Datasetexpr.class.cls#HYDEGF_versus_CONTROL.class.cls#HYDEGF_versus_CONTROL_repos
Phenotypeclass.cls#HYDEGF_versus_CONTROL_repos
Upregulated in classHYDEGF
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.28925648
Normalized Enrichment Score (NES)1.3151469
Nominal p-value0.040453073
FDR q-value0.12852675
FWER p-Value0.816
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DDX39Ana1152.8600.0143Yes
2CENPMna1842.6330.0295Yes
3AURKBna2232.5340.0456Yes
4DNMT1na2482.4690.0619Yes
5TACC3na2712.4210.0780Yes
6CITna3372.3270.0912Yes
7ESPL1na3872.2480.1046Yes
8TIMELESSna6131.9950.1070Yes
9KIF18Bna6321.9760.1201Yes
10MCM2na7781.8470.1256Yes
11CDKN2Cna7811.8450.1387Yes
12NOP56na8371.7900.1485Yes
13TCF19na8991.7520.1578Yes
14WEE1na10661.6440.1608Yes
15MYBL2na11671.5890.1668Yes
16HMGB2na12301.5500.1746Yes
17EZH2na12411.5450.1851Yes
18MCM7na13221.5050.1916Yes
19POLA2na13471.4950.2010Yes
20POLD1na13501.4930.2116Yes
21POLEna13981.4680.2195Yes
22PNNna15421.4120.2221Yes
23KIF22na16741.3660.2249Yes
24CDC25Ana17071.3570.2329Yes
25CDCA8na17231.3510.2418Yes
26SPAG5na18441.3120.2448Yes
27GINS3na19131.2880.2504Yes
28TK1na20011.2650.2548Yes
29ILF3na20421.2530.2617Yes
30RAD50na20631.2480.2695Yes
31PLK4na24241.1460.2587Yes
32LIG1na25351.1190.2609Yes
33SMC1Ana25581.1130.2677Yes
34MCM5na26941.0820.2683Yes
35CDCA3na29931.0050.2598Yes
36CCNE1na30121.0010.2660Yes
37TBRG4na30400.9950.2716Yes
38MCM4na31250.9760.2742Yes
39MCM3na33250.9380.2704Yes
40WDR90na33830.9260.2740Yes
41SUV39H1na34190.9180.2787Yes
42H2AFXna34330.9160.2845Yes
43STAG1na35530.8920.2846Yes
44DIAPH3na37080.8630.2827Yes
45ATAD2na37820.8500.2849Yes
46UBE2Sna38140.8430.2893Yes
47PRPS1na40470.8040.2828No
48E2F8na41570.7900.2827No
49TRA2Bna42290.7770.2845No
50MYCna43140.7640.2855No
51SMC4na44140.7470.2856No
52DONSONna45390.7290.2843No
53CDC20na45670.7240.2880No
54UNGna47430.6980.2838No
55HELLSna49890.6530.2756No
56SPC24na51560.6290.2713No
57NCAPD2na53240.6000.2668No
58CDC25Bna53900.5920.2676No
59GINS1na54890.5770.2665No
60RFC2na55250.5730.2688No
61NUP153na55290.5720.2727No
62BARD1na56160.5590.2722No
63NOLC1na56640.5510.2736No
64PRIM2na56700.5510.2773No
65KIF2Cna57420.5380.2774No
66DSCC1na57840.5340.2790No
67PPM1Dna62190.4740.2596No
68ASF1Bna63630.4560.2553No
69AK2na63740.4550.2580No
70BRCA2na64060.4490.2596No
71MXD3na65340.4330.2560No
72BRCA1na65970.4240.2557No
73DCTPP1na66950.4120.2536No
74PRKDCna68280.3940.2494No
75RANBP1na68350.3930.2519No
76PPP1R8na70420.3670.2437No
77ING3na70730.3620.2447No
78PSMC3IPna71010.3580.2458No
79GINS4na71270.3560.2470No
80POLE4na72070.3420.2453No
81SMC6na72100.3420.2477No
82ZW10na73290.3250.2438No
83CHEK1na73310.3250.2460No
84PLK1na74700.3090.2410No
85KIF4Ana75390.3000.2395No
86CENPEna76080.2900.2380No
87SRSF1na76950.2800.2355No
88TFRCna79040.2550.2264No
89POLD2na79150.2540.2276No
90PAN2na79610.2480.2270No
91ASF1Ana81850.2270.2169No
92TUBG1na85050.1860.2015No
93PSIP1na85470.1810.2006No
94RACGAP1na85760.1770.2004No
95ORC2na85840.1760.2013No
96RFC3na85980.1740.2018No
97RPA1na86220.1680.2018No
98MTHFD2na87840.1520.1945No
99SNRPBna88120.1450.1941No
100MLH1na88800.1380.1915No
101CHEK2na90650.1200.1827No
102BIRC5na91470.1100.1792No
103LMNB1na91480.1100.1800No
104TRIP13na91710.1060.1796No
105SSRP1na92820.0910.1745No
106EEDna92930.0890.1746No
107NUP107na92970.0890.1750No
108NUP205na95290.0710.1634No
109MMS22Lna97130.0480.1541No
110PDS5Bna98100.0340.1493No
111RRM2na98390.0300.1480No
112POLD3na98520.0290.1476No
113TIPINna100590.0110.1369No
114NASPna100610.0110.1369No
115BRMS1Lna10170-0.0050.1312No
116USP1na10213-0.0090.1291No
117ORC6na10250-0.0160.1273No
118MCM6na10326-0.0260.1235No
119MELKna10765-0.0750.1010No
120SHMT1na10813-0.0790.0991No
121CDKN3na10895-0.0930.0955No
122CCNB2na11220-0.1260.0794No
123AURKAna11282-0.1340.0771No
124LUC7L3na11305-0.1370.0769No
125PMS2na11428-0.1500.0716No
126RAD51AP1na11430-0.1500.0726No
127NME1na12003-0.2170.0441No
128DEKna12009-0.2180.0454No
129EXOSC8na12137-0.2340.0403No
130XRCC6na12225-0.2490.0375No
131CDK4na12236-0.2510.0388No
132LBRna12297-0.2610.0375No
133PHF5Ana12400-0.2720.0341No
134NBNna12404-0.2720.0359No
135H2AFZna12572-0.2920.0291No
136TOP2Ana12732-0.3190.0231No
137XPO1na13014-0.3430.0107No
138BUB1Bna13024-0.3450.0127No
139DLGAP5na13044-0.3480.0142No
140SLBPna13063-0.3520.0157No
141MSH2na13118-0.3560.0154No
142RAD1na13176-0.3650.0150No
143NUDT21na13214-0.3730.0158No
144RNASEH2Ana13230-0.3750.0176No
145GSPT1na13252-0.3780.0192No
146CCP110na13280-0.3820.0205No
147HMMRna13307-0.3870.0219No
148PA2G4na13412-0.4050.0193No
149CTCFna13593-0.4230.0129No
150DCLRE1Bna13825-0.4620.0040No
151DEPDC1na13857-0.4680.0057No
152TMPOna13866-0.4690.0086No
153UBR7na13919-0.4740.0093No
154PAICSna14009-0.4900.0081No
155RAD51Cna14225-0.5090.0004No
156UBE2Tna14265-0.5150.0020No
157RANna14371-0.5320.0003No
158LYARna14656-0.582-0.0105No
159CKS1Bna14664-0.584-0.0067No
160SRSF2na14778-0.601-0.0084No
161CSE1Lna14801-0.604-0.0052No
162CDKN1Ana14882-0.616-0.0051No
163PCNAna14963-0.629-0.0048No
164POP7na14987-0.631-0.0015No
165MAD2L1na15013-0.6350.0017No
166RFC1na15216-0.672-0.0041No
167RAD21na15296-0.686-0.0034No
168NAA38na15366-0.699-0.0020No
169SMC3na15589-0.740-0.0084No
170CDKN1Bna15677-0.758-0.0076No
171ANP32Ena15680-0.758-0.0023No
172PRDX4na15690-0.7600.0026No
173RBBP7na15942-0.808-0.0048No
174CDK1na15956-0.8110.0003No
175SYNCRIPna16017-0.8240.0030No
176IPO7na16235-0.881-0.0022No
177RPA2na16249-0.8860.0035No
178EIF2S1na16348-0.9090.0048No
179NAP1L1na16373-0.9180.0101No
180CBX5na16382-0.9190.0162No
181KPNA2na16498-0.9470.0169No
182PTTG1na16987-1.085-0.0011No
183RPA3na17084-1.1100.0018No
184HUS1na17253-1.1620.0013No
185TP53na17262-1.1650.0091No
186DUTna17427-1.2260.0092No
187STMN1na17644-1.3110.0072No
188DCKna18375-1.733-0.0188No
189HNRNPDna18418-1.769-0.0084No
190SPC25na18500-1.8370.0004No
191CKS2na18969-2.501-0.0064No
192HMGB3na19000-2.5850.0104No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS