# Supplementary Material (ESI) for Chemical Communications # This journal is © The Royal Society of Chemistry 2005 data_global _journal_name_full Chem.Commun. _journal_coden_Cambridge 0182 _publ_contact_author_name 'Jerry L. Atwood' _publ_contact_author_address ; Chemistry University of Missouri - Columbia 125 Chemistry Columbia MO UNITED STATES OF AMERICA ; _publ_contact_author_email ATWOODJ@MISSOURI.EDU _publ_section_title ; Crystal engineering of nonporous organic solids for methane sorption ; loop_ _publ_author_name 'J. L. Atwood' 'Leonard J. Barbour' 'Praveen Kumar Thallapally' 'Trevor B. Wirsig' data_D:\X-Ray\_Praveen\Pentyl\pentyl.CIF _database_code_depnum_ccdc_archive 'CCDC 273602' _audit_creation_method SHELXL-97 _chemical_name_systematic ; ? ; _chemical_name_common Pentyl _chemical_melting_point ? _chemical_formula_moiety ? _chemical_formula_sum 'C48 H64 O4' _chemical_formula_weight 704.99 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' _symmetry_cell_setting tetragonal _symmetry_space_group_name_H-M P4/n loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-y+1/2, x, z' '-x+1/2, -y+1/2, z' 'y, -x+1/2, z' '-x, -y, -z' 'y-1/2, -x, -z' 'x-1/2, y-1/2, -z' '-y, x-1/2, -z' _cell_length_a 12.717(3) _cell_length_b 12.717(3) _cell_length_c 13.457(6) _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_volume 2176.2(11) _cell_formula_units_Z 2 _cell_measurement_temperature 173(2) _cell_measurement_reflns_used ? _cell_measurement_theta_min ? _cell_measurement_theta_max ? _exptl_crystal_description prism _exptl_crystal_colour colorless _exptl_crystal_size_max 0.30 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.15 _exptl_crystal_density_meas ? _exptl_crystal_density_diffrn 1.076 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 768 _exptl_absorpt_coefficient_mu 0.066 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_correction_T_min 0.9804 _exptl_absorpt_correction_T_max 0.9901 _exptl_absorpt_process_details ? _exptl_special_details ; ? ; _diffrn_ambient_temperature 173(2) _diffrn_radiation_wavelength 0.71073 _diffrn_radiation_type MoK\a _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_monochromator graphite _diffrn_measurement_device_type ? _diffrn_measurement_method ? _diffrn_detector_area_resol_mean ? _diffrn_standards_number ? _diffrn_standards_interval_count ? _diffrn_standards_interval_time ? _diffrn_standards_decay_% ? _diffrn_reflns_number 14207 _diffrn_reflns_av_R_equivalents 0.0860 _diffrn_reflns_av_sigmaI/netI 0.0643 _diffrn_reflns_limit_h_min -16 _diffrn_reflns_limit_h_max 16 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_theta_min 1.51 _diffrn_reflns_theta_max 27.13 _reflns_number_total 2398 _reflns_number_gt 1488 _reflns_threshold_expression >2sigma(I) _computing_data_collection SMART _computing_cell_refinement SAINT _computing_data_reduction SAINT _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_molecular_graphics X-Seed _computing_publication_material SHELX-97 _refine_special_details ; Refinement of F^2^ against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F^2^, conventional R-factors R are based on F, with F set to zero for negative F^2^. The threshold expression of F^2^ > 2sigma(F^2^) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F^2^ are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. ; _refine_ls_structure_factor_coef Fsqd _refine_ls_matrix_type full _refine_ls_weighting_scheme calc _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1037P)^2^+1.6329P] where P=(Fo^2^+2Fc^2^)/3' _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _atom_sites_solution_hydrogens geom _refine_ls_hydrogen_treatment mixed _refine_ls_extinction_method none _refine_ls_extinction_coef ? _refine_ls_number_reflns 2398 _refine_ls_number_parameters 150 _refine_ls_number_restraints 2 _refine_ls_R_factor_all 0.1325 _refine_ls_R_factor_gt 0.0823 _refine_ls_wR_factor_ref 0.2251 _refine_ls_wR_factor_gt 0.2016 _refine_ls_goodness_of_fit_ref 1.072 _refine_ls_restrained_S_all 1.072 _refine_ls_shift/su_max 0.006 _refine_ls_shift/su_mean 0.000 loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group O1 O 0.18459(15) 0.11542(16) 0.55149(15) 0.0282(5) Uani 1 1 d . . . C6 C 0.0574(2) 0.0843(2) 0.4208(2) 0.0228(6) Uani 1 1 d . . . C2 C 0.2274(2) -0.00475(19) 0.4213(2) 0.0216(6) Uani 1 1 d . . . C7 C -0.0204(2) 0.1631(2) 0.4637(2) 0.0250(6) Uani 1 1 d . . . H7A H -0.0929 0.1393 0.4492 0.030 Uiso 1 1 calc R . . H7B H -0.0119 0.1657 0.5368 0.030 Uiso 1 1 calc R . . C1 C 0.1557(2) 0.06601(19) 0.4638(2) 0.0223(6) Uani 1 1 d . . . C3 C 0.1976(2) -0.0572(2) 0.3364(2) 0.0249(7) Uani 1 1 d . . . H3 H 0.2457 -0.1058 0.3079 0.030 Uiso 1 1 calc R . . C5 C 0.0323(2) 0.0298(2) 0.3346(2) 0.0246(7) Uani 1 1 d . . . H5 H -0.0341 0.0423 0.3044 0.030 Uiso 1 1 calc R . . C4 C 0.1004(2) -0.0430(2) 0.2899(2) 0.0267(7) Uani 1 1 d . A . C8 C 0.0721(2) -0.1028(3) 0.1955(3) 0.0374(8) Uani 1 1 d . . . C9 C 0.0748(5) -0.2220(4) 0.2203(5) 0.0460(16) Uani 0.687(8) 1 d P A 1 H9A H 0.1446 -0.2408 0.2456 0.069 Uiso 0.687(8) 1 calc PR A 1 H9B H 0.0599 -0.2627 0.1601 0.069 Uiso 0.687(8) 1 calc PR A 1 H9C H 0.0216 -0.2377 0.2709 0.069 Uiso 0.687(8) 1 calc PR A 1 C12 C 0.1778(4) 0.0334(4) 0.0929(3) 0.0783(16) Uani 0.687(8) 1 d PD A 1 H12A H 0.2327 0.0388 0.0420 0.117 Uiso 0.687(8) 1 calc PR A 1 H12B H 0.2010 0.0693 0.1535 0.117 Uiso 0.687(8) 1 calc PR A 1 H12C H 0.1130 0.0662 0.0684 0.117 Uiso 0.687(8) 1 calc PR A 1 C11 C 0.1571(4) -0.0817(4) 0.1158(4) 0.0450(16) Uani 0.687(8) 1 d PD A 1 H11A H 0.2238 -0.1142 0.1380 0.054 Uiso 0.687(8) 1 calc PR A 1 H11B H 0.1357 -0.1172 0.0535 0.054 Uiso 0.687(8) 1 calc PR A 1 C10 C -0.0363(5) -0.0746(6) 0.1557(5) 0.0521(18) Uani 0.687(8) 1 d P A 1 H10A H -0.0503 -0.1152 0.0953 0.078 Uiso 0.687(8) 1 calc PR A 1 H10B H -0.0387 0.0007 0.1403 0.078 Uiso 0.687(8) 1 calc PR A 1 H10C H -0.0896 -0.0910 0.2060 0.078 Uiso 0.687(8) 1 calc PR A 1 C11' C 0.0737(10) -0.0255(12) 0.1062(10) 0.067(5) Uani 0.313(8) 1 d PD A 2 H11C H 0.0586 -0.0654 0.0447 0.080 Uiso 0.313(8) 1 calc PR A 2 H11D H 0.0167 0.0266 0.1151 0.080 Uiso 0.313(8) 1 calc PR A 2 C10' C -0.0454(11) -0.1397(15) 0.1965(14) 0.071(5) Uani 0.313(8) 1 d P A 2 H10D H -0.0910 -0.0799 0.2123 0.106 Uiso 0.313(8) 1 calc PR A 2 H10E H -0.0546 -0.1947 0.2467 0.106 Uiso 0.313(8) 1 calc PR A 2 H10F H -0.0642 -0.1676 0.1309 0.106 Uiso 0.313(8) 1 calc PR A 2 C9' C 0.1323(18) -0.2008(14) 0.1718(14) 0.089(7) Uani 0.313(8) 1 d P A 2 H9'1 H 0.1059 -0.2309 0.1096 0.133 Uiso 0.313(8) 1 calc PR A 2 H9'2 H 0.1232 -0.2518 