Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)-0.3473968
Normalized Enrichment Score (NES)-1.6035224
Nominal p-value0.0
FDR q-value0.009755166
FWER p-Value0.103
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_ALLOGRAFT_REJECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL11na572.5700.0205No
2IL18na1522.2020.0357No
3IL12Ana1702.1710.0547No
4NME1na7641.6030.0382No
5ABCE1na10231.5060.0385No
6MRPL3na11171.4730.0471No
7EIF3Dna12211.4350.0548No
8EGFRna12411.4290.0669No
9RARSna12611.4240.0789No
10NLRP3na13761.3860.0856No
11ETS1na14161.3720.0961No
12EIF3Jna14741.3550.1055No
13CD8Ana15481.3340.1138No
14BRCA1na16201.3120.1221No
15IGSF6na18671.2530.1207No
16UBE2Nna18781.2510.1316No
17CCND3na22411.1690.1233No
18SRGNna23641.1420.1274No
19MTIF2na24541.1220.1330No
20TAP2na24981.1120.1409No
21RPS19na25211.1070.1498No
22CSKna29511.0340.1368No
23GCNT1na33200.9670.1264No
24EIF5Ana35380.9300.1235No
25HLA-DOBna37960.8840.1181No
26GALNT1na42390.8170.1024No
27RPL9na43590.7990.1035No
28DEGS1na46690.7530.0942No
29RPS3Ana51410.6860.0758No
30STAT1na54480.6450.0656No
31ELF4na55690.6300.0651No
32BCAT1na56140.6240.0685No
33HDAC9na60020.5700.0534No
34RPS9na62330.5360.0463No
35FASna62660.5320.0495No
36JAK2na64380.5100.0452No
37DARSna64510.5080.0492No
38IL27RAna70900.4350.0197No
39TRAF2na71390.4280.0211No
40F2Rna74300.3930.0095No
41DYRK3na74840.3870.0103No
42AARSna75840.3750.0085No
43LYNna76690.3660.0075No
44MAP3K7na77590.3550.0060No
45TPD52na78210.3470.0060No
46GLMNna79210.3350.0039No
47TGFB2na81170.315-0.0034No
48EIF3Ana81400.312-0.0017No
49ABI1na84740.275-0.0167No
50AKT1na86680.251-0.0245No
51TLR1na87810.239-0.0282No
52TLR6na88740.227-0.0309No
53RPL39na89700.216-0.0339No
54NCK1na90820.204-0.0379No
55INHBAna101500.088-0.0930No
56TLR3na101600.087-0.0927No
57HIF1Ana11136-0.018-0.1436No
58ACVR2Ana11326-0.042-0.1531No
59SOCS5na11349-0.045-0.1539No
60INHBBna11465-0.058-0.1593No
61CD40na11978-0.123-0.1851No
62WARSna12021-0.127-0.1861No
63EIF4G3na12565-0.193-0.2128No
64LIFna12907-0.232-0.2285No
65LY75na12984-0.242-0.2303No
66HCLS1na13062-0.251-0.2320No
67IL7na13349-0.295-0.2443No
68HLA-DQA1na13363-0.297-0.2423No
69IFNAR2na13468-0.310-0.2449No
70CAPGna14567-0.458-0.2983No
71IRF7na14815-0.500-0.3066No
72PRKCGna15097-0.528-0.3165No
73PTPN6na15123-0.532-0.3130No
74TLR2na15128-0.535-0.3083No
75CCL2na15276-0.560-0.3109No
76RIPK2na15343-0.573-0.3091No
77TNFna15826-0.653-0.3284No
78IL15na15840-0.654-0.3231No
79ST8SIA4na16024-0.691-0.3264No
80IKBKBna16100-0.704-0.3239No
81ACHEna16288-0.755-0.3268No
82SOCS1na16397-0.781-0.3253No
83BCL10na16617-0.838-0.3291No
84EREGna16952-0.936-0.3381No
85ICOSLGna17131-0.989-0.3384Yes
86IFNGR1na17299-1.042-0.3376Yes
87ITGB2na17342-1.055-0.3301Yes
88CCND2na17385-1.070-0.3226Yes
89TAP1na17413-1.084-0.3141Yes
90TGFB1na17599-1.148-0.3133Yes
91TIMP1na17600-1.148-0.3028Yes
92PSMB10na17606-1.151-0.2925Yes
93TAPBPna17642-1.164-0.2837Yes
94CRTAMna17700-1.186-0.2758Yes
95CFPna17862-1.258-0.2728Yes
96ICAM1na17954-1.306-0.2656Yes
97HLA-Ena18047-1.349-0.2581Yes
98BCL3na18068-1.364-0.2467Yes
99HLA-Gna18076-1.368-0.2345Yes
100IL4Rna18107-1.380-0.2235Yes
101APBB1na18115-1.382-0.2112Yes
102IL1Bna18217-1.433-0.2034Yes
103CD74na18418-1.591-0.1994Yes
104IFNGR2na18421-1.594-0.1849Yes
105UBE2D1na18424-1.599-0.1704Yes
106CD47na18478-1.626-0.1583Yes
107HLA-DMBna18502-1.645-0.1445Yes
108B2Mna18622-1.775-0.1345Yes
109HLA-DOAna18684-1.870-0.1206Yes
110LTBna18739-1.948-0.1056Yes
111HLA-DMAna18758-1.979-0.0885Yes
112IL6na18776-2.020-0.0709Yes
113C2na18918-2.345-0.0568Yes
114GBP2na18974-2.541-0.0365Yes
115CTSSna18977-2.550-0.0133Yes
116HLA-DRAna19014-2.7140.0096Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_ALLOGRAFT_REJECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_ALLOGRAFT_REJECTION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_ALLOGRAFT_REJECTION