Datasetexpr.class.cls#HYD_versus_CONTROL.class.cls#HYD_versus_CONTROL_repos
Phenotypeclass.cls#HYD_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)-0.2563261
Normalized Enrichment Score (NES)-1.2305275
Nominal p-value0.026737968
FDR q-value0.12067926
FWER p-Value0.697
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NUMA1na5662.257-0.0102No
2ABL1na9121.940-0.0115No
3PAPD7na12631.707-0.0151No
4RBM14na17661.462-0.0289No
5ODF2na19841.369-0.0284No
6TNPO2na19971.364-0.0172No
7E2F4na22671.252-0.0205No
8UPF1na24091.205-0.0175No
9ILF3na28041.084-0.0288No
10SFPQna28901.065-0.0240No
11SMAD3na28961.064-0.0150No
12CDC25Bna31530.999-0.0198No
13RASAL2na35790.898-0.0344No
14DDX39Ana36370.885-0.0297No
15MYCna37710.854-0.0293No
16CHMP1Ana38540.842-0.0263No
17POLEna39060.832-0.0218No
18CHAF1Ana39070.831-0.0146No
19RAD54Lna39890.814-0.0118No
20POLA2na40050.811-0.0055No
21E2F2na41670.776-0.0073No
22UCK2na42780.756-0.0065No
23E2F1na44220.730-0.0077No
24TLE3na45220.708-0.0068No
25EGFna45420.703-0.0017No
26SLC12A2na45470.7020.0042No
27INCENPna46520.6850.0047No
28MYBL2na46570.6830.0104No
29SMC1Ana47370.6700.0120No
30MARCKSna48310.6520.0128No
31TRA2Bna49570.6340.0117No
32TACC3na50960.6140.0098No
33ESPL1na51080.6120.0145No
34KIF22na51470.6060.0178No
35SLC7A5na51870.6020.0209No
36CDC25Ana54820.5550.0103No
37MCM2na55950.5390.0091No
38AURKBna56620.5300.0102No
39PMLna58930.5000.0024No
40ATF5na59600.4910.0032No
41CDKN1Bna60430.4810.0031No
42TRAIPna60870.4730.0049No
43CCNFna61050.4700.0081No
44CDKN2Cna61160.4690.0117No
45MAPK14na62230.4550.0100No
46EZH2na62970.4450.0100No
47CDC45na64920.4170.0035No
48POLQna65330.4120.0049No
49TROAPna66350.4030.0031No
50PRPF4Bna68770.374-0.0063No
51DTYMKna69120.367-0.0049No
52SLC7A1na70590.353-0.0096No
53CUL4Ana71840.341-0.0131No
54SRSF10na73670.316-0.0199No
55CCND1na74940.308-0.0239No
56TFDP1na77380.282-0.0342No
57FANCCna78100.271-0.0356No
58CDC7na81910.234-0.0536No
59UBE2Sna82710.223-0.0558No
60BARD1na83230.217-0.0566No
61H2AFXna83280.216-0.0550No
62MCM5na83830.209-0.0560No
63NOTCH2na83940.208-0.0547No
64CDC6na86050.191-0.0641No
65ODC1na88520.159-0.0757No
66NOLC1na91420.135-0.0897No
67HIRAna91770.129-0.0904No
68LMNB1na91900.127-0.0899No
69PAFAH1B1na91940.126-0.0889No
70GINS2na94530.096-0.1017No
71CDC20na96170.086-0.1095No
72MCM3na96370.083-0.1098No
73YTHDC1na97060.076-0.1127No
74E2F3na98930.056-0.1220No
75TGFB1na99370.048-0.1239No
76LIG3na10471-0.002-0.1519No
77BCL3na10566-0.012-0.1567No
78HNRNPUna10586-0.015-0.1576No
79EWSR1na10668-0.026-0.1616No
80NUP50na10727-0.032-0.1644No
81CASP8AP2na10789-0.036-0.1673No
82EFNA5na10800-0.037-0.1675No
83PLK1na10895-0.053-0.1720No
84MEIS1na10978-0.063-0.1757No
85STAG1na11103-0.080-0.1816No
86SMC4na11306-0.090-0.1914No
87MAD2L1na11353-0.097-0.1930No
88KIF4Ana11399-0.101-0.1945No
89SRSF1na11410-0.102-0.1941No
90RBL1na11426-0.104-0.1940No
91PURAna11496-0.110-0.1967No
92EXO1na11505-0.112-0.1961No
93CBX1na11686-0.137-0.2044No
94CDKN3na11708-0.139-0.2043No
95MNAT1na11709-0.139-0.2031No
96MCM6na11728-0.142-0.2028No
97CUL5na11886-0.161-0.2097No
98DKC1na11919-0.166-0.2100No
99KIF2Cna11924-0.166-0.2087No
100SNRPD1na11926-0.166-0.2073No
101KIF15na12046-0.179-0.2120No
102BUB1na12059-0.180-0.2111No
103HMGN2na12062-0.181-0.2096No
104KIF23na12161-0.194-0.2131No
105ARID4Ana12181-0.198-0.2124No
106TPX2na12233-0.204-0.2133No
107ORC6na12622-0.237-0.2317No
108SUV39H1na12643-0.239-0.2306No
109SMARCC1na12750-0.252-0.2340No
110RAD23Bna12787-0.256-0.2337No
111NUSAP1na12808-0.258-0.2325No
112PRIM2na12834-0.262-0.2316No
113CENPFna12914-0.273-0.2333No
114CUL3na12990-0.282-0.2348No
115WRNna13165-0.309-0.2413No
116KIF11na13273-0.320-0.2442No
117MEIS2na13451-0.345-0.2505No
118KIF5Bna13478-0.350-0.2488No
119RACGAP1na13570-0.365-0.2505No
120NCLna13574-0.366-0.2474No
121CTCFna13744-0.395-0.2529Yes
122BUB3na13790-0.401-0.2518Yes
123PLK4na13826-0.410-0.2501Yes
124MTF2na13832-0.411-0.2468Yes
125CHEK1na13855-0.412-0.2444Yes
126DR1na13996-0.415-0.2481Yes
127NASPna14013-0.418-0.2453Yes
128KIF20Bna14040-0.422-0.2430Yes
129NUP98na14128-0.430-0.2439Yes
130STILna14238-0.449-0.2457Yes
131DBF4na14298-0.463-0.2448Yes
132LBRna14304-0.464-0.2410Yes
133BRCA2na14335-0.469-0.2386Yes
134AURKAna14577-0.502-0.2469Yes
135BIRC5na14629-0.512-0.2451Yes
136G3BP1na14666-0.518-0.2425Yes
137KPNB1na14673-0.519-0.2383Yes
138FOXN3na14685-0.520-0.2344Yes
139CUL1na14693-0.522-0.2302Yes
140CCNA2na14794-0.537-0.2309Yes
141TMPOna14804-0.538-0.2267Yes
142PBKna15143-0.588-0.2393Yes
143DMDna15243-0.605-0.2393Yes
144SAP30na15285-0.614-0.2361Yes
145ATRXna15309-0.618-0.2320Yes
146GSPT1na15339-0.624-0.2281Yes
147STMN1na15496-0.649-0.2307Yes
148H2AFZna15730-0.688-0.2370Yes
149CENPEna15857-0.715-0.2374Yes
150NDC80na15904-0.723-0.2335Yes
151UBE2Cna15936-0.731-0.2288Yes
152RPS6KA5na15965-0.737-0.2239Yes
153TOP2Ana15987-0.741-0.2186Yes
154AMD1na16032-0.755-0.2144Yes
155PRC1na16085-0.766-0.2104Yes
156RAD21na16290-0.809-0.2142Yes
157SMC2na16293-0.809-0.2072Yes
158SQLEna16311-0.813-0.2011Yes
159HMMRna16468-0.845-0.2020Yes
160H2AFVna16477-0.848-0.1950Yes
161SRSF2na16515-0.858-0.1895Yes
162PDS5Bna16521-0.859-0.1824Yes
163CCNT1na16766-0.917-0.1872Yes
164CDK1na16949-0.970-0.1884Yes
165CDK4na16963-0.974-0.1806Yes
166XPO1na16967-0.975-0.1723Yes
167CENPAna17024-0.993-0.1667Yes
168CCNB2na17048-0.999-0.1592Yes
169CKS1Bna17139-1.027-0.1550Yes
170MT2Ana17171-1.038-0.1477Yes
171SLC38A1na17286-1.078-0.1443Yes
172KPNA2na17340-1.098-0.1376Yes
173TOP1na17369-1.108-0.1294Yes
174PTTG1na17418-1.121-0.1222Yes
175HMGB3na17427-1.125-0.1129Yes
176HIST1H2BKna17553-1.178-0.1093Yes
177ORC5na17666-1.228-0.1045Yes
178SYNCRIPna17710-1.247-0.0959Yes
179FBXO5na17725-1.253-0.0858Yes
180NEK2na17957-1.352-0.0862Yes
181PRMT5na18005-1.386-0.0767Yes
182HNRNPDna18008-1.388-0.0648Yes
183RPA2na18162-1.475-0.0600Yes
184HIF1Ana18348-1.603-0.0558Yes
185HUS1na18375-1.622-0.0431Yes
186CDC27na18397-1.639-0.0300Yes
187CKS2na18444-1.669-0.0180Yes
188SS18na18730-1.926-0.0163Yes
189TTKna18742-1.9450.0000Yes
190KATNA1na19102-2.7560.0051Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT