Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)-0.50280875
Normalized Enrichment Score (NES)-2.2325604
Nominal p-value0.0
FDR q-value4.0000002E-4
FWER p-Value0.001
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PNPT1na3201.9260.0062No
2TRIM14na3631.8770.0263No
3ISG15na19641.231-0.0428No
4USP18na22891.159-0.0459No
5PARP12na25391.104-0.0458No
6TRIM25na26631.082-0.0394No
7RSAD2na32980.971-0.0610No
8CASP8na37660.890-0.0749No
9HERC6na40810.839-0.0813No
10PSMA3na44490.785-0.0912No
11LAP3na46500.756-0.0926No
12IFI44Lna49580.713-0.1002No
13SAMD9Lna51660.682-0.1029No
14EIF2AK2na61650.547-0.1487No
15RTP4na62270.536-0.1455No
16GMPRna63410.522-0.1452No
17PROCRna63830.516-0.1412No
18NMIna66670.482-0.1503No
19SP110na68040.467-0.1518No
20SAMD9na69010.456-0.1514No
21TDRD7na69470.451-0.1484No
22IFIT3na70010.447-0.1459No
23LPAR6na71540.427-0.1487No
24PSME2na79800.328-0.1880No
25IRF2na80350.322-0.1870No
26PLSCR1na83320.290-0.1991No
27IFIT2na85450.266-0.2070No
28TRIM26na85990.261-0.2066No
29IFI44na89020.223-0.2198No
30SLC25A28na98310.123-0.2669No
31TRIM5na101990.082-0.2851No
32CNPna102350.077-0.2860No
33CASP1na103910.060-0.2934No
34CMPK2na108620.006-0.3180No
35ADARna11005-0.004-0.3254No
36DDX60na11988-0.124-0.3753No
37WARSna12021-0.127-0.3754No
38ELF1na12748-0.221-0.4108No
39LAMP3na13043-0.250-0.4232No
40TRIM21na13344-0.295-0.4354No
41IL7na13349-0.295-0.4321No
42MX1na13486-0.314-0.4355No
43OAS1na13532-0.321-0.4340No
44RNF31na13607-0.331-0.4339No
45IFI30na13832-0.356-0.4414No
46CXCL10na13845-0.359-0.4378No
47OASLna14184-0.403-0.4507No
48MOV10na14651-0.472-0.4694No
49IRF7na14815-0.500-0.4720No
50NUB1na15209-0.548-0.4861No
51NCOA7na15338-0.572-0.4860No
52RIPK2na15343-0.573-0.4794No
53IFIH1na15792-0.647-0.4951Yes
54IL15na15840-0.654-0.4898Yes
55TRAFD1na15985-0.683-0.4892Yes
56CCRL2na16115-0.706-0.4875Yes
57IRF9na16304-0.759-0.4883Yes
58IFI35na16370-0.774-0.4825Yes
59UBE2L6na16481-0.806-0.4787Yes
60OGFRna16562-0.826-0.4731Yes
61LY6Ena16861-0.908-0.4778Yes
62PSME1na16865-0.910-0.4672Yes
63IFITM1na17072-0.969-0.4664Yes
64TMEM140na17094-0.975-0.4559Yes
65PSMB8na17300-1.042-0.4543Yes
66IFITM3na17388-1.072-0.4460Yes
67BATF2na17393-1.073-0.4335Yes
68TAP1na17413-1.084-0.4216Yes
69IFITM2na17476-1.113-0.4116Yes
70FAM46Ana17839-1.249-0.4157Yes
71LGALS3BPna17867-1.260-0.4021Yes
72IRF1na18023-1.342-0.3942Yes
73IL4Rna18107-1.380-0.3822Yes
74STAT2na18119-1.384-0.3663Yes
75PSMB9na18166-1.407-0.3519Yes
76PARP14na18354-1.529-0.3435Yes
77CD74na18418-1.591-0.3279Yes
78CD47na18478-1.626-0.3116Yes
79ISG20na18505-1.647-0.2934Yes
80HLA-Cna18568-1.706-0.2763Yes
81TXNIPna18572-1.710-0.2561Yes
82B2Mna18622-1.775-0.2376Yes
83PARP9na18679-1.860-0.2184Yes
84BST2na18856-2.210-0.2013Yes
85C1Sna18893-2.301-0.1758Yes
86DHX58na18900-2.322-0.1485Yes
87GBP4na18924-2.365-0.1215Yes
88UBA7na18962-2.492-0.0938Yes
89GBP2na18974-2.541-0.0641Yes
90IFI27na19088-3.055-0.0337Yes
91CXCL11na19118-3.3110.0042Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE