Datasetexpr.class.cls#HYD_versus_CONTROL.class.cls#HYD_versus_CONTROL_repos
Phenotypeclass.cls#HYD_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_HYPOXIA
Enrichment Score (ES)-0.32462752
Normalized Enrichment Score (NES)-1.5086173
Nominal p-value0.0
FDR q-value0.018832875
FWER p-Value0.114
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_HYPOXIA   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PHKG1na453.6900.0276No
2STC2na3132.6470.0351No
3MAFFna4752.3760.0459No
4COL5A1na9351.9210.0374No
5ENO3na12771.7020.0333No
6CHST2na13021.6890.0458No
7DUSP1na13641.6450.0559No
8EXT1na14631.5980.0638No
9PPP1R15Ana15611.5460.0712No
10ANGPTL4na16651.5050.0780No
11IRS2na18211.4350.0816No
12JUNna19921.3660.0837No
13DDIT3na23461.2250.0751No
14ATF3na25831.1500.0721No
15SCARB1na26931.1190.0754No
16TPST2na34360.9300.0440No
17GPC1na35000.9180.0481No
18FOXO3na36880.8730.0454No
19PPFIA4na39140.8300.0403No
20ILVBLna39170.8290.0470No
21B3GALT6na39410.8240.0524No
22NDST1na44040.7320.0341No
23PYGMna47840.6620.0196No
24TPBGna48140.6560.0234No
25NEDD4Lna48430.6500.0272No
26PRKCAna48760.6460.0308No
27HDLBPna49840.6290.0303No
28CHST3na51260.6100.0278No
29TIPARPna54380.5630.0160No
30EGFRna55000.5520.0173No
31PFKLna56440.5330.0141No
32CDKN1Bna60430.481-0.0029No
33FOSna61670.461-0.0056No
34JMJD6na62980.445-0.0088No
35VHLna64950.416-0.0157No
36CTGFna68940.371-0.0336No
37TNFAIP3na69800.364-0.0351No
38IL6na72440.333-0.0462No
39SLC37A4na72610.331-0.0444No
40HEXAna74410.314-0.0512No
41AMPD3na74720.311-0.0503No
42BCL2na76230.289-0.0558No
43FOSL2na76390.286-0.0543No
44CDKN1Cna78260.269-0.0619No
45NAGKna79160.260-0.0644No
46PPP1R3Cna79870.249-0.0661No
47HOXB9na81510.240-0.0727No
48PIM1na82190.229-0.0744No
49SLC6A6na82430.227-0.0737No
50CPna83170.218-0.0758No
51SDC3na85220.202-0.0849No
52ADORA2Bna86110.191-0.0879No
53NDST2na87590.171-0.0943No
54PFKFB3na88640.157-0.0985No
55STBD1na90330.149-0.1061No
56F3na90900.142-0.1079No
57KDM3Ana94050.105-0.1235No
58ADMna96460.081-0.1355No
59ANKZF1na98190.062-0.1440No
60BCANna98700.056-0.1462No
61PGFna101230.025-0.1592No
62GAAna101430.023-0.1600No
63GCNT2na103330.014-0.1698No
64MAP3K1na104250.004-0.1746No
65DTNAna10478-0.002-0.1773No
66GRHPRna10557-0.011-0.1813No
67ZFP36na10619-0.019-0.1843No
68GYS1na10792-0.037-0.1931No
69P4HA2na10841-0.045-0.1952No
70PDK1na10844-0.045-0.1950No
71ENO2na11078-0.075-0.2066No
72NR3C1na11080-0.075-0.2061No
73IGFBP1na11345-0.095-0.2191No
74GPIna11431-0.105-0.2228No
75PFKPna11433-0.105-0.2220No
76PLAURna11509-0.112-0.2250No
77TGFB3na11572-0.122-0.2272No
78SIAH2na11609-0.127-0.2281No
79CDKN1Ana11746-0.145-0.2341No
80SELENBP1na11758-0.146-0.2335No
81MT1Ena11922-0.166-0.2407No
82ETS1na12310-0.215-0.2593No
83KLF6na12855-0.265-0.2857No
84SLC25A1na13006-0.284-0.2913No
85EFNA1na13011-0.285-0.2891No
86AKAP12na13048-0.290-0.2887No
87XPNPEP1na13136-0.304-0.2908No
88SLC2A5na13246-0.316-0.2939No
89ZNF292na13298-0.325-0.2940No
90FBP1na13369-0.333-0.2950No
91PDGFBna13460-0.347-0.2969No
92SDC4na13470-0.349-0.2945No
93KLF7na13490-0.352-0.2926No
94BHLHE40na13518-0.356-0.2912No
95PGM2na13527-0.357-0.2887No
96CSRP2na13680-0.382-0.2936No
97ISG20na13723-0.391-0.2926No
98HSPA5na13730-0.393-0.2897No
99TGM2na13799-0.403-0.2900No
100GALK1na14078-0.428-0.3012No
101INHAna14275-0.458-0.3077No
102CCNG2na14302-0.464-0.3053No
103DDIT4na14408-0.478-0.3070No
104CITED2na14498-0.490-0.3077No
105PNRC1na14528-0.496-0.3052No
106EFNA3na14572-0.502-0.3034No
107WSB1na14978-0.558-0.3201Yes
108HK1na15003-0.562-0.3168Yes
109WISP2na15043-0.569-0.3142Yes
110SDC2na15052-0.571-0.3100Yes
111SLC2A1na15114-0.583-0.3085Yes
112SAP30na15285-0.614-0.3124Yes
113ALDOAna15303-0.618-0.3083Yes
114HMOX1na15431-0.638-0.3098Yes
115TPI1na15532-0.658-0.3097Yes
116HK2na15767-0.695-0.3163Yes
117BTG1na15833-0.711-0.3140Yes
118HS3ST1na16034-0.755-0.3184Yes
119CA12na16047-0.759-0.3128Yes
120PLAC8na16134-0.774-0.3110Yes
121IGFBP3na16184-0.784-0.3073Yes
122KLHL24na16186-0.785-0.3009Yes
123STC1na16195-0.787-0.2950Yes
124NFIL3na16230-0.795-0.2903Yes
125EDN2na16304-0.811-0.2875Yes
126CAV1na16368-0.825-0.2841Yes
127P4HA1na16447-0.842-0.2814Yes
128PGM1na16509-0.856-0.2777Yes
129PPARGC1Ana16612-0.876-0.2759Yes
130TGFBIna16797-0.927-0.2780Yes
131SLC2A3na16869-0.946-0.2741Yes
132MT2Ana17171-1.038-0.2815Yes
133ATP7Ana17248-1.066-0.2768Yes
134PRDX5na17276-1.076-0.2695Yes
135RRAGDna17307-1.086-0.2622Yes
136PAMna17315-1.089-0.2537Yes
137UGP2na17321-1.092-0.2451Yes
138LOXna17344-1.100-0.2374Yes
139PLIN2na17478-1.144-0.2351Yes
140VLDLRna17499-1.153-0.2268Yes
141PDK3na17601-1.198-0.2223Yes
142NDRG1na17623-1.208-0.2136Yes
143RBPJna17645-1.218-0.2048Yes
144TPD52na17682-1.234-0.1967Yes
145TESna17844-1.305-0.1946Yes
146IDSna17889-1.328-0.1861Yes
147ALDOCna18115-1.452-0.1861Yes
148RORAna18188-1.490-0.1778Yes
149AK4na18295-1.561-0.1707Yes
150KDELR3na18309-1.571-0.1586Yes
151ERRFI1na18341-1.595-0.1473Yes
152CASP6na18493-1.701-0.1414Yes
153GLRXna18498-1.703-0.1278Yes
154SRPXna18537-1.735-0.1157Yes
155MXI1na18597-1.777-0.1043Yes
156GBE1na18637-1.827-0.0915Yes
157BNIP3Lna18688-1.884-0.0789Yes
158FAM162Ana18694-1.889-0.0638Yes
159TMEM45Ana18709-1.902-0.0491Yes
160CXCR4na18827-2.050-0.0386Yes
161PGK1na18894-2.154-0.0245Yes
162LXNna18938-2.243-0.0086Yes
163S100A4na19100-2.7310.0051Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_HYPOXIA   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_HYPOXIA: Random ES distribution   
Gene set null distribution of ES for HALLMARK_HYPOXIA