Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_P53_PATHWAY
Enrichment Score (ES)-0.30544576
Normalized Enrichment Score (NES)-1.4778296
Nominal p-value0.0030864198
FDR q-value0.021856036
FWER p-Value0.265
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_P53_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SLC3A2na1912.1220.0036No
2NUDT15na2502.0290.0136No
3RAD51Cna5101.7670.0113No
4DEF6na5611.7290.0198No
5LDHBna5981.7050.0288No
6SPHK1na6431.6740.0372No
7IRAK1na9851.5180.0291No
8HSPA4Lna11291.4680.0310No
9RCHY1na11851.4460.0373No
10STOMna12141.4360.0451No
11SLC19A2na13231.4050.0484No
12PVT1na13251.4050.0574No
13AENna14101.3730.0618No
14SESN1na14671.3570.0676No
15SLC7A11na14711.3560.0761No
16TPRKBna15341.3380.0814No
17NOL8na15381.3360.0898No
18PCNAna17121.2910.0890No
19VDRna17581.2780.0949No
20OSGIN1na18621.2540.0975No
21SFNna19001.2460.1036No
22PTPN14na19621.2320.1083No
23CCND3na22411.1690.1012No
24CCP110na22921.1590.1060No
25DDB2na24881.1130.1029No
26TAX1BP3na25081.1090.1090No
27EI24na25561.1000.1136No
28UPP1na25971.0950.1185No
29FBXW7na26871.0790.1207No
30PDGFAna29781.0300.1121No
31HMOX1na30111.0260.1170No
32SLC35D1na31151.0040.1180No
33POLHna32210.9820.1188No
34MDM2na33130.9680.1202No
35HBEGFna35930.9210.1115No
36TRAF4na38850.8700.1018No
37BLCAPna39040.8670.1064No
38RPL18na40320.8460.1052No
39HINT1na43020.8080.0962No
40PLK2na43440.8010.0992No
41TRIAP1na46220.7600.0895No
42ZMAT3na49160.7170.0787No
43GPX2na49290.7160.0827No
44IER5na49680.7120.0852No
45ABCC5na50230.7040.0869No
46RB1na51790.6810.0831No
47HDAC3na53940.6510.0761No
48HRASna56180.6230.0683No
49CDK5R1na57320.6050.0663No
50CDKN2AIPna58240.5940.0653No
51CCNKna59070.5820.0647No
52BAIAP2na60000.5700.0636No
53PRKAB1na60610.5630.0640No
54GADD45Ana61020.5550.0655No
55WWP1na62650.5320.0604No
56FASna62660.5320.0638No
57PROCRna63830.5160.0610No
58DNTTIP2na64190.5120.0624No
59TM7SF3na64790.5060.0626No
60ADAna65740.4930.0608No
61RAP2Bna66510.4850.0599No
62POM121na66560.4840.0628No
63SEC61A1na67340.4760.0618No
64DDIT3na67940.4690.0617No
65CGRRF1na70220.4440.0527No
66WRAP73na70790.4360.0525No
67RRP8na73310.4040.0419No
68ATF3na74100.3950.0403No
69F2Rna74300.3930.0419No
70EPHA2na74850.3870.0415No
71FDXRna77070.3620.0322No
72SDC1na79640.3300.0209No
73BAXna80920.3170.0162No
74PLK3na86450.255-0.0112No
75PPP1R15Ana87010.246-0.0125No
76APAF1na90580.207-0.0299No
77FOXO3na91060.201-0.0310No
78TNFSF9na91870.193-0.0340No
79EPS8L2na92380.189-0.0354No
80TPD52L1na94660.161-0.0463No
81MAPKAPK3na95830.147-0.0515No
82SP1na97170.135-0.0576No
83RPS27Lna101380.091-0.0791No
84DCXRna101510.088-0.0792No
85ACVR1Bna103120.067-0.0871No
86CASP1na103910.060-0.0909No
87KRT17na104210.060-0.0920No
88PPM1Dna105580.045-0.0989No
89ERCC5na105840.040-0.0999No
90CSRNP2na11009-0.004-0.1222No
91RAD9Ana11166-0.022-0.1302No
92RPS12na11442-0.055-0.1444No
93INHBBna11465-0.058-0.1451No
94TCHHna11472-0.059-0.1451No
95VWA5Ana11539-0.062-0.1481No
96BTG2na11938-0.118-0.1683No
97TGFAna12260-0.151-0.1842No
98HIST1H1Cna12346-0.161-0.1877No
99RETSATna12351-0.162-0.1868No
100ST14na12353-0.163-0.1858No
101JUNna12605-0.199-0.1978No
102IP6K2na12715-0.217-0.2021No
103BAK1na12720-0.218-0.2009No
104LIFna12907-0.232-0.2092No
105PMM1na12923-0.235-0.2085No
106RXRAna13249-0.281-0.2238No
107STEAP3na13310-0.289-0.2251No
108RAB40Cna13358-0.296-0.2256No
109NOTCH1na13411-0.304-0.2264No
110RGS16na13422-0.305-0.2250No
111H2AFJna13564-0.325-0.2303No
112IFI30na13832-0.356-0.2421No
113ISCUna13836-0.357-0.2399No
114TOB1na14149-0.399-0.2538No
115TP53na14267-0.417-0.2572No
116CCNG1na14380-0.429-0.2604No
117RNF19Bna14473-0.441-0.2624No
118PRMT2na14973-0.510-0.2853No
119RPL36na15275-0.559-0.2976No
120JAG2na15291-0.563-0.2948No
121MXD1na15373-0.577-0.2953No
122ANKRA2na15465-0.593-0.2963No
123KIF13Bna15539-0.601-0.2963No
124DGKAna15679-0.622-0.2996No
125CYFIP2na15765-0.639-0.3000No
126EPHX1na15777-0.644-0.2964No
127CDKN1Ana15950-0.678-0.3011Yes
128TRAFD1na15985-0.683-0.2985Yes
129IL1Ana16094-0.702-0.2997Yes
130PLXNB2na16127-0.711-0.2968Yes
131CD81na16248-0.744-0.2983Yes
132TRIB3na16278-0.753-0.2950Yes
133DRAM1na16350-0.769-0.2938Yes
134SOCS1na16397-0.781-0.2912Yes
135KLF4na16438-0.793-0.2882Yes
136ABHD4na16446-0.795-0.2835Yes
137NINJ1na16489-0.808-0.2805Yes
138SERTAD3na16496-0.810-0.2756Yes
139AK1na16503-0.811-0.2707Yes
140GM2Ana16868-0.911-0.2840Yes
141CTSDna16910-0.924-0.2803Yes
142HEXIM1na16968-0.940-0.2772Yes
143TM4SF1na17063-0.967-0.2759Yes
144FAM162Ana17146-0.993-0.2739Yes
145PERPna17157-0.998-0.2680Yes
146TCN2na17251-1.022-0.2663Yes
147ZFP36L1na17278-1.033-0.2611Yes
148CCND2na17385-1.070-0.2598Yes
149TAP1na17413-1.084-0.2542Yes
150RHBDF2na17423-1.090-0.2477Yes
151TP63na17462-1.110-0.2426Yes
152TGFB1na17599-1.148-0.2424Yes
153FOSna17698-1.185-0.2399Yes
154DDIT4na17752-1.202-0.2350Yes
155RRADna17756-1.204-0.2274Yes
156PTPREna17804-1.225-0.2220Yes
157CD82na17854-1.256-0.2165Yes
158PHLDA3na17894-1.271-0.2104Yes
159TSPYL2na17932-1.291-0.2041Yes
160S100A10na18028-1.345-0.2004Yes
161ITGB4na18146-1.397-0.1976Yes
162MXD4na18207-1.429-0.1916Yes
163MKNK2na18310-1.504-0.1873Yes
164PITPNC1na18321-1.507-0.1782Yes
165APPna18352-1.528-0.1699Yes
166XPCna18373-1.542-0.1611Yes
167RALGDSna18413-1.583-0.1530Yes
168NUPR1na18454-1.613-0.1447Yes
169TSC22D1na18536-1.680-0.1382Yes
170TXNIPna18572-1.710-0.1291Yes
171BTG1na18836-2.149-0.1291Yes
172FUCA1na18883-2.288-0.1168Yes
173ABATna18938-2.397-0.1043Yes
174VAMP8na19018-2.739-0.0909Yes
175CTSFna19041-2.834-0.0738Yes
176S100A4na19044-2.881-0.0554Yes
177NDRG1na19083-3.028-0.0380Yes
178BMP2na19119-3.339-0.0184Yes
179SAT1na19139-3.5060.0031Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_P53_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_P53_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_P53_PATHWAY