Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Identification type 1ug_R1 Identification type 1ug_R2 Experiment 1ug_R1 Experiment 1ug_R2 Intensity Intensity 1ug_R1 Intensity 1ug_R2 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Deamidation (NQ) site IDs Oxidation (M) site IDs Phospho (STY) site IDs MS/MS Count AAAAAATAPPSPGPAQPGPR AAPARAPRAAAAAATA GPAQPGPRAQRAAPLA R A A P R A 8 1 0 0 0 1 0 2 0 0 0 0 0 0 6 1 1 0 0 0 0 0 20 0 1754.9064 Q6SPF0 Q6SPF0 151 170 SAMD1 Atherin yes yes 2;3 3.1551E-06 65.438 By matching By MS/MS 1 2 2648900 743400 1905500 0 666 0 0;1;2 0;1 1 517 1 AAATPESQEPQAK EGTAQEGKAAATPESQ ESQEPQAKGAEASAAS K A A A K G 4 0 0 0 0 2 2 0 0 0 0 1 0 0 2 1 1 0 0 0 0 0 13 0 1326.6416 P49006 P49006 145 157 MARCKSL1 MARCKS-related protein yes yes 2 0.0098584 63.292 By matching By MS/MS 1 2 1139700 514690 625040 1 561 1 3;4;5 2;3 2 801 2 AAEAGGAEEQYGFLTTPTK YVMAVVDKAAEAGGAE GFLTTPTKQLGAQSPG K A A T K Q 4 0 0 0 0 1 3 3 0 0 1 1 0 1 1 0 3 0 1 0 0 0 19 0 1939.9163 P46821 P46821 1052 1070 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.00037855 71.513 By MS/MS By matching 1 1 3188600 1524700 1663900 2 558 2 6;7 4 4 927 1 AAEDDEDDDVDTK AESATGKRAAEDDEDD EDDDVDTKKQKTDEDD R A A T K K 2 0 0 6 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 13 0 1436.5427 B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1;P06454 B8ZZQ6 87 99 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 2 0.0042696 67.214 By MS/MS By matching 1 1 729290 368610 360680 3 166 3 8;9 5 5 1 AALAPAKESPR SGKTHQIRAALAPAKE APAKESPRKGAAPTPP R A A P R K 4 1 0 0 0 0 1 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 11 1 1109.6193 J3KQ96;E7ETY2;Q13428;H0YAB7 J3KQ96 898 908 TCOF1 Treacle protein yes no 2;3 0.0028754 98 By matching By MS/MS 2 2 10307000 5577000 4729900 4 238 4 10;11;12;13 6;7;8 8 176 3 AANLIVLSLPVARK ELLQEHSRAANLIVLS LSLPVARKGSISDLLY R A A R K G 3 1 1 0 0 0 0 0 0 1 3 1 0 0 1 1 0 0 0 2 0 0 14 1 1463.9188 Q13621 Q13621 1049 1062 SLC12A1 Solute carrier family 12 member 1 yes yes 1 0.014939 6.8882 By matching By MS/MS 1 1 1939700 476820 1462900 5 613 5 14;15 9 9 0 AASAPAKESPR SGKTSQVGAASAPAKE APAKESPRKGAAPAPP G A A P R K 4 1 0 0 0 0 1 0 0 0 0 1 0 0 2 2 0 0 0 0 0 0 11 1 1083.5673 J3KQ96;E7ETY2;Q13428 J3KQ96 373 383 TCOF1 Treacle protein yes no 2;3 0.0034196 80.96 By MS/MS By MS/MS 2 2 14965000 6965400 7999400 6 238 6 16;17;18;19 10;11;12 12 177 3 AAVVTSPPPTTAPHK ________________ PPTTAPHKERYFDRVD R A A H K E 3 0 0 0 0 0 0 0 1 0 0 1 0 0 4 1 3 0 0 2 0 0 15 0 1472.7987 E7EV99;E7ENY0;P35611;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 E7EV99 7 21 ADD1 Alpha-adducin yes no 2 0.001626 81.789 By MS/MS By MS/MS 1 1 2492400 1372900 1119500 7 228 7 20;21 13;14 13 164;725 2 ACNLDVILGFDGSR PGVTDAAKACNLDVIL ILGFDGSRDQNVFVAQ K A C S R D 1 1 1 2 1 0 0 2 0 1 2 0 0 1 0 1 0 0 0 1 0 0 14 0 1535.7402 E7ENL6;P12111 E7ENL6 1227 1240 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0087751 58.098 By MS/MS By MS/MS 1 1 1243100 628860 614200 8 227 8 22;23 15;16 15 2 ADALRVHQETRHR ECEYCTNRADALRVHQ VHQETRHREARAFMCE R A D H R E 2 3 0 1 0 1 1 0 2 0 1 0 0 0 0 0 1 0 0 1 0 0 13 2 1587.8342 P52746 P52746 1548 1560 ZNF142 Zinc finger protein 142 yes yes 2 0.013607 47.228 By MS/MS By matching 1 1 535840 318580 217250 9 569 9 24;25 17 17 208 1 ADEASELACPTPK KLQELSSKADEASELA ELACPTPKEDGLAQQQ K A D P K E 3 0 0 1 1 0 2 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 13 0 1387.6289 A0A0U1RQF0;P49327 A0A0U1RQF0 2192 2204 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 0.0054331 77.633 By MS/MS By MS/MS 1 1 1327900 460790 867130 10 92 10 26;27 18;19 19 691 2 ADEGKSYSVSTSFFK ________________ SVSTSFFKSPTQFSSN M A D F K S 1 0 0 1 0 0 1 1 0 0 0 2 0 2 0 4 1 0 1 1 0 0 15 1 1651.773 E9PIN3 E9PIN3 2 16 NXF1 yes yes 2 0.0097434 50.452 By MS/MS 1 0 0 0 11 257 11 28 20 20 196;197;198;734 1 ADGEYWLGLQNMHLLTLK DYKLGFGRADGEYWLG NMHLLTLKQKYELRVD R A D L K Q 1 0 1 1 0 1 1 2 1 0 5 1 1 0 0 0 1 1 1 0 0 0 18 0 2101.0666 K7ES70;P55083 K7ES70 131 148 MFAP4 Microfibril-associated glycoprotein 4 yes no 3 0.0024663 56.774 By MS/MS By MS/MS 1 1 1773400 785470 987950 12 428 12 29;30 21;22 22 45 2 ADIVFLLDGSINFR PSRPEKKKADIVFLLD LDGSINFRRDSFQEVL K A D F R R 1 1 1 2 0 0 0 1 0 2 2 0 0 2 0 1 0 0 0 1 0 0 14 0 1578.8406 E7ENL6;P12111 E7ENL6 1031 1044 COL6A3 Collagen alpha-3(VI) chain yes no 2 6.2443E-11 98.353 By MS/MS By MS/MS 2 1 0 0 0 13 227 13 31;32;33 23;24;25 23 3 ADIVFLVDGSYSIGIANFVK CSRGVDIKADIVFLVD IGIANFVKVRAFLEVL K A D V K V 2 0 1 2 0 0 0 2 0 3 1 1 0 2 0 2 0 0 1 3 0 0 20 0 2127.1252 D6RGG3;Q99715 D6RGG3 439 458 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0042354 77.912 By matching By MS/MS 1 1 5979200 2687500 3291700 14 218 14 34;35 26 26 1 AEADIVLLVDGSWSIGR SGMECLTRAEADIVLL DGSWSIGRANFRTVRS R A E G R A 2 1 0 2 0 0 1 2 0 2 2 0 0 0 0 2 0 1 0 2 0 0 17 0 1799.9418 D6RGG3;Q99715;A0A087X0A8 D6RGG3 1196 1212 COL12A1 Collagen alpha-1(XII) chain yes no 2;3 2.9927E-48 131.4 By MS/MS By MS/MS 17 20 45643000 18680000 26964000 15 218 15 36;37;38;39;40;41;42;43;44;45;46;47;48;49;50;51;52;53;54;55;56;57;58;59;60;61;62;63;64;65;66;67;68;69;70;71;72 27;28;29;30;31;32;33;34;35;36;37;38;39;40;41;42;43;44;45;46;47;48;49;50;51;52;53;54;55;56;57;58;59;60;61 36 28 AEDGATPSPSNETPK ASSTSSPKAEDGATPS SPSNETPKKKKKRFSF K A E P K K 2 0 1 1 0 0 2 1 0 0 0 1 0 0 3 2 2 0 0 0 0 0 15 0 1499.674 P29966 P29966 138 152 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0 214.82 By MS/MS By MS/MS 2 2 5619100 2486500 3132600 16 546 16 73;74;75;76 62;63;64;65;66 65 418;797 5 AEDGATPSPSNETPKK ASSTSSPKAEDGATPS PSNETPKKKKKRFSFK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 2 0 0 3 2 2 0 0 0 0 0 16 1 1627.7689 P29966 P29966 138 153 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.0023497 59.864 By MS/MS 1 431030 0 431030 17 546 17 77 67 67 418;797 1 AEDGATPSPSNETPKKK ASSTSSPKAEDGATPS SNETPKKKKKRFSFKK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 3 0 0 3 2 2 0 0 0 0 0 17 2 1755.8639 P29966 P29966 138 154 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.00057194 70.197 By MS/MS By MS/MS 1 1 7342400 3833600 3508800 18 546 18 78;79 68;69 68 418;797 2 AEEDEILNRSPR EEEDRKPKAEEDEILN EILNRSPRNRKPRRE_ K A E P R N 1 2 1 1 0 0 3 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1427.7005 P27824 P27824 574 585 CANX Calnexin yes yes 2 0.010649 48.277 By matching By MS/MS 1 1 478080 232700 245380 19 543 19 80;81 70 70 80 416 1 AEEKSPISINVK PSSPREVKAEEKSPIS SPISINVKTVKKEPED K A E V K T 1 0 1 0 0 0 2 0 0 2 0 2 0 0 1 2 0 0 0 1 0 0 12 1 1313.7191 Q9UK58 Q9UK58 348 359 CCNL1 Cyclin-L1 yes yes 2 6.3971E-91 164.7 By MS/MS By MS/MS 1 1 3685200 1697500 1987800 20 779 20 82;83 71;72 72 635 2 AEFAEYASVDR PGPQTEGKAEFAEYAS AEYASVDRNKKCRQSV K A E D R N 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 11 0 1256.5673 Q9NWQ8 Q9NWQ8 222 232 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 0.0020134 74.162 By MS/MS By MS/MS 1 1 1310600 692750 617860 21 765 21 84;85 73;74 74 949 2 AEKVDPSEPSPAESEPTWWNK KSTMTVRKAEKVDPSE SEPTWWNKPETDLGGP K A E N K P 2 0 1 1 0 0 4 0 0 0 0 2 0 0 4 3 1 2 0 1 0 0 21 1 2383.0968 J3KTN9 J3KTN9 117 137 MARCH10 yes yes 3 0.008843 41.513 By matching By MS/MS 1 1 5624300 2126000 3498200 22 413 22 86;87 75 75 324;325 0 AEPVEVVAPR SPWGAEVKAEPVEVVA PVEVVAPRGKSGAALS K A E P R G 2 1 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 3 0 0 10 0 1065.5819 P09874 P09874 487 496 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0080294 78.113 By MS/MS By MS/MS 1 1 2485000 1019200 1465800 23 511 23 88;89 76;77 77 2 AESPESSAIESTQSTPQK VSRRAQQRAESPESSA STQSTPQKGRGRPSKT R A E Q K G 2 0 0 0 0 2 3 0 0 1 0 1 0 0 2 5 2 0 0 0 0 0 18 0 1875.8698 Q9NTI5 Q9NTI5 1356 1373 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 3 0.0021314 59.574 By MS/MS By matching 1 1 1441800 732380 709470 24 762 24 90;91 78 78 618;619 1 AESPSPAPPPGLR VAEGGLPRAESPSPAP PAPPPGLRGTLDLQVI R A E L R G 2 1 0 0 0 0 1 1 0 0 1 0 0 0 5 2 0 0 0 0 0 0 13 0 1274.6619 Q9BUA3 Q9BUA3 306 318 C11orf84 Uncharacterized protein C11orf84 yes yes 2 0.0076299 71.976 By MS/MS By matching 1 1 1565700 660930 904770 25 735 25 92;93 79 79 589 1 AFIQKSQLTVHQR YQCAICGKAFIQKSQL SQLTVHQRIHTVVKS_ K A F Q R I 1 1 0 0 0 3 0 0 1 1 1 1 0 1 0 1 1 0 0 1 0 0 13 1 1554.8631 A0A0A0MS50;Q96RE9 A0A0A0MS50 585 597 ZNF300 Zinc finger protein 300 yes no 2 0.0088623 50.034 By MS/MS 1 0 0 0 26 59 26 94 80 80 131;132 686 1 AFLEVNEEGSEAAASTAVVIAGR YVSDAFHKAFLEVNEE TAVVIAGRSLNPNRVT K A F G R S 6 1 1 0 0 0 4 2 0 1 1 0 0 1 0 2 1 0 0 3 0 0 23 0 2290.1441 P01008;Q8TCE1 P01008 403 425 SERPINC1 Antithrombin-III yes no 3 0.0093444 38.346 By MS/MS By MS/MS 1 1 1755600 861410 894180 27 478 27 95;96 81;82 82 1 AFVEDSEDEDGAGEGGSSLLQKR KQLKESFRAFVEDSED GSSLLQKRAKTRQEKA R A F K R A 2 1 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 23 1 2395.0775 H0YFD2;F8WFC1;Q8N9T8 H0YFD2 110 132 KRI1 Protein KRI1 homolog yes no 3 0.0047307 42.309 By MS/MS By matching 1 1 3557400 2114700 1442700 28 317 28 97;98 83 83 255 1 AGAFCLSEDAGLGISSTASLR PDTITEWKAGAFCLSE ISSTASLRAFQPFFVE K A G L R A 4 1 0 1 1 0 1 3 0 1 3 0 0 1 0 4 1 0 0 0 0 0 21 0 2082.0052 P01023;P20742 P01023 767 787 A2M;PZP Alpha-2-macroglobulin;Pregnancy zone protein yes no 3 0.0081767 32.833 By MS/MS By matching 1 1 727300 362270 365040 29 479 29 99;100 84 84 1 AGDDYEVLELDDVPK RHERSLGRAGDDYEVL LELDDVPKENSSGSSP R A G P K E 1 0 0 4 0 0 2 1 0 0 2 1 0 0 1 0 0 0 1 2 0 0 15 0 1676.7781 O43164 O43164 59 73 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 2 0.0095189 44.543 By matching By MS/MS 1 1 643090 238110 404990 30 445 30 101;102 85 85 916 1 AGDLLEDSPK EKGALKRRAGDLLEDS DLLEDSPKRPKEAENP R A G P K R 1 0 0 2 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1043.5135 P51858 P51858 158 167 HDGF Hepatoma-derived growth factor yes yes 2 0.0055703 86.803 By MS/MS By MS/MS 1 1 2856000 980340 1875700 31 566 31 103;104 86;87 87 435 2 AGDLLEDSPKRPK EKGALKRRAGDLLEDS EDSPKRPKEAENPEGE R A G P K E 1 1 0 2 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 0 0 0 13 2 1424.7623 P51858 P51858 158 170 HDGF Hepatoma-derived growth factor yes yes 3 0.0048686 68.751 By MS/MS By MS/MS 1 1 16206000 7354100 8852200 32 566 32 105;106 88;89 89 435 2 AGDPGEMPQSPTGLGQPK AGLAPKRRAGDPGEMP PTGLGQPKRRGRPPKM R A G P K R 1 0 0 1 0 2 1 4 0 0 1 1 1 0 4 1 1 0 0 0 0 0 18 0 1765.8305 H0YHL2;A0A0C4DGI9;J3KPG5;F8VU39;Q9UIF9 H0YHL2 57 74 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 2.8537E-11 103.01 By matching By MS/MS 1 1 2803600 1240200 1563400 33 79 33 107;108 90 90 54 1 AGELEVFNGYFVHFFAPDNLDPIPK YDVKREEKAGELEVFN DNLDPIPKNILFVIDV K A G P K N 2 0 2 2 0 0 2 2 1 1 2 1 0 4 3 0 0 0 1 2 0 0 25 0 2835.3908 Q5T985;P19823 Q5T985 274 298 ITIH2 Inter-alpha-trypsin inhibitor heavy chain H2 yes no 3 0.0055677 43.841 By MS/MS 1 2812000 0 2812000 34 533 34 109 91 91 77 1 AGFAGDDAPR DNGSGMCKAGFAGDDA FAGDDAPRAVFPSIVG K A G P R A 3 1 0 2 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 10 0 975.44101 P63261;P60709;I3L4N8;Q6S8J3;I3L3I0;I3L1U9;P68133;P68032;A5A3E0;C9JUM1;C9JZR7;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;A6NL76;P63267;P62736;P0CG39;P0CG38;F8WCH0;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 19 28 ACTG1;ACTB;POTEE;ACTA1;ACTC1;POTEF;ACTG2;ACTA2;POTEJ;POTEI Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member F;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member J;POTE ankyrin domain family member I yes no 2 0.0070189 80.455 By MS/MS By MS/MS 1 1 2027800 840990 1186800 35 576 35 110;111 92;93 92 2 AGFSWIEVTFK TGQYEREKAGFSWIEV SWIEVTFKNPLVWVHA K A G F K N 1 0 0 0 0 0 1 1 0 1 0 1 0 2 0 1 1 1 0 1 0 0 11 0 1283.655 H7C0L5;B7ZKJ8;Q14624 H7C0L5 567 577 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 5.0208E-16 135.43 By MS/MS 1 2132000 0 2132000 36 165 36 112 94 94 1 AGGASPAASSTAQPPTQHR GGGGGPVRAGGASPAA AQPPTQHRLVARNGEA R A G H R L 5 1 0 0 0 2 0 2 1 0 0 0 0 0 3 3 2 0 0 0 0 0 19 0 1790.866 Q8IU81 Q8IU81 449 467 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 3 0.0098261 44.963 By MS/MS By matching 1 1 693180 543420 149770 37 681 37 113;114 95 95 535 1 AGGPATPLSPTR MATPLPGRAGGPATPL ATPLSPTRLSRLQEKE R A G T R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 2 0 0 0 0 0 12 0 1123.5986 Q03252 Q03252 29 40 LMNB2 Lamin-B2 yes yes 2 0.00065887 100.38 By MS/MS By MS/MS 1 1 2713100 1348900 1364100 38 593 38 115;116 96;97 96 456;809 2 AGGSAALSPSK GMAKKVTKAGGSAALS SAALSPSKKRKNSKKK K A G S K K 3 0 0 0 0 0 0 2 0 0 1 1 0 0 1 3 0 0 0 0 0 0 11 0 944.49271 Q92522 Q92522 24 34 H1FX Histone H1x yes yes 2 3.6606E-16 137.09 By MS/MS By MS/MS 2 2 3689700 1758700 1931000 39 708 39 117;118;119;120 98;99;100;101;102;103;104;105 104 561;562 8 AGGSAALSPSKK GMAKKVTKAGGSAALS AALSPSKKRKNSKKKN K A G K K R 3 0 0 0 0 0 0 2 0 0 1 2 0 0 1 3 0 0 0 0 0 0 12 1 1072.5877 Q92522 Q92522 24 35 H1FX Histone H1x yes yes 2 2.8951E-34 146.84 By MS/MS By MS/MS 1 1 1875400 1099500 775860 40 708 40 121;122 106;107;108;109;110 107 561;562 5 AGIEIFVVVVGR KAVQEAQRAGIEIFVV IFVVVVGRQVNEPHIR R A G G R Q 1 1 0 0 0 0 1 2 0 2 0 0 0 1 0 0 0 0 0 4 0 0 12 0 1257.7445 A0A087X0S5;P12109 A0A087X0S5 963 974 COL6A1 Collagen alpha-1(VI) chain yes no 2 0.00046285 100.02 By MS/MS By matching 1 1 7425500 3101500 4324000 41 43 41 123;124 111 111 1 AGLESGAEPGDGDSDTTKK SKKDKKAKAGLESGAE GDSDTTKKKKKKKKAK K A G K K K 2 0 0 3 0 0 2 4 0 0 1 2 0 0 1 2 2 0 0 0 0 0 19 1 1833.8228 O60832 O60832 481 499 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 0.00011446 60.474 By MS/MS By MS/MS 1 1 1184100 542500 641560 42 454 42 125;126 112;113 113 367;779;780 0 AGLGSPERPPK GSPPSVQRAGLGSPER GSPERPPKTSPGSPRL R A G P K T 1 1 0 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 1 1107.6037 Q9H6F5;H0YG79 Q9H6F5 54 64 CCDC86 Coiled-coil domain-containing protein 86 yes no 2 0.012655 78.529 By matching By MS/MS 1 1 3328400 1401900 1926400 43 752 43 127;128 114 114 607 1 AGLQFPVGR KAKTRSSRAGLQFPVG GLQFPVGRVHRLLRKG R A G G R V 1 1 0 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 9 0 943.52395 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q93077;Q8IUE6;Q7L7L0;P20671;P0C0S8;P04908;P16104;C9J0D1;Q71UI9;P0C0S5;Q16777;Q6FI13;Q96QV6 A0A0U1RR32 22 30 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST1H2AC;HIST2H2AB;HIST3H2A;HIST1H2AD;HIST1H2AG;HIST1H2AB;H2AFX;H2AFV;H2AFZ;HIST2H2AC;HIST2H2AA3;HIST1H2AA Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 1-C;Histone H2A type 2-B;Histone H2A type 3;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2AX;Histone H2A;Histone H2A.V;Histone H2A.Z;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-A yes no 2 0.012485 78.616 By MS/MS By matching 1 1 1635400 717700 917740 44 100 44 129;130 115 115 1 AGPAGLGLSFFK A G F K 2 0 0 0 0 0 0 3 0 0 2 1 0 2 1 1 0 0 0 0 0 0 12 0 1163.6339 REV__Q7Z5P9 yes yes 2 0.010986 65.842 By MS/MS By matching 2 1 1656600 1063900 592690 + 45 807 45 131;132;133 116 116 666 1 AGPSLKTTLK WNHVVDARAGPSLKTT PSLKTTLKPKKVKTLS R A G L K P 1 0 0 0 0 0 0 1 0 0 2 2 0 0 1 1 2 0 0 0 0 0 10 1 1014.6073 F5H6U2;F5GZ82;Q9NP50 F5H6U2 82 91 FAM60A Protein FAM60A yes no 2 0.0028669 80.24 By MS/MS By matching 1 1 474040 375410 98631 46 287 46 134;135 117 117 739;740 1 AGRFDREICLGIPDEASR SLDPALRRAGRFDREI GIPDEASRERILQTLC R A G S R E 2 3 0 2 1 0 2 2 0 2 1 0 0 1 1 1 0 0 0 0 0 0 18 2 2061.0062 O15381 O15381 423 440 NVL Nuclear valosin-containing protein-like yes yes 2 0.014325 42.809 By MS/MS 1 0 0 0 47 443 47 136 118 118 355 1 AGSISTLDSLDFAR SGGGQLNRAGSISTLD LDSLDFARYSDDGNRE R A G A R Y 2 1 0 2 0 0 0 1 0 1 2 0 0 1 0 3 1 0 0 0 0 0 14 0 1451.7256 A0A075B785;Q9P260 A0A075B785 178 191 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 2 0.007778 74.944 By MS/MS By matching 1 1 363600 195630 167970 48 6 48 137;138 119 119 3 1 AHFNAMFQPSSPTR HRMQLESRAHFNAMFQ FQPSSPTRRPGFSPTS R A H T R R 2 1 1 0 0 1 0 0 1 0 0 0 1 2 2 2 1 0 0 0 0 0 14 0 1589.7409 H0Y4Q6;Q8WUA4 H0Y4Q6 392 405 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2 5.7735E-23 133.87 By MS/MS By MS/MS 2 2 2060900 899090 1161800 49 339 49;50 139;140;141;142 120;121 121 36 275;754 2 AIGSTSKPQESPK SSASPVSRAIGSTSKP SKPQESPKGKRKLDLN R A I P K G 1 0 0 0 0 1 1 1 0 1 0 2 0 0 2 3 1 0 0 0 0 0 13 1 1328.6936 M0QYS5;F5H8D7;P18887 M0QYS5 238 250 XRCC1 DNA repair protein XRCC1 yes no 2 0.007145 68.168 By matching By MS/MS 1 1 1014600 573630 440990 50 298 51 143;144 122 122 242 1 AILVDLEPGTMDSVR TGGKYVPRAILVDLEP PGTMDSVRSGPFGQIF R A I V R S 1 1 0 2 0 0 1 1 0 1 2 0 1 0 1 1 1 0 0 2 0 0 15 0 1614.8287 Q5JP53;P07437;Q9BVA1;Q13885;G3V5W4;G3V2R8;G3V3R4;G3V2N6;A0A0B4J269;Q13509 Q5JP53 45 59 TUBB;TUBB2B;TUBB2A;TUBB3 Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain yes no 2 0.00677 58.676 By MS/MS By matching 1 1 552590 287660 264930 51 499 52 145;146 123 123 1 AISAPTSPTR AVKRMYDRAISAPTSP SAPTSPTRLSHSGKRS R A I T R L 2 1 0 0 0 0 0 0 0 1 0 0 0 0 2 2 2 0 0 0 0 0 10 0 999.53491 B0QY95;Q9NQG6 B0QY95 53 62 MIEF1 Mitochondrial dynamics protein MID51 yes no 2 0.00017091 126.66 By matching By MS/MS 1 1 1562600 759640 802980 52 134 53 147;148 124 124 111 1 AKGPSPPGAK GSHRAGERAKGPSPPG GPSPPGAKRRRLSESS R A K A K R 2 0 0 0 0 0 0 2 0 0 0 2 0 0 3 1 0 0 0 0 0 0 10 1 908.50797 Q96S55 Q96S55 61 70 WRNIP1 ATPase WRNIP1 yes yes 2 0.014679 72.705 By matching By MS/MS 1 1 955820 471220 484600 53 728 54 149;150 125 125 580 1 AKPAMPQDSVPSPR DEVAPAKKAKPAMPQD QDSVPSPRSLQGKSTT K A K P R S 2 1 0 1 0 1 0 0 0 0 0 1 1 0 4 2 0 0 0 1 0 0 14 1 1479.7504 P53396 P53396 470 483 ACLY ATP-citrate synthase yes yes 3 0.0032805 57.616 By MS/MS 1 0 0 0 54 572 55 151 126 126 70 443 1 AKTPVTLK KREPLKGRAKTPVTLK AKTPVTLKQRRVEHNQ R A K L K Q 1 0 0 0 0 0 0 0 0 0 1 2 0 0 1 0 2 0 0 1 0 0 8 1 856.5382 G5E972;P42167;H0YJH7 G5E972 206 213 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2 1.9683E-09 136.49 By MS/MS By MS/MS 1 1 7469000 4140700 3328300 55 331 56 152;153 127;128 127 751 2 ALAAAGYDVEK VSLAALKKALAAAGYD AAGYDVEKNNSRIKLG K A L E K N 4 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1106.5608 P10412;P22492;P16403;Q02539;P16402 P10412 65 75 HIST1H1E;HIST1H1T;HIST1H1C;HIST1H1A;HIST1H1D Histone H1.4;Histone H1t;Histone H1.2;Histone H1.1;Histone H1.3 yes no 2 0.006603 70.552 By MS/MS By matching 1 1 1239500 471270 768200 56 515 57 154;155 129 129 1 ALALGALQNIR KLNTYNDKALALGALQ LGALQNIRYRGGNTRT K A L I R Y 3 1 1 0 0 1 0 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1138.6822 D6RGG3;Q99715;A0A087X0A8;H0Y5N9 D6RGG3 2385 2395 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0057477 72.485 By MS/MS By matching 1 1 389770 191160 198600 57 218 58 156;157 130 130 1 ALEILQEEDLIDEDDIPVR KGQAGLQRALEILQEE DEDDIPVRSFFPENWL R A L V R S 1 1 0 4 0 1 4 0 0 3 3 0 0 0 1 0 0 0 0 1 0 0 19 0 2224.1111 F5GXS0;A0A140TA49;A0A140TA44;A0A140TA32;A0A140TA29;A0A0G2JL54;A0A0G2JPR0;P0C0L5;P0C0L4 F5GXS0 757 775 C4B;C4A Complement C4-B;Complement C4 beta chain;Complement C4-B alpha chain;C4a anaphylatoxin;C4b-B;C4d-B;Complement C4 gamma chain;Complement C4-A;Complement C4 beta chain;Complement C4-A alpha chain;C4a anaphylatoxin;C4b-A;C4d-A;Complement C4 gamma chain yes no 2 5.3996E-05 78.486 By matching By MS/MS 1 1 5780800 1868800 3912000 58 85 59 158;159 131 131 1 ALEIYQHQVVVANILESR IVINRARKALEIYQHQ VANILESRQSFVFIVT K A L S R Q 2 1 1 0 0 2 2 0 1 2 2 0 0 0 0 1 0 0 1 3 0 0 18 0 2081.1269 Q9HAB8 Q9HAB8 246 263 PPCS Phosphopantothenate--cysteine ligase yes yes 2 0.00042798 60.918 By MS/MS 1 0 0 0 59 756 60 160 132 132 110;244 613 1 ALEVAEYLTPVLK VINTVKGKALEVAEYL EYLTPVLKESKFKETG K A L L K E 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 0 1 0 1 2 0 0 13 0 1444.8177 F8WDI0;Q9NT62 F8WDI0 12 24 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes no 2 1.5073E-07 104.22 By MS/MS By MS/MS 1 1 1431600 842060 589590 60 316 61 161;162 133;134 133 897 2 ALILVGLER NLRQEGVRALILVGLE LILVGLERVVNLERLM R A L E R V 1 1 0 0 0 0 1 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 9 0 982.61752 E7ENL6;P12111 E7ENL6 1369 1377 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.012145 79.469 By MS/MS By MS/MS 1 1 3137600 1481300 1656300 61 227 62 163;164 135;136 135 2 ALMLMSKSSFQPPK LFHLHPMRALMLMSKS KSSFQPPKLRDKTRWT R A L P K L 1 0 0 0 0 1 0 0 0 0 2 2 2 1 2 3 0 0 0 0 0 0 14 1 1563.8153 Q12851 Q12851 222 235 MAP4K2 Mitogen-activated protein kinase kinase kinase kinase 2 yes yes 2 0.013209 41.399 By MS/MS 1 0 0 0 62 604 63 165 137 137 81 1 ALPNNTSSSPQPK LPPGSTKRALPNNTSS TSSSPQPKKKPLDGEY R A L P K K 1 0 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 13 0 1339.6732 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 148 160 TP53 Cellular tumor antigen p53 yes no 2 5.6427E-16 131.79 By MS/MS By MS/MS 1 1 9010900 3249200 5761800 63 38 64 166;167 138;139;140 140 19;20 3 ALPSLNTGSSSPR QTSCNPSRALPSLNTG NTGSSSPRGVEEPDVI R A L P R G 1 1 1 0 0 0 0 1 0 0 2 0 0 0 2 4 1 0 0 0 0 0 13 0 1285.6626 O14545 O14545 317 329 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 2.9643E-07 106.55 By MS/MS By MS/MS 1 1 6918600 3136300 3782300 64 440 65 168;169 141;142 141 352;778 2 ALSASHTDLAH NNCLADSRALSASHTD ASHTDLAH________ R A L A H - 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1121.5465 H0YJK1;H0YG16 H0YJK1 34 44 KLC1 yes no 2 2.4446E-10 128.81 By matching By MS/MS 1 1 2804700 1231500 1573200 65 364 66 170;171 143 143 287 1 ALSSGGSITSPPLSPALPK NFGPEWLRALSSGGSI PLSPALPKYKLADYRY R A L P K Y 2 0 0 0 0 0 0 2 0 1 3 1 0 0 4 5 1 0 0 0 0 0 19 0 1778.9778 C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2;C9JHW1;E7ESB6;I1E4Y6;Q6Y7W6 C9JW88 17 35 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 0.00045974 73.082 By MS/MS 1 2067900 0 2067900 66 174 67 172 144 144 132;133 1 ALVEFESNPEETREPGSPPSVQR TSVSRTRRALVEFESN GSPPSVQRAGLGSPER R A L Q R A 1 2 1 0 0 1 5 1 0 0 1 0 0 1 4 3 1 0 0 2 0 0 23 1 2554.23 Q9H6F5;H0YG79 Q9H6F5 31 53 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 0.0010008 64.83 By MS/MS By MS/MS 1 1 6195200 2859900 3335300 67 752 68 173;174 145;146 145 608;849 2 ALVLIAFAQYLQQCPFEDHVK DLGEENFKALVLIAFA CPFEDHVKLVNEVTEF K A L V K L 3 0 0 1 1 3 1 0 1 1 3 1 0 2 1 0 0 0 1 2 0 0 21 0 2489.2777 A0A0C4DGB6;CON__P02768-1;P02768;A0A087WWT3;H7C013 A0A0C4DGB6 45 65 ALB Serum albumin yes no 3 2.7973E-75 148.44 By MS/MS 1 11355000 11355000 0 + 68 77 69 175 147 147 1 AMSTTSISSPQPGK EIFKQKERAMSTTSIS ISSPQPGKLRSPFLQK R A M G K L 1 0 0 0 0 1 0 1 0 1 0 1 1 0 2 4 2 0 0 0 0 0 14 0 1390.6762 H0Y5J4;B4DDD6;Q9UJU6 H0Y5J4 196 209 DBNL Drebrin-like protein yes no 2 0.0058416 70.373 By MS/MS By MS/MS 2 2 2716200 1565500 1150700 69 144 70;71 176;177;178;179 148;149;150 150 23 115;708 3 ANIMNEKCVVENAEK VFAVLGFKANIMNEKC CVVENAEKILGYLNTN K A N E K I 2 0 3 0 1 0 3 0 0 1 0 2 1 0 0 0 0 0 0 2 0 0 15 1 1747.8233 Q9H1V8 Q9H1V8 359 373 SLC6A17 Sodium-dependent neutral amino acid transporter SLC6A17 yes yes 3 0.0094603 45.213 By MS/MS 1 0 0 0 70 746 72 180 151 151 107;108 97 1 ANQQFLVYCEIDGSGNGWTVFQK LYFIKPLKANQQFLVY NGWTVFQKRLDGSVDF K A N Q K R 1 0 2 1 1 3 1 3 0 1 1 1 0 2 0 1 1 1 1 2 0 0 23 0 2660.2329 C9JEU5;C9JC84;P02679;C9JPQ9;C9JU00 C9JEU5 208 230 FGG Fibrinogen gamma chain yes no 2;3 1.2506E-232 145.02 By MS/MS By MS/MS 4 4 105180000 38278000 66905000 71 182 73;74 181;182;183;184;185;186;187;188 152;153;154;155;156;157 153 20;154 6 ANSNKELGVDQESEEGKGK PIIFVSDRANSNKELG ESEEGKGKTSPDKQKQ R A N G K T 1 0 2 1 0 1 4 3 0 0 1 3 0 0 0 2 0 0 0 1 0 0 19 2 2017.9552 H3BUR3;H3BSA2;F8W8F5;P20807 H3BUR3 13 31 CAPN3 Calpain-3 yes no 2 0.014013 40.52 By MS/MS 1 0 0 0 72 312 75 189 158 158 38;39 252 1 ANVVTTPSTNRKNK TNVFGKKRANVVTTPS PSTNRKNKKNKTKETP R A N N K K 1 1 3 0 0 0 0 0 0 0 0 2 0 0 1 1 3 0 0 2 0 0 14 2 1528.8322 H0Y785;H0Y472;H0Y4P6;E9PDP5;Q8IWZ3 H0Y785 24 37 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes no 3 0.011405 44.511 By MS/MS 1 0 0 0 73 248 76 190 159 159 34 191;731;732 1 APCNIQMEDPTFK ENMERNCRAPCNIQME QMEDPTFKENYRFHAI R A P F K E 1 0 1 1 1 1 1 0 0 1 0 1 1 1 2 0 1 0 0 0 0 0 13 0 1549.6905 P00451 P00451 1920 1932 F8 Coagulation factor VIII;Factor VIIIa heavy chain, 200 kDa isoform;Factor VIIIa heavy chain, 92 kDa isoform;Factor VIII B chain;Factor VIIIa light chain yes yes 2 0.012299 44.309 By MS/MS 1 0 0 0 74 475 77 191 160 160 67 785 1 APIDTSDVEEK ITAFKMEKAPIDTSDV DTSDVEEKAEEIIAEA K A P E K A 1 0 0 2 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1202.5667 D6RIY6;Q06265 D6RIY6 285 295 EXOSC9 Exosome complex component RRP45 yes no 2 0.0047912 83.397 By MS/MS By matching 1 1 891310 289740 601570 75 220 78 192;193 161 161 158;722 1 APLNFNSEK TFSQKTKKAPLNFNSE PLNFNSEKMSRSFRSW K A P E K M 1 0 2 0 0 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 9 0 1018.5084 A0A087WXL3;O75417 A0A087WXL3 1161 1169 POLQ DNA polymerase theta yes no 2 0.011107 72.138 By matching By MS/MS 1 1 10213000 4033600 6179600 76 31 79 194;195 162 162 6;7 1 APVQPQQSPAAAPGGTDEKPSGK MEEGGRDKAPVQPQQS TDEKPSGKERRDAGDK K A P G K E 4 0 0 1 0 3 1 3 0 0 0 2 0 0 5 2 1 0 0 1 0 0 23 1 2217.1026 F8WBS8;C9JPC0;Q13200 F8WBS8 9 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 3 0.0064386 48.872 By matching By MS/MS 1 1 1012600 495810 516820 77 185 80 196;197 163 163 141 1 AQEYIFKYIVQSRR EHIQEVLKAQEYIFKY KYIVQSRRLFSLATGG K A Q R R L 1 2 0 0 0 2 1 0 0 2 0 1 0 1 0 1 0 0 2 1 0 0 14 2 1799.9683 F5GXW1;H0Y7H7;H0Y599;Q8N1I0 F5GXW1 692 705 DOCK4 Dedicator of cytokinesis protein 4 yes no 3 0.012056 43.991 By MS/MS 1 0 0 0 78 283 81 198 164 164 171 225 1 AQLSPGIYDDTSAR STLHEAPKAQLSPGIY IYDDTSARRTPVSYQN K A Q A R R 2 1 0 2 0 1 0 1 0 1 1 0 0 0 1 2 1 0 1 0 0 0 14 0 1492.7158 E7EVK1;A0A088AWL3;O75376 E7EVK1 100 113 NCOR1 Nuclear receptor corepressor 1 yes no 2 0.0028987 80.534 By MS/MS By matching 1 1 1882500 737920 1144500 79 51 82 199;200 165 165 34 1 AQRIRQVLQLLS SDPPLPGRAQRIRQVL RQVLQLLS________ R A Q L S - 1 2 0 0 0 3 0 0 0 1 3 0 0 0 0 1 0 0 0 1 0 0 12 2 1423.8623 H7C0T1;H7C2R9;Q9BRJ6 H7C0T1 151 162 C7orf50 Uncharacterized protein C7orf50 yes no 2 0.014825 68.016 By matching By MS/MS 1 1 3935900 1771500 2164400 80 392 83 201;202 166 166 307 1 AQTLPTSVVTITSESSPGKR QSTPASSRAQTLPTSV SESSPGKREKDKEKDK R A Q K R E 1 1 0 0 0 1 1 1 0 1 1 1 0 0 2 4 4 0 0 2 0 0 20 1 2058.0957 A0A087WUZ3;Q01082 A0A087WUZ3 2328 2347 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 3 0.005235 43.534 By matching By MS/MS 1 1 2759400 1419100 1340300 81 22 84 203;204 167 167 9 1 AQVLGNMDSSHKR A Q K R 1 1 1 1 0 1 0 1 1 0 1 1 1 0 0 2 0 0 0 1 0 0 13 1 1441.7096 REV__H0YAP9 yes no 2 0.014939 60.167 By MS/MS By matching 2 1 26673000 17065000 9608100 + 82 802 85 205;206;207 168 168 103 1 ARMMERMSLK EELEKIEKARMMERMS MMERMSLKHQNSGKWA K A R L K H 1 2 0 0 0 0 1 0 0 0 1 1 3 0 0 1 0 0 0 0 0 0 10 2 1251.625 X6RJY0;Q9BVJ6 X6RJY0 121 130 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 0.0070995 73.665 By MS/MS By matching 1 1 581760 165350 416400 83 737 86 208;209 169 169 95;96 1 ASAPSPNAQVACDHCLK DVWTPPARASAPSPNA VACDHCLKEAAVKTCL R A S L K E 4 0 1 1 2 1 0 0 1 0 1 1 0 0 2 2 0 0 0 1 0 0 17 0 1824.8247 Q14258 Q14258 96 112 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.0051625 52.42 By matching By MS/MS 1 1 873540 436770 436770 84 616 87 210;211 170 170 475 1 ASAVSELSPR YGTGSASRASAVSELS AVSELSPRERSPALKS R A S P R E 2 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1015.5298 Q9Y2W1 Q9Y2W1 236 245 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 8.0748E-08 132.79 By MS/MS By MS/MS 1 1 16131000 8536400 7595000 85 792 88 212;213 171;172;173;174 172 653 4 ASEDTTSGSPPKK KVEIGQKRASEDTTSG TSGSPPKKSSAGPKRD R A S K K S 1 0 0 1 0 0 1 1 0 0 0 2 0 0 2 3 2 0 0 0 0 0 13 1 1303.6256 H0YER7;G3V1C3;Q9BZZ5 H0YER7 271 283 API5 Apoptosis inhibitor 5 yes no 2 0.0021514 67.234 By MS/MS By MS/MS 1 1 11912000 6217300 5694800 86 319 89 214;215 175;176 175 256 2 ASGQAFELILSPR QVKELEKRASGQAFEL FELILSPRSKESVPEF R A S P R S 2 1 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 13 0 1387.746 A2A2D0;P16949 A2A2D0 15 27 STMN1 Stathmin yes no 2;3 3.3415E-221 192.4 By MS/MS By MS/MS 3 4 15686000 7927200 7759300 87 116 90 216;217;218;219;220;221;222 177;178;179;180 180 80;81 4 ASSLEDLVLK PCSAPLARASSLEDLV SLEDLVLKEASTAVST R A S L K E 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 10 0 1073.5968 Q15477 Q15477 254 263 SKIV2L Helicase SKI2W yes yes 2 0.0086886 82.494 By MS/MS By matching 1 1 4924200 2321200 2603000 88 627 91 223;224 181 181 485 1 ASSLGEIDESSELR EPPPAPPRASSLGEID IDESSELRVLDIPGQD R A S L R V 1 1 0 1 0 0 3 1 0 1 2 0 0 0 0 4 0 0 0 0 0 0 14 0 1491.7053 Q16513 Q16513 581 594 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.008944 61.409 By MS/MS By matching 1 1 8321100 3623000 4698200 89 631 92 225;226 182 182 488 1 ASSLNENVDHSALLK GVRLSLPRASSLNENV VDHSALLKLGTSVSER R A S L K L 2 0 2 1 0 0 1 0 1 0 3 1 0 0 0 3 0 0 0 1 0 0 15 0 1596.8107 D3DTX6;Q96SB3 D3DTX6 98 112 PPP1R9B Neurabin-2 yes no 2;3 0.010562 54.951 By MS/MS By MS/MS 2 2 1810900 936050 874830 90 208 93 227;228;229;230 183;184 184 151 2 ASSVSTKESPAR SVKPAQVKASSVSTKE STKESPARKAAPAPGK K A S A R K 2 1 0 0 0 0 1 0 0 0 0 1 0 0 1 4 1 0 0 1 0 0 12 1 1218.6204 J3KQ96;E7ETY2;Q13428 J3KQ96 225 236 TCOF1 Treacle protein yes no 3 0.01368 52.008 By MS/MS 1 310080 0 310080 91 238 94 231 185 185 178 1 ASSVSTKESPARK SVKPAQVKASSVSTKE TKESPARKAAPAPGKV K A S R K A 2 1 0 0 0 0 1 0 0 0 0 2 0 0 1 4 1 0 0 1 0 0 13 2 1346.7154 J3KQ96;E7ETY2;Q13428 J3KQ96 225 237 TCOF1 Treacle protein yes no 3 0.0054867 67.685 By MS/MS By MS/MS 1 1 1571300 762080 809240 92 238 95 232;233 186;187 187 178 2 ASVTGYLLVYESVDGTVK LLTWRPPRASVTGYLL ESVDGTVKEVIVGPDT R A S V K E 1 0 0 1 0 0 1 2 0 0 2 1 0 0 0 2 2 0 2 4 0 0 18 0 1899.983 F5H7V9;E9PC84;J3QSU6;P24821;H0YGZ3 F5H7V9 1549 1566 TNC Tenascin yes no 2;3 2.3956E-21 108.97 By MS/MS By MS/MS 2 2 42360000 18974000 23387000 93 246 96 234;235;236;237 188;189;190 189 3 ATADDELSFK AIAKYDFKATADDELS ADDELSFKRGDILKVL K A T F K R 2 0 0 2 0 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 10 0 1095.5084 P62993;J3KT38;J3QRL5 P62993 11 20 GRB2 Growth factor receptor-bound protein 2 yes no 2 0.0080392 78.149 By matching By MS/MS 1 1 3542400 1905800 1636600 94 582 97 238;239 191 191 1 ATAGDTHLGGEDFDNR DAGVFEVKATAGDTHL GGEDFDNRLVNHFMEE K A T N R L 2 1 1 3 0 0 1 3 1 0 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1674.7234 P48741;P17066;V9GZ37;Q53FA3;A0A0G2JIW1;P34931;P0DMV9;P0DMV8 P48741 223 238 HSPA7;HSPA6;HSPA1A;HSPA1L;HSPA1B Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 6;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 3 0.0083911 41.743 By MS/MS 1 624330 0 624330 95 526;83 98 240 192 192 1 ATAPQTQHVSPMR EKSSPGHRATAPQTQH TQHVSPMRQVEPPAKK R A T M R Q 2 1 0 0 0 2 0 0 1 0 0 0 1 0 2 1 2 0 0 1 0 0 13 0 1422.7038 E9PK06;E9PPR1;E9PL12;E9PL71;E9PQ49;E9PI39;E9PQZ1;E9PK01;A0A087X1X7;E9PRY8;P29692 E9PK06 105 117 EEF1D Elongation factor 1-delta yes no 2;3 0.0021089 72.523 By MS/MS By MS/MS 2 2 21764000 10472000 11292000 96 48 99 241;242;243;244 193;194;195 193 33;683 3 ATASSCNSPFPQR KGKRNENRATASSCNS CNSPFPQRPRKRLTEQ R A T Q R P 2 1 1 0 1 1 0 0 0 0 0 0 0 1 2 3 1 0 0 0 0 0 13 0 1421.6358 A0A0A0MTQ1;Q96GE4 A0A0A0MTQ1 281 293 CEP95 Centrosomal protein of 95 kDa yes no 2 0.013739 42.395 By MS/MS 1 482480 0 482480 97 69 100 245 196 196 10 49;50 1 ATFYGLYSMSCDFQGLGPK LFGSLNVKATFYGLYS DFQGLGPKKVLRELLR K A T P K K 1 0 0 1 1 1 0 3 0 0 2 1 1 2 1 2 1 0 2 0 0 0 19 0 2140.9598 Q9UHD4 Q9UHD4 154 172 CIDEB Cell death activator CIDE-B yes yes 3 0.0049091 51.695 By MS/MS 1 121120 121120 0 98 774 101 246 197 197 249 100 632 1 ATNESEDEIPQLVPIGK GRGKAQVKATNESEDE PQLVPIGKKTPANEKV K A T G K K 1 0 1 1 0 1 3 1 0 2 1 1 0 0 2 1 1 0 0 1 0 0 17 0 1838.9262 J3QSV6;O76021 J3QSV6 356 372 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 6.3951E-60 146.67 By MS/MS By MS/MS 1 1 19403000 9239300 10164000 99 416 102 247;248 198;199 199 326;775 2 ATNESEDEIPQLVPIGKK GRGKAQVKATNESEDE QLVPIGKKTPANEKVE K A T K K T 1 0 1 1 0 1 3 1 0 2 1 2 0 0 2 1 1 0 0 1 0 0 18 1 1967.0211 J3QSV6;O76021 J3QSV6 356 373 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 3 0.0076199 49.559 By MS/MS By matching 1 1 1981000 1072800 908250 100 416 103 249;250 200 200 326;775 1 ATVTPSPVK KMPKPRLKATVTPSPV TVTPSPVKGKGKVGRP K A T V K G 1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 1 2 0 0 2 0 0 9 0 898.51238 Q9H1E3 Q9H1E3 176 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 8.3852E-60 159.09 By MS/MS By MS/MS 1 1 38441000 14634000 23806000 101 745 104 251;252 201;202 202 597;844;845 2 ATVTPSPVKGK KMPKPRLKATVTPSPV TPSPVKGKGKVGRPTA K A T G K G 1 0 0 0 0 0 0 1 0 0 0 2 0 0 2 1 2 0 0 2 0 0 11 1 1083.6288 Q9H1E3 Q9H1E3 176 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 1.1262E-72 159.79 By MS/MS By MS/MS 3 3 38561000 21865000 16696000 102 745 105;106 253;254;255;256;257;258 203;204;205;206;207;208;209;210 204 597;844;845 8 AVAGVMITASHNR PYAVQKLKAVAGVMIT MITASHNRKEDNGYKV K A V N R K 3 1 1 0 0 0 0 1 1 1 0 0 1 0 0 1 1 0 0 2 0 0 13 0 1325.6874 Q6PCE3 Q6PCE3 166 178 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 2 0.014709 60.161 By matching By MS/MS 1 1 815830 352210 463620 103 663 107 259;260 211 211 516 1 AVCMLSNTTAIAEAWAR GDLAKVQRAVCMLSNT AIAEAWARLDHKFDLM R A V A R L 5 1 1 0 1 0 1 0 0 1 1 0 1 0 0 1 2 1 0 1 0 0 17 0 1863.8971 P68363;P68366;Q71U36;C9J2C0;Q9NY65;Q6PEY2;Q13748;V9GZ17 P68363 374 390 TUBA1B;TUBA4A;TUBA1A;TUBA8;TUBA3E;TUBA3C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2 0.0075832 51.286 By MS/MS 1 0 0 0 104 584 108 261 212 212 75 1 AVFVDLEPTVIDEVR GAGKHVPRAVFVDLEP PTVIDEVRTGTYRQLF R A V V R T 1 1 0 2 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 4 0 0 15 0 1700.8985 P68363;F5H5D3;Q9BQE3;Q71U36;F8VVB9;F8VRK0;F8VX09;F8VWV9;F8VRZ4;F8VS66;F8VQQ4 P68363 65 79 TUBA1B;TUBA1C;TUBA1A Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain yes no 2;3 3.1618E-157 154.65 By MS/MS By MS/MS 2 2 25069000 11798000 13271000 105 584 109 262;263;264;265 213;214;215 214 3 AVMDDFAAFVEK KATKEQLKAVMDDFAA DFAAFVEKCCKADDKE K A V E K C 3 0 0 2 0 0 1 0 0 0 0 1 1 2 0 0 0 0 0 2 0 0 12 0 1341.6275 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;C9JKR2;A0A087WWT3 A0A0C4DGB6 570 581 ALB Serum albumin yes no 2 0.0056854 73.499 By MS/MS By MS/MS 1 1 1863000 971640 891340 + 106 77 110 266;267 216;217 217 2 AVSVPASFFR PRGRRSRRAVSVPASF SVPASFFRRLAPSPAR R A V F R R 2 1 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 0 2 0 0 10 0 1079.5764 O14654 O14654 425 434 IRS4 Insulin receptor substrate 4 yes yes 2 0.013838 71.555 By matching By MS/MS 1 1 672100 72026 600070 107 441 111 268;269 218 218 353 1 AVVLPGGTATSPK MAASVARKAVVLPGGT GGTATSPKMIAKNVLG K A V P K M 2 0 0 0 0 0 0 2 0 0 1 1 0 0 2 1 2 0 0 2 0 0 13 0 1196.6765 H0Y5I5;F8WCX2;Q8N1G0 H0Y5I5 26 38 ZNF687 Zinc finger protein 687 yes no 2 0.014875 49.06 By MS/MS 1 0 0 0 108 314 112 270 219 219 253;746;747 1 AVVSEDDFQHSSNSTYR ________________ HSSNSTYRTTSSSLRA M A V Y R T 1 1 1 2 0 1 1 0 1 0 0 0 0 1 0 4 1 0 1 2 0 0 17 0 1940.85 Q9BZD2 Q9BZD2 2 18 SLC29A3 Equilibrative nucleoside transporter 3 yes yes 2 0.013942 42.629 By MS/MS 1 0 0 0 109 742 113 271 220 220 238 593;594 1 AYFHLLNQIAPKGQK EFMLTDSKAYFHLLNQ QIAPKGQKEGEPRIDI K A Y Q K E 2 0 1 0 0 2 0 1 1 1 2 2 0 1 1 0 0 0 1 0 0 0 15 1 1726.9519 H7C4N2;A0A0A0MSQ0;P13797 H7C4N2 22 36 PLS3 Plastin-3 yes no 2 0.0079489 52.79 By MS/MS 1 0 0 0 110 63 114 272 221 221 133 866 1 AYIFIDEAHITQALIWLSQR LKTFAQARAYIFIDEA ALIWLSQRQKDNGCFR R A Y Q R Q 3 1 0 1 0 2 1 0 1 4 2 0 0 1 0 1 1 1 1 0 0 0 20 0 2387.2638 P01023 P01023 1054 1073 A2M Alpha-2-macroglobulin yes yes 3 0.00013436 72.421 By MS/MS 1 14185000 0 14185000 111 479 115 273 222 222 1 AYLEGLCVEWLR AREAEQWRAYLEGLCV GLCVEWLRRYLENGKE R A Y L R R 1 1 0 0 1 0 2 1 0 0 3 0 0 0 0 0 0 1 1 1 0 0 12 0 1507.7493 A0A140TA13;A0A140T953;P30685;P30498;P30495;P30491;P30490;P30484;P30464;P18465;P18464;P10319;A0A140T9G0;A0A140T9T1;A0A140T9W2;A0A140T9U0;A0A140T9M0;P04222;P30488;P30487 A0A140TA13 182 193 HLA-B;HLA-C HLA class I histocompatibility antigen, B-35 alpha chain;HLA class I histocompatibility antigen, B-78 alpha chain;HLA class I histocompatibility antigen, B-56 alpha chain;HLA class I histocompatibility antigen, B-53 alpha chain;HLA class I histocompatibility antigen, B-52 alpha chain;HLA class I histocompatibility antigen, B-46 alpha chain;HLA class I histocompatibility antigen, B-15 alpha chain;HLA class I histocompatibility antigen, B-57 alpha chain;HLA class I histocompatibility antigen, B-51 alpha chain;HLA class I histocompatibility antigen, B-58 alpha chain;HLA class I histocompatibility antigen, Cw-3 alpha chain;HLA class I histocompatibility antigen, B-50 alpha chain;HLA class I histocompatibility antigen, B-49 alpha chain no no 2 6.3807E-06 105.4 By MS/MS 1 1028800 0 1028800 112 104;548 116 274 223 223 1 CDVMYGIEDTQDTVSLTVDGVVFHYR ASDAGLYRCDVMYGIE DGVVFHYRAATSRYTL R C D Y R A 0 1 0 4 1 1 1 2 1 1 1 0 1 1 0 1 3 0 2 5 0 0 26 0 3018.3739 Q86W61;D6RGZ6;E9PF17;P13611 Q86W61 130 155 VCAN Versican core protein yes no 3 0.0013439 48.489 By MS/MS By matching 1 1 7803600 3408900 4394600 113 219 117 275;276 224 224 27 1 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK PPVVLRLKCGSGPVHI DEEEEDVKLLSISGKR K C G V K L 2 0 0 3 1 1 8 3 2 1 1 1 0 0 1 3 0 0 0 4 0 0 31 0 3379.4634 P06748;E5RI98 P06748 104 134 NPM1 Nucleophosmin yes no 3;4 2.8568E-16 77.63 By MS/MS By MS/MS 2 2 67988000 27842000 40146000 114 497 118 277;278;279;280 225;226 225 388 2 CKEAVTTIAAYWHGTQAR RELKHQKRCKEAVTTI YWHGTQARRELKRLKE R C K A R R 4 1 0 0 1 1 1 1 1 1 0 1 0 0 0 0 3 1 1 1 0 0 18 1 2062.0054 E9PDF6;O43795 E9PDF6 779 796 MYO1B Unconventional myosin-Ib yes no 3 0.013266 40.493 By MS/MS By matching 1 1 4709300 2051300 2658100 115 247 119 281;282 227 227 167 1 CQKSLNEFLEEKR TILDQLQRCQKSLNEF NEFLEEKRSAFPRFYF R C Q K R S 0 1 1 0 1 1 3 0 0 0 2 2 0 1 0 1 0 0 0 0 0 0 13 2 1679.8301 Q8NCM8 Q8NCM8 1411 1423 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 3 0.0061424 48.513 By MS/MS By matching 1 1 6028600 2858600 3170000 116 697 120 283;284 228 228 98;230 1 CSGPGLSPGMVR VTDASKVKCSGPGLSP GLSPGMVRANLPQSFQ K C S V R A 0 1 0 0 1 0 0 3 0 0 1 0 1 0 2 2 0 0 0 1 0 0 12 0 1216.5693 A0A087WWY3;Q5HY54;Q60FE5;P21333 A0A087WWY3 1426 1437 FLNA Filamin-A yes no 2 0.0013646 98.337 By MS/MS By MS/MS 1 1 1786400 916670 869710 117 30 121 285;286 229;230 230 14 2 DAEASLAAVKSGEVDLHQLASTWAK ESLSDYDRDAEASLAA QLASTWAKAYAETTLE R D A A K A 6 0 0 2 0 1 2 1 1 0 3 2 0 0 0 3 1 1 0 2 0 0 25 1 2596.3133 F5H744;Q9NQ89 F5H744 33 57 C12orf4 Protein C12orf4 yes no 3 0.0066238 41.45 By MS/MS 1 5182900 0 5182900 118 296 122 287 231 231 175 238 1 DAFLGSFLYEYSR CKNYQEAKDAFLGSFL SFLYEYSRRHPEYAVS K D A S R R 1 1 0 1 0 0 1 1 0 0 2 0 0 2 0 2 0 0 2 0 0 0 13 0 1566.7355 CON__P02769 CON__P02769 347 359 yes yes 2 0.0046601 71.555 By MS/MS By MS/MS 2 1 4746000 2388100 2357900 + 119 201 123 288;289;290 232;233 233 2 DAGGPRPESPVPAGR ________________ ESPVPAGRASLEEPPD R D A G R A 2 2 0 1 0 0 1 3 0 0 0 0 0 0 4 1 0 0 0 1 0 0 15 1 1461.7324 E9PS47;E9PLE4;Q9BVG9 E9PS47 8 22 PTDSS2 Phosphatidylserine synthase 2 yes no 3 0.0013149 66.201 By MS/MS By MS/MS 1 1 962050 353140 608910 120 269 124 291;292 234;235 235 208 2 DAGVAKGASMRSLR LAGVVSGRDAGVAKGA GASMRSLRVLNCQGKG R D A L R V 3 2 0 1 0 0 0 2 0 0 1 1 1 0 0 2 0 0 0 1 0 0 14 2 1417.746 Q8NBP7 Q8NBP7 238 251 PCSK9 Proprotein convertase subtilisin/kexin type 9 yes yes 2 0.0086806 45.598 By MS/MS 1 318330 318330 0 121 695 125 293 236 236 547;548 1 DAPTSPASVASSSSTPSSK DKARSLKKDAPTSPAS SSSTPSSKTKDLGHND K D A S K T 3 0 0 1 0 0 0 0 0 0 0 1 0 0 3 8 2 0 0 1 0 0 19 0 1762.8221 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 282 300 TLE3 Transducin-like enhancer protein 3 yes no 2 0.0041349 64.244 By matching By MS/MS 1 1 3208300 1553900 1654400 122 297 126 294;295 237 237 239;742 1 DASIVGFFDDSFSEAHSEFLK FKKFISDKDASIVGFF EAHSEFLKAASNLRDN K D A L K A 2 0 0 3 0 0 2 1 1 1 1 1 0 4 0 4 0 0 0 1 0 0 21 0 2347.0645 P30101 P30101 153 173 PDIA3 Protein disulfide-isomerase A3 yes yes 3 3.6977E-61 141.86 By MS/MS By MS/MS 1 1 10132000 4866400 5266000 123 547 127 296;297 238;239 239 1 DDDYAGFVFGYQSSSR TFFINTERDDDYAGFV FGYQSSSRFYVVMWKQ R D D S R F 1 1 0 3 0 1 0 2 0 0 0 0 0 2 0 3 0 0 2 1 0 0 16 0 1812.7591 CON__Q28194;P07996;P35442 CON__Q28194 1019 1034 THBS1;THBS2 Thrombospondin-1;Thrombospondin-2 no no 2 0.011321 51.726 By MS/MS By matching 1 1 536570 226210 310360 + 124 205;550 128 298;299 240 240 1 DEEEWENTEAVMKNK LELMKLIRDEEEWENT TEAVMKNKEKPSGRGR R D E N K E 1 0 2 1 0 0 5 0 0 0 0 2 1 0 0 0 1 1 0 1 0 0 15 1 1850.7993 Q96PV4 Q96PV4 327 341 PNMA5 Paraneoplastic antigen-like protein 5 yes yes 2 0.012261 45.161 By matching By MS/MS 1 1 3908300 2519400 1388900 125 727 129 300;301 241 241 104;105 94 841 1 DEILPTTPISEQK HVSIVEPKDEILPTTP TTPISEQKGGKPEPPA K D E Q K G 0 0 0 1 0 1 2 0 0 2 1 1 0 0 2 1 2 0 0 0 0 0 13 0 1469.7613 E9PPU1;H0YEU2;E9PL09;P23396;E9PSF4 E9PPU1 130 142 RPS3 40S ribosomal protein S3 yes no 2 0.0024576 89.013 By MS/MS By MS/MS 1 1 14540000 6883400 7656700 126 267 130 302;303 242;243 242 735 2 DELILEGNDIELVSNSAALIQQATTVK RPVSQAQKDELILEGN IQQATTVKNKDIRKFL K D E V K N 3 0 2 2 0 2 3 1 0 3 4 1 0 0 0 2 2 0 0 2 0 0 27 0 2883.5077 D6RAN4;H0Y9V9;P32969;H0Y9R4 D6RAN4 137 163 RPL9 60S ribosomal protein L9 yes no 3 4.4564E-17 83.236 By MS/MS By MS/MS 1 1 16805000 5067900 11737000 127 212 131 304;305 244;245;246 244 3 DFQEYVEPGEDFPASPQRR NVLLLVIRDFQEYVEP FPASPQRRNTASQEDK R D F R R N 1 2 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 19 1 2266.0291 E9PHI6;Q9Y6G9;C9JGM7 E9PHI6 77 95 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 3 0.0022854 56.906 By MS/MS By matching 1 1 2431700 1022800 1408900 128 255 132 306;307 247;248 248 194 2 DGDDVIIIGVFK KQVQEFLKDGDDVIII VIIIGVFKGESDPAYQ K D G F K G 0 0 0 3 0 0 0 2 0 3 0 1 0 1 0 0 0 0 0 2 0 0 12 0 1289.6867 P13667 P13667 302 313 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.0054632 72.643 By MS/MS By matching 1 1 977920 510200 467730 129 521 133 308;309 249 249 1 DGQDAIAQSPEKESK DSEASKPKDGQDAIAQ QSPEKESKDYEMNANH K D G S K D 2 0 0 2 0 2 2 1 0 1 0 2 0 0 1 2 0 0 0 0 0 0 15 1 1601.7533 Q9NWH9;H0YL55;H7BXE3 Q9NWH9 281 295 SLTM SAFB-like transcription modulator yes no 2 0.0016206 89.502 By MS/MS By matching 1 1 1385300 371940 1013400 130 764 134 310;311 250 250 622 1 DGQVINETSQHHDDLE LIKTVETRDGQVINET SQHHDDLE________ R D G L E - 0 0 1 3 0 2 2 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 16 0 1835.7922 P08670 P08670 451 466 VIM Vimentin yes yes 3 0.00060121 71.98 By MS/MS By MS/MS 1 1 3262300 1468800 1793500 131 507 135 312;313 251;252 251 2 DGWHSWPIAHQWPQGPSAVDAAFSWEEK YWRLDTSRDGWHSWPI AAFSWEEKLYLVQGTQ R D G E K L 4 0 0 2 0 2 2 2 2 1 0 1 0 1 3 3 0 4 0 1 0 0 28 0 3218.4635 P02790 P02790 290 317 HPX Hemopexin yes yes 4 5.9398E-31 99.148 By MS/MS By MS/MS 1 1 7391900 3496100 3895700 132 488 136 314;315 253;254;255 253 3 DHSPTPSVFNSDEER TRERERERDHSPTPSV VFNSDEERYRYREYAE R D H E R Y 0 1 1 2 0 0 2 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 15 0 1715.7387 Q6UN15 Q6UN15 490 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 2;3 0.00030826 83.856 By MS/MS By MS/MS 1 2 2286800 540100 1746700 133 667 137 316;317;318 256;257;258;259 258 518;828 4 DHSPTPSVFNSDEERYR TRERERERDHSPTPSV NSDEERYRYREYAERG R D H Y R Y 0 2 1 2 0 0 2 0 1 0 0 0 0 1 2 3 1 0 1 1 0 0 17 1 2034.9031 Q6UN15 Q6UN15 490 506 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 3 0.0079121 42.958 By MS/MS By matching 1 1 1366400 829130 537220 134 667 138 319;320 260 260 518;828;944 1 DIEQVPQQPTYVQALFDFDPQEDGELGFR RNQQIFLRDIEQVPQQ EDGELGFRRGDFIHVM R D I F R R 1 1 0 4 0 5 3 2 0 1 2 0 0 3 3 0 1 0 1 2 0 0 29 0 3380.5837 P62993 P62993 150 178 GRB2 Growth factor receptor-bound protein 2 yes yes 3 0.00014378 51.963 By MS/MS By MS/MS 1 1 20277000 9498500 10779000 135 582 139 321;322 261;262 261 2 DIIRQPSEEEIIK IPSAKKYKDIIRQPSE PSEEEIIKLAPPPKKA K D I I K L 0 1 0 1 0 1 3 0 0 4 0 1 0 0 1 1 0 0 0 0 0 0 13 1 1568.841 B1AKZ5;Q15121 B1AKZ5 88 100 PEA15 Astrocytic phosphoprotein PEA-15 yes no 2 0.0039942 80.706 By MS/MS By MS/MS 1 1 7057300 3580300 3476900 136 139 140 323;324 263;264 263 113 2 DILIVVGNEIIEAPMAWR GLYSAMPRDILIVVGN IEAPMAWRSRFFEYRA R D I W R S 2 1 1 1 0 0 2 1 0 4 1 0 1 0 1 0 0 1 0 2 0 0 18 0 2038.0921 H0YMX4;P50440 H0YMX4 97 114 GATM Glycine amidinotransferase, mitochondrial yes no 2;3 1.4269E-10 101.3 By MS/MS By MS/MS 2 2 64813000 31588000 33225000 137 371 141 325;326;327;328 265;266;267;268 268 38 4 DILLEQSLQSHKK INCHKVVRDILLEQSL QSLQSHKKLKLTKMRA R D I K K L 0 0 0 1 0 2 1 0 1 1 3 2 0 0 0 2 0 0 0 0 0 0 13 1 1537.8464 F5H4E5;Q5HYC2 F5H4E5 595 607 KIAA2026 Uncharacterized protein KIAA2026 yes no 2 0.0059951 59.426 By MS/MS 1 0 0 0 138 291 142 329 269 269 172;173 233 1 DINSLYDVSR LERYNMERDINSLYDV NSLYDVSRMYVDPSEI R D I S R M 0 1 1 2 0 0 0 0 0 1 1 0 0 0 0 2 0 0 1 1 0 0 10 0 1180.5724 A0A0A0MRF9;P16885 A0A0A0MRF9 748 757 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 2 0.011454 52.79 By matching By MS/MS 1 1 618510 248760 369750 139 55 143 330;331 270 270 865 1 DISGPSPSKK FVCDINEKDISGPSPS SGPSPSKKLKKSQCTP K D I K K L 0 0 0 1 0 0 0 1 0 1 0 2 0 0 2 3 0 0 0 0 0 0 10 1 1014.5346 S4R3D6;Q96GX9 S4R3D6 35 44 APIP Methylthioribulose-1-phosphate dehydratase yes no 2 0.011759 57.225 By matching By MS/MS 1 1 897710 435290 462420 140 720 144 332;333 271;272 272 574 2 DITKKSLHMNLQNIIDFVR RLRAVVFRDITKKSLH QNIIDFVRSRITNMSK R D I V R S 0 1 2 2 0 1 0 0 1 3 2 2 1 1 0 1 1 0 0 1 0 0 19 2 2284.2362 H0Y9N9 H0Y9N9 99 117 LRBA yes yes 3 0.012759 41.412 By MS/MS 1 0 0 0 141 351 145 334 273 273 45;46 1 DKIFLLYEQAQEEITRLR VKVLKSERDKIFLLYE QEEITRLRREMMKSCK R D K L R R 1 2 0 1 0 2 3 0 0 2 3 1 0 1 0 0 1 0 1 0 0 0 18 2 2264.2165 B8ZZZ9;F8WA32;Q9BZW7 B8ZZZ9 62 79 TSGA10 Testis-specific gene 10 protein yes no 2 0.010159 50.562 By MS/MS 1 0 0 0 142 168 146 335 274 274 151 713 1 DKIHTTPDTPEIRQVK RELYHKLKDKIHTTPD TPEIRQVKKTQEAVSE K D K V K K 0 1 0 2 0 1 1 0 1 2 0 2 0 0 2 0 3 0 0 1 0 0 16 2 1877.0007 H0Y786;A0A087X1N7;P20929 H0Y786 1461 1476 NEB Nebulin yes no 2 0.012556 41.283 By MS/MS 1 0 0 0 143 47 147 336 275 275 680;681;682 1 DLDEEGSEKELHENVLDK FEENGLEKDLDEEGSE LHENVLDKELEENDSE K D L D K E 0 0 1 3 0 0 5 1 1 0 3 2 0 0 0 1 0 0 0 1 0 0 18 1 2097.9702 O43719 O43719 573 590 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.00015303 76.158 By matching By MS/MS 1 1 2312100 990340 1321800 144 448 148 337;338 276 276 361 1 DLDSQTMMVLVNYIFFK GKITDLIKDLDSQTMM LVNYIFFKAKWEMPFD K D L F K A 0 0 1 2 0 1 0 0 0 1 2 1 2 2 0 1 1 0 1 2 0 0 17 0 2063.0108 G3V595;P01011 G3V595 198 214 SERPINA3 Alpha-1-antichymotrypsin;Alpha-1-antichymotrypsin His-Pro-less yes no 2 2.7545E-48 140.24 By MS/MS By MS/MS 1 1 26522000 9662200 16860000 145 326 149 339;340 277;278;279 279 34;35 3 DLEIEVVLFHPNYNINGK VSVGGEKRDLEIEVVL PNYNINGKKEAGIPEF R D L G K K 0 0 3 1 0 0 2 1 1 2 2 1 0 1 1 0 0 0 1 2 0 0 18 0 2113.0844 A0A0G2JH38;E7ETN3;B4E1Z4;P00751;H7C5H1 A0A0G2JH38 547 564 CFB Complement factor B;Complement factor B Ba fragment;Complement factor B Bb fragment yes no 2;3 2.8783E-75 153.24 By MS/MS By MS/MS 1 3 14144000 2234500 11910000 146 82 150;151 341;342;343;344 280;281;282;283 283 11 4 DLEVVAATPTSLLISWDAPAVTVR STVSDVPRDLEVVAAT DAPAVTVRYYRITYGE R D L V R Y 4 1 0 2 0 0 1 0 0 1 3 0 0 0 2 2 3 1 0 4 0 0 24 0 2523.3585 P02751;H0Y7Z1 P02751 1453 1476 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 2;3 2.3923E-86 146.2 By MS/MS By MS/MS 2 2 62521000 19373000 43148000 147 485 152 345;346;347;348 284;285;286;287;288 287 5 DLGTNAQITYSYSQK AAVQAVDKDLGTNAQI ITYSYSQKVPQASKDL K D L Q K V 1 0 1 1 0 2 0 1 0 1 1 1 0 0 0 2 2 0 2 0 0 0 15 0 1687.8053 Q8N6Y1 Q8N6Y1 348 362 PCDH20 Protocadherin-20 yes yes 3 0.0098958 45.79 By MS/MS 1 0 0 0 148 692 153 349 289 289 97;229 544;545;835 1 DLKPETEYVVNVYSVVEDEYSEPLKGTEK METSTVLKDLKPETEY EPLKGTEKTLPVPVVS K D L E K T 0 0 1 2 0 0 6 1 0 0 2 3 0 0 2 2 2 0 3 5 0 0 29 2 3358.6344 D6RGG3;Q99715;A0A087X0A8;H0Y4P7 D6RGG3 1443 1471 COL12A1 Collagen alpha-1(XII) chain yes no 4 0.010387 31.632 By MS/MS 1 2202600 2202600 0 149 218 154 350 290 290 1 DLLIAYYDVDYEK NKDLIQGKDLLIAYYD YYDVDYEKNAKGSNYW K D L E K N 1 0 0 3 0 0 1 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 13 0 1618.7767 P30101 P30101 259 271 PDIA3 Protein disulfide-isomerase A3 yes yes 2 0.0015733 87.298 By MS/MS By MS/MS 3 3 16198000 6577300 9620800 150 547 155 351;352;353;354;355;356 291;292;293;294;295;296;297 295 7 DLQFVEVTDVK SDTVPSPRDLQFVEVT FVEVTDVKVTIMWTPP R D L V K V 0 0 0 2 0 1 1 0 0 0 1 1 0 1 0 0 1 0 0 3 0 0 11 0 1291.666 P02751 P02751 912 922 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 0.0059016 76.143 By MS/MS By MS/MS 1 1 1401600 608920 792680 151 485 156 357;358 298;299 298 2 DLQVSETAETSLTLLWK ATELDTPKDLQVSETA TSLTLLWKTPLAKFDR K D L W K T 1 0 0 1 0 1 2 0 0 0 4 1 0 0 0 2 3 1 0 1 0 0 17 0 1933.0044 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 990 1006 TNC Tenascin yes no 2;3 6.9345E-23 121.45 By MS/MS By MS/MS 14 18 43183000 20600000 22583000 152 246 157 359;360;361;362;363;364;365;366;367;368;369;370;371;372;373;374;375;376;377;378;379;380;381;382;383;384;385;386;387;388;389;390 300;301;302;303;304;305;306;307;308;309;310;311;312;313;314;315;316;317;318;319;320;321;322;323;324;325;326;327;328 321 24 DLTHSDSESSLHMSDR QHGLGSQRDLTHSDSE SSLHMSDRQRVAPKPP R D L D R Q 0 1 0 3 0 0 1 0 2 0 2 0 1 0 0 5 1 0 0 0 0 0 16 0 1815.7694 H0YDB2;E9PNJ4;Q13586 H0YDB2 277 292 STIM1 Stromal interaction molecule 1 yes no 3 0.0010538 69.258 By MS/MS By MS/MS 1 1 694980 319810 375170 153 273 158 391;392 329;330 330 210 2 DLTYQVVLGEYNLAVK TAGHCISRDLTYQVVL GEYNLAVKEGPEQVIP R D L V K E 1 0 1 1 0 1 1 1 0 0 3 1 0 0 0 0 1 0 2 3 0 0 16 0 1823.9669 B1AQ52;P09093 B1AQ52 78 93 CELA3A Chymotrypsin-like elastase family member 3A yes no 2 9.4311E-13 108.72 By matching By MS/MS 1 1 7731300 2868700 4862600 154 141 159 393;394 331 331 1 DLVQPDKPASPK SGHLMQTRDLVQPDKP PDKPASPKFIVTLDGV R D L P K F 1 0 0 2 0 1 0 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 12 1 1293.6929 G3V4R5;G3V411;H0YJA2;Q6PJT7 G3V4R5 183 194 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 2 9.0987E-06 114.7 By MS/MS By MS/MS 1 1 4338500 1867300 2471100 155 322 160 395;396 332;333 333 261 2 DLVVTEVTEETVNLAWDNEMR CSEVSPPKDLVVTEVT LAWDNEMRVTEYLVVY K D L M R V 1 1 2 2 0 0 4 0 0 0 2 0 1 0 0 0 3 1 0 4 0 0 21 0 2462.1635 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 628 648 TNC Tenascin yes no 2;3 0.0012034 70.26 By matching By MS/MS 1 2 19326000 6965800 12360000 156 246 161 397;398;399 334;335 334 30 2 DLYFEGGVSSVYLWDLDHGFAGVILIK NNAFDQYRDLYFEGGV FAGVILIKKAGDGSKK R D L I K K 1 0 0 3 0 0 1 4 1 2 4 1 0 2 0 2 0 1 2 3 0 0 27 0 3012.5273 B1AK87;B1AK85;B1AK88;P47756 B1AK87 97 123 CAPZB F-actin-capping protein subunit beta yes no 3 9.6256E-07 63.398 By matching By MS/MS 1 1 13774000 4746000 9027900 157 137 162 400;401 336 336 1 DLYLASVFHATAFELDTDGNPFDQDIYGR LSRMSGKKDLYLASVF FDQDIYGREELRSPKL K D L G R E 3 1 1 5 0 1 1 2 1 1 3 0 0 3 1 1 2 0 2 1 0 0 29 0 3289.5204 E9PKH2;P50454 E9PKH2 128 156 SERPINH1 Serpin H1 yes no 3 1.663E-07 66.793 By MS/MS By MS/MS 1 1 9944400 4013100 5931400 158 266 163 402;403 337;338 337 2 DNFHGLAIFLDTYPNDETTER PGPVFGSKDNFHGLAI PNDETTERVFPYISVM K D N E R V 1 1 2 3 0 0 2 1 1 1 2 0 0 2 1 0 3 0 1 0 0 0 21 0 2467.1292 D6RIU4;D6RBV2;Q12907 D6RIU4 81 101 LMAN2 Vesicular integral-membrane protein VIP36 yes no 3 0.0068481 48.354 By matching By MS/MS 1 1 3069000 948380 2120600 159 213 164 404;405 339 339 1 DPAQPMSPGEATQSGAR ________________ EATQSGARPADRYGLL R D P A R P 3 1 0 1 0 2 1 2 0 0 0 0 1 0 3 2 1 0 0 0 0 0 17 0 1698.7631 Q9BQG0 Q9BQG0 5 21 MYBBP1A Myb-binding protein 1A yes yes 2 0.0040881 46.378 By MS/MS By matching 1 1 952580 443140 509440 160 733 165 406;407 340 340 583 0 DPHEWLDKSWLK HSLMTSKRDPHEWLDK WLDKSWLKVSPSEEEM R D P L K V 0 0 0 2 0 0 1 0 1 0 2 2 0 0 1 1 0 2 0 0 0 0 12 1 1552.7674 A6PVK7;Q5VXU9 A6PVK7 951 962 C9orf84 Uncharacterized protein C9orf84 yes no 2 0.01013 60.828 By MS/MS 1 1218000 0 1218000 161 126 166 408 341 341 1 DQDLFVQNCAALSSGAFWFR QKFSTFDRDQDLFVQN SSGAFWFRSCHFANLN R D Q F R S 3 1 1 2 1 2 0 1 0 0 2 0 0 3 0 2 0 1 0 1 0 0 20 0 2331.0743 K7ES70;P55083 K7ES70 216 235 MFAP4 Microfibril-associated glycoprotein 4 yes no 2 3.0912E-29 141 By MS/MS By MS/MS 1 1 12952000 6648300 6304200 162 428 167 409;410 342;343 343 2 DQEPKPSPEPAAVSR GGGELDKKDQEPKPSP PEPAAVSRGGGGEPGA K D Q S R G 2 1 0 1 0 1 2 0 0 0 0 1 0 0 4 2 0 0 0 1 0 0 15 1 1606.7951 Q9H7S9 Q9H7S9 246 260 ZNF703 Zinc finger protein 703 yes yes 3 0.012216 47.204 By MS/MS By matching 1 1 1473500 721780 751760 163 755 168 411;412 344 344 612 1 DQVANSAFVER YYITGETKDQVANSAF ANSAFVERLRKHGLEV K D Q E R L 2 1 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1234.5942 P07900 P07900 500 510 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.0023346 86.898 By MS/MS 1 378470 378470 0 164 502 169 413 345 345 1 DRSGVNSWQVHVVLLPGK RAQGLPDKDRSGVNSW HVVLLPGKKHRGRTNI K D R G K K 0 1 1 1 0 1 0 2 1 0 2 1 0 0 1 2 0 1 0 4 0 0 18 1 1990.0748 Q17RD7 Q17RD7 381 398 SYT16 Synaptotagmin-16 yes yes 2 0.010035 50.149 By MS/MS 1 0 0 0 165 633 170 414 346 346 88 490 1 DRTPPLLYR PDPLRGARDRTPPLLY RTPPLLYRDRDRDLYP R D R Y R D 0 2 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 1 0 0 0 9 1 1129.6244 A0A087WWP4;Q96T37 A0A087WWP4 522 530 RBM15 Putative RNA-binding protein 15 yes no 2 2.1451E-10 135.8 By matching By MS/MS 1 1 2860000 1396400 1463600 166 29 171 415;416 347 347 676 1 DRVGQGWSYSAVQDIPARR NGHNVWARDRVGQGWS VQDIPARRNPRLVPYR R D R R R N 2 3 0 2 0 2 0 2 0 1 0 0 0 0 1 2 0 1 1 2 0 0 19 2 2160.0824 P21817 P21817 998 1016 RYR1 Ryanodine receptor 1 yes yes 3 0.010931 40.602 By MS/MS By matching 1 1 1598000 972580 625410 167 539 172 417;418 348 348 207 1 DSFSHSPGAVSSLK LSRSDVFRDSFSHSPG PGAVSSLKVFTGLAAP R D S L K V 1 0 0 1 0 0 0 1 1 0 1 1 0 1 1 5 0 0 0 1 0 0 14 0 1417.6838 Q9H6R7 Q9H6R7 685 698 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes yes 3 0.003787 59.15 By matching By MS/MS 1 1 528020 190990 337030 168 753 173 419;420 349 349 610 1 DSPVLIDFFEDTER SSALANTKDSPVLIDF DFFEDTERYRKQANKA K D S E R Y 0 1 0 3 0 0 2 0 0 1 1 0 0 2 1 1 1 0 0 1 0 0 14 0 1681.7835 P04196 P04196 140 153 HRG Histidine-rich glycoprotein yes yes 2 7.9565E-54 152.85 By MS/MS 1 2333600 0 2333600 169 490 174 421 350 350 1 DSWEDIFELLFWGR EHFAMMQRDSWEDIFE FELLFWGRTSAGTRQP R D S G R T 0 1 0 2 0 0 2 1 0 1 2 0 0 2 0 1 0 2 0 0 0 0 14 0 1811.8519 P04004 P04004 311 324 VTN Vitronectin;Vitronectin V65 subunit;Vitronectin V10 subunit;Somatomedin-B yes yes 2 1.0651E-40 143.94 By matching By MS/MS 1 1 3950300 808970 3141400 170 489 175 422;423 351 351 386 1 DTDGGPKEEESPV AAESPDQKDTDGGPKE PKEEESPV________ K D T P V - 0 0 0 2 0 0 3 2 0 0 0 1 0 0 2 1 1 0 0 1 0 0 13 1 1358.5838 P53985 P53985 488 500 SLC16A1 Monocarboxylate transporter 1 yes yes 2 0.010008 49.31 By MS/MS 1 0 0 0 171 573 176 424 352 352 445 1 DTILNINFQCAYPLDMK LVNDFIIRDTILNINF CAYPLDMKVSLQAALQ R D T M K V 1 0 2 2 1 1 0 0 0 2 2 1 1 1 1 0 1 0 1 0 0 0 17 0 2054.9805 P55259 P55259 311 327 GP2 Pancreatic secretory granule membrane major glycoprotein GP2 yes yes 2 0.00053481 81.565 By MS/MS By MS/MS 1 1 6685700 3292800 3392900 172 574 177 425;426 353;354 353 71 2 DTISYTELDFELIK VRIDIMEKDTISYTEL ELDFELIKVEVKEMEK K D T I K V 0 0 0 2 0 0 2 0 0 2 2 1 0 1 0 1 2 0 1 0 0 0 14 0 1685.84 Q6UX06 Q6UX06 147 160 OLFM4 Olfactomedin-4 yes yes 2 3.2844E-143 174.4 By MS/MS By MS/MS 1 1 58038000 17295000 40742000 173 668 178 427;428 355;356;357 355 3 DTTPLNVLCSPGIQVVSVGIK DGRSDTQRDTTPLNVL QVVSVGIKDVFDFIPG R D T I K D 0 0 1 1 1 1 0 2 0 2 2 1 0 0 2 2 2 0 0 4 0 0 21 0 2196.1824 A0A087X0S5;P12109 A0A087X0S5 735 755 COL6A1 Collagen alpha-1(VI) chain yes no 2;3 0.0044205 57.794 By MS/MS By MS/MS 2 2 9161900 4292400 4869600 174 43 179 429;430;431;432 358;359;360 358 2 DTTVISHSPNTSYDTALEAR AATVAAQRDTTVISHS YDTALEARIQKEEEEI R D T A R I 2 1 1 2 0 0 1 0 1 1 1 0 0 0 1 3 4 0 1 1 0 0 20 0 2177.0237 Q4VCS5;A6NP16;E7ERM3 Q4VCS5 707 726 AMOT Angiomotin yes no 3 0.0012378 63.302 By MS/MS By MS/MS 1 1 20190000 8414100 11776000 175 637 180 433;434 361;362 361 492 2 DVDFMYVELIQR PCKVINAKDVDFMYVE MYVELIQRCKQMFLTQ K D V Q R C 0 1 0 2 0 1 1 0 0 1 1 0 1 1 0 0 0 0 1 2 0 0 12 0 1526.7439 P78527 P78527 380 391 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.014493 67.334 By MS/MS By matching 1 1 609110 304720 304390 176 585 181 435;436 363 363 76 1 DVFDFIPGSDQLNVISCQGLAPSQGR QVVSVGIKDVFDFIPG GLAPSQGRPGLSLVKE K D V G R P 1 1 1 3 1 3 0 3 0 2 2 0 0 2 2 3 0 0 0 2 0 0 26 0 2819.3548 A0A087X0S5;P12109 A0A087X0S5 756 781 COL6A1 Collagen alpha-1(VI) chain yes no 3 0.0012209 48.759 By MS/MS 1 4585200 0 4585200 177 43 182 437 364 364 1 DVFLGMFLYEYAR CKNYAEAKDVFLGMFL MFLYEYARRHPDYSVV K D V A R R 1 1 0 1 0 0 1 1 0 0 2 0 1 2 0 0 0 0 2 1 0 0 13 0 1622.7803 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;C9JKR2 A0A0C4DGB6 348 360 ALB Serum albumin yes no 2 4.9445E-52 150.46 By MS/MS By MS/MS 12 13 526010000 256230000 269780000 + 178 77 183;184 438;439;440;441;442;443;444;445;446;447;448;449;450;451;452;453;454;455;456;457;458;459;460;461;462 365;366;367;368;369;370;371;372;373;374;375;376;377;378;379;380;381;382;383;384;385;386 369 13 22 DVNAAIATIK YRGDVVPKDVNAAIAT NAAIATIKTKRSIQFV K D V I K T 3 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 10 0 1014.571 P68363;F5H5D3;Q9BQE3;Q71U36;Q6PEY2;Q13748 P68363 327 336 TUBA1B;TUBA1C;TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2 0.00938 70.816 By MS/MS By MS/MS 1 1 922800 362420 560380 179 584 185 463;464 387;388 388 2 DVQLEGGCNYDYIEVFDGPYR YRVTVIFRDVQLEGGC EVFDGPYRSSPLIARV R D V Y R S 0 1 1 3 1 1 2 3 0 1 1 0 0 1 1 0 0 0 3 2 0 0 21 0 2508.0904 Q9UGM3 Q9UGM3 2052 2072 DMBT1 Deleted in malignant brain tumors 1 protein yes yes 2;3 1.5801E-28 110.38 By MS/MS By MS/MS 2 2 20092000 9838700 10254000 180 773 186 465;466;467;468 389;390;391 389 3 DVTVTAIGIGDMFHEK NLRALCDRDVTVTAIG IGDMFHEKHESENLYS R D V E K H 1 0 0 2 0 0 1 2 1 2 0 1 1 1 0 0 2 0 0 2 0 0 16 0 1731.8502 P12110 P12110 751 766 COL6A2 Collagen alpha-2(VI) chain yes yes 3 0.0051124 46.68 By MS/MS 1 301600 0 301600 181 520 187 469 392 392 63 1 DVVFLIDGSQSAGPEFQYVR SPGVGGKRDVVFLIDG GPEFQYVRTLIERLVD R D V V R T 1 1 0 2 0 2 1 2 0 1 1 0 0 2 1 2 0 0 1 3 0 0 20 0 2226.0957 E7ENL6;P12111 E7ENL6 626 645 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 2.9719E-11 95.631 By MS/MS By MS/MS 2 2 8953300 4466500 4486900 182 227 188 470;471;472;473 393;394;395 393 3 DVVLSIVNDLTIAESNCPR QDTFGRMRDVVLSIVN IAESNCPRGARVAVVT R D V P R G 1 1 2 2 1 0 1 0 0 2 2 0 0 0 1 2 1 0 0 3 0 0 19 0 2114.0678 E7ENL6;P12111 E7ENL6 1815 1833 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 6.8712E-17 106.55 By MS/MS By MS/MS 2 3 19235000 6896500 12338000 183 227 189 474;475;476;477;478 396;397;398;399 396 4 DYCQVSGSKLR ARNKIIGKDYCQVSGS QVSGSKLRDDTHQHQE K D Y L R D 0 1 0 1 1 1 0 1 0 0 1 1 0 0 0 2 0 0 1 1 0 0 11 1 1311.6241 CON__Q86YZ3;Q86YZ3 CON__Q86YZ3 92 102 HRNR Hornerin yes no 3 0.01117 51.276 By matching By MS/MS 1 1 215130 103700 111430 + 184 206 190 479;480 400 400 162 1 DYDSLAQPGFFDR RAAVFHEKDYDSLAQP AQPGFFDRFIRWIC__ K D Y D R F 1 1 0 3 0 1 0 1 0 0 1 0 0 2 1 1 0 0 1 0 0 0 13 0 1529.6787 P12110 P12110 1001 1013 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.01007 59.426 By matching By MS/MS 1 1 1349700 671310 678400 185 520 191 481;482 401 401 1 EAALPPVSPLK RGRDAVKREAALPPVS LPPVSPLKAALSEEEL R E A L K A 2 0 0 0 0 0 1 0 0 0 2 1 0 0 3 1 0 0 0 1 0 0 11 0 1120.6492 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1061 1071 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 2.8256E-17 138.42 By MS/MS By MS/MS 1 1 3466400 1600300 1866100 186 241 192 483;484 402;403;404;405;406 404 186 5 EADSSSDYVNMDFTK QKPTHEQREADSSSDY YVNMDFTKRESNTPAP R E A T K R 1 0 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 15 0 1707.6934 O14654 O14654 914 928 IRS4 Insulin receptor substrate 4 yes yes 2 0.00082881 71.176 By MS/MS By MS/MS 2 2 3698500 1544400 2154100 187 441 193;194 485;486;487;488 407;408;409 409 48 913 3 EADSSSDYVNMDFTKR QKPTHEQREADSSSDY VNMDFTKRESNTPAPS R E A K R E 1 1 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 16 1 1863.7945 O14654 O14654 914 929 IRS4 Insulin receptor substrate 4 yes yes 3 0.00037428 66.059 By MS/MS By MS/MS 2 2 6761100 3471000 3290100 188 441 195;196 489;490;491;492 410;411 410 48 913 2 EAEAAIYHLQLFEELR RMQHLIAREAEAAIYH LQLFEELRRLAPITSD R E A L R R 3 1 0 0 0 1 4 0 1 1 3 0 0 1 0 0 0 0 1 0 0 0 16 0 1930.9789 B4DNK4;P14618 B4DNK4 310 325 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 3 7.3126E-19 124.62 By MS/MS By MS/MS 1 1 3637300 1527600 2109700 189 148 197 493;494 412;413 413 2 EAEALLQLNGDFLVR FHGKLSRREAEALLQL LNGDFLVRESTTTPGQ R E A V R E 2 1 1 1 0 1 2 1 0 0 4 0 0 1 0 0 0 0 0 1 0 0 15 0 1686.8941 H0Y539;X6R6D0;P29353 H0Y539 161 175 SHC1 SHC-transforming protein 1 yes no 2 2.221E-10 105.2 By MS/MS By MS/MS 1 1 3492300 1908700 1583600 190 341 198 495;496 414;415 415 2 EALDALHQAQK RSRAQKRREALDALHQ DALHQAQKLQAMLQEL R E A Q K L 3 0 0 1 0 2 1 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 11 0 1222.6306 Q9NRC6 Q9NRC6 2464 2474 SPTBN5 Spectrin beta chain, non-erythrocytic 5 yes yes 2 0.0087284 56.432 By MS/MS By matching 1 1 810490 370470 440030 191 759 199 497;498 416 416 245;246 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK AGASPVEKEAPAEGEA ASSTSSPKAEDGATPS K E A P K A 10 0 0 0 0 0 6 3 0 0 0 1 0 0 4 6 2 0 0 0 0 0 32 0 2914.2952 P29966 P29966 106 137 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 2.2944E-17 76.557 By MS/MS By MS/MS 1 1 15786000 6487200 9299100 192 546 200 499;500 417;418;419 419 419;798 3 EAQESGSQRGTAR SCPDSETREAQESGSQ GSQRGTARELRPTPEP R E A A R E 2 2 0 0 0 2 2 2 0 0 0 0 0 0 0 2 1 0 0 0 0 0 13 1 1375.644 A0A0J9YYJ7;A0A0J9YW50;A0A0J9YY01 A0A0J9YYJ7 166 178 yes no 2 0.012954 40.015 By matching By MS/MS 1 1 671710 199740 471970 193 89 201 501;502 420 420 135;136 1 EATRDLLSFIDSASSNIK GAEGGDVREATRDLLS DSASSNIKLALDKPGK R E A I K L 2 1 1 2 0 0 1 0 0 2 2 1 0 1 0 4 1 0 0 0 0 0 18 1 1966.0007 A6NEQ2 A6NEQ2 61 78 FAM181B Protein FAM181B yes yes 2 0.013553 40.577 By MS/MS 1 0 0 0 194 123 202 503 421 421 90;91;92;93;700 1 EAYEQLLQTENLSAQVK QRKYHSAKEAYEQLLQ ENLSAQVKATVLQQLG K E A V K A 2 0 1 0 0 3 3 0 0 0 3 1 0 0 0 1 1 0 1 1 0 0 17 0 1962.9898 F5H5V6;F5H6S1;F8W8R6;A0A087X0R0;O15550 F5H5V6 202 218 KDM6A Lysine-specific demethylase 6A yes no 2 0.010794 43.798 By MS/MS 1 0 0 0 195 42 203 504 422 422 123;124 679 1 EDGGGWWYNR DPRKQCSKEDGGGWWY GGGWWYNRCHAANPNG K E D N R C 0 1 1 1 0 0 1 3 0 0 0 0 0 0 0 0 0 2 1 0 0 0 10 0 1238.5105 D6REL8;P02675;CON__P02676 D6REL8 208 217 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 2 0.0035385 86.833 By MS/MS By MS/MS 1 1 1723800 848540 875280 + 196 216 204 505;506 423;424 423 2 EDGNEEDKENQGDETQGQQPPQR PPRQRQPREDGNEEDK QGQQPPQRRYRRNFNY R E D Q R R 0 1 2 3 0 5 5 3 0 0 0 1 0 0 2 0 1 0 0 0 0 0 23 1 2627.0968 H0Y449;P67809 H0Y449 307 329 YBX1 Nuclease-sensitive element-binding protein 1 yes no 3 0.0084081 43.476 By matching By MS/MS 1 1 1444900 715070 729800 197 337 205 507;508 425 425 1 EDLIWELLNQAQEHFGK VARSMGGKEDLIWELL QAQEHFGKDKSKEFQL K E D G K D 1 0 1 1 0 2 3 1 1 1 3 1 0 1 0 0 0 1 0 0 0 0 17 0 2069.0218 P02787 P02787 279 295 TF Serotransferrin yes yes 3 1.7818E-197 182.37 By MS/MS By MS/MS 1 1 5421100 2765600 2655500 198 487 206 509;510 426;427 427 2 EDQTEYLEER TKVILHLKEDQTEYLE QTEYLEERRVKEVVKK K E D E R R 0 1 0 1 0 1 4 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1310.5626 P08238;G3V2J8;Q58FF6;Q58FF7;P07900 P08238 187 196 HSP90AB1;HSP90AA1;HSP90AB4P;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha no no 2 0.0030109 89.029 By MS/MS By MS/MS 1 1 1309000 434960 874020 199 504;502 207 511;512 428;429 428 2 EDVEVAESPLR SPPLLCTREDVEVAES EVAESPLRVLAETPDS R E D L R V 1 1 0 1 0 0 3 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 11 0 1242.6092 J3KMX1;Q99567 J3KMX1 449 459 NUP88 Nuclear pore complex protein Nup88 yes no 2 1.0929E-05 122.39 By MS/MS By MS/MS 1 1 1674600 625720 1048800 200 407 208 513;514 430;431 430 317 2 EEASDDDMEGDEAVVR EDVYGEVREEASDDDM EGDEAVVRCTLSANLV R E E V R C 2 1 0 4 0 0 4 1 0 0 0 0 1 0 0 1 0 0 0 2 0 0 16 0 1765.6949 O75643 O75643 222 237 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 7.8779E-14 109.07 By MS/MS By MS/MS 2 2 15139000 6108300 9031100 201 460 209;210 515;516;517;518 432;433 433 51 371 2 EEDEEPESPPEKK KEKTPSPKEEDEEPES PESPPEKKTSTSPPPE K E E K K T 0 0 0 1 0 0 6 0 0 0 0 2 0 0 3 1 0 0 0 0 0 0 13 1 1541.6733 Q9H1E3 Q9H1E3 207 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 0.00014192 98.582 By MS/MS 1 766750 0 766750 202 745 211 519 434 434 598 1 EEHGGLIRSPR KPLTRGAKEEHGGLIR GGLIRSPRHEKKKKVR K E E P R H 0 2 0 0 0 0 2 2 1 1 1 0 0 0 1 1 0 0 0 0 0 0 11 1 1249.6527 P26368 P26368 71 81 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 2 0.0042657 87.216 By matching By MS/MS 1 1 3592400 1400300 2192100 203 542 212 520;521 435 435 415 1 EEIVDKYDLFVGSQATDFGEALVR NKDGKLTKEEIVDKYD DFGEALVRHDEF____ K E E V R H 2 1 0 3 0 1 3 2 0 1 2 1 0 2 0 1 1 0 1 3 0 0 24 1 2700.3283 H0Y875;O43852 H0Y875 120 143 CALU Calumenin yes no 3 0.00075826 55.734 By matching By MS/MS 1 1 4099800 1271900 2827900 204 347 213 522;523 436 436 1 EFITGDVEPTDAESEWHSENEEEEK QPLFDKRREFITGDVE SENEEEEKL_______ R E F E K L 1 0 1 2 0 0 9 1 1 1 0 1 0 1 1 2 2 1 0 1 0 0 25 0 2935.2156 E9PS34;E9PNJ7;A8MXH2;E9PKT8;C9J6D1;C9JZI7;Q99733 E9PS34 108 132 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 3 0.00082025 53.342 By MS/MS By MS/MS 1 1 11560000 3944000 7616100 205 131 214 524;525 437;438 437 101;703 2 EGEEPTVYSDEEEPKDESAR HHVGKLLKEGEEPTVY EPKDESARKND_____ K E G A R K 1 1 0 2 0 0 7 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 20 1 2294.9663 O00264 O00264 173 192 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 3.3697E-05 73.688 By matching By MS/MS 1 1 169300000 85407000 83890000 206 433 215 526;527 439 439 341;777;912 1 EGEEPTVYSDEEEPKDESARK HHVGKLLKEGEEPTVY PKDESARKND______ K E G R K N 1 1 0 2 0 0 7 1 0 0 0 2 0 0 2 2 1 0 1 1 0 0 21 2 2423.0612 O00264 O00264 173 193 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 0.0052138 52.185 By matching By MS/MS 1 1 15131000 8508400 6623000 207 433 216 528;529 440 440 341;777;912 1 EGVTPWASFKK TSDGEKKREGVTPWAS TPWASFKKMVTPKKRV R E G K K M 1 0 0 0 0 0 1 1 0 0 0 2 0 1 1 1 1 1 0 1 0 0 11 1 1248.6503 Q02952 Q02952 605 615 AKAP12 A-kinase anchor protein 12 yes yes 2 0.0037837 68.676 By MS/MS By MS/MS 1 1 3107400 1664200 1443200 208 592 217 530;531 441;442 442 455 2 EGYYGYTGAFR NLCEPNNKEGYYGYTG YGYTGAFRCLVEKGDV K E G F R C 1 1 0 0 0 0 1 3 0 0 0 0 0 1 0 0 1 0 3 0 0 0 11 0 1282.5619 P02787;H7C5E8 P02787 531 541 TF Serotransferrin yes no 2 0.0088445 66.435 By MS/MS By matching 1 1 2131300 1028000 1103300 209 487 218 532;533 443 443 1 EHALLAYTLGVK ISKNGQTREHALLAYT LAYTLGVKQLIVGVNK R E H V K Q 2 0 0 0 0 0 1 1 1 0 3 1 0 0 0 0 1 0 1 1 0 0 12 0 1313.7343 Q5VTE0;P68104;A0A087WV01;Q05639 Q5VTE0 135 146 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 yes no 2 0.0018414 82.831 By matching By MS/MS 1 1 473370 198440 274920 210 583 219 534;535 444 444 1 EHASIDAQSGAGVPNPSTSASPK ELEDLVRREHASIDAQ PSTSASPKKSPPPAKD R E H P K K 4 0 1 1 0 1 1 2 1 1 0 1 0 0 3 5 1 0 0 1 0 0 23 0 2207.0455 Q8IXJ6 Q8IXJ6 348 370 SIRT2 NAD-dependent protein deacetylase sirtuin-2 yes yes 3 0.00069075 57.142 By MS/MS By matching 1 1 887310 515090 372220 211 683 220 536;537 445 445 536;832 1 EHIVDLEMLTVSSIGTFR VKSLSGPREHIVDLEM VSSIGTFRTSSVLRLT R E H F R T 0 1 0 1 0 0 2 1 1 2 2 0 1 1 0 2 2 0 0 2 0 0 18 0 2046.0456 A0A0U1RQV3;Q12805 A0A0U1RQV3 247 264 EFEMP1 EGF-containing fibulin-like extracellular matrix protein 1 yes no 3 7.7374E-05 73.953 By MS/MS 1 1871600 0 1871600 212 96 221 538 446 446 18 1 EIAVGDSEGQIVIYDVGEQIAVPR VRWTHSGREIAVGDSE GEQIAVPRNDEWARFG R E I P R N 2 1 0 2 0 2 3 3 0 4 0 0 0 0 1 1 0 0 1 4 0 0 24 0 2556.3071 Q13409 Q13409 584 607 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 3 0.014447 33.187 By MS/MS 1 1801800 0 1801800 213 611 222 539 447 447 0 EIESEIDSEEELINK ELVNWYLKEIESEIDS SEEELINKKRIIEKVI K E I N K K 0 0 1 1 0 0 6 0 0 3 1 1 0 0 0 2 0 0 0 0 0 0 15 0 1775.8313 Q14566 Q14566 755 769 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.0060187 57.347 By MS/MS 1 0 0 0 214 618 223 540 448 448 477 1 EIPSATQSPISK KLEKKDAKEIPSATQS ATQSPISKKRKKKGFL K E I S K K 1 0 0 0 0 1 1 0 0 2 0 1 0 0 2 3 1 0 0 0 0 0 12 0 1256.6612 Q9BQG0;I3L1L3 Q9BQG0 1156 1167 MYBBP1A Myb-binding protein 1A yes no 2 0.0078637 70.889 By matching By MS/MS 1 1 5565200 3153200 2412000 215 733 224 541;542 449 449 584 1 EIQNGNLHESDSESVPR EKKKNKKKEIQNGNLH SDSESVPRDFKLSDAL K E I P R D 0 1 2 1 0 1 3 1 1 1 1 0 0 0 1 3 0 0 0 1 0 0 17 0 1909.8766 Q86UP2 Q86UP2 66 82 KTN1 Kinectin yes yes 2;3 0.0016319 67.299 By MS/MS By MS/MS 4 4 15724000 8325800 7398400 216 680 225;226 543;544;545;546;547;548;549;550 450;451;452;453;454;455 453 95;96;224 532;533;534 6 EISPGSGPGEIR ITEEMNGKEISPGSGP GSGPGEIRKVEPVTQK K E I I R K 0 1 0 0 0 0 2 3 0 2 0 0 0 0 2 2 0 0 0 0 0 0 12 0 1197.599 E9PMV8;H0Y5B0;O43491;E9PMG5;Q6R5J7;E9PK52;E9PHY5 E9PMV8 112 123 EPB41L2 Band 4.1-like protein 2 yes no 2 0.014226 63.216 By MS/MS By matching 1 1 752600 353340 399270 217 272 227 551;552 456 456 209 1 EKENSLEAIRSK AKLMKVIKEKENSLEA SLEAIRSKLDKAEDQH K E K S K L 1 1 1 0 0 0 3 0 0 1 1 2 0 0 0 2 0 0 0 0 0 0 12 2 1402.7416 F5H6A0;J3KP58;P30622;F5H0N7 F5H6A0 628 639 CLIP1 CAP-Gly domain-containing linker protein 1 yes no 2 0.012399 45.022 By matching By MS/MS 1 1 3244200 1840900 1403300 218 294 228 553;554 457 457 235;236 1 EKLQSFDSPER KGRGNDRREKLQSFDS QSFDSPERKRIKYSRE R E K E R K 0 1 0 1 0 1 2 0 0 0 1 1 0 1 1 2 0 0 0 0 0 0 11 1 1334.6466 E9PGM9;P78332 E9PGM9 886 896 RBM6 RNA-binding protein 6 yes no 2 0.0069698 82.645 By matching By MS/MS 1 1 990290 539130 451160 219 254 229 555;556 458 458 193 1 EKTPELPEPSVK PSPAPEKKEKTPELPE ELPEPSVKVKEPSVQE K E K V K V 0 0 0 0 0 0 3 0 0 0 1 2 0 0 3 1 1 0 0 1 0 0 12 1 1352.7187 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 218 229 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 8.8188E-06 105.66 By MS/MS By MS/MS 1 2 4616400 1563300 3053100 220 133 230 557;558;559 459;460;461;462 460 706 4 ELAEDGYSGVEVR ELNEFLTRELAEDGYS GYSGVEVRVTPTRTEI R E L V R V 1 1 0 1 0 0 3 2 0 0 1 0 0 0 0 1 0 0 1 2 0 0 13 0 1422.6627 E9PPU1;H0YEU2;E9PL09;P23396;E9PQ96;E9PJH4;F2Z2S8;H0YF32;E9PK82;H0YCJ7 E9PPU1 28 40 RPS3 40S ribosomal protein S3 yes no 2 0.0049652 72.2 By MS/MS By MS/MS 1 1 800150 364570 435580 221 267 231 560;561 463;464 464 2 ELFDDPSYVNVQNLDK PPPPCPGRELFDDPSY VNVQNLDKARQAVGGA R E L D K A 0 0 2 3 0 1 1 0 0 0 2 1 0 1 1 1 0 0 1 2 0 0 16 0 1894.8949 H0Y539;X6R6D0;P29353;Q5T188 H0Y539 84 99 SHC1 SHC-transforming protein 1 yes no 2 0.0026102 57.164 By matching By MS/MS 1 1 2169100 952110 1217000 222 341 232 562;563 465 465 900 1 ELISNASDALDK SNKEIFLRELISNASD NASDALDKIRYESLTD R E L D K I 2 0 1 2 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1274.6354 P08238;F8W026;P14625;Q96GW1 P08238 42 53 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 2 0.0028627 89.561 By matching By MS/MS 1 1 1595800 467060 1128700 223 504;523 233 564;565 466 466 1 ELLHSVHPESPNLK QTDGILTKELLHSVHP HPESPNLKTSLCFKEQ K E L L K T 0 0 1 0 0 0 2 0 2 0 3 1 0 0 2 2 0 0 0 1 0 0 14 0 1598.8417 Q9Y217 Q9Y217 552 565 MTMR6 Myotubularin-related protein 6 yes yes 3 0.010826 46.378 By MS/MS 1 380320 0 380320 224 788 234 566 467 467 651 1 ELSDQATASPIVAR DSLDSKGKELSDQATA TASPIVARTDLSNIPG K E L A R T 3 1 0 1 0 1 1 0 0 1 1 0 0 0 1 2 1 0 0 1 0 0 14 0 1456.7522 Q5JSH3 Q5JSH3 88 101 WDR44 WD repeat-containing protein 44 yes yes 2 0.0017295 86.944 By MS/MS By MS/MS 1 1 1150900 459750 691140 225 640 235 567;568 468;469 469 495 2 ELSVLHSLLWEVVSQLDK DGYIDLGRELSVLHSL EVVSQLDKGENSFLQA R E L D K G 0 0 0 1 0 1 2 0 1 0 5 1 0 0 0 3 0 1 0 3 0 0 18 0 2094.1361 H0Y638;Q9UJF2 H0Y638 123 140 RASAL2 Ras GTPase-activating protein nGAP yes no 3 0.014584 35.757 By MS/MS 2 0 0 0 226 344 236 569;570 470;471 471 2 EMRVPAQLLGLLLLWLR ________________ GLLLLWLRGARCDIQV M E M L R G 1 2 0 0 0 1 1 1 0 0 7 0 1 0 1 0 0 1 0 1 0 0 17 1 2020.202 A0A075B7D4 A0A075B7D4 2 18 IGKV1OR2-108 yes yes 2 0.014575 33.87 By MS/MS 1 0 0 0 227 7 237 571 472 472 1 EMSNLHLVTQVQAELLRK HAYWELKREMSNLHLV VQAELLRKLKTSTAIK R E M R K L 1 1 1 0 0 2 2 0 1 0 4 1 1 0 0 1 1 0 0 2 0 0 18 1 2108.1412 H7C1Z1;Q9H6S1 H7C1Z1 27 44 AZI2 5-azacytidine-induced protein 2 yes no 2 0.013406 42.843 By MS/MS By matching 1 1 2598500 1769900 828550 228 395 238 572;573 473 473 190;191 1 EMVGALVSDGLDRK PVLVKKEKEMVGALVS VSDGLDRKEPRAGEVI K E M R K E 1 1 0 2 0 0 1 2 0 0 2 1 1 0 0 1 0 0 0 2 0 0 14 1 1488.7606 Q12873 Q12873 1975 1988 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes yes 2 0.012706 50.843 By MS/MS 1 0 0 0 229 605 239 574 474 474 463 1 ENDIKPLTSFRQR DGTELELKENDIKPLT PLTSFRQRKGGSTSSS K E N Q R K 0 2 1 1 0 1 1 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 13 2 1602.8478 C9JXK0;Q14739 C9JXK0 51 63 LBR Lamin-B receptor yes no 2 0.0012929 65.719 By MS/MS 1 480580 480580 0 230 193 240 575 475 475 22;156 144;719 1 ENEVSEHTLESYRSR KAHVIWKKENEVSEHT TLESYRSRSNNEETSS K E N S R S 0 2 1 0 0 0 4 0 1 0 1 0 0 0 0 3 1 0 1 1 0 0 15 1 1834.8446 O95727 O95727 322 336 CRTAM Cytotoxic and regulatory T-cell molecule yes yes 3 0.013386 40.025 By MS/MS 1 0 0 0 231 472 241 576 476 476 66 381 1 ENFLQQLYK IEPFPEERENFLQQLY NFLQQLYKFMEDRGTP R E N Y K F 0 0 1 0 0 2 1 0 0 0 2 1 0 1 0 0 0 0 1 0 0 0 9 0 1181.6081 X6RCR8;Q4LE39 X6RCR8 310 318 ARID4B AT-rich interactive domain-containing protein 4B yes no 2 0.010602 49.813 By MS/MS 1 301020 0 301020 232 636 242 577 477 477 218 938 1 ENQPENSQTPTKK VASFLLSKENQPENSQ NSQTPTKKEHQKAWAL K E N K K E 0 0 2 0 0 2 2 0 0 0 0 2 0 0 2 1 2 0 0 0 0 0 13 1 1499.7216 Q12834 Q12834 98 110 CDC20 Cell division cycle protein 20 homolog yes yes 2 0.01229 53.034 By MS/MS 1 108740 0 108740 233 603 243 578 478 478 815 1 ENYAELLEDAFLK RPGLSLVKENYAELLE LLEDAFLKNVTAQICI K E N L K N 2 0 1 1 0 0 3 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 13 0 1553.7613 A0A087X0S5;P12109 A0A087X0S5 789 801 COL6A1 Collagen alpha-1(VI) chain yes no 2 0.0013591 95.401 By matching By MS/MS 1 1 3445700 1493000 1952700 234 43 244 579;580 479 479 1 EPEELDQLYLDDVNEIIR PIPVTVKREPEELDQL DDVNEIIRNDLSSTST R E P I R N 0 1 1 3 0 1 4 0 0 2 3 0 0 0 1 0 0 0 1 1 0 0 18 0 2202.0692 F5H4S8;O95644 F5H4S8 444 461 NFATC1 Nuclear factor of activated T-cells, cytoplasmic 1 yes no 4 0.014055 23.336 By MS/MS 1 1788000 0 1788000 235 292 245 581 480 480 1 EPLSSETQYSVDTR HNIDHAQREPLSSETQ TQYSVDTRRPAPQKAL R E P T R R 0 1 0 1 0 1 2 0 0 0 1 0 0 0 1 3 2 0 1 1 0 0 14 0 1610.7424 A6PW57;Q99755;A2A3N6 A6PW57 326 339 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 2 0.011109 44.299 By MS/MS By matching 1 1 1212400 504080 708330 236 119 246 582;583 481 481 872 1 EPNVLICFIDK TNSPVELREPNVLICF VLICFIDKFTPPVVNV R E P D K F 0 0 1 1 1 0 1 0 0 2 1 1 0 1 1 0 0 0 0 1 0 0 11 0 1346.6904 A0A0G2JMH6;P01903 A0A0G2JMH6 126 136 HLA-DRA HLA class II histocompatibility antigen, DR alpha chain yes no 2 0.014624 58.63 By matching By MS/MS 1 1 2101200 722840 1378300 237 87 247 584;585 482 482 1 EPQIQMTVTMCKQMLR HQWPIGLKEPQIQMTV TMCKQMLRSILLLYAT K E P L R S 0 1 0 0 1 3 1 0 0 1 1 1 3 0 1 0 2 0 0 1 0 0 16 1 1992.9617 Q96PS1 Q96PS1 142 157 FANCD2OS FANCD2 opposite strand protein yes yes 2 0.013046 40.589 By MS/MS 1 0 0 0 238 726 248 586 483 483 1 EQLGEFYEALDCLR ADKPETTKEQLGEFYE YEALDCLRIPKSDVVY K E Q L R I 1 1 0 1 1 1 3 1 0 0 3 0 0 1 0 0 0 0 1 0 0 0 14 0 1741.7981 P02763 P02763 154 167 ORM1 Alpha-1-acid glycoprotein 1 yes yes 2 0.0041164 71.153 By matching By MS/MS 1 1 2469100 884160 1584900 239 486 249 587;588 484 484 1 EQSEVSVSPR SPDRDKKKEQSEVSVS SEVSVSPRASKHHYSR K E Q P R A 0 1 0 0 0 1 2 0 0 0 0 0 0 0 1 3 0 0 0 2 0 0 10 0 1116.5411 E9PI52;Q7L4I2 E9PI52 25 34 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 2 0.011323 75.088 By MS/MS By matching 1 1 1810300 804650 1005600 240 256 250 589;590 485 485 195 1 EQYVPPRSPK GVTRRNGKEQYVPPRS YVPPRSPK________ K E Q P K - 0 1 0 0 0 1 1 0 0 0 0 1 0 0 3 1 0 0 1 1 0 0 10 1 1199.6299 X6RLN4;Q71RC2 X6RLN4 482 491 LARP4 La-related protein 4 yes no 2 0.0073593 98.105 By MS/MS By MS/MS 1 1 1214800 574380 640450 241 673 251 591;592 486;487 487 520 2 ERDHSPTPSVFNSDEER ERTRERERERDHSPTP VFNSDEERYRYREYAE R E R E R Y 0 2 1 2 0 0 3 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 17 1 2000.8824 Q6UN15 Q6UN15 488 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 3 0.013586 58.159 By matching By MS/MS 1 1 1365100 773270 591810 242 667 252 593;594 488 488 518;828 1 ERDYAEIQDFHR EFRERQARERDYAEIQ AEIQDFHRTFGCDDEL R E R H R T 1 2 0 2 0 1 2 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 12 1 1577.7223 Q5VWV2;Q8TEW0 Q5VWV2 1017 1028 PARD3 Partitioning defective 3 homolog yes no 3 0.005415 52.071 By MS/MS By matching 1 1 671800 359870 311930 243 651 253 595;596 489 489 940 1 ERLDGENIYIR TEAWKKKRERLDGENI DGENIYIRHSNLMLED R E R I R H 0 2 1 1 0 0 2 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 11 1 1376.7048 Q4VB86;P11171 Q4VB86 410 420 EPB41 Protein 4.1 yes no 3 0.00016084 102.05 By MS/MS By MS/MS 1 1 1866700 857500 1009200 244 518 254 597;598 490;491;492;493 491 922 4 ERSPALKSPLQSVVVR AVSELSPRERSPALKS PLQSVVVRRRSPRPSP R E R V R R 1 2 0 0 0 1 1 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 16 2 1765.021 Q9Y2W1 Q9Y2W1 246 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0093028 50.158 By matching By MS/MS 1 1 6257900 2504400 3753500 245 792 255 599;600 494 494 654;655 1 ESATITCLVTGFSPADVFVQWMQR AREQLNLRESATITCL VFVQWMQRGQPLSPEK R E S Q R G 2 1 0 1 1 2 1 1 0 1 1 0 1 2 1 2 3 1 0 3 0 0 24 0 2742.3146 A0A087WYJ9;A0A1B0GUU9;P04220;P01871 A0A087WYJ9 344 367 IGHM Ig mu heavy chain disease protein;Ig mu chain C region yes no 3 0.0035097 44.632 By MS/MS 1 7745200 0 7745200 246 35 256 601 495 495 6 1 ESDDPMAYIHFTAEGEVTFK AFYKSFSKESDDPMAY AEGEVTFKSILFVPTS K E S F K S 2 0 0 2 0 0 3 1 1 1 0 1 1 2 1 1 2 0 1 1 0 0 20 0 2286.0151 P14625 P14625 365 384 HSP90B1 Endoplasmin yes yes 3 0.0057018 44.788 By MS/MS 1 707670 707670 0 247 523 257 602 496 496 66 1 ESFGGSSEIVDQLEVEIR EKLVIQLKESFGGSSE DQLEVEIRNMTLLVEK K E S I R N 0 1 0 1 0 1 4 2 0 2 1 0 0 1 0 3 0 0 0 2 0 0 18 0 1992.964 Q6UX06 Q6UX06 175 192 OLFM4 Olfactomedin-4 yes yes 2;3 4.6394E-254 192.65 By MS/MS By MS/MS 2 2 34352000 13666000 20686000 248 668 258 603;604;605;606 497;498;499;500 499 4 ESHWIGLTDSERENEWK IKKQMVGRESHWIGLT SERENEWKWLDGTSPD R E S W K W 0 1 1 1 0 0 4 1 1 1 1 1 0 0 0 2 1 2 0 0 0 0 17 1 2114.9657 Q5KU26 Q5KU26 662 678 COLEC12 Collectin-12 yes yes 3 0.014865 25.823 By MS/MS By matching 1 1 1201100 662560 538550 249 642 259 607;608 501 501 0 ESLKEEDESDDDNM EEAEKYAKESLKEEDE DESDDDNM________ K E S N M - 0 0 1 4 0 0 4 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 14 1 1654.6152 H0YJ03;G3V4X5;P25788 H0YJ03 70 83 PSMA3 Proteasome subunit alpha type-3 yes no 2 5.2069E-193 185.2 By MS/MS By MS/MS 1 1 23502000 11055000 12447000 250 323 260 609;610 502;503 502 262 2 ESLNGLTSHGKNLK SSGVQTSKESLNGLTS TSHGKNLKIHHSQESK K E S L K I 0 0 2 0 0 0 1 2 1 0 3 2 0 0 0 2 1 0 0 0 0 0 14 1 1496.7947 Q9HCM1 Q9HCM1 1507 1520 KIAA1551 Uncharacterized protein KIAA1551 yes yes 2 0.013631 43.282 By MS/MS 1 0 0 0 251 757 261 611 504 504 614 1 ESQFLMAKKNFNTNLLE AKLKRSHRESQFLMAK NFNTNLLE________ R E S L E - 1 0 3 0 0 1 2 0 0 0 3 2 1 2 0 1 1 0 0 0 0 0 17 2 2026.0194 C9J0A9;Q9UBX0 C9J0A9 135 151 HESX1 Homeobox expressed in ES cells 1 yes no 2 0.010988 43.798 By MS/MS 1 0 0 0 252 172 262 612 505 505 19;152 714 1 ESSANNSVSPSESLR HELDHRERESSANNSV VSPSESLRASEKHRGS R E S L R A 1 1 2 0 0 0 2 0 0 0 1 0 0 0 1 6 0 0 0 1 0 0 15 0 1562.7172 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726 H0YKH0 195 209 TLE3 Transducin-like enhancer protein 3 yes no 2 0.002681 78.69 By MS/MS By MS/MS 1 1 2892000 1327800 1564200 253 297 263 613;614 506;507 506 240;241 2 ESSIIAPAPAEDVDTPPR QVYEFRVKESSIIAPA EDVDTPPRKKKRKHRL K E S P R K 3 1 0 2 0 0 2 0 0 2 0 0 0 0 4 2 1 0 0 1 0 0 18 0 1863.9214 Q15910 Q15910 473 490 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 3 0.00092532 72.916 By matching By MS/MS 1 1 979370 307650 671720 254 629 264 615;616 508 508 819 1 ESVPEFPLSPPK LILSPRSKESVPEFPL EFPLSPPKKKDLSLEE K E S P K K 0 0 0 0 0 0 2 0 0 0 1 1 0 1 4 2 0 0 0 1 0 0 12 0 1325.6867 A2A2D0;P16949 A2A2D0 30 41 STMN1 Stathmin yes no 2 0.0027059 96.734 By MS/MS By MS/MS 1 1 2233600 805700 1427900 255 116 265 617;618 509;510;511;512 511 82 4 ESWTTKVNWMAHTVRK QKFDEALRESWTTKVN WMAHTVRKDYRS____ R E S R K D 1 1 1 0 0 0 1 0 1 0 0 2 1 0 0 1 3 2 0 2 0 0 16 2 1972.9942 Q68DL0;H0Y871;P42338 Q68DL0 502 517 DKFZp779K1237;PIK3CB Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform yes no 3 0.01273 40.983 By MS/MS 1 0 0 0 256 346 266 619 513 513 278;757 1 ETENDDLTNVIQK QALLHIIRETENDDLT DLTNVIQKMICEYSEE R E T Q K M 0 0 2 2 0 1 2 0 0 1 1 1 0 0 0 0 2 0 0 1 0 0 13 0 1517.7209 O95373 O95373 552 564 IPO7 Importin-7 yes yes 2 0.003663 68.626 By matching By MS/MS 1 1 510040 174290 335740 257 468 267 620;621 514 514 1 ETEPTVTTSDAAVDLSSFK NSENLQNKETEPTVTT AVDLSSFKNVQHLELP K E T F K N 2 0 0 2 0 0 2 0 0 0 1 1 0 1 1 3 4 0 0 2 0 0 19 0 1996.9477 A0A075B6R8;B7ZB24;H0YGQ3;F5H1U9;O75970 A0A075B6R8 30 48 MPDZ Multiple PDZ domain protein yes no 2 0.0099546 40.475 By MS/MS By matching 1 1 6076600 4075500 2001100 258 4 268 622;623 515 515 0;1;671 1 ETPHSPGVEDAPIAK PAQLANARETPHSPGV VEDAPIAKVGVLAASM R E T A K V 2 0 0 1 0 0 2 1 1 1 0 1 0 0 3 1 1 0 0 1 0 0 15 0 1546.7627 F8VS07;F8VQE1;Q9UHB6 F8VS07 183 197 LIMA1 LIM domain and actin-binding protein 1 yes no 2;3 0.003106 66.004 By MS/MS By matching 2 1 12333000 8002400 4330700 259 302 269 624;625;626 516;517 516 244 2 ETQSPEQVKSEK SERITVKKETQSPEQV PEQVKSEKLKDLFDYS K E T E K L 0 0 0 0 0 2 3 0 0 0 0 2 0 0 1 2 1 0 0 1 0 0 12 1 1388.6783 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 491 502 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 4.8114E-45 152 By MS/MS By matching 1 1 1504900 903880 601020 260 264 270 627;628 518 518 202 1 ETTVLVAQNGNIK DKNGKDLKETTVLVAQ VAQNGNIKIGQDYKGR K E T I K I 1 0 2 0 0 1 1 1 0 1 1 1 0 0 0 0 2 0 0 2 0 0 13 0 1385.7514 Q86W61;D6RGZ6;E9PF17;P13611 Q86W61 80 92 VCAN Versican core protein yes no 2 0.005783 61.161 By MS/MS 1 176330 0 176330 261 219 271 629 519 519 29 1 EVDEQMLNVQNK FRGRMSMKEVDEQMLN QMLNVQNKNSSYFVEW K E V N K N 0 0 2 1 0 2 2 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 12 0 1445.682 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 Q5JP53 307 318 TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain yes no 2 0.0012137 83.998 By MS/MS By MS/MS 2 2 2355900 920230 1435600 262 499 272;273 630;631;632;633 520;521 520 56 2 EVEDKESEGEEEDEDEDLSK VGPASILKEVEDKESE DEDEDLSKYKLDEDED K E V S K Y 0 0 0 4 0 0 9 1 0 0 1 2 0 0 0 2 0 0 0 1 0 0 20 1 2338.9296 O95218 O95218 147 166 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 0.008596 52.866 By matching By MS/MS 1 1 13330000 5412700 7917400 263 464 274 634;635 522 522 375 1 EVQAEQPSSSSPR KEKEKADREVQAEQPS QPSSSSPRRKTVKEKD R E V P R R 1 1 0 0 0 2 2 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 13 0 1400.6532 Q9Y388 Q9Y388 178 190 RBMX2 RNA-binding motif protein, X-linked 2 yes yes 2 0.010985 61.657 By MS/MS 1 0 0 0 264 796 275 636 523 523 660 1 EVTASCDLSCIVKR FELETNQKEVTASCDL DLSCIVKRTEKRLRKA K E V K R T 1 1 0 1 2 0 1 0 0 1 1 1 0 0 0 2 1 0 0 2 0 0 14 1 1636.7913 A0A0A0MTC8;Q9NQ36 A0A0A0MTC8 596 609 SCUBE2 Signal peptide, CUB and EGF-like domain-containing protein 2 yes no 2 0.012355 42.743 By MS/MS 1 0 0 0 265 67 276 637 524 524 1 EVTSDSGSIVVSGLTPGVEYVYTIQVLR SQGGEAPREVTSDSGS VYTIQVLRDGQERDAP R E V L R D 0 1 0 1 0 1 2 3 0 2 2 0 0 0 1 4 3 0 2 6 0 0 28 0 2967.5441 P02751 P02751 1130 1157 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 3 1.695E-08 69.248 By matching By MS/MS 1 2 38195000 13723000 24472000 266 485 277 638;639;640 525;526;527 525 3 EVVEAVTIVETPPMVVVGIVGYVETPR PGSKVNKKEVVEAVTI VGYVETPRGLRTFKTV K E V P R G 1 1 0 0 0 0 4 2 0 2 0 0 1 0 3 0 3 0 1 9 0 0 27 0 2881.5511 H7C3M2;B5MCW2;H7C422;G5E9G0;P39023;F8WCR1 H7C3M2 103 129 RPL3 60S ribosomal protein L3 yes no 3 1.262E-09 73.781 By MS/MS 1 31975000 0 31975000 267 156 278 641 528 528 25 1 EVVFPLDIGIVGWAAHTKK DNLVGPDKEVVFPLDI GWAAHTKKTHNVPDVK K E V K K T 2 0 0 1 0 0 1 2 1 2 1 2 0 1 1 0 1 1 0 3 0 0 19 1 2079.1517 P51160 P51160 133 151 PDE6C Cone cGMP-specific 3,5-cyclic phosphodiesterase subunit alpha yes yes 3 0.01466 19.819 By MS/MS 1 0 0 0 268 565 279 642 529 529 1 EWFLKEFPQVK QQKDEQFREWFLKEFP LKEFPQVKRKIQESIE R E W V K R 0 0 0 0 0 1 2 0 0 0 1 2 0 2 1 0 0 1 0 1 0 0 11 1 1449.7656 O95236 O95236 150 160 APOL3 Apolipoprotein L3 yes yes 1 0.014641 28.399 By MS/MS 1 864440 864440 0 269 465 280 643 530 530 1 EWFWDLATGTMK VLFFQGDREWFWDLAT DLATGTMKERSWPAVG R E W M K E 1 0 0 1 0 0 1 1 0 0 1 1 1 1 0 0 2 2 0 0 0 0 12 0 1483.6806 P02790;Q9BS19 P02790 167 178 HPX Hemopexin yes no 2 0.0059464 81.865 By MS/MS 1 3503600 0 3503600 270 488 281 644 531 531 53 1 EWNGVVSESDSPVK PPPKAALKEWNGVVSE SESDSPVKRPGRKAAR K E W V K R 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 3 0 1 0 3 0 0 14 0 1531.7155 M0R0Q7;P18858;M0QY71;M0R1G7;B4E135;F5GZ28 M0R0Q7 41 54 LIG1 DNA ligase;DNA ligase 1 yes no 2 0.0043112 64.407 By matching By MS/MS 1 1 924300 362130 562170 271 432 282 645;646 532 532 339 1 EYDQLYEEYTR QQYQDKSREYDQLYEE QLYEEYTRTSQGLLGS R E Y T R T 0 1 0 1 0 1 3 0 0 0 1 0 0 0 0 0 1 0 3 0 0 0 11 0 1507.6467 E9PFP1;O00459 E9PFP1 459 469 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta yes no 2 0.0040444 64.04 By MS/MS By matching 1 1 477500 220160 257340 272 251 283 647;648 533 533 888 1 EYFTFPASK IPTQTYTREYFTFPAS YFTFPASKSQDRMAPP R E Y S K S 1 0 0 0 0 0 1 0 0 0 0 1 0 2 1 1 1 0 1 0 0 0 9 0 1088.5179 Q5TIG5;A8MQ02;J3KN01;P55196 Q5TIG5 1229 1237 MLLT4 Afadin yes no 2 0.0014451 107.69 By matching By MS/MS 1 1 865070 420840 444230 273 128 284 649;650 534 534 873 1 EYIPGQPPLSQSSDSSPTR QYKEKTGKEYIPGQPP SSDSSPTRNSEPAGLE K E Y T R N 0 1 0 1 0 2 1 1 0 1 1 0 0 0 4 5 1 0 1 0 0 0 19 0 2044.9702 V9GYZ6;P07814 V9GYZ6 878 896 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2;3 0.0010134 72.433 By MS/MS By MS/MS 1 2 22656000 10685000 11971000 274 501 285 651;652;653 535;536;537;538 537 391;392;393;394;395 4 EYVQLISVYEK EKELSKVREYVQLISV QLISVYEKKLLNLTVR R E Y E K K 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 1 0 0 2 2 0 0 11 0 1369.7129 Q6UX06 Q6UX06 122 132 OLFM4 Olfactomedin-4 yes yes 2 0.0061331 79.974 By MS/MS By MS/MS 1 2 25431000 10870000 14561000 275 668 286 654;655;656 539;540 540 2 FADLSEAANR AEEWYKSKFADLSEAA DLSEAANRNNDALRQA K F A N R N 3 1 1 1 0 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 10 0 1092.52 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 295 304 VIM Vimentin yes no 2 0.0098102 70.256 By matching By MS/MS 1 1 573330 293220 280110 276 507 287 657;658 541 541 1 FAELVYTGFWHSPECEFVR IKQGLGLKFAELVYTG SPECEFVRHCIAKSQE K F A V R H 1 1 0 0 1 0 3 1 1 0 1 0 0 3 1 1 1 1 1 2 0 0 19 0 2373.0888 P00966 P00966 317 335 ASS1 Argininosuccinate synthase yes yes 3 0.0078094 42.095 By MS/MS By matching 1 1 2554900 1450300 1104600 277 477 288 659;660 542 542 1 FAHTNVESLVNEYDDNGEGIILFR SNLRDNYRFAHTNVES GEGIILFRPSHLTNKF R F A F R P 1 1 3 2 0 0 3 2 1 2 2 0 0 2 0 1 1 0 1 2 0 0 24 0 2751.314 P30101 P30101 184 207 PDIA3 Protein disulfide-isomerase A3 yes yes 3 8.2185E-23 100.85 By matching By MS/MS 1 1 9505900 5362400 4143600 278 547 289 661;662 543 543 1 FASDDEHDEHDENGATGPVK QFQGKKTKFASDDEHD NGATGPVKRAREETDK K F A V K R 2 0 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 20 0 2168.8883 P05455 P05455 364 383 SSB Lupus La protein yes yes 3 0.00057679 64.705 By MS/MS By MS/MS 2 2 11029000 5154600 5874500 279 494 290 663;664;665;666 544;545 544 73 387 2 FASDDEHDEHDENGATGPVKR QFQGKKTKFASDDEHD GATGPVKRAREETDKE K F A K R A 2 1 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 21 1 2324.9894 P05455 P05455 364 384 SSB Lupus La protein yes yes 3 2.2035E-05 78.513 By matching By MS/MS 1 1 3147800 2139600 1008200 280 494 291 667;668 546 546 73 387 1 FASENDLPEWK ________________ ENDLPEWKERGTGDVK R F A W K E 1 0 1 1 0 0 2 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 11 0 1334.6143 C9JIC6;C9JXG8;C9JJ34;C9JDM3;C9JGV6;F6WQW2;P43487 C9JIC6 8 18 RANBP1 Ran-specific GTPase-activating protein yes no 2 0.0084172 73.36 By matching By MS/MS 1 1 1755300 788000 967290 281 183 292 669;670 547 547 139 1 FDEFFSEGCAPGSK YNKINHCRFDEFFSEG EGCAPGSKKDSSLCKL R F D S K K 1 0 0 1 1 0 2 2 0 0 0 1 0 3 1 2 0 0 0 0 0 0 14 0 1576.6504 P02787;H7C5E8 P02787 495 508 TF Serotransferrin yes no 2 0.0049418 74.962 By matching By MS/MS 1 1 781640 386900 394740 282 487 293 671;672 548 548 1 FDVGDWLESIHLGEHR KPLQLWSKFDVGDWLE SIHLGEHRDRFEDHEI K F D H R D 0 1 0 2 0 0 2 2 2 1 2 0 0 1 0 1 0 1 0 1 0 0 16 0 1908.9119 A0A0U1RR93;A0A0U1RQS4;Q9BYB0 A0A0U1RR93 1664 1679 SHANK3 SH3 and multiple ankyrin repeat domains protein 3 yes no 2 0.0092141 54.143 By MS/MS 1 0 0 0 283 94 294 673 549 549 1 FEPESPGFESR EFEPQSPRFEPESPGF ESPGFESRSPGLVPPS R F E S R S 0 1 0 0 0 0 3 1 0 0 0 0 0 2 2 2 0 0 0 0 0 0 11 0 1280.5673 H3BS42;Q9H5H4 H3BS42 48 58 ZNF768 Zinc finger protein 768 yes no 2 0.0096693 71.558 By MS/MS By matching 1 1 1698700 662220 1036500 284 381 295 674;675 550 550 296 1 FGEYNSNMSPEEK SNVFRDKRFGEYNSNM SNMSPEEKMMKRFALE R F G E K M 0 0 2 0 0 0 3 1 0 0 0 1 1 1 1 2 0 0 1 0 0 0 13 0 1530.6297 E9PFK5;P78316 E9PFK5 88 100 NOP14 Nucleolar protein 14 yes no 2 0.012817 61.423 By MS/MS By matching 1 1 1348200 748760 599440 285 250 296 676;677 551 551 192 1 FGNDVQHFK GDFSLSVKFGNDVQHF GNDVQHFKVLRDGAGK K F G F K V 0 0 1 1 0 1 0 1 1 0 0 1 0 2 0 0 0 0 0 1 0 0 9 0 1090.5196 P62993;J3KT38 P62993 101 109 GRB2 Growth factor receptor-bound protein 2 yes no 3 0.011402 47.96 By MS/MS By MS/MS 1 1 1540400 717550 822860 286 582 297 678;679 552;553 552 2 FHPEPYGLEDDQR GSSVDLHRFHPEPYGL YGLEDDQRSMGYDDLD R F H Q R S 0 1 0 2 0 1 2 1 1 0 1 0 0 1 2 0 0 0 1 0 0 0 13 0 1601.711 C9JZR2;O60716;E9PRE2 C9JZR2 275 287 CTNND1 Catenin delta-1 yes no 2 0.0023537 63.694 By MS/MS 1 445670 0 445670 287 195 298 680 554 554 881 1 FIAVGYVDDTQFVR RPGRGEPRFIAVGYVD VDDTQFVRFDSDAASP R F I V R F 1 1 0 2 0 1 0 1 0 1 0 0 0 2 0 0 1 0 1 3 0 0 14 0 1628.8199 A0A140TA13;A0A140T953;P30685;P30498;P30495;P30491;P30490;P30484;P30464;P18465;P18464;P10319;A0A140T9Z4;A0A140T9M5;Q5SRN7;A0A140T975;A0A140T955;A0A140T941;A0A140T933;A0A140T8W8;A0A0G2JI36;Q9GJ45;A0A140T937;A0A140T9Z6;B0UXQ0;A0A140T9I0;Q5SRN5;A0A140T9X5;A0A140T913;A0A140T8Y4;A0A0G2JIF2;A0A140T912;A0A0G2JPD3;A0A0G2JL56;A0A140T930;Q29940;P30493;P30492;P30512;P30459;P30457;P30456;P30455;P30453;P30450;P30447;P30443;P18462;P16190;P16189;P16188;P13746;P10316;P10314;P05534;P04439;P01892;P01891;Q29960;P30510;P30508;P30504;Q95604 A0A140TA13 46 59 HLA-B;HLA-A;HLA-C HLA class I histocompatibility antigen, B-35 alpha chain;HLA class I histocompatibility antigen, B-78 alpha chain;HLA class I histocompatibility antigen, B-56 alpha chain;HLA class I histocompatibility antigen, B-53 alpha chain;HLA class I histocompatibility antigen, B-52 alpha chain;HLA class I histocompatibility antigen, B-46 alpha chain;HLA class I histocompatibility antigen, B-15 alpha chain;HLA class I histocompatibility antigen, B-57 alpha chain;HLA class I histocompatibility antigen, B-51 alpha chain;HLA class I histocompatibility antigen, B-58 alpha chain;HLA class I histocompatibility antigen, B-59 alpha chain;HLA class I histocompatibility antigen, B-55 alpha chain;HLA class I histocompatibility antigen, B-54 alpha chain;HLA class I histocompatibility antigen, A-29 alpha chain;HLA class I histocompatibility antigen, A-74 alpha chain;HLA class I histocompatibility antigen, A-66 alpha chain;HLA class I histocompatibility antigen, A-43 alpha chain;HLA class I histocompatibility antigen, A-36 alpha chain;HLA class I histocompatibility antigen, A-34 alpha chain;HLA class I histocompatibility antigen, A-26 alpha chain;HLA class I histocompatibility antigen, A-23 alpha chain;HLA class I histocompatibility antigen, A-1 alpha chain;HLA class I histocompatibility antigen, A-25 alpha chain;HLA class I histocompatibility antigen, A-33 alpha chain;HLA class I histocompatibility antigen, A-31 alpha chain;HLA class I histocompatibility antigen, A-30 alpha chain;HLA class I histocompatibility antigen, A-11 alpha chain;HLA class I histocompatibility antigen, A-69 alpha chain;HLA class I histocompatibility antigen, A-32 alpha chain;HLA class I histocompatibility antigen, A-24 alpha chain;HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, A-2 alpha chain;HLA class I histocompatibility antigen, A-68 alpha chain;HLA class I histocompatibility antigen, Cw-16 alpha chain;HLA class I histocompatibility antigen, Cw-14 alpha chain;HLA class I histocompatibility antigen, Cw-12 alpha chain;HLA class I histocompatibility antigen, Cw-4 alpha chain;HLA class I histocompatibility antigen, Cw-17 alpha chain yes no 2 0.00073722 93.058 By MS/MS By matching 1 1 793130 358920 434200 288 104 299 681;682 555 555 1 FIEGISEKTLR DQAKAVLKFIEGISEK GISEKTLRSTVALTAA K F I L R S 0 1 0 0 0 0 2 1 0 2 1 1 0 1 0 1 1 0 0 0 0 0 11 1 1291.7136 A0A087WV29;Q9H0A0 A0A087WV29 114 124 NAT10 N-acetyltransferase 10 yes no 2 0.0084351 58.676 By matching By MS/MS 1 1 750990 357280 393710 289 23 300 683;684 556 556 11;675 1 FIHQQPQSSSPVYGSSAK QWQPSSSRFIHQQPQS PVYGSSAKTSSVSNPQ R F I A K T 1 0 0 0 0 3 0 1 1 1 0 1 0 1 2 5 0 0 1 1 0 0 18 0 1946.9486 F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023 F5H836 77 94 PXN Paxillin yes no 3 1.0343E-05 85.362 By MS/MS By MS/MS 1 1 1384800 587030 797770 290 106 301 685;686 557;558 557 71;72 2 FINDYGTHYITSGSMGGIYEYILVIDK YNYGMYAKFINDYGTH EYILVIDKAKMESLGI K F I D K A 0 0 1 2 0 0 1 4 1 5 1 1 1 1 0 2 2 0 4 1 0 0 27 0 3068.4841 P07357 P07357 333 359 C8A Complement component C8 alpha chain yes yes 3 2.6792E-06 58.477 By MS/MS By MS/MS 1 1 18377000 8132700 10244000 291 498 302 687;688 559;560 560 55 2 FITVGYVDDTLFVR RPGRGEPRFITVGYVD VDDTLFVRFDSDATSP R F I V R F 0 1 0 2 0 0 0 1 0 1 1 0 0 2 0 0 2 0 1 3 0 0 14 0 1643.8559 P30488;P30487;A0A140TA14;A0A140TA11;A0A140T9Y5;A0A140T997;Q04826;P30485;P30483;P30481;P30479;P03989 P30488 46 59 HLA-B HLA class I histocompatibility antigen, B-50 alpha chain;HLA class I histocompatibility antigen, B-49 alpha chain;HLA class I histocompatibility antigen, B-40 alpha chain;HLA class I histocompatibility antigen, B-47 alpha chain;HLA class I histocompatibility antigen, B-45 alpha chain;HLA class I histocompatibility antigen, B-44 alpha chain;HLA class I histocompatibility antigen, B-41 alpha chain;HLA class I histocompatibility antigen, B-27 alpha chain yes no 2 0.0089162 57.836 By MS/MS 1 1005600 0 1005600 292 548 303 689 561 561 1 FLESAAADFSDEDEDDDVDGREK ASVLDNFKFLESAAAD DDVDGREKSVIDTSTI K F L E K S 3 1 0 7 0 0 4 1 0 0 1 1 0 2 0 2 0 0 0 1 0 0 23 1 2574.0518 O43815 O43815 236 258 STRN Striatin yes yes 3 0.0112 43.164 By MS/MS By matching 1 1 3920700 1995100 1925500 293 450 304 690;691 562 562 363 1 FLLSVVQSYFVYWAR AQPVGDIKFLLSVVQS SYFVYWARIESSVVSQ K F L A R I 1 1 0 0 0 1 0 0 0 0 2 0 0 2 0 2 0 1 2 3 0 0 15 0 1876.9876 A0A1B0GV85 A0A1B0GV85 108 122 yes yes 2 0.0064262 45.014 By MS/MS By matching 1 1 2497400 1348500 1148900 294 109 305 692;693 563 563 138 76;871 1 FLLYTNENPNNFQEVAADSSSISGSNFK SPKDVNTRFLLYTNEN SISGSNFKTNRKTRFI R F L F K T 2 0 5 1 0 1 2 1 0 1 2 1 0 3 1 5 1 0 1 1 0 0 28 0 3092.4363 P16233 P16233 55 82 PNLIP Pancreatic triacylglycerol lipase yes yes 3 0.011351 35.158 By MS/MS By matching 1 1 4123600 2181800 1941800 295 525 306 694;695 564 564 1 FLSIISPSSWIGVFR IDNEEEMKFLSIISPS SSWIGVFRNSSHHPWV K F L F R N 0 1 0 0 0 0 0 1 0 3 1 0 0 2 1 4 0 1 0 1 0 0 15 0 1707.9348 H0YGB7;F5GYZ0;P26715 H0YGB7 45 59 KLRC1 NKG2-A/NKG2-B type II integral membrane protein yes no 3 0.011652 42.068 By matching By MS/MS 1 1 998680 488300 510390 296 286 307 696;697 565 565 229;230 1 FMVDIALGMEYLSNR IPLQTLLKFMVDIALG GMEYLSNRNFLHRDLA K F M N R N 1 1 1 1 0 0 1 1 0 1 2 0 2 1 0 1 0 0 1 1 0 0 15 0 1757.8481 H7C3L9;A0A087WZQ5;E9PHX8;Q12866 H7C3L9 10 24 MERTK Receptor protein-tyrosine kinase;Tyrosine-protein kinase Mer yes no 2 0.012165 42.001 By MS/MS 1 0 0 0 297 36 308 698 566 566 8 7 1 FNALQYLR IPDEYFKRFNALQYLR FNALQYLRLSHNELAD R F N L R L 1 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 8 0 1023.5502 P51884 P51884 228 235 LUM Lumican yes yes 2 5.0249E-05 128.86 By MS/MS 1 962530 962530 0 298 567 309 699 567 567 1 FPGLCNYVFSEHCGAAYEDFNIQLR TFDGDVFRFPGLCNYV EDFNIQLRRSQESAAP R F P L R R 2 1 2 1 2 1 2 2 1 1 2 0 0 3 1 1 0 0 2 1 0 0 25 0 3006.3429 P98088 P98088 99 123 MUC5AC Mucin-5AC yes yes 3 0.014896 30.813 By matching By MS/MS 1 1 3514200 728630 2785600 299 586 310 700;701 568 568 1 FQEAKGDSPQEK YNVYVAERFQEAKGDS KGDSPQEKLKTVKENW R F Q E K L 1 0 0 1 0 2 2 1 0 0 0 2 0 1 1 1 0 0 0 0 0 0 12 1 1362.6416 H7BYN3;Q00059 H7BYN3 152 163 TFAM Transcription factor A, mitochondrial yes no 2 0.0040472 63.091 By MS/MS 1 357510 0 357510 300 389 311 702 569 569 186;187 304 1 FQELIFEDFAR TCKSELPRFQELIFED LIFEDFARFILVENTY R F Q A R F 1 1 0 1 0 1 2 0 0 1 1 0 0 3 0 0 0 0 0 0 0 0 11 0 1413.6929 Q96TA1 Q96TA1 519 529 FAM129B Niban-like protein 1 yes yes 2 0.012171 61.593 By MS/MS 1 526170 0 526170 301 729 312 703 570 570 1 FQSEEQQQTEDELQDK RINKKIEKFQSEEQQQ TEDELQDKIHPFAQTQ K F Q D K I 0 0 0 2 0 5 4 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 16 0 1980.8549 CON__P02666 CON__P02666 33 48 yes yes 2 5.4333E-23 130.21 By MS/MS By MS/MS 4 4 22766000 10057000 12709000 + 302 200 313;314;315 704;705;706;707;708;709;710;711 571;572;573;574;575 571 158;159;160 150 5 FRAFHFLNRFPSVYLR SLRIARFRFRAFHFLN RFPSVYLRCKMVVCRA R F R L R C 1 3 1 0 0 0 0 0 1 0 2 0 0 4 1 1 0 0 1 1 0 0 16 2 2069.1112 Q9UGM3 Q9UGM3 2344 2359 DMBT1 Deleted in malignant brain tumors 1 protein yes yes 2 0.010796 44.188 By MS/MS 1 0 0 0 303 773 316 712 576 576 631;953 1 FSGSGSGTDFTLK RASGVPDRFSGSGSGT SGTDFTLKISRVEAED R F S L K I 0 0 0 1 0 0 0 3 0 0 1 1 0 2 0 3 2 0 0 0 0 0 13 0 1302.6092 A0A087X0Q4;A2NJV5;A0A0A0MRZ7;A0A075B6S6;A0A075B6S2;A0A075B6P5;A0A087WW87;P06310;P01615;P01614 A0A087X0Q4 69 81 IGKV2-40;IGKV A18;IGKV2D-26;IGKV2D-30;IGKV2D-29;IGKV2D-28 Ig kappa chain V-II region RPMI 6410;Ig kappa chain V-II region FR;Ig kappa chain V-II region Cum yes no 2 1.1341E-09 121.36 By MS/MS By MS/MS 1 1 19552000 10671000 8880500 304 2 317 713;714 577;578;579;580;581 578 5 FSILTVNNDITLLK AKVFKNPKFSILTVNN NNDITLLKLATPARFS K F S L K L 0 0 2 1 0 0 0 0 0 2 3 1 0 1 0 1 2 0 0 1 0 0 14 0 1589.9029 H3BTQ4;H3BP92;H3BMY1;J3QKZ2;Q6GPI1;P17538 H3BTQ4 60 73 CTRB2;CTRB1 Chymotrypsinogen B2;Chymotrypsin B2 chain A;Chymotrypsin B2 chain B;Chymotrypsin B2 chain C;Chymotrypsinogen B;Chymotrypsin B chain A;Chymotrypsin B chain B;Chymotrypsin B chain C yes no 2 0.0020818 79.659 By MS/MS By MS/MS 1 1 3097800 1415100 1682600 305 374 318 715;716 582;583 582 2 FSPDSQYIDNR KNNYYSSRFSPDSQYI DSQYIDNRSVNSAGLH R F S N R S 0 1 1 2 0 1 0 0 0 1 0 0 0 1 1 2 0 0 1 0 0 0 11 0 1340.5997 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8 Q5VWV2 338 348 PARD3 Partitioning defective 3 homolog yes no 2 0.010424 51.276 By matching By MS/MS 1 1 1158900 538850 620040 306 651 319 717;718 584 584 941 1 FSTFLSLLEAADLK EKLKQDKRFSTFLSLL LLEAADLKELLTQPGD R F S L K E 2 0 0 1 0 0 1 0 0 0 4 1 0 2 0 2 1 0 0 0 0 0 14 0 1553.8341 B1ALD9;Q15063 B1ALD9 509 522 POSTN Periostin yes no 2 0.00011279 98.156 By MS/MS By MS/MS 1 1 3237300 1791900 1445400 307 140 320 719;720 585;586 586 2 FTSSSDIPVEFIRR RSIRLTSKFTSSSDIP IPVEFIRRNVKLRGRL K F T R R N 0 2 0 1 0 0 1 0 0 2 0 0 0 2 1 3 1 0 0 1 0 0 14 1 1652.8522 Q6P1S2 Q6P1S2 62 75 C3orf33 Protein C3orf33 yes yes 3 0.014784 30.483 By MS/MS 1 0 0 0 308 661 321 721 587 587 1 FVAFSGEGQSLR EEDEAGGRFVAFSGEG SGEGQSLRKKGRKP__ R F V L R K 1 1 0 0 0 1 1 2 0 0 1 0 0 2 0 2 0 0 0 1 0 0 12 0 1296.6463 Q92890 Q92890 290 301 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 0.0086031 74.987 By MS/MS 1 322940 0 322940 309 712 322 722 588 588 566 1 FVSEIVDTVYEDGDSIQVGLVQYNSDPTDEFFLK DSFQEVLRFVSEIVDT PTDEFFLKDFSTKRQI R F V L K D 0 0 1 5 0 2 3 2 0 2 2 1 0 3 1 3 2 0 2 5 0 0 34 0 3867.8255 E7ENL6;P12111 E7ENL6 1054 1087 COL6A3 Collagen alpha-3(VI) chain yes no 3;4 9.8609E-12 65.587 By MS/MS By MS/MS 2 5 68897000 10209000 58688000 310 227 323 723;724;725;726;727;728;729 589;590;591;592;593 590 5 FWQQAGGGFTSKR TVGIKHIKFWQQAGGG GGGFTSKRGTFGSVGK K F W K R G 1 1 0 0 0 2 0 3 0 0 0 1 0 2 0 1 1 1 0 0 0 0 13 1 1468.7211 Q6ZMW3 Q6ZMW3 842 854 EML6 Echinoderm microtubule-associated protein-like 6 yes yes 2 0.0091758 47.603 By MS/MS 1 0 0 0 311 669 324 730 594 594 222 519;829 1 FYLDTGDASNFAR KTNDVGQKFYLDTGDA GDASNFARWRYKVSVT K F Y A R W 2 1 1 2 0 0 0 1 0 0 1 0 0 2 0 1 1 0 1 0 0 0 13 0 1475.6681 P16233 P16233 342 354 PNLIP Pancreatic triacylglycerol lipase yes yes 2 0.00089031 83.883 By matching By MS/MS 1 1 451400 199980 251410 312 525 325 731;732 595 595 1 FYQLELVNR KKLIEDNKFYQLELVN YQLELVNRETNFNKVF K F Y N R E 0 1 1 0 0 1 1 0 0 0 2 0 0 1 0 0 0 0 1 1 0 0 9 0 1180.6241 B9DI78;A0A0C4DGZ2;H0YBA5;A0A087X2A7;Q8NB25 B9DI78 77 85 FAM184A Protein FAM184A yes no 2 0.010796 48.561 By matching By MS/MS 1 1 431640 214810 216830 313 50 326 733;734 596 596 9 863 1 GAQASSGSPALPR SLAPGFIRGAQASSGS SGSPALPRKQRDKSPS R G A P R K 3 1 0 0 0 1 0 2 0 0 1 0 0 0 2 3 0 0 0 0 0 0 13 0 1197.6102 P42684 P42684 613 625 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0066874 72.434 By MS/MS 1 0 0 0 314 556 327 735 597 597 426 1 GAQMIVAMKAVSLGFDLDR TVTWHKMRGAQMIVAM SLGFDLDRGEVGTVPS R G A D R G 3 1 0 2 0 1 0 2 0 1 2 1 2 1 0 1 0 0 0 2 0 0 19 1 2021.0438 A0A0A0MRC5;Q9H237 A0A0A0MRC5 80 98 PORCN Protein-serine O-palmitoleoyltransferase porcupine yes no 2 0.0055303 55.314 By matching By MS/MS 1 1 3828500 1311800 2516700 315 54 328 736;737 598 598 129 10 1 GASTVSSSSSTK TQQAPRQRGASTVSSS VSSSSSTKVDLKSGLE R G A T K V 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 6 2 0 0 1 0 0 12 0 1097.52 Q5VTQ0 Q5VTQ0 118 129 TTC39B Tetratricopeptide repeat protein 39B yes yes 2 0.011721 65.232 By matching By MS/MS 1 1 492530 256350 236180 316 650 329 738;739 599 599 506;507;824 1 GAVGLNLQSK DITFLWYKGAVGLNLQ VGLNLQSKTQRSLTAE K G A S K T 1 0 1 0 0 1 0 2 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 985.55564 Q96LA6 Q96LA6 150 159 FCRL1 Fc receptor-like protein 1 yes yes 2 0.0077759 79.201 By MS/MS 1 7903400 7903400 0 317 723 330 740 600 600 234 579 1 GDVTAEEAAGASPAK SQSSKAPRGDVTAEEA AAGASPAKANGQENGH R G D A K A 5 0 0 1 0 0 2 2 0 0 0 1 0 0 1 1 1 0 0 1 0 0 15 0 1372.647 P49006 P49006 11 25 MARCKSL1 MARCKS-related protein yes yes 2 4.0004E-38 140.46 By MS/MS By MS/MS 1 1 8405200 3045600 5359600 318 561 331 741;742 601;602;603 603 431 3 GDVTAEEAAGASPAKANGQENGHVK SQSSKAPRGDVTAEEA GQENGHVKSNGDLSPK R G D V K S 6 0 2 1 0 1 3 4 1 0 0 2 0 0 1 1 1 0 0 2 0 0 25 1 2407.1364 P49006 P49006 11 35 MARCKSL1 MARCKS-related protein yes yes 3 5.5608E-05 62.064 By MS/MS By MS/MS 3 3 7496800 4092200 3404700 319 561 332;333 743;744;745;746;747;748 604;605;606;607 605 81;82 431 4 GEAAAERPGEAAVASSPSK QFSKTAAKGEAAAERP AVASSPSKANGQENGH K G E S K A 6 1 0 0 0 0 3 2 0 0 0 1 0 0 2 3 0 0 0 1 0 0 19 1 1783.8701 P29966 P29966 12 30 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.0083421 55.322 By matching By MS/MS 1 1 1541100 550600 990470 320 546 334 749;750 608 608 420 1 GECQAEGVLFFQGDREWFWDLATGTMK DAAVECHRGECQAEGV DLATGTMKERSWPAVG R G E M K E 2 1 0 2 1 2 3 4 0 0 2 1 1 3 0 0 2 2 0 1 0 0 27 1 3177.4324 P02790;Q9BS19 P02790 152 178 HPX Hemopexin yes no 3 1.8107E-05 56.131 By MS/MS By matching 1 1 31305000 11610000 19695000 321 488 335 751;752 609 609 53 1 GEGNETTNMVITWKPLR EKNPVDVKGEGNETTN VITWKPLRWMDWNAPQ K G E L R W 0 1 2 0 0 0 2 2 0 1 1 1 1 0 1 0 3 1 0 1 0 0 17 1 1944.9727 H0Y5C3;P32004 H0Y5C3 144 160 L1CAM Neural cell adhesion molecule L1 yes no 2 0.010539 44.188 By MS/MS 1 0 0 0 322 343 336 753 610 610 44 755;756 1 GEPAAAAAPEAGASPVEK ASPSAAEKGEPAAAAA AGASPVEKEAPAEGEA K G E E K E 7 0 0 0 0 0 3 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 18 0 1621.7948 P29966 P29966 88 105 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.00034727 78.814 By matching By MS/MS 1 1 3449200 1532600 1916600 323 546 337 754;755 611 611 421 1 GEPNVSYICSR GSAKQLVRGEPNVSYI NVSYICSRYYRAPELI R G E S R Y 0 1 1 0 1 0 1 1 0 1 0 0 0 0 1 2 0 0 1 1 0 0 11 0 1280.5819 A8MT37;P49841;P49840 A8MT37 191 201 GSK3A;GSK3B Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha yes no 2 0.00089395 89.171 By MS/MS By MS/MS 1 1 3872900 1720400 2152400 324 129 338 756;757 612;613;614 613 99;874 3 GEVPPKETPK PSQGAEAKGEVPPKET VPPKETPKKKKKFSFK K G E P K K 0 0 0 0 0 0 2 1 0 0 0 2 0 0 3 0 1 0 0 1 0 0 10 1 1080.5815 P49006 P49006 78 87 MARCKSL1 MARCKS-related protein yes yes 2 0.0086518 81.92 By MS/MS By MS/MS 3 3 5012400 2363100 2649400 325 561 339 758;759;760;761;762;763 615;616;617;618 615 802 4 GEVSFVVEHRLVYHGDR YVPILGNKGEVSFVVE RLVYHGDRGGVV____ K G E D R G 0 2 0 1 0 0 2 2 2 0 1 0 0 1 0 1 0 0 1 4 0 0 17 1 1998.0072 F6SGE3 F6SGE3 66 82 ST6GALNAC6 yes yes 2 0.0080972 56.205 By MS/MS 1 2270000 2270000 0 326 299 340 764 619 619 894 1 GEWTCIAYSQLR CTCVGNGRGEWTCIAY CIAYSQLRDQCIVDDI R G E L R D 1 1 0 0 1 1 1 1 0 1 1 0 0 0 0 1 1 1 1 0 0 0 12 0 1482.6925 P02751 P02751 504 515 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 0.010594 61.353 By matching By MS/MS 1 1 1156800 398880 757940 327 485 341 765;766 620 620 1 GFAFVTFDDHDSVDK DRGSGKKRGFAFVTFD DDHDSVDKIVIQKYHT R G F D K I 1 0 0 4 0 0 0 1 1 0 0 1 0 3 0 1 1 0 0 2 0 0 15 0 1698.7526 F8VTQ5;F8W6I7;P09651;F8VZ49;Q32P51;H0YH80 F8VTQ5 98 112 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 3 0.00057869 66.215 By MS/MS By MS/MS 1 1 498730 258270 240460 328 305 342 767;768 621;622 622 2 GFLLLASLR VDAVRAEKGFLLLASL FLLLASLRQMKKTRGT K G F L R Q 1 1 0 0 0 0 0 1 0 0 4 0 0 1 0 1 0 0 0 0 0 0 9 0 988.60695 CON__Q28194;P07996 CON__Q28194 87 95 THBS1 Thrombospondin-1 yes no 2 0.0030344 108.09 By MS/MS By matching 1 1 2656400 1105800 1550700 + 329 205 343 769;770 623 623 1 GFLLPDSDVEIDLELFVNK WLNANPSRGFLLPDSD DLELFVNKMTATKLNS R G F N K M 0 0 1 3 0 0 2 1 0 1 4 1 0 2 1 1 0 0 0 2 0 0 19 0 2162.1147 E7ESY0;P32019 E7ESY0 646 664 INPP5B Type II inositol 1,4,5-trisphosphate 5-phosphatase yes no 3 0.011818 44.005 By MS/MS 1 0 0 0 330 236 344 771 624 624 174 1 GFSYLYGAWGR SVVQLNWRGFSYLYGA YLYGAWGRDYSPQHPN R G F G R D 1 1 0 0 0 0 0 3 0 0 1 0 0 1 0 1 0 1 2 0 0 0 11 0 1275.6037 Q6UX06 Q6UX06 266 276 OLFM4 Olfactomedin-4 yes yes 2 0.0046966 81.594 By matching By MS/MS 1 1 2638900 1306400 1332500 331 668 345 772;773 625 625 1 GGAPDPSPGATATPGAPAQPSSPDAR RGRKPRVRGGAPDPSP QPSSPDARRNGQEKHF R G G A R R 6 1 0 2 0 1 0 4 0 0 0 0 0 0 7 3 2 0 0 0 0 0 26 0 2329.0935 O95365 O95365 505 530 ZBTB7A Zinc finger and BTB domain-containing protein 7A yes yes 3 0.0069045 42.106 By MS/MS By matching 1 1 839840 402870 436970 332 467 346 774;775 626 626 379 1 GGGTPDANSLAPPGK FPPNSSGRGGGTPDAN NSLAPPGKAGGGSGPQ R G G G K A 2 0 1 1 0 0 0 4 0 0 1 1 0 0 3 1 1 0 0 0 0 0 15 0 1337.6575 Q5T171;Q9BRQ0 Q5T171 262 276 PYGO2 Pygopus homolog 2 yes no 2 0.014939 50.108 By MS/MS By matching 1 1 1264500 635710 628800 333 645 347 776;777 627 627 822 0 GGLSPANDTGAK EEDNSYNRGGLSPAND PANDTGAKKKKKKQKK R G G A K K 2 0 1 1 0 0 0 3 0 0 1 1 0 0 1 1 1 0 0 0 0 0 12 0 1086.5306 K7EN42;B7Z8J4;P30419 K7EN42 43 54 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes no 2 0.0093092 67.234 By matching By MS/MS 1 1 1978500 757670 1220900 334 163 348 778;779 628 628 123 1 GGSISVQVNSIKFDSE KKKRGSYRGGSISVQV NSIKFDSE________ R G G S E - 0 0 1 1 0 1 1 2 0 2 0 1 0 1 0 4 0 0 0 2 0 0 16 1 1665.821 A0A0A0MRM9;Q14978 A0A0A0MRM9 693 708 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 1.525E-14 117.18 By MS/MS 1 3512300 3512300 0 335 57 349 780 629 629 41 1 GHPHSASSPSER NNSSSETRGHPHSASS SASSPSERVFPMPLPR R G H E R V 1 1 0 0 0 0 1 1 2 0 0 0 0 0 2 4 0 0 0 0 0 0 12 0 1247.5643 C9JZP1;C9J470;E9PHA2;Q15003 C9JZP1 21 32 NCAPH Condensin complex subunit 2 yes no 2 0.013256 63.966 By matching By MS/MS 1 1 236590 127570 109020 336 178 350 781;782 630 630 134 1 GILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVK QASEGPLKGILGYTEH ALNDHFVKLISWYDNE K G I V K L 3 0 2 4 0 1 1 4 3 2 2 1 0 3 0 5 3 0 1 3 0 0 38 0 4035.8875 E7EUT5;P04406 E7EUT5 197 234 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 4 0.013043 24.11 By matching By MS/MS 1 1 966960 396960 570010 337 240 351 783;784 631 631 1 GILVASDSGAVELWELDENETLIVSK DLTWVGERGILVASDS NETLIVSKFCKYEHDD R G I S K F 2 0 1 2 0 0 4 2 0 2 4 1 0 0 0 3 1 1 0 3 0 0 26 0 2786.4226 Q9BQA1;H0Y711 Q9BQA1 93 118 WDR77 Methylosome protein 50 yes no 3 0.0081065 37.642 By MS/MS 1 2618100 0 2618100 338 732 352 785 632 632 1 GKDSLSDDGVDLK ________________ SDDGVDLKTQPVRNTE K G K L K T 0 0 0 4 0 0 0 2 0 0 2 2 0 0 0 2 0 0 0 1 0 0 13 1 1347.6518 E5RJ37;P07948 E5RJ37 8 20 LYN Tyrosine-protein kinase Lyn yes no 2 0.010266 64.244 By matching By MS/MS 1 1 1431400 737840 693520 339 224 353 786;787 633 633 161 1 GKGSPRPQAPK EEEEEKLKGKGSPRPQ SPRPQAPKANGTSALT K G K P K A 1 1 0 0 0 1 0 2 0 0 0 2 0 0 3 1 0 0 0 0 0 0 11 2 1121.6305 A0A0A0MRM9;Q14978 A0A0A0MRM9 544 554 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 0.0096452 69.314 By MS/MS By matching 1 1 2739900 1307000 1432900 340 57 354 788;789 634 634 42 1 GLAAGSAETLPANFR KFRPKDIRGLAAGSAE ETLPANFRVTSSMSSP R G L F R V 4 1 1 0 0 0 1 2 0 0 2 0 0 1 1 1 1 0 0 0 0 0 15 0 1473.7576 Q13136 Q13136 1151 1165 PPFIA1 Liprin-alpha-1 yes yes 2 0.0011015 90.476 By MS/MS By MS/MS 1 1 2167900 1012100 1155900 341 609 355 790;791 635;636 635 816 2 GLAFIQDPDGYWIEILNPNK KPDDGKMKGLAFIQDP IEILNPNKMATLM___ K G L N K M 1 0 2 2 0 1 1 2 0 3 2 1 0 1 2 0 0 1 1 0 0 0 20 0 2302.1634 Q04760 Q04760 160 179 GLO1 Lactoylglutathione lyase yes yes 2 1.1489E-15 101.38 By MS/MS By MS/MS 1 1 9182400 5419800 3762600 342 594 356 792;793 637;638 637 2 GLAITFVSDENDAK RAGRFGTKGLAITFVS VSDENDAKILNDVQDR K G L A K I 2 0 1 2 0 0 1 1 0 1 1 1 0 1 0 1 1 0 0 1 0 0 14 0 1478.7253 H0Y400;A0A0G2JJZ9;O00148;Q13838 H0Y400 149 162 DDX39B;DDX39A ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.003041 68.893 By MS/MS By matching 1 1 828970 438170 390800 343 84 357 794;795 639 639 1 GLGTDEDSLIEIICSR SELKASMKGLGTDEDS LIEIICSRTNQELQEI K G L S R T 0 1 0 2 1 0 2 2 0 3 2 0 0 0 0 2 1 0 0 0 0 0 16 0 1776.8564 H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;A6NMY6;H0YLE2;H0YN52;H0YNA0;H0YN28;H0YL33;H0YNP5;H0YM50 H0YMM1 120 135 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 2 0.0032622 61.235 By MS/MS 1 2006200 0 2006200 344 368 358 796 640 640 1 GLKPGVVYEGQLISIQQYGHQEVTR HLNSYTIKGLKPGVVY YGHQEVTRFDFTTTST K G L T R F 0 1 0 0 0 4 2 4 1 2 2 1 0 0 1 1 1 0 2 3 0 0 25 1 2798.4715 P02751 P02751 670 694 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 4 0.0074548 52.321 By MS/MS By MS/MS 1 1 930500 447580 482920 345 485 359 797;798 641;642;643 641 3 GLLQNVHLVFENSVEDILSK SARESHFRGLLQNVHL SVEDILSKKGCQQGQG R G L S K K 0 0 2 1 0 1 2 1 1 1 4 1 0 1 0 2 0 0 0 3 0 0 20 0 2253.2005 P35442 P35442 204 223 THBS2 Thrombospondin-2 yes yes 3 9.7955E-09 85.231 By MS/MS By MS/MS 1 1 5831600 2812600 3018900 346 550 360 799;800 644;645 644 2 GLNSSFETSPK SSFQGSKRGLNSSFET SSFETSPKKVKWSSTV R G L P K K 0 0 1 0 0 0 1 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 11 0 1165.5615 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63 M0QZ79 51 61 VRK3 Inactive serine/threonine-protein kinase VRK3 yes no 2 0.0040065 84.605 By matching By MS/MS 1 1 1141100 553090 587990 347 429 361 801;802 646 646 335 1 GLQHLYALVLVNNK ELRKDDFKGLQHLYAL ALVLVNNKISKIHEKA K G L N K I 1 0 2 0 0 1 0 1 1 0 4 1 0 0 0 0 0 0 1 2 0 0 14 0 1580.9039 P21810 P21810 112 125 BGN Biglycan yes yes 3 0.0041506 51.135 By matching By MS/MS 1 1 1459100 875260 583860 348 538 362 803;804 647 647 1 GLQSSYSEEYLR RRTGAGSKGLQSSYSE SYSEEYLRNLLCRKKL K G L L R N 0 1 0 0 0 1 2 1 0 0 2 0 0 0 0 3 0 0 2 0 0 0 12 0 1430.6678 I3NI08;J3KQI6;Q9BX79 I3NI08 241 252 STRA6 Stimulated by retinoic acid gene 6 protein homolog yes no 2 0.0062132 50.286 By MS/MS By matching 1 1 737550 458380 279180 349 405 363 805;806 648 648 315;906 1 GLTLYPPDILDAMLKEK WYRTHLARGLTLYPPD LDAMLKEKKLAQDQNG R G L E K K 1 0 0 2 0 0 1 1 0 1 4 2 1 0 2 0 1 0 1 0 0 0 17 1 1916.0329 Q49A14;Q6ZU64 Q49A14 62 78 CCDC108 Coiled-coil domain-containing protein 108 yes no 2 0.014439 35.645 By MS/MS 1 0 0 0 350 635 364 807 649 649 1 GLTSLYGLILNNNK EIKENDFKGLTSLYGL GLILNNNKLTKIHPKA K G L N K L 0 0 3 0 0 0 0 2 0 1 4 1 0 0 0 1 1 0 1 0 0 0 14 0 1518.8406 Q9BXN1;Q5TBF2 Q9BXN1 124 137 ASPN Asporin yes no 2 0.0027435 70.399 By MS/MS By MS/MS 1 1 1999900 907480 1092400 351 740 365 808;809 650;651 650 2 GMSVYGLGR TNKVASQKGMSVYGLG MSVYGLGRQVYDPKYC K G M G R Q 0 1 0 0 0 0 0 3 0 0 1 0 1 0 0 1 0 0 1 1 0 0 9 0 938.46439 Q15417 Q15417 257 265 CNN3 Calponin-3 yes yes 2 0.013474 58.917 By MS/MS By matching 1 1 766780 439010 327780 352 626 366 810;811 652 652 935 1 GNAEGSSDEEGKLVIDEPAK AEGDGDKKGNAEGSSD LVIDEPAKEKNEKGAL K G N A K E 2 0 1 2 0 0 4 3 0 1 1 2 0 0 1 2 0 0 0 1 0 0 20 1 2043.9597 P51858 P51858 127 146 HDGF Hepatoma-derived growth factor yes yes 2 0.0010372 68.044 By matching By MS/MS 1 1 2434300 1085700 1348600 353 566 367 812;813 653 653 436;437 1 GNAEGSSDEEGKLVIDEPAKEK AEGDGDKKGNAEGSSD IDEPAKEKNEKGALKR K G N E K N 2 0 1 2 0 0 5 3 0 1 1 3 0 0 1 2 0 0 0 1 0 0 22 2 2301.0972 P51858 P51858 127 148 HDGF Hepatoma-derived growth factor yes yes 3 0.0071777 50.539 By MS/MS By matching 1 1 7144800 2805300 4339500 354 566 368 814;815 654 654 436;437 1 GNDPLTSSPGR SSPAQRRRGNDPLTSS PLTSSPGRSSRRTDAL R G N G R S 0 1 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 11 0 1099.5258 C9J013;C9JZ21;F8WDM3;P49736 C9J013 11 21 MCM2 DNA replication licensing factor MCM2 yes no 2 1.345E-154 179.83 By MS/MS By MS/MS 1 1 7191200 3484800 3706400 355 171 369 816;817 655;656;657;658 658 127 4 GNFNYIEFTR REAPIDKKGNFNYIEF FNYIEFTRILKHGAKD K G N T R I 0 1 2 0 0 0 1 1 0 1 0 0 0 2 0 0 1 0 1 0 0 0 10 0 1259.5935 J3QRS3;P19105;O14950 J3QRS3 157 166 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 2 0.012703 63.816 By MS/MS By matching 1 1 628590 267560 361030 356 414 370 818;819 659 659 1 GNPTVEVDLYTAK AREILDSRGNPTVEVD EVDLYTAKGLFRAAVP R G N A K G 1 0 1 1 0 0 1 1 0 0 1 1 0 0 1 0 2 0 1 2 0 0 13 0 1405.7089 F5H1C3;F5H0C8;P09104 F5H1C3 16 28 ENO2 Enolase;Gamma-enolase yes no 2 0.010224 59.265 By MS/MS By matching 1 1 702970 317670 385300 357 289 371 820;821 660 660 1 GPPDFSSDEEREPTPVLGSGAAAAGR LPAGTNSKGPPDFSSD SGAAAAGRSRAAVGRK K G P G R S 4 2 0 2 0 0 3 4 0 0 1 0 0 1 4 3 1 0 0 1 0 0 26 1 2569.2045 G5E972;P42167;P42166 G5E972 61 86 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes no 3 6.1605E-05 55.158 By matching By MS/MS 1 1 4878300 2487600 2390800 358 331 372 822;823 661 661 267;268 1 GPQPPTVSPIR QKQNDTPKGPQPPTVS PPTVSPIRSSRPPPAK K G P I R S 0 1 0 0 0 1 0 1 0 1 0 0 0 0 4 1 1 0 0 1 0 0 11 0 1147.635 P46087 P46087 779 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0.010592 79.283 By matching By MS/MS 1 1 2801200 1194800 1606400 359 557 373 824;825 662 662 427 1 GRLQQEAAATGSR PGAGGVKRGRLQQEAA EAAATGSRVTVVLGAQ R G R S R V 3 2 0 0 0 2 1 2 0 0 1 0 0 0 0 1 1 0 0 0 0 0 13 1 1343.6906 Q8N142 Q8N142 20 32 ADSSL1 Adenylosuccinate synthetase isozyme 1 yes yes 2 0.013797 45.158 By MS/MS By matching 1 1 552120 309410 242710 360 686 374 826;827 663 663 225;226 540 1 GSDFSSLGDGQLRK G S R K 0 1 0 2 0 1 0 3 0 0 2 1 0 1 0 3 0 0 0 0 0 0 14 1 1465.7161 REV__Q9UKB5 yes yes 2 0.01403 44.511 By matching By MS/MS 1 2 817580 303940 513640 + 361 810 375 828;829;830 664 664 669 1 GSSPGPRPVEGTPASR KTKSQTHRGSSPGPRP VEGTPASRTQDPSSPG R G S S R T 1 2 0 0 0 0 1 3 0 0 0 0 0 0 4 3 1 0 0 1 0 0 16 1 1550.7801 Q13112 Q13112 408 423 CHAF1B Chromatin assembly factor 1 subunit B yes yes 3 0.0076135 51.265 By MS/MS By MS/MS 1 1 5021900 2327900 2694000 362 608 376 831;832 665;666 665 468;469 2 GSTEEGKTLSVLLLEHK DVDTVQPKGSTEEGKT SVLLLEHKEDLIQCVT K G S H K E 0 0 0 0 0 0 3 2 1 0 4 2 0 0 0 2 2 0 0 1 0 0 17 1 1839.9942 B1AKC8;Q9NUA8 B1AKC8 342 358 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 3 0.010051 47.688 By MS/MS By matching 1 1 2318600 836780 1481800 363 138 377 833;834 667 667 112 1 GSVPNQMMPRITP LPDPSMIRGSVPNQMM QMMPRITP________ R G S T P - 0 1 1 0 0 1 0 1 0 1 0 0 2 0 3 1 1 0 0 1 0 0 13 1 1426.7061 A0A0U1RR87 A0A0U1RR87 175 187 yes yes 2 0.0068679 62.463 By MS/MS 1 0 0 0 364 101 378 835 668 668 137 1 GTHVDLGLASANVDFAFSLYK LTQENQDRGTHVDLGL DFAFSLYKQLVLKAPD R G T Y K Q 3 0 1 2 0 0 0 2 1 0 3 1 0 2 0 2 1 0 1 2 0 0 21 0 2224.1164 G3V595;P01011 G3V595 42 62 SERPINA3 Alpha-1-antichymotrypsin;Alpha-1-antichymotrypsin His-Pro-less yes no 3 2.1447E-08 82.635 By MS/MS 1 1905100 0 1905100 365 326 379 836 669;670 670 2 GTTITLVLKEEASDYLELDTIK PRGNTLGRGTTITLVL YLELDTIKNLVKKYSQ R G T I K N 1 0 0 2 0 0 3 1 0 2 4 2 0 0 0 1 4 0 1 1 0 0 22 1 2451.2996 P14625;Q96GW1 P14625 244 265 HSP90B1 Endoplasmin yes no 3 0.014646 40.622 By MS/MS 1 3227500 0 3227500 366 523 380 837 671 671 1 GTTQPQVPSGKENIAPQPQTPHGAVLLAPTPPGK KAPNHFRKGTTQPQVP LAPTPPGKNSCGPLLL K G T G K N 3 0 1 0 0 4 1 4 1 1 2 2 0 0 8 1 4 0 0 2 0 0 34 1 3412.8103 M0QZH7;M0R2D7;B4DX56;Q8IXT2 M0QZH7 116 149 DMRTC2 Doublesex- and mab-3-related transcription factor C2 yes no 3 0.0097557 41.133 By MS/MS 1 0 0 0 367 150 381 838 672 672 144;145 710;711 1 GTYVPSSPTR TYGAAAGKGTYVPSSP YVPSSPTRLAYTDDLG K G T T R L 0 1 0 0 0 0 0 1 0 0 0 0 0 0 2 2 2 0 1 1 0 0 10 0 1063.5298 Q9Y4P8 Q9Y4P8 407 416 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 yes yes 2 0.012188 77.124 By MS/MS 1 1023800 1023800 0 368 799 382 839 673 673 662;663 1 GVDEVTIVNILTNR IETAIKTKGVDEVTIV IVNILTNRSNAQRQDI K G V N R S 0 1 2 1 0 0 1 1 0 2 1 0 0 0 0 0 2 0 0 3 0 0 14 0 1541.8413 H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;H0YMD9;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4 H0YMM1 50 63 ANXA2 Annexin;Annexin A2 yes no 2;3 0.00031976 101.89 By MS/MS 2 8239000 0 8239000 369 368 383 840;841 674;675 675 2 GVEEEEEDGEMRE CNNVLYIRGVEEEEED EEDGEMRE________ R G V R E - 0 1 0 1 0 0 7 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 13 1 1536.5886 P62306 P62306 74 86 SNRPF Small nuclear ribonucleoprotein F yes yes 2 2.5797E-09 114.89 By matching By MS/MS 1 1 515070 280460 234610 370 579 384 842;843 676 676 1 GVLMSKRQTVEQVQK ________________ QTVEQVQKVSLAVSAF M G V Q K V 0 1 0 0 0 3 1 1 0 0 1 2 1 0 0 1 1 0 0 3 0 0 15 2 1729.9509 Q9UPV7 Q9UPV7 2 16 KIAA1045 Protein KIAA1045 yes yes 3 0.007096 46.88 By MS/MS By matching 1 1 697840 317360 380480 371 786 385 844;845 677 677 644;856 1 GVPQIEVTFDIDANGIVHVSAK IGIPPAPRGVPQIEVT GIVHVSAKDKGTGREQ R G V A K D 2 0 1 2 0 1 1 2 1 3 0 1 0 1 1 1 1 0 0 4 0 0 22 0 2308.2063 H0Y8S0;P38646 H0Y8S0 36 57 HSPA9 Stress-70 protein, mitochondrial yes no 3 0.00028697 62.19 By MS/MS By matching 1 1 3455100 2181000 1274100 372 349 386 846;847 678 678 1 GYAFIEFASFEDAK QNQNGKSKGYAFIEFA FASFEDAKEALNSCNK K G Y A K E 3 0 0 1 0 0 2 1 0 1 0 1 0 3 0 1 0 0 1 0 0 0 14 0 1593.7351 P19338;H7BY16 P19338 524 537 NCL Nucleolin yes no 2 1.1892E-10 122.51 By MS/MS By MS/MS 1 1 3989400 1619700 2369700 373 532 387 848;849 679;680 680 2 GYPSKSEKLWSMEK SSFILENKGYPSKSEK EKLWSMEKMKTYFCLI K G Y E K M 0 0 0 0 0 0 2 1 0 0 1 3 1 0 1 3 0 1 1 0 0 0 14 2 1668.8181 Q9NXL9 Q9NXL9 510 523 MCM9 DNA helicase MCM9 yes yes 2 0.014939 52.725 By MS/MS By matching 2 1 23367000 15955000 7411600 374 768 388 850;851;852 681 681 99 1 GYSFTTTAER LMKILTERGYSFTTTA SFTTTAEREIVRDIKE R G Y E R E 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 1 3 0 1 0 0 0 10 0 1131.5197 P63261;P60709;I3L4N8;I3L3I0;I3L1U9 P63261 197 206 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2 0.0089709 71.349 By MS/MS By matching 1 1 2675300 1238400 1436900 375 576 389 853;854 682 682 1 HASAPSHVQPSDSEK QKSQPRRRHASAPSHV VQPSDSEKNRTMLFQV R H A E K N 2 0 0 1 0 1 1 0 2 0 0 1 0 0 2 4 0 0 0 1 0 0 15 0 1575.7277 O60343 O60343 339 353 TBC1D4 TBC1 domain family member 4 yes yes 3 0.0010126 77.633 By MS/MS By MS/MS 1 1 1576400 968100 608260 376 452 390 855;856 683;684 683 365 2 HFLENLVTAFDVGSEK RFNFRLVRHFLENLVT AFDVGSEKTRIGLAQY R H F E K T 1 0 1 1 0 0 2 1 1 0 2 1 0 2 0 1 1 0 0 2 0 0 16 0 1804.8996 Q05707;H0YBB2;Q4G0W3 Q05707 179 194 COL14A1 Collagen alpha-1(XIV) chain yes no 3 0.0026859 54.004 By MS/MS By MS/MS 1 1 2781100 1061000 1720100 377 596 391 857;858 685;686 685 2 HFLPAQHSTAATLMPTLVRR FYKTFRPKHFLPAQHS LMPTLVRRSLPAPLVV K H F R R S 3 2 0 0 0 1 0 0 2 0 3 0 1 1 2 1 3 0 0 1 0 0 20 1 2246.2106 H0YDI0 H0YDI0 184 203 CEP126 yes yes 3 0.014468 14.928 By MS/MS 1 129440 0 129440 378 357 392 859 687 687 0 HGESAWNLENR AYKLVLIRHGESAWNL SAWNLENRFSGWYDAD R H G N R F 1 1 2 0 0 0 2 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 11 0 1311.5956 P18669 P18669 11 21 PGAM1 Phosphoglycerate mutase 1 yes yes 2 3.4239E-05 113.24 By matching By MS/MS 1 1 2661300 1132600 1528700 379 529 393 860;861 688 688 410 1 HGLAHDEMKSPR ISPSTFRKHGLAHDEM HDEMKSPREPGYKAEG K H G P R E 1 1 0 1 0 0 1 1 2 0 1 1 1 0 1 1 0 0 0 0 0 0 12 1 1376.6619 Q9Y2W1 Q9Y2W1 689 700 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.008571 58.32 By matching By MS/MS 1 1 489700 259210 230490 380 792 394 862;863 689 689 656 1 HGLLLPASPVR NSTTFPSRHGLLLPAS LLPASPVRMHSSRLHQ R H G V R M 1 1 0 0 0 0 0 1 1 0 3 0 0 0 2 1 0 0 0 1 0 0 11 0 1158.6873 Q96E09 Q96E09 69 79 FAM122A Protein FAM122A yes yes 2 0.010846 69.864 By matching By MS/MS 1 1 1315000 598940 716050 381 717 395 864;865 690 690 572 1 HHPEHFSGR TITGYRIRHHPEHFSG HPEHFSGRPREDRVPH R H H G R P 0 1 0 0 0 0 1 1 3 0 0 0 0 1 1 1 0 0 0 0 0 0 9 0 1102.5057 P02751;H0Y7Z1 P02751 1392 1400 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 0.0032504 80.688 By MS/MS By MS/MS 1 1 323370 146490 176880 382 485 396 866;867 691;692 691 2 HIKEEPLSEEEPCTSTAIASPEKK KKKRGKKKHIKEEPLS AIASPEKKKKKKKKRE K H I K K K 2 0 0 0 1 0 6 0 1 2 1 3 0 0 3 3 2 0 0 0 0 0 24 2 2709.3167 Q9Y2X3 Q9Y2X3 495 518 NOP58 Nucleolar protein 58 yes yes 4 0.001811 50.323 By matching By MS/MS 1 1 2094000 819790 1274300 383 793 397 868;869 693 693 658 1 HLHFVDVDDLHIIVQELR AASAPAEKHLHFVDVD HIIVQELRGSILDAMR K H L L R G 0 1 0 3 0 1 1 0 3 2 3 0 0 1 0 0 0 0 0 3 0 0 18 0 2197.1644 Q6PCB0 Q6PCB0 189 206 VWA1 von Willebrand factor A domain-containing protein 1 yes yes 3;4 7.8371E-22 116.87 By MS/MS By MS/MS 2 2 4533800 2168300 2365500 384 662 398 870;871;872;873 694;695;696 696 3 HPDIYAVPIK ARIEIAQKHPDIYAVP DIYAVPIKTHKPDPGT K H P I K T 1 0 0 1 0 0 0 0 1 2 0 1 0 0 2 0 0 0 1 1 0 0 10 0 1151.6339 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1173 1182 TJP2 Tight junction protein ZO-2 yes no 2 0.0060912 62.2 By matching By MS/MS 1 1 568370 305140 263230 385 107 399 874;875 697;698;699 698 870 3 HPDYSVVLLLR FLYEYARRHPDYSVVL YSVVLLLRLAKTYETT R H P L R L 0 1 0 1 0 0 0 0 1 0 3 0 0 0 1 1 0 0 1 2 0 0 11 0 1310.7347 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;C9JKR2 A0A0C4DGB6 362 372 ALB Serum albumin yes no 2;3 0.00088458 90.827 By MS/MS By matching 2 1 2402100 1318700 1083500 + 386 77 400 876;877;878 700;701 700 2 HPGGGDYEEL GGGAPGGRHPGGGDYE GGGDYEEL________ R H P E L - 0 0 0 1 0 0 2 3 1 0 1 0 0 0 1 0 0 0 1 0 0 0 10 0 1072.4462 H0Y4Z8;Q3YEC7 H0Y4Z8 721 730 RABL6 Rab-like protein 6 yes no 2 0.0044958 66.682 By matching By MS/MS 1 1 1363400 512360 851080 387 340 401 879;880 702 702 899 1 HPYFYAPELLFFAK YLYEIARRHPYFYAPE PELLFFAKRYKAAFTE R H P A K R 2 0 0 0 0 0 1 0 1 0 2 1 0 3 2 0 0 0 2 0 0 0 14 0 1741.8868 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;H7C013 A0A0C4DGB6 170 183 ALB Serum albumin yes no 2;3 1.7537E-31 141.58 By MS/MS By MS/MS 3 2 25100000 10084000 15016000 + 388 77 402 881;882;883;884;885 703;704;705;706 705 4 HQQQLLASPGSSTVDNK RLHGQLQRHQQQLLAS GSSTVDNKMLDDLYED R H Q N K M 1 0 1 1 0 3 0 1 1 0 2 1 0 0 1 3 1 0 0 1 0 0 17 0 1808.9017 F2Z2X4;Q9C0E2 F2Z2X4 514 530 XPO4 Exportin-4 yes no 3 0.0006095 65.416 By MS/MS 1 527850 527850 0 389 280 403 886 707;708 708 223 2 HRPSPPATPPPK SASPPRRRHRPSPPAT PPATPPPKTRHSPTPQ R H R P K T 1 1 0 0 0 0 0 0 1 0 0 1 0 0 6 1 1 0 0 0 0 0 12 1 1280.699 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 394 405 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.012421 44.614 By matching By MS/MS 1 1 1079100 264370 814680 390 133 404 887;888 709;710 709 102;707 2 HTDDEMTGYVATR ILDFGLARHTDDEMTG MTGYVATRWYRAPEIM R H T T R W 1 1 0 2 0 0 1 1 1 0 0 0 1 0 0 0 3 0 1 1 0 0 13 0 1494.6409 E7EX54;B4E0K5;Q16539 E7EX54 97 109 MAPK14 Mitogen-activated protein kinase 14 yes no 2;3 0.00040598 94.688 By MS/MS By MS/MS 2 3 9197600 3962700 5234900 391 152 405 889;890;891;892;893 711;712;713 713 876 3 HTGPNSPDTANDGFVR VEMDWVLKHTGPNSPD TANDGFVRLRGLPFGC K H T V R L 1 1 2 2 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 16 0 1683.7601 G8JLB6;P31943;E5RGH4;E7EQJ0;D6RAM1;H0YAQ2;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RIU0;D6RDU3;D6RJ04;D6RIH9;D6RBM0;E9PCY7;P55795 G8JLB6 99 114 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 yes no 2;3 0.0020107 59.857 By MS/MS By MS/MS 2 2 31290000 15638000 15652000 392 334 406 894;895;896;897 714;715;716 715 271;753 3 HVFFVDDFDAFK IGSKPSARHVFFVDDF VDDFDAFKKIEDELIT R H V F K K 1 0 0 3 0 0 0 0 1 0 0 1 0 4 0 0 0 0 0 2 0 0 12 0 1485.6929 Q05707;A0A0A0MQT7 Q05707 1188 1199 COL14A1 Collagen alpha-1(XIV) chain yes no 2 0.0050447 76.221 By MS/MS By matching 1 1 1028900 468410 560490 393 596 407 898;899 717 717 1 HVFIVDDFESFEK IASKPSERHVFIVDDF DDFESFEKIEDNLITF R H V E K I 0 0 0 2 0 0 2 0 1 1 0 1 0 3 0 1 0 0 0 2 0 0 13 0 1610.7617 D6RGG3;Q99715;A0A087X0A8;H0Y5N9;H0Y991 D6RGG3 2479 2491 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.005738 74.162 By MS/MS By MS/MS 1 1 1545000 780200 764850 394 218 408 900;901 718;719 719 2 HVIILMTDGLHNMGGDPITVIDEIR PEGWNRTRHVIILMTD ITVIDEIRDLLYIGKD R H V I R D 0 1 1 3 0 0 1 3 2 5 2 0 2 0 1 0 2 0 0 2 0 0 25 0 2758.4146 A0A0G2JH38;E7ETN3;B4E1Z4;P00751 A0A0G2JH38 382 406 CFB Complement factor B;Complement factor B Ba fragment;Complement factor B Bb fragment yes no 3;4 0.00091475 51.777 By MS/MS By MS/MS 2 3 5665200 1784900 3880300 395 82 409;410 902;903;904;905;906 720;721;722 722 16;17 2 HYEDGYPGGSDNYGSLSR YPPDGYSRHYEDGYPG DNYGSLSRVTRIEERY R H Y S R V 0 1 1 2 0 0 1 4 1 0 1 0 0 0 1 3 0 0 3 0 0 0 18 0 1972.8187 C9JZR2;O60716;E9PRE2 C9JZR2 216 233 CTNND1 Catenin delta-1 yes no 3 1.0055E-49 142.4 By MS/MS By MS/MS 1 1 3542700 1822500 1720200 396 195 411 907;908 723;724 724 882 2 HYFQNTQGLIFVVDSNDR DKIRPLWRHYFQNTQG FVVDSNDRERVNE___ R H Y D R E 0 1 2 2 0 2 0 1 1 1 1 0 0 2 0 1 1 0 1 2 0 0 18 0 2152.0338 F5H0C7;C9JPM4;C9J1Z8;C9JAK5;F5H423;P84085;P18085;P84077;P61204 F5H0C7 80 97 ARF3;ARF4;ARF5;ARF1 ADP-ribosylation factor 5;ADP-ribosylation factor 4;ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 3 0.010457 38.777 By MS/MS 1 162200 0 162200 397 177 412 909 725 725 1 HYYIAAEEIIWNYAPSGIDIFTK NIRGKHVRHYYIAAEE SGIDIFTKENLTAPGS R H Y T K E 3 0 1 1 0 0 2 1 1 5 0 1 0 1 1 1 1 1 3 0 0 0 23 0 2713.3428 H7C5R1;E9PFZ2;P00450 H7C5R1 156 178 CP Ceruloplasmin yes no 3 2.6305E-160 168.3 By MS/MS By MS/MS 1 1 43127000 15798000 27329000 398 252 413 910;911 726;727 726 2 IADPEHDHTGFLTEYVATR ICDFGLARIADPEHDH LTEYVATRWYRAPEIM R I A T R W 2 1 0 2 0 0 2 1 2 1 1 0 0 1 1 0 3 0 1 1 0 0 19 0 2171.0283 B3KR49;E9PJF0;E9PQW4;P27361 B3KR49 76 94 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 3 0.003828 53.21 By matching By MS/MS 1 1 8480000 3326400 5153700 399 143 414 912;913 728 728 875 1 IALVITDGR LPPSPNNRIALVITDG ALVITDGRSDTQRDTT R I A G R S 1 1 0 1 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 956.56548 A0A087X0S5;P12109 A0A087X0S5 721 729 COL6A1 Collagen alpha-1(VI) chain yes no 2 0.010343 85.212 By matching By MS/MS 1 1 564230 230730 333500 400 43 415 914;915 729 729 1 IAVDWESLGYNITR IAEIQARRIAVDWESL SLGYNITRCHTFNVTI R I A T R C 1 1 1 1 0 0 1 1 0 2 1 0 0 0 0 1 1 1 1 1 0 0 14 0 1635.8257 Q5TG12;E9PGC5;Q15262 Q5TG12 406 419 PTPRK Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase kappa yes no 2 0.010799 45.908 By MS/MS 1 0 0 0 401 253 416 916 730 730 35 1 ICEPCCPPECGPR I C P R 0 1 0 0 4 0 2 1 0 1 0 0 0 0 4 0 0 0 0 0 0 0 13 0 1630.636 REV__J3QRB8 yes no 3 0.013056 30.023 By MS/MS 1 321240 321240 0 + 402 805 417 917 731 731 1 IDASKNEEDEGHSNSSPR AATAAGAKIDASKNEE GHSNSSPRHSEAATAQ K I D P R H 1 1 2 2 0 0 3 1 1 1 0 1 0 0 1 4 0 0 0 0 0 0 18 1 1970.8566 D6RD83;D6RAF8;Q14103 D6RD83 22 39 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 3 2.8139E-16 107.73 By MS/MS By MS/MS 2 1 23398000 13837000 9560300 403 211 418 918;919;920 732;733;734 734 153;154 3 IDISPSTLRK KSPEIHRRIDISPSTL ISPSTLRKHTRLAGEE R I D R K H 0 1 0 1 0 0 0 0 0 2 1 1 0 0 1 2 1 0 0 0 0 0 10 1 1128.6503 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 653 662 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.01203 56.81 By MS/MS 1 622280 0 622280 404 264 419 921 735 735 203 1 IEDGVPQHLVLVLGGK FVKSAGSRIEDGVPQH LVLVLGGKSQDDVSRF R I E G K S 0 0 0 1 0 1 1 3 1 1 3 1 0 0 1 0 0 0 0 3 0 0 16 0 1672.9512 E7ENL6;P12111 E7ENL6 929 944 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.013879 35.35 By MS/MS By matching 1 1 538890 288270 250620 405 227 420 922;923 736 736 1 IEDVGSDEEDDSGK KDDEEKPKIEDVGSDE DEEDDSGKDKKKKTKK K I E G K D 0 0 0 4 0 0 3 2 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 0 1493.6005 P08238;Q58FF8 P08238 250 263 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 4.7562E-10 120.7 By MS/MS By MS/MS 1 1 7742300 2767300 4975000 406 504 421 924;925 737;738;739;740;741 740 396 5 IEDVGSDEEDDSGKDK KDDEEKPKIEDVGSDE EDDSGKDKKKKTKKIK K I E D K K 0 0 0 5 0 0 3 2 0 1 0 2 0 0 0 2 0 0 0 1 0 0 16 1 1736.7224 P08238;Q58FF8 P08238 250 265 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 0 252.37 By MS/MS By MS/MS 2 3 39993000 10545000 29448000 407 504 422 926;927;928;929;930 742;743;744;745;746 745 396 5 IEDVGSDEEDDSGKDKK KDDEEKPKIEDVGSDE DDSGKDKKKKTKKIKE K I E K K K 0 0 0 5 0 0 3 2 0 1 0 3 0 0 0 2 0 0 0 1 0 0 17 2 1864.8174 P08238;Q58FF8 P08238 250 266 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 1.8917E-20 115.04 By MS/MS By MS/MS 3 3 48731000 21573000 27158000 408 504 423 931;932;933;934;935;936 747;748;749;750;751;752;753 752 396 7 IEEGVPQFLVLISSGK FKRPLGSRIEEGVPQF LVLISSGKSDDEVDDP R I E G K S 0 0 0 0 0 1 2 2 0 2 2 1 0 1 1 2 0 0 0 2 0 0 16 0 1714.9505 E7ENL6;P12111 E7ENL6 725 740 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.00028968 84.892 By MS/MS By matching 1 1 9166000 5200100 3965900 409 227 424 937;938 754 754 1 IEIESFYEGEDFSETLTR LSSQHQARIEIESFYE DFSETLTRAKFEELNM R I E T R A 0 1 0 1 0 0 5 1 0 2 1 0 0 2 0 2 2 0 1 0 0 0 18 0 2163.9848 P11021 P11021 307 324 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.00020117 79.466 By MS/MS By MS/MS 1 2 7934600 3248500 4686100 410 517 425 939;940;941 755;756 756 2 IEKIGEGTYGVVYK ________________ GTYGVVYKGRHKTTGQ K I E Y K G 0 0 0 0 0 0 2 3 0 2 0 2 0 0 0 0 1 0 2 2 0 0 14 1 1554.8294 E5RIU6;A0A087WZZ9;A0A024QZP7;P06493 E5RIU6 7 20 CDK1;CDC2 Cyclin-dependent kinase 1 yes no 3 0.0014031 61.657 By matching By MS/MS 1 1 466230 244460 221770 411 0 426 942;943 757 757 670;861 1 IETVAQSMPQSPR SGSSKSGRIETVAQSM QSMPQSPRPGDRAPSS R I E P R P 1 1 0 0 0 2 1 0 0 1 0 0 1 0 2 2 1 0 0 1 0 0 13 0 1442.7188 H0YK69;Q7Z5M5 H0YK69 785 797 TMC3 Transmembrane channel-like protein;Transmembrane channel-like protein 3 yes no 2 0.013758 41.283 By MS/MS 1 0 0 0 412 365 427 944 758 758 181 37 1 IEVLEEELR DLKLKNTKIEVLEEEL EVLEEELRLARDANSE K I E L R L 0 1 0 0 0 0 4 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1128.6027 P15924 P15924 1034 1042 DSP Desmoplakin yes yes 2 0.014666 74.301 By matching By MS/MS 1 1 1245600 600530 645100 413 524 428 945;946 759 759 1 IEVQPKPHHR QSGSYELRIEVQPKPH VQPKPHHRAHYETEGS R I E H R A 0 1 0 0 0 1 1 0 2 1 0 1 0 0 2 0 0 0 0 1 0 0 10 1 1239.6836 Q13469 Q13469 412 421 NFATC2 Nuclear factor of activated T-cells, cytoplasmic 2 yes yes 2 0.0066972 75.378 By MS/MS By matching 1 1 4169200 1768700 2400500 414 612 429 947;948 760 760 1 IFGVTTLDIVR HGVYNPNKIFGVTTLD VTTLDIVRANTFVAEL K I F V R A 0 1 0 1 0 0 0 1 0 2 1 0 0 1 0 0 2 0 0 2 0 0 11 0 1232.7129 G3XAL0;P40926 G3XAL0 59 69 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 2 0.009883 64.711 By MS/MS 1 144590 0 144590 415 329 430 949 761 761 1 IFSLSGTLETVR QLRERHWRIFSLSGTL SGTLETVRGRGVVGRE R I F V R G 0 1 0 0 0 0 1 1 0 1 2 0 0 1 0 2 2 0 0 1 0 0 12 0 1321.7242 B4DEM9;Q9Y2S7 B4DEM9 268 279 POLDIP2 Polymerase delta-interacting protein 2 yes no 2 0.014765 62.799 By MS/MS 1 200920 200920 0 416 145 431 950 762 762 116 1 IFTSIGEDYDER PVASQLPRIFTSIGED IGEDYDERVLPSITT_ R I F E R V 0 1 0 2 0 0 2 1 0 2 0 0 0 1 0 1 1 0 1 0 0 0 12 0 1443.6518 D6RBK0;C9JZ20;E7ESE2;E9PCW0;C9JW96;P35232 D6RBK0 106 117 PHB Prohibitin yes no 2 0.0071615 65.627 By MS/MS By matching 1 1 402930 148890 254040 417 192 432 951;952 763 763 1 IFVEESIYDEFVR QCCIAASRIFVEESIY SIYDEFVRRSVERAKK R I F V R R 0 1 0 1 0 0 3 0 0 2 0 0 0 2 0 1 0 0 1 2 0 0 13 0 1644.8035 P00352 P00352 309 321 ALDH1A1 Retinal dehydrogenase 1 yes yes 2 0.0014753 82.417 By MS/MS By MS/MS 1 1 2683200 1216900 1466400 418 474 433 953;954 764;765 764 2 IGEGTYGVVYK ENFQKVEKIGEGTYGV GTYGVVYKARNKLTGE K I G Y K A 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 0 11 0 1184.6077 G3V317;K7ELV5;E7ESI2;G3V5T9;P24941;Q00526;E5RIU6;A0A087WZZ9;A0A024QZP7;P06493 E5RIU6 10 20 CDK2;CDK3;CDK1;CDC2 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3;Cyclin-dependent kinase 1 no no 2 0.0026446 78.264 By MS/MS By MS/MS 2 2 46333000 20843000 25489000 419 234;0 434;435 955;956;957;958 766;767 767 670;727;861;886 2 IHRASDPGLPAEEPKEK GRFHLPPRIHRASDPG PAEEPKEKSSRKVAEP R I H E K S 2 1 0 1 0 0 3 1 1 1 1 2 0 0 3 1 0 0 0 0 0 0 17 2 1872.9694 F8VPD4;P27708 F8VPD4 1792 1808 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 3;4 0.00033027 71.781 By MS/MS By MS/MS 1 2 4103100 1476800 2626300 420 301 436 959;960;961 768;769;770 768 243 2 IHSPIPDMSK TSPSTATKIHSPIPDM SPIPDMSKFATGITPF K I H S K F 0 0 0 1 0 0 0 0 1 2 0 1 1 0 2 2 0 0 0 0 0 0 10 0 1123.5696 Q6NZY4 Q6NZY4 656 665 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 2 2.9451E-12 137.01 By MS/MS By MS/MS 1 1 1857200 860050 997130 421 659 437 962;963 771;772 772 514 2 IIEVEEEQEDPYLNDR GGLQETDKIIEVEEEQ EDPYLNDRCR______ K I I D R C 0 1 1 2 0 1 5 0 0 2 1 0 0 0 1 0 0 0 1 1 0 0 16 0 1989.9167 B1AHM7;H7C1M6;B1AHM9;B1AHL2;P23142 B1AHM7 122 137 FBLN1 Fibulin-1 yes no 2 0.0011229 64.55 By MS/MS By matching 1 1 833810 416800 417010 422 136 438 964;965 773 773 1 IISFLYSTVGALNK IGDENFNKIISFLYST STVGALNKIGTDGTQV K I I N K I 1 0 1 0 0 0 0 1 0 2 2 1 0 1 0 2 1 0 1 1 0 0 14 0 1524.8552 Q05707;A0A0A0MQT7 Q05707 1051 1064 COL14A1 Collagen alpha-1(XIV) chain yes no 2 2.004E-16 128.81 By MS/MS By MS/MS 1 1 3343700 1572400 1771300 423 596 439 966;967 774;775 775 2 IIVDTYGGWGAHGGGAFSGK DAGVTGRKIIVDTYGG GGGAFSGKDYTKVDRS K I I G K D 2 0 0 1 0 0 0 7 1 2 0 1 0 1 0 1 1 1 1 1 0 0 20 0 1948.9432 Q00266;P31153 Q00266 266 285 MAT1A;MAT2A S-adenosylmethionine synthase isoform type-1;S-adenosylmethionine synthase isoform type-2 yes no 3 0.0064016 44.788 By MS/MS By matching 1 1 782930 323480 459450 424 549 440 968;969 776 776 0 IIYLRPMQQVDTLTLEQK RMPPERNRIIYLRPMQ DTLTLEQKLFSGPYPY R I I Q K L 0 1 0 1 0 3 1 0 0 2 3 1 1 0 1 0 2 0 1 1 0 0 18 1 2188.1926 Q6PIJ6 Q6PIJ6 1000 1017 FBXO38 F-box only protein 38 yes yes 3 0.010976 42.958 By MS/MS 1 0 0 0 425 664 441 970 777 777 221 943 1 IKFMYLGPSS PPSWQDMKIKFMYLGP FMYLGPSS________ K I K S S - 0 0 0 0 0 0 0 1 0 1 1 1 1 1 1 2 0 0 1 0 0 0 10 1 1141.5842 Q9NVV5 Q9NVV5 236 245 AIG1 Androgen-induced gene 1 protein yes yes 2 0.014683 47.082 By matching By MS/MS 1 1 542160 233480 308680 426 763 442 971;972 778 778 98 1 IKNENTEGSPQEDGVELEGLK AEKKNKKKIKNENTEG GVELEGLKQRLEKKQK K I K L K Q 0 0 2 1 0 1 5 3 0 1 2 2 0 0 1 1 1 0 0 1 0 0 21 1 2285.1023 P11388 P11388 1239 1259 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.00025381 71.742 By MS/MS By matching 1 1 4895300 2299900 2595400 427 519 443 973;974 779 779 402 1 ILEQQNSSRTLEK ANWEAQQRILEQQNSS NSSRTLEKNKKKGKIF R I L E K N 0 1 1 0 0 2 2 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 13 1 1544.8158 Q5JXL7;G3V1Q4;E7ES33;E7EPK1;Q16181 Q5JXL7 68 80 DKFZp586I031;SEPT7 Septin-7 yes no 2;3 0.00311 88.108 By MS/MS By MS/MS 2 1 14841000 9948600 4892000 428 231 444 975;976;977 780;781;782 780 168;169;726 3 ILGDMQPGDYFDLVLFGTR QTKEALLKILGDMQPG DLVLFGTRVQSWKGSL K I L T R V 0 1 0 3 0 1 0 3 0 1 3 0 1 2 1 0 1 0 1 1 0 0 19 0 2156.0612 P19827 P19827 318 336 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes yes 2 2.4952E-26 125.53 By MS/MS By MS/MS 1 1 17416000 4998500 12418000 429 534 445 978;979 783;784;785 785 67 3 ILITIVEEVETLR VTVEKVIKILITIVEE VEEVETLRQERLSFSG K I L L R Q 0 1 0 0 0 0 3 0 0 3 2 0 0 0 0 0 2 0 0 2 0 0 13 0 1526.892 Q15149 Q15149 3424 3436 PLEC Plectin yes yes 2 3.7516E-07 104.32 By MS/MS 1 2234500 0 2234500 430 624 446 980 786 786 1 ILITKESPQDSAITRDINR DHLVEKYRILITKESP AITRDINRTFPAHDYF R I L N R T 1 2 1 2 0 1 1 0 0 4 1 1 0 0 1 2 2 0 0 0 0 0 19 2 2169.1753 Q9Y3P9 Q9Y3P9 594 612 RABGAP1 Rab GTPase-activating protein 1 yes yes 3 0.014308 40.856 By MS/MS 1 0 0 0 431 797 447 981 787 787 116;252 661;858 1 ILLAELEQLKGQGK RFLEQQNKILLAELEQ EQLKGQGKSRLGDLYE K I L G K S 1 0 0 0 0 2 2 2 0 1 4 2 0 0 0 0 0 0 0 0 0 0 14 1 1538.9032 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0 P08670 130 143 VIM Vimentin yes no 3 0.0015305 77.185 By MS/MS By matching 1 1 715280 350980 364300 432 507 448 982;983 788 788 1 ILRENYLFVCSCPK RSRHSRHKILRENYLF LFVCSCPKCLAEADEP K I L P K C 0 1 1 0 2 0 1 0 0 1 2 1 0 1 1 1 0 0 1 1 0 0 14 1 1797.8906 Q6GMV2 Q6GMV2 367 380 SMYD5 SET and MYND domain-containing protein 5 yes yes 3 0.012616 42.031 By MS/MS 1 0 0 0 433 655 449 984 789 789 91 511 1 ILSQSTDSLNMR ESPLGLRRILSQSTDS STDSLNMRNRTLS___ R I L M R N 0 1 1 1 0 1 0 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 12 0 1363.6766 V9GYF5;V9GYG5;V9GZ14;V9GYM8;Q92974 V9GYF5 162 173 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 7.5685E-05 103.46 By matching By MS/MS 1 1 1845100 899530 945580 434 713 450 985;986 790 790 567 1 ILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVNR SARATKGRILTVEDHY VTHLAVNRVPRSGKPA R I L N R V 3 1 1 1 0 0 4 5 2 3 2 0 0 0 1 2 3 0 2 6 0 0 36 0 3751.9057 A0A0B4J1R6;P29401 A0A0B4J1R6 390 425 TKT Transketolase yes no 4 0.014922 16.663 By MS/MS 1 726110 0 726110 435 72 451 987 791 791 