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["Supplementary table 2: The quantitative analysis evaluated using semiquantitative method i.e.by the number of peptide hits of each identified protein for abundance profilings as described [1]. * The differential ratio observed to be increased or decreased (change > 1.1) considered as the protein differentially expressed. \"#DIV/0!\" indicated proteins unique to MHCC97H or Chang liver cells. Average value of peptide hits was from three experiments."]
["IPI","Gene_Symbol"," Differential ratio of peptide hits (MHCC97H/Chang Liver)","Differential ratio of peptide hits (Chang Liver/MHCC97H)","   "]
["IPI00554648.3","KRT8 Keratin, type II cytoskeletal 8",11,{"$nulls":10},"   "]
["IPI00021812.2","AHNAK Neuroblast differentiation-associated protein AHNAK",7.58,null,"   ",{"$nulls":8},"   "]
["IPI00479145.2","KRT19 Keratin, type I cytoskeletal 19",5.24,null,"   ",{"$nulls":8},"   "]
["IPI00022774.3","VCP Transitional endoplasmic reticulum ATPase",4.5,null,"   ",{"$nulls":8},"   "]
["IPI00013808.1","ACTN4 Alpha-actinin-4",4.24,null,"   ",{"$nulls":8},"   "]
["IPI00554788.5","KRT18 Keratin, type I cytoskeletal 18",3.86,{"$nulls":10},"   "]
["IPI00027463.1","S100A6 Protein S100-A6",3.84,{"$nulls":10},"   "]
["IPI00013508.5","ACTN1 Alpha-actinin-1",3.29,{"$nulls":10},"   "]
["IPI00003935.6","HIST2H2BE Histone H2B type 2-E",2.84,null,"   ",{"$nulls":8},"   "]
["IPI00304596.3","NONO Non-POU domain-containing octamer-binding protein",2.62,{"$nulls":10},"   "]
["IPI00014898.2","PLEC1 Isoform 1 of Plectin-1",2.53,{"$nulls":10},"   "]
["IPI00017870.1","Keratin-8-like protein 1   ",2.5,{"$nulls":10},"   "]
["IPI00329801.12","ANXA5 Annexin A5",2.5,{"$nulls":10},"   "]
["IPI00031420.3","UGDH UDP-glucose 6-dehydrogenase",2.37,null,"   ",{"$nulls":8},"   "]
["IPI00784154.1","HSPD1 60 kDa heat shock protein, mitochondrial precursor",2.34,null,"   ",{"$nulls":8},"   "]
["IPI00015911.1","DLD Dihydrolipoyl dehydrogenase, mitochondrial precursor",2.25,{"$nulls":10},"   "]
["IPI00000230.6","TPM1 tropomyosin 1 alpha chain isoform 2 ",2.17,{"$nulls":10},"   "]
["IPI00021263.3","YWHAZ 14-3-3 protein zeta/delta",2.17,{"$nulls":10},"   "]
["IPI00023860.1","NAP1L1 Nucleosome assembly protein 1-like 1",2,{"$nulls":10},"   "]
["IPI00215719.6","RPL18 60S ribosomal protein L18",2,{"$nulls":10},"   "]
["IPI00025796.3","NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial precursor",2,null,"   ",{"$nulls":8},"   "]
["IPI00298994.6","TLN1 Talin-1",1.87,null,"   ",{"$nulls":8},"   "]
["IPI00413641.7","AKR1B1 Aldose reductase ",1.84,null,"   ",{"$nulls":8},"   "]
["IPI00014230.1","C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial precursor",1.84,null,"   ",{"$nulls":8},"   "]
["IPI00291006.1","MDH2 Malate dehydrogenase, mitochondrial precursor",1.8,null,"   ",{"$nulls":8},"   "]
["IPI00289334.1","FLNB Isoform 1 of Filamin-B",1.75,{"$nulls":10},"   "]
["IPI00304925.5","HSPA1A;HSPA1B Heat shock 70 kDa protein 1",1.75,null,"   ",{"$nulls":8},"   "]
["IPI00013860.3","HIBADH 3-hydroxyisobutyrate dehydrogenase, mitochondrial precursor",1.72,{"$nulls":10},"   "]
["IPI00076042.2","Short heat shock protein 60 Hsp60s2",1.7,null,"   ",{"$nulls":13},"   "]
["IPI00075248.11","CALM1;CALM3;CALM2 Calmodulin",1.67,null,"   ",{"$nulls":13},"   "]
["IPI00105407.1","AKR1B10 Aldo-keto reductase family 1 member B10 ",1.67,null,"   ",{"$nulls":8},"   "]
["IPI00438229.2","TRIM28 Isoform 1 of Transcription intermediary factor 1-beta",1.67,{"$nulls":10},"   "]
["IPI00011416.2","ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial precursor",1.64]
["IPI00021405.3","LMNA Isoform A of Lamin-A/C",1.58,{"$nulls":15},"   "]
["IPI00027341.1","CAPG Macrophage-capping protein ",1.56,{"$nulls":15},"   "]
["IPI00007427.2","AGR2 AGR2 ",1.56,{"$nulls":15},"   "]
["IPI00000816.1","YWHAE 14-3-3 protein epsilon",1.54,{"$nulls":15},"   "]
["IPI00010810.1","ETFA Electron transfer flavoprotein subunit alpha, mitochondrial precursor",1.5,{"$nulls":15},"   "]
["IPI00884314.1","RNA-directed DNA polymerase (Reverse transcriptase), related domain containing protein",1.5,{"$nulls":15},"   "]
["IPI00176903.2","PTRF Isoform 1 of Polymerase I and transcript release factor",1.5,{"$nulls":15},"   "]
["IPI00025796.3","NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial precursor",1.5,{"$nulls":15},"   "]
["IPI00025086.3","COX5A Cytochrome c oxidase subunit 5A, mitochondrial precursor ",1.5,null,"   ",{"$nulls":13},"   "]
["IPI00026154.2","PRKCSH Glucosidase 2 subunit beta precursor",1.5,{"$nulls":15},"   "]
["IPI00031169.1","RAB2A Ras-related protein Rab-2A",1.5,{"$nulls":15},"   "]
["IPI00011229.1","CTSD Cathepsin D precursor",1.5,null,"   ",{"$nulls":13},"   "]
["IPI00444262.3","NCL cDNA FLJ45706 fis, clone FEBRA2028457, highly similar to Nucleolin",1.5,null,"   ",{"$nulls":13},"   "]
["IPI00003377.1","SFRS7 Isoform 1 of Splicing factor, arginine/serine-rich 7",1.5,null,"   ",{"$nulls":13},"   "]
["IPI00291175.7","VCL Isoform 1 of Vinculin ",1.5,{"$nulls":15},"   "]
["IPI00220740.1","NPM1 Isoform 2 of Nucleophosmin",1.5,{"$nulls":15},"   "]
["IPI00003865.1","HSPA8 Isoform 1 of Heat shock cognate 71 kDa protein",1.47,null,"   ",{"$nulls":13},"   "]
["IPI00383071.1","LOC388642;LOC729708 Triosephosphate isomerase (Fragment)",1.44,{"$nulls":15},"   "]
["IPI00292657.3","LTB4DH NADP-dependent leukotriene B4 12-hydroxydehydrogenase",1.44,null,"   ",{"$nulls":13},"   "]
["IPI00027569.1","HNRNPCL1 Heterogeneous nuclear ribonucleoprotein C-like 1",1.43,null,"   ",{"$nulls":13},"   "]
["IPI00008603.1","ACTA2 Actin, aortic smooth muscle",1.42,null,"   ",{"$nulls":13},"   "]
["IPI00465439.5","ALDOA Fructose-bisphosphate aldolase A",1.42,{"$nulls":15},"   "]
["IPI00219365.3","MSN Moesin",1.4,{"$nulls":15},"   "]
["IPI00302927.6","CCT4 T-complex protein 1 subunit delta",1.36,{"$nulls":15},"   "]
["IPI00220644.8","PKM2 Isoform M1 of Pyruvate kinase isozymes M1/M2",1.36,null,"   ",{"$nulls":12},"N","",""]
["IPI00031556.7","U2AF2 Splicing factor U2AF 65 kDa subunit ",1.34,{"$nulls":15},"   "]
["IPI00418262.4","ALDOC Fructose-bisphosphate aldolase C",1.34,{"$nulls":15},"   "]
["IPI00183695.9","S100A10 Protein S100-A10",1.34,{"$nulls":15},"   "]
["IPI00301277.1","HSPA1L Heat shock 70 kDa protein 1L",1.33,{"$nulls":15},"   "]
["IPI00299573.12","RPL7A 60S ribosomal protein L7a",1.33,{"$nulls":15},"   "]
["IPI00013895.1","S100A11 Protein S100-A11",1.33,null,"   ",{"$nulls":13},"   "]
["IPI00010740.1","SFPQ Isoform Long of Splicing factor, proline- and glutamine-rich",1.33,{"$nulls":15},"   "]
["IPI00017334.1","PHB Prohibitin",1.3,{"$nulls":15},"   "]
["IPI00013933.2","DSP Isoform DPI of Desmoplakin ",1.29,{"$nulls":15},"   "]
["IPI00334190.4","STOML2 Stomatin-like protein 2",1.25,null,"   ",{"$nulls":13},"   "]
["IPI00218914.5","ALDH1A1 Retinal dehydrogenase 1",1.25,{"$nulls":15},"   "]
["IPI00005537.2","MRPL12 39S ribosomal protein L12, mitochondrial precursor",1.24,null,"   ",{"$nulls":13},"   "]
["IPI00021298.1","KRT20 Keratin, type I cytoskeletal 20",1.22,null,"   ",{"$nulls":13},"   "]
["IPI00024919.3","PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial precursor",1.22,null,"   ",{"$nulls":13},"   "]
["IPI00302925.4","CCT8 59 kDa protein",1.22,null,"   ",{"$nulls":13},"   "]
["IPI00025512.2","HSPB1 Heat shock protein beta-1",1.21,{"$nulls":15},"   "]
["IPI00419585.9","PPIA Peptidyl-prolyl cis-trans isomerase A",1.21,null,"   ",{"$nulls":13},"   "]
["IPI00018140.3","SYNCRIP Isoform 1 of Heterogeneous nuclear ribonucleoprotein Q",1.2,{"$nulls":15},"   "]
["IPI00219018.7","GAPDH Glyceraldehyde-3-phosphate dehydrogenase",1.2,{"$nulls":15},"   "]
["IPI00013894.1","STIP1 Stress-induced-phosphoprotein 1",1.17,null,"   ",{"$nulls":13},"   "]
["IPI00003815.3","ARHGDIA Rho GDP-dissociation inhibitor 1",1.15,{"$nulls":15},"   "]
["IPI00217975.4","LMNB1 Lamin-B1",1.15,{"$nulls":15},"   "]
["IPI00386208.1","Gastric-associated differentially-expressed protein YA61P ",1.13,{"$nulls":12},"N",null,null,"   "]
["IPI00000494.6","RPL5 60S ribosomal protein L5",1.12,{"$nulls":15},"   "]
["IPI00216691.5","PFN1 Profilin-1",1.07,{"$nulls":15},"   "]
["IPI00166768.3","TUBA1C TUBA1C protein",1,{"$nulls":15},"   "]
["IPI00220327.3","KRT1 Keratin, type II cytoskeletal 1 ",{"$error":"#DIV/0!"},null,"   ",{"$nulls":8},"   "]
["IPI00005614.6","SPTBN1 Isoform Long of Spectrin beta chain, brain 1 ",{"$error":"#DIV/0!"},{"$nulls":10},"   "]
["IPI00217437.6","TTBK2 Tau-tubulin kinase ",{"$error":"#DIV/0!"},{"$nulls":10},"   "]
["IPI00006663.1","ALDH2 Aldehyde dehydrogenase, mitochondrial precursor ",{"$error":"#DIV/0!"},{"$nulls":10},"   "]
["IPI00018873.1","NAMPT Isoform 1 of Nicotinamide phosphoribosyltransferase ",{"$error":"#DIV/0!"},{"$nulls":10},"   "]
["IPI00032313.1","S100A4 Protein S100-A4 ",{"$error":"#DIV/0!"},{"$nulls":10},"   "]
["IPI00009104.7","RUVBL2 RuvB-like 2",null,{"$error":"#DIV/0!"}]
["IPI00072534.2","UNC45A Isoform 1 of UNC45 homolog A ",null,{"$error":"#DIV/0!"}]
["IPI00027493.1","LOC442497;SLC3A2 4F2 cell-surface antigen heavy chain",null,{"$error":"#DIV/0!"}]
["IPI00028055.4","TMED10 Transmembrane emp24 domain-containing protein 10 precursor ",null,{"$error":"#DIV/0!"}]
["IPI00006865.3","SEC22B Vesicle-trafficking protein SEC22b ",null,{"$error":"#DIV/0!"}]
["IPI00005737.1","SURF4 Isoform 1 of Surfeit locus protein 4",null,{"$error":"#DIV/0!"}]
["IPI00456750.2","FAM129B Niban-like protein 1 ",null,{"$error":"#DIV/0!"}]
["IPI00219682.6","STOM Erythrocyte band 7 integral membrane protein",null,{"$error":"#DIV/0!"}]
["IPI00027626.3","CCT6A T-complex protein 1 subunit zeta",null,{"$error":"#DIV/0!"}]
["IPI00022881.1","CLTCL1 Isoform 1 of Clathrin heavy chain 2 ",null,4.75,"   "]
["IPI00025277.5","PDCD6 Programmed cell death protein 6 ",null,4.08]
["IPI00014177.3","SEPT2 Septin-2 ",null,3.67,"   "]
["IPI00032140.4","SERPINH1 Serpin H1 precursor",null,2.86]
["IPI00218918.5","ANXA1 Annexin A1",null,2.58,"   "]
["IPI00009342.1","IQGAP1 Ras GTPase-activating-like protein IQGAP1",null,2.58]
["IPI00418169.3","ANXA2 annexin A2 isoform 1",null,2.52]
["IPI00783313.2","PYGL Glycogen phosphorylase, liver form",null,2.48,"   "]
["IPI00301263.2","CAD CAD protein",null,2.46,"   "]
["IPI00027192.5","PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 precursor",null,2.45,"   "]
["IPI00002134.4","PSMD5 26S proteasome non-ATPase regulatory subunit 5 ",null,2.33]
["IPI00018398.4","PSMC3 26S protease regulatory subunit 6A",null,2.25]
["IPI00011062.1","CPS1 Isoform 1 of Carbamoyl-phosphate synthase [ammonia], mitochondrial precursor ",null,2.17]
["IPI00020632.4","ASS1 Argininosuccinate synthase ",null,2.17]
["IPI00449049.5","PARP1 Poly [ADP-ribose] polymerase 1",null,2.13,"   "]
["IPI00026781.2","FASN Fatty acid synthase",null,2.13]
["IPI00031522.2","HADHA Trifunctional enzyme subunit alpha, mitochondrial precursor",null,2.11]
["IPI00018206.3","GOT2 Aspartate aminotransferase, mitochondrial precursor",null,2]
["IPI00296053.3","FH Isoform Mitochondrial of Fumarate hydratase, mitochondrial precursor",null,2]
["IPI00007188.5","SLC25A5 ADP/ATP translocase 2",null,2]
["IPI00215719.6","RPL18 60S ribosomal protein L18",null,2]
["IPI00028031.2","ACADVL Isoform 1 of Very long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor",null,1.89,"   "]
["IPI00008982.1","ALDH18A1 Isoform Long of Delta-1-pyrroline-5-carboxylate synthetase ",null,1.89]
["IPI00011200.5","PHGDH D-3-phosphoglycerate dehydrogenase ",null,1.84]
["IPI00440493.2","ATP5A1 ATP synthase subunit alpha, mitochondrial precursor",null,1.84]
["IPI00009790.1","PFKP 6-phosphofructokinase type C",null,1.83]
["IPI00219740.3","MCM7 Isoform 2 of DNA replication licensing factor MCM7 ",null,1.75]
["IPI00027442.4","AARS Alanyl-tRNA synthetase, cytoplasmic ",null,1.71,"   "]
["IPI00018350.3","MCM5 DNA replication licensing factor MCM5 ",null,1.67]
["IPI00420014.2","ASCC3L1 Isoform 1 of U5 small nuclear ribonucleoprotein 200 kDa helicase ",null,1.67]
["IPI00027107.5","TUFM Tu translation elongation factor, mitochondrial precursor",null,1.67]
["IPI00007928.4","PRPF8 Pre-mRNA-processing-splicing factor 8 ",null,1.67]
["IPI00010204.1","SFRS3 Splicing factor, arginine/serine-rich 3",null,1.67]
["IPI00012750.3","RPS25 40S ribosomal protein S25 ",null,1.67]
["IPI00026625.1","NUP155 Isoform 1 of Nuclear pore complex protein Nup155",null,1.67]
["IPI00006379.1","NOP5/NOP58 Nucleolar protein 5",null,1.67]
["IPI00008708.5","RSL1D1 Ribosomal L1 domain-containing protein 1",null,1.63,"   "]
["IPI00024915.2","PRDX5 Isoform Mitochondrial of Peroxiredoxin-5, mitochondrial precursor",null,1.56]
["IPI00221088.5","RPS9 40S ribosomal protein S9",null,1.56]
["IPI00009904.1","PDIA4 Protein disulfide-isomerase A4 precursor",null,1.55,"   "]
["IPI00011937.1","PRDX4 Peroxiredoxin-4 ",null,1.55,"   "]
["IPI00010720.1","CCT5 T-complex protein 1 subunit epsilon",null,1.53,"   "]
["IPI00290770.3","CCT3 chaperonin containing TCP1, subunit 3 isoform b",null,1.53]
["IPI00030275.5","TRAP1 Heat shock protein 75 kDa, mitochondrial precursor ",null,1.51,"   "]
["IPI00304596.3","NONO Non-POU domain-containing octamer-binding protein",null,1.5,{"$nulls":9},"   "]
["IPI00027497.5","GPI Glucose-6-phosphate isomerase",null,1.5,{"$nulls":9},"   "]
["IPI00306959.10","KRT7 Keratin, type II cytoskeletal 7",null,1.5,{"$nulls":9},"   "]
["IPI00418471.6","VIM Vimentin ",null,1.5,{"$nulls":9},"   "]
["IPI00299024.9","BASP1 Brain acid soluble protein 1 ",null,1.5,{"$nulls":9},"   "]
["IPI00456969.1","DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 ",null,1.5,{"$nulls":9},"   "]
["IPI00027350.3","PRDX2 Peroxiredoxin-2 ",null,1.5,{"$nulls":9},"   "]
["IPI00414676.6","HSP90AB1 Heat shock protein HSP 90-beta ",null,1.5,{"$nulls":9},"   "]
["IPI00013164.4","PRPH Isoform 1 of Peripherin ",null,1.5,{"$nulls":9},"   "]
["IPI00334627.3","ANXA2P2 Uncharacterized protein ENSP00000329640",null,1.48,{"$nulls":9},"   "]
["IPI00072377.1","SET Isoform 1 of Protein SET",null,1.43,"   ",{"$nulls":8},"   "]
["IPI00303476.1","ATP5B ATP synthase subunit beta, mitochondrial precursor",null,1.38,"   ",{"$nulls":8},"   "]
["IPI00217966.7","LDHA Isoform 1 of L-lactate dehydrogenase A chain",null,1.34,{"$nulls":9},"   "]
["IPI00465248.5","ENO1 Isoform alpha-enolase of Alpha-enolase",null,1.33,{"$nulls":9},"   "]
["IPI00025491.1","EIF4A1 Eukaryotic initiation factor 4A-I",null,1.32,{"$nulls":9},"   "]
["IPI00000874.1","PRDX1 Peroxiredoxin-1",null,1.31,"   ",{"$nulls":8},"   "]
["IPI00299571.5","PDIA6 Isoform 2 of Protein disulfide-isomerase A6 precursor",null,1.29,{"$nulls":9},"   "]
["IPI00025252.1","PDIA3 Protein disulfide-isomerase A3 precursor",null,1.23,{"$nulls":9},"   "]
["IPI00012048.1","NME1 Nucleoside diphosphate kinase A",null,1.2,{"$nulls":9},"   "]
["IPI00006510.1","TUBB1 Tubulin beta-1 chain",null,1.17,{"$nulls":9},"   "]
["IPI00382470.3","HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 isoform 1",null,1.15,"   ",{"$nulls":8},"   "]
["IPI00007750.1","TUBA4A Tubulin alpha-4A chain",null,1.1,"   ",{"$nulls":8},"   "]
["IPI00550363.3","TAGLN2 Transgelin-2",null,1,{"$nulls":9},"   "]
["[1] Gao J, Opiteck GJ, Friedrichs MS, Dongre AR, Hefta SA. Changes in the protein expression of yeast as a function of carbon source. J Proteome Res 2003;2:643."]

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