Datasetexpr.class.cls#HYD_versus_CONTROL.class.cls#HYD_versus_CONTROL_repos
Phenotypeclass.cls#HYD_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_APOPTOSIS
Enrichment Score (ES)-0.34034836
Normalized Enrichment Score (NES)-1.5753969
Nominal p-value0.0
FDR q-value0.012245985
FWER p-Value0.066
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_APOPTOSIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CREBBPna9671.896-0.0313No
2LEF1na14171.622-0.0382No
3SMAD7na14871.581-0.0256No
4RHOT2na15031.574-0.0102No
5GADD45Bna19721.375-0.0207No
6ERBB2na19771.374-0.0068No
7JUNna19921.3660.0065No
8DDIT3na23461.2250.0006No
9GADD45Ana24241.2000.0089No
10MADDna25191.1670.0159No
11SPTAN1na25251.1640.0276No
12ATF3na25831.1500.0364No
13PPP2R5Bna30341.0280.0233No
14CDC25Bna31530.9990.0274No
15ERBB3na33350.9570.0277No
16FDXRna36320.8860.0213No
17DIABLOna36430.8830.0298No
18TNFRSF12Ana36450.8830.0388No
19PSEN2na38770.8380.0353No
20WEE1na46030.6920.0044No
21BMP2na48910.643-0.0041No
22BAXna49240.6380.0008No
23CFLARna49650.6330.0052No
24H1F0na52470.593-0.0035No
25PLCB2na55760.541-0.0151No
26IRF1na56480.533-0.0134No
27EGR3na60130.483-0.0275No
28CDKN1Bna60430.481-0.0241No
29GCH1na61570.463-0.0253No
30CASP9na63330.439-0.0300No
31BMFna64190.427-0.0300No
32NEFHna69970.360-0.0566No
33SQSTM1na70120.359-0.0537No
34IL18na70270.356-0.0507No
35EBPna70380.355-0.0476No
36IL6na72440.333-0.0550No
37TNFna72580.331-0.0523No
38CCND1na74940.308-0.0614No
39TGFBR3na76150.290-0.0647No
40HMGB2na76600.284-0.0641No
41BTG2na77020.284-0.0634No
42MCL1na77290.284-0.0618No
43DFFAna77610.279-0.0606No
44RARAna82440.227-0.0835No
45BIKna82970.220-0.0840No
46CASP2na87790.169-0.1075No
47ROCK1na90750.144-0.1215No
48IL1Bna91360.136-0.1233No
49RHOBna92500.124-0.1279No
50DAP3na92590.122-0.1271No
51ANKHna94430.098-0.1357No
52CCND2na96090.088-0.1434No
53IL1Ana96510.080-0.1448No
54PDGFRBna99220.051-0.1584No
55IGF2Rna100250.038-0.1634No
56PEA15na101420.023-0.1692No
57TIMP2na101780.018-0.1709No
58CASP1na103020.015-0.1772No
59PTK2na103910.008-0.1817No
60RETSATna104200.005-0.1831No
61CCNA1na10576-0.014-0.1911No
62DPYDna10582-0.014-0.1912No
63SLC20A1na10603-0.017-0.1921No
64TAP1na10646-0.022-0.1941No
65ADD1na10759-0.033-0.1996No
66CTHna10798-0.037-0.2012No
67BCL2L2na10801-0.037-0.2010No
68CASP8na10884-0.051-0.2048No
69GNA15na10989-0.064-0.2096No
70ENO2na11078-0.075-0.2134No
71CD44na11081-0.075-0.2127No
72CD14na11546-0.118-0.2359No
73CDKN1Ana11746-0.145-0.2448No
74NEDD9na12213-0.201-0.2672No
75BRCA1na12249-0.206-0.2669No
76FEZ1na12281-0.210-0.2664No
77TSPOna12292-0.212-0.2648No
78FASna12828-0.261-0.2901No
79BCAP31na12908-0.272-0.2915No
80RELAna13082-0.296-0.2975No
81TIMP3na13429-0.342-0.3122No
82SAT1na13558-0.362-0.3152No
83SOD2na13651-0.378-0.3161No
84ISG20na13723-0.391-0.3158No
85APPna13765-0.397-0.3139No
86IGFBP6na13803-0.403-0.3117No
87PLATna13867-0.414-0.3108No
88CYLDna14028-0.420-0.3148No
89GPX4na14284-0.460-0.3235No
90PSEN1na14410-0.478-0.3252No
91BCL2L11na14467-0.486-0.3231No
92TGFB2na14509-0.492-0.3202No
93CLUna14511-0.492-0.3152No
94TIMP1na14560-0.499-0.3126No
95SATB1na14770-0.532-0.3181No
96GPX3na14790-0.536-0.3136No
97BCL2L1na14898-0.549-0.3136No
98GPX1na15409-0.635-0.3338Yes
99HMOX1na15431-0.638-0.3284Yes
100BIDna15537-0.659-0.3271Yes
101GSRna15538-0.659-0.3204Yes
102GSNna15576-0.665-0.3155Yes
103ETF1na15634-0.675-0.3115Yes
104HSPB1na15951-0.733-0.3206Yes
105TOP2Ana15987-0.741-0.3148Yes
106IFITM3na15996-0.744-0.3076Yes
107KRT18na16203-0.788-0.3103Yes
108CASP4na16359-0.824-0.3100Yes
109CAV1na16368-0.825-0.3020Yes
110RNASELna16540-0.865-0.3021Yes
111TNFSF10na16587-0.869-0.2955Yes
112PMAIP1na16591-0.869-0.2868Yes
113XIAPna16662-0.889-0.2813Yes
114BCL10na16727-0.907-0.2754Yes
115DAPna16811-0.929-0.2702Yes
116CTNNB1na16890-0.952-0.2645Yes
117ANXA1na16924-0.963-0.2564Yes
118BTG3na16989-0.983-0.2496Yes
119EREGna17124-1.024-0.2462Yes
120CDK2na17319-1.090-0.2452Yes
121DNM1Lna17464-1.139-0.2410Yes
122BIRC3na17468-1.140-0.2295Yes
123TXNIPna17600-1.197-0.2241Yes
124VDAC2na17787-1.281-0.2207Yes
125PAK1na17820-1.295-0.2091Yes
126PPP3R1na17995-1.378-0.2040Yes
127CASP7na18210-1.506-0.1998Yes
128F2Rna18280-1.550-0.1875Yes
129IFNGR1na18491-1.701-0.1811Yes
130CASP6na18493-1.701-0.1637Yes
131PDCD4na18523-1.724-0.1475Yes
132PPT1na18555-1.749-0.1312Yes
133DNAJA1na18581-1.765-0.1144Yes
134GSTM1na18616-1.803-0.0977Yes
135CASP3na18683-1.879-0.0818Yes
136BNIP3Lna18688-1.884-0.0627Yes
137EMP1na18689-1.884-0.0434Yes
138SOD1na18799-2.015-0.0284Yes
139DNAJC3na18949-2.261-0.0130Yes
140LGALS3na19056-2.5360.0075Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_APOPTOSIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_APOPTOSIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_APOPTOSIS