Dataset | expr.class.cls#HYD_versus_CONTROL.class.cls#HYD_versus_CONTROL_repos |
Phenotype | class.cls#HYD_versus_CONTROL_repos |
Upregulated in class | CONTROL |
GeneSet | HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION |
Enrichment Score (ES) | -0.2137201 |
Normalized Enrichment Score (NES) | -0.9971643 |
Nominal p-value | 0.46153846 |
FDR q-value | 0.4847154 |
FWER p-Value | 0.994 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | COL16A1 | na | 8 | 4.252 | 0.0368 | No | ||
2 | COL7A1 | na | 428 | 2.435 | 0.0361 | No | ||
3 | COL1A1 | na | 499 | 2.347 | 0.0530 | No | ||
4 | COL8A2 | na | 580 | 2.237 | 0.0684 | No | ||
5 | COL5A1 | na | 935 | 1.921 | 0.0666 | No | ||
6 | SNTB1 | na | 1134 | 1.775 | 0.0718 | No | ||
7 | TAGLN | na | 1147 | 1.771 | 0.0866 | No | ||
8 | BASP1 | na | 1247 | 1.713 | 0.0964 | No | ||
9 | TPM2 | na | 1256 | 1.709 | 0.1110 | No | ||
10 | ECM2 | na | 1285 | 1.696 | 0.1244 | No | ||
11 | ID2 | na | 1383 | 1.637 | 0.1336 | No | ||
12 | COL4A2 | na | 1514 | 1.570 | 0.1405 | No | ||
13 | PVR | na | 1551 | 1.551 | 0.1522 | No | ||
14 | ACTA2 | na | 1554 | 1.549 | 0.1657 | No | ||
15 | VEGFC | na | 1636 | 1.517 | 0.1747 | No | ||
16 | GADD45B | na | 1972 | 1.375 | 0.1692 | No | ||
17 | JUN | na | 1992 | 1.366 | 0.1801 | No | ||
18 | COL5A2 | na | 2317 | 1.233 | 0.1739 | No | ||
19 | GADD45A | na | 2424 | 1.200 | 0.1788 | No | ||
20 | EFEMP2 | na | 2427 | 1.200 | 0.1892 | No | ||
21 | MYLK | na | 2690 | 1.120 | 0.1853 | No | ||
22 | SLC6A8 | na | 3116 | 1.006 | 0.1718 | No | ||
23 | ADAM12 | na | 3349 | 0.953 | 0.1680 | No | ||
24 | LOXL1 | na | 3490 | 0.920 | 0.1687 | No | ||
25 | GPC1 | na | 3500 | 0.918 | 0.1762 | No | ||
26 | LAMA2 | na | 3545 | 0.908 | 0.1819 | No | ||
27 | COL6A3 | na | 3618 | 0.889 | 0.1859 | No | ||
28 | TNFRSF12A | na | 3645 | 0.883 | 0.1922 | No | ||
29 | HTRA1 | na | 3847 | 0.842 | 0.1891 | No | ||
30 | COL4A1 | na | 3868 | 0.840 | 0.1954 | No | ||
31 | NID2 | na | 4308 | 0.750 | 0.1789 | No | ||
32 | PMEPA1 | na | 4320 | 0.748 | 0.1849 | No | ||
33 | APLP1 | na | 4385 | 0.735 | 0.1879 | No | ||
34 | PLOD3 | na | 4440 | 0.726 | 0.1915 | No | ||
35 | ITGB5 | na | 4750 | 0.668 | 0.1811 | No | ||
36 | OXTR | na | 4918 | 0.638 | 0.1779 | No | ||
37 | MCM7 | na | 5533 | 0.548 | 0.1505 | No | ||
38 | FBLN1 | na | 5556 | 0.544 | 0.1541 | No | ||
39 | LAMA3 | na | 5687 | 0.527 | 0.1519 | No | ||
40 | BMP1 | na | 5841 | 0.508 | 0.1483 | No | ||
41 | FSTL3 | na | 6052 | 0.480 | 0.1414 | No | ||
42 | QSOX1 | na | 6228 | 0.455 | 0.1362 | No | ||
43 | LRP1 | na | 6291 | 0.446 | 0.1369 | No | ||
44 | PTX3 | na | 6358 | 0.435 | 0.1372 | No | ||
45 | BDNF | na | 6575 | 0.406 | 0.1294 | No | ||
46 | CTGF | na | 6894 | 0.371 | 0.1160 | No | ||
47 | TNFAIP3 | na | 6980 | 0.364 | 0.1147 | No | ||
48 | IL6 | na | 7244 | 0.333 | 0.1038 | No | ||
49 | TGFBR3 | na | 7615 | 0.290 | 0.0869 | No | ||
50 | ELN | na | 7690 | 0.284 | 0.0856 | No | ||
51 | CXCL1 | na | 7814 | 0.270 | 0.0815 | No | ||
52 | COL12A1 | na | 7870 | 0.265 | 0.0809 | No | ||
53 | COL1A2 | na | 8100 | 0.246 | 0.0710 | No | ||
54 | MYL9 | na | 8250 | 0.226 | 0.0652 | No | ||
55 | COL6A2 | na | 8304 | 0.219 | 0.0643 | No | ||
56 | FZD8 | na | 8335 | 0.215 | 0.0646 | No | ||
57 | NOTCH2 | na | 8394 | 0.208 | 0.0634 | No | ||
58 | FBN1 | na | 8665 | 0.184 | 0.0508 | No | ||
59 | TNC | na | 9035 | 0.149 | 0.0328 | No | ||
60 | SNAI2 | na | 9111 | 0.139 | 0.0301 | No | ||
61 | LOXL2 | na | 9224 | 0.126 | 0.0253 | No | ||
62 | RHOB | na | 9250 | 0.124 | 0.0250 | No | ||
63 | LAMC1 | na | 9285 | 0.120 | 0.0243 | No | ||
64 | CALD1 | na | 9689 | 0.077 | 0.0038 | No | ||
65 | FUCA1 | na | 9835 | 0.060 | -0.0033 | No | ||
66 | PDGFRB | na | 9922 | 0.051 | -0.0073 | No | ||
67 | TGFB1 | na | 9937 | 0.048 | -0.0076 | No | ||
68 | TNFRSF11B | na | 10126 | 0.025 | -0.0173 | No | ||
69 | RGS4 | na | 10151 | 0.021 | -0.0184 | No | ||
70 | MATN3 | na | 10494 | -0.004 | -0.0363 | No | ||
71 | TPM1 | na | 10625 | -0.019 | -0.0429 | No | ||
72 | MATN2 | na | 10705 | -0.030 | -0.0468 | No | ||
73 | MAGEE1 | na | 10811 | -0.039 | -0.0520 | No | ||
74 | LRRC15 | na | 10849 | -0.046 | -0.0535 | No | ||
75 | SDC1 | na | 11066 | -0.073 | -0.0642 | No | ||
76 | ENO2 | na | 11078 | -0.075 | -0.0641 | No | ||
77 | CD44 | na | 11081 | -0.075 | -0.0636 | No | ||
78 | SERPINE2 | na | 11398 | -0.100 | -0.0793 | No | ||
79 | PLAUR | na | 11509 | -0.112 | -0.0841 | No | ||
80 | THBS2 | na | 11641 | -0.131 | -0.0898 | No | ||
81 | SERPINH1 | na | 11747 | -0.145 | -0.0941 | No | ||
82 | LAMC2 | na | 11847 | -0.157 | -0.0979 | No | ||
83 | MMP3 | na | 11975 | -0.170 | -0.1031 | No | ||
84 | ABI3BP | na | 11996 | -0.172 | -0.1026 | No | ||
85 | SLIT2 | na | 12028 | -0.177 | -0.1027 | No | ||
86 | CAP2 | na | 12189 | -0.199 | -0.1094 | No | ||
87 | PDLIM4 | na | 12197 | -0.199 | -0.1080 | No | ||
88 | PPIB | na | 12340 | -0.219 | -0.1135 | No | ||
89 | MEST | na | 12346 | -0.220 | -0.1119 | No | ||
90 | PLOD1 | na | 12612 | -0.235 | -0.1237 | No | ||
91 | DKK1 | na | 12791 | -0.256 | -0.1308 | No | ||
92 | FAS | na | 12828 | -0.261 | -0.1304 | No | ||
93 | IL32 | na | 12998 | -0.283 | -0.1368 | No | ||
94 | ITGA5 | na | 13121 | -0.302 | -0.1406 | No | ||
95 | FSTL1 | na | 13295 | -0.325 | -0.1468 | No | ||
96 | VCAN | na | 13320 | -0.327 | -0.1452 | No | ||
97 | TIMP3 | na | 13429 | -0.342 | -0.1479 | No | ||
98 | SDC4 | na | 13470 | -0.349 | -0.1469 | No | ||
99 | INHBA | na | 13523 | -0.357 | -0.1465 | No | ||
100 | SAT1 | na | 13558 | -0.362 | -0.1452 | No | ||
101 | WIPF1 | na | 13585 | -0.367 | -0.1433 | No | ||
102 | ECM1 | na | 13763 | -0.397 | -0.1491 | No | ||
103 | FERMT2 | na | 13772 | -0.398 | -0.1461 | No | ||
104 | TGM2 | na | 13799 | -0.403 | -0.1439 | No | ||
105 | WNT5A | na | 13835 | -0.411 | -0.1421 | No | ||
106 | GPX7 | na | 14117 | -0.430 | -0.1531 | No | ||
107 | MMP1 | na | 14272 | -0.457 | -0.1572 | No | ||
108 | COPA | na | 14280 | -0.459 | -0.1536 | No | ||
109 | PRSS2 | na | 14392 | -0.476 | -0.1552 | No | ||
110 | CDH11 | na | 14430 | -0.480 | -0.1530 | No | ||
111 | TIMP1 | na | 14560 | -0.499 | -0.1554 | No | ||
112 | PCOLCE | na | 14708 | -0.524 | -0.1585 | No | ||
113 | IL15 | na | 15098 | -0.579 | -0.1738 | No | ||
114 | PCOLCE2 | na | 15318 | -0.621 | -0.1799 | No | ||
115 | SPOCK1 | na | 15503 | -0.651 | -0.1839 | No | ||
116 | CAPG | na | 15558 | -0.662 | -0.1809 | No | ||
117 | EMP3 | na | 15769 | -0.696 | -0.1858 | No | ||
118 | IGFBP3 | na | 16184 | -0.784 | -0.2007 | No | ||
119 | ITGB3 | na | 16433 | -0.839 | -0.2064 | Yes | ||
120 | TFPI2 | na | 16544 | -0.865 | -0.2046 | Yes | ||
121 | CADM1 | na | 16551 | -0.866 | -0.1973 | Yes | ||
122 | PFN2 | na | 16639 | -0.883 | -0.1941 | Yes | ||
123 | DAB2 | na | 16686 | -0.894 | -0.1887 | Yes | ||
124 | CTHRC1 | na | 16722 | -0.905 | -0.1826 | Yes | ||
125 | TGFBI | na | 16797 | -0.927 | -0.1784 | Yes | ||
126 | PRRX1 | na | 16827 | -0.933 | -0.1717 | Yes | ||
127 | PTHLH | na | 16928 | -0.964 | -0.1686 | Yes | ||
128 | ITGAV | na | 16980 | -0.980 | -0.1627 | Yes | ||
129 | VCAM1 | na | 16995 | -0.984 | -0.1548 | Yes | ||
130 | NNMT | na | 17005 | -0.985 | -0.1466 | Yes | ||
131 | GLIPR1 | na | 17082 | -1.010 | -0.1418 | Yes | ||
132 | TPM4 | na | 17203 | -1.053 | -0.1389 | Yes | ||
133 | SPARC | na | 17223 | -1.058 | -0.1306 | Yes | ||
134 | ITGA2 | na | 17270 | -1.074 | -0.1236 | Yes | ||
135 | PLOD2 | na | 17330 | -1.095 | -0.1171 | Yes | ||
136 | LOX | na | 17344 | -1.100 | -0.1082 | Yes | ||
137 | GEM | na | 17475 | -1.142 | -0.1050 | Yes | ||
138 | SCG2 | na | 17637 | -1.216 | -0.1028 | Yes | ||
139 | CALU | na | 17764 | -1.268 | -0.0983 | Yes | ||
140 | SFRP1 | na | 17943 | -1.343 | -0.0959 | Yes | ||
141 | AREG | na | 18122 | -1.456 | -0.0925 | Yes | ||
142 | LGALS1 | na | 18128 | -1.458 | -0.0800 | Yes | ||
143 | DPYSL3 | na | 18168 | -1.479 | -0.0691 | Yes | ||
144 | VIM | na | 18288 | -1.557 | -0.0617 | Yes | ||
145 | NT5E | na | 18421 | -1.652 | -0.0542 | Yes | ||
146 | PMP22 | na | 18769 | -1.973 | -0.0551 | Yes | ||
147 | SGCB | na | 18835 | -2.064 | -0.0405 | Yes | ||
148 | EDIL3 | na | 18897 | -2.163 | -0.0247 | Yes | ||
149 | GJA1 | na | 18902 | -2.173 | -0.0059 | Yes | ||
150 | CD59 | na | 19031 | -2.444 | 0.0088 | Yes |