Datasetexpr.class.cls#HYD_versus_CONTROL.class.cls#HYD_versus_CONTROL_repos
Phenotypeclass.cls#HYD_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.31802762
Normalized Enrichment Score (NES)-1.4840122
Nominal p-value0.0
FDR q-value0.020230923
FWER p-Value0.131
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTPN6na5442.288-0.0073No
2RBCK1na8172.014-0.0028No
3RNF213na12701.704-0.0107No
4UPP1na13071.6850.0031No
5RNF31na17521.469-0.0065No
6NOD1na17911.4460.0050No
7PARP12na19351.3940.0104No
8NLRC5na22221.2650.0072No
9OGFRna25361.1620.0016No
10TRIM26na26851.1220.0043No
11IRF7na30031.036-0.0027No
12NFKB1na36680.878-0.0295No
13IL18BPna37020.870-0.0231No
14LATS2na40160.809-0.0320No
15MARCH1na41360.782-0.0310No
16TRIM14na41530.778-0.0245No
17STAT2na42430.764-0.0221No
18ZNFX1na43720.737-0.0220No
19CIITAna44090.732-0.0170No
20VAMP5na46040.692-0.0208No
21SOCS3na46530.684-0.0169No
22PELI1na47740.664-0.0171No
23ISG15na49160.639-0.0185No
24IFI30na52580.592-0.0309No
25MX1na54020.570-0.0331No
26IRF1na56480.533-0.0410No
27PMLna58930.500-0.0492No
28OASLna60990.470-0.0556No
29SLC25A28na61030.470-0.0514No
30GCH1na61570.463-0.0498No
31ST3GAL5na62080.458-0.0482No
32PTGS2na63250.440-0.0502No
33HERC6na63660.434-0.0482No
34TRIM25na64940.416-0.0510No
35SP110na66910.394-0.0577No
36BANK1na68420.379-0.0620No
37CXCL10na68900.372-0.0610No
38TNFAIP3na69800.364-0.0623No
39SSPNna70750.351-0.0640No
40FGL2na70890.349-0.0614No
41PTPN2na71060.347-0.0590No
42LYSMD2na72300.334-0.0624No
43IL6na72440.333-0.0600No
44DHX58na74920.309-0.0701No
45JAK2na75610.298-0.0708No
46HLA-Gna77710.277-0.0793No
47MVPna77980.273-0.0781No
48PIM1na82190.229-0.0980No
49HLA-DQA1na82290.229-0.0964No
50IL7na83030.219-0.0981No
51PSMB10na83090.219-0.0964No
52C1Sna86700.184-0.1136No
53ADARna87940.167-0.1185No
54SECTM1na88590.158-0.1204No
55IL4Rna91380.135-0.1337No
56SOCS1na93240.113-0.1424No
57CMKLR1na94190.102-0.1464No
58IL15RAna99090.053-0.1716No
59ICAM1na99490.046-0.1732No
60OAS3na101100.027-0.1814No
61CFBna101990.015-0.1858No
62CMPK2na102610.015-0.1889No
63IFI44Lna103000.015-0.1908No
64CASP1na103020.015-0.1907No
65IFI35na104560.000-0.1987No
66PTPN1na10546-0.009-0.2033No
67MX2na10637-0.021-0.2078No
68TAP1na10646-0.022-0.2081No
69PARP14na10807-0.039-0.2161No
70CASP8na10884-0.051-0.2196No
71LY6Ena11120-0.081-0.2312No
72APOL6na11145-0.085-0.2317No
73CD274na11286-0.087-0.2382No
74HLA-DMAna11401-0.101-0.2433No
75PFKPna11433-0.105-0.2439No
76HLA-Bna11495-0.110-0.2461No
77NUP93na11519-0.114-0.2462No
78TAPBPna11603-0.126-0.2494No
79CDKN1Ana11746-0.145-0.2555No
80ITGB7na12009-0.173-0.2677No
81C1Rna12054-0.180-0.2683No
82MYD88na12113-0.189-0.2696No
83IRF2na12188-0.198-0.2717No
84FPR1na12252-0.207-0.2730No
85LGALS3BPna12273-0.209-0.2721No
86NFKBIAna12331-0.218-0.2731No
87CCL2na12375-0.222-0.2733No
88IFNAR2na12530-0.229-0.2793No
89FASna12828-0.261-0.2924No
90HLA-DRB1na12833-0.262-0.2902No
91XAF1na12876-0.268-0.2899No
92GBP4na12911-0.273-0.2892No
93TRIM21na12921-0.274-0.2871No
94CFHna12948-0.278-0.2859No
95CD74na12971-0.280-0.2844No
96CXCL11na13037-0.289-0.2851No
97IFIH1na13280-0.322-0.2949No
98CD40na13309-0.327-0.2933No
99SPPL2Ana13507-0.354-0.3003No
100RAPGEF6na13529-0.357-0.2981No
101IRF9na13588-0.367-0.2977No
102SOD2na13651-0.378-0.2975No
103ISG20na13723-0.391-0.2976No
104PLA2G4Ana13844-0.411-0.3000No
105PNPT1na13873-0.414-0.2977No
106NCOA3na14080-0.428-0.3045No
107NMIna14136-0.432-0.3034No
108DDX60na14208-0.443-0.3030No
109PSMA2na14390-0.475-0.3080No
110TRAFD1na14581-0.503-0.3133Yes
111ARID5Bna14668-0.519-0.3130Yes
112RIPK1na14682-0.520-0.3089Yes
113RSAD2na14852-0.544-0.3127Yes
114RTP4na14854-0.544-0.3077Yes
115PSMA3na15032-0.567-0.3117Yes
116STAT3na15037-0.567-0.3066Yes
117IL15na15098-0.579-0.3044Yes
118PSME2na15141-0.587-0.3011Yes
119BST2na15210-0.597-0.2991Yes
120PSMB8na15412-0.636-0.3038Yes
121PDE4Bna15522-0.656-0.3034Yes
122UBE2L6na15591-0.666-0.3007Yes
123LAP3na15631-0.674-0.2965Yes
124PSMB9na15703-0.682-0.2939Yes
125BTG1na15833-0.711-0.2940Yes
126ISOC1na15866-0.717-0.2890Yes
127IFITM3na15996-0.744-0.2889Yes
128EIF2AK2na16137-0.775-0.2890Yes
129PNPna16242-0.798-0.2871Yes
130CASP4na16359-0.824-0.2855Yes
131EIF4E3na16382-0.828-0.2789Yes
132ST8SIA4na16410-0.834-0.2726Yes
133WARSna16504-0.855-0.2695Yes
134TNFSF10na16587-0.869-0.2657Yes
135RIPK2na16616-0.878-0.2590Yes
136IFITM2na16644-0.884-0.2522Yes
137SLAMF7na16677-0.892-0.2455Yes
138SAMHD1na16685-0.894-0.2376Yes
139STAT1na16812-0.929-0.2355Yes
140SAMD9Lna16828-0.934-0.2276Yes
141IFI44na16919-0.962-0.2234Yes
142TDRD7na16953-0.970-0.2161Yes
143OAS2na16982-0.981-0.2084Yes
144MTHFD2na16986-0.982-0.1994Yes
145VCAM1na16995-0.984-0.1907Yes
146ARL4Ana17123-1.023-0.1878Yes
147MT2Ana17171-1.038-0.1806Yes
148IFIT1na17218-1.058-0.1732Yes
149BATF2na17399-1.118-0.1722Yes
150PLSCR1na17416-1.120-0.1626Yes
151PSMB2na17433-1.128-0.1530Yes
152TXNIPna17600-1.197-0.1506Yes
153PSME1na17774-1.276-0.1478Yes
154IFI27na17788-1.281-0.1365Yes
155USP18na17930-1.341-0.1314Yes
156SRIna17999-1.383-0.1221Yes
157DDX58na18014-1.392-0.1099Yes
158IFIT2na18078-1.429-0.0999Yes
159TOR1Bna18209-1.505-0.0927Yes
160CASP7na18210-1.506-0.0786Yes
161NAMPTna18342-1.596-0.0707Yes
162HIF1Ana18348-1.603-0.0560Yes
163IFIT3na18445-1.669-0.0455Yes
164BPGMna18542-1.737-0.0343Yes
165CASP3na18683-1.879-0.0242Yes
166B2Mna19069-2.604-0.0202Yes
167VAMP8na19121-2.8870.0040Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE