Datasetexpr.class.cls#HYDEGF_versus_CONTROL.class.cls#HYDEGF_versus_CONTROL_repos
Phenotypeclass.cls#HYDEGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_P53_PATHWAY
Enrichment Score (ES)-0.2780078
Normalized Enrichment Score (NES)-1.3247736
Nominal p-value0.027848102
FDR q-value0.06641673
FWER p-Value0.642
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_P53_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PVT1na163.6550.0219No
2DEF6na1122.8650.0348No
3DDB2na2662.4300.0419No
4SLC3A2na4612.1660.0451No
5ATF3na4732.1540.0580No
6IRAK1na5032.1150.0696No
7FBXW7na6721.9260.0728No
8TNFSF9na7381.8750.0811No
9PDGFAna8131.8110.0884No
10UPP1na8141.8110.0997No
11TRAF4na9651.7100.1025No
12SESN1na9671.7090.1131No
13PPP1R15Ana10511.6530.1190No
14WRAP73na11431.6040.1242No
15IER5na12761.5230.1268No
16BAIAP2na13941.4700.1298No
17ABCC5na14011.4670.1386No
18AENna16681.3670.1331No
19RAD9Ana18231.3180.1332No
20HRASna20331.2570.1301No
21TCHHna21791.2170.1300No
22FOSna22151.2070.1357No
23PLK2na22451.1970.1416No
24PLK3na23921.1530.1411No
25POM121na26761.0860.1330No
26DDIT3na27481.0660.1359No
27GADD45Ana27981.0520.1399No
28EPHA2na28601.0380.1432No
29DGKAna28901.0300.1481No
30EPS8L2na29541.0160.1511No
31JAG2na32630.9490.1408No
32TSPYL2na33700.9280.1410No
33BAXna37460.8560.1266No
34OSGIN1na39130.8280.1230No
35VDRna42140.7790.1121No
36PTPN14na42660.7710.1142No
37RAB40Cna42790.7700.1184No
38NOTCH1na42840.7690.1230No
39FDXRna48680.6740.0965No
40PLXNB2na48930.6690.0994No
41HEXIM1na50500.6450.0953No
42LIFna51470.6290.0941No
43RXRAna52680.6110.0916No
44TRIB3na54080.5900.0880No
45HSPA4Lna55210.5730.0857No
46IFI30na55540.5700.0875No
47JUNna56420.5550.0864No
48HDAC3na57860.5340.0822No
49GPX2na58050.5320.0846No
50POLHna59800.5050.0786No
51SPHK1na61820.4780.0710No
52PPM1Dna62190.4740.0721No
53KRT17na63320.4590.0690No
54NUPR1na64040.4490.0681No
55FOXO3na65800.4270.0616No
56NOL8na67700.3990.0541No
57CGRRF1na70240.3700.0431No
58CDK5R1na71580.3500.0383No
59ST14na71790.3470.0394No
60CYFIP2na71820.3470.0415No
61ADAna73610.3220.0341No
62SLC35D1na74170.3140.0332No
63KLF4na79140.2540.0087No
64BLCAPna80350.2390.0039No
65STEAP3na84750.192-0.0180No
66INHBBna86180.169-0.0244No
67SLC7A11na86380.165-0.0244No
68IP6K2na87100.162-0.0271No
69CCND3na88640.140-0.0343No
70XPCna89060.135-0.0356No
71RALGDSna89520.126-0.0372No
72RRP8na89530.126-0.0364No
73SFNna90710.119-0.0418No
74NUDT15na90730.118-0.0411No
75PRKAB1na93370.084-0.0545No
76ANKRA2na95980.062-0.0677No
77AK1na96680.052-0.0710No
78MAPKAPK3na96730.052-0.0709No
79CDKN2AIPna97120.048-0.0726No
80SLC19A2na100720.009-0.0914No
81HBEGFna10340-0.028-0.1053No
82TPD52L1na10368-0.032-0.1065No
83HMOX1na10412-0.037-0.1086No
84WWP1na10566-0.046-0.1163No
85CSRNP2na10614-0.053-0.1185No
86PHLDA3na10695-0.064-0.1223No
87PMM1na10773-0.076-0.1258No
88EI24na11069-0.116-0.1406No
89ITGB4na11077-0.118-0.1403No
90STOMna11213-0.124-0.1466No
91DNTTIP2na11215-0.125-0.1459No
92RGS16na11341-0.139-0.1516No
93ERCC5na11786-0.201-0.1737No
94PRMT2na11822-0.208-0.1742No
95CD81na11825-0.208-0.1730No
96MKNK2na12029-0.222-0.1823No
97RNF19Bna12235-0.251-0.1915No
98PROCRna12401-0.272-0.1985No
99CASP1na12497-0.286-0.2017No
100KIF13Bna12501-0.287-0.2001No
101MDM2na12590-0.296-0.2029No
102RETSATna12706-0.315-0.2070No
103BAK1na12757-0.324-0.2076No
104CCNKna12768-0.326-0.2061No
105DCXRna12972-0.336-0.2146No
106RAP2Bna13225-0.374-0.2256No
107CCP110na13280-0.382-0.2260No
108SDC1na13322-0.390-0.2257No
109TRIAP1na13427-0.407-0.2287No
110NINJ1na13435-0.408-0.2265No
111MXD1na13508-0.414-0.2277No
112ISCUna13541-0.419-0.2268No
113RHBDF2na13619-0.428-0.2282No
114RRADna13718-0.444-0.2306No
115MXD4na13783-0.455-0.2311No
116FASna13787-0.456-0.2284No
117TAX1BP3na13833-0.463-0.2279No
118TCN2na13902-0.472-0.2285No
119SEC61A1na13905-0.472-0.2257No
120BTG2na14115-0.493-0.2336No
121RAD51Cna14225-0.509-0.2362No
122TGFB1na14260-0.515-0.2348No
123ZMAT3na14465-0.551-0.2421No
124CCND2na14645-0.580-0.2479No
125PTPREna14865-0.614-0.2555No
126CDKN1Ana14882-0.616-0.2526No
127PCNAna14963-0.629-0.2528No
128SP1na15137-0.660-0.2578No
129RB1na15219-0.672-0.2579No
130LDHBna15225-0.674-0.2540No
131EPHX1na15301-0.687-0.2536No
132APAF1na15368-0.700-0.2527No
133RCHY1na15440-0.709-0.2521No
134H2AFJna15502-0.722-0.2508No
135CTSDna15631-0.749-0.2528No
136ACVR1Bna16066-0.837-0.2704No
137DDIT4na16203-0.871-0.2722No
138IL1Ana16315-0.902-0.2724Yes
139TPRKBna16375-0.918-0.2698Yes
140ZFP36L1na16467-0.939-0.2687Yes
141GM2Ana16579-0.964-0.2685Yes
142HINT1na16616-0.975-0.2644Yes
143RPL36na16730-1.006-0.2640Yes
144RPL18na16788-1.023-0.2607Yes
145F2Rna16819-1.032-0.2558Yes
146TSC22D1na16950-1.072-0.2560Yes
147TRAFD1na16979-1.082-0.2507Yes
148TAP1na16995-1.089-0.2447Yes
149TP63na17056-1.103-0.2410Yes
150ABHD4na17099-1.112-0.2363Yes
151TP53na17262-1.165-0.2375Yes
152FUCA1na17274-1.170-0.2308Yes
153TM7SF3na17290-1.178-0.2243Yes
154TGFAna17302-1.182-0.2175Yes
155PITPNC1na17399-1.213-0.2150Yes
156HIST1H1Cna17421-1.223-0.2085Yes
157SOCS1na17552-1.279-0.2074Yes
158DRAM1na17740-1.352-0.2088Yes
159BTG1na17748-1.358-0.2007Yes
160CTSFna17752-1.360-0.1924Yes
161CD82na17789-1.376-0.1857Yes
162CCNG1na17820-1.396-0.1786Yes
163SERTAD3na18045-1.509-0.1809Yes
164TOB1na18307-1.689-0.1841Yes
165RPS12na18376-1.733-0.1769Yes
166BMP2na18629-1.962-0.1780Yes
167S100A10na18646-1.987-0.1664Yes
168APPna18704-2.052-0.1566Yes
169FAM162Ana18708-2.062-0.1439Yes
170ABATna18799-2.192-0.1350Yes
171S100A4na18812-2.210-0.1219Yes
172NDRG1na18853-2.277-0.1098Yes
173PERPna18938-2.423-0.0991Yes
174TM4SF1na18955-2.472-0.0846Yes
175TXNIPna18972-2.510-0.0698Yes
176RPS27Lna19061-2.776-0.0571Yes
177SAT1na19134-3.131-0.0414Yes
178VAMP8na19170-3.509-0.0214Yes
179VWA5Ana19175-3.6650.0012Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_P53_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_P53_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_P53_PATHWAY