# Supplementary Material (ESI) for Dalton Transactions # This journal is (c) The Royal Society of Chemistry 2009 data_global _journal_coden_Cambridge 222 loop_ _publ_author_name 'John Spencer' 'Samantha Callear' 'Angela Casini' 'Paul Joseph Dyson' 'Michael B. Hursthouse' 'Michel Pfeffer' 'Rajendra P. Rathnam' 'Santosh K. Velhanda' 'Olivier Zava' _publ_contact_author_name 'John Spencer' _publ_contact_author_email J.SPENCER@GRE.AC.UK _publ_section_title ; Excellent correlation between cathepsin B inhibition and cytotoxicity for a series of palladacycles ; # Attachment 'Pdcycle_cif.txt' data_5b _database_code_depnum_ccdc_archive 'CCDC 736873' _audit_creation_method SHELXL-97 _chemical_name_systematic ; ? ; _chemical_name_common ? _chemical_melting_point ? _chemical_formula_moiety ? _chemical_formula_sum 'C14 H21 Cl N3 P Pd S' _chemical_formula_weight 436.22 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pd Pd -0.9988 1.0072 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' _symmetry_cell_setting monoclinic _symmetry_space_group_name_H-M P21/c loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' _cell_length_a 6.2066(3) _cell_length_b 17.1960(8) _cell_length_c 15.1712(6) _cell_angle_alpha 90.00 _cell_angle_beta 90.442(2) _cell_angle_gamma 90.00 _cell_volume 1619.15(13) _cell_formula_units_Z 4 _cell_measurement_temperature 120(2) _cell_measurement_reflns_used 16828 _cell_measurement_theta_min 2.91 _cell_measurement_theta_max 27.48 _exptl_crystal_description plate _exptl_crystal_colour colourless _exptl_crystal_size_max 0.09 _exptl_crystal_size_mid 0.07 _exptl_crystal_size_min 0.01 _exptl_crystal_density_meas ? _exptl_crystal_density_diffrn 1.789 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 880 _exptl_absorpt_coefficient_mu 1.535 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_correction_T_min 0.8742 _exptl_absorpt_correction_T_max 0.9848 _exptl_absorpt_process_details 'SADABS 2007/2 (Sheldrick, G.M., 2007)' _exptl_special_details ; ? ; _diffrn_ambient_temperature 120(2) _diffrn_radiation_wavelength 0.71073 _diffrn_radiation_type MoK\a _diffrn_radiation_source 'Bruker-Nonius FR591 rotating anode' _diffrn_radiation_monochromator '10cm confocal mirrors' _diffrn_measurement_device_type 'Bruker-Nonius APEX II CCD camera on \k-goniostat' _diffrn_measurement_method '\f & \w scans' _diffrn_detector_area_resol_mean '4096x4096pixels / 62x62mm' _diffrn_standards_number ? _diffrn_standards_interval_count ? _diffrn_standards_interval_time ? _diffrn_standards_decay_% ? _diffrn_reflns_number 15933 _diffrn_reflns_av_R_equivalents 0.1108 _diffrn_reflns_av_sigmaI/netI 0.0836 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_k_min -20 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_limit_l_max 17 _diffrn_reflns_theta_min 2.94 _diffrn_reflns_theta_max 25.00 _reflns_number_total 2837 _reflns_number_gt 2098 _reflns_threshold_expression >2\s(I) _computing_data_collection 'COLLECT (Hooft, R.W.W., 1998)' _computing_cell_refinement 'DENZO (Otwinowski & Minor, 1997) & COLLECT (Hooft, R.W.W., 1998)' #Although determined using DirAx, the cell is refined in the HKL #package during data reduction _computing_data_reduction 'DENZO (Otwinowski & Minor, 1997) & COLLECT (Hooft, R.W.W., 1998)' _computing_structure_solution 'SHELXS97 (G. M. Sheldrick, 1990)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_molecular_graphics ? _computing_publication_material ? _refine_special_details ; Refinement of F^2^ against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F^2^, conventional R-factors R are based on F, with F set to zero for negative F^2^. The threshold expression of F^2^ > 2\s(F^2^) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F^2^ are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. ; _refine_ls_structure_factor_coef Fsqd _refine_ls_matrix_type full _refine_ls_weighting_scheme calc _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0000P)^2^+28.3993P] where P=(Fo^2^+2Fc^2^)/3' _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _atom_sites_solution_hydrogens geom _refine_ls_hydrogen_treatment constr _refine_ls_extinction_method none _refine_ls_extinction_coef ? _refine_ls_number_reflns 2837 _refine_ls_number_parameters 191 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.1154 _refine_ls_R_factor_gt 0.0780 _refine_ls_wR_factor_ref 0.1527 _refine_ls_wR_factor_gt 0.1363 _refine_ls_goodness_of_fit_ref 1.168 _refine_ls_restrained_S_all 1.168 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group C1 C 0.2540(15) 0.6738(5) 0.1832(6) 0.016(2) Uani 1 1 d . . . C2 C 0.2038(17) 0.6916(6) 0.2687(6) 0.024(2) Uani 1 1 d . . . H2 H 0.0661 0.7123 0.2822 0.028 Uiso 1 1 calc R . . C3 C 0.3542(18) 0.6794(6) 0.3355(7) 0.029(3) Uani 1 1 d . . . H3 H 0.3219 0.6946 0.3942 0.035 Uiso 1 1 calc R . . C4 C 0.547(2) 0.6458(7) 0.3177(8) 0.038(3) Uani 1 1 d . . . H4 H 0.6484 0.6388 0.3643 0.046 Uiso 1 1 calc R . . C5 C 0.6006(18) 0.6217(6) 0.2343(9) 0.034(3) Uani 1 1 d . . . H5 H 0.7331 0.5959 0.2232 0.041 Uiso 1 1 calc R . . C6 C 0.4506(17) 0.6365(6) 0.1655(7) 0.024(2) Uani 1 1 d . . . C7 C 0.4993(17) 0.6122(6) 0.0735(7) 0.028(3) Uani 1 1 d . . . H7A H 0.6055 0.5692 0.0734 0.034 Uiso 1 1 calc R . . H7B H 0.5586 0.6563 0.0395 0.034 Uiso 1 1 calc R . . C8 C 0.299(2) 0.5902(7) -0.0898(6) 0.033(3) Uani 1 1 d . . . H8A H 0.4238 0.5581 -0.1051 0.049 Uiso 1 1 calc R . . H8B H 0.3298 0.6448 -0.1032 0.049 Uiso 1 1 calc R . . H8C H 0.1733 0.5731 -0.1243 0.049 Uiso 1 1 calc R . . C9 C 0.0727(18) 0.8670(6) 0.2115(7) 0.025(2) Uani 1 1 d . . . H9A H 0.0672 0.8374 0.2674 0.030 Uiso 1 1 calc R . . H9B H 0.2261 0.8754 0.1968 0.030 Uiso 1 1 calc R . . C11 C -0.2617(19) 0.9338(7) 0.2466(8) 0.035(3) Uani 1 1 d . . . H11A H -0.2702 0.9002 0.2994 0.043 Uiso 1 1 calc R . . H11B H -0.3210 0.9853 0.2627 0.043 Uiso 1 1 calc R . . C13 C -0.3356(16) 0.8194(7) 0.1611(9) 0.035(3) Uani 1 1 d . . . H13B H -0.4343 0.7976 0.1159 0.042 Uiso 1 1 calc R . . H13A H -0.3535 0.7886 0.2158 0.042 Uiso 1 1 calc R . . C14 C -0.062(2) 0.8852(6) 0.0368(7) 0.029(3) Uani 1 1 d . . . H14A H 0.0869 0.8947 0.0163 0.035 Uiso 1 1 calc R . . H14B H -0.1479 0.8665 -0.0142 0.035 Uiso 1 1 calc R . . C16 C -0.0261(17) 0.9898(6) 0.1423(7) 0.027(3) Uani 1 1 d . . . H16A H -0.0763 1.0431 0.1554 0.032 Uiso 1 1 calc R . . H16B H 0.1258 0.9934 0.1234 0.032 Uiso 1 1 calc R . . C17 C -0.3750(19) 0.9480(7) 0.0988(8) 0.038(3) Uani 1 1 d . . . H17A H -0.4589 0.9231 0.0508 0.046 Uiso 1 1 calc R . . H17B H -0.4394 0.9997 0.1099 0.046 Uiso 1 1 calc R . . N10 N -0.0344(14) 0.9437(5) 0.2239(6) 0.025(2) Uani 1 1 d . . . N12 N -0.3963(15) 0.9008(5) 0.1787(7) 0.035(2) Uani 1 1 d . . . N15 N -0.1546(15) 0.9589(5) 0.0693(6) 0.025(2) Uani 1 1 d . . . P1 P -0.0570(4) 0.80951(16) 0.12304(16) 0.0179(6) Uani 1 1 d . . . S1 S 0.2434(4) 0.58012(16) 0.02589(17) 0.0241(6) Uani 1 1 d . . . Cl1 Cl -0.1329(4) 0.71129(15) -0.05990(16) 0.0236(6) Uani 1 1 d . . . Pd1 Pd 0.06606(12) 0.69335(5) 0.07482(5) 0.0175(2) Uani 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 C1 0.016(5) 0.015(6) 0.017(5) 0.001(4) -0.004(4) 0.001(4) C2 0.032(6) 0.024(6) 0.015(5) 0.007(5) -0.004(4) -0.008(5) C3 0.041(7) 0.023(7) 0.024(6) 0.004(5) -0.004(5) -0.011(5) C4 0.052(8) 0.025(7) 0.037(7) 0.006(6) -0.026(6) -0.002(6) C5 0.023(6) 0.015(6) 0.065(9) 0.008(6) -0.014(6) 0.003(5) C6 0.026(6) 0.019(6) 0.026(6) -0.004(5) 0.000(5) -0.006(5) C7 0.028(6) 0.016(6) 0.041(7) 0.005(5) -0.001(6) 0.002(4) C8 0.046(7) 0.042(7) 0.009(5) -0.004(5) 0.004(5) 0.010(6) C9 0.036(6) 0.017(6) 0.021(6) -0.011(5) -0.009(5) 0.006(5) C11 0.048(8) 0.020(6) 0.038(7) 0.001(5) 0.030(6) 0.012(5) C13 0.017(5) 0.029(7) 0.058(8) -0.002(6) -0.002(5) -0.003(5) C14 0.050(7) 0.018(6) 0.020(6) 0.001(5) -0.011(5) 0.001(5) C16 0.022(6) 0.019(6) 0.039(7) -0.004(5) 0.006(5) -0.012(5) C17 0.036(7) 0.031(7) 0.047(8) -0.002(6) -0.016(6) 0.007(5) N10 0.036(5) 0.017(5) 0.021(5) -0.001(4) -0.008(4) 0.005(4) N12 0.030(5) 0.021(5) 0.055(7) -0.003(5) 0.008(5) 0.000(4) N15 0.039(6) 0.009(4) 0.025(5) 0.003(4) -0.008(4) 0.000(4) P1 0.0191(13) 0.0171(14) 0.0173(13) 0.0018(12) -0.0001(10) 0.0002(11) S1 0.0291(15) 0.0208(15) 0.0224(14) -0.0026(12) 0.0006(12) 0.0035(12) Cl1 0.0286(14) 0.0249(15) 0.0171(13) 0.0030(11) -0.0043(11) 0.0001(11) Pd1 0.0193(4) 0.0174(4) 0.0157(4) 0.0005(4) -0.0002(3) 0.0010(4) _geom_special_details ; All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. ; loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag C1 C2 1.370(13) . ? C1 C6 1.407(14) . ? C1 Pd1 2.037(9) . ? C2 C3 1.389(15) . ? C2 H2 0.9500 . ? C3 C4 1.359(16) . ? C3 H3 0.9500 . ? C4 C5 1.375(17) . ? C4 H4 0.9500 . ? C5 C6 1.416(15) . ? C5 H5 0.9500 . ? C6 C7 1.491(15) . ? C7 S1 1.825(11) . ? C7 H7A 0.9900 . ? C7 H7B 0.9900 . ? C8 S1 1.800(10) . ? C8 H8A 0.9800 . ? C8 H8B 0.9800 . ? C8 H8C 0.9800 . ? C9 N10 1.489(13) . ? C9 P1 1.847(10) . ? C9 H9A 0.9900 . ? C9 H9B 0.9900 . ? C11 N12 1.438(16) . ? C11 N10 1.465(14) . ? C11 H11A 0.9900 . ? C11 H11B 0.9900 . ? C13 N12 1.475(14) . ? C13 P1 1.835(11) . ? C13 H13B 0.9900 . ? C13 H13A 0.9900 . ? C14 N15 1.478(13) . ? C14 P1 1.846(11) . ? C14 H14A 0.9900 . ? C14 H14B 0.9900 . ? C16 N15 1.461(13) . ? C16 N10 1.470(13) . ? C16 H16A 0.9900 . ? C16 H16B 0.9900 . ? C17 N15 1.455(15) . ? C17 N12 1.465(15) . ? C17 H17A 0.9900 . ? C17 H17B 0.9900 . ? P1 Pd1 2.262(3) . ? S1 Pd1 2.359(3) . ? Cl1 Pd1 2.400(3) . ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag C2 C1 C6 119.1(9) . . ? C2 C1 Pd1 126.5(7) . . ? C6 C1 Pd1 114.4(7) . . ? C1 C2 C3 120.1(10) . . ? C1 C2 H2 120.0 . . ? C3 C2 H2 120.0 . . ? C4 C3 C2 120.5(11) . . ? C4 C3 H3 119.8 . . ? C2 C3 H3 119.8 . . ? C3 C4 C5 122.1(11) . . ? C3 C4 H4 119.0 . . ? C5 C4 H4 119.0 . . ? C4 C5 C6 117.5(11) . . ? C4 C5 H5 121.3 . . ? C6 C5 H5 121.3 . . ? C1 C6 C5 120.6(10) . . ? C1 C6 C7 119.3(9) . . ? C5 C6 C7 120.1(10) . . ? C6 C7 S1 105.9(7) . . ? C6 C7 H7A 110.6 . . ? S1 C7 H7A 110.6 . . ? C6 C7 H7B 110.6 . . ? S1 C7 H7B 110.6 . . ? H7A C7 H7B 108.7 . . ? S1 C8 H8A 109.5 . . ? S1 C8 H8B 109.5 . . ? H8A C8 H8B 109.5 . . ? S1 C8 H8C 109.5 . . ? H8A C8 H8C 109.5 . . ? H8B C8 H8C 109.5 . . ? N10 C9 P1 111.9(7) . . ? N10 C9 H9A 109.2 . . ? P1 C9 H9A 109.2 . . ? N10 C9 H9B 109.2 . . ? P1 C9 H9B 109.2 . . ? H9A C9 H9B 107.9 . . ? N12 C11 N10 115.7(9) . . ? N12 C11 H11A 108.4 . . ? N10 C11 H11A 108.4 . . ? N12 C11 H11B 108.4 . . ? N10 C11 H11B 108.4 . . ? H11A C11 H11B 107.4 . . ? N12 C13 P1 112.8(7) . . ? N12 C13 H13B 109.0 . . ? P1 C13 H13B 109.0 . . ? N12 C13 H13A 109.0 . . ? P1 C13 H13A 109.0 . . ? H13B C13 H13A 107.8 . . ? N15 C14 P1 111.8(7) . . ? N15 C14 H14A 109.3 . . ? P1 C14 H14A 109.3 . . ? N15 C14 H14B 109.3 . . ? P1 C14 H14B 109.3 . . ? H14A C14 H14B 107.9 . . ? N15 C16 N10 114.9(8) . . ? N15 C16 H16A 108.6 . . ? N10 C16 H16A 108.6 . . ? N15 C16 H16B 108.6 . . ? N10 C16 H16B 108.6 . . ? H16A C16 H16B 107.5 . . ? N15 C17 N12 114.6(9) . . ? N15 C17 H17A 108.6 . . ? N12 C17 H17A 108.6 . . ? N15 C17 H17B 108.6 . . ? N12 C17 H17B 108.6 . . ? H17A C17 H17B 107.6 . . ? C11 N10 C16 107.4(8) . . ? C11 N10 C9 111.0(9) . . ? C16 N10 C9 110.6(8) . . ? C11 N12 C17 108.5(9) . . ? C11 N12 C13 110.9(9) . . ? C17 N12 C13 110.6(10) . . ? C17 N15 C16 108.8(9) . . ? C17 N15 C14 111.3(9) . . ? C16 N15 C14 110.7(9) . . ? C13 P1 C14 98.5(6) . . ? C13 P1 C9 97.4(5) . . ? C14 P1 C9 98.2(5) . . ? C13 P1 Pd1 120.3(4) . . ? C14 P1 Pd1 113.4(4) . . ? C9 P1 Pd1 124.1(3) . . ? C8 S1 C7 100.6(5) . . ? C8 S1 Pd1 108.7(4) . . ? C7 S1 Pd1 91.9(4) . . ? C1 Pd1 P1 94.4(3) . . ? C1 Pd1 S1 81.5(3) . . ? P1 Pd1 S1 171.90(10) . . ? C1 Pd1 Cl1 175.3(3) . . ? P1 Pd1 Cl1 89.37(9) . . ? S1 Pd1 Cl1 94.38(9) . . ? _diffrn_measured_fraction_theta_max 0.996 _diffrn_reflns_theta_full 25.00 _diffrn_measured_fraction_theta_full 0.996 _refine_diff_density_max 0.851 _refine_diff_density_min -0.779 _refine_diff_density_rms 0.206