1 INFDVNGYIVGANIETYLLEK SRFGKFIRINFDVNGY IETYLLEKSRAIRQAK R I N E K S 1 0 3 1 0 0 2 2 0 3 2 1 0 1 0 0 1 0 2 2 0 0 21 0 2384.2264 P35579 P35579 241 261 MYH9 Myosin-9 yes yes 2 7.8839E-09 88.311 By MS/MS By matching 1 1 11236000 5497300 5738600 436 551 452 988;989 792 792 1 INTLKEENTQEAAVLNGVS QRTPGEEKINTLKEEN AAVLNGVS________ K I N V S - 2 0 3 0 0 1 3 1 0 1 2 1 0 0 0 1 2 0 0 2 0 0 19 1 2029.0328 B4DXZ6;P51114 B4DXZ6 590 608 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 3 0.0097815 41.422 By MS/MS By matching 1 1 722200 411220 310980 437 151 453 990;991 793 793 18 119 1 INTQWLLTSGTTEANAWK YVGGAEARINTQWLLT TTEANAWKSTLVGHDT R I N W K S 2 0 2 0 0 1 1 1 0 1 2 1 0 0 0 1 4 2 0 0 0 0 18 0 2033.0218 CON__Streptavidin CON__Streptavidin 105 122 yes yes 3 1.3074E-39 134.76 By MS/MS By MS/MS 1 1 5716900 3465500 2251300 + 438 207 454 992;993 794;795 794 2 INTQWLLTSGTTEANAWKSTLVGHDTFTK YVGGAEARINTQWLLT VGHDTFTKVKPSAASI R I N T K V 2 0 2 1 0 1 1 2 1 1 3 2 0 1 0 2 7 2 0 1 0 0 29 1 3219.62 CON__Streptavidin CON__Streptavidin 105 133 yes yes 4 1.5735E-31 102.27 By MS/MS By MS/MS 1 1 26269000 8955100 17314000 + 439 207 455 994;995 796;797 796 2 ISESKMAFKQMEQISQFLK PGQEPIPKISESKMAF EQISQFLKAAETYGVR K I S L K A 1 0 0 0 0 3 2 0 0 2 1 3 2 2 0 3 0 0 0 0 0 0 19 2 2272.1596 H7C5N2;Q9UI15 H7C5N2 20 38 TAGLN3 Transgelin-3 yes no 3 0.010206 40.693 By MS/MS By matching 1 1 4114800 1881700 2233200 440 398 456 996;997 798 798 192 41 1 ISGLIYEETR ARRGGVKRISGLIYEE GLIYEETRGVLKVFLE R I S T R G 0 1 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1179.6136 P62805 P62805 47 56 HIST1H4A Histone H4 yes yes 2 0.0046184 91.087 By matching By MS/MS 1 1 3093800 1323600 1770100 441 580 457 998;999 799 799 1 ISLSPEYVFSVSTFR ADQEELVKISLSPEYV VFSVSTFRELPSLEQK K I S F R E 0 1 0 0 0 0 1 0 0 1 1 0 0 2 1 4 1 0 1 2 0 0 15 0 1730.8879 E7ENL6;P12111 E7ENL6 774 788 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.002089 66.498 By MS/MS 1 1794100 0 1794100 442 227 458 1000 800 800 1 ISMFLSVREDSVPTTASFR ________________ VPTTASFRVSVRRPRL K I S F R V 1 2 0 1 0 0 1 0 0 1 1 0 1 2 1 4 2 0 0 2 0 0 19 1 2142.0779 G3V318 G3V318 7 25 yes yes 3 0.0063968 49.463 By matching By MS/MS 1 1 52449000 15888000 36561000 443 321 459 1001;1002 801 801 258;259;260;748;749 1 ISSFFCIFSLRR GSSKHCLKISSFFCIF FCIFSLRRFKRRITQR K I S R R F 0 2 0 0 1 0 0 0 0 2 1 0 0 3 0 3 0 0 0 0 0 0 12 1 1531.797 H3BU68 H3BU68 158 169 LPCAT2 yes yes 2 0.012641 55.064 By MS/MS By matching 1 1 7216000 3586000 3630000 444 385 460 1003;1004 802 802 1 ISSKSPGHMVILDQTK KKSEEKKRISSKSPGH MVILDQTKGDHCRPSR R I S T K G 0 0 0 1 0 1 0 1 1 2 1 2 1 0 1 3 1 0 0 1 0 0 16 1 1739.924 Q9NWH9 Q9NWH9 549 564 SLTM SAFB-like transcription modulator yes yes 3 0.011945 42.257 By MS/MS 1 0 0 0 445 764 461 1005 803 803 623;624;625 1 ISSTPTTETIR KSTRRSGRISSTPTTE TPTTETIRGIDSDDVQ R I S I R G 0 1 0 0 0 0 1 0 0 2 0 0 0 0 1 2 4 0 0 0 0 0 11 0 1204.6299 A0A075B754;Q96QE3 A0A075B754 600 610 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.01088 69.815 By matching By MS/MS 1 1 703170 366860 336320 446 5 462 1006;1007 804 804 2 1 ITDERNRQVTFTK RKKIQIQRITDERNRQ NRQVTFTKRKFGLMKK R I T T K R 0 2 1 1 0 1 1 0 0 1 0 1 0 1 0 0 3 0 0 1 0 0 13 2 1606.8427 Q05BX2;Q14814 Q05BX2 11 23 MEF2D Myocyte-specific enhancer factor 2D yes no 2 0.013374 42.743 By MS/MS 1 0 0 0 447 597 463 1008 805 805 810;811 1 ITEGVPQLLIVLTADR LVSSAGSRITEGVPQL LIVLTADRSGDDVRNP R I T D R S 1 1 0 1 0 1 1 1 0 2 3 0 0 0 1 0 2 0 0 2 0 0 16 0 1737.0036 E7ENL6;P12111 E7ENL6 521 536 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.00027451 84.169 By MS/MS By MS/MS 1 1 8339700 4350900 3988800 448 227 464 1009;1010 806;807 807 2 ITFELVYEELLK VSVAPNAKITFELVYE LVYEELLKRRLGVYEL K I T L K R 0 0 0 0 0 0 3 0 0 1 3 1 0 1 0 0 1 0 1 1 0 0 12 0 1495.8174 H7C0L5;B7ZKJ8;Q14624 H7C0L5 10 21 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 0.011352 60.434 By MS/MS By MS/MS 1 1 5724300 1965800 3758400 449 165 465 1011;1012 808;809 809 2 IVAHAVEVPAVQSPR RKPIVLKRIVAHAVEV VPAVQSPRRSPRAAGP R I V P R R 3 1 0 0 0 1 1 0 1 1 0 0 0 0 2 1 0 0 0 4 0 0 15 0 1571.8784 H0YCL8;B5MBX0;Q96FF9 H0YCL8 10 24 CDCA5 Sororin yes no 3 0.0022094 62.203 By MS/MS 1 0 0 0 450 153 466 1013 810 810 120 1 IVRGDQPAASGDSDDDEPPPLPR LCIFLLYKIVRGDQPA DEPPPLPRLKRRDFTP K I V P R L 2 2 0 5 0 1 1 2 0 1 1 0 0 0 5 2 0 0 0 1 0 0 23 1 2403.1302 O00264 O00264 45 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 0.00033288 59.814 By MS/MS By MS/MS 1 1 2769400 1171000 1598400 451 433 467 1014;1015 811;812 812 342;343 2 IWHHTFYNELR TNWDDMEKIWHHTFYN HTFYNELRVAPEEHPV K I W L R V 0 1 1 0 0 0 1 0 2 1 1 0 0 1 0 0 1 1 1 0 0 0 11 0 1514.7419 P63261;P60709;I3L4N8;Q6S8J3;I3L3I0;I3L1U9;P68133;P68032;A5A3E0;C9JUM1;C9JZR7;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;A6NL76;Q9BYX7;P0CG39;P0CG38 P63261 85 95 ACTG1;ACTB;POTEE;ACTA1;ACTC1;POTEF;POTEKP;POTEJ;POTEI Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J;POTE ankyrin domain family member I yes no 3 6.7386E-06 117.09 By MS/MS By MS/MS 1 1 2442500 1270500 1172000 452 576 468 1016;1017 813;814 814 2 IYHLPDAESDEDEDFKEQTR EIEEHNIKIYHLPDAE EDFKEQTRLLKASIPF K I Y T R L 1 1 0 4 0 1 4 0 1 1 1 1 0 1 1 1 1 0 1 0 0 0 20 1 2436.0717 H7C2Y0;B5MCX3;Q15019 H7C2Y0 65 84 SEPT2 Septin-2 yes no 3 0.0086383 52.657 By MS/MS By matching 1 1 49058000 20884000 28175000 453 157 469 1018;1019 815 815 121 1 IYLSDSLTGKFYNIGDQR LCNSLRYKIYLSDSLT FYNIGDQRGHGEDHCQ K I Y Q R G 0 1 1 2 0 1 0 2 0 2 2 1 0 1 0 2 1 0 2 0 0 0 18 1 2089.048 H0Y897;D3YTG3;Q7Z7G0 H0Y897 1045 1062 ABI3BP Target of Nesh-SH3 yes no 2 0.0015668 60.301 By MS/MS By matching 1 1 38747000 24245000 14502000 454 209 470 1020;1021 816 816 25 152;721 1 IYVDDGLISLQVK KVVEVGSKIYVDDGLI GLISLQVKQKGADFLV K I Y V K Q 0 0 0 2 0 1 0 1 0 2 2 1 0 0 0 1 0 0 1 2 0 0 13 0 1461.8079 B4DNK4;P14618;H3BQ34;H3BTN5 B4DNK4 100 112 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 0.010686 58.676 By matching By MS/MS 1 1 2787400 1300900 1486500 455 148 471 1022;1023 817 817 1 KAASPSPQSVR TPEPKKIKKAASPSPQ SPSPQSVRRVSSSRSV K K A V R R 2 1 0 0 0 1 0 0 0 0 0 1 0 0 2 3 0 0 0 1 0 0 11 1 1126.6095 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 744 754 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0067007 60.157 By MS/MS By MS/MS 2 2 3643400 1907100 1736300 456 133 472;473 1024;1025;1026;1027 818;819 818 103;104 2 KAASTDLGAGETVVGK NRGRRQAKKAASTDLG AGETVVGKVLEITELP K K A G K V 3 0 0 1 0 0 1 3 0 0 1 2 0 0 0 1 2 0 0 2 0 0 16 1 1502.794 H7C207;Q15032 H7C207 694 709 R3HDM1 R3H domain-containing protein 1 yes no 2 0.0063705 50.188 By MS/MS By matching 1 1 1151200 607140 544020 457 396 474 1028;1029 820 820 310 1 KADIVFLLDGSINFR PPSRPEKKKADIVFLL LDGSINFRRDSFQEVL K K A F R R 1 1 1 2 0 0 0 1 0 2 2 1 0 2 0 1 0 0 0 1 0 0 15 1 1706.9356 E7ENL6;P12111 E7ENL6 1030 1044 COL6A3 Collagen alpha-3(VI) chain yes no 3 2.4297E-15 118.2 By MS/MS By MS/MS 1 1 6234700 2128800 4105800 458 227 475 1030;1031 821;822 822 2 KAEDSDSEPEPEDNVR SPLGGIKRKAEDSDSE PEPEDNVRLWEAGWKQ R K A V R L 1 1 1 3 0 0 4 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 16 1 1815.7759 Q9H0D6 Q9H0D6 495 510 XRN2 5-3 exoribonuclease 2 yes yes 2;3 0.0016331 56.793 By MS/MS By MS/MS 1 2 3774100 2017100 1757000 459 744 476;477 1032;1033;1034 823;824;825 825 595;596 3 KAEGEPQEESPLK GSQEKQTKKAEGEPQE PQEESPLKSKSQEEPK K K A L K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 13 1 1440.7096 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 E9PQN2 166 178 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0019245 77.372 By MS/MS By MS/MS 1 1 4697800 2175400 2522400 460 264 478 1035;1036 826;827 826 204 2 KAEGEPQEESPLKSK GSQEKQTKKAEGEPQE EESPLKSKSQEEPKDT K K A S K S 1 0 0 0 0 1 4 1 0 0 1 3 0 0 2 2 0 0 0 0 0 0 15 2 1655.8366 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7 E9PQN2 166 180 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0012603 88.282 By MS/MS By MS/MS 1 1 9504800 6671700 2833200 461 264 479 1037;1038 828;829;830 830 204 3 KAEPSEVDMNSPK PKAKQVKKKAEPSEVD EVDMNSPKSKKAKKKE K K A P K S 1 0 1 1 0 0 2 0 0 0 0 2 1 0 2 2 0 0 0 1 0 0 13 1 1430.6711 Q9NR30 Q9NR30 61 73 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.0073733 53.754 By MS/MS By matching 1 1 1162700 495480 667240 462 758 480 1039;1040 831;832 832 615 2 KALEKQNSAYNMHSILSNTSAE KLEELKLKKALEKQNS ILSNTSAE________ K K A A E - 3 0 3 0 0 1 2 0 1 1 2 2 1 0 0 4 1 0 1 0 0 0 22 2 2435.1751 Q15172 Q15172 465 486 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform yes yes 3 0.01382 43.598 By matching By MS/MS 1 1 853580 405590 447990 463 625 481 1041;1042 833 833 0 KAQLMQYLSLPK AKLDLKAKKAQLMQYL MQYLSLPKTPKMLKMS K K A P K T 1 0 0 0 0 2 0 0 0 0 3 2 1 0 1 1 0 0 1 0 0 0 12 1 1418.7956 Q6IC83 Q6IC83 57 68 C22orf42 Uncharacterized protein C22orf42 yes yes 2 0.010589 44.616 By matching By MS/MS 1 1 1067900 698870 369000 464 656 482 1043;1044 834 834 512;942 1 KASGSENEGDYNPGR KGRGAKKRKASGSENE EGDYNPGRKTSKTTSK R K A G R K 1 1 2 1 0 0 2 3 0 0 0 1 0 0 1 2 0 0 1 0 0 0 15 1 1579.6863 Q02880 Q02880 1548 1562 TOP2B DNA topoisomerase 2-beta yes yes 2 0.0045487 55.258 By MS/MS By matching 1 1 702590 354970 347620 465 591 483 1045;1046 835 835 454 1 KAVVLPGGTATSPK LMAASVARKAVVLPGG GGTATSPKMIAKNVLG R K A P K M 2 0 0 0 0 0 0 2 0 0 1 2 0 0 2 1 2 0 0 2 0 0 14 1 1324.7715 H0Y5I5;F8WCX2;Q8N1G0 H0Y5I5 25 38 ZNF687 Zinc finger protein 687 yes no 2 0.0042286 73.666 By matching By MS/MS 1 1 934190 558090 376100 466 314 484 1047;1048 836 836 253;746;747 1 KDLYANTVLSGGTTMYPGIADR MKCDVDIRKDLYANTV MYPGIADRMQKEITAL R K D D R M 2 1 1 2 0 0 0 3 0 1 2 1 1 0 1 1 3 0 2 1 0 0 22 1 2342.1576 P63261;P60709 P63261 291 312 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 3 0.0085733 60.939 By MS/MS By matching 1 1 1180100 401040 779010 467 576 485 1049;1050 837 837 73 1 KDSGEYTFEVQNDVGR LKIISTEKKDSGEYTF EVQNDVGRSSCKARIN K K D G R S 0 1 1 2 0 1 2 2 0 0 0 1 0 1 0 1 1 0 1 2 0 0 16 1 1842.8384 A0A0A0MTS7;Q8WZ42 A0A0A0MTS7 5888 5903 TTN Titin yes no 3 0.013946 20.389 By MS/MS 1 0 0 0 468 70 486 1051 838 838 1 KDSLTQAQEQGNLLN MGVHHLHRKDSLTQAQ QEQGNLLN________ R K D L N - 1 0 2 1 0 3 1 1 0 0 3 1 0 0 0 1 1 0 0 0 0 0 15 1 1657.8271 Q5JTD0 Q5JTD0 543 557 TJAP1 Tight junction-associated protein 1 yes yes 2 0.00091089 65.231 By MS/MS By MS/MS 1 1 2398900 1327300 1071600 469 641 487 1052;1053 839;840 840 496 2 KEDLVFIFWAPESAPLK TYETKESKKEDLVFIF APESAPLKSKMIYASS K K E L K S 2 0 0 1 0 0 2 0 0 1 2 2 0 2 2 1 0 1 0 1 0 0 17 1 1989.0612 E9PQB7;G3V1A4;E9PP50;E9PK25;P23528;Q9Y281 E9PQB7 79 95 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 3 3.7277E-21 105.5 By MS/MS By MS/MS 1 1 11670000 0 11670000 470 263 488 1054;1055 841;842 842 2 KETESEAEDNLDDLEK PVAAPEPKKETESEAE DNLDDLEKHLREKALR K K E E K H 1 0 1 3 0 0 5 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 16 1 1863.8222 A9Z1X7;Q8IYB3 A9Z1X7 879 894 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.0003713 69.255 By MS/MS By MS/MS 1 1 2549900 1051400 1498600 471 133 489 1056;1057 843;844 843 105 2 KETPPPLVPPAAR ________________ PLVPPAAREWNLPPNA R K E A R E 2 1 0 0 0 0 1 0 0 0 1 1 0 0 5 0 1 0 0 1 0 0 13 1 1371.7874 Q9BQA1 Q9BQA1 3 15 WDR77 Methylosome protein 50 yes yes 3 0.0064923 56.872 By matching By MS/MS 1 1 1061700 523560 538180 472 732 490 1058;1059 845 845 842 1 KETQSPEQVK NSERITVKKETQSPEQ TQSPEQVKSEKLKDLF K K E V K S 0 0 0 0 0 2 2 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 1 1172.6037 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 490 499 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0016494 89.356 By matching By MS/MS 1 1 6351400 3208200 3143300 473 264 491 1060;1061 846 846 202 1 KEVSPEVVR KREEIIIKKEVSPEVV EVSPEVVRSKLSPSPS K K E V R S 0 1 0 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 9 1 1041.5819 Q5T200;A0A087WX14 Q5T200 195 203 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.0086842 70.685 By matching By MS/MS 1 1 1336900 667700 669240 474 646 492 1062;1063 847 847 501 1 KFPELVLDKPLDR TRNRSEGRKFPELVLD VLDKPLDREEQPQLRL R K F D R E 0 1 0 2 0 0 1 0 0 0 3 2 0 1 2 0 0 0 0 1 0 0 13 2 1568.8926 A0A096LNH7;Q9Y5E3 A0A096LNH7 53 65 PCDHB6 Protocadherin beta-6 yes no 2 0.0083106 45.158 By matching By MS/MS 1 1 523230 303010 220220 475 52 493 1064;1065 848 848 1 KFQEQECPPSPEPTR HELVRVIRKFQEQECP PPSPEPTRKEKDKKGC R K F T R K 0 1 0 0 1 2 3 0 0 0 0 1 0 1 4 1 1 0 0 0 0 0 15 1 1828.8414 P62070 P62070 177 191 RRAS2 Ras-related protein R-Ras2 yes yes 3 0.0059996 43.955 By MS/MS By matching 1 1 1160900 447620 713300 476 577 494 1066;1067 849 849 448 1 KGAGDGSDEEVDGK VVPRRMARKGAGDGSD SDEEVDGKADGAEAKP R K G G K A 1 0 0 3 0 0 2 4 0 0 0 2 0 0 0 1 0 0 0 1 0 0 14 1 1362.5899 P35579 P35579 1937 1950 MYH9 Myosin-9 yes yes 2 0.00051701 84.62 By MS/MS By MS/MS 2 2 2275500 1076700 1198700 477 551 495 1068;1069;1070;1071 850;851;852 852 422 3 KGMLVKQSNVEDSPEK VPAKPARRKGMLVKQS NVEDSPEKTCSIPIPT R K G E K T 0 0 1 1 0 1 2 1 0 0 1 3 1 0 1 2 0 0 0 2 0 0 16 2 1787.9087 H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;Q9UPX8 H7C1X5 289 304 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 yes no 3 0.010638 44.457 By MS/MS 1 0 0 0 478 64 496 1072 853 853 134 11 45;46 1 KGNSPNSEPPTPK RPPEADGKKGNSPNSE NSEPPTPKTAWAETSR K K G P K T 0 0 2 0 0 0 1 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 13 1 1351.6732 P48634 P48634 377 389 PRRC2A Protein PRRC2A yes yes 2 0.0077794 53.211 By MS/MS By matching 1 1 594140 335800 258340 479 560 497 1073;1074 854 854 430 1 KGSSGNASEVSVACLTER IPSIERSRKGSSGNAS SVACLTERIHQMEENQ R K G E R I 2 1 1 0 1 0 2 2 0 0 1 1 0 0 0 4 1 0 0 2 0 0 18 1 1850.8792 C9J8U1;F8WAN1;Q69YQ0 C9J8U1 382 399 SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 3 0.0032094 50.831 By MS/MS By matching 1 1 707570 393880 313690 480 180 498 1075;1076 855 855 135;136 1 KISQRVIHLFDEK TAFSNVGRKISQRVIH VIHLFDEKGNDLGNMH R K I E K G 0 1 0 1 0 1 1 0 1 2 1 2 0 1 0 1 0 0 0 1 0 0 13 2 1611.9097 Q9H2K0 Q9H2K0 81 93 MTIF3 Translation initiation factor IF-3, mitochondrial yes yes 2 0.0071305 54.539 By MS/MS 1 4414100 0 4414100 481 748 499 1077 856 856 240 1 KITIADCGQLE SRNGKTSKKITIADCG IADCGQLE________ K K I L E - 1 0 0 1 1 1 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1246.6227 P62937 P62937 155 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.001725 89.047 By matching By MS/MS 1 1 1969100 907850 1061200 482 581 500 1078;1079 857 857 1 KITSVSQVPR KIWEGIARKITSVSQV TSVSQVPRSVKDIKHR R K I P R S 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 2 1 0 0 2 0 0 10 1 1113.6506 H3BSZ2 H3BSZ2 205 214 PRDM11 yes yes 2 0.0064904 65.5 By MS/MS By matching 1 1 795030 704120 90914 483 384 501 1080;1081 858 858 184 299;300 1 KLEKEEEEGISQESSEEEQ RKPRGRPKKLEKEEEE QESSEEEQ________ K K L E Q - 0 0 0 0 0 2 9 1 0 1 1 2 0 0 0 3 0 0 0 0 0 0 19 2 2235.9867 P17096 P17096 89 107 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2;3 1.8631E-06 89.468 By MS/MS By MS/MS 1 2 17434000 6320100 11114000 484 527 502 1082;1083;1084 859;860;861 861 408;409 3 KLGDMRNSATFK TVGSAISRKLGDMRNS MRNSATFKSFEDRVGT R K L F K S 1 1 1 1 0 0 0 1 0 0 1 2 1 1 0 1 1 0 0 0 0 0 12 2 1366.7027 O43399 O43399 154 165 TPD52L2 Tumor protein D54 yes yes 2 0.0064426 54.982 By MS/MS By matching 1 1 1319400 489440 829960 485 447 503 1085;1086 862 862 60 50 359 1 KLMFKTEGPDSD GQSTSRHKKLMFKTEG KTEGPDSD________ K K L S D - 0 0 0 2 0 0 1 1 0 0 1 2 1 1 1 1 1 0 0 0 0 0 12 2 1366.6439 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 223 234 TP53 Cellular tumor antigen p53 yes no 2 1.3093E-05 113.54 By MS/MS By matching 2 2 3867700 2386600 1481100 486 38 504;505 1087;1088;1089;1090 863;864 864 8 21 2 KLSGDQPAAR KGWESRKRKLSGDQPA SGDQPAARTPRSKKKK R K L A R T 2 1 0 1 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 1 1041.5567 J3KQ96;E7ETY2;Q13428 J3KQ96 1310 1319 TCOF1 Treacle protein yes no 2 0.0017703 89.663 By MS/MS By MS/MS 1 1 9535400 4577900 4957500 487 238 506 1091;1092 865;866;867;868;869 869 179 5 KLSPIIEDSR YSQTLSIKKLSPIIED SPIIEDSREATHSSGF K K L S R E 0 1 0 1 0 0 1 0 0 2 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1156.6452 O60566 O60566 668 677 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 2 0.013275 54.898 By MS/MS By matching 1 1 552200 238470 313730 488 453 507 1093;1094 870 870 366 1 KLSSSDAPAQDTGSSAAAVETDASR KVAGKVTRKLSSSDAP AVETDASRTGAQQKMR R K L S R T 6 1 0 3 0 1 1 1 0 0 1 1 0 0 1 6 2 0 0 1 0 0 25 1 2421.1256 H0YIM6;H0YHT2;A0A1B0GV47;Q7Z4S6 H0YIM6 109 133 KIF21A Kinesin-like protein KIF21A yes no 3 4.714E-18 95.319 By MS/MS By MS/MS 1 1 4983600 2272600 2711000 489 108 508 1095;1096 871;872 872 73;74;75 2 KLSVPTSDEEDEVPAPKPR ________________ EVPAPKPRGGKKTKGG K K L P R G 1 1 0 2 0 0 3 0 0 0 1 2 0 0 4 2 1 0 0 2 0 0 19 2 2093.0641 F5GYK6;Q5STZ8;Q8NE71 F5GYK6 6 24 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 0.00096524 68.369 By MS/MS 1 1215800 1215800 0 490 285 509 1097 873 873 228;738 1 KLVSQKSSDPTGR LSKPSPQKKLVSQKSS KSSDPTGRNHGENSQE K K L G R N 0 1 0 1 0 1 0 1 0 0 1 2 0 0 1 3 1 0 0 1 0 0 13 2 1401.7576 G3XAE9;Q9Y4F4 G3XAE9 867 879 FAM179B Protein FAM179B yes no 2 0.0056188 52.579 By matching By MS/MS 1 1 740910 293680 447220 491 328 510 1098;1099 874 874 265;266 1 KMSYDWSQFNTLYLRVR IPRGAFERKMSYDWSQ NTLYLRVRGDGRPWMV R K M V R G 0 2 1 1 0 1 0 0 0 0 2 1 1 1 0 2 1 1 2 1 0 0 17 2 2206.0993 H0YL22;Q9Y375 H0YL22 197 213 NDUFAF1 Complex I intermediate-associated protein 30, mitochondrial yes no 3 0.0071396 42.242 By MS/MS 1 1004300 0 1004300 492 369 511 1100 875 875 49 903 1 KNIMETFKPDPNSSSFK MLLDQSGKKNIMETFK DPNSSSFKRPDGEMNI K K N F K R 0 0 2 1 0 0 1 0 0 1 0 3 1 2 2 3 1 0 0 0 0 0 17 2 1968.9615 O00463 O00463 493 509 TRAF5 TNF receptor-associated factor 5 yes yes 3 0.0095165 47.545 By MS/MS 1 0 0 0 493 436 512 1101 876 876 57 46 346;347;348 1 KNNSTTTNNSK KPIPRIKRKNNSTTTN STTTNNSKPSSLPTLG R K N S K P 0 0 4 0 0 0 0 0 0 0 0 2 0 0 0 2 3 0 0 0 0 0 11 1 1207.5793 Q8NFU7 Q8NFU7 1784 1794 TET1 Methylcytosine dioxygenase TET1 yes yes 2 0.011545 59.116 By matching By MS/MS 1 1 1171300 648640 522620 494 699 513 1102;1103 877 877 99 551 1 KNVKQHADQTVNEDSEGR QCKSKRLRKNVKQHAD VNEDSEGRDLRQVTST R K N G R D 1 1 2 2 0 2 2 1 1 0 0 2 0 0 0 1 1 0 0 2 0 0 18 2 2053.9777 G8JLB0;Q96RI1 G8JLB0 210 227 NR1H4 Bile acid receptor yes no 2 0.012892 41.218 By MS/MS 1 0 0 0 495 333 514 1104 878 878 42;43;179 1 KPAQEETEETSSQESAEED WPQQVVQKKPAQEETE SQESAEED________ K K P E D - 2 0 0 1 0 2 7 0 0 0 0 1 0 0 1 3 2 0 0 0 0 0 19 1 2122.8662 P52926 P52926 91 109 HMGA2 High mobility group protein HMGI-C yes yes 2 0.014199 40.798 By MS/MS 1 0 0 0 496 570 515 1105 879 879 438;439 1 KPLVIIAEDVDGEALSTLVLNR LEIANAHRKPLVIIAE LSTLVLNRLKVGLQVV R K P N R L 2 1 1 2 0 0 2 1 0 2 4 1 0 0 1 1 1 0 0 3 0 0 22 1 2364.3264 P10809 P10809 269 290 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 7.1242E-18 84.573 By MS/MS By MS/MS 1 1 12472000 0 12472000 497 516 516 1106;1107 880;881 880 2 KPSLSYHQRFGR ECEKSFSRKPSLSYHQ SYHQRFGRPRWVDHKD R K P G R P 0 2 0 0 0 1 0 1 1 0 1 1 0 1 1 2 0 0 1 0 0 0 12 2 1474.7793 E7ETH6 E7ETH6 366 377 ZNF587B Zinc finger protein 587B yes yes 2 0.011172 45.598 By matching By MS/MS 1 1 636890 393020 243870 498 237 517 1108;1109 882 882 175;887 1 KPVTVSPTTPTSPTEGEAS AELDRITRKPVTVSPT SPTEGEAS________ R K P A S - 1 0 0 0 0 0 2 1 0 0 0 1 0 0 4 3 5 0 0 2 0 0 19 1 1884.9317 E9PHI6;Q9Y6G9 E9PHI6 389 407 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 0.00059947 72.089 By matching By MS/MS 1 1 15902000 9018600 6883900 499 255 518 1110;1111 883 883 733 1 KQEGTPEGLYL SKENVLYKKQEGTPEG GTPEGLYL________ K K Q Y L - 0 0 0 0 0 1 2 2 0 0 2 1 0 0 1 0 1 0 1 0 0 0 11 1 1233.6241 P62191 P62191 430 440 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.010944 56.916 By matching By MS/MS 1 1 427450 240800 186650 500 578 519 1112;1113 884 884 930 1 KQQQEPTGEPSPK KRGRGRPRKQQQEPTG PTGEPSPKRPRGRPKG R K Q P K R 0 0 0 0 0 3 2 1 0 0 0 2 0 0 3 1 1 0 0 0 0 0 13 1 1452.7209 P52926;F5H2U8;F5H2A4;F5H6H0 P52926 34 46 HMGA2 High mobility group protein HMGI-C yes no 2;3 0.00023245 84.352 By MS/MS By MS/MS 2 3 4620600 2522000 2098700 501 570 520 1114;1115;1116;1117;1118 885;886;887;888;889;890;891 890 440;803 7 KRETDDEGEDD EGGKGEKRKRETDDEG TDDEGEDD________ R K R D D - 0 1 0 4 0 0 3 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 11 2 1307.5113 Q92688 Q92688 241 251 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes yes 2 0.013188 50.95 By matching By MS/MS 1 1 1785200 811620 973630 502 710 521 1119;1120 892 892 836 1 KRGSSASALR LCNGPRPKKRGSSASA GSSASALRPGLRTTIL K K R L R P 2 2 0 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 0 0 0 0 10 2 1031.5836 Q8N2G4 Q8N2G4 113 122 LYPD1 Ly6/PLAUR domain-containing protein 1 yes yes 2 0.0093629 59.35 By MS/MS By matching 1 1 8955600 4072600 4883000 503 688 522 1121;1122 893 893 1 KRQSPEPSPVTLGR SESKRRCRKRQSPEPS PSPVTLGRRSSGRQGG R K R G R R 0 2 0 0 0 1 1 1 0 0 1 1 0 0 3 2 1 0 0 1 0 0 14 2 1550.8529 Q9NRL2 Q9NRL2 1410 1423 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 3 0.0037601 65.043 By MS/MS 1 415660 0 415660 504 760 523 1123 894 894 617 1 KRSEGFSMDR PVKVERTRKRSEGFSM SEGFSMDRKVEKKKEP R K R D R K 0 2 0 1 0 0 1 1 0 0 0 1 1 1 0 2 0 0 0 0 0 0 10 2 1211.5717 K7ERA4;Q7Z4V5 K7ERA4 34 43 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 3 0.0082407 50.354 By MS/MS By matching 1 1 821980 421980 400000 505 427 524 1124;1125 895 895 44 334 1 KSHVYSCRFSR GFFRRSIRKSHVYSCR VYSCRFSRQCVVDKDK R K S S R Q 0 2 0 0 1 0 0 0 1 0 0 1 0 1 0 3 0 0 1 1 0 0 11 2 1425.6936 Q14541 Q14541 42 52 HNF4G Hepatocyte nuclear factor 4-gamma yes yes 2 0.013444 42.976 By MS/MS 1 193740 0 193740 506 617 525 1126 896 896 476;934 1 KSMIPSFMTMDQSRK WHDKYTLRKSMIPSFM MTMDQSRKVLLIGKSI R K S R K V 0 1 0 1 0 1 0 0 0 1 0 2 3 1 1 3 1 0 0 0 0 0 15 2 1785.8576 Q96CW5 Q96CW5 468 482 TUBGCP3 Gamma-tubulin complex component 3 yes yes 3 0.011332 40.179 By MS/MS 1 0 0 0 507 715 526 1127 897 897 232 90;91;92 568;837 1 KSQENLGNPSKNEDNVK HPLKNEERKSQENLGN SKNEDNVKSAPPQSRL R K S V K S 0 0 4 1 0 1 2 1 0 0 1 3 0 0 1 2 0 0 0 1 0 0 17 2 1899.9286 C9J1M4;C9J8V3;C9JJN3;C9JR71;C9JTF7;C9JP72;C9J3Y6;C9IYB9;C9K0C5;B4DGG1;Q9H0X4 C9J1M4 20 36 ITFG3 Protein ITFG3 yes no 2 0.0042212 59.198 By MS/MS 1 22025000 0 22025000 508 146 527 1128 898 898 17 117 1 KSSADTEFSDECTTAER SWRSNNSRKSSADTEF DECTTAERVLMKSPSP R K S E R V 2 1 0 2 1 0 3 0 0 0 0 1 0 1 0 3 3 0 0 0 0 0 17 1 1932.8007 Q9H6S0 Q9H6S0 1200 1216 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 3 0.003844 47.155 By matching By MS/MS 1 1 2564100 1057200 1506900 509 754 528 1129;1130 899 899 611;850 0 KSSPSKSGAMNQSSSQK NKVSKSRKKSSPSKSG MNQSSSQKNTRKKSLK K K S Q K N 1 0 1 0 0 2 0 1 0 0 0 3 1 0 1 7 0 0 0 0 0 0 17 2 1737.8316 Q5QGS0 Q5QGS0 1178 1194 KIAA2022 Protein KIAA2022 yes yes 2 0.0099176 44.829 By MS/MS 1 0 0 0 510 643 529 1131 900 900 89;219 497;498;499;500 1 KSVYGLQNDIR MRNPHKTRKSVYGLQN YGLQNDIRSHSPTHTP R K S I R S 0 1 1 1 0 1 0 1 0 1 1 1 0 0 0 1 0 0 1 1 0 0 11 1 1291.6884 Q5T3H5;P49802 Q5T3H5 59 69 RGS7 Regulator of G-protein signaling 7 yes no 2 0.0096057 47.96 By matching By MS/MS 1 1 1890500 776050 1114400 511 563 530 1132;1133 901 901 433;928 1 KTGSYGALAEITASK ATWRLGLRKTGSYGAL LAEITASKEGQKEKDT R K T S K E 3 0 0 0 0 0 1 2 0 1 1 2 0 0 0 2 2 0 1 0 0 0 15 1 1495.7882 H0YIS4;H0YHI8;F8VZN8;O14974 H0YIS4 137 151 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2;3 0.0027743 62.088 By MS/MS By MS/MS 1 2 2694600 1285500 1409100 512 309 531 1134;1135;1136 902;903 902 745;896 2 KTVQSSSNQVLLK VFTRSMAKKTVQSSSN SSNQVLLKFHRDAATG K K T L K F 0 0 1 0 0 2 0 0 0 0 2 2 0 0 0 3 1 0 0 2 0 0 13 1 1430.8093 Q5T6B5;A0A087X0K4;Q7Z408 Q5T6B5 356 368 CSMD2 CUB and sushi domain-containing protein 2 yes no 2 0.010322 45.997 By MS/MS 1 0 0 0 513 41 532 1137 904 904 122 25;26;678 1 KVEEEQEADEEDVSEEEAESK SESAQPLKKVEEEQEA SEEEAESKEGTNKDFP K K V S K E 2 0 0 2 0 1 10 0 0 0 0 2 0 0 0 2 0 0 0 2 0 0 21 1 2437.014 Q9H3N1 Q9H3N1 234 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 3 1.7733E-09 88.394 By MS/MS By MS/MS 1 1 32800000 15831000 16969000 514 750 533 1138;1139 905;906 905 605 2 KVESLQEEIAFLK LARLDLERKVESLQEE QEEIAFLKKLHEEEIQ R K V L K K 1 0 0 0 0 1 3 0 0 1 2 2 0 1 0 1 0 0 0 1 0 0 13 1 1532.845 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 223 235 VIM Vimentin yes no 3 0.0083282 35.763 By MS/MS 1 0 0 0 515 507 534 1140 907 907 1 KVMDSDEDDDY TTVKFNRRKVMDSDED DSDEDDDY________ R K V D Y - 0 0 0 5 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 11 1 1330.4871 K7EQA1;O14737 K7EQA1 77 87 PDCD5 Programmed cell death protein 5 yes no 2 3.2732E-24 142.12 By MS/MS By MS/MS 2 2 10305000 5194000 5110600 516 425 535;536 1141;1142;1143;1144 908;909;910;911;912 911 43 333 5 KVPQVSTPTLVEVSR ALLVRYTKKVPQVSTP PTLVEVSRNLGKVGSK K K V S R N 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 2 0 0 4 0 0 15 1 1638.9305 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;C9JKR2;A0A087WWT3;CON__P02769 A0A0C4DGB6 438 452 ALB Serum albumin no no 3 0.00045154 78.191 By MS/MS By MS/MS 1 1 1666800 907920 758890 + 517 77;201 537 1145;1146 913;914 914 2 KVVDYSQFQESDDADEDYGR MSRPVRNRKVVDYSQF DADEDYGRDSGPPTKK R K V G R D 1 1 0 5 0 2 2 1 0 0 0 1 0 1 0 2 0 0 2 2 0 0 20 1 2364.9982 Q9H1E3 Q9H1E3 9 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 9.7125E-30 116.92 By MS/MS By matching 1 1 46061000 45658000 403280 518 745 538 1147;1148 915 915 599;600 1 KVVDYSQFQESDDADEDYGRDSGPPTK MSRPVRNRKVVDYSQF RDSGPPTKKIRSSPRE R K V T K K 1 1 0 6 0 2 2 2 0 0 0 2 0 1 2 3 1 0 2 2 0 0 27 2 3047.3268 Q9H1E3 Q9H1E3 9 35 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 4 0.0026212 44.712 By MS/MS By matching 1 1 1596500 1354000 242580 519 745 539 1149;1150 916 916 599;600 1 KVVVSPTK KAAATSAKKVVVSPTK KVVVSPTKKVAVATPA K K V T K K 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 70 NCL Nucleolin yes no 2 2.5934E-33 152.69 By MS/MS By MS/MS 1 1 16153000 7640900 8511700 520 532 540 1151;1152 917;918;919;920 919 411 4 KVVVSPTKK KAAATSAKKVVVSPTK VVVSPTKKVAVATPAK K K V K K V 0 0 0 0 0 0 0 0 0 0 0 3 0 0 1 1 1 0 0 3 0 0 9 2 984.63317 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 71 NCL Nucleolin yes no 2;3 6.2533E-10 134.38 By MS/MS By MS/MS 2 2 83208000 41241000 41967000 521 532 541 1153;1154;1155;1156 921;922 922 411 2 KWDGSEEDEDNSK GKAQKSNKKWDGSEED EEDEDNSKKIKERSRI K K W S K K 0 0 1 3 0 0 3 1 0 0 0 2 0 0 0 2 0 1 0 0 0 0 13 1 1537.6169 A0A087WUT6;O60841 A0A087WUT6 160 172 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.010682 49.333 By MS/MS By matching 1 1 937560 498750 438810 522 20 542 1157;1158 923 923 7 1 KYHIDLDPHFNDILGQHSR EELYGYLKKYHIDLDP DILGQHSRKRWENFIH K K Y S R K 0 1 1 3 0 1 0 1 3 2 2 1 0 1 1 1 0 0 1 0 0 0 19 1 2304.14 H3BV19;H3BSA1;P19784 H3BV19 63 81 CSNK2A2 Casein kinase II subunit alpha yes no 3 0.014537 16.228 By MS/MS 1 0 0 0 523 383 543 1159 924 924 1 LAAAEETAVSPR RVWSLERRLAAAEETA EETAVSPRKSPRPAGP R L A P R K 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1213.6303 Q9BUH6 Q9BUH6 139 150 C9orf142 Protein PAXX yes yes 2 2.604E-24 141.82 By MS/MS By MS/MS 1 1 5747900 2715100 3032800 524 736 544 1160;1161 925;926 926 590;843 2 LAAPSVSHVSPR QTSERANKLAAPSVSH SVSHVSPRKNPSVVIK K L A P R K 2 1 0 0 0 0 0 0 1 0 1 0 0 0 2 3 0 0 0 2 0 0 12 0 1219.6673 A0A0U1RRM7;A0A0U1RQW3;Q8WXE1 A0A0U1RRM7 122 133 ATRIP ATR-interacting protein yes no 2 0.0073677 68.847 By MS/MS By matching 1 1 1150600 569330 581240 525 97 545 1162;1163 927 927 68 1 LAEQFVLLNLVYETTDK AENKEIQKLAEQFVLL LVYETTDKHLSPDGQY K L A D K H 1 0 1 1 0 1 2 0 0 0 4 1 0 1 0 0 2 0 1 2 0 0 17 0 1995.0565 H7C3Z9;C9J3E2;B5MC07;O95994 H7C3Z9 30 46 AGR2 Anterior gradient protein 2 homolog yes no 2;3 1.4303E-89 154.52 By MS/MS By MS/MS 2 2 40153000 15814000 24339000 526 154 546 1164;1165;1166;1167 928;929;930;931 929 4 LAKCSEITFHTTK KLKNAGRRLAKCSEIT EITFHTTKTLPMQIDG R L A T K T 1 0 0 0 1 0 1 0 1 1 1 2 0 1 0 1 3 0 0 0 0 0 13 1 1534.7814 P23743 P23743 679 691 DGKA Diacylglycerol kinase alpha yes yes 3 0.0066612 50.207 By MS/MS 1 278110 0 278110 527 541 547 1168 932 932 414;796 1 LAPVPSPEPQKPAPVSPESVK VPVCESQKLAPVPSPE PVSPESVKATLSNPKP K L A V K A 2 0 0 0 0 1 2 0 0 0 1 2 0 0 7 3 0 0 0 3 0 0 21 1 2153.1732 Q96JM3 Q96JM3 199 219 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.00083391 61.167 By MS/MS By MS/MS 1 1 2682900 1330600 1352300 528 721 548 1169;1170 933;934 934 575;576;577 2 LATVGELQAAWR ECENQDARLATVGELQ GELQAAWRNGFDQCDY R L A W R N 3 1 0 0 0 1 1 1 0 0 2 0 0 0 0 0 1 1 0 1 0 0 12 0 1313.7092 Q86W61;D6RGZ6;E9PF17;P13611 Q86W61 277 288 VCAN Versican core protein yes no 2 0.013077 58.433 By matching By MS/MS 1 1 502860 256650 246210 529 219 549 1171;1172 935 935 1 LCYVALDFEQEMATAASSSSLEK IVRDIKEKLCYVALDF ASSSSLEKSYELPDGQ K L C E K S 4 0 0 1 1 1 3 0 0 0 3 1 1 1 0 4 1 0 1 1 0 0 23 0 2549.1666 P63261;P60709;I3L4N8;Q6S8J3 P63261 216 238 ACTG1;ACTB;POTEE Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E yes no 3 1.2382E-08 78.324 By MS/MS 1 6791300 0 6791300 530 576 550 1173 936 936 1 LDFTGNLIEDIEDGTFSK ADIPNLRRLDFTGNLI IEDGTFSKLSLLEELS R L D S K L 0 0 1 3 0 0 2 2 0 2 2 1 0 2 0 1 2 0 0 0 0 0 18 0 2012.9579 P20774;Q5TBF5 P20774 148 165 OGN Mimecan yes no 2 0.0019199 67.358 By matching By MS/MS 1 1 3129800 1957100 1172800 531 536 551 1174;1175 937 937 1 LDGENIYIR AWKKKRERLDGENIYI DGENIYIRHSNLMLED R L D I R H 0 1 1 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 9 0 1091.5611 Q4VB86;P11171 Q4VB86 412 420 EPB41 Protein 4.1 yes no 2 0.00013012 127.56 By MS/MS By MS/MS 1 1 2883100 1389600 1493400 532 518 552 1176;1177 938;939 938 922 2 LDNLVAILDINR MAFASIYKLDNLVAIL VAILDINRLGQSDPAP K L D N R L 1 1 2 2 0 0 0 0 0 2 3 0 0 0 0 0 0 0 0 1 0 0 12 0 1367.7773 A0A0B4J1R6;P29401;E9PFF2 A0A0B4J1R6 9 20 TKT Transketolase yes no 2 0.0058132 67.385 By MS/MS By matching 1 1 2424900 840570 1584400 533 72 553 1178;1179 940 940 1 LDSSPSVSSTLAAK QASKATPKLDSSPSVS VSSTLAAKDDPDGKQE K L D A K D 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 1 0 0 14 0 1361.7038 J3KQ96;E7ETY2;Q13428 J3KQ96 1187 1200 TCOF1 Treacle protein yes no 2 0.0019391 90.759 By MS/MS By matching 1 1 2039600 792820 1246700 534 238 554 1180;1181 941 941 180 1 LEASTSDPLPAR PGSNRKLRLEASTSDP TSDPLPARGGSALPGS R L E A R G 2 1 0 1 0 0 1 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 12 0 1255.6408 A5PKW4 A5PKW4 151 162 PSD PH and SEC7 domain-containing protein 1 yes yes 2 0.0096374 66.962 By matching By MS/MS 1 1 1999000 960090 1038900 535 122 555 1182;1183 942 942 88;89;699 1 LEELENLVSSLR DVKELLSRLEELENLV ENLVSSLREQCTAGAG R L E L R E 0 1 1 0 0 0 3 0 0 0 4 0 0 0 0 2 0 0 0 1 0 0 12 0 1400.7511 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 126 137 TNC Tenascin yes no 2 0.0021718 82.261 By MS/MS 1 640090 0 640090 536 246 556 1184 943 943 1 LEEPPELNRQSPNPR LVPNGFSKLEEPPELN NRQSPNPRRGHAVPPT K L E P R R 0 2 2 0 0 1 3 0 0 0 2 0 0 0 4 1 0 0 0 0 0 0 15 1 1774.8962 Q7Z5L9 Q7Z5L9 165 179 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.0017818 62.891 By MS/MS By matching 1 1 4845500 2103000 2742500 537 678 557 1185;1186 944 944 527 1 LEGDSTDLSDQIAELQAQIAELKMQLAK ELEKTRRKLEGDSTDL ELKMQLAKKEEELQAA K L E A K K 4 0 0 3 0 4 3 1 0 2 5 2 1 0 0 2 1 0 0 0 0 0 28 1 3057.554 P35579 P35579 1053 1080 MYH9 Myosin-9 yes yes 3 0.013789 22.979 By MS/MS 1 1112300 1112300 0 538 551 558 1187 945 945 0 LEGLTDEINFLR NKVELESRLEGLTDEI TDEINFLRQLYEKEIR R L E L R Q 0 1 1 1 0 0 2 1 0 1 3 0 0 1 0 0 1 0 0 0 0 0 12 0 1418.7405 CON__H-INV:HIT000292931;CON__P05787;P05787;F8VP67;F8VUG2;F8W1U3 CON__H-INV:HIT000292931 174 185 KRT8 Keratin, type II cytoskeletal 8 yes no 2 0.0054941 74.944 By MS/MS 1 605310 605310 0 + 539 197 559 1188 946 946 1 LEHLYLNNNSIEK SVPAINNRLEHLYLNN LNNNSIEKINGTQICP R L E E K I 0 0 3 0 0 0 2 0 1 1 3 1 0 0 0 1 0 0 1 0 0 0 13 0 1585.81 P51888 P51888 313 325 PRELP Prolargin yes yes 3 0.012068 39.424 By matching By MS/MS 1 1 617520 346650 270870 540 568 560 1189;1190 947 947 1 LEKLDIMIR YNDPIYVKLEKLDIMI EKLDIMIRLASQANIA K L E I R L 0 1 0 1 0 0 1 0 0 2 2 1 1 0 0 0 0 0 0 0 0 0 9 1 1129.6529 C9J1E7;A0A087WYD1;A0A087WU93;A0A087WZQ6;A0A087X253;P63010;Q10567 C9J1E7 336 344 AP1B1;AP2B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 yes no 2 0.0035888 88.942 By MS/MS By MS/MS 1 1 708810 311190 397620 541 18 561 1191;1192 948;949 949 2 2 LELLAAYEEVIR GVSFSGHRLELLAAYE AAYEEVIREESAADWA R L E I R E 2 1 0 0 0 0 3 0 0 1 3 0 0 0 0 0 0 0 1 1 0 0 12 0 1417.7817 D6RFI1;D6R9W4;Q16643 D6RFI1 11 22 DBN1 Drebrin yes no 2 7.6572E-06 104.22 By MS/MS 1 953190 0 953190 542 210 562 1193 950 950 1 LENLLLLDLQHNR IPPGVFSKLENLLLLD LLDLQHNRLSDGVFKP K L E N R L 0 1 2 1 0 1 1 0 1 0 6 0 0 0 0 0 0 0 0 0 0 0 13 0 1589.8889 P51888 P51888 194 206 PRELP Prolargin yes yes 3 1.0447E-09 112.64 By MS/MS By MS/MS 1 1 2600800 1356400 1244400 543 568 563 1194;1195 951;952 952 2 LESESTSPSLEMK SSEVSKPKLESESTSP TSPSLEMKIHNFLKGN K L E M K I 0 0 0 0 0 0 3 0 0 0 2 1 1 0 1 4 1 0 0 0 0 0 13 0 1436.6705 Q5VT52 Q5VT52 659 671 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 0.0087739 50.292 By MS/MS 1 0 0 0 544 649 564 1196 953 953 84 505 1 LFAVAPNQNLK RAREEGIRLFAVAPNQ VAPNQNLKEQGLRDIA R L F L K E 2 0 2 0 0 1 0 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 11 0 1213.6819 P12110 P12110 187 197 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.0063059 71.223 By MS/MS By matching 1 1 757010 366140 390870 545 520 565 1197;1198 954 954 1 LFIGGLSFETTDESLR KEPEQLRKLFIGGLSF ETTDESLRSHFEQWGT K L F L R S 0 1 0 1 0 0 2 2 0 1 3 0 0 2 0 2 2 0 0 0 0 0 16 0 1783.8992 F8VTQ5;F8W6I7;P09651;F8W646;F8VZ49;Q32P51 F8VTQ5 16 31 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 0.00011386 92.925 By MS/MS By matching 1 1 2808100 1317600 1490500 546 305 566 1199;1200 955 955 1 LFIGGLSFETTEESLR REKEQFRKLFIGGLSF ETTEESLRNYYEQWGK K L F L R N 0 1 0 0 0 0 3 2 0 1 3 0 0 2 0 2 2 0 0 0 0 0 16 0 1797.9149 A0A087WUI2;P22626 A0A087WUI2 23 38 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.00036649 88.552 By MS/MS By MS/MS 1 1 3684700 1271000 2413600 547 19 567 1201;1202 956;957 957 2 LFNEHLVSASSNPALALRR YYCGSQHRLFNEHLVS NPALALRRKKHTEKEV R L F R R K 3 2 2 0 0 0 1 0 1 0 4 0 0 1 1 3 0 0 0 1 0 0 19 1 2094.1334 Q5T011 Q5T011 369 387 SZT2 Protein SZT2 yes yes 3 0.014337 32.091 By MS/MS 1 0 0 0 548 644 568 1203 958 958 1 LFQQIYSDGSDEVKR EGDAALNRLFQQIYSD DGSDEVKRAMNKSFME R L F K R A 0 1 0 2 0 2 1 1 0 1 1 1 0 1 0 2 0 0 1 1 0 0 15 1 1783.8741 Q9Y2Z0 Q9Y2Z0 312 326 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 3 0.0036186 49.216 By MS/MS By matching 1 1 667400 364520 302870 549 794 569 1204;1205 959 959 957 1 LFRHPPSQVTR QILGSTLKLFRHPPSQ HPPSQVTRLWGRHHLK K L F T R L 0 2 0 0 0 1 0 0 1 0 1 0 0 1 2 1 1 0 0 1 0 0 11 1 1336.7364 Q8N2B8 Q8N2B8 125 135 Putative uncharacterized protein FLJ33534 yes yes 2 0.0072042 61.235 By MS/MS 1 223950 0 223950 550 687 570 1206 960 960 541;834 1 LFYADHPFIFLVR REELRSPKLFYADHPF HPFIFLVRDTQSGSLL K L F V R D 1 1 0 1 0 0 0 0 1 1 2 0 0 3 1 0 0 0 1 1 0 0 13 0 1636.8766 E9PKH2;P50454;H0YEP8 E9PKH2 164 176 SERPINH1 Serpin H1 yes no 3 0.010309 42.809 By matching By MS/MS 1 1 1251100 717240 533820 551 266 571 1207;1208 961 961 1 LGAAPEEESAYVAGEK PFAGGGYRLGAAPEEE SAYVAGEKRQHSSQDV R L G E K R 4 0 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 16 0 1619.7679 F2Z2K0;Q9UNZ2 F2Z2K0 157 172 NSFL1C NSFL1 cofactor p47 yes no 2 1.0333E-08 103.44 By matching By MS/MS 1 1 2078500 779230 1299300 552 279 572 1209;1210 962;963 962 222;891 2 LGAAPEEESAYVAGEKR PFAGGGYRLGAAPEEE AYVAGEKRQHSSQDVH R L G K R Q 4 1 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 17 1 1775.869 F2Z2K0;Q9UNZ2 F2Z2K0 157 173 NSFL1C NSFL1 cofactor p47 yes no 2;3 1.3339E-224 186.05 By MS/MS By MS/MS 2 2 16600000 9153200 7446800 553 279 573 1211;1212;1213;1214 964;965;966 964 222;891 3 LGAGEGGEASVSPEKTSTTSK PRSKKKKKLGAGEGGE EKTSTTSKGKAKRDKA K L G S K G 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 4 3 0 0 1 0 0 21 1 1991.9647 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1349 TCOF1 Treacle protein yes no 3 7.2447E-06 76.744 By MS/MS By MS/MS 1 1 10938000 5606100 5332400 554 238 574 1215;1216 967;968 967 181 2 LGAGGGSPEKSPSAQELK EEKEGGARLGAGGGSP SPSAQELKEQGNRLFV R L G L K E 2 0 0 0 0 1 2 4 0 0 2 2 0 0 2 3 0 0 0 0 0 0 18 1 1711.8741 H3BS86;Q9UNE7 H3BS86 13 30 STUB1 E3 ubiquitin-protein ligase CHIP yes no 2;3 6.6096E-16 106.35 By MS/MS By matching 2 2 41873000 20169000 21703000 555 382 575 1217;1218;1219;1220 969;970 970 298 2 LGASNSPGQPNSVK PKIGLSLKLGASNSPG PGQPNSVKRKKLPVDS K L G V K R 1 0 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 14 0 1354.6841 P49756 P49756 672 685 RBM25 RNA-binding protein 25 yes yes 2 8.972E-53 149.35 By MS/MS By MS/MS 1 1 8207900 3772800 4435100 556 562 576 1221;1222 971;972 971 432 2 LGEASDSELADADK TSLLRRARLGEASDSE SELADADKASVASEVS R L G D K A 3 0 0 3 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 14 0 1419.6365 H0Y2V6;Q5SW79 H0Y2V6 1072 1085 CEP170 Centrosomal protein of 170 kDa yes no 2 0.014463 57.288 By matching By MS/MS 1 1 1128200 493470 634760 557 335 577 1223;1224 973 973 272 1 LGEHNIDVLEGNEQFINAAK YKSRIQVRLGEHNIDV EQFINAAKIITHPNFN R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 3 0.0020817 49.306 By MS/MS By MS/MS 1 1 13199000 6309800 6889400 + 558 198 578 1225;1226 974;975 975 2 LGELVVGPYDNTVVLEELR HPTGDDRRLGELVVGP TVVLEELRAGTTYKVN R L G L R A 0 1 1 1 0 0 3 2 0 0 4 0 0 0 1 0 1 0 1 4 0 0 19 0 2114.1259 D6RGG3;Q99715 D6RGG3 1130 1148 COL12A1 Collagen alpha-1(XII) chain yes no 2 5.5884E-05 78.287 By matching By MS/MS 1 1 15143000 9718800 5424600 559 218 579 1227;1228 976 976 1 LGEYEDVSR VIDHSGARLGEYEDVS GEYEDVSRVEKYTISQ R L G S R V 0 1 0 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1066.4931 K7EP07;K7EK42;Q99426;K7EL99 K7EP07 44 52 TBCB Tubulin-folding cofactor B yes no 2 0.0012397 109.48 By MS/MS By MS/MS 1 1 3217800 1294700 1923100 560 422 580 1229;1230 977;978 977 910 2 LGEYEDVSRVEK VIDHSGARLGEYEDVS EDVSRVEKYTISQEAY R L G E K Y 0 1 0 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 1 2 0 0 12 1 1422.6991 K7EP07;K7EK42;Q99426 K7EP07 44 55 TBCB Tubulin-folding cofactor B yes no 2 4.2904E-91 164.04 By MS/MS By MS/MS 1 1 6492500 3633500 2859000 561 422 581 1231;1232 979;980 980 910 2 LGLGTLSSSLSR ACCRDYQRLGLGTLSS TLSSSLSRAKSEPFRI R L G S R A 0 1 0 0 0 0 0 2 0 0 4 0 0 0 0 4 1 0 0 0 0 0 12 0 1189.6667 G5E933;O95248 G5E933 1134 1145 SBF1 Myotubularin-related protein 5 yes no 2 0.0079797 75.89 By matching By MS/MS 1 1 916110 414030 502080 562 330 582 1233;1234 981 981 750 1 LGSFEGLVNLTFIHLQHNR LTHNKITKLGSFEGLV FIHLQHNRLKEDAVSA K L G N R L 0 1 2 0 0 1 1 2 2 1 4 0 0 2 0 1 1 0 0 1 0 0 19 0 2194.1647 P51884 P51884 152 170 LUM Lumican yes yes 3;4 1.4883E-60 147.75 By MS/MS By MS/MS 2 2 15732000 5723400 10009000 563 567 583 1235;1236;1237;1238 982;983;984;985 984 83 4 LGSYSGPTSVSR AEGTRRDRLGSYSGPT SGPTSVSRQRVESLRK R L G S R Q 0 1 0 0 0 0 0 2 0 0 1 0 0 0 1 4 1 0 1 1 0 0 12 0 1209.599 V9GYZ0;Q9BZ23 V9GYZ0 64 75 PANK2 Pantothenate kinase 2, mitochondrial yes no 2 0.0032066 96.135 By MS/MS By MS/MS 1 1 1589700 737360 852390 564 741 584 1239;1240 986;987 987 592 2 LHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALR EEIAFLKKLHEEEIQE PDLTAALRDVRQQYES K L H L R D 3 1 0 3 0 6 5 0 2 3 4 1 0 0 1 1 1 0 0 3 0 0 34 1 3922.0072 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 237 270 VIM Vimentin yes no 4;5 3.6642E-14 71.289 By MS/MS By MS/MS 2 2 28110000 10284000 17826000 565 507 585 1241;1242;1243;1244 988;989;990 990 3 LIDLESPTPESQK TIEEDLKKLIDLESPT SPTPESQKSFKFHALS K L I Q K S 0 0 0 1 0 1 2 0 0 1 2 1 0 0 2 2 1 0 0 0 0 0 13 0 1455.7457 F5GYF8;O43166 F5GYF8 998 1010 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 0.007713 65.719 By MS/MS By MS/MS 1 1 795680 371140 424530 566 284 586 1245;1246 991;992 991 226;227 2 LIEDNEYTAR IADFGLARLIEDNEYT EDNEYTAREGAKFPIK R L I A R E 1 1 1 1 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1222.583 Q573B4;J3QRU1;P06239;P12931;P06241;P07947 Q573B4 395 404 LCK;YES1;SRC;FYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lck;Proto-oncogene tyrosine-protein kinase Src;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Yes yes no 2 1.0779E-05 128.12 By MS/MS By MS/MS 1 1 9819600 4229900 5589600 567 415 587 1247;1248 993;994 994 908 2 LIFEQTPALTK KPFECRQRLIFEQTPA EQTPALTKHEWTEALG R L I T K H 1 0 0 0 0 1 1 0 0 1 2 1 0 1 1 0 2 0 0 0 0 0 11 0 1259.7125 P17098 P17098 431 441 ZNF8 Zinc finger protein 8 yes yes 2 0.014227 58.981 By MS/MS 1 307480 307480 0 568 528 588 1249 995 995 1 LISQIVSSITASLR PTYTNLNRLISQIVSS SSITASLRFDGALNVD R L I L R F 1 1 0 0 0 1 0 0 0 3 2 0 0 0 0 4 1 0 0 1 0 0 14 0 1486.8719 P68363;F5H5D3;P68366;Q9BQE3;F8VVB9;C9J2C0;Q9NY65;C9JDS9;Q9H853 P68363 230 243 TUBA1B;TUBA1C;TUBA4A;TUBA8;TUBA4B Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain;Putative tubulin-like protein alpha-4B yes no 2 0.0015332 88.187 By matching By MS/MS 1 1 3684700 1544300 2140400 569 584 589 1250;1251 996 996 1 LISVDTEHSNIYLQNGPNR ASDYGEKKLISVDTEH YLQNGPNRIGSVYKKA K L I N R I 0 1 3 1 0 1 1 1 1 2 2 0 0 0 1 2 1 0 1 1 0 0 19 0 2169.0814 CON__ENSEMBL:ENSBTAP00000031900 CON__ENSEMBL:ENSBTAP00000031900 44 62 yes yes 3 0.013495 40.493 By MS/MS 1 0 0 0 + 570 196 590 1252 997 997 23;157 1 LISWYDNEFGYSNR ALNDHFVKLISWYDNE NEFGYSNRVVDLMAHM K L I N R V 0 1 2 1 0 0 1 1 0 1 1 0 0 1 0 2 0 1 2 0 0 0 14 0 1762.7951 E7EUT5;P04406 E7EUT5 235 248 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.00098007 91.936 By MS/MS By matching 1 1 1555500 870700 684810 571 240 591 1253;1254 998 998 1 LKATVTPSPVK EKKMPKPRLKATVTPS TVTPSPVKGKGKVGRP R L K V K G 1 0 0 0 0 0 0 0 0 0 1 2 0 0 2 1 2 0 0 2 0 0 11 1 1139.6914 Q9H1E3 Q9H1E3 174 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 2.6647E-10 129.17 By MS/MS By MS/MS 1 1 13250000 6946500 6303900 572 745 592 1255;1256 999;1000;1001 999 597;844;845 3 LKATVTPSPVKGK EKKMPKPRLKATVTPS TPSPVKGKGKVGRPTA R L K G K G 1 0 0 0 0 0 0 1 0 0 1 3 0 0 2 1 2 0 0 2 0 0 13 2 1324.8078 Q9H1E3 Q9H1E3 174 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0024657 62.891 By MS/MS By MS/MS 1 1 2030800 948320 1082400 573 745 593 1257;1258 1002;1003 1002 597;844;845 2 LKDLFDYSPPLHK PEQVKSEKLKDLFDYS DYSPPLHKNLDAREKS K L K H K N 0 0 0 2 0 0 0 0 1 0 3 2 0 1 2 1 0 0 1 0 0 0 13 1 1571.8348 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09 E9PQN2 503 515 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.01219 44.567 By MS/MS 1 0 0 0 574 264 594 1259 1004 1004 205 1 LKLSPSPSSR LLEGEEERLKLSPSPS LSPSPSSRVTVSRATS R L K S R V 0 1 0 0 0 0 0 0 0 0 2 1 0 0 2 4 0 0 0 0 0 0 10 1 1070.6084 Q03252;P20700 Q03252 402 411 LMNB2;LMNB1 Lamin-B2;Lamin-B1 yes no 2 0.0029385 83.877 By matching By MS/MS 1 1 5130300 2567800 2562500 575 593 595 1260;1261 1005 1005 457;458 1 LKSEDGVEGDLGETQSR YTTKIKPRLKSEDGVE DLGETQSRTITVTRRV R L K S R T 0 1 0 2 0 1 3 3 0 0 2 1 0 0 0 2 1 0 0 1 0 0 17 1 1818.8595 Q09666 Q09666 133 149 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 3 3.3144E-07 94.922 By MS/MS By matching 1 1 1496500 778410 718130 576 600 596 1262;1263 1006 1006 462 1 LKVESGQIYKNPVTWLK ASILLNGKLKVESGQI KNPVTWLKDLLGGNSY K L K L K D 0 0 1 0 0 1 1 1 0 1 2 3 0 0 1 1 1 1 1 2 0 0 17 2 2002.1251 D6RJB7;Q8N7Z5 D6RJB7 1791 1807 ANKRD31 Putative ankyrin repeat domain-containing protein 31 yes no 2 0.0055592 45.873 By MS/MS By MS/MS 1 1 58531000 23292000 35239000 577 221 597 1264;1265 1007;1008 1008 164 723;885 2 LLAQAEGEPCYIR RVPVCHLRLLAQAEGE EGEPCYIRDSGVAPTD R L L I R D 2 1 0 0 1 1 2 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 13 0 1518.7501 H0YE41;E9PPF2;E9PM19;P29597 H0YE41 61 73 TYK2 Tyrosine-protein kinase;Non-receptor tyrosine-protein kinase TYK2 yes no 2 0.011071 46.406 By matching By MS/MS 1 1 717400 316120 401280 578 270 598 1266;1267 1009 1009 889 1 LLIYAVLPTGDVIGDSAK SDIAPVARLLIYAVLP DVIGDSAKYDVENCLA R L L A K Y 2 0 0 2 0 0 0 2 0 2 3 1 0 0 1 1 1 0 1 2 0 0 18 0 1844.0295 P01023 P01023 540 557 A2M Alpha-2-macroglobulin yes yes 2 0.00056432 73.082 By MS/MS By MS/MS 1 1 9161600 4337200 4824500 579 479 599 1268;1269 1010;1011 1011 2 LLLAEDSEEEVDFLSER QGETQPQRLLLAEDSE EVDFLSERRMVKKSRT R L L E R R 1 1 0 2 0 0 5 0 0 0 4 0 0 1 0 2 0 0 0 1 0 0 17 0 1992.9528 Q14676 Q14676 162 178 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 0.00063459 75.695 By matching By MS/MS 1 1 5278400 2475500 2802800 580 619 600 1270;1271 1012 1012 478 1 LLNKHKGNITFETMMEILR GRYCEGYKLLNKHKGN ETMMEILRDKPSGINM K L L L R D 0 1 2 0 0 0 2 1 1 2 3 2 2 1 0 0 2 0 0 0 0 0 19 2 2287.2181 Q0VDG4 Q0VDG4 246 264 SCRN3 Secernin-3 yes yes 3 0.010116 48.216 By MS/MS 1 0 0 0 581 601 601 1272 1013 1013 87 79 812 1 LLQDSVDFSLADAINTEFK RSSVPGVRLLQDSVDF DAINTEFKNTRTNEKV R L L F K N 2 0 1 3 0 1 1 0 0 1 3 1 0 2 0 2 1 0 0 1 0 0 19 0 2125.0579 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 79 97 VIM Vimentin yes no 2;3 1.3352E-06 98.694 By MS/MS By MS/MS 2 2 35141000 13709000 21432000 582 507 602 1273;1274;1275;1276 1014;1015;1016 1016 3 LLQDSVDFSLADAINTEFKNTR RSSVPGVRLLQDSVDF NTEFKNTRTNEKVELQ R L L T R T 2 1 2 3 0 1 1 0 0 1 3 1 0 2 0 2 2 0 0 1 0 0 22 1 2496.2496 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 79 100 VIM Vimentin yes no 3 0.002311 55.007 By MS/MS By MS/MS 1 1 5385100 3029400 2355700 583 507 603 1277;1278 1017;1018 1018 2 LLQTALFQPPR HRKKFQNKLLQTALFQ TALFQPPREKLHLCEE K L L P R E 1 1 0 0 0 2 0 0 0 0 3 0 0 1 2 0 1 0 0 0 0 0 11 0 1282.7398 H0YKN9;H0YMN1;H0YN45;H0YM10;H0YNH7;H0YNV8;Q5W5X9 H0YKN9 32 42 TTC23 Tetratricopeptide repeat protein 23 yes no 2 0.0048545 60.49 By MS/MS By matching 1 1 2346000 1074000 1272100 584 367 604 1279;1280 1019 1019 182;183 763 1 LLSMHTGHTANIFSVK WDPLHHKKLLSMHTGH TANIFSVKFLPHAGDR K L L V K F 1 0 1 0 0 0 0 1 2 1 2 1 1 1 0 2 2 0 0 1 0 0 16 0 1754.9138 Q8N5D0 Q8N5D0 82 97 WDTC1 WD and tetratricopeptide repeats protein 1 yes yes 2 0.0083001 42.243 By matching By MS/MS 1 1 1115500 619650 495800 585 691 605 1281;1282 1020 1020 86 542;543 1 LLTGSLEPVKENMK DLVVRLPRLLTGSLEP EPVKENMKVFNTRLFK R L L M K V 0 0 1 0 0 0 2 1 0 0 3 2 1 0 1 1 1 0 0 1 0 0 14 1 1557.8436 E5RIY4;E5RIK9;Q96E29 E5RIY4 96 109 MTERF3 Transcription termination factor 3, mitochondrial yes no 3 0.013737 40.373 By MS/MS 1 0 0 0 586 223 606 1283 1021 1021 31 28 160 1 LMFKTEGPDSD QSTSRHKKLMFKTEGP KTEGPDSD________ K L M S D - 0 0 0 2 0 0 1 1 0 0 1 1 1 1 1 1 1 0 0 0 0 0 11 1 1238.5489 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 224 234 TP53 Cellular tumor antigen p53 yes no 2 0.014229 68.355 By MS/MS By matching 1 1 4951800 2581300 2370500 587 38 607 1284;1285 1022 1022 21 1 LMLLLEVISGER EDFRDGLKLMLLLEVI LEVISGERLAKPERGK K L M E R L 0 1 0 0 0 0 2 1 0 1 4 0 1 0 0 1 0 0 0 1 0 0 12 0 1371.7796 G3V5M4;G3V2N5;A0A087WSZ2;P12814;P35609;Q08043;O43707 G3V5M4 42 53 ACTN1;ACTN3;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 yes no 2 1.1671E-90 163.38 By MS/MS By MS/MS 2 2 18692000 8306200 10386000 588 9 608;609 1286;1287;1288;1289 1023;1024;1025;1026 1023 1 4 LNFTDVTEFILLGLTSRR ________________ LLGLTSRREWQVLFFI M L N R R E 0 2 1 1 0 0 1 1 0 1 4 0 0 2 0 1 3 0 0 1 0 0 18 1 2094.1473 Q8NGP4 Q8NGP4 2 19 OR5M3 Olfactory receptor 5M3 yes yes 3 0.01432 27.496 By MS/MS By MS/MS 1 1 0 0 0 589 700 610 1290;1291 1027;1028 1027 2 LNHSPPQSSSR REKKFSRRLNHSPPQS SPPQSSSRYRENRSRD R L N S R Y 0 1 1 0 0 1 0 0 1 0 1 0 0 0 2 4 0 0 0 0 0 0 11 0 1208.5898 A0A087X0H9;Q5T8P6 A0A087X0H9 124 134 RBM26 RNA-binding protein 26 yes no 2 0.0099655 77.279 By MS/MS By matching 1 1 1186200 569780 616420 590 39 611 1292;1293 1029 1029 22 1 LNHVAAGLVSPSLK LMSTVDPKLNHVAAGL GLVSPSLKSDTSSKEI K L N L K S 2 0 1 0 0 0 0 1 1 0 3 1 0 0 1 2 0 0 0 2 0 0 14 0 1404.8089 Q5T760;Q5T757;Q05519 Q5T760 198 211 SRSF11 Serine/arginine-rich splicing factor 11 yes no 3 0.0012831 69.361 By MS/MS By MS/MS 1 1 1668500 722160 946340 591 595 612 1294;1295 1030;1031 1030 459 2 LNITAENDCRR VTSGSGHRLNITAEND TAENDCRRLHCSLRDL R L N R R L 1 2 2 1 1 0 1 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 11 1 1360.6517 H3BPG8;Q96QU8 H3BPG8 56 66 XPO6 Exportin-6 yes no 2 0.009326 61.958 By matching By MS/MS 1 1 876760 303270 573500 592 377 613 1296;1297 1032 1032 767 1 LNQPGTPTRTAV GWLCKTLRLNQPGTPT GTPTRTAV________ R L N A V - 1 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 3 0 0 1 0 0 12 1 1253.6728 M0R1B6;G5E9C7;P36507 M0R1B6 93 104 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 2 0.0076743 75.483 By MS/MS By matching 1 1 2605100 1390500 1214600 593 332 614 1298;1299 1033 1033 752 1 LPGLVFLYMEK IDQRVLEKLPGLVFLY LVFLYMEKNQLEEVPS K L P E K N 0 0 0 0 0 0 1 1 0 0 3 1 1 1 1 0 0 0 1 1 0 0 11 0 1308.7152 P51888 P51888 149 159 PRELP Prolargin yes yes 2 3.9078E-44 148.94 By MS/MS By MS/MS 2 2 20042000 9762900 10279000 594 568 615;616 1300;1301;1302;1303 1034;1035;1036;1037 1036 69 4 LPLLPPESPGPLR ERRGGGLRLPLLPPES PESPGPLRQRHVACLA R L P L R Q 0 1 0 0 0 0 1 1 0 0 4 0 0 0 5 1 0 0 0 0 0 0 13 0 1384.8078 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 765 777 SCRIB Protein scribble homolog yes no 2 0.0062294 70.089 By MS/MS By MS/MS 1 1 646760 364000 282760 595 88 617 1304;1305 1038;1039 1039 58 2 LPLVPESPRR GLEGRPERLPLVPESP LVPESPRRMMTRSQDA R L P R R M 0 2 0 0 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 10 1 1162.6822 C9J0I9;Q86WB0 C9J0I9 272 281 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.0012402 102.52 By MS/MS By MS/MS 1 1 2218600 737090 1481600 596 173 618 1306;1307 1040;1041;1042 1042 128 3 LPSGLPVSLLTLYLDNNK LSFNQIARLPSGLPVS TLYLDNNKISNIPDEY R L P N K I 0 0 2 1 0 0 0 1 0 0 6 1 0 0 2 2 1 0 1 1 0 0 18 0 1956.0932 P51884;CON__Q05443 P51884 199 216 LUM Lumican yes no 2 5.2699E-39 134.18 By MS/MS By MS/MS 1 1 7432600 3594300 3838300 597 567 619 1308;1309 1043;1044 1043 2 LPSSPVYEDAASFK APQPTEERLPSSPVYE YEDAASFKAELSYRGP R L P F K A 2 0 0 1 0 0 1 0 0 0 1 1 0 1 2 3 0 0 1 1 0 0 14 0 1509.7351 Q14247;H0YEV2;H0YCD9 Q14247 415 428 CTTN Src substrate cortactin yes no 2 0.00026768 84.753 By MS/MS By matching 1 1 4077000 1539900 2537000 598 615 620 1310;1311 1045 1045 473;933 1 LPTDLDVEGPWFRHYDFR LQWNSMPRLPTDLDVE WFRHYDFRQSCWVRAI R L P F R Q 0 2 0 3 0 0 1 1 1 0 2 0 0 2 2 0 1 1 1 1 0 0 18 1 2262.0858 A0A087WT91;A0A0G2JPY0;A0A0G2JP35;A0A0G2JMF6;A0A0G2JLM6;Q8IZP1;Q6IPX1;Q6DHY5;P0C7X1;B9A6J9;A6NER0;A6NDS4;A0A087X1G2;A0A087X179;A0A087WXS9;A0A087WVF3 A0A087WT91 458 475 TBC1D3F;TBC1D3;TBC1D3C;TBC1D3G;TBC1D3H;TBC1D3L;TBC1D3B;TBC1D3K;TBC1D3E;TBC1D3I;TBC1D3D TBC1 domain family member 3;TBC1 domain family member 3C;TBC1 domain family member 3G;TBC1 domain family member 3H;TBC1 domain family member 3L;TBC1 domain family member 3F;TBC1 domain family member 3B;TBC1 domain family member 3K;TBC1 domain family member 3E;TBC1 domain family member 3I;TBC1 domain family member 3D yes no 3 0.014859 37.092 By MS/MS 1 0 0 0 599 10 621 1312 1046 1046 1 LQHLENELTHDIITK FFLPDEGKLQHLENEL LTHDIITKFLENEDRR K L Q T K F 0 0 1 1 0 1 2 0 2 2 3 1 0 0 0 0 2 0 0 0 0 0 15 0 1802.9527 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 284 298 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 4 0.010872 32.152 By MS/MS By matching 1 1 538000 337930 200070 600 1 622 1313;1314 1047 1047 1 LQLQEQLQAETELCAEAEELR QSQLMAEKLQLQEQLQ CAEAEELRARLTAKKQ K L Q L R A 3 1 0 0 1 4 6 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 21 0 2500.2115 P35579 P35579 883 903 MYH9 Myosin-9 yes yes 2;3 3.5085E-87 137.09 By MS/MS By MS/MS 2 2 24907000 13080000 11827000 601 551 623 1315;1316;1317;1318 1048;1049;1050;1051 1050 4 LQLTDFVSKAYGK KDTASCPKLQLTDFVS FVSKAYGKNLSQERPF K L Q G K N 1 0 0 1 0 1 0 1 0 0 2 2 0 1 0 1 1 0 1 1 0 0 13 1 1468.7926 Q6NXP6 Q6NXP6 284 296 NOXRED1 NADP-dependent oxidoreductase domain-containing protein 1 yes yes 2 0.012561 49.06 By MS/MS By matching 1 1 19048000 8996000 10052000 602 658 624 1319;1320 1052 1052 513;827 1 LQQGAGLESPQGQPEPGAASPQR KTSPGSPRLQQGAGLE PGAASPQRQQDLHLES R L Q Q R Q 3 1 0 0 0 5 2 4 0 0 2 0 0 0 4 2 0 0 0 0 0 0 23 0 2302.1302 Q9H6F5 Q9H6F5 72 94 CCDC86 Coiled-coil domain-containing protein 86 yes yes 3 0.012867 40.097 By matching By MS/MS 1 1 4371700 2198700 2173100 603 752 625 1321;1322 1053 1053 609 1 LQQQHSEQPPLQPSPVMTR MKTRRTTRLQQQHSEQ QPSPVMTRRGLRDSHS R L Q T R R 0 1 0 0 0 5 1 0 1 0 2 0 1 0 4 2 1 0 0 1 0 0 19 0 2200.1059 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 9 27 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.0069385 60.542 By matching By MS/MS 1 1 4042200 1947000 2095200 604 61 626 1323;1324 1054 1054 687 1 LQTPNTFPK TPQAKKIKLQTPNTFP QTPNTFPKRKKGEKRA K L Q P K R 0 0 1 0 0 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 0 0 9 0 1044.5604 A0A0A0MRM9;Q14978 A0A0A0MRM9 614 622 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0073607 75.695 By MS/MS By MS/MS 1 1 710230 404190 306040 605 57 627 1325;1326 1055;1056 1055 684;685 2 LQVELDNVTGLLSQSDSK ELADKVTKLQVELDNV LLSQSDSKSSKLTKDF K L Q S K S 0 0 1 2 0 2 1 1 0 0 4 1 0 0 0 3 1 0 0 2 0 0 18 0 1945.0004 P35579 P35579 1278 1295 MYH9 Myosin-9 yes yes 2 0.0048477 59.185 By MS/MS By matching 1 1 632840 317430 315410 606 551 628 1327;1328 1057 1057 1 LRINIDITVAMK VDKDFSSKLRINIDIT IDITVAMKCQYVGADV K L R M K C 1 1 1 1 0 0 0 0 0 3 1 1 1 0 0 0 1 0 0 1 0 0 12 1 1385.8065 F8W0R1;F8VR88;F8VUZ2;F8VPA6;A0A087WU02;Q96RQ1 F8W0R1 56 67 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 yes no 1 0.012776 31.634 By MS/MS By matching 1 1 3004400 1403500 1600900 607 16 629 1329;1330 1058 1058 1 LRSVPIQSLSELERAR SMSGRSVRLRSVPIQS LSELERARLQEVAFYQ R L R A R L 1 3 0 0 0 1 2 0 0 1 3 0 0 0 1 3 0 0 0 1 0 0 16 2 1853.0483 H7BYE6;O43182 H7BYE6 47 62 ARHGAP6 Rho GTPase-activating protein 6 yes no 3 0.00077275 72.175 By MS/MS 1 0 0 0 608 387 630 1331 1059 1059 185 301 1 LSASTASELSPK LPASPRARLSASTASE TASELSPKSKARPSSP R L S P K S 2 0 0 0 0 0 1 0 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1189.619 H0YF21;Q3KQU3 H0YF21 34 45 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.0022549 97.273 By matching By MS/MS 1 1 1350600 631210 719340 609 362 631 1332;1333 1060 1060 286 1 LSDAGITPLFLTR QLREAVLKLSDAGITP ITPLFLTRQEDRQLIN K L S T R Q 1 1 0 1 0 0 0 1 0 1 3 0 0 1 1 1 2 0 0 0 0 0 13 0 1402.782 E7ENL6;P12111 E7ENL6 1925 1937 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.010686 58.676 By MS/MS By matching 1 1 548470 269030 279450 610 227 632 1334;1335 1061 1061 1 LSELEAALQR AIKDANAKLSELEAAL ELEAALQRAKQDMARQ K L S Q R A 2 1 0 0 0 1 2 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 10 0 1128.6139 CON__H-INV:HIT000292931;CON__P05787;P05787;CON__REFSEQ:XP_092267;CON__Q9H552 CON__H-INV:HIT000292931 313 322 KRT8 Keratin, type II cytoskeletal 8 yes no 2 0.014844 62.582 By matching By MS/MS 1 1 323820 165540 158280 + 611 197 633 1336;1337 1062 1062 1 LSGWSGSSSQR L S Q R 0 1 0 0 0 1 0 2 0 0 1 0 0 0 0 5 0 1 0 0 0 0 11 0 1150.5367 REV__M0QZC0 yes yes 2 0.014662 58.596 By matching By MS/MS 1 2 1460600 338530 1122000 + 612 806 634 1338;1339;1340 1063 1063 1 LSITGTYDLK SASLHLPKLSITGTYD ITGTYDLKSVLGQLGI K L S L K S 0 0 0 1 0 0 0 1 0 1 2 1 0 0 0 1 2 0 1 0 0 0 10 0 1109.5968 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 315 324 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.01108 67.897 By MS/MS By matching 1 1 1708000 754580 953460 613 1 635 1341;1342 1064 1064 1 LSLEGDHSTPPSAYGSVK TVHEILCKLSLEGDHS PSAYGSVKAYTNFDAE K L S V K A 1 0 0 1 0 0 1 2 1 0 2 1 0 0 2 4 1 0 1 1 0 0 18 0 1843.8952 H0YMM1;H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;H0YMD9;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;A6NMY6;H0YNB8;H0YKN4 H0YMM1 11 28 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 3 0.00062087 70.784 By MS/MS By matching 1 1 689230 351300 337930 614 368 636 1343;1344 1065 1065 290 1 LSPNDQYKVPLDGSR NNPEPWNRLSPNDQYK KVPLDGSRVAPHPLIS R L S S R V 0 1 1 2 0 1 0 1 0 0 2 1 0 0 2 2 0 0 1 1 0 0 15 1 1687.8529 G3V560 G3V560 62 76 NDUFA4L2 yes yes 2 1.7689E-10 50.354 By matching By MS/MS 1 1 1888500 948920 939570 615 324 637 1345;1346 1066 1066 898 0 LSSQISAGEEK GWNEKSVKLSSQISAG QISAGEEKWNSVSPAS K L S E K W 1 0 0 0 0 1 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 11 0 1147.5721 H0YB56;E5RJU9;Q86UE4 H0YB56 176 186 MTDH Protein LYRIC yes no 2 0.0052157 96.059 By MS/MS By MS/MS 1 1 4738800 2251700 2487100 616 225 638 1347;1348 1067;1068 1067 162 2 LSSTDDGYIDLQFK SSKVKYSRLSSTDDGY GYIDLQFKKTPPKIPY R L S F K K 0 0 0 3 0 1 0 1 0 1 2 1 0 1 0 2 1 0 1 0 0 0 14 0 1600.7621 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 22 35 TMEM230 Transmembrane protein 230 yes no 2 0.0053434 77.192 By matching By MS/MS 1 1 2636800 1123400 1513400 617 14 639 1349;1350 1069 1069 673 1 LSSWDQAETPGHTPSLR TPGATPKKLSSWDQAE PGHTPSLRWDETPGRA K L S L R W 1 1 0 1 0 1 1 1 1 0 2 0 0 0 2 3 2 1 0 0 0 0 17 0 1880.9017 O75533 O75533 215 231 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.0054011 43.116 By MS/MS By matching 1 1 680240 334840 345400 618 458 640 1351;1352 1070 1070 781 0 LSVPTSDEEDEVPAPKPR ________________ EVPAPKPRGGKKTKGG K L S P R G 1 1 0 2 0 0 3 0 0 0 1 1 0 0 4 2 1 0 0 2 0 0 18 1 1964.9691 F5GYK6;Q5STZ8;Q8NE71 F5GYK6 7 24 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 1.4751E-05 85.203 By MS/MS By MS/MS 2 1 7673900 4423300 3250500 619 285 641 1353;1354;1355 1071;1072;1073 1071 228;738 3 LTCLVTDLTTYDSVTISWTR IFLTKSTKLTCLVTDL SVTISWTRQNGEAVKT K L T T R Q 0 1 0 2 1 0 0 0 0 1 3 0 0 0 0 2 6 1 1 2 0 0 20 0 2344.1621 A0A087WYJ9;A0A1B0GUU9;P04220;P01871 A0A087WYJ9 241 260 IGHM Ig mu heavy chain disease protein;Ig mu chain C region yes no 2 0.0029346 62.68 By MS/MS 1 4296600 0 4296600 620 35 642 1356 1074 1074 1 LTNLQENLSEVSQVKETLEK ELQGRELKLTNLQENL QVKETLEKELQILKEK K L T E K E 0 0 2 0 0 2 4 0 0 0 4 2 0 0 0 2 2 0 0 2 0 0 20 1 2301.2064 F5H6A0;J3KP58;P30622 F5H6A0 679 698 CLIP1 CAP-Gly domain-containing linker protein 1 yes no 3 0.0092371 50.392 By MS/MS 1 208270 0 208270 621 294 643 1357 1075 1075 36;37;174 237;741 0 LTQAELEKLLLDDSFETKK ALDIDVEKLTQAELEK DDSFETKKTPVLPVTP K L T K K T 1 0 0 2 0 1 3 0 0 0 5 3 0 1 0 1 2 0 0 0 0 0 19 2 2220.1889 E9PPP3;A0A0C4DGF9;O00443 E9PPP3 95 113 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes no 2 0.01293 42.277 By MS/MS 1 0 0 0 622 78 644 1358 1076 1076 690 1 LTTPQPGNR RAPGKDVRLTTPQPGN TTPQPGNRGLLFEVGD R L T N R G 0 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 2 0 0 0 0 0 9 0 982.51959 P08F94 P08F94 320 328 PKHD1 Fibrocystin yes yes 2 0.013465 46.426 By MS/MS By MS/MS 1 1 772660 347880 424780 623 509 645 1359;1360 1077;1078 1078 76 791;792 2 LTTTGQVTSPVK KKAVVQAKLTTTGQVT GQVTSPVKGASFVTST K L T V K G 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 1 4 0 0 2 0 0 12 0 1230.682 K7ENR9;K7ERZ5;P49916 K7ENR9 115 126 LIG3 DNA ligase 3 yes no 2 0.013649 63.662 By matching By MS/MS 1 1 6803400 3129000 3674400 624 424 646 1361;1362 1079 1079 332 1 LVAIVDVIDQNR SFGPHAGKLVAIVDVI VDVIDQNRALVDGPCT K L V N R A 1 1 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 3 0 0 12 0 1353.7616 E7EPB3;P50914 E7EPB3 24 35 RPL14 60S ribosomal protein L14 yes no 2 0.0016323 85.29 By MS/MS By MS/MS 1 1 1108000 493700 614300 625 230 647 1363;1364 1080;1081;1082;1083 1081 4 LVDYLDVGFDTTR YVRTLIERLVDYLDVG DVGFDTTRVAVIQFSD R L V T R V 0 1 0 3 0 0 0 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1512.746 E7ENL6;P12111 E7ENL6 651 663 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.011659 57.348 By MS/MS By MS/MS 1 1 780150 415450 364700 626 227 648 1365;1366 1084;1085 1084 2 LVEWIIVQCGPDVGRPDR YDEELEERLVEWIIVQ PDVGRPDRGRLGFQVW R L V D R G 0 2 0 2 1 1 1 2 0 2 1 0 0 0 2 0 0 1 0 3 0 0 18 1 2108.0837 E9PJ32;Q01995 E9PJ32 30 47 TAGLN Transgelin yes no 3 0.010765 44.807 By matching By MS/MS 1 1 2140400 1108800 1031600 627 260 649 1367;1368 1086 1086 1 LVIVEEASR L V S R 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 0 2 0 0 9 0 1014.571 REV__A0A0A0MR08 yes no 2 0.014666 74.301 By matching By MS/MS 1 2 803580 137130 666450 + 628 803 650 1369;1370;1371 1087 1087 1 LVLAESPQPK GEHQQNSKLVLAESPQ LAESPQPKGKNK____ K L V P K G 1 0 0 0 0 1 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1080.6179 E7EUR8;A0A1B0GVL4;P78312 E7EUR8 993 1002 FAM193A Protein FAM193A yes no 2 0.011634 75.819 By MS/MS By matching 1 1 642320 299830 342490 629 110 651 1372;1373 1088 1088 77 1 LVLLNAIYLSAK DSLPSDTRLVLLNAIY NAIYLSAKWKTTFDPK R L V A K W 2 0 1 0 0 0 0 0 0 1 4 1 0 0 0 1 0 0 1 1 0 0 12 0 1316.8068 H9KV48;P05155 H9KV48 287 298 SERPING1 Plasma protease C1 inhibitor yes no 2 0.0096265 69.346 By matching By MS/MS 1 1 2442200 1191900 1250300 630 399 652 1374;1375 1089 1089 1 LVQASGQKAPR GLYGAIFRLVQASGQK ASGQKAPRPAARRKAR R L V P R P 2 1 0 0 0 2 0 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 11 1 1153.6568 O95977 O95977 229 239 S1PR4 Sphingosine 1-phosphate receptor 4 yes yes 3 0.010557 50.088 By MS/MS By matching 1 1 1257100 531710 725380 631 473 653 1376;1377 1090 1090 204 382 1 LVRLSSDSFAR SDPALRSKLVRLSSDS LSSDSFARLVELFCSR K L V A R L 1 2 0 1 0 0 0 0 0 0 2 0 0 1 0 3 0 0 0 1 0 0 11 1 1249.6779 A0A087WSV0;Q9HB09 A0A087WSV0 154 164 BCL2L12 Bcl-2-like protein 12 yes no 2 0.014108 68.463 By MS/MS By matching 1 1 893100 412600 480510 632 8 654 1378;1379 1091 1091 4 1 LWAYLTIQELLAK MLENHVERLWAYLTIQ TIQELLAKRMKVDREE R L W A K R 2 0 0 0 0 1 1 0 0 1 4 1 0 0 0 0 1 1 1 0 0 0 13 0 1560.8916 P19827;H7C0N0;CON__Q0VCM5 P19827 565 577 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 2 0.0017334 94.297 By MS/MS By MS/MS 1 1 7525200 2569800 4955400 633 534 655 1380;1381 1092;1093 1092 2 LWSGYSLLYFEGQEK MCPVGMNKLWSGYSLL LYFEGQEKAHNQDLGL K L W E K A 0 0 0 0 0 1 2 2 0 0 3 1 0 1 0 2 0 1 2 0 0 0 15 0 1818.8829 P08572 P08572 1511 1525 COL4A2 Collagen alpha-2(IV) chain;Canstatin yes yes 2 0.00080572 86.313 By MS/MS By MS/MS 1 1 5224600 1759700 3465000 634 506 656 1382;1383 1094;1095 1094 2 LYHSEAFTVNFGDTEEAK KFLEDVKKLYHSEAFT FGDTEEAKKQINDYVE K L Y A K K 2 0 1 1 0 0 3 1 1 0 1 1 0 2 0 1 2 0 1 1 0 0 18 0 2056.9378 A0A0G2JRN3;A0A024R6I7;P01009;G3V2B9 A0A0G2JRN3 161 178 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 3 0.0060652 34.748 By MS/MS 1 1240200 1240200 0 635 1 657 1384 1096 1096 1 LYHSEAFTVNFGDTEEAKK KFLEDVKKLYHSEAFT GDTEEAKKQINDYVEK K L Y K K Q 2 0 1 1 0 0 3 1 1 0 1 2 0 2 0 1 2 0 1 1 0 0 19 1 2185.0328 A0A0G2JRN3;A0A024R6I7;P01009;G3V2B9 A0A0G2JRN3 161 179 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 3 0.014848 28.14 By MS/MS By matching 1 1 1758500 1115800 642670 636 1 658 1385;1386 1097 1097 0 LYLVQGTQVYVFLTK AAFSWEEKLYLVQGTQ QVYVFLTKGGYTLVSG K L Y T K G 0 0 0 0 0 2 0 1 0 0 3 1 0 1 0 0 2 0 2 3 0 0 15 0 1770.992 P02790 P02790 318 332 HPX Hemopexin yes yes 2 1.3063E-10 106.67 By MS/MS 1 5390500 0 5390500 637 488 659 1387 1098 1098 1 LYNTLDDLLLYINAR GRLLEYYRLYNTLDDL LLLYINARELRITYGQ R L Y A R E 1 1 2 2 0 0 0 0 0 1 5 0 0 0 0 0 1 0 2 0 0 0 15 0 1808.9672 Q6UX06 Q6UX06 305 319 OLFM4 Olfactomedin-4 yes yes 2;3 0 209.19 By MS/MS By MS/MS 2 2 48175000 24187000 23989000 638 668 660 1388;1389;1390;1391 1099;1100;1101;1102 1100 4 LYSLMKQLENQEVAR LSAVADVRLYSLMKQL LENQEVARWVFFCQLC R L Y A R W 1 1 1 0 0 2 2 0 0 0 3 1 1 0 0 1 0 0 1 1 0 0 15 1 1820.9455 H3BS45;F5H1S1;Q92521 H3BS45 149 163 PIGB GPI mannosyltransferase 3 yes no 2 0.01051 41.092 By MS/MS 1 204450 204450 0 639 290 661 1392 1103 1103 232;893 1 LYTATSLMQIDDNVMR LEDTDLSRLYTATSLM QIDDNVMRKFHGYNSL R L Y M R K 1 1 1 2 0 1 0 0 0 1 2 0 2 0 0 1 2 0 1 1 0 0 16 0 1869.8965 P08910 P08910 294 309 ABHD2 Abhydrolase domain-containing protein 2 yes yes 2 0.013478 43.628 By MS/MS 1 0 0 0 640 508 662 1393 1104 1104 206 790 1 LYVYNDGYLLNYDLSVLQKPQ NYNPFDQKLYVYNDGY LSVLQKPQ________ K L Y P Q - 0 0 2 2 0 2 0 1 0 0 5 1 0 0 1 1 0 0 4 2 0 0 21 1 2517.2791 Q6UX06 Q6UX06 490 510 OLFM4 Olfactomedin-4 yes yes 2;3 1.166E-140 166.28 By MS/MS By MS/MS 2 2 69314000 27851000 41463000 641 668 663 1394;1395;1396;1397 1105;1106;1107 1106 3 MALDIEIATYR YQDLLNVKMALDIEIA DIEIATYRKLLEGEES K M A Y R K 2 1 0 1 0 0 1 0 0 2 1 0 1 0 0 0 1 0 1 0 0 0 11 0 1294.6591 P08670;B0YJC4;B0YJC5;H7C5W5;P41219 P08670 391 401 VIM;PRPH Vimentin;Peripherin yes no 2 0.010802 81.972 By matching By MS/MS 1 1 983600 488000 495600 642 507 664 1398;1399 1108 1108 61 1 MATGSAQGNFTGHTKK ________________ NFTGHTKKTNGNNGTN - M A K K T 2 0 1 0 0 1 0 3 1 0 0 2 1 1 0 1 3 0 0 0 0 0 16 1 1634.7835 K7EKN9;Q9HCJ0 K7EKN9 1 16 TNRC6C Trinucleotide repeat-containing gene 6C protein yes no 2 0.014851 28.764 By MS/MS 1 0 0 0 643 423 665 1400 1109 1109 1 MAVTFIGNSTAIQELFK DIPPRGLKMAVTFIGN TAIQELFKRISEQFTA K M A F K R 2 0 1 0 0 1 1 1 0 2 1 1 1 2 0 1 2 0 0 1 0 0 17 0 1868.9706 Q5JP53;P07437;Q5ST81 Q5JP53 345 361 TUBB Tubulin beta chain yes no 2 5.0716E-89 154.47 By MS/MS By MS/MS 2 2 41363000 17064000 24299000 644 499 666;667 1401;1402;1403;1404 1110;1111;1112;1113 1113 57 4 MDSYSAPESTPSASSR ________________ STPSASSRPEDYFIGA - M D S R P 2 1 0 1 0 0 1 0 0 0 0 0 1 0 2 6 1 0 1 0 0 0 16 0 1671.7046 Q8N0S6 Q8N0S6 1 16 CENPL Centromere protein L yes yes 2 0.011669 42.382 By MS/MS 1 0 0 0 645 685 668 1405 1114 1114 538;539;833;945 1 MENYELIHSSR FGNKTTGKMENYELIH YELIHSSRVKFTYPSE K M E S R V 0 1 1 0 0 0 2 0 1 1 1 0 1 0 0 2 0 0 1 0 0 0 11 0 1377.6347 Q9Y2I1 Q9Y2I1 1304 1314 NISCH Nischarin yes yes 2 0.0041486 63.694 By MS/MS By matching 1 1 541280 253220 288050 646 791 669 1406;1407 1115 1115 956 1 METVSNASSSSNPSSPGR QSQTKSSRMETVSNAS SNPSSPGRIKGRLDSS R M E G R I 1 1 2 0 0 0 1 1 0 0 0 0 1 0 2 7 1 0 0 1 0 0 18 0 1793.785 Q9NTI5;A9IYQ1 Q9NTI5 1152 1169 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 0.0030168 69.081 By matching By MS/MS 1 1 1464800 604070 860750 647 762 670 1408;1409 1116 1116 620;621 1 MFPYCRYWITGLDSNLK ILTKQGRRMFPYCRYW TGLDSNLKYILVMDIS R M F L K Y 0 1 1 1 1 0 0 1 0 1 2 1 1 1 1 1 1 1 2 0 0 0 17 1 2163.0282 H3BP52;H3BTF4;Q8IWI9 H3BP52 104 120 MGA MAX gene-associated protein yes no 3 0.01172 34.277 By MS/MS 1 6076600 0 6076600 648 375 671 1410 1117 1117 1 MGPTELLIEMEDWK DKISQLTRMGPTELLI LIEMEDWKGDKVKAHY R M G W K G 0 0 0 1 0 0 3 1 0 1 2 1 2 0 1 0 1 1 0 0 0 0 14 0 1690.7946 D6REL8;P02675 D6REL8 116 129 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 2 0 231.17 By MS/MS By MS/MS 1 1 20093000 11387000 8705800 + 649 216 672 1411;1412 1118;1119 1119 26 2 MLEKCSVFQCLLNLCSLK SCHPHGVKMLEKCSVF LLNLCSLKNQDHLLKL K M L L K N 0 0 1 0 3 1 1 0 0 0 5 2 1 1 0 2 0 0 0 1 0 0 18 1 2242.0982 Q6R327 Q6R327 675 692 RICTOR Rapamycin-insensitive companion of mTOR yes yes 3 0.011239 44.005 By MS/MS 1 0 0 0 650 665 673 1413 1120 1120 1 MLMNIEKVQIHFGGSTK RLRSMHSKMLMNIEKV IHFGGSTKASSQIIRE K M L T K A 0 0 1 0 0 1 1 2 1 2 1 2 2 1 0 1 1 0 0 1 0 0 17 1 1931.9961 H0YDB9;A0A1B0GW36;Q9H0J4 H0YDB9 150 166 QRICH2 Glutamine-rich protein 2 yes no 3 0.010104 45.54 By MS/MS 1 0 0 0 651 112 674 1414 1121 1121 14 20 78;697 1 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR QRLFENLRMLPHAPGV DGEDPDKRISIRASDK R M L K R I 3 1 0 6 0 2 4 3 2 1 1 1 2 0 4 1 0 0 0 2 0 0 33 1 3584.5784 Q92769 Q92769 373 405 HDAC2 Histone deacetylase 2 yes yes 4 0.0021141 42.468 By MS/MS By matching 1 1 2361700 1218500 1143200 652 711 675 1415;1416 1122 1122 88;89 565 0 MNRTAMRASQK ________________ TAMRASQKDFENSMNQ - M N Q K D 2 2 1 0 0 1 0 0 0 0 0 1 2 0 0 1 1 0 0 0 0 0 11 2 1292.6442 F8WAW4;A0A0C4DGA2 F8WAW4 1 11 ECI2 yes no 2 0.0012222 84.821 By MS/MS 1 794140 794140 0 653 76 676 1417 1123 1123 689 1 MPCAEDYLSVVLNQLCVLHEK CKHPEAKRMPCAEDYL QLCVLHEKTPVSDRVT R M P E K T 1 0 1 1 2 1 2 0 1 0 4 1 1 0 1 1 0 0 1 3 0 0 21 0 2517.2066 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;C9JKR2;A0A087WWT3 A0A0C4DGB6 470 490 ALB Serum albumin yes no 3 4.6294E-51 137.13 By MS/MS By MS/MS 2 2 33650000 18297000 15354000 + 654 77 677;678 1418;1419;1420;1421 1124;1125;1126;1127 1126 14 4 MQNNEELPTYEEAK MEKQLSPRMQNNEELP LPTYEEAKVQSQYFRG R M Q A K V 1 0 2 0 0 1 4 0 0 0 1 1 1 0 1 0 1 0 1 0 0 0 14 0 1694.7458 Q4VCS5 Q4VCS5 100 113 AMOT Angiomotin yes yes 2 0.00027545 85.288 By MS/MS By MS/MS 1 1 2642100 1143300 1498800 655 637 679 1422;1423 1128;1129 1128 83 821;939 2 MRDVVLSIVNDLTIAESNCPR VNQDTFGRMRDVVLSI IAESNCPRGARVAVVT R M R P R G 1 2 2 2 1 0 1 0 0 2 2 0 1 0 1 2 1 0 0 3 0 0 21 1 2401.2094 E7ENL6;P12111 E7ENL6 1813 1833 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.0020919 58.755 By MS/MS 1 1465000 0 1465000 656 227 680 1424 1130 1130 29 1 MSGTVHQIPQGDRQMRPPK EAMSELDKMSGTVHQI DRQMRPPKPKRRKISR K M S P K P 0 2 0 1 0 3 0 2 1 1 0 1 2 0 3 1 1 0 0 1 0 0 19 2 2162.0837 A0A1B0GW10;H7C066;E9PHH0;Q9P267 A0A1B0GW10 670 688 MBD5 Methyl-CpG-binding domain protein 5 yes no 3 0.0067218 41.871 By MS/MS 1 913010 0 913010 657 111 681 1425 1131 1131 139;140 0 MTEDHVLPELNKMTQK WLYVAMLRMTEDHVLP ELNKMTQKDITFVAEF R M T Q K D 0 0 1 1 0 1 2 0 1 0 2 2 2 0 1 0 2 0 0 1 0 0 16 1 1912.9387 Q9UJX5 Q9UJX5 428 443 ANAPC4 Anaphase-promoting complex subunit 4 yes yes 3 0.0065693 41.967 By MS/MS 1 1839600 1839600 0 658 778 682 1426 1132 1132 113 101 852;853 1 MTTESAGQKIK SEMPGPARMTTESAGQ ESAGQKIKELLSGIGN R M T I K E 1 0 0 0 0 1 1 1 0 1 0 2 1 0 0 1 2 0 0 0 0 0 11 1 1192.6122 Q0VG06 Q0VG06 446 456 FAAP100 Fanconi anemia-associated protein of 100 kDa yes yes 2 0.0049846 60.436 By MS/MS By MS/MS 1 1 674410 361720 312690 659 602 683 1427;1428 1133;1134 1133 212 80 813;814 2 MYLGYEYVTAIR VPPRMDAKMYLGYEYV YEYVTAIRNLREGTCP K M Y I R N 1 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 1 0 3 1 0 0 12 0 1477.7275 P02787 P02787 332 343 TF Serotransferrin yes yes 2 0.0090044 76.465 By MS/MS By MS/MS 2 2 9338800 3704200 5634600 660 487 684;685 1429;1430;1431;1432 1135;1136;1137 1137 52 3 NAEAVLQSPGLSGK VLTVDYTRNAEAVLQS QSPGLSGKVKRDAEKK R N A G K V 2 0 1 0 0 1 1 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1369.7201 Q13045 Q13045 849 862 FLII Protein flightless-1 homolog yes yes 2 1.8224E-07 103.79 By MS/MS By MS/MS 1 1 1015500 463160 552370 661 607 686 1433;1434 1138;1139 1139 466;467 2 NAEDCLYELPENIR EEQKVKPKNAEDCLYE YELPENIRVSSAKKTE K N A I R V 1 1 2 1 1 0 3 0 0 1 2 0 0 0 1 0 0 0 1 0 0 0 14 0 1734.7883 Q9NZ63 Q9NZ63 141 154 C9orf78 Uncharacterized protein C9orf78 yes yes 2 0.0047159 53.237 By MS/MS By matching 1 1 1003300 378580 624670 662 770 687 1435;1436 1140 1140 952 1 NAFACFDEEATGTIQEDYLR TDPEDVIRNAFACFDE TIQEDYLRELLTTMGD R N A L R E 3 1 1 2 1 1 3 1 0 1 1 0 0 2 0 0 2 0 1 0 0 0 20 0 2349.0219 J3QRS3;P19105;O14950 J3QRS3 110 129 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 2;3 0.00073308 84.566 By MS/MS By MS/MS 2 2 11268000 6499700 4768700 663 414 688 1437;1438;1439;1440 1141;1142;1143 1143 3 NAHSATTWSGQYVGGAEAR VAWKNNYRNAHSATTW YVGGAEARINTQWLLT R N A A R I 4 1 1 0 0 1 1 3 1 0 0 0 0 0 0 2 2 1 1 1 0 0 19 0 1961.898 CON__Streptavidin CON__Streptavidin 86 104 yes yes 3 9.0995E-24 120.11 By MS/MS By MS/MS 1 2 34046000 16806000 17240000 + 664 207 689 1441;1442;1443 1144;1145;1146;1147 1145 4 NALFCLESAWK TVTHPVVRNALFCLES FCLESAWKTAQEGDHG R N A W K T 2 0 1 0 1 0 1 0 0 0 2 1 0 1 0 1 0 1 0 0 0 0 11 0 1337.6438 P01023 P01023 1123 1133 A2M Alpha-2-macroglobulin yes yes 2 0.0051269 74.165 By MS/MS By matching 1 1 921550 455650 465900 665 479 690 1444;1445 1148 1148 1 NAPAAVDEGSISPR NRRQARGRNAPAAVDE DEGSISPRTLSAIKRA R N A P R T 3 1 1 1 0 0 1 1 0 1 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1382.679 R4GMW8;P28715 R4GMW8 799 812 BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells yes no 2 0.0023898 88.108 By MS/MS By MS/MS 1 1 1154600 586280 568350 666 545 691 1446;1447 1149;1150 1150 417 2 NASTFEDVTQVSSAYQK VQKDRMDKNASTFEDV QVSSAYQKTVPVEAVT K N A Q K T 2 0 1 1 0 2 1 0 0 0 0 1 0 1 0 3 2 0 1 2 0 0 17 0 1873.8694 Q14247 Q14247 320 336 CTTN Src substrate cortactin yes yes 3 0.012849 41.871 By matching By MS/MS 1 1 931430 438270 493160 667 615 692 1448;1449 1151 1151 474 1 NAVALSASPQLK LALANSSRNAVALSAS LSASPQLKEAQSEKEE R N A L K E 3 0 1 0 0 1 0 0 0 0 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1197.6717 Q92547 Q92547 881 892 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 0.0083465 68.034 By MS/MS By matching 1 1 641540 302620 338920 668 709 693 1450;1451 1152 1152 563;564 1 NAVTQFVSSMSASADVLALAK VGVAYAAKNAVTQFVS ADVLALAKIEIKLSDI K N A A K I 5 0 1 1 0 1 0 0 0 0 2 1 1 1 0 4 1 0 0 3 0 0 21 0 2109.0776 P47985;P0C7P4 P47985 131 151 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 yes no 3 0.0085692 40.381 By MS/MS By matching 1 1 2686700 1408500 1278200 669 513 694 1452;1453 1153 1153 62 1 NCGKSGVLQALLGRNLMVR RCNVIGVKNCGKSGVL LGRNLMVRRQKKIRED K N C V R R 1 2 2 0 1 1 0 3 0 0 4 1 1 0 0 1 0 0 0 2 0 0 19 2 2085.1299 K7EIQ7 K7EIQ7 10 28 RHOT1 yes yes 2 0.010181 47.712 By MS/MS 1 0 0 0 670 419 695 1454 1154 1154 52;53;196 1 NCPDSSDLHNNYGVFLVDTGLPEK EIYQTGIKNCPDSSDL VDTGLPEKAVAHYQQA K N C E K A 0 0 3 3 1 0 1 2 1 0 3 1 0 1 2 2 1 0 1 2 0 0 24 0 2690.2282 F8VXU8;F8VTQ9;Q8IUR5 F8VXU8 635 658 TMTC1 Transmembrane and TPR repeat-containing protein 1 yes no 3 0.014752 28.418 By MS/MS 1 129370 0 129370 671 306 696 1455 1155 1155 0 NDAPTPGTSTTPGLR KSNTPTPRNDAPTPGT TSTTPGLRSMPGKPPG R N D L R S 1 1 1 1 0 0 0 2 0 0 1 0 0 0 3 1 4 0 0 0 0 0 15 0 1483.7267 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 324 338 TLE3 Transducin-like enhancer protein 3 yes no 2 0.0039196 68.481 By MS/MS By MS/MS 1 1 859870 440790 419080 672 297 697 1456;1457 1156;1157 1157 743 1 NDFQLIGIQDGYLSLLQDSGEVR MDVPNIKRNDFQLIGI LQDSGEVREDLRLPEG R N D V R E 0 1 1 3 0 3 1 3 0 2 4 0 0 1 0 2 0 0 1 1 0 0 23 0 2579.2867 I3L397;I3L504;P63241 I3L397 87 109 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 2 2.7698E-05 92.977 By matching By MS/MS 1 1 20875000 9680900 11194000 673 402 698 1458;1459 1158 1158 1 NDLQDTEISPR EAWEASHKNDLQDTEI QDTEISPRQNRRTRAA K N D P R Q 0 1 1 2 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1286.6103 Q9NS91 Q9NS91 463 473 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 2 3.5798E-05 106.58 By matching By MS/MS 1 1 2406000 954010 1452000 674 761 699 1460;1461 1159 1159 851 1 NEEPSEEEIDAPKPK SKTKKVTKNEEPSEEE EIDAPKPKKMKKEKEM K N E P K K 1 0 1 1 0 0 5 0 0 1 0 2 0 0 3 1 0 0 0 0 0 0 15 1 1710.7948 Q9NR30 Q9NR30 117 131 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.00031436 91.845 By matching By MS/MS 1 1 2708500 1215500 1493000 675 758 700 1462;1463 1160 1160 616 1 NEKRGTSPVTQVK TVSPTGIKNEKRGTSP TSPVTQVKDEAAAQPL K N E V K D 0 1 1 0 0 1 1 1 0 0 0 2 0 0 1 1 2 0 0 2 0 0 13 2 1442.7841 P35712 P35712 405 417 SOX6 Transcription factor SOX-6 yes yes 2 0.012943 44.318 By MS/MS 1 0 0 0 676 552 701 1464 1161 1161 423;799 1 NFDFEGSLSPVIAPK TDRLAWTRNFDFEGSL LSPVIAPKKARPSETG R N F P K K 1 0 1 1 0 0 1 1 0 1 1 1 0 2 2 2 0 0 0 1 0 0 15 0 1619.8195 H0Y564;Q9H1A4 H0Y564 215 229 ANAPC1 Anaphase-promoting complex subunit 1 yes no 2 0.010682 58.626 By MS/MS By matching 1 1 1908300 905080 1003200 677 342 702 1465;1466 1162 1162 276 1 NFETTVFSEEKMSVSTWSR TSVVTYLKNFETTVFS MSVSTWSRKKYESKQF K N F S R K 0 1 1 0 0 0 3 0 0 0 0 1 1 2 0 4 3 1 0 2 0 0 19 1 2264.0419 J3QTJ6;Q5CZC0 J3QTJ6 3548 3566 FSIP2 Fibrous sheath-interacting protein 2 yes no 2 0.010929 45.369 By MS/MS 1 0 0 0 678 417 703 1467 1163 1163 51 327;328;776 1 NFHIFYQLLEGGEEETLR VHQNHGERNFHIFYQL GGEEETLRRLGLERNP R N F L R R 0 1 1 0 0 1 4 2 1 1 3 0 0 2 0 0 1 0 1 0 0 0 18 0 2194.0695 F5H6E2;O00159;I3L204 F5H6E2 212 229 MYO1C Unconventional myosin-Ic yes no 3 0.0032576 54.964 By MS/MS 1 1797100 0 1797100 679 295 704 1468 1164 1164 1 NFTKPQDGDVIAPLITPQKK FVQWCADRNFTKPQDG PLITPQKKEWNDSTSV R N F K K E 1 0 1 2 0 2 0 1 0 2 1 3 0 1 3 0 2 0 0 1 0 0 20 2 2209.2107 Q9Y3Z3 Q9Y3Z3 577 596 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 3 0.0084586 47.082 By MS/MS By MS/MS 1 1 1466300 644720 821540 680 798 705 1469;1470 1165;1166 1165 859 2 NGSEADIDEGLYSR VPTNGMAKNGSEADID IDEGLYSRQLYVLGHE K N G S R Q 1 1 1 2 0 0 2 2 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1524.6692 Q5JRS1;Q5JRS3;Q5JRS2;Q5JRR9;Q5JRS0;P22314 Q5JRS1 58 71 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 0.0011351 69.672 By matching By MS/MS 2 3 4391600 1877000 2514600 681 540 706;707 1471;1472;1473;1474;1475 1167;1168;1169 1167 79 413;924 3 NGSSGPILTVSLFGRWYTK KDGRLVNKNGSSGPIL LFGRWYTKDSLYSSCG K N G T K D 0 1 1 0 0 0 0 3 0 1 2 1 0 1 1 3 2 1 1 1 0 0 19 1 2082.0898 O95498 O95498 468 486 VNN2 Vascular non-inflammatory molecule 2 yes yes 2 0.012255 42.469 By MS/MS 1 0 0 0 682 471 708 1476 1170 1170 65 784;917 1 NGSSSDGIAHTEGILNRNHR PNRLLSAKNGSSSDGI GILNRNHRDASSLTNL K N G H R D 1 2 3 1 0 0 1 3 2 2 1 0 0 0 0 3 1 0 0 0 0 0 20 1 2134.0264 W4VSQ3;Q7Z2D5 W4VSQ3 204 223 LPPR4 Lipid phosphate phosphatase-related protein type 4 yes no 2 0.012587 43.594 By MS/MS 1 1391800 0 1391800 683 676 709 1477 1171 1171 93;94 524 1 NGSTAVAESVASPQK KPATGERKNGSTAVAE ESVASPQKTMSVLSCI K N G Q K T 3 0 1 0 0 1 1 1 0 0 0 1 0 0 1 3 1 0 0 2 0 0 15 0 1444.7158 C9JXV0;A6NNK5;Q12888 C9JXV0 982 996 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.013041 46.873 By MS/MS 1 0 0 0 684 125 710 1478 1172 1172 16 95 1 NHSDSSTSESEVSSVSPLK NLQQNEEKNHSDSSTS VSSVSPLKNKHPDEDA K N H L K N 0 0 1 1 0 0 2 0 1 0 1 1 0 0 1 8 1 0 0 2 0 0 19 0 1975.8971 H7C559;C9IZ04;Q9NY27 H7C559 43 61 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 3 0.00058889 70.615 By matching By MS/MS 1 1 1322300 552510 769820 685 169 711 1479;1480 1173 1173 124 1 NIILEEGKEILVGDVGQTVDDPYATFVK FCLSEDKKNIILEEGK DPYATFVKMLPDKDCR K N I V K M 1 0 1 3 0 1 3 3 0 3 2 2 0 1 1 0 2 0 1 4 0 0 28 1 3061.5859 E9PQB7;G3V1A4;E9PP50;E9PK25;P23528;E9PLJ3;E9PS23 E9PQB7 29 56 CFL1 Cofilin-1 yes no 3 1.4865E-11 55.158 By matching By MS/MS 1 1 4934100 2510800 2423200 686 263 712 1481;1482 1174;1175 1175 2 NILSQIVDIDGIWEGTR VEMPGCKKNILSQIVD DGIWEGTRDFAACNHL K N I T R D 0 1 1 2 0 1 1 2 0 4 1 0 0 0 0 1 1 1 0 1 0 0 17 0 1928.0003 P16233 P16233 257 273 PNLIP Pancreatic triacylglycerol lipase yes yes 2 0 206.66 By MS/MS By MS/MS 1 1 49720000 14738000 34981000 687 525 713 1483;1484 1176;1177 1176 2 NIPTVNENLENYYLEVNQLEK DLSYNKLKNIPTVNEN LEVNQLEKFDIKSFCK K N I E K F 0 0 5 0 0 1 4 0 0 1 3 1 0 0 1 0 1 0 2 2 0 0 21 0 2535.2493 P51884 P51884 268 288 LUM Lumican yes yes 2;3 1.8258E-12 81.12 By MS/MS By MS/MS 2 2 60139000 20433000 39707000 688 567 714 1485;1486;1487;1488 1178;1179;1180;1181 1179 4 NITRGQSLDNLIK KVDPETNKNITRGQSL QSLDNLIKVTPEVKRS K N I I K V 0 1 2 1 0 1 0 1 0 2 2 1 0 0 0 1 1 0 0 0 0 0 13 1 1470.8154 O95171 O95171 383 395 SCEL Sciellin yes yes 2 0.0058783 46.796 By matching By MS/MS 1 1 552200 266390 285810 689 463 715 1489;1490 1182 1182 62;63;202 374 1 NIYVLQELDNPGAK DKNSVNFKNIYVLQEL ELDNPGAKRILELDQF K N I A K R 1 0 2 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 14 0 1572.8148 B1AHC9;P12956 B1AHC9 51 64 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.0028176 65.5 By MS/MS By matching 1 1 383070 186580 196480 690 135 716 1491;1492 1183 1183 1 NKPGPNIESGNEDDDASFK KGQKKNQKNKPGPNIE EDDDASFKIKTVAQKK K N K F K I 1 0 3 3 0 0 2 2 0 1 0 2 0 1 2 2 0 0 0 0 0 0 19 1 2032.8974 A0A087WUT6;O60841 A0A087WUT6 206 224 EIF5B Eukaryotic translation initiation factor 5B yes no 3 4.0686E-05 77.584 By MS/MS By matching 1 1 21782000 9456300 12326000 691 20 717 1493;1494 1184 1184 8 1 NKPGPNIESGNEDDDASFKIK KGQKKNQKNKPGPNIE DDASFKIKTVAQKKAE K N K I K T 1 0 3 3 0 0 2 2 0 2 0 3 0 1 2 2 0 0 0 0 0 0 21 2 2274.0764 A0A087WUT6;O60841 A0A087WUT6 206 226 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0021052 64.249 By MS/MS By matching 1 1 7979500 3833400 4146200 692 20 718 1495;1496 1185 1185 8 1 NKQEKPASSLDDVFLPK KGRSRRSRNKQEKPAS LDDVFLPKDMDGVEMD R N K P K D 1 0 1 2 0 1 1 0 0 0 2 3 0 1 2 2 0 0 0 1 0 0 17 2 1915.0051 H0Y9G1;H0YCX2;Q96PV7 H0Y9G1 94 110 FAM193B Protein FAM193B yes no 3 0.010786 45.33 By MS/MS 1 0 0 0 693 350 719 1497 1186 1186 1 NKVHVIQPK DRVWCGYKNKVHVIQP KVHVIQPKTMQIEKSF K N K P K T 0 0 1 0 0 1 0 0 1 1 0 2 0 0 1 0 0 0 0 2 0 0 9 1 1061.6346 E9PFH7;A0A087WYG2;Q9UPT6 E9PFH7 1059 1067 MAPK8IP3 C-Jun-amino-terminal kinase-interacting protein 3 yes no 1 0.014139 23.042 By matching By MS/MS 1 1 20080000 11160000 8920300 694 34 720 1498;1499 1187 1187 1 NLEWIAGGTWTPSALK SSFKEAVKNLEWIAGG TWTPSALKFAYDRLIK K N L L K F 2 0 1 0 0 0 1 2 0 1 2 1 0 0 1 1 2 2 0 0 0 0 16 0 1742.8992 P12110 P12110 693 708 COL6A2 Collagen alpha-2(VI) chain yes yes 2 4.5137E-63 152.38 By MS/MS By MS/MS 1 1 9968500 4643000 5325500 695 520 721 1500;1501 1188;1189 1188 2 NLFLNHSENATAK QWLLTTAKNLFLNHSE HSENATAKDIAPTLTL K N L A K D 2 0 3 0 0 0 1 0 1 0 2 1 0 1 0 1 1 0 0 0 0 0 13 0 1457.7263 A0A087WU08;A0A0C4DGL8;J3QLC9;J3QR68;H0Y300;P00738;A0A0A0MRD9;P00739;H3BS21 A0A087WU08 78 90 HP;HPR Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain;Haptoglobin-related protein yes no 2 0.010555 41.54 By MS/MS 1 100760 100760 0 696 17 722 1502 1190 1190 3;4 1 NLNNSNLFSPVNR SIKKLVLKNLNNSNLF NLFSPVNRDSENLASP K N L N R D 0 1 5 0 0 0 0 0 0 0 2 0 0 1 1 2 0 0 0 1 0 0 13 0 1487.7481 P52948;H0YEN4 P52948 604 616 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 2 0.0070631 76.228 By matching By MS/MS 1 1 1429300 510530 918780 697 571 723 1503;1504 1191 1191 441 1 NLPGWQQDIDAR N L A R 1 1 1 2 0 2 0 1 0 1 1 0 0 0 1 0 0 1 0 0 0 0 12 0 1411.6844 REV__A0A087WVH4 yes no 1 0.014939 42.348 By MS/MS By matching 2 1 3568700 2695000 873750 + 698 801 724 1505;1506;1507 1192 1192 117 1 NLVWNAGALHYSDEVEIIQGLTR DRYYRCDRNLVWNAGA EIIQGLTRMPGGRDAL R N L T R M 2 1 2 1 0 1 2 2 1 2 3 0 0 0 0 1 1 1 1 2 0 0 23 0 2597.3238 A0A087X0S5;P12109 A0A087X0S5 83 105 COL6A1 Collagen alpha-1(VI) chain yes no 3 1.2443E-37 132.76 By MS/MS By MS/MS 1 1 68074000 22941000 45133000 699 43 725 1508;1509 1193;1194 1193 2 NLYSGDYYR IADFGMSRNLYSGDYY LYSGDYYRIQGRAVLP R N L Y R I 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 3 0 0 0 9 0 1149.5091 Q16832 Q16832 734 742 DDR2 Discoidin domain-containing receptor 2 yes yes 2 0.0096803 50.04 By MS/MS 1 171020 171020 0 700 632 726 1510 1195 1195 489;937 1 NNLEVEDEEGSLFVGVDTIHVHK TYRVAVGKNNLEVEDE VDTIHVHKRWNALLLR K N N H K R 0 0 2 2 0 0 4 2 2 1 2 1 0 1 0 1 1 0 0 4 0 0 23 0 2579.2504 Q99895 Q99895 89 111 CTRC Chymotrypsin-C yes yes 3;4 0.0042924 43.799 By MS/MS By MS/MS 1 2 1388500 596880 791580 701 731 727 1511;1512;1513 1196;1197;1198;1199 1197 4 NNSFTAPSTVGKR TLQNHYYRNNSFTAPS APSTVGKRNLSPSQEE R N N K R N 1 1 2 0 0 0 0 1 0 0 0 1 0 1 1 2 2 0 0 1 0 0 13 1 1377.7001 O95453 O95453 555 567 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.0021728 67.136 By MS/MS By matching 1 1 699500 382880 316620 702 469 728 1514;1515 1200 1200 380 1 NQILNLTTDNANILLQIDNAR YKTIDDLKNQILNLTT LLQIDNARLAADDFRL K N Q A R L 2 1 5 2 0 2 0 0 0 3 4 0 0 0 0 0 2 0 0 0 0 0 21 0 2366.2554 CON__P13645;P13645 CON__P13645 208 228 KRT10 Keratin, type I cytoskeletal 10 yes no 3 0.00026862 68.291 By MS/MS 1 6923000 0 6923000 + 703 203 729 1516 1201 1201 1 NQKPSQVNGAPGSPTEPAGQK KSPKLQKKNQKPSQVN PTEPAGQKQHQKALPK K N Q Q K Q 2 0 2 0 0 3 1 3 0 0 0 2 0 0 4 2 1 0 0 1 0 0 21 1 2091.0345 Q9BQG0;I3L1L3 Q9BQG0 1255 1275 MYBBP1A Myb-binding protein 1A yes no 3 0.00071112 62.648 By MS/MS By MS/MS 3 2 7569000 3399500 4169600 704 733 730;731 1517;1518;1519;1520;1521 1202;1203;1204;1205;1206 1206 237 585 5 NQLGTGYYLTLVK VGSSLFLKNQLGTGYY GYYLTLVKKDVESSLS K N Q V K K 0 0 1 0 0 1 0 2 0 0 3 1 0 0 0 0 2 0 2 1 0 0 13 0 1468.7926 O95477 O95477 1120 1132 ABCA1 ATP-binding cassette sub-family A member 1 yes yes 2 0.012015 41.399 By matching By MS/MS 1 1 848780 387690 461090 705 470 732 1522;1523 1207 1207 64;203 782;783 1 NQTLNSSGTVESALNYSR ________________ ESALNYSRGSTVHTAY M N Q S R G 1 1 3 0 0 1 1 1 0 0 2 0 0 0 0 4 2 0 1 1 0 0 18 0 1939.9235 Q8TDS7 Q8TDS7 2 19 MRGPRD Mas-related G-protein coupled receptor member D yes yes 2 0.012031 43.799 By MS/MS 1 0 0 0 706 702 733 1524 1208 1208 100;101;231 553;554;555 1 NRALEDITASIAMAVIQQK RKTSTVLKNRALEDIT AMAVIQQKMDRHMEVC K N R Q K M 4 1 1 1 0 2 1 0 0 3 1 1 1 0 0 1 1 0 0 1 0 0 19 1 2071.1096 I3L2C7;P57678 I3L2C7 385 403 GEMIN4 Gem-associated protein 4 yes no 3 0.011653 43.297 By MS/MS 1 0 0 0 707 401 734 1525 1209 1209 193;194 42 313;772 1 NSATFKSFEDR SRKLGDMRNSATFKSF TFKSFEDRVGTIKSKV R N S D R V 1 1 1 1 0 0 1 0 0 0 0 1 0 2 0 2 1 0 0 0 0 0 11 1 1300.6048 O43399 O43399 160 170 TPD52L2 Tumor protein D54 yes yes 2 8.3688E-07 124.42 By matching By MS/MS 1 1 5352200 2419400 2932800 708 447 735 1526;1527 1210 1210 359;360 1 NSITLTNLTPGTEYVVSIVALNGR EDRVPHSRNSITLTNL SIVALNGREESPLLIG R N S G R E 1 1 3 0 0 0 1 2 0 2 3 0 0 0 1 2 4 0 1 3 0 0 24 0 2531.3595 P02751;H0Y7Z1 P02751 1411 1434 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 2.224E-17 94.359 By MS/MS By MS/MS 1 1 17082000 7535600 9545900 709 485 736 1528;1529 1211;1212;1213 1212 72 3 NSITLVSEQDR HMKYGLCKNSITLVSE TLVSEQDRVPKCPKSN K N S D R V 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 2 1 0 0 1 0 0 11 0 1260.631 Q32MQ0 Q32MQ0 51 61 ZNF750 Zinc finger protein 750 yes yes 1 0.010801 40.725 By matching By MS/MS 1 1 9755900 6239100 3516800 710 634 737 1530;1531 1214 1214 491;820 1 NSQEDSEDSEDKDVK KNKRRSGKNSQEDSED DSEDKDVKTKKDDSHS K N S V K T 0 0 1 4 0 1 3 0 0 0 0 2 0 0 0 3 0 0 0 1 0 0 15 1 1723.702 Q9H1E3 Q9H1E3 53 67 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 0.0012306 72.898 By MS/MS By MS/MS 1 3 0 0 0 711 745 738 1532;1533;1534;1535 1215;1216;1217;1218 1218 601;602 4 NSYPQKVQGGHSPDDHRVR IPYKEHERNSYPQKVQ SPDDHRVRGSGKGGKP R N S V R G 0 2 1 2 0 2 0 2 2 0 0 1 0 0 2 2 0 0 1 2 0 0 19 2 2176.0522 A2AJT9 A2AJT9 128 146 CXorf23 Uncharacterized protein CXorf23 yes yes 2 0.0079268 50.188 By MS/MS 1 17234000 17234000 0 712 120 739 1536 1219 1219 142 85 1 NTDFVPPQSKLLR NSCSTPMRNTDFVPPQ PPQSKLLREDKNHNMY R N T L R E 0 1 1 1 0 1 0 0 0 0 2 1 0 1 2 1 1 0 0 1 0 0 13 1 1513.8253 H0YME6 H0YME6 255 267 KIF23 Kinesin-like protein yes yes 3 0.0039532 57.175 By MS/MS By matching 1 1 741450 401290 340170 713 370 740 1537;1538 1220 1220 291;764 1 NTEESSSPVRK VDTEPQKRNTEESSSP ESSSPVRKESSRGRHR R N T R K E 0 1 1 0 0 0 2 0 0 0 0 1 0 0 1 3 1 0 0 1 0 0 11 1 1232.5997 Q5T200 Q5T200 104 114 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 0.0021932 93.345 By matching By MS/MS 1 1 1730500 828020 902440 714 646 741 1539;1540 1221 1221 502 1 NTFAEVTGLSPGVTYYFK GQRLPISRNTFAEVTG PGVTYYFKVFAVSHGR R N T F K V 1 0 1 0 0 0 1 2 0 0 1 1 0 2 1 1 3 0 2 2 0 0 18 0 1992.9833 P02751 P02751 959 976 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 1.4036E-05 89.466 By MS/MS By MS/MS 1 1 8320900 4816800 3504100 715 485 742 1541;1542 1222;1223 1223 2 NTLSLVNDFIIR NQTHAIYKNTLSLVND LVNDFIIRDTILNINF K N T I R D 0 1 2 1 0 0 0 0 0 2 2 0 0 1 0 1 1 0 0 1 0 0 12 0 1403.7773 P55259 P55259 299 310 GP2 Pancreatic secretory granule membrane major glycoprotein GP2 yes yes 2 0.012928 58.592 By MS/MS 1 935010 0 935010 716 574 743 1543 1224 1224 1 NTYEVLDFLGRGTFGQVVK HEVLCSMKNTYEVLDF GTFGQVVKCWKRGTNE K N T V K C 0 1 1 1 0 1 1 3 0 0 2 1 0 2 0 0 2 0 1 3 0 0 19 1 2142.111 Q9H422 Q9H422 195 213 HIPK3 Homeodomain-interacting protein kinase 3 yes yes 3 0.013524 40.012 By MS/MS 1 0 0 0 717 751 744 1544 1225 1225 109;243 848;948 1 NVAFVIDISGSMAGR QGLPVVPKNVAFVIDI ISGSMAGRKLEQTKEA K N V G R K 2 1 1 1 0 0 0 2 0 2 0 0 1 1 0 2 0 0 0 2 0 0 15 0 1535.7766 A0A087WW43;E7ET33;Q06033 A0A087WW43 284 298 ITIH3 Inter-alpha-trypsin inhibitor heavy chain H3 yes no 2 0.0098805 47.288 By MS/MS 1 0 0 0 718 26 745 1545 1226 1226 4 1 NVLIVEDIIDTGK DLSTLTGKNVLIVEDI EDIIDTGKTMQTLLSL K N V G K T 0 0 1 2 0 0 1 1 0 3 1 1 0 0 0 0 1 0 0 2 0 0 13 0 1427.7872 P00492 P00492 129 141 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.0039152 69.979 By MS/MS By MS/MS 1 1 1993700 960530 1033200 719 476 746 1546;1547 1227;1228 1228 2 NVQALEIELQSQLALK SEITELRRNVQALEIE LQSQLALKQSLEASLA R N V L K Q 2 0 1 0 0 3 2 0 0 1 4 1 0 0 0 1 0 0 0 1 0 0 16 0 1796.0044 CON__P13645;P13645 CON__P13645 371 386 KRT10 Keratin, type I cytoskeletal 10 yes no 3 1.8837E-16 99.069 By MS/MS 1 816890 816890 0 + 720 203 747 1548 1229 1229 1 NVSSFPDDATSPLQENR DDQMLKRRNVSSFPDD TSPLQENRNNQGTVNW R N V N R N 1 1 2 2 0 1 1 0 0 0 1 0 0 1 2 3 1 0 0 1 0 0 17 0 1875.8599 J3QLL0;J3KS65;P52292 J3QLL0 52 68 KPNA2 Importin subunit alpha-1 yes no 2 0.003415 62.377 By MS/MS By MS/MS 1 1 2792600 1345400 1447200 721 411 748 1549;1550 1230;1231 1231 321;322;774 2 PCSEETPAISPSK ________________ TPAISPSKRARPAEVG M P C S K R 1 0 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 13 0 1401.6446 H0YNJ9 H0YNJ9 2 14 DUT yes yes 2 0.0044658 78.985 By MS/MS By matching 1 1 2334600 1080400 1254200 722 373 749 1551;1552 1232 1232 292 1 PCSEETPAISPSKR ________________ PAISPSKRARPAEVGG M P C K R A 1 1 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 14 1 1557.7457 H0YNJ9 H0YNJ9 2 15 DUT yes yes 2;3 0 244.23 By MS/MS By MS/MS 2 2 48924000 28648000 20276000 723 373 750 1553;1554;1555;1556 1233;1234;1235;1236;1237;1238 1238 292 6 PFIYQEVIDLGGEPIK NWFPAGSKPFIYQEVI DLGGEPIKSSDYFGNG K P F I K S 0 0 0 1 0 1 2 2 0 3 1 1 0 1 2 0 0 0 1 1 0 0 16 0 1816.9611 P19961;P04746;P04745 P19961 243 258 AMY2B;AMY2A;AMY1A Alpha-amylase 2B;Pancreatic alpha-amylase;Alpha-amylase 1 yes no 2 5.8025E-39 141.58 By MS/MS 1 3253100 0 3253100 724 491 751 1557 1239 1239 1 PGFVIDIYTGLPVDIDECR ATLCGSQRPGFVIDIY PVDIDECREIPGVCEN R P G C R E 0 1 0 3 1 0 1 2 0 3 1 0 0 1 2 0 1 0 1 2 0 0 19 0 2178.0667 H0YND0;P35555 H0YND0 189 207 FBN1 Fibrillin-1 yes no 2 0.0032031 63.181 By matching By MS/MS 1 1 10394000 5900900 4493500 725 372 752 1558;1559 1240 1240 1 PGVTEATITGLEPGTEYTIYVIALK REVVPRPRPGVTEATI TIYVIALKNNQKSEPL R P G L K N 2 0 0 0 0 0 3 3 0 3 2 1 0 0 2 0 5 0 2 2 0 0 25 0 2635.3997 P02751;H0Y7Z1;H0Y4K8 P02751 1953 1977 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 1.2766E-12 83.436 By MS/MS By MS/MS 1 1 7953900 1988700 5965200 726 485 753 1560;1561 1241;1242 1242 2 PLLVDVDLQYPQDAVLALTQNHHK GFYSQVAKPLLVDVDL ALTQNHHKQYYEGSEI K P L H K Q 2 0 1 3 0 3 0 0 2 0 5 1 0 0 2 0 1 0 1 3 0 0 24 0 2726.4392 P19827;H7C0N0 P19827 478 501 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 4 0.00058895 53.304 By MS/MS By MS/MS 1 1 3798200 1408500 2389800 727 534 754 1562;1563 1243;1244;1245 1245 3 PLQKGQTAYQR VTCANCKKPLQKGQTA KGQTAYQRKGSAHLFC K P L Q R K 1 1 0 0 0 3 0 1 0 0 1 1 0 0 1 0 1 0 1 0 0 0 11 1 1288.6888 A0A087X151;H0YH25;Q9UJ78;Q9UBW7 A0A087X151 250 260 ZMYM2;ZMYM5 Zinc finger MYM-type protein 5;Zinc finger MYM-type protein 2 yes no 2 0.014477 40.002 By MS/MS 1 153780 0 153780 728 44 755 1564 1246 1246 125;126 1 PLSQLWQNRPPNFEAEK EETEAWAKPLSQLWQN PPNFEAEKEFNETMAQ K P L E K E 1 1 2 0 0 2 2 0 0 0 2 1 0 1 3 1 0 1 0 0 0 0 17 1 2053.0381 O75164 O75164 639 655 KDM4A Lysine-specific demethylase 4A yes yes 2 0.0083265 49.632 By MS/MS 1 0 0 0 729 455 756 1565 1247 1247 61;201 1 PLSSLTPLIIAAKEAIK HPFLKLAKPLSSLTPL IAAKEAIKNSSR____ K P L I K N 3 0 0 0 0 0 1 0 0 3 3 2 0 0 2 2 1 0 0 0 0 0 17 1 1764.0761 A0A087X294;O75914 A0A087X294 523 539 PAK3 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 3 yes no 3 0.014644 21.233 By MS/MS By matching 1 1 1293200 752290 540940 730 49 757 1566;1567 1248 1248 0 PNLQTFNTILK HMVAQKVKPNLQTFNT QTFNTILKCLRRFHVF K P N L K C 0 0 2 0 0 1 0 0 0 1 2 1 0 1 1 0 2 0 0 0 0 0 11 0 1287.7187 Q96EY7 Q96EY7 330 340 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 2 0.0065926 54.772 By matching By MS/MS 1 1 2115900 1058100 1057800 731 719 758 1568;1569 1249 1249 103;233 839 1 PNSIQTRGQLLCVR IIFVRAKRPNSIQTRG RGQLLCVREFTQFLTP R P N V R E 0 2 1 0 1 2 0 1 0 1 2 0 0 0 1 1 1 0 0 1 0 0 14 1 1640.8781 A0A087WTF0;A2A3K4 A0A087WTF0 279 292 PTPDC1 Protein tyrosine phosphatase domain-containing protein 1 yes no 2 0.011113 46.88 By MS/MS 1 0 0 0 732 11 759 1570 1250 1250 2;119 672 1 PQGTPLGDSRSHGVRESPK KPEEGPERPQGTPLGD HGVRESPKKWQPQRQK R P Q P K K 0 2 0 1 0 1 1 3 1 0 1 1 0 0 3 3 1 0 0 1 0 0 19 2 2004.0137 A0A0J9YY54 A0A0J9YY54 628 646 yes yes 3 0.0080673 40.52 By MS/MS By matching 1 1 1892100 597880 1294200 733 90 760 1571;1572 1251 1251 61 0 PQLGSQVDLGRVKMEK RRGSSTERPQLGSQVD LGRVKMEKVDGDVVFN R P Q E K V 0 1 0 1 0 2 1 2 0 0 2 2 1 0 1 1 0 0 0 2 0 0 16 2 1783.9615 H7C4B2;A0A075B6Q3;Q5H9F3 H7C4B2 474 489 BCORL1 BCL-6 corepressor-like protein 1 yes no 2 0.011855 42.809 By MS/MS 1 0 0 0 734 3 761 1573 1252 1252 118 0 1 PRPGVTEATITGLEPGTEYTIYVIALK PPREVVPRPRPGVTEA TIYVIALKNNQKSEPL R P R L K N 2 1 0 0 0 0 3 3 0 3 2 1 0 0 3 0 5 0 2 2 0 0 27 1 2888.5535 P02751;H0Y7Z1;H0Y4K8 P02751 1951 1977 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 1.0148E-24 94.072 By MS/MS By MS/MS 1 1 35170000 14457000 20713000 735 485 762 1574;1575 1253;1254 1253 2 PRSLRFTWSMK KDENKEAKPRSLRFTW LRFTWSMKTTSSMDPG K P R M K T 0 2 0 0 0 0 0 0 0 0 1 1 1 1 1 2 1 1 0 0 0 0 11 2 1407.7445 