# Supplementary Material (ESI) for Organic & Biomolecular Chemistry # This journal is © The Royal Society of Chemistry 2003 data_global _publ_contact_author_email LKOZ@ICHO.EDU.PL _publ_contact_author_name 'Prof Lech Kozerski' _journal_name_full Org.Biomol.Chem. _journal_coden_Cambridge 0177 _publ_contact_author_address ; Institute of Organic Chemistry Polish Academy of Sciences Kasprzaka 44 Warsaw 01-224 POLAND ; _publ_section_title ; Genistein complexes with amines. Evaluation of the potential for biological function of the C-7, C-5, C-4'-OH groups studied in solution and solid state by 13C NMR and X-ray ; loop_ _publ_author_name 'Lech Kozerski' E.Bednarek W.Bocian P.E.Hansen B.Kamienski ; R.Kawecki ; K.T.Nielsen 'Jerzy Sitkowski' Z.Urbanczyk-Lipkowska 'K. Zakrzewska' data_ok _database_code_CSD 212666 _audit_creation_method SHELXL-97 _chemical_name_systematic ; ? ; _chemical_name_common ? _chemical_melting_point ? _chemical_formula_moiety ? _chemical_formula_sum 'C19 H24.50 N2 O7.50' _chemical_formula_weight 400.91 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' _symmetry_cell_setting ? _symmetry_space_group_name_H-M ? loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' '-x, -y, -z' 'x-1/2, y, -z-1/2' 'x, -y-1/2, z-1/2' '-x-1/2, y-1/2, z' _cell_length_a 6.8220(10) _cell_length_b 23.501(5) _cell_length_c 23.730(5) _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_volume 3804.5(13) _cell_formula_units_Z 8 _cell_measurement_temperature 293(2) _cell_measurement_reflns_used 15 _cell_measurement_theta_min 17.1 _cell_measurement_theta_max 23.5 _exptl_crystal_description ? _exptl_crystal_colour colorless _exptl_crystal_size_max 0.21 _exptl_crystal_size_mid 0.14 _exptl_crystal_size_min 0.14 _exptl_crystal_density_meas ? _exptl_crystal_density_diffrn 1.400 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 1700 _exptl_absorpt_coefficient_mu 0.915 _exptl_absorpt_correction_type none _exptl_absorpt_correction_T_min ? _exptl_absorpt_correction_T_max ? _exptl_absorpt_process_details ? _exptl_special_details ; ? ; _diffrn_ambient_temperature 150.0(1) _diffrn_radiation_wavelength 1.54178 _diffrn_radiation_type CuK\a _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_monochromator graphite _diffrn_measurement_device_type MACH3 _diffrn_measurement_method omega/2theta _diffrn_detector_area_resol_mean ? _diffrn_standards_number 3 _diffrn_standards_interval_count 100 _diffrn_standards_interval_time 3600s _diffrn_standards_decay_% 26.1 _diffrn_reflns_number 3026 _diffrn_reflns_av_R_equivalents 0.0707 _diffrn_reflns_av_sigmaI/netI 0.0730 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_h_max 0 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_k_max 24 _diffrn_reflns_limit_l_min -25 _diffrn_reflns_limit_l_max 23 _diffrn_reflns_theta_min 3.73 _diffrn_reflns_theta_max 56.99 _reflns_number_total 1860 _reflns_number_gt 1705 _reflns_threshold_expression >2sigma(I) _computing_data_collection 'EXPRESS, Nonius BV' _computing_cell_refinement 'EXPRESS, Nonius BV' _computing_data_reduction 'OpenMoleN, Nonius BV' _computing_structure_solution ? _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_molecular_graphics ? _computing_publication_material ? _refine_special_details ; Refinement of F^2^ against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F^2^, conventional R-factors R are based on F, with F set to zero for negative F^2^. The threshold expression of F^2^ > 2sigma(F^2^) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F^2^ are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. ; _refine_ls_structure_factor_coef Fsqd _refine_ls_matrix_type full _refine_ls_weighting_scheme calc _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0423P)^2^+7.4402P] where P=(Fo^2^+2Fc^2^)/3' _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _atom_sites_solution_hydrogens geom _refine_ls_hydrogen_treatment mixed _refine_ls_extinction_method none _refine_ls_extinction_coef ? _refine_ls_number_reflns 1860 _refine_ls_number_parameters 292 _refine_ls_number_restraints 1 _refine_ls_R_factor_all 0.0718 _refine_ls_R_factor_gt 0.0643 _refine_ls_wR_factor_ref 0.1520 _refine_ls_wR_factor_gt 0.1467 _refine_ls_goodness_of_fit_ref 1.257 _refine_ls_restrained_S_all 1.257 _refine_ls_shift/su_max 0.090 _refine_ls_shift/su_mean 0.007 loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group O3 O 0.1237(17) 0.0083(4) 0.5045(5) 0.068(3) Uani 0.50 1 d PD . . H5 H 0.875(10) 0.313(2) 0.267(2) 0.046(19) Uiso 1 1 d . . . H18 H 0.873(11) 0.386(3) -0.082(3) 0.05(2) Uiso 1 1 d . . . H19 H 0.443(11) 0.869(3) 0.365(3) 0.06(2) Uiso 1 1 d . . . H20' H 0.491(10) 1.057(3) 0.355(2) 0.04(2) Uiso 1 1 d . . . H20 H 0.301(15) 1.034(3) 0.356(4) 0.09(3) Uiso 1 1 d . . . H20A H 0.052(14) 0.120(4) 0.670(4) 0.10(3) Uiso 1 1 d . . . H20B H 0.231(12) 0.098(3) 0.650(3) 0.06(2) Uiso 1 1 d . . . H21A H 0.479(14) 0.990(4) 0.158(3) 0.09(3) Uiso 1 1 d . . . H21B H 0.415(15) 1.050(4) 0.149(4) 0.11(3) Uiso 1 1 d . . . H31 H 0.160(15) 0.033(3) 0.475(3) 0.01(3) Uiso 0.50 1 d PD . . C1' C 0.8460(8) 0.2807(2) 0.0806(2) 0.0183(13) Uani 1 1 d . . . C2 C 0.7663(8) 0.1876(2) 0.1238(2) 0.0173(12) Uani 1 1 d . . . H7 H 0.7527 0.1745 0.0870 0.021 Uiso 1 1 calc R . . C2' C 0.7049(8) 0.2860(2) 0.0380(2) 0.0176(13) Uani 1 1 d . . . H13 H 0.5900 0.2648 0.0402 0.021 Uiso 1 1 calc R . . C2" C 0.3957(10) 0.9355(2) 0.4119(2) 0.0373(16) Uani 1 1 d . . . H94A H 0.4345 0.9169 0.4467 0.045 Uiso 1 1 calc R . . H94B H 0.2537 0.9366 0.4104 0.045 Uiso 1 1 calc R . . C3' C 0.7331(8) 0.3222(2) -0.0075(2) 0.0198(13) Uani 1 1 d . . . H14 H 0.6380 0.3251 -0.0355 0.024 Uiso 1 1 calc R . . C3 C 0.8140(7) 0.2428(2) 0.1309(2) 0.0172(13) Uani 1 1 d . . . C3" C 0.4779(10) 0.9956(2) 0.4100(2) 0.0318(15) Uani 1 1 d . . . H95A H 0.4248 1.0175 0.4411 0.038 Uiso 1 1 calc R . . H95B H 0.6193 0.9943 0.4142 0.038 Uiso 1 1 calc R . . C4 C 0.8378(7) 0.2644(2) 0.1883(2) 0.0145(12) Uani 1 1 d . . . C4' C 0.9067(9) 0.3543(2) -0.0110(2) 0.0207(13) Uani 1 1 d . . . C5" C 0.4825(8) 0.9893(2) 0.3056(2) 0.0232(14) Uani 1 1 d . . . H97A H 0.6241 0.9884 0.3020 0.028 Uiso 1 1 calc R . . H97B H 0.4293 1.0070 0.2720 0.028 Uiso 1 1 calc R . . C5 C 0.8217(7) 0.2388(2) 0.2911(2) 0.0127(12) Uani 1 1 d . . . C5' C 1.0508(8) 0.3485(2) 0.0307(2) 0.0202(13) Uani 1 1 d . . . H16 H 1.1669 0.3691 0.0280 0.024 Uiso 1 1 calc R . . C6' C 1.0209(8) 0.3122(2) 0.0757(2) 0.0187(13) Uani 1 1 d . . . H17 H 1.1175 0.3085 0.1031 0.022 Uiso 1 1 calc R . . C6" C 0.4043(9) 0.9288(2) 0.3107(2) 0.0276(14) Uani 1 1 d . . . H98A H 0.2621 0.9293 0.3103 0.033 Uiso 1 1 calc R . . H98B H 0.4491 0.9062 0.2790 0.033 Uiso 1 1 calc R . . C6 C 0.7916(7) 0.1995(2) 0.3332(2) 0.0136(12) Uani 1 1 d . . . H3 H 0.8056 0.2102 0.3707 0.016 Uiso 1 1 calc R . . C7 C 0.7390(7) 0.1426(2) 0.3195(2) 0.0150(12) Uani 1 1 d . . . C8 C 0.7185(7) 0.1278(2) 0.2623(2) 0.0151(12) Uani 1 1 d . . . H1 H 0.6814 0.0911 0.2525 0.018 Uiso 1 1 calc R . . C9 C 0.7531(8) 0.1674(2) 0.22113(19) 0.0140(11) Uiso 1 1 d . . . C10 C 0.8049(8) 0.2245(2) 0.23335(19) 0.0141(12) Uiso 1 1 d . . . N1" N 0.4733(8) 0.9037(2) 0.3630(2) 0.0332(13) Uani 1 1 d . . . N4" N 0.4276(8) 1.0238(2) 0.3560(2) 0.0238(12) Uani 1 1 d . . . O1 O 0.7365(5) 0.14943(13) 0.16596(13) 0.0157(8) Uani 1 1 d . . . O4' O 0.9424(6) 0.39262(16) -0.05312(16) 0.0303(11) Uani 1 1 d . . . O4 O 0.8824(5) 0.31574(14) 0.19833(14) 0.0212(9) Uani 1 1 d . . . O5 O 0.8730(5) 0.29324(14) 0.30586(15) 0.0196(9) Uani 1 1 d . . . O7 O 0.7115(5) 0.10440(13) 0.36006(13) 0.0186(9) Uani 1 1 d . . . O2 O 0.1191(7) 0.08619(17) 0.66601(19) 0.0319(11) Uani 1 1 d . . . O6 O 0.5209(6) 1.02367(19) 0.16364(18) 0.0280(10) Uani 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O3 0.063(7) 0.047(6) 0.093(8) 0.011(6) -0.001(7) 0.004(6) C1' 0.020(3) 0.015(3) 0.020(3) 0.000(2) 0.006(3) 0.005(3) C2 0.011(3) 0.027(3) 0.014(2) -0.001(2) 0.001(2) 0.005(3) C2' 0.017(3) 0.016(3) 0.020(3) 0.000(2) -0.005(3) 0.000(3) C2" 0.038(4) 0.036(4) 0.037(4) 0.011(3) 0.005(3) -0.008(3) C3' 0.015(3) 0.025(3) 0.019(3) 0.000(2) -0.006(3) 0.002(3) C3 0.003(3) 0.029(3) 0.020(3) 0.001(2) -0.001(2) 0.003(3) C3" 0.034(4) 0.033(3) 0.028(3) 0.006(3) -0.002(3) -0.011(3) C4 0.014(3) 0.014(3) 0.029(3) 0.003(2) -0.002(2) 0.002(2) C4' 0.030(4) 0.017(3) 0.015(3) 0.000(2) 0.003(3) 0.005(3) C5" 0.011(3) 0.029(3) 0.030(3) 0.000(3) -0.003(3) -0.005(3) C5 0.004(3) 0.010(3) 0.024(3) -0.003(2) -0.002(2) 0.003(2) C5' 0.015(3) 0.024(3) 0.021(3) 0.001(2) -0.001(3) -0.006(3) C6' 0.015(3) 0.024(3) 0.017(3) 0.000(2) -0.003(3) 0.002(3) C6" 0.014(3) 0.026(3) 0.043(4) -0.006(3) 0.007(3) -0.001(3) C6 0.007(3) 0.015(3) 0.019(3) -0.004(2) -0.001(2) 0.002(2) C7 0.001(3) 0.020(3) 0.024(3) 0.008(2) 0.002(2) 0.004(2) C8 0.002(3) 0.016(3) 0.027(3) 0.003(2) -0.002(2) 0.001(2) N1" 0.028(3) 0.017(3) 0.054(3) 0.010(3) 0.005(3) -0.004(3) N4" 0.023(3) 0.015(3) 0.033(3) -0.005(2) 0.002(3) -0.004(2) O1 0.0106(19) 0.0160(18) 0.0203(18) 0.0006(15) 0.0001(17) -0.0012(16) O4' 0.032(3) 0.035(2) 0.024(2) 0.007(2) -0.006(2) -0.003(2) O4 0.020(2) 0.016(2) 0.028(2) 0.0018(16) 0.0004(18) -0.0025(17) O5 0.018(2) 0.016(2) 0.025(2) -0.0016(16) 0.0010(18) -0.0025(17) O7 0.015(2) 0.0176(18) 0.0232(19) 0.0015(16) -0.0005(17) -0.0043(17) O2 0.021(3) 0.018(2) 0.056(3) 0.001(2) 0.006(2) -0.002(2) O6 0.013(2) 0.025(2) 0.046(3) 0.001(2) -0.005(2) 0.000(2) _geom_special_details ; All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. ; loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag O3 O3 1.74(2) 5_556 ? O3 H31 0.93(2) . ? C1' C2' 1.402(7) . ? C1' C6' 1.409(8) . ? C1' C3 1.506(7) . ? C2 C3 1.349(7) . ? C2 O1 1.358(6) . ? C2 H7 0.9300 . ? C2' C3' 1.387(7) . ? C2' H13 0.9300 . ? C2" N1" 1.477(8) . ? C2" C3" 1.521(8) . ? C2" H94A 0.9700 . ? C2" H94B 0.9700 . ? C3' C4' 1.408(8) . ? C3' H14 0.9300 . ? C3 C4 1.462(7) . ? C3" N4" 1.483(7) . ? C3" H95A 0.9700 . ? C3" H95B 0.9700 . ? C4 O4 1.268(6) . ? C4 C10 1.439(7) . ? C4' O4' 1.366(6) . ? C4' C5' 1.402(7) . ? C5" N4" 1.491(7) . ? C5" C6" 1.525(8) . ? C5" H97A 0.9700 . ? C5" H97B 0.9700 . ? C5 O5 1.372(6) . ? C5 C6 1.375(7) . ? C5 C10 1.416(7) . ? C5' C6' 1.383(7) . ? C5' H16 0.9300 . ? C6' H17 0.9300 . ? C6" N1" 1.452(7) . ? C6" H98A 0.9700 . ? C6" H98B 0.9700 . ? C6 C7 1.421(7) . ? C6 H3 0.9300 . ? C7 O7 1.330(6) . ? C7 C8 1.408(7) . ? C8 C9 1.369(7) . ? C8 H1 0.9300 . ? C9 O1 1.380(6) . ? C9 C10 1.419(7) . ? N1" H19 0.85(7) . ? N4" H20' 0.90(7) . ? N4" H20 0.90(10) . ? O4' H18 0.84(7) . ? O5 H5 1.03(6) . ? O2 H20A 0.93(9) . ? O2 H20B 0.90(8) . ? O6 H21A 0.86(9) . ? O6 H21B 1.02(10) . ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O3 O3 H31 108(7) 5_556 . ? C2' C1' C6' 118.4(5) . . ? C2' C1' C3 121.7(5) . . ? C6' C1' C3 119.9(5) . . ? C3 C2 O1 125.4(5) . . ? C3 C2 H7 117.3 . . ? O1 C2 H7 117.3 . . ? C3' C2' C1' 121.4(5) . . ? C3' C2' H13 119.3 . . ? C1' C2' H13 119.3 . . ? N1" C2" C3" 108.3(5) . . ? N1" C2" H94A 110.0 . . ? C3" C2" H94A 110.0 . . ? N1" C2" H94B 110.0 . . ? C3" C2" H94B 110.0 . . ? H94A C2" H94B 108.4 . . ? C2' C3' C4' 119.4(5) . . ? C2' C3' H14 120.3 . . ? C4' C3' H14 120.3 . . ? C2 C3 C4 118.5(5) . . ? C2 C3 C1' 120.3(5) . . ? C4 C3 C1' 121.1(4) . . ? N4" C3" C2" 110.8(5) . . ? N4" C3" H95A 109.5 . . ? C2" C3" H95A 109.5 . . ? N4" C3" H95B 109.5 . . ? C2" C3" H95B 109.5 . . ? H95A C3" H95B 108.1 . . ? O4 C4 C10 121.2(5) . . ? O4 C4 C3 122.1(5) . . ? C10 C4 C3 116.7(4) . . ? O4' C4' C5' 117.1(5) . . ? O4' C4' C3' 123.2(5) . . ? C5' C4' C3' 119.7(5) . . ? N4" C5" C6" 110.8(5) . . ? N4" C5" H97A 109.5 . . ? C6" C5" H97A 109.5 . . ? N4" C5" H97B 109.5 . . ? C6" C5" H97B 109.5 . . ? H97A C5" H97B 108.1 . . ? O5 C5 C6 118.6(4) . . ? O5 C5 C10 119.3(5) . . ? C6 C5 C10 122.1(4) . . ? C6' C5' C4' 120.2(5) . . ? C6' C5' H16 119.9 . . ? C4' C5' H16 119.9 . . ? C5' C6' C1' 120.8(5) . . ? C5' C6' H17 119.6 . . ? C1' C6' H17 119.6 . . ? N1" C6" C5" 109.5(5) . . ? N1" C6" H98A 109.8 . . ? C5" C6" H98A 109.8 . . ? N1" C6" H98B 109.8 . . ? C5" C6" H98B 109.8 . . ? H98A C6" H98B 108.2 . . ? C5 C6 C7 120.3(4) . . ? C5 C6 H3 119.9 . . ? C7 C6 H3 119.9 . . ? O7 C7 C8 121.1(5) . . ? O7 C7 C6 120.4(4) . . ? C8 C7 C6 118.5(4) . . ? C9 C8 C7 120.2(5) . . ? C9 C8 H1 119.9 . . ? C7 C8 H1 119.9 . . ? C8 C9 O1 117.1(4) . . ? C8 C9 C10 122.7(4) . . ? O1 C9 C10 120.2(4) . . ? C5 C10 C9 116.3(4) . . ? C5 C10 C4 123.5(5) . . ? C9 C10 C4 120.2(4) . . ? C6" N1" C2" 110.5(5) . . ? C6" N1" H19 111(5) . . ? C2" N1" H19 111(5) . . ? C3" N4" C5" 113.1(4) . . ? C3" N4" H20' 107(4) . . ? C5" N4" H20' 110(4) . . ? C3" N4" H20 110(5) . . ? C5" N4" H20 113(6) . . ? H20' N4" H20 102(6) . . ? C2 O1 C9 119.0(4) . . ? C4' O4' H18 112(5) . . ? C5 O5 H5 101(3) . . ? H20A O2 H20B 101(7) . . ? H21A O6 H21B 107(8) . . ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O5 H5 O4 1.03(6) 1.64(6) 2.607(5) 156(5) . O4' H18 O7 0.84(7) 1.78(7) 2.594(5) 162(7) 7_565 N1" H19 O5 0.85(7) 2.58(7) 3.112(6) 121(6) 8_765 N4" H20' O7 0.90(7) 1.87(7) 2.711(6) 154(6) 1_565 N4" H20 O6 0.90(10) 1.98(10) 2.814(7) 153(7) 6_556 O2 H20A O4 0.93(9) 2.01(10) 2.917(6) 165(8) 7_466 O2 H20B N1" 0.90(8) 2.04(9) 2.875(7) 153(6) 5_666 O6 H21A O2 0.86(9) 1.91(9) 2.753(6) 166(8) 2_564 O6 H21B O7 1.02(10) 1.89(10) 2.893(5) 167(7) 6_566 O3 H31 O4' 0.93(2) 2.40(9) 2.970(12) 120(8) 7_466 _diffrn_measured_fraction_theta_max 0.725 _diffrn_reflns_theta_full 56.99 _diffrn_measured_fraction_theta_full 0.725 _refine_diff_density_max 0.368 _refine_diff_density_min -0.415 _refine_diff_density_rms 0.068