{"text_format":"2","workbook":"xls","n_sheets":1,"sheets":["combine"],"not_rendered":{"charts":0,"images":0,"macros":0,"external_links":0,"defined_names":0,"comments":0,"pivot_tables":0},"unopened":[],"bounds":{"document_bytes":16777216,"sheet_cells":100000,"run_cost":"one","rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0,"cell_chars":16384,"cell_head_chars":4096},"cells_cut":0,"cells_raw":0,"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"combine","index":0,"n_rows":342,"n_cols":29,"rows_kept":342,"cut":false,"hidden":false,"merged":[],"flags":["formulas_cached_only"]}
["Accession number","Description","Sequence","Measured mass [Da]","Charge","Score","Mascot calculated mass [Da]","Peptide delta score","Modifications","Mascot protein hit number","Raw file path","Score plus MS3 score","Spectrum number for MS-MS event","Query number","PTM score","PTM info","Left flanking AA","Right flanking AA","Checked PTM info","XIC 1 [Da*secs]","S_pos","S_count","T_pos","T_count","Y_pos","Y_count","pep_site","figureno","mark"]
["IPI00300244","Tax_Id=9606 Gene_Symbol=ZCWPW1 Isoform 1 of Zinc finger       CW-type PWWP domain protein 1","TVPKNLGLSACKGACPSSAK",2125.0151,3,17,2125.0061,14.5,"1pST",233,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",17,11703,7165,8.426,"6.62 pTVPKNLGLSACKGACPSSAK b1/y20 ,5.76 TVPKNLGLpSACKGACPSSAK b9/y12 ,8.43 TVPKNLGLSACKGACPpSSAK b17/y4 ,8.43 TVPKNLGLSACKGACPSpSAK b18/y3 ,","R","E","8.43 TVPKNLGLSACKGACPpSSAK b17/y4 ,8.43 TVPKNLGLSACKGACPSpSAK b18/y3 ,",-777.777,"S583;S584",2,"NaN",0,"NaN",0,"TVPKNLGLSACKGACP(p)S(p)SAK","pept14282583",1]
["IPI00000398","Tax_Id=9606 Gene_Symbol=NUSAP1 Isoform 1 of Nucleolar and       spindle-associated protein 1","MIIPSLEELDSLK",1582.7596,2,11,1582.7565,10.6,"1oxM 1pST",471,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",11,15016,5606,14.6998,"8.24 MoxIIPpSLEELDSLK b1/y13 b5/y9 ,14.70 MoxIIPSLEELDpSLK b1/y13 b11/y3 ,","-","Y","14.70 MoxIIPSLEELDpSLK b1/y13 b11/y3 ,",-777.777,"S11",1,"NaN",0,"NaN",0,"MIIPSLEELDpSLK","pept14811435",1]
["IPI00015404","Tax_Id=9606 Gene_Symbol=ARID1B Isoform 1 of AT-rich       interactive domain-containing protein 1B","KSSSSTTTGEKITK",1533.7165,2,12,1533.7287,0,"1pST",189,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",12,6187,3837,13.8401,"13.07 KpSSSSTTTGEKITK b2/y13 ,10.19 KSpSSSTTTGEKITK b3/y12 ,10.32 KSSpSSTTTGEKITK b4/y11 ,10.32 KSSSpSTTTGEKITK b5/y10 ,10.45 KSSSSpTTTGEKITK b6/y9 ,13.84 KSSSSTpTTGEKITK b7/y8 ,10.45 KSSSSTTpTGEKITK b8/y7 ,6.41 KSSSSTTTGEKIpTK b13/y2 ,","K","V","13.84 KSSSSTpTTGEKITK b7/y8 ,",-777.777,"NaN",0,"NaN",0,"NaN",0,"NaN","pept14422663",1]
["IPI00033022","Tax_Id=9606 Gene_Symbol=DNM2 Isoform 1 of   Dynamin-2","IEGSGDQVDTLELSGGARINR",2266.0528,2,10,2266.0591,9.5,"1pST",553,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",10,14723,9069,16.0145,"12.30 IEGpSGDQVDTLELSGGARINR b4/y18 ,12.72 IEGSGDQVDpTLELSGGARINR b10/y12 ,16.01 IEGSGDQVDTLELpSGGARINR b14/y8 ,","R","I","16.01 IEGSGDQVDTLELpSGGARINR b14/y8 ,",-777.777,"S357",1,"NaN",0,"NaN",0,"IEGSGDQVDTLEL(p)SGGARINR","pept13887627",1]
["IPI00168123","Tax_Id=9606 Gene_Symbol=C2CD3 cDNA FLJ34770 fis, clone       NT2NE2002870","ELAANSSRSTTPRGK",1733.749,2,11,1733.7498,6.9,"2pST",432,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",11,152,6831,15.09,"9.69 ELAANpSpSRSTTPRGK b6/y10 b7/y9 ,9.69 ELAANpSSRpSTTPRGK b6/y10 b9/y7 ,9.69 ELAANSpSRpSTTPRGK b7/y9 b9/y7 ,7.85 ELAANpSSRSpTTPRGK b6/y10 b10/y6 ,7.85 ELAANSpSRSpTTPRGK b7/y9 b10/y6 ,12.03 ELAANSSRpSpTTPRGK b9/y7 b10/y6 ,7.85 ELAANpSSRSTpTPRGK b6/y10 b11/y5 ,7.85 ELAANSpSRSTpTPRGK b7/y9 b11/y5 ,12.03 ELAANSSRpSTpTPRGK b9/y7 b11/y5 ,15.09 ELAANSSRSpTpTPRGK b10/y6 b11/y5 ,","K","D","15.09 ELAANSSRSpTpTPRGK b10/y6 b11/y5 ,",-777.777,"S232",1,"T233;T234",2,"NaN",0,"ELAANSSR(p)SpTpTPRGK","pept13887540",1]
["IPI00004167","Tax_Id=9606 Gene_Symbol=SALL1 Sal-like protein   1","QLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVTTPSSEK",4213.0861,4,13,4213.0613,3.5,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",13,7802,7655,13.1336,"9.42 QLPPIQLPQpSSSGNTIIPSNSGSSPNMNILAAAVTTPSSEK b10/y32 ,11.03 QLPPIQLPQSpSSGNTIIPSNSGSSPNMNILAAAVTTPSSEK b11/y31 ,11.03 QLPPIQLPQSSpSGNTIIPSNSGSSPNMNILAAAVTTPSSEK b12/y30 ,11.03 QLPPIQLPQSSSGNpTIIPSNSGSSPNMNILAAAVTTPSSEK b15/y27 ,13.13 QLPPIQLPQSSSGNTIIPpSNSGSSPNMNILAAAVTTPSSEK b19/y23 ,13.03 QLPPIQLPQSSSGNTIIPSNpSGSSPNMNILAAAVTTPSSEK b21/y21 ,11.11 QLPPIQLPQSSSGNTIIPSNSGpSSPNMNILAAAVTTPSSEK b23/y19 ,11.11 QLPPIQLPQSSSGNTIIPSNSGSpSPNMNILAAAVTTPSSEK b24/y18 ,8.08 QLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVpTTPSSEK b35/y7 ,8.16 QLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVTpTPSSEK b36/y6 ,8.16 QLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVTTPpSSEK b38/y4 ,8.20 QLPPIQLPQSSSGNTIIPSNSGSSPNMNILAAAVTTPSpSEK b39/y3 ,","K","V","13.13 QLPPIQLPQSSSGNTIIPpSNSGSSPNMNILAAAVTTPSSEK b19/y23 ,",-777.777,"NaN",0,"NaN",0,"NaN",0,"NaN","pept14422658",1]
["IPI00879977","Tax_Id=9606 Gene_Symbol=- 38 kDa protein","THMEKCSSSLAIR",1678.6567,3,14,1678.6609,2.1,"2pST",462,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",14,12258,6506,12.4753,"5.76 pTHMEKCpSSSLAIR b1/y13 b7/y7 ,6.66 pTHMEKCSpSSLAIR b1/y13 b8/y6 ,12.48 THMEKCpSpSSLAIR b7/y7 b8/y6 ,6.62 pTHMEKCSSpSLAIR b1/y13 b9/y5 ,12.27 THMEKCpSSpSLAIR b7/y7 b9/y5 ,8.96 THMEKCSpSpSLAIR b8/y6 b9/y5 ,","K","E","12.48 THMEKCpSpSSLAIR b7/y7 b8/y6 ,",-777.777,"S282;S283;S284",3,"NaN",0,"NaN",0,"THMEKCpS(p)S(p)SLAIR","pept13887563",1]
["IPI00879809","Tax_Id=9606 Gene_Symbol=- 12 kDa protein","MKNLIPFDQMTTEDLNEAFPETK",2871.2282,3,15,2871.2149,10.9,"2pST",270,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",15,15283,9084,11.5387,"11.54 MKNLIPFDQMpTpTEDLNEAFPETK b11/y13 b12/y12 ,10.88 MKNLIPFDQMpTTEDLNEAFPEpTK b11/y13 b22/y2 ,10.88 MKNLIPFDQMTpTEDLNEAFPEpTK b12/y12 b22/y2 ,","K","L","11.54 MKNLIPFDQMpTpTEDLNEAFPETK b11/y13 b12/y12 ,",-777.777,"NaN",0,"T73;T74;T84",3,"NaN",0,"MKNLIPFDQM(p)T(p)TEDLNEAFPE(p)TK","pept14282593",1]
["IPI00099650","Tax_Id=9606 Gene_Symbol=JAG1 Protein   jagged-1","TCMEGWMGPECNRAICRQGCSPK",2864.105,5,11,2864.1144,9.5,"1pST",685,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,11266,14222,15.5628,"15.56 pTCMEGWMGPECNRAICRQGCSPK b1/y23 ,8.47 TCMEGWMGPECNRAICRQGCpSPK b21/y3 ,","K","H","15.56 pTCMEGWMGPECNRAICRQGCSPK b1/y23 ,",-777.777,"NaN",0,"T219",1,"NaN",0,"pTCMEGWMGPECNRAICRQGCSPK","pept98221914",1]
["IPI00830124","Tax_Id=9606 Gene_Symbol=RNF170 Isoform 4 of RING finger       protein 170","MHLLPLDSSSTLTCTVPSACTKPPSR",3111.2973,4,14,3111.2919,4.7,"1oxM 3pST",365,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",14,14491,10449,13.0855,"8.65 MoxHLLPLDpSpSpSTLTCTVPSACTKPPSR b1/y26 b8/y19 b9/y18 b10/y17 ,8.71 MoxHLLPLDpSpSSpTLTCTVPSACTKPPSR b1/y26 b8/y19 b9/y18 b11/y16 ,8.71 MoxHLLPLDpSSpSpTLTCTVPSACTKPPSR b1/y26 b8/y19 b10/y17 b11/y16 ,7.54 MoxHLLPLDSpSpSpTLTCTVPSACTKPPSR b1/y26 b9/y18 b10/y17 b11/y16 ,8.82 MoxHLLPLDpSpSSTLpTCTVPSACTKPPSR b1/y26 b8/y19 b9/y18 b13/y14 ,8.82 MoxHLLPLDpSSpSTLpTCTVPSACTKPPSR b1/y26 b8/y19 b10/y17 b13/y14 ,7.57 MoxHLLPLDSpSpSTLpTCTVPSACTKPPSR b1/y26 b9/y18 b10/y17 b13/y14 ,8.82 MoxHLLPLDpSSSpTLpTCTVPSACTKPPSR b1/y26 b8/y19 b11/y16 b13/y14 ,7.57 MoxHLLPLDSpSSpTLpTCTVPSACTKPPSR b1/y26 b9/y18 b11/y16 b13/y14 ,7.57 MoxHLLPLDSSpSpTLpTCTVPSACTKPPSR b1/y26 b10/y17 b11/y16 b13/y14 ,8.71 MoxHLLPLDpSpSSTLTCpTVPSACTKPPSR b1/y26 b8/y19 b9/y18 b15/y12 ,8.71 MoxHLLPLDpSSpSTLTCpTVPSACTKPPSR b1/y26 b8/y19 b10/y17 b15/y12 ,7.54 MoxHLLPLDSpSpSTLTCpTVPSACTKPPSR b1/y26 b9/y18 b10/y17 b15/y12 ,8.71 MoxHLLPLDpSSSpTLTCpTVPSACTKPPSR b1/y26 b8/y19 b11/y16 b15/y12 ,7.54 MoxHLLPLDSpSSpTLTCpTVPSACTKPPSR b1/y26 b9/y18 b11/y16 b15/y12 ,7.54 MoxHLLPLDSSpSpTLTCpTVPSACTKPPSR b1/y26 b10/y17 b11/y16 b15/y12 ,13.09 MoxHLLPLDpSSSTLpTCpTVPSACTKPPSR b1/y26 b8/y19 b13/y14 b15/y12 ,10.59 MoxHLLPLDSpSSTLpTCpTVPSACTKPPSR b1/y26 b9/y18 b13/y14 b15/y12 ,10.59 MoxHLLPLDSSpSTLpTCpTVPSACTKPPSR b1/y26 b10/y17 b13/y14 b15/y12 ,10.59 MoxHLLPLDSSSpTLpTCpTVPSACTKPPSR b1/y26 b11/y16 b13/y14 b15/y12 ,8.65 MoxHLLPLDpSpSSTLTCTVPpSACTKPPSR b1/y26 b8/y19 b9/y18 b18/y9 ,8.65 MoxHLLPLDpSSpSTLTCTVPpSACTKPPSR b1/y26 b8/y19 b10/y17 b18/y9 ,7.52 MoxHLLPLDSpSpSTLTCTVPpSACTKPPSR b1/y26 b9/y18 b10/y17 b18/y9 ,8.65 MoxHLLPLDpSSSpTLTCTVPpSACTKPPSR b1/y26 b8/y19 b11/y16 b18/y9 ,7.52 MoxHLLPLDSpSSpTLTCTVPpSACTKPPSR b1/y26 b9/y18 b11/y16 b18/y9 ,7.52 MoxHLLPLDSSpSpTLTCTVPpSACTKPPSR b1/y26 b10/y17 b11/y16 b18/y9 ,12.95 MoxHLLPLDpSSSTLpTCTVPpSACTKPPSR b1/y26 b8/y19 b13/y14 b18/y9 ,10.49 MoxHLLPLDSpSSTLpTCTVPpSACTKPPSR b1/y26 b9/y18 b13/y14 b18/y9 ,10.49 MoxHLLPLDSSpSTLpTCTVPpSACTKPPSR b1/y26 b10/y17 b13/y14 b18/y9 ,10.49 MoxHLLPLDSSSpTLpTCTVPpSACTKPPSR b1/y26 b11/y16 b13/y14 b18/y9 ,12.95 MoxHLLPLDpSSSTLTCpTVPpSACTKPPSR b1/y26 b8/y19 b15/y12 b18/y9 ,10.49 MoxHLLPLDSpSSTLTCpTVPpSACTKPPSR b1/y26 b9/y18 b15/y12 b18/y9 ,10.49 MoxHLLPLDSSpSTLTCpTVPpSACTKPPSR b1/y26 b10/y17 b15/y12 b18/y9 ,10.49 MoxHLLPLDSSSpTLTCpTVPpSACTKPPSR b1/y26 b11/y16 b15/y12 b18/y9 ,7.55 MoxHLLPLDSSSTLpTCpTVPpSACTKPPSR b1/y26 b13/y14 b15/y12 b18/y9 ,8.60 MoxHLLPLDpSpSSTLTCTVPSACpTKPPSR b1/y26 b8/y19 b9/y18 b21/y6 ,8.60 MoxHLLPLDpSSpSTLTCTVPSACpTKPPSR b1/y26 b8/y19 b10/y17 b21/y6 ,7.51 MoxHLLPLDSpSpSTLTCTVPSACpTKPPSR b1/y26 b9/y18 b10/y17 b21/y6 ,8.60 MoxHLLPLDpSSSpTLTCTVPSACpTKPPSR b1/y26 b8/y19 b11/y16 b21/y6 ,7.51 MoxHLLPLDSpSSpTLTCTVPSACpTKPPSR b1/y26 b9/y18 b11/y16 b21/y6 ,7.51 MoxHLLPLDSSpSpTLTCTVPSACpTKPPSR b1/y26 b10/y17 b11/y16 b21/y6 ,12.82 MoxHLLPLDpSSSTLpTCTVPSACpTKPPSR b1/y26 b8/y19 b13/y14 b21/y6 ,10.40 MoxHLLPLDSpSSTLpTCTVPSACpTKPPSR b1/y26 b9/y18 b13/y14 b21/y6 ,10.40 MoxHLLPLDSSpSTLpTCTVPSACpTKPPSR b1/y26 b10/y17 b13/y14 b21/y6 ,10.40 MoxHLLPLDSSSpTLpTCTVPSACpTKPPSR b1/y26 b11/y16 b13/y14 b21/y6 ,12.82 MoxHLLPLDpSSSTLTCpTVPSACpTKPPSR b1/y26 b8/y19 b15/y12 b21/y6 ,10.40 MoxHLLPLDSpSSTLTCpTVPSACpTKPPSR b1/y26 b9/y18 b15/y12 b21/y6 ,10.40 MoxHLLPLDSSpSTLTCpTVPSACpTKPPSR b1/y26 b10/y17 b15/y12 b21/y6 ,10.40 MoxHLLPLDSSSpTLTCpTVPSACpTKPPSR b1/y26 b11/y16 b15/y12 b21/y6 ,7.54 MoxHLLPLDSSSTLpTCpTVPSACpTKPPSR b1/y26 b13/y14 b15/y12 b21/y6 ,10.40 MoxHLLPLDpSSSTLTCTVPpSACpTKPPSR b1/y26 b8/y19 b18/y9 b21/y6 ,8.60 MoxHLLPLDSpSSTLTCTVPpSACpTKPPSR b1/y26 b9/y18 b18/y9 b21/y6 ,8.60 MoxHLLPLDSSpSTLTCTVPpSACpTKPPSR b1/y26 b10/y17 b18/y9 b21/y6 ,8.60 MoxHLLPLDSSSpTLTCTVPpSACpTKPPSR b1/y26 b11/y16 b18/y9 b21/y6 ,8.60 MoxHLLPLDpSpSSTLTCTVPSACTKPPpSR b1/y26 b8/y19 b9/y18 b25/y2 ,8.60 MoxHLLPLDpSSpSTLTCTVPSACTKPPpSR b1/y26 b8/y19 b10/y17 b25/y2 ,8.60 MoxHLLPLDpSSSpTLTCTVPSACTKPPpSR b1/y26 b8/y19 b11/y16 b25/y2 ,12.82 MoxHLLPLDpSSSTLpTCTVPSACTKPPpSR b1/y26 b8/y19 b13/y14 b25/y2 ,10.40 MoxHLLPLDSpSSTLpTCTVPSACTKPPpSR b1/y26 b9/y18 b13/y14 b25/y2 ,10.40 MoxHLLPLDSSpSTLpTCTVPSACTKPPpSR b1/y26 b10/y17 b13/y14 b25/y2 ,10.40 MoxHLLPLDSSSpTLpTCTVPSACTKPPpSR b1/y26 b11/y16 b13/y14 b25/y2 ,12.82 MoxHLLPLDpSSSTLTCpTVPSACTKPPpSR b1/y26 b8/y19 b15/y12 b25/y2 ,10.40 MoxHLLPLDSpSSTLTCpTVPSACTKPPpSR b1/y26 b9/y18 b15/y12 b25/y2 ,10.40 MoxHLLPLDSSpSTLTCpTVPSACTKPPpSR b1/y26 b10/y17 b15/y12 b25/y2 ,10.40 MoxHLLPLDSSSpTLTCpTVPSACTKPPpSR b1/y26 b11/y16 b15/y12 b25/y2 ,10.40 MoxHLLPLDpSSSTLTCTVPpSACTKPPpSR b1/y26 b8/y19 b18/y9 b25/y2 ,10.40 MoxHLLPLDpSSSTLTCTVPSACpTKPPpSR b1/y26 b8/y19 b21/y6 b25/y2 ,","-","W","13.09 MoxHLLPLDpSSSTLpTCpTVPSACTKPPSR b1/y26 b8/y19 b13/y14 b15/y12 ,",-777.777,"S8;S18;S25",3,"T13;T15;T21",3,"NaN",0,"MHLLPLD(p)SSSTL(p)TC(p)TVP(p)SAC(p)TKPP(p)SR","pept14811370",1]
["IPI00018769","Tax_Id=9606 Gene_Symbol=THBS2   Thrombospondin-2","NCKGSGRETK",1215.506,2,11,1215.5067,8.4,"1pST",703,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,4897,5638,16.1187,"16.12 NCKGpSGRETK b5/y6 ,5.33 NCKGSGREpTK b9/y2 ,","K","A","16.12 NCKGpSGRETK b5/y6 ,",-777.777,"S479",1,"NaN",0,"NaN",0,"NCKGpSGRETK","pept98221924",1]
["IPI00065533","Tax_Id=9606 Gene_Symbol=FAM20A Protein   FAM20A","HSHDEISILSPLSQCCMIKK",2542.1063,4,14,2542.082,0.4,"2pST",448,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",14,13399,9977,13.2544,"8.47 HpSHDEIpSILSPLSQCCMIKK b2/y19 b7/y14 ,9.82 HpSHDEISILpSPLSQCCMIKK b2/y19 b10/y11 ,13.25 HSHDEIpSILpSPLSQCCMIKK b7/y14 b10/y11 ,9.70 HpSHDEISILSPLpSQCCMIKK b2/y19 b13/y8 ,13.07 HSHDEIpSILSPLpSQCCMIKK b7/y14 b13/y8 ,6.53 HSHDEISILpSPLpSQCCMIKK b10/y11 b13/y8 ,","R","K","13.25 HSHDEIpSILpSPLSQCCMIKK b7/y14 b10/y11 ,",-777.777,"S439;S444;S447;S450",4,"NaN",0,"NaN",0,"H(p)SHDEI(p)SIL(p)SPL(p)SQCCMIKK","pept13887551",1]
["IPI00447621","Tax_Id=9606 Gene_Symbol=KLHL35 Isoform 1 of Kelch-like       protein 35","CLEAVSLEDTIYVMGGLMSK",2406.9807,2,14,2406.9799,0,"2oxM 1pST 1pY",656,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",14,7319,12714,13.3374,"6.80 CLEAVpSLEDTIpYVMoxGGLMoxSK b6/y15 b12/y9 b14/y7 b18/y3 ,13.34 CLEAVSLEDpTIpYVMoxGGLMoxSK b10/y11 b12/y9 b14/y7 b18/y3 ,12.87 CLEAVSLEDTIpYVMoxGGLMoxpSK b12/y9 b14/y7 b18/y3 b19/y2 ,","R","I","13.34 CLEAVSLEDpTIpYVMoxGGLMoxSK b10/y11 b12/y9 b14/y7 b18/y3 ,",-777.777,"S279",1,"T270",1,"Y272",1,"CLEAVSLED(p)TIpYVMGGLM(p)SK","pept98221896",1]
["IPI00395333","Tax_Id=9606 Gene_Symbol=BMP2KL Putative BMP-2-inducible       kinase-like protein","YSDMSPVYRDK",1519.5582,2,12,1519.5455,0,"1pST 1pY",769,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,4607,7366,15.485,"15.18 pYpSDMSPVYRDK b1/y11 b2/y10 ,7.54 YpSDMSPVpYRDK b2/y10 b8/y4 ,15.49 pYSDMpSPVYRDK b1/y11 b5/y7 ,11.45 YSDMpSPVpYRDK b5/y7 b8/y4 ,","K","S","15.49 pYSDMpSPVYRDK b1/y11 b5/y7 ,",-777.777,"S69;S72",2,"NaN",0,"Y68",1,"pY(p)SDM(p)SPVYRDK","pept98221972",1]
["IPI00026665","Tax_Id=9606 Gene_Symbol=QARS Glutaminyl-tRNA     synthetase","RLSFLVSYIASKK",1670.8295,2,15,1670.8198,2.6,"2pST",614,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",15,9609,8385,12.7146,"8.59 RLpSFLVpSYIASKK b3/y11 b7/y7 ,7.55 RLpSFLVSYIApSKK b3/y11 b11/y3 ,12.71 RLSFLVpSYIApSKK b7/y7 b11/y3 ,","R","I","12.71 RLSFLVpSYIApSKK b7/y7 b11/y3 ,",-777.777,"S92;S88;S96",3,"NaN",0,"NaN",0,"RL(p)SFLVpSYIA(p)SKK","pept98221872",1]
["IPI00479128","Tax_Id=9606 Gene_Symbol=RNF220 cDNA   FLJ54701","SLLLSASIK",1010.5499,2,11,1010.5413,0.1,"1pST",340,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",11,9893,3262,16.7995,"16.80 pSLLLSASIK b1/y9 ,8.88 SLLLpSASIK b5/y5 ,4.81 SLLLSApSIK b7/y3 ,","K","R","16.80 pSLLLSASIK b1/y9 ,",-777.777,"S30",1,"NaN",0,"NaN",0,"pSLLLSASIK","pept14282621",1]
["IPI00426267","Tax_Id=9606 Gene_Symbol=LRRC7 Isoform 1 of Leucine-rich       repeat-containing protein 7","VENSNPTANTEQTVK",1710.7615,3,11,1710.7462,4.7,"1pST",523,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",11,14610,6707,16.9341,"7.60 VENpSNPTANTEQTVK b4/y12 ,7.66 VENSNPpTANTEQTVK b7/y9 ,16.93 VENSNPTANpTEQTVK b10/y6 ,13.07 VENSNPTANTEQpTVK b13/y3 ,","R","E","16.93 VENSNPTANpTEQTVK b10/y6 ,",-777.777,"NaN",0,"T605;T608",2,"NaN",0,"VENSNPTAN(p)TEQ(p)TVK","pept13887603",1]
["IPI00440495","Tax_Id=9606 Gene_Symbol=DENND1B Isoform 1 of DENN       domain-containing protein 1B","SLYNHPVPK",1133.5308,1,10,1133.527,0,"1pY",406,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",10,15587,3558,18.2774,"18.28 SLpYNHPVPK b3/y7 ,","R","A","18.28 SLpYNHPVPK b3/y7 ,",-777.777,"NaN",0,"NaN",0,"Y134",1,"SLpYNHPVPK","pept14282667",1]
["IPI00298956","Tax_Id=9606 Gene_Symbol=FSTL4 Isoform 2 of       Follistatin-related protein 4","IFMSYEEICPQR",1651.6889,2,18,1651.6775,9.4,"1pST",319,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",18,5201,5853,10.4499,"10.45 IFMpSYEEICPQR b4/y9 ,","K","E","10.45 IFMpSYEEICPQR b4/y9 ,",-777.777,"S316",1,"NaN",0,"NaN",0,"IFMpSYEEICPQR","pept14811353",1]
["IPI00168123","Tax_Id=9606 Gene_Symbol=C2CD3 cDNA FLJ34770 fis, clone       NT2NE2002870","ELAANSSRSTTPRGK",1733.7428,2,10,1733.7498,6.2,"2pST",604,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",10,11095,8895,18.4834,"7.89 ELAANpSpSRSTTPRGK b6/y10 b7/y9 ,7.89 ELAANpSSRpSTTPRGK b6/y10 b9/y7 ,7.89 ELAANSpSRpSTTPRGK b7/y9 b9/y7 ,7.02 ELAANpSSRSpTTPRGK b6/y10 b10/y6 ,7.02 ELAANSpSRSpTTPRGK b7/y9 b10/y6 ,11.91 ELAANSSRpSpTTPRGK b9/y7 b10/y6 ,7.02 ELAANpSSRSTpTPRGK b6/y10 b11/y5 ,7.02 ELAANSpSRSTpTPRGK b7/y9 b11/y5 ,11.91 ELAANSSRpSTpTPRGK b9/y7 b11/y5 ,18.48 ELAANSSRSpTpTPRGK b10/y6 b11/y5 ,","K","D","18.48 ELAANSSRSpTpTPRGK b10/y6 b11/y5 ,",-777.777,"NaN",0,"T233;T234",2,"NaN",0,"ELAANSSRSpTpTPRGK","pept98221866",1]
["IPI00375208","Tax_Id=9606 Gene_Symbol=- Hypothetical gene supported by       AB033109","VELSYPDGSPAEWVTVQIK",2276.9982,3,10,2277.0007,1.6,"2pST",507,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",10,4320,8493,18.5178,"11.04 VELpSYPDGpSPAEWVTVQIK b4/y16 b9/y11 ,10.59 VELpSYPDGSPAEWVpTVQIK b4/y16 b15/y5 ,18.52 VELSYPDGpSPAEWVpTVQIK b9/y11 b15/y5 ,","K","A","18.52 VELSYPDGpSPAEWVpTVQIK b9/y11 b15/y5 ,",-777.777,"S362",1,"T368",1,"NaN",0,"VELSYPDGpSPAEWVpTVQIK","pept14811463",1]
["IPI00216049","Tax_Id=9606 Gene_Symbol=HNRNPK Isoform 1 of Heterogeneous       nuclear ribonucleoprotein K","IILDLISESPIK",1419.7572,2,13,1419.7626,0,"1pST",28,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,12278,6784,15.7962,"15.80 IILDLIpSESPIK b7/y6 ,15.49 IILDLISEpSPIK b9/y4 ,","K","G","15.80 IILDLIpSESPIK b7/y6 ,",-777.777,"S214;S216",2,"NaN",0,"NaN",0,"IILDLI(p)SE(p)SPIK","pept98221702",1]
["IPI00013508","Tax_Id=9606 Gene_Symbol=ACTN1   Alpha-actinin-1","MDHYDSQQTNDYMQPEEDWDR",2797.9748,3,18,2797.9898,0,"1oxM 1pST",37,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",18,9198,10527,10.8857,"8.16 MoxDHYDpSQQTNDYMQPEEDWDR b1/y21 b6/y16 ,8.33 MoxDHYDSQQpTNDYMQPEEDWDR b1/y21 b9/y13 ,10.89 MDHYDpSQQTNDYMoxQPEEDWDR b6/y16 b13/y9 ,8.33 MDHYDSQQpTNDYMoxQPEEDWDR b9/y13 b13/y9 ,","-","D","10.89 MDHYDpSQQTNDYMoxQPEEDWDR b6/y16 b13/y9 ,",-777.777,"S6",1,"T9",1,"NaN",0,"MDHYD(p)SQQ(p)TNDYMQPEEDWDR","pept13887492",1]
["IPI00739770","Tax_Id=9606 Gene_Symbol=C2orf77 hypothetical protein       LOC129881","NKAELKTIAEYR",1514.7452,3,11,1514.7493,10.4,"1pST",501,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",11,7103,5339,17.9198,"17.92 NKAELKpTIAEYR b7/y6 ,","K","A","17.92 NKAELKpTIAEYR b7/y6 ,",-777.777,"NaN",0,"T376",1,"NaN",0,"NKAELKpTIAEYR","pept14811457",1]
["IPI00148059","Tax_Id=9606 Gene_Symbol=IL17RB Isoform 1 of Interleukin-17       receptor B","TSFSTTTLLPPIK",1564.7109,2,11,1564.7191,5,"2pST",454,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",11,8177,5908,18.1743,"18.17 pTpSFSTTTLLPPIK b1/y13 b2/y12 ,14.37 pTSFpSTTTLLPPIK b1/y13 b4/y10 ,11.20 TpSFpSTTTLLPPIK b2/y12 b4/y10 ,14.56 pTSFSpTTTLLPPIK b1/y13 b5/y9 ,11.34 TpSFSpTTTLLPPIK b2/y12 b5/y9 ,11.61 TSFpSpTTTLLPPIK b4/y10 b5/y9 ,11.47 pTSFSTpTTLLPPIK b1/y13 b6/y8 ,8.92 TpSFSTpTTLLPPIK b2/y12 b6/y8 ,9.10 TSFpSTpTTLLPPIK b4/y10 b6/y8 ,9.10 TSFSpTpTTLLPPIK b5/y9 b6/y8 ,11.47 pTSFSTTpTLLPPIK b1/y13 b7/y7 ,8.92 TpSFSTTpTLLPPIK b2/y12 b7/y7 ,9.10 TSFpSTTpTLLPPIK b4/y10 b7/y7 ,9.10 TSFSpTTpTLLPPIK b5/y9 b7/y7 ,9.19 TSFSTpTpTLLPPIK b6/y8 b7/y7 ,","K","V","18.17 pTpSFSTTTLLPPIK b1/y13 b2/y12 ,",-777.777,"S322",1,"T321",1,"NaN",0,"pT(p)SFSTTTLLPPIK","pept13887557",1]
["IPI00440495","Tax_Id=9606 Gene_Symbol=DENND1B Isoform 1 of DENN       domain-containing protein 1B","SLYNHPVPK",1133.5311,1,11,1133.527,0,"1pY",406,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",11,14485,3559,18.2774,"18.28 SLpYNHPVPK b3/y7 ,","R","A","18.28 SLpYNHPVPK b3/y7 ,",-777.777,"NaN",0,"NaN",0,"Y134",1,"SLpYNHPVPK","pept14282666",1]
["IPI00869011","Tax_Id=9606 Gene_Symbol=CARD11 Caspase recruitment       domain-containing protein 11","EACIVNLESKLR",1510.725,2,10,1510.7214,2.9,"1pST",545,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",10,12773,5675,19.2993,"19.30 EACIVNLEpSKLR b9/y4 ,","R","R","19.30 EACIVNLEpSKLR b9/y4 ,",-777.777,"S433",1,"NaN",0,"NaN",0,"EACIVNLEpSKLR","pept13887619",1]
["IPI00176156","Tax_Id=9606 Gene_Symbol=FAM47B Protein   FAM47B","RVSSLCPEPTKTGASHLK",2126.9784,3,10,2126.9585,1,"2pST",548,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",10,4757,8570,19.3874,"8.57 RVpSpSLCPEPTKTGASHLK b3/y16 b4/y15 ,8.21 RVpSSLCPEPpTKTGASHLK b3/y16 b10/y9 ,8.21 RVSpSLCPEPpTKTGASHLK b4/y15 b10/y9 ,7.05 RVpSSLCPEPTKpTGASHLK b3/y16 b12/y7 ,7.05 RVSpSLCPEPTKpTGASHLK b4/y15 b12/y7 ,7.01 RVSSLCPEPpTKpTGASHLK b10/y9 b12/y7 ,7.00 RVpSSLCPEPTKTGApSHLK b3/y16 b15/y4 ,7.00 RVSpSLCPEPTKTGApSHLK b4/y15 b15/y4 ,8.07 RVSSLCPEPpTKTGApSHLK b10/y9 b15/y4 ,19.39 RVSSLCPEPTKpTGApSHLK b12/y7 b15/y4 ,","R","E","19.39 RVSSLCPEPTKpTGApSHLK b12/y7 b15/y4 ,",-777.777,"S433",1,"T430",1,"NaN",0,"RVSSLCPEPTKpTGApSHLK","pept13887622",1]
["IPI00735713","Tax_Id=9606 Gene_Symbol=LOC652599 similar to IgGFc-binding       protein precursor","VAYDLVYYVR",1339.6102,2,12,1339.6213,10.9,"1pY",326,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",12,5131,4236,17.4855,"17.49 VApYDLVYYVR b3/y8 ,16.76 VAYDLVpYYVR b7/y4 ,9.65 VAYDLVYpYVR b8/y3 ,","R","V","17.49 VApYDLVYYVR b3/y8 ,",-777.777,"NaN",0,"NaN",0,"Y33;Y37",2,"VA(p)YDLV(p)YYVR","pept14282614",1]
["IPI00916298","Tax_Id=9606 Gene_Symbol=SUCLG1 Protein","PTLAAAADIATMVSGSSGLAAAR",2277.0213,4,14,2277.0113,3,"1oxM 2pST",278,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",14,10011,7534,15.6333,"15.63 PpTLAAAADIApTMoxVSGSSGLAAAR b2/y22 b11/y13 b12/y12 ,9.78 PpTLAAAADIATMoxVpSGSSGLAAAR b2/y22 b12/y12 b14/y10 ,9.87 PTLAAAADIApTMoxVpSGSSGLAAAR b11/y13 b12/y12 b14/y10 ,9.78 PpTLAAAADIATMoxVSGpSSGLAAAR b2/y22 b12/y12 b16/y8 ,9.87 PTLAAAADIApTMoxVSGpSSGLAAAR b11/y13 b12/y12 b16/y8 ,9.78 PTLAAAADIATMoxVpSGpSSGLAAAR b12/y12 b14/y10 b16/y8 ,9.69 PpTLAAAADIATMoxVSGSpSGLAAAR b2/y22 b12/y12 b17/y7 ,9.78 PTLAAAADIApTMoxVSGSpSGLAAAR b11/y13 b12/y12 b17/y7 ,9.69 PTLAAAADIATMoxVpSGSpSGLAAAR b12/y12 b14/y10 b17/y7 ,9.69 PTLAAAADIATMoxVSGpSpSGLAAAR b12/y12 b16/y8 b17/y7 ,","-","L","15.63 PpTLAAAADIApTMoxVSGSSGLAAAR b2/y22 b11/y13 b12/y12 ,",-777.777,"NaN",0,"T2;T11",2,"NaN",0,"PpTLAAAADIApTMVSGSSGLAAAR","pept14282595",1]
["IPI00794880","Tax_Id=9606 Gene_Symbol=CHD7 Isoform 1 of       Chromodomain-helicase-DNA-binding protein 7","NPNKLDINTLTGEER",1792.82,2,14,1792.8356,2.8,"1pST",445,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",14,8588,7149,15.6602,"15.66 NPNKLDINpTLTGEER b9/y7 ,8.52 NPNKLDINTLpTGEER b11/y5 ,","R","V","15.66 NPNKLDINpTLTGEER b9/y7 ,",-777.777,"NaN",0,"T2640",1,"NaN",0,"NPNKLDINpTLTGEER","pept13887550",1]
["IPI00293026","Tax_Id=9606 Gene_Symbol=EFTUD1 Isoform 1 of Elongation       factor Tu GTP-binding domain-containing protein 1","VLQEEMKEGTDMFIIK",1989.9153,3,16,1989.9192,2.6,"1pST",316,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",16,5402,7444,14.0815,"14.08 VLQEEMKEGpTDMFIIK b10/y7 ,","R","A","14.08 VLQEEMKEGpTDMFIIK b10/y7 ,",-777.777,"NaN",0,"T1019",1,"NaN",0,"VLQEEMKEGpTDMFIIK","pept14811352",1]
["IPI00016284","Tax_Id=9606 Gene_Symbol=GGNBP2 Isoform 1 of       Gametogenetin-binding protein 2","KNVPQFAEPTETLFGPDSGK",2320.9831,4,12,2321.0018,0,"2pST",316,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",12,14249,7702,18.2375,"18.24 KNVPQFAEPpTEpTLFGPDSGK b10/y11 b12/y9 ,17.96 KNVPQFAEPpTETLFGPDpSGK b10/y11 b18/y3 ,13.64 KNVPQFAEPTEpTLFGPDpSGK b12/y9 b18/y3 ,","R","G","18.24 KNVPQFAEPpTEpTLFGPDSGK b10/y11 b12/y9 ,",-777.777,"S619",1,"T611;T613",2,"NaN",0,"KNVPQFAEPpTE(p)TLFGPD(p)SGK","pept14282610",1]
["IPI00456626","Tax_Id=9606 Gene_Symbol=TXLNB   Beta-taxilin","EQETVLQAQLTLYSGR",1914.909,4,10,1914.9088,6.2,"1pST",783,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",10,4397,10206,20.3545,"6.59 EQEpTVLQAQLTLYSGR b4/y13 ,8.63 EQETVLQAQLpTLYSGR b11/y6 ,20.35 EQETVLQAQLTLYpSGR b14/y3 ,","K","F","20.35 EQETVLQAQLTLYpSGR b14/y3 ,",-777.777,"S364",1,"NaN",0,"NaN",0,"EQETVLQAQLTLYpSGR","pept98221986",1]
["IPI00218776","Tax_Id=9606 Gene_Symbol=SENP7 Isoform 2 of Sentrin-specific       protease 7","YSDSKVELTLISR",1589.7706,4,14,1589.7702,6.6,"1pST",132,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1000.raw",14,5112,3588,16.4529,"5.70 YpSDSKVELTLISR b2/y12 ,5.73 YSDpSKVELTLISR b4/y10 ,5.70 YSDSKVELpTLISR b9/y5 ,16.45 YSDSKVELTLIpSR b12/y2 ,","K","K","16.45 YSDSKVELTLIpSR b12/y2 ,",-777.777,"S266",1,"NaN",0,"NaN",0,"YSDSKVELTLIpSR","pept14555364",1]
["IPI00376206","Tax_Id=9606 Gene_Symbol=HSD17B13 Isoform 2 of 17-beta       hydroxysteroid dehydrogenase 13","TGIKTSCLCPVFVNTGFTKNPSTR",2844.2993,4,10,2844.2741,3.8,"2pST",480,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",10,13431,10031,20.4567,"12.59 pTGIKpTSCLCPVFVNTGFTKNPSTR b1/y24 b5/y20 ,10.09 pTGIKTpSCLCPVFVNTGFTKNPSTR b1/y24 b6/y19 ,8.20 TGIKpTpSCLCPVFVNTGFTKNPSTR b5/y20 b6/y19 ,15.92 pTGIKTSCLCPVFVNpTGFTKNPSTR b1/y24 b15/y10 ,8.54 TGIKpTSCLCPVFVNpTGFTKNPSTR b5/y20 b15/y10 ,8.01 TGIKTpSCLCPVFVNpTGFTKNPSTR b6/y19 b15/y10 ,12.39 pTGIKTSCLCPVFVNTGFpTKNPSTR b1/y24 b18/y7 ,8.04 TGIKpTSCLCPVFVNTGFpTKNPSTR b5/y20 b18/y7 ,8.21 TGIKTpSCLCPVFVNTGFpTKNPSTR b6/y19 b18/y7 ,14.77 TGIKTSCLCPVFVNpTGFpTKNPSTR b15/y10 b18/y7 ,8.68 pTGIKTSCLCPVFVNTGFTKNPpSTR b1/y24 b22/y3 ,8.93 TGIKpTSCLCPVFVNTGFTKNPpSTR b5/y20 b22/y3 ,10.27 TGIKTpSCLCPVFVNTGFTKNPpSTR b6/y19 b22/y3 ,20.46 TGIKTSCLCPVFVNpTGFTKNPpSTR b15/y10 b22/y3 ,17.21 TGIKTSCLCPVFVNTGFpTKNPpSTR b18/y7 b22/y3 ,10.09 pTGIKTSCLCPVFVNTGFTKNPSpTR b1/y24 b23/y2 ,8.20 TGIKpTSCLCPVFVNTGFTKNPSpTR b5/y20 b23/y2 ,8.97 TGIKTpSCLCPVFVNTGFTKNPSpTR b6/y19 b23/y2 ,17.36 TGIKTSCLCPVFVNpTGFTKNPSpTR b15/y10 b23/y2 ,14.52 TGIKTSCLCPVFVNTGFpTKNPSpTR b18/y7 b23/y2 ,10.21 TGIKTSCLCPVFVNTGFTKNPpSpTR b22/y3 b23/y2 ,","K","L","20.46 TGIKTSCLCPVFVNpTGFTKNPpSTR b15/y10 b22/y3 ,",-777.777,"S230",1,"T223",1,"NaN",0,"TGIKTSCLCPVFVNpTGFTKNP(p)STR","pept14811441",1]
["IPI00394879","Tax_Id=9606 Gene_Symbol=LRRC9 Isoform 2 of Leucine-rich       repeat-containing protein 9","LISLDDK",882.4123,1,10,882.4099,6.7,"1pST",762,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",10,16746,3373,20.4666,"20.47 LIpSLDDK b3/y5 ,","K","T","20.47 LIpSLDDK b3/y5 ,",-777.777,"S678",1,"NaN",0,"NaN",0,"LIpSLDDK","pept98221966",1]
["IPI00023727","Tax_Id=9606 Gene_Symbol=KIF3C Kinesin-like protein       KIF3C","ALHMERLMRLDSFLERPSTSK",2692.2176,3,10,2692.2267,0,"1oxM 2pST",392,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",10,9009,8567,20.5445,"6.42 ALHMoxERLMRLDpSFLERPpSTSK b4/y18 b12/y10 b18/y4 ,6.42 ALHMoxERLMRLDpSFLERPSpTSK b4/y18 b12/y10 b19/y3 ,9.59 ALHMoxERLMRLDSFLERPpSpTSK b4/y18 b18/y4 b19/y3 ,6.42 ALHMoxERLMRLDpSFLERPSTpSK b4/y18 b12/y10 b20/y2 ,9.59 ALHMoxERLMRLDSFLERPpSTpSK b4/y18 b18/y4 b20/y2 ,12.54 ALHMoxERLMRLDSFLERPSpTpSK b4/y18 b19/y3 b20/y2 ,9.70 ALHMERLMoxRLDpSFLERPpSTSK b8/y14 b12/y10 b18/y4 ,9.70 ALHMERLMoxRLDpSFLERPSpTSK b8/y14 b12/y10 b19/y3 ,16.22 ALHMERLMoxRLDSFLERPpSpTSK b8/y14 b18/y4 b19/y3 ,9.70 ALHMERLMoxRLDpSFLERPSTpSK b8/y14 b12/y10 b20/y2 ,16.22 ALHMERLMoxRLDSFLERPpSTpSK b8/y14 b18/y4 b20/y2 ,20.54 ALHMERLMoxRLDSFLERPSpTpSK b8/y14 b19/y3 b20/y2 ,","R","V","20.54 ALHMERLMoxRLDSFLERPSpTpSK b8/y14 b19/y3 b20/y2 ,",-777.777,"S755;S753",2,"T754",1,"NaN",0,"ALHMERLMRLDSFLERP(p)SpTpSK","pept14282654",1]
["IPI00642514","Tax_Id=9606 Gene_Symbol=RP13-102H20.1 Isoform 3 of Putative       Rho GTPase-activating protein FLJ46335","HGLSAVGIFTLEYSVQRVRQLR",2608.3726,4,17,2608.3639,8.7,"1pST",105,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1000.raw",17,3231,5443,13.6395,"13.64 HGLpSAVGIFTLEYSVQRVRQLR b4/y19 ,7.92 HGLSAVGIFpTLEYSVQRVRQLR b10/y13 ,7.65 HGLSAVGIFTLEYpSVQRVRQLR b14/y9 ,","K","E","13.64 HGLpSAVGIFTLEYSVQRVRQLR b4/y19 ,",-777.777,"S116",1,"NaN",0,"NaN",0,"HGLpSAVGIFTLEYSVQRVRQLR","pept14555353",1]
["IPI00144243","Tax_Id=9606 Gene_Symbol=HIVEP2 Transcription factor       HIVEP2","GISSSSLK",857.3937,1,11,857.3895,0,"1pST",466,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",11,4039,2707,19.8142,"12.22 GIpSSSSLK b3/y6 ,19.20 GISpSSSLK b4/y5 ,19.81 GISSpSSLK b5/y4 ,12.60 GISSSpSLK b6/y3 ,","K","E","19.81 GISSpSSLK b5/y4 ,",-777.777,"S620;S621",2,"NaN",0,"NaN",0,"GIS(p)S(p)SSLK","pept14811430",1]
["IPI00168123","Tax_Id=9606 Gene_Symbol=C2CD3 cDNA FLJ34770 fis, clone       NT2NE2002870","ELAANSSRSTTPRGK",1733.7408,2,12,1733.7498,0.1,"2pST",604,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,10591,8855,18.9271,"7.00 ELAANpSpSRSTTPRGK b6/y10 b7/y9 ,7.00 ELAANpSSRpSTTPRGK b6/y10 b9/y7 ,7.97 ELAANSpSRpSTTPRGK b7/y9 b9/y7 ,7.01 ELAANpSSRSpTTPRGK b6/y10 b10/y6 ,7.89 ELAANSpSRSpTTPRGK b7/y9 b10/y6 ,15.27 ELAANSSRpSpTTPRGK b9/y7 b10/y6 ,7.01 ELAANpSSRSTpTPRGK b6/y10 b11/y5 ,7.89 ELAANSpSRSTpTPRGK b7/y9 b11/y5 ,15.27 ELAANSSRpSTpTPRGK b9/y7 b11/y5 ,18.93 ELAANSSRSpTpTPRGK b10/y6 b11/y5 ,","K","D","18.93 ELAANSSRSpTpTPRGK b10/y6 b11/y5 ,",-777.777,"S232",1,"T233;T234",2,"NaN",0,"ELAANSSR(p)SpTpTPRGK","pept98221865",1]
["IPI00922499","Tax_Id=9606 Gene_Symbol=- cDNA FLJ61761","KPGASGPGSSVTLQR",1520.7421,3,11,1520.7348,0.6,"1pST",356,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",11,6672,4820,20.0288,"15.17 KPGApSGPGSSVTLQR b5/y11 ,20.03 KPGASGPGpSSVTLQR b9/y7 ,15.41 KPGASGPGSpSVTLQR b10/y6 ,19.71 KPGASGPGSSVpTLQR b12/y4 ,","R","L","20.03 KPGASGPGpSSVTLQR b9/y7 ,",-777.777,"S55",1,"T58",1,"NaN",0,"KPGASGPG(p)SSV(p)TLQR","pept14282634",1]
["IPI00219352","Tax_Id=9606 Gene_Symbol=CBS Isoform 1 of Cystathionine       beta-synthase","VDVLRALGAEIVRTPTNAR",2210.0885,2,13,2210.0974,2.4,"2pST",608,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,8970,11998,18.0557,"18.06 VDVLRALGAEIVRpTPpTNAR b14/y6 b16/y4 ,","K","F","18.06 VDVLRALGAEIVRpTPpTNAR b14/y6 b16/y4 ,",-777.777,"NaN",0,"T191;T193",2,"NaN",0,"VDVLRALGAEIVRpTPpTNAR","pept98221870",1]
["IPI00442194","Tax_Id=9606 Gene_Symbol=RGL4 cDNA FLJ16354 fis, clone       TESTI4000319, weakly similar to GUANINE NUCLEOTIDE DISSOCIATION STIMULATOR       RALGDS FORM B","TWAGVSSK",914.3975,1,12,914.3899,0.5,"1pST",500,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",12,8728,3193,19.1997,"11.53 pTWAGVSSK b1/y8 ,19.20 TWAGVpSSK b6/y3 ,12.22 TWAGVSpSK b7/y2 ,","K","S","19.20 TWAGVpSSK b6/y3 ,",-777.777,"S338",1,"NaN",0,"NaN",0,"TWAGVpSSK","pept13887588",1]
["IPI00553034","Tax_Id=9606 Gene_Symbol=SAMHD1 Putative uncharacterized       protein SAMHD1","EAYTKLTDNIFLEILYSTDPK",2633.1921,4,11,2633.1954,0.4,"2pY",506,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",11,14289,9492,20.5939,"20.59 EApYTKLTDNIFLEILpYSTDPK b3/y19 b16/y6 ,","M","L","20.59 EApYTKLTDNIFLEILpYSTDPK b3/y19 b16/y6 ,",-777.777,"NaN",0,"NaN",0,"Y4;Y17",2,"EApYTKLTDNIFLEILpYSTDPK","pept14811462",1]
["IPI00168123","Tax_Id=9606 Gene_Symbol=C2CD3 cDNA FLJ34770 fis, clone       NT2NE2002870","ELAANSSRSTTPRGK",1733.7408,2,13,1733.7498,0.3,"2pST",604,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,7511,8859,18.7032,"12.03 ELAANpSpSRSTTPRGK b6/y10 b7/y9 ,18.70 ELAANpSSRpSTTPRGK b6/y10 b9/y7 ,15.09 ELAANSpSRpSTTPRGK b7/y9 b9/y7 ,14.75 ELAANpSSRSpTTPRGK b6/y10 b10/y6 ,11.78 ELAANSpSRSpTTPRGK b7/y9 b10/y6 ,14.92 ELAANSSRpSpTTPRGK b9/y7 b10/y6 ,11.78 ELAANpSSRSTpTPRGK b6/y10 b11/y5 ,9.44 ELAANSpSRSTpTPRGK b7/y9 b11/y5 ,11.91 ELAANSSRpSTpTPRGK b9/y7 b11/y5 ,11.91 ELAANSSRSpTpTPRGK b10/y6 b11/y5 ,","K","D","18.70 ELAANpSSRpSTTPRGK b6/y10 b9/y7 ,",-777.777,"S232;S229",2,"T233",1,"NaN",0,"ELAAN(p)SSRpS(p)TTPRGK","pept98221864",1]
["IPI00397964","Tax_Id=9606 Gene_Symbol=ZNF662 Isoform 1 of Zinc finger       protein 662","MLENYGAVASLAAFPFPKPALISQLER",3012.5409,4,11,3012.5184,9.6,"1pST",204,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1000.raw",11,10821,6031,20.8372,"6.41 MLENYGAVApSLAAFPFPKPALISQLER b10/y18 ,20.84 MLENYGAVASLAAFPFPKPALIpSQLER b23/y5 ,","-","G","20.84 MLENYGAVASLAAFPFPKPALIpSQLER b23/y5 ,",-777.777,"S23",1,"NaN",0,"NaN",0,"MLENYGAVASLAAFPFPKPALIpSQLER","pept14555403",1]
["IPI00293095","Tax_Id=9606 Gene_Symbol=CCDC83 Isoform 1 of Coiled-coil       domain-containing protein 83","DYVNLGPLGVKLMSVESK",2107.9652,2,12,2107.9666,11.2,"2pST",743,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,10256,11440,19.8652,"19.87 DYVNLGPLGVKLMpSVEpSK b14/y5 b17/y2 ,","K","K","19.87 DYVNLGPLGVKLMpSVEpSK b14/y5 b17/y2 ,",-777.777,"S374;S377",2,"NaN",0,"NaN",0,"DYVNLGPLGVKLMpSVEpSK","pept98221956",1]
["IPI00335541","Tax_Id=9606 Gene_Symbol=TIMELESS Isoform 1 of Protein       timeless homolog","FGGSYIVQGLKSIGER",1789.8621,2,12,1789.8764,0.8,"1pST",768,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,9897,9292,19.9778,"19.98 FGGpSYIVQGLKSIGER b4/y13 ,11.91 FGGSYIVQGLKpSIGER b12/y5 ,","R","D","19.98 FGGpSYIVQGLKSIGER b4/y13 ,",-777.777,"S281",1,"NaN",0,"NaN",0,"FGGpSYIVQGLKSIGER","pept98221971",1]
["IPI00045840","Tax_Id=9606 Gene_Symbol=BBS1 Isoform 2 of Bardet-Biedl       syndrome 1 protein","IYRDKALLNVIHTPDAVTSLCFGR",2838.4258,3,12,2838.4252,5.7,"1pST",400,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",12,17349,8989,19.9778,"19.98 IYRDKALLNVIHpTPDAVTSLCFGR b13/y12 ,19.17 IYRDKALLNVIHTPDAVpTSLCFGR b18/y7 ,18.91 IYRDKALLNVIHTPDAVTpSLCFGR b19/y6 ,","R","Y","19.98 IYRDKALLNVIHpTPDAVTSLCFGR b13/y12 ,",-777.777,"S412",1,"T406;T411",2,"NaN",0,"IYRDKALLNVIH(p)TPDAV(p)T(p)SLCFGR","pept14282660",1]
["IPI00219430","Tax_Id=9606 Gene_Symbol=MED24 Mediator of RNA polymerase II       transcription subunit 24","YAISSQMVSYSSVLTAISK",2289.9424,3,11,2289.9282,0,"1oxM 1pST 2pY",579,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",11,6504,9211,21.1363,"9.82 pYAIpSSQMoxVSpYSSVLTAISK b1/y19 b4/y16 b7/y13 b10/y10 ,9.82 pYAISpSQMoxVSpYSSVLTAISK b1/y19 b5/y15 b7/y13 b10/y10 ,16.69 pYAISSQMoxVpSpYSSVLTAISK b1/y19 b7/y13 b9/y11 b10/y10 ,21.14 pYAISSQMoxVSpYpSSVLTAISK b1/y19 b7/y13 b10/y10 b11/y9 ,16.46 pYAISSQMoxVSpYSpSVLTAISK b1/y19 b7/y13 b10/y10 b12/y8 ,9.59 pYAISSQMoxVSpYSSVLpTAISK b1/y19 b7/y13 b10/y10 b15/y5 ,9.49 pYAISSQMoxVSpYSSVLTAIpSK b1/y19 b7/y13 b10/y10 b18/y2 ,","K","F","21.14 pYAISSQMoxVSpYpSSVLTAISK b1/y19 b7/y13 b10/y10 b11/y9 ,",-777.777,"S76",1,"NaN",0,"Y66;Y75",2,"pYAISSQMVSpY(p)SSVLTAISK","pept13887650",1]
["IPI00853196","Tax_Id=9606 Gene_Symbol=ZSWIM5 Zinc finger SWIM       domain-containing protein 5","SSGKLMSTDKAPLR",1569.7632,2,12,1569.7586,3.2,"1pST",411,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",12,7985,5550,20.3545,"11.04 pSSGKLMSTDKAPLR b1/y14 ,11.20 SpSGKLMSTDKAPLR b2/y13 ,20.35 SSGKLMpSTDKAPLR b7/y8 ,20.35 SSGKLMSpTDKAPLR b8/y7 ,","R","Q","20.35 SSGKLMpSTDKAPLR b7/y8 ,20.35 SSGKLMSpTDKAPLR b8/y7 ,",-777.777,"S1102",1,"T1103",1,"NaN",0,"SSGKLM(p)S(p)TDKAPLR","pept14811396",1]
["IPI00009286","Tax_Id=9606 Gene_Symbol=MLL Isoform 1 of Histone-lysine       N-methyltransferase HRX","SSIINEHMGSSSR",1579.5686,3,12,1579.5739,0,"1oxM 2pST",505,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",12,5140,5968,20.361,"6.96 pSpSIINEHMoxGSSSR b1/y13 b2/y12 b8/y6 ,20.11 pSSIINEHMoxGpSSSR b1/y13 b8/y6 b10/y4 ,20.36 SpSIINEHMoxGpSSSR b2/y12 b8/y6 b10/y4 ,19.39 pSSIINEHMoxGSpSSR b1/y13 b8/y6 b11/y3 ,19.62 SpSIINEHMoxGSpSSR b2/y12 b8/y6 b11/y3 ,13.67 SSIINEHMoxGpSpSSR b8/y6 b10/y4 b11/y3 ,19.16 pSSIINEHMoxGSSpSR b1/y13 b8/y6 b12/y2 ,19.39 SpSIINEHMoxGSSpSR b2/y12 b8/y6 b12/y2 ,13.50 SSIINEHMoxGpSSpSR b8/y6 b10/y4 b12/y2 ,10.59 SSIINEHMoxGSpSpSR b8/y6 b11/y3 b12/y2 ,","R","D","20.36 SpSIINEHMoxGpSSSR b2/y12 b8/y6 b10/y4 ,",-777.777,"S2411;S2412;S2420;S2421;S2422",5,"NaN",0,"NaN",0,"(p)S(p)SIINEHMG(p)S(p)S(p)SR","pept13887591",1]
["IPI00384577","Tax_Id=9606 Gene_Symbol=PLA2G4D Isoform 1 of Cytosolic       phospholipase A2 delta","SSRSNGWNGDNSAGYLTVPLRPLTIGK",3179.3314,5,11,3179.328,2.7,"3pST 1pY",402,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",11,7560,9492,21.4421,"21.44 pSpSRpSNGWNGDNSAGpYLTVPLRPLTIGK b1/y27 b2/y26 b4/y24 b15/y13 ,16.93 pSpSRSNGWNGDNpSAGpYLTVPLRPLTIGK b1/y27 b2/y26 b12/y16 b15/y13 ,17.18 pSSRpSNGWNGDNpSAGpYLTVPLRPLTIGK b1/y27 b4/y24 b12/y16 b15/y13 ,17.18 SpSRpSNGWNGDNpSAGpYLTVPLRPLTIGK b2/y26 b4/y24 b12/y16 b15/y13 ,7.66 pSpSRSNGWNGDNSAGpYLpTVPLRPLTIGK b1/y27 b2/y26 b15/y13 b17/y11 ,7.72 pSSRpSNGWNGDNSAGpYLpTVPLRPLTIGK b1/y27 b4/y24 b15/y13 b17/y11 ,7.72 SpSRpSNGWNGDNSAGpYLpTVPLRPLTIGK b2/y26 b4/y24 b15/y13 b17/y11 ,6.41 pSSRSNGWNGDNpSAGpYLpTVPLRPLTIGK b1/y27 b12/y16 b15/y13 b17/y11 ,6.41 SpSRSNGWNGDNpSAGpYLpTVPLRPLTIGK b2/y26 b12/y16 b15/y13 b17/y11 ,6.41 SSRpSNGWNGDNpSAGpYLpTVPLRPLTIGK b4/y24 b12/y16 b15/y13 b17/y11 ,6.47 pSpSRSNGWNGDNSAGpYLTVPLRPLpTIGK b1/y27 b2/y26 b15/y13 b24/y4 ,6.41 pSSRpSNGWNGDNSAGpYLTVPLRPLpTIGK b1/y27 b4/y24 b15/y13 b24/y4 ,6.41 SpSRpSNGWNGDNSAGpYLTVPLRPLpTIGK b2/y26 b4/y24 b15/y13 b24/y4 ,8.23 pSSRSNGWNGDNpSAGpYLTVPLRPLpTIGK b1/y27 b12/y16 b15/y13 b24/y4 ,8.23 SpSRSNGWNGDNpSAGpYLTVPLRPLpTIGK b2/y26 b12/y16 b15/y13 b24/y4 ,8.11 SSRpSNGWNGDNpSAGpYLTVPLRPLpTIGK b4/y24 b12/y16 b15/y13 b24/y4 ,8.23 pSSRSNGWNGDNSAGpYLpTVPLRPLpTIGK b1/y27 b15/y13 b17/y11 b24/y4 ,8.23 SpSRSNGWNGDNSAGpYLpTVPLRPLpTIGK b2/y26 b15/y13 b17/y11 b24/y4 ,8.11 SSRpSNGWNGDNSAGpYLpTVPLRPLpTIGK b4/y24 b15/y13 b17/y11 b24/y4 ,6.19 SSRSNGWNGDNpSAGpYLpTVPLRPLpTIGK b12/y16 b15/y13 b17/y11 b24/y4 ,","R","E","21.44 pSpSRpSNGWNGDNSAGpYLTVPLRPLTIGK b1/y27 b2/y26 b4/y24 b15/y13 ,",-777.777,"S225;S226;S228;S236",4,"NaN",0,"Y239",1,"pSpSRpSNGWNGDN(p)SAGpYLTVPLRPLTIGK","pept14282662",1]
["IPI00014055","Tax_Id=9606 Gene_Symbol=NAPSA Napsin-A","GDMKSSAR",946.3514,2,12,946.3579,0,"1oxM 1pST",328,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",12,8604,3016,20.5939,"20.59 GDMoxKpSSAR b3/y6 b5/y4 ,14.22 GDMoxKSpSAR b3/y6 b6/y3 ,","R","V","20.59 GDMoxKpSSAR b3/y6 b5/y4 ,",-777.777,"S392",1,"NaN",0,"NaN",0,"GDMKpSSAR","pept14282615",1]
["IPI00010331","Tax_Id=9606 Gene_Symbol=SIRT5 Isoform 2 of NAD-dependent       deacetylase sirtuin-5","NLLEIHGSLFKTRCTSCGVVAENYK",3055.3701,3,10,3055.3698,7.3,"2pST",209,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1000.raw",10,12599,6090,22.8205,"18.70 NLLEIHGpSLFKpTRCTSCGVVAENYK b8/y18 b12/y14 ,18.70 NLLEIHGpSLFKTRCpTSCGVVAENYK b8/y18 b15/y11 ,7.00 NLLEIHGSLFKpTRCpTSCGVVAENYK b12/y14 b15/y11 ,22.82 NLLEIHGpSLFKTRCTpSCGVVAENYK b8/y18 b16/y10 ,7.93 NLLEIHGSLFKpTRCTpSCGVVAENYK b12/y14 b16/y10 ,7.93 NLLEIHGSLFKTRCpTpSCGVVAENYK b15/y11 b16/y10 ,","K","S","22.82 NLLEIHGpSLFKTRCTpSCGVVAENYK b8/y18 b16/y10 ,",-777.777,"S160;S168",2,"NaN",0,"NaN",0,"NLLEIHGpSLFKTRCT(p)SCGVVAENYK","pept14555408",1]
["IPI00289776","Tax_Id=9606 Gene_Symbol=MYCBP2 MYC binding protein   2","VTSMTFLTGK",1163.536,2,12,1163.5298,0,"1pST",488,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",12,8896,4230,20.8361,"15.18 VpTSMTFLTGK b2/y9 ,15.49 VTpSMTFLTGK b3/y8 ,20.84 VTSMpTFLTGK b5/y6 ,10.83 VTSMTFLpTGK b8/y3 ,","K","A","20.84 VTSMpTFLTGK b5/y6 ,",-777.777,"NaN",0,"T3776",1,"NaN",0,"VTSMpTFLTGK","pept13887580",1]
["IPI00479240","Tax_Id=9606 Gene_Symbol=KIAA1841 Isoform 2 of       Uncharacterized protein KIAA1841","KSGLSSVLLMTVLLC",1779.8453,2,11,1779.8317,2,"2pST",724,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,9497,9221,21.9656,"17.04 KpSGLpSSVLLMTVLLC b2/y14 b5/y11 ,17.26 KpSGLSpSVLLMTVLLC b2/y14 b6/y10 ,21.97 KSGLpSpSVLLMTVLLC b5/y11 b6/y10 ,7.53 KpSGLSSVLLMpTVLLC b2/y14 b11/y5 ,6.60 KSGLpSSVLLMpTVLLC b5/y11 b11/y5 ,6.60 KSGLSpSVLLMpTVLLC b6/y10 b11/y5 ,","R","-","21.97 KSGLpSpSVLLMTVLLC b5/y11 b6/y10 ,",-777.777,"S697;S698;S694",3,"NaN",0,"NaN",0,"K(p)SGLpSpSVLLMTVLLC","pept98221940",1]
["IPI00020134","Tax_Id=9606 Gene_Symbol=SOS2 Son of sevenless homolog     2","QLTLLESDLYRK",1637.7401,3,13,1637.7467,7,"1pST 1pY",676,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,10638,8147,20.0435,"10.45 QLpTLLESDLpYRK b3/y10 b10/y3 ,20.04 QLTLLEpSDLpYRK b7/y6 b10/y3 ,","R","V","20.04 QLTLLEpSDLpYRK b7/y6 b10/y3 ,",-777.777,"S791",1,"NaN",0,"Y794",1,"QLTLLEpSDLpYRK","pept98221908",1]
["IPI00877669","Tax_Id=9606 Gene_Symbol=- 13 kDa protein","NQEVKTAMKK",1271.5903,2,10,1271.5945,9.4,"1oxM 1pST",741,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",10,10594,5997,23.0607,"23.06 NQEVKpTAMoxKK b6/y5 b8/y3 ,","R","K","23.06 NQEVKpTAMoxKK b6/y5 b8/y3 ,",-777.777,"NaN",0,"T98",1,"NaN",0,"NQEVKpTAMKK","pept98221954",1]
["IPI00000023","Tax_Id=9606 Gene_Symbol=GABRG2 Gamma-aminobutyric acid       receptor subunit gamma-2","SWRLYQFSFVGLR",1817.8075,2,13,1817.8055,3.7,"1pST 1pY",516,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",13,15511,7260,20.3545,"20.35 pSWRLpYQFSFVGLR b1/y13 b5/y9 ,11.89 SWRLpYQFpSFVGLR b5/y9 b8/y6 ,","R","N","20.35 pSWRLpYQFSFVGLR b1/y13 b5/y9 ,",-777.777,"S234",1,"NaN",0,"Y238",1,"pSWRLpYQFSFVGLR","pept13887600",1]
["IPI00015404","Tax_Id=9606 Gene_Symbol=ARID1B Isoform 1 of AT-rich       interactive domain-containing protein 1B","KSSSSTTTGEKITK",1533.724,2,12,1533.7287,0,"1pST",189,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",12,6183,3838,21.4421,"21.44 KpSSSSTTTGEKITK b2/y13 ,17.44 KSpSSSTTTGEKITK b3/y12 ,17.70 KSSpSSTTTGEKITK b4/y11 ,17.70 KSSSpSTTTGEKITK b5/y10 ,17.96 KSSSSpTTTGEKITK b6/y9 ,13.84 KSSSSTpTTGEKITK b7/y8 ,13.84 KSSSSTTpTGEKITK b8/y7 ,8.23 KSSSSTTTGEKIpTK b13/y2 ,","K","V","21.44 KpSSSSTTTGEKITK b2/y13 ,",-777.777,"S1034",1,"NaN",0,"NaN",0,"K(p)SSSSTTTGEKITK","pept14422662",1]
["IPI00220740","Tax_Id=9606 Gene_Symbol=NPM1 Isoform 2 of     Nucleophosmin","DELHIVEAEAMNYEGSPIK",2223.981,3,11,2223.9759,8.6,"1pST",319,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",11,10949,8942,22.4978,"22.50 DELHIVEAEAMNYEGpSPIK b16/y4 ,","K","V","22.50 DELHIVEAEAMNYEGpSPIK b16/y4 ,",-777.777,"S70",1,"NaN",0,"NaN",0,"DELHIVEAEAMNYEGpSPIK","pept13887505",1]
["IPI00180154","Tax_Id=9606 Gene_Symbol=ATXN2 Isoform 1 of   Ataxin-2","RSAAAAPR",878.4065,1,15,878.4123,14.6,"1pST",336,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",15,2959,2785,18.6197,"18.62 RpSAAAAPR b2/y7 ,","M","S","18.62 RpSAAAAPR b2/y7 ,",-777.777,"S3",1,"NaN",0,"NaN",0,"RpSAAAAPR","pept14811358",1]
["IPI00303576","Tax_Id=9606 Gene_Symbol=OR4C13 Olfactory receptor     4C13","NNVTEFILLGLTENPK",1880.9388,3,11,1880.9285,2.8,"1pST",691,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,13166,9947,22.7353,"22.74 NNVpTEFILLGLTENPK b4/y13 ,10.74 NNVTEFILLGLpTENPK b12/y5 ,","R","M","22.74 NNVpTEFILLGLTENPK b4/y13 ,",-777.777,"NaN",0,"T8",1,"NaN",0,"NNVpTEFILLGLTENPK","pept98221918",1]
["IPI00791803","Tax_Id=9606 Gene_Symbol=CILP cDNA, FLJ93876, highly similar       to Homo sapiens cartilage intermediate layer protein,       nucleotidepyrophosphohydrolase (CILP), mRNA","SKVAQLIVTASDETPCNPVPESYLIR",3126.4052,3,11,3126.3787,0,"3pST",502,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",11,7518,10471,22.8896,"6.35 pSKVAQLIVpTApSDETPCNPVPESYLIR b1/y26 b9/y18 b11/y16 ,22.50 pSKVAQLIVpTASDEpTPCNPVPESYLIR b1/y26 b9/y18 b14/y13 ,22.50 pSKVAQLIVTApSDEpTPCNPVPESYLIR b1/y26 b11/y16 b14/y13 ,22.89 SKVAQLIVpTApSDEpTPCNPVPESYLIR b9/y18 b11/y16 b14/y13 ,16.73 pSKVAQLIVpTASDETPCNPVPEpSYLIR b1/y26 b9/y18 b22/y5 ,16.73 pSKVAQLIVTApSDETPCNPVPEpSYLIR b1/y26 b11/y16 b22/y5 ,17.02 SKVAQLIVpTApSDETPCNPVPEpSYLIR b9/y18 b11/y16 b22/y5 ,0.00 pSKVAQLIVTASDEpTPCNPVPEpSYLIR b1/y26 b14/y13 b22/y5 ,0.00 SKVAQLIVpTASDEpTPCNPVPEpSYLIR b9/y18 b14/y13 b22/y5 ,0.00 SKVAQLIVTApSDEpTPCNPVPEpSYLIR b11/y16 b14/y13 b22/y5 ,","K","L","22.89 SKVAQLIVpTApSDEpTPCNPVPESYLIR b9/y18 b11/y16 b14/y13 ,",-777.777,"S387;S397",2,"T400;T395",2,"NaN",0,"(p)SKVAQLIV(p)TA(p)SDEpTPCNPVPESYLIR","pept14811458",1]
["IPI00233495","Tax_Id=9606 Gene_Symbol=- 35 kDa protein","YGVDLIRYTHEANTAVYSSNK",2560.0858,3,12,2560.1036,7.1,"1pST 1pY",401,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",12,9432,8259,21.9656,"9.01 pYGVDLIRYpTHEANTAVYSSNK b1/y21 b9/y13 ,6.49 YGVDLIRpYpTHEANTAVYSSNK b8/y14 b9/y13 ,14.19 YGVDLIRYpTHEANTAVpYSSNK b9/y13 b17/y5 ,18.91 pYGVDLIRYTHEANpTAVYSSNK b1/y21 b14/y8 ,11.76 YGVDLIRpYTHEANpTAVYSSNK b8/y14 b14/y8 ,11.07 YGVDLIRYTHEANpTAVpYSSNK b14/y8 b17/y5 ,21.97 pYGVDLIRYTHEANTAVYpSSNK b1/y21 b18/y4 ,14.19 YGVDLIRpYTHEANTAVYpSSNK b8/y14 b18/y4 ,8.54 YGVDLIRYTHEANTAVpYpSSNK b17/y5 b18/y4 ,21.69 pYGVDLIRYTHEANTAVYSpSNK b1/y21 b19/y3 ,14.01 YGVDLIRpYTHEANTAVYSpSNK b8/y14 b19/y3 ,8.47 YGVDLIRYTHEANTAVpYSpSNK b17/y5 b19/y3 ,","K","I","21.97 pYGVDLIRYTHEANTAVYpSSNK b1/y21 b18/y4 ,",-777.777,"S81;S82",2,"NaN",0,"Y64",1,"pYGVDLIRYTHEANTAVY(p)S(p)SNK","pept14282661",1]
["IPI00168123","Tax_Id=9606 Gene_Symbol=C2CD3 cDNA FLJ34770 fis, clone       NT2NE2002870","ELAANSSRSTTPRGK",1733.7466,2,15,1733.7498,0.3,"2pST",432,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",15,8971,6826,19.1551,"12.30 ELAANpSpSRSTTPRGK b6/y10 b7/y9 ,19.16 ELAANpSSRpSTTPRGK b6/y10 b9/y7 ,19.16 ELAANSpSRpSTTPRGK b7/y9 b9/y7 ,15.09 ELAANpSSRSpTTPRGK b6/y10 b10/y6 ,15.09 ELAANSpSRSpTTPRGK b7/y9 b10/y6 ,18.93 ELAANSSRpSpTTPRGK b9/y7 b10/y6 ,9.60 ELAANpSSRSTpTPRGK b6/y10 b11/y5 ,9.60 ELAANSpSRSTpTPRGK b7/y9 b11/y5 ,12.17 ELAANSSRpSTpTPRGK b9/y7 b11/y5 ,9.69 ELAANSSRSpTpTPRGK b10/y6 b11/y5 ,","K","D","19.16 ELAANpSSRpSTTPRGK b6/y10 b9/y7 ,19.16 ELAANSpSRpSTTPRGK b7/y9 b9/y7 ,",-777.777,"S232;S229;S230",3,"T233",1,"NaN",0,"ELAAN(p)S(p)SRpS(p)TTPRGK","pept13887542",1]
["IPI00016461","Tax_Id=9606 Gene_Symbol=PLCD1 phospholipase C, delta 1       isoform 1","FYKLQEDCKTIWQESR",2289.9335,4,12,2289.953,1.5,"1pST 1pY",538,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",12,6530,9210,22.4978,"22.50 FpYKLQEDCKpTIWQESR b2/y15 b10/y7 ,16.45 FpYKLQEDCKTIWQEpSR b2/y15 b15/y2 ,","R","K","22.50 FpYKLQEDCKpTIWQESR b2/y15 b10/y7 ,",-777.777,"NaN",0,"T71",1,"Y63",1,"FpYKLQEDCKpTIWQESR","pept13887613",1]
["IPI00329152","Tax_Id=9606 Gene_Symbol=MKL2 Isoform 2 of       MKL/myocardin-like protein 2","TENFLK",830.35,2,11,830.3575,5.7,"1pST",242,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",11,5284,2208,23.5424,"23.54 pTENFLK b1/y6 ,","R","H","23.54 pTENFLK b1/y6 ,",-777.777,"NaN",0,"T93",1,"NaN",0,"pTENFLK","pept14422688",1]
["IPI00023780","Tax_Id=9606 Gene_Symbol=DNAJC5 Isoform 2 of DnaJ homolog       subfamily C member 5","SLSTSGESLYHVLGLDK",1884.8789,2,11,1884.887,0,"1pST",105,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",11,11910,6956,23.7061,"18.27 pSLSTSGESLYHVLGLDK b1/y17 ,23.71 SLpSTSGESLYHVLGLDK b3/y15 ,18.27 SLSpTSGESLYHVLGLDK b4/y14 ,18.27 SLSTpSGESLYHVLGLDK b5/y13 ,18.94 SLSTSGEpSLYHVLGLDK b8/y10 ,","R","N","23.71 SLpSTSGESLYHVLGLDK b3/y15 ,",-777.777,"S10;S15",2,"NaN",0,"NaN",0,"SL(p)STSGE(p)SLYHVLGLDK","pept14811321",1]
["IPI00064238","Tax_Id=9606 Gene_Symbol=FEM1C Protein fem-1 homolog     C","YALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDR",4157.8176,5,11,4157.8114,6.9,"2oxM 1pST 1pY",207,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1000.raw",11,7265,6685,23.766,"19.43 pYALDMoxQQpSNLDPLSPMoxTASSLLSFAELFSFMLQDR b1/y35 b5/y31 b8/y28 b16/y20 ,19.43 pYALDMoxQQSNLDPLpSPMoxTASSLLSFAELFSFMLQDR b1/y35 b5/y31 b14/y22 b16/y20 ,11.91 pYALDMoxQQSNLDPLSPMoxpTASSLLSFAELFSFMLQDR b1/y35 b5/y31 b16/y20 b17/y19 ,9.19 pYALDMoxQQSNLDPLSPMoxTApSSLLSFAELFSFMLQDR b1/y35 b5/y31 b16/y20 b19/y17 ,6.47 pYALDMoxQQSNLDPLSPMoxTASpSLLSFAELFSFMLQDR b1/y35 b5/y31 b16/y20 b20/y16 ,6.93 pYALDMoxQQSNLDPLSPMoxTASSLLpSFAELFSFMLQDR b1/y35 b5/y31 b16/y20 b23/y13 ,6.49 pYALDMoxQQSNLDPLSPMoxTASSLLSFAELFpSFMLQDR b1/y35 b5/y31 b16/y20 b29/y7 ,11.76 pYALDMoxQQpSNLDPLSPMTASSLLSFAELFSFMoxLQDR b1/y35 b5/y31 b8/y28 b31/y5 ,11.76 pYALDMoxQQSNLDPLpSPMTASSLLSFAELFSFMoxLQDR b1/y35 b5/y31 b14/y22 b31/y5 ,9.10 pYALDMoxQQSNLDPLSPMpTASSLLSFAELFSFMoxLQDR b1/y35 b5/y31 b17/y19 b31/y5 ,11.76 pYALDMoxQQSNLDPLSPMTApSSLLSFAELFSFMoxLQDR b1/y35 b5/y31 b19/y17 b31/y5 ,15.15 pYALDMoxQQSNLDPLSPMTASpSLLSFAELFSFMoxLQDR b1/y35 b5/y31 b20/y16 b31/y5 ,15.15 pYALDMoxQQSNLDPLSPMTASSLLpSFAELFSFMoxLQDR b1/y35 b5/y31 b23/y13 b31/y5 ,11.91 pYALDMoxQQSNLDPLSPMTASSLLSFAELFpSFMoxLQDR b1/y35 b5/y31 b29/y7 b31/y5 ,8.92 pYALDMQQpSNLDPLSPMoxTASSLLSFAELFSFMoxLQDR b1/y35 b8/y28 b16/y20 b31/y5 ,11.76 pYALDMQQSNLDPLpSPMoxTASSLLSFAELFSFMoxLQDR b1/y35 b14/y22 b16/y20 b31/y5 ,15.15 pYALDMQQSNLDPLSPMoxpTASSLLSFAELFSFMoxLQDR b1/y35 b16/y20 b17/y19 b31/y5 ,19.17 pYALDMQQSNLDPLSPMoxTApSSLLSFAELFSFMoxLQDR b1/y35 b16/y20 b19/y17 b31/y5 ,23.77 pYALDMQQSNLDPLSPMoxTASpSLLSFAELFSFMoxLQDR b1/y35 b16/y20 b20/y16 b31/y5 ,23.77 pYALDMQQSNLDPLSPMoxTASSLLpSFAELFSFMoxLQDR b1/y35 b16/y20 b23/y13 b31/y5 ,19.43 pYALDMQQSNLDPLSPMoxTASSLLSFAELFpSFMoxLQDR b1/y35 b16/y20 b29/y7 b31/y5 ,","K","A","23.77 pYALDMQQSNLDPLSPMoxTASpSLLSFAELFSFMoxLQDR b1/y35 b16/y20 b20/y16 b31/y5 ,23.77 pYALDMQQSNLDPLSPMoxTASSLLpSFAELFSFMoxLQDR b1/y35 b16/y20 b23/y13 b31/y5 ,",-777.777,"S382;S385",2,"NaN",0,"Y363",1,"pYALDMQQSNLDPLSPMTAS(p)SLL(p)SFAELFSFMLQDR","pept14555406",1]
["IPI00399036","Tax_Id=9606 Gene_Symbol=hCG_1984468 hypothetical protein       LOC389672","SGALDVLQMKEEDVLK",1853.8872,2,14,1853.8846,4,"1pST",166,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",14,14355,4686,21.0318,"21.03 pSGALDVLQMKEEDVLK b1/y16 ,","M","F","21.03 pSGALDVLQMKEEDVLK b1/y16 ,",-777.777,"S2",1,"NaN",0,"NaN",0,"pSGALDVLQMKEEDVLK","pept14422653",1]
["IPI00045208","Tax_Id=9606 Gene_Symbol=ZNF300 cDNA FLJ55483, highly       similar to Zinc finger protein 300","SNLHNSQSCILGTVSFHHKILKGVTR",3012.5288,4,14,3012.5117,0,"1pST",287,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",14,12948,9275,21.0479,"20.81 pSNLHNSQSCILGTVSFHHKILKGVTR b1/y26 ,21.05 SNLHNpSQSCILGTVSFHHKILKGVTR b6/y21 ,21.05 SNLHNSQpSCILGTVSFHHKILKGVTR b8/y19 ,7.71 SNLHNSQSCILGpTVSFHHKILKGVTR b13/y14 ,7.71 SNLHNSQSCILGTVpSFHHKILKGVTR b15/y12 ,9.43 SNLHNSQSCILGTVSFHHKILKGVpTR b25/y2 ,","K","D","21.05 SNLHNpSQSCILGTVSFHHKILKGVTR b6/y21 ,21.05 SNLHNSQpSCILGTVSFHHKILKGVTR b8/y19 ,",-777.777,"S108;S113;S115",3,"NaN",0,"NaN",0,"(p)SNLHN(p)SQ(p)SCILGTVSFHHKILKGVTR","pept14282597",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7409,2,11,1733.7444,5.9,"1pST",559,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,9613,8861,24.1511,"18.81 NQEpSLGSPHICDLGK b4/y12 ,24.15 NQESLGpSPHICDLGK b7/y9 ,","R","V","24.15 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept98221839",1]
["IPI00374301","Tax_Id=9606 Gene_Symbol=LOC100128918 hypothetical       protein","QLPNAGPGAPPALGFSR",1728.8204,3,14,1728.8349,13.6,"1pST",171,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",14,8402,4344,21.3838,"21.38 QLPNAGPGAPPALGFpSR b16/y2 ,","R","F","21.38 QLPNAGPGAPPALGFpSR b16/y2 ,",-777.777,"S789",1,"NaN",0,"NaN",0,"QLPNAGPGAPPALGFpSR","pept14422657",1]
["IPI00180154","Tax_Id=9606 Gene_Symbol=ATXN2 Isoform 1 of   Ataxin-2","RSAAAAPR",878.4104,1,15,878.4123,14.9,"1pST",336,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",15,3350,2786,20.4666,"20.47 RpSAAAAPR b2/y7 ,","M","S","20.47 RpSAAAAPR b2/y7 ,",-777.777,"S3",1,"NaN",0,"NaN",0,"RpSAAAAPR","pept14811359",1]
["IPI00394751","Tax_Id=9606 Gene_Symbol=FAM120C Isoform 1 of Constitutive       coactivator of PPAR-gamma-like protein 2","CPGAVVPVDLLKLARTVSR",2130.1496,4,10,2130.1384,6.7,"1pST",765,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",10,10948,11629,25.4842,"20.04 CPGAVVPVDLLKLARpTVSR b16/y4 ,25.48 CPGAVVPVDLLKLARTVpSR b18/y2 ,","R","Q","25.48 CPGAVVPVDLLKLARTVpSR b18/y2 ,",-777.777,"S31",1,"NaN",0,"NaN",0,"CPGAVVPVDLLKLARTVpSR","pept98221968",1]
["IPI00170791","Tax_Id=9606 Gene_Symbol=INADL Isoform 2 of InaD-like       protein","SPLFNQILTLQQSIKQLK",2258.1655,4,12,2258.1476,5.2,"2pST",145,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1000.raw",12,10345,4884,23.5528,"8.25 pSPLFNQILpTLQQSIKQLK b1/y18 b9/y10 ,11.92 pSPLFNQILTLQQpSIKQLK b1/y18 b13/y6 ,23.55 SPLFNQILpTLQQpSIKQLK b9/y10 b13/y6 ,","K","G","23.55 SPLFNQILpTLQQpSIKQLK b9/y10 b13/y6 ,",-777.777,"S56",1,"T52",1,"NaN",0,"SPLFNQILpTLQQpSIKQLK","pept14555371",1]
["IPI00888841","Tax_Id=9606 Gene_Symbol=LOC100132177 similar to       mCG130077","AGTLPLRSSR",1216.5388,2,16,1216.5366,6.1,"2pST",241,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",16,10927,3794,19.6656,"19.67 AGpTLPLRpSSR b3/y8 b8/y3 ,19.67 AGpTLPLRSpSR b3/y8 b9/y2 ,10.27 AGTLPLRpSpSR b8/y3 b9/y2 ,","R","N","19.67 AGpTLPLRpSSR b3/y8 b8/y3 ,19.67 AGpTLPLRSpSR b3/y8 b9/y2 ,",-777.777,"S24;S25",2,"T19",1,"NaN",0,"AGpTLPLR(p)S(p)SR","pept14282587",1]
["IPI00168123","Tax_Id=9606 Gene_Symbol=C2CD3 cDNA FLJ34770 fis, clone       NT2NE2002870","ELAANSSRSTTPRGK",1733.7534,2,13,1733.7498,0,"2pST",432,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",13,8776,6833,23.0913,"12.30 ELAANpSpSRSTTPRGK b6/y10 b7/y9 ,12.30 ELAANpSSRpSTTPRGK b6/y10 b9/y7 ,15.45 ELAANSpSRpSTTPRGK b7/y9 b9/y7 ,9.60 ELAANpSSRSpTTPRGK b6/y10 b10/y6 ,12.03 ELAANSpSRSpTTPRGK b7/y9 b10/y6 ,23.09 ELAANSSRpSpTTPRGK b9/y7 b10/y6 ,9.60 ELAANpSSRSTpTPRGK b6/y10 b11/y5 ,12.03 ELAANSpSRSTpTPRGK b7/y9 b11/y5 ,23.09 ELAANSSRpSTpTPRGK b9/y7 b11/y5 ,23.09 ELAANSSRSpTpTPRGK b10/y6 b11/y5 ,","K","D","23.09 ELAANSSRpSpTTPRGK b9/y7 b10/y6 ,23.09 ELAANSSRpSTpTPRGK b9/y7 b11/y5 ,23.09 ELAANSSRSpTpTPRGK b10/y6 b11/y5 ,",-777.777,"S232",1,"T233;T234",2,"NaN",0,"ELAANSSR(p)S(p)T(p)TPRGK","pept13887541",1]
["IPI00303335","Tax_Id=9606 Gene_Symbol=NEB Nebulin","TKAKSINYCETPK",1618.731,2,11,1618.7426,0,"1pST",570,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",11,10558,6140,25.303,"24.15 pTKAKSINYCETPK b1/y13 ,25.30 TKAKpSINYCETPK b5/y9 ,6.53 TKAKSINYCEpTPK b11/y3 ,","K","F","25.30 TKAKpSINYCETPK b5/y9 ,",-777.777,"S398",1,"T394",1,"NaN",0,"(p)TKAK(p)SINYCETPK","pept13887641",1]
["IPI00886876","Tax_Id=9606 Gene_Symbol=FAM66A similar to   hCG1990697","RPPYSAPSGRQYQPEAGYPR",2516.0258,4,14,2516.0076,0,"1pST 2pY",439,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",14,13198,9125,22.5853,"8.12 RPPpYpSAPSGRQpYQPEAGYPR b4/y17 b5/y16 b12/y9 ,16.45 RPPpYpSAPSGRQYQPEAGpYPR b4/y17 b5/y16 b18/y3 ,22.13 RPPYpSAPSGRQpYQPEAGpYPR b5/y16 b12/y9 b18/y3 ,8.12 RPPpYSAPpSGRQpYQPEAGYPR b4/y17 b8/y13 b12/y9 ,16.45 RPPpYSAPpSGRQYQPEAGpYPR b4/y17 b8/y13 b18/y3 ,22.59 RPPYSAPpSGRQpYQPEAGpYPR b8/y13 b12/y9 b18/y3 ,","R","W","22.59 RPPYSAPpSGRQpYQPEAGpYPR b8/y13 b12/y9 b18/y3 ,",-777.777,"S64;S67",2,"NaN",0,"Y71;Y77",2,"RPPY(p)SAP(p)SGRQpYQPEAGpYPR","pept14811414",1]
["IPI00000057","Tax_Id=9606 Gene_Symbol=COG2 Conserved oligomeric Golgi       complex subunit 2","MSKQEDIR",1085.4483,2,21,1085.4576,14.3,"1pST",383,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",21,13604,3841,15.7261,"15.73 MpSKQEDIR b2/y7 ,","R","K","15.73 MpSKQEDIR b2/y7 ,",-777.777,"S118",1,"NaN",0,"NaN",0,"MpSKQEDIR","pept13887511",1]
["IPI00647635","Tax_Id=9606 Gene_Symbol=GIGYF2 Isoform 2 of PERQ amino       acid-rich with GYF domain-containing protein 2","ALSSGGSITSPPLSPALPK",1858.9364,2,11,1858.9441,0,"1pST",461,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,8509,9784,25.7518,"10.37 ALpSSGGSITSPPLSPALPK b3/y17 ,10.37 ALSpSGGSITSPPLSPALPK b4/y16 ,13.34 ALSSGGpSITSPPLSPALPK b7/y13 ,21.14 ALSSGGSIpTSPPLSPALPK b9/y11 ,25.75 ALSSGGSITpSPPLSPALPK b10/y10 ,13.34 ALSSGGSITSPPLpSPALPK b14/y6 ,","R","Y","25.75 ALSSGGSITpSPPLSPALPK b10/y10 ,",-777.777,"S26",1,"T25",1,"NaN",0,"ALSSGGSI(p)T(p)SPPLSPALPK","pept98221802",1]
["IPI00022689","Tax_Id=9606 Gene_Symbol=C21orf116 Uncharacterized protein       C21orf116","MMVLTPFWLGRDCPSR",2060.9038,4,10,2060.9036,0,"1oxM 1pST",259,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",10,7104,5436,26.9141,"6.06 MoxMVLpTPFWLGRDCPSR b1/y16 b5/y12 ,26.91 MoxMVLTPFWLGRDCPpSR b1/y16 b15/y2 ,6.06 MMoxVLpTPFWLGRDCPSR b2/y15 b5/y12 ,26.91 MMoxVLTPFWLGRDCPpSR b2/y15 b15/y2 ,","-","G","26.91 MoxMVLTPFWLGRDCPpSR b1/y16 b15/y2 ,26.91 MMoxVLTPFWLGRDCPpSR b2/y15 b15/y2 ,",-777.777,"S15",1,"NaN",0,"NaN",0,"MMVLTPFWLGRDCPpSR","pept14422700",1]
["IPI00396171","Tax_Id=9606 Gene_Symbol=MAP4 Isoform 1 of       Microtubule-associated protein 4","DMESPTKLDVTLAK",1626.7534,3,20,1626.7576,3.4,"1pST",32,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",20,7606,6210,17.0235,"16.73 DMEpSPTKLDVTLAK b4/y11 ,17.02 DMESPpTKLDVTLAK b6/y9 ,12.08 DMESPTKLDVpTLAK b11/y4 ,","K","D","17.02 DMESPpTKLDVTLAK b6/y9 ,",-777.777,"S280",1,"T282",1,"NaN",0,"DME(p)SP(p)TKLDVTLAK","pept13887489",1]
["IPI00021812","Tax_Id=9606 Gene_Symbol=AHNAK Neuroblast       differentiation-associated protein AHNAK","LKSEDGVEGDLGETQSR",1898.8277,3,14,1898.8259,14.5,"1pST",1,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",14,3812,7654,23.1423,"23.14 LKpSEDGVEGDLGETQSR b3/y15 ,9.01 LKSEDGVEGDLGEpTQSR b14/y4 ,8.84 LKSEDGVEGDLGETQpSR b16/y2 ,","R","T","23.14 LKpSEDGVEGDLGETQSR b3/y15 ,",-777.777,"S135",1,"NaN",0,"NaN",0,"LKpSEDGVEGDLGETQSR","pept13887484",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7419,2,13,1733.7444,3.3,"1pST",559,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,7742,8877,24.1511,"14.26 NQEpSLGSPHICDLGK b4/y12 ,24.15 NQESLGpSPHICDLGK b7/y9 ,","R","V","24.15 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept98221833",1]
["IPI00180707","Tax_Id=9606 Gene_Symbol=FREM2 Isoform 1 of FRAS1-related       extracellular matrix protein 2","SRAGIAISAFNLK",1426.7271,2,10,1426.7333,7.5,"1pST",382,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",10,7221,4462,27.4845,"5.60 pSRAGIAISAFNLK b1/y13 ,27.48 SRAGIAIpSAFNLK b8/y6 ,","K","D","27.48 SRAGIAIpSAFNLK b8/y6 ,",-777.777,"S1134",1,"NaN",0,"NaN",0,"SRAGIAIpSAFNLK","pept14282650",1]
["IPI00007764","Tax_Id=9606 Gene_Symbol=HN1 Isoform 1 of Hematological and       neurological expressed 1 protein","RNSSEASSGDFLDLK",1704.7312,2,13,1704.7356,1.2,"1pST",449,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,7113,8669,24.5697,"18.94 RNpSSEASSGDFLDLK b3/y13 ,24.57 RNSpSEASSGDFLDLK b4/y12 ,24.57 RNSSEApSSGDFLDLK b7/y9 ,24.57 RNSSEASpSGDFLDLK b8/y8 ,","R","G","24.57 RNSpSEASSGDFLDLK b4/y12 ,24.57 RNSSEApSSGDFLDLK b7/y9 ,24.57 RNSSEASpSGDFLDLK b8/y8 ,",-777.777,"S88;S91;S92",3,"NaN",0,"NaN",0,"RNS(p)SEA(p)S(p)SGDFLDLK","pept98221798",1]
["IPI00148059","Tax_Id=9606 Gene_Symbol=IL17RB Isoform 1 of Interleukin-17       receptor B","TSFSTTTLLPPIK",1564.7093,2,14,1564.7191,0,"2pST",454,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",14,8414,5906,23.766,"18.42 pTpSFSTTTLLPPIK b1/y13 b2/y12 ,18.42 pTSFpSTTTLLPPIK b1/y13 b4/y10 ,18.66 TpSFpSTTTLLPPIK b2/y12 b4/y10 ,23.14 pTSFSpTTTLLPPIK b1/y13 b5/y9 ,23.45 TpSFSpTTTLLPPIK b2/y12 b5/y9 ,19.43 TSFpSpTTTLLPPIK b4/y10 b5/y9 ,23.45 pTSFSTpTTLLPPIK b1/y13 b6/y8 ,23.77 TpSFSTpTTLLPPIK b2/y12 b6/y8 ,19.70 TSFpSTpTTLLPPIK b4/y10 b6/y8 ,15.56 TSFSpTpTTLLPPIK b5/y9 b6/y8 ,23.45 pTSFSTTpTLLPPIK b1/y13 b7/y7 ,23.77 TpSFSTTpTLLPPIK b2/y12 b7/y7 ,19.70 TSFpSTTpTLLPPIK b4/y10 b7/y7 ,15.56 TSFSpTTpTLLPPIK b5/y9 b7/y7 ,19.98 TSFSTpTpTLLPPIK b6/y8 b7/y7 ,","K","V","23.77 TpSFSTpTTLLPPIK b2/y12 b6/y8 ,23.77 TpSFSTTpTLLPPIK b2/y12 b7/y7 ,",-777.777,"S322",1,"T321;T325;T326;T327",4,"NaN",0,"(p)T(p)SFS(p)T(p)T(p)TLLPPIK","pept13887558",1]
["IPI00004533","Tax_Id=9606 Gene_Symbol=KIF3B Kinesin-like protein       KIF3B","DLLSKDQTK",1126.5162,2,15,1126.5271,8.9,"1pST",440,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",15,6859,4038,23.0607,"23.06 DLLpSKDQTK b4/y6 ,11.92 DLLSKDQpTK b8/y2 ,","R","R","23.06 DLLpSKDQTK b4/y6 ,",-777.777,"S157",1,"NaN",0,"NaN",0,"DLLpSKDQTK","pept13887546",1]
["IPI00413140","Tax_Id=9606 Gene_Symbol=DNM1 Isoform 1 of   Dynamin-1","CVDMVISELISTVR",1700.7994,3,10,1700.7878,0.2,"1pST",251,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",10,7490,4259,28.0864,"8.00 CVDMVIpSELISTVR b7/y8 ,28.09 CVDMVISELIpSTVR b11/y4 ,27.68 CVDMVISELISpTVR b12/y3 ,","K","Q","28.09 CVDMVISELIpSTVR b11/y4 ,",-777.777,"S437",1,"T438",1,"NaN",0,"CVDMVISELI(p)S(p)TVR","pept14422693",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","YSPSQNSPIHHIPSR",1878.7775,3,14,1878.7815,0,"2pST",49,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",14,4244,9913,24.0872,"14.95 YpSPpSQNSPIHHIPSR b2/y14 b4/y12 ,24.09 YpSPSQNpSPIHHIPSR b2/y14 b7/y9 ,19.98 YSPpSQNpSPIHHIPSR b4/y12 b7/y9 ,14.75 YpSPSQNSPIHHIPpSR b2/y14 b14/y2 ,11.76 YSPpSQNSPIHHIPpSR b4/y12 b14/y2 ,9.28 YSPSQNpSPIHHIPpSR b7/y9 b14/y2 ,","R","R","24.09 YpSPSQNpSPIHHIPSR b2/y14 b7/y9 ,",-777.777,"S290;S285;S287",3,"NaN",0,"NaN",0,"Y(p)SP(p)SQNpSPIHHIPSR","pept98221704",1]
["IPI00411425","Tax_Id=9606 Gene_Symbol=CERKL Isoform 2 of Ceramide       kinase-like protein","LHPRLISLYGGSMEEMIPK",2266.0702,2,10,2266.0891,2.2,"1oxM 1pST",583,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",10,13473,9084,28.5026,"28.50 LHPRLIpSLYGGSMoxEEMIPK b7/y13 b13/y7 ,11.76 LHPRLISLYGGpSMoxEEMIPK b12/y8 b13/y7 ,28.50 LHPRLIpSLYGGSMEEMoxIPK b7/y13 b16/y4 ,11.76 LHPRLISLYGGpSMEEMoxIPK b12/y8 b16/y4 ,","R","-","28.50 LHPRLIpSLYGGSMoxEEMIPK b7/y13 b13/y7 ,28.50 LHPRLIpSLYGGSMEEMoxIPK b7/y13 b16/y4 ,",-777.777,"S520",1,"NaN",0,"NaN",0,"LHPRLIpSLYGGSMEEMIPK","pept13887654",1]
["IPI00021812","Tax_Id=9606 Gene_Symbol=AHNAK Neuroblast       differentiation-associated protein AHNAK","LKSEDGVEGDLGETQSR",1898.8194,3,19,1898.8259,16.9,"1pST",1,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",19,3896,7652,19.7035,"19.70 LKpSEDGVEGDLGETQSR b3/y15 ,6.72 LKSEDGVEGDLGEpTQSR b14/y4 ,6.86 LKSEDGVEGDLGETQpSR b16/y2 ,","R","T","19.70 LKpSEDGVEGDLGETQSR b3/y15 ,",-777.777,"S135",1,"NaN",0,"NaN",0,"LKpSEDGVEGDLGETQSR","pept13887486",1]
["IPI00017526","Tax_Id=9606 Gene_Symbol=S100P Protein   S100-P","TELETAMGMIIDVFSR",1907.825,2,14,1907.841,4.4,"1oxM 1pST",112,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",14,18516,7708,24.749,"24.75 pTELETAMoxGMIIDVFSR b1/y16 b7/y10 ,16.93 TELEpTAMoxGMIIDVFSR b5/y12 b7/y10 ,6.42 TELETAMoxGMIIDVFpSR b7/y10 b15/y2 ,24.75 pTELETAMGMoxIIDVFSR b1/y16 b9/y8 ,16.93 TELEpTAMGMoxIIDVFSR b5/y12 b9/y8 ,6.66 TELETAMGMoxIIDVFpSR b9/y8 b15/y2 ,","M","Y","24.75 pTELETAMoxGMIIDVFSR b1/y16 b7/y10 ,24.75 pTELETAMGMoxIIDVFSR b1/y16 b9/y8 ,",-777.777,"NaN",0,"T2",1,"NaN",0,"pTELETAMGMIIDVFSR","pept13887493",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7423,2,13,1733.7444,5.3,"1pST",416,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",13,7343,6811,26.1182,"20.69 NQEpSLGSPHICDLGK b4/y12 ,26.12 NQESLGpSPHICDLGK b7/y9 ,","R","V","26.12 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept13887528",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7461,2,10,1733.7444,3.9,"1pST",416,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",10,7867,6823,29.3479,"23.43 NQEpSLGSPHICDLGK b4/y12 ,29.35 NQESLGpSPHICDLGK b7/y9 ,","R","V","29.35 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept13887529",1]
["IPI00217847","Tax_Id=9606 Gene_Symbol=C7orf61 Uncharacterized protein       C7orf61","SSVSSASVSSQVR",1519.5467,3,18,1519.5358,6.1,"3pST",399,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",18,4390,5719,21.4421,"9.38 pSpSVpSSASVSSQVR b1/y13 b2/y12 b4/y10 ,9.38 pSpSVSpSASVSSQVR b1/y13 b2/y12 b5/y9 ,7.49 pSSVpSpSASVSSQVR b1/y13 b4/y10 b5/y9 ,7.55 SpSVpSpSASVSSQVR b2/y12 b4/y10 b5/y9 ,7.40 pSpSVSSApSVSSQVR b1/y13 b2/y12 b7/y7 ,6.42 pSSVpSSApSVSSQVR b1/y13 b4/y10 b7/y7 ,6.42 SpSVpSSApSVSSQVR b2/y12 b4/y10 b7/y7 ,7.60 pSSVSpSApSVSSQVR b1/y13 b5/y9 b7/y7 ,7.66 SpSVSpSApSVSSQVR b2/y12 b5/y9 b7/y7 ,17.44 SSVpSpSApSVSSQVR b4/y10 b5/y9 b7/y7 ,7.36 pSpSVSSASVpSSQVR b1/y13 b2/y12 b9/y5 ,6.43 pSSVpSSASVpSSQVR b1/y13 b4/y10 b9/y5 ,6.42 SpSVpSSASVpSSQVR b2/y12 b4/y10 b9/y5 ,7.55 pSSVSpSASVpSSQVR b1/y13 b5/y9 b9/y5 ,7.60 SpSVSpSASVpSSQVR b2/y12 b5/y9 b9/y5 ,17.18 SSVpSpSASVpSSQVR b4/y10 b5/y9 b9/y5 ,6.42 pSSVSSApSVpSSQVR b1/y13 b7/y7 b9/y5 ,6.41 SpSVSSApSVpSSQVR b2/y12 b7/y7 b9/y5 ,13.25 SSVpSSApSVpSSQVR b4/y10 b7/y7 b9/y5 ,10.32 SSVSpSApSVpSSQVR b5/y9 b7/y7 b9/y5 ,7.36 pSpSVSSASVSpSQVR b1/y13 b2/y12 b10/y4 ,6.43 pSSVpSSASVSpSQVR b1/y13 b4/y10 b10/y4 ,6.42 SpSVpSSASVSpSQVR b2/y12 b4/y10 b10/y4 ,7.55 pSSVSpSASVSpSQVR b1/y13 b5/y9 b10/y4 ,7.60 SpSVSpSASVSpSQVR b2/y12 b5/y9 b10/y4 ,17.18 SSVpSpSASVSpSQVR b4/y10 b5/y9 b10/y4 ,6.42 pSSVSSApSVSpSQVR b1/y13 b7/y7 b10/y4 ,6.41 SpSVSSApSVSpSQVR b2/y12 b7/y7 b10/y4 ,13.25 SSVpSSApSVSpSQVR b4/y10 b7/y7 b10/y4 ,10.32 SSVSpSApSVSpSQVR b5/y9 b7/y7 b10/y4 ,9.59 pSSVSSASVpSpSQVR b1/y13 b9/y5 b10/y4 ,9.70 SpSVSSASVpSpSQVR b2/y12 b9/y5 b10/y4 ,21.44 SSVpSSASVpSpSQVR b4/y10 b9/y5 b10/y4 ,17.44 SSVSpSASVpSpSQVR b5/y9 b9/y5 b10/y4 ,17.96 SSVSSApSVpSpSQVR b7/y7 b9/y5 b10/y4 ,","K","T","21.44 SSVpSSASVpSpSQVR b4/y10 b9/y5 b10/y4 ,",-777.777,"S133;S134;S136;S138;S139",5,"NaN",0,"NaN",0,"SSV(p)S(p)SA(p)SV(p)S(p)SQVR","pept13887514",1]
["IPI00879575","Tax_Id=9606 Gene_Symbol=- 71 kDa protein","DAGMLFTVQLLTAR",1710.7601,4,13,1710.7453,3.6,"1oxM 2pST",607,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,14964,8722,26.9614,"26.96 DAGMoxLFpTVQLLpTAR b4/y11 b7/y8 b12/y3 ,","K","A","26.96 DAGMoxLFpTVQLLpTAR b4/y11 b7/y8 b12/y3 ,",-777.777,"NaN",0,"T550;T555",2,"NaN",0,"DAGMLFpTVQLLpTAR","pept98221869",1]
["IPI00646541","Tax_Id=9606 Gene_Symbol=TMEM200A Transmembrane protein       200A","MIATGGVITGLAALKRQDSAR",2288.0978,2,17,2288.1113,13.6,"2pST",413,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",17,9365,9199,23.0913,"9.87 MIApTGGVIpTGLAALKRQDSAR b4/y18 b9/y13 ,23.09 MIApTGGVITGLAALKRQDpSAR b4/y18 b19/y3 ,12.17 MIATGGVIpTGLAALKRQDpSAR b9/y13 b19/y3 ,","-","S","23.09 MIApTGGVITGLAALKRQDpSAR b4/y18 b19/y3 ,",-777.777,"S19",1,"T4",1,"NaN",0,"MIApTGGVITGLAALKRQDpSAR","pept13887526",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.742,2,16,1733.7444,2.5,"1pST",416,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",16,8322,6810,24.1511,"18.81 NQEpSLGSPHICDLGK b4/y12 ,24.15 NQESLGpSPHICDLGK b7/y9 ,","R","V","24.15 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept13887531",1]
["IPI00793443","Tax_Id=9606 Gene_Symbol=IPO5 importin 5","HLHSIMVLK",1156.5735,2,14,1156.5828,12.9,"1pST",364,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",14,10386,3814,26.2996,"26.30 HLHpSIMVLK b4/y6 ,","K","L","26.30 HLHpSIMVLK b4/y6 ,",-777.777,"S509",1,"NaN",0,"NaN",0,"HLHpSIMVLK","pept14811369",1]
["IPI00025880","Tax_Id=9606 Gene_Symbol=MYH7 Myosin-7","EMASMKEEFTR",1469.5459,2,10,1469.5567,1.1,"2oxM 1pST",550,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",10,5561,5460,30.3372,"30.34 EMoxApSMoxKEEFTR b2/y10 b4/y8 b5/y7 ,9.63 EMoxASMoxKEEFpTR b2/y10 b5/y7 b10/y2 ,","K","L","30.34 EMoxApSMoxKEEFTR b2/y10 b4/y8 b5/y7 ,",-777.777,"S851",1,"NaN",0,"NaN",0,"EMApSMKEEFTR","pept13887624",1]
["IPI00008918","Tax_Id=9606 Gene_Symbol=LIMA1 Isoform Beta of LIM domain       and actin-binding protein 1","ETPHSPGVEDAPIAK",1626.7373,2,14,1626.729,0.8,"1pST",585,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",14,3668,8068,26.5408,"20.03 EpTPHSPGVEDAPIAK b2/y14 ,26.54 ETPHpSPGVEDAPIAK b5/y11 ,","R","V","26.54 ETPHpSPGVEDAPIAK b5/y11 ,",-777.777,"S490",1,"NaN",0,"NaN",0,"ETPHpSPGVEDAPIAK","pept98221852",1]
["IPI00401598","Tax_Id=9606 Gene_Symbol=- 12 kDa protein","MASMYRRHK",1370.505,2,11,1370.5025,10.9,"2oxM 1pST 1pY",360,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",11,6854,4340,29.6382,"29.64 MoxApSMoxpYRRHK b1/y9 b3/y7 b4/y6 b5/y5 ,","-","T","29.64 MoxApSMoxpYRRHK b1/y9 b3/y7 b4/y6 b5/y5 ,",-777.777,"S3",1,"NaN",0,"Y5",1,"MApSMpYRRHK","pept14282636",1]
["IPI00175416","Tax_Id=9606 Gene_Symbol=PLCH1 Isoform 1 of       1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase   eta-1","LDLSSVDTGECKQLPSPQSLKGK",2566.2243,4,11,2566.235,4.2,"1pST",221,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",11,11239,6471,29.74,"10.87 LDLpSSVDTGECKQLPSPQSLKGK b4/y20 ,7.95 LDLSpSVDTGECKQLPSPQSLKGK b5/y19 ,7.03 LDLSSVDpTGECKQLPSPQSLKGK b8/y16 ,25.44 LDLSSVDTGECKQLPpSPQSLKGK b16/y8 ,29.74 LDLSSVDTGECKQLPSPQpSLKGK b19/y5 ,","K","I","29.74 LDLSSVDTGECKQLPSPQpSLKGK b19/y5 ,",-777.777,"S431;S434",2,"NaN",0,"NaN",0,"LDLSSVDTGECKQLP(p)SPQ(p)SLKGK","pept14422677",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7424,2,17,1733.7444,2.7,"1pST",416,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",17,8772,6812,23.7848,"14.26 NQEpSLGSPHICDLGK b4/y12 ,23.78 NQESLGpSPHICDLGK b7/y9 ,","R","V","23.78 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept13887533",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7424,2,11,1733.7444,9.7,"1pST",559,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,10318,8889,30.2363,"19.40 NQEpSLGSPHICDLGK b4/y12 ,30.24 NQESLGpSPHICDLGK b7/y9 ,","R","V","30.24 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept98221840",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7511,2,11,1733.7444,4.7,"1pST",416,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",11,8097,6832,30.2363,"19.40 NQEpSLGSPHICDLGK b4/y12 ,30.24 NQESLGpSPHICDLGK b7/y9 ,","R","V","30.24 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept13887530",1]
["IPI00021448","Tax_Id=9606 Gene_Symbol=PIK3R1 Isoform 1 of       Phosphatidylinositol 3-kinase regulatory subunit alpha","VLSEIFSPMLFR",1533.7168,2,13,1533.7302,8.8,"1oxM 1pST",591,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,8577,7449,28.3411,"28.34 VLpSEIFSPMoxLFR b3/y10 b9/y4 ,6.91 VLSEIFpSPMoxLFR b7/y6 b9/y4 ,","R","F","28.34 VLpSEIFSPMoxLFR b3/y10 b9/y4 ,",-777.777,"S265",1,"NaN",0,"NaN",0,"VLpSEIFSPMLFR","pept98221859",1]
["IPI00023048","Tax_Id=9606 Gene_Symbol=EEF1D Elongation factor     1-delta","KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR",3656.5068,4,19,3656.5163,19.3,"1pST",225,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",19,8720,15089,22.401,"10.06 KPApTPAEDDEDDDIDLFGSDNEEEDKEAAQLR b4/y29 ,22.40 KPATPAEDDEDDDIDLFGpSDNEEEDKEAAQLR b19/y14 ,","K","E","22.40 KPATPAEDDEDDDIDLFGpSDNEEEDKEAAQLR b19/y14 ,",-777.777,"S162",1,"NaN",0,"NaN",0,"KPATPAEDDEDDDIDLFGpSDNEEEDKEAAQLR","pept98221741",1]
["IPI00871523","Tax_Id=9606 Gene_Symbol=GTF3C5 General transcription factor       IIIC, polypeptide 5, 63kDa","MPLEAAAQTWR",1352.5985,3,14,1352.5948,10.8,"1pST",164,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",14,8706,3461,27.5535,"27.55 MPLEAAAQpTWR b9/y3 ,","-","R","27.55 MPLEAAAQpTWR b9/y3 ,",-777.777,"NaN",0,"T9",1,"NaN",0,"MPLEAAAQpTWR","pept14422652",1]
["IPI00185919","Tax_Id=9606 Gene_Symbol=LARP1 Isoform 1 of La-related       protein 1","GLSASLPDLDSENWIEVK",2051.9337,2,14,2051.9452,1.5,"1pST",509,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",14,13452,11101,28.1363,"28.14 GLpSASLPDLDSENWIEVK b3/y16 ,23.77 GLSApSLPDLDSENWIEVK b5/y14 ,7.32 GLSASLPDLDpSENWIEVK b11/y8 ,","K","K","28.14 GLpSASLPDLDSENWIEVK b3/y16 ,",-777.777,"S546;S548",2,"NaN",0,"NaN",0,"GL(p)SA(p)SLPDLDSENWIEVK","pept98221812",1]
["IPI00782992","Tax_Id=9606 Gene_Symbol=SRRM2 Isoform 1 of Serine/arginine       repetitive matrix protein 2","AGMSSNQSISSPVLDAVPR",1994.9045,2,20,1994.9132,0,"1pST",483,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",20,8676,10720,22.2513,"13.84 AGMpSSNQSISSPVLDAVPR b4/y16 ,14.01 AGMSpSNQSISSPVLDAVPR b5/y15 ,17.94 AGMSSNQpSISSPVLDAVPR b8/y12 ,22.25 AGMSSNQSIpSSPVLDAVPR b10/y10 ,22.25 AGMSSNQSISpSPVLDAVPR b11/y9 ,","K","T","22.25 AGMSSNQSIpSSPVLDAVPR b10/y10 ,22.25 AGMSSNQSISpSPVLDAVPR b11/y9 ,",-777.777,"S1403;S1404",2,"NaN",0,"NaN",0,"AGMSSNQSI(p)S(p)SPVLDAVPR","pept98221806",1]
["IPI00010951","Tax_Id=9606 Gene_Symbol=EPPK1 epiplakin 1","QVSASELHTSGILGPETLR",2074.0138,2,13,2074.0096,4.3,"1pST",163,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",13,8699,7796,29.256,"29.26 QVpSASELHTSGILGPETLR b3/y17 ,24.75 QVSApSELHTSGILGPETLR b5/y15 ,16.00 QVSASELHpTSGILGPETLR b9/y11 ,12.38 QVSASELHTpSGILGPETLR b10/y10 ,9.19 QVSASELHTSGILGPEpTLR b17/y3 ,","R","D","29.26 QVpSASELHTSGILGPETLR b3/y17 ,",-777.777,"S2716;S2718",2,"NaN",0,"NaN",0,"QV(p)SA(p)SELHTSGILGPETLR","pept14811329",1]
["IPI00008918","Tax_Id=9606 Gene_Symbol=LIMA1 Isoform Beta of LIM domain       and actin-binding protein 1","ETPHSPGVEDAPIAK",1626.7333,3,24,1626.729,2.1,"1pST",250,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",24,3477,6206,18.2654,"12.90 EpTPHSPGVEDAPIAK b2/y14 ,18.27 ETPHpSPGVEDAPIAK b5/y11 ,","R","V","18.27 ETPHpSPGVEDAPIAK b5/y11 ,",-777.777,"S490",1,"NaN",0,"NaN",0,"ETPHpSPGVEDAPIAK","pept13887502",1]
["IPI00030624","Tax_Id=9606 Gene_Symbol=SAPS3 Isoform 6 of       Serine/threonine-protein phosphatase 6 regulatory subunit   3","SVMKTTWGVLDPPVGNTR",2116.9493,2,12,2116.9418,10.6,"2pST",632,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,10527,11523,30.3185,"30.32 pSVMKpTTWGVLDPPVGNTR b1/y18 b5/y14 ,25.59 pSVMKTpTWGVLDPPVGNTR b1/y18 b6/y13 ,25.88 SVMKpTpTWGVLDPPVGNTR b5/y14 b6/y13 ,9.21 pSVMKTTWGVLDPPVGNpTR b1/y18 b17/y2 ,9.29 SVMKpTTWGVLDPPVGNpTR b5/y14 b17/y2 ,9.29 SVMKTpTWGVLDPPVGNpTR b6/y13 b17/y2 ,","K","L","30.32 pSVMKpTTWGVLDPPVGNTR b1/y18 b5/y14 ,",-777.777,"S327",1,"T331;T332",2,"NaN",0,"pSVMKpT(p)TWGVLDPPVGNTR","pept98221879",1]
["IPI00869011","Tax_Id=9606 Gene_Symbol=CARD11 Caspase recruitment       domain-containing protein 11","EACIVNLESKLR",1510.7143,2,11,1510.7214,1.2,"1pST",709,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,11836,7292,31.4188,"31.42 EACIVNLEpSKLR b9/y4 ,","R","R","31.42 EACIVNLEpSKLR b9/y4 ,",-777.777,"S433",1,"NaN",0,"NaN",0,"EACIVNLEpSKLR","pept98221930",1]
["IPI00411656","Tax_Id=9606 Gene_Symbol=PCLO Isoform 1 of Protein       piccolo","DASRPQTK",981.4308,2,11,981.4281,10.2,"1pST",366,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",11,7620,3164,31.6592,"25.71 DApSRPQTK b3/y6 ,31.66 DASRPQpTK b7/y2 ,","R","Q","31.66 DASRPQpTK b7/y2 ,",-777.777,"NaN",0,"T283",1,"NaN",0,"DASRPQpTK","pept14282640",1]
["IPI00030131","Tax_Id=9606 Gene_Symbol=TMPO Isoform Beta of       Lamina-associated polypeptide 2, isoforms beta/gamma","PEFLEDPSVLTKDK",1696.8032,2,12,1696.7961,3.1,"1pST",312,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,12797,8608,30.6957,"15.17 PEFLEDPpSVLTKDK b8/y7 ,30.70 PEFLEDPSVLpTKDK b11/y4 ,","M","L","30.70 PEFLEDPSVLpTKDK b11/y4 ,",-777.777,"NaN",0,"T12",1,"NaN",0,"PEFLEDPSVLpTKDK","pept98221766",1]
["IPI00012340","Tax_Id=9606 Gene_Symbol=SFRS9 Splicing factor,       arginine/serine-rich 9","GSPHYFSPFRPY",1533.6434,2,13,1533.6442,11.4,"1pST",35,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",13,8121,3832,29.7507,"29.75 GpSPHYFSPFRPY b2/y11 ,4.94 GSPHYFpSPFRPY b7/y6 ,","R","-","29.75 GpSPHYFSPFRPY b2/y11 ,",-777.777,"S211",1,"NaN",0,"NaN",0,"GpSPHYFSPFRPY","pept14422626",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7542,2,13,1733.7444,6.5,"1pST",416,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",13,8552,6835,29.7871,"23.43 NQEpSLGSPHICDLGK b4/y12 ,29.79 NQESLGpSPHICDLGK b7/y9 ,","R","V","29.79 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept13887532",1]
["IPI00023177","Tax_Id=9606 Gene_Symbol=CHAF1A chromatin assembly factor 1,       subunit A","SPSTTYLHTPTPSEDAAIPSK",2279.0321,3,15,2279.0359,1.1,"1pST",210,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",15,6907,9170,28.0405,"27.09 pSPSTTYLHTPTPSEDAAIPSK b1/y21 ,27.72 SPpSTTYLHTPTPSEDAAIPSK b3/y19 ,28.04 SPSpTTYLHTPTPSEDAAIPSK b4/y18 ,28.04 SPSTpTYLHTPTPSEDAAIPSK b5/y17 ,15.82 SPSTTYLHpTPTPSEDAAIPSK b9/y13 ,15.82 SPSTTYLHTPpTPSEDAAIPSK b11/y11 ,7.00 SPSTTYLHTPTPpSEDAAIPSK b13/y9 ,8.57 SPSTTYLHTPTPSEDAAIPpSK b20/y2 ,","R","S","28.04 SPSpTTYLHTPTPSEDAAIPSK b4/y18 ,28.04 SPSTpTYLHTPTPSEDAAIPSK b5/y17 ,",-777.777,"NaN",0,"T778;T779",2,"NaN",0,"SPS(p)T(p)TYLHTPTPSEDAAIPSK","pept13887497",1]
["IPI00911038","Tax_Id=9606 Gene_Symbol=- cDNA FLJ50838, highly similar to       Apoptotic chromatin condensation inducer in thenucleus   (Fragment)","ELLVPQHTVQLVGGLSPLSSPSDTK",2681.3714,3,22,2681.3677,9.1,"1pST",261,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",22,10963,9616,22.0351,"9.29 ELLVPQHpTVQLVGGLSPLSSPSDTK b8/y18 ,22.04 ELLVPQHTVQLVGGLpSPLSSPSDTK b16/y10 ,17.64 ELLVPQHTVQLVGGLSPLpSSPSDTK b19/y7 ,17.25 ELLVPQHTVQLVGGLSPLSpSPSDTK b20/y6 ,13.94 ELLVPQHTVQLVGGLSPLSSPpSDTK b22/y4 ,13.65 ELLVPQHTVQLVGGLSPLSSPSDpTK b24/y2 ,","R","A","22.04 ELLVPQHTVQLVGGLpSPLSSPSDTK b16/y10 ,",-777.777,"S380",1,"NaN",0,"NaN",0,"ELLVPQHTVQLVGGL(p)SPLSSPSDTK","pept14811342",1]
["IPI00003419","Tax_Id=9606 Gene_Symbol=C11orf58 Small acidic     protein","SASPDDDLGSSNWEAADLGNEER",2513.9774,3,14,2513.982,0,"1pST",66,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",14,8241,13038,30.0971,"30.10 pSASPDDDLGSSNWEAADLGNEER b1/y23 ,30.10 SApSPDDDLGSSNWEAADLGNEER b3/y21 ,10.95 SASPDDDLGpSSNWEAADLGNEER b10/y14 ,7.11 SASPDDDLGSpSNWEAADLGNEER b11/y13 ,","R","K","30.10 pSASPDDDLGSSNWEAADLGNEER b1/y23 ,30.10 SApSPDDDLGSSNWEAADLGNEER b3/y21 ,",-777.777,"S15;S17",2,"NaN",0,"NaN",0,"(p)SA(p)SPDDDLGSSNWEAADLGNEER","pept98221714",1]
["IPI00023048","Tax_Id=9606 Gene_Symbol=EEF1D Elongation factor     1-delta","KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR",3656.4975,4,13,3656.5163,11.7,"1pST",225,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,8709,15088,31.3366,"9.14 KPApTPAEDDEDDDIDLFGSDNEEEDKEAAQLR b4/y29 ,31.34 KPATPAEDDEDDDIDLFGpSDNEEEDKEAAQLR b19/y14 ,","K","E","31.34 KPATPAEDDEDDDIDLFGpSDNEEEDKEAAQLR b19/y14 ,",-777.777,"S162",1,"NaN",0,"NaN",0,"KPATPAEDDEDDDIDLFGpSDNEEEDKEAAQLR","pept98221740",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7445,2,15,1733.7444,9.1,"1pST",559,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",15,8218,8901,29.3479,"23.43 NQEpSLGSPHICDLGK b4/y12 ,29.35 NQESLGpSPHICDLGK b7/y9 ,","R","V","29.35 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept98221835",1]
["IPI00010951","Tax_Id=9606 Gene_Symbol=EPPK1 epiplakin 1","QVSASELHTSGILGPETLR",2074.0075,2,21,2074.0096,9.5,"1pST",163,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",21,8707,7795,23.6471,"23.65 QVpSASELHTSGILGPETLR b3/y17 ,19.87 QVSApSELHTSGILGPETLR b5/y15 ,12.72 QVSASELHpTSGILGPETLR b9/y11 ,12.72 QVSASELHTpSGILGPETLR b10/y10 ,11.53 QVSASELHTSGILGPEpTLR b17/y3 ,","R","D","23.65 QVpSASELHTSGILGPETLR b3/y17 ,",-777.777,"S2716;S2718",2,"NaN",0,"NaN",0,"QV(p)SA(p)SELHTSGILGPETLR","pept14811330",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","YSPSQNSPIHHIPSR",1878.7866,3,21,1878.7815,0,"2pST",215,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",21,4260,6126,23.766,"22.84 YpSPpSQNSPIHHIPSR b2/y14 b4/y12 ,23.45 YpSPSQNpSPIHHIPSR b2/y14 b7/y9 ,23.77 YSPpSQNpSPIHHIPSR b4/y12 b7/y9 ,8.84 YpSPSQNSPIHHIPpSR b2/y14 b14/y2 ,8.92 YSPpSQNSPIHHIPpSR b4/y12 b14/y2 ,7.32 YSPSQNpSPIHHIPpSR b7/y9 b14/y2 ,","R","R","23.77 YSPpSQNpSPIHHIPSR b4/y12 b7/y9 ,",-777.777,"S285;S287;S290",3,"NaN",0,"NaN",0,"Y(p)SP(p)SQN(p)SPIHHIPSR","pept14282580",1]
["IPI00442096","Tax_Id=9606 Gene_Symbol=ETV3L ETS translocation variant       3-like protein","TGEESLTSPNLENLK",1710.7595,2,26,1710.7713,10.7,"1pST",423,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",26,15013,8720,18.8051,"8.00 pTGEESLTSPNLENLK b1/y15 ,6.46 TGEEpSLTSPNLENLK b5/y11 ,10.89 TGEESLpTSPNLENLK b7/y9 ,18.81 TGEESLTpSPNLENLK b8/y8 ,","K","A","18.81 TGEESLTpSPNLENLK b8/y8 ,",-777.777,"S346",1,"NaN",0,"NaN",0,"TGEESLTpSPNLENLK","pept98221791",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7409,2,14,1733.7444,3.6,"1pST",559,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",14,8688,8860,31.1657,"19.40 NQEpSLGSPHICDLGK b4/y12 ,31.17 NQESLGpSPHICDLGK b7/y9 ,","R","V","31.17 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept98221837",1]
["IPI00383128","Tax_Id=9606 Gene_Symbol=LOC645225 similar to ATP synthase,       H+ transporting, mitochondrial F0 complex, subunit F2","GSISGLTMVLAGYMLFR",1974.8736,4,14,1974.8749,0.5,"1pST 1pY",393,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",14,16368,7393,31.1657,"31.17 GpSISGLTMVLAGpYMLFR b2/y16 b13/y5 ,20.35 GSIpSGLTMVLAGpYMLFR b4/y14 b13/y5 ,20.69 GSISGLpTMVLAGpYMLFR b7/y11 b13/y5 ,","K","Y","31.17 GpSISGLTMVLAGpYMLFR b2/y16 b13/y5 ,",-777.777,"S53",1,"NaN",0,"Y64",1,"GpSISGLTMVLAGpYMLFR","pept14811385",1]
["IPI00783950","Tax_Id=9606 Gene_Symbol=TTN Isoform 6 of   Titin","VDLRFTGSPFNKK",1587.7665,4,14,1587.781,6.1,"1pST",116,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1000.raw",14,5126,3577,31.1869,"31.19 VDLRFpTGSPFNKK b6/y8 ,23.41 VDLRFTGpSPFNKK b8/y6 ,","K","Q","31.19 VDLRFpTGSPFNKK b6/y8 ,",-777.777,"NaN",0,"T3638",1,"NaN",0,"VDLRFpTGSPFNKK","pept14555358",1]
["IPI00033419","Tax_Id=9606 Gene_Symbol=FEM1B Protein fem-1 homolog     B","YLLGYVSQQGGQR",1547.722,2,16,1547.7133,0,"1pST",582,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",16,3280,7528,29.3128,"29.31 YLLGYVpSQQGGQR b7/y7 ,","R","S","29.31 YLLGYVpSQQGGQR b7/y7 ,",-777.777,"S40",1,"NaN",0,"NaN",0,"YLLGYVpSQQGGQR","pept98221849",1]
["IPI00009326","Tax_Id=9606 Gene_Symbol=YAP1 65 kDa Yes-associated       protein","AHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR",3613.8156,4,19,3613.8254,4.8,"1pST",126,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",19,8569,7531,26.4026,"25.75 AHpSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR b3/y35 ,25.75 AHSpSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR b4/y34 ,26.40 AHSSPApSLQLGAVSPGTLTPTGVVSGPAATPTAQHLR b7/y31 ,14.01 AHSSPASLQLGAVpSPGTLTPTGVVSGPAATPTAQHLR b14/y24 ,10.83 AHSSPASLQLGAVSPGpTLTPTGVVSGPAATPTAQHLR b17/y21 ,8.54 AHSSPASLQLGAVSPGTLpTPTGVVSGPAATPTAQHLR b19/y19 ,8.54 AHSSPASLQLGAVSPGTLTPpTGVVSGPAATPTAQHLR b21/y17 ,14.01 AHSSPASLQLGAVSPGTLTPTGVVpSGPAATPTAQHLR b25/y13 ,21.41 AHSSPASLQLGAVSPGTLTPTGVVSGPAApTPTAQHLR b30/y8 ,21.14 AHSSPASLQLGAVSPGTLTPTGVVSGPAATPpTAQHLR b32/y6 ,","R","Q","26.40 AHSSPApSLQLGAVSPGTLTPTGVVSGPAATPTAQHLR b7/y31 ,",-777.777,"S127;S128;S131",3,"NaN",0,"NaN",0,"AH(p)S(p)SPA(p)SLQLGAVSPGTLTPTGVVSGPAATPTAQHLR","pept14422641",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7419,2,10,1733.7444,8.6,"1pST",559,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",10,8430,8875,35.4415,"23.43 NQEpSLGSPHICDLGK b4/y12 ,35.44 NQESLGpSPHICDLGK b7/y9 ,","R","V","35.44 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept98221836",1]
["IPI00328293","Tax_Id=9606 Gene_Symbol=SRRM1 cDNA FLJ61739, highly similar       to Serine/arginine repetitive matrix protein 1","KPPAPPSPVQSQSPSTNWSPAVPVK",2742.2691,3,11,2742.2819,2,"2pST",697,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,7347,13826,34.5093,"29.74 KPPAPPpSPVQpSQSPSTNWSPAVPVK b7/y19 b11/y15 ,34.51 KPPAPPpSPVQSQpSPSTNWSPAVPVK b7/y19 b13/y13 ,25.59 KPPAPPSPVQpSQpSPSTNWSPAVPVK b11/y15 b13/y13 ,25.33 KPPAPPpSPVQSQSPpSTNWSPAVPVK b7/y19 b15/y11 ,17.88 KPPAPPSPVQpSQSPpSTNWSPAVPVK b11/y15 b15/y11 ,17.88 KPPAPPSPVQSQpSPpSTNWSPAVPVK b13/y13 b15/y11 ,25.33 KPPAPPpSPVQSQSPSpTNWSPAVPVK b7/y19 b16/y10 ,17.88 KPPAPPSPVQpSQSPSpTNWSPAVPVK b11/y15 b16/y10 ,17.88 KPPAPPSPVQSQpSPSpTNWSPAVPVK b13/y13 b16/y10 ,11.98 KPPAPPSPVQSQSPpSpTNWSPAVPVK b15/y11 b16/y10 ,20.87 KPPAPPpSPVQSQSPSTNWpSPAVPVK b7/y19 b19/y7 ,14.39 KPPAPPSPVQpSQSPSTNWpSPAVPVK b11/y15 b19/y7 ,14.39 KPPAPPSPVQSQpSPSTNWpSPAVPVK b13/y13 b19/y7 ,9.69 KPPAPPSPVQSQSPpSTNWpSPAVPVK b15/y11 b19/y7 ,9.69 KPPAPPSPVQSQSPSpTNWpSPAVPVK b16/y10 b19/y7 ,","K","K","34.51 KPPAPPpSPVQSQpSPSTNWSPAVPVK b7/y19 b13/y13 ,",-777.777,"S781;S785;S787",3,"NaN",0,"NaN",0,"KPPAPPpSPVQ(p)SQ(p)SPSTNWSPAVPVK","pept98221921",1]
["IPI00871803","Tax_Id=9606 Gene_Symbol=- 30 kDa protein","KEAISDLEQQWK",1553.7188,2,15,1553.7126,10.4,"1pST",564,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",15,3911,7548,30.8706,"30.87 KEAIpSDLEQQWK b5/y8 ,","K","Q","30.87 KEAIpSDLEQQWK b5/y8 ,",-777.777,"S61",1,"NaN",0,"NaN",0,"KEAIpSDLEQQWK","pept98221842",1]
["IPI00220113","Tax_Id=9606 Gene_Symbol=MAP4 Isoform 2 of       Microtubule-associated protein 4","DMSPLSETEMALGK",1587.6505,2,15,1587.6561,10.4,"1pST",241,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",15,10553,7742,31.1657,"31.17 DMpSPLSETEMALGK b3/y12 ,11.71 DMSPLpSETEMALGK b6/y9 ,8.74 DMSPLSEpTEMALGK b8/y7 ,","K","D","31.17 DMpSPLSETEMALGK b3/y12 ,",-777.777,"S507",1,"NaN",0,"NaN",0,"DMpSPLSETEMALGK","pept98221747",1]
["IPI00220740","Tax_Id=9606 Gene_Symbol=NPM1 Isoform 2 of     Nucleophosmin","DELHIVEAEAMNYEGSPIK",2223.9697,3,12,2223.9759,10.3,"1pST",319,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",12,11119,8940,34.2287,"34.23 DELHIVEAEAMNYEGpSPIK b16/y4 ,","K","V","34.23 DELHIVEAEAMNYEGpSPIK b16/y4 ,",-777.777,"S70",1,"NaN",0,"NaN",0,"DELHIVEAEAMNYEGpSPIK","pept13887507",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7417,2,11,1733.7444,5.8,"1pST",219,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",11,6090,4358,35.955,"29.35 NQEpSLGSPHICDLGK b4/y12 ,35.95 NQESLGpSPHICDLGK b7/y9 ,","R","V","35.95 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept14422675",1]
["IPI00655676","Tax_Id=9606 Gene_Symbol=PRG4 Isoform D of Proteoglycan       4","TLPIYLLLLLSVFVIQQVSSQELSCK",3310.5387,3,13,3310.5419,0,"3pST 1pY",670,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,15657,14831,33.9719,"9.83 pTLPIpYLLLLLpSVFVIQQVpSSQELSCK b1/y26 b5/y22 b11/y16 b19/y8 ,9.83 pTLPIpYLLLLLpSVFVIQQVSpSQELSCK b1/y26 b5/y22 b11/y16 b20/y7 ,10.59 pTLPIpYLLLLLSVFVIQQVpSpSQELSCK b1/y26 b5/y22 b19/y8 b20/y7 ,20.35 TLPIpYLLLLLpSVFVIQQVpSpSQELSCK b5/y22 b11/y16 b19/y8 b20/y7 ,7.54 pTLPIpYLLLLLpSVFVIQQVSSQELpSCK b1/y26 b5/y22 b11/y16 b24/y3 ,19.69 pTLPIpYLLLLLSVFVIQQVpSSQELpSCK b1/y26 b5/y22 b19/y8 b24/y3 ,33.97 TLPIpYLLLLLpSVFVIQQVpSSQELpSCK b5/y22 b11/y16 b19/y8 b24/y3 ,19.69 pTLPIpYLLLLLSVFVIQQVSpSQELpSCK b1/y26 b5/y22 b20/y7 b24/y3 ,33.97 TLPIpYLLLLLpSVFVIQQVSpSQELpSCK b5/y22 b11/y16 b20/y7 b24/y3 ,10.88 TLPIpYLLLLLSVFVIQQVpSpSQELpSCK b5/y22 b19/y8 b20/y7 b24/y3 ,","K","G","33.97 TLPIpYLLLLLpSVFVIQQVpSSQELpSCK b5/y22 b11/y16 b19/y8 b24/y3 ,33.97 TLPIpYLLLLLpSVFVIQQVSpSQELpSCK b5/y22 b11/y16 b20/y7 b24/y3 ,",-777.777,"S15;S28;S23;S24",4,"NaN",0,"Y9",1,"TLPIpYLLLLLpSVFVIQQV(p)S(p)SQELpSCK","pept98221904",1]
["IPI00011069","Tax_Id=9606 Gene_Symbol=UNG Isoform 2 of Uracil-DNA       glycosylase","HAPSPEPAVQGTGVAGVPEESGDAAAIPAK",2889.342,3,11,2889.3546,3.3,"1pST",453,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,6570,14268,36.4204,"36.42 HAPpSPEPAVQGTGVAGVPEESGDAAAIPAK b4/y27 ,28.02 HAPSPEPAVQGpTGVAGVPEESGDAAAIPAK b12/y19 ,11.64 HAPSPEPAVQGTGVAGVPEEpSGDAAAIPAK b21/y10 ,","R","K","36.42 HAPpSPEPAVQGTGVAGVPEESGDAAAIPAK b4/y27 ,",-777.777,"S23",1,"NaN",0,"NaN",0,"HAPpSPEPAVQGTGVAGVPEESGDAAAIPAK","pept98221801",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7426,2,12,1733.7444,3,"1pST",559,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,10595,8893,35.4415,"23.43 NQEpSLGSPHICDLGK b4/y12 ,35.44 NQESLGpSPHICDLGK b7/y9 ,","R","V","35.44 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept98221841",1]
["IPI00177498","Tax_Id=9606 Gene_Symbol=LIMCH1 Isoform 3 of LIM and       calponin homology domains-containing protein 1","SPEPEATLTFPFLDK",1770.8017,2,16,1770.8117,14.5,"1pST",438,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",16,13786,9166,31.6971,"31.70 pSPEPEATLTFPFLDK b1/y15 ,22.07 SPEPEApTLTFPFLDK b7/y9 ,22.07 SPEPEATLpTFPFLDK b9/y7 ,","K","M","31.70 pSPEPEATLTFPFLDK b1/y15 ,",-777.777,"S1262",1,"NaN",0,"NaN",0,"pSPEPEATLTFPFLDK","pept98221795",1]
["IPI00013830","Tax_Id=9606 Gene_Symbol=SNW1 SNW domain-containing protein       1","GPPSPPAPVMHSPSR",1592.7121,3,12,1592.7171,9,"1pST",323,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",12,4278,5031,35.955,"35.95 GPPpSPPAPVMHSPSR b4/y12 ,6.50 GPPSPPAPVMHpSPSR b12/y4 ,8.07 GPPSPPAPVMHSPpSR b14/y2 ,","R","K","35.95 GPPpSPPAPVMHSPSR b4/y12 ,",-777.777,"S224",1,"NaN",0,"NaN",0,"GPPpSPPAPVMHSPSR","pept14282613",1]
["IPI00215701","Tax_Id=9606 Gene_Symbol=BNIP1 Isoform 2 of Vesicle       transport protein SEC20","QMLRKTTK",1100.5327,2,11,1100.5413,4.2,"1oxM 1pST",540,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",11,6141,3901,37.017,"37.02 QMoxLRKpTTK b2/y7 b6/y3 ,28.22 QMoxLRKTpTK b2/y7 b7/y2 ,","K","E","37.02 QMoxLRKpTTK b2/y7 b6/y3 ,",-777.777,"NaN",0,"T92",1,"NaN",0,"QMLRKpTTK","pept13887615",1]
["IPI00451401","Tax_Id=9606 Gene_Symbol=TPI1 Isoform 2 of Triosephosphate       isomerase","KQSLGELIGTLNAAK",1621.8385,2,16,1621.844,14.7,"1pST",65,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",16,10291,7926,32.1388,"32.14 KQpSLGELIGTLNAAK b3/y13 ,16.45 KQSLGELIGpTLNAAK b10/y6 ,","R","V","32.14 KQpSLGELIGTLNAAK b3/y13 ,",-777.777,"S21",1,"NaN",0,"NaN",0,"KQpSLGELIGTLNAAK","pept98221712",1]
["IPI00022608","Tax_Id=9606 Gene_Symbol=SORL1 Sortilin-related     receptor","STVFTIFGSNK",1279.581,2,17,1279.585,0,"1pST",411,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",17,5865,4735,31.4188,"23.29 pSTVFTIFGSNK b1/y11 ,29.31 SpTVFTIFGSNK b2/y10 ,31.42 STVFpTIFGSNK b5/y7 ,24.57 STVFTIFGpSNK b9/y3 ,","K","E","31.42 STVFpTIFGSNK b5/y7 ,",-777.777,"NaN",0,"T595;T598",2,"NaN",0,"S(p)TVF(p)TIFGSNK","pept13887525",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","IDISPSTLR",1080.5161,2,12,1080.5216,1.3,"1pST",49,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,6652,4710,36.4263,"36.43 IDIpSPSTLR b4/y6 ,29.75 IDISPpSTLR b6/y4 ,29.16 IDISPSpTLR b7/y3 ,","R","K","36.43 IDIpSPSTLR b4/y6 ,",-777.777,"S658",1,"NaN",0,"NaN",0,"IDIpSPSTLR","pept98221705",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7458,2,12,1733.7444,5.6,"1pST",416,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",12,398,6822,36.4797,"19.40 NQEpSLGSPHICDLGK b4/y12 ,36.48 NQESLGpSPHICDLGK b7/y9 ,","R","V","36.48 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept13887527",1]
["IPI00220219","Tax_Id=9606 Gene_Symbol=COPB2 Coatomer subunit   beta'","STAQQELDGKPASPTPVIVASHTANK",2726.3194,3,14,2726.3276,1.9,"1pST",134,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",14,5714,13747,34.6885,"8.02 pSTAQQELDGKPASPTPVIVASHTANK b1/y26 ,8.02 SpTAQQELDGKPASPTPVIVASHTANK b2/y25 ,34.69 STAQQELDGKPApSPTPVIVASHTANK b13/y14 ,34.29 STAQQELDGKPASPpTPVIVASHTANK b15/y12 ,23.65 STAQQELDGKPASPTPVIVApSHTANK b21/y6 ,23.65 STAQQELDGKPASPTPVIVASHpTANK b23/y4 ,","R","E","34.69 STAQQELDGKPApSPTPVIVASHTANK b13/y14 ,",-777.777,"S859",1,"T861",1,"NaN",0,"STAQQELDGKPA(p)SP(p)TPVIVASHTANK","pept98221724",1]
["IPI00902468","Tax_Id=9606 Gene_Symbol=- cDNA FLJ90843 fis, clone       Y79AA1002378, highly similar to Zinc finger protein 38","GTKPPLQEAGSKKGEHTLGR",2170.1081,3,17,2170.0896,11.2,"1pST",522,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,11801,11824,31.6971,"9.28 GpTKPPLQEAGSKKGEHTLGR b2/y19 ,31.70 GTKPPLQEAGpSKKGEHTLGR b11/y10 ,12.38 GTKPPLQEAGSKKGEHpTLGR b17/y4 ,","K","N","31.70 GTKPPLQEAGpSKKGEHTLGR b11/y10 ,",-777.777,"S259",1,"NaN",0,"NaN",0,"GTKPPLQEAGpSKKGEHTLGR","pept98221816",1]
["IPI00012199","Tax_Id=9606 Gene_Symbol=CCDC86 Coiled-coil       domain-containing protein 86","LGGLRPESPESLTSVSR",1863.9161,2,23,1863.9091,5,"1pST",214,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",23,6603,6860,26.1557,"26.16 LGGLRPEpSPESLTSVSR b8/y10 ,26.16 LGGLRPESPEpSLTSVSR b11/y7 ,25.79 LGGLRPESPESLpTSVSR b13/y5 ,25.79 LGGLRPESPESLTpSVSR b14/y4 ,25.09 LGGLRPESPESLTSVpSR b16/y2 ,","R","T","26.16 LGGLRPEpSPESLTSVSR b8/y10 ,26.16 LGGLRPESPEpSLTSVSR b11/y7 ,",-777.777,"NaN",0,"NaN",0,"NaN",0,"NaN","pept14811336",1]
["IPI00008998","Tax_Id=9606 Gene_Symbol=PTPLAD1 Protein tyrosine       phosphatase-like protein PTPLAD1","WLDESDAEMELR",1572.6107,2,16,1572.6167,14.7,"1pST",536,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",16,9538,7669,33.1593,"33.16 WLDEpSDAEMELR b5/y8 ,","R","A","33.16 WLDEpSDAEMELR b5/y8 ,",-777.777,"S114",1,"NaN",0,"NaN",0,"WLDEpSDAEMELR","pept98221823",1]
["IPI00513891","Tax_Id=9606 Gene_Symbol=PPIL4 Peptidylprolyl isomerase       (Cyclophilin)-like 4","WGLVTMKK",1057.508,2,14,1057.5031,0.2,"1oxM 1pST",361,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",14,10606,3434,35.3351,"35.34 WGLVpTMoxKK b5/y4 b6/y3 ,","K","K","35.34 WGLVpTMoxKK b5/y4 b6/y3 ,",-777.777,"NaN",0,"T52",1,"NaN",0,"WGLVpTMKK","pept14811366",1]
["IPI00018274","Tax_Id=9606 Gene_Symbol=EGFR Isoform 1 of Epidermal growth       factor receptor","ELVEPLTPSGEAPNQALLR",2113.0362,2,25,2113.0456,8.8,"1pST",334,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",25,9476,11481,24.749,"15.56 ELVEPLpTPSGEAPNQALLR b7/y13 ,24.75 ELVEPLTPpSGEAPNQALLR b9/y11 ,","R","I","24.75 ELVEPLTPpSGEAPNQALLR b9/y11 ,",-777.777,"S695",1,"NaN",0,"NaN",0,"ELVEPLTPpSGEAPNQALLR","pept98221774",1]
["IPI00221325","Tax_Id=9606 Gene_Symbol=RANBP2 E3 SUMO-protein ligase       RanBP2","EDALDDSVSSSSVHASPLASSPVR",2492.0954,3,14,2492.1068,0,"1pST",408,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",14,7095,9739,36.3388,"21.14 EDALDDpSVSSSSVHASPLASSPVR b7/y18 ,17.04 EDALDDSVpSSSSVHASPLASSPVR b9/y16 ,21.14 EDALDDSVSpSSSVHASPLASSPVR b10/y15 ,30.83 EDALDDSVSSpSSVHASPLASSPVR b11/y14 ,36.34 EDALDDSVSSSpSVHASPLASSPVR b12/y13 ,30.83 EDALDDSVSSSSVHApSPLASSPVR b16/y9 ,30.46 EDALDDSVSSSSVHASPLApSSPVR b20/y5 ,30.10 EDALDDSVSSSSVHASPLASpSPVR b21/y4 ,","R","K","36.34 EDALDDSVSSSpSVHASPLASSPVR b12/y13 ,",-777.777,"S2242",1,"NaN",0,"NaN",0,"EDALDDSVSSSpSVHASPLASSPVR","pept13887521",1]
["IPI00021812","Tax_Id=9606 Gene_Symbol=AHNAK Neuroblast       differentiation-associated protein AHNAK","LPSGSGAASPTGSAVDIR",1721.7918,2,13,1721.7985,6.6,"1pST",1,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,5383,8780,37.6495,"37.65 LPpSGSGAASPTGSAVDIR b3/y16 ,32.37 LPSGpSGAASPTGSAVDIR b5/y14 ,27.42 LPSGSGAApSPTGSAVDIR b9/y10 ,22.54 LPSGSGAASPpTGSAVDIR b11/y8 ,22.25 LPSGSGAASPTGpSAVDIR b13/y6 ,","R","A","37.65 LPpSGSGAASPTGSAVDIR b3/y16 ,",-777.777,"S210",1,"NaN",0,"NaN",0,"LPpSGSGAASPTGSAVDIR","pept98221687",1]
["IPI00297593","Tax_Id=9606 Gene_Symbol=USP34 Isoform 1 of Ubiquitin       carboxyl-terminal hydrolase 34","SVVISLR",852.4387,1,14,852.447,0,"1pST",574,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",14,12480,3114,36.8494,"19.81 pSVVISLR b1/y7 ,36.85 SVVIpSLR b5/y3 ,","R","L","36.85 SVVIpSLR b5/y3 ,",-777.777,"S920",1,"NaN",0,"NaN",0,"SVVIpSLR","pept98221847",1]
["IPI00220113","Tax_Id=9606 Gene_Symbol=MAP4 Isoform 2 of       Microtubule-associated protein 4","DVTPPPETEVVLIK",1615.8044,2,23,1615.811,22,"1pST",241,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",23,8956,7888,27.8738,"27.87 DVpTPPPETEVVLIK b3/y12 ,9.49 DVTPPPEpTEVVLIK b8/y7 ,","K","N","27.87 DVpTPPPETEVVLIK b3/y12 ,",-777.777,"NaN",0,"T521",1,"NaN",0,"DVpTPPPETEVVLIK","pept98221744",1]
["IPI00910197","Tax_Id=9606 Gene_Symbol=- cDNA FLJ59577, highly similar to       Bromodomain-containing protein 8","MQELLSSFETIR",1532.68,2,15,1532.6946,4.7,"1pST",430,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",15,4852,5784,35.9364,"35.94 MQELLpSSFETIR b6/y7 ,29.31 MQELLSpSFETIR b7/y6 ,17.32 MQELLSSFEpTIR b10/y3 ,","-","I","35.94 MQELLpSSFETIR b6/y7 ,",-777.777,"S6",1,"NaN",0,"NaN",0,"MQELLpSSFETIR","pept13887539",1]
["IPI00008918","Tax_Id=9606 Gene_Symbol=LIMA1 Isoform Beta of LIM domain       and actin-binding protein 1","ETPHSPGVEDAPIAK",1626.7436,2,12,1626.729,0,"1pST",585,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,3687,8069,39.2847,"25.30 EpTPHSPGVEDAPIAK b2/y14 ,39.28 ETPHpSPGVEDAPIAK b5/y11 ,","R","V","39.28 ETPHpSPGVEDAPIAK b5/y11 ,",-777.777,"S490",1,"NaN",0,"NaN",0,"ETPHpSPGVEDAPIAK","pept98221853",1]
["IPI00103597","Tax_Id=9606 Gene_Symbol=SORCS1 Isoform 1 of VPS10       domain-containing receptor SorCS1","LYSSAEFGR",1108.4688,2,12,1108.459,0,"1pST",747,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,9481,4892,39.4407,"39.44 LYpSSAEFGR b3/y7 ,39.44 LYSpSAEFGR b4/y6 ,","K","R","39.44 LYpSSAEFGR b3/y7 ,39.44 LYSpSAEFGR b4/y6 ,",-777.777,"S298;S299",2,"NaN",0,"NaN",0,"LY(p)S(p)SAEFGR","pept98221958",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7417,2,15,1733.7444,7.7,"1pST",559,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",15,7508,8872,36.4797,"24.53 NQEpSLGSPHICDLGK b4/y12 ,36.48 NQESLGpSPHICDLGK b7/y9 ,","R","V","36.48 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept98221832",1]
["IPI00219301","Tax_Id=9606 Gene_Symbol=MARCKS Myristoylated alanine-rich       C-kinase substrate","EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK",2994.244,3,12,2994.2615,1,"1pST",302,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,5609,14469,39.9969,"40.00 EAPAEGEAAEPGpSPTAAEGEAASAASSTSSPK b13/y20 ,40.00 EAPAEGEAAEPGSPpTAAEGEAASAASSTSSPK b15/y18 ,29.74 EAPAEGEAAEPGSPTAAEGEAApSAASSTSSPK b23/y10 ,17.51 EAPAEGEAAEPGSPTAAEGEAASAApSSTSSPK b26/y7 ,14.25 EAPAEGEAAEPGSPTAAEGEAASAASpSTSSPK b27/y6 ,14.25 EAPAEGEAAEPGSPTAAEGEAASAASSpTSSPK b28/y5 ,11.66 EAPAEGEAAEPGSPTAAEGEAASAASSTpSSPK b29/y4 ,9.55 EAPAEGEAAEPGSPTAAEGEAASAASSTSpSPK b30/y3 ,","K","A","40.00 EAPAEGEAAEPGpSPTAAEGEAASAASSTSSPK b13/y20 ,40.00 EAPAEGEAAEPGSPpTAAEGEAASAASSTSSPK b15/y18 ,",-777.777,"S118",1,"T120",1,"NaN",0,"EAPAEGEAAEPG(p)SP(p)TAAEGEAASAASSTSSPK","pept98221763",1]
["IPI00172636","Tax_Id=9606 Gene_Symbol=CAMK2D Isoform Delta 6 of       Calcium/calmodulin-dependent protein kinase type II delta   chain","KLKGAILTTMLATR",1755.8018,3,11,1755.816,11.4,"3pST",214,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",11,6136,4438,41.1288,"41.13 KLKGAILpTpTMLApTR b8/y7 b9/y6 b13/y2 ,","R","N","41.13 KLKGAILpTpTMLApTR b8/y7 b9/y6 b13/y2 ,",-777.777,"NaN",0,"T306;T307;T311",3,"NaN",0,"KLKGAILpTpTMLApTR","pept14422674",1]
["IPI00163505","Tax_Id=9606 Gene_Symbol=RBM39 Isoform 1 of RNA-binding       protein 39","DKSPVREPIDNLTPEER",2073.9771,3,12,2073.9732,5,"1pST",410,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",12,4924,7789,40.4995,"40.50 DKpSPVREPIDNLTPEER b3/y15 ,12.27 DKSPVREPIDNLpTPEER b13/y5 ,","K","D","40.50 DKpSPVREPIDNLTPEER b3/y15 ,",-777.777,"S136",1,"NaN",0,"NaN",0,"DKpSPVREPIDNLTPEER","pept14811395",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7433,2,10,1733.7444,4,"1pST",559,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",10,8213,8897,42.6123,"23.78 NQEpSLGSPHICDLGK b4/y12 ,42.61 NQESLGpSPHICDLGK b7/y9 ,","R","V","42.61 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept98221834",1]
["IPI00179890","Tax_Id=9606 Gene_Symbol=G3BP2 Isoform B of Ras       GTPase-activating protein-binding protein 2","STTPPPAEPVSLPQEPPKPR",2204.0857,3,13,2204.0878,1,"1pST",388,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",13,5420,8246,40.3273,"40.33 pSTTPPPAEPVSLPQEPPKPR b1/y20 ,40.33 SpTTPPPAEPVSLPQEPPKPR b2/y19 ,34.45 STpTPPPAEPVSLPQEPPKPR b3/y18 ,14.48 STTPPPAEPVpSLPQEPPKPR b11/y10 ,","K","V","40.33 pSTTPPPAEPVSLPQEPPKPR b1/y20 ,40.33 SpTTPPPAEPVSLPQEPPKPR b2/y19 ,",-777.777,"S225",1,"T226",1,"NaN",0,"(p)S(p)TTPPPAEPVSLPQEPPKPR","pept14811381",1]
["IPI00376317","Tax_Id=9606 Gene_Symbol=EDC4 Isoform 1 of Enhancer of       mRNA-decapping protein 4","SPDVISSASTALSQDIPEIASEALSR",2723.2796,3,24,2723.2902,3.5,"1pST",439,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",24,16502,13735,30.0377,"30.04 pSPDVISSASTALSQDIPEIASEALSR b1/y26 ,26.12 SPDVIpSSASTALSQDIPEIASEALSR b6/y21 ,26.39 SPDVISpSASTALSQDIPEIASEALSR b7/y20 ,26.95 SPDVISSApSTALSQDIPEIASEALSR b9/y18 ,22.69 SPDVISSASpTALSQDIPEIASEALSR b10/y17 ,15.46 SPDVISSASTALpSQDIPEIASEALSR b13/y14 ,7.48 SPDVISSASTALSQDIPEIApSEALSR b21/y6 ,10.66 SPDVISSASTALSQDIPEIASEALpSR b25/y2 ,","R","G","30.04 pSPDVISSASTALSQDIPEIASEALSR b1/y26 ,",-777.777,"S729",1,"NaN",0,"NaN",0,"(p)SPDVISSASTALSQDIPEIASEALSR","pept98221796",1]
["IPI00220219","Tax_Id=9606 Gene_Symbol=COPB2 Coatomer subunit   beta'","STAQQELDGKPASPTPVIVASHTANK",2726.325,3,17,2726.3276,0.8,"1pST",134,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,5755,13750,37.3461,"18.26 pSTAQQELDGKPASPTPVIVASHTANK b1/y26 ,18.26 SpTAQQELDGKPASPTPVIVASHTANK b2/y25 ,37.35 STAQQELDGKPApSPTPVIVASHTANK b13/y14 ,32.25 STAQQELDGKPASPpTPVIVASHTANK b15/y12 ,15.14 STAQQELDGKPASPTPVIVApSHTANK b21/y6 ,10.06 STAQQELDGKPASPTPVIVASHpTANK b23/y4 ,","R","E","37.35 STAQQELDGKPApSPTPVIVASHTANK b13/y14 ,",-777.777,"S859",1,"NaN",0,"NaN",0,"STAQQELDGKPApSPTPVIVASHTANK","pept98221726",1]
["IPI00010951","Tax_Id=9606 Gene_Symbol=EPPK1 epiplakin 1","QVSASELHTSGILGPETLR",2074.0042,2,31,2074.0096,7.6,"1pST",57,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",31,8555,11261,23.6471,"23.65 QVpSASELHTSGILGPETLR b3/y17 ,19.62 QVSApSELHTSGILGPETLR b5/y15 ,8.12 QVSASELHpTSGILGPETLR b9/y11 ,8.12 QVSASELHTpSGILGPETLR b10/y10 ,7.05 QVSASELHTSGILGPEpTLR b17/y3 ,","R","D","23.65 QVpSASELHTSGILGPETLR b3/y17 ,",-777.777,"S2716;S2718",2,"NaN",0,"NaN",0,"QV(p)SA(p)SELHTSGILGPETLR","pept98221711",1]
["IPI00328308","Tax_Id=9606 Gene_Symbol=ZNF804B Zinc finger protein       804B","NQESLGSPHICDLGK",1733.7422,2,11,1733.7444,5.8,"1pST",559,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,9205,8884,43.8284,"29.79 NQEpSLGSPHICDLGK b4/y12 ,43.83 NQESLGpSPHICDLGK b7/y9 ,","R","V","43.83 NQESLGpSPHICDLGK b7/y9 ,",-777.777,"S877",1,"NaN",0,"NaN",0,"NQESLGpSPHICDLGK","pept98221838",1]
["IPI00302592","Tax_Id=9606 Gene_Symbol=FLNA Isoform 2 of   Filamin-A","APSVANVGSHCDLSLK",1733.776,2,34,1733.7808,31.2,"1pST",7,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",34,5342,6276,21.0318,"21.03 APpSVANVGSHCDLSLK b3/y14 ,17.32 APSVANVGpSHCDLSLK b9/y8 ,6.70 APSVANVGSHCDLpSLK b14/y3 ,","R","I","21.03 APpSVANVGSHCDLSLK b3/y14 ,",-777.777,"S2144;S2150",2,"NaN",0,"NaN",0,"AP(p)SVANVG(p)SHCDLSLK","pept14811312",1]
["IPI00300371","Tax_Id=9606 Gene_Symbol=SF3B3 Isoform 1 of Splicing factor       3B subunit 3","QKNVSEELDR",1296.5626,3,25,1296.5711,11.4,"1pST",240,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",25,6775,4493,30.3652,"30.37 QKNVpSEELDR b5/y6 ,","K","T","30.37 QKNVpSEELDR b5/y6 ,",-777.777,"S1194",1,"NaN",0,"NaN",0,"QKNVpSEELDR","pept14811337",1]
["IPI00221325","Tax_Id=9606 Gene_Symbol=RANBP2 E3 SUMO-protein ligase       RanBP2","EDALDDSVSSSSVHASPLASSPVR",2492.1207,3,17,2492.1068,5.5,"1pST",408,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",17,7109,9740,38.5607,"14.95 EDALDDpSVSSSSVHASPLASSPVR b7/y18 ,11.91 EDALDDSVpSSSSVHASPLASSPVR b9/y16 ,11.91 EDALDDSVSpSSSVHASPLASSPVR b10/y15 ,15.35 EDALDDSVSSpSSVHASPLASSPVR b11/y14 ,19.70 EDALDDSVSSSpSVHASPLASSPVR b12/y13 ,28.88 EDALDDSVSSSSVHApSPLASSPVR b16/y9 ,38.56 EDALDDSVSSSSVHASPLApSSPVR b20/y5 ,38.10 EDALDDSVSSSSVHASPLASpSPVR b21/y4 ,","R","K","38.56 EDALDDSVSSSSVHASPLApSSPVR b20/y5 ,",-777.777,"S2250;S2251",2,"NaN",0,"NaN",0,"EDALDDSVSSSSVHASPLA(p)S(p)SPVR","pept13887522",1]
["IPI00021812","Tax_Id=9606 Gene_Symbol=AHNAK Neuroblast       differentiation-associated protein AHNAK","LKSEDGVEGDLGETQSR",1898.8213,3,11,1898.8259,4.9,"1pST",1,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",11,3869,7653,44.7515,"44.75 LKpSEDGVEGDLGETQSR b3/y15 ,7.72 LKSEDGVEGDLGEpTQSR b14/y4 ,6.41 LKSEDGVEGDLGETQpSR b16/y2 ,","R","T","44.75 LKpSEDGVEGDLGETQSR b3/y15 ,",-777.777,"S135",1,"NaN",0,"NaN",0,"LKpSEDGVEGDLGETQSR","pept13887485",1]
["IPI00021448","Tax_Id=9606 Gene_Symbol=PIK3R1 Isoform 1 of       Phosphatidylinositol 3-kinase regulatory subunit alpha","VLSEIFSPMLFR",1533.7159,2,14,1533.7302,7.9,"1oxM 1pST",591,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",14,8547,7445,41.7734,"41.77 VLpSEIFSPMoxLFR b3/y10 b9/y4 ,9.49 VLSEIFpSPMoxLFR b7/y6 b9/y4 ,","R","F","41.77 VLpSEIFSPMoxLFR b3/y10 b9/y4 ,",-777.777,"S265",1,"NaN",0,"NaN",0,"VLpSEIFSPMLFR","pept98221858",1]
["IPI00418316","Tax_Id=9606 Gene_Symbol=ZMYND8 cDNA FLJ55380, highly       similar to Protein kinase C-binding protein 1","RISLSDMPR",1153.5307,2,18,1153.5315,5.7,"1pST",295,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",18,5605,3791,37.8835,"37.88 RIpSLSDMPR b3/y7 ,31.00 RISLpSDMPR b5/y5 ,","R","S","37.88 RIpSLSDMPR b3/y7 ,",-777.777,"S452",1,"NaN",0,"NaN",0,"RIpSLSDMPR","pept14811350",1]
["IPI00302592","Tax_Id=9606 Gene_Symbol=FLNA Isoform 2 of   Filamin-A","APSVANVGSHCDLSLK",1733.7742,3,31,1733.7808,24.6,"1pST",13,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",31,6041,8908,26.1557,"26.16 APpSVANVGSHCDLSLK b3/y14 ,6.42 APSVANVGpSHCDLSLK b9/y8 ,6.35 APSVANVGSHCDLpSLK b14/y3 ,","R","I","26.16 APpSVANVGSHCDLSLK b3/y14 ,",-777.777,"S2144",1,"NaN",0,"NaN",0,"APpSVANVGSHCDLSLK","pept98221691",1]
["IPI00032473","Tax_Id=9606 Gene_Symbol=PPIL3 Isoform 2 of Peptidyl-prolyl       cis-trans isomerase-like 3","MSVTLHTDVGDIK",1494.6689,2,12,1494.679,6.4,"1pST",424,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",12,5544,5251,46.425,"6.87 MpSVTLHTDVGDIK b2/y12 ,32.64 MSVpTLHTDVGDIK b4/y10 ,46.43 MSVTLHpTDVGDIK b7/y7 ,","-","I","46.43 MSVTLHpTDVGDIK b7/y7 ,",-777.777,"NaN",0,"T7",1,"NaN",0,"MSVTLHpTDVGDIK","pept14811404",1]
["IPI00302135","Tax_Id=9606 Gene_Symbol=SPATA16 Spermatogenesis-associated       protein 16","LQYASLLSQLQRVK",1805.9022,2,18,1805.8842,8,"1pST 1pY",532,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",18,11172,9405,40.4832,"20.84 LQpYApSLLSQLQRVK b3/y12 b5/y10 ,40.48 LQpYASLLpSQLQRVK b3/y12 b8/y7 ,","K","E","40.48 LQpYASLLpSQLQRVK b3/y12 b8/y7 ,",-777.777,"S466",1,"NaN",0,"Y461",1,"LQpYASLLpSQLQRVK","pept98221821",1]
["IPI00179357","Tax_Id=9606 Gene_Symbol=TTN Isoform 7 of   Titin","SSISLGWKPPAKDGGSPIK",2083.9735,2,18,2083.9744,0,"2pST",331,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",18,10756,11307,40.5038,"7.18 pSpSISLGWKPPAKDGGSPIK b1/y19 b2/y18 ,7.13 pSSIpSLGWKPPAKDGGSPIK b1/y19 b4/y16 ,7.11 SpSIpSLGWKPPAKDGGSPIK b2/y18 b4/y16 ,39.68 pSSISLGWKPPAKDGGpSPIK b1/y19 b16/y4 ,40.09 SpSISLGWKPPAKDGGpSPIK b2/y18 b16/y4 ,40.50 SSIpSLGWKPPAKDGGpSPIK b4/y16 b16/y4 ,","K","G","40.50 SSIpSLGWKPPAKDGGpSPIK b4/y16 b16/y4 ,",-777.777,"S15926;S15911;S15912;S15914",4,"NaN",0,"NaN",0,"(p)S(p)SI(p)SLGWKPPAKDGGpSPIK","pept98221769",1]
["IPI00022608","Tax_Id=9606 Gene_Symbol=SORL1 Sortilin-related     receptor","STVFTIFGSNK",1279.5746,2,14,1279.585,0,"1pST",411,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",14,5860,4733,44.5172,"29.31 pSTVFTIFGSNK b1/y11 ,35.94 SpTVFTIFGSNK b2/y10 ,44.52 STVFpTIFGSNK b5/y7 ,29.31 STVFTIFGpSNK b9/y3 ,","K","E","44.52 STVFpTIFGSNK b5/y7 ,",-777.777,"NaN",0,"T598",1,"NaN",0,"STVFpTIFGSNK","pept13887524",1]
["IPI00742944","Tax_Id=9606 Gene_Symbol=FMN2 Formin-2","ADGGLAAGLSRSADWTEELGARTPR",2636.223,3,12,2636.2344,0.5,"1pST",401,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",12,3198,9514,46.9081,"25.09 ADGGLAAGLpSRSADWTEELGARTPR b10/y16 ,30.44 ADGGLAAGLSRpSADWTEELGARTPR b12/y14 ,35.80 ADGGLAAGLSRSADWpTEELGARTPR b16/y10 ,46.91 ADGGLAAGLSRSADWTEELGARpTPR b23/y3 ,","R","V","46.91 ADGGLAAGLSRSADWTEELGARpTPR b23/y3 ,",-777.777,"NaN",0,"T636",1,"NaN",0,"ADGGLAAGLSRSADWTEELGARpTPR","pept14811390",1]
["IPI00012546","Tax_Id=9606 Gene_Symbol=PCDHGA10 Isoform 2 of Protocadherin       gamma-A10","LPDTQLLKFQLNK",1636.8751,3,17,1636.8589,0.4,"1pST",84,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1000.raw",17,11871,3665,41.9535,"41.95 LPDpTQLLKFQLNK b4/y10 ,","K","Y","41.95 LPDpTQLLKFQLNK b4/y10 ,",-777.777,"NaN",0,"T291",1,"NaN",0,"LPDpTQLLKFQLNK","pept14555347",1]
["IPI00037283","Tax_Id=9606 Gene_Symbol=DNM1L Isoform 5 of Dynamin-1-like       protein","SKPIPIMPASPQK",1472.7406,2,20,1472.7462,14.2,"1pST",208,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",20,5510,4615,39.2847,"6.66 pSKPIPIMPASPQK b1/y13 ,39.28 SKPIPIMPApSPQK b10/y4 ,","K","G","39.28 SKPIPIMPApSPQK b10/y4 ,",-777.777,"S590",1,"NaN",0,"NaN",0,"SKPIPIMPApSPQK","pept14282575",1]
["IPI00016387","Tax_Id=9606 Gene_Symbol=PCF11 Pre-mRNA cleavage complex 2       protein Pcf11","MIFEGPNKLSPR",1467.7075,2,12,1467.6945,2.5,"1pST",640,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,10535,7051,47.5607,"47.56 MIFEGPNKLpSPR b10/y3 ,","K","I","47.56 MIFEGPNKLpSPR b10/y3 ,",-777.777,"S777",1,"NaN",0,"NaN",0,"MIFEGPNKLpSPR","pept98221886",1]
["IPI00102752","Tax_Id=9606 Gene_Symbol=RBM15 Isoform 1 of Putative       RNA-binding protein 15","LLLERPSPIR",1272.6965,2,12,1272.6955,12.3,"1pST",166,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",12,6981,3979,48.8338,"48.83 LLLERPpSPIR b7/y4 ,","R","D","48.83 LLLERPpSPIR b7/y4 ,",-777.777,"S700",1,"NaN",0,"NaN",0,"LLLERPpSPIR","pept14282566",1]
["IPI00418316","Tax_Id=9606 Gene_Symbol=ZMYND8 cDNA FLJ55380, highly       similar to Protein kinase C-binding protein 1","RISLSDMPR",1153.5307,2,15,1153.5315,9.6,"1pST",295,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",15,5604,3790,46.0429,"46.04 RIpSLSDMPR b3/y7 ,24.06 RISLpSDMPR b5/y5 ,","R","S","46.04 RIpSLSDMPR b3/y7 ,",-777.777,"S452",1,"NaN",0,"NaN",0,"RIpSLSDMPR","pept14811349",1]
["IPI00216348","Tax_Id=9606 Gene_Symbol=DYNC1I2 Isoform 2C of Cytoplasmic       dynein 1 intermediate chain 2","EAEALLQSMGLTPESPIVPPPMSPSSK",2872.352,3,20,2872.3639,0.5,"1pST",245,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",20,13927,14244,41.1596,"8.06 EAEALLQpSMGLTPESPIVPPPMSPSSK b8/y20 ,7.51 EAEALLQSMGLpTPESPIVPPPMSPSSK b12/y16 ,10.40 EAEALLQSMGLTPEpSPIVPPPMSPSSK b15/y13 ,41.16 EAEALLQSMGLTPESPIVPPPMpSPSSK b23/y5 ,40.38 EAEALLQSMGLTPESPIVPPPMSPpSSK b25/y3 ,40.38 EAEALLQSMGLTPESPIVPPPMSPSpSK b26/y2 ,","R","S","41.16 EAEALLQSMGLTPESPIVPPPMpSPSSK b23/y5 ,",-777.777,"S81;S83;S84",3,"NaN",0,"NaN",0,"EAEALLQSMGLTPESPIVPPPM(p)SP(p)S(p)SK","pept98221748",1]
["IPI00217872","Tax_Id=9606 Gene_Symbol=PGM1 Isoform 2 of       Phosphoglucomutase-1","AIGGIILTASHNPGGPNGDFGIK",2285.1099,3,10,2285.1205,1.3,"1pST",149,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",10,10272,12325,51.3227,"51.32 AIGGIILpTASHNPGGPNGDFGIK b8/y16 ,51.32 AIGGIILTApSHNPGGPNGDFGIK b10/y14 ,","K","F","51.32 AIGGIILpTASHNPGGPNGDFGIK b8/y16 ,51.32 AIGGIILTApSHNPGGPNGDFGIK b10/y14 ,",-777.777,"S135",1,"T133",1,"NaN",0,"AIGGIIL(p)TA(p)SHNPGGPNGDFGIK","pept98221727",1]
["IPI00302592","Tax_Id=9606 Gene_Symbol=FLNA Isoform 2 of   Filamin-A","APSVANVGSHCDLSLK",1733.7748,2,31,1733.7808,20,"1pST",13,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",31,6044,8910,30.4412,"30.44 APpSVANVGSHCDLSLK b3/y14 ,9.82 APSVANVGpSHCDLSLK b9/y8 ,6.53 APSVANVGSHCDLpSLK b14/y3 ,","R","I","30.44 APpSVANVGSHCDLSLK b3/y14 ,",-777.777,"S2144",1,"NaN",0,"NaN",0,"APpSVANVGSHCDLSLK","pept98221693",1]
["IPI00018274","Tax_Id=9606 Gene_Symbol=EGFR Isoform 1 of Epidermal growth       factor receptor","ELVEPLTPSGEAPNQALLR",2113.0394,2,20,2113.0456,10.7,"1pST",334,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",20,9492,11483,41.49,"41.49 ELVEPLpTPSGEAPNQALLR b7/y13 ,24.41 ELVEPLTPpSGEAPNQALLR b9/y11 ,","R","I","41.49 ELVEPLpTPSGEAPNQALLR b7/y13 ,",-777.777,"NaN",0,"T693",1,"NaN",0,"ELVEPLpTPSGEAPNQALLR","pept98221776",1]
["IPI00219301","Tax_Id=9606 Gene_Symbol=MARCKS Myristoylated alanine-rich       C-kinase substrate","EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK",2994.2763,3,18,2994.2615,1.2,"1pST",302,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",18,5632,14470,44.2284,"34.18 EAPAEGEAAEPGpSPTAAEGEAASAASSTSSPK b13/y20 ,39.62 EAPAEGEAAEPGSPpTAAEGEAASAASSTSSPK b15/y18 ,44.23 EAPAEGEAAEPGSPTAAEGEAApSAASSTSSPK b23/y10 ,24.57 EAPAEGEAAEPGSPTAAEGEAASAApSSTSSPK b26/y7 ,20.44 EAPAEGEAAEPGSPTAAEGEAASAASpSTSSPK b27/y6 ,20.44 EAPAEGEAAEPGSPTAAEGEAASAASSpTSSPK b28/y5 ,20.44 EAPAEGEAAEPGSPTAAEGEAASAASSTpSSPK b29/y4 ,16.81 EAPAEGEAAEPGSPTAAEGEAASAASSTSpSPK b30/y3 ,","K","A","44.23 EAPAEGEAAEPGSPTAAEGEAApSAASSTSSPK b23/y10 ,",-777.777,"S128",1,"T120",1,"NaN",0,"EAPAEGEAAEPGSP(p)TAAEGEAA(p)SAASSTSSPK","pept98221764",1]
["IPI00011069","Tax_Id=9606 Gene_Symbol=UNG Isoform 2 of Uracil-DNA       glycosylase","HAPSPEPAVQGTGVAGVPEESGDAAAIPAK",2889.3473,3,23,2889.3546,5,"1pST",453,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",23,6560,14269,39.2459,"39.25 HAPpSPEPAVQGTGVAGVPEESGDAAAIPAK b4/y27 ,30.04 HAPSPEPAVQGpTGVAGVPEESGDAAAIPAK b12/y19 ,8.55 HAPSPEPAVQGTGVAGVPEEpSGDAAAIPAK b21/y10 ,","R","K","39.25 HAPpSPEPAVQGTGVAGVPEESGDAAAIPAK b4/y27 ,",-777.777,"S23",1,"NaN",0,"NaN",0,"HAPpSPEPAVQGTGVAGVPEESGDAAAIPAK","pept98221800",1]
["IPI00014575","Tax_Id=9606 Gene_Symbol=CDC6 Cell division control protein       6 homolog","LVLNTAVPDRLPAR",1613.8727,2,13,1613.8654,9.6,"1pST",617,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,12380,7871,49.2685,"49.27 LVLNpTAVPDRLPAR b5/y10 ,","K","E","49.27 LVLNpTAVPDRLPAR b5/y10 ,",-777.777,"NaN",0,"T166",1,"NaN",0,"LVLNpTAVPDRLPAR","pept98221873",1]
["IPI00297116","Tax_Id=9606 Gene_Symbol=PLEKHA4 Isoform 1 of Pleckstrin       homology domain-containing family A member 4","LLTLGRTLSPAR",1376.753,2,20,1376.7541,1,"1pST",213,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",20,11839,4355,42.4339,"17.94 LLpTLGRTLSPAR b3/y10 ,35.94 LLTLGRpTLSPAR b7/y6 ,42.43 LLTLGRTLpSPAR b9/y4 ,","R","R","42.43 LLTLGRTLpSPAR b9/y4 ,",-777.777,"S624",1,"NaN",0,"NaN",0,"LLTLGRTLpSPAR","pept14282579",1]
["IPI00008529","Tax_Id=9606 Gene_Symbol=RPLP2 60S acidic ribosomal protein       P2","KEESEESDDDMGFGLFD",2028.7109,2,28,2028.7184,5.1,"1pST",73,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",28,12051,10963,34.9388,"28.50 KEEpSEESDDDMGFGLFD b4/y14 ,34.94 KEESEEpSDDDMGFGLFD b7/y11 ,","K","-","34.94 KEESEEpSDDDMGFGLFD b7/y11 ,",-777.777,"S105",1,"NaN",0,"NaN",0,"KEESEEpSDDDMGFGLFD","pept98221716",1]
["IPI00061356","Tax_Id=9606 Gene_Symbol=CCDC99 Isoform 1 of Coiled-coil       domain-containing protein 99","SVSIHTPVVSLSPHK",1666.844,3,22,1666.8444,2.7,"1pST",98,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",22,6266,4154,41.4463,"6.41 pSVSIHTPVVSLSPHK b1/y15 ,7.92 SVpSIHTPVVSLSPHK b3/y13 ,10.89 SVSIHpTPVVSLSPHK b6/y10 ,41.45 SVSIHTPVVpSLSPHK b10/y6 ,41.45 SVSIHTPVVSLpSPHK b12/y4 ,","K","N","41.45 SVSIHTPVVpSLSPHK b10/y6 ,41.45 SVSIHTPVVSLpSPHK b12/y4 ,",-777.777,"S513;S515",2,"NaN",0,"NaN",0,"SVSIHTPVV(p)SL(p)SPHK","pept14422636",1]
["IPI00008918","Tax_Id=9606 Gene_Symbol=LIMA1 Isoform Beta of LIM domain       and actin-binding protein 1","ETPHSPGVEDAPIAK",1626.7252,3,28,1626.729,10.7,"1pST",250,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",28,3345,6202,35.9364,"34.78 EpTPHSPGVEDAPIAK b2/y14 ,35.94 ETPHpSPGVEDAPIAK b5/y11 ,","R","V","35.94 ETPHpSPGVEDAPIAK b5/y11 ,",-777.777,"S490",1,"T487",1,"NaN",0,"E(p)TPH(p)SPGVEDAPIAK","pept13887500",1]
["IPI00064767","Tax_Id=9606 Gene_Symbol=ARHGAP17 Isoform 1 of Rho       GTPase-activating protein 17","SPSPPTQHTGQPPGQPSAPSQLSAPR",2686.2495,3,21,2686.2501,0,"1pST",271,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",21,4154,9631,43.1993,"42.78 pSPSPPTQHTGQPPGQPSAPSQLSAPR b1/y26 ,43.20 SPpSPPTQHTGQPPGQPSAPSQLSAPR b3/y24 ,38.10 SPSPPpTQHTGQPPGQPSAPSQLSAPR b6/y21 ,38.49 SPSPPTQHpTGQPPGQPSAPSQLSAPR b9/y18 ,8.88 SPSPPTQHTGQPPGQPpSAPSQLSAPR b17/y10 ,7.59 SPSPPTQHTGQPPGQPSAPpSQLSAPR b20/y7 ,7.18 SPSPPTQHTGQPPGQPSAPSQLpSAPR b23/y4 ,","R","R","43.20 SPpSPPTQHTGQPPGQPSAPSQLSAPR b3/y24 ,",-777.777,"S674;S676",2,"NaN",0,"NaN",0,"(p)SP(p)SPPTQHTGQPPGQPSAPSQLSAPR","pept14811344",1]
["IPI00177498","Tax_Id=9606 Gene_Symbol=LIMCH1 Isoform 3 of LIM and       calponin homology domains-containing protein 1","SPEPEATLTFPFLDK",1770.806,2,19,1770.8117,7.9,"1pST",438,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",19,13778,9167,45.9226,"45.92 pSPEPEATLTFPFLDK b1/y15 ,23.08 SPEPEApTLTFPFLDK b7/y9 ,23.08 SPEPEATLpTFPFLDK b9/y7 ,","K","M","45.92 pSPEPEATLTFPFLDK b1/y15 ,",-777.777,"S1262",1,"NaN",0,"NaN",0,"pSPEPEATLTFPFLDK","pept98221792",1]
["IPI00177498","Tax_Id=9606 Gene_Symbol=LIMCH1 Isoform 3 of LIM and       calponin homology domains-containing protein 1","SPEPEATLTFPFLDK",1770.806,2,26,1770.8117,10.3,"1pST",438,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",26,13779,9168,39.7846,"39.78 pSPEPEATLTFPFLDK b1/y15 ,24.15 SPEPEApTLTFPFLDK b7/y9 ,19.10 SPEPEATLpTFPFLDK b9/y7 ,","K","M","39.78 pSPEPEATLTFPFLDK b1/y15 ,",-777.777,"S1262",1,"NaN",0,"NaN",0,"pSPEPEATLTFPFLDK","pept98221793",1]
["IPI00023048","Tax_Id=9606 Gene_Symbol=EEF1D Elongation factor     1-delta","KPATPAEDDEDDDIDLFGSDNEEEDK",2988.1444,3,32,2988.1557,29.5,"1pST",225,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",32,7756,14453,33.9022,"9.78 KPApTPAEDDEDDDIDLFGSDNEEEDK b4/y23 ,33.90 KPATPAEDDEDDDIDLFGpSDNEEEDK b19/y8 ,","K","E","33.90 KPATPAEDDEDDDIDLFGpSDNEEEDK b19/y8 ,",-777.777,"S162",1,"NaN",0,"NaN",0,"KPATPAEDDEDDDIDLFGpSDNEEEDK","pept98221739",1]
["IPI00027264","Tax_Id=9606 Gene_Symbol=CALB2 Calretinin","DLEIVLCSEPPM",1481.6284,2,12,1481.6183,4.3,"1pST",400,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",12,8924,5529,54.0865,"54.09 DLEIVLCpSEPPM b8/y5 ,","K","-","54.09 DLEIVLCpSEPPM b8/y5 ,",-777.777,"S267",1,"NaN",0,"NaN",0,"DLEIVLCpSEPPM","pept13887516",1]
["IPI00887650","Tax_Id=9606 Gene_Symbol=LOC390561 similar to GOLGA8A       protein","LQHSPEHFETK",1431.6325,3,28,1431.6184,16.6,"1pST",74,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",28,6724,3602,38.4286,"15.49 LQHpSPEHFETK b4/y8 ,38.43 LQHSPEHFEpTK b10/y2 ,","R","W","38.43 LQHSPEHFEpTK b10/y2 ,",-777.777,"NaN",0,"T805",1,"NaN",0,"LQHSPEHFEpTK","pept14422631",1]
["IPI00179890","Tax_Id=9606 Gene_Symbol=G3BP2 Isoform B of Ras       GTPase-activating protein-binding protein 2","STTPPPAEPVSLPQEPPKPR",2204.083,3,11,2204.0878,3.6,"1pST",388,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",11,5426,8245,55.5951,"46.43 pSTTPPPAEPVSLPQEPPKPR b1/y20 ,47.11 SpTTPPPAEPVSLPQEPPKPR b2/y19 ,55.60 STpTPPPAEPVSLPQEPPKPR b3/y18 ,17.02 STTPPPAEPVpSLPQEPPKPR b11/y10 ,","K","V","55.60 STpTPPPAEPVSLPQEPPKPR b3/y18 ,",-777.777,"NaN",0,"T227",1,"NaN",0,"STpTPPPAEPVSLPQEPPKPR","pept14811382",1]
["IPI00911038","Tax_Id=9606 Gene_Symbol=- cDNA FLJ50838, highly similar to       Apoptotic chromatin condensation inducer in thenucleus   (Fragment)","ELLVPQHTVQLVGGLSPLSSPSDTK",2681.36,3,17,2681.3677,0.1,"1pST",529,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,11701,13621,49.689,"18.48 ELLVPQHpTVQLVGGLSPLSSPSDTK b8/y18 ,49.69 ELLVPQHTVQLVGGLpSPLSSPSDTK b16/y10 ,36.99 ELLVPQHTVQLVGGLSPLpSSPSDTK b19/y7 ,26.78 ELLVPQHTVQLVGGLSPLSpSPSDTK b20/y6 ,22.04 ELLVPQHTVQLVGGLSPLSSPpSDTK b22/y4 ,22.04 ELLVPQHTVQLVGGLSPLSSPSDpTK b24/y2 ,","R","A","49.69 ELLVPQHTVQLVGGLpSPLSSPSDTK b16/y10 ,",-777.777,"S380",1,"NaN",0,"NaN",0,"ELLVPQHTVQLVGGLpSPLSSPSDTK","pept98221818",1]
["IPI00220038","Tax_Id=9606 Gene_Symbol=ARS2 Isoform 2 of       Arsenite-resistance protein 2","TQLWASEPGTPPLPTSLPSQNPILK",2751.3817,3,22,2751.3884,2.1,"1pST",112,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",22,13039,13858,44.7516,"17.94 pTQLWASEPGTPPLPTSLPSQNPILK b1/y25 ,38.10 TQLWApSEPGTPPLPTSLPSQNPILK b6/y20 ,44.75 TQLWASEPGpTPPLPTSLPSQNPILK b10/y16 ,32.77 TQLWASEPGTPPLPpTSLPSQNPILK b15/y11 ,32.77 TQLWASEPGTPPLPTpSLPSQNPILK b16/y10 ,18.17 TQLWASEPGTPPLPTSLPpSQNPILK b19/y7 ,","R","N","44.75 TQLWASEPGpTPPLPTSLPSQNPILK b10/y16 ,",-777.777,"NaN",0,"T544",1,"NaN",0,"TQLWASEPGpTPPLPTSLPSQNPILK","pept98221720",1]
["IPI00220219","Tax_Id=9606 Gene_Symbol=COPB2 Coatomer subunit   beta'","STAQQELDGKPASPTPVIVASHTANK",2726.325,3,20,2726.3276,5.2,"1pST",134,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",20,5754,13749,46.9671,"23.65 pSTAQQELDGKPASPTPVIVASHTANK b1/y26 ,23.65 SpTAQQELDGKPASPTPVIVASHTANK b2/y25 ,46.97 STAQQELDGKPApSPTPVIVASHTANK b13/y14 ,34.69 STAQQELDGKPASPpTPVIVASHTANK b15/y12 ,12.58 STAQQELDGKPASPTPVIVApSHTANK b21/y6 ,15.82 STAQQELDGKPASPTPVIVASHpTANK b23/y4 ,","R","E","46.97 STAQQELDGKPApSPTPVIVASHTANK b13/y14 ,",-777.777,"S859",1,"NaN",0,"NaN",0,"STAQQELDGKPApSPTPVIVASHTANK","pept98221725",1]
["IPI00013437","Tax_Id=9606 Gene_Symbol=ZNF91 Zinc finger protein   91","LSTLTKHK",1006.5126,2,25,1006.5212,10.3,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",25,8495,3255,41.9905,"41.99 LpSTLTKHK b2/y7 ,34.54 LSpTLTKHK b3/y6 ,26.30 LSTLpTKHK b5/y4 ,","R","I","41.99 LpSTLTKHK b2/y7 ,",-777.777,"S391",1,"NaN",0,"NaN",0,"LpSTLTKHK","pept14282570",1]
["IPI00030968","Tax_Id=9606 Gene_Symbol=C9orf142 Isoform 1 of       Uncharacterized protein C9orf142","LAAAEETAVSPR",1293.6001,2,17,1293.5966,14,"1pST",283,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,2936,6143,50.0223,"29.31 LAAAEEpTAVSPR b7/y6 ,50.02 LAAAEETAVpSPR b10/y3 ,","R","K","50.02 LAAAEETAVpSPR b10/y3 ,",-777.777,"S148",1,"NaN",0,"NaN",0,"LAAAEETAVpSPR","pept98221755",1]
["IPI00177498","Tax_Id=9606 Gene_Symbol=LIMCH1 Isoform 3 of LIM and       calponin homology domains-containing protein 1","SPEPEATLTFPFLDK",1770.8017,2,16,1770.8117,11.5,"1pST",438,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",16,13785,9165,51.0622,"51.06 pSPEPEATLTFPFLDK b1/y15 ,22.07 SPEPEApTLTFPFLDK b7/y9 ,17.44 SPEPEATLpTFPFLDK b9/y7 ,","K","M","51.06 pSPEPEATLTFPFLDK b1/y15 ,",-777.777,"S1262",1,"NaN",0,"NaN",0,"pSPEPEATLTFPFLDK","pept98221794",1]
["IPI00027280","Tax_Id=9606 Gene_Symbol=TOP2B Isoform Beta-2 of DNA       topoisomerase 2-beta","FDSNEEDSASVFSPSFGLK",2141.8771,2,17,2141.8831,8.7,"1pST",530,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,11551,11674,50.7474,"50.75 FDpSNEEDSASVFSPSFGLK b3/y17 ,34.03 FDSNEEDpSASVFSPSFGLK b8/y12 ,28.50 FDSNEEDSApSVFSPSFGLK b10/y10 ,11.61 FDSNEEDSASVFpSPSFGLK b13/y7 ,7.21 FDSNEEDSASVFSPpSFGLK b15/y5 ,","K","Q","50.75 FDpSNEEDSASVFSPSFGLK b3/y17 ,",-777.777,"S1466",1,"NaN",0,"NaN",0,"FDpSNEEDSASVFSPSFGLK","pept98221819",1]
["IPI00396171","Tax_Id=9606 Gene_Symbol=MAP4 Isoform 1 of       Microtubule-associated protein 4","DMESPTKLDVTLAK",1626.751,2,28,1626.7576,5.5,"1pST",32,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",28,7624,6209,40.8811,"40.88 DMEpSPTKLDVTLAK b4/y11 ,28.92 DMESPpTKLDVTLAK b6/y9 ,10.45 DMESPTKLDVpTLAK b11/y4 ,","K","D","40.88 DMEpSPTKLDVTLAK b4/y11 ,",-777.777,"S280",1,"NaN",0,"NaN",0,"DMEpSPTKLDVTLAK","pept13887491",1]
["IPI00028193","Tax_Id=9606 Gene_Symbol=KNDC1 192 kDa   protein","FCDLYWDEK",1354.4901,2,17,1354.4941,13.6,"1pY",306,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",17,8939,4726,52.96,"52.96 FCDLpYWDEK b5/y5 ,","K","L","52.96 FCDLpYWDEK b5/y5 ,",-777.777,"NaN",0,"NaN",0,"Y948",1,"FCDLpYWDEK","pept14811351",1]
["IPI00185919","Tax_Id=9606 Gene_Symbol=LARP1 Isoform 1 of La-related       protein 1","GLSASLPDLDSENWIEVK",2051.9391,2,18,2051.9452,1.5,"1pST",509,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",18,13377,11102,52.5017,"44.75 GLpSASLPDLDSENWIEVK b3/y16 ,52.50 GLSApSLPDLDSENWIEVK b5/y14 ,18.91 GLSASLPDLDpSENWIEVK b11/y8 ,","K","K","52.50 GLSApSLPDLDSENWIEVK b5/y14 ,",-777.777,"S548",1,"NaN",0,"NaN",0,"GLSApSLPDLDSENWIEVK","pept98221809",1]
["IPI00479997","Tax_Id=9606 Gene_Symbol=STMN1 Stathmin","ESVPEFPLSPPK",1405.6473,2,15,1405.653,10.5,"1pST",294,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",15,8833,6705,55.5951,"27.87 EpSVPEFPLSPPK b2/y11 ,55.60 ESVPEFPLpSPPK b9/y4 ,","K","K","55.60 ESVPEFPLpSPPK b9/y4 ,",-777.777,"S38",1,"NaN",0,"NaN",0,"ESVPEFPLpSPPK","pept98221759",1]
["IPI00185919","Tax_Id=9606 Gene_Symbol=LARP1 Isoform 1 of La-related       protein 1","GLSASLPDLDSENWIEVK",2051.9391,2,17,2051.9452,1.5,"1pST",509,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,13378,11103,53.7206,"45.81 GLpSASLPDLDSENWIEVK b3/y16 ,53.72 GLSApSLPDLDSENWIEVK b5/y14 ,11.91 GLSASLPDLDpSENWIEVK b11/y8 ,","K","K","53.72 GLSApSLPDLDSENWIEVK b5/y14 ,",-777.777,"S548",1,"NaN",0,"NaN",0,"GLSApSLPDLDSENWIEVK","pept98221810",1]
["IPI00102808","Tax_Id=9606 Gene_Symbol=DUSP19 Isoform 1 of Dual       specificity protein phosphatase 19","VTTLTGKK",1006.4587,2,20,1006.4501,8,"2pST",209,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",20,8479,3254,50.9609,"34.41 VpTpTLTGKK b2/y7 b3/y6 ,50.96 VpTTLpTGKK b2/y7 b5/y4 ,42.72 VTpTLpTGKK b3/y6 b5/y4 ,","R","I","50.96 VpTTLpTGKK b2/y7 b5/y4 ,",-777.777,"NaN",0,"T24;T27",2,"NaN",0,"VpTTLpTGKK","pept14282576",1]
["IPI00220740","Tax_Id=9606 Gene_Symbol=NPM1 Isoform 2 of     Nucleophosmin","DELHIVEAEAMNYEGSPIK",2223.9741,3,26,2223.9759,19.7,"1pST",11,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",26,10026,8310,46.0429,"46.04 DELHIVEAEAMNYEGpSPIK b16/y4 ,","K","V","46.04 DELHIVEAEAMNYEGpSPIK b16/y4 ,",-777.777,"S70",1,"NaN",0,"NaN",0,"DELHIVEAEAMNYEGpSPIK","pept14811314",1]
["IPI00911038","Tax_Id=9606 Gene_Symbol=- cDNA FLJ50838, highly similar to       Apoptotic chromatin condensation inducer in thenucleus   (Fragment)","ELLVPQHTVQLVGGLSPLSSPSDTK",2681.3602,3,18,2681.3677,1.6,"1pST",261,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",18,10969,9614,54.5921,"25.44 ELLVPQHpTVQLVGGLSPLSSPSDTK b8/y18 ,54.59 ELLVPQHTVQLVGGLpSPLSSPSDTK b16/y10 ,25.44 ELLVPQHTVQLVGGLSPLpSSPSDTK b19/y7 ,20.36 ELLVPQHTVQLVGGLSPLSpSPSDTK b20/y6 ,16.41 ELLVPQHTVQLVGGLSPLSSPpSDTK b22/y4 ,16.01 ELLVPQHTVQLVGGLSPLSSPSDpTK b24/y2 ,","R","A","54.59 ELLVPQHTVQLVGGLpSPLSSPSDTK b16/y10 ,",-777.777,"S380",1,"NaN",0,"NaN",0,"ELLVPQHTVQLVGGLpSPLSSPSDTK","pept14811343",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","DLFDYSPPLHK",1410.6163,2,12,1410.6221,5.8,"1pST",49,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,8567,6718,60.7763,"60.78 DLFDYpSPPLHK b6/y6 ,","K","N","60.78 DLFDYpSPPLHK b6/y6 ,",-777.777,"S512",1,"NaN",0,"NaN",0,"DLFDYpSPPLHK","pept98221706",1]
["IPI00037283","Tax_Id=9606 Gene_Symbol=DNM1L Isoform 5 of Dynamin-1-like       protein","SKPIPIMPASPQK",1472.7406,2,14,1472.7462,8.2,"1pST",208,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",14,5509,4614,58.7971,"11.04 pSKPIPIMPASPQK b1/y13 ,58.80 SKPIPIMPApSPQK b10/y4 ,","K","G","58.80 SKPIPIMPApSPQK b10/y4 ,",-777.777,"S590",1,"NaN",0,"NaN",0,"SKPIPIMPApSPQK","pept14282574",1]
["IPI00376199","Tax_Id=9606 Gene_Symbol=IRF2BP2 Isoform 1 of Interferon       regulatory factor 2-binding protein 2","IPMTPTSSFVSPPPPTASPHSNR",2484.1446,3,21,2484.1509,1,"1pST",201,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",21,7826,8003,52.5017,"11.47 IPMpTPTSSFVSPPPPTASPHSNR b4/y20 ,14.95 IPMTPpTSSFVSPPPPTASPHSNR b6/y18 ,14.95 IPMTPTpSSFVSPPPPTASPHSNR b7/y17 ,14.95 IPMTPTSpSFVSPPPPTASPHSNR b8/y16 ,18.91 IPMTPTSSFVpSPPPPTASPHSNR b11/y13 ,52.50 IPMTPTSSFVSPPPPpTASPHSNR b16/y8 ,51.91 IPMTPTSSFVSPPPPTApSPHSNR b18/y6 ,38.56 IPMTPTSSFVSPPPPTASPHpSNR b21/y3 ,","K","T","52.50 IPMTPTSSFVSPPPPpTASPHSNR b16/y8 ,",-777.777,"S406",1,"T404",1,"NaN",0,"IPMTPTSSFVSPPPP(p)TA(p)SPHSNR","pept14282573",1]
["IPI00027264","Tax_Id=9606 Gene_Symbol=CALB2 Calretinin","DLEIVLCSEPPM",1481.6292,2,11,1481.6183,7.2,"1pST",400,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",11,9121,5530,62.6598,"62.66 DLEIVLCpSEPPM b8/y5 ,","K","-","62.66 DLEIVLCpSEPPM b8/y5 ,",-777.777,"S267",1,"NaN",0,"NaN",0,"DLEIVLCpSEPPM","pept13887517",1]
["IPI00216049","Tax_Id=9606 Gene_Symbol=HNRNPK Isoform 1 of Heterogeneous       nuclear ribonucleoprotein K","IILDLISESPIK",1419.7572,2,13,1419.7626,4.3,"1pST",28,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,12273,6781,60.76,"44.52 IILDLIpSESPIK b7/y6 ,60.76 IILDLISEpSPIK b9/y4 ,","K","G","60.76 IILDLISEpSPIK b9/y4 ,",-777.777,"S216",1,"NaN",0,"NaN",0,"IILDLISEpSPIK","pept98221700",1]
["IPI00479997","Tax_Id=9606 Gene_Symbol=STMN1 Stathmin","ASGQAFELILSPR",1467.7075,2,23,1467.7123,19.7,"1pST",294,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",23,10536,7052,50.7948,"13.35 ApSGQAFELILSPR b2/y12 ,50.79 ASGQAFELILpSPR b11/y3 ,","R","S","50.79 ASGQAFELILpSPR b11/y3 ,",-777.777,"S25",1,"NaN",0,"NaN",0,"ASGQAFELILpSPR","pept98221762",1]
["IPI00021812","Tax_Id=9606 Gene_Symbol=AHNAK Neuroblast       differentiation-associated protein AHNAK","ASLGSLEGEAEAEASSPK",1811.7776,2,32,1811.7826,8.4,"1pST",1,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",32,7449,9480,42.2495,"8.54 ApSLGSLEGEAEAEASSPK b2/y17 ,10.95 ASLGpSLEGEAEAEASSPK b5/y14 ,36.77 ASLGSLEGEAEAEApSSPK b15/y4 ,42.25 ASLGSLEGEAEAEASpSPK b16/y3 ,","K","G","42.25 ASLGSLEGEAEAEASpSPK b16/y3 ,",-777.777,"S5763",1,"NaN",0,"NaN",0,"ASLGSLEGEAEAEASpSPK","pept98221688",1]
["IPI00411937","Tax_Id=9606 Gene_Symbol=NOP56 Nucleolar protein   5A","EELMSSDLEETAGSTSIPK",2102.8888,2,23,2102.8966,0,"1pST",274,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",23,8638,11412,51.3227,"51.32 EELMpSSDLEETAGSTSIPK b5/y15 ,44.75 EELMSpSDLEETAGSTSIPK b6/y14 ,14.19 EELMSSDLEEpTAGSTSIPK b11/y9 ,7.13 EELMSSDLEETAGpSTSIPK b14/y6 ,6.60 EELMSSDLEETAGSpTSIPK b15/y5 ,7.45 EELMSSDLEETAGSTpSIPK b16/y4 ,","K","R","51.32 EELMpSSDLEETAGSTSIPK b5/y15 ,",-777.777,"S519",1,"NaN",0,"NaN",0,"EELMpSSDLEETAGSTSIPK","pept98221753",1]
["IPI00911038","Tax_Id=9606 Gene_Symbol=- cDNA FLJ50838, highly similar to       Apoptotic chromatin condensation inducer in thenucleus   (Fragment)","ELLVPQHTVQLVGGLSPLSSPSDTK",2681.3714,3,18,2681.3677,7.7,"1pST",261,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",18,10962,9615,56.3793,"32.77 ELLVPQHpTVQLVGGLSPLSSPSDTK b8/y18 ,56.38 ELLVPQHTVQLVGGLpSPLSSPSDTK b16/y10 ,31.21 ELLVPQHTVQLVGGLSPLpSSPSDTK b19/y7 ,25.75 ELLVPQHTVQLVGGLSPLSpSPSDTK b20/y6 ,21.14 ELLVPQHTVQLVGGLSPLSSPpSDTK b22/y4 ,21.14 ELLVPQHTVQLVGGLSPLSSPSDpTK b24/y2 ,","R","A","56.38 ELLVPQHTVQLVGGLpSPLSSPSDTK b16/y10 ,",-777.777,"S380",1,"NaN",0,"NaN",0,"ELLVPQHTVQLVGGLpSPLSSPSDTK","pept14811341",1]
["IPI00002649","Tax_Id=9606 Gene_Symbol=PNN Isoform 2 of   Pinin","SLSPGKENVSALDMEK",1783.8159,2,33,1783.8063,2.9,"1pST",187,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",33,5647,6496,41.49,"34.90 pSLSPGKENVSALDMEK b1/y16 ,41.49 SLpSPGKENVSALDMEK b3/y14 ,9.49 SLSPGKENVpSALDMEK b10/y7 ,","K","E","41.49 SLpSPGKENVSALDMEK b3/y14 ,",-777.777,"S310",1,"NaN",0,"NaN",0,"SLpSPGKENVSALDMEK","pept14811331",1]
["IPI00012936","Tax_Id=9606 Gene_Symbol=CSF3R Isoform 1 of Granulocyte       colony-stimulating factor receptor","CDSTQPLLAGLTPSPK",1843.7971,3,12,1843.7828,5.6,"2pST",663,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,9512,9674,62.6598,"0.00 CDpSpTQPLLAGLTPSPK b3/y14 b4/y13 ,0.00 CDpSTQPLLAGLpTPSPK b3/y14 b12/y5 ,0.00 CDSpTQPLLAGLpTPSPK b4/y13 b12/y5 ,5.77 CDpSTQPLLAGLTPpSPK b3/y14 b14/y3 ,5.77 CDSpTQPLLAGLTPpSPK b4/y13 b14/y3 ,62.66 CDSTQPLLAGLpTPpSPK b12/y5 b14/y3 ,","R","S","62.66 CDSTQPLLAGLpTPpSPK b12/y5 b14/y3 ,",-777.777,"S783",1,"T781",1,"NaN",0,"CDSTQPLLAGLpTPpSPK","pept98221900",1]
["IPI00170778","Tax_Id=9606 Gene_Symbol=FNBP4 Formin-binding protein     4","RPILQLSPPGPR",1409.7508,3,19,1409.7544,16.5,"1pST",60,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",19,6491,3544,55.8304,"55.83 RPILQLpSPPGPR b7/y6 ,","R","G","55.83 RPILQLpSPPGPR b7/y6 ,",-777.777,"S18",1,"NaN",0,"NaN",0,"RPILQLpSPPGPR","pept14422628",1]
["IPI00012199","Tax_Id=9606 Gene_Symbol=CCDC86 Coiled-coil       domain-containing protein 86","LGGLRPESPESLTSVSR",1863.9126,2,17,1863.9091,6.8,"1pST",214,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",17,6590,6858,58.0218,"58.02 LGGLRPEpSPESLTSVSR b8/y10 ,29.79 LGGLRPESPEpSLTSVSR b11/y7 ,29.79 LGGLRPESPESLpTSVSR b13/y5 ,23.78 LGGLRPESPESLTpSVSR b14/y4 ,23.08 LGGLRPESPESLTSVpSR b16/y2 ,","R","T","58.02 LGGLRPEpSPESLTSVSR b8/y10 ,",-777.777,"S18",1,"NaN",0,"NaN",0,"LGGLRPEpSPESLTSVSR","pept14811334",1]
["IPI00302592","Tax_Id=9606 Gene_Symbol=FLNA Isoform 2 of   Filamin-A","APSVANVGSHCDLSLK",1733.776,2,30,1733.7808,17.3,"1pST",7,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",30,5343,6277,45.3315,"45.33 APpSVANVGSHCDLSLK b3/y14 ,13.84 APSVANVGpSHCDLSLK b9/y8 ,0.00 APSVANVGSHCDLpSLK b14/y3 ,","R","I","45.33 APpSVANVGSHCDLSLK b3/y14 ,",-777.777,"S2144",1,"NaN",0,"NaN",0,"APpSVANVGSHCDLSLK","pept14811313",1]
["IPI00216049","Tax_Id=9606 Gene_Symbol=HNRNPK Isoform 1 of Heterogeneous       nuclear ribonucleoprotein K","GSYGDLGGPIITTQVTIPK",1995.9835,2,22,1995.9918,17.9,"1pST",28,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",22,11082,10727,54.5921,"54.59 GpSYGDLGGPIITTQVTIPK b2/y18 ,17.48 GSYGDLGGPIIpTTQVTIPK b12/y8 ,10.83 GSYGDLGGPIITpTQVTIPK b13/y7 ,7.06 GSYGDLGGPIITTQVpTIPK b16/y4 ,","R","D","54.59 GpSYGDLGGPIITTQVTIPK b2/y18 ,",-777.777,"S379",1,"NaN",0,"NaN",0,"GpSYGDLGGPIITTQVTIPK","pept98221697",1]
["IPI00007764","Tax_Id=9606 Gene_Symbol=HN1 Isoform 1 of Hematological and       neurological expressed 1 protein","RNSSEASSGDFLDLK",1704.7312,2,23,1704.7356,0.4,"1pST",449,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",23,7114,8670,54.3728,"33.96 RNpSSEASSGDFLDLK b3/y13 ,54.37 RNSpSEASSGDFLDLK b4/y12 ,40.88 RNSSEApSSGDFLDLK b7/y9 ,40.88 RNSSEASpSGDFLDLK b8/y8 ,","R","G","54.37 RNSpSEASSGDFLDLK b4/y12 ,",-777.777,"S88",1,"NaN",0,"NaN",0,"RNSpSEASSGDFLDLK","pept98221799",1]
["IPI00302592","Tax_Id=9606 Gene_Symbol=FLNA Isoform 2 of   Filamin-A","APSVANVGSHCDLSLK",1733.7752,2,30,1733.7808,18.9,"1pST",13,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",30,6048,8912,47.4707,"47.47 APpSVANVGSHCDLSLK b3/y14 ,24.75 APSVANVGpSHCDLSLK b9/y8 ,6.44 APSVANVGSHCDLpSLK b14/y3 ,","R","I","47.47 APpSVANVGSHCDLSLK b3/y14 ,",-777.777,"S2144",1,"NaN",0,"NaN",0,"APpSVANVGSHCDLSLK","pept98221695",1]
["IPI00012442","Tax_Id=9606 Gene_Symbol=G3BP1 Ras GTPase-activating       protein-binding protein 1","SSSPAPADIAQTVQEDLR",1963.8824,2,17,1963.8888,0,"1pST",125,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,11332,10551,61.5144,"54.59 pSSSPAPADIAQTVQEDLR b1/y18 ,54.59 SpSSPAPADIAQTVQEDLR b2/y17 ,61.51 SSpSPAPADIAQTVQEDLR b3/y16 ,17.48 SSSPAPADIAQpTVQEDLR b12/y7 ,","K","T","61.51 SSpSPAPADIAQTVQEDLR b3/y16 ,",-777.777,"S232",1,"NaN",0,"NaN",0,"SSpSPAPADIAQTVQEDLR","pept98221723",1]
["IPI00008918","Tax_Id=9606 Gene_Symbol=LIMA1 Isoform Beta of LIM domain       and actin-binding protein 1","ETPHSPGVEDAPIAK",1626.7325,3,29,1626.729,9,"1pST",250,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",29,3325,6205,50.0223,"26.54 EpTPHSPGVEDAPIAK b2/y14 ,50.02 ETPHpSPGVEDAPIAK b5/y11 ,","R","V","50.02 ETPHpSPGVEDAPIAK b5/y11 ,",-777.777,"S490",1,"NaN",0,"NaN",0,"ETPHpSPGVEDAPIAK","pept13887499",1]
["IPI00216049","Tax_Id=9606 Gene_Symbol=HNRNPK Isoform 1 of Heterogeneous       nuclear ribonucleoprotein K","GSYGDLGGPIITTQVTIPK",1995.9835,2,26,1995.9918,11.9,"1pST",28,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",26,11081,10726,53.4453,"53.45 GpSYGDLGGPIITTQVTIPK b2/y18 ,21.14 GSYGDLGGPIIpTTQVTIPK b12/y8 ,13.34 GSYGDLGGPIITpTQVTIPK b13/y7 ,8.22 GSYGDLGGPIITTQVpTIPK b16/y4 ,","R","D","53.45 GpSYGDLGGPIITTQVTIPK b2/y18 ,",-777.777,"S379",1,"NaN",0,"NaN",0,"GpSYGDLGGPIITTQVTIPK","pept98221696",1]
["IPI00165041","Tax_Id=9606 Gene_Symbol=TCOF1 Treacher       Collins-Franceschetti syndrome 1 isoform a","LGAGEGGEASVSPEK",1466.6349,2,42,1466.629,7.3,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",42,2801,7043,38.1248,"38.12 LGAGEGGEApSVSPEK b10/y6 ,31.65 LGAGEGGEASVpSPEK b12/y4 ,","K","T","38.12 LGAGEGGEApSVSPEK b10/y6 ,",-777.777,"S1338",1,"NaN",0,"NaN",0,"LGAGEGGEApSVSPEK","pept98221733",1]
["IPI00008529","Tax_Id=9606 Gene_Symbol=RPLP2 60S acidic ribosomal protein       P2","KEESEESDDDMGFGLFD",2108.6781,2,12,2108.6847,12.4,"2pST",73,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,13174,11447,68.4133,"68.41 KEEpSEEpSDDDMGFGLFD b4/y14 b7/y11 ,","K","-","68.41 KEEpSEEpSDDDMGFGLFD b4/y14 b7/y11 ,",-777.777,"S102;S105",2,"NaN",0,"NaN",0,"KEEpSEEpSDDDMGFGLFD","pept98221718",1]
["IPI00027264","Tax_Id=9606 Gene_Symbol=CALB2 Calretinin","DLEIVLCSEPPM",1481.631,2,18,1481.6183,8,"1pST",400,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",18,9128,5532,62.6598,"62.66 DLEIVLCpSEPPM b8/y5 ,","K","-","62.66 DLEIVLCpSEPPM b8/y5 ,",-777.777,"S267",1,"NaN",0,"NaN",0,"DLEIVLCpSEPPM","pept13887518",1]
["IPI00030968","Tax_Id=9606 Gene_Symbol=C9orf142 Isoform 1 of       Uncharacterized protein C9orf142","LAAAEETAVSPR",1293.6001,2,39,1293.5966,7.2,"1pST",283,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",39,2937,6144,42.4339,"42.43 LAAAEEpTAVSPR b7/y6 ,42.43 LAAAEETAVpSPR b10/y3 ,","R","K","42.43 LAAAEEpTAVSPR b7/y6 ,42.43 LAAAEETAVpSPR b10/y3 ,",-777.777,"S148",1,"T145",1,"NaN",0,"LAAAEE(p)TAV(p)SPR","pept98221756",1]
["IPI00027264","Tax_Id=9606 Gene_Symbol=CALB2 Calretinin","DLEIVLCSEPPM",1481.625,2,10,1481.6183,6.8,"1pST",590,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",10,8250,7124,71.6907,"71.69 DLEIVLCpSEPPM b8/y5 ,","K","-","71.69 DLEIVLCpSEPPM b8/y5 ,",-777.777,"S267",1,"NaN",0,"NaN",0,"DLEIVLCpSEPPM","pept98221856",1]
["IPI00479997","Tax_Id=9606 Gene_Symbol=STMN1 Stathmin","ESVPEFPLSPPK",1405.6462,2,20,1405.653,14.2,"1pST",294,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",20,8836,6703,62.0689,"6.70 EpSVPEFPLSPPK b2/y11 ,62.07 ESVPEFPLpSPPK b9/y4 ,","K","K","62.07 ESVPEFPLpSPPK b9/y4 ,",-777.777,"S38",1,"NaN",0,"NaN",0,"ESVPEFPLpSPPK","pept98221760",1]
["IPI00030131","Tax_Id=9606 Gene_Symbol=TMPO Isoform Beta of       Lamina-associated polypeptide 2, isoforms beta/gamma","GPPDFSSDEEREPTPVLGSGAAAAGR",2649.1609,3,15,2649.1708,2.8,"1pST",312,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",15,6620,13525,67.388,"34.69 GPPDFpSSDEEREPTPVLGSGAAAAGR b6/y21 ,40.39 GPPDFSpSDEEREPTPVLGSGAAAAGR b7/y20 ,67.39 GPPDFSSDEEREPpTPVLGSGAAAAGR b14/y13 ,28.37 GPPDFSSDEEREPTPVLGpSGAAAAGR b19/y8 ,","K","S","67.39 GPPDFSSDEEREPpTPVLGSGAAAAGR b14/y13 ,",-777.777,"NaN",0,"T74",1,"NaN",0,"GPPDFSSDEEREPpTPVLGSGAAAAGR","pept98221765",1]
["IPI00328298","Tax_Id=9606 Gene_Symbol=SMC4 Isoform 2 of Structural       maintenance of chromosomes protein 4","TESPATAAETASEELDNR",1970.8037,2,32,1970.8106,0,"1pST",379,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",32,7641,10595,50.7474,"42.25 pTESPATAAETASEELDNR b1/y18 ,43.73 TEpSPATAAETASEELDNR b3/y16 ,50.75 TESPApTAAETASEELDNR b6/y13 ,32.77 TESPATAAEpTASEELDNR b10/y9 ,22.54 TESPATAAETApSEELDNR b12/y7 ,","R","S","50.75 TESPApTAAETASEELDNR b6/y13 ,",-777.777,"NaN",0,"T44",1,"NaN",0,"TESPApTAAETASEELDNR","pept98221780",1]
["IPI00165041","Tax_Id=9606 Gene_Symbol=TCOF1 Treacher       Collins-Franceschetti syndrome 1 isoform a","LGAGEGGEASVSPEK",1466.631,2,17,1466.629,5.1,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,2666,7038,66.9005,"51.81 LGAGEGGEApSVSPEK b10/y6 ,66.90 LGAGEGGEASVpSPEK b12/y4 ,","K","T","66.90 LGAGEGGEASVpSPEK b12/y4 ,",-777.777,"S1340",1,"NaN",0,"NaN",0,"LGAGEGGEASVpSPEK","pept98221728",1]
["IPI00022145","Tax_Id=9606 Gene_Symbol=NUCKS1 Isoform 1 of Nuclear       ubiquitous casein and cyclin-dependent kinases substrate","EMLMEDVGSEEEQEEEDEAPFQEK",2936.0993,3,22,2936.114,21.8,"1pST",251,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",22,10132,14377,62.2836,"62.28 EMLMEDVGpSEEEQEEEDEAPFQEK b9/y16 ,","R","D","62.28 EMLMEDVGpSEEEQEEEDEAPFQEK b9/y16 ,",-777.777,"S113",1,"NaN",0,"NaN",0,"EMLMEDVGpSEEEQEEEDEAPFQEK","pept98221751",1]
["IPI00018274","Tax_Id=9606 Gene_Symbol=EGFR Isoform 1 of Epidermal growth       factor receptor","ELVEPLTPSGEAPNQALLR",2113.0394,2,11,2113.0456,9.2,"1pST",334,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",11,9491,11482,73.8834,"73.88 ELVEPLpTPSGEAPNQALLR b7/y13 ,73.88 ELVEPLTPpSGEAPNQALLR b9/y11 ,","R","I","73.88 ELVEPLpTPSGEAPNQALLR b7/y13 ,73.88 ELVEPLTPpSGEAPNQALLR b9/y11 ,",-777.777,"S695",1,"T693",1,"NaN",0,"ELVEPL(p)TP(p)SGEAPNQALLR","pept98221775",1]
["IPI00917482","Tax_Id=9606 Gene_Symbol=- cDNA FLJ58118, highly similar to       Leucine-rich repeat-containing G-protein coupled receptor   5","FPLYISPIK",1156.593,2,16,1156.5933,5.1,"1pST",232,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",16,10953,3637,69.0633,"69.06 FPLYIpSPIK b6/y4 ,","R","L","69.06 FPLYIpSPIK b6/y4 ,",-777.777,"S590",1,"NaN",0,"NaN",0,"FPLYIpSPIK","pept14282582",1]
["IPI00302592","Tax_Id=9606 Gene_Symbol=FLNA Isoform 2 of   Filamin-A","APSVANVGSHCDLSLK",1733.7748,2,38,1733.7808,30.8,"1pST",13,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",38,6043,8909,47.1397,"47.14 APpSVANVGSHCDLSLK b3/y14 ,29.35 APSVANVGpSHCDLSLK b9/y8 ,18.24 APSVANVGSHCDLpSLK b14/y3 ,","R","I","47.14 APpSVANVGSHCDLSLK b3/y14 ,",-777.777,"S2144",1,"NaN",0,"NaN",0,"APpSVANVGSHCDLSLK","pept98221692",1]
["IPI00220113","Tax_Id=9606 Gene_Symbol=MAP4 Isoform 2 of       Microtubule-associated protein 4","DMSPLSETEMALGK",1587.6505,2,12,1587.6561,7.5,"1pST",241,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,10552,7741,73.522,"73.52 DMpSPLSETEMALGK b3/y12 ,51.10 DMSPLpSETEMALGK b6/y9 ,37.02 DMSPLSEpTEMALGK b8/y7 ,","K","D","73.52 DMpSPLSETEMALGK b3/y12 ,",-777.777,"S507",1,"NaN",0,"NaN",0,"DMpSPLSETEMALGK","pept98221746",1]
["IPI00027264","Tax_Id=9606 Gene_Symbol=CALB2 Calretinin","DLEIVLCSEPPM",1481.6258,2,14,1481.6183,4.9,"1pST",590,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",14,8256,7125,71.6907,"71.69 DLEIVLCpSEPPM b8/y5 ,","K","-","71.69 DLEIVLCpSEPPM b8/y5 ,",-777.777,"S267",1,"NaN",0,"NaN",0,"DLEIVLCpSEPPM","pept98221857",1]
["IPI00216049","Tax_Id=9606 Gene_Symbol=HNRNPK Isoform 1 of Heterogeneous       nuclear ribonucleoprotein K","IILDLISESPIK",1419.7572,2,27,1419.7626,8.9,"1pST",28,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",27,12277,6782,58.9542,"51.59 IILDLIpSESPIK b7/y6 ,58.95 IILDLISEpSPIK b9/y4 ,","K","G","58.95 IILDLISEpSPIK b9/y4 ,",-777.777,"S216",1,"NaN",0,"NaN",0,"IILDLISEpSPIK","pept98221701",1]
["IPI00165041","Tax_Id=9606 Gene_Symbol=TCOF1 Treacher       Collins-Franceschetti syndrome 1 isoform a","LGAGEGGEASVSPEK",1466.6305,2,20,1466.629,7.3,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",20,2792,7036,66.0424,"43.83 LGAGEGGEApSVSPEK b10/y6 ,66.04 LGAGEGGEASVpSPEK b12/y4 ,","K","T","66.04 LGAGEGGEASVpSPEK b12/y4 ,",-777.777,"S1340",1,"NaN",0,"NaN",0,"LGAGEGGEASVpSPEK","pept98221730",1]
["IPI00328298","Tax_Id=9606 Gene_Symbol=SMC4 Isoform 2 of Structural       maintenance of chromosomes protein 4","TESPATAAETASEELDNR",1970.8003,2,30,1970.8106,5.4,"1pST",379,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",30,7649,10593,56.4054,"32.64 pTESPATAAETASEELDNR b1/y18 ,39.28 TEpSPATAAETASEELDNR b3/y16 ,56.41 TESPApTAAETASEELDNR b6/y13 ,28.34 TESPATAAEpTASEELDNR b10/y9 ,17.32 TESPATAAETApSEELDNR b12/y7 ,","R","S","56.41 TESPApTAAETASEELDNR b6/y13 ,",-777.777,"NaN",0,"T44",1,"NaN",0,"TESPApTAAETASEELDNR","pept98221781",1]
["IPI00027264","Tax_Id=9606 Gene_Symbol=CALB2 Calretinin","DLEIVLCSEPPM",1481.6295,2,15,1481.6183,7.9,"1pST",400,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",15,8920,5531,71.6907,"71.69 DLEIVLCpSEPPM b8/y5 ,","K","-","71.69 DLEIVLCpSEPPM b8/y5 ,",-777.777,"S267",1,"NaN",0,"NaN",0,"DLEIVLCpSEPPM","pept13887515",1]
["IPI00410287","Tax_Id=9606 Gene_Symbol=PRKAA1 protein kinase,       AMP-activated, alpha 1 catalytic subunit isoform 2","MSLQLYQVDSR",1434.6312,2,16,1434.6214,15.6,"1oxM 1pY",453,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",16,5589,5317,71.1521,"71.15 MoxSLQLpYQVDSR b1/y11 b6/y6 ,","K","T","71.15 MoxSLQLpYQVDSR b1/y11 b6/y6 ,",-777.777,"NaN",0,"NaN",0,"Y478",1,"MSLQLpYQVDSR","pept13887556",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","DLFDYSPPLHK",1410.6196,2,29,1410.6221,18.1,"1pST",67,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",29,8610,4898,58.7267,"58.73 DLFDYpSPPLHK b6/y6 ,","K","N","58.73 DLFDYpSPPLHK b6/y6 ,",-777.777,"S512",1,"NaN",0,"NaN",0,"DLFDYpSPPLHK","pept14811317",1]
["IPI00023177","Tax_Id=9606 Gene_Symbol=CHAF1A chromatin assembly factor 1,       subunit A","SPSTTYLHTPTPSEDAAIPSK",2279.0332,3,43,2279.0359,0,"1pST",210,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",43,6873,9172,44.9831,"44.03 pSPSTTYLHTPTPSEDAAIPSK b1/y21 ,44.98 SPpSTTYLHTPTPSEDAAIPSK b3/y19 ,39.50 SPSpTTYLHTPTPSEDAAIPSK b4/y18 ,39.50 SPSTpTYLHTPTPSEDAAIPSK b5/y17 ,29.39 SPSTTYLHpTPTPSEDAAIPSK b9/y13 ,10.16 SPSTTYLHTPpTPSEDAAIPSK b11/y11 ,7.01 SPSTTYLHTPTPpSEDAAIPSK b13/y9 ,8.30 SPSTTYLHTPTPSEDAAIPpSK b20/y2 ,","R","S","44.98 SPpSTTYLHTPTPSEDAAIPSK b3/y19 ,",-777.777,"S775;S777",2,"NaN",0,"NaN",0,"(p)SP(p)STTYLHTPTPSEDAAIPSK","pept13887496",1]
["IPI00479997","Tax_Id=9606 Gene_Symbol=STMN1 Stathmin","ASGQAFELILSPR",1467.707,2,25,1467.7123,15,"1pST",294,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",25,10526,7050,64.7194,"12.27 ApSGQAFELILSPR b2/y12 ,64.72 ASGQAFELILpSPR b11/y3 ,","R","S","64.72 ASGQAFELILpSPR b11/y3 ,",-777.777,"S25",1,"NaN",0,"NaN",0,"ASGQAFELILpSPR","pept98221761",1]
["IPI00023780","Tax_Id=9606 Gene_Symbol=DNAJC5 Isoform 2 of DnaJ homolog       subfamily C member 5","SLSTSGESLYHVLGLDK",1884.8835,2,28,1884.887,1.7,"1pST",418,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",28,12925,9991,62.0019,"45.92 pSLSTSGESLYHVLGLDK b1/y17 ,62.00 SLpSTSGESLYHVLGLDK b3/y15 ,47.77 SLSpTSGESLYHVLGLDK b4/y14 ,47.77 SLSTpSGESLYHVLGLDK b5/y13 ,34.94 SLSTSGEpSLYHVLGLDK b8/y10 ,","R","N","62.00 SLpSTSGESLYHVLGLDK b3/y15 ,",-777.777,"S10",1,"NaN",0,"NaN",0,"SLpSTSGESLYHVLGLDK","pept98221788",1]
["IPI00014575","Tax_Id=9606 Gene_Symbol=CDC6 Cell division control protein       6 homolog","LVLNTAVPDRLPAR",1613.8729,2,19,1613.8654,19.2,"1pST",393,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",19,12778,6117,71.4749,"71.47 LVLNpTAVPDRLPAR b5/y10 ,","K","E","71.47 LVLNpTAVPDRLPAR b5/y10 ,",-777.777,"NaN",0,"T166",1,"NaN",0,"LVLNpTAVPDRLPAR","pept13887513",1]
["IPI00011118","Tax_Id=9606 Gene_Symbol=RRM2 Ribonucleoside-diphosphate       reductase subunit M2","VPLAPITDPQQLQLSPLK",2037.0851,2,29,2037.0911,20.3,"1pST",333,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",29,12015,11013,61.5144,"21.14 VPLAPIpTDPQQLQLSPLK b7/y12 ,61.51 VPLAPITDPQQLQLpSPLK b15/y4 ,","R","G","61.51 VPLAPITDPQQLQLpSPLK b15/y4 ,",-777.777,"S80",1,"NaN",0,"NaN",0,"VPLAPITDPQQLQLpSPLK","pept98221772",1]
["IPI00185919","Tax_Id=9606 Gene_Symbol=LARP1 Isoform 1 of La-related       protein 1","GLSASLPDLDSENWIEVK",2051.9337,2,17,2051.9452,0,"1pST",509,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,13451,11100,73.8834,"72.36 GLpSASLPDLDSENWIEVK b3/y16 ,73.88 GLSApSLPDLDSENWIEVK b5/y14 ,18.66 GLSASLPDLDpSENWIEVK b11/y8 ,","K","K","73.88 GLSApSLPDLDSENWIEVK b5/y14 ,",-777.777,"S546;S548",2,"NaN",0,"NaN",0,"GL(p)SA(p)SLPDLDSENWIEVK","pept98221811",1]
["IPI00220740","Tax_Id=9606 Gene_Symbol=NPM1 Isoform 2 of     Nucleophosmin","DELHIVEAEAMNYEGSPIK",2223.981,3,32,2223.9759,22.9,"1pST",319,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",32,10950,8943,59.589,"59.59 DELHIVEAEAMNYEGpSPIK b16/y4 ,","K","V","59.59 DELHIVEAEAMNYEGpSPIK b16/y4 ,",-777.777,"S70",1,"NaN",0,"NaN",0,"DELHIVEAEAMNYEGpSPIK","pept13887506",1]
["IPI00102752","Tax_Id=9606 Gene_Symbol=RBM15 Isoform 1 of Putative       RNA-binding protein 15","LLLERPSPIR",1272.6974,2,26,1272.6955,26.1,"1pST",166,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",26,6993,3981,66.4946,"66.49 LLLERPpSPIR b7/y4 ,","R","D","66.49 LLLERPpSPIR b7/y4 ,",-777.777,"S700",1,"NaN",0,"NaN",0,"LLLERPpSPIR","pept14282567",1]
["IPI00150057","Tax_Id=9606 Gene_Symbol=SMARCC2 Isoform 2 of SWI/SNF       complex subunit SMARCC2","DMDEPSPVPNVEEVTLPK",2074.9105,2,22,2074.917,20.3,"1pST",367,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",22,9591,11264,70.8863,"70.89 DMDEPpSPVPNVEEVTLPK b6/y13 ,21.41 DMDEPSPVPNVEEVpTLPK b15/y4 ,","K","T","70.89 DMDEPpSPVPNVEEVTLPK b6/y13 ,",-777.777,"S347",1,"NaN",0,"NaN",0,"DMDEPpSPVPNVEEVTLPK","pept98221777",1]
["IPI00022145","Tax_Id=9606 Gene_Symbol=NUCKS1 Isoform 1 of Nuclear       ubiquitous casein and cyclin-dependent kinases substrate","VVDYSQFQESDDADEDYGR",2316.8614,2,32,2316.8696,11.5,"1pST",251,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",32,5954,12448,61.5835,"47.47 VVDYpSQFQESDDADEDYGR b5/y15 ,61.58 VVDYSQFQEpSDDADEDYGR b10/y10 ,","K","D","61.58 VVDYSQFQEpSDDADEDYGR b10/y10 ,",-777.777,"S19",1,"NaN",0,"NaN",0,"VVDYSQFQEpSDDADEDYGR","pept98221750",1]
["IPI00170778","Tax_Id=9606 Gene_Symbol=FNBP4 Formin-binding protein     4","RPILQLSPPGPR",1409.7512,3,32,1409.7544,18,"1pST",60,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",32,6503,3546,61.588,"61.59 RPILQLpSPPGPR b7/y6 ,","R","G","61.59 RPILQLpSPPGPR b7/y6 ,",-777.777,"S18",1,"NaN",0,"NaN",0,"RPILQLpSPPGPR","pept14422629",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","YSPSQNSPIHHIPSR",1798.8284,3,31,1798.8152,11.6,"1pST",69,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",31,3948,4548,62.7784,"54.37 YpSPSQNSPIHHIPSR b2/y14 ,62.78 YSPpSQNSPIHHIPSR b4/y12 ,56.52 YSPSQNpSPIHHIPSR b7/y9 ,13.84 YSPSQNSPIHHIPpSR b14/y2 ,","R","R","62.78 YSPpSQNSPIHHIPSR b4/y12 ,",-777.777,"S287",1,"NaN",0,"NaN",0,"YSPpSQNSPIHHIPSR","pept14422630",1]
["IPI00165041","Tax_Id=9606 Gene_Symbol=TCOF1 Treacher       Collins-Franceschetti syndrome 1 isoform a","LGAGEGGEASVSPEK",1466.623,2,34,1466.629,4.3,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",34,2928,7034,60.3978,"52.53 LGAGEGGEApSVSPEK b10/y6 ,60.40 LGAGEGGEASVpSPEK b12/y4 ,","K","T","60.40 LGAGEGGEASVpSPEK b12/y4 ,",-777.777,"S1340",1,"NaN",0,"NaN",0,"LGAGEGGEASVpSPEK","pept98221736",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","YSPSQNSPIHHIPSR",1798.8156,3,33,1798.8152,7.2,"1pST",37,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1000.raw",33,4590,3976,62.2836,"62.28 YpSPSQNSPIHHIPSR b2/y14 ,50.44 YSPpSQNSPIHHIPSR b4/y12 ,50.44 YSPSQNpSPIHHIPSR b7/y9 ,6.79 YSPSQNSPIHHIPpSR b14/y2 ,","R","R","62.28 YpSPSQNSPIHHIPSR b2/y14 ,",-777.777,"S285",1,"NaN",0,"NaN",0,"YpSPSQNSPIHHIPSR","pept14555344",1]
["IPI00023780","Tax_Id=9606 Gene_Symbol=DNAJC5 Isoform 2 of DnaJ homolog       subfamily C member 5","SLSTSGESLYHVLGLDK",1884.8801,2,13,1884.887,1.4,"1pST",418,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,12933,9988,82.2864,"73.13 pSLSTSGESLYHVLGLDK b1/y17 ,82.29 SLpSTSGESLYHVLGLDK b3/y15 ,66.75 SLSpTSGESLYHVLGLDK b4/y14 ,59.76 SLSTpSGESLYHVLGLDK b5/y13 ,39.25 SLSTSGEpSLYHVLGLDK b8/y10 ,","R","N","82.29 SLpSTSGESLYHVLGLDK b3/y15 ,",-777.777,"S10",1,"NaN",0,"NaN",0,"SLpSTSGESLYHVLGLDK","pept98221789",1]
["IPI00396171","Tax_Id=9606 Gene_Symbol=MAP4 Isoform 1 of       Microtubule-associated protein 4","DMESPTKLDVTLAK",1626.751,2,15,1626.7576,5.6,"1pST",32,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",15,7623,6208,81.1562,"81.16 DMEpSPTKLDVTLAK b4/y11 ,46.00 DMESPpTKLDVTLAK b6/y9 ,18.27 DMESPTKLDVpTLAK b11/y4 ,","K","D","81.16 DMEpSPTKLDVTLAK b4/y11 ,",-777.777,"S280",1,"NaN",0,"NaN",0,"DMEpSPTKLDVTLAK","pept13887490",1]
["IPI00411937","Tax_Id=9606 Gene_Symbol=NOP56 Nucleolar protein   5A","EELMSSDLEETAGSTSIPK",2102.8905,2,45,2102.8966,10.5,"1pST",274,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",45,8634,11413,51.7882,"45.47 EELMpSSDLEETAGSTSIPK b5/y15 ,51.79 EELMSpSDLEETAGSTSIPK b6/y14 ,24.22 EELMSSDLEEpTAGSTSIPK b11/y9 ,9.69 EELMSSDLEETAGpSTSIPK b14/y6 ,7.93 EELMSSDLEETAGSpTSIPK b15/y5 ,7.93 EELMSSDLEETAGSTpSIPK b16/y4 ,","K","R","51.79 EELMSpSDLEETAGSTSIPK b6/y14 ,",-777.777,"S520",1,"NaN",0,"NaN",0,"EELMSpSDLEETAGSTSIPK","pept98221752",1]
["IPI00015029","Tax_Id=9606 Gene_Symbol=PTGES3 Prostaglandin E synthase       3","DWEDDSDEDMSNFDR",1954.6148,2,22,1954.62,20.7,"1pST",190,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",22,7151,10473,76.35,"76.35 DWEDDpSDEDMSNFDR b6/y10 ,36.48 DWEDDSDEDMpSNFDR b11/y5 ,","K","F","76.35 DWEDDpSDEDMSNFDR b6/y10 ,",-777.777,"S113",1,"NaN",0,"NaN",0,"DWEDDpSDEDMSNFDR","pept98221738",1]
["IPI00917482","Tax_Id=9606 Gene_Symbol=- cDNA FLJ58118, highly similar to       Leucine-rich repeat-containing G-protein coupled receptor   5","FPLYISPIK",1156.5929,2,19,1156.5933,3.1,"1pST",232,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_25.raw",19,10928,3636,79.5075,"79.51 FPLYIpSPIK b6/y4 ,","R","L","79.51 FPLYIpSPIK b6/y4 ,",-777.777,"S590",1,"NaN",0,"NaN",0,"FPLYIpSPIK","pept14282581",1]
["IPI00410287","Tax_Id=9606 Gene_Symbol=PRKAA1 protein kinase,       AMP-activated, alpha 1 catalytic subunit isoform 2","MSLQLYQVDSR",1434.6332,2,15,1434.6214,13,"1oxM 1pY",453,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",15,5584,5319,83.8148,"83.81 MoxSLQLpYQVDSR b1/y11 b6/y6 ,","K","T","83.81 MoxSLQLpYQVDSR b1/y11 b6/y6 ,",-777.777,"NaN",0,"NaN",0,"Y478",1,"MSLQLpYQVDSR","pept13887555",1]
["IPI00029795","Tax_Id=9606 Gene_Symbol=NFIC Isoform 4 of Nuclear factor 1       C-type","NWTEDMEGGISSPVK",1728.6992,2,29,1728.7066,7.6,"1pST",405,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",29,7567,8813,70.7099,"20.84 NWpTEDMEGGISSPVK b3/y13 ,48.63 NWTEDMEGGIpSSPVK b11/y5 ,70.71 NWTEDMEGGISpSPVK b12/y4 ,","R","K","70.71 NWTEDMEGGISpSPVK b12/y4 ,",-777.777,"S323",1,"NaN",0,"NaN",0,"NWTEDMEGGISpSPVK","pept98221787",1]
["IPI00023048","Tax_Id=9606 Gene_Symbol=EEF1D Elongation factor     1-delta","KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR",3656.5135,3,24,3656.5163,17.2,"1pST",225,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",24,8741,15090,76.4236,"19.69 KPApTPAEDDEDDDIDLFGSDNEEEDKEAAQLR b4/y29 ,76.42 KPATPAEDDEDDDIDLFGpSDNEEEDKEAAQLR b19/y14 ,","K","E","76.42 KPATPAEDDEDDDIDLFGpSDNEEEDKEAAQLR b19/y14 ,",-777.777,"S162",1,"NaN",0,"NaN",0,"KPATPAEDDEDDDIDLFGpSDNEEEDKEAAQLR","pept98221742",1]
["IPI00165041","Tax_Id=9606 Gene_Symbol=TCOF1 Treacher       Collins-Franceschetti syndrome 1 isoform a","LGAGEGGEASVSPEK",1466.6319,2,41,1466.629,7.2,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",41,2912,7041,59.589,"52.53 LGAGEGGEApSVSPEK b10/y6 ,59.59 LGAGEGGEASVpSPEK b12/y4 ,","K","T","59.59 LGAGEGGEASVpSPEK b12/y4 ,",-777.777,"S1340",1,"NaN",0,"NaN",0,"LGAGEGGEASVpSPEK","pept98221735",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","SSATSGDIWPGLSAYDNSPR",2159.9112,2,13,2159.9161,5.3,"1pST",49,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",13,10153,11747,88.0458,"9.38 pSSATSGDIWPGLSAYDNSPR b1/y20 ,9.38 SpSATSGDIWPGLSAYDNSPR b2/y19 ,9.49 SSApTSGDIWPGLSAYDNSPR b4/y17 ,9.59 SSATpSGDIWPGLSAYDNSPR b5/y16 ,50.44 SSATSGDIWPGLpSAYDNSPR b13/y8 ,88.05 SSATSGDIWPGLSAYDNpSPR b18/y3 ,","K","S","88.05 SSATSGDIWPGLSAYDNpSPR b18/y3 ,",-777.777,"S222",1,"NaN",0,"NaN",0,"SSATSGDIWPGLSAYDNpSPR","pept98221709",1]
["IPI00216049","Tax_Id=9606 Gene_Symbol=HNRNPK Isoform 1 of Heterogeneous       nuclear ribonucleoprotein K","GSYGDLGGPIITTQVTIPK",1995.9833,2,53,1995.9918,38.5,"1pST",28,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",53,11099,10725,48.5366,"48.54 GpSYGDLGGPIITTQVTIPK b2/y18 ,8.68 GSYGDLGGPIIpTTQVTIPK b12/y8 ,8.68 GSYGDLGGPIITpTQVTIPK b13/y7 ,7.09 GSYGDLGGPIITTQVpTIPK b16/y4 ,","R","D","48.54 GpSYGDLGGPIITTQVTIPK b2/y18 ,",-777.777,"S379",1,"NaN",0,"NaN",0,"GpSYGDLGGPIITTQVTIPK","pept98221699",1]
["IPI00021417","Tax_Id=9606 Gene_Symbol=SART1 U4/U6.U5 tri-snRNP-associated       protein 1","RVSEVEEEKEPVPQPLPSDDTR",2615.2018,3,19,2615.2116,17.5,"1pST",151,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",19,4990,9441,83.4173,"83.42 RVpSEVEEEKEPVPQPLPSDDTR b3/y20 ,7.03 RVSEVEEEKEPVPQPLPpSDDTR b18/y5 ,8.94 RVSEVEEEKEPVPQPLPSDDpTR b21/y2 ,","R","V","83.42 RVpSEVEEEKEPVPQPLPSDDTR b3/y20 ,",-777.777,"S448",1,"NaN",0,"NaN",0,"RVpSEVEEEKEPVPQPLPSDDTR","pept14811328",1]
["IPI00220740","Tax_Id=9606 Gene_Symbol=NPM1 Isoform 2 of     Nucleophosmin","DELHIVEAEAMNYEGSPIK",2223.9741,3,36,2223.9759,16,"1pST",11,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",36,10027,8311,66.9005,"66.90 DELHIVEAEAMNYEGpSPIK b16/y4 ,","K","V","66.90 DELHIVEAEAMNYEGpSPIK b16/y4 ,",-777.777,"S70",1,"NaN",0,"NaN",0,"DELHIVEAEAMNYEGpSPIK","pept14811315",1]
["IPI00302592","Tax_Id=9606 Gene_Symbol=FLNA Isoform 2 of   Filamin-A","APSVANVGSHCDLSLK",1733.7752,2,51,1733.7808,43.8,"1pST",13,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",51,6047,8911,54.3728,"54.37 APpSVANVGSHCDLSLK b3/y14 ,24.15 APSVANVGpSHCDLSLK b9/y8 ,14.26 APSVANVGSHCDLpSLK b14/y3 ,","R","I","54.37 APpSVANVGSHCDLSLK b3/y14 ,",-777.777,"S2144",1,"NaN",0,"NaN",0,"APpSVANVGSHCDLSLK","pept98221694",1]
["IPI00012340","Tax_Id=9606 Gene_Symbol=SFRS9 Splicing factor,       arginine/serine-rich 9","GSPHYFSPFRPY",1613.6054,2,17,1613.6105,1.5,"2pST",566,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,10225,7864,88.9837,"88.98 GpSPHYFpSPFRPY b2/y11 b7/y6 ,","R","-","88.98 GpSPHYFpSPFRPY b2/y11 b7/y6 ,",-777.777,"S211;S216",2,"NaN",0,"NaN",0,"GpSPHYFpSPFRPY","pept98221843",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","DLFDYSPPLHK",1410.6196,2,14,1410.6221,11.3,"1pST",67,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",14,8609,4897,93.4444,"93.44 DLFDYpSPPLHK b6/y6 ,","K","N","93.44 DLFDYpSPPLHK b6/y6 ,",-777.777,"S512",1,"NaN",0,"NaN",0,"DLFDYpSPPLHK","pept14811316",1]
["IPI00023780","Tax_Id=9606 Gene_Symbol=DNAJC5 Isoform 2 of DnaJ homolog       subfamily C member 5","SLSTSGESLYHVLGLDK",1884.8801,2,25,1884.887,1.7,"1pST",418,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",25,12934,9989,83.2088,"72.31 pSLSTSGESLYHVLGLDK b1/y17 ,83.21 SLpSTSGESLYHVLGLDK b3/y15 ,59.76 SLSpTSGESLYHVLGLDK b4/y14 ,59.76 SLSTpSGESLYHVLGLDK b5/y13 ,59.76 SLSTSGEpSLYHVLGLDK b8/y10 ,","R","N","83.21 SLpSTSGESLYHVLGLDK b3/y15 ,",-777.777,"S10",1,"NaN",0,"NaN",0,"SLpSTSGESLYHVLGLDK","pept98221790",1]
["IPI00410287","Tax_Id=9606 Gene_Symbol=PRKAA1 protein kinase,       AMP-activated, alpha 1 catalytic subunit isoform 2","MSLQLYQVDSR",1434.6319,2,17,1434.6214,12.8,"1oxM 1pY",551,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",17,5749,6857,92.1054,"92.11 MoxSLQLpYQVDSR b1/y11 b6/y6 ,","K","T","92.11 MoxSLQLpYQVDSR b1/y11 b6/y6 ,",-777.777,"NaN",0,"NaN",0,"Y478",1,"MSLQLpYQVDSR","pept98221828",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","DLFDYSPPLHK",1410.6194,2,28,1410.6221,22.9,"1pST",67,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",28,8618,4896,82.805,"82.80 DLFDYpSPPLHK b6/y6 ,","K","N","82.80 DLFDYpSPPLHK b6/y6 ,",-777.777,"S512",1,"NaN",0,"NaN",0,"DLFDYpSPPLHK","pept14811318",1]
["IPI00008529","Tax_Id=9606 Gene_Symbol=RPLP2 60S acidic ribosomal protein       P2","KEESEESDDDMGFGLFD",2028.7109,2,29,2028.7184,10.2,"1pST",73,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",29,12050,10962,82.2864,"73.13 KEEpSEESDDDMGFGLFD b4/y14 ,82.29 KEESEEpSDDDMGFGLFD b7/y11 ,","K","-","82.29 KEESEEpSDDDMGFGLFD b7/y11 ,",-777.777,"S105",1,"NaN",0,"NaN",0,"KEESEEpSDDDMGFGLFD","pept98221715",1]
["IPI00007764","Tax_Id=9606 Gene_Symbol=HN1 Isoform 1 of Hematological and       neurological expressed 1 protein","RNSSEASSGDFLDLK",1704.7309,2,51,1704.7356,8.2,"1pST",116,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",51,7041,6139,61.2401,"61.24 RNpSSEASSGDFLDLK b3/y13 ,61.24 RNSpSEASSGDFLDLK b4/y12 ,46.53 RNSSEApSSGDFLDLK b7/y9 ,46.53 RNSSEASpSGDFLDLK b8/y8 ,","R","G","61.24 RNpSSEASSGDFLDLK b3/y13 ,61.24 RNSpSEASSGDFLDLK b4/y12 ,",-777.777,"S87;S88",2,"NaN",0,"NaN",0,"RN(p)S(p)SEASSGDFLDLK","pept14811327",1]
["IPI00396171","Tax_Id=9606 Gene_Symbol=MAP4 Isoform 1 of       Microtubule-associated protein 4","DMESPTKLDVTLAK",1626.7583,2,19,1626.7576,6.1,"1pST",32,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",19,7603,6212,94.5855,"94.59 DMEpSPTKLDVTLAK b4/y11 ,51.81 DMESPpTKLDVTLAK b6/y9 ,19.71 DMESPTKLDVpTLAK b11/y4 ,","K","D","94.59 DMEpSPTKLDVTLAK b4/y11 ,",-777.777,"S280",1,"NaN",0,"NaN",0,"DMEpSPTKLDVTLAK","pept13887487",1]
["IPI00411937","Tax_Id=9606 Gene_Symbol=NOP56 Nucleolar protein   5A","EELMSSDLEETAGSTSIPK",2102.8878,2,48,2102.8966,8,"1pST",274,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",48,8658,11410,66.0594,"59.04 EELMpSSDLEETAGSTSIPK b5/y15 ,66.06 EELMSpSDLEETAGSTSIPK b6/y14 ,34.69 EELMSSDLEEpTAGSTSIPK b11/y9 ,19.39 EELMSSDLEETAGpSTSIPK b14/y6 ,15.63 EELMSSDLEETAGSpTSIPK b15/y5 ,12.44 EELMSSDLEETAGSTpSIPK b16/y4 ,","K","R","66.06 EELMSpSDLEETAGSTSIPK b6/y14 ,",-777.777,"S520",1,"NaN",0,"NaN",0,"EELMSpSDLEETAGSTSIPK","pept98221754",1]
["IPI00165041","Tax_Id=9606 Gene_Symbol=TCOF1 Treacher       Collins-Franceschetti syndrome 1 isoform a","LGAGEGGEASVSPEK",1466.623,2,47,1466.629,17.4,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",47,2929,7035,68.6715,"45.75 LGAGEGGEApSVSPEK b10/y6 ,68.67 LGAGEGGEASVpSPEK b12/y4 ,","K","T","68.67 LGAGEGGEASVpSPEK b12/y4 ,",-777.777,"S1340",1,"NaN",0,"NaN",0,"LGAGEGGEASVpSPEK","pept98221737",1]
["IPI00021812","Tax_Id=9606 Gene_Symbol=AHNAK Neuroblast       differentiation-associated protein AHNAK","ISMSEVDLNVAAPK",1552.7131,2,42,1552.7208,0,"1pST",1,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",42,9076,7539,75.5199,"64.72 IpSMSEVDLNVAAPK b2/y13 ,75.52 ISMpSEVDLNVAAPK b4/y11 ,","R","V","75.52 ISMpSEVDLNVAAPK b4/y11 ,",-777.777,"S572",1,"NaN",0,"NaN",0,"ISMpSEVDLNVAAPK","pept98221690",1]
["IPI00007764","Tax_Id=9606 Gene_Symbol=HN1 Isoform 1 of Hematological and       neurological expressed 1 protein","RNSSEASSGDFLDLK",1704.7389,2,43,1704.7356,8.8,"1pST",116,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",43,7031,6143,74.8107,"51.70 RNpSSEASSGDFLDLK b3/y13 ,74.81 RNSpSEASSGDFLDLK b4/y12 ,59.76 RNSSEApSSGDFLDLK b7/y9 ,67.54 RNSSEASpSGDFLDLK b8/y8 ,","R","G","74.81 RNSpSEASSGDFLDLK b4/y12 ,",-777.777,"S88",1,"NaN",0,"NaN",0,"RNSpSEASSGDFLDLK","pept14811325",1]
["IPI00220740","Tax_Id=9606 Gene_Symbol=NPM1 Isoform 2 of     Nucleophosmin","DELHIVEAEAMNYEGSPIK",2223.9697,3,33,2223.9759,24.4,"1pST",319,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",33,11120,8941,84.8504,"84.85 DELHIVEAEAMNYEGpSPIK b16/y4 ,","K","V","84.85 DELHIVEAEAMNYEGpSPIK b16/y4 ,",-777.777,"S70",1,"NaN",0,"NaN",0,"DELHIVEAEAMNYEGpSPIK","pept13887508",1]
["IPI00165041","Tax_Id=9606 Gene_Symbol=TCOF1 Treacher       Collins-Franceschetti syndrome 1 isoform a","LGAGEGGEASVSPEK",1466.6319,2,28,1466.629,10.2,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",28,2911,7040,91.2361,"83.21 LGAGEGGEApSVSPEK b10/y6 ,91.24 LGAGEGGEASVpSPEK b12/y4 ,","K","T","91.24 LGAGEGGEASVpSPEK b12/y4 ,",-777.777,"S1340",1,"NaN",0,"NaN",0,"LGAGEGGEASVpSPEK","pept98221734",1]
["IPI00012199","Tax_Id=9606 Gene_Symbol=CCDC86 Coiled-coil       domain-containing protein 86","LGGLRPESPESLTSVSR",1863.9161,2,28,1863.9091,11.8,"1pST",214,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",28,6602,6859,91.9293,"91.93 LGGLRPEpSPESLTSVSR b8/y10 ,59.04 LGGLRPESPEpSLTSVSR b11/y7 ,37.72 LGGLRPESPESLpTSVSR b13/y5 ,37.72 LGGLRPESPESLTpSVSR b14/y4 ,25.09 LGGLRPESPESLTSVpSR b16/y2 ,","R","T","91.93 LGGLRPEpSPESLTSVSR b8/y10 ,",-777.777,"S18",1,"NaN",0,"NaN",0,"LGGLRPEpSPESLTSVSR","pept14811335",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","SSATSGDIWPGLSAYDNSPR",2159.9105,2,31,2159.9161,7.9,"1pST",49,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",31,10110,11746,90.1143,"14.01 pSSATSGDIWPGLSAYDNSPR b1/y20 ,14.01 SpSATSGDIWPGLSAYDNSPR b2/y19 ,11.07 SSApTSGDIWPGLSAYDNSPR b4/y17 ,14.19 SSATpSGDIWPGLSAYDNSPR b5/y16 ,45.28 SSATSGDIWPGLpSAYDNSPR b13/y8 ,90.11 SSATSGDIWPGLSAYDNpSPR b18/y3 ,","K","S","90.11 SSATSGDIWPGLSAYDNpSPR b18/y3 ,",-777.777,"S222",1,"NaN",0,"NaN",0,"SSATSGDIWPGLSAYDNpSPR","pept98221708",1]
["IPI00220113","Tax_Id=9606 Gene_Symbol=MAP4 Isoform 2 of       Microtubule-associated protein 4","DVTPPPETEVVLIK",1615.8044,2,39,1615.811,27.3,"1pST",241,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",39,8963,7886,82.2052,"82.21 DVpTPPPETEVVLIK b3/y12 ,37.02 DVTPPPEpTEVVLIK b8/y7 ,","K","N","82.21 DVpTPPPETEVVLIK b3/y12 ,",-777.777,"NaN",0,"T521",1,"NaN",0,"DVpTPPPETEVVLIK","pept98221745",1]
["IPI00165041","Tax_Id=9606 Gene_Symbol=TCOF1 Treacher       Collins-Franceschetti syndrome 1 isoform a","LGAGEGGEASVSPEK",1466.631,2,47,1466.629,17.5,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",47,2667,7039,76.35,"52.53 LGAGEGGEApSVSPEK b10/y6 ,76.35 LGAGEGGEASVpSPEK b12/y4 ,","K","T","76.35 LGAGEGGEASVpSPEK b12/y4 ,",-777.777,"S1340",1,"NaN",0,"NaN",0,"LGAGEGGEASVpSPEK","pept98221729",1]
["IPI00410287","Tax_Id=9606 Gene_Symbol=PRKAA1 protein kinase,       AMP-activated, alpha 1 catalytic subunit isoform 2","MSLQLYQVDSR",1434.6335,2,12,1434.6214,7.1,"1oxM 1pY",551,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",12,5744,6859,111.419,"111.42 MoxSLQLpYQVDSR b1/y11 b6/y6 ,","K","T","111.42 MoxSLQLpYQVDSR b1/y11 b6/y6 ,",-777.777,"NaN",0,"NaN",0,"Y478",1,"MSLQLpYQVDSR","pept98221827",1]
["IPI00006079","Tax_Id=9606 Gene_Symbol=BCLAF1 Isoform 1 of       Bcl-2-associated transcription factor 1","DLFDYSPPLHK",1410.6167,2,23,1410.6221,15.2,"1pST",49,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",23,8571,6721,102.85,"102.85 DLFDYpSPPLHK b6/y6 ,","K","N","102.85 DLFDYpSPPLHK b6/y6 ,",-777.777,"S512",1,"NaN",0,"NaN",0,"DLFDYpSPPLHK","pept98221707",1]
["IPI00150057","Tax_Id=9606 Gene_Symbol=SMARCC2 Isoform 2 of SWI/SNF       complex subunit SMARCC2","DMDEPSPVPNVEEVTLPK",2074.9098,2,33,2074.917,32.6,"1pST",367,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",33,9606,11263,93.1363,"93.14 DMDEPpSPVPNVEEVTLPK b6/y13 ,30.83 DMDEPSPVPNVEEVpTLPK b15/y4 ,","K","T","93.14 DMDEPpSPVPNVEEVTLPK b6/y13 ,",-777.777,"S347",1,"NaN",0,"NaN",0,"DMDEPpSPVPNVEEVTLPK","pept98221778",1]
["IPI00396171","Tax_Id=9606 Gene_Symbol=MAP4 Isoform 1 of       Microtubule-associated protein 4","DMESPTKLDVTLAK",1626.7583,2,40,1626.7576,10.3,"1pST",32,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",40,7604,6213,88.5776,"88.58 DMEpSPTKLDVTLAK b4/y11 ,70.52 DMESPpTKLDVTLAK b6/y9 ,26.12 DMESPTKLDVpTLAK b11/y4 ,","K","D","88.58 DMEpSPTKLDVTLAK b4/y11 ,",-777.777,"S280",1,"NaN",0,"NaN",0,"DMEpSPTKLDVTLAK","pept13887488",1]
["IPI00008918","Tax_Id=9606 Gene_Symbol=LIMA1 Isoform Beta of LIM domain       and actin-binding protein 1","ETPHSPGVEDAPIAK",1626.7312,2,46,1626.729,11.8,"1pST",250,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_5.raw",46,3415,6204,82.5791,"55.60 EpTPHSPGVEDAPIAK b2/y14 ,82.58 ETPHpSPGVEDAPIAK b5/y11 ,","R","V","82.58 ETPHpSPGVEDAPIAK b5/y11 ,",-777.777,"S490",1,"NaN",0,"NaN",0,"ETPHpSPGVEDAPIAK","pept13887501",1]
["IPI00007764","Tax_Id=9606 Gene_Symbol=HN1 Isoform 1 of Hematological and       neurological expressed 1 protein","RNSSEASSGDFLDLK",1704.7389,2,36,1704.7356,9.4,"1pST",116,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",36,7030,6142,93.9771,"93.98 RNpSSEASSGDFLDLK b3/y13 ,93.98 RNSpSEASSGDFLDLK b4/y12 ,61.24 RNSSEApSSGDFLDLK b7/y9 ,53.69 RNSSEASpSGDFLDLK b8/y8 ,","R","G","93.98 RNpSSEASSGDFLDLK b3/y13 ,93.98 RNSpSEASSGDFLDLK b4/y12 ,",-777.777,"S87;S88",2,"NaN",0,"NaN",0,"RN(p)S(p)SEASSGDFLDLK","pept14811324",1]
["IPI00165041","Tax_Id=9606 Gene_Symbol=TCOF1 Treacher       Collins-Franceschetti syndrome 1 isoform a","LGAGEGGEASVSPEK",1466.6349,2,57,1466.629,19.1,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",57,2800,7042,73.522,"58.02 LGAGEGGEApSVSPEK b10/y6 ,73.52 LGAGEGGEASVpSPEK b12/y4 ,","K","T","73.52 LGAGEGGEASVpSPEK b12/y4 ,",-777.777,"S1340",1,"NaN",0,"NaN",0,"LGAGEGGEASVpSPEK","pept98221732",1]
["IPI00012340","Tax_Id=9606 Gene_Symbol=SFRS9 Splicing factor,       arginine/serine-rich 9","GSPHYFSPFRPY",1533.6434,2,37,1533.6442,22.3,"1pST",35,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",37,8122,3833,97.1656,"97.17 GpSPHYFSPFRPY b2/y11 ,39.09 GSPHYFpSPFRPY b7/y6 ,","R","-","97.17 GpSPHYFSPFRPY b2/y11 ,",-777.777,"S211",1,"NaN",0,"NaN",0,"GpSPHYFSPFRPY","pept14422627",1]
["IPI00220113","Tax_Id=9606 Gene_Symbol=MAP4 Isoform 2 of       Microtubule-associated protein 4","DVTPPPETEVVLIK",1615.8044,2,34,1615.811,24.9,"1pST",241,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",34,8955,7887,100.6013,"100.60 DVpTPPPETEVVLIK b3/y12 ,66.90 DVTPPPEpTEVVLIK b8/y7 ,","K","N","100.60 DVpTPPPETEVVLIK b3/y12 ,",-777.777,"NaN",0,"T521",1,"NaN",0,"DVpTPPPETEVVLIK","pept98221743",1]
["IPI00012442","Tax_Id=9606 Gene_Symbol=G3BP1 Ras GTPase-activating       protein-binding protein 1","SSSPAPADIAQTVQEDLR",1963.883,2,51,1963.8888,6.5,"1pST",125,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",51,11094,10552,85.7844,"77.06 pSSSPAPADIAQTVQEDLR b1/y18 ,77.83 SpSSPAPADIAQTVQEDLR b2/y17 ,85.78 SSpSPAPADIAQTVQEDLR b3/y16 ,27.08 SSSPAPADIAQpTVQEDLR b12/y7 ,","K","T","85.78 SSpSPAPADIAQTVQEDLR b3/y16 ,",-777.777,"S232",1,"NaN",0,"NaN",0,"SSpSPAPADIAQTVQEDLR","pept98221721",1]
["IPI00070809","Tax_Id=9606 Gene_Symbol=CDC2L2 Isoform SV1 of PITSLRE       serine/threonine-protein kinase CDC2L2","DLLSDLQDISDSER",1684.7124,2,31,1684.7193,15.1,"1pST",395,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",31,11516,8508,106.6236,"28.50 DLLpSDLQDISDSER b4/y11 ,106.62 DLLSDLQDIpSDSER b10/y5 ,88.08 DLLSDLQDISDpSER b12/y3 ,","R","K","106.62 DLLSDLQDIpSDSER b10/y5 ,",-777.777,"S268",1,"NaN",0,"NaN",0,"DLLSDLQDIpSDSER","pept98221784",1]
["IPI00165041","Tax_Id=9606 Gene_Symbol=TCOF1 Treacher       Collins-Franceschetti syndrome 1 isoform a","LGAGEGGEASVSPEK",1466.6305,2,67,1466.629,21.3,"1pST",179,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",67,2793,7037,71.4749,"62.93 LGAGEGGEApSVSPEK b10/y6 ,71.47 LGAGEGGEASVpSPEK b12/y4 ,","K","T","71.47 LGAGEGGEASVpSPEK b12/y4 ,",-777.777,"S1340",1,"NaN",0,"NaN",0,"LGAGEGGEASVpSPEK","pept98221731",1]
["IPI00007764","Tax_Id=9606 Gene_Symbol=HN1 Isoform 1 of Hematological and       neurological expressed 1 protein","RNSSEASSGDFLDLK",1704.7309,2,39,1704.7356,4.8,"1pST",116,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",39,7040,6138,102.0517,"102.05 RNpSSEASSGDFLDLK b3/y13 ,102.05 RNSpSEASSGDFLDLK b4/y12 ,60.49 RNSSEApSSGDFLDLK b7/y9 ,68.35 RNSSEASpSGDFLDLK b8/y8 ,","R","G","102.05 RNpSSEASSGDFLDLK b3/y13 ,102.05 RNSpSEASSGDFLDLK b4/y12 ,",-777.777,"S87;S88",2,"NaN",0,"NaN",0,"RN(p)S(p)SEASSGDFLDLK","pept14811326",1]
["IPI00012340","Tax_Id=9606 Gene_Symbol=SFRS9 Splicing factor,       arginine/serine-rich 9","GSPHYFSPFRPY",1533.6484,2,48,1533.6442,33.3,"1pST",35,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_50.raw",48,8095,3835,94.5659,"94.57 GpSPHYFSPFRPY b2/y11 ,30.34 GSPHYFpSPFRPY b7/y6 ,","R","-","94.57 GpSPHYFSPFRPY b2/y11 ,",-777.777,"S211",1,"NaN",0,"NaN",0,"GpSPHYFSPFRPY","pept14422625",1]
["IPI00011118","Tax_Id=9606 Gene_Symbol=RRM2 Ribonucleoside-diphosphate       reductase subunit M2","VPLAPITDPQQLQLSPLK",2037.0833,2,39,2037.0911,35.6,"1pST",333,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",39,12009,11009,105.4656,"58.25 VPLAPIpTDPQQLQLSPLK b7/y12 ,105.47 VPLAPITDPQQLQLpSPLK b15/y4 ,","R","G","105.47 VPLAPITDPQQLQLpSPLK b15/y4 ,",-777.777,"S80",1,"NaN",0,"NaN",0,"VPLAPITDPQQLQLpSPLK","pept98221770",1]
["IPI00030968","Tax_Id=9606 Gene_Symbol=C9orf142 Isoform 1 of       Uncharacterized protein C9orf142","LAAAEETAVSPR",1293.6019,2,46,1293.5966,27,"1pST",283,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",46,3096,6145,98.5144,"45.25 LAAAEEpTAVSPR b7/y6 ,98.51 LAAAEETAVpSPR b10/y3 ,","R","K","98.51 LAAAEETAVpSPR b10/y3 ,",-777.777,"S148",1,"NaN",0,"NaN",0,"LAAAEETAVpSPR","pept98221758",1]
["IPI00021812","Tax_Id=9606 Gene_Symbol=AHNAK Neuroblast       differentiation-associated protein AHNAK","ASLGSLEGEAEAEASSPK",1811.7717,2,65,1811.7826,14.4,"1pST",1,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",65,7456,9479,79.6149,"9.38 ApSLGSLEGEAEAEASSPK b2/y17 ,12.71 ASLGpSLEGEAEAEASSPK b5/y14 ,72.31 ASLGSLEGEAEAEApSSPK b15/y4 ,79.61 ASLGSLEGEAEAEASpSPK b16/y3 ,","K","G","79.61 ASLGSLEGEAEAEASpSPK b16/y3 ,",-777.777,"S5763",1,"NaN",0,"NaN",0,"ASLGSLEGEAEAEASpSPK","pept98221689",1]
["IPI00008529","Tax_Id=9606 Gene_Symbol=RPLP2 60S acidic ribosomal protein       P2","KEESEESDDDMGFGLFD",2108.6781,2,31,2108.6847,31.1,"2pST",73,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",31,13173,11446,119.2694,"119.27 KEEpSEEpSDDDMGFGLFD b4/y14 b7/y11 ,","K","-","119.27 KEEpSEEpSDDDMGFGLFD b4/y14 b7/y11 ,",-777.777,"S102;S105",2,"NaN",0,"NaN",0,"KEEpSEEpSDDDMGFGLFD","pept98221717",1]
["IPI00030968","Tax_Id=9606 Gene_Symbol=C9orf142 Isoform 1 of       Uncharacterized protein C9orf142","LAAAEETAVSPR",1293.5936,2,42,1293.5966,25,"1pST",283,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",42,2958,6142,111.9835,"72.79 LAAAEEpTAVSPR b7/y6 ,111.98 LAAAEETAVpSPR b10/y3 ,","R","K","111.98 LAAAEETAVpSPR b10/y3 ,",-777.777,"S148",1,"NaN",0,"NaN",0,"LAAAEETAVpSPR","pept98221757",1]
["IPI00018274","Tax_Id=9606 Gene_Symbol=EGFR Isoform 1 of Epidermal growth       factor receptor","ELVEPLTPSGEAPNQALLR",2113.0362,2,38,2113.0456,14.2,"1pST",334,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",38,9475,11480,116.592,"116.59 ELVEPLpTPSGEAPNQALLR b7/y13 ,98.67 ELVEPLTPpSGEAPNQALLR b9/y11 ,","R","I","116.59 ELVEPLpTPSGEAPNQALLR b7/y13 ,",-777.777,"NaN",0,"T693",1,"NaN",0,"ELVEPLpTPSGEAPNQALLR","pept98221773",1]
["IPI00023780","Tax_Id=9606 Gene_Symbol=DNAJC5 Isoform 2 of DnaJ homolog       subfamily C member 5","SLSTSGESLYHVLGLDK",1884.8789,2,58,1884.887,0.1,"1pST",105,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_10.raw",58,11911,6957,102.0517,"89.95 pSLSTSGESLYHVLGLDK b1/y17 ,102.05 SLpSTSGESLYHVLGLDK b3/y15 ,76.56 SLSpTSGESLYHVLGLDK b4/y14 ,68.35 SLSTpSGESLYHVLGLDK b5/y13 ,53.01 SLSTSGEpSLYHVLGLDK b8/y10 ,","R","N","102.05 SLpSTSGESLYHVLGLDK b3/y15 ,",-777.777,"S10",1,"NaN",0,"NaN",0,"SLpSTSGESLYHVLGLDK","pept14811322",1]
["IPI00003419","Tax_Id=9606 Gene_Symbol=C11orf58 Small acidic     protein","SASPDDDLGSSNWEAADLGNEER",2513.9767,2,59,2513.982,0,"1pST",66,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",59,8240,13037,101.5872,"93.14 pSASPDDDLGSSNWEAADLGNEER b1/y23 ,101.59 SApSPDDDLGSSNWEAADLGNEER b3/y21 ,58.25 SASPDDDLGpSSNWEAADLGNEER b10/y14 ,51.32 SASPDDDLGSpSNWEAADLGNEER b11/y13 ,","R","K","101.59 SApSPDDDLGSSNWEAADLGNEER b3/y21 ,",-777.777,"S17",1,"NaN",0,"NaN",0,"SApSPDDDLGSSNWEAADLGNEER","pept98221713",1]
["IPI00012442","Tax_Id=9606 Gene_Symbol=G3BP1 Ras GTPase-activating       protein-binding protein 1","SSSPAPADIAQTVQEDLR",1963.8819,2,69,1963.8888,0,"1pST",125,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",69,11101,10548,96.7664,"86.62 pSSSPAPADIAQTVQEDLR b1/y18 ,87.48 SpSSPAPADIAQTVQEDLR b2/y17 ,96.77 SSpSPAPADIAQTVQEDLR b3/y16 ,45.81 SSSPAPADIAQpTVQEDLR b12/y7 ,","K","T","96.77 SSpSPAPADIAQTVQEDLR b3/y16 ,",-777.777,"S232",1,"NaN",0,"NaN",0,"SSpSPAPADIAQTVQEDLR","pept98221722",1]
["IPI00216049","Tax_Id=9606 Gene_Symbol=HNRNPK Isoform 1 of Heterogeneous       nuclear ribonucleoprotein K","GSYGDLGGPIITTQVTIPK",1995.9833,2,48,1995.9918,42.2,"1pST",28,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",48,11098,10724,137.9416,"137.94 GpSYGDLGGPIITTQVTIPK b2/y18 ,43.73 GSYGDLGGPIIpTTQVTIPK b12/y8 ,26.40 GSYGDLGGPIITpTQVTIPK b13/y7 ,10.71 GSYGDLGGPIITTQVpTIPK b16/y4 ,","R","D","137.94 GpSYGDLGGPIITTQVTIPK b2/y18 ,",-777.777,"S379",1,"NaN",0,"NaN",0,"GpSYGDLGGPIITTQVTIPK","pept98221698",1]
["IPI00011118","Tax_Id=9606 Gene_Symbol=RRM2 Ribonucleoside-diphosphate       reductase subunit M2","VPLAPITDPQQLQLSPLK",2037.0851,2,34,2037.0911,26,"1pST",333,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",34,12014,11012,155.5166,"83.55 VPLAPIpTDPQQLQLSPLK b7/y12 ,155.52 VPLAPITDPQQLQLpSPLK b15/y4 ,","R","G","155.52 VPLAPITDPQQLQLpSPLK b15/y4 ,",-777.777,"S80",1,"NaN",0,"NaN",0,"VPLAPITDPQQLQLpSPLK","pept98221771",1]
["IPI00022145","Tax_Id=9606 Gene_Symbol=NUCKS1 Isoform 1 of Nuclear       ubiquitous casein and cyclin-dependent kinases substrate","VVDYSQFQESDDADEDYGR",2316.8614,2,31,2316.8696,19.5,"1pST",251,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",31,5953,12447,161.1971,"102.65 VVDYpSQFQESDDADEDYGR b5/y15 ,161.20 VVDYSQFQEpSDDADEDYGR b10/y10 ,","K","D","161.20 VVDYSQFQEpSDDADEDYGR b10/y10 ,",-777.777,"S19",1,"NaN",0,"NaN",0,"VVDYSQFQEpSDDADEDYGR","pept98221749",1]
["IPI00008529","Tax_Id=9606 Gene_Symbol=RPLP2 60S acidic ribosomal protein       P2","KEESEESDDDMGFGLFD",2108.6815,2,40,2108.6847,38.7,"2pST",73,"J:\\gf\\NL_2DLC_GF081219\\A549\\NL_2D_A549_1219_0.raw",40,13178,11448,158.3112,"158.31 KEEpSEEpSDDDMGFGLFD b4/y14 b7/y11 ,","K","-","158.31 KEEpSEEpSDDDMGFGLFD b4/y14 b7/y11 ,",-777.777,"S102;S105",2,"NaN",0,"NaN",0,"KEEpSEEpSDDDMGFGLFD","pept98221719",1]