Datasetexpr.class.cls#HYDEGF_versus_CONTROL.class.cls#HYDEGF_versus_CONTROL_repos
Phenotypeclass.cls#HYDEGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_DNA_REPAIR
Enrichment Score (ES)-0.26052335
Normalized Enrichment Score (NES)-1.1936535
Nominal p-value0.10576923
FDR q-value0.16478382
FWER p-Value0.936
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_DNA_REPAIR   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DDB2na2662.4300.0073No
2RAD52na3532.3050.0230No
3DGCR8na4152.2170.0392No
4ERCC2na4552.1720.0562No
5ERCC3na5822.0350.0675No
6TAF6na8261.8040.0705No
7TARBP2na9961.6880.0765No
8ELLna12931.5170.0742No
9POLA2na13471.4950.0845No
10POLD1na13501.4930.0975No
11POLR2Ana19121.2890.0794No
12POLLna24951.1300.0588No
13LIG1na25351.1190.0665No
14SAC3D1na25641.1110.0748No
15TAF1Cna26111.1010.0820No
16POM121na26761.0860.0882No
17SURF1na27181.0750.0955No
18GTF3C5na27741.0580.1018No
19POLA1na27861.0550.1105No
20REV3Lna30131.0010.1074No
21SNAPC4na30220.9990.1158No
22ADCY6na30560.9900.1227No
23NT5Cna32130.9560.1229No
24ZWINTna32360.9540.1301No
25STX3na33860.9250.1304No
26SUPT5Hna35520.8930.1296No
27ZNF707na37230.8600.1282No
28POLR1Cna41990.7820.1101No
29CCNOna46150.7180.0946No
30NPR2na47490.6950.0938No
31GUK1na49870.6540.0871No
32CMPK2na53040.6040.0758No
33RFC2na55250.5730.0692No
34POLR2Ena56660.5510.0667No
35TYMSna57920.5330.0648No
36POLHna59800.5050.0595No
37RFC5na60990.4900.0576No
38VPS28na63060.4620.0508No
39POLR3Cna68070.3960.0280No
40PRIM1na68420.3910.0297No
41ITPAna69350.3810.0282No
42PNPna69680.3760.0298No
43HCLS1na69850.3730.0322No
44POLE4na72070.3420.0236No
45NFX1na72900.3310.0222No
46ADAna73610.3220.0214No
47GMPR2na74480.3120.0196No
48SRSF6na82210.220-0.0190No
49RAD51na82680.214-0.0195No
50ADRM1na84200.199-0.0257No
51UPF3Bna84690.192-0.0265No
52RFC3na85980.174-0.0317No
53NME4na86400.165-0.0324No
54FEN1na87230.161-0.0353No
55RAE1na88490.141-0.0406No
56XPCna89060.135-0.0424No
57SSRP1na92820.091-0.0613No
58GTF2H3na96320.057-0.0791No
59AK1na96680.052-0.0805No
60VPS37Dna97890.038-0.0864No
61POLD3na98520.029-0.0894No
62TAF13na10691-0.064-0.1328No
63ERCC1na10709-0.065-0.1332No
64UMPSna10737-0.071-0.1340No
65CANT1na10869-0.089-0.1400No
66POLR2Dna10986-0.104-0.1452No
67BCAMna11029-0.111-0.1465No
68POLR2Jna11066-0.116-0.1473No
69DGUOKna11466-0.157-0.1669No
70APRTna11564-0.170-0.1705No
71POLR3GLna11631-0.179-0.1724No
72VPS37Bna11723-0.190-0.1755No
73ERCC5na11786-0.201-0.1770No
74BOLA2na11886-0.214-0.1803No
75NME1na12003-0.217-0.1845No
76GTF2F1na12553-0.290-0.2107No
77TAF10na12617-0.301-0.2114No
78POLR2Hna12745-0.321-0.2152No
79CSTF3na12760-0.325-0.2131No
80SNAPC5na12811-0.331-0.2129No
81POLR1Dna13025-0.345-0.2210No
82NUDT21na13214-0.373-0.2276No
83GTF2H1na13241-0.376-0.2257No
84ARL6IP1na13554-0.421-0.2383No
85RFC4na13625-0.429-0.2383No
86TAF12na13644-0.433-0.2354No
87SEC61A1na13905-0.472-0.2449No
88IMPDH2na14016-0.491-0.2464No
89POLR2Cna14227-0.509-0.2529No
90TAF9na14283-0.516-0.2513No
91CLP1na14295-0.520-0.2473No
92GPX4na14401-0.538-0.2481No
93TSG101na14435-0.546-0.2451No
94DDB1na14506-0.558-0.2438No
95NME3na14825-0.608-0.2552Yes
96ZNRD1na14925-0.623-0.2549Yes
97MPGna14958-0.628-0.2511Yes
98PCNAna14963-0.629-0.2458Yes
99POLBna14985-0.630-0.2414Yes
100BCAP31na15001-0.633-0.2366Yes
101RALAna15016-0.636-0.2318Yes
102CDAna15208-0.671-0.2359Yes
103MRPL40na15341-0.694-0.2368Yes
104SMAD5na15614-0.745-0.2445Yes
105NUDT9na15648-0.753-0.2396Yes
106EDF1na15758-0.775-0.2386Yes
107SF3A3na15954-0.810-0.2417Yes
108RBX1na16070-0.838-0.2404Yes
109AAASna16210-0.873-0.2400Yes
110BRF2na16244-0.884-0.2340Yes
111RPA2na16249-0.886-0.2265Yes
112RNMTna16258-0.889-0.2191Yes
113USP11na16668-0.992-0.2319Yes
114NCBP2na17024-1.096-0.2409Yes
115POLR2Gna17026-1.097-0.2313Yes
116RRM2Bna17036-1.100-0.2221Yes
117RPA3na17084-1.110-0.2149Yes
118PDE4Bna17197-1.143-0.2107Yes
119TP53na17262-1.165-0.2039Yes
120ERCC8na17282-1.175-0.1946Yes
121GTF2H5na17336-1.195-0.1869Yes
122DUTna17427-1.226-0.1809Yes
123DCTN4na17454-1.238-0.1714Yes
124TK2na17656-1.316-0.1704Yes
125TMED2na17755-1.362-0.1636Yes
126GTF2A2na17802-1.387-0.1539Yes
127POLR2Ina17823-1.398-0.1427Yes
128CETN2na18125-1.564-0.1448Yes
129POLD4na18420-1.773-0.1446Yes
130HPRT1na18443-1.794-0.1301Yes
131EIF1Bna18458-1.806-0.1150Yes
132ERCC4na18478-1.824-0.1000Yes
133COX17na18505-1.841-0.0852Yes
134GTF2Bna18664-2.003-0.0760Yes
135AK3na18732-2.092-0.0611Yes
136SDCBPna18811-2.209-0.0459Yes
137SUPT4H1na18872-2.313-0.0288Yes
138POLR2Kna18999-2.578-0.0128Yes
139DAD1na19019-2.6420.0094Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_DNA_REPAIR   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_DNA_REPAIR: Random ES distribution   
Gene set null distribution of ES for HALLMARK_DNA_REPAIR