNQLQEGK KKSKENPRNFSDNQLQ DNQLQEGKNVIGLQMG R N F G K N 0 0 2 1 0 2 1 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1278.584 P37802;X6RJP6 P37802 161 171 TAGLN2 Transgelin-2 yes no 2 0.0057303 70.728 By MS/MS By MS/MS 1 1 2702100 1049700 1652400 2111 1344 2278 4861;4862 4086;4087 4087 1768 2 NFTKPQDGDVIAPLITPQKK FVQWCADRNFTKPQDG PLITPQKKEWNDSTSV R N F K K E 1 0 1 2 0 2 0 1 0 2 1 3 0 1 3 0 2 0 0 1 0 0 20 2 2209.2107 Q9Y3Z3 Q9Y3Z3 577 596 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 4 0.011462 42.106 By MS/MS By matching 1 1 2184100 1013100 1171000 2112 2157 2279 4863;4864 4088 4088 3978 1 NFYESDDDQKEK DELEDNGKNFYESDDD SDDDQKEKTDKKKKPY K N F E K T 0 0 1 3 0 1 2 0 0 0 0 2 0 1 0 1 0 0 1 0 0 0 12 1 1516.6318 O00203 O00203 272 283 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.020576 59.116 By MS/MS By matching 1 1 3767400 1801100 1966400 2113 1079 2280 4865;4866 4089 4089 1420 0 NGDVSQFPYVEFTGR EVHNEDGRNGDVSQFP PYVEFTGRDSVTCPTC R N G G R D 0 1 1 1 0 1 1 2 0 0 0 0 0 2 1 1 1 0 1 2 0 0 15 0 1714.7951 F2Z3N7;C9JZ87;Q9NUM4 F2Z3N7 42 56 TMEM106B Transmembrane protein 106B yes no 2 0.013386 47.288 By MS/MS By matching 1 1 2821500 1315900 1505700 2114 493 2281 4867;4868 4090 4090 4119 1 NGFIDTSVRLLDK IPQAVYCKNGFIDTSV TSVRLLDKIERNTLTR K N G D K I 0 1 1 2 0 0 0 1 0 1 2 1 0 1 0 1 1 0 0 1 0 0 13 1 1476.7936 Q9BYS8 Q9BYS8 66 78 LRRC2 Leucine-rich repeat-containing protein 2 yes yes 3 0.021544 41.242 By MS/MS 1 0 0 0 2115 1979 2282 4869 4091 4091 2813;3919 1 NGFLPSLSTEKIK PLMMFPEKNGFLPSLS SLSTEKIKAEFESFPG K N G I K A 0 0 1 0 0 0 1 1 0 1 2 2 0 1 1 2 1 0 0 0 0 0 13 1 1432.7926 A4UGR9 A4UGR9 2148 2160 XIRP2 Xin actin-binding repeat-containing protein 2 yes yes 2 0.00047999 75.652 By matching By MS/MS 1 1 9782700 5979300 3803500 2116 324 2283 4870;4871 4092 4092 54 464 1 NGILASPQSAPGNLDNSK SDPHLLERNGILASPQ PGNLDNSKSGEIKGNG R N G S K S 2 0 3 1 0 1 0 2 0 1 2 1 0 0 2 3 0 0 0 0 0 0 18 0 1781.8908 C9JRP1 C9JRP1 250 267 SLC4A7 Anion exchange protein yes yes 2 0.00066554 91.518 By matching By MS/MS 1 1 9025500 4623200 4402200 2117 476 2284 4872;4873 4093 4093 664 1 NGSEADIDEGLYSR VPTNGMAKNGSEADID IDEGLYSRQLYVLGHE K N G S R Q 1 1 1 2 0 0 2 2 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1524.6692 Q5JRS1;Q5JRS3;Q5JRS2;Q5JRR9;Q5JRS0;P22314 Q5JRS1 58 71 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 3.2202E-37 149.23 By MS/MS By MS/MS 4 4 31997000 13430000 18566000 2118 1304 2285;2286 4874;4875;4876;4877;4878;4879;4880;4881 4094;4095;4096;4097;4098;4099 4095 185 1714;1715;4276 6 NGSLTNHFSFEK QINGSVLKNGSLTNHF TNHFSFEKKKARVAVL K N G E K K 0 0 2 0 0 0 1 1 1 0 1 1 0 2 0 2 1 0 0 0 0 0 12 0 1379.647 A0A140TA71;P22102 A0A140TA71 58 69 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 2 0.017198 55.98 By MS/MS By matching 1 1 3967200 2140400 1826700 2119 284 2287 4882;4883 4100 4100 401 1 NGSTAVAESVASPQK KPATGERKNGSTAVAE ESVASPQKTMSVLSCI K N G Q K T 3 0 1 0 0 1 1 1 0 0 0 1 0 0 1 3 1 0 0 2 0 0 15 0 1444.7158 Q12888;A6NNK5;C9JXV0 Q12888 1017 1031 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.011011 63.727 By MS/MS By MS/MS 1 1 2863000 1289000 1574000 2120 1481 2288 4884;4885 4101;4102 4102 208 2008;2009 2 NGTKSPEAATPVGK ILSPLFPRNGTKSPEA EAATPVGKVMPFRHQP R N G G K V 2 0 1 0 0 0 1 2 0 0 0 2 0 0 2 1 2 0 0 1 0 0 14 1 1355.7045 Q5VWN6 Q5VWN6 681 694 FAM208B Protein FAM208B yes yes 2 0.013903 62.69 By MS/MS By matching 1 1 913700 496970 416720 2121 1653 2289 4886;4887 4103 4103 2312 1 NGVAAEVSPAKEENPR DYFGPPAKNGVAAEVS PAKEENPRRASKAVEE K N G P R R 3 1 2 0 0 0 3 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 16 1 1666.8275 Q9BW71 Q9BW71 118 133 HIRIP3 HIRA-interacting protein 3 yes yes 2;3 0.00054443 78.848 By MS/MS By MS/MS 2 2 18889000 9892000 8997400 2122 1967 2290;2291 4888;4889;4890;4891 4104;4105 4104 284 2787 2 NGVIQHTGAAAEEFNDDTD DDDVQRERNGVIQHTG EEFNDDTD________ R N G T D - 3 0 2 3 0 1 2 2 1 1 0 0 0 1 0 0 2 0 0 1 0 0 19 0 2002.8504 Q8WU17 Q8WU17 646 664 RNF139 E3 ubiquitin-protein ligase RNF139 yes yes 2 0.0054933 59.502 By matching By MS/MS 1 1 2952500 1428200 1524300 2123 1830 2292 4892;4893 4106 4106 257 3866 1 NHLSPQQGGATPQVPSPCCR RRGLAHPKNHLSPQQG QVPSPCCRFDSPRGPP K N H C R F 1 1 1 0 2 3 0 2 1 0 1 0 0 0 4 2 1 0 0 1 0 0 20 0 2190.0059 A0A087X0R7;Q9H4L4 A0A087X0R7 96 115 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 0.0017496 78.088 By MS/MS By MS/MS 1 1 5462000 2634400 2827600 2124 101 2293 4894;4895 4107;4108 4108 135 2 NHSGSRTPPVALNSSR SATPPATRNHSGSRTP PVALNSSRMSCFSRPS R N H S R M 1 2 2 0 0 0 0 1 1 0 1 0 0 0 2 4 1 0 0 1 0 0 16 1 1678.8499 Q9UQ35 Q9UQ35 2098 2113 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.019243 44.047 By matching By MS/MS 1 1 7811300 3416000 4395300 2125 2134 2294 4896;4897 4109 4109 3074;3075;3965 1 NIELICQENEGENDPVLQR DFYFGKLRNIELICQE ENDPVLQRIVDILYAT R N I Q R I 0 1 3 1 1 2 4 1 0 2 2 0 0 0 1 0 0 0 0 1 0 0 19 0 2269.0645 Q15691 Q15691 223 241 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 3 6.6105E-05 71.073 By MS/MS By MS/MS 1 1 2683700 1223800 1459900 2126 1565 2295 4898;4899 4110;4111 4110 2 NIGNGIISSPLTGK VIPDHSKKNIGNGIIS ISSPLTGKRQDSGTMK K N I G K R 0 0 2 0 0 0 0 3 0 3 1 1 0 0 1 2 1 0 0 0 0 0 14 0 1369.7565 A0A075B784;Q9P275;K7EMM6;E9PEW0 A0A075B784 456 469 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.0080689 59.607 By matching By MS/MS 1 1 737180 380090 357090 2127 14 2296 4900;4901 4112 4112 14 1 NIGRDTPTSAGPNSFNK PEAKMRMKNIGRDTPT AGPNSFNKGKHGFSDN K N I N K G 1 1 3 1 0 0 0 2 0 1 0 1 0 1 2 2 2 0 0 0 0 0 17 1 1774.8598 Q8WW12 Q8WW12 134 150 PCNP PEST proteolytic signal-containing nuclear protein yes yes 3 0.013194 61.186 By matching By MS/MS 1 1 8748900 5027700 3721300 2128 1838 2297 4902;4903 4113 4113 3868 1 NIIHGSDSVESAEK DFCIQVGRNIIHGSDS DSVESAEKEIGLWFHP R N I E K E 1 0 1 1 0 0 2 1 1 2 0 1 0 0 0 3 0 0 0 1 0 0 14 0 1484.7107 P15531 P15531 115 128 NME1 Nucleoside diphosphate kinase A yes yes 3 0.0014373 72.209 By MS/MS By matching 1 1 3352300 1509500 1842900 2129 1275 2298 4904;4905 4114 4114 1 NIILEEGKEILVGDVGQTVDDPYATFVK FCLSEDKKNIILEEGK DPYATFVKMLPDKDCR K N I V K M 1 0 1 3 0 1 3 3 0 3 2 2 0 1 1 0 2 0 1 4 0 0 28 1 3061.5859 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 46 73 CFL1 Cofilin-1 yes no 3 1.6036E-06 64.779 By MS/MS By matching 1 1 9102800 4643100 4459700 2130 675 2299 4906;4907 4115 4115 1 NILSQIVDIDGIWEGTR VEMPGCKKNILSQIVD DGIWEGTRDFAACNHL K N I T R D 0 1 1 2 0 1 1 2 0 4 1 0 0 0 0 1 1 1 0 1 0 0 17 0 1928.0003 P16233 P16233 257 273 PNLIP Pancreatic triacylglycerol lipase yes yes 2;3 3.188E-119 200.76 By MS/MS By MS/MS 2 2 52477000 27829000 24648000 2131 1276 2300 4908;4909;4910;4911 4116;4117;4118;4119 4116 4 NILSSADYVER EMINRIEKNILSSADY SSADYVERGQEHVKTA K N I E R G 1 1 1 1 0 0 1 0 0 1 1 0 0 0 0 2 0 0 1 1 0 0 11 0 1265.6252 Q12846 Q12846 244 254 STX4 Syntaxin-4 yes yes 2 0.010901 54.608 By MS/MS 1 617220 0 617220 2132 1479 2301 4912 4120 4120 4338 1 NINMDNDLEVLTSSPTR STEEVDMKNINMDNDL VLTSSPTRNLNGAYLT K N I T R N 0 1 3 2 0 0 1 0 0 1 2 0 1 0 1 2 2 0 0 1 0 0 17 0 1917.9102 Q9Y5T5 Q9Y5T5 539 555 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 2 0.017118 49.049 By matching By MS/MS 1 1 2850500 1270900 1579500 2133 2172 2302 4913;4914 4121 4121 3155 1 NINTFVETPVQK KPAVSDEKNINTFVET FVETPVQKLDLLGNLP K N I Q K L 0 0 2 0 0 1 1 0 0 1 0 1 0 1 1 0 2 0 0 2 0 0 12 0 1388.73 P46013 P46013 2399 2410 MKI67 Antigen KI-67 yes yes 2 0.010347 72.705 By matching By MS/MS 1 1 1601300 639930 961420 2134 1361 2303 4915;4916 4122 4122 3689 1 NIPTVNENLENYYLEVNQLEK DLSYNKLKNIPTVNEN LEVNQLEKFDIKSFCK K N I E K F 0 0 5 0 0 1 4 0 0 1 3 1 0 0 1 0 1 0 2 2 0 0 21 0 2535.2493 P51884 P51884 268 288 LUM Lumican yes yes 2;3 2.635E-25 115.04 By MS/MS By MS/MS 2 1 72298000 48803000 23495000 2135 1397 2304 4917;4918;4919 4123;4124;4125;4126 4125 4 NISHVFTSLFTTMK VSLQKVDKNISHVFTS TSLFTTMKTEELNRYR K N I M K T 0 0 1 0 0 0 0 0 1 1 1 1 1 2 0 2 3 0 0 1 0 0 14 0 1624.8283 G3V186;Q9ULK0 G3V186 200 213 GRID1 Glutamate receptor ionotropic, delta-1 yes no 3 0.014718 40.113 By MS/MS By matching 1 1 883740 440790 442950 2136 779 2305 4920;4921 4127 4127 116 94 3490;3491 1 NIYVLQELDNPGAK DKNSVNFKNIYVLQEL ELDNPGAKRILELDQF K N I A K R 1 0 2 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 14 0 1572.8148 B1AHC9;P12956 B1AHC9 51 64 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.0070257 63.32 By MS/MS By matching 1 1 664350 354890 309460 2137 354 2306 4922;4923 4128 4128 1 NKDSGSDTASAIIPSTTPSVDSDDESVVK LKDKIKGKNKDSGSDT SDDESVVKDKKKKSKI K N K V K D 2 0 1 5 0 0 1 1 0 2 0 2 0 0 2 7 3 0 0 3 0 0 29 1 2921.3625 E7EX40;Q6WKZ4 E7EX40 33 61 RAB11FIP1 Rab11 family-interacting protein 1 yes no 3 0.0045989 43.579 By MS/MS By matching 1 1 4069200 2247200 1822000 2138 603 2307 4924;4925 4129 4129 830;831 1 NKENVYTPK RTPANKLKNKENVYTP KENVYTPKSAVKNEEY K N K P K S 0 0 2 0 0 0 1 0 0 0 0 2 0 0 1 0 1 0 1 1 0 0 9 1 1091.5611 Q14680 Q14680 422 430 MELK Maternal embryonic leucine zipper kinase yes yes 2 1.4187E-05 89.561 By MS/MS 2 0 0 0 2139 1525 2308 4926;4927 4130;4131 4130 3760 2 NKPGPNIESGNEDDDASFK KGQKKNQKNKPGPNIE EDDDASFKIKTVAQKK K N K F K I 1 0 3 3 0 0 2 2 0 1 0 2 0 1 2 2 0 0 0 0 0 0 19 1 2032.8974 A0A087WUT6;O60841 A0A087WUT6 206 224 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0024357 64.962 By matching By MS/MS 1 1 190560000 84268000 106290000 2140 43 2309 4928;4929 4132 4132 54 1 NKPGPNIESGNEDDDASFKIK KGQKKNQKNKPGPNIE DDASFKIKTVAQKKAE K N K I K T 1 0 3 3 0 0 2 2 0 2 0 3 0 1 2 2 0 0 0 0 0 0 21 2 2274.0764 A0A087WUT6;O60841 A0A087WUT6 206 226 EIF5B Eukaryotic translation initiation factor 5B yes no 3 2.1729E-06 96.561 By MS/MS By MS/MS 1 1 84505000 47815000 36690000 2141 43 2310 4930;4931 4133;4134 4133 54 2 NKPGVYTK WGYGCAQKNKPGVYTK NKPGVYTKVCNYVNWI K N K T K V 0 0 1 0 0 0 0 1 0 0 0 2 0 0 1 0 1 0 1 1 0 0 8 1 905.49707 CON__P00761;E9PRA0;J3KQC6;Q9BYE2;A6XGL3;CON__P07477;E7EQ64;P07477 CON__P00761 209 216 TMPRSS13;PRSS1 Transmembrane protease serine 13;Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2 no no 2 0.020027 93.429 By matching By MS/MS 1 1 16740000 6108900 10631000 + 2142 499;336 2311 4932;4933 4135 4135 1 NKPRSPVVELSK VQRVPKMKNKPRSPVV SPVVELSKVPLVQRGS K N K S K V 0 1 1 0 0 0 1 0 0 0 1 2 0 0 2 2 0 0 0 2 0 0 12 2 1352.7776 P25098 P25098 666 677 ADRBK1 Beta-adrenergic receptor kinase 1 yes yes 3 0.0091137 66.568 By MS/MS By MS/MS 1 1 3370100 1507500 1862700 2143 1311 2312 4934;4935 4136;4137;4138 4138 1728 3 NKSFEMSSFVETK SFEISKKRNKSFEMSS MSSFVETKGLEQLTKS R N K T K G 0 0 1 0 0 0 2 0 0 0 0 2 1 2 0 3 1 0 0 1 0 0 13 1 1532.7181 H0YCJ2;A0A0D9SF51;A0A0D9SG17;A0A1B0GWB6;A0A087WW73;A0A087WT80;Q9NQ66 H0YCJ2 303 315 PLCB1 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes no 2 0.021513 44.639 By MS/MS 1 458550 0 458550 2144 24 2313 4936 4139 4139 5 24;3213 0 NKSNESVDIQDQEEK KKRSGKWKNKSNESVD DIQDQEEKVVKQECIK K N K E K V 0 0 2 2 0 2 3 0 0 1 0 2 0 0 0 2 0 0 0 1 0 0 15 1 1761.8017 Q5UIP0 Q5UIP0 1574 1588 RIF1 Telomere-associated protein RIF1 yes yes 2 0.0068597 66.738 By MS/MS By matching 1 1 5587400 3245300 2342100 2145 1641 2314 4937;4938 4140 4140 2284 1 NKSVSQYLEMDKTLSK YMTEMQQKNKSVSQYL EMDKTLSKKEEEVERL K N K S K K 0 0 1 1 0 1 1 0 0 0 2 3 1 0 0 3 1 0 1 1 0 0 16 2 1869.9506 D6RCC6;E7EUJ7;Q8TC20 D6RCC6 444 459 CAGE1 Cancer-associated gene 1 protein yes no 3 0.0057558 56.793 By MS/MS 1 0 0 0 2146 530 2315 4939 4141 4141 81;370 62 714;3393 1 NKTSTTSSMVASAEQPR RPIKGILKNKTSTTSS VASAEQPRGNVDEELS K N K P R G 2 1 1 0 0 1 1 0 0 0 0 1 1 0 1 4 3 0 0 1 0 0 17 1 1793.8578 E7EMN6;G1AUC5;Q6NXS1;P41236;E7EUI7 E7EMN6 17 33 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 yes no 3 0.010255 48.729 By MS/MS By matching 1 1 2396200 1115900 1280300 2147 560 2316 4940;4941 4142 4142 742 1 NLALDEAGQRSTM SEVAARKRNLALDEAG EAGQRSTM________ R N L T M - 2 1 1 1 0 1 1 1 0 0 2 0 1 0 0 1 1 0 0 0 0 0 13 1 1404.6667 Q53TN4 Q53TN4 274 286 CYBRD1 Cytochrome b reductase 1 yes yes 2 0.00035097 82.102 By MS/MS By matching 1 1 2220100 1301700 918420 2148 1602 2317 4942;4943 4143 4143 230 2221 1 NLALSRESLVV SRERRLKKNLALSRES LSRESLVV________ K N L V V - 1 1 1 0 0 0 1 0 0 0 3 0 0 0 0 2 0 0 0 2 0 0 11 1 1199.6874 S4R3V8;Q86X29 S4R3V8 591 601 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.010239 76.655 By MS/MS By matching 1 1 4982200 2061600 2920600 2149 1738 2318 4944;4945 4144 4144 2445;2446 1 NLASPNCVKPK PVVRPKIRNLASPNCV SPNCVKPKIFFDTDDD R N L P K I 1 0 2 0 1 0 0 0 0 0 1 2 0 0 2 1 0 0 0 1 0 0 11 1 1226.6441 Q8NG27 Q8NG27 262 272 PJA1 E3 ubiquitin-protein ligase Praja-1 yes yes 2 0.0014761 104.41 By MS/MS By MS/MS 1 1 9391900 4537000 4854900 2150 1806 2319 4946;4947 4145;4146 4145 2546 2 NLEATYGTVR TASQQSRKNLEATYGT EATYGTVRTGNRTLFE K N L V R T 1 1 1 0 0 0 1 1 0 0 1 0 0 0 0 0 2 0 1 1 0 0 10 0 1122.5669 E7ESJ3;Q9UPS8 E7ESJ3 340 349 ANKRD26 Ankyrin repeat domain-containing protein 26 yes no 2 0.0057998 91.318 By matching By MS/MS 1 1 2084900 1186600 898270 2151 585 2320 4948;4949 4147 4147 3419 1 NLEQILNGGESPK PNGSVETKNLEQILNG LNGGESPKQKGQEIKR K N L P K Q 0 0 2 0 0 1 2 2 0 1 2 1 0 0 1 1 0 0 0 0 0 0 13 0 1397.7151 G3V340;Q13033;G3V3G7 G3V340 219 231 STRN3 Striatin-3 yes no 2 0.0010032 74.678 By MS/MS By MS/MS 1 1 1741200 843060 898110 2152 789 2321 4950;4951 4148;4149 4148 1048 1 NLEQILNGGESPKQK PNGSVETKNLEQILNG GGESPKQKGQEIKRSS K N L Q K G 0 0 2 0 0 2 2 2 0 1 2 2 0 0 1 1 0 0 0 0 0 0 15 1 1653.8686 G3V340;Q13033 G3V340 219 233 STRN3 Striatin-3 yes no 2 1.0133E-05 96.489 By MS/MS By MS/MS 3 3 8291500 3972900 4318600 2153 789 2322;2323 4952;4953;4954;4955;4956;4957 4150;4151;4152;4153 4151 119 1048 4 NLEWIAGGTWTPSALK SSFKEAVKNLEWIAGG TWTPSALKFAYDRLIK K N L L K F 2 0 1 0 0 0 1 2 0 1 2 1 0 0 1 1 2 2 0 0 0 0 16 0 1742.8992 P12110 P12110 693 708 COL6A2 Collagen alpha-2(VI) chain yes yes 2 6.5781E-37 141.34 By MS/MS By MS/MS 1 1 18367000 9572700 8794000 2154 1263 2324 4958;4959 4154;4155 4154 2 NLGSFLALQR VVGTVLYRNLGSFLAL GSFLALQRNTTVLNSK R N L Q R N 1 1 1 0 0 1 0 1 0 0 3 0 0 1 0 1 0 0 0 0 0 0 10 0 1117.6244 E5RG74;O14514 E5RG74 834 843 ADGRB1;BAI1 Brain-specific angiogenesis inhibitor 1 yes no 2 0.020578 42.395 By MS/MS 1 0 0 0 2155 548 2325 4960 4156 4156 84 730 1 NLGSGSPKPR EEVPAFFKNLGSGSPK GSGSPKPRQKFCGMFC K N L P R Q 0 1 1 0 0 0 0 2 0 0 1 1 0 0 2 2 0 0 0 0 0 0 10 1 1011.5461 A0A1C7CYX9 A0A1C7CYX9 22 31 yes yes 2 0.013338 80.871 By matching By MS/MS 1 1 7941500 4077900 3863600 2156 306 2326 4961;4962 4157 4157 437 1 NLGSINTELQDVQR YIDSRARRNLGSINTE TELQDVQRIMVANIEE R N L Q R I 0 1 2 1 0 2 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1585.806 A0A087X1A9;O75396 A0A087X1A9 9 22 SEC22B Vesicle-trafficking protein SEC22b yes no 2 0.00023071 84.759 By MS/MS By MS/MS 1 1 5784800 2827100 2957700 2157 107 2327 4963;4964 4158;4159 4158 140 2 NLHALILVNNK DGDFKNLKNLHALILV ALILVNNKISK_____ K N L N K I 1 0 3 0 0 0 0 0 1 1 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1247.735 F8VX58;F8VXZ8;F8VUF6;F8VWU0;P07585 F8VX58 106 116 DCN Decorin yes no 2 0.003306 85.862 By MS/MS By matching 1 1 1292900 700230 592660 2158 741 2328 4965;4966 4160 4160 1 NLLEDDSDEEEDFFLR GSVKSERRNLLEDDSD EEEDFFLRGPSGPRFG R N L L R G 0 1 1 4 0 0 4 0 0 0 3 0 0 2 0 1 0 0 0 0 0 0 16 0 1984.8538 O75379 O75379 24 39 VAMP4 Vesicle-associated membrane protein 4 yes yes 2 4.1757E-13 108.25 By matching By MS/MS 1 1 12859000 6362300 6496600 2159 1159 2329 4967;4968 4161 4161 1545 1 NLQEAEEWYK QYESVAAKNLQEAEEW QEAEEWYKSKFADLSE K N L Y K S 1 0 1 0 0 1 3 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 10 0 1308.5986 P08670;B0YJC4;B0YJC5;Q5JVS8;H7C5W5;P41219;F8W835 P08670 283 292 VIM;PRPH Vimentin;Peripherin yes no 2 0.017085 61.56 By MS/MS By matching 1 1 1297900 639160 658760 2160 1243 2330 4969;4970 4162 4162 1 NLQSPTQFQTPR QNYQRIERNLQSPTQF PTQFQTPRSSAIRRSG R N L P R S 0 1 1 0 0 3 0 0 0 0 1 0 0 1 2 1 2 0 0 0 0 0 12 0 1415.7157 O75385 O75385 447 458 ULK1 Serine/threonine-protein kinase ULK1 yes yes 2 0.015741 56.951 By matching By MS/MS 1 1 2338600 1227500 1111100 2161 1161 2331 4971;4972 4163 4163 1547 1 NLQTVNVDEN YVPVTTFKNLQTVNVD QTVNVDEN________ K N L E N - 0 0 3 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1144.536 P62899 P62899 116 125 RPL31 60S ribosomal protein L31 yes yes 2 0.0077155 78.334 By MS/MS By MS/MS 1 1 7303200 3222300 4080800 2162 1434 2332 4973;4974 4164;4165 4165 2 NLSFNELYPSGTLK QDSGEEARNLSFNELY LYPSGTLKLQYNFDTI R N L L K L 0 0 2 0 0 0 1 1 0 0 3 1 0 1 1 2 1 0 1 0 0 0 14 0 1581.8039 Q8WYP5 Q8WYP5 1539 1552 AHCTF1 Protein ELYS yes yes 2 6.5045E-13 118.13 By MS/MS 1 1141100 0 1141100 2163 1845 2333 4975 4166 4166 2598 1 NLSPGAVESDVR DISGLRKKNLSPGAVE GAVESDVRGITGVDLF K N L V R G 1 1 1 1 0 0 1 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 12 0 1242.6204 P53621 P53621 171 182 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.00060063 98.943 By MS/MS 1 1865900 0 1865900 2164 1405 2334 4976 4167 4167 1897 1 NLSPSFSR LRLMGGFKNLSPSFSR NLSPSFSRPASTIARP K N L S R P 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 3 0 0 0 0 0 0 8 0 906.45593 H3BNU8;Q1ED39 H3BNU8 64 71 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.017899 77.533 By MS/MS By MS/MS 1 1 4510200 2008000 2502200 2165 912 2335 4977;4978 4168;4169 4168 1220 2 NLSSDEATNPISR GEREISLKNLSSDEAT EATNPISRVLNGNQQV K N L S R V 1 1 2 1 0 0 1 0 0 1 1 0 0 0 1 3 1 0 0 0 0 0 13 0 1402.6688 Q7Z417 Q7Z417 110 122 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0068881 63.694 By matching By MS/MS 1 1 4999500 2479100 2520400 2166 1712 2336 4979;4980 4170 4170 2395 1 NLSYTCRSNR FFKRSIRRNLSYTCRS SYTCRSNRDCQIDQHH R N L N R D 0 2 2 0 1 0 0 0 0 0 1 0 0 0 0 2 1 0 1 0 0 0 10 1 1269.5884 P10588 P10588 87 96 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes yes 2 0.020456 63.408 By MS/MS By matching 1 1 2499500 1440100 1059400 2167 1251 2337 4981;4982 4171 4171 1649;1650 0 NLTMSPLHK ETGMALLRNLTMSPLH LTMSPLHKRRQRRGRL R N L H K R 0 0 1 0 0 0 0 0 1 0 2 1 1 0 1 1 1 0 0 0 0 0 9 0 1039.5485 O14686 O14686 1602 1610 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.01977 62.107 By MS/MS 1 1402200 0 1402200 2168 1095 2338 4983 4172 4172 1458 1 NLVSPAYCTQESR SDFITENRNLVSPAYC AYCTQESREEIPGGEA R N L S R E 1 1 1 0 1 1 1 0 0 0 1 0 0 0 1 2 1 0 1 1 0 0 13 0 1523.7038 Q9NUQ3 Q9NUQ3 94 106 TXLNG Gamma-taxilin yes yes 2 0.0055966 66.797 By MS/MS By matching 1 1 3704800 1994500 1710200 2169 2056 2339 4984;4985 4173 4173 2939;2940;3942 1 NLVSPAYCTQESREEIPGGEAR SDFITENRNLVSPAYC EIPGGEARTDPPDGQQ R N L A R T 2 2 1 0 1 1 4 2 0 1 1 0 0 0 2 2 1 0 1 1 0 0 22 1 2462.1496 Q9NUQ3 Q9NUQ3 94 115 TXLNG Gamma-taxilin yes yes 3 0.01184 60.564 By MS/MS By MS/MS 1 1 46268000 21221000 25048000 2170 2056 2340 4986;4987 4174;4175 4174 2939;2940;3942 2 NLVWNAGALHYSDEVEIIQGLTR DRYYRCDRNLVWNAGA EIIQGLTRMPGGRDAL R N L T R M 2 1 2 1 0 1 2 2 1 2 3 0 0 0 0 1 1 1 1 2 0 0 23 0 2597.3238 A0A087X0S5;P12109 A0A087X0S5 83 105 COL6A1 Collagen alpha-1(VI) chain yes no 3 6.9764E-33 120.52 By MS/MS By MS/MS 1 1 91423000 42648000 48775000 2171 102 2341 4988;4989 4176;4177 4176 2 NLVYDQSPNR ESKLASCRNLVYDQSP VYDQSPNRTGGPASGR R N L N R T 0 1 2 1 0 1 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 10 0 1204.5836 I3L2T8;I3L533;I3L2R9;Q9NXR1 I3L2T8 69 78 NDE1 Nuclear distribution protein nudE homolog 1 yes no 2 0.008236 67.214 By MS/MS By matching 1 1 1725100 793450 931650 2172 989 2342 4990;4991 4178 4178 1326 1 NLYAHIQK GHTEVPARNLYAHIQK NLYAHIQKLGQVPPGE R N L Q K L 1 0 1 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 985.53451 H0Y380;H0Y4H1;H0Y7Z9;H0Y6Z7;P10586 H0Y380 691 698 PTPRF Receptor-type tyrosine-protein phosphatase F yes no 2 0.0036252 124.59 By MS/MS By MS/MS 1 1 13834000 6040800 7793000 2173 817 2343 4992;4993 4179;4180 4179 4174 2 NLYSGDYYR IADFGMSRNLYSGDYY LYSGDYYRIQGRAVLP R N L Y R I 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 3 0 0 0 9 0 1149.5091 Q16832 Q16832 734 742 DDR2 Discoidin domain-containing receptor 2 yes yes 2 0.0016753 88.177 By MS/MS By MS/MS 1 1 2610300 1203800 1406600 2174 1576 2344 4994;4995 4181;4182 4182 4363;4364 2 NNEGGIMNKIKK QKMVHDIKNNEGGIMN GIMNKIKKLKVKAPPS K N N K K L 0 0 3 0 0 0 1 2 0 2 0 3 1 0 0 0 0 0 0 0 0 0 12 2 1344.7184 K7EKR2;Q2MD47;Q2MD59;Q8WV28 K7EKR2 27 38 BLNK;BASH B-cell linker protein yes no 2 0.013256 47.187 By MS/MS By matching 1 1 883360 424630 458740 2175 1041 2345 4996;4997 4183 4183 141;142 1 NNHHEENISSKMK ________________ ENISSKMKGLNGKVSD - N N M K G 0 0 3 0 0 0 2 0 2 1 0 2 1 0 0 2 0 0 0 0 0 0 13 1 1566.7209 A0A1B0GV13;A0A0D9SF54;A0A0D9SGF6;Q13813 A0A1B0GV13 1 13 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 2 0.014836 40.113 By MS/MS 1 478940 478940 0 2176 230 2346 4998 4184 4184 34;35;36 334;335 1 NNSFTAPSTVGK TLQNHYYRNNSFTAPS TAPSTVGKRNLSPSQE R N N G K R 1 0 2 0 0 0 0 1 0 0 0 1 0 1 1 2 2 0 0 1 0 0 12 0 1221.599 O95453 O95453 555 566 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.0018384 79.466 By MS/MS By MS/MS 1 1 12296000 5311300 6984300 2177 1194 2347 4999;5000 4185;4186 4185 1595 2 NNSVSGLSVK GDHMASSRNNSVSGLS SVSGLSVKSKNNTKQK R N N V K S 0 0 2 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 0 2 0 0 10 0 1003.5298 E9PJ60;Q9UHI6 E9PJ60 106 115 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.0093268 65.842 By matching By MS/MS 1 1 3913300 1876400 2036800 2178 646 2348 5001;5002 4187 4187 874 1 NNYALNTTATYAEPYRPIQYR RSTLTYQRNNYALNTT PYRPIQYRVQECNYNR R N N Y R V 3 2 3 0 0 1 1 0 0 1 1 0 0 0 2 0 3 0 4 0 0 0 21 1 2518.2241 A0A0D9SF60;Q99569 Q99569 467 487 PKP4 Plakophilin-4 no no 3 0.0023244 54.974 By MS/MS 1 1972000 0 1972000 2179 232;1939 2349 5003 4188;4189 4189 3298;3299;3300;4039 2 NPDDITQEEYGEFYK KTKPIWTRNPDDITQE EEYGEFYKSLTNDWED R N P Y K S 0 0 1 2 0 1 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1846.7897 P08238 P08238 292 306 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 4.3696E-05 93.839 By matching By MS/MS 1 1 3872000 1210500 2661500 2180 1237 2350 5004;5005 4190 4190 1 NPEDKSPQLSLSPRPASPK LAGSPTPKNPEDKSPQ SPRPASPKAQWPQSED K N P P K A 1 1 1 1 0 1 1 0 0 0 2 2 0 0 5 4 0 0 0 0 0 0 19 2 2047.0698 B9EGQ5;M0QXA7;O95785 B9EGQ5 182 200 WIZ Protein Wiz yes no 3 0.0098228 60.334 By MS/MS By matching 1 1 17053000 9538900 7514500 2181 423 2351 5006;5007 4191 4191 593;594;595 1 NPLPPILGSPTK KLPDFLQRNPLPPILG PILGSPTKAVPSFDFP R N P T K A 0 0 1 0 0 0 0 1 0 1 2 1 0 0 4 1 1 0 0 0 0 0 12 0 1232.7129 O75385 O75385 615 626 ULK1 Serine/threonine-protein kinase ULK1 yes yes 2 0.0085926 73.985 By MS/MS 1 1478800 0 1478800 2182 1161 2352 5008 4192 4192 3620 1 NPQMPQYSSPQPGSALSPR QDRGYMQRNPQMPQYS PGSALSPRQPSGGQIH R N P P R Q 1 1 1 0 0 3 0 1 0 0 1 0 1 0 5 4 0 0 1 0 0 0 19 0 2040.9687 O14497;A0A087WUV6;H0Y488;A0A1B0GTU5 O14497 756 774 ARID1A AT-rich interactive domain-containing protein 1A yes no 3 0.0040541 50.255 By matching By MS/MS 1 1 2365100 1248600 1116500 2183 1091 2353 5009;5010 4193 4193 127 1435;1436 1 NPSDSAVHSPFTK SLVQYDLKNPSDSAVH AVHSPFTKRQAFTPSS K N P T K R 1 0 1 1 0 0 0 0 1 0 0 1 0 1 2 3 1 0 0 1 0 0 13 0 1385.6575 F8W726;Q14157 F8W726 419 431 UBAP2L Ubiquitin-associated protein 2-like yes no 2 2.7085E-09 116 By MS/MS By MS/MS 1 1 6748300 2561600 4186700 2184 754 2354 5011;5012 4194;4195 4195 999;1000;1001 2 NPSDSAVHSPFTKR SLVQYDLKNPSDSAVH VHSPFTKRQAFTPSST K N P K R Q 1 1 1 1 0 0 0 0 1 0 0 1 0 1 2 3 1 0 0 1 0 0 14 1 1541.7587 F8W726;Q14157 F8W726 419 432 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.012152 45.79 By MS/MS By matching 1 1 15804000 7016800 8786700 2185 754 2355 5013;5014 4196 4196 999;1000;1001 1 NPVTPRFIR CAPPGGGRNPVTPRFI PVTPRFIRHFSMLCLP R N P I R H 0 2 1 0 0 0 0 0 0 1 0 0 0 1 2 0 1 0 0 1 0 0 9 1 1098.6298 A0A0C4DGR9;Q9C0G6 A0A0C4DGR9 241 249 DNAH6 Dynein heavy chain 6, axonemal yes no 2 0.019453 45.718 By MS/MS 1 0 0 0 2186 217 2356 5015 4197 4197 33 3293 1 NQATSATSEKDNDDDQSDKGTYTIELENPNSEEVEAR QEMDKMLKNQATSATS NSEEVEARKMIDKVFG K N Q A R K 3 1 4 5 0 2 6 1 0 1 1 2 0 0 1 4 4 0 1 1 0 0 37 2 4099.785 H0Y2V6;Q5SW79;H0YB66 H0Y2V6 445 481 CEP170 Centrosomal protein of 170 kDa yes no 4 5.0795E-08 59.496 By MS/MS By matching 1 1 10645000 5729900 4915300 2187 815 2357 5016;5017 4198 4198 1091;3504 1 NQDLRISIQK N Q Q K 0 1 1 1 0 2 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 10 1 1213.6779 REV__B8ZZJ5 yes no 2 0.0037775 76.332 By matching By MS/MS 1 1 4472000 589180 3882800 + 2188 2191 2358 5018;5019 4199 4199 331;467 3179 1 NQEVKNALKR NPLIYSLRNQEVKNAL EVKNALKRIIEKLCLA R N Q K R I 1 1 2 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 0 1 0 0 10 2 1198.6782 P0C617 P0C617 309 318 OR5AL1 Olfactory receptor 5AL1 yes yes 2 0.017595 44.377 By MS/MS 1 0 0 0 2189 1246 2359 5020 4200 4200 169 1 NQGGYGGSSSSSSYGSGR GQYFAKPRNQGGYGGS SSSYGSGRRF______ R N Q G R R 0 1 1 0 0 1 0 6 0 0 0 0 0 0 0 7 0 0 2 0 0 0 18 0 1693.6928 F8W6I7;P09651;H0YH80 F8W6I7 288 305 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 2 0.0038672 63.46 By matching By MS/MS 1 1 2074300 1072300 1002000 2190 752 2360 5021;5022 4201 4201 995 1 NQIPRTPENLITEIR GSNPFLTRNQIPRTPE ENLITEIRSSWRKAIE R N Q I R S 0 2 2 0 0 1 2 0 0 3 1 0 0 0 2 0 2 0 0 0 0 0 15 1 1792.9795 Q5SYF9;Q5VY60;Q7Z4H7 Q5SYF9 95 109 HAUS6 HAUS augmin-like complex subunit 6 yes no 3 0.0010688 77.192 By MS/MS 1 1546900 0 1546900 2191 1620 2361 5023 4202 4202 3791 1 NQKPSQVNGAPGSPTEPAGQK KSPKLQKKNQKPSQVN PTEPAGQKQHQKALPK K N Q Q K Q 2 0 2 0 0 3 1 3 0 0 0 2 0 0 4 2 1 0 0 1 0 0 21 1 2091.0345 Q9BQG0;I3L1L3 Q9BQG0 1255 1275 MYBBP1A Myb-binding protein 1A yes no 3 2.3817E-17 108.47 By MS/MS By MS/MS 3 3 81119000 46638000 34481000 2192 1952 2362;2363 5024;5025;5026;5027;5028;5029 4203;4204;4205;4206;4207;4208;4209 4205 281;445 2767;3911 7 NQKPSQVNGAPGSPTEPAGQKQHQK KSPKLQKKNQKPSQVN AGQKQHQKALPKKGVL K N Q Q K A 2 0 2 0 0 5 1 3 1 0 0 3 0 0 4 2 1 0 0 1 0 0 25 2 2612.3055 Q9BQG0;I3L1L3 Q9BQG0 1255 1279 MYBBP1A Myb-binding protein 1A yes no 4 4.6912E-05 71.148 By MS/MS By MS/MS 1 2 3551500 1525300 2026200 2193 1952 2364 5030;5031;5032 4210;4211 4211 281;445 2767;3911 2 NQKQPGVDSLSPVASLPK SQSASFPRNQKQPGVD SPVASLPKQIFQPSVQ R N Q P K Q 1 0 1 1 0 2 0 1 0 0 2 2 0 0 3 3 0 0 0 2 0 0 18 1 1864.0054 A0A087X151;Q9UBW7 A0A087X151 208 225 ZMYM2 Zinc finger MYM-type protein 2 yes no 2;3 0.0030216 59.57 By MS/MS By matching 2 2 4023800 2116900 1906900 2194 104 2365 5033;5034;5035;5036 4212;4213 4212 137;138 2 NQNYLVPSPVLR DGIKARNRNQNYLVPS LVPSPVLRILDHTAFS R N Q L R I 0 1 2 0 0 1 0 0 0 0 2 0 0 0 2 1 0 0 1 2 0 0 12 0 1398.7619 C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6 C9J3R1 81 92 ZNF639 Zinc finger protein 639 yes no 2 0.012331 59.227 By MS/MS By MS/MS 1 1 1054300 576350 477950 2195 429 2366 5037;5038 4214;4215 4215 611 2 NQQMCCVSTSIVSFVR PKGKNYYKNQQMCCVS TSIVSFVRVGNGLSAS K N Q V R V 0 1 1 0 2 2 0 0 0 1 0 0 1 1 0 3 1 0 0 3 0 0 16 0 1914.875 Q7Z2Y8 Q7Z2Y8 1039 1054 GVINP1 Interferon-induced very large GTPase 1 yes yes 2 0.013492 40.727 By MS/MS 1 464250 464250 0 2196 1709 2367 5039 4216 4216 234 249 2390 1 NQSLGQSAPSLTAGLK ASNLVRMRNQSLGQSA PSLTAGLKELSLPRRG R N Q L K E 2 0 1 0 0 2 0 2 0 0 3 1 0 0 1 3 1 0 0 0 0 0 16 0 1570.8315 Q6P0Q8 Q6P0Q8 142 157 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 2 0.0041033 61.097 By matching By MS/MS 1 1 1522500 757560 764970 2197 1675 2368 5040;5041 4217 4217 2344 1 NQSPVLEPVGR ATYSALNRNQSPVLEP PVLEPVGRSTLAQRRG R N Q G R S 0 1 1 0 0 1 1 1 0 0 1 0 0 0 2 1 0 0 0 2 0 0 11 0 1194.6357 P51812 P51812 713 723 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 2 0.0053484 71.976 By MS/MS By MS/MS 1 1 6258600 2947100 3311500 2198 1395 2369 5042;5043 4218;4219 4218 1883 2 NQVSLTCLVK PSREEMTKNQVSLTCL VSLTCLVKGFYPSDIS K N Q V K G 0 0 1 0 1 1 0 0 0 0 2 1 0 0 0 1 1 0 0 2 0 0 10 0 1160.6223 P01859;A0A0A0MS07;P01861;A0A0A0MS08;P01857;P01860 P01861 240 249 IGHG2;IGHG1;IGHG4;IGHG3 Ig gamma-2 chain C region;Ig gamma-4 chain C region;Ig gamma-1 chain C region;Ig gamma-3 chain C region no no 2 0.014675 63.534 By MS/MS 1 1069800 1069800 0 2199 1208;1209 2370 5044 4220 4220 1 NREEEWDPEYTPK SNNDFQKRNREEEWDP WDPEYTPKSKKYYLHD R N R P K S 0 1 1 1 0 0 4 0 0 0 0 1 0 0 2 0 1 1 1 0 0 0 13 1 1691.7427 Q9Y2W1 Q9Y2W1 864 876 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.021414 68.972 By MS/MS 1 2010800 0 2010800 2200 2146 2371 5045 4221 4221 3974 1 NRIKNGLDQLQK VLPLTSDKNRIKNGLD NGLDQLQKIVPDGHTF K N R Q K I 0 1 2 1 0 2 0 1 0 1 2 2 0 0 0 0 0 0 0 0 0 0 12 2 1425.8052 A0A087WW08;A0A087WXZ5;A0A087WVT0;A6NF34 A0A087WW08 37 48 ANTXRL Anthrax toxin receptor-like yes no 1 0.011061 47.823 By matching By MS/MS 1 1 137590000 65015000 72577000 2201 55 2372 5046;5047 4222 4222 334 1 NRLSSLNSEVSTLRNTR LVTLWILKNRLSSLNS VSTLRNTRMLAFKATA K N R T R M 0 3 3 0 0 0 1 0 0 0 3 0 0 0 0 4 2 0 0 1 0 0 17 2 1946.0293 M0R0K5;Q9UHX3 M0R0K5 701 717 ADGRE2;EMR2 EGF-like module-containing mucin-like hormone receptor-like 2 yes no 3 0.01684 42.52 By MS/MS 1 0 0 0 2202 1070 2373 5048 4223 4223 144;145;146 3588 1 NRSAEEGELAESK LKAKLRPRNRSAEEGE EGELAESKSSQKESAV R N R S K S 2 1 1 0 0 0 4 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 13 1 1418.6638 Q9C0C2 Q9C0C2 1664 1676 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 7.0685E-95 179.66 By MS/MS By MS/MS 1 1 8635600 4295500 4340100 2203 1985 2374 5049;5050 4224;4225 4225 2827 2 NRTPCAPAMQVSF PCTSPARRNRTPCAPA APAMQVSF________ R N R S F - 2 1 1 0 1 1 0 0 0 0 0 0 1 1 2 1 1 0 0 1 0 0 13 1 1477.6806 F5GWJ4 F5GWJ4 110 122 TNFRSF1A yes yes 2 0.015913 50.207 By MS/MS 1 1420800 1420800 0 2204 697 2375 5051 4226 4226 106 934 1 NSANNTTTSGLTPNSMIPEKERQNIAER KWKPQAQRNSANNTTT ERQNIAERLLRVMCAD R N S E R L 2 2 5 0 0 1 3 1 0 2 1 1 1 0 2 3 4 0 0 0 0 0 28 2 3072.4894 Q5T7W0 Q5T7W0 445 472 ZNF618 Zinc finger protein 618 yes yes 3 0.0048566 40.986 By MS/MS By matching 1 1 379490000 2028800 377460000 2205 1631 2376 5052;5053 4227 4227 221 2274;3797;3798;3799 1 NSATCHSEDSDLEID VLVLTSVRNSATCHSE EDSDLEID________ R N S I D - 1 0 1 3 1 0 2 0 1 1 1 0 0 0 0 3 1 0 0 0 0 0 15 0 1691.6581 Q13371 Q13371 287 301 PDCL Phosducin-like protein yes yes 2 0.0022527 66.673 By MS/MS 1 0 0 0 2206 1501 2377 5054 4228 4228 2056;2057 1 NSATFKSFEDR SRKLGDMRNSATFKSF TFKSFEDRVGTIKSKV R N S D R V 1 1 1 1 0 0 1 0 0 0 0 1 0 2 0 2 1 0 0 0 0 0 11 1 1300.6048 O43399 O43399 160 170 TPD52L2 Tumor protein D54 yes yes 2 1.9886E-85 183.96 By MS/MS By MS/MS 1 1 46820000 20596000 26223000 2207 1123 2378 5055;5056 4229;4230 4229 1494 2 NSDDAPWSPK KSRPKKKKNSDDAPWS DDAPWSPKARVTPTLP K N S P K A 1 0 1 2 0 0 0 0 0 0 0 1 0 0 2 2 0 1 0 0 0 0 10 0 1115.4884 H0Y3N9;Q9UPP1;H0Y589 H0Y3N9 741 750 PHF8 Histone lysine demethylase PHF8 yes no 2 2.4582E-13 141.73 By MS/MS By MS/MS 1 1 5794400 2865100 2929300 2208 819 2379 5057;5058 4231;4232;4233 4231 1102 3 NSEGKQLDPNEMR EVLSRIFKNSEGKQLD QLDPNEMRTVKRVVSG K N S M R T 0 1 2 1 0 1 2 1 0 0 1 1 1 0 1 1 0 0 0 0 0 0 13 1 1516.694 Q9NZJ4 Q9NZJ4 3863 3875 SACS Sacsin yes yes 2 0.015756 48.112 By MS/MS 1 0 0 0 2209 2078 2380 5059 4234 4234 308;309 2986 1 NSESESNKVAAETQSPSLFGSTK QQHGNSGRNSESESNK PSLFGSTKLQQESTFL R N S T K L 2 0 2 0 0 1 3 1 0 0 1 2 0 1 1 6 2 0 0 1 0 0 23 1 2397.1296 Q9UKX7 Q9UKX7 207 229 NUP50 Nuclear pore complex protein Nup50 yes yes 3 0.0043679 53.381 By MS/MS By matching 1 1 64077000 31362000 32715000 2210 2114 2381 5060;5061 4235 4235 3026;3027 1 NSITLTNLTPGTEYVVSIVALNGR EDRVPHSRNSITLTNL SIVALNGREESPLLIG R N S G R E 1 1 3 0 0 0 1 2 0 2 3 0 0 0 1 2 4 0 1 3 0 0 24 0 2531.3595 P02751;H0Y7Z1 P02751 1411 1434 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 0.00097701 77.543 By MS/MS By MS/MS 1 1 21294000 12273000 9020500 2211 1212 2382 5062;5063 4236;4237 4236 162 2 NSKYNSLTINNDITLLK LKIAKVFKNSKYNSLT NNDITLLKLSTAASFS K N S L K L 0 0 4 1 0 0 0 0 0 2 3 2 0 0 0 2 2 0 1 0 0 0 17 1 1950.0422 CON__P00766 CON__P00766 91 107 yes yes 3 0.0095791 47.639 By MS/MS By matching 1 1 2785000 1384200 1400900 + 2212 500 2383 5064;5065 4238 4238 70;71 688;3380;4126 1 NSLESISSIDR FAAGIGHRNSLESISS ESISSIDRELSPEGPG R N S D R E 0 1 1 1 0 0 1 0 0 2 1 0 0 0 0 4 0 0 0 0 0 0 11 0 1219.6044 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1138 1148 SCRIB Protein scribble homolog yes no 2 0.010734 61.375 By MS/MS By MS/MS 1 1 3206400 1683200 1523300 2213 245 2384 5066;5067 4239;4240 4240 353 2 NSLLAGGDDDTMSVISGISSR WLPLMSYRNSLLAGGD VISGISSRGSTVRSKK R N S S R G 1 1 1 3 0 0 0 3 0 2 2 0 1 0 0 5 1 0 0 1 0 0 21 0 2093.9899 Q8N3U4 Q8N3U4 1046 1066 STAG2 Cohesin subunit SA-2 yes yes 2 0.012368 58.577 By MS/MS 1 806330 806330 0 2214 1776 2385 5068 4241 4241 258 2496 1 NSLRVEGDNIYVR LQLIEGKKNSLRVEGD EGDNIYVRHSNLMLEE K N S V R H 0 2 2 1 0 0 1 1 0 1 1 0 0 0 0 1 0 0 1 2 0 0 13 1 1533.79 O43491;H0Y5B0;E9PMV8;E9PPC9;Q6ZSX4 O43491 613 625 EPB41L2 Band 4.1-like protein 2 yes no 3 7.7384E-30 149.82 By MS/MS By MS/MS 1 1 18622000 8918600 9703900 2215 1125 2386 5069;5070 4242;4243 4243 1497;4240 2 NSLTIEKTYISLANQR DMNIRLDKNSLTIEKT YISLANQRTITIHNRS K N S Q R T 1 1 2 0 0 1 1 0 0 2 2 1 0 0 0 2 2 0 1 0 0 0 16 1 1849.9898 H0YF91;J3QL79;F8WD03;Q4G0P3 H0YF91 141 156 HYDIN Hydrocephalus-inducing protein homolog yes no 3 0.012105 43.791 By MS/MS 1 501840 501840 0 2216 767 2387 5071 4244 4244 386 3486;4168 1 NSNFSVQHPSSTSPTEK KSRFGKKRNSNFSVQH SSTSPTEKCQDGIMKK R N S E K C 0 0 2 0 0 1 1 0 1 0 0 1 0 1 2 5 2 0 0 1 0 0 17 0 1845.8493 Q03468 Q03468 1336 1352 ERCC6 DNA excision repair protein ERCC-6 yes yes 3 0.0019633 60.968 By MS/MS By matching 1 1 1514100 751510 762560 2217 1461 2388 5072;5073 4245 4245 1961;1962;3732 1 NSNSPPSPSSMNQR QVHSTTRRNSNSPPSP SPSSMNQRRLGPREVG R N S Q R R 0 1 3 0 0 1 0 0 0 0 0 0 1 0 3 5 0 0 0 0 0 0 14 0 1501.658 Q7Z5L9 Q7Z5L9 454 467 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 0.012624 56.872 By MS/MS By MS/MS 2 2 5896300 3965900 1930400 2218 1718 2389;2390 5074;5075;5076;5077 4246;4247 4246 2416;2417;2418 2 NSPEDLGLSLTGDSCK KTSEIEPKNSPEDLGL SLTGDSCKLMLSTSEY K N S C K L 0 0 1 2 1 0 1 2 0 0 3 1 0 0 1 3 1 0 0 0 0 0 16 0 1691.7672 Q12888;A6NNK5;C9JXV0 Q12888 499 514 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 5.9045E-30 137.73 By MS/MS 1 7195800 0 7195800 2219 1481 2391 5078 4248 4248 2010 1 NSPGSQVASNPR TPHALGSRNSPGSQVA SQVASNPRQAAYEMRM R N S P R Q 1 1 2 0 0 1 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 12 0 1212.5847 Q9H0D6 Q9H0D6 447 458 XRN2 5-3 exoribonuclease 2 yes yes 2 0.0008508 97.273 By MS/MS By MS/MS 2 1 8264400 5167000 3097400 2220 1989 2392 5079;5080;5081 4249;4250;4251 4251 2842 3 NSQEDSEDSEDKDVK KNKRRSGKNSQEDSED DSEDKDVKTKKDDSHS K N S V K T 0 0 1 4 0 1 3 0 0 0 0 2 0 0 0 3 0 0 0 1 0 0 15 1 1723.702 Q9H1E3 Q9H1E3 53 67 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 2.058E-169 202.01 By MS/MS By MS/MS 6 4 48212000 32816000 15396000 2221 1992 2393;2394 5082;5083;5084;5085;5086;5087;5088;5089;5090;5091 4252;4253;4254;4255;4256;4257;4258;4259;4260;4261;4262 4255 2849;2850 11 NSQNPNSK FQLQIRSKNSQNPNSK NSQNPNSKIVLLDVPV K N S S K I 0 0 3 0 0 1 0 0 0 0 0 1 0 0 1 2 0 0 0 0 0 0 8 0 887.40971 P08514 P08514 758 765 ITGA2B Integrin alpha-IIb;Integrin alpha-IIb heavy chain;Integrin alpha-IIb light chain, form 1;Integrin alpha-IIb light chain, form 2 yes yes 2 0.016117 43.124 By MS/MS 1 0 0 0 2222 1238 2395 5092 4263 4263 167;168 1634;1635 1 NSQPHSPTSSLTSGGSLPLLQSPPSTR ISLPLSARNSQPHSPT LQSPPSTRLSPARHPL R N S T R L 0 1 1 0 0 2 0 2 1 0 4 0 0 0 5 8 3 0 0 0 0 0 27 0 2732.3729 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 304 330 AMOT Angiomotin yes no 3 3.6885E-09 92.499 By MS/MS By MS/MS 2 2 43208000 23583000 19625000 2223 1590 2396;2397 5093;5094;5095;5096 4264;4265;4266;4267 4264 2204;2205;2206;3783 4 NSSEASSGDFLDLK ESSGLQRRNSSEASSG SGDFLDLKGEGDIHEN R N S L K G 1 0 1 2 0 0 1 1 0 0 2 1 0 1 0 4 0 0 0 0 0 0 14 0 1468.6682 J3KSH8;J3KT51;Q9UK76 J3KSH8 40 53 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 2 0.0029087 69.92 By matching By MS/MS 1 1 1906000 946230 959790 2224 1018 2398 5097;5098 4268 4268 1355;1356 1 NSSLGSPSNLCGSPPGSIR DLSALLCRNSSLGSPS GSPPGSIRKPPNLEGI R N S I R K 0 1 2 0 1 0 0 3 0 1 2 0 0 0 3 6 0 0 0 0 0 0 19 0 1885.8952 Q9C0B0 Q9C0B0 373 391 UNK RING finger protein unkempt homolog yes yes 2 0.022271 46.877 By MS/MS By matching 1 1 5191500 2808400 2383200 2225 1984 2399 5099;5100 4269 4269 2823 1 NSSNTSVGSPSNTIGR KLLHNHLKNSSNTSVG SPSNTIGRTPSRHTSS K N S G R T 0 1 3 0 0 0 0 2 0 1 0 0 0 0 1 5 2 0 0 1 0 0 16 0 1576.7441 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 859 874 CLASP1 CLIP-associating protein 1 yes no 2 0.00033666 93.495 By matching By MS/MS 1 1 7158100 3707600 3450600 2226 759 2400 5101;5102 4270 4270 3484 1 NSSPGEASLLEK VTEETDHRNSSPGEAS GEASLLEKETTRFFFF R N S E K E 1 0 1 0 0 0 2 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 12 0 1230.6092 Q76FK4 Q76FK4 1097 1108 NOL8 Nucleolar protein 8 yes yes 2 0.0081851 62.287 By MS/MS By matching 1 1 2302800 1242500 1060300 2227 1701 2401 5103;5104 4271 4271 2375 1 NSSQSGGKPGSSPITK SSGSSQSKNSSQSGGK PGSSPITKHGLSSGSS K N S T K H 0 0 1 0 0 1 0 3 0 1 0 2 0 0 2 5 1 0 0 0 0 0 16 1 1530.7638 Q15648 Q15648 1145 1160 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.013549 59.225 By MS/MS By matching 1 1 3690200 2191300 1498900 2228 1562 2402 5105;5106 4272 4272 2155;2156 1 NSSTETDQQPHSPDSSSSVHSIR KSTPEDHRNSSTETDQ SSSVHSIRNMQVPQES R N S I R N 0 1 1 2 0 2 1 0 2 1 0 0 0 0 2 8 2 0 0 1 0 0 23 0 2482.0957 Q92613 Q92613 555 577 JADE3 Protein Jade-3 yes yes 3 0.0031605 54.875 By matching By MS/MS 1 1 5896800 2996400 2900400 2229 1851 2403 5107;5108 4273 4273 2609 1 NSSTPGLQVPVSPTVPIQNQK GNNQDLTRNSSTPGLQ TVPIQNQKYVPNSTDS R N S Q K Y 0 0 2 0 0 3 0 1 0 1 1 1 0 0 4 3 2 0 0 3 0 0 21 0 2190.1644 Q03164 Q03164 3025 3045 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 0.0030132 58.123 By MS/MS By MS/MS 1 1 9513600 4346300 5167400 2230 1459 2404 5109;5110 4274;4275 4275 1955;3730 2 NSSTSTSSSGSR DAQRTGRKNSSTSTSS STSSSGSRRNAFQGVV K N S S R R 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 7 2 0 0 0 0 0 12 0 1156.4956 A0A0A0MQW8;Q8N6U8 A0A0A0MQW8 258 269 GPR161 G-protein coupled receptor 161 yes no 2 0.015089 47.622 By MS/MS 1 0 0 0 2231 128 2405 5111 4276 4276 20 173;174;175;3249;3250 1 NSTVEYTLNKLEPGGK RSYKVKSRNSTVEYTL NKLEPGGKYHIIVQLG R N S G K Y 0 0 2 0 0 0 2 2 0 0 2 2 0 0 1 1 2 0 1 1 0 0 16 1 1748.8945 E9PKB0;E9PS32;E9PP43;E9PPB3;Q92673 E9PKB0 601 616 SORL1 Sortilin-related receptor yes no 2 0.021053 44.543 By MS/MS By matching 1 1 3791600 1867400 1924200 2232 652 2406 5112;5113 4277 4277 98 886;3447 0 NSYNNSQAPSPGLGSK KTLTEHLKNSYNNSQA PSPGLGSKAVGMPSPV K N S S K A 1 0 3 0 0 1 0 2 0 0 1 1 0 0 2 4 0 0 1 0 0 0 16 0 1619.754 Q9UHB7 Q9UHB7 1034 1049 AFF4 AF4/FMR2 family member 4 yes yes 2 0.00087074 82.121 By MS/MS By matching 1 1 7343800 3716200 3627600 2233 2098 2407 5114;5115 4278 4278 3004 1 NTDYTELHQQNTDLIYQTGPK NASNIYSKNTDYTELH LIYQTGPKSTYISSAA K N T P K S 0 0 2 2 0 3 1 1 1 1 2 1 0 0 1 0 4 0 2 0 0 0 21 0 2478.1663 Q8TBA6 Q8TBA6 39 59 GOLGA5 Golgin subfamily A member 5 yes yes 3 0.00074194 81.016 By MS/MS By matching 1 1 2827900 1638600 1189300 2234 1815 2408 5116;5117 4279 4279 4397 1 NTFAEVTGLSPGVTYYFK GQRLPISRNTFAEVTG PGVTYYFKVFAVSHGR R N T F K V 1 0 1 0 0 0 1 2 0 0 1 1 0 2 1 1 3 0 2 2 0 0 18 0 1992.9833 P02751 P02751 959 976 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 2.4869E-29 124.47 By MS/MS By MS/MS 1 1 11772000 5431200 6341000 2235 1212 2409 5118;5119 4280;4281;4282 4281 3 NTGVSPASRPSPGTPTSPSNLTSGLK SSLTSVMKNTGVSPAS SNLTSGLKTPAPATTT K N T L K T 1 1 2 0 0 0 0 3 0 0 2 1 0 0 5 6 4 0 0 1 0 0 26 1 2509.2772 Q5VT52 Q5VT52 469 494 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.010683 43.523 By matching By MS/MS 2 2 16751000 7782700 8968400 2236 1644 2410;2411 5120;5121;5122;5123 4283;4284 4283 2295;2296;2297;3810;3811 1 NTLIIYLDK LDKAFSDRNTLIIYLD TLIIYLDKVSHSEDDC R N T D K V 0 0 1 1 0 0 0 0 0 2 2 1 0 0 0 0 1 0 1 0 0 0 9 0 1091.6227 P01024;M0QYC8;CON__Q2UVX4 P01024 1442 1450 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha chain;Complement C3c alpha chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha chain fragment 2 yes no 2 0.0020535 99.802 By MS/MS 1 657580 0 657580 + 2237 1207 2412 5124 4285 4285 1 NTLSLVNDFIIR NQTHAIYKNTLSLVND LVNDFIIRDTILNINF K N T I R D 0 1 2 1 0 0 0 0 0 2 2 0 0 1 0 1 1 0 0 1 0 0 12 0 1403.7773 P55259 P55259 299 310 GP2 Pancreatic secretory granule membrane major glycoprotein GP2 yes yes 2 0.0025784 140.17 By MS/MS 1 0 0 0 2238 1415 2413 5125 4286 4286 1 NTPSQHSHSIQHSPER LSTVHSAKNTPSQHSH SIQHSPERSGSGSVGN K N T E R S 0 1 1 0 0 2 1 0 3 1 0 0 0 0 2 4 1 0 0 0 0 0 16 0 1840.8565 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 256 271 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3;4 0.00046049 81.017 By MS/MS By MS/MS 4 4 967130000 398100000 569030000 2239 2073 2414;2415 5126;5127;5128;5129;5130;5131;5132;5133 4287;4288;4289;4290;4291 4288 2971;2972;3946 5 NTRFLRDPFSQALSR KPRQVVHKNTRFLRDP PFSQALSRCQLQQAAA K N T S R C 1 3 1 1 0 1 0 0 0 0 2 0 0 2 1 2 1 0 0 0 0 0 15 2 1806.9489 F8WEF8;Q96DF8 F8WEF8 248 262 DGCR14 Protein DGCR14 yes no 3 0.016973 46.131 By MS/MS 1 2201300 2201300 0 2240 772 2416 5134 4292 4292 1028;1029 1 NTSAEKELSSPISPK TKEAAAGRNTSAEKEL LSSPISPKSLQSDTPT R N T P K S 1 0 1 0 0 0 2 0 0 1 1 2 0 0 2 4 1 0 0 0 0 0 15 1 1586.8152 E9PGC8;P78559 E9PGC8 2248 2262 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.00071241 76.586 By matching By MS/MS 1 1 5184900 2486200 2698800 2241 633 2417 5135;5136 4293 4293 854;855 1 NTSLPPLWSPEAER DKDITVSKNTSLPPLW LWSPEAERSHSLSQHT K N T E R S 1 1 1 0 0 0 2 0 0 0 2 0 0 0 3 2 1 1 0 0 0 0 14 0 1595.7944 P49790 P49790 201 214 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.0071395 60.55 By MS/MS By MS/MS 1 1 3495100 1692000 1803100 2242 1383 2418 5137;5138 4294;4295 4295 1856;1857 2 NVAEALGHSPKDPGGGGGPVR PSPIAALKNVAEALGH GGGGGPVRAGGASPAA K N V V R A 2 1 1 1 0 0 1 6 1 0 1 1 0 0 3 1 0 0 0 2 0 0 21 1 1970.9922 Q8IU81 Q8IU81 428 448 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 3 0.014545 45.099 By MS/MS By matching 1 1 5216400 3347200 1869300 2243 1747 2419 5139;5140 4296 4296 2461 1 NVALLSQLYHSPAR AANPNQNKNVALLSQL QLYHSPARRFGGPVHH K N V A R R 2 1 1 0 0 1 0 0 1 0 3 0 0 0 1 2 0 0 1 1 0 0 14 0 1567.8471 Q15717 Q15717 192 205 ELAVL1 ELAV-like protein 1 yes yes 2 2.9636E-06 104.21 By MS/MS By MS/MS 1 1 4124500 1870100 2254400 2244 1566 2420 5141;5142 4297;4298 4297 2162 2 NVLIVEDIIDTGK DLSTLTGKNVLIVEDI EDIIDTGKTMQTLLSL K N V G K T 0 0 1 2 0 0 1 1 0 3 1 1 0 0 0 0 1 0 0 2 0 0 13 0 1427.7872 P00492 P00492 129 141 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.0067385 67.93 By MS/MS By MS/MS 1 1 2578300 1613600 964700 2245 1203 2421 5143;5144 4299;4300 4299 2 NVPQEESLEDSDVDADFK DEHLLKKRNVPQEESL SDVDADFKAQNVTLEA R N V F K A 1 0 1 4 0 1 3 0 0 0 1 1 0 1 1 2 0 0 0 2 0 0 18 0 2035.8858 O00505 O00505 50 67 KPNA3 Importin subunit alpha-4 yes yes 2 0.0089634 53.779 By matching By MS/MS 1 1 16832000 8828200 8004100 2246 1086 2422 5145;5146 4301 4301 1426 1 NVQALEIELQSQLALK SEITELRRNVQALEIE LQSQLALKQSLEASLA R N V L K Q 2 0 1 0 0 3 2 0 0 1 4 1 0 0 0 1 0 0 0 1 0 0 16 0 1796.0044 CON__P13645;P13645 CON__P13645 371 386 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 1.9031E-71 150.14 By MS/MS By MS/MS 1 2 7915300 3789800 4125500 + 2247 506 2423 5147;5148;5149 4302;4303;4304 4304 3 NVSSFPDDATSPLQENR DDQMLKRRNVSSFPDD TSPLQENRNNQGTVNW R N V N R N 1 1 2 2 0 1 1 0 0 0 1 0 0 1 2 3 1 0 0 1 0 0 17 0 1875.8599 J3QLL0;J3KS65;P52292 J3QLL0 52 68 KPNA2 Importin subunit alpha-1 yes no 2 3.0205E-183 203.06 By MS/MS By MS/MS 1 1 25229000 11653000 13575000 2248 1017 2424 5150;5151 4305;4306;4307;4308;4309;4310 4309 1354;3563 6 NVTELNEPLSNEER DDMAAAMKNVTELNEP EPLSNEERNLLSVAYK K N V E R N 0 1 3 0 0 0 4 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1642.7798 P61981 P61981 29 42 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 0.017921 54.7 By matching By MS/MS 1 1 930180 514020 416160 2249 1424 2425 5152;5153 4311 4311 1 NWGAVVRSPEGTPQK AFAVGVEKNWGAVVRS SPEGTPQKIRQLIDEG K N W Q K I 1 1 1 0 0 1 1 2 0 0 0 1 0 0 2 1 1 1 0 2 0 0 15 1 1624.8322 C9J0I9;Q86WB0;F8WBD7;F8WDK5;F8WF13;F8WAU5 C9J0I9 17 31 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.020258 57.148 By MS/MS By matching 1 1 6289700 2530400 3759300 2250 432 2426 5154;5155 4312 4312 616 1 NWTEDMEGGISSPVKK SSPTSSSRNWTEDMEG GISSPVKKTEMDKSPF R N W K K T 0 0 1 1 0 0 2 2 0 1 0 2 1 0 1 2 1 1 0 1 0 0 16 1 1776.8352 P08651 P08651 312 327 NFIC Nuclear factor 1 C-type yes yes 2 0.0023868 74.141 By matching By MS/MS 1 1 3606600 1708400 1898200 2251 1242 2427 5156;5157 4313 4313 1641 1 NYGSYSTQASAAAATAELLK KLSPTEPKNYGSYSTQ AATAELLKKQEELNRK K N Y L K K 6 0 1 0 0 1 1 1 0 0 2 1 0 0 0 3 2 0 2 0 0 0 20 0 2015.98 O14828 O14828 82 101 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 7.2408E-71 147.7 By MS/MS By MS/MS 2 2 11397000 4944200 6452800 2252 1097 2428;2429 5158;5159;5160;5161 4314;4315;4316 4315 1461;4233 3 NYGYNPSPVKPEGLR SVVTESSRNYGYNPSP PVKPEGLRRPPSKTSM R N Y L R R 0 1 2 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 2 1 0 0 15 1 1689.8475 E9PRF4;Q15047 E9PRF4 1060 1074 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes no 2;3 0.01058 61.097 By MS/MS By MS/MS 2 2 13516000 7362200 6153800 2253 679 2430 5162;5163;5164;5165 4317;4318;4319;4320 4318 918 4 NYQQNYQNSESGEKNEGSESAPEGQAQQR PRRRGPPRNYQQNYQN PEGQAQQRRPYRRRRF R N Y Q R R 2 1 4 0 0 6 5 3 0 0 0 1 0 0 1 4 0 0 2 0 0 0 29 1 3256.3889 H0Y449;P67809;C9J5V9 H0Y449 207 235 YBX1 Nuclease-sensitive element-binding protein 1 yes no 3 5.6919E-07 69.619 By MS/MS By MS/MS 3 3 42521000 25704000 16817000 2254 822 2431;2432 5166;5167;5168;5169;5170;5171 4321;4322;4323 4321 1105;1106 3 NYQSQADIPIRSPFGIVK VGSRGSKKNYQSQADI RSPFGIVKASWLPKFS K N Y V K A 1 1 1 1 0 2 0 1 0 3 0 1 0 1 2 2 0 0 1 1 0 0 18 1 2032.0742 Q14966;A0A096LPH6 Q14966 372 389 ZNF638 Zinc finger protein 638 yes no 3 0.0024259 62.104 By matching By MS/MS 1 1 1770100 755520 1014500 2255 1531 2433 5172;5173 4324 4324 2111 1 NYSSPPPCHLSR DSNRIGRRNYSSPPPC PPPCHLSRQVPYDEIS R N Y S R Q 0 1 1 0 1 0 0 0 1 0 1 0 0 0 3 3 0 0 1 0 0 0 12 0 1413.6459 Q12986 Q12986 47 58 NFX1 Transcriptional repressor NF-X1 yes yes 2 0.016983 56.122 By MS/MS By MS/MS 1 1 3101200 1257100 1844100 2256 1485 2434 5174;5175 4325;4326 4326 2026;2027 2 PAMPQDSVPSPR VAPAKKAKPAMPQDSV QDSVPSPRSLQGKSTT K P A P R S 1 1 0 1 0 1 0 0 0 0 0 0 1 0 4 2 0 0 0 1 0 0 12 0 1280.6183 P53396 P53396 472 483 ACLY ATP-citrate synthase yes yes 2 0.0021808 77.279 By matching By MS/MS 1 1 1681900 770280 911580 2257 1404 2435 5176;5177 4327 4327 1894;1895 1 PAPAPPLYSSLT QGNLIPARPAPAPPLY PPLYSSLT________ R P A L T - 2 0 0 0 0 0 0 0 0 0 2 0 0 0 4 2 1 0 1 0 0 0 12 0 1212.639 Q13443;A0A0J9YY58 Q13443 808 819 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes no 2 0.0039843 61.962 By MS/MS 1 415990 0 415990 2258 1504 2436 5178 4328 4328 4347 1 PAPPPQSQSPEVEQLGR LQMALNGKPAPPPQSQ PEVEQLGRVVELDSDM K P A G R V 1 1 0 0 0 3 2 1 0 0 1 0 0 0 5 2 0 0 0 1 0 0 17 0 1815.9115 P52948 P52948 926 942 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 3 0.021792 42.191 By matching By MS/MS 1 1 1162600 453300 709260 2259 1402 2437 5179;5180 4329 4329 1891 1 PASLYQSSIDRSLER SSILQHERPASLYQSS SIDRSLERPMSSASMA R P A E R P 1 2 0 1 0 1 1 0 0 1 2 0 0 0 1 4 0 0 1 0 0 0 15 1 1720.8744 H7BZK1;O94875 H7BZK1 172 186 SORBS2 Sorbin and SH3 domain-containing protein 2 yes no 3 0.019873 45.115 By matching By MS/MS 1 1 579060 280970 298080 2260 948 2438 5181;5182 4330 4330 1274 0 PASPDRFAVSAEAENK ________________ VSAEAENKVREQQPHV R P A N K V 4 1 1 1 0 0 2 0 0 0 0 1 0 1 2 2 0 0 0 1 0 0 16 1 1687.8166 G3V331;O15037 G3V331 8 23 KHNYN Protein KHNYN yes no 3 0.0036769 57.794 By MS/MS By matching 1 1 970700 479470 491230 2261 788 2439 5183;5184 4331 4331 1047 1 PATPGASSVEQLRK GPGTPEPRPATPGASS SSVEQLRKEGNELFKC R P A R K E 2 1 0 0 0 1 1 1 0 0 1 1 0 0 2 2 1 0 0 1 0 0 14 1 1439.7732 Q9H3U1 Q9H3U1 13 26 UNC45A Protein unc-45 homolog A yes yes 2;3 0.00024717 74.338 By MS/MS By MS/MS 2 2 10659000 4802600 5855900 2262 2003 2440 5185;5186;5187;5188 4332;4333;4334;4335 4334 3924 4 PAVAQQQQQQQQQQQPPGSGGK P A G K 2 0 0 0 0 11 0 3 0 0 0 1 0 0 3 1 0 0 0 1 0 0 22 0 2345.1472 REV__O00555 yes yes 3 0.017 36.253 By MS/MS 2 1144700 1144700 0 + 2263 2203 2441 5189;5190 4336 4336 1 PCSEETPAISPSK ________________ TPAISPSKRARPAEVG M P C S K R 1 0 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 13 0 1401.6446 H0YNJ9 H0YNJ9 2 14 DUT yes yes 2 1.6133E-06 109.48 By MS/MS By MS/MS 1 1 17412000 7643500 9768100 2264 901 2442 5191;5192 4337;4338 4337 1208;1209 2 PCSEETPAISPSKR ________________ PAISPSKRARPAEVGG M P C K R A 1 1 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 14 1 1557.7457 H0YNJ9 H0YNJ9 2 15 DUT yes yes 2;3 0 293.38 By MS/MS By MS/MS 2 2 555200000 278380000 276820000 2265 901 2443 5193;5194;5195;5196 4339;4340;4341;4342;4343;4344;4345;4346 4342 1208;1209 8 PDATMVVKNHQLTVTR HPGSDPTKPDATMVVK NHQLTVTRGSQKDYRK K P D T R G 1 1 1 1 0 1 0 0 1 0 1 1 1 0 1 0 3 0 0 3 0 0 16 1 1808.9567 CON__Q0V8M9 CON__Q0V8M9 834 849 yes yes 2 0.0076488 49.466 By matching By MS/MS 1 1 2484100 928790 1555300 + 2266 507 2444 5197;5198 4347 4347 367 3381;3382;3383 1 PDVKQSKMAEFLDWSLCNLAR LVSRFITRPDVKQSKM WSLCNLARSSFQTMQG R P D A R S 2 1 1 2 1 1 1 0 0 0 3 2 1 1 1 2 0 1 0 1 0 0 21 2 2507.2301 J3KR97;Q9BTW9 J3KR97 218 238 TBCD Tubulin-specific chaperone D yes no 3 0.0091819 47.088 By matching By MS/MS 1 1 1939700 907700 1032000 2267 1012 2445 5199;5200 4348 4348 116 1347;1348 1 PENFQKGCQMYLEK RMLEDWIKPENFQKGC GCQMYLEKYQFKNAKT K P E E K Y 0 0 1 0 1 2 2 1 0 0 1 2 1 1 1 0 0 0 1 0 0 0 14 1 1770.8069 H0YA67;Q07075 H0YA67 35 48 ENPEP Glutamyl aminopeptidase yes no 3 0.014622 43.03 By matching By MS/MS 1 1 2688600 1292800 1395800 2268 860 2446 5201;5202 4349 4349 126 4183 1 PFIYQEVIDLGGEPIK NWFPAGSKPFIYQEVI DLGGEPIKSSDYFGNG K P F I K S 0 0 0 1 0 1 2 2 0 3 1 1 0 1 2 0 0 0 1 1 0 0 16 0 1816.9611 P19961;P04746;P04745 P19961 243 258 AMY2B;AMY2A;AMY1A Alpha-amylase 2B;Pancreatic alpha-amylase;Alpha-amylase 1 yes no 2 1.0982E-05 117.93 By MS/MS 1 5750400 5750400 0 2269 1218 2447 5203 4350 4350 1 PFSAPKPQTSPSPK GPVRSGPKPFSAPKPQ PQTSPSPKRATKKEPA K P F P K R 1 0 0 0 0 1 0 0 0 0 0 2 0 1 5 3 1 0 0 0 0 0 14 1 1467.7722 Q01518 Q01518 299 312 CAP1 Adenylyl cyclase-associated protein 1 yes yes 2 0.0011224 79.875 By matching By MS/MS 1 1 1218500 586890 631590 2270 1450 2448 5204;5205 4351 4351 1932;3726 1 PFSNSHNALK ________________ SNSHNALKLRFPAEDE M P F L K L 1 0 2 0 0 0 0 0 1 0 1 1 0 1 1 2 0 0 0 0 0 0 10 0 1113.5567 G3V4N7;P12277;G3V2I1 G3V4N7 2 11 CKB Creatine kinase B-type yes no 2 0.0056664 79.283 By matching By MS/MS 1 1 4923100 2387900 2535200 2271 798 2449 5206;5207 4352 4352 1058 1 PGEEKTILHVKEMYDYQGR KGKQEEEKPGEEKTIL EMYDYQGRSYLHIPQD K P G G R S 0 1 0 1 0 1 3 2 1 1 1 2 1 0 1 0 1 0 2 1 0 0 19 2 2292.1209 Q5SRN1;O60508 Q5SRN1 234 252 CDC40 Pre-mRNA-processing factor 17 yes no 3 0.005205 55.864 By MS/MS By matching 1 1 2151200 1069900 1081300 2272 1139 2450 5208;5209 4353 4353 399 3612;4246;4247 1 PGGPPNPPGPSPK LKRRTQSRPGGPPNPP NPPGPSPKALAKMMGG R P G P K A 0 0 1 0 0 0 0 3 0 0 0 1 0 0 7 1 0 0 0 0 0 0 13 0 1197.6142 B9EGQ5;M0QXA7;O95785 B9EGQ5 277 289 WIZ Protein Wiz yes no 2 0.0055453 66.92 By MS/MS 1 1113900 0 1113900 2273 423 2451 5210 4354 4354 596 1 PGPPGSPR AVSPGSWKPGPPGSPR PGPPGSPRPWKSNPSA K P G P R P 0 1 0 0 0 0 0 2 0 0 0 0 0 0 4 1 0 0 0 0 0 0 8 0 763.39769 Q96JM3 Q96JM3 314 321 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.021288 64.654 By MS/MS 1 0 0 0 2274 1903 2452 5211 4355 4355 2698 1 PGPTPSGTNVGSSGRSPSK ________________ SSGRSPSKAVAARAAG M P G S K A 0 1 1 0 0 0 0 4 0 0 0 1 0 0 4 5 2 0 0 1 0 0 19 1 1768.8704 P60468 P60468 2 20 SEC61B Protein transport protein Sec61 subunit beta yes yes 3 3.0491E-06 96.579 By MS/MS By MS/MS 1 1 159480000 69112000 90364000 2275 1421 2453 5212;5213 4356;4357 4356 1911;1912 2 PGVTEATITGLEPGTEYTIYVIALK REVVPRPRPGVTEATI TIYVIALKNNQKSEPL R P G L K N 2 0 0 0 0 0 3 3 0 3 2 1 0 0 2 0 5 0 2 2 0 0 25 0 2635.3997 P02751;H0Y7Z1;H0Y4K8 P02751 1953 1977 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 1.006E-11 117.22 By MS/MS 1 0 0 0 2276 1212 2454 5214 4358 4358 1 PGWLSSPTLGR GGPLPLPRPGWLSSPT LSSPTLGRANRFLSTA R P G G R A 0 1 0 0 0 0 0 2 0 0 2 0 0 0 2 2 1 1 0 0 0 0 11 0 1169.6193 C9JS59;C9J266;Q5XPI4 C9JS59 670 680 RNF123 E3 ubiquitin-protein ligase RNF123 yes no 2 0.0077935 65.842 By MS/MS By MS/MS 1 1 2249900 917240 1332700 2277 437 2455 5215;5216 4359;4360 4359 628;629 2 PHSPRKNFMK P H M K 0 1 1 0 0 0 0 0 1 0 0 2 1 1 2 1 0 0 0 0 0 0 10 2 1240.6499 REV__A0A087X203 yes no 3 0.017165 46.462 By MS/MS By matching 1 1 2399500 997780 1401700 + 2278 2183 2456 5217;5218 4361 4361 329 3172 0 PIFGGTVYHSPVSR ________________ VYHSPVSRLPPSGSKP R P I S R L 0 1 0 0 0 0 0 2 1 1 0 0 0 1 2 2 1 0 1 2 0 0 14 0 1515.7834 H0YNE4;G3V3N7;O43663 H0YNE4 5 18 PRC1 Protein regulator of cytokinesis 1 yes no 3 0.0026986 63.691 By MS/MS By matching 1 1 1449300 623970 825290 2279 793 2457 5219;5220 4362 4362 1053 1 PINNMTATYNQLSRSTSGPRPGCQPSSPCVPK TSCLPPSRPINNMTAT PSSPCVPKLSNSDSQD R P I P K L 1 2 3 0 2 2 0 2 0 1 1 1 1 0 6 5 3 0 1 1 0 0 32 2 3501.6551 O14545 O14545 454 485 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 3 0.0010399 43.291 By MS/MS 1 1896000 0 1896000 2280 1092 2458 5221 4363 4363 150 1443;1444;1445;1446;1447;3594 1 PLGVSASSSSSSPGSPAHGGGGGGSR PRRSMEGRPLGVSASS GGGGGGSRFEFQSLLS R P L S R F 2 1 0 0 0 0 0 8 1 0 1 0 0 0 3 9 0 0 0 1 0 0 26 0 2196.0156 Q8IY26 Q8IY26 12 37 PPAPDC2 Presqualene diphosphate phosphatase yes yes 3 0.0076072 45.558 By matching By MS/MS 1 1 2256800 1023300 1233500 2281 1758 2459 5222;5223 4364 4364 2473 1 PLKPLSPLR RNYSVGSRPLKPLSPL LKPLSPLRAQDMQEGA R P L L R A 0 1 0 0 0 0 0 0 0 0 3 1 0 0 3 1 0 0 0 0 0 0 9 1 1019.6492 O60825 O60825 488 496 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 2 0.017945 84.687 By matching By MS/MS 1 1 1451700 598840 852840 2282 1147 2460 5224;5225 4365 4365 1525 1 PLLLSFFCALVDEQLDCKDALHGSEGR P L G R 2 1 0 3 2 1 2 2 1 0 6 1 0 2 1 2 0 0 0 1 0 0 27 1 3089.495 REV__D6RAT4 yes yes 4 0.022465 40.142 By MS/MS 1 298300 298300 0 + 2283 2192 2461 5226 4366 4366 3180 0 PLLSNASATPVGR EKAASPPRPLLSNASA ASATPVGRRGRLANLA R P L G R R 2 1 1 0 0 0 0 1 0 0 2 0 0 0 2 2 1 0 0 1 0 0 13 0 1281.7041 Q9NQW6 Q9NQW6 186 198 ANLN Actin-binding protein anillin yes yes 2 0.0018848 77.533 By MS/MS By MS/MS 1 1 50673000 18115000 32559000 2284 2043 2462 5227;5228 4367;4368 4367 2917;3938 2 PLLVDVDLQYPQDAVLALTQNHHK GFYSQVAKPLLVDVDL ALTQNHHKQYYEGSEI K P L H K Q 2 0 1 3 0 3 0 0 2 0 5 1 0 0 2 0 1 0 1 3 0 0 24 0 2726.4392 P19827;H7C0N0 P19827 478 501 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 4 0.0001478 64.377 By MS/MS By MS/MS 1 1 3823600 2185900 1637700 2285 1296 2463 5229;5230 4369;4370 4369 2 PLSGVEESLR P L L R 0 1 0 0 0 0 2 1 0 0 2 0 0 0 1 2 0 0 0 1 0 0 10 0 1085.5717 REV__Q8NGA4 yes yes 2 0.0067466 73.499 By MS/MS By matching 2 1 2109500 1158100 951350 + 2286 2211 2464 5231;5232;5233 4371 4371 3198 1 PLSPGALQLAGEK KLSPQDPRPLSPGALQ ALQLAGEKSSEKGLRE R P L E K S 2 0 0 0 0 1 1 2 0 0 3 1 0 0 2 1 0 0 0 0 0 0 13 0 1279.7136 Q8TEK3 Q8TEK3 832 844 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 0.005082 68.033 By MS/MS By MS/MS 1 1 1269300 571490 697810 2287 1825 2465 5234;5235 4372;4373 4372 2573 2 PLYEGLGSGGEK ________________ GLGSGGEKTAVVIDLG M P L E K T 0 0 0 0 0 0 2 4 0 0 2 1 0 0 1 1 0 0 1 0 0 0 12 0 1205.5928 G3V4K6;G3V524;G3V2Q5;G3V5Y4;F6S9Y6;Q9NZ32 G3V4K6 2 13 ACTR10 Actin-related protein 10 yes no 2 0.00077171 80.916 By MS/MS By MS/MS 1 1 8820500 3706900 5113600 2288 727 2466 5236;5237 4374;4375 4374 4161 2 PMAETVSTQVGTEGGLR ________________ VGTEGGLRASHQQNGD - P M L R A 1 1 0 0 0 1 2 3 0 0 1 0 1 0 1 1 3 0 0 2 0 0 17 0 1731.8461 A0A087WXE2 A0A087WXE2 1 17 RPUSD2 yes yes 3 0.015742 44.294 By MS/MS 1 9688200 0 9688200 2289 72 2467 5238 4376 4376 93;3230;3231 1 PMEEDGEEKSPSKK YAITPMKRPMEEDGEE EEKSPSKKKKKIQKKE R P M K K K 0 0 0 1 0 0 4 1 0 0 0 3 1 0 2 2 0 0 0 0 0 0 14 2 1589.7243 Q12906 Q12906 373 386 ILF3 Interleukin enhancer-binding factor 3 yes yes 3 0.013332 58.268 By matching By MS/MS 1 1 1879700 751930 1127800 2290 1482 2468 5239;5240 4377 4377 2016 1 PMIIYRGGTSR LMSLFGGKPMIIYRGG IYRGGTSREGGQTAPA K P M S R E 0 2 0 0 0 0 0 2 0 2 0 0 1 0 1 1 1 0 1 0 0 0 11 1 1249.6601 CON__Q3SX14 CON__Q3SX14 542 552 yes yes 2 0.0094578 55.258 By MS/MS 1 551270 551270 0 + 2291 510 2469 5241 4378 4378 61 695;4130 0 PNSPSISPSILSNTEHK NCTSGSSKPNSPSISP ILSNTEHKRGPEVTSQ K P N H K R 0 0 2 0 0 0 1 0 1 2 1 1 0 0 3 5 1 0 0 0 0 0 17 0 1806.9112 F8W0B5;H0YH87;F8WB06;F8VQP2;V9GY86;Q99700 F8W0B5 237 253 ATXN2 Ataxin-2 yes no 3 0.015469 40.237 By matching By MS/MS 1 1 1546900 509070 1037900 2292 734 2470 5242;5243 4379 4379 108;109 980 1 PNTSYEFQVKPK FSTVENLKPNTSYEFQ YEFQVKPKNPLGEGPV K P N P K N 0 0 1 0 0 1 1 0 0 0 0 2 0 1 2 1 1 0 1 1 0 0 12 1 1436.73 D3YTG3;Q7Z7G0;H0Y897 D3YTG3 1605 1616 ABI3BP Target of Nesh-SH3 yes no 3 0.011499 54.486 By MS/MS 1 663870 0 663870 2293 518 2471 5244 4380 4380 75;369 707;3390 0 PPHSLSSNAR AGVHSGERPPHSLSSN HSLSSNARTAVPSPVE R P P A R T 1 1 1 0 0 0 0 0 1 0 1 0 0 0 2 3 0 0 0 0 0 0 10 0 1064.5363 Q147X3;J3KNC2 Q147X3 138 147 NAA30 N-alpha-acetyltransferase 30 yes no 1 0.022114 40.727 By MS/MS 1 167620 167620 0 2294 1529 2472 5245 4381 4381 2107 0 PPRATSACAPISSPKTNGLSK TVKVPGKRPPRATSAC PKTNGLSKDMSSLHIS R P P S K D 3 1 1 0 1 0 0 1 0 1 1 2 0 0 4 4 2 0 0 0 0 0 21 2 2139.1106 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C211 A0A087X1U1 356 376 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.0020664 68.033 By matching By MS/MS 1 1 17345000 1160600 16185000 2295 111 2473 5246;5247 4382 4382 142;143;3244 1 PQEKGHSPEDIYQMALNQALK EKLGYALRPQEKGHSP MALNQALKDLKALGCR R P Q L K D 2 0 1 1 0 3 2 1 1 1 2 2 1 0 2 1 0 0 1 0 0 0 21 1 2396.1794 Q96RQ9 Q96RQ9 172 192 IL4I1 L-amino-acid oxidase yes yes 3 0.013249 40.432 By MS/MS By matching 1 1 2022000 1341300 680680 2296 1925 2474 5248;5249 4383 4383 272 4424 1 PQGMEGFLK RTSQPNYRPQGMEGFL QGMEGFLKSDERQRLA R P Q L K S 0 0 0 0 0 1 1 2 0 0 1 1 1 1 1 0 0 0 0 0 0 0 9 0 1005.4954 Q96T17 Q96T17 42 50 MAP7D2 MAP7 domain-containing protein 2 yes yes 2 0.015053 56.011 By MS/MS By MS/MS 1 1 8345700 3504100 4841600 2297 1932 2475 5250;5251 4384;4385 4384 281 0 PQKTMPTVQR NQSISLFKPQKTMPTV KTMPTVQRKDIQIPMS K P Q Q R K 0 1 0 0 0 2 0 0 0 0 0 1 1 0 2 0 2 0 0 1 0 0 10 1 1184.6336 Q5JVX7 Q5JVX7 268 277 C1orf141 Uncharacterized protein C1orf141 yes yes 2 0.012386 55.112 By MS/MS 1 0 0 0 2298 1611 2476 5252 4386 4386 232 1 PQPGSFNKQDSK ISNSGKARPQPGSFNK SFNKQDSKADVPQKAD R P Q S K A 0 0 1 1 0 2 0 1 0 0 0 2 0 1 2 2 0 0 0 0 0 0 12 1 1331.647 B8ZZB0;C9IYK9;F5GZA4;E7ESC5;Q96AQ1;Q96LY2 B8ZZB0 162 173 CCDC74B;CCDC74A Coiled-coil domain-containing protein 74A;Coiled-coil domain-containing protein 74B yes no 2 0.019091 48.091 By MS/MS 1 1014100 1014100 0 2299 418 2477 5253 4387 4387 63 583;584 0 PQTSGEEELQLQLALAMSR TSDLEQARPQTSGEEE QLALAMSREEAEKPVP R P Q S R E 2 1 0 0 0 3 3 1 0 0 4 0 1 0 1 2 1 0 0 0 0 0 19 0 2100.0521 I6L9I8;F6PQP6;E9PBC1;I3L2B2;Q9H201;O95208 I6L9I8 204 222 EPN3;EPN2 Epsin-3;Epsin-2 yes no 3 0.017873 44.052 By MS/MS 1 975090 975090 0 2300 607 2478 5254 4388 4388 836 0 PRPGVTEATITGLEPGTEYTIYVIALK PPREVVPRPRPGVTEA TIYVIALKNNQKSEPL R P R L K N 2 1 0 0 0 0 3 3 0 3 2 1 0 0 3 0 5 0 2 2 0 0 27 1 2888.5535 P02751;H0Y7Z1;H0Y4K8 P02751 1951 1977 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 2.5271E-36 116.55 By MS/MS By MS/MS 1 1 50405000 23519000 26886000 2301 1212 2479 5255;5256 4389;4390;4391 4391 3 PSALNAGNSNLK PALVNYNRPSALNAGN NAGNSNLKTPADSVSG R P S L K T 2 0 3 0 0 0 0 1 0 0 2 1 0 0 1 2 0 0 0 0 0 0 12 0 1184.6149 A0A1B0GU54 A0A1B0GU54 262 273 yes yes 2 0.019597 54.539 By MS/MS 1 1293200 0 1293200 2302 292 2480 5257 4392 4392 51;52 414 1 PSEPSEPTITKEDKTR ENKFGLSKPSEPSEPT ITKEDKTRAMNYDEEV K P S T R A 0 1 0 1 0 0 3 0 0 1 0 2 0 0 3 2 3 0 0 0 0 0 16 2 1813.9058 A0A0A0MTS7;Q8WZ42;A0A0A0MRA3 A0A0A0MTS7 33773 33788 TTN Titin yes no 2 0.0082421 52.391 By matching By MS/MS 1 1 3950800 2336200 1614600 2303 186 2481 5258;5259 4393 4393 267;3283 1 PSGQISDPSR STGTQVTRPSGQISDP GQISDPSRSYFVVVNH R P S S R S 0 1 0 1 0 1 0 1 0 1 0 0 0 0 2 3 0 0 0 0 0 0 10 0 1042.5043 Q14207 Q14207 160 169 NPAT Protein NPAT yes yes 2 0.011124 58.071 By MS/MS 1 1210200 1210200 0 2304 1518 2482 5260 4394 4394 416 2078;2079 1 PSMSPTPLDR SRMSCFSRPSMSPTPL MSPTPLDRCRSPGMLE R P S D R C 0 1 0 1 0 0 0 0 0 0 1 0 1 0 3 2 1 0 0 0 0 0 10 0 1099.5332 Q9UQ35 Q9UQ35 2120 2129 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0050817 81.676 By matching By MS/MS 1 1 1956200 627840 1328400 2305 2134 2483 5261;5262 4395 4395 3076 1 PSSSPVIFAGGQDR VTIPYRPKPSSSPVIF IFAGGQDRYSTGSDSA K P S D R Y 1 1 0 1 0 1 0 2 0 1 0 0 0 1 2 3 0 0 0 1 0 0 14 0 1416.6997 H3BSS4;Q15366 H3BSS4 17 30 PCBP2 Poly(rC)-binding protein 2 yes no 2 1.2237E-12 115.82 By matching By MS/MS 1 1 9423000 2481200 6941800 2306 930 2484 5263;5264 4396 4396 1248 1 PTCKPSWQGWNK AEVEIQVKPTCKPSWQ PSWQGWNKRIEYAPGA K P T N K R 0 0 1 0 1 1 0 1 0 0 0 2 0 0 2 1 1 2 0 0 0 0 12 1 1487.698 Q9BQT9 Q9BQT9 240 251 CLSTN3 Calsyntenin-3 yes yes 2 0.018608 46.462 By MS/MS By matching 1 1 813400 368000 445390 2307 1954 2485 5265;5266 4397 4397 283 1 PTLNRPVSR DKLHLTQRPTLNRPVS TLNRPVSRAALRTALQ R P T S R A 0 2 1 0 0 0 0 0 0 0 1 0 0 0 2 1 1 0 0 1 0 0 9 1 1038.5934 P55103 P55103 61 69 INHBC Inhibin beta C chain yes yes 2 0.016416 50.632 By matching By MS/MS 1 1 2658800 1249700 1409100 2308 1414 2486 5267;5268 4398 4398 202 1904;3716 1 PTSSPAKGPPQK LGNILQAKPTSSPAKG PAKGPPQKAGPVAVQV K P T Q K A 1 0 0 0 0 1 0 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 12 1 1193.6404 J3KQ96;E7ETY2;Q13428 J3KQ96 580 591 TCOF1 Treacle protein yes no 2;3 1.2779E-20 143.94 By MS/MS By MS/MS 2 2 44030000 18556000 25474000 2309 591 2487 5269;5270;5271;5272 4399;4400;4401;4402 4402 799;800;3422 4 PVDIVFLLDGSER SVAQCTQRPVDIVFLL FLLDGSERLGEQNFHK R P V E R L 0 1 0 2 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 2 0 0 13 0 1458.7718 P12110 P12110 831 843 COL6A2 Collagen alpha-2(VI) chain yes yes 2 4.1455E-80 178.54 By MS/MS By MS/MS 1 2 15068000 5084700 9983600 2310 1263 2488 5273;5274;5275 4403;4404 4404 2 PVLTQPPSLSASPGATAR HCTGSLSRPVLTQPPS ASPGATARLPCTLSSD R P V A R L 3 1 0 0 0 1 0 1 0 0 2 0 0 0 4 3 2 0 0 1 0 0 18 0 1748.9421 A0A075B6I3 A0A075B6I3 21 38 IGLV11-55 yes yes 3 0.016469 40.693 By MS/MS By matching 1 1 4094600 2115000 1979500 2311 5 2489 5276;5277 4405 4405 3;4 1 PVPDSPVSVTR TFALQHPRPVPDSPVS DSPVSVTRL_______ R P V T R L 0 1 0 1 0 0 0 0 0 0 0 0 0 0 3 2 1 0 0 3 0 0 11 0 1152.6139 G3XAC1;A0A0C4DFT5;Q9BXS9 G3XAC1 640 650 SLC26A6 Solute carrier family 26 member 6 yes no 2 0.0039823 77.185 By MS/MS By MS/MS 1 1 2670800 954260 1716500 2312 197 2490 5278;5279 4406;4407 4407 286 2 PVPDSPVSVTRL TFALQHPRPVPDSPVS SPVSVTRL________ R P V R L - 0 1 0 1 0 0 0 0 0 0 1 0 0 0 3 2 1 0 0 3 0 0 12 1 1265.698 G3XAC1;A0A0C4DFT5;Q9BXS9 G3XAC1 640 651 SLC26A6 Solute carrier family 26 member 6 yes no 2 0.0049664 75.294 By MS/MS By matching 1 1 2384800 866300 1518500 2313 197 2491 5280;5281 4408 4408 286 1 PVSSAASVYAGAGGSGSR QAPSYGARPVSSAASV GAGGSGSRISVSRSTS R P V S R I 4 1 0 0 0 0 0 4 0 0 0 0 0 0 1 5 0 0 1 2 0 0 18 0 1579.759 F8VZY9;P05783 F8VZY9 28 45 KRT18 Keratin, type I cytoskeletal 18 yes no 2 0.00025394 93.649 By MS/MS By MS/MS 1 1 5565900 3390700 2175100 2314 749 2492 5282;5283 4409;4410 4409 2 PVTVPSIDDYGRDR SAGPQRSRPVTVPSID IDDYGRDRLSPDFYEE R P V D R L 0 2 0 3 0 0 0 1 0 1 0 0 0 0 2 1 1 0 1 2 0 0 14 1 1588.7845 O15034 O15034 817 830 RIMBP2 RIMS-binding protein 2 yes yes 2 0.014132 61.78 By MS/MS 1 5880000 0 5880000 2315 1100 2493 5284 4411 4411 1 PYQYPALTPEQK ________________ PALTPEQKKELSDIAH M P Y Q K K 1 0 0 0 0 2 1 0 0 0 1 1 0 0 3 0 1 0 2 0 0 0 12 0 1433.7191 H3BQN4;J3KPS3;P04075;H3BUH7;H3BMQ8;H3BR04 H3BQN4 2 13 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0017436 90.827 By MS/MS By matching 1 1 2308700 980660 1328100 2316 921 2494 5285;5286 4412 4412 1 QAASPLEPK RLALLNEKQAASPLEP AASPLEPKELEELRDK K Q A P K E 2 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 0 939.50255 A0A087WY61;Q14980;F5H6Y5;F5H4J1 A0A087WY61 268 276 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.0023018 91.469 By matching By MS/MS 1 1 1903600 838180 1065500 2317 79 2495 5287;5288 4413 4413 100 1 QADSEMTGYVVTR ILDFGLARQADSEMTG MTGYVVTRWYRAPEVI R Q A T R W 1 1 0 1 0 1 1 1 0 0 0 0 1 0 0 1 2 0 1 2 0 0 13 0 1455.6664 B5MDL5;P53778 B5MDL5 87 99 MAPK12 Mitogen-activated protein kinase 12 yes no 2 1.1159E-51 164.33 By MS/MS By MS/MS 1 1 8643800 4134700 4509100 2318 397 2496 5289;5290 4414;4415 4414 3348;4096 2 QAESDMSK PRPWSYPRQAESDMSK QAESDMSKPPCYEEAV R Q A S K P 1 0 0 1 0 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 8 0 894.3753 D6RFJ4;Q8TB68 D6RFJ4 142 149 PRR7 Proline-rich protein 7 yes no 2 0.014435 54.066 By MS/MS 1 2449800 2449800 0 2319 537 2497 5291 4416;4417 4416 65 717 2 QAHVQYKK CEKVLSHKQAHVQYKK QAHVQYKKFQAREKPN K Q A K K F 1 0 0 0 0 2 0 0 1 0 0 2 0 0 0 0 0 0 1 1 0 0 8 1 1000.5454 B2ZWH0;A0A087WXA8;Q2M218 B2ZWH0 124 131 ZNF630 Zinc finger protein 630 yes no 1 0.017417 48.174 By MS/MS 1 470250 0 470250 2320 70 2498 5292 4418 4418 0 QALDSEEEEEDVAAK GRPQALSRQALDSEEE EEEDVAAKETLLRLSS R Q A A K E 3 0 0 2 0 1 5 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 15 0 1661.7268 H7C3D5;Q8NC44 H7C3D5 76 90 FAM134A Protein FAM134A yes no 2 0.0038163 62.357 By matching By MS/MS 1 1 16696000 7294500 9401100 2321 962 2499 5293;5294 4419 4419 1292 1 QALDSEEEEEDVAAKETLLR GRPQALSRQALDSEEE AAKETLLRLSSPLHFV R Q A L R L 3 1 0 2 0 1 6 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 20 1 2274.0863 H7C3D5;Q8NC44 H7C3D5 76 95 FAM134A Protein FAM134A yes no 3 0.0037316 61.52 By MS/MS By MS/MS 1 1 5782700 2424100 3358600 2322 962 2500 5295;5296 4420;4421 4421 1292 2 QALGSPLAGISTR TPGPELGRQALGSPLA PLAGISTRLPGPGEPV R Q A T R L 2 1 0 0 0 1 0 2 0 1 2 0 0 0 1 2 1 0 0 0 0 0 13 0 1269.7041 O14686 O14686 2848 2860 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.014064 51.546 By MS/MS 1 391680 0 391680 2323 1095 2501 5297 4422 4422 1459;1460 1 QALSDLMIKPVQR SMRENKEKQALSDLMI LMIKPVQRIPRYELLV K Q A Q R I 1 1 0 1 0 2 0 0 0 1 2 1 1 0 1 1 0 0 0 1 0 0 13 1 1497.8337 Q96PE2 Q96PE2 1200 1212 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes yes 2 0.0029503 90.108 By MS/MS By MS/MS 1 1 11567000 5253400 6313600 2324 1915 2502 5298;5299 4423;4424 4424 439;440 274 2 QASASYDSEEEEEGLPMSYDEKR RQLKKGGKQASASYDS PMSYDEKRQLSLDINR K Q A K R Q 2 1 0 2 0 1 6 1 0 0 1 1 1 0 1 4 0 0 2 0 0 0 23 1 2649.1024 Q15059 Q15059 556 578 BRD3 Bromodomain-containing protein 3 yes yes 3 0.0040294 48.706 By MS/MS By matching 1 1 11867000 5195900 6670900 2325 1542 2503 5300;5301 4425 4425 2127 1 QASLDGLQQLR GGGGRLLRQASLDGLQ LDGLQQLRDNMGSRRD R Q A L R D 1 1 0 1 0 3 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 11 0 1227.6571 Q3MII6 Q3MII6 504 514 TBC1D25 TBC1 domain family member 25 yes yes 2 9.647E-07 127.52 By MS/MS By MS/MS 1 1 8416100 4080300 4335800 2326 1584 2504 5302;5303 4426;4427 4427 2193 2 QASLPVSGSVAGDFVK RARPPVQKQASLPVSG SVAGDFVKKATSCRGL K Q A V K K 2 0 0 1 0 1 0 2 0 0 1 1 0 1 1 3 0 0 0 3 0 0 16 0 1560.8148 E9PCD1;H0Y7J9;H0Y493;H0Y7R3;F8W9F9;H0Y7T5;Q9Y3S1 E9PCD1 187 202 WNK2 Serine/threonine-protein kinase WNK2 yes no 2 0.00098658 77.324 By matching By MS/MS 1 1 6852700 3794600 3058100 2327 611 2505 5304;5305 4428 4428 840 1 QASNHSEKQK ELLAEATKQASNHSEK SNHSEKQKIRKPRPQR K Q A Q K I 1 0 1 0 0 2 1 0 1 0 0 2 0 0 0 2 0 0 0 0 0 0 10 1 1155.5632 Q9BZ95 Q9BZ95 346 355 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes yes 2 0.021785 40.015 By matching By MS/MS 1 1 2125500 1033000 1092500 2328 1982 2506 5306;5307 4429 4429 285 2819 0 QASPTEVVER FNRTPGSRQASPTEVV SPTEVVERLGPNTNPS R Q A E R L 1 1 0 0 0 1 2 0 0 0 0 0 0 0 1 1 1 0 0 2 0 0 10 0 1114.5619 Q8TB72;C9JW01;A0A0C4DG68;A0A0A0MR59 Q8TB72 180 189 PUM2 Pumilio homolog 2 yes no 2 1.8676E-13 142.89 By MS/MS By MS/MS 1 1 14545000 6543500 8001100 2329 1814 2507 5308;5309 4430;4431 4431 2557 2 QASSQECINVLLQYGCPDK NTALTYARQASSQECI LQYGCPDKCV______ R Q A D K C 1 0 1 1 2 3 1 1 0 1 2 1 0 0 1 2 0 0 1 1 0 0 19 0 2209.0144 A0A087WSV4;A0A087X0Z1;Q96P64 A0A087WSV4 643 661 AGAP4 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4 yes no 3 0.022231 42.149 By matching By MS/MS 1 1 1818800 869800 948970 2330 20 2508 5310;5311 4432 4432 4 22 0 QASTDAGTAGALTPQHVR PEPKSHSRQASTDAGT ALTPQHVRAHSSPASL R Q A V R A 4 1 0 1 0 2 0 2 1 0 1 0 0 0 1 1 3 0 0 1 0 0 18 0 1779.8864 P46937 P46937 107 124 YAP1 Transcriptional coactivator YAP1 yes yes 2;3 0.0062818 76.262 By MS/MS By matching 2 2 19021000 10133000 8888400 2331 1369 2509 5312;5313;5314;5315 4433;4434 4434 1815;3695 2 QATPGVPAQQSPSM GAMYTLPRQATPGVPA PAQQSPSM________ R Q A S M - 2 0 0 0 0 3 0 1 0 0 0 0 1 0 3 2 1 0 0 1 0 0 14 0 1397.6609 O60341 O60341 839 852 KDM1A Lysine-specific histone demethylase 1A yes yes 2 0.0075821 68.751 By MS/MS By matching 1 1 3270900 1596800 1674100 2332 1137 2510 5316;5317 4435 4435 137 1512 1 QAVEMKNDKSEEEQSSSSVK KIEKEQSKQAVEMKND EQSSSSVKKDETNVKM K Q A V K K 1 0 1 1 0 2 4 0 0 0 0 3 1 0 0 5 0 0 0 2 0 0 20 2 2239.0274 G3V5V7;G3V2D6;G3V4W0;B4DY08;B2R5W2;P07910 G3V5V7 108 127 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 3 0.0032721 51.225 By matching By MS/MS 1 1 2094600 1198800 895850 2333 364 2511 5318;5319 4436 4436 59 49 529 1 QAVGGAGPPNPAINGSAPR VQNLDKARQAVGGAGP AINGSAPRDLFDMKPF R Q A P R D 4 1 2 0 0 1 0 4 0 1 0 0 0 0 4 1 0 0 0 1 0 0 19 0 1729.886 H0Y539;X6R6D0;P29353 H0Y539 102 120 SHC1 SHC-transforming protein 1 yes no 2 0.0024268 71.601 By matching By MS/MS 1 1 1989900 860280 1129600 2334 830 2512 5320;5321 4437 4437 1118 1 QAYEPPPPPAYR HASRRPDRQAYEPPPP PPPPPAYRTGSLKPNP R Q A Y R T 2 1 0 0 0 1 1 0 0 0 0 0 0 0 5 0 0 0 2 0 0 0 12 0 1384.6776 Q15654;A0A0D9SFS2 Q15654 121 132 TRIP6 Thyroid receptor-interacting protein 6 yes no 2 0.009828 54.416 By MS/MS By matching 1 1 3621700 1717300 1904500 2335 1563 2513 5322;5323 4438 4438 4360 1 QCHALQEDMQTRSK AIYAEMSRQCHALQED EDMQTRSKQLEEEVKG R Q C S K Q 1 1 0 1 1 3 1 0 1 0 1 1 1 0 0 1 1 0 0 0 0 0 14 1 1730.7828 Q494R4 Q494R4 90 103 CCDC153 Coiled-coil domain-containing protein 153 yes yes 3 0.0022969 59.975 By MS/MS By MS/MS 1 1 15516000 7017600 8498700 2336 1586 2514 5324;5325 4439;4440 4440 422;423 227 3778 2 QCYQEVCNDRINANTITSPR LSKPAPYRQCYQEVCN ANTITSPRLAALTYKC R Q C P R L 1 2 3 1 2 2 1 0 0 2 0 0 0 0 1 1 2 0 1 1 0 0 20 1 2438.1067 Q8TE56 Q8TE56 1022 1041 ADAMTS17 A disintegrin and metalloproteinase with thrombospondin motifs 17 yes yes 2 0.019385 47.915 By MS/MS 1 0 0 0 2337 1823 2515 5326 4441 4441 256 3864 1 QDLIRELELMNSTSEDVAASHR EEEAEQYKQDLIRELE EDVAASHRCDAGSPSK K Q D H R C 2 2 1 2 0 1 3 0 1 1 3 0 1 0 0 3 1 0 0 1 0 0 22 1 2513.218 O75132 O75132 1027 1048 ZBED4 Zinc finger BED domain-containing protein 4 yes yes 3 0.021058 42.64 By MS/MS By matching 1 1 3051300 1638400 1412900 2338 1152 2516 5327;5328 4442 4442 1536;1537;3618 1 QDLYNKFKGR ________________ LYNKFKGRVRTVSPSS K Q D G R V 0 1 1 1 0 1 0 1 0 0 1 2 0 1 0 0 0 0 1 0 0 0 10 2 1267.6673 Q5VTX9;Q8IU57 Q5VTX9 7 16 IFNLR1 Interferon lambda receptor 1 yes no 2 0.011525 58.23 By matching By MS/MS 1 1 1247500 504460 743060 2339 1647 2517 5329;5330 4443 4443 222;426 0 QDPVTYISETDEEDDFMCKK SKPGKISRQDPVTYIS EDDFMCKKAASKSKEN R Q D K K A 0 0 0 4 1 1 3 0 0 1 0 2 1 1 1 1 2 0 1 1 0 0 20 1 2449.0301 P35251;D6RAD2 P35251 101 120 RFC1 Replication factor C subunit 1 yes no 3 0.008669 40.968 By MS/MS 1 2523800 2523800 0 2340 1338 2518 5331 4444 4444 175 1759;3678;3679 1 QDVYGPQPQVR EGYRAPSRQDVYGPQP YGPQPQVRVGGSSVDL R Q D V R V 0 1 0 1 0 3 0 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 11 0 1285.6415 C9JZR2;O60716;E9PRE2 C9JZR2 254 264 CTNND1 Catenin delta-1 yes no 2;3 0.00073928 96.665 By MS/MS By MS/MS 2 1 79367000 38617000 40749000 2341 495 2519 5332;5333;5334 4445;4446;4447 4447 4120 3 QEAGGLGISIK VRRVRVVKQEAGGLGI GGLGISIKGGRENRMP K Q E I K G 1 0 0 0 0 1 1 3 0 2 1 1 0 0 0 1 0 0 0 0 0 0 11 0 1071.5924 A0A140TA73;Q13425 A0A140TA73 121 131 SNTB2 Beta-2-syntrophin yes no 2 0.0039611 77.288 By MS/MS By matching 1 1 1770100 873090 896990 2342 285 2520 5335;5336 4448 4448 404 1 QEAIPDLEDSPPVSDSEEQQESAR ESKKTAPRQEAIPDLE EEQQESARAVPEKSTA R Q E A R A 2 1 0 3 0 3 5 0 0 1 1 0 0 0 3 4 0 0 0 1 0 0 24 0 2655.1784 Q9BTC0 Q9BTC0 796 819 DIDO1 Death-inducer obliterator 1 yes yes 3 0.0070266 44.415 By MS/MS By matching 1 1 8482200 3661200 4821000 2343 1959 2521 5337;5338 4449 4449 2771;2772;2773 1 QEDGGVYSSSGLK ISDFGMSRQEDGGVYS VYSSSGLKQIPIKWTA R Q E L K Q 0 0 0 1 0 1 1 3 0 0 1 1 0 0 0 3 0 0 1 1 0 0 13 0 1325.6099 W0S4B9;P16591 W0S4B9 297 309 Pe1Fe10;FER Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Fer yes no 2 0.0050839 59.265 By MS/MS By MS/MS 1 1 5008500 2598200 2410400 2344 1278 2522 5339;5340 4450;4451 4450 4270 2 QEKPAEKPAETPVATSPTATDSTSGDSSR PAPASAAKQEKPAEKP STSGDSSRSNLFEDAT K Q E S R S 4 1 0 2 0 1 3 1 0 0 0 2 0 0 4 5 5 0 0 1 0 0 29 2 2944.3898 H0Y579;P54727 H0Y579 15 43 RAD23B UV excision repair protein RAD23 homolog B yes no 4 0.00015184 57.299 By MS/MS By MS/MS 1 1 27559000 16016000 11543000 2345 833 2523 5341;5342 4452;4453 4453 1122;3508 2 QELGSPEER RNFEDRERQELGSPEE ELGSPEERLQDSSDPD R Q E E R L 0 1 0 0 0 1 3 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 9 0 1043.4884 V9GYM8;Q92974;V9GYF0 V9GYM8 973 981 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.0098291 77.674 By matching By MS/MS 1 1 1437900 688420 749460 2346 1870 2524 5343;5344 4454 4454 2644 1 QEPCAQHNGSEPASPKR GSIPAGPKQEPCAQHN SEPASPKRERPTSPAP K Q E K R E 2 1 1 0 1 2 2 1 1 0 0 1 0 0 3 2 0 0 0 0 0 0 17 1 1891.8595 M0QZ09;Q8N6T7 M0QZ09 243 259 SIRT6 NAD-dependent protein deacetylase sirtuin-6 yes no 3 0.0019098 56.872 By MS/MS By matching 1 1 3481800 1678000 1803800 2347 1065 2525 5345;5346 4455 4455 1401 1 QEPSQGTTTFAVTSILR KYLTWASRQEPSQGTT FAVTSILRVAAEDWKK R Q E L R V 1 1 0 0 0 2 1 1 0 1 1 0 0 1 1 2 4 0 0 1 0 0 17 0 1834.9425 P01876;A0A0G2JMB2 P01876 283 299 IGHA1 Ig alpha-1 chain C region yes no 2 0.00041763 93.011 By MS/MS By MS/MS 1 1 2939200 1952000 987230 2348 1210 2526 5347;5348 4456;4457 4456 2 QEQINTEPLEDTVLSPTK EPEDKTVKQEQINTEP DTVLSPTKKRKRQKGT K Q E T K K 0 0 1 1 0 2 3 0 0 1 2 1 0 0 2 1 3 0 0 1 0 0 18 0 2041.0215 O15446 O15446 271 288 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 2 0.0024818 69.111 By MS/MS 1 7489200 0 7489200 2349 1112 2527 5349 4458 4458 1481;3602;3603 1 QEQINTEPLEDTVLSPTKK EPEDKTVKQEQINTEP TVLSPTKKRKRQKGTE K Q E K K R 0 0 1 1 0 2 3 0 0 1 2 2 0 0 2 1 3 0 0 1 0 0 19 1 2169.1165 O15446 O15446 271 289 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 3 0.010569 43.794 By MS/MS By matching 1 1 2440200 1176000 1264200 2350 1112 2528 5350;5351 4459 4459 1481;3602;3603 1 QEQKGSVGATFKLGDSLSNPNER VKKKKHDKQEQKGSVG SLSNPNERAIVKEKMV K Q E E R A 1 1 2 1 0 2 2 3 0 0 2 2 0 1 1 3 1 0 0 1 0 0 23 2 2461.2197 Q9HCM1 Q9HCM1 1395 1417 KIAA1551 Uncharacterized protein KIAA1551 yes yes 3 0.017885 41.257 By matching By MS/MS 1 1 2855300 1526000 1329300 2351 2033 2529 5352;5353 4460 4460 2904;2905 1 QERLSPEVAPPAHR LPAGVVVKQERLSPEV EVAPPAHRRPDHSGGS K Q E H R R 2 2 0 0 0 1 2 0 1 0 1 0 0 0 3 1 0 0 0 1 0 0 14 1 1585.8325 Q8TAD8 Q8TAD8 31 44 SNIP1 Smad nuclear-interacting protein 1 yes yes 3 1.9817E-06 103.66 By MS/MS By MS/MS 1 1 17125000 8138000 8987000 2352 1811 2530 5354;5355 4461;4462 4462 2553 2 QESDPEDDDVKKPALQSSVVATSK RRTRRESRQESDPEDD SSVVATSKERTRRDLI R Q E S K E 2 0 0 4 0 2 2 0 0 0 1 3 0 0 2 4 1 0 0 3 0 0 24 2 2572.2504 Q9H307 Q9H307 98 121 PNN Pinin yes yes 4 0.00022043 67.668 By matching By MS/MS 1 1 6698000 3257900 3440100 2353 2001 2531 5356;5357 4463 4463 2863 1 QESLESVALFQAPPK Q E P K 2 0 0 0 0 2 2 0 0 0 2 1 0 1 2 2 0 0 0 1 0 0 15 0 1642.8566 REV__H3BUB6 yes yes 2 0.021362 49.35 By MS/MS By matching 2 1 16368000 10144000 6224000 + 2354 2201 2532 5358;5359;5360 4464 4464 3187 1 QEVAPVQYNIVEQNK WKPLGQQKQEVAPVQY YNIVEQNKLNKDYRAN K Q E N K L 1 0 2 0 0 3 2 0 0 1 0 1 0 0 1 0 0 0 1 3 0 0 15 0 1757.8948 A0A087WZ85;A0A0A0MSX4;A0A087WTM1;Q9Y6N7 A0A087WZ85 981 995 ROBO1 Roundabout homolog 1 yes no 2;3 0.00079179 70.685 By MS/MS By MS/MS 1 2 5379300 2696400 2682900 2355 28 2533 5361;5362;5363 4465;4466;4467 4466 4000 3 QEVAPVQYNIVEQNKLNKDYR WKPLGQQKQEVAPVQY NKLNKDYRANDTVPPT K Q E Y R A 1 1 3 1 0 3 2 0 0 1 1 2 0 0 1 0 0 0 2 3 0 0 21 2 2547.3082 A0A087WZ85;A0A0A0MSX4;A0A087WTM1;Q9Y6N7 A0A087WZ85 981 1001 ROBO1 Roundabout homolog 1 yes no 3 0.0038324 47.016 By MS/MS By matching 1 1 6842200 3480400 3361700 2356 28 2534 5364;5365 4468 4468 4000;4001 1 QEYDESGPSIVHR FQQMWISKQEYDESGP SGPSIVHRKCF_____ K Q E H R K 0 1 0 1 0 1 2 1 1 1 0 0 0 0 1 2 0 0 1 1 0 0 13 0 1515.6954 P63261;P60709;Q6S8J3;A5A3E0;P0CG38;Q9BYX7;P0CG39 P63261 360 372 ACTG1;ACTB;POTEE;POTEF;POTEI;POTEKP;POTEJ Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J yes no 3 0.0085374 59.155 By MS/MS By matching 1 1 2510100 1343300 1166800 2357 1422 2535 5366;5367 4469 4469 1 QFLICSICLER PVVRQIDKQFLICSIC ICSICLERYKNPKVLP K Q F E R Y 0 1 0 0 2 1 1 0 0 2 2 0 0 1 0 1 0 0 0 0 0 0 11 0 1437.7108 A0A0J9YXY2;A0A0J9YW70;C9JVI3;A0A0J9YX34;Q9C040 A0A0J9YXY2 19 29 TRIM2 Tripartite motif-containing protein 2 yes no 2 0.0082672 64.945 By MS/MS 1 9472100 9472100 0 2358 251 2536 5368 4470 4470 363 1 QFPPSPSAPK KGLLLNRRQFPPSPSA PPSPSAPKIPSWQIPV R Q F P K I 1 0 0 0 0 1 0 0 0 0 0 1 0 1 4 2 0 0 0 0 0 0 10 0 1054.5447 O75381 O75381 228 237 PEX14 Peroxisomal membrane protein PEX14 yes yes 2 0.0068712 72.34 By MS/MS 1 4044500 0 4044500 2359 1160 2537 5369 4471 4471 1546 1 QFQEAIIVFQEEFK SATGESEKQFQEAIIV IVFQEEFKCCGLVNGA K Q F F K C 1 0 0 0 0 3 3 0 0 2 0 1 0 3 0 0 0 0 0 1 0 0 14 0 1754.8879 P19075 P19075 137 150 TSPAN8 Tetraspanin-8 yes yes 2 3.3703E-60 161.93 By MS/MS By MS/MS 1 1 15583000 6376500 9206200 2360 1292 2538 5370;5371 4472;4473 4472 2 QFSLENVQEGEILHDAK SEERHTKKQFSLENVQ GEILHDAKTLAGNVIA K Q F A K T 1 0 1 1 0 2 3 1 1 1 2 1 0 1 0 1 0 0 0 1 0 0 17 0 1955.9589 O75113 O75113 298 314 N4BP1 NEDD4-binding protein 1 yes yes 3 0.022064 42.095 By MS/MS 1 688020 688020 0 2361 1151 2539 5372 4474 4474 1535 1 QFSTASDHEQPGVSG KDQKKVERQFSTASDH HEQPGVSG________ R Q F S G - 1 0 0 1 0 2 1 2 1 0 0 0 0 1 1 3 1 0 0 1 0 0 15 0 1545.6696 G3V133;Q66K14 G3V133 395 409 TBC1D9B TBC1 domain family member 9B yes no 2 0.00011715 84.62 By MS/MS By matching 1 1 13597000 6968500 6628300 2362 778 2540 5373;5374 4475 4475 1037 1 QGQSQAASSSSVTSPIK AQVEQQHKQGQSQAAS SSVTSPIKMKIPIANT K Q G I K M 2 0 0 0 0 3 0 1 0 1 0 1 0 0 1 6 1 0 0 1 0 0 17 0 1661.822 O60583 O60583 467 483 CCNT2 Cyclin-T2 yes yes 2 0.0046188 82.942 By MS/MS By MS/MS 1 1 8904900 4320000 4584900 2363 1141 2541 5375;5376 4476;4477 4477 1518;1519;3613 2 QGSFSEDVISHK TLPSLLKRQGSFSEDV SEDVISHKGDLRFVTI R Q G H K G 0 0 0 1 0 1 1 1 1 1 0 1 0 1 0 3 0 0 0 1 0 0 12 0 1332.631 H0Y390;H3BPE1;H3BQK9;Q9UPN3;E9PNZ4 H0Y390 992 1003 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 0.0046009 70.622 By matching By MS/MS 1 1 1738900 688890 1050000 2364 818 2542 5377;5378 4478 4478 1099 1 QGSGRESPSLASR EKHSAVQRQGSGRESP ESPSLASREGKYIPLP R Q G S R E 1 2 0 0 0 1 1 2 0 0 1 0 0 0 1 4 0 0 0 0 0 0 13 1 1330.6589 H3BUF6;Q8WWM7;H3BSK9 H3BUF6 333 345 ATXN2L Ataxin-2-like protein yes no 2;3 0.00084608 97.223 By MS/MS By MS/MS 1 2 16065000 7562500 8502200 2365 935 2543 5379;5380;5381 4479;4480;4481 4479 1256 3 QGSGVILR IEPVSRSRQGSGVILR QGSGVILRQEEECYTL R Q G L R Q 0 1 0 0 0 1 0 2 0 1 1 0 0 0 0 1 0 0 0 1 0 0 8 0 828.48175 I3L297;P46108 I3L297 123 130 CRK Adapter molecule crk yes no 2 0.0096378 85.862 By MS/MS By matching 1 1 3514700 1578200 1936600 2366 985 2544 5382;5383 4482 4482 1322 1 QGSPDQVSPVSEMTSTSLYQDKQEGK PFEEKSGKQGSPDQVS YQDKQEGKSTDFAPIK K Q G G K S 0 0 0 2 0 4 2 2 0 0 1 2 1 0 2 5 2 0 1 2 0 0 26 1 2825.3025 P46821 P46821 1436 1461 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.013381 41.911 By MS/MS By matching 1 1 5804500 3281600 2522900 2367 1367 2545 5384;5385 4483 4483 1808 1 QGSPVAAGAPAK FGSRGQPRQGSPVAAG VAAGAPAKQQQVDIPL R Q G A K Q 4 0 0 0 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 12 0 1052.5615 Q9NZI8 Q9NZI8 179 190 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 7.6422E-133 193.15 By MS/MS By MS/MS 1 1 149620000 75020000 74602000 2368 2077 2546 5386;5387 4484;4485;4486;4487;4488;4489;4490 4485 2985 7 QGSPVAAGAPAKQQQVDIPLR FGSRGQPRQGSPVAAG QQVDIPLRLLVPTQYV R Q G L R L 4 1 0 1 0 4 0 2 0 1 1 1 0 0 3 1 0 0 0 2 0 0 21 1 2130.1546 Q9NZI8 Q9NZI8 179 199 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 3 0.00076474 86.213 By MS/MS By MS/MS 1 1 88485000 52036000 36449000 2369 2077 2547 5388;5389 4491;4492 4491 2985 2 QGVYENFR SSTGDAARQGVYENFR QGVYENFRRELEMSTT R Q G F R R 0 1 1 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 0 8 0 1011.4774 Q13009 Q13009 381 388 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 yes yes 2 0.0027291 101.33 By MS/MS By MS/MS 1 1 2395500 1024400 1371100 2370 1486 2548 5390;5391 4493;4494 4493 4342 2 QHTVFPAKGSR NLLTSSSKQHTVFPAK VFPAKGSRDKP_____ K Q H S R D 1 1 0 0 0 1 0 1 1 0 0 1 0 1 1 1 1 0 0 1 0 0 11 1 1226.652 F8WDE7;C9K0V9;Q9ULK2 F8WDE7 55 65 ATXN7L1 Ataxin-7-like protein 1 yes no 2 0.022452 51.092 By MS/MS 1 0 0 0 2371 497 2549 5392 4495 4495 687;3379 1 QIFQADVAMGAETRKR SSRNKFIKQIFQADVA MGAETRKRSPTLSSQF K Q I K R S 3 2 0 1 0 2 1 1 0 1 0 1 1 1 0 0 1 0 0 1 0 0 16 2 1819.9363 B9A012;A0A087WT71;Q13402 B9A012 591 606 MYO7A Unconventional myosin-VIIa yes no 3 0.019713 40.801 By MS/MS 1 384340 384340 0 2372 23 2550 5393 4496 4496 7 3212 0 QILIACSPVSSVR ILRVTRRRQILIACSP CSPVSSVRKKPKVTPT R Q I V R K 1 1 0 0 1 1 0 0 0 2 1 0 0 0 1 3 0 0 0 2 0 0 13 0 1428.7759 J3KP30;Q5QJE6;E9PRB3 J3KP30 111 123 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 0.00043791 85.909 By MS/MS By MS/MS 1 1 24845000 12608000 12237000 2373 1003 2551 5394;5395 4497;4498 4498 1339 2 QISLPDLSQEEPQLK FFEKAPSRQISLPDLS SQEEPQLKTPALANEE R Q I L K T 0 0 0 1 0 3 2 0 0 1 3 1 0 0 2 2 0 0 0 0 0 0 15 0 1723.8992 H0YBZ4;Q15390 H0YBZ4 75 89 MTFR1 Mitochondrial fission regulator 1 yes no 2 0.0018806 69.92 By MS/MS By MS/MS 1 1 4258800 2096500 2162300 2374 870 2552 5396;5397 4499;4500 4499 1168 2 QISQDVK ERRQRLERQISQDVKL RQISQDVKLEPDILLR R Q I V K L 0 0 0 1 0 2 0 0 0 1 0 1 0 0 0 1 0 0 0 1 0 0 7 0 816.43413 E9PJF6;H0YCL9;H0Y360;Q01433;E9PIJ1 E9PJF6 85 91 AMPD2 AMP deaminase 2 yes no 2 0.018249 91.265 By matching By MS/MS 1 1 2930200 1368900 1561300 2375 649 2553 5398;5399 4501 4501 879 1 QITTSPITVR DSGDKEKKQITTSPIT TTSPITVRKNKKDEER K Q I V R K 0 1 0 0 0 1 0 0 0 2 0 0 0 0 1 1 3 0 0 1 0 0 10 0 1114.6346 O95835 O95835 609 618 LATS1 Serine/threonine-protein kinase LATS1 yes yes 2 0.0094437 65.695 By MS/MS 1 6324500 6324500 0 2376 1200 2554 5400 4502 4502 1606 1 QITVNDLPVGR IDDKGILRQITVNDLP VNDLPVGRSVDETLRL R Q I G R S 0 1 1 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1210.667 A0A0A0MRQ5;A0A0A0MSI0;Q06830;P32119 A0A0A0MRQ5 39 49 PRDX1;PRDX2 Peroxiredoxin-1;Peroxiredoxin-2 yes no 2 0.0038559 82.287 By matching By MS/MS 1 1 1144900 464380 680510 2377 150 2555 5401;5402 4503 4503 1 QIVGTPVNSEDSDTR KIVPGNEKQIVGTPVN NSEDSDTRQTSHLQAR K Q I T R Q 0 1 1 2 0 1 1 1 0 1 0 0 0 0 1 2 2 0 0 2 0 0 15 0 1616.7642 J3KP30;Q5QJE6 J3KP30 228 242 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 5.1396E-05 96.208 By MS/MS By MS/MS 1 1 5726100 3145300 2580800 2378 1003 2556 5403;5404 4504;4505 4505 3559 2 QIYLSENPEETAAR CTINNISKQIYLSENP NPEETAARVNQSALEA K Q I A R V 2 1 1 0 0 1 3 0 0 1 1 0 0 0 1 1 1 0 1 0 0 0 14 0 1619.7791 Q9UKG1 Q9UKG1 376 389 APPL1 DCC-interacting protein 13-alpha yes yes 2 0.0024936 63.727 By MS/MS By MS/MS 1 1 2754900 1166100 1588900 2379 2108 2557 5405;5406 4506;4507 4506 4457 2 QKEDVEVVGGSDGEGAIGLSSDPK KDLETRKKQKEDVEVV IGLSSDPKSREQMIND K Q K P K S 1 0 0 3 0 1 3 5 0 1 1 2 0 0 1 3 0 0 0 3 0 0 24 1 2372.1343 Q8NHZ8 Q8NHZ8 32 55 CDC26 Anaphase-promoting complex subunit CDC26 yes yes 3 0.0023989 55.844 By MS/MS 1 2709100 2709100 0 2380 1809 2558 5407 4508 4508 2549 1 QKFNDSEGDDTEETEDYR FSDKESGKQKFNDSEG TEETEDYRQFRKSVLA K Q K Y R Q 0 1 1 4 0 1 4 1 0 0 0 1 0 1 0 1 2 0 1 0 0 0 18 1 2176.8669 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 392 409 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 4.1306E-06 97.352 By MS/MS By MS/MS 1 1 77688000 45712000 31975000 2381 2073 2559 5408;5409 4509;4510 4509 2973 2 QKKAHLMEIQVNGGTVAEK QMRLLPLRQKKAHLME NGGTVAEKLDWARERL R Q K E K L 2 0 1 0 0 2 2 2 1 1 1 3 1 0 0 0 1 0 0 2 0 0 19 2 2080.1099 H7C3M2;B5MCW2;H7C422;G5E9G0;P39023 H7C3M2 207 225 RPL3 60S ribosomal protein L3 yes no 2 0.00019003 92.952 By MS/MS By MS/MS 3 2 638510000 613630000 24881000 2382 393 2560;2561 5410;5411;5412;5413;5414 4511;4512;4513 4511 361;362 3347 3 QKQEPKTPVAPK PGAPDKDKQKQEPKTP PKTPVAPKKDLKIKNM K Q K P K K 1 0 0 0 0 2 1 0 0 0 0 3 0 0 3 0 1 0 0 1 0 0 12 2 1349.7667 O60885 O60885 1180 1191 BRD4 Bromodomain-containing protein 4 yes yes 3 0.015972 42.21 By MS/MS 1 0 0 0 2383 1149 2562 5415 4514 4514 3617 1 QKSDAEEDGGTVSQEEEDR GEEKLEEKQKSDAEED VSQEEEDRKPKAEEDE K Q K D R K 1 1 0 3 0 2 5 2 0 0 0 1 0 0 0 2 1 0 0 1 0 0 19 1 2107.8778 P27824 P27824 552 570 CANX Calnexin yes yes 3 0.0026058 64.331 By MS/MS By MS/MS 1 2 8404900 3444500 4960400 2384 1316 2563 5416;5417;5418 4515;4516 4516 1734 2 QKSPEIHR ATEEHSTRQKSPEIHR QKSPEIHRRIDISPST R Q K H R R 0 1 0 0 0 1 1 0 1 1 0 1 0 0 1 1 0 0 0 0 0 0 8 1 993.53558 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09 Q9NYF8 646 653 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0048903 94.409 By MS/MS By MS/MS 1 1 131360000 58388000 72968000 2385 2073 2564 5419;5420 4517;4518;4519;4520 4518 2974 4 QKSYTLVVAK FIPPWLKKQKSYTLVV SYTLVVAKDGGDKKEP K Q K A K D 1 0 0 0 0 1 0 0 0 0 1 2 0 0 0 1 1 0 1 2 0 0 10 1 1135.6601 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 85 94 EPB41L2 Band 4.1-like protein 2 yes no 2;3 0.0078625 84.188 By MS/MS By MS/MS 2 2 37844000 17653000 20192000 2386 1125 2565 5421;5422;5423;5424 4521;4522;4523 4522 1498;4241 3 QKYFELEVR EQLSFRERQKYFELEV KYFELEVRVPQAEGPP R Q K V R V 0 1 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 0 1 1 0 0 9 1 1210.6346 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1277 1285 SCRIB Protein scribble homolog yes no 2 0.020499 64.654 By MS/MS By matching 1 1 6253400 3055100 3198300 2387 245 2566 5425;5426 4524 4524 4044 1 QLAEGTAQQR EQELEKQRQLAEGTAQ AEGTAQQRLAAEQELI R Q L Q R L 2 1 0 0 0 3 1 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 10 0 1100.5574 Q15149 Q15149 1836 1845 PLEC Plectin yes yes 2 0.0016674 95.815 By MS/MS 1 64118000 0 64118000 2388 1546 2567 5427 4525 4525 418;419 1 QLARELTQLQEAER Q L E R 2 2 0 0 0 3 3 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 14 1 1683.8904 REV__Q6ZRS4 yes no 2 0.022465 40.727 By MS/MS 1 771570 0 771570 + 2389 2181 2568 5428 4526 4526 3989 0 QLEEPGAGTPSPVR SGSGMPSRQLEEPGAG AGTPSPVRLHALAGFQ R Q L V R L 1 1 0 0 0 1 2 2 0 0 1 0 0 0 3 1 1 0 0 1 0 0 14 0 1436.726 Q63ZY6;Q96P11 Q63ZY6 133 146 NSUN5P2;NSUN5 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 2 0.00019859 95.755 By MS/MS 1 1975700 1975700 0 2390 1660 2569 5429 4527 4527 2320 1 QLERHQELLCSVK GKMFTVHKQLERHQEL QELLCSVKPFICHVCN K Q L V K P 0 1 0 0 1 2 2 0 1 0 3 1 0 0 0 1 0 0 0 1 0 0 13 1 1638.8512 Q9ULJ3 Q9ULJ3 923 935 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 3 0.011747 55.213 By MS/MS 1 0 0 0 2391 2119 2570 5430 4528 4528 459 3035 1 QLHLEGASLELSDDDTESK SSSRSGRRQLHLEGAS SDDDTESKTSDVNETQ R Q L S K T 1 0 0 3 0 1 3 1 1 0 4 1 0 0 0 3 1 0 0 0 0 0 19 0 2085.9702 P35580 P35580 1945 1963 MYH10 Myosin-10 yes yes 2;3 0.0015425 82.774 By MS/MS By MS/MS 2 4 28366000 6134200 22231000 2392 1341 2571;2572 5431;5432;5433;5434;5435;5436 4529;4530;4531;4532;4533;4534 4534 1764;1765 6 QLHLEGASLELSDDDTESKTSDVNETQPPQSE SSSRSGRRQLHLEGAS ETQPPQSE________ R Q L S E - 1 0 1 4 0 3 5 1 1 0 4 1 0 0 2 5 3 0 0 1 0 0 32 1 3498.5758 P35580 P35580 1945 1976 MYH10 Myosin-10 yes yes 3 6.3625E-08 62.858 By MS/MS By matching 1 1 48843000 24713000 24130000 2393 1341 2573 5437;5438 4535 4535 1764;1765 1 QLIVGVNK LAYTLGVKQLIVGVNK QLIVGVNKMDSTEPPY K Q L N K M 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 2 0 0 8 0 869.53345 Q5VTE0;P68104;A0A087WV01 Q5VTE0 147 154 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha no no 2 0.018272 81.381 By MS/MS By matching 1 1 1850300 636820 1213500 2394 1438 2574 5439;5440 4536 4536 1 QLLDSDEEQEEDEGR LKAAPKKRQLLDSDEE EQEEDEGRNRAPELGA R Q L G R N 0 1 0 3 0 2 5 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 15 0 1790.7442 Q9UNS1 Q9UNS1 1169 1183 TIMELESS Protein timeless homolog yes yes 2 0.0030704 65.395 By matching By MS/MS 1 1 32347000 15300000 17047000 2395 2129 2575 5441;5442 4537 4537 3055 1 QLLGQDAWTSQK VPNEDRIKQLLGQDAW QDAWTSQKSELAGFYP K Q L Q K S 1 0 0 1 0 3 0 1 0 0 2 1 0 0 0 1 1 1 0 0 0 0 12 0 1373.6939 E9PRM2;Q9P2H5 E9PRM2 167 178 USP35 Ubiquitin carboxyl-terminal hydrolase 35 yes no 2 0.014291 48.998 By MS/MS 1 0 0 0 2396 680 2576 5443 4538 4538 919;3455 1 QLLLQQQTSGLKSPK QQALQAARQLLLQQQT TSGLKSPKSSDKQRPL R Q L P K S 0 0 0 0 0 4 0 1 0 0 4 2 0 0 1 2 1 0 0 0 0 0 15 1 1667.957 A0A0U1RQE0;A8MUV4;A0A0U1RQR8;A0A0U1RQY3;A0A0U1RQM2;O15409;C9JQP8;Q8N6B5 A0A0U1RQE0 63 77 FOXP2 Forkhead box protein P2 yes no 3 0.0016444 66.215 By MS/MS 1 1219100 0 1219100 2397 260 2577 5444 4539 4539 375 1 QLLLTADDR EENRRFYRQLLLTADD LLLTADDRVNPCIGGV R Q L D R V 1 1 0 2 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1043.5611 H3BQN4;J3KPS3;P04075;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 H3BQN4 61 69 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.015966 69.812 By matching By MS/MS 1 1 1670500 650020 1020500 2398 921 2578 5445;5446 4540 4540 1 QLLNSAVIAQQRRK VKDIAPEKQLLNSAVI VIAQQRRKPDPPKDEN K Q L R K P 2 2 1 0 0 3 0 0 0 1 2 1 0 0 0 1 0 0 0 1 0 0 14 2 1623.9533 Q96QB1 Q96QB1 224 237 DLC1 Rho GTPase-activating protein 7 yes yes 3 0.0035088 59.57 By MS/MS By matching 1 1 557940 318280 239660 2399 1922 2579 5447;5448 4541 4541 441;442 1 QLLTLSSELSQAR EKNERVQRQLLTLSSE SSELSQARDENKRTHN R Q L A R D 1 1 0 0 0 2 1 0 0 0 4 0 0 0 0 3 1 0 0 0 0 0 13 0 1444.7886 E7EQR4;P15311 E7EQR4 530 542 EZR Ezrin yes no 2 0.0064285 64.798 By MS/MS By matching 1 1 3459300 1831600 1627700 2400 574 2580 5449;5450 4542 4542 762 1 QLPSPEPCEIQK RGIIVDARQLPSPEPC PEPCEIQKNLNDNEML R Q L Q K N 0 0 0 0 1 2 2 0 0 1 1 1 0 0 3 1 0 0 0 0 0 0 12 0 1424.697 Q5VVJ2 Q5VVJ2 337 348 MYSM1 Histone H2A deubiquitinase MYSM1 yes yes 2 0.0056316 68.463 By MS/MS By MS/MS 1 1 5764800 2978300 2786400 2401 1650 2581 5451;5452 4543;4544 4544 2308 2 QLQALSSELAQAR QKNERVKKQLQALSSE SSELAQARDETKKTQN K Q L A R D 3 1 0 0 0 3 1 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 13 0 1413.7576 P35241 P35241 527 539 RDX Radixin yes yes 2 0.00064934 77.633 By MS/MS By MS/MS 1 1 2810500 1379100 1431500 2402 1337 2582 5453;5454 4545;4546;4547 4547 1756 3 QLQASPGLGAGATR RGGDSAVRQLQASPGL GLGAGATRSGVGTGPP R Q L T R S 3 1 0 0 0 2 0 3 0 0 2 0 0 0 1 1 1 0 0 0 0 0 14 0 1325.7052 Q92630 Q92630 26 39 DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 2 yes yes 2 0.0049897 64.374 By MS/MS By matching 1 1 2269700 960900 1308800 2403 1856 2583 5455;5456 4548 4548 2619 1 QLQVLDNRLGRETGR CPNSGFLRQLQVLDNR RLGRETGRF_______ R Q L G R F 0 3 1 1 0 2 1 2 0 0 3 0 0 0 0 0 1 0 0 1 0 0 15 2 1753.9547 E9PSD4;U3KQA1;U3KQ82;Q9UII6 E9PSD4 132 146 DUSP13 Dual specificity protein phosphatase 13 isoform B yes no 2 0.017707 41.689 By matching By MS/MS 1 1 1106900 525080 581780 2404 682 2584 5457;5458 4549 4549 102 3457 1 QLQVLISSNEVK YPTKAGPRQLQVLISS LISSNEVKEIKGYKDI R Q L V K E 0 0 1 0 0 2 1 0 0 1 2 1 0 0 0 2 0 0 0 2 0 0 12 0 1356.7613 Q96PF1 Q96PF1 683 694 TGM7 Protein-glutamine gamma-glutamyltransferase Z yes yes 2 0.013506 51.218 By MS/MS 1 0 0 0 2405 1916 2585 5459 4550 4550 268 2710;2711 1 QLSADSAEAHSLNVNR YGHRPLSKQLSADSAE AHSLNVNRFSPANYDQ K Q L N R F 3 1 2 1 0 1 1 0 1 0 2 0 0 0 0 3 0 0 0 1 0 0 16 0 1710.8285 J3KPC8;H0Y4E8;Q9Y2K2 J3KPC8 864 879 SIK3 Serine/threonine-protein kinase SIK3 yes no 3 0.021092 43.042 By MS/MS 1 2301500 0 2301500 2406 825 2586 5460 4551 4551 1108 1 QLSESESSLEMDDER ERREALCRQLSESESS SLEMDDERYFNEMSAQ R Q L E R Y 0 1 0 2 0 1 4 0 0 0 2 0 1 0 0 4 0 0 0 0 0 0 15 0 1753.7312 Q16204 Q16204 321 335 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 0.00057082 74.326 By matching By MS/MS 2 2 15303000 7135000 8167700 2407 1572 2587;2588 5461;5462;5463;5464 4552;4553 4553 224 2170;2171 2 QLSLEGSGLGVEDLK STKYDVFRQLSLEGSG GLGVEDLKDNTPSGKS R Q L L K D 0 0 0 1 0 1 2 3 0 0 4 1 0 0 0 2 0 0 0 1 0 0 15 0 1543.8094 Q9UMZ2 Q9UMZ2 750 764 SYNRG Synergin gamma yes yes 2 0.0043405 61.419 By MS/MS By matching 1 1 3706600 1654800 2051800 2408 2127 2589 5465;5466 4554 4554 3051 1 QLSLEGSGLGVEDLKDNTPSGK STKYDVFRQLSLEGSG KDNTPSGKSDDDFADF R Q L G K S 0 0 1 2 0 1 2 4 0 0 4 2 0 0 1 3 1 0 0 1 0 0 22 1 2243.1281 Q9UMZ2 Q9UMZ2 750 771 SYNRG Synergin gamma yes yes 3 1.4285E-36 121.56 By matching By MS/MS 1 1 6790900 1955400 4835500 2409 2127 2590 5467;5468 4555 4555 3051 1 QLSMSSADSADAKR SWDPRRQRQLSMSSAD ADSADAKRTREEGKDW R Q L K R T 3 1 0 2 0 1 0 0 0 0 1 1 1 0 0 4 0 0 0 0 0 0 14 1 1465.6831 Q5JSZ5 Q5JSZ5 414 427 PRRC2B Protein PRRC2B yes yes 3 0.0085688 48.608 By MS/MS By matching 1 1 1161900 667310 494600 2410 1607 2591 5469;5470 4556 4556 2234 1 QLSMTLR DRMKKIKRQLSMTLRG RQLSMTLRGGRGIDKT R Q L L R G 0 1 0 0 0 1 0 0 0 0 2 0 1 0 0 1 1 0 0 0 0 0 7 0 847.45857 E5RJM2;E5RGN0;A0A087WZU2;Q00536;E5RIY8;E5RIU4;E5RJQ8;E5RGV7 E5RJM2 10 16 CDK16 Cyclin-dependent kinase 16 yes no 2 0.0088728 83.998 By MS/MS 1 0 0 0 2411 92 2592 5471 4557 4557 12 3239 1 QLSPATQLAIQR VLVPAYAKQLSPATQL ATQLAIQRATPETGPE K Q L Q R A 2 1 0 0 0 3 0 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 12 0 1324.7463 G5E9D9;A0A0C4DFZ6;Q9H972 G5E9D9 42 53 C14orf93 Uncharacterized protein C14orf93 yes no 2 0.018152 55.353 By MS/MS 1 342860 342860 0 2412 201 2593 5472 4558 4558 290 1 QLWMSLGGTWMK YTVNGDERQLWMSLGG SLGGTWMKARAEWPKE R Q L M K A 0 0 0 0 0 1 0 2 0 0 2 1 2 0 0 1 1 2 0 0 0 0 12 0 1436.6945 Q12929 Q12929 404 415 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 3 0.012511 55.196 By MS/MS 1 834900 0 834900 2413 1484 2594 5473 4559 4559 414 207 2022 0 QLYSCIALK EIREELEKQLYSCIAL LYSCIALKVTANQMEM K Q L L K V 1 0 0 0 1 1 0 0 0 1 2 1 0 0 0 1 0 0 1 0 0 0 9 0 1094.5794 A0A087WZK6;A0A087X2C2;A0A087WZ97;Q5T7M9 A0A087WZK6 330 338 FAM69A Protein FAM69A yes no 2 0.016626 51.927 By MS/MS 1 749720 0 749720 2414 88 2595 5474 4560 4560 109;4015 1 QMKLLQQQNDITGLSRQVK LENVTKERQMKLLQQQ TGLSRQVKHVMNFTNW R Q M V K H 0 1 1 1 0 5 0 1 0 1 3 2 1 0 0 1 1 0 0 1 0 0 19 2 2227.2107 H0Y612;Q9UPN9 H0Y612 129 147 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 3 0.01828 42.647 By MS/MS By matching 1 1 1855100 934120 920970 2415 835 2596 5475;5476 4561 4561 1125 0 QNDPVSKLLNNLDSK Q N S K 0 0 3 2 0 1 0 0 0 0 3 2 0 0 1 2 0 0 0 1 0 0 15 1 1683.8792 REV__Q6Q759 yes yes 3 0.0015009 67.234 By matching By MS/MS 1 2 88769000 40370000 48399000 + 2416 2208 2597 5477;5478;5479 4562 4562 3195 1 QNDTPKGPQPPTVSPIR FEKAAFQKQNDTPKGP PPTVSPIRSSRPPPAK K Q N I R S 0 1 1 1 0 2 0 1 0 1 0 1 0 0 5 1 2 0 0 1 0 0 17 1 1830.9588 P46087 P46087 773 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2;3 0.0045674 62.648 By MS/MS By MS/MS 1 2 3522800 1601500 1921300 2417 1363 2598 5480;5481;5482 4563;4564 4564 1794;3690 1 QNGSNDSDRYSDNEEDSKIELK SSSAENTRQNGSNDSD EDSKIELKLEKREPLK R Q N L K L 0 1 3 4 0 1 3 1 0 1 1 2 0 0 0 4 0 0 1 0 0 0 22 2 2542.1055 G5E972;P42167;H0YJH7 G5E972 174 195 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3;4 3.1362E-52 137.52 By MS/MS By MS/MS 8 7 576780000 286270000 290510000 2418 808 2599;2600;2601 5483;5484;5485;5486;5487;5488;5489;5490;5491;5492;5493;5494;5495;5496;5497 4565;4566;4567;4568;4569;4570;4571;4572;4573;4574;4575;4576 4571 121;122;390 1077;1078;1079;4172 12 QNLLSVGDYRHR PRIKKDEKQNLLSVGD SVGDYRHRRTEQEEDE K Q N H R R 0 2 1 1 0 1 0 1 1 0 2 0 0 0 0 1 0 0 1 1 0 0 12 1 1456.7535 O60264 O60264 133 144 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 3 0.017027 43.628 By MS/MS By matching 1 1 2053700 1182700 870990 2419 1133 2602 5498;5499 4577 4577 154 1507;4245 0 QNNFSLAMK KMIDSARKQNNFSLAM NNFSLAMKLLKELHKE K Q N M K L 1 0 2 0 0 1 0 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 9 0 1051.5121 P78527 P78527 3249 3257 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0092932 54.343 By MS/MS By MS/MS 1 1 0 0 0 2420 1443 2603 5500;5501 4578;4579 4579 203;204 195 1922 2 QNSDPTSENPPLPTR SHRVEMPRQNSDPTSE ENPPLPTRIEKFDRSS R Q N T R I 0 1 2 1 0 1 1 0 0 0 1 0 0 0 4 2 2 0 0 0 0 0 15 0 1651.7802 Q9UKE5 Q9UKE5 638 652 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 2.6367E-29 142.19 By MS/MS By MS/MS 1 1 16975000 8558400 8416900 2421 2107 2604 5502;5503 4580;4581;4582 4581 3017 3 QNSIENDIEEK SPETKCPKQNSIENDI IENDIEEKVSDLASRG K Q N E K V 0 0 2 1 0 1 3 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 11 0 1317.6048 F5GXF5;E7ETD6;Q12830 F5GXF5 1245 1255 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 3.6038E-10 136.38 By MS/MS By MS/MS 1 1 5441700 2727200 2714600 2422 590 2605 5504;5505 4583;4584 4583 788 2 QNSLGCIGECGVDSGFEAPR CKPLSTFRQNSLGCIG DSGFEAPRLGEQGGDF R Q N P R L 1 1 1 1 2 1 2 4 0 1 1 0 0 1 1 2 0 0 0 1 0 0 20 0 2151.9314 A1L020 A1L020 336 355 MEX3A RNA-binding protein MEX3A yes yes 2 0.0070596 57.679 By MS/MS 1 2270100 2270100 0 2423 310 2606 5506 4585 4585 443 1 QNSQLPAQVQNGPSQEELEIQR YLGPTLPRQNSQLPAQ QEELEIQRRQLQEQQR R Q N Q R R 1 1 2 0 0 6 3 1 0 1 2 0 0 0 2 2 0 0 0 1 0 0 22 0 2492.2255 A0A0U1RRM6;Q8N8S7;A0A075B6E5;A0A0U1RQP7 A0A0U1RRM6 127 148 ENAH Protein enabled homolog yes no 3 0.00074406 81.904 By matching By MS/MS 1 1 6162100 3412200 2749900 2424 278 2607 5507;5508 4586 4586 392 1 QNSQLPAQVQNGPSQEELEIQRR YLGPTLPRQNSQLPAQ EELEIQRRQLQEQQRQ R Q N R R Q 1 2 2 0 0 6 3 1 0 1 2 0 0 0 2 2 0 0 0 1 0 0 23 1 2648.3267 A0A0U1RRM6;Q8N8S7;A0A075B6E5;A0A0U1RQP7 A0A0U1RRM6 127 149 ENAH Protein enabled homolog yes no 3 0.00016636 79.36 By matching By MS/MS 1 1 19157000 7939400 11218000 2425 278 2608 5509;5510 4587 4587 392 1 QNSSSSDSGGSIVR KVPANITRQNSSSSDS DSGGSIVRDSQRHKQL R Q N V R D 0 1 1 1 0 1 0 2 0 1 0 0 0 0 0 6 0 0 0 1 0 0 14 0 1379.6277 Q12929 Q12929 657 670 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 2 0.0030281 69.672 By matching By MS/MS 1 2 2971900 1165600 1806300 2426 1484 2609 5511;5512;5513 4588;4589 4589 2023;2024;2025 2 QPDISCILGTGGKSPR PTSRSLLRQPDISCIL GTGGKSPRLTQSSGFF R Q P P R L 0 1 0 1 1 1 0 3 0 2 1 1 0 0 2 2 1 0 0 0 0 0 16 1 1684.8567 G3V1T4;P57740 G3V1T4 73 88 NUP107 Nuclear pore complex protein Nup107 yes no 3 0.0044015 73.984 By MS/MS By MS/MS 1 1 6589200 3595500 2993700 2427 784 2610 5514;5515 4590;4591 4590 3492 2 QPGQVIGATTPSTGSPTNK NPYVIMDKQPGQVIGA STGSPTNKISTASQVS K Q P N K I 1 0 1 0 0 2 0 3 0 1 0 1 0 0 3 2 4 0 0 1 0 0 19 0 1839.9327 Q9ULM3 Q9ULM3 505 523 YEATS2 YEATS domain-containing protein 2 yes yes 2;3 0.0057882 61.477 By matching By MS/MS 2 2 5899800 3056100 2843700 2428 2122 2611 5516;5517;5518;5519 4592;4593 4593 3040;3041;3959 2 QPGVDSLSPVASLPK ASFPRNQKQPGVDSLS SPVASLPKQIFQPSVQ K Q P P K Q 1 0 0 1 0 1 0 1 0 0 2 1 0 0 3 3 0 0 0 2 0 0 15 0 1493.809 A0A087X151;Q9UBW7 A0A087X151 211 225 ZMYM2 Zinc finger MYM-type protein 2 yes no 2 0.00035074 75.968 By MS/MS By matching 1 1 2472400 1078700 1393600 2429 104 2612 5520;5521 4594;4595 4595 137;138 2 QPLLLSEDEEDTK PVGGNYGKQPLLLSED SEDEEDTKRVVRSAKD K Q P T K R 0 0 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 13 0 1515.7304 Q99613;B5ME19;H3BPE4 Q99613 34 46 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.0095574 60.196 By matching By MS/MS 1 1 4969100 2022400 2946700 2430 399 2613 5522;5523 4596 4596 556 1 QPLLLSEDEEDTKR PVGGNYGKQPLLLSED EDEEDTKRVVRSAKDK K Q P K R V 0 1 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 14 1 1671.8315 Q99613;B5ME19;H3BPE4 Q99613 34 47 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 1.7647E-21 137.73 By MS/MS By MS/MS 2 2 107690000 45511000 62175000 2431 399 2614 5524;5525;5526;5527 4597;4598;4599;4600;4601;4602 4599 556 6 QPPGVPNGPSSPTNESAPELPQR APPPPPYRQPPGVPNG SAPELPQRHNSLHRKT R Q P Q R H 1 1 2 0 0 2 2 2 0 0 1 0 0 0 7 3 1 0 0 1 0 0 23 0 2355.1455 Q8TF74 Q8TF74 257 279 WIPF2 WAS/WASL-interacting protein family member 2 yes yes 3 0.012077 44.238 By MS/MS By matching 1 1 3637600 1906500 1731100 2432 1829 2615 5528;5529 4603 4603 2577 1 QPSEEEIIK KKYKDIIRQPSEEEII PSEEEIIKLAPPPKKA R Q P I K L 0 0 0 0 0 1 3 0 0 2 0 1 0 0 1 1 0 0 0 0 0 0 9 0 1071.5448 B1AKZ5;Q15121 B1AKZ5 92 100 PEA15 Astrocytic phosphoprotein PEA-15 yes no 2 0.0041624 87.696 By MS/MS By MS/MS 2 1 7810900 4803000 3008000 2433 359 2616 5530;5531;5532 4604;4605 4605 526 2 QPSPSHDGSLSPLQDR LHRQPGLRQPSPSHDG SLSPLQDRARTAHP__ R Q P D R A 0 1 0 2 0 2 0 1 1 0 2 0 0 0 3 4 0 0 0 0 0 0 16 0 1719.8176 A0A0B4J2A3;Q96A00 A0A0B4J2A3 56 71 PPP1R14A Protein phosphatase 1 regulatory subunit 14A yes no 3 0.021717 42.708 By MS/MS By matching 1 1 3179200 1679200 1500100 2434 195 2617 5533;5534 4606 4606 284 1 QPSSPSHNTNLR NGILGGSRQPSSPSHN PSHNTNLRAGSQEFWA R Q P L R A 0 1 2 0 0 1 0 0 1 0 1 0 0 0 2 3 1 0 0 0 0 0 12 0 1336.6484 J3KPG5;F8VU39;Q9UIF9 J3KPG5 132 143 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 0.0019576 78.705 By MS/MS By MS/MS 1 1 8809500 3674700 5134700 2435 739 2618 5535;5536 4607;4608 4608 984;985 2 QPTPPFFGR GGFDGQARQPTPPFFG PTPPFFGRDRSPLRRS R Q P G R D 0 1 0 0 0 1 0 1 0 0 0 0 0 2 3 0 1 0 0 0 0 0 9 0 1045.5345 Q96PK6 Q96PK6 204 212 RBM14 RNA-binding protein 14 yes yes 2 1.2186E-25 157.99 By MS/MS By MS/MS 1 1 53284000 17615000 35669000 2436 1918 2619 5537;5538 4609;4610;4611;4612;4613;4614;4615 4610 3893 7 QPTPPSEAAASK VEPVPVTKQPTPPSEA PSEAAASKKKPGQKKS K Q P S K K 3 0 0 0 0 1 1 0 0 0 0 1 0 0 3 2 1 0 0 0 0 0 12 0 1182.5881 Q86UP2 Q86UP2 151 162 KTN1 Kinectin yes yes 2 0.0046234 80.916 By MS/MS By MS/MS 1 1 3092600 1519000 1573600 2437 1726 2620 5539;5540 4616;4617;4618 4616 3838 3 QQASKSPYNGVR VKKEPEDRQQASKSPY KSPYNGVRKDSKRSRN R Q Q V R K 1 1 1 0 0 2 0 1 0 0 0 1 0 0 1 2 0 0 1 1 0 0 12 1 1333.6739 Q9UK58 Q9UK58 369 380 CCNL1 Cyclin-L1 yes yes 2 0.00052806 102.97 By MS/MS By matching 1 1 2367800 1549100 818710 2438 2105 2621 5541;5542 4619 4619 3013 1 QQFYHSVQDLSGGSR CVDMSTNRQQFYHSVQ QDLSGGSRQHEAPSNR R Q Q S R Q 0 1 0 1 0 3 0 2 1 0 1 0 0 1 0 3 0 0 1 1 0 0 15 0 1707.7965 P10398 P10398 152 166 ARAF Serine/threonine-protein kinase A-Raf yes yes 2 0.0049303 55.04 By MS/MS By matching 1 1 7356300 3277300 4079000 2439 1249 2622 5543;5544 4620 4620 4266 1 QQIMQLKIMTNRLR TKPDMTIRQQIMQLKI KIMTNRLRSAYNGNDV R Q Q L R S 0 2 1 0 0 3 0 0 0 2 2 1 2 0 0 0 1 0 0 0 0 0 14 2 1771.9913 H7BZL4;H7C410;P35052 H7BZL4 207 220 GPC1 Glypican-1;Secreted glypican-1 yes no 2 0.01875 44.425 By MS/MS 1 0 0 0 2440 949 2623 5545 4621 4621 114;115 1 QQIQRNTLR RLRELLIRQQIQRNTL QIQRNTLRQEKETAAA R Q Q L R Q 0 2 1 0 0 3 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 9 1 1155.6473 O14686 O14686 2693 2701 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.020024 49.813 By MS/MS 1 0 0 0 2441 1095 2624 5546 4622 4622 3596 1 QQIQSIQQSIER IKEGSQLKQQIQSIQQ SIQQSIERLLV_____ K Q Q E R L 0 1 0 0 0 5 1 0 0 3 0 0 0 0 0 2 0 0 0 0 0 0 12 0 1456.7634 B1AHD1;P55769 B1AHD1 118 129 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 2 0.0052661 69.229 By matching By MS/MS 1 1 1465900 691560 774330 2442 355 2625 5547;5548 4623 4623 523 1 QQLPQTPPSCLK KGRQQQQKQQLPQTPP QTPPSCLKTEIMSPLY K Q Q L K T 0 0 0 0 1 3 0 0 0 0 2 1 0 0 3 1 1 0 0 0 0 0 12 0 1395.718 Q8IY81 Q8IY81 568 579 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.0038561 89.629 By MS/MS 1 5448900 0 5448900 2443 1759 2626 5549 4624 4624 3849 1 QQMFENKLIK EEEKDQEKQQMFENKL MFENKLIKSEEIKDTI K Q Q I K S 0 0 1 0 0 2 1 0 0 1 1 2 1 1 0 0 0 0 0 0 0 0 10 1 1277.6802 Q9H2G2 Q9H2G2 478 487 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.01384 56.721 By MS/MS 1 198350 198350 0 2444 1997 2627 5550 4625 4625 290 287 0 QQNTQEMPWNVRMQSPKQR SLLRENRRQQNTQEMP RMQSPKQRTSRKTKAF R Q Q Q R T 0 2 2 0 0 5 1 0 0 0 0 1 2 0 2 1 1 1 0 1 0 0 19 2 2385.143 F2Z3F7;Q8N6F7 F2Z3F7 12 30 GCSAM Germinal center-associated signaling and motility protein yes no 4 0.0085467 43.454 By MS/MS 1 2746800 2746800 0 2445 695 2628 5551 4626 4626 105;382 83 932 1 QQPQPSQTESPQEAQIIQAK RSSRLQAKQQPQPSQT EAQIIQAKKRKTTQFT K Q Q A K K 2 0 0 0 0 7 2 0 0 2 0 1 0 0 3 2 1 0 0 0 0 0 20 0 2235.1131 E5RHN2;E5RK20;Q8WUE3;O96020 E5RHN2 12 31 CCNE2 G1/S-specific cyclin-E2 yes no 3 0.0069479 49.537 By MS/MS By matching 1 1 3024200 1371000 1653200 2446 553 2629 5552;5553 4627;4628 4627 733;734;3400 2 QQQEPTGEPSPK RGRGRPRKQQQEPTGE PTGEPSPKRPRGRPKG K Q Q P K R 0 0 0 0 0 3 2 1 0 0 0 1 0 0 3 1 1 0 0 0 0 0 12 0 1324.6259 P52926;F5H2U8;F5H2A4;F5H6H0 P52926 35 46 HMGA2 High mobility group protein HMGI-C yes no 2 0.012439 59.155 By MS/MS By MS/MS 2 2 5288600 2512000 2776600 2447 1401 2630 5554;5555;5556;5557 4629;4630;4631 4630 1888 3 QQQQSGSGTKSRPAK KNRRAKCRQQQQSGSG GTKSRPAKKKSSPVRE R Q Q A K K 1 1 0 0 0 4 0 2 0 0 0 2 0 0 1 3 1 0 0 0 0 0 15 2 1586.8125 P32242 P32242 95 109 OTX1 Homeobox protein OTX1 yes yes 2 0.010066 58.831 By matching By MS/MS 1 1 1352800 625900 726920 2448 1335 2631 5558;5559 4632 4632 408;409;410 1754 0 QQSEEDLLLQDFSR MAPKGSSKQQSEEDLL LLLQDFSRNLSAKSSA K Q Q S R N 0 1 0 2 0 3 2 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 14 0 1706.8111 C9JA28;Q9UNL2 C9JA28 9 22 SSR3 Translocon-associated protein subunit gamma yes no 2 0.00032803 90.229 By MS/MS 1 4187400 0 4187400 2449 452 2632 5560 4633 4633 644 1 QQTEKPESEDEWER KKKTGGSKQQTEKPES ESEDEWERTERERLQD K Q Q E R T 0 1 0 1 0 2 5 0 0 0 0 1 0 0 1 1 1 1 0 0 0 0 14 1 1789.7755 A2AB15;A0A140T947;O60231 A2AB15 93 106 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 3 0.00074149 73.279 By MS/MS By matching 1 1 6408100 3409200 2998800 2450 280 2633 5561;5562 4634 4634 400 1 QQTEKPESEDEWERTER KKKTGGSKQQTEKPES DEWERTERERLQDLEE K Q Q E R E 0 2 0 1 0 2 6 0 0 0 0 1 0 0 1 1 2 1 0 0 0 0 17 2 2175.9669 A2AB15;A0A140T947;O60231 A2AB15 93 109 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 3 0.0045565 62.68 By MS/MS By matching 1 1 44114000 21893000 22220000 2451 280 2634 5563;5564 4635 4635 400 1 QQVPSGESAILDR KELLIFNKQQVPSGES GESAILDRVADGMVFG K Q Q D R V 1 1 0 1 0 2 1 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 13 0 1398.7103 P09874 P09874 270 282 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.015294 58.37 By matching By MS/MS 1 1 1955900 843140 1112700 2452 1244 2635 5565;5566 4636 4636 1 QRAEIYALNR AQQELKQRQRAEIYAL AEIYALNRVMTELEQQ R Q R N R V 2 2 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 10 1 1232.6626 Q8N300 Q8N300 35 44 CCDC23 Coiled-coil domain-containing protein 23 yes yes 3 0.0022422 68.657 By MS/MS 1 0 0 0 2453 1772 2636 5567 4637 4637 4393 1 QRASLSSAPVVLVGDHA QSKLAQRRQRASLSSA VVLVGDHA________ R Q R H A - 3 1 0 1 0 1 0 1 1 0 2 0 0 0 1 3 0 0 0 3 0 0 17 1 1705.9111 Q9HBH9 Q9HBH9 449 465 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 yes yes 3 0.01792 45.084 By MS/MS By matching 1 1 1389900 941390 448540 2454 2025 2637 5568;5569 4638 4638 2894;2895 1 QRGSETDTDSEIHESASDKDSLSK EVVPKRRRQRGSETDT SDKDSLSKGKLPKREE R Q R S K G 1 1 0 4 0 1 3 1 1 1 1 2 0 0 0 6 2 0 0 0 0 0 24 2 2621.1689 E7EPN9;Q9Y520 E7EPN9 1262 1285 PRRC2C Protein PRRC2C yes no 4 0.0029221 57.986 By MS/MS By matching 1 1 12903000 7609000 5294400 2455 570 2638 5570;5571 4639 4639 758;3410 1 QRHDGAFLIR KAEEMLSKQRHDGAFL HDGAFLIRESESAPGD K Q R I R E 1 2 0 1 0 1 0 1 1 1 1 0 0 1 0 0 0 0 0 0 0 0 10 1 1211.6523 P62993;J3KT38;J3QRL5 P62993 77 86 GRB2 Growth factor receptor-bound protein 2 yes no 3 0.0030666 68.786 By MS/MS By matching 1 1 1447000 840650 606400 2456 1436 2639 5572;5573 4640 4640 1 QRPDLGSAQK GVRGTPVRQRPDLGSA PDLGSAQKGLQVDLQS R Q R Q K G 1 1 0 1 0 2 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 1 1098.5782 E5RFR3;E5RFJ8;P33991 E5RFR3 114 123 MCM4 DNA replication licensing factor MCM4 yes no 2 9.941E-06 130.01 By MS/MS By MS/MS 1 1 3856200 1774000 2082200 2457 547 2640 5574;5575 4641;4642 4642 729 2 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER ________________ EPEEQEERKPSATQQK R Q R E R K 3 3 0 5 0 3 6 1 0 0 0 0 0 0 4 7 1 0 0 0 0 0 33 2 3588.4956 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 6 38 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 yes no 4 0.0026868 42.894 By matching By MS/MS 1 1 14419000 8091100 6327400 2458 304 2641 5576;5577 4643 4643 434;435 1 QRSLGPSLATDKS DFPQNAIRQRSLGPSL PSLATDKS________ R Q R K S - 1 1 0 1 0 1 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 13 2 1358.7154 Q9H3N1 Q9H3N1 268 280 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.011044 75.02 By matching By MS/MS 1 1 36604000 19570000 17034000 2459 2002 2642 5578;5579 4644 4644 2866 1 QRSPIALPVK RPSSFRDRQRSPIALP SPIALPVKQEPPQIDA R Q R V K Q 1 1 0 0 0 1 0 0 0 1 1 1 0 0 2 1 0 0 0 1 0 0 10 1 1107.6764 Q8TF01 Q8TF01 209 218 PNISR Arginine/serine-rich protein PNISR yes yes 2;3 0.0024265 106.68 By MS/MS By MS/MS 2 2 8110600 3563500 4547000 2460 1828 2643 5580;5581;5582;5583 4645;4646;4647 4647 2575 3 QSETVDQNSDSDEMLAILK PNKLPKSKQSETVDQN DEMLAILKEVSRMSHS K Q S L K E 1 0 1 3 0 2 2 0 0 1 2 1 1 0 0 3 1 0 0 1 0 0 19 0 2121.9736 P46100;A0A096LNW1;A0A096LNL9 P46100 721 739 ATRX Transcriptional regulator ATRX yes no 2 0.013472 50.145 By MS/MS By matching 1 1 3175600 1729300 1446300 2461 1364 2644 5584;5585 4648 4648 1801 1 QSFDDNDSEELEDKDSK KKGQKGKKQSFDDNDS ELEDKDSKSKKTAKPK K Q S S K S 0 0 1 5 0 1 3 0 0 0 1 2 0 1 0 3 0 0 0 0 0 0 17 1 1999.8131 A0A087WUT6;O60841 A0A087WUT6 106 122 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 0.002723 76.24 By MS/MS By MS/MS 1 2 150020000 36404000 113620000 2462 43 2645 5586;5587;5588 4649;4650;4651 4651 55;56 3 QSFDDNDSEELEDKDSKSK KKGQKGKKQSFDDNDS EDKDSKSKKTAKPKVE K Q S S K K 0 0 1 5 0 1 3 0 0 0 1 3 0 1 0 4 0 0 0 0 0 0 19 2 2214.94 A0A087WUT6;O60841 A0A087WUT6 106 124 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0036724 69.111 By matching By MS/MS 1 1 6761700 4081200 2680500 2463 43 2646 5589;5590 4652 4652 55;56 1 QSGLSSLVNGKSPIR ADMNESCKQSGLSSLV VNGKSPIRSLMHRSAR K Q S I R S 0 1 1 0 0 1 0 2 0 1 2 1 0 0 1 4 0 0 0 1 0 0 15 1 1541.8526 H0Y612;Q9UPN9 H0Y612 612 626 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 3 6.7396E-05 87.287 By MS/MS By MS/MS 2 3 5687900 2298500 3389400 2464 835 2647;2648 5591;5592;5593;5594;5595 4653;4654;4655;4656 4653 125;391 1126;1127;1128 4 QSHSESPSLQSK DTSSPEVRQSHSESPS ESPSLQSKSQTSPKGG R Q S S K S 0 0 0 0 0 2 1 0 1 0 1 1 0 0 1 5 0 0 0 0 0 0 12 0 1313.6212 Q9UQ35 Q9UQ35 1078 1089 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 8.6438E-21 142.1 By MS/MS By MS/MS 1 2 7474400 3197000 4277300 2465 2134 2649 5596;5597;5598 4657;4658;4659;4660;4661 4658 3077;3078 5 QSISFPEGLR ALTADLPKQSISFPEG ISFPEGLRTPASPSSA K Q S L R T 0 1 0 0 0 1 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1132.5877 H7C3M7;O94887 H7C3M7 73 82 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 yes no 2 0.0067035 73.9 By MS/MS 1 576860 0 576860 2466 964 2650 5599 4662 4662 1295 1 QSLPASPR RERSLKKRQSLPASPR QSLPASPRARLSASTA R Q S P R A 1 1 0 0 0 1 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 8 0 854.46102 Q3KQU3;H0YF21 Q3KQU3 441 448 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.0069906 108.31 By MS/MS By MS/MS 1 1 2716600 1636700 1079900 2467 1583 2651 5600;5601 4663;4664;4665 4663 2191 3 QSMDMSPIK PFLRGHTKQSMDMSPI SMDMSPIKIVKNPDGS K Q S I K I 0 0 0 1 0 1 0 0 0 1 0 1 2 0 1 2 0 0 0 0 0 0 9 0 1035.4729 F5H658;Q14562 F5H658 455 463 DHX8 ATP-dependent RNA helicase DHX8 yes no 2 0.0012032 96.756 By MS/MS By matching 1 1 4468000 2149000 2319000 2468 719 2652 5602;5603 4666 4666 953 1 QSNASSDVEVEEK SSQQAATKQSNASSDV SDVEVEEKETSVSKED K Q S E K E 1 0 1 1 0 1 3 0 0 0 0 1 0 0 0 3 0 0 0 2 0 0 13 0 1420.6318 O75475 O75475 101 113 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 2.3266E-180 209.53 By MS/MS By MS/MS 2 1 23240000 11579000 11662000 2469 1163 2653 5604;5605;5606 4667;4668;4669 4667 1550;1551 3 QSNASSDVEVEEKETSVSKEDTDHEEK SSQQAATKQSNASSDV EDTDHEEKASNEDVTK K Q S E K A 1 0 1 3 0 1 7 0 1 0 0 3 0 0 0 5 2 0 0 3 0 0 27 2 3035.3327 O75475 O75475 101 127 PSIP1 PC4 and SFRS1-interacting protein yes yes 4 1.3892E-05 63.462 By MS/MS By MS/MS 1 2 56243000 27536000 28707000 2470 1163 2654 5607;5608;5609 4670;4671 4671 1550;1551 2 QSNVAAPGDATPPAEK LKPIPLKRQSNVAAPG DATPPAEKKYKPLNTT R Q S E K K 4 0 1 1 0 1 1 1 0 0 0 1 0 0 3 1 1 0 0 1 0 0 16 0 1551.7529 Q96QC0 Q96QC0 246 261 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 2 0.0050642 71.268 By matching By MS/MS 1 1 4083400 2230100 1853300 2471 1923 2655 5610;5611 4672 4672 3894 1 QSPASPPPLGGGAPVR ASPSPTSRQSPASPPP LGGGAPVRTAKAERRH R Q S V R T 2 1 0 0 0 1 0 3 0 0 1 0 0 0 5 2 0 0 0 1 0 0 16 0 1486.7892 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1363 1378 SCRIB Protein scribble homolog yes no 2 3.5333E-13 109.14 By MS/MS By MS/MS 1 1 30509000 15083000 15426000 2472 245 2656 5612;5613 4673;4674;4675;4676 4676 354 4 QSPGPALAR AAAAASVRQSPGPALA SPGPALARLEGREFEF R Q S A R L 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 9 0 895.48756 P85037 P85037 100 108 FOXK1 Forkhead box protein K1 yes yes 2 0.012819 68.557 By MS/MS By MS/MS 1 1 8901200 4117700 4783500 2473 1445 2657 5614;5615 4677;4678 4678 1924 2 QSQQPMKPISPVKDPVSPASQK LEGDHTIRQSQQPMKP PVSPASQKMVIQGPSS R Q S Q K M 1 0 0 1 0 4 0 0 0 1 0 3 1 0 5 4 0 0 0 2 0 0 22 2 2376.2471 Q12888;A6NNK5 Q12888 1085 1106 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.0095307 46.356 By matching By MS/MS 1 1 12543000 6689500 5853600 2474 1481 2658 5616;5617 4679 4679 204 2011;2012 1 QSSLSEKK SKIGSISRQSSLSEKK QSSLSEKKIPEPSPVT R Q S K K I 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 3 0 0 0 0 0 0 8 1 905.48181 Q7Z4S6;H0YHT2;A0A1B0GV47;H0YI78 Q7Z4S6 1227 1234 KIF21A Kinesin-like protein KIF21A yes no 2 0.020102 64.103 By MS/MS By matching 1 1 1431800 619780 811990 2475 1714 2659 5618;5619 4680 4680 2404;2405 0 QSSLTFQSSDPEQMR GPSFTVMRQSSLTFQS SSDPEQMRQSLLTAIR R Q S M R Q 0 1 0 1 0 3 1 0 0 0 1 0 1 1 1 4 1 0 0 0 0 0 15 0 1739.7785 A0A0X1KG75;A0A0D9SG04;Q53SF7 A0A0X1KG75 1108 1122 COBLL1 Cordon-bleu protein-like 1 yes no 2 0.00072664 73.802 By MS/MS 1 1554500 0 1554500 2476 237 2660 5620 4681 4681 344 1 QSSPNLQVSSDGTLK SPSPDFYKQSSPNLQV VSSDGTLKYMEVTLRP K Q S L K Y 0 0 1 1 0 2 0 1 0 0 2 1 0 0 1 4 1 0 0 1 0 0 15 0 1559.7791 Q9Y5F6 Q9Y5F6 744 758 PCDHGC5 Protocadherin gamma-C5 yes yes 2 0.009794 44.612 By matching By MS/MS 1 1 1386800 571540 815220 2477 2166 2661 5621;5622 4682 4682 328;465 3143;3144;3145 1 QSSSSDTDLSLTPK SPSKSYSRQSSSSDTD TDLSLTPKTGMGSGSA R Q S P K T 0 0 0 2 0 1 0 0 0 0 2 1 0 0 1 5 2 0 0 0 0 0 14 0 1464.6944 Q86YS7;H0YFE9 Q86YS7 303 316 C2CD5 C2 domain-containing protein 5 yes no 2 4.6977E-06 102.28 By MS/MS By matching 1 1 2851400 1568100 1283300 2478 1746 2662 5623;5624 4683 4683 2456 1 QSSVTQVTEQSPK ISASVAVKQSSVTQVT QVTEQSPKVQSRYTKE K Q S P K V 0 0 0 0 0 3 1 0 0 0 0 1 0 0 1 3 2 0 0 2 0 0 13 0 1417.7049 Q14966;A0A096LPH6;C9JWN0 Q14966 118 130 ZNF638 Zinc finger protein 638 yes no 2 0.010152 59.673 By matching By MS/MS 1 1 2624200 1338400 1285800 2479 1531 2663 5625;5626 4684 4684 2112 1 QSVDKVTSPTKV SKRNLWEKQSVDKVTS KVTSPTKV________ K Q S K V - 0 0 0 1 0 1 0 0 0 0 0 2 0 0 1 2 2 0 0 3 0 0 12 2 1287.7034 E7EX44;Q05682 E7EX44 546 557 CALD1 Caldesmon yes no 2 6.9265E-08 122.97 By MS/MS By matching 1 1 35950000 18282000 17669000 2480 604 2664 5627;5628 4685 4685 834 1 QTALVELVK EKERQIKKQTALVELV TALVELVKHKPKATKE K Q T V K H 1 0 0 0 0 1 1 0 0 0 2 1 0 0 0 0 1 0 0 2 0 0 9 0 999.59645 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 550 558 ALB Serum albumin yes no 2 0.0078837 85.862 By MS/MS By matching 1 1 1163300 634920 528360 + 2481 209 2665 5629;5630 4686 4686 1 QTEPVSPVLKR AIENCERRQTEPVSPV PVSPVLKRIKRCLRSE R Q T K R I 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 1 1 0 0 2 0 0 11 1 1252.7139 Q8IYH5 Q8IYH5 108 118 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.0027243 97.957 By MS/MS By MS/MS 1 1 6991900 3521100 3470800 2482 1762 2666 5631;5632 4687;4688 4687 2480 2 QTGGEEGDGASGYDAYWK TRSLKFGRQTGGEEGD SGYDAYWKNLSSDKYG R Q T W K N 2 0 0 2 0 1 2 5 0 0 0 1 0 0 0 1 1 1 2 0 0 0 18 0 1889.7704 Q9Y3S2 Q9Y3S2 238 255 ZNF330 Zinc finger protein 330 yes yes 2 0.021565 41.401 By matching By MS/MS 1 1 2658100 1345500 1312700 2483 2155 2667 5633;5634 4689 4689 4467 1 QTIIVVLENVQR QEYFERNRQTIIVVLE VVLENVQRNLKHINID R Q T Q R N 0 1 1 0 0 2 1 0 0 2 1 0 0 0 0 0 1 0 0 3 0 0 12 0 1410.8195 P04114 P04114 2086 2097 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes yes 2 0.017391 58.63 By matching By MS/MS 1 1 577230 340530 236690 2484 1216 2668 5635;5636 4690 4690 1 QTLPSSPTTTK TVNPDRIKQTLPSSPT PSSPTTTKSSPSDPMT K Q T T K S 0 0 0 0 0 1 0 0 0 0 1 1 0 0 2 2 4 0 0 0 0 0 11 0 1159.6085 F8VW64;F8VWX1;F8W659;J3KQU3;P51513 F8VW64 27 37 NOVA1 RNA-binding protein Nova-1 yes no 2 0.00011804 111.31 By MS/MS 1 9391500 9391500 0 2485 743 2669 5637 4691 4691 987 1 QTLQSEQPLQVARCTK LWDLAADKQTLQSEQP LQVARCTKIINADSED K Q T T K I 1 1 0 0 1 4 1 0 0 0 2 1 0 0 1 1 2 0 0 1 0 0 16 1 1885.968 C9JLS9;P35998 C9JLS9 85 100 PSMC2 26S protease regulatory subunit 7 yes no 3 0.017874 43.184 By MS/MS 1 6660500 0 6660500 2486 470 2670 5638 4692 4692 657 0 QTVPSENIPLPECSSPPSCKR STSGDFVKQTVPSENI SSPPSCKRKVGGTSGR K Q T K R K 0 1 1 0 2 1 2 0 0 1 1 1 0 0 5 4 1 0 0 1 0 0 21 1 2382.1308 Q99728 Q99728 350 370 BARD1 BRCA1-associated RING domain protein 1 yes yes 3 0.0079896 45.257 By MS/MS By matching 1 1 935480 552220 383260 2487 1945 2671 5639;5640 4693 4693 2753 1 QVAEQGGDLSPAANR RIQVAQEKQVAEQGGD DLSPAANRSQKASQSR K Q V N R S 3 1 1 1 0 2 1 2 0 0 1 0 0 0 1 1 0 0 0 1 0 0 15 0 1511.7328 O94804 O94804 429 443 STK10 Serine/threonine-protein kinase 10 yes yes 2 4.7849E-38 149.31 By MS/MS By MS/MS 1 1 9344800 5270600 4074200 2488 1174 2672 5641;5642 4694;4695 4695 1569 2 QVAGDAPVEQATAETASPVHR SEGATELRQVAGDAPV ETASPVHREEHGRGES R Q V H R E 5 1 0 1 0 2 2 1 1 0 0 0 0 0 2 1 2 0 0 3 0 0 21 0 2133.0451 A0A087X055;Q92766 A0A087X055 373 393 RREB1 Ras-responsive element-binding protein 1 yes no 3 0.0021187 62.722 By MS/MS By MS/MS 1 1 3679700 1801800 1877800 2489 95 2673 5643;5644 4696;4697;4698 4697 121;3241 3 QVLQSTQSPR EEELKRQRQVLQSTQS LQSTQSPRTKNAPSLP R Q V P R T 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 10 0 1142.6044 Q9Y2D5 Q9Y2D5 741 750 AKAP2 A-kinase anchor protein 2 yes yes 2 4.2459E-05 123.28 By MS/MS By MS/MS 1 1 10200000 4686600 5513400 2490 2142 2674 5645;5646 4699;4700;4701;4702 4702 3108 4 QVLQSTQSPRTK EEELKRQRQVLQSTQS STQSPRTKNAPSLPSR R Q V T K N 0 1 0 0 0 3 0 0 0 0 1 1 0 0 1 2 2 0 0 1 0 0 12 1 1371.747 Q9Y2D5 Q9Y2D5 741 752 AKAP2 A-kinase anchor protein 2 yes yes 3 0.020936 40.154 By MS/MS By matching 1 1 3340500 1471300 1869100 2491 2142 2675 5647;5648 4703 4703 3108;3973 0 QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR DGTVVTIKQVLTAPGS PAPGPCPRSNAMLAVK K Q V P R S 4 2 0 2 1 2 4 4 0 0 2 0 0 0 6 4 1 0 0 1 0 0 33 1 3361.5481 Q8TBB5 Q8TBB5 400 432 KLHDC4 Kelch domain-containing protein 4 yes yes 3 0.014847 40.456 By matching By MS/MS 1 1 20190000 7635900 12554000 2492 1816 2676 5649;5650 4704 4704 2559;2560 1 QVQEFLKDGDDVIIIGVFK SKEILTLKQVQEFLKD VIIIGVFKGESDPAYQ K Q V F K G 0 0 0 3 0 2 1 2 0 3 1 2 0 2 0 0 0 0 0 3 0 0 19 1 2162.1623 P13667 P13667 295 313 PDIA4 Protein disulfide-isomerase A4 yes yes 3 0.017099 42.044 By MS/MS 1 2249600 2249600 0 2493 1270 2677 5651 4705 4705 1 QVSITGFFQR AALGKANRQVSITGFF SITGFFQRK_______ R Q V Q R K 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 1 1 0 0 1 0 0 10 0 1181.6193 Q15054;H0YEX7 Q15054 456 465 POLD3 DNA polymerase delta subunit 3 yes no 2 0.0056777 79.23 By MS/MS By MS/MS 1 1 2440900 1265700 1175200 2494 1540 2678 5652;5653 4706;4707 4706 2125 2 QYATLDVYNPFETR VIQHRPSRQYATLDVY VYNPFETREPPPAYEP R Q Y T R E 1 1 1 1 0 1 1 0 0 0 1 0 0 1 1 0 2 0 2 1 0 0 14 0 1715.8155 O14828 O14828 34 47 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 7.1615E-13 114.72 By MS/MS By MS/MS 2 2 29869000 13544000 16325000 2495 1097 2679;2680 5654;5655;5656;5657 4708;4709;4710 4708 4234;4235 3 QYEQQTYQVIPEVIK KQDLAYERQYEQQTYQ QVIPEVIKNFIQYFHK R Q Y I K N 0 0 0 0 0 4 2 0 0 2 0 1 0 0 1 0 1 0 2 2 0 0 15 0 1864.9571 H7C3A0;C9JHP4;C9K0Q7;B0QY89;Q9Y262 H7C3A0 52 66 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 2 1.3333E-08 107.09 By matching By MS/MS 1 1 2643100 824630 1818400 2496 348 2681 5658;5659 4711 4711 4078 1 RADLNQGIGEPQSPSR ELSAKLLRRADLNQGI GEPQSPSRRVFNPYTE R R A S R R 1 2 1 1 0 2 1 2 0 1 1 0 0 0 2 2 0 0 0 0 0 0 16 1 1723.8602 Q96C19 Q96C19 62 77 EFHD2 EF-hand domain-containing protein D2 yes yes 3 0.0086287 46.892 By MS/MS By MS/MS 1 1 2689200 1181100 1508000 2497 1879 2682 5660;5661 4712;4713 4713 2650;2651 2 RAEVLGHKTPEPAPR GPSRFGLKRAEVLGHK KTPEPAPRRTEITIVK K R A P R R 2 2 0 0 0 0 2 1 1 0 1 1 0 0 3 0 1 0 0 1 0 0 15 2 1656.906 K7ENL0;Q9UHD8;K7ER34;K7EJ51 K7ENL0 119 133 SEPT9 Septin-9 yes no 4 0.0053305 51.092 By MS/MS By matching 1 1 925340 533170 392170 2498 1049 2683 5662;5663 4714 4714 3579 1 RALPNNTSSSPQPK ELPPGSTKRALPNNTS TSSSPQPKKKPLDGEY K R A P K K 1 1 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 14 1 1495.7743 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 147 160 TP53 Cellular tumor antigen p53 yes no 2;3 0.0036428 64.104 By MS/MS By MS/MS 1 2 6694500 2070800 4623700 2499 93 2684 5664;5665;5666 4715;4716 4715 114;115;116;3240 2 RAPSVANVGSHCDLSLK KESITRRRRAPSVANV SHCDLSLKIPEISIQD R R A L K I 2 1 1 1 1 0 0 1 1 0 2 1 0 0 1 3 0 0 0 2 0 0 17 1 1809.9156 Q5HY54;Q60FE5;P21333 Q5HY54 2109 2125 FLNA Filamin-A yes no 3 0.0090964 45.885 By matching By MS/MS 1 1 4577100 1572500 3004600 2500 1302 2685 5667;5668 4717 4717 1713 1 RAQIPEGDYLSYR LGDPGSTRRAQIPEGD EGDYLSYREFHSAGRT R R A Y R E 1 2 0 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 0 13 1 1566.7791 Q96RT1 Q96RT1 1096 1108 ERBB2IP Protein LAP2 yes yes 3 0.00012916 84.173 By MS/MS 1 722080 0 722080 2501 1927 2686 5669 4718 4718 4425 1 RASGQAFELILSPR IQVKELEKRASGQAFE FELILSPRSKESVPEF K R A P R S 2 2 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 14 1 1543.8471 A2A2D0;P16949 A2A2D0 14 27 STMN1 Stathmin yes no 2;3 5.8089E-75 171.85 By MS/MS By MS/MS 3 3 27567000 11707000 15859000 2502 312 2687;2688 5670;5671;5672;5673;5674;5675 4719;4720;4721;4722;4723;4724;4725;4726 4726 445;446 8 RASISEPSDTDPEPR VKSRVRVRRASISEPS SDTDPEPRTLNPSPAG R R A P R T 1 2 0 2 0 0 2 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 15 1 1655.7751 C9JQV3;Q8N1F8 C9JQV3 385 399 STK11IP Serine/threonine-protein kinase 11-interacting protein yes no 2;3 1.7651E-07 106.19 By MS/MS By MS/MS 1 2 13778000 5082600 8695500 2503 475 2689 5676;5677;5678 4727;4728;4729 4728 663 3 RASLSEIGFGK QPMSRRSRRASLSEIG LSEIGFGKMETYIKLE R R A G K M 1 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 0 0 0 11 1 1163.6299 F5H6Z0;Q00537 F5H6Z0 125 135 CDK17 Cyclin-dependent kinase 17 yes no 2 0.003599 91.307 By matching By MS/MS 1 1 8106800 3600200 4506700 2504 721 2690 5679;5680 4730 4730 955 1 RASLTLEEK DGLQNKHKRASLTLEE ASLTLEEKQKLAKEQE K R A E K Q 1 1 0 0 0 0 2 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 9 1 1045.5768 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 679 687 SCYL2 SCY1-like protein 2 yes no 2 0.010991 86.344 By MS/MS By matching 1 1 5661700 2791500 2870100 2505 265 2691 5681;5682 4731 4731 381 1 RASPSKPASAPASR ADAKAPEKRASPSKPA PASAPASRSGSKSTQT K R A S R S 4 2 0 0 0 0 0 0 0 0 0 1 0 0 3 4 0 0 0 0 0 0 14 2 1381.7426 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4;B5MEG9 E7EVA0 1930 1943 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0050144 68.625 By matching By MS/MS 1 1 24335000 10496000 13839000 2506 596 2692 5683;5684 4732 4732 816 1 RASPSPPPK SPPPPPKRRASPSPPP ASPSPPPKRRVSHSPP R R A P K R 1 1 0 0 0 0 0 0 0 0 0 1 0 0 4 2 0 0 0 0 0 0 9 1 935.51886 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 633 641 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0017687 89.805 By MS/MS By MS/MS 1 1 3744700 1483200 2261500 2507 346 2693 5685;5686 4733;4734 4734 496;497 2 RASSASVPAVGASAEGTR RRQEPLRRRASSASVP GASAEGTRRDRLGSYS R R A T R R 5 2 0 0 0 0 1 2 0 0 0 0 0 0 1 4 1 0 0 2 0 0 18 1 1672.8493 V9GYZ0;Q9BZ23 V9GYZ0 43 60 PANK2 Pantothenate kinase 2, mitochondrial yes no 2 0.0030409 59.227 By MS/MS By matching 1 1 2006400 996000 1010400 2508 1980 2694 5687;5688 4735 4735 2815;2816 1 RASSLNVLNVGGK EPKNPGMKRASSLNVL NVLNVGGKAAEDRFQE K R A G K A 1 1 2 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 2 0 0 13 1 1313.7415 H0YG16;H0YJK1;G3V5R9 H0YG16 228 240 KLC1 yes no 2 3.6111E-05 105.19 By MS/MS By MS/MS 1 1 7009900 3243300 3766600 2509 884 2695 5689;5690 4736;4737 4737 1192 2 RASWASENGETDAEGTQMTPAK HSPRGTKRRASWASEN GTQMTPAKRPALQDSN R R A A K R 4 1 1 1 0 1 3 2 0 0 0 1 1 0 1 2 3 1 0 0 0 0 22 1 2336.0339 Q12789 Q12789 1863 1884 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.01332 44.301 By MS/MS By matching 1 1 1955700 821420 1134300 2510 1477 2696 5691;5692 4738 4738 1997;1998 1 RATPISVWGPLGGLVR PVCCPSCRRATPISVW GPLGGLVRTPSVQSLG R R A V R T 1 2 0 0 0 0 0 3 0 1 2 0 0 0 2 1 1 1 0 2 0 0 16 1 1677.9679 M0QY76;M0R0H3;P26651 M0QY76 261 276 ZFP36 Tristetraprolin yes no 3 0.0074785 55.213 By MS/MS 1 3397800 0 3397800 2511 1061 2697 5693 4739 4739 1397;3585 1 RDGPGLERSPGEPGGAAPER EPLRKRPRRDGPGLER PGGAAPEREVPAAARG R R D E R E 2 3 0 1 0 0 3 5 0 0 1 0 0 0 4 1 0 0 0 0 0 0 20 2 2003.9773 Q96EB6 Q96EB6 39 58 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 3 0.0095409 60.062 By matching By MS/MS 1 2 20587000 7689300 12898000 2512 1887 2698 5694;5695;5696 4740 4740 2664 1 RDPLDISSSR R D S R 0 2 0 2 0 0 0 0 0 1 1 0 0 0 1 3 0 0 0 0 0 0 10 1 1144.5836 REV__A6NCI4 yes yes 2 0.012696 55.98 By MS/MS 1 5596400 0 5596400 + 2513 2190 2699 5697 4741 4741 3177;3178 1 RDSDGVDGFEAEGK IHNNRKRRRDSDGVDG DGFEAEGKKDKKDYDN R R D G K K 1 1 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1480.643 Q96KR1 Q96KR1 1052 1065 ZFR Zinc finger RNA-binding protein yes yes 2 2.247E-16 127.61 By MS/MS By MS/MS 1 1 22085000 9388200 12697000 2514 1904 2700 5698;5699 4742;4743 4742 2701 2 RDSDGVDGFEAEGKK IHNNRKRRRDSDGVDG GFEAEGKKDKKDYDNF R R D K K D 1 1 0 3 0 0 2 3 0 0 0 2 0 1 0 1 0 0 0 1 0 0 15 2 1608.738 Q96KR1 Q96KR1 1052 1066 ZFR Zinc finger RNA-binding protein yes yes 3 0.0031956 68.676 By matching By MS/MS 1 1 7005800 3163000 3842800 2515 1904 2701 5700;5701 4744 4744 2701 1 RDSFDDRGPSLNPVLDYDHGSR WEEKRHFRRDSFDDRG LDYDHGSRSQESGYYD R R D S R S 0 3 1 5 0 0 0 2 1 0 2 0 0 1 2 3 0 0 1 1 0 0 22 2 2517.1633 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 186 207 MATR3 Matrin-3 yes no 4 0.0016737 65.149 By matching By MS/MS 1 1 33805000 13195000 20610000 2516 257 2702 5702;5703 4745 4745 370 1 RDSFDNCSLGESSK NAIKRLHKRDSFDNCS CSLGESSKIGISDISS K R D S K I 0 1 1 2 1 0 1 1 0 0 1 1 0 1 0 4 0 0 0 0 0 0 14 1 1600.6787 Q5UIP0 Q5UIP0 1686 1699 RIF1 Telomere-associated protein RIF1 yes yes 2;3 0.011363 62.104 By MS/MS By matching 2 2 45853000 22809000 23044000 2517 1641 2703 5704;5705;5706;5707 4746;4747 4747 2285 2 RDSLTGSSDLYK SNTGSGSRRDSLTGSS TGSSDLYKRTSSSLTP R R D Y K R 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 0 0 12 1 1340.6572 H0YDK8;E9PR38;Q5T1Z4;Q5T1Z8;Q14671 H0YDK8 419 430 PUM1 Pumilio homolog 1 yes no 2;3 1.8604E-08 120.21 By MS/MS By MS/MS 2 1 23035000 9109300 13926000 2518 678 2704 5708;5709;5710 4748;4749;4750 4750 917;3454 3 RDSLTGSSDLYKR SNTGSGSRRDSLTGSS GSSDLYKRTSSSLTPI R R D K R T 0 2 0 2 0 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 0 0 13 2 1496.7583 H0YDK8;E9PR38;Q5T1Z4;Q5T1Z8;Q14671 H0YDK8 419 431 PUM1 Pumilio homolog 1 yes no 3 1.8841E-06 89.877 By MS/MS By MS/MS 1 2 17040000 7929300 9111100 2519 678 2705 5711;5712;5713 4751;4752 4752 917;3454 0 RDSSDDWEIPDGQITVGQR NRMKTLGRRDSSDDWE GQITVGQRIGSGSFGT R R D Q R I 0 2 0 4 0 2 1 2 0 2 0 0 0 0 1 2 1 1 0 1 0 0 19 1 2173.0036 H7C560;P15056 H7C560 52 70 BRAF Serine/threonine-protein kinase B-raf yes no 3 0.01205 42.711 By MS/MS 1 2591900 2591900 0 2520 973 2706 5714 4753 4753 1304;1305 1 RDSSESQLASTESDKPTTGR PCLLMELRRDSSESQL SDKPTTGRVYESDSSN R R D G R V 1 2 0 2 0 1 2 1 0 0 1 1 0 0 1 5 3 0 0 0 0 0 20 2 2151.004 K7EQH1;A0A087WVF1;Q5BIX2;Q96B23 K7EQH1 64 83 C18orf25;ARKL1 Uncharacterized protein C18orf25 yes no 3 1.4198E-10 102.92 By MS/MS By MS/MS 1 1 35348000 16971000 18377000 2521 52 2707 5715;5716 4754;4755 4755 70 2 RDSSSHEETPGSHPLYGHGECK QPTVLTSRRDSSSHEE LYGHGECKWPGCETLC R R D C K W 0 1 0 1 1 0 3 3 3 0 1 1 0 0 2 4 1 0 1 0 0 0 22 1 2466.0618 B7ZBM3;Q8IVH2 B7ZBM3 289 310 FOXP4 Forkhead box protein P4 yes no 4 0.0070884 42.309 By MS/MS 1 993220 0 993220 2522 413 2708 5717 4756 4756 579;580;581 1 RDYDDMSPR GRPMPPSRRDYDDMSP DYDDMSPRRGPPPPPP R R D P R R 0 2 0 3 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 9 1 1153.4822 P61978;Q5T6W2 P61978 278 286 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.020247 79.744 By matching By MS/MS 1 1 9289700 4717400 4572400 2523 1423 2709 5718;5719 4757 4757 1914 1 REDSPGPEVQPMDK ________________ PEVQPMDKQFLVCSIC K R E D K Q 0 1 0 2 0 1 2 1 0 0 0 1 1 0 3 1 0 0 0 1 0 0 14 1 1583.725 E9PMW5;E9PMK8;O75382 E9PMW5 4 17 TRIM3 Tripartite motif-containing protein 3 yes no 3 0.0019726 61.561 By matching By MS/MS 1 1 1185400 585730 599660 2524 669 2710 5720;5721 4758 4758 905 1 REEGPPPPSPDGASSDAEPEPPSGR TQPSTARRREEGPPPP EPEPPSGRTESPATAA R R E G R T 2 2 0 2 0 0 4 3 0 0 0 0 0 0 8 4 0 0 0 0 0 0 25 1 2514.1259 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 14 38 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 0.0014961 53.998 By MS/MS By MS/MS 2 2 6141000 3437900 2703100 2525 427 2711 5722;5723;5724;5725 4759;4760 4759 603;604 2 REEQTDTSDGESVTHHIR SRSGSRERREEQTDTS ESVTHHIRRLNQQPSQ R R E I R R 0 2 0 2 0 1 3 1 2 1 0 0 0 0 0 2 3 0 0 1 0 0 18 1 2095.9519 A2AB27;P36915 A2AB27 42 59 GNL1 Guanine nucleotide-binding protein-like 1 yes no 3 0.002741 53.96 By MS/MS By matching 1 1 10697000 4593900 6103300 2526 320 2712 5726;5727 4761 4761 460;3318;3319 1 RESCGSSVLTDFEGKDVATK SGSEQLVRRESCGSSV EGKDVATKVGEAWQDR R R E T K V 1 1 0 2 1 0 2 2 0 0 1 2 0 1 0 3 2 0 0 2 0 0 20 2 2185.0321 H0Y704;H7BZT5;O15231 H0Y704 222 241 ZNF185 Zinc finger protein 185 yes no 3 0.0092537 61.477 By MS/MS By matching 1 1 1511900 764000 747890 2527 841 2713 5728;5729 4762 4762 1136 1 RESLSTSSDLYK SASSSATRRESLSTSS STSSDLYKRSSSSLAP R R E Y K R 0 1 0 1 0 0 1 0 0 0 2 1 0 0 0 4 1 0 1 0 0 0 12 1 1384.6834 Q8TB72 Q8TB72 585 596 PUM2 Pumilio homolog 2 yes yes 2 0.0043765 77.185 By matching By MS/MS 1 1 2064100 831520 1232600 2528 1814 2714 5730;5731 4763 4763 2558 1 RESPSPAPKPR TKHKGTEKRESPSPAP PSPAPKPRKVELSESE K R E P R K 1 2 0 0 0 0 1 0 0 0 0 1 0 0 4 2 0 0 0 0 0 0 11 2 1220.6626 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 443 453 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.0029975 96.23 By MS/MS By MS/MS 2 3 172190000 69528000 102660000 2529 346 2715;2716 5732;5733;5734;5735;5736 4764;4765;4766;4767;4768;4769 4767 498;499 6 RFSEGVLQSPSQDQEK RPTSLVQRRFSEGVLQ SPSQDQEKLGGSLAAL R R F E K L 0 1 0 1 0 3 2 1 0 0 1 1 0 1 1 3 0 0 0 1 0 0 16 1 1833.8857 Q9C0C2 Q9C0C2 427 442 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2;3 0.0054228 66.326 By MS/MS By matching 2 2 5880300 2462300 3418100 2530 1985 2717 5737;5738;5739;5740 4770;4771 4771 2828 2 RFSLSPSLGPQASR LSPCPPQRRFSLSPSL SLGPQASRFLPSARSS R R F S R F 1 2 0 0 0 1 0 1 0 0 2 0 0 1 2 4 0 0 0 0 0 0 14 1 1501.8001 Q9NYF3 Q9NYF3 230 243 FAM53C Protein FAM53C yes yes 2 0.016392 48.177 By MS/MS By matching 1 1 4142400 1799900 2342400 2531 2072 2718 5741;5742 4772 4772 2962;2963 1 RFSMEDVSK FQRRQNQRRFSMEDVS FSMEDVSKRLSLPMDI R R F S K R 0 1 0 1 0 0 1 0 0 0 0 1 1 1 0 2 0 0 0 1 0 0 9 1 1097.5175 Q07002 Q07002 85 93 CDK18 Cyclin-dependent kinase 18 yes yes 2 0.020085 79.492 By MS/MS By MS/MS 1 1 4394100 2052000 2342000 2532 1468 2719 5743;5744 4773;4774 4774 1977 2 RGESLDNLDSPR VSLPGIMRRGESLDNL LDNLDSPRSNSWRQPP R R G P R S 0 2 1 2 0 0 1 1 0 0 2 0 0 0 1 2 0 0 0 0 0 0 12 1 1357.6586 E9PMS6;A0A0A0MTE2;E9PMT2;F8WD26;J3KP06;Q8WWI1 E9PMS6 1099 1110 LMO7 LIM domain only protein 7 yes no 2 0.0027065 88.706 By matching By MS/MS 1 1 4370200 2242500 2127700 2533 178 2720 5745;5746 4775 4775 251 1 RGFSDSGGGPPAK GRGSLLLRRGFSDSGG SGGGPPAKQRDLEGAV R R G A K Q 1 1 0 1 0 0 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 13 1 1231.5945 Q9H307;G3V5F0;G3V579 Q9H307 63 75 PNN Pinin yes no 2 0.0020371 74.649 By MS/MS 1 8904800 0 8904800 2534 2001 2721 5747 4776 4776 2862 1 RGNDPLTSSPGR ASSPAQRRRGNDPLTS PLTSSPGRSSRRTDAL R R G G R S 0 2 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 12 1 1255.6269 P49736;C9J013;C9JZ21;F8WDM3 P49736 19 30 MCM2 DNA replication licensing factor MCM2 yes no 2 8.2198E-133 195.71 By MS/MS By MS/MS 1 1 95232000 51602000 43630000 2535 1381 2722 5748;5749 4777;4778 4777 1844;1845 2 RGQEMLLSYSDK SRAVIVWKRGQEMLLS MLLSYSDKKAGPWLIL K R G D K K 0 1 0 1 0 1 1 1 0 0 2 1 1 0 0 2 0 0 1 0 0 0 12 1 1425.6922 H0Y9F6 H0Y9F6 65 76 ARSK yes yes 2 0.018896 42.789 By MS/MS 1 0 0 0 2536 858 2723 5750 4779 4779 1154;4182 1 RGSFSSENYWR VLLPTHRRRGSFSSEN FSSENYWRKSYESSED R R G W R K 0 2 1 0 0 0 1 1 0 0 0 0 0 1 0 3 0 1 1 0 0 0 11 1 1387.6269 K7ER58;Q6P6C2 K7ER58 18 28 ALKBH5 RNA demethylase ALKBH5 yes no 2;3 2.6854E-108 203.74 By MS/MS By MS/MS 2 2 14370000 13570000 800320 2537 1053 2724 5751;5752;5753;5754 4780;4781;4782 4782 1390;1391 3 RGSGDTSSLIDPDTSLSELR PLSGNSSRRGSGDTSS DTSLSELRDIYDLKDQ R R G L R D 0 2 0 3 0 0 1 2 0 1 3 0 0 0 1 5 2 0 0 0 0 0 20 1 2105.0237 C9JSU1;Q9Y608 C9JSU1 94 113 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2;3 0.0014084 81.788 By MS/MS 2 8817800 8817800 0 2538 479 2725 5755;5756 4783;4784 4783 668;3374 2 RGSLEMSSDGEPLSR SSATSGGRRGSLEMSS SDGEPLSRMDSEDSIS R R G S R M 0 2 0 1 0 0 2 2 0 0 2 0 1 0 1 4 0 0 0 0 0 0 15 1 1619.7573 Q6ZN18 Q6ZN18 204 218 AEBP2 Zinc finger protein AEBP2 yes yes 3 8.8438E-05 77.726 By MS/MS By MS/MS 1 1 1537100 967190 569940 2539 1697 2726 5757;5758 4785;4786 4786 2370 2 RGSLSNAGDPEIVK DESEEEGRRGSLSNAG AGDPEIVKSPSDPKQY R R G V K S 1 1 1 1 0 0 1 2 0 1 1 1 0 0 1 2 0 0 0 1 0 0 14 1 1441.7525 F5H7V1;B1AKJ5;O43847 F5H7V1 92 105 NRD1 Nardilysin yes no 2;3 0.0011353 74.786 By MS/MS By MS/MS 2 2 17311000 8077100 9234000 2540 357 2727 5759;5760;5761;5762 4787;4788;4789 4789 524 3 RGSPTTGFIEQK PTPGFSTRRGSPTTGF TTGFIEQKGSPTSAYP R R G Q K G 0 1 0 0 0 1 1 2 0 1 0 1 0 1 1 1 2 0 0 0 0 0 12 1 1319.6834 J3KPS2;Q6ZRV2 J3KPS2 617 628 FAM83H Protein FAM83H yes no 2 0.00044121 102.73 By MS/MS 1 2679800 0 2679800 2541 1004 2728 5763 4790 4790 1341 1 RGTGQSDDSDIWDDTALIK QEDSVLFRRGTGQSDD WDDTALIKAYDKAVAS R R G I K A 1 1 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 19 1 2091.9709 B4DP61;E7EQZ4;Q16637 B4DP61 23 41 SMN2;SMN1 Survival motor neuron protein yes no 3 0.0039818 51.029 By MS/MS By matching 1 1 6890000 3129500 3760500 2542 377 2729 5764;5765 4791 4791 539;540 1 RHASAPSHVQPSDSEK SQKSQPRRRHASAPSH VQPSDSEKNRTMLFQV R R H E K N 2 1 0 1 0 1 1 0 2 0 0 1 0 0 2 4 0 0 0 1 0 0 16 1 1731.8289 O60343 O60343 338 353 TBC1D4 TBC1 domain family member 4 yes yes 4 0.0087772 43.696 By MS/MS By matching 1 1 2049000 900220 1148800 2543 1138 2730 5766;5767 4792 4792 1515;1516 1 RHESEEGDSHR SSRSNSRRRHESEEGD SEEGDSHRRHKHKKSK R R H H R R 0 2 0 1 0 0 3 1 2 0 0 0 0 0 0 2 0 0 0 0 0 0 11 1 1337.5709 Q6UN15;H0Y8P7 Q6UN15 551 561 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 3 0.00057542 90.229 By MS/MS 1 1780100 1780100 0 2544 1690 2731 5768 4793 4793 2366 1 RHPDYSVVLLLR MFLYEYARRHPDYSVV YSVVLLLRLAKTYETT R R H L R L 0 2 0 1 0 0 0 0 1 0 3 0 0 0 1 1 0 0 1 2 0 0 12 1 1466.8358 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 361 372 ALB Serum albumin yes no 3 1.0596E-05 110.38 By MS/MS By MS/MS 1 1 6894800 4039500 2855400 + 2545 209 2732 5769;5770 4794;4795 4794 2 RHPTGTTPPVK SQNGCQIRRHPTGTTP TGTTPPVKKKPKLLNL R R H V K K 0 1 0 0 0 0 0 1 1 0 0 1 0 0 3 0 3 0 0 1 0 0 11 1 1189.6568 Q96ST3 Q96ST3 429 439 SIN3A Paired amphipathic helix protein Sin3a yes yes 3 0.010387 50.659 By MS/MS 1 563200 0 563200 2546 1931 2733 5771 4796 4796 3896 1 RHPYFYAPELLFFAK KYLYEIARRHPYFYAP PELLFFAKRYKAAFTE R R H A K R 2 1 0 0 0 0 1 0 1 0 2 1 0 3 2 0 0 0 2 0 0 0 15 1 1897.9879 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;H7C013 A0A0C4DGB6 169 183 ALB Serum albumin yes no 2;3 0.00012234 100.4 By MS/MS By MS/MS 2 2 21139000 11539000 9600400 + 2547 209 2734 5772;5773;5774;5775 4797;4798;4799 4797 3 RHSEVETDSK VGAGKRKRRHSEVETD SEVETDSKKKKMKLPE R R H S K K 0 1 0 1 0 0 2 0 1 0 0 1 0 0 0 2 1 0 0 1 0 0 10 1 1186.5578 Q9NX58 Q9NX58 274 283 LYAR Cell growth-regulating nucleolar protein yes yes 2 0.0042168 92.792 By MS/MS 1 1313600 0 1313600 2548 2066 2735 5776 4800 4800 2954 1 RHSIEKETPTNVR ERRQPPQRRHSIEKET KETPTNVRQFLPPSRQ R R H V R Q 0 2 1 0 0 0 2 0 1 1 0 1 0 0 1 1 2 0 0 1 0 0 13 2 1565.8274 J3KNG6;Q08AE8 J3KNG6 310 322 SPIRE1 Protein spire homolog 1 yes no 4 0.011382 58.461 By matching By MS/MS 1 1 2878100 1298400 1579600 2549 997 2736 5777;5778 4801 4801 1333 1 RHSLEVMNSMVR KHHGTVNKRHSLEVMN EVMNSMVRGMEAMTLK K R H V R G 0 2 1 0 0 0 1 0 1 0 1 0 2 0 0 2 0 0 0 2 0 0 12 1 1457.7231 Q15678 Q15678 640 651 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 3 0.0043285 58.461 By matching By MS/MS 1 1 1264300 654990 609290 2550 1564 2737 5779;5780 4802 4802 2160 1 RHSSDINHLVTQGR KTGGRGDRRHSSDINH NHLVTQGRESPEGSYT R R H G R E 0 2 1 1 0 1 0 1 2 1 1 0 0 0 0 2 1 0 0 1 0 0 14 1 1618.8288 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 332 345 FNBP1L Formin-binding protein 1-like yes no 4 0.0052439 50.188 By MS/MS 1 887150 887150 0 2551 6 2738 5781 4803 4803 5 1 RIDFIPVSPAPSPTR VEKSASPKRIDFIPVS SPAPSPTRGIGKQCFS K R I T R G 1 2 0 1 0 0 0 0 0 2 0 0 0 1 4 2 1 0 0 1 0 0 15 1 1651.9046 Q96E09 Q96E09 136 150 FAM122A Protein FAM122A yes yes 3 0.012103 44.577 By MS/MS 1 523020 523020 0 2552 1885 2739 5782 4804 4804 2659 1 RIDISPSTFR KKSPEIHRRIDISPST DISPSTFRKHGLAHDE R R I F R K 0 2 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 10 1 1190.6408 Q9Y2W1 Q9Y2W1 678 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 5.8618E-79 179.59 By MS/MS By MS/MS 2 2 46842000 20360000 26483000 2553 2146 2740 5783;5784;5785;5786 4805;4806;4807;4808 4807 3119 4 RIDISPSTLR QKSPEIHRRIDISPST DISPSTLRKHTRLAGE R R I L R K 0 2 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 10 1 1156.6564 Q9NYF8;E9PK91;E9PQN2;E9PKI6 Q9NYF8 654 663 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 1.6533E-51 169.58 By MS/MS By MS/MS 2 2 165420000 67387000 98032000 2554 2073 2741 5787;5788;5789;5790 4809;4810;4811;4812 4812 2970 4 RIDISPSTLRK QKSPEIHRRIDISPST ISPSTLRKHTRLAGEE R R I R K H 0 2 0 1 0 0 0 0 0 2 1 1 0 0 1 2 1 0 0 0 0 0 11 2 1284.7514 Q9NYF8;E9PK91;E9PQN2;E9PKI6 Q9NYF8 654 664 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0050266 79.337 By matching By MS/MS 1 1 4847400 2808600 2038700 2555 2073 2742 5791;5792 4813 4813 2970 1 RIIKNPMDFSTMR PRLVSGYRRIIKNPMD PMDFSTMRERLLRGGY R R I M R E 0 2 1 1 0 0 0 0 0 2 0 1 2 1 1 1 1 0 0 0 0 0 13 2 1607.8276 J3KPG5;F8VU39;Q9UIF9;A0A0C4DGI9 J3KPG5 1802 1814 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 0.018507 42.789 By MS/MS 1 332380 0 332380 2556 739 2743 5793 4814 4814 110 87 986 0 RIQPQPPDEDGDHSDKEDEQPQVVVLK EGPTVETKRIQPQPPD QPQVVVLKKGDLSVEE K R I L K K 0 1 0 5 0 4 3 1 1 1 1 2 0 0 4 1 0 0 0 3 0 0 27 2 3097.4952 Q96AT1 Q96AT1 37 63 KIAA1143 Uncharacterized protein KIAA1143 yes yes 4 0.0047643 51.398 By MS/MS By matching 1 1 10273000 4998700 5274400 2557 1874 2744 5794;5795 4815 4815 2647 1 RISMEDLNK CLRNRIHRRISMEDLN ISMEDLNKRLSLPADI R R I N K R 0 1 1 1 0 0 1 0 0 1 1 1 1 0 0 1 0 0 0 0 0 0 9 1 1104.5597 F5H6Z0;Q00537;F8VZY6;F8VQZ9 F5H6Z0 82 90 CDK17 Cyclin-dependent kinase 17 yes no 2 0.0065143 120.55 By MS/MS By MS/MS 1 1 5282900 2381100 2901800 2558 721 2745 5796;5797 4816;4817 4817 956 2 RISQSQPVR IIRNPQQRRISQSQPV ISQSQPVRGRDEEQDD R R I V R G 0 2 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 9 1 1069.5992 E7EMW7;O95071 E7EMW7 1541 1549 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.0047113 105.36 By MS/MS By MS/MS 1 1 13858000 6357000 7500600 2559 562 2746 5798;5799 4818;4819 4818 745 2 RISTSDILSEK DKEQNLTRRISTSDIL TSDILSEKKLGEDEEE R R I E K K 0 1 0 1 0 0 1 0 0 2 1 1 0 0 0 3 1 0 0 0 0 0 11 1 1247.6721 O60293 O60293 350 360 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 9.7793E-43 160.46 By MS/MS By MS/MS 1 1 11792000 5686800 6105400 2560 1135 2747 5800;5801 4820;4821 4821 1510 2 RKASPEPEGEAAGK NLAPTPRRRKASPEPE PEGEAAGKMTTEEQQQ R R K G K M 3 1 0 0 0 0 3 2 0 0 0 2 0 0 2 1 0 0 0 0 0 0 14 2 1425.7212 Q8IU81 Q8IU81 381 394 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2 0.022033 56.46 By MS/MS By matching 1 1 1484300 692410 791910 2561 1747 2748 5802;5803 4822 4822 2460 0 RKPEDVLDDDDAGSAPLK IIFIYEKRRKPEDVLD DAGSAPLKSSGQHQND R R K L K S 2 1 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 18 2 1939.9487 A0A087WUV8;P35613 A0A087WUV8 153 170 BSG Basigin yes no 3 0.0050593 64.589 By matching By MS/MS 1 1 5494200 2474600 3019700 2562 45 2749 5804;5805 4823 4823 60 1 RKPSPEPEGEVGPPK AVARTARKRKPSPEPE EGEVGPPKINGEAQPW K R K P K I 0 1 0 0 0 0 3 2 0 0 0 2 0 0 5 1 0 0 0 1 0 0 15 2 1602.8366 Q7Z5L9 Q7Z5L9 357 371 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.0045527 64.842 By MS/MS By MS/MS 1 1 9671400 4464200 5207300 2563 1718 2750 5806;5807 4824;4825 4825 2414 2 RKQDSYPQEAGGATGGNR DKDKPLKKRKQDSYPQ GGATGGNRPASQETGS K R K N R P 2 2 1 1 0 2 1 4 0 0 0 1 0 0 1 1 1 0 1 0 0 0 18 2 1890.8933 Q6KC79 Q6KC79 505 522 NIPBL Nipped-B-like protein yes yes 2 0.012987 42.095 By matching By MS/MS 1 1 829170 390620 438550 2564 1670 2751 5808;5809 4826 4826 2336;4377 1 RKQSSSEISLAVER EDEAWRQRRKQSSSEI EISLAVERARRRREEE R R K E R A 1 2 0 0 0 1 2 0 0 1 1 1 0 0 0 4 0 0 0 1 0 0 14 2 1588.8533 P48634 P48634 453 466 PRRC2A Protein PRRC2A yes yes 3 0.00064441 75.911 By matching By MS/MS 1 1 3925200 2318600 1606600 2565 1373 2752 5810;5811 4827 4827 1828;1829;1830 1 RKSFTSLYK TERKSTQKRKSFTSLY KSFTSLYKDRCSTGSP K R K Y K D 0 1 0 0 0 0 0 0 0 0 1 2 0 1 0 2 1 0 1 0 0 0 9 2 1128.6291 H0Y2V6;Q5SW79 H0Y2V6 920 928 CEP170 Centrosomal protein of 170 kDa yes no 3 0.0084266 85.924 By MS/MS By matching 1 1 1481800 785280 696510 2566 815 2753 5812;5813 4828 4828 1092 1 RKSLSDSESDDSK GKEKDGTKRKSLSDSE DSESDDSKSKKKRDAA K R K S K S 0 1 0 3 0 0 1 0 0 0 1 2 0 0 0 5 0 0 0 0 0 0 13 2 1452.6692 Q13185;S4R2Y4 Q13185 91 103 CBX3 Chromobox protein homolog 3 yes no 2;3 2.4074E-39 154.81 By MS/MS By MS/MS 2 2 37209000 17486000 19723000 2567 1494 2754;2755 5814;5815;5816;5817 4829;4830;4831 4831 2041;2042 3 RKSQVNGEAGSYEMTNQHVK NKQISRVRRKSQVNGE EMTNQHVKQNGKLEDN R R K V K Q 1 1 2 0 0 2 2 2 1 0 0 2 1 0 0 2 1 0 1 2 0 0 20 2 2262.0811 H0YMH7;Q05D32 H0YMH7 102 121 CTDSPL2 CTD small phosphatase-like protein 2 yes no 3 0.01942 49.306 By MS/MS By matching 1 1 2107400 1111400 995940 2568 898 2756 5818;5819 4832 4832 1205 1 RKTSDANETEDHLESLICK DGGQPHKRRKTSDANE HLESLICKVGEKSACS R R K C K V 1 1 1 2 1 0 3 0 1 1 2 2 0 0 0 2 2 0 0 0 0 0 19 2 2245.0645 F2Z2T1;Q09161 F2Z2T1 19 37 NCBP1 Nuclear cap-binding protein subunit 1 yes no 4 0.00030962 89.344 By MS/MS By MS/MS 1 1 3452300 1508900 1943400 2569 689 2757 5820;5821 4833;4834 4834 926;3462 2 RKVMDSDEDDDY TTTVKFNRRKVMDSDE DSDEDDDY________ R R K D Y - 0 1 0 5 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 12 2 1486.5882 K7EQA1;O14737 K7EQA1 76 87 PDCD5 Programmed cell death protein 5 yes no 2 3.1932E-07 114.87 By MS/MS By MS/MS 1 1 27000000 14777000 12223000 2570 1051 2758 5822;5823 4835;4836 4836 1388;4218 2 RLAAAEETAVSPR KRVWSLERRLAAAEET EETAVSPRKSPRPAGP R R L P R K 4 2 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 13 1 1369.7314 Q9BUH6 Q9BUH6 138 150 C9orf142 Protein PAXX yes yes 2;3 0.00073253 81.346 By MS/MS By MS/MS 2 2 14751000 8359300 6391300 2571 1963 2759 5824;5825;5826;5827 4837;4838 4838 2782 1 RLASTSDIEEKENR YVAPTIPRRLASTSDI DIEEKENRDSSSLRTS R R L N R D 1 2 1 1 0 0 3 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 14 2 1646.8224 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 504 517 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 3 0.00021252 97.081 By MS/MS By MS/MS 1 1 23983000 12870000 11113000 2572 1098 2760 5828;5829 4839;4840 4840 1463;3597 2 RLDSSCLESVK ESRNRVKRRLDSSCLE SSCLESVKQKCVKSCN R R L V K Q 0 1 0 1 1 0 1 0 0 0 2 1 0 0 0 3 0 0 0 1 0 0 11 1 1292.6395 F5GZ90;Q9NZJ0 F5GZ90 512 522 DTL Denticleless protein homolog yes no 2 0.0014794 102.97 By MS/MS By matching 1 1 12316000 5569300 6747000 2573 704 2761 5830;5831 4841 4841 940 1 RLEAEILALQMQRGR PVVEAENRRLEAEILA ALQMQRGRAPLGPQDL R R L G R A 2 3 0 0 0 2 2 1 0 1 3 0 1 0 0 0 0 0 0 0 0 0 15 2 1782.9887 F2Z395;Q96LX7 F2Z395 273 287 CCDC17 Coiled-coil domain-containing protein 17 yes no 2 0.019325 45.972 By MS/MS 1 0 0 0 2574 694 2762 5832 4842 4842 82 1 RLNHSPPQSSSR EREKKFSRRLNHSPPQ SPPQSSSRYRENRSRD R R L S R Y 0 2 1 0 0 1 0 0 1 0 1 0 0 0 2 4 0 0 0 0 0 0 12 1 1364.6909 A0A087X0H9;Q5T8P6 A0A087X0H9 123 134 RBM26 RNA-binding protein 26 yes no 3 0.010509 49.595 By MS/MS By MS/MS 1 1 32193000 12802000 19391000 2575 98 2763 5833;5834 4843;4844 4844 126 2 RLPSKELPDSSSPVPANNIR TIDTSRKKRLPSKELP PVPANNIRVIKNSIRL K R L I R V 1 2 2 1 0 0 1 0 0 1 2 1 0 0 4 4 0 0 0 1 0 0 20 2 2176.16 Q9BWT3;A0A0C4DH56 Q9BWT3 705 724 PAPOLG Poly(A) polymerase gamma yes no 3 0.013313 53.453 By MS/MS By matching 1 1 5142400 2831100 2311300 2576 1969 2764 5835;5836 4845 4845 2790 1 RLSCSELSLYQPLQNSSK SVQAEILKRLSCSELS QPLQNSSKEKNDKASW K R L S K E 0 1 1 0 1 2 1 0 0 0 4 1 0 0 1 5 0 0 1 0 0 0 18 1 2109.0525 Q12923 Q12923 934 951 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 3 0.019793 42.913 By MS/MS By matching 1 1 1097500 508100 589400 2577 1483 2765 5837;5838 4846 4846 2018;2019;2020 1 RLSDYSIGPNSK GKALADGKRLSDYSIG YSIGPNSKLNLVVKPL K R L S K L 0 1 1 1 0 0 0 1 0 1 1 1 0 0 1 3 0 0 1 0 0 0 12 1 1335.6783 Q5HY81;P11441 Q5HY81 55 66 UBL4A Ubiquitin-like protein 4A yes no 3 0.018949 42.568 By MS/MS 1 3097300 0 3097300 2578 1259 2766 5839 4847 4847 1663 1 RLSEGVEPWR GKPDLPKRRLSEGVEP SEGVEPWRGQLKKSPE R R L W R G 0 2 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 1 0 1 0 0 10 1 1227.636 C9K0F9;Q92794 C9K0F9 519 528 KAT6A Histone acetyltransferase;Histone acetyltransferase KAT6A yes no 2 0.0037858 89.403 By matching By MS/MS 1 1 6374000 2746200 3627800 2579 496 2767 5840;5841 4848 4848 686 1 RLSEQLAHTPTAFK IAAGDIRRRLSEQLAH AHTPTAFKRDPEDPSA R R L F K R 2 1 0 0 0 1 1 0 1 0 2 1 0 1 1 1 2 0 0 0 0 0 14 1 1597.8576 A0A0B4J1S8;Q9UBF8;F8W860 A0A0B4J1S8 521 534 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 0.0097491 47.68 By MS/MS 1 1051200 0 1051200 2580 192 2768 5842 4849 4849 274 1 RLSESLHVVDENKNESK SEPSKPARRLSESLHV DENKNESKLEREHKRR R R L S K L 0 1 2 1 0 0 3 0 1 0 2 2 0 0 0 3 0 0 0 2 0 0 17 2 1983.0021 Q8NFC6 Q8NFC6 633 649 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.0068732 58.98 By MS/MS 1 2681100 0 2681100 2581 1803 2769 5843 4850 4850 2535;2536 1 RLSITSLTGKNNK QKSPTTARRLSITSLT SLTGKNNKPNAGQIQE R R L N K P 0 1 2 0 0 0 0 1 0 1 2 2 0 0 0 2 2 0 0 0 0 0 13 2 1430.8205 G3V1S3;Q6ZUT9 G3V1S3 1109 1121 DENND5B DENN domain-containing protein 5B yes no 2 0.015063 43.958 By MS/MS 1 3537400 3537400 0 2582 783 2770 5844 4851 4851 117;118 1040 1 RLSLDSSCLDSSR SSGGLQSKRLSLDSSC SSCLDSSRDTDNGTPF K R L S R D 0 2 0 2 1 0 0 0 0 0 3 0 0 0 0 5 0 0 0 0 0 0 13 1 1494.7097 Q9BWT3;A0A0C4DH56 Q9BWT3 523 535 PAPOLG Poly(A) polymerase gamma yes no 2;3 0.012223 65.511 By MS/MS By MS/MS 2 2 8401500 3987500 4414000 2583 1969 2771 5845;5846;5847;5848 4852;4853;4854;4855 4854 2791 4 RLSLPADIR ISMEDLNKRLSLPADI LSLPADIRIPDGYLEK K R L I R I 1 2 0 1 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 9 1 1039.6138 F5H6Z0;Q00537;F8VZY6;F8VQZ9;E5RJM2;E5RGN0;A0A087WZU2;Q00536;E5RIY8;H0YBX5;E5RIU4 E5RJM2 91 99 CDK17;CDK16 Cyclin-dependent kinase 17;Cyclin-dependent kinase 16 no no 2 0.0060738 117.86 By MS/MS 1 5305600 5305600 0 2584 721;92 2772 5849 4856;4857 4857 112 2 RLSNVSLTGVSTIR NCSGVRRRRLSNVSLT LTGVSTIRTSSAELST R R L I R T 0 2 1 0 0 0 0 1 0 1 2 0 0 0 0 3 2 0 0 2 0 0 14 1 1501.8576 Q15139;F8WBA3 Q15139 203 216 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 3 0.017872 41.495 By MS/MS By MS/MS 1 1 923330 412460 510870 2585 1545 2773 5850;5851 4858;4859 4858 2131;2132 2 RLSPPSSSAASSYSFSDLNSTR FEYETQRRRLSPPSSS FSDLNSTRGDADMYDL R R L T R G 2 2 1 1 0 0 0 0 0 0 2 0 0 1 2 9 1 0 1 0 0 0 22 1 2316.0982 P50402 P50402 47 68 EMD Emerin yes yes 3 0.011781 41.256 By MS/MS By matching 1 1 2540100 1087000 1453100 2586 1389 2774 5852;5853 4860 4860 1872 1 RLSPRTGTPR LEQEPRGRRLSPRTGT SPRTGTPRTTAVSSNR R R L P R T 0 3 0 0 0 0 0 1 0 0 1 0 0 0 2 1 2 0 0 0 0 0 10 2 1139.6523 Q8N7P7 Q8N7P7 25 34 Uncharacterized protein FLJ40521 yes yes 2 0.012535 52.49 By matching By MS/MS 1 1 2351800 737200 1614600 2587 1782 2775 5854;5855 4861 4861 2505;3855;3856 1 RLSPSASPPR SSPPRKTRRLSPSASP SPSASPPRRRHRPSPP R R L P R R 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 0 0 0 10 1 1066.5883 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 382 391 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.0036453 76.24 By MS/MS By MS/MS 3 3 40830000 19732000 21098000 2588 346 2776;2777 5856;5857;5858;5859;5860;5861 4862;4863;4864;4865;4866;4867;4868;4869;4870;4871;4872 4863 500;501;502 11 RLSQPESAEK SSSSVQARRLSQPESA SQPESAEKHVTQRLQP R R L E K H 1 1 0 0 0 1 2 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1143.5884 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 650 659 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 4.2291E-13 142.39 By MS/MS By MS/MS 4 3 86626000 42863000 43763000 2589 576 2778 5862;5863;5864;5865;5866;5867;5868 4873;4874;4875;4876;4877;4878;4879 4873 768 7 RLSQRPTPEELEQR QIGNTLIRRLSQRPTP TPEELEQRNILQPKNE R R L Q R N 0 3 0 0 0 2 3 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 14 2 1737.9122 Q8IZ21 Q8IZ21 588 601 PHACTR4 Phosphatase and actin regulator 4 yes yes 3 0.015929 56.414 By matching By MS/MS 1 1 5769800 2725400 3044400 2590 1766 2779 5869;5870 4880 4880 2482 1 RLSQSDEDVIR GSSLKKKKRLSQSDED QSDEDVIRLIGQHLNG K R L I R L 0 2 0 2 0 1 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 11 1 1316.6684 H0Y917;Q9H7D7 H0Y917 111 121 WDR26 WD repeat-containing protein 26 yes no 2 0.00072414 106.55 By matching By MS/MS 1 1 18435000 8238300 10197000 2591 856 2780 5871;5872 4881 4881 1151;1152 1 RLSSLRASTSK QEQIAKRRRLSSLRAS SLRASTSKSESSQK__ R R L S K S 1 2 0 0 0 0 0 0 0 0 2 1 0 0 0 4 1 0 0 0 0 0 11 2 1204.6888 A2A3R5;P62753 A2A3R5 202 212 RPS6 40S ribosomal protein S6 yes no 2 0.0022547 69.92 By matching By MS/MS 1 1 57160000 25212000 31947000 2592 318 2781 5873;5874 4882 4882 455;456;457 1 RLSSSLNPSK DGISPKRRRLSSSLNP SSSLNPSKRAPKQTED R R L S K R 0 1 1 0 0 0 0 0 0 0 2 1 0 0 1 4 0 0 0 0 0 0 10 1 1087.5986 D6RIG7;Q13535 D6RIG7 114 123 ATR Serine/threonine-protein kinase ATR yes no 2 0.0037905 97.957 By MS/MS By MS/MS 1 1 4311600 2051200 2260400 2593 540 2782 5875;5876 4883;4884 4883 719;720 2 RLSSTSLASGHSVR NCSGARKRRLSSTSLA LASGHSVRLGTSESLP R R L V R L 1 2 0 0 0 0 0 1 1 0 2 0 0 0 0 5 1 0 0 1 0 0 14 1 1456.7746 B4DTS2;Q9BZL6;M0QZ82 B4DTS2 195 208 PRKD2 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2 yes no 3 0.00011432 88.781 By MS/MS By MS/MS 1 1 3135100 1589400 1545700 2594 380 2783 5877;5878 4885;4886;4887 4886 542;543;3343 3 RLSTHSPFR PRPSEWDKRLSTHSPF LSTHSPFRTLNINGQI K R L F R T 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 9 1 1099.5887 Q4VB86;P11171;A0A1B0GWG0 Q4VB86 465 473 EPB41 Protein 4.1 yes no 3 0.0028178 83.081 By MS/MS By MS/MS 1 1 4340700 1927500 2413200 2595 1257 2784 5879;5880 4888;4889 4888 1653;1654;3649 2 RLSTSPDVIQGHQPR RAQQQSQRRLSTSPDV VIQGHQPRDNHTDHGG R R L P R D 0 2 0 1 0 2 0 1 1 1 1 0 0 0 2 2 1 0 0 1 0 0 15 1 1689.8911 Q9Y385 Q9Y385 264 278 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 3 1.0545E-15 121.77 By MS/MS By MS/MS 1 1 16820000 9400000 7419800 2596 2150 2785 5881;5882 4890;4891 4891 3125;3976 2 RMSDEFVDSFKK QRYGRELRRMSDEFVD EFVDSFKKGLPRPKSA R R M K K G 0 1 0 2 0 0 1 0 0 0 0 2 1 2 0 2 0 0 0 1 0 0 12 2 1487.7079 Q92934;F5H3B1;F5H1R6 Q92934 116 127 BAD Bcl2-associated agonist of cell death yes no 3 0.0022722 71.286 By MS/MS By MS/MS 2 2 5396100 2819400 2576700 2597 1869 2786;2787 5883;5884;5885;5886 4892;4893;4894 4892 270 2640 3 RMSGEPIQTVESIR GYHSASNRRMSGEPIQ IQTVESIRVPGKGNRG R R M I R V 0 2 0 0 0 1 2 1 0 2 0 0 1 0 1 2 1 0 0 1 0 0 14 1 1601.8195 Q5VT52 Q5VT52 1097 1110 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.01223 41.227 By matching By MS/MS 1 1 1296300 578360 717960 2598 1644 2788 5887;5888 4895 4895 243 2298 1 RNEGVVGGEDYEEVDR SYAPRHSRRNEGVVGG EDYEEVDRYSRQGRVA R R N D R Y 0 2 1 2 0 0 4 3 0 0 0 0 0 0 0 0 0 0 1 3 0 0 16 1 1821.8129 H3BQQ2;Q86UK7 H3BQQ2 241 256 ZNF598 Zinc finger protein 598 yes no 3 0.00020726 84.653 By MS/MS By MS/MS 1 1 4182200 2192600 1989700 2599 922 2789 5889;5890 4896;4897 4896 4199 2 RNEGVVGGEDYEEVDRYSR SYAPRHSRRNEGVVGG EEVDRYSRQGRVARAG R R N S R Q 0 3 1 2 0 0 4 3 0 0 0 0 0 0 0 1 0 0 2 3 0 0 19 2 2228.0094 H3BQQ2;Q86UK7 H3BQQ2 241 259 ZNF598 Zinc finger protein 598 yes no 3 0.0030839 66.809 By matching By MS/MS 1 1 27751000 12810000 14941000 2600 922 2790 5891;5892 4898 4898 4199 1 RNLSYTCRSNR SFFKRSIRRNLSYTCR SYTCRSNRDCQIDQHH R R N N R D 0 3 2 0 1 0 0 0 0 0 1 0 0 0 0 2 1 0 1 0 0 0 11 2 1425.6895 P10588 P10588 86 96 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes yes 3 0.020974 43.184 By MS/MS By matching 1 1 1386200 678420 707730 2601 1251 2791 5893;5894 4899 4899 172;173 1649;1650 1 RNSCNVGGGGGGFK PGGGGGKRRNSCNVGG GGGGGGFKHPAFKRRR R R N F K H 0 1 2 0 1 0 0 6 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1365.6208 Q7L2J0 Q7L2J0 150 163 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 0.0006817 89.506 By MS/MS By MS/MS 1 1 8625500 3946800 4678700 2602 1703 2792 5895;5896 4900;4901 4901 2378 2 RNSFSENEK PKKKRGERRNSFSENE NSFSENEKHTHRIKDS R R N E K H 0 1 2 0 0 0 2 0 0 0 0 1 0 1 0 2 0 0 0 0 0 0 9 1 1109.5102 Q9HCG8 Q9HCG8 827 835 CWC22 Pre-mRNA-splicing factor CWC22 homolog yes yes 2 0.0029012 108.9 By MS/MS By MS/MS 1 1 5042200 2189400 2852700 2603 2030 2793 5897;5898 4902;4903 4902 2900 2 RNSFTPLSSSNTIR NQTPVRMRRNSFTPLS LSSSNTIRRPRNYSVG R R N I R R 0 2 2 0 0 0 0 0 0 1 1 0 0 1 1 4 2 0 0 0 0 0 14 1 1578.8114 O60825 O60825 464 477 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 3 0.0038207 55.724 By MS/MS By matching 1 1 2994100 1463800 1530400 2604 1147 2794 5899;5900 4904 4904 1526;3614 1 RNSLEGYSR SPSKSSDRRNSLEGYS NSLEGYSRSVRSRSGE R R N S R S 0 2 1 0 0 0 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 9 1 1080.5312 Q8NDT2 Q8NDT2 560 568 RBM15B Putative RNA-binding protein 15B yes yes 2 0.020429 80.318 By matching By MS/MS 1 1 2920900 1581900 1339100 2605 1800 2795 5901;5902 4905 4905 2531 1 RNSLTGEEGQLAR PRRAGALRRNSLTGEE GEEGQLARVSNWPLYC R R N A R V 1 2 1 0 0 1 2 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 13 1 1429.7274 Q9BX95 Q9BX95 110 122 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 3 1.0204E-05 103.11 By MS/MS By MS/MS 1 1 4753800 2248800 2505100 2606 1972 2796 5903;5904 4906;4907 4907 2799;3918 2 RNSNSPPSPSSMNQR NQVHSTTRRNSNSPPS SPSSMNQRRLGPREVG R R N Q R R 0 2 3 0 0 1 0 0 0 0 0 0 1 0 3 5 0 0 0 0 0 0 15 1 1657.7591 Q7Z5L9 Q7Z5L9 453 467 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.021142 43.81 By matching By MS/MS 1 1 2660300 1250300 1410000 2607 1718 2797 5905;5906 4908 4908 2416;2417;2418 1 RNSRTEEPTVASESVENGHR EKSKIPGRRNSRTEEP ESVENGHRKRSSRPAS R R N H R K 1 3 2 0 0 0 4 1 1 0 0 0 0 0 1 3 2 0 0 2 0 0 20 2 2254.0686 A0A0D9SFT8;F6M2K2;Q14686 A0A0D9SFT8 153 172 NCOA6 Nuclear receptor coactivator 6 yes no 4 0.0016424 63.894 By matching By MS/MS 1 1 8630900 2892400 5738500 2608 236 2798 5907;5908 4909 4909 40 343;3301 1 RNSSEASSGDFLDLK LESSGLQRRNSSEASS SGDFLDLKGEGDIHEN R R N L K G 1 1 1 2 0 0 1 1 0 0 2 1 0 1 0 4 0 0 0 0 0 0 15 1 1624.7693 J3KSH8;J3KT51;Q9UK76 J3KSH8 39 53 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 3 2.5814E-24 139.78 By MS/MS By MS/MS 1 1 14863000 7924100 6939400 2609 1018 2799 5909;5910 4910;4911 4911 1355;1356 2 RNSTTFPSR QAEAPSARRNSTTFPS NSTTFPSRHGLLLPAS R R N S R H 0 2 1 0 0 0 0 0 0 0 0 0 0 1 1 2 2 0 0 0 0 0 9 1 1064.5363 Q96E09 Q96E09 60 68 FAM122A Protein FAM122A yes yes 2 0.0062617 122.18 By MS/MS By MS/MS 1 1 7638300 3676600 3961700 2610 1885 2800 5911;5912 4912;4913 4912 2660 2 RPAAAAAAGSASPR PGRKGSGKRPAAAAAA AAGSASPRSWDEAEAQ K R P P R S 7 2 0 0 0 0 0 1 0 0 0 0 0 0 2 2 0 0 0 0 0 0 14 1 1252.6636 Q96S55 Q96S55 142 155 WRNIP1 ATPase WRNIP1 yes yes 2 0.00052138 91.845 By MS/MS By MS/MS 1 1 18942000 9646400 9295500 2611 1928 2801 5913;5914 4914;4915 4915 2722 2 RPASPSSPEHLPATPAESPAQR LNKLKSPKRPASPSSP PAESPAQRFEARIEDG K R P Q R F 4 2 0 0 0 1 2 0 1 0 1 0 0 0 6 4 1 0 0 0 0 0 22 1 2282.1404 Q9H7L9 Q9H7L9 231 252 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 3 0.0048466 52.464 By MS/MS 1 10273000 0 10273000 2612 2016 2802 5915 4916 4916 2882;2883 1 RPASPYGEADGEVAMVTSR EFERMSSKRPASPYGE EVAMVTSRQKVEEEES K R P S R Q 3 2 0 1 0 0 2 2 0 0 0 0 1 0 2 2 1 0 1 2 0 0 19 1 1991.9371 G3V0H1;F5GWL1;F5H876;I3L0A5;F5H0I3;P35711 G3V0H1 18 36 SOX5 Transcription factor SOX-5 yes no 3 0.0026855 50.938 By MS/MS By matching 1 1 1096600 532560 564010 2613 698 2803 5916;5917 4917 4917 84 935 1 RPASVSSSAAVEHEQR PTDLGAHKRPASVSSS AAVEHEQREAAAKEKQ K R P Q R E 3 2 0 0 0 1 2 0 1 0 0 0 0 0 1 4 0 0 0 2 0 0 16 1 1709.8445 Q7Z5L9 Q7Z5L9 237 252 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 1.5897E-18 115.02 By MS/MS By MS/MS 1 1 20810000 10710000 10101000 2614 1718 2804 5918;5919 4918;4919 4918 2419;2420 2 RPCFSALEVDETYVPK CTESLVNRRPCFSALE VDETYVPKEFNAETFT R R P P K E 1 1 0 1 1 0 2 0 0 0 1 1 0 1 2 1 1 0 1 2 0 0 16 1 1909.9244 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 509 524 ALB Serum albumin yes no 3 0.00095348 80.534 By MS/MS By matching 1 1 2080200 1208100 872100 + 2615 209 2805 5920;5921 4920 4920 1 RPDDVPLSLSPSKR RARLAALKRPDDVPLS LSLSPSKRACASPSAQ K R P K R A 0 2 0 2 0 0 0 0 0 0 2 1 0 0 3 3 0 0 0 1 0 0 14 2 1565.8526 F8WDB4;Q9UFC0 F8WDB4 82 95 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 0.00039892 85.203 By MS/MS By matching 1 1 6663700 3941200 2722400 2616 768 2806 5922;5923 4921 4921 1025 1 RPDPDSDEDEDYER HEASGFARRPDPDSDE DEDEDYERERRKRSMG R R P E R E 0 2 0 5 0 0 3 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 14 1 1736.6762 Q5W011;Q5W010;H0Y6J6;Q5W012;Q96I25 Q5W011 150 163 RBM17 Splicing factor 45 yes no 2 8.2836E-28 141.55 By MS/MS By MS/MS 1 1 14168000 7822500 6345300 2617 838 2807 5924;5925 4922;4923;4924;4925;4926 4925 1130 5 RPDPDSDEDEDYERER HEASGFARRPDPDSDE DEDYERERRKRSMGGA R R P E R R 0 3 0 5 0 0 4 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 16 2 2021.8199 Q5W011;Q5W010;H0Y6J6;Q5W012;Q96I25 Q5W011 150 165 RBM17 Splicing factor 45 yes no 3 0.0014202 76.761 By MS/MS By MS/MS 1 1 27708000 12451000 15257000 2618 838 2808 5926;5927 4927;4928;4929 4927 1130 3 RPEGPGAQAPSSPR LTDSGPERRPEGPGAQ AQAPSSPRVTEAPCYP R R P P R V 2 2 0 0 0 1 1 2 0 0 0 0 0 0 4 2 0 0 0 0 0 0 14 1 1405.7062 P40222 P40222 504 517 TXLNA Alpha-taxilin yes yes 2;3 6.8955E-37 151.11 By MS/MS By MS/MS 2 2 58683000 32797000 25886000 2619 1348 2809 5928;5929;5930;5931 4930;4931;4932;4933;4934 4934 1770;1771 5 RPESPSEISPIK TWNSQFGKRPESPSEI PSEISPIKGSVRTGLF K R P I K G 0 1 0 0 0 0 2 0 0 2 0 1 0 0 3 3 0 0 0 0 0 0 12 1 1338.7143 Q7Z5K2 Q7Z5K2 218 229 WAPAL Wings apart-like protein homolog yes yes 2 0.0062821 60.196 By MS/MS By MS/MS 1 1 3943200 1678000 2265200 2620 1717 2810 5932;5933 4935;4936 4936 2410;2411 2 RPGAPSLSPAPR PPPARSPRRPGAPSLS PSLSPAPRSGELGLPG R R P P R S 2 2 0 0 0 0 0 1 0 0 1 0 0 0 4 2 0 0 0 0 0 0 12 1 1204.6677 Q5QP82 Q5QP82 56 67 DCAF10 DDB1- and CUL4-associated factor 10 yes yes 2 0.021076 60.401 By MS/MS By MS/MS 1 1 3475300 1974600 1500700 2621 1613 2811 5934;5935 4937;4938 4938 2241;2242 2 RPGCTFTFKNK KTTHFHCRRPGCTFTF CTFTFKNKCDIEKHKS R R P N K C 0 1 1 0 1 0 0 1 0 0 0 2 0 2 1 0 2 0 0 0 0 0 11 2 1354.6816 Q86V15 Q86V15 614 624 CASZ1 Zinc finger protein castor homolog 1 yes yes 2 0.008987 65.465 By MS/MS 1 3353400 3353400 0 2622 1729 2812 5936 4939 4939 3840 1 RPGFSPTSHR FQPSSPTRRPGFSPTS GFSPTSHRLLPTP___ R R P H R L 0 2 0 0 0 0 0 1 1 0 0 0 0 1 2 2 1 0 0 0 0 0 10 1 1140.5788 Q8WUA4;H0Y4Q6 Q8WUA4 897 906 GTF3C2 General transcription factor 3C polypeptide 2 yes no 3 0.0023404 68.463 By MS/MS By MS/MS 1 1 2697400 1202800 1494500 2623 1832 2813 5937;5938 4940;4941 4940 2581 2 RPGNSTVTSSPPVTPK DKAIKTPKRPGNSTVT SSPPVTPKKLFTSPLC K R P P K K 0 1 1 0 0 0 0 1 0 0 0 1 0 0 4 3 3 0 0 2 0 0 16 1 1623.858 Q7Z2Z1 Q7Z2Z1 1294 1309 TICRR Treslin yes yes 2 0.010857 49.559 By MS/MS By matching 1 1 2385600 1322300 1063200 2624 1710 2814 5939;5940 4942 4942 3831;3832 1 RPGPGTLYDVPR YDVPPGLRRPGPGTLY GTLYDVPRERVLPPEV R R P P R E 0 2 0 1 0 0 0 2 0 0 1 0 0 0 3 0 1 0 1 1 0 0 12 1 1326.7044 H3BN62;P56945 H3BN62 208 219 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 3 0.00037394 84.352 By MS/MS By MS/MS 1 1 1536500 975790 560710 2625 910 2815 5941;5942 4943;4944 4943 4195 2 RPILQLSPPGPR KSRAVPGRRPILQLSP QLSPPGPRGSTPGRDP R R P P R G 0 2 0 0 0 1 0 1 0 1 2 0 0 0 4 1 0 0 0 0 0 0 12 1 1329.7881 Q8N3X1;F5GXL1 Q8N3X1 12 23 FNBP4 Formin-binding protein 4 yes no 3 0.017337 43.861 By MS/MS By matching 2 2 3010500 1364900 1645600 2626 1777 2816 5943;5944;5945;5946 4945;4946 4945 2498 2 RPKEEEWDPEYTPK NSNTTFQKRPKEEEWD WDPEYTPKSKKYFLHD K R P P K S 0 1 0 1 0 0 4 0 0 0 0 2 0 0 3 0 1 1 1 0 0 0 14 2 1802.8475 Q9NYF8;H0YF14 Q9NYF8 829 842 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0023206 70.68 By matching By MS/MS 1 1 2734300 1309300 1425100 2627 2073 2817 5947;5948 4947 4947 3944;4448 1 RPLDSPEAEELPAMK NDENFLGKRPLDSPEA AEELPAMKRPRLLSTK K R P M K R 2 1 0 1 0 0 3 0 0 0 2 1 1 0 3 1 0 0 0 0 0 0 15 1 1681.8345 Q5VWG9 Q5VWG9 179 193 TAF3 Transcription initiation factor TFIID subunit 3 yes yes 2 0.010502 55.213 By MS/MS 1 613330 0 613330 2628 1652 2818 5949 4948 4948 244 2310 1 RPMEEDGEEKSPSK TYAITPMKRPMEEDGE GEEKSPSKKKKKIQKK K R P S K K 0 1 0 1 0 0 4 1 0 0 0 2 1 0 2 2 0 0 0 0 0 0 14 2 1617.7305 Q12906 Q12906 372 385 ILF3 Interleukin enhancer-binding factor 3 yes yes 2;3 9.3352E-09 109.55 By MS/MS By MS/MS 3 3 121090000 54078000 67010000 2629 1482 2819;2820 5950;5951;5952;5953;5954;5955 4949;4950;4951;4952;4953;4954;4955 4951 206 2016 7 RPMSSPEMK SGTKPANKRPMSSPEM PMSSPEMKSAPKKSKA K R P M K S 0 1 0 0 0 0 1 0 0 0 0 1 2 0 2 2 0 0 0 0 0 0 9 1 1061.4998 P51610;A6NEM2;H7C1C4 P51610 2016 2024 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.0044323 111.86 By MS/MS By MS/MS 1 2 8454200 2100700 6353500 2630 1394 2821;2822 5956;5957;5958 4956;4957;4958;4959 4958 184 1877;1878 4 RPPSPDVIVLSDNEQPSSPR HSDMKSERRPPSPDVI NEQPSSPRVNGLTTVA R R P P R V 0 2 1 2 0 1 1 0 0 1 1 0 0 0 5 4 0 0 0 2 0 0 20 1 2189.1077 Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4 97 116 GATAD2A Transcriptional repressor p66-alpha yes no 3 0.0037486 56.9 By MS/MS By matching 1 1 5386100 3052200 2333900 2631 1744 2823 5959;5960 4960 4960 2453;2454 1 RPPSPEPSTK QEEEERKRRPPSPEPS PSPEPSTKVSEEAESQ R R P T K V 0 1 0 0 0 0 1 0 0 0 0 1 0 0 4 2 1 0 0 0 0 0 10 1 1094.572 A0A087WUZ3;Q01082 A0A087WUZ3 2101 2110 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2;3 5.1908E-05 125.03 By MS/MS By MS/MS 2 2 32241000 16252000 15989000 2632 49 2824 5961;5962;5963;5964 4961;4962;4963;4964;4965;4966;4967 4966 66 7 RPPSVGDVFHGISK SQFRVSSKRPPSVGDV DVFHGISKEDHRHSAP K R P S K E 0 1 0 1 0 0 0 2 1 1 0 1 0 1 2 2 0 0 0 2 0 0 14 1 1494.7943 E7EUR8;A0A1B0GVL4;P78312;D6RFZ4 E7EUR8 493 506 FAM193A Protein FAM193A yes no 3 0.016697 50.659 By MS/MS 1 0 0 0 2633 299 2825 5965 4968 4968 427 1 RPPTPCSDPER LDLTKKGKRPPTPCSD TPCSDPERKRFRFNSE K R P E R K 0 2 0 1 1 0 1 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 11 1 1310.6037 Q9BW71 Q9BW71 81 91 HIRIP3 HIRA-interacting protein 3 yes yes 2 6.9314E-05 118.08 By MS/MS By MS/MS 2 2 11600000 6350500 5249100 2634 1967 2826;2827 5966;5967;5968;5969 4969;4970;4971;4972 4971 2788;3917 4 RPQLYYETSIHAIKNMR VKDFPLRRRPQLYYET IHAIKNMRRKMEDKHV R R P M R R 1 2 1 0 0 1 1 0 1 2 1 1 1 0 1 1 1 0 2 0 0 0 17 2 2119.0997 Q8WY54 Q8WY54 234 250 PPM1E Protein phosphatase 1E yes yes 3 0.0057909 44.807 By MS/MS 1 0 0 0 2635 1843 2828 5970 4973 4973 259;436 263 4404 1 RPSPQPSPR SYSPVERRRPSPQPSP PSPQPSPRDQQSSSSE R R P P R D 0 2 0 0 0 1 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 9 1 1020.5465 Q9UQ35;I3L4U6 Q9UQ35 2700 2708 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 0.0019505 94.363 By MS/MS By MS/MS 2 1 5719700 5719700 0 2636 2134 2829 5971;5972;5973 4974;4975;4976 4974 3079;3080 3 RPSQEQSASASSGQPQAPLNR EKAEERPRRPSQEQSA QPQAPLNRERPESPMV R R P N R E 3 2 1 0 0 4 1 1 0 0 1 0 0 0 3 5 0 0 0 0 0 0 21 1 2195.0679 A0A0A0MT60;Q5T1M5 A0A0A0MT60 979 999 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 3 5.7342E-18 111.63 By MS/MS By MS/MS 1 1 10950000 5373600 5576700 2637 174 2830 5974;5975 4977;4978 4978 241 2 RPSSTSVPLGDK KNRDGGERRPSSTSVP TSVPLGDKGLGKRLEF R R P D K G 0 1 0 1 0 0 0 1 0 0 1 1 0 0 2 3 1 0 0 1 0 0 12 1 1242.6568 I3L2T8;I3L533;I3L2R9;Q9NXR1 I3L2T8 97 108 NDE1 Nuclear distribution protein nudE homolog 1 yes no 2 0.019582 60.901 By matching By MS/MS 1 1 1848800 682770 1166000 2638 989 2831 5976;5977 4979 4979 1327;3556 1 RPSVGSQSNQAGQGK PGVFLTQRRPSVGSQS SNQAGQGKRPKKGLAT R R P G K R 1 1 1 0 0 3 0 3 0 0 0 1 0 0 1 3 0 0 0 1 0 0 15 1 1499.7441 H0Y3N9;Q9UPP1 H0Y3N9 887 901 PHF8 Histone lysine demethylase PHF8 yes no 2 1.531E-22 137.27 By MS/MS By MS/MS 1 1 3488400 1647000 1841400 2639 819 2832 5978;5979 4980;4981 4981 1103 1 RQDSDLVQCGVTSPSSAEATGK HSVIQLARRQDSDLVQ SSAEATGKLAVDTFPA R R Q G K L 2 1 0 2 1 2 1 2 0 0 1 1 0 0 1 4 2 0 0 2 0 0 22 1 2292.0652 Q9HC52 Q9HC52 253 274 CBX8 Chromobox protein homolog 8 yes yes 3 0.013345 40.197 By MS/MS 1 1373100 0 1373100 2640 2027 2833 5980 4982 4982 3935 1 RQIREYQLYSR AMTDQLSRRQIREYQL REYQLYSRTSGKHVQV R R Q S R T 0 3 0 0 0 2 1 0 0 1 1 0 0 0 0 1 0 0 2 0 0 0 11 2 1510.8005 O60258 O60258 50 60 FGF17 Fibroblast growth factor 17 yes yes 2 0.016967 40.377 By MS/MS 1 0 0 0 2641 1132 2834 5981 4983 4983 1506;4244 1 RQSIPEEFK PDGALAVRRQSIPEEF QSIPEEFKGSTVVELM R R Q F K G 0 1 0 0 0 1 2 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 9 1 1132.5877 F5H4N6;Q9Y3R0;F5H3G9 F5H4N6 41 49 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.002363 96.604 By MS/MS By MS/MS 1 1 4815200 1978300 2836900 2642 715 2835 5982;5983 4984;4985 4985 950 2 RQSPEPSPVTLGR ESKRRCRKRQSPEPSP PSPVTLGRRSSGRQGG K R Q G R R 0 2 0 0 0 1 1 1 0 0 1 0 0 0 3 2 1 0 0 1 0 0 13 1 1422.7579 Q9NRL2 Q9NRL2 1411 1423 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 3 0.00011801 81.346 By MS/MS By MS/MS 1 1 2710900 1260100 1450800 2643 2048 2836 5984;5985 4986;4987 4986 2926 2 RQSPLPPQK ________________ QSPLPPQKKKPRPPPA K R Q Q K K 0 1 0 0 0 2 0 0 0 0 1 1 0 0 3 1 0 0 0 0 0 0 9 1 1049.5982 B2REB7;Q01105 B2REB7 5 13 SET Protein SET yes no 2 0.0043863 114.71 By MS/MS 1 4731600 4731600 0 2644 365 2837 5986 4988 4988 530 1 RQSPLPPQKK ________________ SPLPPQKKKPRPPPAL K R Q K K K 0 1 0 0 0 2 0 0 0 0 1 2 0 0 3 1 0 0 0 0 0 0 10 2 1177.6931 B2REB7;Q01105 B2REB7 5 14 SET Protein SET yes no 2 0.021783 103.21 By matching By MS/MS 1 1 3390300 1598700 1791600 2645 365 2838 5987;5988 4989 4989 530 1 RQSPSPSTRPIR GASSSPQRRQSPSPST SPSTRPIRRVSRTPEP R R Q I R R 0 3 0 0 0 1 0 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 12 2 1380.7586 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 720 731 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.00081361 90.754 By MS/MS By MS/MS 1 1 15314000 8616200 6697700 2646 346 2839 5989;5990 4990;4991 4990 503;504;3328 2 RQSVGDFVSGALNK PGEYKRKRRQSVGDFV FVSGALNKFKPNRTPS R R Q N K F 1 1 1 1 0 1 0 2 0 0 1 1 0 1 0 2 0 0 0 2 0 0 14 1 1476.7685 H3BR51;Q6P4F7 H3BR51 283 296 ARHGAP11A Rho GTPase-activating protein 11A yes no 2 0.021615 56.793 By matching By MS/MS 1 1 1744300 792360 951970 2647 924 2840 5991;5992 4992 4992 1234 1 RRASAPISQWSSSR VFICLSRRRRASAPIS ISQWSSSRRSRSSYTH R R R S R R 2 3 0 0 0 1 0 0 0 1 0 0 0 0 1 5 0 1 0 0 0 0 14 2 1587.823 H0YDV5;Q8N699 H0YDV5 78 91 MYCT1 Myc target protein 1 yes no 2 0.0076727 48.284 By matching By MS/MS 1 1 88719000 44936000 43783000 2648 877 2841 5993;5994 4993 4993 393 1180;1181;1182 1 RRDSDGVDGFEAEGK NIHNNRKRRRDSDGVD DGFEAEGKKDKKDYDN R R R G K K 1 2 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 15 2 1636.7441 Q96KR1 Q96KR1 1051 1065 ZFR Zinc finger RNA-binding protein yes yes 3 0.00018051 81.185 By MS/MS By MS/MS 1 1 17822000 9083400 8738200 2649 1904 2842 5995;5996 4994;4995 4995 2701 2 RRPSPQPSPR LSYSPVERRRPSPQPS PSPQPSPRDQQSSSSE R R R P R D 0 3 0 0 0 1 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 10 2 1176.6476 Q9UQ35;I3L4U6 Q9UQ35 2699 2708 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0089384 76.326 By matching By MS/MS 1 1 21903000 11294000 10609000 2650 2134 2843 5997;5998 4996 4996 3079;3080 1 RRSIQDLTVTGTEPGQVSSR TTGNGQPRRRSIQDLT EPGQVSSRSSSPSVRM R R R S R S 0 3 0 1 0 2 1 2 0 1 1 0 0 0 1 3 3 0 0 2 0 0 20 2 2186.1404 Q9UG54;O43318 Q9UG54 91 110 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 3 0.003571 69.256 By MS/MS By MS/MS 1 1 9983000 6813900 3169100 2651 1120 2844 5999;6000 4997;4998 4997 1492 2 RRSPPPGPDGHAK QQLEKKQRRRSPPPGP PGPDGHAKKMRPGEAT R R R A K K 1 2 0 1 0 0 0 2 1 0 0 1 0 0 4 1 0 0 0 0 0 0 13 2 1370.7167 P57081 P57081 389 401 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 3 0.0070687 68.283 By MS/MS By matching 1 1 8400800 3399100 5001600 2652 1418 2845 6001;6002 4999 4999 1907 1 RRSPSPAPPPR PSPPPTRRRRSPSPAP PSPAPPPRRRRTPTPP R R R P R R 1 3 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 11 2 1216.6789 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 567 577 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.0037611 85.287 By MS/MS By matching 1 1 28778000 13239000 15539000 2653 346 2846 6003;6004 5000 5000 505;506 1 RRSPSPYYSR DYYSRSYRRRSPSPYY SPSPYYSRGGYRSRSR R R R S R G 0 3 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 2 0 0 0 10 2 1267.6422 H7BXF3;Q13595;P62995 H7BXF3 101 110 TRA2B;TRA2A Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta yes no 2;3 0.0028844 76.01 By MS/MS By MS/MS 2 3 53389000 25461000 27929000 2654 939 2847 6005;6006;6007;6008;6009 5001;5002;5003 5003 1264;1265;4202 3 RRSQSIEQESQEK DQSDKHDRRRSQSIEQ IEQESQEKQHKNKDET R R R E K Q 0 2 0 0 0 3 3 0 0 1 0 1 0 0 0 3 0 0 0 0 0 0 13 2 1603.7914 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 414 426 PRPF38B Pre-mRNA-splicing factor 38B yes no 3 0.0071738 69.229 By MS/MS 1 4252100 0 4252100 2655 147 2848 6010 5004 5004 199;200 1 RRTPSPPPR RTPTPPPRRRTPSPPP RTPSPPPRRRSPSPRR R R R P R R 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 9 2 1062.6047 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 588 596 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.0057324 82.505 By MS/MS By MS/MS 2 2 52776000 29277000 23499000 2656 346 2849 6011;6012;6013;6014 5005;5006;5007;5008 5005 507;3329 4 RRTPTPPPR SPAPPPRRRRTPTPPP RTPTPPPRRRTPSPPP R R R P R R 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4 0 2 0 0 0 0 0 9 2 1076.6203 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 579 587 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.021596 54.023 By matching By MS/MS 1 1 14303000 8212300 6091100 2657 346 2850 6015;6016 5009 5009 3330;3331 1 RSASASHQADIK GRPPKSARRSASASHQ ASHQADIKEARREVEV R R S I K E 3 1 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 12 1 1269.6426 C9JXK0;Q14739 C9JXK0 96 107 LBR Lamin-B receptor yes no 3 0.010812 49.223 By MS/MS 1 18609000 18609000 0 2658 488 2851 6017 5010 5010 674;675 1 RSASPDDDLGSSNWEAADLGNEER ESHPHGVKRSASPDDD ADLGNEERKQKFLRLM K R S E R K 3 2 2 4 0 0 3 2 0 0 2 0 0 0 1 4 0 1 0 0 0 0 24 1 2590.1168 E9PM92;O00193;E9PQA1 E9PM92 14 37 C11orf58;SMAP Small acidic protein yes no 3 0.0076023 43.156 By matching By MS/MS 1 1 51971000 22767000 29204000 2659 666 2852 6018;6019 5011 5011 899 1 RSASPDDDLGSSNWEAADLGNEERK ESHPHGVKRSASPDDD DLGNEERKQKFLRLMG K R S R K Q 3 2 2 4 0 0 3 2 0 0 2 1 0 0 1 4 0 1 0 0 0 0 25 2 2718.2117 E9PM92;O00193;E9PQA1 E9PM92 14 38 C11orf58;SMAP Small acidic protein yes no 3 0.021405 46.22 By matching By MS/MS 1 1 6895400 3093000 3802400 2660 666 2853 6020;6021 5012 5012 899 1 RSDSASSEPVGIYQGFEKK QVTQRASRRSDSASSE IYQGFEKKTGVAGEDM R R S K K T 1 1 0 1 0 1 2 2 0 1 0 2 0 1 1 4 0 0 1 1 0 0 19 2 2084.0174 Q05655 Q05655 301 319 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 3 0.0029269 55.907 By MS/MS 1 1376800 1376800 0 2661 1465 2854 6022 5013 5013 1974;1975;4329 1 RSDSVSASER PEANRGLRRSDSVSAS DSVSASERAGPSRARH R R S E R A 1 2 0 1 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 1 0 0 10 1 1092.516 O43719 O43719 384 393 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.010451 81.278 By MS/MS By MS/MS 1 1 22171000 9819200 12352000 2662 1127 2855 6023;6024 5014;5015 5015 1503 2 RSEACPCQPDSGSPLPAEEEK MKRSIEGRRSEACPCQ PLPAEEEKRLSAESGL R R S E K R 2 1 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 21 1 2343.0107 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 411 431 SCRIB Protein scribble homolog yes no 3 0.0011815 63.706 By MS/MS By MS/MS 1 1 6689500 3897500 2792000 2663 245 2856 6025;6026 5016;5017 5016 355;356 2 RSLGSTDFSPMFNIQSNAHKK SQHRQACRRSLGSTDF IQSNAHKKEKDSTLFT R R S K K E 1 1 2 1 0 1 0 1 1 1 1 2 1 2 1 4 1 0 0 0 0 0 21 2 2364.1645 Q5JVX6;S4R3Z8;F2Z2X7 Q5JVX6 158 178 C1orf141 yes no 3 0.0023073 54.103 By MS/MS 1 14643000 0 14643000 2664 1610 2857 6027 5018 5018 217;218;425 2237;2238;3788 1 RSLTNSHLEK FISDRESRRSLTNSHL LTNSHLEKKKCDEYIP R R S E K K 0 1 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 10 1 1183.6309 F8VX12;F8VX04;Q9H2H9 F8VX12 51 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 3 0.005257 59.265 By MS/MS 1 5702800 0 5702800 2665 746 2858 6028 5019 5019 989;3480 1 RSLVYYLK RKRLPPVKRSLVYYLK RSLVYYLKNREVRLQN K R S L K N 0 1 0 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 2 1 0 0 8 1 1040.6019 X6RL26;X6RBJ8;Q5T6F0 X6RL26 23 30 DCAF12 DDB1- and CUL4-associated factor 12 yes no 2 0.010446 53.756 By MS/MS By matching 1 1 1244500 548220 696320 2666 1629 2859 6029;6030 5020 5020 2269;4368 1 RSPQQTVPYVVPLSPK VTERQSTKRSPQQTVP YVVPLSPKLPKTKEYA K R S P K L 0 1 0 0 0 2 0 0 0 0 1 1 0 0 4 2 1 0 1 3 0 0 16 1 1794.9992 H0Y6S1;Q9UQR0 H0Y6S1 14 29 SCML2 Sex comb on midleg-like protein 2 yes no 3 0.014046 46.892 By matching By MS/MS 1 1 1669400 546430 1122900 2667 839 2860 6031;6032 5021 5021 1131;1132 1 RSPSPYYSR YYSRSYRRRSPSPYYS SPSPYYSRGGYRSRSR R R S S R G 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 2 0 0 0 9 1 1111.5411 H7BXF3;Q13595;P62995;H7C2L4 H7BXF3 102 110 TRA2B;TRA2A Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta yes no 2 0.0094995 52.937 By MS/MS By MS/MS 1 2 5409900 1763500 3646300 2668 939 2861 6033;6034;6035 5022;5023;5024 5022 1264;1265;4202 3 RSPSVSSPEPAEKSR SRTPPRHRRSPSVSSP PEPAEKSRSSRRRRSA R R S S R S 1 2 0 0 0 0 2 0 0 0 0 1 0 0 3 5 0 0 0 1 0 0 15 2 1612.8169 Q9UQ35 Q9UQ35 1726 1740 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0040711 54.784 By matching By MS/MS 1 1 3533000 1542200 1990800 2669 2134 2862 6036;6037 5025 5025 3081;3082;3083;3084 1 RSPVPAQIAITVPK DSQNLNSRRSPVPAQI QIAITVPKTWKKPKDR R R S P K T 2 1 0 0 0 1 0 0 0 2 0 1 0 0 3 1 1 0 0 2 0 0 14 1 1475.8824 A0A0A0MSA7;A0A0U1RQK7;O43432 A0A0A0MSA7 493 506 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 2 0.0068851 68.786 By MS/MS By matching 1 1 3079900 1296200 1783700 2670 158 2863 6038;6039 5026 5026 215 1 RSRLCNNPTPQFGGK TCGGGVQKRSRLCNNP PTPQFGGKDCIGDVTE K R S G K D 0 2 2 0 1 1 0 2 0 0 1 1 0 1 2 1 1 0 0 0 0 0 15 2 1730.8635 CON__Q28194;P07996 CON__Q28194 515 529 THBS1 Thrombospondin-1 yes no 3 0.019536 40.477 By MS/MS By matching 1 1 2199800 1357800 842060 + 2671 508 2864 6040;6041 5027 5027 72 3384 0 RSSFSMEEGDVL EASKASSRRSSFSMEE SMEEGDVL________ R R S V L - 0 1 0 1 0 0 2 1 0 0 1 0 1 1 0 3 0 0 0 1 0 0 12 1 1355.6027 B1AKB5;B0QYS6;B0QYS7;P19484 B1AKB5 323 334 TFEB Transcription factor EB yes no 2 0.013347 65.895 By matching By MS/MS 1 1 897070 448620 448440 2672 351 2865 6042;6043 5028 5028 522 1 RSSLLNAK GAHKKRARRSSLLNAK RSSLLNAKKLYEDAQM R R S A K K 1 1 1 0 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 8 1 887.51886 B7Z7Y1;E9PCH4;Q8TEU7;D6RE77 B7Z7Y1 1092 1099 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 2 0.011552 101.39 By MS/MS 1 2480200 0 2480200 2673 409 2866 6044 5029 5029 571 1 RSSPPPPPSGSSSR GSSSGPARRSSPPPPP PPSGSSSRTPARRPRS R R S S R T 0 2 0 0 0 0 0 1 0 0 0 0 0 0 5 6 0 0 0 0 0 0 14 1 1394.6902 Q5VUA4 Q5VUA4 38 51 ZNF318 Zinc finger protein 318 yes yes 2 0.008889 65.956 By matching By MS/MS 1 1 4091600 2317800 1773800 2674 1649 2867 6045;6046 5030 5030 2306 1 RSSPSARPPDVPGQQPQAAK KAEYPRRRRSSPSARP GQQPQAAKSPSPVQGK R R S A K S 3 2 0 1 0 3 0 1 0 0 0 1 0 0 5 3 0 0 0 1 0 0 20 2 2073.0715 A0A0A6YYC7;Q96JP5 A0A0A6YYC7 81 100 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 yes no 3 0.0039715 67.994 By MS/MS By matching 1 1 6386200 3548600 2837700 2675 187 2868 6047;6048 5031 5031 268 1 RSSQPSPTAVPASDSPPTKQEVK PRDARPPRRSSQPSPT PPTKQEVKKAGERHKL R R S V K K 2 1 0 1 0 2 1 0 0 0 0 2 0 0 5 5 2 0 0 2 0 0 23 2 2393.2187 Q3KQU3;E9PLH3;C9JIR3 Q3KQU3 111 133 MAP7D1 MAP7 domain-containing protein 1 yes no 3 0.0085726 45.666 By MS/MS 1 1302600 1302600 0 2676 1583 2869 6049 5032 5032 2192;3777 1 RSSTAWLPRSSYS CSHSSHPRRSSTAWLP WLPRSSYS________ R R S Y S - 1 2 0 0 0 0 0 0 0 0 1 0 0 0 1 5 1 1 1 0 0 0 13 2 1496.7372 J3KRP4 J3KRP4 112 124 COG1 yes yes 2 0.014692 49.243 By MS/MS 1 32721000 32721000 0 2677 1014 2870 6050 5033 5033 1350;4211 1 RSSTSSEPTPTVK RQGMGLSRRSSTSSEP SEPTPTVKTLIKSFDS R R S V K T 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 4 3 0 0 1 0 0 13 1 1375.6943 F8WAN1;Q69YQ0 F8WAN1 830 842 SPECC1L-ADORA2A;SPECC1L Cytospin-A yes no 2 0.0014101 76.868 By matching By MS/MS 1 2 5560100 2252600 3307600 2678 761 2871 6051;6052;6053 5034;5035 5034 1016 2 RSSTVAPAQPDGAESEWTDVETR ESPNGRKRRSSTVAPA EWTDVETRCSVAVEMR R R S T R C 3 2 0 2 0 1 3 1 0 0 0 0 0 0 2 3 3 1 0 2 0 0 23 1 2488.1466 H7BYN4;Q02241 H7BYN4 902 924 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 3 0.0026391 52.79 By MS/MS By matching 1 1 6518100 3248700 3269400 2679 943 2872 6054;6055 5036 5036 1269 1 RSTQESLTAGGTDLKR APATRVTRRSTQESLT AGGTDLKRELHPPATS R R S K R E 1 2 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 16 2 1718.8911 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 303 318 LRRC41 Leucine-rich repeat-containing protein 41 yes no 3 0.0047811 78.326 By matching By MS/MS 1 1 6352100 4356800 1995300 2680 32 2873 6056;6057 5037 5037 34;35;3215 1 RSTSPIIGSPPVR LSERALPRRSTSPIIG IIGSPPVRAVPIGTPP R R S V R A 0 2 0 0 0 0 0 1 0 2 0 0 0 0 3 3 1 0 0 1 0 0 13 1 1365.7728 Q86TB9 Q86TB9 176 188 PATL1 Protein PAT1 homolog 1 yes yes 2;3 0.0051542 73.722 By MS/MS By MS/MS 3 3 19372000 8824400 10547000 2681 1722 2874;2875 6058;6059;6060;6061;6062;6063 5038;5039;5040 5038 2427;2428;2429;3835 3 RTAFYNEDDSEEEQR MRTRNQGRRTAFYNED DDSEEEQRQLLFEDTS R R T Q R Q 1 2 1 2 0 1 4 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 15 1 1887.7871 Q8WWQ0 Q8WWQ0 1774 1788 PHIP PH-interacting protein yes yes 3 0.0074432 48.616 By MS/MS 1 650030 650030 0 2682 1840 2876 6064 5041 5041 2591 1 RTDALTSSPGR SSPGRSSRRTDALTSS ALTSSPGRDLPPFEDE R R T G R D 1 2 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 11 1 1159.5945 P49736;C9J013;C9JZ21;F8WDM3 P49736 34 44 MCM2 DNA replication licensing factor MCM2 yes no 2 0.005516 83.087 By matching By MS/MS 1 1 8399300 4090000 4309300 2683 1381 2877 6065;6066 5042 5042 1846;1847;3703 1 RTFSLTEVR NPPPKLRRRTFSLTEV TFSLTEVRGQVSESED R R T V R G 0 2 0 0 0 0 1 0 0 0 1 0 0 1 0 1 2 0 0 1 0 0 9 1 1107.6037 O95239 O95239 798 806 KIF4A Chromosome-associated kinesin KIF4A yes yes 2 0.019756 79.036 By MS/MS By MS/MS 1 1 4089500 1900100 2189300 2684 1185 2878 6067;6068 5043;5044 5044 1580 2 RTIQEVLEEQSEDEDREAK TARKQLPKRTIQEVLE EDEDREAKRKKEEEEE K R T A K R 1 2 0 2 0 2 6 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 19 2 2303.0877 M0R0Q7;P18858 M0R0Q7 131 149 LIG1 DNA ligase;DNA ligase 1 yes no 3 0.0098892 56.131 By matching By MS/MS 1 1 12677000 5575300 7101800 2685 1073 2879 6069;6070 5045 5045 1415 1 RTMQSISNEQK EPGSYTGRRTMQSISN QSISNEQKACKVLGIV R R T Q K A 0 1 1 0 0 2 1 0 0 1 0 1 1 0 0 2 1 0 0 0 0 0 11 1 1320.6456 P28223 P28223 310 320 HTR2A 5-hydroxytryptamine receptor 2A yes yes 2 0.017645 44.309 By MS/MS By matching 1 1 774380 385710 388670 2686 1318 2880 6071;6072 5046 5046 173 1736;3670 1 RTPSDDEEDNLFAPPK TLKEKKERRTPSDDEE DNLFAPPKLTDEDFSP R R T P K L 1 1 1 3 0 0 2 0 0 0 1 1 0 1 3 1 1 0 0 0 0 0 16 1 1829.8432 F8W7U3;J3KP36;E7ESD2;A0A0A0MR88;A0A096LPC5;Q9Y4E1;Q641Q2 F8W7U3 242 257 FAM21A;FAM21C WASH complex subunit FAM21C;WASH complex subunit FAM21A yes no 3 0.00068902 66.702 By MS/MS By MS/MS 2 1 940910 940910 0 2687 125 2881 6073;6074;6075 5047;5048;5049 5049 170;3248 3 RTSADVEIR SPARPPRRRTSADVEI TSADVEIRGQGTGRPG R R T I R G 1 2 0 1 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 9 1 1045.5516 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2 A0A0A0MS59 2464 2472 SRCAP Helicase SRCAP yes no 2 0.020427 80.312 By matching By MS/MS 1 1 3714500 1849700 1864800 2688 156 2882 6076;6077 5050 5050 212 1 RTSFSTSDVSK ALTPTEERRTSFSTSD FSTSDVSKLLPSLAKA R R T S K L 0 1 0 1 0 0 0 0 0 0 0 1 0 1 0 4 2 0 0 1 0 0 11 1 1213.5939 M0R300;M0R0P8;Q13459 M0R300 1352 1362 MYO9B Unconventional myosin-IXb yes no 2 0.00091198 105.66 By MS/MS By MS/MS 1 1 5616100 2807900 2808200 2689 1072 2883 6078;6079 5051;5052 5052 1412 2 RTSKSSLHR SVKHPTNKRTSKSSLH TSKSSLHRPLDLDTPT K R T H R P 0 2 0 0 0 0 0 0 1 0 1 1 0 0 0 3 1 0 0 0 0 0 9 2 1070.5945 Q2LD37;H7C0G8 Q2LD37 1524 1532 KIAA1109 Uncharacterized protein KIAA1109 no no 1 NaN 0 0 0 2690 1580 0 RTSMGGTQQQFVEGVR RAHQDTQRRTSMGGTQ QQFVEGVRMEEIVEGC R R T V R M 0 2 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 16 1 1779.8686 B4DGU4;P35222 B4DGU4 543 558 CTNNB1 Catenin beta-1 yes no 2;3 1.4926E-06 96.489 By MS/MS By MS/MS 3 3 20895000 8341900 12553000 2691 374 2884;2885 6080;6081;6082;6083;6084;6085 5053;5054;5055;5056;5057 5054 51 537;3340;3341 5 RTSPQVLGSILK PKAYELEKRTSPQVLG QVLGSILKSGTTSESG K R T L K S 0 1 0 0 0 1 0 1 0 1 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1297.7718 Q7Z417 Q7Z417 570 581 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0055029 74.475 By MS/MS By MS/MS 1 1 3739900 1997800 1742100 2692 1712 2886 6086;6087 5058;5059 5059 2396;3833 2 RVGDPPQPLPEEPMEVQGAERASPEPQR DAILRYVRRVGDPPQP RASPEPQRENASPAPG R R V Q R E 2 3 0 1 0 3 5 2 0 0 1 0 1 0 7 1 0 0 0 2 0 0 28 2 3095.5094 H0Y710;A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379 H0Y710 85 112 BAG6;BAT3 Large proline-rich protein BAG6 yes no 4 0.0017618 48.867 By MS/MS 1 864820 864820 0 2693 3 2887 6088 5060 5060 0 1 1 RVHSGERPYACDLCSK PSLLASHRRVHSGERP YACDLCSKRFAQWSHL R R V S K R 1 2 0 1 2 0 1 1 1 0 1 1 0 0 1 2 0 0 1 1 0 0 16 2 1933.8887 Q96CS4 Q96CS4 421 436 ZNF689 Zinc finger protein 689 yes yes 2 0.010627 51.286 By MS/MS By matching 1 1 9540400 4366600 5173800 2694 1881 2888 6089;6090 5061 5061 1 RVNDAEPGSPEAPQGK RRRPRRRRRVNDAEPG SPEAPQGKRRKADGED R R V G K R 2 1 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 16 1 1650.7962 Q8N8A6 Q8N8A6 75 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 2;3 0.01006 58.09 By MS/MS By MS/MS 2 2 12007000 4816400 7190600 2695 1784 2889 6091;6092;6093;6094 5062;5063;5064;5065 5065 2507 4 RVNNGNTAPEDSSPAKK ARALNESKRVNNGNTA EDSSPAKKTRRCQRQE K R V K K T 2 1 3 1 0 0 1 1 0 0 0 2 0 0 2 2 1 0 0 1 0 0 17 2 1783.8813 E9PJ27;G3V167;Q9UGN5 E9PJ27 22 38 PARP2 Poly [ADP-ribose] polymerase 2 yes no 3 0.00028225 90.498 By MS/MS By MS/MS 2 1 7672700 4204700 3467900 2696 643 2890;2891 6095;6096;6097 5066;5067;5068 5068 97 871;872 3 RVNSGDTEVGSSLLR RVKAIPRRRVNSGDTE EVGSSLLRHPSPELSR R R V L R H 0 2 1 1 0 0 1 2 0 0 2 0 0 0 0 3 1 0 0 2 0 0 15 1 1588.8169 O75592 O75592 3464 3478 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 3 0.00093367 66.059 By MS/MS By MS/MS 1 1 1745000 848200 896780 2697 1167 2892 6098;6099 5069;5070 5070 1558;3630 2 RVPSPTPAPK VQPEVALKRVPSPTPA PSPTPAPKEAVREGRP K R V P K E 1 1 0 0 0 0 0 0 0 0 0 1 0 0 4 1 1 0 0 1 0 0 10 1 1048.6029 Q9UQ35 Q9UQ35 2578 2587 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0041637 61.419 By MS/MS By MS/MS 1 1 2498700 1369400 1129300 2698 2134 2893 6100;6101 5071;5072 5072 3085;3966 2 RVPSPTPAPKEAVR VQPEVALKRVPSPTPA PAPKEAVREGRPPEPT K R V V R E 2 2 0 0 0 0 1 0 0 0 0 1 0 0 4 1 1 0 0 2 0 0 14 2 1503.8522 Q9UQ35 Q9UQ35 2578 2591 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0041204 69.935 By MS/MS By MS/MS 1 1 2612700 1640200 972510 2699 2134 2894 6102;6103 5073;5074 5073 3085;3966 2 RVSEVEEEKEPVPQPLPSDDTR RLRGRGRRRVSEVEEE PLPSDDTRVENMDISD R R V T R V 0 2 0 2 0 1 5 0 0 0 1 1 0 0 4 2 1 0 0 3 0 0 22 2 2535.2453 O43290 O43290 446 467 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 3 0.0014029 71.418 By MS/MS By MS/MS 1 1 15211000 8139100 7071900 2700 1117 2895 6104;6105 5075;5076 5075 1489 2 RVSFADTIK LRNKKNSRRVSFADTI VSFADTIKVFQTESHM R R V I K V 1 1 0 1 0 0 0 0 0 1 0 1 0 1 0 1 1 0 0 1 0 0 9 1 1035.5713 E9PPJ1;Q8NG31 E9PPJ1 58 66 CASC5 Protein CASC5 yes no 2 0.0022836 127.87 By matching By MS/MS 1 1 5136400 1953900 3182500 2701 676 2896 6106;6107 5077 5077 916 1 RVSHSPPPK SPSPPPKRRVSHSPPP VSHSPPPKQRSSPVTK R R V P K Q 0 1 0 0 0 0 0 0 1 0 0 1 0 0 3 2 0 0 0 1 0 0 9 1 1003.5563 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 643 651 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.021602 52.101 By matching By MS/MS 1 2 34254000 12182000 22072000 2702 346 2897 6108;6109;6110 5078;5079 5079 508;509 2 RVSISEGDDKIEYR GESVYGEKRVSISEGD GDDKIEYRAWNPFRSK K R V Y R A 0 2 0 2 0 0 2 1 0 2 0 1 0 0 0 2 0 0 1 1 0 0 14 2 1665.8322 M0R2U2;M0R1H0;M0R2B0;M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087 M0R2U2 109 122 FBL rRNA 2-O-methyltransferase fibrillarin yes no 3 0.00046686 78.225 By matching By MS/MS 1 1 5596900 2349600 3247200 2703 1059 2898 6111;6112 5080 5080 1396 1 RVSLEPHQGPGTPESK ITTRQQRKRVSLEPHQ GPGTPESKKATSCFPR K R V S K K 0 1 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 16 1 1717.8747 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1973 1988 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0044708 51.971 By MS/MS By matching 1 1 2789000 1304700 1484200 2704 79 2899 6113;6114 5081 5081 3233 1 RVSLSEIGFGK KPLSRRLRRVSLSEIG LSEIGFGKLETYIKLD R R V G K L 0 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 1 0 0 11 1 1191.6612 E5RJM2;E5RGN0;A0A087WZU2;Q00536;H0YBX5 E5RJM2 151 161 CDK16 Cyclin-dependent kinase 16 yes no 2 1.185E-09 133.98 By MS/MS By matching 1 1 6524000 2554200 3969800 2705 92 2900 6115;6116 5082 5082 113 1 RVSLVGADDLR PQAEGPPKRVSLVGAD LVGADDLRKMQEEEAR K R V L R K 1 2 0 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 11 1 1199.6622 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1295 1305 SCRIB Protein scribble homolog yes no 2 0.008847 74.966 By MS/MS By MS/MS 1 1 23381000 11360000 12021000 2706 245 2901 6117;6118 5083;5084;5085 5085 357 3 RVSLVGADDLRK PQAEGPPKRVSLVGAD VGADDLRKMQEEEARK K R V R K M 1 2 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 12 2 1327.7572 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1295 1306 SCRIB Protein scribble homolog yes no 3 0.0020691 84.403 By MS/MS By MS/MS 1 1 1976700 983020 993720 2707 245 2902 6119;6120 5086;5087 5086 357 2 RVSRTPEPK SPSTRPIRRVSRTPEP VSRTPEPKKIKKAASP R R V P K K 0 2 0 0 0 0 1 0 0 0 0 1 0 0 2 1 1 0 0 1 0 0 9 2 1068.604 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 732 740 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0059752 74.255 By MS/MS 1 35631000 35631000 0 2708 346 2903 6121 5088 5088 510;3332 1 RVSTSWSPVGAAFNVKPQGSR LEAGIRARRVSTSWSP NVKPQGSRLDLFGERR R R V S R L 2 2 1 0 0 1 0 2 0 0 0 1 0 1 2 4 1 1 0 3 0 0 21 2 2230.1607 Q99797 Q99797 35 55 MIPEP Mitochondrial intermediate peptidase yes yes 3 0.020854 40.432 By MS/MS 1 5807200 5807200 0 2709 1946 2904 6122 5089 5089 279 2754;2755;2756;3907 1 RVSVCAETYNPDEEEEDTDPR PVPSRFNRRVSVCAET EEEDTDPRVIHPKTDE R R V P R V 1 2 1 3 1 0 5 0 0 0 0 0 0 0 2 1 2 0 1 2 0 0 21 1 2510.0503 P13861 P13861 97 117 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 3 1.4152E-17 108.13 By MS/MS By MS/MS 1 1 49365000 22799000 26566000 2710 1272 2905 6123;6124 5090;5091 5091 1674 2 RVSVCAETYNPDEEEEDTDPRVIHPK PVPSRFNRRVSVCAET DPRVIHPKTDEQRCRL R R V P K T 1 2 1 3 1 0 5 0 1 1 0 1 0 0 3 1 2 0 1 3 0 0 26 2 3084.4095 P13861 P13861 97 122 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 4 0.021126 42.254 By MS/MS By matching 1 1 3327400 1480300 1847100 2711 1272 2906 6125;6126 5092 5092 1674 1 RVTQHESDNENEIQIQNK DDSLEVERRVTQHESD NEIQIQNKLKKDFPKQ R R V N K L 0 1 3 1 0 3 3 0 1 2 0 1 0 0 0 1 1 0 0 1 0 0 18 1 2181.041 Q5VZL5 Q5VZL5 116 133 ZMYM4 Zinc finger MYM-type protein 4 yes yes 3 0.00079802 69.069 By MS/MS By MS/MS 1 1 7279400 3965400 3314000 2712 1658 2907 6127;6128 5093;5094 5094 2319 2 RVYSTSSSAGSGGGSPAVGSVCYARGR SAFSSMSRRVYSTSSS SVCYARGRCGGGGYGI R R V G R C 3 3 0 0 1 0 0 6 0 0 0 0 0 0 1 7 1 0 2 3 0 0 27 2 2632.2412 F8VS61;CON__Q7Z794;Q7Z794 F8VS61 17 43 KRT77 Keratin, type II cytoskeletal 1b yes no 3 0.010044 48.389 By MS/MS By matching 1 1 1568700 1132000 436700 + 2713 511 2908 6129;6130 5095 5095 696;697;698;699;3386;4131 0 RWDQTADQTPGATPK QPPSKRKRRWDQTADQ QTPGATPKKLSSWDQA R R W P K K 2 1 0 2 0 2 0 1 0 0 0 1 0 0 2 0 3 1 0 0 0 0 15 1 1670.8012 O75533 O75533 199 213 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.0010481 64.346 By MS/MS By MS/MS 2 2 6226200 3066300 3159900 2714 1166 2909 6131;6132;6133;6134 5096;5097;5098 5097 3628;3629 3 RYEDDGISDDEIEGK ________________ SDDEIEGKRTFDLEEK R R Y G K R 0 1 0 4 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 0 0 0 15 1 1739.7486 I3VM54;Q9Y2K7 I3VM54 4 18 KDM2A Lysine-specific demethylase 2A yes no 2;3 0.0029395 71.286 By MS/MS By MS/MS 2 2 5922400 2341100 3581300 2715 993 2910 6135;6136;6137;6138 5099;5100;5101 5099 1329;4210 3 RYEDDGISDDEIEGKR ________________ DDEIEGKRTFDLEEKL R R Y K R T 0 2 0 4 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 0 0 0 16 2 1895.8497 I3VM54;Q9Y2K7 I3VM54 4 19 KDM2A Lysine-specific demethylase 2A yes no 3 0.0011217 85.397 By matching By MS/MS 1 1 10717000 4936300 5780500 2716 993 2911 6139;6140 5102 5102 1329;4210 1 RYPSSISSSPQK EQRSTQTRRYPSSISS SISSSPQKDLTQAKNG R R Y Q K D 0 1 0 0 0 1 0 0 0 1 0 1 0 0 2 5 0 0 1 0 0 0 12 1 1335.6783 F8W726;Q14157 F8W726 612 623 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 6.8281E-11 131.79 By MS/MS By MS/MS 2 2 70422000 32835000 37587000 2717 754 2912;2913 6141;6142;6143;6144 5103;5104;5105;5106 5104 1002;1003;1004;1005 4 RYPSSISSSPQKDLTQAK EQRSTQTRRYPSSISS QKDLTQAKNGFSSVQA R R Y A K N 1 1 0 1 0 2 0 0 0 1 1 2 0 0 2 5 1 0 1 0 0 0 18 2 1992.0276 F8W726;Q14157 F8W726 612 629 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.0058824 62.438 By MS/MS 1 8498500 0 8498500 2718 754 2914 6145 5107 5107 1002;1003;1004;1005 1 RYSPPIQR RRRSPSPRRYSPPIQR RYSPPIQRRYSPSPPP R R Y Q R R 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 8 1 1015.5563 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 604 611 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 1.4028E-43 167.93 By MS/MS By MS/MS 2 2 93195000 51930000 41265000 2719 346 2915 6146;6147;6148;6149 5108;5109;5110;5111 5108 511 4 RYSPSPPPK RYSPPIQRRYSPSPPP YSPSPPPKRRTASPPP R R Y P K R 0 1 0 0 0 0 0 0 0 0 0 1 0 0 4 2 0 0 1 0 0 0 9 1 1027.5451 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 612 620 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.00065468 94.023 By MS/MS By MS/MS 1 1 32244000 16994000 15251000 2720 346 2916 6150;6151 5112;5113;5114;5115;5116;5117 5113 512;513 6 RYWEEETVPTTAGASPGPPR QTKRKKPRRYWEEETV GASPGPPRNKKNRELR R R Y P R N 2 2 0 0 0 0 3 2 0 0 0 0 0 0 4 1 3 1 1 1 0 0 20 1 2200.0549 O15213 O15213 27 46 WDR46 WD repeat-containing protein 46 yes yes 3 0.0023659 55.526 By MS/MS By matching 1 1 2588800 1026900 1561900 2721 1107 2917 6152;6153 5118 5118 1477 1 SADFVVEAIGDDVGTLGFSVEGPSQAK LEGGVVGKSADFVVEA VEGPSQAKIECDDKGD K S A A K I 3 0 0 3 0 1 2 4 0 1 1 1 0 2 1 3 1 0 0 4 0 0 27 0 2694.3025 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 594 620 FLNA Filamin-A yes no 3 0.0090988 45.862 By MS/MS 1 2695400 0 2695400 2722 1302 2918 6154 5119 5119 1 SAEEAPLYSKVTPR TGTGTGARSAEEAPLY LYSKVTPRAQRPGAHA R S A P R A 2 1 0 0 0 0 2 0 0 0 1 1 0 0 2 2 1 0 1 1 0 0 14 1 1546.7991 E7EMB8;Q99952 E7EMB8 187 200 PTPN18 Tyrosine-protein phosphatase non-receptor type 18 yes no 3 0.0082237 56.139 By matching By MS/MS 1 1 1123600 663080 460530 2723 558 2919 6155;6156 5120 5120 4139 1 SAEEEAADLPTKPTK SSRSAEKRSAEEEAAD DLPTKPTKISKFGFAI R S A T K I 3 0 0 1 0 0 3 0 0 0 1 2 0 0 2 1 2 0 0 0 0 0 15 1 1585.7835 Q8WW12 Q8WW12 53 67 PCNP PEST proteolytic signal-containing nuclear protein yes yes 2 0.0023987 73.022 By MS/MS By matching 1 1 1332200 842330 489890 2724 1838 2920 6157;6158 5121 5121 2585 1 SAGEEEDGPVLTDEQK PSLDQWHRSAGEEEDG PVLTDEQKSRIQAMKP R S A Q K S 1 0 0 2 0 1 4 2 0 0 1 1 0 0 1 1 1 0 0 1 0 0 16 0 1702.7534 F5GYV5;H7BZV4;A0A0C4DG62;F8WCT1;F5H7X4;Q66PJ3 F5GYV5 140 155 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 2 0.0026007 66.965 By matching By MS/MS 1 1 47868000 22023000 25845000 2725 205 2921 6159;6160 5122 5122 296 1 SAGGRPGSGPQLGTGR GWDMISQRSAGGRPGS GPQLGTGRGTLRLRSR R S A G R G 1 2 0 0 0 1 0 6 0 0 1 0 0 0 2 2 1 0 0 0 0 0 16 1 1453.7386 K7EM11;K7ESN1;O14908 K7EM11 20 35 GIPC1 PDZ domain-containing protein GIPC1 yes no 2 0.0090027 61.821 By MS/MS By matching 1 1 4686200 2153600 2532700 2726 1045 2922 6161;6162 5123 5123 1380 1 SAGGSSPEGGEDSDREDGNYCPPVKR QKDKGQKRSAGGSSPE NYCPPVKRERTSSLTQ R S A K R E 1 2 1 3 1 0 3 5 0 0 0 1 0 0 3 4 0 0 1 1 0 0 26 2 2722.1525 B7Z7F3;Q9H6Z4;K7EID7;K7ENB9 B7Z7F3 28 53 RANBP3 Ran-binding protein 3 yes no 4 0.012143 46.808 By MS/MS By matching 1 1 6611900 3507600 3104200 2727 408 2923 6163;6164 5124 5124 567 1 SALLTQNGTGSLPR LGRSPSPKSALLTQNG NGTGSLPRNLAATLQD K S A P R N 1 1 1 0 0 1 0 2 0 0 3 0 0 0 1 2 2 0 0 0 0 0 14 0 1413.7576 Q86UU1;A0A087WZL0 Q86UU1 1007 1020 PHLDB1 Pleckstrin homology-like domain family B member 1 yes no 2 0.0091986 58.461 By MS/MS By MS/MS 2 2 5815800 2544600 3271100 2728 1727 2924;2925 6165;6166;6167;6168 5125;5126;5127 5126 239 2435;3839 3 SALSSSLR ASGEGLKRSALSSSLR SALSSSLRDLSEAGVH R S A L R D 1 1 0 0 0 0 0 0 0 0 2 0 0 0 0 4 0 0 0 0 0 0 8 0 819.44503 A0A0C4DGT3;A0A087WWK8;Q6DN90 A0A0C4DGT3 798 805 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2 0.0079569 90.15 By MS/MS By MS/MS 1 1 2016800 940640 1076200 2729 65 2926 6169;6170 5128;5129 5129 85;86 2 SAMDSPVPASMFAPEPSSPGAAR ________________ PSSPGAARAAAAAARL R S A A R A 5 1 0 1 0 0 1 1 0 0 0 0 2 1 5 5 0 0 0 1 0 0 23 0 2259.03 F8WAZ4;O00178 F8WAZ4 8 30 GTPBP1 GTP-binding protein 1 yes no 2 0.0055566 44.382 By MS/MS By matching 1 1 2204400 1393500 810980 2730 763 2927 6171;6172 5130 5130 90;91 1018 1 SAMPEGYVQER MKRHDFFKSAMPEGYV PEGYVQERTIFFKDDG K S A E R T 1 1 0 0 0 1 2 1 0 0 0 0 1 0 1 1 0 0 1 1 0 0 11 0 1265.571 CON__Q9U6Y5 CON__Q9U6Y5 86 96 yes yes 2 0.019485 46.462 By MS/MS 1 0 0 0 + 2731 513 2928 6173 5131 5131 4132 1 SANPTRPSSPVTSHISK SPLRSPIRSANPTRPS PVTSHISKVLFGEDDS R S A S K V 1 1 1 0 0 0 0 0 1 1 0 1 0 0 3 5 2 0 0 1 0 0 17 1 1764.9119 H0Y8E8;F8W6N3;Q92560 H0Y8E8 14 30 BAP1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase BAP1 yes no 3 0.0062203 52.862 By matching By MS/MS 1 1 7704200 3800300 3903900 2732 753 2929 6174;6175 5132 5132 997;998 1 SAPASPTHPGLMSPR PFGPLSSRSAPASPTH HPGLMSPRSGGLQTPE R S A P R S 2 1 0 0 0 0 0 1 1 0 1 0 1 0 4 3 1 0 0 0 0 0 15 0 1504.7456 P85037 P85037 416 430 FOXK1 Forkhead box protein K1 yes yes 3 0.011943 45.207 By matching By MS/MS 1 1 2658600 1213700 1444900 2733 1445 2930 6176;6177 5133 5133 1925;1926 1 SAQGSSSPVPSMVQK VLPSPSGRSAQGSSSP PVPSMVQKSPRITPPA R S A Q K S 1 0 0 0 0 2 0 1 0 0 0 1 1 0 2 5 0 0 0 2 0 0 15 0 1488.7242 A0A0A0MSW3;P35658 A0A0A0MSW3 80 94 NUP214 Nuclear pore complex protein Nup214 yes no 2 1.646E-05 96.604 By MS/MS By MS/MS 1 1 8224500 4297400 3927200 2734 168 2931 6178;6179 5134;5135 5135 236 2 SASADNLTLPR LRRSARKRSASADNLT ADNLTLPRWSPAIIS_ R S A P R W 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 2 1 0 0 0 0 0 11 0 1143.5884 Q8ND76 Q8ND76 324 334 CCNY Cyclin-Y yes yes 2 2.8007E-06 126.34 By MS/MS By MS/MS 1 1 9207300 3807900 5399400 2735 1796 2932 6180;6181 5136;5137 5136 2524;2525 2 SASASHQADIK RPPKSARRSASASHQA ASHQADIKEARREVEV R S A I K E 3 0 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1113.5415 C9JXK0;Q14739 C9JXK0 97 107 LBR Lamin-B receptor yes no 2 1.1796E-05 122.78 By MS/MS By MS/MS 1 1 40268000 21623000 18645000 2736 488 2933 6182;6183 5138;5139;5140;5141 5139 674;675 4 SASLGSQQLLGLPR DTHFLHLRSASLGSQQ QQLLGLPRDPGSSVSG R S A P R D 1 1 0 0 0 2 0 2 0 0 4 0 0 0 1 3 0 0 0 0 0 0 14 0 1425.794 Q8IZJ1 Q8IZJ1 526 539 UNC5B Netrin receptor UNC5B yes yes 2 0.021983 50.659 By matching By MS/MS 1 1 503550 211580 291970 2737 1769 2934 6184;6185 5142 5142 2487 1 SASLSNLHSLDR PKKTPPRKSASLSNLH SNLHSLDRSTREVELG K S A D R S 1 1 1 1 0 0 0 0 1 0 3 0 0 0 0 4 0 0 0 0 0 0 12 0 1298.6579 B0QY53;B0QY54;A0A087WUW0;Q9Y3M2 B0QY53 18 29 CBY1 Protein chibby homolog 1 yes no 2 0.00093552 96.707 By MS/MS By MS/MS 1 1 9241400 4650300 4591100 2738 46 2935 6186;6187 5143;5144 5143 61 2 SASNVPSGKSTDEEEEAQTPQAPR STLGEETKSASNVPSG AQTPQAPRTLGPSPPA K S A P R T 3 1 1 1 0 2 4 1 0 0 0 1 0 0 3 4 2 0 0 1 0 0 24 1 2514.147 Q9P2K3 Q9P2K3 366 389 RCOR3 REST corepressor 3 yes yes 3 0.006072 49.125 By matching By MS/MS 1 1 1565600 855510 710120 2739 2090 2936 6188;6189 5145 5145 2996;2997;3951 1 SASPDDDLGSSNWEAADLGNEER SHPHGVKRSASPDDDL ADLGNEERKQKFLRLM R S A E R K 3 1 2 4 0 0 3 2 0 0 2 0 0 0 1 4 0 1 0 0 0 0 23 0 2434.0157 E9PM92;O00193;E9PQA1 E9PM92 15 37 C11orf58;SMAP Small acidic protein yes no 2;3 0.00038633 82.189 By MS/MS By MS/MS 1 2 253640000 92507000 161130000 2740 666 2937 6190;6191;6192 5146;5147;5148 5148 899 3 SASPDDDLGSSNWEAADLGNEERK SHPHGVKRSASPDDDL DLGNEERKQKFLRLMG R S A R K Q 3 1 2 4 0 0 3 2 0 0 2 1 0 0 1 4 0 1 0 0 0 0 24 1 2562.1106 E9PM92;O00193;E9PQA1 E9PM92 15 38 C11orf58;SMAP Small acidic protein yes no 3 0.00037095 61.139 By MS/MS By matching 1 1 55080000 28441000 26639000 2741 666 2938 6193;6194 5149 5149 899 1 SASPDDDLGSSNWEAADLGNEERKQK SHPHGVKRSASPDDDL GNEERKQKFLRLMGAG R S A Q K F 3 1 2 4 0 1 3 2 0 0 2 2 0 0 1 4 0 1 0 0 0 0 26 2 2818.2642 E9PM92;O00193;E9PQA1 E9PM92 15 40 C11orf58;SMAP Small acidic protein yes no 4 3.8861E-06 85.969 By MS/MS By MS/MS 1 1 5241200 2749100 2492100 2742 666 2939 6195;6196 5150;5151 5151 899 2 SASQSSLDKLDQELK DTEGSKQRSASQSSLD DKLDQELKEQQKELKN R S A L K E 1 0 0 2 0 2 1 0 0 0 3 2 0 0 0 4 0 0 0 0 0 0 15 1 1647.8315 A0A087X2D8;O60271 A0A087X2D8 719 733 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2 0.0079616 64.945 By MS/MS By MS/MS 2 2 14675000 5759700 8915200 2743 115 2940 6197;6198;6199;6200 5152;5153 5153 151;152;153 2 SASQSSLDKLDQELKEQQK DTEGSKQRSASQSSLD QELKEQQKELKNQEEL R S A Q K E 1 0 0 2 0 4 2 0 0 0 3 3 0 0 0 4 0 0 0 0 0 0 19 2 2161.0863 A0A087X2D8;O60271 A0A087X2D8 719 737 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 3 0.0052337 67.153 By matching By MS/MS 2 2 30005000 14522000 15483000 2744 115 2941;2942 6201;6202;6203;6204 5154;5155 5154 151;152;153 2 SASSGAEGDVSSEREP NTPRKEDRSASSGAEG DVSSEREP________ R S A E P - 2 1 0 1 0 0 3 2 0 0 0 0 0 0 1 5 0 0 0 1 0 0 16 1 1563.6649 Q8TEA8 Q8TEA8 194 209 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 2 8.8731E-18 116.58 By MS/MS By MS/MS 2 2 36003000 16306000 19698000 2745 1824 2943 6205;6206;6207;6208 5156;5157;5158;5159 5156 2568;2569;2570;2571 4 SASSGLGEFNAR CERPGRGRSASSGLGE GLGEFNARAREVELEH R S A A R A 2 1 1 0 0 0 1 2 0 0 1 0 0 1 0 3 0 0 0 0 0 0 12 0 1194.5629 Q86YS3 Q86YS3 525 536 RAB11FIP4 Rab11 family-interacting protein 4 yes yes 2 0.0043052 71.241 By MS/MS By MS/MS 1 1 1742300 750070 992220 2746 1745 2944 6209;6210 5160;5161 5160 2455 2 SASSSWLEGTSTQAK APGAGLQRSASSSWLE EGTSTQAKELRLARIT R S A A K E 2 0 0 0 0 1 1 1 0 0 1 1 0 0 0 5 2 1 0 0 0 0 15 0 1538.7213 K7EL81;Q9BZL4 K7EL81 406 420 PPP1R12C Protein phosphatase 1 regulatory subunit 12C yes no 2 0.0058075 59.75 By matching By MS/MS 1 1 3909900 1609900 2300000 2747 1042 2945 6211;6212 5162 5162 1379 1 SASSVEGPGGALYAR PASSDSERSASSVEGP PGGALYARVARREARP R S A A R V 3 1 0 0 0 0 1 3 0 0 1 0 0 0 1 3 0 0 1 1 0 0 15 0 1420.6947 A0A096LNX8;Q96GP6 A0A096LNX8 616 630 SCARF2 Scavenger receptor class F member 2 yes no 2 1.8615E-10 110.39 By MS/MS By MS/MS 1 1 3346500 1617800 1728700 2748 122 2946 6213;6214 5163;5164 5164 4021 2 SASTDLGTADVVLGR RGKRQALKSASTDLGT TADVVLGRVLEVTDLP K S A G R V 2 1 0 2 0 0 0 2 0 0 2 0 0 0 0 2 2 0 0 2 0 0 15 0 1460.7471 H7C0E9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5 H7C0E9 618 632 R3HDM2 R3H domain-containing protein 2 yes no 2 6.5371E-107 180.85 By MS/MS By MS/MS 1 1 13739000 5984900 7753900 2749 274 2947 6215;6216 5165;5166 5166 390 2 SASTEKLEQGTSALIR ESKTANKRSASTEKLE QGTSALIRQMPLSSAG R S A I R Q 2 1 0 0 0 1 2 1 0 1 2 1 0 0 0 3 2 0 0 0 0 0 16 1 1689.8897 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 183 198 MAP7D3 MAP7 domain-containing protein 3 yes no 2;3 1.8266E-58 159.14 By MS/MS By MS/MS 2 2 31063000 17130000 13933000 2750 149 2948 6217;6218;6219;6220 5167;5168;5169 5167 205;3263 3 SASVSSISLTK HSSPFHSRSASVSSIS VSSISLTKGTDEVPVP R S A T K G 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 5 1 0 0 1 0 0 11 0 1078.587 G5E9C8;Q07889 G5E9C8 1117 1127 SOS1 Son of sevenless homolog 1 yes no 2 0.001842 94.191 By matching By MS/MS 1 1 8077500 3951100 4126400 2751 810 2949 6221;6222 5170 5170 1082 1 SASWGSADQLK AEKRSHQRSASWGSAD WGSADQLKEQIAKLRQ R S A L K E 2 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 0 1 0 0 0 0 11 0 1148.5462 H7C0Q2;Q86VQ1 H7C0Q2 109 119 GLCCI1 Glucocorticoid-induced transcript 1 protein yes no 2 0.0017978 90.697 By MS/MS By MS/MS 1 1 9187000 4290800 4896300 2752 950 2950 6223;6224 5171;5172 5172 1275 2 SASWGSTDQLK KKKGSHKRSASWGSTD WGSTDQLKEIAKLRQQ R S A L K E 1 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 1 1 0 0 0 0 11 0 1178.5568 Q6P1L5 Q6P1L5 271 281 FAM117B Protein FAM117B yes yes 2 0.0092458 63.091 By MS/MS By MS/MS 1 1 12364000 5474400 6889900 2753 1676 2951 6225;6226 5173;5174 5174 2345 2 SATDGNTSTTPPTSAK AAAAQEVRSATDGNTS TTPPTSAKKRKLNSSS R S A A K K 2 0 1 1 0 0 0 1 0 0 0 1 0 0 2 3 5 0 0 0 0 0 16 0 1534.7111 K4DI93;Q13620 K4DI93 27 42 CUL4B Cullin-4B yes no 2 1.7194E-20 123.26 By MS/MS By MS/MS 2 2 9256400 4489400 4767000 2754 1033 2952 6227;6228;6229;6230 5175;5176;5177;5178 5177 1372;3571;3572 4 SATLPYIKQEEFSPR PRQQESAKSATLPYIK KQEEFSPRSQNSQPEG K S A P R S 1 1 0 0 0 1 2 0 0 1 1 1 0 1 2 2 1 0 1 0 0 0 15 1 1764.9046 A0A088AWL3;O75376 A0A088AWL3 1006 1020 NCOR1 Nuclear receptor corepressor 1 yes no 3 0.0014468 65.805 By MS/MS 1 0 0 0 2755 119 2953 6231 5179 5179 160 1 SAVRPASLNLNR VHYATMARSAVRPASL PASLNLNRSRSLSNSN R S A N R S 2 2 2 0 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 12 1 1296.7262 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 882 893 DOCK7 Dedicator of cytokinesis protein 7 yes no 2;3 0.002388 71.531 By MS/MS By MS/MS 1 2 19692000 9039100 10653000 2756 1911 2954 6232;6233;6234 5180;5181 5181 2704 2 SAYQEYDSDSDVPEELKR YESDEQEKSAYQEYDS DVPEELKRDYVDEQTG K S A K R D 1 1 0 3 0 1 3 0 0 0 1 1 0 0 1 3 0 0 2 1 0 0 18 1 2129.9389 H0Y7Q2;Q96JG6 H0Y7Q2 339 356 CCDC132 Coiled-coil domain-containing protein 132 yes no 3 0.012508 42.618 By matching By MS/MS 1 1 2584400 974800 1609600 2757 845 2955 6235;6236 5182 5182 1139 1 SCDPVFYR ASRQNTLRSCDPVFYR SCDPVFYRQVLGAESA R S C Y R Q 0 1 0 1 1 0 0 0 0 0 0 0 0 1 1 1 0 0 1 1 0 0 8 0 1042.4542 Q9UN70;A0A087WYB5 Q9UN70 791 798 PCDHGC3 Protocadherin gamma-C3 yes no 2 0.018484 54.205 By matching By MS/MS 1 1 461240 216730 244520 2758 2128 2956 6237;6238 5183 5183 4464 1 SCFESSPDPELK QSVTPQRRSCFESSPD SSPDPELKSRTPSRHS R S C L K S 0 0 0 1 1 0 2 0 0 0 1 1 0 1 2 3 0 0 0 0 0 0 12 0 1394.6024 Q9UQ35;I3L182;I3L4D8 Q9UQ35 871 882 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 1.8817E-29 152.38 By MS/MS By MS/MS 2 1 66508000 33614000 32893000 2759 2134 2957;2958 6239;6240;6241 5184;5185;5186;5187;5188 5186 3086;3087 5 SCFESSPDPELKSR QSVTPQRRSCFESSPD PDPELKSRTPSRHSCS R S C S R T 0 1 0 1 1 0 2 0 0 0 1 1 0 1 2 4 0 0 0 0 0 0 14 1 1637.7355 Q9UQ35;I3L182;I3L4D8 Q9UQ35 871 884 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0061146 70.889 By matching By MS/MS 1 1 3205000 1475200 1729900 2760 2134 2959 6242;6243 5189 5189 3086;3087 1 SCQRKGVPIQTPR QLKAEAGRSCQRKGVP GVPIQTPREHSWISCK R S C P R E 0 2 0 0 1 2 0 1 0 1 0 1 0 0 2 1 1 0 0 1 0 0 13 2 1525.8147 Q9XRX5 Q9XRX5 87 99 HHLA3 HERV-H LTR-associating protein 3 yes yes 3 0.021942 42.58 By MS/MS 1 880970 0 880970 2761 2138 2960 6244 5190 5190 3101;3972 0 SCTPSPDQISHR SASASAERSCTPSPDQ SPDQISHRASLEDAPV R S C H R A 0 1 0 1 1 1 0 0 1 1 0 0 0 0 2 3 1 0 0 0 0 0 12 0 1383.6201 C9J6P4;Q7Z2W4 C9J6P4 271 282 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0077588 63.32 By matching By MS/MS 1 1 4238400 2129000 2109400 2762 446 2961 6245;6246 5191 5191 640 1 SDGALLLGASSLSGR QLEAARYRSDGALLLG GASSLSGRCWAGSLWL R S D G R C 2 1 0 1 0 0 0 3 0 0 4 0 0 0 0 4 0 0 0 0 0 0 15 0 1402.7416 Q9BQA1 Q9BQA1 38 52 WDR77 Methylosome protein 50 yes yes 2 0.0014048 72.652 By MS/MS 1 423860 423860 0 2763 1951 2962 6247 5192 5192 1 SDKSPDLAPTPAPQSTPR KAAKQEARSDKSPDLA PAPQSTPRNTVSQSIS R S D P R N 2 1 0 2 0 1 0 0 0 0 1 1 0 0 5 3 2 0 0 0 0 0 18 1 1863.9327 F8WAE5;Q9BY44 F8WAE5 498 515 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 2;3 3.9039E-05 94.45 By MS/MS By MS/MS 2 2 96467000 50285000 46182000 2764 760 2963 6248;6249;6250;6251 5193;5194 5194 1013 2 SDLNGLPSPVEER PYATIIPRSDLNGLPS LPSPVEERCGDSPNSE R S D E R C 0 1 1 1 0 0 2 1 0 0 2 0 0 0 2 2 0 0 0 1 0 0 13 0 1411.6943 C9JLA7;E7EWN3;Q9C0A6 C9JLA7 65 77 SETD5 SET domain-containing protein 5 yes no 2 0.016276 67.234 By MS/MS By MS/MS 2 2 2284200 1131800 1152300 2765 469 2964;2965 6252;6253;6254;6255 5195;5196 5195 68 656 2 SDLSPAEIRSSWSEAAPK LEEGQLPRSDLSPAEI SWSEAAPKPFSRWRNL R S D P K P 3 1 0 1 0 0 2 0 0 1 1 1 0 0 2 5 0 1 0 0 0 0 18 1 1929.9432 B7Z3L6;O00337 B7Z3L6 40 57 SLC28A1 Sodium/nucleoside cotransporter 1 yes no 2 0.019939 44.299 By MS/MS 1 0 0 0 2766 407 2966 6256 5197 5197 563;564;565;566 1 SDSASSEPVGIYQGFEK VTQRASRRSDSASSEP GIYQGFEKKTGVAGED R S D E K K 1 0 0 1 0 1 2 2 0 1 0 1 0 1 1 4 0 0 1 1 0 0 17 0 1799.8214 Q05655 Q05655 302 318 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2 0.00076449 83.226 By MS/MS By MS/MS 2 3 8907300 3010100 5897200 2767 1465 2967;2968 6257;6258;6259;6260;6261 5198;5199;5200 5199 1974;1975;4329 3 SDSENEQPASNQGQSTLQPLPPSHK TDTEHENKSDSENEQP QPLPPSHKQHSAQHHP K S D H K Q 1 0 2 1 0 4 2 1 1 0 2 1 0 0 4 5 1 0 0 0 0 0 25 0 2675.2423 Q9P273 Q9P273 166 190 TENM3 Teneurin-3 yes yes 3 0.002418 52.509 By MS/MS By matching 1 1 2840900 1324400 1516400 2768 2088 2969 6262;6263 5201 5201 312;313;453;454;455;456 1 SDSGGSSSEPFDR SGLVPRERSDSGGSSS SSSEPFDRHAPAMLRE R S D D R H 0 1 0 2 0 0 1 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 13 0 1326.5324 P48634 P48634 759 771 PRRC2A Protein PRRC2A yes yes 2 1.0555E-05 106.29 By MS/MS By MS/MS 1 1 6083400 3004500 3078800 2769 1373 2970 6264;6265 5202;5203;5204;5205 5205 1823;1824 4 SDSRAQAVSEDAGGNEGR GEQARDERSDSRAQAV DAGGNEGRAAEAEPRA R S D G R A 3 2 1 2 0 1 2 3 0 0 0 0 0 0 0 3 0 0 0 1 0 0 18 1 1804.7936 C9JZG1;P55884 C9JZG1 78 95 EIF3B Eukaryotic translation initiation factor 3 subunit B yes no 3 0.0013596 77.899 By MS/MS By MS/MS 1 1 5273800 2653400 2620400 2770 494 2971 6266;6267 5206;5207 5206 681 2 SDVLELTDDNFESR ________________ TDDNFESRISDTGSAG - S D S R I 0 1 1 3 0 0 2 0 0 0 2 0 0 1 0 2 1 0 0 1 0 0 14 0 1638.7373 H7BZJ3 H7BZJ3 1 14 PDIA3 yes yes 2 9.8478E-38 152.67 By MS/MS By MS/MS 1 1 7543800 2084800 5458900 2771 947 2972 6268;6269 5208;5209 5209 2 SEACPCQPDSGSPLPAEEEKR KRSIEGRRSEACPCQP LPAEEEKRLSAESGLS R S E K R L 2 1 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 21 1 2343.0107 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 412 432 SCRIB Protein scribble homolog yes no 3 0.0032093 52.298 By matching By MS/MS 1 1 2191000 916670 1274300 2772 245 2973 6270;6271 5210 5210 355;356 1 SEAPAEVTHFSPK KVAQRIKKSEAPAEVT EVTHFSPKSIPDYDFE K S E P K S 2 0 0 0 0 0 2 0 1 0 0 1 0 1 2 2 1 0 0 1 0 0 13 0 1398.6779 Q6PID6 Q6PID6 187 199 TTC33 Tetratricopeptide repeat protein 33 yes yes 2;3 4.792E-05 105.4 By MS/MS By MS/MS 2 2 9217100 4101600 5115500 2773 1684 2974 6272;6273;6274;6275 5211;5212;5213 5211 2354;3818 3 SEDDSAKFDSNEEDSASVFSPSFGLK SFPSYSQKSEDDSAKF FSPSFGLKQTDKVPSK K S E L K Q 2 0 1 4 0 0 3 1 0 0 1 2 0 3 1 7 0 0 0 1 0 0 26 1 2794.2093 Q02880 Q02880 1457 1482 TOP2B DNA topoisomerase 2-beta yes yes 3 3.7799E-06 84.327 By MS/MS 1 7004100 0 7004100 2774 1456 2975 6276 5214 5214 1943 1 SEDEDSLEEAGSPAPGPCPR PGSAGQPRSEDEDSLE PAPGPCPRSNAMLAVK R S E P R S 2 1 0 2 1 0 4 2 0 0 1 0 0 0 4 3 0 0 0 0 0 0 20 0 2098.8749 Q8TBB5 Q8TBB5 413 432 KLHDC4 Kelch domain-containing protein 4 yes yes 2 0.012373 50.562 By MS/MS By matching 1 1 2148400 1105900 1042500 2775 1816 2976 6277;6278 5215 5215 2559;2560 1 SEDESETEDEEEKSQEDQEQKR KEKKRKKRSEDESETE QEDQEQKRKRRKTRQP R S E K R K 0 1 0 3 0 3 9 0 0 0 0 2 0 0 0 3 1 0 0 0 0 0 22 2 2683.0853 Q7Z6P5;J3KQ69;P25205 Q7Z6P5 163 184 MCM3 DNA replication licensing factor MCM3 yes no 3 1.6558E-26 119.76 By MS/MS By MS/MS 1 1 215130000 126800000 88327000 2776 1007 2977 6279;6280 5216;5217 5216 1342 2 SEDMPFSPK EQNPPPARSEDMPFSP EDMPFSPKASVAAMEA R S E P K A 0 0 0 1 0 0 1 0 0 0 0 1 1 1 2 2 0 0 0 0 0 0 9 0 1036.4535 Q12888;A6NNK5;C9JXV0 Q12888 259 267 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 5.049E-49 167.11 By MS/MS By MS/MS 2 2 9595500 4583700 5011700 2777 1481 2978;2979 6281;6282;6283;6284 5218;5219;5220;5221;5222;5223 5221 205 2013 6 SEISPEGEKYKPLITGEK LLENTTIRSEISPEGE KPLITGEKKVQCISHE R S E E K K 0 0 0 0 0 0 4 2 0 2 1 3 0 0 2 2 1 0 1 0 0 0 18 2 2004.0415 Q96PY6 Q96PY6 834 851 NEK1 Serine/threonine-protein kinase Nek1 yes yes 3 0.0075182 59.15 By matching By MS/MS 1 1 2382100 1363200 1018900 2778 1921 2980 6285;6286 5224 5224 2716 1 SEIYGLVQR KSSSEESRSEIYGLVQ EIYGLVQRCVIIQKDD R S E Q R C 0 1 0 0 0 1 1 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1063.5662 Q9NZN5 Q9NZN5 63 71 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 2 0.0045125 75.109 By MS/MS By matching 1 1 1426300 641940 784330 2779 2080 2981 6287;6288 5225 5225 4450 1 SEIYGLVQRCVIIQK KSSSEESRSEIYGLVQ QRCVIIQKDDNGFGLT R S E Q K D 0 1 0 0 1 2 1 1 0 3 1 1 0 0 0 1 0 0 1 2 0 0 15 1 1804.9869 Q9NZN5 Q9NZN5 63 77 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 3 0.015034 45.79 By matching By MS/MS 1 1 955620 479680 475940 2780 2080 2982 6289;6290 5226 5226 4450 1 SELGNQSPSTSSR MQNDSILKSELGNQSP QSPSTSSRQVTGQPQN K S E S R Q 0 1 1 0 0 1 1 1 0 0 1 0 0 0 1 5 1 0 0 0 0 0 13 0 1348.6219 A0A0A0MSK5;J3KN66;Q5JTV8;H0YD16 A0A0A0MSK5 188 200 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 2 0.0019199 77.372 By MS/MS By MS/MS 1 1 1844800 834780 1010000 2781 164 2983 6291;6292 5227;5228 5228 226;3269 2 SELNEIKENQRSPVR ERWIKGDKSELNEIKE ENQRSPVRVKERKITD K S E V R V 0 2 2 0 0 1 3 0 0 1 1 1 0 0 1 2 0 0 0 1 0 0 15 2 1797.9333 C9JM79;E9PG73;Q13427 C9JM79 379 393 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 3 0.0047373 64.313 By matching By MS/MS 1 1 5308300 3117300 2191000 2782 472 2984 6293;6294 5229 5229 660 1 SELSQDAEPAGSQETK ERRSLRKRSELSQDAE PAGSQETKDSGSQEVL R S E T K D 2 0 0 1 0 2 3 1 0 0 1 1 0 0 1 3 1 0 0 0 0 0 16 0 1675.7537 X6RJY0;Q9BVJ6 X6RJY0 266 281 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 0.0065901 68.576 By MS/MS By matching 1 1 2446200 1489700 956500 2783 1964 2985 6295;6296 5230 5230 3914 1 SELVTVTESFSTPK MQTSESTKSELVTVTE TESFSTPKFHISPTGM K S E P K F 0 0 0 0 0 0 2 0 0 0 1 1 0 1 1 3 3 0 0 2 0 0 14 0 1523.7719 A0A075B738;P16284 A0A075B738 224 237 PECAM1 Platelet endothelial cell adhesion molecule yes no 2 0.020209 41.283 By matching By MS/MS 1 1 1376200 724970 651190 2784 12 2986 6297;6298 5231 5231 3207;3208 0 SENEDIYYK EDLSPSRRSENEDIYY ENEDIYYKSMPNLGAG R S E Y K S 0 0 1 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 2 0 0 0 9 0 1159.5033 H0Y3V3;H0Y5C0;B1ALU1;B1ALU3;O95490 H0Y3V3 412 420 ADGRL2;LPHN2 Latrophilin-2 yes no 2 0.0048621 79.713 By MS/MS By MS/MS 1 1 1439300 754190 685120 2785 360 2987 6299;6300 5232;5233 5233 4082;4083 2 SEPHSPGIPEIFR SSSSKGIKSEPHSPGI PGIPEIFRTASQRCRD K S E F R T 0 1 0 0 0 0 2 1 1 2 0 0 0 1 3 2 0 0 0 0 0 0 13 0 1464.7361 Q9UJJ2;Q8ND82 Q9UJJ2 76 88 ZNF280C Zinc finger protein 280C yes no 2;3 2.5753E-06 107.11 By MS/MS By MS/MS 1 2 16905000 2563500 14342000 2786 1797 2988 6301;6302;6303 5234;5235;5236 5236 2526 3 SEPRPPISSPR PEAEPESKSEPRPPIS RPPISSPRAPQTRAVK K S E P R A 0 2 0 0 0 0 1 0 0 1 0 0 0 0 4 3 0 0 0 0 0 0 11 1 1221.6466 E7EX40;Q6WKZ4 E7EX40 373 383 RAB11FIP1 Rab11 family-interacting protein 1 yes no 3 0.017571 52.555 By MS/MS 1 0 0 0 2787 603 2989 6304 5237 5237 832 1 SEPSLEPESFRSPTFGK SSRHPSYRSEPSLEPE FRSPTFGKSFHFDPLS R S E G K S 0 1 0 0 0 0 3 1 0 0 1 1 0 2 3 4 1 0 0 0 0 0 17 1 1893.9109 H0YEF4;Q9C0B5 H0YEF4 232 248 ZDHHC5 Palmitoyltransferase;Palmitoyltransferase ZDHHC5 yes no 3 0.020583 45.14 By MS/MS 1 1028100 0 1028100 2788 879 2990 6305 5238 5238 1186 0 SESAPTLHPYSPLSPK GADTPFGRSESAPTLH PYSPLSPKGRPSSPRT R S E P K G 1 0 0 0 0 0 1 0 1 0 2 1 0 0 4 4 1 0 1 0 0 0 16 0 1709.8625 Q8WUF5;K7EN03 Q8WUF5 100 115 PPP1R13L RelA-associated inhibitor yes no 3 0.00076713 88.075 By matching By MS/MS 1 1 1502300 800490 701800 2789 1833 2991 6306;6307 5239 5239 3867 1 SESENWR GRKHEFIRSESENWRI RSESENWRIFREEQNG R S E W R I 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 7 0 906.38316 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1;C9JH78;C9IYH5 I1E4Y6 221 227 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 8.2349E-06 137.14 By MS/MS By MS/MS 2 2 6492700 2334200 4158500 2790 979 2992 6308;6309;6310;6311 5240;5241;5242;5243 5241 1313 4 SESGYGFNVR PRVVRIVKSESGYGFN SGYGFNVRGQEPREC_ K S E V R G 0 1 1 0 0 0 1 2 0 0 0 0 0 1 0 2 0 0 1 1 0 0 10 0 1114.5043 H7C603;Q96L92 H7C603 49 58 SNX27 Sorting nexin-27 yes no 2 0.0021447 87.298 By MS/MS By MS/MS 1 1 3658200 1487300 2170800 2791 976 2993 6312;6313 5244;5245 5245 1307 2 SESHTDLTFSR QIIRNYARSESHTDLT HTDLTFSRELTNDERK R S E S R E 0 1 0 1 0 0 1 0 1 0 1 0 0 1 0 3 2 0 0 0 0 0 11 0 1278.584 O15226 O15226 616 626 NKRF NF-kappa-B-repressing factor yes yes 2 0.0082672 64.945 By MS/MS By matching 1 1 5133100 2453200 2679900 2792 1108 2994 6314;6315 5246 5246 1478 1 SESLDPDSSMDTTLILK SASRIRERSESLDPDS MDTTLILKDTEAVMAF R S E L K D 0 0 0 3 0 0 1 0 0 1 3 1 1 0 1 4 2 0 0 0 0 0 17 0 1850.8819 H0Y2V6;Q5SW79 H0Y2V6 843 859 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0017049 77.324 By matching By MS/MS 1 1 2965900 1508600 1457300 2793 815 2995 6316;6317 5247 5247 1093 1 SESLTAESR EGGGLMTRSESLTAES ESLTAESRLVHTSPNY R S E S R L 1 1 0 0 0 0 2 0 0 0 1 0 0 0 0 3 1 0 0 0 0 0 9 0 978.4618 Q15751;H0YNB1 Q15751 1489 1497 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes no 2 0.021695 63.694 By MS/MS 1 0 0 0 2794 1567 2996 6318 5248 5248 2164 1 SESMPVQLNK QQQQRLMKSESMPVQL SMPVQLNKGDVVTGSD K S E N K G 0 0 1 0 0 1 1 0 0 0 1 1 1 0 1 2 0 0 0 1 0 0 10 0 1131.5594 C9J3F6;Q92609 C9J3F6 472 481 TBC1D5 TBC1 domain family member 5 yes no 2 0.0097752 65.278 By matching By MS/MS 1 1 3350300 1413700 1936600 2795 438 2997 6319;6320 5249 5249 630 1 SESPKEPEQLR ________________ PKEPEQLRKLFIGGLS K S E L R K 0 1 0 0 0 1 3 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 11 1 1298.6466 F8W6I7;P09651;F8VTQ5;F8W646 F8W6I7 4 14 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 2;3 8.7677E-33 159.12 By MS/MS By MS/MS 3 3 229320000 102420000 126900000 2796 752 2998;2999 6321;6322;6323;6324;6325;6326 5250;5251;5252;5253 5252 996 3 SESPKEPEQLRK ________________ KEPEQLRKLFIGGLSF K S E R K L 0 1 0 0 0 1 3 0 0 0 1 2 0 0 2 2 0 0 0 0 0 0 12 2 1426.7416 F8W6I7;P09651;F8VTQ5;F8W646 F8W6I7 4 15 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 3 0.002379 80.507 By MS/MS By MS/MS 1 1 101070000 42617000 58452000 2797 752 3000 6327;6328 5254;5255 5254 996 2 SESPPAELPSLR LRKSTKKRSESPPAEL PAELPSLRRSTRQKTT R S E L R R 1 1 0 0 0 0 2 0 0 0 2 0 0 0 3 3 0 0 0 0 0 0 12 0 1281.6565 Q14669;H7C1L9;G5E9G6 Q14669 310 321 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.0013042 92.295 By MS/MS By MS/MS 1 1 8913500 4516000 4397500 2798 1522 3001 6329;6330 5256;5257 5256 2089 2 SESPPPLSDPK TSAITASRSESPPPLS PPPLSDPKQAKVVARR R S E P K Q 0 0 0 1 0 0 1 0 0 0 1 1 0 0 4 3 0 0 0 0 0 0 11 0 1152.5663 Q15059 Q15059 261 271 BRD3 Bromodomain-containing protein 3 yes yes 2 6.7372E-05 112.64 By MS/MS By MS/MS 1 1 23496000 11629000 11868000 2799 1542 3002 6331;6332 5258;5259;5260;5261;5262 5259 2128 5 SESSDFEVVPK QREESETRSESSDFEV SDFEVVPKRRRQRGSE R S E P K R 0 0 0 1 0 0 2 0 0 0 0 1 0 1 1 3 0 0 0 2 0 0 11 0 1222.5717 E7EPN9;Q9Y520 E7EPN9 1248 1258 PRRC2C Protein PRRC2C yes no 2 0.0060099 69.815 By MS/MS By matching 1 1 1281400 721370 560080 2800 570 3003 6333;6334 5263 5263 759 1 SESSGILPNTTDMR QTHPPCRRSESSGILP LPNTTDMRLRPGTRRD R S E M R L 0 1 1 1 0 0 1 1 0 1 1 0 1 0 1 3 2 0 0 0 0 0 14 0 1506.6984 Q92667;I3L2A2;I3L2N7;I3L0K6 Q92667 105 118 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.0032992 70.373 By MS/MS By MS/MS 2 2 5473400 2716200 2757200 2801 1857 3004;3005 6335;6336;6337;6338 5264;5265;5266 5266 265 2620;2621 3 SESVEGFLSPSR HSGKRTPRSESVEGFL EGFLSPSRCGSRNGEK R S E S R C 0 1 0 0 0 0 2 1 0 0 1 0 0 1 1 4 0 0 0 1 0 0 12 0 1293.6201 Q08AD1 Q08AD1 1311 1322 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 1.342E-09 126.09 By MS/MS By MS/MS 1 1 2200900 1121400 1079500 2802 1472 3006 6339;6340 5267;5268 5267 1985 2 SESVVSGLDSPAK KALGILGRSESVVSGL SGLDSPAKTSSMEKKL R S E A K T 1 0 0 1 0 0 1 1 0 0 1 1 0 0 1 4 0 0 0 2 0 0 13 0 1274.6354 H7BYJ3;O14578 H7BYJ3 59 71 CIT Citron Rho-interacting kinase yes no 2 0.013994 56.29 By matching By MS/MS 1 1 3404500 1712700 1691800 2803 942 3007 6341;6342 5269 5269 1268 1 SESVVYADIR HHSDKINKSESVVYAD SVVYADIRKN______ K S E I R K 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 2 0 0 1 2 0 0 10 0 1137.5666 O95297 O95297 258 267 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.00058905 105.4 By MS/MS By MS/MS 1 1 21101000 9120200 11981000 2804 1189 3008 6343;6344 5270;5271 5270 4254 2 SETAPAAPAAPAPAEKTPVK ________________ PAEKTPVKKKARKSAG M S E V K K 7 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 2 0 0 1 0 0 20 1 1903.0051 P10412 P10412 2 21 HIST1H1E Histone H1.4 yes yes 2;3 0.011471 77.576 By matching By MS/MS 2 2 23620000 11014000 12606000 2805 1250 3009 6345;6346;6347;6348 5272;5273 5272 3646 2 SETAPAAPAAPAPAEKTPVKK ________________ AEKTPVKKKARKSAGA M S E K K K 7 0 0 0 0 0 2 0 0 0 0 3 0 0 5 1 2 0 0 1 0 0 21 2 2031.1001 P10412 P10412 2 22 HIST1H1E Histone H1.4 yes yes 3 0.012432 82.885 By MS/MS By matching 1 1 5521100 3522600 1998500 2806 1250 3010 6349;6350 5274 5274 3646 1 SETSWESPK SVPPSQTKSETSWESP ETSWESPKQIKKKKKA K S E P K Q 0 0 0 0 0 0 2 0 0 0 0 1 0 0 1 3 1 1 0 0 0 0 9 0 1049.4666 E5RJU9;Q86UE4 E5RJU9 506 514 MTDH Protein LYRIC yes no 2 0.020134 61.815 By matching By MS/MS 1 1 2056600 1014800 1041800 2807 555 3011 6351;6352 5275 5275 736 1 SEVQQPVHPKPLSPDSR DSRDSQVKSEVQQPVH KPLSPDSRASSLSESS K S E S R A 0 1 0 1 0 2 1 0 1 0 1 1 0 0 4 3 0 0 0 2 0 0 17 1 1899.9803 F8VS07;F8VQE1;Q9UHB6;F8VRN8 F8VS07 48 64 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0020868 61.265 By MS/MS By MS/MS 1 1 14663000 6665700 7997700 2808 733 3012 6353;6354 5276;5277 5276 977 2 SFAPSTPLTGR QQHFEKKRSFAPSTPL PSTPLTGRRYLREKEA R S F G R R 1 1 0 0 0 0 0 1 0 0 1 0 0 1 2 2 2 0 0 0 0 0 11 0 1132.5877 P28749;H0YE05 P28749 364 374 RBL1 Retinoblastoma-like protein 1 yes no 2 0.021627 66.326 By MS/MS 1 1002500 1002500 0 2809 1321 3013 6355 5278 5278 3673 1 SFDEVEGVFGR GECGFYQRSFDEVEGV EVEGVFGRGGGREMHR R S F G R G 0 1 0 1 0 0 2 2 0 0 0 0 0 2 0 1 0 0 0 2 0 0 11 0 1240.5724 I1E4Y6;Q6Y7W6;E7ESB6;C9JW88 I1E4Y6 139 149 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 0.00062574 104.07 By matching By MS/MS 1 1 1933200 913860 1019300 2810 979 3014 6356;6357 5279 5279 1314 1 SFDHLISDTK KKLLGTRKSFDHLISD DHLISDTKAPKRQEME K S F T K A 0 0 0 2 0 0 0 0 1 1 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1161.5666 J3QSG6;H0Y465;P21359 J3QSG6 338 347 NF1 Neurofibromin;Neurofibromin truncated yes no 2 1.0306E-13 144.55 By MS/MS By MS/MS 1 1 18537000 7081900 11455000 2811 824 3015 6358;6359 5280;5281 5281 1107 2 SFDYNYR ERRRSRSRSFDYNYRR RSFDYNYRRSYSPRNR R S F Y R R 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 2 0 0 0 7 0 963.40865 Q5JRI1;O75494 Q5JRI1 133 139 SRSF10 Serine/arginine-rich splicing factor 10 yes no 2 0.019621 84.743 By matching By MS/MS 1 1 7798800 2822300 4976500 2812 1164 3016 6360;6361 5282 5282 1555 1 SFEEEGEHLGSR RLEAVTARSFEEEGEH EGEHLGSRKHRMSEEK R S F S R K 0 1 0 0 0 0 4 2 1 0 1 0 0 1 0 2 0 0 0 0 0 0 12 0 1375.6004 Q9BXW6 Q9BXW6 499 510 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 2 7.5126E-06 111.31 By matching By MS/MS 1 1 16551000 7541200 9010300 2813 1976 3017 6362;6363 5283 5283 2808 1 SFESTVGQGSDTYIYIFR RLKPLFNKSFESTVGQ DTYIYIFRVCREAGNH K S F F R V 0 1 0 1 0 1 1 2 0 2 0 0 0 2 0 3 2 0 2 1 0 0 18 0 2068.9742 F5GXE0;H0YGE9;F5GXU0;F5H883;F5GX30;P20645 F5GXE0 59 76 M6PR Cation-dependent mannose-6-phosphate receptor yes no 2 5.9655E-29 120.87 By MS/MS 1 2857900 2857900 0 2814 700 3018 6364 5284 5284 1 SFEVEEVETPNSTPPR GTINTLKRSFEVEEVE TPNSTPPRRVQTPLLR R S F P R R 0 1 1 0 0 0 4 0 0 0 0 0 0 1 3 2 2 0 0 2 0 0 16 0 1816.8479 K7ENL0;Q9UHD8;K7EJV0;K7EPY1 K7ENL0 15 30 SEPT9 Septin-9 yes no 2 1.3255E-29 134.81 By MS/MS By MS/MS 1 1 8241800 3703600 4538300 2815 1049 3019 6365;6366 5285;5286;5287;5288;5289 5286 1386 5 SFLSEPSSPGR ________________ SEPSSPGRTKTTKGFK R S F G R T 0 1 0 0 0 0 1 1 0 0 1 0 0 1 2 4 0 0 0 0 0 0 11 0 1162.5619 H0YC41;Q69YN4 H0YC41 5 15 KIAA1429 Protein virilizer homolog yes no 2 1.88E-31 153.54 By MS/MS By MS/MS 1 1 20514000 9574200 10940000 2816 871 3020 6367;6368 5290;5291 5291 1169;1170 2 SFLSEPSSPGRTK ________________ PSSPGRTKTTKGFKLG R S F T K T 0 1 0 0 0 0 1 1 0 0 1 1 0 1 2 4 1 0 0 0 0 0 13 1 1391.7045 H0YC41;Q69YN4 H0YC41 5 17 KIAA1429 Protein virilizer homolog yes no 2 0.0012441 79.639 By matching By MS/MS 1 1 7016900 3538800 3478100 2817 871 3021 6369;6370 5292 5292 1169;1170 1 SFLVASVLPGPDGNINSPTR DCPELVQRSFLVASVL GNINSPTRNADMQEEL R S F T R N 1 1 2 1 0 0 0 2 0 1 2 0 0 1 3 3 1 0 0 2 0 0 20 0 2040.064 Q7Z3K3 Q7Z3K3 1322 1341 POGZ Pogo transposable element with ZNF domain yes yes 2 0.0069911 58.159 By matching By MS/MS 1 1 2219000 1376100 842920 2818 1711 3022 6371;6372 5293 5293 2392 1 SFMERSHQRQK EAFIKRKKSFMERSHQ ERSHQRQKEIRNKIHV K S F Q K E 0 2 0 0 0 2 1 0 1 0 0 1 1 1 0 2 0 0 0 0 0 0 11 2 1432.6994 Q9C0D2;E9PJY3 Q9C0D2 2489 2499 CEP295 Centrosomal protein of 295 kDa yes no 2 0.016715 55.04 By MS/MS 1 0 0 0 2819 1986 3023 6373 5294 5294 2834;2835 1 SFMPNLVPPK EESKPKPRSFMPNLVP MPNLVPPKIPDGERVD R S F P K I 0 0 1 0 0 0 0 0 0 0 1 1 1 1 3 1 0 0 0 1 0 0 10 0 1128.6002 C9JM61;C9JDF8;E7EPN8;Q7Z554;E7EPW4;A0A0A0MRJ5;A0A0A0MRJ4;P45379 C9JM61 68 77 TNNT2;HNTN1 Troponin T, cardiac muscle yes no 3 0.014405 43.635 By MS/MS 1 0 0 0 2820 143 3024 6374 5295 5295 23 21 1 SFNQNSHLIIHQR YKCNECGKSFNQNSHL SHLIIHQRIHTGEKPY K S F Q R I 0 1 2 0 0 2 0 0 2 2 1 0 0 1 0 2 0 0 0 0 0 0 13 0 1592.8172 Q9P0L1 Q9P0L1 643 655 ZKSCAN7 Zinc finger protein with KRAB and SCAN domains 7 yes yes 3 0.0029361 56.872 By MS/MS 1 2838900 0 2838900 2821 2082 3025 6375 5296 5296 310;311;451 2989 1 SFSADNFIGIQR LCRAAMRRSFSADNFI DNFIGIQRSKAILS__ R S F Q R S 1 1 1 1 0 1 0 1 0 2 0 0 0 2 0 2 0 0 0 0 0 0 12 0 1353.6677 Q8N7R7 Q8N7R7 342 353 CCNYL1 Cyclin-Y-like protein 1 yes yes 2 0.0021955 77.185 By MS/MS By MS/MS 1 1 11894000 5345200 6548800 2822 1783 3026 6376;6377 5297;5298 5298 2506 2 SFSAHCTQVVNAK KVKRRSPKSFSAHCTQ CTQVVNAKKNAIPVSK K S F A K K 2 0 1 0 1 1 0 0 1 0 0 1 0 1 0 2 1 0 0 2 0 0 13 0 1447.6878 B4DUJ5;Q8IWP9 B4DUJ5 13 25 CCDC28A Coiled-coil domain-containing protein 28A yes no 2 0.00064934 77.633 By matching By MS/MS 1 1 2480600 1360000 1120600 2823 381 3027 6378;6379 5299 5299 544 1 SFSASQSTDREGASPVTEVR VLQPHRLRSFSASQST ASPVTEVRIKTEPSSP R S F V R I 2 2 0 1 0 1 2 1 0 0 0 0 0 1 1 5 2 0 0 2 0 0 20 1 2109.9927 Q9ULJ3 Q9ULJ3 409 428 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 3 0.019155 43.463 By MS/MS By matching 1 1 5985000 3064100 2921000 2824 2119 3028 6380;6381 5300 5300 3036 1 SFSEDVFQSVK KTKASVRKSFSEDVFQ EDVFQSVKSLLQSQKE K S F V K S 0 0 0 1 0 1 1 0 0 0 0 1 0 2 0 3 0 0 0 2 0 0 11 0 1271.6034 Q9UKA4 Q9UKA4 18 28 AKAP11 A-kinase anchor protein 11 yes yes 2 0.0047652 73.881 By MS/MS By MS/MS 1 1 1434500 727730 706810 2825 2106 3029 6382;6383 5301;5302 5302 3016 2 SFSEPFGR ________________ SFSEPFGRDLLSISDG R S F G R D 0 1 0 0 0 0 1 1 0 0 0 0 0 2 1 2 0 0 0 0 0 0 8 0 925.42938 C9K0D3;C9J3M3;P58340 C9K0D3 7 14 MLF1 Myeloid leukemia factor 1 yes no 2 0.021097 74.165 By MS/MS By matching 1 1 6836900 3652600 3184300 2826 439 3030 6384;6385 5303 5303 631 1 SFSHNSSLIKHQRIHSR YECTECGKSFSHNSSL KHQRIHSR________ K S F S R - 0 2 1 0 0 1 0 0 3 2 1 1 0 1 0 5 0 0 0 0 0 0 17 2 2033.0667 Q13106 Q13106 421 437 ZNF154 Zinc finger protein 154 yes yes 3 0.022029 41.014 By MS/MS 1 0 0 0 2827 1489 3031 6386 5304 5304 2030;2031;2032;2033 1 SFSKEELMSSDLEETAGSTSIPK FSKPKKKKSFSKEELM AGSTSIPKRKKSTPKE K S F P K R 1 0 0 1 0 0 4 1 0 1 2 2 1 1 1 6 2 0 0 0 0 0 23 1 2472.1578 O00567 O00567 511 533 NOP56 Nucleolar protein 56 yes yes 2;3 1.0151E-05 90.907 By MS/MS By MS/MS 2 3 75870000 21252000 54619000 2828 1088 3032;3033 6387;6388;6389;6390;6391 5305;5306;5307;5308;5309 5308 126 1432;1433 5 SFSKEVEER ARTPATKRSFSKEVEE FSKEVEERSRERPSQP R S F E R S 0 1 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 9 1 1109.5353 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1022 1030 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2;3 0.005592 85.924 By MS/MS By MS/MS 3 3 76770000 41940000 34830000 2829 595 3034 6392;6393;6394;6395;6396;6397 5310;5311;5312;5313;5314;5315 5314 808;809 5 SFSKEVEERSR ARTPATKRSFSKEVEE KEVEERSRERPSQPEG R S F S R E 0 2 0 0 0 0 3 0 0 0 0 1 0 1 0 3 0 0 0 1 0 0 11 2 1352.6684 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1022 1032 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 0.0050201 81.327 By MS/MS By matching 1 1 11903000 5291000 6611500 2830 595 3035 6398;6399 5316 5316 808;809;810 1 SFSLASSSNSPISQR NNPPLKSRSFSLASSS SNSPISQRRPSQNAIS R S F Q R R 1 1 1 0 0 1 0 0 0 1 1 0 0 1 1 7 0 0 0 0 0 0 15 0 1566.7638 Q9BXB4 Q9BXB4 172 186 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 2 3.7702E-38 150.11 By MS/MS By MS/MS 4 5 31490000 14272000 17218000 2831 1973 3036;3037 6400;6401;6402;6403;6404;6405;6406;6407;6408 5317;5318;5319;5320;5321;5322;5323 5319 2800;2801;2802;2803;2804;2805 7 SFSMQDLR GALAGRLRSFSMQDLR SFSMQDLRSISDAPAP R S F L R S 0 1 0 1 0 1 0 0 0 0 1 0 1 1 0 2 0 0 0 0 0 0 8 0 982.45422 E5RGS2;Q9H6H4 E5RGS2 150 157 REEP4 Receptor expression-enhancing protein;Receptor expression-enhancing protein 4 yes no 2 0.0057769 108.31 By MS/MS By MS/MS 1 1 16019000 8121500 7897700 2832 549 3038 6409;6410 5324;5325 5324 731 2 SFSMQDLTTIR GALSERLRSFSMQDLT MQDLTTIRGDGAPAPS R S F I R G 0 1 0 1 0 1 0 0 0 1 1 0 1 1 0 2 2 0 0 0 0 0 11 0 1297.6336 E7EUF7;A0A1C7CYY3;Q9H902 E7EUF7 157 167 REEP1 Receptor expression-enhancing protein;Receptor expression-enhancing protein 1 yes no 2 0.017769 57.175 By MS/MS By MS/MS 1 1 873720 390730 483000 2833 307 3039 6411;6412 5326;5327 5327 439 2 SFSSPENFQR SSAQIIQRSFSSPENF SSPENFQRQAVMNSAL R S F Q R Q 0 1 1 0 0 1 1 0 0 0 0 0 0 2 1 3 0 0 0 0 0 0 10 0 1197.5415 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 14 23 RBM7 RNA-binding protein 7 yes no 2 0.0021039 92.611 By matching By MS/MS 1 1 30166000 14906000 15261000 2834 785 3040 6413;6414 5328 5328 1044 1 SFSSQRPVDR PKREIAKRSFSSQRPV SSQRPVDRQNRRGNNG R S F D R Q 0 2 0 1 0 1 0 0 0 0 0 0 0 1 1 3 0 0 0 1 0 0 10 1 1177.584 E7EPN9;Q9Y520;H7C5N8 E7EPN9 1544 1553 PRRC2C Protein PRRC2C yes no 2 0.017198 72.34 By MS/MS By matching 1 1 60362000 28758000 31604000 2835 570 3041 6415;6416 5329 5329 760 1 SFSSSAEEHS LRNHIRSRSFSSSAEE SSSAEEHS________ R S F H S - 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 5 0 0 0 0 0 0 10 0 1066.4203 Q96EQ0 Q96EQ0 295 304 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 2 5.537E-06 128.6 By MS/MS By MS/MS 1 1 10479000 4358400 6121100 2836 1888 3042 6417;6418 5330;5331;5332;5333 5330 2665 4 SFTLDDESLK RSSSSRSRSFTLDDES TLDDESLKYLTHEEKD R S F L K Y 0 0 0 2 0 0 1 0 0 0 2 1 0 1 0 2 1 0 0 0 0 0 10 0 1153.5503 X6RHS9;Q86WR7 X6RHS9 43 52 PROSER2 Proline and serine-rich protein 2 yes no 2 0.012474 83.081 By matching By MS/MS 1 1 2476200 1324400 1151900 2837 1735 3043 6419;6420 5334 5334 3843 1 SFVPEEEKHEER TRTRGRKRSFVPEEEK EEEKHEERVPRERRQR R S F E R V 0 1 0 0 0 0 5 0 1 0 0 1 0 1 1 1 0 0 0 1 0 0 12 1 1514.7001 A0A0U1RRH6;O94880 A0A0U1RRH6 835 846 PHF14 PHD finger protein 14 yes no 3 0.00081273 85.976 By MS/MS By MS/MS 1 1 5844900 3060200 2784700 2838 276 3044 6421;6422 5335;5336 5336 391 2 SGAHSSASPPR FDWGYEERSGAHSSAS HSSASPPRSRSRDRSH R S G P R S 2 1 0 0 0 0 0 1 1 0 0 0 0 0 2 4 0 0 0 0 0 0 11 0 1052.4999 P18615;A0A0A0MT02;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 174 184 NELFE Negative elongation factor E yes no 2;3 0.0025058 84.352 By matching By MS/MS 1 2 19911000 8270100 11641000 2839 1289 3045 6423;6424;6425 5337;5338 5337 1692;1693 2 SGAQASSTPLSPTR PSQRRATRSGAQASST STPLSPTRITRLQEKE R S G T R I 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 4 2 0 0 0 0 0 14 0 1358.679 Q3BDU5;P02545 Q3BDU5 12 25 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.00032745 78.249 By matching By MS/MS 1 1 10246000 5485200 4760800 2840 1211 3046 6426;6427 5339 5339 1611;3637 1 SGASEANLIVAK QMICSKRRSGASEANL EANLIVAKSWADVVKL R S G A K S 3 0 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 12 0 1158.6245 P46013 P46013 648 659 MKI67 Antigen KI-67 yes yes 2 0.0050334 69.716 By matching By MS/MS 1 1 2462500 1116000 1346500 2841 1361 3047 6428;6429 5340 5340 1791 1 SGCSEAQPPESPETR IPFGGDTKSGCSEAQP PPESPETRLGQPAAEQ K S G T R L 1 1 0 0 1 1 3 1 0 0 0 0 0 0 3 3 1 0 0 0 0 0 15 0 1630.6893 Q9Y6A5;H0Y8F2 Q9Y6A5 424 438 TACC3 Transforming acidic coiled-coil-containing protein 3 yes no 2 0.014645 60.55 By MS/MS By matching 1 1 5366600 2740100 2626500 2842 2175 3048 6430;6431 5341 5341 3985 1 SGEGEVSGLMR VSGVKRSRSGEGEVSG GEVSGLMRKVPRVSLE R S G M R K 0 1 0 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 0 1 0 0 11 0 1120.5183 Q13263;M0R0K9 Q13263 473 483 TRIM28 Transcription intermediary factor 1-beta yes no 2 0.001589 96.334 By matching By MS/MS 1 1 18528000 6518900 12009000 2843 1498 3049 6432;6433 5342 5342 2051 1 SGEISLPIKEEPSPISK DLFDILIKSGEISLPI EEPSPISKMRPVTASI K S G S K M 0 0 0 0 0 0 3 1 0 3 1 2 0 0 3 4 0 0 0 0 0 0 17 1 1809.9724 I3L2A0;Q9ULH7 I3L2A0 12 28 MKL2 MKL/myocardin-like protein 2 yes no 3 0.0010871 73.296 By MS/MS By MS/MS 1 1 3124700 1717500 1407200 2844 986 3050 6434;6435 5343;5344 5343 1323 2 SGEQITSSPVSPK GTGRRRRRSGEQITSS TSSPVSPKSLAFTSSI R S G P K S 0 0 0 0 0 1 1 1 0 1 0 1 0 0 2 4 1 0 0 1 0 0 13 0 1315.662 A0A087WWN8;A0A087WZV0;O43314 A0A087WWN8 187 199 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes no 2 0.020123 58.699 By MS/MS By MS/MS 1 1 670880 670880 0 2845 66 3051 6436;6437 5345;5346 5346 87;88;89 1 SGFGEISSPVIR ________________ EISSPVIREAEVTRTA R S G I R E 0 1 0 0 0 0 1 2 0 2 0 0 0 1 1 3 0 0 0 1 0 0 12 0 1247.651 G3V1T4;P57740 G3V1T4 4 15 NUP107 Nuclear pore complex protein Nup107 yes no 2 8.6321E-79 176.99 By MS/MS By MS/MS 1 1 27414000 9566600 17847000 2846 784 3052 6438;6439 5347;5348 5348 1041 2 SGGLQTPECLSREGSPIPHDPEFGSK HPGLMSPRSGGLQTPE HDPEFGSKLASVPEYR R S G S K L 0 1 0 1 1 1 3 4 1 1 2 1 0 1 4 4 1 0 0 0 0 0 26 1 2781.3028 P85037 P85037 431 456 FOXK1 Forkhead box protein K1 yes yes 3 0.011289 48.489 By MS/MS By matching 1 1 11863000 6692600 5169900 2847 1445 3053 6440;6441 5349 5349 1927;1928 1 SGGNEVSIEER EQVESKRKSGGNEVSI NEVSIEERLGAMDIDT K S G E R L 0 1 1 0 0 0 3 2 0 1 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1175.5418 Q15061 Q15061 431 441 WDR43 WD repeat-containing protein 43 yes yes 2 0.0077077 66.004 By matching By MS/MS 1 1 1745400 860170 885250 2848 1543 3054 6442;6443 5350 5350 2130 1 SGGSGHAVAEPASPEQELDQNKGK VSRKSRPKSGGSGHAV ELDQNKGKGRDVESVQ K S G G K G 3 0 1 1 0 2 3 4 1 0 1 2 0 0 2 3 0 0 0 1 0 0 24 1 2392.1255 P46013 P46013 296 319 MKI67 Antigen KI-67 yes yes 3 0.014564 42.384 By MS/MS 1 5767500 5767500 0 2849 1361 3055 6444 5351 5351 1792 1 SGGVTEASSLLGGSPR YSTRGDQRSGGVTEAS SLLGGSPRRPCGRKGS R S G P R R 1 1 0 0 0 0 1 4 0 0 2 0 0 0 1 4 1 0 0 1 0 0 16 0 1473.7423 Q92729 Q92729 840 855 PTPRU Receptor-type tyrosine-protein phosphatase U yes yes 2 0.0016802 71.697 By MS/MS By MS/MS 1 1 2805700 1393100 1412600 2850 1859 3056 6445;6446 5352;5353 5352 2624 2 SGKNSQEDSEDSEDKDVK REAKNKRRSGKNSQED DSEDKDVKTKKDDSHS R S G V K T 0 0 1 4 0 1 3 1 0 0 0 3 0 0 0 4 0 0 0 1 0 0 18 2 1995.8505 Q9H1E3 Q9H1E3 50 67 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 4.0895E-08 100.97 By MS/MS By MS/MS 3 3 219780000 99942000 119840000 2851 1992 3057;3058 6447;6448;6449;6450;6451;6452 5354;5355;5356;5357 5357 2849;2850 4 SGLTVPTSPK DSGSDALRSGLTVPTS LTVPTSPKGRLLDRRS R S G P K G 0 0 0 0 0 0 0 1 0 0 1 1 0 0 2 2 2 0 0 1 0 0 10 0 985.54441 Q53EL6;Q5VZS7 Q53EL6 87 96 PDCD4 Programmed cell death protein 4 yes no 2 0.0005875 109.39 By MS/MS By MS/MS 1 1 171610000 80526000 91082000 2852 1593 3059 6453;6454 5358;5359 5359 2211;3784 2 SGLTVPTSPKGR DSGSDALRSGLTVPTS VPTSPKGRLLDRRSRS R S G G R L 0 1 0 0 0 0 0 2 0 0 1 1 0 0 2 2 2 0 0 1 0 0 12 1 1198.667 Q53EL6;Q5VZS7 Q53EL6 87 98 PDCD4 Programmed cell death protein 4 yes no 2 0.014249 73.887 By matching By MS/MS 1 1 3233900 1790500 1443400 2853 1593 3060 6455;6456 5360 5360 2211;3784 1 SGNTFRPEVHLLPPPSEELALNELVTLTCLAR PLTATLSKSGNTFRPE VTLTCLARGFSPKDVL K S G A R G 2 2 2 0 1 0 4 1 1 0 7 0 0 1 4 2 3 0 0 2 0 0 32 1 3572.8661 P01876;A0A0G2JMB2;P01877 P01876 222 253 IGHA1;IGHA2 Ig alpha-1 chain C region;Ig alpha-2 chain C region yes no 4 0.00019106 53.091 By MS/MS By MS/MS 1 1 24111000 18394000 5716400 2854 1210 3061 6457;6458 5361;5362 5362 2 SGPLEACYGELGQSR SRMLRQQRSGPLEACY YGELGQSRMYFNASGP R S G S R M 1 1 0 0 1 1 2 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 15 0 1622.7359 Q9NXD2 Q9NXD2 701 715 MTMR10 Myotubularin-related protein 10 yes yes 2 9.9654E-06 95.417 By MS/MS By MS/MS 1 1 3449100 1448800 2000300 2855 2067 3062 6459;6460 5363;5364 5364 4447 2 SGSAAQAEGLCK AGLRKRGRSGSAAQAE AQAEGLCKQWLQRAWQ R S G C K Q 3 0 0 0 1 1 1 2 0 0 1 1 0 0 0 2 0 0 0 0 0 0 12 0 1177.5397 F8WF93;H7BZZ2;F8WE30;H7C0X4;Q92685 F8WF93 11 22 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase yes no 2 0.0014898 83.087 By MS/MS By MS/MS 2 2 5846100 2753900 3092300 2856 770 3063 6461;6462;6463;6464 5365;5366;5367;5368 5368 1026 4 SGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASK DLNKTRLRSGSALLQS SSQSSASKASQEDANE R S G S K A 3 0 0 4 0 3 4 1 0 0 4 3 0 0 3 11 1 0 0 0 0 0 37 2 3834.7767 Q5VTR2 Q5VTR2 515 551 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 4 0.0027504 41.9 By matching By MS/MS 1 1 19716000 9145800 10570000 2857 1645 3064 6465;6466 5369 5369 2301 1 SGSGISVISSTSVDQR PPSFRRVRSGSGISVI SSTSVDQRLPEEPVLE R S G Q R L 0 1 0 1 0 1 0 2 0 2 0 0 0 0 0 6 1 0 0 2 0 0 16 0 1578.7849 D6PAW0;C9JQZ7;A8CTZ0;F8W7U0;Q15811 D6PAW0 197 212 ITSN1 Intersectin-1 yes no 2 0.00055805 89.484 By MS/MS By MS/MS 1 1 11620000 5235200 6385100 2858 337 3065 6467;6468 5370;5371 5371 476;477 1 SGSGSVGNGSSRYSPSQNSPIHHIPSR SIQHSPERSGSGSVGN PIHHIPSRRSPAKTIA R S G S R R 0 2 2 0 0 1 0 4 2 2 0 0 0 0 3 9 0 0 1 1 0 0 27 1 2751.3073 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00 Q9NYF8 272 298 BCLAF1 Bcl-2-associated transcription factor 1 yes no 4 0.0060887 41.446 By MS/MS By matching 1 1 3120500 2038000 1082400 2859 2073 3066 6469;6470 5372 5372 306;450 2975;2976;2977 1 SGSKENVQETQI IHEPLLFKSGSKENVQ ENVQETQI________ K S G Q I - 0 0 1 0 0 2 2 1 0 1 0 1 0 0 0 2 1 0 0 1 0 0 12 1 1318.6365 Q9NT99 Q9NT99 702 713 LRRC4B Leucine-rich repeat-containing protein 4B yes yes 2 1.9291E-14 136.33 By matching By MS/MS 1 1 3390800 1711500 1679300 2860 2053 3067 6471;6472 5373 5373 2929 1 SGSLDDSFSDFQELPASSK QDFQDASKSGSLDDSF QELPASSKTSNSQHGN K S G S K T 1 0 0 3 0 1 1 1 0 0 2 1 0 2 1 6 0 0 0 0 0 0 19 0 2015.896 Q9UMZ2 Q9UMZ2 467 485 SYNRG Synergin gamma yes yes 2 0.011413 51.841 By matching By MS/MS 1 1 957040 446610 510430 2861 2127 3068 6473;6474 5374 5374 3052 1 SGSLDSELSVSPK PSAPSIAKSGSLDSEL SELSVSPKRNSISRTH K S G P K R 0 0 0 1 0 0 1 1 0 0 2 1 0 0 1 5 0 0 0 1 0 0 13 0 1304.646 A0A087WTD7;A8MYJ1;Q12802 A0A087WTD7 1334 1346 AKAP13 A-kinase anchor protein 13 yes no 2 0.0084545 61.167 By MS/MS By matching 1 1 861800 370300 491500 2862 26 3069 6475;6476 5375 5375 28 1 SGSMDPSGAHPSVR RMSRSSGRSGSMDPSG SGAHPSVRQTPSRQPP R S G V R Q 1 1 0 1 0 0 0 2 1 0 0 0 1 0 2 4 0 0 0 1 0 0 14 0 1383.6201 Q07666 Q07666 18 31 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 2;3 5.0229E-14 121.18 By MS/MS By MS/MS 4 4 234620000 130000000 104620000 2863 1469 3070;3071 6477;6478;6479;6480;6481;6482;6483;6484 5376;5377;5378;5379;5380;5381;5382;5383;5384;5385 5384 200 1978;1979 9 SGSNGSVVSLEQQQK AAFQRKRRSGSNGSVV VSLEQQQKIEEQKKWL R S G Q K I 0 0 1 0 0 3 1 2 0 0 1 1 0 0 0 4 0 0 0 2 0 0 15 0 1546.7587 Q2M1P5 Q2M1P5 893 907 KIF7 Kinesin-like protein KIF7 yes yes 2 0.00011672 81.992 By MS/MS By matching 1 1 3381100 1747800 1633300 2864 1581 3072 6485;6486 5386 5386 2185 1 SGSPAPETTNESVPFAQHSSLDSR PRPASPARSGSPAPET QHSSLDSRIEMLLKEQ R S G S R I 2 1 1 1 0 1 2 1 1 0 1 0 0 1 3 6 2 0 0 1 0 0 24 0 2500.1466 O15047 O15047 468 491 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 3 0.013234 42.322 By MS/MS 1 6712500 0 6712500 2865 1101 3073 6487 5387 5387 1468;1469 1 SGSPNLPHSVSSYK PHREKYPRSGSPNLPH PHSVSSYKSREDGYYR R S G Y K S 0 0 1 0 0 0 0 1 1 0 1 1 0 0 2 5 0 0 1 1 0 0 14 0 1458.7103 Q5T481 Q5T481 740 753 RBM20 RNA-binding protein 20 yes yes 2;3 0.010317 57.328 By MS/MS By MS/MS 2 2 10219000 5348600 4870900 2866 1625 3074 6488;6489;6490;6491 5388;5389 5389 2260;2261 2 SGSPSDNSGAEEMEVSLAKPK EEEEMDFRSGSPSDNS EVSLAKPKHRVTMNEF R S G P K H 2 0 1 1 0 0 3 2 0 0 1 2 1 0 2 5 0 0 0 1 0 0 21 1 2118.9739 P31749 P31749 122 142 AKT1 RAC-alpha serine/threonine-protein kinase yes yes 3 0.018867 42.708 By MS/MS 1 1378800 0 1378800 2867 1332 3075 6492 5390 5390 1751;1752 1 SGSSPLGVVTK PGGMPGSKSGSSPLGV SPLGVVTKAASMPKNK K S G T K A 0 0 0 0 0 0 0 2 0 0 1 1 0 0 1 3 1 0 0 2 0 0 11 0 1030.5659 Q92618;A0A087WUJ4 Q92618 849 859 ZNF516 Zinc finger protein 516 yes no 2 0.0059951 69.864 By matching By MS/MS 1 1 1936300 930330 1006000 2868 1852 3076 6493;6494 5391 5391 2610 1 SGSSSPDSEITELK PRDTYSDRSGSSSPDS DSEITELKFPSINHD_ R S G L K F 0 0 0 1 0 0 2 1 0 1 1 1 0 0 1 5 1 0 0 0 0 0 14 0 1435.6678 P17812 P17812 571 584 CTPS1 CTP synthase 1 yes yes 2 0.00021061 83.087 By MS/MS By MS/MS 1 1 7021300 3346800 3674500 2869 1285 3077 6495;6496 5392;5393 5393 1685;1686 2 SGSVYEPLK SPSSAFLRSGSVYEPL GSVYEPLKSINLPRPD R S G L K S 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 2 0 0 1 1 0 0 9 0 978.50221 I3L3F2;H3BV13;H3BQ89;Q93100 I3L3F2 18 26 PHKB Phosphorylase b kinase regulatory subunit beta yes no 2 0.01048 60.828 By matching By MS/MS 1 1 1056600 572320 484280 2870 918 3078 6497;6498 5394 5394 4198 1 SGSYSYLEER RYDSLLGRSGSYSYLE SYSYLEERKPYSSRLE R S G E R K 0 1 0 0 0 0 2 1 0 0 1 0 0 0 0 3 0 0 2 0 0 0 10 0 1189.5251 O14974;A0A0U1RQZ1;H0YIM2;H0YIS3 O14974 908 917 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.0010393 93.649 By MS/MS By MS/MS 2 2 10934000 5075400 5859100 2871 1098 3079 6499;6500;6501;6502 5395;5396;5397 5396 1464;4237 3 SGTSSPQSPVFR LGLAIEPKSGTSSPQS SPQSPVFRHRTLENSP K S G F R H 0 1 0 0 0 1 0 1 0 0 0 0 0 1 2 4 1 0 0 1 0 0 12 0 1248.6099 Q8N556 Q8N556 661 672 AFAP1 Actin filament-associated protein 1 yes yes 2 0.0011287 95.417 By MS/MS By MS/MS 1 1 8870300 4331700 4538600 2872 1778 3080 6503;6504 5398;5399 5398 2499 2 SGVSLAALK AVAASKERSGVSLAAL GVSLAALKKALAAAGY R S G L K K 2 0 0 0 0 0 0 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 9 0 844.50182 P16402;P16403;P10412 P10412 55 63 HIST1H1D;HIST1H1C;HIST1H1E Histone H1.3;Histone H1.2;Histone H1.4 no no 2 0.013791 72.879 By matching By MS/MS 1 1 1386600 498650 887940 2873 1250;1277 3081 6505;6506 5400 5400 1 SGVTNMSSPHK SQTVARNRSGVTNMSS TNMSSPHKNSVPSSLN R S G H K N 0 0 1 0 0 0 0 1 1 0 0 1 1 0 1 3 1 0 0 1 0 0 11 0 1143.5343 Q9NVG8 Q9NVG8 177 187 TBC1D13 TBC1 domain family member 13 yes yes 2 0.0059826 83.226 By MS/MS By matching 1 1 1259900 996550 263380 2874 2060 3082 6507;6508 5401 5401 298 2945 1 SGYHDDSDEDLLE DTASHTNKSGYHDDSD DSDEDLLE________ K S G L E - 0 0 0 4 0 0 2 1 1 0 2 0 0 0 0 2 0 0 1 0 0 0 13 0 1493.5794 Q99523 Q99523 819 831 SORT1 Sortilin yes yes 2 0.01409 56.205 By MS/MS By MS/MS 1 1 23790000 12124000 11666000 2875 1938 3083 6509;6510 5402;5403 5403 2745 2 SGYSSPGSPGTPGSR EPPKSGDRSGYSSPGS SPGTPGSRSRTPSLPT R S G S R S 0 1 0 0 0 0 0 4 0 0 0 0 0 0 3 5 1 0 1 0 0 0 15 0 1392.627 I3L170;A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636 I3L170 126 140 MAPT Microtubule-associated protein;Microtubule-associated protein tau yes no 2 0.00011729 85.473 By MS/MS 1 4675900 0 4675900 2876 246 3084 6511 5404 5404 359 1 SHCIAEVENDEMPADLPSLAADFVESK CEKPLLEKSHCIAEVE AADFVESKDVCKNYAE K S H S K D 4 0 1 3 1 0 4 0 1 1 2 1 1 1 2 3 0 0 0 2 0 0 27 0 2973.3372 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 311 337 ALB Serum albumin yes no 3 0.0045823 43.099 By MS/MS By matching 1 1 13359000 6965600 6393100 + 2877 209 3085 6512;6513 5405 5405 30 1 SHENSNLVPK EQHHVLYKSHENSNLV ENSNLVPKDERFNKWE K S H P K D 0 0 2 0 0 0 1 0 1 0 1 1 0 0 1 2 0 0 0 1 0 0 10 0 1123.5622 D6RJB7;Q8N7Z5 D6RJB7 870 879 ANKRD31 Putative ankyrin repeat domain-containing protein 31 yes no 2 0.0065815 92.239 By MS/MS By matching 1 1 2026300 1074100 952180 2878 543 3086 6514;6515 5406 5406 83 724 1 SHGLEPAAPSPR LQLEAHLRSHGLEPAA EPAAPSPRLRPEESLD R S H P R L 2 1 0 0 0 0 1 1 1 0 1 0 0 0 3 2 0 0 0 0 0 0 12 0 1217.6153 Q9ULL5 Q9ULL5 35 46 PRR12 Proline-rich protein 12 yes yes 2 0.0098237 60.901 By MS/MS By MS/MS 1 1 5939200 3015200 2924100 2879 2121 3087 6516;6517 5407;5408 5408 3037 2 SHHAPMSPGSSGGGGQPLAR ASGGAQQRSHHAPMSP GGGQPLARTPQPSSPM R S H A R T 2 1 0 0 0 1 0 5 2 0 1 0 1 0 3 4 0 0 0 0 0 0 20 0 1886.8806 O14497 O14497 357 376 ARID1A AT-rich interactive domain-containing protein 1A yes yes 3 0.0013486 75.91 By matching By MS/MS 1 1 7871300 3956700 3914600 2880 1091 3088 6518;6519 5409 5409 1437 1 SHILEDDENSVDISMLK ASGRPRQRSHILEDDE SVDISMLKTGSSLLKE R S H L K T 0 0 1 3 0 0 2 0 1 2 2 1 1 0 0 3 0 0 0 1 0 0 17 0 1943.9146 O75717 O75717 374 390 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 2 0.012645 57.175 By MS/MS By matching 1 1 4107700 2134400 1973400 2881 1169 3089 6520;6521 5410 5410 140 1561 1 SHSFSDPSPK NNVSPVSRSHSFSDPS SFSDPSPKFAHHHLRS R S H P K F 0 0 0 1 0 0 0 0 1 0 0 1 0 1 2 4 0 0 0 0 0 0 10 0 1087.4934 H7C3Z6;H7C0P6;G5E948;A0A0D9SEY1 H7C3Z6 176 185 MAP4K4 yes no 2 0.019794 62.466 By MS/MS 1 0 0 0 2882 226 3090 6522 5411 5411 324 1 SHSKFMK MKQMEVYRSHSKFMKN RSHSKFMKNKIGQVKQ R S H M K N 0 0 0 0 0 0 0 0 1 0 0 2 1 1 0 2 0 0 0 0 0 0 7 1 863.43236 K7EPP6;A0A0U1RQM4;H7C4G9;X6RM00;G8JLD3;X6RLX0;O15083;Q8IUD2 K7EPP6 280 286 ERC1;ERC2 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 yes no 2 0.01676 57.102 By MS/MS 1 0 0 0 2883 264 3091 6523 5412 5412 41 1 SHSQASLAGPGPVDPSNR YWNGKLLRSHSQASLA GPVDPSNRSNSMLELA R S H N R S 2 1 1 1 0 1 0 2 1 0 1 0 0 0 3 4 0 0 0 1 0 0 18 0 1775.8551 A2A3M4;A6PVU7;Q9P2M7 A2A3M4 135 152 CGN Cingulin yes no 2;3 0.00047475 90.379 By MS/MS By MS/MS 2 2 8545000 4286400 4258600 2884 317 3092 6524;6525;6526;6527 5413;5414;5415 5413 453;454 3 SHSSPSQIPK LQDSEKKRSHSSPSQI SSPSQIPKKILRYVK_ R S H P K K 0 0 0 0 0 1 0 0 1 1 0 1 0 0 2 4 0 0 0 0 0 0 10 0 1066.5407 H0YN99;Q9H792 H0YN99 1033 1042 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.0021388 100.02 By MS/MS 1 543840 0 543840 2885 900 3093 6528 5416 5416 1206;1207 1 SHTPSPTSPK GQTQSPTKSHTPSPTS TPSPTSPKSYPSQKHA K S H P K S 0 0 0 0 0 0 0 0 1 0 0 1 0 0 3 3 2 0 0 0 0 0 10 0 1037.5142 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123 B7Z385 193 202 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 yes no 2 3.0127E-09 92.943 By MS/MS By matching 1 1 1656200 1376500 279690 2886 87 3094 6529;6530 5417 5417 108 0 SHVEDGDIAGAPASSPEAPPAEQDPVQLK RQQLSEMKSHVEDGDI EQDPVQLKTQLEWTEA K S H L K T 5 0 0 3 0 2 3 2 1 1 1 1 0 0 5 3 0 0 0 2 0 0 29 0 2911.3836 A0A087WU26;F8W7S5;A0A087WVV2;A0A0A0MRV0;Q9P2E9 A0A087WU26 200 228 RRBP1 Ribosome-binding protein 1 yes no 3 0.0099179 40.492 By matching By MS/MS 1 1 7071000 3278300 3792700 2887 35 3095 6531;6532 5418 5418 39;40 1 SHYADVDPENQNFLLESNLGKK PTKQAALKSHYADVDP LESNLGKKKYETEFNS K S H K K K 1 0 3 2 0 1 2 1 1 0 3 2 0 1 1 2 0 0 1 1 0 0 22 1 2517.2136 F8VUY8;Q96QD8 F8VUY8 39 60 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 3 0.00033462 77.631 By MS/MS By MS/MS 1 1 10299000 4462400 5836700 2888 742 3096 6533;6534 5419;5420;5421;5422 5422 4165 4 SIDDEDVDENEDDVYGNSSGRK GYQKLDVKSIDDEDVD YGNSSGRKHRGHSESP K S I R K H 0 1 2 6 0 0 3 2 0 1 0 1 0 0 0 3 0 0 1 2 0 0 22 1 2457.0052 Q8IUI4;Q8TEQ0 Q8IUI4 191 212 SNX29P2;SNX29 Putative protein SNX29P2;Sorting nexin-29 yes no 3 0.00034613 78.401 By MS/MS By matching 1 1 4476000 2300700 2175300 2889 1748 3097 6535;6536 5423 5423 4390 1 SIDDEITEAKSGTATPQR RTYLLDFRSIDDEITE SGTATPQRSGSVSNYR R S I Q R S 2 1 0 2 0 1 2 1 0 2 0 1 0 0 1 2 3 0 0 0 0 0 18 1 1917.928 Q13131 Q13131 476 493 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 yes yes 3 0.0054866 53.355 By matching By MS/MS 1 1 1822800 1054700 768170 2890 1491 3098 6537;6538 5424 5424 2038 1 SIEDLHR DKSKPWSRSIEDLHRG RSIEDLHRGSNLPSPV R S I H R G 0 1 0 1 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 7 0 868.44028 Q96PY5 Q96PY5 171 177 FMNL2 Formin-like protein 2 yes yes 2 0.015828 86.866 By MS/MS By matching 1 1 3460100 1678700 1781400 2891 1920 3099 6539;6540 5425 5425 2715 1 SIEEGDGAFGR GDSCFYQRSIEEGDGA EGDGAFGRSPREIQRS R S I G R S 1 1 0 1 0 0 2 3 0 1 0 0 0 1 0 1 0 0 0 0 0 0 11 0 1136.5098 O75420 O75420 137 147 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 2 0.0025396 84.188 By matching By MS/MS 1 1 3709500 1599700 2109800 2892 1162 3100 6541;6542 5426 5426 1548 1 SIFASPESVTGK NKKGQVKRSIFASPES SPESVTGKVGVGTCGI R S I G K V 1 0 0 0 0 0 1 1 0 1 0 1 0 1 1 3 1 0 0 1 0 0 12 0 1221.6241 O75940 O75940 197 208 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 2 0.0046288 70.563 By matching By MS/MS 1 1 1370700 637050 733630 2893 1171 3101 6543;6544 5427 5427 1563 1 SIGASPNPFSVHTATAVPSGK VMILKKKRSIGASPNP ATAVPSGKIASPVSRK R S I G K I 3 0 1 0 0 0 0 2 1 1 0 1 0 1 3 4 2 0 0 2 0 0 21 0 2024.0327 A0A087WU64;A6NMQ1;P09884 A0A087WU64 186 206 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit yes no 3 0.015768 43.476 By matching By MS/MS 1 1 6473000 2628100 3844900 2894 36 3102 6545;6546 5428 5428 41 1 SIGSAVDQGNESIVAK PGPVKKTRSIGSAVDQ GNESIVAKTTVTVPND R S I A K T 2 0 1 1 0 1 1 2 0 2 0 1 0 0 0 3 0 0 0 2 0 0 16 0 1573.7948 F8W1E5;F8VRD2;Q9H0H5 F8W1E5 129 144 RACGAP1 Rac GTPase-activating protein 1 yes no 2 1.4718E-85 170.35 By MS/MS By MS/MS 1 1 23194000 9268500 13926000 2895 735 3103 6547;6548 5429;5430 5430 981 2 SIGVSNFNCRQLEMILNKPGLK CKDAGLAKSIGVSNFN ILNKPGLKYKPVCNQV K S I L K Y 0 1 3 0 1 1 1 2 0 2 3 2 1 1 1 2 0 0 0 1 0 0 22 2 2517.3196 P17516 P17516 162 183 AKR1C4 Aldo-keto reductase family 1 member C4 yes yes 3 0.0096832 44.788 By MS/MS By matching 1 1 26652000 12127000 14524000 2896 1284 3104 6549;6550 5431 5431 179 1683;1684 1 SIKSDVPVYLK ERTEEDSKSIKSDVPV SDVPVYLKRLKGNKHD K S I L K R 0 0 0 1 0 0 0 0 0 1 1 2 0 0 1 2 0 0 1 2 0 0 11 1 1247.7125 H0Y2V6;Q5SW79 H0Y2V6 258 268 CEP170 Centrosomal protein of 170 kDa yes no 2 0.015397 69.352 By matching By MS/MS 1 1 1360200 637030 723200 2897 815 3105 6551;6552 5432 5432 1094 1 SILAKPSSSPDPR LTSVMVPKSILAKPSS PSSSPDPRYLSVPPSP K S I P R Y 1 1 0 1 0 0 0 0 0 1 1 1 0 0 3 4 0 0 0 0 0 0 13 1 1353.7252 Q9BTC0 Q9BTC0 1011 1023 DIDO1 Death-inducer obliterator 1 yes yes 2;3 0.001451 93.243 By MS/MS By MS/MS 2 2 8743900 4313400 4430500 2898 1959 3106 6553;6554;6555;6556 5433;5434;5435 5434 2774;2775;2776 3 SILPYPVSPK GRTKSSYKSILPYPVS LPYPVSPKQKYSHVIL K S I P K Q 0 0 0 0 0 0 0 0 0 1 1 1 0 0 3 2 0 0 1 1 0 0 10 0 1099.6277 H3BP52;H3BTF4;Q8IWI9 H3BP52 917 926 MGA MAX gene-associated protein yes no 2 0.0021867 96.82 By MS/MS By MS/MS 1 1 2507800 1384300 1123600 2899 915 3107 6557;6558 5436;5437;5438;5439;5440;5441 5436 1226 6 SILSPGGSCGPIK VMVTDADRSILSPGGS GGSCGPIKVKTEPTED R S I I K V 0 0 0 0 1 0 0 3 0 2 1 1 0 0 2 3 0 0 0 0 0 0 13 0 1271.6544 P78347 P78347 207 219 GTF2I General transcription factor II-I yes yes 2 0.0043383 69.345 By matching By MS/MS 1 1 28410000 13121000 15289000 2900 1442 3108 6559;6560 5442;5443;5444 5443 1921 3 SILSPGGSCGPIKVK VMVTDADRSILSPGGS SCGPIKVKTEPTEDSG R S I V K T 0 0 0 0 1 0 0 3 0 2 1 2 0 0 2 3 0 0 0 1 0 0 15 1 1498.8177 P78347 P78347 207 221 GTF2I General transcription factor II-I yes yes 2 0.0063878 64.313 By MS/MS 1 0 0 0 2901 1442 3109 6561 5445 5445 1921 1 SILVSPTGPSR AEFKKTDKSILVSPTG VSPTGPSRVAFDPEQK K S I S R V 0 1 0 0 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1112.619 Q14684 Q14684 702 712 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.0016267 96.059 By MS/MS By MS/MS 1 1 24280000 12512000 11768000 2902 1526 3110 6562;6563 5446;5447 5446 2098 2 SINKLDSPDPFK CPLPPGKRSINKLDSP LDSPDPFKLNDPFQPF R S I F K L 0 0 1 2 0 0 0 0 0 1 1 2 0 1 2 2 0 0 0 0 0 0 12 1 1359.7034 B1AUU8;P42566 B1AUU8 656 667 EPS15 Epidermal growth factor receptor substrate 15 yes no 2 0.015333 67.275 By matching By MS/MS 1 1 937950 344270 593680 2903 363 3111 6564;6565 5448 5448 528 1 SIPLECPLSSPK ALTGGEAKSIPLECPL ECPLSSPKGVLFSSKS K S I P K G 0 0 0 0 1 0 1 0 0 1 2 1 0 0 3 3 0 0 0 0 0 0 12 0 1326.6853 Q92667;I3L2A2;I3L2N7 Q92667 142 153 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.0008223 97.463 By MS/MS By MS/MS 1 1 29154000 14831000 14323000 2904 1857 3112 6566;6567 5449;5450 5450 2622 2 SIQADGLVWGSSK AKLEECVRSIQADGLV GLVWGSSKLVPVGYGI R S I S K L 1 0 0 1 0 1 0 2 0 1 1 1 0 0 0 3 0 1 0 1 0 0 13 0 1346.683 P24534 P24534 164 176 EEF1B2 Elongation factor 1-beta yes yes 2 0.005111 67.964 By MS/MS 1 335270 0 335270 2905 1309 3113 6568 5451 5451 1721;1722 1 SIQDLTVTGTEPGQVSSR GNGQPRRRSIQDLTVT EPGQVSSRSSSPSVRM R S I S R S 0 1 0 1 0 2 1 2 0 1 1 0 0 0 1 3 3 0 0 2 0 0 18 0 1873.9381 Q9UG54;O43318 Q9UG54 93 110 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 2 1.3934E-33 131.37 By MS/MS By MS/MS 1 1 25695000 12823000 12872000 2906 1120 3114 6569;6570 5452;5453 5452 1492 2 SIQFVDWCPTGFK IATIKTKRSIQFVDWC DWCPTGFKVGINYQPP R S I F K V 0 0 0 1 1 1 0 1 0 1 0 1 0 2 1 1 1 1 0 1 0 0 13 0 1583.7442 P68363;P68366 P68363 340 352 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain yes no 2 0.015513 58.223 By MS/MS 1 689130 689130 0 2907 1439 3115 6571 5454;5455 5455 2 SISADDDLQESSR PTFQPFQRSISADDDL DDLQESSRRPQRKSLY R S I S R R 1 1 0 3 0 1 1 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0 13 0 1421.627 P18615;A0A0A0MT02;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 113 125 NELFE Negative elongation factor E yes no 2 7.1346E-40 157.33 By MS/MS By MS/MS 1 2 98536000 45289000 53246000 2908 1289 3116 6572;6573;6574 5456;5457 5456 1694 2 SISADSFDQR KGKGKRERSISADSFD SADSFDQRDPGTPNDD R S I Q R D 1 1 0 2 0 1 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 10 0 1124.5098 O00512 O00512 102 111 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 0.0019759 101.71 By MS/MS By MS/MS 1 1 2230300 1025900 1204300 2909 1087 3117 6575;6576 5458;5459 5459 1428 2 SISASKASPPGDLQNPK TQSLHSLRSISASKAS PGDLQNPKRARQDPT_ R S I P K R 2 0 1 1 0 1 0 1 0 1 1 2 0 0 3 4 0 0 0 0 0 0 17 1 1695.8792 O00273 O00273 308 324 DFFA DNA fragmentation factor subunit alpha yes yes 2 6.5424E-15 113.86 By MS/MS By MS/MS 1 1 14003000 7498100 6504900 2910 1082 3118 6577;6578 5460;5461;5462 5462 1424 3 SISCEEATCSDTSESILEEEPQENQKK DDRRGVLRSISCEEAT EPQENQKKLLPLSVTP R S I K K L 1 0 1 1 2 2 7 0 0 2 1 2 0 0 1 5 2 0 0 0 0 0 27 1 3127.3445 I3L280;O94763 I3L280 187 213 URI1 Unconventional prefoldin RPB5 interactor 1 yes no 3 0.0031707 46.878 By MS/MS 1 5438000 5438000 0 2911 984 3119 6579 5463 5463 1321 1 SISGTPAETPACK AAQSGLTRSISGTPAE PAETPACKSASETKVI R S I C K S 2 0 0 0 1 0 1 1 0 1 0 1 0 0 2 2 2 0 0 0 0 0 13 0 1317.6235 F8VWT9;J3KPF0;Q9Y4D8 F8VWT9 1361 1373 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes no 2 0.00062948 77.894 By MS/MS By matching 1 1 3417300 1793500 1623800 2912 745 3120 6580;6581 5464 5464 988 1 SISNEGLTLNNSHVSK TPNRGITRSISNEGLT LNNSHVSKHIRKNLSF R S I S K H 0 0 3 0 0 0 1 1 1 1 2 1 0 0 0 4 1 0 0 1 0 0 16 0 1698.8537 Q08AD1 Q08AD1 462 477 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2;3 1.4957E-58 157.7 By MS/MS By MS/MS 2 2 39087000 18839000 20248000 2913 1472 3121 6582;6583;6584;6585 5465;5466;5467;5468 5466 1986;1987 4 SISTSGPLDKEDTGR CPIFPMARSISTSGPL LDKEDTGRQKLISTGS R S I G R Q 0 1 0 2 0 0 1 2 0 1 1 1 0 0 1 3 2 0 0 0 0 0 15 1 1561.7584 A0A0U1RR27;Q7Z401 A0A0U1RR27 1631 1645 DENND4A C-myc promoter-binding protein yes no 2 0.016936 58.658 By MS/MS By MS/MS 1 1 7043200 3578600 3464600 2914 270 3122 6586;6587 5469;5470 5470 385 2 SITLFVQEDR LLATGQWKSITLFVQE TLFVQEDRAQLYIDCE K S I D R A 0 1 0 1 0 1 1 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1206.6245 CON__Q28194;P07996 CON__Q28194 155 164 THBS1 Thrombospondin-1 yes no 2 0.0046633 84.615 By MS/MS By MS/MS 1 1 1780700 1027700 753030 + 2915 508 3123 6588;6589 5471;5472 5471 2 SITSPTTLYDR ADTGGLGRSITSPTTL SPTTLYDRYSSPPAST R S I D R Y 0 1 0 1 0 0 0 0 0 1 1 0 0 0 1 2 3 0 1 0 0 0 11 0 1252.6299 F5H837;Q08999 F5H837 585 595 RBL2 Retinoblastoma-like protein 2 yes no 2 0.0070366 67.275 By matching By MS/MS 1 1 3224600 1648700 1575900 2916 724 3124 6590;6591 5473 5473 963 1 SIVAVEPR PRRRGRKKSIVAVEPR SIVAVEPRSLIQGAFQ K S I P R S 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 2 0 0 8 0 869.49707 Q5VZL5;H7C1I7 Q5VZL5 1181 1188 ZMYM4 Zinc finger MYM-type protein 4 no no 2 0.01063 84.817 By MS/MS By MS/MS 1 1 8300900 3544500 4756500 2917 1658;956 3125 6592;6593 5474;5475 5475 1284 2 SIVPSSPQPQR SSLCRSRRSIVPSSPQ PSSPQPQRAQLAPHAP R S I Q R A 0 1 0 0 0 2 0 0 0 1 0 0 0 0 3 3 0 0 0 1 0 0 11 0 1194.6357 H7C5C6;H7C5K2;H7C5A5;H0Y860;Q9P246 H7C5C6 120 130 STIM2 Stromal interaction molecule 2 yes no 2 0.0090443 63.473 By matching By MS/MS 1 1 3652700 1783700 1869000 2918 847 3126 6594;6595 5476 5476 1141 1 SIYGEKFDDENLIR RHNGTGDKSIYGEKFD FDDENLIRKHTGSGIL K S I I R K 0 1 1 2 0 0 2 1 0 2 1 1 0 1 0 1 0 0 1 0 0 0 14 1 1697.8261 Q9Y536;P0DN37;P0DN26;A0A0H2UH34;A0A0B4J2A2;A0A075B767;A0A075B759;F5H284 Q9Y536 77 90 PPIAL4A;PPIAL4C;PPIAL4E;PPIAL4D Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4D yes no 2 0.010942 58.592 By MS/MS 1 3498100 3498100 0 2919 2164 3127 6596 5477 5477 4468 1 SKEIENGHIFTVNDQFTSK RVLTKEPKSKEIENGH VNDQFTSKLHRVKIQT K S K S K L 0 0 2 1 0 1 2 1 1 2 0 2 0 2 0 2 2 0 0 1 0 0 19 1 2193.0702 A0A087WTG3;Q13618 A0A087WTG3 224 242 CUL3 Cullin-3 yes no 3 0.017812 41.348 By MS/MS By matching 1 1 1522600 739630 783000 2920 27 3128 6597;6598 5478 5478 6;7 29;3214 1 SKESVPEFPLSPPK FELILSPRSKESVPEF EFPLSPPKKKDLSLEE R S K P K K 0 0 0 0 0 0 2 0 0 0 1 2 0 1 4 3 0 0 0 1 0 0 14 1 1540.8137 A2A2D0;P16949 A2A2D0 28 41 STMN1 Stathmin yes no 2;3 2.6938E-13 120.32 By MS/MS By MS/MS 2 2 19738000 9379600 10358000 2921 312 3129 6599;6600;6601;6602 5479;5480;5481;5482;5483;5484;5485 5484 448 7 SKFDSDEEEEDTENVEAASSGK DGPRLPQRSKFDSDEE VEAASSGKVTRSPSPV R S K G K V 2 0 1 3 0 0 6 1 0 0 0 2 0 1 0 4 1 0 0 1 0 0 22 1 2401.9881 Q8TF01 Q8TF01 286 307 PNISR Arginine/serine-rich protein PNISR yes yes 2;3 0.00095755 72.797 By matching By MS/MS 2 2 35959000 14842000 21117000 2922 1828 3130 6603;6604;6605;6606 5486;5487;5488 5487 2576 3 SKPIPIMPASPQK EELLAEEKSKPIPIMP IMPASPQKGHAVNLLD K S K Q K G 1 0 0 0 0 1 0 0 0 2 0 2 1 0 4 2 0 0 0 0 0 0 13 1 1392.7799 G8JLD5;O00429 G8JLD5 583 595 DNM1L Dynamin-1-like protein yes no 2;3 2.6293E-05 106.3 By MS/MS By MS/MS 3 3 14501000 5862700 8637900 2923 813 3131;3132 6607;6608;6609;6610;6611;6612 5489;5490;5491;5492;5493 5490 99 1084 4 SKSDATASISLSSNLK PSKRTHQRSKSDATAS ISLSSNLKRTASNPKV R S K L K R 2 0 1 1 0 0 0 0 0 1 2 2 0 0 0 6 1 0 0 0 0 0 16 1 1607.8366 A0A0B4J1S8;Q9UBF8 A0A0B4J1S8 287 302 PI4KB Phosphatidylinositol 4-kinase beta yes no 2 0.0021022 83.37 By matching By MS/MS 1 1 3453200 1749100 1704100 2924 192 3133 6613;6614 5494 5494 275 1 SKSDATASISLSSNLKR PSKRTHQRSKSDATAS SLSSNLKRTASNPKVE R S K K R T 2 1 1 1 0 0 0 0 0 1 2 2 0 0 0 6 1 0 0 0 0 0 17 2 1763.9377 A0A0B4J1S8;Q9UBF8 A0A0B4J1S8 287 303 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 0.015252 52.93 By MS/MS By matching 1 1 3155600 1513200 1642400 2925 192 3134 6615;6616 5495 5495 275 1 SKSDGEAKPEPSPSPR SKPRTPRRSKSDGEAK PEPSPSPRITRKSTRQ R S K P R I 1 1 0 1 0 0 2 1 0 0 0 2 0 0 4 4 0 0 0 0 0 0 16 2 1667.8115 P26358;K7ERQ1;K7ENQ6;K7EJL0 P26358 141 156 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes no 3 0.021442 51.466 By matching By MS/MS 1 1 10493000 5712600 4780500 2926 1314 3135 6617;6618 5496 5496 1731 1 SKSDSYTLDPDTLR KLDPPRERSKSDSYTL TLDPDTLRKKKMPLTE R S K L R K 0 1 0 3 0 0 0 0 0 0 2 1 0 0 1 3 2 0 1 0 0 0 14 1 1596.7631 O75592 O75592 2831 2844 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2;3 0.0030506 73.435 By matching By MS/MS 2 2 8925800 4733800 4192000 2927 1167 3136 6619;6620;6621;6622 5497;5498 5498 1559 2 SKSEDMDNVQSK NEFSRRKRSKSEDMDN DMDNVQSKRRRYMEEE R S K S K R 0 0 1 2 0 1 1 0 0 0 0 2 1 0 0 3 0 0 0 1 0 0 12 1 1366.6035 Q6VMQ6 Q6VMQ6 557 568 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 2 5.0985E-11 132.51 By MS/MS 2 1900700 1900700 0 2928 1693 3137 6623;6624 5499;5500 5500 2368 2 SKSEEAHAEDSVMDHHFR KKGFVLHKSKSEEAHA SVMDHHFRKPANDITS K S K F R K 2 1 0 2 0 0 3 0 3 0 0 1 1 1 0 3 0 0 0 1 0 0 18 1 2110.9127 Q8NC51 Q8NC51 328 345 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3;4;5 0.00068908 80.994 By MS/MS By MS/MS 6 6 516390000 245700000 270680000 2929 1791 3138;3139 6625;6626;6627;6628;6629;6630;6631;6632;6633;6634;6635;6636 5501;5502;5503;5504;5505;5506;5507;5508;5509;5510 5510 259 2512;2513 10 SKSEMSYIDGEK ________________ MSYIDGEKVVKRSATL R S K E K V 0 0 0 1 0 0 2 1 0 1 0 2 1 0 0 3 0 0 1 0 0 0 12 1 1372.618 A0A0U1RQI5;Q9BX66 A0A0U1RQI5 8 19 SORBS1 Sorbin and SH3 domain-containing protein 1 yes no 2 0.01861 64.104 By MS/MS By matching 1 1 1016100 386690 629400 2930 262 3140 6637;6638 5511 5511 377 1 SKSERPPTILMTEEPSSPK FLNLIKSRSKSERPPT TEEPSSPKGAVRSPPV R S K P K G 0 1 0 0 0 0 3 0 0 1 1 2 1 0 4 4 2 0 0 0 0 0 19 2 2113.0725 Q5VZK9;A0A0U1RQQ1 Q5VZK9 1078 1096 LRRC16A Leucine-rich repeat-containing protein 16A yes no 3 0.021265 48.907 By MS/MS 1 999360 999360 0 2931 1657 3141 6639 5512 5512 2314;2315 1 SKSETGDSSIFR REKPLKRRSKSETGDS TGDSSIFRKLRNAKGE R S K F R K 0 1 0 1 0 0 1 1 0 1 0 1 0 1 0 4 1 0 0 0 0 0 12 1 1312.6259 O43166 O43166 286 297 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes yes 2 0.011515 70.622 By matching By MS/MS 1 1 3350300 1582400 1767800 2932 1114 3142 6640;6641 5513 5513 1483 1 SKSFLGLSGNQSAGTR KRKNSAVKSKSFLGLS GNQSAGTRVGTPGMIV K S K T R V 1 1 1 0 0 1 0 3 0 0 2 1 0 1 0 4 1 0 0 0 0 0 16 1 1608.822 Q8TAL5 Q8TAL5 163 178 C9orf43 Uncharacterized protein C9orf43 yes yes 2 0.021142 40.767 By MS/MS 1 0 0 0 2933 1812 3143 6642 5514 5514 254 2554;3861 1 SKSQNILSTEEER LEYSRRKRSKSQNILS ILSTEEERTTLLPNET R S K E R T 0 1 1 0 0 1 3 0 0 1 1 1 0 0 0 3 1 0 0 0 0 0 13 1 1519.7478 Q6NT16 Q6NT16 436 448 SLC18B1 MFS-type transporter SLC18B1 yes yes 2 0.017629 63.32 By matching By MS/MS 1 1 1291900 565260 726650 2934 1672 3144 6643;6644 5515 5515 2339 1 SKSTSSER KYLAMKTKSKSTSSER SKSTSSERYKGQAPDL K S K E R Y 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 4 1 0 0 0 0 0 8 1 880.42502 Q15751 Q15751 3050 3057 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes yes 1 0.012025 51.346 By matching By MS/MS 1 1 18682000 7699800 10983000 2935 1567 3145 6645;6646 5516 5516 2165;3770 1 SKSVIEQVSWDT TRQLRNIRSKSVIEQV IEQVSWDT________ R S K D T - 0 0 0 1 0 1 1 0 0 1 0 1 0 0 0 3 1 1 0 2 0 0 12 1 1377.6776 H0Y7E2;Q6WCQ1 H0Y7E2 1080 1091 MPRIP Myosin phosphatase Rho-interacting protein yes no 2 0.0034338 87.831 By MS/MS By MS/MS 1 1 2606600 1480200 1126400 2936 844 3146 6647;6648 5517;5518 5517 1137;1138 2 SKSVKEDSNLTLQEK KTPDKMKKSKSVKEDS SNLTLQEKKEKIQTGL K S K E K K 0 0 1 1 0 1 2 0 0 0 2 3 0 0 0 3 1 0 0 1 0 0 15 2 1704.8894 P46940;H0YLE8 P46940 1441 1455 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 3 2.3994E-07 105.01 By MS/MS By MS/MS 1 1 10056000 4807400 5248800 2937 1370 3147 6649;6650 5519;5520 5519 1816 2 SKSYDEGLDDYREDAK QPNSKTERSKSYDEGL DDYREDAKLSFKHVSS R S K A K L 1 1 0 4 0 0 2 1 0 0 1 2 0 0 0 2 0 0 2 0 0 0 16 2 1889.8279 Q5T5U3;E7ESW5;F8W9U9;A0A1B0GV73 Q5T5U3 878 893 ARHGAP21 Rho GTPase-activating protein 21 yes no 3 1.4118E-08 101.49 By MS/MS By matching 1 1 3975200 2018200 1956900 2938 1626 3148 6651;6652 5521 5521 2263 1 SKTQLSPSIK TTRSEAQRSKTQLSPS TQLSPSIKRKREVSPP R S K I K R 0 0 0 0 0 1 0 0 0 1 1 2 0 0 1 3 1 0 0 0 0 0 10 1 1087.6237 Q8NFC6;H0Y9Y2 Q8NFC6 3014 3023 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 2 0.0055517 94.402 By MS/MS By matching 1 1 1716300 875380 840910 2939 1803 3149 6653;6654 5522 5522 2537 1 SKVGSTENIK APDLKNVRSKVGSTEN VGSTENIKHQPGGGRA R S K I K H 0 0 1 0 0 0 1 1 0 1 0 2 0 0 0 2 1 0 0 1 0 0 10 1 1061.5717 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4 E7EVA0 2082 2091 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 2.0092E-14 146.5 By MS/MS By MS/MS 1 1 15025000 6454300 8570900 2940 596 3150 6655;6656 5523;5524;5525 5525 817;3426 3 SKWPWQVSLR VGGQEAPRSKWPWQVS WPWQVSLRVRGPYWMH R S K L R V 0 1 0 0 0 1 0 0 0 0 1 1 0 0 1 2 0 2 0 1 0 0 10 1 1285.6931 A0A0C4DFZ7;J3QTS8;A0A087WUI4;A0A087X1U0;Q9BZJ3;Q15661;P20231 A0A0C4DFZ7 40 49 TPSD1;TPSAB1;TPSB2 Tryptase delta;Tryptase alpha/beta-1;Tryptase beta-2 yes no 3 0.016119 44.132 By MS/MS 1 0 0 0 2941 41 3151 6657 5526 5526 49;50 1 SLAADDEGGPELEPDYGTATR YGLEDDTRSLAADDEG PDYGTATRRRPECGRG R S L T R R 3 1 0 3 0 0 3 3 0 0 2 0 0 0 2 1 2 0 1 0 0 0 21 0 2162.9604 C9JJX6;E9PDC3;O00192 C9JJX6 204 224 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 2 0.0013766 80.746 By MS/MS 1 1572500 0 1572500 2942 467 3152 6658 5527;5528 5528 4110 2 SLAALDALNTDDENDEEEYEAWK KELEENKRSLAALDAL EEEYEAWKVRELKRIK R S L W K V 4 0 2 4 0 0 5 0 0 0 3 1 0 0 0 1 1 1 1 0 0 0 23 0 2640.1351 P55081 P55081 258 280 MFAP1 Microfibrillar-associated protein 1 yes yes 2 0.0138 56.527 By MS/MS 1 2453200 0 2453200 2943 1413 3153 6659 5529 5529 3715 1 SLALMYESEK ATAASTSRSLALMYES ALMYESEKVGVASSEE R S L E K V 1 0 0 0 0 0 2 0 0 0 2 1 1 0 0 2 0 0 1 0 0 0 10 0 1169.5638 O95721 O95721 63 72 SNAP29 Synaptosomal-associated protein 29 yes yes 2 0.010079 56.563 By MS/MS By MS/MS 1 1 855530 365050 490480 2944 1198 3154 6660;6661 5530;5531 5530 1602;4255 2 SLAPDRSDDEHDPLDNTSRPR SSPTSYWKSLAPDRSD LDNTSRPRYSHSYLSD K S L P R Y 1 3 1 5 0 0 1 0 1 0 2 0 0 0 3 3 1 0 0 0 0 0 21 2 2392.1003 A0A0D9SFK2;Q92614 A0A0D9SFK2 1998 2018 MYO18A Unconventional myosin-XVIIIa yes no 4 0.011764 50.432 By MS/MS By matching 1 1 7632000 4445400 3186700 2945 234 3155 6662;6663 5532 5532 342 1 SLATMDSPPHQK KASQSRKRSLATMDSP MDSPPHQKQPQRGEVS R S L Q K Q 1 0 0 1 0 1 0 0 1 0 1 1 1 0 2 2 1 0 0 0 0 0 12 0 1310.6289 Q14676 Q14676 1814 1825 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 0.0041389 69.216 By MS/MS 1 721830 0 721830 2946 1523 3156 6664 5533 5533 216 3752 1 SLDDKPYK SSFSRLRRSLDDKPYK SLDDKPYKCTECEKSF R S L Y K C 0 0 0 2 0 0 0 0 0 0 1 2 0 0 1 1 0 0 1 0 0 0 8 1 964.48656 P17026 P17026 49 56 ZNF22 Zinc finger protein 22 yes yes 2 0.016632 101.97 By MS/MS By matching 1 1 3569200 1632700 1936500 2947 1279 3157 6665;6666 5534 5534 1678 1 SLDGASVNENHEIYMK ________________ ENHEIYMKDSMSAAEV R S L M K D 1 0 2 1 0 0 2 1 1 1 1 1 1 0 0 2 0 0 1 1 0 0 16 0 1805.8254 A0A0J9YW26;A0A1B0GTF8;A8K968;A0A0A0MRA8;A0A0A0MSA4;J3KT37 A0A0J9YW26 7 22 EPB41L3 yes no 2;3 0.00046146 70.98 By MS/MS By MS/MS 2 2 4604700 2218900 2385800 2948 134 3158 6667;6668;6669;6670 5535;5536;5537 5536 4024 3 SLDNNYSTPNER SNMGSNTKSLDNNYST NYSTPNERGDHNRTLD K S L E R G 0 1 3 1 0 0 1 0 0 0 1 0 0 0 1 2 1 0 1 0 0 0 12 0 1408.6219 C9JZR2;O60716;H0YC95 C9JZR2 899 910 CTNND1 Catenin delta-1 yes no 2 6.8145E-09 118.48 By MS/MS By MS/MS 1 1 29288000 15063000 14225000 2949 495 3159 6671;6672 5538;5539;5540 5540 4123 3 SLDNNYSTPNERGDHNR SNMGSNTKSLDNNYST NERGDHNRTLDRSGDL K S L N R T 0 2 4 2 0 0 1 1 1 0 1 0 0 0 1 2 1 0 1 0 0 0 17 1 1987.8732 C9JZR2;O60716;H0YC95 C9JZR2 899 915 CTNND1 Catenin delta-1 yes no 3 0.0029035 60.474 By MS/MS By MS/MS 1 1 10467000 5333200 5133600 2950 495 3160 6673;6674 5541;5542 5541 4123 2 SLDPSQTDFYGEYVMQENCGIVVSLRFPIPK CFSQEEWRSLDPSQTD SLRFPIPKLDMLSQLE R S L P K L 0 1 1 2 1 2 2 2 0 2 2 1 1 2 3 3 1 0 2 3 0 0 31 1 3588.7269 Q96N77 Q96N77 125 155 ZNF641 Zinc finger protein 641 yes yes 3 0.0083512 40.819 By MS/MS 1 6427400 6427400 0 2951 1912 3161 6675 5543 5543 267 1 SLDSYPVSKNDGTR QADLALRRSLDSYPVS VSKNDGTRPKMTPEQM R S L T R P 0 1 1 2 0 0 0 1 0 0 1 1 0 0 1 3 1 0 1 1 0 0 14 1 1537.7372 Q9UM54 Q9UM54 1037 1050 MYO6 Unconventional myosin-VI yes yes 2 0.014444 42.743 By MS/MS By matching 1 1 1111900 535440 576420 2952 2125 3162 6676;6677 5544 5544 322 3048;3049;3961;4463 1 SLEDLQLTHNK ESVGPLPKSLEDLQLT DLQLTHNKITKLGSFE K S L N K I 0 0 1 1 0 1 1 0 1 0 3 1 0 0 0 1 1 0 0 0 0 0 11 0 1296.6674 P51884 P51884 138 148 LUM Lumican yes yes 2;3 0.0048123 83.883 By MS/MS 2 765510 765510 0 2953 1397 3163 6678;6679 5545;5546 5545 2 SLEDPYSQQIR PRTTIFVKSLEDPYSQ DPYSQQIRLQQQQAQQ K S L I R L 0 1 0 1 0 2 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 0 11 0 1334.6466 A0A087WXK3;Q9NVH2 A0A087WXK3 120 130 INTS7 Integrator complex subunit 7 yes no 2 0.00087602 93.178 By MS/MS By MS/MS 1 1 1440300 622380 817910 2954 73 3164 6680;6681 5547;5548 5548 4010 2 SLEGGGCPAR EEGKRSRRSLEGGGCP EGGGCPARAPEPGPTG R S L A R A 1 1 0 0 1 0 1 3 0 0 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1002.4553 Q9Y613 Q9Y613 367 376 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.00081324 107.45 By MS/MS By MS/MS 3 2 2301500 1232800 1068600 2955 2174 3165 6682;6683;6684;6685;6686 5549;5550;5551 5551 3158 3 SLELNGAVEPSEGAPR RVRSLLGRSLELNGAV EPSEGAPRA_______ R S L P R A 2 1 1 0 0 0 3 2 0 0 2 0 0 0 2 2 0 0 0 1 0 0 16 0 1624.8057 M0R2A7;M0QYS2;M0R0P4;R4GN16;F5GYK2;Q9NRL3 M0R2A7 87 102 STRN4 Striatin-4 yes no 2 0.013689 52.254 By MS/MS 1 608070 608070 0 2956 702 3166 6687 5552 5552 938 1 SLEVIPEKANDETGE ADVQKPRRSLEVIPEK KANDETGE________ R S L G E - 1 0 1 1 0 0 4 1 0 1 1 1 0 0 1 1 1 0 0 1 0 0 15 1 1629.7734 Q9UPR0 Q9UPR0 1113 1127 PLCL2 Inactive phospholipase C-like protein 2 yes yes 2 1.2962E-10 113.53 By MS/MS By MS/MS 1 1 5620700 2919700 2701100 2957 2130 3167 6688;6689 5553;5554 5553 3058 2 SLEYLDLSFNQIAR SAAFKGLKSLEYLDLS LSFNQIARLPSGLPVS K S L A R L 1 1 1 1 0 1 1 0 0 1 3 0 0 1 0 2 0 0 1 0 0 0 14 0 1667.8519 P51884 P51884 185 198 LUM Lumican yes yes 2;3 2.7689E-278 279.62 By MS/MS By MS/MS 2 2 150350000 87083000 63266000 2958 1397 3168 6690;6691;6692;6693 5555;5556;5557;5558 5555 4 SLGGAVGSVASGAR APAAPRSRSLGGAVGS GSVASGARAAQSPFSI R S L A R A 3 1 0 0 0 0 0 4 0 0 1 0 0 0 0 3 0 0 0 2 0 0 14 0 1187.6258 Q8NHG8 Q8NHG8 82 95 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 yes yes 2 0.00026156 84.62 By MS/MS By MS/MS 1 1 5365800 2653000 2712800 2959 1807 3169 6694;6695 5559;5560;5561 5561 2547 3 SLGGESSGGTTPVGSFHTEAAR LAHRELLKSLGGESSG SFHTEAARWTDGSLSP K S L A R W 2 1 0 0 0 0 2 5 1 0 1 0 0 1 1 4 3 0 0 1 0 0 22 0 2103.9821 O15085 O15085 1452 1473 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 3 0.021828 42.711 By MS/MS By matching 1 1 1961600 1172200 789420 2960 1103 3170 6696;6697 5562 5562 1471;1472;3599 1 SLGKDGSLEDDEDEEDDLDEGVGGK MVENEVIKSLGKDGSL LDEGVGGKRRSMEVKP K S L G K R 0 0 0 7 0 0 5 5 0 0 3 2 0 0 0 2 0 0 0 1 0 0 25 1 2622.094 Q12789 Q12789 1605 1629 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.0015909 56.625 By MS/MS By MS/MS 1 1 11969000 6213100 5756200 2961 1477 3171 6698;6699 5563;5564 5564 1999 2 SLGNILQAKPTSSPAK AVAPAQEKSLGNILQA KPTSSPAKGPPQKAGP K S L A K G 2 0 1 0 0 1 0 1 0 1 2 2 0 0 2 3 1 0 0 0 0 0 16 1 1610.8992 J3KQ96;E7ETY2;Q13428 J3KQ96 571 586 TCOF1 Treacle protein yes no 2;3 0.0040629 82.259 By MS/MS By MS/MS 2 2 38530000 16180000 22350000 2962 591 3172 6700;6701;6702;6703 5565;5566;5567 5567 799;800;3422 3 SLGPSLATDKS PQNAIRQRSLGPSLAT PSLATDKS________ R S L K S - 1 0 0 1 0 0 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 11 1 1074.5557 Q9H3N1 Q9H3N1 270 280 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.003661 93.766 By matching By MS/MS 1 1 103720000 46629000 57092000 2963 2002 3173 6704;6705 5568 5568 2866 1 SLGYHGSSYSPEGVEPVSPVSSPSLTHDK SIQELELRSLGYHGSS SPSLTHDKGLPKHLEE R S L D K G 0 0 0 1 0 0 2 3 2 0 2 1 0 0 4 8 1 0 2 3 0 0 29 0 2999.4149 C9J7T7;C9JE98;C9J0Q5;C9JFD3;Q9Y618 C9J7T7 1585 1613 NCOR2 Nuclear receptor corepressor 2 yes no 3 0.0047671 40.685 By MS/MS By matching 1 1 2943700 1702700 1241000 2964 433 3174 6706;6707 5569 5569 624;3361;4101 1 SLIGSPGR GSKKHDVRSLIGSPGR SLIGSPGRTFPPVHPL R S L G R T 0 1 0 0 0 0 0 2 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 0 785.43955 C9J7T7;C9JE98;C9J0Q5;C9JFD3;Q9Y618 C9J7T7 1023 1030 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.012667 82.671 By matching By MS/MS 1 1 2576800 1332500 1244300 2965 433 3175 6708;6709 5570 5570 625 1 SLKESEQESEEEILAQKK VEGNKGTKSLKESEQE EEILAQKKEQREEEVE K S L K K E 1 0 0 0 0 2 6 0 0 1 2 3 0 0 0 3 0 0 0 0 0 0 18 2 2104.0536 Q9BW71 Q9BW71 219 236 HIRIP3 HIRA-interacting protein 3 yes yes 3 0.0065685 62.823 By MS/MS By MS/MS 1 1 41082000 19149000 21933000 2966 1967 3176 6710;6711 5571;5572 5572 2784;2785 2 SLLGIDTEDAIQGR QGLDLSSRSLLGIDTE TEDAIQGRNESCDISK R S L G R N 1 1 0 2 0 1 1 2 0 2 2 0 0 0 0 1 1 0 0 0 0 0 14 0 1486.7627 P49454 P49454 1750 1763 CENPF Centromere protein F yes yes 2 0.017141 53.001 By matching By MS/MS 1 1 518870 232050 286820 2967 1379 3177 6712;6713 5573 5573 1841 1 SLLSQMLHYDPNK PPLDEDGRSLLSQMLH MLHYDPNKRISAKAAL R S L N K R 0 0 1 1 0 1 0 0 1 0 3 1 1 0 1 2 0 0 1 0 0 0 13 0 1544.7657 E7ESI2;G3V5T9;P24941 E7ESI2 201 213 CDK2 Cyclin-dependent kinase 2 yes no 2 0.018977 43.761 By matching By MS/MS 1 1 3317900 1812700 1505200 2968 584 3178 6714;6715 5574 5574 70 780 1 SLLSSPTK KTYVSCLKSLLSSPTK SLLSSPTKDSKPNISA K S L T K D 0 0 0 0 0 0 0 0 0 0 2 1 0 0 1 3 1 0 0 0 0 0 8 0 831.47018 Q92667;I3NI36 Q92667 441 448 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.020131 75.387 By MS/MS 1 1121200 1121200 0 2969 1857 3179 6716 5575 5575 2623 1 SLNLQAESVR DIERASFRSLNLQAES NLQAESVRGFNMGRAI R S L V R G 1 1 1 0 0 1 1 0 0 0 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1115.5935 Q12923 Q12923 890 899 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.0051086 81.625 By MS/MS By MS/MS 1 1 2021400 946820 1074500 2970 1483 3180 6717;6718 5576;5577 5576 2021 2 SLPAPVAQRPDSPGGGLQAPGQK RESQKERKSLPAPVAQ GLQAPGQKRTPRRGEQ K S L Q K R 3 1 0 1 0 3 0 4 0 0 2 1 0 0 5 2 0 0 0 1 0 0 23 1 2227.1709 Q5JVS0 Q5JVS0 97 119 HABP4 Intracellular hyaluronan-binding protein 4 yes yes 3 0.0073166 48.616 By MS/MS By matching 1 1 8104500 3887200 4217300 2971 1609 3181 6719;6720 5578 5578 2236 1 SLPGPAPCLK APPLQSARSLPGPAPC PGPAPCLKHFPLDLRT R S L L K H 1 0 0 0 1 0 0 1 0 0 2 1 0 0 3 1 0 0 0 0 0 0 10 0 1038.5532 E9PJF6;H0YCL9;H0Y360;Q01433 E9PJF6 19 28 AMPD2 AMP deaminase 2 yes no 2 0.0041295 83.499 By MS/MS By MS/MS 1 1 18778000 9217900 9560200 2972 649 3182 6721;6722 5579;5580 5580 880 2 SLPSSSQLKGSPQAISR SPLYLVSRSLPSSSQL GSPQAISRASELHLLE R S L S R A 1 1 0 0 0 2 0 1 0 1 2 1 0 0 2 6 0 0 0 0 0 0 17 1 1741.9323 Q8WYP5 Q8WYP5 1150 1166 AHCTF1 Protein ELYS yes yes 2 0.01657 55.589 By matching By MS/MS 1 1 6043000 2788300 3254700 2973 1845 3183 6723;6724 5581 5581 2599 1 SLPTTVPESPNYR PEPSTIARSLPTTVPE VPESPNYRNTRTPRTP R S L Y R N 0 1 1 0 0 0 1 0 0 0 1 0 0 0 3 2 2 0 1 1 0 0 13 0 1459.7307 A0A0B4J210;Q6PKG0;E5RH50;H0YC33 A0A0B4J210 766 778 LARP1 La-related protein 1 yes no 2;3 0.00034017 87.138 By MS/MS By MS/MS 4 4 146970000 71560000 75409000 2974 194 3184;3185 6725;6726;6727;6728;6729;6730;6731;6732 5582;5583;5584;5585;5586;5587;5588;5589 5585 282;283 8 SLPVSVPVWGFK LPTQQYAKSLPVSVPV SVPVWGFKEKRTEARS K S L F K E 0 0 0 0 0 0 0 1 0 0 1 1 0 1 2 2 0 1 0 3 0 0 12 0 1314.7336 Q96B36 Q96B36 183 194 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 1.575E-08 117.95 By MS/MS By MS/MS 1 1 10899000 4746200 6152500 2975 1875 3186 6733;6734 5590;5591 5590 2648 2 SLQDIIAILGMDELSEEDKLTVSR QKILQDYKSLQDIIAI EDKLTVSRARKIQRFL K S L S R A 1 1 0 3 0 1 3 1 0 3 4 1 1 0 0 3 1 0 0 1 0 0 24 1 2674.3735 P06576;F8W079 P06576 433 456 ATP5B ATP synthase subunit beta, mitochondrial yes no 3 0.00092628 75.611 By MS/MS 1 3527600 0 3527600 2976 1226 3187 6735 5592 5592 147 1 SLSACQANTPR S L P R 2 1 1 0 1 1 0 0 0 0 1 0 0 0 1 2 1 0 0 0 0 0 11 0 1203.5666 REV__E9PN62 yes yes 2 0.017787 57.164 By MS/MS 1 2528600 0 2528600 + 2977 2199 3188 6736 5593 5593 3185 1 SLSAPLHPEFEEVYR TPRRRMKKSLSAPLHP PEFEEVYRFGAESRKL K S L Y R F 1 1 0 0 0 0 3 0 1 0 2 0 0 1 2 2 0 0 1 1 0 0 15 0 1772.8733 Q53HC0 Q53HC0 209 223 CCDC92 Coiled-coil domain-containing protein 92 yes yes 3 0.011601 48.823 By matching By MS/MS 1 1 1464400 864010 600410 2978 1599 3189 6737;6738 5594 5594 2218 1 SLSASPALGSTK IRGRAKSRSLSASPAL SPALGSTKEFRRTRSL R S L T K E 2 0 0 0 0 0 0 1 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1117.5979 O95544 O95544 46 57 NADK NAD kinase yes yes 2 0.00019003 103.46 By MS/MS By MS/MS 1 2 7747000 2638500 5108600 2979 1195 3190 6739;6740;6741 5595;5596;5597 5597 1596;1597 3 SLSDSESDDSK EKDGTKRKSLSDSESD DSESDDSKSKKKRDAA K S L S K S 0 0 0 3 0 0 1 0 0 0 1 1 0 0 0 5 0 0 0 0 0 0 11 0 1168.4732 Q13185;S4R2Y4 Q13185 93 103 CBX3 Chromobox protein homolog 3 yes no 2 2.7235E-56 166.29 By MS/MS By MS/MS 2 1 9784700 5172700 4612000 2980 1494 3191 6742;6743;6744 5598;5599;5600;5601;5602;5603;5604 5599 2041;2042 7 SLSDSESDDSKSK EKDGTKRKSLSDSESD ESDDSKSKKKRDAADK K S L S K K 0 0 0 3 0 0 1 0 0 0 1 2 0 0 0 6 0 0 0 0 0 0 13 1 1383.6001 Q13185;S4R2Y4 Q13185 93 105 CBX3 Chromobox protein homolog 3 yes no 2 3.6138E-06 109.95 By MS/MS By MS/MS 1 1 10936000 6309300 4627100 2981 1494 3192 6745;6746 5605;5606;5607;5608 5606 2041;2042 4 SLSEQPVMDTATATEQAK TSQGGVKRSLSEQPVM ATATEQAKQLVKSGAI R S L A K Q 3 0 0 1 0 2 2 0 0 0 1 1 1 0 1 2 3 0 0 1 0 0 18 0 1905.899 P18615;A0A0A0MT02;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 49 66 NELFE Negative elongation factor E yes no 2 0.0024759 69.188 By MS/MS By matching 2 1 31551000 25780000 5771200 2982 1289 3193;3194 6747;6748;6749 5609;5610 5610 168 1695;1696 2 SLSESSVIMDR SPGLARKRSLSESSVI ESSVIMDRAPSVYSFF R S L D R A 0 1 0 1 0 0 1 0 0 1 1 0 1 0 0 4 0 0 0 1 0 0 11 0 1222.5864 A0A0C4DGM5;Q9H2Y7;H3BNX5 A0A0C4DGM5 44 54 ZNF106 Zinc finger protein 106 yes no 2 0.0012317 98.943 By MS/MS By MS/MS 1 1 2585500 1197200 1388300 2983 214 3195 6750;6751 5611;5612 5612 310 2 SLSETVTHR SKLSPTKRSLSETVTH LSETVTHRAKIMKIAT R S L H R A 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 2 2 0 0 1 0 0 9 0 1028.5251 A0A1B0GUI1 A0A1B0GUI1 1081 1089 yes yes 2 0.01223 69.65 By MS/MS By MS/MS 1 1 2950700 1547000 1403800 2984 294 3196 6752;6753 5613;5614 5614 416 2 SLSFSEPQQPAPAMK SLSPVRSRSLSFSEPQ QQPAPAMKSHLIVTSP R S L M K S 2 0 0 0 0 2 1 0 0 0 1 1 1 1 3 3 0 0 0 0 0 0 15 0 1616.7868 Q9H8N7 Q9H8N7 447 461 ZNF395 Zinc finger protein 395 yes yes 2 0.0081938 57.034 By matching By MS/MS 1 1 1427500 613240 814230 2985 2021 3197 6754;6755 5615 5615 2891 1 SLSGSPLK WCHVHLKKSLSGSPLK SLSGSPLKVKNSKNSK K S L L K V 0 0 0 0 0 0 0 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 8 0 787.44397 Q9UIG0 Q9UIG0 345 352 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.021518 73.499 By MS/MS By matching 1 1 3061800 1495200 1566500 2986 2100 3198 6756;6757 5616 5616 3009;3010 1 SLSGSPLKVK WCHVHLKKSLSGSPLK SGSPLKVKNSKNSKSP K S L V K N 0 0 0 0 0 0 0 1 0 0 2 2 0 0 1 3 0 0 0 1 0 0 10 1 1014.6073 Q9UIG0 Q9UIG0 345 354 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.014185 77.387 By MS/MS By MS/MS 2 1 5472200 3171900 2300300 2987 2100 3199;3200 6758;6759;6760 5617;5618;5619 5619 3009;3010 3 SLSIEIGHEVK RSKVTAIKSLSIEIGH IEIGHEVKTQNKLLAE K S L V K T 0 0 0 0 0 0 2 1 1 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1210.6558 C9JTT8;Q68DU7;H7C1N3;O15155 C9JTT8 48 58 BET1;DKFZp781C0425 BET1 homolog yes no 2 3.8297E-16 145.81 By MS/MS By MS/MS 1 1 22677000 9963800 12713000 2988 481 3201 6761;6762 5620;5621 5620 670 2 SLSLGDKEISR SVQGSHKRSLSLGDKE LGDKEISRSSPSPALE R S L S R S 0 1 0 1 0 0 1 1 0 1 2 1 0 0 0 3 0 0 0 0 0 0 11 1 1203.6459 Q9UMZ2 Q9UMZ2 1073 1083 SYNRG Synergin gamma yes yes 2 0.010453 76.24 By matching By MS/MS 1 1 23659000 11261000 12398000 2989 2127 3202 6763;6764 5622 5622 3053 1 SLSPGGAALGYR PGGGGGQRSLSPGGAA GGAALGYRDYRLQQLA R S L Y R D 2 1 0 0 0 0 0 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 12 0 1147.5986 A0A087WWP4;Q96T37 A0A087WWP4 248 259 RBM15 Putative RNA-binding protein 15 yes no 2 0.0048552 70.089 By matching By MS/MS 1 1 97860000 44274000 53586000 2990 67 3203 6765;6766 5623 5623 90 1 SLSPILPGR ESTSRNRRSLSPILPG LSPILPGRHSPAPPPD R S L G R H 0 1 0 0 0 0 0 1 0 1 2 0 0 0 2 2 0 0 0 0 0 0 9 0 938.55492 M0QZS0;A0A087WZG4;Q6ZSZ5 M0QZS0 740 748 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes no 2 0.0034093 89.047 By MS/MS By MS/MS 1 1 2159200 948130 1211000 2991 91 3204 6767;6768 5624;5625;5626 5625 111 3 SLSPSHLTEDR VVRPQESRSLSPSHLT PSHLTEDRQGRWKEED R S L D R Q 0 1 0 1 0 0 1 0 1 0 2 0 0 0 1 3 1 0 0 0 0 0 11 0 1240.6048 Q5T200 Q5T200 875 885 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 0.002716 72.289 By matching By MS/MS 1 1 1858900 1150000 708820 2992 1624 3205 6769;6770 5627 5627 2258 1 SLSPVAAPPLREPR GGYQYKQRSLSPVAAP APPLREPRARHAAAAF R S L P R A 2 2 0 0 0 0 1 0 0 0 2 0 0 0 4 2 0 0 0 1 0 0 14 1 1488.8413 Q8NDT2 Q8NDT2 265 278 RBM15B Putative RNA-binding protein 15B yes yes 3 0.021055 46.069 By matching By MS/MS 1 1 4032700 1920300 2112400 2993 1800 3206 6771;6772 5628 5628 2532 1 SLSQGSTNSNMLDVQGGAHK PAMMFRQRSLSQGSTN DVQGGAHKKRARRSSL R S L H K K 1 0 2 1 0 2 0 3 1 0 2 1 1 0 0 4 1 0 0 1 0 0 20 0 2029.9487 B7Z7Y1;E9PCH4;Q8TEU7 B7Z7Y1 1068 1087 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 3 0.0052226 52.754 By matching By MS/MS 1 1 2902600 1198800 1703800 2994 409 3207 6773;6774 5629 5629 572;573 1 SLSSGSNFCSEQK SLVKKKERSLSSGSNF SNFCSEQKTSGIINKF R S L Q K T 0 0 1 0 1 1 1 1 0 0 1 1 0 1 0 5 0 0 0 0 0 0 13 0 1429.6144 O95243 O95243 316 328 MBD4 Methyl-CpG-binding domain protein 4 yes yes 2 0.0045476 69.01 By MS/MS By MS/MS 1 1 2868600 1490100 1378500 2995 1186 3208 6775;6776 5630;5631 5630 1581 2 SLSSPTVTLSAPLEGAK EPQIRRPRSLSSPTVT SAPLEGAKDSPVRRAV R S L A K D 2 0 0 0 0 0 1 1 0 0 3 1 0 0 2 4 2 0 0 1 0 0 17 0 1656.8934 A0A1B0GVY1;Q96PU5 A0A1B0GVY1 725 741 NEDD4L E3 ubiquitin-protein ligase NEDD4-like yes no 2 3.436E-30 133.87 By MS/MS By MS/MS 1 1 12662000 6785200 5876300 2996 302 3209 6777;6778 5632;5633 5633 432 2 SLSSSLDDTEVK TETPIVSKSLSSSLDD SLDDTEVKKVMEECKR K S L V K K 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 4 1 0 0 1 0 0 12 0 1279.6143 O95292 O95292 156 167 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 9.6618E-05 105.65 By MS/MS By MS/MS 1 1 13585000 5583200 8001700 2997 1188 3210 6779;6780 5634;5635 5635 1585 2 SLSSSLDDTEVKK TETPIVSKSLSSSLDD LDDTEVKKVMEECKRL K S L K K V 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 4 1 0 0 1 0 0 13 1 1407.7093 O95292 O95292 156 168 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 3 0.012972 54.005 By matching By MS/MS 1 1 584540 295160 289380 2998 1188 3211 6781;6782 5636 5636 1585 0 SLSTSGESLYHVLGLDK ________________ YHVLGLDKNATSDDIK R S L D K N 0 0 0 1 0 0 1 2 1 0 4 1 0 0 0 4 1 0 1 1 0 0 17 0 1804.9207 Q9H3Z4 Q9H3Z4 8 24 DNAJC5 DnaJ homolog subfamily C member 5 yes yes 2 0.0017006 78.078 By MS/MS 1 1383300 0 1383300 2999 2004 3212 6783 5637;5638 5638 2867 2 SLSVPAASTAKPPPLPR HRDTALYKSLSVPAAS AKPPPLPRSNTDSAVV K S L P R S 3 1 0 0 0 0 0 0 0 0 2 1 0 0 5 3 1 0 0 1 0 0 17 1 1687.9621 H3BMQ0;P49815 H3BMQ0 1219 1235 TSC2 Tuberin yes no 3 0.018386 48.177 By matching By MS/MS 1 1 1285900 719310 566610 3000 908 3213 6784;6785 5639 5639 1218 0 SLSVPVDLSR PPSKRHCRSLSVPVDL SVPVDLSRWQPVWRPA R S L S R W 0 1 0 1 0 0 0 0 0 0 2 0 0 0 1 3 0 0 0 2 0 0 10 0 1071.5924 Q9NYF3;D6RHW3 Q9NYF3 120 129 FAM53C Protein FAM53C yes no 2 0.0054622 80.245 By MS/MS By MS/MS 1 1 6763200 3228200 3535000 3001 2072 3214 6786;6787 5640;5641 5641 2964 2 SLSYEEPR PIRQGVVRSLSYEEPR SLSYEEPRRHSPPIEK R S L P R R 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 2 0 0 1 0 0 0 8 0 979.46108 F5GZK9;Q8IZD4 F5GZK9 147 154 DCP1B mRNA-decapping enzyme 1B yes no 2 0.0096896 85.807 By MS/MS By MS/MS 1 1 12484000 6102800 6381100 3002 705 3215 6788;6789 5642;5643;5644 5644 942 3 SLSYSPVER IDSLRDSRSLSYSPVE LSYSPVERRRPSPQPS R S L E R R 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 1 1 0 0 9 0 1036.5189 Q9UQ35;I3L4U6 Q9UQ35 2690 2698 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.014197 67.214 By MS/MS 1 3422300 3422300 0 3003 2134 3216 6790 5645 5645 3088 1 SLTAHSLLPLAEK PEPLRRHRSLTAHSLL SLLPLAEKQRRVLRNL R S L E K Q 2 0 0 0 0 0 1 0 1 0 4 1 0 0 1 2 1 0 0 0 0 0 13 0 1378.782 F2Z2E2;Q86VI3 F2Z2E2 1381 1393 IQGAP3 Ras GTPase-activating-like protein IQGAP3 yes no 2 1.7058E-10 126.09 By MS/MS 1 2050400 0 2050400 3004 686 3217 6791 5646 5646 923 1 SLTNSHLEK ISDRESRRSLTNSHLE LTNSHLEKKKCDEYIP R S L E K K 0 0 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 9 0 1027.5298 F8VX12;F8VX04;Q9H2H9 F8VX12 52 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 2 4.0222E-26 158.08 By MS/MS By MS/MS 1 1 22258000 9351700 12906000 3005 746 3218 6792;6793 5647;5648 5648 989;3480 2 SLTNSHLEKK ISDRESRRSLTNSHLE TNSHLEKKKCDEYIPG R S L K K K 0 0 1 0 0 0 1 0 1 0 2 2 0 0 0 2 1 0 0 0 0 0 10 1 1155.6248 F8VX12;F8VX04;Q9H2H9 F8VX12 52 61 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 3 0.013383 47.712 By MS/MS 1 1622500 1622500 0 3006 746 3219 6794 5649 5649 989;3480 1 SLTRSPPAIR PRTARGKRSLTRSPPA TRSPPAIRRRSASGSS R S L I R R 1 2 0 0 0 0 0 0 0 1 1 0 0 0 2 2 1 0 0 0 0 0 10 1 1096.6353 Q9UQ35 Q9UQ35 2067 2076 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.016654 58.981 By matching By MS/MS 1 1 9184200 4514100 4670100 3007 2134 3220 6795;6796 5650 5650 3089;3090;3967 1 SLTVSDDAESSEPER RRGRKPKRSLTVSDDA AESSEPERKRQKSVSD R S L E R K 1 1 0 2 0 0 3 0 0 0 1 0 0 0 1 4 1 0 0 1 0 0 15 0 1620.7115 Q8NFC6;H0Y9Y2 Q8NFC6 2954 2968 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 2 0.015391 52.42 By MS/MS By MS/MS 2 2 3736400 1935500 1800900 3008 1803 3221 6797;6798;6799;6800 5651;5652 5652 2538;2539 2 SLVEQMRDMGSRDSASSVPR NSDTSVQRSLVEQMRD DSASSVPRINDSQEGG R S L P R I 1 3 0 2 0 1 1 1 0 0 1 0 2 0 1 5 0 0 0 2 0 0 20 2 2207.0423 Q96BT7 Q96BT7 540 559 ALKBH8 Alkylated DNA repair protein alkB homolog 8 yes yes 3 0.007298 43.208 By matching By MS/MS 1 1 5206200 2708300 2497900 3009 1877 3222 6801;6802 5653 5653 272;273 2649 1 SLYASSPGGVYATR ALRPSTSRSLYASSPG PGGVYATRSSAVRLRS R S L T R S 2 1 0 0 0 0 0 2 0 0 1 0 0 0 1 3 1 0 2 1 0 0 14 0 1427.7045 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 51 64 VIM Vimentin yes no 2 3.2477E-09 111.81 By MS/MS By MS/MS 4 4 66254000 31056000 35198000 3010 1243 3223;3224 6803;6804;6805;6806;6807;6808;6809;6810 5654;5655;5656;5657;5658;5659;5660;5661;5662 5661 1643;3644;4264;4265 9 SLYDEVAAQGEVVR SASILESKSLYDEVAA AAQGEVVRKLKAEKSP K S L V R K 2 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 3 0 0 14 0 1534.7627 V9GYZ6;P07814 V9GYZ6 832 845 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2 0.0050129 57.175 By MS/MS 1 2459000 0 2459000 3011 1233 3225 6811 5663 5663 4260 1 SLYDEVAAQGEVVRK SASILESKSLYDEVAA AQGEVVRKLKAEKSPK K S L R K L 2 1 0 1 0 1 2 1 0 0 1 1 0 0 0 1 0 0 1 3 0 0 15 1 1662.8577 V9GYZ6;P07814 V9GYZ6 832 846 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2 0.0018382 69.261 By MS/MS By MS/MS 1 1 2142000 985790 1156200 3012 1233 3226 6812;6813 5664;5665 5665 4260 2 SLYESFVSSSDR SSRRPQRKSLYESFVS SFVSSSDRLRELGPDG K S L D R L 0 1 0 1 0 0 1 0 0 0 1 0 0 1 0 5 0 0 1 1 0 0 12 0 1375.6256 P18615;A0A0A0MT02;A2ABK4 P18615 131 142 NELFE Negative elongation factor E yes no 2 0.00025712 101.89 By MS/MS By MS/MS 1 1 2121000 506540 1614400 3013 1289 3227 6814;6815 5666;5667 5667 1697 2 SLYSAISLFNNPVK PTVPKMKKSLYSAISL SLFNNPVKYWEMQPAT K S L V K Y 1 0 2 0 0 0 0 0 0 1 2 1 0 1 1 3 0 0 1 1 0 0 14 0 1551.8297 Q9BXN1 Q9BXN1 342 355 ASPN Asporin yes yes 2 2.3798E-09 108.7 By MS/MS 1 0 0 0 3014 1974 3228 6816 5668 5668 1 SMEVLSVTDGGSPVPAR GKRRPERKSMEVLSVT GGSPVPARRAIEMAQH K S M A R R 1 1 0 1 0 0 1 2 0 0 1 0 1 0 2 3 1 0 0 3 0 0 17 0 1700.8403 Q8IWQ3 Q8IWQ3 382 398 BRSK2 Serine/threonine-protein kinase BRSK2 yes yes 2 0.0037192 77.746 By matching By MS/MS 1 1 1065000 481710 583270 3015 1753 3229 6817;6818 5669 5669 256 2468 1 SMGTGDTPGLEVPSSPLR TRTRPVTRSMGTGDTP EVPSSPLRKAKRARLC R S M L R K 0 1 0 1 0 0 1 3 0 0 2 0 1 0 3 3 2 0 0 1 0 0 18 0 1799.8724 C9J0I9;Q86WB0 C9J0I9 338 355 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 1.7047E-97 166.77 By MS/MS By MS/MS 1 2 16530000 8854900 7675400 3016 432 3230 6819;6820;6821 5670;5671 5671 55 617;618 2 SMGTGDTPGLEVPSSPLRK TRTRPVTRSMGTGDTP VPSSPLRKAKRARLCS R S M R K A 0 1 0 1 0 0 1 3 0 0 2 1 1 0 3 3 2 0 0 1 0 0 19 1 1927.9673 C9J0I9;Q86WB0 C9J0I9 338 356 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 0.0007334 82.362 By MS/MS By MS/MS 3 4 48282000 20916000 27366000 3017 432 3231;3232 6822;6823;6824;6825;6826;6827;6828 5672;5673;5674;5675;5676;5677 5675 55 617;618 6 SMSAPVIFDR IAPRIESKSMSAPVIF SAPVIFDRSREEIEEE K S M D R S 1 1 0 1 0 0 0 0 0 1 0 0 1 1 1 2 0 0 0 1 0 0 10 0 1121.5539 O60749;D6RC15 O60749 117 126 SNX2 Sorting nexin-2 yes no 2 0.0068376 72.652 By MS/MS By matching 1 1 2094500 776540 1318000 3018 1143 3233 6829;6830 5678 5678 1523 1 SMSASSGLSAR KSRPEPGRSMSASSGL ASSGLSARSSAQNGSA R S M A R S 2 1 0 0 0 0 0 1 0 0 1 0 1 0 0 5 0 0 0 0 0 0 11 0 1052.4921 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25 H0Y7V8 879 889 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha yes no 2 0.0033395 80.312 By MS/MS By MS/MS 1 1 1874700 858300 1016400 3019 142 3234 6831;6832 5679;5680 5679 190;191 2 SMSIDDTPR DQDDLKRRSMSIDDTP MSIDDTPRGSWACSIF R S M P R G 0 1 0 2 0 0 0 0 0 1 0 0 1 0 1 2 1 0 0 0 0 0 9 0 1020.4546 Q96N67;A0A0C4DGY6;A0A1B0GVW2;A0A1B0GUE9 Q96N67 180 188 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.0096162 76.332 By MS/MS By MS/MS 1 1 13600000 6035000 7564700 3020 1911 3235 6833;6834 5681;5682 5682 2705 2 SNAGMKHGTMDTESK TFHPGTTKSNAGMKHG GTMDTESKKDPEGCDK K S N S K K 1 0 1 1 0 0 1 2 1 0 0 2 2 0 0 2 2 0 0 0 0 0 15 1 1592.6923 P19838 P19838 426 440 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes yes 2 0.02157 45.438 By MS/MS 1 0 0 0 3021 1297 3236 6835 5683 5683 181 170 1705;3666 1 SNESVDIQDQEEK RSGKWKNKSNESVDIQ DIQDQEEKVVKQECIK K S N E K V 0 0 1 2 0 2 3 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 13 0 1519.6638 Q5UIP0 Q5UIP0 1576 1588 RIF1 Telomere-associated protein RIF1 yes yes 2 1.8007E-09 118.51 By MS/MS By MS/MS 1 1 13427000 5338500 8088900 3022 1641 3237 6836;6837 5684;5685 5684 2284 2 SNLHLITHK TVCGKTFKSNLHLITH NLHLITHKRTHIKNTT K S N H K R 0 0 1 0 0 0 0 0 2 1 2 1 0 0 0 1 1 0 0 0 0 0 9 0 1061.5982 Q96LX8 Q96LX8 408 416 ZNF597 Zinc finger protein 597 yes yes 2 0.019866 60.478 By MS/MS 1 452000 452000 0 3023 1907 3238 6838 5686 5686 264 3890 1 SNMSPHGLPAR GERPGPNRSNMSPHGL SPHGLPARSSGSPKFA R S N A R S 1 1 1 0 0 0 0 1 1 0 1 0 1 0 2 2 0 0 0 0 0 0 11 0 1165.5662 H0Y4T7;E7ESY4;Q13330 H0Y4T7 238 248 MTA1 Metastasis-associated protein MTA1 yes no 3 0.0091563 51.762 By MS/MS 1 872980 872980 0 3024 588 3239 6839 5687 5687 71 783 1 SNPSIQATLNK SSGLQSSRSNPSIQAT SIQATLNKTVLSSSLN R S N N K T 1 0 2 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 11 0 1171.6197 Q6UUV7 Q6UUV7 329 339 CRTC3 CREB-regulated transcription coactivator 3 yes yes 2 0.0053615 71.933 By MS/MS By matching 1 1 5686700 2800800 2885900 3025 1691 3240 6840;6841 5688 5688 2367 1 SNQNGKDSKPSSTPR TPAKNAQKSNQNGKDS SKPSSTPRSKGQESFK K S N P R S 0 1 2 1 0 1 0 1 0 0 0 2 0 0 2 4 1 0 0 0 0 0 15 2 1601.7758 P06748 P06748 207 221 NPM1 Nucleophosmin yes yes 3 0.0065611 59.248 By MS/MS 1 4252500 0 4252500 3026 1228 3241 6842 5689 5689 403 1620;1621;3641 1 SNSAPLIHGLSDTSPVFQAEAPSAR GGGGGLRRSNSAPLIH QAEAPSARRNSTTFPS R S N A R R 4 1 1 1 0 1 1 1 1 1 2 0 0 1 3 5 1 0 0 1 0 0 25 0 2551.2667 Q96E09 Q96E09 35 59 FAM122A Protein FAM122A yes yes 3 0.017595 40.404 By MS/MS 1 5044800 0 5044800 3027 1885 3242 6843 5690 5690 2661 1 SNSDESNFSEKLR GATNNLSRSNSDESNF SNFSEKLRASTVMYHP R S N L R A 0 1 2 1 0 0 2 0 0 0 1 1 0 1 0 4 0 0 0 0 0 0 13 1 1511.6852 A0A087WWW9;O95999 A0A087WWW9 125 137 BCL10 B-cell lymphoma/leukemia 10 yes no 2 0.0013272 79.201 By MS/MS 1 2796700 0 2796700 3028 69 3243 6844 5691 5691 91 1 SNSFNNPLGNR WQPNIPVRSNSFNNPL FNNPLGNRASHSANSQ R S N N R A 0 1 4 0 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 11 0 1218.5741 O95835 O95835 462 472 LATS1 Serine/threonine-protein kinase LATS1 yes yes 2 0.0037459 78.334 By MS/MS By matching 1 1 11987000 5466200 6520600 3029 1200 3244 6845;6846 5692 5692 1607 1 SNSLPHSAVSNAGSK SVPPPLPRSNSLPHSA AVSNAGSKSSVMDGAI R S N S K S 2 0 2 0 0 0 0 1 1 0 1 1 0 0 1 5 0 0 0 1 0 0 15 0 1454.7114 A0A088AWN2;Q8TBZ3 A0A088AWN2 463 477 WDR20 WD repeat-containing protein 20 yes no 2 0.00011708 84.195 By MS/MS By matching 1 1 10766000 6404400 4361700 3030 120 3245 6847;6848 5693 5693 163 1 SNSLSEQLAINTSPDAVK GEPALRTKSNSLSEQL NTSPDAVKAKLISRMA K S N V K A 2 0 2 1 0 1 1 0 0 1 2 1 0 0 1 4 1 0 0 1 0 0 18 0 1872.9429 A0A0A0MT60;Q5T1M5;X6RKW4 A0A0A0MT60 369 386 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 5.2421E-70 155.92 By MS/MS By MS/MS 1 1 9855900 4869100 4986800 3031 174 3246 6849;6850 5694;5695;5696 5694 242;243 3 SNSPLPVPPSK SRSRSQSRSNSPLPVP PLPVPPSKARSVSPPP R S N S K A 0 0 1 0 0 0 0 0 0 0 1 1 0 0 4 3 0 0 0 1 0 0 11 0 1121.6081 Q13247 Q13247 301 311 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 2 0.0018055 91.307 By MS/MS By MS/MS 1 1 6587900 2748500 3839400 3032 1497 3247 6851;6852 5697;5698;5699;5700;5701 5697 2048 5 SNSQSYIGRPIHLDK SFIGREKRSNSQSYIG GRPIHLDKILMSKVKV R S N D K I 0 1 1 1 0 1 0 1 1 2 1 1 0 0 1 3 0 0 1 0 0 0 15 1 1713.8798 Q15139;F8WBA3 Q15139 247 261 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 3 0.0042422 57.936 By matching By MS/MS 1 1 6497800 3078500 3419300 3033 1545 3248 6853;6854 5702 5702 2133 1 SNSSEALLVDR LFVARTRRSNSSEALL SEALLVDRAAGGGAGS R S N D R A 1 1 1 1 0 0 1 0 0 0 2 0 0 0 0 3 0 0 0 1 0 0 11 0 1189.5939 Q96HB5 Q96HB5 358 368 CCDC120 Coiled-coil domain-containing protein 120 yes yes 2 0.005277 72.209 By MS/MS By MS/MS 1 1 2284000 1173400 1110600 3034 1896 3249 6855;6856 5703;5704 5703 2675;2676;2677 2 SNSTSSMSSGLPEQDR DTSKPFPRSNSTSSMS SGLPEQDRMAMTLPRN R S N D R M 0 1 1 1 0 1 1 1 0 0 1 0 1 0 1 6 1 0 0 0 0 0 16 0 1681.7213 P42684 P42684 781 796 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0026481 79.97 By MS/MS By MS/MS 1 1 5163800 2125100 3038800 3035 1358 3250 6857;6858 5705;5706 5705 1780;3687 2 SNSVGIQDAFNDGSDSTFQK PPLPGMSRSNSVGIQD GSDSTFQKRNSMTPNP R S N Q K R 1 0 2 3 0 2 0 2 0 1 0 1 0 2 0 4 1 0 0 1 0 0 20 0 2115.9345 O14497;A0A087WUV6;H0Y488;A0A1B0GTU5 O14497 1182 1201 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 0.0072917 56.055 By MS/MS 1 2943400 0 2943400 3036 1091 3251 6859 5707 5707 1438;1439 1 SNSVGIQDAFNDGSDSTFQKR PPLPGMSRSNSVGIQD SDSTFQKRNSMTPNPG R S N K R N 1 1 2 3 0 2 0 2 0 1 0 1 0 2 0 4 1 0 0 1 0 0 21 1 2272.0356 O14497;A0A087WUV6;H0Y488;A0A1B0GTU5 O14497 1182 1202 ARID1A AT-rich interactive domain-containing protein 1A yes no 3 0.00054075 70.533 By MS/MS By MS/MS 1 1 6846100 3649300 3196800 3037 1091 3252 6860;6861 5708;5709 5709 1438;1439 2 SNSVSLVPPGSSHTLPR SNHLSLSKSNSVSLVP GSSHTLPRRAQSLKAP K S N P R R 0 1 1 0 0 0 0 1 1 0 2 0 0 0 3 5 1 0 0 2 0 0 17 0 1733.906 Q6R327 Q6R327 1282 1298 RICTOR Rapamycin-insensitive companion of mTOR yes yes 2;3 0.0017096 61.959 By matching By MS/MS 2 2 4609400 1780600 2828800 3038 1687 3253 6862;6863;6864;6865 5710;5711 5710 2358 2 SNSWQGNLGGNK ICENGRPRSNSWQGNL QGNLGGNKKKIRGKRF R S N N K K 0 0 3 0 0 1 0 3 0 0 1 1 0 0 0 2 0 1 0 0 0 0 12 0 1260.5847 H7C3I4;H7C0Q9;Q9P0K1 H7C3I4 161 172 ADAM22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 2 0.0056316 68.463 By MS/MS By MS/MS 1 1 3355300 1782200 1573200 3039 951 3254 6866;6867 5712;5713 5713 1276 2 SNSWVNTGGPK IGSKGLDRSNSWVNTG WVNTGGPKAAPWGSNP R S N P K A 0 0 2 0 0 0 0 2 0 0 0 1 0 0 1 2 1 1 0 1 0 0 11 0 1145.5465 Q96N67;A0A0U1RRC1;A0A1B0GWE0 Q96N67 927 937 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.0018241 92.781 By MS/MS By MS/MS 1 1 12498000 6012300 6485800 3040 1911 3255 6868;6869 5714;5715 5714 2706 2 SNTEPQSPPIASPK DTSTWGLKSNTEPQSP SPPIASPKAITKPVRR K S N P K A 1 0 1 0 0 1 1 0 0 1 0 1 0 0 4 3 1 0 0 0 0 0 14 0 1451.7256 F8WF45;P82094 F8WF45 66 79 TMF1 TATA element modulatory factor yes no 2 3.8068E-06 105.39 By MS/MS By MS/MS 2 2 6204600 3278600 2926000 3041 774 3256;3257 6870;6871;6872;6873 5716;5717;5718;5719;5720 5719 1031;1032 5 SNTPILVDGK LHVALRNRSNTPILVD TPILVDGKDVMPEVNK R S N G K D 0 0 1 1 0 0 0 1 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1042.5659 K7EP41;K7EPY4;A0A0J9YXP8;A0A0J9YX90;A0A0J9YYH3;K7EQ48;A0A0A0MTS2;P06744 K7EP41 107 116 GPI Glucose-6-phosphate isomerase yes no 2 0.015619 59.931 By MS/MS By matching 1 1 1538900 723890 815050 3042 185 3258 6874;6875 5721 5721 259 1 SNVSDAVAQSTR EKLRGWLKSNVSDAVA DAVAQSTRIIYGGSVT K S N T R I 2 1 1 1 0 1 0 0 0 0 0 0 0 0 0 3 1 0 0 2 0 0 12 0 1233.5949 P60174 P60174 232 243 TPI1 Triosephosphate isomerase yes yes 2 0.017249 69.346 By MS/MS By matching 1 1 1589600 807100 782510 3043 1420 3259 6876;6877 5722 5722 0 SNVSSPATPTASSSSSTTPTRK VEGKRKRRSNVSSPAT SSTTPTRKITESPRAS R S N R K I 2 1 1 0 0 0 0 0 0 0 0 1 0 0 3 8 5 0 0 1 0 0 22 1 2150.0451 Q12888;A6NNK5;H7BZY0 Q12888 1631 1652 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.004149 48.896 By MS/MS 1 1475700 1475700 0 3044 1481 3260 6878 5723 5723 2014 1 SNYTPRSNGSTDLQTNQVIEVGK WWFLGNLRSNYTPRSN NQVIEVGKNDDLEDSK R S N G K N 0 1 3 1 0 2 1 2 0 1 1 1 0 0 1 3 3 0 1 2 0 0 23 1 2507.2252 Q5T0Y3 Q5T0Y3 36 58 MDM4 yes yes 3 0.0138 41.912 By matching By MS/MS 1 1 1670200 937120 733120 3045 1622 3261 6879;6880 5724 5724 219 2253;3793 1 SPALKSPLQSVVVR SELSPRERSPALKSPL PLQSVVVRRRSPRPSP R S P V R R 1 1 0 0 0 1 0 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 14 1 1479.8773 Q9Y2W1 Q9Y2W1 248 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.005944 71.03 By MS/MS By matching 1 1 5971700 3042600 2929100 3046 2146 3262 6881;6882 5725 5725 3116;3117 1 SPARTPPSEEDSAEAER KEMPQDLRSPARTPPS EDSAEAERLKTEGNEQ R S P E R L 3 2 0 1 0 0 4 0 0 0 0 0 0 0 3 3 1 0 0 0 0 0 17 1 1827.8235 O43765;K7EMD6 O43765 77 93 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 3 0.0084635 69.069 By MS/MS By MS/MS 1 1 2695200 1162700 1532500 3047 1128 3263 6883;6884 5726;5727 5726 3607 2 SPAVATSTAAPPPPSSPLPSK MEVFLQEKSPAVATST PSSPLPSKSTSAPQMS K S P S K S 4 0 0 0 0 0 0 0 0 0 1 1 0 0 7 5 2 0 0 1 0 0 21 0 1959.0313 F8W726;Q14157 F8W726 450 470 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 2.7011E-11 105.5 By MS/MS By MS/MS 2 2 165730000 83498000 82229000 3048 754 3264 6885;6886;6887;6888 5728;5729;5730;5731;5732;5733;5734 5729 1006;1007 7 SPAYSVSTIEPR RRESHHLRSPAYSVST SVSTIEPREDLLSPVQ R S P P R E 1 1 0 0 0 0 1 0 0 1 0 0 0 0 2 3 1 0 1 1 0 0 12 0 1305.6565 O94991 O94991 830 841 SLITRK5 SLIT and NTRK-like protein 5 yes yes 2 0.019456 47.302 By MS/MS By matching 1 1 4206900 1705000 2501900 3049 1180 3265 6889;6890 5735 5735 4252 1 SPDKPGGSPSASR REAREAARSPDKPGGS GGSPSASRRKGRASEH R S P S R R 1 1 0 1 0 0 0 2 0 0 0 1 0 0 3 4 0 0 0 0 0 0 13 1 1241.6 Q9Y3T9 Q9Y3T9 49 61 NOC2L Nucleolar complex protein 2 homolog yes yes 2 0.00094809 81.771 By MS/MS By MS/MS 1 1 8560400 3688800 4871600 3050 2156 3266 6891;6892 5736;5737 5736 3135;3136 2 SPGAPGPLTLK AQNQNQVRSPGAPGPL APGPLTLKEVEELEQL R S P L K E 1 0 0 0 0 0 0 2 0 0 2 1 0 0 3 1 1 0 0 0 0 0 11 0 1036.5917 H0Y2Y8;Q15942;C9JJK5 H0Y2Y8 312 322 ZYX Zyxin yes no 2 0.0051173 72.731 By matching By MS/MS 1 1 19664000 7588400 12075000 3051 816 3267 6893;6894 5738 5738 1096 1 SPGASNFSTLPK PRGPSTPKSPGASNFS SNFSTLPKISPSSLSN K S P P K I 1 0 1 0 0 0 0 1 0 0 1 1 0 1 2 3 1 0 0 0 0 0 12 0 1204.6088 Q9Y4E8 Q9Y4E8 229 240 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 0.0014628 84.173 By matching By MS/MS 1 1 5810000 2025100 3784900 3052 2159 3268 6895;6896 5739 5739 3138 1 SPGEPGGAAPER RDGPGLERSPGEPGGA PGGAAPEREVPAAARG R S P E R E 2 1 0 0 0 0 2 3 0 0 0 0 0 0 3 1 0 0 0 0 0 0 12 0 1123.5258 Q96EB6 Q96EB6 47 58 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 2 0.020709 54.343 By matching By MS/MS 1 1 2040700 998310 1042400 3053 1887 3269 6897;6898 5740 5740 2664 1 SPGHMVILDQTK EKKRISSKSPGHMVIL MVILDQTKGDHCRPSR K S P T K G 0 0 0 1 0 1 0 1 1 1 1 1 1 0 1 1 1 0 0 1 0 0 12 0 1324.6809 Q9NWH9;H7C3F4 Q9NWH9 553 564 SLTM SAFB-like transcription modulator yes no 2;3 0.0001496 104.41 By MS/MS By MS/MS 2 3 14524000 6212000 8312000 3054 2064 3270;3271 6899;6900;6901;6902;6903 5741;5742;5743;5744;5745 5741 299 2953 5 SPGLCSDSLEK GDSGSRRRSPGLCSDS LCSDSLEKSLRITVGN R S P E K S 0 0 0 1 1 0 1 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 11 0 1191.5442 Q5VUA4 Q5VUA4 136 146 ZNF318 Zinc finger protein 318 yes yes 2 0.0018411 94.122 By MS/MS By MS/MS 1 1 3716200 1557000 2159200 3055 1649 3272 6904;6905 5746;5747 5747 2307 2 SPGLLDTTPIR AADSRDCRSPGLLDTT LLDTTPIRGSCTTQRK R S P I R G 0 1 0 1 0 0 0 1 0 1 2 0 0 0 2 1 2 0 0 0 0 0 11 0 1168.6452 Q8IY92 Q8IY92 1469 1479 SLX4 Structure-specific endonuclease subunit SLX4 yes yes 2 0.020465 61.691 By MS/MS 1 0 0 0 3056 1760 3273 6906 5748 5748 2476 1 SPGSPVGEGTGSPPK EKYKAKSRSPGSPVGE EGTGSPPKWQIGEQEF R S P P K W 0 0 0 0 0 0 1 4 0 0 0 1 0 0 4 3 1 0 0 1 0 0 15 0 1352.6572 E7EV99;E7ENY0;P35611;A0A0A0MSR2;H0Y9H2 E7EV99 355 369 ADD1 Alpha-adducin yes no 2 1.7344E-75 170.74 By MS/MS By MS/MS 1 1 14071000 7421400 6649600 3057 568 3274 6907;6908 5749;5750 5750 751 2 SPGVAAAVAEDGGLKK MPVKKKRKSPGVAAAV AEDGGLKKCKISRS__ K S P K K C 4 0 0 1 0 0 1 3 0 0 1 2 0 0 1 1 0 0 0 2 0 0 16 1 1468.7886 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 9 24 DCUN1D5 DCN1-like protein;DCN1-like protein 5 yes no 2 0.0018139 80.508 By MS/MS By MS/MS 1 1 8608100 3546600 5061500 3058 664 3275 6909;6910 5751;5752 5752 898 1 SPGYESESSRYESQNTELK RSPGYEPRSPGYESES ESQNTELKTQSPEFEA R S P L K T 0 1 1 0 0 1 4 1 0 0 1 1 0 0 1 5 1 0 2 0 0 0 19 1 2189.9713 H3BS42;Q9H5H4 H3BS42 108 126 ZNF768 Zinc finger protein 768 yes no 3 0.0076615 50.232 By matching By MS/MS 1 1 11188000 5665200 5522700 3059 928 3276 6911;6912 5753 5753 1243 1 SPHKDLGHR ENLAKSRKSPHKDLGH PHKDLGHRKEENRRPL K S P H R K 0 1 0 1 0 0 0 1 2 0 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1045.5417 C9JAT7;O94888 C9JAT7 188 196 UBXN7 UBX domain-containing protein 7 yes no 3 0.016884 56.551 By matching By MS/MS 1 1 1111100 458180 652920 3060 454 3277 6913;6914 5754 5754 646 1 SPIIHSPK RSRSPKSRSPIIHSPK SPIIHSPKRRDRRSPK R S P P K R 0 0 0 0 0 0 0 0 1 2 0 1 0 0 2 2 0 0 0 0 0 0 8 0 877.50215 E9PKN0;E9PQ01;O94913 E9PKN0 489 496 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 2 0.021302 73.841 By MS/MS By matching 1 1 1357800 683090 674730 3061 657 3278 6915;6916 5755 5755 892 1 SPISVPGGSALISNLGK TKTITLVKSPISVPGG ALISNLGKVMSVVQTK K S P G K V 1 0 1 0 0 0 0 3 0 2 2 1 0 0 2 4 0 0 0 1 0 0 17 0 1595.8883 P51610;A6NEM2 P51610 666 682 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.010087 53.328 By MS/MS By matching 1 1 1564600 686510 878100 3062 1394 3279 6917;6918 5756 5756 1879 1 SPLGEAPPGTPPCR QPCQLCGRSPLGEAPP PPGTPPCRLCCPATAP R S P C R L 1 1 0 0 1 0 1 2 0 0 1 0 0 0 5 1 1 0 0 0 0 0 14 0 1434.6925 M0QXZ5;Q96B54 M0QXZ5 132 145 ZNF428 Zinc finger protein 428 yes no 2 0.00046388 96.756 By matching By MS/MS 1 1 2468400 1169500 1298900 3063 1060 3280 6919;6920 5757 5757 3584 1 SPLSAARAALR ________________ SAARAALRVYAVGAAV M S P L R V 4 2 0 0 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 0 0 0 11 1 1111.6462 C9JB06;Q8N5I4 C9JB06 2 12 DHRSX Dehydrogenase/reductase SDR family member on chromosome X yes no 1 0.017459 43.808 By MS/MS 1 4293600 4293600 0 3064 456 3281 6921 5758 5758 0 SPPASPESWK SVSPSSWKSPPASPES PASPESWKSGPPELRK K S P W K S 1 0 0 0 0 0 1 0 0 0 0 1 0 0 3 3 0 1 0 0 0 0 10 0 1084.5189 Q96JM3 Q96JM3 382 391 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0065277 75.229 By MS/MS By MS/MS 1 1 1856900 906440 950500 3065 1903 3282 6922;6923 5759;5760;5761 5760 2699 3 SPPLLESPDATR SDSQQAVKSPPLLESP LESPDATRESMVKLSS K S P T R E 1 1 0 1 0 0 1 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 12 0 1281.6565 Q15036 Q15036 415 426 SNX17 Sorting nexin-17 yes yes 2 0.0090417 61.423 By matching By MS/MS 1 1 1479300 729610 749670 3066 1537 3283 6924;6925 5762 5762 2120 1 SPPLPAVIR VRRPQRPRSPPLPAVI PPLPAVIRNAPSRPPS R S P I R N 1 1 0 0 0 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 9 0 948.57565 Q9Y6X9 Q9Y6X9 615 623 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 0.016442 65.157 By MS/MS By MS/MS 1 1 16488000 7332400 9155800 3067 2179 3284 6926;6927 5763;5764 5763 3169 2 SPPLSPVGTTPVK KSPSGPVKSPPLSPVG PVGTTPVKLKRAAPKE K S P V K L 0 0 0 0 0 0 0 1 0 0 1 1 0 0 4 2 2 0 0 2 0 0 13 0 1278.7184 C9J4K0;Q9BVC5 C9J4K0 147 159 C2orf49 Ashwin yes no 2 0.00027785 98 By MS/MS By MS/MS 1 1 4989300 2195500 2793700 3068 442 3285 6928;6929 5765;5766;5767;5768;5769;5770;5771 5766 636;637;3363 7 SPPPGMGLNQNR RGGLHDFRSPPPGMGL GMGLNQNRGPMGPGPG R S P N R G 0 1 2 0 0 1 0 2 0 0 1 0 1 0 3 1 0 0 0 0 0 0 12 0 1266.6139 P23246 P23246 33 44 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.0038047 72.289 By MS/MS By matching 1 1 7526300 3378200 4148200 3069 1308 3286 6930;6931 5772 5772 1719 1 SPPREGSQGELTPANSQSR ARVDSHSKSPPREGSQ TPANSQSRMSTNM___ K S P S R M 1 2 1 0 0 2 2 2 0 0 1 0 0 0 3 4 1 0 0 0 0 0 19 1 1996.9562 J3QQX0;C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098 J3QQX0 56 74 GPS1 COP9 signalosome complex subunit 1 yes no 3 0.020413 43.233 By MS/MS By matching 1 1 2062300 1574400 487960 3070 124 3287 6932;6933 5773 5773 169 1 SPPSPVER LELQSHAKSPPSPVER SPPSPVEREMVVQVER K S P E R E 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 2 0 0 0 1 0 0 8 0 867.44503 Q02952 Q02952 1328 1335 AKAP12 A-kinase anchor protein 12 yes yes 2 0.0061974 99.013 By MS/MS By MS/MS 1 1 9977200 4841400 5135800 3071 1457 3288 6934;6935 5774;5775;5776;5777;5778 5777 1952 5 SPQATRWLMQVNFVSYV APAGTRARSPQATRWL QVNFVSYV________ R S P Y V - 1 1 1 0 0 2 0 0 0 0 1 0 1 1 1 2 1 1 1 3 0 0 17 1 2025.0142 J3QSE6 J3QSE6 127 143 HSD11B1L yes yes 3 0.020243 41.378 By MS/MS 1 0 0 0 3072 1031 3289 6936 5779 5779 140 1369;3569 1 SPQETYDVYCYVDHLDGDVFHLTVPSK GVRTYGFRSPQETYDV FHLTVPSKFTFEEAAK R S P S K F 0 0 0 4 1 1 1 1 2 0 2 1 0 1 2 2 2 0 3 4 0 0 27 0 3183.4495 E9PF17;P13611;Q86W61;D6RGZ6 E9PF17 186 212 VCAN Versican core protein yes no 4 0.00090826 53.551 By MS/MS By MS/MS 1 1 8347300 4725700 3621600 3073 620 3290 6937;6938 5780;5781 5780 2 SPQPPSR EKGKPKPRSPQPPSRQ RSPQPPSRQAEPPKKE R S P S R Q 0 1 0 0 0 1 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 7 0 767.3926 E7ERS3;Q86VM9 E7ERS3 511 517 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.014446 87.639 By MS/MS By MS/MS 2 1 6893800 4466000 2427800 3074 579 3291 6939;6940;6941 5782;5783 5782 775 2 SPQQSAALPR ALEPKESRSPQQSAAL QQSAALPRRYMLRERE R S P P R R 2 1 0 0 0 2 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 10 0 1053.5567 E5RJN3;A0A0A6YYG7;Q6IBW4 E5RJN3 250 259 NCAPH2 Condensin-2 complex subunit H2 yes no 2 0.0094437 65.695 By matching By MS/MS 1 1 4575800 2042600 2533300 3075 188 3292 6942;6943 5784 5784 270 1 SPQQTVPYVVPLSPK TERQSTKRSPQQTVPY YVVPLSPKLPKTKEYA R S P P K L 0 0 0 0 0 2 0 0 0 0 1 1 0 0 4 2 1 0 1 3 0 0 15 0 1638.8981 H0Y6S1;Q9UQR0 H0Y6S1 15 29 SCML2 Sex comb on midleg-like protein 2 yes no 2;3 2.1958E-07 104.26 By MS/MS By MS/MS 1 3 7347600 1090000 6257600 3076 839 3293;3294 6944;6945;6946;6947 5785;5786;5787;5788;5789 5788 1131;1132 5 SPQTLAPVGEDAMKTPSPAAEDAREPEAK GLTLKEERSPQTLAPV DAREPEAKGNS_____ R S P A K G 6 1 0 2 0 1 4 1 0 0 1 2 1 0 5 2 2 0 0 1 0 0 29 2 2992.4448 Q92797 Q92797 1243 1271 SYMPK Symplekin yes yes 3 0.0014261 50.986 By MS/MS By matching 1 1 5428300 3830900 1597400 3077 1862 3295 6948;6949 5790 5790 268 2633;3875 1 SPRSPQLSDFGLER ASSCISEKSPRSPQLS LSDFGLERYIVSQVLP K S P E R Y 0 2 0 1 0 1 1 1 0 0 2 0 0 1 2 3 0 0 0 0 0 0 14 1 1587.8005 Q8IX90 Q8IX90 152 165 SKA3 Spindle and kinetochore-associated protein 3 yes yes 3 0.0028021 64.675 By MS/MS 1 1267400 0 1267400 3078 1756 3296 6950 5791 5791 2472 1 SPSDLHISPLAK PGSSLEARSPSDLHIS LHISPLAKKLPPPPGS R S P A K K 1 0 0 1 0 0 0 0 1 1 2 1 0 0 2 3 0 0 0 0 0 0 12 0 1263.6823 B9EGQ5;M0QXA7;O95785 B9EGQ5 308 319 WIZ Protein Wiz yes no 2 0.00049197 99.669 By MS/MS By matching 2 2 10856000 5115100 5740900 3079 423 3297 6951;6952;6953;6954 5792;5793 5793 597;598;599 2 SPSDSGYSYETIGK EKIERTTKSPSDSGYS YSYETIGKTTKTPEDG K S P G K T 0 0 0 1 0 0 1 2 0 1 0 1 0 0 1 4 1 0 2 0 0 0 14 0 1489.6573 P46821 P46821 1915 1928 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.00033149 90.05 By MS/MS By MS/MS 2 2 16061000 7439800 8621400 3080 1367 3298;3299 6955;6956;6957;6958 5794;5795;5796 5796 1809;3692;4299 3 SPSDSSTASTPVAEQIER APTPIPTRSPSDSSTA PVAEQIERALDEVTSS R S P E R A 2 1 0 1 0 1 2 0 0 1 0 0 0 0 2 5 2 0 0 1 0 0 18 0 1860.8701 Q16643;D6R9Q9 Q16643 337 354 DBN1 Drebrin yes no 2 0.0040116 62.924 By MS/MS By MS/MS 1 1 3326700 1876900 1449900 3081 1574 3300 6959;6960 5797;5798 5798 2176;2177;2178;3773 2 SPSESFIGR PDEPLLQKSPSESFIG PSESFIGREKRSNSQS K S P G R E 0 1 0 0 0 0 1 1 0 1 0 0 0 1 1 3 0 0 0 0 0 0 9 0 978.47706 Q15139;F8WBA3 Q15139 235 243 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase yes no 2 0.014205 67.207 By MS/MS By matching 1 1 3054700 1646700 1408000 3082 1545 3301 6961;6962 5799 5799 2134 1 SPSFASEWDEIEK IGKKRLEKSPSFASEW SEWDEIEKIMSSIGEG K S P E K I 1 0 0 1 0 0 3 0 0 1 0 1 0 1 1 3 0 1 0 0 0 0 13 0 1523.678 Q92625 Q92625 661 673 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2 0.00089384 74.853 By MS/MS By MS/MS 1 1 3943300 1552500 2390800 3083 1855 3302 6963;6964 5800;5801 5800 2618 2 SPSFGGASEASAR GFEPQMVKSPSFGGAS GASEASARTPPQVVQP K S P A R T 3 1 0 0 0 0 1 2 0 0 0 0 0 1 1 4 0 0 0 0 0 0 13 0 1222.5578 H7C2F7;Q8WVT3 H7C2F7 15 27 TRAPPC12 Trafficking protein particle complex subunit 12 yes no 2 0.00049709 79.639 By matching By MS/MS 1 1 3251600 1624200 1627400 3084 959 3303 6965;6966 5802 5802 1289 1 SPSGGAAGPLLTPSQSLDGSR PTLELASRSPSGGAAG SQSLDGSRRSGYITIG R S P S R R 2 1 0 1 0 1 0 4 0 0 3 0 0 0 3 5 1 0 0 0 0 0 21 0 1953.9756 Q96CX2 Q96CX2 185 205 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 2 0.0058458 58.073 By MS/MS 1 1948800 0 1948800 3085 1882 3304 6967 5803 5803 2652;2653;3880 1 SPSGGAAGPLLTPSQSLDGSRR PTLELASRSPSGGAAG QSLDGSRRSGYITIGY R S P R R S 2 2 0 1 0 1 0 4 0 0 3 0 0 0 3 5 1 0 0 0 0 0 22 1 2110.0767 Q96CX2 Q96CX2 185 206 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 3 0.00071661 62.916 By MS/MS By MS/MS 2 2 11812000 5842400 5970100 3086 1882 3305;3306 6968;6969;6970;6971 5804;5805;5806 5804 2652;2653;3880 3 SPSGHPHVR NQRGRSPRSPSGHPHV PSGHPHVRRPRSRSRD R S P V R R 0 1 0 0 0 0 0 1 2 0 0 0 0 0 2 2 0 0 0 1 0 0 9 0 972.48896 Q8WX93 Q8WX93 1104 1112 PALLD Palladin yes yes 3 0.014281 57.59 By MS/MS By MS/MS 1 1 1043400 482970 560480 3087 1841 3307 6972;6973 5807;5808 5808 2592 2 SPSGSAFGSQENLR TIASPPERSPSGSAFG FGSQENLRWRKDMTHW R S P L R W 1 1 1 0 0 1 1 2 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1435.6692 Q96N67;A0A1B0GWE0 Q96N67 1430 1443 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 1.0495E-145 195.94 By MS/MS By MS/MS 1 2 32761000 12553000 20208000 3088 1911 3308 6974;6975;6976 5809;5810;5811 5809 2707;2708 3 SPSLNLLQNK PEILVVSRSPSLNLLQ SLNLLQNKSM______ R S P N K S 0 0 2 0 0 1 0 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 0 1112.619 O43353 O43353 529 538 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 2 0.0020602 101.3 By MS/MS By MS/MS 1 1 2399300 1267400 1131900 3089 1121 3309 6977;6978 5812;5813;5814 5814 1493 3 SPSLSPSPPSPLEK SEKVSPSKSPSLSPSP SPPSPLEKTPLGERSV K S P E K T 0 0 0 0 0 0 1 0 0 0 2 1 0 0 5 5 0 0 0 0 0 0 14 0 1421.7402 P46821 P46821 1256 1269 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.7852E-89 177.39 By MS/MS By MS/MS 1 2 11763000 4849400 6913300 3090 1367 3310 6979;6980;6981 5815;5816;5817;5818 5818 1810 4 SPSLSPSPPSPLEKTPLGER SEKVSPSKSPSLSPSP EKTPLGERSVNFSLTP K S P E R S 0 1 0 0 0 0 2 1 0 0 3 1 0 0 6 5 1 0 0 0 0 0 20 1 2075.0899 P46821 P46821 1256 1275 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.0025505 81.665 By MS/MS 1 1565700 1565700 0 3091 1367 3311 6982 5819 5819 1810 1 SPSPAHLPDDPK AVSATYERSPSPAHLP AHLPDDPKVAEKQRET R S P P K V 1 0 0 2 0 0 0 0 1 0 1 1 0 0 4 2 0 0 0 0 0 0 12 0 1259.6146 H0Y4V9;Q92615;A0A087X183;H0Y641 H0Y4V9 165 176 LARP4B La-related protein 4B yes no 2 0.013 58.781 By MS/MS By matching 1 1 6200500 2963300 3237300 3092 827 3312 6983;6984 5820 5820 1110 1 SPSPGLFR FPTAGGFRSPSPGLFR SPSPGLFRASLVSSAS R S P F R A 0 1 0 0 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 0 0 8 0 859.4552 E7ESG2;Q9HAW4 E7ESG2 755 762 CLSPN Claspin yes no 2 0.019317 76.17 By MS/MS By MS/MS 2 1 3247300 1974500 1272700 3093 583 3313 6985;6986;6987 5821;5822;5823 5823 779 3 SPSPPTQHTGQPPGQPSAPSQLSAPR LSPKPPTRSPSPPTQH PSQLSAPRRYSSSLSP R S P P R R 2 1 0 0 0 4 0 2 1 0 1 0 0 0 8 5 2 0 0 0 0 0 26 0 2606.2837 I3L460;Q68EM7 I3L460 42 67 ARHGAP17 Rho GTPase-activating protein 17 yes no 3 1.2302E-05 65.779 By MS/MS By MS/MS 1 1 14571000 7452900 7118100 3094 992 3314 6988;6989 5824;5825 5825 1328 2 SPSPSPTSPGSLR LSTPRSGKSPSPSPTS PTSPGSLRKQRDLYRP K S P L R K 0 1 0 0 0 0 0 1 0 0 1 0 0 0 4 5 1 0 0 0 0 0 13 0 1268.6361 Q5VZY9;O15075 Q5VZY9 330 342 DCLK1 Serine/threonine-protein kinase DCLK1 yes no 2 0.0087573 71.03 By MS/MS By MS/MS 1 1 1762500 752930 1009600 3095 1102 3315 6990;6991 5826;5827 5826 1470;3598 2 SPSSCNDLYATVK SIQGDPQRSPSSCNDL NDLYATVKDFEKTPNS R S P V K D 1 0 1 1 1 0 0 0 0 0 1 1 0 0 1 3 1 0 1 1 0 0 13 0 1440.6555 Q9NWQ8 Q9NWQ8 351 363 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 0.00019162 80.916 By MS/MS By MS/MS 1 1 9828600 4582400 5246200 3096 2065 3316 6992;6993 5828;5829 5828 4446 2 SPSSLLIANLHLQ VLSEWSGRSPSSLLIA LIANLHLQ________ R S P L Q - 1 0 1 0 0 1 0 0 1 1 4 0 0 0 1 3 0 0 0 0 0 0 13 0 1391.7773 Q658Y4 Q658Y4 826 838 FAM91A1 Protein FAM91A1 yes yes 2 0.017592 42.209 By MS/MS 1 0 0 0 3097 1661 3317 6994 5830 5830 225 2321;2322 1 SPSSVTGNALWK TYVKENARSPSSVTGN VTGNALWKAMEKSSLT R S P W K A 1 0 1 0 0 0 0 1 0 0 1 1 0 0 1 3 1 1 0 1 0 0 12 0 1245.6354 Q9NYB0 Q9NYB0 154 165 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 2 0.0046288 70.563 By MS/MS By matching 1 1 1981100 1050700 930330 3098 2071 3318 6995;6996 5831 5831 2960 1 SPSVPKSPTPK AMATSPQKSPSVPKSP VPKSPTPKSPPSRKKD K S P P K S 0 0 0 0 0 0 0 0 0 0 0 2 0 0 4 3 1 0 0 1 0 0 11 1 1123.6237 J3KNQ4;Q9NVD7 J3KNQ4 48 58 PARVA Alpha-parvin yes no 2 0.020829 64.841 By matching By MS/MS 1 1 2660800 1068100 1592700 3099 999 3319 6997;6998 5832 5832 1335 1 SPSVPKSPTPKSPPSR AMATSPQKSPSVPKSP TPKSPPSRKKDDSFLG K S P S R K 0 1 0 0 0 0 0 0 0 0 0 2 0 0 6 5 1 0 0 1 0 0 16 2 1647.8944 J3KNQ4;Q9NVD7 J3KNQ4 48 63 PARVA Alpha-parvin yes no 3 0.0046851 65.472 By MS/MS By MS/MS 2 1 2884800 1167500 1717400 3100 999 3320 6999;7000;7001 5833;5834 5834 1335;1336 2 SPTAPSVFSPTGNR IPKQAPFRSPTAPSVF VFSPTGNRTPIPPSRT R S P N R T 1 1 1 0 0 0 0 1 0 0 0 0 0 1 3 3 2 0 0 1 0 0 14 0 1416.6997 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 229 242 NELFA Negative elongation factor A yes no 2 0.00072875 83.869 By matching By MS/MS 1 1 3363000 1776300 1586600 3101 199 3321 7002;7003 5835 5835 288;289 0 SPVPSPGSSSPQLQVK PLLLVGDRSPVPSPGS SSPQLQVKSSCKENPF R S P V K S 0 0 0 0 0 2 0 1 0 0 1 1 0 0 4 5 0 0 0 2 0 0 16 0 1593.8362 Q8N3F8 Q8N3F8 612 627 MICALL1 MICAL-like protein 1 yes yes 2 7.954E-05 93.839 By MS/MS By MS/MS 1 1 10887000 5563000 5324300 3102 1774 3322 7004;7005 5836;5837;5838;5839 5839 2492;2493;2494 4 SPVSTRPLPSASQK APAAVGRRSPVSTRPL PLPSASQKAGENQEHR R S P Q K A 1 1 0 0 0 1 0 0 0 0 1 1 0 0 3 4 1 0 0 1 0 0 14 1 1453.7889 Q8ND56 Q8ND56 216 229 LSM14A Protein LSM14 homolog A yes yes 2 7.8053E-106 184.01 By MS/MS By MS/MS 1 1 157860000 78373000 79487000 3103 1795 3323 7006;7007 5840;5841 5841 2521 2 SPVVSGDTSPR HGAEIVYKSPVVSGDT VSGDTSPRHLSNVSST K S P P R H 0 1 0 1 0 0 0 1 0 0 0 0 0 0 2 3 1 0 0 2 0 0 11 0 1100.5462 I3L170;A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636 I3L170 296 306 MAPT Microtubule-associated protein;Microtubule-associated protein tau yes no 2 0.00044866 110.31 By MS/MS By MS/MS 1 1 3959100 2167900 1791200 3104 246 3324 7008;7009 5842;5843 5843 360;3304 2 SQADMLLRHMLIMSK S Q S K 1 1 0 1 0 1 0 0 1 1 3 1 3 0 0 2 0 0 0 0 0 0 15 1 1772.91 REV__A0A1B0GTU0 yes yes 3 0.022465 45.825 By MS/MS 1 253560 253560 0 + 3105 2188 3325 7010 5844 5844 317;318 3175 0 SQAKPGTPGGTGGPAPQY LASVQHMKSQAKPGTP TGGPAPQY________ K S Q Q Y - 2 0 0 0 0 2 0 5 0 0 0 1 0 0 4 1 2 0 1 0 0 0 18 1 1669.806 Q96L35;P54760 Q96L35 918 935 EPHB4 Receptor protein-tyrosine kinase;Ephrin type-B receptor 4 yes no 2 0.003476 67.118 By MS/MS By matching 1 1 6655300 3216700 3438600 3106 1410 3326 7011;7012 5845 5845 4320 1 SQAVQTNGTQPLSK ________________ NGTQPLSKTWELSLYE M S Q S K T 1 0 1 0 0 3 0 1 0 0 1 1 0 0 1 2 2 0 0 1 0 0 14 0 1457.7474 X6RFN3;Q99496 X6RFN3 2 15 RNF2 E3 ubiquitin-protein ligase RING2 yes no 2 0.00325 57.348 By MS/MS By matching 1 1 1081200 402480 678740 3107 1937 3327 7013;7014 5846 5846 275;443;444 2744;3902;3903 1 SQDADSPGSSGAPENLTFK DAKEKRSKSQDADSPG APENLTFKERQRLFSQ K S Q F K E 2 0 1 2 0 1 1 2 0 0 1 1 0 1 2 4 1 0 0 0 0 0 19 0 1906.8545 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y8U8;H0Y948 A8MQ02 1731 1749 MLLT4 Afadin yes no 2 0.0084573 54.276 By matching By MS/MS 1 1 4078200 1971700 2106500 3108 338 3328 7015;7016 5847 5847 480 1 SQDATFSPGSEQAEKSPGPIVSR SPRRMMTRSQDATFSP SPGPIVSRTRSWDSSS R S Q S R T 2 1 0 1 0 2 2 2 0 1 0 1 0 1 3 5 1 0 0 1 0 0 23 1 2374.1401 C9J0I9;Q86WB0 C9J0I9 286 308 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 1.13E-73 143.63 By MS/MS By MS/MS 2 2 115190000 57263000 57925000 3109 432 3329;3330 7017;7018;7019;7020 5848;5849 5849 619;620 2 SQDSYPGSPSLSPR SLSSRSPKSQDSYPGS GSPSLSPRHGPSSSHM K S Q P R H 0 1 0 1 0 1 0 1 0 0 1 0 0 0 3 5 0 0 1 0 0 0 14 0 1476.6845 A0A0D9SEU5;R4GMX8;Q6VN20 A0A0D9SEU5 358 371 RANBP10 Ran-binding protein 10 yes no 2 0.0079862 58.32 By MS/MS By MS/MS 2 2 5881900 2971200 2910700 3110 224 3331;3332 7021;7022;7023;7024 5850;5851;5852 5851 321;322;323;4036 3 SQDVAVSPQQQQCSK IPKRTDVKSQDVAVSP PQQQQCSKSYVDRHME K S Q S K S 1 0 0 1 1 5 0 0 0 0 0 1 0 0 1 3 0 0 0 2 0 0 15 0 1688.7788 H3BQ37;H3BPW9;Q96F86;H3BTD6 H3BQ37 125 139 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2 2.4633E-249 223.15 By MS/MS By MS/MS 1 1 17166000 8652200 8514100 3111 916 3333 7025;7026 5853;5854 5854 1228 2 SQEADVQDWEFR PAQLGTQRSQEADVQD DVQDWEFRKRDSQGTY R S Q F R K 1 1 0 2 0 2 2 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 12 0 1508.6532 Q9C0C2 Q9C0C2 836 847 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0012945 92.939 By MS/MS By matching 1 1 12257000 5680300 6576300 3112 1985 3334 7027;7028 5855 5855 2829 1 SQEDEISSPVNKVR ILKRGLKRSQEDEISS SSPVNKVRRVSFADPI R S Q V R R 0 1 1 1 0 1 2 0 0 1 0 1 0 0 1 3 0 0 0 2 0 0 14 1 1586.79 Q5UIP0;H7C2B5 Q5UIP0 2189 2202 RIF1 Telomere-associated protein RIF1 yes no 3 0.0076796 54.811 By MS/MS By MS/MS 1 1 4933200 2366100 2567200 3113 1641 3335 7029;7030 5856;5857 5857 2286;2287 2 SQEELREDKAYQLER IAIQRVTRSQEELRED DKAYQLERHRIEAAMD R S Q E R H 1 2 0 1 0 2 4 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 15 2 1892.9228 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1234 1248 MLLT4 Afadin yes no 3 0.0037757 61.649 By MS/MS By MS/MS 1 1 8246000 3826600 4419400 3114 338 3336 7031;7032 5858;5859 5859 4072 2 SQGDEAGGHGEDRPEPLSPK QDAGPLERSQGDEAGG RPEPLSPKESKKRKLE R S Q P K E 1 1 0 2 0 1 3 4 1 0 1 1 0 0 3 2 0 0 0 0 0 0 20 1 2061.9352 A0A0A0MRN5;Q9NZT2 A0A0A0MRN5 309 328 OGFR Opioid growth factor receptor yes no 3 0.0027107 64.768 By MS/MS 1 10040000 10040000 0 3115 148 3337 7033 5860 5860 202 1 SQKAQGLRNK PQFPVPPKSQKAQGLR KAQGLRNKPCIGKQVN K S Q N K P 1 1 1 0 0 2 0 1 0 0 1 2 0 0 0 1 0 0 0 0 0 0 10 2 1128.6364 Q14207 Q14207 991 1000 NPAT Protein NPAT yes yes 2 0.016904 50.878 By MS/MS 1 502610 0 502610 3116 1518 3338 7034 5861 5861 2080 0 SQQQPTPVTPK YSTRRVTRSQQQPTPV QPTPVTPKKYPLRQTR R S Q P K K 0 0 0 0 0 3 0 0 0 0 0 1 0 0 3 1 2 0 0 1 0 0 11 0 1209.6354 O95251 O95251 80 90 KAT7 Histone acetyltransferase KAT7 yes yes 2 4.6753E-05 116.71 By MS/MS By MS/MS 1 1 12699000 6586100 6113000 3117 1187 3339 7035;7036 5862;5863;5864 5863 3634 3 SQRLSTASVIQAR TGMGRPPRSQRLSTAS TASVIQARYQGLVDGR R S Q A R Y 2 2 0 0 0 2 0 0 0 1 1 0 0 0 0 3 1 0 0 1 0 0 13 1 1415.7845 Q96JB3 Q96JB3 162 174 HIC2 Hypermethylated in cancer 2 protein yes yes 3 0.018787 67.646 By matching By MS/MS 1 1 782460 454120 328340 3118 1900 3340 7037;7038 5865 5865 2682;3886 1 SQRYSGAYGASVSDEELK ESSPSGSKSQRYSGAY SVSDEELKRRVAEELA K S Q L K R 2 1 0 1 0 1 2 2 0 0 1 1 0 0 0 4 0 0 2 1 0 0 18 1 1945.9017 C9JRZ6;F8WAR4;Q9NX63 C9JRZ6 46 63 CHCHD3 MICOS complex subunit MIC19 yes no 3 0.0029879 59.372 By MS/MS By MS/MS 1 1 4470100 2658100 1812000 3119 477 3341 7039;7040 5866;5867 5867 665;666 2 SQRYSGAYGASVSDEELKR ESSPSGSKSQRYSGAY VSDEELKRRVAEELAL K S Q K R R 2 2 0 1 0 1 2 2 0 0 1 1 0 0 0 4 0 0 2 1 0 0 19 2 2102.0029 C9JRZ6;F8WAR4;Q9NX63 C9JRZ6 46 64 CHCHD3 MICOS complex subunit MIC19 yes no 3 0.0035058 85.087 By MS/MS By MS/MS 1 1 4830900 2139700 2691200 3120 477 3342 7041;7042 5868;5869 5869 665;666 2 SQSESSDEVTELDLSHGKK RQRSRLLRSQSESSDE LDLSHGKKDAFVLEID R S Q K K D 0 0 0 2 0 1 3 1 1 0 2 2 0 0 0 5 1 0 0 1 0 0 19 1 2074.9655 Q86YS7 Q86YS7 657 675 C2CD5 C2 domain-containing protein 5 yes yes 3 0.0012699 75.73 By MS/MS By MS/MS 1 1 8736400 4402500 4333900 3121 1746 3343 7043;7044 5870;5871 5870 2457;2458 2 SQSIEQESQEK SDKHDRRRSQSIEQES IEQESQEKQHKNKDET R S Q E K Q 0 0 0 0 0 3 3 0 0 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1291.5892 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 416 426 PRPF38B Pre-mRNA-splicing factor 38B yes no 2 0.012366 62.338 By MS/MS By MS/MS 1 1 652190 652190 0 3122 147 3344 7045;7046 5872;5873 5872 199;200 2 SQSLPHSATVTLGGTSDPSTLSSSALSER SDAAPLQRSQSLPHSA SSSALSEREASRLDKF R S Q E R E 2 1 0 1 0 1 1 2 1 0 4 0 0 0 2 9 4 0 0 1 0 0 29 0 2872.405 F8WDP1;A0A0A0MRY0;Q8WUA7 F8WDP1 165 193 TBC1D22A TBC1 domain family member 22A yes no 3 0.00015676 59.189 By matching By MS/MS 1 1 9304000 3690400 5613600 3123 154 3345 7047;7048 5874 5874 209 1 SQSLPNSLDYTQTSDPGR KRTQRHGRSQSLPNSL TQTSDPGRHVMLLRAV R S Q G R H 0 1 1 2 0 2 0 1 0 0 2 0 0 0 2 4 2 0 1 0 0 0 18 0 1964.9076 H0YNE5;H0YLG5;Q96TC7 H0YNE5 44 61 RMDN3 Regulator of microtubule dynamics protein 3 yes no 2 0.0059015 57.496 By MS/MS 1 4597800 0 4597800 3124 895 3346 7049 5875 5875 1201 1 SQSLPTTLLSPVR KAGYPLRRSQSLPTTL TTLLSPVRVVSSVNVR R S Q V R V 0 1 0 0 0 1 0 0 0 0 3 0 0 0 2 3 2 0 0 1 0 0 13 0 1397.7878 E9PHV5;P28290;E7EUL7 E9PHV5 737 749 SSFA2 Sperm-specific antigen 2 yes no 2 0.0099343 59.864 By matching By MS/MS 1 1 5080100 2383500 2696600 3125 636 3347 7050;7051 5876 5876 866 1 SQSMDIDGVSCEK TQSQSLSRSQSMDIDG IDGVSCEKSMSQVDVD R S Q E K S 0 0 0 2 1 1 1 1 0 1 0 1 1 0 0 3 0 0 0 1 0 0 13 0 1454.6017 O95155 O95155 103 115 UBE4B Ubiquitin conjugation factor E4 B yes yes 2 7.0926E-07 112.02 By MS/MS By MS/MS 1 1 8152700 3229800 4922900 3126 1182 3348 7052;7053 5877;5878 5877 1576 2 SQSPHYFR FIRSKIYRSQSPHYFR SQSPHYFRSGRGEGPG R S Q F R S 0 1 0 0 0 1 0 0 1 0 0 0 0 1 1 2 0 0 1 0 0 0 8 0 1020.4777 Q9UKJ3 Q9UKJ3 1033 1040 GPATCH8 G patch domain-containing protein 8 yes yes 2 0.015865 79.489 By matching By MS/MS 1 1 4820200 2464500 2355800 3127 2109 3349 7054;7055 5879 5879 3021 1 SQSPINCIRPSVLGPLK TTRFTTRRSQSPINCI PSVLGPLKRKCEMETE R S Q L K R 0 1 1 0 1 1 0 1 0 2 2 1 0 0 3 3 0 0 0 1 0 0 17 1 1865.0193 Q96E09 Q96E09 187 203 FAM122A Protein FAM122A yes yes 3 0.0077242 51.265 By MS/MS 1 381190 381190 0 3128 1885 3350 7056 5880 5880 2662 1 SQSSDTEQQSPTSGGGK RSSNPPARSQSSDTEQ SPTSGGGKVAPAQPSE R S Q G K V 0 0 0 1 0 3 1 3 0 0 0 1 0 0 1 5 2 0 0 0 0 0 17 0 1679.7235 E7EX17;P23588 E7EX17 500 516 EIF4B Eukaryotic translation initiation factor 4B yes no 2 5.1884E-72 161.99 By MS/MS By MS/MS 2 1 13171000 9405900 3765400 3129 602 3351 7057;7058;7059 5881;5882;5883;5884;5885;5886 5886 826;827 6 SQSSHSYDDSTLPLIDR VNLNNASRSQSSHSYD STLPLIDRNQKSDKKP R S Q D R N 0 1 0 3 0 1 0 0 1 1 2 0 0 0 1 5 1 0 1 0 0 0 17 0 1919.8861 C9JZR2;O60716;H0YC95 C9JZR2 859 875 CTNND1 Catenin delta-1 yes no 3 2.9869E-19 114.56 By MS/MS By MS/MS 1 1 4860100 2251000 2609000 3130 495 3352 7060;7061 5887;5888 5888 4124 2 SQSTTSDVPANYK KLRVKPERSQSTTSDV SDVPANYKVIKSSSDA R S Q Y K V 1 0 1 1 0 1 0 0 0 0 0 1 0 0 1 3 2 0 1 1 0 0 13 0 1396.647 Q9NU19 Q9NU19 114 126 TBC1D22B TBC1 domain family member 22B yes yes 2 0.00053571 94.673 By MS/MS By MS/MS 1 1 4026100 1596000 2430100 3131 2055 3353 7062;7063 5889;5890 5889 2938 2 SQSVRPGADVTFICTAK TVTVEEQRSQSVRPGA VTFICTAKSKSPAYTL R S Q A K S 2 1 0 1 1 1 0 1 0 1 0 1 0 1 1 2 2 0 0 2 0 0 17 1 1835.92 P98160 P98160 1780 1796 HSPG2 Basement membrane-specific heparan sulfate proteoglycan core protein;Endorepellin;LG3 peptide yes yes 3 0.016482 43.557 By matching By MS/MS 1 1 8758000 3790800 4967200 3132 1446 3354 7064;7065 5891 5891 1929;3723;3724 0 SQSWEER GGGREMHRSQSWEERG RSQSWEERGDRRFEKP R S Q E R G 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 7 0 920.39881 I1E4Y6;Q6Y7W6;E7ESB6 I1E4Y6 158 164 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 0.016441 91.265 By MS/MS By MS/MS 2 1 8332200 4988000 3344200 3133 979 3355 7066;7067;7068 5892;5893;5894 5893 1315 3 SQTDVYNDSTNLACR QPVLPFSKSQTDVYND DSTNLACRNGHLQSES K S Q C R N 1 1 2 2 1 1 0 0 0 0 1 0 0 0 0 2 2 0 1 1 0 0 15 0 1742.753 Q9UBP0 Q9UBP0 207 221 SPAST Spastin yes yes 2 0.017597 51.286 By matching By MS/MS 1 1 1672500 768390 904090 3134 2093 3356 7069;7070 5895 5895 2999 1 SQTPPGVATPPIPK KSPGSAGRSQTPPGVA VATPPIPKITIQIPKG R S Q P K I 1 0 0 0 0 1 0 1 0 1 0 1 0 0 5 1 2 0 0 1 0 0 14 0 1388.7664 Q15648 Q15648 1049 1062 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.00058044 92.575 By MS/MS By MS/MS 2 2 12114000 5807400 6306400 3135 1562 3357;3358 7071;7072;7073;7074 5896;5897;5898 5896 3768;3769 3 SQTTTERDSDTDVEEEELPVENR QRVVLLQRSQTTTERD EELPVENREAVLKDHT R S Q N R E 0 2 1 3 0 1 6 0 0 0 1 0 0 0 1 2 4 0 0 2 0 0 23 1 2678.1791 Q14676 Q14676 445 467 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.0006349 60.79 By MS/MS By MS/MS 1 1 19801000 9337000 10464000 3136 1523 3359 7075;7076 5899;5900 5900 3753;3754;3755 2 SQVFQLESTFDLK KTRTVFSRSQVFQLES LESTFDLKRYLSSAER R S Q L K R 0 0 0 1 0 2 1 0 0 0 2 1 0 2 0 2 1 0 0 1 0 0 13 0 1540.7773 Q9NP08 Q9NP08 213 225 HMX1 Homeobox protein HMX1 yes yes 3 0.015777 46.985 By MS/MS By matching 1 1 929230 534590 394640 3137 2036 3360 7077;7078 5901 5901 2911 0 SQWESPSPTPSYR SGYGSSRRSQWESPSP PSPTPSYRDSERSHRL R S Q Y R D 0 1 0 0 0 1 1 0 0 0 0 0 0 0 3 4 1 1 1 0 0 0 13 0 1520.6896 Q92620 Q92620 228 240 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 2 0.0021166 72.898 By MS/MS By MS/MS 1 1 1815100 1000900 814190 3138 1853 3361 7079;7080 5902;5903 5902 2611;2612 2 SQYEVFR ESCLRNMKSQYEVFRS KSQYEVFRSSRLSSDA K S Q F R S 0 1 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 7 0 927.44503 H0Y8Y4;Q63HQ0 H0Y8Y4 22 28 AP1AR AP-1 complex-associated regulatory protein yes no 2 0.013168 67.032 By MS/MS By MS/MS 1 1 2322000 1153900 1168200 3139 855 3362 7081;7082 5904;5905 5905 4181 2 SRDDLYDQDDSRDFPR AYMPPRSRSRDDLYDQ DDSRDFPRSRDPHYDD R S R P R S 0 3 0 6 0 1 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 0 16 2 1998.8668 S4R3V8;Q86X29 S4R3V8 482 497 LSR Lipolysis-stimulated lipoprotein receptor yes no 3 0.019439 52.254 By matching By MS/MS 1 1 10516000 4815600 5700200 3140 1738 3363 7083;7084 5906 5906 2447 1 SREDLSAQPVQTK SSKRNLRKSREDLSAQ SAQPVQTKFPAYERVV K S R T K F 1 1 0 1 0 2 1 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 13 1 1457.7474 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 605 617 TJP1 Tight junction protein ZO-1 yes no 2;3 0.011849 63.134 By MS/MS By MS/MS 2 2 6977900 3616500 3361300 3141 100 3364 7085;7086;7087;7088 5907;5908 5907 132;133 1 SREDSPELNPPPGIEDNR PPILSTDRSREDSPEL PPGIEDNRQCALCLTY R S R N R Q 0 2 2 2 0 0 3 1 0 1 1 0 0 0 4 2 0 0 0 0 0 0 18 1 2020.945 Q03164 Q03164 1854 1871 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 0.0021533 63.869 By MS/MS By MS/MS 2 2 2457300 876320 1581000 3142 1459 3365 7089;7090;7091;7092 5909;5910 5910 1956;1957 2 SRESLNVDVVK PENMEKRRSRESLNVD SLNVDVVKYESGPDGG R S R V K Y 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 11 1 1244.6725 H0YG16;G3V5R9;H0YGB8;H0YJU9;H0YJL0;H0YJT3;G5E9S8;G3V2E7;F8W6L3;G3V3H3;E7EVH7;Q07866 H0YG16 152 162 KLC1 Kinesin light chain 1 yes no 2 0.0057879 85.287 By matching By MS/MS 1 1 7882700 3419600 4463200 3143 884 3366 7093;7094 5911 5911 1193 1 SRFTPELQPK QKVEPAGRSRFTPELQ FTPELQPKASQSRKRS R S R P K A 0 1 0 0 0 1 1 0 0 0 1 1 0 1 2 1 1 0 0 0 0 0 10 1 1201.6455 Q14676 Q14676 1797 1806 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 0.015081 77.593 By matching By MS/MS 1 1 1906700 857920 1048800 3144 1523 3367 7095;7096 5912 5912 2093 1 SRFYSGFNSRPR TTNYNSSRSRFYSGFN SGFNSRPRGRVYRSG_ R S R P R G 0 3 1 0 0 0 0 1 0 0 0 0 0 2 1 3 0 0 1 0 0 0 12 2 1472.7273 H0YJH9;B4DEH8;G3V4T2;Q86U42 H0YJH9 78 89 PABPN1 Polyadenylate-binding protein 2 yes no 2 0.021046 44.511 By MS/MS 1 0 0 0 3145 371 3368 7097 5913 5913 61 535 1 SRNFQYPQPPLKPR AYVPRKPRSRNFQYPQ PQPPLKPRGKPRFEPS R S R P R G 0 2 1 0 0 2 0 0 0 0 1 1 0 1 4 1 0 0 1 0 0 0 14 2 1726.9267 H0YK69;Q7Z5M5 H0YK69 1017 1030 TMC3 Transmembrane channel-like protein;Transmembrane channel-like protein 3 yes no 2 0.015536 40.715 By MS/MS 1 2514900 2514900 0 3146 891 3369 7098 5914 5914 131 4192 1 SRNYSNSK QTEMNKGKSRNYSNSK SRNYSNSKQKFQYSAN K S R S K Q 0 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 0 0 1 0 0 0 8 1 954.45191 C9JA44;C9JQ07;A2PYH4 C9JA44 62 69 HFM1 Probable ATP-dependent DNA helicase HFM1 yes no 1 0.013588 69.176 By MS/MS 1 1694500 1694500 0 3147 322 3370 7099 5915 5915 461;462 0 SRPTSEGSDIESTEPQK TSISKMKRSRPTSEGS IESTEPQKQCSKKKKK R S R Q K Q 0 1 0 1 0 1 3 1 0 1 0 1 0 0 2 4 2 0 0 0 0 0 17 1 1846.8545 H0YA82;Q4G0J3;D6RFF0 H0YA82 35 51 LARP7 La-related protein 7 yes no 2;3 2.2392E-139 191.93 By MS/MS By MS/MS 2 3 26092000 12161000 13931000 3148 861 3371;3372 7100;7101;7102;7103;7104 5916;5917;5918;5919;5920 5918 1158;1159;3517 5 SRPTSEGSDIESTEPQKQCSK TSISKMKRSRPTSEGS EPQKQCSKKKKKRDRV R S R S K K 0 1 0 1 1 2 3 1 0 1 0 2 0 0 2 5 2 0 0 0 0 0 21 2 2350.0707 H0YA82;Q4G0J3;D6RFF0 H0YA82 35 55 LARP7 La-related protein 7 yes no 3 0.0027427 74.029 By MS/MS By matching 2 2 10420000 5682500 4737400 3149 861 3373;3374 7105;7106;7107;7108 5921;5922 5922 1158;1159;3517 2 SRSDIDVNAAAGAK SLPGSLQRSRSDIDVN VNAAAGAKAHHAAGQS R S R A K A 4 1 1 2 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 1 1373.6899 E3W994;J3KR49;A0A0U1RQI6;E7ERI8;E7EW49;O75122;B3KR06;E7ENG2 E3W994 368 381 CLASP2 CLIP-associating protein 2 yes no 2;3 2.1183E-06 103.39 By MS/MS By MS/MS 2 2 81031000 38174000 42857000 3150 263 3375 7109;7110;7111;7112 5923;5924;5925;5926;5927 5925 380 5 SRSDIDVNAAASAK STTGSLQRSRSDIDVN VNAAASAKSKVSSSSG R S R A K S 4 1 1 2 0 0 0 0 0 1 0 1 0 0 0 3 0 0 0 1 0 0 14 1 1403.7005 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 379 392 CLASP1 CLIP-associating protein 1 yes no 2;3 0.00021533 77.357 By MS/MS By matching 2 2 64849000 34570000 30280000 3151 759 3376 7113;7114;7115;7116 5928;5929 5929 1012 2 SRSGEGEVSGLMR PHVSGVKRSRSGEGEV GEVSGLMRKVPRVSLE R S R M R K 0 2 0 0 0 0 2 3 0 0 1 0 1 0 0 3 0 0 0 1 0 0 13 1 1363.6514 Q13263;M0R0K9 Q13263 471 483 TRIM28 Transcription intermediary factor 1-beta yes no 2;3 5.6765E-06 107.63 By MS/MS By MS/MS 3 3 82577000 43965000 38612000 3152 1498 3377;3378 7117;7118;7119;7120;7121;7122 5930;5931;5932;5933;5934 5932 208 2051 5 SRSLSNSNPDISGTPTSPDDEVR PASLNLNRSRSLSNSN TSPDDEVRSIIGSKGL R S R V R S 0 2 2 3 0 0 1 1 0 1 1 0 0 0 3 6 2 0 0 1 0 0 23 1 2430.1259 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 894 916 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 0.00016546 69.088 By MS/MS By matching 1 1 4942400 3056500 1886000 3153 1911 3379 7123;7124 5935 5935 2709 1 SRSPGRPPK RGSRSRSRSRSPGRPP RSPGRPPKSARRSASA R S R P K S 0 2 0 0 0 0 0 1 0 0 0 1 0 0 3 2 0 0 0 0 0 0 9 2 980.55156 C9JXK0;Q14739 C9JXK0 84 92 LBR Lamin-B receptor yes no 3 0.015442 75.566 By MS/MS 1 3675800 0 3675800 3154 488 3380 7125 5936 5936 676;677 1 SRSPGSPVGEGTGSPPK NPEKYKAKSRSPGSPV EGTGSPPKWQIGEQEF K S R P K W 0 1 0 0 0 0 1 4 0 0 0 1 0 0 4 4 1 0 0 1 0 0 17 1 1595.7903 E7EV99;E7ENY0;P35611;A0A0A0MSR2;H0Y9H2 E7EV99 353 369 ADD1 Alpha-adducin yes no 2 0.015847 56.139 By matching By MS/MS 1 1 1874600 910200 964390 3155 568 3381 7126;7127 5937 5937 751;752 1 SRSPLAIR LLPRKRSRSRSPLAIR SRSPLAIRRRSRSRTP R S R I R R 1 2 0 0 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 8 1 898.53485 Q9UQ35 Q9UQ35 2044 2051 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.017942 123.01 By MS/MS By MS/MS 1 1 55531000 26530000 29001000 3156 2134 3382 7128;7129 5938;5939 5938 3091;3092 2 SRSPLELEPEAK VLRPRNKRSRSPLELE LELEPEAKKLCAKGSD R S R A K K 1 1 0 0 0 0 3 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 12 1 1354.7092 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 24 35 DDB2 DNA damage-binding protein 2 yes no 2;3 5.701E-133 197.06 By MS/MS By MS/MS 2 2 22073000 9260500 12813000 3157 30 3383 7130;7131;7132;7133 5940;5941;5942 5942 32 3 SRSQPCDLDAR RGLRNLPRSRSQPCDL QPCDLDARKTGVKRRH R S R A R K 1 2 0 2 1 1 0 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 11 1 1303.5939 Q9NYF3 Q9NYF3 271 281 FAM53C Protein FAM53C yes yes 2 0.021234 64.534 By matching By MS/MS 1 1 4071100 2246800 1824300 3158 2072 3384 7134;7135 5943 5943 2965 1 SRSSDIVSSVR SYPERLVRSRSSDIVS SDIVSSVRRPMSDPSW R S R V R R 0 2 0 1 0 0 0 0 0 1 0 0 0 0 0 5 0 0 0 2 0 0 11 1 1191.6208 H0Y7I9;C9IZ08;Q14C86;H0Y4E7;F8W9S7 H0Y7I9 737 747 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2;3 1.2279E-42 160.46 By MS/MS By MS/MS 2 2 114950000 52873000 62077000 3159 428 3385 7136;7137;7138;7139 5944;5945;5946;5947 5945 608;609;610 4 SRSSRNGGLPLQEQPMGQK ELSKELRRSRSSRNGG QEQPMGQKWGWHRGEP R S R Q K W 0 2 1 0 0 3 1 3 0 0 2 1 1 0 2 3 0 0 0 0 0 0 19 2 2069.0436 Q8NEE0 Q8NEE0 25 43 KLHL30-AS1 Putative uncharacterized protein KLHL30-AS1 yes yes 3 0.0012573 66.068 By MS/MS By MS/MS 1 1 15890000 7391400 8498500 3160 1801 3386 7140;7141 5948;5949 5949 253;434;435 2 SRSTTELDDYSTNKNGNNK FLPGDRNKSRSTTELD TNKNGNNKYLDQIGNM K S R N K Y 0 1 4 2 0 0 1 1 0 0 1 2 0 0 0 3 3 0 1 0 0 0 19 2 2142.9778 E9PMS6;A0A0A0MTE2;E9PMT2;F8WD26;J3KP06;Q8WWI1 E9PMS6 1013 1031 LMO7 LIM domain only protein 7 yes no 3 0.016078 47.204 By MS/MS 1 460770 460770 0 3161 178 3387 7142 5950 5950 28;29;30 252 0 SRTASLTSAASVDGNR SCMTRLSRSRTASLTS AASVDGNRSRSRTLSQ R S R N R S 3 2 1 1 0 0 0 1 0 0 1 0 0 0 0 4 2 0 0 1 0 0 16 1 1591.7914 G3V578;H0YJT9;A0A0A0MS87;Q9UN36 G3V578 241 256 NDRG2 Protein NDRG2 yes no 2 5.8054E-24 129.32 By MS/MS By MS/MS 1 1 11543000 4708700 6834700 3162 157 3388 7143;7144 5951;5952 5951 213;214;3266 2 SRTGSESSQTGTSTTSSR EETQERERSRTGSESS GTSTTSSRSKSDQDAR R S R S R S 0 2 0 0 0 1 1 2 0 0 0 0 0 0 0 7 5 0 0 0 0 0 18 1 1815.8195 E7EX17;P23588 E7EX17 418 435 EIF4B Eukaryotic translation initiation factor 4B yes no 3 0.0014568 79.416 By MS/MS By MS/MS 1 1 18477000 7651600 10826000 3163 602 3389 7145;7146 5953;5954 5954 828;829;3429 2 SRTHSTSSSLGSGESPFSR ASMTRLARSRTHSTSS SGESPFSRSVTSNQSD R S R S R S 0 2 0 0 0 0 1 2 1 0 1 0 0 1 1 8 2 0 0 0 0 0 19 1 1965.914 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 232 250 NDRG3 Protein NDRG3 yes no 3 0.0038358 57.366 By MS/MS By matching 1 1 4761900 2577800 2184000 3164 764 3390 7147;7148 5955 5955 1019;1020;1021 1 SRTPPSAPSQSR PPLLDRARSRTPPSAP PSAPSQSRMTSERAPS R S R S R M 1 2 0 0 0 1 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 12 1 1269.6426 Q9UQ35;I3L3Q8 Q9UQ35 2407 2418 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 0.0030182 74.78 By MS/MS By MS/MS 3 3 16218000 8130700 8087600 3165 2134 3391 7149;7150;7151;7152;7153;7154 5956;5957;5958;5959 5956 3093;3094;3968 3 SRTPSASNDDQQE EQLRSQIRSRTPSASN ASNDDQQE________ R S R Q E - 1 1 1 2 0 2 1 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 13 1 1433.6019 O43765 O43765 301 313 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 2 3.508E-29 148.85 By MS/MS By MS/MS 1 1 30612000 14958000 15654000 3166 1128 3392 7155;7156 5960;5961;5962;5963;5964;5965 5962 1504;1505 6 SRTSVMDRQAR YYSWKKTRSRTSVMDR SVMDRQARRLGGRKDK R S R A R R 1 3 0 1 0 1 0 0 0 0 0 0 1 0 0 2 1 0 0 1 0 0 11 2 1305.6572 Q8IZ40 Q8IZ40 181 191 RCOR2 REST corepressor 2 yes yes 2 0.017587 54.65 By MS/MS 1 0 0 0 3167 1767 3393 7157 5966 5966 2485 1 SRTSVQTEDDQLIAGQSAR ETEDFDVRSRTSVQTE LIAGQSARAIMAQLPQ R S R A R A 2 2 0 2 0 3 1 1 0 1 1 0 0 0 0 3 2 0 0 1 0 0 19 1 2061.0087 G3XAM7;P35221;A0A0A0MTJ6;A0A0A0MRI5;P26232 G3XAM7 652 670 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 yes no 3 0.0092415 76.301 By matching By MS/MS 1 1 36340000 21882000 14458000 3168 805 3394 7158;7159 5967 5967 1069;3498 1 SRVSVSPGR QQSNRTRKSRVSVSPG RVSVSPGRTSGKVTKH K S R G R T 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 3 0 0 0 2 0 0 9 1 943.51993 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 421 429 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0092091 87.667 By MS/MS By MS/MS 1 1 24304000 11803000 12501000 3169 346 3395 7160;7161 5968;5969 5968 514;515 2 SSADKIGEVSSPK KESQQHSKSSADKIGE IGEVSSPKASSKLAIM K S S P K A 1 0 0 1 0 0 1 1 0 1 0 2 0 0 1 4 0 0 0 1 0 0 13 1 1303.662 P35251 P35251 302 314 RFC1 Replication factor C subunit 1 yes yes 2 2.712E-11 129.17 By MS/MS By MS/MS 1 1 10385000 5010000 5374700 3170 1338 3396 7162;7163 5970;5971 5971 1760;1761 2 SSDQPLTVPVSPK KYQGLEIKSSDQPLTV LTVPVSPKFSTRFHC_ K S S P K F 0 0 0 1 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 0 1353.714 Q9ULW0 Q9ULW0 728 740 TPX2 Targeting protein for Xklp2 yes yes 2 4.374E-22 144.8 By MS/MS By MS/MS 1 1 60888000 31422000 29465000 3171 2123 3397 7164;7165 5972;5973;5974 5972 3045 3 SSEDLAGPLPSSVSSSSTTSSKPK LAVLGPSRSSEDLAGP STTSSKPKLKKRFSLR R S S P K L 1 0 0 1 0 0 1 1 0 0 2 2 0 0 3 10 2 0 0 1 0 0 24 1 2335.1391 Q9NRF2 Q9NRF2 125 148 SH2B1 SH2B adapter protein 1 yes yes 3 0.0037412 53.262 By matching By MS/MS 1 1 3402200 1834600 1567700 3172 2046 3398 7166;7167 5975 5975 2924;2925 1 SSELLGQAAR KQVLKGSRSSELLGQA ELLGQAARNMVLQEDA R S S A R N 2 1 0 0 0 1 1 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 10 0 1030.5407 A0A0B4J1R7;Q96B45 A0A0B4J1R7 45 54 C10orf32-ASMT;C10orf32 UPF0693 protein C10orf32 yes no 2 0.0021039 92.611 By MS/MS By MS/MS 1 1 1840400 756050 1084300 3173 191 3399 7168;7169 5976;5977 5977 272;273 2 SSEPVKETVQTTQSPTPVEK NTEWETVKSSEPVKET QSPTPVEKETVVTTQA K S S E K E 0 0 0 0 0 2 3 0 0 0 0 2 0 0 3 3 4 0 0 3 0 0 20 1 2171.0958 A0A0A0MT33;Q9UPN6 A0A0A0MT33 682 701 SCAF8 Protein SCAF8 yes no 3 0.001136 92.679 By MS/MS By MS/MS 1 1 10134000 4350600 5783700 3174 171 3400 7170;7171 5978;5979 5979 3273 2 SSERSSSTSAESHIQPVQK KEMQTTLKSSERSSST SHIQPVQKKSKNRTNC K S S Q K K 1 1 0 0 0 2 2 0 1 1 0 1 0 0 1 7 1 0 0 1 0 0 19 1 2043.9821 Q8IWA6 Q8IWA6 346 364 CCDC60 Coiled-coil domain-containing protein 60 yes yes 3 0.014555 40.515 By MS/MS 1 815320 0 815320 3175 1752 3401 7172 5980 5980 2464;2465;2466;2467 1 SSFFSDRGSGSR SRSDSRGKSSFFSDRG SDRGSGSRGRFDDRGR K S S S R G 0 2 0 1 0 0 0 2 0 0 0 0 0 2 0 5 0 0 0 0 0 0 12 1 1288.5796 A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O00571;A0A087WX09;B4DLA0;A0A0J9YYH6 A0A0D9SFB3 82 93 DDX3X ATP-dependent RNA helicase DDX3X yes no 2 0.018069 67.234 By MS/MS By matching 1 1 56969000 24127000 32843000 3176 229 3402 7173;7174 5981 5981 333 0 SSFSHYSGLK DRHSGSDRSSFSHYSG FSHYSGLKHEDKRGGS R S S L K H 0 0 0 0 0 0 0 1 1 0 1 1 0 1 0 4 0 0 1 0 0 0 10 0 1111.5298 Q8NC51 Q8NC51 202 211 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 4.6236E-05 113.66 By MS/MS By MS/MS 1 1 14237000 6921800 7314900 3177 1791 3403 7175;7176 5982;5983 5983 4396 2 SSGEIVYCGQVFEKSPLR YKLKKMKKSSGEIVYC VFEKSPLRVKNFGIWL K S S L R V 0 1 0 0 1 1 2 2 0 1 1 1 0 1 1 3 0 0 1 2 0 0 18 1 2055.0095 M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543 M0R0P7 18 35 RPL18A 60S ribosomal protein L18a yes no 3 0.0044058 54.668 By MS/MS By MS/MS 1 1 2666500 1045500 1621000 3178 1071 3404 7177;7178 5984;5985 5985 1409 2 SSGRSGSMDPSGAHPSVR DPAARMSRSSGRSGSM SGAHPSVRQTPSRQPP R S S V R Q 1 2 0 1 0 0 0 3 1 0 0 0 1 0 2 6 0 0 0 1 0 0 18 1 1770.8067 Q07666 Q07666 14 31 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 3 0.0089473 51.127 By matching By MS/MS 1 2 11494000 3256400 8237600 3179 1469 3405;3406 7179;7180;7181 5986;5987 5986 200 1978;1979 2 SSGSETEQVVDFSDR KYPLRQTRSSGSETEQ QVVDFSDRETKNTADH R S S D R E 0 1 0 2 0 1 2 1 0 0 0 0 0 1 0 4 1 0 0 2 0 0 15 0 1641.7118 O95251 O95251 99 113 KAT7 Histone acetyltransferase KAT7 yes yes 2 0.001488 71.241 By MS/MS By MS/MS 1 1 2063800 872080 1191700 3180 1187 3407 7182;7183 5988;5989;5990 5988 1582;1583;1584 3 SSGSPYGGGYGSGGGSGGYGSR KGGSFGGRSSGSPYGG GSGGYGSRRF______ R S S S R R 0 1 0 0 0 0 0 11 0 0 0 0 0 0 1 6 0 0 3 0 0 0 22 0 1909.7827 H7C1J8;P51991 H7C1J8 92 113 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 2;3 0.00084485 82.034 By MS/MS By MS/MS 2 2 272520000 120650000 151860000 3181 957 3408 7184;7185;7186;7187 5991;5992;5993 5993 1285;1286;1287 1 SSGSPYGGGYGSGGGSGGYGSRRF KGGSFGGRSSGSPYGG GGYGSRRF________ R S S R F - 0 2 0 0 0 0 0 11 0 0 0 0 0 1 1 6 0 0 3 0 0 0 24 2 2212.9522 H7C1J8;P51991 H7C1J8 92 115 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 3 0.015675 48.773 By matching By MS/MS 1 1 22449000 10533000 11916000 3182 957 3409 7188;7189 5994 5994 1285;1286;1287 1 SSHSLDYDKDRVK AIISGKQRSSHSLDYD DYDKDRVKELINLIQC R S S V K E 0 1 0 3 0 0 0 0 1 0 1 2 0 0 0 3 0 0 1 1 0 0 13 2 1548.7532 A0A087X0F1;Q9UK61 A0A087X0F1 96 108 FAM208A Protein FAM208A yes no 4 0.0171 54.343 By MS/MS By matching 1 1 1526000 543030 983000 3183 96 3410 7190;7191 5995 5995 123;124 1 SSKRGASPSR STSSKSSRSSKRGASP KRGASPSRHSISEWRM R S S S R H 1 2 0 0 0 0 0 1 0 0 0 1 0 0 1 4 0 0 0 0 0 0 10 2 1031.5472 Q9BZ72 Q9BZ72 313 322 PITPNM2 Membrane-associated phosphatidylinositol transfer protein 2 yes yes 2 0.011447 69.846 By MS/MS 1 32774000 0 32774000 3184 1981 3411 7192 5996 5996 2817;2818 1 SSKYLKYYR S S Y R 0 1 0 0 0 0 0 0 0 0 1 2 0 0 0 2 0 0 3 0 0 0 9 2 1206.6397 REV__A0A0C4DGM2 yes no 2 0.013742 40.882 By MS/MS By matching 1 1 7438300 4007700 3430600 + 3185 2186 3412 7193;7194 5997 5997 3173;3174;4471;4472 1 SSLGQSASETEEDTVSVSKK EEMETDARSSLGQSAS DTVSVSKKEKNRKRRN R S S K K E 1 0 0 1 0 1 3 1 0 0 1 2 0 0 0 6 2 0 0 2 0 0 20 1 2067.9808 E9PJ04;H0YCG1;E9PPJ0;Q13435 E9PJ04 300 319 SF3B2 Splicing factor 3B subunit 2 yes no 3 0.0017365 63.46 By matching By MS/MS 1 1 22983000 8739600 14244000 3186 642 3413 7195;7196 5998 5998 3444 1 SSLHGKAWSPRSSSLVSVR GLQTDPPRSSLHGKAW SSSLVSVRSKQISSSL R S S V R S 1 2 0 0 0 0 0 1 1 0 2 1 0 0 1 7 0 1 0 2 0 0 19 2 2040.0865 H0YDM2;O94964 H0YDM2 1011 1029 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes no 3 0.018928 43.454 By MS/MS 1 0 0 0 3187 875 3414 7197 5999 5999 1172;1173;1174;1175;1176;1177;1178 1 SSLSGDEEDELFK RPSHHSQRSSLSGDEE DEEDELFKGATLKALR R S S F K G 0 0 0 2 0 0 3 1 0 0 2 1 0 1 0 3 0 0 0 0 0 0 13 0 1454.6413 A0A0A0MT60;Q5T1M5 A0A0A0MT60 1186 1198 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 0.00058459 78.486 By MS/MS By MS/MS 2 1 6381400 3121500 3259900 3188 174 3415 7198;7199;7200 6000;6001;6002 6001 244;245;246 3 SSLYEGLEKPESR IRVVNAFRSSLYEGLE GLEKPESRSSIHNFMT R S S S R S 0 1 0 0 0 0 3 1 0 0 2 1 0 0 1 3 0 0 1 0 0 0 13 1 1493.7362 H0YHH6;A0A0U1RQU3;E7ERY9;H0Y7S3;Q01814;P20020 H0YHH6 107 119 ATP2B1;ATP2B2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2;Plasma membrane calcium-transporting ATPase 1 yes no 2;3 0.00041128 85.973 By MS/MS By MS/MS 2 2 9797000 4983800 4813300 3189 267 3416 7201;7202;7203;7204 6003;6004;6005 6003 4052 3 SSMPVIQSR EKSSDRRRSSMPVIQS SMPVIQSRDPLGFSWW R S S S R D 0 1 0 0 0 1 0 0 0 1 0 0 1 0 1 3 0 0 0 1 0 0 9 0 1003.5121 H0Y8J1;H0YAJ2;E2QRD4;Q6ZRQ5 H0Y8J1 29 37 MMS22L Protein MMS22-like yes no 2 0.015172 58.981 By MS/MS 1 531040 531040 0 3190 545 3417 7205 6006 6006 726;727 0 SSMSGLHLVK DGLALHIRSSMSGLHL MSGLHLVKQGRDRKKI R S S V K Q 0 0 0 0 0 0 0 1 1 0 2 1 1 0 0 3 0 0 0 1 0 0 10 0 1057.559 A0A0C4DGT1;Q13085 A0A0C4DGT1 77 86 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 2 0.00083571 107.34 By MS/MS By MS/MS 2 2 20588000 8928600 11659000 3191 219 3418;3419 7206;7207;7208;7209 6007;6008;6009;6010 6010 33 313 4 SSPEQPRPSTSK GKEARLARSSPEQPRP QPRPSTSKAVSPPHLD R S S S K A 0 1 0 0 0 1 1 0 0 0 0 1 0 0 3 4 1 0 0 0 0 0 12 1 1299.6419 H3BRN3;H3BVD2;H3BUJ5;H3BT57;P29590 H3BRN3 54 65 PML Protein PML yes no 2 0.0098964 71.976 By MS/MS 1 2696500 2696500 0 3192 927 3420 7210 6011 6011 1240;1241 1 SSPKSMICCNKK VSTAEQCRSSPKSMIC SMICCNKKSLYLPQEM R S S K K S 0 0 1 0 2 0 0 0 0 1 0 3 1 0 1 3 0 0 0 0 0 0 12 2 1438.6731 F8VW65;A0A0C4DGH6;A0JNW5 F8VW65 67 78 UHRF1BP1L UHRF1-binding protein 1-like yes no 3 0.012663 46.73 By MS/MS By matching 1 1 50915000 23549000 27366000 3193 212 3421 7211;7212 6012 6012 32 32 1 SSPLGQNDNSEYVPMLPGK FSLPNPFRSSPLGQND YVPMLPGKFLGRGLDK R S S G K F 0 0 2 1 0 1 1 2 0 0 2 1 1 0 3 3 0 0 1 1 0 0 19 0 2031.9572 O14654 O14654 817 835 IRS4 Insulin receptor substrate 4 yes yes 2;3 1.8815E-10 104.9 By MS/MS By MS/MS 4 3 91376000 55586000 35790000 3194 1094 3422;3423 7213;7214;7215;7216;7217;7218;7219 6013;6014;6015;6016;6017;6018 6015 133 4232 6 SSPNVANQPPSPGGK MKNRADHRSSPNVANQ QPPSPGGKSAYASGTT R S S G K S 1 0 2 0 0 1 0 2 0 0 0 1 0 0 4 3 0 0 0 1 0 0 15 0 1435.7056 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1131 1145 MLLT4 Afadin yes no 2 4.6053E-30 145.82 By MS/MS By MS/MS 3 4 27150000 13069000 14081000 3195 338 3424;3425 7220;7221;7222;7223;7224;7225;7226 6019;6020;6021;6022;6023;6024;6025;6026;6027 6020 481;482 8 SSPQLDPLRK KTQLSQGRSSPQLDPL PQLDPLRKSPTMEQAV R S S R K S 0 1 0 1 0 1 0 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 1 1139.6299 Q8ND56 Q8ND56 182 191 LSM14A Protein LSM14 homolog A yes yes 2;3 0.0019249 77.74 By MS/MS By matching 2 2 13788000 5701700 8086400 3196 1795 3426 7227;7228;7229;7230 6028;6029 6028 2522;2523 2 SSPSTIESFAK S S A K 1 0 0 0 0 0 1 0 0 1 0 1 0 1 1 4 1 0 0 0 0 0 11 0 1152.5663 REV__Q13415 yes yes 2 0.0087379 68.016 By MS/MS By MS/MS 3 3 225950000 105900000 120050000 + 3197 2206 3427;3428 7231;7232;7233;7234;7235;7236 6030;6031;6032 6031 3193 3 SSRFSGGFGAR GSSRGRSKSSRFSGGF FSGGFGARDYRQSSGA K S S A R D 1 2 0 0 0 0 0 3 0 0 0 0 0 2 0 3 0 0 0 0 0 0 11 1 1127.5472 A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O00571;A0A087WVZ1 A0A0D9SFB3 590 600 DDX3X ATP-dependent RNA helicase DDX3X yes no 2 0.019964 65.495 By matching By MS/MS 1 1 10667000 5397100 5270400 3198 229 3429 7237;7238 6033 6033 332 1 SSSADFGTFNTSQSHQTASAVSK AHFDNFPKSSSADFGT QTASAVSKVS______ K S S S K V 3 0 1 1 0 2 0 1 1 0 0 1 0 2 0 7 3 0 0 1 0 0 23 0 2344.0567 C9J2I0;B8ZZY2;P52594 C9J2I0 213 235 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 3 0.0053291 50.723 By MS/MS 1 8698700 0 8698700 3199 420 3430 7239 6034 6034 586 1 SSSDTSKSTYSLTRR TNSPDGRRSSSDTSKS STYSLTRRISSLESRR R S S R R I 0 2 0 1 0 0 0 0 0 0 1 1 0 0 0 6 3 0 1 0 0 0 15 2 1674.8173 H3BSP0;H3BMD4;H3BQZ6;H3BRH9;H3BN78;Q9BSW7 H3BSP0 33 47 SYT17 Synaptotagmin-17 yes no 2 0.014401 44.44 By MS/MS By matching 1 1 1748400 962560 785850 3200 906 3431 7240;7241 6035 6035 1214;1215;1216 1 SSSEDAESLAPR VRTGKRKRSSSEDAES DAESLAPRSKVKKIIQ R S S P R S 2 1 0 1 0 0 2 0 0 0 1 0 0 0 1 4 0 0 0 0 0 0 12 0 1247.563 H0YA82;Q4G0J3 H0YA82 79 90 LARP7 La-related protein 7 yes no 2 8.3435E-09 120.59 By MS/MS By MS/MS 1 1 20522000 9881200 10641000 3201 861 3432 7242;7243 6036;6037;6038;6039 6039 1155;1156;1157 4 SSSELNGVSTTSVVK YKPRPVKRSSSELNGV VSTTSVVKTTGSNIPM R S S V K T 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 5 2 0 0 3 0 0 15 0 1493.7573 Q99963 Q99963 263 277 SH3GL3 Endophilin-A3 yes yes 2 7.3955E-05 94.717 By MS/MS By MS/MS 4 4 30428000 15985000 14443000 3202 1949 3433;3434 7244;7245;7246;7247;7248;7249;7250;7251 6040;6041;6042;6043 6043 280 2760;2761;2762 4 SSSESYTQSFQSR ETARSHQRSSSESYTQ YTQSFQSRKPFFSWW_ R S S S R K 0 1 0 0 0 2 1 0 0 0 0 0 0 1 0 6 1 0 1 0 0 0 13 0 1492.643 Q9BTU6;E9PAM4 Q9BTU6 460 472 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes no 2 0.00059554 78.342 By MS/MS By matching 1 1 14629000 8011900 6616800 3203 1961 3435 7252;7253 6044 6044 2778 1 SSSETILSSLAGSDIVK SHRKPLKRSSSETILS LAGSDIVKGHEETCIR R S S V K G 1 0 0 1 0 0 1 1 0 2 2 1 0 0 0 6 1 0 0 1 0 0 17 0 1692.8782 Q01850 Q01850 309 325 CDR2 Cerebellar degeneration-related protein 2 yes yes 2 6.9869E-31 138.81 By MS/MS By MS/MS 1 1 9786200 5553000 4233200 3204 1453 3436 7254;7255 6045;6046 6046 1938 2 SSSFQAEVSLV RVSPGARRSSSFQAEV FQAEVSLV________ R S S L V - 1 0 0 0 0 1 1 0 0 0 1 0 0 1 0 4 0 0 0 2 0 0 11 0 1152.5663 P32241 P32241 447 457 VIPR1 Vasoactive intestinal polypeptide receptor 1 yes yes 2 0.0033696 80.165 By MS/MS 1 5398200 0 5398200 3205 1334 3437 7256 6047 6047 1753 1 SSSHEAGLQQGSLGGVYK LGSRSTLRSSSHEAGL GSLGGVYKTVVHALSK R S S Y K T 1 0 0 0 0 2 1 4 1 0 2 1 0 0 0 4 0 0 1 1 0 0 18 0 1803.8751 A0A1B0GUI1 A0A1B0GUI1 1210 1227 yes yes 3 0.02153 42.029 By MS/MS By matching 1 1 1092600 708310 384260 3206 294 3438 7257;7258 6048 6048 417;418;419 1 SSSISEEKGDSDDEKPR LSRHSPRKSSSISEEK DSDDEKPRKGERRSSR K S S P R K 0 1 0 3 0 0 3 1 0 1 0 2 0 0 1 5 0 0 0 0 0 0 17 2 1864.8286 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 148 164 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.0023968 80.303 By MS/MS By MS/MS 2 2 43622000 23367000 20255000 3207 576 3439 7259;7260;7261;7262 6049;6050;6051;6052 6049 769;770 4 SSSKTNSGK YRMLGETRSSSKTNSG SSKTNSGKSTAWLVRN R S S G K S 0 0 1 0 0 0 0 1 0 0 0 2 0 0 0 4 1 0 0 0 0 0 9 1 894.44067 E9PK41 E9PK41 54 62 SSSCA1 yes yes 2 0.012124 52.786 By MS/MS 1 0 0 0 3208 650 3440 7263 6053 6053 881;882;883;3446 1 SSSLDMNR RPQPSHSRSSSLDMNR SSSLDMNRTFTVTTGQ R S S N R T 0 1 1 1 0 0 0 0 0 0 1 0 1 0 0 3 0 0 0 0 0 0 8 0 908.40218 E9PMG1;H0YDT0;Q96D71 E9PMG1 533 540 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 2 0.0059118 99.568 By MS/MS By MS/MS 1 1 4593300 1986700 2606600 3209 668 3441 7264;7265 6054;6055;6056 6055 904 3 SSSLEGFHNHFK PRAFPSDRSSSLEGFH EGFHNHFKVKNVLTVG R S S F K V 0 0 1 0 0 0 1 1 2 0 1 1 0 2 0 3 0 0 0 0 0 0 12 0 1388.6473 B7Z3B9;Q13480 B7Z3B9 314 325 GAB1 GRB2-associated-binding protein 1 yes no 2;3 0.0034738 65.842 By matching By MS/MS 2 2 10764000 4920300 5843800 3210 406 3442 7266;7267;7268;7269 6057;6058 6057 559;560;561 2 SSSMAAGLER TENKTLPRSSSMAAGL SMAAGLER________ R S S E R - 2 1 0 0 0 0 1 1 0 0 1 0 1 0 0 3 0 0 0 0 0 0 10 0 1007.4706 I3L0Y9;I3L3C6;B4DWA1;I3L4C2;Q9UQB8 I3L0Y9 121 130 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 2 0.0058664 78.342 By matching By MS/MS 1 1 2526600 1108500 1418100 3211 383 3443 7270;7271 6059 6059 545;546 1 SSSMSSIDLVSASDDVHR FVQKPYSRSSSMSSID SASDDVHRFSSQVEEM R S S H R F 1 1 0 3 0 0 0 0 1 1 1 0 1 0 0 7 0 0 0 2 0 0 18 0 1891.8582 Q9Y5P4 Q9Y5P4 375 392 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 3 0.005767 48.053 By MS/MS By MS/MS 1 1 1553600 623930 929640 3212 2169 3444 7272;7273 6060;6061 6061 315 3150;3151;3152 2 SSSPAPADIAQTVQEDLR TAPEDAQKSSSPAPAD QTVQEDLRTFSWASVT K S S L R T 3 1 0 2 0 2 1 0 0 1 1 0 0 0 2 3 1 0 0 1 0 0 18 0 1883.9225 Q13283 Q13283 230 247 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2;3 7.6758E-05 93.851 By MS/MS By MS/MS 1 2 45114000 23393000 21721000 3213 1499 3445;3446 7274;7275;7276 6062;6063;6064 6062 2052;2053;2054 3 SSSPELVTHLK FPKSDDSKSSSPELVT PELVTHLKWDDPYYDI K S S L K W 0 0 0 0 0 0 1 0 1 0 2 1 0 0 1 3 1 0 0 1 0 0 11 0 1196.6401 E9PNR6;H0YE29;Q07960 E9PNR6 49 59 ARHGAP1 Rho GTPase-activating protein 1 yes no 2 0.0060099 69.815 By MS/MS By MS/MS 1 1 6361400 2903000 3458400 3214 672 3447 7277;7278 6065;6066 6066 908;909;910 2 SSSPVQVEEEPVR TTPIGNARSSSPVQVE QVEEEPVRLASLRKAI R S S V R L 0 1 0 0 0 1 3 0 0 0 0 0 0 0 2 3 0 0 0 3 0 0 13 0 1441.7049 Q8IZ21;A0A0J9YVR0 Q8IZ21 116 128 PHACTR4 Phosphatase and actin regulator 4 yes no 2 0.002148 72.848 By MS/MS By MS/MS 1 1 29147000 14863000 14284000 3215 1766 3448 7279;7280 6067;6068 6067 2483;2484 2 SSSSSASPSSPSSREEKESK KREQDHSRSSSSSASP SREEKESKKEREEEFK R S S S K K 1 1 0 0 0 0 3 0 0 0 0 2 0 0 2 11 0 0 0 0 0 0 20 2 2039.9243 Q9NYF8;E9PK91;H0YF63 Q9NYF8 751 770 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0034474 71.143 By matching By MS/MS 1 1 3900100 1807100 2093000 3216 2073 3449 7281;7282 6069 6069 2978 1 SSSSSSQPEHSAMLVSTAASPSLIK SHDRCLEKSSSSSSQP AASPSLIKETTTGYYK K S S I K E 3 0 0 0 0 1 1 0 1 1 2 1 1 0 2 10 1 0 0 1 0 0 25 0 2488.2115 P42166 P42166 291 315 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3 0.0016875 53.064 By MS/MS 1 2658200 2658200 0 3217 1354 3450 7283 6070 6070 178 1775 1 SSSTSDILEPFTVER NEEQPLPRSSSTSDIL LEPFTVERAKGAVPVI R S S E R A 0 1 0 1 0 0 2 0 0 1 1 0 0 1 1 4 2 0 0 1 0 0 15 0 1666.805 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 795 809 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 2 3.8402E-05 93.478 By MS/MS By MS/MS 1 1 6902800 3354500 3548200 3218 294 3451 7284;7285 6071;6072 6072 420;421;422 2 SSSVLSLEGSEK GSPRLVSRSSSVLSLE LSLEGSEKGLARHGSA R S S E K G 0 0 0 0 0 0 2 1 0 0 2 1 0 0 0 5 0 0 0 1 0 0 12 0 1221.6089 A0A0U1RR71;G3V311;A1L390 A0A0U1RR71 582 593 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.018505 55.213 By matching By MS/MS 1 1 2313300 1147100 1166200 3219 273 3452 7286;7287 6073 6073 389 1 SSSVSPSASFR QRDRDSIKSSSVSPSA VSPSASFRGAEKHRNS K S S F R G 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 6 0 0 0 1 0 0 11 0 1110.5306 Q04727;H7C4W5;H7C4P7;Q5JSY7 Q04727 204 214 TLE4 Transducin-like enhancer protein 4 yes no 2 0.016701 64.827 By MS/MS By matching 2 2 16290000 7712400 8578000 3220 1463 3453;3454 7288;7289;7290;7291 6074;6075 6075 1966;1967 2 SSSVSPSSWK SVSSASWKSSSVSPSS SVSPSSWKSPPASPES K S S W K S 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 6 0 1 0 1 0 0 10 0 1050.4982 Q96JM3 Q96JM3 372 381 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.013194 61.435 By MS/MS By MS/MS 1 1 1597400 748120 849270 3221 1903 3455 7292;7293 6076;6077 6077 2700 2 SSTDSLPGPISR ERKERLMRSSTDSLPG SLPGPISRQPLGATSG R S S S R Q 0 1 0 1 0 0 0 1 0 1 1 0 0 0 2 4 1 0 0 0 0 0 12 0 1215.6095 Q9HCD5 Q9HCD5 377 388 NCOA5 Nuclear receptor coactivator 5 yes yes 2 0.0096306 61.03 By MS/MS 1 1526100 1526100 0 3222 2028 3456 7294 6078 6078 2897;2898 1 SSTETCYSAIPK ILVESVTRSSTETCYS TCYSAIPKASSDASKV R S S P K A 1 0 0 0 1 0 1 0 0 1 0 1 0 0 1 3 2 0 1 0 0 0 12 0 1342.6075 O75369;E7EN95;A0A0A0MT44 O75369 2496 2507 FLNB Filamin-B yes no 2 0.00070418 83.869 By MS/MS By MS/MS 1 1 4468800 2565900 1902900 3223 1158 3457 7295;7296 6079;6080 6080 1544;4250 2 SSTLSSSSMSLSPK SGSELNSRSSTLSSSS SSMSLSPKLCAEKEAA R S S P K L 0 0 0 0 0 0 0 0 0 0 2 1 1 0 1 8 1 0 0 0 0 0 14 0 1397.6708 O15119 O15119 696 709 TBX3 T-box transcription factor TBX3 yes yes 2 0.00048596 75.316 By MS/MS 1 819790 819790 0 3224 1104 3458 7297 6081 6081 1473 1 SSTPLPTISSSAENTR REQGTESRSSTPLPTI SSSAENTRQNGSNDSD R S S T R Q 1 1 1 0 0 0 1 0 0 1 1 0 0 0 2 5 3 0 0 0 0 0 16 0 1646.8111 G5E972;P42167;H0YJH7;P42166 G5E972 158 173 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 2;3 2.24E-85 169.15 By MS/MS By MS/MS 3 3 143710000 69192000 74514000 3225 808;1354 3459;3460 7298;7299;7300;7301;7302;7303 6082;6083;6084;6085 6083 123 1080;1081 4 SSTPPGESYFGVSSLQLK LSLCAGVKSSTPPGES GVSSLQLKGQSQTSPD K S S L K G 0 0 0 0 0 1 1 2 0 0 2 1 0 1 2 5 1 0 1 1 0 0 18 0 1882.9313 Q9UQ35 Q9UQ35 1041 1058 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.013524 49.528 By MS/MS By MS/MS 1 1 2021100 1018500 1002600 3226 2134 3461 7304;7305 6086;6087 6087 3095;3969 2 SSTSGSWAPECR RGQQSRFRSSTSGSWA GSWAPECREEQSQSQP R S S C R E 1 1 0 0 1 0 1 1 0 0 0 0 0 0 1 4 1 1 0 0 0 0 12 0 1323.5514 A0A096LNW2;A2VEC9 A0A096LNW2 4188 4199 SSPO SCO-spondin yes no 2 0.017244 43.442 By MS/MS 1 0 0 0 3227 121 3462 7306 6088 6088 164;165;166;167 1 SSTVTEAPIAVVTSR NAPTKRPRSSTVTEAP PIAVVTSRTSEVYVWG R S S S R T 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 3 3 0 0 3 0 0 15 0 1516.8097 Q8TD19 Q8TD19 331 345 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 0.0034733 63.754 By MS/MS By matching 1 1 5672500 1939000 3733500 3228 1822 3463 7307;7308 6089 6089 2565;2566 1 SSVAGSLSLR SNSPKPARSSVAGSLS VAGSLSLRRAVDPGEN R S S L R R 1 1 0 0 0 0 0 1 0 0 2 0 0 0 0 4 0 0 0 1 0 0 10 0 975.53491 O94972 O94972 766 775 TRIM37 E3 ubiquitin-protein ligase TRIM37 yes yes 3 0.017178 50.95 By matching By MS/MS 1 1 1497300 977180 520100 3229 1179 3464 7309;7310 6090 6090 1574;1575 1 SSVLPSPSGR PPSSVPLKSSVLPSPS VLPSPSGRSAQGSSSP K S S G R S 0 1 0 0 0 0 0 1 0 0 1 0 0 0 2 4 0 0 0 1 0 0 10 0 985.51926 A0A0A0MSW3;P35658 A0A0A0MSW3 70 79 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.0095487 65.563 By MS/MS 1 1164300 0 1164300 3230 168 3465 7311 6091 6091 237 1 STAALEEDAQILK EEEYVIRKSTAALEED EEDAQILKVIEAYCTS K S T L K V 3 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 13 0 1387.7195 Q15052;E9PDQ5;B1ALK7;Q14155 Q15052 649 661 ARHGEF6;ARHGEF7 Rho guanine nucleotide exchange factor 6;Rho guanine nucleotide exchange factor 7 yes no 2 0.0085194 61.11 By MS/MS 1 610320 610320 0 3231 1539 3466 7312 6092 6092 2124;3762 1 STAGDTHLGGEDFDNR EDGIFEVKSTAGDTHL GGEDFDNRMVNHFIAE K S T N R M 1 1 1 3 0 0 1 3 1 0 1 0 0 1 0 1 2 0 0 0 0 0 16 0 1690.7183 E9PKE3;P11142;E9PN89;P54652 E9PKE3 202 217 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 0.00083414 74.89 By MS/MS By MS/MS 2 2 11754000 5318200 6435500 3232 654 3467 7313;7314;7315;7316 6093;6094 6094 2 STALLKSLSAERER AVEAKVNRSTALLKSL SLSAERERWEKTSETF R S T E R W 2 2 0 0 0 0 2 0 0 0 3 1 0 0 0 3 1 0 0 0 0 0 14 2 1559.8631 Q14204 Q14204 3475 3488 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.020529 46.89 By matching By MS/MS 1 1 3746200 2055400 1690800 3233 1517 3468 7317;7318 6095 6095 2076;3747 1 STAQQELDGKPASPTPVIVASHTANKEEK GKDFQPSRSTAQQELD HTANKEEKQPDPWPLE R S T E K Q 4 0 1 1 0 2 3 1 1 1 1 3 0 0 3 3 3 0 0 2 0 0 29 2 3032.5415 H0YAC7;P35606 H0YAC7 61 89 COPB2 Coatomer subunit beta yes no 3;4;5 2.7494E-06 77.401 By MS/MS By MS/MS 3 3 119450000 50315000 69132000 3234 862 3469 7319;7320;7321;7322;7323;7324 6096;6097;6098;6099;6100;6101 6100 1160 6 STDSSSVSGSLQQETK RSERRKRRSTDSSSVS GSLQQETKYILPTLEK R S T T K Y 0 0 0 1 0 2 1 1 0 0 1 1 0 0 0 6 2 0 0 1 0 0 16 0 1639.7537 Q9H8G2 Q9H8G2 89 104 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 2 0.0017481 71.354 By MS/MS By MS/MS 1 1 13723000 6754300 6968500 3235 2020 3470 7325;7326 6102;6103 6102 2888;3931 2 STELLIR REIRRYQKSTELLIRK KSTELLIRKLPFQRLV K S T I R K 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 7 0 830.48617 K7EMV3;K7EP01;B4DEB1;K7EK07;Q5TEC6;K7ES00;Q6NXT2;Q71DI3;Q16695;P84243;P68431 K7EMV3 58 64 H3F3B;H3F3A;HIST2H3PS2;H3F3C;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.3C;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2 2.7194E-07 144.29 By matching By MS/MS 1 1 4201500 1467200 2734300 3236 370 3471 7327;7328 6104 6104 1 STFREESPLR KNLDAREKSTFREESP FREESPLRIKMIASDS K S T L R I 0 2 0 0 0 0 2 0 0 0 1 0 0 1 1 2 1 0 0 0 0 0 10 1 1220.6149 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 525 534 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0046575 88.803 By matching By MS/MS 1 1 328740000 177460000 151280000 3237 2073 3472 7329;7330 6105 6105 2979 1 STFREESPLRIK KNLDAREKSTFREESP EESPLRIKMIASDSHR K S T I K M 0 2 0 0 0 0 2 0 0 1 1 1 0 1 1 2 1 0 0 0 0 0 12 2 1461.794 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7 Q9NYF8 525 536 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.011387 62.69 By MS/MS 1 32425000 0 32425000 3238 2073 3473 7331 6106 6106 2979 1 STGSLLTPTR FDVMKKGKSTGSLLTP GSLLTPTRGESEKQEP K S T T R G 0 1 0 0 0 0 0 1 0 0 2 0 0 0 1 2 3 0 0 0 0 0 10 0 1031.5611 Q5T5U3;A0A087WW76 Q5T5U3 1741 1750 ARHGAP21 Rho GTPase-activating protein 21 yes no 2 0.012056 62.408 By MS/MS 1 237830 0 237830 3239 1626 3474 7332 6107 6107 2264 1 STLAMSPR RIPNPHLKSTLAMSPR STLAMSPRQRKKMTRI K S T P R Q 1 1 0 0 0 0 0 0 0 0 1 0 1 0 1 2 1 0 0 0 0 0 8 0 861.43784 H0YIU4;Q13522 H0YIU4 33 40 PPP1R1A Protein phosphatase 1 regulatory subunit 1A yes no 2 0.021302 73.841 By matching By MS/MS 1 1 1082200 556160 526030 3240 886 3475 7333;7334 6108 6108 1195 1 STLTDSLVCK IAHVDHGKSTLTDSLV LTDSLVCKAGIIASAR K S T C K A 0 0 0 1 1 0 0 0 0 0 2 1 0 0 0 2 2 0 0 1 0 0 10 0 1122.5591 P13639 P13639 33 42 EEF2 Elongation factor 2 yes yes 2 0.013233 82.75 By MS/MS 1 0 0 0 3241 1269 3476 7335 6109 6109 1 STLVGHDTFTK TTEANAWKSTLVGHDT VGHDTFTKVKPSAASI K S T T K V 0 0 0 1 0 0 0 1 1 0 1 1 0 1 0 1 3 0 0 1 0 0 11 0 1204.6088 CON__Streptavidin CON__Streptavidin 123 133 yes yes 2 0.00073121 89.029 By MS/MS By MS/MS 1 1 1430700 0 1430700 + 3242 514 3477 7336;7337 6110;6111 6110 2 STMDFSTHQAVPDPK RELGGIPRSTMDFSTH HQAVPDPKELLLSGPP R S T P K E 1 0 0 2 0 1 0 0 1 0 0 1 1 1 2 2 2 0 0 1 0 0 15 0 1659.7563 E7EMZ9;E9PBC6;O95359 E7EMZ9 1206 1220 TACC2 Transforming acidic coiled-coil-containing protein 2 yes no 2 0.018864 55.176 By matching By MS/MS 1 1 11544000 5407600 6136500 3243 563 3478 7338;7339 6112 6112 746;3403 1 STNGSKQNVAIYNPSMGVSVLAPYR ITQVTWQKSTNGSKQN VSVLAPYRERVEFLRP K S T Y R E 2 1 3 0 0 1 0 2 0 1 1 1 1 0 2 4 1 0 2 3 0 0 25 1 2652.333 Q15223 Q15223 70 94 PVRL1 Nectin-1 yes yes 3 0.012836 43.956 By matching By MS/MS 1 1 2374600 879800 1494800 3244 1547 3479 7340;7341 6113 6113 213;420 220 2140;2141 1 STPGSVIAQK SSKFSKPKSTPGSVIA PGSVIAQKLEKMHPKH K S T Q K L 1 0 0 0 0 1 0 1 0 1 0 1 0 0 1 2 1 0 0 1 0 0 10 0 986.53966 J3KQU2;Q05C16 J3KQU2 161 170 LRRC63 Leucine-rich repeat-containing protein 63 yes no 2 0.0067098 73.841 By MS/MS 1 91580000 0 91580000 3245 1010 3480 7342 6114 6114 1345 1 STPSHGSVSSLNSTGSLSPK PPPKDSLRSTPSHGSV STGSLSPKHSLKQTQP R S T P K H 0 0 1 0 0 0 0 2 1 0 2 1 0 0 2 8 2 0 0 1 0 0 20 0 1928.9439 M0R2S2;M0R165;Q9UBC2 M0R2S2 84 103 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 3 0.0052226 52.754 By matching By MS/MS 1 1 2257100 924950 1332100 3246 1074 3481 7343;7344 6115 6115 1416 1 STQESLTAGGTDLKR PATRVTRRSTQESLTA AGGTDLKRELHPPATS R S T K R E 1 1 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 15 1 1562.79 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 304 318 LRRC41 Leucine-rich repeat-containing protein 41 yes no 2 0.00023278 82.349 By MS/MS By MS/MS 1 1 6902200 3423600 3478600 3247 32 3482 7345;7346 6116;6117 6116 34;35;3215 2 STRSVENLPECGITHEQR RIPENRIRSTRSVENL CGITHEQRAGSFSTVP R S T Q R A 0 2 1 0 1 1 3 1 1 1 1 0 0 0 1 2 2 0 0 1 0 0 18 1 2112.0018 A0A0B4J1S8;Q9UBF8;F8W860 A0A0B4J1S8 437 454 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 0.0012412 76.049 By MS/MS By MS/MS 1 1 8834700 4824800 4010000 3248 192 3483 7347;7348 6118;6119 6118 276;277;3286 2 STSAPQMSPGSSDNQSSSPQPAQQK PSSPLPSKSTSAPQMS SPQPAQQKLKQQKKKA K S T Q K L 2 0 1 1 0 5 0 1 0 0 0 1 1 0 4 8 1 0 0 0 0 0 25 0 2531.1194 F8W726;Q14157 F8W726 471 495 UBAP2L Ubiquitin-associated protein 2-like yes no 3 2.1626E-14 102.16 By MS/MS By MS/MS 1 2 51527000 24049000 27478000 3249 754 3484 7349;7350;7351 6120;6121 6121 1008 2 STSATDTHHVEMAR PALALRARSTSATDTH THHVEMARERSKTVTS R S T A R E 2 1 0 1 0 0 1 0 2 0 0 0 1 0 0 2 3 0 0 1 0 0 14 0 1541.6893 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874 H3BQP2 31 44 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes no 3 0.0010035 71.933 By MS/MS By MS/MS 2 2 33169000 18105000 15064000 3250 911 3485;3486 7352;7353;7354;7355 6122;6123;6124 6124 108 1219;3531 3 STSESTAALGCLVK FPLAPCSRSTSESTAA AALGCLVKDYFPEPVT R S T V K D 2 0 0 0 1 0 1 1 0 0 2 1 0 0 0 3 2 0 0 1 0 0 14 0 1422.7024 P01859;P01861 P01861 17 30 IGHG2;IGHG4 Ig gamma-2 chain C region;Ig gamma-4 chain C region no no 2 0.022323 53.08 By MS/MS 1 771790 771790 0 3251 1208;1209 3487 7356 6125 6125 1 STSGPRPGCQPSSPCVPK ATYNQLSRSTSGPRPG PSSPCVPKLSNSDSQD R S T P K L 0 1 0 0 2 1 0 2 0 0 0 1 0 0 5 4 1 0 0 1 0 0 18 1 1897.8775 O14545 O14545 468 485 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 3 0.0091679 48.883 By matching By MS/MS 1 1 6376100 3123500 3252600 3252 1092 3488 7357;7358 6126 6126 1444;1445;1446;1447;3594 1 STSQGSINSPVYSR VRDRMIHRSTSQGSIN INSPVYSRHSYTPTTS R S T S R H 0 1 1 0 0 1 0 1 0 1 0 0 0 0 1 5 1 0 1 1 0 0 14 0 1481.711 J3QSX6;F8W8M4;A0A0A0MRL6;O14639;H0Y7N6;F6XFR5 J3QSX6 108 121 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.0043565 66.262 By MS/MS By MS/MS 2 1 11833000 6186800 5645700 3253 144 3489;3490 7359;7360;7361 6127;6128 6128 192;193;3257 1 STSTPNVHMVSTTLPVDSR GSLSQRQRSTSTPNVH TTLPVDSRMIEDAIRS R S T S R M 0 1 1 1 0 0 0 0 1 0 1 0 1 0 2 4 4 0 0 3 0 0 19 0 2027.9946 H7C155;P04049 H7C155 136 154 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 3 0.0028301 62.362 By MS/MS 1 3134600 0 3134600 3254 952 3491 7362 6129 6129 1278;3540 1 STSTPTSPGPR KPLLSVNKSTSTPTSP TPTSPGPRTHSTPSIP K S T P R T 0 1 0 0 0 0 0 1 0 0 0 0 0 0 3 3 3 0 0 0 0 0 11 0 1086.5306 H3BUF6;Q8WWM7;H3BRB0;A0A0C4DGL7 H3BUF6 684 694 ATXN2L Ataxin-2-like protein yes no 2 0.0017877 91.867 By MS/MS By MS/MS 1 2 21642000 8720400 12921000 3255 935 3492 7363;7364;7365 6130;6131;6132;6133;6134 6130 1257;1258 5 STSVQLLQR VGSSGCGKSTSVQLLQ TSVQLLQRLYDPVQGQ K S T Q R L 0 1 0 0 0 2 0 0 0 0 2 0 0 0 0 2 1 0 0 1 0 0 9 0 1030.5771 H7C165;Q2M3G0 H7C165 224 232 ABCB5 ATP-binding cassette sub-family B member 5 yes no 2 0.014205 67.207 By matching By MS/MS 1 1 9989500 4267500 5722000 3256 953 3493 7366;7367 6135 6135 1279 1 STTNYVDFYSTK YSTQYGLKSTTNYVDF YVDFYSTKRPSYRAEQ K S T T K R 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 2 3 0 2 1 0 0 12 0 1424.646 A0A0D9SF60;Q99569 Q99569 1162 1173 PKP4 Plakophilin-4 no no 2 0.0034947 64.439 By MS/MS By MS/MS 2 2 5237700 2247400 2990400 3257 232;1939 3494;3495 7368;7369;7370;7371 6136;6137;6138 6137 336;4040 3 STTSVSEEDVSSR RTVSGRYKSTTSVSEE SEEDVSSRYSRTDRSG K S T S R Y 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 5 2 0 0 2 0 0 13 0 1382.6161 Q96IZ0 Q96IZ0 228 240 PAWR PRKC apoptosis WT1 regulator protein yes yes 2 0.020085 63.16 By MS/MS 1 0 0 0 3258 1898 3496 7372 6139 6139 2679 1 STVTGERQSGDGQESTEPVENKVGK GEEKPDTKSTVTGERQ PVENKVGKKGPKHLDD K S T G K K 0 1 1 1 0 2 4 4 0 0 0 2 0 0 1 3 3 0 0 3 0 0 25 2 2618.242 J3KSY7;O15234 J3KSY7 27 51 CASC3 Protein CASC3 yes no 3 0.00050548 62.442 By MS/MS By matching 1 1 8161100 5416400 2744700 3259 1022 3497 7373;7374 6140 6140 1360 1 STWPLPSATQRR GSTSGLLRSTWPLPSA LPSATQRRASCSPPS_ R S T R R A 1 2 0 0 0 1 0 0 0 0 1 0 0 0 2 2 2 1 0 0 0 0 12 1 1398.7368 E9PNH4 E9PNH4 84 95 FAM86B1 yes yes 2 0.013555 48.794 By MS/MS 1 0 0 0 3260 670 3498 7375 6141 6141 906;3450;3451 1 STYTSYPK ________________ STYTSYPKAEPMPSAS K S T P K A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 2 2 0 2 0 0 0 8 0 945.44436 I3L1E3;O14964 I3L1E3 4 11 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 2 0.0039239 108.09 By MS/MS By MS/MS 2 2 4157400 1943100 2214300 3261 982 3499 7376;7377;7378;7379 6142;6143;6144 6144 4208 3 SVAAEGALLPQTPPSPR ASPQSGRKSVAAEGAL PQTPPSPRNLIPHGHR K S V P R N 3 1 0 0 0 1 1 1 0 0 2 0 0 0 4 2 1 0 0 1 0 0 17 0 1689.905 Q86X27;H7C2H2 Q86X27 315 331 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes no 2 0.013102 59.502 By matching By MS/MS 1 1 2665400 1373500 1291800 3262 1737 3500 7380;7381 6145 6145 3844 1 SVAAFTADPLSLLRNV GSENEMRRSVAAFTAD PLSLLRNV________ R S V N V - 3 1 1 1 0 0 0 0 0 0 3 0 0 1 1 2 1 0 0 2 0 0 16 1 1672.9148 A0A0A0MSJ2;E7EU13;Q96P48 A0A0A0MSJ2 664 679 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes no 3 0.019192 41.521 By MS/MS By matching 1 1 2095800 1025900 1069800 3263 162 3501 7382;7383 6146 6146 25 219;220;3267 0 SVASNQSEMEFSSLQDMPK KLEDSEVRSVASNQSE SSLQDMPKELDPSAVL R S V P K E 1 0 1 1 0 2 2 0 0 0 1 1 2 1 1 5 0 0 0 1 0 0 19 0 2113.9296 A0A087X2B6;G3V119;H0YB24;Q8N163 A0A087X2B6 138 156 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 2 0.0023193 73.279 By MS/MS 1 2474100 0 2474100 3264 113 3502 7384 6147 6147 148 1 SVAVSDEEEVEEEAER PATPSRKRSVAVSDEE EVEEEAERRKERCKRG R S V E R R 2 1 0 1 0 0 7 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 16 0 1805.7803 Q9Y6X9 Q9Y6X9 739 754 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 2.4226E-06 99.566 By MS/MS By MS/MS 1 1 4781700 2180600 2601100 3265 2179 3503 7385;7386 6148;6149 6149 3167;3168 2 SVAVSDEEEVEEEAERR PATPSRKRSVAVSDEE VEEEAERRKERCKRGR R S V R R K 2 2 0 1 0 0 7 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 17 1 1961.8814 Q9Y6X9 Q9Y6X9 739 755 MORC2 MORC family CW-type zinc finger protein 2 yes yes 3 0.0022447 55.213 By matching By MS/MS 1 1 2865200 911290 1953900 3266 2179 3504 7387;7388 6150 6150 3167;3168 1 SVDAIGGESMPIPTIDTSR TAEERKRKSVDAIGGE IPTIDTSRKKRLPSKE K S V S R K 1 1 0 2 0 0 1 2 0 3 0 0 1 0 2 3 2 0 0 1 0 0 19 0 1944.9463 Q9BWT3 Q9BWT3 684 702 PAPOLG Poly(A) polymerase gamma yes yes 2 0.012855 50.653 By MS/MS By matching 1 1 563800 421180 142620 3267 1969 3505 7389;7390 6151 6151 2792 1 SVDAYDSYWESR PRVTKPSRSVDAYDSY YDSYWESRKPPLKASL R S V S R K 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 3 0 1 2 1 0 0 12 0 1476.6157 Q9UM82 Q9UM82 253 264 SPATA2 Spermatogenesis-associated protein 2 yes yes 2 4.3783E-15 137.95 By MS/MS 1 2964500 0 2964500 3268 2126 3506 7391 6152 6152 3050 1 SVDISLGDSPR VKPPDQRRSVDISLGD ISLGDSPRRARGHAVK R S V P R R 0 1 0 2 0 0 0 1 0 1 1 0 0 0 1 3 0 0 0 1 0 0 11 0 1144.5724 H0YDE2;A0A1B0GTN9;E9PKC0;Q6IQ23 H0YDE2 235 245 PLEKHA7 Pleckstrin homology domain-containing family A member 7 yes no 2 0.0074806 66.435 By MS/MS By MS/MS 1 1 720310 311870 408440 3269 287 3507 7392;7393 6153;6154 6154 408 2 SVENLPECGITHEQR ENRIRSTRSVENLPEC CGITHEQRAGSFSTVP R S V Q R A 0 1 1 0 1 1 3 1 1 1 1 0 0 0 1 1 1 0 0 1 0 0 15 0 1767.821 A0A0B4J1S8;Q9UBF8;F8W860 A0A0B4J1S8 440 454 PI4KB Phosphatidylinositol 4-kinase beta yes no 2;3 3.0923E-15 122.08 By MS/MS By MS/MS 2 2 51797000 20978000 30819000 3270 192 3508 7394;7395;7396;7397 6155;6156;6157;6158 6156 277 4 SVFWASSPYR PPPAGNPRSVFWASSP FWASSPYRRRANNNAA R S V Y R R 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 3 0 1 1 1 0 0 10 0 1198.5771 F1T0I1;J3KNL6 F1T0I1 23 32 SEC16A yes no 2 0.020311 57.019 By matching By MS/MS 1 1 442990 247480 195510 3271 685 3509 7398;7399 6159 6159 921;922 1 SVICDISPLR GGSLSERRSVICDISP ICDISPLRQIVRDPGA R S V L R Q 0 1 0 1 1 0 0 0 0 2 1 0 0 0 1 2 0 0 0 1 0 0 10 0 1158.6067 Q9UGU0 Q9UGU0 865 874 TCF20 Transcription factor 20 yes yes 2 0.0018196 88.155 By MS/MS By matching 1 1 1283300 666890 616440 3272 2096 3510 7400;7401 6160 6160 3002 1 SVIEPLPVTPTR HTKSVYTRSVIEPLPV PLPVTPTRDVATSPIS R S V T R D 0 1 0 0 0 0 1 0 0 1 1 0 0 0 3 1 2 0 0 2 0 0 12 0 1307.7449 H0YCM0;E9PM17;B3KNX7;Q13153 H0YCM0 95 106 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 2 0.003552 94.688 By matching By MS/MS 1 1 1850800 850350 1000500 3273 366 3511 7402;7403 6161 6161 3336 1 SVIVNKTSNTR HNVDQSGKSVIVNKTS VNKTSNTRIPDQKFNE K S V T R I 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 2 2 0 0 2 0 0 11 1 1217.6728 Q15032;H7C2F9 Q15032 222 232 R3HDM1 R3H domain-containing protein 1 yes no 2 0.012922 55.105 By MS/MS By MS/MS 1 1 1435900 792650 643270 3274 1536 3512 7404;7405 6162;6163 6163 212 2118;2119;3761 0 SVKEDSNLTLQEK PDKMKKSKSVKEDSNL SNLTLQEKKEKIQTGL K S V E K K 0 0 1 1 0 1 2 0 0 0 2 2 0 0 0 2 1 0 0 1 0 0 13 1 1489.7624 P46940;H0YLE8 P46940 1443 1455 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 3.1838E-06 110.44 By MS/MS 1 7692400 0 7692400 3275 1370 3513 7406 6164 6164 1816 1 SVKTSPTTQSK SNSSPIGKSVKTSPTT TSPTTQSKHNTTSAKG K S V S K H 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 3 3 0 0 1 0 0 11 1 1162.6194 Q5UIP0;H7C2B5 Q5UIP0 2239 2249 RIF1 Telomere-associated protein RIF1 yes no 2;3 0.0080708 80.871 By MS/MS By MS/MS 2 1 2118400 1196800 921580 3276 1641 3514;3515 7407;7408;7409 6165;6166 6166 2288 2 SVLGQLGITK ITGTYDLKSVLGQLGI LGQLGITKVFSNGADL K S V T K V 0 0 0 0 0 1 0 2 0 1 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1014.6073 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 325 334 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.0038967 85.731 By matching By MS/MS 1 1 2782900 1676200 1106700 3277 1 3516 7410;7411 6167 6167 1 SVNEILGLAESSPNEPK DLEKDIEKSVNEILGL ESSPNEPKAATLAVPP K S V P K A 1 0 2 0 0 0 3 1 0 1 2 1 0 0 2 3 0 0 0 1 0 0 17 0 1782.9 Q9H8G2 Q9H8G2 301 317 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 2 0.0032049 62.709 By MS/MS By matching 1 1 4495200 2191900 2303300 3278 2020 3517 7412;7413 6168 6168 2889;2890 1 SVNGGPGSPDLAR SPSMGRYRSVNGGPGS PGSPDLARHYKSSSPL R S V A R H 1 1 1 1 0 0 0 3 0 0 1 0 0 0 2 2 0 0 0 1 0 0 13 0 1225.6051 A0A087X2C4;H0YAH0;O60245 A0A087X2C4 297 309 PCDH7 Protocadherin-7 yes no 2 0.00038401 81.128 By MS/MS By MS/MS 1 1 6646200 3329800 3316400 3279 114 3518 7414;7415 6169;6170 6170 149 2 SVPGTTSSPLVGDISPK SVSQDFSRSVPGTTSS LVGDISPKSSPHEVKF R S V P K S 0 0 0 1 0 0 0 2 0 1 1 1 0 0 3 4 2 0 0 2 0 0 17 0 1640.8621 H0Y6S1;Q9UQR0 H0Y6S1 92 108 SCML2 Sex comb on midleg-like protein 2 yes no 2 2.9168E-06 99.752 By matching By MS/MS 1 1 14741000 7011700 7729100 3280 839 3519 7416;7417 6171 6171 1133 1 SVQEGENPDDGVR MSKRKRKRSVQEGENP ENPDDGVRGSPPEDYR R S V V R G 0 1 1 2 0 1 2 2 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 0 1400.6168 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 17 29 RBM34 RNA-binding protein 34 yes no 2 7.0926E-07 112.02 By MS/MS By MS/MS 1 1 10037000 5170200 4866600 3281 316 3520 7418;7419 6172;6173 6172 452 2 SVRERESHSR AQCLTTCRSVRERESH RERESHSRKSASSCDV R S V S R K 0 3 0 0 0 0 2 0 1 0 0 0 0 0 0 3 0 0 0 1 0 0 10 2 1241.6225 O75140 O75140 483 492 DEPDC5 DEP domain-containing protein 5 yes yes 1 0.021995 40.377 By MS/MS 1 3084900 3084900 0 3282 1153 3521 7420 6174 6174 1538 0 SVSEINSDDELSGK SVQSLDSRSVSEINSD SDDELSGKGYALVPII R S V G K G 0 0 1 2 0 0 2 1 0 1 1 1 0 0 0 4 0 0 0 1 0 0 14 0 1478.6736 F8WF45;P82094 F8WF45 338 351 TMF1 TATA element modulatory factor yes no 2 1.5185E-12 114.63 By MS/MS By matching 1 1 13329000 6268900 7059800 3283 774 3522 7421;7422 6175 6175 1033 1 SVSLTGAPESVQK NSGGLPERSVSLTGAP GAPESVQKAKMMLDDI R S V Q K A 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 3 1 0 0 2 0 0 13 0 1301.6827 M0R0I5;A0A087WTP3;Q92945;M0QXW7;M0QYH3 M0R0I5 110 122 KHSRP Far upstream element-binding protein 2 yes no 2 0.00063503 86.699 By matching By MS/MS 1 1 2409600 1050300 1359300 3284 29 3523 7423;7424 6176 6176 31 1 SVSSFPVPQDNVDTHPGSGK ISRAATRRSVSSFPVP DTHPGSGKEVRVPATA R S V G K E 0 0 1 2 0 1 0 2 1 0 0 1 0 1 3 4 1 0 0 3 0 0 20 0 2053.9705 C9JAY7;E7EVC7;Q676U5 C9JAY7 124 143 ATG16L1 Autophagy-related protein 16-1 yes no 3 7.1651E-11 101.16 By matching By MS/MS 1 1 11862000 4532000 7329700 3285 455 3524 7425;7426 6177 6177 647 1 SVSSNVASVSPIPAGSK GSPRTPNRSVSSNVAS SPIPAGSKKIDPNMKA R S V S K K 2 0 1 0 0 0 0 1 0 1 0 1 0 0 2 6 0 0 0 3 0 0 17 0 1585.8312 E9PHI6;Q9Y6G9 E9PHI6 296 312 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 0.0016681 81.713 By MS/MS By MS/MS 2 2 17124000 8312400 8811300 3286 635 3525 7427;7428;7429;7430 6178;6179;6180 6178 863;864;865 3 SVSSVLSSLTPAK PPKPDPVKSVSSVLSS LSSLTPAKVAPVINNG K S V A K V 1 0 0 0 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 2 0 0 13 0 1274.7082 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 347 359 MTA1 Metastasis-associated protein MTA1 yes no 2 0.00065739 77.527 By MS/MS By MS/MS 1 1 1094700 549000 545710 3287 588 3526 7431;7432 6181;6182 6181 784;785 2 SVSSYGNIR SPCTPRLRSVSSYGNI VSSYGNIRAVATARSL R S V I R A 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 3 0 0 1 1 0 0 9 0 981.48796 Q8N122 Q8N122 719 727 RPTOR Regulatory-associated protein of mTOR yes yes 2 0.0094664 75.387 By MS/MS By MS/MS 1 1 7026600 3005200 4021400 3288 1770 3527 7433;7434 6183;6184 6183 2488 2 SVSTPSEAGSQDSGDGAVGSR PPMSPSSKSVSTPSEA GDGAVGSRTLHW____ K S V S R T 2 1 0 2 0 1 1 4 0 0 0 0 0 0 1 6 1 0 0 2 0 0 21 0 1949.8563 E9PGG1;E7EUM4;E7ERR6;E7ERH4;E7ET01;E7ETL8;E7EQU2;E7ESD3;E7EMU4;E7EV09;E7EQL5;Q13409 E9PGG1 86 106 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 2 0.0081485 54.09 By matching By MS/MS 1 1 3392000 1842500 1549500 3289 561 3528 7435;7436 6185 6185 743;744;3402 1 SVSVVTGSEQK ATTKPIVRSVSVVTGS VVTGSEQKRKVLEATG R S V Q K R 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 3 1 0 0 3 0 0 11 0 1119.5772 I3L2J8;Q9UPN4 I3L2J8 45 55 CEP131 Centrosomal protein of 131 kDa yes no 2 0.0044899 74.78 By MS/MS By matching 1 1 2262800 950180 1312600 3290 988 3529 7437;7438 6186 6186 1325 1 SVSVVTGSEQKR ATTKPIVRSVSVVTGS VTGSEQKRKVLEATGP R S V K R K 0 1 0 0 0 1 1 1 0 0 0 1 0 0 0 3 1 0 0 3 0 0 12 1 1275.6783 I3L2J8;Q9UPN4 I3L2J8 45 56 CEP131 Centrosomal protein of 131 kDa yes no 2 0.00063843 82.774 By MS/MS By MS/MS 1 1 1797900 813450 984440 3291 988 3530 7439;7440 6187;6188 6187 1325 0 SVTDYAQQNPAAQIPAR ETEQRAPKSVTDYAQQ PAAQIPARQREIEMNR K S V A R Q 4 1 1 1 0 3 0 0 0 1 0 0 0 0 2 1 1 0 1 1 0 0 17 0 1828.9068 A0A0A0MRM8 A0A0A0MRM8 1110 1126 MYO6 yes yes 2 3.5698E-72 160.18 By MS/MS By matching 1 1 7108100 3694300 3413800 3292 145 3531 7441;7442 6189 6189 4026 1 SVTEQGAELSNEER DDMAACMKSVTEQGAE AELSNEERNLLSVAYK K S V E R N 1 1 1 0 0 1 4 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 14 0 1547.7063 E7ESK7;E7EX29;P63104;E5RGE1;E5RIR4;E9PD24;E7EVZ2 E7ESK7 28 41 YWHAZ 14-3-3 protein zeta/delta yes no 2 1.9912E-18 162.68 By MS/MS By MS/MS 1 1 4409800 1742100 2667700 3293 587 3532 7443;7444 6190;6191 6191 2 SVVSDLEADDVK NKELKPQKSVVSDLEA DLEADDVKGSVPLSSS K S V V K G 1 0 0 3 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 12 0 1275.6194 P11388 P11388 1374 1385 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0014449 84.892 By MS/MS By MS/MS 2 2 15772000 7470500 8301000 3294 1258 3533 7445;7446;7447;7448 6192;6193;6194;6195 6194 1655;1656 4 SVWGSLAVQNSPK MLDAATGKSVWGSLAV LAVQNSPKGCHRDKRT K S V P K G 1 0 1 0 0 1 0 1 0 0 1 1 0 0 1 3 0 1 0 2 0 0 13 0 1371.7147 P18615 P18615 343 355 NELFE Negative elongation factor E yes yes 2 3.2643E-65 168.67 By MS/MS By MS/MS 1 1 8045600 2414300 5631300 3295 1289 3534 7449;7450 6196;6197;6198 6198 1698 3 SVYAHFPINVVIQENGSLVEIR LGFRYKMRSVYAHFPI NGSLVEIRNFLGEKYI R S V I R N 1 1 2 0 0 1 2 1 1 3 1 0 0 1 1 2 0 0 1 4 0 0 22 0 2483.3173 D6RAN4;H0Y9V9;P32969;E7ESE0 D6RAN4 94 115 RPL9 60S ribosomal protein L9 yes no 3 2.1943E-11 105.46 By MS/MS By MS/MS 2 2 33660000 15892000 17768000 3296 525 3535;3536 7451;7452;7453;7454 6199;6200;6201;6202 6199 80 4 SVYITFSDYESVQGLPAFR VFPSDFCRSVYITFSD VQGLPAFRYKVPAEIL R S V F R Y 1 1 0 1 0 1 1 1 0 1 1 0 0 2 1 3 1 0 2 2 0 0 19 0 2178.0633 Q14108 Q14108 276 294 SCARB2 Lysosome membrane protein 2 yes yes 2 0.0033496 78.486 By MS/MS By MS/MS 1 1 5951200 2617800 3333400 3297 1513 3537 7455;7456 6203;6204;6205 6203 3 SWDSSSPVDRPEPEAASPTTR GPIVSRTRSWDSSSPV EAASPTTRTRPVTRSM R S W T R T 2 2 0 2 0 0 2 0 0 0 0 0 0 0 4 5 2 1 0 1 0 0 21 1 2271.0404 C9J0I9;Q86WB0 C9J0I9 311 331 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.0010023 68.243 By MS/MS By MS/MS 1 1 19866000 10315000 9551200 3298 432 3538 7457;7458 6206;6207 6207 621;622;623 2 SWGQQAQEYQEQK FSQEVSRRSWGQQAQE AQEYQEQKQRSSSKDG R S W Q K Q 1 0 0 0 0 5 2 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 13 0 1608.7168 Q5VZK9 Q5VZK9 1331 1343 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 2 0.00066091 89.663 By MS/MS By MS/MS 1 1 5236900 2258400 2978500 3299 1657 3539 7459;7460 6208;6209 6209 2316 2 SWLSPRVSPPASPGP PGNPSRARSWLSPRVS SPPASPGP________ R S W G P - 1 1 0 0 0 0 0 1 0 0 1 0 0 0 5 4 0 1 0 1 0 0 15 1 1533.794 A0A0C4DGU2;Q9Y4U1 A0A0C4DGU2 211 225 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes no 2 0.018843 56.599 By MS/MS By matching 1 1 2835300 1373000 1462400 3300 221 3540 7461;7462 6210 6210 317;318 1 SWNSLFCLNSSR ________________ LFCLNSSRPPGHIVYP R S W S R P 0 1 2 0 1 0 0 0 0 0 2 0 0 1 0 4 0 1 0 0 0 0 12 0 1469.6721 Q9NRY7 Q9NRY7 3 14 PLSCR2 Phospholipid scramblase 2 yes yes 2 0.011763 45.997 By MS/MS 1 427300 427300 0 3301 2050 3541 7463 6211 6211 301;302 1 SWSASDPFYTNDR CSPTHISRSWSASDPF DPFYTNDRSILTLSTM R S W D R S 1 1 1 2 0 0 0 0 0 0 0 0 0 1 1 3 1 1 1 0 0 0 13 0 1544.6532 Q9Y2G3 Q9Y2G3 1152 1164 ATP11B Probable phospholipid-transporting ATPase IF yes yes 2 0.0075758 62.042 By MS/MS By matching 1 1 1505000 746740 758300 3302 2143 3542 7464;7465 6212 6212 3110 1 SWSPPPEVSR AGAGGRARSWSPPPEV SPPPEVSRSAHVPSLQ R S W S R S 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 3 0 1 0 1 0 0 10 0 1140.5564 F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31;Q9NR19 F8WCJ4 28 37 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic yes no 2 0.0071528 69.721 By matching By MS/MS 1 1 7876800 3903700 3973200 3303 372 3543 7466;7467 6213 6213 536 1 SYCYYFNEDR PEGTNAYRSYCYYFNE CYYFNEDRETWVDADL R S Y D R E 0 1 1 1 1 0 1 0 0 0 0 0 0 1 0 1 0 0 3 0 0 0 10 0 1415.5452 P05451 P05451 45 54 REG1A Lithostathine-1-alpha yes yes 2 0.007548 78.934 By MS/MS By matching 1 1 1809400 922920 886490 3304 1221 3544 7468;7469 6214 6214 1 SYEAYVLNIVR SFRPNDPKSYEAYVLN AYVLNIVRFLEKYKDS K S Y V R F 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 2 2 0 0 11 0 1325.698 V9GYR2;P05026 V9GYR2 41 51 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 2 0.00080462 104.2 By MS/MS By MS/MS 1 1 1889000 1120300 768630 3305 1219 3545 7470;7471 6215;6216 6216 2 SYELPDGQVITIGNER ASSSSLEKSYELPDGQ VITIGNERFRCPEALF K S Y E R F 0 1 1 1 0 1 2 2 0 2 1 0 0 0 1 1 1 0 1 1 0 0 16 0 1789.8846 P63261;P60709;P68133;P68032;Q6S8J3;P63267;P62736;A5A3E0;Q9BYX7;Q562R1 P63261 239 254 ACTG1;ACTB;ACTA1;ACTC1;POTEE;ACTG2;ACTA2;POTEF;POTEKP;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Beta-actin-like protein 2 yes no 2 0.0014915 74.46 By MS/MS By MS/MS 1 1 6020000 3230700 2789300 3306 1422 3546 7472;7473 6217;6218 6217 2 SYESSEDCSEAAGSPAR SSENYWRKSYESSEDC EAAGSPARKVKMRRH_ K S Y A R K 3 1 0 1 1 0 3 1 0 0 0 0 0 0 1 5 0 0 1 0 0 0 17 0 1801.7061 K7ER58;Q6P6C2 K7ER58 30 46 ALKBH5 RNA demethylase ALKBH5 yes no 2 0.0046928 59.261 By MS/MS By matching 1 1 1809300 814280 995020 3307 1053 3547 7474;7475 6219;6220 6219 1392 2 SYLPQTVR ATDEGMPKSYLPQTVR SYLPQTVRQGGYMPQ_ K S Y V R Q 0 1 0 0 0 1 0 0 0 0 1 0 0 0 1 1 1 0 1 1 0 0 8 0 962.51853 P40189 P40189 904 911 IL6ST Interleukin-6 receptor subunit beta yes yes 2 0.010948 71.379 By MS/MS 1 888090 888090 0 3308 1347 3548 7476 6221 6221 4288 1 SYQDFFEAIRRR QVYYASPRSYQDFFEA FFEAIRRRGDTFYVVS R S Y R R G 1 3 0 1 0 1 1 0 0 1 0 0 0 2 0 1 0 0 1 0 0 0 12 2 1586.7954 P18850 P18850 551 562 ATF6 Cyclic AMP-dependent transcription factor ATF-6 alpha;Processed cyclic AMP-dependent transcription factor ATF-6 alpha yes yes 3 0.0083442 61.353 By MS/MS 1 2567200 0 2567200 3309 1291 3549 7477 6222 6222 4272 1 SYSAGNASQLEQLSR NVCGVRKRSYSAGNAS SQLEQLSRARRSGGEL R S Y S R A 2 1 1 0 0 2 1 1 0 0 2 0 0 0 0 4 0 0 1 0 0 0 15 0 1609.7696 Q14678 Q14678 323 337 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 2 3.9121E-30 145.94 By MS/MS By MS/MS 1 1 9041700 4718200 4323400 3310 1524 3550 7478;7479 6223;6224 6223 2096 2 SYSHDVLPK SSLYNLPRSYSHDVLP YSHDVLPKVSPSSTEA R S Y P K V 0 0 0 1 0 0 0 0 1 0 1 1 0 0 1 2 0 0 1 1 0 0 9 0 1044.524 B7Z3B9;Q13480 B7Z3B9 161 169 GAB1 GRB2-associated-binding protein 1 yes no 2 0.0148 77.533 By MS/MS 1 0 0 0 3311 406 3551 7480 6225 6225 562 1 SYSLSELSVLQAK NPFFRSKRSYSLSELS ELSVLQAKSDAPTSSS R S Y A K S 1 0 0 0 0 1 1 0 0 0 3 1 0 0 0 4 0 0 1 1 0 0 13 0 1423.7559 Q9P0V3 Q9P0V3 244 256 SH3BP4 SH3 domain-binding protein 4 yes yes 2 0.0029547 71.558 By MS/MS By matching 1 1 2519800 964680 1555100 3312 2083 3552 7481;7482 6226 6226 2990 1 SYSPDGKESPSDKK KKDKSRKRSYSPDGKE KESPSDKKSKTDGSQK R S Y K K S 0 0 0 2 0 0 1 1 0 0 0 3 0 0 2 4 0 0 1 0 0 0 14 2 1523.7104 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87 D6REM6 596 609 MATR3 Matrin-3 yes no 2;3 8.0618E-17 133.23 By MS/MS By MS/MS 3 3 151010000 89914000 61099000 3313 257 3553;3554 7483;7484;7485;7486;7487;7488 6227;6228;6229;6230;6231;6232;6233;6234;6235;6236;6237;6238;6239;6240 6240 371;372 14 SYTLVVAK PPWLKKQKSYTLVVAK SYTLVVAKDGGDKKEP K S Y A K D 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 8 0 879.50657 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 87 94 EPB41L2 Band 4.1-like protein 2 yes no 2 1.2571E-14 149.4 By MS/MS By MS/MS 2 2 19395000 9345800 10049000 3314 1125 3555 7489;7490;7491;7492 6241;6242;6243;6244 6241 1498;4241 4 SYTSTQTSSK DDNESYYKSYTSTQTS TSTQTSSKSFLKSYDS K S Y S K S 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 4 3 0 1 0 0 0 10 0 1088.4986 H0Y876;H7C4R2;Q96JN2 H0Y876 366 375 CCDC136 Coiled-coil domain-containing protein 136 yes no 2 0.018 40.045 By MS/MS 1 0 0 0 3315 849 3556 7493 6245 6245 1143;1144;1145;3512;3513;3514 1 SYYYAISDFAVGGR FNDPKVLKSYYYAISD SDFAVGGRCKCNGHAS K S Y G R C 2 1 0 1 0 0 0 2 0 1 0 0 0 1 0 2 0 0 3 1 0 0 14 0 1567.7307 P11047 P11047 272 285 LAMC1 Laminin subunit gamma-1 yes yes 2 0.00035952 93.058 By MS/MS By matching 1 1 737320 377030 360290 3316 1255 3557 7494;7495 6246 6246 1 TAADVVSPGANSVDSR TEKVKDPKTAADVVSP GANSVDSRVQRPKEES K T A S R V 3 1 1 2 0 0 0 1 0 0 0 0 0 0 1 3 1 0 0 3 0 0 16 0 1544.7431 Q01804 Q01804 1000 1015 OTUD4 OTU domain-containing protein 4 yes yes 2 5.9045E-30 137.73 By MS/MS By MS/MS 1 1 9259800 5020900 4239000 3317 1452 3558 7496;7497 6247;6248 6248 1935 2 TAAPAAPTMASPR CGTVCETRTAAPAAPT APTMASPRGSGSSTSL R T A P R G 5 1 0 0 0 0 0 0 0 0 0 0 1 0 3 1 2 0 0 0 0 0 13 0 1240.6234 C9J7S4;C9JVL3 C9J7S4 36 48 PLEKHG2 yes no 2 0.014079 54.066 By matching By MS/MS 1 1 6470200 2717900 3752300 3318 449 3559 7498;7499 6249 6249 56 3368 1 TADGRVSPAGGTLDDKPK TKITHLVRTADGRVSP GTLDDKPKEQLQRSLP R T A P K E 2 1 0 3 0 0 0 3 0 0 1 2 0 0 2 1 2 0 0 1 0 0 18 2 1783.9064 C9JA69;Q8WY36 C9JA69 788 805 BBX HMG box transcription factor BBX yes no 3 0.003409 83.252 By matching By MS/MS 1 1 15062000 7349500 7712700 3319 453 3560 7500;7501 6250 6250 645 1 TADSVFCPHYEK SDIIIPLRTADSVFCP VFCPHYEKVSGDYGHP R T A E K V 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 1 0 1 1 0 0 12 0 1452.6344 P52799 P52799 295 306 EFNB2 Ephrin-B2 yes yes 2;3 0.00062773 91.855 By MS/MS By MS/MS 2 2 2979800 1087200 1892700 3320 1400 3561 7502;7503;7504;7505 6251;6252;6253;6254 6254 4319 4 TAESQTPTPSATSFFSGK STEKESEKTAESQTPT ATSFFSGKSPVTTLLE K T A G K S 2 0 0 0 0 1 1 1 0 0 0 1 0 2 2 4 4 0 0 0 0 0 18 0 1842.8636 H0YCK3;P55265 H0YCK3 591 608 ADAR Double-stranded RNA-specific adenosine deaminase yes no 2 1.1666E-28 121.51 By matching By MS/MS 1 1 7552300 1267600 6284700 3321 873 3562 7506;7507 6255 6255 3523 1 TAFISDFAVTADGNAFIGDIK AFDLEIPKTAFISDFA NAFIGDIKDKVTAWKQ K T A I K D 4 0 1 3 0 0 0 2 0 3 0 1 0 3 0 1 2 0 0 1 0 0 21 0 2172.0739 P19827;F8WAS2 P19827 94 114 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 2;3 1.0945E-10 101.36 By matching By MS/MS 1 2 18710000 2571500 16138000 3322 1296 3563 7508;7509;7510 6256;6257 6256 2 TAFQEALDAAGDK MVKQIESKTAFQEALD ALDAAGDKLVVVDFSA K T A D K L 4 0 0 2 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 13 0 1335.6307 P10599 P10599 9 21 TXN Thioredoxin yes yes 2 0.00065157 79.659 By MS/MS By MS/MS 1 1 1691700 833050 858650 3323 1252 3564 7511;7512 6258;6259 6259 2 TAFYLAEFFVNEAR SHAPNAVKTAFYLAEF EFFVNEARKNNHHFKS K T A A R K 3 1 1 0 0 0 2 0 0 0 1 0 0 3 0 0 1 0 1 1 0 0 14 0 1676.8199 Q92820 Q92820 267 280 GGH Gamma-glutamyl hydrolase yes yes 2 0.0039614 75.045 By MS/MS 1 1040200 0 1040200 3324 1863 3565 7513 6260 6260 0 TAFYNEDDSEEEQR RTRNQGRRTAFYNEDD DDSEEEQRQLLFEDTS R T A Q R Q 1 1 1 2 0 1 4 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 14 0 1731.686 Q8WWQ0 Q8WWQ0 1775 1788 PHIP PH-interacting protein yes yes 2 9.1894E-17 128.71 By MS/MS By MS/MS 1 1 12108000 6547400 5560200 3325 1840 3566 7514;7515 6261;6262 6261 2591 2 TAHNSEAADLEESFNEHELEPSSPK VYCRKHKKTAHNSEAA ELEPSSPKSKKKSRKG K T A P K S 3 0 2 1 0 0 6 0 2 0 2 1 0 1 2 4 1 0 0 0 0 0 25 0 2767.2209 Q5JRC6;A0A0D9SGE8 Q5JRC6 134 158 PHF6 yes no 3 0.012024 42.322 By matching By MS/MS 1 1 10257000 5088100 5169300 3326 239 3567 7516;7517 6263 6263 346;347 1 TAHNSEADLEESFNEHELEPSSPK VYCRKHKKTAHNSEAD ELEPSSPKSKKKSRKG K T A P K S 2 0 2 1 0 0 6 0 2 0 2 1 0 1 2 4 1 0 0 0 0 0 24 0 2696.1838 Q8IWS0 Q8IWS0 134 157 PHF6 PHD finger protein 6 yes yes 4 5.3339E-05 82.146 By MS/MS By MS/MS 1 1 8399100 4872200 3527000 3327 1754 3568 7518;7519 6264;6265 6264 2469;2470 2 TAHNSEADLEESFNEHELEPSSPKSK VYCRKHKKTAHNSEAD EPSSPKSKKKSRKGRP K T A S K K 2 0 2 1 0 0 6 0 2 0 2 2 0 1 2 5 1 0 0 0 0 0 26 1 2911.3108 Q8IWS0 Q8IWS0 134 159 PHF6 PHD finger protein 6 yes yes 4 3.3441E-06 81.967 By matching By MS/MS 1 1 11199000 4452500 6746200 3328 1754 3569 7520;7521 6266 6266 2469;2470 1 TALPAQSAATLPAR PTSDRKAKTALPAQSA SAATLPARTQETPSAQ K T A A R T 5 1 0 0 0 1 0 0 0 0 2 0 0 0 2 1 2 0 0 0 0 0 14 0 1366.7569 A0A087WUZ3;Q01082 A0A087WUZ3 2180 2193 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2;3 0.00081344 85.28 By MS/MS By MS/MS 2 2 52652000 24988000 27663000 3329 49 3570 7522;7523;7524;7525 6267;6268;6269;6270 6267 67;3223 4 TALSSTESCTMKGEEKSPK MAKDLSSKTALSSTES KGEEKSPKTKKDKRPP K T A P K T 1 0 0 0 1 0 3 1 0 0 1 3 1 0 1 4 3 0 0 0 0 0 19 2 2069.9609 Q96T23;H0YER1;H0YCN2 Q96T23 554 572 RSF1 Remodeling and spacing factor 1 yes no 3 0.014606 52.769 By MS/MS By MS/MS 1 1 5750100 2729400 3020800 3330 1933 3571 7526;7527 6271;6272 6272 2737 2 TAPPALPTGYDSEEEEESRPMSYDEKR KLPKKATKTAPPALPT PMSYDEKRQLSLDINK K T A K R Q 2 2 0 2 0 0 6 1 0 0 1 1 1 0 4 3 2 0 2 0 0 0 27 2 3083.3666 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440;A0A0G2JHN8;A0A140T9I1 H0Y6K2 628 654 BRD2 Bromodomain-containing protein 2 yes no 4 0.0049658 42.44 By MS/MS By matching 1 1 3948700 1652900 2295800 3331 244 3572 7528;7529 6273 6273 3303 1 TAPRQEAIPDLEDSPPVSDSEEQQESAR KLHNESKKTAPRQEAI EEQQESARAVPEKSTA K T A A R A 3 2 0 3 0 3 5 0 0 1 1 0 0 0 4 4 1 0 0 1 0 0 28 1 3080.417 Q9BTC0 Q9BTC0 792 819 DIDO1 Death-inducer obliterator 1 yes yes 3 0.013218 44.301 By MS/MS By matching 1 1 5652600 3180200 2472300 3332 1959 3573 7530;7531 6274 6274 2771;2772;2773 1 TAPSSPLTSPSDTR RNTGGDSKTAPSSPLT LTSPSDTRSFFKVPEM K T A T R S 1 1 0 1 0 0 0 0 0 0 1 0 0 0 3 4 3 0 0 0 0 0 14 0 1415.6892 A0A087WVA8;Q8IWB9 A0A087WVA8 262 275 TEX2 Testis-expressed sequence 2 protein yes no 2 0.02099 57.174 By MS/MS By matching 1 1 2494900 1388800 1106100 3333 51 3574 7532;7533 6275 6275 68;69 1 TAPTLSPEHWK SGPPELRKTAPTLSPE TLSPEHWKAVPPVSPE K T A W K A 1 0 0 0 0 0 1 0 1 0 1 1 0 0 2 1 2 1 0 0 0 0 11 0 1265.6404 Q96JM3 Q96JM3 400 410 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.005926 70.089 By MS/MS By MS/MS 1 1 8285000 4038300 4246700 3334 1903 3575 7534;7535 6276;6277 6277 2694;3888 2 TAQVPSPPR ITIDDPVRTAQVPSPP AQVPSPPRGKISNIVH R T A P R G 1 1 0 0 0 1 0 0 0 0 0 0 0 0 3 1 1 0 0 1 0 0 9 0 951.51378 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 949 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 3.646E-06 133.91 By MS/MS By MS/MS 1 1 29667000 15116000 14551000 3335 576 3576 7536;7537 6278;6279;6280;6281;6282;6283;6284;6285;6286 6280 771 9 TAQVPSPPRGK ITIDDPVRTAQVPSPP VPSPPRGKISNIVHIS R T A G K I 1 1 0 0 0 1 0 1 0 0 0 1 0 0 3 1 1 0 0 1 0 0 11 1 1136.6302 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 951 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 4.3406E-05 120.03 By MS/MS By MS/MS 3 2 13899000 8712500 5186200 3336 576 3577 7538;7539;7540;7541;7542 6287;6288;6289;6290;6291;6292 6288 771 6 TASEGDGGAAAGAAAAGAR KCSSCRVRTASEGDGG GAAAAGARPVSVAGSP R T A A R P 9 1 0 1 0 0 1 5 0 0 0 0 0 0 0 1 1 0 0 0 0 0 19 0 1530.7023 Q9Y4H2 Q9Y4H2 363 381 IRS2 Insulin receptor substrate 2 yes yes 2 0.0087867 54.004 By MS/MS By matching 1 1 2198300 1132200 1066100 3337 2160 3578 7543;7544 6293 6293 3139 1 TASELLLDR SLYQGLMRTASELLLD ASELLLDRRLRIPELE R T A D R R 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 0 0 0 9 0 1016.5502 Q92508 Q92508 1644 1652 PIEZO1 Piezo-type mechanosensitive ion channel component 1 yes yes 2 0.013452 67.897 By MS/MS By matching 1 1 1460800 611170 849610 3338 1846 3579 7545;7546 6294 6294 2600 1 TASESISNLSEAGSIK PPISNLTKTASESISN LSEAGSIKKGERELKI K T A I K K 2 0 1 0 0 0 2 1 0 2 1 1 0 0 0 5 1 0 0 0 0 0 16 0 1592.7893 F5H1T5;F6VGP8;F5H6A0;J3KP58;P30622 F5H1T5 191 206 CLIP1 CAP-Gly domain-containing linker protein 1 yes no 2 7.3859E-47 150.9 By matching By MS/MS 1 1 8136800 3602700 4534100 3339 712 3580 7547;7548 6295 6295 946 1 TASETRSEGSEYEEIPKR HPPAPRGRTASETRSE EYEEIPKRRRQRGSET R T A K R R 1 2 0 0 0 0 5 1 0 1 0 1 0 0 1 3 2 0 1 0 0 0 18 2 2067.9709 P48634 P48634 1083 1100 PRRC2A Protein PRRC2A yes yes 3 0.020124 41.088 By matching By MS/MS 1 1 5301800 3033800 2268100 3340 1373 3581 7549;7550 6296 6296 1832;1833;3700 1 TASFSESR TSTPAPSRTASFSESR TASFSESRADEVAPAK R T A S R A 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 3 1 0 0 0 0 0 8 0 883.40356 P53396 P53396 453 460 ACLY ATP-citrate synthase yes yes 2 0.0001222 108.43 By MS/MS By MS/MS 2 2 35885000 20717000 15168000 3341 1404 3582 7551;7552;7553;7554 6297;6298;6299;6300 6300 1896 4 TASFSESRADEVAPAK TSTPAPSRTASFSESR ADEVAPAKKAKPAMPQ R T A A K K 4 1 0 1 0 0 2 0 0 0 0 1 0 1 1 3 1 0 0 1 0 0 16 1 1664.8006 P53396 P53396 453 468 ACLY ATP-citrate synthase yes yes 3 0.018581 45.357 By MS/MS By matching 1 1 16595000 8978700 7616800 3342 1404 3583 7555;7556 6301 6301 1896 1 TASFSESRADEVAPAKK TSTPAPSRTASFSESR DEVAPAKKAKPAMPQD R T A K K A 4 1 0 1 0 0 2 0 0 0 0 2 0 1 1 3 1 0 0 1 0 0 17 2 1792.8955 P53396 P53396 453 469 ACLY ATP-citrate synthase yes yes 3 0.0034393 68.525 By MS/MS By MS/MS 1 1 152090000 107190000 44903000 3343 1404 3584 7557;7558 6302;6303 6302 1896 2 TASGSSVTSLDGTR MTRLMRSRTASGSSVT VTSLDGTRSRSHTSEG R T A T R S 1 1 0 1 0 0 0 2 0 0 1 0 0 0 0 4 3 0 0 1 0 0 14 0 1337.6423 E5RJY1;E7ESM1;Q92597 E5RJY1 37 50 NDRG1 Protein NDRG1 yes no 2 2.8197E-14 123.76 By MS/MS By MS/MS 2 2 38272000 18203000 20068000 3344 556 3585;3586 7559;7560;7561;7562 6304;6305;6306 6305 737;738 3 TASLPGYGR ASHIPSSKTASLPGYG ASLPGYGRNGLHRPVS K T A G R N 1 1 0 0 0 0 0 2 0 0 1 0 0 0 1 1 1 0 1 0 0 0 9 0 920.47158 J3QSX6;F8W8M4;A0A0A0MRL6;O14639 J3QSX6 276 284 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.0022652 105.17 By MS/MS By MS/MS 1 1 11404000 5522300 5882200 3345 144 3587 7563;7564 6307;6308 6307 194 2 TASLTSAASVDGNR MTRLSRSRTASLTSAA AASVDGNRSRSRTLSQ R T A N R S 3 1 1 1 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 0 0 14 0 1348.6583 G3V578;H0YJT9;A0A0A0MS87;Q9UN36 G3V578 243 256 NDRG2 Protein NDRG2 yes no 2 0.0001925 80.746 By MS/MS By MS/MS 2 2 22643000 9945900 12698000 3346 157 3588;3589 7565;7566;7567;7568 6309;6310;6311 6309 213;214;3266 2 TASLVINQR T A Q R 1 1 1 0 0 1 0 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1000.5665 REV__A2RRP1 yes yes 2 0.022465 67.207 By MS/MS 1 2221100 0 2221100 + 3347 2189 3590 7569 6312 6312 3176 0 TASPLPLRPDAPVEK LHQQYTSRTASPLPLR RPDAPVEKSPEETATQ R T A E K S 2 1 0 1 0 0 1 0 0 0 2 1 0 0 4 1 1 0 0 1 0 0 15 1 1589.8777 Q9HCK8 Q9HCK8 1993 2007 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 3 0.019104 45.79 By MS/MS 1 410470 410470 0 3348 2032 3591 7570 6313 6313 2902 1 TASPPPPPK PSPPPKRRTASPPPPP ASPPPPPKRRASPSPP R T A P K R 1 0 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 9 0 890.48617 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 623 631 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0011277 96.113 By MS/MS By MS/MS 1 1 6601300 3092200 3509100 3349 346 3592 7571;7572 6314;6315;6316;6317;6318 6318 516;3333 5 TASPPPPPKR PSPPPKRRTASPPPPP SPPPPPKRRASPSPPP R T A K R R 1 1 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 10 1 1046.5873 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 623 632 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.0022 72.531 By MS/MS By MS/MS 3 2 9702800 4133900 5568900 3350 346 3593;3594 7573;7574;7575;7576;7577 6319;6320;6321;6322;6323;6324;6325 6320 516;3333 7 TASQGPQTDSVIQNSENIK WQHFPRYRTASQGPQT IQNSENIKAYHSGEGH R T A I K A 1 0 2 1 0 3 1 1 0 2 0 1 0 0 1 3 2 0 0 1 0 0 19 0 2015.976 Q9NZN5;E9PMR6 Q9NZN5 1286 1304 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 3 0.0065915 59.943 By MS/MS By matching 1 1 5198000 2408500 2789400 3351 2080 3595 7578;7579 6326 6326 3949 1 TASRPAPLVQQLSPSLLPNSK KPANTLVKTASRPAPL PSLLPNSKSPREVPSP K T A S K S 2 1 1 0 0 2 0 0 0 0 4 1 0 0 4 4 1 0 0 1 0 0 21 1 2203.2325 Q9Y6X9 Q9Y6X9 684 704 MORC2 MORC family CW-type zinc finger protein 2 yes yes 3 9.0693E-11 107.75 By MS/MS By MS/MS 1 1 937780 937780 0 3352 2179 3596 7580;7581 6327;6328 6328 3170;3171 2 TASRPDDIPDSPSSPK PVIPQKPRTASRPDDI PDSPSSPKVALLPPVL R T A P K V 1 1 0 3 0 0 0 0 0 1 0 1 0 0 4 4 1 0 0 0 0 0 16 1 1668.7955 Q5VZK9;A0A0U1RQQ1 Q5VZK9 1278 1293 LRRC16A Leucine-rich repeat-containing protein 16A yes no 3 0.0020872 61.757 By MS/MS 1 723990 723990 0 3353 1657 3597 7582 6329 6329 2317;2318 1 TATCHSSSSPPIDAASAEPYGFR STSAVKEKTATCHSSS SAEPYGFRASVLFDTM K T A F R A 4 1 0 1 1 0 1 1 1 1 0 0 0 1 3 5 2 0 1 0 0 0 23 0 2408.0703 P46821 P46821 1811 1833 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 6.7699E-05 68.189 By matching By MS/MS 1 1 15229000 7450700 7778000 3354 1367 3598 7583;7584 6330 6330 4300 1 TAVAPSAVNLADPRTPTAPAVNLAGAR AMNLASPRTAVAPSAV AVNLAGARTPAALAAL R T A A R T 8 2 2 1 0 0 0 1 0 0 2 0 0 0 4 1 3 0 0 3 0 0 27 1 2600.4034 Q9UQ35 Q9UQ35 2275 2301 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 1.2323E-05 69.72 By matching By MS/MS 1 1 8869400 3551300 5318100 3355 2134 3599 7585;7586 6331 6331 3970 1 TAVIPINGSPR MLLKEPYKTAVIPING IPINGSPRTPRRGQNR K T A P R T 1 1 1 0 0 0 0 1 0 2 0 0 0 0 2 1 1 0 0 1 0 0 11 0 1123.635 P06400 P06400 241 251 RB1 Retinoblastoma-associated protein yes yes 2 0.0071102 75.669 By MS/MS By MS/MS 2 2 11707000 5587900 6119100 3356 1225 3600;3601 7587;7588;7589;7590 6332;6333;6334 6333 164 1616 3 TCDWLPKPNMSASCK EILVYLEKTCDWLPKP PNMSASCKEIVDSYLP K T C C K E 1 0 1 1 2 0 0 0 0 0 1 2 1 0 2 2 1 1 0 0 0 0 15 1 1793.7899 C9JIZ6;P07602 C9JIZ6 93 107 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 2 0.015464 53.754 By MS/MS 1 223850 0 223850 3357 466 3602 7591 6335 6335 57 3371 0 TCSLPDLSK ANNPKMLRTCSLPDLS CSLPDLSKLFRTLMDV R T C S K L 0 0 0 1 1 0 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 9 0 1019.4957 Q96PY6 Q96PY6 1050 1058 NEK1 Serine/threonine-protein kinase Nek1 yes yes 2 0.0030193 89.9 By matching By MS/MS 1 1 16065000 7905300 8160000 3358 1921 3603 7592;7593 6336 6336 2717 1 TDALTSSPGR SPGRSSRRTDALTSSP ALTSSPGRDLPPFEDE R T D G R D 1 1 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1003.4934 P49736;C9J013;C9JZ21;F8WDM3 P49736 35 44 MCM2 DNA replication licensing factor MCM2 yes no 2 0.0060365 92.611 By MS/MS By MS/MS 1 2 2238900 715180 1523700 3359 1381 3604 7594;7595;7596 6337;6338;6339;6340 6337 1846;1847;3703 4 TDCPIHVYFVLDTSESVTMQSPTDILLFHMK RNNNCPEKTDCPIHVY DILLFHMKQFVPQFIS K T D M K Q 0 0 0 3 1 1 1 0 2 2 3 1 2 2 2 3 4 0 1 3 0 0 31 0 3623.735 P12110;C9JH44 P12110 41 71 COL6A2 Collagen alpha-2(VI) chain yes no 4 9.3335E-199 185.34 By MS/MS By MS/MS 1 1 23890000 18073000 5816300 3360 1263 3605 7597;7598 6341;6342;6343 6342 158;159 3 TDDYLDQPCYETINR GHALALYRTDDYLDQP PCYETINRIKLYSESL R T D N R I 0 1 1 3 1 1 1 0 0 1 1 0 0 0 1 0 2 0 2 0 0 0 15 0 1901.8102 P50395;Q5SX91;Q5SX87 P50395 194 208 GDI2 Rab GDP dissociation inhibitor beta yes no 2 0.0088789 58.674 By matching By MS/MS 1 1 1761800 914130 847700 3361 1388 3606 7599;7600 6344 6344 1 TDESSPVLSPR FHISSHSKTDESSPVL SSPVLSPRKPSHPVMD K T D P R K 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1186.583 Q8NA72 Q8NA72 101 111 POC5 Centrosomal protein POC5 yes yes 2 0.0075377 66.326 By MS/MS 1 1062300 1062300 0 3362 1787 3607 7601 6345 6345 2508 1 TDGFAEAIHSPQVAGVPR PTLVVPHRTDGFAEAI PQVAGVPRFRFGPPED R T D P R F 3 1 0 1 0 1 1 2 1 1 0 0 0 1 2 1 1 0 0 2 0 0 18 0 1850.9275 P12270 P12270 2146 2163 TPR Nucleoprotein TPR yes yes 2;3 7.8908E-16 112.55 By MS/MS By MS/MS 2 2 22113000 10569000 11544000 3363 1264 3608 7602;7603;7604;7605 6346;6347;6348;6349 6349 1669 4 TDGSISGDRQPVTVADYISR RRRNRGNRTDGSISGD TVADYISRAESQSRQR R T D S R A 1 2 0 3 0 1 0 2 0 2 0 0 0 0 1 3 2 0 1 2 0 0 20 1 2136.0447 P51116 P51116 598 617 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 0.0041569 56.327 By MS/MS By MS/MS 1 2 16549000 5830200 10719000 3364 1392 3609;3610 7606;7607;7608 6350;6351;6352 6351 1874;1875 3 TDKSSASAPDVDDPEAFPALA GRPNRGSRTDKSSASA PEAFPALA________ R T D L A - 5 0 0 4 0 0 1 0 0 0 1 1 0 1 3 3 1 0 0 1 0 0 21 1 2102.9644 Q8NC51 Q8NC51 388 408 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 2.8942E-44 132.9 By MS/MS By MS/MS 1 1 75806000 40545000 35261000 3365 1791 3611 7609;7610 6353;6354 6354 2514;2515;3859 2 TDNSSLSSPLNPK RKPSKKSKTDNSSLSS LSSPLNPKLWCHVHLK K T D P K L 0 0 2 1 0 0 0 0 0 0 2 1 0 0 2 4 1 0 0 0 0 0 13 0 1358.6678 Q9UIG0 Q9UIG0 323 335 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.0066305 64.313 By MS/MS By matching 1 1 1306600 778540 528080 3366 2100 3612 7611;7612 6355 6355 3011 1 TDQTPRLPAPK TEKQQWGRTDQTPRLP TPRLPAPKEQGRAADA R T D P K E 1 1 0 1 0 1 0 0 0 0 1 1 0 0 3 0 2 0 0 0 0 0 11 1 1222.667 F5H1L9 F5H1L9 35 45 JPH4 yes yes 2 0.010616 70.412 By MS/MS 1 44146000 44146000 0 3367 711 3613 7613 6356 6356 385 3471 1 TDRFNIKSR STLASKKRTDRFNIKS DRFNIKSRERSGGPVT R T D S R E 0 2 1 1 0 0 0 0 0 1 0 1 0 1 0 1 1 0 0 0 0 0 9 2 1135.6098 Q13029 Q13029 1634 1642 PRDM2 PR domain zinc finger protein 2 yes yes 2 0.018563 56.087 By matching By MS/MS 1 1 2875100 1613800 1261300 3368 1487 3614 7614;7615 6357 6357 2028;3737 1 TDSPDMHEDT APPRKVARTDSPDMHE SPDMHEDT________ R T D D T - 0 0 0 3 0 0 1 0 1 0 0 0 1 0 1 1 2 0 0 0 0 0 10 0 1146.4135 Q9BW61 Q9BW61 93 102 DDA1 DET1- and DDB1-associated protein 1 yes yes 2 0.0018182 88.134 By MS/MS By MS/MS 2 2 5041000 2526000 2515000 3369 1966 3615 7616;7617;7618;7619 6358;6359;6360;6361 6360 2783 4 TDSREDEISPPPPNPVVK NLQKAGTRTDSREDEI PPPNPVVKGRRRRGAI R T D V K G 0 1 1 2 0 0 2 0 0 1 0 1 0 0 5 2 1 0 0 2 0 0 18 1 1975.9851 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644 K7EMU2 75 92 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 3 1.5621E-15 111.4 By MS/MS By MS/MS 1 1 27113000 11713000 15400000 3370 1034 3616 7620;7621 6362;6363;6364;6365;6366 6362 1373;1374;3573 5 TDSTCRMVTSESKNVK GDCPSDWKTDSTCRMV TSESKNVKLTVSNVLK K T D V K L 0 1 1 1 1 0 1 0 0 0 0 2 1 0 0 3 3 0 0 2 0 0 16 2 1841.8611 G3V0E5;P02786 G3V0E5 278 293 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 3 0.019157 41.996 By matching By MS/MS 1 1 1453100 398740 1054300 3371 777 3617 7622;7623 6367 6367 93 3489 1 TDSVIIADQTPTPTR TLKFGPARTDSVIIAD DQTPTPTRFLKNCEEV R T D T R F 1 1 0 2 0 1 0 0 0 2 0 0 0 0 2 1 4 0 0 1 0 0 15 0 1613.8261 K7ESA4;K7ELQ4;P17544 K7ESA4 42 56 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes no 2 6.5476E-05 93.181 By MS/MS By MS/MS 2 2 17122000 7123700 9998000 3372 1044 3618;3619 7624;7625;7626;7627 6368;6369;6370 6370 3576;3577 3 TDTGIVTVEQSPSSSK LKMKDDSKTDTGIVTV EQSPSSSKLKVMQTDE K T D S K L 0 0 0 1 0 1 1 1 0 1 0 1 0 0 1 4 3 0 0 2 0 0 16 0 1634.7999 Q8NFC6;H0Y9Y2 Q8NFC6 2895 2910 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 2 1.0961E-05 94.569 By MS/MS By matching 1 1 3705500 1793600 1911900 3373 1803 3620 7628;7629 6371 6371 2540 1 TDYIPLLDVDEK VVGETVGKTDYIPLLD PLLDVDEKTGNSESKK K T D E K T 0 0 0 3 0 0 1 0 0 1 2 1 0 0 1 0 1 0 1 1 0 0 12 0 1419.7133 E7EVA0;P27816;H7C456;A0A0J9YVV8;A0A0J9YW37 E7EVA0 45 56 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.010635 53.751 By MS/MS By MS/MS 1 1 2085300 1136200 949090 3374 596 3621 7630;7631 6372;6373 6372 4146 2 TEAQDLCRASPEPPGPESSSR RAETTQARTEAQDLCR PGPESSSRWLDDLLAS R T E S R W 2 2 0 1 1 1 3 1 0 0 1 0 0 0 4 4 1 0 0 0 0 0 21 1 2270.0233 Q9C0C2 Q9C0C2 663 683 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 0.020595 41.988 By matching By MS/MS 1 1 24782000 14163000 10620000 3375 1985 3622 7632;7633 6374 6374 2830 1 TEDSIRDYEDGMEVDTTPTVAGQFEDADVDH QYNMAGVRTEDSIRDY FEDADVDH________ R T E D H - 2 1 0 7 0 1 4 2 1 1 0 0 1 1 1 1 4 0 1 3 0 0 31 1 3456.4423 P54105;E9PMI6;J3KN38 P54105 207 237 CLNS1A Methylosome subunit pICln yes no 3 0.0044137 46.296 By MS/MS By matching 1 1 21439000 8995900 12443000 3376 1408 3623 7634;7635 6375 6375 188 3713 1 TEEIFYYYDTNTGK ATRTMNTRTEEIFYYY YYDTNTGKEGKLDIVM R T E G K E 0 0 1 1 0 0 2 1 0 1 0 1 0 1 0 0 3 0 3 0 0 0 14 0 1742.7675 Q6UX06 Q6UX06 450 463 OLFM4 Olfactomedin-4 yes yes 2;3 0 294.24 By MS/MS By MS/MS 3 3 188340000 76710000 111630000 3377 1692 3624;3625 7636;7637;7638;7639;7640;7641 6376;6377;6378;6379;6380;6381;6382 6379 230 7 TEEPLGSPHPSGTVESPGEGPQDTR EVLPAAQKTEEPLGSP GEGPQDTRIEGSVQLS K T E T R I 0 1 0 1 0 1 4 4 1 0 1 0 0 0 5 3 3 0 0 1 0 0 25 0 2560.1678 A0A0A0MR84;M0R202;A0A0B4J2G2;A0A087WUM8;Q9NWS9 A0A0A0MR84 131 155 ZNF446 Zinc finger protein 446 yes no 3 0.0069777 52.09 By MS/MS By matching 1 1 2086500 1229800 856730 3378 42 3626 7642;7643 6383 6383 3219 1 TEFLDLDNSPLSPPSPR KDKEEKKKTEFLDLDN PLSPPSPRTKSRTHTR K T E P R T 0 1 1 2 0 0 1 0 0 0 3 0 0 1 4 3 1 0 0 0 0 0 17 0 1883.9265 Q8NCF5 Q8NCF5 190 206 NFATC2IP NFATC2-interacting protein yes yes 2 0.0038069 60.949 By matching By MS/MS 1 1 4321900 2385900 1936000 3379 1792 3627 7644;7645 6384 6384 2517 1 TEGTYDLPYWDR HWRNRKKKTEGTYDLP YDLPYWDRAGWWKGMK K T E D R A 0 1 0 2 0 0 1 1 0 0 1 0 0 0 1 0 2 1 2 0 0 0 12 0 1514.6678 Q96PD2 Q96PD2 561 572 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 yes yes 2 0.0040483 61.815 By MS/MS 1 412900 0 412900 3380 1914 3628 7646 6385 6385 4423 1 TEIMSPLYQDEAPK QTPPSCLKTEIMSPLY LYQDEAPKGTEASSGT K T E P K G 1 0 0 1 0 1 2 0 0 1 1 1 1 0 2 1 1 0 1 0 0 0 14 0 1620.7705 Q8IY81 Q8IY81 580 593 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.00020522 82.925 By MS/MS By MS/MS 1 1 4549500 2023800 2525700 3381 1759 3629 7647;7648 6386;6387 6387 2474 2 TEKSLANLNLNNMLDK YDVDFLCKTEKSLANL NLNNMLDKKAVGTPVA K T E D K K 1 0 4 1 0 0 1 0 0 0 4 2 1 0 0 1 1 0 0 0 0 0 16 1 1816.9353 P47974 P47974 18 33 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 yes yes 3 0.017116 43.69 By MS/MS By matching 1 1 6231200 3072600 3158600 3382 1372 3630 7649;7650 6388 6388 193 181 1821 1 TEPTSPTPSAFK TTLPVMIKTEPTSPTP SPTPSAFKGPSHSGNP K T E F K G 1 0 0 0 0 0 1 0 0 0 0 1 0 1 3 2 3 0 0 0 0 0 12 0 1261.619 Q86XN7 Q86XN7 609 620 PROSER1 Proline and serine-rich protein 1 yes yes 2 0.0041272 71.614 By MS/MS 1 1139200 0 1139200 3383 1741 3631 7651 6389 6389 2449 1 TEQSSVSSLK T E L K 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 4 1 0 0 1 0 0 10 0 1064.535 REV__E9PG35 yes yes 2 0.018958 57.859 By MS/MS 1 3961700 0 3961700 + 3384 2198 3632 7652 6390 6390 3184 1 TESAYDWTSLSSSSIK NYQEALKRTESAYDWT SLSSSSIKSGSSSSSI R T E I K S 1 0 0 1 0 0 1 0 0 1 1 1 0 0 0 6 2 1 1 0 0 0 16 0 1760.8105 C9J164;C9K0J5;Q70E73 C9J164 520 535 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 2 1.5541E-118 179.93 By MS/MS By MS/MS 1 1 10941000 3063600 7877200 3385 434 3633 7653;7654 6391;6392 6392 626;4102 2 TESEVPPRPASPK ASAATKERTESEVPPR PPRPASPKVTRSPPET R T E P K V 1 1 0 0 0 0 2 0 0 0 0 1 0 0 4 2 1 0 0 1 0 0 13 1 1393.7201 Q9Y3L3 Q9Y3L3 534 546 SH3BP1 SH3 domain-binding protein 1 yes yes 2 0.022346 56.122 By MS/MS By matching 1 1 2613000 1331000 1282000 3386 2153 3634 7655;7656 6393 6393 3130 0 TESPATAAETASEELDNR EPEPPSGRTESPATAA ASEELDNRSLEEILNS R T E N R S 4 1 1 1 0 0 4 0 0 0 1 0 0 0 1 2 3 0 0 0 0 0 18 0 1890.8443 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3 C9JWF0 39 56 SMC4 Structural maintenance of chromosomes protein 4 yes no 2;3 4.2542E-132 179.66 By MS/MS By MS/MS 2 2 35602000 14163000 21439000 3387 427 3635 7657;7658;7659;7660 6394;6395;6396;6397;6398;6399 6398 605;3359 6 TEVALAKDMESPTKLDVTLAK KDMALATKTEVALAKD KLDVTLAKDMQPSMES K T E A K D 3 0 0 2 0 0 2 0 0 0 3 3 1 0 1 1 3 0 0 2 0 0 21 2 2259.2032 E7EVA0;P27816;H7C456 E7EVA0 287 307 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.018961 49.036 By MS/MS By matching 1 1 3107400 1093900 2013500 3388 596 3636 7661;7662 6400 6400 812;3424 1 TFLDKDAQRLSPIPEEVPK EKLEKSKKTFLDKDAQ PIPEEVPKSTLESEKP K T F P K S 1 1 0 2 0 1 2 0 0 1 2 2 0 1 3 1 1 0 0 1 0 0 19 2 2182.1634 Q96T23;H0YER1;H0YCN2 Q96T23 594 612 RSF1 Remodeling and spacing factor 1 yes no 3 0.011482 54.582 By matching By MS/MS 1 1 9322600 5266400 4056200 3389 1933 3637 7663;7664 6401 6401 2738 1 TFLESKEELSHSPEPCTK KVESTSPKTFLESKEE HSPEPCTKMTMRLRRN K T F T K M 0 0 0 0 1 0 4 0 1 0 2 2 0 1 2 3 2 0 0 0 0 0 18 1 2117.9939 P41229 P41229 290 307 KDM5C Lysine-specific demethylase 5C yes yes 3 0.0035179 56.851 By matching By MS/MS 1 1 8855300 3941400 4913900 3390 1352 3638 7665;7666 6402 6402 1774 1 TFLNMFVDSNQDAR FYPAPGLKTFLNMFVD VDSNQDARRRSVNEDD K T F A R R 1 1 2 2 0 1 0 0 0 0 1 0 1 2 0 1 1 0 0 1 0 0 14 0 1656.7566 O60244 O60244 961 974 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 2 0.018951 46.606 By MS/MS 1 0 0 0 3391 1131 3639 7667 6403 6403 152;153 3610 1 TFNIKNDFTEEEEAQQGR KTPEEIRKTFNIKNDF EEEAQQGRIKT_____ K T F G R I 1 1 2 1 0 2 4 1 0 1 0 1 0 2 0 0 2 0 0 0 0 0 18 1 2154.9818 F8W8N3 F8W8N3 138 155 SKP1 yes yes 3 0.0071478 55.885 By MS/MS 1 0 0 0 3392 757 3640 7668 6404 6404 112;113 1 TFQARPLSADLTK AKPEVRRRTFQARPLS PLSADLTKLFSSSASS R T F T K L 2 1 0 1 0 1 0 0 0 0 2 1 0 1 1 1 2 0 0 0 0 0 13 1 1446.7831 Q9BY89 Q9BY89 501 513 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.011441 68.972 By MS/MS By MS/MS 1 1 5399000 2768200 2630800 3393 1977 3641 7669;7670 6405;6406 6406 2810 2 TFSDGLATR PSRQLVGRTFSDGLAT FSDGLATRTLQPPESP R T F T R T 1 1 0 1 0 0 0 1 0 0 1 0 0 1 0 1 2 0 0 0 0 0 9 0 966.47706 Q86UU1 Q86UU1 428 436 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 2 0.0097725 77.318 By matching By MS/MS 1 1 4392200 2083200 2309000 3394 1727 3642 7671;7672 6407 6407 2436 1 TFSEPGDHPGMLTSGKR SNGRSYKRTFSEPGDH GMLTSGKRSHLESSSR R T F K R S 0 1 0 1 0 0 1 3 1 0 1 1 1 1 2 2 2 0 0 0 0 0 17 1 1815.8574 Q9HA47 Q9HA47 251 267 UCK1 Uridine-cytidine kinase 1 yes yes 3 0.0074113 44.196 By matching By MS/MS 1 1 2337400 1253300 1084100 3395 2022 3643 7673;7674 6408 6408 292 2892 1 TFSHELSDFGLESTAGEIPVVAIR NFAVASRKTFSHELSD EIPVVAIRTAKGEKFV K T F I R T 2 1 0 1 0 0 3 2 1 2 2 0 0 2 1 3 2 0 0 2 0 0 24 0 2574.2966 P30101 P30101 306 329 PDIA3 Protein disulfide-isomerase A3 yes yes 3 0.00049059 63.165 By MS/MS By MS/MS 1 1 5183900 3009100 2174800 3396 1328 3644 7675;7676 6409;6410 6410 2 TFSTQIVR FVDLSVPRTFSTQIVR TFSTQIVRESEIPTSE R T F V R E 0 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 2 0 0 1 0 0 8 0 950.51853 Q8IVF2 Q8IVF2 5495 5502 AHNAK2 Protein AHNAK2 yes yes 2 0.010905 99.788 By MS/MS 1 8763500 0 8763500 3397 1750 3645 7677 6411 6411 431 2463 1 TFVNITPAEVGVLVGK VWAAVPGKTFVNITPA EVGVLVGKDRSSFYVN K T F G K D 1 0 1 0 0 0 1 2 0 1 1 1 0 1 1 0 2 0 0 4 0 0 16 0 1642.9294 I3L3D5;P07737 I3L3D5 118 133 PFN1 Profilin-1 yes no 2 0.010794 55.314 By MS/MS By MS/MS 1 1 5044700 2067700 2977000 3398 991 3646 7678;7679 6412;6413 6413 2 TGAACLPFYSAASYSALR CNCSSCRRTGAACLPF AASYSALRASLLPQSL R T G L R A 5 1 0 0 1 0 0 1 0 0 2 0 0 1 1 3 1 0 2 0 0 0 18 0 1904.9091 F5H5I6 F5H5I6 25 42 GRSF1 yes yes 3 0.010129 46.027 By MS/MS By matching 1 1 9434600 5518300 3916300 3399 717 3647 7680;7681 6414 6414 3474;4160 1 TGDLGIPPNPEDRSPSPEPIYNSEGK EDLTRKLRTGDLGIPP PIYNSEGKRLNTREFR R T G G K R 0 1 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 26 1 2765.3144 Q15637 Q15637 67 92 SF1 Splicing factor 1 yes yes 3 0.0030077 55.228 By MS/MS By MS/MS 1 2 32662000 16356000 16305000 3400 1561 3648 7682;7683;7684 6415;6416;6417;6418 6418 2152;2153 4 TGDLGIPPNPEDRSPSPEPIYNSEGKR EDLTRKLRTGDLGIPP IYNSEGKRLNTREFRT R T G K R L 0 2 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 27 2 2921.4155 Q15637 Q15637 67 93 SF1 Splicing factor 1 yes yes 3;4 4.7047E-06 67.979 By MS/MS By MS/MS 3 3 54484000 29896000 24588000 3401 1561 3649 7685;7686;7687;7688;7689;7690 6419;6420;6421;6422;6423;6424 6420 2152;2153 6 TGLYIAMNGEGYLYPSELFTPECK VVAIQGVKTGLYIAMN ELFTPECKFKESVFEN K T G C K F 1 0 1 0 1 0 3 3 0 1 3 1 1 1 2 1 2 0 3 0 0 0 24 0 2752.2764 Q92915 Q92915 121 144 FGF14 Fibroblast growth factor 14 yes yes 3 0.012227 49.528 By MS/MS By matching 1 1 2501500 1348500 1153000 3402 1867 3650 7691;7692 6425 6425 261 3876 1 TGSGIGNLQR GSQTALYRTGSGIGNL SGIGNLQRTSSQRSTL R T G Q R T 0 1 1 0 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1001.5254 A0A0D9SF60 A0A0D9SF60 445 454 PKP4 yes yes 2 0.001979 90.653 By MS/MS By MS/MS 1 1 1679400 740470 938880 3403 232 3651 7693;7694 6426;6427 6427 337 2 TGSGSPFAGNSPAR GTVKQTPKTGSGSPFA FAGNSPAREGEQDAAS K T G A R E 2 1 1 0 0 0 0 3 0 0 0 0 0 1 2 3 1 0 0 0 0 0 14 0 1304.6109 Q9UPT8;M0QY97 Q9UPT8 1265 1278 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 2 0.0038795 67.685 By MS/MS By matching 1 1 4202900 2115800 2087100 3404 2131 3652 7695;7696 6428 6428 3062 1 TGSVGIGNLQR GSQTALYRTGSVGIGN VGIGNLQRTSSQRSTL R T G Q R T 0 1 1 0 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1100.5938 Q99569 Q99569 445 455 PKP4 Plakophilin-4 yes yes 2 0.00020666 108.98 By MS/MS By MS/MS 1 1 5065500 2413100 2652400 3405 1939 3653 7697;7698 6429;6430 6430 2746 2 TGSYGALAEITASK TWRLGLRKTGSYGALA LAEITASKEGQKEKDT K T G S K E 3 0 0 0 0 0 1 2 0 1 1 1 0 0 0 2 2 0 1 0 0 0 14 0 1367.6933 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 443 456 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.0056726 62.338 By MS/MS 1 4470700 4470700 0 3406 1098 3654 7699 6431 6431 1462;4236 1 TGTGDIATCYSPR GEGHMPFRTGTGDIAT IATCYSPRTSTESFAP R T G P R T 1 1 0 1 1 0 0 2 0 1 0 0 0 0 1 1 3 0 1 0 0 0 13 0 1397.6245 Q9NZN5;E9PMR6 Q9NZN5 1317 1329 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2 1.1881E-06 97.631 By MS/MS By MS/MS 1 1 3236000 1251800 1984200 3407 2080 3655 7700;7701 6432;6433 6432 2988;3950 1 TGVAGEDMQDNSGTYGK IYQGFEKKTGVAGEDM DNSGTYGKIWEGSSKC K T G G K I 1 0 1 2 0 1 1 4 0 0 0 1 1 0 0 1 2 0 1 1 0 0 17 0 1728.7261 Q05655 Q05655 320 336 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2 0.0040326 54.343 By matching By MS/MS 1 1 6896100 3389700 3506400 3408 1465 3656 7702;7703 6434 6434 4330 1 TGVAGEDMQDNSGTYGKIWEGSSK IYQGFEKKTGVAGEDM KIWEGSSKCNINNFIF K T G S K C 1 0 1 2 0 1 2 5 0 1 0 2 1 0 0 3 2 1 1 1 0 0 24 1 2516.1125 Q05655 Q05655 320 343 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 3 0.011541 44.729 By matching By MS/MS 1 1 1749300 896140 853120 3409 1465 3657 7704;7705 6435 6435 1976;4330 1 TGVTSTSDSEEEGDDQEGEKKR SKRKNLAKTGVTSTSD DQEGEKKRKGGRNFQT K T G K R K 0 1 0 3 0 1 5 3 0 0 0 2 0 0 0 3 3 0 0 1 0 0 22 2 2383.0259 O75475 O75475 267 288 PSIP1 PC4 and SFRS1-interacting protein yes yes 2;3 5.7726E-45 130.11 By MS/MS By MS/MS 3 3 66665000 26346000 40320000 3410 1163 3658 7706;7707;7708;7709;7710;7711 6436;6437;6438;6439;6440;6441 6436 1552;1553;1554;3621 6 TGYESGEYEMLGEGLGVK DRIGKTKRTGYESGEY LGEGLGVKETPQQKYQ R T G V K E 0 0 0 0 0 0 4 5 0 0 2 1 1 0 0 1 1 0 2 1 0 0 18 0 1917.8666 F8VRV7;F8VW18;F8W1I6;Q13561;H0YHL1;F8VX93 F8VRV7 79 96 DCTN2 Dynactin subunit 2 yes no 2 0.0044452 53.557 By MS/MS By matching 1 1 1405300 590030 815290 3411 736 3659 7712;7713 6442 6442 4162 1 THINIVVIGHVDSGK ________________ IGHVDSGKSTTTGHLI K T H G K S 0 0 1 1 0 0 0 2 2 3 0 1 0 0 0 1 1 0 0 3 0 0 15 0 1587.8733 Q5VTE0;P68104;A0A087WV01;A0A087WVQ9;A6PW80;Q5JR01 Q5VTE0 6 20 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha no no 3 5.0721E-10 108.06 By MS/MS 1 976790 976790 0 3412 1438 3660 7714 6443 6443 1 THLTKLMHTVEQATLR KLSVNHRRTHLTKLMH TVEQATLRISQSFQKT R T H L R I 1 1 0 0 0 1 1 0 2 0 3 1 1 0 0 0 4 0 0 1 0 0 16 1 1878.0146 Q9HBW9 Q9HBW9 220 235 ELTD1 EGF, latrophilin and seven transmembrane domain-containing protein 1 yes yes 2 0.019837 49.5 By MS/MS 1 0 0 0 3413 2026 3661 7715 6444 6444 3932;3933;3934 1 THSTSSSLGSGESPFSR MTRLARSRTHSTSSSL SGESPFSRSVTSNQSD R T H S R S 0 1 0 0 0 0 1 2 1 0 1 0 0 1 1 7 2 0 0 0 0 0 17 0 1722.7809 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 234 250 NDRG3 Protein NDRG3 yes no 2;3 0.0038321 60.901 By MS/MS By MS/MS 2 2 18775000 8017300 10757000 3414 764 3662 7716;7717;7718;7719 6445;6446;6447 6447 1020;1021 3 THYPAQQGEYQTHQPVYHK PSFHQAQKTHYPAQQG THQPVYHKIQGDDWEP K T H H K I 1 0 0 0 0 4 1 1 3 0 0 1 0 0 2 0 2 0 3 1 0 0 19 0 2311.077 O95817;C9JFK9 O95817 231 249 BAG3 BAG family molecular chaperone regulator 3 yes no 4 0.010719 40.186 By MS/MS By matching 1 1 2575700 1246300 1329300 3415 1199 3663 7720;7721 6448 6448 4256 1 TIAATPIQTLPQSQSTPK SQPATPTRTIAATPIQ PQSQSTPKRIDTPSLE R T I P K R 2 0 0 0 0 3 0 0 0 2 1 1 0 0 3 2 4 0 0 0 0 0 18 0 1881.0207 A0A0C4DG88;P14859 A0A0C4DG88 163 180 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 2 0.0045383 61.212 By MS/MS By MS/MS 1 1 6012400 2565300 3447000 3416 207 3664 7722;7723 6449;6450 6449 299;300;3290 2 TIAHSPTSFTESSSK TVEHDENRTIAHSPTS SFTESSSKESQNTAEI R T I S K E 1 0 0 0 0 0 1 0 1 1 0 1 0 1 1 5 3 0 0 0 0 0 15 0 1578.7526 Q03164 Q03164 2094 2108 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 0.012477 48.351 By matching By MS/MS 1 1 2956000 1444100 1511900 3417 1459 3665 7724;7725 6451 6451 1958 1 TIASDSEEEAGKELSDK DKSGKREKTIASDSEE AGKELSDKKNEEKDLF K T I D K K 2 0 0 2 0 0 4 1 0 1 1 2 0 0 0 3 1 0 0 0 0 0 17 1 1807.8323 Q96ST2 Q96ST2 435 451 IWS1 Protein IWS1 homolog yes yes 2 5.9276E-06 99.844 By MS/MS By MS/MS 1 1 11067000 6764300 4302600 3418 1930 3666 7726;7727 6452;6453 6452 2729;2730 2 TIASDSEEEAGKELSDKK DKSGKREKTIASDSEE GKELSDKKNEEKDLFG K T I K K N 2 0 0 2 0 0 4 1 0 1 1 3 0 0 0 3 1 0 0 0 0 0 18 2 1935.9273 Q96ST2 Q96ST2 435 452 IWS1 Protein IWS1 homolog yes yes 3 0.0083316 59.618 By MS/MS By matching 1 1 6948400 3392200 3556200 3419 1930 3667 7728;7729 6454 6454 2729;2730 1 TIDLCNNPMTKEPK DASKKRAKTIDLCNNP NPMTKEPKLEAAVRIV K T I P K L 0 0 2 1 1 0 1 0 0 1 1 2 1 0 2 0 2 0 0 0 0 0 14 1 1659.796 H7BZG0;Q9NYU2 H7BZG0 65 78 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 2 0.020874 44.863 By MS/MS 1 0 0 0 3420 946 3668 7730 6455 6455 132;133 3537 1 TIETSPSLSR PKKVLDGKTIETSPSL ETSPSLSRMPNQHACK K T I S R M 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 3 2 0 0 0 0 0 10 0 1089.5666 H3BP78;F8W7R3;Q9NVI1 H3BP78 230 239 FANCI Fanconi anemia group I protein yes no 2 1.1782E-08 134.38 By MS/MS 1 5033100 0 5033100 3421 756 3669 7731 6456 6456 1010 1 TIGGGDDSFNTFFSETGAGK DGQMPSDKTIGGGDDS FSETGAGKHVPRAVFV K T I G K H 1 0 1 2 0 0 1 5 0 1 0 1 0 3 0 2 3 0 0 0 0 0 20 0 2006.8858 P68363;F5H5D3;Q9BQE3;Q71U36;F8VVB9;Q13748;F8VRK0;F8VX09;F8VWV9;F8VRZ4;F8VS66;F8VQQ4;Q6PEY2;F8VXZ7;F8W0F6 P68363 41 60 TUBA1B;TUBA1C;TUBA1A;TUBA3C;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3C/D chain;Tubulin alpha-3E chain yes no 2 0.00892 59.607 By MS/MS By matching 1 1 8342200 3685300 4656900 3422 1439 3670 7732;7733 6457 6457 1 TIQEVLEEQSEDEDREAK ARKQLPKRTIQEVLEE EDEDREAKRKKEEEEE R T I A K R 1 1 0 2 0 2 6 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 18 1 2146.9866 M0R0Q7;P18858 M0R0Q7 132 149 LIG1 DNA ligase;DNA ligase 1 yes no 2;3 6.658E-29 123.42 By MS/MS By MS/MS 2 2 70806000 36271000 34535000 3423 1073 3671 7734;7735;7736;7737 6458;6459;6460 6458 1415 3 TISATATTEPK LAPSIRTKTISATATT ATATTEPKPQLGTLIF K T I P K P 2 0 0 0 0 0 1 0 0 1 0 1 0 0 1 1 4 0 0 0 0 0 11 0 1118.5819 F5H7V9 F5H7V9 1155 1165 TNC yes yes 2 0.012404 73.781 By matching By MS/MS 1 1 2652700 1410900 1241700 3424 723 3672 7738;7739 6461 6461 962;3476 0 TISDGTISASK DYSQHIYRTISDGTIS DGTISASKQESGKMDA R T I S K Q 1 0 0 1 0 0 0 1 0 2 0 1 0 0 0 3 2 0 0 0 0 0 11 0 1078.5506 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 139 149 FNBP1L Formin-binding protein 1-like yes no 2 0.0061795 69.261 By MS/MS 1 2698800 0 2698800 3425 6 3673 7740 6462 6462 6 1 TISINQVLSNK VVDDEQVKTISINQVL INQVLSNKDLINYNKF K T I N K D 0 0 2 0 0 1 0 0 0 2 1 1 0 0 0 2 1 0 0 1 0 0 11 0 1215.6823 Q9ULW8 Q9ULW8 525 535 PADI3 Protein-arginine deiminase type-3 yes yes 2 0.011838 45.161 By MS/MS 1 2524100 0 2524100 3426 2124 3674 7741 6463 6463 320;321;460 3047;3960 1 TISNPEVVMK MPETSFTRTISNPEVV SNPEVVMKRRRQQKLE R T I M K R 0 0 1 0 0 0 1 0 0 1 0 1 1 0 1 1 1 0 0 2 0 0 10 0 1116.5849 A8MQ02;J3KN01;P55196;Q5TIG5;F8W9I4;E9PFY5 A8MQ02 173 182 MLLT4 Afadin yes no 2 0.018517 58.132 By MS/MS By matching 1 1 14797000 6904800 7892600 3427 338 3675 7742;7743 6464 6464 483 1 TISNPEVVMKR MPETSFTRTISNPEVV NPEVVMKRRRQQKLEK R T I K R R 0 1 1 0 0 0 1 0 0 1 0 1 1 0 1 1 1 0 0 2 0 0 11 1 1272.686 A8MQ02;J3KN01;P55196;Q5TIG5;F8W9I4;E9PFY5 A8MQ02 173 183 MLLT4 Afadin yes no 3 0.0032135 64.439 By MS/MS 1 0 0 0 3428 338 3676 7744 6465 6465 483 1 TISPPTLGTLR FESSKFTRTISPPTLG PPTLGTLRSCFSWSGG R T I L R S 0 1 0 0 0 0 0 1 0 1 2 0 0 0 2 1 3 0 0 0 0 0 11 0 1154.6659 Q9UQ84 Q9UQ84 596 606 EXO1 Exonuclease 1 yes yes 2 0.0044331 76.827 By MS/MS 1 0 0 0 3429 2135 3677 7745 6466 6466 3098 1 TISPSTSNNIPLMR PDHEDANRTISPSTSN SNNIPLMRVVQSVKHT R T I M R V 0 1 2 0 0 0 0 0 0 2 1 0 1 0 2 3 2 0 0 0 0 0 14 0 1529.7872 Q15139;F8WBA3;O94806 Q15139 395 408 PRKD1;PRKD3 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase;Serine/threonine-protein kinase D3 yes no 2 0.0019407 71.933 By MS/MS By MS/MS 2 2 7338100 3626500 3711600 3430 1545 3678;3679 7746;7747;7748;7749 6467;6468;6469 6468 219 2135 3 TISQSSSLK TEHGSRKRTISQSSSL ISQSSSLKSSSNSNKE R T I L K S 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 4 1 0 0 0 0 0 9 0 949.50803 Q9UHB7 Q9UHB7 834 842 AFF4 AF4/FMR2 family member 4 yes yes 2 0.013663 67.704 By MS/MS By matching 1 1 6039300 2959300 3080000 3431 2098 3680 7750;7751 6470 6470 3005 1 TITGNIYYARSGTK QEKLMTVRTITGNIYY YYARSGTKIIGKVHEK R T I T K I 1 1 1 0 0 0 0 2 0 2 0 1 0 0 0 1 3 0 2 0 0 0 14 1 1543.7995 A0A087WXK8;Q9H4H8 A0A087WXK8 253 266 FAM83D Protein FAM83D yes no 3 0.017188 44.511 By MS/MS 1 0 0 0 3432 74 3681 7752 6471 6471 12 3232;4011;4012 1 TITLEVEPSDTIENVK FVKTLTGKTITLEVEP SDTIENVKAKIQDKEG K T I V K A 0 0 1 1 0 0 3 0 0 2 1 1 0 0 1 1 3 0 0 2 0 0 16 0 1786.92 J3QSA3;F5GZ39;M0R1V7;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5PY61;Q96C32;P62987;P62979;P0CG47;P0CG48 J3QSA3 12 27 UBB;UBC;UBA52;RPS27A Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 2 0.0019611 72.652 By matching By MS/MS 1 1 3988400 1538000 2450400 3433 382 3682 7753;7754 6472 6472 1 TITVPVSGSPK KAVVPVSKTITVPVSG VPVSGSPKMSNIMQSI K T I P K M 0 0 0 0 0 0 0 1 0 1 0 1 0 0 2 2 2 0 0 2 0 0 11 0 1084.6128 E9PMC9;Q7Z589 E9PMC9 231 241 C11orf30;EMSY Protein EMSY yes no 2 0.0042794 75.739 By matching By MS/MS 1 1 2181400 1135900 1045400 3434 667 3683 7755;7756 6473 6473 901;902 1 TIVTTLQDSIR VLELRGLRTIVTTLQD TTLQDSIRKVTEENKE R T I I R K 0 1 0 1 0 1 0 0 0 2 1 0 0 0 0 1 3 0 0 1 0 0 11 0 1245.6929 CON__Q28194;P07996 CON__Q28194 289 299 THBS1 Thrombospondin-1 yes no 2 0.0041137 81.338 By MS/MS 1 958850 958850 0 + 3435 508 3684 7757 6474;6475 6475 2 TIYVRDPTSNK QPVRNTERTIYVRDPT VRDPTSNKQQRPVPES R T I N K Q 0 1 1 1 0 0 0 0 0 1 0 1 0 0 1 1 2 0 1 1 0 0 11 1 1292.6725 P07948;E5RJ37 P07948 30 40 LYN Tyrosine-protein kinase Lyn yes no 3 0.010214 59.265 By matching By MS/MS 1 1 1645800 868170 777670 3436 1235 3685 7758;7759 6476 6476 4261 1 TKEYVSNDAAQSDDEEKLQSQPTDTDGGR LTLHIMRRTKEYVSND PTDTDGGRLKQKTTQL R T K G R L 2 1 1 5 0 3 3 2 0 0 1 2 0 0 1 3 3 0 1 1 0 0 29 2 3183.4076 Q5JSH3;H7BY83 Q5JSH3 392 420 WDR44 WD repeat-containing protein 44 yes no 3;4 0.0006302 56.156 By MS/MS By matching 2 2 34369000 18751000 15619000 3437 1606 3686 7760;7761;7762;7763 6477;6478 6478 2227 2 TKFASDDEHDEHDENGATGPVK KVQFQGKKTKFASDDE NGATGPVKRAREETDK K T K V K R 2 0 1 4 0 0 3 2 2 0 0 2 0 1 1 1 2 0 0 1 0 0 22 1 2398.0309 P05455 P05455 362 383 SSB Lupus La protein yes yes 3;4 0.0008308 80.109 By MS/MS By MS/MS 3 3 34985000 16183000 18802000 3438 1222 3687;3688 7764;7765;7766;7767;7768;7769 6479;6480;6481;6482;6483 6480 163 1614 5 TKFASDDEHDEHDENGATGPVKR KVQFQGKKTKFASDDE GATGPVKRAREETDKE K T K K R A 2 1 1 4 0 0 3 2 2 0 0 2 0 1 1 1 2 0 0 1 0 0 23 2 2554.132 P05455 P05455 362 384 SSB Lupus La protein yes yes 3;4 1.9753E-06 93.196 By MS/MS By MS/MS 5 5 287110000 120890000 166210000 3439 1222 3689;3690 7770;7771;7772;7773;7774;7775;7776;7777;7778;7779 6484;6485;6486;6487;6488;6489;6490 6489 163 1614 7 TKSNSLSEQLAINTSPDAVK KSGEPALRTKSNSLSE NTSPDAVKAKLISRMA R T K V K A 2 0 2 1 0 1 1 0 0 1 2 2 0 0 1 4 2 0 0 1 0 0 20 1 2102.0855 A0A0A0MT60;Q5T1M5;X6RKW4 A0A0A0MT60 367 386 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 3 0.0079812 49.066 By matching By MS/MS 1 1 3819700 2262000 1557800 3440 174 3691 7780;7781 6491 6491 242;243 1 TLATQLNQQKMLVSEIEMK ENQPENSKTLATQLNQ LVSEIEMKQSKMDECQ K T L M K Q 1 0 1 0 0 3 2 0 0 1 3 2 2 0 0 1 2 0 0 1 0 0 19 1 2204.1545 Q6P0N6;E7ETB9;E9PHM6;F6QMI7;F8W9J4;Q03001 Q6P0N6 1000 1018 DST Dystonin yes no 4 0.020116 46.121 By MS/MS 1 331180 0 331180 3441 589 3692 7782 6492 6492 787 0 TLDFDPLLSPASPK ACGATLKRTLDFDPLL LLSPASPKRRRCAPLS R T L P K R 1 0 0 2 0 0 0 0 0 0 3 1 0 1 3 2 1 0 0 0 0 0 14 0 1499.7872 Q53H80 Q53H80 10 23 AKIRIN2 Akirin-2 yes yes 2 3.7853E-14 122.63 By MS/MS By MS/MS 1 1 7891000 3131600 4759400 3442 1598 3693 7783;7784 6493;6494 6494 2217 2 TLDSGTSEIVKSPR SSLEEKQRTLDSGTSE SEIVKSPRIECSKTRR R T L P R I 0 1 0 1 0 0 1 1 0 1 1 1 0 0 1 3 2 0 0 1 0 0 14 1 1488.7784 Q9H501 Q9H501 187 200 ESF1 ESF1 homolog yes yes 2 0.00094471 77.324 By MS/MS By MS/MS 1 1 19287000 8751100 10536000 3443 2008 3694 7785;7786 6495;6496 6496 2871 2 TLEPVKPPTVPNDYMTSPAR LGRNTPYKTLEPVKPP DYMTSPARLGSQHSPG K T L A R L 1 1 1 1 0 0 1 0 0 0 1 1 1 0 5 1 3 0 1 2 0 0 20 1 2212.1198 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 200 219 ABI1 Abl interactor 1 yes no 3 0.0047819 85.563 By MS/MS By MS/MS 3 3 7933400 4024400 3908900 3444 152 3695;3696 7787;7788;7789;7790;7791;7792 6497;6498;6499;6500 6500 22 208;3264;4027 4 TLFLGVTNLQAK DALTGMVKTLFLGVTN GVTNLQAKHVEMTSLC K T L A K H 1 0 1 0 0 1 0 1 0 0 3 1 0 1 0 0 2 0 0 1 0 0 12 0 1303.75 Q05707;J3QT83 Q05707 917 928 COL14A1 Collagen alpha-1(XIV) chain yes no 2 0.005529 71.451 By MS/MS By matching 1 1 1052700 675740 376930 3445 1466 3697 7793;7794 6501 6501 1 TLHCEGTEINSDDEQESK PFKTKKIKTLHCEGTE SDDEQESKEVEETATA K T L S K E 0 0 1 2 1 1 4 1 1 1 1 1 0 0 0 2 2 0 0 0 0 0 18 0 2090.8699 Q9BPX3;H0Y9Z8 Q9BPX3 664 681 NCAPG Condensin complex subunit 3 yes no 2;3 4.9051E-30 125.75 By MS/MS By MS/MS 1 2 29875000 6734400 23141000 3446 1950 3698 7795;7796;7797 6502;6503 6503 2763 2 TLKTEAKSFLSQYR KQLPFTPRTLKTEAKS KSFLSQYRYYTPAKRK R T L Y R Y 1 1 0 0 0 1 1 0 0 0 2 2 0 1 0 2 2 0 1 0 0 0 14 2 1670.8992 Q9P0W8 Q9P0W8 244 257 SPATA7 Spermatogenesis-associated protein 7 yes yes 2 0.0096367 50.452 By matching By MS/MS 1 1 18935000 8295500 10639000 3447 2084 3699 7798;7799 6504 6504 452 4451 1 TLLQRSVQR GLGEAEVRTLLQRSVQ LLQRSVQRLPAGWTRV R T L Q R L 0 2 0 0 0 2 0 0 0 0 2 0 0 0 0 1 1 0 0 1 0 0 9 1 1099.6462 A0A0J9YXM6;Q562E7 A0A0J9YXM6 89 97 WDR81 WD repeat-containing protein 81 yes no 2 0.014715 57.047 By MS/MS 1 0 0 0 3448 256 3700 7800 6505 6505 1 TLLSESSSQSSKSPSLSSK LDSLGRKKTLLSESSS KSPSLSSKQQHQPSAS K T L S K Q 0 0 0 0 0 1 1 0 0 0 3 2 0 0 1 10 1 0 0 0 0 0 19 1 1938.9746 Q9UPU5 Q9UPU5 1129 1147 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 3 0.0037826 57.788 By MS/MS By MS/MS 1 1 7305900 3074700 4231200 3449 2132 3701 7801;7802 6506;6507 6506 3064;3065 2 TLNAETPKSSPLPAK LLDEEVSRTLNAETPK KSSPLPAKGRDPVEIL R T L A K G 2 0 1 0 0 0 1 0 0 0 2 2 0 0 3 2 2 0 0 0 0 0 15 1 1552.8461 Q7L2J0 Q7L2J0 208 222 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2;3 3.0592E-22 135.61 By MS/MS By MS/MS 2 2 26538000 10841000 15697000 3450 1703 3702 7803;7804;7805;7806 6508;6509;6510;6511 6510 2379;2380 4 TLNMTTSPEEK TPRKRISKTLNMTTSP MTTSPEEKRKIIGDTF K T L E K R 0 0 1 0 0 0 2 0 0 0 1 1 1 0 1 1 3 0 0 0 0 0 11 0 1249.586 P49915 P49915 326 336 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 0.00058979 104.41 By MS/MS By MS/MS 1 1 16357000 7628000 8728800 3451 1386 3703 7807;7808 6512;6513 6512 1867;3705 2 TLNMTTSPEEKR TPRKRISKTLNMTTSP TTSPEEKRKIIGDTFV K T L K R K 0 1 1 0 0 0 2 0 0 0 1 1 1 0 1 1 3 0 0 0 0 0 12 1 1405.6871 P49915 P49915 326 337 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 0.0027387 97.273 By MS/MS 1 1442300 0 1442300 3452 1386 3704 7809 6514 6514 1867;3705 1 TLNNCHRSR SIRCPHNRTLNNCHRS LNNCHRSRFRVPLLHC R T L S R F 0 2 2 0 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 9 1 1156.552 P12724 P12724 94 102 RNASE3 Eosinophil cationic protein yes yes 2 0.01836 45.68 By MS/MS 1 2516000 2516000 0 3453 1265 3705 7810 6515 6515 174;175 0 TLNNDIMLIK RHPQYDRKTLNNDIML NNDIMLIKLSSRAVIN K T L I K L 0 0 2 1 0 0 0 0 0 2 2 1 1 0 0 0 1 0 0 0 0 0 10 0 1173.6427 A6XGL3;CON__P07477;E7EQ64;P07477;H0Y8D1;A0A087WW55 A6XGL3 93 102 PRSS1 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2 yes no 2 0.0084965 94.309 By matching By MS/MS 1 1 5096300 1933300 3163000 + 3454 336 3706 7811;7812 6516 6516 48 1 TLNQPDSQLQLTTGNGLFLSEGLK EGFQELLRTLNQPDSQ LFLSEGLKLVDKFLED R T L L K L 0 0 2 1 0 3 1 3 0 0 6 1 0 1 1 2 3 0 0 0 0 0 24 0 2573.3337 A0A0G2JRN3;A0A024R6I7;P01009;G3V2B9;G3V544 A0A0G2JRN3 126 149 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2;3 0.00064883 70.569 By MS/MS By matching 3 3 35542000 17906000 17637000 3455 1 3707;3708 7813;7814;7815;7816;7817;7818 6517;6518;6519 6518 0 3 TLNQQLTNHIR MGTPHLQKTLNQQLTN QQLTNHIRESLPALRS K T L I R E 0 1 2 0 0 2 0 0 1 1 2 0 0 0 0 0 2 0 0 0 0 0 11 0 1336.7211 K7EMQ3;P50570 K7EMQ3 32 42 DNM2 Dynamin-2 yes no 2 0.013923 44.349 By MS/MS 1 0 0 0 3456 1046 3709 7819 6520 6520 143 3578 1 TLQKINESR LKEIETQKTLQKINES LQKINESRSWFFERIN K T L S R S 0 1 1 0 0 1 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 9 1 1087.5986 O00370 O00370 355 363 LINE-1 retrotransposable element ORF2 protein;Reverse transcriptase;Endonuclease yes yes 2 0.0037778 85.355 By MS/MS 1 5821800 5821800 0 3457 1084 3710 7820 6521 6521 148;397 1425 1 TLSASAAEVAPR EGLRLKERTLSASAAE SAAEVAPRAVSVGSQP R T L P R A 4 1 0 0 0 0 1 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 12 0 1171.6197 Q16825 Q16825 656 667 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 yes yes 2 0.0062445 66.989 By MS/MS By MS/MS 1 2 1726200 781340 944830 3458 1575 3711 7821;7822;7823 6522;6523 6522 2179 2 TLSASTQDLSPH WHLDKAPRTLSASTQD STQDLSPH________ R T L P H - 1 0 0 1 0 1 0 0 1 0 2 0 0 0 1 3 2 0 0 0 0 0 12 0 1255.6044 Q6P597 Q6P597 493 504 KLC3 Kinesin light chain 3 yes yes 2 0.0012811 93.839 By MS/MS By MS/MS 3 2 4971800 2349000 2622900 3459 1679 3712 7824;7825;7826;7827;7828 6524;6525;6526;6527 6525 2350;2351 4 TLSDESICSNR SPRRSLYRTLSDESIC DESICSNRRGSSFGSS R T L N R R 0 1 1 1 1 0 1 0 0 1 1 0 0 0 0 3 1 0 0 0 0 0 11 0 1280.5667 Q9P2F8 Q9P2F8 1486 1496 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 2 0.0061795 69.261 By matching By MS/MS 1 1 2933100 1445700 1487400 3460 2089 3713 7829;7830 6528 6528 2995 1 TLSDESIYNSQR TSRRALHRTLSDESIY ESIYNSQREHFFTSRA R T L Q R E 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 3 1 0 1 0 0 0 12 0 1411.6579 O43166;F5GYF8 O43166 1583 1594 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 0.0018384 79.466 By MS/MS By MS/MS 1 1 6225300 3133700 3091600 3461 1114 3714 7831;7832 6529;6530 6530 1484 2 TLSDESLCSGR SPQKGLQRTLSDESLC DESLCSGRREPSFASP R T L G R R 0 1 0 1 1 0 1 1 0 0 2 0 0 0 0 3 1 0 0 0 0 0 11 0 1223.5452 M0R2Q7;O60292 M0R2Q7 148 158 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 yes no 2 0.00071198 103.26 By MS/MS By MS/MS 1 1 2493900 1060300 1433700 3462 1075 3715 7833;7834 6531;6532 6532 1418 2 TLSEVDYAPAGPAR CSVLQMAKTLSEVDYA YAPAGPARSALLPGPL K T L A R S 3 1 0 1 0 0 1 1 0 0 1 0 0 0 2 1 1 0 1 1 0 0 14 0 1445.7151 A0A0A0MTP6;O15357;H0YFZ4 A0A0A0MTP6 1063 1076 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 0.00014657 85.958 By matching By MS/MS 1 1 23357000 11183000 12174000 3463 182 3716 7835;7836 6533 6533 4031 1 TLSMDKGF ELEHVTRRTLSMDKGF TLSMDKGF________ R T L G F - 0 0 0 1 0 0 0 1 0 0 1 1 1 1 0 1 1 0 0 0 0 0 8 1 897.4266 P17858 P17858 773 780 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 1;2 0.010166 67.726 By MS/MS By MS/MS 2 2 7477900 3393400 4084500 3464 1286 3717;3718 7837;7838;7839;7840 6534;6535;6536 6536 165 1687 3 TLSMIEEEIR KLRSRKQRTLSMIEEE SMIEEEIRAAQEREEE R T L I R A 0 1 0 0 0 0 3 0 0 2 1 0 1 0 0 1 1 0 0 0 0 0 10 0 1219.6118 Q9Y2D5;C9JVY5 Q9Y2D5 718 727 AKAP2 A-kinase anchor protein 2 yes no 2 0.021151 65.395 By MS/MS By matching 1 1 1449300 1136300 313000 3465 2142 3719 7841;7842 6537 6537 311 3109 1 TLSNAEDYLDDEDSD KQGTDAVRTLSNAEDY YLDDEDSD________ R T L S D - 1 0 1 5 0 0 2 0 0 0 2 0 0 0 0 2 1 0 1 0 0 0 15 0 1700.6537 Q92882 Q92882 200 214 OSTF1 Osteoclast-stimulating factor 1 yes yes 2 0.0015927 70.889 By matching By MS/MS 1 1 5685200 2234400 3450800 3466 1864 3720 7843;7844 6538 6538 2634 1 TLSSSAQEDIIR LRNQGVVRTLSSSAQE SAQEDIIRWFKEEQLP R T L I R W 1 1 0 1 0 1 1 0 0 2 1 0 0 0 0 3 1 0 0 0 0 0 12 0 1318.6729 Q9H788 Q9H788 313 324 SH2D4A SH2 domain-containing protein 4A yes yes 2 2.4927E-08 114.72 By MS/MS By MS/MS 1 1 11436000 5357100 6078800 3467 2015 3721 7845;7846 6539;6540 6540 2881 2 TLSSSSMDLSR GTGLSDSRTLSSSSMD SSSMDLSRRSSLVG__ R T L S R R 0 1 0 1 0 0 0 0 0 0 2 0 1 0 0 5 1 0 0 0 0 0 11 0 1182.5551 Q9H0B6 Q9H0B6 606 616 KLC2 Kinesin light chain 2 yes yes 2 8.8511E-06 123.95 By MS/MS By MS/MS 1 1 10492000 4980800 5511300 3468 1988 3722 7847;7848 6541;6542 6542 2838 2 TLSTSDDVEDRENEK GLLISVIRTLSTSDDV VEDRENEKGRLEEAYE R T L E K G 0 1 1 3 0 0 3 0 0 0 1 1 0 0 0 2 2 0 0 1 0 0 15 1 1736.7701 Q96A65 Q96A65 30 44 EXOC4 Exocyst complex component 4 yes yes 2 0.016793 58.723 By MS/MS By matching 1 1 5700300 2602500 3097800 3469 1873 3723 7849;7850 6543 6543 2646 1 TLSVAAAFNEDEDSEPEEMPPEAK TVPTLAPKTLSVAAAF EEMPPEAKMRMKNIGR K T L A K M 4 0 1 2 0 0 6 0 0 0 1 1 1 1 3 2 1 0 0 1 0 0 24 0 2605.1378 Q8WW12 Q8WW12 106 129 PCNP PEST proteolytic signal-containing nuclear protein yes yes 3 9.3362E-05 71.528 By MS/MS 1 7376900 7376900 0 3470 1838 3724 7851 6544 6544 262 2586 1 TLTDEVNSPDSDRR RRKKISAKTLTDEVNS NSPDSDRRDKKGGNYK K T L R R D 0 2 1 3 0 0 1 0 0 0 1 0 0 0 1 2 2 0 0 1 0 0 14 1 1603.7438 F8VXC8;Q8TAQ2 F8VXC8 276 289 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2;3 0.0006458 86.498 By MS/MS By MS/MS 2 2 41555000 22375000 19179000 3471 747 3725 7852;7853;7854;7855 6545;6546;6547 6547 992 3 TLTGDVKTSPPR KRSEGEEKTLTGDVKT DVKTSPPRTAPKKQL_ K T L P R T 0 1 0 1 0 0 0 1 0 0 1 1 0 0 2 1 3 0 0 1 0 0 12 1 1270.6881 H3BSX7;H3BNB8;H3BVH0;H3BRV2;H3BM79;Q9H8T0 H3BSX7 22 33 AKTIP AKT-interacting protein yes no 2 0.0060145 93.649 By matching By MS/MS 1 1 3184300 1044000 2140300 3472 904 3726 7856;7857 6548 6548 1212;3530 1 TLTLPAASASSSPR TWPPELSRTLTLPAAS ASASSSPRPLLTGLRL R T L P R P 3 1 0 0 0 0 0 0 0 0 2 0 0 0 2 4 2 0 0 0 0 0 14 0 1357.7201 Q8IZF5 Q8IZF5 144 157 GPR113 Probable G-protein coupled receptor 113 yes yes 2 0.019835 48.44 By MS/MS 1 1000700 0 1000700 3473 1768 3727 7858 6549 6549 2486;3851;3852 1 TLTYFNYDQSGDFQTVTFEGPEIR VILDNGGKTLTYFNYD TFEGPEIRKIFYGSFH K T L I R K 0 1 1 2 0 2 2 2 0 1 1 0 0 3 1 1 4 0 2 1 0 0 24 0 2827.2977 Q05707;A0A0A0MQT7 Q05707 1327 1350 COL14A1 Collagen alpha-1(XIV) chain yes no 3 4.8469E-21 110.4 By MS/MS By MS/MS 1 1 35163000 14490000 20674000 3474 1466 3728 7859;7860 6550;6551 6550 2 TLVITSTPASPNR QAEVTALKTLVITSTP STPASPNRELHPQLLS K T L N R E 1 1 1 0 0 0 0 0 0 1 1 0 0 0 2 2 3 0 0 1 0 0 13 0 1355.7409 E9PK89;Q8TBN0 E9PK89 206 218 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A yes no 2 0.0036549 70.438 By MS/MS By MS/MS 1 1 1108500 658700 449810 3475 651 3729 7861;7862 6552;6553 6552 885 2 TLVLSNLSYSATEETLQEVFEK STWSGESKTLVLSNLS TLQEVFEKATFIKVPQ K T L E K A 1 0 1 0 0 1 4 0 0 0 4 1 0 1 0 3 3 0 1 2 0 0 22 0 2500.2585 P19338;H7BY16 P19338 487 508 NCL Nucleolin yes no 2;3 1.0744E-71 135.26 By MS/MS By MS/MS 2 2 29228000 14688000 14541000 3476 1294 3730 7863;7864;7865;7866 6554;6555;6556;6557 6556 4 TLYSFFSPSPAR ________________ FFSPSPARKRHAPSPE K T L A R K 1 1 0 0 0 0 0 0 0 0 1 0 0 2 2 3 1 0 1 0 0 0 12 0 1371.6823 P13051 P13051 6 17 UNG Uracil-DNA glycosylase yes yes 2 0.00090426 79.148 By MS/MS By MS/MS 1 1 672240 336360 335870 3477 1267 3731 7867;7868 6558;6559 6559 4268 2 TMFAQVESDDEEAKNEPEWK AYSKTQPKTMFAQVES AKNEPEWKKRKI____ K T M W K K 2 0 1 2 0 1 5 0 0 0 0 2 1 1 1 1 1 1 0 1 0 0 20 1 2382.0322 Q9NW82 Q9NW82 631 650 WDR70 WD repeat-containing protein 70 yes yes 3 0.011723 47.088 By MS/MS By matching 1 1 7975200 3791900 4183300 3478 2062 3732 7869;7870 6560 6560 2947 1 TMKNIEVPETK VETLHITKTMKNIEVP NIEVPETKTASFECEV K T M T K T 0 0 1 0 0 0 2 0 0 1 0 2 1 0 1 0 2 0 0 1 0 0 11 1 1288.6697 A0A0A0MTS7;Q8WZ42;A0A0A0MRA3 A0A0A0MTS7 2887 2897 TTN Titin yes no 3 0.017892 48.981 By MS/MS 1 0 0 0 3479 186 3733 7871 6561 6561 3284 1 TMSVSDFNYSR SINEIPERTMSVSDFN VSDFNYSRTSPSKRPN R T M S R T 0 1 1 1 0 0 0 0 0 0 0 0 1 1 0 3 1 0 1 1 0 0 11 0 1305.566 Q96RT1;H0YA04 Q96RT1 1156 1166 ERBB2IP Protein LAP2 yes no 2 0.0025346 84.213 By MS/MS By matching 1 1 2977500 1397200 1580300 3480 1927 3734 7872;7873 6562 6562 2720 1 TMTANKNSSITHGAGGTK ________________ THGAGGTKAPRGTLS_ M T M T K A 2 0 2 0 0 0 0 3 1 1 0 2 1 0 0 2 4 0 0 0 0 0 18 1 1774.8632 E9PQM5;E9PPS6;E9PM32;E9PJP0;E9PLD7;E9PRS6;E9PI67;E9PI72;E9PKV3;E9PI58;E9PLB6;E9PII1;E9PK36;E9PN93;E9PME1;E9PQA9;E9PNM8;E9PMP1;E9PLH6;E9PMJ9;E9PKN3;E9PJY5;P78524 E9PQM5 2 19 ST5 Suppression of tumorigenicity 5 protein yes no 3 0.016299 49.343 By matching By MS/MS 1 1 1527800 856490 671350 3481 637 3735 7874;7875 6563 6563 96 3439;3440 1 TNDIETLKGEQMK LQKEIEERTNDIETLK TLKGEQMKLQGVIKSL R T N M K L 0 0 1 1 0 1 2 1 0 1 1 2 1 0 0 0 2 0 0 0 0 0 13 1 1505.7396 A0A087WVY5;Q96MR6 A0A087WVY5 914 926 CFAP57 Cilia- and flagella-associated protein 57 yes no 2 0.012277 50.194 By MS/MS 1 434250 0 434250 3482 56 3736 7876 6564 6564 9 3226;3227 1 TNEKVELQELNDR NTEFKNTRTNEKVELQ ELQELNDRFANYIDKV R T N D R F 0 1 2 1 0 1 3 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 13 1 1586.79 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;P17661 P08670 101 113 VIM;DES Vimentin;Desmin yes no 3 0.0023164 67.095 By MS/MS By MS/MS 1 1 4263000 2104500 2158400 3483 1243 3737 7877;7878 6565;6566 6566 2 TNKSPEAKPLPGK LGSVEAPKTNKSPEAK EAKPLPGKLPKGISAG K T N G K L 1 0 1 0 0 0 1 1 0 0 1 3 0 0 3 1 1 0 0 0 0 0 13 2 1365.7616 P46087;F5H359;F5GWB7;F5H709;F5H5X6 P46087 64 76 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 3 0.00061213 80.508 By MS/MS By MS/MS 1 1 3874100 1967800 1906300 3484 1363 3738 7879;7880 6567;6568 6567 1796 2 TNLQPLESTQSQDF LNHMYKLRTNLQPLES ESTQSQDF________ R T N D F - 0 0 1 1 0 3 1 0 0 0 2 0 0 1 1 2 2 0 0 0 0 0 14 0 1606.7475 Q9Y248 Q9Y248 172 185 GINS2 DNA replication complex GINS protein PSF2 yes yes 2 0.0093029 46.844 By MS/MS By matching 1 1 1345600 821550 524060 3485 2141 3739 7881;7882 6569 6569 326;462;463 3104 1 TNLSGRQSPSFK EEKEVLLKTNLSGRQS GRQSPSFKLSLSSGTK K T N F K L 0 1 1 0 0 1 0 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 12 1 1320.6786 Q6IN85 Q6IN85 734 745 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 2;3 0.0068353 74.537 By MS/MS By MS/MS 2 2 10088000 6011600 4076200 3486 1668 3740 7883;7884;7885;7886 6570;6571;6572 6570 2330;2331 3 TNNNQILEVKSPIK EPPPPLLKTNNNQILE LEVKSPIKQSKSDKQI K T N I K Q 0 0 3 0 0 1 1 0 0 2 1 2 0 0 1 1 1 0 0 1 0 0 14 1 1596.8835 A0A0D9SF09;B1APT5;P42568 A0A0D9SF09 67 80 MLLT3 Protein AF-9 yes no 3 0.0024918 66.289 By MS/MS By matching 1 1 2496900 1309700 1187300 3487 227 3741 7887;7888 6573 6573 327 1 TNSMGSATGPLPGTK SKGSKRVRTNSMGSAT TGPLPGTKVEPTVLDR R T N T K V 1 0 1 0 0 0 0 3 0 0 1 1 1 0 2 2 3 0 0 0 0 0 15 0 1417.6871 O15014 O15014 465 479 ZNF609 Zinc finger protein 609 yes yes 2 0.018398 50.874 By MS/MS By matching 1 1 2934200 1565300 1368800 3488 1099 3742 7889;7890 6574 6574 1467 1 TNSMSSSGLGSPNR QGIGIPSRTNSMSSSG SGLGSPNRSSPSIICM R T N N R S 0 1 2 0 0 0 0 2 0 0 1 0 1 0 1 5 1 0 0 0 0 0 14 0 1393.6256 F8VQD8;A0A087X050;F8VVY1;F8VUB4;F8VX63;F8VP97;F8VV52;Q9NZN8 F8VQD8 70 83 CNOT2 CCR4-NOT transcription complex subunit 2 yes no 2 1.8858E-16 129 By MS/MS By MS/MS 3 3 13057000 6705500 6351700 3489 94 3743;3744 7891;7892;7893;7894;7895;7896 6575;6576;6577;6578 6575 14 118;119 4 TNSPGFQK FDKPNFNRTNSPGFQK TNSPGFQKKVQFGNEN R T N Q K K 0 0 1 0 0 1 0 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 8 0 877.42938 A0A087X0H9;Q5T8P6 A0A087X0H9 521 528 RBM26 RNA-binding protein 26 yes no 2 0.0059163 126.39 By MS/MS By MS/MS 2 2 8264500 4246900 4017600 3490 98 3745 7897;7898;7899;7900 6579;6580 6580 127 2 TNSSSSSPVVLK EKPRKRRRTNSSSSSP SSSPVVLKEVPKAVVP R T N L K E 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 5 1 0 0 2 0 0 12 0 1204.6299 E9PMC9;Q7Z589 E9PMC9 208 219 C11orf30;EMSY Protein EMSY yes no 2 0.00258 74.853 By MS/MS By MS/MS 1 1 4031800 2085700 1946100 3491 667 3746 7901;7902 6581;6582 6582 903 2 TNSVKTTLSERYTPTSQLR DSLTPFVRTNSVKTTL YTPTSQLRTQEDAKEW R T N L R T 0 2 1 0 0 1 1 0 0 0 2 1 0 0 1 3 5 0 1 1 0 0 19 2 2181.139 E9PNV5 E9PNV5 533 551 NAV2 yes yes 3 0.0062559 51.495 By MS/MS By matching 1 1 5181800 2555500 2626300 3492 674 3747 7903;7904 6583 6583 377 912;913 1 TNTMNGSKSPVISR PTRKPWERTNTMNGSK SKSPVISRPKSTPLSQ R T N S R P 0 1 2 0 0 0 0 1 0 1 0 1 1 0 1 3 2 0 0 1 0 0 14 1 1490.7511 A0A0U1RRM6;Q8N8S7 A0A0U1RRM6 732 745 ENAH Protein enabled homolog yes no 2 0.0033341 62.69 By MS/MS By MS/MS 1 1 2364800 980470 1384300 3493 278 3748 7905;7906 6584;6585 6585 46;47 393;394;3310;3311 2 TNTMNGSKSPVISRPK PTRKPWERTNTMNGSK SPVISRPKSTPLSQPS R T N P K S 0 1 2 0 0 0 0 1 0 1 0 2 1 0 2 3 2 0 0 1 0 0 16 2 1715.8989 A0A0U1RRM6 A0A0U1RRM6 732 747 yes yes 3 0.00032927 77.554 By MS/MS By MS/MS 5 6 37717000 17865000 19852000 3494 278 3749;3750;3751;3752;3753 7907;7908;7909;7910;7911;7912;7913;7914;7915;7916;7917 6586;6587;6588;6589;6590;6591;6592;6593 6587 46;47 43 393;394;3310;3311 7 TNTPVKEDWNVR TTEVTQPRTNTPVKED VKEDWNVRITKLRKQV R T N V R I 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 0 2 1 0 2 0 0 12 1 1457.7263 P78347 P78347 556 567 GTF2I General transcription factor II-I yes yes 3 0.0054634 81.676 By MS/MS By MS/MS 1 1 4108300 2117100 1991100 3495 1442 3754 7918;7919 6594;6595 6595 3719 2 TPAAAAAMNLASPR AVNLADSRTPAAAAAM AMNLASPRTAVAPSAV R T P P R T 6 1 1 0 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 0 0 14 0 1340.6871 Q9UQ35 Q9UQ35 2261 2274 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 3.632E-60 163.41 By MS/MS By MS/MS 4 4 43080000 19530000 23550000 3496 2134 3755;3756 7920;7921;7922;7923;7924;7925;7926;7927 6596;6597;6598;6599;6600;6601;6602;6603;6604;6605;6606;6607 6601 310 3096 12 TPAAPASPAAVPSEGSGGSTTGWR RARNAAPRTPAAPASP GGSTTGWRAREEQPPS R T P W R A 5 1 0 0 0 0 1 4 0 0 0 0 0 0 4 4 3 1 0 1 0 0 24 0 2211.0556 P07199 P07199 150 173 CENPB Major centromere autoantigen B yes yes 2;3 0.0044092 55.453 By MS/MS By MS/MS 2 2 22239000 10181000 12059000 3497 1230 3757 7928;7929;7930;7931 6608;6609;6610 6610 1624;3642 3 TPAPPEPGSPAPGEGPSGR ETLSPPRRTPAPPEPG PGEGPSGRKRRRVPRD R T P G R K 2 1 0 0 0 0 2 4 0 0 0 0 0 0 7 2 1 0 0 0 0 0 19 0 1756.838 P0C1Z6 P0C1Z6 172 190 TFPT TCF3 fusion partner yes yes 2 0.0097506 53.21 By MS/MS By matching 1 1 2457200 1437900 1019400 3498 1245 3758 7932;7933 6611 6611 1645 1 TPASTPVSGTPQASPMIER MNMIEEIKTPASTPVS QASPMIERSNVVRKDY K T P E R S 2 1 0 0 0 1 1 1 0 1 0 0 1 0 4 3 3 0 0 1 0 0 19 0 1925.9517 Q9UHR4 Q9UHR4 248 266 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 0.0078598 54.768 By matching By MS/MS 1 1 2273500 871070 1402500 3499 2099 3759 7934;7935 6612 6612 3006 1 TPDGQYIYRLEPNVEELCR SLTYRQERTPDGQYIY PNVEELCRFPELPARK R T P C R F 0 2 1 1 1 1 3 1 0 1 2 0 0 0 2 0 1 0 2 1 0 0 19 1 2351.1216 E7EXA6;A0A0D9SF58;Q8WVB6 E7EXA6 808 826 CHTF18 Chromosome transmission fidelity protein 18 homolog yes no 3 0.017907 41.115 By MS/MS 1 452480 0 452480 3500 231 3760 7936 6613 6613 37 3297;4037 0 TPDTSTYCYETAEK ETSTKTTRTPDTSTYC YCYETAEKITRTPQAS R T P E K I 1 0 0 1 1 0 2 0 0 0 0 1 0 0 1 1 4 0 2 0 0 0 14 0 1664.6876 P46821 P46821 2034 2047 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.00012372 93.839 By MS/MS By MS/MS 2 2 12530000 6204000 6326000 3501 1367 3761;3762 7937;7938;7939;7940 6614;6615;6616 6616 3693;4301;4302 3 TPDTSTYCYETAEKITR ETSTKTTRTPDTSTYC ETAEKITRTPQASTYS R T P T R T 1 1 0 1 1 0 2 0 0 1 0 1 0 0 1 1 5 0 2 0 0 0 17 1 2034.9204 P46821 P46821 2034 2050 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.0020264 65.477 By MS/MS By matching 2 2 7373700 4507800 2865900 3502 1367 3763;3764 7941;7942;7943;7944 6617;6618 6618 3693;4301;4302 2 TPEDGDYSYEIIEK ETIGKTTKTPEDGDYS YSYEIIEKTTRTPEEG K T P E K T 0 0 0 2 0 0 3 1 0 2 0 1 0 0 1 1 1 0 2 0 0 0 14 0 1657.7359 P46821 P46821 1932 1945 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.006E-14 124.6 By MS/MS By MS/MS 2 2 27976000 13815000 14161000 3503 1367 3765;3766 7945;7946;7947;7948 6619;6620;6621 6621 1811;4303;4304 3 TPEEGGYSYDISEK EIIEKTTRTPEEGGYS YSYDISEKTTSPPEVS R T P E K T 0 0 0 1 0 0 3 2 0 1 0 1 0 0 1 2 1 0 2 0 0 0 14 0 1573.6784 P46821 P46821 1949 1962 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 3.8963E-106 181.31 By MS/MS By MS/MS 3 3 19923000 10360000 9563300 3504 1367 3767;3768 7949;7950;7951;7952;7953;7954 6622;6623;6624;6625;6626 6622 1812;4305;4306 4 TPEELDDSDFETEDFDVR RKAVLMIRTPEELDDS ETEDFDVRSRTSVQTE R T P V R S 0 1 0 5 0 0 4 0 0 0 1 0 0 2 1 1 2 0 0 1 0 0 18 0 2157.8862 G3XAM7;P35221 G3XAM7 634 651 CTNNA1 Catenin alpha-1 yes no 2 2.4813E-132 182.17 By MS/MS By MS/MS 1 1 81273000 37943000 43330000 3505 805 3769 7955;7956 6627;6628 6627 1070 2 TPEGLPDAPR TNDFVTLRTPEGLPDA EGLPDAPRNLQLSLPR R T P P R N 1 1 0 1 0 0 1 1 0 0 1 0 0 0 3 0 1 0 0 0 0 0 10 0 1051.5298 E9PKB0;E9PS32;E9PP43;E9PPB3;Q92673 E9PKB0 261 270 SORL1 Sortilin-related receptor yes no 3 0.018915 42.348 By MS/MS 1 0 0 0 3506 652 3770 7957 6629 6629 1 TPEPVVPTAPEPHPTTSTDQPVTPK RTNRSSVKTPEPVVPT TDQPVTPKLTSRATRR K T P P K L 1 0 0 1 0 1 2 0 1 0 0 1 0 0 8 1 6 0 0 3 0 0 25 0 2622.3177 Q14676 Q14676 1608 1632 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.0033066 55.972 By MS/MS By MS/MS 1 1 6873700 3772900 3100800 3507 1523 3771 7958;7959 6630;6631 6630 2094;3756;3757;3758;3759 2 TPESQPDTPPGTPLVSQDEKR TLRWEETRTPESQPDT LVSQDEKRDAELPKKR R T P K R D 0 1 0 2 0 2 2 1 0 0 1 1 0 0 5 2 3 0 0 1 0 0 21 1 2278.1077 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60 A0A0D9SEV0 111 131 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase yes no 3 0.0020029 76.301 By MS/MS By MS/MS 1 1 3455000 1620600 1834400 3508 225 3772 7960;7961 6632;6633 6632 3294;3295 2 TPGAAANLELIFVGPQHAGNYR TKAVKTVRTPGAAANL PQHAGNYRCRYRSWVP R T P Y R C 4 1 2 0 0 1 1 3 1 1 2 0 0 1 2 0 1 0 1 1 0 0 22 0 2295.176 P04217 P04217 448 469 A1BG Alpha-1B-glycoprotein yes yes 3 0.00090845 75.55 By MS/MS By matching 1 1 977630 599030 378590 3509 1217 3773 7962;7963 6634 6634 1 TPGRQSPGPGHRSPDSGHVAK EHVQRVLRTPGRQSPG PDSGHVAKMPVALGGA R T P A K M 1 2 0 1 0 1 0 4 2 0 0 1 0 0 4 3 1 0 0 1 0 0 21 2 2124.0573 O15169 O15169 481 501 AXIN1 Axin-1 yes yes 4 0.0015412 58.635 By matching By MS/MS 1 1 6502400 2637100 3865300 3510 1106 3774 7964;7965 6635 6635 1475;1476 1 TPHTPGTPK PGTPSYPRTPHTPGTP PHTPGTPKSAILVPSE R T P P K S 0 0 0 0 0 0 0 1 1 0 0 1 0 0 3 0 3 0 0 0 0 0 9 0 934.48723 P11137 P11137 1625 1633 MAP2 Microtubule-associated protein 2 yes yes 2 0.014602 53.013 By MS/MS 1 324010 324010 0 3511 1256 3775 7966 6636 6636 3647;3648 0 TPLALAGSPTPK PSSPLLKKTPLALAGS LAGSPTPKNPEDKSPQ K T P P K N 2 0 0 0 0 0 0 1 0 0 2 1 0 0 3 1 2 0 0 0 0 0 12 0 1151.655 B9EGQ5;M0QXA7;O95785 B9EGQ5 170 181 WIZ Protein Wiz yes no 2 0.00098587 96.371 By MS/MS By MS/MS 1 1 4950800 2486900 2463800 3512 423 3776 7967;7968 6637;6638 6638 592;3357 2 TPLGASLDEQSSSTLK AIWLKDCRTPLGASLD EQSSSTLKGVLVRNGG R T P L K G 1 0 0 1 0 1 1 1 0 0 3 1 0 0 1 4 2 0 0 0 0 0 16 0 1632.8206 E9PHV5;P28290 E9PHV5 87 102 SSFA2 Sperm-specific antigen 2 yes no 2 0.0064195 57.788 By MS/MS By MS/MS 1 1 3552100 1561600 1990500 3513 636 3777 7969;7970 6639;6640 6640 867 2 TPLSPSPMK PAAAAIPRTPLSPSPM PLSPSPMKTPPAAAVS R T P M K T 0 0 0 0 0 0 0 0 0 0 1 1 1 0 3 2 1 0 0 0 0 0 9 0 956.5001 F8WAN1;Q69YQ0 F8WAN1 865 873 SPECC1L-ADORA2A;SPECC1L Cytospin-A yes no 2 0.015372 84.821 By MS/MS By matching 1 1 2676800 1356200 1320600 3514 761 3778 7971;7972 6641 6641 89 1017 1 TPPSTTVGSHSPPETPVLTR PKQDVVGKTPPSTTVG PETPVLTRSSAQTSAA K T P T R S 0 1 0 0 0 0 1 1 1 0 1 0 0 0 5 3 5 0 0 2 0 0 20 0 2060.0538 H7C4X9;A0A087WVZ6;Q9ULU4 H7C4X9 673 692 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.0034662 60.171 By MS/MS By matching 1 1 4829100 2470600 2358600 3515 57 3779 7973;7974 6642 6642 76 1 TPPVALNSSR TRNHSGSRTPPVALNS PVALNSSRMSCFSRPS R T P S R M 1 1 1 0 0 0 0 0 0 0 1 0 0 0 2 2 1 0 0 1 0 0 10 0 1040.5615 Q9UQ35 Q9UQ35 2104 2113 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.020665 69.261 By matching By MS/MS 1 1 2949500 1171300 1778200 3516 2134 3780 7975;7976 6643 6643 3965 1 TPQPSGAPTVQVTR ________________ APTVQVTRETERSFPR M T P T R E 1 1 0 0 0 2 0 1 0 0 0 0 0 0 3 1 3 0 0 2 0 0 14 0 1437.7576 Q9Y4Z2 Q9Y4Z2 2 15 NEUROG3 Neurogenin-3 yes yes 2 0.020488 44.294 By MS/MS 1 0 0 0 3517 2163 3781 7977 6644 6644 3982;3983 1 TPQPSSPMDQMGK GGGQPLARTPQPSSPM SPMDQMGKMRPQPYGG R T P G K M 0 0 0 1 0 2 0 1 0 0 0 1 2 0 3 2 1 0 0 0 0 0 13 0 1402.6221 O14497 O14497 377 389 ARID1A AT-rich interactive domain-containing protein 1A yes yes 2 0.01134 60.064 By matching By MS/MS 2 2 9209900 4142600 5067400 3518 1091 3782;3783 7978;7979;7980;7981 6645;6646;6647 6647 128 1440;1441 3 TPQSPAPCVLLR PETAPAARTPQSPAPC PAPCVLLRAQRSLAPE R T P L R A 1 1 0 0 1 1 0 0 0 0 2 0 0 0 3 1 1 0 0 1 0 0 12 0 1337.7126 Q9Y613 Q9Y613 495 506 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.0013275 90.731 By MS/MS By MS/MS 1 1 8385100 3873300 4511800 3519 2174 3784 7982;7983 6648;6649 6648 3159 2 TPQSPTLPPAK VPSEDFERTPQSPTLP SPTLPPAKVAAPNLSR R T P A K V 1 0 0 0 0 1 0 0 0 0 1 1 0 0 4 1 2 0 0 0 0 0 11 0 1135.6237 P78310 P78310 329 339 CXADR Coxsackievirus and adenovirus receptor yes yes 2 0.008784 63.966 By matching By MS/MS 1 1 4380400 2026300 2354100 3520 1440 3785 7984;7985 6650 6650 1918 1 TPSPKEEDEEPESPPEKK ASKASKEKTPSPKEED PESPPEKKTSTSPPPE K T P K K T 0 0 0 1 0 0 6 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 18 2 2051.9535 Q9H1E3 Q9H1E3 202 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 1.7401E-83 161.08 By MS/MS By MS/MS 1 1 235940000 109620000 126320000 3521 1992 3786 7986;7987 6651;6652;6653;6654;6655;6656 6656 2846 6 TPSPTLK LASMNVERTPSPTLKS RTPSPTLKSNTMLSLL R T P L K S 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 1 2 0 0 0 0 0 7 0 742.4225 E9PCK9 E9PCK9 474 480 MLIP yes yes 2 0.0090988 116.25 By MS/MS 1 10577000 0 10577000 3522 612 3787 7988 6657 6657 841 1 TPSSEEISPTKFPGLYR EHGSGLTRTPSSEEIS TKFPGLYRTGEPSPPH R T P Y R T 0 1 0 0 0 0 2 1 0 1 1 1 0 1 3 3 2 0 1 0 0 0 17 1 1907.9629 J3QLT3;E7ENF8;Q15311 J3QLT3 27 43 RALBP1 RalA-binding protein 1 yes no 3 0.0012097 71.354 By MS/MS 1 3225400 3225400 0 3523 566 3788 7989 6658 6658 748;749 1 TPSSPLQSCTPSLSPR PRSPHASRTPSSPLQS CTPSLSPRSHVPSPHQ R T P P R S 0 1 0 0 1 1 0 0 0 0 2 0 0 0 4 5 2 0 0 0 0 0 16 0 1713.8356 R4GNJ5;A0A0C4DGT6;Q96AP0 R4GNJ5 333 348 ACD Adrenocortical dysplasia protein homolog yes no 2 0.0053495 66.606 By matching By MS/MS 1 1 3779300 1758500 2020800 3524 220 3789 7990;7991 6659 6659 315;316 1 TPSSSPPITPPASETK SIRNWVTRTPSSSPPI TPPASETKIMSPRKAL R T P T K I 1 0 0 0 0 0 1 0 0 1 0 1 0 0 5 4 3 0 0 0 0 0 16 0 1595.8043 F5GZ90;Q9NZJ0 F5GZ90 466 481 DTL Denticleless protein homolog yes no 2 0.0063743 69.289 By MS/MS By matching 1 1 5063200 3008300 2054900 3525 704 3790 7992;7993 6660;6661 6661 941;3466 2 TPTPEPAEVETR PVVPPSVKTPTPEPAE EPAEVETRKVVLMQCN K T P T R K 1 1 0 0 0 0 3 0 0 0 0 0 0 0 3 0 3 0 0 1 0 0 12 0 1325.6463 F8W6G1;Q9UHY1 F8W6G1 439 450 NRBP1 Nuclear receptor-binding protein yes no 2 1.5896E-05 112.02 By matching By MS/MS 1 1 5680500 2861000 2819500 3526 751 3791 7994;7995 6662 6662 3481 1 TPTSPLK FIQPAAQKTPTSPLKM KTPTSPLKMKPGRPRI K T P L K M 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 1 2 0 0 0 0 0 7 0 742.4225 O60264 O60264 113 119 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes yes 2 0.014454 93.598 By MS/MS By MS/MS 1 1 19736000 9158300 10577000 3527 1133 3792 7996;7997 6663;6664;6665 6663 1508 3 TPTSPLSPSSQK SDKGRSQKTPTSPLSP PLSPSSQKSLQFDVAG K T P Q K S 0 0 0 0 0 1 0 0 0 0 1 1 0 0 3 4 2 0 0 0 0 0 12 0 1228.6299 Q5VT06 Q5VT06 1253 1264 CEP350 Centrosome-associated protein 350 yes yes 2 0.00041188 82.705 By MS/MS 1 0 0 0 3528 1643 3793 7998 6666 6666 2290;2291 1 TPTSSPASSPLVAK KPLHGVLKTPTSSPAS ASSPLVAKKPLTTTPR K T P A K K 2 0 0 0 0 0 0 0 0 0 1 1 0 0 3 4 2 0 0 1 0 0 14 0 1341.714 Q14684 Q14684 728 741 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 4.8532E-169 203.85 By MS/MS By MS/MS 3 4 93046000 46441000 46604000 3529 1526 3794;3795 7999;8000;8001;8002;8003;8004;8005 6667;6668;6669;6670;6671;6672 6667 2099;2100;2101 6 TPVQYSQQQNSPQK LYEPAKMKTPVQYSQQ QQQNSPQKHKNKDLYT K T P Q K H 0 0 1 0 0 5 0 0 0 0 0 1 0 0 2 2 1 0 1 1 0 0 14 0 1631.7903 P46013 P46013 347 360 MKI67 Antigen KI-67 yes yes 2 1.0102E-21 137.39 By MS/MS By MS/MS 1 1 7468500 3207500 4261000 3530 1361 3796 8006;8007 6673;6674 6673 1793 2 TPVSGSLKSPVPR ENVKGGEKTPVSGSLK SLKSPVPRSDIPEPER K T P P R S 0 1 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 1 1323.751 H0Y7U4;A0A0C4DG98;Q8NI27;H7C477 H0Y7U4 153 165 THOC2 THO complex subunit 2 yes no 2;3 0.0010337 80.746 By MS/MS By MS/MS 2 2 19181000 9163900 10018000 3531 208 3797 8008;8009;8010;8011 6675;6676;6677 6676 302;303 3 TPYEAYDPIGK APPSGLERTPYEAYDP EAYDPIGKYATATRFS R T P G K Y 1 0 0 1 0 0 1 1 0 1 0 1 0 0 2 0 1 0 2 0 0 0 11 0 1252.5976 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 533 543 KIRREL Kin of IRRE-like protein 1 yes no 2 0.0040136 64.73 By MS/MS By MS/MS 3 2 4286800 2620200 1666500 3532 375 3798;3799 8012;8013;8014;8015;8016 6678;6679;6680 6678 4089;4090 3 TQDPSSPGTTPPQAR VEGTPASRTQDPSSPG GTTPPQARQAPAPTVI R T Q A R Q 1 1 0 1 0 2 0 1 0 0 0 0 0 0 4 2 3 0 0 0 0 0 15 0 1538.7325 Q13112 Q13112 424 438 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 0 244 By MS/MS By MS/MS 2 3 33548000 17555000 15993000 3533 1490 3800;3801 8017;8018;8019;8020;8021 6681;6682;6683;6684;6685 6682 2036;2037;3738 5 TQFEDLVPSPTSEK NVDSEFARTQFEDLVP VPSPTSEKAFLAQIHA R T Q E K A 0 0 0 1 0 1 2 0 0 0 1 1 0 1 2 2 2 0 0 1 0 0 14 0 1576.7621 M0R0C4;M0QZ28;Q9Y4J8 M0R0C4 80 93 DTNA Dystrobrevin alpha yes no 2 6.1464E-07 106.82 By MS/MS By MS/MS 1 1 4461900 2344100 2117800 3534 1067 3802 8022;8023 6686;6687 6686 1404 2 TQKQVLDYVK SSFRFSGRTQKQVLDY KQVLDYVKEGGHKKVQ R T Q V K E 0 0 0 1 0 2 0 0 0 0 1 2 0 0 0 0 1 0 1 2 0 0 10 1 1220.6765 A0A1B0GV68;C9JME2;Q9Y4F1 A0A1B0GV68 343 352 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 3 0.016988 44.564 By MS/MS 1 296160 296160 0 3535 297 3803 8024 6688 6688 3314 0 TQLSPSIKR RSEAQRSKTQLSPSIK QLSPSIKRKREVSPPG K T Q K R K 0 1 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 9 1 1028.5978 Q8NFC6;H0Y9Y2 Q8NFC6 3016 3024 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 2 0.018671 82.489 By MS/MS By MS/MS 1 1 9624600 4802600 4822000 3536 1803 3804 8025;8026 6689;6690 6689 2537 2 TQMAEVLPSPR GGKAKGKKTQMAEVLP AEVLPSPRGQRVIPRI K T Q P R G 1 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 1 0 0 1 0 0 11 0 1227.6282 P11388 P11388 1205 1215 TOP2A DNA topoisomerase 2-alpha yes yes 2 1.6413E-15 143.25 By MS/MS By MS/MS 2 3 17465000 7671900 9792600 3537 1258 3805;3806 8027;8028;8029;8030;8031 6691;6692;6693;6694;6695;6696 6696 157 1661 6 TQNISDYR PSPYQGPRTQNISDYR TQNISDYRAPGPQAIQ R T Q Y R A 0 1 1 1 0 1 0 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 8 0 995.46722 Q9NQW1 Q9NQW1 858 865 SEC31B Protein transport protein Sec31B yes yes 1 0.01716 47.082 By MS/MS By matching 1 1 1296200 550530 745700 3538 2042 3807 8032;8033 6697 6697 297 2916;4442 0 TQNKEESYDFSK KPEPPKAKTQNKEESY EESYDFSKSYEYKSNP K T Q S K S 0 0 1 1 0 1 2 0 0 0 0 2 0 1 0 2 1 0 1 0 0 0 12 1 1474.6576 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1059 1070 TJP2 Tight junction protein ZO-2 yes no 2 0.001559 93.096 By MS/MS By MS/MS 1 1 1708800 888360 820480 3539 290 3808 8034;8035 6698;6699 6699 4057 2 TQNNLESDYLAR PSRVPGTKTQNNLESD LESDYLARDGPSSNSS K T Q A R D 1 1 2 1 0 1 1 0 0 0 2 0 0 0 0 1 1 0 1 0 0 0 12 0 1422.6739 A0A096LNZ0;A0A096LP25;Q6ZSR9 A0A096LNZ0 144 155 AAK1 Uncharacterized protein FLJ45252 yes no 2 0.00074012 81.338 By MS/MS By MS/MS 1 1 2085800 1118400 967380 3540 123 3809 8036;8037 6700;6701;6702 6702 4022 3 TQPDGTSVPGEPASPISQR SITSKLPRTQPDGTSV PASPISQRLPPKVESL R T Q Q R L 1 1 0 1 0 2 1 2 0 1 0 0 0 0 4 3 2 0 0 1 0 0 19 0 1922.9334 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1728 1746 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 0.00014734 93.093 By MS/MS By MS/MS 2 2 78852000 38878000 39974000 3541 79 3810 8038;8039;8040;8041 6703;6704;6705;6706;6707;6708;6709 6709 101;102 7 TQSLSALPK PLPPGKRRTQSLSALP QSLSALPKERDSSSEK R T Q P K E 1 0 0 0 0 1 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 9 0 943.53385 A0A0A0MQR4;I3L2J0;Q96RK0 A0A0A0MQR4 171 179 CIC Protein capicua homolog yes no 2 0.020728 61.48 By MS/MS By matching 1 1 4339100 1926400 2412700 3542 126 3811 8042;8043 6710 6710 171 1 TQSPGGCSAEAVLAR GWNSRSPRTQSPGGCS SAEAVLARKKHRRRPS R T Q A R K 3 1 0 0 1 1 1 2 0 0 1 0 0 0 1 2 1 0 0 1 0 0 15 0 1502.7147 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2 K7ESM2 74 88 HEXIM2 Protein HEXIM2 yes no 2 0.00011757 87.138 By MS/MS By MS/MS 1 1 3005900 1547600 1458300 3543 1035 3812 8044;8045 6711;6712 6711 1375 2 TQSSSCEDLPSTTQPK FKIVPSYRTQSSSCED LPSTTQPKGRQIYVRA R T Q P K G 0 0 0 1 1 2 1 0 0 0 1 1 0 0 2 4 3 0 0 0 0 0 16 0 1764.7836 Q5JS72 Q5JS72 188 203 CASK yes yes 2 0.011551 53.448 By MS/MS By matching 1 1 18725000 7959400 10766000 3544 1605 3813 8046;8047 6713 6713 2224 1 TQTPPLGQTPQLGLK PPSAQPPRTQTPPLGQ QTPQLGLKTNPPLIQE R T Q L K T 0 0 0 0 0 3 0 2 0 0 3 1 0 0 3 0 3 0 0 0 0 0 15 0 1577.8777 E9PKF8;H0Y3P2;D3DQV9;P78344 E9PKF8 11 25 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 2 0.011147 62.077 By matching By MS/MS 1 1 15727000 7715700 8011800 3545 516 3814 8048;8049 6714 6714 3387;3388 1 TQTPPVSPAPQPTEER LEEQARAKTQTPPVSP APQPTEERLPSSPVYE K T Q E R L 1 1 0 0 0 2 2 0 0 0 0 0 0 0 5 1 3 0 0 1 0 0 16 0 1733.8584 Q14247;H0YEV2;H0YCD9 Q14247 399 414 CTTN Src substrate cortactin yes no 2;3 0.011357 56.339 By MS/MS By matching 2 2 5953500 2863300 3090100 3546 1519 3815;3816 8050;8051;8052;8053 6715;6716 6715 2082;3749;3750 2 TQYNQVPSEDFER SNMEGYSKTQYNQVPS VPSEDFERTPQSPTLP K T Q E R T 0 1 1 1 0 2 2 0 0 0 0 0 0 1 1 1 1 0 1 1 0 0 13 0 1611.7165 P78310 P78310 316 328 CXADR Coxsackievirus and adenovirus receptor yes yes 2 0.020277 45.829 By MS/MS By MS/MS 1 1 4519500 2247100 2272500 3547 1440 3817 8054;8055 6717;6718 6717 4326 2 TRLSTASEETVQNR PPICLRRRTRLSTASE SEETVQNRVSLEKVLG R T R N R V 1 2 1 0 0 1 2 0 0 0 1 0 0 0 0 2 3 0 0 1 0 0 14 1 1590.7962 H7C3R4;O43379 H7C3R4 40 53 WDR62 WD repeat-containing protein 62 yes no 3 1.3552E-36 150.92 By MS/MS By matching 1 1 3789200 2221400 1567700 3548 965 3818 8056;8057 6719 6719 1296;3544;3545 1 TRSNPEGAEDR HSAEPRPRTRSNPEGA NPEGAEDRAVGAQASP R T R D R A 1 2 1 1 0 0 2 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 11 1 1230.5589 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;M0R2I2;J3KQS6;Q9NWV8 M0R3H9 27 37 BABAM1 BRISC and BRCA1-A complex member 1 yes no 2 0.0045296 87.719 By MS/MS By MS/MS 1 1 17253000 8764900 8488200 3549 1009 3819 8058;8059 6720;6721 6721 1344 2 TRSPSPDDILER SSPQSSTRTRSPSPDD SPDDILERVAADVKEY R T R E R V 0 2 0 2 0 0 1 0 0 1 1 0 0 0 2 2 1 0 0 0 0 0 12 1 1384.6947 Q13523;H0YDJ3 Q13523 576 587 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 2 0.010048 70.68 By MS/MS By matching 1 1 4152900 1973000 2179900 3550 1505 3820 8060;8061 6722 6722 2063;2064 1 TRSYDNLTTACDNTVPLASR PPLSRLPKTRSYDNLT NTVPLASRRCSDPSLN K T R S R R 2 2 2 2 1 0 0 0 0 0 2 0 0 0 1 2 4 0 1 1 0 0 20 1 2254.0648 G5E953;Q13615 G5E953 475 494 MTMR3 Myotubularin-related protein 3 yes no 3 0.0015164 76.015 By matching By MS/MS 1 1 8512400 3979400 4532900 3551 807 3821 8062;8063 6723 6723 1072 1 TRTFSATVR PSPLPTRRTRTFSATV RTFSATVRASQGPVYK R T R V R A 1 2 0 0 0 0 0 0 0 0 0 0 0 1 0 1 3 0 0 1 0 0 9 1 1037.5618 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 48 56 CARHSP1 Calcium-regulated heat stable protein 1 yes no 2 0.019419 87.713 By matching By MS/MS 1 1 23471000 11955000 11515000 3552 913 3822 8064;8065 6724 6724 3532 1 TRVEGSSKIQYR SSNITVKKTRVEGSSK GSSKIQYRKEQQQQQM K T R Y R K 0 2 0 0 0 1 1 1 0 1 0 1 0 0 0 2 1 0 1 1 0 0 12 2 1422.7579 B4DWJ3;Q96CJ1 B4DWJ3 112 123 EAF2 ELL-associated factor 2 yes no 2 0.010472 61.78 By MS/MS By matching 1 1 68793000 38899000 29894000 3553 384 3823 8066;8067 6725 6725 358 1 TSAAACAVTDLSDDSDFDEKAK PKPKSVSKTSAAACAV SDFDEKAKLKYYKEIE K T S A K L 5 0 0 5 1 0 1 0 0 0 1 2 0 1 0 3 2 0 0 1 0 0 22 1 2316.0064 Q9NQZ2 Q9NQZ2 354 375 UTP3 Something about silencing protein 10 yes yes 3 0.0053551 58.848 By matching By MS/MS 2 2 12879000 5387500 7491200 3554 2044 3824;3825 8068;8069;8070;8071 6726;6727 6727 2918;2919 2 TSAVSSPLLDQQR SASKKDRKTSAVSSPL SPLLDQQRNSKTNQSK K T S Q R N 1 1 0 1 0 2 0 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 13 0 1400.726 Q5T200;A0A087WX14 Q5T200 237 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 2.9826E-09 115.24 By MS/MS By MS/MS 1 1 11341000 5400100 5941100 3555 1624 3826 8072;8073 6728;6729 6728 2256 2 TSDIFGSPVTATSR HLNPPGGKTSDIFGSP SPVTATSRLAHPNKPK K T S S R L 1 1 0 1 0 0 0 1 0 1 0 0 0 1 1 3 3 0 0 1 0 0 14 0 1437.71 H3BMT0;H3BTV5;H3BU16;A6NGP5;H3BMV3;Q9H910 H3BMT0 75 88 HN1L Hematological and neurological expressed 1-like protein yes no 2 5.3709E-06 101.53 By MS/MS 1 8365100 0 8365100 3556 327 3827 8074 6730 6730 466 1 TSDQTWVK VEHGGFYRTSDQTWVK TSDQTWVKLERIQFVG R T S V K L 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 1 2 1 0 1 0 0 8 0 963.46616 Q14204 Q14204 2695 2702 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 1 0.016484 51.268 By MS/MS By matching 1 1 579730 499850 79882 3557 1517 3828 8075;8076 6731 6731 2077;3748 0 TSDVGGYYYEKIER ESYEKTTRTSDVGGYY YYYEKIERTTKSPSDS R T S E R T 0 1 0 1 0 0 2 2 0 1 0 1 0 0 0 1 1 0 3 1 0 0 14 1 1678.7839 P46821 P46821 1898 1911 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2;3 5.4519E-17 129.54 By MS/MS By MS/MS 3 3 18486000 9145500 9340400 3558 1367 3829;3830 8077;8078;8079;8080;8081;8082 6732;6733;6734;6735;6736 6734 4307;4308;4309 5 TSEIEPKNSPEDLGLSLTGDSCK SLTVECSKTSEIEPKN SLTGDSCKLMLSTSEY K T S C K L 0 0 1 2 1 0 3 2 0 1 3 2 0 0 2 4 2 0 0 0 0 0 23 1 2476.1639 Q12888;A6NNK5;C9JXV0 Q12888 492 514 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.0013291 67.396 By MS/MS By matching 1 1 11085000 5587200 5497900 3559 1481 3831 8083;8084 6737 6737 2010;2015;3736 1 TSITQQPSKHR KLRHDLKKTSITQQPS TQQPSKHRTDEELQPP K T S H R T 0 1 0 0 0 2 0 0 1 1 0 1 0 0 1 2 2 0 0 0 0 0 11 1 1281.6789 A0A087WUH9;Q9NYY3 A0A087WUH9 391 401 PLK2 Serine/threonine-protein kinase PLK;Serine/threonine-protein kinase PLK2 yes no 3 0.021837 42.718 By MS/MS By matching 1 1 3315900 1417900 1898000 3560 40 3832 8085;8086 6738 6738 47;48;3218 1 TSLDIEEYSDTEVQK ________________ YSDTEVQKNQVLTLEE R T S Q K N 0 0 0 2 0 1 3 0 0 1 1 1 0 0 0 2 2 0 1 1 0 0 15 0 1755.8051 P51580 P51580 6 20 TPMT Thiopurine S-methyltransferase yes yes 2 0.010716 62.69 By matching By MS/MS 1 1 5980500 2553500 3427000 3561 1393 3833 8087;8088 6739 6739 3709 1 TSLEASMEASPK AMVKASPKTSLEASME ASMEASPKAKARDAPK K T S P K A 2 0 0 0 0 0 2 0 0 0 1 1 1 0 1 3 1 0 0 0 0 0 12 0 1249.586 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 411 422 MAP7D3 MAP7 domain-containing protein 3 yes no 2 2.345E-08 115.24 By MS/MS By MS/MS 1 1 2826900 1283200 1543600 3562 149 3834 8089;8090 6740;6741 6740 206 2 TSLMSAESPTPR EEEVCDERTSLMSAES SAESPTPRSCQEGRQG R T S P R S 1 1 0 0 0 0 1 0 0 0 1 0 1 0 2 3 2 0 0 0 0 0 12 0 1275.6129 E5RHT1;B1AP22;P49810 E5RHT1 18 29 PSEN2 Presenilin;Presenilin-2;Presenilin-2 NTF subunit;Presenilin-2 CTF subunit yes no 2 1.8019E-05 107.53 By MS/MS By MS/MS 1 1 3078000 1492700 1585300 3563 361 3835 8091;8092 6742;6743 6742 527 2 TSLPLSPVK DYFPSPSKTSLPLSPV SLPLSPVKTAPLFSND K T S V K T 0 0 0 0 0 0 0 0 0 0 2 1 0 0 2 2 1 0 0 1 0 0 9 0 940.55933 Q86XL3 Q86XL3 263 271 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0071699 84.687 By MS/MS By MS/MS 1 1 4675700 1891800 2783900 3564 1740 3836 8093;8094 6744;6745 6744 2448 2 TSLSSDSNK LDFMLPRKTSLSSDSN SLSSDSNKTFCMIGHC K T S N K T 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 4 1 0 0 0 0 0 9 0 937.43525 Q99698 Q99698 1635 1643 LYST Lysosomal-trafficking regulator yes yes 2 0.0063921 71.296 By MS/MS 1 0 0 0 3565 1944 3837 8095 6746 6746 278 2751;2752;3906 1 TSMGDLQRQLYNR YSSMSAFKTSMGDLQR LQRQLYNRGEYNIFKY K T S N R G 0 2 1 1 0 2 0 1 0 0 2 0 1 0 0 1 1 0 1 0 0 0 13 1 1580.7729 Q8TC56 Q8TC56 23 35 FAM71B Protein FAM71B yes yes 2 0.017525 42.395 By MS/MS 1 0 0 0 3566 1817 3838 8096 6747 6747 2561;3862;4398 1 TSMGGTQQQFVEGVR AHQDTQRRTSMGGTQQ QQFVEGVRMEEIVEGC R T S V R M 0 1 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 15 0 1623.7675 B4DGU4;P35222 B4DGU4 544 558 CTNNB1 Catenin beta-1 yes no 2 0.00017213 79.036 By MS/MS By MS/MS 2 2 8591000 3903700 4687300 3567 374 3839;3840 8097;8098;8099;8100 6748;6749;6750 6749 51 537;3340;3341 3 TSPLKDNPSPEPQLDDIKR TKPPVGPKTSPLKDNP PQLDDIKRELRAEVDI K T S K R E 0 1 1 3 0 1 1 0 0 1 2 2 0 0 4 2 1 0 0 0 0 0 19 2 2149.1015 Q96JC9 Q96JC9 157 175 EAF1 ELL-associated factor 1 yes yes 3 0.012889 44.788 By MS/MS 1 2557700 2557700 0 3568 1901 3841 8101 6751 6751 2683;2684;3887 1 TSPPLLDR AYERVSGRTSPPLLDR TSPPLLDRARSRTPPS R T S D R A 0 1 0 1 0 0 0 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 8 0 897.49198 Q9UQ35 Q9UQ35 2397 2404 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.015865 79.489 By matching By MS/MS 1 1 29279000 13741000 15538000 3569 2134 3842 8102;8103 6752 6752 3097;3971 1 TSPTPGDFPK DMVKWDSRTSPTPGDF PTPGDFPKGLVARDNT R T S P K G 0 0 0 1 0 0 0 1 0 0 0 1 0 1 3 1 2 0 0 0 0 0 10 0 1045.508 C9JW56;Q9UPU7 C9JW56 42 51 TBC1D2B TBC1 domain family member 2B yes no 2 0.018915 57.885 By matching By MS/MS 1 1 928580 188760 739820 3570 484 3843 8104;8105 6753 6753 672 1 TSQVGAASAPAKESPR LQAKASGKTSQVGAAS APAKESPRKGAAPAPP K T S P R K 4 1 0 0 0 1 1 1 0 0 0 1 0 0 2 3 1 0 0 1 0 0 16 1 1555.7954 J3KQ96;E7ETY2;Q13428 J3KQ96 368 383 TCOF1 Treacle protein yes no 2;3 6.7709E-160 197.94 By MS/MS By MS/MS 2 2 153740000 81677000 72067000 3571 591 3844 8106;8107;8108;8109 6754;6755;6756;6757;6758;6759;6760 6758 792 7 TSQVGAASAPAKESPRK LQAKASGKTSQVGAAS PAKESPRKGAAPAPPG K T S R K G 4 1 0 0 0 1 1 1 0 0 0 2 0 0 2 3 1 0 0 1 0 0 17 2 1683.8904 J3KQ96;E7ETY2;Q13428 J3KQ96 368 384 TCOF1 Treacle protein yes no 3 5.8142E-05 94.339 By MS/MS By MS/MS 1 1 8213200 4475000 3738100 3572 591 3845 8110;8111 6761;6762 6761 792 2 TSSAELSTSAPDEPLLQK LTGVSTIRTSSAELST PDEPLLQKSPSESFIG R T S Q K S 2 0 0 1 0 1 2 0 0 0 3 1 0 0 2 4 2 0 0 0 0 0 18 0 1872.9317 Q15139 Q15139 217 234 PRKD1 Serine/threonine-protein kinase D1 yes yes 2 0.00036885 92.856 By MS/MS By MS/MS 1 1 7104900 3423500 3681500 3573 1545 3846 8112;8113 6763;6764 6764 2136 2 TSSFTEQLDEGTPNR TPTRMRSRTSSFTEQL LDEGTPNRENASTHAS R T S N R E 0 1 1 1 0 1 2 1 0 0 1 0 0 1 1 2 3 0 0 0 0 0 15 0 1680.7591 E7EVX2;Q86W71;Q13439;C9J0Y3;C9JHJ5 E7EVX2 39 53 GOLGA4 Golgin subfamily A member 4 yes no 2 0.00080072 77.64 By matching By MS/MS 1 1 9815800 3800000 6015800 3574 598 3847 8114;8115 6765 6765 3428 1 TSSFVDWKELKLVYK IILSRGHRTSSFVDWK KELKLVYKRCL_____ R T S Y K R 0 0 0 1 0 0 1 0 0 0 2 3 0 1 0 2 1 1 1 2 0 0 15 2 1841.9927 F8W8K9;G5E966;B8ZZZ1;Q96PC3 F8W8K9 46 60 AP1S3 AP-1 complex subunit sigma-3 yes no 4 0.01313 41.912 By matching By MS/MS 1 1 53256000 22738000 30518000 3575 421 3848 8116;8117 6766 6766 587;588 1 TSSGDPPSPLVK GIARTPMKTSSGDPPS DPPSPLVKQLSEVFET K T S V K Q 0 0 0 1 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 1 0 0 12 0 1183.6085 F5GX58;F8WDL1;Q99618 F5GX58 80 91 CDCA3 Cell division cycle-associated protein 3 yes no 2 0.00068675 98.368 By MS/MS By MS/MS 1 1 3490400 1792000 1698500 3576 701 3849 8118;8119 6767;6768;6769;6770;6771 6771 937 5 TSSLAPVVGTTTTTPSPSAIK SRLASKTKTSSLAPVV TPSPSAIKAAAKSAAL K T S I K A 2 0 0 0 0 0 0 1 0 1 1 1 0 0 3 4 6 0 0 2 0 0 21 0 2015.0787 Q92733 Q92733 226 246 PRCC Proline-rich protein PRCC yes yes 2 0.0016856 80.236 By MS/MS By MS/MS 1 1 11249000 6025700 5222800 3577 1860 3850 8120;8121 6772;6773 6772 2628 2 TSSLDGAAVAVLSR GPGLPAHRTSSLDGAA AAVAVLSRTAPTGPGS R T S S R T 3 1 0 1 0 0 0 1 0 0 2 0 0 0 0 3 1 0 0 2 0 0 14 0 1345.7201 D6R9V6;A6NJ38;A6NHM7;Q7Z5H3 D6R9V6 226 239 ARHGAP22 Rho GTPase-activating protein 22 yes no 2 0.021215 51.03 By matching By MS/MS 1 1 1216800 531920 684860 3578 328 3851 8122;8123 6774 6774 467 1 TSSLTQFPPSQSEER CPPVKRERTSSLTQFP PPSQSEERSSGFRLKP R T S E R S 0 1 0 0 0 2 2 0 0 0 1 0 0 1 2 4 2 0 0 0 0 0 15 0 1692.7955 B7Z7F3;Q9H6Z4 B7Z7F3 56 70 RANBP3 Ran-binding protein 3 yes no 2 0.0057067 68.044 By MS/MS By MS/MS 1 1 3643100 1981900 1661200 3579 408 3852 8124;8125 6775;6776 6775 568;569;3353 2 TSSPRSPPSSSEIFTPAHEENVR RVVYNGKRTSSPRSPP PAHEENVRFIYEAWQG R T S V R F 1 2 1 0 0 0 3 0 1 1 0 0 0 1 4 6 2 0 0 1 0 0 23 1 2511.199 I3L2L5;I3L317;I3L4Q0;C9JLW8;I3L3A7 I3L2L5 11 33 FAM195B Protein FAM195B yes no 3 0.017824 56.29 By MS/MS By matching 1 1 5641500 3411100 2230400 3580 471 3853 8126;8127 6777 6777 658;659;3373 1 TSSVSSISQVSPER QEGTLKRKTSSVSSIS ISQVSPERGMPPPSSP K T S E R G 0 1 0 0 0 1 1 0 0 1 0 0 0 0 1 6 1 0 0 2 0 0 14 0 1462.7264 P42356 P42356 255 268 PI4KA Phosphatidylinositol 4-kinase alpha yes yes 2 0.0050103 64.313 By MS/MS By matching 1 1 2443200 1319400 1123800 3581 1355 3854 8128;8129 6778 6778 1776 1 TSSVVTLEVAK RAAELMTRTSSVVTLE VVTLEVAKQGAIYHGL R T S A K Q 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 2 2 0 0 3 0 0 11 0 1132.634 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1040 1050 MLLT4 Afadin yes no 2 0.0018125 91.858 By MS/MS By MS/MS 1 1 14700000 5831300 8868700 3582 338 3855 8130;8131 6779;6780 6779 484 2 TSTDRHSLSLDDIR QTICRKPKTSTDRHSL SLSLDDIRLYQKDFLR K T S I R L 0 2 0 3 0 0 0 0 1 1 2 0 0 0 0 3 2 0 0 0 0 0 14 1 1614.7962 G3V4T7;Q96NE9 G3V4T7 459 472 FRMD6 FERM domain-containing protein 6 yes no 3 0.0047225 59.434 By MS/MS 1 983380 983380 0 3583 799 3856 8132 6781 6781 1059 1 TSTSQAVFRLQSGICHLFRE DNRVIDLRTSTSQAVF GICHLFRE________ R T S R E - 1 2 0 0 1 2 1 1 1 1 2 0 0 2 0 3 2 0 0 1 0 0 20 2 2336.1695 C9J7S3 C9J7S3 156 175 DARS yes yes 3 0.016487 52.365 By MS/MS By matching 1 1 1397200 727590 669560 3584 448 3857 8133;8134 6782 6782 0 TSVKKFQNQQNNK HSENQAYKTSVKKFQN FQNQQNNKVISKRNSE K T S N K V 0 0 3 0 0 3 0 0 0 0 0 3 0 1 0 1 1 0 0 1 0 0 13 2 1562.8165 Q5JSC4;A0A087WYL3;Q17R60 Q5JSC4 121 133 IMPG1 Interphotoreceptor matrix proteoglycan 1 yes no 2 0.016068 43.991 By MS/MS 1 0 0 0 3585 83 3858 8135 6783 6783 13;14 103;3235 1 TSVLEESGPSR NLDSGEHKTSVLEESG LEESGPSRLNNNYLMS K T S S R L 0 1 0 0 0 0 2 1 0 0 1 0 0 0 1 3 1 0 0 1 0 0 11 0 1160.5673 H0Y8J2;Q03188 H0Y8J2 585 595 CENPC Centromere protein C yes no 2 0.0017967 90.614 By MS/MS 1 485940 0 485940 3586 852 3859 8136 6784 6784 1148 1 TSVSQNVIPSSAQK PSVLLDAKTSVSQNVI VIPSSAQKRETYTFEN K T S Q K R 1 0 1 0 0 2 0 0 0 1 0 1 0 0 1 4 1 0 0 2 0 0 14 0 1444.7522 H0Y8J2;Q03188 H0Y8J2 74 87 CENPC Centromere protein C yes no 2 0.00036506 88.311 By matching By MS/MS 1 1 2518000 1204500 1313500 3587 852 3860 8137;8138 6785 6785 1149 1 TSYETADKVLQNK EAVDLCLKTSYETADK ADKVLQNKLKQLARQA K T S N K L 1 0 1 1 0 1 1 0 0 0 1 2 0 0 0 1 2 0 1 1 0 0 13 1 1495.7518 Q9Y6W3 Q9Y6W3 123 135 CAPN7 Calpain-7 yes yes 2 0.0090847 51.359 By MS/MS 1 30336000 0 30336000 3588 2178 3861 8139 6786 6786 466 3165;3987 1 TTAEVWKRMNIK SGVTKADRTTAEVWKR VWKRMNIKPKKAWTKQ R T T I K P 1 1 1 0 0 0 1 0 0 1 0 2 1 0 0 0 2 1 0 1 0 0 12 2 1475.7919 Q96E66 Q96E66 170 181 LRTOMT Leucine-rich repeat-containing protein 51 yes yes 3 0.01458 43.316 By MS/MS 1 0 0 0 3589 1886 3862 8140 6787 6787 262 3881;3882 1 TTDVLTIKTDR LVGERYCKTTDVLTIK VLTIKTDRCPLRRQNY K T T D R C 0 1 0 2 0 0 0 0 0 1 1 1 0 0 0 0 4 0 0 1 0 0 11 1 1261.6878 P82673 P82673 201 211 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 2 0.020967 47.574 By MS/MS 1 0 0 0 3590 1444 3863 8141 6788 6788 3720;3721;3722 1 TTIDLTEDENQYSIGNLKPDTEYEVSLISR IKDVPGDRTTIDLTED YEVSLISRRGDMSSNP R T T S R R 0 1 2 3 0 1 4 1 0 3 3 1 0 0 1 3 4 0 2 1 0 0 30 1 3442.6628 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 847 876 TNC Tenascin yes no 3 7.7238E-08 63.701 By matching By MS/MS 1 1 9020400 4444600 4575800 3591 723 3864 8142;8143 6789 6789 1 TTIFSPEGR MSRRYDSRTTIFSPEG TIFSPEGRLYQVEYAM R T T G R L 0 1 0 0 0 0 1 1 0 1 0 0 0 1 1 1 2 0 0 0 0 0 9 0 1006.5084 H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YL69;P25789 H0YLS6 9 17 PSMA4 Proteasome subunit alpha type;Proteasome subunit alpha type-4 yes no 2 0.020808 61.435 By MS/MS By matching 1 1 2835700 1301200 1534500 3592 894 3865 8144;8145 6790 6790 1200 1 TTKTPEDGDYSYEIIEK YSYETIGKTTKTPEDG YSYEIIEKTTRTPEEG K T T E K T 0 0 0 2 0 0 3 1 0 2 0 2 0 0 1 1 3 0 2 0 0 0 17 1 1987.9262 P46821 P46821 1929 1945 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.00045837 81.594 By MS/MS By MS/MS 2 2 10616000 4716100 5899400 3593 1367 3866;3867 8146;8147;8148;8149 6791;6792;6793 6791 1811;4303;4304 3 TTNGKADSLNVSR RRELPALRTTNGKADS ADSLNVSRNSVMQELS R T T S R N 1 1 2 1 0 0 0 1 0 0 1 1 0 0 0 2 2 0 0 1 0 0 13 1 1361.6899 Q8TCU5 Q8TCU5 1060 1072 GRIN3A Glutamate receptor ionotropic, NMDA 3A yes yes 2 0.014373 47.545 By matching By MS/MS 1 1 1183600 541860 641740 3594 1821 3868 8150;8151 6794 6794 255 2564;3863 1 TTPSYVAFTDTER IANDQGNRTTPSYVAF VAFTDTERLIGDAAKN R T T E R L 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 1 4 0 1 1 0 0 13 0 1486.694 P48741;P17066;Q53FA3;P34931;E9PN25;E9PPY6;E9PKE3;P11142;P54652;E9PI65;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PNE6;A0A0G2JIW1;P0DMV9;P0DMV8 E9PKE3 37 49 HSPA7;HSPA6;HSPA1L;HSPA8;HSPA2;HSPA1B;HSPA1A Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 6;Heat shock 70 kDa protein 1-like;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2 0.0063695 68.536 By MS/MS By MS/MS 1 1 4065000 2074100 1990900 3595 654;1280;242 3869 8152;8153 6795;6796 6795 2 TTSAGTGGMWR CGTRSAGRTTSAGTGG AGTGGMWRFYTEDSPG R T T W R F 1 1 0 0 0 0 0 3 0 0 0 0 1 0 0 1 3 1 0 0 0 0 11 0 1123.508 P60468 P60468 47 57 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.0038816 77.674 By MS/MS By MS/MS 1 1 5363300 2050800 3312500 3596 1421 3870 8154;8155 6797;6798 6798 1913 2 TTSFAESCKPVQQPSAFGSMK ________________ PSAFGSMKVSRDKDGS R T T M K V 2 0 0 0 1 2 1 1 0 0 0 2 1 2 2 4 2 0 0 1 0 0 21 1 2287.0613 P49841 P49841 7 27 GSK3B Glycogen synthase kinase-3 beta yes yes 3 0.0015723 80.102 By matching By MS/MS 1 1 10937000 3844800 7091800 3597 1385 3871 8156;8157 6799 6799 1866 1 TTSISPALAR IPPKVPQRTTSISPAL SISPALARKNSPGNGS R T T A R K 2 1 0 0 0 0 0 0 0 1 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1015.5662 Q9UKE5 Q9UKE5 676 685 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.0028421 85.963 By MS/MS By MS/MS 2 2 21326000 12141000 9185500 3598 2107 3872;3873 8158;8159;8160;8161 6800;6801;6802 6801 3018;3019 3 TTSRSPVLSR VPPRVPVRTTSRSPVL SRSPVLSRRDSPLQGS R T T S R R 0 2 0 0 0 0 0 0 0 0 1 0 0 0 1 3 2 0 0 1 0 0 10 1 1102.6095 H7C3Z6;H7C0P6;G5E948;A0A0D9SEY1;C9J840;E7EX83;A0A0D9SG62;E7ENQ1;G3XAA2;H7C360;E7EN19;O95819 H7C3Z6 239 248 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 3 0.005125 66.326 By MS/MS By MS/MS 1 1 1220100 664410 555700 3599 226 3874 8162;8163 6803;6804 6803 325;326 2 TTTAAAVASTGPSSRSPSTLLPK KSTQTVAKTTTAAAVA SPSTLLPKKPTAIKTE K T T P K K 4 1 0 0 0 0 0 1 0 0 2 1 0 0 3 5 5 0 0 1 0 0 23 1 2200.1699 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4;B5MEG9 E7EVA0 1955 1977 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.00050546 63.488 By MS/MS By MS/MS 1 1 6056800 3007300 3049500 3600 596 3875 8164;8165 6805;6806;6807;6808 6805 818;3427 4 TTTPGPSLSQGVSVDEK GHPSTGLKTTTPGPSL QGVSVDEKLMPSAPVN K T T E K L 0 0 0 1 0 1 1 2 0 0 1 1 0 0 2 3 3 0 0 2 0 0 17 0 1701.8421 A0A0C4DG07;O60934 A0A0C4DG07 253 269 NBN Nibrin yes no 2 0.002658 67.252 By MS/MS 1 0 0 0 3601 202 3876 8166 6809 6809 293 1 TTWGDGGENSPCNVVSK FESGKAYKTTWGDGGE SPCNVVSKQPGPVTNG K T T S K Q 0 0 2 1 1 0 1 3 0 0 0 1 0 0 1 2 2 1 0 2 0 0 17 0 1806.7843 H3BM38;H3BV99;H3BP15;H3BQY9;O00161 H3BM38 101 117 SNAP23 Synaptosomal-associated protein;Synaptosomal-associated protein 23 yes no 2 0.0020518 71.888 By matching By MS/MS 1 1 8735600 3996800 4738800 3602 903 3877 8167;8168 6810 6810 1211 1 TVACGGTRDQLFMQEK APMSSAWKTVACGGTR DQLFMQEKARQLLGRL K T V E K A 1 1 0 1 1 2 1 2 0 0 1 1 1 1 0 0 2 0 0 1 0 0 16 1 1839.8608 P10244 P10244 665 680 MYBL2 Myb-related protein B yes yes 2 0.0094785 49.482 By matching By MS/MS 1 1 3351300 1142900 2208400 3603 1248 3878 8169;8170 6811 6811 404;405 3645 1 TVACTNSQGK CGKGVWKRTVACTNSQ ACTNSQGKCDASTRPR R T V G K C 1 0 1 0 1 1 0 1 0 0 0 1 0 0 0 1 2 0 0 1 0 0 10 0 1064.4921 Q8TE56 Q8TE56 945 954 ADAMTS17 A disintegrin and metalloproteinase with thrombospondin motifs 17 yes yes 2 0.020349 60.019 By matching By MS/MS 1 1 4016300 1957400 2058900 3604 1823 3879 8171;8172 6812 6812 1 TVANLLSGKSPR MPHPATGKTVANLLSG LLSGKSPRKSAEPSAN K T V P R K 1 1 1 0 0 0 0 1 0 0 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1241.7092 J3KQ96;E7ETY2;Q13428 J3KQ96 147 158 TCOF1 Treacle protein yes no 2;3 0.0012098 97.45 By MS/MS By MS/MS 2 2 108270000 56644000 51630000 3605 591 3880 8173;8174;8175;8176 6813;6814;6815;6816;6817 6817 801 5 TVDLDPGTLYVHSV PSRKSRAKTVDLDPGT GTLYVHSV________ K T V S V - 0 0 0 2 0 0 0 1 1 0 2 0 0 0 1 1 2 0 1 3 0 0 14 0 1514.7617 Q8WY07 Q8WY07 606 619 SLC7A3 Cationic amino acid transporter 3 yes yes 2 0.0041553 72.958 By MS/MS By matching 1 1 16389000 9027100 7362300 3606 1842 3881 8177;8178 6818 6818 3870;4402 1 TVDLGISDLEDDC TTGKRTIKTVDLGISD ISDLEDDC________ K T V D C - 0 0 0 4 1 0 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 13 0 1450.6134 F5H5U2;Q8NHQ9 F5H5U2 557 569 DDX55 ATP-dependent RNA helicase DDX55 yes no 2 2.6936E-95 179.94 By MS/MS By MS/MS 1 1 13908000 7661200 6247100 3607 718 3882 8179;8180 6819;6820 6820 952 2 TVEDEDQDSEEEKDNDSYIK VNDKNLKKTVEDEDQD KDNDSYIKERSDIPSG K T V I K E 0 0 1 5 0 1 5 0 0 1 0 2 0 0 0 2 1 0 1 1 0 0 20 1 2386.9772 Q9Y5T5 Q9Y5T5 407 426 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 3 0.013211 46.362 By MS/MS By matching 1 1 8574700 3943400 4631300 3608 2172 3883 8181;8182 6821 6821 3156 1 TVEDEDQDSEEEKDNDSYIKER VNDKNLKKTVEDEDQD NDSYIKERSDIPSGTS K T V E R S 0 1 1 5 0 1 6 0 0 1 0 2 0 0 0 2 1 0 1 1 0 0 22 2 2672.1209 Q9Y5T5 Q9Y5T5 407 428 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes yes 3;4 0.0023615 62.468 By MS/MS By MS/MS 2 2 26607000 13631000 12976000 3609 2172 3884 8183;8184;8185;8186 6822;6823 6822 3156 2 TVFPGAVPVLPASPPPK IPPSKRKKTVFPGAVP LPASPPPKDSLRSTPS K T V P K D 2 0 0 0 0 0 0 1 0 0 1 1 0 1 6 1 1 0 0 3 0 0 17 0 1672.9552 M0R2S2;M0R165;Q9UBC2 M0R2S2 63 79 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 2 0.013477 51.265 By matching By MS/MS 1 1 810370 283810 526560 3610 1074 3885 8187;8188 6824 6824 1417 1 TVFPGAVPVLPASPPPKDSLR IPPSKRKKTVFPGAVP PPPKDSLRSTPSHGSV K T V L R S 2 1 0 1 0 0 0 1 0 0 2 1 0 1 6 2 1 0 0 3 0 0 21 1 2144.1994 M0R2S2;M0R165;Q9UBC2 M0R2S2 63 83 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 3 0.001476 66.3 By matching By MS/MS 1 1 2248800 904210 1344600 3611 1074 3886 8189;8190 6825 6825 1417 1 TVHRSPLLLGAQR VPTASDSRTVHRSPLL PLLLGAQRRAVANGGT R T V Q R R 1 2 0 0 0 1 0 1 1 0 3 0 0 0 1 1 1 0 0 1 0 0 13 1 1446.8419 Q96DR7 Q96DR7 76 88 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 3 0.021714 46.88 By MS/MS 1 783960 783960 0 3612 1884 3887 8191 6826 6826 2657 1 TVIIEQSWGSPK VTMGPKGRTVIIEQSW EQSWGSPKVTKDGVTV R T V P K V 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 2 1 1 0 1 0 0 12 0 1343.7085 P10809;C9JL25;E7EXB4;E7ESH4;C9JL19;C9JCQ4 P10809 61 72 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2 4.9218E-09 123.28 By MS/MS By MS/MS 2 2 11815000 6138600 5676200 3613 1253 3888;3889 8192;8193;8194;8195 6827;6828;6829;6830 6830 1651;1652 4 TVIRLPSGSGAASPTGSAVDIR DVETQSGKTVIRLPSG TGSAVDIRAGAISASG K T V I R A 3 2 0 1 0 0 0 3 0 2 1 0 0 0 2 4 2 0 0 2 0 0 22 1 2111.1335 Q09666 Q09666 204 225 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 3 0.00054768 70.704 By MS/MS By MS/MS 1 1 2014000 855820 1158200 3614 1474 3890 8196;8197 6831;6832 6832 1995;1996 2 TVKQEQINTEPLEDTVLSPTK ETFEPEDKTVKQEQIN DTVLSPTKKRKRQKGT K T V T K K 0 0 1 1 0 2 3 0 0 1 2 2 0 0 2 1 4 0 0 2 0 0 21 1 2369.2326 O15446 O15446 268 288 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 3 2.4924E-10 102.37 By MS/MS By MS/MS 1 1 6273500 3271000 3002500 3615 1112 3891 8198;8199 6833;6834 6833 1481;3602;3603 2 TVLIMELINNVAK FGGAGVGKTVLIMELI ELINNVAKAHGGYSVF K T V A K A 1 0 2 0 0 0 1 0 0 2 2 1 1 0 0 0 1 0 0 2 0 0 13 0 1456.8323 P06576;F8W0P7;F8W079;H0YH81;H0YI37 P06576 213 225 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 0.0026239 88.681 By MS/MS 1 1795700 1795700 0 3616 1226 3892 8200 6835 6835 148 1 TVLMLQKENLPGR KDDEGNYKTVLMLQKE QKENLPGRRAQRDRRA K T V G R R 0 1 1 0 0 1 1 1 0 0 3 1 1 0 1 0 1 0 0 1 0 0 13 1 1497.8337 Q9H7R5 Q9H7R5 46 58 ZNF665 Zinc finger protein 665 yes yes 3 0.0066655 48.659 By MS/MS By matching 1 1 1758600 760240 998320 3617 2018 3893 8201;8202 6836 6836 295;449 291 1 TVLSGSIMQGTPR PHSDLKERTVLSGSIM SIMQGTPRATTESFED R T V P R A 0 1 0 0 0 1 0 2 0 1 1 0 1 0 1 2 2 0 0 1 0 0 13 0 1345.7024 A0A088AWL3;O75376 A0A088AWL3 1197 1209 NCOR1 Nuclear receptor corepressor 1 yes no 2 0.0056774 50.222 By MS/MS By matching 1 1 2615000 1235900 1379000 3618 119 3894 8203;8204 6837 6837 340 19 161;162 1 TVPPAVTGITFLSGGQSEEEASINLNAINK ATVTALRRTVPPAVTG INLNAINKCPLLKPWA R T V N K C 3 0 3 0 0 1 3 3 0 3 2 1 0 1 2 3 3 0 0 2 0 0 30 0 3056.5666 H3BQN4;J3KPS3;P04075;H3BR68 H3BQN4 260 289 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 3 0.0011957 51.844 By MS/MS By matching 1 1 7644500 5641700 2002800 3619 921 3895 8205;8206 6838 6838 1 TVPSTPTLVVPHR HFFDDEDRTVPSTPTL PTLVVPHRTDGFAEAI R T V H R T 0 1 0 0 0 0 0 0 1 0 1 0 0 0 3 1 3 0 0 3 0 0 13 0 1402.7932 P12270 P12270 2133 2145 TPR Nucleoprotein TPR yes yes 3 0.0087149 61.48 By MS/MS 1 801870 0 801870 3620 1264 3896 8207 6839 6839 3651 1 TVPSTTTSSNYLAK GSHPLVSRTVPSTTTS TSSNYLAKAMVSQIST R T V A K A 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 3 4 0 1 1 0 0 14 0 1468.7409 Q6ZU65 Q6ZU65 1003 1016 UBN2 Ubinuclein-2 yes yes 2 0.02029 54.898 By MS/MS By matching 1 1 24144000 12102000 12042000 3621 1698 3897 8208;8209 6840 6840 3824;3825 1 TVQDPMTGR MDDPDYWRTVQDPMTG VQDPMTGRDLRLTDEQ R T V G R D 0 1 0 1 0 1 0 1 0 0 0 0 1 0 1 0 2 0 0 1 0 0 9 0 1003.4757 A0A075B729;Q14137 A0A075B729 114 122 BOP1 Ribosome biogenesis protein BOP1 yes no 2 0.011272 59.908 By MS/MS 1 0 0 0 3622 11 3898 8210 6841 6841 332 3206 1 TVQNNKHYTCTESQSCKIDK SCKGFFKRTVQNNKHY SQSCKIDKTQRKRCPF R T V D K T 0 0 2 1 2 2 1 0 1 1 0 3 0 0 0 2 3 0 1 1 0 0 20 2 2440.1111 Q5T6F6;F1DAM0;Q13285 Q5T6F6 40 59 NR5A1 Steroidogenic factor 1 yes no 3 0.0030326 49.395 By MS/MS By matching 1 1 3229000 1423400 1805600 3623 683 3899 8211;8212 6842 6842 103;379;380 3458;4158 1 TVSASSTGDLPK SPSHDRSRTVSASSTG SSTGDLPKAKTRAADL R T V P K A 1 0 0 1 0 0 0 1 0 0 1 1 0 0 1 3 2 0 0 1 0 0 12 0 1161.5877 H7C5L6;P78362 H7C5L6 99 110 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 2 0.0013747 99.011 By MS/MS By MS/MS 2 2 12522000 5680200 6841800 3624 974 3900;3901 8213;8214;8215;8216 6843;6844;6845;6846;6847 6845 1306;3550 4 TVSDNSLSNSR DYTQPMKRTVSDNSLS DNSLSNSRGEGKPDLK R T V S R G 0 1 2 1 0 0 0 0 0 0 1 0 0 0 0 4 1 0 0 1 0 0 11 0 1178.5527 B7ZL14;H0Y7W6;Q96RU3 B7ZL14 294 304 FNBP1 Formin-binding protein 1 yes no 2 0.0017819 89.44 By MS/MS By MS/MS 2 2 6276300 2995500 3280800 3625 416 3902 8217;8218;8219;8220 6848;6849;6850;6851 6851 582 4 TVSLPLSSPNIK NSLSTSYKTVSLPLSS PLSSPNIKLNLTSPKR K T V I K L 0 0 1 0 0 0 0 0 0 1 2 1 0 0 2 3 1 0 0 1 0 0 12 0 1254.7184 A0A0A0MQZ8;H0Y7Y3;H0Y785;H0Y472;H0Y4P6;Q8IWZ3 A0A0A0MQZ8 46 57 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes no 2 0.0020817 77.912 By matching By MS/MS 1 1 1315900 580740 735140 3626 129 3903 8221;8222 6852 6852 176;177 1 TVSPSTIR QEQKGQPRTVSPSTIR TVSPSTIRDGPSSAPA R T V I R D 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 2 2 0 0 1 0 0 8 0 859.47633 Q96JH7 Q96JH7 745 752 VCPIP1 Deubiquitinating protein VCIP135 yes yes 2 0.0083121 87.258 By MS/MS By MS/MS 1 1 1595600 821780 773840 3627 1902 3904 8223;8224 6853;6854 6854 2687 2 TVSSPPTSPRPGSAATVSASTSNIIPPR SSELDASKTVSSPPTS TSNIIPPRHQKPAGAP K T V P R H 3 2 1 0 0 0 0 1 0 2 0 0 0 0 6 7 4 0 0 2 0 0 28 1 2734.425 O76094 O76094 618 645 SRP72 Signal recognition particle subunit SRP72 yes yes 3 0.0069896 53.957 By MS/MS By MS/MS 1 1 20267000 9585400 10681000 3628 1173 3905 8225;8226 6855;6856;6857 6857 1565;1566;1567;3632;3633 3 TVTAMDVVYALK YTEHAKRKTVTAMDVV MDVVYALKRQGRTLYG K T V L K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 1 3 0 0 12 0 1309.6952 P62805 P62805 81 92 HIST1H4A Histone H4 yes yes 2 0.020535 44.203 By MS/MS 1 424170 424170 0 3629 1432 3906 8227 6858 6858 192 0 TVTIWEIINSEYFTAEQR PFGKFQGKTVTIWEII EYFTAEQRRDLLRQFR K T V Q R R 1 1 1 0 0 1 3 0 0 3 0 0 0 1 0 1 3 1 1 1 0 0 18 0 2199.0848 Q15149 Q15149 3058 3075 PLEC Plectin yes yes 2 3.5124E-33 129.37 By MS/MS By matching 1 1 10575000 5451300 5123300 3630 1546 3907 8228;8229 6859 6859 1 TVTPASSAKTSPAK CEVSVTPKTVTPASSA SAKTSPAKQQAPPVRN K T V A K Q 3 0 0 0 0 0 0 0 0 0 0 2 0 0 2 3 3 0 0 1 0 0 14 1 1344.7249 A0A1C7CYX9;Q16555 A0A1C7CYX9 617 630 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 0.021688 56.768 By MS/MS By matching 1 1 1641600 1241000 400670 3631 306 3908 8230;8231 6860 6860 438;3317 1 TYASGYAHYEEQEN FTNLNLGRTYASGYAH AHYEEQEN________ R T Y E N - 2 0 1 0 0 1 3 1 1 0 0 0 0 0 0 1 1 0 3 0 0 0 14 0 1660.6641 Q9Y3S2 Q9Y3S2 307 320 ZNF330 Zinc finger protein 330 yes yes 2 0.0071705 60.518 By matching By MS/MS 1 1 10527000 4822200 5705200 3632 2155 3909 8232;8233 6861 6861 3132 1 TYSDEANQMR PKLFTHKRTYSDEANQ SDEANQMRVAPPRALL R T Y M R V 1 1 1 1 0 1 1 0 0 0 0 0 1 0 0 1 1 0 1 0 0 0 10 0 1213.5034 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 305 314 RAB11FIP5 Rab11 family-interacting protein 5 yes no 2 0.0022067 95.483 By MS/MS By MS/MS 1 1 5911900 2954100 2957900 3633 286 3910 8234;8235 6862;6863 6862 405 2 TYSLTTPAR LDRGLRKRTYSLTTPA YSLTTPARQRPVPQPS R T Y A R Q 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 3 0 1 0 0 0 9 0 1008.524 Q9Y4H2 Q9Y4H2 575 583 IRS2 Insulin receptor substrate 2 yes yes 2 0.011533 70.942 By MS/MS By MS/MS 1 1 1727700 912690 814990 3634 2160 3911 8236;8237 6864;6865 6864 3140 2 TYSYLTPDLWK ATFDAISKTYSYLTPD YLTPDLWKETVFTKSP K T Y W K E 0 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 2 1 2 0 0 0 11 0 1385.6867 H0YEN5;P15880;E9PQD7 H0YEN5 149 159 RPS2 40S ribosomal protein S2 yes no 2 0.0014045 84.718 By MS/MS By MS/MS 1 1 3108900 1227300 1881600 3635 881 3912 8238;8239 6866;6867 6866 3525;4187 2 TYVDPFTYEDPNQAVR KHLNQGVRTYVDPFTY EDPNQAVREFAKEIDA R T Y V R E 1 1 1 2 0 1 1 0 0 0 0 0 0 1 2 0 2 0 2 2 0 0 16 0 1913.8796 E9PG71;P54764 E9PG71 595 610 EPHA4 Receptor protein-tyrosine kinase;Ephrin type-A receptor 4 yes no 2 0.0033312 59.975 By matching By MS/MS 1 1 7171200 3195500 3975700 3636 631 3913 8240;8241 6868 6868 3435;4153 1 TYVDPHTYEDPTQAVHEFAK HLKLPGLRTYVDPHTY QAVHEFAKELDATNIS R T Y A K E 2 0 0 2 0 1 2 0 2 0 0 1 0 1 2 0 3 0 2 2 0 0 20 0 2347.0757 C9JXA2;P29320 C9JXA2 595 614 EPHA3 Receptor protein-tyrosine kinase;Ephrin type-A receptor 3 yes no 3 0.015055 41.988 By MS/MS By matching 1 1 3942300 1542900 2399500 3637 487 3914 8242;8243 6869 6869 3375;4115 1 TYWIIIELK ITCSERVRTYWIIIEL YWIIIELKHKAREKPY R T Y L K H 0 0 0 0 0 0 1 0 0 3 1 1 0 0 0 0 1 1 1 0 0 0 9 0 1177.6747 B5MCA4;P16422 B5MCA4 169 177 EPCAM Epithelial cell adhesion molecule yes no 2 0.021176 65.465 By MS/MS 1 3311500 0 3311500 3638 392 3915 8244 6870 6870 1 TYYPEVLWMHK PCPYCSHKTYYPEVLW PEVLWMHKRIWHRVSC K T Y H K R 0 0 0 0 0 0 1 0 1 0 1 1 1 0 1 0 1 1 2 1 0 0 11 0 1465.7064 Q92618;A0A087WUJ4 Q92618 769 779 ZNF516 Zinc finger protein 516 yes no 2 0.014211 49.423 By MS/MS 1 259570 0 259570 3639 1852 3916 8245 6871 6871 264 4406 1 VAAAAGSGPSPPGSPGHDRER QVPGGAVRVAAAAGSG SPGHDRERQPLLDRAR R V A E R Q 4 2 0 1 0 0 1 4 1 0 0 0 0 0 4 3 0 0 0 1 0 0 21 1 1971.9511 Q9BTU6 Q9BTU6 38 58 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes yes 3 0.0028968 66.893 By matching By MS/MS 1 1 9194400 4395000 4799400 3640 1961 3917 8246;8247 6872 6872 2779;2780 1 VAAETQSPSLFGSTK NSESESNKVAAETQSP PSLFGSTKLQQESTFL K V A T K L 2 0 0 0 0 1 1 1 0 0 1 1 0 1 1 3 2 0 0 1 0 0 15 0 1521.7675 Q9UKX7 Q9UKX7 215 229 NUP50 Nuclear pore complex protein Nup50 yes yes 2 2.6367E-29 142.19 By MS/MS By MS/MS 1 1 32673000 11712000 20961000 3641 2114 3918 8248;8249 6873;6874;6875 6874 3026;3027 3 VAASGAQDPEKSPDRLK REKDLELRVAASGAQD EKSPDRLKQFSVAPRH R V A L K Q 3 1 0 2 0 1 1 1 0 0 1 2 0 0 2 2 0 0 0 1 0 0 17 2 1767.9115 Q1MSJ5 Q1MSJ5 448 464 CSPP1 Centrosome and spindle pole-associated protein 1 yes yes 3 0.0042534 64.26 By MS/MS By matching 1 1 4217600 2668800 1548800 3642 1578 3919 8250;8251 6876 6876 2182 1 VAASPKSPTAALNESLVECPK GETENREKVAASPKSP ESLVECPKCNIQYPAT K V A P K C 4 0 1 0 1 0 2 0 0 0 2 2 0 0 3 3 1 0 0 2 0 0 21 1 2168.1147 Q53EZ4 Q53EZ4 422 442 CEP55 Centrosomal protein of 55 kDa yes yes 3 0.0017017 65.374 By MS/MS By MS/MS 1 1 5977300 3002200 2975100 3643 1595 3920 8252;8253 6877;6878;6879 6878 2214;3785 3 VADAKGDSESEEDEDLEVPVPSR PPEPGPDRVADAKGDS LEVPVPSRFNRRVSVC R V A S R F 2 1 0 4 0 0 5 1 0 0 1 1 0 0 2 3 0 0 0 3 0 0 23 1 2472.114 P13861 P13861 71 93 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 3 0.00066789 66.137 By MS/MS 1 19544000 0 19544000 3644 1272 3921 8254 6880 6880 1675;1676 1 VADLTEQYNEQYGAVR CPIDRSGRVADLTEQY NEQYGAVRTPYTMSYG R V A V R T 2 1 1 1 0 2 2 1 0 0 1 0 0 0 0 0 1 0 2 2 0 0 16 0 1854.8748 Q9BWF3 Q9BWF3 183 198 RBM4 RNA-binding protein 4 yes yes 2 4.5627E-21 121.02 By MS/MS By MS/MS 1 1 7332700 3304000 4028700 3645 1968 3922 8255;8256 6881;6882 6882 4429 2 VADNSFDAK EEIEVDSRVADNSFDA ADNSFDAKRGAAGDWG R V A A K R 2 0 1 2 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 9 0 965.44543 A0A0A0MRM9;Q14978 A0A0A0MRM9 648 656 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0042908 87.568 By matching By MS/MS 1 1 1972400 874840 1097600 3646 146 3923 8257;8258 6883 6883 197 1 VADNSFDAKR EEIEVDSRVADNSFDA DNSFDAKRGAAGDWGE R V A K R G 2 1 1 2 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 10 1 1121.5465 A0A0A0MRM9;Q14978 A0A0A0MRM9 648 657 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.018592 65.842 By matching By MS/MS 1 1 1806600 862650 943950 3647 146 3924 8259;8260 6884 6884 197 1 VADPDHDHTGFLTEYVATR ICDFGLARVADPDHDH LTEYVATRWYRAPEIM R V A T R W 2 1 0 3 0 0 1 1 2 0 1 0 0 1 1 0 3 0 1 2 0 0 19 0 2142.997 P28482 P28482 173 191 MAPK1 Mitogen-activated protein kinase 1 yes yes 3;4 4.4386E-30 120.63 By MS/MS By MS/MS 3 3 287170000 110790000 176370000 3648 1320 3925;3926 8261;8262;8263;8264;8265;8266 6885;6886;6887;6888;6889 6888 3671;3672;4280 5 VADYGMWER FYIEAAYKVADYGMWE ADYGMWERGDKTNQGI K V A E R G 1 1 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 1 1 1 0 0 9 0 1125.4913 P46019 P46019 178 186 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform yes yes 3 0.00013087 40.352 By MS/MS 1 0 0 0 3649 1362 3927 8267 6890 6890 180 4295 1 VAELALSLSSTSDDEPPSSVSHGAK PIKKQKKRVAELALSL SSVSHGAKASTTSLSG R V A A K A 3 0 0 2 0 0 2 1 1 0 3 1 0 0 2 7 1 0 0 2 0 0 25 0 2483.2027 Q5T7F5;Q8N1G2 Q5T7F5 20 44 CMTR1 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 yes no 3 0.0099114 44.258 By MS/MS By matching 1 1 3451400 1883800 1567600 3650 1630 3928 8268;8269 6891 6891 2270;2271;2272;2273;3796 1 VAFISLSPVR ________________ FISLSPVRRREAEYPG R V A V R R 1 1 0 0 0 0 0 0 0 1 1 0 0 1 1 2 0 0 0 2 0 0 10 0 1087.639 Q6ZU65 Q6ZU65 7 16 UBN2 Ubinuclein-2 yes yes 2 0.0056221 79.492 By matching By MS/MS 1 1 1865700 822980 1042700 3651 1698 3929 8270;8271 6892 6892 2371 1 VAGGAAPSKPASAK AVKKKPQKVAGGAAPS PSKPASAKKGKAESSN K V A A K K 5 0 0 0 0 0 0 2 0 0 0 2 0 0 2 2 0 0 0 1 0 0 14 1 1210.667 A0A0A0MRM9;Q14978 A0A0A0MRM9 506 519 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0068635 65.528 By matching By MS/MS 1 1 3251100 1593300 1657800 3652 146 3930 8272;8273 6893 6893 198 0 VAHEPVAPPEDKESESEAKVDGETASDSESR ________________ TASDSESRAESAPLPV R V A S R A 4 1 0 3 0 0 7 1 1 0 0 2 0 0 3 5 1 0 0 3 0 0 31 2 3281.4808 O95674 O95674 8 38 CDS2 Phosphatidate cytidylyltransferase 2 yes yes 4 7.9969E-10 72.881 By MS/MS By matching 1 1 10597000 5345400 5251500 3653 1196 3931 8274;8275 6894 6894 1598;3635 1 VAKDYPFYLTVK ________________ YPFYLTVKRANCSLEL M V A V K R 1 0 0 1 0 0 0 0 0 0 1 2 0 1 1 0 1 0 2 2 0 0 12 1 1442.781 C9J586;Q9NR81 C9J586 2 13 ARHGEF3 Rho guanine nucleotide exchange factor 3 yes no 2 0.020618 46.457 By MS/MS By matching 1 1 2801700 1065000 1736700 3654 444 3932 8276;8277 6895 6895 3364;4104 1 VAKLVASSLQTPVNPITGAR ________________ VNPITGARVAQYERED R V A A R V 3 1 1 0 0 1 0 1 0 1 2 1 0 0 2 2 2 0 0 3 0 0 20 1 2021.1633 F8W731;F8WCZ8;H7C4C9;Q3B820 F8W731 7 26 FAM161A Protein FAM161A yes no 2 0.0011463 67.995 By MS/MS By matching 1 1 33455000 20705000 12750000 3655 755 3933 8278;8279 6896 6896 111 1009;3482 1 VALSDDETKETENMR KEKKRGKRVALSDDET TKETENMRKKRRRIKL R V A M R K 1 1 1 2 0 0 3 0 0 0 1 1 1 0 0 1 2 0 0 1 0 0 15 1 1736.7887 Q15054;H0YD46 Q15054 304 318 POLD3 DNA polymerase delta subunit 3 yes no 3 4.0668E-06 99.161 By MS/MS By MS/MS 1 1 25663000 11951000 13713000 3656 1540 3934 8280;8281 6897;6898 6897 2126 2 VALSDDETKETENMRK KEKKRGKRVALSDDET KETENMRKKRRRIKLP R V A R K K 1 1 1 2 0 0 3 0 0 0 1 2 1 0 0 1 2 0 0 1 0 0 16 2 1864.8837 Q15054;H0YD46 Q15054 304 319 POLD3 DNA polymerase delta subunit 3 yes no 3 0.0014055 77.192 By matching By MS/MS 1 1 12656000 4981100 7674600 3657 1540 3935 8282;8283 6899 6899 2126 1 VALTGLTVAEYFR EPPGARARVALTGLTV LTVAEYFRDQEGQDVL R V A F R D 2 1 0 0 0 0 1 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1438.782 P06576;F8W0P7;H0YH81 P06576 282 294 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 2.196E-05 105.4 By MS/MS By MS/MS 1 1 5449000 2315900 3133200 3658 1226 3936 8284;8285 6900;6901 6901 2 VAPEEHPVLLTEAPLNPK HTFYNELRVAPEEHPV TEAPLNPKANREKMTQ R V A P K A 2 0 1 0 0 0 3 0 1 0 3 1 0 0 4 0 1 0 0 2 0 0 18 0 1953.0571 P63261;P60709;I3L3I0;I3L1U9;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8 P63261 96 113 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 3 0.0051669 55.864 By MS/MS By MS/MS 1 1 5128500 2586400 2542100 3659 1422 3937 8286;8287 6902;6903 6903 2 VAPVINNGSPTILGK LSSLTPAKVAPVINNG GSPTILGKRSYEQHNG K V A G K R 1 0 2 0 0 0 0 2 0 2 1 1 0 0 2 1 1 0 0 2 0 0 15 0 1478.8457 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 360 374 MTA1 Metastasis-associated protein MTA1 yes no 2 0.00015084 90.476 By MS/MS By MS/MS 2 2 14210000 7343700 6866500 3660 588 3938;3939 8288;8289;8290;8291 6904;6905;6906 6904 93;94 786;3420 3 VASEAPLEHKPQVEASSPR YEELQGLKVASEAPLE QVEASSPRLNPAVTCA K V A P R L 3 1 0 0 0 1 3 0 1 0 1 1 0 0 3 3 0 0 0 2 0 0 19 1 2031.0385 Q8TD19 Q8TD19 853 871 NEK9 Serine/threonine-protein kinase Nek9 yes yes 3 0.0014452 70.121 By MS/MS By MS/MS 1 1 15097000 7796800 7300400 3661 1822 3940 8292;8293 6907;6908 6907 2567 2 VASPSQGQVGSSSPK TLTDAQTRVASPSQGQ QVGSSSPKRSGMTAVP R V A P K R 1 0 0 0 0 2 0 2 0 0 0 1 0 0 2 5 0 0 0 2 0 0 15 0 1414.7052 A0A0D9SF60;Q99569 Q99569 325 339 PKP4 Plakophilin-4 no no 2 0.0034464 63.864 By MS/MS By MS/MS 1 1 2007200 978180 1029100 3662 232;1939 3941 8294;8295 6909;6910;6911 6909 338;339 3 VASSPVMVSNPATR TTLPATVKVASSPVMV MVSNPATRMLKTAAAQ K V A T R M 2 1 1 0 0 0 0 0 0 0 0 0 1 0 2 3 1 0 0 3 0 0 14 0 1414.7238 P51610;A6NEM2 P51610 595 608 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.00061531 79.875 By MS/MS By MS/MS 2 2 19009000 9587400 9421900 3663 1394 3942;3943 8296;8297;8298;8299 6912;6913;6914 6914 185 1880;1881 2 VATAWLSPSGGR V A G R 2 1 0 0 0 0 0 2 0 0 1 0 0 0 1 2 1 1 0 1 0 0 12 0 1200.6251 REV__Q9UN75 yes no 2 0.021192 64.224 By MS/MS 1 414910 414910 0 + 3664 2216 3944 8300 6915 6915 3995 1 VATVSLPR SPATLNSRVATVSLPR VATVSLPRSCAAAGTE R V A P R S 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 8 0 841.50215 CON__P00761 CON__P00761 108 115 yes yes 2 0.0068877 114.78 By MS/MS By MS/MS 1 2 7364100 4363900 3000200 + 3665 499 3945 8301;8302;8303 6916;6917;6918;6919 6916 4 VAVATPAKK VVVSPTKKVAVATPAK AVATPAKKAAVTPGKK K V A K K A 3 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 1 0 0 2 0 0 9 1 883.5491 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 72 80 NCL Nucleolin yes no 2 0.018866 68.786 By MS/MS By matching 1 1 15465000 7840900 7623800 3666 1294 3946 8304;8305 6920 6920 3665 0 VAVFFSNTPTR RNGFLMRKVAVFFSNT FFSNTPTRASPQLREA K V A T R A 1 1 1 0 0 0 0 0 0 0 0 0 0 2 1 1 2 0 0 2 0 0 11 0 1237.6455 E7ENL6;P12111 E7ENL6 1903 1913 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.019008 59.153 By MS/MS By matching 1 1 1387500 788680 598870 3667 567 3947 8306;8307 6921 6921 1 VCEATYDTTLVEK YGVTTIVRVCEATYDT YDTTLVEKEGIHVLDW R V C E K E 1 0 0 1 1 0 2 0 0 0 1 1 0 0 0 0 3 0 1 2 0 0 13 0 1527.7127 A0A0D9SGK2;Q93096 A0A0D9SGK2 48 60 PTP4A1 Protein tyrosine phosphatase type IVA 1 yes no 2 0.00019943 82.494 By MS/MS 1 582010 582010 0 3668 240 3948 8308 6922 6922 4043 1 VCQQQPKLYLCK TQLSPEIKVCQQQPKL QPKLYLCKHLCESHRD K V C C K H 0 0 0 0 2 3 0 0 0 0 2 2 0 0 1 0 0 0 1 1 0 0 12 1 1563.7902 Q9H1F0 Q9H1F0 40 51 WFDC10A WAP four-disulfide core domain protein 10A yes yes 2 0.016688 42.864 By MS/MS 1 0 0 0 3669 1993 3949 8309 6923 6923 4433 1 VDDDSLGEFPVTNSR KRGAPDPRVDDDSLGE EFPVTNSRARKRILEP R V D S R A 0 1 1 3 0 0 1 1 0 0 1 0 0 1 1 2 1 0 0 2 0 0 15 0 1649.7533 J3KMZ8;Q92785 J3KMZ8 138 152 DPF2 Zinc finger protein ubi-d4 yes no 2 0.0038114 62.377 By MS/MS By MS/MS 1 1 8162500 3871400 4291100 3670 995 3950 8310;8311 6924;6925 6925 1331 2 VDDETMEVKRSFR V D F R 0 2 0 2 0 0 2 0 0 0 0 1 1 1 0 1 1 0 0 2 0 0 13 2 1610.7723 REV__B1AQN8 yes no 3 0.022465 43.184 By MS/MS 1 617230 617230 0 + 3671 2184 3951 8312 6926 6926 3991 0 VDDKPSSPGDSSKK ERERGTSRVDDKPSSP SPGDSSKKRGPKPRKE R V D K K R 0 0 0 3 0 0 0 1 0 0 0 3 0 0 2 4 0 0 0 1 0 0 14 2 1445.6998 Q9HC52;C9JM54;C9J6K3 Q9HC52 185 198 CBX8 Chromobox protein homolog 8 yes no 3 0.00044083 91.14 By MS/MS By MS/MS 1 1 4299900 2037600 2262300 3672 2027 3952 8313;8314 6927;6928 6927 2896 2 VDNDENEHQLSLR ADKDYHFKVDNDENEH NEHQLSLRTVSLGAGA K V D L R T 0 1 2 2 0 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1567.7227 P06748;E5RGW4 P06748 33 45 NPM1 Nucleophosmin yes no 3 0.013915 72.705 By MS/MS By MS/MS 1 1 3040100 1333800 1706300 3673 1228 3953 8315;8316 6929;6930 6930 2 VDNLTYRTSPDTLR VEGMTSLKVDNLTYRT RTSPDTLRRVFEKYGR K V D L R R 0 2 1 2 0 0 0 0 0 0 2 0 0 0 1 1 3 0 1 1 0 0 14 1 1649.8373 J3QL05;J3KP15;Q01130 J3QL05 18 31 SRSF2 Serine/arginine-rich splicing factor 2 yes no 3 0.0007435 80.469 By matching By MS/MS 1 1 9327700 4381900 4945800 3674 1002 3954 8317;8318 6931 6931 1338;3558 1 VDNLTYRTSPDTLRR VEGMTSLKVDNLTYRT TSPDTLRRVFEKYGRV K V D R R V 0 3 1 2 0 0 0 0 0 0 2 0 0 0 1 1 3 0 1 1 0 0 15 2 1805.9384 J3QL05;J3KP15;Q01130 J3QL05 18 32 SRSF2 Serine/arginine-rich splicing factor 2 yes no 3 0.015152 65.477 By matching By MS/MS 1 1 9864800 4283800 5580900 3675 1002 3955 8319;8320 6932 6932 1338;3558 1 VDSEGDFSENDDAAGDFR EPDTKLARVDSEGDFS DDAAGDFRSGDEEFKG R V D F R S 2 1 1 5 0 0 2 2 0 0 0 0 0 2 0 2 0 0 0 1 0 0 18 0 1944.761 M0QYL4;O43823 M0QYL4 135 152 AKAP8 A-kinase anchor protein 8 yes no 2 0.013004 50.966 By matching By MS/MS 1 1 2714400 1063600 1650700 3676 1064 3956 8321;8322 6933 6933 1399 1 VDSPTVNTTLR GSWYKACKVDSPTVNT PTVNTTLRSLGALYRR K V D L R S 0 1 1 1 0 0 0 0 0 0 1 0 0 0 1 1 3 0 0 2 0 0 11 0 1201.6303 Q9H0B6;A8MZ87 Q9H0B6 443 453 KLC2 Kinesin light chain 2 yes no 2 0.0076806 66.056 By MS/MS By matching 1 1 1722000 774670 947350 3677 1988 3957 8323;8324 6934 6934 2839 1 VDYVVVDQQK GSSVADERVDYVVVDQ YVVVDQQKTLALKSTR R V D Q K T 0 0 0 2 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 4 0 0 10 0 1191.6136 B7Z3B9;Q13480 B7Z3B9 554 563 GAB1 GRB2-associated-binding protein 1 yes no 2 0.0027488 78.939 By MS/MS By matching 1 1 1621500 600760 1020700 3678 406 3958 8325;8326 6935;6936 6935 4099 2 VEEEQEADEEDVSEEEAESK ESAQPLKKVEEEQEAD SEEEAESKEGTNKDFP K V E S K E 2 0 0 2 0 1 10 0 0 0 0 1 0 0 0 2 0 0 0 2 0 0 20 0 2308.919 Q9H3N1 Q9H3N1 235 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 1.9845E-83 154.84 By MS/MS By MS/MS 1 1 19511000 8452100 11059000 3679 2002 3959 8327;8328 6937;6938 6938 2864 2 VEEESTGDPFGFDSDDESLPVSSK QEIPKKPKVEEESTGD ESLPVSSKNLAQVKCS K V E S K N 0 0 0 4 0 0 4 2 0 0 1 1 0 2 2 5 1 0 0 2 0 0 24 0 2572.0977 Q7Z5K2 Q7Z5K2 64 87 WAPAL Wings apart-like protein homolog yes yes 3 0.014039 42.041 By MS/MS By MS/MS 1 1 13719000 6595300 7123500 3680 1717 3960 8329;8330 6939;6940 6940 2412;2413 2 VEEFLYEKLDR ________________ FLYEKLDRKVPSRVTN - V E D R K 0 1 0 1 0 0 3 0 0 0 2 1 0 1 0 0 0 0 1 1 0 0 11 1 1439.7296 H7C1Z6;F8WFB9;B7ZC39;B7ZC38;Q9NR46 H7C1Z6 1 11 SH3GLB2 Endophilin-B2 yes no 2 0.0022239 94.297 By MS/MS By MS/MS 1 1 4350500 1659100 2691400 3681 414 3961 8331;8332 6941;6942 6942 4100 2 VEGDNIYVR EGKKNSLRVEGDNIYV EGDNIYVRHSNLMLEE R V E V R H 0 1 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 2 0 0 9 0 1063.5298 O43491;H0Y5B0;E9PMV8;E9PPC9;Q6ZSX4 O43491 617 625 EPB41L2 Band 4.1-like protein 2 yes no 2 0.0011133 119.41 By MS/MS By MS/MS 1 1 86574000 37628000 48946000 3682 1125 3962 8333;8334 6943;6944 6943 4240 2 VEILANDQGNR VGVFQQGRVEILANDQ LANDQGNRTTPSYVAF R V E N R T 1 1 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1227.6208 P48741;P17066 P48741 28 38 HSPA7;HSPA6 Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 6 yes no 2 0.0076312 71.349 By MS/MS By MS/MS 1 1 6634500 2853100 3781400 3683 1280 3963 8335;8336 6945;6946 6945 2 VEKIGEGTYGVVYK ________________ GTYGVVYKARNKLTGE K V E Y K A 0 0 0 0 0 0 2 3 0 1 0 2 0 0 0 0 1 0 2 3 0 0 14 1 1540.8137 E7ESI2;G3V5T9;P24941;G3V317;K7ELV5;Q00526 E7ESI2 7 20 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 3 9.2616E-05 97.631 By matching By MS/MS 1 1 1347900 716860 631020 3684 584 3964 8337;8338 6947 6947 3418;4143;4144 1 VELQELNDR KNTRTNEKVELQELND ELQELNDRFANYIDKV K V E D R F 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1114.5619 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;P17661 P08670 105 113 VIM;DES Vimentin;Desmin yes no 2 0.0032674 91.069 By MS/MS By MS/MS 1 1 2584800 1125900 1458800 3685 1243 3965 8339;8340 6948;6949 6948 2 VEMYSGSDDDDDFNKLPK SKKTAKPKVEMYSGSD DDFNKLPKKAKGKAQK K V E P K K 0 0 1 5 0 0 1 1 0 0 1 2 1 1 1 2 0 0 1 1 0 0 18 1 2073.8837 A0A087WUT6;O60841 A0A087WUT6 131 148 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 0.0036713 84.821 By MS/MS By MS/MS 2 2 39648000 15851000 23797000 3686 43 3966 8341;8342;8343;8344 6950;6951;6952 6950 57;58;4004 3 VEMYSGSDDDDDFNKLPKK SKKTAKPKVEMYSGSD DFNKLPKKAKGKAQKS K V E K K A 0 0 1 5 0 0 1 1 0 0 1 3 1 1 1 2 0 0 1 1 0 0 19 2 2201.9787 A0A087WUT6;O60841 A0A087WUT6 131 149 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.011219 45.618 By MS/MS By matching 1 1 5628800 1691600 3937100 3687 43 3967 8345;8346 6953 6953 57;58;4004 1 VEQATKPSFESGR SLDGKAIKVEQATKPS KPSFESGRRGPPPPPR K V E G R R 1 1 0 0 0 1 2 1 0 0 0 1 0 1 1 2 1 0 0 1 0 0 13 1 1434.7103 H0Y6E7;H3BT71;P38159 H0Y6E7 83 95 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 2 0.015388 65.472 By matching By MS/MS 1 1 6734200 3195600 3538700 3688 837 3968 8347;8348 6954 6954 1129 1 VEQMPQASPGLAPR SGELVEPRVEQMPQAS ASPGLAPRTRGSSGPQ R V E P R T 2 1 0 0 0 2 1 1 0 0 1 0 1 0 3 1 0 0 0 1 0 0 14 0 1479.7504 Q8N3F8;H0Y6J8 Q8N3F8 571 584 MICALL1 MICAL-like protein 1 yes no 2 0.00020465 82.908 By MS/MS By MS/MS 2 2 6663400 3089000 3574500 3689 1774 3969;3970 8349;8350;8351;8352 6955;6956;6957 6956 257 2495 3 VFAVVITDGR ESRRQKTRVFAVVITD AVVITDGRHDPRDDDL R V F G R H 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 3 0 0 10 0 1075.6026 P12110 P12110 725 734 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.0088022 73.985 By MS/MS By MS/MS 1 1 9822200 5830500 3991700 3690 1263 3971 8353;8354 6958;6959 6959 2 VFCARGGNSLSDYKQVLGPQCLSYEVER FSDSKRVRVFCARGGN CLSYEVERQPGEQEIK R V F E R Q 1 2 1 1 2 2 2 3 0 0 3 1 0 1 1 3 0 0 2 3 0 0 28 2 3231.5441 Q9ULC6 Q9ULC6 213 240 PADI1 Protein-arginine deiminase type-1 yes yes 3 0.0094963 42.172 By MS/MS 1 4612100 0 4612100 3691 2117 3972 8355 6960 6960 457;458 3029;3030;4461 1 VFDEFKPLVEEPQNLIK DPHECYAKVFDEFKPL EEPQNLIKQNCELFEQ K V F I K Q 0 0 1 1 0 1 3 0 0 1 2 2 0 2 2 0 0 0 0 2 0 0 17 1 2044.0881 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 397 413 ALB Serum albumin yes no 3 0.012227 45.723 By MS/MS By matching 1 1 5915400 3366600 2548800 + 3692 209 3973 8356;8357 6961 6961 1 VFDKDGNGYISAAELR EEIREAFRVFDKDGNG YISAAELRHVMTNLGE R V F L R H 2 1 1 2 0 0 1 2 0 1 1 1 0 1 0 1 0 0 1 1 0 0 16 1 1753.8635 G3V361;Q96HY3;P0DP25;P0DP24;P0DP23;E7ETZ0;H0Y7A7;E7EMB3 G3V361 56 71 CALM1;CALM2 yes no 2 8.5838E-06 96.82 By MS/MS 1 2444300 0 2444300 3693 557 3974 8358 6962 6962 4138 1 VFDLQFSTDSPR RLQRRRSRVFDLQFST QFSTDSPRLLASPSSR R V F P R L 0 1 0 2 0 1 0 0 0 0 1 0 0 2 1 2 1 0 0 1 0 0 12 0 1410.6779 C9JZP1;C9J470;E9PHA2;Q15003 C9JZP1 72 83 NCAPH Condensin complex subunit 2 yes no 2 3.625E-11 131.69 By MS/MS By MS/MS 1 1 2377300 1087100 1290200 3694 440 3975 8359;8360 6963;6964 6964 633;634;3362 2 VFEVSLADLQNDEVAFR ASDGLKGRVFEVSLAD QNDEVAFRKFKLITED R V F F R K 2 1 1 2 0 1 2 0 0 0 2 0 0 2 0 1 0 0 0 3 0 0 17 0 1950.9687 D6RAT0;P61247;D6RGE0;D6RI02;D6RED7;D6RAS7;H0Y8L7;D6RB09;E9PFI5;D6RG13 D6RAT0 29 45 RPS3A 40S ribosomal protein S3a yes no 2 0.002242 77.279 By MS/MS By matching 1 1 4787200 2965500 1821800 3695 527 3976 8361;8362 6965 6965 1 VFIDQNLSPGK IEANGELKVFIDQNLS DQNLSPGKGVVSLVAV K V F G K G 0 0 1 1 0 1 0 1 0 1 1 1 0 1 1 1 0 0 0 1 0 0 11 0 1216.6452 Q5JSB5;Q14186;F5H452;Q5JSB6 Q5JSB5 16 26 TFDP1 Transcription factor Dp-1 yes no 2 0.0074473 66.498 By MS/MS By matching 1 1 778860 317410 461450 3696 1516 3977 8363;8364 6966 6966 2075 1 VFLENVIR EETRGVLKVFLENVIR VFLENVIRDAVTYTEH K V F I R D 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 8 0 988.57057 P62805 P62805 61 68 HIST1H4A Histone H4 yes yes 2 0.010874 92.47 By MS/MS By matching 1 1 4809000 1515500 3293500 3697 1432 3978 8365;8366 6967 6967 1 VFSNGADLSGVTEEAPLK LGQLGITKVFSNGADL VTEEAPLKLSKVRSP_ K V F L K L 2 0 1 1 0 0 2 2 0 0 2 1 0 1 1 2 1 0 0 2 0 0 18 0 1832.9156 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 335 352 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.005346 71.176 By MS/MS 1 283730 283730 0 3698 1 3979 8367 6968 6968 1 1 VGATDPNSGSGRASSTRTR RPGAAHLRVGATDPNS RASSTRTRRAPGGLGL R V G T R R 2 3 1 1 0 0 0 3 0 0 0 0 0 0 1 4 3 0 0 1 0 0 19 2 1875.9147 F8WEC8 F8WEC8 56 74 PMPCB yes yes 2 0.0046186 47.904 By MS/MS 1 229400 0 229400 3699 771 3980 8368 6969 6969 114 1027;3487;3488 1 VGDGDLSAEEIPENEVSLR TMEEQKTKVGDGDLSA PENEVSLRRAVSKKKT K V G L R R 1 1 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 0 19 0 2027.9647 Q14684 Q14684 239 257 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 3.1471E-98 167.28 By MS/MS 1 26697000 0 26697000 3700 1526 3981 8369 6970 6970 2102 1 VGDGDLSAEEIPENEVSLRR TMEEQKTKVGDGDLSA ENEVSLRRAVSKKKTA K V G R R A 1 2 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 0 20 1 2184.0659 Q14684 Q14684 239 258 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 3 0.0085255 45.384 By matching By MS/MS 1 1 13457000 6588000 6868800 3701 1526 3982 8370;8371 6971 6971 2102 1 VGDPPQPLPEEPMEVQGAERASPEPQR AILRYVRRVGDPPQPL RASPEPQRENASPAPG R V G Q R E 2 2 0 1 0 3 5 2 0 0 1 0 1 0 7 1 0 0 0 2 0 0 27 1 2939.4083 H0Y710;A0A0G2JL47;A0A024RCR6;A0A0G2JK23;P46379 H0Y710 86 112 BAG6;BAT3 Large proline-rich protein BAG6 yes no 3 0.0095847 42.454 By matching By MS/MS 1 1 4271000 2128000 2142900 3702 3 3983 8372;8373 6972 6972 1 1 VGDTEKPEPERSPPNR EPKARPLRVGDTEKPE PERSPPNRKRPANEKA R V G N R K 0 2 1 1 0 0 3 1 0 0 0 1 0 0 4 1 1 0 0 1 0 0 16 2 1806.886 Q9NZ63 Q9NZ63 250 265 C9orf78 Uncharacterized protein C9orf78 yes yes 3 1.6846E-46 149.57 By MS/MS By MS/MS 1 1 39933000 25981000 13952000 3703 2075 3984 8374;8375 6973;6974;6975;6976 6976 2983 4 VGDVTPQVK KAAPAPGKVGDVTPQV GDVTPQVKGGALPPAK K V G V K G 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 1 0 0 3 0 0 9 0 941.5182 J3KQ96;E7ETY2;Q13428 J3KQ96 245 253 TCOF1 Treacle protein yes no 2 0.0001508 84.507 By MS/MS 1 0 0 0 3704 591 3985 8376 6977 6977 3423 1 VGEEEHVYSFPNK SVGSPCSRVGEEEHVY HVYSFPNKQKSAEPSP R V G N K Q 0 0 1 0 0 0 3 1 1 0 0 1 0 1 1 1 0 0 1 2 0 0 13 0 1533.71 F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023 F5H836 112 124 PXN Paxillin yes no 2;3 0.00032779 90.853 By MS/MS By matching 2 1 9432500 7429700 2002900 3705 288 3986 8377;8378;8379 6978;6979 6979 410;4055 2 VGEEEHVYSFPNKQK SVGSPCSRVGEEEHVY YSFPNKQKSAEPSPTV R V G Q K S 0 0 1 0 0 1 3 1 1 0 0 2 0 1 1 1 0 0 1 2 0 0 15 1 1789.8635 F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023 F5H836 112 126 PXN Paxillin yes no 3 0.000116 80.371 By MS/MS By MS/MS 1 1 6524400 3557700 2966700 3706 288 3987 8380;8381 6980;6981 6981 410;4055 2 VGGHAAEYGAEALER NVKAAWGKVGGHAAEY YGAEALERMFLSFPTT K V G E R M 4 1 0 0 0 0 3 3 1 0 1 0 0 0 0 0 0 0 1 1 0 0 15 0 1528.727 CON__P01966 CON__P01966 18 32 yes yes 3 0.0021089 67.095 By MS/MS By matching 1 1 793890 356040 437850 + 3707 501 3988 8382;8383 6982 6982 1 VGGSDEEASGIPSR LEGMKKARVGGSDEEA EASGIPSRTASLELDL R V G S R T 1 1 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 14 0 1359.6266 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 H7C446 116 129 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2 1.2335E-168 201.72 By MS/MS By MS/MS 1 1 130840000 69920000 60923000 3708 189 3989 8384;8385 6983;6984 6984 271 2 VGGSSVDLHR YGPQPQVRVGGSSVDL GSSVDLHRFHPEPYGL R V G H R F 0 1 0 1 0 0 0 2 1 0 1 0 0 0 0 2 0 0 0 2 0 0 10 0 1025.5254 C9JZR2;O60716;E9PRE2 C9JZR2 265 274 CTNND1 Catenin delta-1 yes no 2 0.00083571 107.34 By MS/MS By MS/MS 2 2 6898300 3581900 3316400 3709 495 3990 8386;8387;8388;8389 6985;6986;6987;6988 6985 684;685 4 VGNESPVQELK ETENTAYKVGNESPVQ ESPVQELKQDVSKKII K V G L K Q 0 0 1 0 0 1 2 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 11 0 1198.6194 Q5JSH3 Q5JSH3 46 56 WDR44 WD repeat-containing protein 44 yes yes 2 2.863E-06 126.32 By MS/MS By MS/MS 1 1 26318000 11920000 14398000 3710 1606 3991 8390;8391 6989;6990 6989 2228 2 VGNKTNEVWANIK V G I K 1 0 3 0 0 0 1 1 0 1 0 2 0 0 0 0 1 1 0 2 0 0 13 1 1471.7783 REV__A0A087WWJ8 yes no 2 0.022465 43.512 By MS/MS By matching 1 1 3935200 1980800 1954400 + 3711 2182 3992 8392;8393 6991 6991 3990 0 VGNNSSHFLQPNVR GGMCEERKVGNNSSHF HFLQPNVRGPLFLCED K V G V R G 0 1 3 0 0 1 0 1 1 0 1 0 0 1 1 2 0 0 0 2 0 0 14 0 1567.7855 Q92543 Q92543 349 362 SNX19 Sorting nexin-19 yes yes 2 0.010939 62.166 By MS/MS 1 0 0 0 3712 1849 3993 8394 6992 6992 260;437 1 VGPTYSTAR NTVHLDPKVGPTYSTA GPTYSTARLSILTPRH K V G A R L 1 1 0 0 0 0 0 1 0 0 0 0 0 0 1 1 2 0 1 1 0 0 9 0 950.48214 H0YBK2;Q9NYQ8 H0YBK2 606 614 FAT2 Protocadherin Fat 2 yes no 2 0.0077624 79.469 By MS/MS 1 0 0 0 3713 867 3994 8395 6993 6993 3519 1 VGPVSAVGLT YGFHGGQRVGPVSAVG PVSAVGLT________ R V G L T - 1 0 0 0 0 0 0 2 0 0 1 0 0 0 1 1 1 0 0 3 0 0 10 0 898.51238 A0A140T956 A0A140T956 2271 2280 yes yes 2 0.016341 79.148 By MS/MS By matching 1 1 56817000 25772000 31045000 3714 282 3995 8396;8397 6994 6994 3312 1 VGQGYVYEAAQPEQDEYDIPR AKVVVPTRVGQGYVYE QDEYDIPRHLLAPGPQ R V G P R H 2 1 0 2 0 3 3 2 0 1 0 0 0 0 2 0 0 0 3 2 0 0 21 0 2426.1026 H3BN62;P56945 H3BN62 85 105 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 3 0.0061262 43.12 By MS/MS 1 1450700 1450700 0 3715 910 3996 8398 6995 6995 4196;4197 1 VGSLDNVGHLPAGGAVK FKEKAQAKVGSLDNVG LPAGGAVKTEGGGSEA K V G V K T 2 0 1 1 0 0 0 4 1 0 2 1 0 0 1 1 0 0 0 3 0 0 17 0 1589.8526 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4 E7EVA0 2216 2232 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 3.7171E-22 125.98 By MS/MS By MS/MS 2 2 84598000 31824000 52774000 3716 596 3997 8399;8400;8401;8402 6996;6997;6998;6999 6998 819 4 VGSLPLEKGSPVTTTK AEAIPEGKVGSLPLEK GSPVTTTKADPRASGK K V G T K A 0 0 0 0 0 0 1 2 0 0 2 2 0 0 2 2 3 0 0 2 0 0 16 1 1612.9036 Q7Z2K8 Q7Z2K8 606 621 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 2;3 0.0020917 83.54 By MS/MS By MS/MS 2 2 6003500 2757300 3246200 3717 1708 3998 8403;8404;8405;8406 7000;7001;7002 7002 2389;3829;3830 3 VGSLTPPSSPK PPAVQGQKVGSLTPPS LTPPSSPKTQRAGHRR K V G P K T 0 0 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 1 0 0 11 0 1068.5815 E9PG46;Q2M2I8 E9PG46 616 626 AAK1 AP2-associated protein kinase 1 yes no 2 1.9793E-06 129.37 By MS/MS By MS/MS 1 1 9490400 4701400 4789000 3718 630 3999 8407;8408 7003;7004 7004 851;852;3433 2 VGSQYRLEDRVTYYCNR GIPLGTRKVGSQYRLE RVTYYCNRGLTLRGSE K V G N R G 0 3 1 1 1 1 1 1 0 0 1 0 0 0 0 1 1 0 3 2 0 0 17 2 2178.0276 CON__Q3KUS7 CON__Q3KUS7 177 193 yes yes 3 0.0099444 43.592 By MS/MS 1 0 0 0 + 3719 509 4000 8409 7005 7005 368 694;3385;4127;4128;4129 1 VGVEASEETPQTSSSSARPGTPSDHQSQEASQFER KEGEKTDRVGVEASEE QEASQFERKDEPKTEQ R V G E R K 3 2 0 1 0 4 5 2 1 0 0 0 0 1 3 8 3 0 0 2 0 0 35 1 3702.663 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1 I1E4Y6 384 418 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 4 2.3369E-14 70.151 By MS/MS 1 21417000 0 21417000 3720 979 4001 8410 7006 7006 3554 1 VGVNDFCPMGFGVK LHSNNITKVGVNDFCP CPMGFGVKRAYYNGIS K V G V K R 0 0 1 1 1 0 0 3 0 0 0 1 1 2 1 0 0 0 0 3 0 0 14 0 1525.7058 P21810 P21810 315 328 BGN Biglycan yes yes 2 0.01929 45.598 By MS/MS 1 439550 439550 0 3721 1303 4002 8411 7007 7007 172 0 VGVVQYSHEGTFEAIQLDDER PKSETGTRVGVVQYSH AIQLDDERIDSLSSFK R V G E R I 1 1 0 2 0 2 3 2 1 1 1 0 0 1 0 1 1 0 1 3 0 0 21 0 2391.1343 P12110;H7C0M5 P12110 660 680 COL6A2 Collagen alpha-2(VI) chain yes no 3 0.0013577 75.017 By MS/MS By MS/MS 1 1 4069800 2008400 2061400 3722 1263 4003 8412;8413 7008;7009 7008 2 VGVVQYSHEGTFEAIQLDDERIDSLSSFK PKSETGTRVGVVQYSH IDSLSSFKEAVKNLEW R V G F K E 1 1 0 3 0 2 3 2 1 2 2 1 0 2 0 4 1 0 1 3 0 0 29 1 3268.5888 P12110;H7C0M5 P12110 660 688 COL6A2 Collagen alpha-2(VI) chain yes no 4 0.019023 34.106 By MS/MS By matching 1 1 1211600 932510 279050 3723 1263 4004 8414;8415 7010 7010 1 VHDRSEEEEEEEEEEEEEQPRR YSINDENRVHDRSEEE EEEEQPRRRVQRKRAN R V H R R R 0 3 0 1 0 1 13 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 22 2 2827.1652 V9GYQ9;Q5TAQ8;V9GY54;G3V3G9;Q5TAQ9 V9GYQ9 70 91 DCAF8 DDB1- and CUL4-associated factor 8 yes no 4 0.01527 47.942 By matching By MS/MS 1 1 6738100 2774000 3964000 3724 792 4005 8416;8417 7011 7011 1052 1 VHGEPTSDLSDID RAMNHLSRVHGEPTSD TSDLSDID________ R V H I D - 0 0 0 3 0 0 1 1 1 1 1 0 0 0 1 2 1 0 0 1 0 0 13 0 1383.6154 O95696 O95696 1046 1058 BRD1 Bromodomain-containing protein 1 yes yes 2 0.0054073 71.268 By MS/MS By MS/MS 3 3 20372000 10091000 10281000 3725 1197 4006;4007 8418;8419;8420;8421;8422;8423 7012;7013;7014;7015;7016 7012 1600;1601;3636 5 VHSEAISPAPEEK IVHAVGERVHSEAISP ISPAPEEKAVTLRSLR R V H E K A 2 0 0 0 0 0 3 0 1 1 0 1 0 0 2 2 0 0 0 1 0 0 13 0 1392.6885 Q9BY89 Q9BY89 743 755 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.0096892 60.08 By MS/MS By matching 1 1 1823000 944120 878900 3726 1977 4008 8424;8425 7017 7017 2811 1 VHSENNACINFK KPANQVKRVHSENNAC NNACINFKTSSTGKES R V H F K T 1 0 3 0 1 0 1 0 1 1 0 1 0 1 0 1 0 0 0 1 0 0 12 0 1431.6565 C9JWL6;F8WF96;C9IYJ9;O94921 C9JWL6 47 58 CDK14 Cyclin-dependent kinase 14 yes no 2 0.0074924 63.966 By MS/MS By matching 1 1 1643100 769810 873260 3727 426 4009 8426;8427 7018 7018 602 1 VHVQFFDDSPTR REKGKSVRVHVQFFDD FFDDSPTRGWVSKRLL R V H T R G 0 1 0 2 0 1 0 0 1 0 0 0 0 2 1 1 1 0 0 2 0 0 12 0 1446.6892 A0A087WWJ1;P52701;U3KQ72;C9JH55;C9J8Y8;C9J7Y7;F8WAX8 A0A087WWJ1 128 139 MSH6 DNA mismatch repair protein Msh6 yes no 2;3 0.0015151 82.069 By MS/MS By MS/MS 2 2 12388000 5718700 6669500 3728 64 4010 8428;8429;8430;8431 7019;7020;7021 7019 84 3 VIEDDPEAVYTTTGGKIPVR VSDFGLSRVIEDDPEA TGGKIPVRWTAPEAIQ R V I V R W 1 1 0 2 0 0 2 2 0 2 0 1 0 0 2 0 3 0 1 3 0 0 20 1 2159.111 Q15375 Q15375 782 801 EPHA7 Ephrin type-A receptor 7 yes yes 3 0.0051053 57.173 By matching By MS/MS 1 1 5520800 2858400 2662400 3729 1553 4011 8432;8433 7022 7022 4355 1 VIEDNEYTAR IADFGLARVIEDNEYT EDNEYTAREGAKFPIK R V I A R E 1 1 1 1 0 0 2 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 10 0 1208.5673 P07948;H0Y3C5;J3KPD6;P08631 P07948 391 400 LYN;HCK Tyrosine-protein kinase Lyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase HCK yes no 2 2.0635E-05 123.21 By MS/MS By MS/MS 1 1 9367600 4319000 5048600 3730 1235 4012 8434;8435 7023;7024;7025;7026 7025 4262 4 VIEDNEYTAREGAK IADFGLARVIEDNEYT YTAREGAKFPIKWTAP R V I A K F 2 1 1 1 0 0 3 1 0 1 0 1 0 0 0 0 1 0 1 1 0 0 14 1 1593.7635 P07948;H0Y3C5;J3KPD6;P08631 P07948 391 404 LYN;HCK Tyrosine-protein kinase Lyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase HCK yes no 3 0.0068287 58.116 By MS/MS By matching 1 1 1468300 665970 802300 3731 1235 4013 8436;8437 7027 7027 4262 1 VIFSGSLDFFSDSFFNSAVQK LQARNNARVIFSGSLD FFNSAVQKAAPGSQRY R V I Q K A 1 0 1 2 0 1 0 1 0 1 1 1 0 5 0 5 0 0 0 2 0 0 21 0 2341.1267 A0A0C4DGS1;P39656 A0A0C4DGS1 238 258 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 2 0.0022128 69.258 By MS/MS 1 2013800 2013800 0 3732 218 4014 8438 7028 7028 1 VIGSGCNLDSAR LSGLPKHRVIGSGCNL GCNLDSARFRYLMAEK R V I A R F 1 1 1 1 1 0 0 2 0 1 1 0 0 0 0 2 0 0 0 1 0 0 12 0 1247.5928 A8MW50;P07195;F5H5G7;F5H155;A0A087WUM2;G3XAP5;F5H245;Q6ZMR3;P07864;P00338 A8MW50 159 170 LDHB;LDHC;LDHAL6A;LDHA L-lactate dehydrogenase;L-lactate dehydrogenase B chain;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase A chain no no 2 1.4109E-10 128.03 By MS/MS By MS/MS 1 1 3770900 1341200 2429700 3733 340;1201 4015 8439;8440 7029;7030 7030 2 VIHLQFNNIASITDDTFCK LNLPESLRVIHLQFNN ITDDTFCKANDTSYIR R V I C K A 1 0 2 2 1 1 0 0 1 3 1 1 0 2 0 1 2 0 0 1 0 0 19 0 2235.0994 P20774 P20774 238 256 OGN Mimecan yes yes 3 0.014629 60.949 By MS/MS By MS/MS 2 2 6406400 2693600 3712800 3734 1301 4016;4017 8441;8442;8443;8444 7031;7032 7031 182;183 2 VIILQGSK NNIERVEKVIILQGSK VIILQGSKSVELKKKV K V I S K S 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 1 0 0 0 1 0 0 8 0 856.5382 Q495X7 Q495X7 161 168 TRIM60 Tripartite motif-containing protein 60 yes yes 2 0.011741 83.647 By matching By MS/MS 1 1 3435300 1576200 1859100 3735 1587 4018 8445;8446 7033 7033 2194 1 VIKDEALSDGDDLR TVKSENLKVIKDEALS LSDGDDLRDFPSDLKK K V I L R D 1 1 0 4 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 1 0 0 14 1 1544.7682 E7EUB5;Q01831 E7EUB5 81 94 XPC DNA repair protein complementing XP-C cells yes no 2 0.00055066 83.37 By MS/MS By MS/MS 1 1 4019600 1829800 2189900 3736 593 4019 8447;8448 7034;7035 7034 805 2 VILASPETSSAK PDGAGTGKVILASPET SPETSSAKQLIFTTSD K V I A K Q 2 0 0 0 0 0 1 0 0 1 1 1 0 0 1 3 1 0 0 1 0 0 12 0 1201.6554 C9JKS0;P49116 C9JKS0 83 94 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.0076423 63.602 By MS/MS By MS/MS 1 1 1710300 769500 940810 3737 468 4020 8449;8450 7036;7037 7037 655 2 VIQPMGMSPR APFPNRNRVIQPMGMS QPMGMSPRGHLTSLQD R V I P R G 0 1 0 0 0 1 0 1 0 1 0 0 2 0 2 1 0 0 0 1 0 0 10 0 1114.5627 H0YE35;Q9NPQ8 H0YE35 111 120 RIC8A Synembryn-A yes no 2 0.013194 65.465 By MS/MS By MS/MS 2 2 4616200 2306000 2310200 3738 878 4021;4022 8451;8452;8453;8454 7038;7039;7040 7040 104;105 1184 3 VIQYLAYVASSHK GKTENTKKVIQYLAYV AYVASSHKSKKDQGEL K V I H K S 2 0 0 0 0 1 0 0 1 1 1 1 0 0 0 2 0 0 2 2 0 0 13 0 1477.7929 P35579;Q5BKV1 P35579 187 199 MYH9 Myosin-9 yes no 3 0.011477 55.899 By MS/MS By MS/MS 1 1 926640 488450 438190 3739 1340 4023 8455;8456 7041;7042 7042 2 VISGTTLGYLSPK EMEASRHKVISGTTLG TLGYLSPKDMNQPSSS K V I P K D 0 0 0 0 0 0 0 2 0 1 2 1 0 0 1 2 2 0 1 1 0 0 13 0 1334.7446 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 43 55 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 2 0.0075786 62.035 By MS/MS By MS/MS 1 1 3502200 1578100 1924100 3740 177 4024 8457;8458 7043;7044 7043 250;4029 2 VISRPPPSVSPPK PSLRSPPRVISRPPPS PPSVSPPKCIQMERHV R V I P K C 0 1 0 0 0 0 0 0 0 1 0 1 0 0 5 3 0 0 0 2 0 0 13 1 1359.7874 A0A0C4DGG3;Q8NHM5 A0A0C4DGG3 390 402 KDM2B Lysine-specific demethylase 2B yes no 3 0.009855 60.631 By MS/MS By MS/MS 1 1 0 0 0 3741 210 4025;4026 8459;8460 7045;7046 7046 304;305 2 VIYDFIEK LKDRETSKVIYDFIEK VIYDFIEKTGGVEAVK K V I E K T 0 0 0 1 0 0 1 0 0 2 0 1 0 1 0 0 0 0 1 1 0 0 8 0 1025.5433 O00401 O00401 254 261 WASL Neural Wiskott-Aldrich syndrome protein yes yes 2 1.3402E-22 157.33 By MS/MS By MS/MS 1 1 27448000 12828000 14620000 3742 1085 4027 8461;8462 7047;7048 7048 4226 2 VIYSQPSAR KKGTSSKKVIYSQPSA IYSQPSARSEGEFKQT K V I A R S 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 2 0 0 1 1 0 0 9 0 1019.54 A0A087WY82;Q9Y624 A0A087WY82 258 266 F11R Junctional adhesion molecule A yes no 2 0.003207 85.161 By MS/MS By MS/MS 2 2 5728100 2859700 2868400 3743 80 4028 8463;8464;8465;8466 7049;7050;7051 7050 4013 3 VKESSIIAPAPAEDVDTPPR CRQVYEFRVKESSIIA EDVDTPPRKKKRKHRL R V K P R K 3 1 0 2 0 0 2 0 0 2 0 1 0 0 4 2 1 0 0 2 0 0 20 1 2091.0848 Q15910 Q15910 471 490 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 2;3 0.01167 79.332 By MS/MS By MS/MS 2 2 11847000 9002200 2844600 3744 1570 4029 8467;8468;8469;8470 7052;7053 7053 3771 2 VKMPEQEYEFPEPR LEKAKNARVKMPEQEY EYEFPEPRNLNNNMRR R V K P R N 0 1 0 0 0 1 4 0 0 0 0 1 1 1 3 0 0 0 1 1 0 0 14 1 1777.8345 Q9H6X2 Q9H6X2 418 431 ANTXR1 Anthrax toxin receptor 1 yes yes 3 0.0010859 72.815 By MS/MS By matching 1 1 1565300 742830 822430 3745 2013 4030 8471;8472 7054 7054 4437 1 VKPASPVAQPK SQGKTEVKVKPASPVA ASPVAQPKEEAKTETE K V K P K E 2 0 0 0 0 1 0 0 0 0 0 2 0 0 3 1 0 0 0 2 0 0 11 1 1120.6604 Q96EV2;H0Y3K4 Q96EV2 761 771 RBM33 RNA-binding protein 33 yes no 2 0.017819 67.118 By matching By MS/MS 1 1 6171900 2991400 3180500 3746 1889 4031 8473;8474 7055 7055 2669 1 VKVDGPRSPSYGR EGETAYIRVKVDGPRS PRSPSYGRSRSRSRSR R V K G R S 0 2 0 1 0 0 0 2 0 0 0 1 0 0 2 2 0 0 1 2 0 0 13 2 1416.7474 J3KSR8;J3KTL2;Q07955 J3KSR8 87 99 SRSF1 Serine/arginine-rich splicing factor 1 yes no 3 0.021998 58.674 By matching By MS/MS 1 1 12249000 5782900 6466000 3747 1020 4032 8475;8476 7056 7056 1358 0 VKYRLTNEVELR QQKVKLQKVKYRLTNE LTNEVELRDKRINQFE K V K L R D 0 2 1 0 0 0 2 0 0 0 2 1 0 0 0 0 1 0 1 2 0 0 12 2 1518.8518 D6RFH8;Q5VVM6 D6RFH8 213 224 CCDC30 Coiled-coil domain-containing protein 30 yes no 2 0.017643 44.309 By MS/MS 1 0 0 0 3748 536 4033 8477 7057 7057 82 1 VLAETPDSFEK EVAESPLRVLAETPDS ETPDSFEKHIRSILQR R V L E K H 1 0 0 1 0 0 2 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 11 0 1234.6081 J3KMX1;Q99567 J3KMX1 460 470 NUP88 Nuclear pore complex protein Nup88 yes no 2 0.01648 70.685 By MS/MS By matching 1 1 1642000 792930 849060 3749 994 4034 8478;8479 7058 7058 3557 1 VLDANDNAPVFNQSLYR ASLPIHIKVLDANDNA VFNQSLYRARVLEDAP K V L Y R A 2 1 3 2 0 1 0 0 0 0 2 0 0 1 1 1 0 0 1 2 0 0 17 0 1934.9486 Q9UN70;A0A087X1P2 Q9UN70 234 250 PCDHGC3 Protocadherin gamma-C3 yes no 3 0.0075745 51.03 By matching By MS/MS 1 1 1924600 1043800 880810 3750 2128 4035 8480;8481 7059 7059 323;324;461 1 VLDDVSIRSPETK NKLYPKDRVLDDVSIR SIRSPETKCPKQNSIE R V L T K C 0 1 0 2 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 2 0 0 13 1 1457.7726 F5GXF5;E7ETD6;Q12830 F5GXF5 1229 1241 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.00093928 82.483 By MS/MS By MS/MS 1 1 3329500 1802700 1526800 3751 590 4036 8482;8483 7060;7061 7061 789;790 2 VLDLDHNEISGTIEDTSGAFSGLDSLSK FKGLRSLRVLDLDHNE SGLDSLSKLTLFGNKI R V L S K L 1 0 1 4 0 0 2 3 1 2 4 1 0 1 0 5 2 0 0 1 0 0 28 0 2919.3985 Q96JA1 Q96JA1 359 386 LRIG1 Leucine-rich repeats and immunoglobulin-like domains protein 1 yes yes 3 0.0088847 40.142 By MS/MS 1 1452200 1452200 0 3752 1899 4037 8484 7062 7062 2680;2681;3884;3885 1 VLDSSYGITK SEKELNFRVLDSSYGI DSSYGITKSLENIYSE R V L T K S 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 2 1 0 1 1 0 0 10 0 1081.5655 Q68D51 Q68D51 180 189 DENND2C DENN domain-containing protein 2C yes yes 2 0.00193 89.886 By matching By MS/MS 1 1 1603000 808580 794440 3753 1663 4038 8485;8486 7063 7063 2324 1 VLDTSSLTQSAPASPTNK TVNARPQRVLDTSSLT APASPTNKGVHIHQAG R V L N K G 2 0 1 1 0 1 0 0 0 0 2 1 0 0 2 4 3 0 0 1 0 0 18 0 1815.9214 Q8N122;I3L436 Q8N122 850 867 RPTOR Regulatory-associated protein of mTOR yes no 2 0.021465 54.811 By MS/MS By matching 1 1 26563000 12248000 14314000 3754 1770 4039 8487;8488 7064 7064 2489;3853 1 VLEDDPEAAYTTR VSDFGMSRVLEDDPEA PEAAYTTRGGKIPIRW R V L T R G 2 1 0 2 0 0 2 0 0 0 1 0 0 0 1 0 2 0 1 1 0 0 13 0 1478.6889 C9JXA2;P29320;F8W9W0;F8VP57;B7ZKW7;B7ZKJ3;P54756;E9PG71;P54764 E9PG71 770 782 EPHA3;EPHA5;EPHA4 Receptor protein-tyrosine kinase;Ephrin type-A receptor 3;Ephrin type-A receptor 5;Ephrin type-A receptor 4 no no 2 5.9309E-10 120.06 By matching By MS/MS 1 1 26724000 12413000 14311000 3755 631;487 4040 8489;8490 7065 7065 4116 1 VLEDEEGSKDIELSDDPYDCIR NTRIPRVRVLEDEEGS DDPYDCIRLSVENVPC R V L I R L 0 1 0 5 1 0 4 1 0 2 2 1 0 0 1 2 0 0 1 1 0 0 22 1 2596.1487 Q15024 Q15024 170 191 EXOSC7 Exosome complex component RRP42 yes yes 3 0.00080351 79.293 By matching By MS/MS 1 1 6587900 2532800 4055100 3756 1535 4041 8491;8492 7066 7066 2116 1 VLGAFSDGLAHLDNLK KVKAHGKKVLGAFSDG LAHLDNLKGTFATLS_ K V L L K G 2 0 1 2 0 0 0 2 1 0 4 1 0 1 0 1 0 0 0 1 0 0 16 0 1668.8835 F8W6P5;E9PEW8;E9PFT6;P68871;P02042 F8W6P5 68 83 HBB;HBD Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta yes no 3 0.0067256 55.173 By MS/MS By matching 1 1 870950 424300 446650 + 3757 618 4042 8493;8494 7067 7067 1 VLGIQVDTDGSGR GIRSSYIRVLGIQVDT VDTDGSGRSFAGAVSP R V L G R S 0 1 0 2 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 2 0 0 13 0 1315.6732 B1AHB1;P33992 B1AHB1 253 265 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 2 0.0098184 62.303 By MS/MS 1 365120 365120 0 3758 353 4043 8495 7068 7068 1 VLISVGSYK LEECPIPKVLISVGSY LISVGSYKSSVESVLI K V L Y K S 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 2 0 0 1 2 0 0 9 0 964.55933 Q8TEV9 Q8TEV9 411 419 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein yes yes 2 0.0094389 82.417 By MS/MS By MS/MS 1 1 1591700 788450 803280 3759 1827 4044 8496;8497 7069;7070 7070 2574 2 VLKEPVNLEGDDTSLIHGK SVTYKRGRVLKEPVNL DTSLIHGKIPSEMPSP R V L G K I 0 0 1 2 0 0 2 2 1 1 3 2 0 0 1 1 1 0 0 2 0 0 19 1 2063.0899 Q9H2J7 Q9H2J7 662 680 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 3 0.009004 76.049 By MS/MS By matching 1 1 4338900 2379800 1959100 3760 1998 4045 8498;8499 7071 7071 3923 1 VLLQASQDENFGNTTPR RKQSAQKRVLLQASQD NFGNTTPRNQVIPRTP R V L P R N 1 1 2 1 0 2 1 1 0 0 2 0 0 1 1 1 2 0 0 1 0 0 17 0 1888.9279 G3V1T4;P57740 G3V1T4 32 48 NUP107 Nuclear pore complex protein Nup107 yes no 2 0.0097587 53.528 By MS/MS By matching 1 1 5467600 2284800 3182700 3761 784 4046 8500;8501 7072 7072 1042 1 VLLSDSNLHDA PAFKPGEKVLLSDSNL SDSNLHDA________ K V L D A - 1 0 1 2 0 0 0 0 1 0 3 0 0 0 0 2 0 0 0 1 0 0 11 0 1182.5881 H3BV90;Q6FI81 H3BV90 236 246 CIAPIN1 Anamorsin yes no 2 0.015258 58.674 By matching By MS/MS 1 1 1192700 616990 575740 3762 938 4047 8502;8503 7073 7073 1263 1 VLNEECDQNWYK FKRGDILKVLNEECDQ ECDQNWYKAELNGKDG K V L Y K A 0 0 2 1 1 1 2 0 0 0 1 1 0 0 0 0 0 1 1 1 0 0 12 0 1596.6879 P62993;J3KT38;J3QRL5 P62993 27 38 GRB2 Growth factor receptor-bound protein 2 yes no 2 0.0047803 72.643 By matching By MS/MS 1 1 1483400 869400 614010 3763 1436 4048 8504;8505 7074 7074 1 VLPITVPKSPAFALK VVGVPEKKVLPITVPK KSPAFALKNRIRMPTK K V L L K N 2 0 0 0 0 0 0 0 0 1 2 2 0 1 3 1 1 0 0 2 0 0 15 1 1579.9702 Q9ULW0 Q9ULW0 478 492 TPX2 Targeting protein for Xklp2 yes yes 3 0.0051564 56.121 By matching By MS/MS 1 1 1091800 454050 637730 3764 2123 4049 8506;8507 7075 7075 3046 1 VLSPGVSHR TQILRPPKVLSPGVSH LSPGVSHRLRDQELIL K V L H R L 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 2 0 0 0 2 0 0 9 0 950.52976 Q14676;A2AB07;A2AB05 Q14676 106 114 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2 0.021695 63.694 By MS/MS 1 0 0 0 3765 1523 4050 8508 7076 7076 2095 1 VLSPLIIK PKRLPDGRVLSPLIIK VLSPLIIKSTPRNLNR R V L I K S 0 0 0 0 0 0 0 0 0 2 2 1 0 0 1 1 0 0 0 1 0 0 8 0 881.59499 Q8NCN4 Q8NCN4 401 408 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 2 0.020964 74.376 By MS/MS By matching 1 1 587220 298060 289160 3766 1793 4051 8509;8510 7077 7077 2518 1 VLSPPHIK SSSATKQKVLSPPHIK VLSPPHIKADFNLADF K V L I K A 0 0 0 0 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 1 0 0 8 0 889.53854 A0A0D9SG79;Q9NZ09 A0A0D9SG79 170 177 UBAP1 Ubiquitin-associated protein 1 yes no 2 0.0076013 112.11 By MS/MS By MS/MS 1 1 3421200 1452900 1968200 3767 238 4052 8511;8512 7078;7079 7078 345 2 VLSPPKLNEVSSDANR FGQNMSERVLSPPKLN EVSSDANRENAAAESG R V L N R E 1 1 2 1 0 0 1 0 0 0 2 1 0 0 2 3 0 0 0 2 0 0 16 1 1724.9057 B7Z7F3;Q9H6Z4;K7ESQ0 B7Z7F3 258 273 RANBP3 Ran-binding protein 3 yes no 3 0.00057581 76.573 By MS/MS 1 2286200 0 2286200 3768 408 4053 8513 7080;7081 7081 570 2 VLSPTAAKPSPFEGK IKIKKKKKVLSPTAAK KPSPFEGKTSTEPSTA K V L G K T 2 0 0 0 0 0 1 1 0 0 1 2 0 1 3 2 1 0 0 1 0 0 15 1 1527.8297 Q96QC0 Q96QC0 311 325 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 2 0.014705 59.673 By matching By MS/MS 1 1 26190000 11853000 14337000 3769 1923 4054 8514;8515 7082 7082 2718 1 VLTAKASTDL TCNSARIRVLTAKAST TAKASTDL________ R V L D L - 2 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 2 0 0 1 0 0 10 1 1017.5706 A0A087WZF1;Q93052 A0A087WZF1 581 590 LPP Lipoma-preferred partner yes no 2 0.0053785 99.343 By MS/MS By MS/MS 1 1 2445400 998590 1446800 3770 90 4055 8516;8517 7083;7084 7083 110;3238 2 VLTANSNPSSPSAAK KRSRVTDKVLTANSNP PSSPSAAKRRRT____ K V L A K R 3 0 2 0 0 0 0 0 0 0 1 1 0 0 2 4 1 0 0 1 0 0 15 0 1442.7365 Q9NV56 Q9NV56 186 200 MRGBP MRG/MORF4L-binding protein yes yes 2 0.0093479 55.721 By MS/MS By matching 1 1 8546500 4339800 4206700 3771 2057 4056 8518;8519 7085 7085 2941;2942 1 VLTIVAENPSWTK KVKMMVVRVLTIVAEN AENPSWTKDILCATLS R V L T K D 1 0 1 0 0 0 1 0 0 1 1 1 0 0 1 1 2 1 0 2 0 0 13 0 1456.7926 F5H7B7;A0A0A0MT16;Q86UQ4 F5H7B7 247 259 ABCA13 ATP-binding cassette sub-family A member 13 yes no 3 0.020509 52.247 By MS/MS 1 0 0 0 3772 170 4057 8520 7086 7086 27 3272 1 VLTLSDDLER DEISDHAKVLTLSDDL TLSDDLERTIEERVNI K V L E R T 0 1 0 2 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 1 0 0 10 0 1159.6085 P55010 P55010 225 234 EIF5 Eukaryotic translation initiation factor 5 yes yes 2 0.0087561 66.56 By MS/MS By MS/MS 1 1 1513500 638790 874750 3773 1411 4058 8521;8522 7087;7088 7087 1903 2 VLTPELYAELR AHNNHMAKVLTPELYA PELYAELRAKSTPSGF K V L L R A 1 1 0 0 0 0 2 0 0 0 3 0 0 0 1 0 1 0 1 1 0 0 11 0 1302.7184 G3V4N7;P12277;G3V461 G3V4N7 33 43 CKB Creatine kinase B-type yes no 2 0.012304 75.695 By matching By MS/MS 1 1 5118600 2174600 2944000 3774 798 4059 8523;8524 7089 7089 3497 1 VLVVVTDGR GMRKNVPKVLVVVTDG LVVVTDGRSQDEVKKA K V L G R S 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 4 0 0 9 0 956.56548 D6RGG3;Q99715;A0A087X0A8;H0Y5N9 D6RGG3 2428 2436 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0027852 103.74 By MS/MS By MS/MS 1 1 1047400 665970 381440 3775 538 4060 8525;8526 7090;7091 7091 2 VLYYMEK SQQDDSMRVLYYMEKE RVLYYMEKELANFDPS R V L E K E 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 2 1 0 0 7 0 944.46774 S4R3V8;Q86X29 S4R3V8 356 362 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.010775 94.662 By MS/MS By MS/MS 1 1 5392200 2304600 3087600 3776 1738 4061 8527;8528 7092;7093;7094 7093 4387 3 VMDSDEDDDY TVKFNRRKVMDSDEDD DSDEDDDY________ K V M D Y - 0 0 0 5 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 1 0 0 10 0 1202.3921 K7EQA1;O14737 K7EQA1 78 87 PDCD5 Programmed cell death protein 5 yes no 2 0.01319 61.161 By MS/MS 1 0 0 0 3777 1051 4062 8529 7095 7095 120 1388;4218 1 VMEGTVAAQDEFYR CTRLIKPKVMEGTVAA AAQDEFYRSGWALNMK K V M Y R S 2 1 0 1 0 1 2 1 0 0 0 0 1 1 0 0 1 0 1 2 0 0 14 0 1614.7348 P41240 P41240 172 185 CSK Tyrosine-protein kinase CSK yes yes 2 0.012527 48.741 By matching By MS/MS 1 2 5366200 1640100 3726000 3778 1353 4063;4064 8530;8531;8532 7096;7097 7097 177 4291 2 VMENSSGTPDILTR PTAAPGQKVMENSSGT GTPDILTRHFTIDDFE K V M T R H 0 1 1 1 0 0 1 1 0 1 1 0 1 0 1 2 2 0 0 1 0 0 14 0 1518.7348 J3KRJ2;J3KRF8;J3QR41;J3KTD6;J3QLN8;Q96GD4 J3KRJ2 16 29 AURKB Aurora kinase B yes no 2 0.016861 53.136 By matching By MS/MS 1 1 761920 371640 390280 3779 1013 4065 8533;8534 7098 7098 1349 1 VMEQLADVTLRR LNLDEVFKVMEQLADV LADVTLRRLLDNEVFD K V M R R L 1 2 0 1 0 1 1 0 0 0 2 0 1 0 0 0 1 0 0 2 0 0 12 1 1429.7711 J3KQ40;O95759 J3KQ40 258 269 TBC1D8 TBC1 domain family member 8 yes no 2 0.016511 47.823 By matching By MS/MS 1 1 1591900 872010 719910 3780 1006 4066 8535;8536 7099 7099 3561 0 VMLGETNPADSKPGTIR LNVVKTGRVMLGETNP DSKPGTIRGDFCIQVG R V M I R G 1 1 1 1 0 0 1 2 0 1 1 1 1 0 2 1 2 0 0 1 0 0 17 1 1784.9091 P15531;E7ERL0;J3KPD9;Q32Q12;O60361;P22392 P15531 89 105 NME1;NME2;NME1-NME2;NME2P1 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 3 0.01259 54.281 By matching By MS/MS 1 1 2145900 947050 1198900 3781 1275 4067 8537;8538 7100 7100 164 3658 1 VMTIPYQPMPASSPVICAGGQDR LSQSPQGRVMTIPYQP ICAGGQDRCSDAAGYP R V M D R C 2 1 0 1 1 2 0 2 0 2 0 0 2 0 4 2 1 0 1 2 0 0 23 0 2474.1756 Q15365 Q15365 178 200 PCBP1 Poly(rC)-binding protein 1 yes yes 3 5.548E-08 99.064 By MS/MS By MS/MS 3 3 30080000 11915000 18165000 3782 1552 4068;4069;4070 8539;8540;8541;8542;8543;8544 7101;7102;7103;7104 7101 222;223 2145;2146 4 VMVYSALR CRRQEDSRVMVYSALR VMVYSALRIPPED___ R V M L R I 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 2 0 0 8 0 937.50552 Q96BI3 Q96BI3 253 260 APH1A Gamma-secretase subunit APH-1A yes yes 2 0.018095 54.611 By matching By MS/MS 1 1 1306600 586620 719940 3783 1876 4071 8545;8546 7105 7105 4414 1 VNDAEPGSPEAPQGK RRPRRRRRVNDAEPGS SPEAPQGKRRKADGED R V N G K R 2 0 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 15 0 1494.6951 Q8N8A6 Q8N8A6 76 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 2 0.0038209 62.338 By MS/MS By MS/MS 1 1 11233000 5649700 5583700 3784 1784 4072 8547;8548 7106;7107;7108 7107 2507 3 VNDDFYTKRR LKSPKADKVNDDFYTK DDFYTKRRHLAELAAK K V N R R H 0 2 1 2 0 0 0 0 0 0 0 1 0 1 0 0 1 0 1 1 0 0 10 2 1312.6524 B4DS77 B4DS77 302 311 SHISA9 Protein shisa-9 yes yes 2 0.0184 41.427 By MS/MS 1 0 0 0 3785 378 4073 8549 7109 7109 62 3342;4091 1 VNFCPLPSEQCYQAPGGPEDR AALQPHPRVNFCPLPS APGGPEDRGPAWVGSH R V N D R G 1 1 1 1 2 2 2 2 0 0 1 0 0 1 4 1 0 0 1 1 0 0 21 0 2420.0525 Q15654 Q15654 44 64 TRIP6 Thyroid receptor-interacting protein 6 yes yes 3 0.0071151 44.238 By matching By MS/MS 1 1 2593800 1384800 1209000 3786 1563 4074 8550;8551 7110 7110 4361 1 VNFSEEGETEEDDQDSSHSSVTTVK EATSVQQKVNFSEEGE HSSVTTVKARSRDSDE K V N V K A 0 0 1 3 0 1 5 1 1 0 0 1 0 1 0 5 3 0 0 3 0 0 25 0 2755.158 A0A0A0MSK5;J3KN66;Q5JTV8;H0YD16 A0A0A0MSK5 91 115 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.0029475 56.461 By MS/MS By matching 2 2 29057000 16530000 12527000 3787 164 4075 8552;8553;8554;8555 7111;7112 7112 227;3270 2 VNGDDHHEEDMDMSD GDSLRESKVNGDDHHE EEDMDMSD________ K V N S D - 0 0 1 5 0 0 2 1 2 0 0 0 2 0 0 1 0 0 0 1 0 0 15 0 1744.5941 Q5T757;Q05519 Q5T757 410 424 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 1.1206E-05 78.505 By MS/MS 1 0 0 0 3788 1464 4076 8556 7113 7113 207 1968 1 VNGKVLNLSSTSPEK GLSNSVVKVNGKVLNL LSSTSPEKKETIKLFL K V N E K K 0 0 2 0 0 0 1 1 0 0 2 2 0 0 1 3 1 0 0 2 0 0 15 1 1571.8519 Q5VYS4 Q5VYS4 217 231 MEDAG Mesenteric estrogen-dependent adipogenesis protein yes yes 2 0.020041 43.628 By MS/MS 1 0 0 0 3789 1656 4077 8557 7114 7114 223;224 2313;3814 1 VNLEESSGVENSPAGARPK VLDFHLNRVNLEESSG SPAGARPKRKNKKSYD R V N P K R 2 1 2 0 0 0 3 2 0 0 1 1 0 0 2 3 0 0 0 2 0 0 19 1 1939.9599 Q8WVM8 Q8WVM8 292 310 SCFD1 Sec1 family domain-containing protein 1 yes yes 3 0.0085832 48.907 By MS/MS By MS/MS 1 1 13049000 7340200 5708800 3790 1837 4078 8558;8559 7115;7116 7115 2584 2 VNLTRDVDET SEITDEVKVNLTRDVD LTRDVDET________ K V N E T - 0 1 1 2 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 2 0 0 10 1 1160.5673 Q8IYR0 Q8IYR0 613 622 C6orf165 UPF0704 protein C6orf165 yes yes 2 0.020683 42.109 By MS/MS 1 0 0 0 3791 1764 4079 8560 7117 7117 247 3850 1 VNQIGSVTESLQACK SCNCLLLKVNQIGSVT TESLQACKLAQANGWG K V N C K L 1 0 1 0 1 2 1 1 0 1 1 1 0 0 0 2 1 0 0 2 0 0 15 0 1632.8141 P06733 P06733 344 358 ENO1 Alpha-enolase yes yes 2 0.0037365 66.326 By MS/MS 1 1216600 0 1216600 3792 1227 4080 8561 7118 7118 1 VNQLEEKTK LLEESRDKVNQLEEKT NQLEEKTKLQSENLKQ K V N T K L 0 0 1 0 0 1 2 0 0 0 1 2 0 0 0 0 1 0 0 1 0 0 9 1 1087.5873 Q5VXJ5;A0A087WZC3;Q15431 Q5VXJ5 296 304 SYCP1 Synaptonemal complex protein 1 yes no 2 0.02166 47.844 By MS/MS 1 0 0 0 3793 89 4081 8562 7119 7119 3237 1 VNSGDTEVGSSLLR VKAIPRRRVNSGDTEV EVGSSLLRHPSPELSR R V N L R H 0 1 1 1 0 0 1 2 0 0 2 0 0 0 0 3 1 0 0 2 0 0 14 0 1432.7158 O75592 O75592 3465 3478 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 0.00080223 85.163 By MS/MS By MS/MS 1 1 6238600 2632200 3606400 3794 1167 4082 8563;8564 7120;7121 7121 1558;3630 2 VNYSRGLGPR DLQGSLDRVNYSRGLG YSRGLGPRVRLFVFPD R V N P R V 0 2 1 0 0 0 0 2 0 0 1 0 0 0 1 1 0 0 1 1 0 0 10 1 1117.5992 Q96M42 Q96M42 95 104 LINC00479 Putative uncharacterized protein encoded by LINC00479 yes yes 2 0.020883 46.39 By MS/MS 1 0 0 0 3795 1909 4083 8565 7122 7122 265 1 VPDSPENELK QALEKLEKVPDSPENE DSPENELKSRWENLLG K V P L K S 0 0 1 1 0 0 2 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 10 0 1126.5506 Q8NI35;A0A0U1RR46;A0A0X1KG69;A0A087WUZ6 Q8NI35 519 528 INADL InaD-like protein yes no 2 0.0076933 67.897 By MS/MS By matching 1 1 1872000 844870 1027200 3796 1810 4084 8566;8567 7123 7123 2552 1 VPGEQGSDEEHCKEHR LQPELQPKVPGEQGSD EEHCKEHRAQALRALL K V P H R A 0 1 0 1 1 1 4 2 2 0 0 1 0 0 1 1 0 0 0 1 0 0 16 1 1892.8071 Q9UNS1 Q9UNS1 1115 1130 TIMELESS Protein timeless homolog yes yes 3 0.010576 49.595 By matching By MS/MS 1 1 5318400 1994100 3324300 3797 2129 4085 8568;8569 7124 7124 3056 1 VPKPEPIPEPKEPSPEK TSTSDILKVPKPEPIP PKEPSPEKNSKKEKEK K V P E K N 0 0 0 0 0 0 4 0 0 1 0 3 0 0 7 1 0 0 0 1 0 0 17 2 1897.0197 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 247 263 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.0024217 77.222 By matching By MS/MS 1 1 4374700 1923700 2451100 3798 346 4086 8570;8571 7125 7125 517 1 VPKSPEHSAEPIR KAEGKVERVPKSPEHS EHSAEPIRTFIKAKEY R V P I R T 1 1 0 0 0 0 2 0 1 1 0 1 0 0 3 2 0 0 0 1 0 0 13 1 1445.7627 Q9ULH0 Q9ULH0 1552 1564 KIDINS220 Kinase D-interacting substrate of 220 kDa yes yes 3 0.0032371 66.674 By MS/MS By MS/MS 1 1 5791000 2793400 2997600 3799 2118 4087 8572;8573 7126;7127 7126 3031 2 VPPAPVPCPPPSPGPSAVPSSPK PSEKVEVKVPPAPVPC SAVPSSPKSVATEERA K V P P K S 2 0 0 0 1 0 0 1 0 0 0 1 0 0 11 4 0 0 0 3 0 0 23 0 2218.1456 O95817 O95817 366 388 BAG3 BAG family molecular chaperone regulator 3 yes yes 3 0.0038817 49.528 By MS/MS 1 2125700 0 2125700 3800 1199 4088 8574 7128;7129;7130 7129 1603;1604;1605 3 VPSAPGQESPIPDPK PPEMVGQRVPSAPGQE ESPIPDPKLMPHMKNE R V P P K L 1 0 0 1 0 1 1 1 0 1 0 1 0 0 5 2 0 0 0 1 0 0 15 0 1517.7726 E9PGC8;P78559 E9PGC8 2048 2062 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.0017345 70.412 By MS/MS By matching 1 1 1692300 869940 822370 3801 633 4089 8575;8576 7131 7131 856 1 VPSPLEGSEGDGDTD QRCARTDKVPSPLEGS SEGDGDTD________ K V P T D - 0 0 0 3 0 0 2 3 0 0 1 0 0 0 2 2 1 0 0 1 0 0 15 0 1473.6107 F5H168;Q9Y606;F5H1S9 F5H168 120 134 PUS1 tRNA pseudouridine synthase A, mitochondrial;tRNA pseudouridine synthase yes no 2 0.0084572 65.895 By MS/MS By matching 1 1 6347900 3090600 3257300 3802 710 4090 8577;8578 7132 7132 3470 1 VPSTPPPK SGEERAAKVPSTPPPK VPSTPPPKAAPPPPAL K V P P K A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 1 1 0 0 1 0 0 8 0 821.4647 Q9H7N4 Q9H7N4 973 980 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.0085189 94.309 By MS/MS By matching 1 1 4958700 1955200 3003500 3803 2017 4091 8579;8580 7133 7133 2886 1 VPSVESLFR FAQKLQLRVPSVESLF PSVESLFRSPIKESLF R V P F R S 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 2 0 0 0 2 0 0 9 0 1032.5604 E7EVX2;Q86W71;Q13439 E7EVX2 91 99 GOLGA4 Golgin subfamily A member 4 yes no 2 0.020969 61.344 By MS/MS By matching 1 1 9480400 4377000 5103400 3804 598 4092 8581;8582 7134 7134 822 1 VPTAIHQLYLDSNK ILRKMPPRVPTAIHQL QLYLDSNKIETIPNGY R V P N K I 1 0 1 1 0 1 0 0 1 1 2 1 0 0 1 1 1 0 1 1 0 0 14 0 1597.8464 P51888 P51888 240 253 PRELP Prolargin yes yes 3 0.0027286 68.83 By MS/MS By matching 1 1 1100600 680570 420010 3805 1398 4093 8583;8584 7135 7135 1 VPVDPATYGQFYGGDSYIILYNYR WRIEGSDKVPVDPATY YIILYNYRHGGRQGQI K V P Y R H 1 1 1 2 0 1 0 3 0 2 1 0 0 1 2 1 1 0 5 2 0 0 24 0 2770.3279 CON__Q3SX14;A0A0A0MS51;A0A0A0MT01;P06396 CON__Q3SX14 457 480 GSN Gelsolin yes no 3 2.7908E-30 117.35 By MS/MS By MS/MS 1 1 21541000 10420000 11121000 + 3806 510 4094 8585;8586 7136;7137;7138 7136 3 VPVLISPTLK LPTTHNHKVPVLISPT VLISPTLKHTPADVQL K V P L K H 0 0 0 0 0 0 0 0 0 1 2 1 0 0 2 1 1 0 0 2 0 0 10 0 1065.6798 P42684 P42684 931 940 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0020211 91.313 By MS/MS By MS/MS 2 1 7108900 4019600 3089300 3807 1358 4095 8587;8588;8589 7139;7140;7141 7141 1781 3 VPVNLLNSPDCDVK KQSCPFGRVPVNLLNS NSPDCDVKTDDSVVPC R V P V K T 0 0 2 2 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 3 0 0 14 0 1568.7868 P33981 P33981 274 287 TTK Dual specificity protein kinase TTK yes yes 2 0.020707 51.276 By matching By MS/MS 1 1 3297900 1195900 2102100 3808 1336 4096 8590;8591 7142 7142 1755 1 VPVPESPAFSR RPSTRFLKVPVPESPA PESPAFSRHADPAHQL K V P S R H 1 1 0 0 0 0 1 0 0 0 0 0 0 1 3 2 0 0 0 2 0 0 11 0 1184.619 A4D1S0 A4D1S0 153 163 KLRG2 Killer cell lectin-like receptor subfamily G member 2 yes yes 2 0.0020266 86.67 By MS/MS By MS/MS 1 1 1215100 443220 771900 3809 323 4097 8592;8593 7143;7144 7144 463 2 VQAGPGSPR GRGAAVSRVQAGPGSP QAGPGSPRRARGRQQV R V Q P R R 1 1 0 0 0 1 0 2 0 0 0 0 0 0 2 1 0 0 0 1 0 0 9 0 867.45626 I3L4F6;I3L0U5;Q6PK04 I3L4F6 12 20 CCDC137 Coiled-coil domain-containing protein 137 yes no 2 0.002053 83.081 By MS/MS By MS/MS 1 1 0 0 0 3810 980 4098 8594;8595 7145;7146 7145 1317 2 VQAYEEPSVASSPNGK LTQDWESRVQAYEEPS VASSPNGKESDLRRSE R V Q G K E 2 0 1 0 0 1 2 1 0 0 0 1 0 0 2 3 0 0 1 2 0 0 16 0 1661.7897 Q99575 Q99575 719 734 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 2;3 3.4451E-137 185.86 By MS/MS By MS/MS 4 4 39988000 18566000 21422000 3811 1940 4099;4100 8596;8597;8598;8599;8600;8601;8602;8603 7147;7148;7149;7150;7151;7152 7151 276 2747;2748 6 VQAYEEPSVASSPNGKESDLR LTQDWESRVQAYEEPS NGKESDLRRSEVPCAP R V Q L R R 2 1 1 1 0 1 3 1 0 0 1 1 0 0 2 4 0 0 1 2 0 0 21 1 2262.0764 Q99575 Q99575 719 739 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 3 0.00049109 91.481 By MS/MS By MS/MS 2 2 25057000 11183000 13874000 3812 1940 4101;4102 8604;8605;8606;8607 7153;7154 7153 276 2747;2748 2 VQEHEDSGDSEVENEAK LRRLRGPRVQEHEDSG SEVENEAKGNFPPQKK R V Q A K G 1 0 1 2 0 1 5 1 1 0 0 1 0 0 0 2 0 0 0 2 0 0 17 0 1900.7923 Q9Y5J1 Q9Y5J1 115 131 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 2;3 0.00087147 88.163 By MS/MS By MS/MS 2 2 15603000 7958100 7644900 3813 2167 4103 8608;8609;8610;8611 7155;7156;7157 7155 3148 3 VQEKPDSPGGSTQIQR SKPCGSPRVQEKPDSP GGSTQIQRYLDAERLA R V Q Q R Y 0 1 0 1 0 3 1 2 0 1 0 1 0 0 2 2 1 0 0 1 0 0 16 1 1725.8646 M0R300;M0R0P8;Q13459 M0R300 1284 1299 MYO9B Unconventional myosin-IXb yes no 2 0.0024138 78.244 By MS/MS By MS/MS 1 1 6551000 3283100 3267800 3814 1072 4104 8612;8613 7158;7159 7158 1413 2 VQFNLGNSSR HNQPIPWKVQFNLGNS FNLGNSSRPSNQCRNS K V Q S R P 0 1 2 0 0 1 0 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 10 0 1120.5625 Q9H741 Q9H741 61 70 C12orf49 UPF0454 protein C12orf49 yes yes 2 0.021958 40.882 By MS/MS 1 0 0 0 3815 2014 4105 8614 7160 7160 294 2880 1 VQGFQVEYK EQLDYLSRVQGFQVEY QGFQVEYKDFPKNNKN R V Q Y K D 0 0 0 0 0 2 1 1 0 0 0 1 0 1 0 0 0 0 1 2 0 0 9 0 1096.5553 A0A087X1A5;Q5JW30;O95793 A0A087X1A5 415 423 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 2 0.019125 43.246 By MS/MS By matching 1 1 1265800 702260 563540 3816 106 4106 8615;8616 7161 7161 4020 0 VQGSPLKK LSSQERMKVQGSPLKK VQGSPLKKLFTSTGLK K V Q K K L 0 0 0 0 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 8 1 855.5178 Q02952 Q02952 511 518 AKAP12 A-kinase anchor protein 12 yes yes 2 0.014601 125.16 By matching By MS/MS 1 1 5257700 2641300 2616400 3817 1457 4107 8617;8618 7162 7162 1953 1 VQHSKNSSGKR NAGPSWNKVQHSKNSS SKNSSGKRQSKSQVPH K V Q K R Q 0 1 1 0 0 1 0 1 1 0 0 2 0 0 0 3 0 0 0 1 0 0 11 2 1226.648 A2A2M7;Q9NTX9 A2A2M7 10 20 FAM217B Protein FAM217B yes no 2 0.020217 46.462 By MS/MS 1 0 0 0 3818 314 4108 8619 7163 7163 450;451 1 VQMNFLHLLSSEATHIITIHCLNTPR KLEFGVGKVQMNFLHL IHCLNTPRWTSTQTSG K V Q P R W 1 1 2 0 1 1 1 0 3 3 4 0 1 1 1 2 3 0 0 1 0 0 26 0 3044.5688 Q17RW2 Q17RW2 1602 1627 COL24A1 Collagen alpha-1(XXIV) chain yes yes 3 0.0099133 41.76 By MS/MS By matching 1 1 4283600 2186200 2097400 3819 1577 4109 8620;8621 7164 7164 2180;2181;3774;3775 1 VQMTSPSSTGSPMFK SSQALTNKVQMTSPSS STGSPMFKFSSPIVKS K V Q F K F 0 0 0 0 0 1 0 1 0 0 0 1 2 1 2 4 2 0 0 1 0 0 15 0 1583.7324 P49790 P49790 512 526 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.00025662 86.548 By MS/MS By MS/MS 2 3 12337000 4282200 8055100 3820 1383 4110;4111 8622;8623;8624;8625;8626 7165;7166;7167;7168 7166 182 1858;1859;1860;3704 4 VQRPHSSPPR SDSSSPQRVQRPHSSP RPHSSPPRFVTVEELL R V Q P R F 0 2 0 0 0 1 0 0 1 0 0 0 0 0 3 2 0 0 0 1 0 0 10 1 1159.621 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3 R4GNF5 50 59 TCP11L1 T-complex protein 11-like protein 1 yes no 3 0.021163 43.77 By MS/MS By matching 1 1 7266600 3011500 4255100 3821 645 4112 8627;8628 7169 7169 873 0 VQRPKEESSEDENEVSNILR GANSVDSRVQRPKEES NEVSNILRSGRSKQFY R V Q L R S 0 2 2 1 0 1 5 0 0 1 1 1 0 0 1 3 0 0 0 2 0 0 20 2 2357.1459 Q01804 Q01804 1016 1035 OTUD4 OTU domain-containing protein 4 yes yes 3 0.018799 51.348 By matching By MS/MS 1 1 9746300 5326000 4420300 3822 1452 4113 8629;8630 7170 7170 1936;1937 1 VQSPEPPAPER RRHQERLRVQSPEPPA PEPPAPERALSPAELR R V Q E R A 1 1 0 0 0 1 2 0 0 0 0 0 0 0 4 1 0 0 0 1 0 0 11 0 1205.6041 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1392 1402 SCRIB Protein scribble homolog yes no 2 0.001818 92.295 By MS/MS By MS/MS 1 1 4443000 2411600 2031400 3823 245 4114 8631;8632 7171;7172 7172 358 2 VQTTPPPAVQGQK APVRQQPKVQTTPPPA PPAVQGQKVGSLTPPS K V Q Q K V 1 0 0 0 0 3 0 1 0 0 0 1 0 0 3 0 2 0 0 2 0 0 13 0 1349.7303 E9PG46;Q2M2I8 E9PG46 603 615 AAK1 AP2-associated protein kinase 1 yes no 2 0.012656 69.229 By MS/MS By matching 1 1 10193000 4910100 5283000 3824 630 4115 8633;8634 7173 7173 3434 1 VQTTPSKPGGDR TPGKSSSKVQTTPSKP PSKPGGDRYIPHRSAA K V Q D R Y 0 1 0 1 0 1 0 2 0 0 0 1 0 0 2 1 2 0 0 1 0 0 12 1 1241.6364 Q12834 Q12834 67 78 CDC20 Cell division cycle protein 20 homolog yes yes 2 1.1481E-07 114.87 By MS/MS By MS/MS 1 1 4691600 2166400 2525100 3825 1478 4116 8635;8636 7174;7175 7174 3734 2 VQYLLLSR QEDEALRRVQYLLLSR VQYLLLSRPIDYSSRM R V Q S R P 0 1 0 0 0 1 0 0 0 0 3 0 0 0 0 1 0 0 1 1 0 0 8 0 990.58622 H0YFL5;E7ES84;P50748 H0YFL5 36 43 KNTC1 Kinetochore-associated protein 1 yes no 2 0.019077 51.854 By MS/MS 1 318850 0 318850 3826 580 4117 8637 7176 7176 776;4140 1 VRIMGPNYTPGK GLVSTGLKVRIMGPNY GPNYTPGKKEDLYLKP K V R G K K 0 1 1 0 0 0 0 2 0 1 0 1 1 0 2 0 1 0 1 1 0 0 12 1 1331.702 P13639 P13639 427 438 EEF2 Elongation factor 2 yes yes 2 0.016113 50.034 By MS/MS 1 0 0 0 3827 1269 4118 8638 7177 7177 176 3656;4269 1 VRQLEEENRMLPQASQNR YVRQLEARVRQLEEEN LPQASQNRRQPPTRNS R V R N R R 1 3 2 0 0 3 3 0 0 0 2 0 1 0 1 1 0 0 0 1 0 0 18 2 2197.1022 Q96PX6 Q96PX6 427 444 CCDC85A Coiled-coil domain-containing protein 85A yes yes 2 0.020591 45.257 By MS/MS 1 0 0 0 3828 1919 4119 8639 7178 7178 270;271 275 1 VRTANALNSTNFDEK DEDVQMERVRTANALN NSTNFDEKPVIIASCL R V R E K P 2 1 3 1 0 0 1 0 0 0 1 1 0 1 0 1 2 0 0 1 0 0 15 1 1678.8275 A0A0A0MSU4;O94911 A0A0A0MSU4 1258 1272 ABCA8 ATP-binding cassette sub-family A member 8 yes no 3 0.016949 44.457 By MS/MS 1 824160 0 824160 3829 167 4120 8640 7179 7179 26 231;3271 0 VRTDSNNENSVPK FSHRPKEKVRTDSNNE NNENSVPKDFENVDNS K V R P K D 0 1 3 1 0 0 1 0 0 0 0 1 0 0 1 2 1 0 0 2 0 0 13 1 1458.7063 Q86Y38 Q86Y38 146 158 XYLT1 Xylosyltransferase 1 yes yes 2 0.02032 42.336 By MS/MS 1 0 0 0 3830 1742 4121 8641 7180 7180 243;244 2450;3845 1 VRTEQIQMAVSCYLK ________________ MAVSCYLKRRQYVDSD R V R L K R 1 1 0 0 1 2 1 0 0 1 1 1 1 0 0 1 1 0 1 2 0 0 15 1 1824.9226 Q5TDI7;O75529 Q5TDI7 4 18 TAF5L TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L yes no 4 0.0035198 54.237 By MS/MS By MS/MS 2 2 7709300 3596900 4112400 3831 1165 4122 8642;8643;8644;8645 7181;7182 7182 3622 2 VRTRLAPGSR PSSTYVARVRTRLAPG TRLAPGSRLSGRPSKW R V R S R L 1 3 0 0 0 0 0 1 0 0 1 0 0 0 1 1 1 0 0 1 0 0 10 2 1111.6574 B0QY07;Q6NSJ8;P32927 B0QY07 132 141 CSF2RB Cytokine receptor common subunit beta yes no 3 0.021894 40.516 By MS/MS 1 0 0 0 3832 347 4123 8646 7183 7183 518 1 VSAGEPGSHPSPAPR CRRGKEPKVSAGEPGS SHPSPAPRRSPAGNKQ K V S P R R 2 1 0 0 0 0 1 2 1 0 0 0 0 0 4 3 0 0 0 1 0 0 15 0 1444.7059 A0A1B0GV68;C9JME2;Q9Y4F1 A0A1B0GV68 417 431 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 2 0.00041406 74.853 By matching By MS/MS 1 1 6922100 3546700 3375400 3833 297 4124 8647;8648 7184 7184 425 1 VSAQRLQEAGILSAEELQR SFDGLRRKVSAQRLQE LSAEELQRLAQGHTTV K V S Q R L 3 2 0 0 0 3 3 1 0 1 3 0 0 0 0 2 0 0 0 1 0 0 19 1 2097.1178 Q15149 Q15149 2790 2808 PLEC Plectin yes yes 2 0.022239 40.577 By MS/MS 1 0 0 0 3834 1546 4125 8649 7185 7185 2138;2139 1 VSDAVQPNNYLIR NTGVSKPRVSDAVQPN QPNNYLIRTEPEQGTL R V S I R T 1 1 2 1 0 1 0 0 0 1 1 0 0 0 1 1 0 0 1 2 0 0 13 0 1487.7732 A0A0D9SF60;H0YFB1;E7EST6;Q99569 Q99569 105 117 PKP4 Plakophilin-4 no no 2 0.011379 51.445 By matching By MS/MS 1 1 1545100 783550 761590 3835 232;1939 4126 8650;8651 7186 7186 4041 1 VSDQNSPVLPK AYMLFYQRVSDQNSPV QNSPVLPKKSRVSVVR R V S P K K 0 0 1 1 0 1 0 0 0 0 1 1 0 0 2 2 0 0 0 2 0 0 11 0 1182.6245 Q9UPU5 Q9UPU5 2042 2052 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 9.4476E-23 150.14 By MS/MS By MS/MS 1 1 46226000 21614000 24612000 3836 2132 4127 8652;8653 7187;7188 7188 3066 2 VSDQNSPVLPKK AYMLFYQRVSDQNSPV NSPVLPKKSRVSVVRQ R V S K K S 0 0 1 1 0 1 0 0 0 0 1 2 0 0 2 2 0 0 0 2 0 0 12 1 1310.7194 Q9UPU5 Q9UPU5 2042 2053 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 2.1982E-28 148.85 By MS/MS By MS/MS 1 1 4069800 2223100 1846600 3837 2132 4128 8654;8655 7189;7190 7189 3066 2 VSGAGFSPSSK FGIIGNDRVSGAGFSP AGFSPSSKMEGGHFVP R V S S K M 1 0 0 0 0 0 0 2 0 0 0 1 0 1 1 4 0 0 0 1 0 0 11 0 1022.5033 Q9C0C2 Q9C0C2 1132 1142 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0021109 86.262 By MS/MS By matching 1 1 3218400 1569900 1648500 3838 1985 4129 8656;8657 7191 7191 2831 1 VSGRTSPPLLDR VPLSAYERVSGRTSPP TSPPLLDRARSRTPPS R V S D R A 0 2 0 1 0 0 0 1 0 0 2 0 0 0 2 2 1 0 0 1 0 0 12 1 1296.715 Q9UQ35 Q9UQ35 2393 2404 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.0024366 85.287 By MS/MS By MS/MS 2 2 42166000 20302000 21864000 3839 2134 4130 8658;8659;8660;8661 7192;7193;7194 7193 3097;3971 3 VSLEEIYSGCTK PPVTHDLRVSLEEIYS EIYSGCTKKMKISHKR R V S T K K 0 0 0 0 1 0 2 1 0 1 1 1 0 0 0 2 1 0 1 1 0 0 12 0 1384.6544 M0R1D6;M0QZD0;M0QYT3;M0QXK0;M0R080;Q9UDY4;P25685 M0R1D6 70 81 DNAJB1;DNAJB4 DnaJ homolog subfamily B member 4;DnaJ homolog subfamily B member 1 yes no 2 3.2546E-15 102.06 By MS/MS 1 0 0 0 3840 1058 4131 8662 7195 7195 4219 1 VSLEPHQGPGTPESK TTRQQRKRVSLEPHQG GPGTPESKKATSCFPR R V S S K K 0 0 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 15 0 1561.7736 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1974 1988 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 0.00035167 76.526 By MS/MS By MS/MS 2 2 39547000 20729000 18817000 3841 79 4132 8663;8664;8665;8666 7196;7197;7198 7197 3233 3 VSPSDTTPLVSR TPQDYEMRVSPSDTTP DTTPLVSRSVPPVKLE R V S S R S 0 1 0 1 0 0 0 0 0 0 1 0 0 0 2 3 2 0 0 2 0 0 12 0 1257.6565 Q9HCK8 Q9HCK8 2045 2056 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes yes 2 0.0015151 82.069 By MS/MS By MS/MS 1 1 8211700 3695700 4516000 3842 2032 4133 8667;8668 7199;7200;7201;7202 7202 2903 4 VSPSTSYTPSR YVNANQARVSPSTSYT STSYTPSRHKRSYEDD R V S S R H 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 0 1 1 0 0 11 0 1180.5724 Q9BTE3 Q9BTE3 153 163 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 2 0.00078816 107.39 By MS/MS By matching 1 1 2945000 1359500 1585500 3843 1960 4134 8669;8670 7203 7203 2777;3913 1 VSSLCNNNK IANDDLLKVSSLCNNN SSLCNNNKLSRKTSIP K V S N K L 0 0 3 0 1 0 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 9 0 1034.4815 A0A075B754;Q96QE3 A0A075B754 552 560 ATAD5 ATPase family AAA domain-containing protein 5 yes no 1 0.020643 45.952 By MS/MS 1 3465200 3465200 0 3844 13 4135 8671 7204 7204 12 0 VSSPTVNTTLR GGWYKACKVSSPTVNT PTVNTTLRNLGALYRR K V S L R N 0 1 1 0 0 0 0 0 0 0 1 0 0 0 1 2 3 0 0 2 0 0 11 0 1173.6354 Q9NSK0 Q9NSK0 458 468 KLC4 Kinesin light chain 4 yes yes 2 0.013999 59.426 By matching By MS/MS 1 1 4846700 2513300 2333400 3845 2052 4136 8672;8673 7205 7205 2928 1 VSSPVFGATSSIK PQEELPTRVSSPVFGA FGATSSIKSGLDLNTS R V S I K S 1 0 0 0 0 0 0 1 0 1 0 1 0 1 1 4 1 0 0 2 0 0 13 0 1278.682 F6Q6H0;I6L8A6;Q99708 F6Q6H0 325 337 RBBP8 DNA endonuclease RBBP8 yes no 2 0.0089959 60.691 By matching By MS/MS 1 1 6440200 2947000 3493200 3846 726 4137 8674;8675 7206 7206 965 1 VSSQSFSEIER KKGLGAQKVSSQSFSE QSFSEIERQAQVAEKL K V S E R Q 0 1 0 0 0 1 2 0 0 1 0 0 0 1 0 4 0 0 0 1 0 0 11 0 1267.6044 A0A0D9SF70;G5E9L0;Q8N6H7;E9PQP3;E9PIY6 A0A0D9SF70 100 110 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 2 0.0037322 78.401 By MS/MS By MS/MS 1 1 2187100 1050600 1136400 3847 233 4138 8676;8677 7207;7208 7207 341 2 VTAEADSSSPTGILATSESK ERILRRRKVTAEADSS ILATSESKSMPVLGSV K V T S K S 3 0 0 1 0 0 2 1 0 1 1 1 0 0 1 5 3 0 0 1 0 0 20 0 1949.9429 A0MZ66 A0MZ66 486 505 KIAA1598 Shootin-1 yes yes 2 0.020898 46.964 By matching By MS/MS 1 1 1312400 447100 865270 3848 309 4139 8678;8679 7209 7209 440;441;442 1 VTASPLQRLGNK PQASLSTKVTASPLQR PLQRLGNKTEIAHSVL K V T N K T 1 1 1 0 0 1 0 1 0 0 2 1 0 0 1 1 1 0 0 1 0 0 12 1 1282.7357 Q4VXZ8;Q9NUI1 Q4VXZ8 219 230 DECR2 Peroxisomal 2,4-dienoyl-CoA reductase yes no 2 0.0031645 69.216 By MS/MS 1 3497400 0 3497400 3849 1591 4140 8680 7210 7210 215 2207 1 VTEGTIREEQEYEEEVEEEPRPAAK GEYRPHHRVTEGTIRE EEPRPAAKVVEREEAV R V T A K V 2 2 0 0 0 1 10 1 0 1 0 1 0 0 2 0 2 0 1 2 0 0 25 2 2946.3731 O43491;H0Y5B0;E9PK52;E9PHY5;E9PMV8;Q6R5J7 O43491 762 786 EPB41L2 Band 4.1-like protein 2 yes no 3;4 0.00034063 62.064 By matching By MS/MS 1 2 31203000 12170000 19033000 3850 1125 4141 8681;8682;8683 7211;7212 7211 3606;4242 2 VTGDLFYTHVTTMGQR SGLALDHKVTGDLFYT HVTTMGQRLSQKAPSL K V T Q R L 0 1 0 1 0 1 0 2 1 0 1 0 1 1 0 0 4 0 1 2 0 0 16 0 1824.8829 E9PJ68;O75387 E9PJ68 214 229 SLC43A1 Large neutral amino acids transporter small subunit 3 yes no 3 0.0044789 50.024 By matching By MS/MS 1 1 755780 234630 521150 3851 647 4142 8684;8685 7213 7213 4155 1 VTGEEWLVTTVGAYLPAVFEEVLDLVDAVILTEK WDRDGKERVTGEEWLV DAVILTEKTALHLRAR R V T E K T 3 0 0 2 0 0 5 2 0 1 5 1 0 1 1 0 4 1 1 7 0 0 34 0 3717.9645 Q14764 Q14764 191 224 MVP Major vault protein yes yes 3 0.00025267 48.467 By MS/MS 1 9802200 0 9802200 3852 1528 4143 8686 7214 7214 1 VTKFMYHR V T H R 0 1 0 0 0 0 0 0 1 0 0 1 1 1 0 0 1 0 1 1 0 0 8 1 1080.5539 REV__E5RJG9 yes yes 2 0.022465 60.972 By MS/MS 1 374190 374190 0 + 3853 2197 4144 8687 7215 7215 319 4474 0 VTKNEEPSEEEIDAPKPK VVSSKTKKVTKNEEPS EIDAPKPKKMKKEKEM K V T P K K 1 0 1 1 0 0 5 0 0 1 0 3 0 0 3 1 1 0 0 1 0 0 18 2 2039.0059 Q9NR30 Q9NR30 114 131 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.0031174 72.864 By MS/MS By matching 1 1 14698000 8027900 6670500 3854 2045 4145 8688;8689 7216 7216 2923 1 VTLYNTDQDGSDSPR AINTVTNKVTLYNTDQ QDGSDSPRSSLNNSLS K V T P R S 0 1 1 3 0 1 0 1 0 0 1 0 0 0 1 2 2 0 1 1 0 0 15 0 1666.7435 C9JXI1;C9JVP0;Q9UPW0 C9JXI1 22 36 FOXJ3 Forkhead box protein J3 yes no 2 4.5099E-75 167.69 By MS/MS By matching 1 1 7325100 3736600 3588400 3855 483 4146 8690;8691 7217 7217 671 1 VTNDISPESSPGVGR FGVESDKRVTNDISPE ESSPGVGRRRTKTPHT R V T G R R 0 1 1 1 0 0 1 2 0 1 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1513.7372 E5RGQ4;E9PGW9;E7EV93;A6NNN6;E7ETA6;Q15154 E5RGQ4 60 74 PCM1 Pericentriolar material 1 protein yes no 2 9.2126E-05 92.952 By MS/MS By MS/MS 3 3 20186000 10033000 10153000 3856 333 4147;4148 8692;8693;8694;8695;8696;8697 7218;7219;7220;7221 7220 472;473;474 4 VTPPEGYEVVTVFPK CEKHARERVTPPEGYE EVVTVFPK________ R V T P K - 0 0 0 0 0 0 2 1 0 0 0 1 0 1 3 0 2 0 1 4 0 0 15 0 1660.8712 O00151 O00151 315 329 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.0025686 60.255 By MS/MS By MS/MS 1 1 7994800 3622100 4372700 3857 1077 4149 8698;8699 7222;7223 7222 4222 2 VTQHESDNENEIQIQNK DSLEVERRVTQHESDN NEIQIQNKLKKDFPKQ R V T N K L 0 0 3 1 0 3 3 0 1 2 0 1 0 0 0 1 1 0 0 1 0 0 17 0 2024.9399 Q5VZL5 Q5VZL5 117 133 ZMYM4 Zinc finger MYM-type protein 4 yes yes 2;3 0.00040602 90.765 By MS/MS By MS/MS 2 2 45670000 21199000 24470000 3858 1658 4150 8700;8701;8702;8703 7224;7225;7226 7224 2319 3 VTSGGVSESPSGFSK KKGAKRPRVTSGGVSE ESPSGFSKHIQSNLDF R V T S K H 0 0 0 0 0 0 1 3 0 0 0 1 0 1 1 5 1 0 0 2 0 0 15 0 1424.6783 J3KN87;E7EPP6;O14757 J3KN87 278 292 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 2.7058E-170 204.17 By MS/MS By MS/MS 1 1 29628000 14645000 14983000 3859 571 4151 8704;8705 7227;7228;7229 7227 761 3 VTVSRASSSR LSPSPSSRVTVSRASS VSRASSSRSVRTTRGK R V T S R S 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 2 0 0 10 1 1048.5625 P20700 P20700 398 407 LMNB1 Lamin-B1 yes yes 2 0.021342 73.881 By MS/MS By matching 1 1 18208000 9745700 8462000 3860 1300 4152 8706;8707 7230 7230 1710 0 VVDYSQFQESDDADEDYGR SRPVRNRKVVDYSQFQ DADEDYGRDSGPPTKK K V V G R D 1 1 0 5 0 2 2 1 0 0 0 0 0 1 0 2 0 0 2 2 0 0 19 0 2236.9033 Q9H1E3 Q9H1E3 10 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 2.3619E-114 174.19 By MS/MS By MS/MS 4 4 815940000 342920000 473020000 3861 1992 4153;4154 8708;8709;8710;8711;8712;8713;8714;8715 7231;7232;7233;7234;7235;7236;7237;7238 7236 447 2848;4432 7 VVDYSQFQESDDADEDYGRDSGPPTK SRPVRNRKVVDYSQFQ RDSGPPTKKIRSSPRE K V V T K K 1 1 0 6 0 2 2 2 0 0 0 1 0 1 2 3 1 0 2 2 0 0 26 1 2919.2319 Q9H1E3 Q9H1E3 10 35 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 5.9096E-06 67.979 By matching By MS/MS 1 1 285090000 130430000 154660000 3862 1992 4155 8716;8717 7239 7239 2848;4432 1 VVDYSQFQESDDADEDYGRDSGPPTKK SRPVRNRKVVDYSQFQ DSGPPTKKIRSSPREA K V V K K I 1 1 0 6 0 2 2 2 0 0 0 2 0 1 2 3 1 0 2 2 0 0 27 2 3047.3268 Q9H1E3 Q9H1E3 10 36 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 4 0.011734 45.579 By matching By MS/MS 1 1 210840000 119170000 91671000 3863 1992 4156 8718;8719 7240 7240 2848;4432 1 VVEAVNSDSDSEFGIPK KRAPKQKKVVEAVNSD DSEFGIPKKTTTPKGK K V V P K K 1 0 1 2 0 0 2 1 0 1 0 1 0 1 1 3 0 0 0 3 0 0 17 0 1791.8527 Q02880 Q02880 1516 1532 TOP2B DNA topoisomerase 2-beta yes yes 2 6.0462E-09 103.66 By MS/MS By MS/MS 2 2 16954000 8439500 8514600 3864 1456 4157;4158 8720;8721;8722;8723 7241;7242;7243;7244;7245;7246;7247;7248;7249;7250 7249 1944;1945;1946 10 VVEAVNSDSDSEFGIPKK KRAPKQKKVVEAVNSD SEFGIPKKTTTPKGKG K V V K K T 1 0 1 2 0 0 2 1 0 1 0 2 0 1 1 3 0 0 0 3 0 0 18 1 1919.9476 Q02880 Q02880 1516 1533 TOP2B DNA topoisomerase 2-beta yes yes 2 0.0086159 49.632 By MS/MS By matching 1 1 2880200 1126300 1753900 3865 1456 4159 8724;8725 7251 7251 1944;1945;1946 1 VVEAVNSDSDSEFGIPKKTTTPK KRAPKQKKVVEAVNSD PKKTTTPKGKGRGAKK K V V P K G 1 0 1 2 0 0 2 1 0 1 0 3 0 1 2 3 3 0 0 3 0 0 23 2 2448.2384 Q02880 Q02880 1516 1538 TOP2B DNA topoisomerase 2-beta yes yes 3 0.019726 48.919 By MS/MS By matching 1 1 4271700 2500200 1771500 3866 1456 4160 8726;8727 7252 7252 1944;1945;1946 1 VVLAYEPVWAIGTGK DNVKDWSKVVLAYEPV VWAIGTGKTATPQQAQ K V V G K T 2 0 0 0 0 0 1 2 0 1 1 1 0 0 1 0 1 1 1 3 0 0 15 0 1601.8817 P60174;U3KQF3;U3KPZ0 P60174 198 212 TPI1 Triosephosphate isomerase yes no 2 0.0029591 68.676 By matching By MS/MS 1 1 1113300 438790 674520 3867 1420 4161 8728;8729 7253 7253 1 VVLPSPK V V P K 0 0 0 0 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 2 0 0 7 0 738.46398 REV__Q92859 yes yes 2 0.017623 85.862 By MS/MS By MS/MS 2 2 9571300 5101700 4469600 + 3868 2212 4162 8730;8731;8732;8733 7254;7255 7254 3199 2 VVNGAAASQPPSKR KAKAGELKVVNGAAAS ASQPPSKRKRRWDQTA K V V K R K 3 1 1 0 0 1 0 1 0 0 0 1 0 0 2 2 0 0 0 2 0 0 14 1 1380.7474 O75533 O75533 183 196 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.00020457 81.713 By MS/MS By MS/MS 3 2 6968300 3538100 3430200 3869 1166 4163;4164 8734;8735;8736;8737;8738 7256;7257;7258;7259;7260 7258 158 1557 5 VVNTDHGSPEQLQIPVTDSGR PSGSQRARVVNTDHGS IPVTDSGRHILEDSCA R V V G R H 0 1 1 2 0 2 1 2 1 1 1 0 0 0 2 2 2 0 0 3 0 0 21 0 2248.1084 Q6IQ49 Q6IQ49 271 291 SDE2 Protein SDE2 homolog yes yes 3 0.011667 51.473 By matching By MS/MS 1 1 15504000 7844200 7659600 3870 1669 4165 8739;8740 7261 7261 3815 1 VVPEDGSPEKR KEVQSSCRVVPEDGSP EDGSPEKRCPGGVLSC R V V K R C 0 1 0 1 0 0 2 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 11 1 1211.6146 Q02040 Q02040 531 541 AKAP17A A-kinase anchor protein 17A yes yes 2;3 0.00067261 94.402 By MS/MS By MS/MS 3 2 9531100 5412800 4118400 3871 1454 4166 8741;8742;8743;8744;8745 7262;7263;7264;7265;7266;7267;7268 7268 1940 7 VVPGQFDDADSSDSENR YRRLLMSRVVPGQFDD DSSDSENRDLKTVKEK R V V N R D 1 1 1 4 0 1 1 1 0 0 0 0 0 1 1 3 0 0 0 2 0 0 17 0 1836.7762 E9PFQ8;Q9BRS2 E9PFQ8 11 27 RIOK1 Serine/threonine-protein kinase RIO1 yes no 2 0.0040209 60.541 By MS/MS By matching 1 1 10139000 4656200 5482700 3872 627 4167 8746;8747 7269 7269 850 1 VVPSFLPVDQGGSLVGR EGAPPEDKVVPSFLPV QGGSLVGRNGVGGMAK K V V G R N 0 1 0 1 0 1 0 3 0 0 2 0 0 1 2 2 0 0 0 4 0 0 17 0 1725.9414 Q14126 Q14126 668 684 DSG2 Desmoglein-2 yes yes 2;3 0.0039038 60.764 By matching By MS/MS 1 2 9810700 3730700 6080000 3873 1514 4168 8748;8749;8750 7270;7271 7270 2070 2 VVQMLGSLGGQINK SLEEIRIRVVQMLGSL SLGGQINKNLLTVTSS R V V N K N 0 0 1 0 0 2 0 3 0 1 2 1 1 0 0 1 0 0 0 2 0 0 14 0 1442.7915 P78527 P78527 855 868 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0045906 65.565 By MS/MS 1 1751500 0 1751500 3874 1443 4169 8751 7272 7272 1923 1 VVQNSADAGDMR ________________ SADAGDMRAGVQLEPF M V V M R A 2 1 1 2 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 2 0 0 12 0 1261.5721 A0A0U1RRE0;Q96PC2 A0A0U1RRE0 2 13 IP6K3 Inositol hexakisphosphate kinase 3 yes no 2 0.021312 45.137 By MS/MS 1 753740 753740 0 3875 275 4170 8752 7273 7273 45 0 VVSEDFLQDVSASTK EVKEANIRVVSEDFLQ QDVSASTKSLQELFLA R V V T K S 1 0 0 2 0 1 1 0 0 0 1 1 0 1 0 3 1 0 0 3 0 0 15 0 1623.7992 P09874 P09874 453 467 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 1.4168E-05 98.156 By MS/MS By MS/MS 1 1 2015800 1141500 874240 3876 1244 4171 8753;8754 7274;7275 7274 2 VVSSTSEEEEAFTEK FTGIRPARVVSSTSEE EEEAFTEKFLKINCKY R V V E K F 1 0 0 0 0 0 5 0 0 0 0 1 0 1 0 3 2 0 0 2 0 0 15 0 1670.7523 Q8N573 Q8N573 199 213 OXR1 Oxidation resistance protein 1 yes yes 2 3.8117E-15 120.92 By MS/MS By MS/MS 3 3 27280000 12600000 14680000 3877 1779 4172;4173 8755;8756;8757;8758;8759;8760 7276;7277;7278;7279;7280 7279 2500;2501;2502 5 VVSSVSSSPR FQQSAFNRVVSSVSSS SSVSSSPRQTMDYDDE R V V P R Q 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 3 0 0 10 0 1003.5298 P29375 P29375 1324 1333 KDM5A Lysine-specific demethylase 5A yes yes 2 0.015118 63.864 By MS/MS 1 0 0 0 3878 1324 4174 8761 7281 7281 1740;1741 1 VVSVLTVLHQDWLNGK EQFNSTYRVVSVLTVL HQDWLNGKEYKCKVSN R V V G K E 0 0 1 1 0 1 0 1 1 0 3 1 0 0 0 1 1 1 0 4 0 0 16 0 1806.9992 P01861;A0A0A0MS08;P01857;P01860 P01861 182 197 IGHG4;IGHG1;IGHG3 Ig gamma-4 chain C region;Ig gamma-1 chain C region;Ig gamma-3 chain C region yes no 2;3 3.0148E-138 189.99 By MS/MS By MS/MS 3 3 29206000 15735000 13471000 3879 1209 4175;4176 8762;8763;8764;8765;8766;8767 7282;7283;7284;7285;7286;7287;7288 7282 161 7 VVSVLTVVHQDWLNGK EQFNSTFRVVSVLTVV HQDWLNGKEYKCKVSN R V V G K E 0 0 1 1 0 1 0 1 1 0 2 1 0 0 0 1 1 1 0 5 0 0 16 0 1792.9836 P01859 P01859 181 196 IGHG2 Ig gamma-2 chain C region yes yes 2;3 4.1362E-118 182.72 By MS/MS By MS/MS 2 2 6298100 3365500 2932600 3880 1208 4177 8768;8769;8770;8771 7289;7290;7291 7291 160;402 3 VVVSGAR KDLAKHIRVVVSGARL RVVVSGARLPWVGGPE R V V A R L 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 3 0 0 7 0 686.40752 H0YDN6 H0YDN6 29 35 DGKZ yes yes 2 0.02006 84.498 By MS/MS By matching 1 1 3756600 1772400 1984200 3881 876 4178 8772;8773 7292 7292 1179 1 VVVSPTK AAATSAKKVVVSPTKK KVVVSPTKKVAVATPA K V V T K K 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 3 0 0 7 0 728.44324 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 70 NCL Nucleolin yes no 2 0.021306 94.309 By MS/MS By MS/MS 1 1 23019000 9868600 13151000 3882 1294 4179 8774;8775 7293;7294 7294 1703;3664 2 VVVSPTKK AAATSAKKVVVSPTKK VVVSPTKKVAVATPAK K V V K K V 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 71 NCL Nucleolin yes no 2 0.015861 94.409 By MS/MS By MS/MS 1 1 576580000 282120000 294450000 3883 1294 4180 8776;8777 7295;7296;7297 7296 1703;3664 3 VWSPLVTEEGK TVARSEHKVWSPLVTE PLVTEEGKRHPYKMNL K V W G K R 0 0 0 0 0 0 2 1 0 0 1 1 0 0 1 1 1 1 0 2 0 0 11 0 1243.6449 O00151 O00151 88 98 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 1.488E-05 88.021 By MS/MS 1 0 0 0 3884 1077 4181 8778 7298 7298 1419 1 VYAPASTLVDQPYANEGTVVVTER QSLIVTERVYAPASTL GTVVVTERVIQPHGGG R V Y E R V 3 1 1 1 0 1 2 1 0 0 1 0 0 0 2 1 3 0 2 5 0 0 24 0 2578.2915 Q14126 Q14126 967 990 DSG2 Desmoglein-2 yes yes 3 0.013058 42.454 By MS/MS By matching 1 1 9782900 4449200 5333700 3885 1514 4182 8779;8780 7299 7299 2071;3746 1 VYDALNVLMAMNIISKEK DQKNIRRRVYDALNVL MNIISKEKKEIKWIGL R V Y E K K 2 0 2 1 0 0 1 0 0 2 2 2 2 0 0 1 0 0 1 2 0 0 18 1 2051.0795 Q5JSB5;Q14186;C9J977;C9J461;C9J872;Q14188 Q5JSB5 169 186 TFDP1;TFDP2 Transcription factor Dp-1;Transcription factor Dp-2 yes no 2 0.00089761 65.179 By MS/MS By matching 1 1 10252000 9257800 994030 3886 1516 4183 8781;8782 7300 7300 212;213 4349 1 VYEHTSRFSPK VDSEKSNKVYEHTSRF HTSRFSPKKTSSNCNG K V Y P K K 0 1 0 0 0 0 1 0 1 0 0 1 0 1 1 2 1 0 1 1 0 0 11 1 1349.6728 P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3 P46100 308 318 ATRX Transcriptional regulator ATRX yes no 3 0.0050968 63.76 By MS/MS By MS/MS 1 1 9657500 4483100 5174400 3887 1364 4184 8783;8784 7301;7302 7301 1802 2 VYENVGLMQQQK EMREDSARVYENVGLM VGLMQQQKSFR_____ R V Y Q K S 0 0 1 0 0 3 1 1 0 0 1 1 1 0 0 0 0 0 1 2 0 0 12 0 1435.7129 Q06124 Q06124 583 594 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 2;3 0 267.29 By MS/MS By MS/MS 3 4 59143000 23291000 35852000 3888 1467 4185;4186 8785;8786;8787;8788;8789;8790;8791 7303;7304;7305;7306;7307;7308;7309 7306 199 4331 7 VYESIGQYGGETVK LEPITDERVYESIGQY QYGGETVKIVRIEKAR R V Y V K I 0 0 0 0 0 1 2 3 0 1 0 1 0 0 0 1 1 0 2 2 0 0 14 0 1528.7409 Q8N3R9 Q8N3R9 242 255 MPP5 MAGUK p55 subfamily member 5 yes yes 2 1.9309E-07 107.06 By MS/MS By MS/MS 1 1 7647300 3044700 4602600 3889 1775 4187 8792;8793 7310;7311 7310 4394 2 VYGVSLATHLQELGR MTATHFPRVYGVSLAT THLQELGREIALPIEA R V Y G R E 1 1 0 0 0 1 1 2 1 0 3 0 0 0 0 1 1 0 1 2 0 0 15 0 1641.8839 Q9Y3L3 Q9Y3L3 273 287 SH3BP1 SH3 domain-binding protein 1 yes yes 3 0.018476 40.962 By matching By MS/MS 1 1 999070 560780 438290 3890 2153 4188 8794;8795 7312 7312 3131;4466 0 VYNLLTPDSK EEPKIDFRVYNLLTPD NLLTPDSKMGEPVSES R V Y S K M 0 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 1 0 1 1 0 0 10 0 1148.6077 H0YC29;E5RJ97;E5RFF3;Q9UHF7 H0YC29 550 559 TRPS1 Zinc finger transcription factor Trps1 yes no 2 0.0071528 69.721 By MS/MS By matching 1 1 1277300 618790 658520 3891 546 4189 8796;8797 7313 7313 728 1 VYQVTEQQISEKLK TVLVVKDRVYQVTEQQ QQISEKLKTIMKENTE R V Y L K T 0 0 0 0 0 3 2 0 0 1 1 2 0 0 0 1 1 0 1 2 0 0 14 1 1691.9094 A0A0A0MRH6;Q5JRA6 A0A0A0MRH6 791 804 MIA3 Melanoma inhibitory activity protein 3 yes no 3 0.0011804 69.379 By MS/MS 1 2153200 0 2153200 3892 141 4190 8798 7314 7314 343;344 3256 1 VYSLGEENSTNNSTGQSR AKKVSGFKVYSLGEEN NNSTGQSRAVIAAAAR K V Y S R A 0 1 3 0 0 1 2 2 0 0 1 0 0 0 0 4 2 0 1 1 0 0 18 0 1941.8664 Q9ULK5 Q9ULK5 307 324 VANGL2 Vang-like protein 2 yes yes 2 0.0011358 77.894 By MS/MS By MS/MS 1 1 2228900 1083900 1145000 3893 2120 4191 8799;8800 7315;7316 7315 4462 2 VYTYIQSR SSCYEHQRVYTYIQSR VYTYIQSRFYRAPEVI R V Y S R F 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 2 1 0 0 8 0 1028.5291 Q92630;A0A0A0MTH5;Q9NR20 Q92630 379 386 DYRK2;DYRK4 Dual specificity tyrosine-phosphorylation-regulated kinase 2;Dual specificity tyrosine-phosphorylation-regulated kinase 4 yes no 2 0.0086971 77.282 By MS/MS By MS/MS 1 1 1076900 423250 653670 3894 1856 4192 8801;8802 7317;7318;7319 7319 4409 3 VYYTAGYNSPVK DGKVFDEKVYYTAGYN AGYNSPVKLLNRNNEV K V Y V K L 1 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 1 0 3 2 0 0 12 0 1360.6663 Q9Y5Z4 Q9Y5Z4 173 184 HEBP2 Heme-binding protein 2 yes yes 2 0.0013649 88.224 By matching By MS/MS 1 1 2718000 1212900 1505100 3895 2173 4193 8803;8804 7320 7320 3157 1 WCALSHHER TDECKPVKWCALSHHE CALSHHERLKCDEWSV K W C E R L 1 1 0 0 1 0 1 0 2 0 1 0 0 0 0 1 0 1 0 0 0 0 9 0 1194.5353 P02787 P02787 363 371 TF Serotransferrin yes yes 3 0.011504 66.962 By matching By MS/MS 1 1 1854000 938650 915310 3896 1213 4194 8805;8806 7321 7321 1 WDEQTSNTKGDDDEESDEEAVK RLMLHRIKWDEQTSNT ESDEEAVKKTNKCVLV K W D V K K 1 0 1 5 0 1 5 1 0 0 0 2 0 0 0 2 2 1 0 1 0 0 22 1 2526.0154 O43395 O43395 604 625 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 3 0.0085697 62.468 By matching By MS/MS 1 1 5687600 3296300 2391300 3897 1122 4195 8807;8808 7322 7322 3604 1 WDGSEEDEDNSK KAQKSNKKWDGSEEDE EEDEDNSKKIKERSRI K W D S K K 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 2 0 1 0 0 0 0 12 0 1409.5219 A0A087WUT6;O60841 A0A087WUT6 161 172 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0014484 84.753 By MS/MS By MS/MS 2 2 12276000 6979400 5296300 3898 43 4196 8809;8810;8811;8812 7323;7324;7325;7326;7327 7324 52 5 WDGSEEDEDNSKK KAQKSNKKWDGSEEDE EDEDNSKKIKERSRIN K W D K K I 0 0 1 3 0 0 3 1 0 0 0 2 0 0 0 2 0 1 0 0 0 0 13 1 1537.6169 A0A087WUT6;O60841 A0A087WUT6 161 173 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0013831 87.831 By MS/MS 1 3817300 3817300 0 3899 43 4197 8813 7328 7328 52 1 WDKDDFESEEEDVK MIQVPQSKWDKDDFES ESEEEDVKSTQPISSV K W D V K S 0 0 0 4 0 0 4 0 0 0 0 2 0 1 0 1 0 1 0 1 0 0 14 1 1769.7268 Q7Z6E9 Q7Z6E9 1321 1334 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 2 0.0041479 72.523 By matching By MS/MS 1 1 7891200 3434300 4456900 3900 1720 4198 8814;8815 7329 7329 2421 1 WDQTADQTPGATPK PPSKRKRRWDQTADQT QTPGATPKKLSSWDQA R W D P K K 2 0 0 2 0 2 0 1 0 0 0 1 0 0 2 0 3 1 0 0 0 0 14 0 1514.7001 O75533 O75533 200 213 SF3B1 Splicing factor 3B subunit 1 yes yes 2 4.7939E-12 114.01 By matching By MS/MS 2 2 17911000 9571400 8339800 3901 1166 4199;4200 8816;8817;8818;8819 7330;7331 7330 3628;3629 1 WDTGENPIYK EKEKMNAKWDTGENPI TGENPIYKSAVTTVVN K W D Y K S 0 0 1 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 0 0 0 10 0 1221.5666 P05556 P05556 775 784 ITGB1 Integrin beta-1 yes yes 2 9.5116E-67 178.94 By MS/MS By MS/MS 1 1 38548000 17445000 21103000 3902 1223 4201 8820;8821 7332;7333 7332 4257 2 WHWSSGSLVSYK HDPKKNRRWHWSSGSL SGSLVSYKSWGIGAPS R W H Y K S 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 4 0 2 1 1 0 0 12 0 1435.6884 P05451;H7BZ24;P48304 P05451 111 122 REG1A;REG1B Lithostathine-1-alpha;Lithostathine-1-beta yes no 3 0.0055027 57.164 By MS/MS By matching 1 1 896850 632530 264320 3903 1221 4202 8822;8823 7334;7335 7334 2 WLDDLLASPPPSGGGAR PGPESSSRWLDDLLAS PPSGGGARRGAGAELK R W L A R R 2 1 0 2 0 0 0 3 0 0 3 0 0 0 3 2 0 1 0 0 0 0 17 0 1707.858 Q9C0C2 Q9C0C2 684 700 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 8.0795E-06 97.579 By MS/MS 1 3153900 0 3153900 3904 1985 4203 8824 7336 7336 2832 1 WLDESDAEMELR FLAPDFDRWLDESDAE SDAEMELRAKEEERLN R W L L R A 1 1 0 2 0 0 3 0 0 0 2 0 1 0 0 1 0 1 0 0 0 0 12 0 1492.6504 H3BPZ1;H3BS72;Q9P035 H3BPZ1 85 96 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 2 0.0013719 90.793 By MS/MS By MS/MS 3 3 131140000 56262000 74874000 3905 917 4204;4205 8825;8826;8827;8828;8829;8830 7337;7338;7339;7340;7341;7342 7341 109 1229 6 WLIQKGQTQKAR LFLPESPRWLIQKGQT KGQTQKARRILSQMRG R W L A R R 1 1 0 0 0 3 0 1 0 1 1 2 0 0 0 0 1 1 0 0 0 0 12 2 1455.831 E9PE47;Q96QE2 E9PE47 265 276 SLC2A13 Proton myo-inositol cotransporter yes no 2 0.017565 48.283 By MS/MS 1 0 0 0 3906 615 4206 8831 7343 7343 3431 1 WLNSGRGDEASEEGQNGSSPK KQQREKTRWLNSGRGD GQNGSSPKSKTKWTKE R W L P K S 1 1 2 1 0 1 3 4 0 0 1 1 0 0 1 4 0 1 0 0 0 0 21 1 2203.973 E7EV99;E7ENY0;P35611;H0Y9H2 E7EV99 447 467 ADD1 Alpha-adducin yes no 3 1.1713E-11 105.99 By MS/MS By MS/MS 2 2 38550000 18902000 19648000 3907 568 4207;4208 8832;8833;8834;8835 7344;7345;7346 7345 87 753;754 3 WLPGHVNWEKEQSTGRG VVSTWNTRWLPGHVNW KEQSTGRG________ R W L R G - 0 1 1 0 0 1 2 3 1 0 1 1 0 0 1 1 1 2 0 1 0 0 17 2 1979.9602 F1LLU6 F1LLU6 144 160 BAG1 yes yes 2 0.010457 49.5 By MS/MS 1 657280 657280 0 3908 684 4209 8836 7347 7347 104;381 1 WLQGSQELPR SPKDVLVRWLQGSQEL QGSQELPREKYLTWAS R W L P R E 0 1 0 0 0 2 1 1 0 0 2 0 0 0 1 1 0 1 0 0 0 0 10 0 1212.6251 P01876;A0A0G2JMB2;P01877 P01876 264 273 IGHA1;IGHA2 Ig alpha-1 chain C region;Ig alpha-2 chain C region yes no 2 0.014795 63.419 By MS/MS By MS/MS 1 1 1579700 904140 675520 3909 1210 4210 8837;8838 7348;7349 7348 2 WLREAEEESDHN KSVTAFFKWLREAEEE AEEESDHN________ K W L H N - 1 1 1 1 0 0 4 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 12 1 1513.6433 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1425 1436 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2;3 9.0105E-06 108.36 By MS/MS By MS/MS 2 2 54260000 30319000 23941000 3910 595 4211 8839;8840;8841;8842 7350;7351;7352 7351 811 3 WQPDTEEEYEDSSGNVVNKK KLQKASERWQPDTEEE SGNVVNKKTYEDLKRQ R W Q K K T 0 0 2 2 0 1 4 1 0 0 0 2 0 0 1 2 1 1 1 2 0 0 20 1 2353.0346 Q12874 Q12874 471 490 SF3A3 Splicing factor 3A subunit 3 yes yes 3 0.0032179 50.392 By matching By MS/MS 1 1 7405900 3574100 3831800 3911 1480 4212 8843;8844 7353 7353 4339 1 WRPHSPDGPR GSRRDGERWRPHSPDG PHSPDGPRSAGWREHM R W R P R S 0 2 0 1 0 0 0 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 10 1 1203.5897 I1E4Y6;Q6Y7W6;C9JH78;C9IYH5 I1E4Y6 254 263 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2;3 0.0011849 92.039 By MS/MS By MS/MS 2 2 42679000 23843000 18836000 3912 979 4213 8845;8846;8847;8848 7354;7355;7356 7354 1316 3 WTKPSSFSDSER GEDMLVWRWTKPSSFS SSFSDSER________ R W T E R - 0 1 0 1 0 0 1 0 0 0 0 1 0 1 1 4 1 1 0 0 0 0 12 1 1425.6525 H0Y9B7;Q8NC56 H0Y9B7 74 85 LEMD2 LEM domain-containing protein 2 yes no 2 0.003305 91.202 By MS/MS By MS/MS 1 1 26815000 13081000 13734000 3913 857 4214 8849;8850 7357;7358 7358 1153 2 WVQDSMDHLDKQTQTPKT ICADPKQKWVQDSMDH KQTQTPKT________ K W V K T - 0 0 0 3 0 3 0 0 1 0 1 2 1 0 1 1 3 1 0 1 0 0 18 2 2157.0161 P13500 P13500 82 99 CCL2 C-C motif chemokine 2 yes yes 2 0.021449 41.052 By MS/MS 1 0 0 0 3914 1268 4215 8851 7359 7359 160 3654;3655 1 YAALSDQGLDIK KVRPSASRYAALSDQG SDQGLDIKAAFQPEAN R Y A I K A 2 0 0 2 0 1 0 1 0 1 2 1 0 0 0 1 0 0 1 0 0 0 12 0 1292.6612 Q8WX93 Q8WX93 1348 1359 PALLD Palladin yes yes 2 0.00011016 102.52 By MS/MS By MS/MS 1 1 2379000 1240300 1138700 3915 1841 4216 8852;8853 7360;7361 7361 4401 2 YADFSISPNAVSAEEDGYTLFVAGFEDGGAGDSLSYHSGQK ENNTAYAKYADFSISP LSYHSGQKFSTFDRDQ K Y A Q K F 5 0 1 4 0 1 3 6 1 1 2 1 0 3 1 6 1 0 3 2 0 0 41 0 4257.8927 K7ES70;P55083 K7ES70 169 209 MFAP4 Microfibril-associated glycoprotein 4 yes no 3 1.6858E-15 63.79 By matching By MS/MS 1 1 77486000 37850000 39636000 3916 1054 4217 8854;8855 7362;7363 7363 2 YADLPGIAR ________________ ADLPGIARNEPDVYET K Y A A R N 2 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 9 0 974.51853 F8VRV7;F8VW18;F8W1I6;Q13561;F8W0U6 F8VRV7 6 14 DCTN2 Dynactin subunit 2 yes no 2 0.0045033 82.452 By MS/MS By MS/MS 1 1 9500800 4193400 5307400 3917 736 4218 8856;8857 7364;7365;7366;7367 7365 4163 4 YAKESLKEEDESDDDNM DIREEAEKYAKESLKE DESDDDNM________ K Y A N M - 1 0 1 4 0 0 4 0 0 0 1 2 1 0 0 2 0 0 1 0 0 0 17 2 2016.8106 H0YJ03;G3V4X5;P25788 H0YJ03 67 83 PSMA3 Proteasome subunit alpha type-3 yes no 3 0.0021305 60.549 By MS/MS By MS/MS 2 2 13335000 5566400 7768300 3918 800 4219;4220 8858;8859;8860;8861 7368;7369 7369 98 1060 2 YAKLTEAAEQNKEAIR AEEWFKCRYAKLTEAA EQNKEAIRSAKEEIAE R Y A I R S 4 1 1 0 0 1 3 0 0 1 1 2 0 0 0 0 1 0 1 0 0 0 16 2 1833.9585 P07197;E7ESP9;E7EMV2 P07197 296 311 NEFM Neurofilament medium polypeptide yes no 3 0.013687 47.532 By MS/MS By matching 1 1 928860 597390 331470 3919 1229 4221 8862;8863 7370 7370 165 4259 1 YALYDATYETK MLPDKDCRYALYDATY YDATYETKESKKEDLV R Y A T K E 2 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 2 0 3 0 0 0 11 0 1336.6187 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;Q9Y281 E9PP50 82 92 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2 0.021004 58.246 By matching By MS/MS 1 1 1295700 603480 692230 3920 675 4222 8864;8865 7371 7371 1 YANNSKFRSR Y A S R 1 2 2 0 0 0 0 0 0 0 0 1 0 1 0 2 0 0 1 0 0 0 10 2 1241.6265 REV__E5RIA2 yes no 3 0.022465 58.172 By MS/MS By matching 1 1 4129700 1845900 2283800 + 3921 2196 4223 8866;8867 7372 7372 4473 0 YATPQVIQAPGPR QSFASDPKYATPQVIQ VIQAPGPRAGPCILPI K Y A P R A 2 1 0 0 0 2 0 1 0 1 0 0 0 0 3 0 1 0 1 1 0 0 13 0 1396.7463 H0Y5H7;C9J1X3;Q07912 H0Y5H7 394 406 TNK2 Activated CDC42 kinase 1 yes no 2 0.0031075 64.654 By MS/MS By MS/MS 1 1 3616500 1628400 1988100 3922 436 4224 8868;8869 7373;7374 7373 4103 2 YCRPYRVYK EFVYDSTKYCRPYRVY CRPYRVYKNQIYIYPK K Y C Y K N 0 2 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 3 1 0 0 9 2 1303.6496 Q96BY6 Q96BY6 664 672 DOCK10 Dedicator of cytokinesis protein 10 yes yes 3 0.011778 44.377 By matching By MS/MS 1 1 10636000 3972100 6663900 3923 1878 4225 8870;8871 7375 7375 4415;4416 1 YDTLAQMLTLGNIR PGKINHMRYDTLAQML MLTLGNIRAGNKMIVM R Y D I R A 1 1 1 1 0 1 0 1 0 1 3 0 1 0 0 0 2 0 1 0 0 0 14 0 1607.8341 Q9UJA5 Q9UJA5 185 198 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes yes 2 0.0070781 59.871 By MS/MS 1 0 0 0 3924 2102 4226 8872 7376 7376 315 3955;4456 1 YEAPQATDGLAGALDAR ADQRKEVKYEAPQATD LAGALDARQQSTGAIP K Y E A R Q 5 1 0 2 0 1 1 2 0 0 2 0 0 0 1 0 1 0 1 0 0 0 17 0 1717.8271 O60784 O60784 386 402 TOM1 Target of Myb protein 1 yes yes 2 5.2441E-06 96.371 By matching By MS/MS 1 1 3685600 1704100 1981500 3925 1145 4227 8873;8874 7377 7377 4248 1 YEPQSPGYEPR EFESQSPRYEPQSPGY QSPGYEPRSPGYEPRS R Y E P R S 0 1 0 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 2 0 0 0 11 0 1321.5939 H3BS42;Q9H5H4 H3BS42 90 100 ZNF768 Zinc finger protein 768 yes no 2 0.0054794 71.548 By MS/MS By MS/MS 1 1 10199000 5542100 4656800 3926 928 4228 8875;8876 7378;7379;7380 7380 1244 3 YESSSYTDQFSR DLEQPTYRYESSSYTD SYTDQFSRNYEHRLRY R Y E S R N 0 1 0 1 0 1 1 0 0 0 0 0 0 1 0 4 1 0 2 0 0 0 12 0 1468.6107 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 969 980 TJP1 Tight junction protein ZO-1 yes no 2 0.00071451 83 By MS/MS By MS/MS 2 2 3251600 1458500 1793100 3927 100 4229 8877;8878;8879;8880 7381;7382;7383 7383 4018;4019 3 YEYDPDISPPR LSFPKNSKYEYDPDIS DPDISPPRKKQAKSHF K Y E P R K 0 1 0 2 0 0 1 0 0 1 0 0 0 0 3 1 0 0 2 0 0 0 11 0 1350.6092 Q9BRD0;H7C462 Q9BRD0 318 328 BUD13 BUD13 homolog yes no 2 0.0089758 63.602 By MS/MS By MS/MS 1 1 1994900 1019200 975660 3928 1955 4230 8881;8882 7384;7385;7386 7386 2769;4427 3 YFAHSILTVSEEEWNTGETYTCVVAHEALPNR PEPQAPGRYFAHSILT AHEALPNRVTERTVDK R Y F N R V 3 1 2 0 1 0 5 1 2 1 2 0 0 1 1 2 4 1 2 3 0 0 32 0 3722.7311 A0A087WYJ9;A0A1B0GUU9;P04220;P01871 A0A087WYJ9 391 422 IGHM Ig mu heavy chain disease protein;Ig mu chain C region yes no 4 6.5134E-11 80.832 By matching By MS/MS 1 1 26475000 15506000 10968000 3929 82 4231 8883;8884 7387 7387 1 YFDSGDYNMAK SAEEQKQKYFDSGDYN SGDYNMAKAKMKNKQL K Y F A K A 1 0 1 2 0 0 0 1 0 0 0 1 1 1 0 1 0 0 2 0 0 0 11 0 1309.5285 H3BQ52;H3BTD3;H3BMD8;A6NMQ3;Q5T5H1;P56211;O43768 H3BQ52 18 28 ARPP19;ENSA cAMP-regulated phosphoprotein 19;Alpha-endosulfine yes no 2 0.0028511 98.407 By MS/MS By MS/MS 2 3 38520000 18267000 20253000 3930 332 4232;4233 8885;8886;8887;8888;8889 7388;7389;7390;7391 7389 47 471;4063 4 YFLHQSHEEREHAEKLMK VALKNFAKYFLHQSHE EHAEKLMKLQNQRGGR K Y F M K L 1 1 0 0 0 1 4 0 3 0 2 2 1 1 0 1 0 0 1 0 0 0 18 2 2311.1168 E9PRK8;E9PKY7;G3V192;P02794 E9PRK8 55 72 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes no 4 0.0054535 58.658 By MS/MS 1 1601000 0 1601000 3931 659 4234 8890 7392 7392 376 894 0 YFQISQDEDESESED DKETYELRYFQISQDE EDESESED________ R Y F E D - 0 0 0 3 0 2 4 0 0 1 0 0 0 1 0 3 0 0 1 0 0 0 15 0 1819.6908 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 107 121 RPL22L1 60S ribosomal protein L22-like 1 yes no 2 5.0492E-11 113.54 By MS/MS By MS/MS 1 3 44653000 13525000 31127000 3932 492 4235 8891;8892;8893;8894 7393;7394;7395;7396;7397;7398;7399;7400;7401 7394 679;680 9 YFSLKPEEKDEK ELIAAEKKYFSLKPEE KPEEKDEKSTLEQKPS K Y F E K S 0 0 0 1 0 0 3 0 0 0 1 3 0 1 1 1 0 0 1 0 0 0 12 2 1511.7508 Q9Y5K6 Q9Y5K6 361 372 CD2AP CD2-associated protein yes yes 2 5.2661E-06 109.79 By matching By MS/MS 1 1 1619800 819890 799900 3933 2168 4236 8895;8896 7402 7402 4469 1 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR DKAERAKKYGGSVGSQ SQEPPTKREYDQCRIQ K Y G K R E 1 1 0 0 0 2 2 4 0 0 0 1 0 0 10 5 1 0 1 3 0 0 31 1 3082.536 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323 E9PS08 37 67 UBXN1 UBX domain-containing protein 1 yes no 3 0.0010644 45.511 By MS/MS By MS/MS 1 1 13579000 7616700 5962500 3934 34 4237 8897;8898 7403;7404 7403 37;38 2 YGIYAVENEHMNR PGGRGDMKYGIYAVEN VENEHMNRLQSQRAML K Y G N R L 1 1 2 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 2 1 0 0 13 0 1594.7198 H0YJL5;H0YJJ5;Q9UEU0 H0YJL5 29 41 VTI1B Vesicle transport through interaction with t-SNAREs homolog 1B yes no 2 0.0095921 53.124 By MS/MS By matching 1 1 1666500 855520 811000 3935 889 4238 8899;8900 7405 7405 4190 1 YGKDATNVGDEGGFAPNILENK LKNVIKEKYGKDATNV APNILENKEGLELLKT K Y G N K E 2 0 3 2 0 0 2 4 0 1 1 2 0 1 1 0 1 0 1 1 0 0 22 1 2308.0972 P06733 P06733 200 221 ENO1 Alpha-enolase yes yes 3 0.0089374 45.88 By MS/MS By MS/MS 1 1 5656000 2743500 2912400 3936 1227 4239 8901;8902 7406;7407 7407 2 YGLFKEENPYAR RHDEIRKKYGLFKEEN KEENPYARFENN____ K Y G A R F 1 1 1 0 0 0 2 1 0 0 1 1 0 1 1 0 0 0 2 0 0 0 12 1 1485.7252 A8MXQ1;P53801 A8MXQ1 144 155 PTTG1IP Pituitary tumor-transforming gene 1 protein-interacting protein yes no 2;3 8.5067E-09 121.6 By MS/MS By MS/MS 2 2 19128000 9405600 9722500 3937 344 4240 8903;8904;8905;8906 7408;7409;7410 7409 4077 3 YGLQDSDEEEEEHPSK FKVSHFSKYGLQDSDE EEEEHPSKTSTKKLKT K Y G S K T 0 0 0 2 0 1 5 1 1 0 1 1 0 0 1 2 0 0 1 0 0 0 16 0 1890.7755 P52948 P52948 883 898 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 2;3 4.3774E-13 107.98 By MS/MS By MS/MS 2 2 26535000 14172000 12363000 3938 1402 4241 8907;8908;8909;8910 7411;7412;7413;7414 7411 1892 4 YGMGTSVER IFICENNRYGMGTSVE GMGTSVERAAASTDYY R Y G E R A 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 1 1 0 1 1 0 0 9 0 998.44913 P08559 P08559 227 235 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.0018026 115.91 By MS/MS By MS/MS 2 2 127480000 54697000 72780000 3939 1239 4242;4243 8911;8912;8913;8914 7415;7416;7417;7418;7419;7420;7421;7422 7417 152 1636;3643 8 YGNIIAYDHSR DQNRAKNRYGNIIAYD IIAYDHSRVILQPVED R Y G S R V 1 1 1 1 0 0 0 1 1 2 0 0 0 0 0 1 0 0 2 0 0 0 11 0 1307.6258 H0Y6V4;A0A0G2JQF6;H0Y6P5;Q5TG12;E9PGC5;Q15262;E7EPS8;P28827 H0Y6V4 176 186 PTPRK;PTPRM Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase kappa;Receptor-type tyrosine-protein phosphatase mu yes no 2 0.017942 50.353 By MS/MS By MS/MS 1 1 752620 0 752620 3940 249 4244 8915;8916 7423;7424 7423 4047 2 YGQFSGLNPGGR PADKNKGKYGQFSGLN SGLNPGGRPITPPRNS K Y G G R P 0 1 1 0 0 1 0 4 0 0 1 0 0 1 1 1 0 0 1 0 0 0 12 0 1251.5996 P62136 P62136 306 317 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 2 0.0088126 60.167 By MS/MS By MS/MS 1 1 1752100 0 1752100 3941 1426 4245 8917;8918 7425;7426 7425 4323 2 YGQFSGLNPGGRPITPPR PADKNKGKYGQFSGLN GRPITPPRNSAKAKK_ K Y G P R N 0 2 1 0 0 1 0 4 0 1 1 0 0 1 4 1 1 0 1 0 0 0 18 1 1912.9908 P62136 P62136 306 323 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 3 0.0070435 53.169 By MS/MS By MS/MS 1 1 3679100 2011000 1668000 3942 1426 4246 8919;8920 7427;7428 7427 4323 2 YGSKNTDQGVYLGLSK ________________ GVYLGLSKTQVLSPAT R Y G S K T 0 0 1 1 0 1 0 3 0 0 2 2 0 0 0 2 1 0 2 1 0 0 16 1 1728.8683 E9PP18;E9PRW9;E9PNU4;Q13190 E9PP18 7 22 STX5 Syntaxin-5 yes no 2 0.015417 58.159 By MS/MS By matching 1 1 3786400 1382600 2403700 3943 673 4247 8921;8922 7429 7429 911 1 YHELPTLEER CTEQEMPRYHELPTLE ELPTLEERSGPLHPGA R Y H E R S 0 1 0 0 0 0 3 0 1 0 2 0 0 0 1 0 1 0 1 0 0 0 10 0 1285.6303 Q92692 Q92692 454 463 PVRL2 Nectin-2 yes yes 2 0.010026 56.632 By matching By MS/MS 1 1 3505000 1555400 1949600 3944 1858 4248 8923;8924 7430 7430 4410 1 YHGHSMSDPGVSYR LMELQTYRYHGHSMSD SDPGVSYRTREEIQEV R Y H Y R T 0 1 0 1 0 0 0 2 2 0 0 0 1 0 1 3 0 0 2 1 0 0 14 0 1591.6838 P08559;Q5JPU3;P29803 P08559 289 302 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 2;3 1.0524E-14 124.68 By MS/MS By MS/MS 8 8 306110000 156420000 149680000 3945 1239 4249;4250;4251;4252 8925;8926;8927;8928;8929;8930;8931;8932;8933;8934;8935;8936;8937;8938;8939;8940 7431;7432;7433;7434;7435;7436;7437;7438;7439;7440;7441;7442 7436 153 1637;1638;1639 12 YHIGDEILVSGGIGALVR KELANILKYHIGDEIL GGIGALVRLKSLQGDK K Y H V R L 1 1 0 1 0 0 1 4 1 3 2 0 0 0 0 1 0 0 1 2 0 0 18 0 1868.0156 H0Y8L3;Q15582 H0Y8L3 289 306 TGFBI Transforming growth factor-beta-induced protein ig-h3 yes no 3 0.0036372 50.188 By matching By MS/MS 1 1 2162900 1249900 912960 3946 853 4253 8941;8942 7443 7443 1 YIDQEELNK KTKKIKEKYIDQEELN IDQEELNKTKPIWTRN K Y I N K T 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1150.5506 P08238;Q58FF8;P07900;Q14568 P08238 276 284 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 no no 2 0.0018721 107.29 By MS/MS By MS/MS 1 1 5600300 2070700 3529500 3947 1237;1234 4254 8943;8944 7444;7445 7444 2 YIEIDSDEEPR PGKSQKRKYIEIDSDE IDSDEEPRGELLSLRD K Y I P R G 0 1 0 2 0 0 3 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 11 0 1364.6096 E7EW05;Q9NVU7 E7EW05 543 553 SDAD1 Protein SDA1 homolog yes no 2 0.0037481 78.324 By MS/MS By MS/MS 1 1 2886300 1212800 1673500 3948 599 4255 8945;8946 7446;7447 7447 823 2 YIENRDVAKTVLK SKLYRFFKYIENRDVA DVAKTVLKERGLKNIR K Y I L K E 1 1 1 1 0 0 1 0 0 1 1 2 0 0 0 0 1 0 1 2 0 0 13 2 1547.8671 Q7Z5Y7 Q7Z5Y7 298 310 KCTD20 BTB/POZ domain-containing protein KCTD20 yes yes 2 0.020455 41.227 By MS/MS 1 0 0 0 3949 1719 4256 8947 7448 7448 236 3834;4382 1 YIMKQLNSTRK ENIKLPLKYIMKQLNS KQLNSTRKIGRSAIT_ K Y I R K I 0 1 1 0 0 1 0 0 0 1 1 2 1 0 0 1 1 0 1 0 0 0 11 2 1380.7548 H3BUU1 H3BUU1 86 96 BBS4 yes yes 2 0.016811 48.796 By MS/MS 1 0 0 0 3950 936 4257 8948 7449 7449 1259;3535;4201 1 YIQVSTGAYK MDFSADGKYIQVSTGA QVSTGAYKRQVHEVPL K Y I Y K R 1 0 0 0 0 1 0 1 0 1 0 1 0 0 0 1 1 0 2 1 0 0 10 0 1128.5815 Q6ZMW3 Q6ZMW3 1829 1838 EML6 Echinoderm microtubule-associated protein-like 6 yes yes 2 0.015958 41.427 By MS/MS 1 647270 0 647270 3951 1696 4258 8949 7450 7450 2369;4379 1 YISITVPSK LKFNNSRKYISITVPS ISITVPSKTQTMSPHI K Y I S K T 0 0 0 0 0 0 0 0 0 2 0 1 0 0 1 2 1 0 1 1 0 0 9 0 1006.5699 Q9H1N7 Q9H1N7 43 51 SLC35B3 Adenosine 3-phospho 5-phosphosulfate transporter 2 yes yes 2 0.0047521 78.264 By MS/MS 1 324750 0 324750 3952 1994 4259 8950 7451 7451 4434 1 YKDIIRQPSEEEIIK TRIPSAKKYKDIIRQP PSEEEIIKLAPPPKKA K Y K I K L 0 1 0 1 0 1 3 0 0 4 0 2 0 0 1 1 0 0 1 0 0 0 15 2 1859.9993 B1AKZ5;Q15121 B1AKZ5 86 100 PEA15 Astrocytic phosphoprotein PEA-15 yes no 3 0.0024795 70.373 By matching By MS/MS 1 1 6323800 2288400 4035400 3953 359 4260 8951;8952 7452 7452 526 1 YLAEFATGNDR KMKGDYHRYLAEFATG EFATGNDRKEAAENSL R Y L D R K 2 1 1 1 0 0 1 1 0 0 1 0 0 1 0 0 1 0 1 0 0 0 11 0 1255.5833 P62258;K7EM20 P62258 131 141 YWHAE 14-3-3 protein epsilon yes no 2 0.0098359 66.435 By MS/MS 1 640920 640920 0 3954 1428 4261 8953 7453 7453 1 YLAEVACGDDR KMKGDYFRYLAEVACG EVACGDDRKQTIDNSQ R Y L D R K 2 1 0 2 1 0 1 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1267.5503 E9PG15;P27348 E9PG15 128 138 YWHAQ 14-3-3 protein theta yes no 2 0.0072848 71.349 By matching By MS/MS 1 1 1912200 610070 1302200 3955 629 4262 8954;8955 7454 7454 1 YLCEGTESPYQTGQLHPAIR SRLLDVPRYLCEGTES GQLHPAIRVADLLQHI R Y L I R V 1 1 0 0 1 2 2 2 1 1 2 0 0 0 2 1 2 0 2 0 0 0 20 0 2319.0954 H0Y6V4;A0A0G2JQF6;H0Y6P5;Q5TG12;E9PGC5;Q15262 H0Y6V4 109 128 PTPRK Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase kappa yes no 3 6.7305E-07 96.208 By MS/MS By MS/MS 1 1 5961700 2583000 3378700 3956 249 4263 8956;8957 7455;7456;7457 7455 4048 3 YLEESDEDDLF VRAKKPIKYLEESDED ESDEDDLF________ K Y L L F - 0 0 0 3 0 0 3 0 0 0 2 0 0 1 0 1 0 0 1 0 0 0 11 0 1373.5511 P11388;J3QR57 P11388 1521 1531 TOP2A DNA topoisomerase 2-alpha yes no 2 5.0978E-10 134.84 By MS/MS By MS/MS 1 1 46543000 17979000 28564000 3957 1258 4264 8958;8959 7458;7459 7458 1662 2 YLEIDLSMK KCTEALSKYLEIDLSM LEIDLSMKNNNQHTDL K Y L M K N 0 0 0 1 0 0 1 0 0 1 2 1 1 0 0 1 0 0 1 0 0 0 9 0 1110.5631 Q15916 Q15916 126 134 ZBTB6 Zinc finger and BTB domain-containing protein 6 yes yes 2 0.017657 52.403 By matching By MS/MS 1 1 1458100 926890 531250 3958 1571 4265 8960;8961 7460 7460 4362 1 YLELLERTSR KTVVSHPRYLELLERT ELLERTSRPLKILRHQ R Y L S R P 0 2 0 0 0 0 2 0 0 0 3 0 0 0 0 1 1 0 1 0 0 0 10 1 1278.6932 I3L2B0;K7EIG1;O75153 I3L2B0 555 564 CLUH Clustered mitochondria protein homolog yes no 2 0.014398 44.564 By MS/MS 1 0 0 0 3959 987 4266 8962 7461 7461 1324;3555;4209 1 YLGNATAIFFLPDEGK SSWVLLMKYLGNATAI FFLPDEGKLQHLENEL K Y L G K L 2 0 1 1 0 0 1 2 0 1 2 1 0 2 1 0 1 0 1 0 0 0 16 0 1754.8879 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 268 283 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 4.1749E-46 147.7 By MS/MS By MS/MS 1 1 18464000 5905500 12558000 3960 1 4267 8963;8964 7462;7463 7463 2 2 YLGSPITTVPK NLVDSEMKYLGSPITT SPITTVPKLDKNPNLG K Y L P K L 0 0 0 0 0 0 0 1 0 1 1 1 0 0 2 1 2 0 1 1 0 0 11 0 1174.6598 D6RJC2;P30307 D6RJC2 165 175 CDC25C M-phase inducer phosphatase 3 yes no 2 0.0083294 64.827 By MS/MS By matching 1 1 2610500 1247400 1363100 3961 544 4268 8965;8966 7464 7464 725 1 YLHPEGLPSDYTISFLFR ALVSQPTRYLHPEGLP YTISFLFRILPDTPQE R Y L F R I 0 1 0 1 0 0 1 1 1 1 3 0 0 2 2 2 1 0 2 0 0 0 18 0 2154.0786 Q05707;A0A0A0MQT7 Q05707 1276 1293 COL14A1 Collagen alpha-1(XIV) chain yes no 3 1.554E-47 140.22 By MS/MS By MS/MS 1 1 10877000 4818300 6059000 3962 1466 4269 8967;8968 7465;7466 7466 2 YLLGDAPVSPSSQK HLRGQEHKYLLGDAPV PVSPSSQKLKRKAEED K Y L Q K L 1 0 0 1 0 1 0 1 0 0 2 1 0 0 2 3 0 0 1 1 0 0 14 0 1460.7511 Q9NYB0;H3BMI8 Q9NYB0 195 208 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes no 2 5.8313E-18 133.25 By MS/MS By MS/MS 1 1 65173000 34184000 30989000 3963 2071 4270 8969;8970 7467;7468 7467 2961 2 YLQIIFLHSNSIAR PSGLPELKYLQIIFLH LHSNSIARVGVNDFCP K Y L A R V 1 1 1 0 0 1 0 0 1 3 2 0 0 1 0 2 0 0 1 0 0 0 14 0 1673.9253 Q9BXN1 Q9BXN1 313 326 ASPN Asporin yes yes 3 0.0081173 57.434 By MS/MS By matching 1 1 618770 271680 347090 3964 1974 4271 8971;8972 7469 7469 1 YLTEQSGHMDNRQSLLSFFQKR DSIAMKIRYLTEQSGH LLSFFQKRIYKNLHIF R Y L K R I 0 2 1 1 0 3 1 1 1 0 3 1 1 2 0 3 1 0 1 0 0 0 22 2 2684.3129 H7BXS7;Q0VDD8 H7BXS7 562 583 DNAH14 Dynein heavy chain 14, axonemal yes no 3 0.007056 41.912 By matching By MS/MS 1 1 6447900 3312300 3135600 3965 940 4272 8973;8974 7470 7470 394 112 1266;1267;3536;4203 1 YLTLNTESTR VFKSTEQKYLTLNTES TLNTESTRIMTKLRAQ K Y L T R I 0 1 1 0 0 0 1 0 0 0 2 0 0 0 0 1 3 0 1 0 0 0 10 0 1196.6037 H7C4Y0;H0Y885;F8WF14;P06276 H7C4Y0 58 67 BCHE Carboxylic ester hydrolase;Cholinesterase yes no 2 0.012705 51.979 By MS/MS 1 614120 0 614120 3966 773 4273 8975 7471 7471 115 1030;4170 0 YMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKK DDQEAYFRYMAENPTA NPIAPTKKIIDPLPPI R Y M K K I 3 0 3 3 0 1 6 2 0 1 1 2 1 0 3 1 2 0 2 2 0 0 33 1 3652.6363 J3KRE3;A0A0A0MSJ0;Q86XP3 J3KRE3 51 83 DDX42 ATP-dependent RNA helicase DDX42 yes no 3 0.0036881 40.544 By MS/MS 1 10423000 0 10423000 3967 161 4274 8976 7472 7472 218 1 YMEDSTYYK LGDFGLSRYMEDSTYY MEDSTYYKASKGKLPI R Y M Y K A 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 1 0 3 0 0 0 9 0 1198.4852 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397 E9PEI4 198 206 PTK2 Focal adhesion kinase 1 yes no 2 0.0099216 84.498 By MS/MS By MS/MS 1 1 2019900 743900 1276000 3968 582 4275 8977;8978 7473;7474 7473 778;4141;4142 1 YMLGTNHQLTVK DAPGREQKYMLGTNHQ TNHQLTVKSLRASLLD K Y M V K S 0 0 1 0 0 1 0 1 1 0 2 1 1 0 0 0 2 0 1 1 0 0 12 0 1403.7231 Q9Y3R5 Q9Y3R5 218 229 DOPEY2 Protein dopey-2 yes yes 2 0.0019854 72.607 By MS/MS 1 1141400 1141400 0 3969 2154 4276 8979 7475 7475 327;464 3977 1 YMLTHQELASDGEIETK KALAKCEKYMLTHQEL SDGEIETKLIKGDIYK K Y M T K L 1 0 0 1 0 1 3 1 1 1 2 1 1 0 0 1 2 0 1 0 0 0 17 0 1963.9197 H7BYN4;Q02241 H7BYN4 851 867 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 2;3 0.00040995 90.729 By MS/MS By MS/MS 2 3 7418400 2964500 4453800 3970 943 4277;4278 8980;8981;8982;8983;8984 7476;7477;7478 7478 113 1270 3 YMNSDTTSPELR RWSDYVERYMNSDTTS DTTSPELREHLAQKPV R Y M L R E 0 1 1 1 0 0 1 0 0 0 1 0 1 0 1 2 2 0 1 0 0 0 12 0 1412.6242 Q96ST3 Q96ST3 1105 1116 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 4.1183E-06 74.133 By matching By MS/MS 2 2 12952000 6245600 6706300 3971 1931 4279;4280 8985;8986;8987;8988 7479;7480 7480 280 2733;3897 1 YNDWSDDDDDSNESK AGDCSGARYNDWSDDD DDDSNESKSIVWYPPW R Y N S K S 0 0 2 6 0 0 1 0 0 0 0 1 0 0 0 3 0 1 1 0 0 0 15 0 1803.6344 H3BV87;Q9UH62 H3BV87 57 71 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes no 2 0.0029269 67.385 By MS/MS 1 0 0 0 3972 937 4281 8989 7481 7481 1260 1 YNKEMSKR WFCKTRKKYNKEMSKR YNKEMSKRKHKKKHMR K Y N K R K 0 1 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 1 0 0 0 8 2 1054.523 Q7Z5D8 Q7Z5D8 157 164 NANOGNB NANOG neighbor homeobox yes yes 2 0.015645 43.651 By MS/MS 1 0 0 0 3973 1716 4282 8990 7482 7482 235 252 2409;4381 1 YNLDASEEEDSNK EDDADLSKYNLDASEE SEEEDSNKKKSNRRSR K Y N N K K 1 0 2 2 0 0 3 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 13 0 1512.6216 O95218 O95218 183 195 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.0021166 72.898 By matching By MS/MS 1 1 6490900 2690000 3800900 3974 1183 4283 8991;8992 7483 7483 1578 1 YNTEGRVSPSPSQESLSSSK YFNNMRMKYNTEGRVS QESLSSSKSDTDTGVC K Y N S K S 0 1 1 0 0 1 2 1 0 0 1 1 0 0 2 7 1 0 1 1 0 0 20 1 2139.008 Q5JSH3;H7BY83 Q5JSH3 554 573 WDR44 WD repeat-containing protein 44 yes no 3 0.0057223 52.866 By matching By MS/MS 1 1 3918500 1773900 2144600 3975 1606 4284 8993;8994 7484 7484 2229 1 YPHSVAK WKIANETRYPHSVAKS RYPHSVAKSQCLENSL R Y P A K S 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 1 0 0 1 1 0 0 7 0 800.41809 P08236 P08236 635 641 GUSB Beta-glucuronidase yes yes 2 0.012169 61.679 By matching By MS/MS 1 1 1180300 461610 718690 3976 1236 4285 8995;8996 7485 7485 1631;4263 1 YPPTVMQNK YHEECVQKYPPTVMQN PPTVMQNKGFRCSLHI K Y P N K G 0 0 1 0 0 1 0 0 0 0 0 1 1 0 2 0 1 0 1 1 0 0 9 0 1076.5325 Q96L73 Q96L73 1623 1631 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes yes 2 0.01791 42.109 By MS/MS 1 0 0 0 3977 1905 4286 8997 7486 7486 263 3889;4420 1 YPPVTPSPPCQSKYPPKSK PPQQCQQKYPPVTPSP SKYPPKSK________ K Y P S K - 0 0 0 0 1 1 0 0 0 0 0 3 0 0 7 3 1 0 2 1 0 0 19 2 2157.0929 P35326 P35326 54 72 SPRR2A Small proline-rich protein 2A yes yes 3 0.0098695 41.359 By MS/MS By matching 1 1 10565000 5872600 4692800 3978 1339 4287 8998;8999 7487 7487 411 1762;3680;4285 1 YPSSISSSPQK QRSTQTRRYPSSISSS SISSSPQKDLTQAKNG R Y P Q K D 0 0 0 0 0 1 0 0 0 1 0 1 0 0 2 5 0 0 1 0 0 0 11 0 1179.5772 F8W726;Q14157 F8W726 613 623 UBAP2L Ubiquitin-associated protein 2-like yes no 2 0.0026234 83.783 By MS/MS By MS/MS 1 1 13583000 6888800 6694600 3979 754 4288 9000;9001 7488;7489 7489 1002;1003;1004;1005 2 YQESPGIQMK SDTPNPEKYQESPGIQ ESPGIQMKTRLKEGAS K Y Q M K T 0 0 0 0 0 2 1 1 0 1 0 1 1 0 1 1 0 0 1 0 0 0 10 0 1179.5594 E9PJ60;Q9UHI6 E9PJ60 319 328 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.0063168 76.221 By MS/MS By MS/MS 1 1 3219900 1484400 1735500 3980 646 4289 9002;9003 7490;7491 7490 875 2 YQEVWTSSTSPR FQKSSAIRYQEVWTSS WTSSTSPRQKIPKVEL R Y Q P R Q 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 3 2 1 1 1 0 0 12 0 1439.6681 H0YN99;Q9H792;H3BUZ5 H0YN99 531 542 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.020268 51.276 By MS/MS 1 0 0 0 3981 900 4290 9004 7492 7492 4194 1 YQINNISTVPK SIHAEKPKYQINNIST NNISTVPKAIPVSPSA K Y Q P K A 0 0 2 0 0 1 0 0 0 2 0 1 0 0 1 1 1 0 1 1 0 0 11 0 1275.6823 A0A087X0K9;G5E9E7;G3V1L9;Q07157;H0Y3R8 A0A087X0K9 1510 1520 TJP1 Tight junction protein ZO-1 yes no 3 0.0083251 57.785 By MS/MS By matching 1 1 1935200 1041300 893890 3982 100 4291 9005;9006 7493 7493 17 134 1 YQPDQETK SICVLILRYQPDQETK YQPDQETKTGEEVELQ R Y Q T K T 0 0 0 1 0 2 1 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 8 0 1007.456 Q8WY07 Q8WY07 430 437 SLC7A3 Cationic amino acid transporter 3 yes yes 2 0.019914 50.703 By MS/MS 1 0 0 0 3983 1842 4292 9007 7494 7494 3871;4403 1 YQPLASTASDNDFVTPEPR KKPSTGSRYQPLASTA DFVTPEPRRTTRRHPN R Y Q P R R 2 1 1 2 0 1 1 0 0 0 1 0 0 1 3 2 2 0 1 1 0 0 19 0 2106.9858 Q15021 Q15021 1325 1343 NCAPD2 Condensin complex subunit 1 yes yes 2 1.2012E-15 111.45 By MS/MS By MS/MS 1 2 32191000 16347000 15844000 3984 1534 4293 9008;9009;9010 7495;7496 7496 2115 2 YQQPFEDFR REGSFESRYQQPFEDF QQPFEDFRISQEHLAD R Y Q F R I 0 1 0 1 0 2 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 9 0 1228.5513 P19174;V9GY71;V9GYH5 P19174 1253 1261 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 2 0.00048286 101.43 By MS/MS By MS/MS 1 1 13411000 6868900 6541700 3985 1293 4294 9011;9012 7497;7498;7499;7500 7500 4274 4 YRPSMEGYR RVTRIEERYRPSMEGY RPSMEGYRAPSRQDVY R Y R Y R A 0 2 0 0 0 0 1 1 0 0 0 0 1 0 1 1 0 0 2 0 0 0 9 1 1157.5288 C9JZR2;O60716;E9PRE2 C9JZR2 241 249 CTNND1 Catenin delta-1 yes no 2 0.011355 75.043 By MS/MS 1 462610 0 462610 3986 495 4295 9013 7501 7501 4125 1 YRSDIHTEAVQAALAK SGGARDERYRSDIHTE AVQAALAKHKEQKMAL R Y R A K H 4 1 0 1 0 1 1 0 1 1 1 1 0 0 0 1 1 0 1 1 0 0 16 1 1771.9217 Q9P265 Q9P265 98 113 DIP2B Disco-interacting protein 2 homolog B yes yes 3 0.00072368 76.311 By MS/MS By MS/MS 1 1 5221700 2551500 2670100 3987 2087 4296 9014;9015 7502;7503 7502 4452 2 YRSPEPDPYLSYR ________________ PDPYLSYRWKRRRSYS R Y R Y R W 0 2 0 1 0 0 1 0 0 0 1 0 0 0 3 2 0 0 3 0 0 0 13 1 1641.7787 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761 H3BRT8 7 19 CLK3 Dual specificity protein kinase CLK3 yes no 3 0.0043327 62.081 By MS/MS By MS/MS 1 1 4353900 2304300 2049600 3988 919 4297 9016;9017 7504;7505 7505 1230 2 YRSPYSGPK RDRRFRGRYRSPYSGP RSPYSGPKFNSAIRGK R Y R P K F 0 1 0 0 0 0 0 1 0 0 0 1 0 0 2 2 0 0 2 0 0 0 9 1 1053.5243 Q5QP22;Q5QP23;G3XAC6;Q14498 Q5QP22 95 103 RBM39 RNA-binding protein 39 yes no 2;3 0.0015775 130.44 By MS/MS By MS/MS 2 2 87604000 46641000 40963000 3989 803 4298 9018;9019;9020;9021 7506;7507;7508;7509;7510 7510 1066 5 YSGAYGASVSDEELK PSGSKSQRYSGAYGAS SVSDEELKRRVAEELA R Y S L K R 2 0 0 1 0 0 2 2 0 0 1 1 0 0 0 3 0 0 2 1 0 0 15 0 1574.71 C9JRZ6;F8WAR4;Q9NX63 C9JRZ6 49 63 CHCHD3 MICOS complex subunit MIC19 yes no 2 0.0038114 62.377 By MS/MS 1 760590 0 760590 3990 477 4299 9022 7511 7511 666 1 YSHDFNFHINYGDLGFLGPEDLR RKVITFNRYSHDFNFH FLGPEDLRVFGSQNLT R Y S L R V 0 1 2 3 0 0 1 3 2 1 3 0 0 3 1 1 0 0 2 0 0 0 23 0 2725.2561 E9PJ21;A0A087WWI4;K7EQK2;A0A087X054;Q9Y4L1 E9PJ21 487 509 HYOU1 Hypoxia up-regulated protein 1 yes no 4 8.9816E-05 69.398 By MS/MS By MS/MS 1 1 5017000 1964500 3052500 3991 63 4300 9023;9024 7512;7513 7512 2 YSHVSQHSPSKK PSVVGLARYSHVSQHS SQHSPSKKALYNKHLP R Y S K K A 0 0 0 0 0 1 0 0 2 0 0 2 0 0 1 4 0 0 1 1 0 0 12 1 1383.6895 Q14690 Q14690 1353 1364 PDCD11 Protein RRP5 homolog yes yes 3 0.0045127 58.079 By MS/MS 1 3800000 0 3800000 3992 1527 4301 9025 7514 7514 2103 1 YSLQSANASSLSSGQLKSPSLSQSQASR QRSQAPARYSLQSANA LSQSQASRVLGQSSSK R Y S S R V 3 1 1 0 0 4 0 1 0 0 4 1 0 0 1 11 0 0 1 0 0 0 28 1 2868.4213 Q9H2P0 Q9H2P0 392 419 ADNP Activity-dependent neuroprotector homeobox protein yes yes 3 0.010303 41.423 By MS/MS By matching 1 1 17521000 11942000 5579300 3993 2000 4302 9026;9027 7515 7515 2860;2861 1 YSPSQNSPIHHIPSR SVGNGSSRYSPSQNSP PIHHIPSRRSPAKTIA R Y S S R R 0 1 1 0 0 1 0 0 2 2 0 0 0 0 3 4 0 0 1 0 0 0 15 0 1718.8489 Q9NYF8;E9PK91;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00 Q9NYF8 284 298 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0019024 62.916 By MS/MS By MS/MS 2 3 32051000 6255100 25796000 3994 2073 4303;4304 9028;9029;9030;9031;9032 7516;7517;7518;7519;7520 7519 2975;2976;2977 5 YSPTSPTYSPTSPK VYTPTSPKYSPTSPTY TYSPTSPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 4 3 0 2 0 0 0 14 0 1511.7144 P24928 P24928 1909 1922 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 2 0.00096045 75.445 By MS/MS By MS/MS 2 2 15263000 6980200 8282500 3995 1310 4305;4306 9033;9034;9035;9036 7521;7522;7523 7522 1723;1724;1725 3 YSPTSPTYSPTTPK KYSPTSPKYSPTSPTY TYSPTTPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 3 4 0 2 0 0 0 14 0 1525.73 P24928 P24928 1874 1887 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 5.9156E-10 113.61 By MS/MS By MS/MS 2 2 14933000 8048100 6884500 3996 1310 4307;4308 9037;9038;9039;9040 7524;7525;7526 7524 1726;1727;3669 3 YSSGGNFETPSK VDDFRQPRYSSGGNFE GNFETPSKRAPAKGRA R Y S S K R 0 0 1 0 0 0 1 2 0 0 0 1 0 1 1 3 1 0 1 0 0 0 12 0 1272.5622 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 368 379 OCLN Occludin yes no 2 0.00061354 93.839 By MS/MS By MS/MS 1 1 4741300 2475200 2266100 3997 248 4309 9041;9042 7527;7528 7527 4046 2 YSSLNLFDTYK AKGKDGKKYSSLNLFD LNLFDTYKGKSLEIQK K Y S Y K G 0 0 1 1 0 0 0 0 0 0 2 1 0 1 0 2 1 0 2 0 0 0 11 0 1349.6503 P48634 P48634 17 27 PRRC2A Protein PRRC2A yes yes 2 0.0067042 59.426 By MS/MS 1 194190 0 194190 3998 1373 4310 9043 7529 7529 4311 1 YSSPHQSLLSIR NRLTYEKRYSSPHQSL HQSLLSIRGSLFSPRR R Y S I R G 0 1 0 0 0 1 0 0 1 1 2 0 0 0 1 4 0 0 1 0 0 0 12 0 1386.7256 A0A1B0GUX7;A0A1B0GVX7;P35498 A0A1B0GUX7 549 560 SCN1A Sodium channel protein type 1 subunit alpha yes no 2 0.0079169 57.532 By MS/MS 1 0 0 0 3999 295 4311 9044 7530 7530 351 423;4058 1 YSSSGSPANSFHFK SNLTKSERYSSSGSPA PANSFHFKEAWKHAIQ R Y S F K E 1 0 1 0 0 0 0 1 1 0 0 1 0 2 1 5 0 0 1 0 0 0 14 0 1514.679 H3BRH4;O00418 H3BRH4 69 82 EEF2K Eukaryotic elongation factor 2 kinase yes no 2 0.016827 49.35 By MS/MS By matching 1 1 3474800 1579000 1895800 4000 926 4312 9045;9046 7531 7531 1237;1238;1239 0 YSTLHTQSAEPPPPPEPAR VCEEPQVKYSTLHTQS PPPPEPARI_______ K Y S A R I 2 1 0 0 0 1 2 0 1 0 1 0 0 0 6 2 2 0 1 0 0 0 19 0 2074.012 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 176 CD99L2 CD99 antigen-like protein 2 yes no 3 0.0034967 78.848 By MS/MS By matching 1 1 3589800 1543600 2046300 4001 266 4313 9047;9048 7532 7532 3307;3308;4051 1 YSTLHTQSAEPPPPPEPARI VCEEPQVKYSTLHTQS PPPEPARI________ K Y S R I - 2 1 0 0 0 1 2 0 1 1 1 0 0 0 6 2 2 0 1 0 0 0 20 1 2187.096 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 177 CD99L2 CD99 antigen-like protein 2 yes no 3 0.00064733 86.222 By MS/MS By MS/MS 1 1 18321000 9296200 9024900 4002 266 4314 9049;9050 7533;7534;7535 7533 3307;3308;4051 3 YSVGSLSPVSASVLK TPKKKRIKYSVGSLSP PVSASVLKKTEQKEKV K Y S L K K 1 0 0 0 0 0 0 1 0 0 2 1 0 0 1 5 0 0 1 3 0 0 15 0 1492.8137 Q9UBU7 Q9UBU7 353 367 DBF4 Protein DBF4 homolog A yes yes 2 0.013494 53.395 By MS/MS By matching 1 1 1853500 917890 935600 4003 2094 4315 9051;9052 7536 7536 3000 1 YSVQLLTPANLLAK IGTKTTLRYSVQLLTP TPANLLAKINGKDSIE R Y S A K I 2 0 1 0 0 1 0 0 0 0 4 1 0 0 1 1 1 0 1 1 0 0 14 0 1529.8817 H7C4G5;Q9Y265 H7C4G5 216 229 RUVBL1 RuvB-like 1 yes no 2 0.016697 67.234 By matching By MS/MS 1 1 30106000 11451000 18656000 4004 969 4316 9053;9054 7537 7537 137 1299;4207 1 YTEFYHVPTHSDASK PRKHIVERYTEFYHVP PTHSDASKKRLIEDTE R Y T S K K 1 0 0 1 0 0 1 0 2 0 0 1 0 1 1 2 2 0 2 1 0 0 15 0 1780.8057 H0YBI4;Q96HC4 H0YBI4 106 120 PDLIM5 PDZ and LIM domain protein 5 yes no 3 0.0010463 61.657 By MS/MS By MS/MS 2 2 16288000 9207700 7080700 4005 866 4317 9055;9056;9057;9058 7538;7539 7539 4184;4185 2 YTFAPSVSLNK APAADPPRYTFAPSVS APSVSLNKTARPFGAP R Y T N K T 1 0 1 0 0 0 0 0 0 0 1 1 0 1 1 2 1 0 1 1 0 0 11 0 1225.6343 D6RF83;H7BYK4;D6RH06;Q9NR12 D6RF83 104 114 PDLIM7 PDZ and LIM domain protein 7 yes no 2 0.0019569 76.679 By MS/MS By MS/MS 1 1 1809600 624340 1185300 4006 535 4318 9059;9060 7540;7541 7540 4136 2 YTGEEDGAGGHSPAPPQTEECLR GPPMAPEKYTGEEDGA PQTEECLRERPSTCPP K Y T L R E 2 1 0 1 1 1 4 4 1 0 1 0 0 0 3 1 2 0 1 0 0 0 23 0 2457.0503 J3KSV9;J3KS37;O94762 J3KSV9 29 51 RECQL5 ATP-dependent DNA helicase Q5 yes no 3 0.014441 42.348 By MS/MS By MS/MS 1 1 3628700 1846400 1782300 4007 1016 4319 9061;9062 7542;7543;7544 7544 1353 3 YVDEENSDGETSNHR VILEKAGKYVDEENSD DGETSNHRLQETSSQS K Y V H R L 0 1 2 2 0 0 3 1 1 0 0 0 0 0 0 2 1 0 1 1 0 0 15 0 1750.703 H0YFD2;F8WFC1;Q8N9T8;H0YH26 H0YFD2 74 88 KRI1 Protein KRI1 homolog yes no 2 0.0001169 83.106 By MS/MS By MS/MS 2 3 9610500 3421100 6189400 4008 775 4320 9063;9064;9065;9066;9067 7545;7546;7547;7548;7549;7550 7546 1035 6 YVDSEGHLYTVPIR ________________ HLYTVPIREQGNIYKP K Y V I R E 0 1 0 1 0 0 1 1 1 1 1 0 0 0 1 1 1 0 2 2 0 0 14 0 1647.8257 Q03135 Q03135 6 19 CAV1 Caveolin-1 yes yes 2;3 0.00023016 75.416 By MS/MS By MS/MS 2 2 7948600 3218200 4730400 4009 1458 4321 9068;9069;9070;9071 7551;7552;7553 7552 3728;4328 3 YVGFGNTPPPQKK YQGAQGNRYVGFGNTP NTPPPQKKEDDFLNNA R Y V K K E 0 0 1 0 0 1 0 2 0 0 0 2 0 1 3 0 1 0 1 1 0 0 13 1 1431.751 E5RHT6;E5RHC5;F8W1U7;F8VWH9;Q8N6T3 E5RHT6 109 121 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 yes no 2 0.017589 67.115 By matching By MS/MS 1 1 2749500 971190 1778300 4010 552 4322 9072;9073 7554 7554 3399 1 YVLINWVGEDVPDAR DSQAALPKYVLINWVG GEDVPDARKCACASHV K Y V A R K 1 1 1 2 0 0 1 1 0 1 1 0 0 0 1 0 0 1 1 3 0 0 15 0 1744.8784 Q16643;D6R9W4;D6RCR4;D6RFI1 Q16643 80 94 DBN1 Drebrin yes no 2 0.00030767 78.692 By MS/MS By matching 1 1 1562000 884110 677850 4011 1574 4323 9074;9075 7555 7555 1 YVPLADVK FSSKYVPKYVPLADVK YVPLADVKSEKTKKGR K Y V V K S 1 0 0 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 2 0 0 8 0 903.50657 G5E972;P42167;H0YJH7 G5E972 354 361 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2 0.011733 68.787 By matching By MS/MS 1 1 1839100 815280 1023800 4012 808 4324 9076;9077 7556 7556 4173 1 YVSGSSPDLVTR DLASHRHKYVSGSSPD SSPDLVTRKVQLSVKT K Y V T R K 0 1 0 1 0 0 0 1 0 0 1 0 0 0 1 3 1 0 1 2 0 0 12 0 1279.6408 Q15678 Q15678 589 600 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 0.017502 55.776 By matching By MS/MS 1 1 4857800 2454400 2403400 4013 1564 4325 9078;9079 7557 7557 2161 1 YYDGWLICEEPTCRNRTR DIRRFIKKYYDGWLIC PTCRNRTRHLPLQFSR K Y Y T R H 0 3 1 1 2 0 2 1 0 1 1 0 0 0 1 0 2 1 2 0 0 0 18 2 2388.0739 A0A087WU64;A6NMQ1;P09884 A0A087WU64 1340 1357 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit yes no 3 0.00088749 63.998 By MS/MS 1 23133000 23133000 0 4014 36 4326 9080 7558 7558 8 3216;4002;4003 1 YYEGYYAAGPGYGGR GYAPNQGRYYEGYYAA AGPGYGGRNDSDPTYG R Y Y G R N 2 1 0 0 0 0 1 5 0 0 0 0 0 0 1 0 0 0 5 0 0 0 15 0 1642.7052 A0A087WZF1;Q93052;C9JXK9;C9JUT4 A0A087WZF1 274 288 LPP Lipoma-preferred partner yes no 2 0.0037924 57.347 By matching By MS/MS 1 1 1285000 556260 728730 4015 90 4327 9081;9082 7559 7559 4016 1 YYLAPKIEDEEGS IADMGHLKYYLAPKIE KIEDEEGS________ K Y Y G S - 1 0 0 1 0 0 3 1 0 1 1 1 0 0 1 1 0 0 2 0 0 0 13 1 1512.6984 P12004 P12004 249 261 PCNA Proliferating cell nuclear antigen yes yes 2 0.012729 68.676 By MS/MS By matching 1 1 1880900 1049500 831410 4016 1262 4328 9083;9084 7560 7560 1668 0 YYSDSDDELTVEQR HKPYLYSKYYSDSDDE DELTVEQRRQSIAKEK K Y Y Q R R 0 1 0 3 0 1 2 0 0 0 1 0 0 0 0 2 1 0 2 1 0 0 14 0 1718.7271 Q8NFC6 Q8NFC6 480 493 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.0048476 64.798 By MS/MS By MS/MS 1 1 4256700 2255000 2001700 4017 1803 4329 9085;9086 7561;7562 7562 2541;2542 2 YYSIDDNQNK IRRTELKRYYSIDDNQ SIDDNQNKTHDKKEKK R Y Y N K T 0 0 2 2 0 1 0 0 0 1 0 1 0 0 0 1 0 0 2 0 0 0 10 0 1258.5466 Q5TF97;Q5TF96;Q8NI08 Q5TF97 87 96 NCOA7 Nuclear receptor coactivator 7 yes no 2 0.0029207 85.813 By MS/MS 1 1133000 0 1133000 4018 1639 4330 9087 7563 7563 2280 1 YYVTIIDAPGHR LWKFETSKYYVTIIDA IIDAPGHRDFIKNMIT K Y Y H R D 1 1 0 1 0 0 0 1 1 2 0 0 0 0 1 0 1 0 2 1 0 0 12 0 1403.7197 Q5VTE0;P68104;A0A087WV01;A0A087WVQ9;A6PW80;Q5JR01 Q5VTE0 85 96 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha yes no 2;3 0.0020219 77.662 By MS/MS By MS/MS 2 2 3634800 1364800 2270100 4019 1438 4331 9088;9089;9090;9091 7564;7565;7566 7564 3 YYYSDNFFDGQR ENGDSGSRYYYSDNFF DNFFDGQRKRPLGDRA R Y Y Q R K 0 1 1 2 0 1 0 1 0 0 0 0 0 2 0 1 0 0 3 0 0 0 12 0 1573.6474 H0YJ02;H0YJH0;Q9H4B6 H0YJ02 17 28 SAV1 Protein salvador homolog 1 yes no 2 0.015032 50.123 By matching By MS/MS 1 1 571450 342140 229310 4020 887 4332 9092;9093 7567 7567 4189 1