Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_ANGIOGENESIS
Enrichment Score (ES)-0.5335993
Normalized Enrichment Score (NES)-1.6978166
Nominal p-value0.015801355
FDR q-value0.004756662
FWER p-Value0.045
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_ANGIOGENESIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1COL5A2na2731.9940.0678No
2FSTL1na10111.5110.0914No
3PDGFAna29781.0300.0312No
4PTK2na46360.758-0.0240No
5PGLYRP1na55320.634-0.0446No
6VAV2na75800.375-0.1359No
7VCANna85740.265-0.1768No
8FGFR1na88930.225-0.1841No
9LPLna90880.203-0.1859No
10LRPAP1na11161-0.022-0.2931No
11JAG2na15291-0.563-0.4853No
12JAG1na15596-0.604-0.4763No
13THBDna16696-0.856-0.4984Yes
14TNFRSF21na17238-1.017-0.4848Yes
15CCND2na17385-1.070-0.4485Yes
16VTNna17582-1.142-0.4117Yes
17TIMP1na17600-1.148-0.3654Yes
18ITGAVna17601-1.149-0.3182Yes
19SERPINA5na17678-1.177-0.2738Yes
20NRP1na18351-1.527-0.2460Yes
21APPna18352-1.528-0.1832Yes
22STC1na18997-2.647-0.1080Yes
23S100A4na19044-2.8810.0080Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_ANGIOGENESIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_ANGIOGENESIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_ANGIOGENESIS