Datasetexpr.class.cls#HYDEGF_versus_CONTROL.class.cls#HYDEGF_versus_CONTROL_repos
Phenotypeclass.cls#HYDEGF_versus_CONTROL_repos
Upregulated in classHYDEGF
GeneSetHALLMARK_TGF_BETA_SIGNALING
Enrichment Score (ES)0.31131324
Normalized Enrichment Score (NES)1.1429682
Nominal p-value0.25649914
FDR q-value0.36607775
FWER p-Value0.999
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_TGF_BETA_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NOGna3142.3570.0322Yes
2ENGna4012.2310.0737Yes
3SMAD6na4912.1360.1130Yes
4SMAD7na6062.0060.1484Yes
5PPP1R15Ana10511.6530.1593Yes
6ID3na11781.5820.1853Yes
7ID2na13771.4790.2054Yes
8SKIna15011.4330.2285Yes
9SMURF1na15251.4200.2566Yes
10SMURF2na16211.3850.2801Yes
11PMEPA1na19641.2770.2886Yes
12HIPK2na20271.2600.3113Yes
13BCAR3na35870.8860.2482No
14NCOR2na38910.8310.2495No
15SMAD3na60560.4960.1467No
16SLC20A1na62500.4690.1463No
17CDK9na63560.4570.1502No
18APCna64020.4500.1571No
19ID1na68330.3930.1427No
20ARID4Bna71690.3490.1324No
21FURINna75550.2980.1185No
22TJP1na83110.2080.0833No
23LTBP2na90800.1170.0457No
24ACVR1na91420.1100.0447No
25TRIM33na92240.1000.0426No
26SKILna97380.0450.0167No
27BMPR1Ana10633-0.057-0.0288No
28FNTAna11046-0.113-0.0480No
29SMAD1na11595-0.174-0.0730No
30PPP1CAna12980-0.337-0.1384No
31TGIF1na13124-0.357-0.1385No
32PPM1Ana13547-0.420-0.1519No
33CDKN1Cna13565-0.423-0.1440No
34CDH1na13575-0.423-0.1358No
35TGFB1na14260-0.515-0.1609No
36JUNBna15969-0.814-0.2333No
37MAP3K7na16187-0.867-0.2268No
38BMPR2na16383-0.919-0.2180No
39UBE2D3na16494-0.946-0.2043No
40TGFBR1na16855-1.043-0.2016No
41KLF10na16932-1.064-0.1836No
42HDAC1na17151-1.128-0.1718No
43WWTR1na17497-1.258-0.1639No
44FKBP1Ana17786-1.373-0.1506No
45CTNNB1na17952-1.465-0.1291No
46RHOAna17958-1.466-0.0991No
47XIAPna18281-1.662-0.0817No
48IFNGR2na18361-1.722-0.0503No
49BMP2na18629-1.962-0.0238No
50RAB31na19005-2.5970.0101No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_TGF_BETA_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_TGF_BETA_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_TGF_BETA_SIGNALING