Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classEGF
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.6168415
Normalized Enrichment Score (NES)2.8949919
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CDC25Ana1072.3120.0060Yes
2AURKAna1632.1810.0141Yes
3UCK2na1682.1730.0249Yes
4SLC7A5na2132.0740.0330Yes
5EZH2na2272.0530.0426Yes
6SLC7A1na3111.9360.0480Yes
7AURKBna3281.9160.0568Yes
8ODC1na4151.8350.0616Yes
9NOLC1na4431.8090.0693Yes
10BUB1na4551.7970.0777Yes
11CDC6na4721.7860.0859Yes
12CDKN3na5621.7290.0899Yes
13CDC20na5901.7120.0971Yes
14GINS2na5931.7090.1056Yes
15SUV39H1na6281.6860.1123Yes
16CDKN2Cna6351.6790.1205Yes
17PLK4na6501.6700.1281Yes
18CCNA2na7251.6260.1324Yes
19DDX39Ana7311.6210.1403Yes
20POLEna7601.6050.1470Yes
21POLQna7921.5940.1534Yes
22CDC45na7951.5930.1613Yes
23WRNna8151.5830.1683Yes
24PRIM2na8351.5750.1752Yes
25SRSF1na8631.5660.1817Yes
26NUP50na8771.5610.1888Yes
27MCM2na9061.5500.1952Yes
28TPX2na9971.5160.1981Yes
29CDC7na10011.5140.2055Yes
30PRC1na10541.4910.2103Yes
31PLK1na10741.4880.2168Yes
32KIF15na11271.4690.2215Yes
33HMGN2na11341.4660.2285Yes
34DKC1na11441.4640.2354Yes
35KIF23na11861.4450.2406Yes
36TACC3na12071.4390.2468Yes
37RBM14na12631.4240.2510Yes
38DTYMKna12861.4170.2570Yes
39CUL1na12881.4150.2641Yes
40RACGAP1na13101.4090.2701Yes
41BRCA2na13331.3990.2760Yes
42KIF11na13341.3990.2830Yes
43E2F1na13401.3950.2898Yes
44CCNFna13501.3930.2963Yes
45HMMRna13511.3930.3034Yes
46PRMT5na13601.3910.3099Yes
47TFDP1na13871.3810.3155Yes
48SMC4na14181.3720.3209Yes
49TRA2Bna14321.3690.3271Yes
50LMNB1na14331.3680.3340Yes
51BIRC5na14481.3640.3401Yes
52E2F2na14501.3640.3469Yes
53RBL1na15131.3420.3504Yes
54NUSAP1na15411.3350.3557Yes
55MCM6na16721.3010.3554Yes
56SLC12A2na16861.2970.3613Yes
57MAD2L1na16951.2960.3674Yes
58KIF4Ana17151.2910.3729Yes
59E2F3na17811.2730.3759Yes
60RASAL2na18231.2620.3801Yes
61SRSF2na18351.2600.3859Yes
62XPO1na18451.2590.3917Yes
63KPNA2na19251.2410.3938Yes
64LBRna19681.2300.3978Yes
65EXO1na19721.2270.4038Yes
66KIF2Cna19751.2270.4099Yes
67CENPFna19861.2240.4156Yes
68CBX1na20001.2200.4210Yes
69KIF20Bna20091.2170.4267Yes
70NUP98na20251.2140.4321Yes
71NDC80na20321.2120.4378Yes
72STAG1na20351.2120.4438Yes
73BARD1na20411.2110.4497Yes
74CKS1Bna20481.2070.4554Yes
75SMC2na20501.2070.4615Yes
76TMPOna20911.1990.4654Yes
77TOP2Ana21511.1890.4683Yes
78STILna21631.1860.4737Yes
79MCM3na21751.1830.4791Yes
80CENPEna21891.1810.4843Yes
81SNRPD1na22371.1710.4878Yes
82CUL4Ana22451.1680.4933Yes
83KPNB1na22531.1660.4988Yes
84BUB3na23281.1490.5007Yes
85DR1na23391.1470.5059Yes
86ORC6na23441.1460.5115Yes
87CHAF1Ana23671.1400.5161Yes
88FBXO5na23711.1390.5217Yes
89CCND1na24001.1330.5259Yes
90KIF22na24571.1220.5286Yes
91POLA2na25291.1050.5304Yes
92ESPL1na25771.0970.5335Yes
93DBF4na25871.0960.5385Yes
94UBE2Sna26711.0810.5396Yes
95AMD1na26801.0800.5446Yes
96RAD54Lna26961.0770.5493Yes
97G3BP1na27561.0680.5515Yes
98SRSF10na27821.0630.5556Yes
99CDK1na29211.0400.5536Yes
100CHEK1na29541.0340.5571Yes
101RAD23Bna29771.0300.5611Yes
102PBKna30381.0190.5631Yes
103E2F4na30901.0080.5655Yes
104MYBL2na30981.0070.5702Yes
105RPA2na31281.0010.5737Yes
106KIF5Bna31361.0000.5784Yes
107MAPK14na31870.9900.5807Yes
108MCM5na32020.9860.5850Yes
109NEK2na32220.9810.5889Yes
110TTKna32930.9710.5901Yes
111TRAIPna34110.9510.5888Yes
112SYNCRIPna34860.9390.5896Yes
113GSPT1na35570.9280.5906Yes
114NASPna35980.9210.5931Yes
115SMC1Ana36380.9150.5957Yes
116NCLna39000.8670.5863Yes
117MYCna39070.8660.5904Yes
118MNAT1na40110.8490.5892Yes
119H2AFZna40170.8480.5932Yes
120TROAPna40370.8450.5965Yes
121RAD21na40410.8440.6006Yes
122H2AFVna41850.8240.5972Yes
123ORC5na42980.8080.5954Yes
124FANCCna44160.7890.5932Yes
125SFPQna44310.7880.5965Yes
126MTF2na44470.7860.5996Yes
127CENPAna44510.7850.6034Yes
128KATNA1na44770.7800.6060Yes
129PAPD7na45320.7730.6071Yes
130YTHDC1na45810.7660.6084Yes
131UBE2Cna46570.7550.6083Yes
132UPF1na46730.7530.6113Yes
133STMN1na47390.7400.6116Yes
134CDK4na48010.7300.6121Yes
135ILF3na49020.7180.6104Yes
136SLC38A1na49390.7150.6121Yes
137PDS5Bna49490.7140.6153Yes
138CASP8AP2na50430.7020.6139Yes
139PTTG1na50550.7000.6168Yes
140CCNB2na51480.6850.6155No
141HNRNPUna52650.6700.6127No
142PURAna52950.6650.6145No
143CTCFna56900.6110.5969No
144CUL3na58540.5910.5913No
145NOTCH2na61440.5490.5789No
146H2AFXna61600.5470.5808No
147CKS2na63450.5220.5738No
148LIG3na63720.5170.5750No
149EGFna65970.4930.5657No
150SS18na67390.4750.5607No
151PRPF4Bna67890.4690.5605No
152ATF5na67910.4690.5628No
153FOXN3na73220.4060.5369No
154ODF2na73700.3990.5365No
155RPS6KA5na74800.3880.5327No
156HNRNPDna75350.3810.5318No
157CUL5na75470.3790.5331No
158CDC27na79970.3250.5111No
159EWSR1na80590.3190.5095No
160PAFAH1B1na82910.2940.4989No
161CCNT1na90700.2050.4590No
162MEIS2na92560.1870.4502No
163INCENPna94470.1640.4410No
164HIRAna101150.0940.4064No
165SMARCC1na102260.0780.4010No
166TNPO2na107300.0210.3746No
167CHMP1Ana109500.0020.3631No
168HIF1Ana11136-0.0180.3535No
169SQLEna11156-0.0210.3526No
170ABL1na11459-0.0570.3370No
171TOP1na11743-0.0910.3226No
172MEIS1na11987-0.1240.3104No
173CDC25Bna12061-0.1340.3072No
174HUS1na12612-0.2010.2793No
175SAP30na12691-0.2120.2763No
176CDKN1Bna13864-0.3600.2164No
177ATRXna13969-0.3720.2129No
178ARID4Ana14716-0.4830.1760No
179MT2Ana14804-0.4980.1740No
180HIST1H2BKna14950-0.5070.1689No
181SMAD3na15810-0.6500.1270No
182PMLna15940-0.6750.1236No
183TLE3na15944-0.6760.1268No
184EFNA5na16633-0.8410.0949No
185NUMA1na17337-1.0540.0632No
186TGFB1na17599-1.1480.0553No
187MARCKSna17808-1.2280.0505No
188DMDna17999-1.3290.0472No
189BCL3na18068-1.3640.0505No
190HMGB3na18612-1.7640.0308No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT