# Electronic Supplementary Material (ESI) for Chemical Communications # This journal is © The Royal Society of Chemistry 2011 data_global #TrackingRef 'Cif_complex1a.cif' _journal_name_full Chem.Commun. _journal_coden_Cambridge 0182 _journal_volume ? _journal_page_first ? _journal_year ? _publ_contact_author_name 'Shih-Sheng Sun' _publ_contact_author_email SSSUN@CHEM.SINICA.EDU.TW _publ_section_title ; Dynamic Self-Assembly of Molecular Capsule via Solvent Polarity Controlled Reversible Binding of Nitrate Anion with C3 Symmetric tripodal Receptor ; _publ_section_exptl_refinement ; The disordered solvent was treated as a diffuse contribution using the program SQUEEZE (A. Spek, Platon Library). The crystal diffracted poorly, which led to a high R factor of 0.1953 for complex 1a. ; loop_ _publ_author_name 'Ashutosh Sharan Singh' 'Shih Sheng Sun' data_Complex1a.CIF _database_code_depnum_ccdc_archive 'CCDC 777052' #TrackingRef 'Cif_complex1a.cif' _audit_creation_method SHELXL-97 _chemical_name_systematic ; ? ; _chemical_name_common ? _chemical_melting_point ? _chemical_formula_moiety 'C48 H49 N5 O12' _chemical_formula_sum 'C48 H49 N5 O12' _chemical_formula_weight 887.92 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' _symmetry_cell_setting trigonal _symmetry_space_group_name_H-M 'P -3' _symmetry_space_group_name_Hall '-P 3' loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-y, x-y, z' '-x+y, -x, z' '-x, -y, -z' 'y, -x+y, -z' 'x-y, x, -z' _cell_length_a 15.7160(5) _cell_length_b 15.7160(5) _cell_length_c 11.4490(5) _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 120.00 _cell_volume 2448.96(15) _cell_formula_units_Z 2 _cell_measurement_temperature 200(2) _cell_measurement_reflns_used 8882 _cell_measurement_theta_min 2.037 _cell_measurement_theta_max 25.028 _exptl_crystal_description prism _exptl_crystal_colour colorless _exptl_crystal_size_max 0.4 _exptl_crystal_size_mid 0.08 _exptl_crystal_size_min 0.04 _exptl_crystal_density_meas ? _exptl_crystal_density_diffrn 1.204 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 936 _exptl_absorpt_coefficient_mu 0.087 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_correction_T_min 0.8764 _exptl_absorpt_correction_T_max 1.1152 _exptl_absorpt_process_details ; ? ; _exptl_special_details ; ? ; _diffrn_ambient_temperature 200(2) _diffrn_radiation_wavelength 0.71073 _diffrn_radiation_type MoK\a _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_monochromator graphite _diffrn_measurement_device_type KappaCCD _diffrn_measurement_method 'CCD rotation images, thick slices' _diffrn_detector_area_resol_mean 9 _diffrn_standards_number ? _diffrn_standards_interval_count ? _diffrn_standards_interval_time ? _diffrn_standards_decay_% ? _diffrn_reflns_number 13438 _diffrn_reflns_av_R_equivalents 0.1221 _diffrn_reflns_av_sigmaI/netI 0.1212 _diffrn_reflns_limit_h_min -18 _diffrn_reflns_limit_h_max 13 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_k_max 18 _diffrn_reflns_limit_l_min -13 _diffrn_reflns_limit_l_max 13 _diffrn_reflns_theta_min 2.32 _diffrn_reflns_theta_max 25.01 _reflns_number_total 2845 _reflns_number_gt 1619 _reflns_threshold_expression >2sigma(I) _computing_data_collection 'Collect (Nonius BV, 1997-2000)' _computing_cell_refinement 'HKL Scalepack (Otwinowski & Minor 1997)' _computing_data_reduction 'HKL Denzo and Scalepack' _computing_structure_solution 'SIR92 (Giacovazzo et al, 1993)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_molecular_graphics 'Ortep-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX publication routines (Farrugia, 1999)' _refine_special_details ; Refinement of F^2^ against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F^2^, conventional R-factors R are based on F, with F set to zero for negative F^2^. The threshold expression of F^2^ > 2sigma(F^2^) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F^2^ are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. ; _refine_ls_structure_factor_coef Fsqd _refine_ls_matrix_type full _refine_ls_weighting_scheme calc _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.2000P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _atom_sites_solution_hydrogens geom _refine_ls_hydrogen_treatment fixed _refine_ls_extinction_method none _refine_ls_extinction_coef ? _refine_ls_number_reflns 2845 _refine_ls_number_parameters 196 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.2508 _refine_ls_R_factor_gt 0.1953 _refine_ls_wR_factor_ref 0.5372 _refine_ls_wR_factor_gt 0.5241 _refine_ls_goodness_of_fit_ref 1.837 _refine_ls_restrained_S_all 1.837 _refine_ls_shift/su_max 0.072 _refine_ls_shift/su_mean 0.021 loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group C1 C 0.7736(8) 0.3948(8) 0.7973(9) 0.046(3) Uani 1 1 d . . . H1A H 0.7836 0.3743 0.8754 0.055 Uiso 1 1 calc R . . H1B H 0.7920 0.4649 0.8016 0.055 Uiso 1 1 calc R . . C2 C 0.8390(8) 0.3822(9) 0.7079(10) 0.055(3) Uani 1 1 d . . . H2A H 0.9094 0.4249 0.7272 0.066 Uiso 1 1 calc R . . H2B H 0.8240 0.3131 0.7048 0.066 Uiso 1 1 calc R . . C3 C 0.8551(8) 0.3985(8) 0.4977(9) 0.045(3) Uani 1 1 d . . . C4 C 0.9271(8) 0.3702(9) 0.4990(10) 0.053(3) Uani 1 1 d . . . H4 H 0.9481 0.3553 0.5700 0.063 Uiso 1 1 calc R . . C5 C 0.9658(8) 0.3650(8) 0.3928(9) 0.043(3) Uani 1 1 d . . . H5 H 1.0180 0.3511 0.3909 0.052 Uiso 1 1 calc R . . C6 C 0.9303(7) 0.3795(8) 0.2906(9) 0.040(3) Uani 1 1 d . . . C7 C 0.8584(7) 0.4070(7) 0.2858(9) 0.043(3) Uani 1 1 d . . . H7 H 0.8365 0.4188 0.2135 0.051 Uiso 1 1 calc R . . C8 C 0.8198(7) 0.4163(7) 0.3930(9) 0.042(3) Uani 1 1 d . . . H8 H 0.7705 0.4345 0.3945 0.051 Uiso 1 1 calc R . . C9 C 0.9754(9) 0.3705(8) 0.1781(11) 0.055(3) Uani 1 1 d . . . C10 C 0.9485(8) 0.3215(8) -0.0262(8) 0.042(3) Uani 1 1 d . . . C11 C 1.0417(8) 0.3822(8) -0.0818(10) 0.050(3) Uani 1 1 d . . . H11 H 1.0876 0.4425 -0.0460 0.060 Uiso 1 1 calc R . . C12 C 1.0660(8) 0.3565(9) -0.1829(9) 0.051(3) Uani 1 1 d . . . H12 H 1.1296 0.3972 -0.2149 0.061 Uiso 1 1 calc R . . C13 C 0.9999(9) 0.2715(9) -0.2417(10) 0.056(3) Uani 1 1 d . . . C15 C 0.9046(9) 0.2132(9) -0.1937(11) 0.063(4) Uani 1 1 d . . . H15 H 0.8569 0.1569 -0.2348 0.076 Uiso 1 1 calc R . . C16 C 0.8809(8) 0.2374(7) -0.0888(10) 0.050(3) Uani 1 1 d . . . H16 H 0.8172 0.1966 -0.0573 0.060 Uiso 1 1 calc R . . C17 C 1.1144(12) 0.2883(14) -0.3897(17) 0.116(7) Uani 1 1 d . . . H17A H 1.1150 0.2579 -0.4642 0.175 Uiso 1 1 calc R . . H17B H 1.1571 0.2803 -0.3337 0.175 Uiso 1 1 calc R . . H17C H 1.1384 0.3584 -0.4017 0.175 Uiso 1 1 calc R . . N1 N 0.6667 0.3333 0.7623(11) 0.035(3) Uani 1 3 d S . . H1' H 0.6667 0.3333 0.6664 0.042 Uiso 1 3 d SR . . N2 N 0.9205(6) 0.3451(6) 0.0805(7) 0.041(2) Uani 1 1 d . . . H2 H 0.8636 0.3431 0.0835 0.050 Uiso 1 1 calc R . . N3 N 0.6667 0.3333 0.0706(10) 0.027(3) Uani 1 3 d S . . O1 O 0.8149(5) 0.4117(6) 0.5966(6) 0.053(2) Uani 1 1 d . . . O2 O 1.0618(6) 0.3856(6) 0.1760(7) 0.059(2) Uani 1 1 d . . . O3 O 1.0176(7) 0.2425(7) -0.3455(9) 0.084(3) Uani 1 1 d . . . O4 O 0.7023(5) 0.2781(5) 0.0693(6) 0.046(2) Uani 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 C1 0.051(7) 0.053(7) 0.038(6) 0.009(5) 0.012(5) 0.029(6) C2 0.036(6) 0.060(7) 0.063(8) 0.009(6) -0.003(6) 0.018(6) C3 0.048(6) 0.064(7) 0.036(6) 0.005(5) 0.013(5) 0.037(6) C4 0.042(6) 0.071(8) 0.042(6) 0.011(6) 0.003(5) 0.026(6) C5 0.039(6) 0.051(7) 0.044(6) 0.005(5) 0.011(5) 0.025(5) C6 0.042(6) 0.047(6) 0.033(6) -0.008(5) 0.004(5) 0.023(5) C7 0.036(6) 0.048(6) 0.042(6) 0.004(5) 0.005(5) 0.019(5) C8 0.041(6) 0.047(6) 0.047(6) -0.006(5) 0.001(5) 0.028(5) C9 0.043(7) 0.051(7) 0.069(8) 0.006(6) 0.005(6) 0.023(6) C10 0.041(6) 0.062(7) 0.032(5) -0.006(5) -0.009(5) 0.032(6) C11 0.034(6) 0.039(6) 0.062(7) 0.004(6) -0.001(6) 0.006(5) C12 0.047(7) 0.057(7) 0.038(6) 0.005(6) 0.007(5) 0.018(6) C13 0.069(8) 0.062(8) 0.049(7) -0.013(6) -0.001(6) 0.042(7) C15 0.048(7) 0.051(7) 0.070(9) -0.023(6) 0.008(6) 0.009(6) C16 0.037(6) 0.033(6) 0.066(8) 0.021(6) 0.012(6) 0.006(5) C17 0.081(12) 0.156(18) 0.118(14) 0.041(13) 0.050(11) 0.064(12) N1 0.039(5) 0.039(5) 0.028(7) 0.000 0.000 0.019(3) N2 0.039(5) 0.047(5) 0.032(5) -0.012(4) -0.002(4) 0.017(4) N3 0.032(5) 0.032(5) 0.016(6) 0.000 0.000 0.016(2) O1 0.045(5) 0.081(6) 0.042(4) -0.004(4) -0.002(4) 0.039(4) O2 0.040(5) 0.087(6) 0.052(5) -0.002(4) -0.005(4) 0.032(4) O3 0.071(6) 0.100(7) 0.087(7) -0.023(6) 0.020(5) 0.047(6) O4 0.042(4) 0.049(4) 0.051(5) -0.004(4) -0.003(3) 0.025(4) _geom_special_details ; All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. ; loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag C1 N1 1.515(11) . ? C1 C2 