Datasetexpr.class.cls#HYDEGF_versus_CONTROL.class.cls#HYDEGF_versus_CONTROL_repos
Phenotypeclass.cls#HYDEGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_APICAL_JUNCTION
Enrichment Score (ES)-0.22911033
Normalized Enrichment Score (NES)-1.0519112
Nominal p-value0.33333334
FDR q-value0.3924778
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_APICAL_JUNCTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NEGR1na5272.094-0.0100No
2CDH4na6801.921-0.0018No
3ATP1A3na8661.7730.0034No
4CLDN15na9881.6970.0113No
5ACTN1na10891.6280.0198No
6NF2na12271.5550.0257No
7AMIGO2na13481.4950.0319No
8BAIAP2na13941.4700.0420No
9EGFRna13951.4700.0543No
10VAV2na14461.4500.0639No
11COL17A1na16041.3900.0674No
12PARD6Gna19071.2910.0624No
13AMIGO1na19961.2670.0684No
14HRASna20331.2570.0771No
15MYH10na20561.2500.0865No
16COL16A1na20591.2490.0969No
17EVLna23401.1670.0920No
18PLCG1na24141.1480.0979No
19MAP4K2na24231.1460.1071No
20PTK2na27051.0790.1014No
21SYMPKna27231.0740.1096No
22AKT2na27801.0560.1155No
23TSPAN4na28511.0400.1206No
24WNK4na28551.0390.1292No
25MAPK11na30520.9920.1273No
26AMHna31160.9770.1322No
27PKD1na31330.9730.1395No
28IKBKGna32280.9540.1426No
29LDLRAP1na32990.9430.1469No
30ZYXna33640.9290.1514No
31TAOK2na36260.8800.1451No
32NLGN3na37390.8570.1464No
33SHROOM2na37480.8560.1532No
34CLDN14na38510.8380.1549No
35MADCAM1na39960.8120.1542No
36SPEGna41160.7940.1546No
37RASA1na44130.7470.1454No
38IRS1na46220.7160.1405No
39CLDN9na46870.7090.1431No
40DLG1na48830.6700.1385No
41VASPna50620.6430.1346No
42NF1na51050.6360.1377No
43PIK3R3na51610.6270.1401No
44TSC1na51850.6230.1441No
45MAPK14na51970.6200.1488No
46INPPL1na52380.6150.1519No
47EXOC4na52490.6130.1565No
48JAM3na52750.6100.1603No
49EPB41L2na53300.5990.1625No
50NLGN2na54870.5770.1592No
51ICAM2na55020.5760.1633No
52PCDH1na55460.5710.1659No
53CD274na56860.5480.1632No
54GAMTna58430.5250.1594No
55VCLna63260.4600.1380No
56STX4na63770.4540.1392No
57FBN1na65350.4330.1346No
58LAYNna66210.4210.1337No
59CLDN18na67590.4010.1299No
60LIMA1na68370.3920.1291No
61MVDna69480.3790.1265No
62NEXNna73440.3230.1085No
63VCANna75330.3010.1012No
64PARVAna76600.2810.0969No
65ICAM5na79180.2530.0856No
66GNAI1na79720.2460.0849No
67CDSNna81560.2300.0772No
68DHX16na82030.2230.0766No
69TJP1na83110.2080.0728No
70MYL9na83220.2070.0740No
71TUBG1na85050.1860.0660No
72PPP2R2Cna87490.1580.0546No
73MAPK13na87830.1530.0541No
74SHC1na88000.1500.0546No
75THBS3na88050.1480.0556No
76TNFRSF11Bna88240.1440.0559No
77BMP1na93260.0850.0303No
78SIRPAna95180.0720.0209No
79CLDN11na96850.0510.0126No
80LAMB3na100150.019-0.0045No
81TIAL1na101130.003-0.0096No
82AKT3na101320.001-0.0105No
83CDK8na10247-0.016-0.0164No
84MPP5na10543-0.042-0.0315No
85CRATna10668-0.062-0.0375No
86SRCna10830-0.082-0.0452No
87GRB7na10907-0.096-0.0484No
88ITGB4na11077-0.118-0.0563No
89ADAM23na11119-0.118-0.0575No
90ADAM15na11195-0.122-0.0604No
91PBX2na11295-0.136-0.0644No
92YWHAHna11375-0.143-0.0674No
93CD276na11554-0.169-0.0753No
94HADHna11730-0.192-0.0829No
95ADRA1Bna11742-0.194-0.0818No
96CNN2na11756-0.197-0.0808No
97SDC3na11878-0.214-0.0854No
98CDH3na11901-0.214-0.0847No
99GTF2F1na12553-0.290-0.1165No
100CDH15na13079-0.352-0.1410No
101ADAM9na13107-0.354-0.1395No
102CD34na13109-0.355-0.1365No
103VCAM1na13271-0.382-0.1418No
104SORBS3na13406-0.404-0.1454No
105LAMA3na13513-0.415-0.1475No
106WASLna13566-0.423-0.1467No
107CDH1na13575-0.423-0.1435No
108PFN1na13723-0.445-0.1475No
109TMEM8Bna14230-0.509-0.1698No
110CERCAMna14360-0.531-0.1721No
111CTNNA1na14530-0.560-0.1762No
112NRTNna14832-0.609-0.1869No
113FSCN1na14874-0.615-0.1839No
114JUPna15173-0.664-0.1939No
115RHOFna15197-0.669-0.1895No
116CX3CL1na15637-0.749-0.2062No
117ARPC2na15866-0.794-0.2115No
118PIK3CBna15970-0.815-0.2101No
119ITGA10na16334-0.907-0.2215Yes
120RRASna16340-0.908-0.2141Yes
121PTENna16477-0.941-0.2133Yes
122CD99na16501-0.948-0.2065Yes
123MPZL1na16703-1.000-0.2087Yes
124TGFBIna16713-1.002-0.2007Yes
125TRAF1na16954-1.073-0.2043Yes
126MPZL2na17051-1.103-0.2000Yes
127ICAM1na17147-1.127-0.1955Yes
128RAC2na17178-1.137-0.1875Yes
129CTNND1na17207-1.147-0.1794Yes
130INSIG1na17226-1.153-0.1706Yes
131GNAI2na17280-1.174-0.1635Yes
132SLIT2na17519-1.266-0.1653Yes
133RSU1na17803-1.387-0.1685Yes
134CLDN4na17975-1.476-0.1651Yes
135B4GALT1na18015-1.493-0.1545Yes
136CLDN7na18127-1.564-0.1472Yes
137MYL12Bna18144-1.575-0.1348Yes
138CALB2na18210-1.607-0.1247Yes
139CAP1na18502-1.837-0.1245Yes
140SKAP2na18509-1.844-0.1093Yes
141LAMC2na18772-2.148-0.1049Yes
142ARHGEF6na18833-2.255-0.0891Yes
143CDH11na18932-2.418-0.0739Yes
144ITGA2na18964-2.492-0.0545Yes
145SGCEna18996-2.570-0.0345Yes
146PECAM1na19026-2.661-0.0137Yes
147MDKna19037-2.6890.0085Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_APICAL_JUNCTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_APICAL_JUNCTION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_APICAL_JUNCTION