Datasetexpr.class.cls#HYDEGF_versus_CONTROL.class.cls#HYDEGF_versus_CONTROL_repos
Phenotypeclass.cls#HYDEGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY
Enrichment Score (ES)-0.502627
Normalized Enrichment Score (NES)-1.8921367
Nominal p-value0.0
FDR q-value5.957747E-4
FWER p-Value0.005
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HHEXna4442.1810.0262No
2ERCC2na4552.1720.0748No
3TXNRD2na15681.4030.0485No
4SCAF4na28671.0360.0042No
5ABCC1na30650.9880.0163No
6STK25na36660.8720.0047No
7HMOX2na47040.706-0.0334No
8LSP1na55010.576-0.0619No
9SBNO2na67360.405-0.1172No
10NQO1na70790.362-0.1268No
11CDKN2Dna73120.328-0.1315No
12OXSR1na76590.281-0.1432No
13GCLCna89250.131-0.2063No
14EGLN2na91560.108-0.2159No
15FESna92360.098-0.2178No
16G6PDna100530.012-0.2601No
17PFKPna10539-0.041-0.2845No
18GCLMna10721-0.067-0.2924No
19TXNRD1na11750-0.196-0.3416No
20MBPna11814-0.206-0.3403No
21SRXN1na12662-0.307-0.3775No
22FTLna13490-0.412-0.4114No
23GLRX2na13865-0.469-0.4203No
24MSRAna14310-0.522-0.4317No
25GPX4na14401-0.538-0.4242No
26PRDX4na15690-0.760-0.4742No
27JUNBna15969-0.814-0.4703No
28GSRna16589-0.967-0.4807Yes
29GPX3na16764-1.015-0.4669Yes
30NDUFS2na16865-1.045-0.4484Yes
31TXNna17008-1.092-0.4311Yes
32PRNPna17039-1.101-0.4078Yes
33PDLIM1na17405-1.216-0.3993Yes
34PRDX2na18021-1.496-0.3975Yes
35PRDX1na18026-1.499-0.3638Yes
36PRDX6na18067-1.524-0.3314Yes
37ATOX1na18310-1.694-0.3057Yes
38NDUFA6na18511-1.845-0.2744Yes
39NDUFB4na18632-1.965-0.2362Yes
40GLRXna18639-1.972-0.1918Yes
41CATna18668-2.014-0.1477Yes
42SOD1na18910-2.370-0.1066Yes
43SOD2na18995-2.569-0.0529Yes
44MGST1na19072-2.8010.0066Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY