Datasetexpr.class.cls#EGF_versus_CONTROL.class.cls#EGF_versus_CONTROL_repos
Phenotypeclass.cls#EGF_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.43881312
Normalized Enrichment Score (NES)-2.1224258
Nominal p-value0.0
FDR q-value2.857143E-4
FWER p-Value0.001
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LYSMD2na1552.1980.0059No
2MTHFD2na1722.1630.0189No
3PNPT1na3201.9260.0235No
4TRIM14na3631.8770.0333No
5SLAMF7na4931.7740.0379No
6PNPna5461.7420.0463No
7CD274na8361.5740.0412No
8BANK1na9871.5170.0430No
9CASP3na11551.4580.0436No
10IFIT1na14631.3580.0361No
11PTPN1na18651.2530.0231No
12ISG15na19641.2310.0258No
13USP18na22891.1590.0162No
14LATS2na23351.1480.0212No
15NUP93na23561.1430.0274No
16PARP12na25391.1040.0249No
17IL18BPna25741.0980.0302No
18UPP1na25971.0950.0360No
19TRIM25na26631.0820.0395No
20RSAD2na32980.9710.0124No
21SAMHD1na33690.9590.0149No
22PTPN2na35850.9230.0095No
23CASP8na37660.8900.0057No
24HERC6na40810.839-0.0054No
25ISOC1na41050.836-0.0013No
26ARL4Ana41690.8260.0007No
27SRIna42990.808-0.0009No
28PSMA3na44490.785-0.0037No
29LAP3na46500.756-0.0094No
30IFI44Lna49580.713-0.0209No
31PELI1na51110.691-0.0245No
32SAMD9Lna51660.682-0.0230No
33MARCH1na52410.673-0.0226No
34STAT1na54480.645-0.0293No
35CASP7na56060.625-0.0335No
36PSMA2na56690.614-0.0328No
37EIF2AK2na61650.547-0.0553No
38RTP4na62270.536-0.0551No
39FASna62660.532-0.0537No
40JAK2na64380.510-0.0594No
41NOD1na65480.496-0.0620No
42SPPL2Ana66050.492-0.0618No
43NMIna66670.482-0.0619No
44SP110na68040.467-0.0661No
45GCH1na68810.459-0.0671No
46TDRD7na69470.451-0.0677No
47IFIT3na70010.447-0.0676No
48EIF4E3na72420.416-0.0775No
49PSME2na79800.328-0.1142No
50PSMB2na80110.324-0.1137No
51IRF2na80350.322-0.1128No
52SSPNna82140.303-0.1202No
53PLSCR1na83320.290-0.1245No
54IFIT2na85450.266-0.1340No
55TRIM26na85990.261-0.1351No
56RAPGEF6na86730.250-0.1373No
57IFI44na89020.223-0.1479No
58SLC25A28na98310.123-0.1958No
59FGL2na103470.062-0.2225No
60CASP1na103910.060-0.2244No
61NLRC5na107390.020-0.2425No
62ZNFX1na107430.020-0.2425No
63CMPK2na108620.006-0.2487No
64CASP4na109640.000-0.2540No
65ADARna11005-0.004-0.2561No
66NFKB1na11078-0.014-0.2597No
67HIF1Ana11136-0.018-0.2626No
68CFHna11540-0.062-0.2834No
69TOR1Bna11640-0.076-0.2881No
70NCOA3na11832-0.104-0.2975No
71CD40na11978-0.123-0.3043No
72DDX60na11988-0.124-0.3040No
73WARSna12021-0.127-0.3049No
74PLA2G4Ana12476-0.181-0.3276No
75BPGMna12551-0.191-0.3302No
76STAT3na12572-0.194-0.3300No
77OAS3na12687-0.211-0.3347No
78RBCK1na12706-0.214-0.3343No
79RIPK1na12747-0.221-0.3349No
80TRIM21na13344-0.295-0.3644No
81IL7na13349-0.295-0.3627No
82HLA-DQA1na13363-0.297-0.3615No
83IFNAR2na13468-0.310-0.3650No
84MX1na13486-0.314-0.3638No
85MYD88na13595-0.329-0.3674No
86RNF31na13607-0.331-0.3659No
87IFI30na13832-0.356-0.3754No
88CXCL10na13845-0.359-0.3737No
89IL15RAna14050-0.385-0.3820No
90OASLna14184-0.403-0.3864No
91MT2Ana14804-0.498-0.4157No
92IRF7na14815-0.500-0.4130No
93VCAM1na15075-0.525-0.4233No
94PTPN6na15123-0.532-0.4223No
95ITGB7na15259-0.556-0.4259No
96CCL2na15276-0.560-0.4231No
97RIPK2na15343-0.573-0.4229No
98RNF213na15348-0.573-0.4195No
99PFKPna15615-0.609-0.4296No
100IFIH1na15792-0.647-0.4347Yes
101XAF1na15802-0.649-0.4310Yes
102IL15na15840-0.654-0.4288Yes
103PMLna15940-0.675-0.4296Yes
104CDKN1Ana15950-0.678-0.4258Yes
105TRAFD1na15985-0.683-0.4232Yes
106SOCS3na16002-0.686-0.4196Yes
107ST8SIA4na16024-0.691-0.4163Yes
108DDX58na16198-0.731-0.4207Yes
109OAS2na16219-0.737-0.4171Yes
110IRF9na16304-0.759-0.4166Yes
111IFI35na16370-0.774-0.4151Yes
112SOCS1na16397-0.781-0.4115Yes
113UBE2L6na16481-0.806-0.4107Yes
114OGFRna16562-0.826-0.4096Yes
115VAMP5na16588-0.832-0.4056Yes
116LY6Ena16861-0.908-0.4141Yes
117PSME1na16865-0.910-0.4084Yes
118PIM1na17218-1.013-0.4204Yes
119PSMB8na17300-1.042-0.4180Yes
120ARID5Bna17386-1.071-0.4156Yes
121IFITM3na17388-1.072-0.4088Yes
122BATF2na17393-1.073-0.4022Yes
123TAP1na17413-1.084-0.3962Yes
124SECTM1na17427-1.093-0.3899Yes
125NFKBIAna17437-1.096-0.3834Yes
126IFITM2na17476-1.113-0.3782Yes
127C1Rna17490-1.119-0.3718Yes
128TNFAIP3na17494-1.121-0.3647Yes
129PSMB10na17606-1.151-0.3632Yes
130CFBna17623-1.158-0.3566Yes
131TAPBPna17642-1.164-0.3501Yes
132LGALS3BPna17867-1.260-0.3539Yes
133MVPna17873-1.261-0.3460Yes
134ICAM1na17954-1.306-0.3419Yes
135IRF1na18023-1.342-0.3369Yes
136HLA-Gna18076-1.368-0.3309Yes
137IL4Rna18107-1.380-0.3236Yes
138STAT2na18119-1.384-0.3153Yes
139PSMB9na18166-1.407-0.3088Yes
140FPR1na18271-1.474-0.3048Yes
141PDE4Bna18287-1.482-0.2961Yes
142PARP14na18354-1.529-0.2898Yes
143CD74na18418-1.591-0.2829Yes
144NAMPTna18422-1.594-0.2729Yes
145TNFSF10na18488-1.633-0.2658Yes
146ISG20na18505-1.647-0.2561Yes
147HLA-Bna18532-1.675-0.2468Yes
148ST3GAL5na18542-1.683-0.2365Yes
149TXNIPna18572-1.710-0.2271Yes
150APOL6na18574-1.715-0.2162Yes
151B2Mna18622-1.775-0.2073Yes
152PTGS2na18633-1.789-0.1963Yes
153CIITAna18741-1.952-0.1895Yes
154MX2na18748-1.963-0.1772Yes
155HLA-DMAna18758-1.979-0.1650Yes
156IL6na18776-2.020-0.1530Yes
157HLA-DRB1na18792-2.049-0.1407Yes
158BTG1na18836-2.149-0.1292Yes
159BST2na18856-2.210-0.1161Yes
160CMKLR1na18878-2.270-0.1026Yes
161C1Sna18893-2.301-0.0887Yes
162DHX58na18900-2.322-0.0741Yes
163GBP4na18924-2.365-0.0602Yes
164SOD2na18970-2.521-0.0464Yes
165VAMP8na19018-2.739-0.0314Yes
166IFI27na19088-3.055-0.0155Yes
167CXCL11na19118-3.3110.0042Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE