Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count O Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Identification type 5ug_R1 Identification type 5ug_R2 Identification type 5ug_R3 Experiment 5ug_R1 Experiment 5ug_R2 Experiment 5ug_R3 Intensity Intensity 5ug_R1 Intensity 5ug_R2 Intensity 5ug_R3 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Deamidation (NQ) site IDs Oxidation (M) site IDs Phospho (STY) site IDs MS/MS Count AAAAAATAPPSPGPAQPGPR AAPARAPRAAAAAATA GPAQPGPRAQRAAPLA R A A P R A 8 1 0 0 0 1 0 2 0 0 0 0 0 0 6 1 1 0 0 0 0 0 20 0 1754.9064 Q6SPF0 Q6SPF0 151 170 SAMD1 Atherin yes yes 2;3 8.0873E-07 83.252 By MS/MS By MS/MS By MS/MS 2 2 2 22316000 6877600 8171200 7267300 0 1557 0 0;1;2;3;4;5 0;1;2;3;4;5;6 0 2114 7 AAAAAWEEPSSGNGTAR ________________ SSGNGTARAGPRKRGG K A A A R A 6 1 1 0 0 0 2 2 0 0 0 0 0 0 1 2 1 1 0 0 0 0 17 0 1644.7492 Q9P258 Q9P258 6 22 RCC2 Protein RCC2 yes yes 2 0.0007876 78.505 By matching By MS/MS By MS/MS 1 1 1 2501000 946120 721240 833680 1 1889 1 6;7;8 7;8 7 110 2665;3524 2 AAATPESQEPQAK EGTAQEGKAAATPESQ ESQEPQAKGAEASAAS K A A A K G 4 0 0 0 0 2 2 0 0 0 0 1 0 0 2 1 1 0 0 0 0 0 13 0 1326.6416 P49006 P49006 145 157 MARCKSL1 MARCKS-related protein yes yes 2 1.0618E-07 109.95 By MS/MS By MS/MS By MS/MS 2 1 1 10232000 4775700 3236500 2219500 2 1254 2 9;10;11;12 9;10;11;12;13;14 12 3328 6 AAAYDISEDEED PANLSRHKAAAYDISE DISEDEED________ K A A E D - 3 0 0 3 0 0 3 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 12 0 1326.5099 P49585 P49585 356 367 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 2 0.0077946 60.641 By MS/MS By matching By matching 1 1 1 11295000 3189000 4115400 3990500 3 1257 3 13;14;15 15 15 1649 1 AADRLPNLSSPSAEGPPGPPSGPAPR KFLEERAKAADRLPNL PPSGPAPRKKTQEKDD K A A P R K 4 2 1 1 0 0 1 3 0 0 2 0 0 0 8 4 0 0 0 0 0 0 26 1 2494.2564 O60784 O60784 453 478 TOM1 Target of Myb protein 1 yes yes 3 3.7746E-05 68.916 By matching By matching By MS/MS 1 1 1 9292800 3444500 3176800 2671500 4 1025 4 16;17;18 16 16 1373 1 AADSDDGAVSAPAASDGGVSK ________________ ASDGGVSKSTTSGEEL M A A S K S 6 0 0 4 0 0 0 3 0 0 0 1 0 0 1 4 0 0 0 2 0 0 21 0 1846.8181 Q96GM8 Q96GM8 2 22 TOE1 Target of EGR1 protein 1 yes yes 2 8.5527E-84 157.62 By MS/MS By MS/MS By MS/MS 1 1 1 15325000 5605100 5127700 4591900 5 1735 5 19;20;21 17;18;19 18 2382 3 AAEAGGAEEQYGFLTTPTK YVMAVVDKAAEAGGAE GFLTTPTKQLGAQSPG K A A T K Q 4 0 0 0 0 1 3 3 0 0 1 1 0 1 1 0 3 0 1 0 0 0 19 0 1939.9163 P46821 P46821 1052 1070 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0010146 74.987 By MS/MS By MS/MS 1 1 10858000 5227800 5630600 0 6 1245 6 22;23 20;21 21 3790 2 AAEDDEDDDVDTK AESATGKRAAEDDEDD EDDDVDTKKQKTDEDD R A A T K K 2 0 0 6 0 0 2 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 13 0 1436.5427 B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1;P06454 B8ZZQ6 87 99 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 2 1.734E-27 146.71 By MS/MS By MS/MS By MS/MS 2 4 2 7485800 2368600 3914500 1202600 7 384 7 24;25;26;27;28;29;30;31 22;23;24;25;26;27;28 26 6 AAEDDEDDDVDTKK AESATGKRAAEDDEDD DDDVDTKKQKTDEDD_ R A A K K Q 2 0 0 6 0 0 2 0 0 0 0 2 0 0 0 0 1 0 0 1 0 0 14 1 1564.6377 B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1;P06454 B8ZZQ6 87 100 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 2;3 1.791E-05 97.734 By matching By MS/MS By MS/MS 3 3 3 8454200 4464900 2443800 1545400 8 384 8 32;33;34;35;36;37;38;39;40 29;30;31;32 31 4 AAESETPGKSPEK LPASETPKAAESETPG TPGKSPEKKPKIKEEA K A A E K K 2 0 0 0 0 0 3 1 0 0 0 2 0 0 2 2 1 0 0 0 0 0 13 1 1329.6412 O76021;J3QSV6 O76021 418 430 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.0042276 73.386 By MS/MS By matching By matching 1 1 1 6657500 2098500 2459900 2099100 9 1045 9 41;42;43 33 33 1401 1 AAGGAPSPPPPVR GLKSRGSRAAGGAPSP PSPPPPVRRASAGPAP R A A V R R 3 1 0 0 0 0 0 2 0 0 0 0 0 0 5 1 0 0 0 1 0 0 13 0 1172.6302 Q4KMP7 Q4KMP7 672 684 TBC1D10B TBC1 domain family member 10B yes yes 2 0.0040606 69.352 By MS/MS By MS/MS By MS/MS 1 1 1 4524000 1536900 1546800 1440300 10 1473 10 44;45;46 34;35;36;37;38;39 35 1971 6 AAGLESAATIRTK SGSLIRKKAAGLESAA SAATIRTKVFVWGLND K A A T K V 4 1 0 0 0 0 1 1 0 1 1 1 0 0 0 1 2 0 0 0 0 0 13 1 1287.7147 A0A0J9YVP0;O95714 A0A0J9YVP0 195 207 HERC2 E3 ubiquitin-protein ligase HERC2 yes no 3 0.013196 48.044 By MS/MS By matching By matching 1 1 1 2745300 571020 838890 1335400 11 233 11 47;48;49 40 40 2946;2947 0 AAGSPSPLPAPDPAPK LVARYMSRAAGSPSPL PAPDPAPKSEPAAEEG R A A P K S 4 0 0 1 0 0 0 1 0 0 1 1 0 0 6 2 0 0 0 0 0 0 16 0 1471.7671 J3KRF7;J3KRY8;Q9BZE9 J3KRF7 104 119 ASPSCR1 Tether containing UBX domain for GLUT4 yes no 2 0.0040934 55.335 By MS/MS By MS/MS 1 1 1987500 0 1146300 841200 12 913 12 50;51 41;42;43 41 1224;1225 3 AAHTEDINACTLTTSPR ASEPSLHRAAHTEDIN CTLTTSPRLPVF____ R A A P R L 3 1 1 1 1 0 1 0 1 1 1 0 0 0 1 1 4 0 0 0 0 0 17 0 1856.8687 H7C155;P04049 H7C155 507 523 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 3 0.0016008 72.446 By MS/MS By MS/MS By MS/MS 1 1 1 8613200 2742000 3242800 2628500 13 863 13 52;53;54 44;45;46 45 1161;3189;3190 3 AAKLSEGSQPAEEEEDQETPSR SSRVRQARAAKLSEGS EDQETPSRNLRVRADR R A A S R N 3 1 0 1 0 2 6 1 0 0 1 1 0 0 2 3 1 0 0 0 0 0 22 1 2387.0725 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 178 199 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.0015116 69.259 By MS/MS By MS/MS By MS/MS 2 2 2 22362000 8811400 7610500 5940400 14 532 14;15 55;56;57;58;59;60 47;48;49;50;51;52 50 682;683 6 AAKNSEEEEEEK ALTAQNGKAAKNSEEE SEEEEEEKKKAAVVVS K A A E K K 2 0 1 0 0 0 6 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 12 1 1391.6052 A0A0A0MRM9;Q14978 A0A0A0MRM9 568 579 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.011028 66.533 By matching By MS/MS By matching 1 1 1 1644100 353400 918850 371880 15 137 16 61;62;63 53 53 182 1 AALAPAKESPR SGKTHQIRAALAPAKE APAKESPRKGAAPTPP R A A P R K 4 1 0 0 0 0 1 0 0 0 1 1 0 0 2 1 0 0 0 0 0 0 11 1 1109.6193 J3KQ96;E7ETY2;Q13428;H0YAB7 J3KQ96 898 908 TCOF1 Treacle protein yes no 2;3 2.4296E-05 123.95 By MS/MS By MS/MS By MS/MS 2 2 2 89493000 34071000 29597000 25825000 16 545 17 64;65;66;67;68;69 54;55;56;57;58;59;60;61;62 59 704 9 AALEYLGSFDHYAT DQYQLCYRAALEYLGS GSFDHYAT________ R A A A T - 3 0 0 1 0 0 1 1 1 0 2 0 0 1 0 1 1 0 2 0 0 0 14 0 1556.7147 H0Y380;H0Y4H1;H0Y7Z9;H0Y6Z7;P10586;Q3KPI9;F5GWR7;P23468 H0Y380 966 979 PTPRF;PTPRD Receptor-type tyrosine-protein phosphatase F;Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta yes no 2 0.0057735 76.465 By MS/MS By matching By MS/MS 1 1 1 13459000 5711000 3470200 4277300 17 745 18 70;71;72 63;64 64 3160 2 AALLKASPK NEVKKLQKAALLKASP ALLKASPKKAPGTKGT K A A P K K 3 0 0 0 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 9 1 897.56475 P50914 P50914 133 141 RPL14 60S ribosomal protein L14 yes yes 2 0.0031934 100.09 By MS/MS By MS/MS By MS/MS 1 1 1 48583000 19550000 15600000 13433000 18 1271 19 73;74;75 65;66;67 65 1678 3 AAMYDIISSPSKDSTK DEKEQSEKAAMYDIIS SPSKDSTKLTLRLSRV K A A T K L 2 0 0 2 0 0 0 0 0 2 0 2 1 0 1 4 1 0 1 0 0 0 16 1 1712.8291 Q6KC79 Q6KC79 342 357 NIPBL Nipped-B-like protein yes yes 2 0.003389 64.327 By MS/MS 1 1690900 0 1690900 0 19 1539 20 76 68 68 2092 1 AAPEASSPPASPLQHLLPGK AGESPQPKAAPEASSP LQHLLPGKAVDLGPPK K A A G K A 4 0 0 0 0 1 1 1 1 0 3 1 0 0 5 3 0 0 0 0 0 0 20 0 1967.0476 Q96TA1 Q96TA1 686 705 FAM129B Niban-like protein 1 yes yes 3 0.015034 40.602 By matching By MS/MS By matching 1 1 1 4003900 1684500 1210600 1108800 20 1764 21 77;78;79 69 69 2445;2446 1 AAPQSPSVPK QELVNQSKAAPQSPSV PQSPSVPKKPGPPVLS K A A P K K 2 0 0 0 0 1 0 0 0 0 0 1 0 0 3 2 0 0 0 1 0 0 10 0 980.5291 E9PF10;O75694 E9PF10 924 933 NUP155 Nuclear pore complex protein Nup155 yes no 2 0.0013931 102.53 By MS/MS By MS/MS By MS/MS 1 1 1 11602000 3806000 3977500 3818200 21 572 22 80;81;82 70;71;72;73 70 756;757 4 AASAPAKESPR SGKTSQVGAASAPAKE APAKESPRKGAAPAPP G A A P R K 4 1 0 0 0 0 1 0 0 0 0 1 0 0 2 2 0 0 0 0 0 0 11 1 1083.5673 J3KQ96;E7ETY2;Q13428 J3KQ96 373 383 TCOF1 Treacle protein yes no 2;3 6.774E-05 109.6 By MS/MS By MS/MS By MS/MS 2 3 2 150350000 52490000 58715000 39143000 22 545 23 83;84;85;86;87;88;89 74;75;76;77;78;79;80;81 80 705 7 AASLNYLNQPSAAPLQVSR PSSSNMKRAASLNYLN AAPLQVSRGLSASTMD R A A S R G 4 1 2 0 0 2 0 0 0 0 3 0 0 0 2 3 0 0 1 1 0 0 19 0 1999.0487 Q9NSK0 Q9NSK0 588 606 KLC4 Kinesin light chain 4 yes yes 2 0.0020795 67.275 By MS/MS By MS/MS By matching 1 1 1 4697300 1618200 1526500 1552500 23 1858 24 90;91;92 82;83 83 2618 2 AASLTEDRDR SQPEGLRKAASLTEDR SLTEDRDRGRDAVKRE K A A D R G 2 2 0 2 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 10 1 1132.5473 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1044 1053 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 0.0069364 75.229 By matching By MS/MS By matching 1 1 1 11496000 4432400 3581000 3482600 24 550 25 93;94;95 84 84 722 1 AASPESASSTPESLQAR GDEDASGRAASPESAS TPESLQARRHHQFLEP R A A A R R 4 1 0 0 0 1 2 0 0 0 1 0 0 0 2 5 1 0 0 0 0 0 17 0 1687.8013 Q96BT3 Q96BT3 395 411 CENPT Centromere protein T yes yes 2 0.0015999 62.14 By matching By MS/MS By matching 1 1 1 1830000 357150 738340 734520 25 1722 26 96;97;98 85 85 2365 1 AASPPASASDLIEQQQK IKVIRNMRAASPPASA DLIEQQQKRGRREHKA R A A Q K R 4 0 0 1 0 3 1 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 17 0 1739.869 Q5VSL9 Q5VSL9 333 349 STRIP1 Striatin-interacting protein 1 yes yes 2 1.3665E-17 110.04 By MS/MS By MS/MS By MS/MS 1 1 1 9666600 3743400 3034000 2889100 26 1517 27 99;100;101 86;87;88 86 2053 3 AASPSPQSVR PEPKKIKKAASPSPQS SPSPQSVRRVSSSRSV K A A V R R 2 1 0 0 0 1 0 0 0 0 0 0 0 0 2 3 0 0 0 1 0 0 10 0 998.51451 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 745 754 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0014644 84.188 By MS/MS By MS/MS By matching 1 1 1 6843000 2332100 2635400 1875500 27 322 28 102;103;104 89;90 89 428 2 AASQGSDSPLLPAQR AKGRLAERAASQGSDS SPLLPAQRNSIPVSPV R A A Q R N 3 1 0 1 0 2 0 1 0 0 2 0 0 0 2 3 0 0 0 0 0 0 15 0 1496.7583 H0Y507;Q5TCZ1 H0Y507 963 977 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.0085734 51.03 By MS/MS By MS/MS By matching 1 1 1 2782900 825690 1024100 933170 28 756 29 105;106;107 91;92 91 1032 2 AASREEPIEWEF SIIHRLEKAASREEPI EEPIEWEF________ K A A E F - 2 1 0 0 0 0 4 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 12 1 1462.6729 P39880 P39880 1494 1505 CUX1 Homeobox protein cut-like 1 yes yes 2 0.014141 60.401 By matching By MS/MS By matching 1 1 1 7641700 2791800 2768500 2081400 29 1229 30 108;109;110 93 93 1588 1 AASSAAQGAFQGN FSSRTFHRAASSAAQG AQGAFQGN________ R A A G N - 5 0 1 0 0 2 0 2 0 0 0 0 0 1 0 2 0 0 0 0 0 0 13 0 1178.5316 O15127 O15127 317 329 SCAMP2 Secretory carrier-associated membrane protein 2 yes yes 2 0.012693 52.071 By MS/MS By matching By matching 1 1 1 2236400 552560 952120 731700 30 991 31 111;112;113 94 94 1325 1 AASSSSPGSPVASSPSR FEKPESPRAASSSSPG PVASSPSRLSPTPDGP R A A S R L 3 1 0 0 0 0 0 1 0 0 0 0 0 0 3 8 0 0 0 1 0 0 17 0 1530.7274 Q92538 Q92538 1776 1792 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 2 0.0052143 53.169 By matching By MS/MS By MS/MS 1 1 1 3115000 725140 1393700 996170 31 1694 32 114;115;116 95;96 96 2322;2323 2 AASSSSVVPYLPR EVAEELGRAASSSSVV SVVPYLPRLPILPSKT R A A P R L 2 1 0 0 0 0 0 0 0 0 1 0 0 0 2 4 0 0 1 2 0 0 13 0 1332.7038 P42684 P42684 559 571 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0025813 73.841 By matching By MS/MS By matching 1 1 1 1656500 588110 601960 466430 32 1238 33 117;118;119 97 97 3785 1 AASVPCSVAPEK QRRDGGGRAASVPCSV PCSVAPEKSVCRPQPL R A A E K S 3 0 0 0 1 0 1 0 0 0 0 1 0 0 2 2 0 0 0 2 0 0 12 0 1214.5965 D6RFX7;Q9C073 D6RFX7 65 76 FAM117A Protein FAM117A yes no 2 0.0078018 60.628 By matching By MS/MS By matching 1 1 1 2126200 793790 647160 685240 33 496 34 120;121;122 98 98 638 1 AAVGQESPGGLEAGNAK PINKGRKRAAVGQESP GLEAGNAKAPKLQDLA R A A A K A 4 0 1 0 0 1 2 4 0 0 1 1 0 0 1 1 0 0 0 1 0 0 17 0 1554.7638 Q29RF7 Q29RF7 1299 1315 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 2.3577E-32 133.9 By MS/MS By MS/MS By MS/MS 1 1 1 17128000 6222500 6152800 4752200 34 1461 35 123;124;125 99;100;101 100 1957 3 AAVLSDSEDEEKASAK EEKVAKRKAAVLSDSE DEEKASAKKSRVVSDA K A A A K K 4 0 0 2 0 0 3 0 0 0 1 2 0 0 0 3 0 0 0 1 0 0 16 1 1648.7792 Q96ST2 Q96ST2 394 409 IWS1 Protein IWS1 homolog yes yes 2 0.0040294 79.317 By MS/MS 1 2130300 0 0 2130300 35 1759 36 126 102 102 2431;2432 1 AAVSAFPTDSLER QSFFAAARAAVSAFPT FPTDSLERDLSPSSAP R A A E R D 3 1 0 1 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 1 0 0 13 0 1362.6779 O14654 O14654 1098 1110 IRS4 Insulin receptor substrate 4 yes yes 2 5.3578E-05 90.861 By matching By MS/MS By matching 1 1 1 10987000 3565800 3299600 4121800 36 982 37 127;128;129 103 103 1305 1 AAVVTSPPPTTAPHK ________________ PPTTAPHKERYFDRVD R A A H K E 3 0 0 0 0 0 0 0 1 0 0 1 0 0 4 1 3 0 0 2 0 0 15 0 1472.7987 E7EV99;E7ENY0;P35611;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 E7EV99 7 21 ADD1 Alpha-adducin yes no 2 1.9821E-18 121.42 By MS/MS By MS/MS By MS/MS 1 1 1 18216000 6668200 7116400 4431900 37 523 38 130;131;132 104;105;106;107;108;109;110 107 665;3052 7 AAVVTSPPPTTAPHKER ________________ TTAPHKERYFDRVDEN R A A E R Y 3 1 0 0 0 0 1 0 1 0 0 1 0 0 4 1 3 0 0 2 0 0 17 1 1757.9424 E7EV99;E7ENY0;P35611;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 E7EV99 7 23 ADD1 Alpha-adducin yes no 3 0.0056901 64.52 By MS/MS By matching By MS/MS 1 1 1 10220000 5082200 2648500 2489900 38 523 39 133;134;135 111;112 111 665;3052 2 ACLDDSYASGEGLKR SGNGTLSRACLDDSYA ASGEGLKRSALSSSLR R A C K R S 2 1 0 2 1 0 1 2 0 0 2 1 0 0 0 2 0 0 1 0 0 0 15 1 1640.7464 A0A087WWK8;Q6DN90;A0A0C4DGT3 A0A087WWK8 891 905 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2;3 4.13E-30 120.77 By matching By MS/MS By MS/MS 1 1 2 3751900 1188900 1065000 1498000 39 64 40 136;137;138;139 113;114;115;116 116 80;3578 2 ACNLDVILGFDGSR PGVTDAAKACNLDVIL ILGFDGSRDQNVFVAQ K A C S R D 1 1 1 2 1 0 0 2 0 1 2 0 0 1 0 1 0 0 0 1 0 0 14 0 1535.7402 E7ENL6;P12111 E7ENL6 1227 1240 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.00019329 85.813 By MS/MS By MS/MS By MS/MS 1 1 1 1502100 603530 424990 473620 40 522 41 140;141;142 117;118;119 117 3 ACPEEPAAPSPEPR ELASPEERACPEEPAA AAPSPEPRVWLEDPAS R A C P R V 3 1 0 0 1 0 3 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 14 0 1506.6773 O94819 O94819 98 111 KBTBD11 Kelch repeat and BTB domain-containing protein 11 yes yes 2 0.016681 47.774 By MS/MS By matching By matching 1 1 1 1870900 716750 960310 193890 41 1052 42 143;144;145 120 120 1413 1 ACPGPPPPSPEPLAR DDSSRPSRACPGPPPP PSPEPLARLALAMELS R A C A R L 2 1 0 0 1 0 1 1 0 0 1 0 0 0 7 1 0 0 0 0 0 0 15 0 1541.766 A0A087WSV0;Q9HB09 A0A087WSV0 181 195 BCL2L12 Bcl-2-like protein 12 yes no 2 0.0023605 66.059 By matching By matching By MS/MS 1 1 1 2355200 717860 830080 807240 42 18 43 146;147;148 121 121 19 1 ADAVQDSEMVELVELEIR HVVVYVNKADAVQDSE ELVELEIRELLTEFGY K A D I R E 2 1 0 2 0 1 4 0 0 1 2 0 1 0 0 1 0 0 0 3 0 0 18 0 2044.9987 P49411 P49411 183 200 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.0025186 54.974 By MS/MS 1 342950 342950 0 0 43 1255 44 149 122 122 118 1 ADDADEFGYSR LWRYGDFRADDADEFG ADEFGYSR________ R A D S R - 2 1 0 3 0 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 0 11 0 1244.4946 Q7KZF4 Q7KZF4 900 910 SND1 Staphylococcal nuclease domain-containing protein 1 yes yes 2 0.00083003 101.65 By MS/MS By MS/MS By MS/MS 1 1 1 3076200 1048200 1080100 947870 44 1571 45 150;151;152 123;124;125 123 2135;3868 3 ADGEYWLGLQNMHLLTLK DYKLGFGRADGEYWLG NMHLLTLKQKYELRVD R A D L K Q 1 0 1 1 0 1 1 2 1 0 5 1 1 0 0 0 1 1 1 0 0 0 18 0 2101.0666 K7ES70;P55083 K7ES70 131 148 MFAP4 Microfibril-associated glycoprotein 4 yes no 3 0.00064042 73.208 By MS/MS By matching By MS/MS 2 2 2 4694900 2287100 894540 1513300 45 955 46;47 153;154;155;156;157;158 126;127 126 68 2 ADGGAEYATYQTK QRRKKKGKADGGAEYA EYATYQTKSTTPAEQR K A D T K S 3 0 0 1 0 1 1 2 0 0 0 1 0 0 0 0 2 0 2 0 0 0 13 0 1373.6099 R4GN18 R4GN18 57 69 CD46 yes yes 2 0.00067813 86.463 By MS/MS By matching By MS/MS 1 1 1 2254300 828670 843630 582030 46 1982 48 159;160;161 128;129 129 3562;3942 2 ADGYEPPVQESV ETGAKVERADGYEPPV EPPVQESV________ R A D S V - 1 0 0 1 0 1 2 1 0 0 0 0 0 0 2 1 0 0 1 2 0 0 12 0 1289.5776 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 216 227 RPS3A 40S ribosomal protein S3a yes no 2 0.008112 60.064 By MS/MS By matching By matching 1 1 1 6584700 2456400 1995600 2132700 47 486 49 162;163;164 130 130 629 1 ADIVFLLDGSINFR PSRPEKKKADIVFLLD LDGSINFRRDSFQEVL K A D F R R 1 1 1 2 0 0 0 1 0 2 2 0 0 2 0 1 0 0 0 1 0 0 14 0 1578.8406 E7ENL6;P12111 E7ENL6 1031 1044 COL6A3 Collagen alpha-3(VI) chain yes no 2 2.1786E-05 100.55 By MS/MS By MS/MS By MS/MS 2 2 2 14434000 7620900 2682500 4131000 48 522 50 165;166;167;168;169;170 131;132;133;134;135;136 131 6 ADIVFLVDGSYSIGIANFVK CSRGVDIKADIVFLVD IGIANFVKVRAFLEVL K A D V K V 2 0 1 2 0 0 0 2 0 3 1 1 0 2 0 2 0 0 1 3 0 0 20 0 2127.1252 D6RGG3;Q99715 D6RGG3 439 458 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0038849 82.34 By matching By MS/MS By MS/MS 1 1 1 20912000 6570400 5297500 9044200 49 497 51 171;172;173 137;138 137 2 ADLINNLGTIAK DTGIGMTKADLINNLG NNLGTIAKSGTKAFME K A D A K S 2 0 2 1 0 0 0 1 0 2 2 1 0 0 0 0 1 0 0 0 0 0 12 0 1241.698 P08238;Q58FF8;P07900;Q14568 P08238 96 107 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 no no 2 0.0026944 81.017 By matching By MS/MS 1 1 3776000 930720 2845300 0 50 1126;1122 52 174;175 139 139 1 ADMVIEAVFEDLSLK LDYQGFEKADMVIEAV VFEDLSLKHRVLKEVE K A D L K H 2 0 0 2 0 0 2 0 0 1 2 1 1 1 0 1 0 0 0 2 0 0 15 0 1678.8488 P40939 P40939 441 455 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0080782 55.258 By MS/MS 1 0 0 0 0 51 1232 53 176 140 140 114 1 ADRDQSPFSK SNNSREKKADRDQSPF RDQSPFSKIKQSSQDN K A D S K I 1 1 0 2 0 1 0 0 0 0 0 1 0 1 1 2 0 0 0 0 0 0 10 1 1149.5415 E9PG73;Q13427 E9PG73 667 676 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 2 0.0085985 69.261 By matching By MS/MS 1 1 1772700 742860 1029800 0 52 581 54 177;178 141 141 763 1 ADSDSEDKGEESKPK KSEGGKRKADSDSEDK KGEESKPKKKKEESEK K A D P K K 1 0 0 3 0 0 3 1 0 0 0 3 0 0 1 3 0 0 0 0 0 0 15 2 1620.7115 C9JWS9;K7ELA4;B5MD17;J3KS05;P83916 C9JWS9 87 101 CBX1 Chromobox protein homolog 1 yes no 3 0.011173 59.606 By MS/MS By matching By matching 1 1 1 5062900 1449000 1972500 1641400 53 366 55 179;180;181 142 142 493 1 ADSPVNGLPK LEGAKKAKADSPVNGL SPVNGLPKGRESRSRS K A D P K G 1 0 1 1 0 0 0 1 0 0 1 1 0 0 2 1 0 0 0 1 0 0 10 0 996.52401 A0A0A0MSF3;Q96S94 A0A0A0MSF3 194 203 CCNL2 Cyclin-L2 yes no 2 0.0050817 67.93 By matching By matching By MS/MS 1 1 1 2476100 820110 946340 709670 54 149 56 182;183;184 143 143 199 1 AEADIVLLVDGSWSIGR SGMECLTRAEADIVLL DGSWSIGRANFRTVRS R A E G R A 2 1 0 2 0 0 1 2 0 2 2 0 0 0 0 2 0 1 0 2 0 0 17 0 1799.9418 D6RGG3;Q99715;A0A087X0A8 D6RGG3 1196 1212 COL12A1 Collagen alpha-1(XII) chain yes no 2;3 6.4607E-175 188.39 By MS/MS By MS/MS By MS/MS 22 22 19 81935000 27923000 27975000 26037000 55 497 57 185;186;187;188;189;190;191;192;193;194;195;196;197;198;199;200;201;202;203;204;205;206;207;208;209;210;211;212;213;214;215;216;217;218;219;220;221;222;223;224;225;226;227;228;229;230;231;232;233;234;235;236;237;238;239;240;241;242;243;244;245;246;247 144;145;146;147;148;149;150;151;152;153;154;155;156;157;158;159;160;161;162;163;164;165;166;167;168;169;170;171;172;173;174;175;176;177;178;179;180;181;182;183;184;185;186;187;188;189;190;191;192;193;194;195 145 46 AEALEVFCDMTSDGGGWIVFLR TIYLNGDKAEALEVFC GGWIVFLRRKNGRENF K A E L R R 2 1 0 2 1 0 2 3 0 1 2 0 1 2 0 1 1 1 0 2 0 0 22 0 2472.1454 F5H7V9;E9PC84;J3QSU6;P24821;H0YGZ3 F5H7V9 1644 1665 TNC Tenascin yes no 2 9.6387E-27 103.85 By MS/MS By matching By MS/MS 1 1 1 7185400 3977900 1440900 1766600 56 563 58 248;249;250 196;197 197 41 2 AEAPSQVRLMDVVSKK RLAWLAVRAEAPSQVR LMDVVSKKHPVDTLFF R A E K K H 2 1 0 1 0 1 1 0 0 0 1 2 1 0 1 2 0 0 0 3 0 0 16 2 1756.9506 G5E9W2;Q9P2E5 G5E9W2 560 575 CHPF2 Chondroitin sulfate glucuronyltransferase yes no 3 0.0092686 48.177 By MS/MS By matching By matching 1 1 1 1753300 579910 680840 492520 57 739 59 251;252;253 198 198 1005;1006 0 AEDGATPSPSNETPK ASSTSSPKAEDGATPS SPSNETPKKKKKRFSF K A E P K K 2 0 1 1 0 0 2 1 0 0 0 1 0 0 3 2 2 0 0 0 0 0 15 0 1499.674 P29966 P29966 138 152 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 9.3578E-298 214.67 By MS/MS By MS/MS By MS/MS 2 4 3 39434000 11040000 17041000 11352000 58 1205 60;61 254;255;256;257;258;259;260;261;262 199;200;201;202;203;204;205;206;207;208;209 205 1556;1557;3310;3311 11 AEDGATPSPSNETPKK ASSTSSPKAEDGATPS PSNETPKKKKKRFSFK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 2 0 0 3 2 2 0 0 0 0 0 16 1 1627.7689 P29966 P29966 138 153 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2;3 1.4562E-16 113.01 By MS/MS By MS/MS By MS/MS 4 4 4 22008000 6304400 9675000 6028700 59 1205 62;63 263;264;265;266;267;268;269;270;271;272;273;274 210;211;212;213;214;215;216 212 1556;1557;3310;3311 6 AEDGATPSPSNETPKKK ASSTSSPKAEDGATPS SNETPKKKKKRFSFKK K A E K K K 2 0 1 1 0 0 2 1 0 0 0 3 0 0 3 2 2 0 0 0 0 0 17 2 1755.8639 P29966 P29966 138 154 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.00061341 75.319 By MS/MS By MS/MS By MS/MS 2 3 3 89919000 28779000 38927000 22214000 60 1205 64;65 275;276;277;278;279;280;281;282 217;218;219;220;221;222;223 223 1556;1557;3310;3311 7 AEDTKAQINMFGR HFKGASTRAEDTKAQI AQINMFGREIVEMLLE R A E G R E 2 1 1 1 0 1 1 1 0 1 0 1 1 1 0 0 1 0 0 0 0 0 13 1 1479.714 J3QTJ6;Q5CZC0;H7BZL6 J3QTJ6 2995 3007 FSIP2 Fibrous sheath-interacting protein 2 yes no 3 0.0096295 52.928 By MS/MS 1 0 0 0 0 61 928 66 283 224 224 3219 1 AEEDEILNRSPR EEEDRKPKAEEDEILN EILNRSPRNRKPRRE_ K A E P R N 1 2 1 1 0 0 3 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1427.7005 P27824 P27824 574 585 CANX Calnexin yes yes 2 0.0078622 62.89 By matching By MS/MS By MS/MS 1 1 2 325460000 1822700 2173500 321460000 62 1198 67;68 284;285;286;287 225;226 225 71 1547 2 AEEKENDTVTISPK LAPEANPKAEEKENDT DTVTISPKQEGFPPKG K A E P K Q 1 0 1 1 0 0 3 0 0 1 0 2 0 0 1 1 2 0 0 1 0 0 14 1 1559.7679 Q9UGU0 Q9UGU0 1511 1524 TCF20 Transcription factor 20 yes yes 2 0.0034145 70.728 By MS/MS By matching By MS/MS 1 1 1 4809400 2063500 1648700 1097200 63 1903 69 288;289;290 227;228 227 2679 2 AEEKSPISINVK PSSPREVKAEEKSPIS SPISINVKTVKKEPED K A E V K T 1 0 1 0 0 0 2 0 0 2 0 2 0 0 1 2 0 0 0 1 0 0 12 1 1313.7191 Q9UK58 Q9UK58 348 359 CCNL1 Cyclin-L1 yes yes 2;3 6.2712E-264 214.58 By matching By MS/MS By MS/MS 1 1 2 28665000 8843800 9121300 10700000 64 1912 70 291;292;293;294 229;230;231 229 2695 3 AEFAEYASVDR PGPQTEGKAEFAEYAS AEYASVDRNKKCRQSV K A E D R N 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 11 0 1256.5673 Q9NWQ8 Q9NWQ8 222 232 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 4.0499E-05 109.66 By MS/MS By MS/MS By MS/MS 1 1 1 7857000 1803400 2956000 3097700 65 1870 71 295;296;297 232;233;234 232 2641;3917 3 AEFTSPPSLFK ETALPSTKAEFTSPPS TSPPSLFKTGLPPSRN K A E F K T 1 0 0 0 0 0 1 0 0 0 1 1 0 2 2 2 1 0 0 0 0 0 11 0 1222.6234 Q6UN15;A0A0B4J203 Q6UN15 255 265 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 no no 2 0.0021968 78.903 By MS/MS By matching By matching 1 1 1 1247900 546840 408070 293010 66 1558;176 72 298;299;300 235 235 241 1 AEGEPQEESPLKSK SQEKQTKKAEGEPQEE EESPLKSKSQEEPKDT K A E S K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 2 0 0 0 0 0 0 14 1 1527.7417 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09;E9PJA7 E9PK91 169 182 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 1.1532E-73 167.92 By MS/MS By MS/MS By MS/MS 1 1 1 11515000 5087100 3855100 2573200 67 596 73 301;302;303 236;237;238 236 791 3 AEGEWEDQEALDYFSDKESGK EKGSEKGRAEGEWEDQ FSDKESGKQKFNDSEG R A E G K Q 2 0 0 3 0 1 5 2 0 0 1 2 0 1 0 2 0 1 1 0 0 0 21 1 2432.0292 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 371 391 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0022986 61.959 By MS/MS By MS/MS By MS/MS 1 1 1 16190000 6877100 3913800 5399200 68 596 74 304;305;306 239;240;241 240 792 3 AEIYALNR QELKQRQRAEIYALNR AEIYALNRVMTELEQQ R A E N R V 2 1 1 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 8 0 948.50288 Q8N300 Q8N300 37 44 CCDC23 Coiled-coil domain-containing protein 23 yes yes 2 0.0089598 101.69 By MS/MS By matching By MS/MS 1 1 1 2566600 803370 1078900 684330 69 1626 75 307;308;309 242;243 243 3873 2 AEPSEVDMNSPK KAKQVKKKAEPSEVDM EVDMNSPKSKKAKKKE K A E P K S 1 0 1 1 0 0 2 0 0 0 0 1 1 0 2 2 0 0 0 1 0 0 12 0 1302.5762 Q9NR30 Q9NR30 62 73 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.0050465 68.847 By matching By MS/MS By matching 1 1 1 2270600 532090 967150 771380 70 1850 76 310;311;312 244 244 2600 1 AEPVEVVAPR SPWGAEVKAEPVEVVA PVEVVAPRGKSGAALS K A E P R G 2 1 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 3 0 0 10 0 1065.5819 P09874 P09874 487 496 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0087864 68.224 By matching By MS/MS By matching 1 1 1 12315000 3889100 4704100 3722000 71 1131 77 313;314;315 245 245 1 AESPAEKVPEESVLPLVQK LSSPSDTKAESPAEKV SVLPLVQKSTLADYSA K A E Q K S 2 0 0 0 0 1 4 0 0 0 2 2 0 0 3 2 0 0 0 3 0 0 19 1 2049.0994 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 430 448 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.0060673 51.535 By matching By matching By MS/MS 1 1 1 3165400 1041100 869610 1254700 72 532 78 316;317;318 246 246 684 1 AESPESSAIESTQSTPQK VSRRAQQRAESPESSA STQSTPQKGRGRPSKT R A E Q K G 2 0 0 0 0 2 3 0 0 1 0 1 0 0 2 5 2 0 0 0 0 0 18 0 1875.8698 Q9NTI5 Q9NTI5 1356 1373 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 2;3 0.0060662 63.488 By MS/MS By MS/MS By MS/MS 2 2 2 19248000 6093200 7741000 5414000 73 1860 79;80 319;320;321;322;323;324 247;248;249 248 2620;2621;2622;3514;3515 3 AESPSPAPPPGLR VAEGGLPRAESPSPAP PAPPPGLRGTLDLQVI R A E L R G 2 1 0 0 0 0 1 1 0 0 1 0 0 0 5 2 0 0 0 0 0 0 13 0 1274.6619 Q9BUA3 Q9BUA3 306 318 C11orf84 Uncharacterized protein C11orf84 yes yes 2 0.0015769 78.287 By MS/MS By matching By matching 1 1 1 12609000 4389300 4570900 3649100 74 1782 81 325;326;327 250 250 2475 1 AETEKQSPPHGEAK EVALEEIKAETEKQSP SPPHGEAKAGSSTLPP K A E A K A 2 0 0 0 0 1 3 1 1 0 0 2 0 0 2 1 1 0 0 0 0 0 14 1 1507.7267 Q9Y6D6;E5RJN9 Q9Y6D6 46 59 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes no 3 0.016538 46.156 By matching By matching By MS/MS 1 1 1 1899300 457920 1128500 312900 75 1979 82 328;329;330 251 251 2831 1 AETQEEKTVK TLSYKTVKAETQEEKT TQEEKTVKKRYDFMVF K A E V K K 1 0 0 0 0 1 3 0 0 0 0 2 0 0 0 0 2 0 0 1 0 0 10 1 1161.5877 J3KRM0;Q6X784 J3KRM0 118 127 ZPBP2 Zona pellucida-binding protein 2 yes no 2 0.00074345 80.219 By MS/MS 1 486960 0 486960 0 76 914 83 331 252 252 3215 0 AETSEGSGSAPAVPEASASPK AEPAEAGKAETSEGSG PEASASPKQRRSIIRD K A E P K Q 5 0 0 0 0 0 3 2 0 0 0 1 0 0 3 5 1 0 0 1 0 0 21 0 1928.8963 A0A087X1U4;P51608;A0A087WVW7;A0A0D9SFX7;B5MCB4 A0A087X1U4 58 78 MECP2 Methyl-CpG-binding protein 2 yes no 2 0.01704 43.37 By matching By MS/MS By matching 1 1 1 4814200 1237100 2035300 1541800 77 108 84 332;333;334 253 253 138 1 AETVIQTVKEVLK VRSISVMRAETVIQTV QTVKEVLKQPPAIAKD R A E L K Q 1 0 0 0 0 1 2 0 0 1 1 2 0 0 0 0 2 0 0 3 0 0 13 1 1456.8501 Q5TA12;Q5JWR5 Q5TA12 1862 1874 DOPEY1 Protein dopey-1 yes no 2 0.017874 44.863 By MS/MS By matching By matching 1 1 1 7278700 2625000 2443300 2210400 78 1491 85 335;336;337 254 254 3406;3407 1 AFENVTDLQWLILDHNLLENSK QIDHIDEKAFENVTDL HNLLENSKIKGRVFSK K A F S K I 1 0 3 2 0 1 2 0 1 1 5 1 0 1 0 1 1 1 0 1 0 0 22 0 2611.3282 P51884;CON__Q05443 P51884 85 106 LUM Lumican yes no 3 2.2441E-32 106.57 By MS/MS By MS/MS 1 1 8121400 0 4556100 3565300 79 1280 86 338;339 255;256;257 256 77;78 3 AFGPGLQGGSAGSPAR PTKPSKVKAFGPGLQG GSAGSPARFTIDTKGA K A F A R F 3 1 0 0 0 1 0 5 0 0 1 0 0 1 2 2 0 0 0 0 0 0 16 0 1428.711 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 1072 1087 FLNA Filamin-A yes no 2 0.0093144 49.188 By matching By MS/MS By matching 1 1 1 6274700 1968900 2367100 1938600 80 1182 87 340;341;342 258 258 1532 1 AFGSGIDIKPGTPPIAGR KMSEMELKAFGSGIDI GTPPIAGRSTTPTSSP K A F G R S 2 1 0 1 0 0 0 4 0 3 0 1 0 1 3 1 1 0 0 0 0 0 18 1 1752.9523 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2664 2681 PRRC2C Protein PRRC2C yes no 3 0.0058154 65.598 By MS/MS By matching By MS/MS 1 1 1 7116300 3166500 1876600 2073200 81 526 88 343;344;345 259;260 259 671;3057 2 AFLAELEQNSPK KAQAESNKAFLAELEQ ELEQNSPKIQKVKEAL K A F P K I 2 0 1 0 0 1 2 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 12 0 1345.6878 H0Y390;H3BPE1;H3BQK9;Q9UPN3 H0Y390 1558 1569 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 0.0091928 58.098 By matching By matching By MS/MS 1 1 1 2044400 667360 693970 683080 82 746 89 346;347;348 261 261 1020 1 AFLEVNEEGSEAAASTAVVIAGR YVSDAFHKAFLEVNEE TAVVIAGRSLNPNRVT K A F G R S 6 1 1 0 0 0 4 2 0 1 1 0 0 1 0 2 1 0 0 3 0 0 23 0 2290.1441 Q8TCE1;P01008 Q8TCE1 198 220 SERPINC1 Antithrombin-III yes no 3 0.0082756 39.935 By matching By matching By MS/MS 1 1 1 2873600 1200500 783840 889240 83 1084 90 349;350;351 262 262 1 AFSEDEALAQQENR PMPGPVVRAFSEDEAL ALAQQENRHWRRGTFE R A F N R H 3 1 1 1 0 2 3 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 14 0 1606.7223 Q9C0H5 Q9C0H5 602 615 ARHGAP39 Rho GTPase-activating protein 39 yes yes 2 0.0080575 54.524 By MS/MS By matching 1 1 1272100 0 715530 556620 84 1805 91 352;353 263 263 2520 1 AFSEGQITR SRKKTVRRAFSEGQIT FSEGQITRRMNPTRSA R A F T R R 1 1 0 0 0 1 1 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 9 0 1007.5036 Q96GN5 Q96GN5 259 267 CDCA7L Cell division cycle-associated 7-like protein yes yes 2 0.013038 65.278 By matching By MS/MS By matching 1 1 1 1739800 602190 608700 528900 85 1736 92 354;355;356 264 264 2386 1 AFSTVPLTPVPR ILQSSDSRAFSTVPLT VPLTPVPRPSDSVSST R A F P R P 1 1 0 0 0 0 0 0 0 0 1 0 0 1 3 1 2 0 0 2 0 0 12 0 1283.7238 H0Y5D5;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3 H0Y5D5 482 493 CIZ1 Cip1-interacting zinc finger protein yes no 2 0.0016665 82.85 By MS/MS By MS/MS By MS/MS 1 1 1 1874900 751020 527500 596420 86 649 93 357;358;359 265;266;267 265 873;3115;3116 3 AFTTKSGLNVHQR YKCSDCGKAFTTKSGL SGLNVHQRKHTGERPY K A F Q R K 1 1 1 0 0 1 0 1 1 0 1 1 0 1 0 1 2 0 0 1 0 0 13 1 1457.7739 H9KV89;A0A087X254;Q8N8J6 H9KV89 693 705 ZNF615 Zinc finger protein 615 yes no 3 0.013396 43.382 By matching By matching By MS/MS 1 1 1 2504900 809420 943290 752190 87 111 94 360;361;362 268 268 144;2903 1 AFVAIGDYNGHVGLGVK YLFSLPIKAFVAIGDY GHVGLGVKCSKEVATA K A F V K C 2 0 1 1 0 0 0 4 1 1 1 1 0 1 0 0 0 0 1 3 0 0 17 0 1715.8995 H0YEN5;P15880;E9PPT0;E9PMM9;I3L404;E9PM36 H0YEN5 28 44 RPS2 40S ribosomal protein S2 yes no 3 2.5061E-11 95.264 By MS/MS 1 368470 368470 0 0 88 790 95 363 269 269 1 AFVEDSEDEDGAGEGGSSLLQK KQLKESFRAFVEDSED GGSSLLQKRAKTRQEK R A F Q K R 2 0 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 22 0 2238.9764 H0YFD2;F8WFC1;Q8N9T8 H0YFD2 110 131 KRI1 Protein KRI1 homolog yes no 2;3 5.0512E-40 112.72 By MS/MS By MS/MS By MS/MS 1 2 2 50824000 15110000 18827000 16887000 89 704 96 364;365;366;367;368 270;271;272;273 273 946 4 AFVEDSEDEDGAGEGGSSLLQKR KQLKESFRAFVEDSED GSSLLQKRAKTRQEKA R A F K R A 2 1 0 3 0 1 4 4 0 0 2 1 0 1 0 3 0 0 0 1 0 0 23 1 2395.0775 H0YFD2;F8WFC1;Q8N9T8 H0YFD2 110 132 KRI1 Protein KRI1 homolog yes no 3 0.00098621 69.986 By MS/MS By MS/MS By matching 1 1 1 26156000 9515300 8575800 8064500 90 704 97 369;370;371 274;275;276 276 946 3 AGAGMITQHSSNASPINR TRRMGDGRAGAGMITQ SNASPINRIVQISGNS R A G N R I 3 1 2 0 0 1 0 2 1 2 0 0 1 0 1 3 1 0 0 0 0 0 18 0 1810.8744 Q9NWH9;H0YKH2;H7C3F4 Q9NWH9 989 1006 SLTM SAFB-like transcription modulator yes no 3 0.0010268 62.167 By MS/MS By MS/MS 1 1 2683600 1416200 0 1267400 91 1868 98 372;373 277;278 277 2635 2 AGASIPSSGAASPR LGPGSPVRAGASIPSS SSGAASPRGFPLGLSA R A G P R G 4 1 0 0 0 0 0 2 0 1 0 0 0 0 2 4 0 0 0 0 0 0 14 0 1227.6208 Q9P270 Q9P270 52 65 SLAIN2 SLAIN motif-containing protein 2 yes yes 2 0.012343 50.102 By matching By MS/MS 1 1 1284500 626990 657500 0 92 1891 99 374;375 279 279 2667 1 AGDDYEVLELDDVPK RHERSLGRAGDDYEVL LELDDVPKENSSGSSP R A G P K E 1 0 0 4 0 0 2 1 0 0 2 1 0 0 1 0 0 0 1 2 0 0 15 0 1676.7781 O43164 O43164 59 73 PJA2 E3 ubiquitin-protein ligase Praja-2 yes yes 2 0.003389 62.088 By MS/MS By matching By MS/MS 1 1 1 3013600 968240 909700 1135700 93 1000 100 376;377;378 280;281 281 3749 2 AGDLLEDSPK EKGALKRRAGDLLEDS DLLEDSPKRPKEAENP R A G P K R 1 0 0 2 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 0 1043.5135 P51858 P51858 158 167 HDGF Hepatoma-derived growth factor yes yes 2 0.00053749 107.53 By MS/MS By MS/MS By MS/MS 1 1 1 22703000 6474600 8277100 7951100 94 1279 101 379;380;381 282;283;284 284 1685 3 AGDLLEDSPKRPK EKGALKRRAGDLLEDS EDSPKRPKEAENPEGE R A G P K E 1 1 0 2 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 0 0 0 13 2 1424.7623 P51858 P51858 158 170 HDGF Hepatoma-derived growth factor yes yes 2;3 5.4395E-59 162.88 By MS/MS By MS/MS By MS/MS 2 2 2 219910000 79738000 76939000 63235000 95 1279 102 382;383;384;385;386;387 285;286;287;288;289 285 1685 5 AGDPGEMPQSPTGLGQPK AGLAPKRRAGDPGEMP PTGLGQPKRRGRPPSK R A G P K R 1 0 0 1 0 2 1 4 0 0 1 1 1 0 4 1 1 0 0 0 0 0 18 0 1765.8305 A0A0C4DGI9;J3KPG5;F8VU39;Q9UIF9;H0YHL2 A0A0C4DGI9 324 341 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2;3 2.6158E-11 95.873 By matching By MS/MS By MS/MS 1 1 2 18308000 5120600 6438800 6748300 96 201 103 388;389;390;391 290;291 290 280;2936 1 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR NDVTEGQRAGEPNSPD PAGVHPPR________ R A G P R - 5 1 2 3 1 0 3 3 1 0 0 0 0 0 6 2 1 0 0 2 0 0 30 0 3013.3108 Q08J23 Q08J23 738 767 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes yes 3 0.0045953 42.03 By MS/MS By MS/MS By matching 1 2 1 21387000 3809100 10950000 6628000 97 1358 104 392;393;394;395 292;293 292 1782;1783 2 AGFAGDDAPR DNGSGMCKAGFAGDDA FAGDDAPRAVFPSIVG K A G P R A 3 1 0 2 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 10 0 975.44101 P63261;P60709;P68133;P68032;I3L3I0;I3L1U9;A6NL76;P63267;P62736;Q6S8J3;C9JUM1;C9JZR7;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8;A5A3E0;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;P0CG39;P0CG38;F8WCH0 P63261 19 28 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2;POTEE;POTEF;POTEJ;POTEI Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member J;POTE ankyrin domain family member I yes no 2 0.0045145 80.455 By MS/MS By MS/MS By matching 1 1 1 14343000 5493300 6337300 2512000 98 1305 105 396;397;398 294;295 294 2 AGFSWIEVTFK TGQYEREKAGFSWIEV SWIEVTFKNPLVWVHA K A G F K N 1 0 0 0 0 0 1 1 0 1 0 1 0 2 0 1 1 1 0 1 0 0 11 0 1283.655 H7C0L5;B7ZKJ8;Q14624 H7C0L5 567 577 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 2.25E-05 122.94 By MS/MS By MS/MS 1 1 4862200 0 2231300 2630800 99 382 106 399;400 296;297 296 2 AGGASPAASSTAQPPTQHR GGGGGPVRAGGASPAA AQPPTQHRLVARNGEA R A G H R L 5 1 0 0 0 2 0 2 1 0 0 0 0 0 3 3 2 0 0 0 0 0 19 0 1790.866 Q8IU81 Q8IU81 449 467 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 3 0.0037198 51.029 By matching By MS/MS By matching 1 1 1 7155300 2536400 2083300 2535600 100 1606 107 401;402;403 298 298 2201 1 AGGGGGLGAGSPALSGGQGR PGAALQRRAGGGGGLG ALSGGQGRRRKQPPRP R A G G R R 3 1 0 0 0 1 0 10 0 0 2 0 0 0 1 2 0 0 0 0 0 0 20 0 1582.7812 Q6IQ22 Q6IQ22 11 30 RAB12 Ras-related protein Rab-12 yes yes 2 0.0029283 60.618 By matching By MS/MS By matching 1 1 1 3919100 1410800 1350100 1158200 101 1537 108 404;405;406 299 299 2090 1 AGGNTSEGREYSR AINHQRVRAGGNTSEG SEGREYSRSVIHSLVA R A G S R S 1 2 1 0 0 0 2 3 0 0 0 0 0 0 0 2 1 0 1 0 0 0 13 1 1382.6175 Q9GZU2 Q9GZU2 820 832 PEG3 Paternally-expressed gene 3 protein yes yes 3 0.003619 66.267 By MS/MS By matching By matching 1 1 1 979200 349130 253100 376970 102 1808 109 407;408;409 300 300 104 3911 0 AGGPATPLSPTR MATPLPGRAGGPATPL ATPLSPTRLSRLQEKE R A G T R L 2 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 2 0 0 0 0 0 12 0 1123.5986 Q03252 Q03252 29 40 LMNB2 Lamin-B2 yes yes 2 0.010034 56.569 By MS/MS By matching By MS/MS 1 1 1 20229000 7013900 7818000 5397500 103 1340 110 410;411;412 301;302 302 1757 2 AGGPTTPLSPTR VPPRMGSRAGGPTTPL TTPLSPTRLSRLQEKE R A G T R L 1 1 0 0 0 0 0 2 0 0 1 0 0 0 3 1 3 0 0 0 0 0 12 0 1153.6091 P20700;A0A0D9SFY5;A0A0D9SFE5;E9PBF6 P20700 15 26 LMNB1 Lamin-B1 yes no 2 0.018774 65.895 By matching By MS/MS By matching 1 1 1 9422800 3317600 3429000 2676300 104 1180 111 413;414;415 303 303 1528;3300 1 AGGPTTPLSPTRLSR VPPRMGSRAGGPTTPL LSPTRLSRLQEKEELR R A G S R L 1 2 0 0 0 0 0 2 0 0 2 0 0 0 3 2 3 0 0 0 0 0 15 1 1509.8263 P20700;A0A0D9SFY5;A0A0D9SFE5;E9PBF6 P20700 15 29 LMNB1 Lamin-B1 yes no 2 0.0073315 53.168 By MS/MS By matching By matching 1 1 1 3534600 1084600 1109100 1340900 105 1180 112 416;417;418 304 304 1528;3300 1 AGGSAALSPSK GMAKKVTKAGGSAALS SAALSPSKKRKNSKKK K A G S K K 3 0 0 0 0 0 0 2 0 0 1 1 0 0 1 3 0 0 0 0 0 0 11 0 944.49271 Q92522 Q92522 24 34 H1FX Histone H1x yes yes 2 5.5769E-11 142.39 By MS/MS By MS/MS By MS/MS 2 1 1 19653000 9433000 5620300 4599700 106 1693 113 419;420;421;422 305;306;307;308;309;310;311;312;313;314;315 312 2320;2321 11 AGGSAALSPSKK GMAKKVTKAGGSAALS AALSPSKKRKNSKKKN K A G K K R 3 0 0 0 0 0 0 2 0 0 1 2 0 0 1 3 0 0 0 0 0 0 12 1 1072.5877 Q92522 Q92522 24 35 H1FX Histone H1x yes yes 2 3.1965E-38 154.13 By MS/MS By MS/MS By MS/MS 1 1 1 12896000 4441600 5079500 3375400 107 1693 114 423;424;425 316;317;318;319;320;321;322;323 323 2320;2321 8 AGIEIFVVVVGR KAVQEAQRAGIEIFVV IFVVVVGRQVNEPHIR R A G G R Q 1 1 0 0 0 0 1 2 0 2 0 0 0 1 0 0 0 0 0 4 0 0 12 0 1257.7445 A0A087X0S5;P12109 A0A087X0S5 963 974 COL6A1 Collagen alpha-1(VI) chain yes no 2 1.4796E-154 169.41 By MS/MS By MS/MS By MS/MS 5 2 2 11245000 4439000 3729200 3076900 108 101 115 426;427;428;429;430;431;432;433;434 324;325;326;327;328;329;330 324 7 AGLESGAEPGDGDSDTTK SKKDKKAKAGLESGAE DGDSDTTKKKKKKKKA K A G T K K 2 0 0 3 0 0 2 4 0 0 1 1 0 0 1 2 2 0 0 0 0 0 18 0 1705.7279 O60832 O60832 481 498 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 6.8228E-199 195.17 By matching By MS/MS By MS/MS 2 2 2 27036000 8250900 10866000 7918700 109 1028 116 435;436;437;438;439;440 331;332 332 1375;1376;3249;3250 2 AGLESGAEPGDGDSDTTKK SKKDKKAKAGLESGAE GDSDTTKKKKKKKKAK K A G K K K 2 0 0 3 0 0 2 4 0 0 1 2 0 0 1 2 2 0 0 0 0 0 19 1 1833.8228 O60832 O60832 481 499 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2;3 0.0027675 70.783 By MS/MS By MS/MS By MS/MS 2 1 1 10419000 5866800 2606300 1946400 110 1028 117 441;442;443;444 333;334;335;336 336 1375;1376;3249;3250 4 AGLESGAEPGDGDSDTTKKK SKKDKKAKAGLESGAE DSDTTKKKKKKKKAKE K A G K K K 2 0 0 3 0 0 2 4 0 0 1 3 0 0 1 2 2 0 0 0 0 0 20 2 1961.9178 O60832 O60832 481 500 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 0.00086279 75.611 By MS/MS By MS/MS 1 1 8539200 4499300 4040000 0 111 1028 118 445;446 337;338 338 1375;1376;3249;3250 2 AGLGSPERPPK GSPPSVQRAGLGSPER GSPERPPKTSPGSPRL R A G P K T 1 1 0 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 1 1107.6037 Q9H6F5;H0YG79 Q9H6F5 54 64 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 0.00013548 108.32 By MS/MS By MS/MS By MS/MS 2 2 2 29913000 11923000 10702000 7288600 112 1825 119 447;448;449;450;451;452 339;340;341;342;343 339 2557 5 AGLGSPERPPKTSPGSPR GSPPSVQRAGLGSPER KTSPGSPRLQQGAGLE R A G P R L 1 2 0 0 0 0 1 3 0 0 1 1 0 0 5 3 1 0 0 0 0 0 18 2 1789.9435 Q9H6F5;H0YG79 Q9H6F5 54 71 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 0.0032404 48.423 By MS/MS By matching By matching 1 1 1 9324700 2534700 3777800 3012200 113 1825 120 453;454;455 344 344 2557;2558;3503 1 AGLQFPVGR KAKTRSSRAGLQFPVG GLQFPVGRVHRLLRKG R A G G R V 1 1 0 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 0 9 0 943.52395 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;C9J0D1;Q71UI9;P0C0S5;Q93077;Q8IUE6;Q7L7L0;P04908;Q96QV6;P16104 A0A0U1RR32 22 30 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG;H2AFV;H2AFZ;HIST1H2AC;HIST2H2AB;HIST3H2A;HIST1H2AB;HIST1H2AA;H2AFX Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A;Histone H2A.V;Histone H2A.Z;Histone H2A type 1-C;Histone H2A type 2-B;Histone H2A type 3;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2AX yes no 2 0.0041983 111.65 By MS/MS By MS/MS By matching 1 1 1 15195000 3005300 11251000 938950 114 258 121 456;457;458 345;346 345 2 AGMSNRQKNK ELIDSEFRAGMSNRQK MSNRQKNKAKRMAKLF R A G N K A 1 1 2 0 0 1 0 1 0 0 0 2 1 0 0 1 0 0 0 0 0 0 10 2 1132.5771 A0A0A0MTH9;O14981 A0A0A0MTH9 202 211 BTAF1 TATA-binding protein-associated factor 172 yes no 2 0.017901 44.299 By MS/MS 1 0 0 0 0 115 166 122 459 347 347 227 1 AGNLGGGVVTIER ERIKVNGKAGNLGGGV GGVVTIERSKSKITVT K A G E R S 1 1 1 0 0 0 1 4 0 1 1 0 0 0 0 0 1 0 0 2 0 0 13 0 1241.6728 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;P35268 K7EJT5 20 32 RPL22 60S ribosomal protein L22 yes no 2 0.018714 54.343 By matching By MS/MS 1 1 1490800 294220 1196600 0 116 935 123 460;461 348 348 1 AGPITGLRDRLNQF QPLNLALRAGPITGLR LRDRLNQF________ R A G Q F - 1 2 1 1 0 1 0 2 0 1 2 0 0 1 1 0 1 0 0 0 0 0 14 2 1556.8423 Q8IWZ4 Q8IWZ4 195 208 TRIM48 Tripartite motif-containing protein 48 yes yes 2 0.014027 41.54 By matching By matching By MS/MS 1 1 1 3153200 1091100 1071000 991080 117 1614 124 462;463;464 349 349 3451 0 AGQLHTRVSR LPVSETLKAGQLHTRV QLHTRVSRCQVCMKSL K A G S R C 1 2 0 0 0 1 0 1 1 0 1 0 0 0 0 1 1 0 0 1 0 0 10 1 1123.621 F5H3Q5;A0A087WZY5;F5H851;A8MXH5;Q14031 F5H3Q5 1616 1625 COL4A6 Collagen alpha-6(IV) chain yes no 2 0.012231 65.278 By MS/MS 1 0 0 0 0 118 90 125 465 350 350 2892 1 AGSCCLSPGGR LVKEEGPRAGSCCLSP CCLSPGGRAELEGRDK R A G G R A 1 1 0 0 2 0 0 3 0 0 1 0 0 0 1 2 0 0 0 0 0 0 11 0 1120.4754 E7ER32;A0A087X287;B0QY83;A0A087WU73;W0Z7M9;Q969V6 E7ER32 505 515 MKL1;mkl1 MKL/myocardin-like protein 1 yes no 2 0.002392 76.357 By MS/MS By matching By matching 1 1 1 2224300 633360 796970 793920 119 36 126 466;467;468 351 351 38 1 AGSISTLDSLDFAR SGGGQLNRAGSISTLD LDSLDFARYSDDGNRE R A G A R Y 2 1 0 2 0 0 0 1 0 1 2 0 0 1 0 3 1 0 0 0 0 0 14 0 1451.7256 A0A075B785;Q9P260 A0A075B785 178 191 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 2 0.013841 49.298 By MS/MS By MS/MS By MS/MS 1 1 1 1805100 729400 593120 482550 120 14 127 469;470;471 352;353;354 353 14 3 AGSSGNSCITYQPSVSGEHK SGSSFSRRAGSSGNSC PSVSGEHKAQVTTKAE R A G H K A 1 0 1 0 1 1 1 3 1 1 0 1 0 0 1 5 1 0 1 1 0 0 20 0 2064.9171 A6PW57;Q99755 A6PW57 461 480 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha yes no 3 0.0050232 47.796 By MS/MS By matching By matching 1 1 1 2325500 754690 857260 713570 121 313 128 472;473;474 355 355 414 1 AGSSTPGDAPPAVAEVQGR AGSSEQPRAGSSTPGD AVAEVQGRSDGSGESA R A G G R S 4 1 0 1 0 1 1 3 0 0 0 0 0 0 3 2 1 0 0 2 0 0 19 0 1765.8595 Q7Z6Z7 Q7Z6Z7 2885 2903 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 3 0.015297 48.371 By matching By MS/MS 1 1 1175300 0 629680 545570 122 1587 129 475;476 356 356 2164 0 AGTDSPVSCASVTEER SESENEPKAGTDSPVS CASVTEERVASDSPKP K A G E R V 2 1 0 1 1 0 2 1 0 0 0 0 0 0 1 3 2 0 0 2 0 0 16 0 1664.7312 E9PEI0;Q69YH5 E9PEI0 691 706 CDCA2 Cell division cycle-associated protein 2 yes no 2 0.01153 47.712 By MS/MS By matching By matching 1 1 1 2580800 758300 1181200 641250 123 567 130 477;478;479 357 357 752 1 AGVVNGTGAPGQSPGAGR QISVNNVKAGVVNGTG GQSPGAGRACESCYTT K A G G R A 3 1 1 0 0 1 0 6 0 0 0 0 0 0 2 1 1 0 0 2 0 0 18 0 1551.7754 H0Y4T7;E7ESY4;Q13330 H0Y4T7 166 183 MTA1 Metastasis-associated protein MTA1 yes no 2 0.012378 47.09 By matching By MS/MS By matching 1 1 1 2407000 916200 797580 693180 124 541 131 480;481;482 358 358 696 1 AHFNAMFQPSSPTR HRMQLESRAHFNAMFQ FQPSSPTRRPGFSPTS R A H T R R 2 1 1 0 0 1 0 0 1 0 0 0 1 2 2 2 1 0 0 0 0 0 14 0 1589.7409 H0Y4Q6;Q8WUA4 H0Y4Q6 392 405 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2;3 4.08E-06 103.66 By MS/MS By MS/MS By MS/MS 4 4 4 19372000 8860100 4806800 5705200 125 752 132;133 483;484;485;486;487;488;489;490;491;492;493;494 359;360;361;362;363;364;365 364 55 1027;1028;3161 6 AHLSENELEALEK QNLEIHRRAHLSENEL NELEALEKNDMEQMKY R A H E K N 2 0 1 0 0 0 4 0 1 0 3 1 0 0 0 1 0 0 0 0 0 0 13 0 1481.7362 A0A0A0MR66;P98175 A0A0A0MR66 859 871 RBM10 RNA-binding protein 10 yes no 2 0.01176 53.136 By matching By matching By MS/MS 1 1 1 955770 313200 303790 338780 126 128 134 495;496;497 366 366 170 1 AIAGVSGFGYDHLILNVEWAK HRREDAARAIAGVSGF ILNVEWAKPSTN____ R A I A K P 3 0 1 1 0 0 1 3 1 2 2 1 0 1 0 1 0 1 1 2 0 0 21 0 2259.1688 O75821;K7EP16 O75821 296 316 EIF3G Eukaryotic translation initiation factor 3 subunit G yes no 3 0.013955 37.237 By MS/MS 1 2000800 2000800 0 0 127 1041 135 498 367 367 1 AIEPQKEEADENYNSVNTR REIRLQLKAIEPQKEE NYNSVNTRMR______ K A I T R M 2 1 3 1 0 1 4 0 0 1 0 1 0 0 1 1 1 0 1 1 0 0 19 1 2206.0138 C9JFM5;Q12846 C9JFM5 155 173 STX4 Syntaxin-4 yes no 3 0.0017159 67.644 By MS/MS By MS/MS By matching 1 1 1 6640500 2419600 2781400 1439500 128 432 136 499;500;501 368;369 369 569 2 AIGNNSATSPR HHHPPKSRAIGNNSAT NNSATSPRVVVTQPNT R A I P R V 2 1 2 0 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 0 0 0 11 0 1086.5418 A0A1B0GV57;Q9NYJ8 A0A1B0GV57 158 168 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 yes no 2 0.00069307 94.402 By matching By MS/MS By matching 1 1 1 2546900 877900 934500 734480 129 280 137 502;503;504 370 370 372 1 AIGSTSKPQESPK SSASPVSRAIGSTSKP SKPQESPKGKRKLDLN R A I P K G 1 0 0 0 0 1 1 1 0 1 0 2 0 0 2 3 1 0 0 0 0 0 13 1 1328.6936 F5H8D7;P18887;M0QYS5 F5H8D7 200 212 XRCC1 DNA repair protein XRCC1 yes no 2;3 2.5262E-13 130.47 By MS/MS By MS/MS By MS/MS 3 2 1 13877000 6608800 4544300 2723400 130 660 138 505;506;507;508;509;510 371;372;373;374 371 885 4 AILVDLEPGTMDSVR TGGKYVPRAILVDLEP PGTMDSVRSGPFGQIF R A I V R S 1 1 0 2 0 0 1 1 0 1 2 0 1 0 1 1 1 0 0 2 0 0 15 0 1614.8287 Q5JP53;P07437;Q9BVA1;Q13885;A0A0B4J269;Q13509;G3V5W4;G3V2R8;G3V3R4;G3V2N6 Q5JP53 45 59 TUBB;TUBB2B;TUBB2A;TUBB3 Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain yes no 2 0.0039728 66.595 By MS/MS By matching By MS/MS 1 1 1 1598400 594610 614740 389030 131 1118 139 511;512;513 375;376;377 377 3 AISAPTSPTR AVKRMYDRAISAPTSP SAPTSPTRLSHSGKRS R A I T R L 2 1 0 0 0 0 0 0 0 1 0 0 0 0 2 2 2 0 0 0 0 0 10 0 999.53491 B0QY95;Q9NQG6 B0QY95 53 62 MIEF1 Mitochondrial dynamics protein MID51 yes no 2 8.9152E-05 113.61 By MS/MS By MS/MS By MS/MS 1 1 1 8696500 3284400 2970100 2442100 132 323 140 514;515;516 378;379;380 380 452;2987 3 AISTGSLASSTLNK VRGFNMGRAISTGSLA LASSTLNKLAVRPLSV R A I N K L 2 0 1 0 0 0 0 1 0 1 2 1 0 0 0 4 2 0 0 0 0 0 14 0 1348.7198 Q12923 Q12923 906 919 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 1.1421E-13 127.3 By MS/MS By MS/MS By MS/MS 1 1 1 5165100 1923000 1675800 1566300 133 1369 141 517;518;519 381;382;383 381 1809 3 AISTPETPLTK PSKGSQKRAISTPETP TPETPLTKRSVSTRSP R A I T K R 1 0 0 0 0 0 1 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 11 0 1156.634 E9PIQ6;Q14181 E9PIQ6 84 94 POLA2 DNA polymerase alpha subunit B yes no 2 0.0036641 90.653 By matching By MS/MS By MS/MS 1 2 1 2978900 1080100 1506600 392230 134 588 142;143 520;521;522;523 384;385 384 779;3093;3094;3095 2 AISTPETPLTKR PSKGSQKRAISTPETP PETPLTKRSVSTRSPH R A I K R S 1 1 0 0 0 0 1 0 0 1 1 1 0 0 2 1 3 0 0 0 0 0 12 1 1312.7351 E9PIQ6;Q14181 E9PIQ6 84 95 POLA2 DNA polymerase alpha subunit B yes no 2 0.016058 47.606 By MS/MS By MS/MS 1 1 1978700 1064700 0 914080 135 588 144 524;525 386;387 387 779;3093;3094;3095 0 AITPPHPASQANIIFDITEGNLR PEEIIFLRAITPPHPA DITEGNLRDSFDIIKR R A I L R D 3 1 2 1 0 1 1 1 1 4 1 0 0 1 3 1 2 0 0 0 0 0 23 0 2474.2918 P23142 P23142 620 642 FBLN1 Fibulin-1 yes yes 3 0.00065762 55.127 By matching By matching By MS/MS 1 1 1 3349100 1608000 816160 924950 136 1189 145 526;527;528 388 388 1 AITSLLGGGSPK ASTNARNKAITSLLGG LLGGGSPKNNTAAETE K A I P K N 1 0 0 0 0 0 0 3 0 1 2 1 0 0 1 2 1 0 0 0 0 0 12 0 1099.6237 Q6KC79 Q6KC79 2649 2660 NIPBL Nipped-B-like protein yes yes 2 0.0064037 65.495 By matching By MS/MS By MS/MS 1 1 1 15936000 4948100 6237600 4750400 137 1539 146 529;530;531 389;390 390 2093 2 AIVAIENPADVSVISSR EKLLLAARAIVAIENP DVSVISSRNTGQRAVL R A I S R N 3 1 1 1 0 0 1 0 0 3 0 0 0 0 1 3 0 0 0 3 0 0 17 0 1739.9418 F8WD59;C9J9K3;A0A0C4DG17;P08865 F8WD59 64 80 RPSA 40S ribosomal protein SA yes no 2 0.0031631 61.038 By matching By MS/MS 1 1 1319600 592870 726720 0 138 186 147 532;533 391 391 1 AIYSSFKDDVDLK STATRVMKAIYSSFKD FKDDVDLKQDLRCDTI K A I L K Q 1 0 0 3 0 0 0 0 0 1 1 2 0 1 0 2 0 0 1 1 0 0 13 1 1499.7508 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 384 396 KIRREL Kin of IRRE-like protein 1 yes no 2 0.0068185 61.213 By matching By MS/MS By MS/MS 1 1 2 2824000 598500 792450 1433000 139 344 148 534;535;536;537 392;393 392 3628 2 AKEVELVSE KKKKKKKKAKEVELVS KEVELVSE________ K A K S E - 1 0 0 0 0 0 3 0 0 0 1 1 0 0 0 1 0 0 0 2 0 0 9 1 1002.5233 O60832 O60832 506 514 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 0.0059137 91.469 By MS/MS By matching By matching 1 1 1 10106000 3257300 3559200 3289800 140 1028 149 538;539;540 394 394 1377 1 AKGPSPPGAK GSHRAGERAKGPSPPG GPSPPGAKRRRLSESS R A K A K R 2 0 0 0 0 0 0 2 0 0 0 2 0 0 3 1 0 0 0 0 0 0 10 1 908.50797 Q96S55 Q96S55 61 70 WRNIP1 ATPase WRNIP1 yes yes 2 0.0028735 85.29 By MS/MS By MS/MS By matching 1 1 1 5541200 1911200 1968700 1661300 141 1758 150 541;542;543 395;396 396 2429 2 AKLSAPLAGMGNAK ASEDGRVRAKLSAPLA LAGMGNAKADSRGRSR R A K A K A 4 0 1 0 0 0 0 2 0 0 2 2 1 0 1 1 0 0 0 0 0 0 14 1 1327.7282 E3W994;J3KR49;E7ERI8;E7EW49;O75122;A0A0U1RQI6 E3W994 427 440 CLASP2 CLIP-associating protein 2 yes no 2 0.0021225 78.505 By MS/MS By MS/MS By matching 1 1 1 5972300 1859300 1920500 2192400 142 501 151 544;545;546 397;398;399 397 641 3 AKNVQLSTGR LLLQKLLRAKNVQLST NVQLSTGRGSEGLRAE R A K G R G 1 1 1 0 0 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 10 1 1072.5989 O14686 O14686 4469 4478 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.0069715 75.043 By MS/MS 1 497550000 0 497550000 0 143 983 152 547 400 400 1311 1 AKPAMPQDSVPSPR DEVAPAKKAKPAMPQD QDSVPSPRSLQGKSTT K A K P R S 2 1 0 1 0 1 0 0 0 0 0 1 1 0 4 2 0 0 0 1 0 0 14 1 1479.7504 P53396 P53396 470 483 ACLY ATP-citrate synthase yes yes 2;3 1.3963E-12 117.2 By MS/MS By MS/MS By MS/MS 3 3 3 21327000 7711900 7232700 6382800 144 1289 153;154 548;549;550;551;552;553;554;555;556 401;402;403;404;405;406;407;408;409;410;411 409 126 1699;1700 9 AKPPADPAAAASPCR DAAKGKVKAKPPADPA AAAASPCRAAAGGQGS K A K C R A 6 1 0 1 1 0 0 0 0 0 0 1 0 0 4 1 0 0 0 0 0 0 15 1 1478.73 Q9GZT9 Q9GZT9 114 128 EGLN1 Egl nine homolog 1 yes yes 2 0.0017227 75.316 By matching By MS/MS By MS/MS 1 1 1 6819900 2283200 2339500 2197200 145 1807 155 557;558;559 412;413 412 2522 2 AKSEDSDVELSD EVHEELAKAKSEDSDV DSDVELSD________ K A K S D - 1 0 0 3 0 0 2 0 0 0 1 1 0 0 0 3 0 0 0 1 0 0 12 1 1293.5572 Q5VZL5;H7C1I7 Q5VZL5 1537 1548 ZMYM4 Zinc finger MYM-type protein 4 yes no 2 0.014939 55.335 By MS/MS 1 0 0 0 0 146 1525 156 560 414 414 2073;2074 1 AKTPVTLK KREPLKGRAKTPVTLK AKTPVTLKQRRVEHNQ R A K L K Q 1 0 0 0 0 0 0 0 0 0 1 2 0 0 1 0 2 0 0 1 0 0 8 1 856.5382 G5E972;P42167;H0YJH7 G5E972 206 213 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 2 0.00013099 141.89 By MS/MS By MS/MS 1 1 39299000 21232000 0 18067000 147 734 157 561;562 415;416 416 3153 2 AKTPVTLKQR KREPLKGRAKTPVTLK TPVTLKQRRVEHNQVE R A K Q R R 1 1 0 0 0 1 0 0 0 0 1 2 0 0 1 0 2 0 0 1 0 0 10 2 1140.6979 G5E972;P42167;H0YJH7 G5E972 206 215 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3 0.0069291 71.976 By matching By MS/MS By MS/MS 1 1 1 1415800 177710 640230 597870 148 734 158 563;564;565 417;418 418 3153 1 AKTQTPPVSPAPQPTEER RKLEEQARAKTQTPPV APQPTEERLPSSPVYE R A K E R L 2 1 0 0 0 2 2 0 0 0 0 1 0 0 5 1 3 0 0 1 0 0 18 1 1932.9905 Q14247;H0YEV2;H0YCD9 Q14247 397 414 CTTN Src substrate cortactin yes no 3 0.0037077 51.475 By MS/MS By MS/MS By MS/MS 1 1 1 15645000 3843100 6066200 5735300 149 1408 159 566;567;568 419;420;421 420 1876;3371 3 AKVPAQANGTPTTK RKKRNRTKAKVPAQAN ANGTPTTKSPAPGAPT K A K T K S 3 0 1 0 0 1 0 1 0 0 0 2 0 0 2 0 3 0 0 1 0 0 14 1 1382.7518 I3L1L3;Q9BQG0 I3L1L3 1138 1151 MYBBP1A Myb-binding protein 1A yes no 2 0.0051971 72.289 By MS/MS 1 331890 331890 0 0 150 885 160 569 422 422 3200 1 AKYVKTHQVIAR VERLEADKAKYVKTHQ KTHQVIARRQEPALRG K A K A R R 2 1 0 0 0 1 0 0 1 1 0 2 0 0 0 0 1 0 1 2 0 0 12 2 1412.8252 Q8TAY7 Q8TAY7 26 37 FAM110D Protein FAM110D yes yes 2 0.010424 43.991 By MS/MS 1 208220 0 0 208220 151 1666 161 570 423 423 3467;3880 1 ALAAAGYDVEK VSLAALKKALAAAGYD AAGYDVEKNNSRIKLG K A L E K N 4 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 0 11 0 1106.5608 P10412;P16403;P16402;P22492;Q02539 P10412 65 75 HIST1H1E;HIST1H1C;HIST1H1D;HIST1H1T;HIST1H1A Histone H1.4;Histone H1.2;Histone H1.3;Histone H1t;Histone H1.1 yes no 2 0.0038642 79.148 By MS/MS By MS/MS By MS/MS 1 1 1 11102000 2344100 7720900 1036500 152 1137 162 571;572;573 424;425;426 425 3 ALALGALQNIR KLNTYNDKALALGALQ LGALQNIRYRGGNTRT K A L I R Y 3 1 1 0 0 1 0 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1138.6822 D6RGG3;Q99715;A0A087X0A8;H0Y5N9 D6RGG3 2385 2395 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0097745 68.224 By MS/MS 1 700400 700400 0 0 153 497 163 574 427 427 1 ALANSLACQGK AQEEYVKRALANSLAC NSLACQGKYTPSGQAG R A L G K Y 3 0 1 0 1 1 0 1 0 0 2 1 0 0 0 1 0 0 0 0 0 0 11 0 1131.5706 J3KPS3;P04075;H3BR68 J3KPS3 336 346 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.012276 64.04 By matching By MS/MS 1 1 1546600 336070 1210500 0 154 908 164 575;576 428 428 1 ALDIDSDEESEPK LYQNYKEKALDIDSDE SDEESEPKEQKSDEKI K A L P K E 1 0 0 3 0 0 3 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 13 0 1446.6362 Q96DR7 Q96DR7 387 399 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 2 0.0071236 60.401 By MS/MS By matching By MS/MS 1 1 1 2624400 631630 1076900 915820 155 1729 165 577;578;579 429;430 429 2371;2372 2 ALEEGDGSVSGSSPR ERKKAELRALEEGDGS SVSGSSPRSDISQPAS R A L P R S 1 1 0 1 0 0 2 3 0 0 1 0 0 0 1 4 0 0 0 1 0 0 15 0 1446.6587 Q8N3X1 Q8N3X1 420 434 FNBP4 Formin-binding protein 4 yes yes 2 4.7446E-07 95.751 By MS/MS By MS/MS By matching 1 1 1 4026400 1413200 1437100 1176100 156 1630 166 580;581;582 431;432 432 2234 2 ALEESESSQLISPPLAQAIR SPLSSKRKALEESESS PPLAQAIRDYVNSLLV K A L I R D 3 1 0 0 0 2 3 0 0 2 3 0 0 0 2 4 0 0 0 0 0 0 20 0 2138.1219 P42166 P42166 359 378 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.0089008 53.557 By MS/MS By matching By matching 1 1 1 14787000 7025600 6430600 1331100 157 1237 167 583;584;585 433 433 1593;1594;1595 1 ALELDSNLYR QACVLMIKALELDSNL ELDSNLYRIGQSKVFF K A L Y R I 1 1 1 1 0 0 1 0 0 0 3 0 0 0 0 1 0 0 1 0 0 0 10 0 1192.6088 P35579 P35579 746 755 MYH9 Myosin-9 yes yes 2 0.016997 62.546 By MS/MS By matching 1 1 389770 250200 139570 0 158 1221 168 586;587 434 434 1 ALELDSNNEK AAIESCNKALELDSNN ELDSNNEKGLFRRGEA K A L E K G 1 0 2 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 10 0 1131.5408 Q02790 Q02790 345 354 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 2 0.0083133 69.598 By MS/MS By matching By matching 1 1 1 1775800 543470 770880 461470 159 1334 169 588;589;590 435 435 1 ALEVAEYLTPVLK VINTVKGKALEVAEYL EYLTPVLKESKFKETG K A L L K E 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 0 1 0 1 2 0 0 13 0 1444.8177 F8WDI0;Q9NT62 F8WDI0 12 24 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes no 2 1.6308E-12 123.96 By MS/MS By MS/MS By MS/MS 1 1 1 7148600 2879800 2007500 2261400 160 700 170 591;592;593 436;437;438 437 3696 3 ALILVGLER NLRQEGVRALILVGLE LILVGLERVVNLERLM R A L E R V 1 1 0 0 0 0 1 1 0 1 3 0 0 0 0 0 0 0 0 1 0 0 9 0 982.61752 E7ENL6;P12111 E7ENL6 1369 1377 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0037992 98.299 By MS/MS By MS/MS By MS/MS 1 1 1 5352100 2662500 1300500 1389000 161 522 171 594;595;596 439;440;441 439 3 ALIQTCLNSPDSPPRSDPTTDQR MITSETGKALIQTCLN SDPTTDQRMSATGFEE K A L Q R M 1 2 1 3 1 2 0 0 0 1 2 0 0 0 4 3 3 0 0 0 0 0 23 1 2568.2238 P11831 P11831 213 235 SRF Serum response factor yes yes 3 0.0029398 50.957 By MS/MS By matching By matching 1 1 1 8579200 3963600 2433000 2182600 162 1148 172 597;598;599 442 442 1499 1 ALLLLCGEDD DTSGDYKKALLLLCGE LLLCGEDD________ K A L D D - 1 0 0 2 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 10 0 1117.5325 D6RBE9;D6RBL5;P08758 D6RBE9 211 220 ANXA5 Annexin;Annexin A5 yes no 1;2 0.0070324 73.975 By matching By matching By MS/MS 1 1 2 2210000 553500 722160 934360 163 489 173 600;601;602;603 443;444 443 1 ALPNNTSSSPQPK LPPGSTKRALPNNTSS TSSSPQPKKKPLDGEY R A L P K K 1 0 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 13 0 1339.6732 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 148 160 TP53 Cellular tumor antigen p53 yes no 2 4.2859E-21 141.73 By MS/MS By MS/MS By MS/MS 1 1 1 48171000 14997000 18798000 14375000 164 89 174 604;605;606 445;446;447;448;449;450;451 448 108;109 7 ALPSLNTGSSSPR QTSCNPSRALPSLNTG NTGSSSPRGVEEPDVI R A L P R G 1 1 1 0 0 0 0 1 0 0 2 0 0 0 2 4 1 0 0 0 0 0 13 0 1285.6626 O14545 O14545 317 329 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2 1.5362E-07 106.55 By MS/MS By MS/MS By MS/MS 1 1 1 47112000 17081000 16505000 13526000 165 980 175 607;608;609 452;453;454 453 1301;1302 3 ALQHTESPSETNKPHSK PSSAKKPKALQHTESP ETNKPHSKSKKRHLDQ K A L S K S 1 0 1 0 0 1 2 0 2 0 1 2 0 0 2 3 2 0 0 0 0 0 17 1 1889.9232 G5E9G6;Q14669;C9JLJ5;C9JSX9;C9JLD7 G5E9G6 136 152 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 4 0.0027997 47.537 By matching By MS/MS 1 1 5952900 2906000 0 3046900 166 737 176 610;611 455 455 1003;3156 1 ALQLSNSPGASSAFLK SADCAKDKALQLSNSP GASSAFLKAETEHNKE K A L L K A 3 0 1 0 0 1 0 1 0 0 3 1 0 1 1 4 0 0 0 0 0 0 16 0 1589.8413 Q12802;H0YMW2 Q12802 977 992 AKAP13 A-kinase anchor protein 13 yes no 2 0.016931 44.765 By MS/MS By MS/MS By matching 1 1 1 1116700 452240 368810 295670 167 1364 177 612;613;614 456;457 457 1795;1796;1797 2 ALRASESGI GTGHNQTRALRASESG LRASESGI________ R A L G I - 2 1 0 0 0 0 1 1 0 1 1 0 0 0 0 2 0 0 0 0 0 0 9 1 902.48214 P48960 P48960 827 835 CD97 CD97 antigen;CD97 antigen subunit alpha;CD97 antigen subunit beta yes yes 2 0.0073491 82.645 By matching By MS/MS By matching 1 1 1 1540100 515260 504940 519930 168 1253 178 615;616;617 458 458 1645 1 ALSASHTDLAH NNCLADSRALSASHTD ASHTDLAH________ R A L A H - 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 2 1 0 0 0 0 0 11 0 1121.5465 H0YG16;H0YJK1 H0YG16 258 268 KLC1 yes no 2 2.2172E-07 136.02 By MS/MS By MS/MS By MS/MS 1 1 1 23781000 8041800 8250600 7488200 169 794 179 618;619;620 459;460;461 460 1079 3 ALSDREEEEEDDEEEEEEVEAAAQR AARSEDGRALSDREEE EVEAAAQRRLAKQISP R A L Q R R 4 2 0 3 0 1 12 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 25 1 2935.1963 Q8N3E9 Q8N3E9 494 518 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 yes yes 3 0.0015125 52.669 By MS/MS By matching By matching 1 1 1 5169700 2145900 1457600 1566200 170 1627 180 621;622;623 462 462 2230 1 ALSDSAVVQQPNCR AAQRTALRALSDSAVV VVQQPNCRTSVPSSKG R A L C R T 2 1 1 1 1 2 0 0 0 0 1 0 0 0 1 2 0 0 0 2 0 0 14 0 1543.7413 P51826 P51826 391 404 AFF3 AF4/FMR2 family member 3 yes yes 2 0.016796 47.712 By matching By MS/MS 1 1 653230 0 395230 258000 171 1278 181 624;625 463 463 1684 1 ALSGVLEQDRVQSLK KNKFDVQKALSGVLEQ QDRVQSLKDKNEATVS K A L L K D 1 1 0 1 0 2 1 1 0 0 3 1 0 0 0 2 0 0 0 2 0 0 15 1 1641.905 E9PJ90;E9PN23;G5E991;E9PMN1;E9PLR4;Q9Y450 E9PJ90 51 65 HBS1L HBS1-like protein yes no 3 0.0068941 51.546 By matching By MS/MS 1 1 788050 407280 0 380770 172 592 182 626;627 464 464 786 1 ALSLGTIPSLTR XLPGRLSRALSLGTIP GTIPSLTRADSGYLFS R A L T R A 1 1 0 0 0 0 0 1 0 1 3 0 0 0 1 2 2 0 0 0 0 0 12 0 1227.7187 H0Y994;H0Y4R5;Q5SNT2 H0Y994 9 20 TMEM201 Transmembrane protein 201 yes no 2 0.014301 53.252 By MS/MS By MS/MS By matching 1 1 1 1295300 451710 443750 399860 173 753 183 628;629;630 465;466 466 1030 2 ALSPVIPLIPR GRWEQEDRALSPVIPL PVIPLIPRASIPVFPD R A L P R A 1 1 0 0 0 0 0 0 0 2 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1174.7438 O14686 O14686 4736 4746 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.002123 84.507 By MS/MS By MS/MS 1 1 2041400 0 1430800 610650 174 983 184 631;632 467;468 467 1312 2 ALSSGGSITSPPLSPALPK NFGPEWLRALSSGGSI PLSPALPKYKLADYRY R A L P K Y 2 0 0 0 0 0 0 2 0 1 3 1 0 0 4 5 1 0 0 0 0 0 19 0 1778.9778 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2 I1E4Y6 17 35 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 8.9643E-24 109.42 By MS/MS By MS/MS 1 1 12203000 0 7232600 4970400 175 881 185 633;634 469;470 469 1183;1184;3198 2 ALSSLHGDDQDSEDEVLTIPEVK HITTKSVKALSSLHGD VLTIPEVKVHSGRGAG K A L V K V 1 0 0 4 0 1 3 1 1 1 3 1 0 0 1 3 1 0 0 2 0 0 23 0 2496.1868 P11717 P11717 2398 2420 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 3 0.0041453 46.958 By MS/MS By MS/MS 1 1 14842000 0 6313000 8529500 176 1147 186 635;636 471;472 472 1494 2 ALTDDSDENEEEDAFTDQKIR MKLPPPYKALTDDSDE AFTDQKIRQRYADLPG K A L I R Q 2 1 1 5 0 1 4 0 0 1 1 1 0 1 0 1 2 0 0 0 0 0 21 1 2440.0514 A0A0U1RRD7;A0A0U1RQW4;Q8NI35 A0A0U1RRD7 23 43 INADL InaD-like protein yes no 3 0.017319 41.988 By matching By MS/MS By matching 1 1 1 2208900 699380 932500 577000 177 256 187 637;638;639 473 473 338 1 ALVEFESNPEETREPGSPPSVQR TSVSRTRRALVEFESN GSPPSVQRAGLGSPER R A L Q R A 1 2 1 0 0 1 5 1 0 0 1 0 0 1 4 3 1 0 0 2 0 0 23 1 2554.23 Q9H6F5;H0YG79 Q9H6F5 31 53 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 2.3372E-11 87.24 By MS/MS By MS/MS By MS/MS 1 1 1 51751000 20922000 13761000 17068000 178 1825 188 640;641;642 474;475;476;477;478 474 2559 5 ALVLIAFAQYLQQCPFEDHVK DLGEENFKALVLIAFA CPFEDHVKLVNEVTEF K A L V K L 3 0 0 1 1 3 1 0 1 1 3 1 0 2 1 0 0 0 1 2 0 0 21 0 2489.2777 A0A0C4DGB6;CON__P02768-1;P02768;A0A087WWT3;H7C013 A0A0C4DGB6 45 65 ALB Serum albumin yes no 3 2.4686E-44 133.78 By MS/MS By MS/MS By MS/MS 1 1 1 24604000 11573000 8396600 4634600 + 179 194 189 643;644;645 479;480;481 480 3 ALVVDVQNGYLYWTDWGDHSLIGR SSGLREPRALVVDVQN GDHSLIGRIGMDGSSR R A L G R I 1 1 1 3 0 1 0 3 1 1 3 0 0 0 0 1 1 2 2 3 0 0 24 0 2776.3609 Q07954 Q07954 3149 3172 LRP1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes yes 3 2.5781E-33 107.45 By matching By MS/MS By matching 1 1 1 12825000 7421500 2833300 2570500 180 1353 190 646;647;648 482 482 84 1 ALVVPEPEPDSDSNQER GDLLTERKALVVPEPE DSDSNQERKDD_____ K A L E R K 1 1 1 2 0 1 3 0 0 0 1 0 0 0 3 2 0 0 0 2 0 0 17 0 1880.8752 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 126 142 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 2 0.0026063 58.83 By matching By matching By MS/MS 2 2 2 19036000 7245700 5996200 5794300 181 399 191 649;650;651;652;653;654 483;484 484 532;533 2 ALYETELADAR GRELTGLKALYETELA ETELADARRALDDTAR K A L A R R 3 1 0 1 0 0 2 0 0 0 2 0 0 0 0 0 1 0 1 0 0 0 11 0 1250.6143 P20700;A0A0D9SFY5;A0A0D9SFE5;E9PBF6 P20700 80 90 LMNB1 Lamin-B1 yes no 2 0.014662 60.518 By MS/MS 1 375720 0 375720 0 182 1180 192 655 485 485 1 ALYLQYTDETFR RIGRLYKKALYLQYTD QYTDETFRTTIEKPVW K A L F R T 1 1 0 1 0 1 1 0 0 0 2 0 0 1 0 0 2 0 2 0 0 0 12 0 1518.7355 E9PFZ2;P00450;D6RE86 E9PFZ2 70 81 CP Ceruloplasmin yes no 2 0.0009546 96.342 By matching By matching By MS/MS 1 1 1 3454100 1835500 679870 938710 183 579 193 656;657;658 486;487 486 2 ALYSTAMESIQGEAR TRRPAPQKALYSTAME ESIQGEARRGGTMETD K A L A R R 3 1 0 0 0 1 2 1 0 1 1 0 1 0 0 2 1 0 1 0 0 0 15 0 1625.7719 A6PW57;Q99755;A2A3N6 A6PW57 346 360 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 2 0.0019327 69.01 By MS/MS 1 800680 0 800680 0 184 313 194 659 488 488 3618 1 AMGIMNSFVNDIFER PDTGISSKAMGIMNSF FVNDIFERIAGEASRL K A M E R I 1 1 2 1 0 0 1 1 0 2 0 0 2 2 0 1 0 0 0 1 0 0 15 0 1742.812 U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q8N257;Q16778;P33778;P23527;P06899 U3KQK0 59 73 HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST3H2BB;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 3-B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J yes no 2 0.0058677 78.096 By MS/MS By MS/MS By MS/MS 1 2 2 6730500 1731100 2624300 2375100 185 1026 195;196 660;661;662;663;664 489;490;491;492 490 75;76 4 AMSLNTLNVDAPR AGAAGMKRAMSLNTLN TLNVDAPRAPGTQFPS R A M P R A 2 1 2 1 0 0 0 0 0 0 2 0 1 0 1 1 1 0 0 1 0 0 13 0 1400.7082 Q6P597 Q6P597 464 476 KLC3 Kinesin light chain 3 yes yes 2 9.8887E-05 96.113 By MS/MS By matching By MS/MS 2 1 2 4598400 2075900 812190 1710300 186 1549 197;198 665;666;667;668;669 493;494;495 493 150 2108 3 AMSTTSISSPQPGK EIFKQKERAMSTTSIS ISSPQPGKLRSPFLQK R A M G K L 1 0 0 0 0 1 0 1 0 1 0 1 1 0 2 4 2 0 0 0 0 0 14 0 1390.6762 H0Y5J4;B4DDD6;Q9UJU6 H0Y5J4 196 209 DBNL Drebrin-like protein yes no 2 4.7503E-48 158.31 By MS/MS By MS/MS By MS/MS 3 3 3 24049000 8608300 8628500 6812600 187 338 199;200 670;671;672;673;674;675;676;677;678 496;497;498;499;500;501;502 500 26 464;465;466;2992;2993 7 ANHTFNSSSSQYCR PITKSWSRANHTFNSS SSSSQYCRPISTQSIT R A N C R P 1 1 2 0 1 1 0 0 1 0 0 0 0 1 0 4 1 0 1 0 0 0 14 0 1657.6903 Q9UQC2 Q9UQC2 552 565 GAB2 GRB2-associated-binding protein 2 yes yes 2 0.015613 48.44 By MS/MS 1 0 0 0 0 188 1946 201 679 503 503 2778;3546;3934 1 ANQQFLVYCEIDGSGNGWTVFQK LYFIKPLKANQQFLVY NGWTVFQKRLDGSVDF K A N Q K R 1 0 2 1 1 3 1 3 0 1 1 1 0 2 0 1 1 1 1 2 0 0 23 0 2660.2329 C9JEU5;C9JC84;P02679;C9JPQ9;C9JU00 C9JEU5 208 230 FGG Fibrinogen gamma chain yes no 2;3 0 174.04 By MS/MS By MS/MS By MS/MS 4 4 3 181200000 77841000 63832000 39522000 189 429 202;203 680;681;682;683;684;685;686;687;688;689;690 504;505;506;507;508;509;510 504 25 7 ANSDIISLNFR LGMENFARANSDIISL DIISLNFRSASMISSD R A N F R S 1 1 2 1 0 0 0 0 0 2 1 0 0 1 0 2 0 0 0 0 0 0 11 0 1248.6463 Q8TC76 Q8TC76 299 309 FAM110B Protein FAM110B yes yes 2 0.0062901 66.989 By MS/MS By matching By matching 1 1 1 1868400 660960 668340 539120 190 1669 204 691;692;693 511 511 2290 1 ANSDTDLVTSESR PENMTLQRANSDTDLV DLVTSESRSSLTASMY R A N S R S 1 1 1 2 0 0 1 0 0 0 1 0 0 0 0 3 2 0 0 1 0 0 13 0 1393.6321 C9JHL2;C9JPI9;Q9P2P5 C9JHL2 46 58 HECW2 E3 ubiquitin-protein ligase HECW2 yes no 2 0.002308 73.781 By MS/MS By MS/MS By MS/MS 1 1 1 3026000 871660 1220600 933780 191 435 205 694;695;696 512;513;514 514 572 3 ANSFVGTAQYVSPELLTEK SPESKQARANSFVGTA SPELLTEKSACKSSDL R A N E K S 2 0 1 0 0 1 2 1 0 0 2 1 0 1 1 2 2 0 1 2 0 0 19 0 2053.0368 E9PER6;Q6A1A2;O15530 E9PER6 212 230 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 yes no 2 0.0055974 55.267 By MS/MS 1 2311300 2311300 0 0 192 570 206 697 515 515 755 1 ANSLGDLYAQK RQLSTCQRANSLGDLY LGDLYAQKNSGVTANG R A N Q K N 2 0 1 1 0 1 0 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 11 0 1178.5932 Q13009 Q13009 229 239 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 yes yes 2 0.0024202 83.226 By matching By MS/MS By MS/MS 1 1 1 6193600 2265400 2052900 1875300 193 1374 207 698;699;700 516;517 516 1814 2 ANSPEKPPEAGAAHKPR ASRTQVQKANSPEKPP AGAAHKPRARLAALKR K A N P R A 4 1 1 0 0 0 2 1 1 0 0 2 0 0 4 1 0 0 0 0 0 0 17 2 1755.9016 F8WDB4;Q9UFC0 F8WDB4 58 74 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 4.1463E-09 92.427 By MS/MS By MS/MS By matching 1 1 1 15475000 5920600 6880200 2674200 194 699 208 701;702;703 518;519 519 938 2 ANVSSPHR XIHEQWEKANVSSPHR ANVSSPHREFPPATAR K A N H R E 1 1 1 0 0 0 0 0 1 0 0 0 0 0 1 2 0 0 0 1 0 0 8 0 866.43586 H0Y555;Q5QPM9;Q5QPM7;Q92530 H0Y555 9 16 PSMF1 Proteasome inhibitor PI31 subunit yes no 2 0.013532 74.173 By MS/MS 1 723390 0 0 723390 195 757 209 704 520 520 1036;1037 1 APAGPSLEETSVSSPK SPPDWWKKAPAGPSLE ETSVSSPKGSSEPCWL K A P P K G 2 0 0 0 0 0 2 1 0 0 1 1 0 0 3 4 1 0 0 1 0 0 16 0 1555.773 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 477 492 HEATR6 HEAT repeat-containing protein 6 yes no 2 3.5497E-05 84.479 By MS/MS By matching By MS/MS 1 1 1 3930100 1372200 1303200 1254700 196 76 210 705;706;707 521;522 521 92;93 2 APATPASATLGR TLSRKSIKAPATPASA PASATLGRPPRIPEPV K A P G R P 4 1 0 0 0 0 0 1 0 0 1 0 0 0 2 1 2 0 0 0 0 0 12 0 1111.5986 I3L3W4;Q9P2A4 I3L3W4 12 23 ABI3 ABI gene family member 3 yes no 3 0.018329 46.706 By MS/MS 1 0 0 0 0 197 891 211 708 523 523 3205 1 APGASPGNPLSPSLSDKDR SLKKFACKAPGASPGN PSLSDKDRGLKGAGGS K A P D R G 2 1 1 2 0 0 0 2 0 0 2 1 0 0 4 4 0 0 0 0 0 0 19 1 1864.9279 Q7Z5J4 Q7Z5J4 1348 1366 RAI1 Retinoic acid-induced protein 1 yes yes 3 0.0044359 55.988 By matching By MS/MS By matching 1 1 1 3292200 1254500 1143000 894650 198 1582 212 709;710;711 524 524 2154 1 APIDTSDVEEK ITAFKMEKAPIDTSDV DTSDVEEKAEEIIAEA K A P E K A 1 0 0 2 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 1 0 0 11 0 1202.5667 D6RIY6;Q06265 D6RIY6 285 295 EXOSC9 Exosome complex component RRP45 yes no 2 0.0034138 91.961 By matching By MS/MS By MS/MS 1 1 1 3409400 941770 1326700 1140900 199 499 213 712;713;714 525;526 525 639;3042 2 APILIATDVASR LNEFRSGKAPILIATD IATDVASRGLGSPALG K A P S R G 3 1 0 1 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1225.703 A0A0U1RQJ0;J3KTA4;P17844;Q92841 A0A0U1RQJ0 28 39 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 yes no 2 0.0038683 76.1 By matching By MS/MS By matching 1 1 1 1431700 477420 866410 87840 200 250 214 715;716;717 527 527 1 APLKPYPVSPSDK EFIFTTIKAPLKPYPV YPVSPSDKVLIQEKTQ K A P D K V 1 0 0 1 0 0 0 0 0 0 1 2 0 0 4 2 0 0 1 1 0 0 13 1 1397.7555 Q5TCC6;J3KR24;A0A0A0MSX9;P41252 Q5TCC6 92 104 IARS Isoleucine--tRNA ligase, cytoplasmic yes no 2;3 0.011104 62.732 By MS/MS By matching By MS/MS 1 1 2 4223400 1467700 1557600 1198100 201 158 215 718;719;720;721 528;529 529 210;211 2 APQTSSSPPPVR HSPSPRPRAPQTSSSP SSSPPPVRRGASSSPQ R A P V R R 1 1 0 0 0 1 0 0 0 0 0 0 0 0 4 3 1 0 0 1 0 0 12 0 1222.6306 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 699 710 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0 240.18 By MS/MS By MS/MS By MS/MS 2 1 1 30478000 10784000 12080000 7614300 202 322 216;217 722;723;724;725 530;531;532;533 532 429;430;2980 3 APSASVDSSLYNLPR IYDSPPSRAPSASVDS SSLYNLPRSYSHDVLP R A P P R S 2 1 1 1 0 0 0 0 0 0 2 0 0 0 2 4 0 0 1 1 0 0 15 0 1575.7893 B7Z3B9;Q13480 B7Z3B9 146 160 GAB1 GRB2-associated-binding protein 1 yes no 2 0.00017256 83.137 By MS/MS By MS/MS By matching 1 1 1 3914700 1348400 1640300 926040 203 371 218 726;727;728 534;535 534 495;3635 2 APSPAPSSVPLGSEKPSNVSQDR QSVSSGVRAPSPAPSS PSNVSQDRKVPVPIGT R A P D R K 2 1 1 1 0 1 1 1 0 0 1 1 0 0 5 6 0 0 0 2 0 0 23 1 2306.1503 H0YM23;O75179 H0YM23 2283 2305 ANKRD17 Ankyrin repeat domain-containing protein 17 yes no 3 0.008988 48.115 By matching By matching By MS/MS 1 1 1 3665000 1424600 1386300 854100 204 804 219 729;730;731 536 536 1093 0 APSPTKPLR AAQRSGPRAPSPTKPL PSPTKPLRRSQRKSGS R A P L R R 1 1 0 0 0 0 0 0 0 0 1 1 0 0 3 1 1 0 0 0 0 0 9 1 965.56581 B5MBX0;Q96FF9 B5MBX0 19 27 CDCA5 Sororin yes no 2 0.014401 70.908 By MS/MS By MS/MS By matching 1 1 1 7010100 2264200 2751400 1994500 205 359 220 732;733;734 537;538 537 489 2 APSRQDVYGPQPQVR RPSMEGYRAPSRQDVY YGPQPQVRVGGSSVDL R A P V R V 1 2 0 1 0 3 0 1 0 0 0 0 0 0 3 1 0 0 1 2 0 0 15 1 1696.8645 C9JZR2;O60716;E9PRE2 C9JZR2 250 264 CTNND1 Catenin delta-1 yes no 3 0.017666 41.378 By matching By MS/MS By matching 1 1 1 4220400 1283000 1218800 1718700 206 459 221 735;736;737 539 539 3654 0 APSSPVAKPGPVK AKVPASKRAPSSPVAK VAKPGPVKTLTRKKNK R A P V K T 2 0 0 0 0 0 0 1 0 0 0 2 0 0 4 2 0 0 0 2 0 0 13 1 1233.7081 A0A0C4DG31;Q9GZR2 A0A0C4DG31 12 24 REXO4 RNA exonuclease 4 yes no 2 1.2877E-07 108.68 By matching By MS/MS By MS/MS 1 1 1 5331500 1566100 2310300 1455200 207 189 222 738;739;740 540;541 540 259;260 2 APTKEFYA PSSAAYQKAPTKEFYA APTKEFYA________ K A P Y A - 2 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 8 1 925.45453 E7ESK6;E9PBI9;P34741 E7ESK6 158 165 SDC2 Syndecan;Syndecan-2 yes no 2 0.0083858 98.997 By matching By MS/MS By matching 1 1 1 2330100 734150 823030 772930 208 539 223 741;742;743 542 542 3668 1 APVHFVEPLSPTGVAGHR NSQDHKVKAPVHFVEP PTGVAGHRKAPRLGQG K A P H R K 2 1 0 0 0 0 1 2 2 0 1 0 0 1 3 1 1 0 0 3 0 0 18 0 1869.985 Q5T5Y3 Q5T5Y3 1071 1088 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 yes yes 3 0.00045085 75.316 By matching By MS/MS By MS/MS 1 1 1 2673200 977150 792250 903790 209 1507 224 744;745;746 543;544;545 544 2038 3 APVPSTCSSTFPEELSPPSHQAK DLENFLQKAPVPSTCS SPPSHQAKREIRFLEL K A P A K R 2 0 0 0 1 1 2 0 1 0 1 1 0 1 5 5 2 0 0 1 0 0 23 0 2453.1533 A0A087WY61;Q14980;F5H0Z7;F5H763;F5H6Y5;F5H4J1 A0A087WY61 154 176 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0009439 55.127 By matching By MS/MS By MS/MS 1 1 1 6440100 2887600 1638100 1914500 210 77 225 747;748;749 546;547 547 94 2 APVQPQQSPAAAPGGTDEKPSGK MEEGGRDKAPVQPQQS TDEKPSGKERRDAGDK K A P G K E 4 0 0 1 0 3 1 3 0 0 0 2 0 0 5 2 1 0 0 1 0 0 23 1 2217.1026 F8WBS8;C9JPC0;Q13200 F8WBS8 9 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 3 0.00028378 72.167 By MS/MS By matching By matching 1 1 1 6519100 2377900 2124800 2016400 211 442 226 750;751;752 548 548 581 1 APVSGSRSPDREASGSGGR ________________ EASGSGGRRRSSSKSP M A P G R R 2 3 0 1 0 0 1 4 0 0 0 0 0 0 2 5 0 0 0 1 0 0 19 2 1828.8776 Q8N5F7 Q8N5F7 2 20 NKAP NF-kappa-B-activating protein yes yes 3 0.0090277 60.489 By matching By MS/MS By matching 1 1 1 4798000 1780200 1296100 1721700 212 1635 227 753;754;755 549 549 2241 1 AQAVSEEEEEEEGK SKEAPKRKAQAVSEEE EEEEEEGKSSSPKKKI K A Q G K S 2 0 0 0 0 1 7 1 0 0 0 1 0 0 0 1 0 0 0 1 0 0 14 0 1562.6584 G3V529;Q9GZR7 G3V529 35 48 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 0.0098479 52.265 By matching By MS/MS By matching 1 1 1 1489700 597940 386560 505190 213 724 228 756;757;758 550 550 977 1 AQAVSEEEEEEEGKSSSPK SKEAPKRKAQAVSEEE EGKSSSPKKKIKLKKS K A Q P K K 2 0 0 0 0 1 7 1 0 0 0 2 0 0 1 4 0 0 0 1 0 0 19 1 2048.9022 G3V529;Q9GZR7 G3V529 35 53 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 0.001003 73.918 By MS/MS By MS/MS By matching 1 1 1 4581700 2000700 1361400 1219600 214 724 229 759;760;761 551;552 551 977 2 AQEEYERDHCSGSR MKKRKMQRAQEEYERD RDHCSGSRGGGGLPRP R A Q S R G 1 2 0 1 1 1 3 1 1 0 0 0 0 0 0 2 0 0 1 0 0 0 14 1 1722.7016 Q6NUJ2 Q6NUJ2 97 110 C11orf87 Uncharacterized protein C11orf87 yes yes 2 0.012449 46.844 By MS/MS 1 2149700 2149700 0 0 215 1541 230 762 553 553 3864 0 AQGEPVAGHESPKIPYEK QLRDRLCRAQGEPVAG SPKIPYEKQQLPKGRP R A Q E K Q 2 0 0 0 0 1 3 2 1 1 0 2 0 0 3 1 0 0 1 1 0 0 18 1 1935.969 H0YAB3;D6RHZ5;H7BXG7;D6REX3;O94979 H0YAB3 406 423 SEC31A Protein transport protein Sec31A yes no 3 0.0014109 70.41 By MS/MS By MS/MS By matching 1 1 1 33852000 12459000 11553000 9840200 216 494 231 763;764;765 554;555 554 636 2 AQIHDLVLVGGSTR LRDAKLDKAQIHDLVL VLVGGSTRIPKVQKLL K A Q T R I 1 1 0 1 0 1 0 2 1 1 2 0 0 0 0 1 1 0 0 2 0 0 14 0 1464.8049 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 330 343 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 3 0.015095 39.033 By MS/MS 1 451540 0 451540 0 217 222 232 766 556 556 1 AQIPEGDYLSYR GDPGSTRRAQIPEGDY EGDYLSYREFHSAGRT R A Q Y R E 1 1 0 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 0 12 0 1410.6779 Q96RT1 Q96RT1 1097 1108 ERBB2IP Protein LAP2 yes yes 2 0.0035301 72.096 By matching By MS/MS 1 1 2713600 0 1431500 1282100 218 1757 233 767;768 557 557 2426;3897 1 AQISSPNLR VARIAPQRAQISSPNL QISSPNLRTRPPPRRE R A Q L R T 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 9 0 984.53524 H0Y507;Q5TCZ1 H0Y507 344 352 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.0087204 70.056 By matching By MS/MS 1 1 1084900 517790 0 567150 219 756 234 769;770 558 558 1033 1 AQKLPDLSPVENK QPRAGPIKAQKLPDLS DLSPVENKEHKPGPIG K A Q N K E 1 0 1 1 0 1 1 0 0 0 2 2 0 0 2 1 0 0 0 1 0 0 13 1 1437.7827 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2100 2112 PRRC2C Protein PRRC2C yes no 2 0.0038669 74.678 By matching By matching By MS/MS 1 1 1 3830200 1292900 1396200 1141200 220 526 235 771;772;773 559 559 672 1 AQLEPVASPAK ELQLVTYKAQLEPVAS EPVASPAKKPKVQSGS K A Q A K K 3 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 0 0 0 1 0 0 11 0 1109.6081 Q15149 Q15149 1428 1438 PLEC Plectin yes yes 2 0.015708 54.023 By matching By MS/MS By MS/MS 1 1 1 1423700 362100 580470 481160 221 1435 236 774;775;776 560;561 560 1924 2 AQLSPGIYDDTSAR STLHEAPKAQLSPGIY IYDDTSARRTPVSYQN K A Q A R R 2 1 0 2 0 1 0 1 0 1 1 0 0 0 1 2 1 0 1 0 0 0 14 0 1492.7158 E7EVK1;A0A088AWL3;O75376 E7EVK1 100 113 NCOR1 Nuclear receptor corepressor 1 yes no 2 4.6558E-14 130.27 By MS/MS By MS/MS By MS/MS 1 1 1 14666000 5434800 4570600 4660800 222 117 237 777;778;779 562;563;564 562 155 3 AQNEFKDEAQSLSHSPK EDLASDVRAQNEFKDE QSLSHSPKRVPTTLSI R A Q P K R 2 0 1 1 0 2 2 0 1 0 1 2 0 1 1 3 0 0 0 0 0 0 17 1 1914.9072 Q8NEN9 Q8NEN9 507 523 PDZD8 PDZ domain-containing protein 8 yes yes 3 0.0012263 70.555 By MS/MS By MS/MS By MS/MS 1 1 1 3228400 1309100 1111900 807400 223 1657 238 780;781;782 565;566;567 565 2270;2271 3 AQQELVPPQQQASPPQLPK QGQPGLERAQQELVPP ASPPQLPKAMFSELSN R A Q P K A 2 0 0 0 0 6 1 0 0 0 2 1 0 0 5 1 0 0 0 1 0 0 19 0 2083.1062 F1T0I1;J3KNL6;O15027 F1T0I1 1057 1075 SEC16A Protein transport protein Sec16A yes no 3 0.0057867 47.754 By MS/MS By MS/MS By MS/MS 1 1 1 4864000 1880600 1333800 1649600 224 621 239 783;784;785 568;569;570 568 840 3 AQSLVISPPAPSPR SEIHVEVKAQSLVISP SPPAPSPRKTPVASDQ K A Q P R K 2 1 0 0 0 1 0 0 0 1 1 0 0 0 4 3 0 0 0 1 0 0 14 0 1418.7882 P46013 P46013 573 586 MKI67 Antigen KI-67 yes yes 2 1.5775E-12 115.31 By MS/MS By MS/MS By MS/MS 1 1 1 6571400 2213600 2225100 2132700 225 1241 240 786;787;788 571;572;573 573 1604 3 AQSNGSGNGSDSEMDTSSLER ITIRNINKAQSNGSGN MDTSSLERGRKVSIVS K A Q E R G 1 1 2 2 0 1 2 3 0 0 1 0 1 0 0 6 1 0 0 0 0 0 21 0 2127.8611 Q9NRY4 Q9NRY4 1125 1145 ARHGAP35 Rho GTPase-activating protein 35 yes yes 2 0.018348 40.025 By MS/MS 1 0 0 0 0 226 1854 241 789 574 574 2609;2610;2611;2612 1 AQSSPASATFPVSVQEPPTKPR GGHRPLSRAQSSPASA QEPPTKPRFTTGLVYD R A Q P R F 3 1 0 0 0 2 1 0 0 0 0 1 0 1 5 4 2 0 0 2 0 0 22 1 2281.1703 P56524 P56524 630 651 HDAC4 Histone deacetylase 4 yes yes 3 0.0092582 45.328 By MS/MS By matching 1 1 2009400 1279600 0 729760 227 1299 242 790;791 575 575 1710 1 AQSTDSLGTSGSLQSK MFKDGLRRAQSTDSLG TSGSLQSKALGYNYKA R A Q S K A 1 0 0 1 0 2 0 2 0 0 2 1 0 0 0 5 2 0 0 0 0 0 16 0 1565.7533 Q15276;I3L456 Q15276 405 420 RABEP1 Rab GTPase-binding effector protein 1 yes no 2 0.013299 58.04 By matching By MS/MS By MS/MS 1 1 1 4272400 1546300 1625200 1100900 228 1436 243 792;793;794 576;577 577 1925;3380 2 AQSYDIQAWK PRRRLRNRAQSYDIQA SYDIQAWKKQCEELLN R A Q W K K 2 0 0 1 0 2 0 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 10 0 1208.5826 Q8WWQ0 Q8WWQ0 1313 1322 PHIP PH-interacting protein yes yes 2 0.006932 65.395 By matching By MS/MS By MS/MS 1 1 1 2884400 948930 1075900 859590 229 1685 244 795;796;797 578;579 578 2310 2 AQTLPTSVVTITSESSPGKR QSTPASSRAQTLPTSV SESSPGKREKDKEKDK R A Q K R E 1 1 0 0 0 1 1 1 0 1 1 1 0 0 2 4 4 0 0 2 0 0 20 1 2058.0957 A0A087WUZ3;Q01082 A0A087WUZ3 2328 2347 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 3 7.1229E-35 120.32 By MS/MS By MS/MS By MS/MS 2 1 2 29237000 13705000 7677400 7854500 230 45 245;246 798;799;800;801;802 580;581;582;583 582 56;57;58;2875;2876 4 AQTPPGPSLSGSKSPCPQEK ISPYPKVKAQTPPGPS KSPCPQEKSKDSLVQS K A Q E K S 1 0 0 0 1 2 1 2 0 0 1 2 0 0 5 4 1 0 0 0 0 0 20 1 2051.9946 Q9UQ35 Q9UQ35 1001 1020 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0016355 60.104 By MS/MS By MS/MS By MS/MS 2 2 2 31744000 12239000 12445000 7059400 231 1945 247;248 803;804;805;806;807;808 584;585;586;587 585 2751;2752;2753;3538 4 ARGDSEALDEES SDRQERERARGDSEAL SEALDEES________ R A R E S - 2 1 0 2 0 0 3 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 12 1 1277.5372 Q7Z4V5;A0A087WZ99 Q7Z4V5 660 671 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 2 0.00058721 89.231 By MS/MS By MS/MS By MS/MS 1 1 1 11159000 3831300 4215100 3112700 232 1581 249 809;810;811 588;589;590;591 589 2150 4 ARLENMSPR SKTENGDKARLENMSP RLENMSPRQVVERSAT K A R P R Q 1 2 1 0 0 0 1 0 0 0 1 0 1 0 1 1 0 0 0 0 0 0 9 1 1072.5448 A0A1B0GWG1;A0A1B0GTX7;E9PEZ5;A0A1B0GUL6;Q9UPP5 A0A1B0GWG1 135 143 KIAA1107 Uncharacterized protein KIAA1107 yes no 2 0.018266 55.531 By MS/MS 1 0 0 0 0 233 273 250 812 592 592 363 1 ARSPTDDKVK RSQEKIGKARSPTDDK SPTDDKVKIEDKSKSK K A R V K I 1 1 0 2 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 2 1115.5935 Q13523 Q13523 255 264 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 3 0.010875 77.204 By matching By MS/MS By MS/MS 1 1 1 10842000 2449200 5075100 3317600 234 1392 251 813;814;815 593;594 593 1847 2 ARVGGSDEEASGIPSR KSLEGMKKARVGGSDE EASGIPSRTASLELDL K A R S R T 2 2 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 16 1 1586.7649 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 H7C446 114 129 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2;3 0.0018315 60.602 By MS/MS By matching By matching 2 1 1 11606000 6823500 2795800 1987000 235 172 252 816;817;818;819 595;596 596 235 2 ASAGRLTPESQSK SAPQSHARASAGRLTP LTPESQSKTSETSKGS R A S S K T 2 1 0 0 0 1 1 1 0 0 1 1 0 0 1 3 1 0 0 0 0 0 13 1 1330.6841 H7BZ56;H7BZC2;J3KPK1;C9JFZ1;A0A0D9SGJ6;J3KQV8;O43426 H7BZ56 35 47 SYNJ1 Synaptojanin-1 yes no 2 0.014914 51.092 By MS/MS 1 383370 383370 0 0 236 219 253 820 597 597 302 0 ASAGTPSLSAGVSPK RRRGRRKRASAGTPSL LSAGVSPKRRALPSVA R A S P K R 3 0 0 0 0 0 0 2 0 0 1 1 0 0 2 4 1 0 0 1 0 0 15 0 1328.6936 Q8TEK3 Q8TEK3 1092 1106 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific yes yes 2 1.4332E-23 134.88 By MS/MS By MS/MS By matching 1 1 1 3693900 1198500 1230300 1265100 237 1676 254 821;822;823 598;599 598 2302;2303 2 ASALCLNFNCMLILIPVSR GSTLAWARASALCLNF LILIPVSRNLISFIRG R A S S R N 2 1 2 0 2 0 0 0 0 2 4 0 1 1 1 2 0 0 0 1 0 0 19 0 2191.1316 Q9HBY0 Q9HBY0 56 74 NOX3 NADPH oxidase 3 yes yes 3 0.015637 40.515 By MS/MS 1 522300 522300 0 0 238 1838 255 824 600 600 2581;2582 1 ASAPSPNAQVACDHCLK DVWTPPARASAPSPNA VACDHCLKEAAVKTCL R A S L K E 4 0 1 1 2 1 0 0 1 0 1 1 0 0 2 2 0 0 0 1 0 0 17 0 1824.8247 Q14258 Q14258 96 112 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.0015965 57.197 By MS/MS By MS/MS By MS/MS 1 1 1 5181800 2182300 1268200 1731400 239 1409 256 825;826;827 601;602;603 603 1879 3 ASAVSELSPR YGTGSASRASAVSELS AVSELSPRERSPALKS R A S P R E 2 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 0 10 0 1015.5298 Q9Y2W1 Q9Y2W1 236 245 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 1.8294E-55 166.24 By MS/MS By MS/MS By MS/MS 1 1 1 118120000 40644000 42717000 34760000 240 1960 257 828;829;830 604;605;606;607;608;609 604 2795 6 ASDPGLPAEEPKEK HLPPRIHRASDPGLPA PAEEPKEKSSRKVAEP R A S E K S 2 0 0 1 0 0 3 1 0 0 1 2 0 0 3 1 0 0 0 0 0 0 14 1 1466.7253 F8VPD4;P27708 F8VPD4 1795 1808 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 2 0.015264 48.214 By matching By MS/MS By matching 1 1 1 3482000 953580 1576200 952170 241 664 258 831;832;833 610 610 890 0 ASEDTTSGSPPKK KVEIGQKRASEDTTSG TSGSPPKKSSAGPKRD R A S K K S 1 0 0 1 0 0 1 1 0 0 0 2 0 0 2 3 2 0 0 0 0 0 13 1 1303.6256 H0YER7;G3V1C3;Q9BZZ5 H0YER7 271 283 API5 Apoptosis inhibitor 5 yes no 2 7.8766E-124 183.28 By matching By MS/MS By MS/MS 1 2 2 112510000 43636000 38738000 30140000 242 708 259 834;835;836;837;838 611;612;613 613 953;954 3 ASEGLDACASPTK EAPLGEMRASEGLDAC DACASPTKSASACNRL R A S T K S 3 0 0 1 1 0 1 1 0 0 1 1 0 0 1 2 1 0 0 0 0 0 13 0 1305.5871 Q92618 Q92618 107 119 ZNF516 Zinc finger protein 516 yes yes 2 0.013607 51.03 By matching By matching By MS/MS 1 1 1 2003000 568820 828470 605680 243 1699 260 839;840;841 614 614 2331 1 ASEIDQVVPAAQSSPINCEKR EEKASEYRASEIDQVV SPINCEKRENLLPFVG R A S K R E 3 1 1 1 1 2 2 0 0 2 0 1 0 0 2 3 0 0 0 2 0 0 21 1 2298.1274 O94782;C9JWX4;C9JC88 O94782 54 74 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes no 3 0.0034865 66.386 By matching By MS/MS By matching 1 1 1 3457800 1414700 1260200 782980 244 1049 261 842;843;844 615 615 1407;1408 1 ASEYKEFIQK GEELPLDRASEYKEFI EYKEFIQKIISMLQDA R A S Q K I 1 0 0 0 0 1 2 0 0 1 0 2 0 1 0 1 0 0 1 0 0 0 10 1 1241.6292 P0C671 P0C671 386 395 C6orf222 Uncharacterized protein C6orf222 yes yes 3 0.016047 48.091 By MS/MS By matching By matching 1 1 1 1892700 1051800 698580 142390 245 1133 262 845;846;847 616 616 1480;3765 0 ASFDHSPDSLPLR PRGRTKKKASFDHSPD SPDSLPLRSSGRQAKK K A S L R S 1 1 0 2 0 0 0 0 1 0 2 0 0 1 2 3 0 0 0 0 0 0 13 0 1440.6997 Q8NB78 Q8NB78 12 24 KDM1B Lysine-specific histone demethylase 1B yes yes 3 0.012946 45.33 By matching By MS/MS 1 1 710350 342730 0 367620 246 1648 263 848;849 617 617 2252 1 ASGDPGASGMSPR GGGGRGGKASGDPGAS GASGMSPRASPLPPPP K A S P R A 2 1 0 1 0 0 0 3 0 0 0 0 1 0 2 3 0 0 0 0 0 0 13 0 1188.5193 Q8NDT2 Q8NDT2 99 111 RBM15B Putative RNA-binding protein 15B yes yes 2 3.436E-05 101.38 By matching By MS/MS By MS/MS 1 2 2 2961500 414430 1538400 1008700 247 1655 264 850;851;852;853;854 618;619;620 618 2266 3 ASGKTSQVGAASAPAKESPR AKALLQAKASGKTSQV APAKESPRKGAAPAPP K A S P R K 5 1 0 0 0 1 1 2 0 0 0 2 0 0 2 4 1 0 0 1 0 0 20 2 1898.981 J3KQ96;E7ETY2;Q13428 J3KQ96 364 383 TCOF1 Treacle protein yes no 3 1.8483E-12 91.733 By matching By matching By MS/MS 1 1 1 4107400 610930 1921500 1575000 248 545 265 855;856;857 621 621 705 1 ASGPPVSELITK SAGAAKRKASGPPVSE PVSELITKAVAASKER K A S T K A 1 0 0 0 0 0 1 1 0 1 1 1 0 0 2 2 1 0 0 1 0 0 12 0 1197.6605 P10412;P16403;P16402 P10412 35 46 HIST1H1E;HIST1H1C;HIST1H1D Histone H1.4;Histone H1.2;Histone H1.3 yes no 2 0.0026009 81.525 By MS/MS By matching By matching 1 1 1 3821900 990350 2499000 332550 249 1137 266 858;859;860 622 622 1 ASGQAFELILSPR QVKELEKRASGQAFEL FELILSPRSKESVPEF R A S P R S 2 1 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 13 0 1387.746 A2A2D0;P16949 A2A2D0 15 27 STMN1 Stathmin yes no 2;3 0 244 By MS/MS By MS/MS By MS/MS 6 5 5 114910000 41788000 39204000 33920000 250 293 267;268 861;862;863;864;865;866;867;868;869;870;871;872;873;874;875;876 623;624;625;626;627;628;629;630;631;632;633;634;635;636;637;638;639;640;641;642;643 631 386;387 21 ASGVAVSDGVIK ________________ AVSDGVIKVFNDMKVR M A S I K V 2 0 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 0 0 3 0 0 12 0 1101.603 E9PP50;P23528;E9PS23 E9PP50 2 13 CFL1 Cofilin-1 yes no 2 0.0026262 73.881 By MS/MS By matching By MS/MS 1 1 1 3717500 1342800 1116000 1258600 251 613 269 877;878;879 644;645 645 833 2 ASLEAAIADAEQR IEGLKGQRASLEAAIA AIADAEQRGELAIKDA R A S Q R G 5 1 0 1 0 1 2 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 13 0 1343.6681 CON__H-INV:HIT000292931;CON__P05787;P05787 CON__H-INV:HIT000292931 289 301 KRT8 Keratin, type II cytoskeletal 8 yes no 2 0.016107 56.043 By MS/MS 1 306650 306650 0 0 + 252 461 270 880 646 646 1 ASLEDAPVDDLTR SPDQISHRASLEDAPV APVDDLTRKFTYLGSQ R A S T R K 2 1 0 3 0 0 1 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 13 0 1400.6783 C9J6P4;Q7Z2W4 C9J6P4 283 295 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.010215 54.898 By matching By MS/MS By matching 1 1 1 2766300 890520 947370 928410 253 418 271 881;882;883 647 647 555 1 ASMSEFLESEDGEVEQQR VCRPKRTKASMSEFLE DGEVEQQRTYSSGHNR K A S Q R T 1 1 0 1 0 2 5 1 0 0 1 0 1 1 0 3 0 0 0 1 0 0 18 0 2069.8848 J3QQW9;Q15022 J3QQW9 515 532 SUZ12 Polycomb protein SUZ12 yes no 2 0.0013224 73.273 By MS/MS By matching 1 1 6167600 3455700 2711900 0 254 920 272 884;885 648 648 1231 1 ASNTSTPTKGNTETSASASQTNHVK EAAAKAAKASNTSTPT ASQTNHVKDVKKIKIE K A S V K D 3 0 3 0 0 1 1 1 1 0 0 2 0 0 1 5 6 0 0 1 0 0 25 1 2518.1896 Q14004 Q14004 489 513 CDK13 Cyclin-dependent kinase 13 yes yes 3 0.00060515 58.345 By matching By MS/MS By matching 1 1 1 2891400 716910 1423800 750610 255 1400 273 886;887;888 649 649 3366 1 ASPAEGSAGSPGSPTCCR SGCDAEGRASPAEGSA PGSPTCCRCKELGLEK R A S C R C 3 1 0 0 2 0 1 3 0 0 0 0 0 0 3 4 1 0 0 0 0 0 18 0 1747.7254 A4D1S0 A4D1S0 203 220 KLRG2 Killer cell lectin-like receptor subfamily G member 2 yes yes 2 0.002733 50.957 By matching By MS/MS By matching 1 1 1 2131000 498980 1241500 390490 256 302 274 889;890;891 650 650 400 0 ASPESRRLGSQGGASQNTR TLLVAKTKASPESRRL GGASQNTREWLWGHTD K A S T R E 2 3 1 0 0 2 1 3 0 0 1 0 0 0 1 4 1 0 0 0 0 0 19 2 1957.9678 J3KP49 J3KP49 98 116 FICD yes yes 3 0.0063536 44.998 By MS/MS By matching 1 1 478650 310550 0 168100 257 903 275 892;893 651 651 50 1212;3211 1 ASRVPSSDEEVVEEPQSR FQDSTEPRASRVPSSD VVEEPQSRRTRMSLGT R A S S R R 1 2 0 1 0 1 4 0 0 0 0 0 0 0 2 4 0 0 0 3 0 0 18 1 1999.9447 Q9C0C2 Q9C0C2 1615 1632 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 3 0.00070016 76.744 By MS/MS By matching By MS/MS 1 1 1 3983100 2115500 231200 1636400 258 1804 276 894;895;896 652;653 652 2511;2512 2 ASSFSGISILTR SMRPPVTKASSFSGIS SGISILTRGDSIGSSK K A S T R G 1 1 0 0 0 0 0 1 0 2 1 0 0 1 0 4 1 0 0 0 0 0 12 0 1237.6667 H7C0E9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5;H0YIX9 H7C0E9 112 123 R3HDM2 R3H domain-containing protein 2 yes no 2 0.004003 70.628 By MS/MS By MS/MS By matching 1 1 1 3541300 1514200 1209400 817620 259 260 277 897;898;899 654;655 655 341 2 ASSHSSQTQGGGSVTK TSQRSRGRASSHSSQT QGGGSVTKKRKLESTE R A S T K K 1 0 0 0 0 2 0 3 1 0 0 1 0 0 0 5 2 0 0 1 0 0 16 0 1517.707 A0A0C4DGC5;Q3BDU5;Q5TCI8;P02545 A0A0C4DGC5 28 43 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0034228 50.827 By MS/MS By MS/MS 1 1 4990200 2156600 2833600 0 260 195 278 900;901 656;657 657 268;269;270;271 2 ASSLEDLVLK PCSAPLARASSLEDLV SLEDLVLKEASTAVST R A S L K E 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 0 1 0 0 10 0 1073.5968 Q15477 Q15477 254 263 SKIV2L Helicase SKI2W yes yes 2 8.6204E-15 146.71 By MS/MS By MS/MS By MS/MS 1 1 1 27288000 10195000 8290000 8803100 261 1442 279 902;903;904 658;659;660 658 1931 3 ASSLGEIDESSELR EPPPAPPRASSLGEID IDESSELRVLDIPGQD R A S L R V 1 1 0 1 0 0 3 1 0 1 2 0 0 0 0 4 0 0 0 0 0 0 14 0 1491.7053 Q16513 Q16513 581 594 PKN2 Serine/threonine-protein kinase N2 yes yes 2 0.00078428 80.507 By MS/MS By MS/MS By MS/MS 1 1 1 45854000 16965000 13083000 15806000 262 1455 280 905;906;907 661;662;663;664 663 1951;1952 4 ASSLNENVDHSALLK GVRLSLPRASSLNENV VDHSALLKLGTSVSER R A S L K L 2 0 2 1 0 0 1 0 1 0 3 1 0 0 0 3 0 0 0 1 0 0 15 0 1596.8107 D3DTX6;Q96SB3 D3DTX6 98 112 PPP1R9B Neurabin-2 yes no 2;3 0.0024577 65.472 By MS/MS By MS/MS 1 2 7901100 3278000 4623100 0 263 476 281 908;909;910 665;666;667 665 617;618 3 ASSLNFLNK PPNPRMKRASSLNFLN SSLNFLNKSVEEPTQP R A S N K S 1 0 2 0 0 0 0 0 0 0 2 1 0 1 0 2 0 0 0 0 0 0 9 0 992.5291 Q9H0B6;A8MZ87 Q9H0B6 580 588 KLC2 Kinesin light chain 2 yes no 2 0.0020133 102.06 By matching By MS/MS By MS/MS 1 1 1 23562000 8998400 7859100 6704800 264 1809 282 911;912;913 668;669 668 2523 2 ASSLNVLNVGGK PKNPGMKRASSLNVLN NVLNVGGKAAEDRFQE R A S G K A 1 0 2 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 2 0 0 12 0 1157.6404 H0YG16;H0YJK1;G3V5R9 H0YG16 229 240 KLC1 yes no 2 0.0070783 62.338 By MS/MS 1 6858000 0 6858000 0 265 794 283 914 670 670 1080;1081 1 ASSLSESSPPK KPLSPDSRASSLSESS LSESSPPKAMKFQAPA R A S P K A 1 0 0 0 0 0 1 0 0 0 1 1 0 0 2 5 0 0 0 0 0 0 11 0 1088.535 F8VS07;F8VQE1;Q9UHB6;F8VRN8 F8VS07 65 75 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.0012163 87.719 By MS/MS By MS/MS By MS/MS 1 1 1 2773000 901120 1111500 760330 266 666 284 915;916;917 671;672;673;674;675 674 891 5 ASSPAQCVTPVQTVV RSTSSSERASSPAQCV VTPVQTVV________ R A S V V - 2 0 0 0 1 2 0 0 0 0 0 0 0 0 2 2 2 0 0 4 0 0 15 0 1542.7712 Q13614 Q13614 629 643 MTMR2 Myotubularin-related protein 2 yes yes 2 0.0036932 59.864 By matching By matching By MS/MS 1 1 1 3057800 1226900 1033100 797770 267 1398 285 918;919;920 676 676 1853 1 ASSPPDRIDIFGR RRERDRERASSPPDRI DRIDIFGRTVSKRSSL R A S G R T 1 2 0 2 0 0 0 1 0 2 0 0 0 1 2 2 0 0 0 0 0 0 13 1 1429.7314 Q9NWB6 Q9NWB6 75 87 ARGLU1 Arginine and glutamate-rich protein 1 yes yes 2;3 0.010129 64.224 By MS/MS By MS/MS By MS/MS 2 2 2 44761000 16995000 13735000 14031000 268 1867 286 921;922;923;924;925;926 677;678;679;680 677 2633;2634 4 ASSPSDIISSK RSEGMRSKASSPSDII PSDIISSKDSVVKGHS K A S S K D 1 0 0 1 0 0 0 0 0 2 0 1 0 0 1 5 0 0 0 0 0 0 11 0 1090.5506 Q9ULD9 Q9ULD9 962 972 ZNF608 Zinc finger protein 608 yes yes 2 0.0064539 66.326 By matching By MS/MS By matching 1 1 1 1732600 687690 515840 529060 269 1923 287 927;928;929 681 681 2716 1 ASSVGVLSPQKK SEGSMKVKASSVGVLS GVLSPQKKSPPTTMLL K A S K K S 1 0 0 0 0 1 0 1 0 0 1 2 0 0 1 3 0 0 0 2 0 0 12 1 1199.6874 Q9UGU5 Q9UGU5 490 501 HMGXB4 HMG domain-containing protein 4 yes yes 2 1.0328E-07 112.02 By MS/MS By MS/MS By MS/MS 1 1 1 7104100 2855500 2371300 1877200 270 1904 288 930;931;932 682;683;684 682 2682 3 ASSVSTKESPAR SVKPAQVKASSVSTKE STKESPARKAAPAPGK K A S A R K 2 1 0 0 0 0 1 0 0 0 0 1 0 0 1 4 1 0 0 1 0 0 12 1 1218.6204 J3KQ96;E7ETY2;Q13428 J3KQ96 225 236 TCOF1 Treacle protein yes no 2;3 5.9969E-05 105.58 By MS/MS By MS/MS By MS/MS 2 2 2 26466000 9077300 10013000 7375400 271 545 289 933;934;935;936;937;938 685;686;687;688 685 706 4 ASTSDYQVISDRQTPK RPLATAYKASTSDYQV ISDRQTPKKDESLVSK K A S P K K 1 1 0 2 0 2 0 0 0 1 0 1 0 0 1 3 2 0 1 1 0 0 16 1 1794.8748 Q8NFH5 Q8NFH5 295 310 NUP35 Nucleoporin NUP53 yes yes 3 7.392E-06 73.918 By MS/MS By MS/MS By MS/MS 1 1 1 3499200 1165100 1303200 1030900 272 1661 290 939;940;941 689;690;691 689 3466 1 ASTVGEIVNLMSVDAQR VITNSVKRASTVGEIV LMSVDAQRFMDLAPFL R A S Q R F 2 1 1 1 0 1 1 1 0 1 1 0 1 0 0 2 1 0 0 3 0 0 17 0 1788.904 O15438 O15438 403 419 ABCC3 Canalicular multispecific organic anion transporter 2 yes yes 3 0.010952 40.801 By matching By MS/MS 1 1 1072800 615880 0 456930 273 995 291 942;943 692 692 1327 1 ASVTGYLLVYESVDGTVK LLTWRPPRASVTGYLL ESVDGTVKEVIVGPDT R A S V K E 1 0 0 1 0 0 1 2 0 0 2 1 0 0 0 2 2 0 2 4 0 0 18 0 1899.983 F5H7V9;E9PC84;J3QSU6;P24821;H0YGZ3 F5H7V9 1549 1566 TNC Tenascin yes no 2;3 1.2467E-23 139.19 By MS/MS By MS/MS By MS/MS 2 2 2 47157000 8863000 19315000 18979000 274 563 292 944;945;946;947;948;949 693;694;695;696;697 695 5 ATADDELSFK AIAKYDFKATADDELS ADDELSFKRGDILKVL K A T F K R 2 0 0 2 0 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 10 0 1095.5084 P62993;J3KT38;J3QRL5 P62993 11 20 GRB2 Growth factor receptor-bound protein 2 yes no 2 0.0025443 102.62 By MS/MS By MS/MS By matching 1 1 1 13402000 10788000 1665900 947860 275 1316 293 950;951;952 698;699 698 2 ATAGDTHLGGEDFDNR DDGIFEVKATAGDTHL GGEDFDNRLVNHFVEE K A T N R L 2 1 1 3 0 0 1 3 1 0 1 0 0 1 0 0 2 0 0 0 0 0 16 0 1674.7234 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 222 237 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A no no 2;3 0.00067656 66.387 By MS/MS By MS/MS By MS/MS 2 1 2 6198100 2940700 1455500 1801900 276 222 294 953;954;955;956;957 700;701;702 700 2 ATAPQTQHVSPMR EKSSPGHRATAPQTQH TQHVSPMRQVEPPAKK R A T M R Q 2 1 0 0 0 2 0 0 1 0 0 0 1 0 2 1 2 0 0 1 0 0 13 0 1422.7038 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PPR1;E9PL12;E9PQZ1;E9PK06 E9PL71 100 112 EEF1D Elongation factor 1-delta yes no 2;3 5.7418E-12 113.65 By MS/MS By MS/MS By MS/MS 4 4 4 321850000 96407000 121760000 103680000 277 109 295;296 958;959;960;961;962;963;964;965;966;967;968;969 703;704;705;706;707;708;709;710;711 711 9 140 5 ATAVMPDGQFK GHPAPNFKATAVMPDG VMPDGQFKDISLSDYK K A T F K D 2 0 0 1 0 1 0 1 0 0 0 1 1 1 1 0 1 0 0 1 0 0 11 0 1163.5645 A0A0A0MSI0;Q06830 A0A0A0MSI0 17 27 PRDX1 Peroxiredoxin-1 yes no 2 0.0040034 80.688 By MS/MS 1 969380 0 969380 0 278 150 297 970 712 712 1 ATAVVDGAFK GKPAPDFKATAVVDGA AVVDGAFKEVKLSDYK K A T F K E 3 0 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 2 0 0 10 0 977.5182 P32119;A6NIW5 P32119 17 26 PRDX2 Peroxiredoxin-2 yes no 2 0.0061726 78.149 By MS/MS 1 665390 0 665390 0 279 1213 298 971 713 713 1 ATISDEEIER LPSASTSKATISDEEI ISDEEIERQLKALGVD K A T E R Q 1 1 0 1 0 0 3 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 10 0 1161.5513 C9J0A7;Q9UQN3 C9J0A7 166 175 CHMP2B Charged multivesicular body protein 2b yes no 2 0.0013568 96.604 By MS/MS By matching By matching 1 1 1 65430000 23530000 22908000 18992000 280 400 299 972;973;974 714 714 534 1 ATISNDGATILK LIVDGRGKATISNDGA NDGATILKLLDVVHPA K A T L K L 2 0 1 1 0 0 0 1 0 2 1 1 0 0 0 1 2 0 0 0 0 0 12 0 1202.6507 Q99832;F8WAM2 Q99832 56 67 CCT7 T-complex protein 1 subunit eta yes no 2 0.014088 60.167 By MS/MS 1 592900 0 592900 0 281 1768 300 975 715 715 1 ATNESEDEIPQLVPIGK GRGKAQVKATNESEDE PQLVPIGKKTPANEKV K A T G K K 1 0 1 1 0 1 3 1 0 2 1 1 0 0 2 1 1 0 0 1 0 0 17 0 1838.9262 O76021;J3QSV6 O76021 357 373 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 2.6788E-97 166.36 By MS/MS By MS/MS By MS/MS 1 1 2 121900000 46546000 37126000 38226000 282 1045 301 976;977;978;979 716;717;718;719;720 718 1402;3259 5 ATPELGSSENSASSPPR YFTGKIPKATPELGSS NSASSPPRFKTEKMES K A T P R F 2 1 1 0 0 0 2 1 0 0 1 0 0 0 3 5 1 0 0 0 0 0 17 0 1685.7857 Q9BX63 Q9BX63 1019 1035 BRIP1 Fanconi anemia group J protein yes yes 2 0.0054202 52.79 By matching By MS/MS By matching 1 1 1 2007400 819830 792230 395380 283 1791 302 980;981;982 721 721 2485 1 ATSACAPISSPK VPGKRPPRATSACAPI CAPISSPKTNGLSKDM R A T P K T 3 0 0 0 1 0 0 0 0 1 0 1 0 0 2 3 1 0 0 0 0 0 12 0 1188.5809 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C211 A0A087X1U1 359 370 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.0071417 62.042 By matching By MS/MS 1 1 2077500 0 1195600 881860 284 107 303 983;984 722 722 134 1 ATSDTLESPPKIIPK RQTRSKRKATSDTLES SPPKIIPKYISENESP K A T P K Y 1 0 0 1 0 0 1 0 0 2 1 2 0 0 3 2 2 0 0 0 0 0 15 1 1595.877 O94782 O94782 306 320 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 2 0.0040631 66.56 By MS/MS By matching By matching 1 1 1 2707200 1126900 723420 856920 285 1049 304 985;986;987 723 723 1409 1 ATVTPSPVK KMPKPRLKATVTPSPV TVTPSPVKGKGKVGRP K A T V K G 1 0 0 0 0 0 0 0 0 0 0 1 0 0 2 1 2 0 0 2 0 0 9 0 898.51238 Q9H1E3 Q9H1E3 176 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 8.2341E-113 187.16 By MS/MS By MS/MS By MS/MS 2 2 2 288330000 106600000 97303000 84426000 286 1813 305;306 988;989;990;991;992;993 724;725;726;727;728;729;730;731 725 2532;3496;3497 8 ATVTPSPVKGK KMPKPRLKATVTPSPV TPSPVKGKGKVGRPTA K A T G K G 1 0 0 0 0 0 0 1 0 0 0 2 0 0 2 1 2 0 0 2 0 0 11 1 1083.6288 Q9H1E3 Q9H1E3 176 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 5.1595E-103 182.41 By MS/MS By MS/MS By MS/MS 3 3 3 250880000 83176000 83999000 83706000 287 1813 307;308 994;995;996;997;998;999;1000;1001;1002 732;733;734;735;736;737;738;739;740;741;742;743;744;745;746;747;748;749;750 733 2532;3496;3497 19 ATYINLKPAR NPEAEEMKATYINLKP YINLKPARKYRFH___ K A T A R K 2 1 1 0 0 0 0 0 0 1 1 1 0 0 1 0 1 0 1 0 0 0 10 1 1145.6557 Q9H467 Q9H467 273 282 CUEDC2 CUE domain-containing protein 2 yes yes 2 0.0092917 63.076 By MS/MS By matching By matching 1 1 1 2001000 737200 723690 540090 288 1822 309 1003;1004;1005 751 751 3912 1 AVAFQDCPVDLFFVLDTSESVALR QDEPETPRAVAFQDCP TSESVALRLKPYGALV R A V L R L 3 1 0 3 1 1 1 0 0 0 3 0 0 3 1 2 1 0 0 4 0 0 24 0 2698.3313 A0A087X0S5;P12109 A0A087X0S5 28 51 COL6A1 Collagen alpha-1(VI) chain yes no 3 0.00093558 56.404 By MS/MS 1 601990 601990 0 0 289 101 310 1006 752 752 0 AVAGLEGTSQQALQR AKLPPVCRAVAGLEGT TSQQALQRSRMVRRTF R A V Q R S 3 1 0 0 0 3 1 2 0 0 2 0 0 0 0 1 1 0 0 1 0 0 15 0 1527.8005 A0A075B6F5;F5GXR6;Q8IUG5 A0A075B6F5 1142 1156 MYO18B Unconventional myosin-XVIIIb yes no 2 0.0146 43.512 By MS/MS By matching By matching 1 1 1 1048100 459700 296310 292130 290 5 311 1007;1008;1009 753 753 2 0 AVAGVMITASHNR PYAVQKLKAVAGVMIT MITASHNRKEDNGYKV K A V N R K 3 1 1 0 0 0 0 1 1 1 0 0 1 0 0 1 1 0 0 2 0 0 13 0 1325.6874 Q6PCE3 Q6PCE3 166 178 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 2;3 7.5782E-12 114.7 By MS/MS By MS/MS By MS/MS 2 1 1 4853100 2088900 1516600 1247600 291 1552 312;313 1010;1011;1012;1013 754;755;756;757 756 151 2110;3429 4 AVCMLSNTTAIAEAWAR GDLAKVQRAVCMLSNT AIAEAWARLDHKFDLM R A V A R L 5 1 1 0 1 0 1 0 0 1 1 0 1 0 0 1 2 1 0 1 0 0 17 0 1863.8971 P68363;Q71U36;Q6PEY2;Q13748;C9J2C0;P68366;Q9NY65;V9GZ17 P68363 374 390 TUBA1B;TUBA1A;TUBA3E;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain;Tubulin alpha-4A chain;Tubulin alpha-8 chain yes no 2 0.0032756 66.498 By matching By MS/MS 1 1 2488700 1807900 0 680800 292 1318 314 1014;1015 758 758 1 AVCSTYLQSR GSASHVSKAVCSTYLQ CSTYLQSRYYRAPEII K A V S R Y 1 1 0 0 1 1 0 0 0 0 1 0 0 0 0 2 1 0 1 1 0 0 10 0 1183.5656 Q5SQL3;J3KP92;Q86Z02;H7BXX9;Q9H2X6 Q5SQL3 347 356 HIPK1;HIPK2 Homeodomain-interacting protein kinase 1;Homeodomain-interacting protein kinase 2 yes no 2 0.011622 68.846 By matching By MS/MS By matching 1 1 1 1743900 555730 781750 406390 293 904 315 1016;1017;1018 759 759 3726 0 AVDGYVKPQIK YYTPVLAKAVDGYVKP GYVKPQIKQVVPEFVN K A V I K Q 1 0 0 1 0 1 0 1 0 1 0 2 0 0 1 0 0 0 1 2 0 0 11 1 1216.6816 K7EM17;K7EK35;P51692;P42229 K7EM17 178 188 STAT5A;STAT5B Signal transducer and activator of transcription;Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription 5A yes no 2 0.0010108 102.62 By matching By MS/MS By matching 1 1 1 2362500 700200 868460 793840 294 937 316 1019;1020;1021 760 760 3729 1 AVFVDLEPTVIDEVR GAGKHVPRAVFVDLEP PTVIDEVRTGTYRQLF R A V V R T 1 1 0 2 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 4 0 0 15 0 1700.8985 P68363;F5H5D3;Q9BQE3;Q71U36;F8VVB9;F8VRZ4;F8VS66;F8VQQ4;F8VRK0;F8VX09;F8VWV9 P68363 65 79 TUBA1B;TUBA1C;TUBA1A Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain yes no 2;3 1.2562E-19 146.16 By MS/MS By MS/MS By MS/MS 2 2 2 37568000 16373000 9227000 11968000 295 1318 317 1022;1023;1024;1025;1026;1027 761;762;763 761 3 AVGASFPLYEPAK ESVQTPSKAVGASFPL FPLYEPAKMKTPVQYS K A V A K M 3 0 0 0 0 0 1 1 0 0 1 1 0 1 2 1 0 0 1 1 0 0 13 0 1348.7027 P46013 P46013 332 344 MKI67 Antigen KI-67 yes yes 2 0.0057819 67.113 By MS/MS 1 307070 0 307070 0 296 1241 318 1028 764 764 3787 1 AVGMPSPVSPK PSPGLGSKAVGMPSPV MPSPVSPKLSPGNSGN K A V P K L 1 0 0 0 0 0 0 1 0 0 0 1 1 0 3 2 0 0 0 2 0 0 11 0 1068.5638 Q9UHB7 Q9UHB7 1050 1060 AFF4 AF4/FMR2 family member 4 yes yes 2 0.0024826 76.522 By matching By MS/MS By MS/MS 2 2 3 4798100 1370100 1847300 1580700 297 1905 319;320 1029;1030;1031;1032;1033;1034;1035 765;766;767 767 2683;2684 3 AVIVSSPK SSSKPSIKAVIVSSPK AVIVSSPKAKATVSKT K A V P K A 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 2 0 0 0 2 0 0 8 0 799.48035 Q14966 Q14966 1396 1403 ZNF638 Zinc finger protein 638 yes yes 2 0.013119 91.658 By MS/MS By MS/MS By MS/MS 1 1 1 4837400 1627000 1845100 1365400 298 1423 321 1036;1037;1038 768;769;770;771;772 769 1902;1903 5 AVLASQTSLTPLGR LSNLSERRAVLASQTS TSLTPLGRNGRSIPAT R A V G R N 2 1 0 0 0 1 0 1 0 0 3 0 0 0 1 2 2 0 0 1 0 0 14 0 1412.7987 E7EPP7;Q6ZWJ1 E7EPP7 434 447 STXBP4 Syntaxin-binding protein 4 yes no 2 0.0020365 70.373 By matching By matching By MS/MS 1 1 1 2374600 733100 657740 983710 299 528 322 1039;1040;1041 773 773 678 1 AVLSDSPQLSEGK HLVEEVARAVLSDSPQ SPQLSEGKEIKLEELI R A V G K E 1 0 0 1 0 1 1 1 0 0 2 1 0 0 1 3 0 0 0 1 0 0 13 0 1329.6776 Q5SYF9;Q5VY60;Q7Z4H7 Q5SYF9 63 75 HAUS6 HAUS augmin-like complex subunit 6 yes no 2 5.1483E-05 90.759 By MS/MS By MS/MS By MS/MS 1 1 1 4729200 1396200 1731800 1601200 300 1499 323 1042;1043;1044 774;775;776 776 2019 3 AVLVDLEPGTMDSVR TGGKYVPRAVLVDLEP PGTMDSVRSGPFGQIF R A V V R S 1 1 0 2 0 0 1 1 0 0 2 0 1 0 1 1 1 0 0 3 0 0 15 0 1600.8131 P68371;P04350;Q3ZCM7;M0R0X0;M0QY85;M0QY37;M0QX14;A0A075B724;M0QZL7;M0R278 P68371 63 77 TUBB4B;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain yes no 2 0.0073866 58.274 By matching By MS/MS By matching 1 2 2 1784600 183710 1262500 338390 301 1319 324;325 1045;1046;1047;1048;1049 777;778 777 1 AVLYADYR HEDRPSSRAVLYADYR AVLYADYRAPGPARFD R A V Y R A 2 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 1 0 0 8 0 969.49198 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 433 440 KIRREL Kin of IRRE-like protein 1 yes no 2 0.017188 46.994 By matching By MS/MS 1 1 663300 0 346550 316750 302 344 326 1050;1051 779 779 3629;3630 1 AVMDDFAAFVEK KATKEQLKAVMDDFAA DFAAFVEKCCKADDKE K A V E K C 3 0 0 2 0 0 1 0 0 0 0 1 1 2 0 0 0 0 0 2 0 0 12 0 1341.6275 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 570 581 ALB Serum albumin yes no 2 0.0046336 87.298 By MS/MS By matching By matching 2 2 2 5427900 2249700 1501300 1676900 + 303 194 327;328 1052;1053;1054;1055;1056;1057 780;781 780 16 2 AVNTQALSGAGILR LESSELPRAVNTQALS LSGAGILRMVNKAADA R A V L R M 3 1 1 0 0 1 0 2 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1369.7678 O60749 O60749 270 283 SNX2 Sorting nexin-2 yes yes 2 0.0031574 67.115 By MS/MS 1 390610 390610 0 0 304 1024 329 1058 782 782 1371 1 AVPLTVAKSQFSRSSK NKVYLSGKAVPLTVAK SQFSRSSKAHNQKMKL K A V S K A 2 1 0 0 0 1 0 0 0 0 1 2 0 1 1 4 1 0 0 2 0 0 16 2 1704.9523 Q96GM8 Q96GM8 482 497 TOE1 Target of EGR1 protein 1 yes yes 3 0.013869 45.704 By matching By matching By MS/MS 1 1 1 6405200 1801500 2400900 2202900 305 1735 330 1059;1060;1061 783 783 2383;2384;2385 1 AVPMAPAPASPGSSNDSSAR PCEFEHRKAVPMAPAP SSNDSSARSQERAGGL K A V A R S 5 1 1 1 0 0 0 1 0 0 0 0 1 0 4 5 0 0 0 1 0 0 20 0 1868.8687 Q66K74 Q66K74 750 769 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 3 0.003417 50.252 By matching By MS/MS By MS/MS 1 1 1 2472800 726630 917740 828410 306 1528 331 1062;1063;1064 784;785 785 2078;2079 2 AVPPVSPELR TLSPEHWKAVPPVSPE PPVSPELRKPGPPLSP K A V L R K 1 1 0 0 0 0 1 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 10 0 1063.6026 Q96JM3 Q96JM3 411 420 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0044892 70.942 By MS/MS By MS/MS By MS/MS 2 2 2 3453600 2432600 0 1021000 307 1743 332 1065;1066;1067;1068;1069;1070 786;787;788;789;790;791 790 2394 6 AVPSPTTGEEGSVHSR ENVSEALRAVPSPTTG EEGSVHSREAKESSAA R A V S R E 1 1 0 0 0 0 2 2 1 0 0 0 0 0 2 3 2 0 0 2 0 0 16 0 1609.7696 Q5SYE7 Q5SYE7 1230 1245 NHSL1 NHS-like protein 1 yes yes 3 0.00096166 65.511 By matching By MS/MS By MS/MS 1 1 1 4513600 1377700 1795000 1340800 308 1498 333 1071;1072;1073 792;793 792 2018 2 AVPVESPVQKV RLKQRGKKAVPVESPV VESPVQKV________ K A V K V - 1 0 0 0 0 1 1 0 0 0 0 1 0 0 2 1 0 0 0 4 0 0 11 1 1151.655 Q8TB61 Q8TB61 422 432 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 yes yes 2 0.018264 66.663 By MS/MS 1 0 0 0 0 309 1667 334 1074 794 794 2287 1 AVSPAPQSSSR TWPVHRARAVSPAPQS PAPQSSSRLQPPFSPH R A V S R L 2 1 0 0 0 1 0 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 11 0 1085.5465 A0A075B784;Q9P275 A0A075B784 740 750 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.010908 66.92 By MS/MS 1 2585400 2585400 0 0 310 13 335 1075 795;796 795 12 2 AVSVPASFFR PRGRRSRRAVSVPASF SVPASFFRRLAPSPAR R A V F R R 2 1 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 0 0 2 0 0 10 0 1079.5764 O14654 O14654 425 434 IRS4 Insulin receptor substrate 4 yes yes 2 0.0003638 108.7 By MS/MS By MS/MS By MS/MS 1 1 1 8440000 3171500 3045400 2223000 311 982 336 1076;1077;1078 797;798;799;800;801;802;803;804;805;806 802 1306 10 AVTAVTATAASDR ________________ TATAASDRMESDSDSD M A V D R M 5 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 2 0 0 13 0 1232.6361 K7EQ06;K7EJP7 K7EQ06 2 14 HDGFRP2 yes no 2 0.0062801 62.68 By matching By matching By MS/MS 1 1 1 1424700 462520 661970 300190 312 934 337 1079;1080;1081 807 807 1245 1 AVTELNEPLSNEDR DDMASAMKAVTELNEP EPLSNEDRNLLSVAYK K A V D R N 1 1 2 1 0 0 3 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1585.7584 Q04917 Q04917 29 42 YWHAH 14-3-3 protein eta yes yes 2 0.0053178 67.456 By matching By MS/MS By matching 1 1 1 2030900 609950 1020900 399980 313 1342 338 1082;1083;1084 808 808 1 AVTEQGAELSNEER DDMATCMKAVTEQGAE AELSNEERNLLSVAYK K A V E R N 2 1 1 0 0 1 4 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 14 0 1531.7114 P27348;E9PG15 P27348 28 41 YWHAQ 14-3-3 protein theta yes no 2 1.3726E-12 117.09 By MS/MS By MS/MS By MS/MS 1 1 1 3753600 1203100 1865300 685200 314 1197 339 1085;1086;1087 809;810;811 811 3 AVTIANSPSKPSEK AKMEHGPKAVTIANSP SPSKPSEKDSVVSLES K A V E K D 2 0 1 0 0 0 1 0 0 1 0 2 0 0 2 3 1 0 0 1 0 0 14 1 1427.762 Q8NEF9 Q8NEF9 197 210 SRFBP1 Serum response factor-binding protein 1 yes yes 2;3 3.8792E-08 108.66 By matching By MS/MS By MS/MS 2 2 2 7151700 2234500 2871800 2045400 315 1656 340 1088;1089;1090;1091;1092;1093 812;813;814;815 813 2268;2269 4 AVTPVPTKTEEVSNLK ESAPGSPRAVTPVPTK TEEVSNLKTLPKGLSA R A V L K T 1 0 1 0 0 0 2 0 0 0 1 2 0 0 2 1 3 0 0 3 0 0 16 1 1711.9356 A0A0B4J210;Q6PKG0;E5RH50;H0YBW1 A0A0B4J210 524 539 LARP1 La-related protein 1 yes no 2;3 0.0099783 57.745 By MS/MS By MS/MS By MS/MS 2 2 2 32648000 10766000 13669000 8212400 316 177 341 1094;1095;1096;1097;1098;1099 816;817;818;819 816 2927 4 AVVVSPKEENK SSPRQVKRAVVVSPKE VSPKEENKAAEPPPPK R A V N K A 1 0 1 0 0 0 2 0 0 0 0 2 0 0 1 1 0 0 0 3 0 0 11 1 1198.6558 G3V5E1;O75909 G3V5E1 336 346 CCNK Cyclin-K yes no 2 1.9796E-05 128.57 By MS/MS By MS/MS By MS/MS 1 2 2 9203900 3083700 3776600 2343600 317 726 342 1100;1101;1102;1103;1104 820;821;822;823 820 978 3 AVYIGVHVPFSK KEELESHRAVYIGVHV GVHVPFSKESRRRHRH R A V S K E 1 0 0 0 0 0 0 1 1 1 0 1 0 1 1 1 0 0 1 3 0 0 12 0 1315.7289 C9JRP1;A0A0A0MST8;E9PFN4;Q9Y6M7 C9JRP1 42 53 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 yes no 2 0.015401 53.683 By MS/MS 1 377590 377590 0 0 318 156 343 1105 824 824 3590 1 AYEYVECPIR SVPAHQERAYEYVECP EYVECPIRGTAAENKE R A Y I R G 1 1 0 0 1 0 2 0 0 1 0 0 0 0 1 0 0 0 2 1 0 0 10 0 1298.5965 P53701 P53701 60 69 HCCS Cytochrome c-type heme lyase yes yes 2 0.0044769 74.301 By MS/MS By MS/MS By MS/MS 1 1 1 727660 251740 236380 239540 319 1291 344 1106;1107;1108 825;826;827 826 3813 3 AYKEGKLQK PDIIKDQKAYKEGKLQ YKEGKLQKALEDAFLA K A Y Q K A 1 0 0 0 0 1 1 1 0 0 1 3 0 0 0 0 0 0 1 0 0 0 9 2 1063.6026 O15355 O15355 84 92 PPM1G Protein phosphatase 1G yes yes 2 0.018765 50.127 By MS/MS 1 1318800 1318800 0 0 320 994 345 1109 828 828 3748 1 AYLEGLCVEWLR AREAEQLRAYLEGLCV GLCVEWLRRYLENGKE R A Y L R R 1 1 0 0 1 0 2 1 0 0 3 0 0 0 0 0 0 1 1 1 0 0 12 0 1507.7493 P30488;P30487 P30488 182 193 HLA-B HLA class I histocompatibility antigen, B-50 alpha chain;HLA class I histocompatibility antigen, B-49 alpha chain no no 2 1.0947E-07 111.91 By MS/MS By MS/MS By MS/MS 1 1 1 3154000 1062900 970830 1120300 321 1209 346 1110;1111;1112 829;830;831 830 3 AYQDQISPVPGAPK TELIERLRAYQDQISP SPVPGAPKAPAATSIL R A Y P K A 2 0 0 1 0 2 0 1 0 1 0 1 0 0 3 1 0 0 1 1 0 0 14 0 1469.7514 E7ER32;A0A087X287;B0QY83;A0A087WU73;W0Z7M9;Q969V6 E7ER32 379 392 MKL1;mkl1 MKL/myocardin-like protein 1 yes no 2 0.0059901 58.079 By MS/MS By matching 1 1 4035100 0 2095300 1939900 322 36 347 1113;1114 832 832 39 1 AYSSFGGGR DFDTYDDRAYSSFGGG YSSFGGGRGSRGSAGG R A Y G R G 1 1 0 0 0 0 0 3 0 0 0 0 0 1 0 2 0 0 1 0 0 0 9 0 900.40898 Q15056 Q15056 11 19 EIF4H Eukaryotic translation initiation factor 4H yes yes 2 0.0048155 82.452 By MS/MS By MS/MS By MS/MS 2 1 2 4374100 1994200 1069100 1310700 323 1430 348 1115;1116;1117;1118;1119 833;834;835;836;837 834 3846 5 AYTHQVVTR KSFGSPNRAYTHQVVT YTHQVVTRWYRAPELL R A Y T R W 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 2 0 1 2 0 0 9 0 1073.5618 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 75 83 CDK7 Cyclin-dependent kinase 7 yes no 2 0.0086607 101.39 By MS/MS By matching By matching 1 1 1 10235000 3128900 4194600 2911100 324 479 349 1120;1121;1122 838 838 3034 1 CAPSAGSPAAAVGR GTERGPGRCAPSAGSP SPAAAVGRESPGAAAT R C A G R E 5 1 0 0 1 0 0 2 0 0 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1270.6088 Q7L2J0 Q7L2J0 54 67 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 0.013498 49.482 By matching By MS/MS 1 1 1637500 0 269210 1368300 325 1572 350 1123;1124 839 839 2136 1 CDSSPDSAEDVR QFSVLFTKCDSSPDSA PDSAEDVRKLCPDCPL K C D V R K 1 1 0 3 1 0 1 0 0 0 0 0 0 0 1 3 0 0 0 1 0 0 12 0 1336.5201 CON__P12763;P02765 CON__P12763 132 143 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 2 0.00143 82.069 By matching By MS/MS By matching 1 1 1 1620200 596480 587920 435800 + 326 470 351 1125;1126;1127 840 840 615 1 CDSSPDSAEDVRK QFSVLFTKCDSSPDSA DSAEDVRKLCPDCPLL K C D R K L 1 1 0 3 1 0 1 0 0 0 0 1 0 0 1 3 0 0 0 1 0 0 13 1 1464.6151 CON__P12763;P02765 CON__P12763 132 144 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 2 0.0040904 72.815 By MS/MS By MS/MS By MS/MS 1 1 1 3526300 856970 1609100 1060200 + 327 470 352 1128;1129;1130 841;842;843 841 615 3 CDVMYGIEDTQDTVSLTVDGVVFHYR ASDAGLYRCDVMYGIE DGVVFHYRAATSRYTL R C D Y R A 0 1 0 4 1 1 1 2 1 1 1 0 1 1 0 1 3 0 2 5 0 0 26 0 3018.3739 Q86W61;D6RGZ6;E9PF17;P13611 Q86W61 130 155 VCAN Versican core protein yes no 3 1.7115E-06 73.994 By MS/MS By MS/MS By MS/MS 1 1 1 14020000 7132400 3421700 3466100 328 498 353 1131;1132;1133 844;845;846 844 34 3 CETSASELER FNRDDRGRCETSASEL TSASELERMNPGPGGK R C E E R M 1 1 0 0 1 0 3 0 0 0 1 0 0 0 0 2 1 0 0 0 0 0 10 0 1180.503 H3BTQ3;P41440 H3BTQ3 220 229 SLC19A1 Folate transporter 1 yes no 2 0.010743 61.48 By matching By matching By MS/MS 1 1 1 2123200 771960 700700 650510 329 848 354 1134;1135;1136 847 847 1140 1 CGKTFNWSSILTNNK EKSYKCKKCGKTFNWS SSILTNNKKIHTEQKP K C G N K K 0 0 3 0 1 0 0 1 0 1 1 2 0 1 0 2 2 1 0 0 0 0 15 1 1768.8567 Q15940 Q15940 23 37 ZNF726P1 Putative zinc finger protein 726P1 yes yes 3 0.014532 45.213 By MS/MS 1 0 0 0 0 330 1453 355 1137 848 848 1946;1947;3389 1 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK PPVVLRLKCGSGPVHI DEEEEDVKLLSISGKR K C G V K L 2 0 0 3 1 1 8 3 2 1 1 1 0 0 1 3 0 0 0 4 0 0 31 0 3379.4634 P06748;E5RI98 P06748 104 134 NPM1 Nucleophosmin yes no 4 8.5319E-38 97.771 By MS/MS By MS/MS By MS/MS 1 1 1 61857000 23605000 12697000 25554000 331 1114 356 1138;1139;1140 849;850;851;852 850 1457 4 CGSSEDLHDSVR RDSEEGPRCGSSEDLH EDLHDSVREGPDLDRP R C G V R E 0 1 0 2 1 0 1 1 1 0 1 0 0 0 0 3 0 0 0 1 0 0 12 0 1360.5677 Q7Z4V5 Q7Z4V5 631 642 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes yes 2 0.0016746 79.744 By matching By MS/MS By matching 1 1 1 3731300 1310000 1399200 1022100 332 1581 357 1141;1142;1143 853 853 2151 1 CIACQAAKLSPR QNKVTDNKCIACQAAK QAAKLSPRDTAKQTGI K C I P R D 3 1 0 0 2 1 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 12 1 1373.6908 P49790 P49790 678 689 NUP153 Nuclear pore complex protein Nup153 yes yes 2;3 0.00058986 89.466 By MS/MS By MS/MS By MS/MS 2 2 2 16378000 5864000 5457300 5057100 333 1260 358 1144;1145;1146;1147;1148;1149 854;855;856;857 854 1655 4 CKQLTQEMMTEK DAAATKDRCKQLTQEM TQEMMTEKERSNVVIT R C K E K E 0 0 0 0 1 2 2 0 0 0 1 2 2 0 0 0 2 0 0 0 0 0 12 1 1525.6939 Q86UP2 Q86UP2 355 366 KTN1 Kinectin yes yes 2 0.016036 43.651 By MS/MS 1 0 0 0 0 334 1595 359 1150 858 858 3446 1 CLPGVLASPELR LPSYLQDRCLPGVLAS VLASPELRSYPYAFSV R C L L R S 1 1 0 0 1 0 1 1 0 0 3 0 0 0 2 1 0 0 0 1 0 0 12 0 1310.7017 A0A075B6Q3;Q5H9F3 A0A075B6Q3 89 100 BCORL1 BCL-6 corepressor-like protein 1 yes no 2 0.013354 53.947 By MS/MS By MS/MS By matching 1 1 1 1665500 593070 506780 565640 335 9 360 1151;1152;1153 859;860 860 6 2 CLSLSAGQTTLSR HQLLVVARCLSLSAGQ AGQTTLSRERWLRAKQ R C L S R E 1 1 0 0 1 1 0 1 0 0 3 0 0 0 0 3 2 0 0 0 0 0 13 0 1392.7031 Q9BTE3 Q9BTE3 602 614 MCMBP Mini-chromosome maintenance complex-binding protein yes yes 2 0.012512 52.278 By matching By MS/MS 1 1 1268000 235160 1032800 0 336 1779 361 1154;1155 861 861 2468 1 CLSPDDSTVK ALGEAEERCLSPDDST SPDDSTVKMASPPPSG R C L V K M 0 0 0 2 1 0 0 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 10 0 1120.507 E9PGC8;P78559 E9PGC8 1222 1231 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.011448 60.691 By matching By MS/MS By MS/MS 1 1 1 2288500 879260 769820 639430 337 582 362 1156;1157;1158 862;863;864 862 764 3 CLSYGGTSQLR HPPSPPKRCLSYGGTS YGGTSQLRVPEEPAAE R C L L R V 0 1 0 0 1 1 0 2 0 0 2 0 0 0 0 2 1 0 1 0 0 0 11 0 1240.587 H0Y894;O95382 H0Y894 686 696 MAP3K6 Mitogen-activated protein kinase kinase kinase 6 yes no 2 0.0062901 66.989 By matching By matching By MS/MS 1 1 1 1116200 325960 472620 317650 338 770 363 1159;1160;1161 865;866 866 1051 2 CLVAGLLSPR LIPDGYNRCLVAGLLS VAGLLSPRFVDVQPSS R C L P R F 1 1 0 0 1 0 0 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 10 0 1084.6063 Q8WYP5 Q8WYP5 521 530 AHCTF1 Protein ELYS yes yes 2 0.0068291 65.5 By MS/MS By MS/MS By matching 1 1 1 1610000 572510 578730 458730 339 1691 364 1162;1163;1164 867;868;869 869 2315 3 CQENGQELSPIALEPGPEPHR QELVPGLRCQENGQEL EPGPEPHRAKQEARNQ R C Q H R A 1 1 1 0 1 2 4 2 1 1 2 0 0 0 4 1 0 0 0 0 0 0 21 0 2357.107 H0YB23;A0A0A0MR08;E7EST9;B5MEG5 H0YB23 14 34 USP19 Ubiquitin carboxyl-terminal hydrolase yes no 3 0.010407 41.908 By matching By matching By MS/MS 1 1 1 2284300 859000 651220 774090 340 126 365 1165;1166;1167 870 870 167 1 CQVFEETQIGGER LSADVLGRCQVFEETQ ETQIGGERYNFFTGCP R C Q E R Y 0 1 0 0 1 2 3 2 0 1 0 0 0 1 0 0 1 0 0 1 0 0 13 0 1551.6988 Q99832 Q99832 345 357 CCT7 T-complex protein 1 subunit eta yes yes 2 0.0092811 59.426 By MS/MS 1 666430 0 666430 0 341 1768 366 1168 871 871 0 CRSPGMLEPLGSSR MSPTPLDRCRSPGMLE LEPLGSSRTPMSVLQQ R C R S R T 0 2 0 0 1 0 1 2 0 0 2 0 1 0 2 3 0 0 0 0 0 0 14 1 1545.7392 Q9UQ35 Q9UQ35 2130 2143 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.004672 58.712 By MS/MS By MS/MS By MS/MS 2 2 3 12573000 4065700 4138300 4368500 342 1945 367;368 1169;1170;1171;1172;1173;1174;1175 872;873;874;875;876 874 175 2754 4 CSATPSAQVKPIVSASPPSR VIEMSSSRCSATPSAQ VSASPPSRAVAGSRSS R C S S R A 3 1 0 0 1 1 0 0 0 1 0 1 0 0 4 5 1 0 0 2 0 0 20 1 2039.047 H0Y3K4;Q96EV2 H0Y3K4 498 517 RBM33 RNA-binding protein 33 yes no 3 0.0019962 64.768 By MS/MS By MS/MS By MS/MS 1 1 1 3495200 1421800 1196600 876720 343 747 369 1176;1177;1178 877;878;879;880 880 1021;1022;1023 4 CSGPGLSPGMVR VTDASKVKCSGPGLSP GLSPGMVRANLPQSFQ K C S V R A 0 1 0 0 1 0 0 3 0 0 1 0 1 0 2 2 0 0 0 1 0 0 12 0 1216.5693 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 1453 1464 FLNA Filamin-A yes no 2 2.6161E-08 124.47 By MS/MS By matching By MS/MS 2 2 2 20225000 6371100 6633800 7219800 344 1182 370;371 1179;1180;1181;1182;1183;1184 881;882;883;884 881 112 1533 2 CSSAFFEEER RLMGKPRRCSSAFFEE SAFFEEERSALKQKRQ R C S E R S 1 1 0 0 1 0 3 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 10 0 1260.5081 C9J5J4;H7C4T7;H0Y322;Q5TKA1 C9J5J4 157 166 LIN9 Protein lin-9 homolog yes no 2 0.0078677 64.439 By matching By MS/MS 1 1 585490 319340 266150 0 345 414 372 1185;1186 885 885 551 1 CSTGSPSKDVTK FTSLYKDRCSTGSPSK SPSKDVTKSSSSGARE R C S T K S 0 0 0 1 1 0 0 1 0 0 0 2 0 0 1 3 2 0 0 1 0 0 12 1 1265.5922 H0Y2V6;Q5SW79 H0Y2V6 931 942 CEP170 Centrosomal protein of 170 kDa yes no 2 5.1383E-13 109.6 By MS/MS 1 0 0 0 0 346 743 373 1187 886 886 1009 1 CSVSLSNVEAR YRRQNPSRCSVSLSNV SLSNVEARRFFNKEFL R C S A R R 1 1 1 0 1 0 1 0 0 0 1 0 0 0 0 3 0 0 0 2 0 0 11 0 1220.5819 P47712 P47712 726 736 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 2 0.0030886 72.34 By matching By MS/MS By MS/MS 1 1 1 2834500 1379700 358660 1096100 347 1247 374 1188;1189;1190 887;888 887 1631;1632 2 CTLPEHESPSQDISDACEAESTER PKSEDADRCTLPEHES CEAESTERCEMSEHPS R C T E R C 2 1 0 2 2 1 5 0 1 1 1 0 0 0 2 4 2 0 0 0 0 0 24 0 2747.1287 Q32MZ4 Q32MZ4 726 749 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 3 0.0089174 41.904 By matching By matching By MS/MS 1 1 1 4378800 1805100 1455400 1118300 348 1465 375 1191;1192;1193 889 889 1964 1 CVSVQTDPTDEIPTKK KEGSRKSRCVSVQTDP TDEIPTKKSKKHKKHK R C V K K S 0 0 0 2 1 1 1 0 0 1 0 2 0 0 2 1 3 0 0 2 0 0 16 1 1816.8877 P18583 P18583 92 107 SON Protein SON yes yes 2;3 0.0020258 54.237 By MS/MS By MS/MS By MS/MS 2 2 2 7709100 3188400 2494400 2026300 349 1170 376 1194;1195;1196;1197;1198;1199 890;891;892 892 1516;3298 3 CYGGSFAQR EANLVPPKCYGGSFAQ YGGSFAQRNLCNDDGG K C Y Q R N 1 1 0 0 1 1 0 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 9 0 1044.4447 P42684 P42684 717 725 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0059003 73.665 By MS/MS 1 0 0 0 0 350 1238 377 1200 893 893 3786 1 CYLVSNGDYYLSAEILSK RHLEKMKKCYLVSNGD LSAEILSKFKLLDGSQ K C Y S K F 1 0 1 1 1 0 1 1 0 1 3 1 0 0 0 3 0 0 3 1 0 0 18 0 2093.998 G3V112;A0A087WV61;Q8NE09 G3V112 278 295 RGS22 Regulator of G-protein signaling 22 yes no 3 0.011858 44.005 By matching By MS/MS 1 1 11058000 0 414700 10644000 351 46 378 1201;1202 894 894 65;66;3574 1 DAFLGSFLYEYSR CKNYQEAKDAFLGSFL SFLYEYSRRHPEYAVS K D A S R R 1 1 0 1 0 0 1 1 0 0 2 0 0 2 0 2 0 0 2 0 0 0 13 0 1566.7355 CON__P02769 CON__P02769 347 359 yes yes 2 1.0623E-15 133.42 By matching By MS/MS By MS/MS 1 1 1 9306300 4655900 2414800 2235500 + 352 468 379 1203;1204;1205 895;896 895 2 DAGGPRPESPVPAGR ________________ ESPVPAGRASLEEPPD R D A G R A 2 2 0 1 0 0 1 3 0 0 0 0 0 0 4 1 0 0 0 1 0 0 15 1 1461.7324 E9PS47;E9PLE4;Q9BVG9 E9PS47 8 22 PTDSS2 Phosphatidylserine synthase 2 yes no 2;3 0.00074179 72.421 By MS/MS By MS/MS By MS/MS 2 2 2 22273000 7467700 7057600 7747900 353 604 380 1206;1207;1208;1209;1210;1211 897;898;899 899 811 3 DAGTIAGLNVLR AYLGKATKDAGTIAGL IAGLNVLRIINEPTAA K D A L R I 2 1 1 1 0 0 0 2 0 1 2 0 0 0 0 0 1 0 0 1 0 0 12 0 1198.667 E9PKE3;P11142;E9PN89;E9PI65;E9PQQ4;E9PQK7;E9PK54;E9PLF4 E9PKE3 141 152 HSPA8 Heat shock cognate 71 kDa protein yes no 2 1.8905E-05 108.98 By MS/MS By MS/MS By matching 1 1 1 2739400 746350 1645400 347660 354 598 381 1212;1213;1214 900;901 901 2 DALGDSLQVPVSPSSTTSSR GHSPSQPRDALGDSLQ PSSTTSSRCSSRDGEF R D A S R C 1 1 0 2 0 1 0 1 0 0 2 0 0 0 2 6 2 0 0 2 0 0 20 0 2002.9807 Q9Y2D5;C9JVY5 Q9Y2D5 141 160 AKAP2 A-kinase anchor protein 2 yes no 2 0.00030967 76.713 By MS/MS By MS/MS By MS/MS 1 1 1 12727000 5573200 3320200 3833400 355 1953 382 1215;1216;1217 902;903;904 902 2786;2787 3 DAPISPASIASSSSTPSSK DKTRLLKKDAPISPAS SSSTPSSKSKELSLKR K D A S K S 3 0 0 1 0 0 0 0 0 2 0 1 0 0 3 8 1 0 0 0 0 0 19 0 1788.8741 H0Y5S0;H7C4E4;Q04727 H0Y5S0 21 39 TLE4 Transducin-like enhancer protein 4 yes no 2 0.014059 45.876 By matching By matching By MS/MS 1 1 1 6998200 2395000 2588200 2015000 356 760 383 1218;1219;1220 905 905 1040 1 DAPTSPASVASSSSTPSSK DKARSLKKDAPTSPAS SSSTPSSKTKDLGHND K D A S K T 3 0 0 1 0 0 0 0 0 0 0 1 0 0 3 8 2 0 0 1 0 0 19 0 1762.8221 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 282 300 TLE3 Transducin-like enhancer protein 3 yes no 2 6.5367E-05 79.332 By MS/MS By matching By MS/MS 1 1 1 20421000 7369500 7032500 6018800 357 659 384 1221;1222;1223 906;907 906 881 2 DASGVTFTWTPSSGK TCTLTGLRDASGVTFT TWTPSSGKSAVQGPPE R D A G K S 1 0 0 1 0 0 0 2 0 0 0 1 0 1 1 3 3 1 0 1 0 0 15 0 1539.7205 P01876 P01876 154 168 IGHA1 Ig alpha-1 chain C region yes yes 2 4.037E-11 105.2 By MS/MS By matching By matching 1 1 1 2235200 1308500 445250 481460 358 1091 385 1224;1225;1226 908 908 1 DASIVGFFDDSFSEAHSEFLK FKKFISDKDASIVGFF EAHSEFLKAASNLRDN K D A L K A 2 0 0 3 0 0 2 1 1 1 1 1 0 4 0 4 0 0 0 1 0 0 21 0 2347.0645 P30101 P30101 153 173 PDIA3 Protein disulfide-isomerase A3 yes yes 3 4.4037E-61 148.26 By MS/MS By matching By MS/MS 1 1 1 12705000 4928500 4048500 3728100 359 1208 386 1227;1228;1229 909;910 910 2 DASSSPASTASSASSTSLK DKNRLLKKDASSSPAS SASSTSLKSKEMSLHE K D A L K S 4 0 0 1 0 0 0 0 0 0 1 1 0 0 1 9 2 0 0 0 0 0 19 0 1740.8014 Q04724 Q04724 282 300 TLE1 Transducin-like enhancer protein 1 yes yes 2 0.002445 61.815 By matching By MS/MS By matching 1 1 1 6176300 2312200 1753500 2110700 360 1341 387 1230;1231;1232 911 911 1758 1 DATNVGDEGGFAPNILENK VIKEKYGKDATNVGDE APNILENKEGLELLKT K D A N K E 2 0 3 2 0 0 2 3 0 1 1 1 0 1 1 0 1 0 0 1 0 0 19 0 1959.9174 P06733 P06733 203 221 ENO1 Alpha-enolase yes yes 2;3 0.01065 64.313 By MS/MS By matching By matching 2 1 1 20481000 8201000 7114200 5165600 361 1113 388 1233;1234;1235;1236 912;913 913 2 DDDDIDLFGSDDEEESEEAKR GSGATDSKDDDDIDLF EESEEAKRLREERL__ K D D K R L 1 1 0 7 0 0 5 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 21 1 2427.9674 C9JZW3;P24534 C9JZW3 97 117 EEF1B2 Elongation factor 1-beta yes no 2 0.006572 53.779 By matching By MS/MS By matching 1 1 1 7172000 2056600 2773200 2342200 362 460 389 1237;1238;1239 914 914 609 1 DDGSWEVIEGYR SLSFPIRRDDGSWEVI WEVIEGYRAQHSQHRT R D D Y R A 0 1 0 2 0 0 2 2 0 1 0 0 0 0 0 1 0 1 1 1 0 0 12 0 1424.6208 P49448;P00367 P49448 125 136 GLUD2;GLUD1 Glutamate dehydrogenase 2, mitochondrial;Glutamate dehydrogenase 1, mitochondrial yes no 2 0.0087785 68.893 By MS/MS By matching By matching 1 1 1 906800 384770 200790 321240 363 1079 390 1240;1241;1242 915 915 1 DDKHGSYEDAVHSGALND IKLHPESKDDKHGSYE VHSGALND________ K D D N D - 2 0 1 4 0 0 1 2 2 0 1 1 0 0 0 2 0 0 1 1 0 0 18 1 1928.8137 F5H282;E7EQR6;P17987 F5H282 315 332 TCP1 T-complex protein 1 subunit alpha yes no 3 0.0013331 71.354 By MS/MS By matching By MS/MS 1 1 1 7483600 3054700 2470600 1958200 364 531 391 1243;1244;1245 916;917 917 681 2 DDQSIQKSVETIK FKLFKNFKDDQSIQKS QKSVETIKEDMNVKFF K D D I K E 0 0 0 2 0 2 1 0 0 2 0 2 0 0 0 2 1 0 0 1 0 0 13 1 1489.7624 P01579 P01579 85 97 IFNG Interferon gamma yes yes 2 0.0085103 49.189 By MS/MS 1 827440 827440 0 0 365 1088 392 1246 918 918 1450 1 DDSHSAEDSEDEKEDHK DKDVKTKKDDSHSAED EDEKEDHKNVRQQRQA K D D H K N 1 0 0 5 0 0 4 0 2 0 0 2 0 0 0 3 0 0 0 0 0 0 17 1 1971.7566 Q9H1E3 Q9H1E3 71 87 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0013232 61.757 By MS/MS By MS/MS 1 1 8280700 0 4815300 3465400 366 1813 393 1247;1248 919;920 919 2533 2 DDVSISVEEGKENILHVSENVIFTDVNSILR LLAVEHVKDDVSISVE TDVNSILRYLARVATT K D D L R Y 0 1 3 3 0 0 4 1 1 4 2 1 0 1 0 4 1 0 0 5 0 0 31 1 3469.7577 V9GYZ6;P07814;V9GZ76 V9GYZ6 26 56 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 4 0.00060296 44.844 By MS/MS 1 3800200 0 3800200 0 367 1121 394 1249 921 921 1 DEILPTTPISEQK HVSIVEPKDEILPTTP TTPISEQKGGKPEPPA K D E Q K G 0 0 0 1 0 1 2 0 0 2 1 1 0 0 2 1 2 0 0 0 0 0 13 0 1469.7613 P23396;E9PPU1;H0YEU2;E9PL09;E9PSF4 P23396 215 227 RPS3 40S ribosomal protein S3 yes no 2 1.2815E-279 214.61 By MS/MS By MS/MS By MS/MS 1 1 1 113010000 41785000 32583000 38637000 368 1191 395 1250;1251;1252 922;923;924 922 3301 3 DELILEGNDIELVSNSAALIQQATTVK RPVSQAQKDELILEGN IQQATTVKNKDIRKFL K D E V K N 3 0 2 2 0 2 3 1 0 3 4 1 0 0 0 2 2 0 0 2 0 0 27 0 2883.5077 D6RAN4;H0Y9V9;P32969;H0Y9R4 D6RAN4 137 163 RPL9 60S ribosomal protein L9 yes no 3 1.3135E-22 93.179 By matching By MS/MS By MS/MS 1 1 1 31443000 11379000 7772800 12291000 369 485 396 1253;1254;1255 925;926 926 2 DETNYGIPQR IIMWKLTRDETNYGIP TNYGIPQRALRGHSHF R D E Q R A 0 1 1 1 0 1 1 1 0 1 0 0 0 0 1 0 1 0 1 0 0 0 10 0 1191.552 D6RAU2;E9PD14;D6RFX4;D6RFZ9;D6RHH4;D6R9Z1;D6R9L0;P63244;D6RGK8;D6R909;D6RBD0;D6RAC2;D6REE5 D6RAU2 48 57 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.0028056 97.635 By MS/MS By MS/MS By matching 1 1 1 2780100 901660 1431600 446830 370 480 397 1256;1257;1258 927;928 928 2 DFADIPNLR KIKKLTAKDFADIPNL FADIPNLRRLDFTGNL K D F L R R 1 1 1 2 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 9 0 1059.5349 P20774;Q5TBF5 P20774 138 146 OGN Mimecan yes no 2 0.0058179 86.794 By matching By MS/MS 1 1 880770 603990 0 276780 371 1181 398 1259;1260 929 929 1 DFDSSEDEKHSK KKRIPNTKDFDSSEDE SEDEKHSKKGMDNQGH K D F S K K 0 0 0 3 0 0 2 0 1 0 0 2 0 1 0 3 0 0 0 0 0 0 12 1 1422.5899 P46100;A0A096LNW1;A0A096LNL9 P46100 846 857 ATRX Transcriptional regulator ATRX yes no 2 0.015422 50.04 By MS/MS By matching 1 1 922130 414190 507940 0 372 1243 399 1261;1262 930 930 1616;1617;1618 0 DFQEYVEPGEDFPASPQR NVLLLVIRDFQEYVEP DFPASPQRRNTASQED R D F Q R R 1 1 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 18 0 2109.928 E9PHI6;Q9Y6G9;C9JGM7 E9PHI6 77 94 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 0.014778 45.357 By MS/MS By matching By matching 1 1 1 3616000 1156200 1305100 1154700 373 584 400 1263;1264;1265 931 931 771 1 DFQEYVEPGEDFPASPQRR NVLLLVIRDFQEYVEP FPASPQRRNTASQEDK R D F R R N 1 2 0 2 0 2 3 1 0 0 0 0 0 2 3 1 0 0 1 1 0 0 19 1 2266.0291 E9PHI6;Q9Y6G9;C9JGM7 E9PHI6 77 95 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 3 0.0072151 56.817 By matching By MS/MS By MS/MS 1 1 1 16694000 7444100 3720200 5529800 374 584 401 1266;1267;1268 932;933 932 771 2 DGADFAKWR ERCAQYKKDGADFAKW GADFAKWRCVLKIGEH K D G W R C 2 1 0 2 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 9 1 1064.5039 J3KPS3;P04075;H3BUH7;H3BQN4;H3BPS8;H3BMQ8;H3BR04;H3BU78;K7EKH5;C9J8F3;J3KSV6;J3QKP5;A8MVZ9;P09972 J3KPS3 141 149 ALDOA;ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase C yes no 2 0.0096404 87.696 By matching By MS/MS By matching 1 1 1 4866700 2108100 1228600 1530000 375 908 402 1269;1270;1271 934 934 1 DGAGFLINLIDSPGHVDFSSEVTAALR LNFIKQSKDGAGFLIN SEVTAALRVTDGALVV K D G L R V 3 1 1 3 0 0 1 3 1 2 3 0 0 2 1 3 1 0 0 2 0 0 27 0 2800.4032 P13639 P13639 94 120 EEF2 Elongation factor 2 yes yes 3 0.00035176 52.359 By matching By matching By MS/MS 1 1 1 15833000 7366800 2993700 5472400 376 1154 403 1272;1273;1274 935 935 1 DGDDVIIIGVFK KQVQEFLKDGDDVIII VIIIGVFKGESDPAYQ K D G F K G 0 0 0 3 0 0 0 2 0 3 0 1 0 1 0 0 0 0 0 2 0 0 12 0 1289.6867 P13667 P13667 302 313 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.018435 56.013 By matching By MS/MS 1 1 1044100 0 367800 676280 377 1155 404 1275;1276 936 936 1 DGEEYEWKETAR EMDELCYRDGEEYEWK YEWKETARWLKFEEDV R D G A R W 1 1 0 1 0 0 4 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 12 1 1511.6529 C9JRP1;A0A0A0MST8;E9PFN4;Q9Y6M7 C9JRP1 123 134 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 yes no 2 0.0016384 80.24 By MS/MS By matching 1 1 3360000 1659300 1700700 0 378 156 405 1277;1278 937 937 3591 1 DGEQSPNVSLMQR RPESERERDGEQSPNV PNVSLMQRMSDMLSRW R D G Q R M 0 1 1 1 0 2 1 1 0 0 1 0 1 0 1 2 0 0 0 1 0 0 13 0 1459.6725 F2Z305;Q58WW2 F2Z305 332 344 DCAF6 DDB1- and CUL4-associated factor 6 yes no 2 0.00028569 84.17 By matching By MS/MS By MS/MS 1 1 1 5943800 1814000 2419900 1709900 379 629 406 1279;1280;1281 938;939 939 851 2 DGGQTESNEEGKENR KKGVSGQKDGGQTESN NEEGKENRDRDRDYSR K D G N R D 0 1 2 1 0 1 4 3 0 0 0 1 0 0 0 1 1 0 0 0 0 0 15 1 1648.6925 Q14157;F8W726;Q5VU81;Q5VU80;Q5VU79;Q5VU78;Q5VU77 Q14157 110 124 UBAP2L Ubiquitin-associated protein 2-like yes no 3 0.010935 58.626 By matching By matching By MS/MS 1 1 1 1740300 587010 712790 440480 380 1405 407 1282;1283;1284 940 940 1 DGKFSPIQEK ENMVVPSRDGKFSPIQ KFSPIQEKSPKQALSS R D G E K S 0 0 0 1 0 1 1 1 0 1 0 2 0 1 1 1 0 0 0 0 0 0 10 1 1147.5873 O43683 O43683 651 660 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes yes 2 0.0020592 92.781 By matching By MS/MS By MS/MS 1 1 1 3300800 1278700 1200300 821820 381 1013 408 1285;1286;1287 941;942 942 1352 2 DGLNQTTIPVSPPSTTKPSR IEDSSVQKDGLNQTTI PSTTKPSREPRKLSYA K D G S R E 0 1 1 1 0 1 0 1 0 1 1 1 0 0 4 3 4 0 0 1 0 0 20 1 2095.0909 X6RLN4;Q71RC2 X6RLN4 360 379 LARP4 La-related protein 4 yes no 3 0.0013154 70.413 By MS/MS By matching By MS/MS 1 1 1 4685200 2187500 1431500 1066200 382 1569 409 1288;1289;1290 943;944 944 2129 2 DGQDAIAQSPEKESK DSEASKPKDGQDAIAQ QSPEKESKDYEMNANH K D G S K D 2 0 0 2 0 2 2 1 0 1 0 2 0 0 1 2 0 0 0 0 0 0 15 1 1601.7533 Q9NWH9;H0YL55;H7BXE3 Q9NWH9 281 295 SLTM SAFB-like transcription modulator yes no 2;3 3.643E-18 121.03 By MS/MS By MS/MS By MS/MS 2 1 2 10033000 3037200 3515300 3480100 383 1868 410 1291;1292;1293;1294;1295 945;946;947;948 948 2636 4 DGQVINETSQHHDDLE LIKTVETRDGQVINET SQHHDDLE________ R D G L E - 0 0 1 3 0 2 2 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 16 0 1835.7922 P08670 P08670 451 466 VIM Vimentin yes yes 2;3 0.00066921 68.972 By MS/MS By MS/MS By MS/MS 2 2 2 26820000 9974500 10306000 6538800 384 1129 411 1296;1297;1298;1299;1300;1301 949;950;951;952 952 4 DGSFSVVITGLR ILLNPQDKDGSFSVVI SVVITGLRKEDAGRYL K D G L R K 0 1 0 1 0 0 0 2 0 1 1 0 0 1 0 2 1 0 0 2 0 0 12 0 1249.6667 P01833 P01833 305 316 PIGR Polymeric immunoglobulin receptor;Secretory component yes yes 2 0.012947 61.353 By matching By MS/MS By matching 1 1 1 3959500 1588200 1226800 1144500 385 1089 412 1302;1303;1304 953 953 1 DGSSPPLLEK KTAVQDRKDGSSPPLL SSPPLLEKQTVTKDVT K D G E K Q 0 0 0 1 0 0 1 1 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 0 1041.5342 H7BYY2;Q6W2J9 H7BYY2 420 429 BCOR BCL-6 corepressor yes no 2 0.0040538 73.666 By MS/MS By MS/MS By MS/MS 1 2 1 6326300 1938800 2603700 1783700 386 857 413 1305;1306;1307;1308 954;955;956 956 1157;1158 3 DGVNKDYEETELISTTANYR RDRAKERRDGVNKDYE ISTTANYRAVGPTA__ R D G Y R A 1 1 2 2 0 0 3 1 0 1 1 1 0 0 0 1 3 0 2 1 0 0 20 1 2317.071 D6RAY9;D6REL4;E7EQZ7;Q13123 D6RAY9 115 134 IK Protein Red yes no 3 0.016862 43.164 By matching By matching By MS/MS 1 1 1 3561300 1607500 893640 1060100 387 488 414 1309;1310;1311 957 957 3661 1 DGWHSWPIAHQWPQGPSAVDAAFSWEEK YWRLDTSRDGWHSWPI AAFSWEEKLYLVQGTQ R D G E K L 4 0 0 2 0 2 2 2 2 1 0 1 0 1 3 3 0 4 0 1 0 0 28 0 3218.4635 P02790 P02790 290 317 HPX Hemopexin yes yes 4 2.0285E-27 90.836 By MS/MS By MS/MS By MS/MS 1 1 1 11085000 5342600 2668100 3074700 388 1098 415 1312;1313;1314 958;959;960;961 958 4 DHANYEEDENGDITPIKAK GKKFARKRDHANYEED DITPIKAKKMFLKPQD R D H A K K 2 0 2 3 0 0 3 1 1 2 0 2 0 0 1 0 1 0 1 0 0 0 19 1 2157.9815 H3BSB3;H3BNT4;Q99547 H3BSB3 105 123 MPHOSPH6 M-phase phosphoprotein 6 yes no 3 0.0095367 60.735 By MS/MS By matching By matching 1 1 1 4928300 1980400 1787200 1160700 389 824 416 1315;1316;1317 962 962 3183 1 DHFGRTFYNQAIMSSKNIAQ QADVFPDRDHFGRTFY MSSKNIAQ________ R D H A Q - 2 1 2 1 0 2 0 1 1 2 0 1 1 2 0 2 1 0 1 0 0 0 20 2 2327.1117 A0A0G2JM88 A0A0G2JM88 189 208 yes yes 3 0.0075405 45.384 By matching By matching By MS/MS 1 1 1 2596000 1046900 894490 654590 390 224 417 1318;1319;1320 963 963 16 3601 1 DHSHAPPSTRPAR D H A R 2 2 0 1 0 0 0 0 2 0 0 0 0 0 3 2 1 0 0 0 0 0 13 1 1427.7018 REV__H7C457 yes no 3 0.0097534 53.3 By matching By MS/MS By matching 1 2 1 370170000 172440 369870000 125140 + 391 1998 418 1321;1322;1323;1324 964 964 2851 1 DHSPTPSVFNSDEER TRERERERDHSPTPSV VFNSDEERYRYREYAE R D H E R Y 0 1 1 2 0 0 2 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 15 0 1715.7387 Q6UN15 Q6UN15 490 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 2;3 1.8178E-07 90.229 By MS/MS By MS/MS By MS/MS 2 2 2 26845000 9097900 10379000 7367600 392 1558 419 1325;1326;1327;1328;1329;1330 965;966;967;968;969;970 970 2115;2116;3433 6 DHTVSGDEDYCPR YRFNHHCKDHTVSGDE GDEDYCPRSKKANLGK K D H P R S 0 1 0 3 1 0 1 1 1 0 0 0 0 0 1 1 1 0 1 1 0 0 13 0 1549.6103 Q9UIG0 Q9UIG0 943 955 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.00016345 86.262 By MS/MS By MS/MS By matching 1 1 1 4244600 1670000 1531100 1043500 393 1907 420 1331;1332;1333 971;972 971 2687 2 DIDEVSSLLR CCSAKNLRDIDEVSSL DEVSSLLRTSIMSKQY R D I L R T 0 1 0 2 0 0 1 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 10 0 1145.5928 P50990;H7C4C8 P50990 156 165 CCT8 T-complex protein 1 subunit theta yes no 2 0.008087 70.256 By MS/MS By matching 1 1 803390 295370 508020 0 394 1272 421 1334;1335 973 973 1 DIDISSPEFK VTGREGAKDIDISSPE DISSPEFKIKIPRHEL K D I F K I 0 0 0 2 0 0 1 0 0 2 0 1 0 1 1 2 0 0 0 0 0 0 10 0 1149.5554 Q09666 Q09666 172 181 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.0024253 80.834 By MS/MS By MS/MS By MS/MS 1 1 1 3202300 1035100 1124600 1042600 395 1359 422 1336;1337;1338 974;975;976 975 1784;1785 3 DIEQVPQQPTYVQALFDFDPQEDGELGFR RNQQIFLRDIEQVPQQ EDGELGFRRGDFIHVM R D I F R R 1 1 0 4 0 5 3 2 0 1 2 0 0 3 3 0 1 0 1 2 0 0 29 0 3380.5837 P62993 P62993 150 178 GRB2 Growth factor receptor-bound protein 2 yes yes 3 0.00020566 51.16 By matching By MS/MS By MS/MS 1 1 1 78406000 39795000 17923000 20687000 396 1316 423 1339;1340;1341 977;978 978 2 DIEVLSEDTDYEEDEVTKK KSPERLRKDIEVLSED EEDEVTKKRKDVKKDT K D I K K R 0 0 0 4 0 0 5 0 0 1 1 2 0 0 0 1 2 0 1 2 0 0 19 1 2256.0169 H0Y7Y8;H7C5R6;Q4LE39 H0Y7Y8 185 203 ARID4B AT-rich interactive domain-containing protein 4B yes no 2 0.011302 52.522 By MS/MS By matching 1 1 2262300 1238400 0 1023900 397 768 424 1342;1343 979 979 1049 1 DIGSESTEDQAMEDIK EKVNELSKDIGSESTE DQAMEDIKQMEAESIS K D I I K Q 1 0 0 3 0 1 3 1 0 2 0 1 1 0 0 2 1 0 0 0 0 0 16 0 1766.7516 CON__P02662 CON__P02662 43 58 yes yes 2 0.0043031 47.537 By matching By MS/MS By matching 1 1 1 1781000 705750 503220 572020 + 398 466 425 1344;1345;1346 980 980 33 612;613;3031 1 DIIRQPSEEEIIK IPSAKKYKDIIRQPSE PSEEEIIKLAPPPKKA K D I I K L 0 1 0 1 0 1 3 0 0 4 0 1 0 0 1 1 0 0 0 0 0 0 13 1 1568.841 B1AKZ5;Q15121 B1AKZ5 88 100 PEA15 Astrocytic phosphoprotein PEA-15 yes no 2 7.6304E-05 100.45 By MS/MS By MS/MS 1 1 35921000 0 22272000 13649000 399 328 426 1347;1348 981;982 982 455 2 DIISIAEDEDLR FDISLFYRDIISIAED IAEDEDLRVHFEESSK R D I L R V 1 1 0 3 0 0 2 0 0 3 1 0 0 0 0 1 0 0 0 0 0 0 12 0 1387.6831 B1AHC9;P12956 B1AHC9 169 180 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.0040145 75.652 By MS/MS By matching By matching 1 1 1 1006700 258490 404970 343280 400 324 427 1349;1350;1351 983 983 1 DILIVVGNEIIEAPMAWR GLYSAMPRDILIVVGN IEAPMAWRSRFFEYRA R D I W R S 2 1 1 1 0 0 2 1 0 4 1 0 1 0 1 0 0 1 0 2 0 0 18 0 2038.0921 H0YMX4;P50440 H0YMX4 97 114 GATM Glycine amidinotransferase, mitochondrial yes no 2;3 1.0972E-25 123.38 By MS/MS By MS/MS By MS/MS 3 4 4 158720000 50373000 46033000 62317000 401 807 428;429 1352;1353;1354;1355;1356;1357;1358;1359;1360;1361;1362 984;985;986;987;988;989;990;991 984 60 6 DINSLYDVSR LERYNMERDINSLYDV NSLYDVSRMYVDPSEI R D I S R M 0 1 1 2 0 0 0 0 0 1 1 0 0 0 0 2 0 0 1 1 0 0 10 0 1180.5724 A0A0A0MRF9;P16885 A0A0A0MRF9 748 757 PLCG2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 yes no 2 0.004132 72.928 By matching By MS/MS By MS/MS 1 1 1 3829100 1467300 1164700 1197100 402 132 430 1363;1364;1365 992;993 992 177 2 DISGPSPSKK FVCDINEKDISGPSPS SGPSPSKKLKKSQCTP K D I K K L 0 0 0 1 0 0 0 1 0 1 0 2 0 0 2 3 0 0 0 0 0 0 10 1 1014.5346 S4R3D6;Q96GX9 S4R3D6 35 44 APIP Methylthioribulose-1-phosphate dehydratase yes no 2 0.0028913 82.505 By MS/MS By MS/MS By MS/MS 1 1 1 5928400 1719800 2231400 1977100 403 1737 431 1366;1367;1368 994;995;996;997 996 2387 4 DITLFHAMDTLQRNGYDLAK MSAAAASRDITLFHAM RNGYDLAKAMSTLVPQ R D I A K A 2 1 1 3 0 1 0 1 1 1 3 1 1 1 0 0 2 0 1 0 0 0 20 1 2321.1474 O94776 O94776 228 247 MTA2 Metastasis-associated protein MTA2 yes yes 3 0.018432 40.179 By MS/MS 1 0 0 0 0 404 1048 432 1369 998 998 3263;3264;3755 1 DITTSADQIAEVK PGLELNKKDITTSADQ ADQIAEVKTMESHPPI K D I V K T 2 0 0 2 0 1 1 0 0 2 0 1 0 0 0 1 2 0 0 1 0 0 13 0 1389.6987 F5H527;Q76I76 F5H527 510 522 SSH2 Protein phosphatase Slingshot homolog 2 yes no 2 0.002562 82.417 By matching By matching By MS/MS 1 1 1 1420200 503000 451670 465550 405 652 433 1370;1371;1372 999 999 3118 1 DIYETDYYR IGDFGMTRDIYETDYY IYETDYYRKGGKGLLP R D I Y R K 0 1 0 2 0 0 1 0 0 1 0 0 0 0 0 0 1 0 3 0 0 0 9 0 1236.5299 C9J5X1;P08069;P06213 C9J5X1 1158 1166 IGF1R;INSR Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Insulin receptor;Insulin receptor subunit alpha;Insulin receptor subunit beta yes no 2 0.009991 69.825 By matching By MS/MS By matching 1 1 1 1831200 531200 642240 657760 406 416 434 1373;1374;1375 1000 1000 3643;3644 1 DKAPVQPQQSPAAAPGGTDEKPSGK ________________ TDEKPSGKERRDAGDK R D K G K E 4 0 0 2 0 3 1 3 0 0 0 3 0 0 5 2 1 0 0 1 0 0 25 2 2460.2245 F8WBS8;C9JPC0;Q13200 F8WBS8 7 31 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 4 0.0039172 48.232 By MS/MS By matching 1 1 1509900 851530 658390 0 407 442 435 1376;1377 1001 1001 581 1 DKEISPSVTK QDKEKPEKDKEISPSV EISPSVTKKNTNKKTK K D K T K K 0 0 0 1 0 0 1 0 0 1 0 2 0 0 1 2 1 0 0 1 0 0 10 1 1102.587 Q8N488 Q8N488 95 104 RYBP RING1 and YY1-binding protein yes yes 2 0.00015285 111.5 By matching By MS/MS By MS/MS 1 1 1 2786100 764220 1187100 834820 408 1632 436 1378;1379;1380 1002;1003 1002 2235;2236 2 DKEVSDDEAEEK TLFVEKERDKEVSDDE SDDEAEEKEDKEEEKE R D K E K E 1 0 0 3 0 0 4 0 0 0 0 2 0 0 0 1 0 0 0 1 0 0 12 1 1392.5892 P07900;G3V2J8 P07900 227 238 HSP90AA1 Heat shock protein HSP 90-alpha yes no 2 0.0070085 67.118 By MS/MS 1 0 0 0 0 409 1122 437 1381 1004 1004 1467 1 DKQNISQLEK NAVQMKQKDKQNISQL QNISQLEKKLKAEQEA K D K E K K 0 0 1 1 0 2 1 0 0 1 1 2 0 0 0 1 0 0 0 0 0 0 10 1 1201.6303 Q8N5G2 Q8N5G2 449 458 TMEM57 Macoilin yes yes 2 0.016759 62.14 By MS/MS By matching By matching 1 1 1 1755500 639910 636440 479160 410 1636 438 1382;1383;1384 1005 1005 2242 0 DKSDSPAIQLR REVLGIKRDKSDSPAI DSPAIQLRLKEPMDVD R D K L R L 1 1 0 2 0 1 0 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 11 1 1228.6412 Q96ST3 Q96ST3 936 946 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 2.4299E-05 123.95 By MS/MS By MS/MS By matching 1 1 1 2920400 966820 986910 966680 411 1760 439 1385;1386;1387 1006;1007 1006 2437 2 DKSPSSLLEDAK PALPRKQRDKSPSSLL SSLLEDAKETCFTRDR R D K A K E 1 0 0 2 0 0 1 0 0 0 2 2 0 0 1 3 0 0 0 0 0 0 12 1 1288.6511 P42684 P42684 629 640 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0058345 71.879 By MS/MS By MS/MS By MS/MS 1 1 1 4749000 1522200 1668900 1558000 412 1238 440 1388;1389;1390 1008;1009;1010 1008 1598 3 DKSPVREPIDNLTPEER RSKSPFRKDKSPVREP DNLTPEERDARTVFCM K D K E R D 0 2 1 2 0 0 3 0 0 1 1 1 0 0 3 1 1 0 0 1 0 0 17 2 1994.0069 Q5QP22;Q5QP23;G3XAC6;Q14498;H0Y4X3 Q5QP22 134 150 RBM39 RNA-binding protein 39 yes no 3 0.016378 52.569 By matching By MS/MS By matching 1 1 1 152240000 51069000 59214000 41959000 413 729 441 1391;1392;1393 1011 1011 983 1 DKVTIADDYSDPFDAK EESGAGKKDKVTIADD YSDPFDAKNDLKSKAG K D K A K N 2 0 0 5 0 0 0 0 0 1 0 2 0 1 1 1 1 0 1 1 0 0 16 1 1798.8261 Q15464 Q15464 238 253 SHB SH2 domain-containing adapter protein B yes yes 2;3 1.0098E-05 88.163 By MS/MS By matching By MS/MS 1 2 2 3000100 990180 985430 1024500 414 1441 442 1394;1395;1396;1397;1398 1012;1013 1012 1930;3849 2 DKVTYTLLRK GLLKPELKDKVTYTLL VTYTLLRKHRHQTKKS K D K R K H 0 1 0 1 0 0 0 0 0 0 2 2 0 0 0 0 2 0 1 1 0 0 10 2 1235.7238 Q9Y6R1 Q9Y6R1 202 211 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 yes yes 2 0.0047393 58.596 By MS/MS 1 0 0 0 0 415 1980 443 1399 1014 1014 3560;3561;3941 1 DLADELALVDVIEDK CAISILMKDLADELAL LVDVIEDKLKGEMMDL K D L D K L 2 0 0 4 0 0 2 0 0 1 3 1 0 0 0 0 0 0 0 2 0 0 15 0 1656.8458 P00338;F5GXH2;F5GYU2;F5GXY2;F5GZQ4;F5H5J4;F5H6W8 P00338 43 57 LDHA L-lactate dehydrogenase A chain yes no 2 8.3337E-07 91.914 By matching By MS/MS 1 1 3904400 2785300 0 1119100 416 1077 444 1400;1401 1015 1015 1 DLAVPAALTPR YHTVCTPRDLAVPAAL VPAALTPRASPGHSPH R D L P R A 3 1 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 0 1 0 0 11 0 1122.6397 Q8TEM1 Q8TEM1 1836 1846 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 2 4.9594E-05 128.57 By matching By MS/MS By MS/MS 1 1 1 8624600 3271800 3008300 2344600 417 1677 445 1402;1403;1404 1016;1017 1016 3468 2 DLDEEGSEKELHENVLDK FEENGLEKDLDEEGSE LHENVLDKELEENDSE K D L D K E 0 0 1 3 0 0 5 1 1 0 3 2 0 0 0 1 0 0 0 1 0 0 18 1 2097.9702 O43719 O43719 573 590 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.003528 57.142 By matching By MS/MS By MS/MS 1 1 1 11092000 3654300 4869500 2568500 418 1014 446 1405;1406;1407 1018;1019 1018 1353 2 DLDSQTMMVLVNYIFFK GKITDLIKDLDSQTMM LVNYIFFKAKWEMPFD K D L F K A 0 0 1 2 0 1 0 0 0 1 2 1 2 2 0 1 1 0 1 2 0 0 17 0 2063.0108 G3V595;P01011 G3V595 198 214 SERPINA3 Alpha-1-antichymotrypsin;Alpha-1-antichymotrypsin His-Pro-less yes no 2 1.4472E-97 167.84 By MS/MS By MS/MS 1 1 54375000 0 26745000 27630000 419 725 447 1408;1409 1020;1021 1021 52;53 2 DLEATKSKTMIFYAK SKRSAIFKDLEATKSK KTMIFYAKINELNEEL K D L A K I 2 0 0 1 0 0 1 0 0 1 1 3 1 1 0 1 2 0 1 0 0 0 15 2 1744.907 J3KSU3;F8W7A7;Q5BJE1 J3KSU3 200 214 CCDC178 Coiled-coil domain-containing protein 178 yes no 2 0.0095079 45.661 By matching By matching By MS/MS 1 1 1 1579000 583310 488750 506910 420 688 448 1410;1411;1412 1022 1022 3134;3694 0 DLEIEVVLFHPNYNINGK VSVGGEKRDLEIEVVL PNYNINGKKEAGIPEF R D L G K K 0 0 3 1 0 0 2 1 1 2 2 1 0 1 1 0 0 0 1 2 0 0 18 0 2113.0844 A0A0G2JH38;E7ETN3;B4E1Z4;P00751;H7C5H1 A0A0G2JH38 547 564 CFB Complement factor B;Complement factor B Ba fragment;Complement factor B Bb fragment yes no 2;3 8.7506E-29 132.08 By MS/MS By MS/MS By MS/MS 2 3 3 28171000 11834000 7861900 8475100 421 221 449;450 1413;1414;1415;1416;1417;1418;1419;1420 1023;1024;1025;1026;1027;1028;1029;1030 1029 15 8 DLEVVAATPTSLLISWDAPAVTVR STVSDVPRDLEVVAAT DAPAVTVRYYRITYGE R D L V R Y 4 1 0 2 0 0 1 0 0 1 3 0 0 0 2 2 3 1 0 4 0 0 24 0 2523.3585 P02751;H0Y7Z1 P02751 1453 1476 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 2;3 8.1066E-47 155.92 By MS/MS By MS/MS By MS/MS 2 2 2 192480000 53855000 54112000 84515000 422 1095 451 1421;1422;1423;1424;1425;1426 1031;1032;1033;1034;1035 1032 5 DLFAFQESPPR GEKRQVRRDLFAFQES AFQESPPRFLPSHPIV R D L P R F 1 1 0 1 0 1 1 0 0 0 1 0 0 2 2 1 0 0 0 0 0 0 11 0 1305.6354 E7EX48;P51957 E7EX48 467 477 NEK4 Serine/threonine-protein kinase Nek4 yes no 2 0.015708 54.023 By matching By matching By MS/MS 1 1 1 765410 267550 279920 217940 423 559 452 1427;1428;1429 1036 1036 746 1 DLFDYSPPLHK QVKSEKLKDLFDYSPP DYSPPLHKNLDAREKS K D L H K N 0 0 0 2 0 0 0 0 1 0 2 1 0 1 2 1 0 0 1 0 0 0 11 0 1330.6558 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 507 517 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 3.5567E-10 138.24 By MS/MS By MS/MS By MS/MS 1 1 1 13587000 5191500 3984000 4411300 424 596 453 1430;1431;1432 1037;1038;1039;1040;1041;1042 1040 793 6 DLFSLDSEDPSPASPPLR EQILRTGRDLFSLDSE SPASPPLRSSGSSLFP R D L L R S 1 1 0 3 0 0 1 0 0 0 3 0 0 1 4 4 0 0 0 0 0 0 18 0 1941.932 H3BTX0;Q9BTK6 H3BTX0 54 71 PAGR1 PAXIP1-associated glutamate-rich protein 1 yes no 2 0.001893 68.243 By MS/MS By MS/MS By MS/MS 1 1 1 22783000 8140300 7045600 7597100 425 849 454 1433;1434;1435 1043;1044;1045 1045 1141 3 DLIHDQDEDEEEEEGQR DNRVTSFRDLIHDQDE EEEEEGQRFYAGGSER R D L Q R F 0 1 0 4 0 2 6 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 17 0 2084.8407 F2Z2K0;Q9UNZ2;R4GNE6 F2Z2K0 77 93 NSFL1C NSFL1 cofactor p47 yes no 3 2.1148E-23 114.06 By MS/MS By MS/MS By MS/MS 1 1 1 3630700 1131400 1243100 1256300 426 622 455 1436;1437;1438 1046;1047;1048 1047 3 DLISLDSSPAKER SPNTPFRKDLISLDSS DSSPAKERLEDGCVHP K D L E R L 1 1 0 2 0 0 1 0 0 1 2 1 0 0 1 3 0 0 0 0 0 0 13 1 1429.7413 Q9UN79 Q9UN79 379 391 SOX13 Transcription factor SOX-13 yes yes 2 1.931E-05 103.97 By matching By MS/MS 1 1 696560 0 300040 396520 427 1936 456 1439;1440 1049 1049 2735 1 DLKPETEYVVNVYSVVEDEYSEPLKGTEK METSTVLKDLKPETEY EPLKGTEKTLPVPVVS K D L E K T 0 0 1 2 0 0 6 1 0 0 2 3 0 0 2 2 2 0 3 5 0 0 29 2 3358.6344 D6RGG3;Q99715;A0A087X0A8;H0Y4P7 D6RGG3 1443 1471 COL12A1 Collagen alpha-1(XII) chain yes no 4 0.018251 27.351 By matching By matching By MS/MS 1 1 1 4506900 1728000 1539500 1239400 428 497 457 1441;1442;1443 1050 1050 1 DLLIAYYDVDYEK NKDLIQGKDLLIAYYD YYDVDYEKNAKGSNYW K D L E K N 1 0 0 3 0 0 1 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 13 0 1618.7767 P30101 P30101 259 271 PDIA3 Protein disulfide-isomerase A3 yes yes 2 1.3952E-16 137.17 By MS/MS By MS/MS By MS/MS 2 2 2 22226000 8322500 5810500 8093200 429 1208 458 1444;1445;1446;1447;1448;1449 1051;1052;1053;1054;1055;1056;1057;1058 1052 8 DLLPRDPATWKNSR VLESLVGRDLLPRDPA PATWKNSRHLSKGVEA R D L S R H 1 2 1 2 0 0 0 0 0 0 2 1 0 0 2 1 1 1 0 0 0 0 14 2 1667.8744 F8VUJ9 F8VUJ9 49 62 DNM1L yes yes 3 0.005732 48.659 By MS/MS By matching By matching 1 1 1 8455500 4163300 2826200 1466000 430 672 459 1450;1451;1452 1059 1059 898;3127 1 DLLPSPAGPVPSKDPK KQSAAKEKDLLPSPAG PVPSKDPKTEHGSRKR K D L P K T 1 0 0 2 0 0 0 1 0 0 2 2 0 0 5 2 0 0 0 1 0 0 16 1 1616.8774 Q9UHB7 Q9UHB7 810 825 AFF4 AF4/FMR2 family member 4 yes yes 2 0.015674 45.54 By MS/MS By matching 1 1 804650 0 472610 332040 431 1905 460 1453;1454 1060 1060 2685 0 DLPDGHAASPR KPDFVQVKDLPDGHAA DGHAASPRGTEASPPQ K D L P R G 2 1 0 2 0 0 0 1 1 0 1 0 0 0 2 1 0 0 0 0 0 0 11 0 1134.5418 Q9P1Y5 Q9P1Y5 326 336 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 yes yes 2 0.0057266 67.997 By matching By MS/MS By matching 1 1 1 5446500 1863300 1860300 1722900 432 1887 461 1455;1456;1457 1061 1061 2662 1 DLPSADSVQYR LYHEHLRKDLPSADSV SADSVQYRHLPSRGIT K D L Y R H 1 1 0 2 0 1 0 0 0 0 1 0 0 0 1 2 0 0 1 1 0 0 11 0 1249.5939 Q92621 Q92621 572 582 NUP205 Nuclear pore complex protein Nup205 yes yes 2 0.00089124 91.265 By matching By MS/MS By matching 1 1 1 4071900 1476700 1327800 1267400 433 1701 462 1458;1459;1460 1062 1062 3885 1 DLQAICGISCDELSSMVLELR NYIGHKTKDLQAICGI SSMVLELRGLRTIVTT K D L L R G 1 1 0 2 2 1 2 1 0 2 4 0 1 0 0 3 0 0 0 1 0 0 21 0 2408.1386 P07996;CON__Q28194 P07996 265 285 THBS1 Thrombospondin-1 yes no 3 0.00086418 68.88 By MS/MS By MS/MS By MS/MS 1 1 1 8706000 5385700 1600400 1720000 + 434 1124 463 1461;1462;1463 1063;1064;1065;1066 1063 93 4 DLQFVEVTDVK SDTVPSPRDLQFVEVT FVEVTDVKVTIMWTPP R D L V K V 0 0 0 2 0 1 1 0 0 0 1 1 0 1 0 0 1 0 0 3 0 0 11 0 1291.666 P02751 P02751 912 922 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 1.568E-05 111.06 By matching By MS/MS By MS/MS 1 1 1 2421100 1054200 621040 745870 435 1095 464 1464;1465;1466 1067;1068 1067 2 DLQVSETAETSLTLLWK ATELDTPKDLQVSETA TSLTLLWKTPLAKFDR K D L W K T 1 0 0 1 0 1 2 0 0 0 4 1 0 0 0 2 3 1 0 1 0 0 17 0 1933.0044 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 990 1006 TNC Tenascin yes no 2;3 1.218E-46 146 By MS/MS By MS/MS By MS/MS 7 10 13 70220000 28064000 20529000 21627000 436 563 465 1467;1468;1469;1470;1471;1472;1473;1474;1475;1476;1477;1478;1479;1480;1481;1482;1483;1484;1485;1486;1487;1488;1489;1490;1491;1492;1493;1494;1495;1496 1069;1070;1071;1072;1073;1074;1075;1076;1077;1078;1079;1080;1081;1082;1083;1084;1085;1086;1087;1088;1089;1090;1091 1073 22 DLSDAIEQTFQR LENSELFKDLSDAIEQ AIEQTFQRRNSETKVR K D L Q R R 1 1 0 2 0 2 1 0 0 1 1 0 0 1 0 1 1 0 0 0 0 0 12 0 1421.6787 E9PEI0;Q69YH5 E9PEI0 857 868 CDCA2 Cell division cycle-associated protein 2 yes no 2 0.015581 43.308 By matching By MS/MS By matching 1 1 1 2345100 811540 801160 732420 437 567 466 1497;1498;1499 1092 1092 0 DLSLEEIQK PLSPPKKKDLSLEEIQ LSLEEIQKKLEAAEER K D L Q K K 0 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 0 0 0 0 0 0 9 0 1073.5605 A2A2D0;P16949;E5RGX5;Q93045 A2A2D0 44 52 STMN1;STMN2 Stathmin;Stathmin-2 yes no 2 0.0039571 82.831 By MS/MS By MS/MS By matching 1 1 1 4257900 1493000 1648200 1116700 438 293 467 1500;1501;1502 1093;1094 1094 388 2 DLSLEEIQKK PLSPPKKKDLSLEEIQ SLEEIQKKLEAAEERR K D L K K L 0 0 0 1 0 1 2 0 0 1 2 2 0 0 0 1 0 0 0 0 0 0 10 1 1201.6554 A2A2D0;P16949;E5RGX5;Q93045 A2A2D0 44 53 STMN1;STMN2 Stathmin;Stathmin-2 yes no 2 0.011796 65.232 By MS/MS By matching By matching 1 1 1 2678100 904320 958570 815200 439 293 468 1503;1504;1505 1095 1095 388 1 DLSQESSSTAPGSEVTIKQEPVSPK LTAEATGKDLSQESSS KQEPVSPKKKENALLR K D L P K K 1 0 0 1 0 2 3 1 0 1 1 2 0 0 3 6 2 0 0 2 0 0 25 1 2600.2817 E7EWM1;Q15596 E7EWM1 714 738 NCOA2 Nuclear receptor coactivator 2 yes no 3 0.0052922 53.059 By MS/MS By MS/MS By matching 1 1 1 5673500 2272200 1784700 1616600 440 555 469 1506;1507;1508 1096;1097 1097 738;3076 2 DLSQTQCQKKETEQMYQSK LILERVQRDLSQTQCQ TEQMYQSKLKKYIAKQ R D L S K L 0 0 0 1 1 5 2 0 0 0 1 3 1 0 0 2 2 0 1 0 0 0 19 2 2359.0784 Q8IYA2 Q8IYA2 819 837 CCDC144CP Putative coiled-coil domain-containing protein 144C yes yes 3 0.0043624 43.024 By matching By MS/MS By matching 1 1 1 2675000 937490 921600 815870 441 1618 470 1509;1510;1511 1098 1098 154 2218;3452 1 DLSSSSSLSSR WRSTSGSRDLSSSSSL SSSSLSSRLGADARDP R D L S R L 0 1 0 1 0 0 0 0 0 0 2 0 0 0 0 7 0 0 0 0 0 0 11 0 1124.5309 B4DYV8;Q8WZ75 B4DYV8 392 402 ROBO4 Roundabout homolog 4 yes no 3 0.016389 57.149 By matching By MS/MS By matching 1 1 1 1790100 741900 939410 108760 442 353 471 1512;1513;1514 1099 1099 482 0 DLTHSDSESSLHMSDR QHGLGSQRDLTHSDSE SSLHMSDRQRVAPKPP R D L D R Q 0 1 0 3 0 0 1 0 2 0 2 0 1 0 0 5 1 0 0 0 0 0 16 0 1815.7694 H0YDB2;E9PNJ4;Q13586 H0YDB2 277 292 STIM1 Stromal interaction molecule 1 yes no 3 0.00097417 66.674 By MS/MS By matching By matching 1 1 1 5707400 2114800 1748200 1844400 443 611 472 1515;1516;1517 1100 1100 828 1 DLTYQVVLGEYNLAVK TAGHCISRDLTYQVVL GEYNLAVKEGPEQVIP R D L V K E 1 0 1 1 0 1 1 1 0 0 3 1 0 0 0 0 1 0 2 3 0 0 16 0 1823.9669 B1AQ52;P09093 B1AQ52 78 93 CELA3A Chymotrypsin-like elastase family member 3A yes no 2 2.22E-17 115.14 By MS/MS By MS/MS By MS/MS 1 1 1 10390000 4273300 2529800 3587000 444 332 473 1518;1519;1520 1101;1102;1103 1101 3 DLVLPTQALPASPALK AFAKLDQKDLVLPTQA LPASPALKNKRPRKDE K D L L K N 3 0 0 1 0 1 0 0 0 0 4 1 0 0 3 1 1 0 0 1 0 0 16 0 1632.9451 J3KSZ6;U3KQ35;H3BR06;Q15554 J3KSZ6 98 113 TERF2 Telomeric repeat-binding factor 2 yes no 2 0.00097945 73.722 By matching By MS/MS By MS/MS 1 1 1 13611000 5781500 3401500 4428300 445 838 474 1521;1522;1523 1104;1105 1105 1127 2 DLVQPDKPASPK SGHLMQTRDLVQPDKP PDKPASPKFIVTLDGV R D L P K F 1 0 0 2 0 1 0 0 0 0 1 2 0 0 3 1 0 0 0 1 0 0 12 1 1293.6929 G3V411;H0YJA2;Q6PJT7;G3V4R5 G3V411 208 219 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 2;3 0.00028041 89.992 By MS/MS By MS/MS By MS/MS 2 2 2 37038000 11420000 13368000 12250000 446 719 475 1524;1525;1526;1527;1528;1529 1106;1107;1108;1109 1107 970 4 DLVVTEVTEETVNLAWDNEMR CSEVSPPKDLVVTEVT LAWDNEMRVTEYLVVY K D L M R V 1 1 2 2 0 0 4 0 0 0 2 0 1 0 0 0 3 1 0 4 0 0 21 0 2462.1635 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 628 648 TNC Tenascin yes no 2;3 1.1257E-07 83.729 By matching By MS/MS By matching 2 2 2 26570000 10375000 8397200 7798100 447 563 476 1530;1531;1532;1533;1534;1535 1110;1111 1110 42 2 DLYLASVFHATAFELDTDGNPFDQDIYGR LSRMSGKKDLYLASVF FDQDIYGREELRSPKL K D L G R E 3 1 1 5 0 1 1 2 1 1 3 0 0 3 1 1 2 0 2 1 0 0 29 0 3289.5204 P50454;E9PKH2 P50454 345 373 SERPINH1 Serpin H1 yes no 3 4.4991E-20 88.001 By matching By MS/MS By MS/MS 1 1 1 41345000 19337000 10284000 11724000 448 1269 477 1536;1537;1538 1112;1113 1113 2 DMAHQVQELFRTR VMVLAWDKDMAHQVQE VQELFRTRQVVKKYWA K D M T R Q 1 2 0 1 0 2 1 0 1 0 1 0 1 1 0 0 1 0 0 1 0 0 13 1 1629.8046 Q96CM3 Q96CM3 167 179 RPUSD4 RNA pseudouridylate synthase domain-containing protein 4 yes yes 2 0.015512 43.308 By MS/MS 1 0 0 0 0 449 1724 478 1539 1114 1114 3475 1 DMAIATGGAVFGEEGLTLNLEDVQPHDLGK DNRKNQLKDMAIATGG VQPHDLGKVGEVIVTK K D M G K V 3 0 1 3 0 1 3 5 1 1 4 1 1 1 1 0 2 0 0 2 0 0 30 0 3096.5074 P10809 P10809 315 344 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 4.6104E-14 82.086 By MS/MS By MS/MS 1 1 18240000 12821000 0 5419300 450 1140 479 1540;1541 1115;1116 1115 100 2 DMESPTKLDVTLAK KTEVALAKDMESPTKL KLDVTLAKDMQPSMES K D M A K D 1 0 0 2 0 0 1 0 0 0 2 2 1 0 1 1 2 0 0 1 0 0 14 1 1546.7913 E7EVA0;P27816;H7C456 E7EVA0 294 307 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 0.00010011 87.363 By MS/MS By MS/MS By matching 2 2 2 64798000 19182000 23043000 22573000 451 551 480 1542;1543;1544;1545;1546;1547 1117;1118;1119;1120 1117 726 4 DMQPLSPISVHER TDSGSLRRDMQPLSPI SPISVHERYSSPTAGS R D M E R Y 0 1 0 1 0 1 1 0 1 1 1 0 1 0 2 2 0 0 0 1 0 0 13 0 1507.7453 P28749 P28749 635 647 RBL1 Retinoblastoma-like protein 1 yes yes 2 0.012523 52.265 By matching By matching By MS/MS 1 1 1 3134100 903840 1172000 1058200 452 1202 481 1548;1549;1550 1121 1121 1552 1 DMSLYASLTSEK LSDVAPPRDMSLYASL YASLTSEKVQSLEGEK R D M E K V 1 0 0 1 0 0 1 0 0 0 2 1 1 0 0 3 1 0 1 0 0 0 12 0 1343.6279 P46821 P46821 1758 1769 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0011978 70.552 By MS/MS By matching 1 1 595900 459100 0 136800 453 1245 482 1551;1552 1122 1122 117 3791 1 DNCQYVYNVDQR GDGILNERDNCQYVYN YVYNVDQRDTDMDGVG R D N Q R D 0 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 12 0 1572.6627 P07996 P07996 811 822 THBS1 Thrombospondin-1 yes yes 2 0.0045866 73.9 By MS/MS 1 407000 407000 0 0 + 454 1124 483 1553 1123 1123 1 DNDAFSYGYVR ASVISKWRDNDAFSYG AFSYGYVRAEVLAGFV R D N V R A 1 1 1 2 0 0 0 1 0 0 0 0 0 1 0 1 0 0 2 1 0 0 11 0 1305.5626 Q8NEW0 Q8NEW0 92 102 SLC30A7 Zinc transporter 7 yes yes 2 0.01883 60.828 By matching By MS/MS By matching 1 1 1 9061500 2999900 2654600 3407100 455 1659 484 1554;1555;1556 1124 1124 2275;3879 1 DNEESEQPPVPGTPTLR DFGSLLKKDNEESEQP VPGTPTLRNRTFSESS K D N L R N 0 1 1 1 0 1 3 1 0 0 1 0 0 0 4 1 2 0 0 1 0 0 17 0 1864.8803 O15439 O15439 634 650 ABCC4 Multidrug resistance-associated protein 4 yes yes 2 3.6388E-10 94.673 By matching By MS/MS By matching 1 1 1 7475200 2654000 2807000 2014300 456 996 485 1557;1558;1559 1125 1125 3237 1 DNIQGITKPAIR KRHRKVLRDNIQGITK GITKPAIRRLARRGGV R D N I R R 1 1 1 1 0 1 0 1 0 3 0 1 0 0 1 0 1 0 0 0 0 0 12 1 1324.7463 P62805 P62805 25 36 HIST1H4A Histone H4 yes yes 2;3 0.00018966 92.247 By MS/MS By MS/MS By matching 2 2 2 10688000 3036100 6283100 1369000 457 1313 486 1560;1561;1562;1563;1564;1565 1126;1127;1128;1129 1126 4 DNPGVVTCLDEAR AMVSMVTKDNPGVVTC VTCLDEARHGFESGDF K D N A R H 1 1 1 2 1 0 1 1 0 0 1 0 0 0 1 0 1 0 0 2 0 0 13 0 1444.6616 Q5JRR9;Q5JRS0;P22314 Q5JRR9 227 239 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 0.0098398 65.241 By matching By MS/MS By matching 1 1 1 3184500 882810 1574800 726870 458 1186 487 1566;1567;1568 1130 1130 1 DNQESSDAELSSSEYIK PSSKKLKKDNQESSDA LSSSEYIKTDLDAMDI K D N I K T 1 0 1 2 0 1 3 0 0 1 1 1 0 0 0 5 0 0 1 0 0 0 17 0 1900.8174 Q96JM3 Q96JM3 622 638 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.007503 50.108 By MS/MS By MS/MS By matching 1 1 1 2862100 734100 1222400 905610 459 1743 488 1569;1570;1571 1131;1132 1132 2395;2396 2 DNQLSEVANK PLVLGFLRDNQLSEVA QLSEVANKFAKATGAT R D N N K F 1 0 2 1 0 1 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 10 0 1116.5411 A0A0A0MRM9;Q14978;S4R402;S4R341;S4R349 A0A0A0MRM9 23 32 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.012948 56.916 By MS/MS 1 8140400 0 8140400 0 460 137 489 1572 1133 1133 0 DNSPPPAFKPEPPK AASSDQLRDNSPPPAF AFKPEPPKAKTQNKEE R D N P K A 1 0 1 1 0 0 1 0 0 0 0 2 0 1 6 1 0 0 0 0 0 0 14 1 1519.7671 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1043 1056 TJP2 Tight junction protein ZO-2 yes no 2 0.011222 57.288 By matching By MS/MS By matching 1 1 1 3869600 1250800 1669600 949280 461 272 490 1573;1574;1575 1134 1134 361 1 DNTFFRESPVGR RERSPYKRDNTFFRES FRESPVGRKDSPHSRS R D N G R K 0 2 1 1 0 0 1 1 0 0 0 0 0 2 1 1 1 0 0 1 0 0 12 1 1423.6844 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8;F8VPY7;F8VWU8 F8WF16 78 89 PPHLN1 Periphilin-1 yes no 3 0.0022021 73.9 By MS/MS By MS/MS By MS/MS 1 1 1 13176000 4865200 4504500 3805800 462 377 491 1576;1577;1578 1135;1136;1137 1136 503 3 DNVTSNKIR D N I R 0 1 2 1 0 0 0 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 9 1 1045.5516 REV__Q6PH81 yes no 2 0.014512 77.744 By MS/MS By matching 2 1 3436900 2325700 1111200 0 + 463 1996 492 1579;1580;1581 1138 1138 2849 1 DPKYPVENLLNPDSPRR SSRGQKAKDPKYPVEN LNPDSPRRPWLGCPQD K D P R R P 0 2 2 2 0 0 1 0 0 0 2 1 0 0 4 1 0 0 1 1 0 0 17 2 2009.033 E9PQ18 E9PQ18 47 63 yes yes 2 0.010464 42.556 By MS/MS By matching 1 1 1123300 517910 0 605430 464 616 493 1582;1583 1139 1139 835;3680 1 DQDLFVQNCAALSSGAFWFR QKFSTFDRDQDLFVQN SSGAFWFRSCHFANLN R D Q F R S 3 1 1 2 1 2 0 1 0 0 2 0 0 3 0 2 0 1 0 1 0 0 20 0 2331.0743 K7ES70;P55083 K7ES70 216 235 MFAP4 Microfibril-associated glycoprotein 4 yes no 2;3 2.2486E-16 114.64 By matching By MS/MS By MS/MS 1 2 2 29536000 10888000 9036800 9611100 465 955 494 1584;1585;1586;1587;1588 1140;1141;1142 1142 3 DQEPKPSPEPAAVSR GGGELDKKDQEPKPSP PEPAAVSRGGGGEPGA K D Q S R G 2 1 0 1 0 1 2 0 0 0 0 1 0 0 4 2 0 0 0 1 0 0 15 1 1606.7951 Q9H7S9 Q9H7S9 246 260 ZNF703 Zinc finger protein 703 yes yes 2;3 4.213E-05 86.214 By MS/MS By MS/MS By MS/MS 2 2 2 27173000 9295100 11083000 6795100 466 1832 495 1589;1590;1591;1592;1593;1594 1143;1144;1145;1146 1146 2573 4 DQFNLIVFSTEATQWR ILDDLSPRDQFNLIVF STEATQWRPSLVPASA R D Q W R P 1 1 1 1 0 2 1 0 0 1 1 0 0 2 0 1 2 1 0 1 0 0 16 0 1953.9585 H7C0L5;B7ZKJ8;Q14624 H7C0L5 166 181 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 0.0032783 63.16 By MS/MS 1 808270 0 0 808270 467 382 496 1595 1147 1147 1 DQGSFTEVVSISNLGMAK ACQMKYEKDQGSFTEV ISNLGMAKTGPVVEDS K D Q A K T 1 0 1 1 0 1 1 2 0 1 1 1 1 1 0 3 1 0 0 2 0 0 18 0 1881.9142 P11717 P11717 837 854 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 2 0.017524 40.577 By MS/MS 1 0 0 0 0 468 1147 497 1596 1148 1148 1495;1496;1497;3291 1 DQMEGSPNSSESFEHIAR PPKPLMRRDQMEGSPN ESFEHIARSARDHAIS R D Q A R S 1 1 1 1 0 1 3 1 1 1 0 0 1 1 1 4 0 0 0 0 0 0 18 0 2019.8592 E7EPN9;Q9Y520 E7EPN9 776 793 PRRC2C Protein PRRC2C yes no 3 0.015047 40.798 By MS/MS By matching By matching 1 1 1 2062900 908400 716430 438040 469 526 498 1597;1598;1599 1149 1149 673 0 DQPEANAPVKKTTQLK KPAKGKGKDQPEANAP VKKTTQLKRRGEDDHT K D Q L K R 2 0 1 1 0 2 1 0 0 0 1 3 0 0 2 0 2 0 0 1 0 0 16 2 1766.9527 Q6Q759 Q6Q759 184 199 SPAG17 Sperm-associated antigen 17 yes yes 2 0.014827 43.628 By MS/MS 1 0 0 0 0 470 1555 499 1600 1150 1150 3431;3432 1 DQQNLPYGVTPASPSGHSQGR AGQLRQVRDQQNLPYG PSGHSQGRRGASGSIF R D Q G R R 1 1 1 1 0 3 0 3 1 0 1 0 0 0 3 3 1 0 1 1 0 0 21 0 2195.0356 E7ETY4;E9PC69;Q7KZI7 E7ETY4 527 547 MARK2 Serine/threonine-protein kinase MARK2 yes no 3 0.014328 52.185 By matching By matching By MS/MS 1 1 1 5099800 1584900 2033800 1481100 471 546 500 1601;1602;1603 1151 1151 3070 1 DQSSLPSQMSLK D Q L K 0 0 0 1 0 2 0 0 0 0 2 1 1 0 1 4 0 0 0 0 0 0 12 0 1319.6391 REV__A0A1B0GUS7 yes yes 2 0.0042344 49.06 By matching By matching By MS/MS 1 1 1 1905200 573390 782380 549440 + 472 1985 501 1604;1605;1606 1152 1152 180 2837;2838;2839 1 DQTPDENDQVIVK AAEVVVPRDQTPDEND ENDQVIVKIIGHFYAS R D Q V K I 0 0 1 3 0 2 1 0 0 1 0 1 0 0 1 0 1 0 0 2 0 0 13 0 1499.7104 Q9NZI8 Q9NZI8 526 538 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 0.00083746 77.744 By MS/MS By MS/MS By matching 1 1 1 3834900 1198500 1801300 835080 473 1883 502 1607;1608;1609 1153;1154 1154 0 DQVANSAFVER YYITGETKDQVANSAF ANSAFVERLRKHGLEV K D Q E R L 2 1 1 1 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1234.5942 P07900 P07900 500 510 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.013829 58.592 By matching By matching By MS/MS 1 1 1 6904700 1780400 3766700 1357600 474 1122 503 1610;1611;1612 1155 1155 1 DQVTAQEIFQDNHEDGPTAK PLIEAKKKDQVTAQEI HEDGPTAKKLKTEQGG K D Q A K K 2 0 1 3 0 3 2 1 1 1 0 1 0 1 1 0 2 0 0 1 0 0 20 0 2242.0138 P13010 P13010 546 565 XRCC5 X-ray repair cross-complementing protein 5 yes yes 3 0.0048341 30.969 By MS/MS 1 579420 0 579420 0 475 1153 504 1613 1156 1156 1 DQVTEMAPKK EKPVKEEKDQVTEMAP VTEMAPKKTSKIASLI K D Q K K T 1 0 0 1 0 1 1 0 0 0 0 2 1 0 1 0 1 0 0 1 0 0 10 1 1145.5751 F8VZV4;Q8IVL0 F8VZV4 489 498 NAV3 Neuron navigator 3 yes no 2 0.0035595 70.525 By matching By MS/MS By MS/MS 1 1 1 2108600 469800 1276000 362720 476 682 505 1614;1615;1616 1157;1158 1157 2 DQYELLCLDNTR NLANKADRDQYELLCL LLCLDNTRKPVDEYKD R D Q T R K 0 1 1 2 1 1 1 0 0 0 3 0 0 0 0 0 1 0 1 0 0 0 12 0 1538.7035 P02787;C9JVG0 P02787 240 251 TF Serotransferrin yes no 2 0.00059133 90.653 By MS/MS By matching By matching 1 1 1 1274800 682220 366920 225670 477 1097 506 1617;1618;1619 1159 1159 1 DRPAMQLYQPGAR KRDRIRNKDRPAMQLY QLYQPGARSRNRLCPP K D R A R S 2 2 0 1 0 2 0 1 0 0 1 0 1 0 2 0 0 0 1 0 0 0 13 1 1501.746 Q9BZI7;A0A1B0GVA2 Q9BZI7 435 447 UPF3B Regulator of nonsense transcripts 3B yes no 3 0.0020619 73.927 By matching By MS/MS By MS/MS 1 1 1 1846500 758960 469180 618400 478 1802 507 1620;1621;1622 1160;1161 1160 3908 2 DRSSPPPGYIPDELHQVAR SIIGPTSRDRSSPPPG DELHQVARNGSFTSIN R D R A R N 1 2 0 2 0 1 1 1 1 1 1 0 0 0 4 2 0 0 1 1 0 0 19 1 2133.0603 Q9Y2U5 Q9Y2U5 161 179 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 yes yes 3 0.0087952 48.597 By MS/MS By matching By matching 1 1 1 2280600 1072600 478240 729730 479 1958 508 1623;1624;1625 1162 1162 2792;2793 1 DRTPPLLYR PDPLRGARDRTPPLLY RTPPLLYRDRDRDLYP R D R Y R D 0 2 0 1 0 0 0 0 0 0 2 0 0 0 2 0 1 0 1 0 0 0 9 1 1129.6244 A0A087WWP4;Q96T37 A0A087WWP4 522 530 RBM15 Putative RNA-binding protein 15 yes no 2 0.0081859 103.43 By matching By MS/MS By MS/MS 1 1 1 21785000 7586500 8602600 5595700 480 65 509 1626;1627;1628 1163;1164 1163 2882 2 DRYKTILPNPQSR DIPGHASKDRYKTILP ILPNPQSRVCLGR___ K D R S R V 0 2 1 1 0 1 0 0 0 1 1 1 0 0 2 1 1 0 1 0 0 0 13 2 1586.8529 E9PE54;C9IYI6;E7EUM0;H7C5I3;J3KR55;P35236 E9PE54 123 135 PTPN7 Tyrosine-protein phosphatase non-receptor type 7 yes no 3 0.017779 43.955 By MS/MS 1 0 0 0 0 481 393 510 1629 1165 1165 525;3016 1 DSAIPVESDTDDEGAPR RKNVNIYRDSAIPVES TDDEGAPRISLAEMLE R D S P R I 2 1 0 4 0 0 2 1 0 1 0 0 0 0 2 2 1 0 0 1 0 0 17 0 1772.7701 C9JA08;Q96D46 C9JA08 461 477 NMD3 60S ribosomal export protein NMD3 yes no 2 0.0011385 73.208 By MS/MS By MS/MS By matching 1 1 1 10189000 3613200 4104500 2470800 482 422 511 1630;1631;1632 1166;1167;1168 1166 563 3 DSAYQSITHYRPVSASR RERPMYGRDSAYQSIT YRPVSASRSSLDLSYY R D S S R S 2 2 0 1 0 1 0 0 1 1 0 0 0 0 1 4 1 0 2 1 0 0 17 1 1936.9391 Q5HY57;P50402 Q5HY57 123 139 EMD Emerin yes no 3 1.8807E-10 94.09 By MS/MS By MS/MS By MS/MS 1 1 1 8528200 3363500 2923400 2241400 483 1268 512 1633;1634;1635 1169;1170;1171 1170 1675;3806 3 DSDAGSSTPTTSTR KSSRKRKRDSDAGSST STPTTSTRSRDKDDES R D S T R S 1 1 0 2 0 0 0 1 0 0 0 0 0 0 1 4 4 0 0 0 0 0 14 0 1381.5957 K7EP28;Q9HBD4;A0A0A0MT49;P51532 K7EP28 109 122 SMARCA4 Transcription activator BRG1 yes no 2 0.0065637 56.569 By MS/MS By matching By matching 1 1 1 1088400 444310 511590 132490 484 162 513 1636;1637;1638 1172 1172 215;2924 1 DSENLASPSEYPENGER NLFSPVNRDSENLASP EYPENGERFSFLSKPV R D S E R F 1 1 2 1 0 0 4 1 0 0 1 0 0 0 2 3 0 0 1 0 0 0 17 0 1892.8024 P52948 P52948 617 633 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 2 4.71E-05 84.403 By matching By MS/MS By MS/MS 1 2 2 34204000 2850000 17508000 13846000 485 1288 514;515 1639;1640;1641;1642;1643 1173;1174;1175 1174 80 1697 3 DSFSHSPGAVSSLK LSRSDVFRDSFSHSPG PGAVSSLKVFTGLAAP R D S L K V 1 0 0 1 0 0 0 1 1 0 1 1 0 1 1 5 0 0 0 1 0 0 14 0 1417.6838 Q9H6R7 Q9H6R7 685 698 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes yes 2;3 0.0004056 80.371 By MS/MS By MS/MS By MS/MS 2 2 2 13905000 5599700 4944000 3361500 486 1826 516 1644;1645;1646;1647;1648;1649 1176;1177;1178;1179;1180 1177 2563 5 DSGRGDSVSDSGSDALR RLRKNSSRDSGRGDSV DSGSDALRSGLTVPTS R D S L R S 1 2 0 4 0 0 0 3 0 0 1 0 0 0 0 5 0 0 0 1 0 0 17 1 1679.7347 Q53EL6;Q5VZS7 Q53EL6 70 86 PDCD4 Programmed cell death protein 4 yes no 3 9.2935E-05 82.663 By MS/MS By MS/MS By MS/MS 1 1 1 4666400 1817200 1371000 1478200 487 1476 517 1650;1651;1652 1181;1182;1183 1183 1978 3 DSGSISLQETR SSFLSKTKDSGSISLQ SISLQETRRQKKTLKK K D S T R R 0 1 0 1 0 1 1 1 0 1 1 0 0 0 0 3 1 0 0 0 0 0 11 0 1191.5731 Q9H2G2 Q9H2G2 776 786 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0017942 85.672 By matching By MS/MS By matching 1 1 1 5663300 1839800 1822100 2001400 488 1816 518 1653;1654;1655 1184 1184 2545;2546 1 DSHSSEEDEASSQTDLSQTISK VMTRRGLRDSHSSEED DLSQTISKKTVRSIQE R D S S K K 1 0 0 3 0 2 3 0 1 1 1 1 0 0 0 7 2 0 0 0 0 0 22 0 2380.015 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 32 53 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 0.00029243 72.568 By MS/MS By MS/MS By matching 1 1 1 8337700 2001900 3549500 2786400 489 152 519 1656;1657;1658 1185;1186 1185 201;202;203 2 DSLITPHVSR EAKTAQEKDSLITPHV LITPHVSRSSTPRESP K D S S R S 0 1 0 1 0 0 0 0 1 1 1 0 0 0 1 2 1 0 0 1 0 0 10 0 1123.5986 P49792;J3KQ37;J3KNE0;Q7Z3J3;A6NKT7;Q99666;O14715;H7BZ48;F8VYC4;P0DJD0;P0DJD1 P49792 2446 2455 RANBP2;RGPD8;RGPD3;RGPD4;RGPD5;RGPD6;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 yes no 2 0.0098544 62.408 By MS/MS By MS/MS 1 1 633320 0 270290 363030 490 1261 520 1659;1660 1187;1188 1187 1663 2 DSLYASGANLR PLSSPPGRDSLYASGA YASGANLRDSPSYPDS R D S L R D 2 1 1 1 0 0 0 1 0 0 2 0 0 0 0 2 0 0 1 0 0 0 11 0 1165.5728 O94910 O94910 1382 1392 LPHN1 Latrophilin-1 yes yes 2 0.011117 58.246 By matching By MS/MS By matching 1 1 1 963680 269310 353090 341280 491 1057 521 1661;1662;1663 1189 1189 3756 1 DSMSAAEVGTGQYATTK ENHEIYMKDSMSAAEV TGQYATTKGISQTNLI K D S T K G 3 0 0 1 0 1 1 2 0 0 0 1 1 0 0 2 3 0 1 1 0 0 17 0 1715.7672 A8K968;A0A0A0MRA8;A0A0A0MSA4;J3KT37;A0A0J9YW26;A0A1B0GTF8 A8K968 350 366 EPB41L3 yes no 2 5.2653E-12 100.04 By MS/MS By MS/MS By matching 2 2 2 12689000 3765600 4979000 3944400 492 129 522;523 1664;1665;1666;1667;1668;1669 1190;1191;1192 1192 11 2911;3586 3 DSNAPKSPLTGYVR RKRKKPLRDSNAPKSP SPLTGYVRFMNERREQ R D S V R F 1 1 1 1 0 0 0 1 0 0 1 1 0 0 2 2 1 0 1 1 0 0 14 1 1503.7682 H0YNS8;H0YKM5;Q9NP66 H0YNS8 99 112 HMG20A High mobility group protein 20A yes no 2 0.0046632 65.695 By matching By matching By MS/MS 1 1 1 10242000 3350900 3817900 3073700 493 799 524 1670;1671;1672 1193 1193 1088 0 DSPVLIDFFEDTER SSALANTKDSPVLIDF DFFEDTERYRKQANKA K D S E R Y 0 1 0 3 0 0 2 0 0 1 1 0 0 2 1 1 1 0 0 1 0 0 14 0 1681.7835 P04196 P04196 140 153 HRG Histidine-rich glycoprotein yes yes 2 1.2771E-12 119.76 By matching By MS/MS By MS/MS 1 1 1 7934100 2994100 2333700 2606400 494 1102 525 1673;1674;1675 1194;1195 1194 2 DSSPGSSSTSLLIK GHRSPLEKDSSPGSSS SSTSLLIKKQRETSDT K D S I K K 0 0 0 1 0 0 0 1 0 1 2 1 0 0 1 6 1 0 0 0 0 0 14 0 1377.6987 U3KQJ0;H0YG46;J3KNE4;A0A0A0MTP3;Q99550 U3KQJ0 63 76 MPHOSPH9 M-phase phosphoprotein 9 yes no 3 0.013791 43.382 By matching By matching By MS/MS 1 1 1 1577300 487650 518570 571030 495 167 526 1676;1677;1678 1196 1196 228;229 1 DSTLIMQLLR TLNEDSYKDSTLIMQL TLIMQLLRDNLTLWTS K D S L R D 0 1 0 1 0 1 0 0 0 1 3 0 1 0 0 1 1 0 0 0 0 0 10 0 1188.6536 P27348;B7Z2E6;H0YB80;P31946;P31947;E7EX29;P63104;B0AZS6;P62258;K7EM20;P61981;Q04917 P27348 213 222 YWHAQ;YWHAZ;YWHAB;SFN;YWHAE;YWHAG;YWHAH 14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein epsilon;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein eta no no 2 1.4727E-06 96.711 By MS/MS 1 0 0 0 0 496 1197;557;1311;1342;1307 527 1679 1197 1197 40 1 DSTVVCKR NCTACTCRDSTVVCKR DSTVVCKRKCSHPGGC R D S K R K 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 2 0 0 8 1 963.48076 Q8N8U9 Q8N8U9 263 270 BMPER BMP-binding endothelial regulator protein yes yes 2 0.011528 60.961 By MS/MS By MS/MS 3 1 0 0 0 0 497 1642 528 1680;1681;1682;1683 1198;1199;1200;1201 1200 2248;3460 4 DSVFLSCSEDNR CVAASPHKDSVFLSCS LSCSEDNRILLWDTRC K D S N R I 0 1 1 2 1 0 1 0 0 0 1 0 0 1 0 3 0 0 0 1 0 0 12 0 1427.5987 Q9BQA1;H0Y711 Q9BQA1 180 191 WDR77 Methylosome protein 50 yes no 2 0.014337 59.908 By MS/MS By matching By matching 1 1 1 869280 503050 178510 187720 498 1774 529 1684;1685;1686 1202 1202 1 DSWEDIFELLFWGR EHFAMMQRDSWEDIFE FELLFWGRTSAGTRQP R D S G R T 0 1 0 2 0 0 2 1 0 1 2 0 0 2 0 1 0 2 0 0 0 0 14 0 1811.8519 P04004 P04004 311 324 VTN Vitronectin;Vitronectin V65 subunit;Vitronectin V10 subunit;Somatomedin-B yes yes 2 0.0077198 54.951 By matching By matching By MS/MS 1 1 1 8599600 1034400 2697600 4867700 499 1100 530 1687;1688;1689 1203 1203 1452 1 DSYVGDEAQSK VMVGMGQKDSYVGDEA VGDEAQSKRGILTLKY K D S S K R 1 0 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 11 0 1197.515 P63261;P60709;P68133;P68032;I3L3I0;I3L1U9;A6NL76;P63267;P62736;C9JUM1;C9JZR7;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 51 61 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 2 0.00024452 106.18 By MS/MS By MS/MS By matching 1 1 1 5605100 1674200 2984100 946790 500 1305 531 1690;1691;1692 1204;1205;1206 1205 3 DSYVGDEAQSKR VMVGMGQKDSYVGDEA GDEAQSKRGILTLKYP K D S K R G 1 1 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 0 12 1 1353.6161 P63261;P60709;P68133;P68032;I3L3I0;I3L1U9;A6NL76;P63267;P62736;C9JUM1;C9JZR7;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P63261 51 62 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 3 0.0010566 71.153 By matching By MS/MS By matching 1 1 1 2038100 768660 995420 274050 501 1305 532 1693;1694;1695 1207 1207 1 DTASLSTTPSESPR RGVQVLPRDTASLSTT TTPSESPRAQATSRLS R D T P R A 1 1 0 1 0 0 1 0 0 0 1 0 0 0 2 4 3 0 0 0 0 0 14 0 1447.6791 H0YJ30;G3V582;F5H039;Q9NQX3 H0YJ30 192 205 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 2 0.0013675 72.315 By MS/MS By MS/MS By MS/MS 1 1 1 1671500 550310 530670 590480 502 643 533 1696;1697;1698 1208;1209;1210 1210 866;867;868 3 DTDGGPKEEESPV AAESPDQKDTDGGPKE PKEEESPV________ K D T P V - 0 0 0 2 0 0 3 2 0 0 0 1 0 0 2 1 1 0 0 1 0 0 13 1 1358.5838 P53985 P53985 488 500 SLC16A1 Monocarboxylate transporter 1 yes yes 2 0.0075108 69.045 By matching By MS/MS By matching 1 1 1 2331200 722010 898460 710750 503 1292 534 1699;1700;1701 1211;1212 1212 1704 2 DTEEEDFHVDQVTTVK WERPFEVKDTEEEDFH VDQVTTVKVPMMKRLG K D T V K V 0 0 0 3 0 1 3 0 1 0 0 1 0 1 0 0 3 0 0 3 0 0 16 0 1890.8483 P01009 P01009 226 241 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes yes 3 0.00089241 71.529 By MS/MS By MS/MS By matching 1 1 1 2013400 981420 575360 456600 504 1085 535 1702;1703;1704 1213;1214 1213 2 DTGKTPVEPEVAIHR ________________ EPEVAIHRIRITLTSR K D T H R I 1 1 0 1 0 0 2 1 1 1 0 1 0 0 2 0 2 0 0 2 0 0 15 1 1647.858 E5RIP1;E5RJX2;P60866 E5RIP1 5 19 RPS20 40S ribosomal protein S20 yes no 3 0.014354 57.708 By MS/MS 1 1697000 1697000 0 0 505 510 536 1705 1215 1215 3047 1 DTIEDLSRQWRSHALNTSQ DNWMLMLRDTIEDLSR SHALNTSQ________ R D T S Q - 1 2 1 2 0 2 1 0 1 1 2 0 0 0 0 3 2 1 0 0 0 0 19 2 2256.0883 Q86YJ6 Q86YJ6 466 484 THNSL2 Threonine synthase-like 2 yes yes 2 0.0069808 42.556 By MS/MS By matching By matching 1 1 1 2236900 1025500 808280 403150 506 1602 537 1706;1707;1708 1216 1216 2187;2188;3448 1 DTILNINFQCAYPLDMK LVNDFIIRDTILNINF CAYPLDMKVSLQAALQ R D T M K V 1 0 2 2 1 1 0 0 0 2 2 1 1 1 1 0 1 0 1 0 0 0 17 0 2054.9805 P55259 P55259 311 327 GP2 Pancreatic secretory granule membrane major glycoprotein GP2 yes yes 2 2.6969E-08 89.466 By MS/MS By matching By MS/MS 1 1 2 12815000 3796800 3262500 5755700 507 1297 538;539 1709;1710;1711;1712 1217;1218;1219 1218 128 2 DTISYTELDFELIK VRIDIMEKDTISYTEL ELDFELIKVEVKEMEK K D T I K V 0 0 0 2 0 0 2 0 0 2 2 1 0 1 0 1 2 0 1 0 0 0 14 0 1685.84 Q6UX06 Q6UX06 147 160 OLFM4 Olfactomedin-4 yes yes 2 2.2344E-105 176.95 By MS/MS By MS/MS By MS/MS 1 1 1 72325000 16567000 29011000 26746000 508 1561 540 1713;1714;1715 1220;1221;1222 1220 3 DTLQSELVGQLYK HFLVNHVKDTLQSELV ELVGQLYKSSLLDDLL K D T Y K S 0 0 0 1 0 2 1 1 0 0 3 1 0 0 0 1 1 0 1 1 0 0 13 0 1492.7773 G8JLD5;O00429 G8JLD5 656 668 DNM1L Dynamin-1-like protein yes no 2 0.018261 46.406 By MS/MS 1 0 0 0 0 509 742 541 1716 1223 1223 3705 1 DTSPSSGSAVSSSK VQSLKTSRDTSPSSGS GSAVSSSKVLDKPSRL R D T S K V 1 0 0 1 0 0 0 1 0 0 0 1 0 0 1 7 1 0 0 1 0 0 14 0 1295.5841 F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8 F8WF16 136 149 PPHLN1 Periphilin-1 yes no 2 0.0065708 56.551 By matching By MS/MS By matching 1 1 1 6551600 2338100 2384400 1829000 510 377 542 1717;1718;1719 1224 1224 504 1 DTTPLNVLCSPGIQVVSVGIK DGRSDTQRDTTPLNVL QVVSVGIKDVFDFIPG R D T I K D 0 0 1 1 1 1 0 2 0 2 2 1 0 0 2 2 2 0 0 4 0 0 21 0 2196.1824 A0A087X0S5;P12109 A0A087X0S5 735 755 COL6A1 Collagen alpha-1(VI) chain yes no 2;3 0.00011919 70.98 By MS/MS By matching By matching 2 1 1 12282000 6112800 3266600 2902100 511 101 543 1720;1721;1722;1723 1225;1226 1226 2 DTTVISHSPNTSYDTALEAR AATVAAQRDTTVISHS YDTALEARIQKEEEEI R D T A R I 2 1 1 2 0 0 1 0 1 1 1 0 0 0 1 3 4 0 1 1 0 0 20 0 2177.0237 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 707 726 AMOT Angiomotin yes no 2;3 3.6436E-83 155.24 By MS/MS By MS/MS By MS/MS 2 3 3 165880000 72436000 38579000 54862000 512 1474 544;545 1724;1725;1726;1727;1728;1729;1730;1731 1227;1228;1229;1230;1231;1232 1229 1973;1974;3397;3398 6 DTVASVMYTVVTPMLNPFIYSLR PSTHSAQKDTVASVMY NPFIYSLRNQEIKSSL K D T L R N 1 1 1 1 0 0 0 0 0 1 2 0 2 1 2 2 3 0 2 4 0 0 23 0 2616.3332 P47890 P47890 271 293 OR1G1 Olfactory receptor 1G1 yes yes 3 0.01553 41.53 By MS/MS By matching 1 1 2335100 1325100 1010000 0 513 1248 546 1732;1733 1233 1233 1634;3321 1 DVDASPSPLSVQDLK PPAELVQRDVDASPSP PLSVQDLKGLGYEKGK R D V L K G 1 0 0 3 0 1 0 0 0 0 2 1 0 0 2 3 0 0 0 2 0 0 15 0 1569.7886 Q8IWZ8 Q8IWZ8 405 419 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 2 0.00056678 80.834 By MS/MS By MS/MS By MS/MS 1 1 1 4690700 1929900 1444500 1316400 514 1615 547 1734;1735;1736 1234;1235;1236 1236 2214;2215 3 DVDDGSGSPHSPHQLSSK PEAAFLSRDVDDGSGS SPHQLSSKSLPSQNLS R D V S K S 0 0 0 3 0 1 0 2 2 0 1 1 0 0 2 5 0 0 0 1 0 0 18 0 1848.8238 F5GWT4;Q9H4A3 F5GWT4 1774 1791 WNK1 Serine/threonine-protein kinase WNK1 yes no 3 0.00096 66.76 By MS/MS By MS/MS 1 1 4904400 0 4904400 0 515 633 548 1737;1738 1237;1238 1238 853 2 DVEDMELSDVEDDGSK PEPVTDNRDVEDMELS DVEDDGSKIIVEDRKE R D V S K I 0 0 0 5 0 0 3 1 0 0 1 1 1 0 0 2 0 0 0 2 0 0 16 0 1781.7149 Q5VT52 Q5VT52 367 382 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 3.4374E-08 99.069 By MS/MS By MS/MS By MS/MS 2 2 2 21627000 5637400 9185800 6804300 516 1518 549;550 1739;1740;1741;1742;1743;1744 1239;1240;1241;1242;1243;1244 1244 146 2054 6 DVESPSWR INRSLASKDVESPSWR DVESPSWRSTTVLGLL K D V W R S 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 2 0 1 0 1 0 0 8 0 974.44576 F5H6E2;O00159 F5H6E2 381 388 MYO1C Unconventional myosin-Ic yes no 2 0.014646 72.325 By MS/MS By matching By matching 1 1 1 1378900 583170 381850 413860 517 656 551 1745;1746;1747 1245 1245 877 1 DVFDFIPGSDQLNVISCQGLAPSQGR QVVSVGIKDVFDFIPG GLAPSQGRPGLSLVKE K D V G R P 1 1 1 3 1 3 0 3 0 2 2 0 0 2 2 3 0 0 0 2 0 0 26 0 2819.3548 A0A087X0S5;P12109 A0A087X0S5 756 781 COL6A1 Collagen alpha-1(VI) chain yes no 3 0.004837 42.106 By matching By matching By MS/MS 1 1 1 14043000 8727000 2112800 3203600 518 101 552 1748;1749;1750 1246 1246 1 DVFLGMFLYEYAR CKNYAEAKDVFLGMFL MFLYEYARRHPDYSVV K D V A R R 1 1 0 1 0 0 1 1 0 0 2 0 1 2 0 0 0 0 2 1 0 0 13 0 1622.7803 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 348 360 ALB Serum albumin yes no 2 1.3448E-26 145.28 By MS/MS By MS/MS By MS/MS 25 19 21 1265800000 368770000 334990000 562090000 + 519 194 553;554 1751;1752;1753;1754;1755;1756;1757;1758;1759;1760;1761;1762;1763;1764;1765;1766;1767;1768;1769;1770;1771;1772;1773;1774;1775;1776;1777;1778;1779;1780;1781;1782;1783;1784;1785;1786;1787;1788;1789;1790;1791;1792;1793;1794;1795;1796;1797;1798;1799;1800;1801;1802;1803;1804;1805;1806;1807;1808;1809;1810;1811;1812;1813;1814;1815 1247;1248;1249;1250;1251;1252;1253;1254;1255;1256;1257;1258;1259;1260;1261;1262;1263;1264;1265;1266;1267;1268;1269;1270;1271;1272;1273;1274;1275;1276;1277;1278;1279;1280;1281;1282;1283;1284;1285;1286;1287;1288;1289;1290;1291;1292;1293;1294;1295;1296;1297 1247 17 34 DVLSVAFSSDNR RRFVGHTKDVLSVAFS VAFSSDNRQIVSGSRD K D V N R Q 1 1 1 2 0 0 0 0 0 0 1 0 0 1 0 3 0 0 0 2 0 0 12 0 1308.631 D6RAU2;E9PD14;D6RFX4;D6RFZ9;D6RHH4;D6R9Z1;D6R9L0;P63244;H0YAF8;H0YAM7;J3KPE3;H0Y8W2 D6RAU2 107 118 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 2 0.015521 58.676 By MS/MS By matching By matching 1 1 1 679090 188770 272980 217340 520 480 555 1816;1817;1818 1298 1298 1 DVNAAIATIK YRGDVVPKDVNAAIAT NAAIATIKTKRSIQFV K D V I K T 3 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 0 10 0 1014.571 P68363;F5H5D3;Q9BQE3;Q71U36;Q6PEY2;Q13748 P68363 327 336 TUBA1B;TUBA1C;TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2 0.0031968 82.287 By MS/MS By matching 1 1 2401400 1584300 0 817120 521 1318 556 1819;1820 1299 1299 1 DVQLEGGCNYDYIEVFDGPYR YRVTVIFRDVQLEGGC EVFDGPYRSSPLIARV R D V Y R S 0 1 1 3 1 1 2 3 0 1 1 0 0 1 1 0 0 0 3 2 0 0 21 0 2508.0904 Q9UGM3 Q9UGM3 2052 2072 DMBT1 Deleted in malignant brain tumors 1 protein yes yes 2;3 0.00099426 87.02 By MS/MS By MS/MS By MS/MS 1 2 2 33724000 10538000 9334800 13851000 522 1901 557 1821;1822;1823;1824;1825 1300;1301;1302;1303;1304;1305 1305 6 DVQSPGFLNEPLSSK SATCKNIKDVQSPGFL LNEPLSSKSQRRKSLK K D V S K S 0 0 1 1 0 1 1 1 0 0 2 1 0 1 2 3 0 0 0 1 0 0 15 0 1616.8046 H0YCZ2;E9PPJ1;Q8NG31 H0YCZ2 92 106 CASC5 Protein CASC5 yes no 2 0.0013481 70.529 By MS/MS By matching By matching 1 1 1 6375000 2741600 1671300 1962100 523 614 558 1826;1827;1828 1306 1306 834 1 DVSLGTYGSR QDWEFQKRDVSLGTYG SLGTYGSRAAEPQEQE R D V S R A 0 1 0 1 0 0 0 2 0 0 1 0 0 0 0 2 1 0 1 1 0 0 10 0 1053.5091 Q9C0C2 Q9C0C2 934 943 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.011252 60.91 By MS/MS By matching By matching 1 1 1 1645300 635370 539870 470080 524 1804 559 1829;1830;1831 1307 1307 2513 1 DVTIGGSAPIYVK LGFSITSRDVTIGGSA GSAPIYVKNILPRGAA R D V V K N 1 0 0 1 0 0 0 2 0 2 0 1 0 0 1 1 1 0 1 2 0 0 13 0 1318.7133 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8 Q5VWV2 435 447 PARD3 Partitioning defective 3 homolog yes no 2 0.0073867 61.593 By MS/MS By matching By matching 1 1 1 893260 287640 305210 300410 525 1522 560 1832;1833;1834 1308 1308 3861 1 DVTMLMRKSWK TPKEGESRDVTMLMRK MLMRKSWKRSSKVILS R D V W K R 0 1 0 1 0 0 0 0 0 0 1 2 2 0 0 1 1 1 0 1 0 0 11 2 1393.721 H0Y8M9;H0Y9Y6;E5RJR1;Q6DN14 H0Y8M9 150 160 MCTP1 Multiple C2 and transmembrane domain-containing protein 1 yes no 2 0.017662 40.994 By MS/MS By matching 1 1 523250 385610 0 137650 526 513 561 1835;1836 1309 1309 3048 0 DVTNFTVGGFAPMSPR LAGGSKPRDVTNFTVG GFAPMSPRISSPMHPS R D V P R I 1 1 1 1 0 0 0 2 0 0 0 0 1 2 2 1 2 0 0 2 0 0 16 0 1694.8086 O00267 O00267 653 668 SUPT5H Transcription elongation factor SPT5 yes yes 2 7.4039E-05 86.455 By matching By MS/MS By MS/MS 1 1 1 10549000 4896000 2091400 3562000 527 973 562 1837;1838;1839 1310;1311 1311 70 1286 2 DVVFLIDGSQSAGPEFQYVR SPGVGGKRDVVFLIDG GPEFQYVRTLIERLVD R D V V R T 1 1 0 2 0 2 1 2 0 1 1 0 0 2 1 2 0 0 1 3 0 0 20 0 2226.0957 E7ENL6;P12111 E7ENL6 626 645 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 9.9993E-08 114.7 By MS/MS By MS/MS By MS/MS 2 2 2 17315000 8082400 3893500 5338600 528 522 563 1840;1841;1842;1843;1844;1845 1312;1313;1314;1315 1313 4 DVVFLLDGSEGVR PAPVSGEKDVVFLLDG LDGSEGVRSGFPLLKE K D V V R S 0 1 0 2 0 0 1 2 0 0 2 0 0 1 0 1 0 0 0 3 0 0 13 0 1404.7249 E7ENL6;P12111 E7ENL6 422 434 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.018843 54.259 By MS/MS By matching 1 1 356800 0 155360 201430 529 522 564 1846;1847 1316 1316 1 DVVLSIVNDLTIAESNCPR QDTFGRMRDVVLSIVN IAESNCPRGARVAVVT R D V P R G 1 1 2 2 1 0 1 0 0 2 2 0 0 0 1 2 1 0 0 3 0 0 19 0 2114.0678 E7ENL6;P12111 E7ENL6 1815 1833 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 1.1234E-42 132.31 By MS/MS By MS/MS By MS/MS 2 2 2 17403000 10209000 4111200 3082800 530 522 565 1848;1849;1850;1851;1852;1853 1317;1318;1319;1320;1321;1322;1323;1324 1322 8 DVVLSTSPK RQGSWDSRDVVLSTSP VVLSTSPKLLATATAN R D V P K L 0 0 0 1 0 0 0 0 0 0 1 1 0 0 1 2 1 0 0 2 0 0 9 0 944.51786 A0A075B784;Q9P275 A0A075B784 576 584 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.001945 109.66 By MS/MS By MS/MS 1 1 945750 573810 0 371940 531 13 566 1854;1855 1325;1326 1326 13 2 DYDDMSPR RPMPPSRRDYDDMSPR DYDDMSPRRGPPPPPP R D Y P R R 0 1 0 3 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 8 0 997.38111 P61978;Q5T6W2 P61978 279 286 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.010065 132.32 By MS/MS By MS/MS By MS/MS 3 2 2 103320000 33849000 36810000 32663000 532 1306 567;568 1856;1857;1858;1859;1860;1861;1862 1327;1328;1329;1330;1331 1328 1718;3816 5 DYDEEEQGYDSEKEK KDVKQVTRDYDEEEQG GYDSEKEKKEEKKPIE R D Y E K K 0 0 0 3 0 1 5 1 0 0 0 2 0 0 0 1 0 0 2 0 0 0 15 1 1862.733 Q5T757;Q05519 Q5T757 364 378 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2;3 6.1125E-07 89.911 By matching By MS/MS By MS/MS 2 2 2 15701000 4781700 6510100 4409700 533 1344 569 1863;1864;1865;1866;1867;1868 1332;1333 1333 1760 2 DYDEEEQGYDSEKEKK KDVKQVTRDYDEEEQG YDSEKEKKEEKKPIET R D Y K K E 0 0 0 3 0 1 5 1 0 0 0 3 0 0 0 1 0 0 2 0 0 0 16 2 1990.828 Q5T757;Q05519 Q5T757 364 379 SRSF11 Serine/arginine-rich splicing factor 11 yes no 3 0.0028952 73.735 By matching By matching By MS/MS 1 1 1 18616000 5809200 7541000 5266200 534 1344 570 1869;1870;1871 1334 1334 1760 1 DYELLCLDGTR WAKNLNEKDYELLCLD LLCLDGTRKPVEEYAN K D Y T R K 0 1 0 2 1 0 1 1 0 0 3 0 0 0 0 0 1 0 1 0 0 0 11 0 1353.6235 P02787 P02787 577 587 TF Serotransferrin yes yes 2 0.012318 75.509 By matching By MS/MS By MS/MS 1 1 1 2120100 765210 673890 681010 535 1097 571 1872;1873;1874 1335;1336 1335 2 DYENVPAADPSGSQQQAEK WVAFQCCRDYENVPAA GSQQQAEKDVPSSNIG R D Y E K D 3 0 1 2 0 3 2 1 0 0 0 1 0 0 2 2 0 0 1 1 0 0 19 0 2032.8974 Q8IWV1 Q8IWV1 293 311 LAX1 Lymphocyte transmembrane adapter 1 yes yes 3 0.017573 42.095 By MS/MS 1 0 0 0 0 536 1613 572 1875 1337 1337 2212;2213 1 DYEPPSPSPAPGAPPPPPQR LCRPPLPRDYEPPSPS APPPPPQRNASYLKTQ R D Y Q R N 2 1 0 1 0 1 1 1 0 0 0 0 0 0 10 2 0 0 1 0 0 0 20 0 2052.9905 A8MQ02;J3KN01;P55196;H0Y8L4 A8MQ02 1648 1667 MLLT4 Afadin yes no 3 0.0038847 49.537 By matching By matching By MS/MS 1 1 1 2445500 828130 864570 752760 537 316 573 1876;1877;1878 1338 1338 417;418 1 DYNNIGKFLNR SGILTLDKDYNNIGKF NIGKFLNRILGMEVHQ K D Y N R I 0 1 3 1 0 0 0 1 0 1 1 1 0 1 0 0 0 0 1 0 0 0 11 1 1352.6837 A3KN83 A3KN83 1099 1109 SBNO1 Protein strawberry notch homolog 1 yes yes 2 0.014579 57.598 By MS/MS 1 2999400 2999400 0 0 538 301 574 1879 1339 1339 3617 1 DYSGEMEGKHSQILKLSK WQLITHPRDYSGEMEG SQILKLSKLTPGLYEF R D Y S K L 0 0 0 1 0 1 2 2 1 1 2 3 1 0 0 3 0 0 1 0 0 0 18 2 2049.0201 H0Y4S8;B1AN15;E7EN73;Q8IZA0 H0Y4S8 184 201 KIAA0319L Dyslexia-associated protein KIAA0319-like protein yes no 3 0.015755 44.294 By MS/MS 1 0 0 0 0 539 330 575 1880 1340 1340 458;3624 1 DYSPSRNPPEVEAR GLGPGEARDYSPSRNP NPPEVEAR________ R D Y A R - 1 2 1 1 0 0 2 0 0 0 0 0 0 0 3 2 0 0 1 1 0 0 14 1 1615.759 Q9HCM7 Q9HCM7 1032 1045 FBRSL1 Fibrosin-1-like protein yes yes 3 7.9553E-05 86.262 By matching By matching By MS/MS 1 1 1 1959700 718820 600270 640580 540 1841 576 1881;1882;1883 1341 1341 2585 1 DYTGCSTSESLSPVK YRRKNSKRDYTGCSTS SESLSPVKQAPRKSPS R D Y V K Q 0 0 0 1 1 0 1 1 0 0 1 1 0 0 1 4 2 0 1 1 0 0 15 0 1629.7192 O95297 O95297 199 213 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.000951 74.966 By MS/MS By matching By MS/MS 1 1 1 4994200 1687800 1782300 1524200 541 1066 577 1884;1885;1886 1342;1343 1342 1431 2 DYVEKEHLQLSHQK ALRILLSKDYVEKEHL HLQLSHQKLSQLQEEF K D Y Q K L 0 0 0 1 0 2 2 0 2 0 2 2 0 0 0 1 0 0 1 1 0 0 14 1 1752.8795 B8ZZB3;E7ERF0;Q6ZP82 B8ZZB3 320 333 CCDC141 Coiled-coil domain-containing protein 141 yes no 2 0.0058358 58.699 By matching By MS/MS 1 1 1149400 0 714500 434850 542 385 578 1887;1888 1344 1344 3639 0 EAAENSLVAYK FATGNDRKEAAENSLV ENSLVAYKAASDIAMT K E A Y K A 3 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 1 0 0 11 0 1193.5928 P62258;K7EM20 P62258 143 153 YWHAE 14-3-3 protein epsilon yes no 2 0.0015554 96.034 By MS/MS By MS/MS By matching 1 1 1 2825500 700670 1769900 354920 543 1311 579 1889;1890;1891 1345;1346 1346 2 EAALPPVSPLK RGRDAVKREAALPPVS LPPVSPLKAALSEEEL R E A L K A 2 0 0 0 0 0 1 0 0 0 2 1 0 0 3 1 0 0 0 1 0 0 11 0 1120.6492 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1061 1071 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2 1.6424E-15 145.14 By MS/MS By MS/MS By MS/MS 1 1 1 21530000 7529700 6532600 7467500 544 550 580 1892;1893;1894 1347;1348;1349;1350;1351;1352;1353;1354;1355;1356;1357;1358;1359 1356 723 13 EAARSPDKPGGSPSASR QAETREAREAARSPDK GGSPSASRRKGRASEH R E A S R R 3 2 0 1 0 0 1 2 0 0 0 1 0 0 3 4 0 0 0 0 0 0 17 2 1668.818 Q9Y3T9 Q9Y3T9 45 61 NOC2L Nucleolar complex protein 2 homolog yes yes 3 0.0034292 72.968 By matching By MS/MS By matching 1 1 1 61284000 19752000 24002000 17530000 545 1966 581 1895;1896;1897 1360 1360 2813;2814;2815 1 EAASSPAGEPLR PSAAGADREAASSPAG SPAGEPLRKRPRRDGP R E A L R K 3 1 0 0 0 0 2 1 0 0 1 0 0 0 2 2 0 0 0 0 0 0 12 0 1183.5833 Q96EB6 Q96EB6 23 34 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 2 0.0014678 81.709 By matching By MS/MS 1 1 1522400 680030 842400 0 546 1731 582 1898;1899 1361;1362 1362 2378 2 EADDDEEVDDNIPEMPSPK RCPNMAMKEADDDEEV IPEMPSPKKMHQGKKK K E A P K K 1 0 1 5 0 0 4 0 0 1 0 1 1 0 3 1 0 0 0 1 0 0 19 0 2143.8739 P26358 P26358 698 716 DNMT1 DNA (cytosine-5)-methyltransferase 1 yes yes 2 6.2363E-25 110.34 By MS/MS By MS/MS By MS/MS 1 1 1 21995000 6626300 9096100 6272200 547 1194 583 1900;1901;1902 1363;1364;1365 1365 1545 3 EADSSSDYVNMDFTK QKPTHEQREADSSSDY YVNMDFTKRESNTPAP R E A T K R 1 0 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 15 0 1707.6934 O14654 O14654 914 928 IRS4 Insulin receptor substrate 4 yes yes 2 0.00026729 74.611 By MS/MS By MS/MS By matching 2 2 2 22251000 5658200 8687500 7905600 548 982 584;585 1903;1904;1905;1906;1907;1908 1366;1367;1368;1369 1369 72 1307;3738 4 EADSSSDYVNMDFTKR QKPTHEQREADSSSDY VNMDFTKRESNTPAPS R E A K R E 1 1 1 3 0 0 1 0 0 0 0 1 1 1 0 3 1 0 1 1 0 0 16 1 1863.7945 O14654 O14654 914 929 IRS4 Insulin receptor substrate 4 yes yes 2;3 0.0005574 82.651 By MS/MS By matching By MS/MS 3 2 2 54346000 26044000 15220000 13082000 549 982 586;587 1909;1910;1911;1912;1913;1914;1915 1370;1371;1372;1373 1373 72 1307;3738 2 EAEAAIYHLQLFEELR RMQHLIAREAEAAIYH LQLFEELRRLAPITSD R E A L R R 3 1 0 0 0 1 4 0 1 1 3 0 0 1 0 0 0 0 1 0 0 0 16 0 1930.9789 B4DNK4;P14618 B4DNK4 310 325 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2;3 1.8525E-12 106.52 By MS/MS By MS/MS By MS/MS 2 2 2 7317800 3932200 1531200 1854300 550 345 588 1916;1917;1918;1919;1920;1921 1374;1375;1376;1377 1374 4 EAEALLQLNGDFLVR FHGKLSRREAEALLQL LNGDFLVRESTTTPGQ R E A V R E 2 1 1 1 0 1 2 1 0 0 4 0 0 1 0 0 0 0 0 1 0 0 15 0 1686.8941 P29353;H0Y539;X6R6D0 P29353 497 511 SHC1 SHC-transforming protein 1 yes no 2 2.0744E-70 161.99 By MS/MS By MS/MS By matching 1 1 1 6357900 3783000 1008100 1566800 551 1204 589 1922;1923;1924 1378;1379 1378 2 EAEEGPTGASESQDSPR PAPPSKPKEAEEGPTG SESQDSPRKLKYEEPE K E A P R K 2 1 0 1 0 1 4 2 0 0 0 0 0 0 2 3 1 0 0 0 0 0 17 0 1745.734 H0Y507;Q5TCZ1 H0Y507 460 476 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.012039 46.892 By MS/MS By matching By matching 1 1 1 937900 267680 438190 232030 552 756 590 1925;1926;1927 1380 1380 1034 1 EAEFSDPENTR QSVGRQEKEAEFSDPE FSDPENTRTKKEQDWE K E A T R T 1 1 1 1 0 0 3 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 11 0 1293.5473 Q5T481 Q5T481 872 882 RBM20 RNA-binding protein 20 yes yes 2 0.0065819 65.809 By MS/MS By matching By MS/MS 1 1 1 5084700 1503800 2071200 1509700 553 1505 591 1928;1929;1930 1381;1382 1382 2034 2 EAFSLFDKDGDGTITTK EEQIAEFKEAFSLFDK GDGTITTKELGTVMRS K E A T K E 1 0 0 3 0 0 1 2 0 1 1 2 0 2 0 1 3 0 0 0 0 0 17 1 1843.884 P0DP25;P0DP24;P0DP23;E7ETZ0;H0Y7A7;E7EMB3;F8WBR5;M0QZ52;G3V479 P0DP25 15 31 CALM1;CALM2;CALM3 yes no 3 0.0034609 51.073 By matching By MS/MS 1 1 701120 319820 381290 0 554 518 592 1931;1932 1383 1383 1 EAGSPAQEFK NSSEEEAREAGSPAQE GSPAQEFKYQKSLPPR R E A F K Y 2 0 0 0 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 10 0 1062.4982 Q5JSZ5;Q5JT00 Q5JSZ5 610 619 PRRC2B Protein PRRC2B yes no 2 0.011448 60.691 By MS/MS By MS/MS By matching 1 1 1 3215400 927880 1334700 952870 555 1488 593 1933;1934;1935 1384;1385 1384 1999 2 EAIIPGSVYDR TTAMYDAREAIIPGSV IPGSVYDRSSQGRPSS R E A D R S 1 1 0 1 0 0 1 1 0 2 0 0 0 0 1 1 0 0 1 1 0 0 11 0 1218.6245 Q92900 Q92900 950 960 UPF1 Regulator of nonsense transcripts 1 yes yes 2 0.001868 86.136 By MS/MS By MS/MS By matching 1 1 1 1691000 528420 602180 560400 556 1713 594 1936;1937;1938 1386;1387 1386 3889 2 EALAEAALESPRPALVR HPEQENSREALAEAAL SPRPALVRSASSDTSE R E A V R S 5 2 0 0 0 0 3 0 0 0 3 0 0 0 2 1 0 0 0 1 0 0 17 1 1791.9843 J3QRP6;O14745 J3QRP6 152 168 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 3 0.0013378 62.035 By MS/MS By MS/MS By MS/MS 1 1 1 6699700 2374400 2594800 1730500 557 922 595 1939;1940;1941 1388;1389;1390 1388 1233 3 EALAIVFFGR RGSPPPAREALAIVFF LAIVFFGRQPQPNVSE R E A G R Q 2 1 0 0 0 0 1 1 0 1 1 0 0 2 0 0 0 0 0 1 0 0 10 0 1121.6233 Q16853 Q16853 123 132 AOC3 Membrane primary amine oxidase yes yes 2 0.00010904 130.22 By MS/MS 1 1645800 0 0 1645800 558 1460 596 1942 1391 1391 1 EALGLGPPAAQLTPPPAPVGLR LGPAGGDREALGLGPP PPAPVGLRGSGLRGLQ R E A L R G 4 1 0 0 0 1 1 3 0 0 4 0 0 0 6 0 1 0 0 1 0 0 22 0 2121.1946 A0A087WZ13;E9PAU2;Q8IY67 A0A087WZ13 451 472 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 3 0.0043261 69.256 By MS/MS By matching By matching 1 1 1 2967500 1662300 155460 1149700 559 83 597 1943;1944;1945 1392 1392 2889 1 EALQDVEDENQ GDGEEQNKEALQDVED QDVEDENQ________ K E A N Q - 1 0 1 2 0 2 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 11 0 1288.5419 P62258;I3L0W5 P62258 245 255 YWHAE 14-3-3 protein epsilon yes no 2 0.0041897 82.75 By matching By matching By MS/MS 1 1 1 17349000 5015100 7094900 5238800 560 1311 598 1946;1947;1948 1393 1393 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK AGASPVEKEAPAEGEA ASSTSSPKAEDGATPS K E A P K A 10 0 0 0 0 0 6 3 0 0 0 1 0 0 4 6 2 0 0 0 0 0 32 0 2914.2952 P29966 P29966 106 137 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 2.2884E-57 100.14 By MS/MS By MS/MS By MS/MS 1 1 1 104210000 33395000 50897000 19923000 561 1205 599 1949;1950;1951 1394;1395;1396;1397;1398 1396 1558 5 EAQAQQSQNVIDPNKER E A E R 2 1 2 1 0 4 2 0 0 1 0 1 0 0 1 1 0 0 0 1 0 0 17 1 1953.9504 REV__O95376 yes yes 2 5.3927E-05 66.663 By MS/MS 1 483490 0 0 483490 + 562 2002 600 1952 1399 1399 114 0 EAQQKVPDEEENEESDNEKETEK SDPVKAWKEAQQKVPD DNEKETEKSDSVTDSG K E A E K S 1 0 2 2 0 2 9 0 0 0 0 3 0 0 1 1 1 0 0 1 0 0 23 2 2733.1737 P11388 P11388 1092 1114 TOP2A DNA topoisomerase 2-alpha yes yes 3 0.0022997 69.259 By matching By MS/MS By matching 1 1 1 15975000 3633400 6906200 5435000 563 1145 601 1953;1954;1955 1400 1400 1488 1 EASRPPEEPSAPSPTLPAQFK TPPAPSSREASRPPEE PTLPAQFKQRAPMYNS R E A F K Q 3 1 0 0 0 1 3 0 0 0 1 1 0 1 6 3 1 0 0 0 0 0 21 1 2235.1172 H0Y3X6;A0A0C4DFX9;Q9H3P2 H0Y3X6 355 375 NELFA Negative elongation factor A yes no 3 0.001102 70.615 By matching By MS/MS By MS/MS 1 1 1 14962000 5854600 4165400 4942300 564 183 602 1956;1957;1958 1401;1402 1401 252 2 EASSLQNETTISERR KGSRVPSKEASSLQNE ETTISERRNAWPLRPC K E A R R N 1 2 1 0 0 1 3 0 0 1 1 0 0 0 0 3 2 0 0 0 0 0 15 1 1719.8388 A0A1B0GW49 A0A1B0GW49 74 88 yes yes 3 0.013015 42.317 By MS/MS 1 551130 551130 0 0 565 286 603 1959 1403 1403 378;379 1 EDALDDSVSSSSVHASPLASSPVRK EWDNYDLREDALDDSV LASSPVRKNLFRFGES R E D R K N 3 1 0 3 0 0 1 0 1 0 2 1 0 0 2 8 0 0 0 3 0 0 25 1 2540.2354 P49792;J3KQ37;J3KNE0;Q7Z3J3;A6NKT7;Q99666;O14715 P49792 2231 2255 RANBP2;RGPD8;RGPD3;RGPD4;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 3 0.0092343 47.75 By matching By MS/MS By matching 1 1 1 15584000 5532400 5429000 4622400 566 1261 604 1960;1961;1962 1404 1404 1664;1665 1 EDGGGWWYNR DPRKQCSKEDGGGWWY GGGWWYNRCHAANPNG K E D N R C 0 1 1 1 0 0 1 3 0 0 0 0 0 0 0 0 0 2 1 0 0 0 10 0 1238.5105 P02675;D6REL8;CON__P02676 P02675 427 436 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 2 0.0017408 95.099 By MS/MS By MS/MS By matching 1 1 1 3638100 1906700 898470 832970 567 1094 605 1963;1964;1965 1405;1406 1406 2 EDGGYTFTATPEDFPKK RVFKMTKREDGGYTFT TPEDFPKKHKAPV___ R E D K K H 1 0 0 2 0 0 2 2 0 0 0 2 0 2 2 0 3 0 1 0 0 0 17 1 1901.8683 A0A087WXC6;E9PF19;Q96E41;Q9Y4P3 A0A087WXC6 75 91 TBL2 Transducin beta-like protein 2 yes no 2 0.0067816 55.452 By MS/MS 1 0 0 0 0 568 69 606 1966 1407 1407 2883;2884 1 EDGNEEDKENQGDETQGQQPPQRR PPRQRQPREDGNEEDK GQQPPQRRYRRNFNYR R E D R R Y 0 2 2 3 0 5 5 3 0 0 0 1 0 0 2 0 1 0 0 0 0 0 24 2 2783.1979 H0Y449;P67809 H0Y449 307 330 YBX1 Nuclease-sensitive element-binding protein 1 yes no 4 0.003665 42.639 By MS/MS By MS/MS By matching 1 1 1 3956500 1475500 1604800 876170 569 750 607 1967;1968;1969 1408;1409 1408 2 EDLIWELLNQAQEHFGK VARSMGGKEDLIWELL QAQEHFGKDKSKEFQL K E D G K D 1 0 1 1 0 2 3 1 1 1 3 1 0 1 0 0 0 1 0 0 0 0 17 0 2069.0218 P02787 P02787 279 295 TF Serotransferrin yes yes 3 8.322E-29 128.85 By MS/MS 1 5704600 0 5704600 0 570 1097 608 1970 1410 1410 1 EDLNCQEEEDPMNK SMTFITSKEDLNCQEE EEEDPMNKLKGQKIVS K E D N K L 0 0 2 2 1 1 4 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 14 0 1749.6822 O75821;K7EL20;K7ENA8 O75821 135 148 EIF3G Eukaryotic translation initiation factor 3 subunit G yes no 2 0.011084 57.164 By MS/MS By matching 1 1 957760 0 652960 304810 571 1041 609 1971;1972 1411 1411 1 EDNPEEPSKEITSHEEGGGDVSPR TVDVQLPREDNPEEPS GGGDVSPRKEPQEPEV R E D P R K 0 1 1 2 0 0 6 3 1 1 0 1 0 0 3 3 1 0 0 1 0 0 24 1 2594.1368 A0A1P0AZG4;A0A1B0GUH9 A0A1P0AZG4 252 275 yes no 3 0.013129 42.843 By MS/MS 1 2370100 2370100 0 0 572 277 610 1973 1412 1412 366 1 EDQTEYLEER TKVILHLKEDQTEYLE QTEYLEERRVKEVVKK K E D E R R 0 1 0 1 0 1 4 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1310.5626 P08238;Q58FF7;Q58FF6;P07900;G3V2J8 P08238 187 196 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha no no 2 0.0022582 96.331 By MS/MS By MS/MS By matching 1 1 1 6294100 1319500 3304300 1670300 573 1126;1122 611 1974;1975;1976 1413;1414 1413 2 EDSGLFSPIR PRPVKASREDSGLFSP SGLFSPIRSSAFSPLG R E D I R S 0 1 0 1 0 0 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1119.556 Q9UKA4 Q9UKA4 442 451 AKAP11 A-kinase anchor protein 11 yes yes 2 0.0020656 81.709 By MS/MS By matching By MS/MS 1 1 1 4828400 1819900 1570800 1437600 574 1913 612 1977;1978;1979 1415;1416 1415 2697 2 EDVEVAESPLR SPPLLCTREDVEVAES EVAESPLRVLAETPDS R E D L R V 1 1 0 1 0 0 3 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 11 0 1242.6092 J3KMX1;Q99567 J3KMX1 449 459 NUP88 Nuclear pore complex protein Nup88 yes no 2 3.7647E-10 137.95 By MS/MS By MS/MS By matching 1 1 1 10645000 3639700 4265400 2739800 575 896 613 1980;1981;1982 1417;1418 1417 1204 2 EDYLDVYVFGVGPLVNQVNINALASK GKDRKNPREDYLDVYV NINALASKKDNEQHVF R E D S K K 2 0 3 2 0 1 1 2 0 1 3 1 0 1 1 1 0 0 2 5 0 0 26 0 2836.4647 A0A0G2JH38;E7ETN3;B4E1Z4;P00751;H7C5H1 A0A0G2JH38 420 445 CFB Complement factor B;Complement factor B Ba fragment;Complement factor B Bb fragment yes no 3 0.0059618 40.145 By MS/MS By matching 1 1 18756000 0 9086800 9669400 576 221 614 1983;1984 1419 1419 1 EDYLLSVRK VTLSDEMREDYLLSVR DYLLSVRKSIVDFVLK R E D R K S 0 1 0 1 0 0 1 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 9 1 1121.6081 Q8WXX0 Q8WXX0 212 220 DNAH7 Dynein heavy chain 7, axonemal yes yes 2 0.015015 46.994 By MS/MS 1 0 0 0 0 577 1689 615 1985 1420 1420 3883 1 EEADYSAFGTDTLIK LRIFIQKKEEADYSAF FGTDTLIKKKNVLTNV K E E I K K 2 0 0 2 0 0 2 1 0 1 1 1 0 1 0 1 2 0 1 0 0 0 15 0 1658.7675 Q9BYG5 Q9BYG5 97 111 PARD6B Partitioning defective 6 homolog beta yes yes 2 0.0031747 61.419 By MS/MS 1 755930 0 0 755930 578 1799 616 1986 1421 1421 2500 1 EEASDDDMEGDEAVVR EDVYGEVREEASDDDM EGDEAVVRCTLSANLV R E E V R C 2 1 0 4 0 0 4 1 0 0 0 0 1 0 0 1 0 0 0 2 0 0 16 0 1765.6949 O75643 O75643 222 237 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 2 1.1393E-36 146.84 By MS/MS By MS/MS By MS/MS 2 2 2 78644000 21105000 33508000 24031000 579 1038 617;618 1987;1988;1989;1990;1991;1992 1422;1423;1424;1425 1422 77 1396 4 EEDEEPESPPEKK KEKTPSPKEEDEEPES PESPPEKKTSTSPPPE K E E K K T 0 0 0 1 0 0 6 0 0 0 0 2 0 0 3 1 0 0 0 0 0 0 13 1 1541.6733 Q9H1E3 Q9H1E3 207 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 4.4551E-193 201.09 By MS/MS By MS/MS By MS/MS 2 2 2 9502400 2059900 4551700 2890800 580 1813 619 1993;1994;1995;1996;1997;1998 1426;1427;1428;1429;1430;1431;1432;1433;1434;1435 1430 2534 10 EEDEQLQNLK NFLRILDKEEDEQLQN DEQLQNLKRRYTAYRQ K E E L K R 0 0 1 1 0 2 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 10 0 1244.5885 A0A1B0GUG6;Q86WH2 A0A1B0GUG6 269 278 RASSF3 Ras association domain-containing protein 3 yes no 2 0.0027956 94.309 By matching By MS/MS 1 1 32567000 22128000 10439000 0 581 276 620 1999;2000 1436 1436 18;115;116 1 EEDGADASEEDLTR EEDVKDTREEDGADAS ASEEDLTRARQEEGAD R E E T R A 2 1 0 3 0 0 4 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 14 0 1535.6223 E5RHA3;Q86X53 E5RHA3 137 150 ERICH1 Glutamate-rich protein 1 yes no 2 1.3485E-05 68.978 By MS/MS By matching 1 1 2324000 1033300 0 1290700 582 506 621 2001;2002 1437 1437 3043 0 EEHGGLIRSPR KPLTRGAKEEHGGLIR GGLIRSPRHEKKKKVR K E E P R H 0 2 0 0 0 0 2 2 1 1 1 0 0 0 1 1 0 0 0 0 0 0 11 1 1249.6527 P26368 P26368 71 81 U2AF2 Splicing factor U2AF 65 kDa subunit yes yes 3 0.0094097 56.286 By matching By MS/MS By MS/MS 1 1 2 64337000 20133000 26163000 18041000 583 1195 622 2003;2004;2005;2006 1438;1439 1438 1546 2 EELMSSDLEETAGSTSIPK KKKKSFSKEELMSSDL AGSTSIPKRKKSTPKE K E E P K R 1 0 0 1 0 0 4 1 0 1 2 1 1 0 1 4 2 0 0 0 0 0 19 0 2022.9303 O00567 O00567 515 533 NOP56 Nucleolar protein 56 yes yes 2 3.2746E-12 92.295 By MS/MS By MS/MS By MS/MS 2 2 2 8935700 2282200 3443700 3209900 584 978 623;624 2007;2008;2009;2010;2011;2012 1440;1441;1442 1441 71 1293;1294 3 EEPVSSGPEEAVGK KKKRKFSKEEPVSSGP GPEEAVGKSSSKKKKK K E E G K S 1 0 0 0 0 0 4 2 0 0 0 1 0 0 2 2 0 0 0 2 0 0 14 0 1413.6624 O00567 O00567 565 578 NOP56 Nucleolar protein 56 yes yes 2 7.0807E-05 86.944 By MS/MS By MS/MS By MS/MS 1 1 1 4878400 1532800 1940600 1404900 585 978 625 2013;2014;2015 1443;1444;1445 1444 1295;1296 3 EEQEYEEEVEEEPRPAAK RVTEGTIREEQEYEEE EEPRPAAKVVEREEAV R E E A K V 2 1 0 0 0 1 9 0 0 0 0 1 0 0 2 0 0 0 1 1 0 0 18 1 2189.9601 O43491;H0Y5B0;E9PK52;E9PHY5;E9PMV8;Q6R5J7 O43491 769 786 EPB41L2 Band 4.1-like protein 2 yes no 3 0.0013375 72.428 By matching By MS/MS By MS/MS 1 1 1 4725400 1313800 2264500 1147100 586 1012 626 2016;2017;2018 1446;1447 1447 3750 2 EEQTDTSDGESVTHHIR RSGSRERREEQTDTSD ESVTHHIRRLNQQPSQ R E E I R R 0 1 0 2 0 1 3 1 2 1 0 0 0 0 0 2 3 0 0 1 0 0 17 0 1939.8508 A2AB27;P36915 A2AB27 43 59 GNL1 Guanine nucleotide-binding protein-like 1 yes no 3 0.0022005 61.139 By MS/MS By MS/MS By matching 1 1 1 21526000 7488500 9297200 4740800 587 299 627 2019;2020;2021 1448;1449 1449 398;2970;2971 2 EESDGEYDEFGR ENVEYIEREESDGEYD GEYDEFGRKKKKYRGK R E E G R K 0 1 0 2 0 0 4 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 12 0 1431.5426 O95218 O95218 118 129 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.001155 84.17 By matching By matching By MS/MS 1 1 1 4091400 1243200 1667600 1180600 588 1060 628 2022;2023;2024 1450 1450 1421 1 EFAPSDEELDSYR RYVMIFKKEFAPSDEE DEELDSYRRGEEWDPQ K E F Y R R 1 1 0 2 0 0 3 0 0 0 1 0 0 1 1 2 0 0 1 0 0 0 13 0 1556.6631 I3L0X5;I3L4C3;O75391 I3L0X5 59 71 SPAG7 Sperm-associated antigen 7 yes no 2 0.010542 54.524 By matching By MS/MS By matching 1 1 1 2027400 744890 722980 559560 589 883 629 2025;2026;2027 1451 1451 1188 1 EFCNLSLSERSR PKLEDAMKEFCNLSLS LSLSERSRQSYLIGLT K E F S R Q 0 2 1 0 1 0 2 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 12 1 1496.7042 Q86UK0 Q86UK0 620 631 ABCA12 ATP-binding cassette sub-family A member 12 yes yes 2 0.016324 56.729 By matching By matching By MS/MS 1 1 1 5045300 1670800 1786000 1588500 590 1594 630 2028;2029;2030 1452 1452 2176;2177;2178 1 EFHLNESGDPSSK FENKVLSKEFHLNESG ESGDPSSKSTEIKWKS K E F S K S 0 0 1 1 0 0 2 1 1 0 1 1 0 1 1 3 0 0 0 0 0 0 13 0 1445.6423 Q01105;A0A0C4DFV9;A0A087X027;P0DME0 Q01105 155 167 SET;SETSIP Protein SET;Protein SETSIP yes no 3 0.002485 60.364 By MS/MS By MS/MS By matching 1 1 1 1297000 514000 511730 271250 591 1329 631 2031;2032;2033 1453;1454 1454 2 EFITGDVEPTDAESEWHSENEEEEK QPLFDKRREFITGDVE SENEEEEKL_______ R E F E K L 1 0 1 2 0 0 9 1 1 1 0 1 0 1 1 2 2 1 0 1 0 0 25 0 2935.2156 E9PS34;E9PNJ7;A8MXH2;E9PKT8;C9J6D1;C9JZI7;Q99733 E9PS34 108 132 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 3 3.947E-09 78.418 By MS/MS By MS/MS By MS/MS 1 1 1 39372000 12464000 14169000 12740000 592 320 632 2034;2035;2036 1455;1456;1457 1457 426;427 3 EFNAETFTFHADICTLSEK VDETYVPKEFNAETFT DICTLSEKERQIKKQT K E F E K E 2 0 1 1 1 0 3 0 1 1 1 1 0 3 0 1 3 0 0 0 0 0 19 0 2259.0154 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 525 543 ALB Serum albumin yes no 3 0.0016502 57.173 By MS/MS By matching By matching 1 1 1 5570900 2201100 1876700 1493100 + 593 194 633 2037;2038;2039 1458 1458 1 EGEEPTVYSDEEEPKDESAR HHVGKLLKEGEEPTVY EPKDESARKND_____ K E G A R K 1 1 0 2 0 0 7 1 0 0 0 1 0 0 2 2 1 0 1 1 0 0 20 1 2294.9663 O00264 O00264 173 192 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 0.0029809 58.516 By MS/MS By matching By matching 1 1 1 1075900000 411620000 377210000 287110000 594 972 634 2040;2041;2042 1459 1459 1283;3232;3735 1 EGEEPTVYSDEEEPKDESARK HHVGKLLKEGEEPTVY PKDESARKND______ K E G R K N 1 1 0 2 0 0 7 1 0 0 0 2 0 0 2 2 1 0 1 1 0 0 21 2 2423.0612 O00264 O00264 173 193 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3;4 1.1605E-50 142.4 By MS/MS By MS/MS By MS/MS 2 2 1 199900000 112650000 57890000 29359000 595 972 635 2043;2044;2045;2046;2047 1460;1461;1462;1463;1464 1460 1283;3232;3735 5 EGKMSRQNLV EGFAGLKKEGKMSRQN KMSRQNLV________ K E G L V - 0 1 1 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 0 1 0 0 10 2 1160.5972 H7C1Y4 H7C1Y4 36 45 LMBR1 yes yes 2 0.0070254 57.177 By MS/MS 1 0 0 0 0 596 866 636 2048 1465 1465 45 65 1164 1 EGLELPEDEEEKK KSLVSVTKEGLELPED PEDEEEKKKMEESKAK K E G K K K 0 0 0 1 0 0 6 1 0 0 2 2 0 0 1 0 0 0 0 0 0 0 13 1 1543.7253 P08238;Q58FF7;Q58FF6;Q58FG0;P07900 P08238 539 551 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA5P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-alpha no no 2;3 0.0098979 42.789 By matching By MS/MS By matching 1 2 2 1873100 416360 923290 533410 597 1126;1122 637 2049;2050;2051;2052;2053 1466;1467 1466 1 EGMNIVEAMER HVVFGKVKEGMNIVEA NIVEAMERFGSRNGKT K E G E R F 1 1 1 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 0 11 0 1277.5744 P62937 P62937 134 144 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 0.004024 80.916 By matching By MS/MS By matching 1 1 1 1742000 349750 1067000 325270 598 1315 638 2054;2055;2056 1468 1468 1 EGMSNNSTTSISQARKAVEQLK ________________ RKAVEQLKMEACMDRV K E G L K M 2 1 2 0 0 2 2 1 0 1 1 2 1 0 0 4 2 0 0 1 0 0 22 2 2378.186 P50150 P50150 3 24 GNG4 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4 yes yes 3 0.00082225 58.997 By MS/MS By matching By matching 1 1 1 122100000 56879000 41152000 24072000 599 1266 639 2057;2058;2059 1469 1469 75;76;132 122 1 EGNTTEDDFPSSPGNGNK TSGSGFHREGNTTEDD SSPGNGNKSSNSSEER R E G N K S 0 0 3 2 0 0 2 3 0 0 0 1 0 1 2 2 2 0 0 0 0 0 18 0 1864.7711 Q15007 Q15007 295 312 WTAP Pre-mRNA-splicing regulator WTAP yes yes 2 0.011772 47.537 By MS/MS By matching By matching 1 1 1 12709000 4854100 4848400 3006700 600 1426 640 2060;2061;2062 1470 1470 1910 1 EGPEPPEEVPPPTTPPVPK VEPQLPSKEGPEPPEE PTTPPVPKVEPKGDGI K E G P K V 0 0 0 0 0 0 4 1 0 0 0 1 0 0 9 0 2 0 0 2 0 0 19 0 1993.0044 P48634 P48634 597 615 PRRC2A Protein PRRC2A yes yes 2;3 0.0074637 64.454 By MS/MS By MS/MS By matching 1 2 2 9601100 2553500 4952000 2095600 601 1251 641 2063;2064;2065;2066;2067 1471;1472 1472 3325;3326 2 EGSHSPLDSADVR PDAERRPREGSHSPLD PLDSADVRVHVPRTSI R E G V R V 1 1 0 2 0 0 1 1 1 0 1 0 0 0 1 3 0 0 0 1 0 0 13 0 1368.627 A0A0A0MRC4;A0A0A0MSK4;Q86YR5 A0A0A0MRC4 445 457 GPSM1 G-protein-signaling modulator 1 yes no 2 0.0028252 71.888 By matching By MS/MS By MS/MS 1 1 1 3164600 1255600 1287200 621910 602 131 642 2068;2069;2070 1473;1474 1473 175;176 2 EGSPAPLEPEPGAAQPK QTPESLSREGSPAPLE EPGAAQPKLAVIQEAR R E G P K L 3 0 0 0 0 1 3 2 0 0 1 1 0 0 5 1 0 0 0 0 0 0 17 0 1673.8261 Q01167 Q01167 396 412 FOXK2 Forkhead box protein K2 yes yes 2 0.010226 48.177 By matching By matching By MS/MS 1 1 1 15412000 5039400 5699200 4673500 603 1330 643 2071;2072;2073 1475 1475 1737 1 EGSPIPHDPEFGSK QTPECLSREGSPIPHD HDPEFGSKLASVPEYR R E G S K L 0 0 0 1 0 0 2 2 1 1 0 1 0 1 3 2 0 0 0 0 0 0 14 0 1495.6943 P85037 P85037 443 456 FOXK1 Forkhead box protein K1 yes yes 2;3 0.0029935 58.071 By MS/MS By MS/MS By MS/MS 2 2 2 29203000 10235000 10452000 8515900 604 1324 644 2074;2075;2076;2077;2078;2079 1476;1477;1478;1479 1478 1728 4 EGSTQQLQTTSPK FIKVYWHREGSTQQLQ QLQTTSPKPLVQQPIL R E G P K P 0 0 0 0 0 3 1 1 0 0 1 1 0 0 1 2 3 0 0 0 0 0 13 0 1403.6892 A0A087X0H9;Q5T8P6 A0A087X0H9 611 623 RBM26 RNA-binding protein 26 yes no 2 0.013347 71.558 By matching By MS/MS 1 1 1504400 0 918210 586170 605 97 645 2080;2081 1480 1480 2894 1 EGVLYVGSK AEAAGKTKEGVLYVGS GVLYVGSKTKEGVVHG K E G S K T 0 0 0 0 0 0 1 2 0 0 1 1 0 0 0 1 0 0 1 2 0 0 9 0 950.5073 D6RA31;E7EPV7;Q16143;P37840 D6RA31 35 43 SNCA;SNCB Alpha-synuclein;Beta-synuclein yes no 2 0.009082 78.113 By MS/MS By MS/MS 1 1 819040 424070 0 394970 606 483 646 2082;2083 1481;1482 1482 3660 2 EGVTPWASFK TSDGEKKREGVTPWAS VTPWASFKKMVTPKKR R E G F K K 1 0 0 0 0 0 1 1 0 0 0 1 0 1 1 1 1 1 0 1 0 0 10 0 1120.5553 Q02952 Q02952 605 614 AKAP12 A-kinase anchor protein 12 yes yes 2 0.00087623 105.25 By MS/MS By matching 1 1 3420100 0 1640100 1780000 607 1336 647 2084;2085 1483 1483 1748 1 EGVTPWASFKK TSDGEKKREGVTPWAS TPWASFKKMVTPKKRV R E G K K M 1 0 0 0 0 0 1 1 0 0 0 2 0 1 1 1 1 1 0 1 0 0 11 1 1248.6503 Q02952 Q02952 605 615 AKAP12 A-kinase anchor protein 12 yes yes 2 2.7318E-15 145.14 By MS/MS By MS/MS By MS/MS 1 1 1 23588000 9636300 6729500 7222600 608 1336 648 2086;2087;2088 1484;1485;1486 1485 1748 3 EGWAPASYLKKAK WYIRYLGKEGWAPASY ASYLKKAKDDLPTRKK K E G A K D 3 0 0 0 0 0 1 1 0 0 1 3 0 0 1 1 0 1 1 0 0 0 13 2 1447.7823 H0Y507;Q5TCZ1 H0Y507 239 251 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 3 0.0027221 63.662 By MS/MS By matching By matching 1 1 1 78487000 38378000 14380000 25730000 609 756 649 2089;2090;2091 1487 1487 1035;3708 1 EGYYGYTGAFR NLCEPNNKEGYYGYTG YGYTGAFRCLVEKGDV K E G F R C 1 1 0 0 0 0 1 3 0 0 0 0 0 1 0 0 1 0 3 0 0 0 11 0 1282.5619 P02787;H7C5E8 P02787 531 541 TF Serotransferrin yes no 2 0.0051492 72.643 By matching By MS/MS By MS/MS 1 1 1 4147400 2105300 817220 1224900 610 1097 650 2092;2093;2094 1488;1489 1489 2 EHALLAYTLGVK ISKNGQTREHALLAYT LAYTLGVKQLIVGVNK R E H V K Q 2 0 0 0 0 0 1 1 1 0 3 1 0 0 0 0 1 0 1 1 0 0 12 0 1313.7343 Q5VTE0;P68104;A0A087WV01;Q05639 Q5VTE0 135 146 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 yes no 2 0.0090523 68.626 By MS/MS By matching 1 1 699860 559610 140250 0 611 1317 651 2095;2096 1490 1490 1 EHIEIIAPSPQR RMDPFATKEHIEIIAP IIAPSPQRSRSFSVGI K E H Q R S 1 1 0 0 0 1 2 0 1 3 0 0 0 0 2 1 0 0 0 0 0 0 12 0 1388.7412 C9J185;E7ER02;Q9NZJ5 C9J185 586 597 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 yes no 2 0.0069602 62.891 By MS/MS By MS/MS By matching 1 1 1 928810 344460 288440 295900 612 404 652 2097;2098;2099 1491;1492 1491 543 2 EHIVDLEMLTVSSIGTFR VKSLSGPREHIVDLEM VSSIGTFRTSSVLRLT R E H F R T 0 1 0 1 0 0 2 1 1 2 2 0 1 1 0 2 2 0 0 2 0 0 18 0 2046.0456 A0A0U1RQV3;Q12805 A0A0U1RQV3 247 264 EFEMP1 EGF-containing fibulin-like extracellular matrix protein 1 yes no 3 7.103E-29 127.2 By MS/MS By MS/MS By MS/MS 1 1 1 5639500 2759800 1635500 1244300 613 254 653 2100;2101;2102 1493;1494;1495 1493 22 3 EHSLQVSPSLEK PSLHSFIKEHSLQVSP QVSPSLEKGAKADTGL K E H E K G 0 0 0 0 0 1 2 0 1 0 2 1 0 0 1 3 0 0 0 1 0 0 12 0 1352.6936 O95235 O95235 526 537 KIF20A Kinesin-like protein KIF20A yes yes 2;3 0.0003478 98.368 By MS/MS By matching By MS/MS 2 2 2 6440400 2323500 2413100 1703900 614 1062 654 2103;2104;2105;2106;2107;2108 1496;1497;1498;1499 1499 1425 4 EIAEAYLGK SMVLTKMKEIAEAYLG IAEAYLGKATKDAGTI K E I G K A 2 0 0 0 0 0 2 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 992.51786 E9PKE3;P11142;E9PN89;E9PI65;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6 E9PKE3 129 137 HSPA8 Heat shock cognate 71 kDa protein yes no 2 0.0057948 87.181 By matching By MS/MS 1 1 1545200 266290 1279000 0 615 598 655 2109;2110 1500 1500 1 EIAQDFKTDLR LPFQRLVREIAQDFKT QDFKTDLRFQSAAIGG R E I L R F 1 1 0 2 0 1 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 11 1 1334.683 K7EMV3;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431 K7EMV3 74 84 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2 0.008612 72.643 By MS/MS By matching 1 1 1090100 479540 610560 0 616 339 656 2111;2112 1501 1501 1 EIAVGDSEGQIVIYDVGEQIAVPR VRWTHSGREIAVGDSE GEQIAVPRNDEWARFG R E I P R N 2 1 0 2 0 2 3 3 0 4 0 0 0 0 1 1 0 0 1 4 0 0 24 0 2556.3071 Q13409 Q13409 584 607 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes yes 3 0.013489 37.13 By MS/MS By matching 1 1 3621300 0 1379600 2241600 617 1387 657 2113;2114 1502 1502 1 EIEDAEKYSFMATVTK GEELKQAKEIEDAEKY SFMATVTKAPKKQIQF K E I T K A 2 0 0 1 0 0 3 0 0 1 0 2 1 1 0 1 2 0 1 1 0 0 16 1 1860.8815 O43865 O43865 21 36 AHCYL1 Putative adenosylhomocysteinase 2 yes yes 2 0.0010357 80.245 By matching By MS/MS By matching 1 1 1 3956100 1276600 1700800 978730 618 1017 658 2115;2116;2117 1503 1503 1358 1 EIESEIDSEEELINK ELVNWYLKEIESEIDS SEEELINKKRIIEKVI K E I N K K 0 0 1 1 0 0 6 0 0 3 1 1 0 0 0 2 0 0 0 0 0 0 15 0 1775.8313 Q14566 Q14566 755 769 MCM6 DNA replication licensing factor MCM6 yes yes 2 0.0020556 67.648 By MS/MS By MS/MS By matching 1 1 1 1835000 774630 566480 493900 619 1411 659 2118;2119;2120 1504;1505 1504 1881 2 EIEYVETVTSR NALKYEHKEIEYVETV YVETVTSRQSEIQKFI K E I S R Q 0 1 0 0 0 0 3 0 0 1 0 0 0 0 0 1 2 0 1 2 0 0 11 0 1324.6511 Q9UHR4 Q9UHR4 160 170 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 0.0013383 87.806 By MS/MS By MS/MS By matching 1 1 1 1933800 805190 563490 565090 620 1906 660 2121;2122;2123 1506;1507 1507 3926 2 EIFSGSLR EDGIKREREIFSGSLR EIFSGSLRTQTHPTEE R E I L R T 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 2 0 0 0 0 0 0 8 0 907.47633 Q68DQ2 Q68DQ2 172 179 CRYBG3 Very large A-kinase anchor protein yes yes 2 0.012054 86.898 By MS/MS 1 0 0 0 0 621 1530 661 2124 1508 1508 2082 1 EIIDLVLDR RGHYTIGKEIIDLVLD IIDLVLDRIRKLADQC K E I D R I 0 1 0 2 0 0 1 0 0 2 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1084.6128 P68363;F5H5D3;Q9BQE3;Q71U36;F8VVB9;F8VRZ4;F8VS66;F8VQQ4 P68363 113 121 TUBA1B;TUBA1C;TUBA1A Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain yes no 2 0.0038823 116.25 By matching By MS/MS By MS/MS 1 1 1 10125000 4129100 3794700 2201300 622 1318 662 2125;2126;2127 1509;1510 1510 2 EILGTAQSVGCNVDGR RELSGTIKEILGTAQS VGCNVDGRHPHDIIDD K E I G R H 1 1 1 1 1 1 1 3 0 1 1 0 0 0 0 1 1 0 0 2 0 0 16 0 1674.7995 P30050 P30050 131 146 RPL12 60S ribosomal protein L12 yes yes 2 0.0057576 57.019 By matching By MS/MS 1 1 1314800 488420 826350 0 623 1206 663 2128;2129 1511 1511 1 EIPSATQSPISK KLEKKDAKEIPSATQS ATQSPISKKRKKKGFL K E I S K K 1 0 0 0 0 1 1 0 0 2 0 1 0 0 2 3 1 0 0 0 0 0 12 0 1256.6612 I3L1L3;Q9BQG0 I3L1L3 1076 1087 MYBBP1A Myb-binding protein 1A yes no 2 0.00054844 100.73 By MS/MS By MS/MS By MS/MS 1 1 1 34057000 12079000 11822000 10157000 624 885 664 2130;2131;2132 1512;1513;1514;1515 1512 1189 4 EIQNGNLHESDSESVPR EKKKNKKKEIQNGNLH SDSESVPRDFKLSDAL K E I P R D 0 1 2 1 0 1 3 1 1 1 1 0 0 0 1 3 0 0 0 1 0 0 17 0 1909.8766 Q86UP2 Q86UP2 66 82 KTN1 Kinectin yes yes 2;3 0.00011426 83.314 By MS/MS By MS/MS By MS/MS 6 6 6 133590000 46609000 48820000 38159000 625 1595 665;666 2133;2134;2135;2136;2137;2138;2139;2140;2141;2142;2143;2144;2145;2146;2147;2148;2149;2150 1516;1517;1518;1519;1520;1521;1522;1523;1524;1525;1526;1527 1521 99;100;139 2179;2180 12 EISPDTTLLDLQNNDISELRK LGLKSVPKEISPDTTL NDISELRKDDFKGLQH K E I R K D 0 1 2 3 0 1 2 0 0 2 4 1 0 0 1 2 2 0 0 0 0 0 21 1 2413.2336 P21810;C9JKG1 P21810 87 107 BGN Biglycan yes no 3 0.0030936 46.131 By MS/MS By matching 1 1 736590 511020 0 225560 626 1183 667 2151;2152 1528 1528 1 EISPGSGPGEIR ITEEMNGKEISPGSGP GSGPGEIRKVEPVTQK K E I I R K 0 1 0 0 0 0 2 3 0 2 0 0 0 0 2 2 0 0 0 0 0 0 12 0 1197.599 O43491;H0Y5B0;E9PK52;E9PHY5;E9PMV8;Q6R5J7;E9PMG5 O43491 713 724 EPB41L2 Band 4.1-like protein 2 yes no 2 0.00034431 91.636 By MS/MS By MS/MS By MS/MS 2 2 2 8371700 2515800 3357600 2498300 627 1012 668 2153;2154;2155;2156;2157;2158 1529;1530;1531;1532 1532 1347;1348 4 EISPSVTKKNTNK KEKPEKDKEISPSVTK VTKKNTNKKTKPKSDI K E I N K K 0 0 2 0 0 0 1 0 0 1 0 3 0 0 1 2 2 0 0 1 0 0 13 2 1444.7886 Q8N488 Q8N488 97 109 RYBP RING1 and YY1-binding protein yes yes 2 0.015335 45.257 By MS/MS 1 0 0 0 0 628 1632 669 2159 1533 1533 2235;2236 1 EITALAPSTMK GIADRMQKEITALAPS ALAPSTMKIKIIAPPE K E I M K I 2 0 0 0 0 0 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 0 11 0 1160.6111 P63261;P60709;P68133;P68032;A6NL76;P63267;P62736 P63261 316 326 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 2 0.0041896 85.862 By MS/MS By MS/MS By matching 2 2 2 11069000 3117600 6936100 1015100 629 1305 670;671 2160;2161;2162;2163;2164;2165 1534;1535;1536;1537 1536 4 EKEISDDEAEEEKGEK TLYLEKEREKEISDDE AEEEKGEKEEEDKDDE R E K E K E 1 0 0 2 0 0 7 1 0 1 0 3 0 0 0 1 0 0 0 0 0 0 16 2 1863.8222 P08238 P08238 222 237 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.0043384 65.287 By MS/MS By matching By MS/MS 2 1 1 4525500 2214500 1351700 959260 630 1126 672 2166;2167;2168;2169 1538;1539 1538 1469 2 EKENLCNLEKK NLIMMLQREKENLCNL NLCNLEKKYSSLSGGK R E K K K Y 0 0 2 0 1 0 3 0 0 0 2 3 0 0 0 0 0 0 0 0 0 0 11 2 1403.7079 E9PGF6;E9PFQ4;Q86SQ0 E9PGF6 386 396 PHLDB2 Pleckstrin homology-like domain family B member 2 yes no 2 0.0097421 46.158 By MS/MS 1 610780 0 0 610780 631 577 673 2170 1540 1540 1 EKEVDGLLTSEPMGSPVSSK LKEEPKGKEKEVDGLL MGSPVSSKTESVSDKE K E K S K T 0 0 0 1 0 0 3 2 0 0 2 2 1 0 2 4 1 0 0 2 0 0 20 1 2089.0249 H3BUF6;Q8WWM7 H3BUF6 586 605 ATXN2L Ataxin-2-like protein yes no 2;3 0.0028614 58.997 By matching By MS/MS By MS/MS 2 1 2 5898900 2754800 1259700 1884400 632 850 674 2171;2172;2173;2174;2175 1541;1542;1543 1541 1142 3 EKLQEEGGGSDEEETGSPSEDGMQSAR KRLIAEAKEKLQEEGG EDGMQSARTQARPREP K E K A R T 1 1 0 2 0 2 7 5 0 0 1 1 1 0 1 4 1 0 0 0 0 0 27 1 2838.1734 Q13610 Q13610 41 67 PWP1 Periodic tryptophan protein 1 homolog yes yes 3 1.8814E-24 94.276 By MS/MS By matching By matching 1 1 1 26268000 7436800 10135000 8696800 633 1397 675 2176;2177;2178 1544 1544 1852 1 EKLQSFDSPER KGRGNDRREKLQSFDS QSFDSPERKRIKYSRE R E K E R K 0 1 0 1 0 1 2 0 0 0 1 1 0 1 1 2 0 0 0 0 0 0 11 1 1334.6466 E9PGM9;P78332 E9PGM9 886 896 RBM6 RNA-binding protein 6 yes no 2 0.0013567 102.33 By MS/MS By MS/MS By MS/MS 1 1 1 6974300 2470700 2370200 2133400 634 583 676 2179;2180;2181 1545;1546;1547 1547 768;769 3 EKSPVREPVDNLSPEER HSKSPHFREKSPVREP DNLSPEERDARTVFCM R E K E R D 0 2 1 1 0 0 4 0 0 0 1 1 0 0 3 2 0 0 0 2 0 0 17 2 1979.9912 Q86U06 Q86U06 147 163 RBM23 Probable RNA-binding protein 23 yes yes 3 0.0052517 61.127 By matching By MS/MS By matching 1 1 1 7992900 3513900 2206200 2272900 635 1591 677 2182;2183;2184 1548 1548 2172 1 EKTPELPEPSVK PSPAPEKKEKTPELPE ELPEPSVKVKEPSVQE K E K V K V 0 0 0 0 0 0 3 0 0 0 1 2 0 0 3 1 1 0 0 1 0 0 12 1 1352.7187 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 218 229 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 4.092E-112 182.37 By MS/MS By MS/MS By MS/MS 2 3 2 38609000 13258000 14697000 10654000 636 322 678 2185;2186;2187;2188;2189;2190;2191 1549;1550;1551;1552;1553;1554;1555;1556 1551 2981 8 EKTPSPKEEDEEPESPPEK PTASKASKEKTPSPKE EPESPPEKKTSTSPPP K E K E K K 0 0 0 1 0 0 7 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 19 2 2180.9961 Q9H1E3 Q9H1E3 200 218 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0040666 73.252 By MS/MS By MS/MS By matching 1 1 1 4557300 1896300 1800200 860790 637 1813 679 2192;2193;2194 1557;1558 1557 2534 2 ELAEDGYSGVEVR ELNEFLTRELAEDGYS GYSGVEVRVTPTRTEI R E L V R V 1 1 0 1 0 0 3 2 0 0 1 0 0 0 0 1 0 0 1 2 0 0 13 0 1422.6627 P23396;F2Z2S8;H0YF32;H0YCJ7;E9PPU1;H0YEU2;E9PL09;E9PQ96;E9PJH4;E9PK82 P23396 28 40 RPS3 40S ribosomal protein S3 yes no 2 4.1827E-12 120.77 By MS/MS By MS/MS 1 1 3350300 1057200 2293100 0 638 1191 680 2195;2196 1559;1560 1560 1 ELAEQTLNNIK ALIVEPSRELAEQTLN EQTLNNIKQFKKYIDN R E L I K Q 1 0 2 0 0 1 2 0 0 1 2 1 0 0 0 0 1 0 0 0 0 0 11 0 1271.6721 F1T0B3;A0A087X2G1;Q92499 F1T0B3 216 226 DDX1 ATP-dependent RNA helicase DDX1 yes no 2 0.004031 76.943 By MS/MS By MS/MS By MS/MS 1 1 1 1486200 467220 675900 343060 639 115 681 2197;2198;2199 1561;1562;1563 1563 3 ELDRDTVFALVNYIFFK GKIVDLVKELDRDTVF LVNYIFFKGKWERPFE K E L F K G 1 1 1 2 0 0 1 0 0 1 2 1 0 3 0 0 1 0 1 2 0 0 17 1 2089.0884 P01009;A0A0G2JRN3;A0A024R6I7 P01009 199 215 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 3 0.0031633 56.407 By MS/MS 1 907380 0 907380 0 640 1085 682 2200 1564 1564 54 1 ELEEEEENSDEDELDSHTMVK KRHEEQQRELEEEEEN LDSHTMVKTSVESVGT R E L V K T 0 0 1 3 0 0 8 0 1 0 2 1 1 0 0 2 1 0 0 1 0 0 21 0 2506.0177 E5RFQ9;A0A087WZ06;Q13188 E5RFQ9 197 217 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes no 3 0.00068403 70.413 By MS/MS 1 2320400 0 2320400 0 641 82 683 2201 1565 1565 100 1 ELEQHIQTSDPENFQSEER SSASVDNRELEQHIQT ENFQSEERSDSDVNND R E L E R S 0 1 1 1 0 3 5 0 1 1 1 0 0 1 1 2 1 0 0 0 0 0 19 0 2315.0302 Q96K76 Q96K76 925 943 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 3 0.0044617 49.768 By matching By MS/MS 1 1 2195400 0 1190500 1004800 642 1745 684 2202;2203 1566 1566 2410 1 ELFDDPSYVNVQNLDKAR PPPPCPGRELFDDPSY VQNLDKARQAVGGAGP R E L A R Q 1 1 2 3 0 1 1 0 0 0 2 1 0 1 1 1 0 0 1 2 0 0 18 1 2122.0331 P29353;H0Y539;X6R6D0;Q5T188 P29353 420 437 SHC1 SHC-transforming protein 1 yes no 3 0.0051244 53.255 By MS/MS By matching By MS/MS 1 1 1 1638100 909660 274860 453580 643 1204 685 2204;2205;2206 1567;1568 1567 1553 2 ELILGSETPSSPR LVLRPWIRELILGSET SETPSSPRAGQLLEDA R E L P R A 0 1 0 0 0 0 2 1 0 1 2 0 0 0 2 3 1 0 0 0 0 0 13 0 1384.7198 R4GNJ5;A0A0C4DGT6;Q96AP0 R4GNJ5 15 27 ACD Adrenocortical dysplasia protein homolog yes no 2 0.004737 67.964 By matching By MS/MS 1 1 1779100 907390 0 871710 644 207 686 2207;2208 1569 1569 289 1 ELIPQESPR GKVGPDGKELIPQESP LIPQESPRVGGFGFVA K E L P R V 0 1 0 0 0 1 2 0 0 1 1 0 0 0 2 1 0 0 0 0 0 0 9 0 1067.5611 Q96DF8 Q96DF8 286 294 DGCR14 Protein DGCR14 yes yes 2 0.0084601 70.399 By MS/MS By matching By matching 1 1 1 3414900 1130500 1205800 1078500 645 1728 687 2209;2210;2211 1570 1570 2370 1 ELISNASDALDK SNKEIFLRELISNASD NASDALDKIRYESLTD R E L D K I 2 0 1 2 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 0 12 0 1274.6354 P08238;F8W026;P14625;Q96GW1 P08238 42 53 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin no no 2 0.0011808 86.882 By MS/MS By MS/MS By matching 1 1 1 8575700 2719200 4235000 1621500 646 1126;1159 688 2212;2213;2214 1571;1572 1571 2 ELISNSSDALDK SNKEIFLRELISNSSD NSSDALDKIRYESLTD R E L D K I 1 0 1 2 0 0 1 0 0 1 2 1 0 0 0 3 0 0 0 0 0 0 12 0 1290.6303 P07900;G3V2J8;Q14568 P07900 47 58 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 yes no 2 0.0040428 75.566 By matching By MS/MS By matching 1 1 1 7216100 2031700 3637500 1546800 647 1122 689 2215;2216;2217 1573 1573 1 ELKTDSSPNQAR YIQFSNHKELKTDSSP DSSPNQARAQAALQAV K E L A R A 1 1 1 1 0 1 1 0 0 0 1 1 0 0 1 2 1 0 0 0 0 0 12 1 1344.6634 K7ES59;A0A087WU68;A6NLN1;P26599 K7ES59 105 116 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2 0.0087367 59.155 By MS/MS 1 0 0 0 0 648 35 690 2218 1574 1574 37 1 ELLHSVHPESPNLK QTDGILTKELLHSVHP HPESPNLKTSLCFKEQ K E L L K T 0 0 1 0 0 0 2 0 2 0 3 1 0 0 2 2 0 0 0 1 0 0 14 0 1598.8417 Q9Y217 Q9Y217 552 565 MTMR6 Myotubularin-related protein 6 yes yes 3 4.3197E-05 86.498 By MS/MS By MS/MS 1 1 4578800 2681000 1897800 0 649 1949 691 2219;2220 1575;1576 1575 2781 2 ELQYIDAISNK NPQKYSDKELQYIDAI YIDAISNKQGELENYV K E L N K Q 1 0 1 1 0 1 1 0 0 2 1 1 0 0 0 1 0 0 1 0 0 0 11 0 1292.6612 I3L4C2;Q9UQB8;I3L4A3;I3L526;I3L125;I3L327;I3L1C8;I3L2M4 I3L4C2 194 204 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 2 0.018099 55.064 By MS/MS 1 0 0 0 0 650 893 692 2221 1577 1577 1 ELRDNVITPR GTLFVFWRELRDNVIT RDNVITPRDTTMTFTC R E L P R D 0 2 1 1 0 0 1 0 0 1 1 0 0 0 1 0 1 0 0 1 0 0 10 1 1211.6622 H0Y9V7;B4E2Q0;P98194 H0Y9V7 751 760 ATP2C1 Calcium-transporting ATPase;Calcium-transporting ATPase type 2C member 1 yes no 2 0.012504 59.8 By MS/MS 1 0 0 0 0 651 357 693 2222 1578 1578 3001 1 ELRPEDDMKPGSFDR KNGLTSKRELRPEDDM MKPGSFDRSIPENNIM R E L D R S 0 2 0 3 0 0 2 1 0 0 1 1 1 1 2 1 0 0 0 0 0 0 15 2 1790.8257 P22466 P22466 65 79 GAL Galanin peptides;Galanin;Galanin message-associated peptide yes yes 2 0.016472 47.288 By MS/MS 1 0 0 0 0 652 1187 694 2223 1579 1579 1537 1 ELSDQATASPIVAR DSLDSKGKELSDQATA TASPIVARTDLSNIPG K E L A R T 3 1 0 1 0 1 1 0 0 1 1 0 0 0 1 2 1 0 0 1 0 0 14 0 1456.7522 Q5JSH3 Q5JSH3 88 101 WDR44 WD repeat-containing protein 44 yes yes 2 1.4338E-105 176.43 By MS/MS By MS/MS By MS/MS 1 1 1 6524700 2025900 2354300 2144400 653 1486 695 2224;2225;2226 1580;1581;1582 1582 1994;3404 3 ELSESVQQQSTPVPLISPK SKAEMDLKELSESVQQ PVPLISPKRQIRSRFQ K E L P K R 0 0 0 0 0 3 2 0 0 1 2 1 0 0 3 4 1 0 0 2 0 0 19 0 2066.0895 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 458 476 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.010145 48.848 By MS/MS 1 1185300 0 0 1185300 654 54 696 2227 1583 1583 70 1 ELSLKASPLR VVLASVMKELSLKASP SLKASPLRSETAEGIV K E L L R S 1 1 0 0 0 0 1 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 1 1112.6554 Q86W50 Q86W50 323 332 METTL16 Methyltransferase-like protein 16 yes yes 2 0.010742 66.326 By matching By matching By MS/MS 1 1 1 2914900 957370 1149800 807690 655 1598 697 2228;2229;2230 1584 1584 2184 1 ELSPAALEKR ARGQGSAKELSPAALE SPAALEKRRRRKQERD K E L K R R 2 1 0 0 0 0 2 0 0 0 2 1 0 0 1 1 0 0 0 0 0 0 10 1 1112.619 O75683 O75683 136 145 SURF6 Surfeit locus protein 6 yes yes 2 0.016299 62.464 By matching By MS/MS By matching 1 1 1 1762800 614130 658150 490470 656 1039 698 2231;2232;2233 1585 1585 1397 1 ELSSEPQTPPAQK SRAIRGEKELSSEPQT PQTPPAQKGTVPLPTI K E L Q K G 1 0 0 0 0 2 2 0 0 0 1 1 0 0 3 2 1 0 0 0 0 0 13 0 1410.6991 E9PGC8;P78559 E9PGC8 735 747 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 7.2822E-08 110.15 By matching By MS/MS By matching 1 1 1 3732800 1477500 1198800 1056600 657 582 699 2234;2235;2236 1586 1586 3084 1 ELSSPISPK GRNTSAEKELSSPISP LSSPISPKSLQSDTPT K E L P K S 0 0 0 0 0 0 1 0 0 1 1 1 0 0 2 3 0 0 0 0 0 0 9 0 956.51786 E9PGC8;P78559 E9PGC8 2254 2262 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.017602 61.962 By MS/MS 1 396710 0 396710 0 658 582 700 2237 1587 1587 765;766 1 ELVSSKVSGAQEMVSSAK EKVLADTKELVSSKVS QEMVSSAKDTVATQL_ K E L A K D 2 0 0 0 0 1 2 1 0 0 1 2 1 0 0 5 0 0 0 3 0 0 18 1 1835.9299 K7ER39;K7EL96;K7ERZ3;O60664 K7ER39 144 161 PLIN3 Perilipin-3 yes no 2 0.0033385 68.463 By matching By matching By MS/MS 1 1 1 1359800 491820 504710 363260 659 942 701 2238;2239;2240 1588 1588 1250 1 EMEHNTVCAAGTSPVGEIGEEK INNHLIAKEMEHNTVC VGEIGEEKILPTSETK K E M E K I 2 0 1 0 1 0 5 3 1 1 0 1 1 0 1 1 2 0 0 2 0 0 22 0 2344.0311 P18583;H7C1M2 P18583 1544 1565 SON Protein SON yes no 3 0.0011111 61.976 By MS/MS By MS/MS By MS/MS 2 2 2 29067000 11131000 10483000 7452900 660 1170 702;703 2241;2242;2243;2244;2245;2246 1589;1590;1591;1592;1593 1592 110 1517;3299 5 EMLASDDEEDVSSK ISQKAEIKEMLASDDE DEEDVSSKVEKAYVPK K E M S K V 1 0 0 3 0 0 3 0 0 0 1 1 1 0 0 3 0 0 0 1 0 0 14 0 1553.6403 E7ETM8;E7EUA0;Q0ZGT2 E7ETM8 12 25 NEXN Nexilin yes no 2 0.013552 45.992 By MS/MS By matching 1 1 897590 390510 0 507080 661 543 704 2247;2248 1594 1594 702 0 EMLASDDEEDVSSKVEK ISQKAEIKEMLASDDE DVSSKVEKAYVPKLTG K E M E K A 1 0 0 3 0 0 4 0 0 0 1 2 1 0 0 3 0 0 0 2 0 0 17 1 1909.8463 E7ETM8;E7EUA0;Q0ZGT2 E7ETM8 12 28 NEXN Nexilin yes no 3 0.015601 48.391 By MS/MS 1 1276800 1276800 0 0 662 543 705 2249 1595 1595 702 1 EMVATQQEMMDAQLR GFPERKEREMVATQQE EMMDAQLRLQLRDYCA R E M L R L 2 1 0 1 0 3 2 0 0 0 1 0 3 0 0 0 1 0 0 1 0 0 15 0 1779.7954 P17568 P17568 38 52 NDUFB7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 yes yes 2 0.0046276 57.434 By MS/MS 1 596120 596120 0 0 663 1167 706 2250 1596 1596 109 3297 0 ENASPAPGTTAEEAMSR RASPEPQRENASPAPG TAEEAMSRGPPPAPEG R E N S R G 4 1 1 0 0 0 3 1 0 0 0 0 1 0 2 2 2 0 0 0 0 0 17 0 1717.7577 A0A024RCR6;A0A0G2JK23;P46379;H0Y710;A0A0G2JL47 A0A024RCR6 964 980 BAT3;BAG6 Large proline-rich protein BAG6 yes no 2 0.0018582 60.901 By matching By MS/MS By MS/MS 1 1 1 10951000 2149900 4297500 4503500 664 4 707 2251;2252;2253 1597;1598 1598 0 2 ENATNGVQQLSKK VLQSMSGRENATNGVQ GVQQLSKKEIEDLLRK R E N K K E 1 0 2 0 0 2 1 1 0 0 1 2 0 0 0 1 1 0 0 1 0 0 13 1 1415.7369 Q9P2D1 Q9P2D1 1446 1458 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 2 0.013749 49.482 By MS/MS 1 0 0 0 0 665 1894 708 2254 1599 1599 2670;3527 1 ENDYESISDLQQGR GHHGLVPKENDYESIS ISDLQQGRDITRL___ K E N G R D 0 1 1 2 0 2 2 1 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1652.7278 Q9NWQ8 Q9NWQ8 414 427 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 4.4039E-08 107.11 By MS/MS By MS/MS By MS/MS 1 1 1 18027000 6381100 7232300 4413700 666 1870 709 2255;2256;2257 1600;1601;1602 1600 3918 3 ENELPTTPVKK VPYKRRKKENELPTTP LPTTPVKKDSPKNITL K E N K K D 0 0 1 0 0 0 2 0 0 0 1 2 0 0 2 0 2 0 0 1 0 0 11 1 1254.682 H0YCH1;O75398 H0YCH1 94 104 DEAF1 Deformed epidermal autoregulatory factor 1 homolog yes no 2 0.0086925 75.788 By matching By MS/MS By matching 1 1 1 1599200 560240 741030 297950 667 784 710 2258;2259;2260 1603 1603 3172 1 ENFSPWIQQHGGWEK GFGTKYLKENFSPWIQ QQHGGWEKILGISHEE K E N E K I 0 0 1 0 0 2 2 2 1 1 0 1 0 1 1 1 0 2 0 0 0 0 15 0 1841.8485 K7EMX4;Q9BZR8 K7EMX4 336 350 BCL2L14 Apoptosis facilitator Bcl-2-like protein 14 yes no 3 0.0062776 50.088 By matching By MS/MS 1 1 2391000 0 1905300 485690 668 946 711 2261;2262 1604 1604 0 ENIKPNETSPSFSK QNSPAGNKENIKPNET ETSPSFSKAENKGISP K E N S K A 0 0 2 0 0 0 2 0 0 1 0 2 0 1 2 3 1 0 0 0 0 0 14 1 1576.7733 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700;F8W0B5 H0YH87 685 698 ATXN2 Ataxin-2 no no 2 0.014705 64.374 By matching By MS/MS 1 1 4841000 1970900 2870100 0 669 667;685 712 2263;2264 1605 1605 894;3126 1 ENPPVEDSSDEDDKR YLGDDMKRENPPVEDS SSDEDDKRNQGNLYDK R E N K R N 0 1 1 4 0 0 3 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 15 1 1730.7231 Q8TCJ2 Q8TCJ2 491 505 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 2;3 0.0027587 68.41 By MS/MS By MS/MS By MS/MS 2 2 1 5345200 2131300 2448500 765340 670 1671 713 2265;2266;2267;2268;2269 1606;1607;1608;1609 1606 2292;2293 4 ENQPENSQTPTKK VASFLLSKENQPENSQ NSQTPTKKEHQKAWAL K E N K K E 0 0 2 0 0 2 2 0 0 0 0 2 0 0 2 1 2 0 0 0 0 0 13 1 1499.7216 Q12834 Q12834 98 110 CDC20 Cell division cycle protein 20 homolog yes yes 2 0.00018393 88.163 By matching By MS/MS By matching 1 1 1 2634000 800900 1354800 478300 671 1365 714 2270;2271;2272 1610 1610 3357 1 ENSFGSPLEFR ELSNSPLRENSFGSPL FGSPLEFRNSGPLGTE R E N F R N 0 1 1 0 0 0 2 1 0 0 1 0 0 2 1 2 0 0 0 0 0 0 11 0 1281.599 Q9UQ35 Q9UQ35 1324 1334 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0046034 69.846 By matching By MS/MS By matching 1 1 1 4093400 1257600 1533900 1301900 672 1945 715 2273;2274;2275 1611 1611 2755 1 ENSNNRVEQTGK E N G K 0 1 3 0 0 1 2 1 0 0 0 1 0 0 0 1 1 0 0 1 0 0 12 1 1374.6488 REV__Q5VSF9 yes no 3 0.017886 41.695 By matching By matching By MS/MS 1 1 1 2872100 725820 1191700 954520 + 673 2005 716 2276;2277;2278 1612 1612 2858;3567 1 ENSPSSQSAGLSSINK EQRNTRNRENSPSSQS AGLSSINKEGEEPTKG R E N N K E 1 0 2 0 0 1 1 1 0 1 1 1 0 0 1 6 0 0 0 0 0 0 16 0 1604.7642 A0A0C4DGM5;Q9H2Y7 A0A0C4DGM5 462 477 ZNF106 Zinc finger protein 106 yes no 2 0.011226 47.915 By matching By MS/MS By matching 1 1 1 1750200 589020 672960 488210 674 204 717 2279;2280;2281 1613 1613 285 1 ENVEYIEREESDGEYDEFGRK YGGGFNERENVEYIER EYDEFGRKKKKYRGKA R E N R K K 0 2 1 2 0 0 7 2 0 1 0 1 0 1 0 1 0 0 2 1 0 0 21 2 2592.1252 O95218 O95218 110 130 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3;4 0.010454 49.655 By matching By MS/MS By MS/MS 1 2 2 40890000 15459000 13516000 11915000 675 1060 718 2282;2283;2284;2285;2286 1614;1615 1615 1421 2 ENVSDLTLGPGNSPITR HVDSSSGRENVSDLTL PGNSPITRMNPASGAL R E N T R M 0 1 2 1 0 0 1 2 0 1 2 0 0 0 2 2 2 0 0 1 0 0 17 0 1768.8955 Q6DCA0 Q6DCA0 62 78 AMMECR1L AMMECR1-like protein yes yes 2 8.2742E-06 85.563 By MS/MS By matching By matching 1 1 1 6641100 2591000 2014800 2035300 676 1534 719 2287;2288;2289 1616 1616 2087 1 ENYAELLEDAFLK RPGLSLVKENYAELLE LLEDAFLKNVTAQICI K E N L K N 2 0 1 1 0 0 3 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 13 0 1553.7613 A0A087X0S5;P12109 A0A087X0S5 789 801 COL6A1 Collagen alpha-1(VI) chain yes no 2 4.7891E-06 104.87 By MS/MS By MS/MS By MS/MS 1 1 1 4456000 2165000 1243500 1047500 677 101 720 2290;2291;2292 1617;1618;1619 1618 3 EPAITSQNSPEAR KDLDEKKKEPAITSQN SQNSPEAREERYFTV_ K E P A R E 2 1 1 0 0 1 2 0 0 1 0 0 0 0 2 2 1 0 0 0 0 0 13 0 1398.6739 E5RIS7;P23193 E5RIS7 92 104 TCEA1 Transcription elongation factor A protein 1 yes no 2 2.1677E-11 110.92 By MS/MS By MS/MS By MS/MS 1 1 1 7048000 2818700 2250600 1978700 678 511 721 2293;2294;2295 1620;1621;1622;1623;1624 1622 651 5 EPFTNDRLQLPR ________________ NDRLQLPRNMIENSMF M E P P R N 0 2 1 1 0 1 1 0 0 0 2 0 0 1 2 0 1 0 0 0 0 0 12 1 1484.7736 Q9UIQ6 Q9UIQ6 2 13 LNPEP Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form yes yes 2 0.0126 55.064 By MS/MS 1 0 0 0 0 679 1908 722 2296 1625 1625 3531 1 EPLIPASPK RSLAPEPKEPLIPASP PLIPASPKAEPIWELP K E P P K A 1 0 0 0 0 0 1 0 0 1 1 1 0 0 3 1 0 0 0 0 0 0 9 0 950.54368 Q9Y613 Q9Y613 517 525 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.009877 68.536 By matching By MS/MS By matching 1 1 1 3804900 1223100 1321100 1260700 680 1976 723 2297;2298;2299 1626 1626 2825 1 EPLSSETQYSVDTR HNIDHAQREPLSSETQ TQYSVDTRRPAPQKAL R E P T R R 0 1 0 1 0 1 2 0 0 0 1 0 0 0 1 3 2 0 1 1 0 0 14 0 1610.7424 A6PW57;Q99755;A2A3N6 A6PW57 326 339 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 2 0.010334 53.08 By matching By matching By MS/MS 1 1 1 5387300 1685100 1727800 1974400 681 313 724 2300;2301;2302 1627 1627 3619 1 EPSEVPTPK TALVGSQKEPSEVPTP PSEVPTPKRPRGRPKG K E P P K R 0 0 0 0 0 0 2 0 0 0 0 1 0 0 3 1 1 0 0 1 0 0 9 0 982.49713 P17096 P17096 47 55 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2 0.007129 83.862 By MS/MS 1 0 0 0 0 682 1164 725 2303 1628 1628 1508 1 EQALADLNSVEKSLADLFR VQQLVLEKEQALADLN KSLADLFRRYEKMKEV K E Q F R R 3 1 1 2 0 1 2 0 0 0 4 1 0 1 0 2 0 0 0 1 0 0 19 1 2118.0957 H0Y9C3;A0A0U1RRM9;Q4VXL4;D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359 H0Y9C3 63 81 TACC2 Transforming acidic coiled-coil-containing protein 2 yes no 3 0.017874 44.005 By MS/MS 1 0 0 0 0 683 263 726 2304 1629 1629 346 1 EQDAPAAQGPPRK VSQEKRKREQDAPAAQ AAQGPPRKRASGPGDP R E Q R K R 3 1 0 1 0 2 1 1 0 0 0 1 0 0 3 0 0 0 0 0 0 0 13 1 1363.6844 Q92618 Q92618 467 479 ZNF516 Zinc finger protein 516 yes yes 2 0.017938 37.344 By MS/MS By matching 1 1 1215600 389830 825770 0 684 1699 727 2305;2306 1630 1630 0 EQISDIDDAVR PEQWSQLKEQISDIDD SDIDDAVRKL______ K E Q V R K 1 1 0 3 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 1 0 0 11 0 1259.5994 P53999 P53999 115 125 SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 2 0.0014912 89.886 By matching By MS/MS By MS/MS 1 1 1 1698100 334530 924640 438880 685 1293 728 2307;2308;2309 1631;1632;1633 1631 3 EQMMNSSISSGSGSLR EAKIHDLREQMMNSSI SSGSGSLRTSQKRSLY R E Q L R T 0 1 1 0 0 1 1 2 0 1 1 0 2 0 0 6 0 0 0 0 0 0 16 0 1669.74 E7EQD7;A0A0C4DFT3;Q12959 E7EQD7 562 577 DLG1 Disks large homolog 1 yes no 2 0.0041407 55.258 By MS/MS By matching By MS/MS 1 1 1 1535200 333290 463500 738360 686 180 729 2310;2311;2312 1634;1635 1634 248;249;250 2 EQSEVSVSPR SPDRDKKKEQSEVSVS SEVSVSPRASKHHYSR K E Q P R A 0 1 0 0 0 1 2 0 0 0 0 0 0 0 1 3 0 0 0 2 0 0 10 0 1116.5411 E9PI52;Q7L4I2 E9PI52 25 34 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 2 6.4357E-06 132.56 By MS/MS By MS/MS By MS/MS 1 1 1 12157000 4539500 4410300 3207200 687 585 730 2313;2314;2315 1636;1637;1638;1639;1640;1641 1641 776 6 EQSSDLTPSGDVSPVKPLSR KMKDNEEREQSSDLTP SPVKPLSRSAELEFPL R E Q S R S 0 1 0 2 0 1 1 1 0 0 2 1 0 0 3 5 1 0 0 2 0 0 20 1 2098.0542 Q8WYQ5 Q8WYQ5 365 384 DGCR8 Microprocessor complex subunit DGCR8 yes yes 3 0.018275 41.912 By MS/MS By matching By matching 1 1 1 8348100 2856700 3239200 2252300 688 1692 731 2316;2317;2318 1642 1642 2317 1 EQTSHQIIQQMSLSNK ALSEMTFREQTSHQII QQMSLSNKLEQNQLYG R E Q N K L 0 0 1 0 0 4 1 0 1 2 1 1 1 0 0 3 1 0 0 0 0 0 16 0 1870.9207 Q8N8G6 Q8N8G6 77 92 C15orf54 Putative uncharacterized protein C15orf54 yes yes 3 0.012572 41.542 By MS/MS By matching By matching 1 1 1 2387800 725430 1087800 574510 689 1641 732 2319;2320;2321 1643 1643 2247 0 EQVANSAFVER YYITGESKEQVANSAF ANSAFVERVRKRGFEV K E Q E R V 2 1 1 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 2 0 0 11 0 1248.6099 P08238;Q58FF7 P08238 492 502 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 2.0751E-05 121.6 By MS/MS By MS/MS By MS/MS 1 1 1 4462400 1094900 2858400 509120 690 1126 733 2322;2323;2324 1644;1645;1646 1645 3 EQVKRQWTLS TARKQLDKEQVKRQWT VKRQWTLS________ K E Q L S - 0 1 0 0 0 2 1 0 0 0 1 1 0 0 0 1 1 1 0 1 0 0 10 2 1273.6779 I3L2F2 I3L2F2 34 43 RSL1D1 yes yes 3 0.015117 43.282 By MS/MS 1 0 0 0 0 691 888 734 2325 1647 1647 1195;3203 1 EQWANLEQLSAIRK RERIIYIREQWANLEQ EQLSAIRKKRLEEASL R E Q R K K 2 1 1 0 0 2 2 0 0 1 2 1 0 0 0 1 0 1 0 0 0 0 14 1 1684.8897 A0A087WUZ3;Q01082 A0A087WUZ3 724 737 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.013304 49.216 By MS/MS 1 0 0 0 0 692 45 735 2326 1648 1648 59 1 EQYVPPRSPK GVTRRNGKEQYVPPRS YVPPRSPK________ K E Q P K - 0 1 0 0 0 1 1 0 0 0 0 1 0 0 3 1 0 0 1 1 0 0 10 1 1199.6299 X6RLN4;Q71RC2 X6RLN4 482 491 LARP4 La-related protein 4 yes no 2 0.00015837 116.03 By MS/MS By MS/MS By MS/MS 3 2 4 12035000 4698800 4694700 2641800 693 1569 736 2327;2328;2329;2330;2331;2332;2333;2334;2335 1649;1650;1651;1652;1653;1654 1649 2130 5 ERDHSPTPSVFNSDEER ERTRERERERDHSPTP VFNSDEERYRYREYAE R E R E R Y 0 2 1 2 0 0 3 0 1 0 0 0 0 1 2 3 1 0 0 1 0 0 17 1 2000.8824 Q6UN15 Q6UN15 488 504 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes yes 3 0.00021217 80.41 By MS/MS By MS/MS By matching 2 2 2 17420000 7170900 5700100 4549000 694 1558 737;738 2336;2337;2338;2339;2340;2341 1655;1656;1657;1658 1658 2115;2116;3433 4 ERDTSPDKGELVSDEEEDT AIREDFLRERDTSPDK VSDEEEDT________ R E R D T - 0 1 0 4 0 0 5 1 0 0 1 1 0 0 1 2 2 0 0 1 0 0 19 2 2149.9135 Q9UPU7 Q9UPU7 945 963 TBC1D2B TBC1 domain family member 2B yes yes 3 0.013012 57.788 By matching By matching By MS/MS 1 1 1 7672300 3199500 2384400 2088500 695 1942 739 2342;2343;2344 1659 1659 2748 1 ERDYAEIQDFHR EFRERQARERDYAEIQ AEIQDFHRTFGCDDEL R E R H R T 1 2 0 2 0 1 2 0 1 1 0 0 0 1 0 0 0 0 1 0 0 0 12 1 1577.7223 Q5VWV2;Q8TEW0 Q5VWV2 1017 1028 PARD3 Partitioning defective 3 homolog yes no 3 1.9163E-08 126.34 By MS/MS By MS/MS By MS/MS 1 1 1 5059500 1700900 2101300 1257300 696 1522 740 2345;2346;2347 1660;1661;1662 1660 3862 3 ERESSANNSVSPSESLR NHHELDHRERESSANN VSPSESLRASEKHRGS R E R L R A 1 2 2 0 0 0 3 0 0 0 1 0 0 0 1 6 0 0 0 1 0 0 17 1 1847.8609 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726 H0YKH0 193 209 TLE3 Transducin-like enhancer protein 3 yes no 3 0.00075253 75.912 By MS/MS By MS/MS By matching 1 1 1 6689700 2876800 2090300 1722500 697 659 741 2348;2349;2350 1663;1664;1665 1664 882;883;884 3 ERGTPPVDPK RHAPAMLRERGTPPVD GTPPVDPKLAWVGDVF R E R P K L 0 1 0 1 0 0 1 1 0 0 0 1 0 0 3 0 1 0 0 1 0 0 10 1 1094.572 P48634 P48634 779 788 PRRC2A Protein PRRC2A yes yes 2 0.0025406 106.62 By MS/MS By MS/MS 1 1 3350800 1680600 1670200 0 698 1251 742 2351;2352 1666;1667 1667 3327 2 ERHPSWRSEETQER PKLERRPRERHPSWRS RSEETQERERSRTGSE R E R E R E 0 3 0 0 0 1 4 0 1 0 0 0 0 0 1 2 1 1 0 0 0 0 14 2 1825.8456 E7EX17;P23588 E7EX17 402 415 EIF4B Eukaryotic translation initiation factor 4B yes no 4 0.0085219 50.088 By MS/MS 1 1105800 1105800 0 0 699 556 743 2353 1668 1668 741 1 ERLDGENIYIR IRMRKKKRERLDGENI DGENIYIRHSNLMLED R E R I R H 0 2 1 1 0 0 2 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 11 1 1376.7048 P11171;Q4VB86 P11171 652 662 EPB41 Protein 4.1 yes no 3 9.0837E-06 121.29 By MS/MS By MS/MS By MS/MS 1 1 1 12109000 4977900 3433200 3698000 700 1143 744 2354;2355;2356 1669;1670;1671;1672 1672 3767 4 ERPSSAIYPSDSFR LRSKTTIRERPSSAIY IYPSDSFRQSLLGSRR R E R F R Q 1 2 0 1 0 0 1 0 0 1 0 0 0 1 2 4 0 0 1 0 0 0 14 1 1610.7689 V9GYF5;V9GYG5;V9GZ14;V9GYM8;Q92974 V9GYF5 110 123 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 0.0013274 80.706 By MS/MS By MS/MS By MS/MS 1 1 1 9882800 3273900 3273300 3335600 701 1716 745 2357;2358;2359 1673;1674;1675 1674 2355;2356 3 ERSDSGGSSSEPFDR HPSGLVPRERSDSGGS SSSEPFDRHAPAMLRE R E R D R H 0 2 0 2 0 0 2 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 15 1 1611.6761 P48634 P48634 757 771 PRRC2A Protein PRRC2A yes yes 3 0.010517 48.51 By matching By MS/MS 1 1 1755500 0 933640 821870 702 1251 746 2360;2361 1676 1676 1638;1639 1 ERSMSENAVR RAVGRLKRERSMSENA SMSENAVRQN______ R E R V R Q 1 2 1 0 0 0 2 0 0 0 0 0 1 0 0 2 0 0 0 1 0 0 10 1 1177.551 C9JHF5;H7C433;A0A0A0MS29;Q9GZY8 C9JHF5 127 136 MFF Mitochondrial fission factor yes no 2 0.0065639 63.32 By MS/MS 1 0 0 0 0 703 143 747 2362 1677 1677 13 193 1 ERSPALKSPLQSVVVR AVSELSPRERSPALKS PLQSVVVRRRSPRPSP R E R V R R 1 2 0 0 0 1 1 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 16 2 1765.021 Q9Y2W1 Q9Y2W1 246 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 5.5982E-08 97.767 By MS/MS By MS/MS By MS/MS 1 1 1 49403000 18093000 17735000 13576000 704 1960 748 2363;2364;2365 1678;1679;1680;1681 1680 2796;2797;2798 4 ERSPSPLRGNVVPSPLPTR LLDTPRSRERSPSPLR VPSPLPTRRTRTFSAT R E R T R R 0 3 1 0 0 0 1 1 0 0 2 0 0 0 5 3 1 0 0 2 0 0 19 2 2058.1334 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 28 46 CARHSP1 Calcium-regulated heat stable protein 1 yes no 3 0.0077447 48.372 By MS/MS 1 4060400 0 4060400 0 705 826 749 2366 1682 1682 1108;1109;1110 1 ERSPSPPTIQSK RKRRRMLRERSPSPPT SPPTIQSKRQTPSPRL R E R S K R 0 1 0 0 0 1 1 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 12 1 1325.6939 H7C3B5;H0Y613;Q14687 H7C3B5 26 37 GSE1 Genetic suppressor element 1 yes no 2 0.006096 73.219 By MS/MS 1 0 0 0 0 706 762 750 2367 1683 1683 1042;1043 1 ESAEPPLTQSDK TLHLCSAKESAEPPLT PPLTQSDKRETSHTTA K E S D K R 1 0 0 1 0 1 2 0 0 0 1 1 0 0 2 2 1 0 0 0 0 0 12 0 1300.6147 Q86TB3 Q86TB3 569 580 ALPK2 Alpha-protein kinase 2 yes yes 2 0.0026068 73.985 By MS/MS By matching By matching 1 1 1 5509700 1809000 1767000 1933600 707 1589 751 2368;2369;2370 1684 1684 2168 1 ESCSSPSTVGSSLTTR TPQQQKCRESCSSPST VGSSLTTRKIDPPAVP R E S T R K 0 1 0 0 1 0 1 1 0 0 1 0 0 0 1 6 3 0 0 1 0 0 16 0 1654.7468 E9PMC9;Q7Z589;H0YEP9 E9PMC9 1111 1126 C11orf30;EMSY Protein EMSY yes no 2 0.012622 46.985 By MS/MS By matching By matching 1 1 1 1941500 615400 671310 654830 708 608 752 2371;2372;2373 1685 1685 814 1 ESDQTLAALLSPK TEEPLPVKESDQTLAA LAALLSPKESSGGEKE K E S P K E 2 0 0 1 0 1 1 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 13 0 1371.7246 P18583;H7C1M2 P18583 1687 1699 SON Protein SON yes no 2 2.5468E-12 118.52 By MS/MS By MS/MS By MS/MS 1 1 1 2319800 710290 855020 754530 709 1170 753 2374;2375;2376 1686;1687;1688 1687 1518 3 ESDTKNEVNGTSEDIKSEGDTQSN EDTNTESKESDTKNEV SEGDTQSN________ K E S S N - 0 0 3 3 0 1 4 2 0 1 0 2 0 0 0 4 3 0 0 1 0 0 24 2 2583.1056 O95232 O95232 409 432 LUC7L3 Luc7-like protein 3 yes yes 3 0.0085853 51.386 By MS/MS By matching 1 1 8562700 4268500 4294200 0 710 1061 754 2377;2378 1689 1689 1424 1 ESESAPGDFSLSVK HDGAFLIRESESAPGD GDFSLSVKFGNDVQHF R E S V K F 1 0 0 1 0 0 2 1 0 0 1 1 0 1 1 4 0 0 0 1 0 0 14 0 1451.678 P62993;J3KT38 P62993 87 100 GRB2 Growth factor receptor-bound protein 2 yes no 2 0.010188 58.511 By MS/MS By MS/MS By matching 1 1 1 9638700 7317000 1291900 1029800 711 1316 755 2379;2380;2381 1690;1691 1690 2 ESETNKGAFSLSVK KAGSFLIRESETNKGA GAFSLSVKDVTTQGEL R E S V K D 1 0 1 0 0 0 2 1 0 0 1 2 0 1 0 3 1 0 0 1 0 0 14 1 1495.7518 E9PJX5;P51451 E9PJX5 81 94 BLK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Blk yes no 3 0.014874 40.725 By matching By MS/MS 1 1 10786000 5937600 0 4848400 712 595 756 2382;2383 1692 1692 790;3096 1 ESFGGSSEIVDQLEVEIR EKLVIQLKESFGGSSE DQLEVEIRNMTLLVEK K E S I R N 0 1 0 1 0 1 4 2 0 2 1 0 0 1 0 3 0 0 0 2 0 0 18 0 1992.964 Q6UX06 Q6UX06 175 192 OLFM4 Olfactomedin-4 yes yes 2;3 6.7968E-13 123.28 By MS/MS By MS/MS By MS/MS 3 4 3 37403000 18198000 8312200 10893000 713 1561 757 2384;2385;2386;2387;2388;2389;2390;2391;2392;2393 1693;1694;1695;1696;1697;1698 1694 6 ESKEEETSIDVAGKPNEVTK QKANEQKKESKEEETS GKPNEVTKAAESPDQK K E S T K A 1 0 1 1 0 0 5 1 0 1 0 3 0 0 1 2 2 0 0 2 0 0 20 2 2189.0699 P53985 P53985 460 479 SLC16A1 Monocarboxylate transporter 1 yes yes 3 0.0083095 61.015 By matching By MS/MS By matching 1 1 1 35303000 11726000 14570000 9007100 714 1292 758 2394;2395;2396 1699 1699 1705 1 ESKGSPVFLPR AAAKMDGKESKGSPVF GSPVFLPRKENSSVEA K E S P R K 0 1 0 0 0 0 1 1 0 0 1 1 0 1 2 2 0 0 0 1 0 0 11 1 1215.6612 J3QSD7;Q9NYV4 J3QSD7 418 428 CDK12 Cyclin-dependent kinase 12 yes no 2 0.018788 63.944 By matching By MS/MS By matching 1 1 1 4965300 1899900 1504100 1561300 715 926 759 2397;2398;2399 1700 1700 1236 0 ESLCDSPHQNLSRPLLENK NYRNESARESLCDSPH SRPLLENKLKAFSIGK R E S N K L 0 1 2 1 1 1 2 0 1 0 4 1 0 0 2 3 0 0 0 0 0 0 19 1 2236.0906 U3KPT1;C9JDJ7;C9J5L1;E7EW00;H0Y8D9;E7ET15;O15042 U3KPT1 42 60 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 3 0.011534 46.121 By matching By matching By MS/MS 1 1 1 7480100 2742900 2295500 2441700 716 415 760 2400;2401;2402 1701 1701 552 1 ESLKEEDESDDDNM EEAEKYAKESLKEEDE DESDDDNM________ K E S N M - 0 0 1 4 0 0 4 0 0 0 1 1 1 0 0 2 0 0 0 0 0 0 14 1 1654.6152 H0YJ03;G3V4X5;P25788 H0YJ03 70 83 PSMA3 Proteasome subunit alpha type-3 yes no 2 0 233.28 By MS/MS By MS/MS By MS/MS 1 1 1 188290000 58541000 68473000 61275000 717 723 761 2403;2404;2405 1702;1703;1704 1702 975;976 3 ESLSTHTSPSQSPNSVHGSR NKLTSASKESLSTHTS PNSVHGSRRGSISSMS K E S S R R 0 1 1 0 0 1 1 1 2 0 1 0 0 0 2 7 2 0 0 1 0 0 20 0 2093.9726 Q9H1K0 Q9H1K0 208 227 RBSN Rabenosyn-5 yes yes 3 0.0070764 46.494 By MS/MS By MS/MS 1 1 1694300 660820 1033500 0 718 1814 762 2406;2407 1705;1706 1706 2540;2541;2542;3498;3499 2 ESNIQTMGGKTFK TNKFTVGKESNIQTMG TMGGKTFKATVQMEGG K E S F K A 0 0 1 0 0 1 1 2 0 1 0 2 1 1 0 1 2 0 0 0 0 0 13 1 1439.7079 P51161 P51161 69 81 FABP6 Gastrotropin yes yes 2 0.009654 41.283 By MS/MS 1 243670 243670 0 0 719 1275 763 2408 1707 1707 1681;3334;3335 1 ESNYFGLSPEER EDFDHTSRESNYFGLS FGLSPEERREKQAIEE R E S E R R 0 1 1 0 0 0 3 1 0 0 1 0 0 1 1 2 0 0 1 0 0 0 12 0 1426.6365 Q01804 Q01804 436 447 OTUD4 OTU domain-containing protein 4 yes yes 2 0.0021816 76.262 By matching By MS/MS By matching 1 1 1 1234500 294190 474890 465460 720 1332 764 2409;2410;2411 1708 1708 1739 1 ESPGPIGLSTEK E S E K 0 0 0 0 0 0 2 2 0 1 1 1 0 0 2 2 1 0 0 0 0 0 12 0 1213.619 REV__E5RHI8 yes yes 2 0.0056133 67.879 By MS/MS By matching By MS/MS 2 1 2 20041000 7979000 3195100 8867200 + 721 1989 765 2412;2413;2414;2415;2416 1709;1710 1710 2844 2 ESRSVHNHLTSAP MQARMLFKESRSVHNH HNHLTSAP________ K E S A P - 1 1 1 0 0 0 1 0 2 0 1 0 0 0 1 3 1 0 0 1 0 0 13 1 1433.7011 H7C4P8 H7C4P8 432 444 UBN2 yes yes 2 0.014193 45.158 By MS/MS By matching By matching 1 1 1 2824600 1125100 816600 882880 722 876 766 2417;2418;2419 1711 1711 1176 0 ESSANNSVSPSESLR HELDHRERESSANNSV VSPSESLRASEKHRGS R E S L R A 1 1 2 0 0 0 2 0 0 0 1 0 0 0 1 6 0 0 0 1 0 0 15 0 1562.7172 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726 H0YKH0 195 209 TLE3 Transducin-like enhancer protein 3 yes no 2 6.7856E-05 85.28 By MS/MS By MS/MS By MS/MS 1 1 1 20707000 7438100 7394000 5875000 723 659 767 2420;2421;2422 1712;1713;1714 1712 882;883;884 3 ESSIIAPAPAEDVDTPPR QVYEFRVKESSIIAPA EDVDTPPRKKKRKHRL K E S P R K 3 1 0 2 0 0 2 0 0 2 0 0 0 0 4 2 1 0 0 1 0 0 18 0 1863.9214 Q15910 Q15910 473 490 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 2;3 0.0011439 79.514 By MS/MS By matching By matching 2 2 1 10519000 4489200 3667800 2361800 724 1452 768 2423;2424;2425;2426;2427 1715;1716 1716 3388 2 ESSIIAPAPAEDVDTPPRKK QVYEFRVKESSIIAPA VDTPPRKKKRKHRLWA K E S K K K 3 1 0 2 0 0 2 0 0 2 0 2 0 0 4 2 1 0 0 1 0 0 20 2 2120.1113 Q15910 Q15910 473 492 EZH2 Histone-lysine N-methyltransferase EZH2 yes yes 3 4.1965E-05 80.638 By matching By MS/MS By matching 1 1 1 3046400 1337300 992720 716460 725 1452 769 2428;2429;2430 1717 1717 3388 1 ESSPIPSPTSDRK TEQRTSSKESSPIPSP PSPTSDRKAKTALPAQ K E S R K A 0 1 0 1 0 0 1 0 0 1 0 1 0 0 3 4 1 0 0 0 0 0 13 1 1399.6943 A0A087WUZ3;Q01082 A0A087WUZ3 2165 2177 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.0085826 56.872 By MS/MS 1 0 0 0 0 726 45 770 2431 1718 1718 60;61;2877 1 ESSPPREEAPPPPPPTEDSCAK RQQSQPAKESSPPREE PTEDSCAKKPRSRTKI K E S A K K 2 1 0 1 1 0 4 0 0 0 0 1 0 0 8 3 1 0 0 0 0 0 22 1 2374.0747 C9JR56;Q9UPW6 C9JR56 533 554 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 yes no 3 0.018062 41.257 By MS/MS 1 1012700 0 0 1012700 727 444 771 2432 1719 1719 583 1 ESSRPVK TTKLGQRRESSRPVKP RESSRPVKPPKKDVPD R E S V K P 0 1 0 0 0 0 1 0 0 0 0 1 0 0 1 2 0 0 0 1 0 0 7 1 801.43447 M0QZD9;O60885 M0QZD9 323 329 BRD4 Bromodomain-containing protein 4 yes no 2 0.0083082 79.986 By MS/MS 1 0 0 0 0 728 964 772 2433 1720 1720 1269 1 ESTSSKSPPR EMFETAIKESTSSKSP TSSKSPPRKINSSPNV K E S P R K 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 4 1 0 0 0 0 0 10 1 1074.5306 P78347 P78347 817 826 GTF2I General transcription factor II-I yes yes 2;3 0.0019776 104.17 By matching By MS/MS By MS/MS 2 2 1 46972000 11963000 26498000 8511500 729 1321 773 2434;2435;2436;2437;2438 1721;1722;1723 1723 1722;1723;1724 3 ESVNSPVFGK EKEKRTSKESVNSPVF VNSPVFGKASLLTGGL K E S G K A 0 0 1 0 0 0 1 1 0 0 0 1 0 1 1 2 0 0 0 2 0 0 10 0 1062.5346 E7ESJ3;Q9UPS8 E7ESJ3 643 652 ANKRD26 Ankyrin repeat domain-containing protein 26 yes no 2 0.0036873 77.124 By matching By matching By MS/MS 1 1 1 1407200 391190 599260 416730 730 538 774 2439;2440;2441 1724 1724 695 1 ESVPEFPLSPPK LILSPRSKESVPEFPL EFPLSPPKKKDLSLEE K E S P K K 0 0 0 0 0 0 2 0 0 0 1 1 0 1 4 2 0 0 0 1 0 0 12 0 1325.6867 A2A2D0;P16949 A2A2D0 30 41 STMN1 Stathmin yes no 2 8.5574E-39 157.09 By MS/MS By MS/MS By MS/MS 1 1 1 26737000 16380000 5882700 4473900 731 293 775 2442;2443;2444 1725;1726;1727;1728;1729;1730;1731;1732;1733 1726 389 9 ESVPEFPLSPPKKK LILSPRSKESVPEFPL PLSPPKKKDLSLEEIQ K E S K K D 0 0 0 0 0 0 2 0 0 0 1 3 0 1 4 2 0 0 0 1 0 0 14 2 1581.8766 A2A2D0;P16949 A2A2D0 30 43 STMN1 Stathmin yes no 3 0.0012159 82.349 By matching By MS/MS By MS/MS 1 2 1 4892000 2137500 1344900 1409600 732 293 776 2445;2446;2447;2448 1734;1735 1735 389 2 ESYSVYVYK KKRKRSRKESYSVYVY SYSVYVYKVLKQVHPD K E S Y K V 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 3 2 0 0 9 0 1136.539 U3KQK0;Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814 U3KQK0 36 44 HIST1H2BN;HIST1H2BL;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK Histone H2B;Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K yes no 2 0.012417 73.665 By MS/MS By matching By MS/MS 1 1 1 5368200 2524300 1705200 1138800 733 1026 777 2449;2450;2451 1736;1737 1737 2 ETEPLVSPHQDK KKSESPFRETEPLVSP LVSPHQDKLMSMPVMT R E T D K L 0 0 0 1 0 1 2 0 1 0 1 1 0 0 2 1 1 0 0 1 0 0 12 0 1378.6729 H7BZ93;C9JG86;H7BXT4;H7C3H4;Q9BYW2 H7BZ93 466 477 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.00050729 87.831 By matching By MS/MS By matching 1 1 1 1674200 437520 691440 545260 734 434 778 2452;2453;2454 1738 1738 571 1 ETERASPIK AKDVTLLKETERASPI TERASPIKMDLAPSKD K E T I K M 1 1 0 0 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 0 0 0 9 1 1029.5455 E7EVA0;P27816 E7EVA0 370 378 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.00025561 99.343 By MS/MS By MS/MS 1 1 2165300 2165300 0 0 735 551 779 2455;2456 1739;1740 1740 727;3072 2 ETERASPIKMDLAPSK AKDVTLLKETERASPI KMDLAPSKDMGPPKEN K E T S K D 2 1 0 1 0 0 2 0 0 1 1 2 1 0 2 2 1 0 0 0 0 0 16 2 1771.9138 E7EVA0;P27816 E7EVA0 370 385 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 5.5381E-07 94.487 By MS/MS By MS/MS By MS/MS 2 2 2 32207000 12669000 10832000 8705300 736 551 780;781 2457;2458;2459;2460;2461;2462 1741;1742;1743;1744;1745;1746 1743 39 727;3072 6 ETPHSPGVEDAPIAK PAQLANARETPHSPGV VEDAPIAKVGVLAASM R E T A K V 2 0 0 1 0 0 2 1 1 1 0 1 0 0 3 1 1 0 0 1 0 0 15 0 1546.7627 F8VS07;F8VQE1;Q9UHB6 F8VS07 183 197 LIMA1 LIM domain and actin-binding protein 1 yes no 2;3 9.299E-17 111.88 By MS/MS By MS/MS By MS/MS 1 2 2 95164000 17212000 42179000 35773000 737 666 782 2463;2464;2465;2466;2467 1747;1748;1749;1750;1751 1751 892 5 ETPPNGNLSPAPR KGKLGGPKETPPNGNL GNLSPAPRLRRDYSYE K E T P R L 1 1 2 0 0 0 1 1 0 0 1 0 0 0 4 1 1 0 0 0 0 0 13 0 1348.6735 P48634 P48634 996 1008 PRRC2A Protein PRRC2A yes yes 2 0.0045842 70.977 By MS/MS By MS/MS By MS/MS 2 2 2 11615000 3696800 4051000 3866900 738 1251 783;784 2468;2469;2470;2471;2472;2473 1752;1753;1754;1755 1752 1640 4 ETQSPEQVKSEK SERITVKKETQSPEQV PEQVKSEKLKDLFDYS K E T E K L 0 0 0 0 0 2 3 0 0 0 0 2 0 0 1 2 1 0 0 1 0 0 12 1 1388.6783 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 493 504 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 2.4724E-50 161.87 By MS/MS By MS/MS By MS/MS 1 1 1 16002000 6737000 6401000 2863900 739 596 785 2474;2475;2476 1756;1757;1758;1759;1760;1761 1757 794;3097 6 ETSAATLSPGASSR LEVSPGSRETSAATLS LSPGASSRGWDDGDTR R E T S R G 3 1 0 0 0 0 1 1 0 0 1 0 0 0 1 4 2 0 0 0 0 0 14 0 1333.6474 A0A087WTU3;Q9Y6I9 A0A087WTU3 163 176 TEX264 Testis-expressed sequence 264 protein yes no 2 0.018813 61.409 By matching By MS/MS By matching 1 1 1 5854100 3827100 1080100 946890 740 29 786 2477;2478;2479 1762 1762 32 0 ETSFGSSENITMTSLSK ATSILQKKETSFGSSE ITMTSLSKVTTFVSED K E T S K V 0 0 1 0 0 0 2 1 0 1 1 1 1 1 0 5 3 0 0 0 0 0 17 0 1817.8353 Q9UMZ2;A0A087WZS7 Q9UMZ2 930 946 SYNRG Synergin gamma yes no 2 0.0026999 57.148 By matching By MS/MS By MS/MS 1 1 1 4552700 1450800 1590500 1511500 741 1935 787 2480;2481;2482 1763;1764 1763 174 2733;3535;3536 2 ETSVSKEDTDHEEK SDVEVEEKETSVSKED EDTDHEEKASNEDVTK K E T E K A 0 0 0 2 0 0 4 0 1 0 0 2 0 0 0 2 2 0 0 1 0 0 14 1 1632.7115 O75475 O75475 114 127 PSIP1 PC4 and SFRS1-interacting protein yes yes 2;3 0.00011082 93.738 By MS/MS By MS/MS By MS/MS 2 3 1 5577100 1007200 1501100 3068800 742 1034 788 2483;2484;2485;2486;2487;2488 1765;1766;1767;1768 1768 3251 4 ETVSEESNVLCLSK SDPVVSYRETVSEESN SNVLCLSKSPNKHNRL R E T S K S 0 0 1 0 1 0 3 0 0 0 2 1 0 0 0 3 1 0 0 2 0 0 14 0 1593.7556 P13639 P13639 581 594 EEF2 Elongation factor 2 yes yes 2 0.016158 53.034 By matching By MS/MS By matching 1 1 1 1439600 349910 815650 274010 743 1154 789 2489;2490;2491 1769 1769 1 EVDEDSEPEREVR FVRVKREREVDEDSEP SEPEREVRAKNGRVDS R E V V R A 0 2 0 2 0 0 5 0 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 1 1587.7013 F8WC91;B9A018;Q53GS9 F8WC91 77 89 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 2 2.9155E-07 106.29 By matching By matching By MS/MS 1 1 1 17917000 7541900 6204300 4171300 744 389 790 2492;2493;2494 1770 1770 512 1 EVDEQMLNVQNK FRGRMSMKEVDEQMLN QMLNVQNKNSSYFVEW K E V N K N 0 0 2 1 0 2 2 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 12 0 1445.682 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 Q5JP53 307 318 TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain no no 2 8.0925E-20 145.72 By MS/MS By MS/MS By MS/MS 2 2 1 14391000 4284700 7855300 2251200 745 1118;1319 791;792 2495;2496;2497;2498;2499 1771;1772;1773;1774;1775 1772 89 5 EVDYSGLR EWKELEQKEVDYSGLR EVDYSGLRVQAMQISS K E V L R V 0 1 0 1 0 0 1 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 8 0 937.45051 Q9UKY7;H0Y8K3 Q9UKY7 92 99 CDV3 Protein CDV3 homolog yes no 2 0.013219 77.923 By MS/MS By MS/MS 1 1 2160500 1061300 0 1099100 746 1920 793 2500;2501 1776;1777 1777 3930 2 EVEDKESEGEEEDEDEDLSK VGPASILKEVEDKESE DEDEDLSKYKLDEDED K E V S K Y 0 0 0 4 0 0 9 1 0 0 1 2 0 0 0 2 0 0 0 1 0 0 20 1 2338.9296 O95218 O95218 147 166 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2;3 9.8323E-13 89.507 By matching By MS/MS By MS/MS 2 2 2 129380000 32400000 62771000 34209000 747 1060 794 2502;2503;2504;2505;2506;2507 1778;1779 1779 1422 2 EVEDKESEGEEEDEDEDLSKYK VGPASILKEVEDKESE DEDLSKYKLDEDEDED K E V Y K L 0 0 0 4 0 0 9 1 0 0 1 3 0 0 0 2 0 0 1 1 0 0 22 2 2630.0879 O95218 O95218 147 168 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 3 3.4353E-11 88.471 By matching By MS/MS By MS/MS 1 1 1 22655000 7943000 9000500 5711100 748 1060 795 2508;2509;2510 1780;1781 1781 1422 2 EVEPEPTEDKDLEADEEDTR ETQPSETKEVEPEPTE EADEEDTRKKDASDDL K E V T R K 1 1 0 4 0 0 7 0 0 0 1 1 0 0 2 0 2 0 0 1 0 0 20 1 2345.003 P20042 P20042 43 62 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 3 0.0012623 61.815 By MS/MS By matching By matching 1 1 1 3214100 940080 1096400 1177600 749 1179 796 2511;2512;2513 1782 1782 1 EVFEDAAEIR KVTQDELKEVFEDAAE FEDAAEIRLVSKDGKS K E V I R L 2 1 0 1 0 0 3 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 10 0 1177.5615 P19338;H7BY16 P19338 411 420 NCL Nucleolin yes no 2 0.0067723 75.378 By MS/MS By MS/MS 1 1 3005900 0 2514800 491100 750 1175 797 2514;2515 1783;1784 1784 2 EVGTPHGIILDSVDAAFICPGSSR GYPKRLEKEVGTPHGI FICPGSSRLHIMAGRR K E V S R L 2 1 0 2 1 0 1 3 1 3 1 0 0 1 2 3 1 0 0 2 0 0 24 0 2497.2271 P02790 P02790 348 371 HPX Hemopexin yes yes 3 0.00019322 56.488 By MS/MS By MS/MS By matching 1 1 1 3634300 1766200 1350800 517390 751 1098 798 2516;2517;2518 1785;1786 1786 2 EVIEIEDASPTKCPITTK EREREKLREVIEIEDA TKCPITTKLVLDEDEE R E V T K L 1 0 0 1 1 0 3 0 0 3 0 2 0 0 2 1 3 0 0 1 0 0 18 1 2030.0242 P46100 P46100 1519 1536 ATRX Transcriptional regulator ATRX yes yes 2 0.01026 53.967 By matching By MS/MS By matching 1 1 1 4791600 1800900 1556500 1434100 752 1243 799 2519;2520;2521 1787 1787 1619 1 EVIKSPTASR KEGDFVYKEVIKSPTA IKSPTASRISLGKKVK K E V S R I 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 2 1 0 0 1 0 0 10 1 1086.6033 O94885 O94885 438 447 SASH1 SAM and SH3 domain-containing protein 1 yes yes 2 0.0070523 72.705 By MS/MS By matching By matching 1 1 1 1445700 528190 445590 471960 753 1055 800 2522;2523;2524 1788 1788 1417 0 EVISSVPK NLIRHKLKEVISSVPK EVISSVPKPPEDKPED K E V P K P 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 2 0 0 0 2 0 0 8 0 857.48583 Q5RL73 Q5RL73 339 346 RBM48 RNA-binding protein 48 yes yes 2 0.013509 82.671 By MS/MS 1 1308200 0 1308200 0 754 1495 801 2525 1789 1789 2011;2012 1 EVMSPTGSAR ECKKAQPKEVMSPTGS MSPTGSARGRSRVMPY K E V A R G 1 1 0 0 0 0 1 1 0 0 0 0 1 0 1 2 1 0 0 1 0 0 10 0 1033.4862 H0YHB7;O43347 H0YHB7 120 129 MSI1 RNA-binding protein Musashi homolog 1 yes no 2 0.013953 57.885 By matching By MS/MS 1 1 1578000 607720 970260 0 755 796 802 2526;2527 1790 1790 1084 1 EVPSKEEPSPVKAEVAEK TKPSVTEKEVPSKEEP VKAEVAEKQATDVKPK K E V E K Q 2 0 0 0 0 0 5 0 0 0 0 3 0 0 3 2 0 0 0 3 0 0 18 2 1952.0102 P46821;D6RA40;D6RA32 P46821 606 623 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 3 0.013443 56.407 By MS/MS By matching By matching 1 1 1 9226800 4558600 2846900 1821300 756 1245 803 2528;2529;2530 1791 1791 1623 1 EVQAEQPSSSSPR KEKEKADREVQAEQPS QPSSSSPRRKTVKEKD R E V P R R 1 1 0 0 0 2 2 0 0 0 0 0 0 0 2 4 0 0 0 1 0 0 13 0 1400.6532 Q9Y388 Q9Y388 178 190 RBMX2 RNA-binding motif protein, X-linked 2 yes yes 2 4.665E-48 159.12 By MS/MS By MS/MS By MS/MS 1 1 1 5659000 2126500 1682600 1849900 757 1964 804 2531;2532;2533 1792;1793;1794;1795;1796;1797;1798;1799 1799 2809;2810;2811 8 EVSFQSTGESEWK ESDIFSIREVSFQSTG STGESEWKDTNYTLNT R E V W K D 0 0 0 0 0 1 3 1 0 0 0 1 0 1 0 3 1 1 0 1 0 0 13 0 1512.6733 I3L3Q7;I3L3B0;Q07021 I3L3Q7 104 116 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 2 0.009051 75.589 By matching By MS/MS By MS/MS 1 1 1 1599000 421970 666970 510030 758 890 805 2534;2535;2536 1800;1801 1800 1196;3204 2 EVTSDSGSIVVSGLTPGVEYVYTIQVLR SQGGEAPREVTSDSGS VYTIQVLRDGQERDAP R E V L R D 0 1 0 1 0 1 2 3 0 2 2 0 0 0 1 4 3 0 2 6 0 0 28 0 2967.5441 P02751 P02751 1130 1157 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 3 0.0040505 41.06 By matching By MS/MS 1 2 17661000 2721800 0 14939000 759 1095 806 2537;2538;2539 1802;1803 1802 2 EVVEEAENGR TKDLKEKKEVVEEAEN VEEAENGRDAPANGNA K E V G R D 1 1 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 10 0 1130.5204 B8ZZQ6;B8ZZA1;B8ZZW7;H7C2N1;P06454 B8ZZQ6 22 31 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 2 0.0074901 59.35 By MS/MS 1 0 0 0 0 760 384 807 2540 1804 1804 23 1 EVYELLDSPGK KLYEGKTKEVYELLDS ELLDSPGKVLLQSKDQ K E V G K V 0 0 0 1 0 0 2 1 0 0 2 1 0 0 1 1 0 0 1 1 0 0 11 0 1248.6238 E9PBS1;P22234 E9PBS1 20 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 1.2346E-05 128.6 By MS/MS By matching By MS/MS 2 1 2 6843800 2979200 1012900 2851700 761 561 808 2541;2542;2543;2544;2545 1805;1806 1805 747;3671 2 EVYMTPLR QNEDEKNKEVYMTPLR EVYMTPLRGVKATQAS K E V L R G 0 1 0 0 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 1 0 0 8 0 1007.511 Q9BPX3 Q9BPX3 927 934 NCAPG Condensin complex subunit 3 yes yes 2 0.013534 49.097 By matching By MS/MS By matching 1 1 1 1364200 443030 458380 462760 762 1773 809 2546;2547;2548 1807 1807 3904 1 EWFWDLATGTMK VLFFQGDREWFWDLAT DLATGTMKERSWPAVG R E W M K E 1 0 0 1 0 0 1 1 0 0 1 1 1 1 0 0 2 2 0 0 0 0 12 0 1483.6806 P02790;Q9BS19 P02790 167 178 HPX Hemopexin yes no 2 0.0026131 90.827 By MS/MS By MS/MS 1 1 3567800 0 1884800 1683000 763 1098 810 2549;2550 1808;1809 1809 84 2 EWNGVVSESDSPVK PPPKAALKEWNGVVSE SESDSPVKRPGRKAAR K E W V K R 0 0 1 1 0 0 2 1 0 0 0 1 0 0 1 3 0 1 0 3 0 0 14 0 1531.7155 M0R0Q7;P18858;M0QY71;M0R1G7;B4E135;F5GZ28 M0R0Q7 41 54 LIG1 DNA ligase;DNA ligase 1 yes no 2 7.2795E-28 143.93 By MS/MS By MS/MS By MS/MS 1 1 1 5728600 1897800 2239700 1591100 764 967 811 2551;2552;2553 1810;1811;1812 1811 1275;1276 3 EWVTQASGVWFAK IDTGIHSREWVTQASG ASGVWFAKKITQDYGQ R E W A K K 2 0 0 0 0 1 1 1 0 0 0 1 0 1 0 1 1 2 0 2 0 0 13 0 1507.746 C9JUZ4;C9JUF9;P15085 C9JUZ4 94 106 CPA1 Carboxypeptidase A1 yes no 2 0.0089294 67.207 By matching By MS/MS By matching 1 1 1 1193700 481000 318350 394370 765 449 812 2554;2555;2556 1813 1813 1 EYAENIGDGRSPEFR KIVRHIIKEYAENIGD DGRSPEFRENEQKRIL K E Y F R E 1 2 1 1 0 0 3 2 0 1 0 0 0 1 1 1 0 0 1 0 0 0 15 1 1738.7911 A0A087WUB9;Q8WYA6 A0A087WUB9 540 554 CTNNBL1 Beta-catenin-like protein 1 yes no 3 0.013008 46.704 By MS/MS By matching 1 1 2424900 0 1327400 1097400 766 38 813 2557;2558 1814 1814 43 1 EYALKQIEGTGISMSACR ________________ GISMSACREIALLREL K E Y C R E 2 1 0 0 1 1 2 2 0 2 1 1 1 0 0 2 1 0 1 0 0 0 18 1 2012.9659 H0YDW9;Q9BWU1 H0YDW9 6 23 CDK19 Cyclin-dependent kinase 19 yes no 2 0.014155 45.257 By MS/MS 1 0 0 0 0 767 787 814 2559 1815 1815 1072;3710 1 EYDQLYEEYTR QQYQDKSREYDQLYEE QLYEEYTRTSQGLLGS R E Y T R T 0 1 0 1 0 1 3 0 0 0 1 0 0 0 0 0 1 0 3 0 0 0 11 0 1507.6467 E9PFP1;O00459 E9PFP1 459 469 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta yes no 2 0.0066308 67.704 By MS/MS By MS/MS By MS/MS 1 1 1 2954300 1201700 1005200 747430 768 576 815 2560;2561;2562 1816;1817;1818 1816 3676;3677 3 EYFTFPASK IPTQTYTREYFTFPAS YFTFPASKSQDRMAPP R E Y S K S 1 0 0 0 0 0 1 0 0 0 0 1 0 2 1 1 1 0 1 0 0 0 9 0 1088.5179 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1188 1196 MLLT4 Afadin yes no 2 0.0080646 73.985 By MS/MS By MS/MS By MS/MS 1 1 1 8573000 3215800 2926000 2431300 769 316 816 2563;2564;2565 1819;1820;1821 1821 3620 3 EYIPGQPPLSQSSDSSPTR QYKEKTGKEYIPGQPP SSDSSPTRNSEPAGLE K E Y T R N 0 1 0 1 0 2 1 1 0 1 1 0 0 0 4 5 1 0 1 0 0 0 19 0 2044.9702 V9GYZ6;P07814 V9GYZ6 878 896 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2;3 1.0924E-58 144.17 By MS/MS By MS/MS By MS/MS 2 2 2 130990000 47784000 40294000 42915000 770 1121 817 2566;2567;2568;2569;2570;2571 1822;1823;1824;1825;1826;1827;1828;1829;1830;1831 1824 1463;1464;1465;1466;3279 10 EYSPPYAPSHQQYPPSHATPLPK EKGHRKYREYSPPYAP SHATPLPKKAYSKMDS R E Y P K K 2 0 0 0 0 2 1 0 2 0 1 1 0 0 7 3 1 0 3 0 0 0 23 0 2591.2445 Q9UPT8 Q9UPT8 157 179 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 3 0.0065299 44.238 By matching By matching By MS/MS 1 1 1 1754400 635210 507990 611240 771 1940 818 2572;2573;2574 1832 1832 2741 1 EYVQLISVYEK EKELSKVREYVQLISV QLISVYEKKLLNLTVR R E Y E K K 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 1 0 0 2 2 0 0 11 0 1369.7129 Q6UX06 Q6UX06 122 132 OLFM4 Olfactomedin-4 yes yes 2 3.5827E-06 131.82 By MS/MS By MS/MS By MS/MS 1 1 1 37061000 17460000 9295800 10305000 772 1561 819 2575;2576;2577 1833;1834;1835 1834 3 EYVSNDAAQSDDEEKLQSQPTDTDGGR LHIMRRTKEYVSNDAA PTDTDGGRLKQKTTQL K E Y G R L 2 1 1 5 0 3 3 2 0 0 1 1 0 0 1 3 2 0 1 1 0 0 27 1 2954.265 Q5JSH3;H7BY83 Q5JSH3 394 420 WDR44 WD repeat-containing protein 44 yes no 3 0.011215 41.087 By matching By MS/MS By matching 1 1 1 49489000 15747000 23049000 10693000 773 1486 820 2578;2579;2580 1836 1836 1995;1996 1 FAAATGATPIAGR TGQRAVLKFAAATGAT GATPIAGRFTPGTFTN K F A G R F 5 1 0 0 0 0 0 2 0 1 0 0 0 1 1 0 2 0 0 0 0 0 13 0 1202.6408 F8WD59;C9J9K3;A0A0C4DG17;P08865 F8WD59 90 102 RPSA 40S ribosomal protein SA yes no 2 0.0023693 79.201 By matching By MS/MS 1 1 2026100 592930 1433200 0 774 186 821 2581;2582 1837;1838 1838 2 FAEAFEAIPR LEQYAIKKFAEAFEAI EAFEAIPRALAENSGV K F A P R A 3 1 0 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 10 0 1149.5819 P50990 P50990 441 450 CCT8 T-complex protein 1 subunit theta yes yes 2 0.0089577 78.334 By matching By MS/MS 1 1 462260 167690 294570 0 775 1272 822 2583;2584 1839 1839 1 FAELVYTGFWHSPECEFVR IKQGLGLKFAELVYTG SPECEFVRHCIAKSQE K F A V R H 1 1 0 0 1 0 3 1 1 0 1 0 0 3 1 1 1 1 1 2 0 0 19 0 2373.0888 P00966 P00966 317 335 ASS1 Argininosuccinate synthase yes yes 3 0.001246 59.434 By MS/MS By MS/MS 1 1 2149900 1443100 0 706750 776 1083 823 2585;2586 1840;1841 1840 2 FAESPHHVGQSGTK TKNLIRDRFAESPHHV HVGQSGTKVMSEPLSC R F A T K V 1 0 0 0 0 1 1 2 2 0 0 1 0 1 1 2 1 0 0 1 0 0 14 0 1480.7059 P48552 P48552 215 228 NRIP1 Nuclear receptor-interacting protein 1 yes yes 2 0.014166 45.014 By MS/MS 1 543680 0 543680 0 777 1250 824 2587 1842 1842 1636;1637;3324 0 FAFQEDDSFEKENR ISHALKQKFAFQEDDS DSFEKENRSWESSPFS K F A N R S 1 1 1 2 0 1 3 0 0 0 0 1 0 3 0 1 0 0 0 0 0 0 14 1 1760.7642 Q6P444;H0YEA6 Q6P444 321 334 MTFR2 Mitochondrial fission regulator 2 yes no 2 0.0059766 73.927 By MS/MS 1 0 0 0 0 778 1548 825 2588 1843 1843 2105 1 FAHTNVESLVNEYDDNGEGIILFR SNLRDNYRFAHTNVES GEGIILFRPSHLTNKF R F A F R P 1 1 3 2 0 0 3 2 1 2 2 0 0 2 0 1 1 0 1 2 0 0 24 0 2751.314 P30101 P30101 184 207 PDIA3 Protein disulfide-isomerase A3 yes yes 3 3.591E-34 108.99 By MS/MS By MS/MS By MS/MS 1 1 1 20104000 10823000 4186400 5095000 779 1208 826 2589;2590;2591 1844;1845;1846;1847;1848 1845 5 FAIQDISVEETSAK MIWTIILRFAIQDISV SVEETSAKEGLLLWCQ R F A A K E 2 0 0 1 0 1 2 0 0 2 0 1 0 1 0 2 1 0 0 1 0 0 14 0 1536.7672 P12814;H9KV75;P35609;O43707;G3V5M4;G3V2N5;A0A087WSZ2;Q08043;G3V2E8;G3V2X9;G3V2W4 P12814 134 147 ACTN1;ACTN2;ACTN4;ACTN3 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4;Alpha-actinin-3 yes no 2 4.0131E-05 91.937 By matching By MS/MS By MS/MS 1 1 1 1560400 702160 403380 454910 780 1152 827 2592;2593;2594 1849;1850 1850 2 FASDDEHDEHDENGATGPVK QFQGKKTKFASDDEHD NGATGPVKRAREETDK K F A V K R 2 0 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 20 0 2168.8883 P05455 P05455 364 383 SSB Lupus La protein yes yes 3 0.0025296 51.044 By MS/MS By matching By matching 1 1 1 36479000 12325000 13632000 10523000 781 1109 828 2595;2596;2597 1851 1851 63 1455 1 FASDDEHDEHDENGATGPVKR QFQGKKTKFASDDEHD GATGPVKRAREETDKE K F A K R A 2 1 1 4 0 0 3 2 2 0 0 1 0 1 1 1 1 0 0 1 0 0 21 1 2324.9894 P05455 P05455 364 384 SSB Lupus La protein yes yes 3;4 3.1139E-70 149.86 By MS/MS By MS/MS By MS/MS 9 9 9 1345900000 484100000 478680000 383140000 782 1109 829;830 2598;2599;2600;2601;2602;2603;2604;2605;2606;2607;2608;2609;2610;2611;2612;2613;2614;2615;2616;2617;2618;2619;2620;2621;2622;2623;2624 1852;1853;1854;1855;1856;1857;1858;1859;1860;1861;1862;1863;1864;1865;1866;1867 1853 63 1455 16 FASENDLPEWK ________________ ENDLPEWKERGTGDVK R F A W K E 1 0 1 1 0 0 2 0 0 0 1 1 0 1 1 1 0 1 0 0 0 0 11 0 1334.6143 C9JIC6;C9JXG8;C9JJ34;C9JDM3;C9JGV6;F6WQW2;P43487 C9JIC6 8 18 RANBP1 Ran-specific GTPase-activating protein yes no 2 0.0041174 81.95 By MS/MS 1 505980 0 505980 0 783 430 831 2625 1868 1868 1 FAVPTYAAK ________________ AVPTYAAKQPQQFPSR R F A A K Q 3 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 1 1 0 0 9 0 966.51747 A0A0J9YY58;Q13443 A0A0J9YY58 7 15 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes no 2 0.0037012 111.01 By matching By MS/MS By MS/MS 1 1 1 5735500 1756900 2109800 1868900 784 243 832 2626;2627;2628 1869;1870 1869 2951;3606 2 FEDENFILK GKSIYGEKFEDENFIL EDENFILKHTGPGILS K F E L K H 0 0 1 1 0 0 2 0 0 1 1 1 0 2 0 0 0 0 0 0 0 0 9 0 1153.5655 P62937;F8WE65;C9J5S7 P62937 83 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 2 0.0010445 111.17 By MS/MS By MS/MS By matching 1 1 1 1657700 0 1235500 422240 785 1315 833 2629;2630;2631 1871;1872 1871 2 FEDVVNQSSPK ENNTKQLRFEDVVNQS VVNQSSPKNCTVYCGG R F E P K N 0 0 1 1 0 1 1 0 0 0 0 1 0 1 1 2 0 0 0 2 0 0 11 0 1248.5986 Q01085 Q01085 193 203 TIAL1 Nucleolysin TIAR yes yes 2 0.016037 43.083 By MS/MS 1 0 0 0 0 786 1328 834 2632 1873 1873 1734;1735 1 FEEESKEPVADEEEEDSDDDVEPITEFR LYVMVNAKFEEESKEP VEPITEFRFVPSDKSA K F E F R F 1 1 0 5 0 0 10 0 0 1 0 1 0 2 2 2 1 0 0 2 0 0 28 1 3313.3794 P54105;E9PJF4 P54105 86 113 CLNS1A Methylosome subunit pICln yes no 3 4.2108E-95 142.45 By MS/MS By matching 1 1 366860000 243260000 123610000 0 787 1294 835 2633;2634 1874 1874 1706 1 FEELNADLFR YTSITRARFEELNADL ELNADLFRGTLDPVEK R F E F R G 1 1 1 1 0 0 2 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 10 0 1252.6088 E9PKE3;P11142;E9PN89;A8K7Q2;E9PNE6;P54652 E9PKE3 283 292 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 0.0077003 71.379 By MS/MS By matching By MS/MS 1 1 1 1064200 432590 480000 151600 788 598 836 2635;2636;2637 1875;1876 1875 2 FEPESPGFESR EFEPQSPRFEPESPGF ESPGFESRSPGLVPPS R F E S R S 0 1 0 0 0 0 3 1 0 0 0 0 0 2 2 2 0 0 0 0 0 0 11 0 1280.5673 H3BS42;Q9H5H4 H3BS42 48 58 ZNF768 Zinc finger protein 768 yes no 2 0.00079633 91.202 By MS/MS By MS/MS By MS/MS 1 1 1 11673000 3244000 4696000 3732500 789 843 837 2638;2639;2640 1877;1878;1879;1880 1879 1133 4 FESPATGILSPR MYGPPALRFESPATGI ATGILSPRGDDYFNYN R F E P R G 1 1 0 0 0 0 1 1 0 1 1 0 0 1 2 2 1 0 0 0 0 0 12 0 1273.6667 P49792 P49792 946 957 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.001899 77.776 By MS/MS By MS/MS By matching 1 1 1 1794700 777710 593030 423950 790 1261 838 2641;2642;2643 1881;1882;1883 1881 1666 3 FFNLKLKNQTSER TAIPFRSRFFNLKLKN LKNQTSERSRVRSSNQ R F F E R S 0 1 2 0 0 1 1 0 0 0 2 2 0 2 0 1 1 0 0 0 0 0 13 2 1623.8733 Q5T851;Q5T852;Q9NVV4 Q5T851 110 122 MTPAP Poly(A) RNA polymerase, mitochondrial yes no 2 0.01531 46.158 By MS/MS 1 0 0 0 0 791 1509 839 2644 1884 1884 2040;3418 1 FFTTPSK TPKKPEAKFFTTPSKS KFFTTPSKSVRKASHT K F F S K S 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 1 2 0 0 0 0 0 7 0 826.4225 O76021 O76021 462 468 RSL1D1 Ribosomal L1 domain-containing protein 1 yes yes 2 0.001094 138.06 By matching By matching By MS/MS 1 1 1 3165500 1060900 1133400 971140 792 1045 840 2645;2646;2647 1885 1885 3260 1 FGESEEVEMEVESDEEDDKQEK LIQERYEKFGESEEVE EEDDKQEKAEEPPSQL K F G E K A 0 0 0 3 0 1 9 1 0 0 0 2 1 1 0 2 0 0 0 2 0 0 22 1 2616.0545 H7C1L2;Q15459 H7C1L2 13 34 SF3A1 Splicing factor 3A subunit 1 yes no 4 0.0023213 45.844 By MS/MS 1 436740 0 0 436740 793 865 841 2648 1886 1886 64 1163 1 FGEVVDCTLK DLKDYFSKFGEVVDCT EVVDCTLKLDPITGRS K F G L K L 0 0 0 1 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1166.5642 D6RAF8;Q14103;D6RD83;D6RF44;H0YA96;H0Y8G5;D6RBQ9 D6RAF8 120 129 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.006958 74.376 By MS/MS By MS/MS By matching 2 2 1 3469400 717530 2333800 418040 794 484 842 2649;2650;2651;2652;2653 1887;1888;1889 1888 3 FGEYNSNMSPEEK SNVFRDKRFGEYNSNM SNMSPEEKMMKRFALE R F G E K M 0 0 2 0 0 0 3 1 0 0 0 1 1 1 1 2 0 0 1 0 0 0 13 0 1530.6297 E9PFK5;P78316 E9PFK5 88 100 NOP14 Nucleolar protein 14 yes no 2 0.0046976 68.044 By MS/MS By matching By matching 2 2 2 17188000 5317400 6161600 5708600 795 575 843;844 2654;2655;2656;2657;2658;2659 1890;1891 1890 758 1 FGNDVQHFK GDFSLSVKFGNDVQHF GNDVQHFKVLRDGAGK K F G F K V 0 0 1 1 0 1 0 1 1 0 0 1 0 2 0 0 0 0 0 1 0 0 9 0 1090.5196 P62993;J3KT38 P62993 101 109 GRB2 Growth factor receptor-bound protein 2 yes no 2;3 3.1305E-17 148.99 By MS/MS By matching By matching 2 2 2 13593000 11993000 1226300 373650 796 1316 845 2660;2661;2662;2663;2664;2665 1892;1893 1892 2 FHPEPYGLEDDQR GSSVDLHRFHPEPYGL YGLEDDQRSMGYDDLD R F H Q R S 0 1 0 2 0 1 2 1 1 0 1 0 0 1 2 0 0 0 1 0 0 0 13 0 1601.711 C9JZR2;O60716;E9PRE2 C9JZR2 275 287 CTNND1 Catenin delta-1 yes no 2;3 0.001919 72.643 By MS/MS By MS/MS By MS/MS 2 2 2 7507000 2675000 2817800 2014200 797 459 846 2666;2667;2668;2669;2670;2671 1894;1895;1896 1895 3655 3 FHRFLDVNSHK NFAWSNFRFHRFLDVN FLDVNSHKIEKTIEGI R F H H K I 0 1 1 1 0 0 0 0 2 0 1 1 0 2 0 1 0 0 0 1 0 0 11 1 1398.7157 A0A0G2JR45;A0A0G2JRG1;A0A0G2JQX1;A0A0G2JPW5;A0A0G2JSA7;A0A087X1Z1;Q96RT8 A0A0G2JR45 50 60 TUBGCP5 Gamma-tubulin complex component 5 yes no 2 0.0069097 66.692 By MS/MS 1 0 0 0 0 798 110 847 2672 1897 1897 11 1 FHSPSTTWSPNKDTPQEK KPRTRRSRFHSPSTTW NKDTPQEKKRPQSPSP R F H E K K 0 0 1 1 0 1 1 0 1 0 0 2 0 1 3 3 3 1 0 0 0 0 18 1 2085.9756 A0A0A0MTP7;F8VXG7;Q99590 A0A0A0MTP7 734 751 SCAF11 Protein SCAF11 yes no 3 0.0018052 71.527 By MS/MS By matching By matching 1 1 1 7808400 2788900 2780900 2238600 799 169 848 2673;2674;2675 1898;1899 1899 230;231 2 FIEDLNMYEASK DLGLEASKFIEDLNMY LNMYEASKDGLFRVDK K F I S K D 1 0 1 1 0 0 2 0 0 1 1 1 1 1 0 1 0 0 1 0 0 0 12 0 1458.6701 C9JRJ5;Q9UGP4 C9JRJ5 14 25 LIMD1 LIM domain-containing protein 1 yes no 2 0.016026 42.395 By matching By matching By MS/MS 1 1 1 1333800 415470 491560 426770 800 445 849 2676;2677;2678 1900 1900 3650 0 FIFNTVGGFDEISPAGIQVSFVQYSDEVK DNFNKVVKFIFNTVGG VQYSDEVKSEFKLNTY K F I V K S 1 0 1 2 0 2 2 3 0 3 0 1 0 4 1 3 1 0 1 4 0 0 29 0 3192.5655 D6RGG3;Q99715;A0A087X0A8 D6RGG3 2345 2373 COL12A1 Collagen alpha-1(XII) chain yes no 3 2.1351E-08 69.952 By matching By MS/MS By matching 1 1 1 38293000 14919000 10759000 12615000 801 497 850 2679;2680;2681 1901 1901 1 FIHQQPQSSSPVYGSSAK QWQPSSSRFIHQQPQS PVYGSSAKTSSVSNPQ R F I A K T 1 0 0 0 0 3 0 1 1 1 0 1 0 1 2 5 0 0 1 1 0 0 18 0 1946.9486 F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023 F5H836 77 94 PXN Paxillin yes no 2;3 3.2072E-23 111.11 By MS/MS By MS/MS By MS/MS 3 3 3 21907000 8093600 7045800 6767400 802 271 851;852 2682;2683;2684;2685;2686;2687;2688;2689;2690 1902;1903;1904;1905;1906;1907;1908;1909 1904 356;357;358;359;3609 7 FINDYGTHYITSGSMGGIYEYILVIDK YNYGMYAKFINDYGTH EYILVIDKAKMESLGI K F I D K A 0 0 1 2 0 0 1 4 1 5 1 1 1 1 0 2 2 0 4 1 0 0 27 0 3068.4841 P07357 P07357 333 359 C8A Complement component C8 alpha chain yes yes 3 3.0671E-22 92.412 By MS/MS By MS/MS By MS/MS 1 1 1 29196000 9151800 9223500 10821000 803 1117 853 2691;2692;2693 1910;1911;1912 1912 88 3 FIQELSGSSPK QQNTQLKRFIQELSGS ELSGSSPKRRRAEDKD R F I P K R 0 0 0 0 0 1 1 1 0 1 1 1 0 1 1 3 0 0 0 0 0 0 11 0 1191.6136 I3L254;Q01664 I3L254 56 66 TFAP4 Transcription factor AP-4 yes no 2 0.0022655 80.231 By MS/MS By MS/MS By matching 1 1 1 16427000 5891900 5244800 5290100 804 887 854 2694;2695;2696 1913;1914 1913 1192;1193 2 FIQELSGSSPKR QQNTQLKRFIQELSGS LSGSSPKRRRAEDKDE R F I K R R 0 1 0 0 0 1 1 1 0 1 1 1 0 1 1 3 0 0 0 0 0 0 12 1 1347.7147 I3L254;Q01664 I3L254 56 67 TFAP4 Transcription factor AP-4 yes no 2;3 0.00056701 91.093 By MS/MS By MS/MS By MS/MS 2 2 2 4633200 1479500 1993800 1159900 805 887 855 2697;2698;2699;2700;2701;2702 1915;1916;1917;1918 1916 1192;1193 4 FITVGYVDDTLFVR RPGRGEPRFITVGYVD VDDTLFVRFDSDATSP R F I V R F 0 1 0 2 0 0 0 1 0 1 1 0 0 2 0 0 2 0 1 3 0 0 14 0 1643.8559 P30488;P30487;A0A140TA14;A0A140TA11;A0A140T9Y5;A0A140T997;Q04826;P30485;P30483;P30481;P30479;P03989 P30488 46 59 HLA-B HLA class I histocompatibility antigen, B-50 alpha chain;HLA class I histocompatibility antigen, B-49 alpha chain;HLA class I histocompatibility antigen, B-40 alpha chain;HLA class I histocompatibility antigen, B-47 alpha chain;HLA class I histocompatibility antigen, B-45 alpha chain;HLA class I histocompatibility antigen, B-44 alpha chain;HLA class I histocompatibility antigen, B-41 alpha chain;HLA class I histocompatibility antigen, B-27 alpha chain yes no 2 0.002116 68.069 By MS/MS By matching By MS/MS 1 1 1 4554700 2989700 571680 993350 806 1209 856 2703;2704;2705 1919;1920 1919 1 FIWYNNVINPTLPR VGDLQMVKFIWYNNVI VINPTLPRVGASKIIV K F I P R V 0 1 3 0 0 0 0 0 0 2 1 0 0 1 2 0 1 1 1 1 0 0 14 0 1745.9253 P16233 P16233 417 430 PNLIP Pancreatic triacylglycerol lipase yes yes 2 0.0022537 74.76 By MS/MS By MS/MS By matching 1 1 1 2637600 1260800 651650 725150 807 1162 857 2706;2707;2708 1921;1922 1921 2 FIYEAWQGVER PAHEENVRFIYEAWQG EAWQGVERDLRGQVPG R F I E R D 1 1 0 0 0 1 2 1 0 1 0 0 0 1 0 0 0 1 1 1 0 0 11 0 1396.6776 I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L2L5 34 44 FAM195B Protein FAM195B yes no 2 0.00084443 92.239 By MS/MS By matching By MS/MS 1 1 1 1474000 570500 495140 408390 808 441 858 2709;2710;2711 1923;1924 1924 3648 2 FKDLGEENFK HKSEVAHRFKDLGEEN DLGEENFKALVLIAFA R F K F K A 0 0 1 1 0 0 2 1 0 0 1 2 0 2 0 0 0 0 0 0 0 0 10 1 1225.5979 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;C9JKR2;A0A087WWT3;H7C013 A0A0C4DGB6 35 44 ALB Serum albumin yes no 3 0.0010283 89.679 By MS/MS By matching By matching 1 1 1 786420 437630 171240 177550 + 809 194 859 2712;2713;2714 1925 1925 1 FLASVSTVLTSK AVHASLDKFLASVSTV VSTVLTSKYR______ K F L S K Y 1 0 0 0 0 0 0 0 0 0 2 1 0 1 0 3 2 0 0 2 0 0 12 0 1251.7075 G3V1N2;P69905 G3V1N2 97 108 HBA2;HBA1 Hemoglobin subunit alpha yes no 2 0.0026353 81.338 By MS/MS By matching 1 1 1887700 1259400 628350 0 810 709 860 2715;2716 1926;1927 1926 2 FLEESVSMSPEER ESGSTLKKFLEESVSM VSMSPEERARYLENYD K F L E R A 0 1 0 0 0 0 4 0 0 0 1 0 1 1 1 3 0 0 0 1 0 0 13 0 1538.6923 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 86 98 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes no 2 0.0058427 64.394 By matching By MS/MS 1 1 767040 0 409960 357080 811 21 861 2717;2718 1928 1928 23 1 FLEQQNQVLQTK ASFIDKVRFLEQQNQV QNQVLQTKWELLQQVD R F L T K W 0 0 1 0 0 4 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 0 12 0 1474.778 CON__P04264;P04264;CON__Q9R0H5;CON__Q6NXH9;CON__Q6IFZ6;CON__Q7Z794;CON__ENSEMBL:ENSBTAP00000038253;CON__P35908;Q7Z794;P35908 CON__P04264 200 211 KRT1;KRT77;KRT2 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 2 epidermal yes no 2 1.1288E-07 111.46 By matching By MS/MS 1 1 1069000 489160 579850 0 + 812 469 862 2719;2720 1929 1929 1 FLIPNASQAESK DVLSLLEKFLIPNASQ NASQAESKVFYLKMKG K F L S K V 2 0 1 0 0 1 1 0 0 1 1 1 0 1 1 2 0 0 0 0 0 0 12 0 1303.6772 E7EX29;P63104;E7ESK7;B0AZS6 E7EX29 104 115 YWHAZ 14-3-3 protein zeta/delta yes no 2 0.012662 61.65 By matching By MS/MS 1 1 1608600 514740 1093800 0 813 557 863 2721;2722 1930 1930 1 FLLADNLYCK STNSMETRFLLADNLY LADNLYCKASVPPTDK R F L C K A 1 0 1 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 1 0 0 0 10 0 1255.6271 B4DWR3;P61758 B4DWR3 100 109 VBP1 Prefoldin subunit 3 yes no 2 0.0019364 90.37 By MS/MS By matching 1 1 1016800 541680 0 475150 814 352 864 2723;2724 1931 1931 3632 1 FLLYTNENPNNFQEVAADSSSISGSNFK SPKDVNTRFLLYTNEN SISGSNFKTNRKTRFI R F L F K T 2 0 5 1 0 1 2 1 0 1 2 1 0 3 1 5 1 0 1 1 0 0 28 0 3092.4363 P16233 P16233 55 82 PNLIP Pancreatic triacylglycerol lipase yes yes 3 0.017662 36.577 By MS/MS By matching By matching 1 1 1 8198400 2940300 3116600 2141500 815 1162 865 2725;2726;2727 1932 1932 1 FLSHSTDSLNK ENMSNTWKFLSHSTDS HSTDSLNKISKVNEST K F L N K I 0 0 1 1 0 0 0 0 1 0 2 1 0 1 0 3 1 0 0 0 0 0 11 0 1247.6146 Q12802;A0A087WY36;A0A087WTD7;A8MYJ1 Q12802 1925 1935 AKAP13 A-kinase anchor protein 13 yes no 2 0.0016884 98.582 By MS/MS By MS/MS By matching 1 1 1 5571100 1972900 1916400 1681800 816 1364 866 2728;2729;2730 1933;1934 1933 1798;1799;3356 2 FNALQYLR IPDEYFKRFNALQYLR FNALQYLRLSHNELAD R F N L R L 1 1 1 0 0 1 0 0 0 0 2 0 0 1 0 0 0 0 1 0 0 0 8 0 1023.5502 P51884 P51884 228 235 LUM Lumican yes yes 2 0.014656 105.39 By MS/MS By matching By matching 1 1 1 3063400 2163200 121080 779040 817 1280 867 2731;2732;2733 1935 1935 1 FNDSEGDDTEETEDYR DKESGKQKFNDSEGDD TEETEDYRQFRKSVLA K F N Y R Q 0 1 1 4 0 0 4 1 0 0 0 0 0 1 0 1 2 0 1 0 0 0 16 0 1920.7133 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 394 409 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.00075754 82.449 By MS/MS By MS/MS By MS/MS 1 1 1 0 0 0 0 818 596 868 2734;2735;2736 1936;1937;1938 1938 795;3098 3 FNEENYGVK WDPNEMFKFNEENYGV NEENYGVKTTYDSSLS K F N V K T 0 0 2 0 0 0 2 1 0 0 0 1 0 1 0 0 0 0 1 1 0 0 9 0 1098.4982 H3BUF6;Q8WWM7;H3BSK9 H3BUF6 259 267 ATXN2L Ataxin-2-like protein yes no 2 0.0024594 107.01 By MS/MS By MS/MS By matching 2 1 1 2530400 1140500 641210 748670 819 850 869 2737;2738;2739;2740 1939;1940 1940 3721 2 FNISSHNQSPK HSFSGVQRFNISSHNQ SSHNQSPKRHSISHSP R F N P K R 0 0 2 0 0 1 0 0 1 1 0 1 0 1 1 3 0 0 0 0 0 0 11 0 1257.6102 Q9H1A4 Q9H1A4 369 379 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 2 0.006529 66.023 By MS/MS By matching 1 1 1715700 1098600 0 617100 820 1811 870 2741;2742 1941 1941 2528 1 FNSLNELVDYHR KYFLWVVKFNSLNELV NELVDYHRSTSVSRNQ K F N H R S 0 1 2 1 0 0 1 0 1 0 2 0 0 1 0 1 0 0 1 1 0 0 12 0 1505.7263 P62993 P62993 125 136 GRB2 Growth factor receptor-bound protein 2 yes yes 2;3 6.6147E-21 146.5 By MS/MS By matching By matching 2 1 1 10630000 9039500 503230 1087700 821 1316 871 2743;2744;2745;2746 1942;1943 1943 2 FNSTEYQVVTR TSVIRVNRFNSTEYQV TEYQVVTRVDKGGALH R F N T R V 0 1 1 0 0 1 1 0 0 0 0 0 0 1 0 1 2 0 1 2 0 0 11 0 1342.6517 Q07954 Q07954 445 455 LRP1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes yes 3 0.013206 48.112 By MS/MS 1 0 0 0 0 822 1353 872 2747 1944 1944 1776;3353;3354;3827 1 FPLRNAEMAKVSEISSVPASDR LDNCTMFRFPLRNAEM SSVPASDRMVQNLLDK R F P D R M 3 2 1 1 0 0 2 0 0 1 1 1 1 1 2 4 0 0 0 2 0 0 22 2 2403.2216 Q9NZJ4 Q9NZJ4 2700 2721 SACS Sacsin yes yes 3 0.009496 46.399 By matching By MS/MS 1 1 6760900 3281000 3479900 0 823 1884 873 2748;2749 1945 1945 2657;2658;2659 0 FPTASTYLHQLTLQKMVTQFK LLETSEIKFPTASTYL QKMVTQFKEKNESLQY K F P F K E 1 0 0 0 0 3 0 0 1 0 3 2 1 2 1 1 4 0 1 1 0 0 21 1 2481.309 C9JI46;Q8N3X6 C9JI46 291 311 LCORL Ligand-dependent nuclear receptor corepressor-like protein yes no 3 0.0065424 43.383 By matching By MS/MS By matching 1 1 1 12826000 5297800 3572900 3954800 824 436 874 2750;2751;2752 1946 1946 573;3023;3647 1 FQDVGPQAPVGSVYQK SFHKESGRFQDVGPQA PVGSVYQKTNAVSEIK R F Q Q K T 1 0 0 1 0 3 0 2 0 0 0 1 0 1 2 1 0 0 1 3 0 0 16 0 1718.8628 H0Y5J4;B4DDD6;Q9UJU6 H0Y5J4 78 93 DBNL Drebrin-like protein yes no 2 4.488E-08 98.902 By matching By MS/MS By matching 1 1 1 12304000 4619900 4583800 3100400 825 338 875 2753;2754;2755 1947 1947 3627 1 FQEQECPPSPEPTR ELVRVIRKFQEQECPP PPSPEPTRKEKDKKGC K F Q T R K 0 1 0 0 1 2 3 0 0 0 0 0 0 1 4 1 1 0 0 0 0 0 14 0 1700.7464 P62070 P62070 178 191 RRAS2 Ras-related protein R-Ras2 yes yes 2 1.4448E-05 91.355 By MS/MS By matching By MS/MS 1 1 1 6426200 2495200 1983800 1947300 826 1308 876 2756;2757;2758 1948;1949 1948 1720 2 FQEQECPPSPEPTRK ELVRVIRKFQEQECPP PSPEPTRKEKDKKGCH K F Q R K E 0 1 0 0 1 2 3 0 0 0 0 1 0 1 4 1 1 0 0 0 0 0 15 1 1828.8414 P62070 P62070 178 192 RRAS2 Ras-related protein R-Ras2 yes yes 3 0.0039399 64.2 By matching By matching By MS/MS 1 1 1 6632800 2300900 2357800 1974100 827 1308 877 2759;2760;2761 1950 1950 1720 1 FQSEEQQQTEDELQDK RINKKIEKFQSEEQQQ TEDELQDKIHPFAQTQ K F Q D K I 0 0 0 2 0 5 4 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 16 0 1980.8549 CON__P02666 CON__P02666 33 48 yes yes 2;3 1.2306E-71 163.91 By MS/MS By MS/MS By MS/MS 2 2 2 32823000 10100000 12653000 10071000 + 828 467 878 2762;2763;2764;2765;2766;2767 1951;1952;1953;1954 1952 614 4 FSASGELGNGNIK SCAKDGVKFSASGELG ELGNGNIKLSQTSNVD K F S I K L 1 0 2 0 0 0 1 3 0 1 1 1 0 1 0 2 0 0 0 0 0 0 13 0 1292.6361 P12004 P12004 169 181 PCNA Proliferating cell nuclear antigen yes yes 2 0.0087201 69.979 By matching By MS/MS 1 1 530610 122080 408530 0 829 1149 879 2768;2769 1955 1955 68 1 FSGDLDDQTCR EKIGCLLKFSGDLDDQ DLDDQTCREDLHILFS K F S C R E 0 1 0 3 1 1 0 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 11 0 1312.5354 P05455 P05455 236 246 SSB Lupus La protein yes yes 2 0.0038107 78.556 By matching By MS/MS 1 1 776600 236720 539890 0 830 1109 880 2770;2771 1956 1956 1 FSGGFGAR SRGRSKSRFSGGFGAR FSGGFGARDYRQSSGA R F S A R D 1 1 0 0 0 0 0 3 0 0 0 0 0 2 0 1 0 0 0 0 0 0 8 0 797.38204 A0A0J9YVQ7;A0A087WVZ1;A0A0D9SFB3;A0A0D9SG12;A0A0D9SF53;O15523;O00571 A0A0J9YVQ7 110 117 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3Y;ATP-dependent RNA helicase DDX3X yes no 2 0.013113 83.647 By MS/MS By matching By MS/MS 1 1 1 11565000 4144800 4494800 2925700 831 234 881 2772;2773;2774 1957;1958 1957 316 2 FSGSGSGTDFTLK RASGVPDRFSGSGSGT SGTDFTLKISRVEAED R F S L K I 0 0 0 1 0 0 0 3 0 0 1 1 0 2 0 3 2 0 0 0 0 0 13 0 1302.6092 A0A087X0Q4;A2NJV5;A0A0A0MRZ7;A0A075B6S6;A0A075B6S2;A0A075B6P5;A0A087WW87;P06310;P01615;P01614 A0A087X0Q4 69 81 IGKV2-40;IGKV A18;IGKV2D-26;IGKV2D-30;IGKV2D-29;IGKV2D-28 Ig kappa chain V-II region RPMI 6410;Ig kappa chain V-II region FR;Ig kappa chain V-II region Cum yes no 2 3.3479E-13 129.82 By MS/MS By MS/MS By MS/MS 1 1 1 69216000 57162000 6707900 5345700 832 7 882 2775;2776;2777 1959;1960;1961;1962;1963 1960 5 FSILTVNNDITLLK AKVFKNPKFSILTVNN NNDITLLKLATPARFS K F S L K L 0 0 2 1 0 0 0 0 0 2 3 1 0 1 0 1 2 0 0 1 0 0 14 0 1589.9029 H3BTQ4;H3BP92;H3BMY1;J3QKZ2;Q6GPI1;P17538 H3BTQ4 60 73 CTRB2;CTRB1 Chymotrypsinogen B2;Chymotrypsin B2 chain A;Chymotrypsin B2 chain B;Chymotrypsin B2 chain C;Chymotrypsinogen B;Chymotrypsin B chain A;Chymotrypsin B chain B;Chymotrypsin B chain C yes no 2 9.0488E-08 106.01 By MS/MS By MS/MS By MS/MS 1 1 1 4769600 1693300 1706900 1369500 833 817 883 2778;2779;2780 1964;1965;1966 1964 3 FSKEEPVSSGPEEAVGK SGSKKKRKFSKEEPVS GPEEAVGKSSSKKKKK K F S G K S 1 0 0 0 0 0 4 2 0 0 0 2 0 1 2 3 0 0 0 2 0 0 17 1 1775.8578 O00567 O00567 562 578 NOP56 Nucleolar protein 56 yes yes 2;3 1.3038E-10 95.197 By MS/MS By MS/MS By MS/MS 2 2 2 18940000 6149300 6718300 6072200 834 978 884 2781;2782;2783;2784;2785;2786 1967;1968;1969;1970 1969 1295;1296 4 FSLSPSLGPQASR SPCPPQRRFSLSPSLG SLGPQASRFLPSARSS R F S S R F 1 1 0 0 0 1 0 1 0 0 2 0 0 1 2 4 0 0 0 0 0 0 13 0 1345.699 Q9NYF3 Q9NYF3 231 243 FAM53C Protein FAM53C yes yes 2 0.0029246 78.529 By MS/MS By MS/MS By matching 1 1 1 1535000 822850 0 712140 835 1878 885 2787;2788;2789 1971;1972 1972 2648;2649 2 FSPDSQYIDNR KNNYYSSRFSPDSQYI DSQYIDNRSVNSAGLH R F S N R S 0 1 1 2 0 1 0 0 0 1 0 0 0 1 1 2 0 0 1 0 0 0 11 0 1340.5997 Q5VWV2;Q8TEW0;F5GZI3;Q5VWU8 Q5VWV2 338 348 PARD3 Partitioning defective 3 homolog yes no 2 0.0021496 99.53 By MS/MS By MS/MS By MS/MS 1 1 1 8926900 3192700 3059600 2674500 836 1522 886 2790;2791;2792 1973;1974;1975 1973 2066;3863 3 FSPPSPPGK TPTVAKHKFSPPSPPG SPPSPPGKPVVTDITE K F S G K P 0 0 0 0 0 0 0 1 0 0 0 1 0 1 4 2 0 0 0 0 0 0 9 0 912.47052 A0A0A0MTS7;Q8WZ42;A0A0A0MRA3 A0A0A0MTS7 20269 20277 TTN Titin yes no 2 0.0068823 79.489 By MS/MS By MS/MS By matching 1 1 1 4102300 1456600 1253400 1392400 837 171 887 2793;2794;2795 1976;1977 1977 232 2 FSSLHFMVEVK DCEKLRRRFSSLHFMV LHFMVEVKGDLTAKKM R F S V K G 0 0 0 0 0 0 1 0 1 0 1 1 1 2 0 2 0 0 0 2 0 0 11 0 1322.6693 H0Y6Y2;Q5JRU8;Q5JRU2;F8VVS7;P55211 H0Y6Y2 36 46 CASP9 Caspase;Caspase-9;Caspase-9 subunit p35;Caspase-9 subunit p10 yes no 2 0.015599 51.727 By matching By matching By MS/MS 1 1 1 2507400 894410 892910 720080 838 675 888 2796;2797;2798 1978 1978 901;902 0 FSSVSSPQPR ASVRSLGRFSSVSSPQ SVSSPQPRSRHPSSSS R F S P R S 0 1 0 0 0 1 0 0 0 0 0 0 0 1 2 4 0 0 0 1 0 0 10 0 1090.5407 Q9P206 Q9P206 337 346 KIAA1522 Uncharacterized protein KIAA1522 yes yes 2 0.0048032 69.346 By MS/MS By matching By matching 1 1 1 2255500 823900 738910 692650 839 1888 889 2799;2800;2801 1979 1979 2663 1 FSTLTDDPSPR KDDLGPDRFSTLTDDP LTDDPSPRLSAQAQVA R F S P R L 0 1 0 2 0 0 0 0 0 0 1 0 0 1 2 2 2 0 0 0 0 0 11 0 1234.583 Q14C86 Q14C86 1011 1021 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes yes 2 0.0031473 72.243 By matching By matching By MS/MS 1 1 1 1187000 364830 459580 362600 840 1424 890 2802;2803;2804 1980 1980 1905 1 FTDKDQQPSGSEGEDDDAEAALKK DDMYGPEKFTDKDQQP DAEAALKKEVGDIKAS K F T K K E 3 0 0 5 0 2 3 2 0 0 1 3 0 1 1 2 1 0 0 0 0 0 24 2 2580.1463 H3BNW0;Q9NXG2 H3BNW0 78 101 THUMPD1 THUMP domain-containing protein 1 yes no 3 1.2742E-05 76.807 By matching By MS/MS By MS/MS 1 1 1 29924000 7741200 13698000 8485200 841 827 891 2805;2806;2807 1981;1982 1982 1111;1112 2 FTEYSMTSSVMR WSEETKSRFTEYSMTS SMTSSVMRRNEQLTLH R F T M R R 0 1 0 0 0 0 1 0 0 0 0 0 2 1 0 3 2 0 1 1 0 0 12 0 1437.6268 A0A075B6Q4;Q96GA3 A0A075B6Q4 64 75 LTV1 Protein LTV1 homolog yes no 2 0.0013222 99.815 By MS/MS By MS/MS By MS/MS 4 3 2 7911500 3365100 2877800 1668700 842 10 892;893;894 2808;2809;2810;2811;2812;2813;2814;2815;2816 1983;1984;1985;1986;1987;1988;1989;1990;1991 1983 1;2 7;2868;3571 8 FTGSQPFGQGVEHATANK NCLPCPPRFTGSQPFG VEHATANKQVCKPRNP R F T N K Q 2 0 1 0 0 2 1 3 1 0 0 1 0 2 1 1 2 0 0 1 0 0 18 0 1874.8911 P07996 P07996 624 641 THBS1 Thrombospondin-1 yes yes 3 0.0044107 46.873 By MS/MS 1 879600 879600 0 0 + 843 1124 895 2817 1992 1992 1 FTISTDNSK YADSVKGRFTISTDNS TISTDNSKNTLYLQMN R F T S K N 0 0 1 1 0 0 0 0 0 1 0 1 0 1 0 2 2 0 0 0 0 0 9 0 1011.4873 A0A075B7B8 A0A075B7B8 87 95 IGHV3OR16-12 yes yes 2 0.01865 40.154 By MS/MS 1 0 0 0 0 844 16 896 2818 1993 1993 15;16;2869 1 FTVGKESNIQTMGGK GGHTMTNKFTVGKESN NIQTMGGKTFKATVQM K F T G K T 0 0 1 0 0 1 1 3 0 1 0 2 1 1 0 1 2 0 0 1 0 0 15 1 1595.7977 P51161 P51161 64 78 FABP6 Gastrotropin yes yes 2 0.0080032 52.247 By MS/MS 1 0 0 0 0 845 1275 897 2819 1994 1994 125 1681;3334;3336 1 FVAFSGEGQSLR EEDEAGGRFVAFSGEG SGEGQSLRKKGRKP__ R F V L R K 1 1 0 0 0 1 1 2 0 0 1 0 0 2 0 2 0 0 0 1 0 0 12 0 1296.6463 Q92890 Q92890 290 301 UFD1L Ubiquitin fusion degradation protein 1 homolog yes yes 2 0.0017038 79.466 By matching By MS/MS By MS/MS 1 1 1 3167200 1121700 1054200 991240 846 1712 898 2820;2821;2822 1995;1996 1995 2350;2351 2 FVSEGDGGR CPSRGRKRFVSEGDGG VSEGDGGRLKPESY__ R F V G R L 0 1 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 1 0 0 9 0 922.41446 Q53EL6 Q53EL6 455 463 PDCD4 Programmed cell death protein 4 yes yes 2 0.0020359 102.95 By MS/MS By MS/MS By MS/MS 2 2 1 14550000 6970500 4154300 3424900 847 1476 899 2823;2824;2825;2826;2827 1997;1998;1999;2000;2001;2002;2003;2004;2005 2000 1979 9 FVSEIVDTVYEDGDSIQVGLVQYNSDPTDEFFLK DSFQEVLRFVSEIVDT PTDEFFLKDFSTKRQI R F V L K D 0 0 1 5 0 2 3 2 0 2 2 1 0 3 1 3 2 0 2 5 0 0 34 0 3867.8255 E7ENL6;P12111 E7ENL6 1054 1087 COL6A3 Collagen alpha-3(VI) chain yes no 3 4.0477E-45 97.469 By matching By MS/MS By MS/MS 1 1 1 263880000 75709000 90935000 97231000 848 522 900 2828;2829;2830 2006;2007 2006 31 2 FWEVISDEHGIDPTGTYHGDSDLQLDR ________________ DSDLQLDRISVYYNEA M F W D R I 0 1 0 5 0 1 2 3 2 2 2 0 0 1 1 2 2 1 1 1 0 0 27 0 3101.4003 Q5JP53;P07437 Q5JP53 2 28 TUBB Tubulin beta chain yes no 4 0.014505 31.819 By MS/MS By matching 1 1 950190 463940 0 486240 849 1118 901 2831;2832 2008 2008 1 FYAGGSER EEEEEGQRFYAGGSER FYAGGSERSGQQIVGP R F Y E R S 1 1 0 0 0 0 1 2 0 0 0 0 0 1 0 1 0 0 1 0 0 0 8 0 885.39808 F2Z2K0;Q9UNZ2 F2Z2K0 94 101 NSFL1C NSFL1 cofactor p47 yes no 2 0.012371 64.207 By MS/MS 1 0 0 0 0 850 622 902 2833 2009 2009 3682 1 FYDANYDGKEYDPVEAR DFIQWFKKFYDANYDG EYDPVEARQGQDAIPP K F Y A R Q 2 1 1 3 0 0 2 1 0 0 0 1 0 1 1 0 0 0 3 1 0 0 17 1 2050.8909 K7EL66;K7ERD8;Q15555 K7EL66 63 79 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes no 3 0.018124 43.297 By matching By MS/MS 1 1 708150 294330 413820 0 851 941 903 2834;2835 2010 2010 3731 1 GAAEEAELEDSDDEEKPVKQDDFPK FISAGLKKGAAEEAEL VKQDDFPKDFGPRKLK K G A P K D 3 0 0 5 0 1 6 1 0 0 1 3 0 1 2 1 0 0 0 1 0 0 25 2 2790.2356 F6XM96;Q9UBB9 F6XM96 88 112 TFIP11 Tuftelin-interacting protein 11 yes no 3 2.2006E-08 78.708 By MS/MS By MS/MS By matching 1 1 1 21778000 8296000 8131900 5350000 852 663 904 2836;2837;2838 2011;2012 2012 889 2 GADSGEEKEEGINR NTKNGGEKGADSGEEK EKEEGINREDKTDKGG K G A N R E 1 1 1 1 0 0 4 3 0 1 0 1 0 0 0 1 0 0 0 0 0 0 14 1 1489.6645 Q9BVG4 Q9BVG4 194 207 PBDC1 Protein PBDC1 yes yes 2 0.018331 51.726 By matching By MS/MS By matching 1 1 1 3090100 911670 1480400 698070 853 1785 905 2839;2840;2841 2013 2013 2477 1 GAEETSWSGEER CSQAAGTKGAEETSWS TSWSGEERAAKVPSTP K G A E R A 1 1 0 0 0 0 4 2 0 0 0 0 0 0 0 2 1 1 0 0 0 0 12 0 1336.5531 Q9H7N4 Q9H7N4 958 969 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 2 0.0070378 62.528 By MS/MS By MS/MS By matching 1 1 1 7287600 2526600 2525400 2235600 854 1831 906 2842;2843;2844 2014;2015 2014 2570 2 GALHTVSHEDIR LRLDRLHKGALHTVSH TVSHEDIRDIRNSTGS K G A I R D 1 1 0 1 0 0 1 1 2 1 1 0 0 0 0 1 1 0 0 1 0 0 12 0 1333.6739 Q13136;H0YD72;H0YDW2 Q13136 757 768 PPFIA1 Liprin-alpha-1 yes no 2;3 0.0013082 83.226 By MS/MS By MS/MS By matching 2 2 2 14525000 6635500 4642000 3247800 855 1378 907 2845;2846;2847;2848;2849;2850 2016;2017;2018 2018 1820 3 GAMAATYSALNR QDAPHLVKGAMAATYS ATYSALNRNQSPVLEP K G A N R N 4 1 1 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 1 0 0 0 12 0 1224.5921 P51812 P51812 701 712 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 2 0.00039699 93.096 By matching By MS/MS By matching 1 1 1 1656700 621190 583400 452110 856 1277 908 2851;2852;2853 2019 2019 3811 1 GAMIIYTSGTTGRPK PEQGWRNKGAMIIYTS SGTTGRPKGVLSTHQN K G A P K G 1 1 0 0 0 0 0 3 0 2 0 1 1 0 1 1 3 0 1 0 0 0 15 1 1551.8079 F5GX20;F5H2G6;Q4G176 F5GX20 196 210 ACSF3 Acyl-CoA synthetase family member 3, mitochondrial yes no 3 0.016372 43.594 By matching By matching By MS/MS 1 1 1 3470200 902920 780550 1786800 857 636 909 2854;2855;2856 2020 2020 855;3108;3686 0 GAPSSPATGVLPSPQGK SLSRYFRRGAPSSPAT VLPSPQGKSTSLSKAS R G A G K S 2 0 0 0 0 1 0 3 0 0 1 1 0 0 4 3 1 0 0 1 0 0 17 0 1549.81 Q5SRE5 Q5SRE5 1705 1721 NUP188 Nucleoporin NUP188 homolog yes yes 2 6.0123E-06 86.573 By MS/MS By MS/MS By matching 2 1 1 6094400 3615400 1458300 1020600 858 1496 910;911 2857;2858;2859;2860 2021;2022;2023;2024 2024 2013;2014;2015 4 GASSSPQRRQSPSPSTR SSPPPVRRGASSSPQR QSPSPSTRPIRRVSRT R G A T R P 1 3 0 0 0 2 0 1 0 0 0 0 0 0 3 6 1 0 0 0 0 0 17 2 1784.8878 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 712 728 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.0074574 49.595 By MS/MS 1 27738000 0 27738000 0 859 322 912 2861 2025 2025 431;432;433;2982 0 GASVIPTSR G A S R 1 1 0 0 0 0 0 1 0 1 0 0 0 0 1 2 1 0 0 1 0 0 9 0 886.48723 REV__H7C3N7 yes yes 2 0.0077373 78.513 By MS/MS By matching By matching 2 1 1 52612000 25217000 15017000 12377000 + 860 1999 913 2862;2863;2864;2865 2026 2026 2852 1 GATQQILDEAER EACTIVLRGATQQILD QILDEAERSLHDALCV R G A E R S 2 1 0 1 0 2 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 0 12 0 1329.6525 F8VQ14;F5GWF6;P78371 F8VQ14 377 388 CCT2 T-complex protein 1 subunit beta yes no 2 8.1746E-08 115.57 By matching By MS/MS By matching 1 1 1 1775200 500990 940670 333580 861 631 914 2866;2867;2868 2027 2027 1 GAVGLNLQSK DITFLWYKGAVGLNLQ VGLNLQSKTQRSLTAE K G A S K T 1 0 1 0 0 1 0 2 0 0 2 1 0 0 0 1 0 0 0 1 0 0 10 0 985.55564 Q96LA6 Q96LA6 150 159 FCRL1 Fc receptor-like protein 1 yes yes 2 0.0053557 79.201 By MS/MS By matching 1 1 85216000 40468000 44748000 0 862 1747 915 2869;2870 2028 2028 2412 1 GCWEVSPTER MANRRVGRGCWEVSPT WEVSPTERRPPAGLRG R G C E R R 0 1 0 0 1 0 2 1 0 0 0 0 0 0 1 1 1 1 0 1 0 0 10 0 1219.5292 A0A087WV76;Q8IZT6 A0A087WV76 9 18 ASPM Abnormal spindle-like microcephaly-associated protein yes no 2 0.00092839 94.82 By MS/MS By matching By matching 1 1 1 1036100 346460 359640 329990 863 47 916 2871;2872;2873 2029 2029 67 1 GDADMYDLPK VVDLNSTRGDADMYDL ADMYDLPKKEDALLYQ R G D P K K 1 0 0 3 0 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 0 0 10 0 1123.4856 Q5HY57;P50402 Q5HY57 34 43 EMD Emerin yes no 2 0.0031209 79.974 By matching By MS/MS By MS/MS 1 1 1 8224300 1810400 3382500 3031400 864 1268 917 2874;2875;2876 2030;2031 2031 3807 2 GDEASEEGQNGSSPK TRWLNSGRGDEASEEG GQNGSSPKSKTKWTKE R G D P K S 1 0 1 1 0 1 3 3 0 0 0 1 0 0 1 3 0 0 0 0 0 0 15 0 1490.6121 E7EV99;E7ENY0;P35611;H0Y9H2 E7EV99 453 467 ADD1 Alpha-adducin yes no 2 0.0017798 77.288 By MS/MS 1 0 0 0 0 865 523 918 2877 2032 2032 666;667 1 GDFCIQVGR DSKPGTIRGDFCIQVG DFCIQVGRNIIHGSDS R G D G R N 0 1 0 1 1 1 0 2 0 1 0 0 0 1 0 0 0 0 0 1 0 0 9 0 1050.4917 P15531;E7ERL0;J3KPD9;Q32Q12;O60361;P22392 P15531 106 114 NME1;NME2;NME1-NME2;NME2P1 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 2 0.0057948 87.181 By matching By MS/MS By matching 1 1 1 4374400 1280200 2049400 1044700 866 1160 919 2878;2879;2880 2033 2033 1 GDFIHVMDNSDPNWWK DGELGFRRGDFIHVMD NSDPNWWKGACHGQTG R G D W K G 0 0 2 3 0 0 0 1 1 1 0 1 1 1 1 1 0 2 0 1 0 0 16 0 1959.8574 P62993 P62993 180 195 GRB2 Growth factor receptor-bound protein 2 yes yes 3 0.0033049 49.066 By MS/MS By matching 1 1 819000 585010 233990 0 867 1316 920 2881;2882 2034 2034 1 GDLGIEIPAEK SDGIMVARGDLGIEIP GIEIPAEKVFLAQKMM R G D E K V 1 0 0 1 0 0 2 2 0 2 1 1 0 0 1 0 0 0 0 0 0 0 11 0 1140.6027 B4DNK4;P14618;H3BTN5;H3BR70;P30613 B4DNK4 221 231 PKM;PKLR Pyruvate kinase;Pyruvate kinase PKM;Pyruvate kinase PKLR yes no 2 0.0091122 68.847 By MS/MS By matching By matching 1 1 1 2341900 652070 1266300 423490 868 345 921 2883;2884;2885 2035 2035 1 GDQPAASGDSDDDEPPPLPR FLLYKIVRGDQPAASG DEPPPLPRLKRRDFTP R G D P R L 2 1 0 5 0 1 1 2 0 0 1 0 0 0 5 2 0 0 0 0 0 0 20 0 2034.8767 O00264 O00264 48 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 2;3 2.3592E-05 78.354 By matching By MS/MS By MS/MS 2 2 1 10117000 1724100 7549300 843750 869 972 922 2886;2887;2888;2889;2890 2036;2037;2038 2038 1284;1285 2 GDREEEVERPVSSPGDPEQK GDLELDERGDREEEVE SPGDPEQKKLDPLEGL R G D Q K K 0 2 0 2 0 1 5 2 0 0 0 1 0 0 3 2 0 0 0 2 0 0 20 2 2239.0353 O43149 O43149 2432 2451 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 3 0.017269 51.535 By MS/MS By matching By matching 1 1 1 4066500 1719100 1393200 954230 870 999 923 2891;2892;2893 2039 2039 1331 1 GDVTAEEAAGASPAK SQSSKAPRGDVTAEEA AAGASPAKANGQENGH R G D A K A 5 0 0 1 0 0 2 2 0 0 0 1 0 0 1 1 1 0 0 1 0 0 15 0 1372.647 P49006 P49006 11 25 MARCKSL1 MARCKS-related protein yes yes 2 5.0173E-183 195.5 By MS/MS By MS/MS By MS/MS 1 1 1 44908000 12428000 19387000 13093000 871 1254 924 2894;2895;2896 2040;2041;2042;2043 2043 1646 4 GDVTAEEAAGASPAKANGQENGHVK SQSSKAPRGDVTAEEA GQENGHVKSNGDLSPK R G D V K S 6 0 2 1 0 1 3 4 1 0 0 2 0 0 1 1 1 0 0 2 0 0 25 1 2407.1364 P49006 P49006 11 35 MARCKSL1 MARCKS-related protein yes yes 3;4 1.4303E-22 94.176 By MS/MS By MS/MS By MS/MS 6 7 5 68761000 34585000 22387000 11788000 872 1254 925;926;927 2897;2898;2899;2900;2901;2902;2903;2904;2905;2906;2907;2908;2909;2910;2911;2912;2913;2914 2044;2045;2046;2047;2048;2049;2050;2051;2052;2053;2054;2055;2056;2057;2058 2048 72;73;131 1646 15 GEAAAERPGEAAVASSPSK QFSKTAAKGEAAAERP AVASSPSKANGQENGH K G E S K A 6 1 0 0 0 0 3 2 0 0 0 1 0 0 2 3 0 0 0 1 0 0 19 1 1783.8701 P29966 P29966 12 30 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.0018028 66.325 By MS/MS By MS/MS By MS/MS 1 1 1 10908000 3222200 5389400 2296800 873 1205 928 2915;2916;2917 2059;2060;2061 2060 1559;1560 3 GEAAAERPGEAAVASSPSKANGQENGHVK QFSKTAAKGEAAAERP GQENGHVKVNGDASPA K G E V K V 7 1 2 0 0 1 4 4 1 0 0 2 0 0 2 3 0 0 0 2 0 0 29 2 2818.3594 P29966 P29966 12 40 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 4 1.8282E-07 62.404 By matching By MS/MS By MS/MS 1 1 1 9811500 2536800 4948900 2325800 874 1205 929 2918;2919;2920 2062;2063 2062 1559;1560 2 GECQAEGVLFFQGDREWFWDLATGTMK DAAVECHRGECQAEGV DLATGTMKERSWPAVG R G E M K E 2 1 0 2 1 2 3 4 0 0 2 1 1 3 0 0 2 2 0 1 0 0 27 1 3177.4324 P02790;Q9BS19 P02790 152 178 HPX Hemopexin yes no 3 0.002827 47.854 By matching By MS/MS 1 2 20286000 2818200 17467000 0 875 1098 930;931 2921;2922;2923 2064;2065 2064 84 2 GEEGSDDDETENGPKPK KKRRRHPKGEEGSDDD TENGPKPKKRRPPKAE K G E P K K 0 0 1 3 0 0 4 3 0 0 0 2 0 0 2 1 1 0 0 0 0 0 17 1 1802.7442 Q6PD62 Q6PD62 966 982 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 2 1.7795E-06 69.878 By MS/MS By MS/MS By matching 1 1 1 2630900 1026100 997430 607420 876 1553 932 2924;2925;2926 2066;2067 2066 2111;3430 0 GEFSASPMLK RSPIRQDRGEFSASPM FSASPMLKSGMSPEQS R G E L K S 1 0 0 0 0 0 1 1 0 0 1 1 1 1 1 2 0 0 0 0 0 0 10 0 1065.5165 Q9UQ35 Q9UQ35 1119 1128 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0044475 71.153 By matching By matching By MS/MS 1 1 1 3820700 1141000 1469200 1210500 877 1945 933 2927;2928;2929 2068 2068 2756 1 GEPAAAAAPEAGASPVEK ASPSAAEKGEPAAAAA AGASPVEKEAPAEGEA K G E E K E 7 0 0 0 0 0 3 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 18 0 1621.7948 P29966 P29966 88 105 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 8.2875E-10 91.622 By matching By MS/MS By MS/MS 1 1 1 12523000 2282100 6323300 3918100 878 1205 934 2930;2931;2932 2069;2070 2070 1561 2 GEPNVSYICSR GSAKQLVRGEPNVSYI NVSYICSRYYRAPELI R G E S R Y 0 1 1 0 1 0 1 1 0 1 0 0 0 0 1 2 0 0 1 1 0 0 11 0 1280.5819 P49840;A8MT37;P49841 P49840 273 283 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta yes no 2 3.7408E-07 134.84 By MS/MS By MS/MS By MS/MS 1 1 1 26101000 8964600 9130100 8006600 879 1263 935 2933;2934;2935 2071;2072;2073;2074;2075;2076;2077;2078 2077 1670;3804 8 GEQVSQNGLPAEQGSPR QQQWDTSKGEQVSQNG PAEQGSPRMAETVDTS K G E P R M 1 1 1 0 0 3 2 3 0 0 1 0 0 0 2 2 0 0 0 1 0 0 17 0 1752.8391 A0A087WUZ3;Q01082 A0A087WUZ3 2126 2142 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.0045701 54.355 By matching By matching By MS/MS 1 1 1 1889400 453550 847210 588620 880 45 936 2936;2937;2938 2079 2079 62 1 GESAEDKEHEEGRDSEEGPR NGEATSQKGESAEDKE RDSEEGPRCGSSEDLH K G E P R C 1 2 0 2 0 0 7 3 1 0 0 1 0 0 1 2 0 0 0 0 0 0 20 2 2241.937 Q7Z4V5;A0A087WX58;K7EPS6 Q7Z4V5 611 630 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 3 0.014403 54.355 By matching By MS/MS By matching 1 1 1 3194500 1246600 1310600 637230 881 1581 937 2939;2940;2941 2080 2080 2152 1 GEVPPKETPK PSQGAEAKGEVPPKET VPPKETPKKKKKFSFK K G E P K K 0 0 0 0 0 0 2 1 0 0 0 2 0 0 3 0 1 0 0 1 0 0 10 1 1080.5815 P49006 P49006 78 87 MARCKSL1 MARCKS-related protein yes yes 2;3 0.0032481 105.36 By MS/MS By MS/MS By MS/MS 6 5 5 38747000 12287000 14031000 12429000 882 1254 938 2942;2943;2944;2945;2946;2947;2948;2949;2950;2951;2952;2953;2954;2955;2956;2957 2081;2082;2083;2084;2085;2086;2087;2088;2089;2090;2091;2092;2093;2094;2095;2096;2097;2098;2099;2100;2101;2102;2103;2104 2083 3329 24 GEVPPKETPKK PSQGAEAKGEVPPKET PPKETPKKKKKFSFKK K G E K K K 0 0 0 0 0 0 2 1 0 0 0 3 0 0 3 0 1 0 0 1 0 0 11 2 1208.6765 P49006 P49006 78 88 MARCKSL1 MARCKS-related protein yes yes 2;3 1.0655E-05 130.19 By MS/MS By MS/MS By MS/MS 2 3 2 57537000 23348000 20457000 13732000 883 1254 939 2958;2959;2960;2961;2962;2963;2964 2105;2106;2107;2108;2109 2109 3329 4 GEWTCIAYSQLR CTCVGNGRGEWTCIAY CIAYSQLRDQCIVDDI R G E L R D 1 1 0 0 1 1 1 1 0 1 1 0 0 0 0 1 1 1 1 0 0 0 12 0 1482.6925 P02751 P02751 504 515 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 0.0027718 80.596 By MS/MS By MS/MS By MS/MS 1 1 1 2255400 1145300 554720 555360 884 1095 940 2965;2966;2967 2110;2111;2112 2110 3 GEYVLLEAALTDLR TNFTFNGRGEYVLLEA EAALTDLRVQARAQPG R G E L R V 2 1 0 1 0 0 2 1 0 0 4 0 0 0 0 0 1 0 1 1 0 0 14 0 1561.8352 Q9UGT4 Q9UGT4 469 482 SUSD2 Sushi domain-containing protein 2 yes yes 2 0.0034919 70.488 By matching By matching By MS/MS 1 1 1 3424400 1370900 868850 1184600 885 1902 941 2968;2969;2970 2113 2113 1 GFAFVQYVNER IVGCSVHKGFAFVQYV FVQYVNERNARAAVAG K G F E R N 1 1 1 0 0 1 1 1 0 0 0 0 0 2 0 0 0 0 1 2 0 0 11 0 1328.6513 G3V4W0;B4DY08;B2R5W2;G3V4C1;G3V2Q1;P07910;G3V4M8;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V555;G3V575;G3V576 G3V4W0 51 61 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2 0.013408 61.593 By MS/MS By matching By matching 1 1 1 1546800 662920 371460 512460 886 335 942 2971;2972;2973 2114 2114 1 GFEVVYMTEPIDEYCVQQLK FVERVRKRGFEVVYMT EYCVQQLKEFDGKSLV R G F L K E 0 0 0 1 1 2 3 1 0 1 1 1 1 1 1 0 1 0 2 3 0 0 20 0 2447.1389 P08238 P08238 507 526 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.0024318 53.773 By matching By MS/MS 1 1 898350 669300 0 229050 887 1126 943 2974;2975 2115 2115 94 1 GFGFVDFNSEEDAK DRETGSSKGFGFVDFN FNSEEDAKAAKEAMED K G F A K A 1 0 1 2 0 0 2 2 0 0 0 1 0 3 0 1 0 0 0 1 0 0 14 0 1560.6733 P19338;H7BY16 P19338 611 624 NCL Nucleolin yes no 2 0.00018437 85.958 By MS/MS By matching By matching 1 1 1 2512600 881140 1001800 629670 888 1175 944 2976;2977;2978 2116 2116 1 GFIDQNLSPTK TSTNAEVRGFIDQNLS DQNLSPTKGNISFVAF R G F T K G 0 0 1 1 0 1 0 1 0 1 1 1 0 1 1 1 1 0 0 0 0 0 11 0 1218.6245 F8WAY9;C9JTZ9;Q14188 F8WAY9 17 27 TFDP2 Transcription factor Dp-2 yes no 2 0.013325 67.252 By MS/MS 1 0 0 0 0 889 448 945 2979 2117 2117 591 1 GFLLLASLR VDAVRAEKGFLLLASL FLLLASLRQMKKTRGT K G F L R Q 1 1 0 0 0 0 0 1 0 0 4 0 0 1 0 1 0 0 0 0 0 0 9 0 988.60695 P07996;CON__Q28194 P07996 87 95 THBS1 Thrombospondin-1 yes no 2 0.005921 113.89 By MS/MS By matching By MS/MS 1 1 1 4179700 2299000 796650 1084000 + 890 1124 946 2980;2981;2982 2118;2119 2119 2 GFSDSGGGPPAK RGSLLLRRGFSDSGGG SGGGPPAKQRDLEGAV R G F A K Q 1 0 0 1 0 0 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 12 0 1075.4934 Q9H307;G3V5F0;G3V579 Q9H307 64 75 PNN Pinin yes no 2 0.00033674 101.72 By MS/MS By MS/MS By MS/MS 1 1 1 9228500 2940500 3740900 2547100 891 1819 947 2983;2984;2985 2120;2121;2122;2123;2124 2124 2551 5 GFSYLYGAWGR SVVQLNWRGFSYLYGA YLYGAWGRDYSPQHPN R G F G R D 1 1 0 0 0 0 0 3 0 0 1 0 0 1 0 1 0 1 2 0 0 0 11 0 1275.6037 Q6UX06 Q6UX06 266 276 OLFM4 Olfactomedin-4 yes yes 2 0.0014335 90.657 By MS/MS By matching By matching 1 1 1 5298200 2809800 1347600 1140800 892 1561 948 2986;2987;2988 2125 2125 1 GFTDSPHYSDHLNDSR RQKGQRIKGFTDSPHY SDHLNDSRLGAHEGLS K G F S R L 0 1 1 3 0 0 0 1 2 0 1 0 0 1 1 3 1 0 1 0 0 0 16 0 1846.7871 B4DGI9;Q99081;H0YNQ5 B4DGI9 71 86 TCF12 Transcription factor 12 yes no 3 0.0039667 50.102 By MS/MS By matching 1 1 1141800 522020 619810 0 893 342 949 2989;2990 2126 2126 470 1 GFYESLAK STFTMEKRGFYESLAK GFYESLAKVKPGNFKV R G F A K V 1 0 0 0 0 0 1 1 0 0 1 1 0 1 0 1 0 0 1 0 0 0 8 0 913.45453 Q9HB21 Q9HB21 343 350 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 2 0.011893 78.616 By MS/MS By MS/MS By matching 1 1 1 2100400 731520 686700 682200 894 1836 950 2991;2992;2993 2127;2128 2128 2580 2 GGAAGGALPTSPGPALGAK ________________ PGPALGAKGALKAGVG R G G A K G 5 0 0 0 0 0 0 6 0 0 2 1 0 0 3 1 1 0 0 0 0 0 19 0 1548.826 Q9UPR0 Q9UPR0 7 25 PLCL2 Inactive phospholipase C-like protein 2 yes yes 2 0.0028397 60.918 By MS/MS By MS/MS 1 1 2582900 1465800 1117100 0 895 1939 951 2994;2995 2129;2130 2129 2739 2 GGDSIGETPTPGASK AETPRTDRGGDSIGET TPTPGASKRKSRWDET R G G S K R 1 0 0 1 0 0 1 4 0 1 0 1 0 0 2 2 2 0 0 0 0 0 15 0 1372.647 O75533 O75533 319 333 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0010136 63.894 By MS/MS By matching 1 1 1582800 854240 0 728600 896 1035 952 2996;2997 2131 2131 3253;3254 1 GGETPGSEQWK LLTPDAQKGGETPGSE TPGSEQWKFQELSQPR K G G W K F 0 0 0 0 0 1 2 3 0 0 0 1 0 0 1 1 1 1 0 0 0 0 11 0 1174.5255 A0A087X2D8;O60271;D6RHI8 A0A087X2D8 223 233 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2 0.0121 74.237 By matching By MS/MS By matching 1 1 1 2813900 944450 987190 882240 897 114 953 2998;2999;3000 2132 2132 2905 1 GGGTPDANSLAPPGK FPPNSSGRGGGTPDAN NSLAPPGKAGGGSGPQ R G G G K A 2 0 1 1 0 0 0 4 0 0 1 1 0 0 3 1 1 0 0 0 0 0 15 0 1337.6575 Q5T171;Q9BRQ0 Q5T171 262 276 PYGO2 Pygopus homolog 2 yes no 2 0.013846 61.649 By MS/MS By matching By MS/MS 1 1 1 8309100 2893600 3078600 2337000 898 1500 954 3001;3002;3003 2133;2134 2133 3410 2 GGISWQSSIVHYMNR GMASSPGRGGISWQSS SIVHYMNRMTQSQAQA R G G N R M 0 1 1 0 0 1 0 2 1 2 0 0 1 0 0 3 0 1 1 1 0 0 15 0 1733.8308 Q14781 Q14781 248 262 CBX2 Chromobox protein homolog 2 yes yes 3 0.01676 42.382 By MS/MS 1 0 0 0 0 899 1420 955 3004 2135 2135 1897;1898 1 GGLLLPSTDHQR G G Q R 0 1 0 1 0 1 0 2 1 0 3 0 0 0 1 1 1 0 0 0 0 0 12 0 1292.6837 REV__Q6ZNK6 yes yes 2 0.013872 53.567 By matching By MS/MS By matching 1 2 1 35117000 10286000 24534000 296950 + 900 2007 956 3005;3006;3007;3008 2136 2136 2860 1 GGLLTSEEDSGFSTSPK KLNRCAIKGGLLTSEE SGFSTSPKDNSLPKKK K G G P K D 0 0 0 1 0 0 2 3 0 0 2 1 0 1 1 4 2 0 0 0 0 0 17 0 1710.7948 Q9UQR1 Q9UQR1 292 308 ZNF148 Zinc finger protein 148 yes yes 2 0.0016059 69.451 By matching By matching By MS/MS 1 1 1 2783400 973250 784500 1025600 901 1948 957 3009;3010;3011 2137 2137 2779;2780;3549 1 GGLSPANDTGAK EEDNSYNRGGLSPAND PANDTGAKKKKKKQKK R G G A K K 2 0 1 1 0 0 0 3 0 0 1 1 0 0 1 1 1 0 0 0 0 0 12 0 1086.5306 K7EN42;B7Z8J4;P30419 K7EN42 43 54 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 yes no 2 0.0015289 81.128 By MS/MS By MS/MS By MS/MS 1 1 1 14731000 4931200 5402900 4397200 902 376 958 3012;3013;3014 2138;2139;2140;2141 2139 502 4 GGNLPPVSPNDSGAK IIIKASAKGGNLPPVS SPNDSGAKIASNPLER K G G A K I 1 0 2 1 0 0 0 3 0 0 1 1 0 0 3 2 0 0 0 1 0 0 15 0 1408.6947 A0A087X0F1;Q9UK61 A0A087X0F1 461 475 FAM208A Protein FAM208A yes no 2 0.011612 49.066 By MS/MS By MS/MS By matching 2 2 1 4600500 1486800 2257900 855910 903 96 959 3015;3016;3017;3018;3019 2142;2143;2144 2143 116;117 3 GGPASPGGLQGLETR SWAMNMYRGGPASPGG GLQGLETRRLSLPSSK R G G T R R 1 1 0 0 0 1 1 5 0 0 2 0 0 0 2 1 1 0 0 0 0 0 15 0 1395.7106 C9JWC4;Q8NCD3 C9JWC4 384 398 HJURP Holliday junction recognition protein yes no 2 0.0095771 50.305 By matching By MS/MS By matching 1 1 1 5968500 2024200 2079900 1864400 904 452 960 3020;3021;3022 2145 2145 595 1 GGPGKLSPR DFALPSSRGGPGKLSP GPGKLSPRKGVSQTGT R G G P R K 0 1 0 0 0 0 0 3 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 867.49265 Q12888 Q12888 1356 1364 TP53BP1 Tumor suppressor p53-binding protein 1 yes yes 2 0.0038238 103.21 By MS/MS By MS/MS By MS/MS 1 1 1 11313000 3673700 4282300 3356600 905 1367 961 3023;3024;3025 2146;2147;2148 2147 1801 3 GGSGSGPTIEEVD GFGAQGPKGGSGSGPT GPTIEEVD________ K G G V D - 0 0 0 1 0 0 2 4 0 1 0 0 0 0 1 2 1 0 0 1 0 0 13 0 1203.5255 A0A0G2JIW1;P0DMV9;P0DMV8;V9GZ37 A0A0G2JIW1 630 642 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.0011571 80.014 By MS/MS 2 2689200 2689200 0 0 906 222 962 3026;3027 2149;2150 2150 303 2 GGSGSHNWGTVKDELTESPK GLKHEDKRGGSGSHNW DELTESPKYIQKQISY R G G P K Y 0 0 1 1 0 0 2 4 1 0 1 2 0 0 1 3 2 1 0 1 0 0 20 1 2084.9763 Q8NC51 Q8NC51 217 236 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3 1.88E-12 91.926 By MS/MS By MS/MS By matching 1 1 1 60950000 27481000 18860000 14609000 907 1649 963 3028;3029;3030 2151;2152 2152 2253;3461 2 GGSISVQVNSIKFDSE KKKRGSYRGGSISVQV NSIKFDSE________ R G G S E - 0 0 1 1 0 1 1 2 0 2 0 1 0 1 0 4 0 0 0 2 0 0 16 1 1665.821 A0A0A0MRM9;Q14978 A0A0A0MRM9 693 708 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 3.4864E-159 189.52 By MS/MS By MS/MS By MS/MS 1 1 1 25745000 7825700 8613400 9306000 908 137 964 3031;3032;3033 2153;2154;2155;2156;2157;2158;2159 2153 183 7 GGSPDLWK PESQKSSRGGSPDLWK GGSPDLWKSSFFIEPQ R G G W K S 0 0 0 1 0 0 0 2 0 0 1 1 0 0 1 1 0 1 0 0 0 0 8 0 858.42357 Q96JM3 Q96JM3 474 481 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.016829 70.908 By matching By MS/MS By matching 1 1 1 10362000 4083700 2933600 3344600 909 1743 965 3034;3035;3036 2160 2160 2397 1 GGVTGSPEASISGSK NFSKPKGKGGVTGSPE EASISGSKGDLKSSKA K G G S K G 1 0 0 0 0 0 1 4 0 1 0 1 0 0 1 4 1 0 0 1 0 0 15 0 1332.6521 Q09666 Q09666 5726 5740 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.00090231 73.802 By MS/MS By MS/MS By MS/MS 1 1 1 4107200 1329000 1498200 1280000 910 1359 966 3037;3038;3039 2161;2162;2163 2162 1786;1787 3 GHLPKLQMPSFK VPEGAGLKGHLPKLQM KLQMPSFKVPKVDLKG K G H F K V 0 0 0 0 0 1 0 1 1 0 2 2 1 1 2 1 0 0 0 0 0 0 12 1 1381.754 Q8IVF2 Q8IVF2 1409 1420 AHNAK2 Protein AHNAK2 yes no 3 0.0093309 54.198 By matching By MS/MS By matching 1 1 1 505430 134210 245100 126130 911 1607 967 3040;3041;3042 2164 2164 0 GHPHSASSPSER NNSSSETRGHPHSASS SASSPSERVFPMPLPR R G H E R V 1 1 0 0 0 0 1 1 2 0 0 0 0 0 2 4 0 0 0 0 0 0 12 0 1247.5643 C9JZP1;C9J470;E9PHA2;Q15003 C9JZP1 21 32 NCAPH Condensin complex subunit 2 yes no 2 0.0056895 67.749 By MS/MS By matching By matching 1 1 1 2539900 1289200 739590 511190 912 411 968 3043;3044;3045 2165 2165 548 1 GHTASESDEQQWPEEK GSQRSRKRGHTASESD EQQWPEEKRLKEDILE R G H E K R 1 0 0 1 0 2 4 1 1 0 0 1 0 0 1 2 1 1 0 0 0 0 16 0 1856.7813 Q9NTI5;A9IYQ1 Q9NTI5 1253 1268 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 0.0067737 50.95 By MS/MS By matching By matching 1 1 1 21085000 7642000 7344800 6098600 913 1860 969 3046;3047;3048 2166 2166 2623;2624 1 GHTASESDEQQWPEEKR GSQRSRKRGHTASESD QQWPEEKRLKEDILEN R G H K R L 1 1 0 1 0 2 4 1 1 0 0 1 0 0 1 2 1 1 0 0 0 0 17 1 2012.8824 Q9NTI5;A9IYQ1 Q9NTI5 1253 1269 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 0.0014019 75.319 By MS/MS By MS/MS By matching 1 1 1 11930000 4765100 4090100 3074600 914 1860 970 3049;3050;3051 2167;2168 2168 2623;2624 2 GIDVQQVSLVINYDLPTNR ITTDLLARGIDVQQVS NYDLPTNRENYIHRSR R G I N R E 0 1 2 2 0 2 0 1 0 2 2 0 0 0 1 1 1 0 1 3 0 0 19 0 2143.1273 E7EQG2;P60842;Q14240 E7EQG2 336 354 EIF4A2;EIF4A1 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 3 0.00081588 63.337 By MS/MS By MS/MS 1 1 1729700 0 787530 942160 915 529 971 3052;3053 2169;2170 2170 2 GIGTPPNTTPIK RFESQEMKGIGTPPNT PPNTTPIKNGSPEIKL K G I I K N 0 0 1 0 0 0 0 2 0 2 0 1 0 0 3 0 3 0 0 0 0 0 12 0 1194.6608 O96028;D6RIS1;D6R9V2 O96028 107 118 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2 0.016083 44.203 By MS/MS 1 0 0 0 0 916 1076 972 3054 2171 2171 3267;3268;3269 1 GIITDSFGR TIGVKDGRGIITDSFG IITDSFGRHRRALSTT R G I G R H 0 1 0 1 0 0 0 2 0 2 0 0 0 1 0 1 1 0 0 0 0 0 9 0 964.49779 C9JUH3;A0A0A0MT72;Q9BSQ5 C9JUH3 282 290 CCM2 Cerebral cavernous malformations 2 protein yes no 2 0.010014 68.355 By matching By matching By MS/MS 1 1 1 1854200 840580 518860 494780 917 164 973 3055;3056;3057 2172 2172 222 1 GILAADESTGSIAK HRIVAPGKGILAADES ESTGSIAKRLQSIGTE K G I A K R 3 0 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 14 0 1331.6933 J3KPS3;P04075;H3BUH7;H3BQN4;H3BPS8 J3KPS3 29 42 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 5.4389E-05 93.258 By matching By MS/MS By MS/MS 3 3 3 6893400 1833900 3673000 1386500 918 908 974;975 3058;3059;3060;3061;3062;3063;3064;3065;3066 2173;2174;2175;2176 2173 1219;1220;3213 4 GILAADESTGSIAKR HRIVAPGKGILAADES STGSIAKRLQSIGTEN K G I K R L 3 1 0 1 0 0 1 2 0 2 1 1 0 0 0 2 1 0 0 0 0 0 15 1 1487.7944 J3KPS3;P04075;H3BUH7;H3BQN4;H3BPS8 J3KPS3 29 43 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.0072951 57.788 By matching By MS/MS By matching 1 1 1 3686200 1438600 1233500 1014100 919 908 976 3067;3068;3069 2177 2177 1219;1220;3213 1 GILSLPHQASPVSR PTSPLNNKGILSLPHQ HQASPVSRTPSLPAVD K G I S R T 1 1 0 0 0 1 0 1 1 1 2 0 0 0 2 3 0 0 0 1 0 0 14 0 1460.81 O75925 O75925 494 507 PIAS1 E3 SUMO-protein ligase PIAS1 yes yes 2 0.0096618 52.5 By MS/MS By matching By matching 1 1 1 3940300 1319400 1504600 1116300 920 1044 977 3070;3071;3072 2178 2178 1400 1 GISPIVFDR KKERKRARGISPIVFD ISPIVFDRSGSSASES R G I D R S 0 1 0 1 0 0 0 1 0 2 0 0 0 1 1 1 0 0 0 1 0 0 9 0 1002.5498 J3QR07;Q96MU7 J3QR07 306 314 YTHDC1 YTH domain-containing protein 1 yes no 2 0.0043194 82.417 By MS/MS By matching By MS/MS 1 1 1 3708400 1221600 1464000 1022800 921 921 978 3073;3074;3075 2179;2180 2180 1232 2 GKASPFEEDQNR GPEKGDQKGKASPFEE PFEEDQNRDLKQGDDD K G K N R D 1 1 1 1 0 1 2 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 12 1 1376.6321 C9JW01;A0A0C4DG68;A0A0A0MR59;Q8TB72 C9JW01 133 144 PUM2 Pumilio homolog 2 yes no 2 0.0088115 69.03 By matching By MS/MS By MS/MS 1 1 1 4913100 1992700 1705900 1214500 922 127 979 3076;3077;3078 2181;2182 2182 168 2 GKDSLSDDGVDLK ________________ SDDGVDLKTQPVRNTE K G K L K T 0 0 0 4 0 0 0 2 0 0 2 2 0 0 0 2 0 0 0 1 0 0 13 1 1347.6518 P07948;E5RJ37 P07948 8 20 LYN Tyrosine-protein kinase Lyn yes no 2 6.0638E-12 115.83 By MS/MS By MS/MS By MS/MS 1 1 1 10453000 3578300 3591400 3283200 923 1123 980 3079;3080;3081 2183;2184;2185 2184 1468 3 GKELSDQATASPIVAR EDDSLDSKGKELSDQA TASPIVARTDLSNIPG K G K A R T 3 1 0 1 0 1 1 1 0 1 1 1 0 0 1 2 1 0 0 1 0 0 16 1 1641.8686 Q5JSH3 Q5JSH3 86 101 WDR44 WD repeat-containing protein 44 yes yes 2;3 0.0018266 60.621 By matching By MS/MS By matching 2 2 1 7239400 2740800 3321100 1177500 924 1486 981 3082;3083;3084;3085;3086 2186;2187 2186 1994;3404 2 GKGSPRPQAPK EEEEEKLKGKGSPRPQ SPRPQAPKANGTSALT K G K P K A 1 1 0 0 0 1 0 2 0 0 0 2 0 0 3 1 0 0 0 0 0 0 11 2 1121.6305 A0A0A0MRM9;Q14978 A0A0A0MRM9 544 554 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 0.0071571 83.243 By MS/MS By MS/MS By matching 1 1 1 46841000 11860000 25971000 9009600 925 137 982 3087;3088;3089 2188;2189 2188 184 2 GKIEVLDSPASK LPNSEGGKGKIEVLDS VLDSPASKKKK_____ K G K S K K 1 0 0 1 0 0 1 1 0 1 1 2 0 0 1 2 0 0 0 1 0 0 12 1 1242.682 Q8N5I9 Q8N5I9 171 182 C12orf45 Uncharacterized protein C12orf45 yes yes 2 0.013499 55.98 By matching By MS/MS By matching 1 1 1 2298700 755390 873010 670360 926 1637 983 3090;3091;3092 2190 2190 2243 0 GKLEAIITPPPAK LAKKRGSKGKLEAIIT IITPPPAKKAKSPSQK K G K A K K 2 0 0 0 0 0 1 1 0 2 1 2 0 0 3 0 1 0 0 0 0 0 13 1 1333.7969 D6RCF2;O75367 D6RCF2 122 134 H2AFY Histone H2A;Core histone macro-H2A.1 yes no 2 0.0072361 76.282 By MS/MS By matching By MS/MS 1 1 1 2498200 803000 861240 833930 927 493 984 3093;3094;3095 2191;2192 2192 3041 2 GKLPESPK PGGEREERGKLPESPK GKLPESPKRAEEIWQQ R G K P K R 0 0 0 0 0 0 1 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 8 1 854.48617 E9PLT2;E9PKP7;P17480 E9PLT2 66 73 UBTF Nucleolar transcription factor 1 yes no 2 0.014403 107.45 By MS/MS By MS/MS By MS/MS 1 1 1 3982900 1237500 1537400 1208000 928 601 985 3096;3097;3098 2193;2194;2195 2194 809 3 GKLSAEENPDDSEVPSSSGINSTK EKKSLQEKGKLSAEEN SSGINSTKSQDKDVNE K G K T K S 1 0 2 2 0 0 3 2 0 1 1 2 0 0 2 6 1 0 0 1 0 0 24 1 2447.13 Q9Y5Q9 Q9Y5Q9 40 63 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 3 0.00034347 66.014 By matching By MS/MS By MS/MS 1 1 1 24884000 10565000 7802200 6517200 929 1974 986 3099;3100;3101 2196;2197 2197 2823 2 GKSPVPKSPVEEK PKSPVEEKGKSPVPKS PKSPVEEKGKSPVPKS K G K E K G 0 0 0 0 0 0 2 1 0 0 0 3 0 0 3 2 0 0 0 2 0 0 13 2 1380.7613 P07197 P07197 626 638 NEFM Neurofilament medium polypeptide yes no 2 0.01301 65.511 By MS/MS By matching By matching 1 1 1 2599100 1082000 894750 622330 930 1116 987 3102;3103;3104 2198 2198 1460;1461 0 GKSSEPVVIMK QRVAPRARGKSSEPVV SEPVVIMKRSLRTSAK R G K M K R 0 0 0 0 0 0 1 1 0 1 0 2 1 0 1 2 0 0 0 2 0 0 11 1 1173.6427 P46013 P46013 3039 3049 MKI67 Antigen KI-67 yes yes 2 0.011514 66.326 By matching By MS/MS By matching 1 1 1 2019000 671500 723020 624490 931 1241 988 3105;3106;3107 2199 2199 1605 1 GKTPEEIRK KTVANMIKGKTPEEIR KTPEEIRKTFNIK___ K G K R K T 0 1 0 0 0 0 2 1 0 1 0 2 0 0 1 0 1 0 0 0 0 0 9 2 1056.5928 E7ERH2;F8W8N3;E5RJR5;P63208 E7ERH2 129 137 SKP1 S-phase kinase-associated protein 1 yes no 3 0.013025 78.149 By matching By MS/MS 1 1 3740200 1790400 1949700 0 932 514 989 3108;3109 2200 2200 3049 1 GLAAGSAETLPANFR KFRPKDIRGLAAGSAE ETLPANFRVTSSMSSP R G L F R V 4 1 1 0 0 0 1 2 0 0 2 0 0 1 1 1 1 0 0 0 0 0 15 0 1473.7576 Q13136 Q13136 1151 1165 PPFIA1 Liprin-alpha-1 yes yes 2 9.2007E-18 120.92 By MS/MS By MS/MS By MS/MS 1 1 1 17664000 7609600 5354700 4699700 933 1378 990 3110;3111;3112 2201;2202;2203 2202 3362 3 GLAEVQQDGEAEEGATSDGEKKR EEITCLEKGLAEVQQD TSDGEKKREGVTPWAS K G L K R E 3 1 0 2 0 2 5 4 0 0 1 2 0 0 0 1 1 0 0 1 0 0 23 2 2403.115 Q02952 Q02952 582 604 AKAP12 A-kinase anchor protein 12 yes yes 3 0.00097542 70.413 By MS/MS By matching By MS/MS 1 1 1 24554000 8136300 10160000 6258300 934 1336 991 3113;3114;3115 2204;2205 2205 1749;3346 2 GLAGPPASPGK GTPTLPPKGLAGPPAS GPPASPGKAQPPKPER K G L G K A 2 0 0 0 0 0 0 3 0 0 1 1 0 0 3 1 0 0 0 0 0 0 11 0 950.51853 Q9P206 Q9P206 538 548 KIAA1522 Uncharacterized protein KIAA1522 yes yes 2 0.0066428 65.563 By MS/MS By MS/MS By MS/MS 1 1 1 2334200 898640 899770 535760 935 1888 992 3116;3117;3118 2206;2207;2208 2206 2664 3 GLAITFVSDENDAK RAGRFGTKGLAITFVS VSDENDAKILNDVQDR K G L A K I 2 0 1 2 0 0 1 1 0 1 1 1 0 1 0 1 1 0 0 1 0 0 14 0 1478.7253 H0Y400;A0A0G2JJZ9;O00148;Q13838 H0Y400 149 162 DDX39B;DDX39A ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B yes no 2 0.00018437 85.958 By matching By MS/MS By matching 1 1 1 2140500 866690 817020 456810 936 223 993 3119;3120;3121 2209 2209 1 GLAPNTPGK PRTPSKRRGLAPNTPG LAPNTPGKARKLNTTT R G L G K A 1 0 1 0 0 0 0 2 0 0 1 1 0 0 2 0 1 0 0 0 0 0 9 0 853.46577 G3V3N7;O43663;H0YL53 G3V3N7 93 101 PRC1 Protein regulator of cytokinesis 1 yes no 2 0.012011 78.098 By MS/MS 1 0 0 0 0 937 718 994 3122 2210 2210 3147 1 GLCAIAQAESLR YAEKVATRGLCAIAQA IAQAESLRYKLLGGLA R G L L R Y 3 1 0 0 1 1 1 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 12 0 1287.6605 P23396;F2Z2S8;H0YF32;H0YCJ7 P23396 95 106 RPS3 40S ribosomal protein S3 yes no 2 0.0046059 73.841 By MS/MS By MS/MS 1 1 673050 282450 390600 0 938 1191 995 3123;3124 2211;2212 2212 2 GLDKEVSYNWDPK LPGKFLGRGLDKEVSY VSYNWDPKDAASKPSG R G L P K D 0 0 1 2 0 0 1 1 0 0 1 2 0 0 1 1 0 1 1 1 0 0 13 1 1549.7413 O14654 O14654 840 852 IRS4 Insulin receptor substrate 4 yes yes 2;3 3.7195E-13 127.51 By MS/MS By MS/MS By MS/MS 2 1 2 6282700 2865100 1821400 1596300 939 982 996 3125;3126;3127;3128;3129 2213;2214;2215;2216;2217 2213 1308;3739 5 GLGEHEMEEDEEDYESSAK RGSRLLVRGLGEHEME EDYESSAKLLGMSFMN R G L A K L 1 0 0 2 0 0 7 2 1 0 1 1 1 0 0 2 0 0 1 0 0 0 19 0 2182.8485 Q9UIQ6 Q9UIQ6 57 75 LNPEP Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form yes yes 3 0.018132 42.981 By MS/MS 1 0 0 0 0 940 1908 997 3130 2218 2218 3928 1 GLGHPPSSPLLK SPPGFSAKGLGHPPSS PPSSPLLKKTPLALAG K G L L K K 0 0 0 0 0 0 0 2 1 0 3 1 0 0 3 2 0 0 0 0 0 0 12 0 1201.6819 B9EGQ5;M0QXA7;O95785 B9EGQ5 157 168 WIZ Protein Wiz yes no 2 0.00074931 86.463 By MS/MS By MS/MS By MS/MS 1 1 1 4196000 1464400 1466900 1264800 941 391 998 3131;3132;3133 2219;2220;2221;2222;2223;2224 2221 515;516 6 GLGLDESGLAK IASHSHVKGLGLDESG LDESGLAKQAASGLVG K G L A K Q 1 0 0 1 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 0 0 0 11 0 1058.5608 Q9Y265 Q9Y265 23 33 RUVBL1 RuvB-like 1 yes yes 2 0.017766 65.305 By MS/MS 1 0 0 0 0 942 1951 999 3134 2225 2225 1 GLGPPSPPAPPR SLPGSPSRGLGPPSPP PSPPAPPRGPAGEAGA R G L P R G 1 1 0 0 0 0 0 2 0 0 1 0 0 0 6 1 0 0 0 0 0 0 12 0 1141.6244 A0A140TA73;Q13425 A0A140TA73 90 101 SNTB2 Beta-2-syntrophin yes no 2 0.0060845 66.989 By MS/MS By MS/MS By MS/MS 1 1 1 5453400 1786800 1839100 1827500 943 268 1000 3135;3136;3137 2226;2227;2228 2228 351 3 GLGTDEDSLIEIICSR SELKASMKGLGTDEDS LIEIICSRTNQELQEI K G L S R T 0 1 0 2 1 0 2 2 0 3 2 0 0 0 0 2 1 0 0 0 0 0 16 0 1776.8564 H0YMD0;H0YMU9;H0YN42;P07355;H0YMM1;H0YKS4;H0YNA0;H0YN28;H0YL33;H0YNP5;H0YM50;A6NMY6;H0YLE2;H0YN52 H0YMD0 120 135 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 2 1.5556E-08 101.39 By MS/MS By MS/MS 1 1 2319100 0 1040400 1278700 944 806 1001 3138;3139 2229;2230;2231 2229 3 GLGYSGLPEKK LKTILECRGLGYSGLP YSGLPEKKDVRELVEK R G L K K D 0 0 0 0 0 0 1 3 0 0 2 2 0 0 1 1 0 0 1 0 0 0 11 1 1147.6237 A0A140T963;O00237 A0A140T963 56 66 RNF103 E3 ubiquitin-protein ligase RNF103 yes no 2 0.010725 66.351 By MS/MS By matching 1 1 15449000 0 8844900 6603900 945 266 1002 3140;3141 2232 2232 349 1 GLKEGMNPSYDEYADSDEDQHDAYLER KKLNIKNRGLKEGMNP QHDAYLERMKEEGKIR R G L E R M 2 1 1 5 0 1 4 2 1 0 2 1 1 0 1 2 0 0 3 0 0 0 27 1 3146.3047 Q08945 Q08945 429 455 SSRP1 FACT complex subunit SSRP1 yes yes 3;4 1.3712E-05 60.814 By MS/MS By MS/MS By MS/MS 2 1 2 19538000 14420000 1551300 3566600 946 1356 1003 3142;3143;3144;3145;3146 2233;2234;2235 2235 1778;3829 2 GLKPGVVYEGQLISIQQYGHQEVTR HLNSYTIKGLKPGVVY YGHQEVTRFDFTTTST K G L T R F 0 1 0 0 0 4 2 4 1 2 2 1 0 0 1 1 1 0 2 3 0 0 25 1 2798.4715 P02751 P02751 670 694 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 4 3.9675E-05 56.485 By MS/MS By MS/MS 1 1 2010700 1381200 0 629510 947 1095 1004 3147;3148 2236;2237 2236 2 GLLYDSDEEDEERPAR RGLGRMRRGLLYDSDE EDEERPARKRRQVERA R G L A R K 1 2 0 3 0 0 4 1 0 0 2 0 0 0 1 1 0 0 1 0 0 0 16 1 1892.8388 P49736 P49736 134 149 MCM2 DNA replication licensing factor MCM2 yes yes 2;3 4.6816E-12 108.58 By MS/MS By MS/MS By matching 2 2 2 528050000 190210000 185100000 152740000 948 1258 1005 3149;3150;3151;3152;3153;3154 2238;2239;2240 2238 1650;3803 3 GLMAGGRPEGQYSEDEDTDTDEYKEAK AAGLLAARGLMAGGRP TDEYKEAKASINPVTG R G L A K A 2 1 0 4 0 1 5 4 0 0 1 2 1 0 1 1 2 0 2 0 0 0 27 2 2990.2724 H0YE35;H0YC88;Q9NPQ8 H0YE35 32 58 RIC8A Synembryn-A yes no 3 2.6845E-05 58.952 By MS/MS By matching By matching 1 1 1 13896000 7000600 3897700 2997900 949 783 1006 3155;3156;3157 2241 2241 56 1069 1 GLNSSFETSPK SSFQGSKRGLNSSFET SSFETSPKKVKWSSTV R G L P K K 0 0 1 0 0 0 1 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 11 0 1165.5615 M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63 M0QZ79 51 61 VRK3 Inactive serine/threonine-protein kinase VRK3 yes no 2 5.2006E-06 130.69 By MS/MS By MS/MS By MS/MS 1 1 1 7364000 2523700 2460800 2379400 950 958 1007 3158;3159;3160 2242;2243;2244;2245 2242 1262 4 GLPPSMER DRVGRQERGLPPSMER GLPPSMERGYPPPRDS R G L E R G 0 1 0 0 0 0 1 1 0 0 1 0 1 0 2 1 0 0 0 0 0 0 8 0 885.43784 P38159;H3BUY5 P38159 348 355 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 2 0.012227 79.986 By matching By MS/MS 1 1 1479500 784760 694740 0 951 1227 1008 3161;3162 2246 2246 1587 1 GLQHLYALVLVNNK ELRKDDFKGLQHLYAL ALVLVNNKISKIHEKA K G L N K I 1 0 2 0 0 1 0 1 1 0 4 1 0 0 0 0 0 0 1 2 0 0 14 0 1580.9039 P21810 P21810 112 125 BGN Biglycan yes yes 2;3 5.264E-05 93.096 By MS/MS By MS/MS By MS/MS 2 2 2 6068800 3441200 1497100 1130600 952 1183 1009 3163;3164;3165;3166;3167;3168 2247;2248;2249;2250 2248 4 GLSDHVSLDGQELGTR CDSVEHLRGLSDHVSL DGQELGTRSGGRRGSD R G L T R S 0 1 0 2 0 1 1 3 1 0 3 0 0 0 0 2 1 0 0 1 0 0 16 0 1682.8224 Q7L8J4 Q7L8J4 356 371 SH3BP5L SH3 domain-binding protein 5-like yes yes 3 0.0038143 50.305 By MS/MS By matching By matching 1 1 1 1375200 526790 489530 358890 953 1573 1010 3169;3170;3171 2251 2251 2140 1 GLSEDTTEETLK PSKTLFVKGLSEDTTE DTTEETLKESFDGSVR K G L L K E 0 0 0 1 0 0 3 1 0 0 2 1 0 0 0 1 3 0 0 0 0 0 12 0 1321.6249 P19338;H7BY16 P19338 578 589 NCL Nucleolin yes no 2 0.00052121 96.067 By MS/MS By MS/MS By MS/MS 1 1 1 2968800 763550 1217600 987720 954 1175 1011 3172;3173;3174 2252;2253;2254 2252 1525 3 GLSSAGGGSPHREDAQPEHSASAR KINYSVLRGLSSAGGG PEHSASARKLSRRRTP R G L A R K 4 2 0 1 0 1 2 4 2 0 1 0 0 0 2 5 0 0 0 0 0 0 24 1 2360.0854 Q92994 Q92994 545 568 BRF1 Transcription factor IIIB 90 kDa subunit yes yes 3 0.017331 40.723 By MS/MS By matching By matching 1 1 1 3218600 1031500 1534000 653030 955 1717 1012 3175;3176;3177 2255 2255 2358 1 GLSSSEKDNIER SWVSPRKRGLSSSEKD SEKDNIERQAIENCER R G L E R Q 0 1 1 1 0 0 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 12 1 1333.6474 Q8IYH5 Q8IYH5 87 98 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.0074085 70.373 By MS/MS By matching 1 1 5430400 0 3163000 2267400 956 1619 1013 3178;3179 2256 2256 2219 1 GLSVDSAQEVK SVSSSIKRGLSVDSAQ VDSAQEVKRFRTATGA R G L V K R 1 0 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 11 0 1131.5772 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1771 1781 TRRAP Transformation/transcription domain-associated protein yes no 2 1.0472E-05 117.95 By MS/MS By MS/MS By matching 1 1 1 5354100 1934700 1875000 1544400 957 624 1014 3180;3181;3182 2257;2258 2257 844 2 GLSVDSAQEVKR SVSSSIKRGLSVDSAQ DSAQEVKRFRTATGAI R G L K R F 1 1 0 1 0 1 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 0 12 1 1287.6783 H0Y4W2;F2Z2U4;Q9Y4A5 H0Y4W2 1771 1782 TRRAP Transformation/transcription domain-associated protein yes no 2 4.5178E-05 106.54 By matching By MS/MS By MS/MS 1 1 1 7610100 3162500 2360900 2086700 958 624 1015 3183;3184;3185 2259;2260 2259 844 2 GLTSLYGLILNNNK EIKENDFKGLTSLYGL GLILNNNKLTKIHPKA K G L N K L 0 0 3 0 0 0 0 2 0 1 4 1 0 0 0 1 1 0 1 0 0 0 14 0 1518.8406 Q9BXN1;Q5TBF2 Q9BXN1 124 137 ASPN Asporin yes no 2 1.2801E-12 119.68 By MS/MS By matching By matching 1 1 1 2997400 1703100 519200 775080 959 1794 1016 3186;3187;3188 2261 2261 1 GLTSVINQK LPCILNARGLTSVINQ LTSVINQKLKDDEVAQ R G L Q K L 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 9 0 958.54475 P07195 P07195 300 308 LDHB L-lactate dehydrogenase B chain yes yes 2 0.0056988 88.942 By matching By MS/MS By matching 1 1 1 2568300 601780 1707100 259430 960 1115 1017 3189;3190;3191 2262 2262 1 GLVAAYSGDSDNEEELVER DEENPLKRGLVAAYSG NEEELVERLESEEEKL R G L E R L 2 1 1 2 0 0 4 2 0 0 2 0 0 0 0 2 0 0 1 2 0 0 19 0 2051.9284 P52756 P52756 615 633 RBM5 RNA-binding protein 5 yes yes 2 0.0016624 71.558 By MS/MS By matching By matching 1 1 1 6608900 1987700 2340900 2280300 961 1285 1018 3192;3193;3194 2263 2263 1694 1 GLWSTDSAEEDKETK RRLSGEERGLWSTDSA AEEDKETKRNESKEKY R G L T K R 1 0 0 2 0 0 3 1 0 0 1 2 0 0 0 2 2 1 0 0 0 0 15 1 1694.7635 A0A0A0MT47;Q99549 A0A0A0MT47 171 185 MPHOSPH8 M-phase phosphoprotein 8 yes no 2 1.0748E-07 74.853 By MS/MS By matching 1 1 4347500 0 2358700 1988900 962 161 1019 3195;3196 2264 2264 2923 0 GLYDGPVCEVSVTPK AELRGVPRGLYDGPVC CEVSVTPKTVTPASSA R G L P K T 0 0 0 1 1 0 1 2 0 0 1 1 0 0 2 1 1 0 1 3 0 0 15 0 1619.7865 A0A1C7CYX9;Q16555 A0A1C7CYX9 602 616 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 0.013274 62.377 By MS/MS By MS/MS By matching 1 1 1 4064400 2383200 1508200 172970 963 290 1020 3197;3198;3199 2265;2266 2266 2968 2 GMKDDDYDDQLC DFARLRLKGMKDDDYD DDYDDQLC________ K G M L C - 0 0 0 5 1 1 0 1 0 0 1 1 1 0 0 0 0 0 1 0 0 0 12 1 1473.5388 Q68DZ5;P32121 Q68DZ5 206 217 DKFZp686L0365;ARRB2 Beta-arrestin-2 yes no 2 0.010645 56.013 By matching By MS/MS By matching 1 1 1 2238000 440000 925130 872860 964 1214 1021 3200;3201;3202 2267 2267 3778 1 GMSVYGLGR TNKVASQKGMSVYGLG MSVYGLGRQVYDPKYC K G M G R Q 0 1 0 0 0 0 0 3 0 0 1 0 1 0 0 1 0 0 1 1 0 0 9 0 938.46439 Q15417 Q15417 257 265 CNN3 Calponin-3 yes yes 2 0.0083849 75.109 By matching By MS/MS By MS/MS 1 1 1 5862900 1726200 2199900 1936800 965 1440 1022 3203;3204;3205 2268;2269 2268 3848 2 GNAEGSSDEEGKLVIDEPAK AEGDGDKKGNAEGSSD LVIDEPAKEKNEKGAL K G N A K E 2 0 1 2 0 0 4 3 0 1 1 2 0 0 1 2 0 0 0 1 0 0 20 1 2043.9597 P51858 P51858 127 146 HDGF Hepatoma-derived growth factor yes yes 2 0.0090803 69.92 By MS/MS By MS/MS By matching 2 2 2 19631000 4799700 9596300 5235400 966 1279 1023;1024 3206;3207;3208;3209;3210;3211 2270;2271 2271 1686;1687 2 GNAEGSSDEEGKLVIDEPAKEK AEGDGDKKGNAEGSSD IDEPAKEKNEKGALKR K G N E K N 2 0 1 2 0 0 5 3 0 1 1 3 0 0 1 2 0 0 0 1 0 0 22 2 2301.0972 P51858 P51858 127 148 HDGF Hepatoma-derived growth factor yes yes 3 0.00088745 69.581 By MS/MS By MS/MS By MS/MS 1 1 1 72649000 22392000 32465000 17793000 967 1279 1025 3212;3213;3214 2272;2273;2274 2272 1686;1687 3 GNDPLTSSPGR SSPAQRRRGNDPLTSS PLTSSPGRSSRRTDAL R G N G R S 0 1 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 11 0 1099.5258 P49736;C9J013;C9JZ21;F8WDM3 P49736 20 30 MCM2 DNA replication licensing factor MCM2 yes no 2 1.6377E-144 195.71 By MS/MS By MS/MS By MS/MS 1 1 1 66806000 22486000 25896000 18424000 968 1258 1026 3215;3216;3217 2275;2276;2277;2278;2279;2280;2281 2279 1651 7 GNIETTSEDGQVFSPK EDDVGIERGNIETTSE DGQVFSPKKGQKKKSI R G N P K K 0 0 1 1 0 1 2 2 0 1 0 1 0 1 1 2 2 0 0 1 0 0 16 0 1707.7952 Q5T200 Q5T200 980 995 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 0.0022728 60.307 By MS/MS By matching By matching 1 1 1 9720000 3445700 4007300 2266900 969 1501 1027 3218;3219;3220 2282;2283 2282 2020 2 GNSRPGTPSAEGGSTSSTLR KPSGGSSRGNSRPGTP GSTSSTLRAAASKLEQ R G N L R A 1 2 1 0 0 0 1 4 0 0 1 0 0 0 2 5 3 0 0 0 0 0 20 1 1917.914 M0QXD6;P35269 M0QXD6 299 318 GTF2F1 General transcription factor IIF subunit 1 yes no 3 0.0026427 54.049 By MS/MS By MS/MS By matching 1 2 2 8773400 2274400 3407400 3091700 970 957 1028;1029 3221;3222;3223;3224;3225 2284;2285 2285 1261;3227 2 GNVVPSPLPTR ERSPSPLRGNVVPSPL VPSPLPTRRTRTFSAT R G N T R R 0 1 1 0 0 0 0 1 0 0 1 0 0 0 3 1 1 0 0 2 0 0 11 0 1135.635 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 36 46 CARHSP1 Calcium-regulated heat stable protein 1 yes no 2 0.0072321 63.181 By MS/MS By MS/MS By MS/MS 1 1 1 8688100 2517300 3775700 2395100 971 826 1030 3226;3227;3228 2286;2287;2288 2287 1110 3 GPAGEAGASPPVR PSPPAPPRGPAGEAGA AGASPPVRRVRVVKQE R G P V R R 3 1 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 13 0 1164.5887 A0A140TA73;Q13425 A0A140TA73 102 114 SNTB2 Beta-2-syntrophin yes no 2 2.4032E-12 120.6 By MS/MS By MS/MS By MS/MS 1 1 1 5238300 2156300 1872900 1209100 972 268 1031 3229;3230;3231 2289;2290;2291;2292;2293 2289 352 5 GPAGEAGASPPVRR PSPPAPPRGPAGEAGA GASPPVRRVRVVKQEA R G P R R V 3 2 0 0 0 0 1 3 0 0 0 0 0 0 3 1 0 0 0 1 0 0 14 1 1320.6898 A0A140TA73;Q13425 A0A140TA73 102 115 SNTB2 Beta-2-syntrophin yes no 2 0.01284 54.951 By matching By MS/MS By matching 1 1 1 5096500 1731000 2528800 836730 973 268 1032 3232;3233;3234 2294 2294 352 1 GPAYGLSR ________________ GPAYGLSREVQQKIEK R G P S R E 1 1 0 0 0 0 0 2 0 0 1 0 0 0 1 1 0 0 1 0 0 0 8 0 819.4239 X6RJP6;P37802 X6RJP6 5 12 TAGLN2 Transgelin-2 yes no 2 0.014751 87.754 By MS/MS By MS/MS By matching 1 1 1 2187200 668650 794940 723600 974 1226 1033 3235;3236;3237 2295;2296;2297 2295 3782 3 GPGEPDSPTPLHPPTPPILSTDR IIPAPKPKGPGEPDSP PPILSTDRSREDSPEL K G P D R S 0 1 0 2 0 0 1 2 1 1 2 0 0 0 8 2 3 0 0 0 0 0 23 0 2377.1914 Q03164 Q03164 1831 1853 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 0.00071944 56.9 By MS/MS 1 633120 633120 0 0 975 1339 1034 3238 2298 2298 1754 1 GPHHLDNSSPGPGSEAR GLSSLPPRGPHHLDNS PGPGSEARGINGGPSR R G P A R G 1 1 1 1 0 0 1 3 2 0 1 0 0 0 3 3 0 0 0 0 0 0 17 0 1713.7819 H3BUF6;Q8WWM7 H3BUF6 383 399 ATXN2L Ataxin-2-like protein yes no 3 0.0013499 58.564 By matching By matching By MS/MS 1 1 1 2651400 711860 1291300 648270 976 850 1035 3239;3240;3241 2299 2299 1143;1144 1 GPPASSPAPAPK SLANTQPRGPPASSPA SSPAPAPKFSPVTPKF R G P P K F 3 0 0 0 0 0 0 1 0 0 0 1 0 0 5 2 0 0 0 0 0 0 12 0 1075.5662 H0Y2Y8;Q15942;H7C3D3 H0Y2Y8 222 233 ZYX Zyxin yes no 2 0.0017231 79.283 By MS/MS By MS/MS By MS/MS 1 2 2 2287600 522890 1047500 717240 977 744 1036 3242;3243;3244;3245;3246 2300;2301;2302;2303 2302 1017;1018 4 GPPDFSSDEEREPTPVLGSGAAAAGR LPAGTNSKGPPDFSSD SGAAAAGRSRAAVGRK K G P G R S 4 2 0 2 0 0 3 4 0 0 1 0 0 1 4 3 1 0 0 1 0 0 26 1 2569.2045 G5E972;P42167;P42166 G5E972 61 86 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 3 3.3176E-14 87.793 By MS/MS By MS/MS By MS/MS 3 4 3 77359000 29822000 26618000 20918000 978 734;1237 1037;1038 3247;3248;3249;3250;3251;3252;3253;3254;3255;3256 2304;2305;2306;2307;2308;2309;2310;2311;2312;2313;2314;2315;2316;2317;2318;2319;2320 2304 994;995;3154 17 GPPQSPVFEGVYNNSR ARGQSTGKGPPQSPVF EGVYNNSRMLHFLTAV K G P S R M 0 1 2 0 0 1 1 2 0 0 0 0 0 1 3 2 0 0 1 2 0 0 16 0 1746.8325 H3BUF6;Q8WWM7;H3BSK9 H3BUF6 107 122 ATXN2L Ataxin-2-like protein yes no 2 0.0018546 63.709 By MS/MS By MS/MS By MS/MS 1 1 1 5145800 1561600 1945600 1638700 979 850 1039 3257;3258;3259 2321;2322;2323;2324 2322 1145 4 GPPSPPAPVMHSPSR KINKKIPRGPPSPPAP PVMHSPSRKMTVKEQQ R G P S R K 1 1 0 0 0 0 0 1 1 0 0 0 1 0 6 3 0 0 0 1 0 0 15 0 1512.7507 G3V4X8;G3V3A4;Q13573 G3V4X8 59 73 SNW1 SNW domain-containing protein 1 yes no 2;3 0.0011125 68.49 By MS/MS By MS/MS By MS/MS 5 3 4 9904900 3458900 2972000 3474100 980 717 1040;1041 3260;3261;3262;3263;3264;3265;3266;3267;3268;3269;3270;3271 2325;2326;2327;2328;2329;2330 2325 50 966;967;968 6 GPPSPPAPVMHSPSRK KINKKIPRGPPSPPAP VMHSPSRKMTVKEQQE R G P R K M 1 1 0 0 0 0 0 1 1 0 0 1 1 0 6 3 0 0 0 1 0 0 16 1 1640.8457 G3V4X8;G3V3A4;Q13573 G3V4X8 59 74 SNW1 SNW domain-containing protein 1 yes no 3 0.0009478 62.287 By MS/MS By MS/MS By MS/MS 2 1 2 13989000 5818200 2967600 5202900 981 717 1042;1043 3272;3273;3274;3275;3276 2331;2332;2333;2334;2335;2336;2337 2333 50 966;967;968 7 GPQPPTVSPIR QKQNDTPKGPQPPTVS PPTVSPIRSSRPPPAK K G P I R S 0 1 0 0 0 1 0 1 0 1 0 0 0 0 4 1 1 0 0 1 0 0 11 0 1147.635 P46087 P46087 779 789 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 5.536E-06 130.56 By MS/MS By MS/MS By MS/MS 1 1 1 16917000 5849500 6044100 5022900 982 1242 1044 3277;3278;3279 2338;2339;2340;2341;2342;2343 2341 1613 6 GPSSVEDIK EKTPKTPKGPSSVEDI PSSVEDIKAKMQASIE K G P I K A 0 0 0 1 0 0 1 1 0 1 0 1 0 0 1 2 0 0 0 1 0 0 9 0 930.46583 P06748 P06748 240 248 NPM1 Nucleophosmin yes yes 2 0.0023832 97.597 By MS/MS By MS/MS By MS/MS 2 2 1 5347200 1782100 2655800 909230 983 1114 1045;1046 3280;3281;3282;3283;3284 2344;2345;2346;2347 2344 1458 4 GPTSTSIDNIDGTPVRDER SHPSDFQRGPTSTSID GTPVRDERSGTPTQDE R G P E R S 0 2 1 3 0 0 1 2 0 2 0 0 0 0 2 2 3 0 0 1 0 0 19 1 2028.9712 Q5VT52 Q5VT52 711 729 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.006877 66.826 By MS/MS By matching By MS/MS 1 1 1 13854000 5379000 5048500 3427000 984 1518 1047 3285;3286;3287 2348;2349 2349 3422 2 GPVSGTEPEPVYSMEAADYR FKAELSYRGPVSGTEP SMEAADYREASSQQGL R G P Y R E 2 1 0 1 0 0 3 2 0 0 0 0 1 0 3 2 1 0 2 2 0 0 20 0 2153.9575 Q14247;H0YEV2;H0YCD9 Q14247 435 454 CTTN Src substrate cortactin yes no 2;3 3.6345E-36 122.66 By MS/MS By MS/MS By MS/MS 4 5 5 31946000 8321300 12987000 10638000 985 1408 1048;1049;1050 3288;3289;3290;3291;3292;3293;3294;3295;3296;3297;3298;3299;3300;3301 2350;2351;2352;2353;2354;2355;2356;2357;2358;2359;2360;2361;2362;2363 2354 141 1877;3838;3839 14 GQSQLSNPTDDSWK IDKNPSERGQSQLSNP NPTDDSWKGRPYANQK R G Q W K G 0 0 1 2 0 2 0 1 0 0 1 1 0 0 1 3 1 1 0 0 0 0 14 0 1561.7009 Q9Y6D5 Q9Y6D5 1523 1536 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.0045244 62.035 By matching By MS/MS By matching 1 1 1 3540400 1166100 1155700 1218500 986 1978 1051 3302;3303;3304 2364 2364 2829 1 GQTPLTEGSEDLDGHSDPEESFAR NGTFNLSRGQTPLTEG DPEESFARDLPDFPSI R G Q A R D 1 1 0 3 0 1 4 3 1 0 2 0 0 1 2 3 2 0 0 0 0 0 24 0 2573.1154 K7EQI9;Q86VR2 K7EQI9 208 231 FAM134C Protein FAM134C yes no 3 0.0078717 42.791 By MS/MS By matching By matching 1 1 1 3510700 1918300 1464400 127970 987 951 1052 3305;3306;3307 2365 2365 1256 1 GQVLFVVVDVAADNEHVLQYFGLK GEAAPRFRGQVLFVVV VLQYFGLKAEAAPTLR R G Q L K A 2 0 1 2 0 2 1 2 1 0 3 1 0 2 0 0 0 0 1 6 0 0 24 0 2659.401 Q13087 Q13087 306 329 PDIA2 Protein disulfide-isomerase A2 yes yes 3 0.0075144 40.319 By MS/MS By matching 1 1 11359000 0 5268300 6090600 988 1376 1053 3308;3309 2366 2366 1 GRAEGEWEDQEALDYFSDKESGK SKEKGSEKGRAEGEWE FSDKESGKQKFNDSEG K G R G K Q 2 1 0 3 0 1 5 3 0 0 1 2 0 1 0 2 0 1 1 0 0 0 23 2 2645.1518 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 369 391 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.004248 57.097 By MS/MS By matching By matching 1 1 1 7306400 4127800 1433300 1745400 989 596 1054 3310;3311;3312 2367 2367 792 1 GRASSHSSQTQGGGSVTK SPTSQRSRGRASSHSS QGGGSVTKKRKLESTE R G R T K K 1 1 0 0 0 2 0 4 1 0 0 1 0 0 0 5 2 0 0 1 0 0 18 1 1730.8296 A0A0C4DGC5;Q3BDU5;Q5TCI8;P02545 A0A0C4DGC5 26 43 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0047847 54.073 By MS/MS By MS/MS By MS/MS 1 1 1 2437900 384680 786940 1266300 990 195 1055 3313;3314;3315 2368;2369;2370 2370 268;269;270;271 3 GRDSPYQSR SRSRSGSRGRDSPYQS RDSPYQSRGSPHYFSP R G R S R G 0 2 0 1 0 1 0 1 0 0 0 0 0 0 1 2 0 0 1 0 0 0 9 1 1064.4999 Q13242 Q13242 201 209 SRSF9 Serine/arginine-rich splicing factor 9 yes yes 2 0.017281 68.786 By matching By MS/MS By matching 1 1 1 3887800 1074600 1579200 1234000 991 1383 1056 3316;3317;3318 2371 2371 1834 1 GRKDDDSDDESQSSHTGK KIKKVKKKGRKDDDSD SQSSHTGKKKPEISFM K G R G K K 0 1 0 5 0 1 1 2 1 0 0 2 0 0 0 4 1 0 0 0 0 0 18 2 1962.8151 O94874 O94874 452 469 UFL1 E3 UFM1-protein ligase 1 yes yes 3 0.0059778 65.298 By matching By MS/MS 1 1 829760 528370 301400 0 992 1054 1057 3319;3320 2372 2372 1416 1 GRLGSVDSFER SRGANRMRGRLGSVDS GSVDSFERSNSLASEK R G R E R S 0 2 0 1 0 0 1 2 0 0 1 0 0 1 0 2 0 0 0 1 0 0 11 1 1221.6102 O60343;Q5JU47 O60343 584 594 TBC1D4 TBC1 domain family member 4 yes no 2;3 0.0018265 78.486 By MS/MS By MS/MS By MS/MS 2 1 2 18484000 5805100 7080600 5598400 993 1021 1058 3321;3322;3323;3324;3325 2373;2374;2375 2373 1366 3 GRNSATSADEQPHIGNYR ________________ QPHIGNYRLLKTIGKG R G R Y R L 2 2 2 1 0 1 1 2 1 1 0 0 0 0 1 2 1 0 1 0 0 0 18 1 1971.9147 E7ETY4;E9PC69;Q7KZI7;F5H4J8;F5H6N2;F5H4F6 E7ETY4 4 21 MARK2 Serine/threonine-protein kinase MARK2 yes no 3 0.0038198 56.404 By MS/MS By MS/MS By MS/MS 1 2 1 12305000 4679100 4408700 3216800 994 546 1059 3326;3327;3328;3329 2376;2377;2378 2378 716;717 3 GRPSKTPSPSQPK QSTPQKGRGRPSKTPS TPSPSQPKKNVRVGRS R G R P K K 0 1 0 0 0 1 0 1 0 0 0 2 0 0 4 3 1 0 0 0 0 0 13 2 1365.7365 Q9NTI5 Q9NTI5 1376 1388 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes yes 2 4.1246E-05 88.73 By MS/MS By MS/MS By matching 1 1 1 6554300 2246700 2569700 1737900 995 1860 1060 3330;3331;3332 2379;2380 2380 2625;3516 2 GRTSSTNEDEDLNPEQKIER KDIKVSSRGRTSSTNE NPEQKIEREKERRMAN R G R E R E 0 2 2 2 0 1 4 1 0 1 1 1 0 0 1 2 2 0 0 0 0 0 20 2 2317.0782 B4DGI9;Q99081;B4DZP2;F5GY10 B4DGI9 575 594 TCF12 Transcription factor 12 yes no 3 0.015328 53.444 By MS/MS By matching 1 1 1147200 539550 607680 0 996 342 1061 3333;3334 2381 2381 471 1 GSDDAPYSPTAR KSRSKKRKGSDDAPYS APYSPTARVGPSVPRQ K G S A R V 2 1 0 2 0 0 0 1 0 0 0 0 0 0 2 2 1 0 1 0 0 0 12 0 1235.5418 E7ET14;A0A087WW48;O75151 E7ET14 111 122 PHF2 Lysine-specific demethylase PHF2 yes no 2 0.00037166 102.9 By matching By MS/MS By MS/MS 1 2 1 2862000 754420 1573200 534340 997 57 1062 3335;3336;3337;3338 2382;2383 2383 76 2 GSDFDCELR CLNYQHYKGSDFDCEL SDFDCELRLLIHQSLA K G S L R L 0 1 0 2 1 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 0 0 9 0 1097.4448 P61978;Q5T6W2 P61978 140 148 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0057817 91.069 By matching By MS/MS By MS/MS 1 1 1 3367400 1165000 1593600 608820 998 1306 1063 3339;3340;3341 2384;2385 2385 2 GSEDSPPKHAGNNESHSSR WHHRKGTKGSEDSPPK NNESHSSRRRNRHSKS K G S S R R 1 1 2 1 0 0 2 2 2 0 0 1 0 0 2 5 0 0 0 0 0 0 19 1 1991.8682 P48651 P48651 438 456 PTDSS1 Phosphatidylserine synthase 1 yes yes 3 0.0051264 54.103 By MS/MS By matching 1 1 4441800 0 2860300 1581500 999 1252 1064 3342;3343 2386 2386 1644 1 GSEKEEYFI QMESDLAKGSEKEEYF SEKEEYFI________ K G S F I - 0 0 0 0 0 0 3 1 0 1 0 1 0 1 0 1 0 0 1 0 0 0 9 1 1100.5026 S4R466;Q0VAQ4 S4R466 75 83 SMAGP Small cell adhesion glycoprotein yes no 2 0.0021289 107.9 By MS/MS By MS/MS By MS/MS 1 1 1 4082300 1526100 1054900 1501300 1000 1361 1065 3344;3345;3346 2387;2388;2389 2388 3830 3 GSESPNSFLDQESR KQPLPGPKGSESPNSF SFLDQESRRRRFTIAD K G S S R R 0 1 1 1 0 1 2 1 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1551.6801 Q5T4Y8;C9IZX4;Q6P9H4 Q5T4Y8 142 155 CNKSR3 Connector enhancer of kinase suppressor of ras 3 yes no 2 0.013498 49.482 By matching By matching By MS/MS 1 1 1 1194700 391460 398610 404660 1001 396 1066 3347;3348;3349 2390 2390 529 1 GSFSDTGLGDGK DKEKIKEKGSFSDTGL DTGLGDGKMKSDSFAP K G S G K M 0 0 0 2 0 0 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 12 0 1139.5095 Q9Y2W1 Q9Y2W1 376 387 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0018024 78.529 By MS/MS By MS/MS By MS/MS 1 1 1 12967000 4796300 4610200 3560700 1002 1960 1067 3350;3351;3352 2391;2392;2393 2391 2799 3 GSFSSENYWR LLPTHRRRGSFSSENY FSSENYWRKSYESSED R G S W R K 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 3 0 1 1 0 0 0 10 0 1231.5258 K7ER58;Q6P6C2 K7ER58 19 28 ALKBH5 RNA demethylase ALKBH5 yes no 2 0.0097188 62.546 By matching By MS/MS By MS/MS 1 1 1 1815700 663370 595380 556930 1003 953 1068 3353;3354;3355 2394;2395 2395 1258 2 GSGHSQEQPAPQPSGGDPSPPQER ESIGARSRGSGHSQEQ DPSPPQERNLPEGTER R G S E R N 1 1 0 1 0 4 2 4 1 0 0 0 0 0 6 4 0 0 0 0 0 0 24 0 2426.0847 Q8WXE0 Q8WXE0 707 730 CASKIN2 Caskin-2 yes yes 3 0.0047015 40.012 By MS/MS 1 284910 0 0 284910 1004 1688 1069 3356 2396 2396 2314 1 GSGTASDDEFENLR RIALPAPRGSGTASDD DDEFENLRIKGPNAVQ R G S L R I 1 1 1 2 0 0 2 2 0 0 1 0 0 1 0 2 1 0 0 0 0 0 14 0 1496.6379 Q7Z6Z7 Q7Z6Z7 1902 1915 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes yes 2 0.0082263 70.942 By matching By matching By MS/MS 1 1 1 102580000 37392000 32346000 32839000 1005 1587 1070 3357;3358;3359 2397 2397 3443 1 GSISTPNSPVK MRVSVSSKGSISTPNS STPNSPVKMTLIPSPN K G S V K M 0 0 1 0 0 0 0 1 0 1 0 1 0 0 2 3 1 0 0 1 0 0 11 0 1085.5717 A0A087WW06;Q96AY4 A0A087WW06 1974 1984 TTC28 Tetratricopeptide repeat protein 28 yes no 2 0.0072019 64.654 By MS/MS 1 433090 433090 0 0 1006 55 1071 3360 2398 2398 74;75 1 GSLASLDSLR APLAQHERGSLASLDS LASLDSLRKGGPPPPN R G S L R K 1 1 0 1 0 0 0 1 0 0 3 0 0 0 0 3 0 0 0 0 0 0 10 0 1017.5455 C9JZR2;O60716;E9PKY0 C9JZR2 345 354 CTNND1 Catenin delta-1 yes no 2 0.0037719 76.326 By matching By MS/MS By MS/MS 1 1 1 4538200 1898300 1332100 1307800 1007 459 1072 3361;3362;3363 2399;2400 2399 603 2 GSLSTDKDTAYGSFQNGHGIK GFTSPANRGSLSTDKD FQNGHGIKREDSRGSL R G S I K R 1 0 1 2 0 1 0 4 1 1 1 2 0 1 0 3 2 0 1 0 0 0 21 1 2182.0291 A0A0J9YW64;A6NIW2;Q5JSL3 A0A0J9YW64 1042 1062 DOCK11 Dedicator of cytokinesis protein 11 yes no 3 0.0021659 65.924 By MS/MS By matching By matching 1 1 1 3482200 1624200 1175800 682210 1008 237 1073 3364;3365;3366 2401 2401 3604 1 GSPDGSLQTGKPSAPK ALKLRSPRGSPDGSLQ TGKPSAPKKLKLDVGE R G S P K K 1 0 0 1 0 1 0 3 0 0 1 2 0 0 3 3 1 0 0 0 0 0 16 1 1525.7736 E7EV54;C9JFV4;Q8IZL8 E7EV54 333 348 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 2 1.1171E-18 120.99 By MS/MS By MS/MS By MS/MS 1 1 1 59631000 19787000 22692000 17152000 1009 433 1074 3367;3368;3369 2402;2403;2404 2403 570 3 GSPEEELPLPAFEK CHSLGTARGSPEEELP LPLPAFEKLNPYPTPS R G S E K L 1 0 0 0 0 0 4 1 0 0 2 1 0 1 3 1 0 0 0 0 0 0 14 0 1541.7613 Q5JTD0 Q5JTD0 299 312 TJAP1 Tight junction-associated protein 1 yes yes 2 0.010418 51.546 By matching By matching By MS/MS 1 1 1 1567500 500390 529960 537120 1010 1489 1075 3370;3371;3372 2405 2405 2003 1 GSPSSHLLGADHGLR GGAALGGRGSPSSHLL LGADHGLRKAKKPKKK R G S L R K 1 1 0 1 0 0 0 3 2 0 3 0 0 0 1 3 0 0 0 0 0 0 15 0 1502.759 F8VU11;Q6NWY9 F8VU11 784 798 PRPF40B Pre-mRNA-processing factor 40 homolog B yes no 3 0.0057321 49.149 By MS/MS By matching By matching 1 1 1 1621600 719740 427870 474030 1011 670 1076 3373;3374;3375 2406 2406 897 1 GSPTGGAQLLK GSHPQGPRGSPTGGAQ TGGAQLLKRKRKLGVV R G S L K R 1 0 0 0 0 1 0 3 0 0 2 1 0 0 1 1 1 0 0 0 0 0 11 0 1027.5662 Q14684 Q14684 512 522 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.0014197 101.35 By MS/MS By MS/MS By MS/MS 1 1 1 6312700 2363100 2284600 1665100 1012 1418 1077 3376;3377;3378 2407;2408;2409 2409 1889 3 GSSLSGTDDGAQEVVK NGDAPRERGSSLSGTD DGAQEVVKDILEDVVT R G S V K D 1 0 0 2 0 1 1 3 0 0 1 1 0 0 0 3 1 0 0 2 0 0 16 0 1548.7267 Q9Y6D5 Q9Y6D5 275 290 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.0042738 55.04 By matching By matching By MS/MS 1 1 1 2768300 644290 1109100 1014900 1013 1978 1078 3379;3380;3381 2410 2410 2830 1 GSSLTFLTQISK ELLNIQSRGSSLTFLT TFLTQISKHILDIIKQ R G S S K H 0 0 0 0 0 1 0 1 0 1 2 1 0 1 0 3 2 0 0 0 0 0 12 0 1280.6976 A0A0A0MT16;Q86UQ4 A0A0A0MT16 982 993 ABCA13 ATP-binding cassette sub-family A member 13 yes no 2 0.013999 50.806 By matching By matching By MS/MS 1 1 1 3028400 747280 1174200 1107000 1014 159 1079 3382;3383;3384 2411 2411 212;213 0 GSSPGIQDTLEAEDGAFETDEAPEDR EPDPKKIKGSSPGIQD TDEAPEDRILSCRKAG K G S D R I 3 1 0 4 0 1 5 3 0 1 1 0 0 1 2 2 2 0 0 0 0 0 26 0 2735.1682 Q9UNX4 Q9UNX4 239 264 WDR3 WD repeat-containing protein 3 yes yes 3 0.0022734 48.685 By matching By MS/MS By matching 1 1 1 2687500 908010 793000 986490 1015 1938 1080 3385;3386;3387 2412 2412 2737;2738 1 GSSPGPRPVEGTPASR KTKSQTHRGSSPGPRP VEGTPASRTQDPSSPG R G S S R T 1 2 0 0 0 0 1 3 0 0 0 0 0 0 4 3 1 0 0 1 0 0 16 1 1550.7801 Q13112 Q13112 408 423 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2;3 0.0037164 60.918 By MS/MS By MS/MS By matching 2 2 2 80418000 28802000 31686000 19930000 1016 1377 1081 3388;3389;3390;3391;3392;3393 2413;2414 2413 1816;1817 2 GSSPTPPCSPVQPSK TAEAIGLKGSSPTPPC CSPVQPSKQLEYLARI K G S S K Q 0 0 0 0 1 1 0 1 0 0 0 1 0 0 5 4 1 0 0 1 0 0 15 0 1524.7242 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3 H0YBY0 97 111 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 2 0.0050319 56.551 By MS/MS By MS/MS By matching 1 2 2 4979000 955550 2418400 1605100 1017 165 1082;1083 3394;3395;3396;3397;3398 2415;2416 2416 223;224;225 2 GSTAENAEYLR AKPNGIFKGSTAENAE AENAEYLRVAPQSSEF K G S L R V 2 1 1 0 0 0 2 1 0 0 1 0 0 0 0 1 1 0 1 0 0 0 11 0 1209.5626 E9PFD7;P00533 E9PFD7 1144 1154 EGFR Receptor protein-tyrosine kinase;Epidermal growth factor receptor yes no 2 0.0083655 62.303 By MS/MS 1 1242500 0 1242500 0 1018 574 1084 3399 2417 2417 3675 1 GSVSDEEMMELR ________________ DEEMMELREAFAKVDT R G S L R E 0 1 0 1 0 0 3 1 0 0 1 0 2 0 0 2 0 0 0 1 0 0 12 0 1381.5854 P13796;Q5TBN5;Q5TBN3 P13796 4 15 LCP1 Plastin-2 yes no 2 0.0012876 90.793 By MS/MS By MS/MS By MS/MS 2 3 3 7564200 1373800 3161800 3028600 1019 1156 1085;1086 3400;3401;3402;3403;3404;3405;3406;3407 2418;2419;2420;2421;2422;2423 2422 108 1503;1504 6 GSYGSDAEEEEYR SRPYQDTRGSYGSDAE DAEEEEYRQQLSEHSK R G S Y R Q 1 1 0 1 0 0 4 2 0 0 0 0 0 0 0 2 0 0 2 0 0 0 13 0 1490.5797 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1214 1226 TJP2 Tight junction protein ZO-2 yes no 2 0.0062801 62.68 By MS/MS By matching By MS/MS 1 1 1 2908800 951970 1221100 735730 1020 272 1087 3408;3409;3410 2424;2425 2424 362 2 GTDTQTPAVLSPSK LRQNAPPKGTDTQTPA PAVLSPSKTQATLKPK K G T S K T 1 0 0 1 0 1 0 1 0 0 1 1 0 0 2 2 3 0 0 1 0 0 14 0 1400.7147 P46087 P46087 722 735 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 2 0 225.31 By MS/MS By MS/MS By MS/MS 1 1 1 19257000 6293600 7037900 5925300 1021 1242 1088 3411;3412;3413 2426;2427;2428 2428 1614 3 GTDTQTPAVLSPSKTQATLKPK LRQNAPPKGTDTQTPA TQATLKPKDHHQPLGR K G T P K D 2 0 0 1 0 2 0 1 0 0 2 3 0 0 3 2 5 0 0 1 0 0 22 2 2268.2325 P46087 P46087 722 743 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes yes 3 2.101E-32 108.96 By MS/MS By matching By matching 1 1 1 12884000 5821100 4306100 2756800 1022 1242 1089 3414;3415;3416 2429 2429 1614 1 GTGQSDDSDIWDDTALIK EDSVLFRRGTGQSDDS WDDTALIKAYDKAVAS R G T I K A 1 0 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 18 0 1935.8698 B4DP61;E7EQZ4;Q16637 B4DP61 24 41 SMN2;SMN1 Survival motor neuron protein yes no 2 0.0027833 60.157 By matching By matching By MS/MS 1 1 1 15104000 5945800 4368200 4790000 1023 346 1090 3417;3418;3419 2430 2430 474;475 1 GTHVDLGLASANVDFAFSLYK LTQENQDRGTHVDLGL DFAFSLYKQLVLKAPD R G T Y K Q 3 0 1 2 0 0 0 2 1 0 3 1 0 2 0 2 1 0 1 2 0 0 21 0 2224.1164 G3V595;P01011 G3V595 42 62 SERPINA3 Alpha-1-antichymotrypsin;Alpha-1-antichymotrypsin His-Pro-less yes no 3 0.0015444 51.876 By MS/MS By MS/MS 1 1 4256400 0 2313800 1942600 1024 725 1091 3420;3421 2431;2432 2431 2 GTIEILSDVQLIK GITTKISRGTIEILSD LSDVQLIKTGDKV___ R G T I K T 0 0 0 1 0 1 1 1 0 3 2 1 0 0 0 1 1 0 0 1 0 0 13 0 1427.8235 F8VPE8;F8VW21;F8VU65;Q8NHW5;P05388 F8VPE8 136 148 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 yes no 2 2.9141E-09 110.53 By MS/MS By MS/MS 1 1 1841400 917740 923620 0 1025 665 1092 3422;3423 2433;2434 2434 2 GTIQVITQGTSLK RAWAGSPKGTIQVITQ ITQGTSLKNAGNCLSP K G T L K N 0 0 0 0 0 2 0 2 0 2 1 1 0 0 0 1 3 0 0 1 0 0 13 0 1344.7613 Q5SZU1;O43175 Q5SZU1 318 330 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.0030767 77.288 By matching By MS/MS 1 1 1018900 320490 698380 0 1026 1002 1093 3424;3425 2435 2435 1 GTPSQSPVVGR APTLHLNKGTPSQSPV SQSPVVGRSQGQQQEK K G T G R S 0 1 0 0 0 1 0 2 0 0 0 0 0 0 2 2 1 0 0 2 0 0 11 0 1083.5673 C9J2I0;B8ZZY2;P52594 C9J2I0 98 108 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 2 0.002167 84.352 By MS/MS By MS/MS 2 1 1382900 0 191800 1191100 1027 388 1094 3426;3427;3428 2436;2437;2438 2438 509 3 GTSPSSSSRPQR FTQFKRLKGTSPSSSS SSSSRPQRVIEDRDSG K G T Q R V 0 2 0 0 0 1 0 1 0 0 0 0 0 0 2 5 1 0 0 0 0 0 12 1 1245.6062 H3BVG0;Q8N1F7 H3BVG0 765 776 NUP93 Nuclear pore complex protein Nup93 yes no 2 0.011634 64.945 By matching By MS/MS By matching 1 1 1 22198000 9178500 12877000 142880 1028 851 1095 3429;3430;3431 2439 2439 1148 1 GTTITLVLKEEASDYLELDTIK PRGNTLGRGTTITLVL YLELDTIKNLVKKYSQ R G T I K N 1 0 0 2 0 0 3 1 0 2 4 2 0 0 0 1 4 0 1 1 0 0 22 1 2451.2996 P14625;Q96GW1 P14625 244 265 HSP90B1 Endoplasmin yes no 3 0.013259 40.158 By matching By MS/MS 1 1 3895500 0 2540200 1355300 1029 1159 1096 3432;3433 2440 2440 1 GTYGILSK SYSSASTRGTYGILSK GTYGILSKTVGTQDTP R G T S K T 0 0 0 0 0 0 0 2 0 1 1 1 0 0 0 1 1 0 1 0 0 0 8 0 837.45962 Q08378 Q08378 327 334 GOLGA3 Golgin subfamily A member 3 yes yes 2 0.012112 95.909 By MS/MS By MS/MS By MS/MS 1 1 1 1832400 677740 689490 465170 1030 1354 1097 3434;3435;3436 2441;2442;2443;2444 2444 3828 4 GVDEVTIVNILTNR IETAIKTKGVDEVTIV IVNILTNRSNAQRQDI K G V N R S 0 1 2 1 0 0 1 1 0 2 1 0 0 0 0 0 2 0 0 3 0 0 14 0 1541.8413 H0YMD0;H0YMU9;H0YN42;P07355;H0YMM1;H0YKS4;H0YMD9;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4 H0YMD0 50 63 ANXA2 Annexin;Annexin A2 yes no 2;3 2.0276E-74 169.89 By MS/MS By MS/MS By MS/MS 1 2 2 14675000 4675100 5185900 4814500 1031 806 1098 3437;3438;3439;3440;3441 2445;2446;2447;2448;2449 2445 5 GVEEEEEDGEMRE CNNVLYIRGVEEEEED EEDGEMRE________ R G V R E - 0 1 0 1 0 0 7 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 13 1 1536.5886 P62306 P62306 74 86 SNRPF Small nuclear ribonucleoprotein F yes yes 2 3.0306E-05 100.88 By MS/MS By MS/MS By MS/MS 2 1 1 3668500 1401000 1378000 889480 1032 1312 1099;1100 3442;3443;3444;3445 2450;2451;2452;2453 2452 132 4 GVLDLDRPGEPAGEESPGPLQER RMKTPTVRGVLDLDRP SPGPLQERSPLLPLPE R G V E R S 1 2 0 2 0 1 4 4 0 0 3 0 0 0 4 1 0 0 0 1 0 0 23 1 2417.1823 Q9UMN6 Q9UMN6 2333 2355 KMT2B Histone-lysine N-methyltransferase 2B yes yes 3 0.0042558 49.592 By matching By MS/MS 1 1 1555700 835400 0 720270 1033 1934 1101 3446;3447 2454 2454 2732 1 GVLHTFSPSPK RGSATTPRGVLHTFSP HTFSPSPKLQNSASAT R G V P K L 0 0 0 0 0 0 0 1 1 0 1 1 0 1 2 2 1 0 0 1 0 0 11 0 1168.6241 Q86YP4 Q86YP4 540 550 GATAD2A Transcriptional repressor p66-alpha yes yes 2 0.0025995 74.962 By MS/MS By MS/MS By matching 1 1 1 1576000 570750 510560 494710 1034 1603 1102 3448;3449;3450 2455;2456 2456 2189;2190 2 GVNTFSPEGR LTRSEYDRGVNTFSPE NTFSPEGRLFQVEYAI R G V G R L 0 1 1 0 0 0 1 2 0 0 0 0 0 1 1 1 1 0 0 1 0 0 10 0 1062.5094 P28066 P28066 11 20 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.0047013 69.864 By matching By MS/MS By matching 1 1 1 2478600 756020 991950 730610 1035 1199 1103 3451;3452;3453 2457 2457 1549 1 GVPAGNSDTEGGQPGR ISVVSATKGVPAGNSD TEGGQPGRKRRWGAST K G V G R K 1 1 1 1 0 1 1 5 0 0 0 0 0 0 2 1 1 0 0 1 0 0 16 0 1497.6808 S4R3H4;E7EQT4;Q9UKV3;G3V3B0;G3V3T3 S4R3H4 774 789 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.00097232 75.463 By MS/MS By MS/MS By MS/MS 1 1 1 5653700 1800500 2105300 1748000 1036 532 1104 3454;3455;3456 2458;2459;2460 2459 685 3 GVPQIEVTFDIDANGIVHVSAK IGIPPAPRGVPQIEVT GIVHVSAKDKGTGREQ R G V A K D 2 0 1 2 0 1 1 2 1 3 0 1 0 1 1 1 1 0 0 4 0 0 22 0 2308.2063 P38646;H0Y8S0 P38646 514 535 HSPA9 Stress-70 protein, mitochondrial yes no 3 0.0080371 40.642 By matching By MS/MS 1 1 4926200 3345300 1580900 0 1037 1228 1105 3457;3458 2461 2461 1 GVPQIEVTFEIDVNGILR TGIPPAPRGVPQIEVT IDVNGILRVTAEDKGT R G V L R V 0 1 1 1 0 1 2 2 0 3 1 0 0 1 1 0 1 0 0 3 0 0 18 0 1998.0786 P11021 P11021 493 510 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.00090719 77.185 By MS/MS By MS/MS 1 1 6687700 0 2768100 3919600 1038 1141 1106 3459;3460 2462;2463 2463 2 GVQYLNEIK NILTDITKGVQYLNEI VQYLNEIKDSVVAGFQ K G V I K D 0 0 1 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 1 1 0 0 9 0 1062.571 P13639 P13639 668 676 EEF2 Elongation factor 2 yes yes 2 0.013104 75.213 By matching By MS/MS 1 1 916720 316600 600110 0 1039 1154 1107 3461;3462 2464 2464 1 GVTIKPTVDDD IGWGQIRRGVTIKPTV IKPTVDDD________ R G V D D - 0 0 0 3 0 0 0 1 0 1 0 1 0 0 1 0 2 0 0 2 0 0 11 1 1158.5768 Q2VIR3;P41091 Q2VIR3 462 472 EIF2S3L;EIF2S3 Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 yes no 2 0.0079501 74.165 By MS/MS 1 477620 477620 0 0 1040 1233 1108 3463 2465 2465 1 GVTVQSQGPGGK ________________ QSQGPGGKVVTCAHRY M G V G K V 0 0 0 0 0 2 0 4 0 0 0 1 0 0 1 1 1 0 0 2 0 0 12 0 1113.5778 C9JXX7 C9JXX7 2 13 ITGA6 yes yes 2 0.0057514 65.305 By MS/MS 1 0 0 0 0 1041 456 1109 3464 2466 2466 3028 1 GVVDSDDLPLNVSR PKYLNFVKGVVDSDDL DLPLNVSRETLQQHKL K G V S R E 0 1 1 3 0 0 0 1 0 0 2 0 0 0 1 2 0 0 0 3 0 0 14 0 1484.7471 P14625 P14625 435 448 HSP90B1 Endoplasmin yes yes 2 0.00021555 81.525 By MS/MS By matching By matching 1 1 1 2730800 1047700 1112000 571130 1042 1159 1110 3465;3466;3467 2467 2467 1 GVVDSEDLPLNISR PEYLNFIRGVVDSEDL DLPLNISREMLQQSKI R G V S R E 0 1 1 2 0 0 1 1 0 1 2 0 0 0 1 2 0 0 0 2 0 0 14 0 1512.7784 P08238;P07900 P08238 379 392 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha no no 2 1.6711E-21 142.08 By MS/MS By MS/MS By MS/MS 1 1 1 6539500 1879700 3610600 1049200 1043 1126;1122 1111 3468;3469;3470 2468;2469;2470 2469 3 GVVSRLFPYSNYK SFPGDRLRGVVSRLFP LFPYSNYKLEMVVVNG R G V Y K L 0 1 1 0 0 0 0 1 0 0 1 1 0 1 1 2 0 0 2 2 0 0 13 1 1528.8038 X6RKN2;O94856 X6RKN2 880 892 NFASC Neurofascin yes no 3 0.016589 40.962 By MS/MS 1 536600 0 536600 0 1044 1053 1112 3471 2471 2471 1414;1415 0 GWGDQLIWTQTYEEALYK KLPQTLSRGWGDQLIW TYEEALYKSKTSNKPL R G W Y K S 1 0 0 1 0 2 2 2 0 1 2 1 0 0 0 0 2 2 2 0 0 0 18 0 2200.0477 C9J3E2;B5MC07;O95994 C9J3E2 47 64 AGR2 Anterior gradient protein 2 homolog yes no 2 5.4802E-47 145.81 By matching By matching By MS/MS 1 1 1 30924000 17270000 7935200 5719600 1045 360 1113 3472;3473;3474 2472 2472 1 GYAFIEFASFEDAK QNQNGKSKGYAFIEFA FASFEDAKEALNSCNK K G Y A K E 3 0 0 1 0 0 2 1 0 1 0 1 0 3 0 1 0 0 1 0 0 0 14 0 1593.7351 P19338;H7BY16 P19338 524 537 NCL Nucleolin yes no 2 4.0225E-05 97.734 By MS/MS By MS/MS By matching 1 1 1 6422600 3557600 0 2865000 1046 1175 1114 3475;3476;3477 2473;2474 2473 2 GYAWGLNELK KHAWNNYKGYAWGLNE AWGLNELKPISKGGHS K G Y L K P 1 0 1 0 0 0 1 2 0 0 2 1 0 0 0 0 0 1 1 0 0 0 10 0 1149.5819 P33908 P33908 212 221 MAN1A1 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA yes yes 2 0.018468 52.716 By MS/MS 1 0 0 0 0 1047 1216 1115 3478 2475 2475 3779 1 GYDVIAQAQSGTGK RAIIPCIKGYDVIAQA QAQSGTGKTATFAISI K G Y G K T 2 0 0 1 0 2 0 3 0 1 0 1 0 0 0 1 1 0 1 1 0 0 14 0 1393.6838 E7EQG2;P60842;Q14240;J3KT04;J3KS93;E7EMV8;J3KSN7;J3QKZ9;J3QLN6;J3KS25;J3QR64;J3KTB5;J3QL43;J3QS69;J3KT12 E7EQG2 70 83 EIF4A2;EIF4A1 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 2 3.9226E-12 114.71 By MS/MS By MS/MS By matching 1 1 1 1995500 501060 1170300 324080 1048 529 1116 3479;3480;3481 2476;2477 2477 2 GYEEWLLNEIR GCLEQVEKGYEEWLLN EWLLNEIRRLERLDHL K G Y I R R 0 1 1 0 0 0 3 1 0 1 2 0 0 0 0 0 0 1 1 0 0 0 11 0 1420.6987 P12814;H9KV75;P35609;O43707;F6THM6 P12814 377 387 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 yes no 2 0.00043923 82.749 By MS/MS By MS/MS 1 1 1301400 0 489140 812300 1049 1152 1117 3482;3483 2478;2479 2478 1 GYMMMFPR RSPFEDSRGYMMMFPR GYMMMFPRVSPPPAPS R G Y P R V 0 1 0 0 0 0 0 1 0 0 0 0 3 1 1 0 0 0 1 0 0 0 8 0 1031.4391 O14654 O14654 742 749 IRS4 Insulin receptor substrate 4 yes yes 2 0.010687 52.683 By MS/MS 1 257050 257050 0 0 1050 982 1118 3484 2480 2480 3740 1 GYNDDYYEESYFTTR DALLYQSKGYNDDYYE EESYFTTRTYGEPESA K G Y T R T 0 1 1 2 0 0 2 1 0 0 0 0 0 1 0 1 2 0 4 0 0 0 15 0 1921.7643 Q5HY57;P50402 Q5HY57 54 68 EMD Emerin yes no 2 0.0024717 67.022 By matching By matching By MS/MS 1 2 2 4409500 1438700 1669600 1301200 1051 1268 1119 3485;3486;3487;3488;3489 2481;2482 2482 3808;3809 2 GYPDSESTWEPR EYYLVKWRGYPDSEST SESTWEPRQNLKCVRI R G Y P R Q 0 1 0 1 0 0 2 1 0 0 0 0 0 0 2 2 1 1 1 0 0 0 12 0 1422.6052 O43463 O43463 66 77 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 yes yes 2 0.013788 50.909 By MS/MS By matching 1 1 700760 462010 0 238750 1052 1010 1120 3490;3491 2483 2483 1343;1344;3243 0 GYSDEIYVVPDDSQNR IDTIFKQKGYSDEIYV VPDDSQNRIKIRNSFV K G Y N R I 0 1 1 3 0 1 1 1 0 1 0 0 0 0 1 2 0 0 2 2 0 0 16 0 1855.8224 A0A0A0MSK6;Q13017 A0A0A0MSK6 1103 1118 ARHGAP5 Rho GTPase-activating protein 5 yes no 2 5.1399E-09 103.21 By MS/MS By MS/MS By MS/MS 1 1 1 15211000 5937700 5279500 3993700 1053 153 1121 3492;3493;3494 2484;2485;2486 2485 3589 3 GYSFTTTAER LMKILTERGYSFTTTA SFTTTAEREIVRDIKE R G Y E R E 1 1 0 0 0 0 1 1 0 0 0 0 0 1 0 1 3 0 1 0 0 0 10 0 1131.5197 P63261;P60709;I3L3I0;I3L1U9;I3L4N8 P63261 197 206 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 2 0.0035641 99.442 By MS/MS By matching By matching 1 1 1 9318700 4035500 3862600 1420600 1054 1305 1122 3495;3496;3497 2487 2487 1 GYTSDSEVYTDHGRPGK QNDVSLDRGYTSDSEV TDHGRPGKIHRSATDA R G Y G K I 0 1 0 2 0 0 1 3 1 0 0 1 0 0 1 2 2 0 2 1 0 0 17 1 1867.8337 Q92538 Q92538 1315 1331 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes yes 3 0.0021932 58.814 By matching By MS/MS By MS/MS 1 1 1 25833000 9342200 10194000 6297700 1055 1694 1123 3498;3499;3500 2488;2489 2488 2324 2 GYVLGETSNLPSPGK LVIPFSGKGYVLGETS SNLPSPGKLITSHAIN K G Y G K L 0 0 1 0 0 0 1 3 0 0 2 1 0 0 2 2 1 0 1 1 0 0 15 0 1517.7726 B1AKT1;Q9H040 B1AKT1 153 167 SPRTN SprT-like domain-containing protein Spartan yes no 2 0.0047994 56.548 By matching By MS/MS 1 1 620510 0 300170 320330 1056 327 1124 3501;3502 2490 2490 454 1 GYYSPGIVSTR HTNYLLMRGYYSPGIV SPGIVSTRNLNPNDSI R G Y T R N 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 2 1 0 2 1 0 0 11 0 1198.5982 Q12789 Q12789 1650 1660 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 2 0.01367 55.04 By MS/MS By MS/MS By matching 1 1 1 1833700 497250 600790 735670 1057 1363 1125 3503;3504;3505 2491;2492 2491 1791 2 HALTSPSLGGQGR ________________ PSLGGQGRQNLWFANP R H A G R Q 1 1 0 0 0 1 0 3 1 0 2 0 0 0 1 2 1 0 0 0 0 0 13 0 1279.6633 M0QX45;M0QZ22;Q5PRF9 M0QX45 5 17 SAMD4B Protein Smaug homolog 2 yes no 2 0.00048138 87.216 By MS/MS By MS/MS By MS/MS 1 1 1 5554000 1942000 1871000 1741000 1058 956 1126 3506;3507;3508 2493;2494;2495 2493 1260;3226 3 HAPHCLSEEEGEQDRPR PRPASLLRHAPHCLSE EGEQDRPRAPGPWDPL R H A P R A 1 2 0 1 1 1 4 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 17 1 2045.8973 E9PH18;A0A0J9YX62;O75190 E9PH18 156 172 DNAJB6 DnaJ homolog subfamily B member 6 yes no 3 0.0014245 63.682 By MS/MS By matching By matching 1 1 1 5334100 2394500 1876200 1063400 1059 241 1127 3509;3510;3511 2496 2496 324 1 HASAPSHVQPSDSEK QKSQPRRRHASAPSHV VQPSDSEKNRTMLFQV R H A E K N 2 0 0 1 0 1 1 0 2 0 0 1 0 0 2 4 0 0 0 1 0 0 15 0 1575.7277 O60343 O60343 339 353 TBC1D4 TBC1 domain family member 4 yes yes 2;3 2.4594E-07 92.151 By MS/MS By MS/MS By MS/MS 2 2 2 21295000 7322400 10344000 3628800 1060 1021 1128 3512;3513;3514;3515;3516;3517 2497;2498;2499;2500;2501;2502 2497 1367;1368 6 HASAPSHVQPSDSEKNR QKSQPRRRHASAPSHV PSDSEKNRTMLFQVGR R H A N R T 2 1 1 1 0 1 1 0 2 0 0 1 0 0 2 4 0 0 0 1 0 0 17 1 1845.8718 O60343 O60343 339 355 TBC1D4 TBC1 domain family member 4 yes yes 3;4 0.00024619 76.341 By MS/MS By MS/MS By MS/MS 1 2 2 18506000 3220000 7216000 8069600 1061 1021 1129 3518;3519;3520;3521;3522 2503;2504;2505;2506;2507;2508 2505 1367;1368 6 HASPDKWNDKPK VYYHITSKHASPDKWN DKWNDKPKNQLNKETD K H A P K N 1 0 1 2 0 0 0 0 1 0 0 3 0 0 2 1 0 1 0 0 0 0 12 2 1421.7052 Q96JM3;S4R3K0 Q96JM3 85 96 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes no 4 0.011697 51.286 By matching By MS/MS 1 1 836080 0 379100 456970 1062 1743 1130 3523;3524 2509 2509 2398 1 HAYKDDSPR KERRPHKKHAYKDDSP AYKDDSPRRRSTSPDH K H A P R R 1 1 0 2 0 0 0 0 1 0 0 1 0 0 1 1 0 0 1 0 0 0 9 1 1087.5047 Q02040 Q02040 627 635 AKAP17A A-kinase anchor protein 17A yes yes 2 0.012766 73.885 By matching By MS/MS By MS/MS 1 1 1 2687400 529140 1111800 1046500 1063 1333 1131 3525;3526;3527 2510;2511 2511 1741 2 HDSIPAADTFEDLSDVEGGGSEPTQR EDLRRSVKHDSIPAAD GGSEPTQRDAGSRDEK K H D Q R D 2 1 0 4 0 1 3 3 1 1 1 0 0 1 2 3 2 0 0 1 0 0 26 0 2729.2053 O95671 O95671 226 251 ASMTL N-acetylserotonin O-methyltransferase-like protein yes yes 3 0.0009257 51.234 By matching By matching By MS/MS 1 1 1 7257800 3188600 1457400 2611800 1064 1071 1132 3528;3529;3530 2512 2512 1439 1 HDSPEDVKR CMMAQYNRHDSPEDVK DSPEDVKRRAMADPEV R H D K R R 0 1 0 2 0 0 1 0 1 0 0 1 0 0 1 1 0 0 0 1 0 0 9 1 1081.5152 H0YGI8;P31948 H0YGI8 78 86 STIP1 Stress-induced-phosphoprotein 1 yes no 3 0.010398 73.435 By MS/MS By matching By matching 1 1 1 4549100 1676200 1643500 1229500 1065 795 1133 3531;3532;3533 2513 2513 1083 1 HDTPDPSPLR DPSPRRARHDTPDPSP TPDPSPLRGARHDSDT R H D L R G 0 1 0 2 0 0 0 0 1 0 1 0 0 0 3 1 1 0 0 0 0 0 10 0 1133.5465 Q9BRD0 Q9BRD0 157 166 BUD13 BUD13 homolog yes yes 2 0.010908 77.279 By matching By MS/MS By matching 1 1 1 4338600 1253400 1874700 1210500 1066 1776 1134 3534;3535;3536 2514 2514 2462;3486 1 HELSPPQKR RERFSPPRHELSPPQK ELSPPQKRMRRDWDEH R H E K R M 0 1 0 0 0 1 1 0 1 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1090.5883 Q9BXP5;C9JUL9 Q9BXP5 71 79 SRRT Serrate RNA effector molecule homolog yes no 2;3 0.0029802 99.568 By MS/MS By MS/MS By MS/MS 2 2 2 13156000 3474800 6064200 3616800 1067 1795 1135 3537;3538;3539;3540;3541;3542 2515;2516;2517;2518;2519;2520 2516 2492 6 HFEASCGQLSPAR NKATKILRHFEASCGQ CGQLSPARGTSAEPGP R H F A R G 2 1 0 0 1 1 1 1 1 0 1 0 0 1 1 2 0 0 0 0 0 0 13 0 1458.6674 A0A1B0GV70;Q96N21 A0A1B0GV70 415 427 ENTHD2 AP-4 complex accessory subunit tepsin yes no 2 0.016876 49.418 By MS/MS By matching 1 1 1567300 0 801920 765420 1068 282 1136 3543;3544 2521 2521 374 1 HFLENLVTAFDVGSEK RFNFRLVRHFLENLVT AFDVGSEKTRIGLAQY R H F E K T 1 0 1 1 0 0 2 1 1 0 2 1 0 2 0 1 1 0 0 2 0 0 16 0 1804.8996 Q05707;H0YBB2;Q4G0W3 Q05707 179 194 COL14A1 Collagen alpha-1(XIV) chain yes no 3 0.00034104 73.593 By MS/MS By matching 1 1 1752500 1094700 657810 0 1069 1346 1137 3545;3546 2522 2522 1 HFNYPSTPPSER DMNQGTSRHFNYPSTP PSTPPSERNGTSSTCQ R H F E R N 0 1 1 0 0 0 1 0 1 0 0 0 0 1 3 2 1 0 1 0 0 0 12 0 1430.6579 Q9BX63;J3QSE8 Q9BX63 107 118 BRIP1 Fanconi anemia group J protein yes no 2 0.009356 57.802 By matching By MS/MS By MS/MS 1 1 1 1850300 712060 691030 447200 1070 1791 1138 3547;3548;3549 2523;2524 2523 2486;3493 2 HGAPAAPSPPPR PLVAPPRRHGAPAAPS AAPSPPPRGSRAGPVV R H G P R G 3 1 0 0 0 0 0 1 1 0 0 0 0 0 5 1 0 0 0 0 0 0 12 0 1153.5992 Q4KMP7 Q4KMP7 15 26 TBC1D10B TBC1 domain family member 10B yes yes 2;3 0.0025037 74.537 By MS/MS By MS/MS By MS/MS 2 2 2 1988900 249700 1319200 420030 1071 1473 1139 3550;3551;3552;3553;3554;3555 2525;2526;2527 2526 1972 3 HGESAWNLENR AYKLVLIRHGESAWNL SAWNLENRFSGWYDAD R H G N R F 1 1 2 0 0 0 2 1 1 0 1 0 0 0 0 1 0 1 0 0 0 0 11 0 1311.5956 P18669 P18669 11 21 PGAM1 Phosphoglycerate mutase 1 yes yes 2 4.9022E-23 151.3 By MS/MS By MS/MS By MS/MS 1 1 1 18659000 7196100 6249100 5213400 1072 1172 1140 3556;3557;3558 2528;2529;2530 2530 1524 3 HGLAHDEMKSPR ISPSTFRKHGLAHDEM HDEMKSPREPGYKAEG K H G P R E 1 1 0 1 0 0 1 1 2 0 1 1 1 0 1 1 0 0 0 0 0 0 12 1 1376.6619 Q9Y2W1 Q9Y2W1 689 700 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 1.2492E-14 139.21 By MS/MS By MS/MS By MS/MS 1 2 1 5506200 1776600 2197600 1532000 1073 1960 1141 3559;3560;3561;3562 2531;2532;2533;2534 2532 2800 4 HGLLLPASPVR NSTTFPSRHGLLLPAS LLPASPVRMHSSRLHQ R H G V R M 1 1 0 0 0 0 0 1 1 0 3 0 0 0 2 1 0 0 0 1 0 0 11 0 1158.6873 Q96E09 Q96E09 69 79 FAM122A Protein FAM122A yes yes 2 9.3186E-06 113.24 By MS/MS By MS/MS By MS/MS 1 1 1 11511000 4546600 4191300 2772600 1074 1730 1142 3563;3564;3565 2535;2536;2537 2536 2374 3 HGLQLGAQSPGR LEKHVQVRHGLQLGAQ LGAQSPGRGTTLARGS R H G G R G 1 1 0 0 0 2 0 3 1 0 2 0 0 0 1 1 0 0 0 0 0 0 12 0 1219.6422 Q8N1G0;A6PVV7 Q8N1G0 1049 1060 ZNF687 Zinc finger protein 687 yes no 2;3 0.00034756 92.151 By matching By MS/MS By MS/MS 2 2 2 12979000 4295500 5143600 3539400 1075 1624 1143 3566;3567;3568;3569;3570;3571 2538;2539;2540 2539 2225 3 HGSFHEDEDPIGSPR TGGSPSVRHGSFHEDE EDPIGSPRLLSVKGSP R H G P R L 0 1 0 2 0 0 2 2 2 1 0 0 0 1 2 2 0 0 0 0 0 0 15 0 1678.7336 Q96T58 Q96T58 1266 1280 SPEN Msx2-interacting protein yes yes 3 0.00046995 72.187 By MS/MS By MS/MS By MS/MS 1 1 1 5758600 2007800 1930700 1820000 1076 1763 1144 3572;3573;3574 2541;2542;2543 2541 2443 3 HGSFVNKPTR LGGEEWTRHGSFVNKP SFVNKPTRGWLHPNDK R H G T R G 0 1 1 0 0 0 0 1 1 0 0 1 0 1 1 1 1 0 0 1 0 0 10 1 1141.5992 P29353;Q5T181;Q5T182 P29353 137 146 SHC1 SHC-transforming protein 1 yes no 3 0.0081754 62.528 By MS/MS By matching By matching 1 1 1 3045000 937050 1338000 769900 1077 1204 1145 3575;3576;3577 2544 2544 1554 1 HGSVSADEAAR ________________ VSADEAARTAPFHLDL R H G A R T 3 1 0 1 0 0 1 1 1 0 0 0 0 0 0 2 0 0 0 1 0 0 11 0 1098.5054 A0A1B0GU90;A0A1B0GW73;H3BNF1;A0A1B0GTV3;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;Q9NWW5 A0A1B0GU90 5 15 CLN6 Ceroid-lipofuscinosis neuronal protein 6 yes no 2 9.8467E-05 112.43 By MS/MS By MS/MS By matching 1 1 1 5093300 1909300 1623700 1560300 1078 246 1146 3578;3579;3580 2545;2546 2545 330 1 HHNSTAELQK SYSGDISRHHNSTAEL NSTAELQKAEAKKEET R H H Q K A 1 0 1 0 0 1 1 0 2 0 1 1 0 0 0 1 1 0 0 0 0 0 10 0 1163.5683 A0A0A0MS99;I3L4X2;P33527 A0A0A0MS99 611 620 ABCC1 Multidrug resistance-associated protein 1 yes no 3 0.0078386 56.122 By matching By matching By MS/MS 1 1 1 1614500 537050 695670 381800 1079 147 1147 3581;3582;3583 2547 2547 197;2920 1 HHPEHFSGR TITGYRIRHHPEHFSG HPEHFSGRPREDRVPH R H H G R P 0 1 0 0 0 0 1 1 3 0 0 0 0 1 1 1 0 0 0 0 0 0 9 0 1102.5057 P02751;H0Y7Z1 P02751 1392 1400 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 0.018566 40.058 By MS/MS By matching 1 1 195950 115410 80536 0 1080 1095 1148 3584;3585 2548 2548 1 HHQSLSRPEGPSK H H S K 0 1 0 0 0 1 1 1 2 0 1 1 0 0 2 3 0 0 0 0 0 0 13 1 1458.7328 REV__A2A3C1 yes no 2 0.015131 57.434 By MS/MS By matching 2 1 971810 628940 0 342880 + 1081 1986 1149 3586;3587;3588 2549 2549 2840 1 HIDRNYEPLK AFKPTSNRHIDRNYEP DRNYEPLKTQPKKYAK R H I L K T 0 1 1 1 0 0 1 0 1 1 1 1 0 0 1 0 0 0 1 0 0 0 10 1 1283.6622 Q12929 Q12929 520 529 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 3 0.011568 59.153 By MS/MS By matching By matching 1 1 1 1267500 462870 448690 355930 1082 1370 1150 3589;3590;3591 2550;2551 2551 3832 2 HIISATSLSTSPTELGSR SWREGGGRHIISATSL SPTELGSRNSSTGDGA R H I S R N 1 1 0 0 0 0 1 1 1 2 2 0 0 0 1 5 3 0 0 0 0 0 18 0 1855.964 Q5JSZ5 Q5JSZ5 216 233 PRRC2B Protein PRRC2B yes yes 2 1.1042E-09 90.697 By matching By matching By MS/MS 1 1 1 4632400 1720500 1266400 1645600 1083 1488 1151 3592;3593;3594 2552 2552 2000 1 HIKEEPLSEEEPCTSTAIASPEK KKKRGKKKHIKEEPLS TAIASPEKKKKKKKKR K H I E K K 2 0 0 0 1 0 6 0 1 2 1 2 0 0 3 3 2 0 0 0 0 0 23 1 2581.2218 Q9Y2X3 Q9Y2X3 495 517 NOP58 Nucleolar protein 58 yes yes 3 0.0011972 57.768 By MS/MS By MS/MS By matching 1 1 1 21489000 7426300 8234300 5828200 1084 1961 1152 3595;3596;3597 2553;2554 2554 2804;2805;3555 2 HIKEEPLSEEEPCTSTAIASPEKK KKKRGKKKHIKEEPLS AIASPEKKKKKKKKRE K H I K K K 2 0 0 0 1 0 6 0 1 2 1 3 0 0 3 3 2 0 0 0 0 0 24 2 2709.3167 Q9Y2X3 Q9Y2X3 495 518 NOP58 Nucleolar protein 58 yes yes 3;4 0.00039611 57.02 By MS/MS By matching By MS/MS 2 1 2 69210000 35521000 5525600 28164000 1085 1961 1153;1154 3598;3599;3600;3601;3602 2555;2556;2557 2555 2804;2805;3555 3 HIVSNDSSDSDDESHEPK ELENITTKHIVSNDSS DDESHEPKGTENEDAG K H I P K G 0 0 1 4 0 0 2 0 2 1 0 1 0 0 1 5 0 0 0 1 0 0 18 0 1996.8246 P47712 P47712 428 445 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase yes yes 3 0.0080954 44.788 By matching By MS/MS 1 1 2077100 1184200 0 892940 1086 1247 1155 3603;3604 2558 2558 1633 1 HKAAAYDISEDEED CSPANLSRHKAAAYDI DISEDEED________ R H K E D - 3 0 0 3 0 0 3 0 1 1 0 1 0 0 0 1 0 0 1 0 0 0 14 1 1591.6638 P49585 P49585 354 367 PCYT1A Choline-phosphate cytidylyltransferase A yes yes 2 0.013846 54.898 By MS/MS By matching By matching 1 1 1 18457000 6299700 6049600 6107600 1087 1257 1156 3605;3606;3607 2559 2559 1649 1 HLEAADKGHSPAQKPK GTEFNKQKHLEAADKG HSPAQKPKTSSGTKPS K H L P K T 3 0 0 1 0 1 1 1 2 0 1 3 0 0 2 1 0 0 0 0 0 0 16 2 1712.8958 Q14966;A0A096LPI0;A0A096LPB4;A0A096LPH6 Q14966 596 611 ZNF638 Zinc finger protein 638 yes no 3;4 0.001283 66.152 By MS/MS By MS/MS By MS/MS 2 2 2 25508000 5878800 10492000 9137000 1088 1423 1157 3608;3609;3610;3611;3612;3613 2560;2561;2562;2563 2561 1904 4 HLEVDVWVIEPQGLR LQPGRLAKHLEVDVWV VIEPQGLRFLHVPDTF K H L L R F 0 1 0 1 0 1 2 1 1 1 2 0 0 0 1 0 0 1 0 3 0 0 15 0 1788.9523 Q5T987;Q5T985;P19823 Q5T987 183 197 ITIH2 Inter-alpha-trypsin inhibitor heavy chain H2 yes no 3 0.008003 53.995 By MS/MS By matching By matching 1 1 1 1843200 761240 594470 487490 1089 1177 1158 3614;3615;3616 2564 2564 0 HLHFVDVDDLHIIVQELR AASAPAEKHLHFVDVD HIIVQELRGSILDAMR K H L L R G 0 1 0 3 0 1 1 0 3 2 3 0 0 1 0 0 0 0 0 3 0 0 18 0 2197.1644 Q6PCB0 Q6PCB0 189 206 VWA1 von Willebrand factor A domain-containing protein 1 yes yes 4 0.00064041 118.52 By MS/MS By MS/MS 1 1 4053300 2813800 0 1239400 1090 1551 1159 3617;3618 2565;2566;2567 2566 3 HLHSDSGSSGSR SRLLSEKRHLHSDSGS DSGSSGSRNSSCLDFP R H L S R N 0 1 0 1 0 0 0 2 2 0 1 0 0 0 0 5 0 0 0 0 0 0 12 0 1225.5436 Q969M2 Q969M2 442 453 GJA10 Gap junction alpha-10 protein yes yes 2 0.016083 47.823 By MS/MS 1 0 0 0 0 1091 1718 1160 3619 2568 2568 2359;2360;2361 1 HLLSPVGR TEPGLASRHLLSPVGR HLLSPVGRRQVAGHT_ R H L G R R 0 1 0 0 0 0 0 1 1 0 2 0 0 0 1 1 0 0 0 1 0 0 8 0 877.51339 H7C0W5;H7C1Q6;H7BXF4;B1PBA3;Q9NXE4 H7C0W5 299 306 SMPD4 Sphingomyelin phosphodiesterase 4 yes no 2 0.012287 80.231 By matching By MS/MS By MS/MS 1 1 1 1859300 601640 726470 531150 1092 334 1161 3620;3621;3622 2569;2570 2570 462 2 HLSLPAGQVVPK VELTPMKKHLSLPAGQ PAGQVVPKINSLSLIR K H L P K I 1 0 0 0 0 1 0 1 1 0 2 1 0 0 2 1 0 0 0 2 0 0 12 0 1244.7241 Q8IXS8 Q8IXS8 428 439 FAM126B Protein FAM126B yes yes 2 0.0079816 60.301 By matching By MS/MS By MS/MS 2 1 2 1306600 453990 377040 475570 1093 1616 1162 3623;3624;3625;3626;3627 2571;2572 2571 2216 2 HLSTPSSVSPEPQDSAK LQKARHPKHLSTPSSV PEPQDSAKLRQSGLAN K H L A K L 1 0 0 1 0 1 1 0 1 0 1 1 0 0 3 5 1 0 0 1 0 0 17 0 1765.8483 Q9NZN5;E9PMR6 Q9NZN5 629 645 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2;3 0.00017086 80.859 By MS/MS By MS/MS By matching 2 2 2 6948500 3540700 1932500 1475200 1094 1885 1163 3628;3629;3630;3631;3632;3633 2573;2574;2575 2573 2660 3 HLTPEPDIVASTK VAPAKPPRHLTPEPDI PDIVASTKKPVPARPP R H L T K K 1 0 0 1 0 0 1 0 1 1 1 1 0 0 2 1 2 0 0 1 0 0 13 0 1406.7405 Q5JSH3;H7BY83 Q5JSH3 217 229 WDR44 WD repeat-containing protein 44 yes no 2 0.010708 73.219 By MS/MS By matching By matching 1 1 1 1850700 729290 582050 539380 1095 1486 1164 3634;3635;3636 2576 2576 3405 1 HNLDVVSPIPANK RGVLESVKHNLDVVSP VSPIPANKDLSEADLR K H N N K D 1 0 2 1 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 2 0 0 13 0 1402.7569 A0A0A0MSK6;Q13017 A0A0A0MSK6 759 771 ARHGAP5 Rho GTPase-activating protein 5 yes no 2 0.0073602 59.884 By matching By matching By MS/MS 1 1 1 1663900 595510 649540 418870 1096 153 1165 3637;3638;3639 2577 2577 206 1 HNSWSSSSR QSKSFRRRHNSWSSSS NSWSSSSRHPNQATPK R H N S R H 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 5 0 1 0 0 0 0 9 0 1046.453 H3BQ37;H3BPW9;Q96F86 H3BQ37 159 167 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2 0.010184 68.132 By MS/MS By matching By MS/MS 3 2 2 7960000 3776800 2300300 1882800 1097 831 1166 3640;3641;3642;3643;3644;3645;3646 2578;2579;2580 2579 1118;1119 3 HPDIYAVPIK ARIEIAQKHPDIYAVP DIYAVPIKTHKPDPGT K H P I K T 1 0 0 1 0 0 0 0 1 2 0 1 0 0 2 0 0 0 1 1 0 0 10 0 1151.6339 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1173 1182 TJP2 Tight junction protein ZO-2 yes no 2 0.0023941 81.548 By MS/MS By MS/MS By MS/MS 1 1 1 3685100 1422400 1085000 1177700 1098 272 1167 3647;3648;3649 2581;2582;2583;2584;2585;2586 2585 3611 6 HPDYSVVLLLR FLYEYARRHPDYSVVL YSVVLLLRLAKTYETT R H P L R L 0 1 0 1 0 0 0 0 1 0 3 0 0 0 1 1 0 0 1 2 0 0 11 0 1310.7347 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 362 372 ALB Serum albumin yes no 2;3 0.00050398 86.898 By matching By MS/MS By MS/MS 1 2 2 4578200 1639100 1472400 1466600 + 1099 194 1168 3650;3651;3652;3653;3654 2587;2588;2589 2589 3 HPENYDLATLK LPEGVAFKHPENYDLA NYDLATLKWILENKAG K H P L K W 1 0 1 1 0 0 1 0 1 0 2 1 0 0 1 0 1 0 1 0 0 0 11 0 1299.6459 P78347 P78347 161 171 GTF2I General transcription factor II-I yes yes 2 0.016535 40.882 By MS/MS By matching By matching 1 1 1 17911000 5623500 7375500 4912000 1100 1321 1169 3655;3656;3657 2590 2590 3820 0 HPGGGDYEEL GGGAPGGRHPGGGDYE GGGDYEEL________ R H P E L - 0 0 0 1 0 0 2 3 1 0 1 0 0 0 1 0 0 0 1 0 0 0 10 0 1072.4462 H0Y4Z8;Q3YEC7 H0Y4Z8 721 730 RABL6 Rab-like protein 6 yes no 2 0.0016528 84.244 By MS/MS By MS/MS By MS/MS 1 1 1 7728500 2207700 3310900 2209900 1101 755 1170 3658;3659;3660 2591;2592;2593;2594 2594 3707 4 HPKGEEGSDDDETENGPKPK RKKKKRRRHPKGEEGS TENGPKPKKRRPPKAE R H P P K K 0 0 1 3 0 0 4 3 1 0 0 3 0 0 3 1 1 0 0 0 0 0 20 2 2164.9509 Q6PD62 Q6PD62 963 982 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 3 0.013987 54.764 By MS/MS By matching 1 1 3694500 0 1984500 1709900 1102 1553 1171 3661;3662 2595 2595 2111;3430 1 HPQMSDLFHRQR H P Q R 0 2 0 1 0 2 0 0 2 0 1 0 1 1 1 1 0 0 0 0 0 0 12 1 1550.7525 REV__Q9NVH0 yes yes 2 0.0089547 43.442 By matching By MS/MS By matching 1 1 1 1288800 415110 430910 442800 + 1103 2011 1172 3663;3664;3665 2596 2596 1 HPYFYAPELLFFAK YLYEIARRHPYFYAPE PELLFFAKRYKAAFTE R H P A K R 2 0 0 0 0 0 1 0 1 0 2 1 0 3 2 0 0 0 2 0 0 0 14 0 1741.8868 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;H7C013 A0A0C4DGB6 170 183 ALB Serum albumin yes no 2;3 6.0793E-50 152.07 By MS/MS By MS/MS By MS/MS 2 2 2 28540000 14762000 5577000 8201000 + 1104 194 1173 3666;3667;3668;3669;3670;3671 2597;2598;2599;2600;2601 2599 5 HQQQLLASPGSSTVDNK RLHGQLQRHQQQLLAS GSSTVDNKMLDDLYED R H Q N K M 1 0 1 1 0 3 0 1 1 0 2 1 0 0 1 3 1 0 0 1 0 0 17 0 1808.9017 F2Z2X4;Q9C0E2 F2Z2X4 514 530 XPO4 Exportin-4 yes no 3 0.00081323 62.589 By matching By MS/MS By MS/MS 1 1 1 6328200 2609500 2091500 1627200 1105 626 1174 3672;3673;3674 2602;2603 2602 847 2 HQTLEVSLSRDSPLK LRVQGKEKHQTLEVSL LSRDSPLKTLMSHYEE K H Q L K T 0 1 0 1 0 1 1 0 1 0 3 1 0 0 1 3 1 0 0 1 0 0 15 1 1708.9108 H3BSZ7;Q8NCF5 H3BSZ7 79 93 NFATC2IP NFATC2-interacting protein yes no 3 0.00065597 79.639 By MS/MS By matching By matching 1 1 1 5503900 2246300 1570900 1686700 1106 846 1175 3675;3676;3677 2604 2604 1139 1 HRPSEADEEELAR EEEQRRPKHRPSEADE ADEEELARRREARKQE K H R A R R 2 2 0 1 0 0 4 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 13 1 1537.7121 O14617 O14617 655 667 AP3D1 AP-3 complex subunit delta-1 yes yes 3 1.2921E-07 106.54 By MS/MS By MS/MS By MS/MS 1 1 1 4307700 1672800 1400000 1235000 1107 981 1176 3678;3679;3680 2605;2606;2607 2605 1304 3 HRPSPPATPPPK SASPPRRRHRPSPPAT PPATPPPKTRHSPTPQ R H R P K T 1 1 0 0 0 0 0 0 1 0 0 1 0 0 6 1 1 0 0 0 0 0 12 1 1280.699 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 394 405 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.00033136 99.915 By MS/MS By MS/MS By MS/MS 2 3 3 19352000 4775900 8253900 6321800 1108 322 1177 3681;3682;3683;3684;3685;3686;3687;3688 2608;2609;2610;2611;2612;2613;2614;2615;2616;2617;2618;2619;2620;2621;2622 2614 434;2983 15 HSGGFLSSPADFSQENK TFSNVFGRHSGGFLSS ADFSQENKAPFEAVKR R H S N K A 1 0 1 1 0 1 1 2 1 0 1 1 0 2 1 4 0 0 0 0 0 0 17 0 1806.8173 Q7LBC6 Q7LBC6 772 788 KDM3B Lysine-specific demethylase 3B yes yes 2 0.01867 43.798 By matching By MS/MS By matching 1 1 1 2143900 774930 823070 545920 1109 1574 1178 3689;3690;3691 2623 2623 2141;2142 1 HSHSPASSPKPLKK RSPEASPKHSHSPASS SSPKPLKKQNPSSGAR K H S K K Q 1 0 0 0 0 0 0 0 2 0 1 3 0 0 3 4 0 0 0 0 0 0 14 2 1499.8209 Q9HDC5 Q9HDC5 472 485 JPH1 Junctophilin-1 yes yes 3 0.0066428 53.034 By matching By MS/MS 1 1 1297200 393860 903380 0 1110 1843 1179 3692;3693 2624 2624 2587;2588 1 HSLLLSSSPNR NSTTIMSRHSLLLSSS LLSSSPNRIPSSRLHQ R H S N R I 0 1 1 0 0 0 0 0 1 0 3 0 0 0 1 4 0 0 0 0 0 0 11 0 1209.6466 G1UD79 G1UD79 57 67 SPACIA2 yes yes 2 0.0033631 71.888 By MS/MS By MS/MS By matching 1 1 1 1938200 687650 731840 518680 1111 705 1180 3694;3695;3696 2625;2626 2625 948;949 2 HSSLNKLQAAVKAWDMMM H S M M 3 0 1 1 0 1 0 0 1 0 2 2 3 0 0 2 0 1 0 1 0 0 18 2 2060.0006 REV__B7WPD9 yes yes 3 0.018121 41.202 By MS/MS By matching By matching 1 1 1 2958500 714950 1505500 738020 + 1112 1987 1181 3697;3698;3699 2627 2627 2841;2842 1 HSSPTEERDEPAYPR LQFRSLSRHSSPTEER RDEPAYPRGDSSGSTR R H S P R G 1 2 0 1 0 0 3 0 1 0 0 0 0 0 3 2 1 0 1 0 0 0 15 1 1769.7969 F5H4R1;J3KNB8;F5H538;Q9Y6R4 F5H4R1 1250 1264 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 yes no 3 0.015898 56.286 By MS/MS By matching By matching 1 1 1 4001600 1655000 1106500 1240100 1113 651 1182 3700;3701;3702 2628 2628 3117 1 HSTPSPTR RNADSEIKHSTPSPTR HSTPSPTRYSLSPSKS K H S T R Y 0 1 0 0 0 0 0 0 1 0 0 0 0 0 2 2 2 0 0 0 0 0 8 0 881.43553 P49792 P49792 777 784 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 2 0.012892 92.239 By MS/MS By matching By matching 1 1 1 7376400 2072200 3723500 1580800 1114 1261 1183 3703;3704;3705 2629 2629 1667 1 HTDDEMTGYVATR ILDFGLARHTDDEMTG MTGYVATRWYRAPEIM R H T T R W 1 1 0 2 0 0 1 1 1 0 0 0 1 0 0 0 3 0 1 1 0 0 13 0 1494.6409 E7EX54;B4E0K5;Q16539 E7EX54 97 109 MAPK14 Mitogen-activated protein kinase 14 yes no 2;3 4.3542E-05 94.547 By MS/MS By MS/MS By MS/MS 2 2 3 31217000 5955600 6993900 18267000 1115 356 1184;1185 3706;3707;3708;3709;3710;3711;3712 2630;2631;2632;2633;2634;2635;2636 2636 28 2999;3000;3633 7 HTFSGVASVESSSGEAFHVGK HRAHYDLRHTFSGVAS GEAFHVGKTPIVGQPS R H T G K T 2 0 0 0 0 0 2 3 2 0 0 1 0 2 0 5 1 0 0 3 0 0 21 0 2118.997 CON__P12763 CON__P12763 313 333 yes yes 3 0.001046 54.74 By MS/MS By matching 2 1 3094500 1909300 0 1185100 + 1116 470 1186;1187 3713;3714;3715 2637;2638 2637 616 2 HTGPNSPDTANDGFVR VEMDWVLKHTGPNSPD TANDGFVRLRGLPFGC K H T V R L 1 1 2 2 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 0 16 0 1683.7601 G8JLB6;P31943;E5RGH4;E7EQJ0;D6RAM1;H0YAQ2;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RIU0;D6RDU3;D6RJ04;D6RIH9;D6RBM0;E9PCY7;P55795 G8JLB6 99 114 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 yes no 2;3 1.9929E-30 142.76 By MS/MS By MS/MS By MS/MS 2 2 2 199150000 76638000 73217000 49295000 1117 741 1188 3716;3717;3718;3719;3720;3721 2639;2640;2641;2642;2643 2640 1007;3158 5 HVDSLSQRSPK KNSEPSARHVDSLSQR SLSQRSPKASLRRVEL R H V P K A 0 1 0 1 0 1 0 0 1 0 1 1 0 0 1 3 0 0 0 1 0 0 11 1 1252.6524 K7EJV0;K7EPY1;K7ENL0;Q9UHD8 K7EJV0 62 72 SEPT9 Septin-9 yes no 2 0.009193 61.48 By matching By MS/MS 1 1 1216100 0 656820 559330 1118 936 1189 3722;3723 2644 2644 1246 0 HVFFVDDFDAFK IGSKPSARHVFFVDDF VDDFDAFKKIEDELIT R H V F K K 1 0 0 3 0 0 0 0 1 0 0 1 0 4 0 0 0 0 0 2 0 0 12 0 1485.6929 Q05707;A0A0A0MQT7 Q05707 1188 1199 COL14A1 Collagen alpha-1(XIV) chain yes no 2 0.0062623 71.349 By MS/MS By matching By matching 1 1 1 1617200 863890 395680 357610 1119 1346 1190 3724;3725;3726 2645 2645 1 HVFGESDELIGQK VLGHSERRHVFGESDE SDELIGQKVAHALAEG R H V Q K V 0 0 0 1 0 1 2 2 1 1 1 1 0 1 0 1 0 0 0 1 0 0 13 0 1457.7151 P60174;U3KPS5;U3KQF3;U3KPZ0 P60174 138 150 TPI1 Triosephosphate isomerase yes no 3 6.0071E-12 91.123 By matching By MS/MS By matching 1 1 1 1238600 319200 641520 277880 1120 1303 1191 3727;3728;3729 2646 2646 1 HVFIVDDFESFEK IASKPSERHVFIVDDF DDFESFEKIEDNLITF R H V E K I 0 0 0 2 0 0 2 0 1 1 0 1 0 3 0 1 0 0 0 2 0 0 13 0 1610.7617 D6RGG3;Q99715;A0A087X0A8;H0Y5N9;H0Y991 D6RGG3 2479 2491 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.00021624 94.309 By MS/MS By matching By MS/MS 1 1 1 2714800 1387800 686340 640660 1121 497 1192 3730;3731;3732 2647;2648 2648 2 HVIILMTDGLHNMGGDPITVIDEIR PEGWNRTRHVIILMTD ITVIDEIRDLLYIGKD R H V I R D 0 1 1 3 0 0 1 3 2 5 2 0 2 0 1 0 2 0 0 2 0 0 25 0 2758.4146 A0A0G2JH38;E7ETN3;B4E1Z4;P00751 A0A0G2JH38 382 406 CFB Complement factor B;Complement factor B Ba fragment;Complement factor B Bb fragment yes no 4 3.933E-05 61.345 By matching By MS/MS By matching 1 1 1 5668200 2451100 1256600 1960500 1122 221 1193 3733;3734;3735 2649 2649 1 HVSGITLLSPK PSSKSSKKHVSGITLL GITLLSPKHKYKSGIK K H V P K H 0 0 0 0 0 0 0 1 1 1 2 1 0 0 1 2 1 0 0 1 0 0 11 0 1150.671 Q9P2B7 Q9P2B7 210 220 CFAP97 Cilia- and flagella-associated protein 97 yes yes 2 0.017845 68.44 By MS/MS 1 0 0 0 0 1123 1893 1194 3736 2650 2650 3526 1 HYEDGYPGGSDNYGSLSR YPPDGYSRHYEDGYPG DNYGSLSRVTRIEERY R H Y S R V 0 1 1 2 0 0 1 4 1 0 1 0 0 0 1 3 0 0 3 0 0 0 18 0 1972.8187 C9JZR2;O60716;E9PRE2 C9JZR2 216 233 CTNND1 Catenin delta-1 yes no 3 1.0231E-11 95.554 By MS/MS By MS/MS By MS/MS 1 1 1 25009000 7634300 11288000 6087400 1124 459 1195 3737;3738;3739 2651;2652;2653 2651 3656 3 HYGITSPISLAAPK QQTQPPQKHYGITSPI PISLAAPKETDCVLTQ K H Y P K E 2 0 0 0 0 0 0 1 1 2 1 1 0 0 2 2 1 0 1 0 0 0 14 0 1453.7929 G3V457;G3V3I9;A0A0C4DGK1;G3XAH6;P51003 G3V457 19 32 PAPOLA Poly(A) polymerase alpha yes no 2 7.9407E-05 86.699 By MS/MS By matching By matching 1 1 1 2314500 957580 711250 645640 1125 202 1196 3740;3741;3742 2654 2654 282 1 HYYIAAEEIIWNYAPSGIDIFTK NIRGKHVRHYYIAAEE SGIDIFTKENLTAPGS R H Y T K E 3 0 1 1 0 0 2 1 1 5 0 1 0 1 1 1 1 1 3 0 0 0 23 0 2713.3428 E9PFZ2;P00450;H7C5R1 E9PFZ2 373 395 CP Ceruloplasmin yes no 3 1.8227E-86 153.83 By MS/MS By MS/MS By MS/MS 1 1 1 56522000 18471000 19990000 18061000 1126 579 1197 3743;3744;3745 2655;2656;2657 2655 3 HYYIGIIETTWDYASDHGEK TPAWAKEKHYYIGIIE YASDHGEKKLISVDTE K H Y E K K 1 0 0 2 0 0 2 2 2 3 0 1 0 0 0 1 2 1 3 0 0 0 20 0 2397.0913 E9PFZ2;P00450;D6RE86 E9PFZ2 23 42 CP Ceruloplasmin yes no 3;4 0.0008888 62.438 By matching By MS/MS By MS/MS 2 2 2 7902500 2915500 3219400 1767600 1127 579 1198 3746;3747;3748;3749;3750;3751 2658;2659;2660 2658 3 IAAPELHKGDSDSEEDEPTK KKRKEPVKIAAPELHK SEEDEPTKKKTILQGS K I A T K K 2 0 0 3 0 0 4 1 1 1 1 2 0 0 2 2 1 0 0 0 0 0 20 1 2166.9917 Q92733 Q92733 147 166 PRCC Proline-rich protein PRCC yes yes 3 0.0010007 73.953 By MS/MS By MS/MS By matching 1 1 1 20396000 6580100 8286300 5529200 1128 1707 1199 3752;3753;3754 2661;2662 2662 2344;2345 2 IAASSSFR FPCTTAPKIAASSSFR IAASSSFRSSDKPIRT K I A F R S 2 1 0 0 0 0 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 8 0 837.43447 Q99961 Q99961 283 290 SH3GL1 Endophilin-A2 yes yes 2 0.0079491 131.62 By MS/MS By matching By MS/MS 1 1 1 25661000 9288000 8936100 7437100 1129 1771 1200 3755;3756;3757 2663;2664;2665;2666 2664 2455;2456 4 IACKSPPPESMDTPTSTR TTDDKTTKIACKSPPP MDTPTSTRRRPKTPLG K I A T R R 1 1 0 1 1 0 1 0 0 1 0 1 1 0 4 3 3 0 0 0 0 0 18 1 1973.9187 P46013 P46013 2101 2118 MKI67 Antigen KI-67 yes yes 3 0.012194 45.511 By matching By matching By MS/MS 1 1 1 4235500 1142300 1535700 1557500 1130 1241 1201 3758;3759;3760 2667 2667 1606 1 IACKSPPPESVDTPTSTK MTDEKTTKIACKSPPP VDTPTSTKQWPKRSLR K I A T K Q 1 0 0 1 1 0 1 0 0 1 0 2 0 0 4 3 3 0 0 1 0 0 18 1 1913.9404 P46013 P46013 1127 1144 MKI67 Antigen KI-67 yes yes 2;3 1.3643E-27 126.51 By MS/MS By matching By MS/MS 2 1 2 13025000 7331300 2996400 2697600 1131 1241 1202 3761;3762;3763;3764;3765 2668;2669;2670;2671 2670 1607 4 IACKSPQPDPVDTPASTK TTDEKTTKIACKSPQP VDTPASTKQRPKRNLR K I A T K Q 2 0 0 2 1 1 0 0 0 1 0 2 0 0 4 2 2 0 0 1 0 0 18 1 1910.9408 P46013 P46013 2340 2357 MKI67 Antigen KI-67 yes yes 2 0.016502 49.395 By MS/MS 1 1990900 1990900 0 0 1132 1241 1203 3766 2672 2672 1608 1 IADPEHDHTGFLTEYVATR ICDFGLARIADPEHDH LTEYVATRWYRAPEIM R I A T R W 2 1 0 2 0 0 2 1 2 1 1 0 0 1 1 0 3 0 1 1 0 0 19 0 2171.0283 B3KR49;E9PJF0;E9PQW4;P27361 B3KR49 76 94 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 3 3.0132E-39 131.45 By MS/MS By MS/MS By MS/MS 2 1 2 63090000 29928000 5770500 27391000 1133 337 1204;1205 3767;3768;3769;3770;3771 2673;2674;2675 2673 2990;2991;3626 3 IAEIMIPHENRTSEAMYNK SVLRLEIKIAEIMIPH TSEAMYNKMNISELSA K I A N K M 2 1 2 0 0 0 3 0 1 3 0 1 2 0 1 1 1 0 1 0 0 0 19 1 2246.0824 P78562 P78562 281 299 PHEX Phosphate-regulating neutral endopeptidase yes yes 3 0.0095149 50.053 By MS/MS 1 0 0 0 0 1134 1323 1206 3772 2676 2676 1727;3345;3821 1 IAELRELQMDQQAKK SQDKSLRRIAELRELQ QMDQQAKKHLQEEFDA R I A K K H 2 1 0 1 0 3 2 0 0 1 2 2 1 0 0 0 0 0 0 0 0 0 15 2 1799.9564 E7EVX2 E7EVX2 195 209 GOLGA4 yes yes 3 0.0080882 54.871 By MS/MS 1 0 0 0 0 1135 553 1207 3773 2677 2677 1 IAISPLKSPNK STTQTPNKIAISPLKS SPLKSPNKAVKSTVQT K I A N K A 1 0 1 0 0 0 0 0 0 2 1 2 0 0 2 2 0 0 0 0 0 0 11 1 1166.7023 Q6MZP7 Q6MZP7 307 317 LIN54 Protein lin-54 homolog yes yes 2 0.014106 61.233 By matching By MS/MS By matching 1 1 1 2361700 926210 792610 642830 1136 1540 1208 3774;3775;3776 2678 2678 2095 1 IALVITDGR LPPSPNNRIALVITDG ALVITDGRSDTQRDTT R I A G R S 1 1 0 1 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 956.56548 A0A087X0S5;P12109 A0A087X0S5 721 729 COL6A1 Collagen alpha-1(VI) chain yes no 2 0.0062557 83.265 By MS/MS By MS/MS By MS/MS 1 1 1 973990 498390 227330 248270 1137 101 1209 3777;3778;3779 2679;2680;2681 2679 3 IANPVEGSTDR QMSGAQIKIANPVEGS PVEGSTDRQVTITGSA K I A D R Q 1 1 1 1 0 0 1 1 0 1 0 0 0 0 1 1 1 0 0 1 0 0 11 0 1157.5677 Q15366;H3BSS4;H3BRU6;F8VZX2;F8VRH0 Q15366 323 333 PCBP2 Poly(rC)-binding protein 2 yes no 2 0.015192 60.064 By matching By MS/MS By matching 1 1 1 2035400 922000 976110 137260 1138 1438 1210 3780;3781;3782 2682 2682 1 IAQVSPGPR GRSASKLRIAQVSPGP AQVSPGPRDSPAFPDS R I A P R D 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 1 0 0 0 1 0 0 9 0 923.51886 Q9NQS7 Q9NQS7 259 267 INCENP Inner centromere protein yes yes 2 0.0040351 117.52 By MS/MS By MS/MS By MS/MS 1 1 1 17218000 6375100 6078200 4765000 1139 1846 1211 3783;3784;3785 2683;2684;2685 2685 2591 3 IASDEEIQGTK KKASRTARIASDEEIQ DEEIQGTKDAVIQDLE R I A T K D 1 0 0 1 0 1 2 1 0 2 0 1 0 0 0 1 1 0 0 0 0 0 11 0 1189.5826 Q8WX93 Q8WX93 891 901 PALLD Palladin yes yes 2 0.00015478 91.307 By MS/MS By MS/MS By MS/MS 1 1 1 3415800 3415800 0 0 1140 1686 1212 3786;3787;3788 2686;2687;2688 2688 2312 2 IASDEEIQGTKDAVIQDLER KKASRTARIASDEEIQ AVIQDLERKLRFKEDL R I A E R K 2 1 0 3 0 2 3 1 0 3 1 1 0 0 0 1 1 0 0 1 0 0 20 1 2229.1125 Q8WX93 Q8WX93 891 910 PALLD Palladin yes yes 3 2.1011E-05 80.738 By MS/MS By matching By matching 1 1 1 2419200 1233100 387110 799000 1141 1686 1213 3789;3790;3791 2689 2689 2312 1 IASLEVENQSLR DHGELVVRIASLEVEN EVENQSLRGVVQELQQ R I A L R G 1 1 1 0 0 1 2 0 0 1 2 0 0 0 0 2 0 0 0 1 0 0 12 0 1357.7201 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PPR1;E9PL12;E9PN91;E9PMW7;H0YCK7;E9PIZ1 E9PL71 60 71 EEF1D Elongation factor 1-delta yes no 2 0.011872 63.694 By matching By MS/MS 1 1 1123600 397620 725990 0 1142 109 1214 3792;3793 2690 2690 1 IATGSFLK PIEWVCRRIATGSFLK IATGSFLKRNPGVKEG R I A L K R 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 1 1 0 0 0 0 0 8 0 835.48035 E9PBS1;P22234;D6RF62 E9PBS1 103 110 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 0.013535 74.165 By matching By matching By MS/MS 1 1 1 1157100 362400 360540 434130 1143 561 1215 3794;3795;3796 2691 2691 748 1 IAVAAQNCYK ARQKLDPKIAVAAQNC VAAQNCYKVTNGAFTG K I A Y K V 3 0 1 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 1 1 0 0 10 0 1136.5648 P60174 P60174 97 106 TPI1 Triosephosphate isomerase yes yes 2 0.0064193 77.282 By matching By MS/MS 1 1 1864700 848850 1015900 0 1144 1303 1216 3797;3798 2692 2692 1 ICRDPQTPVLQTK PSKSSVTKICRDPQTP QTPVLQTKHRARAVTC K I C T K H 0 1 0 1 1 2 0 0 0 1 1 1 0 0 2 0 2 0 0 1 0 0 13 1 1554.8188 Q9ULW0 Q9ULW0 363 375 TPX2 Targeting protein for Xklp2 yes yes 2;3 0.0075093 75.819 By MS/MS By matching By MS/MS 2 2 2 8974300 3312500 2971000 2690900 1145 1932 1217 3799;3800;3801;3802;3803;3804 2693;2694 2694 3534 2 IDASKNEEDEGHSNSSPR SAESEGAKIDASKNEE GHSNSSPRHSEAATAQ K I D P R H 1 1 2 2 0 0 3 1 1 1 0 1 0 0 1 4 0 0 0 0 0 0 18 1 1970.8566 D6RAF8;Q14103;D6RD83 D6RAF8 68 85 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2;3 1.2567E-57 151.59 By MS/MS By MS/MS By MS/MS 5 4 5 377170000 127620000 153620000 95931000 1146 484 1218;1219;1220 3805;3806;3807;3808;3809;3810;3811;3812;3813;3814;3815;3816;3817;3818 2695;2696;2697;2698;2699;2700;2701;2702;2703;2704;2705;2706;2707;2708;2709;2710 2696 28 626;627;628 15 IDEDGENTQIEDTEPMSPVLNSK MESLSSHRIDEDGENT MSPVLNSKFVPAENDS R I D S K F 0 0 2 3 0 1 4 1 0 2 1 1 1 0 2 2 2 0 0 1 0 0 23 0 2560.1487 Q12888;A6NNK5;C9JXV0 Q12888 536 558 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.00072766 56.247 By MS/MS By matching By matching 1 1 1 10195000 3695800 3878300 2620600 1147 1367 1221 3819;3820;3821 2711 2711 1802 1 IDEPLEGSEDR HESGASIKIDEPLEGS PLEGSEDRIITITGTQ K I D D R I 0 1 0 2 0 0 3 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 11 0 1258.5677 P61978;S4R359 P61978 423 433 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.018146 57.532 By MS/MS By matching By matching 1 1 1 7704600 2588200 3262100 1854300 1148 1306 1222 3822;3823;3824 2712 2712 1 IDFIPVSPAPSPTR EKSASPKRIDFIPVSP SPAPSPTRGIGKQCFS R I D T R G 1 1 0 1 0 0 0 0 0 2 0 0 0 1 4 2 1 0 0 1 0 0 14 0 1495.8035 Q96E09 Q96E09 137 150 FAM122A Protein FAM122A yes yes 2 0.0092474 53.565 By matching By MS/MS By matching 1 1 1 1398100 511420 544020 342710 1149 1730 1223 3825;3826;3827 2713 2713 2375;2376;3476 1 IDFSSIAVPGTSSPR VQFPNLPRIDFSSIAV VPGTSSPRQRQPPGTQ R I D P R Q 1 1 0 1 0 0 0 1 0 2 0 0 0 1 2 4 1 0 0 1 0 0 15 0 1532.7835 Q5TDH0 Q5TDH0 94 108 DDI2 Protein DDI1 homolog 2 yes yes 2 0.0040382 58.83 By MS/MS By matching By matching 1 1 1 15961000 6366300 4682500 4912200 1150 1513 1224 3828;3829;3830 2714 2714 2045 1 IDFTPVSPAPSPTR EKLYSPKRIDFTPVSP SPAPSPTRGFGKMFVS R I D T R G 1 1 0 1 0 0 0 0 0 1 0 0 0 1 4 2 2 0 0 1 0 0 14 0 1483.7671 G1UD79;Q7Z309 G1UD79 128 141 SPACIA2;FAM122B Protein FAM122B yes no 2 0.0042389 63.827 By MS/MS 1 1007700 0 0 1007700 1151 705 1225 3831 2715 2715 950;951;3140 1 IDISPSTFR KSPEIHRRIDISPSTF DISPSTFRKHGLAHDE R I D F R K 0 1 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 9 0 1034.5397 Q9Y2W1 Q9Y2W1 679 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 3.6089E-06 139.15 By MS/MS By MS/MS By MS/MS 1 1 1 34507000 11485000 12175000 10847000 1152 1960 1226 3832;3833;3834 2716;2717;2718 2716 2801 3 IDISPSTLR KSPEIHRRIDISPSTL DISPSTLRKHTRLAGE R I D L R K 0 1 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 9 0 1000.5553 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 655 663 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0018642 115.91 By MS/MS By MS/MS By MS/MS 1 1 1 78762000 26841000 26097000 25825000 1153 596 1227 3835;3836;3837 2719;2720;2721;2722 2722 796 4 IDISPSTLRK KSPEIHRRIDISPSTL ISPSTLRKHTRLAGEE R I D R K H 0 1 0 1 0 0 0 0 0 2 1 1 0 0 1 2 1 0 0 0 0 0 10 1 1128.6503 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 655 664 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.001863 95.618 By MS/MS By matching By MS/MS 1 1 1 10886000 3749000 3411400 3725200 1154 596 1228 3838;3839;3840 2723;2724 2723 796 2 IDSNISPK MKTSCKFKIDSNISPK IDSNISPKKDSKEFTQ K I D P K K 0 0 1 1 0 0 0 0 0 2 0 1 0 0 1 2 0 0 0 0 0 0 8 0 872.46035 Q9H501 Q9H501 148 155 ESF1 ESF1 homolog yes yes 2 0.013103 91.701 By MS/MS 1 919560 0 0 919560 1155 1823 1229 3841 2725 2725 2555 1 IDSPGFKPASQQVYR AQPQPIHRIDSPGFKP PASQQVYRKDPYPEEM R I D Y R K 1 1 0 1 0 2 0 1 0 1 0 1 0 1 2 2 0 0 1 1 0 0 15 1 1691.8631 A0A087X0K9;G5E9E7 A0A087X0K9 898 912 TJP1 yes no 3 3.3496E-08 99.991 By MS/MS By MS/MS By MS/MS 1 1 1 8268800 2932100 3499000 1837700 1156 98 1230 3842;3843;3844 2726;2727;2728 2726 120 3 IDSTEVIYQPR GMDTFIHRIDSTEVIY TEVIYQPRRKRAKLIG R I D P R R 0 1 0 1 0 1 1 0 0 2 0 0 0 0 1 1 1 0 1 1 0 0 11 0 1319.6721 K7EMR0;K7EQN8;K7EP59;Q15831 K7EMR0 29 39 STK11 Serine/threonine-protein kinase STK11 yes no 2 0.017543 54.066 By MS/MS 1 457380 0 0 457380 1157 945 1231 3845 2729 2729 3732 1 IDTIEIITDR DYFEEYGKIDTIEIIT TIEIITDRQSGKKRGF K I D D R Q 0 1 0 2 0 0 1 0 0 4 0 0 0 0 0 0 2 0 0 0 0 0 10 0 1187.6398 P22626;A0A087WUI2 P22626 138 147 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.0001883 123.21 By MS/MS By MS/MS By matching 1 1 1 5259300 1980800 1956800 1321700 1158 1188 1232 3846;3847;3848 2730;2731 2730 2 IDTLMYLLAYPQK IGYNQRNRIDTLMYLL YLLAYPQKPMVKTKTI R I D Q K P 1 0 0 1 0 1 0 0 0 1 3 1 1 0 1 0 1 0 2 0 0 0 13 0 1567.832 Q9NW08 Q9NW08 705 717 POLR3B DNA-directed RNA polymerase III subunit RPC2 yes yes 2 0.0047127 65.305 By matching By MS/MS 1 1 5137900 0 2892100 2245800 1159 1866 1233 3849;3850 2732 2732 170 3519 1 IEDGVPQHLVLVLGGK FVKSAGSRIEDGVPQH LVLVLGGKSQDDVSRF R I E G K S 0 0 0 1 0 1 1 3 1 1 3 1 0 0 1 0 0 0 0 3 0 0 16 0 1672.9512 E7ENL6;P12111 E7ENL6 929 944 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.010997 39.947 By matching By matching By MS/MS 1 1 1 1018600 497570 302440 218610 1160 522 1234 3851;3852;3853 2733 2733 1 IEDVGSDEEDDSGK KDDEEKPKIEDVGSDE DEEDDSGKDKKKKTKK K I E G K D 0 0 0 4 0 0 3 2 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 0 1493.6005 P08238;Q58FF8 P08238 250 263 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 1.2177E-88 171.11 By MS/MS By MS/MS By MS/MS 1 1 1 21863000 6267200 9189100 6406300 1161 1126 1235 3854;3855;3856 2734;2735;2736;2737;2738;2739 2737 1470 6 IEDVGSDEEDDSGKDK KDDEEKPKIEDVGSDE EDDSGKDKKKKTKKIK K I E D K K 0 0 0 5 0 0 3 2 0 1 0 2 0 0 0 2 0 0 0 1 0 0 16 1 1736.7224 P08238;Q58FF8 P08238 250 265 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 0 252.1 By MS/MS By MS/MS By MS/MS 2 3 3 168510000 37296000 75785000 55433000 1162 1126 1236 3857;3858;3859;3860;3861;3862;3863;3864 2740;2741;2742;2743;2744;2745;2746;2747;2748 2744 1470 9 IEDVGSDEEDDSGKDKK KDDEEKPKIEDVGSDE DDSGKDKKKKTKKIKE K I E K K K 0 0 0 5 0 0 3 2 0 1 0 3 0 0 0 2 0 0 0 1 0 0 17 2 1864.8174 P08238;Q58FF8 P08238 250 266 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2;3 1.7442E-198 196.45 By MS/MS By MS/MS By MS/MS 3 3 3 462490000 152270000 205490000 104720000 1163 1126 1237 3865;3866;3867;3868;3869;3870;3871;3872;3873 2749;2750;2751;2752;2753;2754;2755;2756;2757;2758 2755 1470 10 IEEFVYEKLDR LQPNPNARIEEFVYEK FVYEKLDRKAPSRINN R I E D R K 0 1 0 1 0 0 3 0 0 1 1 1 0 1 0 0 0 0 1 1 0 0 11 1 1439.7296 A0A087WW40;Q9Y371 A0A087WW40 75 85 SH3GLB1 Endophilin-B1 yes no 2 0.00078767 91.584 By MS/MS By matching By MS/MS 1 1 1 5020200 1921900 1362500 1735800 1164 56 1238 3874;3875;3876 2759;2760 2759 3576 2 IEEGVPQFLVLISSGK FKRPLGSRIEEGVPQF LVLISSGKSDDEVDDP R I E G K S 0 0 0 0 0 1 2 2 0 2 2 1 0 1 1 2 0 0 0 2 0 0 16 0 1714.9505 E7ENL6;P12111 E7ENL6 725 740 COL6A3 Collagen alpha-3(VI) chain yes no 2 6.7533E-08 98.942 By MS/MS By MS/MS By MS/MS 1 1 1 12119000 4706200 3428400 3984200 1165 522 1239 3877;3878;3879 2761;2762;2763 2761 3 IEEVLSPEGSPSKSPSK ITIKSPEKIEEVLSPE SPSKSPSKKKKKFRTP K I E S K K 0 0 0 0 0 0 3 1 0 1 1 2 0 0 3 5 0 0 0 1 0 0 17 1 1769.9047 Q9UEY8 Q9UEY8 668 684 ADD3 Gamma-adducin yes yes 2 0.0070894 55.452 By matching By matching By MS/MS 1 1 1 1808100 671820 501470 634780 1166 1899 1240 3880;3881;3882 2764 2764 2675;2676;2677 1 IEIAQKHPDIYAVPIK LQEAQNARIEIAQKHP DIYAVPIKTHKPDPGT R I E I K T 2 0 0 1 0 1 1 0 1 4 0 2 0 0 2 0 0 0 1 1 0 0 16 1 1834.0353 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1167 1182 TJP2 Tight junction protein ZO-2 yes no 3 0.0048158 53.3 By MS/MS By MS/MS By matching 1 1 1 2430500 1125600 641650 663240 1167 272 1241 3883;3884;3885 2765;2766 2765 3611 2 IEIESFYEGEDFSETLTR LSSQHQARIEIESFYE DFSETLTRAKFEELNM R I E T R A 0 1 0 1 0 0 5 1 0 2 1 0 0 2 0 2 2 0 1 0 0 0 18 0 2163.9848 P11021 P11021 307 324 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0002636 96.464 By MS/MS By MS/MS By MS/MS 1 1 1 10013000 4288800 2369700 3354800 1168 1141 1242 3886;3887;3888 2767;2768;2769 2767 3 IEKIGEGTYGVVYK ________________ GTYGVVYKGRHKTTGQ K I E Y K G 0 0 0 0 0 0 2 3 0 2 0 2 0 0 0 0 1 0 2 2 0 0 14 1 1554.8294 E5RIU6;A0A087WZZ9;A0A024QZP7;P06493 E5RIU6 7 20 CDK1;CDC2 Cyclin-dependent kinase 1 yes no 2;3 0.0048501 72.615 By MS/MS By MS/MS By MS/MS 3 3 2 16931000 7272800 5562500 4095200 1169 1 1243;1244 3889;3890;3891;3892;3893;3894;3895;3896 2770;2771;2772;2773;2774 2772 2865;3569;3570 5 IEPIPGESPK KGQEVCVKIEPIPGES PIPGESPKMFGRHFEA K I E P K M 0 0 0 0 0 0 2 1 0 2 0 1 0 0 3 1 0 0 0 0 0 0 10 0 1065.5706 A0A087WUT6;O60841 A0A087WUT6 1161 1170 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0021413 81.525 By MS/MS By MS/MS By MS/MS 1 1 1 2070900 754930 728610 587350 1170 41 1245 3897;3898;3899 2775;2776;2777;2778 2777 46 4 IERHAMYCNGLMEEDTVLTR DQCFPPTKIERHAMYC EEDTVLTRRQKEAKTK K I E T R R 1 2 1 1 1 0 3 1 1 1 2 0 2 0 0 0 2 0 1 1 0 0 20 1 2437.1188 Q96RL1 Q96RL1 517 536 UIMC1 BRCA1-A complex subunit RAP80 yes yes 3 0.013838 46.621 By MS/MS 1 0 0 0 0 1171 1756 1246 3900 2779 2779 3483;3896 1 IERNSEQTNQLRNK MKPQEVAKIERNSEQT QTNQLRNKLSFHPNNL K I E N K L 0 2 3 0 0 2 2 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 14 2 1728.8867 A0A087X014;Q7Z570 A0A087X014 780 793 ZNF804A Zinc finger protein 804A yes no 2 0.016526 41.704 By MS/MS 1 0 0 0 0 1172 92 1247 3901 2780 2780 112 1 IESDEEEDFENVGK ESTKKPYRIESDEEED EDFENVGKVGSPLDYS R I E G K V 0 0 1 2 0 0 5 1 0 1 0 1 0 1 0 1 0 0 0 1 0 0 14 0 1638.6897 Q96T23 Q96T23 1343 1356 RSF1 Remodeling and spacing factor 1 yes yes 2 0.00015634 84.507 By matching By MS/MS By MS/MS 1 1 1 5539300 2041700 2131800 1365700 1173 1761 1248 3902;3903;3904 2781;2782 2781 2440 2 IESPKLER VVTQPKPKIESPKLER IESPKLERTPNGPNID K I E E R T 0 1 0 0 0 0 2 0 0 1 1 1 0 0 1 1 0 0 0 0 0 0 8 1 970.54475 Q5TBM3;A0A0A0MSM0;Q92598 Q5TBM3 71 78 HSPH1 Heat shock protein 105 kDa yes no 2 0.01387 100.09 By matching By MS/MS By matching 1 1 1 100210000 35916000 36114000 28176000 1174 154 1249 3905;3906;3907 2783 2783 207 1 IETIEVMEDR DYFEKYGKIETIEVME TIEVMEDRQSGKKRGF K I E D R Q 0 1 0 1 0 0 3 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1233.5911 P51991 P51991 152 161 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 2 0.015474 49.423 By MS/MS 1 0 0 0 0 1175 1282 1250 3908 2784 2784 1 IEVIEIMTDR DYFEQYGKIEVIEIMT VIEIMTDRGSGKKRGF K I E D R G 0 1 0 1 0 0 2 0 0 3 0 0 1 0 0 0 1 0 0 1 0 0 10 0 1217.6326 F8W6I7;P09651;F8VTQ5;H0YH80;F8VZ49;Q32P51;F8VYN5 F8W6I7 131 140 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 0.0042296 66.435 By MS/MS 1 0 0 0 0 1176 686 1251 3909 2785 2785 46 1 IEVKEESPQSKAETELK EGLEECSKIEVKEESP SKAETELKASQKPIRK K I E L K A 1 0 0 0 0 1 5 0 0 1 1 3 0 0 1 2 1 0 0 1 0 0 17 2 1944.0052 P11171 P11171 182 198 EPB41 Protein 4.1 yes yes 3 0.0059043 44.925 By matching By MS/MS By matching 1 1 1 3671900 1304900 1278200 1088800 1177 1143 1252 3910;3911;3912 2786 2786 1485;3288 1 IEVLDSPASK NSEGGKGKIEVLDSPA VLDSPASKKKK_____ K I E S K K 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 0 0 0 1 0 0 10 0 1057.5655 Q8N5I9 Q8N5I9 173 182 C12orf45 Uncharacterized protein C12orf45 yes yes 2 0.0014597 88.803 By MS/MS By MS/MS By MS/MS 1 1 1 1797800 606650 694400 496710 1178 1637 1253 3913;3914;3915 2787;2788;2789;2790;2791 2791 2243 5 IEVLEEELR DLKLKNTKIEVLEEEL EVLEEELRLARDANSE K I E L R L 0 1 0 0 0 0 4 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1128.6027 P15924 P15924 1034 1042 DSP Desmoplakin yes yes 2 0.0059152 85.161 By MS/MS By matching By matching 1 1 1 2507000 1111300 693080 702630 1179 1161 1254 3916;3917;3918 2792 2792 1 IFAISQQQQQQSKSK QTEEAIDRIFAISQQQ QQQQSKSKKNRRAGKR R I F S K K 1 0 0 0 0 6 0 0 0 2 0 2 0 1 0 3 0 0 0 0 0 0 15 1 1747.9217 Q9UL01 Q9UL01 793 807 DSE Dermatan-sulfate epimerase yes yes 2 0.0095602 43.897 By MS/MS By matching By matching 1 1 1 1280600 480680 375330 424600 1180 1921 1255 3919;3920;3921 2793 2793 1 IFDEILVNAADNK TFVPGLYKIFDEILVN LVNAADNKQRDPKMSC K I F N K Q 2 0 2 2 0 0 1 0 0 2 1 1 0 1 0 0 0 0 0 1 0 0 13 0 1460.7511 Q02880;J3KTB7;E9PCY5;P11388 P11388 84 96 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 2 0.0072737 82.417 By MS/MS 1 0 0 0 0 1181 1145;1335 1256 3922 2794 2794 1 IFGVTTLDIVR HGVYNPNKIFGVTTLD VTTLDIVRANTFVAEL K I F V R A 0 1 0 1 0 0 0 1 0 2 1 0 0 1 0 0 2 0 0 2 0 0 11 0 1232.7129 G3XAL0;P40926 G3XAL0 59 69 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 2 0.0029527 98.582 By MS/MS By MS/MS By matching 1 1 1 751130 282900 276560 191670 1182 731 1257 3923;3924;3925 2795;2796 2796 2 IFNLMEKDSYR CFDEAQKKIFNLMEKD LMEKDSYRRFLKSRFY K I F Y R R 0 1 1 1 0 0 1 0 0 1 1 1 1 1 0 1 0 0 1 0 0 0 11 1 1414.6915 P49798 P49798 156 166 RGS4 Regulator of G-protein signaling 4 yes yes 2 0.017777 55.452 By MS/MS 1 0 0 0 0 1183 1262 1258 3926 2797 2797 1669 1 IFPLRPDYQEPSR GSNSTYDRIFPLRPDY PDYQEPSRLIRKLPEF R I F S R L 0 2 0 1 0 1 1 0 0 1 1 0 0 1 3 1 0 0 1 0 0 0 13 1 1616.8311 Q16832;Q5T241;H0Y570 Q16832 474 486 DDR2 Discoidin domain-containing receptor 2 yes no 3 0.016301 45.257 By matching By MS/MS By matching 1 1 1 946700 312290 322450 311950 1184 1459 1259 3927;3928;3929 2798 2798 3852 0 IFSLSGTLETVRGRGVVGR QLRERHWRIFSLSGTL RGRGVVGREPVLSKEQ R I F G R E 0 3 0 0 0 0 1 4 0 1 2 0 0 1 0 2 2 0 0 3 0 0 19 2 2003.1276 B4DEM9;Q9Y2S7 B4DEM9 268 286 POLDIP2 Polymerase delta-interacting protein 2 yes no 2 0.011574 51.841 By MS/MS 1 0 0 0 0 1185 341 1260 3930 2799 2799 468;469;2994 1 IFTSIGEDYDER PVASQLPRIFTSIGED IGEDYDERVLPSITT_ R I F E R V 0 1 0 2 0 0 2 1 0 2 0 0 0 1 0 1 1 0 1 0 0 0 12 0 1443.6518 D6RBK0;C9JZ20;E7ESE2;E9PCW0;C9JW96;P35232 D6RBK0 106 117 PHB Prohibitin yes no 2 0.001052 87.298 By matching By MS/MS By matching 1 1 1 1885200 514700 1059700 310770 1186 451 1261 3931;3932;3933 2800 2800 1 IFVEESIYDEFVR QCCIAASRIFVEESIY SIYDEFVRRSVERAKK R I F V R R 0 1 0 1 0 0 3 0 0 2 0 0 0 2 0 1 0 0 1 2 0 0 13 0 1644.8035 P00352 P00352 309 321 ALDH1A1 Retinal dehydrogenase 1 yes yes 2 6.3214E-05 96.015 By MS/MS By MS/MS By MS/MS 1 1 1 5989600 2543800 1738800 1707000 1187 1078 1262 3934;3935;3936 2801;2802;2803 2801 3 IFVGGLNPEATEEK MKKDPVKKIFVGGLNP NPEATEEKIREYFGEF K I F E K I 1 0 1 0 0 0 3 2 0 1 1 1 0 1 1 0 1 0 0 1 0 0 14 0 1502.7617 D6R9P3;D6RD18;D6RBZ0 D6R9P3 156 169 HNRNPAB yes no 2 0.0087398 60.691 By matching By MS/MS By matching 1 1 1 1881900 509230 1090100 282560 1188 481 1263 3937;3938;3939 2804 2804 1 IFVGGLSPDTPEEK KTKEPVKKIFVGGLSP SPDTPEEKIREYFGGF K I F E K I 0 0 0 1 0 0 2 2 0 1 1 1 0 1 2 1 1 0 0 1 0 0 14 0 1487.7508 D6RAF8;Q14103;D6RF44;H0YA96;H0Y8G5 D6RAF8 184 197 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.008245 61.435 By MS/MS By matching By MS/MS 1 1 1 2989700 1034000 1534300 421350 1189 484 1264 3940;3941;3942 2805;2806 2806 2 IGDEYAEDSSDEEDIR RTEMASARIGDEYAED SSDEEDIRNTVGNVPL R I G I R N 1 1 0 4 0 0 4 1 0 2 0 0 0 0 0 2 0 0 1 0 0 0 16 0 1841.7439 A0A075B729;Q14137 A0A075B729 48 63 BOP1 Ribosome biogenesis protein BOP1 yes no 2 0.013651 46.3 By MS/MS 1 738410 0 738410 0 1190 11 1265 3943 2807 2807 8 1 IGEGTYGTVFK QKYEKLEKIGEGTYGT GTYGTVFKAKNRETHE K I G F K A 0 0 0 0 0 0 1 3 0 1 0 1 0 1 0 0 2 0 1 1 0 0 11 0 1170.5921 Q00535 Q00535 10 20 CDK5 Cyclin-dependent-like kinase 5 yes yes 2 0.0080533 63.426 By MS/MS By matching By matching 1 1 1 2016600 830230 661140 525180 1191 1325 1266 3944;3945;3946 2808 2808 3822 1 IGEGTYGVVYK EDYTKIEKIGEGTYGV GTYGVVYKGRHKTTGQ K I G Y K G 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 0 11 0 1184.6077 E5RIU6;A0A087WZZ9;A0A024QZP7;P06493;G3V317;K7ELV5;E7ESI2;G3V5T9;P24941;Q00526 E5RIU6 10 20 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 no no 2 0.00098824 89.247 By MS/MS By MS/MS By MS/MS 2 3 3 350110000 126790000 128320000 94995000 1192 1;537 1267;1268 3947;3948;3949;3950;3951;3952;3953;3954 2809;2810;2811;2812;2813;2814 2810 2865;3062;3569;3570;3666;3667 5 IGEGTYGVVYKGR EDYTKIEKIGEGTYGV YGVVYKGRHKTTGQVV K I G G R H 0 1 0 0 0 0 1 4 0 1 0 1 0 0 0 0 1 0 2 2 0 0 13 1 1397.7303 E5RIU6;A0A087WZZ9;A0A024QZP7;P06493 E5RIU6 10 22 CDK1;CDC2 Cyclin-dependent kinase 1 yes no 2 0.0051561 67.207 By MS/MS By matching By matching 1 1 1 3468000 806110 897150 1764700 1193 1 1269 3955;3956;3957 2815 2815 2865;3569;3570 1 IGEYKQLMRSR IVDGKKLRIGEYKQLM YKQLMRSRRQEMRQFF R I G S R R 0 2 0 0 0 1 1 1 0 1 1 1 1 0 0 1 0 0 1 0 0 0 11 2 1379.7344 P35712 P35712 707 717 SOX6 Transcription factor SOX-6 yes yes 2 0.010163 44.863 By matching By MS/MS By matching 1 1 1 1880800 704900 670150 505780 1194 1225 1270 3958;3959;3960 2816 2816 1585;3781 1 IGGIGTVPVGR LPLQDVYKIGGIGTVP IGTVPVGRVETGVLKP K I G G R V 0 1 0 0 0 0 0 4 0 2 0 0 0 0 1 0 1 0 0 2 0 0 11 0 1024.6029 Q5VTE0;P68104;A0A087WVQ9;Q05639 Q5VTE0 256 266 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.0040613 76.827 By MS/MS By MS/MS By MS/MS 1 1 1 7524200 2392200 4336900 795130 1195 1317 1271 3961;3962;3963 2817;2818;2819 2819 3 IGGSVHLIVNNQLGYTTPAER LSNLPHFRIGGSVHLI GYTTPAERGRSSLYCS R I G E R G 1 1 2 0 0 1 1 3 1 2 2 0 0 0 1 1 2 0 1 2 0 0 21 0 2238.1757 H7C1J3;Q96HY7 H7C1J3 54 74 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes no 3 0.0035109 43.946 By matching By MS/MS 1 1 2395900 1427300 968600 0 1196 864 1272 3964;3965 2820 2820 43;44 1 IGPLGLSPK ATSALAPKIGPLGLSP GPLGLSPKKVGDDIAK K I G P K K 0 0 0 0 0 0 0 2 0 1 2 1 0 0 2 1 0 0 0 0 0 0 9 0 880.5382 P30050 P30050 32 40 RPL12 60S ribosomal protein L12 yes yes 2 0.0068433 78.513 By MS/MS By MS/MS 1 2 4735800 2461100 2274700 0 1197 1206 1273;1274 3966;3967;3968 2821;2822;2823;2824;2825 2822 1563 5 IGQQVDREPGDVATPPR RLCKQLEKIGQQVDRE GDVATPPRKRKKIVVE K I G P R K 1 2 0 2 0 2 1 2 0 1 0 0 0 0 3 0 1 0 0 2 0 0 17 1 1833.9333 H3BT22;Q9Y5N6 H3BT22 133 149 ORC6 Origin recognition complex subunit 6 yes no 3 0.0014287 80.102 By MS/MS By MS/MS By matching 1 1 1 6273800 2424700 2149600 1699600 1198 847 1275 3969;3970;3971 2826;2827 2826 3185 2 IGSDPLAYEPK SPTMSRARIGSDPLAY DPLAYEPKEDLPVITI R I G P K E 1 0 0 1 0 0 1 1 0 1 1 1 0 0 2 1 0 0 1 0 0 0 11 0 1188.6027 P19634 P19634 701 711 SLC9A1 Sodium/hydrogen exchanger 1 yes yes 2 0.0069994 64.121 By matching By MS/MS 1 1 945050 393450 0 551590 1199 1176 1276 3972;3973 2828 2828 1527 1 IGTAEPDYGALYEGR INEEALEKIGTAEPDY YGALYEGRNPGFYVEA K I G G R N 2 1 0 1 0 0 2 3 0 1 1 0 0 0 1 0 1 0 2 0 0 0 15 0 1610.7577 P19174 P19174 764 778 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes yes 2 5.5582E-07 92.247 By MS/MS By matching By MS/MS 1 1 1 9388100 3133900 3711700 2542500 1200 1174 1277 3974;3975;3976 2829;2830 2829 3771 2 IGTLHTSPDLK FVRKTTEKIGTLHTSP LHTSPDLKVRPELRGD K I G L K V 0 0 0 1 0 0 0 1 1 1 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1180.6452 Q9UPZ3 Q9UPZ3 557 567 HPS5 Hermansky-Pudlak syndrome 5 protein yes yes 2 0.012196 55.776 By matching By matching By MS/MS 1 1 1 2214300 846030 688610 679690 1201 1944 1278 3977;3978;3979 2831 2831 2750 1 IGYLGYCKGVEPKTECER ________________ EPKTECERLAGTESPV M I G E R L 0 1 0 0 2 0 3 3 0 1 1 2 0 0 1 0 1 0 2 1 0 0 18 2 2158.0187 G3V0E5 G3V0E5 2 19 TFRC yes yes 3 0.016088 43.791 By MS/MS 1 0 0 0 0 1202 706 1279 3980 2832 2832 3141;3698 1 IHHFIINNKDTFFSNATR TGPFSRARIHHFIINN TFFSNATRSRIVYHML R I H T R S 1 1 3 1 0 0 0 0 2 3 0 1 0 3 0 1 2 0 0 0 0 0 18 1 2174.1021 E9PQ79;Q9BYT9 E9PQ79 272 289 ANO3 Anoctamin;Anoctamin-3 yes no 3 0.010718 40.856 By MS/MS By matching By matching 1 1 1 14919000 6924000 1915400 6079900 1203 618 1280 3981;3982;3983 2833 2833 837;3104;3105 1 IHIDPEIQDGSPTTSR DSKAQAHRIHIDPEIQ DGSPTTSRRPSGTGTG R I H S R R 0 1 0 2 0 1 1 1 1 3 0 0 0 0 2 2 2 0 0 0 0 0 16 0 1764.8642 C9J542;P50479 C9J542 43 58 PDLIM4 PDZ and LIM domain protein 4 yes no 2 0.00096511 77.222 By MS/MS By MS/MS By matching 1 1 1 4284300 1647600 1339600 1297200 1204 413 1281 3984;3985;3986 2834;2835 2835 550 2 IHLGSSPK NQGVSEERIHLGSSPK IHLGSSPKKGGNCDLS R I H P K K 0 0 0 0 0 0 0 1 1 1 1 1 0 0 1 2 0 0 0 0 0 0 8 0 837.47085 Q5JW53;Q9H410 Q5JW53 53 60 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.011972 86.136 By matching By MS/MS By MS/MS 1 1 1 5991000 2097900 2234400 1658700 1205 1490 1282 3987;3988;3989 2836;2837 2837 2004;2005 2 IHRASDPGLPAEEPK GRFHLPPRIHRASDPG GLPAEEPKEKSSRKVA R I H P K E 2 1 0 1 0 0 2 1 1 1 1 1 0 0 3 1 0 0 0 0 0 0 15 1 1615.8318 F8VPD4;P27708 F8VPD4 1792 1806 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 3 0.00078128 74.475 By matching By MS/MS By MS/MS 1 1 1 29418000 9090200 9990700 10337000 1206 664 1283 3990;3991;3992 2838;2839 2839 890 2 IHRASDPGLPAEEPKEK GRFHLPPRIHRASDPG PAEEPKEKSSRKVAEP R I H E K S 2 1 0 1 0 0 3 1 1 1 1 2 0 0 3 1 0 0 0 0 0 0 17 2 1872.9694 F8VPD4;P27708 F8VPD4 1792 1808 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 3;4 0.00078168 73.252 By MS/MS By MS/MS By MS/MS 2 2 2 67840000 23939000 24177000 19724000 1207 664 1284 3993;3994;3995;3996;3997;3998 2840;2841;2842;2843 2840 890 3 IHSPIPDMSK TSPSTATKIHSPIPDM SPIPDMSKFATGITPF K I H S K F 0 0 0 1 0 0 0 0 1 2 0 1 1 0 2 2 0 0 0 0 0 0 10 0 1123.5696 Q6NZY4 Q6NZY4 656 665 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 2 0.0045935 70.412 By matching By matching By MS/MS 1 1 1 15379000 4768400 5977700 4633400 1208 1543 1285 3999;4000;4001 2844 2844 2097 1 IIGEDSPSRLDR LYKGTITRIIGEDSPS DSPSRLDRGREDSLPK R I I D R G 0 2 0 2 0 0 1 1 0 2 1 0 0 0 1 2 0 0 0 0 0 0 12 1 1356.6997 C9J7T7;C9JE98;C9J0Q5;C9JFD3;Q9Y618;C9JQE8 C9J7T7 794 805 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.0032103 78.556 By matching By MS/MS 1 1 3581600 1874700 0 1706900 1209 402 1286 4002;4003 2845 2845 541 1 IIGEKSFR LCDFGFARIIGEKSFR IIGEKSFRRSVVGTPA R I I F R R 0 1 0 0 0 0 1 1 0 2 0 1 0 1 0 1 0 0 0 0 0 0 8 1 948.53927 B4DTS2;Q9BZL6;Q15139;H0Y5M6;F8WBA3;O94806 Q15139 733 740 PRKD2;PRKD1;PRKD3 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase D3 no no 2 0.016186 98.04 By matching By MS/MS By matching 1 1 1 9254900 3225200 3215000 2814800 1210 1434;1051;348 1287 4004;4005;4006 2846 2846 477 1 IILDLISESPIKGR DRVVECIKIILDLISE SESPIKGRAQPYDPNF K I I G R A 0 1 0 1 0 0 1 1 0 4 2 1 0 0 1 2 0 0 0 0 0 0 14 1 1552.9188 P61978;Q5T6W2 P61978 208 221 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0073086 63.624 By MS/MS By MS/MS By matching 1 1 1 3385800 1424200 714600 1247100 1211 1306 1288 4007;4008;4009 2847;2848 2847 1719 2 IISDMWGVLAKQQTHVR VFVAIVRKIISDMWGV AKQQTHVRKHQFDHGE K I I V R K 1 1 0 1 0 2 0 1 1 2 1 1 1 0 0 1 1 1 0 2 0 0 17 1 1981.0568 A0A1B0GW05;Q2PZI1 A0A1B0GW05 499 515 DPY19L1 Probable C-mannosyltransferase DPY19L1 yes no 3 0.017598 40.237 By MS/MS 1 0 0 0 0 1212 285 1289 4010 2849 2849 377;2962 1 IISFLYSTVGALNK IGDENFNKIISFLYST STVGALNKIGTDGTQV K I I N K I 1 0 1 0 0 0 0 1 0 2 2 1 0 1 0 2 1 0 1 1 0 0 14 0 1524.8552 Q05707;A0A0A0MQT7 Q05707 1051 1064 COL14A1 Collagen alpha-1(XIV) chain yes no 2 7.5525E-12 112.83 By MS/MS By MS/MS By MS/MS 1 1 1 5580000 2416600 1501200 1662200 1213 1346 1290 4011;4012;4013 2850;2851;2852 2850 3 IISIFSGTEK EEKKPRHKIISIFSGT SIFSGTEKGSKKKEKE K I I E K G 0 0 0 0 0 0 1 1 0 3 0 1 0 1 0 2 1 0 0 0 0 0 10 0 1093.6019 Q13177 Q13177 53 62 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 2 0.0034503 78.342 By matching By MS/MS By matching 1 1 1 4586900 1267800 1775900 1543200 1214 1379 1291 4014;4015;4016 2853 2853 1825;3363 1 IISNASCTTNCLAPLAK EKYDNSLKIISNASCT NCLAPLAKVIHDNFGI K I I A K V 3 0 2 0 2 0 0 0 0 2 2 1 0 0 1 2 2 0 0 0 0 0 17 0 1832.9125 P04406;E7EUT5 P04406 146 162 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 7.7932E-13 103.21 By MS/MS By MS/MS By matching 1 1 1 7964900 3195900 2733500 2035500 1215 1103 1292 4017;4018;4019 2854;2855 2854 2 IIYDSDSESEETLQVK KQPSKKKRIIYDSDSE SEETLQVKNAKKPPEK R I I V K N 0 0 0 2 0 1 3 0 0 2 1 1 0 0 0 3 1 0 1 1 0 0 16 0 1854.8735 P35251;D6RAD2;E0CX09 P35251 65 80 RFC1 Replication factor C subunit 1 yes no 2 0.0019835 77.192 By MS/MS By MS/MS 1 1 2496600 1150400 1346200 0 1216 1218 1293 4020;4021 2856;2857 2857 1567;1568;3780 2 IIYGGSVTGATCK DAVAQSTRIIYGGSVT SVTGATCKELASQPDV R I I C K E 1 0 0 0 1 0 0 3 0 2 0 1 0 0 0 1 2 0 1 1 0 0 13 0 1325.6649 P60174 P60174 244 256 TPI1 Triosephosphate isomerase yes yes 2 0.00012619 89.629 By MS/MS By matching 1 1 740290 0 360660 379630 1217 1303 1294 4022;4023 2858 2858 3343 1 IIYNLFHK SAEDKSYRIIYNLFHK IIYNLFHKTVPEFKYR R I I H K T 0 0 1 0 0 0 0 0 1 2 1 1 0 1 0 0 0 0 1 0 0 0 8 0 1046.5913 H7C5K7;C9JXM5;G5E9W1;Q7Z3E1 H7C5K7 179 186 TIPARP TCDD-inducible poly [ADP-ribose] polymerase yes no 2 0.011378 60.961 By MS/MS 1 0 0 0 0 1218 454 1295 4024 2859 2859 3652 1 IIYRPVAGGESR PGRVLRYRIIYRPVAG PVAGGESREVTTPPNQ R I I S R E 1 2 0 0 0 0 1 2 0 2 0 0 0 0 1 1 0 0 1 1 0 0 12 1 1316.7201 D6RGG3;Q99715 D6RGG3 755 766 COL12A1 Collagen alpha-1(XII) chain yes no 3 0.0063 55.261 By MS/MS 1 300200 300200 0 0 1219 497 1296 4025 2860 2860 1 IKNENTEGSPQEDGVELEGLK AEKKNKKKIKNENTEG GVELEGLKQRLEKKQK K I K L K Q 0 0 2 1 0 1 5 3 0 1 2 2 0 0 1 1 1 0 0 1 0 0 21 1 2285.1023 P11388 P11388 1239 1259 TOP2A DNA topoisomerase 2-alpha yes yes 3 2.4511E-17 95.414 By MS/MS By MS/MS By MS/MS 1 1 1 31595000 12423000 10339000 8833600 1220 1145 1297 4026;4027;4028 2861;2862;2863 2862 1489 3 IKNMATTTPR NARDNLNRIKNMATTT NMATTTPRKTIFPNLI R I K P R K 1 1 1 0 0 0 0 0 0 1 0 1 1 0 1 0 3 0 0 0 0 0 10 1 1131.607 Q8N456 Q8N456 224 233 LRRC18 Leucine-rich repeat-containing protein 18 yes yes 2 0.0044586 65.465 By MS/MS By matching 1 1 5116600 2979600 0 2136900 1221 1631 1298 4029;4030 2864 2864 3456;3457 1 IKTEPSSPLSDPSDIIR ASPVTEVRIKTEPSSP SDPSDIIRVTVGDAAT R I K I R V 0 1 0 2 0 0 1 0 0 3 1 1 0 0 3 4 1 0 0 0 0 0 17 1 1853.9735 Q9ULJ3 Q9ULJ3 429 445 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes yes 2;3 0.0069112 52.071 By MS/MS By MS/MS By matching 2 2 2 6692300 2969000 1715300 2008000 1222 1926 1299 4031;4032;4033;4034;4035;4036 2865;2866 2866 2720;2721 2 ILATDVSSKNTPDSK QAHEVHQKILATDVSS SKNTPDSKKISSRNIN K I L S K K 1 0 1 2 0 0 0 0 0 1 1 2 0 0 1 3 2 0 0 1 0 0 15 1 1574.8152 H0Y8J2;Q03188 H0Y8J2 27 41 CENPC Centromere protein C yes no 2;3 8.3329E-18 119.96 By MS/MS By MS/MS By MS/MS 2 2 2 8819500 3753800 2753400 2312300 1223 771 1300 4037;4038;4039;4040;4041;4042 2867;2868;2869;2870 2868 1052;3165 4 ILDEEVFEGDIQQLLFVSDHR GIIVFGTRILDEEVFE LLFVSDHRAAYDYCEH R I L H R A 0 1 0 3 0 2 3 1 1 2 3 0 0 2 0 1 0 0 0 2 0 0 21 0 2501.2438 A0A087WXW9;P20908 A0A087WXW9 211 231 COL5A1 Collagen alpha-1(V) chain yes no 3 3.1283E-20 100.67 By MS/MS By MS/MS By MS/MS 1 1 1 6345500 2805700 1634900 1904900 1224 74 1301 4043;4044;4045 2871;2872;2873 2871 3 ILELSTQAR TSHEHRERILELSTQA LELSTQARMELQQLIS R I L A R M 1 1 0 0 0 1 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 9 0 1029.5819 Q9UBT7 Q9UBT7 346 354 CTNNAL1 Alpha-catulin yes yes 2 0.014574 91.658 By MS/MS By MS/MS 1 1 1048100 508950 539140 0 1225 1897 1302 4046;4047 2874;2875 2875 3529 2 ILELTPEPDRPR LIQHQDMRILELTPEP TPEPDRPRILPPDQRP R I L P R I 0 2 0 1 0 0 2 0 0 1 2 0 0 0 3 0 1 0 0 0 0 0 12 1 1434.7831 Q14004 Q14004 1242 1253 CDK13 Cyclin-dependent kinase 13 yes yes 2 0.0017347 101.89 By MS/MS By matching By MS/MS 1 1 1 11056000 3781500 3572900 3701400 1226 1400 1303 4048;4049;4050 2876;2877 2877 3367 2 ILEQQNSSRTLEK ANWEAQQRILEQQNSS NSSRTLEKNKKKGKIF R I L E K N 0 1 1 0 0 2 2 0 0 1 2 1 0 0 0 2 1 0 0 0 0 0 13 1 1544.8158 G3V1Q4;E7ES33;E7EPK1;Q16181;Q5JXL7 G3V1Q4 381 393 SEPT7;DKFZp586I031 Septin-7 yes no 2;3 0.0035649 70.889 By MS/MS By MS/MS By MS/MS 3 3 3 132810000 50173000 51083000 31550000 1227 525 1304;1305 4051;4052;4053;4054;4055;4056;4057;4058;4059 2878;2879;2880;2881;2882 2882 32 669;670;3055 5 ILEQQNSSRTLEKNK ANWEAQQRILEQQNSS SRTLEKNKKKGKIF__ R I L N K K 0 1 2 0 0 2 2 0 0 1 2 2 0 0 0 2 1 0 0 0 0 0 15 2 1786.9537 G3V1Q4;E7ES33;E7EPK1;Q16181;Q5JXL7 G3V1Q4 381 395 SEPT7;DKFZp586I031 Septin-7 yes no 3 0.013478 57.267 By MS/MS By matching By matching 1 1 1 9756200 3791600 3495500 2469100 1228 525 1306 4060;4061;4062 2883 2883 669;670;3055 1 ILETLKLLMQHTWPR PEEEARLKILETLKLL LMQHTWPRVSCRLVVL K I L P R V 0 1 0 0 0 1 1 0 1 1 4 1 1 0 1 0 2 1 0 0 0 0 15 1 1878.055 E5RIH5;Q6NXR4 E5RIH5 375 389 TTI2 TELO2-interacting protein 2 yes no 2 0.0074996 40.154 By MS/MS 1 665930 0 665930 0 1229 509 1307 4063 2884 2884 35 3045;3046 1 ILFIFIDSDHTDNQR AAESFKGKILFIFIDS SDHTDNQRILEFFGLK K I L Q R I 0 1 1 3 0 1 0 0 1 3 1 0 0 2 0 1 1 0 0 0 0 0 15 0 1832.9057 I3L4M2;I3L398;H0Y3Z3;H7BZ94;P07237 I3L4M2 89 103 P4HB Protein disulfide-isomerase yes no 2;3 5.5588E-09 126.09 By MS/MS By MS/MS By MS/MS 2 2 2 7256500 3373600 2176300 1706600 1230 749 1308 4064;4065;4066;4067;4068;4069 2885;2886;2887;2888 2886 4 ILGDMQPGDYFDLVLFGTR QTKEALLKILGDMQPG DLVLFGTRVQSWKGSL K I L T R V 0 1 0 3 0 1 0 3 0 1 3 0 1 2 1 0 1 0 1 1 0 0 19 0 2156.0612 P19827 P19827 318 336 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes yes 2 6.4469E-13 94.09 By matching By matching By MS/MS 1 1 1 23184000 10227000 7007400 5950200 1231 1178 1309 4070;4071;4072 2889 2889 111 1 ILGSASPEEEQEKPILDRPTR EYAEARKRILGSASPE PILDRPTRISQPEDSR R I L T R I 1 2 0 1 0 1 4 1 0 2 2 1 0 0 3 2 1 0 0 0 0 0 21 2 2364.2285 Q7Z422 Q7Z422 102 122 SZRD1 SUZ domain-containing protein 1 yes yes 3 0.012902 48.314 By MS/MS 1 4857500 4857500 0 0 1232 1580 1310 4073 2890 2890 3441 1 ILITIVEEVETLR VTVEKVIKILITIVEE VEEVETLRQERLSFSG K I L L R Q 0 1 0 0 0 0 3 0 0 3 2 0 0 0 0 0 2 0 0 2 0 0 13 0 1526.892 Q15149 Q15149 3424 3436 PLEC Plectin yes yes 2 6.0166E-13 127.83 By MS/MS By MS/MS 1 1 4053800 0 2349900 1703800 1233 1435 1311 4074;4075 2891;2892 2892 2 ILKSPEIQR MINTDLSRILKSPEIQ LKSPEIQRALRAPRKK R I L Q R A 0 1 0 0 0 1 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1082.6448 H3BM89;P36578 H3BM89 198 206 RPL4 60S ribosomal protein L4 yes no 2;3 0.0059723 92.943 By MS/MS By MS/MS By MS/MS 2 2 2 22797000 10634000 7204200 4959200 1234 814 1312 4076;4077;4078;4079;4080;4081 2893;2894;2895;2896 2895 1102 4 ILLAELEQLK RFLEQQNKILLAELEQ LAELEQLKGQGKSRLG K I L L K G 1 0 0 0 0 1 2 0 0 1 4 1 0 0 0 0 0 0 0 0 0 0 10 0 1168.7067 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0 P08670 130 139 VIM Vimentin yes no 2 0.0036363 88.819 By MS/MS 1 1796500 1796500 0 0 1235 1129 1313 4082 2897 2897 1 ILLAELEQLKGQGK RFLEQQNKILLAELEQ EQLKGQGKSRLGDLYE K I L G K S 1 0 0 0 0 2 2 2 0 1 4 2 0 0 0 0 0 0 0 0 0 0 14 1 1538.9032 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0 P08670 130 143 VIM Vimentin yes no 2;3 0.0013152 81.709 By MS/MS 2 859760 859760 0 0 1236 1129 1314 4083;4084 2898;2899 2898 2 ILLVDSPGMGNADDEQQEEGTSSK KPTHEDSKILLVDSPG QEEGTSSKQVVKQGLQ K I L S K Q 1 0 1 3 0 2 3 3 0 1 2 1 1 0 1 3 1 0 0 1 0 0 24 0 2519.1333 Q9UKN8 Q9UKN8 606 629 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3 0.0036189 51.783 By matching By MS/MS 1 1 6240000 3564100 0 2675900 1237 1917 1315 4085;4086 2900 2900 173 2707 1 ILNNGHAFNVEFDDSQDK YDQATSLRILNNGHAF EFDDSQDKAVLKGGPL R I L D K A 1 0 3 3 0 1 1 1 1 1 1 1 0 2 0 1 0 0 0 1 0 0 18 0 2061.9392 P00918;E5RID5;E5RK37 P00918 59 76 CA2 Carbonic anhydrase 2 yes no 3 0.014701 37.438 By MS/MS By matching By matching 1 1 1 1023300 476190 303860 243270 1238 1082 1316 4087;4088;4089 2901 2901 1 ILQEKLDQPVSAPPSPR DKLEAEKRILQEKLDQ VSAPPSPRDISMEIDS R I L P R D 1 1 0 1 0 2 1 0 0 1 2 1 0 0 4 2 0 0 0 1 0 0 17 1 1874.0262 Q16204 Q16204 230 246 CCDC6 Coiled-coil domain-containing protein 6 yes yes 3 0.0029606 58.914 By MS/MS By MS/MS By MS/MS 2 2 2 5846300 1996300 1759200 2090800 1239 1454 1317;1318 4090;4091;4092;4093;4094;4095 2902;2903;2904 2903 1948;1949 3 ILSEVTPDQSKPEN NRLKSLMKILSEVTPD PDQSKPEN________ K I L E N - 0 0 1 1 0 1 2 0 0 1 1 1 0 0 2 2 1 0 0 1 0 0 14 1 1555.773 O43482 O43482 216 229 OIP5 Protein Mis18-beta yes yes 2 0.015996 53.377 By MS/MS 1 276210 276210 0 0 1240 1011 1319 4096 2905 2905 1346 1 ILSLMGPQSGK TCAQCLSRILSLMGPQ LMGPQSGKSAVSRHSS R I L G K S 0 0 0 0 0 1 0 2 0 1 2 1 1 0 1 2 0 0 0 0 0 0 11 0 1129.6165 Q08E86;K7EQ86;Q14667 Q08E86 402 412 KIAA0100 Protein KIAA0100 yes no 2 0.0056325 59.245 By MS/MS 1 0 0 0 0 1241 949 1320 4097 2906 2906 66 1 ILSQSTDSLNMR ESPLGLRRILSQSTDS STDSLNMRNRTLS___ R I L M R N 0 1 1 1 0 1 0 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 12 0 1363.6766 V9GYF5;V9GYG5;V9GZ14;V9GYM8;Q92974 V9GYF5 162 173 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 2 7.6271E-10 132.14 By MS/MS By matching By MS/MS 2 1 2 17292000 6983900 4515500 5792900 1242 1716 1321;1322 4098;4099;4100;4101;4102 2907;2908;2909 2908 2357 3 ILVPKSPVK DLAKSGIKILVPKSPV LVPKSPVKSRTAVDGF K I L V K S 0 0 0 0 0 0 0 0 0 1 1 2 0 0 2 1 0 0 0 2 0 0 9 1 979.643 Q9Y232 Q9Y232 196 204 CDYL Chromodomain Y-like protein yes yes 2 0.0033738 110.64 By MS/MS By MS/MS By MS/MS 1 1 1 22859000 8170700 7326900 7361000 1243 1950 1323 4103;4104;4105 2910;2911;2912 2910 2782 3 ILYHGYSLLYVQGNER PQCPSGTKILYHGYSL LYVQGNERAHGQDLGT K I L E R A 0 1 1 0 0 1 1 2 1 1 3 0 0 0 0 1 0 0 3 1 0 0 16 0 1923.9843 P02462 P02462 1466 1481 COL4A1 Collagen alpha-1(IV) chain;Arresten yes yes 3 0.0015598 54.7 By MS/MS By MS/MS By matching 1 1 1 1661500 864130 434970 362380 1244 1093 1324 4106;4107;4108 2913;2914 2913 2 IMATPEQVGK RKMPFTEKIMATPEQV ATPEQVGKMKAIVEKL K I M G K M 1 0 0 0 0 1 1 1 0 1 0 1 1 0 1 0 1 0 0 1 0 0 10 0 1072.5587 B1AHC9;P12956 B1AHC9 402 411 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.011923 80.245 By MS/MS By MS/MS 1 2 2498100 0 1244800 1253200 1245 324 1325;1326 4109;4110;4111 2915;2916 2915 2988 2 IMGPNYTPGKK VSTGLKVRIMGPNYTP PNYTPGKKEDLYLKPI R I M K K E 0 0 1 0 0 0 0 2 0 1 0 2 1 0 2 0 1 0 1 0 0 0 11 1 1204.6274 P13639 P13639 429 439 EEF2 Elongation factor 2 yes yes 2 0.0021432 65.295 By MS/MS By matching 1 1 4014200 3161500 0 852690 1246 1154 1327 4112;4113 2917 2917 107 3296 1 IMNGEADAMSLDGGFVYIAGK TTEDCIAKIMNGEADA GFVYIAGKCGLVPVLA K I M G K C 3 0 1 2 0 0 1 4 0 2 1 1 2 1 0 1 0 0 1 1 0 0 21 0 2158.0075 P02787 P02787 400 420 TF Serotransferrin yes yes 2 0.0021459 47.037 By MS/MS By matching By matching 1 1 1 2957200 1287900 646830 1022500 1247 1097 1328 4114;4115;4116 2918 2918 62 82;83 1 IMNVIGEPIDER VGPETLGRIMNVIGEP IGEPIDERGPIKTKQF R I M E R G 0 1 1 1 0 0 2 1 0 3 0 0 1 0 1 0 0 0 0 1 0 0 12 0 1384.7021 P06576;F8W079;H0YH81 P06576 144 155 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 0.015948 51.268 By MS/MS 1 425020 0 425020 0 1248 1112 1329 4117 2919 2919 0 IMSCSPDTQCSR LLKKQVVRIMSCSPDT SPDTQCSRDHSMEDPD R I M S R D 0 1 0 1 2 1 0 0 0 1 0 0 1 0 1 3 1 0 0 0 0 0 12 0 1440.5796 K7EQ12;Q9C0C9 K7EQ12 157 168 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 2 0.0030293 72.29 By matching By matching By MS/MS 1 1 1 1811300 499520 670400 641380 1249 948 1330 4118;4119;4120 2920 2920 1254 1 INCLFLHSPLVEK I N E K 0 0 1 0 1 0 1 0 1 1 3 1 0 1 1 1 0 0 0 1 0 0 13 0 1568.8385 REV__Q8TDW0 yes yes 3 0.0089985 48.899 By MS/MS By matching 2 1 19804000 0 14859000 4945300 + 1250 2009 1331 4121;4122;4123 2921 2921 2861 1 INCRLSYCISSRLQGPGQER INKQLFRKINCRLSYC LQGPGQERAGLCPNYR K I N E R A 0 3 1 0 2 2 1 2 0 2 2 0 0 0 1 3 0 0 1 0 0 0 20 2 2393.1692 Q6AI25 Q6AI25 49 68 DKFZp686G10113 yes yes 3 0.014016 46.159 By MS/MS 1 0 0 0 0 1251 1532 1332 4124 2922 2922 2084 1 INEFSISSFCTVVDVVNFSK NLYLQGNRINEFSISS VDVVNFSKLQVLRLDG R I N S K L 0 0 2 1 1 0 1 0 0 2 0 1 0 3 0 4 1 0 0 4 0 0 20 0 2291.1144 Q06828 Q06828 325 344 FMOD Fibromodulin yes yes 2 1.6021E-13 93.909 By MS/MS By matching By MS/MS 1 1 1 13302000 8835100 2584500 1882600 1252 1349 1333 4125;4126;4127 2923;2924 2923 2 INISEGNCPER MREESGARINISEGNC SEGNCPERIITLAGPT R I N E R I 0 1 2 0 1 0 2 1 0 2 0 0 0 0 1 1 0 0 0 0 0 0 11 0 1287.5877 Q15366;H3BRU6;F8VZX2;F8VTZ0;F8W0G4;F8VXH9;F8W1G6;J3QT27;E9PFP8;P57721;Q15365 Q15366 47 57 PCBP2;PCBP3;PCBP1 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3;Poly(rC)-binding protein 1 no no 2 0.004079 81.525 By matching By MS/MS By matching 1 1 1 2950500 839620 1484500 626290 1253 1438;1437 1334 4128;4129;4130 2925 2925 1 INLLKNIDEK REITDKKKINLLKNID LLKNIDEKLTEAAREL K I N E K L 0 0 2 1 0 0 1 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 10 1 1198.6921 Q9NWY4 Q9NWY4 182 191 C4orf27 UPF0609 protein C4orf27 yes yes 2 0.0069177 78.334 By MS/MS By matching 1 1 953020 574740 378280 0 1254 1871 1335 4131;4132 2926 2926 109 1 INNVIDNLIVAPGTFEVQIEEVR SILSLVTKINNVIDNL EVQIEEVRQVGSYKKG K I N V R Q 1 1 3 1 0 1 3 1 0 4 1 0 0 1 1 0 1 0 0 4 0 0 23 0 2581.3752 X6R6Z1;A0A0A0MRL0;B4DY09;Q12905 X6R6Z1 43 65 ILF2 Interleukin enhancer-binding factor 2 yes no 3 0.00036001 67.563 By MS/MS By MS/MS 1 1 4987100 0 2204000 2783000 1255 134 1336 4133;4134 2927;2928 2927 2 INPPSSGGTSSSPIK NRRQKEKRINPPSSGG GTSSSPIKAIFPSPTS R I N I K A 0 0 1 0 0 0 0 2 0 2 0 1 0 0 3 5 1 0 0 0 0 0 15 0 1427.7256 A0A0C4DG88;P14859;A0A0A0MT46 A0A0C4DG88 345 359 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 2 0.0098177 65.219 By MS/MS By matching By MS/MS 1 1 2 11087000 3505100 4294600 3287000 1256 192 1337 4135;4136;4137;4138 2929;2930;2931 2929 262;2935 3 INSDDSNLYLTASK RRIGDVVRINSDDSNL NLYLTASKKKPTCC__ R I N S K K 1 0 2 2 0 0 0 0 0 1 2 1 0 0 0 3 1 0 1 0 0 0 14 0 1539.7417 C9JY26;Q9BZG1 C9JY26 239 252 RAB34 Ras-related protein Rab-34 yes no 2 0.0015262 72.34 By matching By MS/MS By MS/MS 1 1 1 3516800 1286000 1169800 1061000 1257 457 1338 4139;4140;4141 2932;2933 2932 3653 2 INTQWLLTSGTTEANAWK YVGGAEARINTQWLLT TTEANAWKSTLVGHDT R I N W K S 2 0 2 0 0 1 1 1 0 1 2 1 0 0 0 1 4 2 0 0 0 0 18 0 2033.0218 CON__Streptavidin CON__Streptavidin 105 122 yes yes 2;3 2.5162E-33 134.93 By MS/MS By MS/MS By MS/MS 2 2 2 30260000 15496000 9439500 5324700 + 1258 475 1339 4142;4143;4144;4145;4146;4147 2934;2935;2936 2934 3 INTQWLLTSGTTEANAWKSTLVGHDTFTK YVGGAEARINTQWLLT VGHDTFTKVKPSAASI R I N T K V 2 0 2 1 0 1 1 2 1 1 3 2 0 1 0 2 7 2 0 1 0 0 29 1 3219.62 CON__Streptavidin CON__Streptavidin 105 133 yes yes 4 1.7455E-65 115.58 By MS/MS By MS/MS By MS/MS 1 1 1 39277000 11567000 11316000 16394000 + 1259 475 1340 4148;4149;4150 2937;2938;2939 2939 3 IPLGGLSSMENR CVLESCRRIPLGGLSS GLSSMENRRPLLRKGR R I P N R R 0 1 1 0 0 0 1 2 0 1 2 0 1 0 1 2 0 0 0 0 0 0 12 0 1272.6496 Q8TEV8 Q8TEV8 107 118 SMCR5 Smith-Magenis syndrome chromosomal region candidate gene 5 protein yes yes 3 0.012262 47.894 By matching By MS/MS By matching 1 1 1 1729700 674410 736200 319070 1260 1678 1341 4151;4152;4153 2940 2940 2304 1 IPMPVNFNEPLSMLQR CIGKELSKIPMPVNFN EPLSMLQRLTEDLEYH K I P Q R L 0 1 2 0 0 1 1 0 0 1 2 0 2 1 3 1 0 0 0 1 0 0 16 0 1884.959 P22059;H0YCV6;H7C1R2;H7C368;H7C428;A0A0A0MSB4;Q6ZN50;Q969R2 P22059 434 449 OSBP;OSBP2 Oxysterol-binding protein 1;Oxysterol-binding protein;Oxysterol-binding protein 2 yes no 3 0.015264 46.318 By MS/MS 1 0 0 0 0 1261 1185 1342 4154 2941 2941 1 IPNYQLSPTKLPSINK SNTLAKMRIPNYQLSP TKLPSINKSKDRASQQ R I P N K S 0 0 2 0 0 1 0 0 0 2 2 2 0 0 3 2 1 0 1 0 0 0 16 1 1812.0145 A0A0C4DG07;O60934 A0A0C4DG07 344 359 NBN Nibrin yes no 3 0.001629 66.201 By MS/MS By matching By matching 1 1 1 4558000 1477500 1343700 1736900 1262 184 1343 4155;4156;4157 2942;2943 2942 255 2 IPSEMPSPNFGK DTSLIHGKIPSEMPSP MPSPNFGKNIYRKQSG K I P G K N 0 0 1 0 0 0 1 1 0 1 0 1 1 1 3 2 0 0 0 0 0 0 12 0 1302.6278 Q9H2J7 Q9H2J7 681 692 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.00074854 86.467 By MS/MS By MS/MS By MS/MS 1 1 1 6158600 1904700 2229100 2024700 1263 1817 1344 4158;4159;4160 2944;2945;2946 2946 2547 3 IPSIVSSPLNSPLDR SPLADAKRIPSIVSSP PLNSPLDRSGIDITDF R I P D R S 0 1 1 1 0 0 0 0 0 2 2 0 0 0 3 4 0 0 0 1 0 0 15 0 1593.8726 P49790 P49790 328 342 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.018125 45.614 By matching By MS/MS By matching 1 1 1 1016900 371790 345640 299460 1264 1260 1345 4161;4162;4163 2947 2947 1656;1657 1 IPSPNILK SPNPRSVRIPSPNILK IPSPNILKTGLTENVD R I P L K T 0 0 1 0 0 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 0 0 8 0 880.5382 Q5VUA4 Q5VUA4 2099 2106 ZNF318 Zinc finger protein 318 yes yes 2 0.011129 95.483 By matching By matching By MS/MS 1 1 1 1847600 558470 770090 519040 1265 1520 1346 4164;4165;4166 2948 2948 2059 1 IPVEGPLSPSR GNNPIFPRIPVEGPLS EGPLSPSRGDFPKGIP R I P S R G 0 1 0 0 0 0 1 1 0 1 1 0 0 0 3 2 0 0 0 1 0 0 11 0 1150.6346 O00512 O00512 680 690 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 0.0085284 60.301 By matching By MS/MS By MS/MS 1 1 1 2904300 871690 1095900 936740 1266 977 1347 4167;4168;4169 2949;2950 2949 1290;1291 2 IQAIELEDLLR ELHLDHNKIQAIELED IELEDLLRYSKLYRLG K I Q L R Y 1 1 0 1 0 1 2 0 0 2 3 0 0 0 0 0 0 0 0 0 0 0 11 0 1311.7398 P21810 P21810 241 251 BGN Biglycan yes yes 2 2.1048E-05 121.83 By matching By MS/MS By MS/MS 1 1 1 12646000 6085900 3019600 3540400 1267 1183 1348 4170;4171;4172 2951;2952 2952 2 IQDPTEDAEAEDTPR KKRNHTKRIQDPTEDA AEAEDTPRKRLRTDKH R I Q P R K 2 1 0 3 0 1 3 0 0 1 0 0 0 0 2 0 2 0 0 0 0 0 15 0 1685.738 O96028;H0Y9L4 O96028 532 546 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2 0.0045442 78.326 By matching By matching By MS/MS 1 1 1 2992000 936040 1168200 887830 1268 1076 1349 4173;4174;4175 2953 2953 3270 1 IQELGDLYTPAPGR IRSEQRPRIQELGDLY LYTPAPGRAESGPEKP R I Q G R A 1 1 0 1 0 1 1 2 0 1 2 0 0 0 2 0 1 0 1 0 0 0 14 0 1528.7886 M0R2P8;M0R3A4;M0QYA2;Q9NWS0 M0R2P8 68 81 PIH1D1 PIH1 domain-containing protein 1 yes no 2 0.0030781 80.979 By MS/MS By matching 1 1 779860 397970 381880 0 1269 960 1350 4176;4177 2954 2954 3229 1 IQEQESSGEEDSDLSPEER EGLEPKYRIQEQESSG SDLSPEEREKKRQFEM R I Q E R E 0 1 0 2 0 2 6 1 0 1 1 0 0 0 1 4 0 0 0 0 0 0 19 0 2162.9087 E7EMN6;G1AUC5;Q6NXS1;P41236 E7EMN6 90 108 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 yes no 2 7.0881E-07 76.01 By matching By MS/MS By matching 1 2 1 1574800 475500 606070 493190 1270 520 1351;1352 4178;4179;4180;4181 2955;2956 2956 658;659 2 IQIISTDSAVASPQR ________________ SAVASPQRIQGSEPAS R I Q Q R I 2 1 0 1 0 2 0 0 0 3 0 0 0 0 1 3 1 0 0 1 0 0 15 0 1584.8471 C9JKS0;P49116;C9J2Y1;C9JMI6 C9JKS0 8 22 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.0025287 65.043 By MS/MS By MS/MS By MS/MS 1 2 2 4789000 1402400 1900700 1485800 1271 439 1353;1354 4182;4183;4184;4185;4186 2957;2958;2959 2958 577;578;3025 2 IQLVEEELDR ________________ LVEEELDRAQERLATA R I Q D R A 0 1 0 1 0 1 3 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 10 0 1242.6456 H0YL80;D6R904;K7EP68;H0YKX5;H0YKP3;K7ERG3;K7ENT6;H0YNC7;A0A087WWU8;Q5HYB6;F5H7S3;H7BYY1;H0YK48;H0YL52;B7Z596;Q5TCU3;CON__Q3SX28;J3KN67;Q5TCU8;Q6ZN40;P67936;P09493;P07951;P06753 H0YL80 5 14 TPM1;TPM3;TPM4;DKFZp686J1372;TPM2 Tropomyosin alpha-4 chain;Tropomyosin alpha-1 chain;Tropomyosin beta chain;Tropomyosin alpha-3 chain yes no 2 0.0076585 71.501 By matching By MS/MS By matching 1 1 1 1021100 392650 329980 298510 + 1272 67 1355 4187;4188;4189 2960 2960 1 IQQFDDGGSDEEDIWEEK FEACCKERIQQFDDGG EEDIWEEKHIAFTPES R I Q E K H 0 0 0 4 0 2 4 2 0 2 0 1 0 1 0 1 0 1 0 0 0 0 18 0 2138.8916 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7 H0YEN2 316 333 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 3 0.0034853 51.487 By MS/MS 1 1423900 1423900 0 0 1273 599 1356 4190 2961 2961 807 1 IQQQFSDLKR KYRMERPKIQQQFSDL QQFSDLKRKLAEVTEE K I Q K R K 0 1 0 1 0 3 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 10 1 1261.6779 O94906 O94906 138 147 PRPF6 Pre-mRNA-processing factor 6 yes yes 2 0.011359 65.5 By matching By MS/MS By matching 1 1 1 5262000 1817300 1795900 1648800 1274 1056 1357 4191;4192;4193 2962 2962 1419 1 IREEYPDR MGTLLISKIREEYPDR IREEYPDRIMNTFSVV K I R D R I 0 2 0 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 8 1 1076.5251 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A075B736;Q5SQY0;CON__ENSEMBL:ENSBTAP00000025008;A6NNZ2;Q9H4B7;P68371;Q3ZCM7 Q5JP53 137 144 TUBB;TUBB2B;TUBB2A;TUBB8;TUBB1;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-8 chain no no 3 0.0073732 74.165 By matching By MS/MS 1 1 1321600 620860 700780 0 1275 1118;1319 1358 4194;4195 2963 2963 1 IRTMNEVITGIR TATFTDARIRTMNEVI NEVITGIRIIKMYAWE R I R I R I 0 2 1 0 0 0 1 1 0 3 0 0 1 0 0 0 2 0 0 1 0 0 12 1 1401.7762 O15439 O15439 273 284 ABCC4 Multidrug resistance-associated protein 4 yes yes 3 0.01511 42.243 By MS/MS 1 0 0 0 0 1276 996 1359 4196 2964 2964 3238;3239 1 ISEDESSGLVYK LSDKHLGKISEDESSG ESSGLVYKSGSGEIGS K I S Y K S 0 0 0 1 0 0 2 1 0 1 1 1 0 0 0 3 0 0 1 1 0 0 12 0 1325.6351 A0A0C4DGH6;A0JNW5 A0A0C4DGH6 625 636 UHRF1BP1L UHRF1-binding protein 1-like yes no 2 0.018793 43.635 By MS/MS By matching By matching 1 1 1 1924700 616670 660890 647150 1277 200 1360 4197;4198;4199 2965 2965 278;279 0 ISEGLPTPTK SPLKSPYKISEGLPTP EGLPTPTKMTPRSRIL K I S T K M 0 0 0 0 0 0 1 1 0 1 1 1 0 0 2 1 2 0 0 0 0 0 10 0 1041.5706 P06400 P06400 815 824 RB1 Retinoblastoma-associated protein yes yes 2 0.00043324 117.09 By MS/MS By matching 1 1 845370 690490 0 154880 1278 1111 1361 4200;4201 2966 2966 3276 1 ISEQFTAMFR AIQELFKRISEQFTAM EQFTAMFRRKAFLHWY R I S F R R 1 1 0 0 0 1 1 0 0 1 0 0 1 2 0 1 1 0 0 0 0 0 10 0 1228.591 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A0B4J269;Q13509;P68371;P04350 Q5JP53 363 372 TUBB;TUBB2B;TUBB2A;TUBB3;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 2 0.0022788 77.318 By MS/MS By MS/MS 1 1 341470 0 341470 0 1279 1118;1319 1362 4202;4203 2967;2968 2968 90 1 ISFVEEDVHPK PQRLKETRISFVEEDV VEEDVHPKWIPGAADD R I S P K W 0 0 0 1 0 0 2 0 1 1 0 1 0 1 1 1 0 0 0 2 0 0 11 0 1298.6507 Q8WYP5 Q8WYP5 1231 1241 AHCTF1 Protein ELYS yes yes 2 0.015744 54.005 By matching By matching By MS/MS 1 1 1 2487300 964220 788990 734070 1280 1691 1363 4204;4205;4206 2969 2969 2316 1 ISGLIYEETR ARRGGVKRISGLIYEE GLIYEETRGVLKVFLE R I S T R G 0 1 0 0 0 0 2 1 0 2 1 0 0 0 0 1 1 0 1 0 0 0 10 0 1179.6136 P62805 P62805 47 56 HIST1H4A Histone H4 yes yes 2 0.0024669 98.033 By MS/MS By MS/MS By MS/MS 1 1 1 14611000 4372300 8417200 1821200 1281 1313 1364 4207;4208;4209 2970;2971;2972 2971 3 ISLSKSPTK KLAKPMEKISLSKSPT SLSKSPTKTDPKNEEE K I S T K T 0 0 0 0 0 0 0 0 0 1 1 2 0 0 1 3 1 0 0 0 0 0 9 1 959.56515 A0A0A0MRN4;Q5BKZ1 A0A0A0MRN4 176 184 ZNF326 DBIRD complex subunit ZNF326 yes no 2 0.0059845 85.973 By matching By MS/MS By matching 1 1 1 15115000 4698500 6199000 4217500 1282 138 1365 4210;4211;4212 2973 2973 186 1 ISLSKSPTKTDPK KLAKPMEKISLSKSPT SPTKTDPKNEEEEKRR K I S P K N 0 0 0 1 0 0 0 0 0 1 1 3 0 0 2 3 2 0 0 0 0 0 13 2 1400.7875 A0A0A0MRN4;Q5BKZ1 A0A0A0MRN4 176 188 ZNF326 DBIRD complex subunit ZNF326 yes no 2 0.00017592 88.78 By matching By matching By MS/MS 1 1 1 12024000 4718000 4688800 2617700 1283 138 1366 4213;4214;4215 2974 2974 186 1 ISNIPDEYFK TLYLDNNKISNIPDEY NIPDEYFKRFNALQYL K I S F K R 0 0 1 1 0 0 1 0 0 2 0 1 0 1 1 1 0 0 1 0 0 0 10 0 1224.6027 P51884;CON__Q05443 P51884 217 226 LUM Lumican yes no 2 0.014441 64.04 By MS/MS By matching By matching 1 1 1 1810800 1073500 397950 339350 1284 1280 1367 4216;4217;4218 2975 2975 1 ISNYGWDQSDK ITTGYTVKISNYGWDQ YGWDQSDKFVKIYITL K I S D K F 0 0 1 2 0 1 0 1 0 1 0 1 0 0 0 2 0 1 1 0 0 0 11 0 1311.5731 Q9HB71 Q9HB71 75 85 CACYBP Calcyclin-binding protein yes yes 2 0.002355 87.258 By matching By MS/MS By MS/MS 1 1 1 1124100 219620 664250 240210 1285 1837 1368 4219;4220;4221 2976;2977 2976 2 ISSKSPGHMVILDQTK KKSEEKKRISSKSPGH MVILDQTKGDHCRPSR R I S T K G 0 0 0 1 0 1 0 1 1 2 1 2 1 0 1 3 1 0 0 1 0 0 16 1 1739.924 Q9NWH9 Q9NWH9 549 564 SLTM SAFB-like transcription modulator yes yes 3 0.00059309 81.448 By MS/MS By MS/MS By MS/MS 2 2 2 10485000 4422700 3235100 2827400 1286 1868 1369;1370 4222;4223;4224;4225;4226;4227 2978;2979;2980;2981;2982 2978 171 2637;2638;2639 5 ISSTPTTETIR KSTRRSGRISSTPTTE TPTTETIRGIDSDDVQ R I S I R G 0 1 0 0 0 0 1 0 0 2 0 0 0 0 1 2 4 0 0 0 0 0 11 0 1204.6299 A0A075B754;Q96QE3 A0A075B754 600 610 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.0013504 97.163 By matching By MS/MS By MS/MS 1 2 2 5454900 1687100 2122000 1645700 1287 12 1371 4228;4229;4230;4231;4232 2983;2984;2985 2983 9 3 ISTASQVSQGTGSPVPK STGSPTNKISTASQVS GTGSPVPKIHGSSFVT K I S P K I 1 0 0 0 0 2 0 2 0 1 0 1 0 0 2 4 2 0 0 2 0 0 17 0 1642.8526 Q9ULM3 Q9ULM3 524 540 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0001802 82.121 By matching By matching By MS/MS 1 1 1 6349800 2304800 2131200 1913800 1288 1930 1372 4233;4234;4235 2986 2986 2724 1 ISYIPDEEVSSPSPPQR QFENYSFKISYIPDEE SSPSPPQRAQRGDHSS K I S Q R A 0 1 0 1 0 1 2 0 0 2 0 0 0 0 4 4 0 0 1 1 0 0 17 0 1899.9214 F8W930;Q9Y6M1 F8W930 158 174 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 yes no 2 0.0015743 61.732 By MS/MS By MS/MS By matching 1 1 1 4569400 1504300 1703200 1361900 1289 691 1373 4236;4237;4238 2987;2988 2987 922 2 ITEGVPQLLIVLTADR LVSSAGSRITEGVPQL LIVLTADRSGDDVRNP R I T D R S 1 1 0 1 0 1 1 1 0 2 3 0 0 0 1 0 2 0 0 2 0 0 16 0 1737.0036 E7ENL6;P12111 E7ENL6 521 536 COL6A3 Collagen alpha-3(VI) chain yes no 2;3 1.4226E-18 117.03 By MS/MS By MS/MS By MS/MS 1 1 2 13084000 6426700 3163300 3494000 1290 522 1374 4239;4240;4241;4242 2989;2990;2991;2992 2989 4 ITFELVYEELLK VSVAPNAKITFELVYE LVYEELLKRRLGVYEL K I T L K R 0 0 0 0 0 0 3 0 0 1 3 1 0 1 0 0 1 0 1 1 0 0 12 0 1495.8174 H7C0L5;B7ZKJ8;Q14624 H7C0L5 10 21 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 yes no 2 2.0327E-50 162.36 By MS/MS By MS/MS By MS/MS 1 1 1 7178600 3474200 1844200 1860100 1291 382 1375 4243;4244;4245 2993;2994;2995 2994 3 ITPPAAKPGSPQAK SMVQKSPRITPPAAKP KPGSPQAKSLQPAVAE R I T A K S 3 0 0 0 0 1 0 1 0 1 0 2 0 0 4 1 1 0 0 0 0 0 14 1 1361.7667 P35658;A0A0A0MSW3 P35658 669 682 NUP214 Nuclear pore complex protein Nup214 yes no 2 7.2994E-13 124.16 By MS/MS By MS/MS By MS/MS 1 1 1 8958600 3064600 3950600 1943400 1292 1223 1376 4246;4247;4248 2996;2997;2998 2996 1579 3 ITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNR SGVWFAKKITQDYGQD AFTHSTNRMWRKTRSH K I T N R M 4 1 2 5 0 2 1 2 1 4 3 0 0 4 1 1 6 0 1 1 0 0 39 0 4330.107 C9JUZ4;C9JUF9;P15085;S4R433 C9JUZ4 108 146 CPA1 Carboxypeptidase A1 yes no 3 0.011082 37.357 By matching By MS/MS 1 1 68933000 0 17194000 51739000 1293 449 1377 4249;4250 2999 2999 1 ITQLEQEKSALIK EVTEKSERITQLEQEK QEKSALIKQLFEARAL R I T I K Q 1 0 0 0 0 2 2 0 0 2 2 2 0 0 0 1 1 0 0 0 0 0 13 1 1499.8559 Q86UD0 Q86UD0 361 373 SAPCD2 Suppressor APC domain-containing protein 2 yes yes 2 0.012645 45.972 By MS/MS By matching By matching 1 1 1 1062400 701580 189900 170920 1294 1593 1378 4251;4252;4253 3000 3000 2175;3445 1 ITRKPVTVSPTTPTSPTEGEAS DVHAELDRITRKPVTV SPTEGEAS________ R I T A S - 1 1 0 0 0 0 2 1 0 1 0 1 0 0 4 3 6 0 0 2 0 0 22 2 2255.1645 E9PHI6;Q9Y6G9 E9PHI6 386 407 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 0.0039778 56.424 By MS/MS By matching By matching 1 1 1 2819100 1042100 977850 799140 1295 584 1379 4254;4255;4256 3001 3001 772;773;3087;3088;3089;3090 1 ITSPLMEPSSIEK VCLAVEKRITSPLMEP MEPSSIEKIVEIDAHI R I T E K I 0 0 0 0 0 0 2 0 0 2 1 1 1 0 2 3 1 0 0 0 0 0 13 0 1430.7327 P28066 P28066 54 66 PSMA5 Proteasome subunit alpha type-5 yes yes 2 0.016471 68.786 By matching By MS/MS By matching 1 1 1 4611500 1828200 1473100 1310300 1296 1199 1380 4257;4258;4259 3002 3002 1550 1 ITVQASPNLDK LPSDFQHKITVQASPN QASPNLDKRRSLNSSS K I T D K R 1 0 1 1 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 11 0 1184.6401 Q5TCX8 Q5TCX8 523 533 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 yes yes 2 0.007742 61.48 By matching By matching By MS/MS 1 1 1 1540900 645990 575860 319060 1297 1512 1381 4260;4261;4262 3003 3003 2044 1 ITVTSEVPFSK TIERSKSKITVTSEVP TSEVPFSK________ K I T S K - 0 0 0 0 0 0 1 0 0 1 0 1 0 1 1 2 2 0 0 2 0 0 11 0 1206.6496 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;P35268 K7EJT5 37 47 RPL22 60S ribosomal protein L22 yes no 2 0.0038453 78.939 By MS/MS 1 332520 0 332520 0 1298 935 1382 4263 3004 3004 1 ITYYHLSFPTNIQAPAVVFR ECSKLPLRITYYHLSF QAPAVVFRMGPSSAVP R I T F R M 2 1 1 0 0 1 0 0 1 2 1 0 0 2 2 1 2 0 2 2 0 0 20 0 2336.2317 B1AHL2 B1AHL2 624 643 FBLN1 Fibulin-1 yes yes 3 0.009051 40.186 By MS/MS By matching 1 1 2217100 1391600 0 825530 1299 325 1383 4264;4265 3005 3005 1 IVADKDYSVTANSK SLFLQTPKIVADKDYS YSVTANSKIVVVTAGV K I V S K I 2 0 1 2 0 0 0 0 0 1 0 2 0 0 0 2 1 0 1 2 0 0 14 1 1509.7675 P07195;A8MW50;F5H793;C9J7H8 P07195 78 91 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 2;3 0.00070192 85.163 By MS/MS By MS/MS By matching 1 2 1 3785400 905750 2308900 570730 1300 1115 1384 4266;4267;4268;4269 3006;3007;3008 3007 3 IVAHAVEVPAVQSPR RKPIVLKRIVAHAVEV VPAVQSPRRSPRISFF R I V P R R 3 1 0 0 0 1 1 0 1 1 0 0 0 0 2 1 0 0 0 4 0 0 15 0 1571.8784 B5MBX0;Q96FF9;H0YCL8 B5MBX0 63 77 CDCA5 Sororin yes no 2;3 5.6746E-09 104.41 By MS/MS By MS/MS By MS/MS 2 2 2 10771000 3889000 3519800 3362300 1301 359 1385 4270;4271;4272;4273;4274;4275 3009;3010;3011;3012;3013;3014 3013 490 5 IVEISYYNMNRIR PRMFSLQKIVEISYYN YYNMNRIRLQWSRIWH K I V I R L 0 2 2 0 0 0 1 0 0 3 0 0 1 0 0 1 0 0 2 1 0 0 13 1 1669.861 Q9Y6D5 Q9Y6D5 1116 1128 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes yes 2 0.015925 44.309 By MS/MS 1 0 0 0 0 1302 1978 1386 4276 3015 3015 3940 1 IVEPEVVGESDSEVEGDAWR ERLARHRKIVEPEVVG EVEGDAWRMEREDSSE K I V W R M 1 1 0 2 0 0 5 2 0 1 0 0 0 0 1 2 0 1 0 4 0 0 20 0 2201.0124 P55081 P55081 107 126 MFAP1 Microfibrillar-associated protein 1 yes yes 2 9.4657E-13 90.422 By MS/MS By MS/MS By matching 1 1 1 12865000 5536000 4586800 2742300 1303 1296 1387 4277;4278;4279 3016;3017 3016 1708 2 IVEVFDIGPK TVRSFISRIVEVFDIG EVFDIGPKRVQIALAQ R I V P K R 0 0 0 1 0 0 1 1 0 2 0 1 0 1 1 0 0 0 0 2 0 0 10 0 1115.6227 D6RGG3;Q99715;A0A087X0A8 D6RGG3 1225 1234 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.014441 64.04 By MS/MS By matching 2 1 946960 817480 129480 0 1304 497 1388 4280;4281;4282 3018 3018 1 IVEYSPPSAPR ALPEPKVRIVEYSPPS YSPPSAPRRPPVYYKF R I V P R R 1 1 0 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 1 0 0 11 0 1214.6295 O95696 O95696 124 134 BRD1 Bromodomain-containing protein 1 yes yes 2 0.00073183 103.44 By MS/MS By matching By MS/MS 1 1 1 3750500 1576900 1123800 1049900 1305 1072 1389 4283;4284;4285 3019;3020;3021;3022 3020 1440 4 IVNHWASPELR STFRQNPRIVNHWASP HWASPELRQNPGVKNE R I V L R Q 1 1 1 0 0 0 1 0 1 1 1 0 0 0 1 1 0 1 0 1 0 0 11 0 1320.6939 F1T0I1;J3KNL6;O15027 F1T0I1 308 318 SEC16A Protein transport protein Sec16A yes no 2 0.0073935 62.528 By matching By MS/MS By matching 1 1 1 1794300 771520 545960 476850 1306 621 1390 4286;4287;4288 3023 3023 841 1 IVNREKLSESVLMK TCQKVAIKIVNREKLS LSESVLMKVEREIAIL K I V M K V 0 1 1 0 0 0 2 0 0 1 2 2 1 0 0 2 0 0 0 2 0 0 14 2 1644.9233 Q8IWQ3;Q8TDC3;K7EN26 Q8IWQ3 49 62 BRSK2;BRSK1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 yes no 2 0.0047494 50.108 By matching By MS/MS 1 1 888490 0 452220 436270 1307 1611 1391 4289;4290 3024 3024 153 2206;2207 1 IVPQSQVPNPESPGK QPIASSCKIVPQSQVP PNPESPGKSFQPITMS K I V G K S 0 0 1 0 0 2 1 1 0 1 0 1 0 0 4 2 0 0 0 2 0 0 15 0 1575.8257 Q9ULM3 Q9ULM3 436 450 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0036939 59.862 By MS/MS By MS/MS By matching 1 1 1 3600500 1238500 1369100 992810 1308 1930 1392 4291;4292;4293 3025;3026;3027 3026 2725 3 IVRGDQPAASGDSDDDEPPPLPR LCIFLLYKIVRGDQPA DEPPPLPRLKRRDFTP K I V P R L 2 2 0 5 0 1 1 2 0 1 1 0 0 0 5 2 0 0 0 1 0 0 23 1 2403.1302 O00264 O00264 45 67 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3 2.1714E-17 91.964 By MS/MS By MS/MS By MS/MS 1 1 1 16016000 6821800 5819400 3374300 1309 972 1393 4294;4295;4296 3028;3029;3030;3031;3032 3028 1284;1285 5 IVSGSPISTPSPSPLPR QPITMSCKIVSGSPIS PSPSPLPRTPTSTPVH K I V P R T 0 1 0 0 0 0 0 1 0 2 1 0 0 0 5 5 1 0 0 1 0 0 17 0 1690.9254 Q9ULM3 Q9ULM3 461 477 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.014338 45.33 By matching By matching By MS/MS 1 1 1 1025500 418840 316070 290640 1310 1930 1394 4297;4298;4299 3033 3033 2726;2727;3533 1 IVVVTAGVR YSVTANSKIVVVTAGV VVVTAGVRQQEGESRL K I V V R Q 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 4 0 0 9 0 912.57565 P07195;A8MW50;F5H793;C9J7H8 P07195 92 100 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 2 0.0063454 83.206 By MS/MS By MS/MS 1 1 2214200 495540 1718600 0 1311 1115 1395 4300;4301 3034;3035 3035 2 IWEERVSLTK EFQHKLVRIWEERVSL EERVSLTKLREKVTRE R I W T K L 0 1 0 0 0 0 2 0 0 1 1 1 0 0 0 1 1 1 0 1 0 0 10 1 1259.6874 Q96DD0 Q96DD0 42 51 LRRC39 Leucine-rich repeat-containing protein 39 yes yes 3 0.0061906 64.945 By matching By matching By MS/MS 1 1 1 6369300 2331800 1938500 2099000 1312 1727 1396 4302;4303;4304 3036 3036 2369 1 IWHHTFYNELR TNWDDMEKIWHHTFYN HTFYNELRVAPEEHPV K I W L R V 0 1 1 0 0 0 1 0 2 1 1 0 0 1 0 0 1 1 1 0 0 0 11 0 1514.7419 P63261;P60709;P68133;P68032;I3L3I0;I3L1U9;A6NL76;Q6S8J3;C9JUM1;C9JZR7;G5E9R0;K7EM38;E7EVS6;I3L3R2;J3KT65;I3L4N8;A5A3E0;Q9BYX7;P0CG39;P0CG38 P63261 85 95 ACTG1;ACTB;ACTA1;ACTC1;POTEE;POTEF;POTEKP;POTEJ;POTEI Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J;POTE ankyrin domain family member I yes no 3 0.00076927 84.198 By MS/MS By MS/MS By MS/MS 1 1 1 6289100 2990900 1952100 1346100 1313 1305 1397 4305;4306;4307 3037;3038;3039 3037 3 IWSPTIGR GQTYNPWRIWSPTIGR IWSPTIGRRSSDPWSN R I W G R R 0 1 0 0 0 0 0 1 0 2 0 0 0 0 1 1 1 1 0 0 0 0 8 0 928.51305 Q92545 Q92545 1861 1868 TMEM131 Transmembrane protein 131 yes yes 2 0.011807 78.264 By MS/MS By matching 1 1 1472300 825200 0 647080 1314 1695 1398 4308;4309 3040 3040 2325 1 IYEDGDDDMKR GLMNVLKKIYEDGDDD DGDDDMKRTINKAWVE K I Y K R T 0 1 0 4 0 0 1 1 0 1 0 1 1 0 0 0 0 0 1 0 0 0 11 1 1355.5663 Q9HB71 Q9HB71 198 208 CACYBP Calcyclin-binding protein yes yes 2 0.011788 55.064 By MS/MS 1 0 0 0 0 1315 1837 1399 4310 3041 3041 3913 1 IYEDHDATQQLQGFYSQVAK ENNGRAQRIYEDHDAT GFYSQVAKPLLVDVDL R I Y A K P 2 0 0 2 0 4 1 1 1 1 1 1 0 1 0 1 1 0 2 1 0 0 20 0 2340.1022 P19827;H7C0N0 P19827 458 477 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 3 0.015339 28.412 By MS/MS 1 412080 412080 0 0 1316 1178 1400 4311 3042 3042 1 IYERPSTTCSKPQR NPSAPLRRIYERPSTT TTCSKPQRVKQNSESE R I Y Q R V 0 2 0 0 1 1 1 0 0 1 0 1 0 0 2 2 2 0 1 0 0 0 14 2 1721.8519 Q9BVA0 Q9BVA0 336 349 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 yes yes 3 0.0070289 52.576 By MS/MS 1 638070 0 0 638070 1317 1784 1401 4312 3043 3043 3906 1 IYESIEEAK ARLADKNKIYESIEEA YESIEEAKSEAMKEME K I Y A K S 1 0 0 0 0 0 3 0 0 2 0 1 0 0 0 1 0 0 1 0 0 0 9 0 1080.5339 Q14DU5;E9PF63;O75116 Q14DU5 36 44 ROCK2 Rho-associated protein kinase 2 yes no 2 0.0032766 95.815 By MS/MS By MS/MS By MS/MS 1 1 1 2774400 955050 976820 842500 1318 573 1402 4313;4314;4315 3044;3045;3046 3046 3674 3 IYHLPDAESDEDEDFKEQTR EIEEHNIKIYHLPDAE EDFKEQTRLLKASIPF K I Y T R L 1 1 0 4 0 1 4 0 1 1 1 1 0 1 1 1 1 0 1 0 0 0 20 1 2436.0717 B5MCX3;Q15019;H7C2Y0 B5MCX3 170 189 SEPT2 Septin-2 yes no 3;4 2.3253E-08 86.222 By MS/MS By MS/MS By MS/MS 1 2 1 340300000 144100000 103820000 92382000 1319 365 1403 4316;4317;4318;4319 3047;3048;3049;3050;3051 3047 492 5 IYIDCYEIIEK VVTSKSVKIYIDCYEI DCYEIIEKDIKEAGNI K I Y E K D 0 0 0 1 1 0 2 0 0 4 0 1 0 0 0 0 0 0 2 0 0 0 11 0 1457.7112 D6RGG3;Q99715;A0A087X0A8;H0Y5N9 D6RGG3 2662 2672 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0048002 73.985 By MS/MS By MS/MS 1 1 1603000 975910 627110 0 1320 497 1404 4320;4321 3052;3053 3053 2 IYLSDSLTGKFYNIGDQR LCNSLRYKIYLSDSLT FYNIGDQRGHGEDHCQ K I Y Q R G 0 1 1 2 0 1 0 2 0 2 2 1 0 1 0 2 1 0 2 0 0 0 18 1 2089.048 H0Y897;D3YTG3;Q7Z7G0 H0Y897 1045 1062 ABI3BP Target of Nesh-SH3 yes no 2 0.0021974 63.473 By MS/MS By matching By MS/MS 1 1 1 198440000 176720000 14422000 7297200 1321 477 1405 4322;4323;4324 3054;3055 3054 27 619;3032 2 IYNISGNGSPLADSK RTPAAGERIYNISGNG GSPLADSKEIFLTVPV R I Y S K E 1 0 2 1 0 0 0 2 0 2 1 1 0 0 1 3 0 0 1 0 0 0 15 0 1534.7627 Q53HL2 Q53HL2 211 225 CDCA8 Borealin yes yes 2 0.002432 70.685 By matching By MS/MS By MS/MS 2 2 2 8839200 3010500 2733000 3095700 1322 1480 1406;1407 4325;4326;4327;4328;4329;4330 3056;3057 3056 90 1987;1988 2 IYQYIQSR SSCQLGQRIYQYIQSR IYQYIQSRFYRSPEVL R I Y S R F 0 1 0 0 0 2 0 0 0 2 0 0 0 0 0 1 0 0 2 0 0 0 8 0 1069.5556 Q9Y463;Q13627 Q9Y463 270 277 DYRK1B;DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1B;Dual specificity tyrosine-phosphorylation-regulated kinase 1A yes no 2 0.015485 86.833 By MS/MS By matching By matching 1 1 1 19529000 7276000 6678700 5573800 1323 1399 1408 4331;4332;4333 3058 3058 3836 1 IYSYVVSRPQPR QVNTADHRIYSYVVSR VVSRPQPRGLLGWGYY R I Y P R G 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 2 0 0 2 2 0 0 12 1 1463.7885 Q96CS3 Q96CS3 78 89 FAF2 FAS-associated factor 2 yes yes 3 0.0087657 57.149 By MS/MS 1 535900 0 535900 0 1324 1725 1409 4334 3059 3059 3891 1 IYVDDGLISLQVK KVVEVGSKIYVDDGLI GLISLQVKQKGADFLV K I Y V K Q 0 0 0 2 0 1 0 1 0 2 2 1 0 0 0 1 0 0 1 2 0 0 13 0 1461.8079 B4DNK4;P14618;H3BTN5;H3BQ34 B4DNK4 100 112 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 7.7271E-08 109.42 By MS/MS By MS/MS By MS/MS 1 1 1 4296000 1789000 1121600 1385400 1325 345 1410 4335;4336;4337 3060;3061;3062 3062 3 KAASPSPQSVR TPEPKKIKKAASPSPQ SPSPQSVRRVSSSRSV K K A V R R 2 1 0 0 0 1 0 0 0 0 0 1 0 0 2 3 0 0 0 1 0 0 11 1 1126.6095 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 744 754 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0012032 92.906 By matching By MS/MS By MS/MS 1 1 1 11555000 2848600 4219300 4487400 1326 322 1411 4338;4339;4340 3063;3064 3063 428 2 KADIVFLLDGSINFR PPSRPEKKKADIVFLL LDGSINFRRDSFQEVL K K A F R R 1 1 1 2 0 0 0 1 0 2 2 1 0 2 0 1 0 0 0 1 0 0 15 1 1706.9356 E7ENL6;P12111 E7ENL6 1030 1044 COL6A3 Collagen alpha-3(VI) chain yes no 3 1.2415E-29 140.49 By MS/MS By MS/MS By MS/MS 1 1 1 9521200 5760300 1946000 1814800 1327 522 1412 4341;4342;4343 3065;3066;3067 3065 3 KAEDSDSEPEPEDNVR SPLGGIKRKAEDSDSE PEPEDNVRLWEAGWKQ R K A V R L 1 1 1 3 0 0 4 0 0 0 0 1 0 0 2 2 0 0 0 1 0 0 16 1 1815.7759 Q9H0D6 Q9H0D6 495 510 XRN2 5-3 exoribonuclease 2 yes yes 2;3 1.5224E-08 99.413 By MS/MS By MS/MS By MS/MS 2 2 2 26297000 8440200 10052000 7805100 1328 1810 1413 4344;4345;4346;4347;4348;4349 3068;3069;3070;3071;3072;3073;3074 3069 2525;2526 7 KAEGEPQEESPLK GSQEKQTKKAEGEPQE PQEESPLKSKSQEEPK K K A L K S 1 0 0 0 0 1 4 1 0 0 1 2 0 0 2 1 0 0 0 0 0 0 13 1 1440.7096 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09;E9PJA7 E9PK91 168 180 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 8.7863E-193 199.33 By MS/MS By MS/MS By MS/MS 1 1 1 37451000 11403000 18384000 7665100 1329 596 1414 4350;4351;4352 3075;3076;3077 3077 791 3 KAEGEPQEESPLKSK GSQEKQTKKAEGEPQE EESPLKSKSQEEPKDT K K A S K S 1 0 0 0 0 1 4 1 0 0 1 3 0 0 2 2 0 0 0 0 0 0 15 2 1655.8366 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09;E9PJA7 E9PK91 168 182 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 1.3105E-45 151.28 By MS/MS By MS/MS By MS/MS 2 2 2 137190000 54236000 44062000 38891000 1330 596 1415 4353;4354;4355;4356;4357;4358 3078;3079;3080;3081;3082 3078 791 5 KAEPSEVDMNSPK PKAKQVKKKAEPSEVD EVDMNSPKSKKAKKKE K K A P K S 1 0 1 1 0 0 2 0 0 0 0 2 1 0 2 2 0 0 0 1 0 0 13 1 1430.6711 Q9NR30 Q9NR30 61 73 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.0021764 70.134 By MS/MS By matching By MS/MS 2 2 2 14327000 4633200 5234700 4458900 1331 1850 1416;1417 4359;4360;4361;4362;4363;4364 3083;3084;3085;3086 3084 167 2600 4 KAEQGSEEEGEGEEEEEEGGESKADDPYAHLSK KQGKEKAKKAEQGSEE DPYAHLSKKEKKKLKK K K A S K K 3 0 0 2 0 1 12 5 1 0 1 3 0 0 1 3 0 0 1 0 0 0 33 2 3578.4928 Q5STZ8;Q8NE71 Q5STZ8 224 256 ABCF1 ATP-binding cassette sub-family F member 1 yes no 4 9.4083E-12 62.787 By MS/MS By matching By MS/MS 1 1 1 17986000 6423500 8557700 3005300 1332 1497 1418 4365;4366;4367 3087;3088;3089 3088 2016 3 KALVVPEPEPDSDSNQER LGDLLTERKALVVPEP DSDSNQERKDD_____ R K A E R K 1 1 1 2 0 1 3 0 0 0 1 1 0 0 3 2 0 0 0 2 0 0 18 1 2008.9702 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 125 142 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 3 0.017673 47.392 By matching By MS/MS By matching 1 1 1 3859400 1339800 1424800 1094800 1333 399 1419 4368;4369;4370 3090 3090 532;533 1 KAPAGQEEPGTPPSSPLSAEQLDR HLQAIPAKKAPAGQEE LSAEQLDRIQRNKAAA K K A D R I 3 1 0 1 0 2 3 2 0 0 2 1 0 0 5 3 1 0 0 0 0 0 24 1 2461.2085 Q68DM5;F5GYA2;P13051 Q68DM5 41 64 DKFZp781L1143;UNG Uracil-DNA glycosylase yes no 3 9.6047E-05 66.432 By MS/MS 1 5370000 5370000 0 0 1334 639 1420 4371 3091 3091 857;3109 1 KAPTNEFYA LGKKPIYKKAPTNEFY APTNEFYA________ K K A Y A - 2 0 1 0 0 0 1 0 0 0 0 1 0 1 1 0 1 0 1 0 0 0 9 1 1039.4975 P31431 P31431 190 198 SDC4 Syndecan-4 yes yes 2 0.0073736 77.282 By MS/MS By MS/MS 1 1 1551400 731670 0 819770 1335 1211 1421 4372;4373 3092;3093 3093 3777 2 KASEEIEDFR VKASKFRRKASEEIED SEEIEDFRLRPQSLNG R K A F R L 1 1 0 1 0 0 3 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 10 1 1222.583 Q96FT9 Q96FT9 76 85 IFT43 Intraflagellar transport protein 43 homolog yes yes 2 0.016569 62.298 By MS/MS 1 2235300 2235300 0 0 1336 1733 1422 4374 3094 3094 2381 1 KASGPPVSELITK KSAGAAKRKASGPPVS PVSELITKAVAASKER R K A T K A 1 0 0 0 0 0 1 1 0 1 1 2 0 0 2 2 1 0 0 1 0 0 13 1 1325.7555 P10412;P16403;P16402 P10412 34 46 HIST1H1E;HIST1H1C;HIST1H1D Histone H1.4;Histone H1.2;Histone H1.3 yes no 2 3.334E-05 89.232 By MS/MS By MS/MS By MS/MS 1 1 1 5311200 1824400 1768400 1718400 1337 1137 1423 4375;4376;4377 3095;3096;3097 3097 1481 3 KASGSENEGDYNPGR KGRGAKKRKASGSENE EGDYNPGRKTSKTTSK R K A G R K 1 1 2 1 0 0 2 3 0 0 0 1 0 0 1 2 0 0 1 0 0 0 15 1 1579.6863 Q02880 Q02880 1548 1562 TOP2B DNA topoisomerase 2-beta yes yes 2 0.0072951 57.788 By matching By MS/MS By MS/MS 2 3 1 8159000 3441500 3465200 1252300 1338 1335 1424;1425 4378;4379;4380;4381;4382;4383 3098;3099;3100;3101;3102 3100 1743;1744 5 KASGSENEGDYNPGRK KGRGAKKRKASGSENE GDYNPGRKTSKTTSKK R K A R K T 1 1 2 1 0 0 2 3 0 0 0 2 0 0 1 2 0 0 1 0 0 0 16 2 1707.7812 Q02880 Q02880 1548 1563 TOP2B DNA topoisomerase 2-beta yes yes 3 0.0028513 77.357 By MS/MS By matching By MS/MS 1 2 2 10873000 1947200 4890300 4035600 1339 1335 1426 4384;4385;4386;4387;4388 3103;3104;3105 3104 1743;1744 3 KASPEPEGEAAGK LAPTPRRRKASPEPEG PEGEAAGKMTTEEQQQ R K A G K M 3 0 0 0 0 0 3 2 0 0 0 2 0 0 2 1 0 0 0 0 0 0 13 1 1269.6201 Q8IU81 Q8IU81 382 394 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes yes 2 0.0018894 80.102 By MS/MS By MS/MS 1 1 2678000 0 1447000 1231000 1340 1606 1427 4389;4390 3106;3107 3107 2202 2 KASPEPPDSAEGALK AAASLRKRKASPEPPD DSAEGALKLGEEQQRQ R K A L K L 3 0 0 1 0 0 2 1 0 0 1 2 0 0 3 2 0 0 0 0 0 0 15 1 1495.7518 Q9H1B7 Q9H1B7 545 559 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 2 0.0048539 62.69 By MS/MS By matching By matching 1 1 1 11216000 3516000 4378400 3321300 1341 1812 1428 4391;4392;4393 3108 3108 2531 1 KASQLVGIEK VHNSTQKRKASQLVGI SQLVGIEKKFHPDV__ R K A E K K 1 0 0 0 0 1 1 1 0 1 1 2 0 0 0 1 0 0 0 1 0 0 10 1 1071.6288 Q9NPD8 Q9NPD8 182 191 UBE2T Ubiquitin-conjugating enzyme E2 T yes yes 2 0.006119 77.204 By MS/MS By MS/MS By MS/MS 1 1 1 1877200 665400 596820 614970 1342 1845 1429 4394;4395;4396 3109;3110;3111 3110 2590 3 KAVVLPGGTATSPK LMAASVARKAVVLPGG GGTATSPKMIAKNVLG R K A P K M 2 0 0 0 0 0 0 2 0 0 1 2 0 0 2 1 2 0 0 2 0 0 14 1 1324.7715 Q8N1G0;H0Y5I5;F8WCX2 Q8N1G0 422 435 ZNF687 Zinc finger protein 687 yes no 2 0.0021477 76.156 By matching By matching By MS/MS 1 1 1 3140900 1055700 1074600 1010600 1343 1624 1430 4397;4398;4399 3112 3112 2226 1 KCSITVSQSLVK EAKEELAKKCSITVSQ TVSQSLVKDPKERGSK K K C V K D 0 0 0 0 1 1 0 0 0 1 1 2 0 0 0 3 1 0 0 2 0 0 12 1 1348.7384 Q5JS98 Q5JS98 274 285 PBX3 yes yes 3 0.01519 45.077 By matching By matching By MS/MS 1 1 1 9367100 4611500 56622 4699000 1344 1485 1431 4400;4401;4402 3113 3113 1992;1993 1 KCSLPAEEDSVLEK ETVTGTGKKCSLPAEE EEDSVLEKLGERKPCN K K C E K L 1 0 0 1 1 0 3 0 0 0 2 2 0 0 1 2 0 0 0 1 0 0 14 1 1603.7763 E7EVA0;P27816 E7EVA0 651 664 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.0084018 60.549 By MS/MS By matching By matching 1 1 1 7102800 2635600 2610600 1856600 1345 551 1432 4403;4404;4405 3114 3114 728 1 KDAMYGNFMLKK DSQSYGKKKDAMYGNF YGNFMLKKDIAMLKEE K K D K K D 1 0 1 1 0 0 0 1 0 0 1 3 2 1 0 0 0 0 1 0 0 0 12 2 1444.7207 Q8IVF6 Q8IVF6 321 332 ANKRD18A Ankyrin repeat domain-containing protein 18A yes yes 2 0.0087063 44.863 By MS/MS By matching By matching 1 1 1 1592800 691450 489330 411990 1346 1608 1433 4406;4407;4408 3115 3115 101 1 KDDDSDDESQSSHTGK KKVKKKGRKDDDSDDE SQSSHTGKKKPEISFM R K D G K K 0 0 0 5 0 1 1 1 1 0 0 2 0 0 0 4 1 0 0 0 0 0 16 1 1749.6925 O94874 O94874 454 469 UFL1 E3 UFM1-protein ligase 1 yes yes 3 0.010462 46.68 By MS/MS 1 430440 0 430440 0 1347 1054 1434 4409 3116 3116 1416 0 KDDETVDSLGPLEK RYLSGEKKKDDETVDS DSLGPLEKGQVKNEAL K K D E K G 0 0 0 3 0 0 2 1 0 0 2 2 0 0 1 1 1 0 0 1 0 0 14 1 1544.757 Q9UJX2 Q9UJX2 130 143 CDC23 Cell division cycle protein 23 homolog yes yes 3 0.0095633 43.761 By MS/MS 1 514160 0 0 514160 1348 1910 1435 4410 3117 3117 3532 1 KDDSHSAEDSEDEKEDHK EDKDVKTKKDDSHSAE EDEKEDHKNVRQQRQA K K D H K N 1 0 0 5 0 0 4 0 2 0 0 3 0 0 0 3 0 0 0 0 0 0 18 2 2099.8516 Q9H1E3 Q9H1E3 70 87 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 0.0053677 69.03 By MS/MS By matching By matching 1 1 1 3799300 2067600 1388600 343150 1349 1813 1436 4411;4412;4413 3118 3118 2533 1 KDLYANTVLSGGTTMYPGIADR MKCDVDIRKDLYANTV MYPGIADRMQKEITAL R K D D R M 2 1 1 2 0 0 0 3 0 1 2 1 1 0 1 1 3 0 2 1 0 0 22 1 2342.1576 P63261;P60709 P63261 291 312 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 3 0.00095507 59.574 By MS/MS By matching By matching 1 1 1 3712400 1810100 934990 967370 1350 1305 1437 4414;4415;4416 3119 3119 130 1 KDNEESEQPPVPGTPTLR IDFGSLLKKDNEESEQ VPGTPTLRNRTFSESS K K D L R N 0 1 1 1 0 1 3 1 0 0 1 1 0 0 4 1 2 0 0 1 0 0 18 1 1992.9752 O15439 O15439 633 650 ABCC4 Multidrug resistance-associated protein 4 yes yes 3 0.00073451 64.87 By MS/MS By MS/MS By MS/MS 1 1 1 6013300 2244900 2186300 1582200 1351 996 1438 4417;4418;4419 3120;3121;3122 3121 3237 3 KDNLTMHMRCHTSVK FCDKCFSRKDNLTMHM MRCHTSVKPHKCHLCD R K D V K P 0 1 1 1 1 0 0 0 2 0 1 2 2 0 0 1 2 0 0 1 0 0 15 2 1856.8808 H0Y669;A2A2N5;Q9NTW7 H0Y669 48 62 ZFP64 Zinc finger protein 64 homolog, isoforms 3 and 4 yes no 3 0.016683 40.751 By MS/MS 1 0 0 0 0 1352 294 1439 4420 3123 3123 2969 1 KDSDTPQEPSEKAK SVLKKNRRKDSDTPQE QEPSEKAKEQQAEAEL R K D A K E 1 0 0 2 0 1 2 0 0 0 0 3 0 0 2 2 1 0 0 0 0 0 14 2 1558.7475 Q8NA47 Q8NA47 10 23 CCDC63 Coiled-coil domain-containing protein 63 yes yes 2 0.0072743 62.69 By MS/MS 1 249650 0 249650 0 1353 1646 1440 4421 3124 3124 2250 0 KDSQNSSQHSVSSHR PKSQPLERKDSQNSSQ QHSVSSHRSLHTASPS R K D H R S 0 1 1 1 0 2 0 0 2 0 0 1 0 0 0 6 0 0 0 1 0 0 15 1 1682.7721 A0A087WXD2;H7C5T8;H7C4U7;H7C535;A0A087WT53;Q96QZ7 A0A087WXD2 432 446 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 yes no 3 0.0020836 70.272 By matching By MS/MS By matching 1 1 1 1288400 617330 356320 314780 1354 19 1441 4422;4423;4424 3125 3125 20 1 KDSSSEVFSDAAK SSEDSGSRKDSSSEVF EVFSDAAKEGWLHFRP R K D A K E 2 0 0 2 0 0 1 0 0 0 0 2 0 1 0 4 0 0 0 1 0 0 13 1 1369.6361 A0A1B0GTZ9;E7ESW5;F8W9U9;A0A1B0GV73;Q5T5U3 A0A1B0GTZ9 15 27 ARHGAP21 Rho GTPase-activating protein 21 yes no 2 0.013838 57.788 By matching By MS/MS By matching 1 1 1 4957400 1928400 1924300 1104700 1355 275 1442 4425;4426;4427 3126 3126 365 1 KDYDTLSK IERSNVVRKDYDTLSK KDYDTLSKCSPKMPPA R K D S K C 0 0 0 2 0 0 0 0 0 0 1 2 0 0 0 1 1 0 1 0 0 0 8 1 968.48148 Q9UHR4 Q9UHR4 272 279 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 7.7706E-21 131.22 By MS/MS By MS/MS By MS/MS 2 2 1 6658200 1909900 2973300 1775000 1356 1906 1443 4428;4429;4430;4431;4432 3127;3128;3129;3130 3127 3927 4 KEDALLYQSK ADMYDLPKKEDALLYQ DALLYQSKGYNDDYYE K K E S K G 1 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 0 0 1 0 0 0 10 1 1193.6292 Q5HY57;P50402 Q5HY57 44 53 EMD Emerin yes no 2 0.010456 66.056 By MS/MS By matching By MS/MS 1 1 1 1576300 513650 659500 403170 1357 1268 1444 4433;4434;4435 3131;3132 3132 1676;3810 2 KEDLVFIFWAPESAPLK TYETKESKKEDLVFIF APESAPLKSKMIYASS K K E L K S 2 0 0 1 0 0 2 0 0 1 2 2 0 2 2 1 0 1 0 1 0 0 17 1 1989.0612 E9PP50;P23528;E9PQB7;G3V1A4;E9PK25;Q9Y281 E9PP50 96 112 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2;3 2.9395E-13 100.69 By MS/MS By MS/MS By MS/MS 1 2 2 31985000 10021000 12216000 9748200 1358 613 1445 4436;4437;4438;4439;4440 3133;3134;3135;3136 3134 4 KEEPSQNDISPK PKSKKAKKKEEPSQND SQNDISPKTKSLRKKK K K E P K T 0 0 1 1 0 1 2 0 0 1 0 2 0 0 2 2 0 0 0 0 0 0 12 1 1370.6678 Q9NR30 Q9NR30 80 91 DDX21 Nucleolar RNA helicase 2 yes yes 2 0.00057692 92.039 By MS/MS By matching By MS/MS 1 1 1 2908100 868040 1150800 889200 1359 1850 1446 4441;4442;4443 3137;3138 3138 2601;2602 2 KEESPPPPK KPLPPTVKKEESPPPP EESPPPPKVVNPLIGL K K E P K V 0 0 0 0 0 0 2 0 0 0 0 2 0 0 4 1 0 0 0 0 0 0 9 1 1007.5288 E9PGM9;P78332 E9PGM9 756 764 RBM6 RNA-binding protein 6 yes no 2 0.012246 74.698 By MS/MS By MS/MS By matching 1 1 1 2315600 799170 843100 673290 1360 583 1447 4444;4445;4446 3139;3140 3140 770 2 KELHNSPKTMNK FKRIKETKKELHNSPK NSPKTMNKTNQVYAAN K K E N K T 0 0 2 0 0 0 1 0 1 0 1 3 1 0 1 1 1 0 0 0 0 0 12 2 1425.7398 Q5T890 Q5T890 1022 1033 ERCC6L2 DNA excision repair protein ERCC-6-like 2 yes yes 3 0.015191 45.653 By MS/MS 1 188510 0 0 188510 1361 1510 1448 4447 3141 3141 2041 0 KELSPAGSISK AKKLKRMKKELSPAGS SPAGSISKNSPATLFE K K E S K N 1 0 0 0 0 0 1 1 0 1 1 2 0 0 1 3 0 0 0 0 0 0 11 1 1115.6186 O95453 O95453 616 626 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.012298 62.528 By MS/MS 1 2139700 0 0 2139700 1362 1069 1449 4448 3142 3142 1436 1 KETESEAEDNLDDLEK PVAAPEPKKETESEAE DNLDDLEKHLREKALR K K E E K H 1 0 1 3 0 0 5 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 16 1 1863.8222 A9Z1X7;Q8IYB3 A9Z1X7 879 894 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 2.6103E-20 128.29 By MS/MS By MS/MS By MS/MS 3 3 4 93774000 33105000 37233000 23436000 1363 322 1450 4449;4450;4451;4452;4453;4454;4455;4456;4457;4458 3143;3144;3145;3146;3147;3148;3149;3150 3145 435;2984 8 KETPPPLVPPAAR ________________ PLVPPAAREWNLPPNA R K E A R E 2 1 0 0 0 0 1 0 0 0 1 1 0 0 5 0 1 0 0 1 0 0 13 1 1371.7874 Q9BQA1 Q9BQA1 3 15 WDR77 Methylosome protein 50 yes yes 2;3 4.1844E-11 113.54 By MS/MS By MS/MS By MS/MS 2 2 2 29551000 10416000 12271000 6863500 1364 1774 1451 4459;4460;4461;4462;4463;4464 3151;3152;3153;3154;3155;3156 3156 3485 6 KETQSPEQVK NSERITVKKETQSPEQ TQSPEQVKSEKLKDLF K K E V K S 0 0 0 0 0 2 2 0 0 0 0 2 0 0 1 1 1 0 0 1 0 0 10 1 1172.6037 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 492 501 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 7.9883E-06 133.88 By MS/MS By MS/MS By MS/MS 1 1 1 45579000 13506000 18133000 13940000 1365 596 1452 4465;4466;4467 3157;3158;3159 3159 794;3097 3 KETQSPEQVKSEK NSERITVKKETQSPEQ PEQVKSEKLKDLFDYS K K E E K L 0 0 0 0 0 2 3 0 0 0 0 3 0 0 1 2 1 0 0 1 0 0 13 2 1516.7733 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 492 504 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0076352 67.994 By MS/MS By matching 1 1 38174000 24202000 0 13972000 1366 596 1453 4468;4469 3160 3160 794;3097 1 KEVSKYSDIQR QYVPMLERKEVSKYSD SKYSDIQRSLYDRPAS R K E Q R S 0 1 0 1 0 1 1 0 0 1 0 2 0 0 0 2 0 0 1 1 0 0 11 2 1351.7096 A0A0B4J203;P16234 A0A0B4J203 509 519 FIP1L1;PDGFRA Platelet-derived growth factor receptor alpha yes no 2 0.017894 48.091 By MS/MS By matching By matching 1 1 1 2212000 763550 911660 536770 1367 176 1454 4470;4471;4472 3161 3161 3595 1 KEVSPEVVR KREEIIIKKEVSPEVV EVSPEVVRSKLSPSPS K K E V R S 0 1 0 0 0 0 2 0 0 0 0 1 0 0 1 1 0 0 0 3 0 0 9 1 1041.5819 Q5T200;A0A087WX14 Q5T200 195 203 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.0083375 81.625 By matching By matching By MS/MS 1 1 1 5537900 3001300 177740 2358900 1368 1501 1455 4473;4474;4475 3162 3162 2021 1 KFDGVEGPRTPK FDYQFGYRKFDGVEGP VEGPRTPKYMNNITYY R K F P K Y 0 1 0 1 0 0 1 2 0 0 0 2 0 1 2 0 1 0 0 1 0 0 12 2 1329.7041 A0A0B4J210;Q6PKG0;E5RH50;H0YBW1;H0YAN4 A0A0B4J210 367 378 LARP1 La-related protein 1 yes no 3 0.00053459 89.466 By MS/MS By MS/MS By MS/MS 1 1 1 8158700 3356800 2262600 2539300 1369 177 1456 4476;4477;4478 3163;3164;3165 3165 2928 3 KFQEQECPPSPEPTR HELVRVIRKFQEQECP PPSPEPTRKEKDKKGC R K F T R K 0 1 0 0 1 2 3 0 0 0 0 1 0 1 4 1 1 0 0 0 0 0 15 1 1828.8414 P62070 P62070 177 191 RRAS2 Ras-related protein R-Ras2 yes yes 3 0.0030352 67.648 By matching By MS/MS By MS/MS 1 1 1 10398000 5272700 2917000 2208200 1370 1308 1457 4479;4480;4481 3166;3167 3167 1720 2 KFQEQECPPSPEPTRK HELVRVIRKFQEQECP PSPEPTRKEKDKKGCH R K F R K E 0 1 0 0 1 2 3 0 0 0 0 2 0 1 4 1 1 0 0 0 0 0 16 2 1956.9364 P62070 P62070 177 192 RRAS2 Ras-related protein R-Ras2 yes yes 3 0.0055761 63.706 By matching By MS/MS By MS/MS 1 1 1 10745000 4545300 3616300 2582900 1371 1308 1458 4482;4483;4484 3168;3169 3169 1720 2 KFSKEEPVSSGPEEAVGK RSGSKKKRKFSKEEPV GPEEAVGKSSSKKKKK R K F G K S 1 0 0 0 0 0 4 2 0 0 0 3 0 1 2 3 0 0 0 2 0 0 18 2 1903.9527 O00567 O00567 561 578 NOP56 Nucleolar protein 56 yes yes 3 0.013753 46.249 By MS/MS 1 3060200 3060200 0 0 1372 978 1459 4485 3170 3170 1295;1296 0 KGAAPTPPGK APAKESPRKGAAPTPP AAPTPPGKTGPSAAQA R K G G K T 2 0 0 0 0 0 0 2 0 0 0 2 0 0 3 0 1 0 0 0 0 0 10 1 922.52362 J3KQ96;E7ETY2;Q13428;H0YAB7 J3KQ96 909 918 TCOF1 Treacle protein yes no 2 0.012919 77.185 By matching By MS/MS By MS/MS 1 1 1 5317500 1570400 2042400 1704700 1373 545 1460 4486;4487;4488 3171;3172 3172 3067 2 KGAGDGSDEEVDGK VVPRRMARKGAGDGSD SDEEVDGKADGAEAKP R K G G K A 1 0 0 3 0 0 2 4 0 0 0 2 0 0 0 1 0 0 0 1 0 0 14 1 1362.5899 P35579 P35579 1937 1950 MYH9 Myosin-9 yes yes 2 3.2188E-17 137.27 By MS/MS By MS/MS By MS/MS 1 2 2 9533200 0 5816300 3716900 1374 1221 1461 4489;4490;4491;4492;4493 3173;3174;3175;3176 3176 1577 4 KGDRSPEPGQTWTR TVGLKLHRKGDRSPEP EPGQTWTREVFSSCSS R K G T R E 0 2 0 1 0 1 1 2 0 0 0 1 0 0 2 1 2 1 0 0 0 0 14 2 1613.791 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4 Q09666 89 102 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 3 0.01599 59.607 By matching By MS/MS By matching 1 1 1 1788200 677470 470040 640680 1375 1359 1462 4494;4495;4496 3177 3177 1788 1 KGHEYTNIK EEEQKSKRKGHEYTNI GHEYTNIKYSLADQTS R K G I K Y 0 0 1 0 0 0 1 1 1 1 0 2 0 0 0 0 1 0 1 0 0 0 9 1 1088.5615 Q06124 Q06124 542 550 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 3 0.0073811 66.568 By matching By MS/MS 1 1 4090200 2260900 0 1829300 1376 1347 1463 4497;4498 3178 3178 3825 1 KGNSPNSEPPTPK RPPEADGKKGNSPNSE NSEPPTPKTAWAETSR K K G P K T 0 0 2 0 0 0 1 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 13 1 1351.6732 P48634 P48634 377 389 PRRC2A Protein PRRC2A yes yes 2 0.00010439 91.307 By matching By MS/MS By MS/MS 1 1 1 4117800 1162600 1707200 1248000 1377 1251 1464 4499;4500;4501 3179;3180;3181 3179 1641 3 KGPDEAEESQYDSGIESLR ________________ DSGIESLRSLRSLPES R K G L R S 1 1 0 2 0 1 4 2 0 1 1 1 0 0 1 3 0 0 1 0 0 0 19 1 2108.9498 H3BNC2;Q7LC14;O00221 H3BNC2 6 24 NFKBIE NF-kappa-B inhibitor epsilon yes no 3 0.01547 41.257 By MS/MS By matching By matching 1 1 1 1660800 656340 483700 520710 1378 820 1465 4502;4503;4504 3182 3182 3718 1 KGPGQPSSPQR ARGGGKGRKGPGQPSS GQPSSPQRLDRLSGLA R K G Q R L 0 1 0 0 0 2 0 2 0 0 0 1 0 0 3 2 0 0 0 0 0 0 11 1 1137.5891 O95400 O95400 188 198 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes yes 2;3 4.5024E-70 148.13 By MS/MS By MS/MS By MS/MS 2 2 1 26138000 14894000 1010300 10233000 1379 1068 1466 4505;4506;4507;4508;4509 3183;3184;3185;3186 3185 1434;1435 4 KGQGGAGAGDDEEED RVKRKNAKKGQGGAGA AGDDEEED________ K K G E D - 2 0 0 3 0 1 3 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 15 1 1433.5543 A0A024R4M0;P46781 A0A024R4M0 180 194 RPS9 40S ribosomal protein S9 yes no 2 1.4754E-18 121.68 By matching By MS/MS By MS/MS 1 1 1 2915200 1038900 1088000 788300 1380 2 1467 4510;4511;4512 3187;3188 3188 2 KGSDDAPYSPTAR FKSRSKKRKGSDDAPY APYSPTARVGPSVPRQ R K G A R V 2 1 0 2 0 0 0 1 0 0 0 1 0 0 2 2 1 0 1 0 0 0 13 1 1363.6368 E7ET14;A0A087WW48;O75151 E7ET14 110 122 PHF2 Lysine-specific demethylase PHF2 yes no 2 0.00024412 86.548 By MS/MS By MS/MS By matching 1 2 1 3032700 910060 1227700 894990 1381 57 1468 4513;4514;4515;4516 3189;3190 3189 76 2 KGSITEYTAAEEK PKTTEVIRKGSITEYT EYTAAEEKEDGRRWRM R K G E K E 2 0 0 0 0 0 3 1 0 1 0 2 0 0 0 1 2 0 1 0 0 0 13 1 1425.6987 J3KN59;Q12982 J3KN59 233 245 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 yes no 2 0.0031804 76.311 By MS/MS By MS/MS By MS/MS 1 1 1 5736100 1724000 2308100 1704000 1382 898 1469 4517;4518;4519 3191;3192;3193 3192 1206;3209 3 KGSPTPGFSTR PTSAYPERKGSPTPGF PTPGFSTRRGSPTTGF R K G T R R 0 1 0 0 0 0 0 2 0 0 0 1 0 1 2 2 2 0 0 0 0 0 11 1 1133.5829 J3KPS2;Q6ZRV2 J3KPS2 606 616 FAM83H Protein FAM83H yes no 2 0.011191 65.219 By MS/MS By matching By MS/MS 1 1 1 2281500 796140 945420 539940 1383 907 1470 4520;4521;4522 3194;3195 3194 1217 1 KGSSGNASEVSVACLTER IPSIERSRKGSSGNAS SVACLTERIHQMEENQ R K G E R I 2 1 1 0 1 0 2 2 0 0 1 1 0 0 0 4 1 0 0 2 0 0 18 1 1850.8792 F8WAN1;Q69YQ0;C9J8U1 F8WAN1 382 399 SPECC1L-ADORA2A;SPECC1L Cytospin-A yes no 3 0.0015446 74.618 By matching By MS/MS By MS/MS 1 1 1 5669400 2069600 1777400 1822300 1384 694 1471 4523;4524;4525 3196;3197 3196 927;928 2 KGSSSSVCSVASSSDISLGSTK AAAGSSSRKGSSSSVC DISLGSTKTERRSEIV R K G T K T 1 0 0 1 1 0 0 2 0 1 1 2 0 0 0 10 1 0 0 2 0 0 22 1 2130.011 H0YJP0;A0A087X2H1;Q9ULT8 H0YJP0 809 830 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes no 3 0.0021979 68.569 By matching By matching By MS/MS 1 1 1 3379600 1060400 885180 1434000 1385 116 1472 4526;4527;4528 3198 3198 151;152;153;154 1 KHSPSPPPPTPTESR ASANARKRKHSPSPPP PPTPTESRKKSGKKGQ R K H S R K 0 1 0 0 0 0 1 0 1 0 0 1 0 0 6 3 2 0 0 0 0 0 15 1 1613.8162 Q92922 Q92922 326 340 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2;3 6.3486E-19 123.54 By MS/MS By MS/MS By MS/MS 3 3 3 31572000 10457000 9266300 11849000 1386 1715 1473;1474 4529;4530;4531;4532;4533;4534;4535;4536;4537 3199;3200;3201;3202;3203;3204;3205;3206 3205 2353;2354;3472 8 KHSQTDLVSR KQPPPLMKKHSQTDLV SQTDLVSRLKTRKILG K K H S R L 0 1 0 1 0 1 0 0 1 0 1 1 0 0 0 2 1 0 0 1 0 0 10 1 1169.6153 E9PN66;E9PNB3;E9PKN9;E9PS55;E9PMY0;E9PMW4;E9PQ46;E9PIN5;E9PIK4;U3KQ32;E9PKZ4;E9PPM1;O14683 E9PN66 12 21 TP53I11 Tumor protein p53-inducible protein 11 yes no 3 0.00061341 101.56 By MS/MS By MS/MS By MS/MS 3 2 2 7688400 3446600 2268300 1973500 1387 587 1475 4538;4539;4540;4541;4542;4543;4544 3207;3208;3209;3210;3211;3212 3208 778;3092 6 KIAEMQGKLATFQNQIMK LKEDNPGRKIAEMQGK TFQNQIMKLENCVQAN R K I M K L 2 0 1 0 0 3 1 1 0 2 1 3 2 1 0 0 1 0 0 0 0 0 18 2 2078.1017 B7ZBA8 B7ZBA8 380 397 CCDC154 yes yes 2 0.012242 48.948 By MS/MS 1 0 0 0 0 1388 378 1476 4545 3213 3213 3007 1 KIDTHPSPSHSSTVK PEREQKRRKIDTHPSP PSHSSTVKVSIA____ R K I V K V 0 0 0 1 0 0 0 0 2 1 0 2 0 0 2 4 2 0 0 1 0 0 15 1 1619.8267 H7C477;H0Y7U4;A0A0C4DG98;Q8NI27;H0Y594 H7C477 147 161 THOC2 THO complex subunit 2 yes no 4 0.0020225 49.188 By MS/MS By matching 1 1 2583900 0 1867600 716290 1389 193 1477 4546;4547 3214 3214 265 1 KIEATGVIQSCAK TVKQRCKRKIEATGVI GVIQSCAKEAKRILED R K I A K E 2 0 0 0 1 1 1 1 0 2 0 2 0 0 0 1 1 0 0 1 0 0 13 1 1403.7442 A6NNN6;E7ETA6;Q15154;H0YBA1 A6NNN6 1653 1665 PCM1 Pericentriolar material 1 protein yes no 2 0.0099648 59.116 By matching By MS/MS 1 1 2053500 650270 1403200 0 1390 310 1478 4548;4549 3215 3215 2974 1 KISPPSYAR REKRLRGRKISPPSYA ISPPSYARRDSPTYDP R K I A R R 1 1 0 0 0 0 0 0 0 1 0 1 0 0 2 2 0 0 1 0 0 0 9 1 1017.5607 F5H0Q6;A0A0A0MQS2;Q8N2M8 F5H0Q6 283 291 CLASRP CLK4-associating serine/arginine rich protein yes no 2 0.0043838 96.756 By MS/MS By matching By matching 1 1 1 3850100 1317300 1283400 1249500 1391 123 1479 4550;4551;4552 3216 3216 162 1 KITIADCGQLE SRNGKTSKKITIADCG IADCGQLE________ K K I L E - 1 0 0 1 1 1 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 11 1 1246.6227 P62937 P62937 155 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes yes 2 1.0444E-05 147.4 By MS/MS By MS/MS By MS/MS 1 1 1 15226000 4053000 7789700 3383800 1392 1315 1480 4553;4554;4555 3217;3218;3219 3218 3 KITSVSQVPR KIWEGIARKITSVSQV TSVSQVPRSVKDIKHR R K I P R S 0 1 0 0 0 1 0 0 0 1 0 1 0 0 1 2 1 0 0 2 0 0 10 1 1113.6506 H3BSZ2 H3BSZ2 205 214 PRDM11 yes yes 2 0.0012585 87.568 By MS/MS 1 4048300 4048300 0 0 1393 845 1481 4556 3220 3220 124 1137;1138 1 KIYEDGDDDMKR EGLMNVLKKIYEDGDD DGDDDMKRTINKAWVE K K I K R T 0 1 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 0 1 0 0 0 12 2 1483.6613 Q9HB71 Q9HB71 197 208 CACYBP Calcyclin-binding protein yes yes 3 0.00032346 100.73 By MS/MS By MS/MS By MS/MS 2 2 1 9941300 3680600 3466700 2794000 1394 1837 1482 4557;4558;4559;4560;4561 3221;3222;3223;3224 3223 3913 4 KIYIPLNKTAPCVR CRGNSVERKIYIPLNK NKTAPCVRLLNATHQI R K I V R L 1 1 1 0 1 0 0 0 0 2 1 2 0 0 2 0 1 0 1 1 0 0 14 2 1671.9494 Q5T211;Q5T210;Q5T209;Q92542 Q5T211 39 52 NCSTN Nicastrin yes no 2 0.016035 42.395 By MS/MS 1 0 0 0 0 1395 1502 1483 4562 3225 3225 3411;3858 1 KKAEPSEVDMNSPK FPKAKQVKKKAEPSEV EVDMNSPKSKKAKKKE K K K P K S 1 0 1 1 0 0 2 0 0 0 0 3 1 0 2 2 0 0 0 1 0 0 14 2 1558.7661 Q9NR30 Q9NR30 60 73 DDX21 Nucleolar RNA helicase 2 yes yes 3 0.00067451 77.027 By MS/MS By matching By matching 1 1 1 7676600 3443000 2322400 1911300 1396 1850 1484 4563;4564;4565 3226 3226 167 2600 1 KKEEPSQNDISPK SPKSKKAKKKEEPSQN SQNDISPKTKSLRKKK K K K P K T 0 0 1 1 0 1 2 0 0 1 0 3 0 0 2 2 0 0 0 0 0 0 13 2 1498.7627 Q9NR30 Q9NR30 79 91 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 2.1865E-11 122.33 By MS/MS By MS/MS By MS/MS 2 2 2 43475000 13209000 14442000 15824000 1397 1850 1485 4566;4567;4568;4569;4570;4571 3227;3228;3229;3230;3231;3232 3231 2601;2602 6 KKEPAITSQNSPEAR TEKDLDEKKKEPAITS SQNSPEAREERYFTV_ K K K A R E 2 1 1 0 0 1 2 0 0 1 0 2 0 0 2 2 1 0 0 0 0 0 15 2 1654.8638 E5RIS7;P23193 E5RIS7 90 104 TCEA1 Transcription elongation factor A protein 1 yes no 3 1.0809E-08 104.68 By MS/MS By MS/MS By MS/MS 1 1 1 22078000 7415800 8850000 5812400 1398 511 1486 4572;4573;4574 3233;3234;3235;3236;3237;3238 3234 651 6 KKNDIYGED FDFEEMKRKKNDIYGE KNDIYGED________ R K K E D - 0 0 1 2 0 0 1 1 0 1 0 2 0 0 0 0 0 0 1 0 0 0 9 2 1080.5088 P50395 P50395 437 445 GDI2 Rab GDP dissociation inhibitor beta yes yes 2 1.7974E-17 150.36 By MS/MS By MS/MS By MS/MS 1 1 1 18542000 5759700 6218700 6563300 1399 1267 1487 4575;4576;4577 3239;3240;3241;3242;3243;3244;3245;3246;3247;3248;3249 3248 3805 11 KKSPIINESR DKSKSKDRKKSPIINE SPIINESRSRDRGKKS R K K S R S 0 1 1 0 0 0 1 0 0 2 0 2 0 0 1 2 0 0 0 0 0 0 10 2 1170.6721 Q13523 Q13523 275 284 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes yes 3 0.018116 48.188 By MS/MS 1 0 0 0 0 1400 1392 1488 4578 3250 3250 1848 1 KLATPPAAQESSR LDLRGHKRKLATPPAA PAAQESSRRRSRKGHL R K L S R R 3 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 1 0 0 0 0 0 13 1 1354.7205 H0Y760;Q9Y4B4 H0Y760 1086 1098 RAD54L2 Helicase ARIP4 yes no 3 9.2791E-06 90.379 By MS/MS By MS/MS By MS/MS 1 1 1 2739100 971340 1155500 612290 1401 765 1489 4579;4580;4581 3251;3252;3253;3254 3254 3164 4 KLDPGSEETQTLVR DYESYTWRKLDPGSEE EETQTLVREYFSWEGA R K L V R E 0 1 0 1 0 1 2 1 0 0 2 1 0 0 1 1 2 0 0 1 0 0 14 1 1571.8155 P26641 P26641 401 414 EEF1G Elongation factor 1-gamma yes yes 3 0.004737 65.374 By MS/MS 1 0 0 0 0 1402 1196 1490 4582 3255 3255 1 KLEDVKNSPTFK SVGSVITKKLEDVKNS VKNSPTFKSFEEKVEN K K L F K S 0 0 1 1 0 0 1 0 0 0 1 3 0 1 1 1 1 0 0 1 0 0 12 2 1404.7613 H0YC42;P55327 H0YC42 164 175 TPD52 Tumor protein D52 yes no 3 0.00074091 88.108 By MS/MS By MS/MS By matching 1 1 1 10064000 4218800 3271700 2573600 1403 782 1491 4583;4584;4585 3256;3257 3257 3171 2 KLEKEEEEGISQESSEEEQ RKPRGRPKKLEKEEEE QESSEEEQ________ K K L E Q - 0 0 0 0 0 2 9 1 0 1 1 2 0 0 0 3 0 0 0 0 0 0 19 2 2235.9867 P17096 P17096 89 107 HMGA1 High mobility group protein HMG-I/HMG-Y yes yes 2;3 1.3643E-34 117.78 By MS/MS By MS/MS By MS/MS 2 2 1 135840000 48263000 58395000 29186000 1404 1164 1492 4586;4587;4588;4589;4590 3258;3259;3260;3261;3262;3263;3264;3265;3266;3267 3261 1509;1510 10 KLGAGEGGEASVSPEKTSTTSK TPRSKKKKKLGAGEGG EKTSTTSKGKAKRDKA K K L S K G 2 0 0 0 0 0 3 4 0 0 1 3 0 0 1 4 3 0 0 1 0 0 22 2 2120.0597 J3KQ96;E7ETY2;Q13428 J3KQ96 1328 1349 TCOF1 Treacle protein yes no 3 1.0842E-39 113.62 By MS/MS By matching By MS/MS 1 1 1 32667000 16654000 10743000 5269500 1405 545 1493 4591;4592;4593 3268;3269 3269 707 2 KLHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALR QEEIAFLKKLHEEEIQ PDLTAALRDVRQQYES K K L L R D 3 1 0 3 0 6 5 0 2 3 4 2 0 0 1 1 1 0 0 3 0 0 35 2 4050.1022 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 236 270 VIM Vimentin yes no 5 8.5868E-06 49.623 By MS/MS By matching 1 1 3123100 1738400 0 1384700 1406 1129 1494 4594;4595 3270 3270 1 KLLLDPSSPPTK ________________ DPSSPPTKALNGAEPN R K L T K A 0 0 0 1 0 0 0 0 0 0 3 2 0 0 3 2 1 0 0 0 0 0 12 1 1294.7497 H0YFI1;F5H479;F5GX19;F5H3Y3;Q6IAA8 H0YFI1 7 18 LAMTOR1 Ragulator complex protein LAMTOR1 yes no 2 0.005536 89.46 By MS/MS 1 0 0 0 0 1407 635 1495 4596 3271 3271 854 1 KLMFKTEGPDSD GQSTSRHKKLMFKTEG KTEGPDSD________ K K L S D - 0 0 0 2 0 0 1 1 0 0 1 2 1 1 1 1 1 0 0 0 0 0 12 2 1366.6439 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 223 234 TP53 Cellular tumor antigen p53 yes no 2 8.6627E-28 151.99 By MS/MS By MS/MS By MS/MS 2 2 2 26067000 8282200 6449500 11335000 1408 89 1496;1497 4597;4598;4599;4600;4601;4602 3272;3273;3274;3275 3274 7 110 4 KLNISSLSQLSPPNDHK RSNQLVPKKLNISSLS LSPPNDHKDIHAALQP K K L H K D 0 0 2 1 0 1 0 0 1 1 3 2 0 0 2 4 0 0 0 0 0 0 17 1 1877.0007 H0YM30;Q68DA7 H0YM30 734 750 FMN1 Formin-1 yes no 2 0.017142 41.052 By MS/MS 1 0 0 0 0 1409 805 1498 4603 3276 3276 1094;1095;1096 1 KLSGDQPAAR KGWESRKRKLSGDQPA SGDQPAARTPRSKKKK R K L A R T 2 1 0 1 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 1 1041.5567 J3KQ96;E7ETY2;Q13428 J3KQ96 1310 1319 TCOF1 Treacle protein yes no 2 0.0028938 86.262 By MS/MS By MS/MS 1 1 40677000 17787000 0 22890000 1410 545 1499 4604;4605 3277;3278 3277 708 2 KLSNPDIFSSTGK GVSPLLFRKLSNPDIF DIFSSTGKVKLQRQLS R K L G K V 0 0 1 1 0 0 0 1 0 1 1 2 0 1 1 3 1 0 0 0 0 0 13 1 1392.7249 Q6P0Q8 Q6P0Q8 72 84 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 2 0.018163 54.094 By MS/MS By matching By matching 1 1 1 2228200 881440 698360 648380 1411 1544 1500 4606;4607;4608 3279 3279 2100 1 KLSPIIEDSR YSQTLSIKKLSPIIED SPIIEDSREATHSSGF K K L S R E 0 1 0 1 0 0 1 0 0 2 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1156.6452 O60566 O60566 668 677 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes yes 2 0.0032979 88.092 By matching By MS/MS By matching 1 1 1 4156800 1351400 1535900 1269500 1412 1022 1501 4609;4610;4611 3280 3280 1369 1 KLSRSPSPR KKPRSPKRKLSRSPSP LSRSPSPRRHKKEKKK R K L P R R 0 2 0 0 0 0 0 0 0 0 1 1 0 0 2 3 0 0 0 0 0 0 9 2 1026.5934 Q5T757;Q05519;Q5T760 Q5T757 304 312 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.0056991 60.157 By MS/MS By MS/MS By MS/MS 1 1 1 15221000 5325300 5473800 4422100 1413 1344 1502 4612;4613;4614 3281;3282;3283;3284 3281 1761;1762;1763 4 KLSSNCSGVEGDVTDEDEGAEMSQR GKILIKAKKLSSNCSG EGAEMSQRMGKENMEQ K K L Q R M 1 1 1 3 1 1 4 3 0 0 1 1 1 0 0 4 1 0 0 2 0 0 25 1 2699.1287 Q9UPR0;H7C276 Q9UPR0 571 595 PLCL2 Inactive phospholipase C-like protein 2;Phosphoinositide phospholipase C yes no 3 0.002842 46.403 By matching By MS/MS By matching 1 1 1 4998000 1938200 1839000 1220800 1414 1939 1503 4615;4616;4617 3285 3285 3537 1 KLSSSDAPAQDTGSSAAAVETDASR KVAGKVTRKLSSSDAP AVETDASRTGAQQKMR R K L S R T 6 1 0 3 0 1 1 1 0 0 1 1 0 0 1 6 2 0 0 1 0 0 25 1 2421.1256 A0A1B0GV47;Q7Z4S6;H0YIM6;H0YHT2 A0A1B0GV47 829 853 KIF21A Kinesin-like protein KIF21A yes no 3 2.292E-21 93.073 By MS/MS By MS/MS By matching 1 1 1 44120000 15227000 13917000 14976000 1415 279 1504 4618;4619;4620 3286;3287;3288 3287 370;371 3 KLSSSSEPYEEDEFNDDQSIKK AGGGPRKRKLSSSSEP NDDQSIKKTRLDHCAW R K L K K T 0 0 1 3 0 1 4 0 0 1 1 3 0 1 1 5 0 0 1 0 0 0 22 2 2574.1609 D6RAY8;Q9H4L7 D6RAY8 209 230 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 3 0.0052127 48.229 By MS/MS By matching By matching 1 1 1 12714000 3918900 4623500 4172100 1416 487 1505 4621;4622;4623 3289 3289 630;631;632;633 1 KLSVPTSDEEDEVPAPKPR KELMERLKKLSVPTSD EVPAPKPRGGKKTKGG K K L P R G 1 1 0 2 0 0 3 0 0 0 1 2 0 0 4 2 1 0 0 2 0 0 19 2 2093.0641 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 104 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 2.1135E-23 105.57 By MS/MS By MS/MS By MS/MS 2 1 2 17178000 5738100 5083700 6356300 1417 1497 1506;1507 4624;4625;4626;4627;4628 3290;3291;3292;3293;3294 3290 2017;3409 5 KMDLTVNGEQLDLDPGQTLIYYVDEK GESLFHSKKMDLTVNG LIYYVDEKAPEFSMQG K K M E K A 0 0 1 4 0 2 2 2 0 1 4 2 1 0 1 0 2 0 2 2 0 0 26 1 2996.4689 B5MCA4;P16422 B5MCA4 258 283 EPCAM Epithelial cell adhesion molecule yes no 3 0.00016361 54.096 By MS/MS By matching By matching 1 1 1 11223000 6528800 1875900 2818400 1418 362 1508 4629;4630;4631 3295 3295 21 29 1 KMLGEDSDEEEEMDTSER QQQILLEKKMLGEDSD EEMDTSERKINAGSQD K K M E R K 0 1 0 3 0 0 6 1 0 0 1 1 2 0 0 2 1 0 0 0 0 0 18 1 2128.8413 H7C256;A0A087WWF4;A0A087X0M4;Q9BWU0 H7C256 68 85 SLC4A1AP Kanadaptin yes no 3 0.0030384 61.963 By matching By MS/MS By MS/MS 1 1 1 3231000 787180 1157900 1285900 1419 60 1509 4632;4633;4634 3296;3297;3298 3298 77 3 KMVTPYANGWK TARVMTNKKMVTPYAN TPYANGWKLSPVVGAV K K M W K L 1 0 1 0 0 0 0 1 0 0 0 2 1 0 1 0 1 1 1 1 0 0 11 1 1293.654 A0A0G2JRD1;S4R3K7;S4R469;B0QYV1;B0QYY4;A0A0G2JRA5;O43251 A0A0G2JRD1 44 54 RBFOX2 RNA binding protein fox-1 homolog;RNA binding protein fox-1 homolog 2 yes no 2 0.010502 62.338 By MS/MS By matching By matching 1 1 1 7900000 3177300 1997700 2725000 1420 232 1510 4635;4636;4637 3299 3299 2945 1 KNDLITHQRIHTGEK ECGKFSLRKNDLITHQ QRIHTGEKPYKCSDCG R K N E K P 0 1 1 1 0 1 1 1 2 2 1 2 0 0 0 0 2 0 0 0 0 0 15 2 1788.9595 H9KV89;A0A087X254;Q8N8J6 H9KV89 669 683 ZNF615 Zinc finger protein 615 yes no 2 0.01878 50.194 By MS/MS 1 0 0 0 0 1421 111 1511 4638 3300 3300 2904 1 KNGSTAVAESVASPQK EKPATGERKNGSTAVA ESVASPQKTMSVLSCI R K N Q K T 3 0 1 0 0 1 1 1 0 0 0 2 0 0 1 3 1 0 0 2 0 0 16 1 1572.8107 Q12888;A6NNK5;C9JXV0 Q12888 1016 1031 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.0075304 55.208 By MS/MS 1 0 0 0 0 1422 1367 1512 4639 3301 3301 1803 1 KNLEATYGTVR MTASQQSRKNLEATYG EATYGTVRTGNRTLFE R K N V R T 1 1 1 0 0 0 1 1 0 0 1 1 0 0 0 0 2 0 1 1 0 0 11 1 1250.6619 E7ESJ3;Q9UPS8 E7ESJ3 339 349 ANKRD26 Ankyrin repeat domain-containing protein 26 yes no 2 0.008186 81.525 By MS/MS By matching By matching 1 1 1 3191200 1294000 1130600 766560 1423 538 1513 4640;4641;4642 3302 3302 3063 1 KNPTTEETVLTK FMEPMSFRKNPTTEET TEETVLTKTSLSLQEK R K N T K T 0 0 1 0 0 0 2 0 0 0 1 2 0 0 1 0 4 0 0 1 0 0 12 1 1359.7246 Q8WWL7 Q8WWL7 572 583 CCNB3 G2/mitotic-specific cyclin-B3 yes yes 2 0.0094263 55.196 By MS/MS 1 0 0 0 0 1424 1684 1514 4643 3303 3303 3469 1 KNQKPSQVNGAPGSPTEPAGQK AKSPKLQKKNQKPSQV PTEPAGQKQHQKALPK K K N Q K Q 2 0 2 0 0 3 1 3 0 0 0 3 0 0 4 2 1 0 0 1 0 0 22 2 2219.1295 I3L1L3;Q9BQG0 I3L1L3 1174 1195 MYBBP1A Myb-binding protein 1A yes no 3 0.01775 42.908 By MS/MS By matching By matching 1 1 1 7901200 2344800 2554900 3001500 1425 885 1515 4644;4645;4646 3304 3304 49;125 1190 1 KNSLRVEGDNIYVR HLQLIEGKKNSLRVEG EGDNIYVRHSNLMLEE K K N V R H 0 2 2 1 0 0 1 1 0 1 1 1 0 0 0 1 0 0 1 2 0 0 14 2 1661.8849 O43491;H0Y5B0 O43491 612 625 EPB41L2 Band 4.1-like protein 2 yes no 3 0.0016462 65.298 By MS/MS By MS/MS By MS/MS 2 2 2 21066000 7992500 6268900 6804300 1426 1012 1516;1517 4647;4648;4649;4650;4651;4652 3305;3306;3307;3308;3309 3307 1349;3751 5 KNSTDLDSAPEDPTSPK LGSYRKKRKNSTDLDS PEDPTSPKRKMRRRSS R K N P K R 1 0 1 3 0 0 1 0 0 0 1 2 0 0 3 3 2 0 0 0 0 0 17 1 1800.8378 A0A0A0MQR4;I3L2J0;Q96RK0;I3L373;I3L135;I3L1Q4 A0A0A0MQR4 1393 1409 CIC Protein capicua homolog yes no 2 0.0097105 51.463 By MS/MS By matching By matching 1 1 1 1985400 761720 757080 466560 1427 122 1518 4653;4654;4655 3310 3310 160;2909 1 KNWWSSKSK PNPANVPKKNWWSSKS NWWSSKSKEKKHIWFG K K N S K E 0 0 1 0 0 0 0 0 0 0 0 3 0 0 0 3 0 2 0 0 0 0 9 2 1149.5931 P02458 P02458 1334 1342 COL2A1 Collagen alpha-1(II) chain;Collagen alpha-1(II) chain;Chondrocalcin yes yes 2 0.0071574 72.23 By MS/MS 1 0 0 0 0 1428 1092 1519 4656 3311 3311 59 1451 1 KPAQEETEETSSQESAEED WPQQVVQKKPAQEETE SQESAEED________ K K P E D - 2 0 0 1 0 2 7 0 0 0 0 1 0 0 1 3 2 0 0 0 0 0 19 1 2122.8662 P52926 P52926 91 109 HMGA2 High mobility group protein HMGI-C yes yes 2 0.0064558 58.831 By matching By matching By MS/MS 1 1 1 4021300 1944700 925900 1150700 1429 1287 1520 4657;4658;4659 3312 3312 1695 1 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR RQVEPPAKKPATPAED DKEAAQLREERLRQYA K K P L R E 4 1 1 8 0 1 6 1 0 1 2 2 0 1 2 1 1 0 0 0 0 0 32 2 3576.55 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PQZ1;H0YE72 E9PL71 120 151 EEF1D Elongation factor 1-delta yes no 4 9.6912E-45 94.834 By MS/MS By MS/MS By MS/MS 1 1 1 23913000 9377800 5506800 9027900 1430 109 1521 4660;4661;4662 3313;3314;3315 3315 141 3 KPEDVLDDDDAGSAPLK IFIYEKRRKPEDVLDD DAGSAPLKSSGQHQND R K P L K S 2 0 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 17 1 1783.8476 A0A087WUV8;P35613 A0A087WUV8 154 170 BSG Basigin yes no 2;3 0.010394 51.265 By matching By matching By MS/MS 1 1 2 8285400 2840400 2810100 2635000 1431 42 1522 4663;4664;4665;4666 3316;3317 3316 54 2 KPESPYGNLCDAPDSPRPVK NVRKPTPRKPESPYGN PDSPRPVKASREDSGL R K P V K A 1 1 1 2 1 0 1 1 0 0 1 2 0 0 5 2 0 0 1 1 0 0 20 2 2226.0739 Q9UKA4 Q9UKA4 419 438 AKAP11 A-kinase anchor protein 11 yes yes 3 0.010692 58.29 By MS/MS By matching By matching 1 1 1 2415900 883540 877570 654730 1432 1913 1523 4667;4668;4669 3318 3318 2698 1 KPGPPLSPEIRSPAGSPELR PPVSPELRKPGPPLSP PAGSPELRKPSGSPDL R K P L R K 1 2 0 0 0 0 2 2 0 1 2 1 0 0 6 3 0 0 0 0 0 0 20 2 2084.1378 Q96JM3 Q96JM3 421 440 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.018692 42.791 By matching By MS/MS 1 1 6935900 0 4334700 2601200 1433 1743 1524 4670;4671 3319 3319 2399;2400;2401 1 KPGPSGPSESPK KPVFPETRKPGPSGPS SGPSESPKAASDIWKP R K P P K A 0 0 0 0 0 0 1 2 0 0 0 2 0 0 4 3 0 0 0 0 0 0 12 1 1166.5932 Q96JM3 Q96JM3 498 509 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.01066 65.472 By matching By matching By MS/MS 1 1 1 5496100 1801300 1930100 1764800 1434 1743 1525 4672;4673;4674 3320 3320 2402 1 KPIETGSPK EKEKKEEKKPIETGSP PIETGSPKTKECSVEK K K P P K T 0 0 0 0 0 0 1 1 0 1 0 2 0 0 2 1 1 0 0 0 0 0 9 1 955.53385 Q5T757;Q05519 Q5T757 383 391 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2 0.0070606 102.05 By MS/MS 1 13133000 13133000 0 0 1435 1344 1526 4675 3321 3321 3348 1 KPLVIIAEDVDGEALSTLVLNR LEIANAHRKPLVIIAE LSTLVLNRLKVGLQVV R K P N R L 2 1 1 2 0 0 2 1 0 2 4 1 0 0 1 1 1 0 0 3 0 0 22 1 2364.3264 P10809 P10809 269 290 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 3 5.1514E-07 79.942 By matching By MS/MS By MS/MS 1 1 1 16039000 6471900 5780700 3786600 1436 1140 1527 4676;4677;4678 3322;3323 3323 2 KPNNLNDTIK WLRLQREKKPNNLNDT NNLNDTIKELFRVVPG K K P I K E 0 0 3 1 0 0 0 0 0 1 1 2 0 0 1 0 1 0 0 0 0 0 10 1 1155.6248 Q11201 Q11201 109 118 ST3GAL1 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1 yes yes 2 0.0088054 51.252 By matching By MS/MS 1 1 707360 0 180420 526940 1437 1362 1528 4679;4680 3324 3324 85;86 3355 1 KPSDGSPDTKPSR LLPHAFSRKPSDGSPD SPDTKPSRLASKTKTS R K P S R L 0 1 0 2 0 0 0 1 0 0 0 2 0 0 3 3 1 0 0 0 0 0 13 2 1370.679 Q92733 Q92733 207 219 PRCC Proline-rich protein PRCC yes yes 2;3 0.0030657 80.508 By MS/MS By MS/MS By MS/MS 2 2 2 10125000 2579900 4720200 2824600 1438 1707 1529 4681;4682;4683;4684;4685;4686 3325;3326;3327;3328 3327 2346;2347 4 KPSEDEVLNK AAITETQRKPSEDEVL SEDEVLNKGFKDTSQY R K P N K G 0 0 1 1 0 0 2 0 0 0 1 2 0 0 1 1 0 0 0 1 0 0 10 1 1157.5928 Q8NDI1 Q8NDI1 1056 1065 EHBP1 EH domain-binding protein 1 yes yes 2 0.00014921 113.95 By MS/MS By matching 1 1 1238500 0 816950 421570 1439 1654 1530 4687;4688 3329;3330 3329 2265 2 KPSGSPDLWK PAGSPELRKPSGSPDL SGSPDLWKLSPDQRKT R K P W K L 0 0 0 1 0 0 0 1 0 0 1 2 0 0 2 2 0 1 0 0 0 0 10 1 1113.5819 Q96JM3 Q96JM3 441 450 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0019156 99.669 By MS/MS By MS/MS By MS/MS 1 1 1 5461400 2080700 1928200 1452500 1440 1743 1531 4689;4690;4691 3331;3332;3333 3332 2403;2404 3 KPSIVTK SGSSRSKRKPSIVTKY RKPSIVTKYVESDDEK R K P T K Y 0 0 0 0 0 0 0 0 0 1 0 2 0 0 1 1 1 0 0 1 0 0 7 1 771.48544 P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100 82 88 ATRX Transcriptional regulator ATRX yes no 2 0.0069148 86.136 By MS/MS By MS/MS By MS/MS 2 1 1 0 0 0 0 1441 1243 1532 4692;4693;4694;4695 3334;3335;3336;3337 3334 3318 4 KPSPEPEGEVGPPK VARTARKRKPSPEPEG EGEVGPPKINGEAQPW R K P P K I 0 0 0 0 0 0 3 2 0 0 0 2 0 0 5 1 0 0 0 1 0 0 14 1 1446.7355 Q7Z5L9 Q7Z5L9 358 371 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 2 0.002142 74.296 By MS/MS By matching By MS/MS 2 1 1 5311000 2562900 1550000 1198100 1442 1584 1533 4696;4697;4698;4699 3338;3339;3340;3341;3342 3341 2157 4 KPSPQPSSPR QQPAQQPKKPSPQPSS SPQPSSPRQVKRAVVV K K P P R Q 0 1 0 0 0 1 0 0 0 0 0 1 0 0 4 3 0 0 0 0 0 0 10 1 1079.5724 G3V5E1;O75909 G3V5E1 322 331 CCNK Cyclin-K yes no 2 0.0027257 73.219 By matching By MS/MS By MS/MS 1 1 1 4052100 1313800 1559000 1179300 1443 726 1534 4700;4701;4702 3343;3344 3344 979;980 2 KPSVSEEVQATPNK IQSRKVERKPSVSEEV EVQATPNKAGPKLKDP R K P N K A 1 0 1 0 0 1 2 0 0 0 0 2 0 0 2 2 1 0 0 2 0 0 14 1 1512.7784 Q9UKJ3 Q9UKJ3 1105 1118 GPATCH8 G patch domain-containing protein 8 yes yes 2 2.5863E-06 76.143 By matching By MS/MS By MS/MS 1 1 1 2981600 1013100 1229600 738860 1444 1916 1535 4703;4704;4705 3345;3346 3346 2704;2705 1 KPTAEASPVK VALDLSVRKPTAEASP TAEASPVKASRSVEHA R K P V K A 2 0 0 0 0 0 1 0 0 0 0 2 0 0 2 1 1 0 0 1 0 0 10 1 1026.571 H3BMJ2;Q6ZRI6 H3BMJ2 449 458 C15orf39 Uncharacterized protein C15orf39 yes no 2 0.0057186 73.499 By MS/MS By matching By matching 1 1 1 2655600 925290 994280 736020 1445 816 1536 4706;4707;4708 3347 3347 3178 0 KPTSPVKPIPQNTEYR NQLDGKKKKPTSPVKP IPQNTEYRTRVRKNAD K K P Y R T 0 1 1 0 0 1 1 0 0 1 0 2 0 0 4 1 2 0 1 1 0 0 16 2 1853.9999 P25054 P25054 1771 1786 APC Adenomatous polyposis coli protein yes yes 3 0.0089602 52.966 By matching By MS/MS By matching 1 1 1 2774300 1291700 768430 714100 1446 1193 1537 4709;4710;4711 3348 3348 1541;3306 1 KPVTVSPTTPTSPTEGEAS AELDRITRKPVTVSPT SPTEGEAS________ R K P A S - 1 0 0 0 0 0 2 1 0 0 0 1 0 0 4 3 5 0 0 2 0 0 19 1 1884.9317 E9PHI6;Q9Y6G9 E9PHI6 389 407 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 0.0012816 74.46 By MS/MS By MS/MS By matching 2 2 2 128270000 43512000 46670000 38090000 1447 584 1538;1539 4712;4713;4714;4715;4716;4717 3349;3350;3351;3352 3351 772;773;3087;3088;3089;3090 3 KPYRIESDEEEDFENVGK PSEQESTKKPYRIESD EDFENVGKVGSPLDYS K K P G K V 0 1 1 2 0 0 5 1 0 1 0 2 0 1 1 1 0 0 1 1 0 0 18 2 2183.0019 Q96T23 Q96T23 1339 1356 RSF1 Remodeling and spacing factor 1 yes yes 3 0.010345 58.635 By MS/MS By matching By matching 1 1 1 2746500 1465200 687900 593370 1448 1761 1540 4718;4719;4720 3353 3353 2440 1 KQEGPATQVDSAVGTLPATSPQSTSVQAK SSRISDGKKQEGPATQ QSTSVQAKGTNKLRKP K K Q A K G 4 0 0 1 0 4 1 2 0 0 1 2 0 0 3 4 4 0 0 3 0 0 29 1 2882.4621 J3KQ96;E7ETY2 J3KQ96 1054 1082 TCOF1 yes no 3 0.016525 41.086 By MS/MS By matching By matching 1 1 1 7605900 3554500 1972900 2078500 1449 545 1541 4721;4722;4723 3354 3354 709 1 KQEGTPEGLYL SKENVLYKKQEGTPEG GTPEGLYL________ K K Q Y L - 0 0 0 0 0 1 2 2 0 0 2 1 0 0 1 0 1 0 1 0 0 0 11 1 1233.6241 P62191 P62191 430 440 PSMC1 26S protease regulatory subunit 4 yes yes 2 0.0024996 74.165 By MS/MS By MS/MS By matching 1 1 1 2468500 1034100 742320 692050 1450 1310 1542 4724;4725;4726 3355;3356 3355 3818 2 KQNSPVAPTAQPK DEEDEVPKKQNSPVAP VAPTAQPKAPPSRTPQ K K Q P K A 2 0 1 0 0 2 0 0 0 0 0 2 0 0 3 1 1 0 0 1 0 0 13 1 1364.7412 Q6P1N0 Q6P1N0 452 464 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes yes 2 0.014808 56.514 By MS/MS By matching By matching 1 1 1 1596900 611620 633180 352110 1451 1546 1543 4727;4728;4729 3357 3357 2104 1 KQQQEPTGEPSPK KRGRGRPRKQQQEPTG PTGEPSPKRPRGRPKG R K Q P K R 0 0 0 0 0 3 2 1 0 0 0 2 0 0 3 1 1 0 0 0 0 0 13 1 1452.7209 P52926;F5H2U8;F5H2A4;F5H6H0 P52926 34 46 HMGA2 High mobility group protein HMGI-C yes no 2;3 1.3091E-47 158.89 By MS/MS By MS/MS By MS/MS 2 2 2 29426000 9318300 9804400 10304000 1452 1287 1544 4730;4731;4732;4733;4734;4735 3358;3359;3360;3361;3362;3363;3364;3365;3366;3367;3368;3369 3368 1696;3340 12 KQSFDDNDSEELEDKDSK KKKGQKGKKQSFDDND ELEDKDSKSKKTAKPK K K Q S K S 0 0 1 5 0 1 3 0 0 0 1 3 0 1 0 3 0 0 0 0 0 0 18 2 2127.908 A0A087WUT6;O60841 A0A087WUT6 105 122 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0011206 71.651 By matching By MS/MS 1 1 17517000 9182100 0 8334500 1453 41 1545 4736;4737 3370 3370 47;48 1 KQSGSPTLDTAPNGR NFGKNIYRKQSGSPTL LDTAPNGRYGIGYLMA R K Q G R Y 1 1 1 1 0 1 0 2 0 0 1 1 0 0 2 2 2 0 0 0 0 0 15 1 1527.7641 Q9H2J7 Q9H2J7 697 711 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.0072553 55.98 By MS/MS By MS/MS By matching 2 2 2 4345000 1465600 1789300 1090100 1454 1817 1546;1547 4738;4739;4740;4741;4742;4743 3371;3372 3371 105 2548;2549 1 KQSLGELIGTLNAAK GNWKMNGRKQSLGELI IGTLNAAKVPADTEVV R K Q A K V 2 0 1 0 0 1 1 2 0 1 3 2 0 0 0 1 1 0 0 0 0 0 15 1 1541.8777 P60174 P60174 56 70 TPI1 Triosephosphate isomerase yes yes 2 0.0040863 65.477 By MS/MS By MS/MS 1 1 5798400 3744900 0 2053500 1455 1303 1548 4744;4745 3373;3374 3373 1712 2 KQSSSEISLAVER DEAWRQRRKQSSSEIS EISLAVERARRRREEE R K Q E R A 1 1 0 0 0 1 2 0 0 1 1 1 0 0 0 4 0 0 0 1 0 0 13 1 1432.7522 P48634 P48634 454 466 PRRC2A Protein PRRC2A yes yes 2 0.0031804 76.311 By matching By matching By MS/MS 1 1 1 9321800 2995600 3434600 2891600 1456 1251 1549 4746;4747;4748 3375 3375 1642 1 KRSEGFSMDR PVKVERTRKRSEGFSM SEGFSMDRKVEKKKEP R K R D R K 0 2 0 1 0 0 1 1 0 0 0 1 1 1 0 2 0 0 0 0 0 0 10 2 1211.5717 Q7Z4V5;K7ERA4 Q7Z4V5 452 461 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 3 0.0042285 102.73 By MS/MS By MS/MS By MS/MS 2 2 2 18164000 7634800 5719700 4809800 1457 1581 1550;1551 4749;4750;4751;4752;4753;4754 3376;3377;3378 3378 2153 3 KRSPSPSPTPEAK KGGNYKKRKRSPSPSP PSPTPEAKKKNAKKGP R K R A K K 1 1 0 0 0 0 1 0 0 0 0 2 0 0 4 3 1 0 0 0 0 0 13 2 1380.7361 F8VXC8;Q8TAQ2 F8VXC8 300 312 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 0.00010871 100.4 By matching By MS/MS By MS/MS 1 1 1 9222400 3210100 3235500 2776800 1458 681 1552 4755;4756;4757 3379;3380;3381 3380 910;911;3131 3 KRSSSEDAESLAPR PEVRTGKRKRSSSEDA DAESLAPRSKVKKIIQ R K R P R S 2 2 0 1 0 0 2 0 0 0 1 1 0 0 1 4 0 0 0 0 0 0 14 2 1531.759 H0YA82;Q4G0J3 H0YA82 77 90 LARP7 La-related protein 7 yes no 3 0.0068535 53.869 By MS/MS By matching By matching 1 1 1 3397000 1233100 1375700 788120 1459 777 1553 4758;4759;4760 3382 3382 1060;1061;1062 0 KSASPEVSEGHENQHGQESEAK DEAWAFVRKSASPEVS HGQESEAKASKRLREP R K S A K A 2 0 1 0 0 2 5 2 2 0 0 2 0 0 1 4 0 0 0 1 0 0 22 1 2364.0578 O60930 O60930 73 94 RNASEH1 Ribonuclease H1 yes yes 4 0.00036901 63.936 By matching By MS/MS By MS/MS 1 1 1 10511000 2919500 4001100 3590700 1460 1029 1554 4761;4762;4763 3383;3384 3383 1378;1379 2 KSDGACDSPSSDKENSSQIAQDHQK VDEEATEKKSDGACDS QIAQDHQKKETVVKED K K S Q K K 2 0 1 4 1 3 1 1 1 1 0 3 0 0 1 6 0 0 0 0 0 0 25 2 2718.1787 Q9UIG0 Q9UIG0 151 175 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 4 0.0083573 43.888 By MS/MS By matching 1 1 1910900 0 1240000 670940 1461 1907 1555 4764;4765 3385 3385 2688;2689 1 KSEAGHASSPDSEVTSLCQK EVPEIFTKKSEAGHAS EVTSLCQKEKAELAPV K K S Q K E 2 0 0 1 1 1 2 1 1 0 1 2 0 0 1 5 1 0 0 1 0 0 20 1 2116.9695 Q6NZY4 Q6NZY4 590 609 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 3 0.0098084 50.404 By matching By MS/MS By matching 1 1 1 3752300 1611800 1037700 1102800 1462 1543 1556 4766;4767;4768 3386 3386 2098;2099 1 KSEPLDESDNDF TKPNRRVRKSEPLDES LDESDNDF________ R K S D F - 0 0 1 3 0 0 2 0 0 0 1 1 0 1 1 2 0 0 0 0 0 0 12 1 1394.5838 J3KNW5;Q96AJ1 J3KNW5 421 432 CLUAP1 Clusterin-associated protein 1 yes no 2 0.018188 55.724 By matching By MS/MS By matching 1 1 1 4199800 1440400 1557100 1202400 1463 900 1557 4769;4770;4771 3387 3387 1208 1 KSFDHLISDTK TKKLLGTRKSFDHLIS DHLISDTKAPKRQEME R K S T K A 0 0 0 2 0 0 0 0 1 1 1 2 0 1 0 2 1 0 0 0 0 0 11 1 1289.6616 J3QSG6;H0Y465;P21359 J3QSG6 337 347 NF1 Neurofibromin;Neurofibromin truncated yes no 3 0.014595 58.268 By MS/MS 1 445020 445020 0 0 1464 751 1558 4772 3388 3388 1026 1 KSISIQRVSQNVR EDEEAPSKKSISIQRV QRVSQNVRLSAQAGVA K K S V R L 0 2 1 0 0 2 0 0 0 2 0 1 0 0 0 3 0 0 0 2 0 0 13 2 1513.8689 M0QYW9 M0QYW9 59 71 ZNF418 yes yes 2 0.015097 51.268 By MS/MS 1 0 0 0 0 1465 962 1559 4773 3389 3389 1265;1266 1 KSLDSDESEDEEDDYQQK AGDPKKEKKSLDSDES EEDDYQQKRKGVEGLI K K S Q K R 0 0 0 5 0 2 4 0 0 0 1 2 0 0 0 3 0 0 1 0 0 0 18 1 2158.8662 Q13442 Q13442 56 73 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 3 0.017486 41.323 By MS/MS 1 0 0 0 0 1466 1391 1560 4774 3390 3390 1844;1845 1 KSLSDSESDDSK KEKDGTKRKSLSDSES DSESDDSKSKKKRDAA R K S S K S 0 0 0 3 0 0 1 0 0 0 1 2 0 0 0 5 0 0 0 0 0 0 12 1 1296.5681 Q13185;S4R2Y4 Q13185 92 103 CBX3 Chromobox protein homolog 3 yes no 2 1.9605E-14 140.03 By MS/MS By MS/MS By MS/MS 2 2 1 10841000 3752100 4277800 2810800 1467 1380 1561 4775;4776;4777;4778;4779 3391;3392;3393;3394 3392 1826;1827;1828;1829 3 KSLSDSESDDSKSK KEKDGTKRKSLSDSES ESDDSKSKKKRDAADK R K S S K K 0 0 0 3 0 0 1 0 0 0 1 3 0 0 0 6 0 0 0 0 0 0 14 2 1511.6951 Q13185;S4R2Y4 Q13185 92 105 CBX3 Chromobox protein homolog 3 yes no 3 0.00035957 85.496 By MS/MS By matching 1 1 6396500 0 4030900 2365600 1468 1380 1562 4780;4781 3395 3395 1826;1827;1828;1829 1 KSLSLSAK ISRPLEGKKSLSLSAK KSLSLSAKTHNIGFDK K K S A K T 1 0 0 0 0 0 0 0 0 0 2 2 0 0 0 3 0 0 0 0 0 0 8 1 832.50182 Q76FK4;F8WE42;F5H101 Q76FK4 680 687 NOL8 Nucleolar protein 8 yes no 2 0.010315 63.306 By MS/MS 1 0 0 0 0 1469 1570 1563 4782 3396 3396 2131;2132 1 KSMSTQAPL KRKGLKVRKSMSTQAP SMSTQAPL________ R K S P L - 1 0 0 0 0 1 0 0 0 0 1 1 1 0 1 2 1 0 0 0 0 0 9 1 961.49027 A0A0G2JPF3;A0A0G2JNG8;Q8IUH8 A0A0G2JPF3 676 684 SPPL2C Signal peptide peptidase-like 2C yes no 2 0.013307 55.676 By MS/MS 1 0 0 0 0 1470 230 1564 4783 3397 3397 314 1 KSNLDEEVNVIPPHTPVR FETQRTPRKSNLDEEV IPPHTPVRTVMNTIQQ R K S V R T 0 1 2 1 0 0 2 0 1 1 1 1 0 0 3 1 1 0 0 3 0 0 18 1 2043.0749 P06400 P06400 359 376 RB1 Retinoblastoma-associated protein yes yes 3 0.0024589 51.876 By matching By matching By MS/MS 1 1 1 2872800 1395500 924100 553150 1471 1111 1565 4784;4785;4786 3398;3399 3399 3277 2 KSPSDTEGLVK SPVKQAPRKSPSDTEG SDTEGLVKSLPSGSHQ R K S V K S 0 0 0 1 0 0 1 1 0 0 1 2 0 0 1 2 1 0 0 1 0 0 11 1 1159.6085 O95297 O95297 218 228 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.0013611 90.689 By MS/MS 1 3564800 0 0 3564800 1472 1066 1566 4787 3400 3400 1432 1 KSSADTEFSDECTTAER SWRSNNSRKSSADTEF DECTTAERVLMKSPSP R K S E R V 2 1 0 2 1 0 3 0 0 0 0 1 0 1 0 3 3 0 0 0 0 0 17 1 1932.8007 Q9H6S0 Q9H6S0 1200 1216 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes yes 3 4.0772E-26 124.04 By MS/MS By MS/MS By MS/MS 1 1 1 10554000 3529600 3378700 3645800 1473 1827 1567 4788;4789;4790 3401;3402;3403 3402 2564;3504 2 KSSPSVKPAVDPAAAK QLKLSITKKSSPSVKP AVDPAAAKLWTLSAND K K S A K L 4 0 0 1 0 0 0 0 0 0 0 3 0 0 3 3 0 0 0 2 0 0 16 2 1551.8621 H3BPG7;H3BV90;H3BT65;Q6FI81 H3BPG7 154 169 CIAPIN1 Anamorsin yes no 3 0.0047612 69.069 By MS/MS By matching By matching 1 1 1 6709700 2744000 1849500 2116200 1474 829 1568 4791;4792;4793 3404 3404 1116 1 KSTLNPNA KDAAEQVRKSTLNPNA KSTLNPNA________ R K S N A - 1 0 2 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 8 1 843.44503 F8W0B5 F8W0B5 289 296 ATXN2 yes yes 2 0.014235 44.863 By MS/MS 1 0 0 0 0 1475 685 1569 4794 3405 3405 914;3132 1 KSVKFQNHISYR CSLKTYKRKSVKFQNH FQNHISYREEVFFNDA R K S Y R E 0 1 1 0 0 1 0 0 1 1 0 2 0 1 0 2 0 0 1 1 0 0 12 2 1505.8103 Q5T890;H7BXQ9 Q5T890 1346 1357 ERCC6L2 DNA excision repair protein ERCC-6-like 2 yes no 2 0.0079321 43.512 By matching By MS/MS By matching 1 1 1 1326500 569360 364020 393120 1476 1510 1570 4795;4796;4797 3406 3406 93 2042;3860 1 KTAHNSEADLEESFNEHELEPSSPK MVYCRKHKKTAHNSEA ELEPSSPKSKKKSRKG K K T P K S 2 0 2 1 0 0 6 0 2 0 2 2 0 1 2 4 1 0 0 0 0 0 25 1 2824.2788 Q8IWS0 Q8IWS0 133 157 PHF6 PHD finger protein 6 yes yes 4 8.6784E-09 77.959 By MS/MS By matching By MS/MS 1 1 1 4491200 2359100 817460 1314600 1477 1612 1571 4798;4799;4800 3407;3408 3408 2209;2210;2211 2 KTAPTLSPEHWK KSGPPELRKTAPTLSP TLSPEHWKAVPPVSPE R K T W K A 1 0 0 0 0 0 1 0 1 0 1 2 0 0 2 1 2 1 0 0 0 0 12 1 1393.7354 Q96JM3 Q96JM3 399 410 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.01486 56.514 By matching By MS/MS By matching 1 1 1 6520500 2805200 1575700 2139500 1478 1743 1572 4801;4802;4803 3409 3409 2405 1 KTGSYGALAEITASK ATWRLGLRKTGSYGAL LAEITASKEGQKEKDT R K T S K E 3 0 0 0 0 0 1 2 0 1 1 2 0 0 0 2 2 0 1 0 0 0 15 1 1495.7882 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 442 456 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2;3 5.0784E-46 152.13 By MS/MS By MS/MS By MS/MS 2 2 2 17174000 3198600 7126400 6849400 1479 986 1573 4804;4805;4806;4807;4808;4809 3410;3411;3412;3413;3414 3413 1315;3234;3744 5 KTISNTFK PIKKEEKKKTISNTFK KTISNTFKPSSPGKKP K K T F K P 0 0 1 0 0 0 0 0 0 1 0 2 0 1 0 1 2 0 0 0 0 0 8 1 937.52328 A7E2U8 A7E2U8 224 231 C4orf47 UPF0602 protein C4orf47 yes yes 2 0.01506 45.368 By MS/MS 1 0 0 0 0 1480 314 1574 4810 3415 3415 2976 1 KTLPRNDANLCDANK TDLGRKFRKTLPRNDA ANLCDANKVQSDSLPS R K T N K V 2 1 3 2 1 0 0 0 0 0 2 2 0 0 1 0 1 0 0 0 0 0 15 2 1728.8577 J3QT09;Q9BQF6 J3QT09 115 129 SENP7 Sentrin-specific protease 7 yes no 2 0.015127 43.557 By MS/MS 1 0 0 0 0 1481 927 1575 4811 3416 3416 3218 1 KTPLALAGSPTPK PPSSPLLKKTPLALAG LAGSPTPKNPEDKSPQ K K T P K N 2 0 0 0 0 0 0 1 0 0 2 2 0 0 3 1 2 0 0 0 0 0 13 1 1279.75 B9EGQ5;M0QXA7;O95785 B9EGQ5 169 181 WIZ Protein Wiz yes no 2 0.012242 59.884 By matching By MS/MS By matching 1 1 1 4059300 1486700 1425800 1146900 1482 391 1576 4812;4813;4814 3417 3417 517 1 KTSAVSSPLLDQQR SSASKKDRKTSAVSSP SPLLDQQRNSKTNQSK R K T Q R N 1 1 0 1 0 2 0 0 0 0 2 1 0 0 1 3 1 0 0 1 0 0 14 1 1528.8209 Q5T200;A0A087WX14 Q5T200 236 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 4.5318E-12 114.27 By MS/MS By MS/MS By MS/MS 1 1 1 2929700 1092500 1070100 767120 1483 1501 1577 4815;4816;4817 3418;3419;3420 3418 2022;2023 3 KTSDANETEDHLESLICK GGQPHKRRKTSDANET HLESLICKVGEKSACS R K T C K V 1 0 1 2 1 0 3 0 1 1 2 2 0 0 0 2 2 0 0 0 0 0 18 1 2088.9634 F2Z2T1;Q09161 F2Z2T1 20 37 NCBP1 Nuclear cap-binding protein subunit 1 yes no 3 0.0029764 65.905 By matching By MS/MS 1 1 17619000 12594000 5025500 0 1484 623 1578 4818;4819 3421 3421 843 1 KTSQSEEEEAPR LDGAGKRRKTSQSEEE SEEEEAPRGHRGERPT R K T P R G 1 1 0 0 0 1 4 0 0 0 0 1 0 0 1 2 1 0 0 0 0 0 12 1 1389.6372 Q7RTP6;J3KSK6 Q7RTP6 683 694 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes no 2 0.010955 64.64 By MS/MS By matching 1 1 991900 545230 0 446670 1485 1575 1579 4820;4821 3422 3422 2144 1 KTVTYEDPQAVGGLASALDNR GNSLAEQRKTVTYEDP LASALDNRKQSSEGTF R K T N R K 3 1 1 2 0 1 1 2 0 0 2 1 0 0 1 1 2 0 1 2 0 0 21 1 2204.1073 F5H3S6;B7Z2U2;Q6ZVM7 F5H3S6 252 272 TOM1L2 TOM1-like protein 2 yes no 2;3 0.0031307 55.173 By MS/MS By matching By MS/MS 2 1 2 4178200 2143800 735020 1299400 1486 370 1580 4822;4823;4824;4825;4826 3423;3424;3425 3425 3005;3006 3 KVAGQSGYK SGGKILVRKVAGQSGY VAGQSGYKGSYSNGVQ R K V Y K G 1 0 0 0 0 1 0 2 0 0 0 2 0 0 0 1 0 0 1 1 0 0 9 1 936.50288 B5MD45;Q6UXI7 B5MD45 84 92 VIT Vitrin yes no 2 0.0091388 66.429 By MS/MS 1 32685000 0 32685000 0 1487 367 1581 4827 3426;3427 3427 2 KVDSPFGPGSPSK GSGKHSSRKVDSPFGP FGPGSPSKGFFSRGPQ R K V S K G 0 0 0 1 0 0 0 2 0 0 0 2 0 1 3 3 0 0 0 1 0 0 13 1 1301.6616 F8WDA1;Q9UGJ0 F8WDA1 62 74 PRKAG2 5-AMP-activated protein kinase subunit gamma-2 yes no 2 0.0094088 50.659 By matching By MS/MS 1 1 945460 0 488870 456590 1488 698 1582 4828;4829 3428 3428 936;937 1 KVEEEQEADEEDVSEEEAESK SESAQPLKKVEEEQEA SEEEAESKEGTNKDFP K K V S K E 2 0 0 2 0 1 10 0 0 0 0 2 0 0 0 2 0 0 0 2 0 0 21 1 2437.014 Q9H3N1 Q9H3N1 234 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 3 1.5946E-17 98.133 By MS/MS By MS/MS By matching 1 1 1 203830000 58334000 77752000 67742000 1489 1820 1583 4830;4831;4832 3429;3430 3429 2553;2554 2 KVESLQEEIAFLK LARLDLERKVESLQEE QEEIAFLKKLHEEEIQ R K V L K K 1 0 0 0 0 1 3 0 0 1 2 2 0 1 0 1 0 0 0 1 0 0 13 1 1532.845 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 223 235 VIM Vimentin yes no 3 0.00070806 72.705 By MS/MS By matching 1 1 566520 411840 0 154680 1490 1129 1584 4833;4834 3431 3431 1 KVLSPTAAKPSPFEGK GIKIKKKKKVLSPTAA KPSPFEGKTSTEPSTA K K V G K T 2 0 0 0 0 0 1 1 0 0 1 3 0 1 3 2 1 0 0 1 0 0 16 2 1655.9247 Q96QC0 Q96QC0 310 325 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 3 0.008706 57.788 By MS/MS By matching By matching 1 1 1 5037000 1969900 1720700 1346500 1491 1755 1585 4835;4836;4837 3432 3432 2425 0 KVMDSDEDDDY TTVKFNRRKVMDSDED DSDEDDDY________ R K V D Y - 0 0 0 5 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 0 11 1 1330.4871 K7EQA1;O14737 K7EQA1 77 87 PDCD5 Programmed cell death protein 5 yes no 2 3.9864E-15 143.55 By MS/MS By MS/MS By MS/MS 2 2 2 91130000 30182000 34351000 26597000 1492 950 1586;1587 4838;4839;4840;4841;4842;4843 3433;3434;3435;3436;3437;3438;3439;3440;3441;3442;3443;3444 3444 67 1255 12 KVPQVSTPTLVEVSR ALLVRYTKKVPQVSTP PTLVEVSRNLGKVGSK K K V S R N 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 2 0 0 4 0 0 15 1 1638.9305 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3;CON__P02769 A0A0C4DGB6 438 452 ALB Serum albumin no no 3 5.0133E-17 112.12 By MS/MS By MS/MS By MS/MS 1 1 1 3650800 2317000 767140 566650 + 1493 194;468 1588 4844;4845;4846 3445;3446;3447 3446 3 KVSGVGGTTYEISV SPTRGGVKKVSGVGGT GTTYEISV________ K K V S V - 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 2 2 0 1 3 0 0 14 1 1395.7246 Q9C0B5;Q9ULC8 Q9C0B5 702 715 ZDHHC5;ZDHHC8 Palmitoyltransferase ZDHHC5;Probable palmitoyltransferase ZDHHC8 yes no 2 0.005825 57.174 By MS/MS By matching By matching 1 1 1 6881800 2788000 2267600 1826100 1494 1803 1589 4847;4848;4849 3448 3448 3910 1 KVSSAEGAAKEEPK ________________ GAAKEEPKRRSARLSA R K V P K R 3 0 0 0 0 0 3 1 0 0 0 3 0 0 1 2 0 0 0 1 0 0 14 2 1429.7413 F2Z2W6;F2Z2Y5;H7BXJ5;P05114 F2Z2W6 5 18 HMGN1 Non-histone chromosomal protein HMG-14 yes no 2;3 0.0009727 82.755 By MS/MS By MS/MS By MS/MS 2 3 2 21346000 4639000 7333400 9373700 1495 625 1590 4850;4851;4852;4853;4854;4855;4856 3449;3450;3451;3452;3453;3454 3451 845;846 6 KVTFNGLNQMIVIELGTNPLK ENEITKVRKVTFNGLN ELGTNPLKSSGIENGA R K V L K S 0 0 3 0 0 1 1 2 0 2 3 2 1 1 1 0 2 0 0 2 0 0 21 1 2328.2875 P07585 P07585 167 187 DCN Decorin yes yes 3 0.0013127 49.089 By MS/MS By matching By MS/MS 1 1 2 5384600 2351000 796680 2236900 1496 1119 1591 4857;4858;4859;4860 3455;3456 3456 66;67 92 2 KVVDYSQFQESDDADEDYGR MSRPVRNRKVVDYSQF DADEDYGRDSGPPTKK R K V G R D 1 1 0 5 0 2 2 1 0 0 0 1 0 1 0 2 0 0 2 2 0 0 20 1 2364.9982 Q9H1E3 Q9H1E3 9 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 0 224.12 By MS/MS By MS/MS By MS/MS 2 3 2 634700000 195350000 256970000 182380000 1497 1813 1592 4861;4862;4863;4864;4865;4866;4867 3457;3458;3459;3460;3461;3462;3463;3464 3464 2535 8 KVVDYSQFQESDDADEDYGRDSGPPTK MSRPVRNRKVVDYSQF RDSGPPTKKIRSSPRE R K V T K K 1 1 0 6 0 2 2 2 0 0 0 2 0 1 2 3 1 0 2 2 0 0 27 2 3047.3268 Q9H1E3 Q9H1E3 9 35 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 4 8.6891E-15 85.777 By MS/MS By MS/MS By MS/MS 1 1 1 14676000 6314400 3559300 4802200 1498 1813 1593 4868;4869;4870 3465;3466;3467 3467 2535 3 KVVEAVNSDSDSEFGIPK PKRAPKQKKVVEAVNS DSEFGIPKKTTTPKGK K K V P K K 1 0 1 2 0 0 2 1 0 1 0 2 0 1 1 3 0 0 0 3 0 0 18 1 1919.9476 Q02880 Q02880 1515 1532 TOP2B DNA topoisomerase 2-beta yes yes 2 0.01028 45.083 By MS/MS By matching By MS/MS 1 1 1 6183600 2313300 2292300 1578100 1499 1335 1594 4871;4872;4873 3468;3469 3468 1745;1746;1747 1 KVVVSPTK KAAATSAKKVVVSPTK KVVVSPTKKVAVATPA K K V T K K 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 70 NCL Nucleolin yes no 2 1.2747E-14 152.69 By MS/MS By MS/MS 2 1 92049000 66703000 0 25345000 1500 1175 1595 4874;4875;4876 3470;3471;3472;3473 3471 1526 4 KVVVSPTKK KAAATSAKKVVVSPTK VVVSPTKKVAVATPAK K K V K K V 0 0 0 0 0 0 0 0 0 0 0 3 0 0 1 1 1 0 0 3 0 0 9 2 984.63317 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 63 71 NCL Nucleolin yes no 2;3 1.4197E-76 177.57 By MS/MS By MS/MS By MS/MS 2 2 1 600730000 243700000 223920000 133110000 1501 1175 1596 4877;4878;4879;4880;4881 3474;3475;3476;3477 3475 1526 4 KVYEDSGIPLPAESPK QIKATVKRKVYEDSGI PLPAESPKKGPKKVAS R K V P K K 1 0 0 1 0 0 2 1 0 1 1 2 0 0 3 2 0 0 1 1 0 0 16 1 1728.8934 F8W038;F8W1H0;H0YIS7;Q8IXM2 F8W038 83 98 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 2 0.0034494 60.949 By MS/MS By MS/MS 1 1 8874900 0 4866300 4008600 1502 684 1597 4882;4883 3478;3479 3479 913 2 KWDGSEEDEDNSK GKAQKSNKKWDGSEED EEDEDNSKKIKERSRI K K W S K K 0 0 1 3 0 0 3 1 0 0 0 2 0 0 0 2 0 1 0 0 0 0 13 1 1537.6169 A0A087WUT6;O60841 A0A087WUT6 160 172 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.013049 58.824 By matching By MS/MS By MS/MS 1 2 2 12613000 3496600 5083000 4033500 1503 41 1598 4884;4885;4886;4887;4888 3480;3481 3481 49 1 KWDGSEEDEDNSKK GKAQKSNKKWDGSEED EDEDNSKKIKERSRIN K K W K K I 0 0 1 3 0 0 3 1 0 0 0 3 0 0 0 2 0 1 0 0 0 0 14 2 1665.7118 A0A087WUT6;O60841 A0A087WUT6 160 173 EIF5B Eukaryotic translation initiation factor 5B yes no 2;3 0.0010005 82.709 By MS/MS By matching By MS/MS 2 2 2 6637100 1976500 2949000 1711600 1504 41 1599 4889;4890;4891;4892;4893;4894 3482;3483 3483 49 1 KYNTFHKNASFFK EPGRSGGRKYNTFHKN HKNASFFKKTKILSDS R K Y F K K 1 0 2 0 0 0 0 0 1 0 0 3 0 3 0 1 1 0 1 0 0 0 13 2 1630.8256 Q9NSI6 Q9NSI6 1802 1814 BRWD1 Bromodomain and WD repeat-containing protein 1 yes yes 3 0.0041019 47.712 By matching By MS/MS 1 1 762450 346870 415580 0 1505 1857 1600 4895;4896 3484 3484 107;108 3513;3916 1 KYNVSKISQSK VVKEKEKKKYNVSKIS VSKISQSK________ K K Y S K - 0 0 1 0 0 1 0 0 0 1 0 3 0 0 0 3 0 0 1 1 0 0 11 2 1280.7089 C9J9Z3;C9JFB6;U3KPS7;O95447 C9J9Z3 97 107 LCA5L Lebercilin-like protein yes no 2 0.0062547 59.8 By MS/MS 1 0 0 0 0 1506 421 1601 4897 3485 3485 24 559;560 1 KYVISDEEEEDDD DKANKKHKKYVISDEE DEEEEDDD________ K K Y D D - 0 0 0 4 0 0 4 0 0 1 0 1 0 0 0 1 0 0 1 1 0 0 13 1 1584.6315 Q8WVC0 Q8WVC0 654 666 LEO1 RNA polymerase-associated protein LEO1 yes yes 2 0.0095465 64.798 By MS/MS By matching By matching 1 1 1 51781000 17033000 20272000 14477000 1507 1682 1602 4898;4899;4900 3486 3486 2308 1 KYYTNNFITNLTFR ILFDPDGRKYYTNNFI FITNLTFRTASLWIPG R K Y F R T 0 1 3 0 0 0 0 0 0 1 1 1 0 2 0 0 3 0 2 0 0 0 14 1 1793.9101 Q9UQC9 Q9UQC9 547 560 CLCA2 Calcium-activated chloride channel regulator 2;Calcium-activated chloride channel regulator 2, 109 kDa form;Calcium-activated chloride channel regulator 2, 35 kDa form yes yes 2 0.014728 40.727 By MS/MS 1 885610 885610 0 0 1508 1947 1603 4901 3487 3487 3547;3548 1 LAAAEETAVSPR RVWSLERRLAAAEETA EETAVSPRKSPRPAGP R L A P R K 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 12 0 1213.6303 Q9BUH6 Q9BUH6 139 150 C9orf142 Protein PAXX yes yes 2 5.8656E-64 165.78 By MS/MS By MS/MS By MS/MS 1 1 1 32011000 10430000 11165000 10416000 1509 1783 1604 4902;4903;4904 3488;3489;3490 3489 2476 3 LAAPSVSHVSPR QTSERANKLAAPSVSH SVSHVSPRKNPSVVIK K L A P R K 2 1 0 0 0 0 0 0 1 0 1 0 0 0 2 3 0 0 0 2 0 0 12 0 1219.6673 A0A0U1RRM7;A0A0U1RQW3;Q8WXE1 A0A0U1RRM7 122 133 ATRIP ATR-interacting protein yes no 2;3 0.00062439 83.633 By MS/MS By MS/MS By MS/MS 2 2 2 11044000 3841300 3651300 3551700 1510 255 1605 4905;4906;4907;4908;4909;4910 3491;3492;3493;3494 3492 336;337 4 LAAVTYNGVDNNK YENYRSRKLAAVTYNG YNGVDNNKNKGQLTKS K L A N K N 2 0 3 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 1 2 0 0 13 0 1377.6888 G3V1Q4;E7ES33;E7EPK1;Q16181 G3V1Q4 278 290 SEPT7 Septin-7 yes no 2 0.016564 56.043 By MS/MS By matching By matching 1 1 1 1424800 531340 476660 416790 1511 525 1606 4911;4912;4913 3495 3495 3056 0 LADSGDGAGPSPEEKDFLK TRTSARRRLADSGDGA PEEKDFLKTVEGRELQ R L A L K T 2 0 0 3 0 0 2 3 0 0 2 2 0 1 2 2 0 0 0 0 0 0 19 1 1931.9113 Q92917 Q92917 32 50 GPKOW G patch domain and KOW motifs-containing protein yes yes 3 0.018193 42.382 By MS/MS 1 522410 0 0 522410 1512 1714 1607 4914 3496 3496 2352 1 LAEDEGDSEPEAVGQSR KRKKFPDRLAEDEGDS PEAVGQSRGRRQKK__ R L A S R G 2 1 0 2 0 1 4 2 0 0 1 0 0 0 1 2 0 0 0 1 0 0 17 0 1787.781 Q9UIG0 Q9UIG0 1461 1477 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2;3 1.9731E-11 98.552 By MS/MS By MS/MS By MS/MS 2 3 2 54683000 13640000 28632000 12411000 1513 1907 1608 4915;4916;4917;4918;4919;4920;4921 3497;3498;3499 3499 2690 3 LAEQFVLLNLVYETTDK AENKEIQKLAEQFVLL LVYETTDKHLSPDGQY K L A D K H 1 0 1 1 0 1 2 0 0 0 4 1 0 1 0 0 2 0 1 2 0 0 17 0 1995.0565 C9J3E2;B5MC07;O95994;H7C3Z9 C9J3E2 100 116 AGR2 Anterior gradient protein 2 homolog yes no 2;3 2.0868E-83 161.99 By MS/MS By MS/MS 2 2 40343000 0 18664000 21680000 1514 360 1609 4922;4923;4924;4925 3500;3501;3502;3503 3503 4 LAIQGPEDSPSR RRAEGPPRLAIQGPED GPEDSPSRQSRRYDW_ R L A S R Q 1 1 0 1 0 1 1 1 0 1 1 0 0 0 2 2 0 0 0 0 0 0 12 0 1268.6361 Q15773 Q15773 230 241 MLF2 Myeloid leukemia factor 2 yes yes 2 0.0016086 80.371 By MS/MS By MS/MS By MS/MS 1 1 1 15259000 4896100 6169300 4193900 1515 1451 1610 4926;4927;4928 3504;3505;3506 3506 1944;1945 3 LAKVSHMTSDRR RMDGVLRKLAKVSHMT SHMTSDRRQWCAIAVL K L A R R Q 1 2 0 1 0 0 0 0 1 0 1 1 1 0 0 2 1 0 0 1 0 0 12 2 1399.7354 O60499;O43752 O60499 216 227 STX10;STX6 Syntaxin-10;Syntaxin-6 yes no 2 0.017713 40.994 By matching By MS/MS 1 1 953170 493000 460180 0 1516 1015 1611 4929;4930 3507 3507 1356 1 LALDLEIATYR YQELMNTKLALDLEIA DLEIATYRTLLEGEES K L A Y R T 2 1 0 1 0 0 1 0 0 1 3 0 0 0 0 0 1 0 1 0 0 0 11 0 1276.7027 CON__P04264;P04264 CON__P04264 473 483 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.0034489 84.213 By MS/MS By MS/MS By MS/MS 2 2 2 2952800 1156600 983200 812970 + 1517 469 1612 4931;4932;4933;4934;4935;4936 3508;3509;3510;3511;3512;3513 3510 5 LANNTTVK GSQVINLKLANNTTVK LANNTTVKATVISAAS K L A V K A 1 0 2 0 0 0 0 0 0 0 1 1 0 0 0 0 2 0 0 1 0 0 8 0 859.47633 Q9HCE3 Q9HCE3 470 477 ZNF532 Zinc finger protein 532 yes yes 2 0.017066 53.597 By MS/MS 1 0 0 0 0 1518 1840 1613 4937 3514 3514 3506;3507 1 LAPEYEAAATR PWCGHCKRLAPEYEAA EYEAAATRLKGIVPLA R L A T R L 4 1 0 0 0 0 2 0 0 0 1 0 0 0 1 0 1 0 1 0 0 0 11 0 1190.5932 H7BZJ3;P30101 P30101 63 73 PDIA3 Protein disulfide-isomerase A3 no no 2 0.014802 60.398 By MS/MS 1 608260 0 608260 0 1519 1208;859 1614 4938 3515 3515 1 LAPSPARPR VPASFFRRLAPSPARP APSPARPRHPAEAPNN R L A P R H 2 2 0 0 0 0 0 0 0 0 1 0 0 0 3 1 0 0 0 0 0 0 9 1 963.5614 O14654 O14654 436 444 IRS4 Insulin receptor substrate 4 yes yes 2 0.013356 75.189 By matching By MS/MS By matching 1 1 1 24841000 9155300 9197700 6487800 1520 982 1615 4939;4940;4941 3516 3516 1309 1 LAPVPSPEPQKPAPVSPESVK VPVCESQKLAPVPSPE PVSPESVKATLSNPKP K L A V K A 2 0 0 0 0 1 2 0 0 0 1 2 0 0 7 3 0 0 0 3 0 0 21 1 2153.1732 Q96JM3 Q96JM3 199 219 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.00045366 75.239 By MS/MS By MS/MS By MS/MS 2 1 1 22723000 9390300 7351400 5981000 1521 1743 1616;1617 4942;4943;4944;4945 3517;3518;3519;3520;3521;3522 3519 2406;2407 6 LAQMCGLHIVVHADELEELINYYQDR CVDGKEFRLAQMCGLH LINYYQDRGYFEELIT R L A D R G 2 1 1 2 1 2 3 1 2 2 4 0 1 0 0 0 0 0 2 2 0 0 26 0 3128.5059 J3KS13;A0A087WVQ6;Q00610 J3KS13 205 230 CLTC Clathrin heavy chain;Clathrin heavy chain 1 yes no 4 2.0318E-05 60.939 By MS/MS 1 1530100 0 0 1530100 1522 52 1618 4946 3523 3523 3 1 LASDDRPSPPR HTSMDLPKLASDDRPS DDRPSPPRGLVAAYSG K L A P R G 1 2 0 2 0 0 0 0 0 0 1 0 0 0 3 2 0 0 0 0 0 0 11 1 1209.6102 A0A0A0MR66;P98175 A0A0A0MR66 781 791 RBM10 RNA-binding protein 10 yes no 2 0.00018752 107.34 By matching By MS/MS By MS/MS 1 1 1 12762000 4729700 4474500 3557700 1523 128 1619 4947;4948;4949 3524;3525 3525 171;172 2 LASELAKTPQK KHSEKMAKLASELAKT ELAKTPQKSVSFSLKN K L A Q K S 2 0 0 0 0 1 1 0 0 0 2 2 0 0 1 1 1 0 0 0 0 0 11 1 1184.6765 Q13416 Q13416 109 119 ORC2 Origin recognition complex subunit 2 yes yes 2;3 0.0081738 78.287 By matching By MS/MS By MS/MS 2 2 2 4189500 1359500 1386400 1443500 1524 1389 1620 4950;4951;4952;4953;4954;4955 3526;3527 3526 3364 1 LASPELER SPDVGLLKLASPELER LASPELERLIIQSSNG K L A E R L 1 1 0 0 0 0 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 8 0 913.4869 P05412;P17535 P05412 71 78 JUN;JUND Transcription factor AP-1;Transcription factor jun-D yes no 2 0.011868 84.817 By MS/MS By MS/MS By MS/MS 1 1 1 26851000 8771400 10038000 8042100 1525 1107 1621 4956;4957;4958 3528;3529;3530;3531;3532 3528 1454 5 LASPMKPVPGTPPSSK RPPGGSDKLASPMKPV PGTPPSSKAKSPISSG K L A S K A 1 0 0 0 0 0 0 1 0 0 1 2 1 0 5 3 1 0 0 1 0 0 16 1 1592.8596 Q15648 Q15648 1205 1220 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.0010166 73.498 By MS/MS By matching By matching 1 1 1 2605800 864150 931070 810560 1526 1447 1622 4959;4960;4961 3533 3533 1938;3386 1 LASTSDIEEK VAPTIPRRLASTSDIE STSDIEEKENRDSSSL R L A E K E 1 0 0 1 0 0 2 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 10 0 1091.5346 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 505 514 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.0001038 119.03 By matching By MS/MS By MS/MS 1 1 1 3828300 1002300 1741600 1084500 1527 986 1623 4962;4963;4964 3534;3535 3534 1316;1317 2 LASTSDIEEKENR VAPTIPRRLASTSDIE DIEEKENRDSSSLRTS R L A N R D 1 1 1 1 0 0 3 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 13 1 1490.7213 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 505 517 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.00021535 94.122 By MS/MS By MS/MS By MS/MS 1 1 1 8011000 2863100 2527200 2620700 1528 986 1624 4965;4966;4967 3536;3537;3538 3538 1316;1317 3 LATKSSPVKVGEK SAMKVGEKLATKSSPV SPVKVGEKRKAADETL K L A E K R 1 0 0 0 0 0 1 1 0 0 1 3 0 0 1 2 1 0 0 2 0 0 13 2 1342.782 P49916 P49916 908 920 LIG3 DNA ligase 3 yes yes 3 0.010292 70.54 By matching By matching By MS/MS 1 1 1 3401100 1246600 1050400 1104100 1529 1265 1625 4968;4969;4970 3539 3539 1673 1 LATNTSAPDLK STTPRLSRLATNTSAP NTSAPDLKNVRSKVGS R L A L K N 2 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 0 0 0 11 0 1129.5979 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4;B5MEG9 E7EVA0 2068 2078 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 9.4394E-06 113.99 By MS/MS By MS/MS By MS/MS 1 1 1 8724100 2836400 3071300 2816500 1530 551 1626 4971;4972;4973 3540;3541;3542 3540 729 3 LAVEALSSLDGDLAGR GERRAIEKLAVEALSS LDGDLAGRYYALKSMT K L A G R Y 3 1 0 2 0 0 1 2 0 0 4 0 0 0 0 2 0 0 0 1 0 0 16 0 1585.8312 G3V4N7;P12277 G3V4N7 157 172 CKB Creatine kinase B-type yes no 2 0.0033794 66.498 By MS/MS By MS/MS By matching 1 1 1 1237800 428750 598780 210300 1531 722 1627 4974;4975;4976 3543;3544 3543 2 LCAGIMITASHNPK PFTVSHLKLCAGIMIT ITASHNPKQDNGYKVY K L C P K Q 2 0 1 0 1 0 0 1 1 2 1 1 1 0 1 1 1 0 0 0 0 0 14 0 1511.7589 Q96G03 Q96G03 156 169 PGM2 Phosphoglucomutase-2 yes yes 2 0.013226 48.277 By matching By MS/MS 1 1 3347500 1913800 1433700 0 1532 1734 1628 4977;4978 3545 3545 3477 1 LCDDGPQLPTSPR VSREPRLRLCDDGPQL PQLPTSPRLTAAARSA R L C P R L 0 1 0 2 1 1 0 1 0 0 2 0 0 0 3 1 1 0 0 0 0 0 13 0 1454.6824 H0YAZ3;H0YB51;O60504 H0YAZ3 32 44 SORBS3 Vinexin yes no 2 8.9499E-05 89.231 By MS/MS By MS/MS 1 1 13139000 0 6802300 6337000 1533 779 1629 4979;4980 3546;3547 3547 1065;3169 2 LCDFGSASHVADNDITPYLVSR NESKTILKLCDFGSAS ITPYLVSRFYRAPEII K L C S R F 2 1 1 3 1 0 0 1 1 1 2 0 0 1 1 3 1 0 1 2 0 0 22 0 2436.138 Q13523;H0YDJ3 Q13523 832 853 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 3 0.0060494 43.115 By MS/MS By matching By MS/MS 1 1 1 6877700 3740300 1132600 2004700 1534 1392 1630 4981;4982;4983 3548;3549 3548 3835 2 LCNFAFKTKGNLTK DVRPYVCKLCNFAFKT KTKGNLTKHMKSKAHM K L C T K H 1 0 2 0 1 0 0 1 0 0 2 3 0 2 0 0 2 0 0 0 0 0 14 2 1640.8708 P31629 P31629 1831 1844 HIVEP2 Transcription factor HIVEP2 yes yes 2 0.013458 48.284 By MS/MS 1 0 0 0 0 1535 1212 1631 4984 3550 3550 3312 1 LCYVALDFEQEMATAASSSSLEK IVRDIKEKLCYVALDF ASSSSLEKSYELPDGQ K L C E K S 4 0 0 1 1 1 3 0 0 0 3 1 1 1 0 4 1 0 1 1 0 0 23 0 2549.1666 P63261;P60709;Q6S8J3;I3L4N8 P63261 216 238 ACTG1;ACTB;POTEE Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E yes no 2;3 6.3571E-12 90.367 By MS/MS By MS/MS By MS/MS 1 2 2 34690000 13260000 9629900 11800000 1536 1305 1632 4985;4986;4987;4988;4989 3551;3552;3553;3554 3552 4 LDGENIYIR MRKKKRERLDGENIYI DGENIYIRHSNLMLED R L D I R H 0 1 1 1 0 0 1 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 9 0 1091.5611 P11171;Q4VB86 P11171 654 662 EPB41 Protein 4.1 yes no 2 0.0024515 103.83 By MS/MS By MS/MS By MS/MS 1 1 1 21111000 6669900 7778800 6662100 1537 1143 1633 4990;4991;4992 3555;3556;3557 3555 3767 3 LDIDSPPITAR TFLEHMCRLDIDSPPI DSPPITARNTGIICTI R L D A R N 1 1 0 2 0 0 0 0 0 2 1 0 0 0 2 1 1 0 0 0 0 0 11 0 1196.6401 B4DNK4;P14618;H3BTN5;H3BQ34;H3BN34;H3BQZ3;H3BU13;H3BT25;H3BUW1;H3BTJ2 B4DNK4 33 43 PKM Pyruvate kinase;Pyruvate kinase PKM yes no 2 0.010763 56.951 By MS/MS By MS/MS By matching 1 1 1 4596400 1418200 1629700 1548500 1538 345 1634 4993;4994;4995 3558;3559 3559 473 2 LDLAAYDQEGRR VSSHRNPRLDLAAYDQ AYDQEGRRFDNFSSLS R L D R R F 2 2 0 2 0 1 1 1 0 0 2 0 0 0 0 0 0 0 1 0 0 0 12 1 1405.695 Q8TEM1 Q8TEM1 787 798 NUP210 Nuclear pore membrane glycoprotein 210 yes yes 3 0.016395 33.542 By MS/MS 1 1151100 1151100 0 0 1539 1677 1635 4996 3560 3560 0 LDQPVSAPPSPR EKRILQEKLDQPVSAP VSAPPSPRDISMEIDS K L D P R D 1 1 0 1 0 1 0 0 0 0 1 0 0 0 4 2 0 0 0 1 0 0 12 0 1262.6619 Q16204 Q16204 235 246 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 0.00037481 97.073 By MS/MS By MS/MS By MS/MS 2 2 2 23985000 9013200 8773100 6198800 1540 1454 1636;1637 4997;4998;4999;5000;5001;5002 3561;3562;3563;3564;3565;3566;3567;3568;3569 3568 1948;1949 9 LDSNLMIR RRTLQEHRLDSNLMIR LDSNLMIRLPDRPLKP R L D I R L 0 1 1 1 0 0 0 0 0 1 2 0 1 0 0 1 0 0 0 0 0 0 8 0 960.50625 A0A0J9YW40;Q6IEE7 A0A0J9YW40 290 297 TMEM132E Transmembrane protein 132E yes no 2 0.015039 54.066 By MS/MS 1 0 0 0 0 1541 236 1638 5003 3570 3570 320 1 LDSQPQETSPELPR HVTEGIPRLDSQPQET ETSPELPRRRVRHQGD R L D P R R 0 1 0 1 0 2 2 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 14 0 1595.7791 O14545 O14545 407 420 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes yes 2;3 2.9243E-21 139.86 By MS/MS By MS/MS By MS/MS 2 2 2 37264000 11381000 13446000 12438000 1542 980 1639 5004;5005;5006;5007;5008;5009 3571;3572;3573;3574;3575;3576;3577 3571 1303;3233 7 LDSSPSVSSTLAAK QASKATPKLDSSPSVS VSSTLAAKDDPDGKQE K L D A K D 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 1 0 0 14 0 1361.7038 J3KQ96;E7ETY2;Q13428 J3KQ96 1187 1200 TCOF1 Treacle protein yes no 2 5.4277E-12 111.83 By MS/MS By MS/MS By MS/MS 1 1 1 14481000 3711900 6444200 4325400 1543 545 1640 5010;5011;5012 3578;3579;3580;3581 3579 710;711 4 LDSSPVSSPR FGPNKMMRLDSSPVSS SSPVSSPRKHSAELIA R L D P R K 0 1 0 1 0 0 0 0 0 0 1 0 0 0 2 4 0 0 0 1 0 0 10 0 1043.5247 O60293 O60293 946 955 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 0.0011902 90.913 By MS/MS By MS/MS 1 1 0 0 0 0 1544 1018 1641 5013;5014 3582;3583 3582 1359;1360 2 LDTVGSDAYRLSVSR RYHSGDVRLDTVGSDA AYRLSVSRALSADQGS R L D S R A 1 2 0 2 0 0 0 1 0 0 2 0 0 0 0 3 1 0 1 2 0 0 15 1 1637.8373 Q9P2B2 Q9P2B2 222 236 PTGFRN Prostaglandin F2 receptor negative regulator yes yes 2 0.018822 44.294 By MS/MS 1 0 0 0 0 1545 1892 1642 5015 3584 3584 2668;2669;3525 1 LDYCGGSGEPGGVQR RKLRAMCRLDYCGGSG GEPGGVQRAFSASSAS R L D Q R A 0 1 0 1 1 1 1 5 0 0 1 0 0 0 1 1 0 0 1 1 0 0 15 0 1550.6784 Q15464 Q15464 112 126 SHB SH2 domain-containing adapter protein B yes yes 2 0.003011 64.121 By MS/MS By MS/MS By MS/MS 1 1 1 3371600 1436300 1070400 864940 1546 1441 1643 5016;5017;5018 3585;3586;3587 3586 3850 3 LEASTSDPLPAR PGSNRKLRLEASTSDP TSDPLPARGGSALPGS R L E A R G 2 1 0 1 0 0 1 0 0 0 2 0 0 0 2 2 1 0 0 0 0 0 12 0 1255.6408 A5PKW4 A5PKW4 151 162 PSD PH and SEC7 domain-containing protein 1 yes yes 2 0.0019173 77.677 By MS/MS By MS/MS By MS/MS 1 1 1 3019600 985770 1090700 943130 1547 303 1644 5019;5020;5021 3588;3589;3590 3589 402;403;2972 3 LEELENLVSSLR DVKELLSRLEELENLV ENLVSSLREQCTAGAG R L E L R E 0 1 1 0 0 0 3 0 0 0 4 0 0 0 0 2 0 0 0 1 0 0 12 0 1400.7511 F5H7V9;E9PC84;J3QSU6;P24821 F5H7V9 126 137 TNC Tenascin yes no 2 5.8913E-08 121.6 By MS/MS By MS/MS By MS/MS 1 1 1 2875200 1596100 545680 733390 1548 563 1645 5022;5023;5024 3591;3592;3593 3591 3 LEEPPELNRQSPNPR LVPNGFSKLEEPPELN NRQSPNPRRGHAVPPT K L E P R R 0 2 2 0 0 1 3 0 0 0 2 0 0 0 4 1 0 0 0 0 0 0 15 1 1774.8962 Q7Z5L9 Q7Z5L9 165 179 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.0018348 67.118 By MS/MS By MS/MS By MS/MS 1 1 1 40575000 15322000 14041000 11212000 1549 1584 1646 5025;5026;5027 3594;3595;3596;3597 3594 2158 4 LEESLEYQQFVANVEEEEAWINEK LAAARGQRLEESLEYQ EEAWINEKMTLVASED R L E E K M 2 0 2 0 0 2 8 0 0 1 2 1 0 1 0 1 0 1 1 2 0 0 24 0 2925.3556 A0A0D9SF54;A0A0D9SGF6;Q13813 A0A0D9SF54 1851 1874 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 3 0.0051755 47.05 By MS/MS 1 5530500 0 5530500 0 1550 212 1647 5028 3598 3598 14 0 LEGLTDEINFLR NKVELESRLEGLTDEI TDEINFLRQLYEKEIR R L E L R Q 0 1 1 1 0 0 2 1 0 1 3 0 0 1 0 0 1 0 0 0 0 0 12 0 1418.7405 CON__H-INV:HIT000292931;CON__P05787;P05787;F8VP67;F8VUG2;F8W1U3 CON__H-INV:HIT000292931 174 185 KRT8 Keratin, type II cytoskeletal 8 yes no 2 0.0006088 92.239 By MS/MS By MS/MS By MS/MS 1 1 1 1720200 856500 262100 601630 + 1551 461 1648 5029;5030;5031 3599;3600;3601 3599 3 LEGVDGGQSPR ADEDLIFRLEGVDGGQ VDGGQSPRAGHDGDSD R L E P R A 0 1 0 1 0 1 1 3 0 0 1 0 0 0 1 1 0 0 0 1 0 0 11 0 1113.5415 H3BRH4;O00418 H3BRH4 10 20 EEF2K Eukaryotic elongation factor 2 kinase yes no 2 0.018845 59.116 By MS/MS 1 0 0 0 0 1552 840 1649 5032 3602 3602 1129 1 LEHLYLNNNSIEK SVPAINNRLEHLYLNN LNNNSIEKINGTQICP R L E E K I 0 0 3 0 0 0 2 0 1 1 3 1 0 0 0 1 0 0 1 0 0 0 13 0 1585.81 P51888 P51888 313 325 PRELP Prolargin yes yes 3 0.0041301 38.199 By MS/MS By matching 1 1 1364100 1014100 350020 0 1553 1281 1650 5033;5034 3603 3603 1 LENLLLLDLQHNR IPPGVFSKLENLLLLD LLDLQHNRLSDGVFKP K L E N R L 0 1 2 1 0 1 1 0 1 0 6 0 0 0 0 0 0 0 0 0 0 0 13 0 1589.8889 P51888 P51888 194 206 PRELP Prolargin yes yes 3 2.512E-08 108.68 By MS/MS By matching By matching 1 1 1 5061300 2745000 1268000 1048300 1554 1281 1651 5035;5036;5037 3604 3604 1 LEPLGETHHNDFYR PKVTRLPKLEPLGETH THHNDFYRKPLPPLAV K L E Y R K 0 1 1 1 0 0 2 1 2 0 2 0 0 1 1 0 1 0 1 0 0 0 14 0 1726.8063 Q3SXY8 Q3SXY8 394 407 ARL13B ADP-ribosylation factor-like protein 13B yes yes 3 0.0023214 56.951 By matching By MS/MS By matching 1 1 1 2337000 889850 768840 678320 1555 1468 1652 5038;5039;5040 3605 3605 3855 1 LESLNIQR TIEERKERLESLNIQR LESLNIQREKEELEQR R L E Q R E 0 1 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 0 8 0 971.53999 Q14152 Q14152 582 589 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.012361 93.598 By matching By MS/MS By matching 1 1 1 1965800 778760 531450 655610 1556 1403 1653 5041;5042;5043 3606 3606 1855 1 LEVSYQGLDIENQR ASFKKTERLEVSYQGL GLDIENQRLQKTLENS R L E Q R L 0 1 1 1 0 2 2 1 0 1 2 0 0 0 0 1 0 0 1 1 0 0 14 0 1662.8213 A0A087WXD9;Q3V6T2 A0A087WXD9 679 692 CCDC88A Girdin yes no 2 0.0097505 41.283 By MS/MS 1 373710 373710 0 0 1557 70 1654 5044 3607 3607 88;3579 1 LEVTEIVKPSPK SSSMKISKLEVTEIVK EIVKPSPKRKMEPDTE K L E P K R 0 0 0 0 0 0 2 0 0 1 1 2 0 0 2 1 1 0 0 2 0 0 12 1 1338.7759 Q7Z6E9 Q7Z6E9 1170 1181 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes yes 2 0.0068693 70.889 By MS/MS By matching By matching 1 1 1 4395500 1747800 1287100 1360700 1558 1586 1655 5045;5046;5047 3608 3608 2163 1 LFAVAPNQNLK RAREEGIRLFAVAPNQ VAPNQNLKEQGLRDIA R L F L K E 2 0 2 0 0 1 0 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 11 0 1213.6819 P12110 P12110 187 197 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.014132 60.973 By MS/MS 1 1323300 1323300 0 0 1559 1150 1656 5048 3609 3609 1 LFIGGLNTETNEK VEADRPGKLFIGGLNT LNTETNEKALEAVFGK K L F E K A 0 0 2 0 0 0 2 2 0 1 2 1 0 1 0 0 2 0 0 0 0 0 13 0 1434.7355 P38159;H3BNC1;H3BR27;A0A1B0GUK8;H0Y6E7;H3BT71;Q96E39 P38159 10 22 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 yes no 2 0.016837 55.567 By MS/MS 1 313690 0 313690 0 1560 1227 1657 5049 3610 3610 1 LFIGGLSFETTDESLR KEPEQLRKLFIGGLSF ETTDESLRSHFEQWGT K L F L R S 0 1 0 1 0 0 2 2 0 1 3 0 0 2 0 2 2 0 0 0 0 0 16 0 1783.8992 F8W6I7;P09651;F8VTQ5;F8W646;F8VZ49;Q32P51 F8W6I7 16 31 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 2 0.017677 48.659 By matching By matching By MS/MS 1 1 1 4744800 1917000 1463100 1364700 1561 686 1658 5050;5051;5052 3611 3611 1 LFIGGLSFETTEESLR REKEQFRKLFIGGLSF ETTEESLRNYYEQWGK K L F L R N 0 1 0 0 0 0 3 2 0 1 3 0 0 2 0 2 2 0 0 0 0 0 16 0 1797.9149 P22626;A0A087WUI2 P22626 23 38 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 0.0017148 73.466 By MS/MS By MS/MS 1 1 4005700 2766300 1239400 0 1562 1188 1659 5053;5054 3612;3613 3612 2 LFQQIYSDGSDEVKR EGDAALNRLFQQIYSD DGSDEVKRAMNKSFME R L F K R A 0 1 0 2 0 2 1 1 0 1 1 1 0 1 0 2 0 0 1 1 0 0 15 1 1783.8741 Q9Y2Z0 Q9Y2Z0 312 326 SUGT1 Suppressor of G2 allele of SKP1 homolog yes yes 2;3 1.717E-07 97.631 By MS/MS By matching By matching 2 1 1 6483600 3731100 1390300 1362200 1563 1962 1660 5055;5056;5057;5058 3614;3615 3614 2806;3937 2 LFRPPSPAPAAPGAR PAGSRSGRLFRPPSPA APAAPGARLLRLPGSG R L F A R L 4 2 0 0 0 0 0 1 0 0 1 0 0 1 5 1 0 0 0 0 0 0 15 1 1503.831 Q86U90 Q86U90 32 46 YRDC YrdC domain-containing protein, mitochondrial yes yes 3 0.001954 66.261 By MS/MS By MS/MS By matching 1 1 1 11970000 4379400 4474500 3116300 1564 1592 1661 5059;5060;5061 3616;3617 3617 2173 2 LFSLSNPSLSTTNLSGPSR SALHPSLRLFSLSNPS TNLSGPSRRRQPPVSP R L F S R R 0 1 2 0 0 0 0 1 0 0 4 0 0 1 2 6 2 0 0 0 0 0 19 0 1977.0167 Q6UUV7 Q6UUV7 366 384 CRTC3 CREB-regulated transcription coactivator 3 yes yes 2 0.016906 44.44 By matching By MS/MS By matching 1 1 1 2272200 1154500 406260 711500 1565 1559 1662 5062;5063;5064 3618 3618 2118 1 LFSQGQDVSNK LTFKERQRLFSQGQDV QGQDVSNKVKASRKLT R L F N K V 0 0 1 1 0 2 0 1 0 0 1 1 0 1 0 2 0 0 0 1 0 0 11 0 1221.599 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1754 1764 MLLT4 Afadin yes no 2 0.00068659 96.23 By MS/MS By MS/MS By MS/MS 1 1 1 34053000 13207000 11761000 9085000 1566 316 1663 5065;5066;5067 3619;3620;3621 3621 419 3 LFSQGQDVSNKVK LTFKERQRLFSQGQDV QDVSNKVKASRKLTEL R L F V K A 0 0 1 1 0 2 0 1 0 0 1 2 0 1 0 2 0 0 0 2 0 0 13 1 1448.7623 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1754 1766 MLLT4 Afadin yes no 2 3.2631E-11 111.83 By MS/MS 1 6361000 6361000 0 0 1567 316 1664 5068 3622 3622 419 1 LFYADHPFIFLVR REELRSPKLFYADHPF HPFIFLVRDTQSGSLL K L F V R D 1 1 0 1 0 0 0 0 1 1 2 0 0 3 1 0 0 0 1 1 0 0 13 0 1636.8766 P50454;E9PKH2;H0YEP8 P50454 381 393 SERPINH1 Serpin H1 yes no 3 0.00013474 83.182 By MS/MS By matching By MS/MS 1 1 2 2673100 1566200 626840 480110 1568 1269 1665 5069;5070;5071;5072 3623;3624 3623 2 LGAAPEEESAYVAGEK PFAGGGYRLGAAPEEE SAYVAGEKRQHSSQDV R L G E K R 4 0 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 16 0 1619.7679 F2Z2K0;Q9UNZ2 F2Z2K0 157 172 NSFL1C NSFL1 cofactor p47 yes no 2 7.6981E-12 105.36 By MS/MS By MS/MS By MS/MS 1 1 1 13496000 3494700 5748500 4252700 1569 622 1666 5073;5074;5075 3625;3626;3627;3628;3629;3630 3626 842;3683 6 LGAAPEEESAYVAGEKR PFAGGGYRLGAAPEEE AYVAGEKRQHSSQDVH R L G K R Q 4 1 0 0 0 0 4 2 0 0 1 1 0 0 1 1 0 0 1 1 0 0 17 1 1775.869 F2Z2K0;Q9UNZ2 F2Z2K0 157 173 NSFL1C NSFL1 cofactor p47 yes no 2;3 5.4062E-83 160.79 By MS/MS By MS/MS By MS/MS 2 2 2 151210000 59220000 50231000 41755000 1570 622 1667 5076;5077;5078;5079;5080;5081 3631;3632;3633;3634;3635;3636 3634 842;3683 6 LGAGEGGEASVSPEK PRSKKKKKLGAGEGGE EASVSPEKTSTTSKGK K L G E K T 2 0 0 0 0 0 3 4 0 0 1 1 0 0 1 2 0 0 0 1 0 0 15 0 1386.6627 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1343 TCOF1 Treacle protein yes no 2 2.1458E-70 159.64 By MS/MS By MS/MS By MS/MS 1 1 1 18799000 6478200 6900100 5420600 1571 545 1668 5082;5083;5084 3637;3638;3639 3639 707 3 LGAGEGGEASVSPEKTSTTSK PRSKKKKKLGAGEGGE EKTSTTSKGKAKRDKA K L G S K G 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 4 3 0 0 1 0 0 21 1 1991.9647 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1349 TCOF1 Treacle protein yes no 3 9.1152E-09 85.046 By MS/MS By MS/MS By MS/MS 1 1 1 82632000 34355000 26057000 22220000 1572 545 1669 5085;5086;5087 3640;3641;3642 3641 707 3 LGAGEGGEASVSPEKTSTTSKGK PRSKKKKKLGAGEGGE TSTTSKGKAKRDKASG K L G G K A 2 0 0 0 0 0 3 5 0 0 1 3 0 0 1 4 3 0 0 1 0 0 23 2 2177.0812 J3KQ96;E7ETY2;Q13428 J3KQ96 1329 1351 TCOF1 Treacle protein yes no 3 0.0053456 55.337 By matching By matching By MS/MS 1 1 1 7093500 2215700 2326200 2551600 1573 545 1670 5088;5089;5090 3643 3643 707 1 LGAGGGSPEKSPSAQELK EEKEGGARLGAGGGSP SPSAQELKEQGNRLFV R L G L K E 2 0 0 0 0 1 2 4 0 0 2 2 0 0 2 3 0 0 0 0 0 0 18 1 1711.8741 H3BS86;Q9UNE7 H3BS86 13 30 STUB1 E3 ubiquitin-protein ligase CHIP yes no 2;3 7.9224E-11 97.621 By MS/MS By MS/MS By MS/MS 4 4 4 308880000 100340000 116340000 92191000 1574 844 1671;1672 5091;5092;5093;5094;5095;5096;5097;5098;5099;5100;5101;5102 3644;3645;3646;3647;3648;3649;3650;3651;3652 3652 1135;1136 9 LGAGGGSPEKSPSAQELKEQGNR EEKEGGARLGAGGGSP ELKEQGNRLFVGRKYP R L G N R L 2 1 1 0 0 2 3 5 0 0 2 2 0 0 2 3 0 0 0 0 0 0 23 2 2296.1408 H3BS86;Q9UNE7 H3BS86 13 35 STUB1 E3 ubiquitin-protein ligase CHIP yes no 3 1.5758E-44 117.11 By MS/MS 1 39113000 39113000 0 0 1575 844 1673 5103 3653 3653 1135;1136 1 LGASNSPGQPNSVK PKIGLSLKLGASNSPG PGQPNSVKRKKLPVDS K L G V K R 1 0 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 14 0 1354.6841 P49756 P49756 672 685 RBM25 RNA-binding protein 25 yes yes 2 0 228.11 By MS/MS By MS/MS By MS/MS 2 1 2 65524000 23129000 26429000 15966000 1576 1259 1674;1675 5104;5105;5106;5107;5108 3654;3655;3656;3657;3658;3659 3654 74 1654 6 LGASNSPGQPNSVKR PKIGLSLKLGASNSPG GQPNSVKRKKLPVDSV K L G K R K 1 1 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 0 15 1 1510.7852 P49756 P49756 672 686 RBM25 RNA-binding protein 25 yes yes 2;3 4.1536E-18 116.04 By MS/MS By MS/MS By MS/MS 2 2 2 16859000 5997600 4089400 6772400 1577 1259 1676 5109;5110;5111;5112;5113;5114 3660;3661;3662;3663 3662 1654 4 LGDSSLSR RRREEERRLGDSSLSR LGDSSLSRKDSRWGDR R L G S R K 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 3 0 0 0 0 0 0 8 0 833.4243 Q14152 Q14152 878 885 EIF3A Eukaryotic translation initiation factor 3 subunit A yes yes 2 0.0053839 97.472 By MS/MS By MS/MS By MS/MS 2 2 2 3135600 584400 1369700 1181500 1578 1403 1677 5115;5116;5117;5118;5119;5120 3664;3665;3666;3667;3668;3669;3670;3671 3665 1856;1857 8 LGDVYVNDAFGTAHR AFRASLSKLGDVYVND DAFGTAHRAHSSMVGV K L G H R A 2 1 1 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 1 2 0 0 15 0 1633.7849 P00558;P07205 P00558 157 171 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 yes no 3 0.0064849 58.071 By MS/MS By matching 1 1 1305900 369830 936100 0 1579 1081 1678 5121;5122 3672 3672 1 LGEASDSELADADK TSLLRRARLGEASDSE SELADADKASVASEVS R L G D K A 3 0 0 3 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 0 14 0 1419.6365 H0Y2V6;Q5SW79 H0Y2V6 1072 1085 CEP170 Centrosomal protein of 170 kDa yes no 2 0.00065853 81.128 By MS/MS By MS/MS By MS/MS 1 1 1 5984700 1616400 2567600 1800600 1580 743 1679 5123;5124;5125 3673;3674;3675 3673 1010 3 LGEHNIDVLEGNEQFINAAK YKSRIQVRLGEHNIDV EQFINAAKIITHPNFN R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 3 5.1457E-09 73.448 By matching By MS/MS By MS/MS 1 1 1 15956000 311960 5093300 10551000 + 1581 462 1680 5126;5127;5128 3676;3677 3677 2 LGELVVGPYDNTVVLEELR HPTGDDRRLGELVVGP TVVLEELRAGTTYKVN R L G L R A 0 1 1 1 0 0 3 2 0 0 4 0 0 0 1 0 1 0 1 4 0 0 19 0 2114.1259 D6RGG3;Q99715 D6RGG3 1130 1148 COL12A1 Collagen alpha-1(XII) chain yes no 2 8.5557E-08 88.092 By MS/MS By matching By MS/MS 1 1 1 17064000 7797000 4545200 4721500 1582 497 1681 5129;5130;5131 3678;3679 3679 2 LGEYEDVSR VIDHSGARLGEYEDVS GEYEDVSRVEKYTISQ R L G S R V 0 1 0 1 0 0 2 1 0 0 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1066.4931 K7EP07;K7EK42;Q99426;K7EL99 K7EP07 44 52 TBCB Tubulin-folding cofactor B yes no 2 0.0022565 120.87 By MS/MS By MS/MS By MS/MS 1 1 1 23105000 9215800 8095100 5794500 1583 938 1682 5132;5133;5134 3680;3681;3682 3681 3730 3 LGEYEDVSRVEK VIDHSGARLGEYEDVS EDVSRVEKYTISQEAY R L G E K Y 0 1 0 1 0 0 3 1 0 0 1 1 0 0 0 1 0 0 1 2 0 0 12 1 1422.6991 K7EP07;K7EK42;Q99426 K7EP07 44 55 TBCB Tubulin-folding cofactor B yes no 2;3 1.1607E-80 175.74 By MS/MS By MS/MS By MS/MS 2 2 2 61351000 24601000 20410000 16340000 1584 938 1683 5135;5136;5137;5138;5139;5140 3683;3684;3685;3686;3687;3688 3685 3730 6 LGGLRPESPESLTSVSR TPLRRSRRLGGLRPES ESLTSVSRTRRALVEF R L G S R T 0 2 0 0 0 0 2 2 0 0 3 0 0 0 2 4 1 0 0 1 0 0 17 1 1783.9428 Q9H6F5;H0YG79 Q9H6F5 11 27 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 0.00159 66.826 By MS/MS By MS/MS By matching 1 1 1 20999000 7197900 6913000 6888500 1585 1825 1684 5141;5142;5143 3689;3690 3690 2560 2 LGHGDNTTQLK WGLGEYGRLGHGDNTT GDNTTQLKPKMVKVLL R L G L K P 0 0 1 1 0 1 0 2 1 0 2 1 0 0 0 0 2 0 0 0 0 0 11 0 1182.5993 A0A0J9YVP0;O95714 A0A0J9YVP0 378 388 HERC2 E3 ubiquitin-protein ligase HERC2 yes no 2 0.014914 52.255 By MS/MS 1 885930 0 0 885930 1586 233 1685 5144 3691 3691 2948;2949 0 LGIHEDSTNR EAFSKNLKLGIHEDST IHEDSTNRRRLSELLR K L G N R R 0 1 1 1 0 0 1 1 1 1 1 0 0 0 0 1 1 0 0 0 0 0 10 0 1140.5523 P08238 P08238 439 448 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 0.012038 47.706 By matching By MS/MS By matching 1 1 1 1187400 401930 570520 214960 1587 1126 1686 5145;5146;5147 3692 3692 1 LGLGTLSSSLSR ACCRDYQRLGLGTLSS TLSSSLSRAKSEPFRI R L G S R A 0 1 0 0 0 0 0 2 0 0 4 0 0 0 0 4 1 0 0 0 0 0 12 0 1189.6667 G5E933;O95248 G5E933 1134 1145 SBF1 Myotubularin-related protein 5 yes no 2 4.2506E-08 122.46 By MS/MS By MS/MS By MS/MS 2 2 2 6275500 2329400 2089200 1856900 1588 733 1687 5148;5149;5150;5151;5152;5153 3693;3694;3695;3696;3697 3693 989;990;991;3151 5 LGMLSPEGTCK NTSVQFLRLGMLSPEG LSPEGTCKAFDTAGNG R L G C K A 0 0 0 0 1 0 1 2 0 0 2 1 1 0 1 1 1 0 0 0 0 0 11 0 1191.5628 A0A0U1RQF0;P49327 A0A0U1RQF0 203 213 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 0.0066102 65.695 By matching By matching By MS/MS 1 1 1 2901700 1057800 1021800 822040 1589 249 1688 5154;5155;5156 3698 3698 333 1 LGQDRFQSYISR ALQQIGERLGQDRFQS RFQSYISRLPSALRRH R L G S R L 0 2 0 1 0 2 0 1 0 1 1 0 0 1 0 2 0 0 1 0 0 0 12 1 1468.7423 G3XAE9;Q9Y4F4 G3XAE9 287 298 FAM179B Protein FAM179B yes no 2 0.014696 45.257 By MS/MS 1 0 0 0 0 1590 730 1689 5157 3699 3699 985;3701 1 LGRGSVSDCSDGTSELEEPLGEDPR FSAVVARRLGRGSVSD EPLGEDPRARPPGPPD R L G P R A 0 2 0 3 1 0 4 4 0 0 3 0 0 0 2 4 1 0 0 1 0 0 25 1 2661.1824 P50548 P50548 181 205 ERF ETS domain-containing transcription factor ERF yes yes 3 1.6627E-06 59.547 By MS/MS By matching 1 1 1941400 1071500 0 869880 1591 1270 1690 5158;5159 3700 3700 1677 0 LGSFEGLVNLTFIHLQHNR LTHNKITKLGSFEGLV FIHLQHNRLKEDAVSA K L G N R L 0 1 2 0 0 1 1 2 2 1 4 0 0 2 0 1 1 0 0 1 0 0 19 0 2194.1647 P51884 P51884 152 170 LUM Lumican yes yes 3;4 4.6395E-70 152.94 By MS/MS By MS/MS By MS/MS 2 2 2 24325000 9047500 6619200 8658800 1592 1280 1691 5160;5161;5162;5163;5164;5165 3701;3702;3703;3704;3705;3706;3707 3702 79;133 7 LGSFGSITR GDFLGRERLGSFGSIT GSFGSITRQQEGEASS R L G T R Q 0 1 0 0 0 0 0 2 0 1 1 0 0 1 0 2 1 0 0 0 0 0 9 0 936.50288 Q14315 Q14315 2231 2239 FLNC Filamin-C yes yes 2 0.0084502 70.412 By MS/MS By MS/MS 1 1 11319000 5650900 0 5668500 1593 1410 1692 5166;5167 3708;3709;3710 3709 1880 3 LGSLSARSDSEATISR LAQPRRTRLGSLSARS DSEATISRSSASSRTA R L G S R S 2 2 0 1 0 0 1 1 0 1 2 0 0 0 0 5 1 0 0 0 0 0 16 1 1648.838 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1122 1137 CEP170 Centrosomal protein of 170 kDa yes no 2;3 0.0015655 62.69 By MS/MS By MS/MS By MS/MS 2 2 2 34304000 12096000 11528000 10681000 1594 743 1693;1694 5168;5169;5170;5171;5172;5173 3711;3712;3713;3714 3712 1011;1012;1013 3 LGSPLAVDEALR SQSDTKDRLGSPLAVD LAVDEALRRSDLVEEF R L G L R R 2 1 0 1 0 0 1 1 0 0 3 0 0 0 1 1 0 0 0 1 0 0 12 0 1239.6823 Q7RTP6 Q7RTP6 1308 1319 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes yes 2 0.013714 53.683 By matching By MS/MS By matching 1 1 1 1615700 500890 526270 588490 1595 1575 1695 5174;5175;5176 3715 3715 2145 1 LGSQHSPGR DYMTSPARLGSQHSPG GSQHSPGRTASLNQRP R L G G R T 0 1 0 0 0 1 0 2 1 0 1 0 0 0 1 2 0 0 0 0 0 0 9 0 937.47298 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 220 228 ABI1 Abl interactor 1 yes no 2 0.007825 76.522 By MS/MS By matching By matching 1 1 1 12953000 3848200 6044100 3060300 1596 141 1696 5177;5178;5179 3716 3716 191 1 LGSSGLGSASSIQAAVR KKAKQTGRLGSSGLGS SSIQAAVRQLEAEADA R L G V R Q 3 1 0 0 0 1 0 3 0 1 2 0 0 0 0 5 0 0 0 1 0 0 17 0 1559.8267 Q7Z6Z7;H0Y659 Q7Z6Z7 3750 3766 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 2 0.0062489 51.265 By MS/MS By MS/MS By matching 1 1 1 3724700 1214000 1177500 1333200 1597 1587 1697 5180;5181;5182 3717;3718 3718 2165 2 LGSVDSFER GANRMRGRLGSVDSFE GSVDSFERSNSLASEK R L G E R S 0 1 0 1 0 0 1 1 0 0 1 0 0 1 0 2 0 0 0 1 0 0 9 0 1008.4876 O60343;Q5JU47 O60343 586 594 TBC1D4 TBC1 domain family member 4 yes no 2 0.0080191 77.288 By matching By matching By MS/MS 1 1 1 22909000 8175200 7805700 6928100 1598 1021 1698 5183;5184;5185 3719 3719 1366 1 LGSYSGPTSVSR AEGTRRDRLGSYSGPT SGPTSVSRQRVESLRK R L G S R Q 0 1 0 0 0 0 0 2 0 0 1 0 0 0 1 4 1 0 1 1 0 0 12 0 1209.599 V9GYZ0;Q9BZ23 V9GYZ0 64 75 PANK2 Pantothenate kinase 2, mitochondrial yes no 2 3.9424E-08 118.76 By MS/MS By MS/MS By MS/MS 1 1 1 11464000 3428300 4411700 3624400 1599 1800 1699 5186;5187;5188 3720;3721;3722 3721 2501 3 LGTLNGSQEEMWQK EDSISNLKLGTLNGSQ SQEEMWQKTETVKQEN K L G Q K T 0 0 1 0 0 2 2 2 0 0 2 1 1 0 0 1 1 1 0 0 0 0 14 0 1619.7614 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6 H0YDJ4 1035 1048 NIN Ninein yes no 2 0.012754 46.797 By MS/MS By matching By matching 1 1 1 1553800 764870 372810 416130 1600 398 1700 5189;5190;5191 3723 3723 531 0 LGVSVSPSR RSKSPKKKLGVSVSPS GVSVSPSRARRRRKTS K L G S R A 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 3 0 0 0 2 0 0 9 0 900.50288 H3BP01;E7ERS3;Q86VM9 H3BP01 194 202 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 2 0.0032723 89.561 By MS/MS By MS/MS By MS/MS 1 1 1 56446000 19255000 21489000 15702000 1601 533 1701 5192;5193;5194 3724;3725;3726 3725 691;692 3 LHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALR EEIAFLKKLHEEEIQE PDLTAALRDVRQQYES K L H L R D 3 1 0 3 0 6 5 0 2 3 4 1 0 0 1 1 1 0 0 3 0 0 34 1 3922.0072 P08670;B0YJC4;B0YJC5;Q5JVS8 P08670 237 270 VIM Vimentin yes no 4;5 3.4342E-05 54.824 By MS/MS By matching By matching 2 2 2 33503000 14200000 6675400 12627000 1602 1129 1702 5195;5196;5197;5198;5199;5200 3727;3728;3729 3729 3 LHPDGSPDVAGEK RLNVKAQKLHPDGSPD SPDVAGEKGIQKIPSG K L H E K G 1 0 0 2 0 0 1 2 1 0 1 1 0 0 2 1 0 0 0 1 0 0 13 0 1320.631 Q7Z2Z1 Q7Z2Z1 594 606 TICRR Treslin yes yes 2 0.018817 48.532 By matching By matching By MS/MS 1 1 1 3203300 1277600 1192900 732800 1603 1577 1703 5201;5202;5203 3730 3730 2146 1 LHQLSGSDQLESTAHSR MEHLERTKLHQLSGSD LESTAHSRIRKERPIS K L H S R I 1 1 0 1 0 2 1 1 2 0 3 0 0 0 0 4 1 0 0 0 0 0 17 0 1864.9028 A0A087X2D8;O60271 A0A087X2D8 179 195 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 3 0.0008758 64.588 By MS/MS 1 1148100 1148100 0 0 1604 114 1704 5204 3731 3731 147 1 LHVGNISPTCTNK NKSKTSTKLHVGNISP ISPTCTNKELRAKFEE K L H N K E 0 0 2 0 1 0 0 1 1 1 1 1 0 0 1 1 2 0 0 1 0 0 13 0 1439.7191 Q9BWF3;D6R9K7;J3QRR5;E9PB51 Q9BWF3 80 92 RBM4 RNA-binding protein 4 yes no 2 0.006864 60.968 By matching By MS/MS By matching 1 1 1 8340800 2790900 2977200 2572700 1605 1788 1705 5205;5206;5207 3732 3732 2482 1 LIALLEVLSQK TDLSDGLRLIALLEVL LLEVLSQKKMHRKHNQ R L I Q K K 1 0 0 0 0 1 1 0 0 1 4 1 0 0 0 1 0 0 0 1 0 0 11 0 1225.7646 Q5HY54;Q60FE5;P21333;A0A087WWY3;F8WE98;O75369;Q14315 Q5HY54 77 87 FLNA;FLNB;FLNC Filamin-A;Filamin-B;Filamin-C no no 2 9.0393E-11 114.86 By MS/MS By MS/MS 1 1 999470 0 0 999470 1606 1182;1410 1706 5208;5209 3733;3734 3733 2 LIAPVAEEEATVPNNK ________________ EATVPNNKITVVGVGQ K L I N K I 3 0 2 0 0 0 3 0 0 1 1 1 0 0 2 0 1 0 0 2 0 0 16 0 1693.8887 P07195;A8MW50;F5H793;C9J7H8 P07195 8 23 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 2;3 6.8192E-12 110.66 By matching By MS/MS By MS/MS 2 2 2 11429000 3470900 6130500 1827800 1607 1115 1707 5210;5211;5212;5213;5214;5215 3735;3736;3737 3735 2 LIDLESPTPESQK TIEEDLKKLIDLESPT SPTPESQKSFKFHALS K L I Q K S 0 0 0 1 0 1 2 0 0 1 2 1 0 0 2 2 1 0 0 0 0 0 13 0 1455.7457 O43166;F5GYF8 O43166 1544 1556 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 7.3083E-08 108.66 By MS/MS By MS/MS By MS/MS 1 1 1 5859500 1833000 2173900 1852500 1608 1001 1708 5216;5217;5218 3738;3739;3740 3740 1332 3 LIEDNEYTAR IADFGLARLIEDNEYT EDNEYTAREGAKFPIK R L I A R E 1 1 1 1 0 0 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 10 0 1222.583 Q573B4;J3QRU1;P06239;P12931;P06241;P07947 Q573B4 395 404 LCK;YES1;SRC;FYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lck;Proto-oncogene tyrosine-protein kinase Src;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Yes yes no 2 1.6037E-70 175.51 By MS/MS By MS/MS By MS/MS 1 1 1 78095000 33526000 25726000 18843000 1609 925 1709 5219;5220;5221 3741;3742;3743 3741 3728 3 LIEKASVNR HEDDKNGRLIEKASVN IEKASVNRKPQLPQHF R L I N R K 1 1 1 0 0 0 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 0 9 1 1028.5978 E9PJT9;Q6VVX0 E9PJT9 27 35 CYP2R1 Vitamin D 25-hydroxylase yes no 2 0.017438 54.549 By MS/MS 1 0 0 0 0 1610 594 1710 5222 3744 3744 789 1 LIGTAVPQRTSPTGPK QIFNKSKKLIGTAVPQ RTSPTGPKNMQTSGRL K L I P K N 1 1 0 0 0 1 0 2 0 1 1 1 0 0 3 1 3 0 0 1 0 0 16 1 1621.9152 C9JB30;Q9UPY8 C9JB30 152 167 MAPRE3 Microtubule-associated protein RP/EB family member 3 yes no 3 0.011004 46.663 By matching By MS/MS By matching 1 1 1 1841600 502440 792410 546770 1611 428 1711 5223;5224;5225 3745 3745 568;3022 1 LINDVTSIR RNLLLQTRLINDVTSI INDVTSIRPNIFLGVA R L I I R P 0 1 1 1 0 0 0 0 0 2 1 0 0 0 0 1 1 0 0 1 0 0 9 0 1029.5819 A0A0U1RRH1;A0A0X1KG73;A0A087X080;Q15413 A0A0U1RRH1 635 643 RYR3 Ryanodine receptor 3 yes no 2 0.0033615 93.561 By MS/MS 1 348020 0 0 348020 1612 95 1712 5226 3746 3746 115 1 LIPGPLSPVAR SKEPLKEKLIPGPLSP GPLSPVARGGSNGGSN K L I A R G 1 1 0 0 0 0 0 1 0 1 2 0 0 0 3 1 0 0 0 1 0 0 11 0 1118.6812 P48634 P48634 1213 1223 PRRC2A Protein PRRC2A yes yes 2 0.0090164 59.57 By MS/MS By matching By MS/MS 1 1 1 50211000 18206000 15115000 16891000 1613 1251 1713 5227;5228;5229 3747;3748 3748 1643 2 LIQETQMSR L I S R 0 1 0 0 0 2 1 0 0 1 1 0 1 0 0 1 1 0 0 0 0 0 9 0 1104.5597 REV__Q69YU3 yes yes 2 0.0033245 91.9 By matching By MS/MS 1 2 4718300 1438600 3279600 0 + 1614 2006 1714 5230;5231;5232 3749 3749 2859 1 LIRGPGENGDDS GGKRGHKRLIRGPGEN PGENGDDS________ R L I D S - 0 1 1 2 0 0 1 3 0 1 1 0 0 0 1 1 0 0 0 0 0 0 12 1 1228.5684 Q6IBS0 Q6IBS0 338 349 TWF2 Twinfilin-2 yes yes 2 0.0099553 65.842 By MS/MS By MS/MS 1 1 927810 0 0 927810 1615 1535 1715 5233;5234 3750;3751 3751 2088 1 LISQIVSSITASLR PTYTNLNRLISQIVSS SSITASLRFDGALNVD R L I L R F 1 1 0 0 0 1 0 0 0 3 2 0 0 0 0 4 1 0 0 1 0 0 14 0 1486.8719 P68363;F5H5D3;Q9BQE3;F8VVB9;C9J2C0;P68366;Q9NY65;C9JDS9;Q9H853 P68363 230 243 TUBA1B;TUBA1C;TUBA8;TUBA4A;TUBA4B Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-8 chain;Putative tubulin-like protein alpha-4B yes no 2 6.1968E-05 93.959 By MS/MS 1 1396400 0 1396400 0 1616 1318 1716 5235 3752 3752 1 LISWYDNEFGYSNR ALNDHFVKLISWYDNE NEFGYSNRVVDLMAHM K L I N R V 0 1 2 1 0 0 1 1 0 1 1 0 0 1 0 2 0 1 2 0 0 0 14 0 1762.7951 P04406;E7EUT5 P04406 310 323 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.011589 56.404 By MS/MS By MS/MS By matching 1 1 1 4416700 2018400 1111900 1286400 1617 1103 1717 5236;5237;5238 3753;3754 3754 2 LITQRISAAMYKSLDQAISR GRSIDLNRLITQRISA SLDQAISRFESEDLTS R L I S R F 3 2 0 1 0 2 0 0 0 3 2 1 1 0 0 3 1 0 1 0 0 0 20 2 2264.2311 E7EW33;H7C229;E7EVJ5;Q96F07 E7EW33 570 589 CYFIP2 Cytoplasmic FMR1-interacting protein 2 yes no 2 0.012937 52.071 By MS/MS 1 0 0 0 0 1618 552 1718 5239 3755 3755 733 1 LKATVTPSPVK EKKMPKPRLKATVTPS TVTPSPVKGKGKVGRP R L K V K G 1 0 0 0 0 0 0 0 0 0 1 2 0 0 2 1 2 0 0 2 0 0 11 1 1139.6914 Q9H1E3 Q9H1E3 174 184 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2 9.5952E-43 162.67 By MS/MS By MS/MS By MS/MS 2 2 2 125780000 51808000 39134000 34834000 1619 1813 1719;1720 5240;5241;5242;5243;5244;5245 3756;3757;3758;3759;3760;3761;3762 3757 2532;3496;3497 7 LKATVTPSPVKGK EKKMPKPRLKATVTPS TPSPVKGKGKVGRPTA R L K G K G 1 0 0 0 0 0 0 1 0 0 1 3 0 0 2 1 2 0 0 2 0 0 13 2 1324.8078 Q9H1E3 Q9H1E3 174 186 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 0.00096577 77.726 By MS/MS By MS/MS By MS/MS 4 3 4 68122000 21304000 15156000 31662000 1620 1813 1721;1722 5246;5247;5248;5249;5250;5251;5252;5253;5254;5255;5256 3763;3764;3765;3766;3767;3768;3769 3767 2532;3496;3497 7 LKDLFDYSPPLHK PEQVKSEKLKDLFDYS DYSPPLHKNLDAREKS K L K H K N 0 0 0 2 0 0 0 0 1 0 3 2 0 1 2 1 0 0 1 0 0 0 13 1 1571.8348 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 505 517 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3 5.4689E-05 98.573 By MS/MS By MS/MS By MS/MS 2 2 3 18350000 7003200 2902100 8444900 1621 596 1723 5257;5258;5259;5260;5261;5262;5263 3770;3771;3772;3773;3774;3775 3771 793 6 LKEDLNEKTTENNEQR ALKIEVNKLKEDLNEK TTENNEQREEIIRLKQ K L K Q R E 0 1 3 1 0 1 4 0 0 0 2 2 0 0 0 0 2 0 0 0 0 0 16 2 1959.9498 A0A024RBT8;Q6P9F0 A0A024RBT8 37 52 CCDC62 Coiled-coil domain-containing protein 62 yes no 3 0.0039689 47.204 By MS/MS 1 2544500 0 0 2544500 1622 3 1724 5264 3776 3776 1;2 2866;2867 1 LKFSDDEEEEEVVK EEVDYSEKLKFSDDEE EEEEEVVKDGRPKWNS K L K V K D 0 0 0 2 0 0 5 0 0 0 1 2 0 1 0 1 0 0 0 2 0 0 14 1 1694.7887 Q5JSZ5 Q5JSZ5 385 398 PRRC2B Protein PRRC2B yes yes 2 0.0074595 63.31 By MS/MS 1 3862800 3862800 0 0 1623 1488 1725 5265 3777 3777 2001 1 LKLSPSPSSR LLEGEEERLKLSPSPS LSPSPSSRVTVSRASS R L K S R V 0 1 0 0 0 0 0 0 0 0 2 1 0 0 2 4 0 0 0 0 0 0 10 1 1070.6084 P20700;Q03252 P20700 388 397 LMNB1;LMNB2 Lamin-B1;Lamin-B2 no no 2 0.007526 83.53 By MS/MS By MS/MS By matching 2 2 1 49414000 18817000 20436000 10161000 1624 1180;1340 1726;1727 5266;5267;5268;5269;5270 3778;3779;3780 3780 1529;1530 3 LKPGGVGAPSSSSPSPSPSAR RQLEEEQKLKPGGVGA PSPSPSARPGPPPSEE K L K A R P 2 1 0 0 0 0 0 3 0 0 1 1 0 0 5 7 0 0 0 1 0 0 21 1 1921.9858 Q92797 Q92797 1159 1179 SYMPK Symplekin yes yes 3 0.0072556 47.806 By MS/MS By matching By matching 1 1 1 4611600 1452500 1479800 1679300 1625 1710 1728 5271;5272;5273 3781 3781 2349 1 LKQTYLSVLWQMRY ILIWGNKKLKQTYLSV SVLWQMRY________ K L K R Y - 0 1 0 0 0 2 0 0 0 0 3 1 1 0 0 1 1 1 2 1 0 0 14 2 1827.9706 A0A0J9YXD8;P59539 A0A0J9YXD8 286 299 TAS2R45 Taste receptor type 2 member 45 yes no 2 0.014237 48.112 By MS/MS 1 0 0 0 0 1626 242 1729 5274 3782 3782 2950;3605 1 LKSEDELRPEVDEHTQK PPKPVRRRLKSEDELR EVDEHTQKTGVLAAVL R L K Q K T 0 1 0 2 0 1 4 0 1 0 2 2 0 0 1 1 1 0 0 1 0 0 17 2 2052.0124 E9PMG1;H0YDT0;Q96D71;H0YCR2 E9PMG1 648 664 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 3 0.0079219 58.626 By MS/MS By matching By matching 1 1 1 13513000 7124400 3894100 2494500 1627 609 1730 5275;5276;5277 3783 3783 819 1 LKSEDGVEGDLGETQSR YTTKIKPRLKSEDGVE DLGETQSRTITVTRRV R L K S R T 0 1 0 2 0 1 3 3 0 0 2 1 0 0 0 2 1 0 0 1 0 0 17 1 1818.8595 Q09666 Q09666 133 149 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 3 0.01631 43.532 By matching By MS/MS By matching 1 1 1 9751200 3172300 3516200 3062700 1628 1359 1731 5278;5279;5280 3784 3784 1789 1 LLAQAEGEPCYIR RVPVCHLRLLAQAEGE EGEPCYIRDSGVAPTD R L L I R D 2 1 0 0 1 1 2 1 0 1 2 0 0 0 1 0 0 0 1 0 0 0 13 0 1518.7501 H0YE41;E9PPF2;E9PM19;P29597 H0YE41 61 73 TYK2 Tyrosine-protein kinase;Non-receptor tyrosine-protein kinase TYK2 yes no 2 3.7015E-05 88.495 By MS/MS By matching By matching 1 1 1 4695600 1850500 1542100 1303000 1629 606 1732 5281;5282;5283 3785 3785 3678 1 LLASSPALPSSGAQAR GPPVGEPRLLASSPAL PSSGAQARLTRAPGPP R L L A R L 4 1 0 0 0 1 0 1 0 0 3 0 0 0 2 4 0 0 0 0 0 0 16 0 1524.826 Q9NYZ3 Q9NYZ3 164 179 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.015436 45.257 By MS/MS By matching By matching 1 1 1 3662000 1275100 1193800 1193100 1630 1881 1733 5284;5285;5286 3786 3786 2654 1 LLCGLLAER AQNRSYSKLLCGLLAE LCGLLAERLRISPDRV K L L E R L 1 1 0 0 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 9 0 1043.5798 P14174 P14174 79 87 MIF Macrophage migration inhibitory factor yes yes 2 0.015559 69.825 By MS/MS By matching By matching 1 1 1 2478600 556070 1775200 147320 1631 1158 1734 5287;5288;5289 3787 3787 1 LLCQDSESQIQQYQFWQFHK AQVEKVPKLLCQDSES YQFWQFHKGNLQAGQP K L L H K G 0 0 0 1 1 6 1 0 1 1 2 1 0 2 0 2 0 1 1 0 0 0 20 0 2612.2118 F6X344;A0A0A0MS57;Q96JA4 F6X344 527 546 MS4A14 Membrane-spanning 4-domains subfamily A member 14 yes no 3 0.017159 43.611 By MS/MS 1 0 0 0 0 1632 145 1735 5290 3788 3788 194;195 1 LLDSSDSPFSASQYSTELK TSAHCNLRLLDSSDSP SQYSTELKKLYCQI__ R L L L K K 1 0 0 2 0 1 1 0 0 0 3 1 0 1 1 6 1 0 1 0 0 0 19 0 2073.9742 C9JW72 C9JW72 159 177 TP63 yes yes 2 0.014854 45.28 By MS/MS 1 0 0 0 0 1633 450 1736 5291 3789 3789 592;593;594;3027;3651 1 LLEDSEESSEETVSR LEKNRSYRLLEDSEES SSEETVSRAGSSLQKK R L L S R A 0 1 0 1 0 0 5 0 0 0 2 0 0 0 0 4 1 0 0 1 0 0 15 0 1708.7639 A2AB15;A0A140T947;O60231 A2AB15 39 53 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 2 1.7072E-11 106.6 By MS/MS By MS/MS By MS/MS 2 2 2 26694000 8801400 10360000 7533200 1634 265 1737;1738 5292;5293;5294;5295;5296;5297 3790;3791;3792;3793 3790 347;348 4 LLENPTINHQKNRPTR LVTGCCYRLLENPTIN HQKNRPTREAITHLLG R L L T R E 0 2 3 0 0 1 1 0 1 1 2 1 0 0 2 0 2 0 0 0 0 0 16 2 1930.0497 Q15021;E7EN77 Q15021 205 220 NCAPD2 Condensin complex subunit 1 yes no 2 0.0068674 42.425 By MS/MS 1 611810 0 0 611810 1635 1428 1739 5298 3794 3794 88;89 1 LLEQEALMEQQDPKSPSHK QEQALMEKLLEQEALM DPKSPSHKSKRQQQEL K L L H K S 1 0 0 1 0 3 3 0 1 0 3 2 1 0 2 2 0 0 0 0 0 0 19 1 2207.0892 C9IZY8;Q96PY5 C9IZY8 377 395 FMNL2 Formin-like protein 2 yes no 3 0.014291 44.391 By matching By MS/MS By matching 1 1 1 3088100 1075700 1179500 832940 1636 397 1740 5299;5300;5301 3795 3795 530 1 LLETIDQLYLEYAK EALERTEKLLETIDQL QLYLEYAKRAAPFNNW K L L A K R 1 0 0 1 0 1 2 0 0 1 4 1 0 0 0 0 1 0 2 0 0 0 14 0 1710.908 P12814;H9KV75;H0YJ11;H7C5W8 P12814 503 516 ACTN1 Alpha-actinin-1 yes no 2 4.7407E-05 92.611 By matching By MS/MS 1 1 2198100 0 904930 1293200 1637 1152 1741 5302;5303 3796 3796 1 LLETQSTGACQSSCK GPYSSMHKLLETQSTG GACQSSCKISSPCLKA K L L C K I 1 0 0 0 2 2 1 1 0 0 2 1 0 0 0 3 2 0 0 0 0 0 15 0 1668.7447 A0A0B4J1X2;O43497 A0A0B4J1X2 635 649 CACNA1G Voltage-dependent T-type calcium channel subunit alpha-1G yes no 3 0.010099 44.968 By MS/MS 1 933170 0 0 933170 1638 175 1742 5304 3797 3797 239;240 0 LLHQFSFSPEREIRNVELLK YRSLLADRLLHQFSFS IRNVELLKLRFGEAPM R L L L K L 0 2 1 0 0 1 3 0 1 1 4 1 0 2 1 2 0 0 0 1 0 0 20 2 2454.3383 Q9UJX6 Q9UJX6 527 546 ANAPC2 Anaphase-promoting complex subunit 2 yes yes 3 0.00013784 63.918 By MS/MS 1 0 0 0 0 1639 1911 1743 5305 3798 3798 111;142 2693;2694 1 LLIDPNCSGHSPR KGSFSKGRLLIDPNCS NCSGHSPRTARHAPAV R L L P R T 0 1 1 1 1 0 0 1 1 1 2 0 0 0 2 2 0 0 0 0 0 0 13 0 1464.7143 Q8WYQ5;C9JSD5 Q8WYQ5 85 97 DGCR8 Microprocessor complex subunit DGCR8 yes no 2;3 5.7528E-05 88.075 By MS/MS By MS/MS By MS/MS 2 2 2 3886500 1372900 1607200 906320 1640 1692 1744 5306;5307;5308;5309;5310;5311 3799;3800;3801;3802;3803;3804 3799 2318;2319 6 LLIHQSLAGGIIGVK SDFDCELRLLIHQSLA AGGIIGVKGAKIKELR R L L V K G 1 0 0 0 0 1 0 3 1 3 3 1 0 0 0 1 0 0 0 1 0 0 15 0 1517.9293 P61978;Q5T6W2 P61978 149 163 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 0.00092603 64.244 By MS/MS By matching 1 1 859440 491980 367460 0 1641 1306 1745 5312;5313 3805 3805 1 LLISELHLRVHAAYGSTK RHKANFLKLLISELHL HAAYGSTKDVAVYSAI K L L T K D 2 1 0 0 0 0 1 1 2 1 4 1 0 0 0 2 1 0 1 1 0 0 18 1 2007.1265 Q9BZ72 Q9BZ72 1195 1212 PITPNM2 Membrane-associated phosphatidylinositol transfer protein 2 yes yes 3 0.0158 44.294 By MS/MS 1 0 0 0 0 1642 1801 1746 5314 3806 3806 2504;2505;3495 1 LLIVQDASER QEAEEENRLLIVQDAS IVQDASERAALIPGGL R L L E R A 1 1 0 1 0 1 1 0 0 1 2 0 0 0 0 1 0 0 0 1 0 0 10 0 1142.6295 C9JPX5;C9JKL2;O95772 C9JPX5 186 195 STARD3NL MLN64 N-terminal domain homolog yes no 2 0.0088124 63.473 By matching By MS/MS 1 1 783330 433700 349640 0 1643 438 1747 5315;5316 3807 3807 576 1 LLIYAVLPTGDVIGDSAK SDIAPVARLLIYAVLP DVIGDSAKYDVENCLA R L L A K Y 2 0 0 2 0 0 0 2 0 2 3 1 0 0 1 1 1 0 1 2 0 0 18 0 1844.0295 P01023 P01023 540 557 A2M Alpha-2-macroglobulin yes yes 2 6.7746E-26 118.37 By MS/MS By MS/MS By MS/MS 1 1 1 17045000 7019500 4833700 5191800 1644 1086 1748 5317;5318;5319 3808;3809;3810 3808 3 LLKEGEEPTVYSDEEEPKDESAR FKYHHVGKLLKEGEEP EPKDESARKND_____ K L L A R K 1 1 0 2 0 0 7 1 0 0 2 2 0 0 2 2 1 0 1 1 0 0 23 2 2649.2294 O00264 O00264 170 192 PGRMC1 Membrane-associated progesterone receptor component 1 yes yes 3;4 7.8805E-18 90.896 By MS/MS By MS/MS By MS/MS 2 2 2 115370000 56001000 33939000 25426000 1645 972 1749 5320;5321;5322;5323;5324;5325 3811;3812;3813;3814;3815 3814 1283;3232;3735 5 LLKEKEDSLMTCQQIYK ________________ MTCQQIYKALQEELTV M L L Y K A 0 0 0 1 1 2 2 0 0 1 3 3 1 0 0 1 1 0 1 0 0 0 17 2 2126.0752 Q6ZMV7 Q6ZMV7 2 18 LEKR1 Leucine-, glutamate- and lysine-rich protein 1 yes yes 3 0.016267 42.568 By MS/MS 1 0 0 0 0 1646 1564 1750 5326 3816 3816 3435 1 LLLAEDSEEEVDFLSER QGETQPQRLLLAEDSE EVDFLSERRMVKKSRT R L L E R R 1 1 0 2 0 0 5 0 0 0 4 0 0 1 0 2 0 0 0 1 0 0 17 0 1992.9528 Q14676 Q14676 162 178 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 2 1.1267E-16 106.19 By MS/MS By MS/MS By MS/MS 1 1 1 12179000 5335300 2615400 4228400 1647 1414 1751 5327;5328;5329 3817;3818;3819 3817 1883 3 LLLATMESMNGGK ADLIERDRLLLATMES MESMNGGKLYSNAYLN R L L G K L 1 0 1 0 0 0 1 2 0 0 3 1 2 0 0 1 1 0 0 0 0 0 13 0 1363.684 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 101 113 ALDH1A1 Retinal dehydrogenase 1 yes no 2 0.0062962 42.469 By matching By matching By MS/MS 1 1 1 1264500 585960 414220 264350 1648 1078 1752 5330;5331;5332 3820 3820 78;79 3271 1 LLLDSGINAHVR CGKTEVVRLLLDSGIN SGINAHVRNTYSQTAL R L L V R N 1 1 1 1 0 0 0 1 1 1 3 0 0 0 0 1 0 0 0 1 0 0 12 0 1306.7357 Q8WXD9 Q8WXD9 239 250 CASKIN1 Caskin-1 yes yes 1 0.017982 33.922 By MS/MS 1 2503600 0 2503600 0 1649 1687 1753 5333 3821 3821 0 LLLERPSPIR SDNDRSSRLLLERPSP LERPSPIRDRRGSLEK R L L I R D 0 2 0 0 0 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 10 1 1192.7292 A0A087WWP4;Q96T37 A0A087WWP4 650 659 RBM15 Putative RNA-binding protein 15 yes no 2 0.007635 72.006 By matching By matching By MS/MS 1 1 1 11353000 4183900 3965800 3203400 1650 65 1754 5334;5335;5336 3822 3822 82 1 LLLNSGRVDVDCRDSVR RGNLALLKLLLNSGRV VDCRDSVRWFGRCMPS K L L V R W 0 3 1 3 1 0 0 1 0 0 3 0 0 0 0 2 0 0 0 3 0 0 17 2 1973.0113 V9GYT2 V9GYT2 30 46 ANKRD29 yes yes 3 0.010555 54.598 By MS/MS 1 0 0 0 0 1651 2012 1755 5337 3823 3823 2863;2864 1 LLNLQDSDSEECTSR RLQCFQPRLLNLQDSD DSEECTSRKPGQTVNN R L L S R K 0 1 1 2 1 1 2 0 0 0 3 0 0 0 0 3 1 0 0 0 0 0 15 0 1765.7789 Q52LR7 Q52LR7 532 546 EPC2 Enhancer of polycomb homolog 2 yes yes 2 0.0028899 62.861 By MS/MS 1 1325800 1325800 0 0 1652 1475 1756 5338 3824 3824 1977 1 LLNVEVPQKVGSEQK ICHSYLERLLNVEVPQ QKVGSEQKEPPEEAEP R L L Q K E 0 0 1 0 0 2 2 1 0 0 2 2 0 0 1 1 0 0 0 3 0 0 15 1 1666.9254 Q9NQS7 Q9NQS7 362 376 INCENP Inner centromere protein yes yes 2 0.016215 46.964 By matching By matching By MS/MS 1 1 1 10001000 4113900 3589100 2298400 1653 1846 1757 5339;5340;5341 3825 3825 2592 1 LLPEGEETLESDDEKDEHTSK PQNAKKARLLPEGEET EKDEHTSKKRKVEPGE R L L S K K 0 0 0 3 0 0 6 1 1 0 3 2 0 0 1 2 2 0 0 0 0 0 21 1 2400.0816 Q8N6N3 Q8N6N3 148 168 C1orf52 UPF0690 protein C1orf52 yes yes 3 0.0098774 58.997 By matching By MS/MS By matching 1 1 1 53786000 25523000 16973000 11290000 1654 1638 1758 5342;5343;5344 3826 3826 2244;3459 1 LLPYPTLASPASD WVSRGPDKLLPYPTLA TLASPASD________ K L L S D - 2 0 0 1 0 0 0 0 0 0 3 0 0 0 3 2 1 0 1 0 0 0 13 0 1343.6973 P0C1Z6 P0C1Z6 241 253 TFPT TCF3 fusion partner yes yes 2 0.013879 50.786 By MS/MS By matching 1 1 777970 0 467120 310850 1655 1132 1759 5345;5346 3827 3827 1479 1 LLQAQGVEVPSKDSLPK ARAEATLKLLQAQGVE PSKDSLPKKRPIYEDK K L L P K K 1 0 0 1 0 2 1 1 0 0 3 2 0 0 2 2 0 0 0 2 0 0 17 1 1808.0044 A0A087WUT6;O60841 A0A087WUT6 425 441 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.0050735 58.172 By matching By matching By MS/MS 1 1 1 1347600 583120 377050 387430 1656 41 1760 5347;5348;5349 3828 3828 50 1 LLQDNQRQKK NISSRIQKLLQDNQRQ QDNQRQKKSSEILKSL K L L K K S 0 1 1 1 0 3 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 10 2 1269.7153 Q6UWE0 Q6UWE0 342 351 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes yes 2 0.0026245 71.223 By matching By MS/MS 1 1 1180700 661890 0 518850 1657 1560 1761 5350;5351 3829 3829 96;137;138 1 LLQDSSSPVDLAK EKHKILHRLLQDSSSP SSPVDLAKLTAEATGK R L L A K L 1 0 0 2 0 1 0 0 0 0 3 1 0 0 1 3 0 0 0 1 0 0 13 0 1371.7246 E7EWM1;Q15596 E7EWM1 693 705 NCOA2 Nuclear receptor coactivator 2 yes no 2 6.2767E-05 91.307 By MS/MS By MS/MS By matching 1 1 1 3406900 1166000 1296600 944310 1658 555 1762 5352;5353;5354 3830;3831 3830 739;740 2 LLQDSVDFSLADAINTEFK RSSVPGVRLLQDSVDF DAINTEFKNTRTNEKV R L L F K N 2 0 1 3 0 1 1 0 0 1 3 1 0 2 0 2 1 0 0 1 0 0 19 0 2125.0579 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 79 97 VIM Vimentin yes no 3 2.0484E-54 124.2 By MS/MS 1 0 0 0 0 1659 1129 1763 5355 3832 3832 1 LLQDSVDFSLADAINTEFKNTR RSSVPGVRLLQDSVDF NTEFKNTRTNEKVELQ R L L T R T 2 1 2 3 0 1 1 0 0 1 3 1 0 2 0 2 2 0 0 1 0 0 22 1 2496.2496 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 79 100 VIM Vimentin yes no 3 9.4116E-41 114.88 By MS/MS By MS/MS By MS/MS 1 1 1 13048000 7406300 2748700 2893400 1660 1129 1764 5356;5357;5358 3833;3834;3835 3833 3 LLRDHNLTREQFIALYR ITPEQFSRLLRDHNLT EQFIALYRLRPLVYTP R L L Y R L 1 3 1 1 0 1 1 0 1 1 4 0 0 1 0 0 1 0 1 0 0 0 17 2 2157.1807 F2Z3L3;J3KNR3;Q96P65 F2Z3L3 14 30 QRFPR Pyroglutamylated RFamide peptide receptor yes no 3 0.0061288 45.873 By MS/MS By matching By matching 1 1 1 3147100 1743100 653720 750300 1661 630 1765 5359;5360;5361 3836 3836 3684 1 LLRLSQMKPTYLTR RYFEELFKLLRLSQMK MKPTYLTRHVKPERLV K L L T R H 0 2 0 0 0 1 0 0 0 0 4 1 1 0 1 1 2 0 1 0 0 0 14 2 1718.9865 Q9NVR0 Q9NVR0 291 304 KLHL11 Kelch-like protein 11 yes yes 3 0.011766 49.929 By MS/MS 1 0 0 0 0 1662 1865 1766 5362 3837 3837 3517;3518 1 LLSASQLSAEEEEEKQAE MKWKKESKLLSASQLS EEEEKQAE________ K L L A E - 3 0 0 0 0 2 6 0 0 0 3 1 0 0 0 3 0 0 0 0 0 0 18 1 1989.9379 P17509 P17509 207 224 HOXB6 Homeobox protein Hox-B6 yes yes 2 1.5088E-10 94.122 By matching By MS/MS By matching 1 1 1 9410200 2794400 3597100 3018700 1663 1166 1767 5363;5364;5365 3838 3838 1511 1 LLSPACPAPK RVGCADSRLLSPACPA SPACPAPKEVTAAPAV R L L P K E 2 0 0 0 1 0 0 0 0 0 2 1 0 0 3 1 0 0 0 0 0 0 10 0 1052.5689 A0A0A0MSJ8;T1ECW5;O75170 A0A0A0MSJ8 471 480 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 2 0.00099805 93.442 By MS/MS By matching By MS/MS 1 1 1 1497300 393630 476390 627260 1664 151 1768 5366;5367;5368 3839;3840 3840 200 2 LLSPQQPALQR TSSLTDPRLLSPQQPA PQQPALQRNSVSPGLP R L L Q R N 1 1 0 0 0 3 0 0 0 0 3 0 0 0 2 1 0 0 0 0 0 0 11 0 1249.7143 Q14814 Q14814 178 188 MEF2D Myocyte-specific enhancer factor 2D yes yes 2 0.0065738 65.842 By MS/MS By matching By matching 1 1 1 1468400 552390 500090 415960 1665 1422 1769 5369;5370;5371 3841 3841 1901 1 LLSSSLTADCSLR EEEDEQVRLLSSSLTA LTADCSLRSPSGREVE R L L L R S 1 1 0 1 1 0 0 0 0 0 4 0 0 0 0 4 1 0 0 0 0 0 13 0 1421.7184 Q147X3 Q147X3 186 198 NAA30 N-alpha-acetyltransferase 30 yes yes 2 0.0078649 58.781 By MS/MS By matching By MS/MS 1 1 1 1234300 358630 314880 560840 1666 1421 1770 5372;5373;5374 3842;3843 3842 1899;1900 2 LLSTDAEAVSTR DVEKEVKRLLSTDAEA DAEAVSTRWEIIAEDE R L L T R W 2 1 0 1 0 0 1 0 0 0 2 0 0 0 0 2 2 0 0 1 0 0 12 0 1261.6514 Q15545 Q15545 169 180 TAF7 Transcription initiation factor TFIID subunit 7 yes yes 2 0.0066752 64.224 By MS/MS By MS/MS 1 1 1584700 0 809170 775500 1667 1443 1771 5375;5376 3844;3845 3844 1932 2 LLVQNLNNERTLLTR KSQKASERLLVQNLNN NERTLLTRGLLKIDRL R L L T R G 0 2 3 0 0 1 1 0 0 0 5 0 0 0 0 0 2 0 0 1 0 0 15 1 1796.0268 A6PVS8 A6PVS8 516 530 LRRIQ3 Leucine-rich repeat and IQ domain-containing protein 3 yes yes 4 0.013597 60.093 By MS/MS 1 155280 155280 0 0 1668 312 1772 5377 3846 3846 2975 0 LLVTDMSDAEQYR RRVYEILRLLVTDMSD MSDAEQYRSYRLDIKR R L L Y R S 1 1 0 2 0 1 1 0 0 0 2 0 1 0 0 1 1 0 1 1 0 0 13 0 1539.7239 O14929 O14929 337 349 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 0.012697 60.102 By MS/MS 1 232860 0 232860 0 1669 985 1773 5378 3847 3847 1 LLVVYPWTQR VGGEALGRLLVVYPWT VVYPWTQRFFESFGDL R L L Q R F 0 1 0 0 0 1 0 0 0 0 2 0 0 0 1 0 1 1 1 2 0 0 10 0 1273.7183 F8W6P5;E9PEW8;E9PFT6;P68871;P02042;A8MUF7;E9PBW4;CON__P02070;CON__Q3SX09;P69892;P69891;P02100 F8W6P5 32 41 HBB;HBD;HBE1;HBG2;HBG1 Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta;Hemoglobin subunit gamma-2;Hemoglobin subunit gamma-1;Hemoglobin subunit epsilon yes no 2 0.0070899 73.665 By MS/MS By matching By matching 1 1 1 2703700 1899400 52307 752030 + 1670 571 1774 5379;5380;5381 3848 3848 1 LMFKTEGPDSD QSTSRHKKLMFKTEGP KTEGPDSD________ K L M S D - 0 0 0 2 0 0 1 1 0 0 1 1 1 1 1 1 1 0 0 0 0 0 11 1 1238.5489 A0A087X1Q1;A0A087WZU8;P04637 A0A087X1Q1 224 234 TP53 Cellular tumor antigen p53 yes no 2 0.00038537 106.67 By MS/MS By MS/MS By MS/MS 3 2 3 75204000 28893000 18866000 27444000 1671 89 1775;1776 5382;5383;5384;5385;5386;5387;5388;5389 3849;3850;3851;3852;3853;3854;3855 3849 7 110 7 LMIEMDGTENK TEQEKIDKLMIEMDGT EMDGTENKSKFGANAI K L M N K S 0 0 1 1 0 0 2 1 0 1 1 1 2 0 0 0 1 0 0 0 0 0 11 0 1279.5788 P06733;K7EM90 P06733 93 103 ENO1 Alpha-enolase;Enolase yes no 2 0.011986 64.711 By MS/MS By matching 1 1 683360 0 457360 226000 1672 1113 1777 5390;5391 3856 3856 1 LMLAVRKLAELQK TKLGHQKKLMLAVRKL RKLAELQKAEYAKYEG K L M Q K A 2 1 0 0 0 1 1 0 0 0 4 2 1 0 0 0 0 0 0 1 0 0 13 2 1511.9222 Q8WXD9 Q8WXD9 595 607 CASKIN1 Caskin-1 yes yes 1 0.017756 31.422 By MS/MS 1 2244300 0 0 2244300 1673 1687 1778 5392 3857 3857 1 LMLLLEVISGER EDFRDGLKLMLLLEVI LEVISGERLAKPERGK K L M E R L 0 1 0 0 0 0 2 1 0 1 4 0 1 0 0 1 0 0 0 1 0 0 12 0 1371.7796 P12814;P35609;O43707;G3V5M4;G3V2N5;A0A087WSZ2;Q08043 P12814 65 76 ACTN1;ACTN2;ACTN4;ACTN3 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4;Alpha-actinin-3 yes no 2 1.9828E-112 185.61 By MS/MS By MS/MS By matching 1 2 1 25155000 9680700 7800700 7673800 1674 1152 1779;1780 5393;5394;5395;5396 3858;3859;3860 3858 106 3 LMLSTSEYSQSPK SLTGDSCKLMLSTSEY SEYSQSPKMESLSSHR K L M P K M 0 0 0 0 0 1 1 0 0 0 2 1 1 0 1 4 1 0 1 0 0 0 13 0 1469.7072 Q12888;A6NNK5;C9JXV0 Q12888 515 527 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.014803 70.889 By MS/MS By matching By matching 1 1 1 3061500 746510 1221400 1093600 1675 1367 1781 5397;5398;5399 3861 3861 3359 1 LMSNLEEKQR KNNLLFQKLMSNLEEK SNLEEKQRSLQIMRQI K L M Q R S 0 1 1 0 0 1 2 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 10 1 1246.634 A0A1B0GVV6;A0A1B0GW51;A0A1B0GV15;A0A1B0GWI1;A0A1B0GTZ2 A0A1B0GVV6 38 47 yes no 2 0.01824 42.21 By matching By MS/MS 1 1 1376600 579080 797540 0 1676 274 1782 5400;5401 3862 3862 364 0 LMTGDTYTAHAGAK VADFGLSRLMTGDTYT YTAHAGAKFPIKWTAP R L M A K F 3 0 0 1 0 0 0 2 1 0 1 1 1 0 0 0 3 0 1 0 0 0 14 0 1435.6766 P42684;P00519 P42684 433 446 ABL2;ABL1 Abelson tyrosine-protein kinase 2;Tyrosine-protein kinase ABL1 yes no 2 4.728E-06 103.08 By MS/MS By matching By MS/MS 1 1 1 4847500 2192400 1710600 944510 1677 1238 1783 5402;5403;5404 3863;3864 3863 116 3317 2 LMTPKPVSIATNR SQYPPVQRLMTPKPVS PVSIATNRSVYFKPSL R L M N R S 1 1 1 0 0 0 0 0 0 1 1 1 1 0 2 1 2 0 0 1 0 0 13 1 1426.7966 P49790 P49790 367 379 NUP153 Nuclear pore complex protein Nup153 yes yes 3 0.0058678 56.139 By MS/MS By matching 1 1 515760 284720 231040 0 1678 1260 1784 5405;5406 3865 3865 119 3331 1 LNATASLEQER PQPQARSRLNATASLE TASLEQERSERPRAPG R L N E R S 2 1 1 0 0 1 2 0 0 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1230.6204 O76024 O76024 27 37 WFS1 Wolframin yes yes 2 0.0012787 87.498 By matching By MS/MS By MS/MS 1 1 1 4635500 1475200 1959900 1200500 1679 1046 1785 5407;5408;5409 3866;3867 3866 1403 2 LNCPGGPAQLQALAHR ATTYTHCRLNCPGGPA QLQALAHRCAAWDRGA R L N H R C 3 1 1 0 1 2 0 2 1 0 3 0 0 0 2 0 0 0 0 0 0 0 16 0 1701.8733 V9GY60;A0A087WTJ0;V9GZ64;A0A087X072;A0A087WZ30;O94761 V9GY60 10 25 RECQL4 ATP-dependent DNA helicase Q4 yes no 2 0.0068672 58.592 By MS/MS 1 0 0 0 0 1680 22 1786 5410 3868 3868 4 1 LNFDMTASPK IDKQEKVKLNFDMTAS FDMTASPKILMSKPVL K L N P K I 1 0 1 1 0 0 0 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 10 0 1122.5379 H7C4X9;A0A087WVZ6;Q9ULU4;A0A087WV57;A0A087WYS3 H7C4X9 326 335 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.0018664 87.216 By matching By matching By MS/MS 1 1 1 2770700 805600 844350 1120800 1681 54 1787 5411;5412;5413 3869 3869 71 1 LNHSPPQSSSR REKKFSRRLNHSPPQS SPPQSSSRYRENRSRD R L N S R Y 0 1 1 0 0 1 0 0 1 0 1 0 0 0 2 4 0 0 0 0 0 0 11 0 1208.5898 A0A087X0H9;Q5T8P6 A0A087X0H9 124 134 RBM26 RNA-binding protein 26 yes no 2 6.9805E-07 100.02 By MS/MS By MS/MS By MS/MS 1 2 1 9891800 3378600 4061700 2451500 1682 97 1788 5414;5415;5416;5417 3870;3871;3872;3873;3874;3875 3873 118 6 LNHVAAGLVSPSLK LMSTVDPKLNHVAAGL GLVSPSLKSDTSSKEI K L N L K S 2 0 1 0 0 0 0 1 1 0 3 1 0 0 1 2 0 0 0 2 0 0 14 0 1404.8089 Q5T757;Q05519;Q5T760 Q5T757 138 151 SRSF11 Serine/arginine-rich splicing factor 11 yes no 2;3 0.00064276 73.76 By MS/MS By MS/MS By MS/MS 2 2 2 54490000 21098000 17095000 16297000 1683 1344 1789 5418;5419;5420;5421;5422;5423 3876;3877;3878;3879 3879 1764 4 LNLGTDSDSSPQK TGDISVEKLNLGTDSD DSDSSPQKSSRDPPSS K L N Q K S 0 0 1 2 0 1 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 0 13 0 1360.647 K7EN76;Q16512 K7EN76 39 51 PKN1 Serine/threonine-protein kinase N1 yes no 2 2.4341E-05 89.44 By MS/MS By MS/MS By matching 1 1 1 4889500 1450100 1689800 1749600 1684 947 1790 5424;5425;5426 3880;3881 3880 1252;1253 2 LNNLTFLYLDHNALESVPLNLPESLR IKANAFKKLNNLTFLY LNLPESLRVIHLQFNN K L N L R V 1 1 4 1 0 0 2 0 1 0 8 0 0 1 2 2 1 0 1 1 0 0 26 0 2994.5815 P20774 P20774 212 237 OGN Mimecan yes yes 3 6.913E-15 86.791 By MS/MS By matching 1 1 8821200 0 4545700 4275500 1685 1181 1791 5427;5428 3882 3882 1 LNQKSDGKPR ________________ QKSDGKPRKVRFKISS K L N P R K 0 1 1 1 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 10 2 1141.6204 A6NFK2 A6NFK2 8 17 GRXCR2 Glutaredoxin domain-containing cysteine-rich protein 2 yes yes 2 0.0084858 67.153 By matching By MS/MS By matching 1 1 1 88170000 31835000 30217000 26118000 1686 305 1792 5429;5430;5431 3883 3883 19 406 1 LNQPGTPTR GWLCKTLRLNQPGTPT NQPGTPTRTAV_____ R L N T R T 0 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 2 0 0 0 0 0 9 0 982.51959 M0R1B6;G5E9C7;P36507 M0R1B6 93 101 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 2 0.0090992 98.754 By matching By MS/MS By MS/MS 1 1 1 45580000 16488000 14816000 14277000 1687 735 1793 5432;5433;5434 3884;3885;3886 3884 3155 3 LNQPGTPTRTAV GWLCKTLRLNQPGTPT GTPTRTAV________ R L N A V - 1 1 1 0 0 1 0 1 0 0 1 0 0 0 2 0 3 0 0 1 0 0 12 1 1253.6728 M0R1B6;G5E9C7;P36507 M0R1B6 93 104 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 yes no 2 0.0012434 89.26 By MS/MS By matching By MS/MS 1 1 1 16036000 4076400 4381800 7577400 1688 735 1794 5435;5436;5437 3887;3888 3888 3155 2 LNSELQQQLK ETNTVLARLNSELQQQ SELQQQLKDVLEERIS R L N L K D 0 0 1 0 0 3 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 10 0 1199.651 E9PMG1;H0YDT0;Q96D71;H0YE89;Q8NFH8 E9PMG1 706 715 REPS1;REPS2 RalBP1-associated Eps domain-containing protein 1;RalBP1-associated Eps domain-containing protein 2 yes no 2 0.0011342 92.866 By MS/MS By matching 1 1 1265200 0 703010 562190 1689 609 1795 5438;5439 3889 3889 820 1 LNTSDFQKLK FGDLPRPRLNTSDFQK TSDFQKLKRKY_____ R L N L K R 0 0 1 1 0 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 10 1 1192.6452 Q96B36 Q96B36 244 253 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.017785 69.815 By MS/MS By matching By MS/MS 1 1 1 4301100 1030600 1323900 1946600 1690 1721 1796 5440;5441;5442 3890;3891 3890 3474 2 LNTSDFQKLKR FGDLPRPRLNTSDFQK SDFQKLKRKY______ R L N K R K 0 1 1 1 0 1 0 0 0 0 2 2 0 1 0 1 1 0 0 0 0 0 11 2 1348.7463 Q96B36 Q96B36 244 254 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 3 0.0012575 91.636 By matching By matching By MS/MS 1 1 1 2126800 406830 750140 969830 1691 1721 1797 5443;5444;5445 3892 3892 3474 1 LNTVASPK SKKIKLDRLNTVASPK LNTVASPKDCQELASI R L N P K D 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 8 0 828.47052 Q96T58 Q96T58 1057 1064 SPEN Msx2-interacting protein yes yes 2 0.0093794 110.53 By MS/MS 2 0 0 0 0 1692 1763 1798 5446;5447 3893;3894 3894 2444 2 LNVLEKSSPGHR AISKLEARLNVLEKSS EKSSPGHRATAPQTQH R L N H R A 0 1 1 0 0 0 1 1 1 0 2 1 0 0 1 2 0 0 0 1 0 0 12 1 1335.7259 E9PL71;E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;E9PPR1;E9PL12;E9PQZ1;E9PN91;E9PMW7;E9PK06;H0YCK7 E9PL71 88 99 EEF1D Elongation factor 1-delta yes no 2;3 0.00018507 104.7 By MS/MS By MS/MS By MS/MS 2 2 2 10824000 3981800 3761800 3080800 1693 109 1799 5448;5449;5450;5451;5452;5453 3895;3896;3897;3898 3896 142;143 4 LPATAAEPEAAVISNGEH SPAKKVPRLPATAAEP AVISNGEH________ R L P E H - 5 0 1 0 0 0 3 1 1 1 1 0 0 0 2 1 1 0 0 1 0 0 18 0 1775.869 Q01581 Q01581 503 520 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 2 2.3959E-06 88.319 By MS/MS By matching By matching 1 1 1 2789900 1031200 911430 847260 1694 1331 1800 5454;5455;5456 3899 3899 82 1738 1 LPDLSPVENK AGPIKAQKLPDLSPVE DLSPVENKEHKPGPIG K L P N K E 0 0 1 1 0 0 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1110.5921 E7EPN9;Q9Y520;H7C5N8 E7EPN9 2103 2112 PRRC2C Protein PRRC2C yes no 2 0.004224 72.289 By MS/MS By MS/MS By matching 1 1 1 6986800 2307200 2438900 2240800 1695 526 1801 5457;5458;5459 3900;3901;3902 3902 672 3 LPDSDDDEDEETAIQR QVTLQDYRLPDSDDDE DEETAIQRVLQQLTEE R L P Q R V 1 1 0 5 0 1 3 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 16 0 1846.7705 H3BRM1;H3BRF9;Q96K21 H3BRM1 259 274 ZFYVE19 Abscission/NoCut checkpoint regulator yes no 2 0.00065512 79.804 By matching By MS/MS By MS/MS 1 1 1 10178000 3315200 4026900 2835700 1696 839 1802 5460;5461;5462 3903;3904 3904 1128 2 LPGLVFLYMEK IDQRVLEKLPGLVFLY LVFLYMEKNQLEEVPS K L P E K N 0 0 0 0 0 0 1 1 0 0 3 1 1 1 1 0 0 0 1 1 0 0 11 0 1308.7152 P51888 P51888 149 159 PRELP Prolargin yes yes 2 2.9405E-10 140.83 By MS/MS By MS/MS By MS/MS 1 2 2 33333000 17746000 7075700 8511700 1697 1281 1803;1804 5463;5464;5465;5466;5467 3905;3906;3907;3908 3907 4 LPGSGAVQAASPER APGARLLRLPGSGAVQ VQAASPERAGWTEALR R L P E R A 3 1 0 0 0 1 1 2 0 0 1 0 0 0 2 2 0 0 0 1 0 0 14 0 1338.6892 Q86U90 Q86U90 50 63 YRDC YrdC domain-containing protein, mitochondrial yes yes 2 2.2833E-05 88.311 By MS/MS By MS/MS By MS/MS 1 1 1 3494100 1232300 1307800 954030 1698 1592 1805 5468;5469;5470 3909;3910;3911 3911 2174 3 LPIFSRLSISDD PTLDNSRRLPIFSRLS SRLSISDD________ R L P D D - 0 1 0 2 0 0 0 0 0 2 2 0 0 1 1 3 0 0 0 0 0 0 12 1 1361.7191 Q07352;P47974 Q07352 327 338 ZFP36L1;ZFP36L2 Zinc finger protein 36, C3H1 type-like 1;Zinc finger protein 36, C3H1 type-like 2 yes no 2 0.010855 66.989 By MS/MS By MS/MS 1 1 1948100 1203200 0 744870 1699 1351 1806 5471;5472 3912;3913 3913 1772;1773 2 LPLLPPESPGPLR ERRGGGLRLPLLPPES PESPGPLRQRHVACLA R L P L R Q 0 1 0 0 0 0 1 1 0 0 4 0 0 0 5 1 0 0 0 0 0 0 13 0 1384.8078 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 765 777 SCRIB Protein scribble homolog yes no 2 9.7294E-05 96.23 By MS/MS By MS/MS By MS/MS 1 1 1 4027500 1729400 1125400 1172700 1700 226 1807 5473;5474;5475 3914;3915;3916;3917;3918;3919;3920;3921 3914 304 8 LPLVPESPRR GLEGRPERLPLVPESP LVPESPRRMMTRSQDA R L P R R M 0 2 0 0 0 0 1 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 10 1 1162.6822 C9J0I9;Q86WB0 C9J0I9 272 281 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.0012334 106.16 By MS/MS By MS/MS By MS/MS 1 1 1 10658000 3240500 4051700 3366100 1701 401 1808 5476;5477;5478 3922;3923;3924;3925 3923 535 4 LPSGLPVSLLTLYLDNNK LSFNQIARLPSGLPVS TLYLDNNKISNIPDEY R L P N K I 0 0 2 1 0 0 0 1 0 0 6 1 0 0 2 2 1 0 1 1 0 0 18 0 1956.0932 P51884;CON__Q05443 P51884 199 216 LUM Lumican yes no 2 5.8205E-27 126.09 By MS/MS By MS/MS By MS/MS 1 1 1 38170000 22703000 5771100 9695300 1702 1280 1809 5479;5480;5481 3926;3927;3928 3928 3 LPSLGNKEPPGQEK LQGNVNGRLPSLGNKE KEPPGQEKVQLKRKVT R L P E K V 0 0 1 0 0 1 2 2 0 0 2 2 0 0 3 1 0 0 0 0 0 0 14 1 1492.7886 Q9UPY5 Q9UPY5 24 37 SLC7A11 Cystine/glutamate transporter yes yes 3 0.0045424 59.606 By MS/MS By matching By matching 1 1 1 1995300 842600 885990 266720 1703 1943 1810 5482;5483;5484 3929 3929 2749 1 LPSPEPSMSPK SLTGSYAKLPSPEPSM PEPSMSPKMHRRRSRT K L P P K M 0 0 0 0 0 0 1 0 0 0 1 1 1 0 4 3 0 0 0 0 0 0 11 0 1168.5798 O43303 O43303 364 374 CCP110 Centriolar coiled-coil protein of 110 kDa yes yes 2 0.012055 66.299 By MS/MS 1 0 0 0 0 1704 1005 1811 5485 3930 3930 1338 1 LPSSPVYEDAASFK APQPTEERLPSSPVYE YEDAASFKAELSYRGP R L P F K A 2 0 0 1 0 0 1 0 0 0 1 1 0 1 2 3 0 0 1 1 0 0 14 0 1509.7351 Q14247;H0YEV2;H0YCD9 Q14247 415 428 CTTN Src substrate cortactin yes no 2 1.2641E-05 103.13 By MS/MS By MS/MS By MS/MS 2 2 3 28844000 7251700 12390000 9202600 1705 1408 1812;1813 5486;5487;5488;5489;5490;5491;5492 3931;3932;3933;3934 3933 1878;3840 4 LPTPTSSVPAQK NGASTLSKLPTPTSSV TSSVPAQKTERKESTS K L P Q K T 1 0 0 0 0 1 0 0 0 0 1 1 0 0 3 2 2 0 0 1 0 0 12 0 1224.6714 Q9BTA9 Q9BTA9 291 302 WAC WW domain-containing adapter protein with coiled-coil yes yes 2 0.0079362 83.226 By MS/MS 1 0 0 0 0 1706 1777 1814 5493 3935 3935 3487 1 LQAKESPQR CLAWAPARLQAKESPQ QAKESPQRKKRKSEAV R L Q Q R K 1 1 0 0 0 2 1 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 9 1 1055.5724 Q15061 Q15061 72 80 WDR43 WD repeat-containing protein 43 yes yes 2 0.0065101 83.182 By matching By matching By MS/MS 1 1 1 16655000 5394400 6078600 5182200 1707 1433 1815 5494;5495;5496 3936 3936 1922 1 LQAPDSATLLEK PPRSTFSRLQAPDSAT DSATLLEKMKLKDSLF R L Q E K M 2 0 0 1 0 1 1 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 12 0 1284.6925 A0A087WVQ2;I3L0Y2;I3L4Q4;Q9BUL5 A0A087WVQ2 119 130 PHF23 PHD finger protein 23 yes no 2 0.0075053 61.167 By MS/MS By matching 1 1 1710900 893680 817270 0 1708 51 1816 5497;5498 3937 3937 69;2879 1 LQDEANYHLYGSR NEPSLQSKLQDEANYH NYHLYGSRMDRQTKQQ K L Q S R M 1 1 1 1 0 1 1 1 1 0 2 0 0 0 0 1 0 0 2 0 0 0 13 0 1564.727 Q13546 Q13546 378 390 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 yes yes 3 0.0059188 53.034 By MS/MS By matching By matching 1 1 1 2296000 904140 913600 478250 1709 1395 1817 5499;5500;5501 3938 3938 1850 1 LQDENQKLLQELKMYQR EIALSRNKLQDENQKL QELKMYQRQCQAMEAG K L Q Q R Q 0 1 1 1 0 4 2 0 0 0 4 2 1 0 0 0 0 0 1 0 0 0 17 2 2176.131 E9PPB2;A0A0A0MTD8;A0A088AWP1;E9PIY2;A0A087WVI3;Q05D60 E9PPB2 244 260 CCDC67 Deuterosome protein 1 yes no 3 0.006542 42.813 By MS/MS By matching By matching 1 1 1 2870000 1279700 269180 1321200 1710 50 1818 5502;5503;5504 3939 3939 6 1 LQDVSGQLSSSKK KKKELEKRLQDVSGQL GQLSSSKKPARKEKPG R L Q K K P 0 0 0 1 0 2 0 1 0 0 2 2 0 0 0 4 0 0 0 1 0 0 13 1 1375.7307 Q15059 Q15059 672 684 BRD3 Bromodomain-containing protein 3 yes yes 2 0.016603 46.352 By MS/MS 1 0 0 0 0 1711 1432 1819 5505 3940 3940 1918;1919 1 LQEKTGTYTTNKTK ENFLNISRLQEKTGTY TYTTNKTKNNHVSDLG R L Q T K N 0 0 1 0 0 1 1 1 0 0 1 3 0 0 0 0 5 0 1 0 0 0 14 2 1611.8468 A0A087WXL3;O75417 A0A087WXL3 1426 1439 POLQ DNA polymerase theta yes no 2 0.010971 42.568 By MS/MS By matching By matching 1 1 1 1926700 1127700 459960 339100 1712 72 1820 5506;5507;5508 3941 3941 2885;2886 1 LQHLENELTHDIITK FFLPDEGKLQHLENEL LTHDIITKFLENEDRR K L Q T K F 0 0 1 1 0 1 2 0 2 2 3 1 0 0 0 0 2 0 0 0 0 0 15 0 1802.9527 P01009;A0A0G2JRN3;A0A024R6I7 P01009 284 298 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 4 0.0010715 56.793 By MS/MS 1 650450 650450 0 0 1713 1085 1821 5509 3942 3942 1 LQHSTSILR QQRTRRPKLQHSTSIL QHSTSILRKQAEEEAI K L Q L R K 0 1 0 0 0 1 0 0 1 1 2 0 0 0 0 2 1 0 0 0 0 0 9 0 1053.5931 A0A087WWK8;Q6DN90 A0A087WWK8 70 78 IQSEC1 IQ motif and SEC7 domain-containing protein 1 yes no 2 0.0033387 92.538 By matching By MS/MS By MS/MS 1 1 1 4175500 1361100 1435200 1379200 1714 64 1822 5510;5511;5512 3943;3944 3944 81 2 LQLDNQYAVLENQK VSKNQALKLQLDNQYA YAVLENQKSSHSQYN_ K L Q Q K S 1 0 2 1 0 3 1 0 0 0 3 1 0 0 0 0 0 0 1 1 0 0 14 0 1674.8577 Q9UKY7;D6R9V8 Q9UKY7 238 251 CDV3 Protein CDV3 homolog yes no 3 5.6781E-06 99.481 By MS/MS By MS/MS By MS/MS 1 1 1 2157600 750060 676600 730900 1715 1920 1823 5513;5514;5515 3945;3946;3947 3945 3931 3 LQLEATERQR EEEIRVVRLQLEATER LEATERQRGGAEGELQ R L Q Q R G 1 2 0 0 0 2 2 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 10 1 1242.668 Q15149 Q15149 1596 1605 PLEC Plectin yes yes 2 0.017012 69.198 By MS/MS 1 0 0 0 0 1716 1435 1824 5516 3948 3948 1 LQLQEQLQAETELCAEAEELR QSQLMAEKLQLQEQLQ CAEAEELRARLTAKKQ K L Q L R A 3 1 0 0 1 4 6 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 21 0 2500.2115 P35579 P35579 883 903 MYH9 Myosin-9 yes yes 2;3 1.6854E-70 176.29 By MS/MS By MS/MS By MS/MS 2 2 1 32553000 23457000 5199800 3896200 1717 1221 1825 5517;5518;5519;5520;5521 3949;3950;3951;3952;3953 3951 5 LQLQGLDLSSR SLELEVARLQLQGLDL QGLDLSSRSLLGIDTE R L Q S R S 0 1 0 1 0 2 0 1 0 0 4 0 0 0 0 2 0 0 0 0 0 0 11 0 1228.6776 P49454 P49454 1739 1749 CENPF Centromere protein F yes yes 2 0.0077721 61.435 By MS/MS By matching By matching 1 1 1 511460 191940 175930 143590 1718 1256 1826 5522;5523;5524 3954 3954 1647;1648 1 LQLTDFVSKAYGK KDTASCPKLQLTDFVS FVSKAYGKNLSQERPF K L Q G K N 1 0 0 1 0 1 0 1 0 0 2 2 0 1 0 1 1 0 1 1 0 0 13 1 1468.7926 Q6NXP6 Q6NXP6 284 296 NOXRED1 NADP-dependent oxidoreductase domain-containing protein 1 yes yes 2 0.010079 55.461 By MS/MS By matching By matching 1 1 1 26677000 8497200 9733300 8446500 1719 1542 1827 5525;5526;5527 3955 3955 2096;3428 1 LQPERGSPK AEKHVTQRLQPERGSP QPERGSPKKCEAEEAE R L Q P K K 0 1 0 0 0 1 1 1 0 0 1 1 0 0 2 1 0 0 0 0 0 0 9 1 1010.5509 S4R3H4;E7EQT4;Q9UKV3;A0A087WYN3 S4R3H4 665 673 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0059111 87.181 By matching By MS/MS By MS/MS 1 1 1 27764000 10227000 9818900 7718500 1720 532 1828 5528;5529;5530 3956;3957 3956 686 2 LQPPSFDPSGQPRR AARSLDDRLQPPSFDP DPSGQPRRDLHTSWKR R L Q R R D 0 2 0 1 0 2 0 1 0 0 1 0 0 1 4 2 0 0 0 0 0 0 14 1 1580.8059 F5GWR6;O14529 F5GWR6 176 189 CUX2 Homeobox protein cut-like 2 yes no 2 0.012716 46.352 By matching By MS/MS By matching 1 1 1 4094900 1354000 845200 1895600 1721 632 1829 5531;5532;5533 3958 3958 852 1 LQPQTTYDITVLPIYK VTSTVLKRLQPQTTYD ITVLPIYKMGEGKLRQ R L Q Y K M 0 0 0 1 0 2 0 0 0 2 2 1 0 0 2 0 3 0 2 1 0 0 16 0 1892.0295 D6RGG3;Q99715 D6RGG3 1055 1070 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.0017202 72.705 By MS/MS By matching 1 1 867210 640960 0 226260 1722 497 1830 5534;5535 3959 3959 1 LQQAQKGTPMKPNTQATPP QRKIKKYRLQQAQKGT PNTQATPP________ R L Q P P - 2 0 1 0 0 4 0 1 0 0 1 2 1 0 4 0 3 0 0 0 0 0 19 2 2035.0521 E7ESS4;P05362 E7ESS4 292 310 ICAM1 Intercellular adhesion molecule 1 yes no 3 0.014428 45.395 By MS/MS 1 0 0 0 0 1723 540 1831 5536 3960 3960 3064 1 LQQGAGLESPQGQPEPGAASPQR KTSPGSPRLQQGAGLE PGAASPQRQQDLHLES R L Q Q R Q 3 1 0 0 0 5 2 4 0 0 2 0 0 0 4 2 0 0 0 0 0 0 23 0 2302.1302 Q9H6F5 Q9H6F5 72 94 CCDC86 Coiled-coil domain-containing protein 86 yes yes 3 0.00068108 61.488 By matching By MS/MS By MS/MS 1 1 1 32537000 12598000 12005000 7933500 1724 1825 1832 5537;5538;5539 3961;3962 3962 2561 2 LQQLQACTGQQSCR QAEEETRRLQQLQACT CTGQQSCRQVEELAAE R L Q C R Q 1 1 0 0 2 5 0 1 0 0 2 0 0 0 0 1 1 0 0 0 0 0 14 0 1676.7723 Q96MH2 Q96MH2 234 247 HEXIM2 Protein HEXIM2 yes yes 2 0.0060183 44.863 By matching By MS/MS By matching 1 1 1 2356800 590370 1211600 554740 1725 1748 1833 5540;5541;5542 3963 3963 2413;3481 1 LQQQAALSPTTAPAVSSVSK QEQEIEQRLQQQAALS PAVSSVSKQETIMRHH R L Q S K Q 4 0 0 0 0 3 0 0 0 0 2 1 0 0 2 4 2 0 0 2 0 0 20 0 1983.0637 A0A0U1RR30;A0A0U1RRM1;Q8WXI9 A0A0U1RR30 231 250 GATAD2B Transcriptional repressor p66-beta yes no 3 0.0055327 57.238 By matching By MS/MS By MS/MS 1 1 1 8527500 3367700 3302200 1857600 1726 257 1834 5543;5544;5545 3964;3965 3964 339;2954 2 LQQQHSEQPPLQPSPVMTR MKTRRTTRLQQQHSEQ QPSPVMTRRGLRDSHS R L Q T R R 0 1 0 0 0 5 1 0 1 0 2 0 1 0 4 2 1 0 0 1 0 0 19 0 2200.1059 A0A0A0MSK5;J3KN66;Q5JTV8;H0YDU3 A0A0A0MSK5 9 27 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 4.5893E-05 77.969 By MS/MS By matching By matching 2 1 2 52122000 22976000 10075000 19071000 1727 152 1835;1836 5546;5547;5548;5549;5550 3966;3967 3967 14 204;2921 2 LQSAGSAMPTSSSFK SPALKTTRLQSAGSAM MPTSSSFKHRIKEQED R L Q F K H 2 0 0 0 0 1 0 1 0 0 1 1 1 1 1 5 1 0 0 0 0 0 15 0 1497.7133 H0Y2V6;Q5SW79;H0Y4T4 H0Y2V6 1232 1246 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0022481 66.738 By matching By MS/MS By MS/MS 1 1 1 3380200 1097900 1265500 1016800 1728 743 1837 5551;5552;5553 3968;3969 3968 1014 2 LQSEPQVLLIRAQTLYKK ________________ RAQTLYKKFVKSTGFL K L Q K K F 1 1 0 0 0 3 1 0 0 1 4 2 0 0 1 1 1 0 1 1 0 0 18 2 2127.2416 G3V1Z3 G3V1Z3 5 22 TMEM116 yes yes 3 0.00056545 69.081 By MS/MS By MS/MS 2 1 208620000 208190000 431560 0 1729 713 1838;1839 5554;5555;5556 3970;3971;3972;3973 3972 121;122 963;3143;3699 3 LQSFDSPER RGNDRREKLQSFDSPE QSFDSPERKRIKYSRE K L Q E R K 0 1 0 1 0 1 1 0 0 0 1 0 0 1 1 2 0 0 0 0 0 0 9 0 1077.5091 E9PGM9;P78332 E9PGM9 888 896 RBM6 RNA-binding protein 6 yes no 2 0.0124 65.842 By MS/MS By MS/MS By matching 1 1 1 4158800 1412600 1671000 1075200 1730 583 1840 5557;5558;5559 3974;3975 3975 768;769 2 LQSIGTENTEENR STGSIAKRLQSIGTEN TENTEENRRFYRQLLL R L Q N R R 0 1 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 13 0 1489.7009 J3KPS3;P04075;H3BUH7;H3BQN4;H3BPS8;H3BMQ8;H3BR04 J3KPS3 44 56 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.00056821 83.499 By MS/MS By MS/MS By matching 1 1 1 4591800 1618700 2046200 926920 1731 908 1841 5560;5561;5562 3976;3977 3976 2 LQSIGTENTEENRR STGSIAKRLQSIGTEN ENTEENRRFYRQLLLT R L Q R R F 0 2 2 0 0 1 3 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 14 1 1645.802 J3KPS3;P04075;H3BUH7;H3BQN4;H3BPS8;H3BMQ8;H3BR04 J3KPS3 44 57 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 3 0.00035069 78.324 By MS/MS 1 3118100 0 3118100 0 1732 908 1842 5563 3978 3978 1 LQTLVMGKVSRTCK TLLQQLQKLQTLVMGK GKVSRTCKLAGTQTGT K L Q C K L 0 1 0 0 1 1 0 1 0 0 2 2 1 0 0 1 2 0 0 2 0 0 14 2 1619.8851 Q70SY1 Q70SY1 357 370 CREB3L2 Cyclic AMP-responsive element-binding protein 3-like protein 2;Processed cyclic AMP-responsive element-binding protein 3-like protein 2 yes yes 2 0.014715 45.829 By MS/MS 1 0 0 0 0 1733 1568 1843 5564 3979 3979 2128;3438 1 LQTPNTFPK TPQAKKIKLQTPNTFP QTPNTFPKRKKGEKRA K L Q P K R 0 0 1 0 0 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 0 0 9 0 1044.5604 A0A0A0MRM9;Q14978 A0A0A0MRM9 614 622 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.002946 78.324 By MS/MS By MS/MS By MS/MS 1 1 1 4032600 1561700 1475200 995730 1734 137 1844 5565;5566;5567 3980;3981;3982 3980 2913;2914 3 LQVYEGGGQPPPQDLPGSPK EVAALRKKLQVYEGGG QDLPGSPKSGPPPEHL K L Q P K S 0 0 0 1 0 3 1 4 0 0 2 1 0 0 5 1 0 0 1 1 0 0 20 0 2063.0324 A0A0C4DGP2;A0A0C4DGP5;Q86Y91 A0A0C4DGP2 387 406 KIF18B Kinesin-like protein;Kinesin-like protein KIF18B yes no 3 0.0082423 44.054 By MS/MS By matching 1 1 594930 328030 266900 0 1735 205 1845 5568;5569 3983 3983 287 1 LQWDGSSDLSPSDSGSSK DSQALISRLQWDGSSD PSDSGSSKT_______ R L Q S K T 0 0 0 3 0 1 0 2 0 0 2 1 0 0 1 7 0 1 0 0 0 0 18 0 1851.8123 K7EJK2;K7ENU1;K7EKG9;Q14CW9 K7EJK2 54 71 ATXN7L3 Ataxin-7-like protein 3 yes no 2 0.01439 45.608 By MS/MS By matching 1 1 1471900 0 722860 748990 1736 933 1846 5570;5571 3984 3984 1242;1243;1244 1 LRSADSENALSVQER QYLDPRGRLRSADSEN NALSVQERNVPTKSPS R L R E R N 2 2 1 1 0 1 2 0 0 0 2 0 0 0 0 3 0 0 0 1 0 0 15 1 1673.8333 J3KRN4;J3QRB6;Q99759 J3KRN4 331 345 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 3 0.00078629 74.618 By matching By MS/MS By matching 1 1 1 2198900 795590 848620 554730 1737 915 1847 5572;5573;5574 3985 3985 1226;1227 1 LRSAPAYKMQFK SWYKEHTKLRSAPAYK PAYKMQFKNNVASLVI K L R F K N 2 1 0 0 0 1 0 0 0 0 1 2 1 1 1 1 0 0 1 0 0 0 12 2 1438.7755 A0A0A0MTS7;Q8WZ42 A0A0A0MTS7 8304 8315 TTN Titin yes no 3 0.017563 43.184 By MS/MS 1 0 0 0 0 1738 171 1848 5575 3986 3986 233 1 LRSPSNDSAHR NRSHTSGRLRSPSNDS PSNDSAHRSGDDQSGR R L R H R S 1 2 1 1 0 0 0 0 1 0 1 0 0 0 1 3 0 0 0 0 0 0 11 1 1238.6116 Q5T200 Q5T200 1206 1216 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 3.66E-32 157.09 By MS/MS By MS/MS By matching 1 1 1 6903700 2480000 4366900 56791 1739 1501 1849 5576;5577;5578 3987;3988 3987 2024 2 LRSSVPGVR ATRSSAVRLRSSVPGV RSSVPGVRLLQDSVDF R L R V R L 0 2 0 0 0 0 0 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 9 1 969.57196 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 70 78 VIM Vimentin yes no 2 0.0083416 64.374 By MS/MS By MS/MS 1 1 0 0 0 0 1740 1129 1850 5579;5580 3989;3990 3989 1475;1476 2 LSASSEDISER GKGLCATKLSASSEDI SSEDISERLASISVGP K L S E R L 1 1 0 1 0 0 2 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0 11 0 1192.5572 Q13233 Q13233 920 930 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 yes yes 2 0.010036 58.04 By matching By MS/MS By matching 1 1 1 1661300 619490 488180 553660 1741 1382 1851 5581;5582;5583 3991 3991 1833 1 LSASTASELSPK LPASPRARLSASTASE TASELSPKSKARPSSP R L S P K S 2 0 0 0 0 0 1 0 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1189.619 H0YF21;Q3KQU3 H0YF21 34 45 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.0003306 98.582 By MS/MS By MS/MS By MS/MS 1 1 1 8530600 2927700 2963100 2639900 1742 791 1852 5584;5585;5586 3992;3993;3994;3995 3994 1075;1076 4 LSDAGITPLFLTR QLREAVLKLSDAGITP ITPLFLTRQEDRQLIN K L S T R Q 1 1 0 1 0 0 0 1 0 1 3 0 0 1 1 1 2 0 0 0 0 0 13 0 1402.782 E7ENL6;P12111 E7ENL6 1925 1937 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.011268 65.5 By MS/MS 1 618590 618590 0 0 1743 522 1853 5587 3996 3996 1 LSDGVAVLK KLNERLAKLSDGVAVL SDGVAVLKVGGTSDVE K L S L K V 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 1 0 0 0 2 0 0 9 0 900.52803 P10809 P10809 397 405 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.0057545 90.37 By matching By MS/MS By matching 1 1 1 2039100 395420 1434100 209540 1744 1140 1854 5588;5589;5590 3997 3997 1 LSDGVFKPDTFHGLK LLDLQHNRLSDGVFKP PDTFHGLKNLMQLNLA R L S L K N 0 0 0 2 0 0 0 2 1 0 2 2 0 2 1 1 1 0 0 1 0 0 15 1 1659.8621 P51888 P51888 207 221 PRELP Prolargin yes yes 3 0.0039154 53.001 By MS/MS 1 1213600 1213600 0 0 1745 1281 1855 5591 3998 3998 1 LSEEAECPNPSTPSK REQEMFFKLSEEAECP PNPSTPSKAAKFFPYS K L S S K A 1 0 1 0 1 0 3 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 15 0 1644.7301 O94804 O94804 941 955 STK10 Serine/threonine-protein kinase 10 yes yes 2 0.011666 58.172 By matching By matching By MS/MS 1 1 1 10475000 4079900 3608400 2786900 1746 1050 1856 5592;5593;5594 3999 3999 3265 0 LSETVDKLLSESNER MNDDHNKRLSETVDKL LLSESNERLQLHLKER R L S E R L 0 1 1 1 0 0 3 0 0 0 3 1 0 0 0 3 1 0 0 1 0 0 15 1 1718.8687 R4GN36;O75145 R4GN36 430 444 PPFIA3 Liprin-alpha-3 yes no 3 0.01389 43.594 By matching By matching By MS/MS 1 1 1 6548300 1728100 3092400 1727800 1747 1030 1857 5595;5596;5597 4000 4000 1380;1381 0 LSGEMPPASPSFPR KDRIFPDRLSGEMPPA PASPSFPRNKRTDANE R L S P R N 1 1 0 0 0 0 1 1 0 0 1 0 1 1 4 3 0 0 0 0 0 0 14 0 1471.7129 Q96JM7 Q96JM7 600 613 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 yes yes 2 0.0021141 81.632 By matching By MS/MS By matching 1 1 1 3355300 1143600 1117400 1094300 1748 1744 1858 5598;5599;5600 4001 4001 161 2409 1 LSITGTYDLK SASLHLPKLSITGTYD ITGTYDLKSVLGQLGI K L S L K S 0 0 0 1 0 0 0 1 0 1 2 1 0 0 0 1 2 0 1 0 0 0 10 0 1109.5968 P01009;A0A0G2JRN3;A0A024R6I7 P01009 315 324 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.0020014 104.01 By MS/MS By matching 1 1 2398100 1724300 673730 0 1749 1085 1859 5601;5602 4002 4002 1 LSLEGDHSTPPSAYGSVK TVHEILCKLSLEGDHS PSAYGSVKAYTNFDAE K L S V K A 1 0 0 1 0 0 1 2 1 0 2 1 0 0 2 4 1 0 1 1 0 0 18 0 1843.8952 H0YMD0;H0YMU9;H0YN42;P07355;H0YMM1;H0YKS4;H0YMD9;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMW4;A6NMY6;H0YNB8;H0YKN4 H0YMD0 11 28 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 3 0.0016669 58.98 By MS/MS By matching By matching 1 1 1 4613000 1457900 1850200 1304900 1750 806 1860 5603;5604;5605 4003 4003 1097 1 LSLEIEQLELQR KMALEVYKLSLEIEQL IEQLELQRDSARQSTL K L S Q R D 0 1 0 0 0 2 3 0 0 1 4 0 0 0 0 1 0 0 0 0 0 0 12 0 1469.809 P04003 P04003 574 585 C4BPA C4b-binding protein alpha chain yes yes 2 0.0045911 73.887 By MS/MS By matching By matching 1 1 1 717760 323490 193320 200960 1751 1099 1861 5606;5607;5608 4004 4004 1 LSLLSSTSK VFCSVPGRLSLLSSTS SLLSSTSKYKVTVAEV R L S S K Y 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 4 1 0 0 0 0 0 9 0 934.53351 C9JXZ2;H7C5E5;C1K3N0;Q96SH1;P05549;Q6VUC0;Q92754;Q7Z6R9;Q92481 C9JXZ2 75 83 TFAP2A;TFAP2E;TFAP2C;TFAP2D;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2 gamma;Transcription factor AP-2-delta;Transcription factor AP-2-beta yes no 2 0.014498 73.9 By MS/MS 1 0 0 0 0 1752 392 1862 5609 4005 4005 522;523;524;3015 1 LSMMIQEANAISSK QTTWSSMKLSMMIQEA EANAISSKLKTYYVFG K L S S K L 2 0 1 0 0 1 1 0 0 2 1 1 2 0 0 3 0 0 0 0 0 0 14 0 1521.7531 Q15058 Q15058 1090 1103 KIF14 Kinesin-like protein KIF14 yes yes 2 0.009279 41.227 By matching By MS/MS 1 1 2931700 1885700 0 1046000 1753 1431 1863 5610;5611 4006 4006 1917 1 LSNGSFSAPSLTNSR PKTGLSARLSNGSFSA APSLTNSRGSVHTVSF R L S S R G 1 1 2 0 0 0 0 1 0 0 2 0 0 1 1 5 1 0 0 0 0 0 15 0 1536.7532 O94806 O94806 40 54 PRKD3 Serine/threonine-protein kinase D3 yes yes 2 0.016788 45.915 By matching By MS/MS By matching 1 1 1 1365900 501060 436160 428650 1754 1051 1864 5612;5613;5614 4007 4007 1411 1 LSPENNQVLTKKK GTPGAGGRLSPENNQV NQVLTKKKLQDLVREV R L S K K L 0 0 2 0 0 1 1 0 0 0 2 3 0 0 1 1 1 0 0 1 0 0 13 2 1497.8515 Q16514 Q16514 50 62 TAF12 Transcription initiation factor TFIID subunit 12 yes yes 2 0.012908 44.829 By MS/MS 1 488520 488520 0 0 1755 1456 1865 5615 4008 4008 3390 0 LSPSASPPRR SPPRKTRRLSPSASPP PSASPPRRRHRPSPPA R L S R R R 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 0 0 0 10 1 1066.5883 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 383 392 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.011472 55.37 By MS/MS 1 6844100 0 0 6844100 1756 322 1866 5616 4009 4009 436;437;438 1 LSQELSTVATEK FLKEEKSKLSQELSTV LSTVATEKNKMAGELE K L S E K N 1 0 0 0 0 1 2 0 0 0 2 1 0 0 0 2 2 0 0 1 0 0 12 0 1304.6824 Q5M9N0 Q5M9N0 774 785 CCDC158 Coiled-coil domain-containing protein 158 yes yes 3 0.010341 53.981 By MS/MS 1 0 0 0 0 1757 1492 1867 5617 4010 4010 2006;2007;3408 1 LSSEDEEEDEAEDDQSEASGKK HPSNMMSKLSSEDEEE QSEASGKKSVKG____ K L S K K S 2 0 0 4 0 1 7 1 0 0 1 2 0 0 0 4 0 0 0 0 0 0 22 1 2425.9729 G3V4G1;Q8NEJ9 G3V4G1 116 137 NGDN Neuroguidin yes no 3 3.8398E-06 78.401 By MS/MS By matching By MS/MS 1 1 1 13409000 6756600 3061600 3590500 1758 720 1868 5618;5619;5620 4011;4012 4011 972 2 LSSGAAAPILK L S L K 3 0 0 0 0 0 0 1 0 1 2 1 0 0 1 2 0 0 0 0 0 0 11 0 1026.6073 REV__P51805 yes yes 2 0.016205 53.775 By matching By MS/MS By matching 1 2 1 2943500 672580 1704400 566570 + 1759 2004 1869 5621;5622;5623;5624 4013 4013 2857 1 LSSPVLHR RLSNGLARLSSPVLHR LSSPVLHRLRLREDEN R L S H R L 0 1 0 0 0 0 0 0 1 0 2 0 0 0 1 2 0 0 0 1 0 0 8 0 907.52395 Q16643;D6RCR4;D6R9W4 Q16643 140 147 DBN1 Drebrin yes no 2 0.011767 78.098 By MS/MS By MS/MS By matching 1 1 1 164870000 67732000 53341000 43801000 1760 1457 1870 5625;5626;5627 4014;4015 4014 1953 2 LSSQISAGEEK GWNEKSVKLSSQISAG QISAGEEKWNSVSPAS K L S E K W 1 0 0 0 0 1 2 1 0 1 1 1 0 0 0 3 0 0 0 0 0 0 11 0 1147.5721 E5RJU9;Q86UE4;H0YB56 E5RJU9 270 280 MTDH Protein LYRIC yes no 2 0.00010384 107.39 By MS/MS By MS/MS By MS/MS 1 1 1 43903000 18845000 13713000 11344000 1761 516 1871 5628;5629;5630 4016;4017;4018 4018 652 3 LSSSTTAWSSRRSR LRRPASSRLSSSTTAW AWSSRRSRRRPPGART R L S S R R 1 3 0 0 0 0 0 0 0 0 1 0 0 0 0 6 2 1 0 0 0 0 14 2 1580.8019 A0A087X1A3 A0A087X1A3 49 62 HMHA1 yes yes 2 0.016198 42.336 By MS/MS 1 0 0 0 0 1762 102 1872 5631 4019 4019 128;129;130;131;2897;2898 1 LSSTDDGYIDLQFK SSKVKYSRLSSTDDGY GYIDLQFKKTPPKIPY R L S F K K 0 0 0 3 0 1 0 1 0 1 2 1 0 1 0 2 1 0 1 0 0 0 14 0 1600.7621 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 22 35 TMEM230 Transmembrane protein 230 yes no 2 8.6766E-06 101.95 By MS/MS By matching By matching 1 1 1 7294200 3369500 118150 3806500 1763 27 1873 5632;5633;5634 4020 4020 30;2870 1 LSSTDDGYIDLQFKK SSKVKYSRLSSTDDGY YIDLQFKKTPPKIPYK R L S K K T 0 0 0 3 0 1 0 1 0 1 2 2 0 1 0 2 1 0 1 0 0 0 15 1 1728.857 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 22 36 TMEM230 Transmembrane protein 230 yes no 2 0.0098701 54.784 By matching By matching By MS/MS 1 1 1 5040100 2227100 1435600 1377400 1764 27 1874 5635;5636;5637 4021 4021 30;2870 1 LSSWDQAETPGHTPSLR TPGATPKKLSSWDQAE PGHTPSLRWDETPGRA K L S L R W 1 1 0 1 0 1 1 1 1 0 2 0 0 0 2 3 2 1 0 0 0 0 17 0 1880.9017 O75533 O75533 215 231 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.005856 65.038 By MS/MS By MS/MS By matching 2 2 2 5443600 1782300 1756300 1904900 1765 1035 1875 5638;5639;5640;5641;5642;5643 4022;4023 4023 3255;3256 2 LSSYTECYK LIPIAKKRLSSYTECY SSYTECYKWSSSPENA R L S Y K W 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 2 1 0 2 0 0 0 9 0 1149.5012 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 447 455 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.003281 88.134 By MS/MS By MS/MS By MS/MS 1 1 1 5768000 1954500 2030300 1783200 1766 139 1876 5644;5645;5646 4024;4025;4026 4024 187 3 LSTGTTVEDVQK EYTKPDSRLSTGTTVE TTVEDVQKINKELEKL R L S Q K I 0 0 0 1 0 1 1 1 0 0 1 1 0 0 0 1 3 0 0 2 0 0 12 0 1276.6511 E9PGF6;E9PFQ4;Q86SQ0;G5E9V3 E9PGF6 53 64 PHLDB2 Pleckstrin homology-like domain family B member 2 yes no 2 0.010939 55.721 By matching By MS/MS By matching 1 1 1 2615000 892250 868040 854670 1767 577 1877 5647;5648;5649 4027 4027 759 1 LSTHSPFR RPSEWDKRLSTHSPFR LSTHSPFRTLNINGQI R L S F R T 0 1 0 0 0 0 0 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 8 0 943.48756 P11171;Q4VB86;A0A1B0GWG0 P11171 708 715 EPB41 Protein 4.1 yes no 2 0.015743 71.614 By matching By MS/MS 1 1 1462600 745160 0 717430 1768 1143 1878 5650;5651 4028 4028 1486;3289 1 LSVPTSDEEDEVPAPKPR ELMERLKKLSVPTSDE EVPAPKPRGGKKTKGG K L S P R G 1 1 0 2 0 0 3 0 0 0 1 1 0 0 4 2 1 0 0 2 0 0 18 1 1964.9691 Q5STZ8;Q8NE71;F5GYK6 Q5STZ8 105 122 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2;3 8.8463E-13 100.02 By MS/MS By MS/MS By MS/MS 2 2 2 84817000 26636000 33016000 25165000 1769 1497 1879 5652;5653;5654;5655;5656;5657 4029;4030;4031;4032;4033;4034 4033 2017;3409 6 LSVQSNPSPQLR QLSVQQNKLSVQSNPS SNPSPQLRSVMKVESS K L S L R S 0 1 1 0 0 2 0 0 0 0 2 0 0 0 2 3 0 0 0 1 0 0 12 0 1324.7099 E9PBY7;E9PQ61;O75152 E9PBY7 125 136 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.0032385 71.933 By MS/MS By MS/MS By matching 1 1 1 3283800 1053300 1250200 980290 1770 562 1880 5658;5659;5660 4035;4036 4036 749 2 LSVQSNTSPQLRSVMK QLSVQQNKLSVQSNTS PQLRSVMKVESSENVP K L S M K V 0 1 1 0 0 2 0 0 0 0 2 1 1 0 1 4 1 0 0 2 0 0 16 1 1773.9407 A0A1B0GTU1;A0A1B0GUI2 A0A1B0GTU1 125 140 yes no 3 0.0091887 45.992 By MS/MS By matching By matching 1 1 1 1595400 922390 205760 467220 1771 270 1881 5661;5662;5663 4037 4037 355;2959 0 LSVSPSCTSSTSHR VTNLASRRLSVSPSCT CTSSTSHRNYSFRRGS R L S H R N 0 1 0 0 1 0 0 0 1 0 1 0 0 0 1 6 2 0 0 1 0 0 14 0 1504.694 Q8N2C7 Q8N2C7 1789 1802 UNC80 Protein unc-80 homolog yes yes 2 0.017447 42.395 By MS/MS 1 0 0 0 0 1772 1625 1882 5664 4038 4038 2227;2228;2229;3455 1 LTCLVAELQK TAAEDNVRLTCLVAEL CLVAELQKQWEVTQAT R L T Q K Q 1 0 0 0 1 1 1 0 0 0 3 1 0 0 0 0 1 0 0 1 0 0 10 0 1173.6427 Q9BQS8 Q9BQS8 291 300 FYCO1 FYVE and coiled-coil domain-containing protein 1 yes yes 2 0.0091492 67.169 By MS/MS By matching 1 1 2371300 1512100 0 859250 1773 1775 1883 5665;5666 4039 4039 1 LTCLVTDLTTYDSVTISWTR IFLTKSTKLTCLVTDL SVTISWTRQNGEAVKT K L T T R Q 0 1 0 2 1 0 0 0 0 1 3 0 0 0 0 2 6 1 1 2 0 0 20 0 2344.1621 A0A087WYJ9;A0A1B0GUU9;P04220;P01871 A0A087WYJ9 241 260 IGHM Ig mu heavy chain disease protein;Ig mu chain C region yes no 2;3 4.3254E-06 88.561 By MS/MS By MS/MS By MS/MS 4 3 4 18102000 6012200 7392000 4698200 1774 80 1884 5667;5668;5669;5670;5671;5672;5673;5674;5675;5676;5677 4040;4041;4042;4043;4044;4045;4046;4047;4048 4041 9 LTDYISKVKE QQEEGINRLTDYISKV DYISKVKE________ R L T K E - 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 1 1 0 1 1 0 0 10 2 1194.6496 O75915 O75915 179 188 ARL6IP5 PRA1 family protein 3 yes yes 2 0.0038606 65.157 By matching By MS/MS By matching 1 1 1 1150600 413670 372940 363960 1775 1043 1885 5678;5679;5680 4049 4049 3754 1 LTEGCSFR QPTGGKARLTEGCSFR LTEGCSFRRKQH____ R L T F R R 0 1 0 0 1 0 1 1 0 0 1 0 0 1 0 1 1 0 0 0 0 0 8 0 968.43857 C9J1C5;H0YMV8;Q71UM5;P42677 C9J1C5 41 48 RPS27L;RPS27 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 2 0.0081107 107.21 By MS/MS By MS/MS By MS/MS 1 1 1 11713000 4635300 3633700 3443900 1776 405 1886 5681;5682;5683 4050;4051;4052 4052 544 3 LTEQNEQKAK EQTLLVEKLTEQNEQK EQNEQKAKTIAALRTD K L T A K T 1 0 1 0 0 2 2 0 0 0 1 2 0 0 0 0 1 0 0 0 0 0 10 1 1187.6146 H7BZ55 H7BZ55 327 336 Putative ciliary rootlet coiled-coil protein-like 3 protein yes yes 3 0.016326 44.616 By MS/MS 1 0 0 0 0 1777 858 1887 5684 4053 4053 3187 1 LTFDSSFSPNTGK DQLARGLKLTFDSSFS SFSPNTGKKNAKIKTG K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 3 2 0 0 0 0 0 13 0 1399.662 C9JI87;P21796 C9JI87 97 109 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 0.0034139 70.68 By MS/MS By matching By MS/MS 1 1 1 2965000 921180 894410 1149400 1778 437 1888 5685;5686;5687 4054;4055 4054 574;575;3024 2 LTFDSSFSPNTGKK DQLARGLKLTFDSSFS FSPNTGKKNAKIKTGY K L T K K N 0 0 1 1 0 0 0 1 0 0 1 2 0 2 1 3 2 0 0 0 0 0 14 1 1527.7569 C9JI87;P21796 C9JI87 97 110 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 2 0.018645 44.925 By matching By MS/MS By matching 1 1 1 13768000 4750500 5623400 3393600 1779 437 1889 5688;5689;5690 4056 4056 574;575;3024 0 LTFDTTFSPNTGK DQICQGLKLTFDTTFS TFSPNTGKKSGKIKSS K L T G K K 0 0 1 1 0 0 0 1 0 0 1 1 0 2 1 1 4 0 0 0 0 0 13 0 1427.6933 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880 Q5JSD2 108 120 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 2 0.0046359 68.171 By MS/MS By matching By MS/MS 1 1 1 2218300 749910 657850 810520 1780 125 1890 5691;5692;5693 4057;4058 4058 166 2 LTPGLLSQEAAQKWTYTMR FVLLVICKLTPGLLSQ QKWTYTMREGRWEKRS K L T M R E 2 1 0 0 0 2 1 1 0 0 3 1 1 0 1 1 3 1 1 0 0 0 19 1 2193.1252 A8MX76 A8MX76 335 353 CAPN14 Calpain-14 yes yes 3 0.017492 40.014 By MS/MS 1 0 0 0 0 1781 319 1891 5694 4059 4059 2978;2979;3622 1 LTPLLSVRESLSEEEAQK WQKTFEEKLTPLLSVR LSEEEAQKMGRKDPEQ K L T Q K M 1 1 0 0 0 1 4 0 0 0 4 1 0 0 1 3 1 0 0 1 0 0 18 1 2028.0739 Q9BXP5;H7C3A1 Q9BXP5 670 687 SRRT Serrate RNA effector molecule homolog yes no 3 0.0055573 42.708 By MS/MS By matching By matching 1 1 1 2514500 948300 977980 588260 1782 1795 1892 5695;5696;5697 4060 4060 2493;2494;2495 1 LTPVSLSNSPIK VTKELYVKLTPVSLSN SLSNSPIKGADCQEVP K L T I K G 0 0 1 0 0 0 0 0 0 1 2 1 0 0 2 3 1 0 0 1 0 0 12 0 1254.7184 P46100 P46100 590 601 ATRX Transcriptional regulator ATRX yes yes 2 0.0047549 69.345 By MS/MS By MS/MS By MS/MS 1 1 1 4225200 1194700 1629100 1401400 1783 1243 1893 5698;5699;5700 4061;4062;4063 4063 1620;1621 3 LTPVSPESSSTEEK EHGGKRSRLTPVSPES ESSSTEEKSSSQPSSC R L T E K S 0 0 0 0 0 0 3 0 0 0 1 1 0 0 2 4 2 0 0 1 0 0 14 0 1489.7148 E7EMC7;Q13501 E7EMC7 268 281 SQSTM1 Sequestosome-1 yes no 2 0.001285 72.815 By MS/MS By matching By matching 1 1 1 5371700 1970200 1758900 1642500 1784 519 1894 5701;5702;5703 4064 4064 657 1 LTRLLQDSLGGNSK HVPYRNSKLTRLLQDS DSLGGNSKTMMCANIG K L T S K T 0 1 1 1 0 1 0 2 0 0 4 1 0 0 0 2 1 0 0 0 0 0 14 1 1500.826 J3KPF9;A0A087X011;E9PES4;Q9Y496 J3KPF9 302 315 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A yes no 2 0.008794 49.5 By MS/MS By matching By matching 1 1 1 2862400 1210100 826140 826200 1785 91 1895 5704;5705;5706 4065 4065 8 111 0 LTRPAASPAVGEK SPSPAREKLTRPAASP ASPAVGEKLKKTEPAA K L T E K L 3 1 0 0 0 0 1 1 0 0 1 1 0 0 2 1 1 0 0 1 0 0 13 1 1295.7197 F5H0Q6;A0A0A0MQS2;Q8N2M8 F5H0Q6 541 553 CLASRP CLK4-associating serine/arginine rich protein yes no 2;3 0.0073863 58.671 By MS/MS By MS/MS By matching 2 2 2 7377500 2375900 2709800 2291800 1786 123 1896 5707;5708;5709;5710;5711;5712 4066;4067;4068 4066 163 3 LTSMHFYGWKQGLKTGMYYLR IAEPNYGKLTSMHFYG KTGMYYLRTRPAANPI K L T L R T 0 1 0 0 0 1 0 3 1 0 3 2 2 1 0 1 2 1 3 0 0 0 21 2 2579.2817 E9PL69;P23921 E9PL69 498 518 RRM1 Ribonucleoside-diphosphate reductase large subunit yes no 3;4 0.0025095 53.779 By matching By MS/MS By MS/MS 1 2 2 139560000 77540000 21504000 40518000 1787 603 1897 5713;5714;5715;5716;5717 4069;4070 4069 120 44 810 2 LTSQSEAMALQSIR ESSKNKSRLTSQSEAM AMALQSIRNMRGNSHC R L T I R N 2 1 0 0 0 2 1 0 0 1 2 0 1 0 0 3 1 0 0 0 0 0 14 0 1533.7821 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C0A7 A0A087X1U1 496 509 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.013751 65.395 By MS/MS By matching By matching 1 1 1 2213900 864030 818910 531000 1788 107 1898 5718;5719;5720 4071 4071 135 1 LTTTGQVTSPVK KKAVVQAKLTTTGQVT GQVTSPVKGASFVTST K L T V K G 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 1 4 0 0 2 0 0 12 0 1230.682 P49916;K7ENR9;K7ERZ5 P49916 202 213 LIG3 DNA ligase 3 yes no 2 1.662E-28 149.82 By MS/MS By MS/MS By MS/MS 1 1 1 49161000 16288000 19289000 13584000 1789 1265 1899 5721;5722;5723 4072;4073;4074 4072 1674 3 LTTTGQVTSPVKGASFVTSTNPR KKAVVQAKLTTTGQVT FVTSTNPRKFSGFSAK K L T P R K 1 1 1 0 0 1 0 2 0 0 1 1 0 1 2 3 6 0 0 3 0 0 23 1 2348.2336 P49916;K7ENR9;K7ERZ5 P49916 202 224 LIG3 DNA ligase 3 yes no 3 1.2345E-11 88 By MS/MS By matching By matching 1 1 1 16473000 5336200 5166100 5970700 1790 1265 1900 5724;5725;5726 4075 4075 1674 1 LTTTSGQSRK ETLPAGFRLTTTSGQS TTSGQSRKMTTDVASS R L T R K M 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 2 3 0 0 0 0 0 10 1 1077.5778 H0YHK3;G3V200;O75334 H0YHK3 1072 1081 PPFIA2 Liprin-alpha-2 yes no 2 0.009538 45.68 By MS/MS By matching By matching 1 1 1 1254200 379270 502010 372960 1791 714 1901 5727;5728;5729 4076 4076 3144;3145;3146 1 LTVENSPK NFPNEFAKLTVENSPK LTVENSPKQEAGISEG K L T P K Q 0 0 1 0 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 8 0 886.476 F8VVL1;O43583 F8VVL1 68 75 DENR Density-regulated protein yes no 2 0.012454 89.029 By MS/MS By MS/MS By matching 1 1 1 1691200 619950 564070 507200 1792 674 1902 5730;5731;5732 4077;4078 4077 900 2 LTWDPTSRQINGYR NVGSNSARLTWDPTSR SRQINGYRIVYNNADG R L T Y R I 0 2 1 1 0 1 0 1 0 1 1 0 0 0 1 1 2 1 1 0 0 0 14 1 1705.8536 Q05707;H0YBB2;J3QT83 Q05707 553 566 COL14A1 Collagen alpha-1(XIV) chain yes no 3 0.012096 42.647 By MS/MS By matching 1 1 1973500 968810 1004700 0 1793 1346 1903 5733;5734 4079 4079 3349;3350 1 LTWHSCPEDEAQ VIAFYEERLTWHSCPE SCPEDEAQ________ R L T A Q - 1 0 0 1 1 1 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 0 12 0 1471.6038 Q13185 Q13185 172 183 CBX3 Chromobox protein homolog 3 yes yes 2 4.7331E-78 170.89 By MS/MS By MS/MS 2 2 12320000 0 6789000 5531000 1794 1380 1904;1905 5735;5736;5737;5738 4080;4081;4082 4082 1830 3 LTYAYFAGGDAGDAFDGFDFGDDPSDK GPEADKYRLTYAYFAG FGDDPSDKFFTSHNGM R L T D K F 4 0 0 7 0 0 0 5 0 0 1 1 0 4 1 1 1 0 2 0 0 0 27 0 2833.1668 C9JEU5;C9JC84;P02679 C9JEU5 310 336 FGG Fibrinogen gamma chain yes no 2 0.0022353 51.265 By MS/MS By matching 1 1 12501000 0 6844000 5657200 1795 429 1906 5739;5740 4083 4083 1 LTYLRGIYSK NIEDQNRKLTYLRGIY YLRGIYSKKQHKTSCE K L T S K K 0 1 0 0 0 0 0 1 0 1 2 1 0 0 0 1 1 0 2 0 0 0 10 1 1212.6867 A0A0C4DGG5;Q9P2F6 A0A0C4DGG5 400 409 ARHGAP20 Rho GTPase-activating protein 20 yes no 2 0.0084682 45.891 By matching By matching By MS/MS 1 1 1 1246500 395800 392250 458490 1796 197 1907 5741;5742;5743 4084 4084 273;3597;3598 1 LVAIVDVIDQNR SFGPHAGKLVAIVDVI VDVIDQNRALVDGPCT K L V N R A 1 1 1 2 0 1 0 0 0 2 1 0 0 0 0 0 0 0 0 3 0 0 12 0 1353.7616 P50914;E7EPB3 P50914 24 35 RPL14 60S ribosomal protein L14 yes no 2 0.0016464 85.377 By MS/MS By MS/MS By MS/MS 1 1 1 2304600 940840 715170 648600 1797 1271 1908 5744;5745;5746 4085;4086;4087 4085 3 LVDYLDVGFDTTR YVRTLIERLVDYLDVG DVGFDTTRVAVIQFSD R L V T R V 0 1 0 3 0 0 0 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1512.746 E7ENL6;P12111 E7ENL6 651 663 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.0029802 77.64 By MS/MS By MS/MS By MS/MS 1 1 1 1818400 671470 724090 422870 1798 522 1909 5747;5748;5749 4088;4089;4090 4090 3 LVEQANSPK QEELASGKLVEQANSP VEQANSPKHQWGEEEP K L V P K H 1 0 1 0 0 1 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 9 0 984.52401 O95391 O95391 209 217 SLU7 Pre-mRNA-splicing factor SLU7 yes yes 2 0.0024267 97.452 By MS/MS By matching 1 1 1631300 0 846900 784370 1799 1067 1910 5750;5751 4091 4091 1433 1 LVHTSPNYR ESLTAESRLVHTSPNY VHTSPNYRLIKSRSES R L V Y R L 0 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 1 0 1 1 0 0 9 0 1085.5618 H0YNB1;Q15751 H0YNB1 482 490 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes no 2 0.015639 50.452 By MS/MS 1 0 0 0 0 1800 809 1911 5752 4092 4092 1098;3174 1 LVIITAGAR YNVTANSKLVIITAGA VIITAGARQQEGESRL K L V A R Q 2 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 1 0 0 1 0 0 9 0 912.57565 P00338;F5GXH2;F5GYU2;F5GXY2 P00338 91 99 LDHA L-lactate dehydrogenase A chain yes no 2 0.0084419 116.88 By MS/MS By matching 1 1 2067400 715090 1352300 0 1801 1077 1912 5753;5754 4093 4093 1 LVINGNPITIFQER TVKAENGKLVINGNPI PITIFQERDPSKIKWG K L V E R D 0 1 2 0 0 1 1 1 0 3 1 0 0 1 1 0 1 0 0 1 0 0 14 0 1612.8937 P04406 P04406 67 80 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes yes 2 0.01762 51.979 By MS/MS By matching 1 1 1393300 1042900 0 350450 1802 1103 1913 5755;5756 4094 4094 1 LVLAESPQPK GEHQQNSKLVLAESPQ LAESPQPKGKNK____ K L V P K G 1 0 0 0 0 1 1 0 0 0 2 1 0 0 2 1 0 0 0 1 0 0 10 0 1080.6179 E7EUR8;A0A1B0GVL4;P78312 E7EUR8 993 1002 FAM193A Protein FAM193A yes no 2 0.005175 67.456 By MS/MS By MS/MS By MS/MS 1 1 1 4044000 1295000 1549300 1199700 1803 283 1914 5757;5758;5759 4095;4096;4097 4097 375 3 LVLEVAQHLGESTVR EVQGRETRLVLEVAQH HLGESTVRTIAMDGTE R L V V R T 1 1 0 0 0 1 2 1 1 0 3 0 0 0 0 1 1 0 0 3 0 0 15 0 1649.9101 P06576 P06576 95 109 ATP5B ATP synthase subunit beta, mitochondrial yes yes 3 0.00080845 66.285 By MS/MS By matching 1 1 579100 392960 0 186140 1804 1112 1915 5760;5761 4098 4098 1 LVLLNAIYLSAK DSLPSDTRLVLLNAIY NAIYLSAKWKTTFDPK R L V A K W 2 0 1 0 0 0 0 0 0 1 4 1 0 0 0 1 0 0 1 1 0 0 12 0 1316.8068 H9KV48;P05155 H9KV48 287 298 SERPING1 Plasma protease C1 inhibitor yes no 2 3.237E-05 107.83 By MS/MS By MS/MS By MS/MS 1 1 1 3897600 2171900 789190 936420 1805 880 1916 5762;5763;5764 4099;4100;4101 4099 3 LVNEAPVYSVYSK EALELYNKLVNEAPVY PVYSVYSKLHPPAHYP K L V S K L 1 0 1 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 2 3 0 0 13 0 1467.7609 O75886 O75886 364 376 STAM2 Signal transducing adapter molecule 2 yes yes 2 0.0033513 70.808 By MS/MS By matching 1 1 1666100 0 966240 699830 1806 1042 1917 5765;5766 4102 4102 1399 1 LVNEVTEFAK CPFEDHVKLVNEVTEF NEVTEFAKTCVADESA K L V A K T 1 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 1 0 0 2 0 0 10 0 1148.6077 A0A0C4DGB6;CON__P02768-1;P02768;A0A087WWT3;H7C013 A0A0C4DGB6 66 75 ALB Serum albumin yes no 2 0.0028641 82.749 By MS/MS By matching By matching 1 1 1 4306600 2648400 813020 845120 + 1807 194 1918 5767;5768;5769 4103 4103 1 LVQAFQFTDK RSVDETLRLVQAFQFT QAFQFTDKHGE_____ R L V D K H 1 0 0 1 0 2 0 0 0 0 1 1 0 2 0 0 1 0 0 1 0 0 10 0 1195.6237 A0A0A0MSI0;Q06830;A0A0A0MRQ5 A0A0A0MSI0 159 168 PRDX1 Peroxiredoxin-1 yes no 2 0.010488 66.351 By matching By MS/MS 1 1 1200500 506000 694480 0 1808 150 1919 5770;5771 4104;4105 4104 2 LVQDVANNTNEEAGDGTTTATVLAR KYKNIGAKLVQDVANN TTATVLARSIAKEGFE K L V A R S 4 1 3 2 0 1 2 2 0 0 2 0 0 0 0 0 5 0 0 3 0 0 25 0 2559.2413 P10809;C9JL25;E7EXB4;E7ESH4 P10809 97 121 HSPD1 60 kDa heat shock protein, mitochondrial yes no 3 4.8186E-05 48.872 By MS/MS By MS/MS By matching 1 1 1 6470800 2084300 2681700 1704800 1809 1140 1920 5772;5773;5774 4106;4107 4106 2 LVSFHDDSDEDLLHI QKTVSSTKLVSFHDDS SDEDLLHI________ K L V H I - 0 0 0 4 0 0 1 0 2 1 3 0 0 1 0 2 0 0 0 1 0 0 15 0 1753.8159 P11717 P11717 2477 2491 IGF2R Cation-independent mannose-6-phosphate receptor yes yes 3 0.00051894 77.068 By MS/MS By MS/MS By MS/MS 1 1 1 4211700 1749200 988350 1474100 1810 1147 1921 5775;5776;5777 4108;4109;4110 4108 1498 3 LWAYLTIQELLAK MLENHVERLWAYLTIQ TIQELLAKRMKVDREE R L W A K R 2 0 0 0 0 1 1 0 0 1 4 1 0 0 0 0 1 1 1 0 0 0 13 0 1560.8916 P19827;H7C0N0;CON__Q0VCM5 P19827 565 577 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 2 4.6444E-05 89.548 By matching By MS/MS By matching 1 1 1 10240000 4236900 3291200 2711500 1811 1178 1922 5778;5779;5780 4111 4111 1 LWPMQARSNGTK GFPQDQIRLWPMQARS QARSNGTKRPAMLDNE R L W T K R 1 1 1 0 0 1 0 1 0 0 1 1 1 0 1 1 1 1 0 0 0 0 12 1 1387.7031 H3BND8;Q93009 H3BND8 523 534 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 2 0.0042755 60.478 By MS/MS 1 0 0 0 0 1812 822 1923 5781 4112 4112 42 61 1105;3181 1 LWSGYSLLYFEGQEK MCPVGMNKLWSGYSLL LYFEGQEKAHNQDLGL K L W E K A 0 0 0 0 0 1 2 2 0 0 3 1 0 1 0 2 0 1 2 0 0 0 15 0 1818.8829 P08572 P08572 1511 1525 COL4A2 Collagen alpha-2(IV) chain;Canstatin yes yes 2 0.0046666 64.199 By matching By MS/MS 1 1 4844100 2494800 0 2349300 1813 1128 1924 5782;5783 4113 4113 1 LYALKQSSILNQLLL IISEDTSKLYALKQSS SILNQLLL________ K L Y L L - 1 0 1 0 0 2 0 0 0 1 6 1 0 0 0 2 0 0 1 0 0 0 15 1 1716.0186 H7C460;Q9NRM2 H7C460 104 118 ZNF277 Zinc finger protein 277 yes no 2 0.015087 44.863 By MS/MS 1 0 0 0 0 1814 873 1925 5784 4114 4114 1171;1172 1 LYDLNMPAYVK SFVDPGERLYDLNMPA LNMPAYVKF_______ R L Y V K F 1 0 1 1 0 0 0 0 0 0 2 1 1 0 1 0 0 0 2 1 0 0 11 0 1325.669 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333 C9K098 104 114 NCK1 Cytoplasmic protein NCK1 yes no 2 0.0019017 72.325 By MS/MS By MS/MS By matching 2 2 2 3247700 916550 1292900 1038200 1815 419 1926;1927 5785;5786;5787;5788;5789;5790 4115;4116;4117;4118 4117 32 3645 4 LYDLPDEPFTR IRKKWNSKLYDLPDEP LPDEPFTRQFYFVHSA K L Y T R Q 0 1 0 2 0 0 1 0 0 0 2 0 0 1 2 0 1 0 1 0 0 0 11 0 1364.6612 Q96NW4 Q96NW4 927 937 ANKRD27 Ankyrin repeat domain-containing protein 27 yes yes 2 0.0066308 67.704 By matching By MS/MS By MS/MS 1 1 1 1994800 692330 550320 752180 1816 1751 1928 5791;5792;5793 4119;4120 4120 3895 2 LYEALTPVH MVELAAQRLYEALTPV YEALTPVH________ R L Y V H - 1 0 0 0 0 0 1 0 1 0 2 0 0 0 1 0 1 0 1 1 0 0 9 0 1041.5495 G5E9W3;Q9UKF6 G5E9W3 639 647 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 2 0.014605 89.355 By MS/MS 1 275500 0 275500 0 1817 740 1929 5794 4121 4121 3157 1 LYEEDDLDRLEQMEDSEGTVR FKPGLDMRLYEEDDLD EDSEGTVRQIGAFSEG R L Y V R Q 0 2 0 4 0 1 5 1 0 0 3 0 1 0 0 1 1 0 1 1 0 0 21 1 2541.1177 H0YFE4;Q86W92 H0YFE4 181 201 PPFIBP1 Liprin-beta-1 yes no 3 0.0030334 51.225 By MS/MS By MS/MS By matching 2 2 2 5305000 2727100 907990 1670000 1818 792 1930;1931 5795;5796;5797;5798;5799;5800 4122;4123 4123 57 3711 2 LYEQLSGK EWDDYVPKLYEQLSGK LYEQLSGK________ K L Y G K - 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 1 0 0 1 0 0 0 8 0 936.49165 P30086 P30086 180 187 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 2 0.013538 77.318 By matching By MS/MS 1 1 627650 0 350030 277630 1819 1207 1932 5801;5802 4124 4124 3775 1 LYEWISIDKDEAGAK ERLGTRERLYEWISID DKDEAGAKSKAPSVSR R L Y A K S 2 0 0 2 0 0 2 1 0 2 1 2 0 0 0 1 0 1 1 0 0 0 15 1 1736.8621 A0A0A0MTP6;O15357 A0A0A0MTP6 819 833 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2;3 0.0018518 68.551 By matching By MS/MS By MS/MS 1 1 2 2942900 1181300 1050300 711360 1820 168 1933 5803;5804;5805;5806 4125;4126 4125 3592 2 LYGSVCDLR PPRSEVKRLYGSVCDL YGSVCDLRTNKLPGSP R L Y L R T 0 1 0 1 1 0 0 1 0 0 2 0 0 0 0 1 0 0 1 1 0 0 9 0 1081.5226 Q8N9U0 Q8N9U0 153 161 TC2N Tandem C2 domains nuclear protein yes yes 2 0.0023642 98.523 By matching By MS/MS By MS/MS 1 1 1 992480 304430 375270 312780 1821 1643 1934 5807;5808;5809 4127;4128 4128 3875 2 LYLPQEPTSEETPR TPPPKPPRLYLPQEPT PTSEETPRTKRPHMEP R L Y P R T 0 1 0 0 0 1 3 0 0 0 2 0 0 0 3 1 2 0 1 0 0 0 14 0 1658.8152 Q6P5Z2 Q6P5Z2 516 529 PKN3 Serine/threonine-protein kinase N3 yes yes 2 0.0028592 68.893 By MS/MS 1 713470 713470 0 0 1822 1550 1935 5810 4129 4129 3867 1 LYLSHNQLSEIPLNLPK LTTKKLRRLYLSHNQL EIPLNLPKSLAELRIH R L Y P K S 0 0 2 0 0 1 1 0 1 1 5 1 0 0 2 2 0 0 1 0 0 0 17 0 1978.0888 Q9BXN1;Q5TBF2 Q9BXN1 155 171 ASPN Asporin yes no 3 0.016226 36.583 By MS/MS By matching By matching 1 1 1 1099000 625060 216710 257220 1823 1794 1936 5811;5812;5813 4130 4130 1 LYLVQGTQVYVFLTK AAFSWEEKLYLVQGTQ QVYVFLTKGGYTLVSG K L Y T K G 0 0 0 0 0 2 0 1 0 0 3 1 0 1 0 0 2 0 2 3 0 0 15 0 1770.992 P02790 P02790 318 332 HPX Hemopexin yes yes 2 2.21E-16 113.22 By MS/MS By MS/MS 1 1 8171300 0 3141500 5029800 1824 1098 1937 5814;5815 4131;4132 4131 2 LYNTLDDLLLYINAR GRLLEYYRLYNTLDDL LLLYINARELRITYGQ R L Y A R E 1 1 2 2 0 0 0 0 0 1 5 0 0 0 0 0 1 0 2 0 0 0 15 0 1808.9672 Q6UX06 Q6UX06 305 319 OLFM4 Olfactomedin-4 yes yes 2;3 7.8911E-299 170.95 By matching By MS/MS By MS/MS 1 3 3 104350000 31480000 34700000 38167000 1825 1561 1938;1939 5816;5817;5818;5819;5820;5821;5822 4133;4134;4135;4136;4137 4137 97 5 LYQTINSLKTK ________________ TINSLKTKNPKLKILL M L Y T K N 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 1 2 0 1 0 0 0 11 1 1307.7449 E9PRL9;E9PII8;E9PPX4 E9PRL9 2 12 CHI3L2 yes no 2 0.017961 40.058 By MS/MS 1 0 0 0 0 1826 586 1940 5823 4138 4138 777;3091 1 LYTLVTYVPVTTFK EDEDSPNKLYTLVTYV YVPVTTFKNLQTVNVD K L Y F K N 0 0 0 0 0 0 0 0 0 0 2 1 0 1 1 0 4 0 2 3 0 0 14 0 1643.9174 P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8 P62899 102 115 RPL31 60S ribosomal protein L31 yes no 2 0.013743 54.776 By MS/MS 1 568600 568600 0 0 1827 1314 1941 5824 4139 4139 1 LYVYNDGYLLNYDLSVLQKPQ NYNPFDQKLYVYNDGY LSVLQKPQ________ K L Y P Q - 0 0 2 2 0 2 0 1 0 0 5 1 0 0 1 1 0 0 4 2 0 0 21 1 2517.2791 Q6UX06 Q6UX06 490 510 OLFM4 Olfactomedin-4 yes yes 2;3 1.9928E-97 164.15 By MS/MS By MS/MS By MS/MS 2 2 2 101240000 36045000 37429000 27769000 1828 1561 1942 5825;5826;5827;5828;5829;5830 4140;4141;4142;4143;4144 4144 5 MAAQPSWLVK MAKDYMERMAAQPSWL AQPSWLVKDAPWDEVP R M A V K D 2 0 0 0 0 1 0 0 0 0 1 1 1 0 1 1 0 1 0 1 0 0 10 0 1129.5954 Q9UL01;X6REM1 Q9UL01 133 142 DSE Dermatan-sulfate epimerase yes no 2 0.010867 55.314 By matching By MS/MS 1 1 696640 345320 0 351310 1829 1921 1943 5831;5832 4145 4145 2713 0 MALDIEIATYR YQDLLNVKMALDIEIA DIEIATYRKLLEGEES K M A Y R K 2 1 0 1 0 0 1 0 0 2 1 0 1 0 0 0 1 0 1 0 0 0 11 0 1294.6591 P08670;B0YJC4;B0YJC5;H7C5W5;P41219 P08670 391 401 VIM;PRPH Vimentin;Peripherin yes no 2 0.0063232 90.629 By matching By MS/MS By MS/MS 1 1 1 1806000 792530 502830 510620 1830 1129 1944 5833;5834;5835 4146;4147 4146 97 2 MAMARRTMFQK MIISKKKRMAMARRTM ARRTMFQKGEVHNKPS R M A Q K G 2 2 0 0 0 1 0 0 0 0 0 1 3 1 0 0 1 0 0 0 0 0 11 2 1369.6781 A0A087WW78;A0A087WW82;U3KPV2;E9PKY3;P0CG08;B7ZAQ6 A0A087WW78 40 50 GPR89B;GPR89A Golgi pH regulator B;Golgi pH regulator A yes no 2 0.0030396 61.962 By MS/MS 1 0 0 0 0 1831 59 1945 5836 4148 4148 5;6 1 MAMVSEFLK ________________ AMVSEFLKQAWFIENE - M A L K Q 1 0 0 0 0 0 1 0 0 0 1 1 2 1 0 1 0 0 0 1 0 0 9 0 1054.5191 Q5T3N0;Q5T3N1;P04083 Q5T3N0 1 9 ANXA1 Annexin;Annexin A1 yes no 2 0.0034237 83.948 By MS/MS By matching By matching 1 1 1 3121600 981500 1168100 972020 1832 1101 1946 5837;5838;5839 4149 4149 1453 1 MANSSPVLSK SAGRSQKKMANSSPVL NSSPVLSKVPGYGLQV K M A S K V 1 0 1 0 0 0 0 0 0 0 1 1 1 0 1 3 0 0 0 1 0 0 10 0 1032.5274 Q9NXE8 Q9NXE8 214 223 CWC25 Pre-mRNA-splicing factor CWC25 homolog yes yes 2 1.1451E-05 96.034 By matching By MS/MS By MS/MS 1 1 1 772910 395490 0 377420 1833 1875 1947 5840;5841;5842 4150;4151 4150 2643 2 MAPALSGANLTSPR PASLTSARMAPALSGA GANLTSPRVPLSAYER R M A P R V 3 1 1 0 0 0 0 1 0 0 2 0 1 0 2 2 1 0 0 0 0 0 14 0 1384.7133 Q9UQ35 Q9UQ35 2371 2384 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.000334 82.417 By MS/MS By MS/MS By MS/MS 1 1 2 3494000 1178300 1320200 995480 1834 1945 1948 5843;5844;5845;5846 4152;4153;4154 4154 176 2757;3539 2 MAPPVDDLSPK NCKICIGRMAPPVDDL PVDDLSPKKVKVVVGV R M A P K K 1 0 0 2 0 0 0 0 0 0 1 1 1 0 3 1 0 0 0 1 0 0 11 0 1168.5798 Q92576;E7ER40;E7EVH3 Q92576 1125 1135 PHF3 PHD finger protein 3 yes no 2 0.0028265 78.964 By MS/MS By MS/MS By MS/MS 2 2 2 14347000 4341400 5323900 4682200 1835 1697 1949;1950 5847;5848;5849;5850;5851;5852 4155;4156;4157;4158;4159;4160;4161 4155 2328 6 MAPTPIPTRSPSDSSTASTPVAEQIER SHLDSHRRMAPTPIPT PVAEQIERALDEVTSS R M A E R A 3 2 0 1 0 1 2 0 0 2 0 0 1 0 5 5 4 0 0 1 0 0 27 1 2825.3865 Q16643;D6R9Q9 Q16643 328 354 DBN1 Drebrin yes no 3 0.00085861 54.259 By MS/MS 1 1806600 1806600 0 0 1836 1457 1951 5853 4162 4162 143 1954;1955 1 MAVTFIGNSTAIQELFK DIPPRGLKMAVTFIGN TAIQELFKRISEQFTA K M A F K R 2 0 1 0 0 1 1 1 0 2 1 1 1 2 0 1 2 0 0 1 0 0 17 0 1868.9706 Q5JP53;P07437;Q5ST81 Q5JP53 345 361 TUBB Tubulin beta chain yes no 2 2.4066E-96 165.7 By MS/MS By MS/MS By MS/MS 3 3 3 74727000 36044000 17407000 21277000 1837 1118 1952;1953;1954 5854;5855;5856;5857;5858;5859;5860;5861;5862 4163;4164;4165;4166;4167;4168;4169;4170;4171;4172 4166 65 91 10 MDATANDVPSDR QKGLVIAKMDATANDV ANDVPSDRYKVEGFPT K M D D R Y 2 1 1 3 0 0 0 0 0 0 0 0 1 0 1 1 1 0 0 1 0 0 12 0 1290.551 P13667 P13667 583 594 PDIA4 Protein disulfide-isomerase A4 yes yes 2 0.0049304 72.848 By MS/MS 1 260930 0 260930 0 1838 1155 1955 5863 4173 4173 1 MDKNASTFEDVTQVSSAYQK KYGVQKDRMDKNASTF QVSSAYQKTVPVEAVT R M D Q K T 2 0 1 2 0 2 1 0 0 0 0 2 1 1 0 3 2 0 1 2 0 0 20 1 2248.0318 Q14247 Q14247 317 336 CTTN Src substrate cortactin yes yes 3 0.0020592 50.226 By MS/MS By matching 1 1 5696900 3704100 1992800 0 1839 1408 1956 5864;5865 4174 4174 142 3841 1 MDPIYHTR LDIFGPQKMDPIYHTR MDPIYHTRELPTSSAI K M D T R E 0 1 0 1 0 0 0 0 1 1 0 0 1 0 1 0 1 0 1 0 0 0 8 0 1031.4859 Q12923 Q12923 359 366 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 yes yes 2 0.018763 58.23 By MS/MS 1 0 0 0 0 1840 1369 1957 5866 4175 4175 3831 1 MDSDEDEKEGEEEKVAK EEEHKKQKMDSDEDEK GEEEKVAKRKAAVLSD K M D A K R 1 0 0 3 0 0 6 1 0 0 0 3 1 0 0 1 0 0 0 1 0 0 17 2 1966.8313 Q96ST2 Q96ST2 375 391 IWS1 Protein IWS1 homolog yes yes 3 0.0017473 56.774 By MS/MS By matching 1 1 5145800 3294500 1851300 0 1841 1759 1958 5867;5868 4176 4176 163 2433 1 MDSFDEDLAR REAQVNVRMDSFDEDL SFDEDLARPSGLLAQE R M D A R P 1 1 0 3 0 0 1 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 10 0 1197.4972 Q9Y2W1 Q9Y2W1 573 582 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.013697 72.289 By MS/MS By matching By MS/MS 2 2 2 3524600 808870 1583100 1132600 1842 1960 1959;1960 5869;5870;5871;5872;5873;5874 4177;4178 4177 2802 2 MDSNFGLAGLPGSPK PVDMESTRMDSNFGLA AGLPGSPKKRVRIECK R M D P K K 1 0 1 1 0 0 0 3 0 0 2 1 1 1 2 2 0 0 0 0 0 0 15 0 1489.7235 O43463 O43463 379 393 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 yes yes 2 0.0068794 52.071 By MS/MS 1 644390 644390 0 0 1843 1010 1961 5875 4179 4179 74 1345 0 MEAVNLLSSNRYTEK ________________ SSNRYTEKQIGYLFIS - M E E K Q 1 1 2 0 0 0 2 0 0 0 2 1 1 0 0 2 1 0 1 1 0 0 15 1 1753.8669 E9PPZ3;E9PS94;E9PQP4 E9PPZ3 1 15 AP2A2 yes no 3 0.013364 47.201 By MS/MS 1 0 0 0 0 1844 615 1962 5876 4180 4180 3102;3679 1 MENYELIHSSR FGNKTTGKMENYELIH YELIHSSRVKFTYPSE K M E S R V 0 1 1 0 0 0 2 0 1 1 1 0 1 0 0 2 0 0 1 0 0 0 11 0 1377.6347 Q9Y2I1 Q9Y2I1 1304 1314 NISCH Nischarin yes yes 2;3 0.0024444 78.513 By MS/MS By MS/MS By MS/MS 3 3 3 7647700 2801500 2734500 2111700 1845 1955 1963;1964 5877;5878;5879;5880;5881;5882;5883;5884;5885 4181;4182;4183;4184;4185;4186;4187 4187 178 3936 7 METVSNASSSSNPSSPGR QSQTKSSRMETVSNAS SNPSSPGRIKGRLDSS R M E G R I 1 1 2 0 0 0 1 1 0 0 0 0 1 0 2 7 1 0 0 1 0 0 18 0 1793.785 Q9NTI5;A9IYQ1 Q9NTI5 1152 1169 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 2 5.0156E-97 165.66 By MS/MS By MS/MS By matching 2 1 1 4287900 1662600 1682500 942800 1846 1860 1965;1966 5886;5887;5888;5889 4188;4189;4190 4188 168 2626;2627;2628 3 METVSNASSSSNPSSPGRIK QSQTKSSRMETVSNAS PSSPGRIKGRLDSSEM R M E I K G 1 1 2 0 0 0 1 1 0 1 0 1 1 0 2 7 1 0 0 1 0 0 20 1 2034.964 Q9NTI5;A9IYQ1 Q9NTI5 1152 1171 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 3 0.0039833 54.728 By matching By MS/MS By matching 1 1 1 4632500 1968200 1347600 1316800 1847 1860 1967 5890;5891;5892 4191 4191 2626;2627;2628 1 MGPTELLIEMEDWK DKISQLTRMGPTELLI LIEMEDWKGDKVKAHY R M G W K G 0 0 0 1 0 0 3 1 0 1 2 1 2 0 1 0 1 1 0 0 0 0 14 0 1690.7946 P02675;D6REL8 P02675 335 348 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 2 9.9146E-145 190.46 By MS/MS By MS/MS By matching 1 1 1 25798000 12592000 6574300 6631600 1848 1094 1968 5893;5894;5895 4192;4193 4192 80 2 MGTAENQNKLFMRMASK NDLVKNEKMGTAENQN LFMRMASKQLRENVLV K M G S K Q 2 1 2 0 0 1 1 1 0 0 1 2 3 1 0 1 1 0 0 0 0 0 17 2 1955.938 H0YE03;H7C3G7;Q2TBE0 H0YE03 489 505 CWF19L2 CWF19-like protein 2 yes no 2 0.016758 40.725 By MS/MS 1 0 0 0 0 1849 788 1969 5896 4194 4194 1073 1 MHIEKDETPLSTPTAR DMGHESKRMHIEKDET PLSTPTARDSLDKLSL R M H A R D 1 1 0 1 0 0 2 0 1 1 1 1 1 0 2 1 3 0 0 0 0 0 16 1 1824.904 A0A087WZP2;Q9UI36 A0A087WZP2 571 586 DACH1 Dachshund homolog 1 yes no 3 0.00094113 68.168 By MS/MS By MS/MS By MS/MS 1 1 1 4247400 1455700 1291100 1500600 1850 87 1970 5897;5898;5899 4195;4196;4197 4196 105;2891 3 MHTYGIIYTGYATK SIEEEDPKMHTYGIIY IYTGYATKHVVEGLEP K M H T K H 1 0 0 0 0 0 0 2 1 2 0 1 1 0 0 0 3 0 3 0 0 0 14 0 1617.7861 C9JD80;A0A1B0GX87;A6NKD7;A6NP17;A6NH44;Q8TC84 C9JD80 50 63 FANK1 Fibronectin type 3 and ankyrin repeat domains protein 1 yes no 3 0.0099979 40.577 By MS/MS 1 0 0 0 0 1851 289 1971 5900 4198 4198 2965;2966;2967;3614;3615;3616 1 MIFEGPNKLSPR VARDGPTKMIFEGPNK GPNKLSPRIDGPP___ K M I P R I 0 1 1 0 0 0 1 1 0 1 1 1 1 1 2 1 0 0 0 0 0 0 12 1 1387.7282 E9PKN0;E9PQ01;O94913 E9PKN0 768 779 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 2 0.0078532 61.167 By MS/MS 1 0 0 0 0 1852 600 1972 5901 4199 4199 808 1 MILLNNSER ________________ ILLNNSERLLALFKSL - M I E R L 0 1 2 0 0 0 1 0 0 1 2 0 1 0 0 1 0 0 0 0 0 0 9 0 1088.5648 A0A0U1RQE8 A0A0U1RQE8 1 9 yes yes 2 0.01373 56.81 By MS/MS 1 0 0 0 0 1853 248 1973 5902 4200 4200 332 1 MISTPSPK MDYDLELKMISTPSPK MISTPSPKKSMKMTMY K M I P K K 0 0 0 0 0 0 0 0 0 1 0 1 1 0 2 2 1 0 0 0 0 0 8 0 859.44734 Q53F19 Q53F19 410 417 C17orf85 Uncharacterized protein C17orf85 yes yes 2 0.012086 61.958 By MS/MS 1 0 0 0 0 1854 1478 1974 5903 4201 4201 1983;1984 1 MKKVGTAQTK IDPWKFQRMKKVGTAQ KVGTAQTKIQLLLLGD R M K T K I 1 0 0 0 0 1 0 1 0 0 0 3 1 0 0 0 2 0 0 1 0 0 10 2 1090.6169 Q9BVV2 Q9BVV2 111 120 C20orf195 Uncharacterized protein C20orf195 yes yes 2 0.012878 44.299 By matching By matching By MS/MS 1 1 1 5147700 1108100 982800 3056800 1855 1786 1975 5904;5905;5906 4202 4202 3489;3490 1 MKSLEQDALR RALWRAARMKSLEQDA SLEQDALRAQMVLSRS R M K L R A 1 1 0 1 0 1 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 10 1 1189.6125 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1425 1434 SCRIB Protein scribble homolog yes no 2;3 0.0070368 74.698 By MS/MS By matching By MS/MS 2 3 3 17145000 4250200 6823500 6071200 1856 226 1976;1977 5907;5908;5909;5910;5911;5912;5913;5914 4203;4204;4205;4206 4204 305 4 MKTPLSAFSEK FADRLPEKMKTPLSAF PLSAFSEKLSSDAVTQ K M K E K L 1 0 0 0 0 0 1 0 0 0 1 2 1 1 1 2 1 0 0 0 0 0 11 1 1237.6377 A0A087WV20;A0A087WTU9;A0A087WZY3;Q8TCU4 A0A087WV20 3185 3195 ALMS1 Alstrom syndrome protein 1 yes no 3 0.0047866 62.14 By MS/MS 1 0 0 0 0 1857 30 1978 5915 4207 4207 2872 1 MLENTDNSSPSTEHSQGLEK YKHMKLHKMLENTDNS EHSQGLEKQGVHAAGA K M L E K Q 0 0 2 1 0 1 3 1 1 0 2 1 1 0 1 4 2 0 0 0 0 0 20 0 2202.9699 Q96H79 Q96H79 249 268 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 3 0.015599 46.543 By MS/MS By matching 1 1 1472000 722910 749080 0 1858 1738 1979 5916;5917 4208 4208 2388 1 MLLADQGQSWKEEVVTVETWQEGSLK RGRCAALRMLLADQGQ TWQEGSLKASCLYGQL R M L L K A 1 0 0 1 0 3 4 2 0 0 3 2 1 0 0 2 2 2 0 3 0 0 26 1 2990.4695 P09211;A0A087X2E9;A8MX94 P09211 20 45 GSTP1 Glutathione S-transferase P yes no 3 9.1178E-06 71.54 By MS/MS By matching By MS/MS 1 1 1 7564400 3293900 1659100 2611300 1859 1130 1980 5918;5919;5920 4209;4210 4209 98 2 MLNQSENAKK AWLEDAEKMLNQSENA NQSENAKKDFFRNLPH K M L K K D 1 0 2 0 0 1 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 0 10 1 1161.5812 F5H422;F5H4Q0;F5GXQ8;E7ENN3;A0A0C4DG40;Q8NF91 F5H422 202 211 SYNE1 Nesprin-1 yes no 2 0.0067382 51.193 By matching By matching By MS/MS 1 1 1 1304000 421460 527000 355580 1860 190 1981 5921;5922;5923 4211 4211 15 1 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR QRLFENLRMLPHAPGV DEDDPDKRISICSSDK R M L K R I 3 1 0 6 0 2 5 2 1 2 1 1 2 0 5 1 0 0 0 1 0 0 33 1 3630.609 Q13547 Q13547 372 404 HDAC1 Histone deacetylase 1 yes yes 4 1.8544E-05 49.888 By matching By MS/MS 1 1 11508000 4756000 0 6751700 1861 1396 1982 5924;5925 4212 4212 139;140 1851 1 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR QRLFENLRMLPHAPGV DGEDPDKRISIRASDK R M L K R I 3 1 0 6 0 2 4 3 2 1 1 1 2 0 4 1 0 0 0 2 0 0 33 1 3584.5784 Q92769 Q92769 373 405 HDAC2 Histone deacetylase 2 yes yes 4 1.2552E-09 58.47 By MS/MS By MS/MS By MS/MS 2 2 2 40414000 18015000 7553900 14845000 1862 1708 1983;1984 5926;5927;5928;5929;5930;5931 4213;4214;4215;4216 4215 158;159 2348 4 MLSQDAPTVK SKMEQKFRMLSQDAPT SQDAPTVKESCKTSSN R M L V K E 1 0 0 1 0 1 0 0 0 0 1 1 1 0 1 1 1 0 0 1 0 0 10 0 1088.5536 A0A0C4DG07;O60934 A0A0C4DG07 313 322 NBN Nibrin yes no 2 0.0099221 62.338 By matching By MS/MS 1 1 1259700 574810 0 684890 1863 184 1985 5932;5933 4217 4217 256 1 MLSSTQNAGGSYQR ________________ NAGGSYQRVRGALDTQ - M L Q R V 1 1 1 0 0 2 0 2 0 0 1 0 1 0 0 3 1 0 1 0 0 0 14 0 1498.6834 Q9NSE7 Q9NSE7 1 14 ABCC13 Putative ATP-binding cassette sub-family C member 13 yes yes 2 0.015412 45.359 By MS/MS 1 278840 278840 0 0 1864 1856 1986 5934 4218 4218 2617;3512;3915 0 MLSSTQNAGGSYQRVR ________________ GGSYQRVRGALDTQKC - M L V R G 1 2 1 0 0 2 0 2 0 0 1 0 1 0 0 3 1 0 1 1 0 0 16 1 1753.853 Q9NSE7 Q9NSE7 1 16 ABCC13 Putative ATP-binding cassette sub-family C member 13 yes yes 3 0.016609 40.801 By MS/MS 1 0 0 0 0 1865 1856 1987 5935 4219 4219 2617;3512;3915 1 MLVEATR ENEEAVKKMLVEATRE KMLVEATREFEEVVVD K M L T R E 1 1 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 7 0 818.43202 Q9NYB0 Q9NYB0 253 259 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 2 0.005266 95.909 By MS/MS 1 0 0 0 0 1866 1877 1988 5936 4220 4220 172 3520 1 MMLSGGAPLSPQTHR ALLGGNVRMMLSGGAP PLSPQTHRFMNVCFCC R M M H R F 1 1 0 0 0 1 0 2 1 0 2 0 2 0 2 2 1 0 0 0 0 0 15 0 1581.7756 H0Y9A0;O60488 H0Y9A0 42 56 ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes no 2 0.011722 42.785 By MS/MS 1 314320 0 314320 0 1867 773 1989 5937 4221 4221 1056 0 MNGGVQTWTQPR ________________ VQTWTQPRLCYLVKEG - M N P R L 0 1 1 0 0 2 0 2 0 0 0 0 1 0 1 0 2 1 0 1 0 0 12 0 1373.651 A8MUH7 A8MUH7 1 12 PDZK1P1 Putative PDZ domain-containing protein 1P yes yes 2 0.012314 66.023 By MS/MS By MS/MS By matching 2 2 2 9468200 3775100 2828600 2864500 1868 318 1990;1991 5938;5939;5940;5941;5942;5943 4222;4223 4223 2977 2 MNSTGGQTPR EQMPQRRRMNSTGGQT STGGQTPRRDLEKVLT R M N P R R 0 1 1 0 0 1 0 2 0 0 0 0 1 0 1 1 2 0 0 0 0 0 10 0 1047.4767 Q96ST2;A0A1B0GW95 Q96ST2 718 727 IWS1 Protein IWS1 homolog yes no 2 0.0071838 70.685 By MS/MS By matching By MS/MS 1 1 1 1759300 704950 626060 428290 1869 1759 1992 5944;5945;5946 4224;4225 4225 164 2434 0 MNSYPYLADR PSSQRKVRMNSYPYLA SYPYLADRHYSREQRY R M N D R H 1 1 1 1 0 0 0 0 0 0 1 0 1 0 1 1 0 0 2 0 0 0 10 0 1228.5547 G3V1T9;J3KPD3;Q9Y580 G3V1T9 82 91 RBM7 RNA-binding protein 7 yes no 2 0.0048287 69.216 By matching By matching By MS/MS 1 1 1 1857300 630360 642740 584150 1870 711 1993 5947;5948;5949 4226 4226 958 1 MNTQKGSLTINVHR ________________ SLTINVHRGSLAMSIQ - M N H R G 0 1 2 0 0 1 0 1 1 1 1 1 1 0 0 1 2 0 0 1 0 0 14 1 1597.8359 A0A140T8X2;Q6ZTR5 A0A140T8X2 1 14 CXorf22 Uncharacterized protein CXorf22 yes no 2 0.013078 48.823 By MS/MS 1 0 0 0 0 1871 264 1994 5950 4227 4227 2957;2958 1 MPCAEDYLSVVLNQLCVLHEK CKHPEAKRMPCAEDYL QLCVLHEKTPVSDRVT R M P E K T 1 0 1 1 2 1 2 0 1 0 4 1 1 0 1 1 0 0 1 3 0 0 21 0 2517.2066 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 470 490 ALB Serum albumin yes no 3 1.1593E-50 138.46 By MS/MS By MS/MS By MS/MS 2 2 2 51784000 21705000 12976000 17104000 + 1872 194 1995;1996 5951;5952;5953;5954;5955;5956 4228;4229;4230;4231;4232;4233 4228 18 6 MPCESSPPESADTPTSTR VAAGKTTKMPCESSPP ADTPTSTRRQPKTPLE K M P T R R 1 1 0 1 1 0 2 0 0 0 0 0 1 0 4 4 3 0 0 0 0 0 18 0 1948.8143 P46013 P46013 1371 1388 MKI67 Antigen KI-67 yes yes 2 0.0011036 74.338 By MS/MS By MS/MS By MS/MS 1 1 1 4507800 1464000 1549100 1494600 1873 1241 1997 5957;5958;5959 4234;4235;4236;4237 4235 1609 4 MPFQTSPGGK SPGKLLVKMPFQTSPG FQTSPGGKAEGGGATT K M P G K A 0 0 0 0 0 1 0 2 0 0 0 1 1 1 2 1 1 0 0 0 0 0 10 0 1048.5012 A0A087X1U4;P51608 A0A087X1U4 220 229 MECP2 Methyl-CpG-binding protein 2 yes no 2 0.00040871 115 By matching By MS/MS By MS/MS 1 1 1 4235300 1211300 1536400 1487700 1874 108 1998 5960;5961;5962 4238;4239 4238 139;2902 2 MPLYDNQK ________________ MPLYDNQKARSVMNEC - M P Q K A 0 0 1 1 0 1 0 0 0 0 1 1 1 0 1 0 0 0 1 0 0 0 8 0 1007.4746 C9JF16 C9JF16 1 8 KANSL3 yes yes 2 0.013873 46.994 By MS/MS 1 0 0 0 0 1875 431 1999 5963 4240 4240 3646 1 MPMYSLGMAHHTPK CLISPNWRMPMYSLGM GMAHHTPKSIFAAWCF R M P P K S 1 0 0 0 0 0 0 1 2 0 1 1 3 0 2 1 1 0 1 0 0 0 14 0 1599.736 F8WDS5 F8WDS5 136 149 POLR3H yes yes 2 0.01855 41.704 By MS/MS 1 0 0 0 0 1876 701 2000 5964 4241 4241 940;3139;3697 1 MPPLIADSPK GLKPHPERMPPLIADS PLIADSPKARCPLDAL R M P P K A 1 0 0 1 0 0 0 0 0 1 1 1 1 0 3 1 0 0 0 0 0 0 10 0 1067.5685 A0A087WXX9;P54646 A0A087WXX9 370 379 PRKAA2 5-AMP-activated protein kinase catalytic subunit alpha-2 yes no 2 0.013266 65.246 By MS/MS 1 0 0 0 0 1877 75 2001 5965 4242 4242 91 1 MPQDGSDDEDEEWPTLEK RTTRLGPRMPQDGSDD EEWPTLEKAATMTAAG R M P E K A 0 0 0 4 0 1 4 1 0 0 1 1 1 0 2 1 1 1 0 0 0 0 18 0 2119.8528 F8WBL2;Q13895 F8WBL2 93 110 BYSL Bystin yes no 2 9.6912E-33 133.98 By MS/MS By MS/MS By MS/MS 2 2 2 53750000 19184000 18764000 15802000 1878 696 2002;2003 5966;5967;5968;5969;5970;5971 4243;4244;4245;4246 4246 49 934 4 MQASIEKGGSLPK SVEDIKAKMQASIEKG EKGGSLPKVEAKFINY K M Q P K V 1 0 0 0 0 1 1 2 0 1 1 2 1 0 1 2 0 0 0 0 0 0 13 1 1344.7071 P06748 P06748 251 263 NPM1 Nucleophosmin yes yes 2 0.0072767 69.314 By MS/MS By MS/MS By MS/MS 1 2 1 4907200 1376400 2527400 1003400 1879 1114 2004 5972;5973;5974;5975 4247;4248;4249 4248 1459 3 MQKASHKNK ________________ QKASHKNKKERGVSNK - M Q N K K 1 0 1 0 0 1 0 0 1 0 0 3 1 0 0 1 0 0 0 0 0 0 9 2 1070.5655 E5RJ18;Q8IXQ8 E5RJ18 1 9 PDZD9 PDZ domain-containing protein 9 yes no 2 0.0061614 61.999 By MS/MS 1 0 0 0 0 1880 512 2005 5976 4250 4250 30 36 1 MQNNEELPTYEEAK MEKQLSPRMQNNEELP LPTYEEAKVQSQYFRG R M Q A K V 1 0 2 0 0 1 4 0 0 0 1 1 1 0 1 0 1 0 1 0 0 0 14 0 1694.7458 Q4VCS5 Q4VCS5 100 113 AMOT Angiomotin yes yes 2 3.3966E-221 206.1 By MS/MS By MS/MS By MS/MS 1 1 1 14460000 5143900 5681100 3635300 1881 1474 2006 5977;5978;5979 4251;4252;4253 4251 144 3399;3857 3 MQNNEELPTYEEAKVQSQYFR MEKQLSPRMQNNEELP KVQSQYFRGQQHASVG R M Q F R G 1 1 2 0 0 3 4 0 0 0 1 1 1 1 1 1 1 0 2 1 0 0 21 1 2603.1962 Q4VCS5 Q4VCS5 100 120 AMOT Angiomotin yes yes 3 0.0013953 67.579 By MS/MS By matching By matching 1 1 1 3673200 1933000 648430 1091800 1882 1474 2007 5980;5981;5982 4254 4254 144 3399;3857 1 MQQSGHPWSGPK VLEKEASKMQQSGHPW GHPWSGPKPRLTSSVK K M Q P K P 0 0 0 0 0 2 0 2 1 0 0 1 1 0 2 2 0 1 0 0 0 0 12 0 1338.6139 Q08426 Q08426 351 362 EHHADH Peroxisomal bifunctional enzyme;Enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase;3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.0092962 51.528 By matching By matching By MS/MS 1 1 1 1219600 355980 697480 166110 1883 1355 2008 5983;5984;5985 4255 4255 1777 0 MQSLSLNK DATLSGKRMQSLSLNK MQSLSLNK________ R M Q N K - 0 0 1 0 0 1 0 0 0 0 2 1 1 0 0 2 0 0 0 0 0 0 8 0 919.4797 Q13442 Q13442 174 181 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 2 0.012231 76.943 By matching By matching By MS/MS 1 1 1 4736100 1354300 1666600 1715200 1884 1391 2009 5986;5987;5988 4256 4256 1846 1 MRDVVLSIVNDLTIAESNCPR VNQDTFGRMRDVVLSI IAESNCPRGARVAVVT R M R P R G 1 2 2 2 1 0 1 0 0 2 2 0 1 0 1 2 1 0 0 3 0 0 21 1 2401.2094 E7ENL6;P12111 E7ENL6 1813 1833 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.0022917 53.454 By matching By MS/MS By MS/MS 1 1 1 4772500 1379100 1619600 1773800 1885 522 2010 5989;5990;5991 4257;4258 4257 37 2 MREDYDSVEQDGDEPGPQR SEEGSRARMREDYDSV GDEPGPQRSVEGWILF R M R Q R S 0 2 0 4 0 2 3 2 0 0 0 0 1 0 2 1 0 0 1 1 0 0 19 1 2221.9182 Q9Y5S9 Q9Y5S9 50 68 RBM8A RNA-binding protein 8A yes yes 3 0.0021055 58.864 By MS/MS By MS/MS By MS/MS 2 1 2 5734000 2472100 681500 2580300 1886 1975 2011;2012 5992;5993;5994;5995;5996 4259;4260;4261 4261 2824 3 MSGFIYQGK LMLSASPRMSGFIYQG SGFIYQGKLPTTGMTI R M S G K L 0 0 0 0 0 1 0 2 0 1 0 1 1 1 0 1 0 0 1 0 0 0 9 0 1029.4954 E9PDQ5;B1ALK7;Q15052;Q14155;F6SJA5;E7EUY6 E9PDQ5 261 269 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 6;Rho guanine nucleotide exchange factor 7 yes no 2 0.01503 82.831 By MS/MS By matching By matching 1 1 1 7100400 3105900 2243800 1750700 1887 329 2013 5997;5998;5999 4262 4262 456 1 MSLNEHSMQALSWR ________________ SMQALSWRKLYLSRAK - M S W R K 1 1 1 0 0 1 1 0 1 0 2 0 2 0 0 3 0 1 0 0 0 0 14 0 1688.7763 A0A087WTK9;A0A0B4J2E8 A0A087WTK9 1 14 ORAI1 yes no 2 0.0070223 51.127 By MS/MS 1 2778600 2778600 0 0 1888 23 2014 6000 4263 4263 24;25 1 MSQDSVHHTSGDK VKVEEQRKMSQDSVHH VHHTSGDKSTDYANFY K M S D K S 0 0 0 2 0 1 0 1 2 0 0 1 1 0 0 3 1 0 0 1 0 0 13 0 1427.6099 O75563 O75563 282 294 SKAP2 Src kinase-associated phosphoprotein 2 yes yes 2 0.016546 43.184 By MS/MS 1 0 0 0 0 1889 1036 2015 6001 4264 4264 1391;1392;1393 1 MSQPGSPSPK AEVEENKKMSQPGSPS QPGSPSPKTPTPSTPG K M S P K T 0 0 0 0 0 1 0 1 0 0 0 1 1 0 3 3 0 0 0 0 0 0 10 0 1014.4804 F5GWX5;A0A0C4DGG9;Q14839 F5GWX5 1523 1532 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0034256 105.1 By MS/MS By MS/MS By MS/MS 2 2 3 13572000 4419500 4895600 4257300 1890 198 2016;2017 6002;6003;6004;6005;6006;6007;6008 4265;4266;4267;4268;4269;4270;4271;4272;4273 4266 20 274;275 9 MSTADLMENLR ________________ ADLMENLREELTCFIC - M S L R E 1 1 1 1 0 0 1 0 0 0 2 0 2 0 0 1 1 0 0 0 0 0 11 0 1279.5901 Q8N9V2 Q8N9V2 1 11 TRIML1 Probable E3 ubiquitin-protein ligase TRIML1 yes yes 2 0.0020688 59.153 By matching By MS/MS 1 1 711910 0 344620 367300 1891 1644 2018 6009;6010 4274 4274 102 155;156 1 MSVEKMTKVEESFQK ________________ KVEESFQKAMGLKKTV - M S Q K A 0 0 0 0 0 1 3 0 0 0 0 3 2 1 0 2 1 0 0 2 0 0 15 2 1799.8798 Q5VU69 Q5VU69 1 15 C1orf189 Uncharacterized protein C1orf189 yes yes 3 0.0073781 40.085 By matching By MS/MS By matching 1 1 1 10167000 4770600 2955700 2441100 1892 1519 2019 6011;6012;6013 4275 4275 148;149 2058 1 MSVLYSSSSKQFSSSR ________________ SKQFSSSRSGGGGGGG - M S S R S 0 1 0 0 0 1 0 0 0 0 1 1 1 1 0 8 0 0 1 1 0 0 16 1 1779.8461 CON__P02535-1 CON__P02535-1 1 16 yes yes 2 0.015013 43.794 By MS/MS 1 0 0 0 0 + 1893 465 2020 6014 4276 4276 610;611 1 MSYIPGQPVTAVVQR ________________ PVTAVVQRVEIHKLRQ - M S Q R V 1 1 0 0 0 2 0 1 0 1 0 0 1 0 2 1 1 0 1 3 0 0 15 0 1644.8658 A0A087X282;O14907 A0A087X282 1 15 TAX1BP3 Tax1-binding protein 3 yes no 2 0.0037297 47.532 By matching By MS/MS By matching 1 1 1 1355100 513770 328010 513360 1894 112 2021 6015;6016;6017 4277 4277 10 145;3585 1 MTEVQAMVEFSVELNK ________________ EFSVELNKFYNVDLFQ - M T N K F 1 0 1 0 0 1 3 0 0 0 1 1 2 1 0 1 1 0 0 3 0 0 16 0 1853.8903 D6RFG9;D6REA8;H7BXC5;D6RC17;D6RCC7;Q9P2D6 D6RFG9 1 16 FAM135A Protein FAM135A yes no 2 0.0078842 56.359 By matching By MS/MS 1 1 2302800 969860 0 1332900 1895 492 2022 6018;6019 4278 4278 635;3040 1 MTPEKHLNSLRNLAK NVGSFTDRMTPEKHLN NSLRNLAKSLDAEQDT R M T A K S 1 1 2 0 0 0 1 0 1 0 3 2 1 0 1 1 1 0 0 0 0 0 15 2 1750.9512 A0A0R4J2F1;Q5VYP0;Q5VU36;Q5TZJ5 A0A0R4J2F1 368 382 SPATA31A3;SPATA31A5;SPATA31A1 Spermatogenesis-associated protein 31A3;Spermatogenesis-associated protein 31A5;Spermatogenesis-associated protein 31A1 yes no 2 0.017006 51.03 By MS/MS 1 0 0 0 0 1896 245 2023 6020 4279 4279 2952 1 MTSAPSQPLQTISRNK DPKSSSSRMTSAPSQP LQTISRNKPSGITRGQ R M T N K P 1 1 1 0 0 2 0 0 0 1 1 1 1 0 2 3 2 0 0 0 0 0 16 1 1757.9094 Q5T670;Q7L590 Q5T670 206 221 MCM10 Protein MCM10 homolog yes no 2 0.017263 40.856 By MS/MS 1 0 0 0 0 1897 1508 2024 6021 4280 4280 2039;3416;3417 1 MTVHNLYLFDR ________________ HNLYLFDRNGVCLHYS - M T D R N 0 1 1 1 0 0 0 0 1 0 2 0 1 1 0 0 1 0 1 1 0 0 11 0 1407.6969 I3L1R8;I3L3V5;I3L3S0;Q9Y5R8 I3L1R8 1 11 TRAPPC1 Trafficking protein particle complex subunit 1 yes no 2 0.015253 45.915 By MS/MS 1 0 0 0 0 1898 886 2025 6022 4281 4281 3202;3724 1 MTVVKRQAQSPS SRHERSLRMTVVKRQA KRQAQSPS________ R M T P S - 1 1 0 0 0 2 0 0 0 0 0 1 1 0 1 2 1 0 0 2 0 0 12 2 1330.7027 F8VWR9 F8VWR9 136 147 PPFIA2 yes yes 2 0.015962 45.908 By MS/MS 1 0 0 0 0 1899 678 2026 6023 4282 4282 906;3129 1 MVEPENAVTITPLRPEDDYSPR QMRVWRERMVEPENAV PEDDYSPRERRGGGLR R M V P R E 1 2 1 2 0 0 3 0 0 1 1 0 1 0 4 1 2 0 1 2 0 0 22 1 2528.2217 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YDF9 A0A0G2JMS7 735 756 SCRIB Protein scribble homolog yes no 3 0.002533 53.865 By MS/MS By matching By MS/MS 2 2 2 10972000 5557400 2115200 3299300 1900 226 2027 6024;6025;6026;6027;6028;6029 4283;4284;4285 4284 21 306;2941;2942 3 MVSQSQPGSR SRGRSRTKMVSQSQPG SQSQPGSRSGSPGRVL K M V S R S 0 1 0 0 0 2 0 1 0 0 0 0 1 0 1 3 0 0 0 1 0 0 10 0 1075.508 E3W994;J3KR49;E7ERI8;E7EW49;O75122 E3W994 451 460 CLASP2 CLIP-associating protein 2 yes no 2 0.005189 67.385 By matching By MS/MS By matching 1 1 1 1600100 678380 681360 240380 1901 501 2028 6030;6031;6032 4286 4286 642 1 MVVESAYEVIK ENWKEVHKMVVESAYE ESAYEVIKLKGYTNWA K M V I K L 1 0 0 0 0 0 2 0 0 1 0 1 1 0 0 1 0 0 1 3 0 0 11 0 1266.653 P07195 P07195 234 244 LDHB L-lactate dehydrogenase B chain yes yes 2 0.017094 58.433 By MS/MS 1 574420 0 574420 0 1902 1115 2029 6033 4287 4287 1 MYLGYEYVTAIR VPPRMDAKMYLGYEYV YEYVTAIRNLREGTCP K M Y I R N 1 1 0 0 0 0 1 1 0 1 1 0 1 0 0 0 1 0 3 1 0 0 12 0 1477.7275 P02787 P02787 332 343 TF Serotransferrin yes yes 2 0.01375 78.655 By MS/MS By MS/MS By MS/MS 2 2 2 14232000 6264100 3970000 3997600 1903 1097 2030;2031 6034;6035;6036;6037;6038;6039 4288;4289;4290;4291 4289 4 NAASFPLRSPQPVCSPAGSEGTPK DGDSSTMRNAASFPLR AGSEGTPKGSRPPLIL R N A P K G 3 1 1 0 1 1 1 2 0 0 1 1 0 1 5 4 1 0 0 1 0 0 24 1 2454.1962 Q6KC79 Q6KC79 266 289 NIPBL Nipped-B-like protein yes yes 3 3.6405E-05 75.057 By MS/MS 1 1341100 1341100 0 0 1904 1539 2032 6040 4292 4292 2094 1 NAEAVLQSPGLSGK VLTVDYTRNAEAVLQS QSPGLSGKVKRDAEKK R N A G K V 2 0 1 0 0 1 1 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 14 0 1369.7201 Q13045 Q13045 849 862 FLII Protein flightless-1 homolog yes yes 2 3.2175E-08 107.74 By MS/MS By MS/MS By MS/MS 1 1 1 6953800 2496100 2369000 2088700 1905 1375 2033 6041;6042;6043 4293;4294;4295 4294 1815 3 NAEDCLYELPENIR EEQKVKPKNAEDCLYE YELPENIRVSSAKKTE K N A I R V 1 1 2 1 1 0 3 0 0 1 2 0 0 0 1 0 0 0 1 0 0 0 14 0 1734.7883 Q9NZ63 Q9NZ63 141 154 C9orf78 Uncharacterized protein C9orf78 yes yes 2;3 0.0071126 57.175 By MS/MS By matching By matching 2 2 2 8436900 2927000 2834100 2675800 1906 1882 2034 6044;6045;6046;6047;6048;6049 4296;4297 4296 3923 2 NAFACFDEEATGTIQEDYLR TDPEDVIRNAFACFDE TIQEDYLRELLTTMGD R N A L R E 3 1 1 2 1 1 3 1 0 1 1 0 0 2 0 0 2 0 1 0 0 0 20 0 2349.0219 J3QRS3;P19105;O14950 J3QRS3 110 129 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 2;3 1.5652E-08 84.581 By MS/MS By MS/MS By MS/MS 2 2 2 20034000 14847000 2046100 3141500 1907 923 2035 6050;6051;6052;6053;6054;6055 4298;4299;4300;4301 4299 4 NAGSRSSSRENR DPQSRSLKNAGSRSSS RSSSRENRATSGEGAQ K N A N R A 1 3 2 0 0 0 1 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 12 2 1319.629 O43247 O43247 95 106 TEX33 Testis-expressed sequence 33 protein yes yes 2 0.010518 52.891 By MS/MS 1 1145500 1145500 0 0 1908 1003 2036 6056 4302 4302 1335;1336 1 NAHSATTWSGQYVGGAEAR VAWKNNYRNAHSATTW YVGGAEARINTQWLLT R N A A R I 4 1 1 0 0 1 1 3 1 0 0 0 0 0 0 2 2 1 1 1 0 0 19 0 1961.898 CON__Streptavidin CON__Streptavidin 86 104 yes yes 3 2.5513E-50 136.33 By MS/MS By MS/MS By MS/MS 1 1 1 68823000 37808000 13944000 17071000 + 1909 475 2037 6057;6058;6059 4303;4304;4305 4304 3 NALFCLESAWK TVTHPVVRNALFCLES FCLESAWKTAQEGDHG R N A W K T 2 0 1 0 1 0 1 0 0 0 2 1 0 1 0 1 0 1 0 0 0 0 11 0 1337.6438 P01023 P01023 1123 1133 A2M Alpha-2-macroglobulin yes yes 2 0.0054173 72.325 By matching By matching By MS/MS 1 1 1 1301700 575770 265510 460450 1910 1086 2038 6060;6061;6062 4306 4306 1 NALPPVLTTVNGQSPPEHSAPAK PKVNPWTKNALPPVLT PEHSAPAKVVRAAVPK K N A A K V 3 0 2 0 0 1 1 1 1 0 2 1 0 0 5 2 2 0 0 2 0 0 23 0 2324.2125 A0A0B4J210;Q6PKG0;H0YBM7 A0A0B4J210 130 152 LARP1 La-related protein 1 yes no 3 0.001118 54.225 By matching By MS/MS By MS/MS 1 1 1 11036000 4807000 3786900 2442400 1911 177 2039 6063;6064;6065 4307;4308 4308 243 2 NAPAAVDEGSISPR NRRQARGRNAPAAVDE DEGSISPRTLSAIKRA R N A P R T 3 1 1 1 0 0 1 1 0 1 0 0 0 0 2 2 0 0 0 1 0 0 14 0 1382.679 R4GMW8;P28715 R4GMW8 799 812 BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells yes no 2 0.0064487 56.872 By matching By matching By MS/MS 1 1 1 8221600 3028800 2869800 2323000 1912 1201 2040 6066;6067;6068 4309 4309 1551 1 NASTFEDVTQVSSAYQK VQKDRMDKNASTFEDV QVSSAYQKTVPVEAVT K N A Q K T 2 0 1 1 0 2 1 0 0 0 0 1 0 1 0 3 2 0 1 2 0 0 17 0 1873.8694 Q14247 Q14247 320 336 CTTN Src substrate cortactin yes yes 3 0.00065022 67.994 By MS/MS By MS/MS By matching 1 1 1 4235500 1525000 1466000 1244500 1913 1408 2041 6069;6070;6071 4310;4311 4311 3841 2 NATDLQNSSMSEEELTK ETLSGLAKNATDLQNS MSEEELTKAMEGLGMD K N A T K A 1 0 2 1 0 1 3 0 0 0 2 1 1 0 0 3 2 0 0 0 0 0 17 0 1895.8419 Q5QNY5;H0YJ60;P40855 Q5QNY5 119 135 PEX19 Peroxisomal biogenesis factor 19 yes no 2 0.0003991 82.707 By MS/MS By MS/MS By MS/MS 2 2 2 13723000 4850000 6311400 2561500 1914 797 2042;2043 6072;6073;6074;6075;6076;6077 4312;4313;4314;4315 4315 58 1085;1086;1087 4 NATLAWDSSHSSIQNSPK PHIKIEMKNATLAWDS SSIQNSPKLTPKMKKD K N A P K L 2 0 2 1 0 1 0 0 1 1 1 1 0 0 1 5 1 1 0 0 0 0 18 0 1941.9181 O15440 O15440 494 511 ABCC5 Multidrug resistance-associated protein 5 yes yes 3 0.012239 41.482 By MS/MS By matching By matching 1 1 1 1848700 709560 520530 618650 1915 997 2044 6078;6079;6080 4316 4316 1328;1329 1 NAVALSASPQLK LALANSSRNAVALSAS LSASPQLKEAQSEKEE R N A L K E 3 0 1 0 0 1 0 0 0 0 2 1 0 0 1 2 0 0 0 1 0 0 12 0 1197.6717 Q92547 Q92547 881 892 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 0.00034606 91.914 By matching By MS/MS By MS/MS 1 1 1 4183900 1619600 1511600 1052800 1916 1696 2045 6081;6082;6083 4317;4318 4317 2326;2327 2 NAVTQFVSSMSASADVLALAK VGVAYAAKNAVTQFVS ADVLALAKIEIKLSDI K N A A K I 5 0 1 1 0 1 0 0 0 0 2 1 1 1 0 4 1 0 0 3 0 0 21 0 2109.0776 P47985;P0C7P4 P47985 131 151 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 yes no 3 0.0043343 47.499 By MS/MS By matching 1 1 1961900 1155800 0 806160 1917 1134 2046 6084;6085 4319 4319 99 1 NCPPSPLPLISK STNRQIQKNCPPSPLP SPLPLISKQSPQTSFP K N C S K Q 0 0 1 0 1 0 0 0 0 1 2 1 0 0 4 2 0 0 0 0 0 0 12 0 1321.7064 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 479 490 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.00036041 94.191 By MS/MS By MS/MS By MS/MS 1 2 2 4366200 1440500 1621500 1304100 1918 139 2047 6086;6087;6088;6089;6090 4320;4321;4322;4323 4322 188 4 NDAPTPGTSTTPGLR KSNTPTPRNDAPTPGT TSTTPGLRSMPGKPPG R N D L R S 1 1 1 1 0 0 0 2 0 0 1 0 0 0 3 1 4 0 0 0 0 0 15 0 1483.7267 H0YKH0;H0YLW9;H0YLI3;F5H7D6;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726;A0A0D9SES8 H0YKH0 324 338 TLE3 Transducin-like enhancer protein 3 yes no 2 1.9663E-06 96.067 By MS/MS By MS/MS By MS/MS 2 2 2 9751700 3563000 3409000 2779800 1919 659 2048 6091;6092;6093;6094;6095;6096 4324;4325;4326;4327;4328 4325 3121;3122;3123 5 NDEELNKLLGK RHLQLAIRNDEELNKL ELNKLLGKVTIAQGGV R N D G K V 0 0 2 1 0 0 2 1 0 0 3 2 0 0 0 0 0 0 0 0 0 0 11 1 1271.6721 A0A0U1RR32;A0A0U1RRH7;Q99878;Q96KK5;Q9BTM1;Q16777;Q6FI13;P20671;P0C0S8;H0YFX9 A0A0U1RR32 90 100 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST2H2AA3;HIST1H2AD;HIST1H2AG Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A yes no 2 0.0070194 82.831 By matching By MS/MS By matching 1 1 1 1627500 660440 686550 280480 1920 258 2049 6097;6098;6099 4329 4329 1 NDFQLIGIQDGYLSLLQDSGEVR MDVPNIKRNDFQLIGI LQDSGEVREDLRLPEG R N D V R E 0 1 1 3 0 3 1 3 0 2 4 0 0 1 0 2 0 0 1 1 0 0 23 0 2579.2867 I3L397;I3L504;P63241 I3L397 87 109 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 2;3 2.3656E-33 118.47 By MS/MS By MS/MS By MS/MS 2 2 2 48655000 16073000 15177000 17406000 1921 889 2050 6100;6101;6102;6103;6104;6105 4330;4331;4332;4333;4334;4335 4330 6 NDKSEEEQSSSSVK SKQAVEMKNDKSEEEQ EQSSSSVKKDETNVKM K N D V K K 0 0 1 1 0 1 3 0 0 0 0 2 0 0 0 5 0 0 0 1 0 0 14 1 1552.6853 G3V4W0;B4DY08;B2R5W2;G3V4C1;G3V2Q1;P07910;G3V5V7;G3V2D6 G3V4W0 217 230 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2 2.8634E-14 131.61 By MS/MS By MS/MS By matching 1 1 1 16413000 8362000 7706700 344730 1922 335 2051 6106;6107;6108 4336;4337 4337 463 2 NDLAVVDVR GISDVFAKNDLAVVDV DLAVVDVRIGMTRKFG K N D V R I 1 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 3 0 0 9 0 999.53491 P19338 P19338 334 342 NCL Nucleolin yes yes 2 0.0056922 94.692 By MS/MS By matching By matching 1 1 1 2321700 505680 1542200 273800 1923 1175 2052 6109;6110;6111 4338 4338 1 NDLQDTEISPR EAWEASHKNDLQDTEI QDTEISPRQNRRTRAA K N D P R Q 0 1 1 2 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 11 0 1286.6103 Q9NS91 Q9NS91 463 473 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 2 1.4605E-15 145.52 By MS/MS By MS/MS By MS/MS 1 1 1 16241000 5800200 5878100 4563200 1924 1855 2053 6112;6113;6114 4339;4340;4341 4340 2616 3 NDSVIVADQTPTPTR TLKFGPARNDSVIVAD DQTPTPTRFLKNCEEV R N D T R F 1 1 1 2 0 1 0 0 0 1 0 0 0 0 2 1 3 0 0 2 0 0 15 0 1612.8057 B8ZZU6;E9PBF9;P15336;E9PEK8;H7C2N6 B8ZZU6 42 56 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes no 2 6.0971E-85 166.92 By matching By MS/MS By MS/MS 1 2 2 8353800 868750 4206700 3278300 1925 387 2054;2055 6115;6116;6117;6118;6119 4342;4343;4344 4343 3010;3011;3012 3 NEDSLVFVQTDK KRTTVMVKNEDSLVFV LVFVQTDKSIYKPGQT K N E D K S 0 0 1 2 0 1 1 0 0 0 1 1 0 1 0 1 1 0 0 2 0 0 12 0 1393.6725 P01023;F8W7L3 P01023 124 135 A2M Alpha-2-macroglobulin yes no 2 0.0076658 69.979 By MS/MS By matching 1 1 479470 261380 0 218090 1926 1086 2056 6120;6121 4345 4345 1 NEEENIYSVPHDSTQGK MDAVVKPRNEEENIYS PHDSTQGKIITIRNIN R N E G K I 0 0 2 1 0 1 3 1 1 1 0 1 0 0 1 2 1 0 1 1 0 0 17 0 1945.8654 Q9NRY4 Q9NRY4 1099 1115 ARHGAP35 Rho GTPase-activating protein 35 yes yes 2;3 4.8171E-69 154.67 By MS/MS By MS/MS By MS/MS 2 2 2 27973000 9700300 10753000 7520300 1927 1854 2057 6122;6123;6124;6125;6126;6127 4346;4347;4348;4349;4350;4351 4349 2613;3914 6 NEEPSEEEIDAPKPK SKTKKVTKNEEPSEEE EIDAPKPKKMKKEKEM K N E P K K 1 0 1 1 0 0 5 0 0 1 0 2 0 0 3 1 0 0 0 0 0 0 15 1 1710.7948 Q9NR30 Q9NR30 117 131 DDX21 Nucleolar RNA helicase 2 yes yes 2;3 6.4021E-46 150.26 By MS/MS By MS/MS By MS/MS 2 2 2 61079000 17226000 25188000 18665000 1928 1850 2058 6128;6129;6130;6131;6132;6133 4352;4353;4354;4355;4356;4357;4358 4358 2603 6 NEIIQSPISQVPSVEK NETGDITRNEIIQSPI SQVPSVEKLSMNTGNE R N E E K L 0 0 1 0 0 2 2 0 0 3 0 1 0 0 2 3 0 0 0 2 0 0 16 0 1766.9414 Q7Z3T8 Q7Z3T8 934 949 ZFYVE16 Zinc finger FYVE domain-containing protein 16 yes yes 2 0.0019758 61.265 By matching By matching By MS/MS 1 1 1 3174600 1062100 1078600 1033900 1929 1578 2059 6134;6135;6136 4359 4359 2147 1 NEVNGTSEDIKSEGDTQSN ESKESDTKNEVNGTSE SEGDTQSN________ K N E S N - 0 0 3 2 0 1 3 2 0 1 0 1 0 0 0 3 2 0 0 1 0 0 19 1 2022.8614 O95232 O95232 414 432 LUC7L3 Luc7-like protein 3 yes yes 2 0.0042624 62.658 By matching By MS/MS By MS/MS 1 1 2 3070300 700430 1339800 1030100 1930 1061 2060 6137;6138;6139;6140 4360;4361 4361 1424 2 NFDFEGSLSPVIAPK TDRLAWTRNFDFEGSL LSPVIAPKKARPSETG R N F P K K 1 0 1 1 0 0 1 1 0 1 1 1 0 2 2 2 0 0 0 1 0 0 15 0 1619.8195 Q9H1A4;H0Y564 Q9H1A4 680 694 ANAPC1 Anaphase-promoting complex subunit 1 yes no 2 0.00025395 82.578 By MS/MS By MS/MS By MS/MS 1 1 1 7427800 3132600 1950600 2344600 1931 1811 2061 6141;6142;6143 4362;4363;4364 4363 2529;2530 3 NFDTGLQEYK QQRQLYKRNFDTGLQE DTGLQEYKSLQSELDE R N F Y K S 0 0 1 1 0 1 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 0 10 0 1213.5615 A0A0G2JMZ8;Q16625 A0A0G2JMZ8 435 444 OCLN Occludin yes no 2 0.013534 42.287 By matching By matching By MS/MS 1 1 1 675200 121910 274180 279110 1932 228 2062 6144;6145;6146 4365 4365 3602 1 NFIGNSNHGSQSPR DAYFTEIRNFIGNSNH NHGSQSPRNVEERMNG R N F P R N 0 1 3 0 0 1 0 2 1 1 0 0 0 1 1 3 0 0 0 0 0 0 14 0 1513.7022 E7EUL6;A0A0C3SFZ7;E7EQ57;Q03112 E7EUL6 840 853 MECOM MDS1 and EVI1 complex locus protein EVI1 yes no 2 0.0012908 75.911 By matching By matching By MS/MS 1 1 1 4864900 2121900 1641200 1101800 1933 179 2063 6147;6148;6149 4366 4366 247 1 NFILDQTNVSAAAQR EIAARKKRNFILDQTN NVSAAAQRRKMCLFAG R N F Q R R 3 1 2 1 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 15 0 1646.8376 Q00839 Q00839 576 590 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 2 3.6999E-11 105.65 By MS/MS 1 1200300 0 1200300 0 1934 1327 2064 6150 4367 4367 1 NFLETDNEGNGILRR NRWSDLSKNFLETDNE EGNGILRRRDIKNALY K N F R R R 0 2 3 1 0 0 2 2 0 1 2 0 0 1 0 0 1 0 0 0 0 0 15 1 1746.8649 Q5THR3 Q5THR3 855 869 EFCAB6 EF-hand calcium-binding domain-containing protein 6 yes yes 2 0.0048002 47.559 By MS/MS By matching 1 1 524860 226800 298060 0 1935 1514 2065 6151;6152 4368 4368 94;95 3419 1 NFSDNQLQEGK KKSKENPRNFSDNQLQ DNQLQEGKNVIGLQMG R N F G K N 0 0 2 1 0 2 1 1 0 0 1 1 0 1 0 1 0 0 0 0 0 0 11 0 1278.584 X6RJP6;P37802 X6RJP6 161 171 TAGLN2 Transgelin-2 yes no 2 0.00081384 90.793 By MS/MS By MS/MS 1 1 2463600 1281000 1182600 0 1936 1226 2066 6153;6154 4369;4370 4369 1586 2 NFTKPQDGDVIAPLITPQKK FVQWCADRNFTKPQDG PLITPQKKEWNDSTSV R N F K K E 1 0 1 2 0 2 0 1 0 2 1 3 0 1 3 0 2 0 0 1 0 0 20 2 2209.2107 Q9Y3Z3 Q9Y3Z3 577 596 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes yes 3 0.0038516 64.705 By MS/MS By matching By matching 1 1 1 9116600 4010400 2321800 2784400 1937 1967 2067 6155;6156;6157 4371 4371 3557 1 NFYESDDDQKEK DELEDNGKNFYESDDD SDDDQKEKTDKKKKPY K N F E K T 0 0 1 3 0 1 2 0 0 0 0 2 0 1 0 1 0 0 1 0 0 0 12 1 1516.6318 O00203 O00203 272 283 AP3B1 AP-3 complex subunit beta-1 yes yes 2 0.0061702 71.558 By MS/MS By matching 1 1 2667700 1379700 1288100 0 1938 970 2068 6158;6159 4372 4372 1281 1 NGDECAYHHPISPCK CKYWPACKNGDECAYH HHPISPCKAFPNCKFA K N G C K A 1 0 1 1 2 0 1 1 2 1 0 1 0 0 2 1 0 0 1 0 0 0 15 0 1783.7406 G3V411;H0YJA2;Q6PJT7;H0YJ51;G3V5I6;G3V256 G3V411 311 325 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 3 0.015131 42.226 By matching By MS/MS By matching 1 1 1 5766000 2227000 1822300 1716700 1939 719 2069 6160;6161;6162 4373 4373 971 0 NGPSSSPFSSPASSR GISQLWKRNGPSSSPF FSSPASSRSQTPERPA R N G S R S 1 1 1 0 0 0 0 1 0 0 0 0 0 1 3 7 0 0 0 0 0 0 15 0 1463.6641 A0A087WY75;A0A075B7F8;A8CG34;C9JFL1;A6NF01;Q96HA1 A0A087WY75 165 179 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 yes no 2 0.0062086 54.393 By matching By matching By MS/MS 1 1 1 4447800 1405100 1768900 1273900 1940 17 2070 6163;6164;6165 4374 4374 17 1 NGSEADIDEGLYSR VPTNGMAKNGSEADID IDEGLYSRQLYVLGHE K N G S R Q 1 1 1 2 0 0 2 2 0 1 1 0 0 0 0 2 0 0 1 0 0 0 14 0 1524.6692 Q5JRR9;Q5JRS0;P22314;Q5JRS1;Q5JRS3;Q5JRS2 Q5JRR9 44 57 UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 2 4.4315E-08 107.09 By MS/MS By MS/MS By MS/MS 3 3 3 26145000 8273800 10100000 7770800 1941 1186 2071;2072 6166;6167;6168;6169;6170;6171;6172;6173;6174 4375;4376;4377;4378;4379;4380 4375 70 1536;3773 5 NGSLTNHFSFEK QINGSVLKNGSLTNHF TNHFSFEKKKARVAVL K N G E K K 0 0 2 0 0 0 1 1 1 0 1 1 0 2 0 2 1 0 0 0 0 0 12 0 1379.647 A0A140TA71;P22102 A0A140TA71 58 69 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 2 0.0048228 69.229 By MS/MS By matching By matching 1 1 1 4102500 1341000 1625800 1135700 1942 267 2073 6175;6176;6177 4381 4381 350 1 NGSTAVAESVASPQK KPATGERKNGSTAVAE ESVASPQKTMSVLSCI K N G Q K T 3 0 1 0 0 1 1 1 0 0 0 1 0 0 1 3 1 0 0 2 0 0 15 0 1444.7158 Q12888;A6NNK5;C9JXV0 Q12888 1017 1031 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 3.9576E-07 90.706 By MS/MS By matching By MS/MS 1 1 1 4103300 1394200 1633700 1075400 1943 1367 2074 6178;6179;6180 4382;4383 4382 1803 2 NGTLILSPVDIK IGQVGKFKNGTLILSP ILSPVDIKKINSSRVA K N G I K K 0 0 1 1 0 0 0 1 0 2 2 1 0 0 1 1 1 0 0 1 0 0 12 0 1268.734 Q5TBI2;Q8NDD1 Q5TBI2 236 247 C1orf131 Uncharacterized protein C1orf131 yes no 2 0.017508 50.897 By MS/MS By matching By matching 1 1 1 786420 298060 182690 305660 1944 1511 2075 6181;6182;6183 4384 4384 2043 1 NGVAAEVSPAKEENPR DYFGPPAKNGVAAEVS PAKEENPRRASKAVEE K N G P R R 3 1 2 0 0 0 3 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 16 1 1666.8275 Q9BW71 Q9BW71 118 133 HIRIP3 HIRA-interacting protein 3 yes yes 2;3 0.0016077 65.022 By matching By MS/MS By MS/MS 3 3 3 16610000 6260300 5861600 4487600 1945 1787 2076;2077 6184;6185;6186;6187;6188;6189;6190;6191;6192 4385;4386;4387 4387 2478 3 NHLSPQQGGATPQVPSPCCR RRGLAHPKNHLSPQQG QVPSPCCRFDSPRGPP K N H C R F 1 1 1 0 2 3 0 2 1 0 1 0 0 0 4 2 1 0 0 1 0 0 20 0 2190.0059 A0A087X0R7;Q9H4L4 A0A087X0R7 96 115 SENP3-EIF4A1;SENP3 Sentrin-specific protease 3 yes no 3 1.117E-10 73.809 By MS/MS By MS/MS By MS/MS 1 3 3 7451400 1796500 2971300 2683600 1946 99 2078;2079 6193;6194;6195;6196;6197;6198;6199 4388;4389;4390 4389 123;124 2 NHSDSSTSESEVSSVSPLK NLQQNEEKNHSDSSTS VSSVSPLKNKHPDEDA K N H L K N 0 0 1 1 0 0 2 0 1 0 1 1 0 0 1 8 1 0 0 2 0 0 19 0 1975.8971 H7C559;C9IZ04;Q9NY27 H7C559 43 61 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 3 2.4834E-08 86.179 By matching By MS/MS By MS/MS 1 1 1 5469600 1074100 2799700 1595800 1947 395 2080 6200;6201;6202 4391;4392 4391 528 2 NHSGSRTPPVALNSSR SATPPATRNHSGSRTP PVALNSSRMSCFSRPS R N H S R M 1 2 2 0 0 0 0 1 1 0 1 0 0 0 2 4 1 0 0 1 0 0 16 1 1678.8499 Q9UQ35 Q9UQ35 2098 2113 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0060618 53.403 By MS/MS By matching By matching 1 1 1 6269300 2335000 2455400 1478900 1948 1945 2081 6203;6204;6205 4393 4393 2758;2759;3540 1 NIELICQENEGENDPVLQR DFYFGKLRNIELICQE ENDPVLQRIVDILYAT R N I Q R I 0 1 3 1 1 2 4 1 0 2 2 0 0 0 1 0 0 0 0 1 0 0 19 0 2269.0645 Q15691 Q15691 223 241 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes yes 3 3.2603E-17 73.76 By MS/MS By matching By matching 1 1 1 2917200 1472900 639670 804560 1949 1449 2082 6206;6207;6208 4394 4394 1 NIIHGSDSVESAEK DFCIQVGRNIIHGSDS DSVESAEKEIGLWFHP R N I E K E 1 0 1 1 0 0 2 1 1 2 0 1 0 0 0 3 0 0 0 1 0 0 14 0 1484.7107 P15531 P15531 115 128 NME1 Nucleoside diphosphate kinase A yes yes 2;3 7.3459E-09 108.71 By MS/MS By MS/MS By MS/MS 2 2 2 20137000 6542000 7927100 5668500 1950 1160 2083 6209;6210;6211;6212;6213;6214 4395;4396;4397;4398 4397 4 NIILEEGKEILVGDVGQTVDDPYATFVK FCLSEDKKNIILEEGK DPYATFVKMLPDKDCR K N I V K M 1 0 1 3 0 1 3 3 0 3 2 2 0 1 1 0 2 0 1 4 0 0 28 1 3061.5859 E9PP50;P23528;E9PQB7;G3V1A4;E9PK25;E9PLJ3;E9PS23 E9PP50 46 73 CFL1 Cofilin-1 yes no 3 1.9468E-10 68.771 By MS/MS By MS/MS By MS/MS 1 1 1 13101000 4538500 3125200 5437500 1951 613 2084 6215;6216;6217 4399;4400;4401 4400 3 NILSQIVDIDGIWEGTR VEMPGCKKNILSQIVD DGIWEGTRDFAACNHL K N I T R D 0 1 1 2 0 1 1 2 0 4 1 0 0 0 0 1 1 1 0 1 0 0 17 0 1928.0003 P16233 P16233 257 273 PNLIP Pancreatic triacylglycerol lipase yes yes 2;3 2.2184E-131 177.38 By MS/MS By MS/MS By MS/MS 2 2 2 76603000 37885000 17501000 21217000 1952 1162 2085 6218;6219;6220;6221;6222;6223 4402;4403;4404;4405 4403 4 NIPKYDLLYQDI VQSPIDPKNIPKYDLL YDLLYQDI________ K N I D I - 0 0 1 2 0 1 0 0 0 2 2 1 0 0 1 0 0 0 2 0 0 0 12 1 1493.7766 Q9NX01 Q9NX01 138 149 TXNL4B Thioredoxin-like protein 4B yes yes 2 0.013748 53.756 By MS/MS 1 360840 360840 0 0 1953 1872 2086 6224 4406 4406 3921 1 NIPTVNENLENYYLEVNQLEK DLSYNKLKNIPTVNEN LEVNQLEKFDIKSFCK K N I E K F 0 0 5 0 0 1 4 0 0 1 3 1 0 0 1 0 1 0 2 2 0 0 21 0 2535.2493 P51884 P51884 268 288 LUM Lumican yes yes 2;3 7.4854E-32 88.945 By MS/MS By matching By MS/MS 2 2 2 110110000 52799000 25998000 31317000 1954 1280 2087 6225;6226;6227;6228;6229;6230 4407;4408;4409 4408 3 NIYVLQELDNPGAK DKNSVNFKNIYVLQEL ELDNPGAKRILELDQF K N I A K R 1 0 2 1 0 1 1 1 0 1 2 1 0 0 1 0 0 0 1 1 0 0 14 0 1572.8148 B1AHC9;P12956 B1AHC9 51 64 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.00034824 83.397 By MS/MS By MS/MS By MS/MS 1 1 1 1110800 516160 273200 321480 1955 324 2088 6231;6232;6233 4410;4411;4412 4411 3 NKKSPEIHR GTEQEAAKNKKSPEIH KKSPEIHRRIDISPST K N K H R R 0 1 1 0 0 0 1 0 1 1 0 2 0 0 1 1 0 0 0 0 0 0 9 2 1107.6149 Q9Y2W1 Q9Y2W1 669 677 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.01782 49.632 By MS/MS 1 0 0 0 0 1956 1960 2089 6234 4413 4413 2803 1 NKPGPNIESGNEDDDASFK KGQKKNQKNKPGPNIE EDDDASFKIKTVAQKK K N K F K I 1 0 3 3 0 0 2 2 0 1 0 2 0 1 2 2 0 0 0 0 0 0 19 1 2032.8974 A0A087WUT6;O60841 A0A087WUT6 206 224 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0076181 49.662 By matching By matching By MS/MS 1 1 1 133590000 55508000 37568000 40519000 1957 41 2090 6235;6236;6237 4414 4414 51 1 NKPGPNIESGNEDDDASFKIK KGQKKNQKNKPGPNIE DDASFKIKTVAQKKAE K N K I K T 1 0 3 3 0 0 2 2 0 2 0 3 0 1 2 2 0 0 0 0 0 0 21 2 2274.0764 A0A087WUT6;O60841 A0A087WUT6 206 226 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0010509 75.524 By MS/MS By MS/MS By matching 1 1 1 71654000 30292000 22817000 18545000 1958 41 2091 6238;6239;6240 4415;4416 4415 51 2 NKSNESVDIQDQEEK KKRSGKWKNKSNESVD DIQDQEEKVVKQECIK K N K E K V 0 0 2 2 0 2 3 0 0 1 0 2 0 0 0 2 0 0 0 1 0 0 15 1 1761.8017 Q5UIP0 Q5UIP0 1574 1588 RIF1 Telomere-associated protein RIF1 yes yes 2 0.0085314 56.599 By MS/MS By matching By matching 1 1 1 4458800 1852200 1648100 958580 1959 1516 2092 6241;6242;6243 4417 4417 2047;2048 1 NKTSTTSSMVASAEQPR RPIKGILKNKTSTTSS VASAEQPRGNVDEELS K N K P R G 2 1 1 0 0 1 1 0 0 0 0 1 1 0 1 4 3 0 0 1 0 0 17 1 1793.8578 E7EMN6;G1AUC5;Q6NXS1;P41236;E7EUI7 E7EMN6 17 33 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 yes no 3 0.016494 43.454 By matching By matching By MS/MS 1 1 1 2204300 714480 851480 638310 1960 520 2093 6244;6245;6246 4418 4418 660;661;662;3050;3051 1 NLALDEAGQRSTM SEVAARKRNLALDEAG EAGQRSTM________ R N L T M - 2 1 1 1 0 1 1 1 0 0 2 0 1 0 0 1 1 0 0 0 0 0 13 1 1404.6667 Q53TN4 Q53TN4 274 286 CYBRD1 Cytochrome b reductase 1 yes yes 2 0.0056026 71.241 By MS/MS By MS/MS By matching 1 1 1 1682500 549020 534200 599320 1961 1481 2094 6247;6248;6249 4419;4420 4420 1989;3403 2 NLASPNCVKPK PVVRPKIRNLASPNCV SPNCVKPKIFFDTDDD R N L P K I 1 0 2 0 1 0 0 0 0 0 1 2 0 0 2 1 0 0 0 1 0 0 11 1 1226.6441 Q8NG27 Q8NG27 262 272 PJA1 E3 ubiquitin-protein ligase Praja-1 yes yes 2 0.0026837 86.699 By matching By MS/MS By MS/MS 1 1 1 9376600 3235000 3444900 2696700 1962 1662 2095 6250;6251;6252 4421;4422 4421 2280 2 NLEAGVMKEMSNSKELTLR IVAKRTTKNLEAGVMK NSKELTLRIHSKNFHE K N L L R I 1 1 2 0 0 0 3 1 0 0 3 2 2 0 0 2 1 0 0 1 0 0 19 2 2149.0871 P35368 P35368 236 254 ADRA1B Alpha-1B adrenergic receptor yes yes 3 0.015969 44.391 By MS/MS 1 0 0 0 0 1963 1219 2096 6253 4423 4423 3313 1 NLEQILNGGESPK PNGSVETKNLEQILNG LNGGESPKQKGQEIKR K N L P K Q 0 0 2 0 0 1 2 2 0 1 2 1 0 0 1 1 0 0 0 0 0 0 13 0 1397.7151 G3V340;Q13033;G3V3G7 G3V340 219 231 STRN3 Striatin-3 yes no 2 6.2898E-05 91.313 By MS/MS By MS/MS By MS/MS 1 1 2 2369100 617210 552910 1199000 1964 716 2097 6254;6255;6256;6257 4424;4425;4426 4425 965 3 NLEQILNGGESPKQK PNGSVETKNLEQILNG GGESPKQKGQEIKRSS K N L Q K G 0 0 2 0 0 2 2 2 0 1 2 2 0 0 1 1 0 0 0 0 0 0 15 1 1653.8686 G3V340;Q13033 G3V340 219 233 STRN3 Striatin-3 yes no 2 0.0086672 52.823 By matching By MS/MS By matching 2 2 2 3225800 1096300 1124400 1005100 1965 716 2098 6258;6259;6260;6261;6262;6263 4427;4428 4427 36 965 1 NLESLLATNR SNERHTVKNLESLLAT ESLLATNRDKEFHSHL K N L N R D 1 1 2 0 0 0 1 0 0 0 3 0 0 0 0 1 1 0 0 0 0 0 10 0 1129.6091 Q66GS9 Q66GS9 1032 1041 CEP135 Centrosomal protein of 135 kDa yes yes 2 0.016374 47.823 By matching By MS/MS By matching 1 1 1 1385800 562130 488840 334840 1966 1527 2099 6264;6265;6266 4429 4429 3424 1 NLEWIAGGTWTPSALK SSFKEAVKNLEWIAGG TWTPSALKFAYDRLIK K N L L K F 2 0 1 0 0 0 1 2 0 1 2 1 0 0 1 1 2 2 0 0 0 0 16 0 1742.8992 P12110 P12110 693 708 COL6A2 Collagen alpha-2(VI) chain yes yes 2 1.4085E-18 117.2 By MS/MS By MS/MS By MS/MS 1 1 1 16051000 6057000 5372600 4621300 1967 1150 2100 6267;6268;6269 4430;4431;4432;4433 4430 4 NLGSGSPKPR EEVPAFFKNLGSGSPK GSGSPKPRQKFCGMFC K N L P R Q 0 1 1 0 0 0 0 2 0 0 1 1 0 0 2 2 0 0 0 0 0 0 10 1 1011.5461 A0A1C7CYX9 A0A1C7CYX9 22 31 yes yes 2 0.0065781 77.124 By matching By MS/MS By matching 1 1 1 6007300 2098200 2380700 1528400 1968 290 2101 6270;6271;6272 4434 4434 383 1 NLGSINTELQDVQR YIDSRARRNLGSINTE TELQDVQRIMVANIEE R N L Q R I 0 1 2 1 0 2 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 14 0 1585.806 A0A087X1A9;O75396 A0A087X1A9 9 22 SEC22B Vesicle-trafficking protein SEC22b yes no 2 1.4044E-05 88.561 By MS/MS By MS/MS 1 1 2872900 1678200 1194700 0 1969 103 2102 6273;6274 4435;4436 4435 132 2 NLHALILVNNK DGDFKNLKNLHALILV ALILVNNKISKVSPGA K N L N K I 1 0 3 0 0 0 0 0 1 1 3 1 0 0 0 0 0 0 0 1 0 0 11 0 1247.735 P07585;F8VX58;F8VXZ8;F8VUF6;F8VWU0 P07585 106 116 DCN Decorin yes no 2;3 0.002564 93.143 By MS/MS By MS/MS By matching 2 2 2 3346400 1886900 647530 811990 1970 1119 2103 6275;6276;6277;6278;6279;6280 4437;4438 4437 2 NLKGQEDAILSYEPVTR SDDYYGAKNLKGQEDA LSYEPVTRQEIHYARP K N L T R Q 1 1 1 1 0 1 2 1 0 1 2 1 0 0 1 1 1 0 1 1 0 0 17 1 1931.9953 Q92796 Q92796 605 621 DLG3 Disks large homolog 3 yes yes 3 0.015971 43.798 By MS/MS 1 0 0 0 0 1971 1709 2104 6281 4439 4439 3888 1 NLLEDDSDEEEDFFLR GSVKSERRNLLEDDSD EEEDFFLRGPSGPRFG R N L L R G 0 1 1 4 0 0 4 0 0 0 3 0 0 2 0 1 0 0 0 0 0 0 16 0 1984.8538 O75379 O75379 24 39 VAMP4 Vesicle-associated membrane protein 4 yes yes 2 0.0012205 71.241 By matching By MS/MS 1 1 3726100 0 1700100 2026000 1972 1032 2105 6282;6283 4440 4440 1382 1 NLQASGLTTLGQALR ATFMSELKNLQASGLT TTLGQALRSSFDLLNL K N L L R S 2 1 1 0 0 2 0 2 0 0 4 0 0 0 0 1 2 0 0 0 0 0 15 0 1541.8526 Q5JSJ4 Q5JSJ4 79 93 DDX26B Protein DDX26B yes yes 3 0.0065602 43.813 By matching By MS/MS 1 1 796210 426940 0 369270 1973 1487 2106 6284;6285 4441 4441 91 1 NLQEAEEWYK QYESVAAKNLQEAEEW QEAEEWYKSKFADLSE K N L Y K S 1 0 1 0 0 1 3 0 0 0 1 1 0 0 0 0 0 1 1 0 0 0 10 0 1308.5986 P08670;B0YJC4;B0YJC5;Q5JVS8;H7C5W5;P41219;F8W835 P08670 283 292 VIM;PRPH Vimentin;Peripherin yes no 2 0.0086105 68.735 By matching By MS/MS By matching 1 1 1 2487400 1259300 779940 448200 1974 1129 2107 6286;6287;6288 4442 4442 1 NLQTVNVDEN YVPVTTFKNLQTVNVD QTVNVDEN________ K N L E N - 0 0 3 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 0 10 0 1144.536 P62899 P62899 116 125 RPL31 60S ribosomal protein L31 yes yes 2 0.0027869 85.161 By MS/MS By matching By matching 1 1 1 5863500 2010000 2463800 1389700 1975 1314 2108 6289;6290;6291 4443 4443 1 NLQVALTSK SVLLDKIKNLQVALTS LQVALTSKQQSLETAM K N L S K Q 1 0 1 0 0 1 0 0 0 0 2 1 0 0 0 1 1 0 0 1 0 0 9 0 972.5604 E7ENL6;P12111 E7ENL6 1867 1875 COL6A3 Collagen alpha-3(VI) chain yes no 2 0.013665 76.478 By MS/MS 1 599680 599680 0 0 1976 522 2109 6292 4444 4444 1 NLQYYDISAK SIVFHRKKNLQYYDIS QYYDISAKSNYNFEKP K N L A K S 1 0 1 1 0 1 0 0 0 1 1 1 0 0 0 1 0 0 2 0 0 0 10 0 1213.5979 B4DV51;F5H018;B5MDF5;J3KQE5;P62826 B4DV51 55 64 RAN GTP-binding nuclear protein Ran yes no 2 0.0048602 79.974 By matching By MS/MS By matching 1 1 1 2888800 746760 1844400 297600 1977 351 2110 6293;6294;6295 4445 4445 1 NLSKTELNKIASQLSK SSSSKDEKNLSKTELN KIASQLSKLVTAEISR K N L S K L 1 0 2 0 0 1 1 0 0 1 3 3 0 0 0 3 1 0 0 0 0 0 16 2 1772.9996 J3QTJ6;Q5CZC0;A0A087WUX3 J3QTJ6 6461 6476 FSIP2 Fibrous sheath-interacting protein 2 yes no 2 0.0076429 40.577 By MS/MS By matching By matching 1 1 1 1144700 449860 324320 370490 1978 928 2111 6296;6297;6298 4446 4446 51 1237;1238;3220 1 NLSNEELTK HSPVQMNRNLSNEELT LSNEELTKSKPSAPPN R N L T K S 0 0 2 0 0 0 2 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 9 0 1046.5244 Q0JRZ9 Q0JRZ9 401 409 FCHO2 F-BAR domain only protein 2 yes yes 2 0.0019378 101.39 By matching By MS/MS By matching 1 1 1 11749000 4537300 3907100 3304900 1979 1360 2112 6299;6300;6301 4447 4447 1790 1 NLSPGAVESDVR DISGLRKKNLSPGAVE GAVESDVRGITGVDLF K N L V R G 1 1 1 1 0 0 1 1 0 0 1 0 0 0 1 2 0 0 0 2 0 0 12 0 1242.6204 P53621 P53621 171 182 COPA Coatomer subunit alpha;Xenin;Proxenin yes yes 2 0.0080609 60.157 By matching By matching By MS/MS 1 1 1 3071200 1208500 1066200 796490 1980 1290 2113 6302;6303;6304 4448 4448 1703 1 NLSPSFSR LRLMGGFKNLSPSFSR NLSPSFSRPASTIARP K N L S R P 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 3 0 0 0 0 0 0 8 0 906.45593 H3BNU8;Q1ED39 H3BNU8 64 71 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.012603 81.525 By MS/MS By matching By matching 1 1 1 2931400 770400 1208700 952380 1981 825 2114 6305;6306;6307 4449 4449 1107 1 NLSSDEATNPISR GEREISLKNLSSDEAT EATNPISRVLNGNQQV K N L S R V 1 1 2 1 0 0 1 0 0 1 1 0 0 0 1 3 1 0 0 0 0 0 13 0 1402.6688 Q7Z417 Q7Z417 110 122 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.00010867 95.401 By matching By MS/MS By MS/MS 1 1 1 4364400 1450500 1574600 1339300 1982 1579 2115 6308;6309;6310 4450;4451 4451 2148 2 NLTYSAPLYVDITK MPNEARLRNLTYSAPL PLYVDITKTVIKEGEE R N L T K T 1 0 1 1 0 0 0 0 0 1 2 1 0 0 1 1 2 0 2 1 0 0 14 0 1596.8399 C9J4M6;C9J2Y9;P30876 C9J4M6 42 55 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 2 0.0096019 44.614 By matching By MS/MS By matching 1 1 1 4959400 1622900 1588700 1747700 1983 408 2116 6311;6312;6313 4452 4452 3020;3642 0 NLVSPAYCTQESR SDFITENRNLVSPAYC AYCTQESREEIPGGEA R N L S R E 1 1 1 0 1 1 1 0 0 0 1 0 0 0 1 2 1 0 1 1 0 0 13 0 1523.7038 Q9NUQ3 Q9NUQ3 94 106 TXLNG Gamma-taxilin yes yes 2 0.012034 52.823 By matching By MS/MS By MS/MS 1 1 1 3291400 1228900 1082600 979920 1984 1862 2117 6314;6315;6316 4453;4454 4454 2630 2 NLVWNAGALHYSDEVEIIQGLTR DRYYRCDRNLVWNAGA EIIQGLTRMPGGRDAL R N L T R M 2 1 2 1 0 1 2 2 1 2 3 0 0 0 0 1 1 1 1 2 0 0 23 0 2597.3238 A0A087X0S5;P12109 A0A087X0S5 83 105 COL6A1 Collagen alpha-1(VI) chain yes no 3 4.9294E-85 148.64 By MS/MS By MS/MS By MS/MS 1 1 1 116450000 52064000 28766000 35624000 1985 101 2118 6317;6318;6319 4455;4456;4457 4455 3 NLYAHIQK GHTEVPARNLYAHIQK NLYAHIQKLGQVPPGE R N L Q K L 1 0 1 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 1 0 0 0 8 0 985.53451 H0Y380;H0Y4H1;H0Y7Z9;H0Y6Z7;P10586 H0Y380 691 698 PTPRF Receptor-type tyrosine-protein phosphatase F yes no 2 0.008953 111.65 By MS/MS By MS/MS By MS/MS 1 1 1 10604000 4793300 3306900 2503500 1986 745 2119 6320;6321;6322 4458;4459;4460 4460 3706 3 NLYSGDYYR IADFGMSRNLYSGDYY LYSGDYYRIQGRAVLP R N L Y R I 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 3 0 0 0 9 0 1149.5091 Q16832 Q16832 734 742 DDR2 Discoidin domain-containing receptor 2 yes yes 2 0.0012175 89.355 By matching By MS/MS By MS/MS 1 1 1 2442700 715690 1069100 657920 1987 1459 2120 6323;6324;6325 4461;4462 4461 3853;3854 2 NNEEWTVDSCTECHCQNSVTICK YHNGVQYRNNEEWTVD QNSVTICKKVSCPIMP R N N C K K 0 0 3 1 4 1 3 0 1 1 0 1 0 0 0 2 3 1 0 2 0 0 23 0 2870.1364 P07996 P07996 327 349 THBS1 Thrombospondin-1 yes yes 3 0.015793 26.627 By MS/MS 1 1419800 1419800 0 0 + 1988 1124 2121 6326 4463 4463 1 NNLEVEDEEGSLFVGVDTIHVHK TYRVAVGKNNLEVEDE VDTIHVHKRWNALLLR K N N H K R 0 0 2 2 0 0 4 2 2 1 2 1 0 1 0 1 1 0 0 4 0 0 23 0 2579.2504 Q99895 Q99895 89 111 CTRC Chymotrypsin-C yes yes 4 0.00063617 52.769 By MS/MS By matching By matching 1 1 1 1438400 779490 234640 424270 1989 1769 2122 6327;6328;6329 4464 4464 1 NNPSPPPDSDLER KSRGRGRKNNPSPPPD PPDSDLERVFVWDLDE K N N E R V 0 1 2 2 0 0 1 0 0 0 1 0 0 0 4 2 0 0 0 0 0 0 13 0 1436.6532 E7ESD5;E9PLN6;F2Z2Y1;O95677 E7ESD5 310 322 EYA4 Eyes absent homolog;Eyes absent homolog 4 yes no 2 0.0065518 61.65 By MS/MS By matching By matching 1 1 1 4579300 1525200 1635500 1418600 1990 535 2123 6330;6331;6332 4465 4465 693 1 NNSFTAPSTVGK TLQNHYYRNNSFTAPS TAPSTVGKRNLSPSQE R N N G K R 1 0 2 0 0 0 0 1 0 0 0 1 0 1 1 2 2 0 0 1 0 0 12 0 1221.599 O95453 O95453 555 566 PARN Poly(A)-specific ribonuclease PARN yes yes 2 0.0013106 83.204 By MS/MS By matching By matching 1 1 1 9880700 3629600 3462400 2788700 1991 1069 2124 6333;6334;6335 4466 4466 1437 1 NNTAAETEDDESDGEDRGGGTSGSLR LLGGGSPKNNTAAETE GGTSGSLRRSKRNSDS K N N L R R 2 2 2 4 0 0 4 5 0 0 1 0 0 0 0 3 3 0 0 0 0 0 26 1 2639.0815 Q6KC79 Q6KC79 2661 2686 NIPBL Nipped-B-like protein yes yes 3 0.00037949 58.796 By matching By MS/MS By MS/MS 1 1 1 6375800 2343500 2351000 1681400 1992 1539 2125 6336;6337;6338 4467;4468 4467 3426;3427 2 NNYALNTTATYAEPYRPIQYR RSTLTYQRNNYALNTT PYRPIQYRVQECNYNR R N N Y R V 3 2 3 0 0 1 1 0 0 1 1 0 0 0 2 0 3 0 4 0 0 0 21 1 2518.2241 Q99569;A0A0D9SF60 Q99569 468 488 PKP4 Plakophilin-4 yes no 3 0.0032236 56.424 By MS/MS 1 0 0 0 0 1993 1766 2126 6339 4469 4469 3898;3899 1 NPDDITNEEYGEFYK KTKPIWTRNPDDITNE EEYGEFYKSLTNDWED R N P Y K S 0 0 2 2 0 0 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1832.7741 P07900 P07900 300 314 HSP90AA1 Heat shock protein HSP 90-alpha yes yes 2 0.001707 75.566 By MS/MS 1 1361200 0 0 1361200 1994 1122 2127 6340 4470 4470 1 NPDDITQEEYGEFYK KTKPIWTRNPDDITQE EEYGEFYKSLTNDWED R N P Y K S 0 0 1 2 0 1 3 1 0 1 0 1 0 1 1 0 1 0 2 0 0 0 15 0 1846.7897 P08238 P08238 292 306 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.010481 54.7 By MS/MS 1 1051200 0 0 1051200 1995 1126 2128 6341 4471 4471 1 NPEAALSPTFR DSGHLDLRNPEAALSP AALSPTFRSDSPVPTA R N P F R S 2 1 1 0 0 0 1 0 0 0 1 0 0 1 2 1 1 0 0 0 0 0 11 0 1201.6091 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 37 47 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes no 2 6.7879E-05 108.59 By MS/MS By MS/MS By MS/MS 1 1 1 10763000 4175200 3476200 3112000 1996 347 2129 6342;6343;6344 4472;4473;4474 4472 476 2 NPEDKSPQLSLSPRPASPK LAGSPTPKNPEDKSPQ SPRPASPKAQWPQSED K N P P K A 1 1 1 1 0 1 1 0 0 0 2 2 0 0 5 4 0 0 0 0 0 0 19 2 2047.0698 B9EGQ5;M0QXA7;O95785 B9EGQ5 182 200 WIZ Protein Wiz yes no 3 0.0041022 55.02 By MS/MS By MS/MS By matching 1 1 1 12982000 5332700 4170900 3478600 1997 391 2130 6345;6346;6347 4475;4476 4475 518;519 2 NPSDSAVHSPFTK SLVQYDLKNPSDSAVH AVHSPFTKRQAFTPSS K N P T K R 1 0 1 1 0 0 0 0 1 0 0 1 0 1 2 3 1 0 0 1 0 0 13 0 1385.6575 Q14157;F8W726 Q14157 408 420 UBAP2L Ubiquitin-associated protein 2-like yes no 2 6.668E-21 140.93 By matching By MS/MS By MS/MS 1 1 1 7940000 2408700 3346700 2184600 1998 1405 2131 6348;6349;6350 4477;4478 4477 1860;1861 2 NPSDSAVHSPFTKR SLVQYDLKNPSDSAVH VHSPFTKRQAFTPSST K N P K R Q 1 1 1 1 0 0 0 0 1 0 0 1 0 1 2 3 1 0 0 1 0 0 14 1 1541.7587 Q14157;F8W726 Q14157 408 421 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 0.011484 55.98 By matching By MS/MS By MS/MS 2 2 2 15537000 5977500 5867000 3692600 1999 1405 2132 6351;6352;6353;6354;6355;6356 4479;4480 4479 1860;1861 2 NQDQQRKSNVSR KEENSAFKNQDQQRKS QRKSNVSRSFYHGPSR K N Q S R S 0 2 2 1 0 3 0 0 0 0 0 1 0 0 0 2 0 0 0 1 0 0 12 2 1458.7288 Q3SY61;Q6UVM3 Q3SY61 176 187 KCNT2 Potassium channel subfamily T member 2 yes no 2 0.017853 52.071 By matching By MS/MS By matching 1 1 1 948830 355670 259820 333340 2000 1469 2133 6357;6358;6359 4481 4481 1968 0 NQENFSSVLYKENMR PEMERVKRNQENFSSV VLYKENMRKATPTPVT R N Q M R K 0 1 3 0 0 1 2 0 0 0 1 1 1 1 0 2 0 0 1 1 0 0 15 1 1857.8679 H7C2Z5;H0Y3P5;A0A087X1N7;P20929 H7C2Z5 364 378 NEB Nebulin yes no 2 0.0065651 42.001 By matching By MS/MS By matching 1 1 1 3990000 1628500 1423200 938340 2001 105 2134 6360;6361;6362 4482 4482 9;10 8 1 NQGGYGGSSSSSSYGSGR GQYFAKPRNQGGYGGS SSSYGSGRRF______ R N Q G R R 0 1 1 0 0 1 0 6 0 0 0 0 0 0 0 7 0 0 2 0 0 0 18 0 1693.6928 F8W6I7;P09651;H0YH80 F8W6I7 288 305 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 2 0.0048125 55.864 By MS/MS By MS/MS By matching 1 1 1 1921900 655030 955370 311470 2002 686 2135 6363;6364;6365 4483;4484 4484 915;916 2 NQILNLTTDNANILLQIDNAR YKTIDDLKNQILNLTT LLQIDNARLAADDFRL K N Q A R L 2 1 5 2 0 2 0 0 0 3 4 0 0 0 0 0 2 0 0 0 0 0 21 0 2366.2554 CON__P13645;P13645 CON__P13645 208 228 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 4.5695E-06 69.922 By MS/MS By MS/MS 2 2 9530400 0 5172700 4357700 + 2003 471 2136 6366;6367;6368;6369 4485;4486;4487 4485 3 NQKGQEEVEMPSK NQKRNEKKNQKGQEEV EEVEMPSKEKQQPQKP K N Q S K E 0 0 1 0 0 2 3 1 0 0 0 2 1 0 1 1 0 0 0 1 0 0 13 1 1502.7035 Q14690 Q14690 1443 1455 PDCD11 Protein RRP5 homolog yes yes 2 0.018533 42.336 By MS/MS 1 0 0 0 0 2004 1419 2137 6370 4488 4488 1895 1 NQKNSLSDPNIDR RFIRPSDRNQKNSLSD LSDPNIDRINLVILGK R N Q D R I 0 1 3 2 0 1 0 0 0 1 1 1 0 0 1 2 0 0 0 0 0 0 13 1 1499.7328 Q9NRY4;A2RRE5 Q9NRY4 585 597 ARHGAP35;GRLF1 Rho GTPase-activating protein 35 yes no 2 0.011341 62.377 By matching By MS/MS By matching 1 1 1 4841200 2092200 1620400 1128500 2005 1854 2138 6371;6372;6373 4489 4489 2614;2615 1 NQKPSQVNGAPGSPTEPAGQK KSPKLQKKNQKPSQVN PTEPAGQKQHQKALPK K N Q Q K Q 2 0 2 0 0 3 1 3 0 0 0 2 0 0 4 2 1 0 0 1 0 0 21 1 2091.0345 I3L1L3;Q9BQG0 I3L1L3 1175 1195 MYBBP1A Myb-binding protein 1A yes no 3 1.1175E-24 105.82 By MS/MS By MS/MS By MS/MS 3 4 4 28665000 6362100 13772000 8531300 2006 885 2139;2140 6374;6375;6376;6377;6378;6379;6380;6381;6382;6383;6384 4490;4491;4492;4493;4494;4495 4493 49;125 1190 6 NQSLGQSAPSLTAGLK ASNLVRMRNQSLGQSA PSLTAGLKELSLPRRG R N Q L K E 2 0 1 0 0 2 0 2 0 0 3 1 0 0 1 3 1 0 0 0 0 0 16 0 1570.8315 Q6P0Q8 Q6P0Q8 142 157 MAST2 Microtubule-associated serine/threonine-protein kinase 2 yes yes 2 0.0019565 66.965 By MS/MS By MS/MS 1 1 768780 0 348900 419880 2007 1544 2141 6385;6386 4496;4497 4497 2101;2102 2 NQSPVLEPVGR ATYSALNRNQSPVLEP PVLEPVGRSTLAQRRG R N Q G R S 0 1 1 0 0 1 1 1 0 0 1 0 0 0 2 1 0 0 0 2 0 0 11 0 1194.6357 P51812 P51812 713 723 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes yes 2 0.0054432 68.463 By MS/MS By MS/MS 1 1 2903100 0 1519700 1383400 2008 1277 2142 6387;6388 4498;4499 4498 1683 2 NQVALNPQNTVFDAK RLIGDAAKNQVALNPQ QNTVFDAKRLIGRKFG K N Q A K R 2 0 3 1 0 2 0 0 0 0 1 1 0 1 1 0 1 0 0 2 0 0 15 0 1657.8424 A0A0G2JIW1;P0DMV9;P0DMV8 A0A0G2JIW1 58 72 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A yes no 2 0.0057743 61.038 By matching By MS/MS 1 1 1603900 539400 1064500 0 2009 222 2143 6389;6390 4500 4500 1 NQVVSSTNGELNTDDPTAGR RDKMQQSKNQVVSSTN TDDPTAGRSNAPITAP K N Q G R S 1 1 3 2 0 1 1 2 0 0 1 0 0 0 1 2 3 0 0 2 0 0 20 0 2073.9563 H0YBN6 H0YBN6 110 129 CSNK1G3 yes yes 2 0.012437 61.11 By MS/MS By matching By matching 1 1 1 2396000 864690 735390 795870 2010 780 2144 6391;6392;6393 4501 4501 3170 1 NQVYHLPENRENSYNRSR EISAMRQRNQVYHLPE ENSYNRSRSSSISSID R N Q S R S 0 3 4 0 0 1 2 0 1 0 1 0 0 0 1 2 0 0 2 1 0 0 18 2 2275.0842 C9JPK3 C9JPK3 774 791 STXBP5L yes yes 2 0.014057 45.257 By MS/MS 1 0 0 0 0 2011 443 2145 6394 4502 4502 582;3649 1 NREELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELR QYDELARKNREELDKY ETTLTELRRTVQSLEI K N R L R R 3 2 1 1 0 3 7 1 0 1 3 1 0 0 0 3 7 1 1 3 0 0 38 2 4312.0983 F8VZY9;P05783 F8VZY9 263 300 KRT18 Keratin, type I cytoskeletal 18 yes no 4 1.1057E-13 56.864 By MS/MS By matching 1 1 13246000 0 7211100 6034600 2012 683 2146 6395;6396 4503 4503 1 NRHSPDHPGMGSSQASSSSSLR KKEKKKKKNRHSPDHP ASSSSSLR________ K N R L R - 1 2 1 1 0 1 0 2 2 0 1 0 1 0 2 8 0 0 0 0 0 0 22 1 2281.0254 J3KR33;A0JLT2 J3KR33 223 244 MED19 Mediator of RNA polymerase II transcription subunit 19 yes no 3 0.009386 45.269 By matching By MS/MS By matching 1 1 1 2227600 868880 707000 651720 2013 291 2147 6397;6398;6399 4504 4504 384 1 NRQQDVRMTANR SRALDDVRNRQQDVRM DVRMTANRKVEQLQQE R N R N R K 1 3 2 1 0 2 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 12 2 1487.7375 Q14258 Q14258 225 236 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.01216 51.528 By MS/MS 1 0 0 0 0 2014 1409 2148 6400 4505 4505 1 NRSAEEGELAESK LKAKLRPRNRSAEEGE EGELAESKSSQKESAV R N R S K S 2 1 1 0 0 0 4 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 13 1 1418.6638 Q9C0C2 Q9C0C2 1664 1676 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 2.1399E-11 113.52 By matching By MS/MS By MS/MS 1 1 1 6636500 2084600 2564200 1987700 2015 1804 2149 6401;6402;6403 4506;4507 4507 2514 2 NRTNMTYEKMSR ARLWGNHKNRTNMTYE MTYEKMSRALRHYYKL K N R S R A 0 2 2 0 0 0 1 0 0 0 0 1 2 0 0 1 2 0 1 0 0 0 12 2 1529.7079 P41212 P41212 385 396 ETV6 Transcription factor ETV6 yes yes 2 0.014888 45.137 By MS/MS 1 0 0 0 0 2016 1235 2150 6404 4508 4508 1592;3316 1 NSASATTPLSGNSSR NYTRPSSRNSASATTP PLSGNSSRRGSGDTSS R N S S R R 2 1 2 0 0 0 0 1 0 0 1 0 0 0 1 5 2 0 0 0 0 0 15 0 1448.6855 C9JSU1;Q9Y608 C9JSU1 79 93 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 2 0.0032592 61.165 By MS/MS By matching 1 1 881020 480740 0 400280 2017 446 2151 6405;6406 4509 4509 584;585;586 1 NSATCHSEDSDLEID VLVLTSVRNSATCHSE EDSDLEID________ R N S I D - 1 0 1 3 1 0 2 0 1 1 1 0 0 0 0 3 1 0 0 0 0 0 15 0 1691.6581 Q13371 Q13371 287 301 PDCL Phosducin-like protein yes yes 2 0.0031542 61.48 By matching By MS/MS By MS/MS 1 1 2 10662000 3822200 3693700 3145600 2018 1386 2152;2153 6407;6408;6409;6410 4510;4511 4510 1840;1841 2 NSATFKSFEDR SRKLGDMRNSATFKSF TFKSFEDRVGTIKSKV R N S D R V 1 1 1 1 0 0 1 0 0 0 0 1 0 2 0 2 1 0 0 0 0 0 11 1 1300.6048 O43399 O43399 160 170 TPD52L2 Tumor protein D54 yes yes 2 0.0014833 103.14 By MS/MS By matching 1 1 16681000 16566000 115630 0 2019 1009 2154 6411;6412 4512 4512 1342 1 NSDDAPWSPK KSRPKKKKNSDDAPWS DDAPWSPKARVTPTLP K N S P K A 1 0 1 2 0 0 0 0 0 0 0 1 0 0 2 2 0 1 0 0 0 0 10 0 1115.4884 H0Y3N9;Q9UPP1;H0Y589 H0Y3N9 741 750 PHF8 Histone lysine demethylase PHF8 yes no 2 0.0014861 84.352 By MS/MS By MS/MS By MS/MS 1 1 1 5177000 1800800 1925300 1450900 2020 748 2155 6413;6414;6415 4513;4514;4515 4515 1024 3 NSDLLTSPDVGLLK LKPHLRAKNSDLLTSP SPDVGLLKLASPELER K N S L K L 0 0 1 2 0 0 0 1 0 0 4 1 0 0 1 2 1 0 0 1 0 0 14 0 1470.793 P05412 P05412 57 70 JUN Transcription factor AP-1 yes yes 2 0.016722 64.945 By MS/MS By matching 1 1 5599600 3344300 2255400 0 2021 1107 2156 6416;6417 4516 4516 3274 1 NSFLGSPR RARLNSIKNSFLGSPR NSFLGSPRFHRRKLQV K N S P R F 0 1 1 0 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 8 0 876.44537 Q8IWQ3;Q8TDC3;H0YES6;J3KNK0 Q8IWQ3 484 491 BRSK2;BRSK1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 yes no 2 0.012518 76.332 By matching By matching By MS/MS 1 1 1 1205500 347820 508610 349050 2022 1611 2157 6418;6419;6420 4517 4517 2208 1 NSITLTNLTPGTEYVVSIVALNGR EDRVPHSRNSITLTNL SIVALNGREESPLLIG R N S G R E 1 1 3 0 0 0 1 2 0 2 3 0 0 0 1 2 4 0 1 3 0 0 24 0 2531.3595 P02751;H0Y7Z1 P02751 1411 1434 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 2;3 2.6878E-85 150.95 By MS/MS By MS/MS By MS/MS 3 2 2 65957000 25527000 18971000 21459000 2023 1095 2158 6421;6422;6423;6424;6425;6426;6427 4518;4519;4520;4521;4522;4523;4524 4521 60 7 NSKYNSLTINNDITLLK LKIAKVFKNSKYNSLT NNDITLLKLSTAASFS K N S L K L 0 0 4 1 0 0 0 0 0 2 3 2 0 0 0 2 2 0 1 0 0 0 17 1 1950.0422 CON__P00766 CON__P00766 91 107 yes yes 3 0.010378 44.312 By MS/MS By matching By matching 1 1 1 2327800 681410 786550 859850 + 2024 463 2159 6428;6429;6430 4525 4525 3029;3030 0 NSLESISSIDR FAAGIGHRNSLESISS ESISSIDRELSPEGPG R N S D R E 0 1 1 1 0 0 1 0 0 2 1 0 0 0 0 4 0 0 0 0 0 0 11 0 1219.6044 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1138 1148 SCRIB Protein scribble homolog yes no 2 0.002165 78.287 By MS/MS By MS/MS By MS/MS 1 2 1 5484600 1373400 2534500 1576600 2025 226 2160 6431;6432;6433;6434 4526;4527;4528 4528 307 3 NSLESYAFNMK QRDKVSSKNSLESYAF ESYAFNMKATVEDEKL K N S M K A 1 0 2 0 0 0 1 0 0 0 1 1 1 1 0 2 0 0 1 0 0 0 11 0 1302.5914 E9PKE3;P11142;A8K7Q2;E9PNE6;E9PM13;E9PS65 E9PKE3 521 531 HSPA8 Heat shock cognate 71 kDa protein yes no 2 0.0050439 60.398 By MS/MS 1 0 0 0 0 2026 598 2161 6435 4529 4529 43 1 NSLSDPNIDR RPSDRNQKNSLSDPNI LSDPNIDRINLVILGK K N S D R I 0 1 2 2 0 0 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 0 10 0 1129.5364 Q9NRY4;A2RRE5 Q9NRY4 588 597 ARHGAP35;GRLF1 Rho GTPase-activating protein 35 yes no 2 0.011993 60.08 By matching By MS/MS By matching 1 1 1 2321400 874620 717380 729410 2027 1854 2162 6436;6437;6438 4530 4530 2614;2615 1 NSNYCLPSYTAYK NMNNRNVKNSNYCLPS LPSYTAYKNYDYSEPG K N S Y K N 1 0 2 0 1 0 0 0 0 0 1 1 0 0 1 2 1 0 3 0 0 0 13 0 1579.6977 Q9Y4E8 Q9Y4E8 260 272 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 0.0068253 63.473 By matching By MS/MS 1 1 684850 0 387950 296900 2028 1969 2163 6439;6440 4531 4531 3939 1 NSPEDLGLSLTGDSCK KTSEIEPKNSPEDLGL SLTGDSCKLMLSTSEY K N S C K L 0 0 1 2 1 0 1 2 0 0 3 1 0 0 1 3 1 0 0 0 0 0 16 0 1691.7672 Q12888;A6NNK5;C9JXV0 Q12888 499 514 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.00097838 73.983 By MS/MS By MS/MS By MS/MS 1 1 1 6698300 2092500 2446600 2159200 2029 1367 2164 6441;6442;6443 4532;4533;4534 4533 1804 3 NSPGSQVASNPR TPHALGSRNSPGSQVA SQVASNPRQAAYEMRM R N S P R Q 1 1 2 0 0 1 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 0 12 0 1212.5847 Q9H0D6 Q9H0D6 447 458 XRN2 5-3 exoribonuclease 2 yes yes 2 0.0047506 69.352 By MS/MS By MS/MS By MS/MS 2 1 1 7349800 3653600 1918300 1778000 2030 1810 2165 6444;6445;6446;6447 4535;4536;4537;4538;4539 4536 2527 5 NSPNNISGISNPPGTPR GDIDGLPKNSPNNISG SNPPGTPRDDGELGGN K N S P R D 0 1 4 0 0 0 0 2 0 2 0 0 0 0 4 3 1 0 0 0 0 0 17 0 1720.8493 Q9NW25;A0A087WVT6;Q9BWW4 Q9NW25 236 252 SSBP3 Single-stranded DNA-binding protein 3 yes no 2 3.6388E-10 94.673 By matching By matching By MS/MS 1 1 1 8851400 3133700 3136700 2581000 2031 53 2166 6448;6449;6450 4540 4540 2880 1 NSPTFKSFEEK TKKLEDVKNSPTFKSF TFKSFEEKVENLKGSP K N S E K V 0 0 1 0 0 0 2 0 0 0 0 2 0 2 1 2 1 0 0 0 0 0 11 1 1312.6299 H0YC42;P55327;E5RK35 H0YC42 170 180 TPD52 Tumor protein D52 yes no 2 0.00026147 105.95 By MS/MS By matching 1 1 7195500 3094900 4100500 0 2032 782 2167 6451;6452 4541 4541 1068;3171 1 NSPVTKTPPR RKFLMECRNSPVTKTP PVTKTPPRDLPTIPGV R N S P R D 0 1 1 0 0 0 0 0 0 0 0 1 0 0 3 1 2 0 0 1 0 0 10 1 1095.6037 Q13541 Q13541 64 73 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 2 0.0020191 87.824 By MS/MS By MS/MS By matching 1 1 1 9393200 2512100 3843200 3038000 2033 1394 2168 6453;6454;6455 4542;4543 4543 1849;3365 2 NSQEDSEDSEDKDVK KNKRRSGKNSQEDSED DSEDKDVKTKKDDSHS K N S V K T 0 0 1 4 0 1 3 0 0 0 0 2 0 0 0 3 0 0 0 1 0 0 15 1 1723.702 Q9H1E3 Q9H1E3 53 67 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 2.0676E-89 163.9 By MS/MS By MS/MS By MS/MS 6 7 4 43277000 13653000 20202000 9421300 2034 1813 2169;2170 6456;6457;6458;6459;6460;6461;6462;6463;6464;6465;6466;6467;6468;6469;6470;6471;6472 4544;4545;4546;4547;4548;4549;4550;4551;4552;4553;4554;4555;4556;4557;4558;4559 4556 2536;2537;2538 16 NSQNPALEWNMASSIRR GVVTETERNSQNPALE NMASSIRRHQERRAIL R N S R R H 2 2 3 0 0 1 1 0 0 1 1 0 1 0 1 3 0 1 0 0 0 0 17 1 1972.9537 Q7Z7G8 Q7Z7G8 1662 1678 VPS13B Vacuolar protein sorting-associated protein 13B yes yes 2 0.014755 45.433 By MS/MS 1 0 0 0 0 2035 1588 2171 6473 4560 4560 2166;2167 1 NSQPHSPTSSLTSGGSLPLLQSPPSTR ISLPLSARNSQPHSPT LQSPPSTRLSPARHPL R N S T R L 0 1 1 0 0 2 0 2 1 0 4 0 0 0 5 8 3 0 0 0 0 0 27 0 2732.3729 Q4VCS5;E7ERM3;A6NP16 Q4VCS5 304 330 AMOT Angiomotin yes no 3 4.6236E-14 85.423 By MS/MS By matching By matching 1 1 1 20617000 8587400 6034100 5995500 2036 1474 2172 6474;6475;6476 4561 4561 1975;3400 1 NSQSFDSSLHGAGNGISR ISSPVTVRNSQSFDSS GAGNGISRIQSCIPSP R N S S R I 1 1 2 1 0 1 0 3 1 1 1 0 0 1 0 5 0 0 0 0 0 0 18 0 1832.8402 X6RGK9;B7Z326;A0A0C4DFN6;A0A0A0MSS3;Q8ND83 X6RGK9 165 182 SLAIN1 SLAIN motif-containing protein 1 yes no 2 0.0020336 64.224 By MS/MS By matching By matching 1 1 1 1848400 661830 599150 587370 2037 155 2173 6477;6478;6479 4562 4562 208 1 NSSLLSFDNEDENE KNSQKQIKNSSLLSFD FDNEDENE________ K N S N E - 0 0 3 2 0 0 3 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 14 0 1611.6536 Q96AT1 Q96AT1 141 154 KIAA1143 Uncharacterized protein KIAA1143 yes yes 2 0.0048162 61.167 By MS/MS By matching By MS/MS 1 1 1 7334000 2473900 2686500 2173700 2038 1719 2174 6480;6481;6482 4563;4564 4564 2362;2363 2 NSSNTSVGSPSNTIGR KLLHNHLKNSSNTSVG SPSNTIGRTPSRHTSS K N S G R T 0 1 3 0 0 0 0 2 0 1 0 0 0 0 1 5 2 0 0 1 0 0 16 0 1576.7441 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 859 874 CLASP1 CLIP-associating protein 1 yes no 2 0.0083568 62.94 By matching By MS/MS By matching 1 1 1 5199700 1874500 1775900 1549400 2039 692 2175 6483;6484;6485 4565 4565 3135 1 NSSPGEASLLEK VTEETDHRNSSPGEAS GEASLLEKETTRFFFF R N S E K E 1 0 1 0 0 0 2 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 12 0 1230.6092 Q76FK4 Q76FK4 1097 1108 NOL8 Nucleolar protein 8 yes yes 2 0.0015229 81.185 By matching By matching By MS/MS 1 1 1 2716200 780610 1072800 862770 2040 1570 2176 6486;6487;6488 4566 4566 2133 1 NSSQSGGKPGSSPITK SSGSSQSKNSSQSGGK PGSSPITKHGLSSGSS K N S T K H 0 0 1 0 0 1 0 3 0 1 0 2 0 0 2 5 1 0 0 0 0 0 16 1 1530.7638 Q15648 Q15648 1145 1160 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.0047626 56.851 By MS/MS By matching By matching 1 1 1 3059600 1000300 1156800 902500 2041 1447 2177 6489;6490;6491 4567 4567 1939;1940 0 NSSTEDKGR KRQSQDVKNSSTEDKG SSTEDKGRLLHSSKEG K N S G R L 0 1 1 1 0 0 1 1 0 0 0 1 0 0 0 2 1 0 0 0 0 0 9 1 992.4523 Q9UGU0 Q9UGU0 1275 1283 TCF20 Transcription factor 20 yes yes 1 0.017388 41.029 By matching By MS/MS By matching 1 1 1 20426000 8899300 5863100 5663800 2042 1903 2178 6492;6493;6494 4568 4568 2680;3530 1 NSSTETDQQPHSPDSSSSVHSIR KSTPEDHRNSSTETDQ SSSVHSIRNMQVPQES R N S I R N 0 1 1 2 0 2 1 0 2 1 0 0 0 0 2 8 2 0 0 1 0 0 23 0 2482.0957 Q92613 Q92613 555 577 JADE3 Protein Jade-3 yes yes 3 0.010201 41.257 By matching By MS/MS By matching 1 1 1 3826300 1709500 1605600 511170 2043 1698 2179 6495;6496;6497 4569 4569 2330 1 NSSYFVEWIPNNVK QMLNVQNKNSSYFVEW EWIPNNVKTAVCDIPP K N S V K T 0 0 3 0 0 0 1 0 0 1 0 1 0 1 1 2 0 1 1 2 0 0 14 0 1695.8257 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A0B4J269;Q13509;K7ESM5;Q9BUF5;P68371;P04350 Q5JP53 319 332 TUBB;TUBB2B;TUBB2A;TUBB3;TUBB6;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 2 0.0090293 60.255 By MS/MS By matching By matching 1 1 1 3226200 1581500 990680 654070 2044 1118;1319 2180 6498;6499;6500 4570 4570 1 NSTVEYTLNKLEPGGK RSYKVKSRNSTVEYTL NKLEPGGKYHIIVQLG R N S G K Y 0 0 2 0 0 0 2 2 0 0 2 2 0 0 1 1 2 0 1 1 0 0 16 1 1748.8945 E9PKB0;E9PS32;E9PP43;E9PPB3;Q92673 E9PKB0 601 616 SORL1 Sortilin-related receptor yes no 2 0.01124 44.196 By matching By matching By MS/MS 1 1 1 4329600 1312300 1744700 1272600 2045 597 2181 6501;6502;6503 4571 4571 3100;3101 1 NSVDELNNNVEAVSQTSSSSFQYMYLLK LQQERPIRNSVDELNN FQYMYLLKDLWQKRQK R N S L K D 1 0 4 1 0 2 2 0 0 0 3 1 1 1 0 6 1 0 2 3 0 0 28 0 3166.4765 P02675 P02675 125 152 FGB Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes yes 3 0.0050275 40.819 By matching By MS/MS By matching 1 2 1 15438000 5149200 5408200 4880200 2046 1094 2182;2183 6504;6505;6506;6507 4572;4573 4573 81 2 NSVVEASEAAYK EVASGEKKNSVVEASE EASEAAYKEAFEISKE K N S Y K E 3 0 1 0 0 0 2 0 0 0 0 1 0 0 0 2 0 0 1 2 0 0 12 0 1266.6092 Q04917;A2IDB2 Q04917 144 155 YWHAH 14-3-3 protein eta yes no 2 0.012716 61.593 By MS/MS 1 284840 0 284840 0 2047 1342 2184 6508 4574 4574 1 NTEESSSPVRK VDTEPQKRNTEESSSP ESSSPVRKESSRGRHR R N T R K E 0 1 1 0 0 0 2 0 0 0 0 1 0 0 1 3 1 0 0 1 0 0 11 1 1232.5997 Q5T200 Q5T200 104 114 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 1.48E-05 110.64 By MS/MS By MS/MS By MS/MS 1 2 1 14994000 5267600 5735500 3990800 2048 1501 2185 6509;6510;6511;6512 4575;4576;4577 4576 2025;2026;2027 3 NTFAEVTGLSPGVTYYFK GQRLPISRNTFAEVTG PGVTYYFKVFAVSHGR R N T F K V 1 0 1 0 0 0 1 2 0 0 1 1 0 2 1 1 3 0 2 2 0 0 18 0 1992.9833 P02751 P02751 959 976 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 2 6.3394E-06 85.457 By MS/MS By MS/MS By MS/MS 1 1 1 13164000 5382300 4081000 3700300 2049 1095 2186 6513;6514;6515 4578;4579;4580 4579 3 NTLIIYLDK LDKAFSDRNTLIIYLD TLIIYLDKVSHSEDDC R N T D K V 0 0 1 1 0 0 0 0 0 2 2 1 0 0 0 0 1 0 1 0 0 0 9 0 1091.6227 M0QYC8;CON__Q2UVX4;P01024 M0QYC8 149 157 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha chain;Complement C3c alpha chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha chain fragment 2 yes no 2 0.0058845 85.676 By MS/MS By matching By MS/MS 1 1 1 1213500 541740 339360 332430 + 2050 473 2187 6516;6517;6518 4581;4582 4582 2 NTLSLVNDFIIR NQTHAIYKNTLSLVND LVNDFIIRDTILNINF K N T I R D 0 1 2 1 0 0 0 0 0 2 2 0 0 1 0 1 1 0 0 1 0 0 12 0 1403.7773 P55259 P55259 299 310 GP2 Pancreatic secretory granule membrane major glycoprotein GP2 yes yes 2 0.00079336 88.134 By MS/MS By matching 1 1 1692100 0 944160 747960 2051 1297 2188 6519;6520 4583 4583 1 NTLYLQMSSLR TISRDNSKNTLYLQMS YLQMSSLRAEDTAVYY K N T L R A 0 1 1 0 0 1 0 0 0 0 3 0 1 0 0 2 1 0 1 0 0 0 11 0 1324.6809 A0A0J9YX35 A0A0J9YX35 96 106 yes yes 2 0.016621 53.567 By matching By matching By MS/MS 1 1 1 11668000 3588600 4316100 3763100 2052 240 2189 6521;6522;6523 4584 4584 323 1 NTPASASLEGLAQTAGR KKKKPRTKNTPASASL GLAQTAGRRPSEGNEP K N T G R R 4 1 1 0 0 1 1 2 0 0 2 0 0 0 1 2 2 0 0 0 0 0 17 0 1642.8275 F2Z329;A0A087WWU1;Q96Q45 F2Z329 43 59 TMEM237 Transmembrane protein 237 yes no 2 0.001246 72.184 By matching By MS/MS By matching 1 1 1 2410700 1075800 1153000 181930 2053 66 2190 6524;6525;6526 4585 4585 86 1 NTPSQHSHSIQHSPER LSTVHSAKNTPSQHSH SIQHSPERSGSGSVGN K N T E R S 0 1 1 0 0 2 1 0 3 1 0 0 0 0 2 4 1 0 0 0 0 0 16 0 1840.8565 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09;E9PJA7 E9PK91 256 271 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2;3;4 1.2619E-08 99.813 By MS/MS By MS/MS By MS/MS 4 4 4 766230000 243670000 325940000 196620000 2054 596 2191;2192 6527;6528;6529;6530;6531;6532;6533;6534;6535;6536;6537;6538 4586;4587;4588;4589;4590;4591;4592;4593;4594;4595 4591 797;798;799;3099 10 NTSLPPLWSPEAER DKDITVSKNTSLPPLW LWSPEAERSHSLSQHT K N T E R S 1 1 1 0 0 0 2 0 0 0 2 0 0 0 3 2 1 1 0 0 0 0 14 0 1595.7944 P49790 P49790 201 214 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.0060945 57.804 By MS/MS By matching By matching 1 1 1 2430700 959180 804550 666960 2055 1260 2193 6539;6540;6541 4596 4596 1658 1 NTSLSKFQTSHICK SRKQCALKNTSLSKFQ FQTSHICKGSALQPQQ K N T C K G 0 0 1 0 1 1 0 0 1 1 1 2 0 1 0 3 2 0 0 0 0 0 14 1 1649.8195 Q6AWC8 Q6AWC8 30 43 Putative uncharacterized protein LOC100129027 yes yes 2 0.013861 48.284 By MS/MS 1 0 0 0 0 2056 1533 2194 6542 4597 4597 2085;2086;3425 1 NTVVVSPHPK ATHQSEPKNTVVVSPH VVVSPHPKTSGENMAS K N T P K T 0 0 1 0 0 0 0 0 1 0 0 1 0 0 2 1 1 0 0 3 0 0 10 0 1076.5978 Q9NXL9 Q9NXL9 757 766 MCM9 DNA helicase MCM9 yes yes 2 0.0051626 67.519 By matching By MS/MS By matching 1 1 1 1674600 684990 622100 367480 2057 1876 2195 6543;6544;6545 4598 4598 2644 1 NVALLSQLYHSPAR AANPNQNKNVALLSQL QLYHSPARRFGGPVHH K N V A R R 2 1 1 0 0 1 0 0 1 0 3 0 0 0 1 2 0 0 1 1 0 0 14 0 1567.8471 Q15717 Q15717 192 205 ELAVL1 ELAV-like protein 1 yes yes 2 1.2845E-05 100.41 By MS/MS By MS/MS By MS/MS 1 1 1 2288100 1049800 655820 582490 2058 1450 2196 6546;6547;6548 4599;4600;4601 4600 1943 3 NVFSSSGTSFSGR FTVGSNGKNVFSSSGT SGTSFSGRKIKTAVRR K N V G R K 0 1 1 0 0 0 0 2 0 0 0 0 0 2 0 5 1 0 0 1 0 0 13 0 1331.6106 P49790 P49790 1453 1465 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.00949 55.724 By matching By MS/MS By matching 1 1 1 1156100 444820 340480 370840 2059 1260 2197 6549;6550;6551 4602 4602 1659 1 NVLIVEDIIDTGK DLSTLTGKNVLIVEDI EDIIDTGKTMQTLLSL K N V G K T 0 0 1 2 0 0 1 1 0 3 1 1 0 0 0 0 1 0 0 2 0 0 13 0 1427.7872 P00492 P00492 129 141 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.0068473 69.65 By matching By matching By MS/MS 1 1 1 2818600 1178800 684310 955480 2060 1080 2198 6552;6553;6554 4603 4603 1 NVMTIITGYPTPGSKLSLR PKGVKLNKNVMTIITG PGSKLSLRNFIEFVFP K N V L R N 0 1 1 0 0 0 0 2 0 2 2 1 1 0 2 2 3 0 1 1 0 0 19 1 2047.1136 A6NKG5 A6NKG5 792 810 RTL1 Retrotransposon-like protein 1 yes yes 3 0.016472 44.005 By MS/MS 1 0 0 0 0 2061 307 2199 6555 4604 4604 407;408;2973 1 NVQALEIELQSQLALK SEITELRRNVQALEIE LQSQLALKQSLEASLA R N V L K Q 2 0 1 0 0 3 2 0 0 1 4 1 0 0 0 1 0 0 0 1 0 0 16 0 1796.0044 CON__P13645;P13645 CON__P13645 371 386 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 5.701E-237 209.25 By MS/MS By matching By matching 2 2 1 13611000 11554000 1121800 935910 + 2062 471 2200 6556;6557;6558;6559;6560 4605;4606 4606 2 NVQFVFDAVTDVIIK FTCATDTKNVQFVFDA AVTDVIIKNNLKDCGL K N V I K N 1 0 1 2 0 1 0 0 0 2 0 1 0 2 0 0 1 0 0 4 0 0 15 0 1706.9243 P63096;P08754;P04899 P63096 331 345 GNAI1;GNAI3;GNAI2 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 2 6.6695E-07 96.604 By MS/MS By MS/MS 1 1 2766000 1660600 1105400 0 2063 1105 2201 6561;6562 4607;4608 4607 2 NVSSFPDDATSPLQENR DDQMLKRRNVSSFPDD TSPLQENRNNQGTVNW R N V N R N 1 1 2 2 0 1 1 0 0 0 1 0 0 1 2 3 1 0 0 1 0 0 17 0 1875.8599 J3QLL0;J3KS65;P52292 J3QLL0 52 68 KPNA2 Importin subunit alpha-1 yes no 2 4.8664E-284 208.85 By MS/MS By MS/MS By MS/MS 1 1 1 18777000 5756600 6769200 6250900 2064 916 2202 6563;6564;6565 4609;4610;4611;4612 4612 1228;3216 4 NVTELNEPLSNEER DDMAAAMKNVTELNEP EPLSNEERNLLSVAYK K N V E R N 0 1 3 0 0 0 4 0 0 0 2 0 0 0 1 1 1 0 0 1 0 0 14 0 1642.7798 P61981 P61981 29 42 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 2 0.0022478 72.958 By matching By MS/MS By matching 1 1 1 1426300 443890 689300 293150 2065 1307 2203 6566;6567;6568 4613 4613 1 NVVFVIDISGSMR QNLTNMNKNVVFVIDI IDISGSMRGQKVKQTK K N V M R G 0 1 1 1 0 0 0 1 0 2 0 0 1 1 0 2 0 0 0 3 0 0 13 0 1435.7493 P19827 P19827 292 304 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes yes 2 0.018191 46.352 By MS/MS By matching 1 1 245680 157570 0 88108 2066 1178 2204 6569;6570 4614 4614 0 NVYATTVGTPYK DRLKKYEKNVYATTVG TTVGTPYKGGNLYHTD K N V Y K G 1 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 3 0 2 2 0 0 12 0 1312.6663 Q13439;H0Y6I0 Q13439 2146 2157 GOLGA4 Golgin subfamily A member 4 yes no 2 0.017228 51.927 By MS/MS By matching 1 1 1092000 0 574480 517550 2067 1390 2205 6571;6572 4615 4615 3834 0 NYGSYSTQASAAAATAELLK KLSPTEPKNYGSYSTQ AATAELLKKQEELNRK K N Y L K K 6 0 1 0 0 1 1 1 0 0 2 1 0 0 0 3 2 0 2 0 0 0 20 0 2015.98 O14828 O14828 82 101 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 0.0024712 67.102 By matching By matching By MS/MS 1 1 1 3499100 528310 1315400 1655400 2068 984 2206 6573;6574;6575 4616 4616 3742 1 NYGYNPSPVKPEGLR SVVTESSRNYGYNPSP PVKPEGLRRPPSKTSM R N Y L R R 0 1 2 0 0 0 1 2 0 0 1 1 0 0 3 1 0 0 2 1 0 0 15 1 1689.8475 E9PRF4;Q15047 E9PRF4 1060 1074 SETDB1 Histone-lysine N-methyltransferase SETDB1 yes no 2 0.0045703 64.842 By MS/MS By matching By MS/MS 1 1 1 6846800 2484600 2364600 1997600 2069 620 2207 6576;6577;6578 4617;4618 4617 839 2 NYHNRTVEVRTLK FYLKTVFKNYHNRTVE TVEVRTLKSFSTLANN K N Y L K S 0 2 2 0 0 0 1 0 1 0 1 1 0 0 0 0 2 0 1 2 0 0 13 2 1628.8747 Q13007 Q13007 123 135 IL24 Interleukin-24 yes yes 3 0.016462 40.767 By MS/MS 1 0 0 0 0 2070 1373 2208 6579 4619 4619 3360;3833 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR PRRRGPPRNYQQNYQN PEGQAQQRRPYRRRRF R N Y Q R R 2 1 4 0 0 6 5 3 0 0 0 1 0 0 1 4 0 0 2 0 0 0 29 1 3256.3889 H0Y449;P67809;C9J5V9 H0Y449 207 235 YBX1 Nuclease-sensitive element-binding protein 1 yes no 3 1.3469E-06 58.812 By MS/MS By MS/MS By matching 1 1 1 9915500 4694800 2945800 2274900 2071 750 2209 6580;6581;6582 4620;4621;4622 4620 3 NYSREQHGVAASCLEDLR LKPCLLRRNYSREQHG ASCLEDLRSKACDILA R N Y L R S 2 2 1 1 1 1 2 1 1 0 2 0 0 0 0 2 0 0 1 1 0 0 18 1 2103.9756 O00273;K7ERT1 O00273 26 43 DFFA DNA fragmentation factor subunit alpha yes no 3 0.0022778 60.307 By matching By MS/MS By MS/MS 1 1 1 2147300 864520 722720 560100 2072 974 2210 6583;6584;6585 4623;4624 4624 1287;3736 2 NYSSPPPCHLSR DSNRIGRRNYSSPPPC PPPCHLSRQVPYDEIS R N Y S R Q 0 1 1 0 1 0 0 0 1 0 1 0 0 0 3 3 0 0 1 0 0 0 12 0 1413.6459 Q12986 Q12986 47 58 NFX1 Transcriptional repressor NF-X1 yes yes 2 0.0066973 64.121 By MS/MS By MS/MS By matching 1 1 1 3572700 1225800 1190100 1156800 2073 1372 2211 6586;6587;6588 4625;4626 4626 1813 2 NYTEDLSK SSDSLADKNYTEDLSK NYTEDLSKLQLPLFRS K N Y S K L 0 0 1 1 0 0 1 0 0 0 1 1 0 0 0 1 1 0 1 0 0 0 8 0 968.44509 H7C5G2;G5E9V4;Q969F9 H7C5G2 230 237 HPS3 Hermansky-Pudlak syndrome 3 protein yes no 2 0.015485 86.833 By MS/MS By matching By matching 2 1 1 3269700 1601700 865100 802940 2074 738 2212 6589;6590;6591;6592 4627 4627 3704 1 NYVGMQNCPK CAEVPEQKNYVGMQNC VGMQNCPKDGFPVPAN K N Y P K D 0 0 2 0 1 1 0 1 0 0 0 1 1 0 1 0 0 0 1 1 0 0 10 0 1209.5271 F8VUJ3;Q8N4A0 F8VUJ3 508 517 POC1B-GALNT4;GALNT4 Polypeptide N-acetylgalactosaminyltransferase;Polypeptide N-acetylgalactosaminyltransferase 4 yes no 2 0.016689 45.081 By MS/MS 1 0 0 0 0 2075 671 2213 6593 4628 4628 3692 1 NYVTPVNRNV GQTGMFPRNYVTPVNR VTPVNRNV________ R N Y N V - 0 1 3 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 3 0 0 10 1 1174.6095 P62993 P62993 208 217 GRB2 Growth factor receptor-bound protein 2 yes yes 2 0.011987 73.248 By MS/MS 1 1371800 1371800 0 0 2076 1316 2214 6594 4629 4629 1 PAISDETWK P A W K 1 0 0 1 0 0 1 0 0 1 0 1 0 0 1 1 1 1 0 0 0 0 9 0 1045.508 REV__C9JDR3 yes no 2 0.0080693 70.912 By matching By matching By MS/MS 1 1 2 1385600 456590 367740 561310 + 2077 1988 2215 6595;6596;6597;6598 4630 4630 2843 1 PAKSMDSLCSVPVEGK SVEKATIRPAKSMDSL CSVPVEGKETKGNFNR R P A G K E 1 0 0 1 1 0 1 1 0 0 1 2 1 0 2 3 0 0 0 2 0 0 16 1 1703.8222 Q2M1Z3 Q2M1Z3 343 358 ARHGAP31 Rho GTPase-activating protein 31 yes yes 3 0.017725 40.278 By MS/MS 1 0 0 0 0 2078 1463 2216 6599 4631 4631 1960;1961 1 PAMPQDSVPSPR VAPAKKAKPAMPQDSV QDSVPSPRSLQGKSTT K P A P R S 1 1 0 1 0 1 0 0 0 0 0 0 1 0 4 2 0 0 0 1 0 0 12 0 1280.6183 P53396 P53396 472 483 ACLY ATP-citrate synthase yes yes 2 0.0069532 66.023 By MS/MS By MS/MS By matching 1 1 1 824450 0 679860 144590 2079 1289 2217 6600;6601;6602 4632;4633 4633 1699;1700 2 PASPDRFAVSAEAENK ________________ VSAEAENKVREQQPHV R P A N K V 4 1 1 1 0 0 2 0 0 0 0 1 0 1 2 2 0 0 0 1 0 0 16 1 1687.8166 G3V331;O15037 G3V331 8 23 KHNYN Protein KHNYN yes no 3 0.0046159 53.038 By matching By matching By MS/MS 1 1 1 1249500 409640 453610 386210 2080 715 2218 6603;6604;6605 4634 4634 964 1 PATPGASSVEQLRK GPGTPEPRPATPGASS SSVEQLRKEGNELFKC R P A R K E 2 1 0 0 0 1 1 1 0 0 1 1 0 0 2 2 1 0 0 1 0 0 14 1 1439.7732 Q9H3U1 Q9H3U1 13 26 UNC45A Protein unc-45 homolog A yes yes 2;3 0.0011297 68.033 By MS/MS By MS/MS By MS/MS 2 2 2 10518000 4078700 3217700 3221100 2081 1821 2219 6606;6607;6608;6609;6610;6611 4635;4636;4637;4638 4635 3502 4 PCSEETPAISPSK ________________ TPAISPSKRARPAEVG M P C S K R 1 0 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 13 0 1401.6446 H0YNJ9 H0YNJ9 2 14 DUT yes yes 2 1.4571E-07 106.76 By MS/MS By MS/MS By MS/MS 1 1 1 16388000 5097300 5648300 5642300 2082 811 2220 6612;6613;6614 4639;4640;4641;4642;4643 4643 1099;1100 5 PCSEETPAISPSKR ________________ PAISPSKRARPAEVGG M P C K R A 1 1 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 0 14 1 1557.7457 H0YNJ9 H0YNJ9 2 15 DUT yes yes 2;3 0 249.36 By MS/MS By MS/MS By MS/MS 3 2 3 425130000 164540000 143150000 117450000 2083 811 2221 6615;6616;6617;6618;6619;6620;6621;6622 4644;4645;4646;4647;4648;4649;4650;4651;4652;4653;4654;4655;4656 4651 1099;1100 12 PDYNEMVGECWLQSARVAR ALLSLNKRPDYNEMVG LQSARVARKAGHHQTA R P D A R K 2 2 1 1 1 1 2 1 0 0 1 0 1 0 1 1 0 1 1 2 0 0 19 1 2280.0416 Q13535 Q13535 1914 1932 ATR Serine/threonine-protein kinase ATR yes yes 3 0.0033803 52.522 By matching By MS/MS 1 1 740050 384140 355910 0 2084 1393 2222 6623;6624 4657 4657 87;134 138 1 PEFLEDPSVLTK ________________ EDPSVLTKDKLKSELV M P E T K D 0 0 0 1 0 0 2 0 0 0 2 1 0 1 2 1 1 0 0 1 0 0 12 0 1373.7078 G5E972;P42167;P42166 G5E972 2 13 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 2 0.012332 62.463 By MS/MS 1 239880 0 239880 0 2085 734;1237 2223 6625 4658 4658 1 PEIDKAVVVSPSSLVK LRQSPECKPEIDKAVV VSPSSLVKNWYNEVGK K P E V K N 1 0 0 1 0 0 1 0 0 1 1 2 0 0 2 3 0 0 0 4 0 0 16 1 1666.9505 A0A087X124;A0A087WW72;A0A087WTB0;Q92698 A0A087X124 10 25 RAD54L DNA repair and recombination protein RAD54-like yes no 3 0.013402 45.084 By MS/MS By matching 1 1 656880 368890 0 288000 2086 20 2224 6626;6627 4659 4659 21;22 1 PELVTLEAVESR P E S R 1 1 0 0 0 0 3 0 0 0 2 0 0 0 1 1 1 0 0 2 0 0 12 0 1341.714 REV__A0A087WZ85 yes no 3 0.015597 45.207 By matching By matching By MS/MS 1 1 2 2001000 405810 557280 1037900 + 2087 1983 2225 6628;6629;6630;6631 4660 4660 2835 1 PESDGGSEISGYIIER SMTLCWSRPESDGGSE ISGYIIERREKNSLRW R P E E R R 0 1 0 1 0 0 3 3 0 3 0 0 0 0 1 3 0 0 1 0 0 0 16 0 1707.7952 A0A0A0MTS7;Q8WZ42;A0A0A0MRA3 A0A0A0MTS7 28574 28589 TTN Titin yes no 2 0.0164 40.552 By MS/MS By matching By matching 1 1 1 1310400 521210 397160 392050 2088 171 2226 6632;6633;6634 4661 4661 234;3594 0 PFEVKDTEEEDFHVDQVTTVK FFKGKWERPFEVKDTE VDQVTTVKVPMMKRLG R P F V K V 0 0 0 3 0 1 4 0 1 0 0 2 0 2 1 0 3 0 0 4 0 0 21 1 2491.1755 P01009 P01009 221 241 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes yes 4 0.010415 35.159 By MS/MS 1 597140 597140 0 0 2089 1085 2227 6635 4662 4662 1 PFGSVSSPK MAYNKAPRPFGSVSSP FGSVSSPKVTSIPSPS R P F P K V 0 0 0 0 0 0 0 1 0 0 0 1 0 1 2 3 0 0 0 1 0 0 9 0 904.46543 Q96HC4;A0A0D9SFR4 Q96HC4 131 139 PDLIM5 PDZ and LIM domain protein 5 yes no 2 0.0039571 82.831 By MS/MS By matching By MS/MS 1 1 1 1777200 539980 567660 669590 2090 1740 2228 6636;6637;6638 4663;4664 4664 2391 2 PFIYQEVIDLGGEPIK NWFPAGSKPFIYQEVI DLGGEPIKSSDYFGNG K P F I K S 0 0 0 1 0 1 2 2 0 3 1 1 0 1 2 0 0 0 1 1 0 0 16 0 1816.9611 P19961;P04746;P04745 P19961 243 258 AMY2B;AMY2A;AMY1A Alpha-amylase 2B;Pancreatic alpha-amylase;Alpha-amylase 1 yes no 2 1.1884E-16 131.26 By MS/MS 1 3230300 0 3230300 0 2091 1104 2229 6639 4665 4665 1 PFNQSSSLSSLR FPPGDAKKPFNQSSSL SSSLSSLRELYKDANL K P F L R E 0 1 1 0 0 1 0 0 0 0 2 0 0 1 1 5 0 0 0 0 0 0 12 0 1321.6626 E9PMZ8;Q8IVF5 E9PMZ8 289 300 TIAM2 T-lymphoma invasion and metastasis-inducing protein 2 yes no 2 0.015614 41.644 By MS/MS 1 0 0 0 0 2092 610 2230 6640 4666 4666 824;825;826;827 1 PFSNSHNALK ________________ SNSHNALKLRFPAEDE M P F L K L 1 0 2 0 0 0 0 0 1 0 1 1 0 1 1 2 0 0 0 0 0 0 10 0 1113.5567 G3V4N7;P12277;G3V2I1 G3V4N7 2 11 CKB Creatine kinase B-type yes no 2 0.0070826 65.241 By matching By matching By MS/MS 1 1 1 3474200 1250600 1278700 944980 2093 722 2231 6641;6642;6643 4667 4667 974 1 PGFVIDIYTGLPVDIDECR ATLCGSQRPGFVIDIY PVDIDECREIPGVCEN R P G C R E 0 1 0 3 1 0 1 2 0 3 1 0 0 1 2 0 1 0 1 2 0 0 19 0 2178.0667 H0YND0;P35555 H0YND0 189 207 FBN1 Fibrillin-1 yes no 2 5.043E-19 102.97 By matching By matching By MS/MS 1 1 1 22746000 11435000 5709400 5602100 2094 810 2232 6644;6645;6646 4668 4668 1 PGGPPNPPGPSPK LKRRTQSRPGGPPNPP NPPGPSPKALAKMMGG R P G P K A 0 0 1 0 0 0 0 3 0 0 0 1 0 0 7 1 0 0 0 0 0 0 13 0 1197.6142 B9EGQ5;M0QXA7;O95785 B9EGQ5 277 289 WIZ Protein Wiz yes no 2 0.006124 63.292 By matching By MS/MS 1 1 907650 0 493990 413660 2095 391 2233 6647;6648 4669 4669 520 1 PGLVTVTSSQSTPAK SQKKKESRPGLVTVTS SSQSTPAKAPRAKCNP R P G A K A 1 0 0 0 0 1 0 1 0 0 1 1 0 0 2 3 3 0 0 2 0 0 15 0 1471.7882 F5GZ90;Q9NZJ0 F5GZ90 376 390 DTL Denticleless protein homolog yes no 2 0.018347 58.63 By MS/MS By matching By matching 1 1 1 1193600 375920 312600 505100 2096 640 2234 6649;6650;6651 4670 4670 858;859;3110 1 PGPTPSGTNVGSSGR ________________ TNVGSSGRSPSKAVAA M P G G R S 0 1 1 0 0 0 0 4 0 0 0 0 0 0 3 3 2 0 0 1 0 0 15 0 1369.6586 P60468 P60468 2 16 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.006923 53.377 By matching By MS/MS 1 1 1232000 545760 686220 0 2097 1304 2235 6652;6653 4671 4671 1713;1714;1715 1 PGPTPSGTNVGSSGRSPSK ________________ SSGRSPSKAVAARAAG M P G S K A 0 1 1 0 0 0 0 4 0 0 0 1 0 0 4 5 2 0 0 1 0 0 19 1 1768.8704 P60468 P60468 2 20 SEC61B Protein transport protein Sec61 subunit beta yes yes 3 0.0018835 64.87 By MS/MS By MS/MS By MS/MS 1 1 1 102680000 37182000 42191000 23310000 2098 1304 2236 6654;6655;6656 4672;4673;4674 4673 1713;1714;1715;1716 3 PGTPSDHQSQEASQFER QTSSSSARPGTPSDHQ QEASQFERKDEPKTEQ R P G E R K 1 1 0 1 0 3 2 1 1 0 0 0 0 1 2 3 1 0 0 0 0 0 17 0 1899.8347 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1 I1E4Y6 402 418 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 3 0.0052224 61.962 By matching By MS/MS By MS/MS 1 1 1 2897000 685360 1278600 933100 2099 881 2237 6657;6658;6659 4675;4676 4676 3199 2 PGVTEATITGLEPGTEYTIYVIALK REVVPRPRPGVTEATI TIYVIALKNNQKSEPL R P G L K N 2 0 0 0 0 0 3 3 0 3 2 1 0 0 2 0 5 0 2 2 0 0 25 0 2635.3997 P02751;H0Y7Z1;H0Y4K8 P02751 1953 1977 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 5.1952E-89 147.08 By MS/MS By MS/MS 1 1 8154200 0 4785800 3368400 2100 1095 2238 6660;6661 4677;4678 4677 2 PGWLSSPTLGR GGPLPLPRPGWLSSPT LSSPTLGRANRFLSTA R P G G R A 0 1 0 0 0 0 0 2 0 0 2 0 0 0 2 2 1 1 0 0 0 0 11 0 1169.6193 C9JS59;C9J266;Q5XPI4 C9JS59 670 680 RNF123 E3 ubiquitin-protein ligase RNF123 yes no 2 0.0057293 67.993 By MS/MS By matching By MS/MS 1 1 1 2395700 1013900 742220 639560 2101 407 2239 6662;6663;6664 4679;4680 4680 545 2 PHGTIYLASKMR GTLQHLCRPHGTIYLA IYLASKMRKEHGTESF R P H M R K 1 1 0 0 0 0 0 1 1 1 1 1 1 0 1 1 1 0 1 0 0 0 12 1 1372.7285 Q96AZ1 Q96AZ1 172 183 METTL21B Protein-lysine methyltransferase METTL21B yes yes 2 0.007205 46.158 By MS/MS By matching By matching 1 1 1 1492300 460830 659190 372260 2102 1720 2240 6665;6666;6667 4681 4681 160 3473;3890 1 PIFGGTVYHSPVSR ATANSSIRPIFGGTVY VYHSPVSRLPPSGSKP R P I S R L 0 1 0 0 0 0 0 2 1 1 0 0 0 1 2 2 1 0 1 2 0 0 14 0 1515.7834 G3V3N7;O43663;H0YNE4 G3V3N7 121 134 PRC1 Protein regulator of cytokinesis 1 yes no 3 0.0053619 51.147 By matching By MS/MS 1 1 858440 0 406040 452410 2103 718 2241 6668;6669 4682 4682 969 1 PIITGYKSSLR TVLGIPQKPIITGYKS TGYKSSLREKDTATLN K P I L R E 0 1 0 0 0 0 0 1 0 2 1 1 0 0 1 2 1 0 1 0 0 0 11 1 1233.7081 A0A0C4DG09;Q8N126 A0A0C4DG09 133 143 CADM3 Cell adhesion molecule 3 yes no 2 0.0072207 58.433 By MS/MS By matching By matching 1 1 1 2824500 1356000 662890 805680 2104 185 2242 6670;6671;6672 4683 4683 2933;3596 1 PKFQSPQIQATISPPLQPK EEQQPKSRPKFQSPQI ISPPLQPKTKTYEEDP R P K P K T 1 0 0 0 0 4 0 0 0 2 1 2 0 1 5 2 1 0 0 0 0 0 19 1 2104.1681 A0A087WYN9;Q7Z478 A0A087WYN9 188 206 DHX29 ATP-dependent RNA helicase DHX29 yes no 2 0.018297 41.644 By MS/MS 1 0 0 0 0 2105 81 2243 6673 4684 4684 98;99;2888 1 PLEGSSSEDSPPEGQAPPSHSPR QREDPQARPLEGSSSE APPSHSPRGTKRRASW R P L P R G 1 1 0 1 0 1 3 2 1 0 1 0 0 0 6 6 0 0 0 0 0 0 23 0 2344.0567 Q12789 Q12789 1836 1858 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.0012587 53.496 By MS/MS By matching By matching 1 1 1 3086300 1102400 1220900 763030 2106 1363 2244 6674;6675;6676 4685 4685 1792;1793 1 PLEMSSEAKATSQSSER VKDYISAKPLEMSSEA ATSQSSERKNEGSCGP K P L E R K 2 1 0 0 0 1 3 0 0 0 1 1 1 0 1 5 1 0 0 0 0 0 17 1 1836.8524 Q9NQZ5 Q9NQZ5 340 356 STARD7 StAR-related lipid transfer protein 7, mitochondrial yes yes 2 0.013718 45.433 By MS/MS 1 0 0 0 0 2107 1849 2245 6677 4686 4686 2597;2598;2599;3510 1 PLLKSAETEKEMATMK MKLFFKIKPLLKSAET EKEMATMKEEFQKTKD K P L M K E 2 0 0 0 0 0 3 0 0 0 2 3 2 0 1 1 2 0 0 0 0 0 16 2 1805.9267 P13535;P13533;P11055;Q9UKX2 P13535 841 856 MYH8;MYH6;MYH3;MYH2 Myosin-8;Myosin-6;Myosin-3;Myosin-2 yes no 2 0.0078296 40.589 By MS/MS 1 1706300 0 0 1706300 2108 1142 2246 6678 4687 4687 101;102 3286;3287 1 PLLVDVDLQYPQDAVLALTQNHHK GFYSQVAKPLLVDVDL ALTQNHHKQYYEGSEI K P L H K Q 2 0 1 3 0 3 0 0 2 0 5 1 0 0 2 0 1 0 1 3 0 0 24 0 2726.4392 P19827;H7C0N0 P19827 478 501 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 4 1.3904E-08 82.635 By MS/MS By MS/MS By MS/MS 1 1 1 6657600 3952500 1077800 1627300 2109 1178 2247 6679;6680;6681 4688;4689;4690;4691;4692 4692 5 PLTSPESLSR AAKAAGARPLTSPESL TSPESLSRDLEAPEVQ R P L S R D 0 1 0 0 0 0 1 0 0 0 2 0 0 0 2 3 1 0 0 0 0 0 10 0 1085.5717 A0A024RCR6;A0A0G2JK23;P46379 A0A024RCR6 1072 1081 BAT3;BAG6 Large proline-rich protein BAG6 yes no 2 0.0047294 69.721 By MS/MS By matching By matching 1 1 1 2199800 706550 871040 622170 2110 4 2248 6682;6683;6684 4693 4693 1 1 PLYEGLGSGGEK ________________ GLGSGGEKTAVVIDLG M P L E K T 0 0 0 0 0 0 2 4 0 0 2 1 0 0 1 1 0 0 1 0 0 0 12 0 1205.5928 G3V4K6;G3V524;G3V2Q5;G3V5Y4;F6S9Y6;Q9NZ32 G3V4K6 2 13 ACTR10 Actin-related protein 10 yes no 2 0.00016219 104.42 By MS/MS By matching By MS/MS 1 1 1 6684100 2514000 2225500 1944600 2111 662 2249 6685;6686;6687 4694;4695;4696 4694 3688 3 PMFIVNTNVPR ________________ IVNTNVPRASVPDGFL M P M P R A 0 1 2 0 0 0 0 0 0 1 0 0 1 1 2 0 1 0 0 2 0 0 11 0 1286.6805 P14174 P14174 2 12 MIF Macrophage migration inhibitory factor yes yes 2 0.018641 76.17 By matching By MS/MS By matching 1 1 1 1054800 292710 633120 128970 2112 1158 2250 6688;6689;6690 4697 4697 1 PMPELPPMGDNTK GWPAVSPKPMPELPPM PPMGDNTKSQLAMSAN K P M T K S 0 0 1 1 0 0 1 1 0 0 1 1 2 0 4 0 1 0 0 0 0 0 13 0 1425.6632 P59827 P59827 405 417 BPIFB4 BPI fold-containing family B member 4 yes yes 2 0.0038368 52.071 By MS/MS 1 1121900 0 1121900 0 2113 1302 2251 6691 4698 4698 81 129 3342 1 PNTSYEFQVKPK FSTVENLKPNTSYEFQ YEFQVKPKNPLGEGPV K P N P K N 0 0 1 0 0 1 1 0 0 0 0 2 0 1 2 1 1 0 1 1 0 0 12 1 1436.73 H0Y897;D3YTG3;Q7Z7G0 H0Y897 959 970 ABI3BP Target of Nesh-SH3 yes no 3 0.01754 40.025 By MS/MS By matching By matching 1 1 1 1626000 509710 581180 535150 2114 477 2252 6692;6693;6694 4699 4699 620;3033;3659 0 PPQWSSNTSFTGK P P G K 0 0 1 0 0 1 0 1 0 0 0 1 0 1 2 3 2 1 0 0 0 0 13 0 1435.6732 REV__H3BV89 yes yes 2 0.011779 42.802 By matching By matching By MS/MS 1 1 1 2016700 304640 865760 846310 + 2115 1997 2253 6695;6696;6697 4700 4700 2850;3565 1 PQAVGSSNYASTSAGLK ERSVFMPRPQAVGSSN ASTSAGLKYPGSGADL R P Q L K Y 3 0 1 0 0 1 0 2 0 0 1 1 0 0 1 4 1 0 1 1 0 0 17 0 1636.8057 Q15018 Q15018 334 350 FAM175B BRISC complex subunit Abro1 yes yes 2 0.00092125 76.759 By matching By MS/MS By MS/MS 1 1 1 3044900 1100100 1109100 835660 2116 1427 2254 6698;6699;6700 4701;4702 4701 1911;3845 2 PQGSSSQAVATVASR LLLVVNGKPQGSSSQA AVATVASRPQCE____ K P Q S R P 3 1 0 0 0 2 0 1 0 0 0 0 0 0 1 4 1 0 0 2 0 0 15 0 1444.727 Q8N0Z6 Q8N0Z6 422 436 TTC5 Tetratricopeptide repeat protein 5 yes yes 2 0.018296 45.077 By MS/MS 1 0 0 0 0 2117 1621 2255 6701 4703 4703 2221;3453 1 PRASSSDMGSTAKK ESEARSKRPRASSSDM DMGSTAKKPRKCSLCH R P R K K P 2 1 0 1 0 0 0 1 0 0 0 2 1 0 1 4 1 0 0 0 0 0 14 2 1421.6933 K7EJ41;Q13472 K7EJ41 18 31 TOP3A DNA topoisomerase 3-alpha yes no 2 0.013229 45.864 By matching By MS/MS By matching 1 1 1 1428700 506530 532580 389610 2118 932 2256 6702;6703;6704 4704 4704 1241;3223 0 PRPGVTEATITGLEPGTEYTIYVIALK PPREVVPRPRPGVTEA TIYVIALKNNQKSEPL R P R L K N 2 1 0 0 0 0 3 3 0 3 2 1 0 0 3 0 5 0 2 2 0 0 27 1 2888.5535 P02751;H0Y7Z1;H0Y4K8 P02751 1951 1977 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 3.2327E-79 142.41 By MS/MS By MS/MS By MS/MS 1 1 1 69089000 31537000 17125000 20427000 2119 1095 2257 6705;6706;6707 4705;4706;4707 4707 3 PSAQLLSLLAMSPEK YTIPTVTKPSAQLLSL LLAMSPEKRKLAAQEG K P S E K R 2 0 0 0 0 1 1 0 0 0 4 1 1 0 2 3 0 0 0 0 0 0 15 0 1583.8593 B9A063;Q6PIF6 B9A063 424 438 MYO7B Unconventional myosin-VIIb yes no 2 0.016243 46.706 By MS/MS By matching By matching 1 1 1 1426200 599320 412990 413900 2120 390 2258 6708;6709;6710 4708 4708 513;514 1 PSGQISDPSR STGTQVTRPSGQISDP GQISDPSRSYFVVVNH R P S S R S 0 1 0 1 0 1 0 1 0 1 0 0 0 0 2 3 0 0 0 0 0 0 10 0 1042.5043 Q14207 Q14207 160 169 NPAT Protein NPAT yes yes 2 0.011603 50.46 By MS/MS 1 0 0 0 0 2121 1407 2259 6711 4709 4709 1874;1875 1 PSMSPTPLDR SRMSCFSRPSMSPTPL MSPTPLDRCRSPGMLE R P S D R C 0 1 0 1 0 0 0 0 0 0 1 0 1 0 3 2 1 0 0 0 0 0 10 0 1099.5332 Q9UQ35 Q9UQ35 2120 2129 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0050917 67.879 By matching By MS/MS By matching 1 1 1 2574100 728480 1030200 815350 2122 1945 2260 6712;6713;6714 4710 4710 2760 1 PSSSPVIFAGGQDR VTIPYRPKPSSSPVIF IFAGGQDRYSTGSDSA K P S D R Y 1 1 0 1 0 1 0 2 0 1 0 0 0 1 2 3 0 0 0 1 0 0 14 0 1416.6997 Q15366;H3BSS4 Q15366 186 199 PCBP2 Poly(rC)-binding protein 2 yes no 2 1.3873E-08 109.35 By MS/MS By MS/MS By MS/MS 1 1 1 8626500 3195800 3413200 2017500 2123 1438 2261 6715;6716;6717 4711;4712;4713 4711 1928;1929 3 PTMPATPNFLANPSSSSR LLPLPNPRPTMPATPN ANPSSSSRWIPLQPMP R P T S R W 2 1 2 0 0 0 0 0 0 0 1 0 1 1 4 4 2 0 0 0 0 0 18 0 1873.8992 E7EUE0;K7ER25;K7EJY1;Q7Z3S7 E7EUE0 16 33 CACNA2D4 Voltage-dependent calcium channel subunit alpha-2/delta-4;Voltage-dependent calcium channel subunit alpha-2-4;Voltage-dependent calcium channel subunit delta-4 yes no 3 0.017145 41.871 By MS/MS 1 0 0 0 0 2124 548 2262 6718 4714 4714 719;3071 1 PTPVVSTPSKVTAAAMAGNKSTPR DPPTANIKPTPVVSTP AGNKSTPRASIRPMVT K P T P R A 4 1 1 0 0 0 0 1 0 0 0 2 1 0 4 3 4 0 0 3 0 0 24 2 2367.258 P12270 P12270 1671 1694 TPR Nucleoprotein TPR yes yes 3 0.010958 48.354 By MS/MS By matching By matching 1 1 1 2121400 646890 816720 657770 2125 1151 2263 6719;6720;6721 4715 4715 1500;3292;3293;3294 0 PTSSPAKGPPQK LGNILQAKPTSSPAKG PAKGPPQKAGPVAVQV K P T Q K A 1 0 0 0 0 1 0 1 0 0 0 2 0 0 4 2 1 0 0 0 0 0 12 1 1193.6404 J3KQ96;E7ETY2;Q13428 J3KQ96 580 591 TCOF1 Treacle protein yes no 2;3 0.0014687 79.036 By MS/MS By MS/MS By MS/MS 1 2 2 18969000 2667000 13898000 2404000 2126 545 2264 6722;6723;6724;6725;6726 4716;4717;4718;4719 4716 712;713;3068 4 PTYTPPSIMPQK VPGAGLRRPTYTPPSI PPSIMPQKHWVYVKRG R P T Q K H 0 0 0 0 0 1 0 0 0 1 0 1 1 0 4 1 2 0 1 0 0 0 12 0 1358.6904 O15209 O15209 284 295 ZBTB22 Zinc finger and BTB domain-containing protein 22 yes yes 2 0.016264 42.718 By MS/MS 1 0 0 0 0 2127 992 2265 6727 4720 4720 3236;3747 1 PVAMTTAQRDSLLWK MFGSAPQRPVAMTTAQ QRDSLLWKLAGLLRES R P V W K L 2 1 0 1 0 1 0 0 0 0 2 1 1 0 1 1 2 1 0 1 0 0 15 1 1715.9029 Q8N1F8 Q8N1F8 9 23 STK11IP Serine/threonine-protein kinase 11-interacting protein yes yes 2 0.0085485 51.939 By MS/MS 1 0 0 0 0 2128 1623 2266 6728 4721 4721 3454 1 PVDIVFLLDGSER SVAQCTQRPVDIVFLL FLLDGSERLGEQNFHK R P V E R L 0 1 0 2 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 2 0 0 13 0 1458.7718 P12110 P12110 831 843 COL6A2 Collagen alpha-2(VI) chain yes yes 2 1.0846E-20 141.08 By MS/MS By MS/MS By MS/MS 1 1 1 20318000 9510300 4081600 6726400 2129 1150 2267 6729;6730;6731 4722;4723;4724 4724 3 PVPDSPVSVTRL TFALQHPRPVPDSPVS SPVSVTRL________ R P V R L - 0 1 0 1 0 0 0 0 0 0 1 0 0 0 3 2 1 0 0 3 0 0 12 1 1265.698 G3XAC1;A0A0C4DFT5;Q9BXS9 G3XAC1 640 651 SLC26A6 Solute carrier family 26 member 6 yes no 2 0.012294 61.375 By MS/MS By matching By MS/MS 1 1 1 1789300 502090 643090 644120 2130 181 2268 6732;6733;6734 4725;4726 4726 251 2 PVSSAASVYAGAGGSGSR QAPSYGARPVSSAASV GAGGSGSRISVSRSTS R P V S R I 4 1 0 0 0 0 0 4 0 0 0 0 0 0 1 5 0 0 1 2 0 0 18 0 1579.759 F8VZY9;P05783 F8VZY9 28 45 KRT18 Keratin, type I cytoskeletal 18 yes no 2;3 0.0018055 69.714 By MS/MS By MS/MS By matching 2 2 2 7570000 4577800 1677000 1315200 2131 683 2269 6735;6736;6737;6738;6739;6740 4727;4728;4729 4728 3 PVTVVQSIGTEVIGTLRPDYR KWQLKRDKPVTVVQSI GTLRPDYRDRIRLFEN K P V Y R D 0 2 0 1 0 1 1 2 0 2 1 0 0 0 2 1 3 0 1 4 0 0 21 1 2299.2536 Q14CZ8 Q14CZ8 76 96 HEPACAM Hepatocyte cell adhesion molecule yes yes 3 0.00087583 53.188 By matching By MS/MS 1 1 627390 299710 0 327680 2132 1425 2270 6741;6742 4730 4730 135 1909;3377;3378;3379 1 PYQYPALTPEQK ________________ PALTPEQKKELSDIAH M P Y Q K K 1 0 0 0 0 2 1 0 0 0 1 1 0 0 3 0 1 0 2 0 0 0 12 0 1433.7191 J3KPS3;P04075;H3BUH7;H3BQN4;H3BMQ8;H3BR04 J3KPS3 2 13 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.00048357 73.985 By MS/MS By MS/MS 1 1 1747500 0 1178500 568990 2133 908 2271 6743;6744 4731;4732 4732 1 PYTCQQCGKGFSQASHFHTHQR QRVHTGEKPYTCQQCG SHFHTHQRVHTGERPY K P Y Q R V 1 1 0 0 2 4 0 2 3 0 0 1 0 2 1 2 2 0 1 0 0 0 22 1 2661.1714 Q14590 Q14590 682 703 ZNF235 Zinc finger protein 235 yes yes 3 0.018095 40.952 By MS/MS By matching 1 1 1654700 737520 917220 0 2134 1413 2272 6745;6746 4733 4733 1882;3372 0 QADSEMTGYVVTR ILDFGLARQADSEMTG MTGYVVTRWYRAPEVI R Q A T R W 1 1 0 1 0 1 1 1 0 0 0 0 1 0 0 1 2 0 1 2 0 0 13 0 1455.6664 B5MDL5;P53778 B5MDL5 87 99 MAPK12 Mitogen-activated protein kinase 12 yes no 2 1.3995E-47 158.56 By MS/MS By MS/MS By MS/MS 2 2 2 9482000 3011900 3427500 3042600 2135 368 2273;2274 6747;6748;6749;6750;6751;6752 4734;4735;4736;4737;4738;4739 4734 3004;3634 6 QAESDMSK PRPWSYPRQAESDMSK QAESDMSKPPCYEEAV R Q A S K P 1 0 0 1 0 1 1 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 8 0 894.3753 D6RFJ4;Q8TB68 D6RFJ4 142 149 PRR7 Proline-rich protein 7 yes no 2 0.010967 62.823 By MS/MS 1 0 0 0 0 2136 495 2275 6753 4740 4740 637 1 QAFYYSYK TNSRICYKQAFYYSYK QAFYYSYKIYAGNNMH K Q A Y K I 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 3 0 0 0 8 0 1068.4916 V9GYX4 V9GYX4 386 393 CTCFL yes yes 2 0.011136 60.478 By MS/MS 1 0 0 0 0 2137 2013 2276 6754 4741 4741 3946 1 QALDSEEEEEDVAAK GRPQALSRQALDSEEE EEEDVAAKETLLRLSS R Q A A K E 3 0 0 2 0 1 5 0 0 0 1 1 0 0 0 1 0 0 0 1 0 0 15 0 1661.7268 H7C3D5;Q8NC44 H7C3D5 76 90 FAM134A Protein FAM134A yes no 2 0.00044291 81.525 By matching By MS/MS By MS/MS 1 1 1 14424000 5535100 4645800 4243100 2138 869 2277 6755;6756;6757 4742;4743 4743 1167 2 QALDSEEEEEDVAAKETLLR GRPQALSRQALDSEEE AAKETLLRLSSPLHFV R Q A L R L 3 1 0 2 0 1 6 0 0 0 3 1 0 0 0 1 1 0 0 1 0 0 20 1 2274.0863 H7C3D5;Q8NC44 H7C3D5 76 95 FAM134A Protein FAM134A yes no 3 0.013 44.468 By MS/MS By matching By matching 1 1 1 3089500 1412400 803430 873710 2139 869 2278 6758;6759;6760 4744 4744 1167 1 QALGSPLAGISTR TPGPELGRQALGSPLA PLAGISTRLPGPGEPV R Q A T R L 2 1 0 0 0 1 0 2 0 1 2 0 0 0 1 2 1 0 0 0 0 0 13 0 1269.7041 O14686 O14686 2848 2860 KMT2D Histone-lysine N-methyltransferase 2D yes yes 2 0.011224 52.265 By MS/MS 1 0 0 0 0 2140 983 2279 6761 4745 4745 1313;1314 1 QALSDLMIKPVQR SMRENKEKQALSDLMI LMIKPVQRIPRYELLV K Q A Q R I 1 1 0 1 0 2 0 0 0 1 2 1 1 0 1 1 0 0 0 1 0 0 13 1 1497.8337 Q96PE2 Q96PE2 1200 1212 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes yes 2;3 0.0004077 77.379 By MS/MS By MS/MS By MS/MS 1 1 2 17271000 3884500 4993700 8393000 2141 1752 2280 6762;6763;6764;6765 4746;4747;4748;4749 4746 140;141 162 4 QAPGKRSESGSPSAGGHSK DVVSVEKRQAPGKRSE PSAGGHSKPPHSPLVL R Q A S K P 2 1 0 0 0 1 1 4 1 0 0 2 0 0 2 5 0 0 0 0 0 0 19 2 1823.8874 H0YBT0;A0A087WUS5;P01106 H0YBT0 285 303 MYC Myc proto-oncogene protein yes no 3 0.0151 42.818 By MS/MS 1 380880 380880 0 0 2142 40 2281 6766 4750 4750 45 1 QAQAQESEEEEESR LDLEARERQAQAQESE SEEEEESRSTRTLEQE R Q A S R S 2 1 0 0 0 3 6 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 14 0 1648.6813 H0YLQ7;Q9NVM6 H0YLQ7 106 119 DNAJC17 DnaJ homolog subfamily C member 17 yes no 2 0.0044564 62.287 By MS/MS By MS/MS By matching 1 1 1 1697300 813650 653340 230330 2143 803 2282 6767;6768;6769 4751;4752 4752 1092 2 QASEQNWANYSAEQNR SSCRNYNKQASEQNWA NYSAEQNRMGQAGSTI K Q A N R M 3 1 3 0 0 3 2 0 0 0 0 0 0 0 0 2 0 1 1 0 0 0 16 0 1894.8194 P17302 P17302 304 319 GJA1 Gap junction alpha-1 protein yes yes 2 0.0050332 54.7 By matching By MS/MS By matching 1 1 1 5102900 1920900 1621500 1560400 2144 1165 2283 6770;6771;6772 4753 4753 3770 1 QASLDGLQQLR GGGGRLLRQASLDGLQ LDGLQQLRDNMGSRRD R Q A L R D 1 1 0 1 0 3 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 11 0 1227.6571 Q3MII6 Q3MII6 504 514 TBC1D25 TBC1 domain family member 25 yes yes 2 0.0022077 77.597 By MS/MS By MS/MS By MS/MS 1 1 1 5958300 2220900 1597400 2140000 2145 1467 2284 6773;6774;6775 4754;4755;4756 4754 1967 3 QASLPVSGSVAGDFVK RARPPVQKQASLPVSG SVAGDFVKKATSCRGL K Q A V K K 2 0 0 1 0 1 0 2 0 0 1 1 0 1 1 3 0 0 0 3 0 0 16 0 1560.8148 E9PCD1;H0Y7J9;H0Y493;H0Y7R3;F8W9F9;H0Y7T5;Q9Y3S1 E9PCD1 187 202 WNK2 Serine/threonine-protein kinase WNK2 yes no 2 0.0013697 70.41 By MS/MS By MS/MS By matching 1 1 1 4351200 1737500 1386300 1227400 2146 564 2285 6776;6777;6778 4757;4758 4757 750 2 QASPTEVVER FNRTPGSRQASPTEVV SPTEVVERLGPNTNPS R Q A E R L 1 1 0 0 0 1 2 0 0 0 0 0 0 0 1 1 1 0 0 2 0 0 10 0 1114.5619 C9JW01;A0A0C4DG68;A0A0A0MR59;Q8TB72 C9JW01 180 189 PUM2 Pumilio homolog 2 yes no 2 0.00011153 121.21 By MS/MS By matching By matching 1 1 1 9295200 3096600 3323200 2875400 2147 127 2286 6779;6780;6781 4759 4759 169 1 QASTDAGTAGALTPQHVR PEPKSHSRQASTDAGT ALTPQHVRAHSSPASL R Q A V R A 4 1 0 1 0 2 0 2 1 0 1 0 0 0 1 1 3 0 0 1 0 0 18 0 1779.8864 P46937 P46937 107 124 YAP1 Transcriptional coactivator YAP1 yes yes 2 0.0091784 49.448 By MS/MS By MS/MS By matching 1 1 1 7241900 2408400 2767200 2066300 2148 1246 2287 6782;6783;6784 4760;4761 4760 1630;3320 2 QASTQVPR PAHISSVRQASTQVPR QASTQVPRTVPHTQRV R Q A P R T 1 1 0 0 0 2 0 0 0 0 0 0 0 0 1 1 1 0 0 1 0 0 8 0 885.46683 Q4VXT6;Q4VXT4;Q4VXT5;F2Z2Z0;Q4VXU2 Q4VXT6 20 27 PABPC1L Polyadenylate-binding protein 1-like yes no 2 0.018593 43.246 By MS/MS 1 0 0 0 0 2149 628 2288 6785 4762 4762 850;3107 1 QATPGVPAQQSPSM GAMYTLPRQATPGVPA PAQQSPSM________ R Q A S M - 2 0 0 0 0 3 0 1 0 0 0 0 1 0 3 2 1 0 0 1 0 0 14 0 1397.6609 O60341 O60341 839 852 KDM1A Lysine-specific histone demethylase 1A yes yes 2 0.0061985 57.53 By MS/MS By MS/MS By MS/MS 1 1 1 2911700 814280 875740 1221600 2150 1020 2289 6786;6787;6788 4763;4764;4765 4763 1364;1365 3 QAVGGAGPPNPAINGSAPR VQNLDKARQAVGGAGP AINGSAPRDLFDMKPF R Q A P R D 4 1 2 0 0 1 0 4 0 1 0 0 0 0 4 1 0 0 0 1 0 0 19 0 1729.886 P29353;H0Y539;X6R6D0 P29353 438 456 SHC1 SHC-transforming protein 1 yes no 2 0.0072469 51.487 By matching By MS/MS By matching 1 1 1 1844400 519980 724630 599770 2151 1204 2290 6789;6790;6791 4766 4766 1555 1 QAYEPPPPPAYR HASRRPDRQAYEPPPP PPPPPAYRTGSLKPNP R Q A Y R T 2 1 0 0 0 1 1 0 0 0 0 0 0 0 5 0 0 0 2 0 0 0 12 0 1384.6776 A0A0D9SFS2;Q15654 A0A0D9SFS2 72 83 TRIP6 Thyroid receptor-interacting protein 6 yes no 2 0.003433 72.243 By MS/MS By MS/MS By matching 1 1 1 3024100 1133600 1034300 856220 2152 216 2291 6792;6793;6794 4767;4768 4768 3599 2 QCHALQEDMQTRSK AIYAEMSRQCHALQED EDMQTRSKQLEEEVKG R Q C S K Q 1 1 0 1 1 3 1 0 1 0 1 1 1 0 0 1 1 0 0 0 0 0 14 1 1730.7828 Q494R4 Q494R4 90 103 CCDC153 Coiled-coil domain-containing protein 153 yes yes 3 0.0081035 42.797 By matching By MS/MS By matching 1 1 1 9102200 2907400 4253500 1941300 2153 1470 2292 6795;6796;6797 4769 4769 3393 1 QDCCYDNRENPISSWNVK QRASQCLKQDCCYDNR PISSWNVKRARDIHLT K Q D V K R 0 1 3 2 2 1 1 0 0 1 0 1 0 0 1 2 0 1 1 1 0 0 18 1 2283.9637 Q15646 Q15646 332 349 OASL 2-5-oligoadenylate synthase-like protein yes yes 3 0.017706 40.693 By MS/MS 1 0 0 0 0 2154 1446 2293 6798 4770 4770 1936;1937;3851 1 QDPVTYISETDEEDDFMCKK SKPGKISRQDPVTYIS EDDFMCKKAASKSKEN R Q D K K A 0 0 0 4 1 1 3 0 0 1 0 2 1 1 1 1 2 0 1 1 0 0 20 1 2449.0301 P35251;D6RAD2 P35251 101 120 RFC1 Replication factor C subunit 1 yes no 3 0.003166 44.831 By MS/MS By matching By matching 1 1 1 4357900 2192800 956410 1208800 2155 1218 2294 6799;6800;6801 4771 4771 113 1569 1 QDVYGPQPQVR EGYRAPSRQDVYGPQP YGPQPQVRVGGSSVDL R Q D V R V 0 1 0 1 0 3 0 1 0 0 0 0 0 0 2 0 0 0 1 2 0 0 11 0 1285.6415 C9JZR2;O60716;E9PRE2 C9JZR2 254 264 CTNND1 Catenin delta-1 yes no 2;3 2.9417E-07 135.71 By MS/MS By MS/MS By MS/MS 2 2 2 58687000 19410000 20927000 18350000 2156 459 2295 6802;6803;6804;6805;6806;6807 4772;4773;4774;4775 4775 3654 4 QEAQEIIPMKSLHR SRIGSLQKQEAQEIIP IPMKSLHRGRKAFSFG K Q E H R G 1 1 0 0 0 2 2 0 1 2 1 1 1 0 1 1 0 0 0 0 0 0 14 1 1678.8825 Q6AI14 Q6AI14 705 718 SLC9A4 Sodium/hydrogen exchanger 4 yes yes 3 0.017983 41.401 By MS/MS 1 0 0 0 0 2157 1531 2296 6808 4776 4776 2083 1 QEDGGVYSSSGLK ISDFGMSRQEDGGVYS VYSSSGLKQIPIKWTA R Q E L K Q 0 0 0 1 0 1 1 3 0 0 1 1 0 0 0 3 0 0 1 1 0 0 13 0 1325.6099 W0S4B9;P16591 W0S4B9 297 309 Pe1Fe10;FER Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Fer yes no 2 0.008971 58.511 By MS/MS By MS/MS By matching 1 1 1 3534300 1348700 1194400 991190 2158 1163 2297 6809;6810;6811 4777;4778 4777 3769 2 QEKPAEKPAETPVATSPTATDSTSGDSSR PAPASAAKQEKPAEKP STSGDSSRSNLFEDAT K Q E S R S 4 1 0 2 0 1 3 1 0 0 0 2 0 0 4 5 5 0 0 1 0 0 29 2 2944.3898 H0Y579;P54727 H0Y579 15 43 RAD23B UV excision repair protein RAD23 homolog B yes no 3;4 0.0046499 44.336 By matching By MS/MS By MS/MS 2 2 2 159850000 84405000 50777000 24672000 2159 758 2298 6812;6813;6814;6815;6816;6817 4779;4780 4780 1038;3162 2 QELAEPDEESDSSSAR Q E A R 2 1 0 2 0 1 4 0 0 0 1 0 0 0 1 4 0 0 0 0 0 0 16 0 1748.7337 REV__H0YH26 yes no 2 0.01049 48.405 By matching By matching By MS/MS 1 1 1 48757000 15779000 19420000 13558000 + 2160 1994 2299 6818;6819;6820 4781 4781 2846;2847;2848 1 QEMQEVQSSR EVRKALSRQEMQEVQS MQEVQSSRSGRGGNFG R Q E S R S 0 1 0 0 0 3 2 0 0 0 0 0 1 0 0 2 0 0 0 1 0 0 10 0 1220.5455 P22626 P22626 191 200 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2 0.014081 82.287 By matching By MS/MS By matching 1 1 1 2533300 835930 1047200 650220 2161 1188 2300 6821;6822;6823 4782 4782 1 QEPSQGTTTFAVTSILR KYLTWASRQEPSQGTT FAVTSILRVAAEDWKK R Q E L R V 1 1 0 0 0 2 1 1 0 1 1 0 0 1 1 2 4 0 0 1 0 0 17 0 1834.9425 P01876;A0A0G2JMB2 P01876 283 299 IGHA1 Ig alpha-1 chain C region yes no 2 0.018046 48.112 By MS/MS By matching 1 1 2009400 0 1122700 886690 2162 1091 2301 6824;6825 4783 4783 1 QEQINTEPLEDTVLSPTK EPEDKTVKQEQINTEP DTVLSPTKKRKRQKGT K Q E T K K 0 0 1 1 0 2 3 0 0 1 2 1 0 0 2 1 3 0 0 1 0 0 18 0 2041.0215 O15446 O15446 271 288 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 2 1.6364E-07 101.5 By matching By MS/MS By matching 1 1 1 10539000 4143200 3290100 3106100 2163 998 2302 6826;6827;6828 4784 4784 1330 0 QERLSPEVAPPAHR LPAGVVVKQERLSPEV EVAPPAHRRPDHSGGS K Q E H R R 2 2 0 0 0 1 2 0 1 0 1 0 0 0 3 1 0 0 0 1 0 0 14 1 1585.8325 Q8TAD8 Q8TAD8 31 44 SNIP1 Smad nuclear-interacting protein 1 yes yes 3 6.3247E-06 102.38 By MS/MS By MS/MS By MS/MS 1 1 1 15072000 5875000 5023900 4173000 2164 1665 2303 6829;6830;6831 4785;4786;4787 4786 2284 3 QESDPEDDDVKKPALQSSVVATSK RRTRRESRQESDPEDD SSVVATSKERTRRDLI R Q E S K E 2 0 0 4 0 2 2 0 0 0 1 3 0 0 2 4 1 0 0 3 0 0 24 2 2572.2504 Q9H307 Q9H307 98 121 PNN Pinin yes yes 4 0.0043112 48.224 By matching By MS/MS By matching 1 1 1 6394300 2677800 1926300 1790200 2165 1819 2304 6832;6833;6834 4788 4788 2552 1 QEVAPVQYNIVEQNK WKPLGQQKQEVAPVQY YNIVEQNKLNKDYRAN K Q E N K L 1 0 2 0 0 3 2 0 0 1 0 1 0 0 1 0 0 0 1 3 0 0 15 0 1757.8948 A0A087WZ85;A0A0A0MSX4;A0A087WTM1;Q9Y6N7 A0A087WZ85 981 995 ROBO1 Roundabout homolog 1 yes no 2 0.00018381 83.081 By MS/MS By matching By MS/MS 1 1 1 5458900 1813200 2063600 1582100 2166 24 2305 6835;6836;6837 4789;4790 4790 3572 2 QEYDESGPSIVHR FQQMWISKQEYDESGP SGPSIVHRKCF_____ K Q E H R K 0 1 0 1 0 1 2 1 1 1 0 0 0 0 1 2 0 0 1 1 0 0 13 0 1515.6954 P63261;P60709;Q6S8J3;A5A3E0;Q9BYX7;P0CG39;P0CG38 P63261 360 372 ACTG1;ACTB;POTEE;POTEF;POTEKP;POTEJ;POTEI Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member J;POTE ankyrin domain family member I yes no 2;3 4.2009E-05 94.122 By MS/MS By MS/MS By matching 2 2 2 7168100 2834300 3094200 1239600 2167 1305 2306 6838;6839;6840;6841;6842;6843 4791;4792;4793 4791 3 QFQEAIIVFQEEFK SATGESEKQFQEAIIV IVFQEEFKCCGLVNGA K Q F F K C 1 0 0 0 0 3 3 0 0 2 0 1 0 3 0 0 0 0 0 1 0 0 14 0 1754.8879 P19075 P19075 137 150 TSPAN8 Tetraspanin-8 yes yes 2;3 7.464E-250 195.71 By MS/MS By MS/MS By MS/MS 1 1 2 14328000 6631700 3442900 4253300 2168 1173 2307 6844;6845;6846;6847 4794;4795;4796;4797;4798 4798 5 QFSTASDHEQPGVSG KDQKKVERQFSTASDH HEQPGVSG________ R Q F S G - 1 0 0 1 0 2 1 2 1 0 0 0 0 1 1 3 1 0 0 1 0 0 15 0 1545.6696 G3V133;Q66K14 G3V133 395 409 TBC1D9B TBC1 domain family member 9B yes no 2 0.0079347 51.939 By MS/MS By matching By matching 1 1 1 11480000 3918100 3967600 3594200 2169 707 2308 6848;6849;6850 4799 4799 952 1 QGQGQSEPGEYEQRLSLQDR RTLIFRVRQGQGQSEP QRLSLQDRGATLALTQ R Q G D R G 0 2 0 1 0 5 3 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 20 1 2304.0731 P43121 P43121 78 97 MCAM Cell surface glycoprotein MUC18 yes yes 3 0.0063916 41.554 By matching By matching By MS/MS 1 1 1 22915000 7588800 9247100 6078900 2170 1239 2309 6851;6852;6853 4800 4800 1600;1601 1 QGQIEVSILSR KNHPSYARQGQIEVSI IEVSILSRLSSENADE R Q G S R L 0 1 0 0 0 2 1 1 0 2 1 0 0 0 0 2 0 0 0 1 0 0 11 0 1228.6776 Q5SQL3;J3KP92;Q86Z02 Q5SQL3 230 240 HIPK1 Homeodomain-interacting protein kinase 1 yes no 2 0.014133 47.712 By MS/MS 1 0 0 0 0 2171 904 2310 6854 4801 4801 1213 1 QGQSQAASSSSVTSPIK AQVEQQHKQGQSQAAS SSVTSPIKMKIPIANT K Q G I K M 2 0 0 0 0 3 0 1 0 1 0 1 0 0 1 6 1 0 0 1 0 0 17 0 1661.822 O60583 O60583 467 483 CCNT2 Cyclin-T2 yes yes 2 0.0017683 64.827 By MS/MS By MS/MS By matching 1 1 1 6921900 2606500 2286300 2029200 2172 1023 2311 6855;6856;6857 4802;4803 4803 1370;3246 2 QGSFRGFPALSQKNSPFK APLEQLVRQGSFRGFP SQKNSPFKRQLSLRLN R Q G F K R 1 1 1 0 0 2 0 2 0 0 1 2 0 3 2 3 0 0 0 0 0 0 18 2 1995.0326 A0A0C4DGH3;Q9Y6R0 A0A0C4DGH3 262 279 NUMBL Numb-like protein yes no 3 0.00527 50.608 By MS/MS 1 2040700 0 0 2040700 2173 199 2312 6858 4804 4804 13 276;277 1 QGSPVAAGAPAK FGSRGQPRQGSPVAAG VAAGAPAKQQQVDIPL R Q G A K Q 4 0 0 0 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 1 0 0 12 0 1052.5615 Q9NZI8 Q9NZI8 179 190 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 2 1.1145E-112 182.25 By MS/MS By MS/MS By MS/MS 1 1 1 112740000 43201000 38307000 31230000 2174 1883 2313 6859;6860;6861 4805;4806;4807;4808;4809;4810;4811;4812;4813;4814;4815;4816 4807 2656 12 QGSPVAAGAPAKQQQVDIPLR FGSRGQPRQGSPVAAG QQVDIPLRLLVPTQYV R Q G L R L 4 1 0 1 0 4 0 2 0 1 1 1 0 0 3 1 0 0 0 2 0 0 21 1 2130.1546 Q9NZI8 Q9NZI8 179 199 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 yes yes 3 0.00029552 75.55 By MS/MS By MS/MS By MS/MS 1 1 1 86789000 28261000 20520000 38008000 2175 1883 2314 6862;6863;6864 4817;4818;4819 4819 2656 3 QGVDIEAARK LLQNEVNRQGVDIEAA VDIEAARKEEERIMLR R Q G R K E 2 1 0 1 0 1 1 1 0 1 0 1 0 0 0 0 0 0 0 1 0 0 10 1 1085.5829 O14974;F8VZN8;F8VW28;H0YHL8 O14974 162 171 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.010813 57.96 By MS/MS 1 694850 0 694850 0 2176 986 2315 6865 4820 4820 1 QHASSLEDTKSSLDCPAR RKGSSLERQHASSLED SSLDCPARTSLEWQRQ R Q H A R T 2 1 0 2 1 1 1 0 1 0 2 1 0 0 1 4 1 0 0 0 0 0 18 1 2000.9222 H7C4J7 H7C4J7 81 98 ROBO2 yes yes 2 0.0083432 51.774 By MS/MS 1 1498600 0 0 1498600 2177 875 2316 6866 4821 4821 1174;1175;3195 0 QHVVSVEEALLATGQWK LSLTVQGKQHVVSVEE LLATGQWKSITLFVQE K Q H W K S 2 0 0 0 0 2 2 1 1 0 2 1 0 0 0 1 1 1 0 3 0 0 17 0 1893.9949 P07996;CON__Q28194 P07996 138 154 THBS1 Thrombospondin-1 yes no 3 0.0057101 44.598 By MS/MS 1 327630 327630 0 0 + 2178 1124 2317 6867 4822;4823;4824 4823 3 QILIACSPVSSVR ILRVTRRRQILIACSP CSPVSSVRKKPKVTPT R Q I V R K 1 1 0 0 1 1 0 0 0 2 1 0 0 0 1 3 0 0 0 2 0 0 13 0 1428.7759 J3KP30;Q5QJE6;E9PRB3 J3KP30 111 123 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 1.2227E-07 107.37 By MS/MS By MS/MS By MS/MS 1 1 1 17470000 7304300 5839400 4326300 2179 902 2318 6868;6869;6870 4825;4826;4827 4826 1210;1211 3 QIQTSPVPVR DKGGKDKKQIQTSPVP QTSPVPVRKNSRDEEK K Q I V R K 0 1 0 0 0 2 0 0 0 1 0 0 0 0 2 1 1 0 0 2 0 0 10 0 1123.635 Q9NRM7 Q9NRM7 572 581 LATS2 Serine/threonine-protein kinase LATS2 yes yes 2 0.0078855 64.42 By MS/MS By matching 1 1 868020 481400 0 386620 2180 1852 2319 6871;6872 4828 4828 2606 1 QISQDVKLEPDILLR ERRQRLERQISQDVKL LEPDILLRAKQD____ R Q I L R A 0 1 0 2 0 2 1 0 0 2 3 1 0 0 1 1 0 0 0 1 0 0 15 1 1765.9938 E9PJF6;H0YCL9;H0Y360;Q01433;E9PIJ1 E9PJF6 85 99 AMPD2 AMP deaminase 2 yes no 2 0.013382 52.555 By matching By MS/MS By matching 1 1 1 7131400 3969500 1431600 1730300 2181 593 2320 6873;6874;6875 4829 4829 787 1 QITTSPITVR DSGDKEKKQITTSPIT TTSPITVRKNKKDEER K Q I V R K 0 1 0 0 0 1 0 0 0 2 0 0 0 0 1 1 3 0 0 1 0 0 10 0 1114.6346 O95835 O95835 609 618 LATS1 Serine/threonine-protein kinase LATS1 yes yes 2 0.0052226 67.214 By MS/MS By matching 1 1 7318800 0 4077400 3241400 2182 1075 2321 6876;6877 4830 4830 1446 1 QITVNDLPVGR IDDKGILRQITVNDLP VNDLPVGRSVDETLRL R Q I G R S 0 1 1 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 2 0 0 11 0 1210.667 A0A0A0MSI0;Q06830;A0A0A0MRQ5;P32119 A0A0A0MSI0 141 151 PRDX1;PRDX2 Peroxiredoxin-1;Peroxiredoxin-2 no no 2 7.8637E-07 134.26 By MS/MS By MS/MS By matching 1 1 1 4346700 1073500 3049200 224070 2183 150;1213 2322 6878;6879;6880 4831;4832 4832 2 QIVGTPVNSEDSDTR KIVPGNEKQIVGTPVN NSEDSDTRQTSHLQAR K Q I T R Q 0 1 1 2 0 1 1 1 0 1 0 0 0 0 1 2 2 0 0 2 0 0 15 0 1616.7642 J3KP30;Q5QJE6 J3KP30 228 242 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 2 0.004672 77.222 By matching By matching By MS/MS 1 1 1 3946100 1271600 1571800 1102700 2184 902 2323 6881;6882;6883 4833 4833 3210 1 QIYLSENPEETAAR CTINNISKQIYLSENP NPEETAARVNQSALEA K Q I A R V 2 1 1 0 0 1 3 0 0 1 1 0 0 0 1 1 1 0 1 0 0 0 14 0 1619.7791 Q9UKG1 Q9UKG1 376 389 APPL1 DCC-interacting protein 13-alpha yes yes 2 0.015119 49.5 By matching By matching By MS/MS 1 1 1 2329100 896040 652420 780690 2185 1915 2324 6884;6885;6886 4834 4834 3929 1 QKDQYVQTPTKEEQLETDK Q K D K 0 0 0 2 0 4 3 0 0 0 1 3 0 0 1 0 3 0 1 1 0 0 19 2 2307.123 REV__H0Y2V6 yes no 3 0.0034888 57.973 By MS/MS By MS/MS 1 1 65337000 10461000 0 54876000 + 2186 1993 2325;2326 6887;6888 4835;4836 4835 3563;3564;3944 2 QKFNDSEGDDTEETEDYR FSDKESGKQKFNDSEG TEETEDYRQFRKSVLA K Q K Y R Q 0 1 1 4 0 1 4 1 0 0 0 1 0 1 0 1 2 0 1 0 0 0 18 1 2176.8669 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09 E9PK91 392 409 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0046621 54.368 By MS/MS By matching By matching 1 1 1 67666000 26208000 21785000 19673000 2187 596 2327 6889;6890;6891 4837 4837 795;3098 1 QKKAHLMEIQVNGGTVAEK QMRLLPLRQKKAHLME NGGTVAEKLDWARERL R Q K E K L 2 0 1 0 0 2 2 2 1 1 1 3 1 0 0 0 1 0 0 2 0 0 19 2 2080.1099 H7C3M2;B5MCW2;H7C422;G5E9G0;P39023 H7C3M2 207 225 RPL3 60S ribosomal protein L3 yes no 2 6.3762E-16 94.339 By MS/MS By MS/MS By MS/MS 4 1 2 2580400000 931010000 721000000 928440000 2188 364 2328;2329 6892;6893;6894;6895;6896;6897;6898 4838;4839;4840;4841;4842 4840 22;118;119 3003 4 QKSDAEEDGGTVSQEEEDR GEEKLEEKQKSDAEED VSQEEEDRKPKAEEDE K Q K D R K 1 1 0 3 0 2 5 2 0 0 0 1 0 0 0 2 1 0 0 1 0 0 19 1 2107.8778 P27824 P27824 552 570 CANX Calnexin yes yes 2;3 2.2919E-30 113.25 By MS/MS By MS/MS By matching 2 2 2 17634000 4335400 8798500 4500500 2189 1198 2330 6899;6900;6901;6902;6903;6904 4843;4844;4845 4844 1548 3 QKSDHGAYSQSPAIK GRKIRVLRQKSDHGAY YSQSPAIKKQLDRHLP R Q K I K K 2 0 0 1 0 2 0 1 1 1 0 2 0 0 1 3 0 0 1 0 0 0 15 1 1615.7954 Q9Y4B6 Q9Y4B6 977 991 VPRBP Protein VPRBP yes yes 3 0.011902 47.506 By MS/MS By matching 1 1 1539600 605770 933820 0 2190 1968 2331 6905;6906 4846 4846 2816 1 QKSPAQSDSTTQR GSESGRGRQKSPAQSD QSDSTTQRRTVGKKQP R Q K Q R R 1 1 0 1 0 3 0 0 0 0 0 1 0 0 1 3 2 0 0 0 0 0 13 1 1432.6906 Q9UHB7 Q9UHB7 547 559 AFF4 AF4/FMR2 family member 4 yes yes 2 0.018 55.04 By matching By matching By MS/MS 1 1 1 1873200 421100 867810 584310 2191 1905 2332 6907;6908;6909 4847 4847 2686 1 QKSYTLVVAK FIPPWLKKQKSYTLVV SYTLVVAKDGGDKKEP K Q K A K D 1 0 0 0 0 1 0 0 0 0 1 2 0 0 0 1 1 0 1 2 0 0 10 1 1135.6601 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 85 94 EPB41L2 Band 4.1-like protein 2 yes no 2 0.0010691 107.11 By MS/MS By MS/MS By MS/MS 1 1 1 26270000 9283000 9931600 7055700 2192 1012 2333 6910;6911;6912 4848;4849;4850 4848 1350;3752 3 QKYLDSFTPCWLNLK KAILTLVKQKYLDSFT TPCWLNLKNTPVGRGI K Q K L K N 0 0 1 1 1 1 0 0 0 0 3 2 0 1 1 1 1 1 1 0 0 0 15 1 1911.9553 Q9P2K2 Q9P2K2 655 669 TXNDC16 Thioredoxin domain-containing protein 16 yes yes 3 0.0059164 45.347 By MS/MS 1 5635600 0 0 5635600 2193 1896 2334 6913 4851 4851 3528 1 QLEEPGAGTPSPVR SGSGMPSRQLEEPGAG AGTPSPVRLHALAGFQ R Q L V R L 1 1 0 0 0 1 2 2 0 0 1 0 0 0 3 1 1 0 0 1 0 0 14 0 1436.726 Q63ZY6;Q96P11 Q63ZY6 133 146 NSUN5P2;NSUN5 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 2 3.7138E-07 105.14 By MS/MS By MS/MS By MS/MS 1 1 1 3789200 1265700 1329700 1193800 2194 1526 2335 6914;6915;6916 4852;4853;4854 4854 2077;3423 3 QLHLEGASLELSDDDTESK SSSRSGRRQLHLEGAS SDDDTESKTSDVNETQ R Q L S K T 1 0 0 3 0 1 3 1 1 0 4 1 0 0 0 3 1 0 0 0 0 0 19 0 2085.9702 P35580 P35580 1945 1963 MYH10 Myosin-10 yes yes 3 0.0066385 46.46 By MS/MS By matching By matching 1 1 1 13039000 4334800 3067000 5636800 2195 1222 2336 6917;6918;6919 4855 4855 1578 1 QLKDTLNRIPSLR KTQVAEYKQLKDTLNR LNRIPSLRKPDPAEQQ K Q L L R K 0 2 1 1 0 1 0 0 0 1 3 1 0 0 1 1 1 0 0 0 0 0 13 2 1552.9049 F8W785;O00461 F8W785 208 220 GOLIM4 Golgi integral membrane protein 4 yes no 2 0.016045 40.941 By matching By matching By MS/MS 1 1 1 5774900 1603200 2248200 1923500 2196 687 2337 6920;6921;6922 4856 4856 918;3133 0 QLLDSDEEQEEDEGR LKAAPKKRQLLDSDEE EQEEDEGRNRAPELGA R Q L G R N 0 1 0 3 0 2 5 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 15 0 1790.7442 Q9UNS1 Q9UNS1 1169 1183 TIMELESS Protein timeless homolog yes yes 2 0.005321 55.656 By matching By MS/MS By matching 1 1 1 26384000 8406100 9283800 8694000 2197 1937 2338 6923;6924;6925 4857 4857 2736 1 QLLLTADDR EENRRFYRQLLLTADD LLLTADDRVNPCIGGV R Q L D R V 1 1 0 2 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 9 0 1043.5611 J3KPS3;P04075;H3BUH7;H3BQN4;H3BPS8;H3BMQ8;H3BR04;H3BU78 J3KPS3 61 69 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A yes no 2 0.014144 78.113 By matching By MS/MS By MS/MS 1 1 1 3133500 847220 1612300 673970 2198 908 2339 6926;6927;6928 4858;4859 4858 2 QLLTLSSELSQAR EKNERVQRQLLTLSSE SSELSQARDENKRTHN R Q L A R D 1 1 0 0 0 2 1 0 0 0 4 0 0 0 0 3 1 0 0 0 0 0 13 0 1444.7886 E7EQR4;P15311 E7EQR4 530 542 EZR Ezrin yes no 2 0.0031217 71.279 By MS/MS By MS/MS By matching 1 1 1 2863400 981510 914590 967270 2199 530 2340 6929;6930;6931 4860;4861 4860 679;680 2 QLLTQWKNK SMDSARSKQLLTQWKN LLTQWKNKNESRKLSL K Q L N K N 0 0 1 0 0 2 0 0 0 0 2 2 0 0 0 0 1 1 0 0 0 0 9 1 1157.6557 W4VSQ3;Q7Z2D5 W4VSQ3 288 296 LPPR4 Lipid phosphate phosphatase-related protein type 4 yes no 2 0.0036277 79.713 By matching By MS/MS By matching 1 1 1 6539400 2356600 2190800 1991900 2200 1576 2341 6932;6933;6934 4862 4862 3440 1 QLQALSSELAQAR QKNERVKKQLQALSSE SSELAQARDETKKTQN K Q L A R D 3 1 0 0 0 3 1 0 0 0 3 0 0 0 0 2 0 0 0 0 0 0 13 0 1413.7576 P35241 P35241 527 539 RDX Radixin yes yes 2 0.012036 52.821 By MS/MS By matching 1 1 1395900 759720 636180 0 2201 1217 2342 6935;6936 4863 4863 1566 1 QLQASPGLGAGATR RGGDSAVRQLQASPGL GLGAGATRSGVGTGPP R Q L T R S 3 1 0 0 0 2 0 3 0 0 2 0 0 0 1 1 1 0 0 0 0 0 14 0 1325.7052 Q92630 Q92630 26 39 DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 2 yes yes 2 0.013528 49.466 By MS/MS By matching By matching 1 1 1 1995400 999240 661260 334860 2202 1703 2343 6937;6938;6939 4864 4864 2335 1 QLQGIQIQEAETR DMCSNYEKQLQGIQIQ QIQEAETRDQVKKLQL K Q L T R D 1 1 0 0 0 4 2 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 13 0 1512.7896 Q15276 Q15276 542 554 RABEP1 Rab GTPase-binding effector protein 1 yes yes 3 0.0079266 42.149 By matching By matching By MS/MS 1 1 1 2132700 633250 855630 643800 2203 1436 2344 6940;6941;6942 4865 4865 3381 1 QLQTLIAQTSNK ISLVAQLRQLQTLIAQ LIAQTSNKAAQTSTCV R Q L N K A 1 0 1 0 0 3 0 0 0 1 2 1 0 0 0 1 2 0 0 0 0 0 12 0 1343.7409 Q8TEY5 Q8TEY5 279 290 CREB3L4 Cyclic AMP-responsive element-binding protein 3-like protein 4;Processed cyclic AMP-responsive element-binding protein 3-like protein 4 yes yes 2 0.012716 41.383 By matching By MS/MS By matching 1 1 1 1578800 615430 556710 406630 2204 1680 2345 6943;6944;6945 4866 4866 2306 0 QLSALAEQQRR THLQGCTRQLSALAEQ ALAEQQRRILQQDWSD R Q L R R I 2 2 0 0 0 3 1 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 11 1 1298.7055 K7EKI0;Q92817 K7EKI0 238 248 EVPL Envoplakin yes no 2 0.00065631 77.674 By matching By matching By MS/MS 1 1 1 1154100 582340 361020 210710 2205 939 2346 6946;6947;6948 4867 4867 126;127 1248 0 QLSESESSLEMDDER ERREALCRQLSESESS SLEMDDERYFNEMSAQ R Q L E R Y 0 1 0 2 0 1 4 0 0 0 2 0 1 0 0 4 0 0 0 0 0 0 15 0 1753.7312 Q16204 Q16204 321 335 CCDC6 Coiled-coil domain-containing protein 6 yes yes 2 0.00010097 83.53 By MS/MS By MS/MS By MS/MS 2 2 2 12905000 4581300 4721700 3601600 2206 1454 2347;2348 6949;6950;6951;6952;6953;6954 4868;4869;4870 4869 1950 3 QLSLEGSGLGVEDLK STKYDVFRQLSLEGSG GLGVEDLKDNTPSGKS R Q L L K D 0 0 0 1 0 1 2 3 0 0 4 1 0 0 0 2 0 0 0 1 0 0 15 0 1543.8094 Q9UMZ2 Q9UMZ2 750 764 SYNRG Synergin gamma yes yes 2 5.1035E-12 109.39 By MS/MS By MS/MS By MS/MS 1 1 1 3557600 1165100 1160100 1232400 2207 1935 2349 6955;6956;6957 4871;4872;4873 4873 2734 3 QLSLPLTQSK GMRFKHQRQLSLPLTQ SLPLTQSKSSPKRGFF R Q L S K S 0 0 0 0 0 2 0 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 10 0 1113.6394 Q9C0I1 Q9C0I1 562 571 MTMR12 Myotubularin-related protein 12 yes yes 2 0.0048199 69.261 By MS/MS By matching By matching 1 1 1 2841500 1035600 874850 931070 2208 1806 2350 6958;6959;6960 4874 4874 2521 1 QLSMSSADSADAKR SWDPRRQRQLSMSSAD ADSADAKRTREEGKDW R Q L K R T 3 1 0 2 0 1 0 0 0 0 1 1 1 0 0 4 0 0 0 0 0 0 14 1 1465.6831 Q5JSZ5 Q5JSZ5 414 427 PRRC2B Protein PRRC2B yes yes 2 0.015133 53.211 By MS/MS By MS/MS 1 1 1835800 865210 0 970610 2209 1488 2351 6961;6962 4875;4876 4876 2002 1 QMSFDLTK QMQRTITRQMSFDLTK QMSFDLTKLLVTEDWF R Q M T K L 0 0 0 1 0 1 0 0 0 0 1 1 1 1 0 1 1 0 0 0 0 0 8 0 968.46372 Q9ULH0;H0Y8E4;E9PH70 Q9ULH0 916 923 KIDINS220 Kinase D-interacting substrate of 220 kDa yes no 2 0.012403 80.706 By matching By MS/MS By matching 1 1 1 2259600 953400 710140 596100 2210 1924 2352 6963;6964;6965 4877 4877 2717 1 QNCELFEQLGEYK EEPQNLIKQNCELFEQ FEQLGEYKFQNALLVR K Q N Y K F 0 0 1 0 1 2 3 1 0 0 2 1 0 1 0 0 0 0 1 0 0 0 13 0 1656.7454 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 414 426 ALB Serum albumin yes no 2 0.0098398 65.241 By MS/MS By matching By matching 1 1 1 2777500 936810 959660 881050 + 2211 194 2353 6966;6967;6968 4878 4878 1 QNGSNDSDRYSDNEEDSKIELK SSSAENTRQNGSNDSD EDSKIELKLEKREPLK R Q N L K L 0 1 3 4 0 1 3 1 0 1 1 2 0 0 0 4 0 0 1 0 0 0 22 2 2542.1055 G5E972;P42167;H0YJH7 G5E972 174 195 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3;4 1.2176E-55 135.29 By MS/MS By MS/MS By MS/MS 6 7 8 413310000 116420000 194760000 102130000 2212 734 2354;2355;2356 6969;6970;6971;6972;6973;6974;6975;6976;6977;6978;6979;6980;6981;6982;6983;6984;6985;6986;6987;6988;6989 4879;4880;4881;4882;4883;4884;4885;4886;4887;4888;4889;4890;4891;4892 4884 37;38;39;123 996;997;998;3703 14 QNNFSLAMK KMIDSARKQNNFSLAM NNFSLAMKLLKELHKE K Q N M K L 1 0 2 0 0 1 0 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 9 0 1051.5121 P78527 P78527 3249 3257 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.011093 50.791 By MS/MS By MS/MS 1 2 0 0 0 0 2213 1322 2357 6990;6991;6992 4893;4894;4895 4893 1726 3 QNSDPTSENPPLPTR SHRVEMPRQNSDPTSE ENPPLPTRIEKFDRSS R Q N T R I 0 1 2 1 0 1 1 0 0 0 1 0 0 0 4 2 2 0 0 0 0 0 15 0 1651.7802 Q9UKE5 Q9UKE5 638 652 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.0040902 58.674 By MS/MS By MS/MS By MS/MS 1 1 1 13806000 4581400 5526100 3698000 2214 1914 2358 6993;6994;6995 4896;4897;4898 4897 2700 3 QNSIENDIEEK SPETKCPKQNSIENDI IENDIEEKVSDLASRG K Q N E K V 0 0 2 1 0 1 3 0 0 2 0 1 0 0 0 1 0 0 0 0 0 0 11 0 1317.6048 F5GXF5;E7ETD6;Q12830 F5GXF5 1245 1255 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 1.3102E-05 123.26 By MS/MS By MS/MS By matching 1 1 1 4499900 1531100 1484400 1484400 2215 542 2359 6996;6997;6998 4899;4900 4899 699 2 QNSLGCIGECGVDSGFEAPR CKPLSTFRQNSLGCIG DSGFEAPRLGEQGGDF R Q N P R L 1 1 1 1 2 1 2 4 0 1 1 0 0 1 1 2 0 0 0 1 0 0 20 0 2151.9314 A1L020 A1L020 336 355 MEX3A RNA-binding protein MEX3A yes yes 2 0.0065257 50.493 By MS/MS By matching By matching 1 1 1 2932900 1321500 869490 741970 2216 292 2360 6999;7000;7001 4901 4901 385 1 QNSPVTSPGSSPLAQRRK NVRKCTDRQNSPVTSP SPLAQRRKPQPDPLQI R Q N R K P 1 2 1 0 0 2 0 1 0 0 1 1 0 0 3 4 1 0 0 1 0 0 18 2 1909.013 B5MC15;Q13191 B5MC15 474 491 CBLB E3 ubiquitin-protein ligase CBL-B yes no 3 0.0062318 44.734 By MS/MS 1 1575300 1575300 0 0 2217 361 2361 7002 4902 4902 491;3002 1 QNSSSSDSGGSIVR KVPANITRQNSSSSDS DSGGSIVRDSQRHKQL R Q N V R D 0 1 1 1 0 1 0 2 0 1 0 0 0 0 0 6 0 0 0 1 0 0 14 0 1379.6277 Q12929 Q12929 657 670 EPS8 Epidermal growth factor receptor kinase substrate 8 yes yes 2 0.013238 49.621 By MS/MS By matching 1 1 897520 561640 335880 0 2218 1370 2362 7003;7004 4903 4903 1810 1 QNTSTPVRK NATPNTPRQNTSTPVR NTSTPVRKPGPLPSSL R Q N R K P 0 1 1 0 0 1 0 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 9 1 1029.5567 Q9ULH7 Q9ULH7 373 381 MKL2 MKL/myocardin-like protein 2 yes yes 2 0.011629 60.691 By MS/MS 1 1520500 0 1520500 0 2219 1925 2363 7005 4904 4904 2719 1 QNTVHHGKDTVVR FARAHLQKQNTVHHGK HGKDTVVRITEQPERG K Q N V R I 0 1 1 1 0 1 0 1 2 0 0 1 0 0 0 0 2 0 0 3 0 0 13 1 1489.775 E5RHU8 E5RHU8 96 108 LEPROTL1 yes yes 2 0.0096969 48.527 By MS/MS By matching By matching 1 1 1 3798800 1242400 1071000 1485500 2220 508 2364 7006;7007;7008 4905 4905 3044 1 QPDISCILGTGGKSPR PTSRSLLRQPDISCIL GTGGKSPRLTQSSGFF R Q P P R L 0 1 0 1 1 1 0 3 0 2 1 1 0 0 2 2 1 0 0 0 0 0 16 1 1684.8567 G3V1T4;P57740 G3V1T4 73 88 NUP107 Nuclear pore complex protein Nup107 yes no 3 0.0062155 64.83 By MS/MS By matching By MS/MS 1 1 1 4043800 1356700 1297300 1389700 2221 710 2365 7009;7010;7011 4906;4907 4906 955;3142 2 QPEYSPESPR LHLESPQRQPEYSPES EYSPESPRCQPKPSEE R Q P P R C 0 1 0 0 0 1 2 0 0 0 0 0 0 0 3 2 0 0 1 0 0 0 10 0 1188.5411 Q9H6F5 Q9H6F5 106 115 CCDC86 Coiled-coil domain-containing protein 86 yes yes 2 0.003789 76.165 By matching By MS/MS By matching 1 1 1 4730700 1622000 1717800 1390900 2222 1825 2366 7012;7013;7014 4908 4908 2562 1 QPLLLSEDEEDTK PVGGNYGKQPLLLSED SEDEEDTKRVVRSAKD K Q P T K R 0 0 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 13 0 1515.7304 H3BPE4;Q99613;B5ME19 H3BPE4 34 46 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2 0.0052293 66.797 By MS/MS By matching 1 1 2309600 0 1306000 1003600 2223 369 2367 7015;7016 4909 4909 494 1 QPLLLSEDEEDTKR PVGGNYGKQPLLLSED EDEEDTKRVVRSAKDK K Q P K R V 0 1 0 2 0 1 3 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 14 1 1671.8315 H3BPE4;Q99613;B5ME19 H3BPE4 34 47 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 2;3 1.0556E-88 173.33 By MS/MS By MS/MS By MS/MS 2 2 2 104110000 36113000 39016000 28986000 2224 369 2368 7017;7018;7019;7020;7021;7022 4910;4911;4912;4913;4914;4915;4916 4911 494 7 QPLNTTRINAAEIESRVR LGTVLQLKQPLNTTRI AEIESRVRELSKLAET K Q P V R E 2 3 2 0 0 1 2 0 0 2 1 0 0 0 1 1 2 0 0 1 0 0 18 2 2067.1185 Q06124;H0YF12 Q06124 214 231 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 3 0.0038333 46.319 By matching By matching By MS/MS 1 1 1 5258300 3105800 636240 1516300 2225 1347 2369 7023;7024;7025 4917 4917 83 1769;3351 1 QPSDASETTGLVQR RKSPSHHRQPSDASET ETTGLVQRCVIIQKDQ R Q P Q R C 1 1 0 1 0 2 1 1 0 0 1 0 0 0 1 2 2 0 0 1 0 0 14 0 1487.7216 O15085 O15085 33 46 ARHGEF11 Rho guanine nucleotide exchange factor 11 yes yes 2 0.018053 47.037 By MS/MS By matching 1 1 900700 532900 0 367800 2226 989 2370 7026;7027 4918 4918 1323 1 QPSEQELLFR REVEPGQRQPSEQELL SEQELLFRQQALLLEQ R Q P F R Q 0 1 0 0 0 2 2 0 0 0 2 0 0 1 1 1 0 0 0 0 0 0 10 0 1245.6354 P56524 P56524 582 591 HDAC4 Histone deacetylase 4 no no 1 NaN 0 0 0 0 2227 1299 0 QPTPPFFGR GGFDGQARQPTPPFFG PTPPFFGRDRSPLRRS R Q P G R D 0 1 0 0 0 1 0 1 0 0 0 0 0 2 3 0 1 0 0 0 0 0 9 0 1045.5345 Q96PK6 Q96PK6 204 212 RBM14 RNA-binding protein 14 yes yes 2 0.0035949 134.84 By MS/MS By MS/MS By MS/MS 1 1 1 29836000 9454300 10025000 10357000 2228 1753 2371 7028;7029;7030 4919;4920;4921;4922;4923;4924;4925;4926;4927 4921 3482 9 QPTPPSEAAASK VEPVPVTKQPTPPSEA PSEAAASKKKPGQKKS K Q P S K K 3 0 0 0 0 1 1 0 0 0 0 1 0 0 3 2 1 0 0 0 0 0 12 0 1182.5881 Q86UP2 Q86UP2 151 162 KTN1 Kinectin yes yes 2 0.0046502 84.817 By MS/MS By MS/MS By matching 1 1 1 3073100 1042300 1198500 832290 2229 1595 2372 7031;7032;7033 4928;4929 4928 3447 2 QQASKSPYNGVR VKKEPEDRQQASKSPY KSPYNGVRKDSKRSRN R Q Q V R K 1 1 1 0 0 2 0 1 0 0 0 1 0 0 1 2 0 0 1 1 0 0 12 1 1333.6739 Q9UK58 Q9UK58 369 380 CCNL1 Cyclin-L1 yes yes 2 0.010391 67.519 By matching By matching By MS/MS 1 1 1 1644900 445910 675650 523310 2230 1912 2373 7034;7035;7036 4930 4930 2696 1 QQFYHSVQDLSGGSR CVDMSTNRQQFYHSVQ QDLSGGSRQHEAPSNR R Q Q S R Q 0 1 0 1 0 3 0 2 1 0 1 0 0 1 0 3 0 0 1 1 0 0 15 0 1707.7965 P10398 P10398 152 166 ARAF Serine/threonine-protein kinase A-Raf yes yes 2 0.0011915 77.597 By MS/MS By matching 1 1 4096000 2290200 1805700 0 2231 1136 2374 7037;7038 4931 4931 3766 1 QQPQPSQTESPQEAQIIQAK RSSRLQAKQQPQPSQT EAQIIQAKKRKTTQFT K Q Q A K K 2 0 0 0 0 7 2 0 0 2 0 1 0 0 3 2 1 0 0 0 0 0 20 0 2235.1131 E5RHN2;E5RK20;Q8WUE3;O96020 E5RHN2 12 31 CCNE2 G1/S-specific cyclin-E2 yes no 3 0.0087859 43.611 By MS/MS By matching By matching 1 1 1 2537100 763400 1024900 748750 2232 507 2375 7039;7040;7041 4932 4932 650 1 QQQEPTGEPSPK RGRGRPRKQQQEPTGE PTGEPSPKRPRGRPKG K Q Q P K R 0 0 0 0 0 3 2 1 0 0 0 1 0 0 3 1 1 0 0 0 0 0 12 0 1324.6259 P52926;F5H2U8;F5H2A4;F5H6H0 P52926 35 46 HMGA2 High mobility group protein HMGI-C yes no 2 0.0012682 83.53 By MS/MS By MS/MS By MS/MS 2 2 2 4911000 1559100 1828200 1523700 2233 1287 2376 7042;7043;7044;7045;7046;7047 4933;4934;4935;4936;4937;4938 4937 1696;3340 6 QQQQQQQQHSENK AKLLNKLKQQQQQQQQ QQQHSENKRENSEDPE K Q Q N K R 0 0 1 0 0 8 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 13 0 1637.7506 A0A087WYN9;Q7Z478 A0A087WYN9 501 513 DHX29 ATP-dependent RNA helicase DHX29 yes no 2 0.016606 44.309 By matching By MS/MS By matching 1 1 1 6358400 2431800 1811700 2114800 2234 81 2377 7048;7049;7050 4939 4939 1 QQSEEDLLLQDFSR MAPKGSSKQQSEEDLL LLLQDFSRNLSAKSSA K Q Q S R N 0 1 0 2 0 3 2 0 0 0 3 0 0 1 0 2 0 0 0 0 0 0 14 0 1706.8111 C9JA28;Q9UNL2 C9JA28 9 22 SSR3 Translocon-associated protein subunit gamma yes no 2 0.001152 78.692 By MS/MS By MS/MS By MS/MS 1 1 1 4772800 1918000 1322800 1532000 2235 423 2378 7051;7052;7053 4940;4941;4942 4940 564 3 QQSTPQAANSPPNLGAK TPPSKDPRQQSTPQAA SPPNLGAKIPQGCHKQ R Q Q A K I 3 0 2 0 0 3 0 1 0 0 1 1 0 0 3 2 1 0 0 0 0 0 17 0 1707.854 F8WE62;F5H070;Q9Y4C1 F8WE62 316 332 KDM3A Lysine-specific demethylase 3A yes no 2 0.01446 45.077 By MS/MS 1 0 0 0 0 2236 644 2379 7054 4943 4943 869;3112 1 QQVPSGESAILDR KELLIFNKQQVPSGES GESAILDRVADGMVFG K Q Q D R V 1 1 0 1 0 2 1 1 0 1 1 0 0 0 1 2 0 0 0 1 0 0 13 0 1398.7103 P09874 P09874 270 282 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.011152 62.303 By MS/MS By matching By matching 1 1 1 1922100 587560 747990 586540 2237 1131 2380 7055;7056;7057 4944 4944 1 QRGSETDTDSEIHESASDKDSLSK EVVPKRRRQRGSETDT SDKDSLSKGKLPKREE R Q R S K G 1 1 0 4 0 1 3 1 1 1 1 2 0 0 0 6 2 0 0 0 0 0 24 2 2621.1689 E7EPN9;Q9Y520 E7EPN9 1262 1285 PRRC2C Protein PRRC2C yes no 4 0.0037974 53.96 By matching By MS/MS By MS/MS 1 1 1 9247600 3615000 3569200 2063500 2238 526 2381 7058;7059;7060 4945;4946 4945 674;3058 2 QRHDGAFLIR KAEEMLSKQRHDGAFL HDGAFLIRESESAPGD K Q R I R E 1 2 0 1 0 1 0 1 1 1 1 0 0 1 0 0 0 0 0 0 0 0 10 1 1211.6523 P62993;J3KT38;J3QRL5 P62993 77 86 GRB2 Growth factor receptor-bound protein 2 yes no 3 0.0010202 98.754 By MS/MS 1 951720 951720 0 0 2239 1316 2382 7061 4947 4947 1 QRKMIALTTK HGVKLSQKQRKMIALT KMIALTTKENNSGMNS K Q R T K E 1 1 0 0 0 1 0 0 0 1 1 2 1 0 0 0 2 0 0 0 0 0 10 2 1188.7013 H0Y9N7;E9PDR5;E7EPI0;Q9P2D0 H0Y9N7 36 45 IBTK Inhibitor of Bruton tyrosine kinase yes no 2 0.015975 41.704 By MS/MS 1 0 0 0 0 2240 524 2383 7062 4948 4948 3053;3054 1 QRPDLGSAQK GVRGTPVRQRPDLGSA PDLGSAQKGLQVDLQS R Q R Q K G 1 1 0 1 0 2 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 10 1 1098.5782 E5RFR3;E5RFJ8;P33991 E5RFR3 114 123 MCM4 DNA replication licensing factor MCM4 yes no 2 0.00021 122.18 By MS/MS By MS/MS By MS/MS 1 2 1 3570400 1082200 1573100 915000 2241 502 2384 7063;7064;7065;7066 4949;4950;4951 4950 644 3 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER ________________ EPEEQEERKPSATQQK R Q R E R K 3 3 0 5 0 3 6 1 0 0 0 0 0 0 4 7 1 0 0 0 0 0 33 2 3588.4956 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 6 38 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 yes no 4 0.00024518 47.286 By MS/MS By MS/MS By matching 1 1 1 10879000 3240600 5330200 2308000 2242 288 2385 7067;7068;7069 4952;4953 4953 380;381;382 2 QRSPIALPVK RPSSFRDRQRSPIALP SPIALPVKQEPPQIDA R Q R V K Q 1 1 0 0 0 1 0 0 0 1 1 1 0 0 2 1 0 0 0 1 0 0 10 1 1107.6764 Q8TF01 Q8TF01 209 218 PNISR Arginine/serine-rich protein PNISR yes yes 2 0.00017394 119.34 By MS/MS By MS/MS By MS/MS 1 1 1 7031700 2287500 2777200 1967000 2243 1681 2386 7070;7071;7072 4954;4955;4956 4954 2307 3 QRSPSPAPAPAPAAAAGPPTR TQRRERYRQRSPSPAP AAAGPPTRKKSRRERK R Q R T R K 7 2 0 0 0 1 0 1 0 0 0 0 0 0 7 2 1 0 0 0 0 0 21 1 1967.0337 Q9H7N4 Q9H7N4 496 516 SCAF1 Splicing factor, arginine/serine-rich 19 yes yes 3 0.001844 69.581 By MS/MS By matching By matching 1 1 1 21936000 7112300 7716300 7107500 2244 1831 2387 7073;7074;7075 4957 4957 2571;2572 1 QSFDDNDSEELEDKDSK KKGQKGKKQSFDDNDS ELEDKDSKSKKTAKPK K Q S S K S 0 0 1 5 0 1 3 0 0 0 1 2 0 1 0 3 0 0 0 0 0 0 17 1 1999.8131 A0A087WUT6;O60841 A0A087WUT6 106 122 EIF5B Eukaryotic translation initiation factor 5B yes no 3 0.0028792 56.553 By matching By MS/MS By MS/MS 1 1 1 55099000 21402000 18013000 15685000 2245 41 2388 7076;7077;7078 4958;4959 4959 47;48 2 QSGLSSLVNGKSPIR ADMNESCKQSGLSSLV VNGKSPIRSLMHRSAR K Q S I R S 0 1 1 0 0 1 0 2 0 1 2 1 0 0 1 4 0 0 0 1 0 0 15 1 1541.8526 H0Y612;Q9UPN9 H0Y612 612 626 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 3 0.00076027 73.877 By matching By MS/MS 1 1 1215000 0 520080 694890 2246 761 2389 7079;7080 4960 4960 1041 1 QSGSPTLDTAPNGR FGKNIYRKQSGSPTLD LDTAPNGRYGIGYLMA K Q S G R Y 1 1 1 1 0 1 0 2 0 0 1 0 0 0 2 2 2 0 0 0 0 0 14 0 1399.6692 Q9H2J7 Q9H2J7 698 711 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 2 0.0047492 61.344 By MS/MS By matching By MS/MS 1 1 2 4820300 1894900 1606500 1318900 2247 1817 2390;2391 7081;7082;7083;7084 4961;4962 4961 105 2548;2549 2 QSGTLSAASDLIK Q S I K 2 0 0 1 0 1 0 1 0 1 2 1 0 0 0 3 1 0 0 0 0 0 13 0 1289.6827 REV__P46013 yes yes 2 0.0079343 58.63 By matching By MS/MS By matching 1 2 1 19390000 6407800 8618100 4364500 + 2248 2003 2392 7085;7086;7087;7088 4963 4963 2856 1 QSHSESPSLQSK DTSSPEVRQSHSESPS ESPSLQSKSQTSPKGG R Q S S K S 0 0 0 0 0 2 1 0 1 0 1 1 0 0 1 5 0 0 0 0 0 0 12 0 1313.6212 Q9UQ35 Q9UQ35 1078 1089 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 4.0015E-06 109.99 By MS/MS By MS/MS By MS/MS 2 2 1 9620400 3282100 4428500 1909800 2249 1945 2393 7089;7090;7091;7092;7093 4964;4965;4966;4967;4968 4965 2761;2762;2763 5 QSINAGFQSLK ________________ NAGFQSLKTLIPHTDG M Q S L K T 1 0 1 0 0 2 0 1 0 1 1 1 0 1 0 2 0 0 0 0 0 0 11 0 1191.6248 I3L254 I3L254 2 12 TFAP4 yes yes 2 0.015909 44.543 By matching By MS/MS By matching 1 1 1 909490 301040 267570 340880 2250 887 2394 7094;7095;7096 4969 4969 1194 1 QSISFPEGLR ALTADLPKQSISFPEG ISFPEGLRTPASPSSA K Q S L R T 0 1 0 0 0 1 1 1 0 1 1 0 0 1 1 2 0 0 0 0 0 0 10 0 1132.5877 H7C3M7;O94887 H7C3M7 73 82 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 yes no 2 0.017197 55.401 By matching By MS/MS By matching 1 1 1 1685000 667760 575420 441860 2251 870 2395 7097;7098;7099 4970 4970 1168 1 QSLDTGPVYQSR Q S S R 0 1 0 1 0 2 0 1 0 0 1 0 0 0 1 2 1 0 1 1 0 0 12 0 1349.6575 REV__E5RHN6 yes no 2 0.018849 63.966 By MS/MS 1 763150 0 763150 0 + 2252 1990 2396 7100 4971 4971 3943 0 QSLPASPR RERSLKKRQSLPASPR QSLPASPRARLSASTA R Q S P R A 1 1 0 0 0 1 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 0 8 0 854.46102 H0YF21;Q3KQU3 H0YF21 24 31 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.00953 97.472 By MS/MS 1 630720 0 0 630720 2253 791 2397 7101 4972 4972 1077 1 QSLQLTFRSLCTYFSDK NVTEQEHKQSLQLTFR LCTYFSDKDPGGLLLL K Q S D K D 0 1 0 1 1 2 0 0 0 0 3 1 0 2 0 3 2 0 1 0 0 0 17 1 2093.0252 O43149 O43149 891 907 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes yes 3 0.0028212 46.319 By matching By matching By MS/MS 1 1 1 2300200 1207200 663950 429050 2254 999 2398 7102;7103;7104 4973 4973 128;129 3240;3241 1 QSNASSDVEVEEK SSQQAATKQSNASSDV SDVEVEEKETSVSKED K Q S E K E 1 0 1 1 0 1 3 0 0 0 0 1 0 0 0 3 0 0 0 2 0 0 13 0 1420.6318 O75475 O75475 101 113 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 0 241.41 By MS/MS By MS/MS By MS/MS 1 2 2 25395000 8166500 10565000 6663600 2255 1034 2399 7105;7106;7107;7108;7109 4974;4975;4976;4977;4978 4975 1384;1385 5 QSNASSDVEVEEKETSVSK SSQQAATKQSNASSDV EKETSVSKEDTDHEEK K Q S S K E 1 0 1 1 0 1 4 0 0 0 0 2 0 0 0 5 1 0 0 3 0 0 19 1 2051.9495 O75475 O75475 101 119 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 0.0090403 48.376 By matching By matching By MS/MS 1 1 1 4437700 1746400 1476700 1214700 2256 1034 2400 7110;7111;7112 4979 4979 1384;1385 1 QSNASSDVEVEEKETSVSKEDTDHEEK SSQQAATKQSNASSDV EDTDHEEKASNEDVTK K Q S E K A 1 0 1 3 0 1 7 0 1 0 0 3 0 0 0 5 2 0 0 3 0 0 27 2 3035.3327 O75475 O75475 101 127 PSIP1 PC4 and SFRS1-interacting protein yes yes 4 0.0060411 44.74 By matching By MS/MS 1 1 19610000 0 11162000 8447600 2257 1034 2401 7113;7114 4980 4980 1384;1385;3251 1 QSPASPPPLGGGAPVR ASPSPTSRQSPASPPP LGGGAPVRTAKAERRH R Q S V R T 2 1 0 0 0 1 0 3 0 0 1 0 0 0 5 2 0 0 0 1 0 0 16 0 1486.7892 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1363 1378 SCRIB Protein scribble homolog yes no 2 3.2099E-19 124.09 By MS/MS By MS/MS By MS/MS 1 1 1 26163000 9339200 9485300 7338500 2258 226 2402 7115;7116;7117 4981;4982;4983;4984 4983 308 4 QSPGPALAR AAAAASVRQSPGPALA SPGPALARLEGREFEF R Q S A R L 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 9 0 895.48756 P85037 P85037 100 108 FOXK1 Forkhead box protein K1 yes yes 2 0.0076043 75.652 By MS/MS By MS/MS By MS/MS 1 1 1 8179500 2557900 3159400 2462100 2259 1324 2403 7118;7119;7120 4985;4986;4987 4986 1729 3 QSSLTFQSSDPEQMR GPSFTVMRQSSLTFQS SSDPEQMRQSLLTAIR R Q S M R Q 0 1 0 1 0 3 1 0 0 0 1 0 1 1 1 4 1 0 0 0 0 0 15 0 1739.7785 A0A0X1KG75;A0A0D9SG04;Q53SF7 A0A0X1KG75 1108 1122 COBLL1 Cordon-bleu protein-like 1 yes no 2 0.0010608 77.593 By matching By MS/MS 1 1 1361100 0 543320 817780 2260 217 2404 7121;7122 4988 4988 299;300 1 QSSSSDTDLSLTPK SPSKSYSRQSSSSDTD TDLSLTPKTGMGSGSA R Q S P K T 0 0 0 2 0 1 0 0 0 0 2 1 0 0 1 5 2 0 0 0 0 0 14 0 1464.6944 Q86YS7;H0YFE9 Q86YS7 303 316 C2CD5 C2 domain-containing protein 5 yes no 2 0.00055659 81.632 By matching By MS/MS By MS/MS 1 1 1 2242200 789750 826420 626020 2261 1605 2405 7123;7124;7125 4989;4990 4990 2195;2196 2 QSVDKVTSPTKV SKRNLWEKQSVDKVTS KVTSPTKV________ K Q S K V - 0 0 0 1 0 1 0 0 0 0 0 2 0 0 1 2 2 0 0 3 0 0 12 2 1287.7034 E7EX44;Q05682 E7EX44 546 557 CALD1 Caldesmon yes no 2 0.0025548 81.128 By matching By MS/MS By matching 1 1 1 23917000 9465900 8639700 5811800 2262 558 2406 7126;7127;7128 4991 4991 745;3078 1 QTALVELVK EKERQIKKQTALVELV TALVELVKHKPKATKE K Q T V K H 1 0 0 0 0 1 1 0 0 0 2 1 0 0 0 0 1 0 0 2 0 0 9 0 999.59645 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 550 558 ALB Serum albumin yes no 2 0.012069 75.378 By MS/MS By MS/MS By matching 1 1 1 1429700 796060 288350 345260 + 2263 194 2407 7129;7130;7131 4992;4993 4992 2 QTEAREIEWREK ERLQAALRQTEAREIE REIEWREKAQDLALSL R Q T E K A 1 2 0 0 0 1 4 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 12 2 1573.7849 H7C0P0;Q9BV73 H7C0P0 649 660 CEP250 Centrosome-associated protein CEP250 yes no 2 0.018005 41.283 By MS/MS 1 788750 788750 0 0 2264 860 2408 7132 4994 4994 3188 0 QTEDYCLASNKVGR TVTVLSTKQTEDYCLA LASNKVGRCRGSFPRW K Q T G R C 1 1 1 1 1 1 1 1 0 0 1 1 0 0 0 1 1 0 1 1 0 0 14 1 1639.7624 H3BR01;H3BMB6;H3BTQ8;H3BSM2;H3BVD9;O43278 H3BR01 63 76 SPINT1 Kunitz-type protease inhibitor 1 yes no 3 0.0027251 56.139 By matching By MS/MS 1 1 1835800 993420 842340 0 2265 815 2409 7133;7134 4995 4995 41 3716 1 QTEPVSPVLK AIENCERRQTEPVSPV EPVSPVLKRIKRCLRS R Q T L K R 0 0 0 0 0 1 1 0 0 0 1 1 0 0 2 1 1 0 0 2 0 0 10 0 1096.6128 Q8IYH5 Q8IYH5 108 117 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.013747 58.116 By matching By matching By MS/MS 1 1 1 3304700 1179800 1221700 903260 2266 1619 2410 7135;7136;7137 4996 4996 2220 1 QTEPVSPVLKR AIENCERRQTEPVSPV PVSPVLKRIKRCLRSE R Q T K R I 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 1 1 0 0 2 0 0 11 1 1252.7139 Q8IYH5 Q8IYH5 108 118 ZZZ3 ZZ-type zinc finger-containing protein 3 yes yes 2 0.0035849 78.098 By MS/MS By MS/MS By matching 1 1 1 4891800 1912900 1609600 1369200 2267 1619 2411 7138;7139;7140 4997;4998 4998 2220 2 QTLPSSPTTTK TVNPDRIKQTLPSSPT PSSPTTTKSSPSDPMT K Q T T K S 0 0 0 0 0 1 0 0 0 0 1 1 0 0 2 2 4 0 0 0 0 0 11 0 1159.6085 F8VW64;F8VWX1;F8W659;J3KQU3;P51513 F8VW64 27 37 NOVA1 RNA-binding protein Nova-1 yes no 2 0.00015525 105.66 By MS/MS 1 5731800 5731800 0 0 2268 676 2412 7141 4999 4999 903 1 QTSNPNGPTPQYQTTAR RIGSVTSRQTSNPNGP PQYQTTARVGSPLTLT R Q T A R V 1 1 2 0 0 3 0 1 0 0 0 0 0 0 3 1 4 0 1 0 0 0 17 0 1859.8762 Q99569;A0A0D9SF60 Q99569 295 311 PKP4 Plakophilin-4 yes no 2 0.014832 46.063 By matching By MS/MS 1 1 1053900 476280 577590 0 2269 1766 2413 7142;7143 5000 5000 3900 1 QTVVRTLNATGEEIIQQSSK LQDGIGQRQTVVRTLN EIIQQSSKTDASILQE R Q T S K T 1 1 1 0 0 3 2 1 0 2 1 1 0 0 0 2 3 0 0 2 0 0 20 1 2201.1652 E9PDN5;A0A075B6G3;P11532 E9PDN5 2152 2171 DMD Dystrophin yes no 4 0.0048982 40.844 By matching By matching By MS/MS 1 1 1 2300400 490330 519710 1290400 2270 6 2414 7144;7145;7146 5001 5001 3 3 1 QVAEQGGDLSPAANR RIQVAQEKQVAEQGGD DLSPAANRSQKASQSR K Q V N R S 3 1 1 1 0 2 1 2 0 0 1 0 0 0 1 1 0 0 0 1 0 0 15 0 1511.7328 O94804 O94804 429 443 STK10 Serine/threonine-protein kinase 10 yes yes 2 8.0353E-05 84.62 By MS/MS By MS/MS By matching 1 1 1 8249800 3459900 2824000 1965900 2271 1050 2415 7147;7148;7149 5002;5003 5003 1410 2 QVAGDAPVEQATAETASPVHR SEGATELRQVAGDAPV ETASPVHREEHGRGES R Q V H R E 5 1 0 1 0 2 2 1 1 0 0 0 0 0 2 1 2 0 0 3 0 0 21 0 2133.0451 A0A087X055;Q92766 A0A087X055 373 393 RREB1 Ras-responsive element-binding protein 1 yes no 3 0.0080306 65.423 By matching By MS/MS By matching 1 1 1 3764800 1286500 1293800 1184500 2272 94 2416 7150;7151;7152 5004 5004 114;2893 1 QVGETSAPGDTLDGTPR KENDTGSKQVGETSAP DTLDGTPRTLNTVFDF K Q V P R T 1 1 0 2 0 1 1 3 0 0 1 0 0 0 2 1 3 0 0 1 0 0 17 0 1699.8013 Q9NZN5;E9PMR6 Q9NZN5 689 705 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2 0.0050599 73.279 By MS/MS By matching 1 1 6342500 3257100 0 3085400 2273 1885 2417 7153;7154 5005 5005 3521 1 QVLQSTQSPR EEELKRQRQVLQSTQS LQSTQSPRTKNAPSLP R Q V P R T 0 1 0 0 0 3 0 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 10 0 1142.6044 Q9Y2D5 Q9Y2D5 741 750 AKAP2 A-kinase anchor protein 2 yes yes 2 8.6683E-05 112.11 By MS/MS By MS/MS By MS/MS 1 1 1 6867100 2209400 2465800 2191800 2274 1953 2418 7155;7156;7157 5006;5007;5008;5009 5009 2788;3551 4 QVQEFLKDGDDVIIIGVFK SKEILTLKQVQEFLKD VIIIGVFKGESDPAYQ K Q V F K G 0 0 0 3 0 2 1 2 0 3 1 2 0 2 0 0 0 0 0 3 0 0 19 1 2162.1623 P13667 P13667 295 313 PDIA4 Protein disulfide-isomerase A4 yes yes 3 0.0028958 55.912 By MS/MS By MS/MS 1 1 2352300 1200700 1151600 0 2275 1155 2419 7158;7159 5010;5011 5010 2 QVQNLVNKSK EKILEYKRQVQNLVNK QNLVNKSKKIVQLKPR R Q V S K K 0 0 2 0 0 2 0 0 0 0 1 2 0 0 0 1 0 0 0 2 0 0 10 1 1156.6564 P15924 P15924 434 443 DSP Desmoplakin yes yes 2 0.018588 49.28 By MS/MS 1 3564800 0 0 3564800 2276 1161 2420 7160 5012 5012 1506 1 QVTMAELNAIIGVR AQAVERAKQVTMAELN LNAIIGVRGLPGLPPT K Q V V R G 2 1 1 0 0 1 1 1 0 2 1 0 1 0 0 0 1 0 0 2 0 0 14 0 1513.8286 Q5T3G3 Q5T3G3 113 126 TLE1 yes yes 2 0.0026259 56.404 By MS/MS 1 5685900 0 5685900 0 2277 1503 2421 7161 5013 5013 92;136 145 1 QVVESAYEVIK EQWKEVHKQVVESAYE ESAYEVIKLKGYTSWA K Q V I K L 1 0 0 0 0 1 2 0 0 1 0 1 0 0 0 1 0 0 1 3 0 0 11 0 1263.6711 P00338 P00338 233 243 LDHA L-lactate dehydrogenase A chain yes yes 2 0.0013585 91.658 By matching By MS/MS By matching 1 1 1 2049400 513550 1402900 132960 2278 1077 2422 7162;7163;7164 5014 5014 1 QWQPTLLQAMQVEK CAVWKFGKQWQPTLLQ LQAMQVEKGATGISLS K Q W E K G 1 0 0 0 0 4 1 0 0 0 2 1 1 0 1 0 1 1 0 1 0 0 14 0 1698.8763 Q15572 Q15572 324 337 TAF1C TATA box-binding protein-associated factor RNA polymerase I subunit C yes yes 2 0.016999 41.092 By MS/MS 1 0 0 0 0 2279 1444 2423 7165 5015 5015 3385 1 QYATLDVYNPFETR VIQHRPSRQYATLDVY VYNPFETREPPPAYEP R Q Y T R E 1 1 1 1 0 1 1 0 0 0 1 0 0 1 1 0 2 0 2 1 0 0 14 0 1715.8155 O14828 O14828 34 47 SCAMP3 Secretory carrier-associated membrane protein 3 yes yes 2 1.522E-16 134.49 By MS/MS By MS/MS By matching 1 1 1 18450000 8761800 4025100 5663100 2280 984 2424 7166;7167;7168 5016;5017 5016 3743 2 QYPDSPHPVPHR GHLSLPQKQYPDSPHP SPHPVPHRSLFSPQNT K Q Y H R S 0 1 0 1 0 1 0 0 2 0 0 0 0 0 4 1 0 0 1 1 0 0 12 0 1428.6898 Q5VT52 Q5VT52 961 972 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 0.018568 69.598 By MS/MS 1 0 0 0 0 2281 1518 2425 7169 5018 5018 2055 1 RADLNQGIGEPQSPSR ELSAKLLRRADLNQGI GEPQSPSRRVFNPYTE R R A S R R 1 2 1 1 0 2 1 2 0 1 1 0 0 0 2 2 0 0 0 0 0 0 16 1 1723.8602 Q96C19 Q96C19 62 77 EFHD2 EF-hand domain-containing protein D2 yes yes 3 0.0046321 57.52 By matching By matching By MS/MS 1 1 1 1579300 406660 681550 491100 2282 1723 2426 7170;7171;7172 5019 5019 2366;2367 1 RAEDGSVIDYELIDQDAR MVALAKGRRAEDGSVI ELIDQDARDLYDAGVK R R A A R D 2 2 0 4 0 1 2 1 0 2 1 0 0 0 0 1 0 0 1 1 0 0 18 1 2063.976 H0YMD0;H0YMU9;H0YN42;P07355;H0YNA0;H0YN28;H0YL33;H0YNP5;H0YM50 H0YMD0 179 196 ANXA2 Annexin;Annexin A2 yes no 3 0.015851 35.044 By MS/MS By matching By matching 1 1 1 1008500 406220 222050 380230 2283 806 2427 7173;7174;7175 5020 5020 1 RAGDLLEDSPK NEKGALKRRAGDLLED DLLEDSPKRPKEAENP R R A P K R 1 1 0 2 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 11 1 1199.6146 P51858 P51858 157 167 HDGF Hepatoma-derived growth factor yes yes 2 0.0021906 87.363 By matching By MS/MS By matching 1 1 1 31241000 11961000 10247000 9033000 2284 1279 2428 7176;7177;7178 5021 5021 1685 1 RALPNNTSSSPQPK ELPPGSTKRALPNNTS TSSSPQPKKKPLDGEY K R A P K K 1 1 2 0 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 14 1 1495.7743 A0A087X1Q1;A0A087WZU8;P04637;A0A087WXZ1;A0A087WT22;E7ESS1;J3KP33;A0A0U1RQC9 A0A087X1Q1 147 160 TP53 Cellular tumor antigen p53 yes no 2 0.0078933 61.353 By MS/MS By MS/MS By MS/MS 2 2 1 11899000 4190300 5550600 2158400 2285 89 2429 7179;7180;7181;7182;7183 5022;5023;5024 5023 108;109 3 RANSLLEETK SQVLVRKRRANSLLEE NSLLEETKQGNLEREC R R A T K Q 1 1 1 0 0 0 2 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 10 1 1159.6197 H7BXT0;P07225 H7BXT0 73 82 PROS1 Vitamin K-dependent protein S yes no 2 0.014623 43.769 By MS/MS 1 0 0 0 0 2286 853 2430 7184 5025 5025 1151;3186 1 RAPSVANVGSHCDLSLK KESITRRRRAPSVANV SHCDLSLKIPEISIQD R R A L K I 2 1 1 1 1 0 0 1 1 0 2 1 0 0 1 3 0 0 0 2 0 0 17 1 1809.9156 Q5HY54;Q60FE5;P21333 Q5HY54 2109 2125 FLNA Filamin-A yes no 3 1.2169E-05 85.576 By matching By MS/MS By matching 1 1 1 5055400 2093600 1643000 1318800 2287 1182 2431 7185;7186;7187 5026 5026 1534 1 RAQIPEGDYLSYR LGDPGSTRRAQIPEGD EGDYLSYREFHSAGRT R R A Y R E 1 2 0 1 0 1 1 1 0 1 1 0 0 0 1 1 0 0 2 0 0 0 13 1 1566.7791 Q96RT1 Q96RT1 1096 1108 ERBB2IP Protein LAP2 yes yes 3 0.0049563 71.558 By MS/MS 1 0 0 0 0 2288 1757 2432 7188 5027 5027 2426;3897 1 RASEDTTSGSPPKK QKVEIGQKRASEDTTS TSGSPPKKSSAGPKRD K R A K K S 1 1 0 1 0 0 1 1 0 0 0 2 0 0 2 3 2 0 0 0 0 0 14 2 1459.7267 H0YER7;G3V1C3;Q9BZZ5 H0YER7 270 283 API5 Apoptosis inhibitor 5 yes no 3 0.0041415 63.894 By MS/MS By matching 1 1 15453000 7314000 0 8138800 2289 708 2433 7189;7190 5028 5028 953;954 0 RASGLSTEGATGPSADTSGSELDGR PRPRRRSRRASGLSTE SGSELDGRCSLRRGSS R R A G R C 3 2 0 2 0 0 2 5 0 0 2 0 0 0 1 5 3 0 0 0 0 0 25 1 2378.0946 Q7Z628 Q7Z628 19 43 NET1 Neuroepithelial cell-transforming gene 1 protein yes yes 3 0.00022702 63.115 By MS/MS By MS/MS 1 1 3724600 2507100 0 1217500 2290 1585 2434 7191;7192 5029;5030 5029 2161;2162;3442 2 RASGQAFELILSPR IQVKELEKRASGQAFE FELILSPRSKESVPEF K R A P R S 2 2 0 0 0 1 1 1 0 1 2 0 0 1 1 2 0 0 0 0 0 0 14 1 1543.8471 A2A2D0;P16949 A2A2D0 14 27 STMN1 Stathmin yes no 2;3 4.9838E-06 102.39 By MS/MS By MS/MS By MS/MS 2 2 3 16148000 5879400 5616400 4652600 2291 293 2435;2436 7193;7194;7195;7196;7197;7198;7199 5031;5032;5033;5034;5035;5036;5037 5033 386;387 7 RASISEPSDTDPEPR VKSRVRVRRASISEPS SDTDPEPRTLNPSPAG R R A P R T 1 2 0 2 0 0 2 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 15 1 1655.7751 Q8N1F8;C9JQV3 Q8N1F8 396 410 STK11IP Serine/threonine-protein kinase 11-interacting protein yes no 2;3 5.5763E-08 100.27 By MS/MS By MS/MS By MS/MS 2 2 2 15403000 6499100 4756300 4147600 2292 1623 2437 7200;7201;7202;7203;7204;7205 5038;5039;5040;5041 5039 2224 4 RASLSEIGFGK QPMSRRSRRASLSEIG LSEIGFGKMETYIKLE R R A G K M 1 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 0 0 0 11 1 1163.6299 F5H6Z0;Q00537 F5H6Z0 125 135 CDK17 Cyclin-dependent kinase 17 yes no 2 0.0019694 96.464 By matching By MS/MS By MS/MS 1 1 1 6126600 2369800 1793700 1963200 2293 658 2438 7206;7207;7208 5042;5043 5043 880 2 RASLTLEEK DGLQNKHKRASLTLEE ASLTLEEKQKLAKEQE K R A E K Q 1 1 0 0 0 0 2 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 9 1 1045.5768 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 679 687 SCYL2 SCY1-like protein 2 yes no 2 0.0036847 98.156 By MS/MS By matching 1 1 2896500 0 1590600 1305900 2294 251 2439 7209;7210 5044 5044 334 1 RASPSKPASAPASR ADAKAPEKRASPSKPA PASAPASRSGSKSTQT K R A S R S 4 2 0 0 0 0 0 0 0 0 0 1 0 0 3 4 0 0 0 0 0 0 14 2 1381.7426 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4;B5MEG9 E7EVA0 1930 1943 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.003817 76.156 By MS/MS By MS/MS By matching 1 1 1 21873000 8177400 7303500 6391900 2295 551 2440 7211;7212;7213 5045;5046 5046 730 2 RASPSPPPK SPPPPPKRRASPSPPP ASPSPPPKRRVSHSPP R R A P K R 1 1 0 0 0 0 0 0 0 0 0 1 0 0 4 2 0 0 0 0 0 0 9 1 935.51886 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 633 641 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.012495 58.781 By matching By MS/MS By MS/MS 1 1 1 2784300 937110 1016800 830340 2296 322 2441 7214;7215;7216 5047;5048 5047 439;440 2 RASSASVPAVGASAEGTR RRQEPLRRRASSASVP GASAEGTRRDRLGSYS R R A T R R 5 2 0 0 0 0 1 2 0 0 0 0 0 0 1 4 1 0 0 2 0 0 18 1 1672.8493 V9GYZ0;Q9BZ23 V9GYZ0 43 60 PANK2 Pantothenate kinase 2, mitochondrial yes no 2 0.0021752 59.116 By MS/MS By matching By matching 1 1 1 2040300 549260 663130 827860 2297 1800 2442 7217;7218;7219 5049 5049 2502;2503 1 RASSLNVLNVGGK EPKNPGMKRASSLNVL NVLNVGGKAAEDRFQE K R A G K A 1 1 2 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 2 0 0 13 1 1313.7415 H0YG16;H0YJK1;G3V5R9 H0YG16 228 240 KLC1 yes no 2 0.00017983 93.51 By matching By MS/MS By MS/MS 1 1 1 5382900 1853200 1695500 1834200 2298 794 2443 7220;7221;7222 5050;5051 5051 1080;1081 2 RCGQCPSVQNERGVMTPSDR R C D R 0 3 1 1 2 2 1 2 0 0 0 0 1 0 2 2 1 0 0 2 0 0 20 2 2333.0423 REV__K7EKN6 yes no 3 0.010508 58.5 By matching By MS/MS By matching 1 2 1 40489000 11154000 19946000 9389400 + 2299 1991 2444 7223;7224;7225;7226 5052 5052 2845 1 RDGPGLERSPGEPGGAAPER EPLRKRPRRDGPGLER PGGAAPEREVPAAARG R R D E R E 2 3 0 1 0 0 3 5 0 0 1 0 0 0 4 1 0 0 0 0 0 0 20 2 2003.9773 Q96EB6 Q96EB6 39 58 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 3 0.01019 58.864 By MS/MS By MS/MS By matching 1 1 1 10554000 5635200 2983300 1935300 2300 1731 2445 7227;7228;7229 5053;5054 5054 2379 2 RDKSEASIVK YSIEQPLRRDKSEASI KSEASIVKNCTVSKEP R R D V K N 1 1 0 1 0 0 1 0 0 1 0 2 0 0 0 2 0 0 0 1 0 0 10 2 1131.6248 P52741 P52741 108 117 ZNF134 Zinc finger protein 134 yes yes 2 0.014571 51.286 By MS/MS 1 0 0 0 0 2301 1284 2446 7230 5055 5055 1692;1693 1 RDSDGVDGFEAEGK IHNNRKRRRDSDGVDG DGFEAEGKKDKKDYDN R R D G K K 1 1 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1480.643 Q96KR1 Q96KR1 1052 1065 ZFR Zinc finger RNA-binding protein yes yes 2 8.254E-08 106.19 By matching By MS/MS 1 1 12150000 0 7509800 4640600 2302 1746 2447 7231;7232 5056 5056 2411 1 RDSDGVDGFEAEGKK IHNNRKRRRDSDGVDG GFEAEGKKDKKDYDNF R R D K K D 1 1 0 3 0 0 2 3 0 0 0 2 0 1 0 1 0 0 0 1 0 0 15 2 1608.738 Q96KR1 Q96KR1 1052 1066 ZFR Zinc finger RNA-binding protein yes yes 3 9.5225E-07 89.604 By MS/MS By MS/MS By matching 1 1 1 6714400 2607200 2189600 1917500 2303 1746 2448 7233;7234;7235 5057;5058 5058 2411 2 RDSFDDRGPSLNPVLDYDHGSR WEEKRHFRRDSFDDRG LDYDHGSRSQESGYYD R R D S R S 0 3 1 5 0 0 0 2 1 0 2 0 0 1 2 3 0 0 1 1 0 0 22 2 2517.1633 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 186 207 MATR3 Matrin-3 yes no 4 0.0014792 63.044 By MS/MS By MS/MS By MS/MS 1 1 1 22307000 11704000 3456100 7146300 2304 244 2449 7236;7237;7238 5059;5060;5061 5059 325;326 3 RDSFDNCSLGESSK NAIKRLHKRDSFDNCS CSLGESSKIGISDISS K R D S K I 0 1 1 2 1 0 1 1 0 0 1 1 0 1 0 4 0 0 0 0 0 0 14 1 1600.6787 Q5UIP0 Q5UIP0 1686 1699 RIF1 Telomere-associated protein RIF1 yes yes 2;3 4.3197E-05 92.427 By MS/MS By matching By MS/MS 2 1 2 39601000 15222000 12771000 11607000 2305 1516 2450 7239;7240;7241;7242;7243 5062;5063;5064;5065 5062 2049 4 RDSLEEGELR NSDDRDSKRDSLEEGE SLEEGELRDHCMEITI K R D L R D 0 2 0 1 0 0 3 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 10 1 1202.5891 E9PFJ2;A0A087WYI9;A0A087X1I0;J3KS35;E7ESP2;Q5QPR4;J3QR29;A0A0D9SEI3;Q5QPR3;B7ZVY7;A0A0D9SER5;A0A0D9SEN2;J3QR44;Q9UQ88;P21127 E9PFJ2 45 54 CDK11A;CDK11B;CDC2L1 Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B yes no 2 0.0067968 73.36 By MS/MS By matching By matching 1 1 1 4949300 2073800 1457100 1418300 2306 79 2451 7244;7245;7246 5066 5066 97 1 RDSLTGSSDLYK SNTGSGSRRDSLTGSS TGSSDLYKRTSSSLTP R R D Y K R 0 1 0 2 0 0 0 1 0 0 2 1 0 0 0 3 1 0 1 0 0 0 12 1 1340.6572 H0YDK8;E9PR38;Q5T1Z4;Q5T1Z8;Q14671 H0YDK8 419 430 PUM1 Pumilio homolog 1 yes no 2 2.6368E-38 155.06 By MS/MS By MS/MS By MS/MS 1 1 1 21713000 7257500 8350700 6104900 2307 619 2452 7247;7248;7249 5067;5068;5069 5069 838 3 RDSSDDWEIPDGQITVGQR NRMKTLGRRDSSDDWE GQITVGQRIGSGSFGT R R D Q R I 0 2 0 4 0 2 1 2 0 2 0 0 0 0 1 2 1 1 0 1 0 0 19 1 2173.0036 H7C560;P15056 H7C560 52 70 BRAF Serine/threonine-protein kinase B-raf yes no 3 0.01109 50.883 By matching By MS/MS By matching 1 1 1 3154300 1535500 692180 926660 2308 878 2453 7250;7251;7252 5070 5070 1178;1179 1 RDSSESQLASTESDKPTTGR PCLLMELRRDSSESQL SDKPTTGRVYESDSSN R R D G R V 1 2 0 2 0 1 2 1 0 0 1 1 0 0 1 5 3 0 0 0 0 0 20 2 2151.004 K7EQH1;A0A087WVF1;Q5BIX2;Q96B23 K7EQH1 64 83 C18orf25;ARKL1 Uncharacterized protein C18orf25 yes no 3 1.4331E-34 120.31 By MS/MS By MS/MS By MS/MS 1 1 1 41291000 17374000 13791000 10126000 2309 48 2454 7253;7254;7255 5071;5072;5073 5073 68 3 RDSSSHEETPGSHPLYGHGECK QPTVLTSRRDSSSHEE LYGHGECKWPGCETLC R R D C K W 0 1 0 1 1 0 3 3 3 0 1 1 0 0 2 4 1 0 1 0 0 0 22 1 2466.0618 B7ZBM3;Q8IVH2 B7ZBM3 289 310 FOXP4 Forkhead box protein P4 yes no 4 0.00036783 64.028 By matching By matching By MS/MS 1 1 1 2595900 773110 783980 1038800 2310 379 2455 7256;7257;7258 5074 5074 505;506;507 1 REEGPPPPSPDGASSDAEPEPPSGR TQPSTARRREEGPPPP EPEPPSGRTESPATAA R R E G R T 2 2 0 2 0 0 4 3 0 0 0 0 0 0 8 4 0 0 0 0 0 0 25 1 2514.1259 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 14 38 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 3 0.012329 45.972 By MS/MS By matching 1 1 2951000 1778400 0 1172600 2311 394 2456 7259;7260 5075 5075 526 1 REEPEALYAAVNK IIPGSEVKREEPEALY ALYAAVNKKPTSAAYS K R E N K K 3 1 1 0 0 0 3 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 13 1 1488.7573 A0A087WVF7;Q9NZM3 A0A087WVF7 944 956 ITSN2 Intersectin-2 yes no 2 0.0070574 59.198 By MS/MS 1 506640 506640 0 0 2312 49 2457 7261 5076 5076 3575 1 REEQTDTSDGESVTHHIR SRSGSRERREEQTDTS ESVTHHIRRLNQQPSQ R R E I R R 0 2 0 2 0 1 3 1 2 1 0 0 0 0 0 2 3 0 0 1 0 0 18 1 2095.9519 A2AB27;P36915 A2AB27 42 59 GNL1 Guanine nucleotide-binding protein-like 1 yes no 4 0.00054142 59.579 By matching By MS/MS 1 1 8121000 4864100 3256900 0 2313 299 2458 7262;7263 5077 5077 398;2970;2971 1 RESPSEERLEPK FPRVPLPRRESPSEER SEERLEPKREVKEPRK R R E P K R 0 2 0 0 0 0 4 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 12 2 1455.7318 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 921 932 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 3 0.018804 65.695 By MS/MS By matching 1 1 1592900 991250 0 601640 2314 157 2459 7264;7265 5078 5078 209 1 RESPSPAPK TKHKGTEKRESPSPAP ESPSPAPKPRKVELSE K R E P K P 1 1 0 0 0 0 1 0 0 0 0 1 0 0 3 2 0 0 0 0 0 0 9 1 967.50869 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 443 451 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0055758 93.143 By matching By MS/MS By MS/MS 1 1 1 18373000 5676000 7673700 5023100 2315 322 2460 7266;7267;7268 5079;5080 5079 441 2 RESPSPAPKPR TKHKGTEKRESPSPAP PSPAPKPRKVELSESE K R E P R K 1 2 0 0 0 0 1 0 0 0 0 1 0 0 4 2 0 0 0 0 0 0 11 2 1220.6626 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 443 453 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.0054893 85.45 By MS/MS By MS/MS By MS/MS 1 1 1 96182000 37041000 32173000 26968000 2316 322 2461 7269;7270;7271 5081;5082;5083 5083 441 3 RESSVYDISEHR QSALDFIRRESSVYDI VYDISEHRRSFTHSDC R R E H R R 0 2 0 1 0 0 2 0 1 1 0 0 0 0 0 3 0 0 1 1 0 0 12 1 1476.6957 Q13224 Q13224 927 938 GRIN2B Glutamate receptor ionotropic, NMDA 2B yes yes 2 0.016884 47.532 By MS/MS By matching By matching 1 1 1 5216700 2034500 1586600 1595500 2317 1381 2462 7272;7273;7274 5084 5084 1831;1832 1 RETLRGADSAYYQVGQTGK SPDLSSQKRETLRGAD YQVGQTGKEGTENQGV K R E G K E 2 2 0 1 0 2 1 3 0 0 1 1 0 0 0 1 2 0 2 1 0 0 19 2 2099.0396 Q9Y2I7 Q9Y2I7 1762 1780 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes yes 2 0.017531 41.684 By MS/MS 1 0 0 0 0 2318 1956 2463 7275 5085 5085 2790;3552;3553 1 RFIQSNNLK CPFQGCNRRFIQSNNL FIQSNNLKAHILTHAN R R F L K A 0 1 2 0 0 1 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 0 9 1 1118.6196 Q96MM3 Q96MM3 285 293 ZFP42 Zinc finger protein 42 homolog yes yes 2 0.014444 55.531 By matching By MS/MS 1 1 456830 0 190360 266470 2319 1749 2464 7276;7277 5086 5086 2415 1 RFSEGVLQSPSQDQEK RPTSLVQRRFSEGVLQ SPSQDQEKLGGSLAAL R R F E K L 0 1 0 1 0 3 2 1 0 0 1 1 0 1 1 3 0 0 0 1 0 0 16 1 1833.8857 Q9C0C2 Q9C0C2 427 442 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2;3 0.0027385 62.237 By MS/MS By matching By MS/MS 2 2 3 7781500 2170100 2717400 2894000 2320 1804 2465 7278;7279;7280;7281;7282;7283;7284 5087;5088;5089 5087 2515 3 RFSMEDVSK FQRRQNQRRFSMEDVS FSMEDVSKRLSLPMDI R R F S K R 0 1 0 1 0 0 1 0 0 0 0 1 1 1 0 2 0 0 0 1 0 0 9 1 1097.5175 Q07002 Q07002 85 93 CDK18 Cyclin-dependent kinase 18 yes yes 2 0.0037684 81.676 By matching By MS/MS By matching 2 2 2 4933900 1344500 1916900 1672600 2321 1350 2466;2467 7285;7286;7287;7288;7289;7290 5090;5091 5090 135 1771 2 RFSQDDTSVFTSKMQSR WNKEDLQRRFSQDDTS FTSKMQSRQMGISGKN R R F S R Q 0 2 0 2 0 2 0 0 0 0 0 1 1 2 0 4 2 0 0 1 0 0 17 2 2018.948 D6RA03 D6RA03 1042 1058 RIMS2 yes yes 2 0.012762 41.052 By matching By MS/MS 1 1 464590 249320 0 215270 2322 482 2468 7291;7292 5092 5092 623;624;625;3035;3036 1 RGDFIHVMDNSDPNWWK EDGELGFRRGDFIHVM NSDPNWWKGACHGQTG R R G W K G 0 1 2 3 0 0 0 1 1 1 0 1 1 1 1 1 0 2 0 1 0 0 17 1 2115.9585 P62993 P62993 179 195 GRB2 Growth factor receptor-bound protein 2 yes yes 3 0.0054519 46.121 By MS/MS By matching 1 1 1718000 1345900 0 372050 2323 1316 2469 7293;7294 5093 5093 133 1 RGFSDSGGGPPAK GRGSLLLRRGFSDSGG SGGGPPAKQRDLEGAV R R G A K Q 1 1 0 1 0 0 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 0 13 1 1231.5945 Q9H307;G3V5F0;G3V579 Q9H307 63 75 PNN Pinin yes no 2 0.0032208 76.156 By matching By MS/MS 1 1 5509500 260100 5249400 0 2324 1819 2470 7295;7296 5094 5094 2551 1 RGNDPLTSSPGR ASSPAQRRRGNDPLTS PLTSSPGRSSRRTDAL R R G G R S 0 2 1 1 0 0 0 2 0 0 1 0 0 0 2 2 1 0 0 0 0 0 12 1 1255.6269 P49736;C9J013;C9JZ21;F8WDM3 P49736 19 30 MCM2 DNA replication licensing factor MCM2 yes no 2 1.84E-95 180.95 By MS/MS By MS/MS 1 1 51363000 0 28465000 22898000 2325 1258 2471 7297;7298 5095;5096 5095 1651 2 RGSASGSEPAGDSDR LGEEPKQRRGSASGSE EPAGDSDRG_______ R R G D R G 2 2 0 2 0 0 1 3 0 0 0 0 0 0 1 4 0 0 0 0 0 0 15 1 1447.6288 A0A0C4DG27;P50747 A0A0C4DG27 77 91 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase yes no 2 0.013986 51.265 By MS/MS By matching 1 1 1816300 1022600 0 793660 2326 188 2472 7299;7300 5097 5097 258 1 RGSFSSENYWR VLLPTHRRRGSFSSEN FSSENYWRKSYESSED R R G W R K 0 2 1 0 0 0 1 1 0 0 0 0 0 1 0 3 0 1 1 0 0 0 11 1 1387.6269 K7ER58;Q6P6C2 K7ER58 18 28 ALKBH5 RNA demethylase ALKBH5 yes no 2 1.1748E-06 99.161 By MS/MS By MS/MS 1 1 8162700 8162700 0 0 2327 953 2473 7301;7302 5098;5099 5099 1258 2 RGSGDTSSLIDPDTSLSELR PLSGNSSRRGSGDTSS DTSLSELRDIYDLKDQ R R G L R D 0 2 0 3 0 0 1 2 0 1 3 0 0 0 1 5 2 0 0 0 0 0 20 1 2105.0237 C9JSU1;Q9Y608 C9JSU1 94 113 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 yes no 3 0.0014028 65.25 By MS/MS By MS/MS By MS/MS 1 1 1 3714100 1578900 837220 1298000 2328 446 2474 7303;7304;7305 5100;5101;5102 5101 587;588;589;3026 3 RGSLEMSSDGEPLSR SSATSGGRRGSLEMSS SDGEPLSRMDSEDSIS R R G S R M 0 2 0 1 0 0 2 2 0 0 2 0 1 0 1 4 0 0 0 0 0 0 15 1 1619.7573 Q6ZN18 Q6ZN18 204 218 AEBP2 Zinc finger protein AEBP2 yes yes 3 0.0042788 62.813 By MS/MS By MS/MS 1 1 1036900 0 582830 454060 2329 1565 2475 7306;7307 5103;5104 5103 2124 2 RGSLSNAGDPEIVK DESEEEGRRGSLSNAG AGDPEIVKSPSDPKQY R R G V K S 1 1 1 1 0 0 1 2 0 1 1 1 0 0 1 2 0 0 0 1 0 0 14 1 1441.7525 F5H7V1;B1AKJ5;O43847 F5H7V1 92 105 NRD1 Nardilysin yes no 2 1.602E-12 115.87 By MS/MS By MS/MS 1 1 12226000 0 7164500 5061600 2330 326 2476 7308;7309 5105;5106 5106 453 2 RGSPQTPPGR APSSTPGKRGSPQTPP SPQTPPGRSPLQAPSR K R G G R S 0 2 0 0 0 1 0 2 0 0 0 0 0 0 3 1 1 0 0 0 0 0 10 1 1051.5523 H3BS19;Q96JG9 H3BS19 90 99 ZNF469 Zinc finger protein 469 yes no 2 0.014005 51.612 By MS/MS By matching By MS/MS 2 1 1 3866400 1089300 1825400 951710 2331 842 2477 7310;7311;7312;7313 5107;5108 5108 1132;3184 1 RGSPTTGFIEQK PTPGFSTRRGSPTTGF TTGFIEQKGSPTSAYP R R G Q K G 0 1 0 0 0 1 1 2 0 1 0 1 0 1 1 1 2 0 0 0 0 0 12 1 1319.6834 J3KPS2;Q6ZRV2 J3KPS2 617 628 FAM83H Protein FAM83H yes no 2 7.297E-08 116.51 By MS/MS By matching By matching 1 1 1 4448200 1488300 1726000 1234000 2332 907 2478 7314;7315;7316 5109 5109 1218 1 RGTGQSDDSDIWDDTALIK QEDSVLFRRGTGQSDD WDDTALIKAYDKAVAS R R G I K A 1 1 0 5 0 1 0 2 0 2 1 1 0 0 0 2 2 1 0 0 0 0 19 1 2091.9709 B4DP61;E7EQZ4;Q16637 B4DP61 23 41 SMN2;SMN1 Survival motor neuron protein yes no 3 0.015312 48.677 By MS/MS By matching By matching 1 1 1 3914800 1915600 804440 1194700 2333 346 2479 7317;7318;7319 5110 5110 474;475 1 RHESEEGDSHR SSRSNSRRRHESEEGD SEEGDSHRRHKHKKSK R R H H R R 0 2 0 1 0 0 3 1 2 0 0 0 0 0 0 2 0 0 0 0 0 0 11 1 1337.5709 Q6UN15;H0Y8P7 Q6UN15 551 561 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 3 0.00014166 101.45 By MS/MS By MS/MS 1 1 612150 260000 352150 0 2334 1558 2480 7320;7321 5111;5112 5112 2117 1 RHPDYSVVLLLR MFLYEYARRHPDYSVV YSVVLLLRLAKTYETT R R H L R L 0 2 0 1 0 0 0 0 1 0 3 0 0 0 1 1 0 0 1 2 0 0 12 1 1466.8358 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 361 372 ALB Serum albumin yes no 3 9.6988E-05 88.803 By MS/MS By MS/MS By MS/MS 1 1 1 9558100 4904300 1962700 2691000 + 2335 194 2481 7322;7323;7324 5113;5114;5115;5116;5117;5118 5114 6 RHPYFYAPELLFFAK KYLYEIARRHPYFYAP PELLFFAKRYKAAFTE R R H A K R 2 1 0 0 0 0 1 0 1 0 2 1 0 3 2 0 0 0 2 0 0 0 15 1 1897.9879 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;H7C013 A0A0C4DGB6 169 183 ALB Serum albumin yes no 3;4 7.6759E-06 91.441 By MS/MS By MS/MS By MS/MS 2 1 2 22392000 12776000 4533700 5081900 + 2336 194 2482 7325;7326;7327;7328;7329 5119;5120;5121;5122 5120 4 RHSEVETDSK VGAGKRKRRHSEVETD SEVETDSKKKKMKLPE R R H S K K 0 1 0 1 0 0 2 0 1 0 0 1 0 0 0 2 1 0 0 1 0 0 10 1 1186.5578 Q9NX58 Q9NX58 274 283 LYAR Cell growth-regulating nucleolar protein yes yes 2 0.0024135 83.204 By MS/MS By matching By matching 1 1 1 1624500 632370 533910 458230 2337 1873 2483 7330;7331;7332 5123 5123 2642 1 RHSGSYLVTSV SSGTQSPKRHSGSYLV GSYLVTSV________ K R H S V - 0 1 0 0 0 0 0 1 1 0 1 0 0 0 0 3 1 0 1 2 0 0 11 1 1204.62 P25054 P25054 2833 2843 APC Adenomatous polyposis coli protein yes yes 2 0.014547 59.975 By matching By matching By MS/MS 1 1 1 1652500 550230 567950 534320 2338 1193 2484 7333;7334;7335 5124 5124 1542 1 RHSVTLPSSK PAGGGFPRRHSVTLPS SVTLPSSKFHQNQLLS R R H S K F 0 1 0 0 0 0 0 0 1 0 1 1 0 0 1 3 1 0 0 1 0 0 10 1 1110.6146 Q07352;G3V2D5;G3V515;G3V2P5 Q07352 52 61 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 yes no 3 0.010837 54.005 By MS/MS 1 0 0 0 0 2339 1351 2485 7336 5125 5125 3352 1 RICDLREDSEVSK EEADRGAKRICDLRED REDSEVSKSKEGSPSW K R I S K S 0 2 0 2 1 0 2 0 0 1 1 1 0 0 0 2 0 0 0 1 0 0 13 2 1605.7781 Q7Z2Z1;H0YN97 Q7Z2Z1 1789 1801 TICRR Treslin yes no 2 0.015899 40.496 By matching By matching By MS/MS 1 1 1 739340 295780 174740 268810 2340 1577 2486 7337;7338;7339 5126 5126 0 RIDFIPVSPAPSPTR VEKSASPKRIDFIPVS SPAPSPTRGIGKQCFS K R I T R G 1 2 0 1 0 0 0 0 0 2 0 0 0 1 4 2 1 0 0 1 0 0 15 1 1651.9046 Q96E09 Q96E09 136 150 FAM122A Protein FAM122A yes yes 3 0.0081009 40.237 By matching By matching By MS/MS 1 1 1 1344700 534500 469310 340920 2341 1730 2487 7340;7341;7342 5127 5127 2375;2376;3476 1 RIDISPSTFR KKSPEIHRRIDISPST DISPSTFRKHGLAHDE R R I F R K 0 2 0 1 0 0 0 0 0 2 0 0 0 1 1 2 1 0 0 0 0 0 10 1 1190.6408 Q9Y2W1 Q9Y2W1 678 687 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 4.5908E-09 139.19 By MS/MS By MS/MS By MS/MS 2 1 1 43614000 17595000 12265000 13754000 2342 1960 2488 7343;7344;7345;7346 5128;5129;5130;5131 5130 2801 4 RIDISPSTLR QKSPEIHRRIDISPST DISPSTLRKHTRLAGE R R I L R K 0 2 0 1 0 0 0 0 0 2 1 0 0 0 1 2 1 0 0 0 0 0 10 1 1156.6564 E9PK91;Q9NYF8;E9PQN2;E9PKI6 E9PK91 654 663 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 8.1302E-122 190.35 By MS/MS By MS/MS By MS/MS 1 1 1 119440000 42431000 39510000 37503000 2343 596 2489 7347;7348;7349 5132;5133;5134 5132 796 3 RISQSQPVR IIRNPQQRRISQSQPV ISQSQPVRGRDEEQDD R R I V R G 0 2 0 0 0 2 0 0 0 1 0 0 0 0 1 2 0 0 0 1 0 0 9 1 1069.5992 E7EMW7;O95071 E7EMW7 1541 1549 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.0056869 113.67 By MS/MS By MS/MS By matching 1 1 1 10674000 4145800 3670100 2858100 2344 521 2490 7350;7351;7352 5135;5136 5136 663 2 RISQVSSGETEYNPTEAR RKLWRSSRRISQVSSG EYNPTEAR________ R R I A R - 1 2 1 0 0 1 3 1 0 1 0 0 0 0 1 3 2 0 1 1 0 0 18 1 2022.9607 H7C3Y7;H0Y764;Q6ZNJ1 H7C3Y7 1076 1093 NBEAL2 Neurobeachin-like protein 2 yes no 3 0.0056529 57.936 By matching By MS/MS By matching 1 1 1 2193400 847820 770740 574810 2345 766 2491 7353;7354;7355 5137 5137 1047 1 RISTSDILSEK DKEQNLTRRISTSDIL TSDILSEKKLGEDEEE R R I E K K 0 1 0 1 0 0 1 0 0 2 1 1 0 0 0 3 1 0 0 0 0 0 11 1 1247.6721 O60293 O60293 350 360 ZFC3H1 Zinc finger C3H1 domain-containing protein yes yes 2 0.00018366 107.17 By MS/MS By matching By matching 1 1 1 11835000 3208700 4997100 3629000 2346 1018 2492 7356;7357;7358 5138 5138 1361;1362 1 RITHISAEQKR DSNKTENRRITHISAE HISAEQKRRFNIKLGF R R I K R R 1 2 0 0 0 1 1 0 1 2 0 1 0 0 0 1 1 0 0 0 0 0 11 2 1337.7528 A0A0C4DG26;Q9NP71 A0A0C4DG26 557 567 MLXIPL Carbohydrate-responsive element-binding protein yes no 2 0.018665 47.261 By matching By MS/MS 1 1 3520800 1782100 1738700 0 2347 187 2493 7359;7360 5139 5139 257;2934 0 RKPEDVLDDDDAGSAPLK IIFIYEKRRKPEDVLD DAGSAPLKSSGQHQND R R K L K S 2 1 0 5 0 0 1 1 0 0 2 2 0 0 2 1 0 0 0 1 0 0 18 2 1939.9487 A0A087WUV8;P35613 A0A087WUV8 153 170 BSG Basigin yes no 3 9.3778E-10 93.34 By MS/MS By matching By matching 1 1 1 7494500 2943300 2653700 1897500 2348 42 2494 7361;7362;7363 5140 5140 54 1 RKPSPEPEGEVGPPK AVARTARKRKPSPEPE EGEVGPPKINGEAQPW K R K P K I 0 1 0 0 0 0 3 2 0 0 0 2 0 0 5 1 0 0 0 1 0 0 15 2 1602.8366 Q7Z5L9 Q7Z5L9 357 371 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 0.0037866 70.802 By MS/MS By MS/MS 1 1 4441000 0 2853600 1587500 2349 1584 2495 7364;7365 5141;5142 5142 2157 2 RKSLSDSESDDSK GKEKDGTKRKSLSDSE DSESDDSKSKKKRDAA K R K S K S 0 1 0 3 0 0 1 0 0 0 1 2 0 0 0 5 0 0 0 0 0 0 13 2 1452.6692 Q13185;S4R2Y4 Q13185 91 103 CBX3 Chromobox protein homolog 3 yes no 3 0.015351 66.939 By matching By MS/MS By matching 1 1 1 12009000 4329000 5414600 2265800 2350 1380 2496 7366;7367;7368 5143 5143 1826;1827;1828;1829 1 RLAAAEETAVSPR KRVWSLERRLAAAEET EETAVSPRKSPRPAGP R R L P R K 4 2 0 0 0 0 2 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 13 1 1369.7314 Q9BUH6 Q9BUH6 138 150 C9orf142 Protein PAXX yes yes 2 0.010535 62.469 By matching By matching By MS/MS 1 1 1 12226000 5953700 3595700 2676300 2351 1783 2497 7369;7370;7371 5144 5144 2476 1 RLASTSDIEEKENR YVAPTIPRRLASTSDI DIEEKENRDSSSLRTS R R L N R D 1 2 1 1 0 0 3 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 14 2 1646.8224 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 504 517 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 3 0.0033525 78.78 By MS/MS By MS/MS By MS/MS 1 1 1 16613000 7424100 4996200 4192700 2352 986 2498 7372;7373;7374 5145;5146;5147 5145 1316;1317 3 RLDFTGNLIEDIEDGTFSK FADIPNLRRLDFTGNL IEDGTFSKLSLLEELS R R L S K L 0 1 1 3 0 0 2 2 0 2 2 1 0 2 0 1 2 0 0 0 0 0 19 1 2169.059 P20774;Q5TBF5 P20774 147 165 OGN Mimecan yes no 3 4.1734E-30 96.391 By MS/MS By MS/MS By MS/MS 1 1 1 1765000 0 1765000 0 2353 1181 2499 7375;7376;7377 5148;5149;5150 5148 3 RLDSSCLESVK ESRNRVKRRLDSSCLE SSCLESVKQKCVKSCN R R L V K Q 0 1 0 1 1 0 1 0 0 0 2 1 0 0 0 3 0 0 0 1 0 0 11 1 1292.6395 F5GZ90;Q9NZJ0 F5GZ90 512 522 DTL Denticleless protein homolog yes no 2 0.00016567 107.53 By MS/MS By MS/MS By MS/MS 1 1 1 12559000 4282000 4337100 3939600 2354 640 2500 7378;7379;7380 5151;5152;5153 5151 860;861 3 RLDVVAGSVTVLSGR RRLAELERRLDVVAGS SVTVLSGRRGTELGGA R R L G R R 1 2 0 1 0 0 0 2 0 0 2 0 0 0 0 2 1 0 0 4 0 0 15 1 1527.8733 A0A0C4DFX3;Q9Y6C2 A0A0C4DFX3 368 382 EMILIN1 EMILIN-1 yes no 3 0.0012186 58.159 By MS/MS 1 316030 316030 0 0 2355 182 2501 7381 5154;5155;5156 5154 3 RLLSVGDGTR PAKGHPERRLLSVGDG LSVGDGTRVGMGARTP R R L T R V 0 2 0 1 0 0 0 2 0 0 2 0 0 0 0 1 1 0 0 1 0 0 10 1 1072.5989 H3BTF6;H3BND0;Q7L2K0 H3BTF6 123 132 C16orf59 Uncharacterized protein C16orf59 yes no 2 0.0070256 71.176 By matching By MS/MS By MS/MS 1 1 2 228720000 50017000 52234000 126470000 2356 821 2502 7382;7383;7384;7385 5157;5158 5157 1104;3180 2 RLSLDSSCLDSSR SSGGLQSKRLSLDSSC SSCLDSSRDTDNGTPF K R L S R D 0 2 0 2 1 0 0 0 0 0 3 0 0 0 0 5 0 0 0 0 0 0 13 1 1494.7097 A0A0C4DH56;Q9BWT3 A0A0C4DH56 191 203 PAPOLG Poly(A) polymerase gamma yes no 2 0.0040364 73.022 By MS/MS By matching By matching 1 1 1 7567500 2519500 2498800 2549200 2357 209 2503 7386;7387;7388 5159 5159 292 1 RLSLPADIR SPVRDINKRLSLPADI LSLPADIRLPEGYLEK K R L I R L 1 2 0 1 0 0 0 0 0 1 2 0 0 0 1 1 0 0 0 0 0 0 9 1 1039.6138 H0YBX5;E5RJM2;E5RGN0;A0A087WZU2;Q00536;E5RIY8;E5RIU4;F8VZY6;F8VQZ9;F5H6Z0;Q00537 H0YBX5 77 85 CDK16;CDK17 Cyclin-dependent kinase 16;Cyclin-dependent kinase 17 no no 2 0.005452 89.805 By MS/MS By MS/MS 1 1 6995100 0 3437500 3557700 2358 88;658 2504 7389;7390 5160;5161 5161 106 2 RLSNPCIQR ASSMRQARRLSNPCIQ LSNPCIQRSIPPVLQN R R L Q R S 0 2 1 0 1 1 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 9 1 1142.5979 Q5RGS4 Q5RGS4 306 314 PLEKHA1 yes yes 2 0.016252 68.676 By matching By matching By MS/MS 1 1 1 6187500 2480100 2025200 1682200 2359 1494 2505 7391;7392;7393 5162 5162 2010 1 RLSPSASPPR SSPPRKTRRLSPSASP SPSASPPRRRHRPSPP R R L P R R 1 2 0 0 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 0 0 0 10 1 1066.5883 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 382 391 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.00099875 91.307 By matching By MS/MS By MS/MS 1 2 2 27698000 9009500 10099000 8589800 2360 322 2506;2507 7394;7395;7396;7397;7398 5163;5164;5165;5166 5163 436;437;438 4 RLSQPESAEK SSSSVQARRLSQPESA SQPESAEKHVTQRLQP R R L E K H 1 1 0 0 0 1 2 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 10 1 1143.5884 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 650 659 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0001481 113.54 By MS/MS By MS/MS By MS/MS 1 1 1 33298000 11360000 14857000 7081600 2361 532 2508 7399;7400;7401 5167;5168;5169;5170;5171;5172 5168 687 6 RLSQPESAEKHVTQR SSSSVQARRLSQPESA AEKHVTQRLQPERGSP R R L Q R L 1 2 0 0 0 2 2 0 1 0 1 1 0 0 1 2 1 0 0 1 0 0 15 2 1764.9231 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 650 664 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.0086468 62.648 By matching By MS/MS 1 1 2244600 0 647890 1596700 2362 532 2509 7402;7403 5173 5173 687 1 RLSSLRASTSK QEQIAKRRRLSSLRAS SLRASTSKSESSQK__ R R L S K S 1 2 0 0 0 0 0 0 0 0 2 1 0 0 0 4 1 0 0 0 0 0 11 2 1204.6888 A2A3R5;P62753 A2A3R5 202 212 RPS6 40S ribosomal protein S6 yes no 2 0.00025395 91.076 By MS/MS By MS/MS By MS/MS 1 1 1 41949000 11545000 19241000 11162000 2363 298 2510 7404;7405;7406 5174;5175;5176 5174 395;396;397 3 RLSSTSLASGHSVR NCSGARKRRLSSTSLA LASGHSVRLGTSESLP R R L V R L 1 2 0 0 0 0 0 1 1 0 2 0 0 0 0 5 1 0 0 1 0 0 14 1 1456.7746 B4DTS2;Q9BZL6;M0QZ82 B4DTS2 195 208 PRKD2 Serine/threonine-protein kinase;Serine/threonine-protein kinase D2 yes no 3 0.0011578 66.977 By MS/MS By MS/MS By matching 1 1 1 2362200 1099500 700520 562210 2364 348 2511 7407;7408;7409 5177;5178 5178 478;479;480;2996 2 RLSTHSPFR PRPSEWDKRLSTHSPF LSTHSPFRTLNINGQI K R L F R T 0 2 0 0 0 0 0 0 1 0 1 0 0 1 1 2 1 0 0 0 0 0 9 1 1099.5887 P11171;Q4VB86;A0A1B0GWG0 P11171 707 715 EPB41 Protein 4.1 yes no 3 0.0057401 62.799 By matching By matching By MS/MS 1 1 1 4240500 1601600 1282400 1356500 2365 1143 2512 7410;7411;7412 5179 5179 1486;3289 1 RLSTSPDVIQGHQPR RAQQQSQRRLSTSPDV VIQGHQPRDNHTDHGG R R L P R D 0 2 0 1 0 2 0 1 1 1 1 0 0 0 2 2 1 0 0 1 0 0 15 1 1689.8911 Q9Y385 Q9Y385 264 278 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 yes yes 3 4.0449E-09 103.71 By MS/MS By matching By MS/MS 1 1 1 14352000 5727100 4473300 4151800 2366 1963 2513 7413;7414;7415 5180;5181 5180 2807;2808;3556 2 RMSDEFVDSFKK QRYGRELRRMSDEFVD EFVDSFKKGLPRPKSA R R M K K G 0 1 0 2 0 0 1 0 0 0 0 2 1 2 0 2 0 0 0 1 0 0 12 2 1487.7079 F5H3B1;F5H1R6;Q92934 F5H3B1 31 42 BAD Bcl2-associated agonist of cell death yes no 3 0.0051706 56.793 By matching By matching By MS/MS 1 1 1 2027800 833280 620900 573610 2367 646 2514 7416;7417;7418 5182 5182 45 870 1 RMSGEPIQTVESIR GYHSASNRRMSGEPIQ IQTVESIRVPGKGNRG R R M I R V 0 2 0 0 0 1 2 1 0 2 0 0 1 0 1 2 1 0 0 1 0 0 14 1 1601.8195 Q5VT52 Q5VT52 1097 1110 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 3 0.0055912 43.955 By MS/MS By matching 1 1 598210 352190 0 246010 2368 1518 2515 7419;7420 5183 5183 147 2056 1 RMSPKPELTEEQK MASSSQRKRMSPKPEL PELTEEQKQEIREAFD K R M Q K Q 0 1 0 0 0 1 3 0 0 0 1 2 1 0 2 1 1 0 0 0 0 0 13 2 1571.7977 P41208 P41208 18 30 CETN2 Centrin-2 yes yes 3 6.6849E-05 89.356 By MS/MS By matching 1 1 1624000 0 866500 757530 2369 1234 2516 7421;7422 5184 5184 1591 1 RNEGVVGGEDYEEVDR SYAPRHSRRNEGVVGG EDYEEVDRYSRQGRVA R R N D R Y 0 2 1 2 0 0 4 3 0 0 0 0 0 0 0 0 0 0 1 3 0 0 16 1 1821.8129 H3BQQ2;Q86UK7 H3BQQ2 241 256 ZNF598 Zinc finger protein 598 yes no 2;3 1.0038E-07 92.427 By MS/MS By MS/MS By MS/MS 3 2 2 16955000 7835300 5421600 3698500 2370 836 2517 7423;7424;7425;7426;7427;7428;7429 5185;5186;5187;5188;5189 5188 3720 5 RNEGVVGGEDYEEVDRYSR SYAPRHSRRNEGVVGG EEVDRYSRQGRVARAG R R N S R Q 0 3 1 2 0 0 4 3 0 0 0 0 0 0 0 1 0 0 2 3 0 0 19 2 2228.0094 H3BQQ2;Q86UK7 H3BQQ2 241 259 ZNF598 Zinc finger protein 598 yes no 3 0.0037948 56.215 By matching By matching By MS/MS 1 1 1 19255000 6692400 8141900 4420800 2371 836 2518 7430;7431;7432 5190 5190 3720 1 RNSCNVGGGGGGFK PGGGGGKRRNSCNVGG GGGGGGFKHPAFKRRR R R N F K H 0 1 2 0 1 0 0 6 0 0 0 1 0 1 0 1 0 0 0 1 0 0 14 1 1365.6208 Q7L2J0 Q7L2J0 150 163 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2 2.7754E-08 109.1 By MS/MS By MS/MS By MS/MS 1 1 1 7921800 2921400 3391000 1609500 2372 1572 2519 7433;7434;7435 5191;5192;5193 5191 2137 3 RNSFTPLSSSNTIR NQTPVRMRRNSFTPLS LSSSNTIRRPRNYSVG R R N I R R 0 2 2 0 0 0 0 0 0 1 1 0 0 1 1 4 2 0 0 0 0 0 14 1 1578.8114 O60825 O60825 464 477 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes yes 3 0.0057756 64.313 By MS/MS By matching By MS/MS 1 1 1 2424300 1035700 566550 822110 2373 1027 2520 7436;7437;7438 5194;5195 5194 1374;3248 2 RNSLTGEEGQLAR PRRAGALRRNSLTGEE GEEGQLARVSNWPLYC R R N A R V 1 2 1 0 0 1 2 2 0 0 2 0 0 0 0 1 1 0 0 0 0 0 13 1 1429.7274 Q9BX95 Q9BX95 110 122 SGPP1 Sphingosine-1-phosphate phosphatase 1 yes yes 2;3 7.1321E-13 122.5 By MS/MS By MS/MS By MS/MS 2 2 2 33990000 13338000 10960000 9692100 2374 1792 2521 7439;7440;7441;7442;7443;7444 5196;5197;5198;5199 5196 2487;3494 4 RNSSEASSGDFLDLK LESSGLQRRNSSEASS SGDFLDLKGEGDIHEN R R N L K G 1 1 1 2 0 0 1 1 0 0 2 1 0 1 0 4 0 0 0 0 0 0 15 1 1624.7693 J3KSH8;J3KT51;Q9UK76 J3KSH8 39 53 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 3 1.0246E-45 149.72 By matching By MS/MS By MS/MS 1 1 1 19989000 4488300 7423500 8077100 2375 917 2522 7445;7446;7447 5200;5201 5200 1229 2 RNSTTFPSR QAEAPSARRNSTTFPS NSTTFPSRHGLLLPAS R R N S R H 0 2 1 0 0 0 0 0 0 0 0 0 0 1 1 2 2 0 0 0 0 0 9 1 1064.5363 Q96E09 Q96E09 60 68 FAM122A Protein FAM122A yes yes 2 0.0050188 95.483 By MS/MS By matching By MS/MS 1 1 1 6430900 2140700 2727300 1562800 2376 1730 2523 7448;7449;7450 5202;5203 5202 2377 2 RPAAAAAAGSASPR PGRKGSGKRPAAAAAA AAGSASPRSWDEAEAQ K R P P R S 7 2 0 0 0 0 0 1 0 0 0 0 0 0 2 2 0 0 0 0 0 0 14 1 1252.6636 Q96S55 Q96S55 142 155 WRNIP1 ATPase WRNIP1 yes yes 2 1.2923E-12 117.48 By MS/MS By MS/MS 1 1 9988000 0 5521400 4466600 2377 1758 2524 7451;7452 5204;5205;5206 5206 2430 3 RPAEATSSPTSPERPR KKKDKEHRRPAEATSS PTSPERPRHHHHDSDS R R P P R H 2 3 0 0 0 0 2 0 0 0 0 0 0 0 4 3 2 0 0 0 0 0 16 2 1737.8758 Q9BU76 Q9BU76 210 225 MMTAG2 Multiple myeloma tumor-associated protein 2 yes yes 3 0.0044511 47.618 By MS/MS By matching By matching 1 1 1 9563600 2164000 4248900 3150700 2378 1781 2525 7453;7454;7455 5207 5207 2474;3488 1 RPASPSSPEHLPATPAESPAQR LNKLKSPKRPASPSSP PAESPAQRFEARIEDG K R P Q R F 4 2 0 0 0 1 2 0 1 0 1 0 0 0 6 4 1 0 0 0 0 0 22 1 2282.1404 Q9H7L9 Q9H7L9 231 252 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 3 0.001764 52.541 By matching By MS/MS By matching 1 1 1 9053600 3770300 4958300 324960 2379 1830 2526 7456;7457;7458 5208 5208 2568;2569 1 RPASVSSSAAVEHEQR PTDLGAHKRPASVSSS AAVEHEQREAAAKEKQ K R P Q R E 3 2 0 0 0 1 2 0 1 0 0 0 0 0 1 4 0 0 0 2 0 0 16 1 1709.8445 Q7Z5L9 Q7Z5L9 237 252 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 3 3.7263E-08 99.343 By MS/MS By MS/MS By MS/MS 1 1 1 13076000 6269200 4023000 2784200 2380 1584 2527 7459;7460;7461 5209;5210;5211 5210 2159;2160 3 RPATADSPKPSAK PPPRASSKRPATADSP DSPKPSAKKQKKSSSK K R P A K K 3 1 0 1 0 0 0 0 0 0 0 2 0 0 3 2 1 0 0 0 0 0 13 2 1324.7099 Q03111 Q03111 286 298 MLLT1 Protein ENL yes yes 3 0.0030657 80.508 By matching By MS/MS By MS/MS 1 1 1 11604000 3623500 5081000 2899400 2381 1337 2528 7462;7463;7464 5212;5213 5212 1752;1753 2 RPCFSALEVDETYVPK CTESLVNRRPCFSALE VDETYVPKEFNAETFT R R P P K E 1 1 0 1 1 0 2 0 0 0 1 1 0 1 2 1 1 0 1 2 0 0 16 1 1909.9244 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 509 524 ALB Serum albumin yes no 3 5.3588E-06 86.548 By MS/MS By MS/MS By MS/MS 1 1 1 2679700 1219000 467600 993110 + 2382 194 2529 7465;7466;7467 5214;5215;5216;5217 5217 4 RPDDVPLSLSPSKR RARLAALKRPDDVPLS LSLSPSKRACASPSAQ K R P K R A 0 2 0 2 0 0 0 0 0 0 2 1 0 0 3 3 0 0 0 1 0 0 14 2 1565.8526 F8WDB4;Q9UFC0 F8WDB4 82 95 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 3 0.014919 60.561 By MS/MS By MS/MS By matching 1 1 1 6043700 2486500 2156200 1401100 2383 699 2530 7468;7469;7470 5218;5219 5218 939 2 RPDHSGGSPSPPTSEPAR EVAPPAHRRPDHSGGS PPTSEPARSGHRGNRA R R P A R S 1 2 0 1 0 0 1 2 1 0 0 0 0 0 5 4 1 0 0 0 0 0 18 1 1830.8609 Q8TAD8 Q8TAD8 45 62 SNIP1 Smad nuclear-interacting protein 1 yes yes 3 0.012459 50.172 By MS/MS 1 0 0 0 0 2384 1665 2531 7471 5220 5220 2285;2286 1 RPDPDSDEDEDYER HEASGFARRPDPDSDE DEDEDYERERRKRSMG R R P E R E 0 2 0 5 0 0 3 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 14 1 1736.6762 Q5W011;Q5W010;H0Y6J6;Q5W012;Q96I25 Q5W011 150 163 RBM17 Splicing factor 45 yes no 2 1.9003E-13 127.3 By MS/MS By MS/MS By MS/MS 1 1 1 20193000 7227400 7134200 5831900 2385 763 2532 7472;7473;7474 5221;5222;5223 5223 1044 3 RPDPDSDEDEDYERER HEASGFARRPDPDSDE DEDYERERRKRSMGGA R R P E R R 0 3 0 5 0 0 4 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 16 2 2021.8199 Q5W011;Q5W010;H0Y6J6;Q5W012;Q96I25 Q5W011 150 165 RBM17 Splicing factor 45 yes no 3 0.005788 67.136 By MS/MS By matching By matching 1 1 1 32764000 14180000 9584300 9000500 2386 763 2533 7475;7476;7477 5224 5224 1044 1 RPEGPGAQAPSSPR LTDSGPERRPEGPGAQ AQAPSSPRVTEAPCYP R R P P R V 2 2 0 0 0 1 1 2 0 0 0 0 0 0 4 2 0 0 0 0 0 0 14 1 1405.7062 P40222 P40222 504 517 TXLNA Alpha-taxilin yes yes 2;3 6.1824E-06 103.79 By MS/MS By MS/MS By MS/MS 2 2 2 64766000 21812000 24818000 18136000 2387 1230 2534 7478;7479;7480;7481;7482;7483 5225;5226;5227;5228;5229;5230 5230 1589;1590 6 RPESPSEISPIK TWNSQFGKRPESPSEI PSEISPIKGSVRTGLF K R P I K G 0 1 0 0 0 0 2 0 0 2 0 1 0 0 3 3 0 0 0 0 0 0 12 1 1338.7143 Q7Z5K2 Q7Z5K2 218 229 WAPAL Wings apart-like protein homolog yes yes 2 0.007325 66.023 By MS/MS By MS/MS By MS/MS 2 2 2 9473200 3136400 3463000 2873800 2388 1583 2535;2536 7484;7485;7486;7487;7488;7489 5231;5232;5233 5233 2155;2156 3 RPGAPSLSPAPR PPPARSPRRPGAPSLS PSLSPAPRSGELGLPG R R P P R S 2 2 0 0 0 0 0 1 0 0 1 0 0 0 4 2 0 0 0 0 0 0 12 1 1204.6677 Q5QP82 Q5QP82 56 67 DCAF10 DDB1- and CUL4-associated factor 10 yes yes 2 0.01634 56.951 By MS/MS By matching By matching 1 1 1 3898500 2023600 1045500 829370 2389 1493 2537 7490;7491;7492 5234 5234 2008;2009 1 RPGFSPTSHR FQPSSPTRRPGFSPTS GFSPTSHRLLPTP___ R R P H R L 0 2 0 0 0 0 0 1 1 0 0 0 0 1 2 2 1 0 0 0 0 0 10 1 1140.5788 H0Y4Q6;Q8WUA4 H0Y4Q6 406 415 GTF3C2 General transcription factor 3C polypeptide 2 yes no 3 0.0015065 93.348 By MS/MS By MS/MS By matching 1 1 1 3270200 1362800 1045700 861760 2390 752 2538 7493;7494;7495 5235;5236 5235 1029 2 RPGPGTLYDVPR YDVPPGLRRPGPGTLY GTLYDVPRERVLPPEV R R P P R E 0 2 0 1 0 0 0 2 0 0 1 0 0 0 3 0 1 0 1 1 0 0 12 1 1326.7044 H3BN62;P56945 H3BN62 208 219 BCAR1 Breast cancer anti-estrogen resistance protein 1 yes no 2 0.0015167 102.06 By matching By MS/MS By MS/MS 1 1 1 4960400 1993200 1650600 1316500 2391 818 2539 7496;7497;7498 5237;5238 5238 3179;3717 2 RPMEEDGEEKSPSK TYAITPMKRPMEEDGE GEEKSPSKKKKKIQKK K R P S K K 0 1 0 1 0 0 4 1 0 0 0 2 1 0 2 2 0 0 0 0 0 0 14 2 1617.7305 Q12906 Q12906 372 385 ILF3 Interleukin enhancer-binding factor 3 yes yes 2;3 4.1273E-13 116.79 By MS/MS By MS/MS By MS/MS 2 4 3 116320000 30543000 54909000 30864000 2392 1368 2540;2541 7499;7500;7501;7502;7503;7504;7505;7506;7507 5239;5240;5241;5242;5243;5244;5245;5246;5247;5248 5240 137 1808 10 RPMSSPEMK SGTKPANKRPMSSPEM PMSSPEMKSAPKKSKA K R P M K S 0 1 0 0 0 0 1 0 0 0 0 1 2 0 2 2 0 0 0 0 0 0 9 1 1061.4998 H7C1C4;A6NEM2;P51610 H7C1C4 592 600 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.0054561 115.91 By matching By MS/MS By MS/MS 2 2 2 9703900 3229600 3458100 3016100 2393 304 2542;2543 7508;7509;7510;7511;7512;7513 5249;5250;5251;5252 5251 24 404;405 4 RPNEDSDEDEEK AVLTKAVKRPNEDSDE DSDEDEEKGAVVPPVH K R P E K G 0 1 1 3 0 0 4 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 12 1 1461.5856 H0YE74;Q12996 H0YE74 60 71 CSTF3 Cleavage stimulation factor subunit 3 yes no 2 0.0066583 70.628 By MS/MS By MS/MS By MS/MS 1 1 1 4028600 1181000 1706600 1140900 2394 789 2544 7514;7515;7516 5253;5254;5255 5255 1074 3 RPNEDSDEDEEKGAVVPPVHDIYR AVLTKAVKRPNEDSDE PPVHDIYRARQQKRIR K R P Y R A 1 2 1 4 0 0 4 1 1 1 0 1 0 0 3 1 0 0 1 3 0 0 24 2 2765.2893 H0YE74;Q12996 H0YE74 60 83 CSTF3 Cleavage stimulation factor subunit 3 yes no 4 2.1312E-07 79.455 By MS/MS By MS/MS 1 1 20880000 12640000 0 8239700 2395 789 2545 7517;7518 5256;5257 5257 1074 2 RPPSPDVIVLSDNEQPSSPR HSDMKSERRPPSPDVI NEQPSSPRVNGLTTVA R R P P R V 0 2 1 2 0 1 1 0 0 1 1 0 0 0 5 4 0 0 0 2 0 0 20 1 2189.1077 Q86YP4;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4 97 116 GATAD2A Transcriptional repressor p66-alpha yes no 3 0.00091107 64.16 By MS/MS By MS/MS By MS/MS 1 1 1 9290300 2708600 3836600 2745100 2396 1603 2546 7519;7520;7521 5258;5259;5260;5261 5261 2191;2192;2193 4 RPPSPEPSTK QEEEERKRRPPSPEPS PSPEPSTKVSEEAESQ R R P T K V 0 1 0 0 0 0 1 0 0 0 0 1 0 0 4 2 1 0 0 0 0 0 10 1 1094.572 A0A087WUZ3;Q01082 A0A087WUZ3 2101 2110 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 3.9338E-09 139.76 By MS/MS By MS/MS By MS/MS 1 1 1 23578000 9026600 8185400 6366300 2397 45 2547 7522;7523;7524 5262;5263;5264;5265;5266;5267;5268;5269 5263 63;64 8 RPPTPCSDPER LDLTKKGKRPPTPCSD TPCSDPERKRFRFNSE K R P E R K 0 2 0 1 1 0 1 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 11 1 1310.6037 Q9BW71 Q9BW71 81 91 HIRIP3 HIRA-interacting protein 3 yes yes 2 1.4578E-05 112.62 By MS/MS By MS/MS By matching 2 2 2 9111700 3337400 3408600 2365600 2398 1787 2548;2549 7525;7526;7527;7528;7529;7530 5270;5271;5272 5272 2479;3491 3 RPRDSPTLSNSGIR ERVVERRRRPRDSPTL TLSNSGIRATSRTAKQ R R P I R A 0 3 1 1 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 0 0 0 14 2 1554.8227 Q9HD20 Q9HD20 895 908 ATP13A1 Manganese-transporting ATPase 13A1 yes yes 3 0.015778 59.796 By MS/MS By matching 1 1 828010 359410 468600 0 2399 1842 2550 7531;7532 5273 5273 2586 1 RPSLPSSPSPGLPK EDQSEDKKRPSLPSSP SPSPGLPKASATSATL K R P P K A 0 1 0 0 0 0 0 1 0 0 2 1 0 0 5 4 0 0 0 0 0 0 14 1 1418.7882 H3BSN4;H3BQC4;O43294 H3BSN4 118 131 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein yes no 2 0.015774 52.725 By MS/MS 1 2225100 0 2225100 0 2400 834 2551 7533 5274 5274 1122;1123;1124 1 RPSPQPSPR SYSPVERRRPSPQPSP PSPQPSPRDQQSSSSE R R P P R D 0 2 0 0 0 1 0 0 0 0 0 0 0 0 4 2 0 0 0 0 0 0 9 1 1020.5465 Q9UQ35;I3L4U6 Q9UQ35 2700 2708 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 0.0033202 109.11 By MS/MS By MS/MS By MS/MS 1 1 2 13423000 4682700 4983400 3756500 2401 1945 2552 7534;7535;7536;7537 5275;5276;5277;5278 5275 2764 4 RPSQEQSASASSGQPQAPLNR EKAEERPRRPSQEQSA QPQAPLNRERPESPMV R R P N R E 3 2 1 0 0 4 1 1 0 0 1 0 0 0 3 5 0 0 0 0 0 0 21 1 2195.0679 A0A0A0MT60;Q5T1M5 A0A0A0MT60 979 999 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 3 0.0033408 67.252 By matching By matching By MS/MS 1 1 1 8601800 3108300 3239800 2253800 2402 163 2553 7538;7539;7540 5279 5279 216 1 RPSVGSQSNQAGQGK PGVFLTQRRPSVGSQS SNQAGQGKRPKKGLAT R R P G K R 1 1 1 0 0 3 0 3 0 0 0 1 0 0 1 3 0 0 0 1 0 0 15 1 1499.7441 H0Y3N9;Q9UPP1 H0Y3N9 887 901 PHF8 Histone lysine demethylase PHF8 yes no 2;3 0.005459 61.097 By MS/MS By MS/MS By MS/MS 1 2 1 3048800 1423800 1104100 520900 2403 748 2554 7541;7542;7543;7544 5280;5281;5282 5282 1025 2 RQLQEDQENNLQDNQTSNSSPCR ESKEKTLKRQLQEDQE TSNSSPCRSNVGKGNI K R Q C R S 0 2 4 2 1 5 2 0 0 0 2 0 0 0 1 3 1 0 0 0 0 0 23 1 2760.2118 Q92576 Q92576 1595 1617 PHF3 PHD finger protein 3 yes yes 3 0.013665 46.178 By MS/MS By matching 1 1 1191000 690880 500120 0 2404 1697 2555 7545;7546 5283 5283 2329 1 RQSILFSTEV AIPAPDSKRQSILFST SILFSTEV________ K R Q E V - 0 1 0 0 0 1 1 0 0 1 1 0 0 1 0 2 1 0 0 1 0 0 10 1 1178.6295 P11274 P11274 1262 1271 BCR Breakpoint cluster region protein yes yes 2 0.016391 62.408 By MS/MS By matching By matching 1 1 1 1899800 692540 636040 571260 2405 1144 2556 7547;7548;7549 5284 5284 1487 1 RQSIPEEFK PDGALAVRRQSIPEEF QSIPEEFKGSTVVELM R R Q F K G 0 1 0 0 0 1 2 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 9 1 1132.5877 F5H3G9;F5H4N6;Q9Y3R0 F5H3G9 67 75 GRIP1 Glutamate receptor-interacting protein 1 yes no 2 0.011853 77.597 By MS/MS By MS/MS 1 1 2716400 1498600 0 1217800 2406 650 2557 7550;7551 5285;5286 5285 874 2 RQSPEPSPVTLGR ESKRRCRKRQSPEPSP PSPVTLGRRSSGRQGG K R Q G R R 0 2 0 0 0 1 1 1 0 0 1 0 0 0 3 2 1 0 0 1 0 0 13 1 1422.7579 Q9NRL2 Q9NRL2 1411 1423 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes yes 3 0.0035239 73.279 By matching By MS/MS By MS/MS 1 1 1 2102400 745020 907810 449520 2407 1851 2558 7552;7553;7554 5287;5288 5288 2605 2 RQSPLPPQK ________________ QSPLPPQKKKPRPPPA K R Q Q K K 0 1 0 0 0 2 0 0 0 0 1 1 0 0 3 1 0 0 0 0 0 0 9 1 1049.5982 Q01105;B2REB7 Q01105 5 13 SET Protein SET yes no 2 0.0032149 103.43 By MS/MS By MS/MS By matching 1 1 1 7687200 2668600 2328500 2690100 2408 1329 2559 7555;7556;7557 5289;5290;5291 5289 1736 3 RQSPSPSTRPIR GASSSPQRRQSPSPST SPSTRPIRRVSRTPEP R R Q I R R 0 3 0 0 0 1 0 0 0 1 0 0 0 0 3 3 1 0 0 0 0 0 12 2 1380.7586 A9Z1X7;Q8IYB3;E9PCT1 A9Z1X7 720 731 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0061404 95.57 By MS/MS By matching By MS/MS 1 1 1 13136000 4037900 5295500 3802800 2409 322 2560 7558;7559;7560 5292;5293 5293 431;432;433;2982 2 RQSSGSATNVASTPDNR SLGRIRTRRQSSGSAT VASTPDNRGRSRAKVV R R Q N R G 2 2 2 1 0 1 0 1 0 0 0 0 0 0 1 4 2 0 0 1 0 0 17 1 1746.8245 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 425 441 CLASP1 CLIP-associating protein 1 yes no 2 1.4259E-10 94.402 By MS/MS By matching By matching 1 1 1 6180700 2363900 2137400 1679500 2410 692 2561 7561;7562;7563 5294 5294 923 1 RQYHFESNQR AEYIAQARRQYHFESN YHFESNQRTCNMTVLS R R Q Q R T 0 2 1 0 0 2 1 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 10 1 1363.6381 P56589 P56589 54 63 PEX3 Peroxisomal biogenesis factor 3 yes yes 2 0.012941 42.287 By MS/MS 1 11162000 0 0 11162000 2411 1300 2562 7564 5295 5295 3815 1 RRDSDGVDGFEAEGK NIHNNRKRRRDSDGVD DGFEAEGKKDKKDYDN R R R G K K 1 2 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 0 15 2 1636.7441 Q96KR1 Q96KR1 1051 1065 ZFR Zinc finger RNA-binding protein yes yes 3 0.0026622 73.76 By MS/MS By matching By matching 1 1 1 13524000 5137200 4240300 4146200 2412 1746 2563 7565;7566;7567 5296 5296 2411 1 RRSPPPGPDGHAK QQLEKKQRRRSPPPGP PGPDGHAKKMRPGEAT R R R A K K 1 2 0 1 0 0 0 2 1 0 0 1 0 0 4 1 0 0 0 0 0 0 13 2 1370.7167 P57081 P57081 389 401 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes yes 3 0.014341 56.872 By matching By MS/MS 1 1 1969400 99338 0 1870000 2413 1301 2564 7568;7569 5297 5297 1711 0 RRSPSPYYSR DYYSRSYRRRSPSPYY SPSPYYSRGGYRSRSR R R R S R G 0 3 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 2 0 0 0 10 2 1267.6422 H7BXF3;Q13595;P62995 H7BXF3 101 110 TRA2B;TRA2A Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta yes no 3 0.0032649 70.68 By MS/MS By MS/MS By matching 1 1 1 17326000 6528200 6418700 4379600 2414 852 2565 7570;7571;7572 5298;5299 5299 1149;1150 2 RRTPSPPPR RTPTPPPRRRTPSPPP RTPSPPPRRRSPSPRR R R R P R R 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 9 2 1062.6047 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 588 596 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.0098262 53.869 By MS/MS By MS/MS By matching 1 1 1 25330000 9665100 9990700 5674400 2415 322 2566 7573;7574;7575 5300;5301 5300 442;2985 2 RSALQSINEWAAQTTDGK SKINFRDKRSALQSIN AAQTTDGKLPEVTKDV K R S G K L 3 1 1 1 0 2 1 1 0 1 1 1 0 0 0 2 2 1 0 0 0 0 18 1 1974.9759 P50454;E9PQ34;E9PNX1;E9PK86;E9PMI5;E9PR70;E9PPV6 P50454 167 184 SERPINH1 Serpin H1 yes no 2 0.015681 44.564 By MS/MS 1 0 0 0 0 2416 1269 2567 7576 5302 5302 1 RSASASHQADIK GRPPKSARRSASASHQ ASHQADIKEARREVEV R R S I K E 3 1 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 12 1 1269.6426 C9JXK0;Q14739 C9JXK0 96 107 LBR Lamin-B receptor yes no 3 0.0097144 64.675 By matching By matching By MS/MS 1 1 1 37246000 13824000 14638000 8784500 2417 453 2568 7577;7578;7579 5303 5303 596;597 1 RSDSASSEPVGIYQGFEKK QVTQRASRRSDSASSE IYQGFEKKTGVAGEDM R R S K K T 1 1 0 1 0 1 2 2 0 1 0 2 0 1 1 4 0 0 1 1 0 0 19 2 2084.0174 Q05655 Q05655 301 319 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 3 0.0017791 58.712 By matching By MS/MS 1 1 796950 0 360970 435980 2418 1345 2569 7580;7581 5304 5304 1765;1766;1767;1768;3823 1 RSDSLLSFR FPSEPGLRRSDSLLSF SDSLLSFRLDLDLGPS R R S F R L 0 2 0 1 0 0 0 0 0 0 2 0 0 1 0 3 0 0 0 0 0 0 9 1 1079.5724 Q00587 Q00587 189 197 CDC42EP1 Cdc42 effector protein 1 yes yes 2 0.017794 67.456 By MS/MS By matching 1 1 3133800 0 1468100 1665700 2419 1326 2570 7582;7583 5305 5305 1733 1 RSDSPENKYSDSTGHSK SPPNKMLRRSDSPENK SDSTGHSKAKNVHTHR R R S S K A 0 1 1 2 0 0 1 1 1 0 0 2 0 0 1 5 1 0 1 0 0 0 17 2 1893.8453 Q9BTA9;E9PMZ7;C9JMU2;C9JVK6;C9JD58;J3QTA0;A0A0A0MRT2 Q9BTA9 61 77 WAC WW domain-containing adapter protein with coiled-coil yes no 4 0.0039144 52.273 By matching By MS/MS By MS/MS 1 1 1 2725900 654730 871430 1199700 2420 1777 2571 7584;7585;7586 5306;5307 5306 2464;3905 2 RSDSVSASER PEANRGLRRSDSVSAS DSVSASERAGPSRARH R R S E R A 1 2 0 1 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 1 0 0 10 1 1092.516 O43719 O43719 384 393 HTATSF1 HIV Tat-specific factor 1 yes yes 2 0.0021109 92.295 By MS/MS By MS/MS By matching 1 1 1 16947000 6227000 5157000 5563000 2421 1014 2572 7587;7588;7589 5308;5309 5309 1354 2 RSEACPCQPDSGSPLPAEEEKR MKRSIEGRRSEACPCQ LPAEEEKRLSAESGLS R R S K R L 2 2 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 22 2 2499.1118 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 411 432 SCRIB Protein scribble homolog yes no 3 0.0070367 56.428 By MS/MS By matching By matching 1 1 1 4878900 2717200 1347900 813820 2422 226 2573 7590;7591;7592 5310 5310 309;310 1 RSEDESETEDEEEKSQEDQEQK EKEKKRKKRSEDESET SQEDQEQKRKRRKTRQ K R S Q K R 0 1 0 3 0 3 9 0 0 0 0 2 0 0 0 3 1 0 0 0 0 0 22 2 2683.0853 Q7Z6P5;J3KQ69;P25205 Q7Z6P5 162 183 MCM3 DNA replication licensing factor MCM3 yes no 3 0.0076956 50.189 By matching By MS/MS By matching 1 1 1 10728000 3321500 5733200 1673200 2423 909 2574 7593;7594;7595 5311 5311 1221;3214 1 RSESSGILPNTTDMR LQTHPPCRRSESSGIL LPNTTDMRLRPGTRRD R R S M R L 0 2 1 1 0 0 1 1 0 1 1 0 1 0 1 3 2 0 0 0 0 0 15 1 1662.7995 Q92667;I3L2A2;I3L2N7;I3L0K6 Q92667 104 118 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 3 0.013332 47.088 By MS/MS 1 0 0 0 0 2424 1704 2575 7596 5312 5312 2336;2337;2338 1 RSFSKEVEER RARTPATKRSFSKEVE FSKEVEERSRERPSQP K R S E R S 0 2 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 10 2 1265.6364 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1021 1030 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 3 0.0057585 87.831 By MS/MS By matching By matching 1 1 1 9045900 3223500 2725000 3097300 2425 550 2576 7597;7598;7599 5313 5313 724;725 1 RSFTAADSK ANELNARRRSFTAADS SFTAADSKDEEVKVAP R R S S K D 2 1 0 1 0 0 0 0 0 0 0 1 0 1 0 2 1 0 0 0 0 0 9 1 981.48796 K7ERV4;Q8N2U9 K7ERV4 109 117 PQLC1 PQ-loop repeat-containing protein 1 yes no 2 0.012287 54.157 By MS/MS 1 0 0 0 0 2426 954 2577 7600 5314 5314 1259;3225 1 RSISASDLTFK FSKCTKLRRSISASDL SASDLTFKIHGDEDLS R R S F K I 1 1 0 1 0 0 0 0 0 1 1 1 0 1 0 3 1 0 0 0 0 0 11 1 1223.651 J3KP97;Q5T9S5 J3KP97 1406 1416 CCDC18 Coiled-coil domain-containing protein 18 yes no 2 0.00573 60.161 By MS/MS 1 2913500 0 2913500 0 2427 905 2578 7601 5315 5315 1214;1215 1 RSLGSTDFSPMFNIQSNAHKK SQHRQACRRSLGSTDF IQSNAHKKEKDSTLFT R R S K K E 1 1 2 1 0 1 0 1 1 1 1 2 1 2 1 4 1 0 0 0 0 0 21 2 2364.1645 S4R3Z8;F2Z2X7;Q5JVX6 S4R3Z8 158 178 C1orf141 yes no 3 0.014457 41.513 By MS/MS By matching By matching 1 1 1 30582000 10318000 11261000 9003000 2428 627 2579 7602;7603;7604 5316 5316 848;849;3106 1 RSLTNSHLEK FISDRESRRSLTNSHL LTNSHLEKKKCDEYIP R R S E K K 0 1 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 10 1 1183.6309 F8VX12;F8VX04;Q9H2H9 F8VX12 51 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 3 0.00086837 94.09 By MS/MS By MS/MS By MS/MS 1 1 2 9671000 2878000 3192400 3600600 2429 680 2580 7605;7606;7607;7608 5317;5318;5319 5317 908;909;3130 3 RSPATYGHSQK SRIQNAAKRSPATYGH ATYGHSQKKHKCSVYY K R S Q K K 1 1 0 0 0 1 0 1 1 0 0 1 0 0 1 2 1 0 1 0 0 0 11 1 1230.6105 H0Y2M0;A2VDJ0 H0Y2M0 744 754 KIAA0922 Transmembrane protein 131-like yes no 2 0.0042551 66.267 By MS/MS 1 3808600 0 0 3808600 2430 300 2581 7609 5320 5320 399 1 RSPGTGDFSRNSNASNK NRRSAACKRSPGTGDF RNSNASNKSVDYSRSQ K R S N K S 1 2 3 1 0 0 0 2 0 0 0 1 0 1 1 4 1 0 0 0 0 0 17 2 1793.8405 C9J9Z3;C9JFB6;U3KPS7;O95447;C9JRD7;C9JIJ8;C9J293;C9J5D2;C9J198 C9J9Z3 31 47 LCA5L Lebercilin-like protein yes no 3 0.015223 44.312 By MS/MS 1 0 0 0 0 2431 421 2582 7610 5321 5321 561;562 1 RSPSPYYSR YYSRSYRRRSPSPYYS SPSPYYSRGGYRSRSR R R S S R G 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 3 0 0 2 0 0 0 9 1 1111.5411 H7BXF3;Q13595;P62995;H7C2L4 H7BXF3 102 110 TRA2B;TRA2A Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta yes no 2 0.013359 56.569 By matching By MS/MS By matching 1 1 1 3427700 1363600 1145700 918440 2432 852 2583 7611;7612;7613 5322 5322 1149;1150 1 RSPVPAQIAITVPK DSQNLNSRRSPVPAQI QIAITVPKTWKKPKDR R R S P K T 2 1 0 0 0 1 0 0 0 2 0 1 0 0 3 1 1 0 0 2 0 0 14 1 1475.8824 A0A0A0MSA7;A0A0U1RQK7;O43432 A0A0A0MSA7 493 506 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 2 0.015645 52.823 By matching By MS/MS By matching 1 1 1 2155400 683850 771550 699980 2433 148 2584 7614;7615;7616 5323 5323 198 1 RSSLLNAK GAHKKRARRSSLLNAK RSSLLNAKKLYEDAQM R R S A K K 1 1 1 0 0 0 0 0 0 0 2 1 0 0 0 2 0 0 0 0 0 0 8 1 887.51886 B7Z7Y1;E9PCH4;Q8TEU7;D6RE77 B7Z7Y1 1092 1099 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 2 0.014206 110.84 By MS/MS By matching By matching 1 1 1 3991700 1432600 1340100 1218900 2434 375 2585 7617;7618;7619 5324 5324 500 1 RSSPESDRQVHSR DSRSHSSRRSSPESDR SDRQVHSRSGSFDSRD R R S S R S 0 3 0 1 0 1 1 0 1 0 0 0 0 0 1 4 0 0 0 1 0 0 13 2 1539.7502 Q5T200 Q5T200 1277 1289 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 4 0.0052663 59.265 By matching By MS/MS 1 1 811620 199040 0 612590 2435 1501 2586 7620;7621 5325 5325 2028 1 RSSSLQR FKFLADYKRSSSLQRR KRSSSLQRRVKSIPGL K R S Q R R 0 2 0 0 0 1 0 0 0 0 1 0 0 0 0 3 0 0 0 0 0 0 7 1 832.45151 E9PDJ4;Q8NF50 E9PDJ4 425 431 DOCK8 Dedicator of cytokinesis protein 8 yes no 2 0.014162 80.455 By MS/MS By matching By matching 1 1 1 8597100 2782000 2827200 2987900 2436 566 2587 7622;7623;7624 5326 5326 751 1 RSSTNRSSSK RRSRSSSRRSSTNRSS STNRSSSK________ R R S S K - 0 2 1 0 0 0 0 0 0 0 0 1 0 0 0 5 1 0 0 0 0 0 10 2 1108.5585 A0A096LP13 A0A096LP13 55 64 yes yes 2 0.0043491 58.674 By MS/MS 1 7864000 0 0 7864000 2437 120 2588 7625 5327;5328 5327 158;159;2906 2 RSSTSSEPTPTVK RQGMGLSRRSSTSSEP SEPTPTVKTLIKSFDS R R S V K T 0 1 0 0 0 0 1 0 0 0 0 1 0 0 2 4 3 0 0 1 0 0 13 1 1375.6943 F8WAN1;Q69YQ0 F8WAN1 830 842 SPECC1L-ADORA2A;SPECC1L Cytospin-A yes no 2 8.7826E-15 132.24 By MS/MS By MS/MS By MS/MS 2 1 2 6098500 2301800 1453200 2343500 2438 694 2589 7626;7627;7628;7629;7630 5329;5330;5331;5332 5330 929;3136 4 RSSTVAPAQPDGAESEWTDVETR ESPNGRKRRSSTVAPA EWTDVETRCSVAVEMR R R S T R C 3 2 0 2 0 1 3 1 0 0 0 0 0 0 2 3 3 1 0 2 0 0 23 1 2488.1466 H7BYN4;Q02241 H7BYN4 902 924 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 3 0.00022 75.103 By matching By MS/MS By matching 1 1 1 5920900 2268900 2456100 1196000 2439 856 2590 7631;7632;7633 5333 5333 1155 1 RSTQESLTAGGTDLKR APATRVTRRSTQESLT AGGTDLKRELHPPATS R R S K R E 1 2 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 16 2 1718.8911 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 303 318 LRRC41 Leucine-rich repeat-containing protein 41 yes no 3 1.1648E-18 119 By MS/MS By MS/MS By matching 1 1 1 4867900 1708400 1507900 1651600 2440 28 2591 7634;7635;7636 5334;5335 5334 31;2871 2 RSTSPIIGSPPVR LSERALPRRSTSPIIG IIGSPPVRAVPIGTPP R R S V R A 0 2 0 0 0 0 0 1 0 2 0 0 0 0 3 3 1 0 0 1 0 0 13 1 1365.7728 Q86TB9 Q86TB9 176 188 PATL1 Protein PAT1 homolog 1 yes yes 2 0.0067229 55.011 By MS/MS By matching 1 1 1810700 1611700 0 198940 2441 1590 2592 7637;7638 5336 5336 2169;2170;2171;3444 1 RSTSTLYSQFQTAESENR SGSRQAARRSTSTLYS QTAESENRSYEGTLYK R R S N R S 1 2 1 0 0 2 2 0 0 0 1 0 0 1 0 4 3 0 1 0 0 0 18 1 2103.9821 G5E933;O95248;H0Y5W8 G5E933 1746 1763 SBF1 Myotubularin-related protein 5 yes no 3 0.0044208 47.223 By MS/MS 1 399090 399090 0 0 2442 733 2593 7639 5337 5337 3152 1 RSWLTVLLPTRPAEDWPSK LYRSWKDKRSWLTVLL PAEDWPSKVPGLPSPQ K R S S K V 1 2 0 1 0 0 1 0 0 0 3 1 0 0 3 2 2 2 0 1 0 0 19 2 2251.2113 A0A0U1RQB7 A0A0U1RQB7 18 36 yes yes 4 0.017939 40.493 By MS/MS 1 1349900 1349900 0 0 2443 247 2594 7640 5338 5338 331 1 RSYLTPVRDEESESQR TTEVRERRRSYLTPVR DEESESQRKARSRQAR R R S Q R K 0 3 0 1 0 1 3 0 0 0 1 0 0 0 1 3 1 0 1 1 0 0 16 2 1950.9395 O14974;H0YIS4;H0YHI8 O14974 667 682 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.015696 42.556 By MS/MS 1 0 0 0 0 2444 986 2595 7641 5339 5339 1318;1319;1320;3745 1 RTDALTSSPGR SSPGRSSRRTDALTSS ALTSSPGRDLPPFEDE R R T G R D 1 2 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 11 1 1159.5945 P49736;C9J013;C9JZ21;F8WDM3 P49736 34 44 MCM2 DNA replication licensing factor MCM2 yes no 2 0.0050704 86.911 By matching By MS/MS By MS/MS 1 1 1 11545000 4141200 3836900 3567200 2445 1258 2596 7642;7643;7644 5340;5341;5342 5341 1652;1653;3330 3 RTGLQCETGK QQEVDEERRTGLQCET GLQCETGKRHSIKELE R R T G K R 0 1 0 0 1 1 1 2 0 0 1 1 0 0 0 0 2 0 0 0 0 0 10 1 1148.5608 H7C3M9;Q86W67 H7C3M9 114 123 FAM228A Protein FAM228A yes no 2 0.0080544 56.551 By MS/MS 1 0 0 0 0 2446 871 2597 7645 5343 5343 3192 1 RTPSDDEEDNLFAPPK TLKEKKERRTPSDDEE DNLFAPPKLTDEDFSP R R T P K L 1 1 1 3 0 0 2 0 0 0 1 1 0 1 3 1 1 0 0 0 0 0 16 1 1829.8432 F8W7U3;J3KP36;E7ESD2;A0A0A0MR88;A0A096LPC5;Q9Y4E1;Q641Q2 F8W7U3 242 257 FAM21A;FAM21C WASH complex subunit FAM21C;WASH complex subunit FAM21A yes no 3 0.0056491 45.207 By MS/MS By matching 1 1 505130 374210 130920 0 2447 121 2598 7646;7647 5344 5344 2907 1 RTSFSTSDVSK ALTPTEERRTSFSTSD FSTSDVSKLLPSLAKA R R T S K L 0 1 0 1 0 0 0 0 0 0 0 1 0 1 0 4 2 0 0 1 0 0 11 1 1213.5939 M0R300;M0R0P8;Q13459 M0R300 1352 1362 MYO9B Unconventional myosin-IXb yes no 2 0.011352 64.827 By MS/MS By MS/MS 1 2 3555800 0 1529700 2026100 2448 966 2599 7648;7649;7650 5345;5346 5346 1272;1273 2 RTSLSAEDAEVTK DLLFMSHKRTSLSAED AEDAEVTKAFEEDIET K R T T K A 2 1 0 1 0 0 2 0 0 0 1 1 0 0 0 2 2 0 0 1 0 0 13 1 1405.7049 Q9P2D1 Q9P2D1 2531 2543 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 2 0.013044 58.831 By matching By MS/MS By matching 1 1 1 2161700 647780 846170 667760 2449 1894 2600 7651;7652;7653 5347 5347 2671;2672 1 RTSMGGTQQQFVEGVR RAHQDTQRRTSMGGTQ QQFVEGVRMEEIVEGC R R T V R M 0 2 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 16 1 1779.8686 B4DGU4;P35222 B4DGU4 543 558 CTNNB1 Catenin beta-1 yes no 3 2.4967E-19 125.51 By MS/MS By MS/MS By MS/MS 1 2 2 7784600 1640300 2987100 3157200 2450 343 2601;2602 7654;7655;7656;7657;7658 5348;5349;5350;5351 5350 27 472;2995 4 RTSPQVLGSILK PKAYELEKRTSPQVLG QVLGSILKSGTTSESG K R T L K S 0 1 0 0 0 1 0 1 0 1 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1297.7718 Q7Z417 Q7Z417 570 581 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 2 0.0022451 82.831 By MS/MS By matching By matching 1 1 1 2620500 1334900 713740 571810 2451 1579 2603 7659;7660;7661 5352 5352 2149 1 RTSTPVIMEGVQEETDTR KLEREHKRRTSTPVIM VQEETDTRDVKRQVER R R T T R D 0 2 0 1 0 1 3 1 0 1 0 0 1 0 1 1 4 0 0 2 0 0 18 1 2047.9844 Q8NFC6 Q8NFC6 657 674 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.0015639 56.9 By matching By MS/MS By matching 1 1 1 2149300 578250 733730 837270 2452 1660 2604 7662;7663;7664 5353 5353 2276;3464;3465 1 RVNDAEPGSPEAPQGK RRRPRRRRRVNDAEPG SPEAPQGKRRKADGED R R V G K R 2 1 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 16 1 1650.7962 Q8N8A6 Q8N8A6 75 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 2;3 0.003192 65.225 By MS/MS By matching By MS/MS 2 2 2 8548100 3454900 2805900 2287200 2453 1640 2605 7665;7666;7667;7668;7669;7670 5354;5355;5356 5356 2246 3 RVNNGNTAPEDSSPAKK ARALNESKRVNNGNTA EDSSPAKKTRRCQRQE K R V K K T 2 1 3 1 0 0 1 1 0 0 0 2 0 0 2 2 1 0 0 1 0 0 17 2 1783.8813 E9PJ27;G3V167;Q9UGN5 E9PJ27 22 38 PARP2 Poly [ADP-ribose] polymerase 2 yes no 3 0.0032636 73.593 By MS/MS By MS/MS By MS/MS 2 2 2 7129100 2450000 2936300 1742800 2454 590 2606;2607 7671;7672;7673;7674;7675;7676 5357;5358;5359;5360;5361;5362 5358 33;34;35 781;782 6 RVPCAYDK VFAKAIQKRVPCAYDK RVPCAYDKTALALEVG K R V D K T 1 1 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 8 1 1007.4859 P46109 P46109 246 253 CRKL Crk-like protein yes yes 2 0.01676 45.972 By MS/MS 1 0 0 0 0 2455 1244 2608 7677 5363 5363 3789 1 RVPSPTPAPK VQPEVALKRVPSPTPA PSPTPAPKEAVREGRP K R V P K E 1 1 0 0 0 0 0 0 0 0 0 1 0 0 4 1 1 0 0 1 0 0 10 1 1048.6029 Q9UQ35 Q9UQ35 2578 2587 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 0.00032258 115.29 By MS/MS By matching By MS/MS 2 2 2 39492000 14102000 12831000 12560000 2456 1945 2609 7678;7679;7680;7681;7682;7683 5364;5365;5366 5366 3541 3 RVSEVEEEKEPVPQPLPSDDTR RLRGRGRRRVSEVEEE PLPSDDTRVENMDISD R R V T R V 0 2 0 2 0 1 5 0 0 0 1 1 0 0 4 2 1 0 0 3 0 0 22 2 2535.2453 O43290 O43290 446 467 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 3 3.5822E-10 84.89 By MS/MS By matching By MS/MS 1 1 1 17078000 5772200 6452200 4854000 2457 1004 2610 7684;7685;7686 5367;5368 5368 1337 2 RVSLEPHQGPGTPESK ITTRQQRKRVSLEPHQ GPGTPESKKATSCFPR K R V S K K 0 1 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 16 1 1717.8747 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1973 1988 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0054946 45.347 By MS/MS By matching By MS/MS 1 1 1 2206700 918450 748560 539650 2458 77 2611 7687;7688;7689 5369;5370 5369 2887 2 RVSLSEIGFGK KPLSRRLRRVSLSEIG LSEIGFGKLETYIKLD R R V G K L 0 1 0 0 0 0 1 2 0 1 1 1 0 1 0 2 0 0 0 1 0 0 11 1 1191.6612 H0YBX5;E5RJM2;E5RGN0;A0A087WZU2;Q00536 H0YBX5 111 121 CDK16 Cyclin-dependent kinase 16 yes no 2 2.373E-05 124.81 By MS/MS By MS/MS By MS/MS 1 1 1 5083200 2105000 1359100 1619000 2459 88 2612 7690;7691;7692 5371;5372;5373 5371 107 3 RVSLVGADDLR PQAEGPPKRVSLVGAD LVGADDLRKMQEEEAR K R V L R K 1 2 0 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 2 0 0 11 1 1199.6622 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1295 1305 SCRIB Protein scribble homolog yes no 2 0.0037802 80.371 By MS/MS By matching By matching 1 1 1 17258000 6174100 6242300 4841700 2460 226 2613 7693;7694;7695 5374 5374 311 1 RVSVCAETYNPDEEEEDTDPR PVPSRFNRRVSVCAET EEEDTDPRVIHPKTDE R R V P R V 1 2 1 3 1 0 5 0 0 0 0 0 0 0 2 1 2 0 1 2 0 0 21 1 2510.0503 P13861 P13861 97 117 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes yes 3 3.3431E-06 82.665 By matching By MS/MS By MS/MS 1 1 1 57029000 21425000 20171000 15433000 2461 1157 2614 7696;7697;7698 5375;5376 5375 1505 2 RVTQEQGVSLLEDK SALREPSRRVTQEQGV GVSLLEDKKESREDET R R V D K K 0 1 0 1 0 2 2 1 0 0 2 1 0 0 0 1 1 0 0 2 0 0 14 1 1600.842 M0R300;M0R0P8;Q13459 M0R300 1181 1194 MYO9B Unconventional myosin-IXb no no 1 NaN 0 0 0 0 2462 966 0 RWDQTADQTPGATPK QPPSKRKRRWDQTADQ QTPGATPKKLSSWDQA R R W P K K 2 1 0 2 0 2 0 1 0 0 0 1 0 0 2 0 3 1 0 0 0 0 15 1 1670.8012 O75533 O75533 199 213 SF3B1 Splicing factor 3B subunit 1 yes yes 2;3 3.4386E-05 84.403 By matching By MS/MS By MS/MS 2 2 2 8698100 2411500 3337000 2949600 2463 1035 2615;2616 7699;7700;7701;7702;7703;7704 5377;5378;5379 5377 3257;3258 3 RYEDDGISDDEIEGK ________________ SDDEIEGKRTFDLEEK R R Y G K R 0 1 0 4 0 0 3 2 0 2 0 1 0 0 0 1 0 0 1 0 0 0 15 1 1739.7486 I3VM54;Q9Y2K7 I3VM54 4 18 KDM2A Lysine-specific demethylase 2A yes no 2 0.0050152 62.104 By MS/MS By MS/MS By matching 1 1 1 5136500 1712900 1844300 1579300 2464 894 2617 7705;7706;7707 5380;5381 5380 1201 2 RYPSSISSSPQK EQRSTQTRRYPSSISS SISSSPQKDLTQAKNG R R Y Q K D 0 1 0 0 0 1 0 0 0 1 0 1 0 0 2 5 0 0 1 0 0 0 12 1 1335.6783 Q14157;F8W726 Q14157 601 612 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 5.2294E-08 122.46 By MS/MS By MS/MS By MS/MS 4 4 4 65315000 24932000 23812000 16572000 2465 1405 2618;2619 7708;7709;7710;7711;7712;7713;7714;7715;7716;7717;7718;7719 5382;5383;5384;5385;5386 5382 1862;1863;1864 4 RYSPPIQR RRRSPSPRRYSPPIQR RYSPPIQRRYSPSPPP R R Y Q R R 0 2 0 0 0 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 0 8 1 1015.5563 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 604 611 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 8.722E-09 146.11 By MS/MS By MS/MS By MS/MS 1 1 1 75786000 24029000 28488000 23270000 2466 322 2620 7720;7721;7722 5387;5388;5389 5387 443 3 RYSPSPPPK RYSPPIQRRYSPSPPP YSPSPPPKRRTASPPP R R Y P K R 0 1 0 0 0 0 0 0 0 0 0 1 0 0 4 2 0 0 1 0 0 0 9 1 1027.5451 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 612 620 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0021813 88.101 By MS/MS By MS/MS By MS/MS 1 1 1 21837000 6428900 8784800 6623000 2467 322 2621 7723;7724;7725 5390;5391;5392;5393;5394;5395;5396 5390 444;445 7 RYWEEETVPTTAGASPGPPR QTKRKKPRRYWEEETV GASPGPPRNKKNRELR R R Y P R N 2 2 0 0 0 0 3 2 0 0 0 0 0 0 4 1 3 1 1 1 0 0 20 1 2200.0549 O15213 O15213 27 46 WDR46 WD repeat-containing protein 46 yes yes 3 0.011256 49.655 By MS/MS By MS/MS By matching 1 1 1 1418000 551470 485740 380830 2468 993 2622 7726;7727;7728 5397;5398 5398 1326 2 SAADSISESVPVGPK AMDISEGRSAADSISE ESVPVGPKVRDGPGKY R S A P K V 2 0 0 1 0 0 1 1 0 1 0 1 0 0 2 4 0 0 0 2 0 0 15 0 1442.7253 P45974 P45974 779 793 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes yes 2 0.014945 47.037 By matching By MS/MS By MS/MS 1 1 1 2031000 763370 658240 609410 2469 1240 2623 7729;7730;7731 5399;5400 5400 1602;1603 2 SADFTNFDPR DSIKTKGKSADFTNFD DFTNFDPRGLLPESLD K S A P R G 1 1 1 2 0 0 0 0 0 0 0 0 0 2 1 1 1 0 0 0 0 0 10 0 1168.5149 P00918 P00918 172 181 CA2 Carbonic anhydrase 2 yes yes 2 0.0070305 87.476 By MS/MS By MS/MS 1 1 612750 0 612750 0 2470 1082 2624 7732;7733 5401;5402 5402 2 SADFVVEAIGDDVGTLGFSVEGPSQAK LEGGVVGKSADFVVEA VEGPSQAKIECDDKGD K S A A K I 3 0 0 3 0 1 2 4 0 1 1 1 0 2 1 3 1 0 0 4 0 0 27 0 2694.3025 Q5HY54;Q60FE5;P21333;A0A087WWY3 Q5HY54 594 620 FLNA Filamin-A yes no 3 1.0284E-05 66.556 By MS/MS By matching By matching 1 1 1 11566000 7429900 1883800 2252700 2471 1182 2625 7734;7735;7736 5403 5403 1 SADSENALSVQER LDPRGRLRSADSENAL NALSVQERNVPTKSPS R S A E R N 2 1 1 1 0 1 2 0 0 0 1 0 0 0 0 3 0 0 0 1 0 0 13 0 1404.6481 J3KRN4;J3QRB6;Q99759 J3KRN4 333 345 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 2 0.0070553 60.55 By matching By MS/MS By MS/MS 1 1 1 1972100 525240 738710 708180 2472 915 2626 7737;7738;7739 5404;5405 5404 1226;1227 2 SADVSPTTEGVK PFKLKVIRSADVSPTT SPTTEGVKRRVKSPGS R S A V K R 1 0 0 1 0 0 1 1 0 0 0 1 0 0 1 2 2 0 0 2 0 0 12 0 1189.5826 A0A0J9YX34;Q9C040 A0A0J9YX34 424 435 TRIM2 Tripartite motif-containing protein 2 yes no 2 0.008613 59.153 By matching By MS/MS By matching 1 1 1 1071200 462430 455080 153730 2473 239 2627 7740;7741;7742 5406 5406 322 1 SAESPSWTPAEHVAK KPVRAKSKSAESPSWT TPAEHVAKRIESRHSA K S A A K R 3 0 0 0 0 0 2 0 1 0 0 1 0 0 2 3 1 1 0 1 0 0 15 0 1595.758 Q13415 Q13415 196 210 ORC1 Origin recognition complex subunit 1 yes yes 2 0.0078927 51.998 By matching By matching By MS/MS 1 1 1 1704400 599410 640020 464960 2474 1388 2628 7743;7744;7745 5407 5407 1843 1 SAGEEEDGPVLTDEQK PSLDQWHRSAGEEEDG PVLTDEQKSRIQAMKP R S A Q K S 1 0 0 2 0 1 4 2 0 0 1 1 0 0 1 1 1 0 0 1 0 0 16 0 1702.7534 F5GYV5;H7BZV4;A0A0C4DG62;F8WCT1;F5H7X4;Q66PJ3 F5GYV5 140 155 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 2 1.7092E-07 93.106 By matching By matching By MS/MS 1 1 1 33412000 10164000 13558000 9690400 2475 191 2629 7746;7747;7748 5408 5408 261 1 SAGGRPGSGPQLGTGR GWDMISQRSAGGRPGS GPQLGTGRGTLRLRSR R S A G R G 1 2 0 0 0 1 0 6 0 0 1 0 0 0 2 2 1 0 0 0 0 0 16 1 1453.7386 K7EM11;K7ESN1;O14908 K7EM11 20 35 GIPC1 PDZ domain-containing protein GIPC1 yes no 2 0.012506 50.722 By matching By matching By MS/MS 1 1 1 3204100 1218200 1105100 880870 2476 944 2630 7749;7750;7751 5409 5409 1251 1 SAPASPTHPGLMSPR PFGPLSSRSAPASPTH HPGLMSPRSGGLQTPE R S A P R S 2 1 0 0 0 0 0 1 1 0 1 0 1 0 4 3 1 0 0 0 0 0 15 0 1504.7456 P85037 P85037 416 430 FOXK1 Forkhead box protein K1 yes yes 2 0.0024944 65.949 By MS/MS By MS/MS By MS/MS 1 1 1 9107800 2516100 3106900 3484900 2477 1324 2631 7752;7753;7754 5410;5411;5412 5411 1730;1731;1732 3 SAQGSSSPVPSMVQK VLPSPSGRSAQGSSSP PVPSMVQKSPRITPPA R S A Q K S 1 0 0 0 0 2 0 1 0 0 0 1 1 0 2 5 0 0 0 2 0 0 15 0 1488.7242 P35658;A0A0A0MSW3 P35658 651 665 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.006523 53.946 By MS/MS By matching By matching 1 1 1 6536800 2010900 2566900 1958900 2478 1223 2632 7755;7756;7757 5413 5413 1580 1 SARPPMKVSNK SSSKISVRSARPPMKV PPMKVSNKEHKKTVGH R S A N K E 1 1 1 0 0 0 0 0 0 0 0 2 1 0 2 2 0 0 0 1 0 0 11 2 1213.6601 Q9ULV0 Q9ULV0 616 626 MYO5B Unconventional myosin-Vb yes yes 2 0.017212 51.643 By MS/MS 1 0 0 0 0 2479 1931 2633 7758 5414 5414 2728;2729 1 SASADNLTLPR LRRSARKRSASADNLT ADNLTLPRWSPAIIS_ R S A P R W 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 2 1 0 0 0 0 0 11 0 1143.5884 Q8ND76 Q8ND76 324 334 CCNY Cyclin-Y yes yes 2 5.1101E-05 109.16 By MS/MS By MS/MS By MS/MS 1 1 1 8170000 2872100 2646200 2651700 2480 1652 2634 7759;7760;7761 5415;5416;5417;5418;5419 5416 2263 5 SASASHQADIK RPPKSARRSASASHQA ASHQADIKEARREVEV R S A I K E 3 0 0 1 0 1 0 0 1 1 0 1 0 0 0 3 0 0 0 0 0 0 11 0 1113.5415 C9JXK0;Q14739 C9JXK0 97 107 LBR Lamin-B receptor yes no 2 9.4164E-06 129.17 By MS/MS By MS/MS By MS/MS 1 1 1 30690000 12652000 10966000 7072000 2481 453 2635 7762;7763;7764 5420;5421;5422;5423;5424;5425 5421 596;597 6 SASDSGCDPASKK GKDGRRRKSASDSGCD GCDPASKKLKGDRGEV K S A K K L 2 0 0 2 1 0 0 1 0 0 0 2 0 0 1 4 0 0 0 0 0 0 13 1 1308.5616 Q7LBC6;H0Y9V5 Q7LBC6 289 301 KDM3B Lysine-specific demethylase 3B yes no 2 0.0065519 69.602 By matching By MS/MS By matching 1 1 1 2287700 806840 714660 766170 2482 1574 2636 7765;7766;7767 5426 5426 2143 1 SASITNLSLDR GKSPARNRSASITNLS ITNLSLDRSGSPMVPS R S A D R S 1 1 1 1 0 0 0 0 0 1 2 0 0 0 0 3 1 0 0 0 0 0 11 0 1175.6146 Q9Y2I7;E9PDH4 Q9Y2I7 305 315 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase yes no 2 0.005798 67.879 By MS/MS By matching By matching 1 1 1 4559500 1404400 1520200 1634900 2483 1956 2637 7768;7769;7770 5427 5427 2791 1 SASLSNLHSLDR PKKTPPRKSASLSNLH SNLHSLDRSTREVELG K S A D R S 1 1 1 1 0 0 0 0 1 0 3 0 0 0 0 4 0 0 0 0 0 0 12 0 1298.6579 B0QY53;B0QY54;A0A087WUW0;Q9Y3M2 B0QY53 18 29 CBY1 Protein chibby homolog 1 yes no 2 0.009558 57.434 By MS/MS By MS/MS By MS/MS 1 1 1 7473300 2010900 2897400 2564900 2484 43 2638 7771;7772;7773 5428;5429;5430 5430 55 3 SASPDDDLGSSNWEAADLGNEER SHPHGVKRSASPDDDL ADLGNEERKQKFLRLM R S A E R K 3 1 2 4 0 0 3 2 0 0 2 0 0 0 1 4 0 1 0 0 0 0 23 0 2434.0157 E9PQA1;E9PM92;O00193 E9PQA1 15 37 C11orf58;SMAP Small acidic protein yes no 3 0.0051042 45.395 By MS/MS By matching By MS/MS 1 1 1 97946000 38737000 32397000 26812000 2485 607 2639 7774;7775;7776 5431;5432 5431 813 2 SASPDDDLGSSNWEAADLGNEERK SHPHGVKRSASPDDDL DLGNEERKQKFLRLMG R S A R K Q 3 1 2 4 0 0 3 2 0 0 2 1 0 0 1 4 0 1 0 0 0 0 24 1 2562.1106 E9PQA1;E9PM92;O00193 E9PQA1 15 38 C11orf58;SMAP Small acidic protein yes no 3 0.004189 51.526 By MS/MS By MS/MS 1 1 32742000 22869000 9873500 0 2486 607 2640 7777;7778 5433;5434 5433 813 2 SASQSSLDKLDQELK DTEGSKQRSASQSSLD DKLDQELKEQQKELKN R S A L K E 1 0 0 2 0 2 1 0 0 0 3 2 0 0 0 4 0 0 0 0 0 0 15 1 1647.8315 A0A087X2D8;O60271 A0A087X2D8 719 733 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 2;3 0.0056489 61.444 By MS/MS By matching By matching 3 2 1 12646000 5854600 5136400 1655400 2487 114 2641 7779;7780;7781;7782;7783;7784 5435;5436;5437 5435 148;149;150 3 SASSGAEGDVSSEREP NTPRKEDRSASSGAEG DVSSEREP________ R S A E P - 2 1 0 1 0 0 3 2 0 0 0 0 0 0 1 5 0 0 0 1 0 0 16 1 1563.6649 Q8TEA8 Q8TEA8 194 209 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 2 3.2817E-162 162.76 By MS/MS By MS/MS By MS/MS 2 3 2 29192000 11030000 10279000 7883000 2488 1675 2642 7785;7786;7787;7788;7789;7790;7791 5438;5439;5440;5441;5442 5440 2298;2299;2300;2301 5 SASSGLGEFNAR CERPGRGRSASSGLGE GLGEFNARAREVELEH R S A A R A 2 1 1 0 0 0 1 2 0 0 1 0 0 1 0 3 0 0 0 0 0 0 12 0 1194.5629 Q86YS3 Q86YS3 525 536 RAB11FIP4 Rab11 family-interacting protein 4 yes yes 2 0.0067305 63.966 By MS/MS By matching By matching 1 1 1 1632700 756530 505160 371000 2489 1604 2643 7792;7793;7794 5443 5443 2194 1 SASTDLGTADVVLGR RGKRQALKSASTDLGT TADVVLGRVLEVTDLP K S A G R V 2 1 0 2 0 0 0 2 0 0 2 0 0 0 0 2 2 0 0 2 0 0 15 0 1460.7471 H7C0E9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5 H7C0E9 618 632 R3HDM2 R3H domain-containing protein 2 yes no 2 3.5011E-30 142.95 By MS/MS By MS/MS By MS/MS 1 1 1 8088900 3294400 2222200 2572300 2490 260 2644 7795;7796;7797 5444;5445;5446 5446 342;2955 3 SASTEKLEQGTSALIR ESKTANKRSASTEKLE QGTSALIRQMPLSSAG R S A I R Q 2 1 0 0 0 1 2 1 0 1 2 1 0 0 0 3 2 0 0 0 0 0 16 1 1689.8897 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 183 198 MAP7D3 MAP7 domain-containing protein 3 yes no 2;3 6.8519E-24 135.23 By MS/MS By MS/MS By MS/MS 2 2 2 23515000 9555800 7734500 6224900 2491 139 2645 7798;7799;7800;7801;7802;7803 5447;5448;5449;5450;5451 5447 189;2915 5 SASVSSISLTK HSSPFHSRSASVSSIS VSSISLTKGTDEVPVP R S A T K G 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 5 1 0 0 1 0 0 11 0 1078.587 G5E9C8;Q07889 G5E9C8 1117 1127 SOS1 Son of sevenless homolog 1 yes no 2 0.0010896 96.067 By MS/MS By MS/MS By MS/MS 1 2 2 7017700 1849700 2638300 2529700 2492 736 2646;2647 7804;7805;7806;7807;7808 5452;5453;5454 5452 1001;1002 3 SASWGSADQLK AEKRSHQRSASWGSAD WGSADQLKEQIAKLRQ R S A L K E 2 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 0 1 0 0 0 0 11 0 1148.5462 H7C0Q2;Q86VQ1 H7C0Q2 109 119 GLCCI1 Glucocorticoid-induced transcript 1 protein yes no 2 0.0049587 69.261 By MS/MS By MS/MS By MS/MS 1 1 1 8227800 2799000 3072200 2356600 2493 861 2648 7809;7810;7811 5455;5456;5457 5456 1159 3 SASWGSTDQLK KKKGSHKRSASWGSTD WGSTDQLKEIAKLRQQ R S A L K E 1 0 0 1 0 1 0 1 0 0 1 1 0 0 0 3 1 1 0 0 0 0 11 0 1178.5568 Q6P1L5 Q6P1L5 271 281 FAM117B Protein FAM117B yes yes 2 5.6283E-05 108.98 By MS/MS By MS/MS By MS/MS 1 1 1 11011000 3830900 3817400 3362300 2494 1545 2649 7812;7813;7814 5458;5459;5460 5460 2103 3 SATDGNTSTTPPTSAK AAAAQEVRSATDGNTS TTPPTSAKKRKLNSSS R S A A K K 2 0 1 1 0 0 0 1 0 0 0 1 0 0 2 3 5 0 0 0 0 0 16 0 1534.7111 K4DI93;Q13620 K4DI93 27 42 CUL4B Cullin-4B yes no 2 4.3236E-07 92.247 By MS/MS By MS/MS By MS/MS 2 2 2 11563000 3805400 4062700 3695000 2495 929 2650 7815;7816;7817;7818;7819;7820 5461;5462;5463;5464;5465;5466 5463 3221;3222 6 SATRPSPSPER KDKDKKEKSATRPSPS RPSPSPERSSTGPEPP K S A E R S 1 2 0 0 0 0 1 0 0 0 0 0 0 0 3 3 1 0 0 0 0 0 11 1 1183.5945 Q9UQ35;I3L182;I3L4D8;I3L1I8 Q9UQ35 346 356 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.016384 51.643 By MS/MS By matching By matching 1 1 1 7590800 2219600 3289400 2081900 2496 1945 2651 7821;7822;7823 5467 5467 2765;2766 0 SAVEAQNEVTENPK QVKSTDRKSAVEAQNE NEVTENPKQKIAAESS K S A P K Q 2 0 2 0 0 1 3 0 0 0 0 1 0 0 1 1 1 0 0 2 0 0 14 0 1514.7213 Q32MZ4 Q32MZ4 618 631 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes yes 2 0.017591 41.164 By MS/MS 1 0 0 0 0 2497 1465 2652 7824 5468 5468 1965;3392 1 SAVLHSQSSSSSSR IYYFPRSKSAVLHSQS QSSSSSSRQLVP____ K S A S R Q 1 1 0 0 0 1 0 0 1 0 1 0 0 0 0 8 0 0 0 1 0 0 14 0 1418.675 A0A0A0MRH8;A0A0A0MSH9 A0A0A0MRH8 599 612 CHD1L yes no 2 0.011304 50.659 By MS/MS By matching 1 1 616340 340350 275990 0 2498 133 2653 7825;7826 5469 5469 178 1 SAVRPASLNLNR VHYATMARSAVRPASL PASLNLNRSRSLSNSN R S A N R S 2 2 2 0 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 1 0 0 12 1 1296.7262 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 882 893 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 0.015723 50.354 By MS/MS By matching 1 1 1557700 0 754370 803300 2499 1750 2654 7827;7828 5470 5470 2416 1 SCAVAEYGVYVK TGILSFDKSCAVAEYG AEYGVYVKVTSIQDWV K S C V K V 2 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 2 3 0 0 12 0 1344.6384 A0A087WU08;A0A0C4DGL8;J3QLC9;J3QR68;H0Y300;P00738;A0A0A0MRD9;P00739 A0A087WU08 255 266 HP;HPR Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain;Haptoglobin-related protein yes no 2 0.0028842 79.986 By matching By MS/MS 1 1 633210 0 296310 336900 2500 32 2655 7829;7830 5471 5471 1 SCFESSPDPELK QSVTPQRRSCFESSPD SSPDPELKSRTPSRHS R S C L K S 0 0 0 1 1 0 2 0 0 0 1 1 0 1 2 3 0 0 0 0 0 0 12 0 1394.6024 Q9UQ35;I3L182;I3L4D8 Q9UQ35 871 882 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 2.6403E-08 124.38 By MS/MS By MS/MS By MS/MS 1 1 1 51110000 17953000 19237000 13921000 2501 1945 2656 7831;7832;7833 5472;5473;5474 5472 2767;2768 3 SCNCLLLK IAKAVNEKSCNCLLLK SCNCLLLKVNQIGSVT K S C L K V 0 0 1 0 2 0 0 0 0 0 3 1 0 0 0 1 0 0 0 0 0 0 8 0 1006.494 P06733 P06733 336 343 ENO1 Alpha-enolase yes yes 2 0.018468 96.19 By MS/MS 1 981900 0 981900 0 2502 1113 2657 7834 5475 5475 1 SDAGLESDTAMK ________________ LESDTAMKKGETLRKQ R S D M K K 2 0 0 2 0 0 1 1 0 0 1 1 1 0 0 2 1 0 0 0 0 0 12 0 1223.534 Q9NR30 Q9NR30 7 18 DDX21 Nucleolar RNA helicase 2 yes yes 2 2.0538E-05 107.53 By matching By MS/MS By MS/MS 1 1 1 1850800 499030 864010 487770 2503 1850 2658 7835;7836;7837 5476;5477 5477 2604;3511 2 SDGSLEDGDDVHR LIEDGGARSDGSLEDG EDGDDVHRAVDNERDG R S D H R A 0 1 0 4 0 0 1 2 1 0 1 0 0 0 0 2 0 0 0 1 0 0 13 0 1400.5804 Q9NRX5 Q9NRX5 361 373 SERINC1 Serine incorporator 1 yes yes 2 0.002293 73.877 By MS/MS By matching By matching 2 2 1 4036600 1869900 1469800 696880 2504 1853 2659 7838;7839;7840;7841;7842 5478;5479 5479 2607;2608 2 SDGSTHHVSDQSKRMQEEK S D E K 0 1 0 2 0 2 2 1 2 0 0 2 1 0 0 4 1 0 0 1 0 0 19 2 2184.9818 REV__O75563 yes yes 3 0.0080796 46.892 By matching By matching By MS/MS 1 1 2 7939500 1683400 2451900 3804200 + 2505 2001 2660 7843;7844;7845;7846 5480;5481 5480 2855 1 SDKSPDLAPTPAPQSTPR KAAKQEARSDKSPDLA PAPQSTPRNTVSQSIS R S D P R N 2 1 0 2 0 1 0 0 0 0 1 1 0 0 5 3 2 0 0 0 0 0 18 1 1863.9327 F8WAE5;Q9BY44 F8WAE5 498 515 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 2;3 0.003499 63.894 By MS/MS By MS/MS By MS/MS 2 2 2 80059000 31047000 26533000 22478000 2506 693 2661 7847;7848;7849;7850;7851;7852 5482;5483;5484;5485 5482 925;926 4 SDLLLEGFNNYR SGAGEHLKSDLLLEGF LEGFNNYRFLSNGYIP K S D Y R F 0 1 2 1 0 0 1 1 0 0 3 0 0 1 0 1 0 0 1 0 0 0 12 0 1439.7045 P35580 P35580 297 308 MYH10 Myosin-10 yes yes 2 0.016994 53.751 By MS/MS 1 210780 210780 0 0 2507 1222 2662 7853 5486 5486 0 SDLNGLPSPVEER PYATIIPRSDLNGLPS LPSPVEERCGDSPNSE R S D E R C 0 1 1 1 0 0 2 1 0 0 2 0 0 0 2 2 0 0 0 1 0 0 13 0 1411.6943 C9JLA7;E7EWN3;Q9C0A6 C9JLA7 65 77 SETD5 SET domain-containing protein 5 yes no 2 0.014369 50.562 By matching By MS/MS 1 2 1335200 594370 740860 0 2508 440 2663 7854;7855;7856 5487;5488 5488 580 2 SDPTSYAGYIEDLK ALEYTFSRSDPTSYAG AGYIEDLKKFLKPYTL R S D L K K 1 0 0 2 0 0 1 1 0 1 1 1 0 0 1 2 1 0 2 0 0 0 14 0 1557.7199 C9JXZ1;C9JA36;P54709 C9JXZ1 84 97 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes no 3 0.0069545 31.881 By MS/MS 1 14326000 0 14326000 0 2509 424 2664 7857 5489 5489 1 SDSGGSSSEPFDR SGLVPRERSDSGGSSS SSSEPFDRHAPAMLRE R S D D R H 0 1 0 2 0 0 1 2 0 0 0 0 0 1 1 5 0 0 0 0 0 0 13 0 1326.5324 P48634 P48634 759 771 PRRC2A Protein PRRC2A yes yes 2 0.0017723 77.204 By MS/MS By MS/MS By MS/MS 1 1 1 4650200 1520400 1673700 1456200 2510 1251 2665 7858;7859;7860 5490;5491;5492;5493 5490 1638;1639 4 SDSLQKQISQKEK YLQECLSKSDSLQKQI KQISQKEKQLVQLETD K S D E K Q 0 0 0 1 0 3 1 0 0 1 1 3 0 0 0 3 0 0 0 0 0 0 13 2 1517.8049 X6R3F0;H0YD93;Q8WXA3 X6R3F0 18 30 RUFY2 RUN and FYVE domain-containing protein 2 yes no 3 0.017925 43.305 By MS/MS 1 0 0 0 0 2511 786 2666 7861 5494 5494 1071 1 SDSQASLTVPLSPQVVR KSTSVLSKSDSQASLT PLSPQVVRSKAVSHRT K S D V R S 1 1 0 1 0 2 0 0 0 0 2 0 0 0 2 4 1 0 0 3 0 0 17 0 1782.9476 Q8TEV9 Q8TEV9 487 503 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein yes yes 2 0.0074513 50.145 By MS/MS By matching 1 1 683910 425710 258210 0 2512 1679 2667 7862;7863 5495 5495 2305 1 SDSSQPMLLR SPSTSLQRSDSSQPML SSQPMLLRVVGSQTSD R S D L R V 0 1 0 1 0 1 0 0 0 0 2 0 1 0 1 3 0 0 0 0 0 0 10 0 1132.5547 E9PDN5;A0A075B6G3;P11532;E7EQR9;F5GZY3;E7EQS5;F8VX32;E7ESB2;H0Y304;A0A087WV90;A0A087WTU7 E9PDN5 3617 3626 DMD Dystrophin yes no 2 0.0024253 80.834 By MS/MS By matching By MS/MS 1 1 1 2023700 551040 810340 662320 2513 6 2668 7864;7865;7866 5496;5497 5496 4 2 SDSYISRMTTLGLVPR S D P R 0 2 0 1 0 0 0 1 0 1 2 0 1 0 1 3 2 0 1 1 0 0 16 1 1794.9298 REV__Q5VSF9 yes no 2 0.018849 44.188 By MS/MS 1 0 0 0 0 + 2514 2005 2669 7867 5498 5498 1 SDVLELTDDNFESR ________________ TDDNFESRISDTGSAG - S D S R I 0 1 1 3 0 0 2 0 0 0 2 0 0 1 0 2 1 0 0 1 0 0 14 0 1638.7373 H7BZJ3 H7BZJ3 1 14 PDIA3 yes yes 2 5.6379E-05 93.442 By MS/MS By matching By MS/MS 1 1 1 4308400 1573300 1660900 1074200 2515 859 2670 7868;7869;7870 5499;5500 5500 2 SDVLNEDHHWSVAK S D A K 1 0 1 2 0 0 1 0 2 0 1 1 0 0 0 2 0 1 0 2 0 0 14 0 1635.7641 REV__A0A1B0GTI3 yes no 2 0.0083151 54.199 By MS/MS By matching 2 1 1156300 0 880630 275680 + 2516 1984 2671 7871;7872;7873 5501 5501 2836 1 SEACPCQPDSGSPLPAEEEKR KRSIEGRRSEACPCQP LPAEEEKRLSAESGLS R S E K R L 2 1 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 0 21 1 2343.0107 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160 A0A0G2JMS7 412 432 SCRIB Protein scribble homolog yes no 3 0.0089881 49.768 By matching By MS/MS By matching 1 1 1 2860800 1154100 1039600 667040 2517 226 2672 7874;7875;7876 5502 5502 309;310 1 SEAPAEVTHFSPK KVAQRIKKSEAPAEVT EVTHFSPKSIPDYDFE K S E P K S 2 0 0 0 0 0 2 0 1 0 0 1 0 1 2 2 1 0 0 1 0 0 13 0 1398.6779 Q6PID6 Q6PID6 187 199 TTC33 Tetratricopeptide repeat protein 33 yes yes 2;3 0.00035479 73.499 By MS/MS By MS/MS By MS/MS 2 2 1 7769100 3287200 2691900 1789900 2518 1554 2673 7877;7878;7879;7880;7881 5503;5504;5505;5506 5506 2112 2 SEDESETEDEEEKSQEDQEQKR KEKKRKKRSEDESETE QEDQEQKRKRRKTRQP R S E K R K 0 1 0 3 0 3 9 0 0 0 0 2 0 0 0 3 1 0 0 0 0 0 22 2 2683.0853 Q7Z6P5;J3KQ69;P25205 Q7Z6P5 163 184 MCM3 DNA replication licensing factor MCM3 yes no 3;4 1.2193E-23 97.776 By MS/MS By MS/MS By MS/MS 2 2 2 133710000 46155000 41692000 45863000 2519 909 2674 7882;7883;7884;7885;7886;7887 5507;5508;5509;5510;5511 5507 1221;3214 5 SEDMPFSPK EQNPPPARSEDMPFSP EDMPFSPKASVAAMEA R S E P K A 0 0 0 1 0 0 1 0 0 0 0 1 1 1 2 2 0 0 0 0 0 0 9 0 1036.4535 Q12888;A6NNK5;C9JXV0 Q12888 259 267 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0022077 123.67 By MS/MS By MS/MS By MS/MS 1 1 1 4449700 1322800 1664700 1462200 2520 1367 2675 7888;7889;7890 5512;5513;5514;5515;5516;5517 5513 1805 6 SEESPVYSNSSVR PSDWWVVKSEESPVYS VYSNSSVRNELPMHHN K S E V R N 0 1 1 0 0 0 2 0 0 0 0 0 0 0 1 5 0 0 1 2 0 0 13 0 1439.6529 H0Y8J2;Q03188 H0Y8J2 442 454 CENPC Centromere protein C yes no 2 0.0060294 63.662 By MS/MS By MS/MS By MS/MS 1 1 1 2943000 1037800 964000 941240 2521 771 2676 7891;7892;7893 5518;5519;5520;5521 5518 1053 4 SEIYGLVQR KSSSEESRSEIYGLVQ EIYGLVQRCVIIQKDD R S E Q R C 0 1 0 0 0 1 1 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 9 0 1063.5662 Q9NZN5 Q9NZN5 63 71 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes yes 2 0.0084144 75.213 By MS/MS By MS/MS By MS/MS 1 1 1 1107300 369300 437750 300270 2522 1885 2677 7894;7895;7896 5522;5523;5524 5523 3924 3 SEPHSPGIPEIFR SSSSKGIKSEPHSPGI PGIPEIFRTASQRCRD K S E F R T 0 1 0 0 0 0 2 1 1 2 0 0 0 1 3 2 0 0 0 0 0 0 13 0 1464.7361 Q8ND82;Q9UJJ2 Q8ND82 76 88 ZNF280C Zinc finger protein 280C yes no 3 2.3752E-05 99.927 By MS/MS By MS/MS 1 1 2081900 1037200 0 1044700 2523 1653 2678 7897;7898 5525;5526 5525 2264 2 SEPMQQLLDPNTLQQSVESR PASLDSSRSEPMQQLL LQQSVESRYRPNIILY R S E S R Y 0 1 1 1 0 4 2 0 0 0 3 0 1 0 2 3 1 0 0 1 0 0 20 0 2299.1114 Q9H7V2 Q9H7V2 67 86 SYNDIG1 Synapse differentiation-inducing gene protein 1 yes yes 3 0.0085774 52.52 By MS/MS 1 0 0 0 0 2524 1833 2679 7899 5527 5527 2574;2575 1 SEPSLEPESFRSPTFGK SSRHPSYRSEPSLEPE FRSPTFGKSFHFDPLS R S E G K S 0 1 0 0 0 0 3 1 0 0 1 1 0 2 3 4 1 0 0 0 0 0 17 1 1893.9109 Q9C0B5;H0YEF4 Q9C0B5 398 414 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase yes no 3 0.0037709 54.501 By MS/MS 1 461810 461810 0 0 2525 1803 2680 7900 5528 5528 2508 1 SESLIDASEDSQLEAAIR SPPKKCARSESLIDAS SQLEAAIRASLQETHF R S E I R A 3 1 0 2 0 1 3 0 0 2 2 0 0 0 0 4 0 0 0 0 0 0 18 0 1932.9276 C9JAT7;O94888 C9JAT7 116 133 UBXN7 UBX domain-containing protein 7 yes no 2 0.0083218 50.079 By matching By MS/MS By matching 1 1 1 2377300 1035000 609590 732660 2526 426 2681 7901;7902;7903 5529 5529 566 1 SESLSNCSIGK EDATMGSRSESLSNCS LSNCSIGKKRLEKSPS R S E G K K 0 0 1 0 1 0 1 1 0 1 1 1 0 0 0 4 0 0 0 0 0 0 11 0 1180.5394 Q92625 Q92625 645 655 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2 0.012196 55.776 By MS/MS By matching 1 1 817010 0 416990 400020 2527 1702 2682 7904;7905 5530 5530 2333 1 SESMPVQLNK QQQQRLMKSESMPVQL SMPVQLNKGDVVTGSD K S E N K G 0 0 1 0 0 1 1 0 0 0 1 1 1 0 1 2 0 0 0 1 0 0 10 0 1131.5594 C9J3F6;Q92609 C9J3F6 472 481 TBC1D5 TBC1 domain family member 5 yes no 2 0.004596 70.399 By matching By MS/MS By MS/MS 1 1 1 2879800 854490 1130100 895240 2528 409 2683 7906;7907;7908 5531;5532 5531 546 2 SESPKEPEQLR ________________ PKEPEQLRKLFIGGLS K S E L R K 0 1 0 0 0 1 3 0 0 0 1 1 0 0 2 2 0 0 0 0 0 0 11 1 1298.6466 F8W6I7;P09651;F8VTQ5;F8W646 F8W6I7 4 14 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 2;3 2.0066E-15 143.56 By MS/MS By MS/MS By MS/MS 2 2 2 260820000 90241000 99930000 70645000 2529 686 2684 7909;7910;7911;7912;7913;7914 5533;5534;5535;5536;5537 5535 917 5 SESPKEPEQLRK ________________ KEPEQLRKLFIGGLSF K S E R K L 0 1 0 0 0 1 3 0 0 0 1 2 0 0 2 2 0 0 0 0 0 0 12 2 1426.7416 F8W6I7;P09651;F8VTQ5;F8W646 F8W6I7 4 15 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 3 0.0010589 93.839 By MS/MS By MS/MS 1 1 46100000 29905000 0 16196000 2530 686 2685 7915;7916 5538;5539 5539 917 2 SESPPAELPSLR LRKSTKKRSESPPAEL PAELPSLRRSTRQKTT R S E L R R 1 1 0 0 0 0 2 0 0 0 2 0 0 0 3 3 0 0 0 0 0 0 12 0 1281.6565 G5E9G6;Q14669;H7C1L9 G5E9G6 352 363 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.0018768 77.894 By MS/MS By MS/MS By MS/MS 1 1 1 7860700 2436800 2558300 2865600 2531 737 2686 7917;7918;7919 5540;5541;5542 5541 1004 3 SESPPPLSDPK TSAITASRSESPPPLS PPPLSDPKQAKVVARR R S E P K Q 0 0 0 1 0 0 1 0 0 0 1 1 0 0 4 3 0 0 0 0 0 0 11 0 1152.5663 Q15059 Q15059 261 271 BRD3 Bromodomain-containing protein 3 yes yes 2 9.7516E-06 115.92 By MS/MS By MS/MS By MS/MS 2 3 1 90379000 32694000 52916000 4768400 2532 1432 2687 7920;7921;7922;7923;7924;7925 5543;5544;5545;5546;5547;5548 5545 1920;1921 6 SESSGILPNTTDMR QTHPPCRRSESSGILP LPNTTDMRLRPGTRRD R S E M R L 0 1 1 1 0 0 1 1 0 1 1 0 1 0 1 3 2 0 0 0 0 0 14 0 1506.6984 Q92667;I3L2A2;I3L2N7;I3L0K6 Q92667 105 118 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.013841 49.298 By matching By matching By MS/MS 1 1 1 2154500 612600 707350 834560 2533 1704 2688 7926;7927;7928 5549 5549 2336;2337;2338 1 SESSTSAFSTPTR RILKPQLKSESSTSAF SAFSTPTRSIPPRHNA K S E T R S 1 1 0 0 0 0 1 0 0 0 0 0 0 1 1 5 3 0 0 0 0 0 13 0 1356.6157 Q8WWQ0 Q8WWQ0 1471 1483 PHIP PH-interacting protein yes yes 2 0.014216 60.196 By MS/MS 1 549630 0 0 549630 2534 1685 2689 7929 5550 5550 3470 0 SESVEGFLSPSR HSGKRTPRSESVEGFL EGFLSPSRCGSRNGEK R S E S R C 0 1 0 0 0 0 2 1 0 0 1 0 0 1 1 4 0 0 0 1 0 0 12 0 1293.6201 Q08AD1 Q08AD1 1311 1322 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2 1.6908E-50 161.21 By MS/MS By MS/MS By MS/MS 2 2 2 2970800 1075700 905570 989520 2535 1357 2690 7930;7931;7932;7933;7934;7935 5551;5552;5553;5554 5553 1779;1780 4 SESVVSGLDSPAK KALGILGRSESVVSGL SGLDSPAKTSSMEKKL R S E A K T 1 0 0 1 0 0 1 1 0 0 1 1 0 0 1 4 0 0 0 2 0 0 13 0 1274.6354 H7BYJ3;O14578 H7BYJ3 59 71 CIT Citron Rho-interacting kinase yes no 2 0.00012032 94.551 By MS/MS By MS/MS 1 1 2702700 1387000 0 1315700 2536 855 2691 7936;7937 5555;5556 5555 1154 2 SESVVYADIR HHSDKINKSESVVYAD SVVYADIRKN______ K S E I R K 1 1 0 1 0 0 1 0 0 1 0 0 0 0 0 2 0 0 1 2 0 0 10 0 1137.5666 O95297 O95297 258 267 MPZL1 Myelin protein zero-like protein 1 yes yes 2 0.0012088 99.815 By MS/MS By MS/MS By MS/MS 1 1 1 22284000 7204000 8498600 6581200 2537 1066 2692 7938;7939;7940 5557;5558;5559 5557 3758 3 SETAPAAPAAPAPAEKTPVK ________________ PAEKTPVKKKARKSAG M S E V K K 7 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 2 0 0 1 0 0 20 1 1903.0051 P10412 P10412 2 21 HIST1H1E Histone H1.4 yes yes 3 0.0094146 60.735 By matching By matching By MS/MS 1 1 1 9663200 3608600 3602700 2451900 2538 1137 2693 7941;7942;7943 5560 5560 3283 1 SETAPAAPAAPAPAEKTPVKK ________________ AEKTPVKKKARKSAGA M S E K K K 7 0 0 0 0 0 2 0 0 0 0 3 0 0 5 1 2 0 0 1 0 0 21 2 2031.1001 P10412 P10412 2 22 HIST1H1E Histone H1.4 yes yes 3 0.00012523 77.543 By MS/MS By matching By matching 1 1 1 4943400 2182200 1588300 1172900 2539 1137 2694 7944;7945;7946 5561 5561 3283 1 SEVAAGGGSWDDR LRRKLAERSEVAAGGG GGGSWDDRLRRLISPN R S E D R L 2 1 0 2 0 0 1 3 0 0 0 0 0 0 0 2 0 1 0 1 0 0 13 0 1305.5586 Q66K74 Q66K74 313 325 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 2 0.013625 51.009 By matching By MS/MS By matching 1 1 1 966110 307090 359690 299330 2540 1528 2695 7947;7948;7949 5562 5562 2080 1 SEVQQPVHPKPLSPDSR DSRDSQVKSEVQQPVH KPLSPDSRASSLSESS K S E S R A 0 1 0 1 0 2 1 0 1 0 1 1 0 0 4 3 0 0 0 2 0 0 17 1 1899.9803 F8VS07;F8VQE1;Q9UHB6;F8VRN8 F8VS07 48 64 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0035644 54.953 By MS/MS By MS/MS By MS/MS 1 1 1 18482000 8863200 4928400 4690000 2541 666 2696 7950;7951;7952 5563;5564;5565;5566 5565 893 3 SFCLDDQSPDLIETVNEVSK PGQSQKSKSFCLDDQS ETVNEVSKLSISHEIV K S F S K L 0 0 1 3 1 1 2 0 0 1 2 1 0 1 1 3 1 0 0 2 0 0 20 0 2295.0577 F2Z2N1;B4DZS4 F2Z2N1 34 53 TCP11X2;TCP11X1 T-complex protein 11 X-linked protein 1 yes no 3 0.015883 44.304 By MS/MS 1 0 0 0 0 2542 355 2697 7953 5567 5567 486;487;2998 1 SFDEVEGVFGR GECGFYQRSFDEVEGV EVEGVFGRGGGREMHR R S F G R G 0 1 0 1 0 0 2 2 0 0 0 0 0 2 0 1 0 0 0 2 0 0 11 0 1240.5724 I1E4Y6;Q6Y7W6;E7ESB6;C9JW88 I1E4Y6 139 149 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2 0.01103 56.551 By MS/MS By matching By matching 1 1 1 1332600 508130 420010 404450 2543 881 2698 7954;7955;7956 5568 5568 1185 1 SFDHLISDTK KKLLGTRKSFDHLISD DHLISDTKAPKRQEME K S F T K A 0 0 0 2 0 0 0 0 1 1 1 1 0 1 0 2 1 0 0 0 0 0 10 0 1161.5666 J3QSG6;H0Y465;P21359 J3QSG6 338 347 NF1 Neurofibromin;Neurofibromin truncated yes no 2 3.0392E-05 131.42 By MS/MS By MS/MS By MS/MS 1 1 1 12947000 4672700 4653200 3621400 2544 751 2699 7957;7958;7959 5569;5570;5571 5570 1026 3 SFDLQKSEDMLRK LLRWLQARSFDLQKSE KSEDMLRKHMEFRKQQ R S F R K H 0 1 0 2 0 1 1 0 0 0 2 2 1 1 0 2 0 0 0 0 0 0 13 2 1595.7977 B5MCN3 B5MCN3 46 58 SEC14L6 Putative SEC14-like protein 6 yes yes 2 0.007786 45.997 By MS/MS By matching 1 1 392390 266000 0 126390 2545 363 2700 7960;7961 5572 5572 30 1 SFEEEGEHLGSR RLEAVTARSFEEEGEH EGEHLGSRKHRMSEEK R S F S R K 0 1 0 0 0 0 4 2 1 0 1 0 0 1 0 2 0 0 0 0 0 0 12 0 1375.6004 Q9BXW6 Q9BXW6 499 510 OSBPL1A Oxysterol-binding protein-related protein 1 yes yes 2 7.6271E-10 132.14 By MS/MS By MS/MS By MS/MS 1 1 1 12168000 3674400 4988600 3504800 2546 1796 2701 7962;7963;7964 5573;5574;5575 5573 2496 3 SFESTVGQGSDTYIYIFR RLKPLFNKSFESTVGQ DTYIYIFRVCREAGNH K S F F R V 0 1 0 1 0 1 1 2 0 2 0 0 0 2 0 3 2 0 2 1 0 0 18 0 2068.9742 F5GXE0;H0YGE9;F5GXU0;F5H883;F5GX30;P20645 F5GXE0 59 76 M6PR Cation-dependent mannose-6-phosphate receptor yes no 2 0.0027416 89.959 By MS/MS By matching By matching 1 1 1 6808800 2696900 1661800 2450200 2547 637 2702 7965;7966;7967 5576 5576 1 SFEVEEVETPNSTPPR RPFTALKRSFEVEEVE TPNSTPPRRVQTPLLR R S F P R R 0 1 1 0 0 0 4 0 0 0 0 0 0 1 3 2 2 0 0 2 0 0 16 0 1816.8479 K7EJV0;K7EPY1;K7ENL0;Q9UHD8 K7EJV0 15 30 SEPT9 Septin-9 yes no 2 2.4304E-06 88.561 By MS/MS By MS/MS By MS/MS 1 1 1 6189100 2129500 2307500 1752000 2548 936 2703 7968;7969;7970 5577;5578;5579;5580 5580 1247 4 SFLSEPSSPGR ________________ SEPSSPGRTKTTKGFK R S F G R T 0 1 0 0 0 0 1 1 0 0 1 0 0 1 2 4 0 0 0 0 0 0 11 0 1162.5619 H0YC41;Q69YN4 H0YC41 5 15 KIAA1429 Protein virilizer homolog yes no 2 2.966E-23 152.38 By MS/MS By MS/MS By MS/MS 1 1 1 17293000 6046500 6059200 5187400 2549 781 2704 7971;7972;7973 5581;5582;5583 5583 1066;1067 3 SFNGSLKNVAVDELSR VYAHQEPKSFNGSLKN VAVDELSRQGCTVTVS K S F S R Q 1 1 2 1 0 0 1 1 0 0 2 1 0 1 0 3 0 0 0 2 0 0 16 1 1734.8901 A2A2U4;Q5TD05;Q5TD07;P16083 A2A2U4 17 32 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes no 3 0.013676 40.237 By matching By MS/MS By matching 1 1 1 1683300 869920 417070 396320 2550 295 2705 7974;7975;7976 5584 5584 390 0 SFNYSPNSSTSEVSSTSASK SAQPFIPKSFNYSPNS VSSTSASKASIGQSPG K S F S K A 1 0 2 0 0 0 1 0 0 0 0 1 0 1 1 9 2 0 1 1 0 0 20 0 2065.9076 Q5VT52 Q5VT52 589 608 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes yes 2 0.0016242 70.114 By matching By MS/MS By MS/MS 1 1 1 12551000 3684100 5064500 3802300 2551 1518 2706 7977;7978;7979 5585;5586 5585 2057 2 SFPNLAFIR TIPNGYFKSFPNLAFI FPNLAFIRLNYNKLTD K S F I R L 1 1 1 0 0 0 0 0 0 1 1 0 0 2 1 1 0 0 0 0 0 0 9 0 1063.5815 P51888 P51888 264 272 PRELP Prolargin yes yes 2 0.012607 79.116 By MS/MS By matching 1 1 707300 633890 0 73414 2552 1281 2707 7980;7981 5587 5587 1 SFSADNFIGIQR LCRAAMRRSFSADNFI DNFIGIQRSKAILS__ R S F Q R S 1 1 1 1 0 1 0 1 0 2 0 0 0 2 0 2 0 0 0 0 0 0 12 0 1353.6677 Q8N7R7 Q8N7R7 342 353 CCNYL1 Cyclin-Y-like protein 1 yes yes 2 0.00078029 86.288 By MS/MS By MS/MS By matching 1 1 1 8819000 2999400 2620000 3199700 2553 1639 2708 7982;7983;7984 5588;5589 5588 2245 2 SFSAHCTQVVNAK KVKRRSPKSFSAHCTQ CTQVVNAKKNAIPVSK K S F A K K 2 0 1 0 1 1 0 0 1 0 0 1 0 1 0 2 1 0 0 2 0 0 13 0 1447.6878 B4DUJ5;Q8IWP9 B4DUJ5 13 25 CCDC28A Coiled-coil domain-containing protein 28A yes no 2 0.0076607 59.227 By MS/MS By matching 1 1 1301200 671490 629730 0 2554 349 2709 7985;7986 5590 5590 481 1 SFSKEELMSSDLEETAGSTSIPK FSKPKKKKSFSKEELM AGSTSIPKRKKSTPKE K S F P K R 1 0 0 1 0 0 4 1 0 1 2 2 1 1 1 6 2 0 0 0 0 0 23 1 2472.1578 O00567 O00567 511 533 NOP56 Nucleolar protein 56 yes yes 3 0.00014718 76.186 By MS/MS By matching By MS/MS 2 2 2 29386000 15200000 5387700 8798400 2555 978 2710;2711 7987;7988;7989;7990;7991;7992 5591;5592;5593 5591 71 1293;1294;1297 3 SFSKEVEER ARTPATKRSFSKEVEE FSKEVEERSRERPSQP R S F E R S 0 1 0 0 0 0 3 0 0 0 0 1 0 1 0 2 0 0 0 1 0 0 9 1 1109.5353 E7EX73;E9PGM1;E7EUU4;Q04637 E7EX73 1022 1030 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 2;3 0.0058505 88.177 By MS/MS By matching By MS/MS 3 3 3 392250000 147070000 137920000 107260000 2556 550 2712 7993;7994;7995;7996;7997;7998;7999;8000;8001 5594;5595;5596;5597;5598 5595 724;725 5 SFSLASSSNSPISQR NNPPLKSRSFSLASSS SNSPISQRRPSQNAIS R S F Q R R 1 1 1 0 0 1 0 0 0 1 1 0 0 1 1 7 0 0 0 0 0 0 15 0 1566.7638 Q9BXB4 Q9BXB4 172 186 OSBPL11 Oxysterol-binding protein-related protein 11 yes yes 2 1.6683E-18 122.33 By MS/MS By MS/MS By MS/MS 3 3 2 20317000 7686300 6964800 5665900 2557 1793 2713 8002;8003;8004;8005;8006;8007;8008;8009 5599;5600;5601;5602;5603;5604 5599 2488;2489;2490;2491 6 SFSMQDLR GALAGRLRSFSMQDLR SFSMQDLRSISDAPAP R S F L R S 0 1 0 1 0 1 0 0 0 0 1 0 1 1 0 2 0 0 0 0 0 0 8 0 982.45422 E5RGS2;Q9H6H4 E5RGS2 150 157 REEP4 Receptor expression-enhancing protein;Receptor expression-enhancing protein 4 yes no 2 0.0076492 110.31 By MS/MS By MS/MS By MS/MS 1 1 1 13134000 4305200 4502600 4325900 2558 504 2714 8010;8011;8012 5605;5606;5607 5607 647;648 3 SFSSPENFQR SSAQIIQRSFSSPENF SSPENFQRQAVMNSAL R S F Q R Q 0 1 1 0 0 1 1 0 0 0 0 0 0 2 1 3 0 0 0 0 0 0 10 0 1197.5415 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 14 23 RBM7 RNA-binding protein 7 yes no 2 0.0013519 103.08 By MS/MS By MS/MS By MS/MS 2 2 2 28097000 9398500 10914000 7783900 2559 711 2715 8013;8014;8015;8016;8017;8018 5608;5609;5610;5611 5610 959;960 4 SFSSQRPVDR PKREIAKRSFSSQRPV SSQRPVDRQNRRGNNG R S F D R Q 0 2 0 1 0 1 0 0 0 0 0 0 0 1 1 3 0 0 0 1 0 0 10 1 1177.584 E7EPN9;Q9Y520;H7C5N8 E7EPN9 1544 1553 PRRC2C Protein PRRC2C yes no 2 0.0075356 72.289 By MS/MS By matching By matching 1 1 1 46444000 16881000 16529000 13034000 2560 526 2716 8019;8020;8021 5612 5612 675 1 SFSSSAEEHS LRNHIRSRSFSSSAEE SSSAEEHS________ R S F H S - 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 5 0 0 0 0 0 0 10 0 1066.4203 Q96EQ0 Q96EQ0 295 304 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 2 9.1387E-05 120.45 By MS/MS By MS/MS By MS/MS 1 1 1 8599000 3447400 2705400 2446200 2561 1732 2717 8022;8023;8024 5613;5614;5615;5616;5617 5615 2380 5 SFTLDDESLK RSSSSRSRSFTLDDES TLDDESLKYLTHEEKD R S F L K Y 0 0 0 2 0 0 1 0 0 0 2 1 0 1 0 2 1 0 0 0 0 0 10 0 1153.5503 X6RHS9;Q86WR7 X6RHS9 43 52 PROSER2 Proline and serine-rich protein 2 yes no 2 0.013288 58.63 By MS/MS By matching By matching 1 1 1 1691000 647140 538080 505750 2562 1599 2718 8025;8026;8027 5618 5618 2185 1 SFVPEEEKHEER TRTRGRKRSFVPEEEK EEEKHEERVPRERRQR R S F E R V 0 1 0 0 0 0 5 0 1 0 0 1 0 1 1 1 0 0 0 1 0 0 12 1 1514.7001 A0A0U1RRH6;O94880 A0A0U1RRH6 835 846 PHF14 PHD finger protein 14 yes no 3 0.00017757 103.97 By MS/MS By MS/MS By MS/MS 1 1 1 5861000 2327900 1853700 1679400 2563 261 2719 8028;8029;8030 5619;5620;5621 5621 343 3 SFVPEEEKHEERVPR TRTRGRKRSFVPEEEK KHEERVPRERRQRQSV R S F P R E 0 2 0 0 0 0 5 0 1 0 0 1 0 1 2 1 0 0 0 2 0 0 15 2 1866.9224 A0A0U1RRH6;O94880 A0A0U1RRH6 835 849 PHF14 PHD finger protein 14 yes no 4 0.017191 43.042 By MS/MS By matching 1 1 1515800 810770 0 705010 2564 261 2720 8031;8032 5622 5622 343 1 SGAHSSASPPR FDWGYEERSGAHSSAS HSSASPPRSRSRDRSH R S G P R S 2 1 0 0 0 0 0 1 1 0 0 0 0 0 2 4 0 0 0 0 0 0 11 0 1052.4999 P18615;A0A0A0MT02;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 174 184 NELFE Negative elongation factor E yes no 2;3 0.0023969 82.774 By MS/MS By matching By matching 2 2 2 19864000 6884200 7410700 5568700 2565 1171 2721 8033;8034;8035;8036;8037;8038 5623;5624 5623 1519 2 SGASEANLIVAK QMICSKRRSGASEANL EANLIVAKSWADVVKL R S G A K S 3 0 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 0 12 0 1158.6245 P46013 P46013 648 659 MKI67 Antigen KI-67 yes yes 2 0.0025181 74.46 By matching By MS/MS By matching 1 1 1 1813700 712990 601690 499020 2566 1241 2722 8039;8040;8041 5625 5625 1610 1 SGDEEFKGEDELCDSGR DDAAGDFRSGDEEFKG DELCDSGRQRGPATYP R S G G R Q 0 1 0 3 1 0 4 3 0 0 1 1 0 1 0 2 0 0 0 0 0 0 17 1 1928.7694 M0QYL4;O43823 M0QYL4 153 169 AKAP8 A-kinase anchor protein 8 yes no 3 0.01848 42.618 By matching By MS/MS 1 1 752060 261730 0 490330 2567 961 2723 8042;8043 5626 5626 1263 1 SGDETPGSEVPGDK EEDEPEERSGDETPGS GSEVPGDKAAEEQGDD R S G D K A 0 0 0 2 0 0 2 3 0 0 0 1 0 0 2 2 1 0 0 1 0 0 14 0 1373.5947 H3BQZ7;Q1KMD3 H3BQZ7 161 174 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 2 2.3857E-05 88.282 By matching By MS/MS By MS/MS 1 1 1 2225500 879950 835130 510380 2568 837 2724 8044;8045;8046 5627;5628;5629 5628 1126 3 SGEGEVSGLMR VSGVKRSRSGEGEVSG GEVSGLMRKVPRVSLE R S G M R K 0 1 0 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 0 1 0 0 11 0 1120.5183 M0R0K9;Q13263 M0R0K9 98 108 TRIM28 Transcription intermediary factor 1-beta yes no 2 0.0024839 75.788 By MS/MS By MS/MS By matching 2 2 2 24945000 8422300 8947200 7575700 2569 965 2725;2726 8047;8048;8049;8050;8051;8052 5630;5631;5632 5631 69 1270 3 SGEVAEGEARSPSHK GMQAVKIKSGEVAEGE EARSPSHKKRAADERH K S G H K K 2 1 0 0 0 0 3 2 1 0 0 1 0 0 1 3 0 0 0 1 0 0 15 1 1539.7277 O00257 O00257 281 295 CBX4 E3 SUMO-protein ligase CBX4 yes yes 3 0.0041823 56.139 By MS/MS By MS/MS By MS/MS 1 1 1 4214800 1402800 1743000 1068900 2570 971 2727 8053;8054;8055 5633;5634;5635 5635 1282 3 SGFGEISSPVIR ________________ EISSPVIREAEVTRTA R S G I R E 0 1 0 0 0 0 1 2 0 2 0 0 0 1 1 3 0 0 0 1 0 0 12 0 1247.651 G3V1T4;P57740 G3V1T4 4 15 NUP107 Nuclear pore complex protein Nup107 yes no 2 0.0009101 85.554 By MS/MS By MS/MS By MS/MS 1 1 1 13829000 5277600 4187100 4364300 2571 710 2728 8056;8057;8058 5636;5637;5638 5638 956;957 3 SGGLYFLPPSARGAWSGARV CQKLEEMRSGGLYFLP GAWSGARV________ R S G R V - 3 2 0 0 0 0 0 4 0 0 2 0 0 1 2 3 0 1 1 1 0 0 20 2 2048.0592 D6R9F0 D6R9F0 329 348 LGR6 yes yes 3 0.015722 41.871 By matching By MS/MS By matching 1 1 1 5325100 2208100 2614700 502290 2572 478 2729 8059;8060;8061 5639 5639 621;622 1 SGGSGHAVAEPASPEQELDQNKGK VSRKSRPKSGGSGHAV ELDQNKGKGRDVESVQ K S G G K G 3 0 1 1 0 2 3 4 1 0 1 2 0 0 2 3 0 0 0 1 0 0 24 1 2392.1255 P46013 P46013 296 319 MKI67 Antigen KI-67 yes yes 3 0.0013336 54.12 By MS/MS By matching By MS/MS 1 1 1 6333300 2777300 1916700 1639300 2573 1241 2730 8062;8063;8064 5640;5641 5641 1611 2 SGGVTEASSLLGGSPR YSTRGDQRSGGVTEAS SLLGGSPRRPCGRKGS R S G P R R 1 1 0 0 0 0 1 4 0 0 2 0 0 0 1 4 1 0 0 1 0 0 16 0 1473.7423 Q92729 Q92729 840 855 PTPRU Receptor-type tyrosine-protein phosphatase U yes yes 2 0.00022497 82.349 By MS/MS By matching By matching 1 1 1 2049000 812090 611930 624980 2574 1706 2731 8065;8066;8067 5642 5642 2343 1 SGKNSQEDSEDSEDKDVK REAKNKRRSGKNSQED DSEDKDVKTKKDDSHS R S G V K T 0 0 1 4 0 1 3 1 0 0 0 3 0 0 0 4 0 0 0 1 0 0 18 2 1995.8505 Q9H1E3 Q9H1E3 50 67 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 3.2261E-25 120.9 By MS/MS By MS/MS By MS/MS 2 3 4 70636000 26167000 17010000 27459000 2575 1813 2732;2733 8068;8069;8070;8071;8072;8073;8074;8075;8076 5643;5644;5645;5646;5647;5648 5644 2536;2537;2538;2539 6 SGLTVPTSPK DSGSDALRSGLTVPTS LTVPTSPKGRLLDRRS R S G P K G 0 0 0 0 0 0 0 1 0 0 1 1 0 0 2 2 2 0 0 1 0 0 10 0 985.54441 Q53EL6;Q5VZS7 Q53EL6 87 96 PDCD4 Programmed cell death protein 4 yes no 2 0.0037719 76.326 By matching By MS/MS By MS/MS 1 1 1 119580000 42435000 43006000 34136000 2576 1476 2734 8077;8078;8079 5649;5650 5650 1980;1981;3401 2 SGLTVPTSPKGR DSGSDALRSGLTVPTS VPTSPKGRLLDRRSRS R S G G R L 0 1 0 0 0 0 0 2 0 0 1 1 0 0 2 2 2 0 0 1 0 0 12 1 1198.667 Q53EL6;Q5VZS7 Q53EL6 87 98 PDCD4 Programmed cell death protein 4 yes no 2 0.003946 80.312 By MS/MS By MS/MS By MS/MS 1 1 2 4123700 921230 954970 2247500 2577 1476 2735 8080;8081;8082;8083 5651;5652;5653 5653 1980;1981;3401 3 SGNTFRPEVHLLPPPSEELALNELVTLTCLAR PLTATLSKSGNTFRPE VTLTCLARGFSPKDVL K S G A R G 2 2 2 0 1 0 4 1 1 0 7 0 0 1 4 2 3 0 0 2 0 0 32 1 3572.8661 P01876;A0A0G2JMB2;P01877 P01876 222 253 IGHA1;IGHA2 Ig alpha-1 chain C region;Ig alpha-2 chain C region yes no 4 2.591E-13 71.608 By MS/MS By MS/MS By MS/MS 1 1 1 19245000 7020500 5267000 6957700 2578 1091 2736 8084;8085;8086 5654;5655;5656;5657 5655 4 SGPLEACYGELGQSR SRMLRQQRSGPLEACY YGELGQSRMYFNASGP R S G S R M 1 1 0 0 1 1 2 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 15 0 1622.7359 Q9NXD2 Q9NXD2 701 715 MTMR10 Myotubularin-related protein 10 yes yes 2 0.0052442 56.936 By matching By matching By MS/MS 1 1 1 2656600 939470 711890 1005300 2579 1874 2737 8087;8088;8089 5658 5658 3922 1 SGSAAQAEGLCK AGLRKRGRSGSAAQAE AQAEGLCKQWLQRAWQ R S G C K Q 3 0 0 0 1 1 1 2 0 0 1 1 0 0 0 2 0 0 0 0 0 0 12 0 1177.5397 F8WF93;H7BZZ2;F8WE30;H7C0X4;Q92685 F8WF93 11 22 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase yes no 2 0.0017566 78.964 By MS/MS By MS/MS By MS/MS 1 2 2 4378300 1092900 1897300 1388100 2580 702 2738 8090;8091;8092;8093;8094 5659;5660;5661 5661 941 3 SGSGISVISSTSVDQR PPSFRRVRSGSGISVI SSTSVDQRLPEEPVLE R S G Q R L 0 1 0 1 0 1 0 2 0 2 0 0 0 0 0 6 1 0 0 2 0 0 16 0 1578.7849 D6PAW0;C9JQZ7;A8CTZ0;F8W7U0;Q15811 D6PAW0 197 212 ITSN1 Intersectin-1 yes no 2 0.0032088 57.288 By MS/MS By matching 1 1 6314700 3318700 0 2996000 2581 315 2739 8095;8096 5662 5662 415;416 1 SGSKENVQETQI IHEPLLFKSGSKENVQ ENVQETQI________ K S G Q I - 0 0 1 0 0 2 2 1 0 1 0 1 0 0 0 2 1 0 0 1 0 0 12 1 1318.6365 Q9NT99 Q9NT99 702 713 LRRC4B Leucine-rich repeat-containing protein 4B yes yes 2 0.0016564 85.45 By MS/MS 1 818490 818490 0 0 2582 1859 2740 8097 5663 5663 2619 1 SGSMDPSGAHPSVR RMSRSSGRSGSMDPSG SGAHPSVRQTPSRQPP R S G V R Q 1 1 0 1 0 0 0 2 1 0 0 0 1 0 2 4 0 0 0 1 0 0 14 0 1383.6201 Q07666 Q07666 18 31 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 2 2.183E-16 135.14 By MS/MS By MS/MS By MS/MS 2 3 3 217160000 79606000 69593000 67956000 2583 1352 2741;2742 8098;8099;8100;8101;8102;8103;8104;8105 5664;5665;5666;5667;5668;5669 5668 136 1774;1775 6 SGSPNLPHSVSSYK PHREKYPRSGSPNLPH PHSVSSYKSREDGYYR R S G Y K S 0 0 1 0 0 0 0 1 1 0 1 1 0 0 2 5 0 0 1 1 0 0 14 0 1458.7103 Q5T481 Q5T481 740 753 RBM20 RNA-binding protein 20 yes yes 3 0.0028941 58.595 By MS/MS 1 710480 0 0 710480 2584 1505 2743 8106 5670 5670 2035;2036 1 SGSSSPDSEITELK PRDTYSDRSGSSSPDS DSEITELKFPSINHD_ R S G L K F 0 0 0 1 0 0 2 1 0 1 1 1 0 0 1 5 1 0 0 0 0 0 14 0 1435.6678 P17812 P17812 571 584 CTPS1 CTP synthase 1 yes yes 2 4.5284E-08 106.58 By MS/MS By MS/MS By MS/MS 1 1 1 7448900 2020900 2957200 2470800 2585 1168 2744 8107;8108;8109 5671;5672;5673 5673 1512;1513;1514 3 SGSSSPDSEITELKFPSINHD PRDTYSDRSGSSSPDS KFPSINHD________ R S G H D - 0 0 1 2 0 0 2 1 1 2 1 1 0 1 2 6 1 0 0 0 0 0 21 1 2246.0339 P17812 P17812 571 591 CTPS1 CTP synthase 1 yes yes 2 0.016051 47.532 By MS/MS By matching By matching 1 1 1 4533000 2292000 929260 1311700 2586 1168 2745 8110;8111;8112 5674 5674 1512;1513;1514 1 SGSVYEPLK SPSSAFLRSGSVYEPL GSVYEPLKSINLPRPD R S G L K S 0 0 0 0 0 0 1 1 0 0 1 1 0 0 1 2 0 0 1 1 0 0 9 0 978.50221 I3L3F2;H3BV13;H3BQ89;Q93100 I3L3F2 18 26 PHKB Phosphorylase b kinase regulatory subunit beta yes no 2 0.0092257 62.582 By MS/MS 1 0 0 0 0 2587 833 2746 8113 5675 5675 3719 1 SGSYSYLEER RYDSLLGRSGSYSYLE SYSYLEERKPYSSRLE R S G E R K 0 1 0 0 0 0 2 1 0 0 1 0 0 0 0 3 0 0 2 0 0 0 10 0 1189.5251 O14974;A0A0U1RQZ1;H0YIM2;H0YIS3 O14974 908 917 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.0020059 90.108 By MS/MS By MS/MS By MS/MS 2 2 2 7774000 2763100 2812400 2198600 2588 986 2747 8114;8115;8116;8117;8118;8119 5676;5677;5678;5679 5676 1321;3746 4 SGTSSPQSPVFR LGLAIEPKSGTSSPQS SPQSPVFRHRTLENSP K S G F R H 0 1 0 0 0 1 0 1 0 0 0 0 0 1 2 4 1 0 0 1 0 0 12 0 1248.6099 Q8N556 Q8N556 661 672 AFAP1 Actin filament-associated protein 1 yes yes 2 0.00034421 99.011 By MS/MS By MS/MS By MS/MS 1 1 1 6726000 2420100 2349800 1956100 2589 1633 2748 8120;8121;8122 5680;5681;5682 5680 2237;2238 3 SGVITLSNHRKQR TSFLMDSKSGVITLSN LSNHRKQRMEPLYSLN K S G Q R M 0 2 1 0 0 1 0 1 1 1 1 1 0 0 0 2 1 0 0 1 0 0 13 2 1494.8379 E9PQ73;Q8TDW7 E9PQ73 2298 2310 FAT3 Protocadherin Fat 3 yes no 3 0.011772 40.857 By matching By matching By MS/MS 1 1 1 2545900 790560 684020 1071400 2590 617 2749 8123;8124;8125 5683 5683 836;3103 1 SGVSLAALK AVAASKERSGVSLAAL GVSLAALKKALAAAGY R S G L K K 2 0 0 0 0 0 0 1 0 0 2 1 0 0 0 2 0 0 0 1 0 0 9 0 844.50182 P10412;P16403;P16402 P10412 55 63 HIST1H1E;HIST1H1C;HIST1H1D Histone H1.4;Histone H1.2;Histone H1.3 yes no 2 0.015576 69.812 By matching By MS/MS By matching 1 1 1 3982400 770080 2904800 307500 2591 1137 2750 8126;8127;8128 5684 5684 1 SGVTNMSSPHK SQTVARNRSGVTNMSS TNMSSPHKNSVPSSLN R S G H K N 0 0 1 0 0 0 0 1 1 0 0 1 1 0 1 3 1 0 0 1 0 0 11 0 1143.5343 Q9NVG8 Q9NVG8 177 187 TBC1D13 TBC1 domain family member 13 yes yes 2 0.0054871 86.911 By matching By MS/MS By matching 1 1 1 3025700 1054200 1289100 682380 2592 1864 2751 8129;8130;8131 5685 5685 169 2632 1 SGYHDDSDEDLLE DTASHTNKSGYHDDSD DSDEDLLE________ K S G L E - 0 0 0 4 0 0 2 1 1 0 2 0 0 0 0 2 0 0 1 0 0 0 13 0 1493.5794 Q99523 Q99523 819 831 SORT1 Sortilin yes yes 2 4.1959E-16 134.75 By MS/MS By MS/MS By MS/MS 1 1 1 16823000 6843900 5164800 4814300 2593 1765 2752 8132;8133;8134 5686;5687;5688 5687 2447 3 SHCIAEVENDEMPADLPSLAADFVESK CEKPLLEKSHCIAEVE AADFVESKDVCKNYAE K S H S K D 4 0 1 3 1 0 4 0 1 1 2 1 1 1 2 3 0 0 0 2 0 0 27 0 2973.3372 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2 A0A0C4DGB6 311 337 ALB Serum albumin yes no 3 5.1303E-52 112.26 By MS/MS By matching By MS/MS 1 1 1 18042000 8860400 3654000 5527700 + 2594 194 2753 8135;8136;8137 5689;5690 5689 19 2 SHGLEPAAPSPR LQLEAHLRSHGLEPAA EPAAPSPRLRPEESLD R S H P R L 2 1 0 0 0 0 1 1 1 0 1 0 0 0 3 2 0 0 0 0 0 0 12 0 1217.6153 Q9ULL5 Q9ULL5 35 46 PRR12 Proline-rich protein 12 yes yes 2 0.013617 53.754 By MS/MS By MS/MS By matching 1 1 1 4602900 1691900 1692300 1218700 2595 1928 2754 8138;8139;8140 5691;5692 5692 2722 2 SHHAPMSPGSSGGGGQPLAR ASGGAQQRSHHAPMSP GGGQPLARTPQPSSPM R S H A R T 2 1 0 0 0 1 0 5 2 0 1 0 1 0 3 4 0 0 0 0 0 0 20 0 1886.8806 O14497 O14497 357 376 ARID1A AT-rich interactive domain-containing protein 1A yes yes 3 8.9648E-14 93.551 By MS/MS By MS/MS By matching 1 1 1 6293600 1970200 2175100 2148200 2596 979 2755 8141;8142;8143 5693;5694 5693 1298 2 SHILEDDENSVDISMLK ASGRPRQRSHILEDDE SVDISMLKTGSSLLKE R S H L K T 0 0 1 3 0 0 2 0 1 2 2 1 1 0 0 3 0 0 0 1 0 0 17 0 1943.9146 O75717 O75717 374 390 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes yes 3 0.0080977 51.591 By MS/MS 1 845900 0 0 845900 2597 1040 2756 8144 5695 5695 1398 1 SHKPLPQGTMMETLSR LKVDVYGRSHKPLPQG TMMETLSRYKFYLAFE R S H S R Y 0 1 0 0 0 1 1 1 1 0 2 1 2 0 2 2 2 0 0 0 0 0 16 1 1811.9022 P51993 P51993 224 239 FUT6 Alpha-(1,3)-fucosyltransferase 6 yes yes 2 0.0082615 42.556 By matching By MS/MS By matching 1 1 1 24196000 8259000 9578200 6358900 2598 1283 2757 8145;8146;8147 5696 5696 1691;3338;3339 1 SHSPSSPDPDTPSPVGDSR SPHLDSSRSHSPSSPD PSPVGDSRALQASRNT R S H S R A 0 1 0 3 0 0 0 1 1 0 0 0 0 0 5 6 1 0 0 1 0 0 19 0 1920.845 H0YDB2;E9PNJ4;Q13586;G0XQ39 H0YDB2 378 396 STIM1 Stromal interaction molecule 1 yes no 2;3 0.0012791 61.477 By MS/MS By matching By matching 2 2 2 5680100 2209200 1728400 1742500 2599 611 2758 8148;8149;8150;8151;8152;8153 5697;5698 5698 829 2 SHSQASLAGPGPVDPSNR YWNGKLLRSHSQASLA GPVDPSNRSNSMLELA R S H N R S 2 1 1 1 0 1 0 2 1 0 1 0 0 0 3 4 0 0 0 1 0 0 18 0 1775.8551 A2A3M4;A6PVU7;Q9P2M7 A2A3M4 135 152 CGN Cingulin yes no 2;3 1.5822E-10 93.342 By MS/MS By MS/MS By MS/MS 2 2 2 7973200 2946200 2952700 2074300 2600 297 2759 8154;8155;8156;8157;8158;8159 5699;5700;5701;5702 5701 392;393;394 4 SHSWVNSAYAPGGSK LASKGIDRSHSWVNSA AYAPGGSKAVLRRAPP R S H S K A 2 0 1 0 0 0 0 2 1 0 0 1 0 0 1 4 0 1 1 1 0 0 15 0 1546.7165 K7EKT0;K7ESB7 K7EKT0 112 126 DOCK6 yes no 2 0.0065389 53.924 By MS/MS 1 943420 943420 0 0 2601 940 2760 8160 5703 5703 1249 1 SHVSSEAIIWVSNK LTIVVGNRSHVSSEAI AIIWVSNKSEHHRITY R S H N K S 1 0 1 0 0 0 1 0 1 2 0 1 0 0 0 4 0 1 0 2 0 0 14 0 1555.7995 Q9UKU6 Q9UKU6 651 664 TRHDE Thyrotropin-releasing hormone-degrading ectoenzyme yes yes 2 0.013025 45.598 By MS/MS By matching 1 1 2482400 0 1460400 1022000 2602 1918 2761 8161;8162 5704 5704 2708;2709 0 SHWDDSTSDSELEK PSPKESGRSHWDDSTS TSDSELEKGAREQPEK R S H E K G 0 0 0 3 0 0 2 0 1 0 1 1 0 0 0 4 1 1 0 0 0 0 14 0 1634.6696 E9PGC8;P78559 E9PGC8 2337 2350 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.014634 53.946 By matching By MS/MS By matching 1 1 1 3339400 1133700 1266600 939140 2603 582 2762 8163;8164;8165 5705 5705 3085 0 SHYADVDPENQNFLLESNLGK PTKQAALKSHYADVDP LLESNLGKKKYETEFN K S H G K K 1 0 3 2 0 1 2 1 1 0 3 1 0 1 1 2 0 0 1 1 0 0 21 0 2389.1186 F8VUY8;Q96QD8 F8VUY8 39 59 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 3 0.0015908 52.03 By MS/MS By matching By MS/MS 1 1 1 9695300 4975300 1998300 2721700 2604 673 2763 8166;8167;8168 5706;5707 5706 899;3693 2 SIEVENDFLPVEK KPIKLRPRSIEVENDF NDFLPVEKTIGKKLPA R S I E K T 0 0 1 1 0 0 3 0 0 1 1 1 0 1 1 1 0 0 0 2 0 0 13 0 1517.7613 Q5JPT1;Q5VSN0;Q5JPT2;Q96B97 Q5JPT1 177 189 SH3KBP1 SH3 domain-containing kinase-binding protein 1 yes no 2 7.5782E-12 114.7 By MS/MS By matching By MS/MS 1 1 1 10632000 3851800 3590000 3190200 2605 1483 2764 8169;8170;8171 5708;5709 5708 1990 2 SILAKPSSSPDPR LTSVMVPKSILAKPSS PSSSPDPRYLSVPPSP K S I P R Y 1 1 0 1 0 0 0 0 0 1 1 1 0 0 3 4 0 0 0 0 0 0 13 1 1353.7252 Q9BTC0 Q9BTC0 1011 1023 DIDO1 Death-inducer obliterator 1 yes yes 2 0.00015571 87.566 By MS/MS By matching By MS/MS 1 1 1 6170000 2115600 2221600 1832800 2606 1778 2765 8172;8173;8174 5710;5711 5710 2465;2466;2467 2 SILPYPVSPK GRTKSSYKSILPYPVS LPYPVSPKQKYSHVIL K S I P K Q 0 0 0 0 0 0 0 0 0 1 1 1 0 0 3 2 0 0 1 1 0 0 10 0 1099.6277 H3BP52;H3BTF4;Q8IWI9 H3BP52 917 926 MGA MAX gene-associated protein yes no 2 0.0041557 75.479 By MS/MS By MS/MS By MS/MS 2 3 2 2949300 897980 1058400 992940 2607 828 2766 8175;8176;8177;8178;8179;8180;8181 5712;5713;5714;5715;5716;5717;5718 5712 1113 7 SILSPGGSCGPIK VMVTDADRSILSPGGS GGSCGPIKVKTEPTED R S I I K V 0 0 0 0 1 0 0 3 0 2 1 1 0 0 2 3 0 0 0 0 0 0 13 0 1271.6544 P78347 P78347 207 219 GTF2I General transcription factor II-I yes yes 2 0.006124 63.292 By MS/MS By MS/MS 1 1 14457000 0 7092400 7364100 2608 1321 2767 8182;8183 5719;5720 5720 1725 2 SILVSPTGPSR AEFKKTDKSILVSPTG VSPTGPSRVAFDPEQK K S I S R V 0 1 0 0 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1112.619 Q14684 Q14684 702 712 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.0022892 80.69 By MS/MS By MS/MS By MS/MS 1 1 1 18407000 6291400 5736300 6379600 2609 1418 2768 8184;8185;8186 5721;5722;5723 5721 1890 3 SIMTDIKKDNR NRVDEDFRSIMTDIKK TDIKKDNRVTTLTTHA R S I N R V 0 1 1 2 0 0 0 0 0 2 0 2 1 0 0 1 1 0 0 0 0 0 11 2 1319.6867 Q8NCM8 Q8NCM8 1377 1387 DYNC2H1 Cytoplasmic dynein 2 heavy chain 1 yes yes 2 0.013716 48.423 By MS/MS 1 0 0 0 0 2610 1650 2769 8187 5724 5724 3463 1 SINKLDSPDPFK CPLPPGKRSINKLDSP LDSPDPFKLNDPFQPF R S I F K L 0 0 1 2 0 0 0 0 0 1 1 2 0 1 2 2 0 0 0 0 0 0 12 1 1359.7034 B1AUU8;P42566 B1AUU8 656 667 EPS15 Epidermal growth factor receptor substrate 15 yes no 2 0.013651 60.901 By matching By MS/MS By matching 1 1 1 1706400 492590 615260 598570 2611 333 2770 8188;8189;8190 5725 5725 461 1 SIPLECPLSSPK ALTGGEAKSIPLECPL ECPLSSPKGVLFSSKS K S I P K G 0 0 0 0 1 0 1 0 0 1 2 1 0 0 3 3 0 0 0 0 0 0 12 0 1326.6853 Q92667;I3L2A2;I3L2N7 Q92667 142 153 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.00045714 102.33 By MS/MS By MS/MS By MS/MS 1 1 1 22541000 7305700 8768800 6466500 2612 1704 2771 8191;8192;8193 5726;5727;5728 5726 2339;2340 3 SIPMTVDFIR ALNRNSDRSIPMTVDF PMTVDFIRLKSYCNDQ R S I I R L 0 1 0 1 0 0 0 0 0 2 0 0 1 1 1 1 1 0 0 1 0 0 10 0 1177.6165 P00492 P00492 92 101 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.00038262 83.862 By matching By matching By MS/MS 1 1 1 3242800 1419000 1147000 676880 2613 1080 2772 8194;8195;8196 5729 5729 3272 0 SIQDLTVTGTEPGQVSSR GNGQPRRRSIQDLTVT EPGQVSSRSSSPSVRM R S I S R S 0 1 0 1 0 2 1 2 0 1 1 0 0 0 1 3 3 0 0 2 0 0 18 0 1873.9381 Q9UG54;O43318 Q9UG54 93 110 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 2 0.0011878 73.928 By MS/MS By MS/MS By MS/MS 1 1 1 25451000 9519200 8640000 7292200 2614 1006 2773 8197;8198;8199 5730;5731;5732 5732 1339 3 SIQEIQELDKDDESLR NYKPPAQKSIQEIQEL DKDDESLRKYKEALLG K S I L R K 0 1 0 3 0 2 3 0 0 2 2 1 0 0 0 2 0 0 0 0 0 0 16 1 1916.9327 J3KS60;J3KRE2;J3KTF8;J3QQX2;J3KRY1;P52565 J3KS60 34 49 ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 3 0.0071252 46.68 By MS/MS By matching 1 1 1141200 0 716660 424500 2615 912 2774 8200;8201 5733 5733 1 SIRDTPAKNAQK EEKAPVKKSIRDTPAK TPAKNAQKSNQNGKDS K S I Q K S 2 1 1 1 0 1 0 0 0 1 0 2 0 0 1 1 1 0 0 0 0 0 12 2 1327.7208 P06748 P06748 195 206 NPM1 Nucleophosmin yes yes 3 0.0011216 86.777 By matching By MS/MS By matching 1 1 1 10122000 95731 9988600 37195 2616 1114 2775 8202;8203;8204 5734 5734 3278 1 SIRKYLTSNTAYGK QEEVENLKSIRKYLTS TSNTAYGKTGIRDVHL K S I G K T 1 1 1 0 0 0 0 1 0 1 1 2 0 0 0 2 2 0 2 0 0 0 14 2 1600.8573 Q8TE04 Q8TE04 272 285 PANK1 Pantothenate kinase 1 yes yes 2 0.01644 51.092 By MS/MS 1 0 0 0 0 2617 1674 2776 8205 5735 5735 3881 1 SISADDDLQESSR PTFQPFQRSISADDDL DDLQESSRRPQRKSLY R S I S R R 1 1 0 3 0 1 1 0 0 1 1 0 0 0 0 4 0 0 0 0 0 0 13 0 1421.627 P18615;A0A0A0MT02;A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 113 125 NELFE Negative elongation factor E yes no 2 9.6017E-28 146.77 By MS/MS By MS/MS By MS/MS 1 1 1 75617000 23655000 32706000 19256000 2618 1171 2777 8206;8207;8208 5736;5737;5738 5737 1520 3 SISADSFDQR KGKGKRERSISADSFD SADSFDQRDPGTPNDD R S I Q R D 1 1 0 2 0 1 0 0 0 1 0 0 0 1 0 3 0 0 0 0 0 0 10 0 1124.5098 O00512 O00512 102 111 BCL9 B-cell CLL/lymphoma 9 protein yes yes 2 0.0012739 103.43 By matching By MS/MS By MS/MS 1 1 1 3423900 873210 1568800 981790 2619 977 2778 8209;8210;8211 5739;5740 5739 1292 2 SISASKASPPGDLQNPK TQSLHSLRSISASKAS PGDLQNPKRARQDPT_ R S I P K R 2 0 1 1 0 1 0 1 0 1 1 2 0 0 3 4 0 0 0 0 0 0 17 1 1695.8792 O00273 O00273 308 324 DFFA DNA fragmentation factor subunit alpha yes yes 2 1.0315E-16 108.32 By MS/MS By MS/MS By MS/MS 1 1 1 12756000 5467000 3957800 3330900 2620 974 2779 8212;8213;8214 5741;5742;5743;5744 5743 1288 4 SISGTPAETPACK AAQSGLTRSISGTPAE PAETPACKSASETKVI R S I C K S 2 0 0 0 1 0 1 1 0 1 0 1 0 0 2 2 2 0 0 0 0 0 13 0 1317.6235 F8VWT9;J3KPF0;Q9Y4D8 F8VWT9 1361 1373 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 yes no 2 0.012997 51.726 By MS/MS By matching By matching 1 1 1 3148500 1328500 1009700 810250 2621 679 2780 8215;8216;8217 5745 5745 907 1 SISLSQSAENVPASK GFEFFRNRSISLSQSA AENVPASKFSLQKTLS R S I S K F 2 0 1 0 0 1 1 0 0 1 1 1 0 0 1 5 0 0 0 1 0 0 15 0 1516.7733 H0YFN7;Q4ADV7 H0YFN7 907 921 RIC1 RAB6A-GEF complex partner protein 1 yes no 2 5.3575E-07 94.007 By MS/MS By MS/MS By MS/MS 1 1 1 4203100 1747100 1324700 1131300 2622 793 2781 8218;8219;8220 5746;5747;5748 5747 1078 3 SISLYYTGEK QGTEIDGRSISLYYTG SLYYTGEKGQNQDYRG R S I E K G 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P19338;H7BY16 P19338 458 467 NCL Nucleolin yes no 2 0.016936 62.582 By MS/MS By matching 1 1 597760 276990 320770 0 2623 1175 2782 8221;8222 5749 5749 1 SISNEGLTLNNSHVSK TPNRGITRSISNEGLT LNNSHVSKHIRKNLSF R S I S K H 0 0 3 0 0 0 1 1 1 1 2 1 0 0 0 4 1 0 0 1 0 0 16 0 1698.8537 Q08AD1 Q08AD1 462 477 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes yes 2;3 1.5802E-06 88.471 By matching By MS/MS By matching 2 2 2 31563000 11345000 11805000 8412900 2624 1357 2783 8223;8224;8225;8226;8227;8228 5750;5751 5751 1781 2 SITLFVQEDR LLATGQWKSITLFVQE TLFVQEDRAQLYIDCE K S I D R A 0 1 0 1 0 1 1 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 10 0 1206.6245 P07996;CON__Q28194 P07996 155 164 THBS1 Thrombospondin-1 yes no 2 0.00020532 122.13 By MS/MS By MS/MS By MS/MS 1 1 1 2842800 1668400 522330 652070 + 2625 1124 2784 8229;8230;8231 5752;5753;5754 5754 3 SITVLVEGENTR VPVGNIPRSITVLVEG LVEGENTRIAQPGDHV R S I T R I 0 1 1 0 0 0 2 1 0 1 1 0 0 0 0 1 2 0 0 2 0 0 12 0 1316.6936 C9J8M6;P33993 C9J8M6 145 156 MCM7 DNA replication licensing factor MCM7 yes no 2 0.0024655 82.261 By MS/MS 1 259470 0 259470 0 2626 420 2785 8232 5755 5755 1 SIVAVEPR PRRRGRKKSIVAVEPR SIVAVEPRSLIQGAFQ K S I P R S 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 2 0 0 8 0 869.49707 Q5VZL5;H7C1I7 Q5VZL5 1181 1188 ZMYM4 Zinc finger MYM-type protein 4 yes no 2 0.013461 85.29 By matching By MS/MS By matching 1 1 1 8039900 3050100 2739800 2249900 2627 1525 2786 8233;8234;8235 5756 5756 2075 1 SIVPSSPQPQR SSLCRSRRSIVPSSPQ PSSPQPQRAQLAPHAP R S I Q R A 0 1 0 0 0 2 0 0 0 1 0 0 0 0 3 3 0 0 0 1 0 0 11 0 1194.6357 H7C5C6;H7C5K2;H7C5A5;H0Y860;Q9P246 H7C5C6 120 130 STIM2 Stromal interaction molecule 2 yes no 2 0.0038512 71.085 By MS/MS By matching By matching 1 1 1 3177200 1064700 1177700 934780 2628 769 2787 8236;8237;8238 5757 5757 1050 1 SIVSSSISAFTLPVIK GSKKCETKSIVSSSIS AFTLPVIKLNNCVIDE K S I I K L 1 0 0 0 0 0 0 0 0 3 1 1 0 1 1 5 1 0 0 2 0 0 16 0 1647.9447 Q86VY9 Q86VY9 279 294 TMEM200A Transmembrane protein 200A yes yes 2 0.011342 48.188 By matching By MS/MS 1 1 2743700 0 1477900 1265800 2629 1597 2788 8239;8240 5758 5758 2182;2183 1 SIYYITGESK SRMKETQKSIYYITGE YYITGESKEQVANSAF K S I S K E 0 0 0 0 0 0 1 1 0 2 0 1 0 0 0 2 1 0 2 0 0 0 10 0 1159.5761 P08238;Q58FF8 P08238 482 491 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 yes no 2 0.00015327 84.615 By MS/MS By matching By matching 1 1 1 2040600 488670 1329500 222490 2630 1126 2789 8241;8242;8243 5759 5759 0 SKAEAESLYQSKYEELQITAGR QNEDIAQKSKAEAESL ELQITAGRHGDSVRNS K S K G R H 3 1 0 0 0 2 4 1 0 1 2 2 0 0 0 3 1 0 2 0 0 0 22 2 2500.2445 CON__P04264;P04264 CON__P04264 365 386 KRT1 Keratin, type II cytoskeletal 1 yes no 4 0.0078372 46.368 By MS/MS By matching 1 1 937860 570520 367340 0 + 2631 469 2790 8244;8245 5760 5760 1 SKASPSSLLAK ________________ SPSSLLAKFSEDTLSS M S K A K F 2 0 0 0 0 0 0 0 0 0 2 2 0 0 1 4 0 0 0 0 0 0 11 1 1087.6237 J3QRT3 J3QRT3 2 12 KIAA0195 yes yes 2 0.015478 60.08 By matching By matching By MS/MS 1 1 1 1597700 748230 474790 374710 2632 924 2791 8246;8247;8248 5761 5761 1234;1235 1 SKESVPEFPLSPPK FELILSPRSKESVPEF EFPLSPPKKKDLSLEE R S K P K K 0 0 0 0 0 0 2 0 0 0 1 2 0 1 4 3 0 0 0 1 0 0 14 1 1540.8137 A2A2D0;P16949 A2A2D0 28 41 STMN1 Stathmin yes no 2;3 1.6043E-36 150.37 By MS/MS By MS/MS By MS/MS 2 2 2 13814000 6911900 3855200 3046500 2633 293 2792 8249;8250;8251;8252;8253;8254 5762;5763;5764;5765;5766;5767;5768;5769 5766 389 8 SKLRIMSPMR TSSLSPQRSKLRIMSP LRIMSPMRTGNTYSRN R S K M R T 0 2 0 0 0 0 0 0 0 1 1 1 2 0 1 2 0 0 0 0 0 0 10 2 1217.6737 Q03164 Q03164 2205 2214 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 3 0.013206 46.844 By MS/MS 1 0 0 0 0 2634 1339 2793 8255 5770 5770 1755 1 SKLSPSPSLR EVSPEVVRSKLSPSPS LSPSPSLRKSSKSPKR R S K L R K 0 1 0 0 0 0 0 0 0 0 2 1 0 0 2 4 0 0 0 0 0 0 10 1 1070.6084 Q5T200;A0A087WX14 Q5T200 204 213 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.012743 65.179 By MS/MS 1 5344600 0 0 5344600 2635 1501 2794 8256 5771 5771 2029 1 SKNLPQVSK HSWPCPERSKNLPQVS KNLPQVSKQLRNRAG_ R S K S K Q 0 0 1 0 0 1 0 0 0 0 1 2 0 0 1 2 0 0 0 1 0 0 9 1 999.57129 Q8N9X5 Q8N9X5 123 131 TMEM75 Transmembrane protein 75 yes yes 2 0.010089 69.198 By MS/MS By matching 1 1 663430 0 318370 345060 2636 1645 2795 8257;8258 5772 5772 2249 1 SKPIPIMPASPQK EELLAEEKSKPIPIMP IMPASPQKGHAVNLLD K S K Q K G 1 0 0 0 0 1 0 0 0 2 0 2 1 0 4 2 0 0 0 0 0 0 13 1 1392.7799 G8JLD5;O00429 G8JLD5 583 595 DNM1L Dynamin-1-like protein yes no 2 4.1079E-05 102.63 By MS/MS By MS/MS By MS/MS 2 2 1 10452000 4360400 3310400 2780800 2637 742 2796;2797 8259;8260;8261;8262;8263 5773;5774;5775 5774 54 1008 3 SKQSEVPWASIALR PRTSSPSRSKQSEVPW PWASIALRPTQGDRPQ R S K L R P 2 1 0 0 0 1 1 0 0 1 1 1 0 0 1 3 0 1 0 1 0 0 14 1 1570.8467 Q9H2D6 Q9H2D6 927 940 TRIOBP TRIO and F-actin-binding protein yes yes 2 0.014794 45.014 By matching By matching By MS/MS 1 1 1 660870 257320 239660 163880 2638 1815 2798 8264;8265;8266 5776 5776 2543;2544 0 SKSDSYTLDPDTLR KLDPPRERSKSDSYTL TLDPDTLRKKKMPLTE R S K L R K 0 1 0 3 0 0 0 0 0 0 2 1 0 0 1 3 2 0 1 0 0 0 14 1 1596.7631 O75592 O75592 2831 2844 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 6.013E-06 77.726 By MS/MS By MS/MS By MS/MS 1 1 1 7435100 2924100 2185400 2325600 2639 1037 2799 8267;8268;8269 5777;5778;5779 5778 1394 1 SKSEDMDNVQSK NEFSRRKRSKSEDMDN DMDNVQSKRRRYMEEE R S K S K R 0 0 1 2 0 1 1 0 0 0 0 2 1 0 0 3 0 0 0 1 0 0 12 1 1366.6035 Q6VMQ6 Q6VMQ6 557 568 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 2 1.326E-07 116.9 By MS/MS By MS/MS By matching 2 2 1 6977300 2810200 3060200 1107000 2640 1562 2800;2801 8270;8271;8272;8273;8274 5780;5781;5782 5782 152 2120;2121 2 SKSEDMDNVQSKR NEFSRRKRSKSEDMDN MDNVQSKRRRYMEEEY R S K K R R 0 1 1 2 0 1 1 0 0 0 0 2 1 0 0 3 0 0 0 1 0 0 13 2 1522.7046 Q6VMQ6 Q6VMQ6 557 569 ATF7IP Activating transcription factor 7-interacting protein 1 yes yes 3 0.0076054 50.467 By matching By MS/MS By matching 1 1 1 1740100 632620 729810 377680 2641 1562 2802 8275;8276;8277 5783 5783 152 2120;2121 1 SKSEEAHAEDSVMDHHFR KKGFVLHKSKSEEAHA SVMDHHFRKPANDITS K S K F R K 2 1 0 2 0 0 3 0 3 0 0 1 1 1 0 3 0 0 0 1 0 0 18 1 2110.9127 Q8NC51 Q8NC51 328 345 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 3;4;5 3.7343E-10 96.55 By MS/MS By MS/MS By MS/MS 4 4 4 155710000 59289000 44053000 52365000 2642 1649 2803;2804 8278;8279;8280;8281;8282;8283;8284;8285;8286;8287;8288;8289 5784;5785;5786;5787;5788;5789;5790;5791 5784 157 2254;2255 8 SKSETGDSSIFR REKPLKRRSKSETGDS TGDSSIFRKLRNAKGE R S K F R K 0 1 0 1 0 0 1 1 0 1 0 1 0 1 0 4 1 0 0 0 0 0 12 1 1312.6259 O43166 O43166 286 297 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes yes 2 0.015273 59.248 By MS/MS By MS/MS By matching 1 1 1 2674700 891880 1092800 689980 2643 1001 2805 8290;8291;8292 5792;5793 5793 1333 2 SKSPSPPRLTEDR SSQGLKEKSKSPSPPR PPRLTEDRKKASLVAL K S K D R K 0 2 0 1 0 0 1 0 0 0 1 1 0 0 3 3 1 0 0 0 0 0 13 2 1468.7634 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 326 338 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.0064874 49.356 By MS/MS By matching 1 1 3911300 2289300 0 1622000 2644 532 2806 8293;8294 5794 5794 688;3060 1 SKSRSQSSSR NSRSHSSRSKSRSQSS SRSQSSSRSRSRSHSR R S K S R S 0 2 0 0 0 1 0 0 0 0 0 1 0 0 0 6 0 0 0 0 0 0 10 2 1108.5585 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09;E9PJA7 E9PK91 13 22 BCLAF1 Bcl-2-associated transcription factor 1 yes no 2 0.0045096 57.567 By MS/MS 1 11168000 0 11168000 0 2645 596 2807 8295 5795 5795 800;801;802 1 SKSSSETNPESQNSK HENEQSKKSKSSSETN NPESQNSKTVSKNCSQ K S K S K T 0 0 2 0 0 1 2 0 0 0 0 2 0 0 1 6 1 0 0 0 0 0 15 1 1608.7227 P35663 P35663 175 189 CYLC1 Cylicin-1 yes yes 3 0.01404 47.568 By MS/MS 1 0 0 0 0 2646 1224 2808 8296 5796 5796 1583;1584 1 SKSVIEQVSWDT TRQLRNIRSKSVIEQV IEQVSWDT________ R S K D T - 0 0 0 1 0 1 1 0 0 1 0 1 0 0 0 3 1 1 0 2 0 0 12 1 1377.6776 H0Y7E2;Q6WCQ1 H0Y7E2 1080 1091 MPRIP Myosin phosphatase Rho-interacting protein yes no 2 0.0044665 74.537 By matching By matching By MS/MS 1 1 1 2276300 828360 675540 772440 2647 767 2809 8297;8298;8299 5797 5797 1048 1 SKSVKEDSNLTLQEK KTPDKMKKSKSVKEDS SNLTLQEKKEKIQTGL K S K E K K 0 0 1 1 0 1 2 0 0 0 2 3 0 0 0 3 1 0 0 1 0 0 15 2 1704.8894 H0YLE8;P46940 H0YLE8 869 883 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 3 0.00012823 86.573 By MS/MS By MS/MS By MS/MS 1 1 1 7481500 3688600 2201000 1591900 2648 801 2810 8300;8301;8302 5798;5799;5800 5799 1090 3 SKTDNSSLSSPLNPK PDRKPSKKSKTDNSSL LSSPLNPKLWCHVHLK K S K P K L 0 0 2 1 0 0 0 0 0 0 2 2 0 0 2 5 1 0 0 0 0 0 15 1 1573.7948 Q9UIG0 Q9UIG0 321 335 BAZ1B Tyrosine-protein kinase BAZ1B no no 1 NaN 0 0 0 0 2649 1907 0 SKVGSTENIK APDLKNVRSKVGSTEN VGSTENIKHQPGGGRA R S K I K H 0 0 1 0 0 0 1 1 0 1 0 2 0 0 0 2 1 0 0 1 0 0 10 1 1061.5717 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4 E7EVA0 2082 2091 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 4.9238E-09 139.19 By MS/MS By MS/MS By MS/MS 2 2 2 20371000 7414000 7572300 5384800 2650 551 2811 8303;8304;8305;8306;8307;8308 5801;5802;5803;5804;5805;5806;5807;5808 5802 731;3073 8 SLALMYESEK ATAASTSRSLALMYES ALMYESEKVGVASSEE R S L E K V 1 0 0 0 0 0 2 0 0 0 2 1 1 0 0 2 0 0 1 0 0 0 10 0 1169.5638 O95721 O95721 63 72 SNAP29 Synaptosomal-associated protein 29 yes yes 2 0.018482 54.784 By MS/MS 1 420380 0 0 420380 2651 1073 2812 8309 5809 5809 1443 1 SLAPDRSDDEHDPLDNTSRPR SSPTSYWKSLAPDRSD LDNTSRPRYSHSYLSD K S L P R Y 1 3 1 5 0 0 1 0 1 0 2 0 0 0 3 3 1 0 0 0 0 0 21 2 2392.1003 A0A0D9SFK2;Q92614 A0A0D9SFK2 1998 2018 MYO18A Unconventional myosin-XVIIIa yes no 4 0.0019541 60.949 By MS/MS By MS/MS By matching 1 1 1 5447800 2212800 1665400 1569700 2652 215 2813 8310;8311;8312 5810;5811 5811 298 2 SLDGASVNENHEIYMK SKRYTMSRSLDGASVN ENHEIYMKDSMSAAEV R S L M K D 1 0 2 1 0 0 2 1 1 1 1 1 1 0 0 2 0 0 1 1 0 0 16 0 1805.8254 A8K968;A0A0A0MRA8;A0A0A0MSA4;J3KT37;A0A0J9YW26;A0A1B0GTF8 A8K968 334 349 EPB41L3 yes no 3 0.00069261 65.038 By MS/MS 1 481990 0 481990 0 2653 129 2814 8313 5812 5812 3587 1 SLDIAPGDMLDKVAR SDFLLLGKSLDIAPGD DMLDKVARRLSLIKHP K S L A R R 2 1 0 3 0 0 0 1 0 1 2 1 1 0 1 1 0 0 0 1 0 0 15 1 1599.829 E5RGZ1;E7EVL7;Q9H4B0 E5RGZ1 45 59 OSGEPL1 Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial yes no 2 0.01838 45.359 By matching By matching By MS/MS 1 1 1 2099100 793640 701790 603640 2654 505 2815 8314;8315;8316 5813 5813 649 0 SLDNNYSTPNER SNMGSNTKSLDNNYST NYSTPNERGDHNRTLD K S L E R G 0 1 3 1 0 0 1 0 0 0 1 0 0 0 1 2 1 0 1 0 0 0 12 0 1408.6219 C9JZR2;O60716;H0YC95 C9JZR2 899 910 CTNND1 Catenin delta-1 yes no 2 0.0018104 73.841 By MS/MS By MS/MS By MS/MS 1 1 1 30678000 11446000 9911300 9320700 2655 459 2816 8317;8318;8319 5814;5815;5816 5816 604;3657 2 SLDNNYSTPNERGDHNR SNMGSNTKSLDNNYST NERGDHNRTLDRSGDL K S L N R T 0 2 4 2 0 0 1 1 1 0 1 0 0 0 1 2 1 0 1 0 0 0 17 1 1987.8732 C9JZR2;O60716;H0YC95 C9JZR2 899 915 CTNND1 Catenin delta-1 yes no 3 0.0017913 60.549 By MS/MS By MS/MS By matching 1 1 1 8348500 2723500 3708000 1917100 2656 459 2817 8320;8321;8322 5817;5818 5818 604;3657 2 SLEDLQLTHNK ESVGPLPKSLEDLQLT DLQLTHNKITKLGSFE K S L N K I 0 0 1 1 0 1 1 0 1 0 3 1 0 0 0 1 1 0 0 0 0 0 11 0 1296.6674 P51884 P51884 138 148 LUM Lumican yes yes 2;3 0.0013012 94.616 By MS/MS 2 1302300 1302300 0 0 2657 1280 2818 8323;8324 5819;5820 5820 2 SLEDPYSQQIR PRTTIFVKSLEDPYSQ DPYSQQIRLQQQQAQQ K S L I R L 0 1 0 1 0 2 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 0 11 0 1334.6466 A0A087WXK3;Q9NVH2 A0A087WXK3 120 130 INTS7 Integrator complex subunit 7 yes no 2 0.0025376 75.378 By MS/MS By MS/MS By matching 1 1 1 1346000 494890 419820 431320 2658 71 2819 8325;8326;8327 5821;5822 5822 89;3580 2 SLEEIYLFSLPIK LVKDMKIKSLEEIYLF YLFSLPIKAFVAIGDY K S L I K A 0 0 0 0 0 0 2 0 0 2 3 1 0 1 1 2 0 0 1 0 0 0 13 0 1550.8596 H0YEN5;P15880;E9PPT0;E9PMM9;E9PQD7;H3BNG3;H0YE27 H0YEN5 15 27 RPS2 40S ribosomal protein S2 yes no 2 5.919E-06 104.79 By MS/MS 1 1062200 0 1062200 0 2659 790 2820 8328 5823 5823 1 SLEGGGCPAR EEGKRSRRSLEGGGCP EGGGCPARAPEPGPTG R S L A R A 1 1 0 0 1 0 1 3 0 0 1 0 0 0 1 1 0 0 0 0 0 0 10 0 1002.4553 Q9Y613 Q9Y613 367 376 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.00099805 93.442 By matching By matching By MS/MS 1 1 1 1251800 379680 425910 446230 2660 1976 2821 8329;8330;8331 5824 5824 2826 1 SLEVIPEKANDETGE ADVQKPRRSLEVIPEK KANDETGE________ R S L G E - 1 0 1 1 0 0 4 1 0 1 1 1 0 0 1 1 1 0 0 1 0 0 15 1 1629.7734 Q9UPR0 Q9UPR0 1113 1127 PLCL2 Inactive phospholipase C-like protein 2 yes yes 2 0.004905 63.709 By MS/MS By matching By matching 1 1 1 4000600 1562000 1338300 1100200 2661 1939 2822 8332;8333;8334 5825 5825 2740 1 SLEYLDLSFNQIAR SAAFKGLKSLEYLDLS LSFNQIARLPSGLPVS K S L A R L 1 1 1 1 0 1 1 0 0 1 3 0 0 1 0 2 0 0 1 0 0 0 14 0 1667.8519 P51884 P51884 185 198 LUM Lumican yes yes 2;3 3.37E-146 228.84 By MS/MS By MS/MS By MS/MS 2 3 3 182840000 62253000 51615000 68970000 2662 1280 2823;2824 8335;8336;8337;8338;8339;8340;8341;8342 5826;5827;5828;5829;5830;5831;5832;5833 5832 7 SLFHYRQYSAGK KSRKVDSKSLFHYRQY YRQYSAGKAA______ K S L G K A 1 1 0 0 0 1 0 1 1 0 1 1 0 1 0 2 0 0 2 0 0 0 12 1 1455.7259 P31327 P31327 1487 1498 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial yes yes 2 0.016814 42.629 By MS/MS By matching 1 1 1418900 786030 0 632850 2663 1210 2825 8343;8344 5834 5834 1564;3776 0 SLGGAVGSVASGAR APAAPRSRSLGGAVGS GSVASGARAAQSPFSI R S L A R A 3 1 0 0 0 0 0 4 0 0 1 0 0 0 0 3 0 0 0 2 0 0 14 0 1187.6258 Q8NHG8 Q8NHG8 82 95 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 yes yes 2 0.00096527 79.614 By MS/MS By MS/MS By MS/MS 1 1 1 4709000 1513900 1655500 1539600 2664 1663 2826 8345;8346;8347 5835;5836;5837;5838 5835 2281 4 SLGKDGSLEDDEDEEDDLDEGVGGK MVENEVIKSLGKDGSL LDEGVGGKRRSMEVKP K S L G K R 0 0 0 7 0 0 5 5 0 0 3 2 0 0 0 2 0 0 0 1 0 0 25 1 2622.094 Q12789 Q12789 1605 1629 GTF3C1 General transcription factor 3C polypeptide 1 yes yes 3 0.01444 41.423 By MS/MS By matching By matching 1 1 1 8639800 3457300 3533200 1649200 2665 1363 2827 8348;8349;8350 5839 5839 1794 1 SLGNILQAKPTSSPAK AVAPAQEKSLGNILQA KPTSSPAKGPPQKAGP K S L A K G 2 0 1 0 0 1 0 1 0 1 2 2 0 0 2 3 1 0 0 0 0 0 16 1 1610.8992 J3KQ96;E7ETY2;Q13428 J3KQ96 571 586 TCOF1 Treacle protein yes no 2;3 5.825E-07 95.477 By MS/MS By MS/MS By matching 2 2 1 25773000 12407000 8553500 4812800 2666 545 2828 8351;8352;8353;8354;8355 5840;5841;5842 5840 712;713;3068 2 SLGNILQAKPTSSPAKGPPQK AVAPAQEKSLGNILQA PAKGPPQKAGPVAVQV K S L Q K A 2 0 1 0 0 2 0 2 0 1 2 3 0 0 4 3 1 0 0 0 0 0 21 2 2118.1797 J3KQ96;E7ETY2;Q13428 J3KQ96 571 591 TCOF1 Treacle protein yes no 3 0.012472 52.731 By matching By matching By MS/MS 1 1 1 22457000 8947900 7586100 5922900 2667 545 2829 8356;8357;8358 5843 5843 712;713;3068 1 SLGSASPGPGQPPLSSPTR SKSNGQPKSLGSASPG PPLSSPTRGGVKKVSG K S L T R G 1 1 0 0 0 1 0 3 0 0 2 0 0 0 5 5 1 0 0 0 0 0 19 0 1791.9115 Q9C0B5 Q9C0B5 679 697 ZDHHC5 Palmitoyltransferase ZDHHC5 yes yes 2 0.011618 47.729 By MS/MS By matching By matching 1 1 1 3149500 1019700 1190400 939370 2668 1803 2830 8359;8360;8361 5844 5844 2509;2510 1 SLKESEQESEEEILAQKK VEGNKGTKSLKESEQE EEILAQKKEQREEEVE K S L K K E 1 0 0 0 0 2 6 0 0 1 2 3 0 0 0 3 0 0 0 0 0 0 18 2 2104.0536 Q9BW71 Q9BW71 219 236 HIRIP3 HIRA-interacting protein 3 yes yes 3 0.0014421 66.853 By MS/MS By MS/MS By MS/MS 1 1 1 27311000 10053000 11172000 6086200 2669 1787 2831 8362;8363;8364 5845;5846;5847 5846 2480;2481 3 SLKLSPVQK MSLNSNEKSLKLSPVQ LKLSPVQKQKDHEFSK K S L Q K Q 0 0 0 0 0 1 0 0 0 0 2 2 0 0 1 2 0 0 0 1 0 0 9 1 998.61243 H7C4H4;Q92834 H7C4H4 37 45 RPGR X-linked retinitis pigmentosa GTPase regulator yes no 2 0.005386 123.01 By matching By MS/MS By MS/MS 1 1 1 3731100 1238400 1379100 1113600 2670 874 2832 8365;8366;8367 5848;5849 5848 1173 2 SLLSPLHR SSSGTAQRSLLSPLHR SLLSPLHRSGSVEDNY R S L H R S 0 1 0 0 0 0 0 0 1 0 3 0 0 0 1 2 0 0 0 0 0 0 8 0 921.5396 Q9BY84 Q9BY84 498 505 DUSP16 Dual specificity protein phosphatase 16 yes yes 2 0.013418 74.415 By MS/MS By matching 1 1 913020 0 572800 340220 2671 1797 2833 8368;8369 5850 5850 2497 1 SLLSSPTK KTYVSCLKSLLSSPTK SLLSSPTKDSKPNISA K S L T K D 0 0 0 0 0 0 0 0 0 0 2 1 0 0 1 3 1 0 0 0 0 0 8 0 831.47018 Q92667;I3NI36 Q92667 441 448 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 2 0.013709 90.15 By MS/MS By MS/MS By matching 1 1 1 2085700 708100 686640 690940 2672 1704 2834 8370;8371;8372 5851;5852 5851 2341;2342 2 SLPGPAPCLK APPLQSARSLPGPAPC PGPAPCLKHFPLDLRT R S L L K H 1 0 0 0 1 0 0 1 0 0 2 1 0 0 3 1 0 0 0 0 0 0 10 0 1038.5532 E9PJF6;H0YCL9;H0Y360;Q01433 E9PJF6 19 28 AMPD2 AMP deaminase 2 yes no 2 0.012577 59.426 By MS/MS By MS/MS 1 1 9711500 4986600 4724900 0 2673 593 2835 8373;8374 5853;5854 5854 788 2 SLPSSTTADGNILR EKMKLGFKSLPSSTTA TADGNILRRVNSAPLI K S L L R R 1 1 1 1 0 0 0 1 0 1 2 0 0 0 1 3 2 0 0 0 0 0 14 0 1430.7365 A0A087WU98;Q6P4D5 A0A087WU98 12 25 FAM122C Protein FAM122C yes no 2 0.0083629 52.5 By MS/MS 2 0 0 0 0 2674 37 2836 8375;8376 5855;5856 5855 5 40;41;42;2873;2874 2 SLPTTVPESPNYR PEPSTIARSLPTTVPE VPESPNYRNTRTPRTP R S L Y R N 0 1 1 0 0 0 1 0 0 0 1 0 0 0 3 2 2 0 1 1 0 0 13 0 1459.7307 A0A0B4J210;Q6PKG0;E5RH50;H0YC33 A0A0B4J210 766 778 LARP1 La-related protein 1 yes no 2;3 5.9133E-05 99.011 By MS/MS By MS/MS By MS/MS 3 3 2 88792000 30648000 32329000 25816000 2675 177 2837;2838 8377;8378;8379;8380;8381;8382;8383;8384 5857;5858;5859;5860 5859 244;245;2929 4 SLPTTVPESPNYRNTR PEPSTIARSLPTTVPE SPNYRNTRTPRTPRTP R S L T R T 0 2 2 0 0 0 1 0 0 0 1 0 0 0 3 2 3 0 1 1 0 0 16 1 1830.9224 A0A0B4J210;Q6PKG0;E5RH50;H0YC33 A0A0B4J210 766 781 LARP1 La-related protein 1 yes no 3 0.01384 52.891 By MS/MS 1 0 0 0 0 2676 177 2839 8385 5861 5861 244;245;2929 1 SLPVSVPVWGFK LPTQQYAKSLPVSVPV SVPVWGFKEKRTEARS K S L F K E 0 0 0 0 0 0 0 1 0 0 1 1 0 1 2 2 0 1 0 3 0 0 12 0 1314.7336 Q96B36 Q96B36 183 194 AKT1S1 Proline-rich AKT1 substrate 1 yes yes 2 0.0006748 97.779 By matching By MS/MS By MS/MS 1 1 1 4630400 2184800 1331000 1114600 2677 1721 2840 8386;8387;8388 5862;5863 5863 2364 2 SLQDIIAILGMDELSEEDKLTVSR QKILQDYKSLQDIIAI EDKLTVSRARKIQRFL K S L S R A 1 1 0 3 0 1 3 1 0 3 4 1 1 0 0 3 1 0 0 1 0 0 24 1 2674.3735 P06576;F8W079 P06576 433 456 ATP5B ATP synthase subunit beta, mitochondrial yes no 3 3.662E-08 82.593 By MS/MS By MS/MS By matching 1 1 1 9091100 4162500 3052700 1876000 2678 1112 2841 8389;8390;8391 5864;5865 5864 85 2 SLQQLAEER KELNERWRSLQQLAEE LQQLAEERSQLLGSAH R S L E R S 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 9 0 1072.5513 A0A0D9SF54;A0A0D9SGF6;Q13813 A0A0D9SF54 1197 1205 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 2 0.0069835 72.34 By MS/MS 1 1165700 0 0 1165700 2679 212 2842 8392 5866 5866 295 1 SLSASPALGSTK IRGRAKSRSLSASPAL SPALGSTKEFRRTRSL R S L T K E 2 0 0 0 0 0 0 1 0 0 2 1 0 0 1 4 1 0 0 0 0 0 12 0 1117.5979 O95544 O95544 46 57 NADK NAD kinase yes yes 2 0.00032889 89.189 By MS/MS By MS/MS By MS/MS 1 1 1 4495600 1578400 1632700 1284500 2680 1070 2843 8393;8394;8395 5867;5868;5869;5870 5870 1438 4 SLSDSESDDSK EKDGTKRKSLSDSESD DSESDDSKSKKKRDAA K S L S K S 0 0 0 3 0 0 1 0 0 0 1 1 0 0 0 5 0 0 0 0 0 0 11 0 1168.4732 Q13185;S4R2Y4 Q13185 93 103 CBX3 Chromobox protein homolog 3 yes no 2 5.1101E-05 109.16 By MS/MS By MS/MS By MS/MS 2 2 1 9415400 2915600 3999500 2500300 2681 1380 2844 8396;8397;8398;8399;8400 5871;5872;5873;5874;5875;5876;5877;5878;5879 5877 1826;1827;1828;1829 9 SLSDSESDDSKSK EKDGTKRKSLSDSESD ESDDSKSKKKRDAADK K S L S K K 0 0 0 3 0 0 1 0 0 0 1 2 0 0 0 6 0 0 0 0 0 0 13 1 1383.6001 Q13185;S4R2Y4 Q13185 93 105 CBX3 Chromobox protein homolog 3 yes no 2 0.00045091 84.734 By MS/MS By MS/MS By MS/MS 1 2 2 8368300 2835900 3083300 2449100 2682 1380 2845 8401;8402;8403;8404;8405 5880;5881;5882;5883 5883 1826;1827;1828;1829 4 SLSESSVIMDR SPGLARKRSLSESSVI ESSVIMDRAPSVYSFF R S L D R A 0 1 0 1 0 0 1 0 0 1 1 0 1 0 0 4 0 0 0 1 0 0 11 0 1222.5864 A0A0C4DGM5;Q9H2Y7;H3BNX5 A0A0C4DGM5 44 54 ZNF106 Zinc finger protein 106 yes no 2 0.0028813 73.067 By MS/MS By MS/MS 1 1 1718900 802540 0 916380 2683 204 2846 8406;8407 5884;5885 5885 286 2 SLSETVTHR SKLSPTKRSLSETVTH LSETVTHRAKIMKIAT R S L H R A 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 2 2 0 0 1 0 0 9 0 1028.5251 A0A1B0GUI1 A0A1B0GUI1 1081 1089 yes yes 2 0.013657 64.73 By matching By MS/MS 1 1 1793000 1045400 747560 0 2684 278 2847 8408;8409 5886 5886 367 1 SLSGSPLKVK WCHVHLKKSLSGSPLK SGSPLKVKNSKNSKSP K S L V K N 0 0 0 0 0 0 0 1 0 0 2 2 0 0 1 3 0 0 0 1 0 0 10 1 1014.6073 Q9UIG0 Q9UIG0 345 354 BAZ1B Tyrosine-protein kinase BAZ1B yes yes 2 0.0010749 107.09 By matching By MS/MS By matching 1 1 1 5557800 2127500 1395800 2034500 2685 1907 2848 8410;8411;8412 5887 5887 2691 1 SLSIEIGHEVK RSKVTAIKSLSIEIGH IEIGHEVKTQNKLLAE K S L V K T 0 0 0 0 0 0 2 1 1 2 1 1 0 0 0 2 0 0 0 1 0 0 11 0 1210.6558 C9JTT8;Q68DU7;H7C1N3;O15155 C9JTT8 48 58 BET1;DKFZp781C0425 BET1 homolog yes no 2 3.579E-10 138.2 By MS/MS By MS/MS By matching 1 1 1 45109000 18192000 12840000 14078000 2686 447 2849 8413;8414;8415 5888;5889 5888 590 2 SLSIEIGHEVKTQNK RSKVTAIKSLSIEIGH HEVKTQNKLLAEMVSG K S L N K L 0 0 1 0 0 1 2 1 1 2 1 2 0 0 0 2 1 0 0 1 0 0 15 1 1681.8999 C9JTT8;Q68DU7;H7C1N3;O15155 C9JTT8 48 62 BET1;DKFZp781C0425 BET1 homolog yes no 3 0.0030081 60.196 By MS/MS By matching By matching 1 1 1 1945600 686020 464050 795480 2687 447 2850 8416;8417;8418 5890 5890 590 1 SLSLEATSPLSAEK SEILSQPKSLSLEATS TSPLSAEKHSCTVPEG K S L E K H 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 4 1 0 0 0 0 0 14 0 1431.7457 H3BN63;Q86YC2 H3BN63 85 98 PALB2 Partner and localizer of BRCA2 yes no 2 0.012343 50.102 By MS/MS By matching By matching 1 1 1 1213600 451810 346770 415040 2688 819 2851 8419;8420;8421 5891 5891 1103 1 SLSPGGAALGYR PGGGGGQRSLSPGGAA GGAALGYRDYRLQQLA R S L Y R D 2 1 0 0 0 0 0 3 0 0 2 0 0 0 1 2 0 0 1 0 0 0 12 0 1147.5986 A0A087WWP4;Q96T37 A0A087WWP4 248 259 RBM15 Putative RNA-binding protein 15 yes no 2 0.0005409 87.641 By MS/MS By MS/MS By MS/MS 1 1 1 67939000 21974000 26580000 19384000 2689 65 2852 8422;8423;8424 5892;5893;5894 5893 83;84 3 SLSPILPGR ESTSRNRRSLSPILPG LSPILPGRHSPAPPPD R S L G R H 0 1 0 0 0 0 0 1 0 1 2 0 0 0 2 2 0 0 0 0 0 0 9 0 938.55492 M0QZS0;A0A087WZG4;Q6ZSZ5 M0QZS0 740 748 ARHGEF18 Rho guanine nucleotide exchange factor 18 yes no 2 0.0084601 70.399 By MS/MS 1 621960 621960 0 0 2690 85 2853 8425 5895 5895 102 1 SLSPSHLTEDR VVRPQESRSLSPSHLT PSHLTEDRQGRWKEED R S L D R Q 0 1 0 1 0 0 1 0 1 0 2 0 0 0 1 3 1 0 0 0 0 0 11 0 1240.6048 Q5T200 Q5T200 875 885 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 2 0.0026632 74.533 By matching By matching By MS/MS 1 1 1 22588000 7509100 8711000 6367600 2691 1501 2854 8426;8427;8428 5896 5896 2030 1 SLSQGSTNSNMLDVQGGAHK PAMMFRQRSLSQGSTN DVQGGAHKKRARRSSL R S L H K K 1 0 2 1 0 2 0 3 1 0 2 1 1 0 0 4 1 0 0 1 0 0 20 0 2029.9487 B7Z7Y1;E9PCH4;Q8TEU7 B7Z7Y1 1068 1087 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 3 0.0090691 43.38 By MS/MS By matching By MS/MS 1 1 1 2368300 928360 722840 717080 2692 375 2855 8429;8430;8431 5897;5898 5898 501 2 SLSSGSNFCSEQK SLVKKKERSLSSGSNF SNFCSEQKTSGIINKF R S L Q K T 0 0 1 0 1 1 1 1 0 0 1 1 0 1 0 5 0 0 0 0 0 0 13 0 1429.6144 O95243 O95243 316 328 MBD4 Methyl-CpG-binding domain protein 4 yes yes 2 0.0053778 66.215 By MS/MS By MS/MS 1 1 1487100 805020 682070 0 2693 1063 2856 8432;8433 5899;5900 5899 1426 2 SLSSPTVTLSAPLEGAK EPQIRRPRSLSSPTVT SAPLEGAKDSPVRRAV R S L A K D 2 0 0 0 0 0 1 1 0 0 3 1 0 0 2 4 2 0 0 1 0 0 17 0 1656.8934 A0A1B0GVY1;Q96PU5 A0A1B0GVY1 725 741 NEDD4L E3 ubiquitin-protein ligase NEDD4-like yes no 2 0.0098795 48.423 By MS/MS By MS/MS By matching 1 1 1 9113800 3658500 2656100 2799200 2694 284 2857 8434;8435;8436 5901;5902 5901 376 2 SLSSSLDDTEVK TETPIVSKSLSSSLDD SLDDTEVKKVMEECKR K S L V K K 0 0 0 2 0 0 1 0 0 0 2 1 0 0 0 4 1 0 0 1 0 0 12 0 1279.6143 O95292 O95292 156 167 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 0.0024009 75.088 By matching By matching By MS/MS 1 1 1 9615400 2980400 3805700 2829300 2695 1065 2858 8437;8438;8439 5903 5903 1429;1430 1 SLSSSLDDTEVKK TETPIVSKSLSSSLDD LDDTEVKKVMEECKRL K S L K K V 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 4 1 0 0 1 0 0 13 1 1407.7093 O95292 O95292 156 168 VAPB Vesicle-associated membrane protein-associated protein B/C yes yes 2 4.3115E-12 117.86 By matching By MS/MS By MS/MS 1 2 2 8853700 666350 4328400 3858900 2696 1065 2859 8440;8441;8442;8443;8444 5904;5905 5905 1429;1430 2 SLSVPDSGR NLLPTMSRSLSVPDSG LSVPDSGRLWDVHTSA R S L G R L 0 1 0 1 0 0 0 1 0 0 1 0 0 0 1 3 0 0 0 1 0 0 9 0 916.46141 O75420 O75420 636 644 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 2 0.017796 60.49 By MS/MS By matching By matching 1 1 1 4215800 1344800 1614200 1256900 2697 1033 2860 8445;8446;8447 5906 5906 1383 1 SLSVPVDLSR PPSKRHCRSLSVPVDL SVPVDLSRWQPVWRPA R S L S R W 0 1 0 1 0 0 0 0 0 0 2 0 0 0 1 3 0 0 0 2 0 0 10 0 1071.5924 Q9NYF3;D6RHW3 Q9NYF3 120 129 FAM53C Protein FAM53C yes no 2 0.0044475 71.153 By MS/MS By matching By MS/MS 1 1 1 5528700 2109100 1914500 1505100 2698 1878 2861 8448;8449;8450 5907;5908 5907 2650 2 SLSWNMTFQK TSILYFRRSLSWNMTF SWNMTFQKNSSLRQET R S L Q K N 0 0 1 0 0 1 0 0 0 0 1 1 1 1 0 2 1 1 0 0 0 0 10 0 1240.591 H3BPR5 H3BPR5 16 25 PDPK1 yes yes 2 0.012997 50.452 By MS/MS 1 350350 0 0 350350 2699 830 2862 8451 5909 5909 1117 0 SLSYEEPR PIRQGVVRSLSYEEPR SLSYEEPRRHSPPIEK R S L P R R 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 2 0 0 1 0 0 0 8 0 979.46108 F5GZK9;Q8IZD4 F5GZK9 147 154 DCP1B mRNA-decapping enzyme 1B yes no 2 0.010438 96.342 By MS/MS By matching By matching 1 1 1 9494200 3109400 3386900 2997900 2700 641 2863 8452;8453;8454 5910;5911 5910 864 2 SLSYSPVER IDSLRDSRSLSYSPVE LSYSPVERRRPSPQPS R S L E R R 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 1 1 0 0 9 0 1036.5189 Q9UQ35;I3L4U6 Q9UQ35 2690 2698 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0067336 79.659 By MS/MS 1 1740000 0 0 1740000 2701 1945 2864 8455 5912 5912 2769 1 SLTNSHLEK ISDRESRRSLTNSHLE LTNSHLEKKKCDEYIP R S L E K K 0 0 1 0 0 0 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 0 9 0 1027.5298 F8VX12;F8VX04;Q9H2H9 F8VX12 52 60 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 2 0.001503 132.32 By MS/MS By matching By MS/MS 2 1 2 19888000 10258000 2631100 6998700 2702 680 2865;2866 8456;8457;8458;8459;8460 5913;5914;5915;5916;5917 5914 908;909;3130 5 SLYASSPGGVYATR ALRPSTSRSLYASSPG PGGVYATRSSAVRLRS R S L T R S 2 1 0 0 0 0 0 2 0 0 1 0 0 0 1 3 1 0 2 1 0 0 14 0 1427.7045 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;A0A1B0GVG8 P08670 51 64 VIM Vimentin yes no 2 5.6115E-05 87.363 By MS/MS By MS/MS By MS/MS 4 4 4 58317000 22185000 15897000 20236000 2703 1129 2867;2868 8461;8462;8463;8464;8465;8466;8467;8468;8469;8470;8471;8472 5918;5919;5920;5921;5922;5923;5924;5925;5926 5925 1477;1478;3282;3763;3764 9 SLYDEVAAQGEVVR SASILESKSLYDEVAA AAQGEVVRKLKAEKSP K S L V R K 2 1 0 1 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 3 0 0 14 0 1534.7627 V9GYZ6;P07814 V9GYZ6 832 845 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 2 0.017071 48.568 By MS/MS By matching By matching 1 1 1 3028300 1113900 962860 951590 2704 1121 2869 8473;8474;8475 5927 5927 3760 1 SLYEDLEDHPNVQK YRRLDIVRSLYEDLED EDHPNVQKDLERLTQE R S L Q K D 0 0 1 2 0 1 2 0 1 0 2 1 0 0 1 1 0 0 1 1 0 0 14 0 1685.7897 P40337 P40337 183 196 VHL Von Hippel-Lindau disease tumor suppressor yes yes 2 0.013525 53.124 By MS/MS 1 0 0 0 0 2705 1231 2870 8476 5928 5928 3783 1 SLYESFVSSSDR SSRRPQRKSLYESFVS SFVSSSDRLRELGPDG K S L D R L 0 1 0 1 0 0 1 0 0 0 1 0 0 1 0 5 0 0 1 1 0 0 12 0 1375.6256 P18615;A0A0A0MT02;A2ABK4 P18615 131 142 NELFE Negative elongation factor E yes no 2 0.0080609 60.157 By matching By MS/MS By matching 1 1 1 1641100 481360 712930 446800 2706 1171 2871 8477;8478;8479 5929 5929 1521 1 SLYSAISLFNNPVK PTVPKMKKSLYSAISL SLFNNPVKYWEMQPAT K S L V K Y 1 0 2 0 0 0 0 0 0 1 2 1 0 1 1 3 0 0 1 1 0 0 14 0 1551.8297 Q9BXN1 Q9BXN1 342 355 ASPN Asporin yes yes 2 0.0035381 70.412 By MS/MS By matching 1 1 2335500 1413500 922050 0 2707 1794 2872 8480;8481 5930 5930 1 SMDLGIADETK FVKTRKSKSMDLGIAD LGIADETKLNTVDDQK K S M T K L 1 0 0 2 0 0 1 1 0 1 1 1 1 0 0 1 1 0 0 0 0 0 11 0 1178.5489 Q5VWV2;Q8TEW0 Q5VWV2 792 802 PARD3 Partitioning defective 3 homolog yes no 2 0.01058 57.225 By MS/MS 1 280040 0 280040 0 2708 1522 2873 8482 5931 5931 2067 1 SMGTGDTPGLEVPSSPLR TRTRPVTRSMGTGDTP EVPSSPLRKAKRARLC R S M L R K 0 1 0 1 0 0 1 3 0 0 2 0 1 0 3 3 2 0 0 1 0 0 18 0 1799.8724 C9J0I9;Q86WB0 C9J0I9 338 355 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.0043622 74.12 By matching By MS/MS By MS/MS 1 2 1 14451000 5013500 5865000 3572200 2709 401 2874;2875 8483;8484;8485;8486 5932;5933 5933 31 536;537 2 SMGTGDTPGLEVPSSPLRK TRTRPVTRSMGTGDTP VPSSPLRKAKRARLCS R S M R K A 0 1 0 1 0 0 1 3 0 0 2 1 1 0 3 3 2 0 0 1 0 0 19 1 1927.9673 C9J0I9;Q86WB0 C9J0I9 338 356 ZC3HC1 Nuclear-interacting partner of ALK yes no 2;3 2.3911E-24 106.35 By MS/MS By MS/MS By MS/MS 4 4 3 37218000 15428000 12214000 9575400 2710 401 2876;2877 8487;8488;8489;8490;8491;8492;8493;8494;8495;8496;8497 5934;5935;5936;5937;5938;5939;5940 5937 31 536;537 7 SMSFQGIR LLLSVQKRSMSFQGIR SMSFQGIRQPVTVTEL R S M I R Q 0 1 0 0 0 1 0 1 0 1 0 0 1 1 0 2 0 0 0 0 0 0 8 0 924.44874 P15924 P15924 2207 2214 DSP Desmoplakin yes yes 2 0.012106 79.489 By matching By matching By MS/MS 1 1 1 2683400 773770 1114000 795660 2711 1161 2878 8498;8499;8500 5941 5941 1507 1 SNAKANSHYLYR FHQAAKEKSNAKANSH ANSHYLYRHKYENYRM K S N Y R H 2 1 2 0 0 0 0 0 1 0 1 1 0 0 0 2 0 0 2 0 0 0 12 1 1422.7004 A0A087WZL9;Q9H582 A0A087WZL9 302 313 ZNF644 Zinc finger protein 644 yes no 2 0.0075525 59.245 By matching By MS/MS 1 1 7911900 0 626700 7285200 2712 86 2879 8501;8502 5942 5942 7 103;104 1 SNDSGEEAEKEFIFV KDGHQGSKSNDSGEEA AEKEFIFV________ K S N F V - 1 0 1 1 0 0 4 1 0 1 0 1 0 2 0 2 0 0 0 1 0 0 15 1 1699.7577 Q5VZK9 Q5VZK9 1357 1371 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 2 0.0086861 56.339 By MS/MS By matching 1 1 5216400 0 2912500 2304000 2713 1524 2880 8503;8504 5943 5943 2069 1 SNESVDIQDQEEK RSGKWKNKSNESVDIQ DIQDQEEKVVKQECIK K S N E K V 0 0 1 2 0 2 3 0 0 1 0 1 0 0 0 2 0 0 0 1 0 0 13 0 1519.6638 Q5UIP0 Q5UIP0 1576 1588 RIF1 Telomere-associated protein RIF1 yes yes 2 0.0038833 69.716 By MS/MS By MS/MS By matching 1 1 1 8293000 2409100 3355700 2528300 2714 1516 2881 8505;8506;8507 5944;5945 5945 2047;2048 2 SNKMRNMAK DKFLDQERSNKMRNMA NKMRNMAKDKERNQEK R S N A K D 1 1 2 0 0 0 0 0 0 0 0 2 2 0 0 1 0 0 0 0 0 0 9 2 1078.5376 A0A024QZ33;Q9H0G5 A0A024QZ33 418 426 CCDC55;NSRP1 Nuclear speckle splicing regulatory protein 1 yes no 3 0.0071612 57.859 By MS/MS 1 0 0 0 0 2715 0 2882 8508 5946 5946 0 0 1 SNMSPHGLPAR GERPGPNRSNMSPHGL SPHGLPARSSGSPKFA R S N A R S 1 1 1 0 0 0 0 1 1 0 1 0 1 0 2 2 0 0 0 0 0 0 11 0 1165.5662 H0Y4T7;E7ESY4;Q13330 H0Y4T7 238 248 MTA1 Metastasis-associated protein MTA1 yes no 2 0.0044184 91.202 By matching By matching By MS/MS 1 1 1 5973200 1556200 1934000 2483000 2716 541 2883 8509;8510;8511 5947 5947 697 0 SNPSIQATLNK SSGLQSSRSNPSIQAT SIQATLNKTVLSSSLN R S N N K T 1 0 2 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 11 0 1171.6197 Q6UUV7 Q6UUV7 329 339 CRTC3 CREB-regulated transcription coactivator 3 yes yes 2 0.0024008 82.85 By matching By matching By MS/MS 1 1 1 4321400 1385300 1665100 1271000 2717 1559 2884 8512;8513;8514 5948;5949 5949 2119 2 SNQIPTEVR KEQLKIRKSNQIPTEV NQIPTEVRSKAEEVVS K S N V R S 0 1 1 0 0 1 1 0 0 1 0 0 0 0 1 1 1 0 0 1 0 0 9 0 1042.5407 Q9BWH2 Q9BWH2 151 159 FUNDC2 FUN14 domain-containing protein 2 yes yes 2 0.0079796 71.03 By matching By MS/MS By matching 1 1 1 23719000 7555300 8956900 7206700 2718 1790 2885 8515;8516;8517 5950 5950 2484 1 SNRQKEYK ________________ SNRQKEYKCGDLVFAK R S N Y K C 0 1 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 1 0 0 0 8 2 1051.5411 P51858 P51858 4 11 HDGF Hepatoma-derived growth factor yes yes 2 0.018067 44.349 By MS/MS 1 0 0 0 0 2719 1279 2886 8518 5951 5951 1688 1 SNSDESNFSEKLR GATNNLSRSNSDESNF SNFSEKLRASTVMYHP R S N L R A 0 1 2 1 0 0 2 0 0 0 1 1 0 1 0 4 0 0 0 0 0 0 13 1 1511.6852 A0A087WWW9;O95999 A0A087WWW9 125 137 BCL10 B-cell lymphoma/leukemia 10 yes no 2 0.0047686 72.2 By MS/MS 1 1408500 0 0 1408500 2720 68 2887 8519 5952 5952 87 1 SNSEDSSVGKGDWK ERKNPLHKSNSEDSSV SVGKGDWKKKNKYFWQ K S N W K K 0 0 1 2 0 0 1 2 0 0 0 2 0 0 0 4 0 1 0 1 0 0 14 1 1494.6587 O94885 O94885 135 148 SASH1 SAM and SH3 domain-containing protein 1 yes yes 2 0.0036947 70.272 By MS/MS By MS/MS By MS/MS 1 1 1 2222300 1132400 655740 434180 2721 1055 2888 8520;8521;8522 5953;5954;5955;5956 5954 1418 4 SNSFNNPLGNR WQPNIPVRSNSFNNPL FNNPLGNRASHSANSQ R S N N R A 0 1 4 0 0 0 0 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 11 0 1218.5741 O95835 O95835 462 472 LATS1 Serine/threonine-protein kinase LATS1 yes yes 2 0.005798 67.879 By MS/MS By matching By MS/MS 1 1 1 9368200 3134700 3170200 3063300 2722 1075 2889 8523;8524;8525 5957;5958 5958 1447 2 SNSLPHSAVSNAGSK SVPPPLPRSNSLPHSA AVSNAGSKSSVMDGAI R S N S K S 2 0 2 0 0 0 0 1 1 0 1 1 0 0 1 5 0 0 0 1 0 0 15 0 1454.7114 A0A088AWN2;Q8TBZ3 A0A088AWN2 463 477 WDR20 WD repeat-containing protein 20 yes no 2 5.7762E-07 93.427 By MS/MS By MS/MS By MS/MS 1 1 1 11986000 5257800 3553000 3174700 2723 118 2890 8526;8527;8528 5959;5960;5961 5959 156 3 SNSLSEQLAINTSPDAVK GEPALRTKSNSLSEQL NTSPDAVKAKLISRMA K S N V K A 2 0 2 1 0 1 1 0 0 1 2 1 0 0 1 4 1 0 0 1 0 0 18 0 1872.9429 A0A0A0MT60;Q5T1M5;X6RKW4 A0A0A0MT60 369 386 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 1.3429E-23 114.99 By MS/MS By MS/MS By MS/MS 1 1 1 7486100 3101100 1782500 2602500 2724 163 2891 8529;8530;8531 5962;5963;5964;5965;5966 5966 217;218 5 SNSPLPVPPSK SRSRSQSRSNSPLPVP PLPVPPSKARSVSPPP R S N S K A 0 0 1 0 0 0 0 0 0 0 1 1 0 0 4 3 0 0 0 1 0 0 11 0 1121.6081 Q13247 Q13247 301 311 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 2 0.0022727 80.371 By MS/MS By MS/MS By MS/MS 3 1 1 4245600 2667500 648010 930020 2725 1384 2892 8532;8533;8534;8535;8536 5967;5968;5969;5970;5971;5972 5970 1835 6 SNSSEALLVDR LFVARTRRSNSSEALL SEALLVDRAAGGGAGS R S N D R A 1 1 1 1 0 0 1 0 0 0 2 0 0 0 0 3 0 0 0 1 0 0 11 0 1189.5939 Q96HB5 Q96HB5 358 368 CCDC120 Coiled-coil domain-containing protein 120 yes yes 2 0.0098807 58.274 By MS/MS By matching By matching 2 1 2 2128600 978260 550380 599970 2726 1739 2893 8537;8538;8539;8540;8541 5973;5974 5973 2389;2390 2 SNSSSEAVLGQEELSAQAK DTWPRGSRSNSSSEAV EELSAQAKVLAPGASH R S N A K V 3 0 1 0 0 2 3 1 0 0 2 1 0 0 0 5 0 0 0 1 0 0 19 0 1933.9229 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 393 411 RAB11FIP5 Rab11 family-interacting protein 5 yes no 2 0.0048446 56.9 By matching By MS/MS By matching 1 1 1 6335700 1976300 2137200 2222200 2727 269 2894 8542;8543;8544 5975 5975 353 1 SNSVGIQDAFNDGSDSTFQK PPLPGMSRSNSVGIQD GSDSTFQKRNSMTPNP R S N Q K R 1 0 2 3 0 2 0 2 0 1 0 1 0 2 0 4 1 0 0 1 0 0 20 0 2115.9345 O14497;A0A087WUV6;H0Y488;A0A1B0GTU5 O14497 1182 1201 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 0.018688 43.164 By MS/MS By matching By matching 1 1 1 2497800 971730 777840 748230 2728 979 2895 8545;8546;8547 5976 5976 1299 1 SNSVSLVPPGSSHTLPR SNHLSLSKSNSVSLVP GSSHTLPRRAQSLKAP K S N P R R 0 1 1 0 0 0 0 1 1 0 2 0 0 0 3 5 1 0 0 2 0 0 17 0 1733.906 Q6R327 Q6R327 1282 1298 RICTOR Rapamycin-insensitive companion of mTOR yes yes 3 0.0080024 44.735 By MS/MS By matching By matching 1 1 1 1548200 711170 466900 370080 2729 1556 2896 8548;8549;8550 5977 5977 2113 1 SNSWQGNLGGNK ICENGRPRSNSWQGNL QGNLGGNKKKIRGKRF R S N N K K 0 0 3 0 0 1 0 3 0 0 1 1 0 0 0 2 0 1 0 0 0 0 12 0 1260.5847 H7C3I4;H7C0Q9;Q9P0K1 H7C3I4 161 172 ADAM22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 2 0.00033375 89.959 By matching By MS/MS By MS/MS 1 1 1 2439000 681030 994800 763210 2730 862 2897 8551;8552;8553 5978;5979 5978 1160 2 SNSWVNTGGPK IGSKGLDRSNSWVNTG WVNTGGPKAAPWGSNP R S N P K A 0 0 2 0 0 0 0 2 0 0 0 1 0 0 1 2 1 1 0 1 0 0 11 0 1145.5465 Q96N67;A0A0U1RRC1;A0A1B0GWE0 Q96N67 927 937 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 5.5902E-05 109 By MS/MS By MS/MS By MS/MS 1 1 1 9934700 3584000 3293400 3057300 2731 1750 2898 8554;8555;8556 5980;5981;5982 5981 2417 3 SNTEPQSPPIASPK DTSTWGLKSNTEPQSP SPPIASPKAITKPVRR K S N P K A 1 0 1 0 0 1 1 0 0 1 0 1 0 0 4 3 1 0 0 0 0 0 14 0 1451.7256 F8WF45;P82094 F8WF45 66 79 TMF1 TATA element modulatory factor yes no 2 0.002583 68.786 By MS/MS By MS/MS By matching 1 3 2 3874400 897260 2097000 880140 2732 703 2899 8557;8558;8559;8560;8561;8562 5983;5984;5985 5985 942;943 3 SNTPILVDGK LHVALRNRSNTPILVD TPILVDGKDVMPEVNK R S N G K D 0 0 1 1 0 0 0 1 0 1 1 1 0 0 1 1 1 0 0 1 0 0 10 0 1042.5659 K7EP41;K7EPY4;A0A0J9YXP8;A0A0J9YX90;A0A0J9YYH3;K7EQ48;A0A0A0MTS2;P06744 K7EP41 107 116 GPI Glucose-6-phosphate isomerase yes no 2 0.015453 78.324 By matching By matching By MS/MS 1 1 1 1856600 654950 553360 648330 2733 170 2900 8563;8564;8565 5986 5986 2926 1 SNVSDAVAQSTR EKLRGWLKSNVSDAVA DAVAQSTRIIYGGSVT K S N T R I 2 1 1 1 0 1 0 0 0 0 0 0 0 0 0 3 1 0 0 2 0 0 12 0 1233.5949 P60174 P60174 232 243 TPI1 Triosephosphate isomerase yes yes 2 0.0051509 72.434 By MS/MS By matching By matching 1 1 1 2322600 743350 1205400 373920 2734 1303 2901 8566;8567;8568 5987 5987 1 SPALKSPLQSVVVR SELSPRERSPALKSPL PLQSVVVRRRSPRPSP R S P V R R 1 1 0 0 0 1 0 0 0 0 2 1 0 0 2 3 0 0 0 3 0 0 14 1 1479.8773 Q9Y2W1 Q9Y2W1 248 261 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.010522 58.32 By MS/MS 1 2110300 2110300 0 0 2735 1960 2902 8569 5988 5988 2796;2797;2798 1 SPAPGAPTRSPSTPAK ANGTPTTKSPAPGAPT RSPSTPAKSPKLQKKN K S P A K S 3 1 0 0 0 0 0 1 0 0 0 1 0 0 5 3 2 0 0 0 0 0 16 1 1520.7947 I3L1L3;Q9BQG0 I3L1L3 1152 1167 MYBBP1A Myb-binding protein 1A yes no 2 0.0098783 59.198 By MS/MS By matching By matching 1 1 1 2788800 1134700 1043900 610180 2736 885 2903 8570;8571;8572 5989 5989 1191;3201 1 SPARTPPSEEDSAEAER KEMPQDLRSPARTPPS EDSAEAERLKTEGNEQ R S P E R L 3 2 0 1 0 0 4 0 0 0 0 0 0 0 3 3 1 0 0 0 0 0 17 1 1827.8235 O43765;K7EMD6 O43765 77 93 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 3 4.1412E-05 83.792 By MS/MS By matching By matching 1 1 1 2435600 1075900 748470 611150 2737 1016 2904 8573;8574;8575 5990 5990 3244 1 SPAVATSTAAPPPPSSPLPSK MEVFLQEKSPAVATST PSSPLPSKSTSAPQMS K S P S K S 4 0 0 0 0 0 0 0 0 0 1 1 0 0 7 5 2 0 0 1 0 0 21 0 1959.0313 Q14157;F8W726 Q14157 439 459 UBAP2L Ubiquitin-associated protein 2-like yes no 2;3 5.7326E-18 98.882 By MS/MS By MS/MS By MS/MS 2 2 2 120120000 47686000 39068000 33365000 2738 1405 2905 8576;8577;8578;8579;8580;8581 5991;5992;5993;5994;5995;5996;5997;5998 5992 1865;1866 8 SPAYSVSTIEPR RRESHHLRSPAYSVST SVSTIEPREDLLSPVQ R S P P R E 1 1 0 0 0 0 1 0 0 1 0 0 0 0 2 3 1 0 1 1 0 0 12 0 1305.6565 O94991 O94991 830 841 SLITRK5 SLIT and NTRK-like protein 5 yes yes 2 0.0010748 85.288 By MS/MS By matching By matching 1 1 1 3394600 1088300 1250700 1055600 2739 1058 2906 8582;8583;8584 5999 5999 3757 1 SPDKPGGSPSASR REAREAARSPDKPGGS GGSPSASRRKGRASEH R S P S R R 1 1 0 1 0 0 0 2 0 0 0 1 0 0 3 4 0 0 0 0 0 0 13 1 1241.6 Q9Y3T9 Q9Y3T9 49 61 NOC2L Nucleolar complex protein 2 homolog yes yes 2 2.6938E-07 106.62 By MS/MS By MS/MS By MS/MS 2 1 2 8281300 2591800 2902300 2787200 2740 1966 2907 8585;8586;8587;8588;8589 6000;6001;6002 6001 2813;2814;2815 3 SPESVPVDSNK LGKECKIKSPESVPVD SVPVDSNKDCTTPLEM K S P N K D 0 0 1 1 0 0 1 0 0 0 0 1 0 0 2 3 0 0 0 2 0 0 11 0 1157.5564 A0A075B754;Q96QE3 A0A075B754 86 96 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.018711 48.796 By MS/MS 1 882820 882820 0 0 2741 12 2908 8590 6003 6003 10;11 0 SPGAPGPLTLK AQNQNQVRSPGAPGPL APGPLTLKEVEELEQL R S P L K E 1 0 0 0 0 0 0 2 0 0 2 1 0 0 3 1 1 0 0 0 0 0 11 0 1036.5917 H0Y2Y8;Q15942;C9JJK5 H0Y2Y8 312 322 ZYX Zyxin yes no 2 0.007783 61.419 By matching By MS/MS 1 1 8998900 4144900 4854000 0 2742 744 2909 8591;8592 6004 6004 1019 1 SPGASNFSTLPK PRGPSTPKSPGASNFS SNFSTLPKISPSSLSN K S P P K I 1 0 1 0 0 0 0 1 0 0 1 1 0 1 2 3 1 0 0 0 0 0 12 0 1204.6088 Q9Y4E8 Q9Y4E8 229 240 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 2 0.016176 51.875 By MS/MS By matching By matching 1 1 1 3767100 1153300 1690500 923290 2743 1969 2910 8593;8594;8595 6005 6005 2817 1 SPGEPGGAAPER RDGPGLERSPGEPGGA PGGAAPEREVPAAARG R S P E R E 2 1 0 0 0 0 2 3 0 0 0 0 0 0 3 1 0 0 0 0 0 0 12 0 1123.5258 Q96EB6 Q96EB6 47 58 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes yes 2 0.011866 55.04 By MS/MS 1 501850 0 0 501850 2744 1731 2911 8596 6006 6006 2379 1 SPGLCSDSLEK GDSGSRRRSPGLCSDS LCSDSLEKSLRITVGN R S P E K S 0 0 0 1 1 0 1 1 0 0 2 1 0 0 1 3 0 0 0 0 0 0 11 0 1191.5442 Q5VUA4 Q5VUA4 136 146 ZNF318 Zinc finger protein 318 yes yes 2 0.0022892 80.69 By matching By MS/MS By matching 1 1 1 3203300 1244200 1023600 935460 2745 1520 2912 8597;8598;8599 6007 6007 2060 1 SPGNTSQPPAFFSK EPSRMGSKSPGNTSQP QPPAFFSKLTESNSAM K S P S K L 1 0 1 0 0 1 0 1 0 0 0 1 0 2 3 3 1 0 0 0 0 0 14 0 1463.7045 C9J7T7;C9JE98;C9J0Q5;C9JFD3;Q9Y618;H7C184 C9J7T7 1806 1819 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.0042149 63.185 By MS/MS 1 770540 770540 0 0 2746 402 2913 8600 6008 6008 542 1 SPGSPVGEGTGSPPK EKYKAKSRSPGSPVGE EGTGSPPKWQIGEQEF R S P P K W 0 0 0 0 0 0 1 4 0 0 0 1 0 0 4 3 1 0 0 1 0 0 15 0 1352.6572 E7EV99;E7ENY0;P35611;A0A0A0MSR2;H0Y9H2 E7EV99 355 369 ADD1 Alpha-adducin yes no 2 2.6978E-18 116.79 By MS/MS By MS/MS By MS/MS 1 1 1 16419000 5688900 5766200 4963600 2747 523 2914 8601;8602;8603 6009;6010;6011;6012 6011 668 4 SPGSTPTTPTSSQAPQK LEGERQPKSPGSTPTT TSSQAPQKLDASAAAA K S P Q K L 1 0 0 0 0 2 0 1 0 0 0 1 0 0 4 4 4 0 0 0 0 0 17 0 1670.8111 P35658 P35658 430 446 NUP214 Nuclear pore complex protein Nup214 yes yes 2 0.010418 56.339 By matching By matching By MS/MS 1 1 1 4560200 1330000 1944800 1285400 2748 1223 2915 8604;8605;8606 6013 6013 1581;3315 1 SPGVAAAVAEDGGLK MPVKKKRKSPGVAAAV VAEDGGLKKCKISRS_ K S P L K K 4 0 0 1 0 0 1 3 0 0 1 1 0 0 1 1 0 0 0 2 0 0 15 0 1340.6936 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 9 23 DCUN1D5 DCN1-like protein;DCN1-like protein 5 yes no 2 0.0036939 59.862 By MS/MS By matching 1 1 931280 441310 0 489970 2749 605 2916 8607;8608 6014 6014 812 1 SPGVAAAVAEDGGLKK MPVKKKRKSPGVAAAV AEDGGLKKCKISRS__ K S P K K C 4 0 0 1 0 0 1 3 0 0 1 2 0 0 1 1 0 0 0 2 0 0 16 1 1468.7886 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 9 24 DCUN1D5 DCN1-like protein;DCN1-like protein 5 yes no 2 2.4095E-07 91.789 By MS/MS By MS/MS By MS/MS 1 1 1 6616700 2630200 2035400 1951100 2750 605 2917 8609;8610;8611 6015;6016;6017 6017 812 2 SPLGEAPPGTPPCR QPCQLCGRSPLGEAPP PPGTPPCRLCCPATAP R S P C R L 1 1 0 0 1 0 1 2 0 0 1 0 0 0 5 1 1 0 0 0 0 0 14 0 1434.6925 M0QXZ5;Q96B54 M0QXZ5 132 145 ZNF428 Zinc finger protein 428 yes no 2 0.01511 66.285 By MS/MS By MS/MS By matching 2 2 1 3140900 1326300 1095300 719220 2751 959 2918 8612;8613;8614;8615;8616 6018;6019 6019 3228 2 SPNNSDKTFLSK ________________ SDKTFLSKFSSQEITL R S P S K F 0 0 2 1 0 0 0 0 0 0 1 2 0 1 1 3 1 0 0 0 0 0 12 1 1336.6623 H7C550 H7C550 7 18 FRMD4B yes yes 2 0.0067584 58.098 By matching By MS/MS By matching 1 1 1 1474700 427890 429130 617660 2752 877 2919 8617;8618;8619 6020 6020 47;48 1177;3196 0 SPPASPESWK SVSPSSWKSPPASPES PASPESWKSGPPELRK K S P W K S 1 0 0 0 0 0 1 0 0 0 0 1 0 0 3 3 0 1 0 0 0 0 10 0 1084.5189 Q96JM3 Q96JM3 382 391 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.012721 59.265 By matching By MS/MS By matching 1 1 1 2122600 784170 706660 631730 2753 1743 2920 8620;8621;8622 6021 6021 2408 1 SPPLLESPDATR SDSQQAVKSPPLLESP LESPDATRESMVKLSS K S P T R E 1 1 0 1 0 0 1 0 0 0 2 0 0 0 3 2 1 0 0 0 0 0 12 0 1281.6565 Q15036 Q15036 415 426 SNX17 Sorting nexin-17 yes yes 2 0.01037 56.139 By matching By matching By MS/MS 1 1 1 1518800 425990 636110 456640 2754 1429 2921 8623;8624;8625 6022 6022 1913 1 SPPLPAVIR VRRPQRPRSPPLPAVI PPLPAVIRNAPSRPPS R S P I R N 1 1 0 0 0 0 0 0 0 1 1 0 0 0 3 1 0 0 0 1 0 0 9 0 948.57565 Q9Y6X9 Q9Y6X9 615 623 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 0.0068318 72.607 By MS/MS By matching 1 1 8710700 5658700 0 3052000 2755 1981 2922 8626;8627 6023 6023 2833 1 SPPLSPVGTTPVK KSPSGPVKSPPLSPVG PVGTTPVKLKRAAPKE K S P V K L 0 0 0 0 0 0 0 1 0 0 1 1 0 0 4 2 2 0 0 2 0 0 13 0 1278.7184 C9J4K0;Q9BVC5 C9J4K0 147 159 C2orf49 Ashwin yes no 2 0.0022529 82.202 By MS/MS By MS/MS By MS/MS 1 2 1 3458200 1277700 1173900 1006700 2756 412 2923 8628;8629;8630;8631 6024;6025;6026;6027;6028;6029;6030;6031;6032 6031 549;3021 9 SPPPGMGLNQNR RGGLHDFRSPPPGMGL GMGLNQNRGPMGPGPG R S P N R G 0 1 2 0 0 1 0 2 0 0 1 0 1 0 3 1 0 0 0 0 0 0 12 0 1266.6139 P23246 P23246 33 44 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.0063893 65.563 By matching By MS/MS By MS/MS 1 1 1 6448600 2074200 2415000 1959500 2757 1190 2924 8632;8633;8634 6033;6034 6033 1538 2 SPPREGSQGELTPANSQSR ARVDSHSKSPPREGSQ TPANSQSRMSTNM___ K S P S R M 1 2 1 0 0 2 2 2 0 0 1 0 0 0 3 4 1 0 0 0 0 0 19 1 1996.9562 J3QQX0;C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098 J3QQX0 56 74 GPS1 COP9 signalosome complex subunit 1 yes no 3 0.0049348 54.626 By MS/MS By MS/MS By MS/MS 1 1 1 3404300 1349500 1212500 842340 2758 119 2925 8635;8636;8637 6035;6036;6037 6036 157 3 SPPSPVER LELQSHAKSPPSPVER SPPSPVEREMVVQVER K S P E R E 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 2 0 0 0 1 0 0 8 0 867.44503 Q02952 Q02952 1328 1335 AKAP12 A-kinase anchor protein 12 yes yes 2 0.012055 82.029 By MS/MS By MS/MS By MS/MS 1 1 1 7297400 2297700 2817200 2182500 2759 1336 2926 8638;8639;8640 6038;6039;6040;6041;6042 6038 1750 5 SPQETYDVYCYVDHLDGDVFHLTVPSK GVRTYGFRSPQETYDV FHLTVPSKFTFEEAAK R S P S K F 0 0 0 4 1 1 1 1 2 0 2 1 0 1 2 2 2 0 3 4 0 0 27 0 3183.4495 Q86W61;D6RGZ6;E9PF17;P13611 Q86W61 234 260 VCAN Versican core protein yes no 4 3.2222E-06 69.981 By MS/MS By MS/MS By MS/MS 1 1 1 13854000 6979000 2679400 4195600 2760 498 2927 8641;8642;8643 6043;6044;6045 6043 3 SPQQTVPYVVPLSPK TERQSTKRSPQQTVPY YVVPLSPKLPKTKEYA R S P P K L 0 0 0 0 0 2 0 0 0 0 1 1 0 0 4 2 1 0 1 3 0 0 15 0 1638.8981 H0Y6S1;Q9UQR0 H0Y6S1 15 29 SCML2 Sex comb on midleg-like protein 2 yes no 2 0.0011913 77.593 By MS/MS By matching By MS/MS 1 1 1 2400700 955350 783480 661900 2761 764 2928 8644;8645;8646 6046;6047 6046 1045;3709 2 SPQSPGGNICHLGAPK QQDSPKERSPQSPGGN ICHLGAPKCTRCLITF R S P P K C 1 0 1 0 1 1 0 3 1 1 1 1 0 0 3 2 0 0 0 0 0 0 16 0 1618.7886 Q9H609 Q9H609 20 35 ZNF576 Zinc finger protein 576 yes yes 2 0.013867 46.156 By matching By MS/MS By matching 1 1 1 1538800 368300 647840 522700 2762 1824 2929 8647;8648;8649 6048 6048 2556 1 SPSDLHISPLAK PGSSLEARSPSDLHIS LHISPLAKKLPPPPGS R S P A K K 1 0 0 1 0 0 0 0 1 1 2 1 0 0 2 3 0 0 0 0 0 0 12 0 1263.6823 B9EGQ5;M0QXA7;O95785 B9EGQ5 308 319 WIZ Protein Wiz yes no 2 0.0066752 64.224 By matching By MS/MS By matching 1 1 1 6882500 2505500 1899100 2477900 2763 391 2930 8650;8651;8652 6049 6049 521 1 SPSDSGYSYETIGK EKIERTTKSPSDSGYS YSYETIGKTTKTPEDG K S P G K T 0 0 0 1 0 0 1 2 0 1 0 1 0 0 1 4 1 0 2 0 0 0 14 0 1489.6573 P46821 P46821 1915 1928 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 3.0039E-11 110.66 By MS/MS By MS/MS By MS/MS 2 2 2 13872000 4536100 4698700 4637700 2764 1245 2931;2932 8653;8654;8655;8656;8657;8658 6050;6051;6052;6053 6052 1624;3319;3792;3793 4 SPSDSSTASTPVAEQIER APTPIPTRSPSDSSTA PVAEQIERALDEVTSS R S P E R A 2 1 0 1 0 1 2 0 0 1 0 0 0 0 2 5 2 0 0 1 0 0 18 0 1860.8701 Q16643;D6R9Q9 Q16643 337 354 DBN1 Drebrin yes no 2 0.0091311 49.483 By matching By MS/MS By matching 1 1 1 4384000 1440300 1414700 1529100 2765 1457 2933 8659;8660;8661 6054 6054 1954;1955 1 SPSFASEWDEIEK IGKKRLEKSPSFASEW SEWDEIEKIMSSIGEG K S P E K I 1 0 0 1 0 0 3 0 0 1 0 1 0 1 1 3 0 1 0 0 0 0 13 0 1523.678 Q92625 Q92625 661 673 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes yes 2 0.0002743 84.365 By MS/MS By MS/MS By MS/MS 1 1 1 2711000 1045700 750210 915060 2766 1702 2934 8662;8663;8664 6055;6056;6057 6055 2334 3 SPSFGGASEASAR GFEPQMVKSPSFGGAS GASEASARTPPQVVQP K S P A R T 3 1 0 0 0 0 1 2 0 0 0 0 0 1 1 4 0 0 0 0 0 0 13 0 1222.5578 H7C2F7;Q8WVT3 H7C2F7 15 27 TRAPPC12 Trafficking protein particle complex subunit 12 yes no 2 0.0064329 66.004 By matching By MS/MS By MS/MS 1 1 1 2673200 960170 1005300 707740 2767 867 2935 8665;8666;8667 6058;6059;6060 6059 1165 2 SPSGGAAGPLLTPSQSLDGSR PTLELASRSPSGGAAG SQSLDGSRRSGYITIG R S P S R R 2 1 0 1 0 1 0 4 0 0 3 0 0 0 3 5 1 0 0 0 0 0 21 0 1953.9756 Q96CX2 Q96CX2 185 205 KCTD12 BTB/POZ domain-containing protein KCTD12 yes yes 2 0.014787 44.238 By matching By matching By MS/MS 1 1 1 5695900 2120100 1566000 2009800 2768 1726 2936 8668;8669;8670 6061 6061 2368 1 SPSGHPHVR NQRGRSPRSPSGHPHV PSGHPHVRRPRSRSRD R S P V R R 0 1 0 0 0 0 0 1 2 0 0 0 0 0 2 2 0 0 0 1 0 0 9 0 972.48896 Q8WX93 Q8WX93 1104 1112 PALLD Palladin yes yes 3 0.0021576 82.417 By MS/MS By MS/MS 1 1 711080 231860 479220 0 2769 1686 2937 8671;8672 6062;6063 6062 2313 2 SPSGSAFGSQENLR TIASPPERSPSGSAFG FGSQENLRWRKDMTHW R S P L R W 1 1 1 0 0 1 1 2 0 0 1 0 0 1 1 4 0 0 0 0 0 0 14 0 1435.6692 Q96N67;A0A1B0GWE0 Q96N67 1430 1443 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 5.8603E-17 136.33 By MS/MS By MS/MS By MS/MS 2 2 3 31818000 9922600 11528000 10368000 2770 1750 2938;2939 8673;8674;8675;8676;8677;8678;8679 6064;6065;6066;6067;6068;6069 6065 2418;2419 6 SPSLNLLQNK PEILVVSRSPSLNLLQ SLNLLQNKSM______ R S P N K S 0 0 2 0 0 1 0 0 0 0 3 1 0 0 1 2 0 0 0 0 0 0 10 0 1112.619 O43353 O43353 529 538 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 yes yes 2 0.015238 73.26 By MS/MS 1 0 0 0 0 2771 1007 2940 8680 6070 6070 1340 1 SPSLSPSPPSPLEK SEKVSPSKSPSLSPSP SPPSPLEKTPLGERSV K S P E K T 0 0 0 0 0 0 1 0 0 0 2 1 0 0 5 5 0 0 0 0 0 0 14 0 1421.7402 P46821 P46821 1256 1269 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.4338E-105 176.43 By MS/MS By MS/MS By MS/MS 1 1 1 8396900 2978900 2698800 2719200 2772 1245 2941 8681;8682;8683 6071;6072;6073;6074;6075;6076;6077 6075 1625 7 SPSPAPPPR PPPTRRRRSPSPAPPP PSPAPPPRRRRTPTPP R S P P R R 1 1 0 0 0 0 0 0 0 0 0 0 0 0 5 2 0 0 0 0 0 0 9 0 904.47667 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 569 577 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.01535 63.426 By MS/MS By matching By MS/MS 1 1 1 2154900 1037400 1117500 0 2773 322 2942 8684;8685;8686 6078;6079 6079 446;447 2 SPSPGLFR FPTAGGFRSPSPGLFR SPSPGLFRASLVSSAS R S P F R A 0 1 0 0 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 0 0 8 0 859.4552 E7ESG2;Q9HAW4 E7ESG2 755 762 CLSPN Claspin yes no 2 0.012666 81.784 By MS/MS By matching 2 1 2041300 0 1451900 589310 2774 536 2943 8687;8688;8689 6080;6081 6081 694 2 SPSPPTQHTGQPPGQPSAPSQLSAPR LSPKPPTRSPSPPTQH PSQLSAPRRYSSSLSP R S P P R R 2 1 0 0 0 4 0 2 1 0 1 0 0 0 8 5 2 0 0 0 0 0 26 0 2606.2837 I3L460;Q68EM7 I3L460 42 67 ARHGAP17 Rho GTPase-activating protein 17 yes no 3 0.00015561 59.005 By matching By MS/MS By MS/MS 1 1 1 10302000 3137200 4190600 2974500 2775 892 2944 8690;8691;8692 6082;6083;6084 6084 1197;3206 3 SPSSCNDLYATVK SIQGDPQRSPSSCNDL NDLYATVKDFEKTPNS R S P V K D 1 0 1 1 1 0 0 0 0 0 1 1 0 0 1 3 1 0 1 1 0 0 13 0 1440.6555 Q9NWQ8 Q9NWQ8 351 363 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 0.00010064 92.611 By matching By MS/MS By matching 1 1 1 12032000 4181100 4093500 3757800 2776 1870 2945 8693;8694;8695 6085 6085 3919 1 SPSSEWLVR TPASQAPKSPSSEWLV PSSEWLVRTSAAEKAT K S P V R T 0 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 1 0 1 0 0 9 0 1059.5349 Q9NWQ4 Q9NWQ4 447 455 GPATCH2L G patch domain-containing protein 2-like yes yes 2 0.016785 61.962 By MS/MS By matching 1 1 315660 0 174130 141530 2777 1869 2946 8696;8697 6086 6086 2640 1 SPSSVTGNALWK TYVKENARSPSSVTGN VTGNALWKAMEKSSLT R S P W K A 1 0 1 0 0 0 0 1 0 0 1 1 0 0 1 3 1 1 0 1 0 0 12 0 1245.6354 Q9NYB0 Q9NYB0 154 165 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 2 0.014034 53.448 By MS/MS By matching 1 1 957350 520310 0 437040 2778 1877 2947 8698;8699 6087 6087 2645 1 SPSVPKSPTPK AMATSPQKSPSVPKSP VPKSPTPKSPPSRKKD K S P P K S 0 0 0 0 0 0 0 0 0 0 0 2 0 0 4 3 1 0 0 1 0 0 11 1 1123.6237 J3KNQ4;Q9NVD7 J3KNQ4 48 58 PARVA Alpha-parvin yes no 2 0.015478 60.08 By MS/MS By MS/MS By MS/MS 1 1 1 2465000 767480 1072900 624670 2779 899 2948 8700;8701;8702 6088;6089;6090 6089 1207 2 SPTAPSVFSPTGNR IPKQAPFRSPTAPSVF VFSPTGNRTPIPPSRT R S P N R T 1 1 1 0 0 0 0 1 0 0 0 0 0 1 3 3 2 0 0 1 0 0 14 0 1416.6997 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 229 242 NELFA Negative elongation factor A yes no 2 0.0032466 66.784 By matching By MS/MS By MS/MS 1 1 1 2587000 844820 1009100 733020 2780 183 2949 8703;8704;8705 6091;6092 6091 253;254 2 SPTKAPHLQLIEGK GDGRREVRSPTKAPHL HLQLIEGKKNSLRVEG R S P G K K 1 0 0 0 0 1 1 1 1 1 2 2 0 0 2 1 1 0 0 0 0 0 14 1 1517.8566 O43491;H0Y5B0;E9PK52;E9PHY5;E9PII3 O43491 598 611 EPB41L2 Band 4.1-like protein 2 yes no 3 0.0045489 59.585 By MS/MS By matching By matching 1 1 1 6823500 2234500 2433900 2155100 2781 1012 2950 8706;8707;8708 6093 6093 1351 1 SPTKSSLDYR ESQLSFRRSPTKSSLD TKSSLDYRRLPDAHSD R S P Y R R 0 1 0 1 0 0 0 0 0 0 1 1 0 0 1 3 1 0 1 0 0 0 10 1 1152.5775 Q96PK6 Q96PK6 627 636 RBM14 RNA-binding protein 14 yes yes 2 0.010742 66.326 By matching By matching By MS/MS 1 1 1 4532900 1528000 1202100 1802700 2782 1753 2951 8709;8710;8711 6094 6094 2423 1 SPTNSTDKKMR QTFYSNNRSPTNSTDK NSTDKKMRTG______ R S P M R T 0 1 1 1 0 0 0 0 0 0 0 2 1 0 1 2 2 0 0 0 0 0 11 2 1263.6241 F8VW98 F8VW98 174 184 AVPR1A Vasopressin V1a receptor yes yes 3 0.015342 41.283 By MS/MS 1 0 0 0 0 2783 677 2952 8712 6095 6095 904;905;3128 1 SPTSPLNMK FIQPSAQKSPTSPLNM PTSPLNMKLGRPRIKK K S P M K L 0 0 1 0 0 0 0 0 0 0 1 1 1 0 2 2 1 0 0 0 0 0 9 0 973.49027 A0A0A0MRP6;B7ZLQ5;P28370 A0A0A0MRP6 116 124 SMARCA1 Probable global transcription activator SNF2L1 yes no 2 0.0081349 94.409 By matching By matching By MS/MS 1 1 1 4171900 1215300 1504900 1451700 2784 140 2953 8713;8714;8715 6096;6097 6096 2916 2 SPVPKSPVEEK VEKPEKAKSPVPKSPV PKSPVEEKGKSPVPKS K S P E K G 0 0 0 0 0 0 2 0 0 0 0 2 0 0 3 2 0 0 0 2 0 0 11 1 1195.6449 P07197;E7ESP9 P07197 615 625 NEFM Neurofilament medium polypeptide yes no 2 0.0048297 74.237 By MS/MS By matching By MS/MS 1 1 1 6228400 1838800 2672000 1717700 2785 1116 2954 8716;8717;8718 6098;6099 6099 1462 2 SPVPSPGSSSPQLQVK PLLLVGDRSPVPSPGS SSPQLQVKSSCKENPF R S P V K S 0 0 0 0 0 2 0 1 0 0 1 1 0 0 4 5 0 0 0 2 0 0 16 0 1593.8362 Q8N3F8 Q8N3F8 612 627 MICALL1 MICAL-like protein 1 yes yes 2 4.2428E-06 88.338 By MS/MS By MS/MS By MS/MS 1 1 1 9502900 3361900 3505800 2635200 2786 1628 2955 8719;8720;8721 6100;6101;6102 6100 2231;2232 3 SPVSTRPLPSASQK APAAVGRRSPVSTRPL PLPSASQKAGENQEHR R S P Q K A 1 1 0 0 0 1 0 0 0 0 1 1 0 0 3 4 1 0 0 1 0 0 14 1 1453.7889 Q8ND56 Q8ND56 216 229 LSM14A Protein LSM14 homolog A yes yes 2;3 0.0089559 60.631 By MS/MS By MS/MS 2 1 59014000 50816000 0 8197900 2787 1651 2956 8722;8723;8724 6103;6104 6103 2260 2 SPVVSGDTSPR HGAEIVYKSPVVSGDT VSGDTSPRHLSNVSST K S P P R H 0 1 0 1 0 0 0 1 0 0 0 0 0 0 2 3 1 0 0 2 0 0 11 0 1100.5462 I3L170;A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636 I3L170 296 306 MAPT Microtubule-associated protein;Microtubule-associated protein tau yes no 2 0.0032426 92.856 By MS/MS By MS/MS 1 1 1456200 0 783350 672820 2788 227 2957 8725;8726 6105;6106 6105 313;2943 1 SPYEAENSGEELDQR MSNIASVKSPYEAENS SGEELDQRYSKAKPMC K S P Q R Y 1 1 1 1 0 1 4 1 0 0 1 0 0 0 1 2 0 0 1 0 0 0 15 0 1722.7333 R4GMT1;Q9NPC7 R4GMT1 20 34 MYNN Myoneurin yes no 2 0.0053177 55.66 By MS/MS By matching 1 1 1052800 525240 527530 0 2789 1844 2958 8727;8728 6107 6107 2589 1 SQAKPGTPGGTGGPAPQY LASVQHMKSQAKPGTP TGGPAPQY________ K S Q Q Y - 2 0 0 0 0 2 0 5 0 0 0 1 0 0 4 1 2 0 1 0 0 0 18 1 1669.806 Q96L35;P54760 Q96L35 918 935 EPHB4 Receptor protein-tyrosine kinase;Ephrin type-B receptor 4 yes no 2 0.0029825 59.796 By MS/MS By MS/MS By matching 1 1 1 4516500 1780100 1481900 1254500 2790 1295 2959 8729;8730;8731 6108;6109 6109 3814 2 SQAQQPQKEAALSS ESQKILQRSQAQQPQK QKEAALSS________ R S Q S S - 3 0 0 0 0 4 1 0 0 0 1 1 0 0 1 3 0 0 0 0 0 0 14 1 1471.7267 Q3MHD2 Q3MHD2 182 195 LSM12 Protein LSM12 homolog yes yes 2 0.015593 52.5 By MS/MS 1 0 0 0 0 2791 1466 2960 8732 6110 6110 1966 1 SQDADSPGSSGAPENLTFK DAKEKRSKSQDADSPG APENLTFKERQRLFSQ K S Q F K E 2 0 1 2 0 1 1 2 0 0 1 1 0 1 2 4 1 0 0 0 0 0 19 0 1906.8545 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948;H0Y8U8 A8MQ02 1731 1749 MLLT4 Afadin yes no 2 0.003865 58.864 By MS/MS By MS/MS By matching 1 1 1 3991000 1435700 1343200 1212100 2792 316 2961 8733;8734;8735 6111;6112 6111 420 2 SQDATFSPGSEQAEKSPGPIVSR SPRRMMTRSQDATFSP SPGPIVSRTRSWDSSS R S Q S R T 2 1 0 1 0 2 2 2 0 1 0 1 0 1 3 5 1 0 0 1 0 0 23 1 2374.1401 C9J0I9;Q86WB0 C9J0I9 286 308 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.0002007 73.341 By matching By MS/MS By MS/MS 1 2 2 92174000 26181000 38005000 27988000 2793 401 2962;2963 8736;8737;8738;8739;8740 6113;6114;6115;6116 6113 538;539;3019 4 SQDSYPGSPSLSPR SLSSRSPKSQDSYPGS GSPSLSPRHGPSSSHM K S Q P R H 0 1 0 1 0 1 0 1 0 0 1 0 0 0 3 5 0 0 1 0 0 0 14 0 1476.6845 A0A0D9SEU5;R4GMX8;Q6VN20 A0A0D9SEU5 358 371 RANBP10 Ran-binding protein 10 yes no 2 0.00062306 68.944 By MS/MS By matching By MS/MS 1 1 1 2463700 821180 869760 772760 2794 210 2964 8741;8742;8743 6117;6118 6117 293;294 1 SQDVAVSPQQQQCSK IPKRTDVKSQDVAVSP PQQQQCSKSYVDRHME K S Q S K S 1 0 0 1 1 5 0 0 0 0 0 1 0 0 1 3 0 0 0 2 0 0 15 0 1688.7788 H3BQ37;H3BPW9;Q96F86;H3BTD6 H3BQ37 125 139 EDC3 Enhancer of mRNA-decapping protein 3 yes no 2 2.0722E-24 137.32 By MS/MS By MS/MS By MS/MS 1 1 1 15416000 5122100 6679300 3614600 2795 831 2965 8744;8745;8746 6119;6120;6121 6121 1120 3 SQEADVQDWEFR PAQLGTQRSQEADVQD DVQDWEFRKRDSQGTY R S Q F R K 1 1 0 2 0 2 2 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 12 0 1508.6532 Q9C0C2 Q9C0C2 836 847 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 5.3963E-05 105.03 By MS/MS By MS/MS By MS/MS 1 1 1 11564000 4608600 3735400 3220000 2796 1804 2966 8747;8748;8749 6122;6123;6124 6122 2516 3 SQEDEISSPVNK ILKRGLKRSQEDEISS EISSPVNKVRRVSFAD R S Q N K V 0 0 1 1 0 1 2 0 0 1 0 1 0 0 1 3 0 0 0 1 0 0 12 0 1331.6205 Q5UIP0;H7C2B5 Q5UIP0 2189 2200 RIF1 Telomere-associated protein RIF1 yes no 2 0.0006356 82.261 By matching By MS/MS By matching 1 1 1 8009800 3100400 2801600 2107800 2797 1516 2967 8750;8751;8752 6125 6125 2050;2051 0 SQEDEISSPVNKVR ILKRGLKRSQEDEISS SSPVNKVRRVSFADPI R S Q V R R 0 1 1 1 0 1 2 0 0 1 0 1 0 0 1 3 0 0 0 2 0 0 14 1 1586.79 Q5UIP0;H7C2B5 Q5UIP0 2189 2202 RIF1 Telomere-associated protein RIF1 yes no 3 0.0031682 64.827 By matching By MS/MS 1 1 2165300 1025900 0 1139400 2798 1516 2968 8753;8754 6126 6126 2050;2051 1 SQEELREDKAYQLER IAIQRVTRSQEELRED DKAYQLERHRIEAAMD R S Q E R H 1 2 0 1 0 2 4 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 15 2 1892.9228 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1234 1248 MLLT4 Afadin yes no 3 0.0040601 55.335 By MS/MS By MS/MS By matching 1 1 1 5671900 2061900 1839200 1770900 2799 316 2969 8755;8756;8757 6127;6128 6128 3621 2 SQETGDLDVGGLQETDKIIEVEEEQEDPYLNDR VFQACCVKSQETGDLD EDPYLNDRCRGGGPCK K S Q D R C 0 1 1 5 0 3 7 3 0 2 3 1 0 0 1 1 2 0 1 2 0 0 33 1 3762.7232 B1AHL2;B1AHM7;H7C1M6;B1AHM9;P23142 P23142 185 217 FBLN1 Fibulin-1 no no 3 0.0058777 39.923 By matching By MS/MS 1 1 4637600 0 2318800 2318800 2800 325;1189 2970 8758;8759 6129 6129 1 SQIHDIVLVGGSTR LRDAKLDKSQIHDIVL VLVGGSTRIPKIQKLL K S Q T R I 0 1 0 1 0 1 0 2 1 2 1 0 0 0 0 2 1 0 0 2 0 0 14 0 1480.7998 E9PKE3;P11142;E9PN89;A8K7Q2;E9PNE6 E9PKE3 310 323 HSPA8 Heat shock cognate 71 kDa protein yes no 3 0.0018484 59.864 By MS/MS By MS/MS By matching 1 1 1 1291500 405090 491640 394760 2801 598 2971 8760;8761;8762 6130;6131 6131 2 SQQQPTPVTPK YSTRRVTRSQQQPTPV QPTPVTPKKYPLRQTR R S Q P K K 0 0 0 0 0 3 0 0 0 0 0 1 0 0 3 1 2 0 0 1 0 0 11 0 1209.6354 O95251 O95251 80 90 KAT7 Histone acetyltransferase KAT7 yes yes 2 0.005296 87.831 By MS/MS By matching By MS/MS 1 1 1 9627600 2698900 3925800 3002900 2802 1064 2972 8763;8764;8765 6132;6133 6133 3266 2 SQRPSLEEEPEEEPGEGGTR LTERAYYRSQRPSLEE EPGEGGTRFGARSRAH R S Q T R F 0 2 0 0 0 1 7 3 0 0 1 0 0 0 3 2 1 0 0 0 0 0 20 1 2211.988 Q9H7J1 Q9H7J1 29 48 PPP1R3E Protein phosphatase 1 regulatory subunit 3E yes yes 3 0.015533 43.241 By matching By MS/MS By matching 1 1 1 2445000 910110 931680 603240 2803 1829 2973 8766;8767;8768 6134 6134 2567 1 SQSESSDEVTELDLSHGKK RQRSRLLRSQSESSDE LDLSHGKKDAFVLEID R S Q K K D 0 0 0 2 0 1 3 1 1 0 2 2 0 0 0 5 1 0 0 1 0 0 19 1 2074.9655 Q86YS7 Q86YS7 657 675 C2CD5 C2 domain-containing protein 5 yes yes 3 0.0068262 46.403 By matching By MS/MS By MS/MS 1 1 1 6371000 2531800 2085100 1754100 2804 1605 2974 8769;8770;8771 6135;6136 6135 2197;2198;2199;2200 2 SQSFFAAAR ERRRPQSRSQSFFAAA QSFFAAARAAVSAFPT R S Q A R A 3 1 0 0 0 1 0 0 0 0 0 0 0 2 0 2 0 0 0 0 0 0 9 0 983.48248 O14654 O14654 1089 1097 IRS4 Insulin receptor substrate 4 yes yes 2 0.011548 66.595 By matching By MS/MS By matching 1 1 1 6417400 2165200 2268500 1983700 2805 982 2975 8772;8773;8774 6137 6137 1310 1 SQSFTHSPSGDPK EDTPRKKRSQSFTHSP HSPSGDPKADKRRGPT R S Q P K A 0 0 0 1 0 1 0 1 1 0 0 1 0 1 2 4 1 0 0 0 0 0 13 0 1373.6212 J3KQR7;Q9Y4F5 J3KQR7 420 432 CEP170B Centrosomal protein of 170 kDa protein B yes no 2 0.0043534 68.751 By MS/MS By matching 1 1 1484200 0 975970 508230 2806 910 2976 8775;8776 6138 6138 1222 1 SQSLPNSLDYTQTSDPGR KRTQRHGRSQSLPNSL TQTSDPGRHVMLLRAV R S Q G R H 0 1 1 2 0 2 0 1 0 0 2 0 0 0 2 4 2 0 1 0 0 0 18 0 1964.9076 H0YNE5;H0YLG5;Q96TC7 H0YNE5 44 61 RMDN3 Regulator of microtubule dynamics protein 3 yes no 2 0.013121 46.543 By MS/MS By matching By matching 1 1 1 9027100 3196900 3530700 2299600 2807 802 2977 8777;8778;8779 6139 6139 1091 1 SQSLPTTLLSPVR KAGYPLRRSQSLPTTL TTLLSPVRVVSSVNVR R S Q V R V 0 1 0 0 0 1 0 0 0 0 3 0 0 0 2 3 2 0 0 1 0 0 13 0 1397.7878 E7EUL7;E9PHV5;P28290 E7EUL7 246 258 SSFA2 Sperm-specific antigen 2 yes no 2 3.5706E-05 89.992 By MS/MS By MS/MS By MS/MS 1 1 1 3464600 1308600 1193600 962400 2808 549 2978 8780;8781;8782 6140;6141;6142 6141 720;721 3 SQSMDIDGVSCEK TQSQSLSRSQSMDIDG IDGVSCEKSMSQVDVD R S Q E K S 0 0 0 2 1 1 1 1 0 1 0 1 1 0 0 3 0 0 0 1 0 0 13 0 1454.6017 O95155 O95155 103 115 UBE4B Ubiquitin conjugation factor E4 B yes yes 2 4.0581E-05 90.229 By MS/MS By MS/MS By MS/MS 1 1 1 7455100 2126600 2819200 2509300 2809 1059 2979 8783;8784;8785 6143;6144;6145 6144 1420 3 SQSPHYFR FIRSKIYRSQSPHYFR SQSPHYFRSGRGEGPG R S Q F R S 0 1 0 0 0 1 0 0 1 0 0 0 0 1 1 2 0 0 1 0 0 0 8 0 1020.4777 Q9UKJ3 Q9UKJ3 1033 1040 GPATCH8 G patch domain-containing protein 8 yes yes 2 0.012837 83.499 By MS/MS By matching By MS/MS 1 1 1 4659700 1685200 1785900 1188600 2810 1916 2980 8786;8787;8788 6146;6147 6146 2706 2 SQSSDTEQQSPTSGGGK RSSNPPARSQSSDTEQ SPTSGGGKVAPAQPSE R S Q G K V 0 0 0 1 0 3 1 3 0 0 0 1 0 0 1 5 2 0 0 0 0 0 17 0 1679.7235 E7EX17;P23588 E7EX17 500 516 EIF4B Eukaryotic translation initiation factor 4B yes no 2 2.4286E-32 133.78 By MS/MS By MS/MS By MS/MS 1 1 2 7431700 2796600 2515200 2119900 2811 556 2981 8789;8790;8791;8792 6148;6149;6150;6151;6152 6148 742;743 5 SQSSHSYDDSTLPLIDR VNLNNASRSQSSHSYD STLPLIDRNQKSDKKP R S Q D R N 0 1 0 3 0 1 0 0 1 1 2 0 0 0 1 5 1 0 1 0 0 0 17 0 1919.8861 C9JZR2;O60716;H0YC95 C9JZR2 859 875 CTNND1 Catenin delta-1 yes no 3 0.00056869 73.208 By MS/MS By matching By MS/MS 1 1 1 4177200 1363500 1848500 965240 2812 459 2982 8793;8794;8795 6153;6154 6153 605;606;3658 2 SQSTTSDVPANYK KLRVKPERSQSTTSDV SDVPANYKVIKSSSDA R S Q Y K V 1 0 1 1 0 1 0 0 0 0 0 1 0 0 1 3 2 0 1 1 0 0 13 0 1396.647 Q9NU19 Q9NU19 114 126 TBC1D22B TBC1 domain family member 22B yes yes 2 0.012414 52.391 By MS/MS By matching By matching 1 1 1 2490800 706060 1009200 775570 2813 1861 2983 8796;8797;8798 6155 6155 2629 1 SQSWRQGPDR HSSKEDFKSQSWRQGP SWRQGPDREPESHSPQ K S Q D R E 0 2 0 1 0 2 0 1 0 0 0 0 0 0 1 2 0 1 0 0 0 0 10 1 1215.5745 Q96T54 Q96T54 287 296 KCNK17 Potassium channel subfamily K member 17 yes yes 2 0.016896 62.799 By MS/MS By matching By matching 1 1 1 3689100 1135800 1283900 1269400 2814 1762 2984 8799;8800;8801 6156 6156 2442 1 SQTLPRTSEAQAR ERRRELVRSQTLPRTS RTSEAQARKALFEKWE R S Q A R K 2 2 0 0 0 2 1 0 0 0 1 0 0 0 1 2 2 0 0 0 0 0 13 1 1443.743 Q2TAL5 Q2TAL5 303 315 SMTNL2 Smoothelin-like protein 2 yes yes 2 0.01499 44.639 By MS/MS 1 0 0 0 0 2815 1464 2985 8802 6157 6157 1962;1963;3391 1 SQTPPGVATPPIPK KSPGSAGRSQTPPGVA VATPPIPKITIQIPKG R S Q P K I 1 0 0 0 0 1 0 1 0 1 0 1 0 0 5 1 2 0 0 1 0 0 14 0 1388.7664 Q15648 Q15648 1049 1062 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 3.5074E-16 135.86 By MS/MS By MS/MS By MS/MS 1 1 1 10168000 3786900 2917900 3463200 2816 1447 2986 8803;8804;8805 6158;6159;6160 6158 3387 3 SQTSSIPQKPQTNK GQTGSGQRSQTSSIPQ PQKPQTNKSAYNSYSW R S Q N K S 0 0 1 0 0 3 0 0 0 1 0 2 0 0 2 3 2 0 0 0 0 0 14 1 1542.8002 Q14157;H0Y5H6 Q14157 1063 1076 UBAP2L Ubiquitin-associated protein 2-like yes no 2 0.016998 40.496 By MS/MS 1 167820 0 0 167820 2817 1405 2987 8806 6161 6161 1867;1868;1869;3368 0 SQTTTERDSDTDVEEEELPVENR QRVVLLQRSQTTTERD EELPVENREAVLKDHT R S Q N R E 0 2 1 3 0 1 6 0 0 0 1 0 0 0 1 2 4 0 0 2 0 0 23 1 2678.1791 Q14676 Q14676 445 467 MDC1 Mediator of DNA damage checkpoint protein 1 yes yes 3 0.00044451 58.565 By MS/MS By MS/MS By MS/MS 1 1 1 12169000 4440200 5140400 2588100 2818 1414 2988 8807;8808;8809 6162;6163;6164 6164 1884;3373;3374;3375 3 SQWESPSPTPSYR SGYGSSRRSQWESPSP PSPTPSYRDSERSHRL R S Q Y R D 0 1 0 0 0 1 1 0 0 0 0 0 0 0 3 4 1 1 1 0 0 0 13 0 1520.6896 Q92620 Q92620 228 240 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 2 0.017319 49.216 By matching By MS/MS By matching 1 1 1 1757700 610600 616190 530950 2819 1700 2989 8810;8811;8812 6165 6165 2332;3471 1 SQYHDLQAPDNQQTK FTNSLKTKSQYHDLQA APDNQQTKDIWKKVAE K S Q T K D 1 0 1 2 0 4 0 0 1 0 1 1 0 0 1 1 1 0 1 0 0 0 15 0 1771.8125 Q9H788;H0YAT1 Q9H788 129 143 SH2D4A SH2 domain-containing protein 4A yes no 3 0.017049 47.774 By MS/MS 1 0 0 0 0 2820 1828 2990 8813 6166 6166 2565 1 SRDDLYDQDDSRDFPR AYMPPRSRSRDDLYDQ DDSRDFPRSRDPHYDD R S R P R S 0 3 0 6 0 1 0 0 0 0 1 0 0 1 1 2 0 0 1 0 0 0 16 2 1998.8668 S4R3V8;Q86X29 S4R3V8 482 497 LSR Lipolysis-stimulated lipoprotein receptor yes no 3 0.0001258 82.663 By MS/MS By MS/MS By MS/MS 1 1 1 8821900 3628800 2258600 2934600 2821 1600 2991 8814;8815;8816 6167;6168;6169 6168 3869 3 SREDLSAQPVQTK SSKRNLRKSREDLSAQ SAQPVQTKFPAYERVV K S R T K F 1 1 0 1 0 2 1 0 0 0 1 1 0 0 1 2 1 0 0 1 0 0 13 1 1457.7474 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 605 617 TJP1 Tight junction protein ZO-1 yes no 2 0.015218 57.328 By matching By matching By MS/MS 1 1 1 4375100 1495700 1819500 1059900 2822 98 2992 8817;8818;8819 6170 6170 121 1 SRESLNVDVVK PENMEKRRSRESLNVD SLNVDVVKYESGPDGG R S R V K Y 0 1 1 1 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 11 1 1244.6725 H0YG16;G3V5R9;H0YGB8;H0YJU9;H0YJL0;H0YJT3;G5E9S8;G3V2E7;F8W6L3;G3V3H3;E7EVH7;Q07866 H0YG16 152 162 KLC1 Kinesin light chain 1 yes no 2 0.016581 59.153 By matching By MS/MS By matching 1 2 1 13753000 2927900 7530100 3294700 2823 794 2993 8820;8821;8822;8823 6171 6171 1082 1 SRFSGGFGAR GSSRGRSKSRFSGGFG FSGGFGARDYRQSSGA K S R A R D 1 2 0 0 0 0 0 3 0 0 0 0 0 2 0 2 0 0 0 0 0 0 10 1 1040.5152 A0A0J9YVQ7 A0A0J9YVQ7 108 117 yes yes 2 0.017212 61.435 By matching By MS/MS 1 1 5827600 3138700 0 2689000 2824 234 2994 8824;8825 6172 6172 316 0 SRHENTSQVPLQESRTR KSSSQVNRSRHENTSQ PLQESRTRKRRGSRVS R S R T R K 0 3 1 0 0 2 2 0 1 0 1 0 0 0 1 3 2 0 0 1 0 0 17 2 2024.0148 CON__P20930;P20930 CON__P20930 274 290 FLG Filaggrin yes no 2 0.0068923 45.915 By matching By matching By MS/MS 1 1 1 2612100 1204400 615300 792380 + 2825 472 2995 8826;8827;8828 6173 6173 1 SRKVGLMNR TPRIVLIRSRKVGLMN RKVGLMNRAVQLLILA R S R N R A 0 2 1 0 0 0 0 1 0 0 1 1 1 0 0 1 0 0 0 1 0 0 9 2 1059.5971 F5H2S3;F5H1M6;F5GZQ9;F6SFZ6;Q99571 F5H2S3 25 33 P2RX4 P2X purinoceptor;P2X purinoceptor 4 yes no 3 0.015055 46.39 By MS/MS 1 0 0 0 0 2826 642 2996 8829 6174 6174 865 1 SRLTRATR ________________ SRLTRATRQEMLFLAL R S R T R Q 1 3 0 0 0 0 0 0 0 0 1 0 0 0 0 1 2 0 0 0 0 0 8 2 959.56246 P10720 P10720 7 14 PF4V1 Platelet factor 4 variant;Platelet factor 4 variant(4-74);Platelet factor 4 variant(5-74);Platelet factor 4 variant(6-74) yes yes 2 0.015382 41.502 By MS/MS 1 0 0 0 0 2827 1139 2997 8830 6175 6175 1482;3284;3285 1 SRPTSEGSDIESTEPQK TSISKMKRSRPTSEGS IESTEPQKQCSKKKKK R S R Q K Q 0 1 0 1 0 1 3 1 0 1 0 1 0 0 2 4 2 0 0 0 0 0 17 1 1846.8545 H0YA82;Q4G0J3;D6RFF0 H0YA82 35 51 LARP7 La-related protein 7 yes no 2;3 1.2169E-27 126.84 By MS/MS By MS/MS By MS/MS 2 2 2 27542000 11529000 8602600 7410600 2828 777 2998 8831;8832;8833;8834;8835;8836 6176;6177;6178;6179;6180 6177 1063 5 SRPTSFADELAAR EENTRPKRSRPTSFAD FADELAARIKGDAVGR R S R A R I 3 2 0 1 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 0 0 0 13 1 1419.7106 F8W7U3;J3KP36;E7ESD2;A0A0A0MR88;A0A096LPC5;Q9Y4E1;Q641Q2;A0A0A0MT65;A0A087WYF6 F8W7U3 196 208 FAM21A;FAM21C WASH complex subunit FAM21C;WASH complex subunit FAM21A yes no 2 0.011826 54.486 By matching By MS/MS By matching 1 1 1 18245000 7224200 5179400 5841300 2829 121 2999 8837;8838;8839 6181 6181 2908 0 SRSDIDVNAAAGAK SLPGSLQRSRSDIDVN VNAAAGAKAHHAAGQS R S R A K A 4 1 1 2 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 1 0 0 14 1 1373.6899 E3W994;J3KR49;E7ERI8;E7EW49;O75122;A0A0U1RQI6;B3KR06;E7ENG2 E3W994 368 381 CLASP2 CLIP-associating protein 2 yes no 2;3 7.4623E-28 145.91 By MS/MS By MS/MS By MS/MS 2 2 2 62742000 24789000 20151000 17802000 2830 501 3000 8840;8841;8842;8843;8844;8845 6182;6183;6184;6185;6186;6187 6182 643 6 SRSDIDVNAAASAK STTGSLQRSRSDIDVN VNAAASAKSKVSSSSG R S R A K S 4 1 1 2 0 0 0 0 0 1 0 1 0 0 0 3 0 0 0 1 0 0 14 1 1403.7005 H0Y5T1;F8WA11;Q7Z460 H0Y5T1 379 392 CLASP1 CLIP-associating protein 1 yes no 3 0.0010833 75.608 By MS/MS By matching By matching 1 1 1 7936600 2635300 2316800 2984600 2831 692 3001 8846;8847;8848 6188 6188 924 1 SRSGEGEVSGLMR PHVSGVKRSRSGEGEV GEVSGLMRKVPRVSLE R S R M R K 0 2 0 0 0 0 2 3 0 0 1 0 1 0 0 3 0 0 0 1 0 0 13 1 1363.6514 M0R0K9;Q13263 M0R0K9 96 108 TRIM28 Transcription intermediary factor 1-beta yes no 3 8.587E-05 93.226 By MS/MS By MS/MS By MS/MS 2 2 2 19710000 7606300 6802300 5301300 2832 965 3002;3003 8849;8850;8851;8852;8853;8854 6189;6190;6191;6192 6190 69 1270;1271 4 SRSLSNSNPDISGTPTSPDDEVR PASLNLNRSRSLSNSN TSPDDEVRSIIGSKGL R S R V R S 0 2 2 3 0 0 1 1 0 1 1 0 0 0 3 6 2 0 0 1 0 0 23 1 2430.1259 Q96N67;A0A0U1RRC1;A0A0U1RQJ5 Q96N67 894 916 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 0.0011639 60.133 By MS/MS By MS/MS By matching 1 2 1 5057100 1267700 2832700 956690 2833 1750 3004 8855;8856;8857;8858 6193;6194 6193 2420;2421;2422 2 SRSPLELEPEAK VLRPRNKRSRSPLELE LELEPEAKKLCAKGSD R S R A K K 1 1 0 0 0 0 3 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 12 1 1354.7092 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466 A0A087WTQ7 24 35 DDB2 DNA damage-binding protein 2 yes no 2;3 5.2951E-09 131.53 By MS/MS By MS/MS By MS/MS 2 2 2 16195000 5630800 5898400 4666000 2834 26 3005 8859;8860;8861;8862;8863;8864 6195;6196;6197;6198 6196 28;29 4 SRSQPCDLDAR RGLRNLPRSRSQPCDL QPCDLDARKTGVKRRH R S R A R K 1 2 0 2 1 1 0 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 11 1 1303.5939 Q9NYF3 Q9NYF3 271 281 FAM53C Protein FAM53C yes yes 2 0.0090803 69.045 By matching By matching By MS/MS 1 1 1 4317200 1350900 1981100 985230 2835 1878 3006 8865;8866;8867 6199 6199 2651 1 SRSRASPATHR TSPAPWKRSRSRASPA RASPATHRRSRSRTPL R S R H R R 2 3 0 0 0 0 0 0 1 0 0 0 0 0 1 3 1 0 0 0 0 0 11 2 1224.6436 Q9UQ35 Q9UQ35 1864 1874 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.012466 44.863 By matching By MS/MS By matching 1 1 1 970660 136070 560780 273810 2836 1945 3007 8868;8869;8870 6200 6200 2770;2771;3542 1 SRSSDIVSSVR SYPERLVRSRSSDIVS SDIVSSVRRPMSDPSW R S R V R R 0 2 0 1 0 0 0 0 0 1 0 0 0 0 0 5 0 0 0 2 0 0 11 1 1191.6208 Q14C86;H0Y4E7;H0Y7I9;C9IZ08;F8W9S7 Q14C86 900 910 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2;3 7.3067E-06 131.08 By MS/MS By MS/MS By MS/MS 2 2 2 75240000 25901000 27446000 21893000 2837 1424 3008 8871;8872;8873;8874;8875;8876 6201;6202;6203;6204;6205 6205 1906;1907;1908 5 SRTASLTSAASVDGNR SCMTRLSRSRTASLTS AASVDGNRSRSRTLSQ R S R N R S 3 2 1 1 0 0 0 1 0 0 1 0 0 0 0 4 2 0 0 1 0 0 16 1 1591.7914 G3V578;H0YJT9;A0A0A0MS87;Q9UN36 G3V578 241 256 NDRG2 Protein NDRG2 yes no 2 5.6635E-09 102.84 By matching By MS/MS By MS/MS 1 1 1 9197400 2992400 3431800 2773200 2838 146 3009 8877;8878;8879 6206;6207 6206 196;2919 2 SRTGSESSQTGTSTTSSR EETQERERSRTGSESS GTSTTSSRSKSDQDAR R S R S R S 0 2 0 0 0 1 1 2 0 0 0 0 0 0 0 7 5 0 0 0 0 0 18 1 1815.8195 E7EX17;P23588 E7EX17 418 435 EIF4B Eukaryotic translation initiation factor 4B yes no 3 5.3548E-10 92.264 By matching By MS/MS By MS/MS 1 1 2 14027000 6171600 4730300 3124800 2839 556 3010 8880;8881;8882;8883 6208;6209 6208 744;3077 2 SRTHSTSSSLGSGESPFSR ASMTRLARSRTHSTSS SGESPFSRSVTSNQSD R S R S R S 0 2 0 0 0 0 1 2 1 0 1 0 0 1 1 8 2 0 0 0 0 0 19 1 1965.914 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 232 250 NDRG3 Protein NDRG3 yes no 3 0.00024131 78.78 By MS/MS By MS/MS By MS/MS 1 1 1 5356400 2278500 1722200 1355700 2840 695 3011 8884;8885;8886 6210;6211;6212 6212 930;931;932;933;3137;3138 3 SRTPLLPR PAIRRRSRSRTPLLPR SRTPLLPRKRSRSRSP R S R P R K 0 2 0 0 0 0 0 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 8 1 938.56615 Q9UQ35 Q9UQ35 2032 2039 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.012869 80.737 By MS/MS By matching By matching 1 1 1 28318000 7915800 11710000 8691700 2841 1945 3012 8887;8888;8889 6213 6213 2772;3543 1 SRTPPAIR PVTRRRSRSRTPPAIR SRTPPAIRRRSRSRTP R S R I R R 1 2 0 0 0 0 0 0 0 1 0 0 0 0 2 1 1 0 0 0 0 0 8 1 896.5192 Q9UQ35 Q9UQ35 2020 2027 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.017611 70.808 By matching By MS/MS By matching 1 1 1 20251000 6690300 7711800 5848600 2842 1945 3013 8890;8891;8892 6214 6214 2773;3544 1 SRTPPSAPSQSR PPLLDRARSRTPPSAP PSAPSQSRMTSERAPS R S R S R M 1 2 0 0 0 1 0 0 0 0 0 0 0 0 3 4 1 0 0 0 0 0 12 1 1269.6426 Q9UQ35;I3L3Q8 Q9UQ35 2407 2418 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.00029607 92.952 By MS/MS By matching 1 1 3444200 1253800 0 2190400 2843 1945 3014 8893;8894 6215;6216 6215 2774;3545 2 SRTPSASNDDQQE EQLRSQIRSRTPSASN ASNDDQQE________ R S R Q E - 1 1 1 2 0 2 1 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 13 1 1433.6019 O43765 O43765 301 313 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes yes 2 1.3325E-12 127.71 By MS/MS By MS/MS By MS/MS 1 1 1 23465000 7316600 7275600 8872600 2844 1016 3015 8895;8896;8897 6217;6218;6219;6220;6221;6222;6223 6221 1357;3245 7 SRTSVQTEDDQLIAGQSAR ETEDFDVRSRTSVQTE LIAGQSARAIMAQLPQ R S R A R A 2 2 0 2 0 3 1 1 0 1 1 0 0 0 0 3 2 0 0 1 0 0 19 1 2061.0087 G3XAM7;P35221;A0A0A0MTJ6;A0A0A0MRI5;P26232 G3XAM7 652 670 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 yes no 3 0.0062791 50.957 By MS/MS By matching By MS/MS 2 2 2 33761000 12352000 12562000 8846900 2845 732 3016;3017 8898;8899;8900;8901;8902;8903 6224;6225 6224 986;987;3150 2 SRVSVSPGR QQSNRTRKSRVSVSPG RVSVSPGRTSGKVTKH K S R G R T 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 3 0 0 0 2 0 0 9 1 943.51993 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 421 429 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.017807 88.803 By matching By matching By MS/MS 1 1 1 18129000 6260400 6641800 5226700 2846 322 3018 8904;8905;8906 6226 6226 448;449 1 SSADKIGEVSSPK KESQQHSKSSADKIGE IGEVSSPKASSKLAIM K S S P K A 1 0 0 1 0 0 1 1 0 1 0 2 0 0 1 4 0 0 0 1 0 0 13 1 1303.662 P35251 P35251 302 314 RFC1 Replication factor C subunit 1 yes yes 2 0.014157 58.626 By matching By MS/MS 1 1 4950100 2455300 2494800 0 2847 1218 3019 8907;8908 6227 6227 1570;1571 1 SSATIFGLYSSTDNSK STFKLQTKSSATIFGL YSSTDNSKYFEFTVMG K S S S K Y 1 0 1 1 0 0 0 1 0 1 1 1 0 1 0 5 2 0 1 0 0 0 16 0 1676.7893 P35443 P35443 70 85 THBS4 Thrombospondin-4 yes yes 2 0.014319 44.765 By MS/MS 1 0 0 0 0 2848 1220 3020 8909 6228 6228 1572;1573;1574;1575;1576;3314 1 SSCSSSGRSRR PPHKRWRRSSCSSSGR SSSGRSRRCSSSSSSS R S S R R C 0 3 0 0 1 0 0 1 0 0 0 0 0 0 0 6 0 0 0 0 0 0 11 2 1225.5582 X6R7H2;Q5VV67 X6R7H2 435 445 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 yes no 2 0.016616 40.352 By MS/MS 1 0 0 0 0 2849 1521 3021 8910 6229 6229 2061;2062;2063;2064;2065 1 SSDGSLSHEEDLAK TPSTSGKRSSDGSLSH SHEEDLAKVIELQEII R S S A K V 1 0 0 2 0 0 2 1 1 0 2 1 0 0 0 4 0 0 0 0 0 0 14 0 1473.6583 Q13136;H0YEF9;E9PJZ7 Q13136 238 251 PPFIA1 Liprin-alpha-1 yes no 2 0.0012848 73.415 By MS/MS By MS/MS By MS/MS 2 2 2 5147900 1981700 1893100 1273000 2850 1378 3022 8911;8912;8913;8914;8915;8916 6230;6231;6232 6230 1821;1822;1823 3 SSDIVSSVR PERLVRSRSSDIVSSV SDIVSSVRRPMSDPSW R S S V R R 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 2 0 0 9 0 948.48762 Q14C86;H0Y4E7;H0Y7I9;C9IZ08;F8W9S7 Q14C86 902 910 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 2 0.016282 62.408 By MS/MS 1 4523600 0 4523600 0 2851 1424 3023 8917 6233 6233 1907;1908 1 SSDQPLTVPVSPK KYQGLEIKSSDQPLTV LTVPVSPKFSTRFHC_ K S S P K F 0 0 0 1 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 0 1353.714 Q9ULW0 Q9ULW0 728 740 TPX2 Targeting protein for Xklp2 yes yes 2 2.8234E-145 191.01 By MS/MS By MS/MS By MS/MS 1 1 1 47046000 16167000 15621000 15258000 2852 1932 3024 8918;8919;8920 6234;6235;6236;6237 6236 2730 4 SSEKAIQPK SKKEDLPKSSEKAIQP SEKAIQPKESNIP___ K S S P K E 1 0 0 0 0 1 1 0 0 1 0 2 0 0 1 2 0 0 0 0 0 0 9 1 986.53966 J3QSG5;F5H6S7;Q86VQ3 J3QSG5 70 78 TXNDC2 Thioredoxin domain-containing protein 2 yes no 2 0.0058507 89.886 By MS/MS 1 31189000 0 0 31189000 2853 657 3025 8921 6238 6238 878;879 1 SSELLGQAAR KQVLKGSRSSELLGQA ELLGQAARNMVLQEDA R S S A R N 2 1 0 0 0 1 1 1 0 0 2 0 0 0 0 2 0 0 0 0 0 0 10 0 1030.5407 A0A0B4J1R7;Q96B45 A0A0B4J1R7 45 54 C10orf32-ASMT;C10orf32 UPF0693 protein C10orf32 yes no 2 0.005758 66.595 By MS/MS By MS/MS By MS/MS 1 1 1 1814400 724850 590920 498660 2854 173 3026 8922;8923;8924 6239;6240;6241 6239 236;237 3 SSENVLDEEGGRSPR HFLSKHFRSSENVLDE EEGGRSPRLRPRSRSL R S S P R L 0 2 1 1 0 0 3 2 0 0 1 0 0 0 1 3 0 0 0 1 0 0 15 1 1630.7547 O60307 O60307 134 148 MAST3 Microtubule-associated serine/threonine-protein kinase 3 yes yes 3 0.004665 55.322 By MS/MS 1 370030 0 370030 0 2855 1019 3027 8925 6242 6242 1363 1 SSEPVKETVQTTQSPTPVEK NTEWETVKSSEPVKET QSPTPVEKETVVTTQA K S S E K E 0 0 0 0 0 2 3 0 0 0 0 2 0 0 3 3 4 0 0 3 0 0 20 1 2171.0958 A0A0A0MT33;Q9UPN6 A0A0A0MT33 682 701 SCAF8 Protein SCAF8 yes no 3 8.6445E-13 90.084 By MS/MS By matching By MS/MS 1 1 1 8858200 2460800 3543900 2853500 2856 160 3028 8926;8927;8928 6243;6244 6243 214;2922 2 SSEVLYERPQPTPAFSSR ASGPPVCKSSEVLYER PTPAFSSRTAGPPDPP K S S S R T 1 2 0 0 0 1 2 0 0 0 1 0 0 1 3 4 1 0 1 1 0 0 18 1 2050.012 Q96HB5 Q96HB5 393 410 CCDC120 Coiled-coil domain-containing protein 120 yes yes 3 0.010612 47.545 By matching By matching By MS/MS 1 1 1 1920800 736960 732790 451030 2857 1739 3029 8929;8930;8931 6245 6245 3478;3892 1 SSFSHYSGLK DRHSGSDRSSFSHYSG FSHYSGLKHEDKRGGS R S S L K H 0 0 0 0 0 0 0 1 1 0 1 1 0 1 0 4 0 0 1 0 0 0 10 0 1111.5298 Q8NC51 Q8NC51 202 211 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 3.9667E-09 138.08 By MS/MS By MS/MS By MS/MS 1 1 1 11423000 3984400 3855600 3583400 2858 1649 3030 8932;8933;8934 6246;6247;6248 6247 2256;3876 3 SSFYVNGLTLGGQK GVLVGKDRSSFYVNGL GLTLGGQKCSVIRDSL R S S Q K C 0 0 1 0 0 1 0 3 0 0 2 1 0 1 0 2 1 0 1 1 0 0 14 0 1469.7514 P07737;K7EJ44;I3L3D5 P07737 57 70 PFN1 Profilin-1 yes no 2 0.0093054 59.84 By MS/MS 1 557070 0 557070 0 2859 1120 3031 8935 6249 6249 1 SSGFISELPSEEGK PSLRQEKRSSGFISEL ELPSEEGKKLEHFTKL R S S G K K 0 0 0 0 0 0 3 2 0 1 1 1 0 1 1 4 0 0 0 0 0 0 14 0 1465.6937 Q5VZK9;A0A0U1RQQ1 Q5VZK9 967 980 LRRC16A Leucine-rich repeat-containing protein 16A yes no 2 0.0044564 62.287 By matching By MS/MS By matching 1 1 1 2024900 716850 688810 619230 2860 1524 3032 8936;8937;8938 6250 6250 2070;2071 1 SSGHSSSELSPDAVEK DMKEQSTRSSGHSSSE LSPDAVEKAGMSSNQS R S S E K A 1 0 0 1 0 0 2 1 1 0 1 1 0 0 1 6 0 0 0 1 0 0 16 0 1615.7326 Q9UQ35 Q9UQ35 1378 1393 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0019532 66.809 By matching By MS/MS By matching 1 1 1 5442300 1609000 2528200 1305100 2861 1945 3033 8939;8940;8941 6251 6251 2775 1 SSGSETEQVVDFSDR KYPLRQTRSSGSETEQ QVVDFSDRETKNTADH R S S D R E 0 1 0 2 0 1 2 1 0 0 0 0 0 1 0 4 1 0 0 2 0 0 15 0 1641.7118 O95251 O95251 99 113 KAT7 Histone acetyltransferase KAT7 yes yes 2 0.0060278 54.65 By MS/MS 1 874510 0 874510 0 2862 1064 3034 8942 6252 6252 1427;1428 1 SSGSGSSVADERVDYVVVDQQK STPPRKQKSSGSGSSV YVVVDQQKTLALKSTR K S S Q K T 1 1 0 3 0 2 1 2 0 0 0 1 0 0 0 5 0 0 1 5 0 0 22 1 2311.0928 B7Z3B9;Q13480 B7Z3B9 542 563 GAB1 GRB2-associated-binding protein 1 yes no 3 0.0007756 71.073 By MS/MS By MS/MS By matching 1 1 1 10371000 3789400 4029000 2552300 2863 371 3035 8943;8944;8945 6253;6254 6253 3636 2 SSGSPYGGGYGSGGGSGGYGSR KGGSFGGRSSGSPYGG GSGGYGSRRF______ R S S S R R 0 1 0 0 0 0 0 11 0 0 0 0 0 0 1 6 0 0 3 0 0 0 22 0 1909.7827 P51991;H7C1J8 P51991 355 376 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 2;3 0.0012501 59.339 By MS/MS By matching By MS/MS 2 2 2 205640000 71813000 71343000 62483000 2864 1282 3036 8946;8947;8948;8949;8950;8951 6255;6256;6257 6256 1689;1690 2 SSGSPYGGGYGSGGGSGGYGSRRF KGGSFGGRSSGSPYGG GGYGSRRF________ R S S R F - 0 2 0 0 0 0 0 11 0 0 0 0 0 1 1 6 0 0 3 0 0 0 24 2 2212.9522 P51991;H7C1J8 P51991 355 378 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 3 0.015168 49.176 By matching By MS/MS By matching 1 1 1 8799600 2674600 1731500 4393500 2865 1282 3037 8952;8953;8954 6258 6258 1689;1690 1 SSKRGASPSR STSSKSSRSSKRGASP KRGASPSRHSISEWRM R S S S R H 1 2 0 0 0 0 0 1 0 0 0 1 0 0 1 4 0 0 0 0 0 0 10 2 1031.5472 Q9BZ72 Q9BZ72 313 322 PITPNM2 Membrane-associated phosphatidylinositol transfer protein 2 yes yes 2 0.017743 83.53 By matching By MS/MS By matching 1 1 1 50076000 17727000 17465000 14884000 2866 1801 3038 8955;8956;8957 6259 6259 2506;2507 1 SSLAETLDSTGSLDPQR TENGIAEKSSLAETLD TGSLDPQRSDMIYTIE K S S Q R S 1 1 0 2 0 1 1 1 0 0 3 0 0 0 1 4 2 0 0 0 0 0 17 0 1775.8537 Q9UGH3 Q9UGH3 70 86 SLC23A2 Solute carrier family 23 member 2 yes yes 2 0.0031632 57.288 By matching By MS/MS By matching 1 1 1 2415100 955510 705050 754550 2867 1900 3039 8958;8959;8960 6260 6260 2678 1 SSLCGEEQGSPEELR PLPLTWKRSSLCGEEQ QGSPEELRQREAAEPL R S S L R Q 0 1 0 0 1 1 4 2 0 0 2 0 0 0 1 3 0 0 0 0 0 0 15 0 1676.7312 Q2M1P5 Q2M1P5 1280 1294 KIF7 Kinesin-like protein KIF7 yes yes 2 0.0065087 53.967 By matching By MS/MS By matching 1 1 1 1914300 760870 647460 505980 2868 1462 3040 8961;8962;8963 6261 6261 1958;1959 1 SSLGQSASETEEDTVSVSKK EEMETDARSSLGQSAS DTVSVSKKEKNRKRRN R S S K K E 1 0 0 1 0 1 3 1 0 0 1 2 0 0 0 6 2 0 0 2 0 0 20 1 2067.9808 E9PJ04;H0YCG1;E9PPJ0;Q13435 E9PJ04 300 319 SF3B2 Splicing factor 3B subunit 2 yes no 3 0.0088133 51.166 By MS/MS 1 2095000 0 2095000 0 2869 589 3041 8964 6262 6262 780 1 SSLGSLQTPEAVTTR SPTLPAARSSLGSLQT TPEAVTTRKGTGLLSS R S S T R K 1 1 0 0 0 1 1 1 0 0 2 0 0 0 1 3 3 0 0 1 0 0 15 0 1545.7999 C9J6P4;Q7Z2W4 C9J6P4 386 400 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0043859 57.788 By matching By matching By MS/MS 1 1 1 3705000 1187700 1354500 1162800 2870 418 3042 8965;8966;8967 6263 6263 556;557 1 SSLSGDEEDELFK RPSHHSQRSSLSGDEE DEEDELFKGATLKALR R S S F K G 0 0 0 2 0 0 3 1 0 0 2 1 0 1 0 3 0 0 0 0 0 0 13 0 1454.6413 A0A0A0MT60;Q5T1M5 A0A0A0MT60 1186 1198 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 0.0044144 68.626 By matching By MS/MS By MS/MS 1 1 1 4640100 1625000 1544700 1470400 2871 163 3043 8968;8969;8970 6264;6265 6265 219;220;221 2 SSLSTVSR NGNKEGARSSLSTVSR SSLSTVSRTLEKLKPG R S S S R T 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 4 1 0 0 1 0 0 8 0 835.43995 A6PVL3 A6PVL3 102 109 KNCN Kinocilin yes yes 2 0.01186 77.732 By MS/MS 1 282970 0 0 282970 2872 311 3044 8971 6266 6266 413 1 SSLYEGLEKPESR IRVVNAFRSSLYEGLE GLEKPESRSSIHNFMT R S S S R S 0 1 0 0 0 0 3 1 0 0 2 1 0 0 1 3 0 0 1 0 0 0 13 1 1493.7362 H0YHH6;A0A0U1RQU3;E7ERY9;H0Y7S3;Q01814;P20020 H0YHH6 107 119 ATP2B1;ATP2B2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2;Plasma membrane calcium-transporting ATPase 1 yes no 2;3 4.9622E-05 99.752 By MS/MS By MS/MS By MS/MS 2 2 2 9671700 3913800 3364000 2393800 2873 253 3045 8972;8973;8974;8975;8976;8977 6267;6268;6269;6270;6271 6267 3608 5 SSMIQRYCK VGNGAVGKSSMIQRYC SMIQRYCKGIFTKDYK K S S C K G 0 1 0 0 1 1 0 0 0 1 0 1 1 0 0 2 0 0 1 0 0 0 9 1 1171.5478 Q9ULC3 Q9ULC3 23 31 RAB23 Ras-related protein Rab-23 yes yes 2 0.018819 53.166 By MS/MS 1 0 0 0 0 2874 1922 3046 8978 6272 6272 2714;2715 1 SSMSGLHLVK DGLALHIRSSMSGLHL MSGLHLVKQGRDRKKI R S S V K Q 0 0 0 0 0 0 0 1 1 0 2 1 1 0 0 3 0 0 0 1 0 0 10 0 1057.559 A0A0C4DGT1;Q13085 A0A0C4DGT1 77 86 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 2 0.0017426 82.494 By MS/MS By matching By MS/MS 1 1 1 8714200 2503200 3305700 2905400 2875 206 3047 8979;8980;8981 6273;6274 6274 288 2 SSPEQPRPSTSK GKEARLARSSPEQPRP QPRPSTSKAVSPPHLD R S S S K A 0 1 0 0 0 1 1 0 0 0 0 1 0 0 3 4 1 0 0 0 0 0 12 1 1299.6419 H3BRN3;H3BVD2;H3BUJ5;H3BT57;P29590 H3BRN3 54 65 PML Protein PML yes no 2 4.9939E-07 101.38 By MS/MS By MS/MS 1 1 1825800 1825800 0 0 2876 841 3048 8982;8983 6275;6276 6276 1130;1131 2 SSPGAVAGLSNAPGTPR GDMDGLPKSSPGAVAG SNAPGTPRDDGEMAAA K S S P R D 3 1 1 0 0 0 0 3 0 0 1 0 0 0 3 3 1 0 0 1 0 0 17 0 1537.7849 V9GYB2;U3KPY3;Q9BWG4 V9GYB2 27 43 SSBP4 Single-stranded DNA-binding protein 4 yes no 2 0.0050034 53.557 By matching By MS/MS By MS/MS 1 1 1 1345200 316440 600610 428170 2877 1789 3049 8984;8985;8986 6277;6278 6278 2483;3492 2 SSPLGQNDNSEYVPMLPGK FSLPNPFRSSPLGQND YVPMLPGKFLGRGLDK R S S G K F 0 0 2 1 0 1 1 2 0 0 2 1 1 0 3 3 0 0 1 1 0 0 19 0 2031.9572 O14654 O14654 817 835 IRS4 Insulin receptor substrate 4 yes yes 2;3 9.9726E-39 128.85 By MS/MS By MS/MS By MS/MS 3 3 3 66093000 27896000 20964000 17233000 2878 982 3050 8987;8988;8989;8990;8991;8992;8993;8994;8995 6279;6280;6281;6282;6283;6284;6285 6283 73 3741 7 SSPNVANQPPSPGGK MKNRADHRSSPNVANQ QPPSPGGKSAYASGTT R S S G K S 1 0 2 0 0 1 0 2 0 0 0 1 0 0 4 3 0 0 0 1 0 0 15 0 1435.7056 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1131 1145 MLLT4 Afadin yes no 2 9.9748E-12 108.25 By MS/MS By MS/MS By MS/MS 1 2 1 14684000 4820800 5604900 4258100 2879 316 3051;3052 8996;8997;8998;8999 6286;6287;6288;6289;6290;6291;6292 6288 421;422 7 SSPQLDPLR KTQLSQGRSSPQLDPL SPQLDPLRKSPTMEQA R S S L R K 0 1 0 1 0 1 0 0 0 0 2 0 0 0 2 2 0 0 0 0 0 0 9 0 1011.5349 Q8ND56 Q8ND56 182 190 LSM14A Protein LSM14 homolog A yes yes 2 0.0062252 80.24 By MS/MS By matching By MS/MS 1 1 1 10518000 3462500 3426800 3628900 2880 1651 3053 9000;9001;9002 6293;6294 6294 2261;2262 2 SSPQLDPLRK KTQLSQGRSSPQLDPL PQLDPLRKSPTMEQAV R S S R K S 0 1 0 1 0 1 0 0 0 0 2 1 0 0 2 2 0 0 0 0 0 0 10 1 1139.6299 Q8ND56 Q8ND56 182 191 LSM14A Protein LSM14 homolog A yes yes 3 0.010469 65.234 By matching By MS/MS By matching 1 1 1 1721400 464230 774120 483050 2881 1651 3054 9003;9004;9005 6295 6295 2261;2262 1 SSSADFGTFNTSQSHQTASAVSK AHFDNFPKSSSADFGT QTASAVSKVS______ K S S S K V 3 0 1 1 0 2 0 1 1 0 0 1 0 2 0 7 3 0 0 1 0 0 23 0 2344.0567 C9J2I0;B8ZZY2;P52594 C9J2I0 213 235 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 3 0.0032898 48.354 By MS/MS By matching By matching 1 1 1 9024100 3192300 3410300 2421500 2882 388 3055 9006;9007;9008 6296 6296 510;511 1 SSSEDAESLAPR VRTGKRKRSSSEDAES DAESLAPRSKVKKIIQ R S S P R S 2 1 0 1 0 0 2 0 0 0 1 0 0 0 1 4 0 0 0 0 0 0 12 0 1247.563 H0YA82;Q4G0J3 H0YA82 79 90 LARP7 La-related protein 7 yes no 2 0.00033048 102.33 By MS/MS By MS/MS By MS/MS 1 1 1 15408000 4736700 5993100 4678400 2883 777 3056 9009;9010;9011 6297;6298;6299;6300;6301;6302 6297 1060;1061;1062 6 SSSELNGVSTTSVVK YKPRPVKRSSSELNGV VSTTSVVKTTGSNIPM R S S V K T 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 5 2 0 0 3 0 0 15 0 1493.7573 Q99963 Q99963 263 277 SH3GL3 Endophilin-A3 yes yes 2 0.0040197 58.885 By MS/MS By MS/MS By matching 1 1 1 12372000 4677000 4216700 3478400 2884 1772 3057 9012;9013;9014 6303;6304 6304 2457;2458;2459 2 SSSESYTQSFQSR ETARSHQRSSSESYTQ YTQSFQSRKPFFSWW_ R S S S R K 0 1 0 0 0 2 1 0 0 0 0 0 0 1 0 6 1 0 1 0 0 0 13 0 1492.643 Q9BTU6;E9PAM4 Q9BTU6 460 472 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes no 2 0.0042457 68.972 By matching By matching By MS/MS 1 1 1 12086000 4319700 4245300 3520800 2885 1780 3058 9015;9016;9017 6305 6305 2469;2470 1 SSSFQAEVSLV RVSPGARRSSSFQAEV FQAEVSLV________ R S S L V - 1 0 0 0 0 1 1 0 0 0 1 0 0 1 0 4 0 0 0 2 0 0 11 0 1152.5663 P32241 P32241 447 457 VIPR1 Vasoactive intestinal polypeptide receptor 1 yes yes 2 0.011108 56.434 By matching By MS/MS By matching 1 1 1 20103000 6810400 6554700 6738000 2886 1215 3059 9018;9019;9020 6306 6306 1565 1 SSSFSLPSR NGFSTMQRSSSFSLPS SSFSLPSRANVLSSPC R S S S R A 0 1 0 0 0 0 0 0 0 0 1 0 0 1 1 5 0 0 0 0 0 0 9 0 966.47706 Q14153 Q14153 165 173 FAM53B Protein FAM53B yes yes 2 0.01029 67.993 By MS/MS By matching By MS/MS 1 1 1 3240200 1076800 1328200 835240 2887 1404 3060 9021;9022;9023 6307;6308 6307 1858;1859 2 SSSISEEKGDSDDEKPR LSRHSPRKSSSISEEK DSDDEKPRKGERRSSR K S S P R K 0 1 0 3 0 0 3 1 0 1 0 2 0 0 1 5 0 0 0 0 0 0 17 2 1864.8286 S4R3H4;E7EQT4;Q9UKV3 S4R3H4 148 164 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 7.7116E-09 90.725 By MS/MS By MS/MS By MS/MS 1 1 1 25252000 7086700 7591200 10574000 2888 532 3061 9024;9025;9026 6309;6310;6311;6312;6313;6314 6312 689 6 SSSLDMNR RPQPSHSRSSSLDMNR SSSLDMNRTFTVTTGQ R S S N R T 0 1 1 1 0 0 0 0 0 0 1 0 1 0 0 3 0 0 0 0 0 0 8 0 908.40218 E9PMG1;H0YDT0;Q96D71 E9PMG1 533 540 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 2 0.013802 89.296 By MS/MS By MS/MS By MS/MS 2 1 2 3645000 1727300 0 1917700 2889 609 3062 9027;9028;9029;9030;9031 6315;6316;6317;6318 6318 821;822;823 4 SSSLEGFHNHFK PRAFPSDRSSSLEGFH EGFHNHFKVKNVLTVG R S S F K V 0 0 1 0 0 0 1 1 2 0 1 1 0 2 0 3 0 0 0 0 0 0 12 0 1388.6473 B7Z3B9;Q13480 B7Z3B9 314 325 GAB1 GRB2-associated-binding protein 1 yes no 3 0.0080095 51.979 By MS/MS By matching By MS/MS 1 1 1 5412100 2218700 1700700 1492700 2890 371 3063 9032;9033;9034 6319;6320 6319 496 2 SSSMAAGLER TENKTLPRSSSMAAGL SMAAGLERNGRMRVKA R S S E R N 2 1 0 0 0 0 1 1 0 0 1 0 1 0 0 3 0 0 0 0 0 0 10 0 1007.4706 I3L4C2;Q9UQB8;I3L0Y9;I3L3C6;B4DWA1 I3L4C2 397 406 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 2 0.0029085 79.659 By MS/MS By MS/MS By MS/MS 1 1 1 2224300 685010 796530 742800 2891 893 3064 9035;9036;9037 6321;6322;6323 6322 1198;1199;1200 3 SSSMSSIDLVSASDDVHR FVQKPYSRSSSMSSID SASDDVHRFSSQVEEM R S S H R F 1 1 0 3 0 0 0 0 1 1 1 0 1 0 0 7 0 0 0 2 0 0 18 0 1891.8582 Q9Y5P4 Q9Y5P4 375 392 COL4A3BP Collagen type IV alpha-3-binding protein yes yes 3 0.0076428 54.008 By MS/MS By matching By matching 1 1 1 1556900 657690 516430 382810 2892 1973 3065 9038;9039;9040 6324 6324 179 2821;2822 1 SSSMSSLTGAYTSGIPSSSR DHLNKRSRSSSMSSLT SGIPSSSRNAITSSYS R S S S R N 1 1 0 0 0 0 0 2 0 1 1 0 1 0 1 9 2 0 1 0 0 0 20 0 1961.9 A0A087WY75;A0A075B7F8;A8CG34 A0A087WY75 126 145 POM121C Nuclear envelope pore membrane protein POM 121C yes no 2 0.010851 47.189 By MS/MS By matching 1 1 847930 0 431300 416620 2893 17 3066 9041;9042 6325 6325 18 1 SSSPAPADIAQTVQEDLR TAPEDAQKSSSPAPAD QTVQEDLRTFSWASVT K S S L R T 3 1 0 2 0 2 1 0 0 1 1 0 0 0 2 3 1 0 0 1 0 0 18 0 1883.9225 Q13283 Q13283 230 247 G3BP1 Ras GTPase-activating protein-binding protein 1 yes yes 2 0.0064423 52.569 By matching By MS/MS By MS/MS 1 1 1 230380000 89209000 55978000 85196000 2894 1385 3067 9043;9044;9045 6326;6327 6327 1838;1839 2 SSSPELVTHLK FPKSDDSKSSSPELVT PELVTHLKWDDPYYDI K S S L K W 0 0 0 0 0 0 1 0 1 0 2 1 0 0 1 3 1 0 0 1 0 0 11 0 1196.6401 E9PNR6;H0YE29;Q07960 E9PNR6 49 59 ARHGAP1 Rho GTPase-activating protein 1 yes no 2 0.0023822 82.489 By matching By MS/MS By MS/MS 1 1 1 9219800 2874100 3164500 3181200 2895 612 3068 9046;9047;9048 6328;6329 6329 830;831;832 2 SSSPTQYGLTK ITPVNQSRSSSPTQYG PTQYGLTKNFSSLHLN R S S T K N 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 3 2 0 1 0 0 0 11 0 1167.5772 Q9NYL2 Q9NYL2 635 645 ZAK Mitogen-activated protein kinase kinase kinase MLT yes yes 2 0.0075023 62.088 By matching By MS/MS By matching 1 1 1 4354900 1555300 1515300 1284200 2896 1879 3069 9049;9050;9051 6330 6330 2652 1 SSSPVQVEEEPVR TTPIGNARSSSPVQVE QVEEEPVRLASLRKAI R S S V R L 0 1 0 0 0 1 3 0 0 0 0 0 0 0 2 3 0 0 0 3 0 0 13 0 1441.7049 A0A0J9YVR0;Q8IZ21 A0A0J9YVR0 124 136 PHACTR4 Phosphatase and actin regulator 4 yes no 2 0.0062921 62.633 By MS/MS By MS/MS By MS/MS 1 1 1 22926000 7940500 8079600 6905600 2897 235 3070 9052;9053;9054 6331;6332;6333 6333 317;318;319 3 SSSSSASPSSPSSREEKESK KREQDHSRSSSSSASP SREEKESKKEREEEFK R S S S K K 1 1 0 0 0 0 3 0 0 0 0 2 0 0 2 11 0 0 0 0 0 0 20 2 2039.9243 E9PK91;Q9NYF8;H0YF63 E9PK91 751 770 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.013774 54.974 By matching By MS/MS By matching 1 1 1 3033500 1115700 1322100 595650 2898 596 3071 9055;9056;9057 6334 6334 803 1 SSSSSSQPEHSAMLVSTAASPSLIK SHDRCLEKSSSSSSQP AASPSLIKETTTGYYK K S S I K E 3 0 0 0 0 1 1 0 1 1 2 1 1 0 2 10 1 0 0 1 0 0 25 0 2488.2115 P42166 P42166 291 315 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3 0.0099058 40.142 By MS/MS By matching 1 1 991850 852750 0 139090 2899 1237 3072 9058;9059 6335 6335 1596;1597 1 SSSTSDILEPFTVER NEEQPLPRSSSTSDIL LEPFTVERAKGAVPVI R S S E R A 0 1 0 1 0 0 2 0 0 1 1 0 0 1 1 4 2 0 0 1 0 0 15 0 1666.805 A0A1B0GUI1;Q6GYQ0 A0A1B0GUI1 795 809 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 yes no 2 0.0059933 54.7 By matching By matching By MS/MS 1 1 1 5074700 2069700 1850200 1154900 2900 278 3073 9060;9061;9062 6336 6336 368;369 1 SSSVLSLEGSEK GSPRLVSRSSSVLSLE LSLEGSEKGLARHGSA R S S E K G 0 0 0 0 0 0 2 1 0 0 2 1 0 0 0 5 0 0 0 1 0 0 12 0 1221.6089 A0A0U1RR71;G3V311;A1L390 A0A0U1RR71 582 593 PLEKHG3 Pleckstrin homology domain-containing family G member 3 yes no 2 0.01413 53.377 By MS/MS By matching 1 1 1007200 0 581360 425810 2901 259 3074 9063;9064 6337 6337 340 1 SSTAAYQPIK MHNLAASKSSTAAYQP TAAYQPIKEGRPIKSV K S S I K E 2 0 0 0 0 1 0 0 0 1 0 1 0 0 1 2 1 0 1 0 0 0 10 0 1064.5502 H0YNU5;P54132 H0YNU5 579 588 BLM Bloom syndrome protein yes no 2 0.0038161 62.166 By MS/MS 1 0 0 0 0 2902 812 3075 9065 6338 6338 3175;3715 1 SSTDSLPGPISR ERKERLMRSSTDSLPG SLPGPISRQPLGATSG R S S S R Q 0 1 0 1 0 0 0 1 0 1 1 0 0 0 2 4 1 0 0 0 0 0 12 0 1215.6095 Q9HCD5 Q9HCD5 377 388 NCOA5 Nuclear receptor coactivator 5 yes yes 2 0.0092247 58.04 By MS/MS By matching By matching 1 1 1 3639600 1297100 1367400 975190 2903 1839 3076 9066;9067;9068 6339 6339 2583;2584 1 SSTLSSSSMSLSPK SGSELNSRSSTLSSSS SSMSLSPKLCAEKEAA R S S P K L 0 0 0 0 0 0 0 0 0 0 2 1 1 0 1 8 1 0 0 0 0 0 14 0 1397.6708 O15119 O15119 696 709 TBX3 T-box transcription factor TBX3 yes yes 2 0.00048363 81.992 By matching By matching By MS/MS 1 1 1 2370600 684950 994230 691430 2904 990 3077 9069;9070;9071 6340 6340 1324 1 SSTPLPTISSSAENTR REQGTESRSSTPLPTI SSSAENTRQNGSNDSD R S S T R Q 1 1 1 0 0 0 1 0 0 1 1 0 0 0 2 5 3 0 0 0 0 0 16 0 1646.8111 G5E972;P42167;H0YJH7;P42166 G5E972 158 173 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 2 0.001866 67.648 By MS/MS By MS/MS By matching 1 1 1 107860000 35095000 39318000 33447000 2905 734;1237 3078 9072;9073;9074 6341;6342 6342 999;1000 2 SSTVTEAPIAVVTSR NAPTKRPRSSTVTEAP PIAVVTSRTSEVYVWG R S S S R T 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 3 3 0 0 3 0 0 15 0 1516.8097 Q8TD19 Q8TD19 331 345 NEK9 Serine/threonine-protein kinase Nek9 yes yes 2 5.3513E-07 95.195 By MS/MS By matching By matching 1 1 1 3971600 1387600 1354700 1229300 2906 1672 3079 9075;9076;9077 6343 6343 2294;2295 1 SSVLQRGAQGLGQSSAAGPQGPKGAEK GKEGQAARSSVLQRGA QGPKGAEKRYLCQQCG R S S E K R 4 1 0 0 0 4 1 6 0 0 2 2 0 0 2 4 0 0 0 1 0 0 27 2 2565.3259 A6NM28 A6NM28 124 150 ZFP92 Zinc finger protein 92 homolog yes yes 4 0.0025463 43.523 By MS/MS 1 1394600 0 0 1394600 2907 308 3080 9078 6344 6344 409;410 1 STAALEEDAQILK DEEFASRKSTAALEED EEDAQILKVIEAYCTS K S T L K V 3 0 0 1 0 1 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 0 13 0 1387.7195 E9PDQ5;B1ALK7;Q15052;Q14155 E9PDQ5 447 459 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 6;Rho guanine nucleotide exchange factor 7 yes no 2 0.009336 55.899 By MS/MS By matching By matching 1 1 1 1087600 376490 350060 361060 2908 329 3081 9079;9080;9081 6345 6345 457;2989 1 STAGDTHLGGEDFDNR EDGIFEVKSTAGDTHL GGEDFDNRMVNHFIAE K S T N R M 1 1 1 3 0 0 1 3 1 0 1 0 0 1 0 1 2 0 0 0 0 0 16 0 1690.7183 E9PKE3;P11142;E9PN89;P54652 E9PKE3 202 217 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2;3 4.0918E-05 85.973 By MS/MS By MS/MS By MS/MS 2 2 2 16459000 5658300 7380800 3420200 2909 598 3082 9082;9083;9084;9085;9086;9087 6346;6347;6348;6349 6348 4 STAQQELDGKPASPTPVIVASHTANKEEK GKDFQPSRSTAQQELD HTANKEEKQPDPWPLE R S T E K Q 4 0 1 1 0 2 3 1 1 1 1 3 0 0 3 3 3 0 0 2 0 0 29 2 3032.5415 H0YAC7;P35606 H0YAC7 61 89 COPB2 Coatomer subunit beta yes no 3;4;5 3.1816E-07 67.899 By MS/MS By MS/MS By matching 2 3 2 60147000 32963000 24008000 3176000 2910 778 3083 9088;9089;9090;9091;9092;9093;9094 6350;6351;6352 6350 1064;3168 3 STDSSSVSGSLQQETK RSERRKRRSTDSSSVS GSLQQETKYILPTLEK R S T T K Y 0 0 0 1 0 2 1 1 0 0 1 1 0 0 0 6 2 0 0 1 0 0 16 0 1639.7537 Q9H8G2 Q9H8G2 89 104 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 2 0.002784 58.658 By MS/MS By matching 1 1 7376700 3354400 4022200 0 2911 1834 3084 9095;9096 6353 6353 2576;3505 1 STELLIR REIRRYQKSTELLIRK KSTELLIRKLPFQRLV K S T I R K 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 7 0 830.48617 K7EMV3;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431;K7EP01;Q5TEC6;Q6NXT2 K7EMV3 58 64 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2;H3F3C Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C yes no 2 8.1046E-08 144.29 By MS/MS By MS/MS By matching 1 1 1 15655000 3665200 10686000 1303800 2912 339 3085 9097;9098;9099 6354;6355 6354 2 STELVLSPDMPR SEKAEMKRSTELVLSP VLSPDMPRTTNESLLT R S T P R T 0 1 0 1 0 0 1 0 0 0 2 0 1 0 2 2 1 0 0 1 0 0 12 0 1343.6755 Q8TDY2 Q8TDY2 237 248 RB1CC1 RB1-inducible coiled-coil protein 1 yes yes 2 0.005571 67.952 By matching By MS/MS 1 1 523320 0 274560 248770 2913 1673 3086 9100;9101 6356 6356 2297 1 STGGAPTFNVTVTK FSMDLRTKSTGGAPTF TFNVTVTKTDKTLVLL K S T T K T 1 0 1 0 0 0 0 2 0 0 0 1 0 1 1 1 4 0 0 2 0 0 14 0 1378.7092 P07737;K7EJ44 P07737 92 105 PFN1 Profilin-1 yes no 2 0.0037322 70.089 By matching By MS/MS 1 1 2425300 549330 1876000 0 2914 1120 3087 9102;9103 6357 6357 1 STGGILDVYIFLGPEPK PSPALSWRSTGGILDV IFLGPEPKSVVQQYLD R S T P K S 0 0 0 1 0 0 1 3 0 2 2 1 0 1 2 1 1 0 1 1 0 0 17 0 1804.9611 P10253 P10253 332 348 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes yes 2 0.0078314 54.524 By MS/MS 1 1381200 0 0 1381200 2915 1135 3088 9104 6358 6358 1 STGSATSLASQGER SESGMTVRSTGSATSL SLASQGERRRRTLPQL R S T E R R 2 1 0 0 0 1 1 2 0 0 1 0 0 0 0 4 2 0 0 0 0 0 14 0 1350.6375 H0Y2V6;Q5SW79 H0Y2V6 591 604 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0031612 67.102 By MS/MS By MS/MS By MS/MS 1 1 1 2688700 1104700 974480 609520 2916 743 3089 9105;9106;9107 6359;6360;6361 6360 1015;1016;3159 3 STLTDSLVCK IAHVDHGKSTLTDSLV LTDSLVCKAGIIASAR K S T C K A 0 0 0 1 1 0 0 0 0 0 2 1 0 0 0 2 2 0 0 1 0 0 10 0 1122.5591 P13639 P13639 33 42 EEF2 Elongation factor 2 yes yes 2 0.0031374 86.67 By MS/MS By matching 1 1 1470000 0 1243300 226740 2917 1154 3090 9108;9109 6362 6362 1 STQESLTAGGTDLKR PATRVTRRSTQESLTA AGGTDLKRELHPPATS R S T K R E 1 1 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 0 15 1 1562.79 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345 A0A087X0S7 304 318 LRRC41 Leucine-rich repeat-containing protein 41 yes no 2 8.8802E-07 92.773 By MS/MS By MS/MS By MS/MS 1 1 1 5246100 1902300 1946700 1397200 2918 28 3091 9110;9111;9112 6363;6364;6365 6363 31;2871 3 STRSVENLPECGITHEQR RIPENRIRSTRSVENL CGITHEQRAGSFSTVP R S T Q R A 0 2 1 0 1 1 3 1 1 1 1 0 0 0 1 2 2 0 0 1 0 0 18 1 2112.0018 F8W860;A0A0B4J1S8;Q9UBF8 F8W860 93 110 PI4KB Phosphatidylinositol 4-kinase beta yes no 3 0.0030919 58.246 By matching By matching By MS/MS 1 1 1 7709300 2840400 2948100 1920800 2919 174 3092 9113;9114;9115 6366 6366 238 1 STSAPQMSPGSSDNQSSSPQPAQQK PSSPLPSKSTSAPQMS SPQPAQQKLKQQKKKA K S T Q K L 2 0 1 1 0 5 0 1 0 0 0 1 1 0 4 8 1 0 0 0 0 0 25 0 2531.1194 Q14157;F8W726 Q14157 460 484 UBAP2L Ubiquitin-associated protein 2-like yes no 3 3.8255E-43 106.47 By MS/MS By MS/MS By MS/MS 3 2 2 49280000 19642000 17259000 12379000 2920 1405 3093;3094 9116;9117;9118;9119;9120;9121;9122 6367;6368;6369;6370 6368 1870;1871;1872 4 STSATDTHHVEMAR PALALRARSTSATDTH THHVEMARERSKTVTS R S T A R E 2 1 0 1 0 0 1 0 2 0 0 0 1 0 0 2 3 0 0 1 0 0 14 0 1541.6893 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874 H3BQP2 31 44 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes no 3 0.0046251 53.008 By matching By MS/MS By MS/MS 1 1 1 12841000 5699700 3931100 3210100 2921 823 3095 9123;9124;9125 6371;6372 6371 1106;3182 2 STSGGTAALGCLVK FPLAPSSKSTSGGTAA AALGCLVKDYFPEPVT K S T V K D 2 0 0 0 1 0 0 3 0 0 2 1 0 0 0 2 2 0 0 1 0 0 14 0 1320.6708 A0A0A0MS08;P01857;A0A0A0MS07;P01860 A0A0A0MS08 17 30 IGHG1;IGHG3 Ig gamma-1 chain C region;Ig gamma-3 chain C region yes no 2 0.0071648 63.624 By MS/MS By matching 1 1 1083500 908790 174760 0 2922 142 3096 9126;9127 6373 6373 1 STSPIIGSPPVR SERALPRRSTSPIIGS IIGSPPVRAVPIGTPP R S T V R A 0 1 0 0 0 0 0 1 0 2 0 0 0 0 3 3 1 0 0 1 0 0 12 0 1209.6717 Q86TB9 Q86TB9 177 188 PATL1 Protein PAT1 homolog 1 yes yes 2 0.0011468 83.883 By matching By MS/MS By MS/MS 1 1 1 10677000 3666700 3542100 3467800 2923 1590 3097 9128;9129;9130 6374;6375 6375 2169;2170;2171;3444 1 STSPVTDPSIPIR IRKTKGNRSTSPVTDP TDPSIPIRKKSKDGKG R S T I R K 0 1 0 1 0 0 0 0 0 2 0 0 0 0 3 3 2 0 0 1 0 0 13 0 1368.7249 A0A087WU18;Q99607 A0A087WU18 186 198 ELF4 ETS-related transcription factor Elf-4 yes no 2 0.0079129 58.676 By matching By matching By MS/MS 1 1 1 2313300 704880 1017200 591250 2924 33 3098 9131;9132;9133 6376 6376 35 1 STSQTGNKSSK KNEKVSRKSTSQTGNK QTGNKSSKRKQVDLDG K S T S K R 0 0 1 0 0 1 0 1 0 0 0 2 0 0 0 4 2 0 0 0 0 0 11 1 1123.5469 B4DZ31;Q9NWS1 B4DZ31 576 586 PARPBP PCNA-interacting partner yes no 2 0.0020446 59.8 By matching By MS/MS By MS/MS 1 1 1 988100 353920 291910 342280 2925 354 3099 9134;9135;9136 6377;6378 6377 20;117 483;484;485;2997 2 STSTPNVHMVSTTLPVDSR GSLSQRQRSTSTPNVH TTLPVDSRMIEDAIRS R S T S R M 0 1 1 1 0 0 0 0 1 0 1 0 1 0 2 4 4 0 0 3 0 0 19 0 2027.9946 H7C155;P04049 H7C155 136 154 RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 3 0.011186 42.068 By MS/MS By matching By matching 1 1 1 4314400 1842500 979220 1492700 2926 863 3100 9137;9138;9139 6379 6379 1162;3191 1 STSTPTSPGPR KPLLSVNKSTSTPTSP TPTSPGPRTHSTPSIP K S T P R T 0 1 0 0 0 0 0 1 0 0 0 0 0 0 3 3 3 0 0 0 0 0 11 0 1086.5306 H3BUF6;Q8WWM7;H3BRB0;A0A0C4DGL7 H3BUF6 684 694 ATXN2L Ataxin-2-like protein yes no 2 0.00013322 106.4 By MS/MS By MS/MS By MS/MS 2 2 1 16630000 6158300 7000900 3471200 2927 850 3101 9140;9141;9142;9143;9144 6380;6381;6382;6383;6384;6385;6386;6387;6388;6389 6383 1146;1147 10 STTKVGNIEIK LVGRPIIRSTTKVGNI KVGNIEIK________ R S T I K - 0 0 1 0 0 0 1 1 0 2 0 2 0 0 0 1 2 0 0 1 0 0 11 1 1188.6714 A0A1B0GWD0;A0A1B0GWH0;P61160 A0A1B0GWD0 43 53 ACTR2 Actin-related protein 2 yes no 2 0.017096 51.286 By MS/MS 1 0 0 0 0 2928 287 3102 9145 6390 6390 2963;2964 1 STTNYVDFYSTK YSTQYGLKSTTNYVDF YVDFYSTKRPSYRAEQ K S T T K R 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 2 3 0 2 1 0 0 12 0 1424.646 Q99569;A0A0D9SF60 Q99569 1164 1175 PKP4 Plakophilin-4 yes no 2 0.0059214 51.092 By matching By MS/MS By matching 1 1 1 1920600 576560 864450 479600 2929 1766 3103 9146;9147;9148 6391 6391 3901;3902 1 STTSVSEEDVSSR RTVSGRYKSTTSVSEE SEEDVSSRYSRTDRSG K S T S R Y 0 1 0 1 0 0 2 0 0 0 0 0 0 0 0 5 2 0 0 2 0 0 13 0 1382.6161 Q96IZ0 Q96IZ0 228 240 PAWR PRKC apoptosis WT1 regulator protein yes yes 2 2.7109E-24 113.54 By MS/MS By MS/MS 1 1 0 0 0 0 2930 1741 3104 9149;9150 6392;6393 6393 2392 2 STVTGERQSGDGQESTEPVENK GEEKPDTKSTVTGERQ STEPVENKVGKKGPKH K S T N K V 0 1 1 1 0 2 4 3 0 0 0 1 0 0 1 3 3 0 0 2 0 0 22 1 2334.0571 J3KSY7;O15234 J3KSY7 27 48 CASC3 Protein CASC3 yes no 3 0.0019315 59.537 By MS/MS By matching By matching 1 1 1 19251000 5013100 9431200 4806600 2931 918 3105 9151;9152;9153 6394 6394 1230 1 STYFSDEEELSD SRRPRIKKSTYFSDEE SDEEELSD________ K S T S D - 0 0 0 2 0 0 3 0 0 0 1 0 0 1 0 3 1 0 1 0 0 0 12 0 1420.5518 G3V1V1;Q8TBF4 G3V1V1 165 176 ZCRB1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 yes no 2 0.017387 52.071 By MS/MS 1 0 0 0 0 2932 712 3106 9154 6395 6395 961;962 1 STYTSYPK ________________ STYTSYPKAEPMPSAS K S T P K A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 2 2 0 2 0 0 0 8 0 945.44436 I3L1E3;O14964 I3L1E3 4 11 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 2 0.015028 84.916 By matching By MS/MS 1 1 1053900 420530 0 633410 2933 884 3107 9155;9156 6396 6396 3723 1 SVAAEGALLPQTPPSPR ASPQSGRKSVAAEGAL PQTPPSPRNLIPHGHR K S V P R N 3 1 0 0 0 1 1 1 0 0 2 0 0 0 4 2 1 0 0 1 0 0 17 0 1689.905 H7C2H2;Q86X27 H7C2H2 53 69 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 yes no 2 0.0045393 54.412 By matching By MS/MS By matching 1 1 1 1938800 811250 549220 578370 2934 868 3108 9157;9158;9159 6397 6397 1166 1 SVAVSDEEEVEEEAER PATPSRKRSVAVSDEE EVEEEAERRKERCKRG R S V E R R 2 1 0 1 0 0 7 0 0 0 0 0 0 0 0 2 0 0 0 3 0 0 16 0 1805.7803 Q9Y6X9 Q9Y6X9 739 754 MORC2 MORC family CW-type zinc finger protein 2 yes yes 2 0.001923 61.435 By MS/MS By MS/MS By matching 1 1 1 4201900 1044300 1692400 1465300 2935 1981 3109 9160;9161;9162 6398;6399;6400 6399 2834 3 SVDAYDSYWESR PRVTKPSRSVDAYDSY YDSYWESRKPPLKASL R S V S R K 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 3 0 1 2 1 0 0 12 0 1476.6157 Q9UM82 Q9UM82 253 264 SPATA2 Spermatogenesis-associated protein 2 yes yes 2 0.0015172 81.239 By matching By matching By MS/MS 1 1 1 2132500 880250 656070 596170 2936 1933 3110 9163;9164;9165 6401 6401 2731 1 SVDGDQGLGMEGPYEVLK VDTMLTARSVDGDQGL EGPYEVLKDSSSQENM R S V L K D 0 0 0 2 0 1 2 4 0 0 2 1 1 0 1 1 0 0 1 2 0 0 18 0 1892.8826 Q9NWQ8 Q9NWQ8 150 167 PAG1 Phosphoprotein associated with glycosphingolipid-enriched microdomains 1 yes yes 2 0.0083005 40.066 By MS/MS By matching 1 1 1659700 780960 0 878790 2937 1870 3111 9166;9167 6402 6402 3920 1 SVDIHDSIQPR PLDTISQKSVDIHDSI IHDSIQPRSVDNRPQA K S V P R S 0 1 0 2 0 1 0 0 1 2 0 0 0 0 1 2 0 0 0 1 0 0 11 0 1265.6364 Q9Y6D6;E5RHL7;E5RIF2 Q9Y6D6 1569 1579 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes no 2 0.013234 55.258 By matching By MS/MS By matching 1 1 1 2660100 938350 953720 768000 2938 1979 3112 9168;9169;9170 6403 6403 2832 1 SVEDVRPHHTDANNQSACFEAPDQK QVQKFLSRSVEDVRPH CFEAPDQKTLSAPQEE R S V Q K T 3 1 2 3 1 2 2 0 2 0 0 1 0 1 2 2 1 0 0 2 0 0 25 1 2851.258 E7EPN9;Q9Y520 E7EPN9 880 904 PRRC2C Protein PRRC2C yes no 4 0.0010238 50.029 By matching By MS/MS By matching 1 1 1 6323700 1812100 3206200 1305400 2939 526 3113 9171;9172;9173 6404 6404 676;3059 1 SVELDLNQAHMEETPK ISPERRCRSVELDLNQ AHMEETPKRKGAKVFG R S V P K R 1 0 1 1 0 1 3 0 1 0 2 1 1 0 1 1 1 0 0 1 0 0 16 0 1839.8673 Q14680 Q14680 505 520 MELK Maternal embryonic leucine zipper kinase yes yes 2 0.0058127 52.522 By matching By MS/MS By matching 1 1 1 1764400 688700 610610 465050 2940 1417 3114 9174;9175;9176 6405 6405 1888 1 SVENLPECGITHEQR ENRIRSTRSVENLPEC CGITHEQRAGSFSTVP R S V Q R A 0 1 1 0 1 1 3 1 1 1 1 0 0 0 1 1 1 0 0 1 0 0 15 0 1767.821 F8W860;A0A0B4J1S8;Q9UBF8 F8W860 96 110 PI4KB Phosphatidylinositol 4-kinase beta yes no 2;3 2.1564E-07 96.143 By MS/MS By MS/MS By matching 2 2 1 29781000 12065000 13753000 3963100 2941 174 3115 9177;9178;9179;9180;9181 6406;6407;6408 6407 238 3 SVICDISPLR GGSLSERRSVICDISP ICDISPLRQIVRDPGA R S V L R Q 0 1 0 1 1 0 0 0 0 2 1 0 0 0 1 2 0 0 0 1 0 0 10 0 1158.6067 Q9UGU0 Q9UGU0 865 874 TCF20 Transcription factor 20 yes yes 2 0.0012668 96.229 By MS/MS 1 337150 0 0 337150 2942 1903 3116 9182 6409 6409 2681 1 SVKEDSNLTLQEK PDKMKKSKSVKEDSNL SNLTLQEKKEKIQTGL K S V E K K 0 0 1 1 0 1 2 0 0 0 2 2 0 0 0 2 1 0 0 1 0 0 13 1 1489.7624 H0YLE8;P46940 H0YLE8 871 883 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 3.5354E-16 136.33 By MS/MS By MS/MS By matching 1 1 1 11015000 3992200 3796100 3226800 2943 801 3117 9183;9184;9185 6410;6411;6412 6410 1090 3 SVKTSPTTQSK SNSSPIGKSVKTSPTT TSPTTQSKHNTTSAKG K S V S K H 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 3 3 0 0 1 0 0 11 1 1162.6194 Q5UIP0;H7C2B5 Q5UIP0 2239 2249 RIF1 Telomere-associated protein RIF1 yes no 2 0.0060885 71.806 By MS/MS 1 597650 0 0 597650 2944 1516 3118 9186 6413 6413 2052 1 SVLGQLGITK ITGTYDLKSVLGQLGI LGQLGITKVFSNGADL K S V T K V 0 0 0 0 0 1 0 2 0 1 2 1 0 0 0 1 1 0 0 1 0 0 10 0 1014.6073 P01009;A0A0G2JRN3;A0A024R6I7 P01009 325 334 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.013072 64.841 By MS/MS By matching 1 1 2757900 2350400 0 407510 2945 1085 3119 9187;9188 6414 6414 1 SVNEILGLAESSPNEPK DLEKDIEKSVNEILGL ESSPNEPKAATLAVPP K S V P K A 1 0 2 0 0 0 3 1 0 1 2 1 0 0 2 3 0 0 0 1 0 0 17 0 1782.9 Q9H8G2 Q9H8G2 301 317 CAAP1 Caspase activity and apoptosis inhibitor 1 yes yes 3 0.00088622 68.173 By matching By matching By MS/MS 1 1 1 809470 296970 249020 263470 2946 1834 3120 9189;9190;9191 6415 6415 2577;2578 1 SVNGGPGSPDLAR SPSMGRYRSVNGGPGS PGSPDLARHYKSSSPL R S V A R H 1 1 1 1 0 0 0 3 0 0 1 0 0 0 2 2 0 0 0 1 0 0 13 0 1225.6051 A0A087X2C4;H0YAH0;O60245 A0A087X2C4 297 309 PCDH7 Protocadherin-7 yes no 2 0.00014727 86.539 By MS/MS By MS/MS By MS/MS 2 2 2 8102800 2454500 3072800 2575500 2947 113 3121;3122 9192;9193;9194;9195;9196;9197 6416;6417;6418;6419 6416 146 4 SVPGTTSSPLVGDISPK SVSQDFSRSVPGTTSS LVGDISPKSSPHEVKF R S V P K S 0 0 0 1 0 0 0 2 0 1 1 1 0 0 3 4 2 0 0 2 0 0 17 0 1640.8621 H0Y6S1;Q9UQR0 H0Y6S1 92 108 SCML2 Sex comb on midleg-like protein 2 yes no 2 1.4853E-09 92.31 By MS/MS By MS/MS By MS/MS 1 1 1 11447000 4067000 3726000 3653700 2948 764 3123 9198;9199;9200 6420;6421;6422 6420 1046 3 SVQEGENPDDGVR MSKRKRKRSVQEGENP ENPDDGVRGSPPEDYR R S V V R G 0 1 1 2 0 1 2 2 0 0 0 0 0 0 1 1 0 0 0 2 0 0 13 0 1400.6168 H7C5M1;Q5TCT4;A2A2V2;P42696 H7C5M1 17 29 RBM34 RNA-binding protein 34 yes no 2 0.0001007 95.981 By MS/MS By MS/MS By MS/MS 1 1 1 8166700 2953500 2968800 2244300 2949 296 3124 9201;9202;9203 6423;6424;6425;6426 6423 391 4 SVQSNLELLTQAKSMHHK LLREVEGKSVQSNLEL QAKSMHHKYQNLKCPE K S V H K Y 1 0 1 0 0 2 1 0 2 0 3 2 1 0 0 3 1 0 0 1 0 0 18 1 2050.063 Q495X7 Q495X7 241 258 TRIM60 Tripartite motif-containing protein 60 yes yes 2 0.015455 46.88 By MS/MS 1 0 0 0 0 2950 1471 3125 9204 6427 6427 1969;3394 1 SVSEINSDDELSGK SVQSLDSRSVSEINSD SDDELSGKGYALVPII R S V G K G 0 0 1 2 0 0 2 1 0 1 1 1 0 0 0 4 0 0 0 1 0 0 14 0 1478.6736 F8WF45;P82094 F8WF45 338 351 TMF1 TATA element modulatory factor yes no 2 0.00074151 80.719 By MS/MS By MS/MS By matching 1 1 1 13883000 4880800 5157900 3844400 2951 703 3126 9205;9206;9207 6428;6429;6430 6429 944;945 3 SVSLQEPR RKNPAYLKSVSLQEPR SVSLQEPRSRWQESS_ K S V P R S 0 1 0 0 0 1 1 0 0 0 1 0 0 0 1 2 0 0 0 1 0 0 8 0 914.48214 K7EKA3;K7EIY3;K7EQ53;K7EKI1;K7EPV3;Q6PJF5 K7EKA3 59 66 RHBDF2 Inactive rhomboid protein 2 yes no 2 0.013687 73.841 By matching By MS/MS By matching 1 1 1 2286500 915560 613120 757860 2952 931 3127 9208;9209;9210 6431 6431 1240 1 SVSLTGAPESVQK DSGGLPERSVSLTGAP GAPESVQKAKMMLDDI R S V Q K A 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 3 1 0 0 2 0 0 13 0 1301.6827 M0QXW7;M0QYH3;A0A087WTP3;Q92945;M0R0I5 M0QXW7 47 59 KHSRP Far upstream element-binding protein 2 yes no 2 0.012251 52.576 By matching By MS/MS 1 1 1171000 0 708450 462530 2953 25 3128 9211;9212 6432 6432 26 1 SVSPPPKR PVPPSKARSVSPPPKR SVSPPPKRATSRSRSR R S V K R A 0 1 0 0 0 0 0 0 0 0 0 1 0 0 3 2 0 0 0 1 0 0 8 1 866.4974 Q13247 Q13247 314 321 SRSF6 Serine/arginine-rich splicing factor 6 yes yes 2 0.016908 58.592 By matching By MS/MS 1 1 3523500 1938400 0 1585100 2954 1384 3129 9213;9214 6433 6433 1836;1837 1 SVSPTFLNPSDENLK CLNVQSQRSVSPTFLN NPSDENLKTLCNFAGD R S V L K T 0 0 2 1 0 0 1 0 0 0 2 1 0 1 2 3 1 0 0 1 0 0 15 0 1646.8152 Q9UKA4 Q9UKA4 1240 1254 AKAP11 A-kinase anchor protein 11 yes yes 2 0.015677 46.592 By MS/MS By matching By matching 1 1 1 5856300 2119100 1981900 1755300 2955 1913 3130 9215;9216;9217 6434 6434 2699 1 SVSSFPVPQDNVDTHPGSGK ISRAATRRSVSSFPVP DTHPGSGKEVRVPATA R S V G K E 0 0 1 2 0 1 0 2 1 0 0 1 0 1 3 4 1 0 0 3 0 0 20 0 2053.9705 C9JAY7;E7EVC7;Q676U5 C9JAY7 124 143 ATG16L1 Autophagy-related protein 16-1 yes no 3 0.0011943 64.589 By MS/MS By matching 1 1 5737000 3370600 0 2366400 2956 427 3131 9218;9219 6435 6435 567 1 SVSSNVASVSPIPAGSK GSPRTPNRSVSSNVAS SPIPAGSKKIDPNMKA R S V S K K 2 0 1 0 0 0 0 1 0 1 0 1 0 0 2 6 0 0 0 3 0 0 17 0 1585.8312 E9PHI6;Q9Y6G9 E9PHI6 296 312 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 2 0.0038997 55.589 By MS/MS By MS/MS 1 1 5115900 0 2878900 2237000 2957 584 3132 9220;9221 6436;6437 6436 774;775 2 SVSSVLSSLTPAK PPKPDPVKSVSSVLSS LSSLTPAKVAPVINNG K S V A K V 1 0 0 0 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 2 0 0 13 0 1274.7082 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 347 359 MTA1 Metastasis-associated protein MTA1 yes no 2 0.0092572 75.294 By matching By matching By MS/MS 1 1 1 904700 319370 275870 309460 2958 541 3133 9222;9223;9224 6438 6438 3065 1 SVSSYGNIR SPCTPRLRSVSSYGNI VSSYGNIRAVATARSL R S V I R A 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 3 0 0 1 1 0 0 9 0 981.48796 Q8N122 Q8N122 719 727 RPTOR Regulatory-associated protein of mTOR yes yes 2 0.0032686 88.495 By MS/MS By MS/MS By MS/MS 1 1 1 4664300 1586800 1725500 1352000 2959 1622 3134 9225;9226;9227 6439;6440;6441 6440 2222 3 SVSTPSEAGSQDSGDGAVGSR PPMSPSSKSVSTPSEA GDGAVGSRTLHWDTDP K S V S R T 2 1 0 2 0 1 1 4 0 0 0 0 0 0 1 6 1 0 0 2 0 0 21 0 1949.8563 Q13409;E9PGG1;E7EUM4;E7ERR6;E7ERH4;E7ET01;E7ETL8;E7EQU2;E7ESD3;E7EMU4;E7EV09;E7EQL5 Q13409 92 112 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 2 0.0081575 48.177 By matching By matching By MS/MS 1 1 1 2470700 916960 916370 637330 2960 1387 3135 9228;9229;9230 6442 6442 1842 1 SVTDYAQQNPAAQIPAR ETEQRAPKSVTDYAQQ PAAQIPARQREIEMNR K S V A R Q 4 1 1 1 0 3 0 0 0 1 0 0 0 0 2 1 1 0 1 1 0 0 17 0 1828.9068 A0A0A0MRM8 A0A0A0MRM8 1110 1126 MYO6 yes yes 2;3 0.00047258 80.245 By MS/MS By MS/MS By MS/MS 2 2 2 8476000 2683300 2855000 2937600 2961 136 3136 9231;9232;9233;9234;9235;9236 6443;6444;6445;6446 6444 181;2912;3588 4 SVTEQGAELSNEER DDMAACMKSVTEQGAE AELSNEERNLLSVAYK K S V E R N 1 1 1 0 0 1 4 1 0 0 1 0 0 0 0 2 1 0 0 1 0 0 14 0 1547.7063 E7EX29;P63104;E7ESK7;E5RGE1;E5RIR4;E9PD24;E7EVZ2 E7EX29 28 41 YWHAZ 14-3-3 protein zeta/delta yes no 2 0.0036297 71.085 By MS/MS By matching By matching 1 1 1 6870300 1831500 3703700 1335100 2962 557 3137 9237;9238;9239 6447 6447 1 SVVGTPAYLAPEVLR IGEKSFRRSVVGTPAY YLAPEVLRNKGYNRSL R S V L R N 2 1 0 0 0 0 1 1 0 0 2 0 0 0 2 1 1 0 1 3 0 0 15 0 1570.8719 Q15139;H0Y5M6;F8WBA3;O94806 Q15139 742 756 PRKD1;PRKD3 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase;Serine/threonine-protein kinase D3 no no 2 0.0031665 61.444 By matching By MS/MS By matching 1 1 1 7421000 2704400 2298400 2418200 2963 1434;1051 3138 9240;9241;9242 6448 6448 1412 1 SVVSDLEADDVK NKELKPQKSVVSDLEA DLEADDVKGSVPLSSS K S V V K G 1 0 0 3 0 0 1 0 0 0 1 1 0 0 0 2 0 0 0 3 0 0 12 0 1275.6194 P11388 P11388 1374 1385 TOP2A DNA topoisomerase 2-alpha yes yes 2 0.0023073 75.589 By MS/MS By MS/MS By MS/MS 2 2 2 17372000 5325000 6151600 5895000 2964 1145 3139 9243;9244;9245;9246;9247;9248 6449;6450;6451;6452;6453;6454 6452 1490;1491 6 SVWGSLAVQNSPK MLDAATGKSVWGSLAV LAVQNSPKGCHRDKRT K S V P K G 1 0 1 0 0 1 0 1 0 0 1 1 0 0 1 3 0 1 0 2 0 0 13 0 1371.7147 P18615 P18615 343 355 NELFE Negative elongation factor E yes yes 2 0.00030329 83.869 By MS/MS By matching By MS/MS 1 1 1 3582600 1354200 1210400 1018000 2965 1171 3140 9249;9250;9251 6455;6456 6455 1522;1523 2 SVYAHFPINVVIQENGSLVEIR LGFRYKMRSVYAHFPI NGSLVEIRNFLGEKYI R S V I R N 1 1 2 0 0 1 2 1 1 3 1 0 0 1 1 2 0 0 1 4 0 0 22 0 2483.3173 D6RAN4;H0Y9V9;P32969;E7ESE0 D6RAN4 94 115 RPL9 60S ribosomal protein L9 yes no 3 3.9778E-24 110.67 By MS/MS By MS/MS By MS/MS 2 2 2 34913000 13998000 9480800 11434000 2966 485 3141;3142 9252;9253;9254;9255;9256;9257 6457;6458;6459;6460;6461;6462 6458 29 6 SVYITFSDYESVQGLPAFR VFPSDFCRSVYITFSD VQGLPAFRYKVPAEIL R S V F R Y 1 1 0 1 0 1 1 1 0 1 1 0 0 2 1 3 1 0 2 2 0 0 19 0 2178.0633 Q14108 Q14108 276 294 SCARB2 Lysosome membrane protein 2 yes yes 2 2.0198E-12 91.62 By MS/MS By MS/MS By MS/MS 1 1 1 9657800 3770800 2421700 3465200 2967 1401 3143 9258;9259;9260 6463;6464;6465 6464 3 SWDSSSPVDRPEPEAASPTTR GPIVSRTRSWDSSSPV EAASPTTRTRPVTRSM R S W T R T 2 2 0 2 0 0 2 0 0 0 0 0 0 0 4 5 2 1 0 1 0 0 21 1 2271.0404 C9J0I9;Q86WB0 C9J0I9 311 331 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 1.3021E-05 78.225 By MS/MS By MS/MS 1 1 12779000 7158100 5620700 0 2968 401 3144 9261;9262 6466;6467;6468 6468 540 3 SWGQQAQEYQEQK FSQEVSRRSWGQQAQE AQEYQEQKQRSSSKDG R S W Q K Q 1 0 0 0 0 5 2 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 13 0 1608.7168 Q5VZK9 Q5VZK9 1331 1343 LRRC16A Leucine-rich repeat-containing protein 16A yes yes 2 3.2293E-05 89.827 By MS/MS By matching By matching 1 1 1 4099100 1517300 1626700 955060 2969 1524 3145 9263;9264;9265 6469 6469 2072 1 SWLSPRVSPPASPGP PGNPSRARSWLSPRVS SPPASPGP________ R S W G P - 1 1 0 0 0 0 0 1 0 0 1 0 0 0 5 4 0 1 0 1 0 0 15 1 1533.794 A0A0C4DGU2;Q9Y4U1 A0A0C4DGU2 211 225 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes no 2 0.016931 61.649 By matching By MS/MS 1 1 1156400 0 599190 557250 2970 208 3146 9266;9267 6470 6470 290;291 1 SWSASDPFYTNDR CSPTHISRSWSASDPF DPFYTNDRSILTLSTM R S W D R S 1 1 1 2 0 0 0 0 0 0 0 0 0 1 1 3 1 1 1 0 0 0 13 0 1544.6532 Q9Y2G3 Q9Y2G3 1152 1164 ATP11B Probable phospholipid-transporting ATPase IF yes yes 2 0.0071019 60.448 By MS/MS By matching By matching 1 1 1 1408600 488950 440100 479530 2971 1954 3147 9268;9269;9270 6471 6471 2789 1 SWSPPPEVSR AGAGGRARSWSPPPEV SPPPEVSRSAHVPSLQ R S W S R S 0 1 0 0 0 0 1 0 0 0 0 0 0 0 3 3 0 1 0 1 0 0 10 0 1140.5564 F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31;Q9NR19 F8WCJ4 28 37 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic yes no 2 0.015858 56.043 By matching By MS/MS By matching 1 1 1 5845300 2154600 1945100 1745600 2972 340 3148 9271;9272;9273 6472 6472 467 1 SYCYYFNEDR PEGTNAYRSYCYYFNE CYYFNEDRETWVDADL R S Y D R E 0 1 1 1 1 0 1 0 0 0 0 0 0 1 0 1 0 0 3 0 0 0 10 0 1415.5452 P05451 P05451 45 54 REG1A Lithostathine-1-alpha yes yes 2 0.0032934 89.698 By MS/MS By matching By matching 1 1 1 1715900 848590 409160 458150 2973 1108 3149 9274;9275;9276 6473 6473 1 SYEAYVLNIVR SFRPNDPKSYEAYVLN AYVLNIVRFLEKYKDS K S Y V R F 1 1 1 0 0 0 1 0 0 1 1 0 0 0 0 1 0 0 2 2 0 0 11 0 1325.698 V9GYR2;P05026 V9GYR2 41 51 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 2 0.0055184 72.23 By MS/MS By matching By MS/MS 1 1 1 2941800 1297500 913120 731140 2974 1106 3150 9277;9278;9279 6474;6475 6475 2 SYELPDGQVITIGNER ASSSSLEKSYELPDGQ VITIGNERFRCPEALF K S Y E R F 0 1 1 1 0 1 2 2 0 2 1 0 0 0 1 1 1 0 1 1 0 0 16 0 1789.8846 P63261;P60709;P68133;P68032;P63267;P62736;Q6S8J3;A5A3E0;Q9BYX7;Q562R1 P63261 239 254 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2;POTEE;POTEF;POTEKP;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Beta-actin-like protein 2 no no 2 0.0057944 56.951 By matching By MS/MS By matching 1 1 1 9135600 4740000 2922600 1473000 2975 1305;1482 3151 9280;9281;9282 6476 6476 1 SYGIPFIETSAK KQAQDLARSYGIPFIE PFIETSAKTRQRVEDA R S Y A K T 1 0 0 0 0 0 1 1 0 2 0 1 0 1 1 2 1 0 1 0 0 0 12 0 1311.6711 P01116;P01111 P01116 136 147 KRAS;NRAS GTPase KRas;GTPase KRas, N-terminally processed;GTPase NRas yes no 2 0.011423 64.711 By MS/MS 1 5467300 5467300 0 0 2976 1087 3152 9283 6477 6477 1448;1449;3273 1 SYLEGSSDNQLK SSQSKGNKSYLEGSSD GSSDNQLKDSESTPVD K S Y L K D 0 0 1 1 0 1 1 1 0 0 2 1 0 0 0 3 0 0 1 0 0 0 12 0 1339.6256 E9PJ60;Q9UHI6 E9PJ60 280 291 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.00041755 88.338 By matching By matching By MS/MS 1 1 1 1340100 386240 543300 410520 2977 591 3153 9284;9285;9286 6478 6478 783;784 1 SYLIVHQR CGKSFRTKSYLIVHQR SYLIVHQRTHTGEKPY K S Y Q R T 0 1 0 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 1 1 0 0 8 0 1014.5611 Q9P2J8;Q14587 Q9P2J8 653 660 ZNF624;ZNF268 Zinc finger protein 624;Zinc finger protein 268 yes no 3 0.016194 44.447 By MS/MS 1 0 0 0 0 2978 1412 3154 9287 6479 6479 3843 1 SYNSKTMTCNWGR PHQVGLIRSYNSKTMT TMTCNWGRPLKFCPTK R S Y G R P 0 1 2 0 1 0 0 1 0 0 0 1 1 0 0 2 2 1 1 0 0 0 13 1 1603.6871 K7ERS7;K7EQQ2 K7ERS7 15 27 ZNF573 yes no 2 0.01659 40.475 By MS/MS 1 0 0 0 0 2979 952 3155 9288 6480 6480 1257;3733 1 SYPLDLEGGSEYK LSSYDSDRSYPLDLEG LEGGSEYKYTPPTQPP R S Y Y K Y 0 0 0 1 0 0 2 2 0 0 2 1 0 0 1 2 0 0 2 0 0 0 13 0 1456.6722 B7Z4K4;Q9UET6 B7Z4K4 112 124 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase yes no 2 0.0087797 56.783 By matching By MS/MS 1 1 824280 0 433460 390810 2980 372 3156 9289;9290 6481 6481 498 1 SYSAGNASQLEQLSR NVCGVRKRSYSAGNAS SQLEQLSRARRSGGEL R S Y S R A 2 1 1 0 0 2 1 1 0 0 2 0 0 0 0 4 0 0 1 0 0 0 15 0 1609.7696 Q14678 Q14678 323 337 KANK1 KN motif and ankyrin repeat domain-containing protein 1 yes yes 2 8.4331E-05 84.41 By MS/MS By MS/MS By MS/MS 1 1 1 6440500 2672000 1974500 1793900 2981 1416 3157 9291;9292;9293 6482;6483;6484 6484 1886;1887 3 SYSHDVLPK SSLYNLPRSYSHDVLP YSHDVLPKVSPSSTEA R S Y P K V 0 0 0 1 0 0 0 0 1 0 1 1 0 0 1 2 0 0 1 1 0 0 9 0 1044.524 B7Z3B9;Q13480 B7Z3B9 161 169 GAB1 GRB2-associated-binding protein 1 yes no 2 0.010346 77.379 By MS/MS 1 0 0 0 0 2982 371 3158 9294 6485 6485 497 1 SYSPDGKESPSDK KKDKSRKRSYSPDGKE GKESPSDKKSKTDGSQ R S Y D K K 0 0 0 2 0 0 1 1 0 0 0 2 0 0 2 4 0 0 1 0 0 0 13 1 1395.6154 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87 D6REM6 596 608 MATR3 Matrin-3 yes no 2 0.0085197 62.633 By MS/MS 1 0 0 0 0 2983 244 3159 9295 6486 6486 327;328;329 1 SYSPDGKESPSDKK KKDKSRKRSYSPDGKE KESPSDKKSKTDGSQK R S Y K K S 0 0 0 2 0 0 1 1 0 0 0 3 0 0 2 4 0 0 1 0 0 0 14 2 1523.7104 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87 D6REM6 596 609 MATR3 Matrin-3 yes no 2;3 7.7199E-36 151.59 By MS/MS By MS/MS By MS/MS 3 4 4 133280000 38345000 54895000 40040000 2984 244 3160;3161 9296;9297;9298;9299;9300;9301;9302;9303;9304;9305;9306 6487;6488;6489;6490;6491;6492;6493;6494;6495;6496;6497;6498;6499;6500;6501 6495 327;328;329 15 SYTLVVAK PPWLKKQKSYTLVVAK SYTLVVAKDGGDKKEP K S Y A K D 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 8 0 879.50657 O43491;E9PK52;E9PHY5;E9PII3;E9PJP4;E9PQN0;E9PRG1;E9PIG0;E9PQD2 O43491 87 94 EPB41L2 Band 4.1-like protein 2 yes no 2 1.9484E-15 153.73 By MS/MS By MS/MS By MS/MS 2 2 2 11670000 5022000 3510000 3138300 2985 1012 3162 9307;9308;9309;9310;9311;9312 6502;6503;6504;6505 6502 1350;3752 4 TAADVVSPGANSVDSR TEKVKDPKTAADVVSP GANSVDSRVQRPKEES K T A S R V 3 1 1 2 0 0 0 1 0 0 0 0 0 0 1 3 1 0 0 3 0 0 16 0 1544.7431 Q01804 Q01804 1000 1015 OTUD4 OTU domain-containing protein 4 yes yes 2 1.504E-17 114.96 By MS/MS By MS/MS By MS/MS 1 1 1 7823600 2883500 2672700 2267400 2986 1332 3163 9313;9314;9315 6506;6507;6508 6506 1740 3 TADGRVSPAGGTLDDKPK TKITHLVRTADGRVSP GTLDDKPKEQLQRSLP R T A P K E 2 1 0 3 0 0 0 3 0 0 1 2 0 0 2 1 2 0 0 1 0 0 18 2 1783.9064 C9JA69;Q8WY36 C9JA69 788 805 BBX HMG box transcription factor BBX yes no 3 0.0070954 57.595 By MS/MS By matching By matching 1 1 1 11363000 4595700 3799900 2967400 2987 425 3164 9316;9317;9318 6509 6509 565 0 TADSVFCPHYEK SDIIIPLRTADSVFCP VFCPHYEKVSGDYGHP R T A E K V 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 1 0 1 1 0 0 12 0 1452.6344 P52799 P52799 295 306 EFNB2 Ephrin-B2 yes yes 2 5.5792E-08 114.89 By MS/MS By MS/MS By matching 1 1 1 2670100 1003400 800550 866170 2988 1286 3165 9319;9320;9321 6510;6511 6510 3812 2 TAFISDFAVTADGNAFIGDIK AFDLEIPKTAFISDFA NAFIGDIKDKVTAWKQ K T A I K D 4 0 1 3 0 0 0 2 0 3 0 1 0 3 0 1 2 0 0 1 0 0 21 0 2172.0739 P19827;F8WAS2 P19827 94 114 ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 yes no 2 1.6682E-19 100.4 By MS/MS By MS/MS By MS/MS 1 1 1 33153000 18790000 7527200 6835900 2989 1178 3166 9322;9323;9324 6512;6513;6514 6513 3 TAFQEALDAAGDK MVKQIESKTAFQEALD ALDAAGDKLVVVDFSA K T A D K L 4 0 0 2 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 0 0 0 13 0 1335.6307 P10599 P10599 9 21 TXN Thioredoxin yes yes 2 0.005509 71.221 By MS/MS By MS/MS By MS/MS 1 1 1 2919400 732370 1399900 787130 2990 1138 3167 9325;9326;9327 6515;6516;6517 6515 3 TAFYLAEFFVNEAR SHAPNAVKTAFYLAEF EFFVNEARKNNHHFKS K T A A R K 3 1 1 0 0 0 2 0 0 0 1 0 0 3 0 0 1 0 1 1 0 0 14 0 1676.8199 Q92820 Q92820 267 280 GGH Gamma-glutamyl hydrolase yes yes 2 0.007236 63.473 By matching By MS/MS By MS/MS 1 1 1 2919600 1257300 858850 803480 2991 1711 3168 9328;9329;9330 6518;6519 6518 2 TAFYNEDDSEEEQR RTRNQGRRTAFYNEDD DDSEEEQRQLLFEDTS R T A Q R Q 1 1 1 2 0 1 4 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 14 0 1731.686 Q8WWQ0 Q8WWQ0 1775 1788 PHIP PH-interacting protein yes yes 2 0.0096019 52.576 By matching By MS/MS By MS/MS 1 1 1 12886000 4324800 4686800 3874200 2992 1685 3169 9331;9332;9333 6520;6521 6521 2311 2 TAHNSEADLEESFNEHELEPSSPKSK VYCRKHKKTAHNSEAD EPSSPKSKKKSRKGRP K T A S K K 2 0 2 1 0 0 6 0 2 0 2 2 0 1 2 5 1 0 0 0 0 0 26 1 2911.3108 Q8IWS0 Q8IWS0 134 159 PHF6 PHD finger protein 6 yes yes 4 0.0031428 43.895 By MS/MS By matching By matching 1 1 1 7027800 3395800 1407300 2224700 2993 1612 3170 9334;9335;9336 6522 6522 2209;2210;2211 1 TALPAQSAATLPAR PTSDRKAKTALPAQSA SAATLPARTQETPSAQ K T A A R T 5 1 0 0 0 1 0 0 0 0 2 0 0 0 2 1 2 0 0 0 0 0 14 0 1366.7569 A0A087WUZ3;Q01082 A0A087WUZ3 2180 2193 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.0098626 69.878 By matching By matching By MS/MS 1 1 1 35721000 13026000 12492000 10203000 2994 45 3171 9337;9338;9339 6523 6523 2878 1 TALSGQQDRR SYTHMVCRTALSGQQD LSGQQDRRNDLSHPIH R T A R R N 1 2 0 1 0 2 0 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 10 1 1130.5792 Q8IVL5 Q8IVL5 563 572 LEPREL1 Prolyl 3-hydroxylase 2 yes yes 2 0.0047447 62.546 By matching By MS/MS By matching 1 1 1 7073100 2458500 2403100 2211400 2995 1609 3172 9340;9341;9342 6524 6524 3449 1 TALSSTESCTMKGEEKSPK MAKDLSSKTALSSTES KGEEKSPKTKKDKRPP K T A P K T 1 0 0 0 1 0 3 1 0 0 1 3 1 0 1 4 3 0 0 0 0 0 19 2 2069.9609 Q96T23;H0YER1;H0YCN2 Q96T23 554 572 RSF1 Remodeling and spacing factor 1 yes no 3 0.0048701 49.463 By matching By matching By MS/MS 1 1 1 4570000 2341300 1136900 1091700 2996 1761 3173 9343;9344;9345 6525 6525 165 2441 1 TAPTLSPEHWK SGPPELRKTAPTLSPE TLSPEHWKAVPPVSPE K T A W K A 1 0 0 0 0 0 1 0 1 0 1 1 0 0 2 1 2 1 0 0 0 0 11 0 1265.6404 Q96JM3 Q96JM3 400 410 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0022273 79.492 By MS/MS By MS/MS By matching 1 1 1 6817300 2377600 2454100 1985600 2997 1743 3174 9346;9347;9348 6526;6527 6527 2405 2 TAQPQKREEQTK QTPPPQPRTAQPQKRE QKREEQTKKENEEDKL R T A T K K 1 1 0 0 0 3 2 0 0 0 0 2 0 0 1 0 2 0 0 0 0 0 12 2 1442.7478 E9PGM9;P78332 E9PGM9 798 809 RBM6 RNA-binding protein 6 yes no 3 0.011613 52.576 By MS/MS 1 0 0 0 0 2998 583 3175 9349 6528 6528 3086 1 TAQVPSPPR ITIDDPVRTAQVPSPP AQVPSPPRGKISNIVH R T A P R G 1 1 0 0 0 1 0 0 0 0 0 0 0 0 3 1 1 0 0 1 0 0 9 0 951.51378 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 949 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0017901 129 By MS/MS By MS/MS By MS/MS 1 1 1 25064000 9569400 8575500 6919200 2999 532 3176 9350;9351;9352 6529;6530;6531;6532;6533;6534;6535;6536;6537;6538;6539;6540;6541;6542;6543 6538 690 15 TAQVPSPPRGK ITIDDPVRTAQVPSPP VPSPPRGKISNIVHIS R T A G K I 1 1 0 0 0 1 0 1 0 0 0 1 0 0 3 1 1 0 0 1 0 0 11 1 1136.6302 S4R3H4;E7EQT4;Q9UKV3;G3V3B0 S4R3H4 941 951 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0020127 96.23 By MS/MS By MS/MS By MS/MS 1 1 1 11987000 5033200 3497600 3456300 3000 532 3177 9353;9354;9355 6544;6545;6546;6547 6547 690 4 TASESISNLSEAGSIK PPISNLTKTASESISN LSEAGSIKKGERELKI K T A I K K 2 0 1 0 0 0 2 1 0 2 1 1 0 0 0 5 1 0 0 0 0 0 16 0 1592.7893 F5H1T5;F6VGP8;F5H6A0;J3KP58;P30622 F5H1T5 191 206 CLIP1 CAP-Gly domain-containing linker protein 1 yes no 2 5.0924E-08 98.573 By matching By MS/MS By MS/MS 1 1 1 7738700 3429300 2256000 2053500 3001 647 3178 9356;9357;9358 6548;6549 6549 871 2 TASFSESR TSTPAPSRTASFSESR TASFSESRADEVAPAK R T A S R A 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 3 1 0 0 0 0 0 8 0 883.40356 P53396 P53396 453 460 ACLY ATP-citrate synthase yes yes 2 0.010894 95.775 By MS/MS By MS/MS By MS/MS 1 1 2 25112000 7515300 7166900 10430000 3002 1289 3179 9359;9360;9361;9362 6550;6551;6552;6553;6554;6555;6556;6557 6551 1701;1702 8 TASFSESRADEVAPAK TSTPAPSRTASFSESR ADEVAPAKKAKPAMPQ R T A A K K 4 1 0 1 0 0 2 0 0 0 0 1 0 1 1 3 1 0 0 1 0 0 16 1 1664.8006 P53396 P53396 453 468 ACLY ATP-citrate synthase yes yes 2;3 0.0011616 70.334 By MS/MS By MS/MS By MS/MS 2 2 2 63055000 23154000 22744000 17158000 3003 1289 3180 9363;9364;9365;9366;9367;9368 6558;6559;6560;6561 6559 1701;1702 4 TASFSESRADEVAPAKK TSTPAPSRTASFSESR DEVAPAKKAKPAMPQD R T A K K A 4 1 0 1 0 0 2 0 0 0 0 2 0 1 1 3 1 0 0 1 0 0 17 2 1792.8955 P53396 P53396 453 469 ACLY ATP-citrate synthase yes yes 3 0.0019223 78.456 By MS/MS By matching By matching 1 1 1 158110000 88365000 39255000 30489000 3004 1289 3181 9369;9370;9371 6562 6562 1701;1702 1 TASGSSVTSLDGTR MTRLMRSRTASGSSVT VTSLDGTRSRSHTSEG R T A T R S 1 1 0 1 0 0 0 2 0 0 1 0 0 0 0 4 3 0 0 1 0 0 14 0 1337.6423 E5RJY1;E7ESM1;Q92597 E5RJY1 37 50 NDRG1 Protein NDRG1 yes no 2 1.9106E-22 142.95 By MS/MS By MS/MS By MS/MS 2 1 1 27366000 9024100 10455000 7886400 3005 517 3182;3183 9372;9373;9374;9375 6563;6564;6565;6566 6564 654;655 3 TASLPGYGR ASHIPSSKTASLPGYG ASLPGYGRNGLHRPVS K T A G R N 1 1 0 0 0 0 0 2 0 0 1 0 0 0 1 1 1 0 1 0 0 0 9 0 920.47158 J3QSX6;F8W8M4;A0A0A0MRL6;O14639 J3QSX6 276 284 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.0022501 98.04 By MS/MS By MS/MS By MS/MS 1 1 1 8996800 3209200 3278400 2509100 3006 135 3184 9376;9377;9378 6567;6568;6569 6568 179 3 TASLTSAASVDGNR MTRLSRSRTASLTSAA AASVDGNRSRSRTLSQ R T A N R S 3 1 1 1 0 0 0 1 0 0 1 0 0 0 0 3 2 0 0 1 0 0 14 0 1348.6583 G3V578;H0YJT9;A0A0A0MS87;Q9UN36 G3V578 243 256 NDRG2 Protein NDRG2 yes no 2 3.5792E-05 94.673 By MS/MS By MS/MS By MS/MS 1 1 1 17440000 6055700 5372300 6012400 3007 146 3185 9379;9380;9381 6570;6571;6572 6572 196;2919 3 TASPPPPPK PSPPPKRRTASPPPPP ASPPPPPKRRASPSPP R T A P K R 1 0 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 9 0 890.48617 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 623 631 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2 0.0021546 103.31 By MS/MS By MS/MS 1 1 3322800 1867900 0 1454900 3008 322 3186 9382;9383 6573;6574;6575;6576;6577 6576 450;2986 5 TASPPPPPKR PSPPPKRRTASPPPPP SPPPPPKRRASPSPPP R T A K R R 1 1 0 0 0 0 0 0 0 0 0 1 0 0 5 1 1 0 0 0 0 0 10 1 1046.5873 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 623 632 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 2;3 0.0057865 77.387 By MS/MS By MS/MS By MS/MS 2 1 1 12217000 3835900 4795400 3585300 3009 322 3187 9384;9385;9386;9387 6578;6579;6580;6581 6578 450;2986 4 TASQGPQTDSVIQNSENIK WQHFPRYRTASQGPQT IQNSENIKAYHSGEGH R T A I K A 1 0 2 1 0 3 1 1 0 2 0 1 0 0 1 3 2 0 0 1 0 0 19 0 2015.976 Q9NZN5;E9PMR6 Q9NZN5 1286 1304 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 2 0.0073611 51.225 By matching By MS/MS By matching 1 1 1 7741300 2507300 3415200 1818800 3010 1885 3188 9388;9389;9390 6582 6582 2661 1 TATCHSSSSPPIDAASAEPYGFR STSAVKEKTATCHSSS SAEPYGFRASVLFDTM K T A F R A 4 1 0 1 1 0 1 1 1 1 0 0 0 1 3 5 2 0 1 0 0 0 23 0 2408.0703 P46821 P46821 1811 1833 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 1.4151E-24 96.455 By MS/MS By matching By MS/MS 1 1 1 13749000 5494900 5177700 3076200 3011 1245 3189 9391;9392;9393 6583;6584 6584 3794 2 TATQTGHTLLEDYQIVDNSQR GIKAMVKKTATQTGHT QIVDNSQRENQEGAAN K T A Q R E 1 1 1 2 0 3 1 1 1 1 2 0 0 0 0 1 4 0 1 1 0 0 21 0 2389.151 Q8N0X7 Q8N0X7 616 636 SPG20 Spartin yes yes 3 0.014494 46.982 By MS/MS 1 0 0 0 0 3012 1620 3190 9394 6585 6585 3872 1 TAVIPINGSPR MLLKEPYKTAVIPING IPINGSPRTPRRGQNR K T A P R T 1 1 1 0 0 0 0 1 0 2 0 0 0 0 2 1 1 0 0 1 0 0 11 0 1123.635 P06400 P06400 241 251 RB1 Retinoblastoma-associated protein yes yes 2 0.01003 82.515 By MS/MS By MS/MS By MS/MS 2 2 2 10184000 3041000 4099400 3043600 3013 1111 3191;3192 9395;9396;9397;9398;9399;9400 6586;6587;6588;6589 6589 1456 4 TAVVVGTITDDVR KLPGRENKTAVVVGTI GTITDDVRVQEVPKLK K T A V R V 1 1 0 2 0 0 0 1 0 1 0 0 0 0 0 0 3 0 0 4 0 0 13 0 1344.7249 F8VUA6;F8VYV2;A0A075B7A0;G3V203;H0YHA7;J3QQ67;Q07020 F8VUA6 27 39 RPL18 60S ribosomal protein L18 yes no 2 0.00014083 97.452 By MS/MS By MS/MS By matching 1 1 1 1269400 420270 643450 205730 3014 15 3193 9401;9402;9403 6590;6591 6591 2 TCSLPDLSK ANNPKMLRTCSLPDLS CSLPDLSKLFRTLMDV R T C S K L 0 0 0 1 1 0 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 9 0 1019.4957 Q96PY6 Q96PY6 1050 1058 NEK1 Serine/threonine-protein kinase Nek1 yes yes 2 0.017241 61.435 By MS/MS By MS/MS By matching 1 1 1 13696000 4682800 4932800 4080400 3015 1754 3194 9404;9405;9406 6592;6593 6593 2424 2 TDALTSSPGR SPGRSSRRTDALTSSP ALTSSPGRDLPPFEDE R T D G R D 1 1 0 1 0 0 0 1 0 0 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1003.4934 P49736;C9J013;C9JZ21;F8WDM3 P49736 35 44 MCM2 DNA replication licensing factor MCM2 yes no 2 0.015235 75.819 By MS/MS By MS/MS 1 1 572860 0 0 572860 3016 1258 3195 9407;9408 6594;6595 6594 1652;1653;3330 2 TDCPIHVYFVLDTSESVTMQSPTDILLFHMK RNNNCPEKTDCPIHVY DILLFHMKQFVPQFIS K T D M K Q 0 0 0 3 1 1 1 0 2 2 3 1 2 2 2 3 4 0 1 3 0 0 31 0 3623.735 P12110;C9JH44 P12110 41 71 COL6A2 Collagen alpha-2(VI) chain yes no 4 2.0222E-26 91.583 By MS/MS By MS/MS By MS/MS 1 1 1 43515000 24999000 11969000 6546800 3017 1150 3196 9409;9410;9411 6596;6597;6598;6599 6597 104;105 4 TDESSPVLSPR FHISSHSKTDESSPVL SSPVLSPRKPSHPVMD K T D P R K 0 1 0 1 0 0 1 0 0 0 1 0 0 0 2 3 1 0 0 1 0 0 11 0 1186.583 Q8NA72 Q8NA72 101 111 POC5 Centrosomal protein POC5 yes yes 2 0.01076 56.956 By MS/MS By matching 1 1 1196800 0 655140 541710 3018 1647 3197 9412;9413 6600 6600 2251 1 TDGFAEAIHSPQVAGVPR PTLVVPHRTDGFAEAI PQVAGVPRFRFGPPED R T D P R F 3 1 0 1 0 1 1 2 1 1 0 0 0 1 2 1 1 0 0 2 0 0 18 0 1850.9275 P12270 P12270 2146 2163 TPR Nucleoprotein TPR yes yes 2;3 8.0226E-10 89.011 By MS/MS By MS/MS By MS/MS 2 2 2 22017000 8410400 7802800 5803900 3019 1151 3198 9414;9415;9416;9417;9418;9419 6601;6602;6603;6604 6604 1501 4 TDGSISGDRQPVTVADYISR RRRNRGNRTDGSISGD TVADYISRAESQSRQR R T D S R A 1 2 0 3 0 1 0 2 0 2 0 0 0 0 1 3 2 0 1 2 0 0 20 1 2136.0447 P51116 P51116 598 617 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 0.0020076 64.589 By MS/MS By MS/MS By matching 1 1 1 8207200 2776300 2635200 2795700 3020 1274 3199 9420;9421;9422 6605;6606 6606 1679 2 TDKSSASAPDVDDPEAFPALA GRPNRGSRTDKSSASA PEAFPALA________ R T D L A - 5 0 0 4 0 0 1 0 0 0 1 1 0 1 3 3 1 0 0 1 0 0 21 1 2102.9644 Q8NC51 Q8NC51 388 408 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes yes 2 9.2176E-20 102.57 By MS/MS By MS/MS By MS/MS 1 1 1 49932000 19780000 14955000 15196000 3021 1649 3200 9423;9424;9425 6607;6608;6609 6608 2257;2258;2259;3462 3 TDQTPRLPAPK TEKQQWGRTDQTPRLP TPRLPAPKEQGRAADA R T D P K E 1 1 0 1 0 1 0 0 0 0 1 1 0 0 3 0 2 0 0 0 0 0 11 1 1222.667 F5H1L9 F5H1L9 35 45 JPH4 yes yes 2 0.0067155 99.343 By MS/MS By matching By MS/MS 1 1 2 94109000 25844000 25987000 42278000 3022 645 3201 9426;9427;9428;9429 6610;6611 6610 3113 2 TDSREDEISPPPPNPVVK NLQKAGTRTDSREDEI PPPNPVVKGRRRRGAI R T D V K G 0 1 1 2 0 0 2 0 0 1 0 1 0 0 5 2 1 0 0 2 0 0 18 1 1975.9851 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644 K7EMU2 75 92 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 3 5.54E-23 110.97 By MS/MS By MS/MS By MS/MS 1 1 1 19989000 6866100 7368400 5754100 3023 930 3202 9430;9431;9432 6612;6613;6614;6615;6616;6617 6613 1239 6 TDSTSDGRPAWMR AETEKKTRTDSTSDGR DGRPAWMRTLHTTASN R T D M R T 1 2 0 2 0 0 0 1 0 0 0 0 1 0 1 2 2 1 0 0 0 0 13 1 1478.6572 Q14204 Q14204 4366 4378 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes yes 2 0.016869 68.515 By MS/MS By matching By matching 1 1 1 34446000 11312000 12802000 10333000 3024 1406 3203 9433;9434;9435 6618 6618 1873;3369;3370 1 TDSVIIADQTPTPTR TLKFGPARTDSVIIAD DQTPTPTRFLKNCEEV R T D T R F 1 1 0 2 0 1 0 0 0 2 0 0 0 0 2 1 4 0 0 1 0 0 15 0 1613.8261 K7ESA4;K7ELQ4;P17544 K7ESA4 42 56 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes no 2 0.0042185 72.175 By matching By matching By MS/MS 1 1 1 2332600 647530 900990 784060 3025 943 3204 9436;9437;9438 6619 6619 3224 1 TDTVLILCR EGSSKKVKTDTVLILC DTVLILCRKKVENTRW K T D C R K 0 1 0 1 1 0 0 0 0 1 2 0 0 0 0 0 2 0 0 1 0 0 9 0 1089.5852 Q9HB71 Q9HB71 147 155 CACYBP Calcyclin-binding protein yes yes 2 0.0071642 82.671 By MS/MS 1 156370 0 156370 0 3026 1837 3205 9439 6620 6620 1 TDYIPLLDVDEK VVGETVGKTDYIPLLD PLLDVDEKTGNSESKK K T D E K T 0 0 0 3 0 0 1 0 0 1 2 1 0 0 1 0 1 0 1 1 0 0 12 0 1419.7133 E7EVA0;P27816;H7C456;A0A0J9YVV8;A0A0J9YW37 E7EVA0 45 56 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.011792 60.398 By MS/MS By matching By MS/MS 1 1 1 2220400 739080 628570 852780 3027 551 3206 9440;9441;9442 6621;6622 6622 3670 1 TDYNASVSVPDSSGPER GKNIKALRTDYNASVS PDSSGPERILSISADI R T D E R I 1 1 1 2 0 0 1 1 0 0 0 0 0 0 2 4 1 0 1 2 0 0 17 0 1779.7911 P61978;Q5T6W2 P61978 70 86 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0046867 58.626 By MS/MS By MS/MS By matching 1 1 1 5419700 2041300 2571500 806890 3028 1306 3207 9443;9444;9445 6623;6624 6624 2 TEDSIRDYEDGMEVDTTPTVAGQFEDADVDH QYNMAGVRTEDSIRDY FEDADVDH________ R T E D H - 2 1 0 7 0 1 4 2 1 1 0 0 1 1 1 1 4 0 1 3 0 0 31 1 3456.4423 P54105;E9PMI6;J3KN38 P54105 207 237 CLNS1A Methylosome subunit pICln yes no 3 0.0038491 43.31 By MS/MS By matching By matching 1 1 1 11539000 4220600 2011800 5307100 3029 1294 3208 9446;9447;9448 6625 6625 127 1707;3341 1 TEEARPSPAPGPGTPTGTPTR AAGADSPKTEEARPSP TPTGTPTRTPSRTAPG K T E T R T 2 2 0 0 0 0 2 3 0 0 0 0 0 0 6 1 5 0 0 0 0 0 21 1 2076.0236 Q4KMP7 Q4KMP7 135 155 TBC1D10B TBC1 domain family member 10B yes yes 3 0.012483 54.225 By MS/MS By MS/MS By matching 1 1 1 11592000 5431000 3344100 2816900 3030 1473 3209 9449;9450;9451 6626;6627 6627 3396 2 TEEIFYYYDTNTGK ATRTMNTRTEEIFYYY YYDTNTGKEGKLDIVM R T E G K E 0 0 1 1 0 0 2 1 0 1 0 1 0 1 0 0 3 0 3 0 0 0 14 0 1742.7675 Q6UX06 Q6UX06 450 463 OLFM4 Olfactomedin-4 yes yes 2;3 1.0344E-13 113.54 By MS/MS By MS/MS By MS/MS 3 3 3 189080000 91970000 46062000 51049000 3031 1561 3210;3211 9452;9453;9454;9455;9456;9457;9458;9459;9460 6628;6629;6630;6631;6632;6633;6634;6635;6636;6637;6638;6639;6640 6634 98 13 TEEPLGSPHPSGTVESPGEGPQDTR EVLPAAQKTEEPLGSP GEGPQDTRIEGSVQLS K T E T R I 0 1 0 1 0 1 4 4 1 0 1 0 0 0 5 3 3 0 0 1 0 0 25 0 2560.1678 A0A0A0MR84;M0R202;A0A0B4J2G2;A0A087WUM8;Q9NWS9 A0A0A0MR84 131 155 ZNF446 Zinc finger protein 446 yes no 3 0.0098486 40.197 By MS/MS 1 772130 0 772130 0 3032 39 3212 9461 6641 6641 44 1 TEFLHSQNSLSPR PGDLAEERTEFLHSQN SQNSLSPRSSLSDEAP R T E P R S 0 1 1 0 0 1 1 0 1 0 2 0 0 1 1 3 1 0 0 0 0 0 13 0 1514.7478 F6RY50;Q96FS4 F6RY50 727 739 SIPA1 Signal-induced proliferation-associated protein 1 yes no 2 0.0060294 63.662 By MS/MS By MS/MS By matching 1 1 1 1828200 483370 846210 498630 3033 661 3213 9462;9463;9464 6642;6643 6643 887;888 2 TEIMSPLYQDEAPK QTPPSCLKTEIMSPLY LYQDEAPKGTEASSGT K T E P K G 1 0 0 1 0 1 2 0 0 1 1 1 1 0 2 1 1 0 1 0 0 0 14 0 1620.7705 Q8IY81 Q8IY81 580 593 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.002758 68.277 By MS/MS By MS/MS By MS/MS 1 1 1 3340100 989610 1309500 1040900 3034 1617 3214 9465;9466;9467 6644;6645;6646 6646 2217 3 TEKHSPVSPSTKTER SPASSSSKTEKHSPVS SPSTKTERHSPVSSTK K T E E R H 0 1 0 0 0 0 2 0 1 0 0 2 0 0 2 3 3 0 0 1 0 0 15 2 1682.8588 I6L894;Q01484 I6L894 1842 1856 ANK2 Ankyrin-2 yes no 2 0.018322 45.653 By MS/MS 1 0 0 0 0 3035 895 3215 9468 6647 6647 1202;1203;3207 1 TELFIAAEGIHTGQFVYCGK DPYRFKKRTELFIAAE GQFVYCGKKAQLNIGN R T E G K K 2 0 0 0 1 1 2 3 1 2 1 1 0 2 0 0 2 0 1 1 0 0 20 0 2240.0936 G3V1A1;E9PKZ0;E9PKU4;P62917 G3V1A1 73 92 RPL8 60S ribosomal protein L8 yes no 3 0.00042674 72.184 By MS/MS 1 918480 918480 0 0 3036 602 3216 9469 6648 6648 1 TELSQRPPSAAGIK T E I K 2 1 0 0 0 1 1 1 0 1 1 1 0 0 2 2 1 0 0 0 0 0 14 1 1453.7889 REV__Q96L73 yes yes 2 0.0083046 56.648 By MS/MS By matching 1 1 77765000 0 44675000 33089000 + 3037 2010 3217 9470;9471 6649 6649 2862 0 TENGTCPSPPQPLSPAAALGSGSAAAVPK PVRIQDIKTENGTCPS GSAAAVPKIESPDSSS K T E P K I 6 0 1 0 1 1 1 3 0 0 2 1 0 0 6 4 2 0 0 1 0 0 29 0 2732.3439 Q12948 Q12948 228 256 FOXC1 Forkhead box protein C1 yes yes 3 0.018528 40.094 By matching By matching By MS/MS 1 1 1 3548900 1385500 1196600 966780 3038 1371 3218 9472;9473;9474 6650 6650 1811;1812 0 TESAYDWTSLSSSSIK NYQEALKRTESAYDWT SLSSSSIKSGSSSSSI R T E I K S 1 0 0 1 0 0 1 0 0 1 1 1 0 0 0 6 2 1 1 0 0 0 16 0 1760.8105 C9J164;C9K0J5;Q70E73 C9J164 520 535 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 2 0.0058925 53.448 By matching By matching By MS/MS 1 1 1 5238000 2340300 1437400 1460300 3039 403 3219 9475;9476;9477 6651 6651 3640 1 TESNQEVANPEHYIK PPTTEEEKTESNQEVA ANPEHYIKHPLQNR__ K T E I K H 1 0 2 0 0 1 3 0 1 1 0 1 0 0 1 1 1 0 1 1 0 0 15 0 1757.822 D6RFJ3;H0Y8J7;D6RBW1;P06730 D6RFJ3 22 36 EIF4E Eukaryotic translation initiation factor 4E yes no 3 0.0048269 43.955 By matching By matching By MS/MS 1 1 1 1791600 567650 819190 404750 3040 491 3220 9478;9479;9480 6652 6652 634;3039;3662 1 TESPATAAETASEELDNR EPEPPSGRTESPATAA ASEELDNRSLEEILNS R T E N R S 4 1 1 1 0 0 4 0 0 0 1 0 0 0 1 2 3 0 0 0 0 0 18 0 1890.8443 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3 C9JWF0 39 56 SMC4 Structural maintenance of chromosomes protein 4 yes no 2;3 7.0889E-23 110.6 By MS/MS By MS/MS By MS/MS 2 2 2 26783000 10030000 10015000 6738900 3041 394 3221 9481;9482;9483;9484;9485;9486 6653;6654;6655;6656;6657;6658;6659;6660 6656 527;3017;3018 7 TETISFGSVSPGGVK HFESSTVKTETISFGS SVSPGGVKLEISTKEV K T E V K L 0 0 0 0 0 0 1 3 0 1 0 1 0 1 1 3 2 0 0 2 0 0 15 0 1464.746 A8K968;A0A0A0MRA8;A0A0A0MSA4;J3QS83;A0A0J9YY18;Q9Y2J2 A8K968 622 636 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 2 0.0082105 51.546 By matching By matching By MS/MS 1 1 1 1516100 488200 513350 514520 3042 129 3222 9487;9488;9489 6661 6661 173 1 TEYLNFEKSSSVSR ________________ EKSSSVSRYGASQVED M T E S R Y 0 1 1 0 0 0 2 0 0 0 1 1 0 1 0 4 1 0 1 1 0 0 14 1 1645.7948 E5RGE9 E5RGE9 2 15 ESRP1 yes yes 2 0.0097295 50.806 By matching By matching By MS/MS 1 1 1 1268500 549140 466200 253160 3043 503 3223 9490;9491;9492 6662 6662 645;646 1 TFHIFYYLLSGAGEHLK IRQAKEERTFHIFYYL SGAGEHLKTDLLLEPY R T F L K T 1 0 0 0 0 0 1 2 2 1 3 1 0 2 0 1 1 0 2 0 0 0 17 0 1995.0254 P35579 P35579 273 289 MYH9 Myosin-9 yes yes 4 0.00020182 75.998 By MS/MS 1 672290 0 0 672290 3044 1221 3224 9493 6663 6663 1 TFQARPLSADLTK AKPEVRRRTFQARPLS PLSADLTKLFSSSASS R T F T K L 2 1 0 1 0 1 0 0 0 0 2 1 0 1 1 1 2 0 0 0 0 0 13 1 1446.7831 Q9BY89 Q9BY89 501 513 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.015147 57.414 By matching By matching By MS/MS 1 1 1 4375000 1485700 1670300 1219000 3045 1798 3225 9494;9495;9496 6664 6664 2498 1 TFQGHTNEVNAIK LGQDRPIKTFQGHTNE TNEVNAIKWDPTGNLL K T F I K W 1 0 2 0 0 1 1 1 1 1 0 1 0 1 0 0 2 0 0 1 0 0 13 0 1457.7263 A0A1B0GVH3;A0A0D9SF63;Q9BZK7;Q9BQ87;O60907 A0A1B0GVH3 211 223 TBL1XR1;TBL1Y;TBL1X F-box-like/WD repeat-containing protein TBL1XR1;F-box-like/WD repeat-containing protein TBL1Y;F-box-like/WD repeat-containing protein TBL1X yes no 3 0.0097235 45.357 By MS/MS 1 630750 0 630750 0 3046 213 3226 9497 6665 6665 2938 1 TFQLNPITGDMQLVK HASEEIRKTFQLNPIT TGDMQLVKYLNFEAIN K T F V K Y 0 0 1 1 0 2 0 1 0 1 2 1 1 1 1 0 2 0 0 1 0 0 15 0 1703.8916 Q9Y5E6 Q9Y5E6 291 305 PCDHB3 Protocadherin beta-3 yes yes 2 0.0034258 62.633 By matching By MS/MS By MS/MS 1 1 1 4468400 1766500 927730 1774200 3047 1971 3227 9498;9499;9500 6666;6667 6667 113 3558 0 TFSDGLATR PSRQLVGRTFSDGLAT FSDGLATRTLQPPESP R T F T R T 1 1 0 1 0 0 0 1 0 0 1 0 0 1 0 1 2 0 0 0 0 0 9 0 966.47706 Q86UU1 Q86UU1 428 436 PHLDB1 Pleckstrin homology-like domain family B member 1 yes yes 2 0.012786 65.5 By MS/MS By MS/MS By matching 1 1 1 3375700 1178900 1248600 948150 3048 1596 3228 9501;9502;9503 6668;6669 6669 2181 2 TFSEPGDHPGMLTSGKR SNGRSYKRTFSEPGDH GMLTSGKRSHLESSSR R T F K R S 0 1 0 1 0 0 1 3 1 0 1 1 1 1 2 2 2 0 0 0 0 0 17 1 1815.8574 Q9HA47 Q9HA47 251 267 UCK1 Uridine-cytidine kinase 1 yes yes 3 0.0071704 53.828 By matching By MS/MS 1 1 1076100 0 459580 616500 3049 1835 3229 9504;9505 6670 6670 2579 1 TFVNITPAEVGVLVGK VWAAVPGKTFVNITPA EVGVLVGKDRSSFYVN K T F G K D 1 0 1 0 0 0 1 2 0 1 1 1 0 1 1 0 2 0 0 4 0 0 16 0 1642.9294 P07737;I3L3D5 P07737 39 54 PFN1 Profilin-1 yes no 2 0.002371 70.488 By MS/MS By MS/MS By MS/MS 1 1 1 5743200 1803600 1788400 2151300 3050 1120 3230 9506;9507;9508 6671;6672;6673 6672 3 TGAACLPFYSAASYSALR CNCSSCRRTGAACLPF AASYSALRASLLPQSL R T G L R A 5 1 0 0 1 0 0 1 0 0 2 0 0 1 1 3 1 0 2 0 0 0 18 0 1904.9091 F5H5I6 F5H5I6 25 42 GRSF1 yes yes 3 0.0022007 54.117 By matching By MS/MS By matching 1 1 1 6664600 2879300 1654000 2131200 3051 653 3231 9509;9510;9511 6674 6674 3119;3687 1 TGDLGIPPNPEDRSPSPEPIYNSEGK EDLTRKLRTGDLGIPP PIYNSEGKRLNTREFR R T G G K R 0 1 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 26 1 2765.3144 Q15637 Q15637 67 92 SF1 Splicing factor 1 yes yes 3 0.0016364 52.483 By MS/MS By MS/MS By MS/MS 2 3 2 32294000 13648000 11676000 6970200 3052 1445 3232 9512;9513;9514;9515;9516;9517;9518 6675;6676;6677;6678;6679;6680;6681;6682 6679 1933;1934;1935 8 TGDLGIPPNPEDRSPSPEPIYNSEGKR EDLTRKLRTGDLGIPP IYNSEGKRLNTREFRT R T G K R L 0 2 2 2 0 0 3 3 0 2 1 1 0 0 6 3 1 0 1 0 0 0 27 2 2921.4155 Q15637 Q15637 67 93 SF1 Splicing factor 1 yes yes 3 5.6803E-05 54.728 By MS/MS By matching By matching 2 1 2 7683200 3812500 2094300 1776400 3053 1445 3233 9519;9520;9521;9522;9523 6683;6684 6684 1933;1934;1935 1 TGENKGWSGPK ________________ NKGWSGPKPGFPEPTN - T G P K P 0 0 1 0 0 0 1 3 0 0 0 2 0 0 1 1 1 1 0 0 0 0 11 1 1159.5622 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3;E5RJ67;E5RJN7;E7EVI1 H0YBY0 1 11 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 3 0.015409 42.336 By MS/MS 1 0 0 0 0 3054 165 3234 9524 6685 6685 1 TGISDVFAK NKSAPELKTGISDVFA GISDVFAKNDLAVVDV K T G A K N 1 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 1 0 0 1 0 0 9 0 936.49165 P19338 P19338 325 333 NCL Nucleolin yes yes 2 0.013075 71.692 By MS/MS 1 837270 0 837270 0 3055 1175 3235 9525 6686 6686 1 TGIYQVLNGSR APQPSSVKTGIYQVLN YQVLNGSRLCIKAEMG K T G S R L 0 1 1 0 0 1 0 2 0 1 1 0 0 0 0 1 1 0 1 1 0 0 11 0 1206.6357 E7ETP9;Q9UQV4 E7ETP9 201 211 LAMP3 Lysosome-associated membrane glycoprotein 3 yes no 2 0.0087643 51.009 By matching By matching By MS/MS 1 1 1 5642200 1748800 2324300 1569000 3056 544 3236 9526;9527;9528 6687 6687 703;3066;3669 1 TGLDSPTGIDFSDITANSFTVHWIAPR TPLRGRQKTGLDSPTG TVHWIAPRATITGYRI K T G P R A 2 1 1 3 0 0 0 2 1 3 1 0 0 2 2 3 4 1 0 1 0 0 27 0 2917.4246 P02751;H0Y7Z1 P02751 1356 1382 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 3 3.3547E-16 78.236 By MS/MS 1 0 0 0 0 3057 1095 3237 9529 6688 6688 61 1 TGLQVHSNLHAGRTRVYSGSR REKLIDAKTGLQVHSN TRVYSGSRRSFFCRIK K T G S R R 1 3 1 0 0 1 0 3 2 0 2 0 0 0 0 3 2 0 1 2 0 0 21 2 2295.1945 H0Y5R1;Q8WYA1 H0Y5R1 211 231 ARNTL2 Aryl hydrocarbon receptor nuclear translocator-like protein 2 yes no 3 0.0051133 45.094 By matching By MS/MS 1 1 1283300 817970 0 465330 3058 759 3238 9530;9531 6689 6689 40 1039;3163 1 TGLTSGNVTENLQAYIDK SSTPFPFRTGLTSGNV NLQAYIDKSTQASSGE R T G D K S 1 0 2 1 0 1 1 2 0 1 2 1 0 0 0 1 3 0 1 1 0 0 18 0 1922.9585 Q499Y3 Q499Y3 96 113 Putative uncharacterized protein C10orf88-like yes yes 2 0.012171 47.039 By MS/MS 1 0 0 0 0 3059 1472 3239 9532 6690 6690 1970;3395;3856 1 TGSGSPFAGNSPAR GTVKQTPKTGSGSPFA FAGNSPAREGEQDAAS K T G A R E 2 1 1 0 0 0 0 3 0 0 0 0 0 1 2 3 1 0 0 0 0 0 14 0 1304.6109 Q9UPT8;M0QY97 Q9UPT8 1265 1278 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 2 0.0012897 75.316 By matching By MS/MS By matching 1 2 2 3461000 660220 1398500 1402200 3060 1940 3240;3241 9533;9534;9535;9536;9537 6691;6692 6691 2742;2743;2744 2 TGSNISGASSDISLDEQYK PENLGHKRTGSNISGA ISLDEQYKHQLEETKK R T G Y K H 1 0 1 2 0 1 1 2 0 2 1 1 0 0 0 5 1 0 1 0 0 0 19 0 1970.9069 P22059 P22059 377 395 OSBP Oxysterol-binding protein 1 yes yes 2 0.015343 45.115 By matching By MS/MS By matching 1 1 1 3158600 990900 1014000 1153700 3061 1185 3242 9538;9539;9540 6693 6693 1535 1 TGSRDCSTQTER PLLSAHSKTGSRDCST DCSTQTERGTESNKTA K T G E R G 0 2 0 1 1 1 1 1 0 0 0 0 0 0 0 2 3 0 0 0 0 0 12 1 1396.6001 Q4VCS5;E7ERM3 Q4VCS5 857 868 AMOT Angiomotin yes no 3 0.014783 50.827 By MS/MS By matching By matching 1 1 1 2902700 992490 1252900 657300 3062 1474 3243 9541;9542;9543 6694 6694 1976 1 TGSTSSKEDDYESDAATIVQK VGSAQQVRTGSTSSKE DAATIVQKCLEIYDMI R T G Q K C 2 0 0 3 0 1 2 1 0 1 0 2 0 0 0 4 3 0 1 1 0 0 21 1 2231.0077 Q5T4S7 Q5T4S7 360 380 UBR4 E3 ubiquitin-protein ligase UBR4 yes yes 2;3 3.0901E-13 89.629 By MS/MS By MS/MS By MS/MS 2 2 2 25563000 9444200 9420200 6698500 3063 1506 3244 9544;9545;9546;9547;9548;9549 6695;6696;6697 6696 2037;3414;3415;3859 3 TGSVGIGNLQR GSQTALYRTGSVGIGN VGIGNLQRTSSQRSTL R T G Q R T 0 1 1 0 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 1 0 0 11 0 1100.5938 Q99569 Q99569 445 455 PKP4 Plakophilin-4 yes yes 2 1.0031E-05 116.74 By MS/MS By MS/MS By MS/MS 1 1 1 4155600 1399500 1438100 1317900 3064 1766 3245 9550;9551;9552 6698;6699;6700 6700 2448 3 TGSYGALAEITASK TWRLGLRKTGSYGALA LAEITASKEGQKEKDT K T G S K E 3 0 0 0 0 0 1 2 0 1 1 1 0 0 0 2 2 0 1 0 0 0 14 0 1367.6933 O14974;H0YIS4;H0YHI8;F8VZN8 O14974 443 456 PPP1R12A Protein phosphatase 1 regulatory subunit 12A yes no 2 0.00012893 85.288 By MS/MS By MS/MS By MS/MS 1 1 1 7393400 2482300 2798300 2112800 3065 986 3246 9553;9554;9555 6701;6702;6703 6701 1315;3234;3744 3 TGVAGEDMQDNSGTYGK IYQGFEKKTGVAGEDM DNSGTYGKIWEGSSKC K T G G K I 1 0 1 2 0 1 1 4 0 0 0 1 1 0 0 1 2 0 1 1 0 0 17 0 1728.7261 Q05655 Q05655 320 336 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes yes 2 0.0010496 75.483 By matching By MS/MS By matching 1 1 1 7622600 3052500 2423200 2146900 3066 1345 3247 9556;9557;9558 6704 6704 3824 1 TGVTSTSDSEEEGDDQEGEKKR SKRKNLAKTGVTSTSD DQEGEKKRKGGRNFQT K T G K R K 0 1 0 3 0 1 5 3 0 0 0 2 0 0 0 3 3 0 0 1 0 0 22 2 2383.0259 O75475 O75475 267 288 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 2.7896E-17 90.581 By MS/MS By MS/MS By MS/MS 2 2 1 44855000 24580000 11282000 8992200 3067 1034 3248 9559;9560;9561;9562;9563 6705;6706;6707;6708;6709;6710;6711 6709 1386;1387;1388;3252 7 THINIVVIGHVDSGK ________________ IGHVDSGKSTTTGHLI K T H G K S 0 0 1 1 0 0 0 2 2 3 0 1 0 0 0 1 1 0 0 3 0 0 15 0 1587.8733 Q5VTE0;P68104;A0A087WV01;A0A087WVQ9;Q05639;A6PW80;Q5JR01 Q5VTE0 6 20 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 yes no 3 1.0122E-07 89.136 By MS/MS By matching 1 1 1525900 1249400 0 276490 3068 1317 3249 9564;9565 6712 6712 1 THSFENVSCHLPDSR TSLLHIARTHSFENVS SCHLPDSRTCMSESTW R T H S R T 0 1 1 1 1 0 1 0 2 0 1 0 0 1 1 3 1 0 0 1 0 0 15 0 1784.79 X6RAE7;R4GNB2;R4GN35;Q5VZ89 X6RAE7 133 147 DENND4C DENN domain-containing protein 4C yes no 3 0.0016661 60.937 By MS/MS 1 1452200 0 1452200 0 3069 1523 3250 9566 6713 6713 2068 1 THSTSSSLGSGESPFSR MTRLARSRTHSTSSSL SGESPFSRSVTSNQSD R T H S R S 0 1 0 0 0 0 1 2 1 0 1 0 0 1 1 7 2 0 0 0 0 0 17 0 1722.7809 F8WBF9;Q5TH30;Q9UGV2 F8WBF9 234 250 NDRG3 Protein NDRG3 yes no 2;3 9.362E-17 106.93 By MS/MS By MS/MS By MS/MS 2 2 1 13209000 5350700 4976400 2882200 3070 695 3251 9567;9568;9569;9570;9571 6714;6715;6716;6717 6716 931;932;933;3137;3138 4 TIAATPIQTLPQSQSTPK SQPATPTRTIAATPIQ PQSQSTPKRIDTPSLE R T I P K R 2 0 0 0 0 3 0 0 0 2 1 1 0 0 3 2 4 0 0 0 0 0 18 0 1881.0207 A0A0C4DG88;P14859 A0A0C4DG88 163 180 POU2F1 POU domain protein;POU domain, class 2, transcription factor 1 yes no 2 0.0023349 61.11 By MS/MS By matching By matching 1 1 1 4507700 1614100 1479900 1413700 3071 192 3252 9572;9573;9574 6718 6718 263;264 1 TIAHSPTSFTESSSK TVEHDENRTIAHSPTS SFTESSSKESQNTAEI R T I S K E 1 0 0 0 0 0 1 0 1 1 0 1 0 1 1 5 3 0 0 0 0 0 15 0 1578.7526 Q03164 Q03164 2094 2108 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes yes 2 0.0016423 69.331 By matching By MS/MS By MS/MS 1 1 1 7104200 2824100 2254800 2025300 3072 1339 3253 9575;9576;9577 6719;6720 6719 1756 2 TIASDSEEEAGKELSDK DKSGKREKTIASDSEE AGKELSDKKNEEKDLF K T I D K K 2 0 0 2 0 0 4 1 0 1 1 2 0 0 0 3 1 0 0 0 0 0 17 1 1807.8323 Q96ST2 Q96ST2 435 451 IWS1 Protein IWS1 homolog yes yes 2 0.014552 58.674 By matching By MS/MS By matching 1 1 1 7654900 3106200 4230300 318490 3073 1759 3254 9578;9579;9580 6721 6721 2435;2436 1 TIDLGAAAHYTGDKASPDQNASTHTPQSSVK KRTANPSKTIDLGAAA HTPQSSVKTSVPSSKS K T I V K T 5 0 1 3 0 2 0 2 2 1 1 2 0 0 2 4 4 0 1 1 0 0 31 1 3167.5119 Q14677 Q14677 284 314 CLINT1 Clathrin interactor 1 yes yes 4 0.002905 41.222 By MS/MS By matching 1 1 6782000 0 4365800 2416200 3074 1415 3255 9581;9582 6722 6722 1885 1 TIETSPSLSR PKKVLDGKTIETSPSL ETSPSLSRMPNQHACK K T I S R M 0 1 0 0 0 0 1 0 0 1 1 0 0 0 1 3 2 0 0 0 0 0 10 0 1089.5666 H3BP78;F8W7R3;Q9NVI1 H3BP78 230 239 FANCI Fanconi anemia group I protein yes no 2 0.0014908 101.35 By MS/MS By MS/MS 1 1 5560100 2828600 2731600 0 3075 690 3256 9583;9584 6723;6724 6724 920;921 2 TIEYLEEVAITFAK GLKPPEERTIEYLEEV EVAITFAKGLADKKIS R T I A K G 2 0 0 0 0 0 3 0 0 2 1 1 0 1 0 0 2 0 1 1 0 0 14 0 1625.8552 P40939 P40939 236 249 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 2 0.00029421 84.169 By MS/MS By MS/MS 1 1 2859500 0 1450100 1409400 3076 1232 3257 9585;9586 6725;6726 6726 2 TIGGGDDSFNTFFSETGAGK DGQMPSDKTIGGGDDS FSETGAGKHVPRAVFV K T I G K H 1 0 1 2 0 0 1 5 0 1 0 1 0 3 0 2 3 0 0 0 0 0 20 0 2006.8858 P68363;F5H5D3;Q9BQE3;Q71U36;F8VVB9;F8VRZ4;F8VS66;F8VQQ4;Q6PEY2;Q13748;F8VRK0;F8VX09;F8VWV9;F8VXZ7;F8W0F6 P68363 41 60 TUBA1B;TUBA1C;TUBA1A;TUBA3E;TUBA3C Tubulin alpha-1B chain;Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2 0.0032273 59.607 By MS/MS By MS/MS By matching 1 1 1 3551300 1557400 761160 1232800 3077 1318 3258 9587;9588;9589 6727;6728 6727 1721 2 TIGKLEPSYVIR IGCTCLPRTIGKLEPS LEPSYVIRKFLDAQRI R T I I R K 0 1 0 0 0 0 1 1 0 2 1 1 0 0 1 1 1 0 1 1 0 0 12 1 1374.7871 A0A087X2J4;B7Z879;A0A087WXL6;Q9H270 A0A087X2J4 71 82 VPS11 Vacuolar protein sorting-associated protein 11 homolog yes no 3 0.015476 44.612 By matching By MS/MS By matching 1 1 1 2931700 710540 1082000 1139200 3078 73 3259 9590;9591;9592 6729 6729 90;3581 0 TIISYIDEQFER INCRDCFKTIISYIDE YIDEQFERYLHDESGL K T I E R Y 0 1 0 1 0 1 2 0 0 3 0 0 0 1 0 1 1 0 1 0 0 0 12 0 1512.746 B5MCX3;Q15019;C9IY94;C9IZU3;C9JQJ4;C9J938;H7C310;C9JB25;C9J2Q4 B5MCX3 77 88 SEPT2 Septin-2 yes no 2 0.0155 58.699 By MS/MS By matching 1 1 1556800 0 602120 954730 3079 365 3260 9593;9594 6730 6730 1 TIQEVLEEQSEDEDR ARKQLPKRTIQEVLEE EQSEDEDREAKRKKEE R T I D R E 0 1 0 2 0 2 5 0 0 1 1 0 0 0 0 1 1 0 0 1 0 0 15 0 1818.8119 M0R0Q7;P18858 M0R0Q7 132 146 LIG1 DNA ligase;DNA ligase 1 yes no 2 0.0047175 56.793 By MS/MS By matching By matching 1 1 1 3074400 1037500 864460 1172400 3080 967 3261 9595;9596;9597 6731 6731 1277 1 TIQEVLEEQSEDEDREAK ARKQLPKRTIQEVLEE EDEDREAKRKKEEEEE R T I A K R 1 1 0 2 0 2 6 0 0 1 1 1 0 0 0 1 1 0 0 1 0 0 18 1 2146.9866 M0R0Q7;P18858 M0R0Q7 132 149 LIG1 DNA ligase;DNA ligase 1 yes no 2;3 6.8011E-26 118.48 By MS/MS By MS/MS By matching 2 2 2 49843000 18229000 15682000 15933000 3081 967 3262 9598;9599;9600;9601;9602;9603 6732;6733;6734 6733 1277 3 TISDGTISASK DYSQHIYRTISDGTIS DGTISASKQESGKMDA R T I S K Q 1 0 0 1 0 0 0 1 0 2 0 1 0 0 0 3 2 0 0 0 0 0 11 0 1078.5506 A0A075B6Q2;S4R347;Q5T0N5 A0A075B6Q2 139 149 FNBP1L Formin-binding protein 1-like yes no 2 0.0024094 76.24 By MS/MS By matching By MS/MS 1 1 1 4651000 1527200 1675400 1448400 3082 8 3263 9604;9605;9606 6735;6736 6735 5 2 TISINSPK LLPSEITRTISINSPK TISINSPKAQTVQAVR R T I P K A 0 0 1 0 0 0 0 0 0 2 0 1 0 0 1 2 1 0 0 0 0 0 8 0 858.48108 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6 A0A0J9YX88 862 869 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 0.012415 80.755 By MS/MS By matching By matching 1 1 1 2953300 948220 1114300 890830 3083 238 3264 9607;9608;9609 6737 6737 321 1 TISIVALHESIKIPDK T I D K 1 0 0 1 0 0 1 0 1 4 1 2 0 0 1 2 1 0 0 1 0 0 16 1 1763.0193 REV__Q5CZC0 yes no 2 0.0073278 44.252 By MS/MS By matching 1 1 38959000 0 19732000 19228000 + 3084 2000 3265 9610;9611 6738 6738 2853;2854;3566 1 TISNPEVVMKR MPETSFTRTISNPEVV NPEVVMKRRRQQKLEK R T I K R R 0 1 1 0 0 0 1 0 0 1 0 1 1 0 1 1 1 0 0 2 0 0 11 1 1272.686 A8MQ02;J3KN01;P55196;Q5TIG5;F8W9I4;E9PFY5 A8MQ02 173 183 MLLT4 Afadin yes no 2 0.011642 64.121 By matching By matching By MS/MS 1 1 1 2605300 689480 889980 1025800 3085 316 3266 9612;9613;9614 6739 6739 423 1 TISTSDPAEVLVK QEKAFSLKTISTSDPA DPAEVLVKNSQPIKTL K T I V K N 1 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 2 0 0 2 0 0 13 0 1358.7293 E5RJU9;Q86UE4 E5RJU9 436 448 MTDH Protein LYRIC yes no 2 0.0061523 63.181 By matching By MS/MS 1 1 856380 485710 0 370660 3086 516 3267 9615;9616 6740 6740 653 1 TITLEVEPSDTIENVK FVKTLTGKTITLEVEP SDTIENVKAKIQDKEG K T I V K A 0 0 1 1 0 0 3 0 0 2 1 1 0 0 1 1 3 0 0 2 0 0 16 0 1786.92 J3QSA3;F5GZ39;M0R1V7;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H2Z3;F5H265;B4DV12;F5H388;F5H747;F5GXK7;J3QKN0;Q5PY61;Q96C32;P62987;P62979;P0CG47;P0CG48 J3QSA3 12 27 UBB;UBC;UBA52;RPS27A Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin yes no 2 2.5847E-07 93.623 By matching By MS/MS By MS/MS 1 1 1 6544900 2417600 2800300 1326900 3087 350 3268 9617;9618;9619 6741;6742 6741 2 TITVPVSGSPK KAVVPVSKTITVPVSG VPVSGSPKMSNIMQSI K T I P K M 0 0 0 0 0 0 0 1 0 1 0 1 0 0 2 2 2 0 0 2 0 0 11 0 1084.6128 E9PMC9;Q7Z589 E9PMC9 231 241 C11orf30;EMSY Protein EMSY yes no 2 0.0084028 60.49 By matching By matching By MS/MS 1 1 1 1671300 596800 582550 491950 3088 608 3269 9620;9621;9622 6743 6743 815;816 1 TIVTTLQDSIR VLELRGLRTIVTTLQD TTLQDSIRKVTEENKE R T I I R K 0 1 0 1 0 1 0 0 0 2 1 0 0 0 0 1 3 0 0 1 0 0 11 0 1245.6929 P07996;CON__Q28194 P07996 289 299 THBS1 Thrombospondin-1 yes no 2 0.0038453 81.338 By MS/MS By matching By MS/MS 1 1 1 1509900 1098800 251480 159680 + 3089 1124 3270 9623;9624;9625 6744;6745;6746 6744 3 TIYVGHREPPPGAEAYIPQRYPDNR EENWVDSRTIYVGHRE PQRYPDNRIVSSKYTF R T I N R I 2 3 1 1 0 1 2 2 1 2 0 0 0 0 5 0 1 0 3 1 0 0 25 2 2895.4416 E9PEJ6;P98196 E9PEJ6 25 49 ATP11A Phospholipid-transporting ATPase;Probable phospholipid-transporting ATPase IH yes no 3 0.0059708 43.611 By matching By MS/MS By matching 1 1 1 3031000 1640300 519880 870880 3090 569 3271 9626;9627;9628 6747 6747 3082;3673 1 TKDSGSISLQETR SISSFLSKTKDSGSIS SISLQETRRQKKTLKK K T K T R R 0 1 0 1 0 1 1 1 0 1 1 1 0 0 0 3 2 0 0 0 0 0 13 1 1420.7158 Q9H2G2 Q9H2G2 774 786 SLK STE20-like serine/threonine-protein kinase yes yes 2 0.0072626 69.331 By MS/MS By matching By MS/MS 1 1 1 9748300 3373600 3998900 2375800 3091 1816 3272 9629;9630;9631 6748;6749 6749 2545;2546 1 TKEGLEEEQSTSGRLLQEESK QSVQNPEKTKEGLEEE RLLQEESKKEGAVALH K T K S K K 0 1 0 0 0 2 6 2 0 0 3 2 0 0 0 3 2 0 0 0 0 0 21 2 2377.1609 Q5T3U5 Q5T3U5 843 863 ABCC10 Multidrug resistance-associated protein 7 yes yes 3 0.012836 48.112 By MS/MS 1 0 0 0 0 3092 1504 3273 9632 6750 6750 2031;2032;2033;3412;3413 1 TKEVYELLDSPGK GKKLYEGKTKEVYELL ELLDSPGKVLLQSKDQ K T K G K V 0 0 0 1 0 0 2 1 0 0 2 2 0 0 1 1 1 0 1 1 0 0 13 1 1477.7664 E9PBS1;P22234 E9PBS1 18 30 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 2 5.7576E-05 88.507 By MS/MS 1 631150 0 0 631150 3093 561 3274 9633 6751 6751 747;3671 1 TKEYVSNDAAQSDDEEKLQSQPTDTDGGR LTLHIMRRTKEYVSND PTDTDGGRLKQKTTQL R T K G R L 2 1 1 5 0 3 3 2 0 0 1 2 0 0 1 3 3 0 1 1 0 0 29 2 3183.4076 Q5JSH3;H7BY83 Q5JSH3 392 420 WDR44 WD repeat-containing protein 44 yes no 3 4.6843E-09 74.748 By matching By MS/MS By matching 1 1 1 22723000 9415400 7758200 5548900 3094 1486 3275 9634;9635;9636 6752 6752 1995;1996 1 TKFASDDEHDEHDENGATGPVK KVQFQGKKTKFASDDE NGATGPVKRAREETDK K T K V K R 2 0 1 4 0 0 3 2 2 0 0 2 0 1 1 1 2 0 0 1 0 0 22 1 2398.0309 P05455 P05455 362 383 SSB Lupus La protein yes yes 3;4 1.9968E-11 87.062 By MS/MS By MS/MS By MS/MS 3 3 2 33555000 9499500 20354000 3701700 3095 1109 3276;3277 9637;9638;9639;9640;9641;9642;9643;9644 6753;6754;6755;6756;6757;6758 6755 63 1455;3275 6 TKFASDDEHDEHDENGATGPVKR KVQFQGKKTKFASDDE GATGPVKRAREETDKE K T K K R A 2 1 1 4 0 0 3 2 2 0 0 2 0 1 1 1 2 0 0 1 0 0 23 2 2554.132 P05455 P05455 362 384 SSB Lupus La protein yes yes 3;4;5 4.3314E-45 116.27 By MS/MS By MS/MS By MS/MS 7 7 7 290430000 96650000 87167000 106610000 3096 1109 3278;3279 9645;9646;9647;9648;9649;9650;9651;9652;9653;9654;9655;9656;9657;9658;9659;9660;9661;9662;9663;9664;9665 6759;6760;6761;6762;6763;6764;6765;6766;6767;6768;6769 6762 63 1455;3275 11 TKPSVDSTR WEESSQGRTKPSVDST KPSVDSTREEKERWIR R T K T R E 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 2 2 0 0 1 0 0 9 1 989.51417 A0A087X1U1;F5GXM9;E7EUN2;Q9UPQ3;H7C0A7 A0A087X1U1 590 598 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 2 0.016108 54.157 By MS/MS 1 0 0 0 0 3097 107 3280 9666 6770 6770 136;137;2901 1 TKPTQAAGPSSPQKPPTPEETK PQKQPQTKTKPTQAAG PPTPEETKAASPVLQE K T K T K A 2 0 0 0 0 2 2 1 0 0 0 3 0 0 6 2 4 0 0 0 0 0 22 2 2276.1648 F5H8D7;P18887 F5H8D7 406 427 XRCC1 DNA repair protein XRCC1 yes no 3 0.00027587 75.319 By MS/MS By MS/MS By MS/MS 2 2 3 20053000 7619700 7168100 5265300 3098 660 3281;3282 9667;9668;9669;9670;9671;9672;9673 6771;6772;6773;6774 6773 886;3124;3125 4 TKSNSLSEQLAINTSPDAVK KSGEPALRTKSNSLSE NTSPDAVKAKLISRMA R T K V K A 2 0 2 1 0 1 1 0 0 1 2 2 0 0 1 4 2 0 0 1 0 0 20 1 2102.0855 A0A0A0MT60;Q5T1M5;X6RKW4 A0A0A0MT60 367 386 FKBP15 Peptidyl-prolyl cis-trans isomerase;FK506-binding protein 15 yes no 2 0.0046106 72.21 By matching By MS/MS By matching 1 1 1 2428000 1152600 639020 636450 3099 163 3283 9674;9675;9676 6775 6775 217;218;2925 1 TLDFDPLLSPASPK ACGATLKRTLDFDPLL LLSPASPKRRRCAPLS R T L P K R 1 0 0 2 0 0 0 0 0 0 3 1 0 1 3 2 1 0 0 0 0 0 14 0 1499.7872 Q53H80 Q53H80 10 23 AKIRIN2 Akirin-2 yes yes 2 4.7027E-08 106.42 By MS/MS By MS/MS 1 1 4475700 2397400 0 2078300 3100 1479 3284 9677;9678 6776;6777 6777 1985;1986 2 TLDFDPLLSPASPKR ACGATLKRTLDFDPLL LSPASPKRRRCAPLSA R T L K R R 1 1 0 2 0 0 0 0 0 0 3 1 0 1 3 2 1 0 0 0 0 0 15 1 1655.8883 Q53H80 Q53H80 10 24 AKIRIN2 Akirin-2 yes yes 2 0.004362 64.476 By MS/MS By matching By matching 1 1 1 834700 310670 236070 287960 3101 1479 3285 9679;9680;9681 6778 6778 1985;1986 1 TLEDSSGTVLHR ________________ SSGTVLHRLIQEQLRY R T L H R L 0 1 0 1 0 0 1 1 1 0 2 0 0 0 0 2 2 0 0 1 0 0 12 0 1313.6575 D6RFG0;D6RIC7;D6RBK2;D6RJA4;D6RF61;D6RCL7;Q9Y2J4 D6RFG0 3 14 AMOTL2 Angiomotin-like protein 2 yes no 2 0.013147 44.203 By MS/MS 1 2450000 0 2450000 0 3102 490 3286 9682 6779 6779 3037;3038 1 TLEPVKPPTVPNDYMTSPAR LGRNTPYKTLEPVKPP DYMTSPARLGSQHSPG K T L A R L 1 1 1 1 0 0 1 0 0 0 1 1 1 0 5 1 3 0 1 2 0 0 20 1 2212.1198 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 200 219 ABI1 Abl interactor 1 yes no 3 0.00012207 64.52 By MS/MS By matching 2 1 2485600 0 1100800 1384900 3103 141 3287;3288 9683;9684;9685 6780;6781 6781 12 192;2917 2 TLFLGVTNLQAK DALTGMVKTLFLGVTN GVTNLQAKHVEMTSLC K T L A K H 1 0 1 0 0 1 0 1 0 0 3 1 0 1 0 0 2 0 0 1 0 0 12 0 1303.75 Q05707;J3QT83 Q05707 917 928 COL14A1 Collagen alpha-1(XIV) chain yes no 2 0.0031289 78.655 By MS/MS By matching By matching 1 1 1 1521300 977420 275570 268330 3104 1346 3289 9686;9687;9688 6782 6782 1 TLHCEGTEINSDDEQESK PFKTKKIKTLHCEGTE SDDEQESKEVEETATA K T L S K E 0 0 1 2 1 1 4 1 1 1 1 1 0 0 0 2 2 0 0 0 0 0 18 0 2090.8699 Q9BPX3;H0Y9Z8 Q9BPX3 664 681 NCAPG Condensin complex subunit 3 yes no 2;3 0.001004 66.448 By MS/MS By MS/MS By MS/MS 2 2 2 45518000 14309000 18009000 13199000 3105 1773 3290 9689;9690;9691;9692;9693;9694 6783;6784;6785;6786 6783 2460;2461 4 TLLSESSSQSSKSPSLSSK LDSLGRKKTLLSESSS KSPSLSSKQQHQPSAS K T L S K Q 0 0 0 0 0 1 1 0 0 0 3 2 0 0 1 10 1 0 0 0 0 0 19 1 1938.9746 Q9UPU5 Q9UPU5 1129 1147 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 3 0.0054371 53.255 By matching By MS/MS 1 1 3277400 2076800 0 1200700 3106 1941 3291 9695;9696 6787 6787 2745;2746 1 TLNAETPKSSPLPAK LLDEEVSRTLNAETPK KSSPLPAKGRDPVEIL R T L A K G 2 0 1 0 0 0 1 0 0 0 2 2 0 0 3 2 2 0 0 0 0 0 15 1 1552.8461 Q7L2J0 Q7L2J0 208 222 MEPCE 7SK snRNA methylphosphate capping enzyme yes yes 2;3 4.7245E-20 130.47 By MS/MS By MS/MS By MS/MS 3 3 3 23416000 7650900 8907600 6857900 3107 1572 3292;3293 9697;9698;9699;9700;9701;9702;9703;9704;9705 6788;6789;6790;6791;6792;6793 6788 2138;2139;3439 6 TLNMTTSPEEK TPRKRISKTLNMTTSP MTTSPEEKRKIIGDTF K T L E K R 0 0 1 0 0 0 2 0 0 0 1 1 1 0 1 1 3 0 0 0 0 0 11 0 1249.586 P49915 P49915 326 336 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 1.0137E-05 117.03 By MS/MS By MS/MS 1 1 7543600 3803600 0 3740000 3108 1264 3294 9706;9707 6794;6795 6794 1672;3333 2 TLNMTTSPEEKR TPRKRISKTLNMTTSP TTSPEEKRKIIGDTFV K T L K R K 0 1 1 0 0 0 2 0 0 0 1 1 1 0 1 1 3 0 0 0 0 0 12 1 1405.6871 P49915 P49915 326 337 GMPS GMP synthase [glutamine-hydrolyzing] yes yes 2 0.0019202 84.173 By MS/MS By matching By matching 1 1 1 2891900 1110600 925320 856000 3109 1264 3295 9708;9709;9710 6796 6796 1672;3333 1 TLNNDIMLIK RHPQYDRKTLNNDIML NNDIMLIKLSSRAVIN K T L I K L 0 0 2 1 0 0 0 0 0 2 2 1 1 0 0 0 1 0 0 0 0 0 10 0 1173.6427 H0Y8D1;A6XGL3;CON__P07477;A0A087WW55;E7EQ64;P07477 H0Y8D1 53 62 PRSS1 Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2 yes no 2 0.00066571 111.95 By MS/MS By MS/MS By MS/MS 1 3 1 31257000 5841900 23150000 2265900 + 3110 58 3296;3297;3298 9711;9712;9713;9714;9715 6797;6798;6799;6800 6798 4 3 TLNQPDSQLQLTTGNGLFLSEGLK EGFQELLRTLNQPDSQ LFLSEGLKLVDKFLED R T L L K L 0 0 2 1 0 3 1 3 0 0 6 1 0 1 1 2 3 0 0 0 0 0 24 0 2573.3337 P01009;A0A0G2JRN3;A0A024R6I7;G3V2B9;G3V544 P01009 126 149 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2;3 7.3797E-07 79.346 By MS/MS By MS/MS By matching 2 2 2 19189000 8778000 5389500 5021900 3111 1085 3299;3300 9716;9717;9718;9719;9720;9721 6801;6802;6803 6801 55 3 TLQGSNTQQKPASNQR PIAQPESKTLQGSNTQ QKPASNQRPLTQQETP K T L Q R P 1 1 2 0 0 4 0 1 0 0 1 1 0 0 1 2 2 0 0 0 0 0 16 1 1756.8816 Q05469 Q05469 41 56 LIPE Hormone-sensitive lipase yes yes 2 0.014644 46.926 By MS/MS 1 0 0 0 0 3112 1343 3301 9722 6804 6804 1759 1 TLQKINESR LKEIETQKTLQKINES LQKINESRSWFFERIN K T L S R S 0 1 1 0 0 1 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 9 1 1087.5986 O00370 O00370 355 363 LINE-1 retrotransposable element ORF2 protein;Reverse transcriptase;Endonuclease yes yes 2 0.0078953 80.916 By matching By MS/MS By MS/MS 1 2 1 7773300 1336900 3793400 2642900 3113 975 3302 9723;9724;9725;9726 6805;6806 6806 52 1289 2 TLSADASVNTLPVVVSR IIGPSKERTLSADASV TLPVVVSREPSVPASC R T L S R E 2 1 1 1 0 0 0 0 0 0 2 0 0 0 1 3 2 0 0 4 0 0 17 0 1727.9418 H0Y641;H0Y4V9;Q92615 H0Y641 42 58 LARP4B La-related protein 4B yes no 2 0.0023158 59.634 By MS/MS By matching By MS/MS 1 1 1 2436600 923010 657890 855660 3114 754 3303 9727;9728;9729 6807;6808 6808 1031 2 TLSASAAEVAPR EGLRLKERTLSASAAE SAAEVAPRAVSVGSQP R T L P R A 4 1 0 0 0 0 1 0 0 0 1 0 0 0 1 2 1 0 0 1 0 0 12 0 1171.6197 Q16825 Q16825 656 667 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 yes yes 2 0.018727 50.353 By matching By MS/MS By matching 1 1 1 1405400 540760 479260 385420 3115 1458 3304 9730;9731;9732 6809 6809 1956 1 TLSASTQDLSPH WHLDKAPRTLSASTQD STQDLSPH________ R T L P H - 1 0 0 1 0 1 0 0 1 0 2 0 0 0 1 3 2 0 0 0 0 0 12 0 1255.6044 Q6P597 Q6P597 493 504 KLC3 Kinesin light chain 3 yes yes 2 0.0005409 87.641 By MS/MS By MS/MS 2 2 2684900 0 1366400 1318500 3116 1549 3305 9733;9734;9735;9736 6810;6811 6810 2109 2 TLSDESICSNR SPRRSLYRTLSDESIC DESICSNRRGSSFGSS R T L N R R 0 1 1 1 1 0 1 0 0 1 1 0 0 0 0 3 1 0 0 0 0 0 11 0 1280.5667 Q9P2F8 Q9P2F8 1486 1496 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 yes yes 2 0.0021968 78.903 By matching By MS/MS By MS/MS 1 1 1 2409000 862150 898950 647850 3117 1895 3306 9737;9738;9739 6812;6813 6812 2673 2 TLSDESIYNSQR TSRRALHRTLSDESIY ESIYNSQREHFFTSRA R T L Q R E 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 3 1 0 1 0 0 0 12 0 1411.6579 O43166;F5GYF8 O43166 1583 1594 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 yes no 2 0.00091338 85.536 By MS/MS By MS/MS By MS/MS 1 1 1 4273000 1620700 1501400 1151000 3118 1001 3307 9740;9741;9742 6814;6815;6816 6815 1334 3 TLSEVDYAPAGPAR CSVLQMAKTLSEVDYA YAPAGPARSALLPGPL K T L A R S 3 1 0 1 0 0 1 1 0 0 1 0 0 0 2 1 1 0 1 1 0 0 14 0 1445.7151 A0A0A0MTP6;O15357;H0YFZ4 A0A0A0MTP6 1063 1076 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 2 0.0014504 76.332 By matching By MS/MS By MS/MS 1 1 1 19703000 6163500 7343600 6196200 3119 168 3308 9743;9744;9745 6817;6818 6817 3593 2 TLSMDKGF ELEHVTRRTLSMDKGF TLSMDKGF________ R T L G F - 0 0 0 1 0 0 0 1 0 0 1 1 1 1 0 1 1 0 0 0 0 0 8 1 897.4266 P17858 P17858 773 780 PFKL ATP-dependent 6-phosphofructokinase, liver type yes yes 1 0.0054047 61.78 By MS/MS 1 910480 0 0 910480 3120 1169 3309 9746 6819 6819 1515 1 TLSPTPSAEGYQDVR QSLGESPRTLSPTPSA AEGYQDVRDRMIHRST R T L V R D 1 1 0 1 0 1 1 1 0 0 1 0 0 0 2 2 2 0 1 1 0 0 15 0 1619.7791 J3QSX6;F8W8M4;A0A0A0MRL6;O14639;H0Y7N6;F6XFR5 J3QSX6 87 101 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.0024958 65.241 By MS/MS 1 4977200 4977200 0 0 3121 135 3310 9747 6820 6820 180 1 TLSSSAQEDIIR LRNQGVVRTLSSSAQE SAQEDIIRWFKEEQLP R T L I R W 1 1 0 1 0 1 1 0 0 2 1 0 0 0 0 3 1 0 0 0 0 0 12 0 1318.6729 Q9H788 Q9H788 313 324 SH2D4A SH2 domain-containing protein 4A yes yes 2 0.0018069 78.486 By MS/MS By MS/MS By MS/MS 1 1 1 10072000 4025300 3025800 3020400 3122 1828 3311 9748;9749;9750 6821;6822;6823 6821 2566 3 TLSSSSMDLSR GTGLSDSRTLSSSSMD SSSMDLSRRSSLVG__ R T L S R R 0 1 0 1 0 0 0 0 0 0 2 0 1 0 0 5 1 0 0 0 0 0 11 0 1182.5551 Q9H0B6 Q9H0B6 606 616 KLC2 Kinesin light chain 2 yes yes 2 1.044E-05 117.86 By MS/MS By MS/MS By MS/MS 1 1 1 8575200 2779500 3186600 2609200 3123 1809 3312 9751;9752;9753 6824;6825;6826 6825 2524 3 TLSSSTQASIEIDSLYEGIDFYTSITR TACERAKRTLSSSTQA DFYTSITRARFEELNA R T L T R A 1 1 0 2 0 1 2 1 0 4 2 0 0 1 0 6 4 0 2 0 0 0 27 0 2996.4502 E9PKE3;P11142;E9PN89;A8K7Q2;E9PNE6 E9PKE3 254 280 HSPA8 Heat shock cognate 71 kDa protein yes no 2;3 6.391E-15 65.741 By MS/MS By matching 2 2 80917000 0 47065000 33852000 3124 598 3313 9754;9755;9756;9757 6827;6828 6827 2 TLTDEVNSPDSDRR RRKKISAKTLTDEVNS NSPDSDRRDKKGGNYK K T L R R D 0 2 1 3 0 0 1 0 0 0 1 0 0 0 1 2 2 0 0 1 0 0 14 1 1603.7438 F8VXC8;Q8TAQ2 F8VXC8 276 289 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 4.1964E-05 97.2 By MS/MS By matching By MS/MS 1 1 1 17463000 5806200 5953300 5703900 3125 681 3314 9758;9759;9760 6829;6830 6829 912 2 TLTGDVKTSPPR KRSEGEEKTLTGDVKT DVKTSPPRTAPKKQL_ K T L P R T 0 1 0 1 0 0 0 1 0 0 1 1 0 0 2 1 3 0 0 1 0 0 12 1 1270.6881 H3BSX7;H3BNB8;H3BVH0;H3BRV2;H3BM79;Q9H8T0 H3BSX7 22 33 AKTIP AKT-interacting protein yes no 2 0.013196 59.796 By MS/MS By MS/MS By matching 1 1 1 2629100 1077900 797790 753320 3126 813 3315 9761;9762;9763 6831;6832 6831 1101;3176;3177 0 TLTLVDTGIGMTK IIPNPQERTLTLVDTG DTGIGMTKADLINNLG R T L T K A 0 0 0 1 0 0 0 2 0 1 2 1 1 0 0 0 4 0 0 1 0 0 13 0 1348.7272 P08238 P08238 83 95 HSP90AB1 Heat shock protein HSP 90-beta yes yes 2 0.011696 61.353 By MS/MS 1 490900 0 490900 0 3127 1126 3316 9764 6833 6833 1 TLTYFNYDQSGDFQTVTFEGPEIR VILDNGGKTLTYFNYD TFEGPEIRKIFYGSFH K T L I R K 0 1 1 2 0 2 2 2 0 1 1 0 0 3 1 1 4 0 2 1 0 0 24 0 2827.2977 Q05707;A0A0A0MQT7 Q05707 1327 1350 COL14A1 Collagen alpha-1(XIV) chain yes no 2;3 0.00014454 65.753 By MS/MS By matching By MS/MS 2 2 2 55696000 19852000 15513000 20330000 3128 1346 3317 9765;9766;9767;9768;9769;9770 6834;6835 6834 2 TLVLSNLSYSATEETLQEVFEK STWSGESKTLVLSNLS TLQEVFEKATFIKVPQ K T L E K A 1 0 1 0 0 1 4 0 0 0 4 1 0 1 0 3 3 0 1 2 0 0 22 0 2500.2585 P19338;H7BY16 P19338 487 508 NCL Nucleolin yes no 2;3 4.8885E-33 107.39 By MS/MS By MS/MS By MS/MS 2 2 2 32043000 12664000 8401300 10978000 3129 1175 3318 9771;9772;9773;9774;9775;9776 6836;6837;6838;6839;6840;6841 6836 6 TMLLLSRSPEAQPK VTGASLRRTMLLLSRS RSPEAQPKTLPLTGST R T M P K T 1 1 0 0 0 1 1 0 0 0 3 1 1 0 2 2 1 0 0 0 0 0 14 1 1569.8549 P55265 P55265 818 831 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 3 0.005691 56.139 By MS/MS By matching 1 1 1210200 0 644260 565930 3130 1298 3319 9777;9778 6842 6842 1709 1 TMSVSDFNYSR SINEIPERTMSVSDFN VSDFNYSRTSPSKRPN R T M S R T 0 1 1 1 0 0 0 0 0 0 0 0 1 1 0 3 1 0 1 1 0 0 11 0 1305.566 Q96RT1;H0YA04 Q96RT1 1156 1166 ERBB2IP Protein LAP2 yes no 2 0.0011524 96.331 By MS/MS By MS/MS By MS/MS 1 1 1 2246500 702200 778200 766080 3131 1757 3320 9779;9780;9781 6843;6844;6845 6845 2427;2428 3 TNEKVELQELNDR NTEFKNTRTNEKVELQ ELQELNDRFANYIDKV R T N D R F 0 1 2 1 0 1 3 0 0 0 2 1 0 0 0 0 1 0 0 1 0 0 13 1 1586.79 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;P17661 P08670 101 113 VIM;DES Vimentin;Desmin yes no 3 1.4753E-05 82.515 By matching By MS/MS By MS/MS 1 1 1 4948300 1945700 1775900 1226700 3132 1129 3321 9782;9783;9784 6846;6847 6846 2 TNKSPEAKPLPGK LGSVEAPKTNKSPEAK EAKPLPGKLPKGISAG K T N G K L 1 0 1 0 0 0 1 1 0 0 1 3 0 0 3 1 1 0 0 0 0 0 13 2 1365.7616 P46087;F5H359;F5GWB7;F5H709;F5H5X6 P46087 64 76 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 3 0.0047487 78.166 By MS/MS By matching By matching 1 1 1 3399900 1345500 1399600 654840 3133 1242 3322 9785;9786;9787 6848 6848 1615 1 TNLSGRQSPSFK EEKEVLLKTNLSGRQS GRQSPSFKLSLSSGTK K T N F K L 0 1 1 0 0 1 0 1 0 0 1 1 0 1 1 3 1 0 0 0 0 0 12 1 1320.6786 Q6IN85 Q6IN85 734 745 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes yes 2 0.0014 86.262 By MS/MS By matching By MS/MS 1 1 1 5810700 2305000 1714600 1791100 3134 1536 3323 9788;9789;9790 6849;6850 6849 2089 2 TNNHIGGGAFSVDSPR SSTGSLLKTNNHIGGG AFSVDSPRIYSNSLPP K T N P R I 1 1 2 1 0 0 0 3 1 1 0 0 0 1 1 2 1 0 0 1 0 0 16 0 1627.7703 Q9Y2U8 Q9Y2U8 389 404 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 0.0012993 70.802 By matching By matching By MS/MS 1 1 1 1272300 433560 439520 399210 3135 1959 3324 9791;9792;9793 6851 6851 2794 1 TNPPTQKPPSPPMSGR ARTGTLSRTNPPTQKP PSPPMSGRGTLGRNTP R T N G R G 0 1 1 0 0 1 0 1 0 0 0 1 1 0 6 2 2 0 0 0 0 0 16 1 1690.8461 B6VEX4;A0A0A0MRT6;Q8IZP0 B6VEX4 174 189 ABI1 Abl interactor 1 yes no 3 0.011521 44.44 By MS/MS 1 3158400 3158400 0 0 3136 141 3325 9794 6852 6852 2918 1 TNSMGSATGPLPGTK SKGSKRVRTNSMGSAT TGPLPGTKVEPTVLDR R T N T K V 1 0 1 0 0 0 0 3 0 0 1 1 1 0 2 2 3 0 0 0 0 0 15 0 1417.6871 O15014 O15014 465 479 ZNF609 Zinc finger protein 609 yes yes 2 0.00031113 82.259 By matching By MS/MS By MS/MS 1 1 1 2785400 733060 1070600 981700 3137 987 3326 9795;9796;9797 6853;6854 6853 1322 2 TNSMSSSGLGSPNR QGIGIPSRTNSMSSSG SGLGSPNRSSPSIICM R T N N R S 0 1 2 0 0 0 0 2 0 0 1 0 1 0 1 5 1 0 0 0 0 0 14 0 1393.6256 F8VQD8;A0A087X050;F8VVY1;F8VUB4;F8VX63;F8VP97;F8VV52;Q9NZN8 F8VQD8 70 83 CNOT2 CCR4-NOT transcription complex subunit 2 yes no 2 2.2863E-05 97.767 By MS/MS By MS/MS By matching 1 1 1 7030800 2449500 2450000 2131400 3138 93 3327 9798;9799;9800 6855;6856;6857 6856 113 3 TNSPGFQK FDKPNFNRTNSPGFQK TNSPGFQKKVQFGNEN R T N Q K K 0 0 1 0 0 1 0 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 8 0 877.42938 A0A087X0H9;Q5T8P6 A0A087X0H9 521 528 RBM26 RNA-binding protein 26 yes no 2 0.0077369 112.3 By MS/MS By MS/MS By MS/MS 2 2 2 6136500 2040100 2085200 2011300 3139 97 3328 9801;9802;9803;9804;9805;9806 6858;6859;6860;6861 6858 119 4 TNSSSSSPVVLK EKPRKRRRTNSSSSSP SSSPVVLKEVPKAVVP R T N L K E 0 0 1 0 0 0 0 0 0 0 1 1 0 0 1 5 1 0 0 2 0 0 12 0 1204.6299 E9PMC9;Q7Z589 E9PMC9 208 219 C11orf30;EMSY Protein EMSY yes no 2 0.0080609 60.157 By matching By MS/MS By MS/MS 1 1 1 3248800 1104600 1140700 1003500 3140 608 3329 9807;9808;9809 6862;6863 6862 817;818 2 TNTMNGSKSPVISR PTRKPWERTNTMNGSK SKSPVISRPKSTPLSQ R T N S R P 0 1 2 0 0 0 0 1 0 1 0 1 1 0 1 3 2 0 0 1 0 0 14 1 1490.7511 A0A0U1RRM6;Q8N8S7 A0A0U1RRM6 732 745 ENAH Protein enabled homolog yes no 2 0.0030092 68.168 By matching By MS/MS By MS/MS 1 2 2 2534700 747050 964590 823050 3141 262 3330 9810;9811;9812;9813;9814 6864;6865 6864 17 344;345;2956 2 TNTMNGSKSPVISRPK PTRKPWERTNTMNGSK SPVISRPKSTPLSQPS R T N P K S 0 1 2 0 0 0 0 1 0 1 0 2 1 0 2 3 2 0 0 1 0 0 16 2 1715.8989 A0A0U1RRM6 A0A0U1RRM6 732 747 yes yes 3 3.9124E-05 87.228 By MS/MS By MS/MS By MS/MS 5 4 4 42216000 15644000 14631000 11942000 3142 262 3331;3332;3333;3334 9815;9816;9817;9818;9819;9820;9821;9822;9823;9824;9825;9826;9827 6866;6867;6868;6869;6870;6871;6872;6873;6874 6874 17 23 344;345;2956 9 TNTPVKEDWNVR TTEVTQPRTNTPVKED VKEDWNVRITKLRKQV R T N V R I 0 1 2 1 0 0 1 0 0 0 0 1 0 0 1 0 2 1 0 2 0 0 12 1 1457.7263 P78347 P78347 556 567 GTF2I General transcription factor II-I yes yes 3 0.0010964 90.476 By matching By MS/MS By MS/MS 1 1 1 4869100 1990600 1813000 1065500 3143 1321 3335 9828;9829;9830 6875;6876 6875 3344 2 TNTVTAQVTVRPK CGDLIVLKTNTVTAQV AQVTVRPKMCILTELE K T N P K M 1 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 4 0 0 3 0 0 13 1 1413.794 Q9P1G8 Q9P1G8 25 37 WAC yes yes 2 0.011378 45.347 By MS/MS 1 389650 0 0 389650 3144 1886 3336 9831 6877 6877 3522;3523 0 TNYSHHSKSQRNK KQNPAANKTNYSHHSK HSKSQRNKDIPNMLDV K T N N K D 0 1 2 0 0 1 0 0 2 0 0 2 0 0 0 3 1 0 1 0 0 0 13 2 1585.771 Q6P444;E9PN39 Q6P444 256 268 MTFR2 Mitochondrial fission regulator 2 yes no 2 0.010586 48.112 By matching By MS/MS By matching 1 1 1 1449100 469060 626770 353250 3145 1548 3337 9832;9833;9834 6878 6878 2106;2107;3866 0 TPAAAAAMNLASPR AVNLADSRTPAAAAAM AMNLASPRTAVAPSAV R T P P R T 6 1 1 0 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 0 0 14 0 1340.6871 Q9UQ35 Q9UQ35 2261 2274 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2;3 3.2839E-36 150.51 By MS/MS By MS/MS By MS/MS 3 3 5 27222000 9106300 9991400 8124500 3146 1945 3338;3339 9835;9836;9837;9838;9839;9840;9841;9842;9843;9844;9845 6879;6880;6881;6882;6883;6884;6885;6886;6887;6888;6889;6890;6891;6892;6893;6894 6880 177 2776 16 TPDTSTYCYETAEK ETSTKTTRTPDTSTYC YCYETAEKITRTPQAS R T P E K I 1 0 0 1 1 0 2 0 0 0 0 1 0 0 1 1 4 0 2 0 0 0 14 0 1664.6876 P46821 P46821 2034 2047 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0036824 82.489 By matching By MS/MS By MS/MS 2 2 2 10858000 4033700 3749800 3074800 3147 1245 3340;3341 9846;9847;9848;9849;9850;9851 6895;6896 6896 1626;3795;3796 1 TPDTSTYCYETAEKITR ETSTKTTRTPDTSTYC ETAEKITRTPQASTYS R T P T R T 1 1 0 1 1 0 2 0 0 1 0 1 0 0 1 1 5 0 2 0 0 0 17 1 2034.9204 P46821 P46821 2034 2050 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.0015549 60.918 By MS/MS By matching By matching 1 1 1 2441100 1015200 612970 812890 3148 1245 3342 9852;9853;9854 6897 6897 1626;3795;3796 1 TPEDGDYSYEIIEK ETIGKTTKTPEDGDYS YSYEIIEKTTRTPEEG K T P E K T 0 0 0 2 0 0 3 1 0 2 0 1 0 0 1 1 1 0 2 0 0 0 14 0 1657.7359 P46821 P46821 1932 1945 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 9.8619E-06 88.681 By MS/MS By MS/MS By MS/MS 2 2 2 22970000 7814300 8137000 7018500 3149 1245 3343;3344 9855;9856;9857;9858;9859;9860 6898;6899;6900;6901 6900 1627;3797;3798 4 TPEEGGYSYDISEK EIIEKTTRTPEEGGYS YSYDISEKTTSPPEVS R T P E K T 0 0 0 1 0 0 3 2 0 1 0 1 0 0 1 2 1 0 2 0 0 0 14 0 1573.6784 P46821 P46821 1949 1962 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 1.9528E-13 126.19 By MS/MS By MS/MS By MS/MS 3 3 3 15597000 5413100 5661100 4522400 3150 1245 3345;3346 9861;9862;9863;9864;9865;9866;9867;9868;9869 6902;6903;6904;6905;6906;6907;6908 6902 1628;3799;3800 7 TPEELDDSDFETEDFDVR RKAVLMIRTPEELDDS ETEDFDVRSRTSVQTE R T P V R S 0 1 0 5 0 0 4 0 0 0 1 0 0 2 1 1 2 0 0 1 0 0 18 0 2157.8862 G3XAM7;P35221 G3XAM7 634 651 CTNNA1 Catenin alpha-1 yes no 2 1.9542E-23 114.52 By matching By MS/MS By MS/MS 1 1 2 55030000 20221000 17152000 17656000 3151 732 3347 9870;9871;9872;9873 6909;6910 6910 988 2 TPESQPDTPPGTPLVSQDEKR TLRWEETRTPESQPDT LVSQDEKRDAELPKKR R T P K R D 0 1 0 2 0 2 2 1 0 0 1 1 0 0 5 2 3 0 0 1 0 0 21 1 2278.1077 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60 A0A0D9SEV0 111 131 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase yes no 3 0.0016328 51.611 By MS/MS By matching By matching 1 1 1 4854400 1884300 1787600 1182500 3152 211 3348 9874;9875;9876 6911 6911 2937 1 TPEVTCVVVDVSHEDPEVK KDTLMISRTPEVTCVV SHEDPEVKFNWYVDGV R T P V K F 0 0 0 2 1 0 3 0 1 0 0 1 0 0 2 1 2 0 0 6 0 0 19 0 2138.0201 A0A0A0MS08;P01857;A0A0A0MS07 A0A0A0MS08 139 157 IGHG1 Ig gamma-1 chain C region yes no 3 0.0072061 57.788 By matching By MS/MS By MS/MS 1 1 1 4010500 1670600 1019100 1320800 3153 142 3349 9877;9878;9879 6912;6913 6912 1 TPLALAGSPTPK PSSPLLKKTPLALAGS LAGSPTPKNPEDKSPQ K T P P K N 2 0 0 0 0 0 0 1 0 0 2 1 0 0 3 1 2 0 0 0 0 0 12 0 1151.655 B9EGQ5;M0QXA7;O95785 B9EGQ5 170 181 WIZ Protein Wiz yes no 2 0.0069602 62.891 By MS/MS By matching By matching 1 1 1 4682300 1618300 1588300 1475700 3154 391 3350 9880;9881;9882 6914 6914 517 1 TPLTATLSK TAAYPESKTPLTATLS PLTATLSKSGNTFRPE K T P S K S 1 0 0 0 0 0 0 0 0 0 2 1 0 0 1 1 3 0 0 0 0 0 9 0 930.5386 P01876 P01876 213 221 IGHA1 Ig alpha-1 chain C region yes yes 2 0.015576 69.812 By MS/MS 1 887820 887820 0 0 3155 1091 3351 9883 6915 6915 1 TPPSTTVGSHSPPETPVLTR PKQDVVGKTPPSTTVG PETPVLTRSSAQTSAA K T P T R S 0 1 0 0 0 0 1 1 1 0 1 0 0 0 5 3 5 0 0 2 0 0 20 0 2060.0538 H7C4X9;A0A087WVZ6;Q9ULU4 H7C4X9 673 692 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.0034415 50.215 By MS/MS By MS/MS 2 2 3933800 1883000 2050800 0 3156 54 3352 9884;9885;9886;9887 6916;6917 6916 72;73 2 TPQPSSPMDQMGK GGGQPLARTPQPSSPM SPMDQMGKMRPQPYGG R T P G K M 0 0 0 1 0 2 0 1 0 0 0 1 2 0 3 2 1 0 0 0 0 0 13 0 1402.6221 O14497 O14497 377 389 ARID1A AT-rich interactive domain-containing protein 1A yes yes 2 0.013553 51.092 By matching By matching By MS/MS 1 1 1 4902400 1405300 1653700 1843300 3157 979 3353 9888;9889;9890 6918 6918 1300 1 TPQSPAPCVLLR PETAPAARTPQSPAPC PAPCVLLRAQRSLAPE R T P L R A 1 1 0 0 1 1 0 0 0 0 2 0 0 0 3 1 1 0 0 1 0 0 12 0 1337.7126 Q9Y613 Q9Y613 495 506 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 2 0.0024196 74.987 By MS/MS By MS/MS By MS/MS 1 1 1 7306500 2717400 2308100 2281000 3158 1976 3354 9891;9892;9893 6919;6920;6921 6920 2827 3 TPRTPRTPQLK SPNYRNTRTPRTPRTP TPRTPQLKDSSQTSRF R T P L K D 0 2 0 0 0 1 0 0 0 0 1 1 0 0 3 0 3 0 0 0 0 0 11 2 1293.7517 A0A0B4J210;Q6PKG0;E5RH50;H0YC33 A0A0B4J210 782 792 LARP1 La-related protein 1 yes no 3 0.0025882 80.102 By MS/MS By MS/MS 1 1 6275800 2851200 3424600 0 3159 177 3355 9894;9895 6922;6923 6923 2930;2931;2932 2 TPSPKEEDEEPESPPEKK ASKASKEKTPSPKEED PESPPEKKTSTSPPPE K T P K K T 0 0 0 1 0 0 6 0 0 0 0 3 0 0 5 2 1 0 0 0 0 0 18 2 2051.9535 Q9H1E3 Q9H1E3 202 219 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3 3.1303E-97 166.59 By MS/MS By MS/MS By MS/MS 1 1 1 143970000 68988000 49551000 25433000 3160 1813 3356 9896;9897;9898 6924;6925;6926;6927;6928;6929;6930 6930 2534 7 TPSSSPPITPPASETK SIRNWVTRTPSSSPPI TPPASETKIMSPRKAL R T P T K I 1 0 0 0 0 0 1 0 0 1 0 1 0 0 5 4 3 0 0 0 0 0 16 0 1595.8043 F5GZ90;Q9NZJ0 F5GZ90 466 481 DTL Denticleless protein homolog yes no 2 0.0078191 59.15 By MS/MS By MS/MS 1 1 3254200 0 1675400 1578800 3161 640 3357 9899;9900 6931;6932 6931 862;863;3111 2 TPSTPVACSTPAQLK PEQNEKLKTPSTPVAC CSTPAQLKRKIRKKSN K T P L K R 2 0 0 0 1 1 0 0 0 0 1 1 0 0 3 2 3 0 0 1 0 0 15 0 1556.7868 A0A0B4J211;Q6PL18 A0A0B4J211 467 481 ATAD2 ATPase family AAA domain-containing protein 2 yes no 2 0.0075208 52.527 By MS/MS By matching By matching 1 1 1 2642500 1076900 823010 742630 3162 178 3358 9901;9902;9903 6933 6933 246 1 TPTSSPASSPLVAK KPLHGVLKTPTSSPAS ASSPLVAKKPLTTTPR K T P A K K 2 0 0 0 0 0 0 0 0 0 1 1 0 0 3 4 2 0 0 1 0 0 14 0 1341.714 Q14684 Q14684 728 741 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 2.9969E-60 160.87 By MS/MS By MS/MS By MS/MS 3 2 3 53122000 19747000 16391000 16984000 3163 1418 3359;3360 9904;9905;9906;9907;9908;9909;9910;9911 6934;6935;6936;6937;6938;6939;6940;6941 6935 1891;1892;1893;3376 8 TPVQYSQQQNSPQK LYEPAKMKTPVQYSQQ QQQNSPQKHKNKDLYT K T P Q K H 0 0 1 0 0 5 0 0 0 0 0 1 0 0 2 2 1 0 1 1 0 0 14 0 1631.7903 P46013 P46013 347 360 MKI67 Antigen KI-67 yes yes 2 3.0919E-05 93.228 By matching By MS/MS By matching 1 1 1 5197400 1950500 2164800 1082200 3164 1241 3361 9912;9913;9914 6942 6942 1612 1 TPVSGSLKSPVPR ENVKGGEKTPVSGSLK SLKSPVPRSDIPEPER K T P P R S 0 1 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 2 0 0 13 1 1323.751 H7C477;H0Y7U4;A0A0C4DG98;Q8NI27 H7C477 121 133 THOC2 THO complex subunit 2 yes no 2;3 9.3589E-05 95.197 By MS/MS By matching By MS/MS 2 1 2 16062000 6229100 5044600 4787900 3165 193 3362 9915;9916;9917;9918;9919 6943;6944;6945 6945 266;267 3 TPYEAYDPIGK APPSGLERTPYEAYDP EAYDPIGKYATATRFS R T P G K Y 1 0 0 1 0 0 1 1 0 1 0 1 0 0 2 0 1 0 2 0 0 0 11 0 1252.5976 Q5W0G0;Q5W0F9;B4DN67;Q96J84 Q5W0G0 533 543 KIRREL Kin of IRRE-like protein 1 yes no 2 0.0025867 83.869 By MS/MS By MS/MS 1 1 1719800 920510 0 799270 3166 344 3363 9920;9921 6946;6947 6947 3631 2 TQDPSSPGTTPPQAR VEGTPASRTQDPSSPG GTTPPQARQAPAPTVI R T Q A R Q 1 1 0 1 0 2 0 1 0 0 0 0 0 0 4 2 3 0 0 0 0 0 15 0 1538.7325 Q13112 Q13112 424 438 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 1.2137E-18 123.63 By MS/MS By MS/MS By MS/MS 3 2 2 38123000 16806000 13079000 8237900 3167 1377 3364;3365 9922;9923;9924;9925;9926;9927;9928 6948;6949;6950;6951;6952;6953 6950 1818;1819;3361 6 TQFEDLVPSPTSEK NVDSEFARTQFEDLVP VPSPTSEKAFLAQIHA R T Q E K A 0 0 0 1 0 1 2 0 0 0 1 1 0 1 2 2 2 0 0 1 0 0 14 0 1576.7621 M0R0C4;M0QZ28;Q9Y4J8 M0R0C4 80 93 DTNA Dystrobrevin alpha yes no 2 0.0028557 67.994 By MS/MS By MS/MS By MS/MS 1 1 2 3846800 1415800 1317900 1113000 3168 963 3366 9929;9930;9931;9932 6954;6955;6956 6956 1267;1268 3 TQGAVEAAKVGALASLIR YSRTVQYRTQGAVEAA GALASLIRSVASFSIY R T Q I R S 5 1 0 0 0 1 1 2 0 1 2 1 0 0 0 1 1 0 0 2 0 0 18 1 1754.005 Q9Y646 Q9Y646 188 205 CPQ Carboxypeptidase Q yes yes 3 0.0010224 63.682 By MS/MS 1 0 0 0 0 3169 1977 3367 9933 6957 6957 143 2828;3559 1 TQLSPSIKR RSEAQRSKTQLSPSIK QLSPSIKRKREVSPPG K T Q K R K 0 1 0 0 0 1 0 0 0 1 1 1 0 0 1 2 1 0 0 0 0 0 9 1 1028.5978 Q8NFC6;H0Y9Y2 Q8NFC6 3016 3024 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 2 0.011909 75.788 By matching By MS/MS By MS/MS 1 1 1 6890400 2794400 2243500 1852500 3170 1660 3368 9934;9935;9936 6958;6959 6959 2277 2 TQMAEVLPSPR GGKAKGKKTQMAEVLP AEVLPSPRGQRVIPRI K T Q P R G 1 1 0 0 0 1 1 0 0 0 1 0 1 0 2 1 1 0 0 1 0 0 11 0 1227.6282 P11388 P11388 1205 1215 TOP2A DNA topoisomerase 2-alpha yes yes 2 1.8178E-07 136.33 By MS/MS By MS/MS By MS/MS 2 2 2 12112000 4242500 4368700 3500400 3171 1145 3369;3370 9937;9938;9939;9940;9941;9942 6960;6961;6962;6963;6964;6965;6966 6964 103 1492 7 TQMSILEQRESLPIYKLK NKASYGKKTQMSILEQ SLPIYKLKEQLVQAVH K T Q L K E 0 1 0 0 0 2 2 0 0 2 3 2 1 0 1 2 1 0 1 0 0 0 18 2 2176.1926 F5H658;Q14562 F5H658 554 571 DHX8 ATP-dependent RNA helicase DHX8 yes no 3 0.01027 41.912 By matching By matching By MS/MS 1 1 1 218890000 108460000 46041000 64387000 3172 655 3371 9943;9944;9945 6967 6967 876;3120 1 TQNKEESYDFSK KPEPPKAKTQNKEESY EESYDFSKSYEYKSNP K T Q S K S 0 0 1 1 0 1 2 0 0 0 0 2 0 1 0 2 1 0 1 0 0 0 12 1 1474.6576 A0A1B0GTW1;Q9UDY2 A0A1B0GTW1 1059 1070 TJP2 Tight junction protein ZO-2 yes no 2 0.010249 56.359 By MS/MS By MS/MS 1 1 2061900 855990 1205900 0 3173 272 3372 9946;9947 6968;6969 6969 3612 2 TQPDGTSVPGEPASPISQR SITSKLPRTQPDGTSV PASPISQRLPPKVESL R T Q Q R L 1 1 0 1 0 2 1 2 0 1 0 0 0 0 4 3 2 0 0 1 0 0 19 0 1922.9334 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1728 1746 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 0.0010455 67.136 By MS/MS By MS/MS By MS/MS 2 2 2 70689000 25715000 23817000 21157000 3174 77 3373 9948;9949;9950;9951;9952;9953 6970;6971;6972;6973;6974;6975;6976;6977 6971 95;96 8 TQQQRDNTVHSFR VDVIHAERTQQQRDNT DNTVHSFRAGKIWVLI R T Q F R A 0 2 1 1 0 3 0 0 1 0 0 0 0 1 0 1 2 0 0 1 0 0 13 1 1615.7815 Q9Y2R4 Q9Y2R4 447 459 DDX52 Probable ATP-dependent RNA helicase DDX52 yes yes 3 0.014087 47.227 By MS/MS 1 211260 211260 0 0 3175 1957 3374 9954 6978 6978 3554 0 TQQQRSGPQGIAPVPPPR WLFIREQRTQQQRSGP IAPVPPPRDLSWEAGH R T Q P R D 1 2 0 0 0 4 0 2 0 1 0 0 0 0 5 1 1 0 0 1 0 0 18 1 1913.0231 F5H366;F5H2I9;Q6J9G0 F5H366 54 71 STYK1 Tyrosine-protein kinase STYK1 yes no 2 0.017442 42.809 By MS/MS 1 0 0 0 0 3176 648 3375 9955 6979 6979 872;3114 1 TQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGR GHGSGLVRTQSEESRP QTQSTSGRRRRAANED R T Q G R R 3 2 0 0 0 6 3 1 1 0 1 0 0 0 5 7 9 0 0 0 0 0 38 1 4009.8849 B8ZZU6;E9PBF9;P15336;F5H629 B8ZZU6 189 226 ATF2 Cyclic AMP-dependent transcription factor ATF-2 yes no 4 0.00041978 43.04 By matching By MS/MS By matching 1 1 1 4330600 1430000 1878300 1022300 3177 387 3376 9956;9957;9958 6980 6980 3013;3014 1 TQSLPVTEK KKHQGVSKTQSLPVTE QSLPVTEKVTENQIPA K T Q E K V 0 0 0 0 0 1 1 0 0 0 1 1 0 0 1 1 2 0 0 1 0 0 9 0 1001.5393 Q9NQW6 Q9NQW6 483 491 ANLN Actin-binding protein anillin yes yes 2 0.018556 59.198 By MS/MS By matching By matching 1 1 1 5472100 2108300 1811500 1552300 3178 1847 3377 9959;9960;9961 6981 6981 2594 1 TQSLSALPK PLPPGKRRTQSLSALP QSLSALPKERDSSSEK R T Q P K E 1 0 0 0 0 1 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 9 0 943.53385 A0A0A0MQR4;I3L2J0;Q96RK0 A0A0A0MQR4 171 179 CIC Protein capicua homolog yes no 2 0.0075823 78.513 By MS/MS By MS/MS By matching 1 1 1 3378800 1067800 1363600 947420 3179 122 3378 9962;9963;9964 6982;6983 6982 161 2 TQSPGGCSAEAVLAR GWNSRSPRTQSPGGCS SAEAVLARKKHRRRPS R T Q A R K 3 1 0 0 1 1 1 2 0 0 1 0 0 0 1 2 1 0 0 1 0 0 15 0 1502.7147 Q96MH2;K7ESM2;K7ELS4;K7EJA3;K7ERG7 Q96MH2 74 88 HEXIM2 Protein HEXIM2 yes no 2 0.0016423 69.331 By MS/MS By MS/MS 1 1 2322000 1313000 1009000 0 3180 1748 3379 9965;9966 6984;6985 6984 2414 2 TQSSSCEDLPSTTQPK FKIVPSYRTQSSSCED LPSTTQPKGRQIYVRA R T Q P K G 0 0 0 1 1 2 1 0 0 0 1 1 0 0 2 4 3 0 0 0 0 0 16 0 1764.7836 Q5JS72 Q5JS72 188 203 CASK yes yes 2 0.0035342 56.25 By matching By MS/MS By matching 1 1 1 12703000 4245100 4896700 3561600 3181 1484 3380 9967;9968;9969 6986 6986 1991 1 TQVLSPDSLFTAK QRNASYLKTQVLSPDS PDSLFTAKFVAYNEEE K T Q A K F 1 0 0 1 0 1 0 0 0 0 2 1 0 1 1 2 2 0 0 1 0 0 13 0 1405.7453 A8MQ02;J3KN01;P55196;H0Y8L4;H0Y948 A8MQ02 1674 1686 MLLT4 Afadin yes no 2 0.012523 52.265 By matching By MS/MS By matching 1 1 1 2818500 1043600 1060100 714770 3182 316 3381 9970;9971;9972 6987 6987 424 1 TQYNQVPSEDFER SNMEGYSKTQYNQVPS VPSEDFERTPQSPTLP K T Q E R T 0 1 1 1 0 2 2 0 0 0 0 0 0 1 1 1 1 0 1 1 0 0 13 0 1611.7165 P78310 P78310 316 328 CXADR Coxsackievirus and adenovirus receptor yes yes 2 0.0080746 60.255 By matching By matching By MS/MS 1 1 1 4004400 1240900 1471300 1292200 3183 1320 3382 9973;9974;9975 6988 6988 3819 1 TRLSTASEETVQNR PPICLRRRTRLSTASE SEETVQNRVSLEKVLG R T R N R V 1 2 1 0 0 1 2 0 0 0 1 0 0 0 0 2 3 0 0 1 0 0 14 1 1590.7962 H7C3R4;O43379 H7C3R4 40 53 WDR62 WD repeat-containing protein 62 yes no 3 4.3055E-05 100.27 By MS/MS By MS/MS By MS/MS 1 1 1 4379600 2252600 1348100 778910 3184 872 3383 9976;9977;9978 6989;6990;6991 6991 1169;1170;3193;3194 3 TRPGSFQSLSDALSDTPAK LSSFFRGRTRPGSFQS ALSDTPAKSYAPELGR R T R A K S 2 1 0 2 0 1 0 1 0 0 2 1 0 1 2 4 2 0 0 0 0 0 19 1 1976.9803 G3V4K3;Q9H9C1 G3V4K3 143 161 VIPAS39 Spermatogenesis-defective protein 39 homolog yes no 3 0.015135 43.956 By MS/MS By matching By matching 1 1 1 2332000 1135100 493400 703550 3185 721 3384 9979;9980;9981 6992 6992 973 1 TRSNPEGAEDR HSAEPRPRTRSNPEGA NPEGAEDRAVGAQASP R T R D R A 1 2 1 1 0 0 2 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 11 1 1230.5589 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;M0R2I2;J3KQS6;Q9NWV8 M0R3H9 27 37 BABAM1 BRISC and BRCA1-A complex member 1 yes no 2 0.0019156 88.224 By MS/MS By MS/MS By matching 1 1 1 14346000 4608700 5020200 4716600 3186 911 3385 9982;9983;9984 6993;6994 6994 1223 2 TSAAACAVTDLSDDSDFDEKAK PKPKSVSKTSAAACAV SDFDEKAKLKYYKEIE K T S A K L 5 0 0 5 1 0 1 0 0 0 1 2 0 1 0 3 2 0 0 1 0 0 22 1 2316.0064 Q9NQZ2 Q9NQZ2 354 375 UTP3 Something about silencing protein 10 yes yes 3 0.0065929 44.788 By MS/MS 1 1940900 1940900 0 0 3187 1848 3386 9985 6995 6995 2595;2596;3509 1 TSAVSSPLLDQQR SASKKDRKTSAVSSPL SPLLDQQRNSKTNQSK K T S Q R N 1 1 0 1 0 2 0 0 0 0 2 0 0 0 1 3 1 0 0 1 0 0 13 0 1400.726 Q5T200;A0A087WX14 Q5T200 237 249 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 1.2854E-05 103.75 By MS/MS By MS/MS By matching 1 1 1 9353300 3132900 3344700 2875700 3188 1501 3387 9986;9987;9988 6996;6997 6997 2022;2023 2 TSDVGGYYYEK ESYEKTTRTSDVGGYY VGGYYYEKIERTTKSP R T S E K I 0 0 0 1 0 0 1 2 0 0 0 1 0 0 0 1 1 0 3 1 0 0 11 0 1280.5561 P46821 P46821 1898 1908 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0060486 68.557 By matching By matching By MS/MS 1 1 1 3634700 1070700 1561100 1002900 3189 1245 3388 9989;9990;9991 6998 6998 3801;3802 1 TSDVGGYYYEKIER ESYEKTTRTSDVGGYY YYYEKIERTTKSPSDS R T S E R T 0 1 0 1 0 0 2 2 0 1 0 1 0 0 0 1 1 0 3 1 0 0 14 1 1678.7839 P46821 P46821 1898 1911 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.013824 46.592 By matching By MS/MS By matching 1 1 1 4012100 1394300 1395900 1221900 3190 1245 3389 9992;9993;9994 6999 6999 3801;3802 0 TSIGQQGYGSSPK T S P K 0 0 0 0 0 2 0 3 0 1 0 1 0 0 1 3 1 0 1 0 0 0 13 0 1308.631 REV__Q6ZRR7 yes yes 2 0.016543 70.089 By MS/MS 1 6528700 0 0 6528700 + 3191 2008 3390 9995 7000 7000 3568 1 TSLDIEEYSDTEVQK ________________ YSDTEVQKNQVLTLEE R T S Q K N 0 0 0 2 0 1 3 0 0 1 1 1 0 0 0 2 2 0 1 1 0 0 15 0 1755.8051 P51580 P51580 6 20 TPMT Thiopurine S-methyltransferase yes yes 2 6.4638E-05 85.45 By MS/MS By matching By MS/MS 1 1 1 6841500 2234900 2292900 2313700 3192 1276 3391 9996;9997;9998 7001;7002 7001 1682;3337 2 TSLEASMEASPK AMVKASPKTSLEASME ASMEASPKAKARDAPK K T S P K A 2 0 0 0 0 0 2 0 0 0 1 1 1 0 1 3 1 0 0 0 0 0 12 0 1249.586 A0A0A0MRP0;Q8IWC1 A0A0A0MRP0 411 422 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.00034326 96.756 By MS/MS By MS/MS By MS/MS 1 1 1 2446900 753110 926370 767440 3193 139 3392 9999;10000;10001 7003;7004;7005 7004 190 3 TSLMSAESPTPR EEEVCDERTSLMSAES SAESPTPRSCQEGRQG R T S P R S 1 1 0 0 0 0 1 0 0 0 1 0 1 0 2 3 2 0 0 0 0 0 12 0 1275.6129 E5RHT1;B1AP22;P49810 E5RHT1 18 29 PSEN2 Presenilin;Presenilin-2;Presenilin-2 NTF subunit;Presenilin-2 CTF subunit yes no 2 2.8843E-05 106.29 By MS/MS By MS/MS By MS/MS 1 1 1 3644500 1103200 1356600 1184600 3194 331 3393 10002;10003;10004 7006;7007;7008 7008 459;460 2 TSLPLSPVK DYFPSPSKTSLPLSPV SLPLSPVKTAPLFSND K T S V K T 0 0 0 0 0 0 0 0 0 0 2 1 0 0 2 2 1 0 0 1 0 0 9 0 940.55933 Q86XL3 Q86XL3 263 271 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes yes 2 0.0022153 98.156 By MS/MS By MS/MS By MS/MS 1 1 1 3209700 1185100 1062900 961650 3195 1601 3394 10005;10006;10007 7009;7010;7011 7010 2186 3 TSMGGTQQQFVEGVR AHQDTQRRTSMGGTQQ QQFVEGVRMEEIVEGC R T S V R M 0 1 0 0 0 3 1 3 0 0 0 0 1 1 0 1 2 0 0 2 0 0 15 0 1623.7675 B4DGU4;P35222 B4DGU4 544 558 CTNNB1 Catenin beta-1 yes no 2 0.018048 58.83 By matching By matching By MS/MS 1 1 1 3495400 1251900 1188900 1054600 3196 343 3395 10008;10009;10010 7012 7012 472;2995 1 TSPLKDNPSPEPQLDDIKR TKPPVGPKTSPLKDNP PQLDDIKRELRAEVDI K T S K R E 0 1 1 3 0 1 1 0 0 1 2 2 0 0 4 2 1 0 0 0 0 0 19 2 2149.1015 Q96JC9 Q96JC9 157 175 EAF1 ELL-associated factor 1 yes yes 3 0.0030731 69.111 By MS/MS By matching By matching 1 1 1 6878800 2813100 2612800 1452900 3197 1742 3396 10011;10012;10013 7013 7013 2393;3480 1 TSQVGAASAPAKESPR LQAKASGKTSQVGAAS APAKESPRKGAAPAPP K T S P R K 4 1 0 0 0 1 1 1 0 0 0 1 0 0 2 3 1 0 0 1 0 0 16 1 1555.7954 J3KQ96;E7ETY2;Q13428 J3KQ96 368 383 TCOF1 Treacle protein yes no 2;3 1.6148E-07 94.188 By MS/MS By MS/MS By MS/MS 2 2 2 162360000 61498000 56059000 44799000 3198 545 3397 10014;10015;10016;10017;10018;10019 7014;7015;7016;7017;7018;7019 7015 705 6 TSQVGAASAPAKESPRK LQAKASGKTSQVGAAS PAKESPRKGAAPAPPG K T S R K G 4 1 0 0 0 1 1 1 0 0 0 2 0 0 2 3 1 0 0 1 0 0 17 2 1683.8904 J3KQ96;E7ETY2;Q13428 J3KQ96 368 384 TCOF1 Treacle protein yes no 3 2.4731E-10 94.532 By MS/MS By MS/MS By MS/MS 1 1 1 7298500 2479900 3407000 1411600 3199 545 3398 10020;10021;10022 7020;7021;7022 7020 705 2 TSSAELSTSAPDEPLLQK LTGVSTIRTSSAELST PDEPLLQKSPSESFIG R T S Q K S 2 0 0 1 0 1 2 0 0 0 3 1 0 0 2 4 2 0 0 0 0 0 18 0 1872.9317 Q15139 Q15139 217 234 PRKD1 Serine/threonine-protein kinase D1 yes yes 2 0.0018158 69.03 By MS/MS By matching 1 1 3695800 1898500 0 1797200 3200 1434 3399 10023;10024 7023 7023 1923 1 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK PGGSGRARTSSFAEPG PGGTGGGKASVGAMGG R T S G K A 2 0 0 0 0 0 1 18 0 0 0 1 0 1 3 4 2 0 0 0 0 0 32 0 2432.0589 P49840 P49840 19 50 GSK3A Glycogen synthase kinase-3 alpha yes yes 3 7.3852E-09 56.612 By MS/MS By matching By MS/MS 1 1 1 11663000 4241500 3999800 3421900 3201 1263 3400 10025;10026;10027 7024;7025 7024 1671 2 TSSFTEQLDEGTPNR TPTRMRSRTSSFTEQL LDEGTPNRENASTHAS R T S N R E 0 1 1 1 0 1 2 1 0 0 1 0 0 1 1 2 3 0 0 0 0 0 15 0 1680.7591 E7EVX2;Q86W71;C9J0Y3;C9JHJ5;Q13439 E7EVX2 39 53 GOLGA4 Golgin subfamily A member 4 no no 2 2.229E-06 92.247 By MS/MS By MS/MS By MS/MS 1 1 1 9908800 3205300 4079200 2624300 3202 553;1390 3401 10028;10029;10030 7026;7027;7028 7026 734;735;3074;3075 3 TSSGDPPSPLVK GIARTPMKTSSGDPPS DPPSPLVKQLSEVFET K T S V K Q 0 0 0 1 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 1 0 0 12 0 1183.6085 F5GX58;F8WDL1;Q99618 F5GX58 80 91 CDCA3 Cell division cycle-associated protein 3 yes no 2 0.0091832 58.116 By matching By MS/MS By MS/MS 1 1 1 2539700 813740 1037400 688560 3203 638 3402 10031;10032;10033 7029;7030;7031 7031 856 3 TSSGTSLSAMHSSGSSGK SKASSLHRTSSGTSLS HSSGSSGKGAGPLRGK R T S G K G 1 0 0 0 0 0 0 3 1 0 1 1 1 0 0 8 2 0 0 0 0 0 18 0 1667.7421 Q12888;A6NNK5;M0R142 Q12888 1315 1332 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.014007 45.891 By matching By MS/MS By matching 1 1 1 5064500 2057400 1718200 1288900 3204 1367 3403 10034;10035;10036 7032 7032 1806 1 TSSTDEVLSLEEK ELKAPRARTSSTDEVL EVLSLEEKDLRDRERR R T S E K D 0 0 0 1 0 0 3 0 0 0 2 1 0 0 0 3 2 0 0 1 0 0 13 0 1436.6882 K7EMM4;K7ENH8;A0A0A0MRB7 K7EMM4 97 109 TCF3 yes no 2 0.0071903 60.255 By matching By MS/MS By MS/MS 1 1 1 2472600 775860 824730 871970 3205 130 3404 10037;10038;10039 7033;7034 7033 174 2 TSSVVTLEVAK RAAELMTRTSSVVTLE VVTLEVAKQGAIYHGL R T S A K Q 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 2 2 0 0 3 0 0 11 0 1132.634 A8MQ02;J3KN01;P55196;Q5TIG5 A8MQ02 1040 1050 MLLT4 Afadin yes no 2 0.0014971 97.779 By MS/MS By matching By MS/MS 1 1 1 11663000 4477700 4327700 2857700 3206 316 3405 10040;10041;10042 7035;7036 7035 425 2 TSTSFRR SHQQCPGKTSTSFRRN KTSTSFRRNFSSPLLV K T S R R N 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 2 2 0 0 0 0 0 7 1 853.44061 Q6ZMT1 Q6ZMT1 165 171 STAC2 SH3 and cysteine-rich domain-containing protein 2 yes yes 2 0.018264 44.98 By MS/MS 1 0 0 0 0 3207 1563 3406 10043 7037 7037 2122;2123;3434 1 TSVSQNVIPSSAQK PSVLLDAKTSVSQNVI VIPSSAQKRETYTFEN K T S Q K R 1 0 1 0 0 2 0 0 0 1 0 1 0 0 1 4 1 0 0 2 0 0 14 0 1444.7522 H0Y8J2;Q03188 H0Y8J2 74 87 CENPC Centromere protein C yes no 2 0.017107 47.545 By MS/MS By matching By matching 1 1 1 1840400 599930 664940 575500 3208 771 3407 10044;10045;10046 7038 7038 1054 1 TTAPTEGKSPLKK AERDRKHRTTAPTEGK EGKSPLKKEDRSDGSA R T T K K E 1 0 0 0 0 0 1 1 0 0 1 3 0 0 2 1 3 0 0 0 0 0 13 2 1356.7613 A0A087WWP4;Q96T37 A0A087WWP4 689 701 RBM15 Putative RNA-binding protein 15 yes no 3 0.0052229 77.24 By MS/MS 1 2409200 0 2409200 0 3209 65 3408 10047 7039 7039 85 1 TTHSPYEER SLSSDRGRTTHSPYEE THSPYEERSRTKGSGQ R T T E R S 0 1 0 0 0 0 2 0 1 0 0 0 0 0 1 1 2 0 1 0 0 0 9 0 1118.4993 Q8NDT2 Q8NDT2 606 614 RBM15B Putative RNA-binding protein 15B yes yes 2 0.018517 59.265 By MS/MS By matching By matching 1 1 1 2050900 621010 599100 830810 3210 1655 3409 10048;10049;10050 7040 7040 2267 1 TTIFSPEGR MSRRYDSRTTIFSPEG TIFSPEGRLYQVEYAM R T T G R L 0 1 0 0 0 0 1 1 0 1 0 0 0 1 1 1 2 0 0 0 0 0 9 0 1006.5084 H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YL69;P25789 H0YLS6 9 17 PSMA4 Proteasome subunit alpha type;Proteasome subunit alpha type-4 yes no 2 0.01525 63.32 By matching By MS/MS By matching 1 1 1 2130900 816210 718980 595670 3211 800 3410 10051;10052;10053 7041 7041 1089 1 TTKTPEDGDYSYEIIEK YSYETIGKTTKTPEDG YSYEIIEKTTRTPEEG K T T E K T 0 0 0 2 0 0 3 1 0 2 0 2 0 0 1 1 3 0 2 0 0 0 17 1 1987.9262 P46821 P46821 1929 1945 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 3 0.010356 50.376 By MS/MS By matching 1 1 743800 447930 0 295860 3212 1245 3411 10054;10055 7042 7042 1627;3797;3798 0 TTLRSASPHR KTESSGERTTLRSASP LRSASPHRNAYRTEFQ R T T H R N 1 2 0 0 0 0 0 0 1 0 1 0 0 0 1 2 2 0 0 0 0 0 10 1 1124.6051 C9J3G5;C9J730;Q9ULJ8 C9J3G5 11 20 PPP1R9A Neurabin-1 yes no 3 0.01818 60.064 By MS/MS By matching 1 1 460610 0 185350 275250 3213 410 3412 10056;10057 7043 7043 547 0 TTNSSLEEIMDK SKDQGLQKTTNSSLEE SLEEIMDKAYDKFDVE K T T D K A 0 0 1 1 0 0 2 0 0 1 1 1 1 0 0 2 2 0 0 0 0 0 12 0 1366.6286 Q709C8 Q709C8 733 744 VPS13C Vacuolar protein sorting-associated protein 13C yes yes 2 0.0097383 57.106 By MS/MS By matching By matching 1 1 1 1414500 589710 471460 353370 3214 1567 3413 10058;10059;10060 7044 7044 2127 1 TTQELGKNQSASSTGALQKK SSTKKESRTTQELGKN STGALQKKASKISSFL R T T K K A 2 0 1 0 0 3 1 2 0 0 2 3 0 0 0 3 3 0 0 0 0 0 20 2 2076.0811 Q8TC56 Q8TC56 511 530 FAM71B Protein FAM71B yes yes 3 0.018086 42.059 By MS/MS 1 0 0 0 0 3215 1668 3414 10061 7045 7045 2288;2289 1 TTQRQLSKLWK NRTISALKTTQRQLSK RQLSKLWKEELLQDVC K T T W K E 0 1 0 0 0 2 0 0 0 0 2 2 0 0 0 1 2 1 0 0 0 0 11 2 1387.7936 P47989 P47989 469 479 XDH Xanthine dehydrogenase/oxidase;Xanthine dehydrogenase;Xanthine oxidase yes yes 3 0.016195 40.477 By MS/MS 1 0 0 0 0 3216 1249 3415 10062 7046 7046 1635;3322;3323 1 TTSAGTGGMWR CGTRSAGRTTSAGTGG AGTGGMWRFYTEDSPG R T T W R F 1 1 0 0 0 0 0 3 0 0 0 0 1 0 0 1 3 1 0 0 0 0 11 0 1123.508 P60468 P60468 47 57 SEC61B Protein transport protein Sec61 subunit beta yes yes 2 0.0064687 66.267 By MS/MS By MS/MS By MS/MS 1 1 1 5257800 1933200 1812100 1512400 3217 1304 3416 10063;10064;10065 7047;7048;7049 7047 1717 3 TTSISPALAR IPPKVPQRTTSISPAL SISPALARKNSPGNGS R T T A R K 2 1 0 0 0 0 0 0 0 1 1 0 0 0 1 2 2 0 0 0 0 0 10 0 1015.5662 Q9UKE5 Q9UKE5 676 685 TNIK TRAF2 and NCK-interacting protein kinase yes yes 2 0.0036938 77.062 By MS/MS By MS/MS By MS/MS 2 2 2 18001000 6205100 6876900 4918900 3218 1914 3417;3418 10066;10067;10068;10069;10070;10071 7050;7051;7052;7053;7054;7055;7056 7050 2701;2702 7 TTSNFSGKGYIIQK QKAEDYMKTTSNFSGK GKGYIIQKREIKPSLE K T T Q K R 0 0 1 0 0 1 0 2 0 2 0 2 0 1 0 2 2 0 1 0 0 0 14 1 1542.8042 G3V5V3;O60524 G3V5V3 196 209 NEMF Nuclear export mediator factor NEMF yes no 2 0.01443 45.598 By MS/MS 1 0 0 0 0 3219 728 3419 10072 7057 7057 981;982;3148;3149;3700 1 TTVTMSMHLLPK SDPRRGRRTTVTMSMH MSMHLLPKA_______ R T T P K A 0 0 0 0 0 0 0 0 1 0 2 1 2 0 1 1 3 0 0 1 0 0 12 0 1357.7098 A0A0G2JMC3;W4VSQ5 A0A0G2JMC3 98 109 LAIR1 yes no 2 0.015739 42.475 By matching By matching By MS/MS 1 1 1 5266800 1451500 1461800 2353600 3220 225 3420 10073;10074;10075 7058 7058 2939;2940 1 TVALNAPSRSRPTHGSYNK HVQRDAVRTVALNAPS PTHGSYNKVHANREPK R T V N K V 2 2 2 0 0 0 0 1 1 0 1 1 0 0 2 3 2 0 1 1 0 0 19 2 2055.061 F8VSD7;Q8NA57 F8VSD7 305 323 C12orf50 Uncharacterized protein C12orf50 yes no 2 0.017437 40.577 By MS/MS 1 0 0 0 0 3221 669 3421 10076 7059 7059 895;896;3691 1 TVANLLSGKSPR MPHPATGKTVANLLSG LLSGKSPRKSAEPSAN K T V P R K 1 1 1 0 0 0 0 1 0 0 2 1 0 0 1 2 1 0 0 1 0 0 12 1 1241.7092 J3KQ96;E7ETY2;Q13428 J3KQ96 147 158 TCOF1 Treacle protein yes no 2;3 0.00079673 95.236 By MS/MS By MS/MS By MS/MS 2 2 2 81364000 27930000 28954000 24480000 3222 545 3422 10077;10078;10079;10080;10081;10082 7060;7061;7062;7063;7064;7065 7064 714;715 6 TVDLDPGTLYVHSV PSRKSRAKTVDLDPGT GTLYVHSV________ K T V S V - 0 0 0 2 0 0 0 1 1 0 2 0 0 0 1 1 2 0 1 3 0 0 14 0 1514.7617 Q8WY07 Q8WY07 606 619 SLC7A3 Cationic amino acid transporter 3 yes yes 2 0.0019094 71.349 By MS/MS By matching 1 1 9939200 4852200 5087000 0 3223 1690 3423 10083;10084 7066 7066 3884 1 TVDLGISDLEDDC TTGKRTIKTVDLGISD ISDLEDDC________ K T V D C - 0 0 0 4 1 0 1 1 0 1 2 0 0 0 0 1 1 0 0 1 0 0 13 0 1450.6134 F5H5U2;Q8NHQ9 F5H5U2 557 569 DDX55 ATP-dependent RNA helicase DDX55 yes no 2 0.0065328 61.691 By MS/MS By MS/MS 1 1 7130700 0 3427900 3702900 3224 654 3424 10085;10086 7067;7068 7068 875 2 TVFSPTLPAAR NDQGARRKTVFSPTLP SPTLPAARSSLGSLQT K T V A R S 2 1 0 0 0 0 0 0 0 0 1 0 0 1 2 1 2 0 0 1 0 0 11 0 1158.6397 C9J6P4;Q7Z2W4 C9J6P4 375 385 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.010787 56.916 By matching By MS/MS By matching 1 1 1 6087300 2083100 1880700 2123500 3225 418 3425 10087;10088;10089 7069 7069 558 1 TVHRSPLLLGAQR VPTASDSRTVHRSPLL PLLLGAQRRAVANGGT R T V Q R R 1 2 0 0 0 1 0 1 1 0 3 0 0 0 1 1 1 0 0 1 0 0 13 1 1446.8419 Q96DR7 Q96DR7 76 88 ARHGEF26 Rho guanine nucleotide exchange factor 26 yes yes 3 0.015266 48.823 By MS/MS 1 525110 525110 0 0 3226 1729 3426 10090 7070 7070 2373 1 TVIIEQSWGSPK VTMGPKGRTVIIEQSW EQSWGSPKVTKDGVTV R T V P K V 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 2 1 1 0 1 0 0 12 0 1343.7085 P10809;C9JL25;E7EXB4;E7ESH4;C9JL19;C9JCQ4 P10809 61 72 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2 0.0009101 85.554 By MS/MS By MS/MS By MS/MS 2 2 1 9975700 3799700 3667200 2508900 3227 1140 3427;3428 10091;10092;10093;10094;10095 7071;7072;7073;7074;7075 7073 1483;1484 5 TVLIMELINNVAK FGGAGVGKTVLIMELI ELINNVAKAHGGYSVF K T V A K A 1 0 2 0 0 0 1 0 0 2 2 1 1 0 0 0 1 0 0 2 0 0 13 0 1456.8323 P06576;F8W079;H0YH81;F8W0P7;H0YI37 P06576 213 225 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 0.00037627 85.377 By MS/MS By MS/MS By matching 1 3 3 3439000 175870 1695200 1567900 3228 1112 3429;3430;3431 10096;10097;10098;10099;10100;10101;10102 7076;7077;7078 7078 64 86 3 TVMDGGLESDGPNMTENGLEDESRPQR RRRTDEDRTVMDGGLE EDESRPQRRNRSRRRR R T V Q R R 0 2 2 3 0 1 4 4 0 0 2 0 2 0 2 2 2 0 0 1 0 0 27 1 2933.2767 P51116 P51116 558 584 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 0.0019337 47.058 By MS/MS By matching 1 1 1745200 951280 0 793940 3229 1274 3432 10103;10104 7079 7079 123;124 1680 1 TVPSTPTLVVPHR HFFDDEDRTVPSTPTL PTLVVPHRTDGFAEAI R T V H R T 0 1 0 0 0 0 0 0 1 0 1 0 0 0 3 1 3 0 0 3 0 0 13 0 1402.7932 P12270 P12270 2133 2145 TPR Nucleoprotein TPR yes yes 3 0.0033114 61.48 By matching By MS/MS By matching 1 1 1 1222600 153360 478060 591200 3230 1151 3433 10105;10106;10107 7080 7080 1502;3295 1 TVPSTTTSSNYLAK GSHPLVSRTVPSTTTS TSSNYLAKAMVSQIST R T V A K A 1 0 1 0 0 0 0 0 0 0 1 1 0 0 1 3 4 0 1 1 0 0 14 0 1468.7409 Q6ZU65 Q6ZU65 1003 1016 UBN2 Ubinuclein-2 yes yes 2 0.018341 42.336 By MS/MS 1 0 0 0 0 3231 1566 3434 10108 7081 7081 2125;2126;3436;3437 1 TVSASSTGDLPK SPSHDRSRTVSASSTG SSTGDLPKAKTRAADL R T V P K A 1 0 0 1 0 0 0 1 0 0 1 1 0 0 1 3 2 0 0 1 0 0 12 0 1161.5877 H7C5L6;P78362 H7C5L6 99 110 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 2 1.8552E-14 120.55 By MS/MS By MS/MS By MS/MS 3 2 2 9670500 3540500 3490000 2640000 3232 879 3435;3436 10109;10110;10111;10112;10113;10114;10115 7082;7083;7084;7085;7086;7087;7088 7085 1180;1181;1182;3197 6 TVSDNSLSNSR DYTQPMKRTVSDNSLS DNSLSNSRGEGKPDLK R T V S R G 0 1 2 1 0 0 0 0 0 0 1 0 0 0 0 4 1 0 0 1 0 0 11 0 1178.5527 B7ZL14;H0Y7W6;Q96RU3 B7ZL14 294 304 FNBP1 Formin-binding protein 1 yes no 2 0.0061793 67.252 By MS/MS By MS/MS By MS/MS 2 2 2 5083200 1590300 2006200 1486700 3233 383 3437 10116;10117;10118;10119;10120;10121 7089;7090;7091;7092;7093 7093 508 5 TVSSPPTSPRPGSAATVSASTSNIIPPR SSELDASKTVSSPPTS TSNIIPPRHQKPAGAP K T V P R H 3 2 1 0 0 0 0 1 0 2 0 0 0 0 6 7 4 0 0 2 0 0 28 1 2734.425 O76094 O76094 618 645 SRP72 Signal recognition particle subunit SRP72 yes yes 3 2.8342E-06 55.061 By MS/MS By MS/MS By MS/MS 1 2 1 12830000 4298400 5473100 3058800 3234 1047 3438 10122;10123;10124;10125 7094;7095;7096;7097 7096 1404;1405;1406;3261;3262 3 TVTAMDVVYALK YTEHAKRKTVTAMDVV MDVVYALKRQGRTLYG K T V L K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 2 0 1 3 0 0 12 0 1309.6952 P62805 P62805 81 92 HIST1H4A Histone H4 yes yes 2 0.016184 51.092 By MS/MS By matching By matching 1 1 1 1076500 527000 300420 249120 3235 1313 3439 10126;10127;10128 7098 7098 0 TVTIWEIINSEYFTAEQR PFGKFQGKTVTIWEII EYFTAEQRRDLLRQFR K T V Q R R 1 1 1 0 0 1 3 0 0 3 0 0 0 1 0 1 3 1 1 1 0 0 18 0 2199.0848 Q15149 Q15149 3058 3075 PLEC Plectin yes yes 2 1.1867E-151 182.89 By MS/MS By MS/MS 1 1 16880000 0 7585300 9295100 3236 1435 3440 10129;10130 7099;7100 7100 2 TVVVTTILESPYVMMKK DTSGLENKTVVVTTIL SPYVMMKKNHEMLEGN K T V K K N 0 0 0 0 0 0 1 0 0 1 1 2 2 0 1 1 3 0 1 4 0 0 17 1 1938.057 F8W7L6;P42262 F8W7L6 368 384 GRIA2 Glutamate receptor 2 yes no 3 0.0062371 40.237 By MS/MS 1 2355000 0 0 2355000 3237 689 3441 10131 7101 7101 47;48 919;3695 1 TVWITSFYKSSLK YITALNIKTVWITSFY SFYKSSLKDFRYGVED K T V L K D 0 0 0 0 0 0 0 0 0 1 1 2 0 1 0 3 2 1 1 1 0 0 13 1 1558.8395 A0A087X0R9;B8ZZK1;Q07837 A0A087X0R9 159 171 SLC3A1 Neutral and basic amino acid transport protein rBAT yes no 2 0.015411 42.52 By MS/MS 1 0 0 0 0 3238 100 3442 10132 7102 7102 125;126;127;2895;2896 1 TYASGYAHYEEQEN FTNLNLGRTYASGYAH AHYEEQEN________ R T Y E N - 2 0 1 0 0 1 3 1 1 0 0 0 0 0 0 1 1 0 3 0 0 0 14 0 1660.6641 Q9Y3S2 Q9Y3S2 307 320 ZNF330 Zinc finger protein 330 yes yes 2 0.0032973 66.595 By matching By MS/MS By MS/MS 1 1 1 8811400 2691400 3397500 2722500 3239 1965 3443 10133;10134;10135 7103;7104 7104 2812;3938 2 TYIDPETYEDPNR HFKFPGTKTYIDPETY ETYEDPNRAVHQFAKE K T Y N R A 0 1 1 2 0 0 2 0 0 1 0 0 0 0 2 0 2 0 2 0 0 0 13 0 1611.7053 Q15375 Q15375 607 619 EPHA7 Ephrin type-A receptor 7 yes yes 2 0.0096141 45.368 By MS/MS By matching By MS/MS 1 1 1 1568900 723650 429840 415400 3240 1439 3444 10136;10137;10138 7105;7106 7105 3382;3383 2 TYSDEANQMR PKLFTHKRTYSDEANQ SDEANQMRVAPPRALL R T Y M R V 1 1 1 1 0 1 1 0 0 0 0 0 1 0 0 1 1 0 1 0 0 0 10 0 1213.5034 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 305 314 RAB11FIP5 Rab11 family-interacting protein 5 yes no 2 0.00074156 106.16 By MS/MS By MS/MS By matching 1 1 1 4712300 1376800 1800500 1535000 3241 269 3445 10139;10140;10141 7107;7108 7108 354 2 TYSLTTPAR LDRGLRKRTYSLTTPA YSLTTPARQRPVPQPS R T Y A R Q 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 3 0 1 0 0 0 9 0 1008.524 Q9Y4H2 Q9Y4H2 575 583 IRS2 Insulin receptor substrate 2 yes yes 2 0.009013 69.672 By MS/MS By MS/MS By matching 1 1 1 1538300 558180 622010 358130 3242 1970 3446 10142;10143;10144 7109;7110 7110 2818 2 TYSYLTPDLWK ATFDAISKTYSYLTPD YLTPDLWKETVFTKSP K T Y W K E 0 0 0 1 0 0 0 0 0 0 2 1 0 0 1 1 2 1 2 0 0 0 11 0 1385.6867 H0YEN5;P15880;E9PQD7 H0YEN5 149 159 RPS2 40S ribosomal protein S2 yes no 2 0.0039442 89.189 By MS/MS By matching 1 1 1727700 1338900 0 388810 3243 790 3447 10145;10146 7111 7111 3173 1 TYWIIIELK ITCSERVRTYWIIIEL YWIIIELKHKAREKPY R T Y L K H 0 0 0 0 0 0 1 0 0 3 1 1 0 0 0 0 1 1 1 0 0 0 9 0 1177.6747 B5MCA4;P16422 B5MCA4 169 177 EPCAM Epithelial cell adhesion molecule yes no 2 0.0059875 83.948 By MS/MS By MS/MS 1 1 4058600 0 2427800 1630800 3244 362 3448 10147;10148 7112;7113 7112 2 VAAAAGSGPSPPGSPGHDRER QVPGGAVRVAAAAGSG SPGHDRERQPLLDRAR R V A E R Q 4 2 0 1 0 0 1 4 1 0 0 0 0 0 4 3 0 0 0 1 0 0 21 1 1971.9511 Q9BTU6 Q9BTU6 38 58 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes yes 3 0.0053319 51.089 By MS/MS By matching By matching 1 1 1 5990000 2582900 2272400 1134700 3245 1780 3449 10149;10150;10151 7114;7115 7114 2471;2472;2473 2 VAAETQSPSLFGSTK NSESESNKVAAETQSP PSLFGSTKLQQESTFL K V A T K L 2 0 0 0 0 1 1 1 0 0 1 1 0 1 1 3 2 0 0 1 0 0 15 0 1521.7675 Q9UKX7 Q9UKX7 215 229 NUP50 Nuclear pore complex protein Nup50 yes yes 2 1.0146E-23 135.72 By MS/MS By MS/MS By MS/MS 1 1 1 25896000 8032500 11126000 6737500 3246 1919 3450 10152;10153;10154 7116;7117;7118;7119 7118 2710;2711 4 VAASPKSPTAALNESLVECPK GETENREKVAASPKSP ESLVECPKCNIQYPAT K V A P K C 4 0 1 0 1 0 2 0 0 0 2 2 0 0 3 3 1 0 0 2 0 0 21 1 2168.1147 Q53EZ4 Q53EZ4 422 442 CEP55 Centrosomal protein of 55 kDa yes yes 3 0.0024936 59.646 By MS/MS By matching By matching 1 1 1 4429400 1890300 1305900 1233200 3247 1477 3451 10155;10156;10157 7120 7120 1982;3402 1 VADLTEQYNEQYGAVR CPIDRSGRVADLTEQY NEQYGAVRTPYTMSYG R V A V R T 2 1 1 1 0 2 2 1 0 0 1 0 0 0 0 0 1 0 2 2 0 0 16 0 1854.8748 Q9BWF3 Q9BWF3 183 198 RBM4 RNA-binding protein 4 yes yes 2 1.4788E-07 91.123 By MS/MS By MS/MS By matching 1 1 1 5293700 2000800 1949600 1343300 3248 1788 3452 10158;10159;10160 7121;7122 7122 3907 2 VADNSFDAKR EEIEVDSRVADNSFDA DNSFDAKRGAAGDWGE R V A K R G 2 1 1 2 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 10 1 1121.5465 A0A0A0MRM9;Q14978 A0A0A0MRM9 648 657 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0063687 75.788 By matching By MS/MS By matching 1 1 1 1727000 561770 757670 407600 3249 137 3453 10161;10162;10163 7123 7123 185 1 VADPDHDHTGFLTEYVATR ICDFGLARVADPDHDH LTEYVATRWYRAPEIM R V A T R W 2 1 0 3 0 0 1 1 2 0 1 0 0 1 1 0 3 0 1 2 0 0 19 0 2142.997 P28482 P28482 173 191 MAPK1 Mitogen-activated protein kinase 1 yes yes 3;4 2.1802E-43 132.64 By MS/MS By MS/MS By MS/MS 3 3 3 199850000 88746000 53231000 57877000 3250 1200 3454;3455 10164;10165;10166;10167;10168;10169;10170;10171;10172 7124;7125;7126;7127;7128;7129;7130 7127 3307;3308;3774 7 VAGQDGSVVQFK ENDHINLKVAGQDGSV DGSVVQFKIKRHTPLS K V A F K I 1 0 0 1 0 2 0 2 0 0 0 1 0 1 0 1 0 0 0 3 0 0 12 0 1233.6354 A8MUA9;A8MU27;Q6EEV6;P61956;P55854 A8MUA9 21 32 SUMO3;SUMO4;SUMO2 Small ubiquitin-related modifier 4;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 3 yes no 2 0.0048589 73.067 By matching By MS/MS 1 1 1553700 377580 1176100 0 3251 317 3456 10173;10174 7131 7131 1 VALENDDRSEEEKYTAVQR SSAQYKARVALENDDR EKYTAVQRNSSEREGH R V A Q R N 2 2 1 2 0 1 4 0 0 0 1 1 0 0 0 1 1 0 1 2 0 0 19 2 2251.0717 H0YH87;F8WB06;F8VQP2;V9GY86;Q99700;F8VRK6 H0YH87 379 397 ATXN2 Ataxin-2 yes no 3 1.5251E-05 82.121 By MS/MS By matching By matching 1 1 1 4997500 2267100 1346400 1383900 3252 667 3457 10175;10176;10177 7132 7132 3689 1 VALSDDETKETENMR KEKKRGKRVALSDDET TKETENMRKKRRRIKL R V A M R K 1 1 1 2 0 0 3 0 0 0 1 1 1 0 0 1 2 0 0 1 0 0 15 1 1736.7887 H0YD46;Q15054 H0YD46 28 42 POLD3 DNA polymerase delta subunit 3 yes no 2;3 0.001967 71.529 By MS/MS By MS/MS By matching 2 2 2 68417000 21550000 22735000 24133000 3253 785 3458 10178;10179;10180;10181;10182;10183 7133;7134 7133 1070 2 VALTGLTVAEYFR EPPGARARVALTGLTV LTVAEYFRDQEGQDVL R V A F R D 2 1 0 0 0 0 1 1 0 0 2 0 0 1 0 0 2 0 1 2 0 0 13 0 1438.782 P06576;H0YH81;F8W0P7 P06576 282 294 ATP5B ATP synthase subunit beta, mitochondrial;ATP synthase subunit beta yes no 2 2.0265E-11 113.63 By MS/MS By MS/MS By MS/MS 1 1 1 6294300 3051100 1366600 1876600 3254 1112 3459 10184;10185;10186 7135;7136;7137 7137 3 VAPDEHPILLTEAPLNPK HTFYNELRVAPDEHPI TEAPLNPKINREKMTQ R V A P K I 2 0 1 1 0 0 2 0 1 1 3 1 0 0 4 0 1 0 0 1 0 0 18 0 1953.0571 Q562R1 Q562R1 97 114 ACTBL2 Beta-actin-like protein 2 yes yes 3 0.001214 58.658 By MS/MS By MS/MS By MS/MS 1 1 1 9304400 3779100 4525800 999530 3255 1482 3460 10187;10188;10189 7138;7139;7140 7139 3 VAPVINNGSPTILGK LSSLTPAKVAPVINNG GSPTILGKRSYEQHNG K V A G K R 1 0 2 0 0 0 0 2 0 2 1 1 0 0 2 1 1 0 0 2 0 0 15 0 1478.8457 H0Y4T7;E7ESY4;Q13330;F8W9Y9 H0Y4T7 360 374 MTA1 Metastasis-associated protein MTA1 yes no 2 0.0010409 78.191 By MS/MS 1 3405000 3405000 0 0 3256 541 3461 10190 7141 7141 698 1 VASEAPLEHKPQVEASSPR YEELQGLKVASEAPLE QVEASSPRLNPAVTCA K V A P R L 3 1 0 0 0 1 3 0 1 0 1 1 0 0 3 3 0 0 0 2 0 0 19 1 2031.0385 Q8TD19 Q8TD19 853 871 NEK9 Serine/threonine-protein kinase Nek9 yes yes 3 2.9493E-05 81.226 By MS/MS By MS/MS By MS/MS 1 1 1 20816000 12608000 5051900 3155500 3257 1672 3462 10191;10192;10193 7142;7143;7144 7142 2296 3 VASPSQGQVGSSSPK TLTDAQTRVASPSQGQ QVGSSSPKRSGMTAVP R V A P K R 1 0 0 0 0 2 0 2 0 0 0 1 0 0 2 5 0 0 0 2 0 0 15 0 1414.7052 Q99569;A0A0D9SF60 Q99569 325 339 PKP4 Plakophilin-4 yes no 2 0.00090856 73.951 By MS/MS By matching By matching 1 1 1 1774600 601530 662010 511030 3258 1766 3463 10194;10195;10196 7145 7145 2449;2450;2451 1 VATVSLPR SPATLNSRVATVSLPR VATVSLPRSCAAAGTE R V A P R S 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 0 8 0 841.50215 CON__P00761 CON__P00761 108 115 yes yes 2 0.013863 101.28 By MS/MS By matching By matching 1 1 1 9069700 6936300 1147400 985960 + 3259 462 3464 10197;10198;10199 7146 7146 1 VAYDLVYYVR IETDFGLRVAYDLVYY YDLVYYVRVTVPGNYY R V A V R V 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 3 3 0 0 10 0 1259.655 A0A087WUZ2;A0A087WXI2;Q9Y6R7 A0A087WUZ2 231 240 FCGBP IgGFc-binding protein yes no 2 0.0060392 78.334 By matching By MS/MS By matching 1 1 1 3084100 1170800 909300 1004000 3260 44 3465 10200;10201;10202 7147 7147 1 VCEATYDTTLVEK YGVTTIVRVCEATYDT YDTTLVEKEGIHVLDW R V C E K E 1 0 0 1 1 0 2 0 0 0 1 1 0 0 0 0 3 0 1 2 0 0 13 0 1527.7127 A0A0D9SGK2;Q93096 A0A0D9SGK2 48 60 PTP4A1 Protein tyrosine phosphatase type IVA 1 yes no 2 2.4872E-05 88.681 By matching By MS/MS By matching 1 1 1 1996700 586950 682430 727340 3261 220 3466 10203;10204;10205 7148;7149 7149 3600 2 VDDDSLGEFPVTNSR KRGAPDPRVDDDSLGE EFPVTNSRARKRILEP R V D S R A 0 1 1 3 0 0 1 1 0 0 1 0 0 1 1 2 1 0 0 2 0 0 15 0 1649.7533 J3KMZ8;Q92785 J3KMZ8 138 152 DPF2 Zinc finger protein ubi-d4 yes no 2 2.0445E-08 102.5 By MS/MS By matching By MS/MS 1 1 1 6956800 2619700 2517200 1819900 3262 897 3467 10206;10207;10208 7150;7151 7150 1205 2 VDDKPSSPGDSSKK ERERGTSRVDDKPSSP SPGDSSKKRG______ R V D K K R 0 0 0 3 0 0 0 1 0 0 0 3 0 0 2 4 0 0 0 1 0 0 14 2 1445.6998 C9JM54;C9J6K3;Q9HC52 C9JM54 160 173 CBX8 Chromobox protein homolog 8 yes no 3 0.0038092 74.726 By MS/MS By MS/MS By matching 1 1 1 3474600 1151400 1190800 1132500 3263 417 3468 10209;10210;10211 7152;7153 7152 553;554 2 VDENFDCVEADDVEGK FRVEYASKVDENFDCV EADDVEGKIRQIIPPG K V D G K I 1 0 1 4 1 0 3 1 0 0 0 1 0 1 0 0 0 0 0 3 0 0 16 0 1839.7469 O14929 O14929 95 110 HAT1 Histone acetyltransferase type B catalytic subunit yes yes 2 0.015605 49.448 By MS/MS 1 641780 0 641780 0 3264 985 3469 10212 7154 7154 1 VDESALAAQAYALK DSPTKKMRVDESALAA AAQAYALKEENDSLRW R V D L K E 5 0 0 1 0 1 1 0 0 0 2 1 0 0 0 1 0 0 1 1 0 0 14 0 1448.7511 Q8TC92 Q8TC92 417 430 ENOX1 Ecto-NOX disulfide-thiol exchanger 1;Hydroquinone [NADH] oxidase;Protein disulfide-thiol oxidoreductase yes yes 2 0.0038253 69.864 By matching By MS/MS By matching 1 1 1 1946100 582100 718490 645540 3265 1670 3470 10213;10214;10215 7155 7155 2291 1 VDIIPGFEFDR FPELKKKRVDIIPGFE IPGFEFDRWLNTPGWP R V D D R W 0 1 0 2 0 0 1 1 0 2 0 0 0 2 1 0 0 0 0 1 0 0 11 0 1306.6558 A6NKB8;Q9H4A4 A6NKB8 432 442 RNPEP Aminopeptidase B yes no 3 0.0081009 50.353 By MS/MS By matching By matching 1 1 1 1289700 444530 467870 377320 3266 306 3471 10216;10217;10218 7156 7156 1 VDKDLQSLEDILHQVENK FLSTYQTKVDKDLQSL ILHQVENKTSEVKQLI K V D N K T 0 0 1 3 0 2 2 0 1 1 3 2 0 0 0 1 0 0 0 2 0 0 18 1 2122.0906 C9JEU5;C9JC84;P02679 C9JEU5 62 79 FGG Fibrinogen gamma chain yes no 3 4.3098E-06 84.41 By MS/MS By matching By matching 1 1 1 3556200 1244300 1300400 1011500 3267 429 3472 10219;10220;10221 7157 7157 26 1 VDNDENEHQLSLR ADKDYHFKVDNDENEH NEHQLSLRTVSLGAGA K V D L R T 0 1 2 2 0 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 0 13 0 1567.7227 P06748;E5RGW4 P06748 33 45 NPM1 Nucleophosmin yes no 2;3 0.0003442 89.43 By MS/MS By MS/MS By MS/MS 2 2 1 5728300 1610000 3334500 783810 3268 1114 3473 10222;10223;10224;10225;10226 7158;7159;7160;7161 7159 4 VDNKRFYFDVGSNK LPEGTSFRVDNKRFYF YFDVGSNKYGIFLKVS R V D N K Y 0 1 2 2 0 0 0 1 0 0 0 2 0 2 0 1 0 0 1 2 0 0 14 2 1687.8318 Q9UJV8 Q9UJV8 269 282 PURG Purine-rich element-binding protein gamma yes yes 2 0.01143 50.108 By MS/MS 1 0 0 0 0 3269 1909 3474 10227 7162 7162 2692 1 VDNLTYRTSPDTLR VEGMTSLKVDNLTYRT RTSPDTLRRVFEKYGR K V D L R R 0 2 1 2 0 0 0 0 0 0 2 0 0 0 1 1 3 0 1 1 0 0 14 1 1649.8373 J3QL05;J3KP15;Q01130 J3QL05 18 31 SRSF2 Serine/arginine-rich splicing factor 2 yes no 3 0.0023158 68.277 By MS/MS By MS/MS By matching 1 1 1 5664200 2208200 2321300 1134700 3270 901 3475 10228;10229;10230 7163;7164 7163 1209;3725 2 VDPESLHKYSAYPETKPSAK GVHRVSARVDPESLHK PETKPSAKVLVSSQVE R V D A K V 2 0 0 1 0 0 2 0 1 0 1 3 0 0 3 3 1 0 2 1 0 0 20 2 2246.1219 Q8NEP4 Q8NEP4 291 310 C17orf47 Uncharacterized protein C17orf47 yes yes 3 0.018482 40.179 By MS/MS 1 0 0 0 0 3271 1658 3476 10231 7165 7165 2272;2273;2274;3878 1 VDQSAVGFEYQGKTEK KFGVQMDRVDQSAVGF EYQGKTEKHASQKDYS R V D E K H 1 0 0 1 0 2 2 2 0 0 0 2 0 1 0 1 1 0 1 2 0 0 16 1 1784.8581 Q14247 Q14247 132 147 CTTN Src substrate cortactin yes yes 2 0.0094815 56.551 By MS/MS 1 0 0 0 0 3272 1408 3477 10232 7166 7166 3842 1 VDSEGDFSENDDAAGDFR EPDTKLARVDSEGDFS DDAAGDFRSGDEEFKG R V D F R S 2 1 1 5 0 0 2 2 0 0 0 0 0 2 0 2 0 0 0 1 0 0 18 0 1944.761 M0QYL4;O43823 M0QYL4 135 152 AKAP8 A-kinase anchor protein 8 yes no 2 0.010249 48.659 By MS/MS By matching By matching 1 1 1 1077500 322640 393680 361190 3273 961 3478 10233;10234;10235 7167 7167 1264 1 VDSTTCLFPVEEK KGSCNLSRVDSTTCLF CLFPVEEKAVEYYFAS R V D E K A 0 0 0 1 1 0 2 0 0 0 1 1 0 1 1 1 2 0 0 2 0 0 13 0 1523.7178 Q06210 Q06210 259 271 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes yes 2 3.4781E-12 115.8 By matching By MS/MS By MS/MS 1 1 1 33349000 12710000 11809000 8829000 3274 1348 3479 10236;10237;10238 7168;7169 7169 1770 2 VDVSCEPLEGVEK DVKEPSPRVDVSCEPL EPLEGVEKCSDSQSWE R V D E K C 0 0 0 1 1 0 3 1 0 0 1 1 0 0 1 1 0 0 0 3 0 0 13 0 1459.6865 Q12888;A6NNK5;C9JXV0;H7C3N7 Q12888 768 780 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.012251 52.576 By matching By MS/MS 1 1 834400 0 495870 338520 3275 1367 3480 10239;10240 7170 7170 1807 1 VDYVVVDQQK GSSVADERVDYVVVDQ YVVVDQQKTLALKSTR R V D Q K T 0 0 0 2 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 4 0 0 10 0 1191.6136 B7Z3B9;Q13480 B7Z3B9 554 563 GAB1 GRB2-associated-binding protein 1 yes no 2 0.0052273 70.1 By matching By matching By MS/MS 1 1 1 2369100 640330 1030500 698240 3276 371 3481 10241;10242;10243 7171 7171 3636 1 VEAPASVDWQKR ________________ ASVDWQKRCLTLETQL K V E K R C 2 1 0 1 0 1 1 0 0 0 0 1 0 0 1 1 0 1 0 2 0 0 12 1 1384.7099 Q9ULM0 Q9ULM0 6 17 PLEKHH1 Pleckstrin homology domain-containing family H member 1 yes yes 2 0.015098 48.568 By MS/MS 1 292120 0 0 292120 3277 1929 3482 10244 7172 7172 2723 1 VEEEQEADEEDVSEEEAESK ESAQPLKKVEEEQEAD SEEEAESKEGTNKDFP K V E S K E 2 0 0 2 0 1 10 0 0 0 0 1 0 0 0 2 0 0 0 2 0 0 20 0 2308.919 Q9H3N1 Q9H3N1 235 254 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 2 0.0025904 61.957 By MS/MS By MS/MS By matching 1 1 1 22481000 8416800 7359000 6705100 3278 1820 3483 10245;10246;10247 7173;7174 7173 2553;2554 2 VEEFLYEKLDR ________________ FLYEKLDRKVPSRVTN - V E D R K 0 1 0 1 0 0 3 0 0 0 2 1 0 1 0 0 0 0 1 1 0 0 11 1 1439.7296 H7C1Z6;F8WFB9;B7ZC39;B7ZC38;Q9NR46 H7C1Z6 1 11 SH3GLB2 Endophilin-B2 yes no 2 9.1193E-06 111.46 By MS/MS By MS/MS By MS/MS 1 1 1 3354200 1334000 773800 1246400 3279 380 3484 10248;10249;10250 7175;7176;7177 7177 3637 3 VEGDNIYVR EGKKNSLRVEGDNIYV EGDNIYVRHSNLMLEE R V E V R H 0 1 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 2 0 0 9 0 1063.5298 O43491;H0Y5B0;E9PMV8;E9PPC9;Q6ZSX4 O43491 617 625 EPB41L2 Band 4.1-like protein 2 yes no 2 0.002195 121.09 By MS/MS By MS/MS By MS/MS 1 1 1 78048000 25049000 30196000 22803000 3280 1012 3485 10251;10252;10253 7178;7179;7180 7180 3751 3 VEKIGEGTYGVVYK ________________ GTYGVVYKARNKLTGE K V E Y K A 0 0 0 0 0 0 2 3 0 1 0 2 0 0 0 0 1 0 2 3 0 0 14 1 1540.8137 G3V317;K7ELV5;E7ESI2;G3V5T9;P24941;Q00526 G3V317 7 20 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 2;3 0.0056829 57.267 By MS/MS By matching By matching 2 1 1 5370900 2068900 1493000 1809000 3281 537 3486 10254;10255;10256;10257 7181;7182 7181 3062;3666;3667 1 VELQELNDR KNTRTNEKVELQELND ELQELNDRFANYIDKV K V E D R F 0 1 1 1 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 9 0 1114.5619 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GUA0;P17661 P08670 105 113 VIM;DES Vimentin;Desmin yes no 2 0.015821 69.628 By MS/MS By MS/MS 1 1 2181700 1266200 0 915530 3282 1129 3487 10258;10259 7183;7184 7183 2 VEMYSGSDDDDDFNKLPK SKKTAKPKVEMYSGSD DDFNKLPKKAKGKAQK K V E P K K 0 0 1 5 0 0 1 1 0 0 1 2 1 1 1 2 0 0 1 1 0 0 18 1 2073.8837 A0A087WUT6;O60841 A0A087WUT6 131 148 EIF5B Eukaryotic translation initiation factor 5B yes no 2 0.01132 42.789 By MS/MS 1 7365900 0 7365900 0 3283 41 3488 10260 7185 7185 52;53;3573 1 VEQALSEVASSLQSSAPK ATSVAASRVEQALSEV SLQSSAPKQGPLHPWM R V E P K Q 3 0 0 0 0 2 2 0 0 0 2 1 0 0 1 5 0 0 0 2 0 0 18 0 1829.9371 H0YK02;H0YJS2;A0A0C4DGK5;Q86TV6 H0YK02 77 94 TTC7B Tetratricopeptide repeat protein 7B yes no 2 0.0094561 49.243 By matching By matching By MS/MS 1 1 1 1880600 648910 499140 732560 3284 203 3489 10261;10262;10263 7186 7186 283;284 1 VEQMPQASPGLAPR SGELVEPRVEQMPQAS ASPGLAPRTRGSSGPQ R V E P R T 2 1 0 0 0 2 1 1 0 0 1 0 1 0 3 1 0 0 0 1 0 0 14 0 1479.7504 Q8N3F8;H0Y6J8 Q8N3F8 571 584 MICALL1 MICAL-like protein 1 yes no 2 0.0050509 60.55 By MS/MS By MS/MS By MS/MS 1 1 1 3166800 940710 1102100 1124000 3285 1628 3490 10264;10265;10266 7187;7188;7189 7189 2233 3 VFAVVITDGR ESRRQKTRVFAVVITD AVVITDGRHDPRDDDL R V F G R H 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 3 0 0 10 0 1075.6026 P12110 P12110 725 734 COL6A2 Collagen alpha-2(VI) chain yes yes 2 0.0036035 88.948 By MS/MS By MS/MS By MS/MS 1 1 1 16000000 8528800 3597500 3873900 3286 1150 3491 10267;10268;10269 7190;7191;7192 7192 3 VFDDESDEKEDEEYADEKGLEAADK EEEDTYEKVFDDESDE KGLEAADKKAEEGDAD K V F D K K 3 0 0 6 0 0 7 1 0 0 1 3 0 1 0 1 0 0 1 1 0 0 25 2 2875.2043 O43719 O43719 637 661 HTATSF1 HIV Tat-specific factor 1 yes yes 3 0.013865 49.076 By MS/MS By matching By matching 1 1 1 5114200 2101200 1662600 1350400 3287 1014 3492 10270;10271;10272 7193 7193 1355 1 VFDEFKPLVEEPQNLIK DPHECYAKVFDEFKPL EEPQNLIKQNCELFEQ K V F I K Q 0 0 1 1 0 1 3 0 0 1 2 2 0 2 2 0 0 0 0 2 0 0 17 1 2044.0881 A0A0C4DGB6;CON__P02768-1;P02768;B7WNR0;H0YA55;D6RHD5;C9JKR2;A0A087WWT3 A0A0C4DGB6 397 413 ALB Serum albumin yes no 3 0.0010315 66.826 By MS/MS By MS/MS 1 1 3717400 0 1384200 2333200 + 3288 194 3493 10273;10274 7194;7195 7195 2 VFDKDGNGYISAAELR EEIREAFRVFDKDGNG YISAAELRHVMTNLGE R V F L R H 2 1 1 2 0 0 1 2 0 1 1 1 0 1 0 1 0 0 1 1 0 0 16 1 1753.8635 P0DP25;P0DP24;P0DP23;E7ETZ0;H0Y7A7;E7EMB3;G3V361;Q96HY3 P0DP25 92 107 CALM1;CALM2 yes no 2 4.0358E-08 98.902 By MS/MS By matching By MS/MS 2 2 2 11379000 3895900 4876100 2607200 3289 518 3494;3495 10275;10276;10277;10278;10279;10280 7196;7197 7196 656;3664 2 VFEVSLADLQNDEVAFR ASDGLKGRVFEVSLAD QNDEVAFRKFKLITED R V F F R K 2 1 1 2 0 1 2 0 0 0 2 0 0 2 0 1 0 0 0 3 0 0 17 0 1950.9687 D6RAT0;P61247;D6RGE0;D6RI02;D6RED7;D6RAS7;H0Y8L7;D6RB09;E9PFI5;D6RG13 D6RAT0 29 45 RPS3A 40S ribosomal protein S3a yes no 2 2.9686E-13 104.41 By MS/MS By matching By matching 1 1 1 6968500 5224400 637800 1106300 3290 486 3496 10281;10282;10283 7198 7198 1 VFSNGADLSGVTEEAPLK LGQLGITKVFSNGADL VTEEAPLKLSKAVHKA K V F L K L 2 0 1 1 0 0 2 2 0 0 2 1 0 1 1 2 1 0 0 2 0 0 18 0 1832.9156 P01009;A0A0G2JRN3;A0A024R6I7 P01009 335 352 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 0.0040863 69.602 By MS/MS By MS/MS By MS/MS 2 2 2 6508500 3861500 1069400 1577600 3291 1085 3497;3498 10284;10285;10286;10287;10288;10289 7199;7200;7201 7201 56 3 VFSVAITPDHLEPR EAKHLGVKVFSVAITP TPDHLEPRLSIIATDH K V F P R L 1 1 0 1 0 0 1 0 1 1 1 0 0 1 2 1 1 0 0 2 0 0 14 0 1579.8358 A0A087X0S5;P12109 A0A087X0S5 186 199 COL6A1 Collagen alpha-1(VI) chain yes no 3 0.015311 90.614 By MS/MS By matching 1 1 527160 326510 200650 0 3292 101 3499 10290;10291 7202 7202 0 VGDGDLSAEEIPENEVSLR TMEEQKTKVGDGDLSA PENEVSLRRAVSKKKT K V G L R R 1 1 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 0 19 0 2027.9647 Q14684 Q14684 239 257 RRP1B Ribosomal RNA processing protein 1 homolog B yes yes 2 0.009237 49.537 By MS/MS By matching By MS/MS 1 1 1 13101000 4699300 4529900 3871600 3293 1418 3500 10292;10293;10294 7203;7204 7204 1894 2 VGDTEKPEPERSPPNR EPKARPLRVGDTEKPE PERSPPNRKRPANEKA R V G N R K 0 2 1 1 0 0 3 1 0 0 0 1 0 0 4 1 1 0 0 1 0 0 16 2 1806.886 Q9NZ63 Q9NZ63 250 265 C9orf78 Uncharacterized protein C9orf78 yes yes 3 9.8371E-05 84.753 By MS/MS By MS/MS By MS/MS 1 1 1 34326000 14091000 11044000 9190900 3294 1882 3501 10295;10296;10297 7205;7206;7207 7206 2655 3 VGDVTPQVK KAAPAPGKVGDVTPQV GDVTPQVKGGALPPAK K V G V K G 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 1 0 0 3 0 0 9 0 941.5182 J3KQ96;E7ETY2;Q13428 J3KQ96 245 253 TCOF1 Treacle protein yes no 2 0.00028967 91.701 By MS/MS By MS/MS By MS/MS 1 1 1 544530 0 544530 0 3295 545 3502 10298;10299;10300 7208;7209;7210 7210 3069 3 VGEEEHVYSFPNK SVGSPCSRVGEEEHVY HVYSFPNKQKSAEPSP R V G N K Q 0 0 1 0 0 0 3 1 1 0 0 1 0 1 1 1 0 0 1 2 0 0 13 0 1533.71 F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023 F5H836 112 124 PXN Paxillin yes no 2;3 5.595E-16 134.2 By MS/MS By MS/MS By MS/MS 2 2 2 16761000 4507700 6911600 5341600 3296 271 3503 10301;10302;10303;10304;10305;10306 7211;7212;7213;7214;7215;7216 7212 360;3610 6 VGEEEHVYSFPNKQK SVGSPCSRVGEEEHVY YSFPNKQKSAEPSPTV R V G Q K S 0 0 1 0 0 1 3 1 1 0 0 2 0 1 1 1 0 0 1 2 0 0 15 1 1789.8635 F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023 F5H836 112 126 PXN Paxillin yes no 3 5.8632E-05 85.176 By MS/MS By MS/MS By matching 1 1 1 7167600 3376000 2055700 1735800 3297 271 3504 10307;10308;10309 7217;7218 7218 360;3610 2 VGFQYEGTYK EADELMKRVGFQYEGT FQYEGTYKWVNPHKL_ R V G Y K W 0 0 0 0 0 1 1 2 0 0 0 1 0 1 0 0 1 0 2 1 0 0 10 0 1190.5608 P11413 P11413 499 508 G6PD Glucose-6-phosphate 1-dehydrogenase yes yes 2 0.0090262 88.37 By MS/MS By matching By MS/MS 1 1 1 1550200 519830 600620 429800 3298 1146 3505 10310;10311;10312 7219;7220 7219 3290;3768 2 VGGHAAEYGAEALER NVKAAWGKVGGHAAEY YGAEALERMFLSFPTT K V G E R M 4 1 0 0 0 0 3 3 1 0 1 0 0 0 0 0 0 0 1 1 0 0 15 0 1528.727 CON__P01966 CON__P01966 18 32 yes yes 3 0.00069122 55.335 By MS/MS By matching By MS/MS 1 1 1 1220800 650030 281710 289070 + 3299 464 3506 10313;10314;10315 7221;7222 7222 1 VGGSDEEASGIPSR LEGMKKARVGGSDEEA EASGIPSRTASLELDL R V G S R T 1 1 0 1 0 0 2 3 0 1 0 0 0 0 1 3 0 0 0 1 0 0 14 0 1359.6266 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55 H7C446 116 129 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog yes no 2 2.1302E-220 204.17 By MS/MS By MS/MS By MS/MS 1 1 1 95870000 31176000 33943000 30751000 3300 172 3507 10316;10317;10318 7223;7224;7225;7226 7223 235 4 VGGSSVDLHR YGPQPQVRVGGSSVDL GSSVDLHRFHPEPYGL R V G H R F 0 1 0 1 0 0 0 2 1 0 1 0 0 0 0 2 0 0 0 2 0 0 10 0 1025.5254 C9JZR2;O60716;E9PRE2 C9JZR2 265 274 CTNND1 Catenin delta-1 yes no 2 0.003629 77.674 By MS/MS By MS/MS By MS/MS 2 2 2 6034100 2264000 2146300 1623900 3301 459 3508 10319;10320;10321;10322;10323;10324 7227;7228;7229;7230;7231 7231 607;608 5 VGGTSDVEVNEK SDGVAVLKVGGTSDVE SDVEVNEKKDRVTDAL K V G E K K 0 0 1 1 0 0 2 2 0 0 0 1 0 0 0 1 1 0 0 3 0 0 12 0 1232.5885 P10809 P10809 406 417 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.014088 60.167 By matching By MS/MS 1 1 1577600 441180 1136400 0 3302 1140 3509 10325;10326 7232 7232 1 VGIFPSNYVTPR WTGQLNQRVGIFPSNY PSNYVTPRSAFSSRCQ R V G P R S 0 1 1 0 0 0 0 1 0 1 0 0 0 1 2 1 1 0 1 2 0 0 12 0 1348.7139 J3KPI6;P80192 J3KPI6 103 114 MAP3K9 Mitogen-activated protein kinase kinase kinase 9 yes no 2 0.011703 45.997 By MS/MS By matching By matching 1 1 1 41838000 16685000 12295000 12858000 3303 906 3510 10327;10328;10329 7233 7233 1216;3212;3727 1 VGKEDSSSTEFVEK IVGMTKVKVGKEDSSS SSTEFVEKRRAALERY K V G E K R 0 0 0 1 0 0 3 1 0 0 0 2 0 1 0 3 1 0 0 2 0 0 14 1 1540.7257 O60749;D6RC15 O60749 221 234 SNX2 Sorting nexin-2 yes no 2 0.0022955 73.722 By matching By MS/MS By matching 1 1 1 1727800 678180 634530 415040 3304 1024 3511 10330;10331;10332 7234 7234 1372;3247 1 VGLQVVAVK TLVLNRLKVGLQVVAV GLQVVAVKAPGFGDNR K V G V K A 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 4 0 0 9 0 911.5804 P10809 P10809 293 301 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.013058 77.282 By MS/MS By MS/MS 1 1 1819200 317840 1501300 0 3305 1140 3512 10333;10334 7235;7236;7237 7236 3 VGNESPVQELK ETENTAYKVGNESPVQ ESPVQELKQDVSKKII K V G L K Q 0 0 1 0 0 1 2 1 0 0 1 1 0 0 1 1 0 0 0 2 0 0 11 0 1198.6194 Q5JSH3 Q5JSH3 46 56 WDR44 WD repeat-containing protein 44 yes yes 2 0.0015572 100.93 By MS/MS By MS/MS By MS/MS 1 1 1 24975000 8489100 8835900 7649600 3306 1486 3513 10335;10336;10337 7238;7239;7240 7240 1997 3 VGSLDNVGHLPAGGAVK FKEKAQAKVGSLDNVG LPAGGAVKTEGGGSEA K V G V K T 2 0 1 1 0 0 0 4 1 0 2 1 0 0 1 1 0 0 0 3 0 0 17 0 1589.8526 E7EVA0;P27816;H0Y2V1;H7C4C5;F8W9U4 E7EVA0 2216 2232 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 7.887E-83 161.08 By MS/MS By matching By MS/MS 2 2 1 60297000 25083000 20795000 14419000 3307 551 3514 10338;10339;10340;10341;10342 7241;7242;7243 7242 732 3 VGSLTPPSSPK PPAVQGQKVGSLTPPS LTPPSSPKTQRAGHRR K V G P K T 0 0 0 0 0 0 0 1 0 0 1 1 0 0 3 3 1 0 0 1 0 0 11 0 1068.5815 E9PG46;Q2M2I8 E9PG46 616 626 AAK1 AP2-associated protein kinase 1 yes no 2 0.0024305 90.697 By MS/MS By MS/MS By matching 1 1 1 6339800 2257900 2178200 1903700 3308 580 3515 10343;10344;10345 7244;7245 7244 761;762;3083 2 VGSLTPPSSPKTQR PPAVQGQKVGSLTPPS PSSPKTQRAGHRRILS K V G Q R A 0 1 0 0 0 1 0 1 0 0 1 1 0 0 3 3 2 0 0 1 0 0 14 1 1453.7889 E9PG46;Q2M2I8 E9PG46 616 629 AAK1 AP2-associated protein kinase 1 yes no 2 0.0032797 67.095 By matching By matching By MS/MS 1 1 1 3344900 1083000 1039900 1221900 3309 580 3516 10346;10347;10348 7246 7246 761;762;3083 1 VGSPATVTFQQNK TKMVLTTKVGSPATVT TVTFQQNKNFHQTFAT K V G N K N 1 0 1 0 0 2 0 1 0 0 0 1 0 1 1 1 2 0 0 2 0 0 13 0 1375.7096 F5GXF5;E7ETD6;Q12830;J3QQK4 F5GXF5 2033 2045 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.013251 51.436 By matching By MS/MS By matching 1 1 1 1204300 323240 558390 322690 3310 542 3517 10349;10350;10351 7247 7247 700 1 VGTIDDDPEYR KTKKRDTKVGTIDDDP IDDDPEYRKFLESYAT K V G Y R K 0 1 0 3 0 0 1 1 0 1 0 0 0 0 1 0 1 0 1 1 0 0 11 0 1278.5728 Q9BZI7;A0A087WYC8 Q9BZI7 151 161 UPF3B Regulator of nonsense transcripts 3B yes no 2 0.0011199 88.495 By matching By MS/MS By matching 1 1 1 2883800 953150 1166300 764330 3311 1802 3518 10352;10353;10354 7248 7248 3909 1 VGVEASEETPQTSSSSARPGTPSDHQSQEASQFER KEGEKTDRVGVEASEE QEASQFERKDEPKTEQ R V G E R K 3 2 0 1 0 4 5 2 1 0 0 0 0 1 3 8 3 0 0 2 0 0 35 1 3702.663 I1E4Y6;Q6Y7W6;E7ESB6;C9JHW1 I1E4Y6 384 418 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 4 6.033E-16 74.838 By MS/MS By matching By matching 1 1 1 43963000 19645000 12997000 11321000 3312 881 3519 10355;10356;10357 7249 7249 3199 1 VGVVQYSHEGTFEAIQLDDER PKSETGTRVGVVQYSH AIQLDDERIDSLSSFK R V G E R I 1 1 0 2 0 2 3 2 1 1 1 0 0 1 0 1 1 0 1 3 0 0 21 0 2391.1343 P12110;H7C0M5 P12110 660 680 COL6A2 Collagen alpha-2(VI) chain yes no 3 2.7636E-32 114.88 By MS/MS By matching By MS/MS 1 1 1 6115400 2769100 1767000 1579300 3313 1150 3520 10358;10359;10360 7250;7251 7250 2 VHAYFAPVTPPPSVGGSR RTHLPNIKVHAYFAPV PPSVGGSRQRFCRCCI K V H S R Q 2 1 0 0 0 0 0 2 1 0 0 0 0 1 4 2 1 0 1 3 0 0 18 0 1837.9475 J3KTA1;Q96IG2 J3KTA1 411 428 FBXL20 F-box/LRR-repeat protein 20 yes no 3 0.0094386 49.768 By MS/MS By matching 1 1 928240 644780 0 283460 3314 919 3521 10361;10362 7252 7252 3217 0 VHGEPTSDLSDID RAMNHLSRVHGEPTSD TSDLSDID________ R V H I D - 0 0 0 3 0 0 1 1 1 1 1 0 0 0 1 2 1 0 0 1 0 0 13 0 1383.6154 O95696 O95696 1046 1058 BRD1 Bromodomain-containing protein 1 yes yes 2 0.0032794 71.268 By MS/MS By matching By MS/MS 1 1 1 12242000 4063900 4201500 3976100 3315 1072 3522 10363;10364;10365 7253;7254 7254 1441;1442 2 VHSEAISPAPEEK IVHAVGERVHSEAISP ISPAPEEKAVTLRSLR R V H E K A 2 0 0 0 0 0 3 0 1 1 0 1 0 0 2 2 0 0 0 1 0 0 13 0 1392.6885 Q9BY89 Q9BY89 743 755 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.018651 48.608 By MS/MS By matching By matching 1 1 1 1335200 559920 454590 320730 3316 1798 3523 10366;10367;10368 7255 7255 2499 1 VHVQFFDDSPTR REKGKSVRVHVQFFDD FFDDSPTRGWVSKRLL R V H T R G 0 1 0 2 0 1 0 0 1 0 0 0 0 2 1 1 1 0 0 2 0 0 12 0 1446.6892 U3KQ72;C9JH55;C9J8Y8;C9J7Y7;F8WAX8;A0A087WWJ1;P52701 U3KQ72 30 41 MSH6 DNA mismatch repair protein Msh6 yes no 2 5.0498E-08 114.7 By MS/MS By MS/MS By MS/MS 1 1 1 10601000 3900600 3489000 3211400 3317 63 3524 10369;10370;10371 7256;7257;7258 7256 79;2881 3 VIAVYDLGGGTFDISILEIQK GLDKSEDKVIAVYDLG ISILEIQKGVFEVKST K V I Q K G 1 0 0 2 0 1 1 3 0 4 2 1 0 1 0 1 1 0 1 2 0 0 21 0 2250.2148 P38646 P38646 239 259 HSPA9 Stress-70 protein, mitochondrial yes yes 2 3.9728E-17 96.371 By matching By matching By MS/MS 1 1 1 8348300 3339800 2065000 2943400 3318 1228 3525 10372;10373;10374 7259 7259 1 VIDPATATSVDLR MSVNAVMKVIDPATAT TATSVDLRDIKIVKKL K V I L R D 2 1 0 2 0 0 0 0 0 1 1 0 0 0 1 1 2 0 0 2 0 0 13 0 1356.7249 P50991 P50991 194 206 CCT4 T-complex protein 1 subunit delta yes yes 2 0.0017053 80.763 By MS/MS 1 616490 0 616490 0 3319 1273 3526 10375 7260 7260 1 VIEDDPEAVYTTTGGK VSDFGLSRVIEDDPEA VYTTTGGKIPVRWTAP R V I G K I 1 0 0 2 0 0 2 2 0 1 0 1 0 0 1 0 3 0 1 2 0 0 16 0 1693.8047 Q15375 Q15375 782 797 EPHA7 Ephrin type-A receptor 7 yes yes 2 0.0012935 73.273 By MS/MS 1 0 0 0 0 3320 1439 3527 10376 7261 7261 3384;3847 1 VIEDDPEAVYTTTGGKIPVR VSDFGLSRVIEDDPEA TGGKIPVRWTAPEAIQ R V I V R W 1 1 0 2 0 0 2 2 0 2 0 1 0 0 2 0 3 0 1 3 0 0 20 1 2159.111 Q15375 Q15375 782 801 EPHA7 Ephrin type-A receptor 7 yes yes 3 0.0106 59.502 By matching By MS/MS By matching 1 1 1 3576000 1291100 1438900 845910 3321 1439 3528 10377;10378;10379 7262 7262 3384;3847 1 VIEDNEYTAR IADFGLARVIEDNEYT EDNEYTAREGAKFPIK R V I A R E 1 1 1 1 0 0 2 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 10 0 1208.5673 P07948;H0Y3C5;J3KPD6;P08631 P07948 391 400 LYN;HCK Tyrosine-protein kinase Lyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase HCK yes no 2 1.7006E-05 113.66 By MS/MS By MS/MS By MS/MS 2 2 1 10630000 4097100 4643600 1888900 3322 1123 3529 10380;10381;10382;10383;10384 7263;7264;7265;7266 7264 3280;3761 3 VIEVSHWGNIAVEENVDLK LTITSMTRVIEVSHWG VEENVDLKHTGAVLKG R V I L K H 1 0 2 1 0 0 3 1 1 2 1 1 0 0 0 1 0 1 0 4 0 0 19 0 2150.1008 B7Z4L4;P04843 B7Z4L4 61 79 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 3 0.0053395 45.608 By MS/MS 1 718480 718480 0 0 3323 373 3530 10385 7267 7267 1 VIGGDDLSTLTGK DQSTGDIKVIGGDDLS DLSTLTGKNVLIVEDI K V I G K N 0 0 0 2 0 0 0 3 0 1 2 1 0 0 0 1 2 0 0 1 0 0 13 0 1274.6718 P00492 P00492 116 128 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 2 0.0064643 70.1 By MS/MS By matching By matching 1 1 1 1406300 333250 730510 342550 3324 1080 3531 10386;10387;10388 7268 7268 1 VIGSGCNLDSAR LSGLPKHRVIGSGCNL GCNLDSARFRYLMAEK R V I A R F 1 1 1 1 1 0 0 2 0 1 1 0 0 0 0 2 0 0 0 1 0 0 12 0 1247.5928 P07195;A8MW50;F5H5G7;F5H155;A0A087WUM2;G3XAP5;F5H245;Q6ZMR3;P07864;P00338 P07195 159 170 LDHB;LDHC;LDHAL6A;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase A chain no no 2 1.884E-10 134.57 By MS/MS By MS/MS By MS/MS 1 1 1 8173600 1891900 5151500 1130300 3325 1115;1077 3532 10389;10390;10391 7269;7270;7271 7270 3 VIHLQFNNIASITDDTFCK LNLPESLRVIHLQFNN ITDDTFCKANDTSYIR R V I C K A 1 0 2 2 1 1 0 0 1 3 1 1 0 2 0 1 2 0 0 1 0 0 19 0 2235.0994 P20774 P20774 238 256 OGN Mimecan yes yes 3 1.5475E-12 91.475 By MS/MS By MS/MS By MS/MS 2 2 2 9186600 4188200 2360400 2637900 3326 1181 3533;3534 10392;10393;10394;10395;10396;10397 7272;7273;7274;7275 7272 69 4 VIKDEALSDGDDLR TVKSENLKVIKDEALS LSDGDDLRDFPSDLKK K V I L R D 1 1 0 4 0 0 1 1 0 1 2 1 0 0 0 1 0 0 0 1 0 0 14 1 1544.7682 E7EUB5;Q01831 E7EUB5 81 94 XPC DNA repair protein complementing XP-C cells yes no 2 0.00026312 84.759 By MS/MS By matching By MS/MS 1 1 1 4976000 1382200 2031700 1562100 3327 547 3535 10398;10399;10400 7276;7277 7276 718 2 VILASPETSSAK PDGAGTGKVILASPET SPETSSAKQLIFTTSD K V I A K Q 2 0 0 0 0 0 1 0 0 1 1 1 0 0 1 3 1 0 0 1 0 0 12 0 1201.6554 C9JKS0;P49116 C9JKS0 83 94 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.011305 55.452 By MS/MS By matching By matching 1 1 1 1623200 543600 451680 627970 3328 439 3536 10401;10402;10403 7278 7278 579 1 VIQYLAYVASSHK GKTENTKKVIQYLAYV AYVASSHKSKKDQGEL K V I H K S 2 0 0 0 0 1 0 0 1 1 1 1 0 0 0 2 0 0 2 2 0 0 13 0 1477.7929 P35579;Q5BKV1 P35579 187 199 MYH9 Myosin-9 yes no 3 0.0092766 45.115 By MS/MS By matching By MS/MS 1 1 1 1003700 514900 260430 228420 3329 1221 3537 10404;10405;10406 7279;7280 7280 2 VISGTTLGYLSPK EMEASRHKVISGTTLG TLGYLSPKDMNQPSSS K V I P K D 0 0 0 0 0 0 0 2 0 1 2 1 0 0 1 2 2 0 1 1 0 0 13 0 1334.7446 H0YBY0;G5EA18;A0A0A0MTC4;A0A0A0MTD1;F8VPI7;E7EPX0;A0A0A0MTC6;E7EVJ4;E9PH62;A0A0A0MTC5;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 43 55 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 yes no 2 0.0061576 63.16 By MS/MS By matching By matching 1 1 1 2809200 1043000 1033900 732350 3330 165 3538 10407;10408;10409 7281 7281 226 1 VIYDFIEK LKDRETSKVIYDFIEK VIYDFIEKTGGVEAVK K V I E K T 0 0 0 1 0 0 1 0 0 2 0 1 0 1 0 0 0 0 1 1 0 0 8 0 1025.5433 O00401 O00401 254 261 WASL Neural Wiskott-Aldrich syndrome protein yes yes 2 0.0091413 133.12 By MS/MS By MS/MS By matching 1 1 1 19759000 6942200 6840000 5976900 3331 976 3539 10410;10411;10412 7282;7283 7283 3737 2 VIYSQPSAR KKGTSSKKVIYSQPSA IYSQPSARSEGEFKQT K V I A R S 1 1 0 0 0 1 0 0 0 1 0 0 0 0 1 2 0 0 1 1 0 0 9 0 1019.54 A0A087WY82;Q9Y624 A0A087WY82 258 266 F11R Junctional adhesion molecule A yes no 2 0.0083661 77.732 By MS/MS By MS/MS 1 1 1487500 686600 800950 0 3332 78 3540 10413;10414 7284;7285 7285 3582 2 VKAQTPPGPSLSGSKSPCPQEK GSISPYPKVKAQTPPG KSPCPQEKSKDSLVQS K V K E K S 1 0 0 0 1 2 1 2 0 0 1 3 0 0 5 4 1 0 0 1 0 0 22 2 2279.158 Q9UQ35 Q9UQ35 999 1020 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 3 0.0016681 50.493 By MS/MS By matching 1 1 3255300 2798300 457010 0 3333 1945 3541 10415;10416 7286 7286 2751;2752;2753;3538 1 VKLDDDSDDDEESKEGQESSSSAANTNPAVAPPCVVVEEK LLPLEKNRVKLDDDSD PCVVVEEKKPQLTQEE R V K E K K 4 0 2 6 1 1 6 1 0 0 1 3 0 0 3 6 1 0 0 5 0 0 40 2 4246.8819 Q12872 Q12872 598 637 SFSWAP Splicing factor, suppressor of white-apricot homolog yes yes 4 1.7869E-06 45.47 By MS/MS By matching By matching 1 1 1 11991000 4956500 3194600 3840200 3334 1366 3542 10417;10418;10419 7287 7287 1800 1 VKTLMEFITSR ISVEQDGKVKTLMEFI LMEFITSRKRGPLWNH K V K S R K 0 1 0 0 0 0 1 0 0 1 1 1 1 1 0 1 2 0 0 1 0 0 11 1 1323.7221 H0Y9X0;O94915 H0Y9X0 620 630 FRYL Protein furry homolog-like yes no 2 0.0079595 56.956 By MS/MS 1 0 0 0 0 3335 776 3543 10420 7288 7288 1059;3166;3167 1 VLAETPDSFEK EVAESPLRVLAETPDS ETPDSFEKHIRSILQR R V L E K H 1 0 0 1 0 0 2 0 0 0 1 1 0 1 1 1 1 0 0 1 0 0 11 0 1234.6081 J3KMX1;Q99567 J3KMX1 460 470 NUP88 Nuclear pore complex protein Nup88 yes no 2 0.016788 71.241 By MS/MS By matching By matching 1 1 1 1602600 440640 692220 469710 3336 896 3544 10421;10422;10423 7289 7289 3208 1 VLAPILPDNFSTPTGSR PDSPWRERVLAPILPD FSTPTGSRTDSQSVRH R V L S R T 1 1 1 1 0 0 0 1 0 1 2 0 0 1 3 2 2 0 0 1 0 0 17 0 1783.9468 Q9NQS7 Q9NQS7 281 297 INCENP Inner centromere protein yes yes 2 0.012174 46.796 By matching By matching By MS/MS 1 1 1 831700 403460 202450 225780 3337 1846 3545 10424;10425;10426 7290 7290 2593;3508 1 VLATLCGQESTDTER VKLSSGAKVLATLCGQ QESTDTERAPGKDTFY K V L E R A 1 1 0 1 1 1 2 1 0 0 2 0 0 0 0 1 3 0 0 1 0 0 15 0 1678.7832 O00187 O00187 85 99 MASP2 Mannan-binding lectin serine protease 2;Mannan-binding lectin serine protease 2 A chain;Mannan-binding lectin serine protease 2 B chain yes yes 2 0.0085516 43.69 By matching By MS/MS By matching 1 1 1 5553600 1689400 2026400 1837800 3338 969 3546 10427;10428;10429 7291 7291 3230;3231 1 VLDDVSIRSPETK NKLYPKDRVLDDVSIR SIRSPETKCPKQNSIE R V L T K C 0 1 0 2 0 0 1 0 0 1 1 1 0 0 1 2 1 0 0 2 0 0 13 1 1457.7726 F5GXF5;E7ETD6;Q12830 F5GXF5 1229 1241 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.014931 57.679 By matching By MS/MS By matching 1 1 1 3504500 1183600 1179400 1141400 3339 542 3547 10430;10431;10432 7292 7292 701 1 VLDSSYGITK SEKELNFRVLDSSYGI DSSYGITKSLENIYSE R V L T K S 0 0 0 1 0 0 0 1 0 1 1 1 0 0 0 2 1 0 1 1 0 0 10 0 1081.5655 Q68D51 Q68D51 180 189 DENND2C DENN domain-containing protein 2C yes yes 2 9.1266E-05 114.89 By matching By MS/MS By MS/MS 1 1 1 1124600 352350 406550 365720 3340 1529 3548 10433;10434;10435 7293;7294 7293 2081 2 VLDTSSLTQSAPASPTNK TVNARPQRVLDTSSLT APASPTNKGVHIHQAG R V L N K G 2 0 1 1 0 1 0 0 0 0 2 1 0 0 2 4 3 0 0 1 0 0 18 0 1815.9214 Q8N122;I3L436 Q8N122 850 867 RPTOR Regulatory-associated protein of mTOR yes no 2 0.010953 48.14 By MS/MS By matching By matching 1 1 1 21132000 7978900 7777800 5374900 3341 1622 3549 10436;10437;10438 7295 7295 2223 1 VLEDDPEAAYTTR VSDFGLSRVLEDDPEA PEAAYTTRGGKIPIRW R V L T R G 2 1 0 2 0 0 2 0 0 0 1 0 0 0 1 0 2 0 1 1 0 0 13 0 1478.6889 F8W9W0;C9JXA2;E9PG71;F8VP57;B7ZKW7;B7ZKJ3;P29320;P54764;P54756 F8W9W0 661 673 EPHA5;EPHA3;EPHA4 Receptor protein-tyrosine kinase;Ephrin type-A receptor 3;Ephrin type-A receptor 4;Ephrin type-A receptor 5 yes no 2 0.00010753 96.342 By MS/MS By MS/MS By MS/MS 1 1 1 24488000 8319200 7810600 8357800 3342 381 3550 10439;10440;10441 7296;7297;7298 7297 3008;3009;3638 3 VLEDDPEATYTTSGGK VSDFGLSRVLEDDPEA TYTTSGGKIPIRWTAP R V L G K I 1 0 0 2 0 0 2 2 0 0 1 1 0 0 1 1 3 0 1 1 0 0 16 0 1681.7683 P29317 P29317 763 778 EPHA2 Ephrin type-A receptor 2 yes yes 2 0.0084936 67.456 By matching By MS/MS 1 1 1640500 767720 872750 0 3343 1203 3551 10442;10443 7299 7299 3309 1 VLGAFSDGLAHLDNLK KVKAHGKKVLGAFSDG LAHLDNLKGTFATLS_ K V L L K G 2 0 1 2 0 0 0 2 1 0 4 1 0 1 0 1 0 0 0 1 0 0 16 0 1668.8835 F8W6P5;E9PEW8;E9PFT6;P68871;P02042 F8W6P5 68 83 HBB;HBD Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta yes no 3 0.0014505 55.213 By MS/MS By matching By matching 1 1 1 1037200 578710 229730 228760 + 3344 571 3552 10444;10445;10446 7300 7300 1 VLGSEGEEEDEALSPAK RPGRKAARVLGSEGEE DEALSPAKGQKPALDC R V L A K G 2 0 0 1 0 0 5 2 0 0 2 1 0 0 1 2 0 0 0 1 0 0 17 0 1758.816 M0R0Q7;P18858;M0QY71;M0R1G7;B4E135;F5GZ28 M0R0Q7 63 79 LIG1 DNA ligase;DNA ligase 1 yes no 2 0.0026626 58.674 By MS/MS By MS/MS By MS/MS 2 2 2 27930000 8162800 10975000 8791400 3345 967 3553;3554 10447;10448;10449;10450;10451;10452 7301;7302;7303;7304 7301 1278;1279 4 VLKEPVNLEGDDTSLIHGK SVTYKRGRVLKEPVNL DTSLIHGKIPSEMPSP R V L G K I 0 0 1 2 0 0 2 2 1 1 3 2 0 0 1 1 1 0 0 2 0 0 19 1 2063.0899 Q9H2J7 Q9H2J7 662 680 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 yes yes 3 0.00074332 75.054 By matching By MS/MS By matching 1 1 1 3788600 1633000 1068300 1087300 3346 1817 3555 10453;10454;10455 7305 7305 2550 1 VLPGVDALSNI SLELLEGKVLPGVDAL GVDALSNI________ K V L N I - 1 0 1 1 0 0 0 1 0 1 2 0 0 0 1 1 0 0 0 2 0 0 11 0 1096.6128 P00558 P00558 407 417 PGK1 Phosphoglycerate kinase 1 yes yes 2 0.018711 57.047 By MS/MS 1 1251900 0 1251900 0 3347 1081 3556 10456 7306 7306 1 VLQATVVAVGSGSK LPEKSQGKVLQATVVA VAVGSGSKGKGGEIQP K V L S K G 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 2 1 0 0 4 0 0 14 0 1314.7507 B8ZZL8;S4R3N1;P61604 B8ZZL8 41 54 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial yes no 2 0.0022598 76.655 By MS/MS By matching By matching 1 1 1 1919000 526360 1077600 315080 3348 386 3557 10457;10458;10459 7307 7307 1 VLSPPHIK SSSATKQKVLSPPHIK VLSPPHIKADFNLADF K V L I K A 0 0 0 0 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 1 0 0 8 0 889.53854 A0A0D9SG79;Q9NZ09 A0A0D9SG79 170 177 UBAP1 Ubiquitin-associated protein 1 yes no 2 0.011765 94.692 By MS/MS By MS/MS 1 1 1547900 668830 0 879110 3349 218 3558 10460;10461 7308;7309 7308 301 2 VLSPPKLNEVSSDANR FGQNMSERVLSPPKLN EVSSDANRENAAAESG R V L N R E 1 1 2 1 0 0 1 0 0 0 2 1 0 0 2 3 0 0 0 2 0 0 16 1 1724.9057 K7ESQ0;B7Z7F3;Q9H6Z4 K7ESQ0 50 65 RANBP3 Ran-binding protein 3 yes no 3 1.5311E-07 93.684 By MS/MS By MS/MS By MS/MS 1 1 1 3347500 1369200 1138100 840230 3350 374 3559 10462;10463;10464 7310;7311;7312;7313 7310 499 4 VLSSTSEEDEPGVVK KALKPIERVLSSTSEE EDEPGVVKFLKMNCRY R V L V K F 0 0 0 1 0 0 3 1 0 0 1 1 0 0 1 3 1 0 0 3 0 0 15 0 1574.7675 Q8NI08 Q8NI08 206 220 NCOA7 Nuclear receptor coactivator 7 yes yes 2 0.017284 45.614 By MS/MS By matching By matching 1 1 1 1384500 408930 535890 439660 3351 1664 3560 10465;10466;10467 7314 7314 2282 1 VLTAKASTDL TCNSARIRVLTAKAST TAKASTDL________ R V L D L - 2 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 2 0 0 1 0 0 10 1 1017.5706 A0A087WZF1;Q93052 A0A087WZF1 581 590 LPP Lipoma-preferred partner yes no 2 0.0048139 80.17 By matching By MS/MS By MS/MS 1 1 1 1590200 520340 493590 576290 3352 84 3561 10468;10469;10470 7315;7316 7316 101;2890 2 VLTANSNPSSPSAAK KRSRVTDKVLTANSNP PSSPSAAKRRRT____ K V L A K R 3 0 2 0 0 0 0 0 0 0 1 1 0 0 2 4 1 0 0 1 0 0 15 0 1442.7365 Q9NV56 Q9NV56 186 200 MRGBP MRG/MORF4L-binding protein yes yes 2 4.6328E-07 95.854 By matching By MS/MS By matching 1 1 1 6776300 2361100 2501600 1913600 3353 1863 3562 10471;10472;10473 7317 7317 2631 1 VLTPELYAELR AHNNHMAKVLTPELYA PELYAELRAKSTPSGF K V L L R A 1 1 0 0 0 0 2 0 0 0 3 0 0 0 1 0 1 0 1 1 0 0 11 0 1302.7184 G3V4N7;P12277;G3V461 G3V4N7 33 43 CKB Creatine kinase B-type yes no 2 0.012693 63.076 By MS/MS By matching By MS/MS 1 1 1 1840800 532370 1110500 197960 3354 722 3563 10474;10475;10476 7318;7319 7319 2 VLVVVTDGR GMRKNVPKVLVVVTDG LVVVTDGRSQDEVKKA K V L G R S 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 4 0 0 9 0 956.56548 D6RGG3;Q99715;A0A087X0A8;H0Y5N9 D6RGG3 2428 2436 COL12A1 Collagen alpha-1(XII) chain yes no 2 0.013337 75.738 By MS/MS By matching 1 1 1241000 882500 0 358470 3355 497 3564 10477;10478 7320 7320 1 VLYYMEK SQQDDSMRVLYYMEKE RVLYYMEKELANFDPS R V L E K E 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 2 1 0 0 7 0 944.46774 S4R3V8;Q86X29 S4R3V8 356 362 LSR Lipolysis-stimulated lipoprotein receptor yes no 2 0.012036 58.167 By MS/MS By matching 1 1 647310 0 359840 287480 3356 1600 3565 10479;10480 7321 7321 3870;3871 1 VMCRSSTLRWVK RIHLPAPRVMCRSSTL SSTLRWVKRRCTRFCS R V M V K R 0 2 0 0 1 0 0 0 0 0 1 1 1 0 0 2 1 1 0 2 0 0 12 2 1521.7908 Q9Y2B4 Q9Y2B4 225 236 TP53TG5 TP53-target gene 5 protein yes yes 2 0.0072981 58.172 By MS/MS By matching By matching 1 1 1 4715700 1483600 1696500 1535600 3357 1952 3566 10481;10482;10483 7322 7322 2784;2785;3550 0 VMDSDEDDDY TVKFNRRKVMDSDEDD DSDEDDDY________ K V M D Y - 0 0 0 5 0 0 1 0 0 0 0 0 1 0 0 1 0 0 1 1 0 0 10 0 1202.3921 K7EQA1;O14737 K7EQA1 78 87 PDCD5 Programmed cell death protein 5 yes no 2 0.013019 64.841 By MS/MS 1 0 0 0 0 3358 950 3567 10484 7323 7323 1255 1 VMEGTVAAQDEFYR CTRLIKPKVMEGTVAA AAQDEFYRSGWALNMK K V M Y R S 2 1 0 1 0 1 2 1 0 0 0 0 1 1 0 0 1 0 1 2 0 0 14 0 1614.7348 P41240 P41240 172 185 CSK Tyrosine-protein kinase CSK yes yes 2 0.00697 47.894 By matching By matching By MS/MS 2 2 2 6619700 1901600 2415100 2302900 3359 1236 3568;3569 10485;10486;10487;10488;10489;10490 7324;7325 7324 115 3784 2 VMTIPYQPMPASSPVICAGGQDR LSQSPQGRVMTIPYQP ICAGGQDRCSDAAGYP R V M D R C 2 1 0 1 1 2 0 2 0 2 0 0 2 0 4 2 1 0 1 2 0 0 23 0 2474.1756 Q15365 Q15365 178 200 PCBP1 Poly(rC)-binding protein 1 yes yes 3 0.0087223 71.06 By MS/MS By matching By matching 1 1 1 8819000 3941500 2027300 2850100 3360 1437 3570 10491;10492;10493 7326 7326 1926;1927 1 VNAQFLELYNEEVLDLFDTTR GLPAPDFKVNAQFLEL LDLFDTTRDIDAKSKK K V N T R D 1 1 2 2 0 1 3 0 0 0 4 0 0 2 0 0 2 0 1 2 0 0 21 0 2528.2435 A0A1B0GV47;Q7Z4S6 A0A1B0GV47 135 155 KIF21A Kinesin-like protein KIF21A yes no 3 0.0053069 40.285 By matching By MS/MS By matching 1 1 1 3820000 1576700 1225100 1018200 3361 279 3571 10494;10495;10496 7327 7327 2960;2961;3613 1 VNDAEPGSPEAPQGK RRPRRRRRVNDAEPGS SPEAPQGKRRKADGED R V N G K R 2 0 1 1 0 1 2 2 0 0 0 1 0 0 3 1 0 0 0 1 0 0 15 0 1494.6951 Q8N8A6 Q8N8A6 76 90 DDX51 ATP-dependent RNA helicase DDX51 yes yes 2 3.1291E-07 89.466 By MS/MS By MS/MS By MS/MS 1 1 1 10495000 3379400 4816100 2299900 3362 1640 3572 10497;10498;10499 7328;7329;7330;7331 7331 2246 4 VNFSEEGETEEDDQDSSHSSVTTVK EATSVQQKVNFSEEGE HSSVTTVKARSRDSDE K V N V K A 0 0 1 3 0 1 5 1 1 0 0 1 0 1 0 5 3 0 0 3 0 0 25 0 2755.158 A0A0A0MSK5;J3KN66;Q5JTV8;H0YD16 A0A0A0MSK5 91 115 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 3 5.0765E-05 67.214 By MS/MS By matching 1 1 9882000 0 5181200 4700800 3363 152 3573 10500;10501 7332 7332 205 1 VNFTVDQIR ________________ NFTVDQIRAIMDKKAN M V N I R A 0 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 0 2 0 0 9 0 1090.5771 P13639 P13639 2 10 EEF2 Elongation factor 2 yes yes 2 0.013075 71.692 By MS/MS By MS/MS By matching 1 1 1 2566500 785680 1560400 220450 3364 1154 3574 10502;10503;10504 7333;7334 7333 2 VNGDASPAAAESGAK GQENGHVKVNGDASPA AAAESGAKEELQANGS K V N A K E 5 0 1 1 0 0 1 2 0 0 0 1 0 0 1 2 0 0 0 1 0 0 15 0 1343.6317 P29966 P29966 41 55 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.0027106 63.944 By matching By MS/MS By matching 1 1 1 2168400 395580 1092400 680400 3365 1205 3575 10505;10506;10507 7335 7335 1562 1 VNHLYSDLSDALVIFQLYEK NSLGVNPRVNHLYSDL VIFQLYEKIKVPVDWN R V N E K I 1 0 1 2 0 1 1 0 1 1 4 1 0 1 0 2 0 0 2 2 0 0 20 0 2366.2158 P13796 P13796 413 432 LCP1 Plastin-2 yes yes 3 1.1414E-08 85.737 By MS/MS By matching By matching 1 1 1 4774400 2040600 1293400 1440400 3366 1156 3576 10508;10509;10510 7336 7336 1 VNLEESSGVENSPAGARPK VLDFHLNRVNLEESSG SPAGARPKRKNKKSYD R V N P K R 2 1 2 0 0 0 3 2 0 0 1 1 0 0 2 3 0 0 0 2 0 0 19 1 1939.9599 Q8WVM8 Q8WVM8 292 310 SCFD1 Sec1 family domain-containing protein 1 yes yes 2;3 5.3755E-05 79.416 By MS/MS By MS/MS By MS/MS 2 2 2 19809000 7050100 6889900 5869100 3367 1683 3577 10511;10512;10513;10514;10515;10516 7337;7338;7339 7339 2309 3 VNNGIRDFSTSVTPK KNGQVIVKVNNGIRDF FSTSVTPKQSLCDGRW K V N P K Q 0 1 2 1 0 0 0 1 0 1 0 1 0 1 1 2 2 0 0 2 0 0 15 1 1633.8424 A0A0A0MTC7;A0A0A0MQS9;Q16363 A0A0A0MTC7 1702 1716 LAMA4 Laminin subunit alpha-4 yes no 2 0.011637 41.621 By MS/MS By matching 1 1 2292900 983560 1309400 0 3368 124 3578 10517;10518 7340 7340 164;165;2910 1 VNQIGSVTESLQACK SCNCLLLKVNQIGSVT TESLQACKLAQANGWG K V N C K L 1 0 1 0 1 2 1 1 0 1 1 1 0 0 0 2 1 0 0 2 0 0 15 0 1632.8141 P06733 P06733 344 358 ENO1 Alpha-enolase yes yes 2 0.0034142 68.069 By matching By matching By MS/MS 1 1 1 3399500 876140 2159300 364080 3369 1113 3579 10519;10520;10521 7341 7341 1 VNQSALEAVTPSPSFQQR NPEETAARVNQSALEA PSPSFQQRHESLRPAA R V N Q R H 2 1 1 0 0 3 1 0 0 0 1 0 0 1 2 3 1 0 0 2 0 0 18 0 1957.9858 Q9UKG1 Q9UKG1 390 407 APPL1 DCC-interacting protein 13-alpha yes yes 2 0.013694 46.121 By matching By MS/MS 1 1 1479600 840060 0 639570 3370 1915 3580 10522;10523 7342 7342 2703 1 VNSGDTEVGSSLLR VKAIPRRRVNSGDTEV EVGSSLLRHPSPELSR R V N L R H 0 1 1 1 0 0 1 2 0 0 2 0 0 0 0 3 1 0 0 2 0 0 14 0 1432.7158 O75592 O75592 3465 3478 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes yes 2 2.9214E-05 96.247 By MS/MS By MS/MS By MS/MS 1 1 1 6095600 2471300 1919200 1705100 3371 1037 3581 10524;10525;10526 7343;7344;7345 7343 1395 3 VNSTMTTLQVLTLLLNKFR YGSVTNVRVNSTMTTL TLLLNKFRVEDGPSEF R V N F R V 0 1 2 0 0 1 0 0 0 0 5 1 1 1 0 1 4 0 0 2 0 0 19 1 2191.2399 Q9H2L5 Q9H2L5 193 211 RASSF4 Ras association domain-containing protein 4 yes yes 3 0.0044061 41.912 By MS/MS By matching By matching 1 1 1 8902700 3778400 2658400 2465900 3372 1818 3582 10527;10528;10529 7346 7346 106 166 3500;3501 1 VPAKLSPMK SHTKSLPKVPAKLSPM PAKLSPMKQAQLRNFL K V P M K Q 1 0 0 0 0 0 0 0 0 0 1 2 1 0 2 1 0 0 0 1 0 0 9 1 969.56812 P35658;A0A0A0MSW3 P35658 935 943 NUP214 Nuclear pore complex protein Nup214 yes no 2 0.0058999 113.67 By matching By MS/MS By MS/MS 1 1 1 4523400 1505600 1612100 1405700 3373 1223 3583 10530;10531;10532 7347;7348 7347 1582 2 VPKPEPIPEPKEPSPEK TSTSDILKVPKPEPIP PKEPSPEKNSKKEKEK K V P E K N 0 0 0 0 0 0 4 0 0 1 0 3 0 0 7 1 0 0 0 1 0 0 17 2 1897.0197 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 247 263 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 3 0.01725 52.026 By matching By MS/MS 1 1 2522200 289460 2232700 0 3374 322 3584 10533;10534 7349 7349 451 1 VPKSPEHSAEPIR KAEGKVERVPKSPEHS EHSAEPIRTFIKAKEY R V P I R T 1 1 0 0 0 0 2 0 1 1 0 1 0 0 3 2 0 0 0 1 0 0 13 1 1445.7627 Q9ULH0 Q9ULH0 1552 1564 KIDINS220 Kinase D-interacting substrate of 220 kDa yes yes 3 0.0073456 56.851 By MS/MS 1 2859600 0 2859600 0 3375 1924 3585 10535 7350 7350 2718 1 VPPAPVPCPPPSPGPSAVPSSPK PSEKVEVKVPPAPVPC SAVPSSPKSVATEERA K V P P K S 2 0 0 0 1 0 0 1 0 0 0 1 0 0 11 4 0 0 0 3 0 0 23 0 2218.1456 O95817 O95817 366 388 BAG3 BAG family molecular chaperone regulator 3 yes yes 3 0.0057437 45.941 By matching By MS/MS 1 1 1861000 0 995780 865180 3376 1074 3586 10536;10537 7351 7351 1444;1445 1 VPSAPGQESPIPDPK PPEMVGQRVPSAPGQE ESPIPDPKLMPHMKNE R V P P K L 1 0 0 1 0 1 1 1 0 1 0 1 0 0 5 2 0 0 0 1 0 0 15 0 1517.7726 E9PGC8;P78559 E9PGC8 2048 2062 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 2 0.012699 48.405 By MS/MS By matching By matching 1 1 1 2139200 877750 666960 594520 3377 582 3587 10538;10539;10540 7352 7352 767 1 VPSVESLFR FAQKLQLRVPSVESLF PSVESLFRSPIKESLF R V P F R S 0 1 0 0 0 0 1 0 0 0 1 0 0 1 1 2 0 0 0 2 0 0 9 0 1032.5604 E7EVX2;Q86W71;Q13439 E7EVX2 91 99 GOLGA4 Golgin subfamily A member 4 no no 2 0.015151 63.408 By matching By MS/MS By MS/MS 1 1 1 6908300 2542200 1970600 2395600 3378 553;1390 3588 10541;10542;10543 7353;7354 7353 736 2 VPTAIHQLYLDSNK ILRKMPPRVPTAIHQL QLYLDSNKIETIPNGY R V P N K I 1 0 1 1 0 1 0 0 1 1 2 1 0 0 1 1 1 0 1 1 0 0 14 0 1597.8464 P51888 P51888 240 253 PRELP Prolargin yes yes 3 0.013452 39.961 By MS/MS By matching By matching 1 1 1 1380900 919110 246780 215040 3379 1281 3589 10544;10545;10546 7355 7355 1 VPTANVSVVDLTCR KLTGMAFRVPTANVSV SVVDLTCRLEKPAKYD R V P C R L 1 1 1 1 1 0 0 0 0 0 1 0 0 0 1 1 2 0 0 4 0 0 14 0 1529.7872 P04406;E7EUT5 P04406 235 248 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 1.0663E-16 136.27 By matching By MS/MS By matching 1 1 1 4372800 1083000 2866800 422960 3380 1103 3590 10547;10548;10549 7356 7356 1 VPVDPATYGQFYGGDSYIILYNYR WRIEGSNKVPVDPATY YIILYNYRHGGRQGQI K V P Y R H 1 1 1 2 0 1 0 3 0 2 1 0 0 1 2 1 1 0 5 2 0 0 24 0 2770.3279 A0A0A0MS51;A0A0A0MT01;CON__Q3SX14;P06396 A0A0A0MS51 424 447 GSN Gelsolin yes no 3 8.4261E-26 80.277 By MS/MS By MS/MS 1 1 10020000 0 5574200 4445500 + 3381 144 3591 10550;10551 7357;7358 7358 2 VPVLISPTLK LPTTHNHKVPVLISPT VLISPTLKHTPADVQL K V P L K H 0 0 0 0 0 0 0 0 0 1 2 1 0 0 2 1 1 0 0 2 0 0 10 0 1065.6798 P42684 P42684 931 940 ABL2 Abelson tyrosine-protein kinase 2 yes yes 2 0.0044611 71.085 By MS/MS By matching By matching 1 1 1 6164000 2240400 2198000 1725600 3382 1238 3592 10552;10553;10554 7359 7359 1599 1 VPVPESPAFSR RPSTRFLKVPVPESPA PESPAFSRHADPAHQL K V P S R H 1 1 0 0 0 0 1 0 0 0 0 0 0 1 3 2 0 0 0 2 0 0 11 0 1184.619 A4D1S0 A4D1S0 153 163 KLRG2 Killer cell lectin-like receptor subfamily G member 2 yes yes 2 0.0014192 87.001 By matching By MS/MS By matching 1 1 1 1414800 405770 560200 448810 3383 302 3593 10555;10556;10557 7360 7360 401 1 VQAGPGSPR GRGAAVSRVQAGPGSP QAGPGSPRRARGRQQV R V Q P R R 1 1 0 0 0 1 0 2 0 0 0 0 0 0 2 1 0 0 0 1 0 0 9 0 867.45626 I3L4F6;I3L0U5;Q6PK04 I3L4F6 12 20 CCDC137 Coiled-coil domain-containing protein 137 yes no 2 0.0033002 87.568 By MS/MS By MS/MS 1 2 2221400 0 1169500 1051800 3384 882 3594 10558;10559;10560 7361;7362;7363 7361 1187 3 VQAMQISSEKEEDDNEKR EVDYSGLRVQAMQISS EEDDNEKRQDPGDNWE R V Q K R Q 1 1 1 2 0 2 4 0 0 1 0 2 1 0 0 2 0 0 0 1 0 0 18 2 2134.9801 Q9UKY7;H0Y8K3 Q9UKY7 100 117 CDV3 Protein CDV3 homolog yes no 3 0.0059297 66.826 By matching By MS/MS By matching 1 1 1 3414700 1153600 1423300 837810 3385 1920 3595 10561;10562;10563 7364 7364 2712 1 VQAYEEPSVASSPNGK LTQDWESRVQAYEEPS VASSPNGKESDLRRSE R V Q G K E 2 0 1 0 0 1 2 1 0 0 0 1 0 0 2 3 0 0 1 2 0 0 16 0 1661.7897 Q99575 Q99575 719 734 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 2 2.227E-17 115.68 By MS/MS By MS/MS By MS/MS 2 1 2 20575000 8250200 6765200 5559800 3386 1767 3596;3597 10564;10565;10566;10567;10568 7365;7366;7367;7368 7365 103 2452;2453;2454 4 VQAYEEPSVASSPNGKESDLR LTQDWESRVQAYEEPS NGKESDLRRSEVPCAP R V Q L R R 2 1 1 1 0 1 3 1 0 0 1 1 0 0 2 4 0 0 1 2 0 0 21 1 2262.0764 Q99575 Q99575 719 739 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 3 0.00042278 72.935 By MS/MS By MS/MS By matching 1 2 1 16514000 4833000 8994500 2686600 3387 1767 3598;3599 10569;10570;10571;10572 7369;7370;7371;7372 7369 103 2452;2453;2454 4 VQEHEDSGDSEVENEAK LRRLRGPRVQEHEDSG SEVENEAKGNFPPQKK R V Q A K G 1 0 1 2 0 1 5 1 1 0 0 1 0 0 0 2 0 0 0 2 0 0 17 0 1900.7923 Q9Y5J1 Q9Y5J1 115 131 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 2;3 1.5371E-22 111.31 By MS/MS By MS/MS By MS/MS 2 2 3 20315000 4641400 9596000 6077400 3388 1972 3600;3601 10573;10574;10575;10576;10577;10578;10579 7373;7374;7375;7376 7376 2819;2820 4 VQEKPDSPGGSTQIQR SKPCGSPRVQEKPDSP GGSTQIQRYLDAERLA R V Q Q R Y 0 1 0 1 0 3 1 2 0 1 0 1 0 0 2 2 1 0 0 1 0 0 16 1 1725.8646 M0R300;M0R0P8;Q13459 M0R300 1284 1299 MYO9B Unconventional myosin-IXb yes no 2;3 0.0016809 72.819 By MS/MS By MS/MS By matching 2 2 2 11016000 4422800 4323300 2270200 3389 966 3602 10580;10581;10582;10583;10584;10585 7377;7378 7377 1274 2 VQGSPLKK LSSQERMKVQGSPLKK VQGSPLKKLFTSTGLK K V Q K K L 0 0 0 0 0 1 0 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 8 1 855.5178 Q02952 Q02952 511 518 AKAP12 A-kinase anchor protein 12 yes yes 2 0.01693 96.665 By matching By matching By MS/MS 1 1 1 2930500 1322700 817310 790530 3390 1336 3603 10586;10587;10588 7379 7379 1751 1 VQISPDSGGLPER IQQDSGCKVQISPDSG DSGGLPERSVSLTGAP K V Q E R S 0 1 0 1 0 1 1 2 0 1 1 0 0 0 2 2 0 0 0 1 0 0 13 0 1353.6888 M0QXW7;M0QYH3;A0A087WTP3;Q92945 M0QXW7 34 46 KHSRP Far upstream element-binding protein 2 yes no 2 0.00062715 69.451 By MS/MS By MS/MS By matching 2 2 1 17539000 6328100 6543600 4667400 3391 25 3604;3605 10589;10590;10591;10592;10593 7380;7381;7382 7382 27 2 VQMQVRNSK KQMEKFRKVQMQVRNS QMQVRNSKASFDKLKM K V Q S K A 0 1 1 0 0 2 0 0 0 0 0 1 1 0 0 1 0 0 0 2 0 0 9 1 1088.5761 F8WBQ1;Q8NDH6 F8WBQ1 187 195 ICA1L Islet cell autoantigen 1-like protein yes no 2 0.0088808 63.624 By MS/MS 1 0 0 0 0 3392 697 3606 10594 7383 7383 935 1 VQMTSPSSTGSPMFK SSQALTNKVQMTSPSS STGSPMFKFSSPIVKS K V Q F K F 0 0 0 0 0 1 0 1 0 0 0 1 2 1 2 4 2 0 0 1 0 0 15 0 1583.7324 P49790 P49790 512 526 NUP153 Nuclear pore complex protein Nup153 yes yes 2 0.0035916 60.949 By matching By MS/MS By MS/MS 3 3 3 9863700 2960900 3621900 3281000 3393 1260 3607;3608 10595;10596;10597;10598;10599;10600;10601;10602;10603 7384;7385;7386;7387 7385 120;121 1660;1661;1662;3332 3 VQRAAVDSSR MISQAETRVQRAAVDS RAAVDSSRTTLQLEET R V Q S R T 2 2 0 1 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 10 1 1087.5734 A0A087WU51;Q6ZTR7 A0A087WU51 55 64 FAM92B Protein FAM92B yes no 2 0.0028198 85.064 By MS/MS By matching 1 1 2763900 0 1479300 1284600 3394 34 3609 10604;10605 7388 7388 36 1 VQSLEGEKLSPK YASLTSEKVQSLEGEK EGEKLSPKSDISPLTP K V Q P K S 0 0 0 0 0 1 2 1 0 0 2 2 0 0 1 2 0 0 0 1 0 0 12 1 1313.7191 P46821 P46821 1770 1781 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 2 0.0062003 71.529 By matching By MS/MS By matching 1 1 1 6256400 1969500 2462200 1824800 3395 1245 3610 10606;10607;10608 7389 7389 1629 1 VQSPEPPAPER RRHQERLRVQSPEPPA PEPPAPERALSPAELR R V Q E R A 1 1 0 0 0 1 2 0 0 0 0 0 0 0 4 1 0 0 0 1 0 0 11 0 1205.6041 A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;Q14160;H0YCG0 A0A0G2JMS7 1392 1402 SCRIB Protein scribble homolog yes no 2 0.0021824 84.297 By MS/MS By MS/MS By matching 1 1 1 4121100 1248700 1657800 1214700 3396 226 3611 10609;10610;10611 7390;7391 7390 312 2 VQTTPSKPGGDR TPGKSSSKVQTTPSKP PSKPGGDRYIPHRSAA K V Q D R Y 0 1 0 1 0 1 0 2 0 0 0 1 0 0 2 1 2 0 0 1 0 0 12 1 1241.6364 Q12834 Q12834 67 78 CDC20 Cell division cycle protein 20 homolog yes yes 2 1.8025E-07 115.34 By MS/MS By matching By MS/MS 1 1 1 3900200 1576900 1362300 960960 3397 1365 3612 10612;10613;10614 7392;7393 7392 3358 2 VRYSLDPENPTKSCK ________________ ENPTKSCKSRGSNLRV M V R C K S 0 1 1 1 1 0 1 0 0 0 1 2 0 0 2 2 1 0 1 1 0 0 15 2 1792.8778 J3KSJ0;A0A087WY81;J3KRB3;A0A087WWH0;J3QS96;A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621 J3KSJ0 2 16 RPL17;RPL17-C18orf32 60S ribosomal protein L17 yes no 3 0.0098663 44.968 By MS/MS 1 461360 0 461360 0 3398 61 3613 10615 7394 7394 78;3577 0 VSAGEPGSHPSPAPR CRRGKEPKVSAGEPGS SHPSPAPRRSPAGNKQ K V S P R R 2 1 0 0 0 0 1 2 1 0 0 0 0 0 4 3 0 0 0 1 0 0 15 0 1444.7059 A0A1B0GV68;C9JME2;Q9Y4F1 A0A1B0GV68 417 431 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 2 0.0075208 52.527 By MS/MS By MS/MS By matching 1 1 1 5426300 2183900 1709000 1533400 3399 281 3614 10616;10617;10618 7395;7396 7396 373 2 VSCHDSDDDIMR IGLGIKNRVSCHDSDD DSDDDIMRNDREYDSG R V S M R N 0 1 0 4 1 0 0 0 1 1 0 0 1 0 0 2 0 0 0 1 0 0 12 0 1448.566 Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4 360 371 NOL8 Nucleolar protein 8 yes no 2 0.0064465 65.295 By matching By matching By MS/MS 1 1 1 2211900 506700 923400 781770 3400 1570 3615 10619;10620;10621 7397 7397 2134 1 VSDQNSPVLPK AYMLFYQRVSDQNSPV QNSPVLPKKSRVSVVR R V S P K K 0 0 1 1 0 1 0 0 0 0 1 1 0 0 2 2 0 0 0 2 0 0 11 0 1182.6245 Q9UPU5 Q9UPU5 2042 2052 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 9.2343E-23 148.89 By MS/MS By MS/MS By MS/MS 1 1 1 39466000 14555000 13680000 11230000 3401 1941 3616 10622;10623;10624 7398;7399;7400 7399 2747 3 VSGAGFSPSSK FGIIGNDRVSGAGFSP AGFSPSSKMEGGHFVP R V S S K M 1 0 0 0 0 0 0 2 0 0 0 1 0 1 1 4 0 0 0 1 0 0 11 0 1022.5033 Q9C0C2 Q9C0C2 1132 1142 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0027602 73.881 By MS/MS By MS/MS 1 1 1947100 0 1017000 930080 3402 1804 3617 10625;10626 7401;7402 7402 2517;2518 2 VSGRTSPPLLDR VPLSAYERVSGRTSPP TSPPLLDRARSRTPPS R V S D R A 0 2 0 1 0 0 0 1 0 0 2 0 0 0 2 2 1 0 0 1 0 0 12 1 1296.715 Q9UQ35 Q9UQ35 2393 2404 SRRM2 Serine/arginine repetitive matrix protein 2 yes yes 2 0.0052542 72.434 By MS/MS By MS/MS By MS/MS 1 1 1 22997000 7645900 8800900 6549700 3403 1945 3618 10627;10628;10629 7403;7404;7405 7405 2777 3 VSHLLGINVTDFTR PDNTAAQKVSHLLGIN INVTDFTRGILTPRIK K V S T R G 0 1 1 1 0 0 0 1 1 1 2 0 0 1 0 1 2 0 0 2 0 0 14 0 1570.8467 P35579 P35579 374 387 MYH9 Myosin-9 yes yes 3 0.016327 38.337 By matching By MS/MS By matching 1 1 1 1333800 603620 445680 284460 3404 1221 3619 10630;10631;10632 7406 7406 1 VSKMATPYMNHYMKHQK LLCPFCLKVSKMATPY NHYMKHQKKGVHRCPK K V S Q K K 1 0 1 0 0 1 0 0 2 0 0 3 3 0 1 1 1 0 2 1 0 0 17 2 2093.0009 Q8ND82 Q8ND82 450 466 ZNF280C Zinc finger protein 280C yes yes 2 0.015747 43.544 By MS/MS 1 0 0 0 0 3405 1653 3620 10633 7407 7407 3877 1 VSLAVTDTEKGSGK TLKKYIAKVSLAVTDT DTEKGSGKLLKEDKNT K V S G K L 1 0 0 1 0 0 1 2 0 0 1 2 0 0 0 2 2 0 0 2 0 0 14 1 1390.7304 Q5TZF3 Q5TZF3 194 207 ANKRD45 Ankyrin repeat domain-containing protein 45 yes yes 2 0.0099729 41.54 By matching By matching By MS/MS 1 1 1 5305700 1670400 1065100 2570200 3406 1515 3621 10634;10635;10636 7408 7408 2046;3420;3421 1 VSLEPHQGPGTPESK TTRQQRKRVSLEPHQG GPGTPESKKATSCFPR R V S S K K 0 0 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 0 15 0 1561.7736 A0A087WY61;Q14980;H0YFY6 A0A087WY61 1974 1988 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 5.8464E-11 106.44 By MS/MS By MS/MS By MS/MS 1 1 1 14082000 4875100 4539000 4668300 3407 77 3622 10637;10638;10639 7409;7410;7411 7410 2887 3 VSNLQVSPK DLEITDSKVSNLQVSP SNLQVSPKSEDISKFD K V S P K S 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 2 0 0 0 2 0 0 9 0 970.54475 A0A0C4DGF9;O00443 A0A0C4DGF9 253 261 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha yes no 2 0.0021883 107.03 By MS/MS By MS/MS 1 1 2786300 1502400 0 1283900 3408 196 3623 10640;10641 7412;7413 7413 272 2 VSPTSVPTTPR QAPTLQVKVSPTSVPT TSVPTTPRATPILQPR K V S P R A 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 2 3 0 0 2 0 0 11 0 1140.6139 A0A087X1T2;G3V0I8;Q12772 A0A087X1T2 86 96 SREBF2 Sterol regulatory element-binding protein 2;Processed sterol regulatory element-binding protein 2 yes no 2 0.01372 45.115 By MS/MS By matching 1 1 590130 253910 0 336230 3409 106 3624 10642;10643 7414 7414 2899;2900 1 VSQKSDSSAVLSETNNKAPK FTVHFLCKVSQKSDSS ETNNKAPKDKLVEKTG K V S P K D 2 0 2 1 0 1 1 0 0 0 1 3 0 0 1 5 1 0 0 2 0 0 20 2 2089.0651 E9PBC3;Q96MH7 E9PBC3 37 56 C5orf34 Uncharacterized protein C5orf34 yes no 2 0.018182 43.03 By MS/MS 1 0 0 0 0 3410 560 3625 10644 7415 7415 3079 1 VSSQSFSEIER KKGLGAQKVSSQSFSE QSFSEIERQAQVAEKL K V S E R Q 0 1 0 0 0 1 2 0 0 1 0 0 0 1 0 4 0 0 0 1 0 0 11 0 1267.6044 E9PQP3;E9PIY6;A0A0D9SF70;G5E9L0;Q8N6H7 E9PQP3 100 110 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 2 0.0057541 67.952 By MS/MS By MS/MS By MS/MS 1 1 1 1759500 673780 554000 531690 3411 214 3626 10645;10646;10647 7416;7417;7418 7416 296;297 3 VTADVINAAEK LIVRSATKVTADVINA DVINAAEKLQVVGRAG K V T E K L 3 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 2 0 0 11 0 1129.5979 Q5SZU1;O43175 Q5SZU1 25 35 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.011183 66.568 By MS/MS By MS/MS 1 1 1285500 294600 990890 0 3412 1002 3627 10648;10649 7419;7420 7419 2 VTEGTIREEQEYEEEVEEEPRPAAK GEYRPHHRVTEGTIRE EEPRPAAKVVEREEAV R V T A K V 2 2 0 0 0 1 10 1 0 1 0 1 0 0 2 0 2 0 1 2 0 0 25 2 2946.3731 O43491;H0Y5B0;E9PK52;E9PHY5;E9PMV8;Q6R5J7 O43491 762 786 EPB41L2 Band 4.1-like protein 2 yes no 4 0.00025173 53.998 By MS/MS By matching 1 1 7052900 4269200 2783700 0 3413 1012 3628 10650;10651 7421 7421 3750 1 VTLTSEEEAR NGISDLVKVTLTSEEE LTSEEEARLKKSADTL K V T A R L 1 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 2 0 0 1 0 0 10 0 1133.5564 P00338 P00338 306 315 LDHA L-lactate dehydrogenase A chain yes yes 2 0.0021333 96.034 By MS/MS By matching By matching 1 1 1 3630900 1268700 1909300 452910 3414 1077 3629 10652;10653;10654 7422 7422 1 VTMQNLNDR GLLSGNEKVTMQNLND TMQNLNDRLASYLDKV K V T D R L 0 1 2 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 9 0 1089.5237 CON__P13645;P13645;CON__Q7Z3Z0;CON__A2A4G1;CON__Q7Z3Y8;CON__Q148H6;CON__Q7Z3Y9;CON__Q9Z2K1;CON__P02533;CON__P08779;CON__Q3ZAW8;CON__Q7Z3Y7;Q7Z3Z0;Q7Z3Y8;Q7Z3Y7;Q7Z3Y9;P02533;P08779;CON__P02535-1 CON__P13645 148 156 KRT10;KRT25;KRT27;KRT28;KRT26;KRT14;KRT16 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.013137 78.77 By MS/MS 1 763050 0 763050 0 + 3415 471;465 3630 10655 7423 7423 1 VTNDISPESSPGVGR FGVESDKRVTNDISPE ESSPGVGRRRTKTPHT R V T G R R 0 1 1 1 0 0 1 2 0 1 0 0 0 0 2 3 1 0 0 2 0 0 15 0 1513.7372 A6NNN6;E7ETA6;Q15154;E5RGQ4;E9PGW9;E7EV93 A6NNN6 60 74 PCM1 Pericentriolar material 1 protein yes no 2 0.0010085 76.341 By MS/MS By MS/MS By matching 1 1 1 12750000 3928900 4600600 4220400 3416 310 3631 10656;10657;10658 7424;7425 7424 412 2 VTPPEGYEVVTVFPK CEKHARERVTPPEGYE EVVTVFPK________ R V T P K - 0 0 0 0 0 0 2 1 0 0 0 1 0 1 3 0 2 0 1 4 0 0 15 0 1660.8712 O00151 O00151 315 329 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.0088791 51.979 By MS/MS By matching By matching 1 1 1 7352700 2976400 2192300 2184000 3417 968 3632 10659;10660;10661 7426 7426 3734 1 VTQHESDNENEIQIQNK DSLEVERRVTQHESDN NEIQIQNKLKKDFPKQ R V T N K L 0 0 3 1 0 3 3 0 1 2 0 1 0 0 0 1 1 0 0 1 0 0 17 0 2024.9399 Q5VZL5 Q5VZL5 117 133 ZMYM4 Zinc finger MYM-type protein 4 yes yes 3 2.8508E-13 102.67 By MS/MS By MS/MS By MS/MS 1 1 1 26069000 9138700 10205000 6726000 3418 1525 3633 10662;10663;10664 7427;7428;7429 7429 2076 3 VTSGGVSESPSGFSK KKGAKRPRVTSGGVSE ESPSGFSKHIQSNLDF R V T S K H 0 0 0 0 0 0 1 3 0 0 0 1 0 1 1 5 1 0 0 2 0 0 15 0 1424.6783 J3KN87;E7EPP6;O14757 J3KN87 278 292 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 2.0815E-36 144.88 By MS/MS By MS/MS By MS/MS 1 2 1 19631000 6444900 7708500 5477800 3419 527 3634 10665;10666;10667;10668 7430;7431;7432;7433 7433 677 4 VTSRSGPAPARR QEVPGTPRVTSRSGPA SGPAPARRNSVTTGFH R V T R R N 2 3 0 0 0 0 0 1 0 0 0 0 0 0 2 2 1 0 0 1 0 0 12 2 1253.6953 E9PKC7;E9PEJ4;P10515 E9PKC7 34 45 DLAT Acetyltransferase component of pyruvate dehydrogenase complex;Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes no 2 0.01499 46.819 By MS/MS 1 240240 0 0 240240 3420 568 3635 10669 7434 7434 753;754;3081 0 VTSSMSSPSMQPK ETLPANFRVTSSMSSP SSPSMQPKKMQMDGNV R V T P K K 0 0 0 0 0 1 0 0 0 0 0 1 2 0 2 5 1 0 0 1 0 0 13 0 1365.6268 Q13136 Q13136 1166 1178 PPFIA1 Liprin-alpha-1 yes yes 2 0.016043 45.598 By matching By MS/MS By matching 1 1 1 1525000 481870 602800 440300 3421 1378 3636 10670;10671;10672 7435 7435 1824 0 VTSSVPLPSGSTSSPGR VTRMRCWRVTSSVPLP GSTSSPGRGRGEVRLE R V T G R G 0 1 0 0 0 0 0 2 0 0 1 0 0 0 3 6 2 0 0 2 0 0 17 0 1614.8213 Q15036 Q15036 323 339 SNX17 Sorting nexin-17 yes yes 2 1.7538E-06 88.155 By MS/MS By MS/MS 1 1 6307200 0 3568200 2739000 3422 1429 3637 10673;10674 7436;7437;7438 7436 1914;1915;1916 3 VTVSRASSSR LSPSPSSRVTVSRASS VSRASSSRSVRTTRGK R V T S R S 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 2 0 0 10 1 1048.5625 P20700 P20700 398 407 LMNB1 Lamin-B1 yes yes 2 0.0022726 103.43 By matching By matching By MS/MS 1 1 1 17133000 5604400 4446900 7081900 3423 1180 3638 10675;10676;10677 7439 7439 1531 1 VVCVGMNYVDHCKEQNVPVPK APVTRPDKVVCVGMNY EQNVPVPKEPIIFSKF K V V P K E 0 0 2 1 2 1 1 1 1 0 0 2 1 0 2 0 0 0 1 6 0 0 21 1 2471.176 Q96GK7;Q6P2I3 Q96GK7 108 128 FAHD2A;FAHD2B Fumarylacetoacetate hydrolase domain-containing protein 2A;Fumarylacetoacetate hydrolase domain-containing protein 2B yes no 2 0.010641 42.789 By matching By matching By MS/MS 1 1 1 3941600 1885600 744300 1311700 3424 1547 3639 10678;10679;10680 7440 7440 3865 1 VVDYSQFQESDDADEDYGR SRPVRNRKVVDYSQFQ DADEDYGRDSGPPTKK K V V G R D 1 1 0 5 0 2 2 1 0 0 0 0 0 1 0 2 0 0 2 2 0 0 19 0 2236.9033 Q9H1E3 Q9H1E3 10 28 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 2;3 7.1825E-83 157.11 By MS/MS By MS/MS By MS/MS 1 2 3 875610000 206050000 315850000 353700000 3425 1813 3640 10681;10682;10683;10684;10685;10686 7441;7442;7443;7444;7445;7446;7447;7448;7449;7450;7451;7452;7453 7445 2535 13 VVDYSQFQESDDADEDYGRDSGPPTKK SRPVRNRKVVDYSQFQ DSGPPTKKIRSSPREA K V V K K I 1 1 0 6 0 2 2 2 0 0 0 2 0 1 2 3 1 0 2 2 0 0 27 2 3047.3268 Q9H1E3 Q9H1E3 10 36 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes yes 3;4 1.2725E-05 69.071 By MS/MS By MS/MS By MS/MS 2 2 2 461440000 199330000 126380000 135730000 3426 1813 3641 10687;10688;10689;10690;10691;10692 7454;7455;7456;7457 7456 2535 4 VVEAVNSDSDSEFGIPK KRAPKQKKVVEAVNSD DSEFGIPKKTTTPKGK K V V P K K 1 0 1 2 0 0 2 1 0 1 0 1 0 1 1 3 0 0 0 3 0 0 17 0 1791.8527 Q02880 Q02880 1516 1532 TOP2B DNA topoisomerase 2-beta yes yes 2 0.0017903 65.179 By MS/MS By MS/MS By MS/MS 2 2 1 8738200 3592200 3169500 1976500 3427 1335 3642;3643 10693;10694;10695;10696;10697 7458;7459;7460;7461;7462 7461 1745;1746;1747 5 VVHGEDAVPYSWPWQVSLQYEK PSSHSSSRVVHGEDAV QVSLQYEKSGSFYHTC R V V E K S 1 0 0 1 0 2 2 1 1 0 1 1 0 0 2 2 0 2 2 4 0 0 22 0 2616.2649 B1AQ52;P09093 B1AQ52 29 50 CELA3A Chymotrypsin-like elastase family member 3A yes no 3 0.01846 34.615 By MS/MS 1 2282000 2282000 0 0 3428 332 3644 10698 7463 7463 1 VVIGMDVAASEFFR GKAGYTDKVVIGMDVA VAASEFFRSGKYDLDF K V V F R S 2 1 0 1 0 0 1 1 0 1 0 0 1 2 0 1 0 0 0 3 0 0 14 0 1539.7755 P06733 P06733 240 253 ENO1 Alpha-enolase yes yes 2 0.0075723 53.237 By MS/MS By matching By matching 1 1 1 1066800 516370 233260 317230 3429 1113 3645 10699;10700;10701 7464 7464 87 0 VVIHFTDGADGDLADLHR QSSPDSVKVVIHFTDG GDLADLHRASENLRQE K V V H R A 2 1 0 4 0 0 0 2 2 1 2 0 0 1 0 0 1 0 0 2 0 0 18 0 1949.9595 E7ENL6;P12111 E7ENL6 1340 1357 COL6A3 Collagen alpha-3(VI) chain yes no 3 0.00212 53.278 By MS/MS 1 414300 414300 0 0 3430 522 3646 10702 7465 7465 1 VVLIGGKPDR CCPHSTDRVVLIGGKP LIGGKPDRVVECIKII R V V D R V 0 1 0 1 0 0 0 2 0 1 1 1 0 0 1 0 0 0 0 2 0 0 10 1 1052.6342 P61978;Q5T6W2 P61978 192 201 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 0.0058199 81.525 By MS/MS 1 0 0 0 0 3431 1306 3647 10703 7466 7466 1 VVNGAAASQPPSKR KAKAGELKVVNGAAAS ASQPPSKRKRRWDQTA K V V K R K 3 1 1 0 0 1 0 1 0 0 0 1 0 0 2 2 0 0 0 2 0 0 14 1 1380.7474 O75533 O75533 183 196 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0001188 86.772 By matching By MS/MS By MS/MS 2 2 2 3197200 988080 1252900 956130 3432 1035 3648;3649 10704;10705;10706;10707;10708;10709 7467;7468;7469 7467 53 1389;1390 3 VVNTDHGSPEQLQIPVTDSGR PSGSQRARVVNTDHGS IPVTDSGRHILEDSCA R V V G R H 0 1 1 2 0 2 1 2 1 1 1 0 0 0 2 2 2 0 0 3 0 0 21 0 2248.1084 Q6IQ49 Q6IQ49 271 291 SDE2 Protein SDE2 homolog yes yes 3 0.0014097 61.087 By MS/MS By matching By matching 1 1 1 18149000 8300100 5200500 4648700 3433 1538 3650 10710;10711;10712 7470 7470 2091 1 VVPEDGSPEKR KEVQSSCRVVPEDGSP EDGSPEKRCPGGVLSC R V V K R C 0 1 0 1 0 0 2 1 0 0 0 1 0 0 2 1 0 0 0 2 0 0 11 1 1211.6146 Q02040 Q02040 531 541 AKAP17A A-kinase anchor protein 17A yes yes 2;3 6.6711E-05 101.72 By MS/MS By MS/MS By MS/MS 3 2 2 7924100 2326500 3170700 2426800 3434 1333 3651 10713;10714;10715;10716;10717;10718;10719 7471;7472;7473;7474;7475;7476 7471 1742 6 VVPGQFDDADSSDSENR YRRLLMSRVVPGQFDD DSSDSENRDLKTVKEK R V V N R D 1 1 1 4 0 1 1 1 0 0 0 0 0 1 1 3 0 0 0 2 0 0 17 0 1836.7762 E9PFQ8;Q9BRS2 E9PFQ8 11 27 RIOK1 Serine/threonine-protein kinase RIO1 yes no 2 0.0054022 52.823 By matching By MS/MS By matching 1 1 1 8354000 2236300 3443400 2674300 3435 578 3652 10720;10721;10722 7477 7477 760 1 VVPSFLPVDQGGSLVGR EGAPPEDKVVPSFLPV QGGSLVGRNGVGGMAK K V V G R N 0 1 0 1 0 1 0 3 0 0 2 0 0 1 2 2 0 0 0 4 0 0 17 0 1725.9414 Q14126 Q14126 668 684 DSG2 Desmoglein-2 yes yes 2 0.0041978 55.04 By MS/MS By matching By matching 1 1 1 6127100 2268400 1307900 2550800 3436 1402 3653 10723;10724;10725 7478 7478 1854 1 VVSEDFLQDVSASTK EVKEANIRVVSEDFLQ QDVSASTKSLQELFLA R V V T K S 1 0 0 2 0 1 1 0 0 0 1 1 0 1 0 3 1 0 0 3 0 0 15 0 1623.7992 P09874 P09874 453 467 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 1.0006E-06 93.345 By MS/MS By matching By matching 1 1 1 2719200 853970 1048700 816540 3437 1131 3654 10726;10727;10728 7479 7479 1 VVSSTSEEEEAFTEK FTGIRPARVVSSTSEE EEEAFTEKFLKINCKY R V V E K F 1 0 0 0 0 0 5 0 0 0 0 1 0 1 0 3 2 0 0 2 0 0 15 0 1670.7523 Q8N573 Q8N573 199 213 OXR1 Oxidation resistance protein 1 yes yes 2 0.00092916 78.814 By MS/MS By matching By MS/MS 1 1 1 9546400 2985100 3858400 2702900 3438 1634 3655 10729;10730;10731 7480;7481 7480 2239;2240;3458 2 VVSVLTVLHQDWLNGK EQYNSTYRVVSVLTVL HQDWLNGKEYKCKVSN R V V G K E 0 0 1 1 0 1 0 1 1 0 3 1 0 0 0 1 1 1 0 4 0 0 16 0 1806.9992 A0A0A0MS08;P01857;P01860;P01861 A0A0A0MS08 185 200 IGHG1;IGHG3;IGHG4 Ig gamma-1 chain C region;Ig gamma-3 chain C region;Ig gamma-4 chain C region yes no 2;3 4.3292E-159 187.63 By MS/MS By MS/MS By MS/MS 4 3 4 38951000 20066000 8810100 10075000 3439 142 3656;3657 10732;10733;10734;10735;10736;10737;10738;10739;10740;10741;10742 7482;7483;7484;7485;7486;7487;7488;7489;7490;7491 7486 12 9 VVSVLTVVHQDWLNGK EQFNSTFRVVSVLTVV HQDWLNGKEYKCKVSN R V V G K E 0 0 1 1 0 1 0 1 1 0 2 1 0 0 0 1 1 1 0 5 0 0 16 0 1792.9836 P01859 P01859 181 196 IGHG2 Ig gamma-2 chain C region yes yes 2;3 1.5064E-47 153.32 By MS/MS By MS/MS By MS/MS 2 2 2 8979300 4097200 1912800 2969400 3440 1090 3658 10743;10744;10745;10746;10747;10748 7492;7493;7494;7495;7496 7492 58;130 5 VVTNYNSAHDQNSNLLIEYFR RCLGIPTRVVTNYNSA NLLIEYFRNEFGEIQG R V V F R N 1 1 4 1 0 1 1 0 1 1 2 0 0 1 0 2 1 0 2 2 0 0 21 0 2496.2034 P21980 P21980 297 317 TGM2 Protein-glutamine gamma-glutamyltransferase 2 yes yes 3 0.0061559 43.12 By MS/MS By matching By matching 1 1 1 1466900 755910 358190 352760 3441 1184 3659 10749;10750;10751 7497 7497 1 VVTPLSPPTNLHLEANPDTGVLTVSWER RDAPIVNKVVTPLSPP VLTVSWERSTTPDITG K V V E R S 1 1 2 1 0 0 2 1 1 0 4 0 0 0 4 2 4 1 0 4 0 0 28 0 3041.5822 P02751 P02751 1170 1197 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 3 0.001513 47.806 By MS/MS By MS/MS By matching 1 1 1 24657000 11422000 8175200 5059900 3442 1095 3660 10752;10753;10754 7498;7499 7499 2 VVVSPTKK AAATSAKKVVVSPTKK VVVSPTKKVAVATPAK K V V K K V 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 0 0 8 1 856.5382 P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1 P19338 64 71 NCL Nucleolin yes no 2 0.012869 104.42 By MS/MS By MS/MS By matching 1 1 1 403950000 126180000 133570000 144200000 3443 1175 3661 10755;10756;10757 7500;7501 7500 1526 2 VWDLAQQVVLSSYR GSKDICIKVWDLAQQV QVVLSSYRAHAAQVTC K V W Y R A 1 1 0 1 0 2 0 0 0 0 2 0 0 0 0 2 0 1 1 3 0 0 14 0 1662.873 Q9BQA1;H0Y711 Q9BQA1 151 164 WDR77 Methylosome protein 50 yes no 2 1.0449E-05 89.189 By MS/MS 1 1690800 1690800 0 0 3444 1774 3662 10758 7502 7502 1 VWSPLVTEEGKR TVARSEHKVWSPLVTE LVTEEGKRHPYKMNLA K V W K R H 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 1 1 1 0 2 0 0 12 1 1399.746 O00151 O00151 88 99 PDLIM1 PDZ and LIM domain protein 1 yes yes 2 0.017791 55.899 By MS/MS By matching By matching 1 1 1 5345200 1979200 1902200 1463800 3445 968 3663 10759;10760;10761 7503 7503 1280 1 VYAPASTLVDQPYANEGTVVVTER QSLIVTERVYAPASTL GTVVVTERVIQPHGGG R V Y E R V 3 1 1 1 0 1 2 1 0 0 1 0 0 0 2 1 3 0 2 5 0 0 24 0 2578.2915 Q14126 Q14126 967 990 DSG2 Desmoglein-2 yes yes 3 0.0032527 45.913 By matching By matching By MS/MS 1 1 1 7793100 2044800 3048200 2700100 3446 1402 3664 10762;10763;10764 7504 7504 3837 1 VYDQTNPYTDVR FGGEYRPKVYDQTNPY TNPYTDVRRRYWNAYM K V Y V R R 0 1 1 2 0 1 0 0 0 0 0 0 0 0 1 0 2 0 2 2 0 0 12 0 1469.6787 Q9UPU5 Q9UPU5 2017 2028 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes yes 2 0.00037544 90.05 By matching By MS/MS By matching 1 1 1 3360100 1048700 1317000 994390 3447 1941 3665 10765;10766;10767 7505 7505 3933 1 VYEHTSRFSPK VDSEKSNKVYEHTSRF HTSRFSPKKTSSNCNG K V Y P K K 0 1 0 0 0 0 1 0 1 0 0 1 0 1 1 2 1 0 1 1 0 0 11 1 1349.6728 P46100;A0A096LNW1;A0A096LNL9;A0A096LNN3 P46100 308 318 ATRX Transcriptional regulator ATRX yes no 3 0.0057914 64.534 By matching By MS/MS By MS/MS 1 1 1 7354700 3339800 2360300 1654600 3448 1243 3666 10768;10769;10770 7506;7507 7506 1622;3788 2 VYENVGLMQQQK EMREDSARVYENVGLM VGLMQQQKSFR_____ R V Y Q K S 0 0 1 0 0 3 1 1 0 0 1 1 1 0 0 0 0 0 1 2 0 0 12 0 1435.7129 Q06124 Q06124 583 594 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 2;3 0 238.73 By MS/MS By MS/MS By MS/MS 3 3 3 39685000 13043000 15406000 11235000 3449 1347 3667;3668 10771;10772;10773;10774;10775;10776;10777;10778;10779 7508;7509;7510;7511;7512;7513;7514 7511 134 3826 7 VYESIGQYGGETVK LEPITDERVYESIGQY QYGGETVKIVRIEKAR R V Y V K I 0 0 0 0 0 1 2 3 0 1 0 1 0 0 0 1 1 0 2 2 0 0 14 0 1528.7409 Q8N3R9 Q8N3R9 242 255 MPP5 MAGUK p55 subfamily member 5 yes yes 2 6.506E-08 105.46 By matching By MS/MS By matching 1 1 1 7207600 1849700 2435800 2922000 3450 1629 3669 10780;10781;10782 7515 7515 3874 1 VYSLGEENSTNNSTGQSR AKKVSGFKVYSLGEEN NNSTGQSRAVIAAAAR K V Y S R A 0 1 3 0 0 1 2 2 0 0 1 0 0 0 0 4 2 0 1 1 0 0 18 0 1941.8664 Q9ULK5 Q9ULK5 307 324 VANGL2 Vang-like protein 2 yes yes 2 0.00032697 78.964 By MS/MS By MS/MS By MS/MS 1 1 1 2311300 851200 761280 698820 3451 1927 3670 10783;10784;10785 7516;7517;7518 7518 3932 3 VYTYIQSR SSCYEHQRVYTYIQSR VYTYIQSRFYRAPEVI R V Y S R F 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 1 1 0 2 1 0 0 8 0 1028.5291 Q92630;A0A0A0MTH5;Q9NR20 Q92630 379 386 DYRK2;DYRK4 Dual specificity tyrosine-phosphorylation-regulated kinase 2;Dual specificity tyrosine-phosphorylation-regulated kinase 4 yes no 2 0.012042 69.423 By MS/MS 1 0 0 0 0 3452 1703 3671 10786 7519 7519 3886 1 WCALSHHER TDECKPVKWCALSHHE CALSHHERLKCDEWSV K W C E R L 1 1 0 0 1 0 1 0 2 0 1 0 0 0 0 1 0 1 0 0 0 0 9 0 1194.5353 P02787 P02787 363 371 TF Serotransferrin yes yes 3 0.0060559 61.161 By MS/MS By matching By matching 1 1 1 1444700 825550 323910 295260 3453 1097 3672 10787;10788;10789 7520 7520 1 WDEQTSNTKGDDDEESDEEAVK RLMLHRIKWDEQTSNT ESDEEAVKKTNKCVLV K W D V K K 1 0 1 5 0 1 5 1 0 0 0 2 0 0 0 2 2 1 0 1 0 0 22 1 2526.0154 O43395 O43395 604 625 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 3 0.014646 50.392 By matching By MS/MS By matching 1 1 1 4808000 1831200 1755900 1220900 3454 1008 3673 10790;10791;10792 7521 7521 1341;3242 1 WDGSEEDEDNSK KAQKSNKKWDGSEEDE EEDEDNSKKIKERSRI K W D S K K 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 2 0 1 0 0 0 0 12 0 1409.5219 A0A087WUT6;O60841 A0A087WUT6 161 172 EIF5B Eukaryotic translation initiation factor 5B yes no 2 1.9755E-05 107.65 By MS/MS By MS/MS By MS/MS 2 2 2 9414000 3143900 3321900 2948200 3455 41 3674 10793;10794;10795;10796;10797;10798 7522;7523;7524;7525;7526;7527;7528 7528 49 6 WDQTADQTPGATPK PPSKRKRRWDQTADQT QTPGATPKKLSSWDQA R W D P K K 2 0 0 2 0 2 0 1 0 0 0 1 0 0 2 0 3 1 0 0 0 0 14 0 1514.7001 O75533 O75533 200 213 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0036747 62.799 By MS/MS By MS/MS By MS/MS 1 1 1 2988700 1071600 1120100 796900 3456 1035 3675 10799;10800;10801 7529;7530;7531 7531 3257;3258 1 WDTGENPIYK EKEKMNAKWDTGENPI TGENPIYKSAVTTVVN K W D Y K S 0 0 1 1 0 0 1 1 0 1 0 1 0 0 1 0 1 1 1 0 0 0 10 0 1221.5666 P05556 P05556 775 784 ITGB1 Integrin beta-1 yes yes 2 1.2139E-14 146.23 By MS/MS By MS/MS By MS/MS 1 1 1 38589000 13285000 12789000 12515000 3457 1110 3676 10802;10803;10804 7532;7533;7534 7534 3759 3 WFYIASAFR TLDRITGKWFYIASAF FYIASAFRNEEYNKSV K W F F R N 2 1 0 0 0 0 0 0 0 1 0 0 0 2 0 1 0 1 1 0 0 0 9 0 1159.5815 P19652;P02763 P19652 43 51 ORM2;ORM1 Alpha-1-acid glycoprotein 2;Alpha-1-acid glycoprotein 1 yes no 2 0.0036818 98.523 By MS/MS By matching By matching 1 1 1 7241800 3348600 1964200 1929000 3458 1096 3677 10805;10806;10807 7535 7535 1 WGTDEAQFIYILGNR LYEAGELKWGTDEAQF FIYILGNRSKQHLRLV K W G N R S 1 1 1 1 0 1 1 2 0 2 1 0 0 1 0 0 1 1 1 0 0 0 15 0 1781.8737 P08133 P08133 192 206 ANXA6 Annexin A6 yes yes 2 0.0010659 80.596 By MS/MS By matching 1 1 2809800 0 1249400 1560400 3459 1125 3678 10808;10809 7536 7536 1 WHWSSGSLVSYK HDPKKNRRWHWSSGSL SGSLVSYKSWGIGAPS R W H Y K S 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 4 0 2 1 1 0 0 12 0 1435.6884 P05451;H7BZ24;P48304 P05451 111 122 REG1A;REG1B Lithostathine-1-alpha;Lithostathine-1-beta yes no 3 0.00050197 70.685 By MS/MS By matching By MS/MS 1 1 1 783620 496370 287250 0 3460 1108 3679 10810;10811;10812 7537;7538;7539 7537 3 WLDDLLASPPPSGGGAR PGPESSSRWLDDLLAS PPSGGGARRGAGAELK R W L A R R 2 1 0 2 0 0 0 3 0 0 3 0 0 0 3 2 0 1 0 0 0 0 17 0 1707.858 Q9C0C2 Q9C0C2 684 700 TNKS1BP1 182 kDa tankyrase-1-binding protein yes yes 2 0.0026683 58.658 By matching By matching By MS/MS 1 1 1 4326600 2108900 945970 1271800 3461 1804 3680 10813;10814;10815 7540 7540 2519 1 WLDESDAEMELR FLAPDFDRWLDESDAE SDAEMELRAKEEERLN R W L L R A 1 1 0 2 0 0 3 0 0 0 2 0 1 0 0 1 0 1 0 0 0 0 12 0 1492.6504 H3BPZ1;H3BS72;Q9P035 H3BPZ1 85 96 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 2 1.6273E-07 117.03 By MS/MS By matching By matching 2 2 2 71632000 26653000 20276000 24702000 3462 832 3681;3682 10816;10817;10818;10819;10820;10821 7541;7542 7541 62 1121 2 WLDGASFDNER VLRLRERRWLDGASFD GASFDNERGSTSKEGE R W L E R G 1 1 1 2 0 0 1 1 0 0 1 0 0 1 0 1 0 1 0 0 0 0 11 0 1308.5735 E7EMW7;O95071 E7EMW7 316 326 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 2 0.015068 54.343 By MS/MS By matching By MS/MS 1 1 1 1589100 549880 548490 490770 3463 521 3683 10822;10823;10824 7543;7544 7543 664 2 WLNSGRGDEASEEGQNGSSPK KQQREKTRWLNSGRGD GQNGSSPKSKTKWTKE R W L P K S 1 1 2 1 0 1 3 4 0 0 1 1 0 0 1 4 0 1 0 0 0 0 21 1 2203.973 E7EV99;E7ENY0;P35611;H0Y9H2 E7EV99 447 467 ADD1 Alpha-adducin yes no 3 0.0022622 62.468 By matching By MS/MS By matching 1 1 1 20300000 7850200 6841000 5608300 3464 523 3684 10825;10826;10827 7545 7545 666;667 1 WLPSLSPDCINVVVTGK TWEQAFLRWLPSLSPD INVVVTGKDRLTAGLI R W L G K D 0 0 1 1 1 0 0 1 0 1 2 1 0 0 2 2 1 1 0 3 0 0 17 0 1883.9815 H7C1I3;H7BYI2;Q9NZC9 H7C1I3 58 74 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes no 2 0.0096864 44.765 By matching By matching By MS/MS 1 1 1 1298700 367290 432430 498970 3465 854 3685 10828;10829;10830 7546 7546 1152;1153 1 WLPSSPSGVAK EADHLSSKWLPSSPSG SSPSGVAKAKMFKLDT K W L A K A 1 0 0 0 0 0 0 1 0 0 1 1 0 0 2 3 0 1 0 1 0 0 11 0 1127.5975 H3BP52;H3BTF4;Q8IWI9 H3BP52 445 455 MGA MAX gene-associated protein yes no 2 0.0074404 62.338 By MS/MS By matching By MS/MS 1 1 1 2785400 1322800 190310 1272300 3466 828 3686 10831;10832;10833 7547;7548 7547 1114;1115 2 WRPHSPDGPR GSRRDGERWRPHSPDG PHSPDGPRSAGWREHM R W R P R S 0 2 0 1 0 0 0 1 1 0 0 0 0 0 3 1 0 1 0 0 0 0 10 1 1203.5897 I1E4Y6;Q6Y7W6;C9JH78;C9IYH5 I1E4Y6 254 263 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 2;3 0.0010293 96.059 By MS/MS By MS/MS By MS/MS 2 2 2 35550000 12631000 14911000 8008100 3467 881 3687 10834;10835;10836;10837;10838;10839 7549;7550;7551;7552;7553 7553 1186 5 WSLLLLSLLS RMSLRSLKWSLLLLSL LLLLSLLS________ K W S L S - 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 3 0 1 0 0 0 0 10 0 1143.6903 C9JXR0 C9JXR0 20 29 B3GALNT1 yes yes 2 0.0047375 58.917 By MS/MS 1 0 0 0 0 3468 455 3688 10840 7554 7554 598;599;600 1 WSTGDLVSKQVKTMQQVHAK W S A K 1 0 0 1 0 3 0 1 1 0 1 3 1 0 0 2 2 1 0 3 0 0 20 2 2270.1841 REV__A0A1B0GUS7 yes no 3 0.018849 40.179 By matching By matching By MS/MS 1 1 2 5911400 1306000 1798500 2806900 + 3469 1985 3689 10841;10842;10843;10844 7555 7555 1 WTAWSNGSSATEMRVISLK EISRHRNKWTAWSNGS EMRVISLKASEESSFE K W T L K A 2 1 1 0 0 0 1 1 0 1 1 1 1 0 0 4 2 2 0 1 0 0 19 1 2123.047 Q8IW00 Q8IW00 139 157 VSTM4 V-set and transmembrane domain-containing protein 4;Peptide Lv yes yes 2 0.016764 43.991 By MS/MS 1 0 0 0 0 3470 1610 3690 10845 7556 7556 2203;2204;2205;3450 1 WTKPSSFSDSER GEDMLVWRWTKPSSFS SSFSDSER________ R W T E R - 0 1 0 1 0 0 1 0 0 0 0 1 0 1 1 4 1 1 0 0 0 0 12 1 1425.6525 H0Y9B7;Q8NC56 H0Y9B7 74 85 LEMD2 LEM domain-containing protein 2 yes no 2 3.4284E-38 154.13 By MS/MS By MS/MS By matching 1 1 1 24183000 8209800 9008600 6964300 3471 774 3691 10846;10847;10848 7557;7558 7558 1057 2 WYRAPEIMLNSKGYTK LTEYVATRWYRAPEIM LNSKGYTKSIDIWSVG R W Y T K S 1 1 1 0 0 0 1 1 0 1 1 2 1 0 1 1 1 1 2 0 0 0 16 2 1955.9928 P28482;B3KR49;E9PJF0;E9PQW4;P27361 P28482 192 207 MAPK1;MAPK3 Mitogen-activated protein kinase 1;Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 no no 3 0.015625 42.317 By MS/MS 1 0 0 0 0 3472 1200;337 3692 10849 7559 7559 1 YAALSDQGLDIK KVRPSASRYAALSDQG SDQGLDIKAAFQPEAN R Y A I K A 2 0 0 2 0 1 0 1 0 1 2 1 0 0 0 1 0 0 1 0 0 0 12 0 1292.6612 Q8WX93 Q8WX93 1348 1359 PALLD Palladin yes yes 2 0.0032088 72.643 By MS/MS By MS/MS By MS/MS 1 1 1 1776700 597510 564990 614180 3473 1686 3693 10850;10851;10852 7560;7561;7562 7560 3882 3 YAAVCRPLHYTVLMHPR LVVMSYDRYAAVCRPL YTVLMHPRFCHLLAVA R Y A P R F 2 2 0 0 1 0 0 0 2 0 2 0 1 0 2 0 1 0 2 2 0 0 17 1 2083.0608 A0A140T964;A0A0G2JN32;O76001;Q9GZK6 A0A140T964 126 142 OR2J3;OR2J1 Olfactory receptor 2J3;Olfactory receptor 2J1 yes no 3 0.010686 47.201 By MS/MS By matching 1 1 377180 192980 184200 0 3474 229 3694 10853;10854 7563 7563 2944;3603 0 YADFSISPNAVSAEEDGYTLFVAGFEDGGAGDSLSYHSGQK ENNTAYAKYADFSISP LSYHSGQKFSTFDRDQ K Y A Q K F 5 0 1 4 0 1 3 6 1 1 2 1 0 3 1 6 1 0 3 2 0 0 41 0 4257.8927 K7ES70;P55083 K7ES70 169 209 MFAP4 Microfibril-associated glycoprotein 4 yes no 3 1.9425E-15 59.793 By matching By MS/MS By MS/MS 1 1 1 149800000 72560000 32834000 44410000 3475 955 3695 10855;10856;10857 7564;7565 7565 2 YADLPGIAR ________________ ADLPGIARNEPDVYET K Y A A R N 2 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 9 0 974.51853 F8W0U6;F8VRV7;F8VW18;F8W1I6;Q13561 F8W0U6 6 14 DCTN2 Dynactin subunit 2 yes no 2 0.0025533 104.37 By matching By MS/MS By MS/MS 1 1 1 7901000 2705400 2842300 2353300 3476 668 3696 10858;10859;10860 7566;7567 7566 3690 2 YAKESLKEEDESDDDNM DIREEAEKYAKESLKE DESDDDNM________ K Y A N M - 1 0 1 4 0 0 4 0 0 0 1 2 1 0 0 2 0 0 1 0 0 0 17 2 2016.8106 H0YJ03;G3V4X5;P25788 H0YJ03 67 83 PSMA3 Proteasome subunit alpha type-3 yes no 3 0.0039297 50.088 By MS/MS By matching By matching 1 1 1 2577900 1124600 1138000 315230 3477 723 3697 10861;10862;10863 7568 7568 51 975;976 1 YALYDATYETK MLPDKDCRYALYDATY YDATYETKESKKEDLV R Y A T K E 2 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 2 0 3 0 0 0 11 0 1336.6187 E9PP50;P23528;E9PQB7;G3V1A4;E9PK25;E9PLJ3;Q9Y281 E9PP50 82 92 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2 0.012646 63.184 By MS/MS 1 1864100 0 1864100 0 3478 613 3698 10864 7569 7569 1 YATPQVIQAPGPR QSFASDPKYATPQVIQ VIQAPGPRAGPCILPI K Y A P R A 2 1 0 0 0 2 0 1 0 1 0 0 0 0 3 0 1 0 1 1 0 0 13 0 1396.7463 H0Y5H7;C9J1X3;Q07912 H0Y5H7 394 406 TNK2 Activated CDC42 kinase 1 yes no 2 0.00013296 94.692 By matching By MS/MS By MS/MS 1 1 1 2980000 1113800 1062200 804010 3479 406 3699 10865;10866;10867 7570;7571 7571 3641 2 YDHLDPTEMEKVEK AYRNKDERYDHLDPTE TEMEKVEKCISDAMSW R Y D E K C 0 0 0 2 0 0 3 0 1 0 1 2 1 0 1 0 1 0 1 1 0 0 14 1 1732.7978 E9PDE8;O95757 E9PDE8 700 713 HSPA4L Heat shock 70 kDa protein 4L yes no 3 0.0081486 41.088 By matching By MS/MS By matching 1 1 1 122290000 49000000 39527000 33761000 3480 565 3700 10868;10869;10870 7572 7572 3080;3672 1 YEELQVTAGK AESWYQTKYEELQVTA ELQVTAGKHGDSLRDT K Y E G K H 1 0 0 0 0 1 2 1 0 0 1 1 0 0 0 0 1 0 1 1 0 0 10 0 1136.5714 CON__Q8VED5;CON__Q5XKE5;Q5XKE5 CON__Q8VED5 337 346 KRT79 Keratin, type II cytoskeletal 79 yes no 2 0.00062432 108.74 By MS/MS 1 365180 365180 0 0 + 3481 474 3701 10871 7573 7573 1 YEEMLKTK EAAIAVEKYEEMLKTK YEEMLKTKTLPISKLS K Y E T K T 0 0 0 0 0 0 2 0 0 0 1 2 1 0 0 0 1 0 1 0 0 0 8 1 1040.5212 O15050 O15050 1845 1852 TRANK1 TPR and ankyrin repeat-containing protein 1 yes yes 2 0.016973 50.703 By MS/MS 1 0 0 0 0 3482 988 3702 10872 7574 7574 3235 1 YEGSVRQNSR RPTFLQSKYEGSVRQN GSVRQNSRPGKPFLY_ K Y E S R P 0 2 1 0 0 1 1 1 0 0 0 0 0 0 0 2 0 0 1 1 0 0 10 1 1194.5741 E5RJT3;E7EN24;Q12864 E5RJT3 131 140 CDH17 Cadherin-17 yes no 2 0.01392 45.335 By MS/MS 1 0 0 0 0 3483 515 3703 10873 7575 7575 3663 1 YEHDDIVSTVSVLSSGTQAVSGSK LIVSKFCKYEHDDIVS TQAVSGSKDICIKVWD K Y E S K D 1 0 0 2 0 1 1 2 1 1 1 1 0 0 0 6 2 0 1 4 0 0 24 0 2465.1922 Q9BQA1;H0Y711 Q9BQA1 122 145 WDR77 Methylosome protein 50 yes no 3 0.0031059 45.972 By MS/MS By matching By matching 1 1 1 1923400 1400500 326950 195950 3484 1774 3704 10874;10875;10876 7576 7576 1 YEMYSKNAEKPSR VNNYRSTKYEMYSKNA KNAEKPSRSKRTIKQK K Y E S R S 1 1 1 0 0 0 2 0 0 0 0 2 1 0 1 2 0 0 2 0 0 0 13 2 1601.7508 H0Y8J2;Q03188 H0Y8J2 307 319 CENPC Centromere protein C yes no 3 0.015693 45.077 By MS/MS 1 0 0 0 0 3485 771 3705 10877 7577 7577 1055 1 YEPQSPGYEPR EFESQSPRYEPQSPGY QSPGYEPRSPGYEPRS R Y E P R S 0 1 0 0 0 1 2 1 0 0 0 0 0 0 3 1 0 0 2 0 0 0 11 0 1321.5939 H3BS42;Q9H5H4 H3BS42 90 100 ZNF768 Zinc finger protein 768 yes no 2 0.0022891 81.709 By MS/MS By MS/MS By MS/MS 1 1 1 10615000 2957000 4264400 3393600 3486 843 3706 10878;10879;10880 7578;7579;7580 7578 1134 3 YESLTDPSKLDSGK SDALDKIRYESLTDPS PSKLDSGKELKIDIIP R Y E G K E 0 0 0 2 0 0 1 1 0 0 2 2 0 0 1 3 1 0 1 0 0 0 14 1 1538.7464 P08238;Q58FF8;Q58FF7;P07900;G3V2J8 P08238 56 69 HSP90AB1;HSP90AB2P;HSP90AB3P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha no no 3 0.0090157 63.181 By MS/MS By matching 1 1 1260700 0 1056600 204090 3487 1126;1122 3707 10881;10882 7581 7581 1 YESSSYTDQFSR DLEQPTYRYESSSYTD SYTDQFSRNYEHRLRY R Y E S R N 0 1 0 1 0 1 1 0 0 0 0 0 0 1 0 4 1 0 2 0 0 0 12 0 1468.6107 A0A087X0K9;G5E9E7;G3V1L9;Q07157 A0A087X0K9 969 980 TJP1 Tight junction protein ZO-1 yes no 2 0.00067549 87.298 By MS/MS By MS/MS By MS/MS 1 1 1 2182300 707630 846650 627990 3488 98 3708 10883;10884;10885 7582;7583;7584 7582 122;3584 3 YEYDPDISPPR LSFPKNSKYEYDPDIS DPDISPPRKKQAKSHF K Y E P R K 0 1 0 2 0 0 1 0 0 1 0 0 0 0 3 1 0 0 2 0 0 0 11 0 1350.6092 Q9BRD0;H7C462 Q9BRD0 318 328 BUD13 BUD13 homolog yes no 2 0.0092733 59.185 By matching By MS/MS 1 1 1029200 450260 578980 0 3489 1776 3709 10886;10887 7585 7585 2463 1 YEYGVPLQTSDSFLR LDIPTAAKYEYGVPLQ QTSDSFLRFPSSLTSS K Y E L R F 0 1 0 1 0 1 1 1 0 0 2 0 0 1 1 2 1 0 2 1 0 0 15 0 1773.8574 E9PNE4;A0A0A0MRU7;A0A087X1J4;Q2MV58 E9PNE4 207 221 TCTN1 Tectonic-1 yes no 3 0.01323 40.515 By matching By MS/MS By matching 1 1 1 2450800 743370 1171700 535790 3490 104 3710 10888;10889;10890 7586 7586 133 1 YFAHSILTVSEEEWNTGETYTCVVAHEALPNR PEPQAPGRYFAHSILT AHEALPNRVTERTVDK R Y F N R V 3 1 2 0 1 0 5 1 2 1 2 0 0 1 1 2 4 1 2 3 0 0 32 0 3722.7311 A0A087WYJ9;A0A1B0GUU9;P04220;P01871 A0A087WYJ9 391 422 IGHM Ig mu heavy chain disease protein;Ig mu chain C region yes no 4 5.1106E-79 112.55 By MS/MS By MS/MS By MS/MS 1 1 1 41467000 23839000 8416600 9210700 3491 80 3711 10891;10892;10893 7587;7588;7589;7590 7590 4 YFDSGDYNMAK SAEEQKQKYFDSGDYN SGDYNMAKAKMKNKQL K Y F A K A 1 0 1 2 0 0 0 1 0 0 0 1 1 1 0 1 0 0 2 0 0 0 11 0 1309.5285 H3BQ52;H3BTD3;H3BMD8;A6NMQ3;Q5T5H1;P56211;O43768 H3BQ52 18 28 ARPP19;ENSA cAMP-regulated phosphoprotein 19;Alpha-endosulfine yes no 2 0.0060549 67.456 By MS/MS By matching By MS/MS 1 1 1 11736000 3848500 3218300 4669400 3492 309 3712 10894;10895;10896 7591;7592 7592 411 2 YFQISQDEDESESED DKETYELRYFQISQDE EDESESED________ R Y F E D - 0 0 0 3 0 2 4 0 0 1 0 0 0 1 0 3 0 0 1 0 0 0 15 0 1819.6908 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 107 121 RPL22L1 60S ribosomal protein L22-like 1 yes no 2 0.00032142 82.202 By MS/MS By MS/MS By MS/MS 2 1 1 46275000 12056000 16789000 17430000 3493 458 3713 10897;10898;10899;10900 7593;7594;7595;7596;7597;7598;7599 7597 601;602 7 YFWYHNDTLLDPSLYK TGKPRPDKYFWYHNDT LLDPSLYKHESKLVLR K Y F Y K H 0 0 1 2 0 0 0 0 1 0 3 1 0 1 1 1 1 1 3 0 0 0 16 0 2073.9836 O75339 O75339 341 356 CILP Cartilage intermediate layer protein 1;Cartilage intermediate layer protein 1 C1;Cartilage intermediate layer protein 1 C2 yes yes 3 0.018849 46.41 By MS/MS 1 778270 778270 0 0 3494 1031 3714 10901 7600 7600 3753 0 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR DKAERAKKYGGSVGSQ SQEPPTKREYDQCRIQ K Y G K R E 1 1 0 0 0 2 2 4 0 0 0 1 0 0 10 5 1 0 1 3 0 0 31 1 3082.536 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323 E9PS08 37 67 UBXN1 UBX domain-containing protein 1 yes no 3 0.0022677 46.404 By MS/MS By matching By matching 1 1 1 10726000 4011500 3874100 2840400 3495 31 3715 10902;10903;10904 7601 7601 33;34 1 YGINTTDIFQTVDLWEGK QFLQAAERYGINTTDI TVDLWEGKNMACVQRT R Y G G K N 0 0 1 2 0 1 1 2 0 2 1 1 0 1 0 0 3 1 1 1 0 0 18 0 2099.0211 X6RJP6;P37802 X6RJP6 103 120 TAGLN2 Transgelin-2 yes no 2 0.0012903 103.14 By MS/MS By matching By matching 1 1 1 6661500 3529100 1363200 1769200 3496 1226 3716 10905;10906;10907 7602 7602 1 YGIYAVENEHMNR PGGRGDMKYGIYAVEN VENEHMNRLQSQRAML K Y G N R L 1 1 2 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 2 1 0 0 13 0 1594.7198 H0YJL5;H0YJJ5;Q9UEU0 H0YJL5 29 41 VTI1B Vesicle transport through interaction with t-SNAREs homolog 1B yes no 2 0.0021534 60.064 By MS/MS By MS/MS By matching 2 2 2 3554200 1113900 1270700 1169600 3497 798 3717;3718 10908;10909;10910;10911;10912;10913 7603;7604 7603 59 3712;3713 2 YGKDATNVGDEGGFAPNILENK LKNVIKEKYGKDATNV APNILENKEGLELLKT K Y G N K E 2 0 3 2 0 0 2 4 0 1 1 2 0 1 1 0 1 0 1 1 0 0 22 1 2308.0972 P06733 P06733 200 221 ENO1 Alpha-enolase yes yes 3 0.012345 40.81 By MS/MS By matching 1 1 2108900 1171000 0 937970 3498 1113 3719 10914;10915 7605 7605 1 YGLFKEENPYAR RHDEIRKKYGLFKEEN KEENPYARFENN____ K Y G A R F 1 1 1 0 0 0 2 1 0 0 1 1 0 1 1 0 0 0 2 0 0 0 12 1 1485.7252 A8MXQ1;P53801 A8MXQ1 144 155 PTTG1IP Pituitary tumor-transforming gene 1 protein-interacting protein yes no 2;3 3.6775E-05 105.17 By MS/MS By MS/MS By MS/MS 2 2 2 11653000 4653300 3760800 3238400 3499 321 3720 10916;10917;10918;10919;10920;10921 7606;7607;7608 7606 3623 3 YGLQDSDEEEEEHPSK FKVSHFSKYGLQDSDE EEEEHPSKTSTKKLKT K Y G S K T 0 0 0 2 0 1 5 1 1 0 1 1 0 0 1 2 0 0 1 0 0 0 16 0 1890.7755 P52948 P52948 883 898 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes yes 3 0.00080352 69.081 By MS/MS By MS/MS By MS/MS 1 1 1 10285000 3307700 3826100 3151100 3500 1288 3721 10922;10923;10924 7609;7610;7611 7610 1698 3 YGMGTSVER IFICENNRYGMGTSVE GMGTSVERAAASTDYY R Y G E R A 0 1 0 0 0 0 1 2 0 0 0 0 1 0 0 1 1 0 1 1 0 0 9 0 998.44913 P08559 P08559 227 235 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 2 0.0027458 108.31 By MS/MS By MS/MS By MS/MS 2 2 2 94205000 33061000 33619000 27525000 3501 1127 3722;3723 10925;10926;10927;10928;10929;10930 7612;7613;7614;7615;7616;7617;7618;7619;7620;7621;7622 7619 95 1471;3281 11 YGQFSGLNPGGR PADKNKGKYGQFSGLN SGLNPGGRPITPPRNS K Y G G R P 0 1 1 0 0 1 0 4 0 0 1 0 0 1 1 1 0 0 1 0 0 0 12 0 1251.5996 P62136 P62136 306 317 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 2 0.0028897 74.165 By MS/MS By MS/MS By matching 1 1 1 3039200 948390 1162400 928430 3502 1309 3724 10931;10932;10933 7623;7624 7623 3817 2 YGRAESPDLR SVGKWQDRYGRAESPD RAESPDLRRLPGAIDV R Y G L R R 1 2 0 1 0 0 1 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 10 1 1162.5731 Q6UN15;A0A0B4J203 Q6UN15 299 308 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 no no 2 0.0088785 68.463 By MS/MS By matching By matching 1 1 1 9659900 3852300 3113300 2694300 3503 1558;176 3725 10934;10935;10936 7625 7625 242 1 YHELPTLEER CTEQEMPRYHELPTLE ELPTLEERSGPLHPGA R Y H E R S 0 1 0 0 0 0 3 0 1 0 2 0 0 0 1 0 1 0 1 0 0 0 10 0 1285.6303 Q92692 Q92692 454 463 PVRL2 Nectin-2 yes yes 2 0.0016086 83.948 By matching By MS/MS By MS/MS 1 1 1 4064000 1081700 1576700 1405600 3504 1705 3726 10937;10938;10939 7626;7627 7627 3887 2 YHGHSMSDPGVSYR LMELQTYRYHGHSMSD SDPGVSYRTREEIQEV R Y H Y R T 0 1 0 1 0 0 0 2 2 0 0 0 1 0 1 3 0 0 2 1 0 0 14 0 1591.6838 P08559;Q5JPU3;P29803 P08559 289 302 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 2;3 8.008E-17 133.9 By MS/MS By MS/MS By MS/MS 7 6 7 263080000 143010000 46239000 73831000 3505 1127 3727;3728;3729;3730 10940;10941;10942;10943;10944;10945;10946;10947;10948;10949;10950;10951;10952;10953;10954;10955;10956;10957;10958;10959 7628;7629;7630;7631;7632;7633;7634;7635;7636;7637;7638;7639;7640 7633 96 1472;1473;1474;3762 13 YHIGDEILVSGGIGALVR KELANILKYHIGDEIL GGIGALVRLKSLQGDK K Y H V R L 1 1 0 1 0 0 1 4 1 3 2 0 0 0 0 1 0 0 1 2 0 0 18 0 1868.0156 H0Y8L3;Q15582 H0Y8L3 289 306 TGFBI Transforming growth factor-beta-induced protein ig-h3 yes no 3 0.0007092 63.827 By MS/MS By MS/MS By MS/MS 1 1 1 2754100 1754800 524810 474540 3506 772 3731 10960;10961;10962 7641;7642;7643 7641 3 YIASVQGSTPSPR RSKADVERYIASVQGS QGSTPSPRQKSMKGFY R Y I P R Q 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 3 1 0 1 1 0 0 13 0 1361.6939 P49792;F8WBP7 P49792 11 23 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 2 0.001825 76.868 By MS/MS By matching By MS/MS 1 1 1 2827400 807960 1219200 800270 3507 1261 3732 10963;10964;10965 7644;7645 7645 1668 2 YIDQEELNK KTKKIKEKYIDQEELN IDQEELNKTKPIWTRN K Y I N K T 0 0 1 1 0 1 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 9 0 1150.5506 P08238;Q58FF8;P07900;Q14568 P08238 276 284 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 no no 2 0.0024162 132.76 By MS/MS By MS/MS By MS/MS 1 1 1 8525800 2460900 4824800 1240100 3508 1126;1122 3733 10966;10967;10968 7646;7647;7648 7647 3 YIEIDSDEEPR PGKSQKRKYIEIDSDE IDSDEEPRGELLSLRD K Y I P R G 0 1 0 2 0 0 3 0 0 2 0 0 0 0 1 1 0 0 1 0 0 0 11 0 1364.6096 E7EW05;Q9NVU7 E7EW05 543 553 SDAD1 Protein SDA1 homolog yes no 2 0.0022442 79.82 By MS/MS 1 916670 0 0 916670 3509 554 3734 10969 7649 7649 737 1 YISLIYTNYEAGK GVEDLRCKYISLIYTN YTNYEAGKDDYVKALP K Y I G K D 1 0 1 0 0 0 1 1 0 2 1 1 0 0 0 1 1 0 3 0 0 0 13 0 1533.7715 P09211 P09211 104 116 GSTP1 Glutathione S-transferase P yes yes 2 0.0048407 72.006 By MS/MS By matching By matching 1 1 1 1108500 471850 259100 377580 3510 1130 3735 10970;10971;10972 7650 7650 1 YIVTGENGHR LAFSPDGKYIVTGENG VTGENGHRPAVRIWDV K Y I H R P 0 1 1 0 0 0 1 2 1 1 0 0 0 0 0 0 1 0 1 1 0 0 10 0 1144.5625 H7C3R4;O43379 H7C3R4 147 156 WDR62 WD repeat-containing protein 62 yes no 2 0.0048741 60.59 By MS/MS 1 0 0 0 0 3511 872 3736 10973 7651 7651 46 3722 1 YLAEVACGDDR KMKGDYFRYLAEVACG EVACGDDRKQTIDNSQ R Y L D R K 2 1 0 2 1 0 1 1 0 0 1 0 0 0 0 0 0 0 1 1 0 0 11 0 1267.5503 P27348;E9PG15 P27348 128 138 YWHAQ 14-3-3 protein theta yes no 2 0.0024088 87.149 By MS/MS By MS/MS By MS/MS 1 1 1 3043900 987110 1281900 774910 3512 1197 3737 10974;10975;10976 7652;7653;7654 7653 3 YLCEGTESPYQTGQLHPAIR SRLLDVPRYLCEGTES GQLHPAIRVADLLQHI R Y L I R V 1 1 0 0 1 2 2 2 1 1 2 0 0 0 2 1 2 0 2 0 0 0 20 0 2319.0954 H0Y6V4;A0A0G2JQF6;H0Y6P5;Q5TG12;E9PGC5;Q15262 H0Y6V4 109 128 PTPRK Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase kappa yes no 3 0.0017478 58.688 By MS/MS By matching By matching 1 1 1 4437300 1996600 1506300 934390 3513 231 3738 10977;10978;10979 7655 7655 315 1 YLEESDEDDLF VRAKKPIKYLEESDED ESDEDDLF________ K Y L L F - 0 0 0 3 0 0 3 0 0 0 2 0 0 1 0 1 0 0 1 0 0 0 11 0 1373.5511 P11388;J3QR57 P11388 1521 1531 TOP2A DNA topoisomerase 2-alpha yes no 1;2 1.1817E-15 146.11 By MS/MS By MS/MS By MS/MS 1 2 2 47154000 6680800 19508000 20965000 3514 1145 3739 10980;10981;10982;10983;10984 7656;7657;7658;7659 7656 1493 4 YLEPRCPRMVLSLK KAWDDLKKYLEPRCPR PRMVLSLKGVGIKMML K Y L L K G 0 2 0 0 1 0 1 0 0 0 3 1 1 0 2 1 0 0 1 1 0 0 14 2 1760.943 E9PL46;B4E3U2;E9PJM3;Q9UK99 E9PL46 106 119 FBXO3 F-box only protein 3 yes no 2 0.012639 41.283 By matching By MS/MS By matching 1 1 1 1573400 503520 598900 470980 3515 358 3740 10985;10986;10987 7660 7660 488 1 YLGNATAIFFLPDEGK SSWVLLMKYLGNATAI FFLPDEGKLQHLENEL K Y L G K L 2 0 1 1 0 0 1 2 0 1 2 1 0 2 1 0 1 0 1 0 0 0 16 0 1754.8879 P01009;A0A0G2JRN3;A0A024R6I7 P01009 268 283 SERPINA1 Alpha-1-antitrypsin;Short peptide from AAT yes no 2 3.9354E-29 139.74 By MS/MS By MS/MS By MS/MS 1 1 1 26892000 10239000 7519100 9133700 3516 1085 3741 10988;10989;10990 7661;7662;7663;7664 7662 57 4 YLGNGQGQANK Y L N K 1 0 2 0 0 2 0 3 0 0 1 1 0 0 0 0 0 0 1 0 0 0 11 0 1148.5574 REV__E9PL75 yes no 2 0.0088419 59.245 By MS/MS By matching 1 1 4311000 0 2440600 1870500 + 3517 1992 3742 10991;10992 7665 7665 1 YLGSPITTVPK NLVDSEMKYLGSPITT SPITTVPKLDKNPNLG K Y L P K L 0 0 0 0 0 0 0 1 0 1 1 1 0 0 2 1 2 0 1 1 0 0 11 0 1174.6598 D6RJC2;P30307 D6RJC2 165 175 CDC25C M-phase inducer phosphatase 3 yes no 2 0.0038512 71.085 By MS/MS By matching By MS/MS 1 1 1 2417600 768300 877310 771980 3518 500 3743 10993;10994;10995 7666;7667 7666 640 2 YLHPEGLPSDYTISFLFR ALVSQPTRYLHPEGLP YTISFLFRILPDTPQE R Y L F R I 0 1 0 1 0 0 1 1 1 1 3 0 0 2 2 2 1 0 2 0 0 0 18 0 2154.0786 Q05707;A0A0A0MQT7 Q05707 1276 1293 COL14A1 Collagen alpha-1(XIV) chain yes no 3 3.6109E-05 77.221 By MS/MS By MS/MS 1 1 4129400 0 0 4129400 3519 1346 3744 10996;10997 7668;7669 7668 2 YLIVVTDGHPLEGYKEPCGGLEDAVNEAK GSHLKENKYLIVVTDG EDAVNEAKHLGVKVFS K Y L A K H 2 0 1 2 1 0 4 4 1 1 3 2 0 0 2 0 1 0 2 3 0 0 29 1 3172.5387 A0A087X0S5;P12109 A0A087X0S5 152 180 COL6A1 Collagen alpha-1(VI) chain yes no 4 0.010092 34.125 By matching By MS/MS By MS/MS 1 1 1 2891600 1474000 573630 843910 3520 101 3745 10998;10999;11000 7670;7671 7671 2 YLLGDAPVSPSSQK HLRGQEHKYLLGDAPV PVSPSSQKLKRKAEED K Y L Q K L 1 0 0 1 0 1 0 1 0 0 2 1 0 0 2 3 0 0 1 1 0 0 14 0 1460.7511 Q9NYB0;H3BMI8 Q9NYB0 195 208 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes no 2 0.0012859 73.296 By MS/MS By MS/MS By matching 1 1 1 52717000 17336000 16333000 19049000 3521 1877 3746 11001;11002;11003 7672;7673 7672 2646;2647 2 YLQAVVSSMPR SSSLEQEKYLQAVVSS AVVSSMPRYADASGRN K Y L P R Y 1 1 0 0 0 1 0 0 0 0 1 0 1 0 1 2 0 0 1 2 0 0 11 0 1249.6489 G5E933;O95248 G5E933 1245 1255 SBF1 Myotubularin-related protein 5 yes no 2 0.01354 46.462 By MS/MS 1 0 0 0 0 3522 733 3747 11004 7674 7674 992;993;3702 1 YLQIIFLHSNSIAR PSGLPELKYLQIIFLH LHSNSIARVGVNDFCP K Y L A R V 1 1 1 0 0 1 0 0 1 3 2 0 0 1 0 2 0 0 1 0 0 0 14 0 1673.9253 Q9BXN1 Q9BXN1 313 326 ASPN Asporin yes yes 3 0.0018097 60.157 By MS/MS By matching By MS/MS 1 1 1 828120 370580 221750 235790 3523 1794 3748 11005;11006;11007 7675;7676 7675 2 YMEDSTYYK LGDFGLSRYMEDSTYY MEDSTYYKASKGKLPI R Y M Y K A 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 1 1 0 3 0 0 0 9 0 1198.4852 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397 E9PEI4 198 206 PTK2 Focal adhesion kinase 1 yes no 2 0.0015957 86.794 By MS/MS By MS/MS By matching 2 1 1 1795400 916560 521360 357470 3524 534 3749;3750 11008;11009;11010;11011 7677;7678 7677 38 3061;3665 2 YMLTHQELASDGEIETK KALAKCEKYMLTHQEL SDGEIETKLIKGDIYK K Y M T K L 1 0 0 1 0 1 3 1 1 1 2 1 1 0 0 1 2 0 1 0 0 0 17 0 1963.9197 H7BYN4;Q02241 H7BYN4 851 867 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 3 0.0065123 53.779 By MS/MS By matching By matching 1 1 1 3944600 1423900 1452400 1068300 3525 856 3751 11012;11013;11014 7679 7679 63 1156 1 YMNSDTTSPELR RWSDYVERYMNSDTTS DTTSPELREHLAQKPV R Y M L R E 0 1 1 1 0 0 1 0 0 0 1 0 1 0 1 2 2 0 1 0 0 0 12 0 1412.6242 Q96ST3 Q96ST3 1105 1116 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.0020109 95.273 By MS/MS By MS/MS By MS/MS 2 2 1 7249900 3381500 2009600 1858800 3526 1760 3752;3753 11015;11016;11017;11018;11019 7680;7681;7682 7682 2438;2439;3484 2 YMSFTDK KKTSNSQKYMSFTDKS KYMSFTDKSAEDYNSS K Y M D K S 0 0 0 1 0 0 0 0 0 0 0 1 1 1 0 1 1 0 1 0 0 0 7 0 890.3844 H0YCM0;E9PM17;B3KNX7;Q13153 H0YCM0 33 39 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 2 0.0069122 73.975 By matching By MS/MS 1 1 778940 415650 363280 0 3527 336 3754 11020;11021 7683 7683 25 3625 1 YNFHFKEELELVQR Y N Q R 0 1 1 0 0 1 3 0 1 0 2 1 0 2 0 0 0 0 1 1 0 0 14 1 1850.9315 REV__H0YHX3 yes no 3 0.018849 45.28 By MS/MS By matching By matching 1 1 1 1049100 321110 329880 398160 + 3528 1995 3755 11022;11023;11024 7684 7684 3945 0 YNLDASEEEDSNK EDDADLSKYNLDASEE SEEEDSNKKKSNRRSR K Y N N K K 1 0 2 2 0 0 3 0 0 0 1 1 0 0 0 2 0 0 1 0 0 0 13 0 1512.6216 O95218 O95218 183 195 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes yes 2 0.00030329 83.869 By MS/MS By matching By matching 1 1 1 12783000 3003200 6331600 3448200 3529 1060 3756 11025;11026;11027 7685 7685 1423 1 YNTEGRVSPSPSQESLSSSK YFNNMRMKYNTEGRVS QESLSSSKSDTDTGVC K Y N S K S 0 1 1 0 0 1 2 1 0 0 1 1 0 0 2 7 1 0 1 1 0 0 20 1 2139.008 Q5JSH3;H7BY83 Q5JSH3 554 573 WDR44 WD repeat-containing protein 44 yes no 3 0.016615 42.716 By matching By MS/MS By matching 1 1 1 2399100 1052300 711600 635250 3530 1486 3757 11028;11029;11030 7686 7686 1998 1 YPFEELSQGQQLCKECR ACTKCTQRYPFEELSQ QQLCKECRIAHPIVKC R Y P C R I 0 1 0 0 2 3 3 1 0 0 2 1 0 1 1 1 0 0 1 0 0 0 17 1 2170.9776 F5GX09;Q5HYJ3 F5GX09 16 32 FAM76B Protein FAM76B yes no 3 0.016833 43.408 By MS/MS 1 0 0 0 0 3531 634 3758 11031 7687 7687 3685 1 YPPPAVESDAADIVFLIDSSEGVRPDGFAHIR QKLLASTRYPPPAVES PDGFAHIRDFVSRIVR R Y P I R D 4 2 0 4 0 0 2 2 1 3 1 0 0 2 4 3 0 0 1 3 0 0 32 1 3439.7048 E7ENL6;P12111 E7ENL6 818 849 COL6A3 Collagen alpha-3(VI) chain yes no 4 3.3016E-21 68.361 By matching By MS/MS 1 1 8914200 5811900 3102300 0 3532 522 3759 11032;11033 7688 7688 0 YQEDTCYGDAGSAFAVHDLEEDTWYATGILSFDK TFCAGMSKYQEDTCYG TGILSFDKSCAVAEYG K Y Q D K S 4 0 0 5 1 1 3 3 1 1 2 1 0 2 0 2 3 1 3 1 0 0 34 0 3873.6628 A0A087WU08;A0A0C4DGL8;J3QLC9;J3QR68;H0Y300;P00738 A0A087WU08 221 254 HP Haptoglobin;Haptoglobin alpha chain;Haptoglobin beta chain yes no 3 5.8746E-07 55.043 By matching By MS/MS By MS/MS 1 1 1 77410000 33320000 16422000 27669000 3533 32 3760 11034;11035;11036 7689;7690 7690 2 YQESPGIQMK SDTPNPEKYQESPGIQ ESPGIQMKTRLKEGAS K Y Q M K T 0 0 0 0 0 2 1 1 0 1 0 1 1 0 1 1 0 0 1 0 0 0 10 0 1179.5594 E9PJ60;Q9UHI6 E9PJ60 319 328 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 2 0.0014096 91.701 By MS/MS By matching By matching 1 1 1 3180900 1113500 1134700 932760 3534 591 3761 11037;11038;11039 7691 7691 785 1 YQEVWTSSTSPR FQKSSAIRYQEVWTSS WTSSTSPRQKIPKVEL R Y Q P R Q 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 3 2 1 1 1 0 0 12 0 1439.6681 H3BUZ5;H0YN99;Q9H792 H3BUZ5 531 542 PEAK1 Pseudopodium-enriched atypical kinase 1 yes no 2 0.013767 56.404 By MS/MS 1 0 0 0 0 3535 808 3762 11040 7692 7692 3714 1 YQPLASTASDNDFVTPEPR KKPSTGSRYQPLASTA DFVTPEPRRTTRRHPN R Y Q P R R 2 1 1 2 0 1 1 0 0 0 1 0 0 1 3 2 2 0 1 1 0 0 19 0 2106.9858 Q15021 Q15021 1325 1343 NCAPD2 Condensin complex subunit 1 yes yes 2 0.016588 44.577 By MS/MS By matching By matching 1 1 1 21021000 7382400 7138000 6500800 3536 1428 3763 11041;11042;11043 7693 7693 1912 1 YQQPFEDFR REGSFESRYQQPFEDF QQPFEDFRISQEHLAD R Y Q F R I 0 1 0 1 0 2 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 9 0 1228.5513 P19174;V9GY71;V9GYH5 P19174 1253 1261 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 2 0.0012083 133.86 By MS/MS By MS/MS By MS/MS 1 1 1 11340000 3572700 3736500 4030400 3537 1174 3764 11044;11045;11046 7694;7695;7696 7695 3772 3 YRPYDGAASAYAQNYR VYSLYEPRYRPYDGAA SAYAQNYRYPEPERPS R Y R Y R Y 4 2 1 1 0 1 0 1 0 0 0 0 0 0 1 1 0 0 4 0 0 0 16 1 1864.8493 F1T0I1;J3KNL6;O15027 F1T0I1 1199 1214 SEC16A Protein transport protein Sec16A yes no 2 0.015884 42.556 By MS/MS 1 0 0 0 0 3538 621 3765 11047 7697 7697 3681 1 YRSDIHTEAVQAALAK SGGARDERYRSDIHTE AVQAALAKHKEQKMAL R Y R A K H 4 1 0 1 0 1 1 0 1 1 1 1 0 0 0 1 1 0 1 1 0 0 16 1 1771.9217 Q9P265 Q9P265 98 113 DIP2B Disco-interacting protein 2 homolog B yes yes 3 0.0015653 62.68 By MS/MS By MS/MS By matching 1 1 1 4330300 1391000 1528300 1411000 3539 1890 3766 11048;11049;11050 7698;7699 7699 2666;3925 2 YRSPEPDPYLSYR ________________ PDPYLSYRWKRRRSYS R Y R Y R W 0 2 0 1 0 0 1 0 0 0 1 0 0 0 3 2 0 0 3 0 0 0 13 1 1641.7787 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761 H3BRT8 7 19 CLK3 Dual specificity protein kinase CLK3 yes no 3 0.0038282 68.329 By matching By MS/MS By MS/MS 1 1 1 3457700 1726000 770790 960880 3540 835 3767 11051;11052;11053 7700;7701 7701 1125 2 YRSPYSGPK RDRRFRGRYRSPYSGP RSPYSGPKFNSAIRGK R Y R P K F 0 1 0 0 0 0 0 1 0 0 0 1 0 0 2 2 0 0 2 0 0 0 9 1 1053.5243 Q5QP22;Q5QP23;G3XAC6;Q14498 Q5QP22 95 103 RBM39 RNA-binding protein 39 yes no 2;3 7.9598E-06 138.2 By MS/MS By MS/MS By MS/MS 2 2 2 67135000 19822000 27971000 19341000 3541 729 3768 11054;11055;11056;11057;11058;11059 7702;7703;7704;7705;7706;7707;7708;7709 7703 984 8 YSDEQLNSGRQSPSQNER TPINYSLKYSDEQLNS QSPSQNERWARPKHII K Y S E R W 0 2 2 1 0 3 2 1 0 0 1 0 0 0 1 4 0 0 1 0 0 0 18 1 2093.9362 P25054;B7Z2B6;E9PFT7 P25054 1031 1048 APC Adenomatous polyposis coli protein yes no 3 0.0079635 49.223 By MS/MS By matching By matching 1 1 1 5264400 2343700 1547900 1372800 3542 1193 3769 11060;11061;11062 7710 7710 1543;1544 1 YSEEGLSPSKR ESPAAGPRYSEEGLSP EGLSPSKRRRLSMRNH R Y S K R R 0 1 0 0 0 0 2 1 0 0 1 1 0 0 1 3 0 0 1 0 0 0 11 1 1251.6095 A0A0C4DGI9;J3KPG5;F8VU39;Q9UIF9 A0A0C4DGI9 709 719 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 2 0.0036012 78.287 By MS/MS By matching By MS/MS 1 1 1 7048000 2850200 2695500 1502300 3543 201 3770 11063;11064;11065 7711;7712 7712 281 2 YSFCTDHTVLVQTR SNYEQDQKYSFCTDHT HTVLVQTRGGNSNGAL K Y S T R G 0 1 0 1 1 1 0 0 1 0 1 0 0 1 0 1 3 0 1 2 0 0 14 0 1725.8145 P02751 P02751 398 411 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes yes 3 0.0035173 51.939 By MS/MS By matching By matching 1 1 1 1403300 831170 236160 335930 3544 1095 3771 11066;11067;11068 7713 7713 1 YSHDFNFHINYGDLGFLGPEDLR RKVITFNRYSHDFNFH FLGPEDLRVFGSQNLT R Y S L R V 0 1 2 3 0 0 1 3 2 1 3 0 0 3 1 1 0 0 2 0 0 0 23 0 2725.2561 E9PJ21;A0A087WWI4;K7EQK2;A0A087X054;Q9Y4L1 E9PJ21 487 509 HYOU1 Hypoxia up-regulated protein 1 yes no 4 0.0029378 74.698 By MS/MS 1 1469600 0 1469600 0 3545 62 3772 11069 7714 7714 1 YSHVSQHSPSKK PSVVGLARYSHVSQHS SQHSPSKKALYNKHLP R Y S K K A 0 0 0 0 0 1 0 0 2 0 0 2 0 0 1 4 0 0 1 1 0 0 12 1 1383.6895 Q14690 Q14690 1353 1364 PDCD11 Protein RRP5 homolog yes yes 3 0.011046 61.213 By matching By matching By MS/MS 1 1 1 3712500 1653000 857280 1202300 3546 1419 3773 11070;11071;11072 7715 7715 1896 1 YSPSQNSPIHHIPSR SVGNGSSRYSPSQNSP PIHHIPSRRSPAKTIA R Y S S R R 0 1 1 0 0 1 0 0 2 2 0 0 0 0 3 4 0 0 1 0 0 0 15 0 1718.8489 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00 E9PK91 284 298 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.00051918 77.08 By MS/MS By MS/MS By MS/MS 2 2 2 16457000 4901900 6296700 5258200 3547 596 3774 11073;11074;11075;11076;11077;11078 7716;7717;7718;7719 7716 804;805;806 4 YSPSQNSPIHHIPSRR SVGNGSSRYSPSQNSP IHHIPSRRSPAKTIAP R Y S R R S 0 2 1 0 0 1 0 0 2 2 0 0 0 0 3 4 0 0 1 0 0 0 16 1 1874.95 E9PK91;Q9NYF8;E9PQN2;E9PKI6;E9PK09;E9PJA7;H0YF00 E9PK91 284 299 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0058759 47.729 By matching By MS/MS By matching 1 1 1 18262000 4757700 7475300 6029500 3548 596 3775 11079;11080;11081 7720 7720 804;805;806 1 YSPTSPTYSPTSPK VYTPTSPKYSPTSPTY TYSPTSPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 4 3 0 2 0 0 0 14 0 1511.7144 P24928 P24928 1909 1922 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 2 3.1819E-05 102.53 By MS/MS By MS/MS By MS/MS 2 2 2 17008000 5722500 6416800 4868800 3549 1192 3776;3777 11082;11083;11084;11085;11086;11087 7721;7722;7723;7724 7724 1539;1540;3302;3303;3304 4 YSPTSPTYSPTTPK KYSPTSPKYSPTSPTY TYSPTTPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 3 4 0 2 0 0 0 14 0 1525.73 P24928 P24928 1874 1887 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes yes 2 0.0057841 77.744 By matching By matching By MS/MS 1 1 1 10989000 3719400 3587400 3682000 3550 1192 3778 11088;11089;11090 7725 7725 3305 1 YSQILSHFEK CGEEAMKKYSQILSHF QILSHFEKLEPQAAVV K Y S E K L 0 0 0 0 0 1 1 0 1 1 1 1 0 1 0 2 0 0 1 0 0 0 10 0 1250.6295 Q9NYY1 Q9NYY1 142 151 IL20 Interleukin-20 yes yes 2 0.0073055 72.289 By MS/MS 1 1502300 0 0 1502300 3551 1880 3779 11091 7726 7726 2653 1 YSQNIYIQNR LEAELPEKYSQNIYIQ QNIYIQNRNIQTDNNK K Y S N R N 0 1 2 0 0 2 0 0 0 2 0 0 0 0 0 1 0 0 2 0 0 0 10 0 1297.6415 Q99959 Q99959 626 635 PKP2 Plakophilin-2 yes yes 2 0.0053382 69.598 By MS/MS By matching 1 1 1267500 0 682310 585150 3552 1770 3780 11092;11093 7727 7727 3903 1 YSQYQQAIYK VFEKDPIKYSQYQQAI QYQQAIYKCLLDRVPE K Y S Y K C 1 0 0 0 0 3 0 0 0 1 0 1 0 0 0 1 0 0 3 0 0 0 10 0 1290.6245 G3V5T6;H0YJ77;H0YJX6;O14744 G3V5T6 86 95 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes no 2 0.0064193 77.282 By MS/MS 1 452570 452570 0 0 3553 727 3781 11094 7728 7728 1 YSTLHTQSAEPPPPPEPAR VCEEPQVKYSTLHTQS PPPPEPARI_______ K Y S A R I 2 1 0 0 0 1 2 0 1 0 1 0 0 0 6 2 2 0 1 0 0 0 19 0 2074.012 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 176 CD99L2 CD99 antigen-like protein 2 yes no 3 0.00091854 65.231 By MS/MS By MS/MS By MS/MS 1 1 1 5444400 1526900 2175800 1741700 3554 252 3782 11095;11096;11097 7729;7730;7731 7730 335;2953;3607 3 YSTLHTQSAEPPPPPEPARI VCEEPQVKYSTLHTQS PPPEPARI________ K Y S R I - 2 1 0 0 0 1 2 0 1 1 1 0 0 0 6 2 2 0 1 0 0 0 20 1 2187.096 A0A0U1RQT8;Q8TCZ2 A0A0U1RQT8 158 177 CD99L2 CD99 antigen-like protein 2 yes no 3 7.452E-17 95.094 By MS/MS By MS/MS By MS/MS 1 1 1 11588000 4005000 3946800 3636100 3555 252 3783 11098;11099;11100 7732;7733;7734;7735;7736 7733 335;2953;3607 5 YSVGSLSPVSASVLK TPKKKRIKYSVGSLSP PVSASVLKKTEQKEKV K Y S L K K 1 0 0 0 0 0 0 1 0 0 2 1 0 0 1 5 0 0 1 3 0 0 15 0 1492.8137 Q9UBU7 Q9UBU7 353 367 DBF4 Protein DBF4 homolog A yes yes 2 0.016875 45.863 By MS/MS By matching By matching 1 1 1 1698300 631270 691300 375760 3556 1898 3784 11101;11102;11103 7737 7737 2674 1 YSVQLLTPANLLAK IGTKTTLRYSVQLLTP TPANLLAKINGKDSIE R Y S A K I 2 0 1 0 0 1 0 0 0 0 4 1 0 0 1 1 1 0 1 1 0 0 14 0 1529.8817 Q9Y265;H7C4G5 Q9Y265 405 418 RUVBL1 RuvB-like 1 yes no 2 0.0045911 74.649 By matching By MS/MS By matching 1 1 1 17751000 6599400 5822800 5328500 3557 1951 3785 11104;11105;11106 7738 7738 112 2783;3935 1 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR IIAPPERKYSVWIGGS SGPSIVHRKCF_____ K Y S H R K 1 1 0 1 0 3 2 3 1 4 2 1 1 1 1 7 1 2 2 2 0 0 36 1 4099.015 P63261;P60709 P63261 337 372 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 4 4.1718E-12 63.111 By MS/MS By matching 1 1 48638000 0 25680000 22958000 3558 1305 3786 11107;11108 7739 7739 131 1 YTEFYHVPTHSDASK PRKHIVERYTEFYHVP PTHSDASKKRLIEDTE R Y T S K K 1 0 0 1 0 0 1 0 2 0 0 1 0 1 1 2 2 0 2 1 0 0 15 0 1780.8057 Q96HC4;H0YBI4 Q96HC4 247 261 PDLIM5 PDZ and LIM domain protein 5 yes no 3 0.0017332 69.456 By MS/MS By MS/MS By MS/MS 2 2 2 12972000 4566200 4387600 4018000 3559 1740 3787 11109;11110;11111;11112;11113;11114 7740;7741;7742;7743;7744 7743 3479;3893;3894 5 YVDEENSDGETSNHR VILEKAGKYVDEENSD DGETSNHRLQETSSQS K Y V H R L 0 1 2 2 0 0 3 1 1 0 0 0 0 0 0 2 1 0 1 1 0 0 15 0 1750.703 H0YFD2;F8WFC1;Q8N9T8;H0YH26 H0YFD2 74 88 KRI1 Protein KRI1 homolog yes no 2 2.7303E-18 116.58 By MS/MS By MS/MS By MS/MS 1 2 1 6620400 825720 4508600 1286100 3560 704 3788 11115;11116;11117;11118 7745;7746;7747;7748 7747 947 4 YVDSEGHLYTVPIR ________________ HLYTVPIREQGNIYKP K Y V I R E 0 1 0 1 0 0 1 1 1 1 1 0 0 0 1 1 1 0 2 2 0 0 14 0 1647.8257 Q03135 Q03135 6 19 CAV1 Caveolin-1 yes yes 3 0.0042379 75.088 By MS/MS By matching By matching 1 1 1 2551700 1019300 812750 719640 3561 1338 3789 11119;11120;11121 7749 7749 3347 1 YVELFLNSTAGASGGAYEHR DKANMQHRYVELFLNS SGGAYEHRYVELFLNS R Y V H R Y 3 1 1 0 0 0 2 3 1 0 2 0 0 1 0 2 1 0 2 1 0 0 20 0 2141.0178 G8JLB6;P31943;H0YB39 G8JLB6 356 375 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 3 0.016566 36.127 By MS/MS 1 961690 961690 0 0 3562 741 3790 11122 7750 7750 1 YVGVSSDSVGGFR KAKKNKDKYVGVSSDS SDSVGGFRYSERYDPE K Y V F R Y 0 1 0 1 0 0 0 3 0 0 0 0 0 1 0 3 0 0 1 3 0 0 13 0 1328.6361 Q14677 Q14677 159 171 CLINT1 Clathrin interactor 1 yes yes 2 0.0041902 70.028 By matching By MS/MS By matching 1 1 1 1226400 435200 376270 414890 3563 1415 3791 11123;11124;11125 7751 7751 3844 1 YVLGFVASPK PGPKMIRRYVLGFVAS LGFVASPK________ R Y V P K - 1 0 0 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 1 2 0 0 10 0 1079.6015 H0Y9H0 H0Y9H0 165 174 COL4A5 yes yes 2 0.017671 60.478 By MS/MS 1 0 0 0 0 3564 775 3792 11126 7752 7752 1058 1 YVLINWVGEDVPDAR DSQAALPKYVLINWVG GEDVPDARKCACASHV K Y V A R K 1 1 1 2 0 0 1 1 0 1 1 0 0 0 1 0 0 1 1 3 0 0 15 0 1744.8784 Q16643;D6RCR4;D6R9W4;D6RFI1 Q16643 80 94 DBN1 Drebrin yes no 2 0.016236 50.484 By MS/MS By matching 1 1 1460000 0 674740 785220 3565 1457 3793 11127;11128 7753 7753 1 YVSGSSPDLVTR DLASHRHKYVSGSSPD SSPDLVTRKVQLSVKT K Y V T R K 0 1 0 1 0 0 0 1 0 0 1 0 0 0 1 3 1 0 1 2 0 0 12 0 1279.6408 Q15678 Q15678 589 600 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 yes yes 2 0.00047366 88.021 By MS/MS By MS/MS By MS/MS 1 1 1 4602700 1684200 1547000 1371600 3566 1448 3794 11129;11130;11131 7754;7755;7756 7756 1941;1942 3 YWCLWEGAQNGR RKESKSIKYWCLWEGA WEGAQNGRCPLLVDSE K Y W G R C 1 1 1 0 1 1 1 2 0 0 1 0 0 0 0 0 0 2 1 0 0 0 12 0 1538.6725 P01833 P01833 383 394 PIGR Polymeric immunoglobulin receptor;Secretory component yes yes 2 0.016197 62.823 By MS/MS By matching By matching 1 1 1 829960 447460 193070 189430 3567 1089 3795 11132;11133;11134 7757 7757 1 YYCFQGNQFLR SALRWLGRYYCFQGNQ FQGNQFLRFDPVRGEV R Y Y L R F 0 1 1 0 1 2 0 1 0 0 1 0 0 2 0 0 0 0 2 0 0 0 11 0 1494.6714 P02790;Q9BS19 P02790 198 208 HPX Hemopexin yes no 2 0.0052478 72.485 By MS/MS By matching 1 1 1256100 1002700 0 253370 3568 1098 3796 11135;11136 7758 7758 1 YYEGYYAAGPGYGGR GYAPNQGRYYEGYYAA AGPGYGGRNDSDPTYG R Y Y G R N 2 1 0 0 0 0 1 5 0 0 0 0 0 0 1 0 0 0 5 0 0 0 15 0 1642.7052 A0A087WZF1;Q93052;C9JXK9;C9JUT4 A0A087WZF1 274 288 LPP Lipoma-preferred partner yes no 2 0.014484 48.284 By MS/MS By matching By matching 1 1 1 1007200 456540 256390 294270 3569 84 3797 11137;11138;11139 7759 7759 3583 1 YYSDSDDELTVEQR HKPYLYSKYYSDSDDE DELTVEQRRQSIAKEK K Y Y Q R R 0 1 0 3 0 1 2 0 0 0 1 0 0 0 0 2 1 0 2 1 0 0 14 0 1718.7271 Q8NFC6 Q8NFC6 480 493 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.0037151 65.043 By MS/MS By matching By MS/MS 2 2 2 3946500 1132400 1617300 1196800 3570 1660 3798 11140;11141;11142;11143;11144;11145 7760;7761 7761 2278;2279 2 YYSIDDNQNK IRRTELKRYYSIDDNQ SIDDNQNKTHDKKEKK R Y Y N K T 0 0 2 2 0 1 0 0 0 1 0 1 0 0 0 1 0 0 2 0 0 0 10 0 1258.5466 Q8NI08;Q5TF97;Q5TF96 Q8NI08 87 96 NCOA7 Nuclear receptor coactivator 7 yes no 2 0.017297 55.353 By matching By matching By MS/MS 1 1 1 1583000 372650 708630 501690 3571 1664 3799 11146;11147;11148 7762 7762 2283 1 YYVTIIDAPGHR LWKFETSKYYVTIIDA IIDAPGHRDFIKNMIT K Y Y H R D 1 1 0 1 0 0 0 1 1 2 0 0 0 0 1 0 1 0 2 1 0 0 12 0 1403.7197 Q5VTE0;P68104;A0A087WV01;A0A087WVQ9;A6PW80;Q5JR01 Q5VTE0 85 96 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha yes no 2;3 1.4604E-11 136.5 By MS/MS By MS/MS 2 1 4026600 2345900 1680700 0 3572 1317 3800 11149;11150;11151 7763;7764;7765 7765 3