Dataset | expr.class.cls#HYDEGF_versus_CONTROL.class.cls#HYDEGF_versus_CONTROL_repos |
Phenotype | class.cls#HYDEGF_versus_CONTROL_repos |
Upregulated in class | CONTROL |
GeneSet | HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION |
Enrichment Score (ES) | -0.42014992 |
Normalized Enrichment Score (NES) | -1.949935 |
Nominal p-value | 0.0 |
FDR q-value | 2.926038E-4 |
FWER p-Value | 0.002 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | EFEMP2 | na | 247 | 2.477 | 0.0034 | No | ||
2 | GADD45B | na | 524 | 2.096 | 0.0028 | No | ||
3 | FBLN1 | na | 689 | 1.914 | 0.0068 | No | ||
4 | MYLK | na | 828 | 1.802 | 0.0115 | No | ||
5 | COL6A3 | na | 1059 | 1.646 | 0.0103 | No | ||
6 | TNFRSF12A | na | 1130 | 1.611 | 0.0173 | No | ||
7 | PVR | na | 1204 | 1.566 | 0.0238 | No | ||
8 | MCM7 | na | 1322 | 1.505 | 0.0276 | No | ||
9 | FSTL3 | na | 1328 | 1.503 | 0.0373 | No | ||
10 | ACTA2 | na | 1336 | 1.499 | 0.0469 | No | ||
11 | ID2 | na | 1377 | 1.479 | 0.0545 | No | ||
12 | OXTR | na | 1826 | 1.318 | 0.0397 | No | ||
13 | COL1A1 | na | 1873 | 1.303 | 0.0459 | No | ||
14 | ECM2 | na | 1886 | 1.299 | 0.0539 | No | ||
15 | PMEPA1 | na | 1964 | 1.277 | 0.0583 | No | ||
16 | COL4A2 | na | 1989 | 1.269 | 0.0654 | No | ||
17 | COL16A1 | na | 2059 | 1.249 | 0.0701 | No | ||
18 | VEGFC | na | 2234 | 1.201 | 0.0689 | No | ||
19 | COL5A2 | na | 2434 | 1.144 | 0.0660 | No | ||
20 | GADD45A | na | 2798 | 1.052 | 0.0539 | No | ||
21 | COL7A1 | na | 2849 | 1.041 | 0.0582 | No | ||
22 | TAGLN | na | 2945 | 1.017 | 0.0599 | No | ||
23 | APLP1 | na | 3214 | 0.956 | 0.0522 | No | ||
24 | ADAM12 | na | 3301 | 0.943 | 0.0539 | No | ||
25 | COL8A2 | na | 3353 | 0.933 | 0.0574 | No | ||
26 | ABI3BP | na | 3416 | 0.919 | 0.0602 | No | ||
27 | TPM2 | na | 3484 | 0.908 | 0.0627 | No | ||
28 | CTGF | na | 3508 | 0.903 | 0.0675 | No | ||
29 | LAMA2 | na | 3609 | 0.883 | 0.0680 | No | ||
30 | GPC1 | na | 3618 | 0.882 | 0.0735 | No | ||
31 | COL12A1 | na | 4059 | 0.802 | 0.0557 | No | ||
32 | LOXL1 | na | 4517 | 0.732 | 0.0365 | No | ||
33 | COL5A1 | na | 4746 | 0.696 | 0.0292 | No | ||
34 | CD44 | na | 5293 | 0.607 | 0.0045 | No | ||
35 | BDNF | na | 5346 | 0.597 | 0.0057 | No | ||
36 | JUN | na | 5642 | 0.555 | -0.0061 | No | ||
37 | SNTB1 | na | 5662 | 0.552 | -0.0034 | No | ||
38 | COL1A2 | na | 5782 | 0.534 | -0.0062 | No | ||
39 | CAP2 | na | 5864 | 0.523 | -0.0069 | No | ||
40 | FBN1 | na | 6535 | 0.433 | -0.0393 | No | ||
41 | NOTCH2 | na | 7202 | 0.343 | -0.0719 | No | ||
42 | PDGFRB | na | 7303 | 0.329 | -0.0750 | No | ||
43 | TGFBR3 | na | 7326 | 0.326 | -0.0740 | No | ||
44 | CADM1 | na | 7418 | 0.314 | -0.0767 | No | ||
45 | VCAN | na | 7533 | 0.301 | -0.0807 | No | ||
46 | DKK1 | na | 7601 | 0.292 | -0.0823 | No | ||
47 | PLOD3 | na | 7602 | 0.292 | -0.0804 | No | ||
48 | TPM1 | na | 7718 | 0.276 | -0.0846 | No | ||
49 | FSTL1 | na | 8207 | 0.222 | -0.1087 | No | ||
50 | BASP1 | na | 8228 | 0.218 | -0.1083 | No | ||
51 | MYL9 | na | 8322 | 0.207 | -0.1119 | No | ||
52 | TNFRSF11B | na | 8824 | 0.144 | -0.1372 | No | ||
53 | HTRA1 | na | 8915 | 0.133 | -0.1410 | No | ||
54 | LRRC15 | na | 9121 | 0.111 | -0.1511 | No | ||
55 | QSOX1 | na | 9271 | 0.093 | -0.1583 | No | ||
56 | BMP1 | na | 9326 | 0.085 | -0.1606 | No | ||
57 | MATN3 | na | 9620 | 0.058 | -0.1756 | No | ||
58 | COL4A1 | na | 9646 | 0.056 | -0.1765 | No | ||
59 | NID2 | na | 9949 | 0.024 | -0.1922 | No | ||
60 | PTHLH | na | 9984 | 0.024 | -0.1938 | No | ||
61 | SNAI2 | na | 10596 | -0.050 | -0.2256 | No | ||
62 | PCOLCE2 | na | 10786 | -0.077 | -0.2350 | No | ||
63 | ITGB5 | na | 11075 | -0.118 | -0.2493 | No | ||
64 | LOXL2 | na | 11483 | -0.161 | -0.2696 | No | ||
65 | MEST | na | 11757 | -0.197 | -0.2826 | No | ||
66 | CALD1 | na | 11772 | -0.199 | -0.2821 | No | ||
67 | RHOB | na | 11865 | -0.214 | -0.2855 | No | ||
68 | IL15 | na | 12671 | -0.309 | -0.3257 | No | ||
69 | MAGEE1 | na | 12692 | -0.312 | -0.3247 | No | ||
70 | FZD8 | na | 12693 | -0.312 | -0.3226 | No | ||
71 | PDLIM4 | na | 12694 | -0.313 | -0.3205 | No | ||
72 | ELN | na | 12943 | -0.335 | -0.3313 | No | ||
73 | CAPG | na | 12979 | -0.337 | -0.3310 | No | ||
74 | TNC | na | 13218 | -0.374 | -0.3410 | No | ||
75 | LRP1 | na | 13236 | -0.376 | -0.3394 | No | ||
76 | VCAM1 | na | 13271 | -0.382 | -0.3386 | No | ||
77 | SDC1 | na | 13322 | -0.390 | -0.3387 | No | ||
78 | LAMA3 | na | 13513 | -0.415 | -0.3459 | No | ||
79 | SPOCK1 | na | 13532 | -0.418 | -0.3441 | No | ||
80 | FAS | na | 13787 | -0.456 | -0.3544 | No | ||
81 | THBS2 | na | 13821 | -0.462 | -0.3531 | No | ||
82 | PCOLCE | na | 13967 | -0.483 | -0.3575 | No | ||
83 | SLC6A8 | na | 14163 | -0.502 | -0.3644 | No | ||
84 | PLAUR | na | 14166 | -0.503 | -0.3612 | No | ||
85 | MMP3 | na | 14191 | -0.504 | -0.3591 | No | ||
86 | TGFB1 | na | 14260 | -0.515 | -0.3593 | No | ||
87 | FERMT2 | na | 14467 | -0.551 | -0.3665 | No | ||
88 | LAMC1 | na | 14471 | -0.552 | -0.3630 | No | ||
89 | COL6A2 | na | 14661 | -0.583 | -0.3691 | No | ||
90 | INHBA | na | 14670 | -0.585 | -0.3656 | No | ||
91 | ENO2 | na | 14703 | -0.591 | -0.3634 | No | ||
92 | RGS4 | na | 15008 | -0.634 | -0.3751 | No | ||
93 | SERPINH1 | na | 15083 | -0.648 | -0.3747 | No | ||
94 | WIPF1 | na | 15234 | -0.675 | -0.3782 | No | ||
95 | GPX7 | na | 15382 | -0.700 | -0.3812 | No | ||
96 | PLOD1 | na | 15757 | -0.775 | -0.3957 | No | ||
97 | PFN2 | na | 15776 | -0.779 | -0.3915 | No | ||
98 | VIM | na | 16205 | -0.871 | -0.4082 | No | ||
99 | EMP3 | na | 16303 | -0.898 | -0.4074 | No | ||
100 | COPA | na | 16547 | -0.956 | -0.4138 | Yes | ||
101 | GJA1 | na | 16597 | -0.968 | -0.4100 | Yes | ||
102 | CXCL1 | na | 16603 | -0.969 | -0.4038 | Yes | ||
103 | TIMP1 | na | 16662 | -0.990 | -0.4003 | Yes | ||
104 | TGFBI | na | 16713 | -1.002 | -0.3963 | Yes | ||
105 | TGM2 | na | 16812 | -1.030 | -0.3947 | Yes | ||
106 | DPYSL3 | na | 16829 | -1.037 | -0.3887 | Yes | ||
107 | TNFAIP3 | na | 16896 | -1.053 | -0.3852 | Yes | ||
108 | CTHRC1 | na | 16991 | -1.088 | -0.3829 | Yes | ||
109 | GLIPR1 | na | 17107 | -1.114 | -0.3816 | Yes | ||
110 | ITGA5 | na | 17223 | -1.152 | -0.3800 | Yes | ||
111 | MATN2 | na | 17264 | -1.166 | -0.3744 | Yes | ||
112 | FUCA1 | na | 17274 | -1.170 | -0.3671 | Yes | ||
113 | PPIB | na | 17331 | -1.194 | -0.3622 | Yes | ||
114 | LOX | na | 17366 | -1.203 | -0.3560 | Yes | ||
115 | NT5E | na | 17372 | -1.205 | -0.3483 | Yes | ||
116 | ECM1 | na | 17433 | -1.227 | -0.3433 | Yes | ||
117 | GEM | na | 17445 | -1.234 | -0.3357 | Yes | ||
118 | PLOD2 | na | 17461 | -1.240 | -0.3283 | Yes | ||
119 | SLIT2 | na | 17519 | -1.266 | -0.3229 | Yes | ||
120 | SERPINE2 | na | 17637 | -1.308 | -0.3204 | Yes | ||
121 | IL32 | na | 17743 | -1.353 | -0.3170 | Yes | ||
122 | SFRP1 | na | 17787 | -1.375 | -0.3102 | Yes | ||
123 | LGALS1 | na | 17822 | -1.398 | -0.3027 | Yes | ||
124 | PTX3 | na | 17871 | -1.426 | -0.2958 | Yes | ||
125 | DAB2 | na | 17915 | -1.448 | -0.2885 | Yes | ||
126 | MMP1 | na | 17947 | -1.463 | -0.2804 | Yes | ||
127 | PMP22 | na | 18110 | -1.553 | -0.2786 | Yes | ||
128 | WNT5A | na | 18187 | -1.597 | -0.2721 | Yes | ||
129 | IL6 | na | 18227 | -1.619 | -0.2634 | Yes | ||
130 | TPM4 | na | 18344 | -1.707 | -0.2582 | Yes | ||
131 | CALU | na | 18483 | -1.826 | -0.2534 | Yes | ||
132 | SGCB | na | 18513 | -1.847 | -0.2427 | Yes | ||
133 | SPARC | na | 18543 | -1.861 | -0.2319 | Yes | ||
134 | IGFBP3 | na | 18665 | -2.008 | -0.2250 | Yes | ||
135 | TIMP3 | na | 18706 | -2.053 | -0.2135 | Yes | ||
136 | SDC4 | na | 18719 | -2.074 | -0.2004 | Yes | ||
137 | ITGAV | na | 18729 | -2.091 | -0.1871 | Yes | ||
138 | PRSS2 | na | 18762 | -2.129 | -0.1747 | Yes | ||
139 | LAMC2 | na | 18772 | -2.148 | -0.1609 | Yes | ||
140 | NNMT | na | 18828 | -2.244 | -0.1490 | Yes | ||
141 | SCG2 | na | 18839 | -2.267 | -0.1345 | Yes | ||
142 | AREG | na | 18856 | -2.288 | -0.1202 | Yes | ||
143 | CD59 | na | 18886 | -2.333 | -0.1063 | Yes | ||
144 | CDH11 | na | 18932 | -2.418 | -0.0927 | Yes | ||
145 | EDIL3 | na | 18945 | -2.445 | -0.0772 | Yes | ||
146 | ITGA2 | na | 18964 | -2.492 | -0.0616 | Yes | ||
147 | ITGB3 | na | 18981 | -2.535 | -0.0457 | Yes | ||
148 | TFPI2 | na | 18994 | -2.568 | -0.0293 | Yes | ||
149 | PRRX1 | na | 19101 | -2.909 | -0.0157 | Yes | ||
150 | SAT1 | na | 19134 | -3.131 | 0.0034 | Yes |