Datasetexpr.class.cls#HYD_versus_CONTROL.class.cls#HYD_versus_CONTROL_repos
Phenotypeclass.cls#HYD_versus_CONTROL_repos
Upregulated in classHYD
GeneSetHALLMARK_P53_PATHWAY
Enrichment Score (ES)0.19754215
Normalized Enrichment Score (NES)0.8099284
Nominal p-value0.88780487
FDR q-value0.9735729
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_P53_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PLK3na1453.1110.0150Yes
2RAD9Ana3002.6710.0263Yes
3PVT1na4012.4700.0390Yes
4PDGFAna4842.3610.0519Yes
5IER5na7192.0980.0549Yes
6FBXW7na8551.9910.0622Yes
7NOTCH1na10561.8350.0651Yes
8PLXNB2na10601.8330.0782Yes
9IRAK1na10921.8080.0898Yes
10UPP1na13071.6850.0908Yes
11JAG2na13751.6400.0992Yes
12PPP1R15Ana15611.5460.1007Yes
13RAB40Cna15961.5330.1101Yes
14HEXIM1na16511.5090.1182Yes
15BAIAP2na16571.5080.1289Yes
16ADAna19381.3920.1243Yes
17JUNna19921.3660.1314Yes
18DDIT3na23461.2250.1218Yes
19POM121na23971.2090.1280Yes
20GADD45Ana24241.2000.1353Yes
21DEF6na24261.2000.1440Yes
22EPHA2na25601.1560.1454Yes
23ATF3na25831.1500.1526Yes
24XPCna26771.1240.1559Yes
25TNFSF9na28481.0720.1548Yes
26SESN1na29051.0620.1595Yes
27TCHHna31970.9880.1514Yes
28RXRAna32650.9720.1550Yes
29WRAP73na33080.9640.1598Yes
30GPX2na33190.9610.1662Yes
31ST14na34330.9310.1671Yes
32SPHK1na34520.9270.1729Yes
33FDXRna36320.8860.1699Yes
34DDB2na36760.8750.1740Yes
35FOXO3na36880.8730.1798Yes
36SLC3A2na37170.8680.1846Yes
37EPS8L2na37320.8620.1901Yes
38HRASna38050.8500.1925Yes
39CSRNP2na38750.8380.1950Yes
40OSGIN1na40560.8000.1914Yes
41NUPR1na43510.7410.1813Yes
42PLK2na44740.7210.1801Yes
43ABCC5na45700.6970.1802Yes
44AENna46610.6830.1804Yes
45KRT17na48660.6470.1744Yes
46BMP2na48910.6430.1778Yes
47VDRna48980.6410.1822Yes
48RRP8na49030.6400.1866Yes
49BAXna49240.6380.1902Yes
50AK1na49270.6380.1948Yes
51TSPYL2na49910.6280.1960Yes
52LIFna50940.6140.1951Yes
53IFI30na52580.5920.1908Yes
54PMM1na52930.5860.1933Yes
55TRAF4na53280.5790.1957Yes
56RNF19Bna53740.5730.1975Yes
57RGS16na55020.5520.1949No
58HBEGFna55670.5420.1955No
59ANKRA2na57240.5220.1910No
60CYFIP2na57870.5150.1915No
61RHBDF2na60070.4840.1835No
62TPD52L1na60470.4800.1850No
63FOSna61670.4610.1821No
64INHBBna65680.4070.1640No
65DCXRna67940.3840.1550No
66RALGDSna69740.3640.1482No
67MXD4na71230.3450.1429No
68KLF4na71850.3410.1422No
69KIF13Bna72730.3290.1400No
70RRADna74810.3100.1314No
71CDK5R1na76440.2860.1250No
72BTG2na77020.2840.1240No
73POLHna77670.2780.1227No
74MKNK2na81090.2460.1065No
75PHLDA3na81900.2340.1040No
76IP6K2na87360.1760.0767No
77BAK1na91010.1410.0586No
78RAD51Cna91230.1370.0584No
79PRKAB1na91700.1310.0570No
80SOCS1na93240.1130.0498No
81TP63na93580.1100.0488No
82TRIB3na94340.0990.0456No
83NUDT15na96050.0890.0373No
84CCND2na96090.0880.0378No
85IL1Ana96510.0800.0362No
86ABATna98130.0620.0282No
87FUCA1na98350.0600.0275No
88PTPREna98440.0590.0275No
89ERCC5na98590.0570.0272No
90TGFB1na99370.0480.0235No
91PTPN14na99440.0460.0235No
92DGKAna99530.0450.0234No
93CTSFna99700.0430.0229No
94EPHX1na100160.0380.0208No
95ITGB4na101640.0200.0132No
96CASP1na103020.0150.0062No
97BLCAPna103360.0140.0045No
98RETSATna104200.0050.0002No
99HDAC3na10467-0.001-0.0022No
100PRMT2na10538-0.008-0.0058No
101NINJ1na10608-0.017-0.0093No
102TAP1na10646-0.022-0.0111No
103SDC1na11066-0.073-0.0326No
104CCND3na11490-0.109-0.0541No
105CD81na11515-0.114-0.0545No
106STEAP3na11653-0.132-0.0607No
107CD82na11683-0.136-0.0613No
108H2AFJna11690-0.137-0.0606No
109CDKN1Ana11746-0.145-0.0624No
110CCNKna11824-0.154-0.0654No
111SFNna12185-0.198-0.0829No
112TAX1BP3na12259-0.208-0.0852No
113CTSDna12285-0.211-0.0850No
114VWA5Ana12806-0.258-0.1104No
115FASna12828-0.261-0.1096No
116NOL8na12894-0.271-0.1111No
117SLC7A11na12949-0.278-0.1119No
118ACVR1Bna13007-0.284-0.1128No
119SERTAD3na13111-0.300-0.1161No
120CGRRF1na13194-0.311-0.1181No
121DRAM1na13242-0.315-0.1183No
122LDHBna13307-0.326-0.1193No
123MXD1na13509-0.354-0.1273No
124SEC61A1na13535-0.358-0.1260No
125SAT1na13558-0.362-0.1245No
126ZFP36L1na13646-0.378-0.1263No
127APPna13765-0.397-0.1296No
128CCP110na14173-0.437-0.1479No
129SLC19A2na14203-0.441-0.1462No
130SP1na14317-0.467-0.1487No
131TSC22D1na14324-0.468-0.1456No
132ZMAT3na14337-0.469-0.1429No
133SLC35D1na14339-0.469-0.1395No
134MAPKAPK3na14391-0.475-0.1387No
135WWP1na14407-0.478-0.1360No
136DDIT4na14408-0.478-0.1326No
137HSPA4Lna14452-0.483-0.1313No
138TRAFD1na14581-0.503-0.1344No
139MDM2na14595-0.505-0.1314No
140PPM1Dna14788-0.536-0.1376No
141PROCRna14847-0.543-0.1367No
142TRIAP1na15000-0.562-0.1406No
143PITPNC1na15035-0.567-0.1383No
144APAF1na15381-0.631-0.1518No
145TCN2na15404-0.635-0.1483No
146HMOX1na15431-0.638-0.1451No
147ABHD4na15481-0.647-0.1429No
148RAP2Bna15504-0.651-0.1394No
149CDKN2AIPna15782-0.699-0.1488No
150BTG1na15833-0.711-0.1463No
151RPL18na15882-0.720-0.1436No
152PCNAna15928-0.728-0.1407No
153STOMna15937-0.731-0.1358No
154EI24na16083-0.766-0.1378No
155DNTTIP2na16169-0.782-0.1366No
156ISCUna16260-0.800-0.1355No
157RB1na16313-0.813-0.1323No
158HINT1na16615-0.878-0.1418No
159TP53na16860-0.944-0.1477No
160GM2Ana17215-1.057-0.1587No
161HIST1H1Cna17481-1.146-0.1643No
162TXNIPna17600-1.197-0.1618No
163RPL36na17619-1.206-0.1539No
164NDRG1na17623-1.208-0.1453No
165RPS27Lna17831-1.300-0.1467No
166TOB1na17952-1.348-0.1432No
167TM7SF3na18054-1.419-0.1382No
168RCHY1na18153-1.468-0.1327No
169F2Rna18280-1.550-0.1280No
170TGFAna18621-1.808-0.1328No
171FAM162Ana18694-1.889-0.1228No
172PERPna18900-2.167-0.1178No
173TPRKBna18945-2.253-0.1038No
174RPS12na18989-2.312-0.0892No
175CCNG1na19060-2.553-0.0743No
176S100A10na19095-2.708-0.0564No
177S100A4na19100-2.731-0.0368No
178TM4SF1na19118-2.862-0.0168No
179VAMP8na19121-2.8870.0040No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_P53_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_P53_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_P53_PATHWAY