Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)-0.5156901
Normalized Enrichment Score (NES)-2.4871068
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_TNFA_SIGNALING_VIA_NFKB   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FJX1na472.6880.0123No
2EDN1na772.4660.0244No
3IL18na1522.2020.0326No
4MAP2K3na2821.9780.0367No
5PLAUna3871.8540.0415No
6F3na5451.7420.0428No
7SPHK1na6431.6740.0469No
8DNAJB4na8091.5870.0470No
9GADD45Bna12831.4170.0299No
10YRDCna15201.3400.0249No
11IL7Rna16961.2950.0228No
12BIRC2na17111.2910.0292No
13ETS2na18291.2610.0300No
14SERPINB2na20531.2070.0249No
15PTGER4na21101.1940.0285No
16PMEPA1na21741.1840.0317No
17RCAN1na22911.1590.0320No
18ATP2B1na23611.1420.0347No
19CCND1na24001.1330.0389No
20HBEGFna35930.921-0.0187No
21MYCna39070.866-0.0304No
22CD44na39540.860-0.0281No
23BTG3na39850.853-0.0249No
24PLK2na43440.801-0.0394No
25IER5na49680.712-0.0682No
26FOSBna52090.678-0.0771No
27NFAT5na55390.633-0.0909No
28FOSL1na57130.607-0.0966No
29GADD45Ana61020.555-0.1140No
30GCH1na68810.459-0.1524No
31EHD1na69900.448-0.1556No
32TNFAIP8na70990.433-0.1589No
33ATF3na74100.395-0.1730No
34PDLIM5na74570.391-0.1733No
35FUT4na76830.365-0.1831No
36CD83na77560.356-0.1849No
37IFIT2na85450.266-0.2249No
38TIPARPna86760.250-0.2303No
39PPP1R15Ana87010.246-0.2302No
40TUBB2Ana88310.234-0.2357No
41TNIP2na90750.205-0.2474No
42IRS2na91010.201-0.2476No
43TNFSF9na91870.193-0.2510No
44INHBAna101500.088-0.3011No
45NR4A3na101790.084-0.3021No
46DENND5Ana102680.073-0.3063No
47ZBTB10na11051-0.010-0.3474No
48NFKB1na11078-0.014-0.3486No
49EIF1na11186-0.025-0.3541No
50HES1na11615-0.072-0.3762No
51IL6STna11649-0.077-0.3775No
52BTG2na11938-0.118-0.3920No
53ID2na11940-0.118-0.3914No
54CLCF1na12277-0.152-0.4083No
55NFE2L2na12430-0.175-0.4153No
56G0S2na12437-0.176-0.4146No
57MCL1na12451-0.179-0.4143No
58JUNna12605-0.199-0.4213No
59LIFna12907-0.232-0.4358No
60F2RL1na13357-0.296-0.4578No
61RELna13430-0.305-0.4599No
62CCNL1na13683-0.343-0.4713No
63TRIP10na13701-0.345-0.4703No
64CXCL10na13845-0.359-0.4758No
65PTX3na13978-0.374-0.4807No
66IL15RAna14050-0.385-0.4823No
67LITAFna14053-0.386-0.4803No
68KLF6na14086-0.390-0.4798No
69TANKna14216-0.408-0.4844No
70RNF19Bna14473-0.441-0.4954No
71SGK1na14627-0.466-0.5009No
72DUSP1na14724-0.484-0.5033No
73RELAna14752-0.488-0.5020No
74GEMna14920-0.503-0.5080No
75KLF2na14929-0.504-0.5056No
76SLC2A6na15085-0.526-0.5109No
77TLR2na15128-0.535-0.5102No
78EGR2na15131-0.536-0.5073No
79LAMB3na15267-0.557-0.5113No
80CCL2na15276-0.560-0.5087No
81RIPK2na15343-0.573-0.5090No
82MXD1na15373-0.577-0.5073No
83NR4A1na15488-0.595-0.5101No
84JAG1na15596-0.604-0.5124Yes
85SIK1na15609-0.607-0.5097Yes
86PLAURna15641-0.614-0.5079Yes
87PER1na15649-0.615-0.5049Yes
88PHLDA1na15776-0.644-0.5080Yes
89IFIH1na15792-0.647-0.5052Yes
90SMAD3na15810-0.650-0.5025Yes
91TNFna15826-0.653-0.4997Yes
92CEBPBna15897-0.665-0.4997Yes
93CDKN1Ana15950-0.678-0.4987Yes
94SOCS3na16002-0.686-0.4976Yes
95IL1Ana16094-0.702-0.4985Yes
96CCRL2na16115-0.706-0.4957Yes
97FOSL2na16125-0.710-0.4923Yes
98NFKBIEna16129-0.711-0.4885Yes
99IER2na16166-0.724-0.4864Yes
100DDX58na16198-0.731-0.4840Yes
101PHLDA2na16201-0.731-0.4801Yes
102KLF10na16235-0.741-0.4778Yes
103DRAM1na16350-0.769-0.4795Yes
104PANX1na16359-0.771-0.4757Yes
105RHOBna16399-0.781-0.4735Yes
106KLF4na16438-0.793-0.4711Yes
107NINJ1na16489-0.808-0.4693Yes
108TNCna16616-0.837-0.4713Yes
109SNNna16639-0.843-0.4678Yes
110SQSTM1na16663-0.848-0.4643Yes
111MAFFna16697-0.856-0.4614Yes
112EGR3na16779-0.878-0.4608Yes
113SERPINB8na16830-0.899-0.4585Yes
114MAP3K8na16847-0.904-0.4543Yes
115NFKB2na16862-0.909-0.4501Yes
116DUSP5na16942-0.934-0.4491Yes
117ICOSLGna17131-0.989-0.4535Yes
118CEBPDna17150-0.995-0.4490Yes
119SPSB1na17236-1.017-0.4479Yes
120CXCL1na17379-1.069-0.4494Yes
121TAP1na17413-1.084-0.4452Yes
122NFKBIAna17437-1.096-0.4404Yes
123CXCL3na17464-1.110-0.4356Yes
124TNFAIP3na17494-1.121-0.4310Yes
125JUNBna17499-1.123-0.4250Yes
126CXCL2na17501-1.124-0.4189Yes
127RELBna17504-1.124-0.4128Yes
128TNIP1na17556-1.134-0.4092Yes
129CSF2na17557-1.135-0.4030Yes
130STAT5Ana17598-1.148-0.3988Yes
131B4GALT1na17619-1.157-0.3935Yes
132FOSna17698-1.185-0.3910Yes
133SDC4na17717-1.190-0.3854Yes
134LDLRna17723-1.192-0.3791Yes
135EFNA1na17738-1.198-0.3733Yes
136PTPREna17804-1.225-0.3699Yes
137MARCKSna17808-1.228-0.3633Yes
138B4GALT5na17866-1.259-0.3594Yes
139ZC3H12Ana17934-1.292-0.3558Yes
140ICAM1na17954-1.306-0.3496Yes
141IRF1na18023-1.342-0.3458Yes
142PFKFB3na18027-1.345-0.3386Yes
143IL23Ana18033-1.345-0.3314Yes
144EGR1na18053-1.352-0.3250Yes
145BCL3na18068-1.364-0.3182Yes
146ZFP36na18138-1.393-0.3142Yes
147KDM6Bna18155-1.402-0.3073Yes
148IL1Bna18217-1.433-0.3026Yes
149NFIL3na18225-1.442-0.2950Yes
150TRIB1na18278-1.478-0.2896Yes
151PDE4Bna18287-1.482-0.2819Yes
152GFPT2na18347-1.525-0.2766Yes
153TGIF1na18371-1.541-0.2693Yes
154BHLHE40na18387-1.556-0.2616Yes
155CFLARna18417-1.589-0.2543Yes
156IFNGR2na18421-1.594-0.2457Yes
157NAMPTna18422-1.594-0.2369Yes
158TRAF1na18477-1.625-0.2308Yes
159NR4A2na18503-1.645-0.2231Yes
160PNRC1na18528-1.672-0.2152Yes
161TSC22D1na18536-1.680-0.2063Yes
162CCL20na18550-1.693-0.1976Yes
163BCL6na18551-1.694-0.1883Yes
164DUSP4na18589-1.738-0.1807Yes
165PTGS2na18633-1.789-0.1731Yes
166IL6na18776-2.020-0.1694Yes
167BTG1na18836-2.149-0.1607Yes
168SOD2na18970-2.521-0.1538Yes
169AREGna18983-2.586-0.1402Yes
170ABCA1na18984-2.587-0.1260Yes
171KLF9na19024-2.760-0.1128Yes
172SLC2A3na19034-2.803-0.0979Yes
173BIRC3na19043-2.872-0.0825Yes
174TNFRSF9na19048-2.893-0.0668Yes
175CXCL11na19118-3.311-0.0522Yes
176BMP2na19119-3.339-0.0338Yes
177KYNUna19126-3.367-0.0156Yes
178SAT1na19139-3.5060.0031Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_TNFA_SIGNALING_VIA_NFKB   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_TNFA_SIGNALING_VIA_NFKB: Random ES distribution   
Gene set null distribution of ES for HALLMARK_TNFA_SIGNALING_VIA_NFKB