1.532(15) . ? C1 H1A 0.9900 . ? C1 H1B 0.9900 . ? C2 O1 1.468(13) . ? C2 H2A 0.9900 . ? C2 H2B 0.9900 . ? C3 O1 1.362(12) . ? C3 C4 1.407(15) . ? C3 C8 1.407(15) . ? C4 C5 1.381(15) . ? C4 H4 0.9500 . ? C5 C6 1.363(14) . ? C5 H5 0.9500 . ? C6 C7 1.399(14) . ? C6 C9 1.511(15) . ? C7 C8 1.409(14) . ? C7 H7 0.9500 . ? C8 H8 0.9500 . ? C9 O2 1.256(13) . ? C9 N2 1.344(14) . ? C10 C16 1.408(15) . ? C10 N2 1.410(12) . ? C10 C11 1.436(15) . ? C11 C12 1.343(15) . ? C11 H11 0.9500 . ? C12 C13 1.388(16) . ? C12 H12 0.9500 . ? C13 O3 1.351(14) . ? C13 C15 1.418(17) . ? C15 C16 1.368(15) . ? C15 H15 0.9500 . ? C16 H16 0.9500 . ? C17 O3 1.413(17) . ? C17 H17A 0.9800 . ? C17 H17B 0.9800 . ? C17 H17C 0.9800 . ? N1 C1 1.515(11) 3_665 ? N1 C1 1.515(11) 2_655 ? N1 H1' 1.0984 . ? N2 H2 0.8800 . ? N3 O4 1.246(7) . ? N3 O4 1.246(7) 2_655 ? N3 O4 1.246(7) 3_665 ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag N1 C1 C2 110.1(9) . . ? N1 C1 H1A 109.6 . . ? C2 C1 H1A 109.6 . . ? N1 C1 H1B 109.6 . . ? C2 C1 H1B 109.7 . . ? H1A C1 H1B 108.2 . . ? O1 C2 C1 104.1(8) . . ? O1 C2 H2A 110.9 . . ? C1 C2 H2A 110.9 . . ? O1 C2 H2B 110.9 . . ? C1 C2 H2B 111.0 . . ? H2A C2 H2B 109.0 . . ? O1 C3 C4 123.1(10) . . ? O1 C3 C8 114.8(9) . . ? C4 C3 C8 122.1(9) . . ? C5 C4 C3 117.2(10) . . ? C5 C4 H4 121.4 . . ? C3 C4 H4 121.4 . . ? C6 C5 C4 121.1(10) . . ? C6 C5 H5 119.5 . . ? C4 C5 H5 119.4 . . ? C5 C6 C7 123.1(9) . . ? C5 C6 C9 117.8(10) . . ? C7 C6 C9 119.0(9) . . ? C8 C7 C6 117.1(10) . . ? C8 C7 H7 121.5 . . ? C6 C7 H7 121.5 . . ? C7 C8 C3 119.2(9) . . ? C7 C8 H8 120.4 . . ? C3 C8 H8 120.4 . . ? O2 C9 N2 120.8(11) . . ? O2 C9 C6 120.8(11) . . ? N2 C9 C6 118.4(10) . . ? C16 C10 N2 119.9(10) . . ? C16 C10 C11 116.0(9) . . ? N2 C10 C11 123.9(10) . . ? C12 C11 C10 122.1(10) . . ? C12 C11 H11 118.9 . . ? C10 C11 H11 119.0 . . ? C11 C12 C13 121.2(11) . . ? C11 C12 H12 119.4 . . ? C13 C12 H12 119.4 . . ? O3 C13 C12 124.7(11) . . ? O3 C13 C15 116.8(11) . . ? C12 C13 C15 118.4(10) . . ? C16 C15 C13 120.4(11) . . ? C16 C15 H15 119.8 . . ? C13 C15 H15 119.8 . . ? C15 C16 C10 121.7(10) . . ? C15 C16 H16 119.2 . . ? C10 C16 H16 119.2 . . ? O3 C17 H17A 109.5 . . ? O3 C17 H17B 109.5 . . ? H17A C17 H17B 109.5 . . ? O3 C17 H17C 109.5 . . ? H17A C17 H17C 109.5 . . ? H17B C17 H17C 109.5 . . ? C1 N1 C1 113.3(5) 3_665 . ? C1 N1 C1 113.3(5) 3_665 2_655 ? C1 N1 C1 113.3(5) . 2_655 ? C1 N1 H1' 105.3 3_665 . ? C1 N1 H1' 105.3 . . ? C1 N1 H1' 105.3 2_655 . ? C9 N2 C10 124.1(9) . . ? C9 N2 H2 117.9 . . ? C10 N2 H2 118.0 . . ? O4 N3 O4 119.98(3) . 2_655 ? O4 N3 O4 119.98(3) . 3_665 ? O4 N3 O4 119.98(3) 2_655 3_665 ? C3 O1 C2 117.5(8) . . ? C13 O3 C17 119.6(12) . . ? _diffrn_measured_fraction_theta_max 0.983 _diffrn_reflns_theta_full 25.01 _diffrn_measured_fraction_theta_full 0.983 _refine_diff_density_max 0.835 _refine_diff_density_min -0.664 _refine_diff_density_rms 0.142