Datasetexpr.class.cls#HYD_versus_CONTROL.class.cls#HYD_versus_CONTROL_repos
Phenotypeclass.cls#HYD_versus_CONTROL_repos
Upregulated in classCONTROL
GeneSetHALLMARK_PI3K_AKT_MTOR_SIGNALING
Enrichment Score (ES)-0.30687523
Normalized Enrichment Score (NES)-1.3183674
Nominal p-value0.044444446
FDR q-value0.07082992
FWER p-Value0.45
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PI3K_AKT_MTOR_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RPTORna5112.3290.0069No
2TRAF2na7292.0910.0258No
3MKNK1na9711.8930.0405No
4AKT1na12971.6910.0479No
5PLCG1na15001.5750.0601No
6TSC2na17541.4680.0681No
7NOD1na17911.4460.0871No
8PAK4na20191.3530.0947No
9GSK3Bna21181.3070.1085No
10DDIT3na23461.2250.1143No
11MAP2K3na26281.1350.1160No
12RAF1na31570.9990.1028No
13HRASna38050.8500.0812No
14FGF17na41300.7840.0756No
15STAT2na42430.7640.0808No
16E2F1na44220.7300.0820No
17MAPKAP1na45520.7010.0854No
18RPS6KA1na45920.6930.0934No
19CAB39na50130.6230.0804No
20PIN1na50320.6210.0884No
21EGFRna55000.5520.0719No
22CDKN1Bna60430.4810.0505No
23ARHGDIAna64910.4170.0332No
24SQSTM1na70120.3590.0111No
25AKT1S1na74440.313-0.0069No
26ECSITna78330.268-0.0233No
27NFKBIBna79810.250-0.0274No
28MKNK2na81090.246-0.0305No
29CAMK4na93460.111-0.0936No
30ACACAna94100.104-0.0954No
31TRIB3na94340.099-0.0951No
32ITPR2na100190.038-0.1252No
33MAPK10na102540.015-0.1372No
34SMAD2na10612-0.018-0.1556No
35AP2M1na10716-0.031-0.1606No
36PDK1na10844-0.045-0.1666No
37ATF1na11096-0.079-0.1785No
38PPP2R1Bna11384-0.099-0.1921No
39TNFRSF1Ana11403-0.101-0.1916No
40MAPK8na11447-0.107-0.1923No
41IRAK4na11729-0.142-0.2050No
42CDKN1Ana11746-0.145-0.2037No
43MYD88na12113-0.189-0.2201No
44SFNna12185-0.198-0.2210No
45CALRna12797-0.257-0.2492No
46PITX2na12814-0.259-0.2463No
47PIKFYVEna12947-0.277-0.2492No
48PIK3R3na13096-0.298-0.2527No
49PTPN11na13303-0.326-0.2588No
50PRKAR2Ana13336-0.327-0.2557No
51CAB39Lna13466-0.348-0.2574No
52PLA2G12Ana13728-0.392-0.2654No
53CSNK2Bna14000-0.416-0.2736No
54UBE2Nna14014-0.419-0.2682No
55MAPK9na14479-0.487-0.2855No
56RIPK1na14682-0.520-0.2885No
57RALBna14845-0.543-0.2892No
58TIAM1na14991-0.561-0.2886No
59PPP1CAna15007-0.563-0.2813No
60SLC2A1na15114-0.583-0.2784No
61MAP3K7na15614-0.671-0.2948No
62GRB2na15845-0.713-0.2966Yes
63DUSP3na15932-0.730-0.2905Yes
64RIT1na16098-0.769-0.2881Yes
65ACTR2na16139-0.775-0.2790Yes
66PFN1na16380-0.828-0.2796Yes
67THEM4na16635-0.883-0.2801Yes
68ARF1na16653-0.887-0.2682Yes
69CFL1na16672-0.891-0.2562Yes
70UBE2D3na16767-0.917-0.2479Yes
71MAPK1na16876-0.948-0.2399Yes
72CDK1na16949-0.970-0.2296Yes
73CDK4na16963-0.974-0.2162Yes
74PRKAA2na16975-0.978-0.2027Yes
75PTENna17107-1.016-0.1949Yes
76YWHABna17172-1.039-0.1832Yes
77CDK2na17319-1.090-0.1751Yes
78PRKAG1na17380-1.114-0.1621Yes
79CLTCna17555-1.181-0.1542Yes
80EIF4Ena17756-1.264-0.1464Yes
81HSP90B1na18044-1.410-0.1411Yes
82NGFna18094-1.437-0.1229Yes
83TBK1na18386-1.630-0.1145Yes
84RPS6KA3na18422-1.654-0.0925Yes
85ACTR3na18460-1.682-0.0701Yes
86NCK1na18624-1.812-0.0525Yes
87ARPC3na18626-1.815-0.0263Yes
88RAC1na18642-1.836-0.0006Yes
89CXCR4na18827-2.0500.0194Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PI3K_AKT_MTOR_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PI3K_AKT_MTOR_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PI3K_AKT_MTOR_SIGNALING