Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_APOPTOSIS
Enrichment Score (ES)-0.37425458
Normalized Enrichment Score (NES)-1.7650607
Nominal p-value0.0
FDR q-value0.002575807
FWER p-Value0.021
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_APOPTOSIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL18na1522.2020.0088No
2SMAD7na1952.1080.0226No
3CCNA1na3441.8970.0293No
4PPT1na3791.8630.0417No
5DFFAna7561.6060.0342No
6PEA15na8401.5730.0419No
7DAP3na9541.5270.0476No
8CASP3na11551.4580.0482No
9HMGB2na11831.4460.0578No
10GADD45Bna12831.4170.0634No
11CAV1na15421.3350.0600No
12BRCA1na16201.3120.0660No
13ETF1na16521.3070.0743No
14LEF1na16661.3040.0835No
15ROCK1na17021.2940.0916No
16CASP2na20781.2010.0810No
17TOP2Ana21511.1890.0863No
18CDK2na23111.1530.0868No
19CCND1na24001.1330.0908No
20DIABLOna25831.0970.0896No
21SPTAN1na27251.0720.0903No
22HMOX1na30111.0260.0832No
23TNFRSF12Ana30941.0080.0866No
24KRT18na32360.9800.0866No
25CASP8na37660.8900.0657No
26DNAJA1na38840.8710.0662No
27CD44na39540.8600.0691No
28BTG3na39850.8530.0740No
29WEE1na39910.8510.0802No
30EBPna40900.8380.0815No
31PTK2na46360.7580.0586No
32DPYDna47440.7390.0587No
33CYLDna49370.7150.0540No
34ANXA1na52680.6690.0418No
35DNM1Lna53110.6630.0447No
36CASP7na56060.6250.0340No
37PMAIP1na60920.5580.0128No
38GADD45Ana61020.5550.0166No
39PLCB2na61290.5510.0194No
40FASna62660.5320.0163No
41DDIT3na67940.469-0.0078No
42GCH1na68810.459-0.0088No
43BCAP31na71570.427-0.0200No
44ATF3na74100.395-0.0302No
45F2Rna74300.393-0.0282No
46FDXRna77070.362-0.0399No
47VDAC2na78300.346-0.0437No
48SOD1na79450.332-0.0471No
49CTHna79700.329-0.0459No
50BAXna80920.317-0.0498No
51TGFB2na81170.315-0.0487No
52TGFBR3na89510.217-0.0907No
53BCL2L2na91050.201-0.0972No
54FEZ1na92290.190-0.1022No
55SLC20A1na93380.179-0.1065No
56RHOT2na95430.152-0.1161No
57GSTM1na97720.128-0.1271No
58CREBBPna97900.126-0.1270No
59NEFHna100440.100-0.1395No
60CASP1na103910.060-0.1572No
61CASP4na109640.000-0.1872No
62PSEN2na11451-0.056-0.2123No
63MADDna11651-0.078-0.2221No
64BTG2na11938-0.118-0.2363No
65CDC25Bna12061-0.134-0.2416No
66PPP3R1na12294-0.154-0.2526No
67BCL2L1na12327-0.159-0.2531No
68RETSATna12351-0.162-0.2531No
69MCL1na12451-0.179-0.2569No
70ADD1na12475-0.181-0.2567No
71JUNna12605-0.199-0.2620No
72PPP2R5Bna12652-0.205-0.2628No
73CTNNB1na13218-0.277-0.2904No
74TIMP2na13317-0.291-0.2933No
75TSPOna13324-0.292-0.2914No
76PAK1na13679-0.342-0.3074No
77BIDna13709-0.347-0.3063No
78CASP9na13830-0.355-0.3098No
79CDKN1Bna13864-0.360-0.3088No
80CASP6na13966-0.372-0.3113No
81DNAJC3na14042-0.384-0.3123No
82GPX1na14229-0.410-0.3189No
83HSPB1na14244-0.413-0.3165No
84GSRna14564-0.456-0.3298No
85RELAna14752-0.488-0.3359No
86PSEN1na15031-0.515-0.3466No
87XIAPna15171-0.541-0.3497No
88ERBB2na15220-0.550-0.3481No
89IGF2Rna15552-0.602-0.3608No
90GNA15na15638-0.613-0.3606No
91TNFna15826-0.653-0.3655No
92CDKN1Ana15950-0.678-0.3668No
93IL1Ana16094-0.702-0.3689Yes
94DAPna16189-0.729-0.3683Yes
95GPX3na16209-0.732-0.3637Yes
96H1F0na16221-0.737-0.3587Yes
97ERBB3na16345-0.768-0.3593Yes
98RARAna16355-0.770-0.3539Yes
99RHOBna16399-0.781-0.3502Yes
100BCL2L11na16498-0.810-0.3492Yes
101CD14na16595-0.833-0.3479Yes
102EMP1na16599-0.834-0.3417Yes
103GPX4na16614-0.837-0.3360Yes
104BCL10na16617-0.838-0.3297Yes
105SQSTM1na16663-0.848-0.3256Yes
106EGR3na16779-0.878-0.3250Yes
107EREGna16952-0.936-0.3269Yes
108ANKHna17223-1.014-0.3333Yes
109IFNGR1na17299-1.042-0.3293Yes
110BIKna17323-1.050-0.3225Yes
111CCND2na17385-1.070-0.3176Yes
112IFITM3na17388-1.072-0.3095Yes
113TAP1na17413-1.084-0.3025Yes
114BNIP3Lna17581-1.142-0.3026Yes
115TIMP1na17600-1.148-0.2948Yes
116IRF1na18023-1.342-0.3067Yes
117PDGFRBna18059-1.357-0.2982Yes
118BMFna18174-1.411-0.2935Yes
119IL1Bna18217-1.433-0.2847Yes
120GSNna18275-1.477-0.2765Yes
121ENO2na18286-1.481-0.2657Yes
122RNASELna18309-1.502-0.2554Yes
123APPna18352-1.528-0.2460Yes
124NEDD9na18380-1.552-0.2356Yes
125CFLARna18417-1.589-0.2254Yes
126TNFSF10na18488-1.633-0.2166Yes
127CLUna18498-1.641-0.2046Yes
128ISG20na18505-1.647-0.1924Yes
129TXNIPna18572-1.710-0.1828Yes
130PLATna18660-1.832-0.1734Yes
131LGALS3na18663-1.837-0.1595Yes
132IL6na18776-2.020-0.1500Yes
133TIMP3na18862-2.233-0.1375Yes
134SOD2na18970-2.521-0.1239Yes
135IGFBP6na18978-2.554-0.1048Yes
136PDCD4na18987-2.595-0.0855Yes
137BIRC3na19043-2.872-0.0665Yes
138SATB1na19064-2.931-0.0452Yes
139BMP2na19119-3.339-0.0226Yes
140SAT1na19139-3.5060.0031Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_APOPTOSIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_APOPTOSIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_APOPTOSIS