Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_CHOLESTEROL_HOMEOSTASIS
Enrichment Score (ES)-0.44398177
Normalized Enrichment Score (NES)-1.8223083
Nominal p-value0.0
FDR q-value0.0016962896
FWER p-Value0.011
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_CHOLESTEROL_HOMEOSTASIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TMEM97na7761.599-0.0143No
2ALCAMna8341.5750.0086No
3GPX8na10441.4960.0223No
4FABP5na14041.3760.0262No
5CHKAna22511.1660.0011No
6HMGCRna23771.1370.0133No
7TNFRSF12Ana30941.008-0.0076No
8FDFT1na31161.0040.0078No
9ACAT2na31221.0020.0240No
10GNAI1na34050.9530.0250No
11PPARGna39150.8660.0126No
12EBPna40900.8380.0173No
13FDPSna49550.713-0.0162No
14NSDHLna49740.712-0.0054No
15PCYT2na54840.640-0.0215No
16ATF5na67910.469-0.0820No
17MVKna70630.439-0.0890No
18ATF3na74100.395-0.1006No
19PLSCR1na83320.290-0.1439No
20HMGCS1na84530.278-0.1456No
21STARD4na89850.214-0.1699No
22LPLna90880.203-0.1719No
23ATXN2na92750.183-0.1786No
24FAM129Ana94650.161-0.1858No
25IDI1na98720.119-0.2051No
26LGMNna102330.077-0.2226No
27DHCR7na103000.069-0.2249No
28FBXO6na109650.000-0.2596No
29ETHE1na11035-0.007-0.2631No
30SQLEna11156-0.021-0.2691No
31GUSBna12358-0.164-0.3291No
32ANXA5na13034-0.249-0.3603No
33LSSna13109-0.259-0.3599No
34CTNNB1na13218-0.277-0.3610No
35FASNna13229-0.278-0.3570No
36HSD17B7na13436-0.306-0.3627No
37PMVKna14256-0.415-0.3987No
38STX5na14354-0.426-0.3968No
39ACSS2na14962-0.508-0.4201No
40MVDna15274-0.559-0.4272No
41JAG1na15596-0.604-0.4340Yes
42PLAURna15641-0.614-0.4263Yes
43GSTM2na15706-0.628-0.4193Yes
44S100A11na15994-0.685-0.4230Yes
45TRIB3na16278-0.753-0.4254Yes
46ECH1na16356-0.770-0.4168Yes
47MAL2na16472-0.805-0.4096Yes
48CYP51A1na16545-0.823-0.3998Yes
49SREBF2na16748-0.869-0.3961Yes
50ANTXR2na17244-1.019-0.4052Yes
51LDLRna17723-1.192-0.4106Yes
52CXCL16na17758-1.205-0.3926Yes
53FADS2na17957-1.308-0.3814Yes
54ABCA2na18102-1.378-0.3663Yes
55SEMA3Bna18153-1.402-0.3458Yes
56NFIL3na18225-1.442-0.3258Yes
57PDK3na18298-1.493-0.3051Yes
58CPEB2na18410-1.581-0.2849Yes
59CD9na18486-1.630-0.2620Yes
60CLUna18498-1.641-0.2356Yes
61PNRC1na18528-1.672-0.2096Yes
62TM7SF2na18655-1.822-0.1862Yes
63LGALS3na18663-1.837-0.1564Yes
64TP53INP1na18721-1.930-0.1277Yes
65ERRFI1na18935-2.395-0.0994Yes
66SCDna19013-2.713-0.0588Yes
67ALDOCna19173-4.1640.0013Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_CHOLESTEROL_HOMEOSTASIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_CHOLESTEROL_HOMEOSTASIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_CHOLESTEROL_HOMEOSTASIS