H0YKP9;A2SY06;H0YIY6;A0A0A0MST9;E7ETY4;A0A0A0MQR8;A0A0A0MSZ1;A0A0A0MT23;J3KNR0;E9PC69;B4DIB3;A0A087X0I6;P27448;Q7KZI7;Q9P0L2 H0YKP9 124 134 MARK3;MARK2;MARK1 MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK2;Serine/threonine-protein kinase MARK1 yes no 2 0.013973 43.761 By MS/MS 1 231150 0 231150 736 40 763 1576 1255 1255 23;24 1 PTQSVQSQALHYR GDPRPEPRPTQSVQSQ QSQALHYRNRERFATI R P T Y R N 1 1 0 0 0 3 0 0 1 0 1 0 0 0 1 2 1 0 1 1 0 0 13 0 1513.7637 Q9H2K8 Q9H2K8 418 430 TAOK3 Serine/threonine-protein kinase TAO3 yes yes 3 0.013752 41.401 By MS/MS 1 0 0 0 737 749 764 1577 1256 1256 241;242 604;847 1 PTSSPAKGPPQK LGNILQAKPTSSPAKG PAKGPPQKAGPVAVQV K P T Q K A 1 0 0 0 0 1 0 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 12 1 1193.6404 J3KQ96;E7ETY2;Q13428 J3KQ96 580 591 TCOF1 Treacle protein yes no 3 0.010902 54.486 By matching By MS/MS 1 1 1269300 468050 801260 738 238 765 1578;1579 1257 1257 182 1 PVDIVFLLDGSER SVAQCTQRPVDIVFLL FLLDGSERLGEQNFHK R P V E R L 0 1 0 2 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 2 0 0 13 0 1458.7718 P12110 P12110 831 843 COL6A2 Collagen alpha-2(VI) chain yes yes 2 1.8818E-12 128.01 By MS/MS By MS/MS 1 1 11301000 5387300 5913900 739 520 766 1580;1581 1258;1259 1258 2 PVSSAASVYAGAGGSGSR QAPSYGARPVSSAASV GAGGSGSRISVSRSTS R P V S R I 4 1 0 0 0 0 0 4 0 0 0 0 0 0 1 5 0 0 1 2 0 0 18 0 1579.759 F8VZY9;P05783 F8VZY9 28 45 KRT18 Keratin, type I cytoskeletal 18 yes no 3 5.657E-08 79.514 By MS/MS By matching 1 1 1076600 591000 485590 740 310 767 1582;1583 1260;1261 1260 2 PWKSVSEINPTTQMK TSPKCPGRPWKSVSEI INPTTQMKESYYFDLT R P W M K E 0 0 1 0 0 1 1 0 0 1 0 2 1 0 2 2 2 1 0 1 0 0 15 1 1744.8818 P01042 P01042 618 632 KNG1 Kininogen-1;Kininogen-1 heavy chain;T-kinin;Bradykinin;Lysyl-bradykinin;Kininogen-1 light chain;Low molecular weight growth-promoting factor yes yes 2 0.012789 40.727 By MS/MS By matching 1 1 485880 268500 217380 741 480 768 1584;1585 1262 1262 69 383 1 PYQNKNAINNGVR ________________ NAINNGVRISGRGFCV K P Y V R I 1 1 4 0 0 1 0 1 0 1 0 1 0 0 1 0 0 0 1 1 0 0 13 1 1486.7641 D6RD58;D6RGX8;E5RHW6;O14960 D6RD58 8 20 LECT2 Leukocyte cell-derived chemotaxin-2 yes no 2 0.013826 46.891 By MS/MS By matching 1 1 749510 356690 392810 742 214 769 1586;1587 1263 1263 27;28 1 QADSEMTGYVVTR ILDFGLARQADSEMTG MTGYVVTRWYRAPEVI R Q A T R W 1 1 0 1 0 1 1 1 0 0 0 0 1 0 0 1 2 0 1 2 0 0 13 0 1455.6664 B5MDL5;P53778 B5MDL5 87 99 MAPK12 Mitogen-activated protein kinase 12 yes no 2 0.0012199 78.548 By MS/MS By MS/MS 1 1 1046400 412810 633550 743 158 770 1588;1589 1264;1265 1264 877 2 QALSDLMIKPVQR SMRENKEKQALSDLMI LMIKPVQRIPRYELLV K Q A Q R I 1 1 0 1 0 2 0 0 0 1 2 1 1 0 1 1 0 0 0 1 0 0 13 1 1497.8337 Q96PE2 Q96PE2 1200 1212 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes yes 2 0.0013248 73.067 By MS/MS 1 4172200 4172200 0 744 724 771 1590 1266 1266 235;236 93 1 QASTDAGTAGALTPQHVR PEPKSHSRQASTDAGT ALTPQHVRAHSSPASL R Q A V R A 4 1 0 1 0 2 0 2 1 0 1 0 0 0 1 1 3 0 0 1 0 0 18 0 1779.8864 P46937 P46937 107 124 YAP1 Transcriptional coactivator YAP1 yes yes 3 0.010537 43.752 By MS/MS By matching 1 1 1096300 669200 427150 745 559 772 1591;1592 1267 1267 429;800 1 QCALKNTSLSK VHLYLSRKQCALKNTS LKNTSLSKFQTSHICK K Q C S K F 1 0 1 0 1 1 0 0 0 0 2 2 0 0 0 2 1 0 0 0 0 0 11 1 1248.6496 Q6AWC8 Q6AWC8 25 35 Putative uncharacterized protein LOC100129027 yes yes 2 0.012155 45.022 By MS/MS By matching 1 1 8454800 3299700 5155100 746 654 773 1593;1594 1268 1268 90;220 510 1 QDNMRLQEESQTATAQLR QAEVQHLRQDNMRLQE QTATAQLRKFTEWFFT R Q D L R K 2 2 1 1 0 4 2 0 0 0 2 0 1 0 0 1 2 0 0 0 0 0 18 1 2118.0124 Q9P2F8 Q9P2F8 1691 1708 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 3 0.0077607 46.324 By MS/MS 1 250050 250050 0 747 772 774 1595 1269 1269 248 1 QDVYGPQPQVR EGYRAPSRQDVYGPQP YGPQPQVRVGGSSVDL R Q D V R V 0 1 0 1 0 3 0 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 11 0 1285.6415 C9JZR2;O60716;E9PRE2 C9JZR2 254 264 CTNND1 Catenin delta-1 yes no 2 3.1582E-33 143.7 By MS/MS By MS/MS 1 1 7278100 3284300 3993800 748 195 775 1596;1597 1270;1271 1270 883 2 QEPSQGTTTFAVTSILR KYLTWASRQEPSQGTT FAVTSILRVAAEDWKK R Q E L R V 1 1 0 0 0 2 1 1 0 1 1 0 0 1 1 2 4 0 0 1 0 0 17 0 1834.9425 A0A0G2JMB2;P01876 A0A0G2JMB2 270 286 IGHA1 Ig alpha-1 chain C region yes no 2 0.010345 53.754 By MS/MS By MS/MS 1 1 2246400 796780 1449600 749 86 776 1598;1599 1272;1273 1273 2 QERLSPEVAPPAHR LPAGVVVKQERLSPEV EVAPPAHRRPDHSGGS K Q E H R R 2 2 0 0 0 1 2 0 1 0 1 0 0 0 3 1 0 0 0 1 0 0 14 1 1585.8325 Q8TAD8 Q8TAD8 31 44 SNIP1 Smad nuclear-interacting protein 1 yes yes 3 8.3133E-06 102.29 By MS/MS 1 793780 0 793780 750 701 777 1600 1274 1274 552 1 QEVAPVQYNIVEQNK WKPLGQQKQEVAPVQY YNIVEQNKLNKDYRAN K Q E N K L 1 0 2 0 0 3 2 0 0 1 0 1 0 0 1 0 0 0 1 3 0 0 15 0 1757.8948 A0A087WZ85;A0A0A0MSX4;A0A087WTM1;Q9Y6N7 A0A087WZ85 981 995 ROBO1 Roundabout homolog 1 yes no 2 0.013351 40.767 By matching By MS/MS 1 1 922050 459290 462760 751 12 778 1601;1602 1275 1275 862 1 QFQEAIIVFQEEFK SATGESEKQFQEAIIV IVFQEEFKCCGLVNGA K Q F F K C 1 0 0 0 0 3 3 0 0 2 0 1 0 3 0 0 0 0 0 1 0 0 14 0 1754.8879 P19075 P19075 137 150 TSPAN8 Tetraspanin-8 yes yes 2 3.4332E-143 174.23 By MS/MS By MS/MS 1 1 10406000 6770400 3636000 752 530 779 1603;1604 1276;1277 1277 2 QGAQFKEYRPETGSWVFK RLEAVSRKQGAQFKEY ETGSWVFKVSHFSKYG K Q G F K V 1 1 0 0 0 2 2 2 0 0 0 2 0 2 1 1 1 1 1 1 0 0 18 2 2157.0643 P52948 P52948 859 876 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 3 0.0122 41.412 By MS/MS 1 0 0 0 753 571 780 1605 1278 1278 209;210 804;929 1 QGSPVAAGAPAK FGSRGQPRQGSPVAAG VAAGAPAKQQQVDIPL R Q G A K Q 4 0 0 0 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 12 0 1052.5615 Q9NZI8 Q9NZI8 179 190 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 1.9441E-301 204.32 By MS/MS By MS/MS 1 1 14755000 8045700 6709200 754 771 781 1606;1607 1279;1280;1281;1282;1283;1284 1283 630 6 QGSPVAAGAPAKQQQVDIPLR FGSRGQPRQGSPVAAG QQVDIPLRLLVPTQYV R Q G L R L 4 1 0 1 0 4 0 2 0 1 1 1 0 0 3 1 0 0 0 2 0 0 21 1 2130.1546 Q9NZI8 Q9NZI8 179 199 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 3 0.0031765 57.414 By MS/MS By matching 1 1 12126000 6531300 5594900 755 771 782 1608;1609 1285 1285 630 1 QGSQPRGQQSAEEENFK ________________ SAEEENFKKPTRSNMQ K Q G F K K 1 1 1 0 0 4 3 2 0 0 0 1 0 1 1 2 0 0 0 0 0 0 17 1 1918.8769 Q5JXX6;Q5JXX1;Q5JXX2;Q15014 Q5JXX6 6 22 MORF4L2 Mortality factor 4-like protein 2 yes no 3 0.0045208 45.863 By MS/MS 1 243710 0 243710 756 622 783 1610 1286 1286 213;214;215;216 483 0 QHVVSVEEALLATGQWK LSLTVQGKQHVVSVEE LLATGQWKSITLFVQE K Q H W K S 2 0 0 0 0 2 2 1 1 0 2 1 0 0 0 1 1 1 0 3 0 0 17 0 1893.9949 CON__Q28194;P07996 CON__Q28194 138 154 THBS1 Thrombospondin-1 yes no 3 0.0098443 46.249 By MS/MS 1 0 0 0 + 757 205 784 1611 1287 1287 1 QILIACSPVSSVR ILRVTRRRQILIACSP CSPVSSVRKKPKVTPT R Q I V R K 1 1 0 0 1 1 0 0 0 2 1 0 0 0 1 3 0 0 0 2 0 0 13 0 1428.7759 E9PRB3;J3KP30;Q5QJE6 E9PRB3 118 130 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 0.0032112 92.269 By MS/MS By MS/MS 1 1 2565100 829340 1735700 758 277 785 1612;1613 1288;1289 1289 219 2 QITETKATQK IGSGNSKRQITETKAT TETKATQKLPVSRHTL R Q I Q K L 1 0 0 0 0 2 1 0 0 1 0 2 0 0 0 0 3 0 0 0 0 0 10 1 1146.6245 C9JLG4;C9J164;C9K0J5;Q70E73 C9JLG4 111 120 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 2 0.007454 73.219 By MS/MS By matching 1 1 2027900 887990 1139900 759 175 786 1614;1615 1290 1290 153 715;716 1 QITVNDLPVGR IDDKGILRQITVNDLP VNDLPVGRSVDETLRL R Q I G R S 0 1 1 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1210.667 A0A0A0MRQ5;A0A0A0MSI0;P32119;Q06830 A0A0A0MRQ5 39 49 PRDX1;PRDX2 Peroxiredoxin-2;Peroxiredoxin-1 yes no 2 0.0025887 84.213 By matching By MS/MS 1 1 611680 219070 392610 760 58 787 1616;1617 1291 1291 1 QKKAHLMEIQVNGGTVAEK QMRLLPLRQKKAHLME NGGTVAEKLDWARERL R Q K E K L 2 0 1 0 0 2 2 2 1 1 1 3 1 0 0 0 1 0 0 2 0 0 19 2 2080.1099 H7C3M2;B5MCW2;H7C422;G5E9G0;P39023 H7C3M2 207 225 RPL3 60S ribosomal protein L3 yes no 2 1.9747E-07 92.952 By MS/MS By MS/MS 2 1 1631100000 589020000 1042100000 761 156 788 1618;1619;1620 1292;1293;1294 1294 146;147 712 3 QKPEVDQQIVIYTK TQCGYDARQKPEVDQQ QQIVIYTKGCVPQFEK R Q K T K G 0 0 0 1 0 3 1 0 0 2 0 2 0 0 1 0 1 0 1 2 0 0 14 1 1687.9145 B7Z317;P62079 B7Z317 135 148 TSPAN5 Tetraspanin;Tetraspanin-5 yes no 2 0.010814 42.336 By MS/MS By matching 1 1 1828200 858630 969530 762 160 789 1621;1622 1295 1295 148;149;150 1 QKVNLESNK LIEDLKFRQKVNLESN KVNLESNKSFSEMLQN R Q K N K S 0 0 2 0 0 1 1 0 0 0 1 2 0 0 0 1 0 0 0 1 0 0 9 1 1058.572 Q9NXG0 Q9NXG0 1157 1165 CNTLN Centlein yes yes 2 0.011791 49.06 By MS/MS By matching 1 1 2247800 882410 1365300 763 767 790 1623;1624 1296 1296 111;247 627 1 QLEDEEGRKAEK QQEEDFRKQLEDEEGR EEGRKAEKENTTAELT K Q L E K E 1 1 0 1 0 1 4 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 12 2 1430.7001 O75330 O75330 554 565 HMMR Hyaluronan mediated motility receptor yes yes 2 0.0074086 55.112 By MS/MS By matching 1 1 11008000 4782100 6225500 764 456 791 1625;1626 1297 1297 1 QLEEPGAGTPSPVR SGSGMPSRQLEEPGAG AGTPSPVRLHALAGFQ R Q L V R L 1 1 0 0 0 1 2 2 0 0 1 0 0 0 3 1 1 0 0 1 0 0 14 0 1436.726 Q63ZY6;Q96P11 Q63ZY6 133 146 NSUN5P2;NSUN5 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 2 0.0085129 61.657 By matching By MS/MS 1 1 628150 310700 317460 765 653 792 1627;1628 1298 1298 509 1 QLESLIRLTEAR NSSPITTRQLESLIRL LIRLTEARARLELREE R Q L A R A 1 2 0 0 0 1 2 0 0 1 3 0 0 0 0 1 1 0 0 0 0 0 12 1 1427.8096 Q9UJA3 Q9UJA3 712 723 MCM8 DNA helicase MCM8 yes yes 2 0.0036534 79.148 By matching By MS/MS 1 1 10624000 4252900 6371200 766 775 793 1629;1630 1299 1299 1 QLSLEGSGLGVEDLK STKYDVFRQLSLEGSG GLGVEDLKDNTPSGKS R Q L L K D 0 0 0 1 0 1 2 3 0 0 4 1 0 0 0 2 0 0 0 1 0 0 15 0 1543.8094 Q9UMZ2 Q9UMZ2 750 764 SYNRG Synergin gamma yes yes 2 0.011444 57.885 By matching By MS/MS 1 1 792870 307810 485060 767 784 794 1631;1632 1300 1300 639 1 QMSLCGTPEKSSYR NVSRQTSRQMSLCGTP TPEKSSYRQLSVSDRS R Q M Y R Q 0 1 0 0 1 1 1 1 0 0 1 1 1 0 1 3 1 0 1 0 0 0 14 1 1642.7443 Q9UPU5 Q9UPU5 1283 1296 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.011851 44.294 By MS/MS 1 0 0 0 768 785 795 1633 1301 1301 251 640;641;642;955 1 QNDTPKGPQPPTVSPIR FEKAAFQKQNDTPKGP PPTVSPIRSSRPPPAK K Q N I R S 0 1 1 1 0 2 0 1 0 1 0 1 0 0 5 1 2 0 0 1 0 0 17 1 1830.9588 P46087 P46087 773 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 3 0.0055133 55.546 By matching By MS/MS 1 1 646020 306650 339370 769 557 796 1634;1635 1302 1302 427 1 QNGSNDSDRYSDNEEDSKIELK SSSAENTRQNGSNDSD EDSKIELKLEKREPLK R Q N L K L 0 1 3 4 0 1 3 1 0 1 1 2 0 0 0 4 0 0 1 0 0 0 22 2 2542.1055 G5E972;P42167;H0YJH7 G5E972 174 195 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3;4 3.7808E-06 77.137 By MS/MS By matching 2 1 20687000 12149000 8538000 770 331 797;798 1636;1637;1638 1303;1304 1303 41;178 269;270 2 QNSDPTSENPPLPTR SHRVEMPRQNSDPTSE ENPPLPTRIEKFDRSS R Q N T R I 0 1 2 1 0 1 1 0 0 0 1 0 0 0 4 2 2 0 0 0 0 0 15 0 1651.7802 Q9UKE5 Q9UKE5 638 652 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.0032412 66.387 By MS/MS 1 949030 0 949030 771 780 799 1639 1305 1305 636 1 QPLLLSEDEEDTKR PVGGNYGKQPLLLSED EDEEDTKRVVRSAKDK K Q P K R V 0 1 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 14 1 1671.8315 H3BPE4;Q99613;B5ME19 H3BPE4 34 47 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 0.00013355 96.707 By MS/MS By MS/MS 2 2 14167000 6038100 8128400 772 159 800 1640;1641;1642;1643 1306;1307;1308;1309 1309 122 4 QPTPPFFGR GGFDGQARQPTPPFFG PTPPFFGRDRSPLRRS R Q P G R D 0 1 0 0 0 1 0 1 0 0 0 0 0 2 3 0 1 0 0 0 0 0 9 0 1045.5345 Q96PK6 Q96PK6 204 212 RBM14 RNA-binding protein 14 yes yes 2 0.0014075 125.71 By matching By MS/MS 1 1 3479300 1761400 1718000 773 725 801 1644;1645 1310 1310 840 1 QQFYHSVQDLSGGSR CVDMSTNRQQFYHSVQ QDLSGGSRQHEAPSNR R Q Q S R Q 0 1 0 1 0 3 0 2 1 0 1 0 0 1 0 3 0 0 1 1 0 0 15 0 1707.7965 P10398 P10398 152 166 ARAF Serine/threonine-protein kinase A-Raf yes yes 2 0.008945 45.257 By MS/MS By matching 1 1 865010 344330 520680 774 514 802 1646;1647 1311 1311 921 1 QQGQLCDVSIVVQGHIFR LQKLNQQRQQGQLCDV VVQGHIFRAHKAVLAA R Q Q F R A 0 1 0 1 1 4 0 2 1 2 1 0 0 1 0 1 0 0 0 3 0 0 18 0 2083.0633 Q5JU97;O43298 Q5JU97 28 45 ZBTB43 Zinc finger and BTB domain-containing protein 43 yes no 2 0.0075989 59.198 By MS/MS 1 13067000 13067000 0 775 446 803 1648 1312 1312 358 1 QSNASSDVEVEEK SSQQAATKQSNASSDV SDVEVEEKETSVSKED K Q S E K E 1 0 1 1 0 1 3 0 0 0 0 1 0 0 0 3 0 0 0 2 0 0 13 0 1420.6318 O75475 O75475 101 113 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 1.5571E-82 159.41 By MS/MS By MS/MS 2 2 4121200 1883400 2237800 776 457 804 1649;1650;1651;1652 1313;1314;1315 1314 368 3 QSPASPPPLGGGAPVR ASPSPTSRQSPASPPP LGGGAPVRTAKAERRH R Q S V R T 2 1 0 0 0 1 0 3 0 0 1 0 0 0 5 2 0 0 0 1 0 0 16 0 1486.7892 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1363 1378 SCRIB Protein scribble homolog yes no 2 3.0368E-14 109.79 By MS/MS By MS/MS 1 1 3209900 1514200 1695700 777 88 805 1653;1654 1316;1317 1316 59 2 QSVDKVTSPTKV SKRNLWEKQSVDKVTS KVTSPTKV________ K Q S K V - 0 0 0 1 0 1 0 0 0 0 0 2 0 0 1 2 2 0 0 3 0 0 12 2 1287.7034 E7EX44;Q05682 E7EX44 546 557 CALD1 Caldesmon yes no 2 0.007962 54.784 By MS/MS By matching 1 1 2913600 1507900 1405700 778 245 806 1655;1656 1318 1318 730 1 QTEKNKNNVK QAQTQTGKQTEKNKNN EKNKNNVKDN______ K Q T V K D 0 0 3 0 0 1 1 0 0 0 0 3 0 0 0 0 1 0 0 1 0 0 10 2 1201.6415 Q8N752 Q8N752 326 335 CSNK1A1L Casein kinase I isoform alpha-like yes yes 2 0.011758 55.37 By matching By MS/MS 1 1 409980 129150 280830 779 693 807 1657;1658 1319 1319 1 QTMSLPEKSHSQIK HSSWHSVKQTMSLPEK EKSHSQIKHRNLVTLV K Q T I K H 0 0 0 0 0 2 1 0 1 1 1 2 1 0 1 3 1 0 0 0 0 0 14 1 1612.8243 Q6ZQQ2 Q6ZQQ2 859 872 SPATA31D1 Spermatogenesis-associated protein 31D1 yes yes 2 0.010469 56.359 By matching By MS/MS 1 1 1626300 552750 1073600 780 670 808 1659;1660 1320 1320 223 830 1 QTQIFTTYSDNQPGVLIQVYEGER RNSTIPTKQTQIFTTY IQVYEGERAMTKDNNL K Q T E R A 0 1 1 1 0 4 2 2 0 2 1 0 0 1 1 1 3 0 2 2 0 0 24 0 2785.3559 V9GZ37;Q53FA3;A0A0G2JIW1;P34931;P0DMV9;P0DMV8 V9GZ37 259 282 HSPA1A;HSPA1L;HSPA1B Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 0.010682 35.98 By matching By MS/MS 1 1 4610600 2448900 2161700 781 83 809 1661;1662 1321 1321 1 QTQKDLEHAMLLRQHESMQELEFR VREELNKRQTQKDLEH SMQELEFRHLNTIQKM R Q T F R H 1 2 0 1 0 4 4 0 2 0 4 1 2 1 0 1 1 0 0 0 0 0 24 2 2996.4597 Q7L7X3 Q7L7X3 642 665 TAOK1 Serine/threonine-protein kinase TAO1 yes yes 2 0.014755 21.42 By MS/MS 1 16493000 0 16493000 782 675 810 1663 1322 1322 0 QTVMKWSKGK HPTDLNVRQTVMKWSK VMKWSKGKCKFCQRQF R Q T G K C 0 0 0 0 0 1 0 1 0 0 0 3 1 0 0 1 1 1 0 1 0 0 10 2 1191.6434 A0A1B0GWA0;Q8IZM8 A0A1B0GWA0 779 788 ZNF654 Zinc finger protein 654 yes no 2 0.010927 44.318 By MS/MS 1 849420 849420 0 783 113 811 1664 1323 1323 141 21 1 QVAEQGGDLSPAANR RIQVAQEKQVAEQGGD DLSPAANRSQKASQSR K Q V N R S 3 1 1 1 0 2 1 2 0 0 1 0 0 0 1 1 0 0 0 1 0 0 15 0 1511.7328 O94804 O94804 429 443 STK10 Serine/threonine-protein kinase 10 yes yes 2 0.012058 57.288 By MS/MS 1 560110 0 560110 784 461 812 1665 1324 1324 372 1 QVLLNMRKYR KGDDINIKQVLLNMRK LLNMRKYRMGLIQTPD K Q V Y R M 0 2 1 0 0 1 0 0 0 0 2 1 1 0 0 0 0 0 1 1 0 0 10 2 1319.7496 K7EQG9;P17706 K7EQG9 217 226 PTPN2 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 yes no 2 0.010711 42.109 By matching By MS/MS 1 1 397430 201500 195930 785 426 813 1666;1667 1325 1325 55;197 911 1 QVLQSTQSPR EEELKRQRQVLQSTQS LQSTQSPRTKNAPSLP R Q V P R T 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 10 0 1142.6044 Q9Y2D5 Q9Y2D5 741 750 AKAP2 A-kinase anchor protein 2 yes yes 2 0.0047899 89.08 By matching By MS/MS 1 1 1117100 492580 624560 786 790 814 1668;1669 1326 1326 652 1 QVQEFLKDGDDVIIIGVFK SKEILTLKQVQEFLKD VIIIGVFKGESDPAYQ K Q V F K G 0 0 0 3 0 2 1 2 0 3 1 2 0 2 0 0 0 0 0 3 0 0 19 1 2162.1623 P13667 P13667 295 313 PDIA4 Protein disulfide-isomerase A4 yes yes 3 0.0059828 44.539 By MS/MS By matching 1 1 2692800 1187500 1505200 787 521 815 1670;1671 1327 1327 0 QVSSLQREPFTIAQGK ________________ PFTIAQGKGQKLCEIE M Q V G K G 1 1 0 0 0 3 1 1 0 1 1 1 0 1 1 2 1 0 0 1 0 0 16 1 1787.953 D6RDA2 D6RDA2 2 17 DEK yes yes 3 0.0032575 54.402 By MS/MS By matching 1 1 4488600 4373200 115400 788 215 816 1672;1673 1328 1328 163 155;156 1 QYATLDVYNPFETR VIQHRPSRQYATLDVY VYNPFETREPPPAYEP R Q Y T R E 1 1 1 1 0 1 1 0 0 0 1 0 0 1 1 0 2 0 2 1 0 0 14 0 1715.8155 O14828 O14828 34 47 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 0.00060436 89.356 By MS/MS 1 1717900 0 1717900 789 442 817 1674 1329 1329 914 1 RAAGGGGPGGPGGSGDFLLIYLANLEAK LREVAHSRRAAGGGGP YLANLEAKSRQVAALL R R A A K S 4 1 1 1 0 0 1 9 0 1 4 1 0 1 2 1 0 0 1 0 0 0 28 1 2614.3503 Q9ULV8 Q9ULV8 63 90 CBLC E3 ubiquitin-protein ligase CBL-C yes yes 3 0.011375 30.958 By matching By MS/MS 1 1 5086500 1651100 3435400 790 783 818 1675;1676 1330 1330 0 RAATLYSQYTSKNDENR SPSNGVERRAATLYSQ TSKNDENR________ R R A N R - 2 2 2 1 0 1 1 0 0 0 1 1 0 0 0 2 2 0 2 0 0 0 17 2 2015.9661 H0YDZ1;Q86WG5 H0YDZ1 116 132 SBF2 Myotubularin-related protein 13 yes no 3 0.0074301 42.818 By MS/MS 1 0 0 0 791 358 819 1677 1331 1331 47 758;759;902 1 RAGDLLEDSPK NEKGALKRRAGDLLED DLLEDSPKRPKEAENP R R A P K R 1 1 0 2 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 11 1 1199.6146 P51858 P51858 157 167 HDGF Hepatoma-derived growth factor yes yes 2 0.0030375 71.879 By MS/MS By matching 1 1 3130400 1420400 1709900 792 566 820 1678;1679 1332 1332 435 1 RALPNNTSSSPQPK ELPPGSTKRALPNNTS TSSSPQPKKKPLDGEY K R A P K K 1 1 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 14 1 1495.7743 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 147 160 TP53 Cellular tumor antigen p53 yes no 3 0.0022844 56.29 By matching By MS/MS 1 1 748010 339850 408170 793 38 821 1680;1681 1333 1333 19;20 1 RANSYEDAMMPFPGATIISQLLK NVLRKLLKRANSYEDA TIISQLLKNNMNKNGG K R A L K N 3 1 1 1 0 1 1 1 0 2 2 1 2 1 2 2 1 0 1 0 0 0 23 1 2552.2767 U3KPY6;C9JU29;Q92786 U3KPY6 76 98 PROX1 Prospero homeobox protein 1 yes no 3 0.014438 27.72 By MS/MS By matching 1 1 9256400 4053900 5202500 794 190 822 1682;1683 1334 1334 1 RASGQAFELILSPR IQVKELEKRASGQAFE FELILSPRSKESVPEF K R A P R S 2 2 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 14 1 1543.8471 A2A2D0;P16949 A2A2D0 14 27 STMN1 Stathmin yes no 3 0.0074492 42.908 By MS/MS By matching 1 1 635930 327630 308300 795 116 823 1684;1685 1335 1335 80;81 1 RASISEPSDTDPEPR VKSRVRVRRASISEPS SDTDPEPRTLNPSPAG R R A P R T 1 2 0 2 0 0 2 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 15 1 1655.7751 C9JQV3;Q8N1F8 C9JQV3 385 399 STK11IP Serine/threonine-protein kinase 11-interacting protein yes no 2 0.0013971 69.485 By matching By MS/MS 1 1 1675900 966420 709460 796 186 824 1686;1687 1336 1336 142 1 RDSDGVDGFEAEGKK IHNNRKRRRDSDGVDG GFEAEGKKDKKDYDNF R R D K K D 1 1 0 3 0 0 2 3 0 0 0 2 0 1 0 1 0 0 0 1 0 0 15 2 1608.738 Q96KR1 Q96KR1 1052 1066 ZFR Zinc finger RNA-binding protein yes yes 3 0.010836 56.748 By MS/MS By matching 1 1 817650 443810 373840 797 722 825 1688;1689 1337 1337 578 1 RDSEAFSVDEPSTHTVR R D V R 1 2 0 2 0 0 2 0 1 0 0 0 0 1 1 3 2 0 0 2 0 0 17 1 1931.8973 REV__A0A0J9YVU1 yes no 2 0.014939 50.207 By matching By MS/MS 1 1 1572100 619520 952570 + 798 804 826 1690;1691 1338 1338 664;665;860 0 RDSFDDRGPSLNPVLDYDHGSR WEEKRHFRRDSFDDRG LDYDHGSRSQESGYYD R R D S R S 0 3 1 5 0 0 0 2 1 0 2 0 0 1 2 3 0 0 1 1 0 0 22 2 2517.1633 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 186 207 MATR3 Matrin-3 yes no 4 0.00028251 62.468 By MS/MS By MS/MS 1 1 3413400 1318700 2094700 799 91 827 1692;1693 1339;1340 1339 62 2 RDSLTGSSDLYK SNTGSGSRRDSLTGSS TGSSDLYKRTSSSLTP R R D Y K R 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 0 0 12 1 1340.6572 H0YDK8;E9PR38;Q5T1Z4;Q5T1Z8;Q14671 H0YDK8 419 430 PUM1 Pumilio homolog 1 yes no 2 0.0043481 63.76 By MS/MS By MS/MS 1 1 2646900 1091800 1555100 800 276 828 1694;1695 1341;1342 1341 218;737 2 RDSSESQLASTESDKPTTGR PCLLMELRRDSSESQL SDKPTTGRVYESDSSN R R D G R V 1 2 0 2 0 1 2 1 0 0 1 1 0 0 1 5 3 0 0 0 0 0 20 2 2151.004 K7EQH1;A0A087WVF1;Q5BIX2;Q96B23 K7EQH1 64 83 C18orf25;ARKL1 Uncharacterized protein C18orf25 yes no 3 2.8147E-15 99.409 By matching By MS/MS 1 1 3181400 1359900 1821500 801 25 829 1696;1697 1343 1343 12 1 REVESQAQQQLER EEDRESARREVESQAQ QAQQQLERAKHKPVAF R R E E R A 1 2 0 0 0 4 3 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 13 1 1599.7965 F8W0F8;F8VWK1;F8VV14;F8VNV8;P54284 F8W0F8 41 53 CACNB3 Voltage-dependent L-type calcium channel subunit beta-3 yes no 2 0.0087372 52.725 By MS/MS 1 0 0 0 802 300 830 1698 1344 1344 176;177 1 RGFSDSGGGPPAK GRGSLLLRRGFSDSGG SGGGPPAKQRDLEGAV R R G A K Q 1 1 0 1 0 0 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 13 1 1231.5945 G3V5F0;G3V579;Q9H307 G3V5F0 63 75 PNN Pinin yes no 2 0.0067741 54.951 By matching By MS/MS 1 1 2123700 940640 1183000 803 325 831 1699;1700 1345 1345 263 1 RGNDPLTSSPGR ASSPAQRRRGNDPLTS PLTSSPGRSSRRTDAL R R G G R S 0 2 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 12 1 1255.6269 C9J013;C9JZ21;F8WDM3;P49736 C9J013 10 21 MCM2 DNA replication licensing factor MCM2 yes no 2 0.0022964 77.633 By MS/MS By MS/MS 1 1 9545800 4418400 5127400 804 171 832 1701;1702 1346;1347;1348;1349 1347 127 4 RGSGDTSSLIDPDTSLSELR PLSGNSSRRGSGDTSS DTSLSELRDIYDLKDQ R R G L R D 0 2 0 3 0 0 1 2 0 1 3 0 0 0 1 5 2 0 0 0 0 0 20 1 2105.0237 C9JSU1;Q9Y608 C9JSU1 94 113 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 3 0.0097623 46.209 By MS/MS 1 637230 0 637230 805 188 833 1703 1350 1350 718 1 RHPDYSVVLLLR MFLYEYARRHPDYSVV YSVVLLLRLAKTYETT R R H L R L 0 2 0 1 0 0 0 0 1 0 3 0 0 0 1 1 0 0 1 2 0 0 12 1 1466.8358 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;C9JKR2 A0A0C4DGB6 361 372 ALB Serum albumin yes no 3 1.0886E-06 106.79 By MS/MS By MS/MS 1 1 4416200 2057200 2359000 + 806 77 834 1704;1705 1351;1352 1352 2 RHPYFYAPELLFFAK KYLYEIARRHPYFYAP PELLFFAKRYKAAFTE R R H A K R 2 1 0 0 0 0 1 0 1 0 2 1 0 3 2 0 0 0 2 0 0 0 15 1 1897.9879 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;H7C013 A0A0C4DGB6 169 183 ALB Serum albumin yes no 3 2.0669E-23 130.47 By MS/MS By MS/MS 1 1 12508000 7023700 5484200 + 807 77 835 1706;1707 1353;1354 1353 2 RHSEVETDSK VGAGKRKRRHSEVETD SEVETDSKKKKMKLPE R R H S K K 0 1 0 1 0 0 2 0 1 0 0 1 0 0 0 2 1 0 0 1 0 0 10 1 1186.5578 Q9NX58 Q9NX58 274 283 LYAR Cell growth-regulating nucleolar protein yes yes 3 0.00073119 98.592 By MS/MS By MS/MS 1 1 471670 261370 210300 808 766 836 1708;1709 1355;1356 1355 626 2 RIDISPSTFR KKSPEIHRRIDISPST DISPSTFRKHGLAHDE R R I F R K 0 2 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 10 1 1190.6408 Q9Y2W1 Q9Y2W1 678 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0010388 103.91 By MS/MS By MS/MS 1 1 6133100 3268300 2864800 809 792 837 1710;1711 1357;1358 1358 657 2 RIDISPSTLR QKSPEIHRRIDISPST DISPSTLRKHTRLAGE R R I L R K 0 2 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 10 1 1156.6564 E9PQN2;E9PKI6;E9PK91;Q9NYF8 E9PQN2 652 661 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 2.2896E-144 180.61 By MS/MS By MS/MS 1 1 17776000 8694500 9081800 810 264 838 1712;1713 1359;1360 1360 203 2 RIRQCSMVQNHR KCCPPTLRRIRQCSMV CSMVQNHRQLRSQTRL R R I H R Q 0 3 1 0 1 2 0 0 1 1 0 0 1 0 0 1 0 0 0 1 0 0 12 2 1583.7885 E5RHE5;O43300 E5RHE5 15 26 LRRTM2 Leucine-rich repeat transmembrane neuronal protein 2 yes no 3 0.012583 40.589 By MS/MS By matching 1 1 537110 234770 302340 811 222 839 1714;1715 1361 1361 30;165 159 1 RISTSDILSEK DKEQNLTRRISTSDIL TSDILSEKKLGEDEEE R R I E K K 0 1 0 1 0 0 1 0 0 2 1 1 0 0 0 3 1 0 0 0 0 0 11 1 1247.6721 O60293 O60293 350 360 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 0.0029535 76.01 By MS/MS By MS/MS 1 1 1620600 595960 1024600 812 451 840 1716;1717 1362;1363 1363 364 2 RIVLSLFPIASWLPAYR SCSPQKAKRIVLSLFP ASWLPAYRLKEWLLSD K R I Y R L 2 2 0 0 0 0 0 0 0 2 3 0 0 1 2 2 0 1 1 1 0 0 17 1 2001.1564 C9JFJ2;P40879 C9JFJ2 52 68 SLC26A3 Chloride anion exchanger yes no 3 0.0039675 46.89 By MS/MS 1 146150 0 146150 813 184 841 1718 1364 1364 140 0 RLDSSCLESVK ESRNRVKRRLDSSCLE SSCLESVKQKCVKSCN R R L V K Q 0 1 0 1 1 0 1 0 0 0 2 1 0 0 0 3 0 0 0 1 0 0 11 1 1292.6395 F5GZ90;Q9NZJ0 F5GZ90 512 522 DTL Denticleless protein homolog yes no 2 0.004834 65.224 By MS/MS 1 593780 0 593780 814 288 842 1719 1365 1365 231 1 RLDVVAGSVTVLSGR RRLAELERRLDVVAGS SVTVLSGRRGTELGGA R R L G R R 1 2 0 1 0 0 0 2 0 0 2 0 0 0 0 2 1 0 0 4 0 0 15 1 1527.8733 A0A0C4DFX3;Q9Y6C2 A0A0C4DFX3 368 382 EMILIN1 EMILIN-1 yes no 3 0.013937 28.549 By MS/MS By matching 1 1 465990 167860 298130 815 74 843 1720;1721 1366 1366 1 RLNHSPPQSSSR EREKKFSRRLNHSPPQ SPPQSSSRYRENRSRD R R L S R Y 0 2 1 0 0 1 0 0 1 0 1 0 0 0 2 4 0 0 0 0 0 0 12 1 1364.6909 A0A087X0H9;Q5T8P6 A0A087X0H9 123 134 RBM26 RNA-binding protein 26 yes no 3 0.0076847 46.41 By MS/MS By matching 1 1 3094400 1577800 1516500 816 39 844 1722;1723 1367 1367 22 1 RLSPSASPPR SSPPRKTRRLSPSASP SPSASPPRRRHRPSPP R R L P R R 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 0 0 0 10 1 1066.5883 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 382 391 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.010245 53.034 By MS/MS By MS/MS 1 1 3416700 1631400 1785300 817 133 845 1724;1725 1368;1369 1368 106;107;108 2 RLSQPESAEK SSSSVQARRLSQPESA SQPESAEKHVTQRLQP R R L E K H 1 1 0 0 0 1 2 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1143.5884 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 650 659 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0021052 91.093 By MS/MS By MS/MS 2 2 8873900 4513000 4361000 818 233 846 1726;1727;1728;1729 1370;1371;1372;1373 1373 171 4 RLSTSPDVIQGHQPR RAQQQSQRRLSTSPDV VIQGHQPRDNHTDHGG R R L P R D 0 2 0 1 0 2 0 1 1 1 1 0 0 0 2 2 1 0 0 1 0 0 15 1 1689.8911 Q9Y385 Q9Y385 264 278 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 3 0.00015661 84.208 By MS/MS By matching 1 1 1915100 905090 1010100 819 795 847 1730;1731 1374 1374 659;857 1 RNEGVVGGEDYEEVDR SYAPRHSRRNEGVVGG EDYEEVDRYSRQGRVA R R N D R Y 0 2 1 2 0 0 4 3 0 0 0 0 0 0 0 0 0 0 1 3 0 0 16 1 1821.8129 H3BQQ2;Q86UK7 H3BQQ2 241 256 ZNF598 Zinc finger protein 598 yes no 3 0.008504 40.014 By matching By MS/MS 1 1 929240 413850 515380 820 380 848 1732;1733 1375 1375 904 1 RNSCNVGGGGGGFK PGGGGGKRRNSCNVGG GGGGGGFKHPAFKRRR R R N F K H 0 1 2 0 1 0 0 6 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1365.6208 Q7L2J0 Q7L2J0 150 163 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 0.0015381 68.972 By matching By MS/MS 1 1 1164100 474350 689790 821 674 849 1734;1735 1376 1376 521 1 RNSLTGEEGQLAR PRRAGALRRNSLTGEE GEEGQLARVSNWPLYC R R N A R V 1 2 1 0 0 1 2 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 13 1 1429.7274 Q9BX95 Q9BX95 110 122 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 2 0.0021802 67.102 By MS/MS By matching 1 1 4830000 2499000 2331000 822 739 850 1736;1737 1377 1377 591 1 RNSSEASSGDFLDLK LESSGLQRRNSSEASS SGDFLDLKGEGDIHEN R R N L K G 1 1 1 2 0 0 1 1 0 0 2 1 0 1 0 4 0 0 0 0 0 0 15 1 1624.7693 J3KSH8;J3KT51;Q9UK76 J3KSH8 39 53 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 2 2.2717E-14 115.34 By matching By MS/MS 1 1 10516000 3927900 6588400 823 412 851 1738;1739 1378 1378 323 1 RPAAAAAAGSASPR PGRKGSGKRPAAAAAA AAGSASPRSWDEAEAQ K R P P R S 7 2 0 0 0 0 0 1 0 0 0 0 0 0 2 2 0 0 0 0 0 0 14 1 1252.6636 Q96S55 Q96S55 142 155 WRNIP1 ATPase WRNIP1 yes yes 2 0.0082516 49.621 By MS/MS By MS/MS 1 1 2201600 1191600 1010000 824 728 852 1740;1741 1379;1380 1379 581 2 RPASVSSSAAVEHEQR PTDLGAHKRPASVSSS AAVEHEQREAAAKEKQ K R P Q R E 3 2 0 0 0 1 2 0 1 0 0 0 0 0 1 4 0 0 0 2 0 0 16 1 1709.8445 Q7Z5L9 Q7Z5L9 237 252 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 7.7153E-05 86.777 By MS/MS By MS/MS 1 1 1328200 508980 819210 825 678 853 1742;1743 1381;1382;1383 1382 528;529 3 RPCFSALEVDETYVPK CTESLVNRRPCFSALE VDETYVPKEFNAETFT R R P P K E 1 1 0 1 1 0 2 0 0 0 1 1 0 1 2 1 1 0 1 2 0 0 16 1 1909.9244 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;C9JKR2;A0A087WWT3 A0A0C4DGB6 509 524 ALB Serum albumin yes no 3 0.0049872 51.03 By MS/MS By matching 1 1 1064900 413840 651090 + 826 77 854 1744;1745 1384 1384 1 RPDDVPLSLSPSKR RARLAALKRPDDVPLS LSLSPSKRACASPSAQ K R P K R A 0 2 0 2 0 0 0 0 0 0 2 1 0 0 3 3 0 0 0 1 0 0 14 2 1565.8526 F8WDB4;Q9UFC0 F8WDB4 82 95 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 0.0085546 60.826 By matching By MS/MS 1 1 668730 289680 379050 827 315 855 1746;1747 1385 1385 254 1 RPDPDSDEDEDYER HEASGFARRPDPDSDE DEDEDYERERRKRSMG R R P E R E 0 2 0 5 0 0 3 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 14 1 1736.6762 Q5W011;Q5W010;H0Y6J6;Q5W012;Q96I25 Q5W011 150 163 RBM17 Splicing factor 45 yes no 2 0.0042319 58.83 By MS/MS By matching 1 1 2314000 992510 1321500 828 345 856 1748;1749 1386 1386 277 1 RPEGPGAQAPSSPR LTDSGPERRPEGPGAQ AQAPSSPRVTEAPCYP R R P P R V 2 2 0 0 0 1 1 2 0 0 0 0 0 0 4 2 0 0 0 0 0 0 14 1 1405.7062 P40222 P40222 504 517 TXLNA Alpha-taxilin yes yes 3 0.00067179 70.26 By MS/MS By MS/MS 1 1 2822500 929370 1893100 829 553 857 1750;1751 1387;1388 1388 424;425 2 RPESPSEISPIK TWNSQFGKRPESPSEI PSEISPIKGSVRTGLF K R P I K G 0 1 0 0 0 0 2 0 0 2 0 1 0 0 3 3 0 0 0 0 0 0 12 1 1338.7143 Q7Z5K2 Q7Z5K2 218 229 WAPAL Wings apart-like protein homolog yes yes 2 0.0053628 56.286 By matching By MS/MS 1 1 1076400 411540 664900 830 677 858 1752;1753 1389 1389 525;526 1 RPMEEDGEEKSPSK TYAITPMKRPMEEDGE GEEKSPSKKKKKIQKK K R P S K K 0 1 0 1 0 0 4 1 0 0 0 2 1 0 2 2 0 0 0 0 0 0 14 2 1617.7305 Q12906 Q12906 372 385 ILF3 Interleukin enhancer-binding factor 3 yes yes 3 0.0019841 89.669 By MS/MS By MS/MS 2 2 7179100 3360000 3819100 831 606 859;860 1754;1755;1756;1757 1390;1391;1392 1390 82 464;465 3 RPNEDSDEDEEKGAVVPPVHDIYR AVLTKAVKRPNEDSDE PPVHDIYRARQQKRIR K R P Y R A 1 2 1 4 0 0 4 1 1 1 0 1 0 0 3 1 0 0 1 3 0 0 24 2 2765.2893 H0YE74;Q12996 H0YE74 60 83 CSTF3 Cleavage stimulation factor subunit 3 yes no 4 1.1698E-13 86.557 By MS/MS By matching 1 1 2503200 1348200 1155000 832 360 861 1758;1759 1393 1393 285 1 RPPSPEPSTK QEEEERKRRPPSPEPS PSPEPSTKVSEEAESQ R R P T K V 0 1 0 0 0 0 1 0 0 0 0 1 0 0 4 2 1 0 0 0 0 0 10 1 1094.572 A0A087WUZ3;Q01082 A0A087WUZ3 2101 2110 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.00023702 109.15 By MS/MS By MS/MS 1 1 3386900 1739400 1647500 833 22 862 1760;1761 1394;1395;1396;1397 1397 10 4 RPSPQPSPR SYSPVERRRPSPQPSP PSPQPSPRDQQSSSSE R R P P R D 0 2 0 0 0 1 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 9 1 1020.5465 Q9UQ35;I3L4U6 Q9UQ35 2700 2708 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0064806 77.923 By matching By MS/MS 1 1 1533100 773200 759920 834 787 863 1762;1763 1398 1398 645 1 RPSVGSQSNQAGQGK PGVFLTQRRPSVGSQS SNQAGQGKRPKKGLAT R R P G K R 1 1 1 0 0 3 0 3 0 0 0 1 0 0 1 3 0 0 0 1 0 0 15 1 1499.7441 H0Y3N9;Q9UPP1 H0Y3N9 887 901 PHF8 Histone lysine demethylase PHF8 yes no 2 0.010307 46.41 By matching By MS/MS 1 1 390260 220840 169420 835 336 864 1764;1765 1399 1399 273 1 RQLLTKQDSLDIYNER LRGRRGSRRQLLTKQD SLDIYNERDLFKTEEP R R Q E R D 0 2 1 2 0 2 1 0 0 1 3 1 0 0 0 1 1 0 1 0 0 0 16 2 1991.0436 Q9ULQ0 Q9ULQ0 346 361 STRIP2 Striatin-interacting protein 2 yes yes 2 0.014475 45.257 By MS/MS 1 0 0 0 836 781 865 1766 1400 1400 114 854 1 RQSPLPPQK ________________ QSPLPPQKKKPRPPPA K R Q Q K K 0 1 0 0 0 2 0 0 0 0 1 1 0 0 3 1 0 0 0 0 0 0 9 1 1049.5982 B2REB7;Q01105 B2REB7 5 13 SET Protein SET yes no 2 0.0062608 95.618 By MS/MS 1 653170 653170 0 837 142 866 1767 1401 1401 114 1 RSDCPFWVTPESCDVPPLK KIMVVWTRRSDCPFWV SCDVPPLKSMAMRLHF R R S L K S 0 1 0 2 2 0 1 0 0 0 1 1 0 1 4 2 1 1 0 2 0 0 19 1 2289.0558 Q49A14;Q6ZU64 Q49A14 167 185 CCDC108 Coiled-coil domain-containing protein 108 yes no 3 0.014359 30.107 By MS/MS By MS/MS 1 2 0 0 0 838 635 867 1768;1769;1770 1402;1403;1404 1403 3 RSFKAVVTAATMQSK EQNVQKRKRSFKAVVT TAATMQSKLIQKGNDR K R S S K L 3 1 0 0 0 1 0 0 0 0 0 2 1 1 0 2 2 0 0 2 0 0 15 2 1623.8767 A0A0A0MT06;O00222 A0A0A0MT06 362 376 GRM8 Metabotropic glutamate receptor 8 yes no 2 0.011946 42.277 By MS/MS 1 0 0 0 839 65 868 1771 1405 1405 12 47;688 1 RSLTNSHLEK FISDRESRRSLTNSHL LTNSHLEKKKCDEYIP R R S E K K 0 1 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 10 1 1183.6309 F8VX12;F8VX04;Q9H2H9 F8VX12 51 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 3 0.0041473 79.744 By MS/MS 1 684740 0 684740 840 308 869 1772 1406 1406 744 1 RSTQESLTAGGTDLKR APATRVTRRSTQESLT AGGTDLKRELHPPATS R R S K R E 1 2 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 16 2 1718.8911 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 303 318 LRRC41 Leucine-rich repeat-containing protein 41 yes no 3 0.0027172 62.813 By MS/MS By matching 1 1 605560 355350 250210 841 15 870 1773;1774 1407 1407 6 1 RSTSPIIGSPPVR LSERALPRRSTSPIIG IIGSPPVRAVPIGTPP R R S V R A 0 2 0 0 0 0 0 1 0 2 0 0 0 0 3 3 1 0 0 1 0 0 13 1 1365.7728 Q86TB9 Q86TB9 176 188 PATL1 Protein PAT1 homolog 1 yes yes 2 0.014939 41.621 By matching By MS/MS 1 1 860650 476180 384470 842 679 871 1775;1776 1408 1408 530;531 0 RTIQPSDRLK R T L K 0 2 0 1 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 0 0 0 10 2 1212.6939 REV__A0A075B7E9 yes no 2 0.014939 49.5 By MS/MS By matching 2 1 4354900 2831300 1523600 + 843 800 872 1777;1778;1779 1409 1409 253 1 RVPSPTPAPK VQPEVALKRVPSPTPA PSPTPAPKEAVREGRP K R V P K E 1 1 0 0 0 0 0 0 0 0 0 1 0 0 4 1 1 0 0 1 0 0 10 1 1048.6029 Q9UQ35 Q9UQ35 2578 2587 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0014066 101.35 By MS/MS By MS/MS 1 1 5058400 3018800 2039600 844 787 873 1780;1781 1410;1411;1412 1410 646 3 RVSLSEIGFGK KPLSRRLRRVSLSEIG LSEIGFGKLETYIKLD R R V G K L 0 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 1 0 0 11 1 1191.6612 H0YBX5;E5RJM2;E5RGN0;A0A087WZU2;Q00536 H0YBX5 111 121 CDK16 Cyclin-dependent kinase 16 yes no 2 0.0041357 67.519 By matching By MS/MS 1 1 761700 343790 417910 845 37 874 1782;1783 1413 1413 18 1 RVSLVGADDLR PQAEGPPKRVSLVGAD LVGADDLRKMQEEEAR K R V L R K 1 2 0 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 11 1 1199.6622 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1295 1305 SCRIB Protein scribble homolog yes no 2 0.0044359 66.533 By matching By MS/MS 1 1 2303000 1180800 1122200 846 88 875 1784;1785 1414 1414 60 1 RYEDDGISDDEIEGKR ________________ DDEIEGKRTFDLEEKL R R Y K R T 0 2 0 4 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 0 0 0 16 2 1895.8497 I3VM54;Q9Y2K7 I3VM54 4 19 KDM2A Lysine-specific demethylase 2A yes no 3 0.0078517 58.107 By matching By MS/MS 1 1 1316600 765410 551240 847 406 876 1786;1787 1415 1415 316 1 RYPSSISSSPQK EQRSTQTRRYPSSISS SISSSPQKDLTQAKNG R R Y Q K D 0 1 0 0 0 1 0 0 0 1 0 1 0 0 2 5 0 0 1 0 0 0 12 1 1335.6783 F8W726;Q14157 F8W726 612 623 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.0070789 47.506 By matching By MS/MS 1 1 794690 286400 508280 848 311 877 1788;1789 1416 1416 248 1 RYSPPIQR RRRSPSPRRYSPPIQR RYSPPIQRRYSPSPPP R R Y Q R R 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 8 1 1015.5563 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 604 611 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 1.5249E-09 133.99 By MS/MS By MS/MS 1 1 10236000 5195100 5041300 849 133 878 1790;1791 1417;1418 1418 109 2 SASADNLTLPR LRRSARKRSASADNLT ADNLTLPRWSPAIIS_ R S A P R W 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 2 1 0 0 0 0 0 11 0 1143.5884 Q8ND76 Q8ND76 324 334 CCNY Cyclin-Y yes yes 2 0.0090185 75.739 By MS/MS By matching 1 1 1137300 538010 599280 850 698 879 1792;1793 1419 1419 550 1 SASASHQADIK RPPKSARRSASASHQA ASHQADIKEARREVEV R S A I K E 3 0 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1113.5415 C9JXK0;Q14739 C9JXK0 97 107 LBR Lamin-B receptor yes no 2 2.2978E-05 120.9 By MS/MS By MS/MS 1 1 3314200 1642700 1671500 851 193 880 1794;1795 1420;1421;1422;1423 1423 145 4 SASSGAEGDVSSEREP NTPRKEDRSASSGAEG DVSSEREP________ R S A E P - 2 1 0 1 0 0 3 2 0 0 0 0 0 0 1 5 0 0 0 1 0 0 16 1 1563.6649 Q8TEA8 Q8TEA8 194 209 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 2 0.0027349 75.316 By MS/MS By MS/MS 1 1 3394500 1537000 1857600 852 703 881 1796;1797 1424;1425 1425 556;557 2 SASWGSTDQLK KKKGSHKRSASWGSTD WGSTDQLKEIAKLRQQ R S A L K E 1 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 1 1 0 0 0 0 11 0 1178.5568 Q6P1L5 Q6P1L5 271 281 FAM117B Protein FAM117B yes yes 2 0.0088541 72.731 By matching By MS/MS 1 1 1430500 738960 691550 853 660 882 1798;1799 1426 1426 515 1 SAVELGAGTGLVGIVAALLALK GAVELRGRSAVELGAG VAALLALKSSMKPLLV R S A L K S 5 0 0 0 0 0 1 4 0 1 5 1 0 0 0 1 1 0 0 3 0 0 22 0 2022.2089 H7BXH9 H7BXH9 68 89 METTL21A yes yes 2 0.014112 13.746 By MS/MS 1 153860 153860 0 854 386 883 1800 1427 1427 0 SAVLHSQSSSSSSRQLVP IYYFPRSKSAVLHSQS SSSRQLVP________ K S A V P - 1 1 0 0 0 2 0 0 1 0 2 0 0 0 1 8 0 0 0 2 0 0 18 1 1855.9388 A0A0A0MRH8;A0A0A0MSH9 A0A0A0MRH8 599 616 CHD1L yes no 2 0.011424 43.084 By MS/MS 1 0 0 0 855 56 884 1801 1428 1428 130 36;37;38;39;40 1 SCALQLNYRVH GLTQPPLRSCALQLNY LQLNYRVH________ R S C V H - 1 1 1 0 1 1 0 0 1 0 2 0 0 0 0 1 0 0 1 1 0 0 11 1 1359.6718 K7EIR1 K7EIR1 55 65 TMED1 yes yes 2 0.010415 42.19 By MS/MS 1 356280 0 356280 856 420 885 1802 1429 1429 54 330;909 1 SCAVAEYGVYVK TGILSFDKSCAVAEYG AEYGVYVKVTSIQDWV K S C V K V 2 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 2 3 0 0 12 0 1344.6384 A0A087WU08;A0A0C4DGL8;J3QLC9;J3QR68;H0Y300;P00738;A0A0A0MRD9;P00739 A0A087WU08 255 266 HP;HPR Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain;Haptoglobin-related protein yes no 2 0.011282 60.518 By matching By MS/MS 1 1 576840 214720 362120 857 17 886 1803;1804 1430 1430 1 SCFESSPDPELK QSVTPQRRSCFESSPD SSPDPELKSRTPSRHS R S C L K S 0 0 0 1 1 0 2 0 0 0 1 1 0 1 2 3 0 0 0 0 0 0 12 0 1394.6024 Q9UQ35;I3L182;I3L4D8 Q9UQ35 871 882 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 1.1525E-11 132.5 By MS/MS By MS/MS 1 1 7304700 3593200 3711500 858 787 887 1805;1806 1431;1432 1431 647;648 2 SCSKTVTKTVIGPDGHK GSTTTTRRSCSKTVTK VIGPDGHKEVTKEVVT R S C H K E 0 0 0 1 1 0 0 2 1 1 0 3 0 0 1 2 3 0 0 2 0 0 17 2 1813.9356 P02671 P02671 460 476 FGA Fibrinogen alpha chain;Fibrinopeptide A;Fibrinogen alpha chain yes yes 3 0.011325 40.801 By MS/MS By matching 1 1 535840 230060 305780 859 484 888 1807;1808 1433 1433 385;786;787 1 SDNILLGMDGSVK QVIHRDIKSDNILLGM LGMDGSVKLTDFGFCA K S D V K L 0 0 1 2 0 0 0 2 0 1 2 1 1 0 0 2 0 0 0 1 0 0 13 0 1347.6704 A0A087X294;O75914;H0YCG5;E9PM17;B3KNX7;Q13153 A0A087X294 389 401 PAK3;PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 3;Serine/threonine-protein kinase PAK 1 yes no 2 0.012852 55.721 By matching By MS/MS 1 1 685340 238930 446420 860 49 889 1809;1810 1434 1434 1 SEDESETEDEEEKSQEDQEQKR KEKKRKKRSEDESETE QEDQEQKRKRRKTRQP R S E K R K 0 1 0 3 0 3 9 0 0 0 0 2 0 0 0 3 1 0 0 0 0 0 22 2 2683.0853 Q7Z6P5;J3KQ69;P25205 Q7Z6P5 163 184 MCM3 DNA replication licensing factor MCM3 yes no 3 8.1377E-05 73.11 By matching By MS/MS 1 1 20739000 7633000 13106000 861 409 890 1811;1812 1435 1435 319 1 SEISQVFEIALK SEEENLNKSEISQVFE QVFEIALKRNLPVNFE K S E L K R 1 0 0 0 0 1 2 0 0 2 1 1 0 1 0 2 0 0 0 1 0 0 12 0 1362.7395 Q5JW28;A0A087X1A5;Q5JW30;O95793 Q5JW28 103 114 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 2 0.011032 62.528 By matching By MS/MS 1 1 1657700 832110 825590 862 45 891 1813;1814 1436 1436 127 27;28 1 SEMSGATTSLATVALDPPSDR ________________ ALDPPSDRTSHPQDVI M S E D R T 3 1 0 2 0 0 1 1 0 0 2 0 1 0 2 4 3 0 0 1 0 0 21 0 2104.9947 H0YKL8;H0YKQ8 H0YKL8 2 22 SLC12A6 yes no 3 0.010992 40.682 By MS/MS By matching 1 1 2412000 936740 1475300 863 366 892 1815;1816 1437 1437 288;289 1 SESPKEPEQLRK ________________ KEPEQLRKLFIGGLSF K S E R K L 0 1 0 0 0 1 3 0 0 0 1 2 0 0 2 2 0 0 0 0 0 0 12 2 1426.7416 F8VTQ5;F8W6I7;P09651;F8W646 F8VTQ5 4 15 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 3 4.8424E-06 113.37 By MS/MS By MS/MS 1 1 7603000 2880600 4722400 864 305 893 1817;1818 1438;1439 1439 246 2 SESPPPLSDPK TSAITASRSESPPPLS PPPLSDPKQAKVVARR R S E P K Q 0 0 0 1 0 0 1 0 0 0 1 1 0 0 4 3 0 0 0 0 0 0 11 0 1152.5663 Q15059 Q15059 261 271 BRD3 Bromodomain-containing protein 3 yes yes 2 0.010161 77.597 By matching By MS/MS 1 1 2433900 1266200 1167600 865 623 894 1819;1820 1440 1440 484 1 SESVVSGLDSPAK KALGILGRSESVVSGL SGLDSPAKTSSMEKKL R S E A K T 1 0 0 1 0 0 1 1 0 0 1 1 0 0 1 4 0 0 0 2 0 0 13 0 1274.6354 H7BYJ3;O14578 H7BYJ3 59 71 CIT Citron Rho-interacting kinase yes no 2 0.0034318 88.224 By matching By MS/MS 1 1 831730 348210 483520 866 388 895 1821;1822 1441 1441 303 1 SETAPAAPAAPAPAEKTPVK ________________ PAEKTPVKKKARKSAG M S E V K K 7 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 2 0 0 1 0 0 20 1 1903.0051 P10412 P10412 2 21 HIST1H1E Histone H1.4 yes yes 3 9.8606E-09 91.883 By matching By MS/MS 1 1 1290700 478300 812420 867 515 896 1823;1824 1442 1442 793 1 SFDHLISDTK KKLLGTRKSFDHLISD DHLISDTKAPKRQEME K S F T K A 0 0 0 2 0 0 0 0 1 1 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1161.5666 J3QSG6;H0Y465;P21359 J3QSG6 338 347 NF1 Neurofibromin;Neurofibromin truncated yes no 2 0.010148 94.363 By MS/MS By matching 1 1 2163200 1019600 1143600 868 338 897 1825;1826 1443 1443 274 1 SFESTVGQGSDTYIYIFR RLKPLFNKSFESTVGQ DTYIYIFRVCREAGNH K S F F R V 0 1 0 1 0 1 1 2 0 2 0 0 0 2 0 3 2 0 2 1 0 0 18 0 2068.9742 F5GXE0;H0YGE9;F5GXU0;F5H883;F5GX30;P20645 F5GXE0 59 76 M6PR Cation-dependent mannose-6-phosphate receptor yes no 2;3 1.547E-07 125.54 By MS/MS By MS/MS 2 1 5060400 3101800 1958500 869 281 898 1827;1828;1829 1444;1445;1446 1444 2 SFEVEEVETPNSTPPR RPFTALKRSFEVEEVE TPNSTPPRRVQTPLLR R S F P R R 0 1 1 0 0 0 4 0 0 0 0 0 0 1 3 2 2 0 0 2 0 0 16 0 1816.8479 K7EJV0;K7EPY1;K7ENL0;Q9UHD8 K7EJV0 15 30 SEPT9 Septin-9 yes no 2 0.0024626 66.246 By MS/MS By MS/MS 1 1 984670 460850 523820 870 421 899 1830;1831 1447;1448 1447 331 2 SFLSEPSSPGR ________________ SEPSSPGRTKTTKGFK R S F G R T 0 1 0 0 0 0 1 1 0 0 1 0 0 1 2 4 0 0 0 0 0 0 11 0 1162.5619 H0YC41;Q69YN4 H0YC41 5 15 KIAA1429 Protein virilizer homolog yes no 2 0.0083822 80.871 By matching By MS/MS 1 1 2349800 1028000 1321800 871 354 900 1832;1833 1449 1449 281;282 1 SFSKEELMSSDLEETAGSTSIPK FSKPKKKKSFSKEELM AGSTSIPKRKKSTPKE K S F P K R 1 0 0 1 0 0 4 1 0 1 2 2 1 1 1 6 2 0 0 0 0 0 23 1 2472.1578 O00567 O00567 511 533 NOP56 Nucleolar protein 56 yes yes 3 0.011524 40.779 By matching By MS/MS 1 1 3507900 1436400 2071500 872 439 901 1834;1835 1450 1450 47 350;351 1 SFSSPENFQR SSAQIIQRSFSSPENF SSPENFQRQAVMNSAL R S F Q R Q 0 1 1 0 0 1 1 0 0 0 0 0 0 2 1 3 0 0 0 0 0 0 10 0 1197.5415 G3V1T9;I3L521;F5GXV8;F5GY08;J3KPD3;Q9Y580 G3V1T9 14 23 RBM7 RNA-binding protein 7 yes no 2 0.0059426 86.014 By MS/MS By matching 1 1 3510100 1581300 1928800 873 282 902 1836;1837 1451 1451 224 1 SGAQASSTPLSPTR PSQRRATRSGAQASST STPLSPTRITRLQEKE R S G T R I 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 4 2 0 0 0 0 0 14 0 1358.679 Q3BDU5;P02545 Q3BDU5 12 25 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.013723 58.164 By matching By MS/MS 1 1 1069100 453230 615910 874 483 903 1838;1839 1452 1452 384 1 SGEGEVSGLMR VSGVKRSRSGEGEVSG GEVSGLMRKVPRVSLE R S G M R K 0 1 0 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 0 1 0 0 11 0 1120.5183 M0R0K9;Q13263 M0R0K9 98 108 TRIM28 Transcription intermediary factor 1-beta yes no 2 0.0072606 81.676 By MS/MS By matching 1 1 1925900 876430 1049500 875 430 904 1840;1841 1453 1453 336 1 SGFGEISSPVIR ________________ EISSPVIREAEVTRTA R S G I R E 0 1 0 0 0 0 1 2 0 2 0 0 0 1 1 3 0 0 0 1 0 0 12 0 1247.651 G3V1T4;P57740 G3V1T4 4 15 NUP107 Nuclear pore complex protein Nup107 yes no 2 5.6139E-06 110.8 By MS/MS By matching 1 1 1893600 1109500 784130 876 320 905 1842;1843 1454 1454 257 1 SGLTVPTSPK DSGSDALRSGLTVPTS LTVPTSPKGRLLDRRS R S G P K G 0 0 0 0 0 0 0 1 0 0 1 1 0 0 2 2 2 0 0 1 0 0 10 0 985.54441 Q5VZS7;Q53EL6 Q5VZS7 73 82 PDCD4 Programmed cell death protein 4 yes no 2 0.011434 80.245 By MS/MS By matching 1 1 15731000 7061300 8670000 877 638 906 1844;1845 1455 1455 493 1 SGNTFRPEVHLLPPPSEELALNELVTLTCLAR PLTANITKSGNTFRPE VTLTCLARGFSPKDVL K S G A R G 2 2 2 0 1 0 4 1 1 0 7 0 0 1 4 2 3 0 0 2 0 0 32 1 3572.8661 A0A0G2JMB2;P01876;P01877 A0A0G2JMB2 209 240 IGHA1;IGHA2 Ig alpha-1 chain C region;Ig alpha-2 chain C region yes no 4 1.3699E-27 86.304 By MS/MS By MS/MS 1 1 23015000 11823000 11192000 878 86 907 1846;1847 1456;1457;1458;1459 1457 4 SGSMDPSGAHPSVR RMSRSSGRSGSMDPSG SGAHPSVRQTPSRQPP R S G V R Q 1 1 0 1 0 0 0 2 1 0 0 0 1 0 2 4 0 0 0 1 0 0 14 0 1383.6201 Q07666 Q07666 18 31 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 2;3 1.4321E-10 122.78 By MS/MS By MS/MS 2 3 29645000 13667000 15978000 879 599 908;909 1848;1849;1850;1851;1852 1460;1461;1462;1463;1464;1465 1464 78 460;461 6 SGVATAPTPRGR LEALGLWRSGVATAPT TAPTPRGRRTTKGWGR R S G G R R 2 2 0 0 0 0 0 2 0 0 0 0 0 0 2 1 2 0 0 1 0 0 12 1 1168.6313 A8MXU7 A8MXU7 116 127 BAD yes yes 2 0.0091229 50.843 By matching By MS/MS 1 1 841200 374870 466330 880 132 910 1853;1854 1466 1466 704;705 1 SHCIAEVENDEMPADLPSLAADFVESK CEKPLLEKSHCIAEVE AADFVESKDVCKNYAE K S H S K D 4 0 1 3 1 0 4 0 1 1 2 1 1 1 2 3 0 0 0 2 0 0 27 0 2973.3372 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;C9JKR2 A0A0C4DGB6 311 337 ALB Serum albumin yes no 3 0.0052254 40.454 By MS/MS By matching 1 1 11545000 5699600 5845600 + 881 77 911 1855;1856 1467 1467 15 1 SHSQASLAGPGPVDPSNR YWNGKLLRSHSQASLA GPVDPSNRSNSMLELA R S H N R S 2 1 1 1 0 1 0 2 1 0 1 0 0 0 3 4 0 0 0 1 0 0 18 0 1775.8551 A2A3M4;A6PVU7;Q9P2M7 A2A3M4 135 152 CGN Cingulin yes no 3 0.00088947 68.261 By MS/MS 1 414960 0 414960 882 118 912 1857 1468 1468 84 1 SHYADVDPENQNFLLESNLGK PTKQAALKSHYADVDP LLESNLGKKKYETEFN K S H G K K 1 0 3 2 0 1 2 1 1 0 3 1 0 1 1 2 0 0 1 1 0 0 21 0 2389.1186 F8VUY8;Q96QD8 F8VUY8 39 59 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 3 0.0060023 49.089 By MS/MS By matching 1 1 1305200 544490 760730 883 307 913 1858;1859 1469 1469 247 1 SIEIHTYGQAFGEYVNDK KYYNELSKSIEIHTYG FGEYVNDKNLIPTIST K S I D K N 1 0 1 1 0 1 2 2 1 2 0 1 0 1 0 1 1 0 2 1 0 0 18 0 2069.9694 Q9Y231 Q9Y231 212 229 FUT9 Alpha-(1,3)-fucosyltransferase 9 yes yes 3 0.013916 35.473 By matching By MS/MS 1 1 1172500 604140 568380 884 789 914 1860;1861 1470 1470 1 SIEVENDFLPVEK KPIKLRPRSIEVENDF NDFLPVEKTIGKKLPA R S I E K T 0 0 1 1 0 0 3 0 0 1 1 1 0 1 1 1 0 0 0 2 0 0 13 0 1517.7613 Q5JPT1;Q5VSN0;Q5JPT2;Q96B97 Q5JPT1 177 189 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes no 2 0.0034585 90.759 By matching By MS/MS 1 1 2220600 942860 1277700 885 639 915 1862;1863 1471 1471 494 1 SIGSAVDQGNESIVAK PGPVKKTRSIGSAVDQ GNESIVAKTTVTVPND R S I A K T 2 0 1 1 0 1 1 2 0 2 0 1 0 0 0 3 0 0 0 2 0 0 16 0 1573.7948 F8W1E5;F8VRD2;Q9H0H5 F8W1E5 129 144 RACGAP1 Rac GTPase-activating protein 1 yes no 2 0.0018213 63.894 By matching By MS/MS 1 1 2350700 1158400 1192300 886 303 916 1864;1865 1472 1472 245 1 SILAKPSSSPDPR LTSVMVPKSILAKPSS PSSSPDPRYLSVPPSP K S I P R Y 1 1 0 1 0 0 0 0 0 1 1 1 0 0 3 4 0 0 0 0 0 0 13 1 1353.7252 Q9BTC0 Q9BTC0 1011 1023 DIDO1 Death-inducer obliterator 1 yes yes 2 0.013794 62.166 By MS/MS By matching 1 1 931520 510910 420610 887 734 917 1866;1867 1473 1473 586;587;588 1 SILVSPTGPSR AEFKKTDKSILVSPTG VSPTGPSRVAFDPEQK K S I S R V 0 1 0 0 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1112.619 Q14684 Q14684 702 712 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.011287 69.229 By matching By MS/MS 1 1 2388000 1022500 1365500 888 620 918 1868;1869 1474 1474 479 1 SIPLECPLSSPK ALTGGEAKSIPLECPL ECPLSSPKGVLFSSKS K S I P K G 0 0 0 0 1 0 1 0 0 1 2 1 0 0 3 3 0 0 0 0 0 0 12 0 1326.6853 I3L2A2;I3L2N7;Q92667 I3L2A2 142 153 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.00079559 99.653 By matching By MS/MS 1 1 2984800 1027100 1957700 889 400 919 1870;1871 1475 1475 312 1 SIQFVDWCPTGFK IATIKTKRSIQFVDWC DWCPTGFKVGINYQPP R S I F K V 0 0 0 1 1 1 0 1 0 1 0 1 0 2 1 1 1 1 0 1 0 0 13 0 1583.7442 P68363;P68366 P68363 340 352 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain yes no 2 0.0040054 70.17 By MS/MS By matching 1 1 635130 369440 265690 890 584 920 1872;1873 1476 1476 1 SISADDDLQESSR PTFQPFQRSISADDDL DDLQESSRRPQRKSLY R S I S R R 1 1 0 3 0 1 1 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0 13 0 1421.627 A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MT02;A0A0A0MSN9;P18615 A2ABK4 113 125 NELFE Negative elongation factor E yes no 2 0.0049167 78.505 By matching By MS/MS 1 1 10471000 4990600 5480700 891 62 921 1874;1875 1477 1477 44 1 SISADSFDQR KGKGKRERSISADSFD SADSFDQRDPGTPNDD R S I Q R D 1 1 0 2 0 1 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 10 0 1124.5098 O00512 O00512 102 111 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 0.011466 80.219 By MS/MS By matching 1 1 452690 130040 322660 892 437 922 1876;1877 1478 1478 349 1 SITLFVQEDR LLATGQWKSITLFVQE TLFVQEDRAQLYIDCE K S I D R A 0 1 0 1 0 1 1 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1206.6245 CON__Q28194;P07996 CON__Q28194 155 164 THBS1 Thrombospondin-1 yes no 2 0.0038304 85.862 By MS/MS By MS/MS 1 1 1320400 677820 642590 + 893 205 923 1878;1879 1479;1480 1479 2 SKESVPEFPLSPPK FELILSPRSKESVPEF EFPLSPPKKKDLSLEE R S K P K K 0 0 0 0 0 0 2 0 0 0 1 2 0 1 4 3 0 0 0 1 0 0 14 1 1540.8137 A2A2D0;P16949 A2A2D0 28 41 STMN1 Stathmin yes no 2 0.0068563 76.82 By MS/MS By matching 1 1 1299700 602250 697460 894 116 924 1880;1881 1481 1481 82 1 SKSDSYTLDPDTLR KLDPPRERSKSDSYTL TLDPDTLRKKKMPLTE R S K L R K 0 1 0 3 0 0 0 0 0 0 2 1 0 0 1 3 2 0 1 0 0 0 14 1 1596.7631 O75592 O75592 2831 2844 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 0.0091204 62.104 By matching By MS/MS 1 1 1109800 538820 571000 895 459 925 1882;1883 1482 1482 369 1 SKSEEAHAEDSVMDHHFR KKGFVLHKSKSEEAHA SVMDHHFRKPANDITS K S K F R K 2 1 0 2 0 0 3 0 3 0 0 1 1 1 0 3 0 0 0 1 0 0 18 1 2110.9127 Q8NC51 Q8NC51 328 345 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 4;5 6.5396E-20 109.07 By MS/MS By MS/MS 4 4 26857000 13691000 13166000 896 696 926;927 1884;1885;1886;1887;1888;1889;1890;1891 1483;1484;1485;1486;1487 1486 87 549 5 SKVGNTYILKASLEPENIK DNMNAERKSKVGNTYI SLEPENIKSTPGVANN K S K I K S 1 0 2 0 0 0 2 1 0 2 2 3 0 0 1 2 1 0 1 1 0 0 19 2 2103.1576 A0A0U1RR07 A0A0U1RR07 735 753 yes yes 3 0.013162 47.113 By matching By MS/MS 1 1 1326800 625190 701600 897 98 928 1892;1893 1488 1488 12 1 SKVGSTENIK APDLKNVRSKVGSTEN VGSTENIKHQPGGGRV R S K I K H 0 0 1 0 0 0 1 1 0 1 0 2 0 0 0 2 1 0 0 1 0 0 10 1 1061.5717 H0Y2V1;H7C4C5;F8W9U4;E7EVA0;P27816 H0Y2V1 303 312 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.0085612 95.183 By matching By MS/MS 1 2 2609400 1035400 1574000 898 242 929 1894;1895;1896 1489;1490 1490 188;728 2 SLCCRNLAVEK NCRCEISKSLCCRNLA CRNLAVEKAVSELPSE K S L E K A 1 1 1 0 2 0 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 0 11 1 1348.6591 E9PQ42;E9PJD7;Q6ZMK1 E9PQ42 69 79 CYHR1 Cysteine and histidine-rich protein 1 yes no 2 0.0052429 80.455 By matching By MS/MS 1 1 7357800 3466900 3890900 899 261 930 1897;1898 1491 1491 1 SLDITTSTTAYFPPGATLNNKEK ATQDNLCKSLDITTST ATLNNKEKNSILLLH_ K S L E K N 2 0 2 1 0 0 1 1 0 1 2 2 0 1 2 2 5 0 1 0 0 0 23 1 2468.2435 H7C1G0;Q8IXB1 H7C1G0 92 114 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3 0.0072321 41.912 By matching By MS/MS 1 1 1135700 462730 673000 900 393 931 1899;1900 1492 1492 308;309;769;770 1 SLDNNYSTPNER SNMGSNTKSLDNNYST NYSTPNERGDHNRTLD K S L E R G 0 1 3 1 0 0 1 0 0 0 1 0 0 0 1 2 1 0 1 0 0 0 12 0 1408.6219 C9JZR2;O60716;H0YC95 C9JZR2 899 910 CTNND1 Catenin delta-1 yes no 2 0.0013648 82.831 By MS/MS By MS/MS 1 1 3497200 1459200 2038100 901 195 932 1901;1902 1493;1494 1494 148;884 2 SLDNNYSTPNERGDHNR SNMGSNTKSLDNNYST NERGDHNRTLDRSGDL K S L N R T 0 2 4 2 0 0 1 1 1 0 1 0 0 0 1 2 1 0 1 0 0 0 17 1 1987.8732 C9JZR2;O60716;H0YC95 C9JZR2 899 915 CTNND1 Catenin delta-1 yes no 3 0.000481 62.861 By MS/MS By MS/MS 1 1 1321200 844890 476310 902 195 933 1903;1904 1495;1496 1495 148;884 2 SLEDLQLTHNK ESVGPLPKSLEDLQLT DLQLTHNKITKLGSFE K S L N K I 0 0 1 1 0 1 1 0 1 0 3 1 0 0 0 1 1 0 0 0 0 0 11 0 1296.6674 P51884 P51884 138 148 LUM Lumican yes yes 3 0.0012716 93.561 By MS/MS 1 278350 278350 0 903 567 934 1905 1497 1497 1 SLEEIYLFSLPIK LVKDMKIKSLEEIYLF YLFSLPIKESEIIDFF K S L I K E 0 0 0 0 0 0 2 0 0 2 3 1 0 1 1 2 0 0 1 0 0 0 13 0 1550.8596 H3BNG3;H0YE27;H0YEN5;E9PPT0;E9PMM9;E9PQD7;P15880 H3BNG3 17 29 RPS2 40S ribosomal protein S2 yes no 2 0.0020883 91.855 By MS/MS 1 1348600 0 1348600 904 271 935 1906 1498 1498 1 SLEYLDLSFNQIAR SAAFKGLKSLEYLDLS LSFNQIARLPSGLPVS K S L A R L 1 1 1 1 0 1 1 0 0 1 3 0 0 1 0 2 0 0 1 0 0 0 14 0 1667.8519 P51884 P51884 185 198 LUM Lumican yes yes 2;3 0 257.72 By MS/MS By MS/MS 3 3 130260000 60706000 69559000 905 567 936;937 1907;1908;1909;1910;1911;1912 1499;1500;1501;1502;1503;1504;1505 1501 84 7 SLGNILQAKPTSSPAK AVAPAQEKSLGNILQA KPTSSPAKGPPQKAGP K S L A K G 2 0 1 0 0 1 0 1 0 1 2 2 0 0 2 3 1 0 0 0 0 0 16 1 1610.8992 J3KQ96;E7ETY2;Q13428 J3KQ96 571 586 TCOF1 Treacle protein yes no 3 0.013033 45.347 By MS/MS By matching 1 1 826810 392330 434480 906 238 938 1913;1914 1506 1506 182 1 SLGPSLATDKS PQNAIRQRSLGPSLAT PSLATDKS________ R S L K S - 1 0 0 1 0 0 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 11 1 1074.5557 Q9H3N1 Q9H3N1 270 280 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.0038483 68.463 By matching By MS/MS 1 1 8262000 3251400 5010600 907 750 939 1915;1916 1507 1507 606 1 SLHQEASSVCSLVSSNT GSIEACYKSLHQEASS CSLVSSNT________ K S L N T - 1 0 1 0 1 1 1 0 1 0 2 0 0 0 0 6 1 0 0 2 0 0 17 0 1804.8261 A0A087X1K8 A0A087X1K8 69 85 SMG1 yes yes 2 0.0017407 57.745 By MS/MS 1 0 0 0 908 46 940 1917 1508 1508 128 29;30;31;32 1 SLLAMQEDAAPGGSEK NSPVLSERSLLAMQED AAPGGSEKLYRVPGQF R S L E K L 3 0 0 1 0 1 2 2 0 0 2 1 1 0 1 2 0 0 0 0 0 0 16 0 1602.7559 H7BYE6;O43182 H7BYE6 516 531 ARHGAP6 Rho GTPase-activating protein 6 yes no 2 0.011381 42.843 By MS/MS 1 0 0 0 909 387 941 1918 1509 1509 39 302 1 SLLSFDVVDKVPQQPK PRSDQKQKSLLSFDVV DKVPQQPKSASSNFAS K S L P K S 0 0 0 2 0 2 0 0 0 0 2 2 0 1 2 2 0 0 0 3 0 0 16 1 1798.9829 Q8N3K9 Q8N3K9 2374 2389 CMYA5 Cardiomyopathy-associated protein 5 yes yes 2 0.0069526 44.188 By MS/MS By MS/MS 1 1 836450 836450 0 910 689 942 1919;1920 1510;1511 1510 227;228 2 SLLVFYVLVNSSQTLHNK TVLFGIARSLLVFYVL SSQTLHNKMFESILKA R S L N K M 0 0 2 0 0 1 0 0 1 0 4 1 0 1 0 3 1 0 1 3 0 0 18 0 2061.1259 O15439 O15439 783 800 ABCC4 Multidrug resistance-associated protein 4 yes yes 3 0.011328 42.277 By MS/MS 1 0 0 0 911 444 943 1921 1512 1512 58;59;200 356;357;915 1 SLNNQFASFIDK SREREQIKSLNNQFAS QFASFIDKVRFLEQQN K S L D K V 1 0 2 1 0 1 0 0 0 1 1 1 0 2 0 2 0 0 0 0 0 0 12 0 1382.683 CON__P04264;P04264;CON__ENSEMBL:ENSBTAP00000038253 CON__P04264 186 197 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.0067295 66.19 By MS/MS By matching 1 1 340190 176690 163500 + 912 202 944 1922;1923 1513 1513 1 SLQDIIAILGMDELSEEDKLTVSR QKILQDYKSLQDIIAI EDKLTVSRARKIQRFL K S L S R A 1 1 0 3 0 1 3 1 0 3 4 1 1 0 0 3 1 0 0 1 0 0 24 1 2674.3735 P06576;F8W079 P06576 433 456 ATP5B ATP synthase subunit beta, mitochondrial yes no 3 2.264E-14 91.565 By MS/MS By MS/MS 1 1 11832000 6167700 5664600 913 496 945 1924;1925 1514;1515 1514 54 2 SLQLTELTLTQCCLGQK RLATGLSKSLQLTELT TQCCLGQKQLAILLSL K S L Q K Q 0 0 0 0 2 3 1 1 0 0 5 1 0 0 0 1 3 0 0 0 0 0 17 0 1992.002 H0YFT3;H0YF88;H0YFG4;H0YFT1;H0YGT6;H0YG32;H0YGE2;Q86WI3 H0YFT3 102 118 NLRC5 Protein NLRC5 yes no 2 0.0060479 54.7 By MS/MS 1 0 0 0 914 363 946 1926 1516 1516 180 761;762 1 SLQWMAGGTFTGEALQYTR QELKEAIKSLQWMAGG GEALQYTRDQLLPPSP K S L T R D 2 1 0 0 0 2 1 3 0 0 2 0 1 1 0 1 3 1 1 0 0 0 19 0 2116.0048 A0A087X0S5;P12109 A0A087X0S5 691 709 COL6A1 Collagen alpha-1(VI) chain yes no 3 0.0062767 44.587 By matching By MS/MS 1 1 744510 416180 328330 915 43 947 1927;1928 1517 1517 9 1 SLSIEIGHEVK RSKVTAIKSLSIEIGH IEIGHEVKTQNKLLAE K S L V K T 0 0 0 0 0 0 2 1 1 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1210.6558 C9JTT8;Q68DU7;H7C1N3;O15155 C9JTT8 48 58 BET1;DKFZp781C0425 BET1 homolog yes no 2 0.003499 88.021 By MS/MS By matching 1 1 6800400 3127500 3672900 916 189 948 1929;1930 1518 1518 143 1 SLSPGGAALGYR PGGGGGQRSLSPGGAA GGAALGYRDYRLQQLA R S L Y R D 2 1 0 0 0 0 0 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 12 0 1147.5986 A0A087WWP4;Q96T37 A0A087WWP4 248 259 RBM15 Putative RNA-binding protein 15 yes no 2 0.010196 66.498 By MS/MS 1 4680000 0 4680000 917 29 949 1931 1519 1519 13 1 SLSSSLDDTEVKK TETPIVSKSLSSSLDD LDDTEVKKVMEECKRL K S L K K V 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 4 1 0 0 1 0 0 13 1 1407.7093 O95292 O95292 156 168 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 0.0010895 80.706 By MS/MS By MS/MS 1 1 1134700 470540 664160 918 466 950 1932;1933 1520;1521 1521 377;378 2 SLYASSPGGVYATR ALRPSTSRSLYASSPG PGGVYATRSSAVRLRS R S L T R S 2 1 0 0 0 0 0 2 0 0 1 0 0 0 1 3 1 0 2 1 0 0 14 0 1427.7045 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 51 64 VIM Vimentin yes no 2 0.013492 51.998 By matching By MS/MS 1 1 803410 398400 405020 919 507 951 1934;1935 1522 1522 1 SLYDEVAAQGEVVR SASILESKSLYDEVAA AAQGEVVRKLKAEKSP K S L V R K 2 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 3 0 0 14 0 1534.7627 V9GYZ6;P07814 V9GYZ6 832 845 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2 0.0070404 48.741 By MS/MS By matching 1 1 762390 404880 357510 920 501 952 1936;1937 1523 1523 919 1 SLYSAISLFNNPVK PTVPKMKKSLYSAISL SLFNNPVKYWEMQPAT K S L V K Y 1 0 2 0 0 0 0 0 0 1 2 1 0 1 1 3 0 0 1 1 0 0 14 0 1551.8297 Q9BXN1 Q9BXN1 342 355 ASPN Asporin yes yes 2 0.0064917 60.691 By MS/MS 1 1001900 1001900 0 921 740 953 1938 1524 1524 1 SMGTGDTPGLEVPSSPLRK TRTRPVTRSMGTGDTP VPSSPLRKAKRARLCS R S M R K A 0 1 0 1 0 0 1 3 0 0 2 1 1 0 3 3 2 0 0 1 0 0 19 1 1927.9673 C9J0I9;Q86WB0 C9J0I9 338 356 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.0021566 57.188 By matching By MS/MS 1 1 1022900 515310 507580 922 173 954 1939;1940 1525 1525 129 1 SNASTLESHETEEPAAKK LKADTSLKSNASTLES TEEPAAKKRKCPESDS K S N K K R 3 0 1 0 0 0 4 0 1 0 1 2 0 0 1 3 2 0 0 0 0 0 18 1 1927.9123 Q9UJA5 Q9UJA5 472 489 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes yes 3 0.014728 28.627 By MS/MS By matching 1 1 370900 215030 155870 923 776 955 1941;1942 1526 1526 0 SNESVDIQDQEEK RSGKWKNKSNESVDIQ DIQDQEEKVVKQECIK K S N E K V 0 0 1 2 0 2 3 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 13 0 1519.6638 Q5UIP0 Q5UIP0 1576 1588 RIF1 Telomere-associated protein RIF1 yes yes 2 0.0067803 67.102 By matching By MS/MS 1 1 1405500 599000 806520 924 648 956 1943;1944 1527 1527 504 1 SNQNGKDSKPSSTPR TPAKNAQKSNQNGKDS SKPSSTPRSKGQESFK K S N P R S 0 1 2 1 0 1 0 1 0 0 0 2 0 0 2 4 1 0 0 0 0 0 15 2 1601.7758 P06748 P06748 207 221 NPM1 Nucleophosmin yes yes 3 0.0080985 54.09 By MS/MS By MS/MS 1 1 605670 329950 275720 925 497 957 1945;1946 1528;1529 1529 74 389;390;788 2 SNSLSEQLAINTSPDAVK GEPALRTKSNSLSEQL NTSPDAVKAKLISRMA K S N V K A 2 0 2 1 0 1 1 0 0 1 2 1 0 0 1 4 1 0 0 1 0 0 18 0 1872.9429 X6RKW4;A0A0A0MT60;Q5T1M5 X6RKW4 369 386 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 1.7377E-05 90.422 By matching By MS/MS 1 1 1315600 604770 710840 926 66 958 1947;1948 1530 1530 48 1 SNSPLPVPPSK SRSRSQSRSNSPLPVP PLPVPPSKARSVSPPP R S N S K A 0 0 1 0 0 0 0 0 0 0 1 1 0 0 4 3 0 0 0 1 0 0 11 0 1121.6081 Q13247 Q13247 301 311 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 2 0.011287 69.229 By matching By MS/MS 1 1 781550 369520 412040 927 610 959 1949;1950 1531 1531 472 1 SPAVATSTAAPPPPSSPLPSK MEVFLQEKSPAVATST PSSPLPSKSTSAPQMS K S P S K S 4 0 0 0 0 0 0 0 0 0 1 1 0 0 7 5 2 0 0 1 0 0 21 0 1959.0313 F8W726;Q14157 F8W726 450 470 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 1.6291E-15 99.991 By MS/MS By MS/MS 2 3 17060000 8641400 8418100 928 311 960 1951;1952;1953;1954;1955 1532;1533;1534;1535 1533 249;250;251 4 SPFSMAASPKLAASPK QISTQGFKSPFSMAAS PKLAASPKPATSPKPL K S P P K P 4 0 0 0 0 0 0 0 0 0 1 2 1 1 3 4 0 0 0 0 0 0 16 1 1588.8283 Q6ZU65 Q6ZU65 1029 1044 UBN2 Ubinuclein-2 yes yes 2 0.012213 41.54 By MS/MS 1 0 0 0 929 671 961 1956 1536 1536 85 1 SPGSPVGEGTGSPPK EKYKAKSRSPGSPVGE EGTGSPPKWQIGEQEF R S P P K W 0 0 0 0 0 0 1 4 0 0 0 1 0 0 4 3 1 0 0 1 0 0 15 0 1352.6572 E7EV99;E7ENY0;P35611;A0A0A0MSR2;H0Y9H2 E7EV99 355 369 ADD1 Alpha-adducin yes no 2 0.0046181 75.998 By MS/MS By matching 1 1 2755900 1230500 1525400 930 228 962 1957;1958 1537 1537 165 1 SPQETYDVYCYVDHLDGDVFHLTVPSK GVRTYGFRSPQETYDV FHLTVPSKFTFEEAAK R S P S K F 0 0 0 4 1 1 1 1 2 0 2 1 0 1 2 2 2 0 3 4 0 0 27 0 3183.4495 Q86W61;D6RGZ6;E9PF17;P13611 Q86W61 234 260 VCAN Versican core protein yes no 4 0.00040364 50.498 By MS/MS By matching 1 1 5386400 3626900 1759400 931 219 963 1959;1960 1538 1538 1 SPQLSDFGLER CISEKSPRSPQLSDFG LSDFGLERYIVSQVLP R S P E R Y 0 1 0 1 0 1 1 1 0 0 2 0 0 1 1 2 0 0 0 0 0 0 11 0 1247.6146 Q8IX90 Q8IX90 155 165 SKA3 Spindle and kinetochore-associated protein 3 yes yes 3 0.01269 41.117 By MS/MS 1 74962 74962 0 932 682 964 1961 1539 1539 1 SPSGGAAGPLLTPSQSLDGSRR PTLELASRSPSGGAAG QSLDGSRRSGYITIGY R S P R R S 2 2 0 1 0 1 0 4 0 0 3 0 0 0 3 5 1 0 0 0 0 0 22 1 2110.0767 Q96CX2 Q96CX2 185 206 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 3 0.0030508 47.088 By MS/MS By matching 1 1 949870 559040 390820 933 716 965 1962;1963 1540 1540 569;570;571 1 SPSGSAFGSQENLR RSRGQLERSPSGSAFG FGSQENLRWRKDMTHW R S P L R W 1 1 1 0 0 1 1 2 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1435.6692 A0A1B0GWE0;Q96N67 A0A1B0GWE0 521 534 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 0.014678 57.034 By MS/MS By matching 1 1 3392600 1500100 1892500 934 114 966 1964;1965 1541 1541 79 1 SPSLSPSPPSPLEK SEKVSPSKSPSLSPSP SPPSPLEKTPLGERSV K S P E K T 0 0 0 0 0 0 1 0 0 0 2 1 0 0 5 5 0 0 0 0 0 0 14 0 1421.7402 P46821 P46821 1256 1269 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 4.9037E-05 100.11 By MS/MS By MS/MS 1 1 1157200 472790 684400 935 558 967 1966;1967 1542;1543;1544;1545 1545 428 4 SPSSCNDLYATVK SIQGDPQRSPSSCNDL NDLYATVKDFEKTPNS R S P V K D 1 0 1 1 1 0 0 0 0 0 1 1 0 0 1 3 1 0 1 1 0 0 13 0 1440.6555 Q9NWQ8 Q9NWQ8 351 363 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 0.0007989 81.017 By matching By MS/MS 1 1 1546400 612350 934060 936 765 968 1968;1969 1546 1546 950 1 SPSSPVPVVKNR IHSFSKERSPSSPVPV PVPVVKNRTQQTQNTL R S P N R T 0 1 1 0 0 0 0 0 0 0 0 1 0 0 3 3 0 0 0 3 0 0 12 1 1265.7092 A2RUB6 A2RUB6 794 805 CCDC66 Coiled-coil domain-containing protein 66 yes yes 2 0.012085 47.712 By MS/MS By matching 1 1 1056100 452930 603190 937 121 969 1970;1971 1547 1547 15 86;87 1 SPVGRSKTEK AKSLAPAKSPVGRSKT VGRSKTEKPTGCSKAQ K S P E K P 0 1 0 0 0 0 1 1 0 0 0 2 0 0 1 2 1 0 0 1 0 0 10 2 1087.5986 Q6ZU69 Q6ZU69 1259 1268 FAM205A Protein FAM205A yes yes 2 0.0098752 59.35 By matching By MS/MS 1 1 646310 340780 305520 938 672 970 1972;1973 1548 1548 831 1 SPVPKSPVEEK VEKPEKAKSPVPKSPV PKSPVEEKGKSPVSKS K S P E K G 0 0 0 0 0 0 2 0 0 0 0 2 0 0 3 2 0 0 0 2 0 0 11 1 1195.6449 E7ESP9;P07197 E7ESP9 615 625 NEFM Neurofilament medium polypeptide yes no 2 0.0070972 95.183 By MS/MS 1 789100 0 789100 939 235 971 1974 1549 1549 173 1 SQDATFSPGSEQAEKSPGPIVSR SPRRMMTRSQDATFSP SPGPIVSRTRSWDSSS R S Q S R T 2 1 0 1 0 2 2 2 0 1 0 1 0 1 3 5 1 0 0 1 0 0 23 1 2374.1401 C9J0I9;Q86WB0 C9J0I9 286 308 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.00030524 63.184 By matching By MS/MS 1 1 9563100 4577600 4985500 940 173 972 1975;1976 1550 1550 130 1 SQDVAVSPQQQQCSK IPKRTDVKSQDVAVSP PQQQQCSKSYVDRHME K S Q S K S 1 0 0 1 1 5 0 0 0 0 0 1 0 0 1 3 0 0 0 2 0 0 15 0 1688.7788 H3BTD6;H3BQ37;H3BPW9;Q96F86 H3BTD6 12 26 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2 0.00107 84.41 By matching By MS/MS 1 1 1741900 852130 889750 941 378 973 1977;1978 1551 1551 294 1 SQSMDIDGVSCEK TQSQSLSRSQSMDIDG IDGVSCEKSMSQVDVD R S Q E K S 0 0 0 2 1 1 1 1 0 1 0 1 1 0 0 3 0 0 0 1 0 0 13 0 1454.6017 O95155 O95155 103 115 UBE4B Ubiquitin conjugation factor E4 B yes yes 2 0.0022546 82.515 By matching By MS/MS 1 1 792220 335790 456430 942 462 974 1979;1980 1552 1552 373 1 SQSSDTEQQSPTSGGGK RSSNPPARSQSSDTEQ SPTSGGGKVAPAQPSE R S Q G K V 0 0 0 1 0 3 1 3 0 0 0 1 0 0 1 5 2 0 0 0 0 0 17 0 1679.7235 E7EX17;P23588 E7EX17 500 516 EIF4B Eukaryotic translation initiation factor 4B yes no 2 9.8691E-07 94.01 By MS/MS By matching 1 1 846590 541920 304670 943 244 975 1981;1982 1553 1553 190 1 SQTTTERDSDTDVEEEELPVENR QRVVLLQRSQTTTERD EELPVENREAVLKDHT R S Q N R E 0 2 1 3 0 1 6 0 0 0 1 0 0 0 1 2 4 0 0 2 0 0 23 1 2678.1791 Q14676 Q14676 445 467 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.0035166 44.05 By MS/MS 1 746050 0 746050 944 619 976 1983 1554 1554 817;818 1 SQWVAPSSVVLHDEGQNEEDVEK VAVELLPKSQWVAPSS QNEEDVEKEEETERML K S Q E K E 1 0 1 2 0 2 4 1 1 0 1 1 0 0 1 3 0 1 0 4 0 0 23 0 2581.1932 F2Z2C0;G3V1J5;Q9Y2L1 F2Z2C0 300 322 DIS3 Exosome complex exonuclease RRP44 yes no 3 0.0086117 41.615 By matching By MS/MS 1 1 2133400 896580 1236900 945 278 977 1984;1985 1555 1555 220;221 1 SRPTSEGSDIESTEPQK TSISKMKRSRPTSEGS IESTEPQKQCSKKKKK R S R Q K Q 0 1 0 1 0 1 3 1 0 1 0 1 0 0 2 4 2 0 0 0 0 0 17 1 1846.8545 D6RFF0;H0YA82;Q4G0J3 D6RFF0 254 270 LARP7 La-related protein 7 yes no 3 0.0057708 55.206 By matching By MS/MS 1 1 1166900 355280 811650 946 217 978 1986;1987 1556 1556 157 1 SRPTSFADELAAR EENTRPKRSRPTSFAD FADELAARIKGDAMGR R S R A R I 3 2 0 1 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 0 0 0 13 1 1419.7106 A0A0A0MT65;A0A087WYF6;F8W7U3;J3KP36;E7ESD2;A0A0A0MR88;A0A096LPC5;Q9Y4E1;Q641Q2 A0A0A0MT65 229 241 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A yes no 2 0.0079095 67.207 By matching By MS/MS 1 1 2677900 1103800 1574000 947 33 979 1988;1989 1557 1557 17 1 SRSDIDVNAAAGAK SLPGSLQRSRSDIDVN VNAAAGAKAHHAAGQS R S R A K A 4 1 1 2 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 1 1373.6899 B3KR06;E7ENG2;E3W994;J3KR49;A0A0U1RQI6;E7ERI8;E7EW49;O75122 B3KR06 374 387 CLASP2 CLIP-associating protein 2 yes no 2;3 0.0018347 71.888 By MS/MS By MS/MS 2 2 9100200 4474500 4625800 948 93 980 1990;1991;1992;1993 1558;1559;1560;1561 1561 65;66 4 SRSGEGEVSGLMR PHVSGVKRSRSGEGEV GEVSGLMRKVPRVSLE R S R M R K 0 2 0 0 0 0 2 3 0 0 1 0 1 0 0 3 0 0 0 1 0 0 13 1 1363.6514 M0R0K9;Q13263 M0R0K9 96 108 TRIM28 Transcription intermediary factor 1-beta yes no 3 0.0034532 72.932 By MS/MS By MS/MS 1 1 1764600 723620 1041000 949 430 981 1994;1995 1562;1563 1563 336;337 2 SRSPLELEPEAK VLRPRNKRSRSPLELE LELEPEAKKLCAKGSD R S R A K K 1 1 0 0 0 0 3 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 12 1 1354.7092 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 24 35 DDB2 DNA damage-binding protein 2 yes no 2;3 0.0050704 88.706 By MS/MS By MS/MS 2 2 2707300 1293500 1413800 950 13 982 1996;1997;1998;1999 1564;1565;1566 1564 5 3 SRSPPPVSK SRSRSRSRSRSPPPVS RSPPPVSKRESKSRSR R S R S K R 0 1 0 0 0 0 0 0 0 0 0 1 0 0 3 3 0 0 0 1 0 0 9 1 953.52943 Q01130 Q01130 189 197 SRSF2 Serine/arginine-rich splicing factor 2 yes yes 2 0.011335 70.685 By MS/MS By matching 1 1 2008700 882720 1126000 951 587 983 2000;2001 1567 1567 449;450 1 SRSRSPHYR SSSRRRSRSRSRSPHY RSRSPHYRH_______ R S R Y R H 0 3 0 0 0 0 0 0 1 0 0 0 0 0 1 3 0 0 1 0 0 0 9 2 1144.585 K7EP11;F5H0Q6;A0A0A0MQS2;Q8N2M8 K7EP11 122 130 CLASRP CLK4-associating serine/arginine rich protein yes no 2 0.014846 45.158 By MS/MS By matching 1 1 1402200 764440 637750 952 53 984 2002;2003 1568 1568 35;864 1 SRSSDIVSSVR SYPERLVRSRSSDIVS SDIVSSVRRPMSDPSW R S R V R R 0 2 0 1 0 0 0 0 0 1 0 0 0 0 0 5 0 0 0 2 0 0 11 1 1191.6208 H0Y4E7;H0Y7I9;C9IZ08;F8W9S7;Q14C86 H0Y4E7 737 747 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 3 0.0075328 62.357 By matching By MS/MS 1 1 1310100 559730 750370 953 170 985 2004;2005 1569 1569 125;126 1 SRTPPSAPSQSR PPLLDRARSRTPPSAP PSAPSQSRMTSERAPS R S R S R M 1 2 0 0 0 1 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 12 1 1269.6426 Q9UQ35;I3L3Q8 Q9UQ35 2407 2418 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0033202 71.268 By matching By MS/MS 1 1 668310 286020 382290 954 787 986 2006;2007 1570 1570 649 1 SRTPSASNDDQQE EQLRSQIRSRTPSASN ASNDDQQE________ R S R Q E - 1 1 1 2 0 2 1 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 13 1 1433.6019 O43765 O43765 301 313 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 2 1.59E-09 121.92 By MS/MS 1 2589900 2589900 0 955 449 987 2008 1571 1571 362 1 SRVSSPLASFLQQQR FPLEPAQKSRVSSPLA ASFLQQQRSASSLEWE K S R Q R S 1 2 0 0 0 3 0 0 0 0 2 0 0 1 1 4 0 0 0 1 0 0 15 1 1702.9115 E9PPH6;Q8NEV8 E9PPH6 1688 1702 EXPH5 Exophilin-5 yes no 3 0.0098523 45.115 By MS/MS 1 0 0 0 956 274 988 2009 1572 1572 170 211;212;213;214 1 SSGSGSSVADERVDYVVVDQQK STPPRKQKSSGSGSSV YVVVDQQKTLALKSTR K S S Q K T 1 1 0 3 0 2 1 2 0 0 0 1 0 0 0 5 0 0 1 5 0 0 22 1 2311.0928 B7Z3B9;Q13480 B7Z3B9 542 563 GAB1 GRB2-associated-binding protein 1 yes no 3 1.5429E-12 94.973 By matching By MS/MS 1 1 1819900 1085800 734120 957 161 989 2010;2011 1573;1574 1574 878 2 SSGSPYGGGYGSGGGSGGYGSR KGGSFGGRSSGSPYGG GSGGYGSRRF______ R S S S R R 0 1 0 0 0 0 0 11 0 0 0 0 0 0 1 6 0 0 3 0 0 0 22 0 1909.7827 H7C1J8;P51991 H7C1J8 92 113 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 3 0.0011604 54.828 By MS/MS By matching 1 1 1650100 868080 782070 958 394 990 2012;2013 1575 1575 905 1 SSLGQSASETEEDTVSVSKK EEMETDARSSLGQSAS DTVSVSKKEKNRKRRN R S S K K E 1 0 0 1 0 1 3 1 0 0 1 2 0 0 0 6 2 0 0 2 0 0 20 1 2067.9808 E9PJ04;H0YCG1;E9PPJ0;Q13435 E9PJ04 300 319 SF3B2 Splicing factor 3B subunit 2 yes no 2 0.0050735 49.482 By matching By MS/MS 1 1 1717900 187880 1530000 959 258 991 2014;2015 1576 1576 199;200;201 1 SSMSGLHLVK DGLALHIRSSMSGLHL MSGLHLVKQGRDRKKI R S S V K Q 0 0 0 0 0 0 0 1 1 0 2 1 1 0 0 3 0 0 0 1 0 0 10 0 1057.559 A0A0C4DGT1;Q13085 A0A0C4DGT1 77 86 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 2 0.0086758 82.505 By matching By MS/MS 1 1 1052100 345910 706150 960 81 992 2016;2017 1577 1577 57 1 SSPLGQNDNSEYVPMLPGK FSLPNPFRSSPLGQND YVPMLPGKFLGRGLDK R S S G K F 0 0 2 1 0 1 1 2 0 0 2 1 1 0 3 3 0 0 1 1 0 0 19 0 2031.9572 O14654 O14654 817 835 IRS4 Insulin receptor substrate 4 yes yes 2 0.0056939 70.412 By matching By MS/MS 1 1 4147300 1799100 2348100 961 441 993 2018;2019 1578 1578 49 354 1 SSPNVANQPPSPGGK MKNRADHRSSPNVANQ QPPSPGGKSAYASGTT R S S G K S 1 0 2 0 0 1 0 2 0 0 0 1 0 0 4 3 0 0 0 1 0 0 15 0 1435.7056 Q5TIG5;A8MQ02;J3KN01;P55196 Q5TIG5 1172 1186 MLLT4 Afadin yes no 2 0.0023283 79.471 By matching By MS/MS 1 2 2074600 1009900 1064700 962 128 994;995 2020;2021;2022 1579;1580 1579 96;97 2 SSVQQQPPPPR ________________ QQQPPPPRRVTNVGSL M S S P R R 0 1 0 0 0 3 0 0 0 0 0 0 0 0 4 2 0 0 0 1 0 0 11 0 1219.6309 O00401 O00401 2 12 WASL Neural Wiskott-Aldrich syndrome protein yes yes 2 0.014891 57.859 By matching By MS/MS 1 1 45410000 21771000 23640000 963 435 996 2023;2024 1581 1581 199 345 1 STAGDTHLGGEDFDNR EDGIFEVKSTAGDTHL GGEDFDNRMVNHFIAE K S T N R M 1 1 1 3 0 0 1 3 1 0 1 0 0 1 0 1 2 0 0 0 0 0 16 0 1690.7183 E9PN89;E9PKE3;P11142;P54652 E9PN89 161 176 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 3 0.0095555 51.888 By matching By MS/MS 1 1 1770000 796420 973550 964 265 997 2025;2026 1582 1582 1 STAPGGIPNPEK LPSNGVPRSTAPGGIP GGIPNPEKKTNCETQC R S T E K K 1 0 1 0 0 0 1 2 0 1 0 1 0 0 3 1 1 0 0 0 0 0 12 0 1166.5932 Q8WXS3 Q8WXS3 103 114 BAALC Brain and acute leukemia cytoplasmic protein yes yes 2 0.0071151 61.65 By matching By MS/MS 1 1 11745000 4536200 7208400 965 706 998 2027;2028 1583 1583 102 1 STATLPLSFKEATLAKR DVNSSVGKSTATLPLS KEATLAKRFALKTRSQ K S T K R F 3 1 0 0 0 0 1 0 0 0 3 2 0 1 1 2 3 0 0 0 0 0 17 2 1833.036 P20309 P20309 450 466 CHRM3 Muscarinic acetylcholine receptor M3 yes yes 2 0.012221 41.86 By MS/MS 1 0 0 0 966 535 999 2029 1584 1584 794;795 1 STENSAGSQGCDK TLLDEPFRSTENSAGS AGSQGCDKNMSGWYRF R S T D K N 1 0 1 1 1 1 1 2 0 0 0 1 0 0 0 3 1 0 0 0 0 0 13 0 1339.531 P55259;I3L2Z7 P55259 75 87 GP2 Pancreatic secretory granule membrane major glycoprotein GP2 yes no 2 0.012307 43.512 By MS/MS 1 0 0 0 967 574 1000 2030 1585 1585 85;211 446;447;805 1 STIVIPPTDSK S T S K 0 0 0 1 0 0 0 0 0 2 0 1 0 0 2 2 2 0 0 1 0 0 11 0 1156.634 REV__Q8IZF6 yes yes 2 0.011606 68.846 By MS/MS By matching 2 1 591190 364250 226940 + 968 808 1001 2031;2032;2033 1586 1586 667 1 STPGSVIAQK SSKFSKPKSTPGSVIA PGSVIAQKLEKMHPKH K S T Q K L 1 0 0 0 0 1 0 1 0 1 0 1 0 0 1 2 1 0 0 1 0 0 10 0 986.53966 J3KQU2;Q05C16 J3KQU2 161 170 LRRC63 Leucine-rich repeat-containing protein 63 yes no 2 0.012602 78.098 By MS/MS 1 7903400 7903400 0 969 410 1002 2034 1587 1587 320 1 STSESTAALGCLVK FPLAPCSRSTSESTAA AALGCLVKDYFPEPVT R S T V K D 2 0 0 0 1 0 1 1 0 0 2 1 0 0 0 3 2 0 0 1 0 0 14 0 1422.7024 P01859;P01861 P01859 17 30 IGHG2;IGHG4 Ig gamma-2 chain C region;Ig gamma-4 chain C region no no 2 0.0087806 66.92 By MS/MS 1 0 0 0 970 481;482 1003 2035 1588 1588 1 STSTPTSPGPR ________________ TPTSPGPRTHSTPSIP K S T P R T 0 1 0 0 0 0 0 1 0 0 0 0 0 0 3 3 3 0 0 0 0 0 11 0 1086.5306 H3BRB0;A0A0C4DGL7;H3BUF6;Q8WWM7 H3BRB0 3 13 ATXN2L Ataxin-2-like protein yes no 2 0.0058612 92.112 By MS/MS By MS/MS 1 1 1809800 811350 998430 971 80 1004 2036;2037 1589;1590;1591 1589 55;56 3 STTSQASPAQR MTPHSGPRSTTSQASP SQASPAQRDTAQAAST R S T Q R D 2 1 0 0 0 2 0 0 0 0 0 0 0 0 1 3 2 0 0 0 0 0 11 0 1132.5473 Q9H2D6 Q9H2D6 254 264 TRIOBP TRIO and F-actin-binding protein yes yes 2 0.013892 51.066 By MS/MS By matching 1 1 378200 119840 258360 972 747 1005 2038;2039 1592 1592 239 603;846 1 SVENLPECGITHEQR ENRIRSTRSVENLPEC CGITHEQRAGSFSTVP R S V Q R A 0 1 1 0 1 1 3 1 1 1 1 0 0 0 1 1 1 0 0 1 0 0 15 0 1767.821 F8W860;A0A0B4J1S8;Q9UBF8 F8W860 96 110 PI4KB Phosphatidylinositol 4-kinase beta yes no 2;3 0.0012342 81.428 By MS/MS By MS/MS 2 2 5833900 2718000 3115900 973 73 1006 2040;2041;2042;2043 1593;1594 1594 52 2 SVLGQLGITK ITGTYDLKSVLGQLGI LGQLGITKVFSNGADL K S V T K V 0 0 0 0 0 1 0 2 0 1 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1014.6073 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 325 334 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.010938 68.371 By MS/MS By matching 1 1 926180 482920 443260 974 1 1007 2044;2045 1595 1595 1 SVQEGENPDDGVR MSKRKRKRSVQEGENP ENPDDGVRGSPPEDYR R S V V R G 0 1 1 2 0 1 2 2 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 0 1400.6168 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 17 29 RBM34 RNA-binding protein 34 yes no 2 0.0022678 82.494 By matching By MS/MS 1 1 980510 438780 541730 975 117 1008 2046;2047 1596 1596 83 1 SVSSFPVPQDNVDTHPGSGK ISRAATRRSVSSFPVP DTHPGSGKEVRVPATA R S V G K E 0 0 1 2 0 1 0 2 1 0 0 1 0 1 3 4 1 0 0 3 0 0 20 0 2053.9705 C9JAY7;E7EVC7;Q676U5 C9JAY7 124 143 ATG16L1 Autophagy-related protein 16-1 yes no 3 0.0083729 46.154 By MS/MS By MS/MS 1 1 1193400 639440 553930 976 181 1009 2048;2049 1597;1598 1598 137;138 2 SVVSDLEADDVK NKELKPQKSVVSDLEA DLEADDVKGSVPLSSS K S V V K G 1 0 0 3 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 12 0 1275.6194 P11388 P11388 1374 1385 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0083407 75.462 By MS/MS By matching 1 1 3211200 1186700 2024500 977 519 1010 2050;2051 1599 1599 403 1 SVYAHFPINVVIQENGSLVEIR LGFRYKMRSVYAHFPI NGSLVEIRNFLGEKYI R S V I R N 1 1 2 0 0 1 2 1 1 3 1 0 0 1 1 2 0 0 1 4 0 0 22 0 2483.3173 D6RAN4;H0Y9V9;P32969;E7ESE0 D6RAN4 94 115 RPL9 60S ribosomal protein L9 yes no 3 6.9768E-33 122.19 By MS/MS By MS/MS 2 2 21568000 7153300 14415000 978 212 1011;1012 2052;2053;2054;2055 1600;1601;1602;1603;1604 1602 26 5 SVYITFSDYESVQGLPAFR VFPSDFCRSVYITFSD VQGLPAFRYKVPAEIL R S V F R Y 1 1 0 1 0 1 1 1 0 1 1 0 0 2 1 3 1 0 2 2 0 0 19 0 2178.0633 Q14108 Q14108 276 294 SCARB2 Lysosome membrane protein 2 yes yes 2;3 3.7657E-06 88.163 By MS/MS By MS/MS 1 1 4617900 3411200 1206700 979 614 1013 2056;2057 1605;1606 1605 2 SWDSSSPVDRPEPEAASPTTR GPIVSRTRSWDSSSPV EAASPTTRTRPVTRSM R S W T R T 2 2 0 2 0 0 2 0 0 0 0 0 0 0 4 5 2 1 0 1 0 0 21 1 2271.0404 C9J0I9;Q86WB0 C9J0I9 311 331 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.0062761 53.188 By matching By MS/MS 1 1 2280300 819450 1460800 980 173 1014 2058;2059 1607 1607 131 1 SYCYYFNEDR PEGTNAYRSYCYYFNE CYYFNEDRETWVDADL R S Y D R E 0 1 1 1 1 0 1 0 0 0 0 0 0 1 0 1 0 0 3 0 0 0 10 0 1415.5452 P05451 P05451 45 54 REG1A Lithostathine-1-alpha yes yes 2 0.0032654 89.355 By MS/MS By matching 1 1 1046300 456760 589570 981 493 1015 2060;2061 1608 1608 1 SYEAYVLNIVR SFRPNDPKSYEAYVLN AYVLNIVRFLEKYKDS K S Y V R F 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 2 2 0 0 11 0 1325.698 V9GYR2;P05026 V9GYR2 41 51 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 2 0.0026137 83.948 By matching By MS/MS 1 1 1573500 668460 905020 982 492 1016 2062;2063 1609 1609 1 SYECQAQQTISLASSDPQK ALVTPAGKSYECQAQQ LASSDPQKTVTMILSA K S Y Q K T 2 0 0 1 1 4 1 0 0 1 1 1 0 0 1 4 1 0 1 0 0 0 19 0 2139.9743 Q9UJQ1 Q9UJQ1 179 197 LAMP5 Lysosome-associated membrane glycoprotein 5 yes yes 3 0.012804 41.359 By MS/MS 1 0 0 0 983 777 1017 2064 1610 1610 250 633;634;954 1 SYELPDGQVITIGNER ASSSSLEKSYELPDGQ VITIGNERFRCPEALF K S Y E R F 0 1 1 1 0 1 2 2 0 2 1 0 0 0 1 1 1 0 1 1 0 0 16 0 1789.8846 P63261;P60709;Q6S8J3;P68133;P68032;A5A3E0;Q9BYX7;P63267;P62736;Q562R1 P63261 239 254 ACTG1;ACTB;POTEE;ACTA1;ACTC1;POTEF;POTEKP;ACTG2;ACTA2;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 yes no 2 0.009433 53.967 By MS/MS By MS/MS 1 1 3571500 1698900 1872500 984 576 1018 2065;2066 1611;1612 1611 2 SYSPDGKESPSDKK KKDKSRKRSYSPDGKE KESPSDKKSKTDGSQK R S Y K K S 0 0 0 2 0 0 1 1 0 0 0 3 0 0 2 4 0 0 1 0 0 0 14 2 1523.7104 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87 D6REM6 596 609 MATR3 Matrin-3 yes no 2 7.3068E-05 97.203 By MS/MS By MS/MS 2 2 6935100 3819900 3115200 985 91 1019;1020 2067;2068;2069;2070 1613;1614;1615;1616;1617;1618 1616 63;64 6 TAADVVSPGANSVDSR TEKVKDPKTAADVVSP GANSVDSRVQRPKEES K T A S R V 3 1 1 2 0 0 0 1 0 0 0 0 0 0 1 3 1 0 0 3 0 0 16 0 1544.7431 Q01804 Q01804 1000 1015 OTUD4 OTU domain-containing protein 4 yes yes 2 0.00039544 90.793 By MS/MS By MS/MS 1 1 916300 461520 454780 986 589 1021 2071;2072 1619;1620 1620 452 2 TAEYDVAYGESHLFR IRVLVTGKTAEYDVAY YGESHLFRVPSYQALL K T A F R V 2 1 0 1 0 0 2 1 1 0 1 0 0 1 0 1 1 0 2 1 0 0 15 0 1756.8057 A0A087X0S5;P12109 A0A087X0S5 989 1003 COL6A1 Collagen alpha-1(VI) chain yes no 3 0.01035 39.005 By MS/MS By MS/MS 1 1 678580 416870 261710 987 43 1022 2073;2074 1621;1622 1621 2 TAFYNEDDSEEEQR RTRNQGRRTAFYNEDD DDSEEEQRQLLFEDTS R T A Q R Q 1 1 1 2 0 1 4 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 14 0 1731.686 Q8WWQ0 Q8WWQ0 1775 1788 PHIP PH-interacting protein yes yes 2 1.278E-09 109.07 By matching By MS/MS 1 1 1720100 651890 1068200 988 705 1023 2075;2076 1623 1623 559 1 TALPAQSAATLPAR PTSDRKAKTALPAQSA SAATLPARTQETPSAQ K T A A R T 5 1 0 0 0 1 0 0 0 0 2 0 0 0 2 1 2 0 0 0 0 0 14 0 1366.7569 A0A087WUZ3;Q01082 A0A087WUZ3 2180 2193 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.0049153 63.682 By MS/MS By matching 1 1 5512200 2613200 2899000 989 22 1024 2077;2078 1624 1624 674 1 TALSANRVNSININQGSITFAGGPGRDGTIDFTPGSELLITK HVIETLTKTALSANRV GSELLITKAKNGHLAV K T A T K A 3 2 4 2 0 1 1 6 0 5 3 1 0 2 2 4 5 0 0 1 0 0 42 2 4302.2244 F5H6E2;O00159 F5H6E2 982 1023 MYO1C Unconventional myosin-Ic yes no 4 0.014386 15.076 By MS/MS 1 835030 835030 0 990 295 1025 2079 1625 1625 1 TAQVPSPPR ITIDDPVRTAQVPSPP AQVPSPPRGKISNIVH R T A P R G 1 1 0 0 0 1 0 0 0 0 0 0 0 0 3 1 1 0 0 1 0 0 9 0 951.51378 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 949 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.010658 119.34 By MS/MS By MS/MS 1 1 4170000 1951000 2219000 991 233 1026 2080;2081 1626;1627;1628 1628 172 3 TASFSESRADEVAPAK TSTPAPSRTASFSESR ADEVAPAKKAKPAMPQ R T A A K K 4 1 0 1 0 0 2 0 0 0 0 1 0 1 1 3 1 0 0 1 0 0 16 1 1664.8006 P53396 P53396 453 468 ACLY ATP-citrate synthase yes yes 3 0.0068104 52.731 By MS/MS By matching 1 1 1817300 961340 855960 992 572 1027 2082;2083 1629 1629 444 1 TASGSSVTSLDGTR MTRLMRSRTASGSSVT VTSLDGTRSRSHTSEG R T A T R S 1 1 0 1 0 0 0 2 0 0 1 0 0 0 0 4 3 0 0 1 0 0 14 0 1337.6423 E5RJY1;E7ESM1;Q92597 E5RJY1 37 50 NDRG1 Protein NDRG1 yes no 2 0.0020029 82.651 By MS/MS By MS/MS 1 1 3892100 1901300 1990800 993 226 1028 2084;2085 1630;1631 1630 163;724 2 TCPLCRSVAVDTLR CLWLDRERTCPLCRSV SVAVDTLRCWKDGATS R T C L R C 1 2 0 1 2 0 0 0 0 0 2 0 0 0 1 1 2 0 0 2 0 0 14 1 1646.8232 Q96EX2 Q96EX2 417 430 RNFT2 RING finger and transmembrane domain-containing protein 2 yes yes 3 0.0099344 50.46 By MS/MS 1 0 0 0 994 718 1029 2086 1632 1632 573;838 1 TDCPIHVYFVLDTSESVTMQSPTDILLFHMK RNNNCPEKTDCPIHVY DILLFHMKQFVPQFIS K T D M K Q 0 0 0 3 1 1 1 0 2 2 3 1 2 2 2 3 4 0 1 3 0 0 31 0 3623.735 P12110;C9JH44 P12110 41 71 COL6A2 Collagen alpha-2(VI) chain yes no 4 1.204E-62 115.06 By MS/MS By MS/MS 1 1 21658000 6479800 15178000 995 520 1030 2087;2088 1633;1634 1634 64;65 2 TDGSISGDRQPVTVADYISR RRRNRGNRTDGSISGD TVADYISRAESQSRQR R T D S R A 1 2 0 3 0 1 0 2 0 2 0 0 0 0 1 3 2 0 1 2 0 0 20 1 2136.0447 P51116 P51116 598 617 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 0.01212 45.735 By matching By MS/MS 1 1 1158900 570870 588030 996 564 1031 2089;2090 1635 1635 434 1 TDILCNLPSYKAKIR SLAEEALRTDILCNLP PSYKAKIRAFQHAFST R T D I R A 1 1 1 1 1 0 0 0 0 2 2 2 0 0 1 1 1 0 1 0 0 0 15 2 1790.9713 P0C2W1 P0C2W1 94 108 FBXO45 F-box/SPRY domain-containing protein 1 yes yes 3 0.014187 45.213 By MS/MS 1 0 0 0 997 512 1032 2091 1636 1636 401;920 1 TDSREDEISPPPPNPVVK NLQKAGTRTDSREDEI PPPNPVVKGRRRRGAI R T D V K G 0 1 1 2 0 0 2 0 0 1 0 1 0 0 5 2 1 0 0 2 0 0 18 1 1975.9851 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644 K7EMU2 75 92 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 3 0.0087824 51.431 By MS/MS By matching 1 1 3220300 1420800 1799500 998 418 1033 2092;2093 1637 1637 329 1 TEEIFYYYDTNTGK ATRTMNTRTEEIFYYY YYDTNTGKEGKLDIVM R T E G K E 0 0 1 1 0 0 2 1 0 1 0 1 0 1 0 0 3 0 3 0 0 0 14 0 1742.7675 Q6UX06 Q6UX06 450 463 OLFM4 Olfactomedin-4 yes yes 2;3 9.577E-06 99.844 By MS/MS By MS/MS 3 4 98885000 50799000 48086000 999 668 1034;1035 2094;2095;2096;2097;2098;2099;2100 1638;1639;1640;1641;1642 1639 92 5 TEIIILATR EVRVTPTRTEIIILAT EIIILATRTQNVLGEK R T E T R T 1 1 0 0 0 0 1 0 0 3 1 0 0 0 0 0 2 0 0 0 0 0 9 0 1028.623 E9PPU1;H0YEU2;E9PL09;P23396;E9PQ96;E9PJH4;F2Z2S8;H0YF32;E9PK82;H0YCJ7 E9PPU1 46 54 RPS3 40S ribosomal protein S3 yes no 2 0.010205 85.67 By MS/MS By matching 1 1 775650 401210 374440 1000 267 1036 2101;2102 1643 1643 1 TEIMSPLYQDEAPK QTPPSCLKTEIMSPLY LYQDEAPKGTEASSGT K T E P K G 1 0 0 1 0 1 2 0 0 1 1 1 1 0 2 1 1 0 1 0 0 0 14 0 1620.7705 Q8IY81 Q8IY81 580 593 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.014412 57.348 By matching By MS/MS 1 1 475210 220610 254610 1001 684 1037 2103;2104 1644 1644 537 1 TFHIFYYLLSGAGEHLK IRQAKEERTFHIFYYL SGAGEHLKTDLLLEPY R T F L K T 1 0 0 0 0 0 1 2 2 1 3 1 0 2 0 1 1 0 2 0 0 0 17 0 1995.0254 P35579 P35579 273 289 MYH9 Myosin-9 yes yes 3 0.00476 46.89 By matching By MS/MS 1 1 1964900 937450 1027500 1002 551 1038 2105;2106 1645 1645 1 TFSHELSDFGLESTAGEIPVVAIR NFAVASRKTFSHELSD EIPVVAIRTAKGEKFV K T F I R T 2 1 0 1 0 0 3 2 1 2 2 0 0 2 1 3 2 0 0 2 0 0 24 0 2574.2966 P30101 P30101 306 329 PDIA3 Protein disulfide-isomerase A3 yes yes 3 0.0078339 39.171 By matching By MS/MS 1 1 3748900 1957800 1791200 1003 547 1039 2107;2108 1646 1646 1 TFVNITPAEVGVLVGK VWAAVPGKTFVNITPA EVGVLVGKDRSSFYVN K T F G K D 1 0 1 0 0 0 1 2 0 1 1 1 0 1 1 0 2 0 0 4 0 0 16 0 1642.9294 I3L3D5;P07737 I3L3D5 118 133 PFN1 Profilin-1 yes no 2 0.00033845 87.216 By MS/MS By MS/MS 1 1 2949100 1119200 1829900 1004 403 1040 2109;2110 1647;1648 1648 2 TGAESKITALEQK RDHVIASKTGAESKIT KITALEQKEQELQALI K T G Q K E 2 0 0 0 0 1 2 1 0 1 1 2 0 0 0 1 2 0 0 0 0 0 13 1 1374.7355 H0YE54;Q92805 H0YE54 28 40 GOLGA1 Golgin subfamily A member 1 yes no 2 0.013895 41.689 By MS/MS 1 0 0 0 1005 359 1041 2111 1649 1649 284;760 1 TGNGSATTPIQVTIYHTYK SPITVSGRTGNGSATT VTIYHTYKSDLKVDLV R T G Y K S 1 0 1 0 0 1 0 2 1 2 0 1 0 0 1 1 5 0 2 1 0 0 19 0 2051.0324 CON__P15636 CON__P15636 586 604 yes yes 3 0.010135 46.621 By MS/MS 1 0 0 0 + 1006 204 1042 2112 1650 1650 24;161 720 1 TGSESSQTGTSTTSSR TQERERSRTGSESSQT GTSTTSSRSKSDQDAR R T G S R S 0 1 0 0 0 1 1 2 0 0 0 0 0 0 0 6 5 0 0 0 0 0 16 0 1572.6863 E7EX17;P23588 E7EX17 420 435 EIF4B Eukaryotic translation initiation factor 4B yes no 2 0.0057825 60.631 By MS/MS By matching 1 1 1800000 972430 827520 1007 244 1043 2113;2114 1651 1651 729 1 TGSTSSKEDDYESDAATIVQK VGSAQQVRTGSTSSKE DAATIVQKCLEIYDMI R T G Q K C 2 0 0 3 0 1 2 1 0 1 0 2 0 0 0 4 3 0 1 1 0 0 21 1 2231.0077 Q5T4S7 Q5T4S7 360 380 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 3 2.2432E-07 83.423 By matching By MS/MS 1 1 2535800 1432400 1103400 1008 647 1044 2115;2116 1652 1652 823 1 TGSYGALAEITASK TWRLGLRKTGSYGALA LAEITASKEGQKEKDT K T G S K E 3 0 0 0 0 0 1 2 0 1 1 1 0 0 0 2 2 0 1 0 0 0 14 0 1367.6933 H0YIS4;H0YHI8;F8VZN8;O14974 H0YIS4 138 151 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.0015787 62.924 By matching By MS/MS 1 1 1268300 636580 631720 1009 309 1045 2117;2118 1653 1653 745;896 1 TIEYLEEVAITFAK GLKPPEERTIEYLEEV EVAITFAKGLADKKIS R T I A K G 2 0 0 0 0 0 3 0 0 2 1 1 0 1 0 0 2 0 1 1 0 0 14 0 1625.8552 P40939 P40939 236 249 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0013053 90.434 By MS/MS 1 1317900 0 1317900 1010 554 1046 2119 1654 1654 1 TIQAGSQAMAGLAILANMLVPQG LLSFLGRRTIQAGSQA ANMLVPQG________ R T I Q G - 5 0 1 0 0 3 0 3 0 2 3 0 2 0 1 1 1 0 0 1 0 0 23 0 2254.1814 H7C0B7 H7C0B7 51 73 SLC22A11 yes yes 3 0.0072095 40.622 By MS/MS 1 58645000 58645000 0 1011 391 1047 2120 1655 1655 50;188;189 40 1 TIQEVLEEQSEDEDREAK ARKQLPKRTIQEVLEE EDEDREAKRKKEEEEE R T I A K R 1 1 0 2 0 2 6 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 18 1 2146.9866 M0R0Q7;P18858 M0R0Q7 132 149 LIG1 DNA ligase;DNA ligase 1 yes no 2 0.00043814 75.91 By MS/MS By MS/MS 1 1 2709500 1070100 1639400 1012 432 1048 2121;2122 1656;1657 1657 340 2 TITLEVEPSDTIENVK FVKTLTGKTITLEVEP SDTIENVKAKIQDKEG K T I V K A 0 0 1 1 0 0 3 0 0 2 1 1 0 0 1 1 3 0 0 2 0 0 16 0 1786.92 J3QSA3;F5GZ39;M0R1V7;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5PY61;Q96C32;P62987;P62979;P0CG47;P0CG48 J3QSA3 12 27 UBB;UBC;UBA52;RPS27A Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 2 0.0014234 65.695 By MS/MS By MS/MS 1 1 2264100 1126700 1137300 1013 149 1049 2123;2124 1658;1659 1659 2 TKFASDDEHDEHDENGATGPVKR KVQFQGKKTKFASDDE GATGPVKRAREETDKE K T K K R A 2 1 1 4 0 0 3 2 2 0 0 2 0 1 1 1 2 0 0 1 0 0 23 2 2554.132 P05455 P05455 362 384 SSB Lupus La protein yes yes 4 5.0713E-12 83.065 By MS/MS By MS/MS 3 3 18821000 10887000 7934800 1014 494 1050;1051 2125;2126;2127;2128;2129;2130 1660;1661;1662;1663;1664 1664 73 387 5 TLCLLILDPGCPSREMQK GIEEKKNRTLCLLILD CPSREMQKLLKQDIEA R T L Q K L 0 1 0 1 2 1 1 1 0 1 4 1 1 0 2 1 1 0 0 0 0 0 18 1 2130.0636 Q96AP4 Q96AP4 505 522 ZUFSP Zinc finger with UFM1-specific peptidase domain protein yes yes 3 0.014927 34.909 By MS/MS 1 0 0 0 1015 714 1052 2131 1665 1665 1 TLHCEGTEINSDDEQESK PFKTKKIKTLHCEGTE SDDEQESKEVEETATA K T L S K E 0 0 1 2 1 1 4 1 1 1 1 1 0 0 0 2 2 0 0 0 0 0 18 0 2090.8699 H0Y9Z8;Q9BPX3 H0Y9Z8 229 246 NCAPG Condensin complex subunit 3 yes no 3 0.0032123 57.806 By MS/MS By MS/MS 1 1 4173200 1732200 2441000 1016 352 1053 2132;2133 1666;1667 1666 279;280 2 TLHTWQKCSNR GMWIWSAKTLHTWQKC TWQKCSNRLVNSGKVK K T L N R L 0 1 1 0 1 1 0 0 1 0 1 1 0 0 0 1 2 1 0 0 0 0 11 1 1429.6885 Q9ULV1 Q9ULV1 500 510 FZD4 Frizzled-4 yes yes 2 0.014347 44.193 By MS/MS 1 458380 458380 0 1017 782 1054 2134 1668 1668 115 638;855 1 TLNAETPKSSPLPAK LLDEEVSRTLNAETPK KSSPLPAKGRDPVEIL R T L A K G 2 0 1 0 0 0 1 0 0 0 2 2 0 0 3 2 2 0 0 0 0 0 15 1 1552.8461 Q7L2J0 Q7L2J0 208 222 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2;3 0.0016741 87.824 By MS/MS By MS/MS 2 2 2723100 1472600 1250500 1018 674 1055 2135;2136;2137;2138 1669;1670 1669 522;523 2 TLNNDIMLIK RHPQYDRKTLNNDIML NNDIMLIKLSSRAVIN K T L I K L 0 0 2 1 0 0 0 0 0 2 2 1 1 0 0 0 1 0 0 0 0 0 10 0 1173.6427 H0Y8D1;A6XGL3;CON__P07477;A0A087WW55;E7EQ64;P07477 H0Y8D1 53 62 PRSS1 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2 yes no 2 0.00038547 125.82 By MS/MS By MS/MS 2 2 13695000 3910200 9785300 + 1019 27 1056;1057 2139;2140;2141;2142 1671;1672;1673 1672 5 3 TLNQPDSQLQLTTGNGLFLSEGLK EGFQELLRTLNQPDSQ LFLSEGLKLVDKFLED R T L L K L 0 0 2 1 0 3 1 3 0 0 6 1 0 1 1 2 3 0 0 0 0 0 24 0 2573.3337 A0A0G2JRN3;A0A024R6I7;P01009;G3V2B9;G3V544 A0A0G2JRN3 126 149 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 3 1.279E-17 93.767 By matching By MS/MS 1 2 8293900 2912200 5381800 1020 1 1058;1059 2143;2144;2145 1674;1675 1674 0 2 TLQELKKLTISEQNIQR KQAEAVLKTLQELKKL ISEQNIQRANLFNKLV K T L Q R A 0 1 1 0 0 3 2 0 0 2 3 2 0 0 0 1 2 0 0 0 0 0 17 2 2041.1532 A8MUN2;P04114 A8MUN2 328 344 APOB Apolipoprotein B-100;Apolipoprotein B-48 yes no 4 0.0099333 41.482 By MS/MS 1 1109400 1109400 0 1021 130 1060 2146 1676 1676 143 100;702 1 TLQKINESR LKEIETQKTLQKINES LQKINESRSWFFERIN K T L S R S 0 1 1 0 0 1 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 9 1 1087.5986 O00370 O00370 355 363 LINE-1 retrotransposable element ORF2 protein;Reverse transcriptase;Endonuclease yes yes 2 0.003179 99.973 By MS/MS By MS/MS 1 1 1375600 739430 636120 1022 434 1061 2147;2148 1677;1678;1679 1678 56;198 344 3 TLSDESIYNSQR TSRRALHRTLSDESIY ESIYNSQREHFFTSRA R T L Q R E 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 3 1 0 1 0 0 0 12 0 1411.6579 F5GYF8;O43166 F5GYF8 1037 1048 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 0.0063742 55.064 By matching By MS/MS 1 1 681320 395840 285480 1023 284 1062 2149;2150 1680 1680 892 1 TLSEVDYAPAGPAR CSVLQMAKTLSEVDYA YAPAGPARSALLPGPL K T L A R S 3 1 0 1 0 0 1 1 0 0 1 0 0 0 2 1 1 0 1 1 0 0 14 0 1445.7151 H0YFZ4;A0A0A0MTP6;O15357 H0YFZ4 142 155 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 0.00047728 85.958 By MS/MS 1 1412600 0 1412600 1024 68 1063 2151 1681 1681 867 1 TLSSSTQASIEIDSLYEGIDFYTSITR TACERAKRTLSSSTQA DFYTSITRARFEELNA R T L T R A 1 1 0 2 0 1 2 1 0 4 2 0 0 1 0 6 4 0 2 0 0 0 27 0 2996.4502 E9PN89;E9PKE3;P11142;A8K7Q2;E9PNE6 E9PN89 213 239 HSPA8 Heat shock cognate 71 kDa protein yes no 3 0.00021862 52.824 By MS/MS 1 25087000 0 25087000 1025 265 1064 2152 1682 1682 1 TLTSLSNAELCFPR CLGSSAAKTLTSLSNA NAELCFPRQPTSTSPR K T L P R Q 1 1 1 0 1 0 1 0 0 0 3 0 0 1 1 2 2 0 0 0 0 0 14 0 1607.7977 H0YEM4 H0YEM4 699 712 VWA3B yes yes 2 0.010799 45.908 By MS/MS 1 0 0 0 1026 361 1065 2153 1683 1683 48 1 TLTYFNYDQSGDFQTVTFEGPEIR VILDNGGKTLTYFNYD TFEGPEIRKIFYGSFH K T L I R K 0 1 1 2 0 2 2 2 0 1 1 0 0 3 1 1 4 0 2 1 0 0 24 0 2827.2977 Q05707;A0A0A0MQT7 Q05707 1327 1350 COL14A1 Collagen alpha-1(XIV) chain yes no 2;3 4.6351E-38 111.44 By matching By MS/MS 1 2 24320000 3317000 21003000 1027 596 1066 2154;2155;2156 1684;1685;1686 1685 3 TLVLSNLSYSATEETLQEVFEK STWSGESKTLVLSNLS TLQEVFEKATFIKVPQ K T L E K A 1 0 1 0 0 1 4 0 0 0 4 1 0 1 0 3 3 0 1 2 0 0 22 0 2500.2585 P19338;H7BY16 P19338 487 508 NCL Nucleolin yes no 2;3 9.1695E-07 74.141 By matching By MS/MS 2 2 21929000 9582400 12347000 1028 532 1067 2157;2158;2159;2160 1687;1688 1688 2 TNTMNGSKSPVISRPK PTRKPWERTNTMNGSK SPVISRPKSTPLSQPS R T N P K S 0 1 2 0 0 0 0 1 0 1 0 2 1 0 2 3 2 0 0 1 0 0 16 2 1715.8989 A0A0U1RRM6 A0A0U1RRM6 732 747 yes yes 3 0.0018112 60.062 By MS/MS By MS/MS 2 2 2245700 1251800 993900 1029 103 1068 2161;2162;2163;2164 1689;1690 1690 13 69;70 2 TPAAAAAMNLASPR AVNLADSRTPAAAAAM AMNLASPRTAVAPSAV R T P P R T 6 1 1 0 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 0 0 14 0 1340.6871 Q9UQ35 Q9UQ35 2261 2274 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 2.6689E-22 136.7 By MS/MS By matching 1 1 1603800 831730 772100 1030 787 1069 2165;2166 1691 1691 102 650 1 TPQEIAVNLRPEQWPR ________________ LRPEQWPRVPDGGLTR M T P P R V 1 2 1 0 0 2 2 0 0 1 1 0 0 0 3 0 1 1 0 1 0 0 16 1 1933.017 F8WBG2 F8WBG2 2 17 ITGB5 yes yes 2 0.0060017 51.252 By matching By MS/MS 1 1 1278100 589920 688190 1031 313 1070 2167;2168 1692 1692 40 1 TPSPKEEDEEPESPPEKK ASKASKEKTPSPKEED PESPPEKKTSTSPPPE K T P K K T 0 0 0 1 0 0 6 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 18 2 2051.9535 Q9H1E3 Q9H1E3 202 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 1.314E-89 157.01 By MS/MS By MS/MS 1 2 16200000 6309600 9890300 1032 745 1071 2169;2170;2171 1693;1694;1695 1694 598 3 TPTSSPASSPLVAK KPLHGVLKTPTSSPAS ASSPLVAKKPLTTTPR K T P A K K 2 0 0 0 0 0 0 0 0 0 1 1 0 0 3 4 2 0 0 1 0 0 14 0 1341.714 Q14684 Q14684 728 741 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.0014844 83.877 By MS/MS By MS/MS 2 2 4998600 2463000 2535700 1033 620 1072 2172;2173;2174;2175 1696;1697 1697 480;481;482 2 TPVSGSLKSPVPR ENVKGGEKTPVSGSLK SLKSPVPRSDIPEPER K T P P R S 0 1 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 1 1323.751 H7C477;H0Y7U4;A0A0C4DG98;Q8NI27 H7C477 121 133 THOC2 THO complex subunit 2 yes no 2 0.0070702 68.262 By MS/MS 1 705460 0 705460 1034 75 1073 2176 1698 1698 53 1 TQDPSSPGTTPPQAR VEGTPASRTQDPSSPG GTTPPQARQAPAPTVI R T Q A R Q 1 1 0 1 0 2 0 1 0 0 0 0 0 0 4 2 3 0 0 0 0 0 15 0 1538.7325 Q13112 Q13112 424 438 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 0.0041445 68.944 By MS/MS By MS/MS 1 1 2936100 1449300 1486800 1035 608 1074 2177;2178 1699;1700 1700 470;471 2 TQHKSIYTREK ________________ KSIYTREKSYKCKKCG K T Q E K S 0 1 0 0 0 1 1 0 1 1 0 2 0 0 0 1 2 0 1 0 0 0 11 2 1389.7365 Q15940 Q15940 6 16 ZNF726P1 Putative zinc finger protein 726P1 yes yes 2 0.010399 45.137 By MS/MS By matching 1 1 1219400 610760 608650 1036 630 1075 2179;2180 1701 1701 217 487;936 1 TQMAEVLPSPR GGKAKGKKTQMAEVLP AEVLPSPRGQRVIPRI K T Q P R G 1 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 1 0 0 1 0 0 11 0 1227.6282 P11388 P11388 1205 1215 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.010279 70.68 By MS/MS By matching 1 1 886360 403370 482980 1037 519 1076 2181;2182 1702 1702 404 1 TQPDGTSVPGEPASPISQR NPLSKLPRTQPDGTSV PASPISQRLPPKVESL R T Q Q R L 1 1 0 1 0 2 1 2 0 1 0 0 0 0 4 3 2 0 0 1 0 0 19 0 1922.9334 H0YFY6;A0A087WY61;Q14980 H0YFY6 593 611 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 7.3669E-06 82.761 By MS/MS By MS/MS 2 2 9918300 4752300 5166000 1038 32 1077 2183;2184;2185;2186 1703;1704;1705 1704 15;16 2 TRHSPTPQQSNR PPATPPPKTRHSPTPQ PTPQQSNRTRKSRVSV K T R N R T 0 2 1 0 0 2 0 0 1 0 0 0 0 0 2 2 2 0 0 0 0 0 12 1 1407.6967 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 406 417 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.0032757 76.24 By MS/MS By matching 1 1 2622800 1217200 1405600 1039 133 1078 2187;2188 1706 1706 110 1 TSAVSSPLLDQQR SASKKDRKTSAVSSPL SPLLDQQRNSKTNQSK K T S Q R N 1 1 0 1 0 2 0 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 13 0 1400.726 Q5T200;A0A087WX14 Q5T200 237 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.00075129 98 By MS/MS By matching 1 1 1648700 878480 770200 1040 646 1079 2189;2190 1707 1707 503 1 TSDIFGSPVTATSR HLNPPGGKTSDIFGSP SPVTATSRLAHPNKPK K T S S R L 1 1 0 1 0 0 0 1 0 1 0 0 0 1 1 3 3 0 0 1 0 0 14 0 1437.71 H3BMT0;H3BTV5;H3BU16;A6NGP5;H3BMV3;Q9H910 H3BMT0 75 88 HN1L Hematological and neurological expressed 1-like protein yes no 2 0.014678 57.034 By matching By MS/MS 1 1 975170 476590 498580 1041 124 1080 2191;2192 1708 1708 94 1 TSDNSKNLLSVGR LCFPETAKTSDNSKNL KNLLSVGRTHPDFYTQ K T S G R T 0 1 2 1 0 0 0 1 0 0 2 1 0 0 0 3 1 0 0 1 0 0 13 1 1389.7212 H7C1I9;E7EWQ5;J3QT34;O15021 H7C1I9 1065 1077 MAST4 Microtubule-associated serine/threonine-protein kinase 4 yes no 2 0.0054716 58.676 By matching By MS/MS 1 1 666210 350640 315570 1042 243 1081 2193;2194 1709 1709 33 1 TSGSQARATCYCR GNGLSALRTSGSQARA ARATCYCRTGRCATRE R T S C R T 2 2 0 0 2 1 0 1 0 0 0 0 0 0 0 2 2 0 1 0 0 0 13 1 1516.6511 Q01523 Q01523 56 68 DEFA5 Defensin-5;HD5(23-94);HD5(29-94);HD5(56-94);HD5(63-94) yes yes 2 0.0093198 47.894 By MS/MS 1 0 0 0 1043 588 1082 2195 1710 1710 451;807;808;931 1 TSMGGTQQQFVEGVR AHQDTQRRTSMGGTQQ QQFVEGVRMEEIVEGC R T S V R M 0 1 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 15 0 1623.7675 B4DGU4;P35222 B4DGU4 544 558 CTNNB1 Catenin beta-1 yes no 2 0.00073352 66.262 By MS/MS By MS/MS 1 1 572310 228150 344170 1044 147 1083 2196;2197 1711;1712 1711 24 118;709 2 TSQVGAASAPAKESPR LQAKASGKTSQVGAAS APAKESPRKGAAPAPP K T S P R K 4 1 0 0 0 1 1 1 0 0 0 1 0 0 2 3 1 0 0 1 0 0 16 1 1555.7954 J3KQ96;E7ETY2;Q13428 J3KQ96 368 383 TCOF1 Treacle protein yes no 2;3 0.00020357 89.846 By MS/MS By MS/MS 2 2 19915000 12433000 7482600 1045 238 1084 2198;2199;2200;2201 1713;1714;1715 1713 177 3 TSSGDASSLSIEETNKLR YEAAASSKTSSGDASS IEETNKLRAKLGLKPL K T S L R A 1 1 1 1 0 0 2 1 0 1 2 1 0 0 0 5 2 0 0 0 0 0 18 1 1893.928 E9PQI8;O43290 E9PQI8 110 127 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 2 0.01008 47.288 By MS/MS 1 0 0 0 1046 275 1085 2202 1716 1716 215;216;217;736 1 TSSVVTLEVAK RAAELMTRTSSVVTLE VVTLEVAKQGAIYHGL R T S A K Q 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 2 2 0 0 3 0 0 11 0 1132.634 Q5TIG5;A8MQ02;J3KN01;P55196 Q5TIG5 1081 1091 MLLT4 Afadin yes no 2 0.0056263 82.85 By MS/MS By MS/MS 1 1 1724700 774730 949960 1047 128 1086 2203;2204 1717;1718 1718 98 2 TTSISPALAR IPPKVPQRTTSISPAL SISPALARKNSPGNGS R T T A R K 2 1 0 0 0 0 0 0 0 1 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1015.5662 Q9UKE5 Q9UKE5 676 685 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.012104 76.927 By MS/MS By matching 1 1 2078600 909580 1169000 1048 780 1087 2205;2206 1719 1719 637 1 TVAGGAWTYNTTSAVTVK WHCGSCMKTVAGGAWT TTSAVTVKSAIRRLKE K T V V K S 3 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 5 1 1 3 0 0 18 0 1825.921 C9J4Z3;P61513 C9J4Z3 39 56 RPL37A 60S ribosomal protein L37a yes no 2 0.0080486 57.106 By MS/MS By matching 1 1 1263200 786730 476440 1049 179 1088 2207;2208 1720 1720 1 TVANLLSGKSPR MPHPATGKTVANLLSG LLSGKSPRKSAEPSAN K T V P R K 1 1 1 0 0 0 0 1 0 0 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1241.7092 J3KQ96;E7ETY2;Q13428 J3KQ96 147 158 TCOF1 Treacle protein yes no 3 0.00163 87.99 By MS/MS By MS/MS 1 1 2619600 1177900 1441700 1050 238 1089 2209;2210 1721;1722;1723 1722 183;184 3 TVDLDPGTLYVHSV PSRKSRAKTVDLDPGT GTLYVHSV________ K T V S V - 0 0 0 2 0 0 0 1 1 0 2 0 0 0 1 1 2 0 1 3 0 0 14 0 1514.7617 Q8WY07 Q8WY07 606 619 SLC7A3 Cationic amino acid transporter 3 yes yes 2 0.010493 60.518 By MS/MS By matching 1 1 1898600 813700 1084900 1051 707 1090 2211;2212 1724 1724 560 1 TVDLGISDLEDDC TTGKRTIKTVDLGISD ISDLEDDC________ K T V D C - 0 0 0 4 1 0 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 13 0 1450.6134 F5H5U2;Q8NHQ9 F5H5U2 557 569 DDX55 ATP-dependent RNA helicase DDX55 yes no 2 0.006679 67.252 By MS/MS 1 1377900 0 1377900 1052 293 1091 2213 1725 1725 234 1 TVIFSADTSDYNGIILK ECHKNGTRTVIFSADT DYNGIILKVSAL____ R T V L K V 1 0 1 2 0 0 0 1 0 3 1 1 0 1 0 2 2 0 1 1 0 0 17 0 1855.9567 H3BP68 H3BP68 31 47 CMC2 yes yes 2 1.3169E-08 43.024 By MS/MS 1 205750 0 205750 1053 376 1092 2214 1726 1726 293;765;766 0 TVIIEQSWGSPK VTMGPKGRTVIIEQSW EQSWGSPKVTKDGVTV R T V P K V 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 2 1 1 0 1 0 0 12 0 1343.7085 P10809;C9JL19;C9JCQ4;C9JL25;E7EXB4;E7ESH4 P10809 61 72 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2 1.949E-05 103.7 By matching By MS/MS 1 1 466060 221660 244410 1054 516 1093 2215;2216 1727 1727 1 TVSASSTGDLPK SPSHDRSRTVSASSTG SSTGDLPKAKTRAADL R T V P K A 1 0 0 1 0 0 0 1 0 0 1 1 0 0 1 3 2 0 0 1 0 0 12 0 1161.5877 H7C5L6;P78362 H7C5L6 99 110 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 2 0.0093513 61.423 By matching By MS/MS 1 1 893450 395790 497670 1055 397 1094 2217;2218 1728 1728 311;771 1 TVTAMDVVYALK YTEHAKRKTVTAMDVV MDVVYALKRQGRTLYG K T V L K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 1 3 0 0 12 0 1309.6952 P62805 P62805 81 92 HIST1H4A Histone H4 yes yes 2 0.0057683 74.165 By MS/MS By matching 1 1 1571800 832300 739530 1056 580 1095 2219;2220 1729 1729 1 TVTIWEIINSEYFTAEQR PFGKFQGKTVTIWEII EYFTAEQRRDLLRQFR K T V Q R R 1 1 1 0 0 1 3 0 0 3 0 0 0 1 0 1 3 1 1 1 0 0 18 0 2199.0848 Q15149 Q15149 3058 3075 PLEC Plectin yes yes 2 3.2465E-89 153.81 By MS/MS By MS/MS 1 1 10815000 5534200 5281200 1057 624 1096 2221;2222 1730;1731 1731 2 TYWIIIELK ITCSERVRTYWIIIEL YWIIIELKHKAREKPY R T Y L K H 0 0 0 0 0 0 1 0 0 3 1 1 0 0 0 0 1 1 1 0 0 0 9 0 1177.6747 B5MCA4;P16422 B5MCA4 169 177 EPCAM Epithelial cell adhesion molecule yes no 2 0.01008 101.72 By MS/MS By matching 1 1 3235300 1607600 1627700 1058 155 1097 2223;2224 1732 1732 1 VADAKGDSESEEDEDLEVPVPSR PPEPGPDRVADAKGDS LEVPVPSRFNRRVSVC R V A S R F 2 1 0 4 0 0 5 1 0 0 1 1 0 0 2 3 0 0 0 3 0 0 23 1 2472.114 P13861 P13861 71 93 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 3 0.0024759 51.31 By matching By MS/MS 1 1 2955500 1657900 1297600 1059 522 1098 2225;2226 1733 1733 406;407 1 VADLTEQYNEQYGAVR CPIDRSGRVADLTEQY NEQYGAVRTPYTMSYG R V A V R T 2 1 1 1 0 2 2 1 0 0 1 0 0 0 0 0 1 0 2 2 0 0 16 0 1854.8748 Q9BWF3 Q9BWF3 183 198 RBM4 RNA-binding protein 4 yes yes 2 0.0074916 45.915 By matching By MS/MS 1 1 821900 321200 500700 1060 738 1099 2227;2228 1734 1734 947 1 VADPDHDHTGFLTEYVATR ICDFGLARVADPDHDH LTEYVATRWYRAPEIM R V A T R W 2 1 0 3 0 0 1 1 2 0 1 0 0 1 1 0 3 0 1 2 0 0 19 0 2142.997 P28482 P28482 173 191 MAPK1 Mitogen-activated protein kinase 1 yes yes 3 1.324E-06 84.653 By matching By MS/MS 1 1 19042000 9896800 9145300 1061 544 1100 2229;2230 1735 1735 925 1 VAEGTQVLELPFKGDDITMVLILPKPEK EGKFRYRRVAEGTQVL LILPKPEKSLAKVEKE R V A E K S 1 0 0 2 0 1 3 2 0 2 4 3 1 1 3 0 2 0 0 3 0 0 28 2 3079.6879 P01008 P01008 295 322 SERPINC1 Antithrombin-III yes yes 4 0.011136 30.117 By MS/MS 1 1919000 0 1919000 1062 478 1101 2231 1736 1736 1 VALSDDETKETENMR KEKKRGKRVALSDDET TKETENMRKKRRRIKL R V A M R K 1 1 1 2 0 0 3 0 0 0 1 1 1 0 0 1 2 0 0 1 0 0 15 1 1736.7887 H0YD46;Q15054 H0YD46 28 42 POLD3 DNA polymerase delta subunit 3 yes no 3 0.0045755 58.268 By MS/MS By matching 1 1 3096700 1166100 1930600 1063 356 1102 2232;2233 1737 1737 283 1 VALTGLTVAEYFR EPPGARARVALTGLTV LTVAEYFRDQEGQDVL R V A F R D 2 1 0 0 0 0 1 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1438.782 P06576;F8W0P7;H0YH81 P06576 282 294 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 2.7108E-09 117.52 By MS/MS By MS/MS 1 1 3619200 1511300 2107900 1064 496 1103 2234;2235 1738;1739 1738 2 VAVFFSNTPTR RNGFLMRKVAVFFSNT FFSNTPTRASPQLREA K V A T R A 1 1 1 0 0 0 0 0 0 0 0 0 0 2 1 1 2 0 0 2 0 0 11 0 1237.6455 E7ENL6;P12111 E7ENL6 1903 1913 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.011229 62.823 By matching By MS/MS 1 1 658370 338500 319860 1065 227 1104 2236;2237 1740 1740 1 VAVVTYNNEVTTEIR SNCPRGARVAVVTYNN NEVTTEIRFADSKRKS R V A I R F 1 1 2 0 0 0 2 0 0 1 0 0 0 0 0 0 3 0 1 4 0 0 15 0 1706.8839 E7ENL6;P12111 E7ENL6 1837 1851 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0027415 62.89 By MS/MS By matching 1 1 706620 328580 378040 1066 227 1105 2238;2239 1741 1741 1 VAYDLVYYVR IETDFGLRVAYDLVYY YDLVYYVRVTVPGNYY R V A V R V 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 3 3 0 0 10 0 1259.655 A0A087WUZ2;A0A087WXI2;Q9Y6R7 A0A087WUZ2 231 240 FCGBP IgGFc-binding protein yes no 2 0.011463 66.621 By MS/MS By matching 1 1 1703000 770560 932430 1067 21 1106 2240;2241 1742 1742 1 VDFLQLMIDSQNSK LEDTQKHRVDFLQLMI MIDSQNSKETESHKAL R V D S K E 0 0 1 2 0 2 0 0 0 1 2 1 1 1 0 2 0 0 0 1 0 0 14 0 1636.8131 E7EVM8;A0A087WV96;P24462;P08684 E7EVM8 119 132 CYP3A4;CYP3A7 Cytochrome P450 3A7;Cytochrome P450 3A4 yes no 2 0.013216 46.844 By MS/MS 1 2085800 2085800 0 1068 24 1107 2242 1743 1743 5;120;121 3 1 VDKDLQSLEDILHQVENK FLSTYQTKVDKDLQSL ILHQVENKTSEVKQLI K V D N K T 0 0 1 3 0 2 2 0 1 1 3 2 0 0 0 1 0 0 0 2 0 0 18 1 2122.0906 C9JEU5;C9JC84;P02679 C9JEU5 62 79 FGG Fibrinogen gamma chain yes no 3 0.0051236 47.916 By MS/MS 1 803560 0 803560 1069 182 1108 2243 1744 1744 21 1 VDYVVVDQQK GSSVADERVDYVVVDQ YVVVDQQKTLALKSTR R V D Q K T 0 0 0 2 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 4 0 0 10 0 1191.6136 B7Z3B9;Q13480 B7Z3B9 554 563 GAB1 GRB2-associated-binding protein 1 yes no 2 0.0030911 79.489 By MS/MS 1 240140 0 240140 1070 161 1109 2244 1745 1745 878 1 VEGDNIYVR LEEKNSLRVEGDNIYV EGDNIYVRHSNLMLEE R V E V R H 0 1 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 2 0 0 9 0 1063.5298 E9PMV8;H0Y5B0;O43491;E9PPC9;Q6ZSX4 E9PMV8 16 24 EPB41L2 Band 4.1-like protein 2 yes no 2 0.00025823 126.52 By MS/MS By MS/MS 1 1 10271000 4153300 6117600 1071 272 1110 2245;2246 1746;1747 1747 890 2 VEILANDQGNR VGVFQQGRVEILANDQ LANDQGNRTTPSYVAF R V E N R T 1 1 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1227.6208 P48741;P17066 P48741 28 38 HSPA7;HSPA6 Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 6 yes no 2 0.013955 61.65 By MS/MS By matching 1 1 1948300 835260 1113000 1072 526 1111 2247;2248 1748 1748 1 VEKIGEGTYGVVYK ________________ GTYGVVYKARNKLTGE K V E Y K A 0 0 0 0 0 0 2 3 0 1 0 2 0 0 0 0 1 0 2 3 0 0 14 1 1540.8137 G3V317;K7ELV5;E7ESI2;G3V5T9;P24941;Q00526 G3V317 7 20 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 2;3 0.0092779 55.806 By MS/MS By MS/MS 1 1 559330 405340 153980 1073 234 1112 2249;2250 1749;1750 1750 727;886 2 VELQELNDR KNTRTNEKVELQELND ELQELNDRFANYIDKV K V E D R F 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1114.5619 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;P17661 P08670 105 113 VIM;DES Vimentin;Desmin yes no 2 0.011252 82.279 By matching By MS/MS 1 1 762230 383400 378830 1074 507 1113 2251;2252 1751 1751 1 VEQLRVLGLSDDPELDDK V E D K 0 1 0 4 0 1 2 1 0 0 4 1 0 0 1 1 0 0 0 2 0 0 18 1 2040.0375 REV__Q96NL3 yes yes 2 0.014939 44.511 By MS/MS 1 2037400 2037400 0 + 1075 809 1114 2253 1752 1752 668 0 VETGVLKPGMVVTFAPVNVTTEVK IGTVPVGRVETGVLKP VNVTTEVKSVEMHHEA R V E V K S 1 0 1 0 0 0 2 2 0 0 1 2 1 1 2 0 4 0 0 7 0 0 24 1 2514.3767 Q5VTE0;P68104;A0A087WVQ9 Q5VTE0 267 290 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 3 0.014748 40.723 By MS/MS By matching 1 1 929420 321130 608290 1076 583 1115 2254;2255 1753 1753 74 1 VFAAEAVTADSEVLEERQK RALCLFPRVFAAEAVT EVLEERQKRLPYVPEP R V F Q K R 4 1 0 1 0 1 4 0 0 0 1 1 0 1 0 1 1 0 0 3 0 0 19 1 2091.0484 F8WAU6;F8WB00;F8WC42;C9JR82;C9JU35;G3XA94;Q9NPL8 F8WAU6 22 40 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes no 2 0.014312 42.083 By MS/MS 1 0 0 0 1077 187 1116 2256 1754 1754 155 717 1 VFAVVITDGR ESRRQKTRVFAVVITD AVVITDGRHDPRDDDL R V F G R H 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 3 0 0 10 0 1075.6026 P12110 P12110 725 734 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.0049306 96.668 By MS/MS By MS/MS 1 1 7556000 3549500 4006500 1078 520 1117 2257;2258 1755;1756 1756 2 VFDEFKPLVEEPQNLIK DPHECYAKVFDEFKPL EEPQNLIKQNCELFEQ K V F I K Q 0 0 1 1 0 1 3 0 0 1 2 2 0 2 2 0 0 0 0 2 0 0 17 1 2044.0881 A0A0C4DGB6;CON__P02768-1;P02768;H0YA55;D6RHD5;B7WNR0;C9JKR2;A0A087WWT3 A0A0C4DGB6 397 413 ALB Serum albumin yes no 3 0.00059323 64.52 By MS/MS By MS/MS 2 2 4055700 2003800 2051900 + 1079 77 1118 2259;2260;2261;2262 1757;1758 1757 2 VGAGAPVYLAAVLEYLTAEILELAGNAAR RKGNYSERVGAGAPVY ELAGNAARDNKKTRII R V G A R D 8 1 1 0 0 0 3 3 0 1 5 0 0 0 1 0 1 0 2 3 0 0 29 0 2914.5804 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q93077;Q8IUE6;Q7L7L0;P20671;P0C0S8;P04908;P16104;H0YFX9 A0A0U1RR32 44 72 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST1H2AC;HIST2H2AB;HIST3H2A;HIST1H2AD;HIST1H2AG;HIST1H2AB;H2AFX Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 1-C;Histone H2A type 2-B;Histone H2A type 3;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2AX;Histone H2A yes no 2 7.1984E-25 94.203 By MS/MS By matching 1 1 1961300 840020 1121300 1080 100 1119 2263;2264 1759 1759 1 VGDTEKPEPERSPPNR EPKARPLRVGDTEKPE PERSPPNRKRPANEKA R V G N R K 0 2 1 1 0 0 3 1 0 0 0 1 0 0 4 1 1 0 0 1 0 0 16 2 1806.886 Q9NZ63 Q9NZ63 250 265 C9orf78 Uncharacterized protein C9orf78 yes yes 3 0.0027807 71.031 By matching By MS/MS 1 1 3880100 2132200 1747900 1081 770 1120 2265;2266 1760 1760 629 1 VGGLKTRCSSCNVK SAIEGKGKVGGLKTRC RCSSCNVKFESESELQ K V G V K F 0 1 1 0 2 0 0 2 0 0 1 2 0 0 0 2 1 0 0 2 0 0 14 2 1564.7814 J3QQI2;J3KTI4;H7BYU6;Q96K83 J3QQI2 91 104 ZNF521 Zinc finger protein 521 yes no 2 0.008391 45.347 By MS/MS 1 422430 422430 0 1082 390 1121 2267 1761 1761 305;306;768 1 VGGSDEEASGIPSR LEGMKKARVGGSDEEA EASGIPSRTASLELDL R V G S R T 1 1 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 14 0 1359.6266 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 H7C446 116 129 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2 8.3588E-10 118.19 By MS/MS By MS/MS 1 1 13178000 6416600 6760900 1083 71 1122 2268;2269 1762;1763 1763 51 2 VGKVGPMIGQYVDSQWSLA NRRSALARVGKVGPMI VDSQWSLA________ R V G L A - 1 0 0 1 0 2 0 3 0 1 1 1 1 0 1 2 0 1 1 3 0 0 19 1 2034.0244 A0A0U1RRJ9 A0A0U1RRJ9 178 196 yes yes 2 7.0343E-17 41.052 By MS/MS 1 4163200 4163200 0 1084 102 1123 2270 1764 1764 869 0 VGPVSAVGLT YGFHGGQRVGPVSAVG PVSAVGLT________ R V G L T - 1 0 0 0 0 0 0 2 0 0 1 0 0 0 1 1 1 0 0 3 0 0 10 0 898.51238 A0A140T956 A0A140T956 2271 2280 yes yes 2 0.0052501 87.308 By matching By MS/MS 1 1 4455000 2609000 1846100 1085 105 1124 2271;2272 1765 1765 696 1 VGSLDNVGHLPAGGAVK FKEKAQAKVGSLDNVG LPAGGAVKIETYRLTF K V G V K I 2 0 1 1 0 0 0 4 1 0 2 1 0 0 1 1 0 0 0 3 0 0 17 0 1589.8526 H0Y2V1;H7C4C5;F8W9U4;E7EVA0;P27816 H0Y2V1 399 415 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 0.0030278 68.44 By MS/MS By MS/MS 2 2 7669400 3248000 4421400 1086 242 1125 2273;2274;2275;2276 1766;1767;1768 1767 189 3 VGVVQYSHEGTFEAIQLDDER PKSETGTRVGVVQYSH AIQLDDERIDSLSSFK R V G E R I 1 1 0 2 0 2 3 2 1 1 1 0 0 1 0 1 1 0 1 3 0 0 21 0 2391.1343 P12110;H7C0M5 P12110 660 680 COL6A2 Collagen alpha-2(VI) chain yes no 3 0.00040201 65.25 By MS/MS By MS/MS 1 1 2715300 923150 1792100 1087 520 1126 2277;2278 1769;1770 1770 2 VIEVSHWGNIAVEENVDLK LTITSMTRVIEVSHWG VEENVDLKHTGAVLKG R V I L K H 1 0 2 1 0 0 3 1 1 2 1 1 0 0 0 1 0 1 0 4 0 0 19 0 2150.1008 B7Z4L4;P04843 B7Z4L4 61 79 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 3 0.0043155 52.731 By MS/MS By matching 1 1 599940 341790 258150 1088 162 1127 2279;2280 1771 1771 1 VIHLQFNNIASITDDTFCK LNLPESLRVIHLQFNN ITDDTFCKANDTSYIR R V I C K A 1 0 2 2 1 1 0 0 1 3 1 1 0 2 0 1 2 0 0 1 0 0 19 0 2235.0994 P20774 P20774 238 256 OGN Mimecan yes yes 3 3.9108E-05 74.793 By matching By MS/MS 1 1 2488600 1031200 1457500 1089 536 1128 2281;2282 1772 1772 78 1 VIKDEALSDGDDLR TVKSENLKVIKDEALS LSDGDDLRDFPSDLKK K V I L R D 1 1 0 4 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 1 0 0 14 1 1544.7682 E7EUB5;Q01831 E7EUB5 81 94 XPC DNA repair protein complementing XP-C cells yes no 2 0.014089 59.68 By MS/MS By matching 1 1 1061600 343740 717810 1090 239 1129 2283;2284 1773 1773 185 1 VIQYLAYVASSHK GKTENTKKVIQYLAYV AYVASSHKSKKDQGEL K V I H K S 2 0 0 0 0 1 0 0 1 1 1 1 0 0 0 2 0 0 2 2 0 0 13 0 1477.7929 P35579;Q5BKV1 P35579 187 199 MYH9 Myosin-9 yes no 3 0.0018521 63.181 By MS/MS By MS/MS 1 1 844490 203240 641250 1091 551 1130 2285;2286 1774;1775 1774 2 VLDTSSLTQSAPASPTNK TVNARPQRVLDTSSLT APASPTNKGVHIHQAG R V L N K G 2 0 1 1 0 1 0 0 0 0 2 1 0 0 2 4 3 0 0 1 0 0 18 0 1815.9214 I3L436;Q8N122 I3L436 10 27 RPTOR Regulatory-associated protein of mTOR yes no 2 0.0058035 61.102 By matching By MS/MS 1 1 3678200 1466900 2211400 1092 404 1131 2287;2288 1776 1776 314;773 1 VLEDDPEAAYTTR VSDFGLSRVLEDDPEA PEAAYTTRGGKIPIRW R V L T R G 2 1 0 2 0 0 2 0 0 0 1 0 0 0 1 0 2 0 1 1 0 0 13 0 1478.6889 F8W9W0;C9JXA2;E9PG71;F8VP57;B7ZKW7;B7ZKJ3;P29320;P54764;P54756 F8W9W0 661 673 EPHA5;EPHA3;EPHA4 Receptor protein-tyrosine kinase;Ephrin type-A receptor 3;Ephrin type-A receptor 4;Ephrin type-A receptor 5 yes no 2 0.0010116 79.659 By matching By MS/MS 1 1 3535400 1823600 1711700 1093 164 1132 2289;2290 1777 1777 879 1 VLFQDNSSHLPAASYR IRPIYLTRVLFQDNSS HLPAASYRKKDSGVQE R V L Y R K 2 1 1 1 0 1 0 0 1 0 2 0 0 1 1 3 0 0 1 1 0 0 16 0 1803.8904 P00451 P00451 1426 1441 F8 Coagulation factor VIII;Factor VIIIa heavy chain, 200 kDa isoform;Factor VIIIa heavy chain, 92 kDa isoform;Factor VIII B chain;Factor VIIIa light chain yes yes 3 0.0067204 48.112 By matching By MS/MS 1 1 630250 294810 335440 1094 475 1133 2291;2292 1778 1778 68 1 VLGAFSDGLAHLDNLK KVKAHGKKVLGAFSDG LAHLDNLKGTFATLS_ K V L L K G 2 0 1 2 0 0 0 2 1 0 4 1 0 1 0 1 0 0 0 1 0 0 16 0 1668.8835 F8W6P5;E9PEW8;E9PFT6;P68871;P02042 F8W6P5 68 83 HBB;HBD Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta yes no 3 0.0073582 42.958 By MS/MS By MS/MS 1 1 671750 308900 362850 1095 249 1134 2293;2294 1779;1780 1779 2 VLNEECDQNWYK FKRGDILKVLNEECDQ ECDQNWYKAELNGKDG K V L Y K A 0 0 2 1 1 1 2 0 0 0 1 1 0 0 0 0 0 1 1 1 0 0 12 0 1596.6879 P62993;J3KT38;J3QRL5 P62993 27 38 GRB2 Growth factor receptor-bound protein 2 yes no 2 0.0029834 90.906 By MS/MS 1 321310 321310 0 1096 582 1135 2295 1781 1781 1 VLQATVVAVGSGSK LPEKSQGKVLQATVVA VAVGSGSKGKGGEIQP K V L S K G 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 2 1 0 0 4 0 0 14 0 1314.7507 B8ZZL8;S4R3N1;P61604 B8ZZL8 41 54 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial yes no 2 0.0028401 65.842 By MS/MS 1 278190 0 278190 1097 167 1136 2296 1782 1782 1 VLSTAVVGAPLLLGAR SPTPLWRKVLSTAVVG APLLLGARYVMAEARE K V L A R Y 3 1 0 0 0 0 0 2 0 0 4 0 0 0 1 1 1 0 0 3 0 0 16 0 1535.9399 E9PLF3;E9PJ20;Q3MIX3 E9PLF3 50 65 ADCK5 Uncharacterized aarF domain-containing protein kinase 5 yes no 1 0.005393 15.202 By matching By MS/MS 1 1 893400 265480 627920 1098 259 1137 2297;2298 1783 1783 0 VLTEIYNTGYR V L Y R 0 1 1 0 0 0 1 1 0 1 1 0 0 0 0 0 2 0 2 1 0 0 11 0 1327.6772 REV__Q9Y6A4 yes yes 2 0.013057 60.436 By matching By MS/MS 1 2 1390900 411870 979040 + 1099 811 1138 2299;2300;2301 1784 1784 1 VLVVGDAAVGK GSRDHLFKVLVVGDAA VGDAAVGKTSLVQRYS K V L G K T 2 0 0 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 4 0 0 11 0 1026.6073 E9PL56;O14966 E9PL56 10 20 RAB29 Ras-related protein Rab-7L1 yes no 1 0.013303 38.086 By MS/MS 1 614430 614430 0 1100 268 1139 2302 1785 1785 1 VMEGTVAAQDEFYR CTRLIKPKVMEGTVAA AAQDEFYRSGWALNMK K V M Y R S 2 1 0 1 0 1 2 1 0 0 0 0 1 1 0 0 1 0 1 2 0 0 14 0 1614.7348 P41240 P41240 172 185 CSK Tyrosine-protein kinase CSK yes yes 2 0.0016674 60.434 By MS/MS By MS/MS 1 1 1055300 502610 552660 1101 555 1140 2303;2304 1786;1787 1786 68 926 2 VNDAEPGSPEAPQGK RRPRRRRRVNDAEPGS SPEAPQGKRRKADGED R V N G K R 2 0 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 15 0 1494.6951 Q8N8A6 Q8N8A6 76 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 2 0.0032412 66.387 By MS/MS By matching 1 1 1460300 737530 722780 1102 694 1141 2305;2306 1788 1788 546 1 VNFSEEGETEEDDQDSSHSSVTTVK EATSVQQKVNFSEEGE HSSVTTVKARSRDSDE K V N V K A 0 0 1 3 0 1 5 1 1 0 0 1 0 1 0 5 3 0 0 3 0 0 25 0 2755.158 A0A0A0MSK5;J3KN66;Q5JTV8;H0YD16 A0A0A0MSK5 91 115 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 7.4574E-05 62.735 By MS/MS 1 1588100 0 1588100 1103 61 1142 2307 1789 1789 43 1 VNLEESSGVENSPAGARPK VLDFHLNRVNLEESSG SPAGARPKRKNKKSYD R V N P K R 2 1 2 0 0 0 3 2 0 0 1 1 0 0 2 3 0 0 0 2 0 0 19 1 1939.9599 Q8WVM8 Q8WVM8 292 310 SCFD1 Sec1 family domain-containing protein 1 yes yes 3 0.00011267 73.796 By MS/MS By MS/MS 1 1 2044300 985530 1058800 1104 704 1143 2308;2309 1790;1791 1791 558 2 VNSGDTEVGSSLLR VKAIPRRRVNSGDTEV EVGSSLLRHPSPELSR R V N L R H 0 1 1 1 0 0 1 2 0 0 2 0 0 0 0 3 1 0 0 2 0 0 14 0 1432.7158 O75592 O75592 3465 3478 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 0.011596 59.884 By MS/MS By matching 1 1 817480 355930 461550 1105 459 1144 2310;2311 1792 1792 370 1 VPQLEIVPNSAEER LLRLKKYKVPQLEIVP VPNSAEERLHSMKEGI K V P E R L 1 1 1 0 0 1 3 0 0 1 1 0 0 0 2 1 0 0 0 2 0 0 14 0 1579.8206 CON__P02662 CON__P02662 106 119 yes yes 2 0.0047254 68.413 By matching By MS/MS 1 1 1429000 617980 811040 + 1106 199 1145 2312;2313 1793 1793 149 1 VPQSVTNSVPK CVELINQKVPQSVTNS SVTNSVPKPVSKKHGK K V P P K P 0 0 1 0 0 1 0 0 0 0 0 1 0 0 2 2 1 0 0 3 0 0 11 0 1154.6295 G3V174;A7KAX9 G3V174 249 259 ARHGAP32 Rho GTPase-activating protein 32 yes no 2 0.014643 65.395 By MS/MS 1 605930 0 605930 1107 127 1146 2314 1794 1794 701 1 VPVDPATYGQFYGGDSYIILYNYR WRIEGSNKVPVDPATY YIILYNYRHGGRQGQI K V P Y R H 1 1 1 2 0 1 0 3 0 2 1 0 0 1 2 1 1 0 5 2 0 0 24 0 2770.3279 A0A0A0MS51;A0A0A0MT01;CON__Q3SX14;P06396 A0A0A0MS51 424 447 GSN Gelsolin yes no 3 5.0382E-19 86.357 By MS/MS 1 8561500 0 8561500 + 1108 60 1147 2315 1795 1795 1 VQAYEEPSVASSPNGKESDLR LTQDWESRVQAYEEPS NGKESDLRRSEVPCAP R V Q L R R 2 1 1 1 0 1 3 1 0 0 1 1 0 0 2 4 0 0 1 2 0 0 21 1 2262.0764 Q99575 Q99575 719 739 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 3 0.00027425 69.133 By MS/MS By MS/MS 2 2 3459600 1668100 1791600 1109 730 1148 2316;2317;2318;2319 1796;1797 1797 106 582 2 VQEKPDSPGGSTQIQR SKPCGSPRVQEKPDSP GGSTQIQRYLDAERLA R V Q Q R Y 0 1 0 1 0 3 1 2 0 1 0 1 0 0 2 2 1 0 0 1 0 0 16 1 1725.8646 M0R300;M0R0P8;Q13459 M0R300 1284 1299 MYO9B Unconventional myosin-IXb yes no 3 0.0021705 61.139 By MS/MS By matching 1 1 1121200 632000 489240 1110 431 1149 2320;2321 1798 1798 338 1 VRLQTQTTYRGIVDCMVK GHPFDTVKVRLQTQTT GIVDCMVKIYRHESLL K V R V K I 0 2 0 1 1 2 0 1 0 1 1 1 1 0 0 0 3 0 1 3 0 0 18 2 2167.1242 E9PK53;E9PJQ3;Q8N413 E9PK53 28 45 SLC25A45 Solute carrier family 25 member 45 yes no 3 0.0051428 43.798 By matching By MS/MS 1 1 1394600 730800 663820 1111 262 1150 2322;2323 1799 1799 168;169 32 1 VSDQNSPVLPK AYMLFYQRVSDQNSPV QNSPVLPKKSRVSVVR R V S P K K 0 0 1 1 0 1 0 0 0 0 1 1 0 0 2 2 0 0 0 2 0 0 11 0 1182.6245 Q9UPU5 Q9UPU5 2042 2052 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.0030576 98.407 By MS/MS By MS/MS 1 1 6786400 3021500 3764900 1112 785 1151 2324;2325 1800;1801 1801 643 2 VSGAGFSPSSK FGIIGNDRVSGAGFSP AGFSPSSKMEGGHFVP R V S S K M 1 0 0 0 0 0 0 2 0 0 0 1 0 1 1 4 0 0 0 1 0 0 11 0 1022.5033 Q9C0C2 Q9C0C2 1132 1142 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0069303 69.812 By MS/MS By matching 1 1 1190700 467220 723510 1113 743 1152 2326;2327 1802 1802 1 VSGFFLFGSPLGLVLALRK STARLDFKVSGFFLFG GLVLALRKTVMPALEA K V S R K T 1 1 0 0 0 0 0 3 0 0 5 1 0 3 1 2 0 0 0 2 0 0 19 1 2020.1874 O00562 O00562 690 708 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 yes yes 3 0.014939 15.422 By MS/MS 1 159430 159430 0 1114 438 1153 2328 1803 1803 0 VSLEPHQGPGTPESK TTRQQRKRVSLEPHQG GPGTPESKKATSCFPR R V S S K K 0 0 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 15 0 1561.7736 H0YFY6;A0A087WY61;Q14980 H0YFY6 839 853 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 0.0099761 59.15 By MS/MS By matching 2 2 4226200 2083600 2142600 1115 32 1154 2329;2330;2331;2332 1804;1805 1804 677 2 VTEYLVVYTPTHEGGLEMQFR LAWDNEMRVTEYLVVY GGLEMQFRVPGDQTST R V T F R V 0 1 0 0 0 1 3 2 1 0 2 0 1 1 1 0 3 0 2 3 0 0 21 0 2468.2046 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 649 669 TNC Tenascin yes no 3 0.0085978 40.349 By MS/MS 1 412210 412210 0 1116 246 1155 2333 1806 1806 31 1 VTFNGLNQMIVIELGTNPLK NEITKVRKVTFNGLNQ ELGTNPLKSSGIENGA K V T L K S 0 0 3 0 0 1 1 2 0 2 3 1 1 1 1 0 2 0 0 2 0 0 20 0 2200.1926 P07585 P07585 168 187 DCN Decorin yes yes 2;3 3.3627E-08 86.467 By MS/MS 2 8133000 0 8133000 1117 500 1156 2334;2335 1807;1808;1809 1808 75;205 58 3 VTGEEWLVTTVGAYLPAVFEEVLDLVDAVILTEK WDRDGKERVTGEEWLV DAVILTEKTALHLRAR R V T E K T 3 0 0 2 0 0 5 2 0 1 5 1 0 1 1 0 4 1 1 7 0 0 34 0 3717.9645 Q14764 Q14764 191 224 MVP Major vault protein yes yes 3;4 6.3066E-83 131.83 By MS/MS By MS/MS 2 2 20194000 9769800 10424000 1118 621 1157 2336;2337;2338;2339 1810;1811;1812 1812 3 VTMNFEPNKVNIQKK SRDVAVVKVTMNFEPN NKVNIQKKNCHMEGKE K V T K K N 0 0 3 0 0 1 1 0 0 1 0 3 1 1 1 0 1 0 0 2 0 0 15 2 1788.9556 P56199 P56199 672 686 ITGA1 Integrin alpha-1 yes yes 3 0.012326 42.209 By MS/MS 1 0 0 0 1119 575 1158 2340 1813 1813 86 72 806 1 VTQAQSSVSMPVR SGSSVAQKVTQAQSSV SSVSMPVRKAVTLNCL K V T V R K 1 1 0 0 0 2 0 0 0 0 0 0 1 0 1 3 1 0 0 3 0 0 13 0 1388.7082 A0A1B0GX56 A0A1B0GX56 24 36 yes yes 2 0.0064985 51.436 By MS/MS 1 366540 366540 0 1120 115 1159 2341 1814 1814 22 698 1 VTQHESDNENEIQIQNK DSLEVERRVTQHESDN NEIQIQNKLKKDFPKQ R V T N K L 0 0 3 1 0 3 3 0 1 2 0 1 0 0 0 1 1 0 0 1 0 0 17 0 2024.9399 Q5VZL5 Q5VZL5 117 133 ZMYM4 Zinc finger MYM-type protein 4 yes yes 3 2.5807E-20 111.57 By MS/MS By MS/MS 1 1 4161600 1743200 2418400 1121 652 1160 2342;2343 1815;1816 1815 508;825 2 VTSGGVSESPSGFSK KKGAKRPRVTSGGVSE ESPSGFSKHIQSNLDF R V T S K H 0 0 0 0 0 0 1 3 0 0 0 1 0 1 1 5 1 0 0 2 0 0 15 0 1424.6783 J3KN87;E7EPP6;O14757 J3KN87 278 292 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 0.0016844 81.676 By MS/MS By matching 1 1 2803800 1381000 1422800 1122 232 1161 2344;2345 1817 1817 170 1 VTTTKKTITTTEIMNK KTTTLAPKVTTTKKTI TTTEIMNKPEETAKPK K V T N K P 0 0 1 0 0 0 1 0 0 2 0 3 1 0 0 0 7 0 0 1 0 0 16 2 1808.9918 A0A0U1RR20;Q92954 A0A0U1RR20 942 957 PRG4 Proteoglycan 4;Proteoglycan 4 C-terminal part yes no 2 0.011263 41.283 By MS/MS 1 0 0 0 1123 99 1162 2346 1818 1818 19 694;695 1 VTTVAADQSFTIRDLVSGSVK LRRPLFQKVTTVAADQ DLVSGSVKLNVERCSL K V T V K L 2 1 0 2 0 1 0 1 0 1 1 1 0 1 0 3 3 0 0 4 0 0 21 1 2193.1641 P21709 P21709 145 165 EPHA1 Ephrin type-A receptor 1 yes yes 3 1.1838E-05 75.239 By matching By MS/MS 1 1 2622600 1390400 1232300 1124 537 1163 2347;2348 1819 1819 412 1 VVDYSQFQESDDADEDYGR SRPVRNRKVVDYSQFQ DADEDYGRDSGPPTKK K V V G R D 1 1 0 5 0 2 2 1 0 0 0 0 0 1 0 2 0 0 2 2 0 0 19 0 2236.9033 Q9H1E3 Q9H1E3 10 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 1.3766E-171 174.23 By MS/MS 1 73869000 0 73869000 1125 745 1164 2349 1820 1820 599;600 1 VVDYSQFQESDDADEDYGRDSGPPTKK SRPVRNRKVVDYSQFQ DSGPPTKKIRSSPREA K V V K K I 1 1 0 6 0 2 2 2 0 0 0 2 0 1 2 3 1 0 2 2 0 0 27 2 3047.3268 Q9H1E3 Q9H1E3 10 36 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3;4 6.8505E-06 59.005 By MS/MS By MS/MS 2 2 36207000 16881000 19327000 1126 745 1165 2350;2351;2352;2353 1821;1822;1823 1823 599;600 3 VVHGEDAVPYSWPWQVSLQYEK PSSHSSSRVVHGEDAV QVSLQYEKSGSFYHTC R V V E K S 1 0 0 1 0 2 2 1 1 0 1 1 0 0 2 2 0 2 2 4 0 0 22 0 2616.2649 B1AQ52;P09093 B1AQ52 29 50 CELA3A Chymotrypsin-like elastase family member 3A yes no 3 0.011682 40.137 By MS/MS By matching 1 1 3768300 2031900 1736400 1127 141 1166 2354;2355 1824 1824 1 VVNTDHGSPEQLQIPVTDSGR PSGSQRARVVNTDHGS IPVTDSGRHILEDSCA R V V G R H 0 1 1 2 0 2 1 2 1 1 1 0 0 0 2 2 2 0 0 3 0 0 21 0 2248.1084 Q6IQ49 Q6IQ49 271 291 SDE2 Protein SDE2 homolog yes yes 3 0.00058198 71.742 By matching By MS/MS 1 1 2399800 757500 1642300 1128 657 1167 2356;2357 1825 1825 826 1 VVPEDGSPEKR KEVQSSCRVVPEDGSP EDGSPEKRCPGGVLSC R V V K R C 0 1 0 1 0 0 2 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 11 1 1211.6146 Q02040 Q02040 531 541 AKAP17A A-kinase anchor protein 17A yes yes 2 0.0011781 86.911 By matching By MS/MS 1 2 1559200 527660 1031500 1129 590 1168 2358;2359;2360 1826;1827 1827 453 2 VVSVLTVLHQDWLNGK EQFNSTYRVVSVLTVL HQDWLNGKEYKCKVSN R V V G K E 0 0 1 1 0 1 0 1 1 0 3 1 0 0 0 1 1 1 0 4 0 0 16 0 1806.9992 P01861;A0A0A0MS08;P01857;P01860 P01861 182 197 IGHG4;IGHG1;IGHG3 Ig gamma-4 chain C region;Ig gamma-1 chain C region;Ig gamma-3 chain C region yes no 2;3 3.1222E-134 172.58 By MS/MS By MS/MS 3 3 21623000 7651200 13972000 1130 482 1169;1170 2361;2362;2363;2364;2365;2366 1828;1829;1830;1831;1832;1833 1830 71 6 VVSVLTVVHQDWLNGK EQFNSTFRVVSVLTVV HQDWLNGKEYKCKVSN R V V G K E 0 0 1 1 0 1 0 1 1 0 2 1 0 0 0 1 1 1 0 5 0 0 16 0 1792.9836 P01859 P01859 181 196 IGHG2 Ig gamma-2 chain C region yes yes 2;3 1.5144E-267 194.12 By MS/MS By MS/MS 2 2 6516100 3133100 3383000 1131 481 1171 2367;2368;2369;2370 1834;1835;1836;1837;1838 1836 70 5 VVTPLSPPTNLHLEANPDTGVLTVSWER RDAPIVNKVVTPLSPP VLTVSWERSTTPDITG K V V E R S 1 1 2 1 0 0 2 1 1 0 4 0 0 0 4 2 4 1 0 4 0 0 28 0 3041.5822 P02751 P02751 1170 1197 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 3 0.0056967 47.507 By matching By MS/MS 1 1 14407000 8204400 6202500 1132 485 1172 2371;2372 1839 1839 1 VVVSPTKK AAATSAKKVVVSPTKK VVVSPTKKVAVATPAK K V V K K V 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 71 NCL Nucleolin yes no 2 0.0033078 125.71 By matching By MS/MS 1 1 56644000 25130000 31513000 1133 532 1173 2373;2374 1840 1840 411 1 VWPQQPSGELFEIEIDTLETTCHVLDPTPVAR LNQIDEVKVWPQQPSG LDPTPVARCSVRQLKE K V W A R C 1 1 0 2 1 2 4 1 1 2 3 0 0 1 4 1 4 1 0 3 0 0 32 0 3676.8083 C9JV77;P02765 C9JV77 68 99 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 3 0.0021996 42.894 By MS/MS 1 26827000 0 26827000 1134 191 1174 2375 1841 1841 1 VYENVGLMQQQK EMREDSARVYENVGLM VGLMQQQKSFR_____ R V Y Q K S 0 0 1 0 0 3 1 1 0 0 1 1 1 0 0 0 0 0 1 2 0 0 12 0 1435.7129 Q06124 Q06124 583 594 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 2 0.00067101 94.85 By MS/MS By MS/MS 2 2 4045700 1929200 2116600 1135 598 1175;1176 2376;2377;2378;2379 1842;1843 1843 77 932 2 VYESIGQYGGETVK LEPITDERVYESIGQY QYGGETVKIVRIEKAR R V Y V K I 0 0 0 0 0 1 2 3 0 1 0 1 0 0 0 1 1 0 2 2 0 0 14 0 1528.7409 Q8N3R9 Q8N3R9 242 255 MPP5 MAGUK p55 subfamily member 5 yes yes 2 0.0045598 53.569 By MS/MS By matching 1 1 1226300 540760 685530 1136 690 1177 2380;2381 1844 1844 946 1 VYNVTQHAVGIVVNK CYHGKTGRVYNVTQHA AVGIVVNKQGQDSCQE R V Y N K Q 1 0 2 0 0 1 0 1 1 1 0 1 0 0 0 0 1 0 1 5 0 0 15 0 1639.9046 G3V1B3;M0R181;P46778 G3V1B3 64 78 RPL21 60S ribosomal protein L21 yes no 3 0.0055084 46.964 By MS/MS By matching 1 1 461880 175900 285980 1137 318 1178 2382;2383 1845 1845 1 WDTGENPIYK EKEKMNAKWDTGENPI TGENPIYKSAVTTVVN K W D Y K S 0 0 1 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 0 0 0 10 0 1221.5666 P05556 P05556 775 784 ITGB1 Integrin beta-1 yes yes 2 0.0028622 80.239 By MS/MS 1 2497100 0 2497100 1138 495 1179 2384 1846 1846 918 1 WFYIASAFR TLDQITGKWFYIASAF FYIASAFRNEEYNKSV K W F F R N 2 1 0 0 0 0 0 0 0 1 0 0 0 2 0 1 0 1 1 0 0 0 9 0 1159.5815 P02763;P19652 P02763 43 51 ORM1;ORM2 Alpha-1-acid glycoprotein 1;Alpha-1-acid glycoprotein 2 yes no 2 0.01394 75.738 By MS/MS By matching 1 1 3826000 1756000 2070000 1139 486 1180 2385;2386 1847 1847 1 WGTDEAQFIYILGNR LYEAGELKWGTDEAQF FIYILGNRSKQHLRLV K W G N R S 1 1 1 1 0 1 1 2 0 2 1 0 0 1 0 0 1 1 1 0 0 0 15 0 1781.8737 P08133 P08133 192 206 ANXA6 Annexin A6 yes yes 2 0.00012755 94.465 By MS/MS 1 1803300 0 1803300 1140 503 1181 2387 1848 1848 1 WHWSSGSLVSYK HDPKKNRRWHWSSGSL SGSLVSYKSWGIGAPS R W H Y K S 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 4 0 2 1 1 0 0 12 0 1435.6884 P05451;H7BZ24;P48304 P05451 111 122 REG1A;REG1B Lithostathine-1-alpha;Lithostathine-1-beta yes no 3 0.001465 68.44 By MS/MS By MS/MS 1 1 642920 336900 306020 1141 493 1182 2388;2389 1849;1850 1850 2 WLDESDAEMELR FLAPDFDRWLDESDAE SDAEMELRAKEEERLN R W L L R A 1 1 0 2 0 0 3 0 0 0 2 0 1 0 0 1 0 1 0 0 0 0 12 0 1492.6504 H3BPZ1;H3BS72;Q9P035 H3BPZ1 85 96 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 2 0.0044767 89.43 By matching By MS/MS 1 1 3871600 1802000 2069600 1142 379 1183 2390;2391 1851 1851 295 1 WLNSGRGDEASEEGQNGSSPK KQQREKTRWLNSGRGD GQNGSSPKSKTKWTKE R W L P K S 1 1 2 1 0 1 3 4 0 0 1 1 0 0 1 4 0 1 0 0 0 0 21 1 2203.973 E7EV99;E7ENY0;P35611;H0Y9H2 E7EV99 447 467 ADD1 Alpha-adducin yes no 3 0.0046908 49.036 By MS/MS By matching 1 1 1031900 395070 636870 1143 228 1184 2392;2393 1852 1852 32;166 166;167 1 WLREAEEESDHN KSVTAFFKWLREAEEE AEEESDHN________ K W L H N - 1 1 1 1 0 0 4 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 12 1 1513.6433 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1425 1436 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 0.001256 86.214 By MS/MS By matching 1 1 1933700 784630 1149100 1144 241 1185 2394;2395 1853 1853 187 1 YADFSISPNAVSAEEDGYTLFVAGFEDGGAGDSLSYHSGQK ENNTAYAKYADFSISP LSYHSGQKFSTFDRDQ K Y A Q K F 5 0 1 4 0 1 3 6 1 1 2 1 0 3 1 6 1 0 3 2 0 0 41 0 4257.8927 K7ES70;P55083 K7ES70 169 209 MFAP4 Microfibril-associated glycoprotein 4 yes no 3 0.0017287 37.184 By MS/MS By MS/MS 1 1 78569000 24280000 54289000 1145 428 1186 2396;2397 1854;1855 1855 2 YADLPGIAR ________________ ADLPGIARNEPDVYET K Y A A R N 2 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 9 0 974.51853 F8W0U6;F8VRV7;F8VW18;F8W1I6;Q13561 F8W0U6 6 14 DCTN2 Dynactin subunit 2 yes no 2 0.0057956 74.127 By MS/MS By matching 1 1 1058900 515490 543370 1146 304 1187 2398;2399 1856 1856 895 1 YALQMEQLNGILLHLESELAQTR SLREVEARYALQMEQL ESELAQTRAEGQRQAQ R Y A T R A 2 1 1 0 0 3 3 1 1 1 6 0 1 0 0 1 1 0 1 0 0 0 23 0 2669.3847 F8VZY9;P05783 F8VZY9 331 353 KRT18 Keratin, type I cytoskeletal 18 yes no 3 0.0059953 42.123 By matching By MS/MS 1 1 3888300 2303800 1584500 1147 310 1188 2400;2401 1857 1857 33 1 YALYDATYETK MLPDKDCRYALYDATY YDATYETKESKKEDLV R Y A T K E 2 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 2 0 3 0 0 0 11 0 1336.6187 E9PQB7;G3V1A4;E9PP50;E9PK25;P23528;E9PLJ3;Q9Y281 E9PQB7 65 75 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2 0.0089264 66.299 By matching By MS/MS 1 1 452700 257670 195030 1148 263 1189 2402;2403 1858 1858 1 YATPQVIQAPGPR QSFASDPKYATPQVIQ VIQAPGPRAGPCILPI K Y A P R A 2 1 0 0 0 2 0 1 0 1 0 0 0 0 3 0 1 0 1 1 0 0 13 0 1396.7463 H0Y5H7;C9J1X3;Q07912 H0Y5H7 394 406 TNK2 Activated CDC42 kinase 1 yes no 2 0.005123 55.461 By MS/MS 1 224060 0 224060 1149 176 1190 2404 1859 1859 880 1 YEELQITAGR AESLYQSKYEELQITA ELQITAGRHGDSVRNS K Y E G R H 1 1 0 0 0 1 2 1 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1178.5932 CON__P04264;P04264;P04259 CON__P04264 377 386 KRT1;KRT6B Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 6B yes no 2 0.0044057 83.948 By MS/MS By matching 1 1 942650 513290 429360 + 1150 202 1191 2405;2406 1860 1860 1 YEPQSPGYEPR EFESQSPRYEPQSPGY QSPGYEPRSPGYEPRS R Y E P R S 0 1 0 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 2 0 0 0 11 0 1321.5939 H3BS42;Q9H5H4 H3BS42 90 100 ZNF768 Zinc finger protein 768 yes no 2 0.0051348 83.204 By MS/MS By matching 1 1 1882200 1043400 838840 1151 381 1192 2407;2408 1861 1861 297 1 YFAHSILTVSEEEWNTGETYTCVVAHEALPNR PEPQAPGRYFAHSILT AHEALPNRVTERTVDK R Y F N R V 3 1 2 0 1 0 5 1 2 1 2 0 0 1 1 2 4 1 2 3 0 0 32 0 3722.7311 A0A087WYJ9;A0A1B0GUU9;P04220;P01871 A0A087WYJ9 391 422 IGHM Ig mu heavy chain disease protein;Ig mu chain C region yes no 4 1.7434E-23 81.406 By MS/MS By MS/MS 1 1 20795000 9299500 11495000 1152 35 1193 2409;2410 1862;1863 1863 2 YFQISQDEDESESED DKETYELRYFQISQDE EDESESED________ R Y F E D - 0 0 0 3 0 2 4 0 0 1 0 0 0 1 0 3 0 0 1 0 0 0 15 0 1819.6908 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 107 121 RPL22L1 60S ribosomal protein L22-like 1 yes no 2 0.00942 59.607 By MS/MS By matching 1 1 13789000 7430200 6358300 1153 194 1194 2411;2412 1864 1864 146;147 1 YGLQDSDEEEEEHPSK FKVSHFSKYGLQDSDE EEEEHPSKTSTKKLKT K Y G S K T 0 0 0 2 0 1 5 1 1 0 1 1 0 0 1 2 0 0 1 0 0 0 16 0 1890.7755 P52948 P52948 883 898 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 2;3 0.00079344 73.809 By MS/MS By MS/MS 2 2 4464100 1864000 2600100 1154 571 1195 2413;2414;2415;2416 1865;1866 1866 442 2 YGMGTSVER IFICENNRYGMGTSVE GMGTSVERAAASTDYY R Y G E R A 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 1 1 0 1 1 0 0 9 0 998.44913 P08559 P08559 227 235 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.0047042 94.692 By MS/MS By MS/MS 3 3 16785000 7598600 9186500 1155 505 1196;1197 2417;2418;2419;2420;2421;2422 1867;1868;1869;1870 1869 59 397;789 4 YGRGSISLNSSPR YSDRSRNKYGRGSISL ISLNSSPRGRYSGKSQ K Y G P R G 0 2 1 0 0 0 0 2 0 1 1 0 0 0 1 4 0 0 1 0 0 0 13 1 1392.711 Q9NYL2 Q9NYL2 681 693 ZAK Mitogen-activated protein kinase kinase kinase MLT yes yes 2 0.013728 42.243 By MS/MS 1 0 0 0 1156 769 1198 2423 1871 1871 112 628;951 1 YHGHSMSDPGVSYR LMELQTYRYHGHSMSD SDPGVSYRTREEIQEV R Y H Y R T 0 1 0 1 0 0 0 2 2 0 0 0 1 0 1 3 0 0 2 1 0 0 14 0 1591.6838 P08559;Q5JPU3;P29803 P08559 289 302 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 3 0.00053261 88.992 By MS/MS By MS/MS 4 3 22553000 9022300 13531000 1157 505 1199;1200;1201;1202 2424;2425;2426;2427;2428;2429;2430 1872;1873;1874;1875;1876;1877 1873 60 398;399;400 6 YHIGDEILVSGGIGALVR KELANILKYHIGDEIL GGIGALVRLKSLQGDK K Y H V R L 1 1 0 1 0 0 1 4 1 3 2 0 0 0 0 1 0 0 1 2 0 0 18 0 1868.0156 H0Y8L3;Q15582 H0Y8L3 289 306 TGFBI Transforming growth factor-beta-induced protein ig-h3 yes no 3 0.0041932 48.883 By MS/MS By matching 1 1 1491500 778930 712620 1158 348 1203 2431;2432 1878 1878 1 YISLIYTNYEAGKDDYVK GVEDLRCKYISLIYTN AGKDDYVKALPGQLKP K Y I V K A 1 0 1 2 0 0 1 1 0 2 1 2 0 0 0 1 1 0 4 1 0 0 18 1 2154.0521 P09211 P09211 104 121 GSTP1 Glutathione S-transferase P yes yes 3 0.00099781 66.673 By MS/MS By matching 1 1 1322600 643310 679260 1159 510 1204 2433;2434 1879 1879 1 YLDFVFAVK RLNSSTIKYLDFVFAV LDFVFAVKNENRFYLK K Y L V K N 1 0 0 1 0 0 0 0 0 0 1 1 0 2 0 0 0 0 1 2 0 0 9 0 1100.5906 H0YCG2;P13473 H0YCG2 129 137 LAMP2 Lysosome-associated membrane glycoprotein 2 yes no 2 0.011265 82.241 By MS/MS By matching 1 1 1622900 807440 815460 1160 355 1205 2435;2436 1880 1880 1 YLEESDEDDLF VRAKKPIKYLEESDED ESDEDDLF________ K Y L L F - 0 0 0 3 0 0 3 0 0 0 2 0 0 1 0 1 0 0 1 0 0 0 11 0 1373.5511 P11388;J3QR57 P11388 1521 1531 TOP2A DNA topoisomerase 2-alpha yes no 2 0.0093524 76.282 By MS/MS By MS/MS 1 1 8327300 4175500 4151800 1161 519 1206 2437;2438 1881;1882 1881 405 2 YLGNATAIFFLPDEGK SSWVLLMKYLGNATAI FFLPDEGKLQHLENEL K Y L G K L 2 0 1 1 0 0 1 2 0 1 2 1 0 2 1 0 1 0 1 0 0 0 16 0 1754.8879 A0A0G2JRN3;A0A024R6I7;P01009 A0A0G2JRN3 268 283 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 1.575E-77 155.08 By MS/MS By MS/MS 1 1 17764000 7859100 9904700 1162 1 1207 2439;2440 1883;1884 1883 1 2 YLHPEGLPSDYTISFLFR ALVSQPTRYLHPEGLP YTISFLFRILPDTPQE R Y L F R I 0 1 0 1 0 0 1 1 1 1 3 0 0 2 2 2 1 0 2 0 0 0 18 0 2154.0786 Q05707;A0A0A0MQT7 Q05707 1276 1293 COL14A1 Collagen alpha-1(XIV) chain yes no 3 0.00062495 63.614 By MS/MS 1 5453700 0 5453700 1163 596 1208 2441 1885 1885 1 YLLDQSQKESQCLK KAEVEDLKYLLDQSQK QKESQCLKSELQAQKE K Y L L K S 0 0 0 1 1 3 1 0 0 0 3 2 0 0 0 2 0 0 1 0 0 0 14 1 1738.856 J3KNF5;O15078 J3KNF5 1694 1707 CEP290 Centrosomal protein of 290 kDa yes no 3 0.010968 47.189 By MS/MS 1 0 0 0 1164 408 1209 2442 1886 1886 195 318;907 1 YLQIIFLHSNSIAR PSGLPELKYLQIIFLH LHSNSIARVGVNDFCP K Y L A R V 1 1 1 0 0 1 0 0 1 3 2 0 0 1 0 2 0 0 1 0 0 0 14 0 1673.9253 Q9BXN1 Q9BXN1 313 326 ASPN Asporin yes yes 3 0.0028451 55.899 By matching By MS/MS 1 1 477990 200600 277390 1165 740 1210 2443;2444 1887 1887 1 YNLDASEEEDSNK EDDADLSKYNLDASEE SEEEDSNKKKSNRRSR K Y N N K K 1 0 2 2 0 0 3 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 13 0 1512.6216 O95218 O95218 183 195 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 2.6687E-09 120.21 By matching By MS/MS 1 1 2055900 926870 1129000 1166 464 1211 2445;2446 1888 1888 376 1 YQEDTCYGDAGSAFAVHDLEEDTWYATGILSFDK TFCAGMSKYQEDTCYG TGILSFDKSCAVAEYG K Y Q D K S 4 0 0 5 1 1 3 3 1 1 2 1 0 2 0 2 3 1 3 1 0 0 34 0 3873.6628 A0A087WU08;A0A0C4DGL8;J3QLC9;J3QR68;H0Y300;P00738 A0A087WU08 221 254 HP Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain yes no 3 0.00036481 45.349 By MS/MS By MS/MS 1 1 39153000 20301000 18852000 1167 17 1212 2447;2448 1889;1890 1890 2 YQQPFEDFR REGSFESRYQQPFEDF QQPFEDFRISQEHLAD R Y Q F R I 0 1 0 1 0 2 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 9 0 1228.5513 V9GY71;V9GYH5;P19174 V9GY71 71 79 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 2 0.0065262 71.501 By matching By MS/MS 1 1 1409200 648000 761250 1168 531 1213 2449;2450 1891 1891 923 1 YRSPYSGPK RDRRFRGRYRSPYSGP RSPYSGPKFNSAIRGK R Y R P K F 0 1 0 0 0 0 0 1 0 0 0 1 0 0 2 2 0 0 2 0 0 0 9 1 1053.5243 Q5QP22;Q5QP23;G3XAC6;Q14498 Q5QP22 95 103 RBM39 RNA-binding protein 39 yes no 2 1.1399E-10 137.4 By MS/MS By matching 1 1 9483100 3348900 6134200 1169 327 1214 2451;2452 1892 1892 264 1 YSHDFNFHINYGDLGFLGPEDLR RKVITFNRYSHDFNFH FLGPEDLRVFGSQNLT R Y S L R V 0 1 2 3 0 0 1 3 2 1 3 0 0 3 1 1 0 0 2 0 0 0 23 0 2725.2561 E9PJ21;A0A087WWI4;K7EQK2;A0A087X054;Q9Y4L1 E9PJ21 487 509 HYOU1 Hypoxia up-regulated protein 1 yes no 4 0.00036377 56.488 By matching By MS/MS 1 1 3772600 1663400 2109200 1170 28 1215 2453;2454 1893 1893 1 YSPSQNSPIHHIPSR SVGNGSSRYSPSQNSP PIHHIPSRRSPAKTIA R Y S S R R 0 1 1 0 0 1 0 0 2 2 0 0 0 0 3 4 0 0 1 0 0 0 15 0 1718.8489 E9PQN2;E9PKI6;E9PK91;Q9NYF8;E9PK09;E9PJA7;H0YF00 E9PQN2 282 296 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.013678 40.047 By MS/MS By matching 1 1 7330400 2469100 4861300 1171 264 1216 2455;2456 1894 1894 206;207 1 YSTLHTQSAEPPPPPEPAR VCEEPQVKYSTLHTQS PPPPEPARI_______ K Y S A R I 2 1 0 0 0 1 2 0 1 0 1 0 0 0 6 2 2 0 1 0 0 0 19 0 2074.012 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 176 CD99L2 CD99 antigen-like protein 2 yes no 3 0.0069679 53.773 By matching By MS/MS 1 1 822480 352400 470080 1172 95 1217 2457;2458 1895 1895 67;692;693;868 1 YSTLHTQSAEPPPPPEPARI VCEEPQVKYSTLHTQS PPPEPARI________ K Y S R I - 2 1 0 0 0 1 2 0 1 1 1 0 0 0 6 2 2 0 1 0 0 0 20 1 2187.096 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 177 CD99L2 CD99 antigen-like protein 2 yes no 3 1.6147E-05 73.928 By MS/MS By MS/MS 1 1 1642300 693750 948510 1173 95 1218 2459;2460 1896;1897;1898 1897 67;692;693;868 3 YTEFYHVPTHSDASK PRKHIVERYTEFYHVP PTHSDASKKRLIEDTE R Y T S K K 1 0 0 1 0 0 1 0 2 0 0 1 0 1 1 2 2 0 2 1 0 0 15 0 1780.8057 H0YBI4;Q96HC4 H0YBI4 106 120 PDLIM5 PDZ and LIM domain protein 5 yes no 3 0.0027528 53.038 By matching By MS/MS 1 1 1208000 710220 497780 1174 353 1219 2461;2462 1899 1899 901 1 YVELFLNSTAGASGGAYEHR DKANMQHRYVELFLNS SGGAYEHRYVELFLNS R Y V H R Y 3 1 1 0 0 0 2 3 1 0 2 0 0 1 0 2 1 0 2 1 0 0 20 0 2141.0178 G8JLB6;P31943;H0YB39 G8JLB6 356 375 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 3 0.010141 37.237 By matching By MS/MS 1 1 804820 340770 464060 1175 334 1220 2463;2464 1900 1900 0 YVLINWVGEDVPDAR DSQAALPKYVLINWVG GEDVPDARKCACASHV K Y V A R K 1 1 1 2 0 0 1 1 0 1 1 0 0 0 1 0 0 1 1 3 0 0 15 0 1744.8784 D6RFI1;D6R9W4;Q16643;D6RCR4 D6RFI1 80 94 DBN1 Drebrin yes no 2 0.0014179 79.82 By matching By MS/MS 1 1 1429000 506400 922620 1176 210 1221 2465;2466 1901 1901 1 YVSGSSPDLVTR DLASHRHKYVSGSSPD SSPDLVTRKVQLSVKT K Y V T R K 0 1 0 1 0 0 0 1 0 0 1 0 0 0 1 3 1 0 1 2 0 0 12 0 1279.6408 Q15678 Q15678 589 600 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 0.0087174 74.78 By matching By MS/MS 1 1 617450 244970 372470 1177 628 1222 2467;2468 1902 1902 486 1 YYVTIIDAPGHR LWKFETSKYYVTIIDA IIDAPGHRDFIKNMIT K Y Y H R D 1 1 0 1 0 0 0 1 1 2 0 0 0 0 1 0 1 0 2 1 0 0 12 0 1403.7197 Q5VTE0;P68104;A0A087WV01;A0A087WVQ9;A6PW80;Q5JR01 Q5VTE0 85 96 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha yes no 2;3 0.0017598 96.665 By MS/MS By MS/MS 2 2 2394400 1277500 1116900 1178 583 1223 2469;2470;2471;2472 1903;1904;1905;1906 1906 4 YYYAVYDMVVR SRMEIREKYYYAVYDM AVYDMVVRGNCFCYGH K Y Y V R G 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 4 3 0 0 11 0 1440.6748 E7EPA6;G3XAI2;P07942 E7EPA6 258 268 LAMB1 Laminin subunit beta-1 yes no 2 0.0095252 65.305 By matching By MS/MS 1 1 822550 456090 366450 1179 229 1224 2473;2474 1907 1907 1