Datasetexpr.class.cls#HYD_versus_CONTROL.class.cls#HYD_versus_CONTROL_repos
Phenotypeclass.cls#HYD_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)-0.29113778
Normalized Enrichment Score (NES)-1.3236384
Nominal p-value0.024193548
FDR q-value0.068591915
FWER p-Value0.427
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_ALLOGRAFT_REJECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IGSF6na3022.6680.0186No
2PRKCGna3722.5340.0476No
3PTPN6na5442.2880.0682No
4TRAF2na7292.0910.0855No
5IL11na9461.9120.0988No
6AKT1na12971.6910.1023No
7IKBKBna16051.5280.1059No
8ITGB2na24831.1790.0752No
9HLA-DOBna25111.1680.0888No
10IRF7na30031.0360.0764No
11IL27RAna46300.6890.0001No
12ICOSLGna47830.6620.0007No
13LIFna50940.614-0.0076No
14CSKna52680.590-0.0091No
15EGFRna55000.552-0.0141No
16CD8Ana56330.534-0.0141No
17TLR6na57430.520-0.0131No
18INHBBna65680.407-0.0511No
19NLRP3na67560.386-0.0559No
20IL18na70270.356-0.0654No
21IL6na72440.333-0.0725No
22TNFna72580.331-0.0689No
23LTBna73570.318-0.0699No
24JAK2na75610.298-0.0767No
25EIF3Ana77310.284-0.0819No
26HLA-Gna77710.277-0.0804No
27HLA-DQA1na82290.229-0.1014No
28IL7na83030.219-0.1024No
29PSMB10na83090.219-0.0998No
30IL12Ana84490.206-0.1044No
31RPS9na88180.164-0.1216No
32ACVR2Ana88500.159-0.1212No
33EIF4G3na91200.137-0.1335No
34IL1Bna91360.136-0.1325No
35IL4Rna91380.135-0.1309No
36HLA-DMBna92530.123-0.1352No
37SOCS1na93240.113-0.1374No
38CCND2na96090.088-0.1512No
39EIF3Dna96540.079-0.1525No
40AARSna97920.065-0.1588No
41C2na98290.060-0.1599No
42TGFB1na99370.048-0.1649No
43ICAM1na99490.046-0.1649No
44DYRK3na101240.025-0.1737No
45BCL3na10566-0.012-0.1966No
46TAP1na10646-0.022-0.2005No
47ELF4na11360-0.098-0.2366No
48HLA-DMAna11401-0.101-0.2374No
49CCND3na11490-0.109-0.2406No
50NME1na11542-0.117-0.2418No
51TAPBPna11603-0.126-0.2433No
52CTSSna11932-0.167-0.2583No
53HLA-Ena12076-0.183-0.2634No
54BRCA1na12249-0.206-0.2698No
55ETS1na12310-0.215-0.2702No
56CCL2na12375-0.222-0.2707No
57HLA-DOAna12515-0.226-0.2750No
58IFNAR2na12530-0.229-0.2728No
59TLR1na12783-0.255-0.2827No
60TLR3na12803-0.258-0.2804No
61FASna12828-0.261-0.2783No
62TLR2na12836-0.262-0.2753No
63HDAC9na12887-0.270-0.2744No
64CD74na12971-0.280-0.2751No
65LY75na13081-0.296-0.2770No
66RPS19na13137-0.305-0.2760No
67APBB1na13265-0.318-0.2785No
68MTIF2na13297-0.325-0.2760No
69CD40na13309-0.327-0.2723No
70INHBAna13523-0.357-0.2789No
71ACHEna13587-0.367-0.2775No
72LYNna13668-0.380-0.2768No
73CFPna13712-0.387-0.2740No
74RARSna13794-0.402-0.2731No
75UBE2Nna14014-0.419-0.2792No
76ABCE1na14186-0.439-0.2825No
77HLA-DRAna14240-0.450-0.2794No
78GBP2na14345-0.470-0.2788No
79TAP2na14396-0.476-0.2753No
80ABI1na14438-0.481-0.2713No
81TGFB2na14509-0.492-0.2686No
82TIMP1na14560-0.499-0.2648No
83MRPL3na14592-0.504-0.2599No
84BCAT1na15072-0.574-0.2776No
85IL15na15098-0.579-0.2714No
86CRTAMna15475-0.645-0.2828Yes
87CAPGna15558-0.662-0.2786Yes
88MAP3K7na15614-0.671-0.2728Yes
89IFNGR2na15618-0.672-0.2643Yes
90SOCS5na15777-0.698-0.2636Yes
91GCNT1na15821-0.708-0.2567Yes
92DARSna15889-0.721-0.2509Yes
93EIF5Ana16278-0.806-0.2609Yes
94ST8SIA4na16410-0.834-0.2570Yes
95WARSna16504-0.855-0.2508Yes
96GLMNna16516-0.858-0.2403Yes
97HCLS1na16552-0.866-0.2310Yes
98RIPK2na16616-0.878-0.2230Yes
99BCL10na16727-0.907-0.2170Yes
100STAT1na16812-0.929-0.2095Yes
101EREGna17124-1.024-0.2126Yes
102EIF3Jna17206-1.053-0.2032Yes
103RPL39na17486-1.149-0.2030Yes
104TPD52na17682-1.234-0.1973Yes
105RPL9na17783-1.280-0.1861Yes
106GALNT1na18057-1.420-0.1821Yes
107F2Rna18280-1.550-0.1737Yes
108RPS3Ana18308-1.570-0.1549Yes
109HIF1Ana18348-1.603-0.1363Yes
110SRGNna18448-1.670-0.1199Yes
111IFNGR1na18491-1.701-0.1002Yes
112DEGS1na18558-1.750-0.0811Yes
113NCK1na18624-1.812-0.0611Yes
114CD47na18753-1.956-0.0426Yes
115UBE2D1na19044-2.500-0.0256Yes
116B2Mna19069-2.6040.0068Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_ALLOGRAFT_REJECTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_ALLOGRAFT_REJECTION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_ALLOGRAFT_REJECTION