Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_APICAL_JUNCTION
Enrichment Score (ES)-0.37161815
Normalized Enrichment Score (NES)-1.7262362
Nominal p-value0.0
FDR q-value0.003731225
FWER p-Value0.032
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_APICAL_JUNCTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CDH4na612.5640.0160No
2NEGR1na1672.1740.0267No
3CDK8na4321.8180.0265No
4AMIGO2na5211.7570.0350No
5PARD6Gna6041.7020.0434No
6CD274na8361.5740.0431No
7LIMA1na9281.5410.0499No
8NEXNna12271.4340.0449No
9EGFRna12411.4290.0549No
10FBN1na13681.3880.0587No
11NF2na17541.2790.0481No
12MYH10na19331.2390.0480No
13COL16A1na20301.2120.0520No
14COL17A1na21111.1940.0568No
15MPP5na22001.1780.0610No
16ACTN1na23991.1330.0591No
17ICAM2na26861.0790.0521No
18TIAL1na29101.0420.0482No
19PFN1na30181.0250.0503No
20MAPK14na31870.9900.0489No
21TNFRSF11Bna32410.9790.0534No
22GNAI1na34050.9530.0520No
23LAYNna35770.9240.0499No
24DLG1na35790.9240.0568No
25AKT3na36030.9190.0624No
26YWHAHna38640.8750.0553No
27TJP1na44540.7840.0303No
28RASA1na44630.7830.0357No
29EPB41L2na46260.7590.0329No
30PTK2na46360.7580.0381No
31VCLna46600.7550.0426No
32LDLRAP1na48170.7270.0398No
33ZYXna51120.6910.0295No
34CNN2na51400.6860.0333No
35ARPC2na52290.6740.0337No
36SHROOM2na54000.6500.0296No
37CAP1na55360.6340.0273No
38HRASna56180.6230.0277No
39AMHna57120.6070.0273No
40ADAM9na57890.5980.0278No
41NF1na58790.5870.0276No
42MYL12Bna59610.5750.0276No
43ADAM23na59860.5710.0306No
44BAIAP2na60000.5700.0342No
45AMIGO1na60820.5590.0341No
46CD34na62030.5410.0319No
47VASPna64580.5080.0224No
48PCDH1na67080.4790.0129No
49SHC1na67510.4740.0142No
50ATP1A3na74020.396-0.0169No
51VAV2na75800.375-0.0234No
52TSPAN4na76630.367-0.0250No
53IKBKGna77810.352-0.0285No
54RSU1na78120.348-0.0275No
55PARVAna79000.336-0.0295No
56CLDN11na81260.314-0.0390No
57PIK3R3na82280.301-0.0420No
58CDH1na82880.294-0.0429No
59EXOC4na82960.293-0.0411No
60VCANna85740.265-0.0537No
61TUBG1na87080.245-0.0588No
62WNK4na88220.235-0.0630No
63EVLna93650.177-0.0901No
64HADHna94450.164-0.0930No
65MYL9na95710.148-0.0985No
66CLDN9na98230.125-0.1107No
67MAPK11na98400.122-0.1106No
68MPZL1na101730.085-0.1274No
69GAMTna107990.014-0.1601No
70JAM3na108520.007-0.1628No
71PKD1na11013-0.005-0.1712No
72DHX16na11131-0.018-0.1772No
73CDSNna11376-0.047-0.1896No
74AKT2na11631-0.075-0.2024No
75CLDN18na11680-0.082-0.2043No
76PIK3CBna11960-0.120-0.2181No
77CLDN14na12149-0.136-0.2269No
78MADCAM1na12377-0.166-0.2376No
79CLDN15na12531-0.189-0.2442No
80CTNNA1na12562-0.192-0.2443No
81PTENna12643-0.204-0.2470No
82MAP4K2na12685-0.210-0.2476No
83TSC1na12942-0.238-0.2592No
84CDH3na12977-0.242-0.2592No
85SORBS3na13029-0.248-0.2600No
86SYMPKna13202-0.274-0.2670No
87SIRPAna13307-0.288-0.2703No
88PLCG1na13591-0.329-0.2827No
89TAOK2na13961-0.371-0.2993No
90CDH15na14007-0.379-0.2988No
91GTF2F1na14192-0.405-0.3055No
92IRS1na14327-0.421-0.3093No
93CD276na14475-0.441-0.3138No
94WASLna14807-0.498-0.3274No
95CALB2na14948-0.506-0.3310No
96VCAM1na15075-0.525-0.3336No
97MPZL2na15081-0.526-0.3300No
98LAMB3na15267-0.557-0.3355No
99MVDna15274-0.559-0.3316No
100ADAM15na15285-0.561-0.3280No
101SGCEna15791-0.646-0.3496No
102INPPL1na15860-0.659-0.3483No
103NLGN2na16112-0.706-0.3562No
104FSCN1na16186-0.728-0.3546No
105GRB7na16192-0.730-0.3494No
106NRTNna16321-0.762-0.3504No
107RAC2na16465-0.801-0.3519No
108GNAI2na16842-0.901-0.3649Yes
109ADRA1Bna16846-0.904-0.3583Yes
110ARHGEF6na16873-0.912-0.3528Yes
111PBX2na16902-0.921-0.3474Yes
112SRCna16943-0.934-0.3425Yes
113CTNND1na16974-0.944-0.3370Yes
114CLDN4na17113-0.982-0.3369Yes
115SLIT2na17135-0.990-0.3306Yes
116CD99na17216-1.012-0.3272Yes
117CERCAMna17237-1.017-0.3207Yes
118ICAM5na17264-1.026-0.3144Yes
119SKAP2na17486-1.118-0.3176Yes
120B4GALT1na17619-1.157-0.3159Yes
121TMEM8Bna17632-1.161-0.3078Yes
122INSIG1na17727-1.193-0.3038Yes
123SDC3na17812-1.229-0.2990Yes
124TGFBIna17865-1.259-0.2923Yes
125JUPna17913-1.281-0.2852Yes
126ICAM1na17954-1.306-0.2775Yes
127MAPK13na17998-1.329-0.2699Yes
128STX4na18000-1.329-0.2600Yes
129RHOFna18083-1.373-0.2540Yes
130ITGB4na18146-1.397-0.2468Yes
131RRASna18220-1.437-0.2399Yes
132CRATna18281-1.480-0.2320Yes
133SPEGna18434-1.607-0.2279Yes
134TRAF1na18477-1.625-0.2180Yes
135THBS3na18592-1.742-0.2109Yes
136CX3CL1na18661-1.834-0.2008Yes
137CLDN7na18704-1.903-0.1887Yes
138ITGA2na18843-2.164-0.1798Yes
139CDH11na18848-2.179-0.1637Yes
140BMP1na18897-2.311-0.1489Yes
141LAMC2na18985-2.588-0.1341Yes
142PPP2R2Cna19009-2.704-0.1151Yes
143LAMA3na19037-2.819-0.0954Yes
144NLGN3na19091-3.077-0.0752Yes
145MDKna19103-3.166-0.0521Yes
146ITGA10na19142-3.579-0.0273Yes
147PECAM1na19167-4.0330.0016Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_APICAL_JUNCTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_APICAL_JUNCTION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_APICAL_JUNCTION