Datasetexpr.class.cls#HYDEGF_versus_CONTROL.class.cls#HYDEGF_versus_CONTROL_repos
Phenotypeclass.cls#HYDEGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_APOPTOSIS
Enrichment Score (ES)-0.42570043
Normalized Enrichment Score (NES)-1.9585303
Nominal p-value0.0
FDR q-value3.1089154E-4
FWER p-Value0.002
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_APOPTOSIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ATF3na4732.154-0.0093No
2DIABLOna4782.1500.0060No
3GADD45Bna5242.0960.0187No
4SMAD7na6062.0060.0290No
5SPTAN1na10421.6580.0181No
6WEE1na10661.6440.0287No
7TNFRSF12Ana11301.6110.0370No
8HMGB2na12301.5500.0430No
9CREBBPna13461.4950.0477No
10CCNA1na14421.4520.0532No
11LEF1na24381.1430.0093No
12EBPna26271.0970.0073No
13CCND1na26841.0840.0122No
14PTK2na27051.0790.0189No
15DDIT3na27481.0660.0244No
16GADD45Ana27981.0520.0294No
17ERBB2na30001.0040.0261No
18DFFAna30720.9870.0295No
19CTHna31580.9690.0320No
20MADDna35770.8880.0165No
21CDK2na36270.8800.0202No
22RHOT2na37050.8630.0224No
23BAXna37460.8560.0265No
24ROCK1na38500.8380.0271No
25CASP2na40030.8100.0250No
26PSEN2na45920.722-0.0006No
27PLCB2na46130.7190.0035No
28FDXRna48680.674-0.0050No
29DPYDna50470.645-0.0097No
30CD44na52930.607-0.0182No
31CDC25Bna53900.592-0.0189No
32JUNna56420.555-0.0281No
33SLC20A1na62500.469-0.0566No
34BRCA1na65970.424-0.0717No
35PPP2R5Bna69490.379-0.0873No
36DAP3na70470.366-0.0898No
37PDGFRBna73030.329-0.1008No
38TGFBR3na73260.326-0.0996No
39IL18na74820.306-0.1055No
40EGR3na77490.271-0.1175No
41RARAna87810.154-0.1705No
42PEA15na96310.057-0.2147No
43MCL1na100070.019-0.2342No
44BCL2L2na10286-0.019-0.2486No
45HMOX1na10412-0.037-0.2549No
46GSTM1na10755-0.073-0.2724No
47CASP8na11048-0.114-0.2869No
48IRF1na11060-0.115-0.2866No
49CYLDna11255-0.131-0.2958No
50CAV1na11391-0.145-0.3019No
51KRT18na11421-0.149-0.3023No
52ADD1na11543-0.167-0.3075No
53PAK1na11788-0.201-0.3188No
54FEZ1na11843-0.210-0.3201No
55RHOBna11865-0.214-0.3197No
56CFLARna12192-0.242-0.3351No
57ERBB3na12288-0.259-0.3382No
58H1F0na12323-0.265-0.3381No
59CASP1na12497-0.286-0.3451No
60RETSATna12706-0.315-0.3537No
61TOP2Ana12732-0.319-0.3527No
62DNM1Lna13067-0.352-0.3677No
63NEFHna13072-0.352-0.3654No
64TIMP2na13099-0.353-0.3642No
65PPT1na13258-0.379-0.3698No
66PMAIP1na13499-0.413-0.3794No
67ANKHna13596-0.424-0.3814No
68FASna13787-0.456-0.3881No
69SQSTM1na13980-0.486-0.3946No
70GNA15na14012-0.490-0.3927No
71BTG2na14115-0.493-0.3945No
72RELAna14142-0.496-0.3923No
73BCL2L1na14288-0.519-0.3962No
74GPX4na14401-0.538-0.3982No
75GPX1na14583-0.572-0.4035No
76BIKna14637-0.578-0.4022No
77CCND2na14645-0.580-0.3983No
78BMFna14669-0.585-0.3953No
79BTG3na14693-0.589-0.3923No
80ENO2na14703-0.591-0.3885No
81GCH1na14797-0.603-0.3891No
82ETF1na14811-0.605-0.3854No
83TNFna14846-0.611-0.3827No
84CDKN1Ana14882-0.616-0.3801No
85BCAP31na15001-0.633-0.3818No
86CASP7na15674-0.757-0.4116No
87CDKN1Bna15677-0.758-0.4062No
88ANXA1na15923-0.806-0.4133No
89DAPna16126-0.851-0.4177No
90CASP9na16279-0.893-0.4193Yes
91TSPOna16294-0.896-0.4135Yes
92GSNna16299-0.897-0.4073Yes
93IL1Ana16315-0.902-0.4016Yes
94BCL2L11na16361-0.913-0.3973Yes
95CD14na16500-0.948-0.3978Yes
96GSRna16589-0.967-0.3954Yes
97IGF2Rna16595-0.968-0.3887Yes
98TGFB2na16607-0.972-0.3823Yes
99TIMP1na16662-0.990-0.3780Yes
100GPX3na16764-1.015-0.3759Yes
101F2Rna16819-1.032-0.3713Yes
102VDAC2na16846-1.042-0.3652Yes
103PLATna16888-1.050-0.3598Yes
104IFITM3na16890-1.051-0.3523Yes
105TAP1na16995-1.089-0.3499Yes
106BIDna17292-1.178-0.3569Yes
107EMP1na17346-1.196-0.3511Yes
108CASP3na17375-1.207-0.3438Yes
109IGFBP6na17518-1.266-0.3422Yes
110HSPB1na17580-1.287-0.3361Yes
111PSEN1na17614-1.300-0.3284Yes
112TNFSF10na17691-1.328-0.3229Yes
113CASP4na17716-1.342-0.3144Yes
114NEDD9na17722-1.343-0.3050Yes
115PPP3R1na17792-1.378-0.2987Yes
116ISG20na17840-1.410-0.2910Yes
117BCL10na17922-1.452-0.2848Yes
118CTNNB1na17952-1.465-0.2758Yes
119IL1Bna18115-1.556-0.2730Yes
120IL6na18227-1.619-0.2672Yes
121XIAPna18281-1.662-0.2580Yes
122RNASELna18292-1.673-0.2465Yes
123LGALS3na18514-1.848-0.2447Yes
124PDCD4na18548-1.865-0.2330Yes
125CLUna18586-1.909-0.2212Yes
126BMP2na18629-1.962-0.2093Yes
127DNAJA1na18633-1.967-0.1953Yes
128EREGna18655-1.994-0.1820Yes
129APPna18704-2.052-0.1697Yes
130TIMP3na18706-2.053-0.1550Yes
131DNAJC3na18716-2.072-0.1405Yes
132SOD1na18910-2.370-0.1335Yes
133IFNGR1na18912-2.376-0.1165Yes
134BIRC3na18942-2.435-0.1004Yes
135CASP6na18952-2.470-0.0831Yes
136BNIP3Lna18957-2.475-0.0655Yes
137TXNIPna18972-2.510-0.0481Yes
138SOD2na18995-2.569-0.0308Yes
139SATB1na19008-2.600-0.0126Yes
140SAT1na19134-3.1310.0034Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_APOPTOSIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_APOPTOSIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_APOPTOSIS