0.2257 0.133 Uiso 0.313(8) 1 calc PR A 2 H9'3 H 0.2070 -0.1838 0.1646 0.133 Uiso 0.313(8) 1 calc PR A 2 C12' C 0.1778(4) 0.0334(4) 0.0929(3) 0.0783(16) Uani 0.31 1 d PD A 2 H12D H 0.1755 0.0742 0.0312 0.117 Uiso 0.313(8) 1 calc PR A 2 H12E H 0.2357 -0.0173 0.0897 0.117 Uiso 0.313(8) 1 calc PR A 2 H12F H 0.1887 0.0809 0.1493 0.117 Uiso 0.313(8) 1 calc PR A 2 H1 H 0.156(4) 0.170(4) 0.565(4) 0.13(2) Uiso 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0258(11) 0.0259(11) 0.0328(12) 0.0008(9) -0.0023(8) 0.0005(9) C6 0.0188(13) 0.0157(13) 0.0340(16) 0.0076(11) 0.0077(11) 0.0012(10) C2 0.0192(13) 0.0160(13) 0.0297(16) 0.0075(11) 0.0012(11) -0.0009(10) C7 0.0157(13) 0.0210(13) 0.0382(17) 0.0036(12) 0.0047(12) 0.0010(10) C1 0.0230(13) 0.0150(12) 0.0290(15) 0.0030(11) 0.0029(11) -0.0019(10) C3 0.0184(13) 0.0186(13) 0.0377(18) 0.0011(12) 0.0030(12) 0.0014(10) C5 0.0161(13) 0.0211(13) 0.0367(17) 0.0045(12) -0.0033(11) -0.0014(10) C4 0.0219(14) 0.0215(14) 0.0367(17) 0.0004(12) 0.0007(12) -0.0007(11) C8 0.0292(16) 0.0359(17) 0.047(2) -0.0087(15) -0.0060(14) 0.0031(14) C9 0.048(3) 0.026(3) 0.064(4) -0.016(3) -0.010(3) -0.009(2) C12 0.093(4) 0.085(4) 0.057(3) 0.015(3) 0.007(3) -0.025(3) C11 0.043(3) 0.050(3) 0.042(3) -0.009(2) -0.001(2) 0.006(2) C10 0.040(3) 0.057(4) 0.059(4) -0.026(3) -0.025(3) 0.017(3) C11' 0.058(9) 0.091(11) 0.051(8) -0.018(7) -0.011(6) -0.001(8) C10' 0.055(8) 0.062(10) 0.096(13) -0.039(9) -0.016(8) -0.004(8) C9' 0.120(17) 0.070(12) 0.076(13) -0.037(10) -0.046(12) 0.032(11) C12' 0.093(4) 0.085(4) 0.057(3) 0.015(3) 0.007(3) -0.025(3) _geom_special_details ; All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. ; loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag O1 C1 1.386(3) . ? C6 C5 1.390(4) . ? C6 C1 1.397(4) . ? C6 C7 1.521(4) . ? C2 C3 1.377(4) . ? C2 C1 1.403(4) . ? C2 C7 1.517(4) 2 ? C7 C2 1.517(4) 4 ? C3 C4 1.397(4) . ? C5 C4 1.402(4) . ? C4 C8 1.523(4) . ? C8 C9' 1.497(16) . ? C8 C10 1.521(6) . ? C8 C9 1.553(6) . ? C8 C11 1.547(6) . ? C8 C11' 1.553(15) . ? C8 C10' 1.567(15) . ? C12 C11 1.518(7) . ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag C5 C6 C1 117.9(2) . . ? C5 C6 C7 119.8(2) . . ? C1 C6 C7 122.3(3) . . ? C3 C2 C1 118.0(2) . . ? C3 C2 C7 120.1(2) . 2 ? C1 C2 C7 121.8(3) . 2 ? C2 C7 C6 112.1(2) 4 . ? O1 C1 C6 120.9(2) . . ? O1 C1 C2 117.7(2) . . ? C6 C1 C2 121.3(3) . . ? C2 C3 C4 123.6(2) . . ? C6 C5 C4 123.1(2) . . ? C3 C4 C5 116.1(3) . . ? C3 C4 C8 121.2(2) . . ? C5 C4 C8 122.7(2) . . ? C9' C8 C10 125.8(7) . . ? C9' C8 C4 118.2(7) . . ? C10 C8 C4 112.9(3) . . ? C9' C8 C9 38.9(9) . . ? C10 C8 C9 109.0(4) . . ? C4 C8 C9 107.7(3) . . ? C9' C8 C11 68.9(10) . . ? C10 C8 C11 110.3(4) . . ? C4 C8 C11 109.1(3) . . ? C9 C8 C11 107.7(4) . . ? C9' C8 C11' 110.8(10) . . ? C10 C8 C11' 65.8(6) . . ? C4 C8 C11' 109.0(5) . . ? C9 C8 C11' 141.6(6) . . ? C11 C8 C11' 49.0(5) . . ? C9' C8 C10' 103.9(10) . . ? C10 C8 C10' 37.8(7) . . ? C4 C8 C10' 111.6(6) . . ? C9 C8 C10' 74.1(8) . . ? C11 C8 C10' 136.4(8) . . ? C11' C8 C10' 102.0(10) . . ? C12 C11 C8 115.4(4) . . ? _diffrn_measured_fraction_theta_max 0.987 _diffrn_reflns_theta_full 27.13 _diffrn_measured_fraction_theta_full 0.987 _refine_diff_density_max 0.261 _refine_diff_density_min -0.232 _refine_diff_density_rms 0.058