Datasetexpr.class.cls#HYDEGF_versus_CONTROL.class.cls#HYDEGF_versus_CONTROL_repos
Phenotypeclass.cls#HYDEGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_CHOLESTEROL_HOMEOSTASIS
Enrichment Score (ES)-0.43564913
Normalized Enrichment Score (NES)-1.7580246
Nominal p-value0.0024038462
FDR q-value0.0018882774
FWER p-Value0.021
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_CHOLESTEROL_HOMEOSTASIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ATF3na4732.1540.0108No
2CHKAna8401.7880.0212No
3TNFRSF12Ana11301.6110.0327No
4PCYT2na14811.4390.0382No
5EBPna26271.097-0.0036No
6ATF5na35110.903-0.0348No
7FASNna35780.888-0.0236No
8ATXN2na35950.885-0.0098No
9LSSna36600.8730.0012No
10ETHE1na51070.636-0.0639No
11TRIB3na54080.590-0.0698No
12MVKna60890.491-0.0973No
13SEMA3Bna67550.403-0.1254No
14MVDna69480.379-0.1291No
15ABCA2na69510.379-0.1230No
16ALCAMna74680.309-0.1449No
17STX5na79320.252-0.1649No
18GNAI1na79720.246-0.1629No
19LDLRna80200.241-0.1614No
20FBXO6na97600.042-0.2516No
21ACSS2na100650.010-0.2673No
22FAM129Ana10690-0.064-0.2989No
23PMVKna10851-0.085-0.3058No
24GUSBna10994-0.105-0.3115No
25ACAT2na11541-0.166-0.3373No
26GSTM2na11557-0.169-0.3353No
27LPLna11671-0.184-0.3382No
28CYP51A1na11845-0.211-0.3437No
29HMGCS1na11862-0.213-0.3411No
30TMEM97na12724-0.318-0.3808No
31GPX8na13049-0.349-0.3920No
32HSD17B7na13211-0.372-0.3942No
33TM7SF2na13337-0.393-0.3943No
34FDPSna13646-0.433-0.4032No
35SREBF2na13672-0.437-0.3973No
36LGMNna13973-0.484-0.4050No
37PLAURna14166-0.503-0.4068No
38ECH1na14216-0.507-0.4010No
39PLSCR1na14338-0.526-0.3986No
40HMGCRna14351-0.528-0.3905No
41CXCL16na15018-0.636-0.4148No
42FABP5na15412-0.703-0.4237Yes
43PPARGna15629-0.748-0.4227Yes
44NFIL3na15878-0.797-0.4225Yes
45NSDHLna16044-0.831-0.4174Yes
46FDFT1na16053-0.834-0.4041Yes
47CPEB2na16059-0.836-0.3905Yes
48JAG1na16098-0.843-0.3786Yes
49FADS2na16193-0.868-0.3692Yes
50DHCR7na16459-0.938-0.3676Yes
51ANTXR2na16566-0.960-0.3572Yes
52SQLEna16592-0.967-0.3426Yes
53PNRC1na16832-1.038-0.3380Yes
54STARD4na16981-1.083-0.3278Yes
55CTNNB1na17952-1.465-0.3543Yes
56IDI1na18098-1.547-0.3364Yes
57ANXA5na18348-1.710-0.3212Yes
58S100A11na18360-1.721-0.2933Yes
59LGALS3na18514-1.848-0.2708Yes
60CLUna18586-1.909-0.2431Yes
61TP53INP1na18743-2.103-0.2165Yes
62MAL2na18756-2.121-0.1821Yes
63PDK3na18854-2.278-0.1496Yes
64SCDna18875-2.317-0.1124Yes
65ERRFI1na18921-2.402-0.0751Yes
66CD9na19017-2.631-0.0366Yes
67ALDOCna19062-2.7880.0071Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_CHOLESTEROL_HOMEOSTASIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_CHOLESTEROL_HOMEOSTASIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_CHOLESTEROL_HOMEOSTASIS