Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classEGF
GeneSetHALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY
Enrichment Score (ES)0.3110383
Normalized Enrichment Score (NES)1.1129789
Nominal p-value0.2818792
FDR q-value0.34386906
FWER p-Value0.999
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HHEXna1392.2230.0501Yes
2NQO1na1412.2230.1074Yes
3ERCC2na6511.6700.1240Yes
4MGST1na10501.4940.1417Yes
5GCLMna11091.4750.1768Yes
6TXNRD2na12511.4270.2063Yes
7PRDX1na14521.3630.2310Yes
8GLRX2na15821.3240.2584Yes
9TXNna22341.1720.2547Yes
10LSP1na23891.1340.2759Yes
11TXNRD1na28561.0510.2787Yes
12HMOX2na30151.0250.2969Yes
13OXSR1na36140.9180.2894Yes
14SCAF4na36520.9130.3110Yes
15PRNPna49770.7110.2603No
16PRDX4na62140.5380.2096No
17GCLCna67720.4720.1927No
18SOD1na79450.3320.1401No
19PRDX6na84800.2740.1193No
20EGLN2na93240.1800.0800No
21MSRAna94050.1710.0802No
22FTLna12549-0.190-0.0790No
23FESna12587-0.197-0.0758No
24G6PDna13071-0.252-0.0945No
25SRXN1na13814-0.351-0.1242No
26NDUFS2na13895-0.365-0.1190No
27CDKN2Dna14162-0.400-0.1226No
28ABCC1na14177-0.402-0.1129No
29GSRna14564-0.456-0.1213No
30NDUFA6na14794-0.496-0.1204No
31ATOX1na15487-0.595-0.1412No
32PFKPna15615-0.609-0.1321No
33CATna15662-0.617-0.1186No
34PDLIM1na15891-0.664-0.1133No
35STK25na15908-0.667-0.0970No
36MBPna15934-0.673-0.0809No
37GPX3na16209-0.732-0.0763No
38PRDX2na16340-0.766-0.0633No
39GPX4na16614-0.837-0.0560No
40SBNO2na16620-0.839-0.0346No
41JUNBna17499-1.123-0.0514No
42GLRXna18169-1.407-0.0500No
43NDUFB4na18299-1.495-0.0182No
44SOD2na18970-2.5210.0119No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY